TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.551638 %AT, 4930682 nt, 34722 terms. Intergenic: 0.618699 %AT, H2T: 587694 nt, 5448 terms; T2T: 191120 nt, 4488 terms; H2H: 250167 nt, 3770 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|170724370|ref|NC_010506.1| Shewanella woodyi ATCC 51908, complete genome (length 5935403) Swoo_0001 397 - 1785 + | chromosomal replication initiator protein DnaA Swoo_0002 1805 - 2905 + | DNA polymerase III, beta subunit TERM 1 2962 - 2947 - f 79 -7.6 -4.25104 | opp_overlap 2947 GTGCTTCTATTAAAA GACTGA TTAT TCAGTC TTTTTTTGTTTCTAC TERM 2 2947 - 2962 + F 100 -7.6 -6.02919 | opp_overlap 2947 GTGCTTCTATTAAAA GACTGA TTAT TCAGTC TTTTTTTGTTTCTAC TERM 3 3407 - 3374 - g 77 -7.5 -4.37502 | gap 1, opp_overlap 3375 AGCAGGAGAGTAAAA TCGGTTTGCGCCGTTT TAG AAGTGGCG-AAACCGA GGTTAAGATCAATGG TERM 4 4026 - 4004 - g 78 -6.4 -4.67697 | TGCTAAAACAACAAA CAGATAAAAA TAG TATTTATCTG GTGGATGATCTTCCA Swoo_0003 3127 - 4224 + | DNA replication and repair protein RecF Swoo_0004 4226 - 6643 + | DNA gyrase, B subunit TERM 5 6723 - 6704 - T 70 -7.8 -3.61438 | opp_overlap 6704, overlap 6702 TTAGATTAAAGAAGA GCCTCAGA GAAA TCTGGGGC TTTTTTATGTCTGGA TERM 6 6704 - 6723 + T 100 -10 -5.4251 | opp_overlap 6704 6702 TTAGATTAAAGAAGA GCCTCAGA GAAA TCTGGGGC TTTTTTATGTCTGGA Swoo_0005 8280 - 7093 - | cytochrome-c peroxidase TERM 7 7901 - 7878 - G 71 -4.6 -4.72272 | gap 1, opp_overlap 7881, overlap 7881 GGTTTTCACCAAAAA TAG-GCAGTAG TAG CTGCTGCTCTA TATCGGTTAACCCAT Swoo_0006 9089 - 8277 - | hypothetical protein TERM 8 8794 - 8808 + g 83 -5.7 -5.1764 | opp_overlap 8789 GAGCGACAATCACTG CCTAG AAGTG CTAGG TTTTTCTGTTGTGTG TERM 9 11538 - 11514 - g 71 -8.5 -3.45768 | GACCATAATTGATAA CGATAGAGCCA ATA CGGCTCCAACG GTCAATGCGGGTGAA Swoo_0007 9178 - 11913 + | Na-Ca exchanger/integrin-beta4 TERM 10 11946 - 11917 - T 84 -11 -3.73936 | opp_overlap 11917 11924, overlap 11924 AAATTCGATTAATAA TAAAAAAGAGAC TTTAAG GTCTCTTTTTTA TTGGGTTTGAATGAT TERM 11 11917 - 11946 + T 84 -11.7 -3.29591 | opp_overlap 11917 11924, overlap 11924 AAATTCGATTAATAA TAAAAAAGAGACT TTAA GGTCTCTTTTTTA TTGGGTTTGAATGAT TERM 12 11924 - 11939 + T 86 -5.4 -5.52096 | opp_overlap 11917 11924, overlap 11917 ATTAATAATAAAAAA GAGACT TTAA GGTCTC TTTTTTATTGGGTTT TERM 13 11939 - 11924 - T 85 -4.7 -5.66229 | opp_overlap 11924 11917, overlap 11917 ATTAATAATAAAAAA GAGAC TTTAAG GTCTC TTTTTTATTGGGTTT Swoo_0008 12684 - 11944 - | LamB/YcsF family protein TERM 14 12714 - 12729 + r 74 -9 -3.53811 | ATTAATATTTTCTAC GAGCCA TCGA TGGCTC TTTGGAGGCGATAAA Swoo_0009 13651 - 12710 - | urea amidolyase related protein Swoo_0010 14328 - 13648 - | allophanate hydrolase subunit 1 Swoo_0011 14533 - 15537 + | putative signal transduction protein TERM 15 15535 - 15571 + T 70 -7.3 -3.72893 | opp_overlap 15544, overlap 15538 15544 AGGTTGAAAATGTTC TAAAAAAAAGCCCCAGT CTA GCTGGGGCTTAATCTTA TTTACTGAAGCAGTG TERM 16 15544 - 15562 + T 90 -12.4 -3.51158 | opp_overlap 15544, overlap 15538 15535 ATGTTCTAAAAAAAA GCCCCAGT CTA GCTGGGGC TTAATCTTATTTACT TERM 17 15562 - 15544 - T 100 -11.7 -5.75945 | opp_overlap 15544 15538 15535 ATGTTCTAAAAAAAA GCCCCAG TCTAG CTGGGGC TTAATCTTATTTACT Swoo_0012 17642 - 15573 - | glycyl-tRNA synthetase, beta subunit TERM 18 16940 - 16960 + g 84 -7.5 -4.92783 | opp_overlap 16927, overlap 16944 CACCACCAATCTTAG CGGCTGCAG CCT CTGCATCTG TTTTTATGATCGCTT TERM 19 17239 - 17257 + g 73 -5.2 -4.61873 | overlap 17228 TCGAGGGCGCGTTGT GCCATGTC ATT GATAAGGC TTTTGGTTTCTACAC Swoo_0013 18517 - 17654 - | glycyl-tRNA synthetase, alpha subunit TERM 20 18496 - 18480 - G 72 -10.1 -2.90901 | opp_overlap 18468 18489 AGAGGTTGAACGATA GCGCAAC CTT GCTGCGC CCAGTATTCCTGCAG Swoo_0014 18724 - 19308 + | DNA-3-methyladenine glycosylase I TERM 21 19329 - 19315 - T 76 -8.6 -3.75005 | overlap 19305 AAAAGCTAAGAAAGA TCCTAG GTA CTAGGA AGGGTATAGGCTGAA TERM 22 19538 - 19561 + T 100 -15.4 -4.81249 | opp_overlap 19538 GCTTATAAATAAAAA GGAGTGTTCC ACGT GGAACACTCC TTTTTACATTTGGAA TERM 23 19561 - 19538 - T 100 -15.4 -5.38054 | opp_overlap 19538 GCTTATAAATAAAAA GGAGTGTTCC ACGT GGAACACTCC TTTTTACATTTGGAA Swoo_0015 22919 - 19710 - | amidohydrolase TERM 24 20932 - 20957 + g 78 -6.1 -4.67353 | opp_overlap 20932 20931, overlap 20937 TTGCCACCGACAAAT GCAACTGTTCC ACGT GGAACATCTGC TTTTTGGGTAAATCC Swoo_0016 23698 - 23231 - | hypothetical protein Swoo_0017 23993 - 23748 - | SirA family protein TERM 25 24110 - 24125 + r 70 -7.6 -3.68351 | opp_overlap 24102 CTCACAAGTGGCAGA TGTTCC ACGT GGAACA TTTAGATGCTAAACC Swoo_0018 24601 - 24134 - | ybaK/ebsC protein Swoo_0019 25097 - 24615 - | GCN5-related N-acetyltransferase TERM 26 25165 - 25187 + r 100 -17.8 -3.95584 | opp_overlap 25165 TACTGTAAATAAAAA CGGCAAGCTC ACA GAGCTTGCCG TTTAGTTAATACCGA TERM 27 25187 - 25165 - R 100 -17.8 -5.28942 | opp_overlap 25165 TACTGTAAATAAAAA CGGCAAGCTC ACA GAGCTTGCCG TTTAGTTAATACCGA Swoo_0020 26397 - 25234 - | acetyl-CoA C-acyltransferase FadA TERM 28 25514 - 25527 + g 79 -3.8 -5.26875 | TCAATTGTTAGGCCT GCAC GCTCAA GTGC TTTTTTGGTTGCAGG Swoo_0021 28569 - 26419 - | fatty oxidation complex, alpha subunit FadB Swoo_0022 28837 - 30156 + | peptidase M24 TERM 29 30226 - 30201 - g 77 -11.3 -2.6062 | opp_overlap 30201, overlap 30200 30198 30203 TTGATCATAGAAGAG GAGATAAAGCA TAGT CGCTTTATCTC TTTTCTTTTTCACTG TERM 30 30201 - 30226 + G 100 -10.6 -5.2853 | opp_overlap 30201 30200 30198 30203 TTGATCATAGAAGAG GAGATAAAGC ATAGTC GCTTTATCTC TTTTCTTTTTCACTG Swoo_0023 30153 - 30788 + | hypothetical protein TERM 31 30915 - 30896 - g 74 -8 -4.09374 | opp_overlap 30899, overlap 30899 AATATAGAACAATAA TAAGAATC ACTG GATTCTTA ATGGGACTCTTCTCC TERM 32 30977 - 30989 + G 70 -5.5 -4.39002 | overlap 30976 TGATCTACAAAGATG GTGGT GGT ACCGC TTTTATCCAGGCTTT TERM 33 31581 - 31608 + G 73 -2.8 -5.1356 | gap 1 GGGTTACTTTGATAG CACTGCGATAAAC ATG GTTTGT-GTGGTG TTTTTATTGATCGCA TERM 34 31615 - 31631 + G 71 -5.1 -4.564 | TGTGTGGTGTTTTTA TTGATCG CAG CGCTCAA TTTTAGTTTGCACTT Swoo_0024 30877 - 32334 + | TrkH family potassium uptake protein Swoo_0025 32358 - 32885 + | protoporphyrinogen oxidase TERM 35 32901 - 32935 + T 100 -15.2 -2.93382 | opp_overlap 32910, overlap 32910 ATTTTGGTTTTCGCC GATAAAAAAGCCTGCT TTA AGCAGGCTTTGTTGTC TCTGTAACTCTCAAG TERM 36 32910 - 32926 + T 100 -12.3 -4.4458 | opp_overlap 32910, overlap 32901 TTCGCCGATAAAAAA GCCTGCT TTA AGCAGGC TTTGTTGTCTCTGTA TERM 37 32926 - 32910 - T 100 -12.3 -5.24129 | opp_overlap 32901 32910 TTCGCCGATAAAAAA GCCTGCT TTA AGCAGGC TTTGTTGTCTCTGTA Swoo_0026 33266 - 32961 - | ArsR family transcriptional regulator Swoo_0027 33463 - 34002 + | protoporphyrinogen oxidase TERM 38 34053 - 34072 + F 72 -8.6 -3.3095 | opp_overlap 34047 TGCAATGAAGTTTAG CGGCTTAA CCTG TTGAGCCG TTATCAGGAGTCTGT Swoo_0028 34092 - 34802 + | hypothetical protein Swoo_0029 35238 - 34792 - | hypothetical protein TERM 39 35002 - 35023 + g 71 -2.4 -5.15969 | gap 1 GAAATTTGGCTCGCT TAGGTT-GA TGTTC TCTAACCTA TTTTTTGCATTAACA TERM 40 35558 - 35542 - H 73 -4.5 -4.86001 | ATCAGCTGAGAAAAA TCTATAA CAG TCATAGA AACTTCGATACTGTC Swoo_0030 35575 - 35769 + | hypothetical protein Swoo_0031 35833 - 36261 + | hypothetical protein Swoo_0032 36366 - 36644 + | hypothetical protein Swoo_0033 36811 - 37287 + | hypothetical protein Swoo_0034 38887 - 37445 - | TrkH family potassium uptake protein TERM 41 38654 - 38642 - G 72 -7.7 -3.9122 | CATGGCGGCAAAGAA GCTGA CGA TCAGC CAAGTTAAGCTGGTT Swoo_0035 40350 - 38941 - | TrkA domain-containing protein TERM 42 39097 - 39109 + g 71 -4.8 -4.45117 | overlap 39096 GGCACCGATAGTCGT GCTG GGCGG CAGC TTTATTTCGCCTATC Swoo_0036 41637 - 40360 - | sun protein TERM 43 41186 - 41198 + g 82 -4.8 -5.18726 | overlap 41169 CAACTGTCTGGGTAG GCCT GTTTG AGGC TTTTTATTATCCAAG Swoo_0037 42601 - 41639 - | methionyl-tRNA formyltransferase TERM 44 42073 - 42091 + g 71 -3.8 -4.80882 | CTTCGACCAGTGCTT CTGGTC CCTGTTC GGCCAG TTTTTCATATAAGCT Swoo_0038 43118 - 42609 - | peptide deformylase Swoo_0039 43301 - 44410 + | peptidoglycan-binding LysM Swoo_0040 44539 - 45534 + | DNA protecting protein DprA Swoo_0041 45537 - 46010 + | hypothetical protein TERM 45 46038 - 46053 + T 93 -10.4 -5.03314 | opp_overlap 46038 ATAGTGATAAAGAAA GGAGGC TTAA GCCTCC TTTTTTGCACATGGA TERM 46 46053 - 46038 - T 89 -10.4 -4.58085 | opp_overlap 46038 ATAGTGATAAAGAAA GGAGGC TTAA GCCTCC TTTTTTGCACATGGA Swoo_0042 47974 - 46211 - | collagenase Swoo_0043 48086 - 48649 + | DNA topoisomerase type IA Zn finger domain-containing protein Swoo_0044 48724 - 49281 + | Sua5/YciO/YrdC/YwlC family protein Swoo_0045 49310 - 50230 + | coproporphyrinogen oxidase Swoo_0046 50781 - 50332 - | globin TERM 47 50984 - 50996 + G 71 -7.7 -3.78953 | TAGTAAATCGCCTCT GATCC ACG GGATC TTTGCTAATGAAACT Swoo_0047 50928 - 51749 + | shikimate 5-dehydrogenase Swoo_0048 51746 - 52009 + | hypothetical protein Swoo_0049 52571 - 52029 - | carbonic anhydrase TERM 48 53829 - 53807 - H 72 -9.2 -2.87527 | opp_overlap 53812 53823, overlap 53806 CAGCGAGGAGGAAAG GTTAACGGTT AAT AACCGTTAGC TGTGACGTTACTCGC TERM 49 54880 - 54861 - H 71 -9.2 -2.65808 | opp_overlap 54867 54876, overlap 54858 AGTCGTAACAAGGTA GCCCTAGG GGAA CCTGGGGC TGGATCACCTCCTTA TERM 50 55691 - 55679 - H 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 51 56489 - 56473 - H 75 -8 -4.08546 | overlap 56486 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 52 56995 - 56984 - H 71 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 53 58411 - 58394 - H 73 -7.1 -4.19746 | GCGACGGTAAAAGAA TTTAGAC TTCG GTCTAAA GGAGCGGTAGTTCAG TERM 54 58531 - 58496 - H 100 -13.4 -4.1891 | opp_overlap 58496 58503, overlap 58503 CTCCGCCAACACAAA GACGAAAGCCTCTGCA GAAA TGCAGAGGCTTTTTTC GTTTTGAGGAAAAAG TERM 55 58496 - 58531 + H 100 -15.6 -3.04398 | opp_overlap 58496 58503, overlap 58503 CTCCGCCAACACAAA GACGAAAGCCTCTGCA GAAA TGCAGAGGCTTTTTTC GTTTTGAGGAAAAAG TERM 56 58524 - 58503 - H 100 -14.5 -4.07089 | opp_overlap 58496 58503, overlap 58496 AACACAAAGACGAAA GCCTCTGCA GAAA TGCAGAGGC TTTTTTCGTTTTGAG TERM 57 58503 - 58524 + H 100 -14.5 -5.46698 | opp_overlap 58503 58496, overlap 58496 AACACAAAGACGAAA GCCTCTGCA GAAA TGCAGAGGC TTTTTTCGTTTTGAG TERM 58 61405 - 61425 + G 72 -6.8 -4.24285 | GGCTATCTGTTCAGT CGCCCCTT AGATG AAGAGGCG TTTATTCAATCTCTA Swoo_0050 59053 - 61485 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Swoo_0051 62552 - 61551 - | lysophospholipase TERM 59 62030 - 62065 + g 70 -7.5 -4.0056 | opp_overlap 62036 TAGGCAGTTTAATGC CATACATGGGGGCTG AAAAAA CAGCCGCCTTGAATG TTTGTGGGTGTTTAT Swoo_0052 64419 - 62644 - | hypothetical protein TERM 60 64562 - 64591 + r 73 -9.4 -3.02204 | opp_overlap 64568, overlap 64568 GGGCGTTTATGGATA AAAAAAGCCGAC ACTCAG GTCGGCTTTTTA TGGTTTAACTTTTAC TERM 61 64568 - 64585 + r 91 -8.4 -5.04325 | opp_overlap 64568, overlap 64562 TTATGGATAAAAAAA GCCGAC ACTCAG GTCGGC TTTTTATGGTTTAAC TERM 62 64585 - 64568 - R 100 -8.4 -5.64274 | opp_overlap 64568 64562 TTATGGATAAAAAAA GCCGAC ACTCAG GTCGGC TTTTTATGGTTTAAC Swoo_0053 65953 - 64613 - | oxygen-independent coproporphyrinogen III oxidase Swoo_0054 66678 - 66211 - | hypothetical protein TERM 63 66701 - 66720 + r 75 -7.9 -4.09685 | opp_overlap 66701 CCATATATAGAGAAA TGGCATC AATATC GATGCCA TTTTAGAAGGTAGAA TERM 64 66720 - 66701 - R 79 -8.6 -4.19483 | opp_overlap 66701 CCATATATAGAGAAA TGGCATCA ATAT CGATGCCA TTTTAGAAGGTAGAA Swoo_0055 67277 - 66741 - | hypothetical protein Swoo_0056 68003 - 67341 - | hypothetical protein TERM 65 68076 - 68056 - R 100 -15.5 -5.67967 | AGTAGCATAAAAAAA GGCGACAGT ATG ACTGTCGCC TTCAAAAAGTGTCAA TERM 66 68097 - 68085 - R 83 -7.7 -4.56597 | TGTCGCCTTCAAAAA GTGTC AAA GACAC CAATTCTTGTTCCAA TERM 67 68724 - 68689 - R 100 -13.6 -3.68265 | gap 1, opp_overlap 68700, overlap 68700 AAAGGTAATGCTAAA GTACAAAAAAAGGTGGC CTC GCCACCTTTTTTTA-AC ATGCCTAAATACTAC TERM 68 68714 - 68700 - R 100 -11.4 -5.75599 | opp_overlap 68700, overlap 68689 TAAAGTACAAAAAAA GGTGGC CTC GCCACC TTTTTTTAACATGCC TERM 69 68700 - 68714 + r 100 -11.4 -5.44119 | opp_overlap 68700 68689 TAAAGTACAAAAAAA GGTGGC CTC GCCACC TTTTTTTAACATGCC Swoo_0057 69356 - 68736 - | cytochrome c class I TERM 70 70103 - 70090 - g 70 -6.7 -4.11216 | TTTTCATCGCTAAAA GGCTT AGGT AAGCC TAAAGTGCTGAGTAT Swoo_0058 69541 - 70200 + | GTP-binding protein HSR1-related TERM 71 70264 - 70236 - T 90 -11.7 -4.08689 | opp_overlap 70236 TATCGAATAACCAAA GCCCCGATTTCAT TTT ATGAGGTCGGGGC TTTTTGTTGCCATAA TERM 72 70236 - 70264 + T 100 -16.1 -5.08601 | opp_overlap 70236 TATCGAATAACCAAA GCCCCGATTTCAT TTT ATGAGGTCGGGGC TTTTTGTTGCCATAA TERM 73 70395 - 70371 - T 95 -5.6 -5.71712 | overlap 70373 TTTTAGATAAAAAAA TAGCCGACGG AAAAA CCATCGGCCC AATTAGCTCTTTTGG TERM 74 70393 - 70373 - T 89 -10.4 -4.50122 | overlap 70371 TTAGATAAAAAAATA GCCGACGG AAAAA CCATCGGC CCAATTAGCTCTTTT TERM 75 70565 - 70540 - T 100 -11.2 -5.44119 | TTTAGGCGAAAAAAA GCCCCAGCAA ACTAAG TTGCTGAGGC GCCATAATTTGGCTA TERM 76 71562 - 71585 + T 100 -8.8 -5.27923 | opp_overlap 71562 71564 TGACGGTTTTAATTA GACCAGTTGC TCTT GCTGCTGGTC TTTTTTATGCACTTG Swoo_0059 72793 - 71559 - | transposase TERM 77 72519 - 72543 + g 71 -2.1 -5.0538 | overlap 72523 CGTAAATGTTCATCC TCAAGCTCTTT TTC AAGGCGCTTTA TTTTTTGAGCTGGCG TERM 78 72523 - 72539 + g 73 -2.9 -5.05153 | overlap 72519 AATGTTCATCCTCAA GCTCTTT TTC AAGGCGC TTTATTTTTTGAGCT TERM 79 72828 - 72800 - R 86 -9.8 -4.30987 | gap 1, opp_overlap 72808 AGTTGTCATAATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACAAAAACAA TERM 80 72876 - 72841 - R 100 -11.5 -5.12474 | gap 1, opp_overlap 72841 72843 72849, overlap 72849 GACAAGACACAAAAA CAA-AAAAAGCCTCTA AGAAG TAGAGGCTTTTTATTG ATTACTTTTACTTAC TERM 81 72841 - 72876 + r 81 -11.5 -2.84708 | gap 1, opp_overlap 72841 72849, overlap 72843 72849 GACAAGACACAAAAA CAA-AAAAAGCCTCTA AGAAG TAGAGGCTTTTTATTG ATTACTTTTACTTAC TERM 82 72843 - 72873 + r 80 -9.9 -3.54779 | opp_overlap 72841 72849, overlap 72841 72849 CAAGACACAAAAACA AAAAAAGCCTCTA AGAAG TAGAGGCTTTTTA TTGATTACTTTTACT TERM 83 72849 - 72867 + r 100 -8.9 -5.20534 | opp_overlap 72841 72849, overlap 72843 72841 ACAAAAACAAAAAAA GCCTCTA AGAAG TAGAGGC TTTTTATTGATTACT TERM 84 72867 - 72849 - R 100 -8.9 -6.23317 | opp_overlap 72849 72843 72841, overlap 72841 ACAAAAACAAAAAAA GCCTCTA AGAAG TAGAGGC TTTTTATTGATTACT Swoo_0060 75739 - 72902 - | DNA polymerase I Swoo_0061 76061 - 76714 + | ThiJ/PfpI domain-containing protein Swoo_0062 77587 - 76751 - | rhomboid family protein Swoo_0063 78024 - 77716 - | rhodanese domain-containing protein TERM 85 78058 - 78075 + r 78 -5.5 -5.03314 | opp_overlap 78058 GAAAAATATAAAAAA GGACTGA TTCT TCAGCCC TTTTTTGGCAGTCAA TERM 86 78075 - 78058 - R 100 -7.7 -5.69068 | opp_overlap 78058 GAAAAATATAAAAAA GGACTGA TTCT TCAGCCC TTTTTTGGCAGTCAA Swoo_0064 79122 - 78097 - | L-threonine 3-dehydrogenase TERM 87 79007 - 79019 + g 81 -6.2 -4.98436 | ATATGGACATCAGTG CCGC AAATA GCGG TTTTTCTAATCTTAA Swoo_0065 80327 - 79134 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 88 80396 - 80406 + r 90 -6.8 -5.55664 | CCTTAAACTTGCTCA GGCT CAC AGCC TTTTTTTACTGGTAG Swoo_0066 81237 - 80590 - | TetR family transcriptional regulator TERM 89 81613 - 81597 - g 75 -4.3 -4.89852 | TTAGAGCCATAAAAA GCCCAGA TTA TCGAGGC CGTTGGGGAGAGAGG TERM 90 82439 - 82453 + G 72 -5.7 -4.4891 | CTAGGTGACACCATG GGTGA ACTTC TCACC TTTTATGGTGCTGCG Swoo_0067 81515 - 82780 + | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 91 82820 - 82806 - T 70 -8.5 -3.35679 | opp_overlap 82806 GTCTTTTAGTTAGAA GGGCG GGCTT CGCCC TTCGAGGACGGCACT TERM 92 83048 - 83021 - T 78 -11.3 -2.67515 | overlap 83018 GCTAGGACGACACTA TGTGCCTGCGA GGACGT TCGCAGGCTCA CTGCTAGAACGCTGC Swoo_0068 84135 - 83377 - | lipopolysaccharide kinase TERM 93 84243 - 84264 + r 95 -13.1 -3.11218 | overlap 84234 84232 TTTATGGCTGAGAGC TAGAGCCCT TATC AGGGCTCTA TATTGAGCTATTTAC Swoo_0069 86230 - 84272 - | acyltransferase 3 TERM 94 85934 - 85907 - G 70 -6.3 -4.19024 | gap 1 GAAATTAGAGACAAA GGCGATAC-TGC TTGCT GCATGTTTCGCC AAATCTCGATAATCT Swoo_0070 86534 - 87577 + | glycosyl transferase family protein Swoo_0071 87624 - 88520 + | exopolysaccharide biosynthesis protein-like protein Swoo_0072 89340 - 88492 - | glycosyl transferase family protein TERM 95 89392 - 89372 - H 70 -2.5 -5.07971 | opp_overlap 89372, overlap 89375 GAAAATAACGAAAAA GAGTGAGTA TTT TATACACTC ATTTTTCTCTGGTTA Swoo_0073 89663 - 90418 + | glycosyl transferase family protein Swoo_0074 91508 - 90750 - | glycosyl transferase family protein Swoo_0075 91689 - 92378 + | glycosyl transferase family protein Swoo_0076 92528 - 93004 + | pantetheine-phosphate adenylyltransferase TERM 96 93413 - 93395 - g 71 -4.5 -4.60487 | GATTATCGTGAAAAA GGGGAAC TGCAG GTTTCCC ATGAATACCTTGGTG TERM 97 94094 - 94105 + G 71 -4.4 -4.62069 | AGCTCAGACAGCGCT CAGT ACAG ACTG TTTTTCGAATACACA Swoo_0077 93017 - 94522 + | hypothetical protein TERM 98 94579 - 94555 - T 81 -11.4 -2.85216 | opp_overlap 94555, overlap 94552 TAGGATCTAGAAGCA GCTCGCTGCG TAACT CGCAGTGAGC TTGTGAACCTCCTAG TERM 99 94555 - 94579 + T 100 -13.6 -3.31792 | opp_overlap 94552 94555 TAGGATCTAGAAGCA GCTCGCTGCG TAACT CGCAGTGAGC TTGTGAACCTCCTAG Swoo_0078 95419 - 94604 - | formamidopyrimidine-DNA glycosylase Swoo_0079 95976 - 95488 - | hypothetical protein TERM 100 96041 - 96056 + H 72 -7.6 -3.81626 | TCCACAAGTTAGGCT GTCTTC AAAT GAAGAC TTATTACATTTATTC TERM 101 96331 - 96341 + H 70 -8.2 -3.28791 | opp_overlap 96330 96331, overlap 96330 TCATCGTTTAGAAAG GGGC TTC GCCC TTCTAGGACGGCACT Swoo_0080 96780 - 98267 + | hypothetical protein TERM 102 100491 - 100481 - g 74 -5.4 -4.61527 | AAAATGGCTGAAAAA TCTG ATG CAGA AAAAGCAATTTATCA Swoo_0081 99563 - 100954 + | hypothetical protein Swoo_0082 102559 - 101573 - | molybdenum cofactor biosynthesis protein A TERM 103 102046 - 102032 - G 87 -8.6 -4.4891 | opp_overlap 102029 102032 TCGACCACGACAAAA CTCGAT AAG ATCGAG TACTTCATCATCATT Swoo_0083 104386 - 102581 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 104 103042 - 103028 - G 72 -7.8 -3.87994 | AGCCAGCTTGATAAA GTCGGC ATC GCCAAC GGAAACTCCACCTGA TERM 105 104418 - 104430 + r 76 -4.1 -5.19328 | overlap 104412 104409 ATTTGGCAATTGCCT CAGCA AGT TGTTG TTTTTGTTCTGGCGT Swoo_0084 104991 - 104401 - | molybdopterin-guanine dinucleotide biosynthesis protein A Swoo_0085 105694 - 104975 - | ABC transporter related Swoo_0086 106405 - 105698 - | binding-protein-dependent transport systems inner membrane component TERM 106 106274 - 106260 - G 75 -5 -4.81863 | AAAGCCAGAATAAAA CCCAAT ATC ATTGAG GGAAGTAGAGTGATC TERM 107 106378 - 106358 - G 100 -16.9 -4.43477 | opp_overlap 106360 TGGATCCAATGAAAA CAGCAGGCC TAA GGCCTGCTG TATAAGGGCTAACCA TERM 108 106360 - 106376 + g 87 -13.7 -2.87931 | opp_overlap 106358 GATCCAATGAAAACA GCAGGCC TAA GGCCTGC TGTATAAGGGCTAAC TERM 109 106456 - 106429 - R 72 -5.5 -4.67904 | opp_overlap 106430, overlap 106430 CACCAATTTGAAAAA TGGCGCACCTA GAACAT TAGGTGTGCCT GTTACACAAGATTGT TERM 110 106455 - 106430 - R 74 -9 -3.40019 | opp_overlap 106430, overlap 106429 ACCAATTTGAAAAAT GGCGCACCTA GAACAT TAGGTGTGCC TGTTACACAAGATTG TERM 111 106430 - 106455 + r 87 -11.9 -3.02461 | opp_overlap 106430 106429 ACCAATTTGAAAAAT GGCGCACCTAG AACA TTAGGTGTGCC TGTTACACAAGATTG Swoo_0087 107312 - 106500 - | extracellular solute-binding protein TERM 112 107561 - 107545 - H 71 -9.5 -2.71364 | opp_overlap 107544 CTATTTGCTCAACTA TGGTGAT AGA ATCACCA GTATATGAGTCAAAA TERM 113 107744 - 107767 + G 73 -6 -4.39889 | gap 1, overlap 107747 CAGCGTTGAAGATGC TGAGCAGCTAC GAA GTCGCTGC-CA TTTTGATCTACTTAT TERM 114 108317 - 108339 + G 79 -4.8 -5.06414 | TCGTGAAGGTCTATT TAGTTTTGCC TCT GGCGGCACTA TTTTTCTTGACGAGA Swoo_0088 107595 - 108974 + | two component, sigma54 specific, Fis family transcriptional regulator Swoo_0089 108979 - 111096 + | integral membrane sensor signal transduction histidine kinase TERM 115 111147 - 111124 - T 82 -5.2 -5.47218 | overlap 111125 TGCTAGGCAAAAAAA TGCCGGGA AAATTAAA TCCCGGCT ATAAGAGTGTGTGAG TERM 116 111146 - 111125 - T 79 -8.7 -3.87608 | overlap 111124 GCTAGGCAAAAAAAT GCCGGGA AAATTAAA TCCCGGC TATAAGAGTGTGTGA TERM 117 111463 - 111440 - T 100 -6.6 -5.72616 | overlap 111441 ATTTAGACAAAAAAA TGCCGGGAAA ATAA TATCCCGGCT ATAAGAGTGTGTGAG TERM 118 111462 - 111441 - T 83 -10.1 -4.01943 | overlap 111440 TTTAGACAAAAAAAT GCCGGGAAA ATAA TATCCCGGC TATAAGAGTGTGTGA Swoo_0090 112127 - 111663 - | GCN5-related N-acetyltransferase TERM 119 112236 - 112224 - R 70 -4.8 -4.52873 | opp_overlap 112222 112224 TGGGTATAAAAACAA CTGG TCTGT CCAG TATTTTTGAGGAAAT TERM 120 112293 - 112318 + r 79 -10.6 -3.27923 | opp_overlap 112290 112293, overlap 112297 CTAAGCAATTAATTA GCAAGCATTA ACGGTG TAATGCTTGC TTGGTCGTGTTGGCG TERM 121 112318 - 112293 - R 76 -10.6 -2.87354 | opp_overlap 112293 112297, overlap 112290 CTAAGCAATTAATTA GCAAGCATTA ACGGTG TAATGCTTGC TTGGTCGTGTTGGCG Swoo_0091 113006 - 112335 - | hypothetical protein Swoo_0092 113367 - 114047 + | hypothetical protein Swoo_0093 115450 - 114092 - | isochorismate synthase TERM 122 115886 - 115872 - g 74 -2.1 -5.2422 | overlap 115883 AACTAGATGAAAAAA CAACA AAAAG TGCTG AGAGTATCTAGCTTG TERM 123 116130 - 116146 + G 71 -9.5 -3.0806 | overlap 116115 116136 CGCGTGGGTGGTGAT TCAACTC CAC GAGTTGA TATTCGAGGTTTAAA Swoo_0094 115863 - 117812 + | TonB-dependent receptor Swoo_0095 117816 - 119171 + | ABC transporter related Swoo_0096 119185 - 119850 + | cobalt transport protein TERM 124 119857 - 119830 - f 82 -8.4 -4.32857 | overlap 119831 TTTGGCAAACATAAA CGCACGACTCAC TGGC GTTAGTCGTGCT CATCATTAAAGAAGG TERM 125 119856 - 119831 - f 87 -11.9 -3.19232 | overlap 119830 TTGGCAAACATAAAC GCACGACTCAC TGGC GTTAGTCGTGC TCATCATTAAAGAAG Swoo_0097 119878 - 120423 + | hypothetical protein Swoo_0098 120489 - 121241 + | hypothetical protein Swoo_0099 121244 - 121468 + | hypothetical protein Swoo_0100 121694 - 122872 + | metal dependent phosphohydrolase TERM 126 122890 - 122922 + F 93 -9.9 -5.1417 | opp_overlap 122900, overlap 122900 TATTTTATAAGTATA TGCTTTTAAAGGGGC TAA GCCCCTTTAGGGCCA TTTTTCGTTTTATGG TERM 127 122900 - 122912 + F 81 -10.5 -3.5771 | opp_overlap 122900, overlap 122890 GTATATGCTTTTAAA GGGGC TAA GCCCC TTTAGGGCCATTTTT TERM 128 122912 - 122900 - f 81 -10.5 -3.55071 | opp_overlap 122900 122890 GTATATGCTTTTAAA GGGGC TAA GCCCC TTTAGGGCCATTTTT TERM 129 123293 - 123306 + G 74 -8.1 -4.03782 | opp_overlap 123292 123293 TTTAGATCAGGAAAT GCTGC CGTT GCAGC TTTAGTTATGCTGTT Swoo_0101 122990 - 123649 + | paraquat-inducible protein A Swoo_0102 123798 - 124481 + | ThiJ/PfpI domain-containing protein TERM 130 124575 - 124595 + F 77 -8.3 -3.87994 | opp_overlap 124577 124579 AATAACCACTTCTAA TAGAGCTGC TTT GCATCTCTA TTTATGCCACTACGT TERM 131 124600 - 124614 + F 70 -7.8 -3.55368 | overlap 124601 TTGCATCTCTATTTA TGCCAC TAC GTGGCG TTATATGGATTGAGT Swoo_0103 124667 - 124828 + | hypothetical protein Swoo_0104 125743 - 124811 - | hypothetical protein TERM 132 126094 - 126106 + r 72 -9.1 -3.28924 | opp_overlap 126078, overlap 126078 126077 TCGCCCTGCGAGAGC GCGAC CTT GTCGC TTCTAGAAAAAGATA Swoo_0105 127479 - 126298 - | diaminopropionate ammonia-lyase TERM 133 127550 - 127508 - R 76 -9.1 -3.73445 | opp_overlap 127510, overlap 127502 127506 127510 TATTATGAACAAAGA GACCTCTGCCACCCTATCT GGAGG AGACAGAGAGGCAGGGGTT GGTAAAACAGGCTTA TERM 134 127548 - 127510 - R 85 -11.7 -3.43925 | opp_overlap 127510, overlap 127502 127508 127506 TTATGAACAAAGAGA CCTCTGCCACCCTATCT GGAGG AGACAGAGAGGCAGGGG TTGGTAAAACAGGCT TERM 135 127510 - 127548 + r 74 -9.5 -3.14211 | opp_overlap 127502 127510 127508 127506 TTATGAACAAAGAGA CCTCTGCCACCCTATCT GGAGG AGACAGAGAGGCAGGGG TTGGTAAAACAGGCT Swoo_0106 127949 - 127566 - | endoribonuclease L-PSP Swoo_0107 128650 - 127970 - | YheO domain-containing protein TERM 136 128934 - 128949 + H 79 -9 -4.09685 | opp_overlap 128925, overlap 128925 CTAAAACAGGTTTCC GGTCAC TTTA GTGACC TTTTGGCAAATAGGC Swoo_0108 128991 - 130157 + | peptidase M24 TERM 137 130171 - 130200 + F 80 -11.6 -2.52676 | AATTTTAACAGCCAT TGATCTCTCAGG AGGGGA CTTGAGAGATCA TCACTTAAGAGCATC Swoo_0109 130221 - 131000 + | Asp/Glu/hydantoin racemase Swoo_0110 131040 - 132020 + | hypothetical protein TERM 138 132903 - 132891 - g 80 -9.1 -4.09243 | GATAGGTGTTGAAAA GGCCA CCA TGGCC CTGAACCTGATGCCA Swoo_0111 132103 - 133074 + | hypothetical protein Swoo_0112 133105 - 134259 + | amidohydrolase TERM 139 134303 - 134326 + F 100 -8.2 -5.43414 | opp_overlap 134303 CAGTGTATAGATTAA GGCTATGAGT TTAG GTTCATAGCC TTTTTTGTGTCTAAT Swoo_0113 134614 - 135708 + | NADH:flavin oxidoreductase/NADH oxidase Swoo_0114 135856 - 136716 + | hypothetical protein TERM 140 136790 - 136821 + F 72 -9.5 -2.83233 | TCGAGTTGGCCGTGT GTATTTAGCCTCC ATTATG GGAGGCTAAAAGC TGGTTGATCTCATTA TERM 141 137610 - 137626 + G 91 -8.7 -4.94992 | opp_overlap 137610 137612 AAATATCAAATATTA TATCGGC GCC GCCGGTA TTTTTCTAAGTTTAG Swoo_0115 137584 - 140055 + | lysyl endopeptidase TERM 142 140076 - 140100 + T 100 -14.4 -4.72272 | opp_overlap 140080, overlap 140080 ATAGGTGATTGACGA TAAACCCGGC TATAT GCCGGGTTTA TTTTTAATAGGAGAG TERM 143 140096 - 140080 - T 86 -10.8 -3.97947 | opp_overlap 140076 140080 GTGATTGACGATAAA CCCGGC TATAT GCCGGG TTTATTTTTAATAGG TERM 144 140080 - 140096 + T 93 -10.8 -4.91852 | opp_overlap 140080, overlap 140076 GTGATTGACGATAAA CCCGGC TATAT GCCGGG TTTATTTTTAATAGG Swoo_0116 141183 - 140128 - | hypothetical protein Swoo_0117 143493 - 141184 - | MORN repeat-containing protein TERM 145 141705 - 141716 + g 77 -2.2 -5.42259 | TTTTATAGGTTTCAC TGCG ATAG CGTA TTTTTTTAAAGCTGA TERM 146 142130 - 142116 - G 78 -10 -3.67597 | opp_overlap 142115 TGGCGTAGTGAATAA GCTCTC GTG GAGAGC CTGTATCGTAAAATG TERM 147 142860 - 142882 + g 75 -4.9 -4.79352 | overlap 142856 CATTGTATTGACCTT TGACTAAGG TTTGC CCTTGGTTA TTTTGTTCTAGATAG Swoo_0118 144570 - 143764 - | short-chain dehydrogenase/reductase SDR TERM 148 144595 - 144643 + r 100 -15 -2.91264 | gap 1, opp_overlap 144598 144600 144601, overlap 144601 CCGTTAATAGCGATA TAAGAGTCACCTCCTAGT-AAGT ACAG GCTTCACTAGGAGGTGATTTTTA TATATAGCTAAGGCA TERM 149 144638 - 144600 - R 78 -9.8 -3.3464 | gap 1, opp_overlap 144595 144601, overlap 144598 144601 AATAGCGATATAAGA GTCACCTCCTAGT-AAG TACAGG CTTCACTAGGAGGTGAT TTTTATATATAGCTA TERM 150 144601 - 144637 + r 100 -14 -5.04597 | gap 1, opp_overlap 144600 144598 144601, overlap 144595 ATAGCGATATAAGAG TCACCTCCTAGT-AAGT ACAG GCTTCACTAGGAGGTGA TTTTTATATATAGCT TERM 151 144637 - 144601 - R 91 -13.3 -2.60061 | gap 1, opp_overlap 144601 144595, overlap 144600 144598 ATAGCGATATAAGAG TCACCTCCTAGT-AAG TACAGG CTTCACTAGGAGGTGA TTTTTATATATAGCT Swoo_0119 145577 - 144732 - | enoyl-CoA hydratase/isomerase TERM 152 145385 - 145398 + g 71 -8.1 -3.76402 | opp_overlap 145385 TATCGTAGTGGCAAA CCCAG ATCT CTGGG TTTGCTGACTGGAAT Swoo_0120 145803 - 146696 + | LysR family transcriptional regulator Swoo_0121 148161 - 146806 - | glutathione-disulfide reductase Swoo_0122 148812 - 148303 - | hypothetical protein Swoo_0123 149707 - 148931 - | hypothetical protein Swoo_0124 150011 - 152050 + | oligopeptidase A TERM 153 152070 - 152095 + T 100 -12.7 -5.49569 | opp_overlap 152070 GTTTAATCTCAAAAA TGCCAATCGGT TTAA ATCGATTGGCA TTTTTTATATTCATA TERM 154 152095 - 152070 - T 89 -10.5 -4.66833 | opp_overlap 152070 GTTTAATCTCAAAAA TGCCAATCGGT TTAA ATCGATTGGCA TTTTTTATATTCATA Swoo_0125 153251 - 152127 - | monooxygenase FAD-binding Swoo_0126 153464 - 153994 + | hypothetical protein Swoo_0127 154837 - 154184 - | glutathione S-transferase domain-containing protein TERM 155 154430 - 154440 + g 77 -3.2 -5.30686 | GAGGTATTGCAGAAA GCGT TTG ATGC TTTTTTCTAACTGTT Swoo_0128 155867 - 154959 - | LysR family transcriptional regulator TERM 156 156072 - 156045 - H 100 -11.4 -5.39721 | GGATGAGAGAAAAAA GCCGCTAATG GATGGGGT CATTAGCGGC GGTAAATAGGTTGGC Swoo_0129 156336 - 157049 + | 3-methyladenine DNA glycosylase TERM 157 157084 - 157067 - T 100 -12.7 -5.63103 | opp_overlap 157063 TTTTAAGCAAAAAAA CCAGCCC GGTA GGGCTGG TGGATGTTCGCCAAG Swoo_0130 157912 - 157157 - | hypothetical protein Swoo_0131 158355 - 159506 + | RND family efflux transporter MFP subunit TERM 158 160879 - 160889 + G 70 -6.8 -4.14392 | TGTCAGCCGTATTCG TGCC TAT GGCA TTTATGTCTGGCTCT Swoo_0132 159519 - 162656 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 159 162673 - 162702 + F 100 -13.7 -3.39895 | opp_overlap 162665 162679, overlap 162679 CTAATTACTCTTTGA TAAAAAGCCCGGC ACCT GCTGGGCTTTTTG TTGCTTCATACACAA TERM 160 162696 - 162679 - f 87 -8.3 -4.83169 | opp_overlap 162673 162679 ACTCTTTGATAAAAA GCCCGGC ACCT GCTGGGC TTTTTGTTGCTTCAT TERM 161 162679 - 162696 + F 100 -10.5 -5.20534 | opp_overlap 162679, overlap 162673 ACTCTTTGATAAAAA GCCCGGC ACCT GCTGGGC TTTTTGTTGCTTCAT TERM 162 163188 - 163178 - g 72 -5.4 -4.4727 | overlap 163169 TTAATATTGATAAAA CCAA AAC TTGG ATTGAGATCACCGAT Swoo_0133 163036 - 163566 + | hypothetical protein TERM 163 163610 - 163580 - T 80 -9.8 -3.58518 | opp_overlap 163579 163581, overlap 163578 163581 AACAGTAAGGAAAGA GTGGCTCGATAAAC AGA ATTTACCGAGCCAT GTTTCATGCTAGTTA TERM 164 163581 - 163609 + T 81 -10.4 -3.4914 | opp_overlap 163580 163578 163581, overlap 163579 ACAGTAAGGAAAGAG TGGCTCGATAAA CAGAA TTTACCGAGCCA TGTTTCATGCTAGTT TERM 165 163609 - 163581 - T 93 -13.3 -2.74026 | opp_overlap 163581 163579, overlap 163580 163578 ACAGTAAGGAAAGAG TGGCTCGATAAAC AGA ATTTACCGAGCCA TGTTTCATGCTAGTT Swoo_0134 165252 - 163636 - | AbgT putative transporter TERM 166 165211 - 165237 + g 76 -8 -4.20783 | opp_overlap 165211, overlap 165213 AGGAGACCCTGAAGA GTTGAGATCTTG CGG CAAGCTCTCATC TTTATTCAATCCCAT TERM 167 165213 - 165235 + g 75 -9.2 -3.70307 | opp_overlap 165211, overlap 165211 GAGACCCTGAAGAGT TGAGATCTTG CGG CAAGCTCTCA TCTTTATTCAATCCC Swoo_0135 166594 - 165419 - | AraC family transcriptional regulator Swoo_0136 166858 - 169239 + | peptidase S45 penicillin amidase TERM 168 169262 - 169285 + F 100 -14.6 -5.1286 | TTGTTGATGTTCATT GGGCGTACTC TTCT GAGTGCGCCC TTTTTCTAATTTTTA TERM 169 169340 - 169311 - f 100 -7.9 -5.47218 | TTTTAGGCAAAAAAA TGGACCCATGC AGGTAGAA GCATGAGCCCA AAAAGGGGATGATGG TERM 170 169556 - 169536 - f 100 -6.8 -5.74122 | overlap 169537 CAGTAGATAAAAAAA TGGCCTCT GGGAT AGAGGCCT AAGTAAGACACGATT TERM 171 169555 - 169537 - f 85 -10.3 -4.02846 | overlap 169536 AGTAGATAAAAAAAT GGCCTCT GGGAT AGAGGCC TAAGTAAGACACGAT TERM 172 169643 - 169596 - f 90 -12.8 -2.87132 | opp_overlap 169591, overlap 169602 CCTTGGTGGGATATA CCCAAACAACTTCAAGATGCAG GATT CAGCATGTCGAGGTTGCTTGGG TATACATATTAAACG Swoo_0137 170138 - 170707 + | LemA family protein TERM 173 170941 - 170915 - g 74 -8 -4.13767 | opp_overlap 170915 GTTGCTAGTTTAAAA GCTCTTAGACAG CGA CTGTATATGAGC TTGGCTATATTTGCC Swoo_0138 170750 - 171760 + | hypothetical protein Swoo_0139 171761 - 172660 + | lytic transglycosylase catalytic Swoo_0140 174099 - 172705 - | multi anti extrusion protein MatE TERM 174 174042 - 174030 - G 71 -9.1 -3.37344 | opp_overlap 174039 CCGCGACCGAAGGAA TGGCG TAG CGCCA AAATGTTCGGCTGAT TERM 175 174388 - 174398 + G 70 -6.8 -4.11484 | overlap 174381 GTTTGATCGAAGTGC CAGG CTT CCTG TTTTGACCCCTTGCG Swoo_0141 174227 - 175144 + | LysR family transcriptional regulator Swoo_0142 175197 - 175568 + | hypothetical protein TERM 176 175628 - 175596 - T 100 -16.5 -4.77036 | opp_overlap 175602 CCTCATGACTAAAAA TAGAAAGAGCCAGCT TAA AGCTGGCTCTTTTTA TGGCCTGATCTCATT TERM 177 175602 - 175622 + T 100 -15.5 -4.86001 | opp_overlap 175596 GACTAAAAATAGAAA GAGCCAGCT TAA AGCTGGCTC TTTTTATGGCCTGAT Swoo_0143 176531 - 175689 - | hypothetical protein TERM 178 176181 - 176195 + g 74 -5.6 -4.73388 | opp_overlap 176155, overlap 176153 ACCGTGAAGTTCATG GAGCAC CAT GCGCTC TTTTTCATGGCGGTT Swoo_0144 176728 - 177516 + | hypothetical protein Swoo_0145 177920 - 177513 - | hypothetical protein Swoo_0146 179176 - 178001 - | metal dependent phosphohydrolase TERM 179 178339 - 178351 + g 79 -9.1 -3.89524 | TAAAAGCTTTGACTT GAGGG TAG CCCTC TTTATAGCATCGGCT Swoo_0147 179362 - 179838 + | redoxin domain-containing protein TERM 180 179862 - 179877 + T 100 -9 -5.63517 | opp_overlap 179862 GCTTGTCTGTATATA GGAGCT TTAA AGCTCC TTTTTTGTTTAGGCC Swoo_0148 181841 - 179886 - | methyl-accepting chemotaxis sensory transducer TERM 181 180576 - 180590 + g 87 -8.6 -4.57755 | opp_overlap 180562 AGAGGTGTTGTTGAC CTCTTG AGC CAAGAG TTTTATCTCATCAGT TERM 182 180755 - 180773 + g 70 -9.6 -2.89055 | CAAAGCGTTGTAGTA GCTGGTTA AAG TGACCAGC TATCTGCCCGGTTTC Swoo_0149 183264 - 181954 - | integral membrane sensor signal transduction histidine kinase Swoo_0150 184040 - 183315 - | two component transcriptional regulator TERM 183 183557 - 183543 - G 78 -10 -3.62096 | overlap 183547 TTTGAGTACGGCAAA CTCACC ACT GGTGAG AGAGATAGCCTCTTC Swoo_0151 184505 - 184990 + | transcription elongation factor GreB Swoo_0152 184983 - 185873 + | methyltransferase type 11 Swoo_0153 185932 - 188340 + | RNA-binding S1 domain-containing protein TERM 184 188363 - 188384 + F 100 -14.5 -4.96848 | opp_overlap 188363 TTGGATGCATAAAAA TGCCGAAGC TAAC GCTTCGGCA TTTTTGTATCACGGG TERM 185 188384 - 188363 - f 100 -14.5 -4.87665 | opp_overlap 188363 TTGGATGCATAAAAA TGCCGAAGC TAAC GCTTCGGCA TTTTTGTATCACGGG Swoo_0154 188521 - 190491 + | sulfatase Swoo_0155 190993 - 190484 - | hypothetical protein Swoo_0156 191829 - 191059 - | bioH protein TERM 186 192672 - 192712 + G 84 -13.4 -2.55015 | gap 1, overlap 192669 ACGGCATATCCATGT GCAGGTCTGGTGCTT-AGC AAGA GCTGAAGCACCGGGGCTGC TGGATTGACTGAACT Swoo_0157 191896 - 192720 + | competence protein ComF Swoo_0158 195272 - 192726 - | peptidase M14 carboxypeptidase A TERM 187 195308 - 195323 + H 72 -6.2 -4.431 | opp_overlap 195307 195300 AATATAAGGTTAAAT TAGCAT TTAG ATGCTA TTTTATCCATAAATA Swoo_0159 195501 - 196079 + | IscR-regulated protein YhgI TERM 188 196104 - 196128 + T 100 -15.1 -5.5074 | opp_overlap 196104 TTGATAAATAAAAAA GCGAGTGGATA TTA TGTCCACTCGC TTTTTTGTTGCGTTA TERM 189 196128 - 196104 - T 100 -12.9 -5.72622 | opp_overlap 196104 TTGATAAATAAAAAA GCGAGTGGATA TTA TGTCCACTCGC TTTTTTGTTGCGTTA Swoo_0160 197479 - 196145 - | MATE efflux family protein TERM 190 198447 - 198428 - g 75 -10.8 -2.85061 | opp_overlap 198426 198425, overlap 198425 198430 ATAAGGGCAGAATTA GATCTTCC AGTT GGAAGATC CCGTTATAACTGCAC Swoo_0161 197504 - 198532 + | polysaccharide deacetylase Swoo_0162 199571 - 198549 - | response regulator receiver modulated CheB methylesterase TERM 191 199619 - 199631 + r 70 -6.3 -4.28656 | AAATGTCCAGTGTGA GGAAT ACC ATTCC TTTTGGATCTTAAGT Swoo_0163 200514 - 199672 - | MCP methyltransferase, CheR-type TERM 192 199910 - 199926 + g 72 -3.6 -4.92783 | opp_overlap 199910 199911, overlap 199911 AATATGGCATCGAAA GGGCCA TTCAT TGGCCA TTTTTCTAATAAATT TERM 193 200425 - 200437 + g 83 -4.1 -5.43414 | overlap 200399 ACGACTCAGTCGTGA GTACA CCA TGTGC TTTTTTCTCTCTGGT Swoo_0164 203925 - 200554 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 194 201736 - 201750 + g 74 -5.6 -4.72029 | overlap 201738 GACTGTCCCTATCTT GTCACC GTT GGTGTC TTTTATTGGATTAGC Swoo_0165 204500 - 203949 - | CheW protein Swoo_0166 206581 - 204548 - | CheA signal transduction histidine kinase Swoo_0167 206978 - 206616 - | response regulator receiver protein Swoo_0168 207274 - 206978 - | hypothetical protein Swoo_0169 208108 - 207464 - | electron transport protein SCO1/SenC Swoo_0170 209047 - 208139 - | protoheme IX farnesyltransferase TERM 195 209064 - 209076 + r 85 -6.9 -5.02357 | overlap 209065 GCTAATCCTCTGCAT TGGCG TTA CGCCG TTTTGTTTAGTTATA TERM 196 209065 - 209075 + r 73 -8.2 -3.59787 | overlap 209064 CTAATCCTCTGCATT GGCG TTA CGCC GTTTTGTTTAGTTAT Swoo_0171 210133 - 209150 - | cytochrome oxidase assembly Swoo_0172 210678 - 210133 - | hypothetical protein Swoo_0173 211584 - 210889 - | hypothetical protein Swoo_0174 211619 - 211837 + | hypothetical protein Swoo_0175 212833 - 211958 - | cytochrome c oxidase subunit III Swoo_0176 213393 - 212830 - | cytochrome c oxidase assembly protein CtaG/Cox11 Swoo_0177 215018 - 213396 - | cytochrome c oxidase, subunit I TERM 197 213569 - 213558 - G 74 -7.2 -4.18042 | TTGAGATAAACCAAA GGCG AAAC CGCC AATTGAAACTATCTG Swoo_0178 216569 - 215028 - | cytochrome c oxidase, subunit II TERM 198 217146 - 217131 - R 89 -7.5 -5.03314 | GCTATTCGCAAAAAA GCCCC ATAAAA GGGGC TTAAGAAGATAGGGG Swoo_0179 217680 - 217168 - | hypothetical protein Swoo_0180 218294 - 217677 - | LexA repressor Swoo_0181 218514 - 220937 + | glycerol-3-phosphate O-acyltransferase TERM 199 220954 - 220974 + F 76 -10.4 -2.73875 | overlap 220952 AATTAACAGTGAGTA TGGGGCCG TAAAT CGGCCTCA TCATCTTGAAAGCGG TERM 200 221261 - 221277 + G 84 -8.7 -4.30978 | overlap 221262 GAAACCAACCTTCAT TTCGAGC CTG GCTCGAG TTTTGATACCTTGAC TERM 201 221262 - 221276 + G 74 -10 -3.18105 | overlap 221261 AAACCAACCTTCATT TCGAGC CTG GCTCGA GTTTTGATACCTTGA TERM 202 221947 - 221964 + G 85 -7.7 -4.69048 | CGTTGCTTCTTCGTT CCTAGGG GTTA CCTTAGG TTTGTTTGATTTTCT Swoo_0182 221045 - 222301 + | aromatic amino acid transporter TERM 203 222337 - 222322 - T 81 -10.4 -3.57971 | opp_overlap 222322 AGATTCAGTCTGAAA GCCCTC TTCT GAGGGC TTTTTTGTTTCTATT TERM 204 222322 - 222337 + T 100 -10.4 -5.7827 | opp_overlap 222322 AGATTCAGTCTGAAA GCCCTC TTCT GAGGGC TTTTTTGTTTCTATT Swoo_0183 223358 - 222348 - | AraC family transcriptional regulator TERM 205 222665 - 222653 - G 73 -4.8 -4.63527 | opp_overlap 222663 TGATCATCTCAAAAA GCAC TTTAG GTGC ATCATGGGGCTGAGG TERM 206 222943 - 222954 + g 73 -4.4 -4.78572 | ATCGCAACTCTGAGG GAGT CTAG ACTC TTTTGTTGCTTAAAA TERM 207 223241 - 223229 - G 73 -9.1 -3.53184 | opp_overlap 223228 GAGTAAAAGGGATAA GAGCC ATA GGCTC CTGCATTAAGGTTTG Swoo_0184 223493 - 223852 + | major facilitator superfamily permease Swoo_0185 223845 - 225065 + | putative multidrug resistance efflux pump TERM 208 225072 - 225098 + T 80 -5.8 -5.15381 | opp_overlap 225072, overlap 225073 TCAATTTAAGATATA CCCCAACCTC AAGATCA GGGGTTGGGC TTTTTTGCGTGTGTT TERM 209 225073 - 225097 + T 78 -9.3 -3.67602 | opp_overlap 225072, overlap 225072 CAATTTAAGATATAC CCCAACCTC AAGATCA GGGGTTGGG CTTTTTTGCGTGTGT Swoo_0186 226342 - 225146 - | diguanylate cyclase Swoo_0187 226989 - 226576 - | globin Swoo_0188 227207 - 228001 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 210 228034 - 228065 + T 100 -16 -4.35116 | opp_overlap 228039, overlap 228039 TGCTAACGCATAAGT AAAAACGCCTGCTC ATGT GAGCAGGCGTTTTG TTTTGCTATAACCTA TERM 211 228039 - 228060 + T 100 -15.9 -5.16132 | opp_overlap 228039, overlap 228034 ACGCATAAGTAAAAA CGCCTGCTC ATGT GAGCAGGCG TTTTGTTTTGCTATA TERM 212 228060 - 228039 - T 100 -15.9 -4.93968 | opp_overlap 228039 228034 ACGCATAAGTAAAAA CGCCTGCTC ATGT GAGCAGGCG TTTTGTTTTGCTATA Swoo_0189 231219 - 228085 - | CzcA family heavy metal efflux protein TERM 213 228864 - 228874 + g 74 -6.8 -4.30441 | TAGTGATCACAGGTA GCTC TCT GAGC TTTTCGATATTATCC TERM 214 229158 - 229184 + g 75 -4.3 -4.89852 | GTTCATCAACATCCC CCCCTGTGATC TTAAT GCCTACAGGGG TTTTTATCCCTGTAG Swoo_0190 233033 - 231234 - | RND family efflux transporter MFP subunit TERM 215 231830 - 231841 + g 95 -3.6 -5.61824 | TGGCGTAAAAGGGGA CCCG GTAT TGGG TTTTTTTCGATTTTG Swoo_0191 233472 - 233056 - | hypothetical protein TERM 216 233226 - 233242 + g 71 -2.2 -5.1244 | GATGATTTTTATGCT TTGGGC AAGAG GCACAA TTTTTATGTTGCTCC Swoo_0192 234175 - 233744 - | hypothetical protein TERM 217 233967 - 233988 + g 76 -3 -5.25893 | ATAGTTTGCTCAAGT TCACAGCA ATGGGA TGGTGTGA TTTTTTGCTCTGTGT TERM 218 234350 - 234328 - R 78 -9.9 -3.3506 | overlap 234319 GTCAAACTTGCAGAA GCCAGTTGA AGGTA TCAACCGGC TTCAAAACAAGTTTA Swoo_0193 234785 - 234363 - | hypothetical protein Swoo_0194 235471 - 234986 - | hypothetical protein TERM 219 235216 - 235232 + g 78 -6.5 -4.5954 | opp_overlap 235213 235215 235218, overlap 235218 CGTTTACTAGAATAC CAGCGAT GGC ATCGCAG TTTTGTCTACTATCC TERM 220 235725 - 235739 + H 73 -2.8 -5.24799 | opp_overlap 235725 ATTGTGAATATAAAT TGAGCA GAG TGCTAA TTTTTATATTTATCA Swoo_0195 235890 - 236453 + | NapC/NirT cytochrome c domain-containing protein TERM 221 236470 - 236449 - T 70 -8.9 -3.1404 | opp_overlap 236454, overlap 236448 ACGTATATCCAAAAG GATAAGTAT CTTA ATACTTATC TAGACTAAGCCATTT TERM 222 236526 - 236507 - T 82 -9.2 -4.19953 | opp_overlap 236507 TAGTTAACTTTAAAA GCCTCGCT ATCT AGCGGGGC TTTTCTGTACATGGA TERM 223 236507 - 236526 + T 100 -11.4 -4.55287 | opp_overlap 236507 TAGTTAACTTTAAAA GCCTCGCT ATCT AGCGGGGC TTTTCTGTACATGGA TERM 224 236804 - 236788 - T 71 -9.5 -2.64933 | opp_overlap 236788 TAGGCAGCCATAGCA TCAAGCT AGG AGCTTGA TTGGTAAAACGTAAT TERM 225 236788 - 236804 + T 74 -9.5 -3.1505 | opp_overlap 236788 TAGGCAGCCATAGCA TCAAGCT AGG AGCTTGA TTGGTAAAACGTAAT Swoo_0196 237847 - 236867 - | hypothetical protein TERM 226 236901 - 236915 + g 76 -4.2 -5.13344 | overlap 236898 236897 CGATGACAATTTGCA GCGC CTTGCCT GCGC TTTTTCTCTTGATGT Swoo_0197 238793 - 238245 - | hypothetical protein Swoo_0198 248796 - 238795 - | YD repeat-containing protein TERM 227 241916 - 241927 + g 76 -5.8 -4.81551 | TAACCGTCATCGGCT TGGC TAGT GCCA TTTTTGGTATAGGTG Swoo_0199 249369 - 249097 - | hypothetical protein Swoo_0200 250014 - 249433 - | methyltransferase Swoo_0201 250287 - 251762 + | signal recognition particle-docking protein FtsY Swoo_0202 251804 - 252499 + | cell division ATP-binding protein FtsE Swoo_0203 252526 - 253491 + | hypothetical protein Swoo_0204 253836 - 254687 + | RNA polymerase, sigma 32 subunit, RpoH TERM 228 254713 - 254726 + F 100 -8.1 -5.71712 | opp_overlap 254713 AGTCTCAACAAAAAA CCTGC CGCG GCAGG TTTTTTTATGTCAGG TERM 229 254726 - 254713 - f 100 -8.1 -5.45652 | opp_overlap 254713 AGTCTCAACAAAAAA CCTGC CGCG GCAGG TTTTTTTATGTCAGG Swoo_0205 254874 - 255104 + | hypothetical protein Swoo_0206 256615 - 255101 - | O-succinylbenzoate-CoA ligase TERM 230 256269 - 256250 - G 79 -7.8 -4.371 | TTGATGAGATGAAAA GAGCGGAC TGTA GTGCGCTC CGCTCCAGATATAGT Swoo_0207 257679 - 256624 - | mandelate racemase/muconate lactonizing protein Swoo_0208 258458 - 257679 - | alpha/beta hydrolase fold Swoo_0209 260167 - 258458 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 231 258486 - 258504 + g 74 -11 -2.54634 | overlap 258485 258480 ATCCAGCTGGCAATT CGGGCGAT CTG ATCGCTCG CTTGCTGCTGTGGGA Swoo_0210 261265 - 260273 - | AraC family transcriptional regulator TERM 232 260849 - 260884 + g 72 -5.4 -4.58395 | overlap 260851 ATAACGACTCAGTAC GTGTTTCGGCATCTGA ATAA TCAGTTGATGAAACTC TTTTTCAAACGTGAG Swoo_0211 262290 - 261292 - | phenylacetaldoxime dehydratase Swoo_0212 263302 - 262298 - | Nitrilase TERM 233 263216 - 263226 + g 76 -4 -5.03145 | AGCAGCCTTTTCAAT CAAT TCA ATTG TTTTTTCAACCGTTG Swoo_0213 265644 - 263314 - | TonB-dependent receptor plug Swoo_0214 267944 - 265854 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Swoo_0215 268272 - 267937 - | ethyl tert-butyl ether degradation EthD Swoo_0216 269237 - 268302 - | PaaX family transcriptional regulator Swoo_0217 270397 - 269324 - | ferredoxin TERM 234 270119 - 270133 + g 71 -8.6 -3.53444 | opp_overlap 270119, overlap 270115 CAGTACCGCTAATGA TTGACC AAC GGTCAA TTGATTATTGGCAAA Swoo_0218 270992 - 270465 - | phenylacetate-CoA oxygenase, PaaJ subunit TERM 235 270942 - 270954 + g 88 -9.1 -4.44667 | TCTGGCTGCATATTC CACGG TGA CCGTG TTTATTGTTGCCGAA Swoo_0219 271758 - 271012 - | phenylacetate-CoA oxygenase, PaaI subunit Swoo_0220 272074 - 271772 - | phenylacetate-CoA oxygenase, PaaH subunit Swoo_0221 273041 - 272088 - | phenylacetate-CoA oxygenase, PaaG subunit Swoo_0222 274357 - 273155 - | beta-ketoadipyl CoA thiolase TERM 236 273317 - 273301 - G 74 -10.9 -2.71712 | overlap 273300 GTGGGTGGCCTAAAG CAATGGC TCC GCCATTG GGATTCACACGCGCG TERM 237 273772 - 273783 + g 83 -5.8 -5.18357 | opp_overlap 273772, overlap 273780 ATCGTCCTTCATCAA CTGC TGCT GCAG TTTTTTGCTGGCTTC Swoo_0223 274830 - 274354 - | thioesterase superfamily protein TERM 238 274650 - 274666 + g 75 -8.7 -3.83502 | overlap 274661 CACCATGGCAAATGT CATGGCC ATT GGTCATG TTTGATGTGACACTC Swoo_0224 275627 - 274839 - | phenylacetate degradation, enoyl-CoA hydratase paaB TERM 239 275578 - 275595 + g 73 -2.7 -5.13354 | overlap 275580 TCAGGTCGGTTTAAT TTGATAC ATGC GTATCCA TTTATTTTTTCTAAA Swoo_0225 275714 - 276313 + | regulatory PhaM protein Swoo_0226 278391 - 276340 - | phenylacetic acid degradation protein paaN TERM 240 278450 - 278469 + H 72 -5 -4.83615 | opp_overlap 278436 278450, overlap 278465 ACAGTTTTGTTAAAA GTGACACA TAAA TGTTTCAC TTTTTGTAAAAAATG Swoo_0227 278594 - 279895 + | phenylacetate-CoA ligase Swoo_0228 279921 - 280637 + | LuxR family transcriptional regulator Swoo_0229 280890 - 282257 + | amidase TERM 241 282748 - 282738 - g 79 -6.8 -4.62069 | TTTGTATGGTAAAAA CACC ATA GGTG GCGCGATTAATATTA TERM 242 284377 - 284364 - g 76 -3.8 -5.04987 | AATATGGGGAAAAAA CCTC ACTGAA GAGG TGTACATTACTCATG Swoo_0230 282283 - 284472 + | TonB-dependent receptor Swoo_0231 285123 - 286073 + | cytochrome C family protein Swoo_0232 286088 - 288094 + | outer membrane protein TERM 243 289447 - 289457 + G 72 -5.4 -4.58308 | opp_overlap 289447, overlap 289443 AGCAACCCAGTTAAA GAGA GCA TCTC TTTCTTTACTTGGTC Swoo_0233 288118 - 290634 + | anaerobic dimethyl sulfoxide reductase subunit A Swoo_0234 290649 - 291326 + | dimethylsulfoxide reductase, chain B TERM 244 291349 - 291364 + F 90 -11.8 -4.0896 | opp_overlap 291349 CCTGTGTGTATATCA GGCGCC CAAG GGCGCC TTTTAACCGAGATTT TERM 245 291364 - 291349 - f 81 -11.8 -2.62184 | opp_overlap 291349 CCTGTGTGTATATCA GGCGCC CAAG GGCGCC TTTTAACCGAGATTT Swoo_0235 291382 - 292041 + | cytoplasmic chaperone TorD family protein Swoo_0236 292049 - 292531 + | hypothetical protein TERM 246 293454 - 293467 + G 72 -3.1 -4.89009 | GTCAAATGATGTGTG CTGGA CAGC TTCAG TTTTTGCTTGCCTCT Swoo_0237 292723 - 293694 + | LysR family transcriptional regulator Swoo_0238 294671 - 293706 - | LysR family transcriptional regulator TERM 247 294640 - 294626 - G 80 -4.4 -5.25906 | ATAAATTAACAAAAA TATTAA TGC TTAATA AGTCCAAGTCACTAA Swoo_0239 295163 - 295654 + | hypothetical protein TERM 248 295701 - 295672 - f 83 -10.1 -4.00323 | overlap 295673 295675 TCAAACAGATAATAA TGAGTGCTGTAAC TTAA ATTACAGCACTCC CTCAACCCTATCACA TERM 249 295700 - 295673 - f 95 -13.6 -2.99109 | overlap 295672 295675 CAAACAGATAATAAT GAGTGCTGTAAC TTAA ATTACAGCACTC CCTCAACCCTATCAC TERM 250 295698 - 295675 - f 77 -10.4 -3.02916 | overlap 295673 295672 AACAGATAATAATGA GTGCTGTAAC TTAA ATTACAGCAC TCCCTCAACCCTATC Swoo_0240 295737 - 296210 + | formate-dependent nitrite reductase Swoo_0241 296221 - 296904 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Swoo_0242 296901 - 297842 + | cytochrome c nitrite reductase, NrfD subunit TERM 251 297931 - 297903 - T 100 -13.3 -3.65812 | opp_overlap 297905 297910 GTTTTTTGAATAGAA GATGGGCCAAA ATTTTTG TTTGGCCCATC TATCAACCAGTTAAA TERM 252 297905 - 297929 + T 74 -10.1 -2.87881 | opp_overlap 297903, overlap 297910 TTTTTGAATAGAAGA TGGGCCAAA ATTTTTG TTTGGCCCA TCTATCAACCAGTTA Swoo_0243 298391 - 297954 - | AsnC family transcriptional regulator Swoo_0244 298574 - 299839 + | amino acid permease-associated region TERM 253 299847 - 299869 + T 100 -16.4 -2.76263 | overlap 299844 TAAATTAATTGGTAT TGAGCCCAGA AAG TCTGGGCTCA TGGTTACCTGATCAA Swoo_0245 300510 - 299899 - | TonB family protein TERM 254 300840 - 300863 + r 100 -13.2 -4.00486 | opp_overlap 300839 300838 300842 CAGTTAGCGTAAAGT CAGCCAGCAT CTCA GTGCTGGCTG TTATTGTGTTATCGA TERM 255 300861 - 300842 - R 71 -9.3 -2.65354 | opp_overlap 300840, overlap 300839 300838 GTTAGCGTAAAGTCA GCCAGCA TCTCAG TGCTGGC TGTTATTGTGTTATC Swoo_0246 301321 - 300872 - | hypothetical protein Swoo_0247 301978 - 301460 - | hypothetical protein Swoo_0248 302187 - 302900 + | hypothetical protein TERM 256 302938 - 302913 - f 70 -9 -3.14977 | opp_overlap 302915, overlap 302911 302910 TAGAAGTCAAAATGA GCTCCTGGGT CACTGT ACCCAGGACC TGGATGCTCTGGAGT Swoo_0249 302961 - 304376 + | Sel1 domain-containing protein Swoo_0250 304457 - 305716 + | hypothetical protein TERM 257 305743 - 305760 + T 78 -6.9 -4.49937 | opp_overlap 305743, overlap 305738 TGGTAAAACGAAAAA CGCCTGC CAAG GCAAGCG TTTTAGTGTTATTCA TERM 258 305760 - 305743 - T 91 -9.1 -5.0925 | opp_overlap 305743 305738 TGGTAAAACGAAAAA CGCCTGC CAAG GCAAGCG TTTTAGTGTTATTCA Swoo_0251 306418 - 306056 - | hypothetical protein TERM 259 306679 - 306665 - H 74 -10 -2.66634 | overlap 306667 TATGTGATCATATCA TACGGC TTC GCCGTA AAAGCTAATTTAGCG Swoo_0252 306764 - 308635 + | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 260 308647 - 308670 + T 100 -15.4 -3.91027 | opp_overlap 308652 ATAAAGTCGTAGTTA GATGAGCCTG TTAT CAGGCTCATC TTTCATCTCTAGTTA Swoo_0253 309635 - 308679 - | LysR family transcriptional regulator TERM 261 309944 - 309968 + G 73 -9.3 -3.55061 | overlap 309942 GCGGATCGTTTTGGT CGCCGTCCAAT CGC ATTGGGTGGTG TGTTGTTGTATATCG TERM 262 309985 - 310004 + G 71 -9.3 -3.28708 | overlap 309983 GTTGTTGTATATCGC CAGCAGC ATATTG GCTGCTG TTGCTATGGAGTTTC Swoo_0254 309743 - 310945 + | Bcr/CflA subfamily drug resistance transporter TERM 263 310991 - 311023 + F 86 -5.5 -5.52986 | AAACGAAACACCCTT TGCCCGCTGACTG CTAACCA CAGGAAGTGGGCA TTTTTTTGCTCAGGT TERM 264 311330 - 311344 + G 73 -2.7 -5.06735 | opp_overlap 311330, overlap 311341 GTCACTATCTGAATA CCTGC GGTAA GCCGG TTTTTCTGGTTTATC Swoo_0255 311173 - 311697 + | DTW domain-containing protein Swoo_0256 314045 - 311934 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 265 313146 - 313169 + g 77 -4.6 -5.0538 | GGGGCGCATTTCTGT CTGTTTAATC GCTT GATTTAGCAG TTTTTTGAGATGAAA TERM 266 314483 - 314473 - g 86 -8.2 -4.74504 | AGCTTAAGTGAAAAA GCCG ATG CGGC GGACAAGCTTTCACA Swoo_0257 314362 - 314718 + | hypothetical protein Swoo_0258 314762 - 315397 + | methyltransferase type 12 TERM 267 315502 - 315485 - f 71 -8.4 -3.47349 | opp_overlap 315485 315484, overlap 315478 TCCCGAAAGTCACAA CCGCTC TTATTT GAGCGG CTTTTGTCAGCATTC TERM 268 315485 - 315502 + F 70 -8.4 -3.2362 | opp_overlap 315478 315485, overlap 315484 TCCCGAAAGTCACAA CCGCTC TTATTT GAGCGG CTTTTGTCAGCATTC Swoo_0259 315681 - 316988 + | amidohydrolase Swoo_0260 317036 - 318367 + | peptidase M16 domain-containing protein Swoo_0261 318364 - 319809 + | peptidase M16 domain-containing protein TERM 269 319945 - 319920 - f 90 -11.9 -3.79874 | opp_overlap 319920 GGGTATATAAGAGAA GGCTTGAAGTG GCAT CGCTTCAAGCC TTTTTATTTTTATCT TERM 270 319920 - 319945 + F 100 -14.1 -5.71295 | opp_overlap 319920 GGGTATATAAGAGAA GGCTTGAAGTG GCAT CGCTTCAAGCC TTTTTATTTTTATCT Swoo_0262 319928 - 320608 + | hypothetical protein Swoo_0263 320589 - 321110 + | hypothetical protein Swoo_0264 321594 - 321130 - | RNA methyltransferase TERM 271 321667 - 321650 - H 82 -8.5 -4.24948 | TGATTATACGTAAAA TATGGGA TAGA TCCCATA TCAGGGTTTGTATCA TERM 272 322440 - 322450 + G 70 -5.4 -4.30844 | overlap 322428 CGGGCAGTGCCTATA TCTG TGG CAGA TTTTGGTAGTGCAGT Swoo_0265 321747 - 322685 + | LysR family transcriptional regulator TERM 273 322674 - 322689 + F 72 -9 -3.26842 | ACCACAAAGTTGGGA GCCTTC GAAT GAAGGC TTAATACATTCTTTT TERM 274 323118 - 323162 + F 95 -13.1 -3.12895 | opp_overlap 323092 323132, overlap 323132 CTGCATTCATGTTAG GCAAAAACAAAAAAGCATCCC ACA GGGATGCTTTTTTTTGTTTGG TGTCTTGGTGAGGGG TERM 275 323132 - 323148 + F 100 -12.3 -6.25578 | opp_overlap 323132, overlap 323118 GGCAAAAACAAAAAA GCATCCC ACA GGGATGC TTTTTTTTGTTTGGT TERM 276 323148 - 323132 - f 100 -12.3 -5.93252 | opp_overlap 323132 323118 GGCAAAAACAAAAAA GCATCCC ACA GGGATGC TTTTTTTTGTTTGGT TERM 277 323205 - 323219 + F 85 -10 -4.10161 | TAACAACTTCTGCTA TCAGGC TAG GCCTGA TTTTAAGCAATCATC TERM 278 323347 - 323368 + F 74 -8.7 -3.48144 | opp_overlap 323344, overlap 323344 323350 TTTCCCCAAAACTTG ACAGCCTTC GAAT GAAGGCTGA TTACATTTTCTTGTT TERM 279 323419 - 323435 + F 81 -9.5 -3.93398 | ATTTGGTGTTGTGTT TGAAGGT CGT ACCTTCA TTGTTATCTATCGGT TERM 280 323622 - 323634 + F 70 -9.1 -3.06183 | TCATGGTTATCTATT GCCTG CCG CAGGC TTACGTGCAAATACG TERM 281 324574 - 324554 - g 80 -8.3 -4.2074 | opp_overlap 324550, overlap 324556 CTTTGAACATATAAA GAGTCTTGC GTT GCAAGACTA TAAAGTATTTGTCCA TERM 282 324572 - 324556 - g 83 -10.9 -3.70043 | opp_overlap 324550, overlap 324554 TTGAACATATAAAGA GTCTTGC GTT GCAAGAC TATAAAGTATTTGTC TERM 283 325030 - 325008 - g 71 -5 -4.57341 | overlap 325023 325024 AATCTTGTGCAAAAA TTTGAAGA GGCTAAA TCTTCAAA ATCCGACTTTGAAAG Swoo_0266 324231 - 325064 + | ATPase central domain-containing protein Swoo_0267 325088 - 325297 + | hypothetical protein TERM 284 325457 - 325447 - g 74 -4 -4.95484 | CAGGAGCAAAGAAAA TTCT AAG AGAA AATGGGATTAAATTT Swoo_0268 325308 - 325523 + | hypothetical protein TERM 285 325698 - 325679 - g 73 -3 -5.09426 | gap 1 GCGAAGGTGAAAAAA TAG-AAAGA ATA TCTTTGCTA GAAATTAGGAAATCC TERM 286 325819 - 325805 - g 72 -5.8 -4.48869 | opp_overlap 325814 325814 CAAAAATAATAGAAA TAATGA GAT TCATTA ATAGTGATGATATCT Swoo_0269 325525 - 325857 + | hypothetical protein TERM 287 325889 - 325922 + T 88 -9 -4.83032 | gap 1 CATTTAAGAGTGATT CCCAACGCATGGCAT TTTTC ATTCCAT-CGTTGGG TTTTGTGTTTACTGT TERM 288 326104 - 326083 - T 70 -8.1 -3.22388 | overlap 326075 GACTCAATGCACTAA CGCATTTCT GTCC AAAAATGCG CAATAACCAACAGGT Swoo_0270 327575 - 326697 - | radical SAM domain-containing protein TERM 289 327424 - 327468 + g 79 -6.6 -4.66833 | gap 1, opp_overlap 327424, overlap 327426 CAGGTCGCTACGCAA TCGCCGCAACTGTTACAC-AT ATCT ATGGTGTAAGGGTTGTGGCAA TTTTTGCAGTTAAAG Swoo_0271 329169 - 327598 - | hypothetical protein Swoo_0272 329481 - 330461 + | quinone oxidoreductase TERM 290 330528 - 330570 + F 85 -5.1 -5.54079 | gap 1, opp_overlap 330532 330535, overlap 330530 330533 330535 AAAACTTGTTTCTTC AAAAGCATTCGCTAAGTCAT AAGT ATGATTTAGCGAAT-CTCTC TTTTTTACTTTTTCC TERM 291 330530 - 330568 + F 80 -7.7 -4.37346 | gap 1, opp_overlap 330532 330535, overlap 330528 330533 330535 AACTTGTTTCTTCAA AAGCATTCGCTAAGTCAT AAGT ATGATTTAGCGAAT-CTC TCTTTTTTACTTTTT TERM 292 330566 - 330532 - f 79 -8.1 -4.07568 | gap 1, opp_overlap 330530 330528 330533 330535, overlap 330535 CTTGTTTCTTCAAAA GCATTCGCTAAGTCAT AAGT ATGATTTAGCGAAT-C TCTCTTTTTTACTTT TERM 293 330533 - 330566 + F 83 -10.5 -3.73212 | opp_overlap 330532 330535, overlap 330530 330528 330535 TTGTTTCTTCAAAAG CATTCGCTAAGTCAT AAGT ATGATTTAGCGAATC TCTCTTTTTTACTTT TERM 294 330564 - 330535 - f 80 -10.9 -3.08032 | opp_overlap 330533 330530 330528 330535, overlap 330532 GTTTCTTCAAAAGCA TTCGCTAAGTCAT AAGT ATGATTTAGCGAA TCTCTCTTTTTTACT TERM 295 330535 - 330564 + F 100 -13.1 -3.40898 | opp_overlap 330535 330532, overlap 330533 330530 330528 GTTTCTTCAAAAGCA TTCGCTAAGTCAT AAGT ATGATTTAGCGAA TCTCTCTTTTTTACT Swoo_0273 330754 - 332751 + | hypothetical protein TERM 296 332804 - 332778 - T 72 -7.9 -3.83502 | opp_overlap 332782, overlap 332782 GAGTGTCATATCAAA TGAAGCCCCGC TACCT GCGGGGCTTTT TTGTATAGGGATATA TERM 297 332800 - 332782 - T 100 -13.1 -3.59402 | opp_overlap 332782, overlap 332778 GTCATATCAAATGAA GCCCCGC TACCT GCGGGGC TTTTTTGTATAGGGA TERM 298 332782 - 332800 + T 100 -13.1 -5.36441 | opp_overlap 332782 332778 GTCATATCAAATGAA GCCCCGC TACCT GCGGGGC TTTTTTGTATAGGGA Swoo_0274 333949 - 333029 - | LysR family transcriptional regulator Swoo_0275 334489 - 336009 + | flavocytochrome c Swoo_0276 336038 - 336391 + | tetraheme cytochrome c TERM 299 336450 - 336475 + F 79 -9.1 -3.99461 | opp_overlap 336455, overlap 336455 TATTTCTCCCTGCAT AAAAAGGCTAC TTAG GTAGCCTTTTC TATTTTTACCTTAAT TERM 300 336470 - 336455 - f 88 -9 -4.82901 | opp_overlap 336450 336455 CTCCCTGCATAAAAA GGCTAC TTAG GTAGCC TTTTCTATTTTTACC TERM 301 336455 - 336470 + F 91 -9 -4.98672 | opp_overlap 336455, overlap 336450 CTCCCTGCATAAAAA GGCTAC TTAG GTAGCC TTTTCTATTTTTACC TERM 302 337023 - 337011 - g 77 -9.1 -3.75105 | TCAAGTGATTAATAA CGCTG ATG CAGCG AAGAAGTGTTTTGGC Swoo_0277 336664 - 337908 + | hypothetical protein Swoo_0278 338856 - 337981 - | LysR family transcriptional regulator Swoo_0279 338978 - 339646 + | TetR family transcriptional regulator Swoo_0280 341009 - 339630 - | integral membrane sensor signal transduction histidine kinase TERM 303 340541 - 340530 - G 80 -4.4 -5.29445 | GGCTAAGAAGAAAAA CCAA GGCC TTGG GTGGTGATCGGCAAA Swoo_0281 341680 - 340997 - | two component transcriptional regulator TERM 304 342174 - 342192 + G 91 -7.4 -5.23316 | opp_overlap 342168 342166 342169, overlap 342169 ATCTAAAGAGGAGCG TTCAGCGC ACC GCTCTGAA TTTTTTGCTCTCATC Swoo_0282 341911 - 342375 + | protein of unknown function Spy-related TERM 305 342526 - 342568 + G 83 -10.7 -3.58208 | gap 1, opp_overlap 342536, overlap 342523 CCAATACGATTTCTG GGTCAAGTTAGCTAGCCGCG CAGC TGTGGCTA-CTGCCTTGACC TTAGTTATTATCAAA Swoo_0283 342497 - 343366 + | cation diffusion facilitator family transporter TERM 306 344523 - 344501 - T 72 -9.2 -2.87527 | opp_overlap 344506 344517, overlap 344500 CAGCGAGGAGGAAAG GTTAACGGTT AAT AACCGTTAGC TGTGACGTTACTCGC TERM 307 345574 - 345555 - T 71 -9.2 -2.65808 | opp_overlap 345561 345570, overlap 345552 AGTCGTAACAAGGTA GCCCTAGG GGAA CCTGGGGC TGGATCACCTCCTTA TERM 308 346503 - 346491 - T 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 309 347301 - 347285 - T 75 -8 -4.08546 | overlap 347298 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 310 347807 - 347796 - T 71 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 311 349195 - 349154 - T 95 -14 -3.02511 | gap 1, opp_overlap 349163, overlap 349163 TCCAGGCGCCTAATA CACGAAAAA-GCCCTAGCA GAAAA CGCTAGGGCTTTTTTCGTA TATACGCTCCGCGAA TERM 312 349185 - 349163 - T 93 -11.3 -4.87807 | opp_overlap 349163, overlap 349154 CTAATACACGAAAAA GCCCTAGCA GAAAA CGCTAGGGC TTTTTTCGTATATAC TERM 313 349163 - 349185 + T 100 -10.6 -5.24989 | opp_overlap 349163 349154 CTAATACACGAAAAA GCCCTAGC AGAAAAC GCTAGGGC TTTTTTCGTATATAC TERM 314 349259 - 349271 + T 72 -9.1 -3.35798 | GGGACCTCCAGTTCA GCGAC TAC GTCGC TTCTCGCTACAAAGT TERM 315 349479 - 349501 + T 87 -10.6 -4.35524 | opp_overlap 349481, overlap 349481 CCTATTTAAGTAGAG AAGCCACCTT ATT AAGGTGGCTG TTTTGCGTTTGGGGC TERM 316 349499 - 349481 - T 100 -13.2 -3.60661 | opp_overlap 349479 349481 TATTTAAGTAGAGAA GCCACCTT ATT AAGGTGGC TGTTTTGCGTTTGGG TERM 317 349481 - 349499 + T 100 -13.2 -3.78026 | opp_overlap 349481, overlap 349479 TATTTAAGTAGAGAA GCCACCTT ATT AAGGTGGC TGTTTTGCGTTTGGG Swoo_0284 350372 - 349707 - | HAD family hydrolase TERM 318 349769 - 349785 + g 74 -3.7 -4.95758 | ATTGCTTATGAGCGA TGATCCA TTT TTGATCA TTTTTCTGCTCTGGT Swoo_0285 350786 - 353383 + | aconitate hydratase 2 TERM 319 353408 - 353449 + T 100 -9.8 -5.1848 | gap 3, opp_overlap 353417, overlap 353417 TGTAGAGTGAGTTAA CAG-T-C-AAAAGGCCAGCTT ATT AAGCTGGCCTTTTTGTATCTG TTTTTTAGGTTACTT TERM 320 353437 - 353417 - T 100 -15.5 -4.28656 | opp_overlap 353408 353417 AGTTAACAGTCAAAA GGCCAGCTT ATT AAGCTGGCC TTTTTGTATCTGTTT TERM 321 353417 - 353437 + T 100 -15.5 -5.1104 | opp_overlap 353417, overlap 353408 AGTTAACAGTCAAAA GGCCAGCTT ATT AAGCTGGCC TTTTTGTATCTGTTT Swoo_0286 353992 - 353525 - | regulator of RpoD, Rsd/AlgQ TERM 322 354159 - 354195 + H 74 -8.7 -3.67175 | opp_overlap 354163 354164, overlap 354157 354161 354162 GAATCGGTTAAAAAT AAAATGCCCAGCGATAA ATG TTATCGCTGGGCGAGTA TTGGTTTTGCGGGCT TERM 323 354161 - 354193 + H 83 -11.3 -3.41359 | opp_overlap 354163 354164, overlap 354159 354157 354162 ATCGGTTAAAAATAA AATGCCCAGCGATAA ATG TTATCGCTGGGCGAG TATTGGTTTTGCGGG TERM 324 354162 - 354192 + H 100 -14.8 -2.64333 | opp_overlap 354163 354164, overlap 354161 354159 354157 TCGGTTAAAAATAAA ATGCCCAGCGATAA ATG TTATCGCTGGGCGA GTATTGGTTTTGCGG TERM 325 354191 - 354163 - H 100 -16.1 -5.26119 | opp_overlap 354162 354161 354159 354157, overlap 354164 CGGTTAAAAATAAAA TGCCCAGCGATAA ATG TTATCGCTGGGCG AGTATTGGTTTTGCG TERM 326 354190 - 354164 - H 100 -19.6 -3.74587 | opp_overlap 354162 354161 354159 354157, overlap 354163 GGTTAAAAATAAAAT GCCCAGCGATAA ATG TTATCGCTGGGC GAGTATTGGTTTTGC TERM 327 354414 - 354430 + H 72 -5.9 -4.371 | opp_overlap 354414 354417 TGTTTGTCACATAAA TGATCTC AAG GAGATTA TTTTACTCTCGTAAA Swoo_0287 354494 - 355558 + | uroporphyrinogen decarboxylase TERM 328 355581 - 355600 + T 91 -9.3 -5.06414 | opp_overlap 355578 355581 ACTAGTTATAATTGA GCCCATC CTGTGT GATGGGC TTTTTATTGCGCCGA TERM 329 355600 - 355581 - T 71 -9.3 -2.60808 | opp_overlap 355581, overlap 355578 ACTAGTTATAATTGA GCCCATC CTGTGT GATGGGC TTTTTATTGCGCCGA Swoo_0288 357117 - 355636 - | integral membrane sensor signal transduction histidine kinase Swoo_0289 357848 - 357117 - | two component transcriptional regulator Swoo_0290 358661 - 357930 - | hypothetical protein Swoo_0291 359376 - 358672 - | hypothetical protein TERM 330 359780 - 359794 + G 79 -7.8 -4.36433 | overlap 359772 TTGGCTTCTGTCTTC CGGCAG TTA TTGCCG TTTCTTACTGTTTAA Swoo_0292 359731 - 362343 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 331 363215 - 363188 - g 81 -10.6 -3.5361 | opp_overlap 363188 363190 GAATGATCGATAGAA TGGCCCGAAGAG CAAG CTCTTCAGGCTA TTAGATGCTTCAAAC TERM 332 363188 - 363215 + G 78 -10.6 -3.13164 | opp_overlap 363188, overlap 363190 GAATGATCGATAGAA TGGCCCGAAGAG CAAG CTCTTCAGGCTA TTAGATGCTTCAAAC TERM 333 363190 - 363213 + G 76 -11 -3.12595 | opp_overlap 363188, overlap 363188 ATGATCGATAGAATG GCCCGAAGAG CAAG CTCTTCAGGC TATTAGATGCTTCAA Swoo_0293 362416 - 363219 + | short-chain dehydrogenase/reductase SDR Swoo_0294 363477 - 363253 - | hypothetical protein TERM 334 363599 - 363625 + r 71 -8.1 -3.44146 | opp_overlap 363605, overlap 363605 AAAGCTTTGGATATA AAAAAACCGGT TAAAT ACCGGTTTTTA TTCATTATAGAAAGA TERM 335 363605 - 363619 + r 91 -7.1 -5.2204 | opp_overlap 363605, overlap 363599 TTGGATATAAAAAAA CCGGT TAAAT ACCGG TTTTTATTCATTATA TERM 336 363619 - 363605 - R 100 -7.1 -5.71712 | opp_overlap 363605 363599 TTGGATATAAAAAAA CCGGT TAAAT ACCGG TTTTTATTCATTATA Swoo_0295 364933 - 363641 - | phosphoribosylamine--glycine ligase TERM 337 363806 - 363835 + g 71 -7.9 -3.73725 | overlap 363807 AGTTACCACATGGCC ATCTTTCATGCTG GTGC CAGCGTGGAAGAC TTTAGCATTATTGTT TERM 338 363807 - 363834 + g 77 -11.4 -2.8315 | overlap 363806 GTTACCACATGGCCA TCTTTCATGCTG GTGC CAGCGTGGAAGA CTTTAGCATTATTGT Swoo_0296 366713 - 365106 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Swoo_0297 367119 - 367598 + | MerR family transcriptional regulator TERM 339 367863 - 367885 + G 76 -10.6 -3.06501 | ACCTCTTTTTTGGTC TCTACTCCTG AAA CAGGCGTAGA TTCAGTGACAGTGTC Swoo_0298 367602 - 368873 + | permease TERM 340 368900 - 368920 + T 89 -6.1 -5.626 | opp_overlap 368900 GAGTATTAAACTAAG CCAGTTGAT TGT ATCCGCTGG TTTTTTTGTGCAATA Swoo_0299 369373 - 368969 - | mutator MutT protein Swoo_0300 369589 - 369377 - | hypothetical protein Swoo_0301 370399 - 369665 - | hypothetical protein TERM 341 369739 - 369749 + g 82 -6.8 -4.9792 | opp_overlap 369739 ATTGAACAAAATGAA TCGC AAA GCGA TTTTTGTGTCCACTG Swoo_0302 371013 - 370408 - | dephospho-CoA kinase Swoo_0303 371962 - 371051 - | prepilin peptidase TERM 342 371896 - 371879 - G 76 -8.3 -3.95787 | GACGACATTGAGAAA GCTGCCG ATAA CGGCTGC AAAAACAAAACTAAT TERM 343 371939 - 371921 - G 77 -9.6 -3.64162 | overlap 371914 371911 371932 ACTAATCATGGCAAA GAGCCACA AAT TATGGCTC ATAGTGGAGATAAAT Swoo_0304 375205 - 372533 - | type III restriction protein res subunit TERM 344 373533 - 373552 + g 71 -2.2 -5.08169 | overlap 373537 CTCTGGTTATGCATC TTGATAGA TCTT TCTATTGA TTTTTTAGGCTCTAT Swoo_0305 376740 - 375208 - | DNA methylase N-4/N-6 domain-containing protein Swoo_0306 379182 - 377050 - | AAA ATPase TERM 345 377838 - 377810 - G 91 -11.2 -3.85704 | gap 1, overlap 377802 GCATGAAGTACTAAA CCAGCACCAATTG GCGG CAATTGGT-CTGG ATCACCGATAAGCAC TERM 346 378252 - 378264 + g 76 -4.1 -5.13521 | GAAATGACCACGCTT CTAGT TTA GCTAG TTTTTTGAATCGTTT Swoo_0307 379604 - 379179 - | hypothetical protein TERM 347 379292 - 379303 + g 70 -5.8 -4.30161 | overlap 379286 379286 TCATCTCTTGCTCAA GGCT GGTG AGCC TTTGCTTTTCTCTAA Swoo_0308 380128 - 379652 - | hypothetical protein Swoo_0309 382828 - 380132 - | hypothetical protein TERM 348 381818 - 381830 + g 76 -2.7 -5.19916 | GTTTGGCTTACGCTT TAGTT TCC AGCTA TTTTTTACCTCTTTT TERM 349 382615 - 382637 + g 76 -4.2 -5.10208 | TGATTGCCCTAGACA CAAAAGGGTT GAA GACTTTTTTG TTTTTCTTGGACTTG Swoo_0310 384551 - 382812 - | integrase family protein TERM 350 382999 - 383019 + g 74 -3.2 -5.06414 | overlap 382997 TGTAGACTTTTAAGC TGCTGGTG ATGAC CTTCAGCA TTTTTATTCGGGCAA Swoo_0311 385779 - 384553 - | integrase family protein TERM 351 385183 - 385171 - G 71 -4.1 -4.74801 | CAATGTCATGAAAAA GCAAA AAT TTCGC CATCTAACTTTTTCA Swoo_0312 387261 - 385999 - | type II secretion system protein Swoo_0313 389024 - 387315 - | type IV-A pilus assembly ATPase PilB TERM 352 389095 - 389047 - R 75 -7.6 -4.10552 | gap 1, opp_overlap 389052 389057 389059, overlap 389048 389057 CCTTAGTAAAGGAAA TTCTACAGCACAGCAGTACTAAC TTCA GTTTGCACTGCTGTG-TGTACAT TGAAACTAAATTCTT TERM 353 389094 - 389048 - R 80 -11.1 -3.05849 | gap 1, opp_overlap 389052 389057 389059, overlap 389047 389057 CTTAGTAAAGGAAAT TCTACAGCACAGCAGTACTAAC TTCA GTTTGCACTGCTGTG-TGTACA TTGAAACTAAATTCT TERM 354 389052 - 389090 + r 73 -9.7 -2.53263 | gap 1, opp_overlap 389048 389047 389057, overlap 389057 389059 GTAAAGGAAATTCTA CAGCACAGCAGTACTAAC TTCA GTTTGCACTGCTGTG-TG TACATTGAAACTAAA TERM 355 389086 - 389057 - R 81 -11.5 -2.65766 | opp_overlap 389052 389057 389059, overlap 389048 389047 GGAAATTCTACAGCA CAGCAGTACTAAC TTCA GTTTGCACTGCTG TGTGTACATTGAAAC TERM 356 389057 - 389086 + r 73 -9.3 -2.94912 | opp_overlap 389057 389048 389047, overlap 389052 389059 GGAAATTCTACAGCA CAGCAGTACTAAC TTCA GTTTGCACTGCTG TGTGTACATTGAAAC Swoo_0314 389552 - 389109 - | general secretion pathway protein TERM 357 389511 - 389495 - G 72 -9.5 -3.21695 | opp_overlap 389493 389498, overlap 389498 CGATCATTAATTCAA TAAGGGT GAA ACCCTTA GCTTGCTTGTTTAGC TERM 358 390195 - 390212 + r 70 -2.7 -5.1615 | overlap 390199 CTGCAAAATTATGTT TGGTTTA ACAA TTAACCA TTTTTTAAGTGTTAA TERM 359 390199 - 390234 + r 83 -3.6 -5.61913 | gap 1, overlap 390195 AAAATTATGTTTGGT TTAACAATTAACCATTT TTT AAGTG-TTAAATGTTAA TTTTTTGTGTTTCTT TERM 360 390348 - 390325 - R 75 -9.6 -3.27503 | opp_overlap 390322 390325, overlap 390323 TGAATAGAGAAGACA GAGCCTGTGA CTAT TTACAGGCTC TTATTTTAGCTCTCT TERM 361 390325 - 390348 + r 93 -11.8 -4.24602 | opp_overlap 390325 390323, overlap 390322 TGAATAGAGAAGACA GAGCCTGTGA CTAT TTACAGGCTC TTATTTTAGCTCTCT Swoo_0315 391283 - 390393 - | nicotinate-nucleotide pyrophosphorylase Swoo_0316 391549 - 392121 + | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Swoo_0317 392174 - 393028 + | signaling modulator of AmpD, AmpE TERM 362 393042 - 393053 + F 79 -7.2 -4.61873 | opp_overlap 393030 393042, overlap 393022 AAACCCATTTCGAAA GGGC TGAG GCCC TTTTAATTTATCAAA Swoo_0318 393416 - 394168 + | regulatory protein GntR HTH TERM 363 394582 - 394603 + G 74 -6.7 -4.41897 | gap 1, overlap 394585 CTTCTTTCCAGTCTG CAG-CTTCAT TTT ATGAAGTCTG TTTTAATCATTTCTT Swoo_0319 394245 - 396908 + | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type Swoo_0320 396922 - 398775 + | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 364 398783 - 398803 + F 100 -15.5 -5.22289 | opp_overlap 398783 TTCTATAATATTAAA GGCTGCGTA ATA TACGCAGCC TTTTTATATTTCGTA TERM 365 398803 - 398783 - f 100 -15.5 -3.97088 | opp_overlap 398783 TTCTATAATATTAAA GGCTGCGTA ATA TACGCAGCC TTTTTATATTTCGTA Swoo_0321 398956 - 400386 + | dihydrolipoamide dehydrogenase TERM 366 400396 - 400380 - f 75 -2.3 -5.38549 | opp_overlap 400380 GGCAAAGAAGAAAAA GAAGT AGTTTGA ACTTC TTGTAATATAAAGGC TERM 367 400425 - 400409 - f 100 -13.7 -4.1891 | opp_overlap 400409 TTCTTGTAATATAAA GGCGCTC ATT GAGCGCC TTTTTTGTGGGTGAT TERM 368 400409 - 400425 + F 100 -13.7 -5.28778 | opp_overlap 400409 TTCTTGTAATATAAA GGCGCTC ATT GAGCGCC TTTTTTGTGGGTGAT TERM 369 401783 - 401798 + G 71 -4 -4.87665 | gap 1, opp_overlap 401783 TTGTCCATAAAGAGA CGCT-TG AAT CACAGCG TTTTTCTCAGTGGAG TERM 370 402081 - 402093 + G 71 -7.7 -3.84514 | TGGAGTCTTCCATTC GATGC TAA GCATC TTTGATGGTTCAAAT TERM 371 402493 - 402483 - g 71 -4 -4.75404 | opp_overlap 402467, overlap 402467 AAACCGCATTAAAAA TGAT GGG ATCA TGCTTGAATCGGTTT Swoo_0322 400531 - 404976 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Swoo_0323 405095 - 407302 + | patatin TERM 372 408185 - 408205 + G 73 -6.2 -4.3295 | gap 1, opp_overlap 408185 408188, overlap 408188 ATGAATAGAGCAGAA CTACAGGCA AGTA TGCCTG-AG TTTGATTTTGTTCAG Swoo_0324 407396 - 409450 + | endothelin-converting protein 1 TERM 373 409472 - 409501 + F 100 -18.1 -4.13014 | opp_overlap 409472 409476, overlap 409476 GATAAAGTCTATAAA TAAAGAGCCCATC GTTT GATGGGCTCTTTA TTTTCAAGCTGTAAA TERM 374 409501 - 409472 - f 100 -18.1 -3.96291 | opp_overlap 409472 409476, overlap 409476 GATAAAGTCTATAAA TAAAGAGCCCATC GTTT GATGGGCTCTTTA TTTTCAAGCTGTAAA TERM 375 409476 - 409497 + F 100 -14.5 -4.65933 | opp_overlap 409472 409476, overlap 409472 AAGTCTATAAATAAA GAGCCCATC GTTT GATGGGCTC TTTATTTTCAAGCTG TERM 376 409497 - 409476 - f 100 -14.5 -4.56969 | opp_overlap 409476 409472, overlap 409472 AAGTCTATAAATAAA GAGCCCATC GTTT GATGGGCTC TTTATTTTCAAGCTG TERM 377 409789 - 409762 - f 78 -10.8 -2.85706 | opp_overlap 409764 409766, overlap 409759 409757 409764 TTAACAAAGAGATGA GAGATTAACTTC TTTG GAAATTAATCTC TGGTGACAAACGCTT TERM 378 410679 - 410657 - f 72 -9.2 -2.87527 | opp_overlap 410662 410673, overlap 410656 CAGCGAGGAGGAAAG GTTAACGGTT AAT AACCGTTAGC TGTGACGTTACTCGC TERM 379 411729 - 411710 - f 71 -9.2 -2.65808 | opp_overlap 411716 411725, overlap 411707 AGTCGTAACAAGGTA GCCCTAGG GGAA CCTGGGGC TGGATCACCTCCTTA TERM 380 412540 - 412528 - f 83 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 381 413338 - 413322 - f 75 -8 -4.08546 | overlap 413335 ATGAGTAACGATAAA GGGAGT GAAAA ACTCCC TCGCCGAAAGACCAA TERM 382 413844 - 413833 - f 71 -4.4 -4.7254 | ACTGTTTATCAAAAA CACA GTAC TGTG CAAACTCGCAAGAGG TERM 383 415231 - 415190 - f 95 -14 -3.02511 | gap 1, opp_overlap 415199, overlap 415199 TCCAGGCGCCTAATA CACGAAAAA-GCCCTAGCA GAAAA CGCTAGGGCTTTTTTCGTA TATACGCTCCGCGAA TERM 384 415199 - 415221 + F 100 -10.6 -5.24989 | opp_overlap 415199 415190 CTAATACACGAAAAA GCCCTAGC AGAAAAC GCTAGGGC TTTTTTCGTATATAC TERM 385 415221 - 415199 - f 93 -11.3 -4.87807 | opp_overlap 415199, overlap 415190 CTAATACACGAAAAA GCCCTAGCA GAAAA CGCTAGGGC TTTTTTCGTATATAC TERM 386 415295 - 415307 + F 72 -9.1 -3.35798 | GGGACCTCCAGTTCA GCGAC TAC GTCGC TTCTCGCTACAAAGT Swoo_0325 416278 - 417552 + | competence/damage-inducible protein CinA TERM 387 417588 - 417610 + T 100 -9.2 -5.42514 | opp_overlap 417588 ATTAGATACAAAAAA TGCAATCAAC TAA GCTGATTGCA TTTTTTAGTTTATGG TERM 388 417610 - 417588 - T 100 -11.4 -5.43414 | opp_overlap 417588 ATTAGATACAAAAAA TGCAATCAAC TAA GCTGATTGCA TTTTTTAGTTTATGG Swoo_0326 418187 - 417645 - | hypothetical protein Swoo_0327 420823 - 418187 - | phosphoenolpyruvate carboxylase TERM 389 419427 - 419415 - G 77 -9.1 -3.82664 | ATAGAGATAACATAA GAGCC TAG GGCTC GTGCGGGTTGAGTCG Swoo_0328 422118 - 420967 - | acetylornithine deacetylase (ArgE) Swoo_0329 422392 - 423372 + | N-acetyl-gamma-glutamyl-phosphate reductase Swoo_0330 423395 - 424180 + | acetylglutamate kinase Swoo_0331 424269 - 425177 + | ornithine carbamoyltransferase Swoo_0332 425242 - 426468 + | argininosuccinate synthase TERM 390 426532 - 426504 - f 70 -5.9 -4.26351 | opp_overlap 426510, overlap 426510 TATTAAGTTAATAAA TTAAATGGGGCGC TAA GCGTCCCTTTTTA CAGAACAAGAGGAAC TERM 391 426526 - 426510 - f 74 -9.3 -3.11962 | opp_overlap 426510, overlap 426504 GTTAATAAATTAAAT GGGGCGC TAA GCGTCCC TTTTTACAGAACAAG TERM 392 426510 - 426526 + F 100 -11.5 -4.56597 | opp_overlap 426510 426504 GTTAATAAATTAAAT GGGGCGC TAA GCGTCCC TTTTTACAGAACAAG Swoo_0333 426553 - 427923 + | argininosuccinate lyase TERM 393 428016 - 428044 + T 100 -14.7 -4.74801 | opp_overlap 428016 ATATTGATGATTAAA GCACGAAAGGTTG AAC TAGCCTTTCGTGC TTTTTAATGGAGTTA TERM 394 428044 - 428016 - T 86 -11.8 -3.80014 | opp_overlap 428016 ATATTGATGATTAAA GCACGAAAGGTT GAACT AGCCTTTCGTGC TTTTTAATGGAGTTA Swoo_0334 430616 - 428073 - | 1A family penicillin-binding protein TERM 395 430896 - 430874 - g 70 -2.6 -4.93877 | overlap 430878 TCCCACGAAATAAAA GCAATCTTGC TGA GTAAGACGGC CGATGGTTATAAAAT Swoo_0335 430802 - 431881 + | type IV pilus assembly protein PilM Swoo_0336 431869 - 432450 + | fimbrial assembly family protein Swoo_0337 432447 - 433064 + | pilus assembly protein PilO Swoo_0338 433064 - 433579 + | pilus assembly protein PilP TERM 396 433660 - 433673 + G 87 -8.1 -4.98255 | GCTATCTAGGCTGGT GGGCT GTTT AGCCC TTTTTATCATTGGGA TERM 397 435317 - 435305 - g 74 -3.3 -5.03314 | opp_overlap 435294 435293 GTTAGCTTTAAAAAA GCGGT TTT ATCGC TTAGGGTTACACCAC Swoo_0339 433601 - 435649 + | type IV pilus secretin PilQ TERM 398 435673 - 435691 + F 100 -11 -5.77571 | opp_overlap 435668 435673 CATTATGATATAAAA CCAGCATC TAA GGTGCTGG TTTTTATTTTTTAAT TERM 399 435691 - 435673 - f 86 -8.8 -4.58424 | opp_overlap 435673, overlap 435668 CATTATGATATAAAA CCAGCATC TAA GGTGCTGG TTTTTATTTTTTAAT Swoo_0340 435868 - 436383 + | shikimate kinase TERM 400 436465 - 436481 + G 86 -12.3 -3.14931 | ATTTGATGAGTTGTG GCGAGCA TTT TGCTCGC TTCCTCCAAGATAAA TERM 401 436674 - 436664 - g 70 -5.4 -4.37502 | ATTACTACAGCAAAA CTCT GGC AGAG ACACCGTTCTTATTG Swoo_0341 436392 - 437468 + | 3-dehydroquinate synthase TERM 402 437904 - 437919 + G 72 -3.2 -4.9792 | overlap 437906 AATCTCGATCACACT CACTTC AACT GAAGAG TTTTTCTATCACCTG Swoo_0342 437485 - 438879 + | sporulation domain-containing protein TERM 403 439400 - 439374 - g 70 -9.6 -2.96274 | opp_overlap 439379 TTCCTGAGAATGAGA TCCGTGCTTTTT CTG AAAAAGCACAAA AAGCTGAATTCAAGT Swoo_0343 438929 - 439768 + | DNA adenine methylase TERM 404 439786 - 439769 - T 78 -9.9 -3.37935 | opp_overlap 439779, overlap 439779 AGTGAAAATGATTAA GCCTAGT CAAT ACTAGGC AAGTACTTGATTAAC Swoo_0344 439966 - 439781 - | hypothetical protein TERM 405 439950 - 439975 + g 95 -3.4 -5.65513 | overlap 439953 CTCGAAAATAACTGC CAAGCTTTAA ATAGCA TTAAAGCTTA TTTTTTTGATTACTA TERM 406 439953 - 439972 + g 77 -5.1 -4.88485 | overlap 439950 GAAAATAACTGCCAA GCTTTAA ATAGCA TTAAAGC TTATTTTTTTGATTA Swoo_0345 440319 - 439966 - | hypothetical protein Swoo_0346 440529 - 441203 + | ribulose-phosphate 3-epimerase Swoo_0347 441207 - 441914 + | phosphoglycolate phosphatase Swoo_0348 441911 - 442918 + | tryptophanyl-tRNA synthetase TERM 407 442939 - 442957 + T 100 -11.7 -5.52096 | opp_overlap 442939 TGTGATTTAATGAAA GCCAGCG ATACA CGCTGGC TTTTTTATTGGCTTT TERM 408 442957 - 442939 - T 90 -11.7 -3.93288 | opp_overlap 442939 TGTGATTTAATGAAA GCCAGCG ATACA CGCTGGC TTTTTTATTGGCTTT Swoo_0349 443634 - 443065 - | transport-associated protein TERM 409 443725 - 443702 - R 72 -7.4 -3.90291 | opp_overlap 443721 AGGCGTTGAACTAAA GCCACCAAAA TATT TGCTGGTGGC TAAACACTTTATCCC Swoo_0350 444337 - 443750 - | phosphoheptose isomerase Swoo_0351 444771 - 444418 - | hypothetical protein Swoo_0352 446672 - 444768 - | LppC family lipoprotein TERM 410 447543 - 447525 - g 71 -2.3 -5.08824 | gap 1, overlap 447528 447529 TTGCCATTGAAAAAA GCATCCGC ATTA GCGGG-GC AGATCCATGGTATGA Swoo_0353 446760 - 447602 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 411 448060 - 448039 - f 86 -10.1 -4.35461 | opp_overlap 448039 CTAATATCACGAAAA CCGCATCTC GAAA GGGATGCGG TTTTTTGTTTTTATC TERM 412 448039 - 448060 + F 100 -12.3 -5.98675 | opp_overlap 448039 CTAATATCACGAAAA CCGCATCTC GAAA GGGATGCGG TTTTTTGTTTTTATC TERM 413 448681 - 448670 - g 77 -2.2 -5.45652 | ATCGTGAAGAAAAAA CACA CTAT TGCG AAACACCTGCTTATA Swoo_0354 448393 - 449190 + | hypothetical protein TERM 414 450436 - 450417 - g 71 -8 -3.81 | opp_overlap 450420, overlap 450420 ATTAGTTGATAACAA TAATAACC TAAA GGTTATTA TGACTGAAAGCTCAG Swoo_0355 449257 - 450783 + | hypothetical protein TERM 415 450849 - 450814 - f 90 -12 -3.78329 | opp_overlap 450819, overlap 450819 TCCTACTAACCTAAA CAAAAGCCCATTCACC TTTC GGCAAATGGGCTTTTT ATATCAGACAAAATA TERM 416 450819 - 450844 + F 86 -7.5 -4.96848 | opp_overlap 450814 450819 CTAACCTAAACAAAA GCCCATTCACC TTTC GGCAAATGGGC TTTTTATATCAGACA TERM 417 450844 - 450819 - f 100 -11.9 -4.94058 | opp_overlap 450819, overlap 450814 CTAACCTAAACAAAA GCCCATTCACC TTTC GGCAAATGGGC TTTTTATATCAGACA TERM 418 451483 - 451521 + F 81 -3.4 -5.56264 | gap 2, opp_overlap 451476 ATTGAACATCTACAG TAGAGCC-GCTAT-GTTA TTGAT TAATTATGGCTGGCTCTA TTTTTTCTATTTAGA TERM 419 451692 - 451661 - g 81 -2.4 -5.47218 | overlap 451663 451681 GCTGAGTTAAAAAAA TGCCTTTTAGAGCA TCAA TACTCTAAAAAAGA GGTTAAATATATGGA TERM 420 451927 - 451906 - g 90 -4.5 -5.5353 | gap 1, opp_overlap 451907 451911, overlap 451908 TATATTAATAAAAAA TAGAAGTCGA TTG TCGACT-CCA TTAAATGCGACTGAA TERM 421 451926 - 451908 - g 86 -9.6 -4.39002 | opp_overlap 451907 451911, overlap 451906 TATTAATAAAAAATA GAAGTCGA TTG TCGACTCC ATTAAATGCGACTGA Swoo_0357 451592 - 452944 + | hypothetical protein TERM 422 453077 - 453056 - T 83 -10.9 -3.53712 | opp_overlap 453055 453058, overlap 453052 ATCCTGAATAACTAA GACACCCAC AATT GTGGATGTC AGTTTCCTCTACTAG Swoo_0358 454633 - 453116 - | hypothetical protein Swoo_0359 456290 - 454782 - | hypothetical protein TERM 423 456500 - 456465 - R 90 -12 -3.78329 | opp_overlap 456470, overlap 456470 TCCTACTAACCTAAA CAAAAGCCCATTCACC TTTC GGCAAATGGGCTTTTT ATATCAGAAACTAAG TERM 424 456495 - 456470 - R 100 -11.9 -4.94058 | opp_overlap 456470, overlap 456465 CTAACCTAAACAAAA GCCCATTCACC TTTC GGCAAATGGGC TTTTTATATCAGAAA TERM 425 456470 - 456495 + r 86 -7.5 -4.96848 | opp_overlap 456470 456465 CTAACCTAAACAAAA GCCCATTCACC TTTC GGCAAATGGGC TTTTTATATCAGAAA Swoo_0360 457171 - 456518 - | signal peptidase I TERM 426 456670 - 456686 + g 72 -7.3 -4.07885 | TGCGGCGGTTATCTC CCATTAC CAT GTAGTGG TTTTCAGGGACGGTG Swoo_0361 458021 - 457284 - | AraC family transcriptional regulator TERM 427 457346 - 457335 - G 71 -2.2 -5.03145 | TAATTCGCCAAAAAA CAGC CTGA ACTG TTTGCTGAAGTAGCT TERM 428 457510 - 457494 - G 77 -10.1 -3.55761 | GAGGTATTTTTTAAA GCGCCTC TCT AAGGCGC TGACAGAGAGGTGAG TERM 429 457693 - 457751 + g 79 -11.4 -3.07307 | gap 3, opp_overlap 457714, overlap 457711 457714 TGATTTGAGAGTGGA CGTTTGGAGGTGG-CAT-AC-CAAGCTGG ATCG CCAGCTTGTGTCATGTTCATCTCTAAGCG TTCAGTGACAGTTTG TERM 430 457711 - 457730 + g 80 -12.2 -2.94062 | opp_overlap 457714, overlap 457693 457714 TTGGAGGTGGCATAC CAAGCTGG ATCG CCAGCTTG TGTCATGTTCATCTC TERM 431 458922 - 458904 - g 71 -8.8 -3.55622 | overlap 458920 458921 TCTAACGGTGCTAAA GGCGTGCT ATT AGCAAGCC AAGTGGCCCTTGGTG Swoo_0362 458151 - 459341 + | oxidoreductase domain-containing protein TERM 432 459676 - 459662 - g 85 -7.8 -4.63527 | overlap 459667 CGAGGAGGTTAAAAA CAAGCC TCA GGCTCG AGCTCAGTGGGCGGT TERM 433 459794 - 459808 + G 70 -7.1 -3.90112 | CGCTTACCCCTGGCC CCAGC GCCCA GCTGG TTTGGTTGAGGAGGG Swoo_0363 459342 - 460394 + | xylose isomerase domain-containing protein TERM 434 460628 - 460610 - g 71 -9 -3.32844 | opp_overlap 460604 460610 CGGCTTACTGTATAA CTTTTTAG GGG CTAAAAAG TTAGTGCTTATCGCT TERM 435 460610 - 460628 + G 71 -9 -3.30741 | opp_overlap 460610, overlap 460604 CGGCTTACTGTATAA CTTTTTAG GGG CTAAAAAG TTAGTGCTTATCGCT Swoo_0364 460404 - 461651 + | major facilitator transporter Swoo_0365 461743 - 462597 + | xylose isomerase domain-containing protein TERM 436 462635 - 462625 - f 76 -5.4 -4.92363 | AAACAGCGATAAAAA CAGT TTA ACTG TGTGAGGGAGTGCAA Swoo_0366 462650 - 463369 + | hypothetical protein TERM 437 463964 - 463950 - g 72 -5.6 -4.56597 | overlap 463952 GGCTGCGGCGAAAAA GTTGGG TAT CCCCAC TGCGCCTATGCATCG Swoo_0367 463369 - 465066 + | glucose-methanol-choline oxidoreductase Swoo_0368 465068 - 465811 + | hypothetical protein TERM 438 465856 - 465831 - T 100 -14.1 -5.0133 | opp_overlap 465816 465831 TACGTGCCTAAAAAA GCCCGTATGCT GTTA AACATACGGGC TTTTTCATTTAAACC TERM 439 465831 - 465856 + T 100 -11.9 -4.98531 | opp_overlap 465831, overlap 465816 TACGTGCCTAAAAAA GCCCGTATGCT GTTA AACATACGGGC TTTTTCATTTAAACC Swoo_0369 467115 - 465907 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 440 467078 - 467061 - G 80 -8.4 -4.23892 | CTGAACGACCTAAAA GGCTGG CAAGTT CCAGCC CAGCAGCACCGCCAC Swoo_0371 468075 - 468692 + | HAD family hydrolase Swoo_0372 469650 - 468772 - | LysR family transcriptional regulator TERM 441 468944 - 468967 + g 70 -6 -4.258 | TGTAAATAGTAGTCA GGGAGTTGAA TTAT TCCAATTCCC TTTATTGCTGCGTCG Swoo_0373 470042 - 470599 + | S-(hydroxymethyl)glutathione synthase TERM 442 470618 - 470645 + F 75 -10 -2.99545 | opp_overlap 470625 470626, overlap 470625 470626 CAATTGGTTTATGAG TAAAAAAGGCGC TTCG GCGCTTTTTTTG TATCTGCTATATAGG TERM 443 470638 - 470625 - f 76 -3.7 -5.1861 | opp_overlap 470618 470625 470626, overlap 470626 TTTATGAGTAAAAAA GGCGC TTCG GCGCT TTTTTTGTATCTGCT TERM 444 470626 - 470637 + F 100 -7.2 -5.76633 | opp_overlap 470626 470625, overlap 470625 470618 TTATGAGTAAAAAAG GCGC TTCG GCGC TTTTTTTGTATCTGC Swoo_0374 470919 - 471185 + | TraR/DksA family transcriptional regulator Swoo_0375 471384 - 472514 + | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Swoo_0376 472574 - 473443 + | S-formylglutathione hydrolase TERM 445 473491 - 473468 - f 84 -11 -3.86684 | opp_overlap 473468 ATAATTTATATGAAA GGTGTCGTCA GTAA TGACGGCACC TTTTTTTATATATGA TERM 446 473468 - 473491 + F 100 -13.2 -5.76633 | opp_overlap 473468 ATAATTTATATGAAA GGTGTCGTCA GTAA TGACGGCACC TTTTTTTATATATGA Swoo_0377 473632 - 473958 + | small multidrug resistance protein Swoo_0378 474684 - 473968 - | short-chain dehydrogenase/reductase SDR Swoo_0379 476374 - 474743 - | hypothetical protein TERM 447 476125 - 476141 + g 76 -8.7 -3.94634 | GACTCACTTGGCTTT GCTCATC GAA GGTGAGC TTATTTAAAATCGTG TERM 448 476838 - 476810 - R 90 -12.5 -2.73681 | opp_overlap 476807 GATTTACTTTAAGCA CTAGCAGTGAGTT TTA AGCTCACTGCCAG AGGTATGCTAGAGAG Swoo_0380 478066 - 476846 - | hypothetical protein TERM 449 478226 - 478210 - H 70 -5.1 -4.57073 | opp_overlap 478210 478217, overlap 478211 CATCTTGGTTAAAAA GCTGTTG TAT CAACAGA TATTAACTATAGACA TERM 450 478225 - 478211 - H 72 -8.6 -3.33922 | opp_overlap 478210 478217, overlap 478210 ATCTTGGTTAAAAAG CTGTTG TAT CAACAG ATATTAACTATAGAC Swoo_0381 478251 - 478652 + | hypothetical protein TERM 451 478849 - 478839 - f 70 -8.2 -3.29144 | opp_overlap 478839 TCACTCTCTTGATAA CGCC GTG GGCG CCGATGTTTCTCCTA TERM 452 480765 - 480755 - g 72 -5.4 -4.58283 | GAACTCTCTTAAAAA TGTG AAG CACA CCAGTGAACAAGTGA Swoo_0382 478899 - 481190 + | radical SAM domain-containing protein TERM 453 481242 - 481206 - f 75 -8.2 -3.84587 | opp_overlap 481213, overlap 481211 481213 ACTAGCTAAATATAA TCAAATAGGGGAATAT TATTG ATATTCCCCTTTTTTA TAGGAGCTTTCGATG TERM 454 481237 - 481211 - f 79 -8.1 -4.11501 | opp_overlap 481213, overlap 481206 481213 CTAAATATAATCAAA TAGGGGAATAT TATTG ATATTCCCCTT TTTTATAGGAGCTTT TERM 455 481213 - 481235 + F 100 -11.4 -5.24531 | opp_overlap 481211 481206 481213 AAATATAATCAAATA GGGGAATATT ATT GATATTCCCC TTTTTTATAGGAGCT TERM 456 481235 - 481213 - f 81 -10.7 -3.63608 | opp_overlap 481213, overlap 481211 481206 AAATATAATCAAATA GGGGAATAT TATTG ATATTCCCC TTTTTTATAGGAGCT TERM 457 481593 - 481566 - g 78 -6.2 -4.72846 | opp_overlap 481566 TGACACAGTGAAAAA CCAGGCAGCA GAAAAGAG CGCAGCCTGG TTCGATTAAGCCTTG Swoo_0383 481255 - 481602 + | hypothetical protein Swoo_0384 482579 - 481638 - | isochorismatase hydrolase Swoo_0385 482709 - 483581 + | LysR family transcriptional regulator Swoo_0386 483654 - 484232 + | hypothetical protein Swoo_0387 485202 - 485612 + | hypothetical protein Swoo_0388 486599 - 485643 - | transposase IS111A/IS1328/IS1533 Swoo_0389 486933 - 487352 + | hypothetical protein Swoo_0390 487479 - 487925 + | hypothetical protein Swoo_0391 488815 - 488468 - | hypothetical protein Swoo_0392 489392 - 488829 - | hypothetical protein TERM 458 489447 - 489464 + r 71 -4 -4.88388 | opp_overlap 489448, overlap 489448 AGCTAAAAACAAAAA AGCGCC TTTTAC GGCGCA TTTTTATAAAGTTGT TERM 459 489463 - 489448 - R 100 -7.5 -5.93252 | opp_overlap 489447 489448 GCTAAAAACAAAAAA GCGCC TTTTAC GGCGC ATTTTTATAAAGTTG Swoo_0393 491572 - 489494 - | peptidase S9 prolyl oligopeptidase Swoo_0394 492855 - 491950 - | hypothetical protein Swoo_0395 493397 - 493014 - | hypothetical protein TERM 460 493334 - 493348 + g 73 -5 -4.70583 | opp_overlap 493295 TGCAATAGATCTGCA CCATAG CGC TTATGG TTTTATATTCGTAGA Swoo_0396 493872 - 494693 + | hypothetical protein TERM 461 494738 - 494719 - f 72 -7.8 -3.85254 | opp_overlap 494719, overlap 494717 TATTAGTATAAAATA GGGCGAAC TTAG GTTCGTCC TTTTTATTGGTTACC TERM 462 494719 - 494738 + F 100 -10 -5.1963 | opp_overlap 494719 494717 TATTAGTATAAAATA GGGCGAAC TTAG GTTCGTCC TTTTTATTGGTTACC TERM 463 494920 - 494950 + G 70 -10.4 -2.66812 | overlap 494920 494917 TCTCAGGCTACTATG GCACCTCAGAGCAG TGC TTGCTCAAAGGTGC TGGTATGGTGAAATT Swoo_0397 494778 - 495077 + | hypothetical protein Swoo_0398 495136 - 495429 + | hypothetical protein Swoo_0399 495426 - 496430 + | aminoglycoside phosphotransferase Swoo_0400 496579 - 497190 + | DSBA oxidoreductase TERM 464 497211 - 497226 + F 100 -10.4 -5.28176 | opp_overlap 497211 AGCGTTAAACATAAA GGAGCC TAAT GGCTCC TTTTTTGTACATGGA TERM 465 497226 - 497211 - f 87 -10.4 -4.33258 | opp_overlap 497211 AGCGTTAAACATAAA GGAGCC TAAT GGCTCC TTTTTTGTACATGGA TERM 466 497673 - 497646 - f 100 -13.6 -6.11019 | opp_overlap 497645, overlap 497671 497672 AAAAAGCAAAAAAAA CCGTATTTCCTG GTCG CAAGAAATACGG CTATTGAGCCATGAG TERM 467 497677 - 497694 + F 75 -7.7 -4.14739 | opp_overlap 497672 497671, overlap 497678 CAAGAAATACGGCTA TTGAGCC ATGA GGCTCAG TTTTACCCTGAGTAA TERM 468 497678 - 497693 + F 70 -9 -3.08522 | opp_overlap 497672 497671, overlap 497677 AAGAAATACGGCTAT TGAGCC ATGA GGCTCA GTTTTACCCTGAGTA TERM 469 498085 - 498068 - g 75 -4.9 -4.83615 | gap 1, opp_overlap 498048, overlap 498069 498070 TACTTCCTAGAAAAA GC-TTACC TGA GGTAAAGC AAGCTGTGATTGAGC Swoo_0401 497935 - 498147 + | hypothetical protein Swoo_0402 498381 - 498178 - | hypothetical protein Swoo_0403 498661 - 499431 + | hypothetical protein TERM 470 499450 - 499463 + T 79 -9.5 -3.73775 | opp_overlap 499450 TCTACCCATAAAAAA GCCCC TAAT GGGGC TTTGCTAACAATCAG TERM 471 499463 - 499450 - T 100 -9.5 -5.28176 | opp_overlap 499450 TCTACCCATAAAAAA GCCCC TAAT GGGGC TTTGCTAACAATCAG Swoo_0404 500055 - 499480 - | hypothetical protein TERM 472 500313 - 500285 - R 91 -12.6 -2.91276 | gap 1, opp_overlap 500292, overlap 500292 TTTTTGCTCATAAAC GCAA-AAAGCCCC TGAC GGGGCTTTGTTGC TAAAAATCAGCTTAG TERM 473 500292 - 500305 + r 85 -9.5 -4.2461 | opp_overlap 500285 500292 TCATAAACGCAAAAA GCCCC TGAC GGGGC TTTGTTGCTAAAAAT TERM 474 500305 - 500292 - R 90 -9.5 -4.84529 | opp_overlap 500292, overlap 500285 TCATAAACGCAAAAA GCCCC TGAC GGGGC TTTGTTGCTAAAAAT Swoo_0405 500951 - 500325 - | hypothetical protein TERM 475 501103 - 501113 + H 72 -5.4 -4.58859 | GTTGGTTTTTGGGGT GATC ACC GATC TTTATTGTTGTATTT Swoo_0406 501352 - 502440 + | branched-chain amino acid aminotransferase TERM 476 502466 - 502442 - T 74 -8.8 -3.55444 | opp_overlap 502459 502464 CGCGCACTGTTTAAA TTTATACCTA TCTTC TAGGTATAAA AAAGGCGCCTATGGC TERM 477 502459 - 502495 + T 91 -7.3 -5.23765 | opp_overlap 502442 502470, overlap 502464 502470 TATACCTATCTTCTA GGTATAAAAAAGGCGCC TAT GGCGCCTTTTTACTATG TTTTTATATTGTTTA TERM 478 502464 - 502490 + T 93 -13.8 -2.78388 | opp_overlap 502442 502470, overlap 502459 502470 CTATCTTCTAGGTAT AAAAAAGGCGCC TAT GGCGCCTTTTTA CTATGTTTTTATATT TERM 479 502470 - 502484 + T 100 -12.8 -4.91573 | opp_overlap 502470, overlap 502464 502459 TCTAGGTATAAAAAA GGCGCC TAT GGCGCC TTTTTACTATGTTTT TERM 480 502484 - 502470 - T 100 -12.8 -5.28176 | opp_overlap 502470 502464 502459 TCTAGGTATAAAAAA GGCGCC TAT GGCGCC TTTTTACTATGTTTT Swoo_0407 502958 - 502518 - | hypothetical protein Swoo_0408 504069 - 503146 - | phospholipid/glycerol acyltransferase TERM 481 503782 - 503812 + g 70 -2.5 -5.01546 | opp_overlap 503776, overlap 503777 GATATCGAAGCCACT TAGGTGGTTACTG ATAAG CAGGTACCAGCTA TTTTTATCTAAATTT Swoo_0409 504982 - 504077 - | phospholipid/glycerol acyltransferase TERM 482 504807 - 504786 - G 70 -7.3 -3.90316 | overlap 504784 ACCGGGTGAAAAATA CGTTCAATG ACAC CATTGATCG AGATCCAAGCGGTTG Swoo_0410 506623 - 505100 - | Mg chelatase, subunit ChlI TERM 483 506817 - 506796 - R 72 -5.9 -4.36914 | gap 1, opp_overlap 506796, overlap 506798 TCCGTTTGGAGAAAA GTCGTAGACG TCT CGTCCAC-AC TTTATGGCCTGACGG TERM 484 506888 - 506872 - R 72 -8 -3.75665 | CCACACCCGACCAAA GAGGAC TACTC GTCCTC ATCCTCCTTGGAACC Swoo_0411 508232 - 507312 - | hypothetical protein TERM 485 507903 - 507918 + g 72 -3.2 -4.91473 | overlap 507905 CAGAACCTTTTTCTC GATTGC AACT GCAACC TTTGTTTTTAAGTTC Swoo_0412 508937 - 508245 - | hypothetical protein TERM 486 510306 - 510325 + G 73 -6.4 -4.3739 | gap 1 CTGCTAAAAGCTGCT GCTCCTAGC ATT GC-AGGGGC TTTTGTAAAAAGGTA Swoo_0414 509886 - 511583 + | KAP P-loop domain-containing protein Swoo_0415 513350 - 511965 - | hypothetical protein Swoo_0416 514168 - 514052 - | Mg chelatase, subunit ChlI Swoo_0417 514392 - 515360 + | BAX protein Swoo_0418 516665 - 515370 - | radical SAM domain-containing protein TERM 487 516164 - 516191 + g 71 -9.2 -3.30243 | opp_overlap 516170 516175 TGGGTTTTCCACTAC GAGTAACACGAT ACAT ATCGTGTAGCTC TTGTGGGCCATCAAT Swoo_0419 518261 - 516720 - | sulfatase Swoo_0420 520087 - 518348 - | hypothetical protein TERM 488 518969 - 518959 - G 72 -6.8 -4.20817 | GACAGTCTAAAATAA TGGC GTC GCCA AAGTCTCGTTGCCAG Swoo_0421 520287 - 521339 + | AraC family transcriptional regulator Swoo_0422 521329 - 521853 + | BAX protein TERM 489 523134 - 523156 + G 75 -8.4 -3.73953 | CGCCGACTTTTATTG CTCGTGGCGG TAA TCGCTATGAG TTTGCTGAGGATAGT Swoo_0423 522059 - 524488 + | hypothetical protein TERM 490 524536 - 524559 + T 100 -8.9 -5.24531 | opp_overlap 524536 GTGTTACAAAGCCAA GCCCTTTAC TCAATC GTAAGGGGC TTTTTTATGGCCGAT Swoo_0424 525372 - 524713 - | glutathione S-transferase domain-containing protein Swoo_0425 525487 - 526332 + | LysR family transcriptional regulator TERM 491 526362 - 526344 - T 78 -7.4 -4.3898 | ATGATGGGTATAAAA GGGCTC TCGATAG GAGCCC AAATGCTGTTATTGT Swoo_0426 527918 - 526371 - | protein-disulfide isomerase-like protein TERM 492 527644 - 527660 + g 71 -4.3 -4.69053 | overlap 527642 ACTTTTGAGGCAACT GCCGTTT CCA ACGCGGC TTTTCTTAACTGATA TERM 493 527974 - 527949 - R 100 -7.5 -5.32699 | opp_overlap 527949 CTAAATATGAAAAAA CCATGGGAACA AGAT TGAACCCATGG TGTACTTATACCAAC Swoo_0427 529976 - 528315 - | peptidase domain-containing protein TERM 494 529502 - 529482 - G 100 -14.1 -3.60098 | AGCTGGGACCTCAAA GGTGAACAG AAG CTGTTCACC ACTACTGCCCGTTAA Swoo_0428 530232 - 531257 + | AraC family transcriptional regulator Swoo_0429 532293 - 531361 - | protoheme IX farnesyltransferase TERM 495 531974 - 531964 - G 72 -6.8 -4.21141 | GGCCAATAAACCAAA GCCT ATT AGGC CCAAAGCTAAACTGA Swoo_0430 532641 - 532306 - | cytochrome o ubiquinol oxidase subunit IV Swoo_0431 533288 - 532641 - | cytochrome o ubiquinol oxidase, subunit III Swoo_0432 535270 - 533285 - | cytochrome o ubiquinol oxidase, subunit I Swoo_0433 536193 - 535273 - | ubiquinol oxidase, subunit II TERM 496 535451 - 535474 + g 74 -7.6 -4.18737 | gap 1, opp_overlap 535450, overlap 535447 CTTGGTTTAGCTAAT GCTTGATA-AC TTT GTCTATCAAGC TTATATTTTTGTTGC Swoo_0434 536761 - 536372 - | hypothetical protein Swoo_0435 537215 - 537751 + | alkylhydroperoxidase Swoo_0436 537833 - 538087 + | hypothetical protein TERM 497 538102 - 538079 - f 71 -8.2 -3.5393 | overlap 538080 538094 ATTATTCCTTTGAAA GTCGCTTAAG GAAA CTTAAGCGAG GGGGGCTTAAATGAT TERM 498 538101 - 538080 - f 81 -11.7 -2.72144 | overlap 538079 538094 TTATTCCTTTGAAAG TCGCTTAAG GAAA CTTAAGCGA GGGGGGCTTAAATGA Swoo_0437 538113 - 538358 + | transcriptional antiterminator, Rof Swoo_0438 538527 - 539327 + | serine O-acetyltransferase Swoo_0439 540148 - 539345 - | diguanylate cyclase TERM 499 539943 - 539913 - G 75 -4.6 -4.91194 | overlap 539914 539930 ATAACAAATACAAAA CCGCCTCCACCACA GAA TATCGTGGCGACGA TAAGCTCAAGAGTGC Swoo_0440 541209 - 540337 - | LysR family transcriptional regulator TERM 500 540561 - 540576 + g 71 -9 -3.34192 | CCTGAGCATAGATGT TTGGGC TAAG GCCCAA TTGCTTAAACCAATT TERM 501 541273 - 541242 - H 72 -9.6 -2.76399 | gap 1, overlap 541241 541244 CTCAATGAAACGAAT GAC-CTGTGTTGCAA TAA TTGCAATACAGTGTC CCGAATATATCATTT TERM 502 541352 - 541327 - H 74 -9.8 -2.79188 | opp_overlap 541326 TAGTGAATTCAATCA CTGCTCAAGC AAGCGG GCTTGAGCAA CTCTCCTAAATTCGA TERM 503 542206 - 542186 - g 80 -8.3 -4.16251 | opp_overlap 542174 ACAGAAGCGCTAAAA CATGGTGGT ATC ACCAACATG ATGGATCGCCTCTCT Swoo_0441 541388 - 542869 + | ketol-acid reductoisomerase TERM 504 542917 - 542884 - f 74 -6.2 -4.59773 | gap 1, overlap 542885 GTTCATTTTCAAAAA GTTAT-AGGCCCAAT ATTTA ATTGGGCCTGATAAT AAAAATACACAAAGA TERM 505 542916 - 542885 - f 78 -9.7 -3.35542 | gap 1, overlap 542884 TTCATTTTCAAAAAG TTAT-AGGCCCAAT ATTTA ATTGGGCCTGATAA TAAAAATACACAAAG TERM 506 543267 - 543292 + F 100 -16.1 -5.0925 | opp_overlap 543255 543257 543267 AAAGATTGCAACCAA CCCCCCGCTCC GAAA GGACCGGGGGG TTTTTCGTTTTAAGG TERM 507 543292 - 543267 - f 100 -16.1 -3.37901 | opp_overlap 543267, overlap 543255 543257 AAAGATTGCAACCAA CCCCCCGCTCC GAAA GGACCGGGGGG TTTTTCGTTTTAAGG Swoo_0442 543383 - 545071 + | acetolactate synthase, large subunit, biosynthetic type Swoo_0443 545129 - 545383 + | amino acid-binding ACT domain-containing protein TERM 508 545766 - 545777 + G 80 -7.2 -4.49981 | AAAAGTGCTTATATC CGCC CGCT GGCG TTTTATGGTGATGTG Swoo_0444 545475 - 546398 + | branched-chain amino acid aminotransferase TERM 509 546480 - 546445 - f 79 -6.2 -4.96427 | gap 1, overlap 546447 TAAGAATAAAACAAA GACGAACGCTTCGCT GACGGAT AGCGGAACGTTCG-C AGGCTCACTGACGGA TERM 510 546479 - 546447 - f 85 -9.9 -4.06214 | overlap 546445 AGAATAAAACAAAGA CGAACGCTTCGCT GACGGAT AGCGGAACGTTCG CAGGCTCACTGACGG Swoo_0445 546946 - 548796 + | dihydroxy-acid dehydratase Swoo_0446 548798 - 550348 + | threonine dehydratase, biosynthetic TERM 511 550380 - 550365 - f 76 -10.4 -2.53908 | opp_overlap 550365, overlap 550364 AAAGTTAGTAGTAAG GGACGC AATC GCGTCC TTTTTTATGTTATCT TERM 512 550365 - 550380 + F 100 -10.4 -5.53436 | opp_overlap 550365 550364 AAAGTTAGTAGTAAG GGACGC AATC GCGTCC TTTTTTATGTTATCT TERM 513 550419 - 550400 - f 70 -8 -3.60627 | TTATGTTATCTTAAA TTTCAAAC GCTA GTTTGAAA AATCGACCGTCGAAG TERM 514 550432 - 550422 - f 72 -5.4 -4.59773 | CGCTAGTTTGAAAAA TCGA CCG TCGA AGGCTTAGTTAGTCT TERM 515 551125 - 551151 + G 75 -8.8 -3.7282 | opp_overlap 551133, overlap 551129 551133 AGAGTTTATGTGCAC TTGCCAAACAAC ATG GTTGTTTGTCGA TTGTTGATGCAGTGA TERM 516 551129 - 551147 + G 70 -10.4 -2.67428 | opp_overlap 551133, overlap 551125 551133 TTTATGTGCACTTGC CAAACAAC ATG GTTGTTTG TCGATTGTTGATGCA Swoo_0447 550632 - 551774 + | Serine--pyruvate transaminase TERM 517 551832 - 551808 - T 100 -15.9 -3.64371 | opp_overlap 551808 AAGCGACACTTCAAA TGCCAGTAAGT TAA ACTTACTGGCA TTTTTTATCTGTTTA TERM 518 551808 - 551832 + T 100 -15.9 -5.51046 | opp_overlap 551808 AAGCGACACTTCAAA TGCCAGTAAGT TAA ACTTACTGGCA TTTTTTATCTGTTTA Swoo_0448 553784 - 551850 - | hypothetical protein TERM 519 553556 - 553566 + g 71 -4 -4.74132 | CAAAATCATTACTTT TAAC ATA GTTA TTTTTGATGAGCTGT TERM 520 553865 - 553837 - R 79 -7.5 -4.2558 | opp_overlap 553835 553838 553842, overlap 553838 TATTTGTTATCAAAA GGAGCCATAGA GATATGT TCTATGGCTCT GAGTTTACTAGTTTT TERM 521 553838 - 553864 + r 81 -11.7 -2.6989 | opp_overlap 553837 553838, overlap 553835 553842 ATTTGTTATCAAAAG GAGCCATAGAG ATATG TTCTATGGCTC TGAGTTTACTAGTTT TERM 522 553864 - 553838 - R 80 -11 -3.15027 | opp_overlap 553838 553835 553842, overlap 553837 ATTTGTTATCAAAAG GAGCCATAGA GATATGT TCTATGGCTC TGAGTTTACTAGTTT Swoo_0449 555064 - 553934 - | Zn-dependent hydrolase of the beta-lactamase fold TERM 523 555115 - 555093 - H 75 -6.4 -4.46514 | opp_overlap 555098 ATTTAGTTAAACAAA GTAAACTATA CGG TGTAGTTTAC TTAAAGTTGTGTAAA TERM 524 555374 - 555361 - g 70 -6.7 -4.0825 | opp_overlap 555369 555371 TTTTCAAGTAAAGAA GCACT GTTT AGTGC AATCATTTTGGAGAT Swoo_0450 555196 - 555801 + | TetR family transcriptional regulator TERM 525 555836 - 555868 + T 100 -14.4 -4.74706 | gap 1, opp_overlap 555836 AGTCTTTATTGAAAA GGTCTGATTAG-CGT AAAA ACGACTAATCAGACC TTTTTAGATATTAAA TERM 526 555868 - 555836 - T 100 -14.4 -4.18197 | gap 1, opp_overlap 555836 AGTCTTTATTGAAAA GGTCTGATTAG-CGT AAAA ACGACTAATCAGACC TTTTTAGATATTAAA Swoo_0451 559374 - 555916 - | hypothetical protein TERM 527 556007 - 555997 - G 78 -5.4 -5.00895 | opp_overlap 555997 CCCATTATAGAAAAA CAGA TGC TCTG CTTTATTTGAGTCAT TERM 528 559660 - 559683 + r 77 -9.6 -3.54408 | overlap 559656 TCTTTAGAGTTTAGA CTCGCTGC CATGTTAA GCAGCGAG TTGATTTAAGTAGGC Swoo_0452 561880 - 559892 - | TonB-dependent copper receptor Swoo_0453 562213 - 562866 + | 2OG-Fe(II) oxygenase Swoo_0454 564229 - 566049 + | AAA ATPase Swoo_0455 566160 - 567080 + | hypothetical protein TERM 529 567097 - 567086 - f 70 -3 -5.12916 | CAGAAAATAAGAAAA CTAA CGTA TTAG GATAGGCAATCGGGT TERM 530 567787 - 567828 + F 79 -10.9 -2.94695 | gap 1, opp_overlap 567800, overlap 567800 567802 TGTTAACATCGCTCT GGAAGCGCTAAAACTCGCCT TTT AGGCGTGTTTTTG-GCTGCC TACTTCTGTGTTGAA TERM 531 567816 - 567800 - f 75 -7.9 -4.14392 | opp_overlap 567787 567800 567802 CTGGAAGCGCTAAAA CTCGCCT TTT AGGCGTG TTTTTGGCTGCCTAC TERM 532 567800 - 567816 + F 83 -7.9 -4.67353 | opp_overlap 567800, overlap 567787 567802 CTGGAAGCGCTAAAA CTCGCCT TTT AGGCGTG TTTTTGGCTGCCTAC TERM 533 567802 - 567814 + F 79 -9.1 -3.95214 | opp_overlap 567800, overlap 567800 567787 GGAAGCGCTAAAACT CGCCT TTT AGGCG TGTTTTTGGCTGCCT TERM 534 568216 - 568229 + G 70 -5.9 -4.30844 | overlap 568220 TTAACCACCCTGCGT GTGCC GATT GGCGC TTTTACTGCTCCGAT Swoo_0456 568008 - 569195 + | peptidase M48 Ste24p Swoo_0457 569224 - 569886 + | hypothetical protein Swoo_0458 569915 - 570598 + | hypothetical protein Swoo_0459 570610 - 571659 + | hypothetical protein TERM 535 571699 - 571722 + T 100 -14 -5.37171 | opp_overlap 571699 CGTAAGCACTAAAAA TGGCCCTATA GAGA TATAGGGCCA TTTTTGTTTGCTATT TERM 536 571722 - 571699 - T 100 -14 -4.81083 | opp_overlap 571699 CGTAAGCACTAAAAA TGGCCCTATA GAGA TATAGGGCCA TTTTTGTTTGCTATT Swoo_0460 573046 - 571736 - | sodium:neurotransmitter symporter TERM 537 573354 - 573322 - R 73 -10 -2.54371 | opp_overlap 573322, overlap 573321 573320 CGTTTGAAATAAATT GTCGAGTTGTAATG TTTTT CATCACAACTCGAG TCTGATTGAGCTTAA Swoo_0461 573851 - 573366 - | AsnC family transcriptional regulator Swoo_0462 574638 - 573865 - | phosphoesterase PA-phosphatase related TERM 538 574892 - 574866 - R 70 -5.9 -4.323 | gap 1, opp_overlap 574866 CGCAAAGAGTGAAAA TCCCCAA-GGCA AAAT TGCGATTGGGGA TCTCATACTGATTGG Swoo_0463 576262 - 574916 - | inner membrane CreD family protein TERM 539 575054 - 575072 + g 73 -4.4 -4.88067 | CAGACTGGTTAGCAT GGTGGCGA TAA TCGCGCCC TTTTTATAACTGGCT TERM 540 576393 - 576408 + r 89 -10.4 -4.3767 | opp_overlap 576393 TCCAAACACAAAAAA GAGCGC CTAA GCGCTC TTTGTTATCATCTCG TERM 541 576408 - 576393 - R 100 -10.4 -5.56264 | opp_overlap 576393 TCCAAACACAAAAAA GAGCGC CTAA GCGCTC TTTGTTATCATCTCG Swoo_0464 576729 - 576463 - | hypothetical protein TERM 542 576519 - 576534 + g 78 -6.2 -4.61527 | GTGCATCTACTTGTG CTTGAA GTGC TTCAAG TTTTTCGCGAGTTTT TERM 543 577182 - 577209 + r 100 -20 -3.76952 | opp_overlap 577182 AATTAGTATCAAAAA GCCCCCACTCAA GAGA TTGAGTGGGGGC TTTAAATTAACTGAA TERM 544 577209 - 577182 - R 100 -20 -4.7871 | opp_overlap 577182 AATTAGTATCAAAAA GCCCCCACTCAA GAGA TTGAGTGGGGGC TTTAAATTAACTGAA Swoo_0465 580310 - 577233 - | acriflavin resistance protein Swoo_0466 581442 - 580324 - | RND family efflux transporter MFP subunit Swoo_0467 582035 - 581439 - | TetR family transcriptional regulator TERM 545 582058 - 582081 + H 70 -7.6 -3.70722 | opp_overlap 582065, overlap 582061 CTTTTAAAACGTTAG TAGTGAATGA ATGT TCATTCATTA TTCTATGTTACTCAG TERM 546 582061 - 582078 + H 72 -7.1 -3.97645 | opp_overlap 582065, overlap 582058 TTAAAACGTTAGTAG TGAATGA ATGT TCATTCA TTATTCTATGTTACT Swoo_0468 582259 - 584271 + | ATP-dependent DNA helicase Rep TERM 547 584282 - 584302 + T 88 -11.2 -4.26634 | opp_overlap 584284, overlap 584274 AGTAATTGTTTATAG GAGTGCTC TTTAT GAGCACTC TTTTGAAGTTGTTTT Swoo_0469 586958 - 584334 - | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 548 584736 - 584715 - G 74 -5.9 -4.65895 | gap 1, opp_overlap 584729 584733 CTGCTCATCGAAAAA TAGCCA-GAG TTG CTCACGGCTA AAATAGCTCTGTTTC TERM 549 587796 - 587818 + H 100 -12.1 -5.46698 | opp_overlap 587796 CCAAATTCTTCGAAA GCCTTCTGA GCAAA TCAGAAGGC TTTTTTCGTTTTACG TERM 550 587818 - 587796 - H 90 -12.1 -3.56594 | opp_overlap 587796 CCAAATTCTTCGAAA GCCTTCTGA GCAAA TCAGAAGGC TTTTTTCGTTTTACG TERM 551 588006 - 588039 + H 100 -13.3 -4.09685 | opp_overlap 588002 588012 588030, overlap 588012 AGCCGACCAAATTAA CTAGAAGCCCTTAGA GAAA TCTAAGGGCTTTTTG TTTTCAGCCCTAAAC TERM 552 588033 - 588012 - H 100 -13.1 -3.58914 | opp_overlap 588006 588012, overlap 588002 588030 CCAAATTAACTAGAA GCCCTTAGA GAAA TCTAAGGGC TTTTTGTTTTCAGCC TERM 553 588012 - 588033 + H 100 -13.1 -5.45802 | opp_overlap 588012 588002 588030, overlap 588006 CCAAATTAACTAGAA GCCCTTAGA GAAA TCTAAGGGC TTTTTGTTTTCAGCC TERM 554 588073 - 588054 - H 90 -12.2 -3.57144 | opp_overlap 588054 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 555 588054 - 588073 + H 90 -12.2 -3.44319 | opp_overlap 588054 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG Swoo_0470 588157 - 588591 + | transposase IS200-family protein TERM 556 588614 - 588596 - T 80 -10.2 -3.60214 | opp_overlap 588608, overlap 588597 ATTTGAAGTAGACAA CGCCCCCT TTT AGGGGGCT AATACAAAGCCACCT TERM 557 588613 - 588597 - T 93 -13.7 -2.75647 | opp_overlap 588608, overlap 588596 TTTGAAGTAGACAAC GCCCCCT TTT AGGGGGC TAATACAAAGCCACC TERM 558 588623 - 588644 + T 79 -8.7 -4.18676 | opp_overlap 588623 588624, overlap 588608 588624 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTTTATAG TERM 559 588644 - 588623 - T 79 -8.7 -4.1891 | opp_overlap 588608 588623 588624, overlap 588624 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTTTATAG TERM 560 588643 - 588624 - T 87 -12.2 -3.11024 | opp_overlap 588608 588624 588623, overlap 588623 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTTTATA TERM 561 588624 - 588643 + T 87 -12.2 -3.10121 | opp_overlap 588623 588624, overlap 588608 588623 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTTTATA TERM 562 588720 - 588753 + T 100 -13.3 -4.48741 | opp_overlap 588716 588726, overlap 588726 AGCCGACCAAATTAA CTAGAAGCCCTTAGA GAAA TCTAAGGGCTTTTTG TTTTATAGTGGATTA TERM 563 588747 - 588726 - T 100 -13.1 -3.58914 | opp_overlap 588720 588726, overlap 588716 CCAAATTAACTAGAA GCCCTTAGA GAAA TCTAAGGGC TTTTTGTTTTATAGT TERM 564 588726 - 588747 + T 100 -13.1 -5.56263 | opp_overlap 588726 588716, overlap 588720 CCAAATTAACTAGAA GCCCTTAGA GAAA TCTAAGGGC TTTTTGTTTTATAGT TERM 565 588951 - 588973 + T 72 -7.7 -3.84901 | opp_overlap 588952, overlap 588947 588952 AGTCGAAAACAAAAA AGCCTAGGT CGTTA ACCTAGGCC TTCCTTTTTGGTGAC TERM 566 588972 - 588952 - T 100 -11.9 -5.79595 | opp_overlap 588951 588947 588952 GTCGAAAACAAAAAA GCCTAGGTC GTT AACCTAGGC CTTCCTTTTTGGTGA TERM 567 588952 - 588972 + T 79 -11.2 -2.90218 | opp_overlap 588952, overlap 588951 588947 GTCGAAAACAAAAAA GCCTAGGT CGTTA ACCTAGGC CTTCCTTTTTGGTGA Swoo_0471 590927 - 589005 - | diguanylate cyclase/phosphodiesterase Swoo_0472 591643 - 590936 - | hypothetical protein Swoo_0473 592267 - 591662 - | OmpA/MotB domain-containing protein Swoo_0474 593679 - 592267 - | TolC family type I secretion outer membrane protein TERM 568 593345 - 593321 - G 82 -10.1 -4.08706 | overlap 593322 593324 593329 CTGCTAGTATAGAAA CCATCAAACAG CAT CTGTTTGATGC TAAAACCAGCTTCGC TERM 569 593344 - 593322 - G 87 -13.6 -3.04902 | overlap 593321 593324 593329 TGCTAGTATAGAAAC CATCAAACAG CAT CTGTTTGATG CTAAAACCAGCTTCG TERM 570 593342 - 593324 - G 73 -10.4 -3.07876 | overlap 593322 593321 593329 CTAGTATAGAAACCA TCAAACAG CAT CTGTTTGA TGCTAAAACCAGCTT Swoo_0475 595092 - 593710 - | HlyD family type I secretion membrane fusion protein Swoo_0476 597265 - 595085 - | type I secretion system ATPase TERM 571 597157 - 597117 - G 70 -7.6 -3.90586 | overlap 597105 ACACTACCGGACAAA GGTAGACC-TGCCGCCATCG ATT CGCTGG-AGCAGGGACTACC GAAGTATTCGGTCAA Swoo_0477 646340 - 597372 - | outer membrane adhesin like proteiin TERM 572 599668 - 599686 + g 78 -6.1 -4.62302 | opp_overlap 599668 599667, overlap 599657 GTACCACCTGATAAT TGATCTT CATCT AAGATCA TTTTTGCAGGTGTTG TERM 573 600498 - 600482 - G 71 -8.7 -3.55071 | opp_overlap 600482 600489 TGATACTTGCCCAAA CGATGAC GTA GTCACCG TCGTCTCCAACGCTG TERM 574 605244 - 605258 + g 73 -10 -3.05844 | GTCTTGGTCGGTGAC GGTGAC AGT GTCACC TATTACGGTGCCCGC TERM 575 607377 - 607331 - G 78 -10.9 -3.16191 | gap 2 TGATATCCTCATCAA TGACCACGG-TC-GGCGCCGCCG GTG CGCCGGTGCCTGAGCCGTAATCA AGCAGCGCATTATCT TERM 576 608117 - 608142 + g 70 -8.9 -3.1637 | CAGTGCCTGTGGCGG GGGCGTCCATG GTGA CAGGGACGCCA TTGGTGAGCATGTCT TERM 577 608433 - 608451 + g 72 -10.2 -2.91912 | GGTGATAACCACCTC CGTGCCCG TCG CGGGTGCG TCTATCGCTAAGTCC TERM 578 609525 - 609545 + g 71 -8.9 -3.30124 | opp_overlap 609525 GTCGGTGACGACTAA GGTGTCGCC GAC GGCGGTGCC TTCTCCGAGCTCAAC TERM 579 610179 - 610193 + g 73 -10 -3.05844 | GTCTTGGTCGGTGAC GGTGAC GGT GTCACC TATTACGGTGCCCGC TERM 580 612312 - 612266 - G 78 -10.9 -3.16191 | gap 2 TGATATCCTCATCAA TGACCACGG-TC-GGCGCCGCCG GTG CGCCGGTGCCTGAGCCGTAATCA AGCAGCGCATTATCT TERM 581 613052 - 613077 + g 70 -8.9 -3.1637 | CAGTGCCTGTGGCGG GGGCGTCCATG GTGA CAGGGACGCCA TTGGTGAGCATGTCT TERM 582 613368 - 613386 + g 72 -10.2 -2.91912 | GGTGATAACCACCTC CGTGCCCG TCG CGGGTGCG TCTATCGCTAAGTCC TERM 583 614460 - 614480 + g 71 -8.9 -3.30124 | opp_overlap 614460 GTCGGTGACGACTAA GGTGTCGCC GAC GGCGGTGCC TTCTCCGAGCTCAAC TERM 584 617247 - 617201 - G 78 -10.9 -3.16191 | gap 2 TGATATCCTCATCAA TGACCACGG-TC-GGCGCCGCCG GTG CGCCGGTGCCTGAGCCGTAATCA AGCAGCGCATTATCT TERM 585 617987 - 618012 + g 70 -8.9 -3.1637 | CAGTGCCTGTGGCGG GGGCGTCCATG GTGA CAGGGACGCCA TTGGTGAGCATGTCT TERM 586 619395 - 619415 + g 71 -8.9 -3.30124 | opp_overlap 619395 GTCGGTGACGACTAA GGTGTCGCC GAC GGCGGTGCC TTCTCCGAGCTCAAC TERM 587 620049 - 620063 + g 73 -10 -3.05844 | GTCTTGGTCGGTGAC GGTGAC GGT GTCACC TATTACGGTGCCCGC TERM 588 622922 - 622947 + g 70 -8.9 -3.1637 | CAGTGCCTGTGGCGG GGGCGTCCATG GTGA CAGGGACGCCA TTGGTGAGCATGTCT TERM 589 623238 - 623256 + g 72 -10.2 -2.91912 | GGTGATAACCACCTC CGTGCCCG TCG CGGGTGCG TCTATCGCTAAGTCC TERM 590 624120 - 624138 + g 76 -10.3 -3.31322 | AGTGATTTCGACTGT TGGTGCC GCGGG GGCACCA TTGTCGAGAATTGCG TERM 591 624324 - 624344 + g 71 -8.9 -3.30124 | opp_overlap 624324 GTCGGTGACGACTAA GGTGTCGCC GAC GGCGGTGCC TTCTCCGAGCTCAAC TERM 592 627851 - 627876 + g 70 -8.9 -3.1637 | CAGTGCCTGTGGCGG GGGCGTCCATG GTGA CAGGGACGCCA TTGGTGAGCATGTCT TERM 593 629259 - 629279 + g 71 -8.9 -3.30124 | opp_overlap 629259 GTCGGTGACGACTAA GGTGTCGCC GAC GGCGGTGCC TTCTCCGAGCTCAAC TERM 594 629913 - 629927 + g 73 -10 -3.05844 | GTCTTGGTCGGTGAC GGTGAC AGT GTCACC TATTACGGTGCCCGC TERM 595 632786 - 632811 + g 70 -8.9 -3.1637 | CAGTGCCTGTGGCGG GGGCGTCCATG GTGA CAGGGACGCCA TTGGTGAGCATGTCT TERM 596 633096 - 633114 + g 72 -10.2 -2.91912 | GGTGATAACCACCTC CGTGCCCG TCG CGGGTGCG TCTATCGCTAAGTCC TERM 597 634842 - 634856 + g 73 -10 -3.05844 | GTCTTGGTCGGTGAC GGTGAC GGT GTCACC TATTACGGTGCCCGC TERM 598 637715 - 637740 + g 70 -8.9 -3.1637 | CAGTGCCTGTGGCGG GGGCGTCCATG GTGA CAGGGACGCCA TTGGTGAGCATGTCT TERM 599 638031 - 638049 + g 72 -10.2 -2.91912 | GGTGATAACCACCTC CGTGCCCG TCG CGGGTGCG TCTATCGCTAAGTCC TERM 600 642550 - 642530 - G 83 -11.2 -3.31144 | CGGTGATCTCTACAA CTGGTGCT TCTGG AGCACCAG TGCCAGTACCGTAAT TERM 601 644971 - 644993 + g 71 -9.8 -3.12353 | opp_overlap 644954, overlap 644956 644954 644953 644951 644969 TCAACCGTGATGGTT GGTGGTGTTG TAT CTACGCCACC TGTATCTGTTGCTGT TERM 602 646651 - 646624 - R 91 -12.9 -3.01712 | opp_overlap 646624 646625 GCTCGGGTGTGAAGA CCTCTTACCAA GAGATT TTGGTAAGAGG CCTAAAAAAGATAAA TERM 603 646691 - 646675 - R 84 -2.3 -5.71295 | opp_overlap 646677, overlap 646677 AGATAAAAACAAAAA TACTTAT AGA ATAAGTT TGTTATTTATTTTAT TERM 604 646677 - 646689 + r 72 -4.9 -4.73617 | opp_overlap 646677 646675 ATAAAAACAAAAATA CTTAT AGA ATAAG TTTGTTATTTATTTT Swoo_0478 656497 - 646718 - | outer membrane adhesin like proteiin TERM 605 647879 - 647899 + g 74 -9.7 -3.35798 | GACTCCTGAATTGTT CTGCTCTGC ATA GGAGAGCAG TTGTGAGTAAACAGT TERM 606 647929 - 647946 + g 72 -9.9 -3.17212 | opp_overlap 647921, overlap 647924 647922 TAAGTAACTGCTGCT CAGCAGT ATTA ACTGCTG TTGATCCCATACTAC TERM 607 654423 - 654411 - G 74 -6.9 -4.3586 | GTATCGATAGTAAAA GCACC AAA GGCGC CAGAGGTATTACCGC TERM 608 655621 - 655637 + g 70 -6.6 -4.09685 | GCGATGTATCTTCAT CGATCT CTTCA AGATCG TTTTGCCCACTAGGA TERM 609 656178 - 656196 + g 72 -8.1 -3.89614 | AAGCCTCCCTCATTA CCACTGC CGCCA GCGGTGG TTTCTGGGAGTTCAA TERM 610 656497 - 656519 + g 72 -3.5 -4.96848 | opp_overlap 656497 TCACGTATAACATCA TTTGATTAC TCCCT GTAAGCAAA TTTTTATCTCACAAA TERM 611 656790 - 656775 - R 90 -6.8 -5.63517 | opp_overlap 656770 656775 TTTGCAAATAAAAAA GTGGAC CTTT GCCCAC TTTTATTGACTAGAG Swoo_0479 666510 - 656821 - | outer membrane adhesin like proteiin TERM 612 661637 - 661611 - G 71 -9.5 -2.98823 | opp_overlap 661616 CTTGTTCTATAGAGA TCACAGGATCA TCATT TGTTCCTGTGA TGGTAATGGTAATCT TERM 613 662744 - 662720 - G 84 -13 -2.55544 | overlap 662716 CTATCACTTAAGTTA GGCTCACTAA TATCT TTAGTGAGCC CGCCAGTATCATCAA TERM 614 663246 - 663256 + g 70 -6.8 -4.03167 | CTTCAGCTAAATTGT CAGC GGC GCTG TTATTTAAATTATAC TERM 615 664803 - 664819 + g 74 -10.9 -2.54192 | overlap 664797 664802 664796 TGTCACTGGCAGTGA GCAAACC ACT GGTTTGC GTTACTCCTGCTGTG TERM 616 666773 - 666737 - R 91 -13.4 -2.60802 | opp_overlap 666743, overlap 666740 666743 666748 AAATAGAGTAAGTCA TAATAAGAAAACTAGC TTGAT ACTAGTTTTCTTATTA AAAATGGATATAAAA TERM 617 666770 - 666740 - R 81 -10.7 -3.4439 | opp_overlap 666743, overlap 666737 666743 666748 TAGAGTAAGTCATAA TAAGAAAACTAGC TTGAT ACTAGTTTTCTTA TTAAAAATGGATATA TERM 618 666767 - 666743 - R 72 -8 -3.85209 | opp_overlap 666743, overlap 666740 666737 666748 AGTAAGTCATAATAA GAAAACTAGC TTGAT ACTAGTTTTC TTATTAAAAATGGAT Swoo_0480 667959 - 666790 - | HemY domain-containing protein Swoo_0481 669107 - 667956 - | protein of unknown function DUF513 hemX Swoo_0482 669895 - 669164 - | uroporphyrinogen III synthase HEM4 Swoo_0483 670834 - 669905 - | porphobilinogen deaminase TERM 619 672126 - 672111 - g 72 -3.2 -4.91712 | TTTAAGTGAGAAAAA CCAAGC TAAA GATTGG CGCTATCACAAGCTG Swoo_0484 671140 - 673563 + | putative adenylate cyclase TERM 620 673566 - 673583 + T 100 -9.9 -5.63517 | opp_overlap 673566 TTTTGAGTTTTAAAA GAGGCTT ACTG AAGCCTC TTTTTTCTTTCAGCA TERM 621 673583 - 673566 - T 85 -9.9 -4.11216 | opp_overlap 673566 TTTTGAGTTTTAAAA GAGGCTT ACTG AAGCCTC TTTTTTCTTTCAGCA Swoo_0485 673929 - 673600 - | iron donor protein CyaY TERM 622 675592 - 675582 - g 72 -5.4 -4.5442 | TCGCCAACGAGAAAA GTTG TCA CAAC TCTGGCAAGGTGAGC Swoo_0486 674377 - 675621 + | diaminopimelate decarboxylase TERM 623 676225 - 676240 + G 70 -6.8 -4.07885 | overlap 676237 GAACATGCTGAAGTC GAGCGC ATCG GTGCTC TTTTAACCCAAAATG Swoo_0487 675694 - 676533 + | diaminopimelate epimerase Swoo_0488 676530 - 677168 + | hypothetical protein TERM 624 677412 - 677422 + G 72 -5.4 -4.52803 | CGCTTACCCTTTCGG CTGT TAA ACAG TTTTGTGAGTTTCTA TERM 625 677639 - 677659 + G 86 -9.9 -4.39426 | GCGGAGTTGGCGGCT TTGAATATC TCA GATATTCAA TTTTCTGAGCGTCTG TERM 626 677897 - 677878 - g 72 -8.6 -3.61764 | opp_overlap 677880 GGAGCAAGCTTTAAA TATGCGAG TGCA CCCGCATA AGTTAAGACACTCTT Swoo_0489 677189 - 678088 + | tyrosine recombinase XerC Swoo_0490 678085 - 678804 + | HAD family hydrolase TERM 627 678853 - 678824 - T 93 -10.9 -4.95487 | opp_overlap 678829, overlap 678829 AAAAGAAACAGAAAA GAAAATGGCCTAT AGAG ATAGGCCATTTTT TAAGTGAAGCTTAGT TERM 628 678829 - 678848 + T 93 -10.8 -5.08824 | opp_overlap 678824 678829 AAACAGAAAAGAAAA TGGCCTAT AGAG ATAGGCCA TTTTTTAAGTGAAGC TERM 629 678848 - 678829 - T 100 -10.8 -5.2894 | opp_overlap 678829, overlap 678824 AAACAGAAAAGAAAA TGGCCTAT AGAG ATAGGCCA TTTTTTAAGTGAAGC Swoo_0491 700320 - 678871 - | outer membrane adhesin like proteiin TERM 630 680967 - 680940 - G 75 -8.4 -3.82202 | opp_overlap 680966 CATCGGCAAAGATAA GGCGCTCAACTT CATA AAGGTGATCGCC TGCATCTAGGTCTGC TERM 631 682530 - 682546 + g 70 -10.1 -2.58663 | overlap 682529 TGAACTCTATCTGTT CAGCGGT TGC GCCGCTG GTTCTAGGAGTACCT TERM 632 683936 - 683958 + g 73 -9.2 -3.44146 | opp_overlap 683924 683929 GCACCAGAGGCATCT CTTGCCGTTA AGG TAACAGCAAG TTCATTATCAGCAGG TERM 633 694104 - 694159 + g 74 -10 -3.18264 | overlap 694095 CCGCAACTGGTGCGC CGGT-GCTGTCGGTGACCAC-GACCGTG ACAT CACCGTCAGTGG-CATCGA-AGCTACCG TTGATGACTGCGCCC TERM 634 694558 - 694578 + g 74 -9.7 -3.39717 | overlap 694571 TTGAGTGATGCTGGT GATGGCCAC TGT GTGACCATC TTCGTCTTGGTCAAT TERM 635 695866 - 695886 + g 100 -15.5 -3.39717 | TTGAGTGATGCTGGT GATGGCCAC TGT GTGGCCATC TTCGTCTTGGTCAAT TERM 636 700750 - 700733 - R 91 -9.1 -4.87665 | opp_overlap 700733 700732 700735 GTTTAGCTATAAAAA GACCGGC CATG GCCGATC CTATATTCTGCATTA Swoo_0492 701494 - 700778 - | hypothetical protein Swoo_0493 702730 - 701600 - | kelch repeat-containing protein TERM 637 701993 - 702004 + g 77 -3.6 -5.2853 | CCAGTCAATTTTTAG GTGG TTAT CCGC TTTTATTTTTCCATA TERM 638 702876 - 702905 + H 79 -8.7 -4.13732 | overlap 702880 ACATTACAAACCTCT CTAATGTTGCTAC TATA GTAGCAATATTTG TCTTTTTATGATTTG TERM 639 702880 - 702901 + H 86 -8.1 -4.60808 | overlap 702876 TACAAACCTCTCTAA TGTTGCTAC TATA GTAGCAATA TTTGTCTTTTTATGA Swoo_0494 702949 - 703224 + | helix-turn-helix domain-containing protein Swoo_0495 703217 - 704452 + | HipA domain-containing protein TERM 640 704517 - 704468 - f 83 -11.7 -3.05844 | opp_overlap 704477 704494 704495 CTTTGGACCGCAACA CTTTTACGCGCATTAAAATGCAA TTTT TCACACTTTTACGCGCATAAAAG TGTGGCTTTGTAGTT TERM 641 704594 - 704615 + F 79 -8.1 -4.1721 | overlap 704552 ATTTAACGGTTGTAG CAGGTAAAG TAGG TTTTACCTG TTTTAGCGTGTAAAT Swoo_0496 704693 - 705004 + | XRE family transcriptional regulator Swoo_0497 705004 - 706320 + | HipA domain-containing protein Swoo_0499 709369 - 706778 - | hypothetical protein Swoo_0500 711510 - 709372 - | hypothetical protein TERM 642 709728 - 709705 - G 100 -12.6 -5.04385 | overlap 709726 TAGAGGGCTAAAAAA CTCTTTGTTG AGTT CAACAAAGAG CTGGCAAAACTCATC Swoo_0501 713352 - 711514 - | restriction modification system DNA specificity subunit TERM 643 712137 - 712150 + g 79 -3.8 -5.17786 | CATCGGTGATGGCTG GCAG TGGTTT CTGC TTTTTGATTTTCTTG Swoo_0502 714833 - 713352 - | N-6 DNA methylase TERM 644 714885 - 714856 - R 100 -14.5 -4.19238 | TCTTTAATTTGAAAA CAGGCTCGATTAA ATGA TTAATCAAGCCTG TGAAATAACGGTTTT Swoo_0503 717401 - 714927 - | EcoEI R domain-containing protein TERM 645 717560 - 717585 + r 100 -17.7 -3.67611 | opp_overlap 717560 GAGGGCATAACAAAA CGGGCTTTCCA TTGC TGGAAAGCCCG TTCTCTTACAATCAC TERM 646 717585 - 717560 - R 100 -17.7 -4.78237 | opp_overlap 717560 GAGGGCATAACAAAA CGGGCTTTCCA TTGC TGGAAAGCCCG TTCTCTTACAATCAC Swoo_0504 717920 - 717615 - | Fis family transcriptional regulator Swoo_0505 718907 - 717939 - | NifR3 family TIM-barrel protein TERM 647 718086 - 718113 + g 85 -7.9 -4.66953 | AGCGAAACGGATCCC CTTATATTCAC CGTAAA GTGAGTATAAG TTTTTAAGGTGTTCC TERM 648 718934 - 718949 + r 71 -4 -5.0133 | gap 1, overlap 718922 CTAGAGCTTCAAAGG GGCGCTA TAG TA-CGCC TTTTTTGAGCCAGTG TERM 649 719023 - 719056 + r 79 -8.9 -4.011 | gap 1 TTTGCAAGGCGCGAA CTCT-GTGGTAGCACG CGG TGTGCTACCGCTAGCG TTATTTACGTATTCC Swoo_0506 719938 - 719057 - | ribosomal protein L11 methyltransferase TERM 650 720430 - 720451 + G 83 -7.3 -4.86001 | opp_overlap 720430 TGCATTTTGAATCGA GCATCTTAC TCGG GAAAGATGC TTTTTATCAGGTGGT Swoo_0507 720288 - 721013 + | fumarate reductase respiratory complex transmembrane subunit Swoo_0508 721209 - 721922 + | fumarate reductase respiratory complex transmembrane subunit TERM 651 721936 - 721974 + F 70 -6 -4.28254 | overlap 721935 AAAAAATTACAGGTT CTAGGTTCTAGGTTCTAG GTT CTAGGTTCTAGGTTCTAG TTTTCGATATTCGAG TERM 652 723342 - 723360 + G 75 -5.3 -4.82901 | TTGGCGGGATGATTA TCGGTAA ATATG TTGCCGA TTTTTGTCAGGAAAA Swoo_0509 722081 - 724105 + | succinate dehydrogenase or fumarate reductase, flavoprotein subunit Swoo_0510 724102 - 724833 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 653 724848 - 724874 + F 100 -6.6 -5.68438 | opp_overlap 724852, overlap 724852 ATACCAACCTATTCC CAAAGCCTGC TTTAATC GCAGGCTTTC TTTTTTCTTTAATCC TERM 654 724852 - 724870 + F 91 -7.4 -5.26158 | opp_overlap 724852, overlap 724848 CAACCTATTCCCAAA GCCTGC TTTAATC GCAGGC TTTCTTTTTTCTTTA Swoo_0511 724931 - 725836 + | LysR family transcriptional regulator TERM 655 725845 - 725873 + T 77 -10.4 -2.96695 | opp_overlap 725851, overlap 725851 TGGTTGATAAAAATT AAAAAAGCCGCA ATATC TGCGGCTTTTTA TGCTTTCCTAGAACC TERM 656 725867 - 725851 - T 100 -10.1 -5.56112 | opp_overlap 725845 725851 ATAAAAATTAAAAAA GCCGCAA TAT CTGCGGC TTTTTATGCTTTCCT TERM 657 725851 - 725867 + T 91 -9.4 -5.05228 | opp_overlap 725851, overlap 725845 ATAAAAATTAAAAAA GCCGCA ATATC TGCGGC TTTTTATGCTTTCCT Swoo_0512 727198 - 725933 - | transcription termination factor Rho TERM 658 727350 - 727386 + r 71 -9.5 -2.64274 | opp_overlap 727342 727352, overlap 727346 CTAGAAATTTAGCTA AACCCGACACAATTTAT TGC ATAACTTGTGTCGGGAG TCACTTTAGACCGCT TERM 659 727384 - 727352 - R 100 -16.5 -3.70478 | opp_overlap 727350 727346, overlap 727342 AGAAATTTAGCTAAA CCCGACACAATTTAT TGC ATAACTTGTGTCGGG AGTCACTTTAGACCG TERM 660 727392 - 727424 + r 81 -10.7 -3.41126 | opp_overlap 727342 GTGTCGGGAGTCACT TTAGACCGCTTAATC GAT GATTAAGCGGTAAAA TTGTGGGATTTATAG Swoo_0513 727760 - 727434 - | thioredoxin Swoo_0514 727936 - 729261 + | DEAD/DEAH box helicase domain-containing protein Swoo_0515 729274 - 730209 + | Ppx/GppA phosphatase TERM 661 731295 - 731283 - g 74 -3.4 -5.10029 | opp_overlap 731283 ATGAATCGCAAAAAA TCCT GCAAA AGGA TCGTTGGTACACTCA Swoo_0516 730631 - 733360 + | TonB-dependent receptor TERM 662 733399 - 733383 - T 95 -12.3 -4.323 | opp_overlap 733383 GCTAAATATGTAAAA GGCACTC AAT GAGTGCC TTTTTTGTTTTCAAC TERM 663 733383 - 733399 + T 100 -12.3 -5.79595 | opp_overlap 733383 GCTAAATATGTAAAA GGCACTC AAT GAGTGCC TTTTTTGTTTTCAAC Swoo_0517 733964 - 733428 - | hypothetical protein TERM 664 734213 - 734197 - R 90 -9.4 -4.84527 | TTTACACAGTAAAAA GCCGCA ATAAA TGCGGC TAAATCATATGGTTG Swoo_0518 735254 - 734238 - | porphobilinogen synthase Swoo_0519 737200 - 735305 - | diguanylate cyclase Swoo_0520 737997 - 737209 - | TatD-related deoxyribonuclease Swoo_0521 738482 - 737997 - | hypothetical protein TERM 665 738556 - 738568 + r 76 -4.8 -5.15167 | ACTTAGCTTCTTGGC CAGG TTCAT CCTG TTTTTCTTGCTCGTC Swoo_0522 739309 - 738539 - | Sec-independent protein translocase, TatC subunit TERM 666 738980 - 738965 - G 71 -9 -3.37354 | opp_overlap 738973 TATACCTAGGTAGAA CAGCAG TGTA CTGCTG GCAAGCAGCGGCATC Swoo_0523 739711 - 739313 - | twin-arginine translocation protein, TatB subunit Swoo_0524 739969 - 739718 - | twin arginine-targeting protein translocase Swoo_0525 741680 - 740031 - | 2-polyprenylphenol 6-hydroxylase Swoo_0526 742300 - 741677 - | sterol-binding domain-containing protein TERM 667 742156 - 742170 + g 83 -11.4 -3.37344 | opp_overlap 742155 ATATAAGGTAGATAG GCCAGC TAA GCTGGC TTAATTGGATACAGA Swoo_0527 743067 - 742312 - | ubiquinone/menaquinone biosynthesis methyltransferase Swoo_0528 744385 - 743351 - | arginase/agmatinase/formiminoglutamase TERM 668 743528 - 743550 + g 83 -12 -3.17688 | ATAGTGTAGCGCGTC CAGTAGTGGG ATC CCCGCTGCTG TTGATGCACTGCTTG TERM 669 744946 - 744930 - g 75 -5.1 -4.82855 | TATGAAACCGAAAAA GAGGG AGCTAAA CCCTC AGTTTCAAAATGGCA Swoo_0529 744541 - 746445 + | peptidase S9 prolyl oligopeptidase TERM 670 746529 - 746492 - T 74 -10.1 -2.80511 | opp_overlap 746502, overlap 746502 TTGATAATGTAATCA GATTAAAAAAGGACGAA TAGT TTCGTCCTTTTTTATTT TTAGAGTGTGACTAT TERM 671 746502 - 746519 + T 100 -9.9 -5.93252 | opp_overlap 746502 746492 AATCAGATTAAAAAA GGACGAA TAGT TTCGTCC TTTTTTATTTTTAGA TERM 672 746519 - 746502 - T 100 -9.9 -5.2422 | opp_overlap 746502, overlap 746492 AATCAGATTAAAAAA GGACGAA TAGT TTCGTCC TTTTTTATTTTTAGA Swoo_0530 747036 - 746551 - | regulator of ribonuclease activity A Swoo_0531 747362 - 747610 + | hypothetical protein TERM 673 747680 - 747713 + F 79 -5.2 -5.19879 | AACGGCACCTTCTTA GGCTCTGAATCAGC ATACTG GCTGGTAAGGAGCC TTTTTATGTTTACAA Swoo_0532 747719 - 748282 + | phosphoesterase PA-phosphatase related TERM 674 748958 - 748980 + G 70 -6.3 -4.26076 | opp_overlap 748957 CCTCTGCTCAGAACC CCAGAACAT ATTAA ATGGTCTGG TTTTAATCGAGATGA Swoo_0533 748307 - 749359 + | hypothetical protein TERM 675 749365 - 749353 - f 76 -4.8 -5.06414 | TTGGCGTAAGAAAAA CCCA TAATT TGGG GGACTTTTGTTGAGT TERM 676 749402 - 749433 + F 85 -10.2 -4.1523 | overlap 749407 TGGCTCTCTAATGGT TGTTTTCAGCCTTC GAAT GAAGGCTGATTACA TTTCTATGTGCTAAC TERM 677 749407 - 749428 + F 100 -13.1 -3.36766 | overlap 749402 CTCTAATGGTTGTTT TCAGCCTTC GAAT GAAGGCTGA TTACATTTCTATGTG TERM 678 749480 - 749496 + F 75 -9.5 -3.35465 | overlap 749489 ATTGGGTTAGGTTGT TGAAGGT CAT ACCTTCA TTGGTATCTATCGCT TERM 679 750235 - 750210 - g 71 -4.8 -4.4959 | TTGAATGAAGTAAAA GATGCCAAAA GCAACA TTTTGGAATC GGTGACACTAGAAGA Swoo_0535 750129 - 751049 + | hypothetical protein TERM 680 751299 - 751280 - g 79 -2.8 -5.32599 | overlap 751281 GAGAAAATAGAAAAA CTGAGCAT ATTA AAGCTCAA GTAAATAACCTATAT Swoo_0536 751174 - 751755 + | hypothetical protein TERM 681 751778 - 751826 + F 72 -9 -3.26948 | opp_overlap 751775, overlap 751779 AGCTAACAAATATGG ATAGGCTTGTTCAACACTTG TCCTTATCC CGAGTGTTGAACAAGCCCGA TTGATACCTTTATAT TERM 682 751779 - 751825 + F 89 -12.5 -2.55446 | opp_overlap 751775, overlap 751778 GCTAACAAATATGGA TAGGCTTGTTCAACACTTG TCCTTATCC CGAGTGTTGAACAAGCCCG ATTGATACCTTTATA TERM 683 752077 - 752056 - f 70 -8.1 -3.22388 | overlap 752048 GACTCAATGCACTAA CGCATTTCT GTCC AAAAATGCG CTATAACCAATAAGT TERM 684 752495 - 752511 + F 77 -6.6 -4.52857 | opp_overlap 752497, overlap 752487 TACACTACATCTACA TAGGTG TTAAT CACCTA TTTTATATGCGGGAT TERM 685 753156 - 753181 + G 70 -7.5 -3.99324 | overlap 753160 AGAGCTGACTGACTT TGATCCAAGGC AGAG GCCTTGGTACA TTTATGCTGGTAGGG TERM 686 753160 - 753177 + G 77 -11.3 -2.7242 | overlap 753156 CTGACTGACTTTGAT CCAAGGC AGAG GCCTTGG TACATTTATGCTGGT TERM 687 755539 - 755523 - g 86 -10.9 -3.89524 | AGGGTACCCTAGAAA GCTCATC GGC GATGAGC TCTCAGTCCCTGAGC Swoo_0537 752620 - 755790 + | metal dependent phosphohydrolase TERM 688 757507 - 757517 + G 100 -4 -5.64006 | GAGCTTAGGTTCCAT GATA GCT TATC TTTTTTTCCTTACAT Swoo_0538 756103 - 759270 + | metal dependent phosphohydrolase TERM 689 759826 - 759844 + G 72 -3.1 -4.92314 | overlap 759832 TTTATGCCATCTACA TCGGCAT GCCCA ATGGCGA TTTTTATGAGTTAAT TERM 690 760377 - 760351 - g 77 -6.6 -4.51743 | opp_overlap 760351 760359 TGAGCAGTAAACAAA GAGATCTAGTTG CAG CAACTCAACCTC TTTTAGTCTCCAATG TERM 691 760758 - 760745 - g 82 -5.3 -5.31275 | GGTTATTAGAAAAAA CTATC CCCA GATAG AGATTATTGAGATGG TERM 692 761407 - 761393 - g 83 -2.8 -5.5208 | TGAGAAGATAAAAAA TCGTCA GTA TGATGA AGTGCGCAATGTCGA Swoo_0539 759489 - 762710 + | putative metal dependent phosphohydrolase TERM 693 762794 - 762812 + G 93 -11.8 -3.94877 | ATCAAAAAGTTTACT GCTTGTAC TAA GTACAAGC TTATTATTGAGCGCT TERM 694 763199 - 763223 + G 80 -10.1 -3.80573 | opp_overlap 763201 GCCTACAACCTTTAA TATTGCCCTGT GGG ATAGGGCGATA TTTCATGATGGTCGA Swoo_0540 762774 - 764273 + | di-haem cytochrome c peroxidase TERM 695 764348 - 764327 - f 74 -8.7 -3.6579 | opp_overlap 764327 AAGTGATCGCAATAA GACAGGGGA GCTA TCTCCTGTC TTTAGATTCAGTAAG TERM 696 764327 - 764348 + F 84 -10.9 -3.76952 | opp_overlap 764327 AAGTGATCGCAATAA GACAGGGGA GCTA TCTCCTGTC TTTAGATTCAGTAAG TERM 697 764768 - 764754 - g 72 -5.6 -4.52589 | overlap 764758 TTGGCCTATATAAAA CCGACG GTG CTTCGG CACAGGAGCAGCCCT TERM 698 764889 - 764912 + G 70 -5.4 -4.30719 | gap 1, opp_overlap 764893, overlap 764891 764893 GGTTATTATTGGAAC TAGA-GCTTCA CAA TGAAGCATCTG TTTATTATGGCCAAG TERM 699 765087 - 765070 - g 71 -8.5 -3.50393 | CGCCAGCGCAGACAA GTTTCAG TTAG CTGAAAC AGAGGTACCTGTTGA Swoo_0541 764513 - 765679 + | hypothetical protein Swoo_0542 765682 - 766443 + | hypothetical protein Swoo_0543 767062 - 768462 + | endonuclease I TERM 700 768513 - 768485 - T 70 -7.4 -3.83155 | opp_overlap 768485 TATTAATATCAATAA GGTAACCTCGCT TTGGC AGAGGGGTTACC TTTAAAGAGGGCTCA TERM 701 768485 - 768513 + T 77 -9.6 -3.53444 | opp_overlap 768485 TATTAATATCAATAA GGTAACCTCGCT TTGGC AGAGGGGTTACC TTTAAAGAGGGCTCA Swoo_0544 769989 - 768631 - | acetyl-CoA carboxylase, biotin carboxylase TERM 702 769589 - 769602 + g 74 -2.3 -5.27477 | TCAGAGCCCGGTACT GTCGG CACG CCCAC TTTTTTCATTGCGCT Swoo_0545 770518 - 770054 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein Swoo_0546 771027 - 770578 - | 3-dehydroquinate dehydratase, type II TERM 703 770892 - 770906 + g 72 -7.1 -4.09348 | opp_overlap 770891, overlap 770891 GCTCAAGTTCAACAT CGGCA CTGTT TGCCG TATTTTTCATATTTT TERM 704 771166 - 771145 - H 85 -9.5 -4.25104 | gap 1, opp_overlap 771147 771162 CTTTTTCGACGAAAA TAGCAGGAGC TTC GC-CCTGCTA TAATGGCACTTCGTG TERM 705 772067 - 772035 - H 72 -7.7 -3.74542 | overlap 772036 GATAATATTTAATAA TGCAGCACTGATAAC AAT GTTATCGCTGCTGCT AATCAATAAGCTGTT TERM 706 772066 - 772036 - H 78 -11.2 -2.84002 | overlap 772035 ATAATATTTAATAAT GCAGCACTGATAAC AAT GTTATCGCTGCTGC TAATCAATAAGCTGT TERM 707 772631 - 772621 - g 87 -5.4 -5.42259 | CTATTTCTAAAAAAA CAAC GTT GTTG GTAACTGGTTTAAGA Swoo_0547 772107 - 772736 + | BRCT domain-containing protein Swoo_0548 773614 - 773183 - | MarR family transcriptional regulator Swoo_0549 773914 - 773624 - | antibiotic biosynthesis monooxygenase TERM 708 773920 - 773975 + r 83 -10.9 -3.53224 | opp_overlap 773937 773966, overlap 773921 773937 GCTCATTCATTATGT TCTCCTTTACCTTTAAATATAGTTA CCATGA TAACTATATTTAAAGGTAAAGCAAC TTTGCAAAACAGATA TERM 709 773921 - 773974 + r 95 -14.4 -2.71791 | opp_overlap 773937 773966, overlap 773920 773937 CTCATTCATTATGTT CTCCTTTACCTTTAAATATAGTTA CCATGA TAACTATATTTAAAGGTAAAGCAA CTTTGCAAAACAGAT TERM 710 774043 - 774065 + r 71 -3.5 -5.08824 | gap 1, opp_overlap 774047, overlap 774044 774047 774059 TAACTTCCATCGTCA TC-AAGAAGG GTTA CCTTCTTAGG TTTTTTAACTAAGAC Swoo_0550 774868 - 774455 - | class I peptide chain release factor Swoo_0551 774986 - 775351 + | hypothetical protein TERM 711 775481 - 775455 - f 79 -6.7 -4.79352 | TCATTTATAAGAAAA GTTATTCGC TAAGGAAAT GCGAATAAC ACCAATACTTAAGGA Swoo_0552 775503 - 775703 + | hypothetical protein Swoo_0553 775871 - 776344 + | hypothetical protein TERM 712 777221 - 777237 + G 74 -8 -4.12599 | GTGTTGATGTTATTA GGCAGT AGCGA ACTGCC TTTTAACGGCTTCTT Swoo_0554 776525 - 777874 + | outer membrane efflux family protein, putative TERM 713 778947 - 778966 + G 78 -6.4 -4.66537 | GCTGAGCTTTACCTG CCTGATTC TATC GAAACAGG TTTTGTGTTGCCCGA Swoo_0555 777891 - 779192 + | RND family efflux transporter MFP subunit TERM 714 780985 - 780971 - g 85 -10 -4.24002 | opp_overlap 780978 TGGCAAAGCCTAAAA CGGTGA TCG TCACCG CCGTGGTGATGTTTG Swoo_0556 779260 - 782490 + | CzcA family heavy metal efflux protein TERM 715 782505 - 782538 + F 70 -2.6 -5.1361 | gap 1 GTCTTTAGCTACGAG TTACGGGTTAAAAGT GACAA GCTTTT-ACTCGTGA TTTTTTAGGCTTTGT TERM 716 782661 - 782679 + F 100 -14.6 -4.23213 | GGGGGGATTTAGTAC GCGCAGCA GGA TGCTGCGC TTTATTAGCTGTGAG Swoo_0557 783046 - 785370 + | peptidase M4 thermolysin TERM 717 785403 - 785424 + T 100 -14.5 -5.07486 | opp_overlap 785403 CTAAGCAACTGAAAA GGCCATCGA ACTC TCGATGGCC TTTTTGTTAGCGCTC TERM 718 785424 - 785403 - T 100 -14.5 -4.32201 | opp_overlap 785403 CTAAGCAACTGAAAA GGCCATCGA ACTC TCGATGGCC TTTTTGTTAGCGCTC Swoo_0558 785695 - 785444 - | hypothetical protein Swoo_0559 788116 - 785795 - | methyl-accepting chemotaxis sensory transducer TERM 719 786027 - 786037 + g 70 -6.8 -4.15143 | GTGATCTCCTCCAGA GCTG CTC CAGC TTTCTCTGCTTGCTT TERM 720 789092 - 789072 - g 74 -8.2 -4.03234 | opp_overlap 789072 789082 789084 TCTTGGTTACAGAAA GTGCGCCC TTGGT GGGGGCAC TCATCTCATATGCAT Swoo_0560 788475 - 789311 + | peptidase U6 penicillin-insensitive murein endopeptidase Swoo_0561 791885 - 789324 - | Beta-N-acetylhexosaminidase TERM 721 789779 - 789791 + g 73 -9.1 -3.53779 | opp_overlap 789777 TCTCACTCCAAAGGT GGCCT TGA AGGCC TTGGTATTTTACCCC TERM 722 791146 - 791171 + g 74 -3.3 -5.07652 | AATCTATTGATTGCT GGGGTGAGTGA CTGC TTACTTATTCC TTTTGTTTTAAGCAC Swoo_0562 792848 - 791910 - | ROK family protein Swoo_0563 794209 - 792932 - | major facilitator transporter TERM 723 794406 - 794384 - R 100 -16.4 -4.72386 | opp_overlap 794384 TAAAGGATGTAAAAA GGCCAGAGAT TTA ATCTCTGGCC TTTCGGTGATAAGCA TERM 724 794384 - 794406 + r 100 -16.4 -3.68351 | opp_overlap 794384 TAAAGGATGTAAAAA GGCCAGAGAT TTA ATCTCTGGCC TTTCGGTGATAAGCA Swoo_0564 795731 - 794457 - | polysaccharide deacetylase TERM 725 795336 - 795320 - G 72 -6.6 -4.1964 | TGTAAGACTCTAAAA CAGTGA GGTTT TCACTG AACATAGAGGCATCA TERM 726 795806 - 795818 + H 70 -2.7 -5.0666 | TGTTTTTATTAGTGT GGTTA ATT TAATC TTTGTTTTTTAACTC TERM 727 796436 - 796448 + G 83 -5.5 -5.24129 | overlap 796435 GAGATGTTAGAGCGC TCCTC AAG GGGGA TTTTTTATAGCCCAG Swoo_0565 796091 - 796960 + | AraC family transcriptional regulator TERM 728 796988 - 796974 - T 100 -3.5 -6.01725 | opp_overlap 796968 AAGAAAAATAAAAAA GAAGC ACTAG GCCTC TTTTTATTTAGTTTC Swoo_0566 799607 - 797292 - | aminotransferase class V TERM 729 799291 - 799304 + g 83 -3.9 -5.32608 | TGCTCAGTTGAGCCA TATAG AATG CTATA TTTTTTCCCTTTTTT TERM 730 799769 - 799748 - R 100 -13.1 -4.67234 | opp_overlap 799748 ATGGAACGGGAAAAA GGGCATAGA AAGT TCTATGCCC TTTTAAATGGGGATC TERM 731 799748 - 799769 + r 100 -13.1 -4.18494 | opp_overlap 799748 ATGGAACGGGAAAAA GGGCATAGA AAGT TCTATGCCC TTTTAAATGGGGATC Swoo_0567 801054 - 800053 - | peptidase M48 Ste24p TERM 732 801045 - 801064 + g 100 -12.8 -4.17448 | GCTTTGTGGAGTTTT GGGGCGCC ATTA GGTGCCCC TTTATGGTTTCGTTC Swoo_0568 802269 - 801091 - | hypothetical protein Swoo_0569 802942 - 802481 - | hypothetical protein TERM 733 803910 - 803886 - g 71 -7.9 -3.85698 | GGGTGGTTTGATAAA TCTCTGCCTTG GCG CAAGGCAAATA AAAATTACCATAATG Swoo_0570 803064 - 804128 + | hypothetical protein TERM 734 804221 - 804177 - f 79 -11.2 -3.03159 | gap 1, opp_overlap 804177 804182, overlap 804182 TTAACTTGTCTAATA GAAAACAGTACAAAAAA-TAA ACTT TCAGTCTTTTGTACTGTTTTC TATCTGGGCCAAGCA TERM 735 804216 - 804182 - f 72 -5.3 -4.66537 | gap 1, opp_overlap 804177 804182, overlap 804177 TTGTCTAATAGAAAA CAGTACAAAAAA-TAA ACTT TCAGTCTTTTGTACTG TTTTCTATCTGGGCC Swoo_0571 804348 - 804923 + | ATP-dependent protease La Swoo_0572 805073 - 805993 + | pseudouridine synthase TERM 736 805990 - 806006 + F 75 -6.7 -4.36508 | TGCTTTATCTTTATC TTGAATA TTG TATTCAA TTGTTGTTTTTCTGC Swoo_0573 806093 - 806563 + | hypothetical protein Swoo_0574 808536 - 806587 - | hypothetical protein TERM 737 807051 - 807067 + g 78 -8.7 -4.11394 | GAGTGTTGGCAGTTC CTGGGTG AGC CATCCAG TTTTCAGCATCGACT Swoo_0575 809614 - 808649 - | oxidoreductase FAD/NAD(P)-binding subunit Swoo_0576 809983 - 809618 - | globin Swoo_0577 816350 - 810126 - | outer membrane adhesin like proteiin TERM 738 814878 - 814890 + g 72 -7.7 -3.92373 | TGACCCTGAACCTCC CGTTG CGA CAACG TTTGTCACTAAGGTG Swoo_0578 816601 - 819522 + | hypothetical protein TERM 739 821442 - 821428 - g 74 -10 -3.17212 | TGATGATGGGACTAA TCCACC AAC GGTGGA CGAAGAGCTTCGTGC Swoo_0579 819992 - 822406 + | hypothetical protein TERM 740 822426 - 822445 + F 100 -12.2 -4.91473 | opp_overlap 822428 822430 TAGTTGTGGTTTATA GAGAGAGC GTTC GCTCTCTC TTTCTTTTTAAATTC Swoo_0580 822471 - 822914 + | hypothetical protein Swoo_0581 822911 - 823216 + | hypothetical protein TERM 741 823227 - 823270 + F 73 -9.2 -2.97423 | opp_overlap 823237, overlap 823237 TTTAGATAGGTTTTG TATATAAAAATATAGCTATC TTAG GGTAGCTATATTTTTAATTA TGTCATGTTGTTCAA TERM 742 823260 - 823237 - f 81 -6.8 -4.96848 | opp_overlap 823227 823237 TTTTGTATATAAAAA TATAGCTATC TTAG GGTAGCTATA TTTTTAATTATGTCA TERM 743 823237 - 823260 + F 91 -9 -4.96646 | opp_overlap 823237, overlap 823227 TTTTGTATATAAAAA TATAGCTATC TTAG GGTAGCTATA TTTTTAATTATGTCA Swoo_0582 823333 - 824082 + | hypothetical protein TERM 744 824141 - 824102 - T 91 -13.9 -2.57244 | gap 2, opp_overlap 824112, overlap 824112 TCATTGATTAATTGA TGCC--TAAAAAGCGAGCC ACTA GGCTCGCTTTTTACTGGCA GTCAGTATCTGTTTG TERM 745 824129 - 824112 - T 100 -12.7 -4.60041 | opp_overlap 824112, overlap 824102 ATTGATGCCTAAAAA GCGAGCC ACTA GGCTCGC TTTTTACTGGCAGTC TERM 746 824112 - 824129 + T 100 -12.7 -4.72986 | opp_overlap 824112 824102 ATTGATGCCTAAAAA GCGAGCC ACTA GGCTCGC TTTTTACTGGCAGTC Swoo_0583 824366 - 824133 - | hypothetical protein Swoo_0584 825567 - 824356 - | major facilitator transporter TERM 747 824503 - 824550 + g 89 -2.6 -5.72207 | overlap 824502 824504 CAGTCCAGCGCCTAT GCCATAGCCTAAGGTTTGGTAT TTAG AGACTAAGCCTGTGGCGATCGC TTTTTTTCCTTTCCC TERM 748 826997 - 826983 - g 73 -10 -3.12351 | GTGGTGGATATTCAA GACAGG CTT CCTGTC GGCCTCTTCTACCGA Swoo_0585 825672 - 828449 + | IucA/IucC family protein TERM 749 829720 - 829739 + G 74 -7.8 -4.07568 | opp_overlap 829720, overlap 829721 GGAGTCAATTATAGA TTGGGGCC AGGA GGCTCCAG TTTTAAACAAAGAAA Swoo_0586 828449 - 829783 + | L-lysine 6-monooxygenase (NADPH) TERM 750 830815 - 830790 - g 74 -5.4 -4.62783 | gap 1, overlap 830791 830793 GACTCAGTCTAAAAA GC-AGGCTGCA CGTAT CGCAGCCCAGC CTCTAAGGTTACCTA Swoo_0587 829783 - 832044 + | TonB-dependent receptor TERM 751 832097 - 832070 - f 76 -9.9 -3.11786 | opp_overlap 832070, overlap 832059 832068 832066 832064 TATAGCTAAGAGATA GCAGCAGAATC GAATCT GGTTCTGCTGC TTTTTATTTGTCTGA TERM 752 832070 - 832097 + F 100 -12.8 -5.42975 | opp_overlap 832059 832070 832068 832066 832064 TATAGCTAAGAGATA GCAGCAGAATCG AATC TGGTTCTGCTGC TTTTTATTTGTCTGA Swoo_0588 832127 - 833110 + | dTDP-4-dehydrorhamnose reductase Swoo_0589 833151 - 834419 + | integral membrane sensor signal transduction histidine kinase Swoo_0590 834416 - 834982 + | two component Fis family transcriptional regulator TERM 753 835036 - 835000 - T 100 -7.9 -5.80817 | overlap 835001 CTGAACATAAAAAAA TCCCCGAGCTTTCTC AGCAGAG GAGAGGGCTCGGGGT GGGCAAACGCAGTGG TERM 754 835035 - 835001 - T 90 -11.4 -4.06863 | overlap 835000 TGAACATAAAAAAAT CCCCGAGCTTTCTC AGCAGAG GAGAGGGCTCGGGG TGGGCAAACGCAGTG TERM 755 835278 - 835309 + T 95 -14 -3.05238 | gap 1, opp_overlap 835280 835284, overlap 835284 TAACAAAGGCTAATC T-ACAAACTGCGACA AGG TGTCGCAGTTTGTCA TCGTTTGTCATAGTT TERM 756 835306 - 835280 - T 100 -18.2 -2.56314 | opp_overlap 835278 835284, overlap 835284 ACAAAGGCTAATCTA CAAACTGCGACA AGG TGTCGCAGTTTG TCATCGTTTGTCATA TERM 757 835284 - 835302 + T 100 -13.2 -4.04811 | opp_overlap 835280 835284, overlap 835278 AGGCTAATCTACAAA CTGCGACA AGG TGTCGCAG TTTGTCATCGTTTGT TERM 758 835302 - 835284 - T 100 -13.2 -3.97636 | opp_overlap 835284 835278, overlap 835280 AGGCTAATCTACAAA CTGCGACA AGG TGTCGCAG TTTGTCATCGTTTGT Swoo_0591 836268 - 835354 - | LysR family transcriptional regulator Swoo_0592 836368 - 836772 + | hypothetical protein TERM 759 836804 - 836794 - g 70 -5.4 -4.37886 | opp_overlap 836794 TTACCCCCTACAAAA CAAC AAA GTTG TCATTGAGTAACCGC TERM 760 837608 - 837579 - g 73 -9.3 -3.4252 | gap 1 CTGCACCTATCAGAA GCGGAT-TGGGACG ATG CGCCCCAGATCCCC GCTAACTTTAGAGTG Swoo_0593 836769 - 837860 + | NADH:flavin oxidoreductase/NADH oxidase Swoo_0594 837874 - 838065 + | hypothetical protein TERM 761 839070 - 839100 + G 81 -6.3 -5.011 | gap 1, overlap 839074 AGGTTCTACCGGTTT TG-GGTCAAGCTTC GAAT GAAGCTTGATTACA TTTTCTTATTTAGCT Swoo_0595 838202 - 839095 + | NAD-dependent epimerase/dehydratase TERM 762 839074 - 839095 + T 85 -11.7 -3.48144 | overlap 839070 TCTACCGGTTTTGGG TCAAGCTTC GAAT GAAGCTTGA TTACATTTTCTTATT Swoo_0596 841725 - 839602 - | hypothetical protein TERM 763 840530 - 840549 + g 81 -10.8 -3.46913 | overlap 840525 TGAATTTTAGTATCT TCAGGAGA TATA TCTCCTGA TTCTCCATTGTGTGT Swoo_0597 844033 - 841712 - | hypothetical protein TERM 764 842671 - 842684 + g 70 -6.7 -4.03204 | CACTAGAAACTACGG CCTCA TCTG TGAGG TTTATGGCTTTAGTA TERM 765 844588 - 844563 - R 83 -11.3 -3.6715 | opp_overlap 844562 TCAGGCAAGCGCAAA CCTTCTTGTTG GAAA CAACAAAAAGG CTTGAATGCCTGTAA Swoo_0598 845767 - 844610 - | sulphate transporter Swoo_0599 846701 - 845982 - | short-chain dehydrogenase/reductase SDR Swoo_0600 846907 - 847824 + | LysR family transcriptional regulator Swoo_0601 848273 - 849187 + | LysR family transcriptional regulator Swoo_0602 849343 - 849552 + | Flp/Fap pilin component TERM 766 850022 - 850037 + G 70 -6.1 -4.18018 | GGCGAATTAGAGGGA GCGAG TCAAAC CTCGC TTTTGGCTACCGCAG Swoo_0603 849575 - 850069 + | peptidase A24A prepilin type IV TERM 767 850741 - 850767 + G 75 -8.6 -3.84451 | AACCCGTATTGTTAT CGAGGTGGATCC AGA GGATCTTCCCCG TTTAACTTTGGCCCA Swoo_0604 850085 - 850924 + | hypothetical protein Swoo_0605 850927 - 852267 + | type II and III secretion system protein Swoo_0606 852264 - 852755 + | hypothetical protein Swoo_0607 852757 - 853992 + | hypothetical protein Swoo_0608 853989 - 855260 + | type II secretion system protein E TERM 768 855488 - 855476 - g 72 -7.7 -3.86346 | GCACTGGGTGATAAA GCTTG GCT CAAGC TGACAGGTTTTTTGC Swoo_0609 855257 - 856165 + | type II secretion system protein TERM 769 856842 - 856830 - g 72 -3.3 -4.93898 | overlap 856841 ACAGGATTAGAAAAA GCGCT ATT AGAGC TCAGTGAGCGGATCC Swoo_0610 856251 - 857096 + | type II secretion system protein Swoo_0611 857100 - 857813 + | TPR repeat-containing protein Swoo_0612 857813 - 858304 + | TadE family protein TERM 770 858626 - 858638 + G 70 -9.1 -3.14961 | opp_overlap 858618, overlap 858624 858622 CGACAAAGGTATTGA GGGAG GGG CTCCC TGTATTCCTGGTGAT Swoo_0613 858294 - 858818 + | hypothetical protein Swoo_0614 858821 - 860332 + | hypothetical protein Swoo_0615 860336 - 861025 + | OmpA/MotB domain-containing protein Swoo_0616 861332 - 861135 - | hypothetical protein TERM 771 861593 - 861615 + H 82 -5 -5.4505 | GGAGCATAAGGTCTA TACTTTTAAT ATT ATTAATAGTA TTTTTTGTTAGGGCC Swoo_0617 861670 - 862242 + | hypothetical protein TERM 772 863590 - 863538 - g 72 -9.9 -3.23395 | gap 1, opp_overlap 863541 863542, overlap 863539 ATTCAGCATTATGAA GCGCTGATCCGGTGGGATCATCCC ATTAAG GGGGTTATCCCACCGGATCA-CTT TATTGAAATTGCTGA TERM 773 863589 - 863539 - g 84 -13.4 -2.53715 | gap 1, opp_overlap 863541 863542, overlap 863538 TTCAGCATTATGAAG CGCTGATCCGGTGGGATCATCCC ATTAAG GGGGTTATCCCACCGGATCA-CT TTATTGAAATTGCTG TERM 774 863541 - 863588 + G 100 -19.3 -4.21319 | opp_overlap 863539 863538, overlap 863542 CAGCATTATGAAGCG CTGATCCGGTGGGATCATCCC ATTAAG GGGGTTATCCCACCGGATCAC TTTATTGAAATTGCT TERM 775 863542 - 863587 + G 100 -22.8 -3.12069 | opp_overlap 863539 863538, overlap 863541 AGCATTATGAAGCGC TGATCCGGTGGGATCATCCC ATTAAG GGGGTTATCCCACCGGATCA CTTTATTGAAATTGC Swoo_0618 862242 - 864170 + | diguanylate cyclase/phosphodiesterase Swoo_0619 864519 - 865712 + | putative plasmid transfer protein Swoo_0620 866660 - 865926 - | hypothetical protein TERM 776 865989 - 865999 + g 81 -3.2 -5.38839 | GCAAAGTACCAAGGT CATG CTG CGTG TTTTATTTTTATCTA TERM 777 866514 - 866496 - G 70 -7.4 -3.91027 | overlap 866497 TAACGAGATAGTAAA CCCCATGA TGA TCACGGGA GCTGGAACGAGATCA TERM 778 866747 - 866725 - R 100 -19.2 -4.84353 | opp_overlap 866720 866719 ACAAAGTAAAACAAA CAGGGACCGC ATT GCGGTCCCTG AGGTGAGTATATATT Swoo_0621 867086 - 866772 - | methionine repressor, MetJ Swoo_0622 867319 - 868485 + | O-succinylhomoserine (thiol)-lyase Swoo_0623 868507 - 870900 + | aspartate kinase Swoo_0624 871549 - 872439 + | 5,10-methylenetetrahydrofolate reductase TERM 779 872512 - 872535 + F 93 -10.4 -5.06505 | opp_overlap 872508 872512 872510 ATAGAATAATATAGA TGCTCTACTT TACC AAGTAGGGCA TTTTTGTATCTAATT TERM 780 872535 - 872512 - f 70 -8.2 -3.22298 | opp_overlap 872512, overlap 872508 872510 ATAGAATAATATAGA TGCTCTACTT TACC AAGTAGGGCA TTTTTGTATCTAATT Swoo_0625 872593 - 872976 + | hypothetical protein Swoo_0626 872973 - 873596 + | hypothetical protein Swoo_0627 873606 - 873821 + | hypothetical protein TERM 781 873838 - 873827 - T 74 -5.8 -4.63932 | GAGGGTTTAAGAAAA GCCA TCCT TGGC AGATTGAATCGATGT Swoo_0628 874391 - 873981 - | hypothetical protein Swoo_0629 874537 - 875025 + | hypothetical protein Swoo_0630 875192 - 875914 + | LmbE family protein Swoo_0631 876068 - 877030 + | hypothetical protein Swoo_0632 877430 - 877041 - | hypothetical protein Swoo_0633 877588 - 878724 + | 2-hydroxyglutarate dehydrogenase Swoo_0634 879230 - 878745 - | MarR family transcriptional regulator TERM 782 879378 - 879351 - H 100 -13 -4.91109 | opp_overlap 879354 CTCTGATGACAAAAA GAATATAGTAAC AAGT GTTACTATATTC TTAAGGTAAGTTATG TERM 783 879354 - 879375 + H 74 -8.9 -3.6579 | opp_overlap 879351 TGATGACAAAAAGAA TATAGTAAC AAGT GTTACTATA TTCTTAAGGTAAGTT TERM 784 879642 - 879627 - g 70 -6.1 -4.19483 | opp_overlap 879641 GGACAGAGACAGAAA CACCC CTGAGT GGGTG CAACATATTGCATTT Swoo_0635 879391 - 879939 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 785 879957 - 879985 + T 91 -13.3 -2.57757 | opp_overlap 879957 879964, overlap 879964 CCAATCAACAGAAAA CAAAAAAGGAGCC TAG GGCTCCTTTTTTA TGGATTCACTTAGTT TERM 786 879985 - 879957 - T 100 -15.5 -4.73864 | opp_overlap 879957 879964, overlap 879964 CCAATCAACAGAAAA CAAAAAAGGAGCC TAG GGCTCCTTTTTTA TGGATTCACTTAGTT TERM 787 879964 - 879978 + T 100 -11.4 -5.31456 | opp_overlap 879957 879964, overlap 879957 ACAGAAAACAAAAAA GGAGCC TAG GGCTCC TTTTTTATGGATTCA TERM 788 879978 - 879964 - T 100 -11.4 -5.8901 | opp_overlap 879964 879957, overlap 879957 ACAGAAAACAAAAAA GGAGCC TAG GGCTCC TTTTTTATGGATTCA Swoo_0636 881844 - 880027 - | DEAD/DEAH box helicase domain-containing protein Swoo_0637 883142 - 882084 - | peptidase M28 Swoo_0638 886005 - 883168 - | excinuclease ABC, A subunit TERM 789 885250 - 885277 + g 72 -7.8 -3.90425 | gap 1, opp_overlap 885242 885247 AGGACAAGCAAAGTT TGCCGA-GAAGAG TAG CTCTTCATCGGGA TTCTTACTTTCGCTA Swoo_0639 886227 - 887594 + | major facilitator transporter Swoo_0640 887672 - 888349 + | single-strand binding protein TERM 790 888401 - 888384 - f 78 -9.9 -3.24709 | opp_overlap 888384 TAAAACATGTATGAA GCCTCTT ATTT AAGAGGC TTTTTTGTTGCCTAT TERM 791 888384 - 888401 + F 100 -9.9 -5.49234 | opp_overlap 888384 TAAAACATGTATGAA GCCTCTT ATTT AAGAGGC TTTTTTGTTGCCTAT Swoo_0641 888644 - 889039 + | curli production assembly/transport component CsgE, putative Swoo_0642 889063 - 889455 + | curli production assembly/transport component CsgF, putative Swoo_0643 889452 - 890219 + | curli production assembly/transport component CsgG TERM 792 890285 - 890317 + F 84 -7.9 -4.81685 | opp_overlap 890285 CTTTTTGAGAACAAA GCAGCAATAAC TAGTGTTTAAT GTTATTGCTGC TTTTTACTGCTTGAT TERM 793 890317 - 890285 - f 79 -7.9 -4.30719 | opp_overlap 890285 CTTTTTGAGAACAAA GCAGCAATAAC TAGTGTTTAAT GTTATTGCTGC TTTTTACTGCTTGAT TERM 794 890733 - 890769 + G 71 -4.6 -4.71426 | gap 1, overlap 890738 890741 TTGTCAGTAAGTCTT CAGAG-CTTTTTGATGG GCTA CTATCAAATAGTTTCTG TTTTATTGCTCAAAA TERM 795 890738 - 890763 + G 72 -5.5 -4.56159 | overlap 890733 890741 AGTAAGTCTTCAGAG CTTTTTGATGG GCTA CTATCAAATAG TTTCTGTTTTATTGC Swoo_0644 890624 - 891289 + | LuxR family transcriptional regulator TERM 796 891319 - 891346 + T 100 -13.6 -3.43445 | opp_overlap 891325, overlap 891325 CTGATATAAAGTTAT TAAAAAGGGAGC CTAA GCTCCCTTTTTG CTTTTCTTACTAATA TERM 797 891325 - 891340 + T 93 -10.4 -5.17786 | opp_overlap 891325, overlap 891319 TAAAGTTATTAAAAA GGGAGC CTAA GCTCCC TTTTTGCTTTTCTTA TERM 798 891340 - 891325 - T 91 -10.4 -4.78764 | opp_overlap 891325 891319 TAAAGTTATTAAAAA GGGAGC CTAA GCTCCC TTTTTGCTTTTCTTA Swoo_0645 892878 - 891367 - | curlin-associated protein Swoo_0646 893324 - 892893 - | curlin-associated protein Swoo_0647 893830 - 896340 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 799 896363 - 896378 + T 100 -11.8 -6.07969 | AGTTACTTGTCATTA GCGGCC CTCG GGCCGC TTTTTTTTGGTTTTA Swoo_0648 899421 - 896404 - | collagenase TERM 800 899837 - 899851 + H 70 -5 -4.64076 | opp_overlap 899837 GGATAAAATATACAA TAGTCA AAG TGGCTA TTTTGTACTTTCCTT Swoo_0649 900032 - 901051 + | PIG3 family NAD(P)H quinone oxidoreductase Swoo_0650 901472 - 901909 + | hypothetical protein TERM 801 901907 - 901926 + T 75 -9.4 -3.24825 | opp_overlap 901910, overlap 901910 GGTGGTTTAGAGGAG TAAGCCTT AATT AAGGCTTA TCTTCATTAAACTGC Swoo_0651 902964 - 901933 - | aldose 1-epimerase TERM 802 902500 - 902487 - G 72 -3.1 -4.93365 | opp_overlap 902487, overlap 902480 CTGTAGAAGCAAAAA TCTCC ATAT AGAGA TTATTGCCTGCGAGC Swoo_0652 904176 - 903010 - | galactokinase TERM 803 904286 - 904317 + r 74 -8.8 -3.65828 | gap 1, opp_overlap 904286 904288 TTTTGGTACTTAATA TACCCAAGCTAGCTC AAG GTGCT-GTTTGGGTA TTTACCAATTTATAT Swoo_0653 906196 - 904562 - | sodium/hydrogen exchanger TERM 804 906614 - 906589 - g 72 -3.3 -5.01811 | opp_overlap 906593 GTAGGAAAGCAAAAA TCCAGCTCA ATGTTTGA TGAGCTTGA TGCCGAGCTTGAGAA Swoo_0654 906496 - 907638 + | putative signal transduction protein TERM 805 908119 - 908108 - f 75 -4.4 -5.02323 | CTATTATAAAGAAAA TAGG CGGG CCTA GTGGCTTTGAGAGCC Swoo_0655 908162 - 909379 + | succinylornithine transaminase family protein TERM 806 909390 - 909414 + F 86 -10.8 -4.11183 | overlap 909375 CCTAATTGGCATTTA GGGTATTGGT ATAAA ACCGATACCC TTATTTGTCATAGGG Swoo_0656 909519 - 910538 + | arginine N-succinyltransferase TERM 807 910656 - 910645 - g 70 -5.8 -4.30576 | TCTGGAGCAGTAAAA CAGC TACC GCTG AACAGGTTAATACCG TERM 808 911178 - 911198 + G 75 -8.3 -3.75015 | overlap 911181 GCCCTAGCTTCACAT GAGCAGATC GAT GGTCTGTTC TTTACTGGAAGTTCT Swoo_0657 910548 - 912008 + | succinylglutamic semialdehyde dehydrogenase TERM 809 912027 - 912046 + F 100 -9.3 -5.24531 | opp_overlap 912026 912024 912027 TTTTGAAAAAATGAT GGGAGAC CTTAGT GTCTCCC TTTTTTATAACCAGT TERM 810 912046 - 912027 - f 71 -9.3 -2.62111 | opp_overlap 912027, overlap 912026 912024 TTTTGAAAAAATGAT GGGAGAC CTTAGT GTCTCCC TTTTTTATAACCAGT TERM 811 912177 - 912156 - f 100 -8.1 -6.09196 | gap 1, overlap 912159 GTGAAAATAAAAAAA CAG-CATAGC TTA GCTATGACTG AGTAACACGATGCTG TERM 812 912173 - 912159 - f 72 -8.6 -3.36605 | overlap 912156 AAAATAAAAAAACAG CATAGC TTA GCTATG ACTGAGTAACACGAT TERM 813 912292 - 912312 + G 72 -8.3 -3.61715 | GAAAGGTTCATCAGC TGCTCTCAC AGG GTGAGACCA TTATTAACGACCATA Swoo_0658 912207 - 913004 + | hypothetical protein TERM 814 913050 - 913017 - T 81 -11.8 -2.86475 | opp_overlap 913024, overlap 913023 913024 TAATCTGATATCAGA TCAAAAGGGCCGTC TAACGT GACGGCCTTTTCGA GCTTGTCGTTAAAAA TERM 815 913044 - 913023 - T 78 -7.2 -4.38171 | opp_overlap 913024, overlap 913017 913024 GATATCAGATCAAAA GGGCCGTC TAACGT GACGGCCT TTTCGAGCTTGTCGT TERM 816 913043 - 913024 - T 79 -10.7 -3.2218 | opp_overlap 913024, overlap 913023 913017 ATATCAGATCAAAAG GGCCGTC TAACGT GACGGCC TTTTCGAGCTTGTCG TERM 817 913024 - 913043 + T 85 -10.7 -4.1585 | opp_overlap 913023 913017 913024 ATATCAGATCAAAAG GGCCGTC TAACGT GACGGCC TTTTCGAGCTTGTCG Swoo_0659 914384 - 913059 - | integral membrane sensor signal transduction histidine kinase Swoo_0660 915055 - 914381 - | two component transcriptional regulator Swoo_0661 915432 - 915103 - | hypothetical protein TERM 818 915453 - 915477 + r 100 -12.9 -3.87373 | opp_overlap 915454, overlap 915454 TTGTCTCCAAAAAAA ATGGCCTGAGA TAA TCTCAGGCCAC TTTATCGAAGCTATC TERM 819 915454 - 915476 + r 100 -16.4 -2.92102 | opp_overlap 915454, overlap 915453 TGTCTCCAAAAAAAA TGGCCTGAGA TAA TCTCAGGCCA CTTTATCGAAGCTAT TERM 820 915476 - 915454 - R 100 -16.4 -5.75342 | opp_overlap 915454 915453 TGTCTCCAAAAAAAA TGGCCTGAGA TAA TCTCAGGCCA CTTTATCGAAGCTAT Swoo_0662 916150 - 915515 - | Crp/FNR family transcriptional regulator TERM 821 915553 - 915563 + g 78 -5.4 -4.89477 | TTGTTTTACCGTGTG CTTG GAT CAAG TTTTGTTCTTCAAGC TERM 822 916655 - 916670 + G 71 -4 -4.74103 | gap 1, opp_overlap 916655, overlap 916652 TTACCTCGGTAATGA GCACTGC TGC GCA-TGC TTTTTCAATTCCACA TERM 823 916979 - 916989 + G 70 -6.8 -4.1523 | opp_overlap 916970, overlap 916973 GTAAATGGGCCGAAT TCCG ACT CGGA TTTATCTATGCTGCC Swoo_0663 916600 - 917379 + | Sel1 domain-containing protein Swoo_0664 917586 - 917945 + | hypothetical protein Swoo_0665 918163 - 919524 + | outer membrane efflux protein Swoo_0666 919524 - 920849 + | biotin/lipoyl attachment domain-containing protein TERM 824 921738 - 921724 - g 76 -7.8 -4.19974 | opp_overlap 921723, overlap 921694 921686 AAAATGGCGAAGAAA CAGTGC TTG GCACCG CCTTTATGTTGCTGG Swoo_0667 920862 - 923990 + | CzcA family heavy metal efflux protein TERM 825 924028 - 924046 + T 100 -13.2 -5.79595 | opp_overlap 924028 GTAGATAGAACCAAA CCAGCCTA ACC TAGGCTGG TTTTTTGTTTTAGAG TERM 826 924046 - 924028 - T 100 -13.2 -4.06361 | opp_overlap 924028 GTAGATAGAACCAAA CCAGCCTA ACC TAGGCTGG TTTTTTGTTTTAGAG Swoo_0668 925585 - 924698 - | phosphoribulokinase Swoo_0669 925920 - 925684 - | hypothetical protein Swoo_0670 926899 - 925928 - | alpha/beta hydrolase fold TERM 827 926000 - 925988 - G 75 -9.1 -3.57971 | opp_overlap 925988 ATACTTAGGTTTAAA CGGTG TTC CACCG TTGATGAATCCCACA TERM 828 925988 - 926000 + g 70 -9.1 -3.18264 | opp_overlap 925988 ATACTTAGGTTTAAA CGGTG TTC CACCG TTGATGAATCCCACA Swoo_0671 927304 - 927813 + | hypothetical protein TERM 829 928286 - 928262 - g 81 -10.7 -3.53444 | opp_overlap 928253 928252 928269, overlap 928268 TGAGTTCTGGGCAAA GGAGAAGTCGG TTA CCGATCTCTCC AGAGCCGAGCTTGAT Swoo_0672 927882 - 929480 + | glucose-methanol-choline oxidoreductase TERM 830 929515 - 929501 - T 71 -8.5 -3.39668 | opp_overlap 929504, overlap 929493 GGGTAAAGCTGAGAA GGGCG GGCTT CGCCC TACTAGGGCGGCACT TERM 831 929874 - 929908 + T 76 -7.2 -4.26202 | gap 1, opp_overlap 929882 929885, overlap 929876 GGCTTGTTCAAGACT TGGGATAAGGACGCG GCTTCG CGCGGCCT-ATCCTA TTTGTTAGTACATAT TERM 832 929876 - 929906 + T 72 -7.6 -3.72775 | gap 1, opp_overlap 929882 929885, overlap 929874 CTTGTTCAAGACTTG GGATAAGGACGCG GCTTCG CGCGGCCT-ATCC TATTTGTTAGTACAT Swoo_0673 930498 - 929938 - | hypothetical protein Swoo_0674 930949 - 930608 - | hypothetical protein Swoo_0675 931659 - 931207 - | GCN5-related N-acetyltransferase Swoo_0676 932046 - 931729 - | hypothetical protein TERM 833 932161 - 932179 + r 75 -7.6 -4.07568 | opp_overlap 932160 TTAATCATCAATGAG TTAAAGTT GGC AACTTTAA TTTTAGGGGGGAAGC TERM 834 932379 - 932395 + r 75 -9.5 -3.34398 | overlap 932377 CGACTTCAGGGCGAA GTTTCAC CCT GTGAAAC TCTTTGAGCGCGAGG Swoo_0677 933181 - 932744 - | hypothetical protein TERM 835 932917 - 932927 + g 73 -4.6 -4.79667 | GTTGATATTCAGTTT CGGC AAG GCTG TTTTTACTCAGTTTT Swoo_0678 935224 - 933251 - | ABC transporter related Swoo_0679 935351 - 935551 + | hypothetical protein TERM 836 936331 - 936352 + G 80 -7.3 -4.57073 | gap 1 ATCATTGCCGTCATC CTGGA-CCTG TTC CGGGATCCAG TTTTTCAACCACCTA Swoo_0680 936209 - 936496 + | hypothetical protein Swoo_0681 936554 - 937087 + | phenylacetic acid degradation-related protein Swoo_0682 937293 - 937706 + | hypothetical protein Swoo_0683 938428 - 937709 - | XRE family transcriptional regulator TERM 837 938595 - 938577 - R 85 -11.8 -3.59109 | GGAGATAGGAGAGAA GACCTGAA ATA TTCAGGTC TAGATGACTCAGGAC Swoo_0684 938982 - 938635 - | hypothetical protein Swoo_0685 940294 - 939092 - | globin TERM 838 939793 - 939783 - G 80 -5.4 -5.07652 | GGGGTGAAAACAAAA CTAG TGA CTAG GCTCGACTCTTCACG TERM 839 939856 - 939866 + g 70 -5.4 -4.3586 | GCCAACCACCTGCTT GAGT TGC ACTC TTTTGGTATAGCTCA Swoo_0686 941662 - 940367 - | NnrS family protein TERM 840 942144 - 942187 + H 100 -13.6 -3.49584 | gap 1, opp_overlap 942152 942154, overlap 942141 942139 942137 942145 TCACTAAGCCTGTTG T-GAGTCAATATGACTACA TGGTAGT TGTAGTCATATTGACTCTA TTGATGTGTTTTTAG TERM 841 942145 - 942185 + H 100 -18.7 -3.30173 | opp_overlap 942152 942154, overlap 942144 942141 942139 942137 CACTAAGCCTGTTGT GAGTCAATATGACTACA TGGTAGT TGTAGTCATATTGACTC TATTGATGTGTTTTT Swoo_0688 942261 - 943847 + | NifA subfamily transcriptional regulator Swoo_0689 944075 - 944758 + | hypothetical protein TERM 842 945721 - 945741 + G 72 -9.7 -3.14132 | opp_overlap 945718 945717 945726, overlap 945724 945726 AGTAACAAAGATCGC CAAAAGGCG CTA CGCCTATTG TTGCTGCAACACCGG TERM 843 945736 - 945726 - g 76 -8.2 -4.15543 | opp_overlap 945724 945721 945726, overlap 945718 945717 CAAAGATCGCCAAAA GGCG CTA CGCC TATTGTTGCTGCAAC Swoo_0690 945007 - 946416 + | DEAD/DEAH box helicase domain-containing protein TERM 844 946499 - 946469 - T 95 -14.2 -2.9462 | opp_overlap 946474, overlap 946474 GACTTATCTAAACGA TAAAAGGAGTGAAC TTA GTTCACTCCTTTTT TAGTATTTAGACTGA TERM 845 946474 - 946494 + T 100 -14.1 -5.32699 | opp_overlap 946474 946469 ATCTAAACGATAAAA GGAGTGAAC TTA GTTCACTCC TTTTTTAGTATTTAG TERM 846 946494 - 946474 - T 100 -14.1 -4.62168 | opp_overlap 946474, overlap 946469 ATCTAAACGATAAAA GGAGTGAAC TTA GTTCACTCC TTTTTTAGTATTTAG Swoo_0691 947435 - 946527 - | succinylglutamate desuccinylase/aspartoacylase Swoo_0692 949332 - 947422 - | CBS domain-containing protein Swoo_0693 950731 - 949562 - | diguanylate cyclase TERM 847 949806 - 949818 + g 71 -7.7 -3.80625 | opp_overlap 949806 949810 TCGCCTCCCATACGA CAGAC AAG GTCTG TTTCCCTTGTGCAGC Swoo_0694 951100 - 952377 + | hypothetical protein TERM 848 952405 - 952390 - T 76 -4.7 -5.12617 | opp_overlap 952390 TAACTAGGGAAAAAA CCGAA TTTAGC TTCGG CTTTTTCATGGGCAA Swoo_0695 952884 - 952441 - | hypothetical protein TERM 849 952698 - 952667 - G 79 -6.6 -4.60487 | gap 1, opp_overlap 952675 CAGTATTGCCAAAAA GCATC-TAAGCTCAG CCA CTGTGCTTGTGATGC TTGCCATGCTCTTTC Swoo_0696 953910 - 952996 - | putative esterase Swoo_0697 954509 - 954021 - | glutathione-dependent formaldehyde-activating GFA TERM 850 955636 - 955646 + G 70 -6.8 -4.05181 | opp_overlap 955635 955636 TATTTAAGGTGAAAG GTGC GCA GCAC TTTGATCTTTATGAT Swoo_0698 954693 - 955730 + | peptidase S15 TERM 851 955761 - 955787 + F 79 -7.3 -4.55689 | GCATAACCTAAGATA CAGGCAAGTGG GCTAA CTGTTTGCCTG TTTTATCTAGATGAT TERM 852 956733 - 956706 - g 74 -3.4 -5.14563 | gap 1, opp_overlap 956715 GGTCCGATGAAAAAA GCTCAGCTTGCAG CTT CT-CAAGGGGAGC CTGCTTTAAAGCAGA TERM 853 957013 - 957041 + G 77 -7.5 -4.33258 | gap 1 GCTTTAAAAATATGT TGCCAGCGATCG GGACTG TGATCGC-GGCA TTTATCTTTAAAGAT Swoo_0699 956052 - 957434 + | Na+/H+ antiporter NhaC TERM 854 957490 - 957457 - f 89 -7.5 -5.1287 | gap 1, opp_overlap 957461, overlap 957461 CCTATAGTCAAAAAA TTAACACCAGAGCAGT TGA ACTGC-CTGGTGTTTT TTTATATCTGCCACA TERM 855 957461 - 957486 + F 100 -12.7 -5.76633 | gap 1, opp_overlap 957457 957461 TAGTCAAAAAATTAA CACCAGAGCAGT TGA ACTGC-CTGGTG TTTTTTTATATCTGC TERM 856 957486 - 957461 - f 100 -12.7 -3.94773 | gap 1, opp_overlap 957461, overlap 957457 TAGTCAAAAAATTAA CACCAGAGCAGT TGA ACTGC-CTGGTG TTTTTTTATATCTGC Swoo_0700 957604 - 958209 + | ECF subfamily RNA polymerase sigma-24 factor TERM 857 958977 - 958961 - g 71 -4.3 -4.59773 | overlap 958964 CGTGATTGCTAAAAA CACCAGC TTG GCCGTTG AAGCTTTGCCGCTTG Swoo_0701 958206 - 959285 + | anti-FecI sigma factor, FecR TERM 858 959709 - 959693 - g 70 -3 -4.88485 | overlap 959696 959699 CAATGAAAAAAACAA CAATAG CGGCT CTACTG CCCCTAGCGATAGGG Swoo_0702 959395 - 962241 + | TonB-dependent receptor TERM 859 962224 - 962235 + T 72 -5.8 -4.41047 | opp_overlap 962234 TACTACTATGCGGGG GCTG AATA CAGC TTTTAATTAAGCAGT TERM 860 962318 - 962283 - T 100 -20.8 -2.78463 | opp_overlap 962293, overlap 962293 ATTGTCTTCACCAGA CACAAAAAAACCTAGC GAAA GCTAGGTTTTTTTGTG TCGCAATAGAAGTGG TERM 861 962308 - 962293 - T 100 -9 -5.76633 | opp_overlap 962293, overlap 962283 CCAGACACAAAAAAA CCTAGC GAAA GCTAGG TTTTTTTGTGTCGCA TERM 862 962293 - 962308 + T 100 -9 -5.71712 | opp_overlap 962293 962283 CCAGACACAAAAAAA CCTAGC GAAA GCTAGG TTTTTTTGTGTCGCA Swoo_0703 963819 - 962335 - | DEAD/DEAH box helicase domain-containing protein TERM 863 964000 - 964029 + H 71 -9.3 -2.56095 | opp_overlap 964000 963997, overlap 963996 TGTATACCCAAACAA CTTCAAGGTGCAG GATT CAGCATCTTGAGG TCGCTTGGGTATAGC Swoo_0704 964162 - 964371 + | hypothetical protein Swoo_0705 964455 - 964802 + | hypothetical protein TERM 864 964890 - 964854 - f 91 -10.2 -4.7629 | gap 1, opp_overlap 964859, overlap 964859 TCATTAAGCGAAAAA TAGAAGGCCGGTAGAGC AAAC GCTC-ACCGGCCTTTTT TGTTTTTGTGCTTTG TERM 865 964885 - 964859 - f 100 -14.5 -4.10257 | gap 1, opp_overlap 964859, overlap 964854 AAGCGAAAAATAGAA GGCCGGTAGAGC AAAC GCTC-ACCGGCC TTTTTTGTTTTTGTG TERM 866 964859 - 964885 + F 100 -14.5 -5.98675 | gap 1, opp_overlap 964859 964854 AAGCGAAAAATAGAA GGCCGGTAGAGC AAAC GCTC-ACCGGCC TTTTTTGTTTTTGTG TERM 867 965475 - 965496 + F 79 -7.3 -4.68645 | opp_overlap 965478, overlap 965478 AGGCTTATAATGAAA GAACCCAGT TTTC ACTGGGTTA TTTTGCTTTTAAATG TERM 868 965478 - 965493 + F 84 -9 -4.43392 | opp_overlap 965478, overlap 965475 CTTATAATGAAAGAA CCCAGT TTTC ACTGGG TTATTTTGCTTTTAA TERM 869 965493 - 965478 - f 79 -9 -4.12296 | opp_overlap 965478 965475 CTTATAATGAAAGAA CCCAGT TTTC ACTGGG TTATTTTGCTTTTAA Swoo_0706 965714 - 966826 + | hypothetical protein TERM 870 967661 - 967676 + G 93 -2.5 -5.77856 | TCACCCTAAATCACA GGCTC AGTTAG GAGTC TTTTTTTCCTTTATT Swoo_0707 966819 - 967943 + | hypothetical protein Swoo_0708 967952 - 968719 + | hypothetical protein TERM 871 969472 - 969493 + T 100 -13.1 -4.32201 | opp_overlap 969472 AGTCTTATAAAAAAA TCCGATGAC TTGG GTCATCGGA TTTTGGGTTACTTAG TERM 872 969493 - 969472 - T 100 -13.1 -5.61596 | opp_overlap 969472 AGTCTTATAAAAAAA TCCGATGAC TTGG GTCATCGGA TTTTGGGTTACTTAG Swoo_0709 971575 - 969578 - | hypothetical protein TERM 873 969645 - 969656 + g 71 -4.4 -4.71061 | GATCTAAATGGGCTC CAAC CTAT GTTG TTTTTGGCTCTGGCT TERM 874 972242 - 972228 - H 79 -8.6 -3.87815 | TTCTAGTCGTAGAAA CATAGC GAA GCTATG ACCATAAAAATCCCT TERM 875 973372 - 973336 - g 72 -9.6 -3.16191 | gap 1 CCAGAGTTTTATCAA CCTCTGCGTGATA-TGG GAAC CCACTATCATGCAAAGG CCCAAGCGATAGGGG Swoo_0710 972430 - 974253 + | cysteine ABC transporter permease/ATP-binding protein TERM 876 974440 - 974456 + G 76 -7.9 -4.21343 | TTAACTATTTTACCC CCGCAGG TGG CGTGCGG TTTCTCTCTATTGCG TERM 877 974700 - 974711 + G 74 -2.2 -5.26316 | TCATTGATCATGCTT GTGG TGCT CTAC TTTTTTGTGGCCTGG Swoo_0711 974250 - 976025 + | cysteine ABC transporter permease/ATP-binding protein TERM 878 976071 - 976040 - T 83 -11.7 -3.08798 | opp_overlap 976040 976033 AGGCTTTAGCTAATA GGCTACCTAGACT CGGTTT AGTTTAGGTAGCC TTAATGCTTCTTATC TERM 879 976040 - 976071 + T 100 -13.9 -3.34242 | opp_overlap 976040, overlap 976033 AGGCTTTAGCTAATA GGCTACCTAGACT CGGTTT AGTTTAGGTAGCC TTAATGCTTCTTATC Swoo_0712 977968 - 976085 - | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 880 976668 - 976683 + g 82 -7.6 -4.6902 | TGAGTGGAGAGCTGG GCAATG GAGT CATTGC TTTTTGAGATTATAG TERM 881 978106 - 978130 + r 72 -7.1 -3.96624 | overlap 978108 978109 CTTCTATTTGTTTGG GAGGGGGAAGA GTG TCTTCCCCATA TTTGTGATCAACCTA TERM 882 978108 - 978128 + r 80 -9.7 -3.57406 | overlap 978106 978109 TCTATTTGTTTGGGA GGGGGAAGA GTG TCTTCCCCA TATTTGTGATCAACC TERM 883 978109 - 978127 + r 93 -13.2 -2.74122 | overlap 978108 978106 CTATTTGTTTGGGAG GGGGAAGA GTG TCTTCCCC ATATTTGTGATCAAC Swoo_0713 978314 - 978138 - | hypothetical protein TERM 884 978409 - 978438 + r 86 -8 -4.96848 | opp_overlap 978415, overlap 978415 AGGAAATTGTCCATA AAAAAACCAGAC ACATAG GTCTGGTTTTTA TTTTTGTATCAGCAA TERM 885 978415 - 978432 + r 100 -7 -5.71295 | opp_overlap 978415, overlap 978409 TTGTCCATAAAAAAA CCAGAC ACATAG GTCTGG TTTTTATTTTTGTAT TERM 886 978432 - 978415 - R 93 -7 -5.60993 | opp_overlap 978415 978409 TTGTCCATAAAAAAA CCAGAC ACATAG GTCTGG TTTTTATTTTTGTAT Swoo_0714 981638 - 978459 - | delta-1-pyrroline-5-carboxylate dehydrogenase TERM 887 978494 - 978516 + g 79 -9.9 -3.72324 | GAGAGAGTAGAGTTG CATTACCGC CAATC GCGGTGATG TTATTGGTGCGAGTC TERM 888 979816 - 979804 - G 82 -10.5 -4.10161 | overlap 979794 CACCAGCTGCTAAAA GCGCC ATC GGCGC CAGAGAGTGCTTGCT TERM 889 981896 - 981938 + r 100 -14.4 -3.9243 | opp_overlap 981897 981907, overlap 981898 981907 GGGCTTTGCTAATTT AGAAACAAAAAGCCAGCATT TTA AATGCTGGCTTTTTGTTGTG TTATTTAGGAGGTTA TERM 890 981937 - 981897 - R 100 -15.7 -2.52464 | opp_overlap 981896 981898 981907, overlap 981907 GGCTTTGCTAATTTA GAAACAAAAAGCCAGCATT TTA AATGCTGGCTTTTTGTTGT GTTATTTAGGAGGTT TERM 891 981898 - 981936 + r 100 -19.2 -3.54755 | opp_overlap 981897 981907, overlap 981896 981907 GCTTTGCTAATTTAG AAACAAAAAGCCAGCATT TTA AATGCTGGCTTTTTGTTG TGTTATTTAGGAGGT TERM 892 981927 - 981907 - R 100 -14.1 -5.38958 | opp_overlap 981907 981898 981896, overlap 981897 ATTTAGAAACAAAAA GCCAGCATT TTA AATGCTGGC TTTTTGTTGTGTTAT TERM 893 981907 - 981927 + r 100 -14.1 -5.31072 | opp_overlap 981897 981907, overlap 981898 981896 ATTTAGAAACAAAAA GCCAGCATT TTA AATGCTGGC TTTTTGTTGTGTTAT Swoo_0715 982537 - 981962 - | SH3 type 3 domain-containing protein TERM 894 982697 - 982680 - R 100 -7.7 -5.74086 | opp_overlap 982675 982680 AAAGTAAACAAAAAA GGGAAAC CATC GCTTCCC TTTTAATTATTATCT TERM 895 982680 - 982697 + r 72 -5.5 -4.60317 | opp_overlap 982680, overlap 982675 AAAGTAAACAAAAAA GGGAAAC CATC GCTTCCC TTTTAATTATTATCT Swoo_0716 984000 - 982732 - | phosphate transporter TERM 896 983849 - 983835 - G 73 -4.3 -4.82855 | opp_overlap 983835 983840, overlap 983839 CAGCAAATTCAAAAA TCATC GCGAT GATGA TCGCTTGTTTAATCG TERM 897 983840 - 983853 + g 70 -6.7 -4.03141 | opp_overlap 983835 983839, overlap 983835 AATTCAAAAATCATC GCGAT GATG ATCGC TTGTTTAATCGTAAT Swoo_0717 984705 - 984025 - | hypothetical protein TERM 898 984731 - 984786 + H 71 -3.1 -5.15969 | opp_overlap 984745, overlap 984744 CTATTTAGGTTATTC CACTGTTGGAAAAAGCGGGCGCATG TTAACC CAAGCGACCGCGTATTGAAACTGTG TTTTTTAAATTAAAA TERM 899 984772 - 984745 - H 86 -8.3 -4.57569 | opp_overlap 984744 984731 CCACTGTTGGAAAAA GCGGGCGCATG TTAACC CAAGCGACCGC GTATTGAAACTGTGT Swoo_0718 984994 - 986496 + | adenylate cyclase TERM 900 986503 - 986541 + T 74 -9 -3.5393 | opp_overlap 986507, overlap 986507 986513 TGGCGCTAATCAACT AAAAGCTAAACGATAGGG CTT CTTTATCGTTTAGCTTGA TTTACCAGAGCTACT TERM 901 986537 - 986507 - T 89 -9.8 -4.4959 | opp_overlap 986503 986507 986513 GCTAATCAACTAAAA GCTAAACGATAGGG CTT CTTTATCGTTTAGC TTGATTTACCAGAGC TERM 902 986507 - 986537 + T 100 -14.2 -3.51232 | opp_overlap 986507, overlap 986503 986513 GCTAATCAACTAAAA GCTAAACGATAGGG CTT CTTTATCGTTTAGC TTGATTTACCAGAGC Swoo_0719 987345 - 986533 - | Ion transport 2 domain-containing protein Swoo_0720 987724 - 987392 - | hypothetical protein TERM 903 987660 - 987673 + g 77 -4.5 -5.1417 | opp_overlap 987650, overlap 987651 TCGAATGCTACTTGT GTAGC TTTA GCTGC TTTTTGGTTTTGTAA TERM 904 987793 - 987758 - R 70 -7.6 -3.60971 | opp_overlap 987762 987766, overlap 987759 ACTCTAATCTTGAAA CTGAGGTTCCTAGGAC CTAG GTTCTAGGAACACCAA AGTTTACTTTCCTGG Swoo_0721 988450 - 987797 - | hypothetical protein TERM 905 988467 - 988506 + r 76 -8.8 -3.84996 | gap 1, opp_overlap 988470 988472, overlap 988469 988472 ATCGACTCCTTACAA AAAG-AGCGCTTTTCTTAA AAA TTAAGAAAAGCGCTTCATC TTTAGCTTGTATATT TERM 906 988469 - 988504 + r 85 -11.4 -3.49837 | gap 1, opp_overlap 988470 988472, overlap 988467 988472 CGACTCCTTACAAAA AG-AGCGCTTTTCTTAA AAA TTAAGAAAAGCGCTTCA TCTTTAGCTTGTATA TERM 907 988502 - 988470 - R 100 -15.1 -4.83615 | opp_overlap 988469 988467 988472, overlap 988472 GACTCCTTACAAAAA GAGCGCTTTTCTTAA AAA TTAAGAAAAGCGCTT CATCTTTAGCTTGTA TERM 908 988500 - 988472 - R 100 -17.7 -4.03995 | opp_overlap 988469 988467 988472, overlap 988470 CTCCTTACAAAAAGA GCGCTTTTCTTAA AAA TTAAGAAAAGCGC TTCATCTTTAGCTTG TERM 909 988472 - 988500 + r 100 -17.7 -3.481 | opp_overlap 988472 988470, overlap 988469 988467 CTCCTTACAAAAAGA GCGCTTTTCTTAA AAA TTAAGAAAAGCGC TTCATCTTTAGCTTG Swoo_0722 989256 - 988570 - | phage shock protein A, PspA TERM 910 988732 - 988749 + g 70 -5.5 -4.37711 | overlap 988743 988745 CTGCTGACGAGCCTT GATACGC TCCA GCGAATC TTTTGCGTTTAATAG Swoo_0723 989740 - 989327 - | hypothetical protein Swoo_0724 991598 - 989868 - | spermidine synthase TERM 911 990030 - 990046 + g 72 -7.3 -4.0825 | GGTTAACCAGTCATC CTCAACT GAT AGTTGGG TTATTTCGTTCAACC TERM 912 991669 - 991635 - R 100 -15.8 -4.39166 | opp_overlap 991633 991664 TTGCAGATAGTAAAA TGGGCGACTACCCCCA AAT TATGGATAGTCGCCCA AGGTGTTCAATCTTA Swoo_0725 992589 - 991690 - | hypothetical protein Swoo_0726 993562 - 992603 - | hypothetical protein TERM 913 996607 - 996597 - g 71 -4.6 -4.66987 | opp_overlap 996597 996601 GACATTGCAACAAAA GCCC GGT GAGC TACCTTTAGACTTGG Swoo_0727 993814 - 996678 + | (glutamate--ammonia-ligase) adenylyltransferase TERM 914 996761 - 996771 + F 76 -4 -5.32599 | opp_overlap 996748 TATAACGCTTCGCAT TATG CGG CATA TTTTTGTCTTTTATA Swoo_0728 996886 - 997620 + | hypothetical protein Swoo_0729 997736 - 998116 + | hypothetical protein Swoo_0730 998259 - 998984 + | hypothetical protein Swoo_0731 999875 - 999060 - | hypothetical protein TERM 915 999356 - 999345 - G 70 -7.2 -3.91144 | opp_overlap 999345 TGCAGATTGCAGAAA GGGG AAGG CCCC TTGGTAAGGTGTGCC TERM 916 999973 - 999943 - R 70 -7.6 -3.66883 | overlap 999944 GTAAGAGAGGTCAAA GTGCTATCTACAAC TTA GTTGCAGATAGCTG TCACAAGGCTTGGAA TERM 917 999972 - 999944 - R 78 -11.1 -2.79648 | overlap 999943 TAAGAGAGGTCAAAG TGCTATCTACAAC TTA GTTGCAGATAGCT GTCACAAGGCTTGGA Swoo_0732 1001676 - 1000009 - | methyl-accepting chemotaxis sensory transducer TERM 918 1001917 - 1001938 + r 73 -9.5 -2.9627 | opp_overlap 1001917, overlap 1001919 1001921 TCTCGGCGAGGAAAA TAGAGGGTA AGAA TGCCCTCTA TGTGTAATCGGTTAC TERM 919 1001938 - 1001917 - R 76 -7.3 -4.25104 | opp_overlap 1001917 1001919 1001921 TCTCGGCGAGGAAAA TAGAGGGTA AGAA TGCCCTCTA TGTGTAATCGGTTAC Swoo_0733 1004193 - 1001950 - | hypothetical protein TERM 920 1002740 - 1002756 + g 76 -3 -5.31545 | gap 1, opp_overlap 1002740 1002741, overlap 1002741 AACCTCATGCCAAAA G-GAGTG ATAG CACTCTC TTTTTTCATCTTATT TERM 921 1002741 - 1002754 + g 72 -6.7 -4.26398 | opp_overlap 1002741 1002740, overlap 1002740 ACCTCATGCCAAAAG GAGTG ATAG CACTC TCTTTTTTCATCTTA Swoo_0734 1005535 - 1004408 - | AFG1 family ATPase Swoo_0735 1005696 - 1006721 + | hypothetical protein TERM 922 1006782 - 1006819 + T 100 -13.7 -3.8646 | gap 1, opp_overlap 1006780, overlap 1006785 CTATTGTCTAAGAGC TT-AGGGAGAGGTTAACT TTC GGTTAGCCTCTCCCTTAA TTTAGCTTATTGCTG TERM 923 1006785 - 1006815 + T 100 -17 -3.58779 | opp_overlap 1006780, overlap 1006782 TTGTCTAAGAGCTTA GGGAGAGGTTAACT TTC GGTTAGCCTCTCCC TTAATTTAGCTTATT Swoo_0736 1008319 - 1006826 - | OmpA/MotB domain-containing protein TERM 924 1006959 - 1006984 + g 74 -6.9 -4.40993 | TTAGGGATTTGATGT GCAGTTGTAAG CTGC TTTACAACCGC TTTTGCTCGTTTATC TERM 925 1007172 - 1007187 + g 78 -6.1 -4.60797 | CCATCGAGCGCTACA TGGCC TGTTTC GGCCA TTTTGTCTGTCAGGC TERM 926 1008302 - 1008286 - G 95 -10.8 -4.8667 | GAGACTCCACAAAAA GGGGGC TTTTT GCCCCC GTTAAAAATTTAATC Swoo_0737 1010196 - 1008319 - | hypothetical protein Swoo_0738 1011790 - 1010288 - | hypothetical protein TERM 927 1011909 - 1011924 + r 78 -10.4 -3.1478 | overlap 1011907 GCATTAACGACATTC CCGCCA TCCA TGGCGG TCTTCATGAAATAGT Swoo_0739 1012754 - 1012293 - | hypothetical protein Swoo_0740 1013419 - 1012757 - | hypothetical protein Swoo_0741 1013878 - 1013459 - | hypothetical protein TERM 928 1013505 - 1013528 + g 76 -8.2 -4.18494 | opp_overlap 1013505 1013504 GGAGTTTTAATAAAT TTACAGCTCA TGGT TGAGCGGTAA TTTTCACTGAGAATG Swoo_0742 1017998 - 1013931 - | cell surface receptor IPT/TIG domain-containing protein TERM 929 1015344 - 1015328 - G 71 -5.1 -4.48175 | opp_overlap 1015330, overlap 1015330 AAAACTTAAGTAAAA TACCATC TAT GATGGTT CTTATTGCTATGCTC TERM 930 1015342 - 1015330 - G 71 -7.7 -3.82923 | opp_overlap 1015330, overlap 1015328 AACTTAAGTAAAATA CCATC TAT GATGG TTCTTATTGCTATGC TERM 931 1015330 - 1015342 + g 74 -7.7 -4.0156 | opp_overlap 1015330 1015328 AACTTAAGTAAAATA CCATC TAT GATGG TTCTTATTGCTATGC TERM 932 1016310 - 1016332 + g 90 -9.2 -4.8622 | opp_overlap 1016304 GGCATCAAGCTCATA TTGAGAACCT AGT AGGGTCTCAA TTTTTAGTTCGCCAG Swoo_0743 1018776 - 1018075 - | hypothetical protein Swoo_0744 1019267 - 1018773 - | TPR repeat-containing protein Swoo_0745 1019599 - 1019255 - | hypothetical protein TERM 933 1019386 - 1019396 + g 71 -4 -4.87626 | GGTTTGAAGTGATCT TAAG CAC CTTA TTTTTACTATTGAGG Swoo_0746 1020464 - 1019601 - | type II secretion system protein TERM 934 1019699 - 1019687 - G 85 -7.7 -4.63527 | CGATGAGGGGAAAAA CCAGT TTA ACTGG CGCTTCTAGGGCTTT Swoo_0747 1021324 - 1020473 - | type II secretion system protein TERM 935 1021186 - 1021197 + g 71 -4.4 -4.59773 | opp_overlap 1021178 1021186 TAAAAAGGAACATAT CGAA CAGG TTCG TTTTTGCCGATGAAG TERM 936 1021303 - 1021293 - G 87 -5.4 -5.44119 | GCTACGGCAAAAAAA GCAA ATA TTGC GGAGAATACGGCACT Swoo_0748 1023035 - 1021317 - | FHA domain-containing protein TERM 937 1021410 - 1021392 - G 84 -8.8 -4.3739 | opp_overlap 1021402, overlap 1021394 TAGCTGCTCATAAAA CTCAGGCA TAG TGCCTGTG GCAGTGTAGTAACCT TERM 938 1021408 - 1021394 - G 70 -10 -2.52946 | opp_overlap 1021402, overlap 1021392 GCTGCTCATAAAACT CAGGCA TAG TGCCTG TGGCAGTGTAGTAAC TERM 939 1022820 - 1022801 - G 73 -10 -2.9914 | gap 1, opp_overlap 1022801 TATCTGTCATAGAGA GCGGG-CCA TAT TGGTCCCGC TTCTCATCATTGACT TERM 940 1022801 - 1022820 + g 77 -10 -3.47494 | gap 1, opp_overlap 1022801 TATCTGTCATAGAGA GCGGG-CCA TAT TGGTCCCGC TTCTCATCATTGACT Swoo_0749 1024355 - 1023045 - | type II and III secretion system protein TERM 941 1023587 - 1023597 + g 82 -8.2 -4.46212 | overlap 1023585 GTTCAGCCAGCATGC GGGC ATC GCCC TTTTCTGATAGCAGC Swoo_0750 1025248 - 1024352 - | Flp pilus assembly protein CpaB Swoo_0751 1025450 - 1025262 - | hypothetical protein TERM 942 1025395 - 1025375 - G 71 -9.6 -3.02144 | CTATTGGTGTTAACA GGGCGGCG ACTAA CGCCGCAC ATACAACTAAGTACT Swoo_0752 1026127 - 1025453 - | hypothetical protein Swoo_0753 1027006 - 1026131 - | hypothetical protein Swoo_0754 1028403 - 1027006 - | hypothetical protein TERM 943 1028346 - 1028331 - G 77 -4.7 -5.1166 | CATTAAAACTAAAAA GCACT ACCATA AGTGC AAAAGACATAAGAAT Swoo_0755 1028784 - 1028494 - | hypothetical protein TERM 944 1028817 - 1028855 + r 78 -11.2 -2.60988 | opp_overlap 1028816 1028814 1028819, overlap 1028822 1028846 ACTAACGAGTAATAT CATGAGTTAGCAGAGG GAGGGGG CTTCTGCTAACTCATC TCAGTTAGTTGCCTT TERM 945 1028853 - 1028819 - R 81 -11.6 -2.79209 | opp_overlap 1028817 1028822 1028846, overlap 1028816 1028814 TAACGAGTAATATCA TGAGTTAGCAGAGG GAGGGGG CTTCTGCTAACTCA TCTCAGTTAGTTGCC TERM 946 1028822 - 1028850 + r 74 -9.7 -2.67477 | opp_overlap 1028819 1028816 1028814, overlap 1028817 1028846 CGAGTAATATCATGA GTTAGCAGAGG GAGGGGG CTTCTGCTAAC TCATCTCAGTTAGTT Swoo_0756 1029123 - 1028860 - | hypothetical protein Swoo_0757 1029874 - 1029242 - | LuxR family transcriptional regulator TERM 947 1030196 - 1030171 - R 77 -6.3 -4.84359 | opp_overlap 1030171 1030194 CGATGTTTATAAAAA TGGAAATATAA CCTG CTATATTCCCA TAGTTATTTTATGGT Swoo_0758 1031716 - 1030205 - | peptidase M16 domain-containing protein Swoo_0759 1033164 - 1031713 - | peptidase M16 domain-containing protein Swoo_0760 1034808 - 1033231 - | putative phytochrome sensor protein TERM 948 1034952 - 1034922 - R 87 -12 -3.05816 | GGATTTTTGATTGAA GCTGCTTAAGGA GTCTAGT CCCTTAAGCAGC GAGTGATGTTAAAGG Swoo_0761 1037249 - 1034961 - | putative nitric oxide reductase (subunit B) transmembrane protein Swoo_0762 1037768 - 1039498 + | sodium/hydrogen exchanger TERM 949 1039944 - 1039975 + G 100 -13.8 -3.40403 | opp_overlap 1039951 CTAGAACCAGTTTAG TGAGAGAGGGCGAT AAGT ACCGCTCTCTCTCA TTGTCATGCCCGGAA Swoo_0763 1039616 - 1040800 + | flagellar biosynthesis protein, putative Swoo_0764 1042423 - 1041200 - | ankyrin Swoo_0765 1043158 - 1042871 - | hypothetical protein Swoo_0766 1044169 - 1043525 - | hypothetical protein TERM 950 1044125 - 1044104 - G 79 -2.9 -5.33985 | overlap 1044105 TCCAAAAAAAACAAA CGCTGCTAT ATAA ATAGCGGCT TCAAAAAGTGCGGCA TERM 951 1044396 - 1044416 + r 71 -8.2 -3.53012 | opp_overlap 1044395 1044394 1044410 AAATAATTATGAAGG GGCTGCCT TTAAC AGGCTGCC TTTAACAGCCGACCC Swoo_0767 1045658 - 1044486 - | MerR family transcriptional regulator TERM 952 1046537 - 1046553 + r 73 -9.5 -3.01712 | opp_overlap 1046531 CCAAAACAGGGTGAG GTTTCAC GGA GTGAAAC TCTTCGAGCGAGAGA Swoo_0768 1047768 - 1046845 - | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase TERM 953 1047607 - 1047619 + g 93 -9.1 -5.14965 | opp_overlap 1047603 1047605 GGCGGTATGAACACG GCTGC CGA GCAGC TTTTTTGCTAAACGT Swoo_0769 1047916 - 1049355 + | rfaE bifunctional protein TERM 954 1049541 - 1049574 + G 70 -6.1 -4.2828 | CGTGGCGCCATGGTG TTGCCCCTGCA AGATACCGACAC TGCAGGGGTAA TTTTACTGGATCGGG Swoo_0770 1049352 - 1050203 + | hypothetical protein Swoo_0771 1050337 - 1050891 + | TetR family transcriptional regulator Swoo_0772 1051134 - 1050868 - | hypothetical protein TERM 955 1050951 - 1050962 + g 71 -2.2 -5.1675 | GCTTATCATCTTGTC TAGC AACC GCTG TTTTTTCATGGCTAG TERM 956 1051160 - 1051170 + H 72 -5.4 -4.66987 | CTGCTAAATAATTTT GCAA AAC TTGC TTTTGTTGCACTATA TERM 957 1051535 - 1051549 + G 71 -2.1 -5.03945 | overlap 1051536 TGATTAAGTCGAGCT TTTGG ATAAG CCAAG TTTTTATGATTATTG Swoo_0773 1051447 - 1052034 + | hypothetical protein Swoo_0774 1052047 - 1053129 + | rhomboid family protein TERM 958 1053158 - 1053185 + T 86 -11.4 -3.72078 | opp_overlap 1053164, overlap 1053164 ACTGTAAACGTATTT AAAAAAGGCTGC AGTT GCAGCCTTTTTA TTGCTTATTTTATGG TERM 959 1053179 - 1053164 - T 93 -10.4 -5.10497 | opp_overlap 1053164 1053158 AACGTATTTAAAAAA GGCTGC AGTT GCAGCC TTTTTATTGCTTATT TERM 960 1053164 - 1053179 + T 100 -10.4 -5.23396 | opp_overlap 1053164, overlap 1053158 AACGTATTTAAAAAA GGCTGC AGTT GCAGCC TTTTTATTGCTTATT Swoo_0775 1054577 - 1053213 - | MltA-interacting MipA family protein TERM 961 1054657 - 1054642 - H 74 -4.8 -4.91473 | TAAGTTAAAAATAAA TTTATC AGGA GATAAA CATCTTAACGATAAG TERM 962 1054769 - 1054787 + H 100 -4.5 -6.11392 | GCTTAACGGTTAGTT GGTAGAG GTCTG CTCTTCC TTTTTTTGTTTATTT TERM 963 1055037 - 1055020 - g 70 -9.9 -2.973 | overlap 1055019 1055022 GTAGAAAAGTTAAAG CAGCTCA CTTC TGAGCTG AGTGCCGTTCAACTG Swoo_0776 1054954 - 1056738 + | sulfite reductase (NADPH) flavoprotein, alpha chain TERM 964 1056802 - 1056778 - f 75 -7.9 -4.09459 | gap 1, overlap 1056780 GTAAAAATTGATAAA GATGCAGCGC CATGAT GCGCTGCA-C AGTAAAGAATTGAGT TERM 965 1056801 - 1056780 - g 87 -11.6 -3.62505 | overlap 1056778 AAAAATTGATAAAGA TGCAGCGC CATGAT GCGCTGCA CAGTAAAGAATTGAG Swoo_0777 1056779 - 1058563 + | sulfite reductase (NADPH) hemoprotein, beta-component Swoo_0778 1058541 - 1059323 + | phosphoadenosine phosphosulfate reductase TERM 966 1059696 - 1059714 + F 71 -9.6 -2.71246 | opp_overlap 1059692, overlap 1059692 1059692 AGCAAATATAGCCAT GCTTATCG TAT CGATAGGC TGAGTTTGATTGGCT TERM 967 1059977 - 1059954 - f 91 -11.2 -4.72272 | TGTCTTTAGGAAAAA GCTAAAATCT ACAT AGATTTTAGC TATCAAAATTTAAAT TERM 968 1060113 - 1060131 + G 71 -2.3 -5.05782 | CTTATTCTCGCTTCA GTGCCGT CCGAT ACGCCGC TTTTTTCCGCTCAAT Swoo_0779 1060005 - 1061735 + | hypothetical protein TERM 969 1061753 - 1061771 + F 100 -14.6 -6.06723 | overlap 1061768 CTAAATTTGATAGTT GAGCCAGC TAA GCTGGCTC TTTTTTTTTAAGGGG Swoo_0780 1061797 - 1062210 + | hypothetical protein Swoo_0781 1062336 - 1063190 + | protein of unknown function RIO1 TERM 970 1063196 - 1063227 + T 75 -10.2 -2.89921 | opp_overlap 1063192 1063197 1063199 1063216, overlap 1063184 1063199 TGAAGGCTAAATTTA ACAGGTTCTAGCTC CAAA GAGCTAGAACCTCA TATCTAGCCGTTAGT TERM 971 1063226 - 1063197 - T 100 -13.7 -3.29211 | opp_overlap 1063196 1063184 1063199, overlap 1063192 1063199 1063216 GAAGGCTAAATTTAA CAGGTTCTAGCTC CAAA GAGCTAGAACCTC ATATCTAGCCGTTAG TERM 972 1063224 - 1063199 - T 100 -16.3 -3.20617 | opp_overlap 1063196 1063184 1063199, overlap 1063197 1063192 1063216 AGGCTAAATTTAACA GGTTCTAGCTC CAAA GAGCTAGAACC TCATATCTAGCCGTT TERM 973 1063199 - 1063224 + T 100 -16.3 -2.69647 | opp_overlap 1063199 1063197 1063192 1063216, overlap 1063196 1063184 AGGCTAAATTTAACA GGTTCTAGCTC CAAA GAGCTAGAACC TCATATCTAGCCGTT TERM 974 1063234 - 1063256 + T 86 -8.4 -4.61868 | opp_overlap 1063216, overlap 1063184 AGAACCTCATATCTA GCCGTTAGTC TGT GGCTAACTGC TTTTCTCTATCCCTA Swoo_0782 1063776 - 1063249 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 975 1063303 - 1063315 + g 71 -9.1 -3.39353 | CGCAATATCCTCTGC TGCCG TTT CGGCA TTGATATCTTCATCT Swoo_0783 1064206 - 1063832 - | hypothetical protein Swoo_0784 1064634 - 1064287 - | hypothetical protein Swoo_0785 1066428 - 1064971 - | peptidase S41 TERM 976 1065387 - 1065411 + g 71 -4.3 -4.60797 | overlap 1065388 1065393 GTTGGCTAAAATTAT CTGAATCTTGA GTT TCAAGTTTCAC TTTTATCTCTGACAG Swoo_0786 1067693 - 1066698 - | phospholipase A(2) TERM 977 1068240 - 1068260 + G 74 -5.5 -4.60487 | opp_overlap 1068245, overlap 1068246 AAAATGTGGTGCGTT TAAAGGG AGGCGAC CCCTTTA TTTTTGGCCGTGGTG Swoo_0787 1067954 - 1068775 + | uroporphyrin-III C-methyltransferase Swoo_0788 1069620 - 1068787 - | hypothetical protein Swoo_0789 1070899 - 1069712 - | major facilitator transporter Swoo_0790 1071102 - 1072487 + | hypothetical protein Swoo_0791 1072616 - 1073761 + | putative lipoprotein TERM 978 1073757 - 1073781 + F 70 -7.3 -3.73224 | opp_overlap 1073757, overlap 1073763 TGAGTAAGTGGAAAG TTTAAGCCTTA AGT TGAGGTTTAAA TTTGATGGAGGCTGA TERM 979 1073787 - 1073808 + F 90 -10.9 -4.50159 | opp_overlap 1073783 GAGGTTTAAATTTGA TGGAGGCTG AGGA TAGCCTCCA TTTATTTGACTTAAA Swoo_0792 1073896 - 1075545 + | hypothetical protein TERM 980 1075575 - 1075611 + F 100 -19 -4.72272 | opp_overlap 1075580, overlap 1075580 1075608 CTAAGTCTTAATCGT GAAAATGGCCACTCAG CTCAA TTGAGTGGCCATTTTC TTTTTACTAAAGAAA TERM 981 1075580 - 1075606 + F 100 -13.1 -5.3104 | opp_overlap 1075580, overlap 1075575 TCTTAATCGTGAAAA TGGCCACTCAG CTCAA TTGAGTGGCCA TTTTCTTTTTACTAA TERM 982 1075606 - 1075580 - f 95 -12.4 -4.14392 | opp_overlap 1075580 1075575 TCTTAATCGTGAAAA TGGCCACTCA GCTCAAT TGAGTGGCCA TTTTCTTTTTACTAA Swoo_0793 1075748 - 1076269 + | protoporphyrinogen oxidase Swoo_0794 1076285 - 1076821 + | hypothetical protein Swoo_0795 1076862 - 1077926 + | glycosyl transferase group 1 TERM 983 1077931 - 1077916 - T 91 -10.4 -4.85129 | opp_overlap 1077916 AGCATAGAGCAAAAA GGCTCC AGTA GGAGCC TTATATACCCAATCG TERM 984 1077916 - 1077931 + T 81 -10.4 -3.48924 | opp_overlap 1077916 AGCATAGAGCAAAAA GGCTCC AGTA GGAGCC TTATATACCCAATCG Swoo_0796 1078621 - 1077950 - | DSBA oxidoreductase TERM 985 1078490 - 1078478 - G 70 -6.3 -4.25104 | opp_overlap 1078477 1078487 GTTGTGGCAGTAAAA TGAGT AGA ACTCA GTCAATTTAGGTTGA Swoo_0797 1079456 - 1078797 - | heat shock protein DnaJ domain-containing protein TERM 986 1079760 - 1079783 + H 75 -8.3 -3.71873 | AGCTCTGTCTATTGA TGCAATATC TCGGAT GATATTGCA TTTCCCTGTCGATGA TERM 987 1079914 - 1079928 + G 70 -2.8 -4.92783 | GTAATAGTAAATGAT GCCT GTTTATA AGGC TTTTTCTCGTCGATT TERM 988 1080773 - 1080747 - g 74 -2.3 -5.27923 | overlap 1080764 GAAGTCTACAAAAAA GTTTTAGCTAT AGCAG ATCGCTTAAAC GAATAGGTGGTCGGC Swoo_0798 1079909 - 1081561 + | diguanylate cyclase TERM 989 1082107 - 1082087 - g 79 -9.7 -3.73224 | opp_overlap 1082075, overlap 1082075 TGACCTCTGATCAAA GAGAGGCTT TTG AAGCCGCTC AACGTAGGGAGAGTC Swoo_0799 1081765 - 1083381 + | diguanylate cyclase Swoo_0800 1084649 - 1083378 - | hypothetical protein TERM 990 1085073 - 1085055 - g 87 -5.3 -5.42259 | opp_overlap 1085055, overlap 1085057 GCAGTGGCAAAAAAA GCTAGCT TGGAT AACTAGC TACCTTAATGAACAC Swoo_0801 1084915 - 1085982 + | endonuclease/exonuclease/phosphatase TERM 991 1086097 - 1086113 + G 71 -3.7 -4.85129 | opp_overlap 1086097 TAAGTCGTGATGAGA TTGAAGA GTA TCGTCAA TTTTTACTCTGTCCT Swoo_0802 1086012 - 1086902 + | hypothetical protein Swoo_0803 1087269 - 1087478 + | hypothetical protein Swoo_0804 1087743 - 1088231 + | hypothetical protein TERM 992 1088262 - 1088279 + F 73 -2.7 -5.28778 | TCTATCTTCTATTAT GTGAC AAATAAAA GTCAC TTTTTTCTAGGTCAT Swoo_0805 1088348 - 1089352 + | hypothetical protein Swoo_0806 1089360 - 1090688 + | diguanylate cyclase TERM 993 1090673 - 1090690 + T 72 -4.9 -4.69326 | opp_overlap 1090675, overlap 1090675 TAGGCGATTTTCAAT TACTAAG TTAG CTTAGTG TTTTATCTTGAGTGT Swoo_0807 1090995 - 1090750 - | hypothetical protein TERM 994 1090837 - 1090811 - G 86 -7.3 -5.06816 | gap 1, opp_overlap 1090811 1090812, overlap 1090812 AGCTGCCAAGAAAAA GGGGCAT-CGCC CTTT AGCATATGCCCC TTCTGTTTACGTTTG TERM 995 1091263 - 1091277 + H 77 -6.4 -4.56636 | TATTGAGTCTAACTT TAGCTC TTT GGGCTA TTTTCCTTACTTTTT TERM 996 1091656 - 1091645 - g 72 -5.8 -4.56367 | GATGCGATAAATAAA GCCA ATGC TGGC GCCTTTACTGCCGAG Swoo_0808 1091435 - 1093060 + | methyl-accepting chemotaxis sensory transducer Swoo_0809 1093840 - 1093127 - | hypothetical protein Swoo_0810 1094774 - 1093908 - | short-chain dehydrogenase/reductase SDR Swoo_0811 1095716 - 1094826 - | LysR family transcriptional regulator Swoo_0812 1095880 - 1096269 + | endoribonuclease L-PSP Swoo_0813 1096310 - 1097758 + | aldehyde dehydrogenase Swoo_0814 1097768 - 1098751 + | peptidase M19 renal dipeptidase TERM 997 1098780 - 1098757 - f 79 -4.6 -5.25154 | opp_overlap 1098758 1098759, overlap 1098758 1098759 AAAAAAATAACAAAA CCGAATGATG TCAA CATCATTCAT ATTATTTAAGAGCGT TERM 998 1098779 - 1098758 - f 73 -8.1 -3.69602 | opp_overlap 1098758 1098759, overlap 1098757 1098759 AAAAAATAACAAAAC CGAATGATG TCAA CATCATTCA TATTATTTAAGAGCG TERM 999 1098778 - 1098759 - f 72 -9.4 -2.78101 | opp_overlap 1098758 1098759, overlap 1098758 1098757 AAAAATAACAAAACC GAATGATG TCAA CATCATTC ATATTATTTAAGAGC TERM 1000 1098759 - 1098778 + F 71 -9.4 -2.72371 | opp_overlap 1098759 1098758 1098757, overlap 1098758 AAAAATAACAAAACC GAATGATG TCAA CATCATTC ATATTATTTAAGAGC Swoo_0815 1098845 - 1100437 + | BCCT transporter TERM 1001 1100467 - 1100446 - f 79 -10.2 -3.50047 | opp_overlap 1100446 1100445, overlap 1100439 TCTATAAACCGATAA GGTGCAGT GAGTTT ACTGCACC ATTTCCAGTTGAAAG TERM 1002 1100446 - 1100467 + F 78 -10.9 -2.79492 | opp_overlap 1100439 1100446, overlap 1100445 TCTATAAACCGATAA GGTGCAGTG AGTT TACTGCACC ATTTCCAGTTGAAAG TERM 1003 1101438 - 1101424 - g 73 -10 -3.03007 | opp_overlap 1101426, overlap 1101411 1101426 AACAGGGCGCGAACA CACCTG CAG CAGGTG GTTACCATAGATGAA Swoo_0816 1100491 - 1102209 + | hypothetical protein Swoo_0817 1102233 - 1102946 + | hypothetical protein Swoo_0818 1103213 - 1104283 + | porin TERM 1004 1104376 - 1104401 + T 84 -7.5 -4.77983 | opp_overlap 1104361 CCTTGGCAGTTCGAA GGTGCCCGAGA TGGT TTATGGGCACC TTTTCTTACTCTATT Swoo_0819 1105650 - 1104415 - | major facilitator transporter TERM 1005 1105406 - 1105393 - G 71 -3.9 -4.88228 | AGTTAACAGTAAAAA TAATG AGAT CATTA GGGCGTGTTCTAGCC TERM 1006 1105831 - 1105812 - g 82 -7.2 -4.60041 | gap 1, opp_overlap 1105803 AGCTATCCGCAAAAA GTGG-TCTC GTT GAGAGCCAC TGGAGGAGATCATGA Swoo_0820 1105755 - 1106540 + | AraC family transcriptional regulator Swoo_0821 1108234 - 1106609 - | EAL domain-containing protein TERM 1007 1108200 - 1108188 - G 75 -9.1 -3.56972 | opp_overlap 1108185, overlap 1108184 AGGGTATGAAACCAA GGTGC TTT GCACC AAGATGTTTGATGTG TERM 1008 1108481 - 1108492 + H 70 -5.8 -4.25283 | TAAGCTGTACTCTTT GAGG CGAT CCTC TTTTGCTAGAGGGCT TERM 1009 1108534 - 1108547 + H 79 -3.9 -5.37345 | overlap 1108544 TTTAAACACTGCTAT TTTCA GAGG TGAAA TTTTTTCTGATTAAA Swoo_0822 1108636 - 1109136 + | peptide methionine sulfoxide reductase TERM 1010 1109190 - 1109170 - f 89 -12.6 -2.67803 | opp_overlap 1109170, overlap 1109167 1109166 TTTTTACTAAACTTA GGGCCAGT CATAT ACTGGCCC TTTCTTTTGGCGACT TERM 1011 1109170 - 1109190 + F 100 -12.6 -4.65263 | opp_overlap 1109170 1109167 1109166 TTTTTACTAAACTTA GGGCCAGT CATAT ACTGGCCC TTTCTTTTGGCGACT Swoo_0823 1109251 - 1110732 + | hypothetical protein Swoo_0824 1110905 - 1111252 + | DGPFAETKE family protein Swoo_0825 1111283 - 1112551 + | RNA polymerase ECF-subfamily sigma factor Swoo_0826 1112586 - 1113098 + | methionine sulfoxide reductase A TERM 1012 1114096 - 1114112 + G 73 -2.9 -5.14563 | overlap 1114088 TTGATATCGAGAAGC TTCGTCT GTT GGTCGAA TTTTTTGCTAAAAAA Swoo_0827 1113234 - 1115012 + | glutamate decarboxylase Swoo_0828 1116051 - 1115077 - | response regulator receiver modulated diguanylate cyclase Swoo_0829 1119790 - 1116068 - | multi-sensor hybrid histidine kinase TERM 1013 1118044 - 1118056 + g 71 -7.7 -3.85114 | opp_overlap 1118044 CGTCGACATCGAGAA GGAGT TCA ACTCC TTTACTCTGGGCTTT TERM 1014 1119698 - 1119688 - G 71 -8.2 -3.77302 | opp_overlap 1119687 TCACGATAAAAGTAA GGCG GAT CGCC ATCTGTAATAACATT Swoo_0830 1120506 - 1120120 - | hypothetical protein TERM 1015 1120548 - 1120530 - H 70 -8.8 -3.11569 | overlap 1120529 CTAGTGAGTCAAAAG GGCGGCTA CAC TAGCCGCA AGCTCAAGACTGCGC TERM 1016 1120639 - 1120626 - H 82 -9.5 -4.08692 | opp_overlap 1120625 1120624 TAAGTGCTGTTAAAA GCCGC AATA GCGGC GCTTTATGTGAGTTT Swoo_0831 1120769 - 1121137 + | response regulator receiver protein Swoo_0832 1121285 - 1121800 + | putative lipoprotein TERM 1017 1122160 - 1122150 - g 82 -6.8 -5.00642 | opp_overlap 1122150 1122153 GAAGTTAGACAAAAA GCTG AGT CAGC TTGGTTGGCAAGCCG Swoo_0833 1121950 - 1122687 + | hypothetical protein TERM 1018 1122740 - 1122777 + T 78 -10.8 -2.77936 | opp_overlap 1122741 1122749, overlap 1122739 1122749 AGATCTCAAGCATAA ACGCTAAAACAGATAG CAAGAT TTATCTGTTTTAGCGG ATTCTATATACTCTT TERM 1019 1122776 - 1122741 - T 100 -13.6 -4.0616 | opp_overlap 1122740 1122739 1122749, overlap 1122749 GATCTCAAGCATAAA CGCTAAAACAGATA GCAAGATT TATCTGTTTTAGCG GATTCTATATACTCT Swoo_0834 1123039 - 1122794 - | hypothetical protein Swoo_0835 1123571 - 1123170 - | hypothetical protein TERM 1020 1124511 - 1124521 + G 76 -5.4 -4.8083 | CAGGATTTAAAACCT TAGC ACT GCTA TTTTTAGTCCTATTG Swoo_0836 1123949 - 1124689 + | integral membrane protein TerC TERM 1021 1124757 - 1124726 - f 79 -8.8 -3.90097 | opp_overlap 1124730, overlap 1124721 1124728 1124730 ATCTCATAAAGAGAA CAGAGGCTTATGCA GTGA TGCATAAGCCTTTT TATTTATTACTATTA TERM 1022 1124755 - 1124728 - f 85 -11.4 -3.53279 | opp_overlap 1124730, overlap 1124726 1124721 1124730 CTCATAAAGAGAACA GAGGCTTATGCA GTGA TGCATAAGCCTT TTTATTTATTACTAT TERM 1023 1124730 - 1124753 + F 100 -14 -5.48514 | opp_overlap 1124728 1124726 1124721 1124730 CATAAAGAGAACAGA GGCTTATGCA GTGA TGCATAAGCC TTTTTATTTATTACT TERM 1024 1124753 - 1124730 - f 100 -14 -3.33035 | opp_overlap 1124730, overlap 1124728 1124726 1124721 CATAAAGAGAACAGA GGCTTATGCA GTGA TGCATAAGCC TTTTTATTTATTACT Swoo_0837 1124856 - 1126322 + | hypothetical protein TERM 1025 1126407 - 1126380 - f 73 -9.2 -2.91695 | opp_overlap 1126380, overlap 1126377 CTTATTTTTAAATTA TCCAGCGCTA ATATTCGA CAGCGCTGGA TTTTTTATGTAAACA TERM 1026 1126380 - 1126407 + F 100 -8.5 -5.36441 | opp_overlap 1126377 1126380 CTTATTTTTAAATTA TCCAGCGCT AATATTCGAC AGCGCTGGA TTTTTTATGTAAACA Swoo_0838 1126462 - 1127145 + | hypothetical protein Swoo_0839 1128047 - 1127277 - | hypothetical protein Swoo_0840 1128153 - 1129019 + | LysR family transcriptional regulator Swoo_0841 1129158 - 1130357 + | ABC-type sugar transport system, periplasmic component Swoo_0842 1130996 - 1130415 - | hypothetical protein Swoo_0843 1132309 - 1131128 - | hypothetical protein Swoo_0844 1134349 - 1132409 - | peptidase S9 prolyl oligopeptidase Swoo_0845 1135642 - 1134470 - | peptidase M19 renal dipeptidase Swoo_0846 1135849 - 1136769 + | TRAP transporter solute receptor TAXI family protein TERM 1027 1136810 - 1136775 - f 100 -10.5 -5.67063 | opp_overlap 1136775 1136776 1136783, overlap 1136776 1136778 TTCATTATAAAAAAA TGAGCAAAGTTGACG TTTAGG CGTCAACTTTGCGCT ATTACTCTTCTATTT TERM 1028 1136775 - 1136811 + F 77 -9.6 -3.4914 | gap 1, opp_overlap 1136775 1136776 1136778, overlap 1136776 1136783 TTCATTATAAAAAAA T-GAGCAAAGTTGACGT TTAG GCGTCAACTTTGCGCTA TTACTCTTCTATTTT TERM 1029 1136809 - 1136776 - f 100 -14 -3.99153 | opp_overlap 1136776 1136775 1136783, overlap 1136775 1136778 TCATTATAAAAAAAT GAGCAAAGTTGACG TTTAGG CGTCAACTTTGCGC TATTACTCTTCTATT TERM 1030 1136776 - 1136809 + F 100 -14.7 -3.29445 | opp_overlap 1136775 1136776 1136778, overlap 1136775 1136783 TCATTATAAAAAAAT GAGCAAAGTTGACGT TTAG GCGTCAACTTTGCGC TATTACTCTTCTATT TERM 1031 1136807 - 1136778 - f 100 -15.2 -3.5694 | opp_overlap 1136776 1136775 1136783, overlap 1136776 1136775 ATTATAAAAAAATGA GCAAAGTTGACG TTTAGG CGTCAACTTTGC GCTATTACTCTTCTA TERM 1032 1136783 - 1136802 + F 74 -8.6 -3.67517 | opp_overlap 1136778 1136776 1136775, overlap 1136776 1136775 AAAAAAATGAGCAAA GTTGACGT TTAG GCGTCAAC TTTGCGCTATTACTC Swoo_0847 1136884 - 1138791 + | TRAP transporter, 4TM/12TM fusion protein Swoo_0848 1138952 - 1139251 + | hypothetical protein Swoo_0849 1139382 - 1139663 + | hypothetical protein TERM 1033 1139693 - 1139679 - f 71 -8.5 -3.39668 | overlap 1139671 TCGTAAATCTGAGAA GGGCG GGCTT CGCCC TGCTAGGGCGGCACT TERM 1034 1139972 - 1139958 - f 70 -7.1 -3.73068 | opp_overlap 1139960 TTGGTAAGCGAAGAA GAGCG GGCTT CGCTC TGCTAGGGCGGCACT TERM 1035 1140254 - 1140240 - f 70 -7.1 -3.73068 | opp_overlap 1140242 TTGGTAAGCGAAGAA GAGCG GGCTT CGCTC TGCTAGGGCGGCACT Swoo_0850 1141110 - 1141757 + | hypothetical protein TERM 1036 1141772 - 1141793 + F 70 -2.9 -5.16132 | opp_overlap 1141777, overlap 1141774 1141777 AATGCTAGCGGTAGG AAGAAGGCT GGGC AGCCATCTC TTTTGTTTTCCTCTC Swoo_0851 1141933 - 1142976 + | hypothetical protein TERM 1037 1142965 - 1142955 - T 83 -6.8 -5.06414 | overlap 1142957 GCGGGCGAAGAAAAA CAGC CAT GCTG AAGGCGTGTGAATCC TERM 1038 1143266 - 1143280 + T 70 -8.6 -3.06133 | opp_overlap 1143263 TGCAGGCAATAATCG CCAATG AAG CATTGG TTAACTAGAGAGTTG Swoo_0852 1144439 - 1143285 - | aminotransferase class I and II TERM 1039 1144476 - 1144493 + H 76 -4.1 -5.25735 | opp_overlap 1144476 1144475, overlap 1144478 1144489 TTCTCTATGGTAAAT GCTCACT ATTT AGTGAAC TTTTTCATTTTTTCA TERM 1040 1144489 - 1144500 + H 70 -3 -5.15634 | opp_overlap 1144476 1144475, overlap 1144478 1144476 ATGCTCACTATTTAG TGAA CTTT TTCA TTTTTTCATGGCCTC TERM 1041 1144594 - 1144580 - H 75 -8.5 -3.73068 | CGGTGAAGCTAAGAA GGGCG GGCTT CGCCC TGCTAGGGCGGCACT TERM 1042 1144839 - 1144829 - H 70 -8.2 -3.36492 | opp_overlap 1144836 GTTTGAAGCTGAGAA GGGC TTT GCCC TGCTAGGACGTTTGC TERM 1043 1144922 - 1144911 - H 75 -2.2 -5.40873 | AAGACAAAAACAAAA GATG TTCT CACC ACGGAGCGCTGCGCT TERM 1044 1146583 - 1146564 - g 74 -2.1 -5.2015 | opp_overlap 1146553 1146564 1146568, overlap 1146553 1146565 TCAACAAGAGAAAAA TCTTGCT TTACCT AGCAAGG CTTTTGAAGCAACAG Swoo_0853 1145713 - 1147050 + | ATPase Swoo_0854 1147043 - 1147882 + | hypothetical protein TERM 1045 1148015 - 1148063 + F 84 -6.3 -5.31519 | gap 3, overlap 1148016 1148023 AGCCATAATGGATGA TGG-CTAA-GGCTC-GGTGGGACA TGGA TGTCCCATCTGAGCTGTTAGGCTA TTTTTGTTTAAGTAT TERM 1046 1148016 - 1148061 + F 85 -9.2 -4.2793 | gap 2, overlap 1148015 1148023 GCCATAATGGATGAT GGCTAA-GGCTC-GGTGGGACA TGGA TGTCCCATCTGAGCTGTTAGGC TATTTTTGTTTAAGT TERM 1047 1148023 - 1148053 + F 91 -12.7 -3.12892 | gap 1, overlap 1148016 1148015 TGGATGATGGCTAAG GCTC-GGTGGGACA TGGA TGTCCCATCTGAGC TGTTAGGCTATTTTT Swoo_0856 1148574 - 1149617 + | hypothetical protein Swoo_0857 1149807 - 1149589 - | hypothetical protein TERM 1048 1150097 - 1150112 + r 74 -9 -3.66356 | opp_overlap 1150096 AGCCCCAAATCACAT TGGGCA TAAT TGCCCA TTTAACCTTCCCAAT Swoo_0858 1150617 - 1150177 - | Fe-S metabolism associated SufE TERM 1049 1150521 - 1150533 + g 70 -9.1 -3.14132 | GACGATAGCGCTCCT GCCAG TTA CTGGC TTGCTCAAACAACGG Swoo_0859 1152072 - 1150861 - | SufS subfamily cysteine desulfurase TERM 1050 1151123 - 1151141 + g 72 -8.8 -3.57792 | TAGAGTGTGATGTCG CCCAGCTG TTT CAGCTGAG TTTGAAGGTAGCTAA TERM 1051 1152136 - 1152107 - R 93 -10.8 -4.89567 | opp_overlap 1152115 GCTGAAAATAGAAAA GGCGATGAGATC ATCAAA GATCTTATCGCC TAATGCAAGGAGCTT Swoo_0860 1153218 - 1152175 - | aldo/keto reductase Swoo_0861 1154315 - 1153311 - | MarR family transcriptional regulator Swoo_0862 1154957 - 1154394 - | hypothetical protein TERM 1052 1154603 - 1154588 - G 79 -9 -3.87869 | overlap 1154591 TTAATGCTTTATAAA CCACTG GCGG CAGTGG GAGTATGGCACTGCG Swoo_0863 1155614 - 1156885 + | aromatic amino acid permease TERM 1053 1156912 - 1156938 + F 93 -11.6 -4.208 | opp_overlap 1156911 TTAAGATTGATAAGG GGATCAGCACTG AAT TGGTGCTGGTCC TTTCTGCTTTTGAGG TERM 1054 1157392 - 1157404 + G 72 -3.3 -4.92757 | CTAAAACTTACTACT CAACC GGT GGTGG TTTTATTGTTGATGA Swoo_0864 1156962 - 1158329 + | L-serine dehydratase 1 TERM 1055 1158470 - 1158432 - T 77 -6 -4.82901 | opp_overlap 1158432 1158441 GGCCTTGGAGAAAAA GCTAAGTCACAAGCGATA AGT TACTGCTTGCTTCTTAGC TTTTTCTCGCCGCGA Swoo_0865 1159000 - 1158557 - | GCN5-related N-acetyltransferase TERM 1056 1158839 - 1158856 + g 70 -2.6 -4.91712 | CTCTCCATCGACTTC GGCTAC AAGGTA GAAGCC TTTTTCTGGGTTAGA Swoo_0866 1159128 - 1159424 + | hypothetical protein TERM 1057 1159422 - 1159478 + T 80 -11.2 -3.14136 | gap 1, opp_overlap 1159432 1159436 1159443, overlap 1159443 GGATACTTCGATGCT TAGGCATATACCAATAAAAAA-CCGCC AAAA GGCGGTTTTTTTATTGGCATAAATCTA TTGCCTGCTTAATAC TERM 1058 1159468 - 1159432 - T 100 -16.2 -2.91383 | gap 1, opp_overlap 1159422 1159443, overlap 1159436 1159443 ATGCTTAGGCATATA CCAATAAAAAA-CCGCC AAAA GGCGGTTTTTTTATTGG CATAAATCTATTGCC TERM 1059 1159463 - 1159436 - T 84 -11.4 -3.32993 | opp_overlap 1159422 1159443, overlap 1159432 1159443 TTAGGCATATACCAA TAAAAAACCGCC AAAA GGCGGTTTTTTT ATTGGCATAAATCTA TERM 1060 1159443 - 1159456 + T 100 -9.5 -5.80364 | opp_overlap 1159436 1159432 1159443, overlap 1159422 TATACCAATAAAAAA CCGCC AAAA GGCGG TTTTTTTATTGGCAT TERM 1061 1159456 - 1159443 - T 100 -9.5 -5.5353 | opp_overlap 1159443 1159422, overlap 1159436 1159432 TATACCAATAAAAAA CCGCC AAAA GGCGG TTTTTTTATTGGCAT Swoo_0867 1159889 - 1159476 - | protein of unknown function DUF306 Meta and HslJ Swoo_0868 1160949 - 1159990 - | putative diguanylate cyclase TERM 1062 1160437 - 1160416 - G 91 -13.1 -3.19463 | opp_overlap 1160409 CCTAGGAGCCATTAA GCTAAACCC ATAG GGGTTTAGC ATGCAGGTTTGATCA Swoo_0869 1162136 - 1161144 - | diguanylate cyclase Swoo_0870 1162305 - 1162850 + | acetyltransferase Swoo_0871 1162871 - 1163221 + | hypothetical protein Swoo_0872 1163459 - 1164154 + | hypothetical protein TERM 1063 1164239 - 1164225 - T 74 -10 -2.70354 | opp_overlap 1164224 1164223 CGTTTGATAAATCTA TCAGGC TGC GCCTGA ACTTTAAGTTAGACT Swoo_0873 1166052 - 1164301 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Swoo_0874 1166655 - 1166053 - | isochorismatase hydrolase TERM 1064 1166995 - 1167008 + r 100 -9.5 -5.26316 | opp_overlap 1166995 ATAGGTATAAAAAAA CCGCC AGAA GGCGG TTTTTTGTGGGCTAA TERM 1065 1167008 - 1166995 - R 100 -9.5 -5.65177 | opp_overlap 1166995 ATAGGTATAAAAAAA CCGCC AGAA GGCGG TTTTTTGTGGGCTAA Swoo_0875 1168203 - 1167049 - | methionine adenosyltransferase TERM 1066 1168593 - 1168580 - H 82 -8.1 -4.28994 | GATGAGGCAGTAAAA TGCCC ATTA GGGCA ATAAACATTTGCGTC Swoo_0876 1168730 - 1170721 + | transketolase TERM 1067 1170831 - 1170860 + F 100 -17.3 -3.524 | opp_overlap 1170831 1170834, overlap 1170834 TAAGCATTTATGATA CAACGGCTTACCT AATA AGGTAGGCCGTTG TTGTATCAATAAATG TERM 1068 1170860 - 1170831 - f 100 -15.1 -2.8194 | opp_overlap 1170831 1170834, overlap 1170834 TAAGCATTTATGATA CAACGGCTTACCT AATA AGGTAGGCCGTTG TTGTATCAATAAATG TERM 1069 1170834 - 1170857 + F 100 -13.2 -3.8969 | opp_overlap 1170831 1170834, overlap 1170831 GCATTTATGATACAA CGGCTTACCT AATA AGGTAGGCCG TTGTTGTATCAATAA TERM 1070 1170857 - 1170834 - f 83 -11 -3.55447 | opp_overlap 1170834 1170831, overlap 1170831 GCATTTATGATACAA CGGCTTACCT AATA AGGTAGGCCG TTGTTGTATCAATAA Swoo_0877 1170902 - 1171924 + | D-erythrose-4-phosphate dehydrogenase Swoo_0878 1172045 - 1173220 + | phosphoglycerate kinase TERM 1071 1173305 - 1173293 - f 74 -6.3 -4.60797 | GTGCGACATATAAAA GAAAC CGT GTTTC GATTCAGGTGCTTTC Swoo_0879 1173421 - 1174485 + | fructose-bisphosphate aldolase, class II TERM 1072 1174505 - 1174539 + F 100 -15.2 -4.03806 | opp_overlap 1174513, overlap 1174513 CCGTTTTACTTATTG TTTAAAAATGCCCGCA ACC TGCGGGCATTTTTGTA TTTATCGCTTTAATT TERM 1073 1174513 - 1174531 + F 100 -14.6 -5.24799 | opp_overlap 1174513, overlap 1174505 CTTATTGTTTAAAAA TGCCCGCA ACC TGCGGGCA TTTTTGTATTTATCG TERM 1074 1174531 - 1174513 - f 100 -14.6 -4.58395 | opp_overlap 1174513 1174505 CTTATTGTTTAAAAA TGCCCGCA ACC TGCGGGCA TTTTTGTATTTATCG Swoo_0880 1174714 - 1175454 + | hypothetical protein TERM 1075 1175491 - 1175523 + F 91 -9.3 -4.93968 | opp_overlap 1175491 TTCCGTCTCAGTATA GGGATGAAAGC ATTTTTTATTG GCTTTCATCCC TTTTTAGTTATACAT TERM 1076 1175523 - 1175491 - f 72 -9.3 -2.78384 | opp_overlap 1175491 TTCCGTCTCAGTATA GGGATGAAAGC ATTTTTTATTG GCTTTCATCCC TTTTTAGTTATACAT TERM 1077 1176067 - 1176080 + G 74 -3.9 -4.93898 | TGGCAGTATTTCGGC TAAAG ATTA CTTTA TTTTTATCGTACTGT Swoo_0881 1175726 - 1176466 + | putative transcriptional regulator, CadC Swoo_0882 1176459 - 1177001 + | hypothetical protein TERM 1078 1177026 - 1177010 - T 90 -12.3 -3.71649 | opp_overlap 1177010 TTTTTAAAGGGGAAA GGAGAGC GGG GCTCTCC TTTATCACAGATCAC TERM 1079 1177010 - 1177026 + T 90 -12.3 -3.86897 | opp_overlap 1177010 TTTTTAAAGGGGAAA GGAGAGC GGG GCTCTCC TTTATCACAGATCAC Swoo_0883 1177562 - 1177038 - | hypothetical protein Swoo_0884 1178395 - 1177574 - | cytochrome c, putative Swoo_0885 1178856 - 1179596 + | transcriptional regulator, CadC Swoo_0886 1179589 - 1180107 + | hypothetical protein Swoo_0887 1180183 - 1181568 + | hypothetical protein Swoo_0888 1183811 - 1181595 - | putative diguanylate cyclase Swoo_0889 1184555 - 1183953 - | radical SAM domain-containing protein TERM 1080 1184624 - 1184653 + r 100 -14.5 -3.2819 | gap 1, opp_overlap 1184630, overlap 1184630 AATGTTGTTTAGATC GA-AAAAGGGAGGC TTA GCCTCCCTTTTGTC TTCGTAATGTTAAGT TERM 1081 1184646 - 1184630 - R 100 -13.7 -4.70659 | opp_overlap 1184624 1184630 GTTTAGATCGAAAAA GGGAGGC TTA GCCTCCC TTTTGTCTTCGTAAT TERM 1082 1184630 - 1184646 + r 100 -13.7 -4.71186 | opp_overlap 1184630, overlap 1184624 GTTTAGATCGAAAAA GGGAGGC TTA GCCTCCC TTTTGTCTTCGTAAT Swoo_0890 1187824 - 1184663 - | acriflavin resistance protein TERM 1083 1186926 - 1186946 + g 74 -6.9 -4.3129 | overlap 1186928 ATATAGGTTTTGACC TCCTCTGAA ATT TTCAGAGCA TTTTGATCATCAATG Swoo_0891 1189038 - 1187824 - | RND family efflux transporter MFP subunit TERM 1084 1188540 - 1188564 + g 95 -3.5 -5.63103 | GGGCCATAGCAGCTT GAGCAAACTTA ACA TTGGCTTGCTC TTTTTTTAGTTGAGG TERM 1085 1188742 - 1188756 + g 78 -5.6 -5.02074 | opp_overlap 1188741 CGATGGCTCAATCAT GGCGAG CTG CTCCCC TTTTTTAACCACTCC TERM 1086 1188817 - 1188833 + g 75 -4.4 -4.89477 | TAGACGTCCTTTTAC CTCAGT GACTA GCTGAG TTTTATTCTTAGGGG TERM 1087 1189275 - 1189254 - R 83 -11.5 -3.08996 | opp_overlap 1189251 TATGTTGATTGAAGA GGGAGCCGC GATT GCGGCTCCT AAAGTTTACCTAAAT TERM 1088 1189284 - 1189296 + r 79 -6.3 -4.96845 | GGCTCCTAAAGTTTA CCTAA ATG TTAGG TTTATTTCTTTTTCT Swoo_0892 1190524 - 1189298 - | DEAD/DEAH box helicase domain-containing protein TERM 1089 1189737 - 1189764 + g 72 -7.6 -4.09685 | ACACGCTGCAGCATC CCCTCTAAGCTG GCAA CGGCTTCGCGGG TTTTAACGAATACAA Swoo_0893 1191416 - 1190685 - | methyltransferase small TERM 1090 1190749 - 1190763 + g 72 -7.2 -4.11585 | overlap 1190734 TAGCTTGCATCAGGC TCTTTG ATG CAAAGA TTGTTTGTGATCACT TERM 1091 1192042 - 1192058 + G 81 -9.4 -4.1523 | CAGGAAACTTAATTT TCCCGC CACTT GCGGGA TTTCTCTCTGGTGAG Swoo_0894 1191939 - 1193288 + | branched-chain amino acid transport system II carrier protein TERM 1092 1193318 - 1193373 + F 100 -9.2 -5.47159 | gap 1, opp_overlap 1193331, overlap 1193319 1193327 1193331 TAGGCATGTAAGTTA AGCTGACATAAAATAGGGCGTAGACAT TTA ATGTTTACGCCCTATTA-ATTTCTGCG TTTTTTATGTTGGAG TERM 1093 1193319 - 1193372 + F 95 -12.7 -3.87211 | gap 1, opp_overlap 1193331, overlap 1193318 1193327 1193331 AGGCATGTAAGTTAA GCTGACATAAAATAGGGCGTAGACAT TTA ATGTTTACGCCCTATTA-ATTTCTGC GTTTTTTATGTTGGA TERM 1094 1193327 - 1193365 + F 100 -12.6 -4.11869 | opp_overlap 1193331, overlap 1193319 1193318 1193331 AAGTTAAGCTGACAT AAAATAGGGCGTAGACAT TTA ATGTTTACGCCCTATTAA TTTCTGCGTTTTTTA TERM 1095 1193331 - 1193361 + F 100 -17.8 -3.63662 | opp_overlap 1193331, overlap 1193327 1193319 1193318 TAAGCTGACATAAAA TAGGGCGTAGACAT TTA ATGTTTACGCCCTA TTAATTTCTGCGTTT TERM 1096 1193361 - 1193331 - f 100 -15.6 -4.55118 | opp_overlap 1193331 1193327 1193319 1193318 TAAGCTGACATAAAA TAGGGCGTAGACAT TTA ATGTTTACGCCCTA TTAATTTCTGCGTTT Swoo_0895 1193396 - 1194322 + | tyrosine recombinase XerD Swoo_0896 1194512 - 1195240 + | thiol:disulfide interchange protein DsbC TERM 1097 1195283 - 1195257 - f 100 -13.8 -3.2614 | opp_overlap 1195257 CAGTTGCTAGATTAA GCCAGTAGTATC TTA GGTACTACTGGC TTTTTGCTTTAATTC TERM 1098 1195257 - 1195283 + F 100 -16 -5.04222 | opp_overlap 1195257 CAGTTGCTAGATTAA GCCAGTAGTATC TTA GGTACTACTGGC TTTTTGCTTTAATTC TERM 1099 1196847 - 1196835 - g 70 -10.5 -2.6072 | opp_overlap 1196835, overlap 1196831 1196827 GAGCTAAGGAATGCA GGCCC ATG GGGCC AAGAGTTCCCTGAGC Swoo_0897 1195380 - 1197104 + | single-stranded-DNA-specific exonuclease RecJ Swoo_0898 1198066 - 1197131 - | coenzyme PQQ synthesis protein B TERM 1100 1199047 - 1199092 + r 78 -7.1 -4.42653 | gap 1, opp_overlap 1199046 1199047 1199063, overlap 1199067 TTCTCACTAAAATAC CTAACGTATAAGGAT-AGGC CCGCGCA GCCGCGTCCTTATATGTTAG TTTTATGCATCCACT Swoo_0899 1200285 - 1199095 - | hypothetical protein Swoo_0900 1200962 - 1200402 - | hypothetical protein TERM 1101 1201021 - 1200993 - R 70 -8.7 -3.19157 | CACTAACGGCAGTAA CAGCGGGCTGACC ATA GGCCAGTCCGGCG AGTGAAATAAGCAGC Swoo_0901 1201578 - 1201060 - | hypothetical protein TERM 1102 1201227 - 1201211 - G 71 -8.7 -3.5594 | AATGCAGGCTCGAAA CATGGGA TAT TCCCACG CAACTGGTCTAAATC TERM 1103 1202017 - 1202038 + r 88 -8.7 -4.76802 | opp_overlap 1202017 CGAAGGCGAAAAAAA GCGACCAGT TTAA AGTGGTCGC TTTATTATTTTTCGA TERM 1104 1202038 - 1202017 - R 100 -8.7 -5.47399 | opp_overlap 1202017 CGAAGGCGAAAAAAA GCGACCAGT TTAA AGTGGTCGC TTTATTATTTTTCGA Swoo_0902 1203823 - 1202135 - | malate dehydrogenase TERM 1105 1203899 - 1203915 + r 72 -5.1 -4.7908 | opp_overlap 1203888, overlap 1203890 1203902 AAATGTGATCTTTGA TCTCCTT TCG AAGGTGA TTTATTTATGTTTTT TERM 1106 1203993 - 1203978 - R 100 -9 -5.77988 | opp_overlap 1203978 ATAGAGATAAAAAAA CACAGC CTAG GCTGTG TTTTTAAGTATTACT TERM 1107 1203978 - 1203993 + r 88 -9 -4.75308 | opp_overlap 1203978 ATAGAGATAAAAAAA CACAGC CTAG GCTGTG TTTTTAAGTATTACT Swoo_0903 1204480 - 1204016 - | hypothetical protein Swoo_0904 1205733 - 1204609 - | beta-lactamase Swoo_0905 1207039 - 1205765 - | putative manganese transporter TERM 1108 1206426 - 1206408 - G 73 -10.2 -3.06671 | ACACTCACCTCAATA GGGGCTGG CAT CCAGCCCA TCATGGCGACTAAAA TERM 1109 1209131 - 1209146 + G 72 -5.4 -4.49556 | gap 1, opp_overlap 1209131 CTTTGGTACAACAAC CGAC-CC TAA GGTGTCG TTTCTTTGGTCACCA Swoo_0906 1207443 - 1210070 + | TonB-dependent receptor TERM 1110 1210124 - 1210106 - f 100 -13.1 -3.50456 | opp_overlap 1210106, overlap 1210102 1210100 GTAACTAAATACTAA GCGGCCC CACAT GGGCCGC TTTTTTTGTTTTAAT TERM 1111 1210106 - 1210124 + F 100 -13.1 -6.11229 | opp_overlap 1210106 1210102 1210100 GTAACTAAATACTAA GCGGCCC CACAT GGGCCGC TTTTTTTGTTTTAAT Swoo_0907 1210181 - 1210804 + | glutathione S-transferase domain-containing protein TERM 1112 1210845 - 1210861 + T 89 -3.7 -5.73978 | opp_overlap 1210845 1210838, overlap 1210838 TTAGAAACGAAAAAA GCATC GATGAAA GATGC TTTTTTATTTGTCAT TERM 1113 1210861 - 1210845 - T 79 -3.7 -5.42514 | opp_overlap 1210838 1210845, overlap 1210838 TTAGAAACGAAAAAA GCATC GATGAAA GATGC TTTTTTATTTGTCAT Swoo_0908 1211511 - 1210954 - | hypothetical protein Swoo_0909 1212058 - 1211657 - | hypothetical protein TERM 1114 1212168 - 1212133 - R 79 -9.1 -3.87815 | opp_overlap 1212142 TGTTAGTTGGATAAA TGGTCGAAAGCCTGA GGTGCT TTAGGCTTTCGACTA GGGGAGACTAGGCCG Swoo_0910 1212976 - 1212176 - | hypothetical protein TERM 1115 1213386 - 1213402 + r 82 -9.4 -4.07885 | opp_overlap 1213386 TTACAGGCAAAAAAA GAGCGC CTATA GCGCTC TTTTAAAAGAAAATA TERM 1116 1213402 - 1213386 - R 100 -10.1 -5.50499 | opp_overlap 1213386 TTACAGGCAAAAAAA GAGCGCC TAT AGCGCTC TTTTAAAAGAAAATA Swoo_0911 1215506 - 1213422 - | endothelin-converting protein 1 TERM 1117 1215641 - 1215663 + r 76 -10.6 -2.87211 | opp_overlap 1215645, overlap 1215645 GCTTTTGACCTGTGA TGAAGCCGAT TGA AGCGGCTTCA TATGTAAGAAAAGGT Swoo_0913 1217662 - 1215962 - | pseudouridine synthase Swoo_0914 1218132 - 1219169 + | glutathione synthase TERM 1118 1219340 - 1219318 - g 87 -7.8 -5.06451 | opp_overlap 1219316 GATGATCTTAAAAAA TCCTTTTTAC TGA GTAAAGAGGA GCGATTTTATGAGGA TERM 1119 1219584 - 1219605 + G 70 -10.3 -2.62613 | opp_overlap 1219584 1219586 1219601, overlap 1219582 CATTGCTCGATTAGA GATGCTATT TAAA AATAGCATC GTCTTTGACATGCAC TERM 1120 1219605 - 1219584 - g 71 -10.3 -2.78596 | opp_overlap 1219584 1219582, overlap 1219586 1219601 CATTGCTCGATTAGA GATGCTATT TAAA AATAGCATC GTCTTTGACATGCAC Swoo_0915 1219153 - 1221147 + | hypothetical protein TERM 1121 1221193 - 1221171 - T 83 -9.8 -4.01078 | overlap 1221172 AAAACTTATGACAAA CCCCTCTCAC GTT ATGTGAGGGG GCTAATAACAATCAG Swoo_0916 1221692 - 1221231 - | AsnC family transcriptional regulator Swoo_0917 1222510 - 1221833 - | pseudouridine synthase TERM 1122 1222097 - 1222120 + g 72 -7.4 -4.02736 | overlap 1222087 ACTTATCACTTCATA GTGGGTTAGT GATG GCTTACCCAC TTTATGATCTACCTT TERM 1123 1222587 - 1222576 - H 73 -4.4 -4.88407 | TGAGGCAAGTAAAAA TAGC GCCA GCTA GCCTCTCTTTTGGCT Swoo_0918 1222734 - 1224911 + | transcriptional regulator, CadC Swoo_0919 1225112 - 1225336 + | hypothetical protein TERM 1124 1225388 - 1225361 - T 91 -7 -5.45652 | opp_overlap 1225361 ATGGTTAACAAAAAA TGGTTGTGTATC AAGA GGTGCACAACCA TTTTTTGTTTTTAAC TERM 1125 1225361 - 1225388 + T 100 -11.4 -5.93252 | opp_overlap 1225361 ATGGTTAACAAAAAA TGGTTGTGTATC AAGA GGTGCACAACCA TTTTTTGTTTTTAAC TERM 1126 1225530 - 1225548 + T 81 -6.8 -4.95155 | CTTTTCTATTTAACT CTTATGTT CGG GACATAAG TTTTTCTACTGTAAC TERM 1127 1226298 - 1226320 + T 100 -7.7 -5.91981 | opp_overlap 1226298 CTCCCTTTAGACATA GGGGTGCTT CATTT GAGCACTCC TTTTTTTTGGCTTTT Swoo_0920 1226750 - 1226460 - | hypothetical protein Swoo_0921 1227319 - 1226792 - | methyltransferase type 12 Swoo_0922 1227704 - 1227294 - | hypothetical protein TERM 1128 1228680 - 1228691 + G 75 -4.4 -5.00616 | opp_overlap 1228680 GATGTGTATGAAAAT GAGA AATC TCTC TTTTTTGAAGACAAG Swoo_0923 1227894 - 1228886 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Swoo_0924 1229013 - 1229750 + | dienelactone hydrolase TERM 1129 1229803 - 1229762 - T 80 -11.2 -3.19463 | gap 1, opp_overlap 1229756 1229764 1229765, overlap 1229763 TTGATCACTGATGAA TTGTTGCAGTAAGAGTCAT GATAT ATGACTCTTACTGCAA-AT TACTTAGCTTTGCTT TERM 1130 1229802 - 1229763 - T 100 -14.7 -2.51464 | gap 1, opp_overlap 1229756 1229764 1229765, overlap 1229762 TGATCACTGATGAAT TGTTGCAGTAAGAGTCAT GATAT ATGACTCTTACTGCAA-A TTACTTAGCTTTGCT TERM 1131 1229764 - 1229802 + T 100 -17 -3.43619 | opp_overlap 1229763 1229762, overlap 1229756 1229765 GATCACTGATGAATT GTTGCAGTAAGAGTCATG ATA TATGACTCTTACTGCAAA TTACTTAGCTTTGCT TERM 1132 1229765 - 1229801 + T 100 -20.5 -2.65448 | opp_overlap 1229763 1229762, overlap 1229764 1229756 ATCACTGATGAATTG TTGCAGTAAGAGTCATG ATA TATGACTCTTACTGCAA ATTACTTAGCTTTGC Swoo_0925 1230334 - 1229807 - | hypothetical protein Swoo_0926 1230597 - 1230899 + | hypothetical protein Swoo_0927 1230971 - 1231714 + | spermine synthase Swoo_0928 1231924 - 1232493 + | peroxiredoxin Swoo_0929 1232677 - 1234245 + | alkyl hydroperoxide reductase, F subunit TERM 1133 1234274 - 1234297 + F 100 -11 -5.4111 | overlap 1234275 AACGTTTTTCATCTT TCAGCCAGTC ATCA GACTGGCTGC TTTTTTATAATTATT TERM 1134 1234275 - 1234296 + F 100 -14.5 -3.82226 | overlap 1234274 ACGTTTTTCATCTTT CAGCCAGTC ATCA GACTGGCTG CTTTTTTATAATTAT Swoo_0930 1234343 - 1235515 + | diguanylate cyclase TERM 1135 1235520 - 1235537 + T 100 -12.7 -4.42238 | opp_overlap 1235517 1235520 TCGCTGCTTAAAGTA GCGCCCT GGAG AGGGCGC TTTTGATTCAGCTCG TERM 1136 1235537 - 1235520 - T 91 -12.7 -2.90496 | opp_overlap 1235520, overlap 1235517 TCGCTGCTTAAAGTA GCGCCCT GGAG AGGGCGC TTTTGATTCAGCTCG Swoo_0931 1235746 - 1235558 - | hypothetical protein Swoo_0932 1237269 - 1235845 - | hypothetical protein TERM 1137 1235926 - 1235916 - G 76 -8.2 -4.19746 | opp_overlap 1235921 TGGAGCTCAAAATAA GGCC AAT GGCC AGAGCCACATTTTGC TERM 1138 1237140 - 1237117 - G 77 -5.3 -4.95155 | opp_overlap 1237117 1237120, overlap 1237120 TTTAGACCAGAAAAA GTAGAGCTT GACTTT AAGCTCTCC TTTTTCATCTATATA TERM 1139 1237117 - 1237140 + g 80 -6 -4.86133 | opp_overlap 1237117 1237120, overlap 1237120 TTTAGACCAGAAAAA GTAGAGCTTG ACTT TAAGCTCTCC TTTTTCATCTATATA Swoo_0933 1237889 - 1237443 - | hypothetical protein Swoo_0934 1238127 - 1238618 + | MarR family transcriptional regulator Swoo_0935 1238628 - 1239803 + | FAD dependent oxidoreductase Swoo_0936 1239879 - 1241039 + | chromate transporter TERM 1140 1241047 - 1241084 + T 87 -12.2 -3.1886 | gap 1, opp_overlap 1241055, overlap 1241048 1241055 1241080 TTAGTTAAGCTGGTT C-GGAGTAAGCTGGAAA TACCT TTTCCTGCTTACTCCTG TTGATAGGATTAACT TERM 1141 1241048 - 1241082 + T 100 -15.9 -3.15574 | opp_overlap 1241055, overlap 1241047 1241055 1241080 TAGTTAAGCTGGTTC GGAGTAAGCTGGAAA TACCT TTTCCTGCTTACTCC TGTTGATAGGATTAA Swoo_0937 1245374 - 1241094 - | formate dehydrogenase, alpha subunit TERM 1142 1245641 - 1245618 - R 78 -11.2 -2.88579 | opp_overlap 1245611, overlap 1245638 1245640 TGAACTTGGCACAGA TGTGCTTATT AAAG AATAAGCACA TCTGGGAGATACGGA Swoo_0938 1246640 - 1245657 - | Ion transport 2 domain-containing protein Swoo_0939 1246865 - 1247963 + | hypothetical protein Swoo_0940 1248028 - 1249533 + | lysyl-tRNA synthetase TERM 1143 1249565 - 1249596 + T 91 -13.2 -2.6652 | opp_overlap 1249573, overlap 1249573 AACCGAGCATTGAAT TTAAAAAACCAGCC AATT GGCTGGTTTTTTTA TGGCTTACTTTTCAT TERM 1144 1249588 - 1249573 - T 93 -10.4 -5.16572 | opp_overlap 1249565 1249573 ATTGAATTTAAAAAA CCAGCC AATT GGCTGG TTTTTTTATGGCTTA TERM 1145 1249573 - 1249588 + T 100 -10.4 -5.66684 | opp_overlap 1249573, overlap 1249565 ATTGAATTTAAAAAA CCAGCC AATT GGCTGG TTTTTTTATGGCTTA Swoo_0941 1250686 - 1249601 - | L-sorbosone dehydrogenase, putative TERM 1146 1249783 - 1249793 + g 78 -5.4 -4.90013 | opp_overlap 1249768 CCACACGGACGATGC GGTA ACC TACC TTTTTACTTCGATTC Swoo_0942 1251441 - 1250833 - | pseudouridine synthase TERM 1147 1251310 - 1251321 + g 71 -2.2 -5.1361 | TGGAAAGTCAGCTAA CTCT GCGA GGAG TTTTTTACGCTTTCT TERM 1148 1251551 - 1251538 - H 74 -5.3 -4.78597 | opp_overlap 1251538 CTAATAATAAATAAA TGACA GCGT TGTCA TTTGGCGTTATAGTA TERM 1149 1252203 - 1252226 + G 81 -9.6 -3.90922 | opp_overlap 1252203 AAGACTCTGACTAAA GCGACCATTG AAGA CAATGCTCGC TTCTTTAAAGAGGAT TERM 1150 1252226 - 1252203 - g 79 -9.6 -3.74519 | opp_overlap 1252203 AAGACTCTGACTAAA GCGACCATTG AAGA CAATGCTCGC TTCTTTAAAGAGGAT Swoo_0943 1251726 - 1252520 + | glucosamine-6-phosphate isomerase TERM 1151 1252551 - 1252568 + F 100 -11.3 -6.15828 | opp_overlap 1252551 CCTACTGCTTAAAAA GGACTGC TGAT GCAGTCC TTTTTTTTTGCTAAA TERM 1152 1252568 - 1252551 - f 90 -11.3 -4.58395 | opp_overlap 1252551 CCTACTGCTTAAAAA GGACTGC TGAT GCAGTCC TTTTTTTTTGCTAAA Swoo_0944 1252637 - 1253170 + | hypothetical protein Swoo_0945 1253205 - 1254596 + | diguanylate cyclase TERM 1153 1254734 - 1254712 - f 83 -10.8 -3.4096 | opp_overlap 1254703 1254711 1254715, overlap 1254699 1254703 1254715 AATATATTGTAAATA CAATTGATAA TCG TTATCAATTG ATCTACTGTCTCGCC Swoo_0946 1254794 - 1256914 + | TonB-dependent siderophore receptor TERM 1154 1256970 - 1256951 - f 71 -6.4 -4.06904 | opp_overlap 1256952, overlap 1256952 CTAGCCAATTAGAAA GTGGAACC TTAA GGTTCCAT TTTTTTATCTGTACT TERM 1155 1256952 - 1256969 + F 100 -9.9 -5.76633 | opp_overlap 1256951 1256952 TAGCCAATTAGAAAG TGGAACC TTAA GGTTCCA TTTTTTTATCTGTAC TERM 1156 1256969 - 1256952 - f 75 -9.9 -3.03661 | opp_overlap 1256952, overlap 1256951 TAGCCAATTAGAAAG TGGAACC TTAA GGTTCCA TTTTTTTATCTGTAC Swoo_0947 1257077 - 1257757 + | nitroreductase Swoo_0948 1257797 - 1258114 + | cupin 2 domain-containing protein TERM 1157 1258126 - 1258143 + F 83 -7.7 -4.55798 | overlap 1258141 CTGAACTTTCTTCAA TGAGCCG CCAC TGGCTCA TTTTAGTTTAAACTG Swoo_0949 1258247 - 1260172 + | peptidase U32 TERM 1158 1260215 - 1260245 + F 90 -11.3 -4.49389 | gap 1, opp_overlap 1260217 TATAAATATCTTCAA GAGCGCCGACTATT TACC AGTAGT-GGCGCTC TTTTGCTTATAACGT TERM 1159 1260255 - 1260269 + F 79 -3.6 -5.49729 | GCGCTCTTTTGCTTA TAACGT GTT ATGTTA TTTTTTTAAATAATT Swoo_0950 1260297 - 1260671 + | hypothetical protein TERM 1160 1260671 - 1260686 + F 70 -6.2 -4.27192 | overlap 1260675 CAATTTTTCTCTCTA GTTTTC GGTA GAAAAC TTTTACTACAGATTT TERM 1161 1261017 - 1261027 + F 75 -8.2 -3.84246 | overlap 1260997 TGAAGCCATCCTTGG CCGC TCT GCGG TTTCATCCTTGAAAC Swoo_0951 1261765 - 1262121 + | ankyrin TERM 1162 1262223 - 1262202 - T 72 -8.7 -3.27565 | overlap 1262205 AACTAGAGAATGTAA CTAGCCTTC ATTC GAAGGCTTG CCAACTTAGCGAGAA Swoo_0952 1262533 - 1262255 - | PpiC-type peptidyl-prolyl cis-trans isomerase Swoo_0953 1262782 - 1264062 + | extracellular ligand-binding receptor Swoo_0954 1264075 - 1266174 + | integral membrane sensor signal transduction histidine kinase TERM 1163 1266203 - 1266239 + T 79 -10.4 -3.34398 | gap 1, opp_overlap 1266206, overlap 1266201 1266210 TCTCCCCGTTTAAAA C-AATGAAGGTTTACCA GCCA TGGTAAACCTTCATAAG TGTTTAAGGGGCAAA TERM 1164 1266235 - 1266206 - T 100 -16.7 -4.17048 | opp_overlap 1266203 1266201 1266210 CCCCGTTTAAAACAA TGAAGGTTTACCA GCCA TGGTAAACCTTCA TAAGTGTTTAAGGGG TERM 1165 1266210 - 1266231 + T 84 -11.7 -3.23638 | opp_overlap 1266206, overlap 1266203 1266201 GTTTAAAACAATGAA GGTTTACCA GCCA TGGTAAACC TTCATAAGTGTTTAA Swoo_0955 1266981 - 1266325 - | ribose 5-phosphate isomerase TERM 1166 1266941 - 1266957 + g 91 -7.2 -5.23316 | TCAACGTATTCTAGT GCTGCC CAACC GGCGGC TTTTTTCATCTCATC Swoo_0956 1267237 - 1268172 + | hypothetical protein Swoo_0957 1268702 - 1269349 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 1167 1269383 - 1269363 - T 83 -11.2 -3.66541 | opp_overlap 1269363 1269368 1269370 AAGATAGATCTCAAA GCTAGGAG TGAAG CTCCTAGC TTTACTGTTTTTATA TERM 1168 1269363 - 1269383 + T 95 -11.9 -4.16158 | opp_overlap 1269363, overlap 1269368 1269370 AAGATAGATCTCAAA GCTAGGAGT GAA GCTCCTAGC TTTACTGTTTTTATA TERM 1169 1269368 - 1269390 + T 76 -5.6 -5.01535 | opp_overlap 1269363, overlap 1269363 1269370 AGATCTCAAAGCTAG GAGTGAAGCT CCT AGCTTTACTG TTTTTATAGTTATGC TERM 1170 1269370 - 1269388 + T 79 -8.2 -4.12226 | opp_overlap 1269363, overlap 1269363 1269368 ATCTCAAAGCTAGGA GTGAAGCT CCT AGCTTTAC TGTTTTTATAGTTAT Swoo_0958 1269837 - 1269415 - | CBS domain-containing protein TERM 1171 1269591 - 1269610 + g 72 -7.9 -3.8679 | overlap 1269587 GAAAGTCAGATTCCA TCAAGGG CTGGAT CCCTTGA TTTCGCTCTTTTCTA Swoo_0959 1270018 - 1271787 + | alkaline phosphatase TERM 1172 1271809 - 1271828 + F 100 -13.6 -5.02502 | opp_overlap 1271809 CCTTCGTTCGCTAAA GCCACCTC AGTT GAGGTGGC TTTTTATCTCATGTA TERM 1173 1271828 - 1271809 - f 100 -13.6 -3.53012 | opp_overlap 1271809 CCTTCGTTCGCTAAA GCCACCTC AGTT GAGGTGGC TTTTTATCTCATGTA Swoo_0960 1272027 - 1272593 + | phosphoribosyltransferase TERM 1174 1272625 - 1272654 + T 100 -15.2 -4.65747 | opp_overlap 1272625 1272631, overlap 1272631 CTGATTGGTATAAAA CAAAAAGCCAGC TTAATC GCTGGCTTTTTG TTTTGTTAGAGCTTG TERM 1175 1272654 - 1272625 - T 100 -15.2 -4.38712 | opp_overlap 1272625 1272631, overlap 1272631 CTGATTGGTATAAAA CAAAAAGCCAGC TTAATC GCTGGCTTTTTG TTTTGTTAGAGCTTG TERM 1176 1272631 - 1272648 + T 100 -8.4 -5.62288 | opp_overlap 1272625 1272631, overlap 1272625 GGTATAAAACAAAAA GCCAGC TTAATC GCTGGC TTTTTGTTTTGTTAG TERM 1177 1272648 - 1272631 - T 100 -8.4 -5.54907 | opp_overlap 1272631 1272625, overlap 1272625 GGTATAAAACAAAAA GCCAGC TTAATC GCTGGC TTTTTGTTTTGTTAG Swoo_0961 1272872 - 1272660 - | hypothetical protein Swoo_0962 1275684 - 1273069 - | peptidase M1 membrane alanine aminopeptidase Swoo_0963 1275842 - 1276393 + | phosphodiesterase TERM 1178 1276425 - 1276406 - T 100 -12.2 -5.50499 | opp_overlap 1276406 TGATATTTAAAAAAA TGCCAACC CAAA GGTTGGCA TTTTCAAACTTATCT TERM 1179 1276406 - 1276425 + T 95 -12.2 -4.16251 | opp_overlap 1276406 TGATATTTAAAAAAA TGCCAACC CAAA GGTTGGCA TTTTCAAACTTATCT Swoo_0964 1277050 - 1276457 - | membrane lipoprotein lipid attachment site Swoo_0965 1278440 - 1277073 - | TPR repeat-containing protein Swoo_0966 1278908 - 1278696 - | SlyX family protein Swoo_0967 1279876 - 1278917 - | WD-40 repeat-containing protein TERM 1180 1278971 - 1278985 + g 70 -5.7 -4.41348 | opp_overlap 1278970 1278971 ACTACTGATACTAAT GATCC TATCT GGATC TTTGTTTGCGACAGA TERM 1181 1279258 - 1279268 + g 70 -6.8 -4.08919 | opp_overlap 1279250 CGATAAAGGCATAGT TGCC ACT GGCA TTTAATTTAACCTTT Swoo_0968 1280042 - 1280821 + | peptidylprolyl isomerase FKBP-type TERM 1182 1280845 - 1280860 + F 100 -10.4 -5.46276 | opp_overlap 1280845 TTGTGTGAATTTAAA GGACGC TAAG GCGTCC TTTTTTATGTCTGTT TERM 1183 1280860 - 1280845 - f 83 -10.4 -3.75153 | opp_overlap 1280845 TTGTGTGAATTTAAA GGACGC TAAG GCGTCC TTTTTTATGTCTGTT Swoo_0969 1281092 - 1281466 + | hypothetical protein TERM 1184 1281487 - 1281503 + T 100 -13.7 -3.91412 | opp_overlap 1281487 TAATAAAATGAAAAA GGCAGCG ACT CGCTGCC TTTATACCATGTGCT TERM 1185 1281503 - 1281487 - T 100 -13.7 -5.17786 | opp_overlap 1281487 TAATAAAATGAAAAA GGCAGCG ACT CGCTGCC TTTATACCATGTGCT Swoo_0970 1282157 - 1281528 - | two component LuxR family transcriptional regulator Swoo_0971 1283903 - 1282200 - | integral membrane sensor signal transduction histidine kinase TERM 1186 1282349 - 1282402 + g 78 -8.3 -4.12942 | gap 1 CGCGCTCTTTGAGTT GTTCT-ATACCTACGCCATCATCGCT GAT AGAGATGGTGACATGGGTATCAGAGC TTTTAAAACATTTGA TERM 1187 1285146 - 1285130 - g 72 -9.5 -3.27489 | opp_overlap 1285141, overlap 1285115 1285114 1285126 CTAAGGTGAAAGAGA TTCAGCT TAG AGCTGAA AACCAGCTAGTTAAG Swoo_0972 1284148 - 1285548 + | formate-dependent cytochrome c nitrite reductase, c552 subunit TERM 1188 1285601 - 1285622 + F 100 -13.1 -5.58074 | opp_overlap 1285601 ACCTGCATAGATAAA GCCCTCTTT TCCC AAAGAGGGC TTTTTTTCATCCTTC TERM 1189 1285622 - 1285601 - f 100 -13.1 -4.128 | opp_overlap 1285601 ACCTGCATAGATAAA GCCCTCTTT TCCC AAAGAGGGC TTTTTTTCATCCTTC Swoo_0973 1285847 - 1286257 + | hypothetical protein Swoo_0974 1286369 - 1287013 + | hypothetical protein Swoo_0975 1287063 - 1287476 + | hypothetical protein Swoo_0976 1287552 - 1287887 + | 5-carboxymethyl-2-hydroxymuconate isomerase Swoo_0977 1288188 - 1288628 + | hypothetical protein TERM 1190 1289130 - 1289120 - T 75 -8.2 -3.84246 | overlap 1289121 GTTTCAAGGATGAAA CCGC AGA GCGG CCAAGGATGGCTTCA Swoo_0978 1290001 - 1289459 - | isochorismatase hydrolase Swoo_0979 1290266 - 1290604 + | nitrogen regulatory protein P-II TERM 1191 1290668 - 1290680 + G 74 -2 -5.21709 | overlap 1290645 1290642 AATTAAGGTTTGCGT TAGA TACCT TCTA TTTTTTGATCTCCGG TERM 1192 1291242 - 1291266 + G 75 -4.9 -4.7878 | opp_overlap 1291216, overlap 1291244 1291246 CATTCCTGGTTCTAA CTTGCCTATGG CAA CCTTAGGTATG TTTATTTTATGGATG Swoo_0980 1290613 - 1291866 + | Rh family protein/ammonium transporter TERM 1193 1291901 - 1291919 + F 100 -14.6 -5.72622 | ATGCAAGGTTTCAAT GCCAGCCT TCA AGGCTGGC TTTTTTGTTTCTGAC TERM 1194 1292402 - 1292418 + G 73 -5.1 -4.59773 | CGATGGTGAGGTAAG GTGCG CGCAGGC CGCAC TTTTTAAAGCTGAGA Swoo_0981 1292016 - 1293341 + | DSBA oxidoreductase Swoo_0982 1293394 - 1293741 + | hypothetical protein Swoo_0983 1293847 - 1295055 + | TPR repeat-containing protein TERM 1195 1295081 - 1295101 + T 100 -12.7 -5.40464 | opp_overlap 1295081 CCAATAGGATAAAAA TGCTCCTTA AAA TAAGGAGCA TTTTTGTTTGTCGTG TERM 1196 1295101 - 1295081 - T 100 -12.7 -4.98436 | opp_overlap 1295081 CCAATAGGATAAAAA TGCTCCTTA AAA TAAGGAGCA TTTTTGTTTGTCGTG Swoo_0984 1296426 - 1295137 - | hypothetical protein TERM 1197 1296293 - 1296308 + g 81 -3.2 -5.37171 | opp_overlap 1296277 1296278 TCACCTGTTTGAGGT GCTGCA AGGG TGAAGC TTTTTGTTTGCTGTT Swoo_0985 1297294 - 1296437 - | hypothetical protein TERM 1198 1297606 - 1297619 + H 73 -4.5 -4.9138 | overlap 1297598 TTGCTATCGTTATTA GCGGT TGGT ACTGC TTTTGTTTGGGTGGT Swoo_0986 1298011 - 1299069 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1199 1299083 - 1299112 + T 100 -16.7 -3.31322 | opp_overlap 1299090, overlap 1299090 AAGTTAACATAGATG TAAAAAAGGAGGC TAAT GCCTCCTTTTTTA TTGTCAAACATTGGC TERM 1200 1299090 - 1299105 + T 100 -10.4 -5.55769 | opp_overlap 1299090, overlap 1299083 CATAGATGTAAAAAA GGAGGC TAAT GCCTCC TTTTTTATTGTCAAA TERM 1201 1299105 - 1299090 - T 93 -10.4 -5.14477 | opp_overlap 1299090 1299083 CATAGATGTAAAAAA GGAGGC TAAT GCCTCC TTTTTTATTGTCAAA Swoo_0987 1299313 - 1299137 - | hypothetical protein TERM 1202 1299202 - 1299214 + g 79 -4.1 -5.29782 | CAAATGAAGCAATGA GGTTA TTT TGACC TTTTTTCTGGATATC TERM 1203 1300189 - 1300215 + G 70 -9.4 -2.91276 | overlap 1300188 CTATGTAGCTTTTTC CGTGTTAGCCAC TGA GTGGCGAACAGG CTTTGTGAGGGAAGC Swoo_0988 1299614 - 1301389 + | ABC transporter related Swoo_0989 1301463 - 1301726 + | hypothetical protein Swoo_0990 1301997 - 1301806 - | hypothetical protein Swoo_0991 1302714 - 1302175 - | phosphoglycerate mutase TERM 1204 1302948 - 1302937 - g 72 -3.6 -4.99043 | TGGCGACAAATAAAA CGGC TTAT GCCA GTAGTAAACAGTTGA Swoo_0992 1302831 - 1303421 + | hypothetical protein TERM 1205 1303446 - 1303465 + F 70 -8.6 -3.09648 | overlap 1303450 CTCTGGTTTTGCATA CCAATCGG TATA TCGATTGG TATTACCCTCTCTTA Swoo_0993 1303526 - 1304266 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 1206 1304633 - 1304658 + G 73 -2.5 -5.04385 | TAGGCAGGAGCAGAT GCGAGAGCT AGAGGGAA AGCGTTCGC TTTTTTGGACATCTA Swoo_0994 1304298 - 1304894 + | glutathione S-transferase domain-containing protein Swoo_0995 1305366 - 1304917 - | hypothetical protein TERM 1207 1305257 - 1305288 + g 85 -8 -4.64591 | overlap 1305264 GCCGATTCGGAAATG TGTGTAGGAGCAGC TTTA GCTGCTCTTTTACG TTTTCTATGTGGTTG TERM 1208 1305264 - 1305281 + g 100 -11.3 -4.46854 | overlap 1305257 CGGAAATGTGTGTAG GAGCAGC TTTA GCTGCTC TTTTACGTTTTCTAT TERM 1209 1305379 - 1305391 + H 72 -4.9 -4.84492 | CATATTTTCCTTATA TAAGA GTC TCTTA TTTTATTGTAGTTCG Swoo_0996 1305619 - 1306626 + | extracellular solute-binding protein TERM 1210 1306645 - 1306673 + F 100 -14.7 -5.47399 | opp_overlap 1306645 TTTTTTAGATTAAAA TAGCAGGTCTTAC TTT GTAGGGCCTGCTA TTTTTTTACAATTAA TERM 1211 1306673 - 1306645 - f 87 -10.3 -4.34402 | opp_overlap 1306645 TTTTTTAGATTAAAA TAGCAGGTCTTAC TTT GTAGGGCCTGCTA TTTTTTTACAATTAA Swoo_0997 1306762 - 1308393 + | binding-protein-dependent transport systems inner membrane component Swoo_0998 1308437 - 1309465 + | ABC transporter related TERM 1212 1310008 - 1309993 - g 70 -9 -3.21199 | TAGCCACCAATGGAA TGGCTG CTAC CAGCCA GCCCCTTGCAACCCA TERM 1213 1310963 - 1310978 + G 70 -9 -3.19642 | TAAAAGAGTTGTTGA TGCAGG CCAT CCTGCA TTAATGCATGGTGAT Swoo_0999 1309875 - 1311569 + | gamma-glutamyltransferase Swoo_1000 1311730 - 1312665 + | Dyp-type peroxidase family protein TERM 1214 1312677 - 1312719 + T 100 -26.8 -2.87522 | opp_overlap 1312666 1312690, overlap 1312679 1312690 1312716 TTAATCCTTTATAGC TACCATAAAAAAACGCACCT TAA AGGTGCGTTTTTTTATGGTA TATACTCTACCTTGC TERM 1215 1312679 - 1312717 + T 100 -25 -2.98491 | opp_overlap 1312666 1312690, overlap 1312677 1312690 1312716 AATCCTTTATAGCTA CCATAAAAAAACGCACCT TAA AGGTGCGTTTTTTTATGG TATATACTCTACCTT TERM 1216 1312690 - 1312706 + T 100 -12.3 -5.69473 | opp_overlap 1312690, overlap 1312679 1312677 GCTACCATAAAAAAA CGCACCT TAA AGGTGCG TTTTTTTATGGTATA TERM 1217 1312706 - 1312690 - T 100 -12.3 -5.67063 | opp_overlap 1312690 1312679 1312677 GCTACCATAAAAAAA CGCACCT TAA AGGTGCG TTTTTTTATGGTATA Swoo_1001 1313208 - 1312738 - | arginine repressor, ArgR TERM 1218 1313085 - 1313128 + g 74 -10.6 -2.71791 | gap 1, overlap 1313090 ATACTTTGGATTGGT TGATATTGTTATAGC-CTTCA GCT TGAAGCGCGATAACAATTTCA CTTTGGGAGCCAAAT TERM 1219 1313090 - 1313123 + g 77 -9.1 -3.84451 | gap 1, overlap 1313085 TTGGATTGGTTGATA TTGTTATAGC-CTTCA GCT TGAAGCGCGATAACAA TTTCACTTTGGGAGC TERM 1220 1313222 - 1313253 + H 72 -9 -3.28857 | opp_overlap 1313252 ATAATTTTATTATTC TATATTCAAAAAAC TGAG GTATTTTGAATATA TTAGTCGATTTTGTC Swoo_1002 1313545 - 1314480 + | malate dehydrogenase, NAD-dependent TERM 1221 1314534 - 1314505 - T 90 -12.3 -3.6018 | opp_overlap 1314512, overlap 1314512 GAATACATCAGATAA TAAAAAAGGAGCC TAAC GGCTCCTTTTTTG TACATGGATGTATTT TERM 1222 1314512 - 1314527 + T 100 -10.4 -5.28176 | opp_overlap 1314512 1314505 TCAGATAATAAAAAA GGAGCC TAAC GGCTCC TTTTTTGTACATGGA TERM 1223 1314527 - 1314512 - T 100 -10.4 -5.60689 | opp_overlap 1314512, overlap 1314505 TCAGATAATAAAAAA GGAGCC TAAC GGCTCC TTTTTTGTACATGGA Swoo_1003 1315663 - 1314692 - | polyprenyl synthetase Swoo_1004 1315938 - 1316249 + | ribosomal protein L21 Swoo_1005 1316266 - 1316520 + | ribosomal protein L27 TERM 1224 1316548 - 1316574 + F 100 -17.4 -4.11183 | opp_overlap 1316552, overlap 1316552 GCTAAGATTGCTTAT TAAAGCCCCGCC TTT GGTGGGGCTTTA TTGTTTATGGTAAAA TERM 1225 1316552 - 1316570 + F 100 -13.8 -4.63952 | opp_overlap 1316552, overlap 1316548 AGATTGCTTATTAAA GCCCCGCC TTT GGTGGGGC TTTATTGTTTATGGT TERM 1226 1316570 - 1316552 - f 86 -11.6 -3.73402 | opp_overlap 1316548 1316552 AGATTGCTTATTAAA GCCCCGCC TTT GGTGGGGC TTTATTGTTTATGGT Swoo_1006 1316654 - 1317823 + | GTP-binding protein Obg/CgtA Swoo_1007 1317874 - 1318635 + | hypothetical protein Swoo_1008 1318632 - 1319102 + | hypothetical protein Swoo_1009 1319162 - 1319644 + | dihydrofolate reductase Swoo_1010 1319746 - 1320132 + | hypothetical protein TERM 1227 1320162 - 1320204 + T 100 -16.7 -3.57792 | gap 1, opp_overlap 1320173, overlap 1320173 ATCGATTGATATTAA G-CGTAAAAAAATACCGGAC ATCT GTCCGGTATTTTTTTATGTC TTTAGCGGTAGATAA TERM 1228 1320192 - 1320173 - T 100 -12.2 -5.47399 | opp_overlap 1320162 1320173 TTAAGCGTAAAAAAA TACCGGAC ATCT GTCCGGTA TTTTTTTATGTCTTT TERM 1229 1320173 - 1320192 + T 100 -12.2 -5.82281 | opp_overlap 1320173, overlap 1320162 TTAAGCGTAAAAAAA TACCGGAC ATCT GTCCGGTA TTTTTTTATGTCTTT TERM 1230 1320241 - 1320222 - T 83 -8 -4.53303 | opp_overlap 1320221 TAGCGGTAGATAAAA TTTATACC AATC GGTATAAA CCTCTCTTTCTCTAT Swoo_1011 1322284 - 1320257 - | methyl-accepting chemotaxis sensory transducer TERM 1231 1322386 - 1322400 + r 91 -7.2 -5.23016 | overlap 1322373 TATCGACCATTGCTC GAGTTA GTT TAACTC TTTTTTAACTTGTTT Swoo_1012 1323218 - 1322394 - | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Swoo_1013 1323721 - 1323341 - | ApaG domain-containing protein TERM 1232 1323738 - 1323761 + r 70 -5.2 -4.62002 | opp_overlap 1323742, overlap 1323740 1323742 GCGTTCCTTTTTTAA AAAAGGAGGG CAAG CCCTCCTCTG TTTTGTGTGATTACT TERM 1233 1323740 - 1323759 + r 74 -7.8 -3.91421 | opp_overlap 1323742, overlap 1323738 1323742 GTTCCTTTTTTAAAA AAGGAGGG CAAG CCCTCCTC TGTTTTGTGTGATTA TERM 1234 1323757 - 1323742 - R 93 -10.4 -5.00616 | opp_overlap 1323740 1323738 1323742 TCCTTTTTTAAAAAA GGAGGG CAAG CCCTCC TCTGTTTTGTGTGAT TERM 1235 1323742 - 1323757 + r 81 -10.4 -3.52764 | opp_overlap 1323742, overlap 1323740 1323738 TCCTTTTTTAAAAAA GGAGGG CAAG CCCTCC TCTGTTTTGTGTGAT Swoo_1014 1324604 - 1323801 - | dimethyladenosine transferase Swoo_1015 1325602 - 1324616 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1236 1325503 - 1325533 + g 93 -15.4 -3.08133 | opp_overlap 1325506 GATCCGCACAAACAA CAAGCTCAGCAGGC CAA GCCTGCTGAGCGAG TTGGATAACTAAATC TERM 1237 1325530 - 1325506 - G 100 -20.1 -4.15703 | opp_overlap 1325503 CCGCACAAACAACAA GCTCAGCAGGC CAA GCCTGCTGAGC GAGTTGGATAACTAA Swoo_1016 1326986 - 1325682 - | SurA domain-containing protein TERM 1238 1327013 - 1327043 + r 95 -12.7 -3.7821 | gap 1, opp_overlap 1327012 1327011 CTTGGCATATTAATG TCAGGTGCAGCGCC AAAT GGCGCTG-ACTTGA TTCTATTATCATGGT Swoo_1017 1329457 - 1327136 - | organic solvent tolerance protein TERM 1239 1329061 - 1329081 + g 80 -11.1 -3.40052 | opp_overlap 1329059, overlap 1329060 CGTGCAGCCAATACT GTGCACCCC AAA GGGATGCAC TATTGTTACGCATCT TERM 1240 1329571 - 1329589 + H 86 -9 -4.65895 | TTAGCTGATTCCATT TTGCTTTA TAA TAAAGCAA TTTTTACATAAGAGC TERM 1241 1330113 - 1330126 + G 80 -6.7 -4.80167 | opp_overlap 1330113 1330111 AAAAGACTCAAAATA TGCTG AAGA CAGCA TTTTCCTTTTTGATA Swoo_1018 1329611 - 1330615 + | aminoglycoside phosphotransferase Swoo_1019 1330612 - 1331301 + | nucleotidyl transferase TERM 1242 1331283 - 1331310 + F 70 -7.1 -3.75437 | TATGTTAGAGAAGCG CCAACGAGATT TAGTCT AATCTCCTTGG TTTAGTCCAGTAATT Swoo_1020 1331370 - 1332149 + | heat shock protein DnaJ domain-containing protein Swoo_1021 1332288 - 1332941 + | hypothetical protein Swoo_1022 1332969 - 1333931 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1243 1333970 - 1333994 + F 79 -6.4 -4.7373 | opp_overlap 1333969 1333970, overlap 1333973 GGGATTGATAACAAT GGACTTTCCT AACAA GGGAAAGCCC TTTTTAGTGGAGTAA TERM 1244 1334164 - 1334129 - f 72 -5.6 -4.66002 | overlap 1334158 1334160 TATTAATAAAAACAA GGATCTATTTATTAGT ATAA AGCGATAAATAGATCC TAAGGAGCCAGCTGT Swoo_1023 1334178 - 1334576 + | hypothetical protein Swoo_1024 1334578 - 1335714 + | secretion protein HlyD family protein TERM 1245 1335721 - 1335745 + F 83 -10.8 -3.70019 | overlap 1335719 1335724 TTCCACTAGTCTGTT TAAGGCCATC AAAAA GGTGGCCTTA TCTTTTACAGTTCGT TERM 1246 1335724 - 1335742 + F 77 -8.1 -3.97108 | overlap 1335721 1335719 CACTAGTCTGTTTAA GGCCATC AAAAA GGTGGCC TTATCTTTTACAGTT Swoo_1025 1335781 - 1337250 + | ATPase central domain-containing protein TERM 1247 1337297 - 1337264 - T 74 -9.6 -3.21218 | opp_overlap 1337264 1337266 AGCTGTTAGCATGAA TCGAGGAGTTAGCC TATGTT GGCTATCTCCTCTA TTTTTAAGGGTTAAA TERM 1248 1337264 - 1337297 + T 88 -9.6 -4.62471 | opp_overlap 1337264, overlap 1337266 AGCTGTTAGCATGAA TCGAGGAGTTAGCC TATGTT GGCTATCTCCTCTA TTTTTAAGGGTTAAA TERM 1249 1337266 - 1337295 + T 95 -12.2 -3.92577 | opp_overlap 1337264, overlap 1337264 CTGTTAGCATGAATC GAGGAGTTAGCC TATGTT GGCTATCTCCTC TATTTTTAAGGGTTA Swoo_1026 1338561 - 1337308 - | glycerophosphoryl diester phosphodiesterase TERM 1250 1338705 - 1338724 + r 100 -12.2 -4.93968 | GACTAGGTGGTGATG GGGAGATC TTGA GATCTCCC TTTTTGGTTATGACT Swoo_1027 1339285 - 1338746 - | hypothetical protein Swoo_1028 1339449 - 1339760 + | hypothetical protein Swoo_1029 1341039 - 1339777 - | integral membrane sensor signal transduction histidine kinase TERM 1251 1340625 - 1340613 - G 73 -9.1 -3.53722 | overlap 1340623 GCCATACCCAGATAA GGGCT ATA AGCCC TAAAGAGAGGTAGAA TERM 1252 1340919 - 1340939 + g 83 -12.6 -3.09135 | opp_overlap 1340919 GTGCCAGCGCAATGA GCGGTGCA TCCAT TGCACCGC TATCTTCGACATTGT TERM 1253 1340939 - 1340919 - G 82 -12.6 -2.73364 | opp_overlap 1340919 GTGCCAGCGCAATGA GCGGTGCA TCCAT TGCACCGC TATCTTCGACATTGT Swoo_1030 1341794 - 1341081 - | two component transcriptional regulator Swoo_1031 1342207 - 1341794 - | hypothetical protein Swoo_1032 1343088 - 1342210 - | MltA-interacting MipA family protein TERM 1254 1344212 - 1344226 + G 76 -7.8 -4.2717 | ATTGCCTGGGGAGCA CTTGGC GCT GCCGAG TTTTGCTGGCATGGT Swoo_1033 1343441 - 1344616 + | acyl-CoA dehydrogenase domain-containing protein TERM 1255 1344629 - 1344643 + F 100 -11.4 -5.79595 | opp_overlap 1344629 TAACGTGAATATTAA GGAGCC TAA GGCTCC TTTTTTGTTTTCAGC TERM 1256 1344643 - 1344629 - f 84 -11.4 -3.37959 | opp_overlap 1344629 TAACGTGAATATTAA GGAGCC TAA GGCTCC TTTTTTGTTTTCAGC TERM 1257 1344665 - 1344684 + F 90 -12.2 -3.44319 | opp_overlap 1344665 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 1258 1344684 - 1344665 - f 90 -12.2 -3.57144 | opp_overlap 1344665 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG Swoo_1034 1344768 - 1345202 + | transposase IS200-family protein TERM 1259 1345225 - 1345207 - f 80 -10.2 -3.60214 | opp_overlap 1345219, overlap 1345208 ATTTGAAGTAGATAA CGCCCCCT TTT AGGGGGCT AATACAAAGCCACCT TERM 1260 1345224 - 1345208 - f 93 -13.7 -2.75647 | opp_overlap 1345219, overlap 1345207 TTTGAAGTAGATAAC GCCCCCT TTT AGGGGGC TAATACAAAGCCACC TERM 1261 1345255 - 1345234 - f 79 -8.7 -4.1891 | opp_overlap 1345219 1345234 1345235, overlap 1345235 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTTGAAAT TERM 1262 1345234 - 1345255 + F 79 -8.7 -4.08651 | opp_overlap 1345234 1345235, overlap 1345219 1345235 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTTGAAAT TERM 1263 1345254 - 1345235 - f 87 -12.2 -3.11024 | opp_overlap 1345219 1345234 1345235, overlap 1345234 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTTGAAA TERM 1264 1345235 - 1345254 + F 87 -12.2 -3.04468 | opp_overlap 1345235 1345234, overlap 1345219 1345234 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTTGAAA Swoo_1035 1345334 - 1347577 + | transketolase central region Swoo_1036 1347582 - 1348652 + | (acyl-carrier-protein) S-malonyltransferase Swoo_1037 1351138 - 1348757 - | PAS/PAC sensor hybrid histidine kinase Swoo_1038 1352409 - 1351267 - | response regulator receiver protein Swoo_1039 1352791 - 1352399 - | Hpt protein TERM 1265 1352621 - 1352642 + g 72 -5.9 -4.50058 | TAAGTAATGAGCCTC CTCTTTTAC AGCT GTGAAGGAG TTTTGGTTATACATA Swoo_1040 1355243 - 1352784 - | PAS/PAC sensor hybrid histidine kinase Swoo_1041 1356376 - 1355480 - | UspA domain-containing protein Swoo_1042 1357017 - 1356544 - | hypothetical protein TERM 1266 1356933 - 1356970 + g 78 -5.8 -5.02502 | overlap 1356936 ACTGAAGGGTTCTAT CTTCTGTCACTGA-TGCT TCGA AGCACTCAGTGA-AGTAG TTTTTATCTAATATG TERM 1267 1357098 - 1357118 + H 71 -3.9 -4.86621 | TTTCTCTGATCTCCA TCTACACTG AAA CTGTGTCGA TTTTTAGTTAAGGCT Swoo_1043 1357138 - 1357455 + | hypothetical protein Swoo_1044 1357993 - 1358241 + | hypothetical protein Swoo_1045 1358772 - 1358353 - | glyoxalase/bleomycin resistance protein/dioxygenase Swoo_1046 1359189 - 1358800 - | glyoxalase/bleomycin resistance protein/dioxygenase Swoo_1047 1359836 - 1359204 - | NADPH-dependent FMN reductase Swoo_1048 1359984 - 1360607 + | putative transcriptional regulator Swoo_1049 1360610 - 1361320 + | pseudouridine synthase TERM 1268 1361438 - 1361448 + F 73 -4 -5.07971 | TGGGCACTTATGTGA TGAA TGA TTCA TTTTTGGTTGTTTTG Swoo_1050 1361636 - 1362247 + | GPR1/FUN34/yaaH family protein TERM 1269 1362283 - 1362300 + F 100 -11.3 -5.93252 | opp_overlap 1362283 TAAACTATTAAAAAA GCTGGCA TAAA TGCCAGC TTTTTTGTTTTTAAA TERM 1270 1362300 - 1362283 - f 100 -11.3 -5.243 | opp_overlap 1362283 TAAACTATTAAAAAA GCTGGCA TAAA TGCCAGC TTTTTTGTTTTTAAA Swoo_1051 1362463 - 1364478 + | diguanylate phosphodiesterase TERM 1271 1364492 - 1364528 + T 76 -10.3 -2.68014 | opp_overlap 1364497 1364503, overlap 1364503 1364526 AAGTAGATACATCGA TTAAGTAAAAAGGGGCG TTA TGCCCCTTTTCAATTAA CTTAGTTACTTAGTT TERM 1272 1364523 - 1364497 - T 80 -11.7 -2.52491 | opp_overlap 1364492 1364503, overlap 1364503 GATACATCGATTAAG TAAAAAGGGGC GTTAT GCCCCTTTTCA ATTAACTTAGTTACT TERM 1273 1364503 - 1364517 + T 85 -9.2 -4.29845 | opp_overlap 1364497 1364503, overlap 1364492 TCGATTAAGTAAAAA GGGGCG TTA TGCCCC TTTTCAATTAACTTA TERM 1274 1364517 - 1364503 - T 90 -8.5 -4.90266 | opp_overlap 1364503 1364492, overlap 1364497 TCGATTAAGTAAAAA GGGGC GTTAT GCCCC TTTTCAATTAACTTA Swoo_1052 1366142 - 1364610 - | major facilitator transporter Swoo_1053 1366367 - 1366933 + | GCN5-related N-acetyltransferase TERM 1275 1366940 - 1366958 + T 100 -14.6 -4.43815 | opp_overlap 1366940 AGAGGTTAACAAGAA TGAGGGGC ATA GCCCCTCA TTTTACTCTGTTACT TERM 1276 1366958 - 1366940 - T 100 -14.6 -3.96469 | opp_overlap 1366940 AGAGGTTAACAAGAA TGAGGGGC ATA GCCCCTCA TTTTACTCTGTTACT Swoo_1054 1369962 - 1366987 - | hypothetical protein TERM 1277 1368246 - 1368269 + g 79 -6.8 -4.67353 | overlap 1368247 GGGTTGAAGCAGATC TTTGGGTGTT GATA AATACCCAAG TTTTTACATCACTGC TERM 1278 1370117 - 1370093 - R 70 -8.1 -3.37796 | opp_overlap 1370093 1370095 1370100, overlap 1370100 CGGCAGGAGGGATAA CATAAAATTTA ATA TAAATCTTATG CTTAGTGGTTCAAGG Swoo_1055 1371954 - 1370158 - | diguanylate cyclase TERM 1279 1371601 - 1371611 + g 73 -4.6 -4.73864 | AGCGTTATCGGCTCG GTGC AGT GCGC TTTTCTGTTCATTCG Swoo_1056 1372738 - 1372127 - | AMMECR1 domain-containing protein TERM 1280 1372682 - 1372696 + g 89 -8.6 -4.7254 | opp_overlap 1372681 1372682 1372692 GGTGTCCCTTGAAAG TCTCAG TAA CTGAGA TTTTTCCTCAAAGGT Swoo_1057 1373522 - 1372716 - | hypothetical protein Swoo_1058 1373583 - 1374731 + | radical SAM domain-containing protein TERM 1281 1374769 - 1374752 - T 93 -9.8 -5.06414 | opp_overlap 1374752 TGCGCGTAATAAAAA GGCGGC TCAATG GCCGCC TTTTTTGCTCTGTCT TERM 1282 1374752 - 1374769 + T 100 -10.5 -5.25893 | opp_overlap 1374752 TGCGCGTAATAAAAA GGCGGCT CAAT GGCCGCC TTTTTTGCTCTGTCT Swoo_1059 1377716 - 1374816 - | valyl-tRNA synthetase TERM 1283 1376334 - 1376362 + g 77 -8.9 -3.72576 | overlap 1376339 AAGCACGATAGAATC GTCAAGTTTGTGC TTA GCACGAACTTCGC TTTCATCACGGCCAA TERM 1284 1376339 - 1376357 + g 74 -9.6 -3.30701 | overlap 1376334 CGATAGAATCGTCAA GTTTGTGC TTA GCACGAAC TTCGCTTTCATCACG Swoo_1060 1378202 - 1377732 - | DNA polymerase III chi subunit HolC TERM 1285 1377807 - 1377824 + g 70 -6.9 -4.05747 | TCGATACTGCCTATA GCGCTCG CGGG CGATCGC TTTATGTCCAGTATC Swoo_1061 1379469 - 1378786 - | hypothetical protein Swoo_1062 1380010 - 1379615 - | hypothetical protein TERM 1286 1379930 - 1379951 + g 93 -5.3 -5.53079 | gap 1, overlap 1379930 CTCCAAAAGCGATAG CCC-ATAAAT AGG ATTTATAGGG TTTTTTCTCTCTTTT TERM 1287 1380041 - 1380078 + r 81 -10.7 -3.54307 | opp_overlap 1380032 CTAACATTTGTATAG TGTGCATGTGCGTAT ACTTGGCA AAACGCGCATGCACA TTTAACAAACCTATT TERM 1288 1380506 - 1380490 - R 78 -9.5 -3.54984 | AGCAATAAACAGCAA TGAAGGT TAG ACCTTCA GACACATTCCCAATA TERM 1289 1380589 - 1380608 + r 89 -6.4 -5.38549 | overlap 1380591 GGCCCACCTTCTCGC CACCAAAC AGAT GTTTGGCG TTTTTGTTGTTTGAA Swoo_1063 1382337 - 1380934 - | KAP P-loop domain-containing protein TERM 1290 1381365 - 1381404 + g 91 -8.8 -5.09426 | opp_overlap 1381364 1381365 ATTGGATGACCAAAT TTATCTTTGCGAAAAGTT GTTC AACTTCACGTAAAGATAA TTTTTTAGCATTAGC TERM 1291 1382833 - 1382823 - g 80 -5.4 -5.10154 | AGGTAAAACCAAAAA CGAT AAA ATCG ACTCCTTTAAAATAG TERM 1292 1383557 - 1383539 - g 77 -3.1 -5.26119 | opp_overlap 1383539 TGCTGAAAAACAAAA CGGTGTT TGATG AACAACG ATTTTTGAAAGGATA Swoo_1064 1382530 - 1383573 + | transposase IS116/IS110/IS902 family protein TERM 1293 1384016 - 1383995 - T 78 -9.5 -3.6682 | opp_overlap 1383994 GTTGATTGATTTAAA TTTGACTGC ACAA GCAGCCAAA CTAGTTAAGCTCGCC Swoo_1065 1384648 - 1384073 - | hypothetical protein TERM 1294 1385961 - 1385945 - H 77 -9.5 -3.50335 | GGCGATAAACAGCAA TGAAGGT ACG ACCTTCA GACACATTCCCAATA Swoo_1066 1386217 - 1386579 + | hypothetical protein TERM 1295 1386590 - 1386643 + T 90 -11.3 -4.67635 | opp_overlap 1386606, overlap 1386606 AATAATTTCGAATGC CACAGTTATTTAAAAAGGTTAGTGA TAAC TCGCTAACCTTTTTTATTGAGTGTG TTTTCTAGTTTTACA TERM 1296 1386606 - 1386627 + T 100 -9.5 -5.49234 | opp_overlap 1386606, overlap 1386590 ACAGTTATTTAAAAA GGTTAGTGA TAAC TCGCTAACC TTTTTTATTGAGTGT TERM 1297 1386627 - 1386606 - T 79 -7.3 -4.67755 | opp_overlap 1386606 1386590 ACAGTTATTTAAAAA GGTTAGTGA TAAC TCGCTAACC TTTTTTATTGAGTGT Swoo_1067 1387001 - 1386711 - | hypothetical protein TERM 1298 1386951 - 1386937 - G 72 -5.6 -4.51378 | opp_overlap 1386940, overlap 1386939 ATGCAGAGGACAAAA CTTCCC GCA GGGATG CGAGGTTGCATACTG Swoo_1068 1387547 - 1387047 - | superoxide dismutase, Ni Swoo_1069 1387754 - 1387551 - | hypothetical protein Swoo_1070 1388495 - 1388091 - | hypothetical protein TERM 1299 1389089 - 1389131 + H 81 -9.6 -3.87373 | gap 1, opp_overlap 1389083 TACTTAAATGTGATG GTGAGC-TTAATTTTATAC CTCTTT GTATAAAATTAATGCTTAC TTTCTCGCAGCTATA TERM 1300 1389603 - 1389617 + G 74 -4.2 -5.00765 | TATATAGCGCTATTT CAACCA CCT TGGCTG TTTTTCTCCTTCATT Swoo_1071 1389170 - 1390960 + | ATPase central domain-containing protein TERM 1301 1390972 - 1390998 + T 95 -13.7 -3.12668 | TTAATCGCTTTTCCT GCGCCTATGGG GGTAA CCCTTAGGCGC TATTGCGATTTAGGG Swoo_1072 1392059 - 1391109 - | AraC family transcriptional regulator Swoo_1073 1392140 - 1392769 + | cytochrome P460 TERM 1302 1393021 - 1393008 - g 83 -3.7 -5.42259 | opp_overlap 1393017 GTACTTCCAAAAAAA CGGTG TTTT CCCCG ATGGCGCGGTTTTGG Swoo_1074 1392769 - 1393320 + | cytochrome c, class I TERM 1303 1393339 - 1393366 + F 73 -8.4 -3.65351 | overlap 1393342 1393345 CAAGCGTCTATGTTT TAAGTCGGGCTC GAAA GAGCCCCTCTTA TTTAGATAAGAATAA TERM 1304 1393345 - 1393360 + F 76 -10.4 -2.73829 | overlap 1393342 1393339 TCTATGTTTTAAGTC GGGCTC GAAA GAGCCC CTCTTATTTAGATAA TERM 1305 1393706 - 1393726 + G 73 -6.2 -4.31697 | overlap 1393703 1393719 TAATGCTGTGATTAT CTTGTTTC TGATC GGAACAAG TTGTTTCTTCTCTAT Swoo_1075 1393677 - 1395008 + | hypothetical protein TERM 1306 1395049 - 1395013 - T 95 -13.4 -2.91695 | gap 1, opp_overlap 1395021, overlap 1395021 CTCAGGCTTAAATCA TA-AAAAAAGGTGAAGC CGTA GCTTCACCTTTTTTATA CAAGATGTAAAAACT TERM 1307 1395021 - 1395040 + T 100 -12.2 -5.24531 | opp_overlap 1395021 1395013 TAAATCATAAAAAAA GGTGAAGC CGTA GCTTCACC TTTTTTATACAAGAT TERM 1308 1395040 - 1395021 - T 100 -12.2 -5.75599 | opp_overlap 1395021, overlap 1395013 TAAATCATAAAAAAA GGTGAAGC CGTA GCTTCACC TTTTTTATACAAGAT TERM 1309 1395082 - 1395063 - T 71 -4.2 -4.76312 | opp_overlap 1395056 1395063, overlap 1395056 TACAAGATGTAAAAA CTGGGACC TATT AGTCACAG TTTTACTTATCTCTA Swoo_1076 1396603 - 1395095 - | leucyl aminopeptidase TERM 1310 1396770 - 1396758 - H 72 -6.3 -4.43571 | overlap 1396749 ACAAAACTACCAAAA GTAGA CAG TCTAC ATGAAAGTTTGACTG Swoo_1077 1396826 - 1397938 + | permease YjgP/YjgQ family protein Swoo_1078 1397935 - 1398993 + | permease YjgP/YjgQ family protein Swoo_1079 1399698 - 1399174 - | RDD domain-containing protein Swoo_1080 1400015 - 1399761 - | hypothetical protein Swoo_1081 1400554 - 1400072 - | GCN5-related N-acetyltransferase Swoo_1082 1402084 - 1400594 - | carboxypeptidase Taq TERM 1311 1402464 - 1402476 + G 70 -9.1 -3.19255 | CAGCTTCTGGTTTTA CCGGA GTA TCCGG TTGGCTGTGTCTTAA Swoo_1083 1402283 - 1402918 + | hypothetical protein Swoo_1084 1402950 - 1404764 + | band 7 protein TERM 1312 1404830 - 1404807 - T 72 -9.6 -2.76263 | opp_overlap 1404812, overlap 1404812 TTTAGCATTCAAGTA GAAAAGCGCC TTAG GGCGCTTTTT TTGTTTAGTGGTAAA TERM 1313 1404812 - 1404825 + T 100 -9.5 -5.99154 | opp_overlap 1404807 1404812 CATTCAAGTAGAAAA GCGCC TTAG GGCGC TTTTTTTGTTTAGTG TERM 1314 1404825 - 1404812 - T 88 -9.5 -4.55491 | opp_overlap 1404812, overlap 1404807 CATTCAAGTAGAAAA GCGCC TTAG GGCGC TTTTTTTGTTTAGTG Swoo_1085 1405428 - 1404886 - | hypothetical protein TERM 1315 1405369 - 1405382 + g 74 -2.3 -5.26918 | TTGAAACCATTCCTC CAGTG TTTT CCCTG TTTTTTCTGGCATGT Swoo_1086 1406402 - 1405434 - | hypothetical protein Swoo_1087 1406928 - 1406443 - | hypothetical protein Swoo_1088 1407374 - 1407033 - | hypothetical protein Swoo_1089 1407974 - 1407567 - | hypothetical protein Swoo_1090 1408343 - 1408005 - | hypothetical protein Swoo_1091 1408891 - 1408439 - | hypothetical protein Swoo_1092 1409470 - 1409090 - | hypothetical protein TERM 1316 1409165 - 1409150 - G 70 -6.1 -4.21319 | opp_overlap 1409149, overlap 1409140 AGCAACCTTAAGAAA CGGCT CAGCCC AGCCG CTACTTAAGCTGAGC TERM 1317 1409966 - 1409951 - R 70 -9 -3.20361 | AAAAGGTTAATCTAA GCCTTC ATTC GAAGGC CAATACAGTTCAGGA Swoo_1093 1410627 - 1409995 - | hypothetical protein Swoo_1094 1411365 - 1410727 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1318 1411468 - 1411448 - R 100 -12.6 -4.88736 | TAGCAGGTACAAAAA TGCCGCTC ATGGG GAGCGGCA TCGATAGTAAAGCGG Swoo_1095 1412800 - 1411502 - | DEAD/DEAH box helicase domain-containing protein TERM 1319 1412240 - 1412253 + g 74 -2.3 -5.19916 | opp_overlap 1412237, overlap 1412241 CGAAGATGAGAAGGT GGCTG AAAA CAGCA TTTTTTGGCTGTTTT TERM 1320 1413082 - 1413049 - R 82 -8.1 -4.32049 | overlap 1413050 TATAATGCAGTAAAA CTCCGGGAGACTG CGTCGTTT CAGCCCCCCGGAT TAGCCTTGACTAGAT TERM 1321 1413081 - 1413050 - R 83 -11.6 -3.18506 | overlap 1413049 ATAATGCAGTAAAAC TCCGGGAGACTG CGTCGTTT CAGCCCCCCGGA TTAGCCTTGACTAGA Swoo_1096 1414879 - 1413092 - | peptidase M24 Swoo_1097 1415129 - 1416319 + | major facilitator transporter Swoo_1098 1416485 - 1417264 + | ROK family protein Swoo_1099 1417459 - 1418676 + | peptidase M24 TERM 1322 1418697 - 1418729 + F 90 -11.5 -4.0031 | opp_overlap 1418702 ATATTCTTACCTGCA GATAAGGCATCTA AATCCAG TGGATGCCTTATC TTGTTTCATACCGAT TERM 1323 1418921 - 1418904 - f 73 -8.5 -3.55946 | overlap 1418902 1418911 CTATCCTAAATAACA GATGACA GCGT TGTCATC CAAAGCAGTAACTTG Swoo_1100 1419210 - 1421801 + | glycoside hydrolase family protein TERM 1324 1421820 - 1421840 + F 90 -11.2 -4.50193 | opp_overlap 1421819 1421822 ATCACTTCCATTAAG TAGGGGGA TCACT TCCCCCTA TTTTCCTTCCTTACT TERM 1325 1421838 - 1421822 - f 72 -9.4 -2.78216 | opp_overlap 1421820, overlap 1421819 CACTTCCATTAAGTA GGGGGA TCACT TCCCCC TATTTTCCTTCCTTA TERM 1326 1422192 - 1422210 + G 80 -6 -4.87626 | overlap 1422181 GAGTCTGTGTTGAGT GAAACACA GTT TGAGTTTC TTTTTCCTGTTCGCG Swoo_1101 1421949 - 1423646 + | chitinase TERM 1327 1423696 - 1423668 - T 100 -14.7 -4.11216 | opp_overlap 1423674, overlap 1423669 1423674 TCTTTATTGTTAAAA TTAAAACGCGCCT TAG AGGCGCGTTTTAC ATCTTGGATAGCGTG TERM 1328 1423695 - 1423669 - T 100 -18.2 -3.06515 | opp_overlap 1423674, overlap 1423668 1423674 CTTTATTGTTAAAAT TAAAACGCGCCT TAG AGGCGCGTTTTA CATCTTGGATAGCGT TERM 1329 1423674 - 1423690 + T 100 -13.7 -4.28656 | opp_overlap 1423669 1423668 1423674 TTGTTAAAATTAAAA CGCGCCT TAG AGGCGCG TTTTACATCTTGGAT TERM 1330 1423690 - 1423674 - T 100 -13.7 -4.67038 | opp_overlap 1423674, overlap 1423669 1423668 TTGTTAAAATTAAAA CGCGCCT TAG AGGCGCG TTTTACATCTTGGAT Swoo_1102 1424191 - 1423721 - | peptidylprolyl isomerase FKBP-type Swoo_1103 1424922 - 1424311 - | cold-shock DNA-binding domain-containing protein Swoo_1104 1425468 - 1425010 - | putative lipoprotein TERM 1331 1425923 - 1425947 + G 79 -9.3 -3.8969 | opp_overlap 1425922 1425923 1425930, overlap 1425924 ATTAATCGTTAGAAC GGCAAAAGGCG CAG CGCTTTTTGCA TTGTTATCTGAGTCA TERM 1332 1425924 - 1425946 + G 82 -12.8 -2.93332 | opp_overlap 1425923 1425922 1425930, overlap 1425923 TTAATCGTTAGAACG GCAAAAGGCG CAG CGCTTTTTGC ATTGTTATCTGAGTC Swoo_1105 1425636 - 1426067 + | MarR family transcriptional regulator TERM 1333 1426114 - 1426089 - T 85 -9.8 -4.08221 | opp_overlap 1426089 CTTAATACAATGAAA TATTCCGGCC CTGCAT GACCGGAATA TTAATCTAAAAAAAC Swoo_1106 1426648 - 1426169 - | hypothetical protein Swoo_1107 1426851 - 1427798 + | hypothetical protein Swoo_1108 1427803 - 1428018 + | hypothetical protein TERM 1334 1428040 - 1428061 + T 83 -8.7 -4.25458 | opp_overlap 1428043, overlap 1428043 TTTGAATTAACGAAA AAAGGTGGC TTAT GCCACCTTA TTTATTGATAGCGTT TERM 1335 1428058 - 1428043 - T 100 -10.4 -5.32565 | opp_overlap 1428040 1428043 GAATTAACGAAAAAA GGTGGC TTAT GCCACC TTATTTATTGATAGC TERM 1336 1428043 - 1428058 + T 87 -10.4 -4.24413 | opp_overlap 1428043, overlap 1428040 GAATTAACGAAAAAA GGTGGC TTAT GCCACC TTATTTATTGATAGC Swoo_1109 1428419 - 1428075 - | hypothetical protein Swoo_1110 1428535 - 1428717 + | hypothetical protein TERM 1337 1428733 - 1428762 + T 74 -10.1 -2.8632 | opp_overlap 1428734 1428741, overlap 1428741 TGGCAATAGAATTCA ATAAAAAACCGCC TGAT GGCGGTTTTTTGA TCTAATGCTCTGTTA TERM 1338 1428761 - 1428734 - T 84 -11.4 -3.29147 | opp_overlap 1428733 1428741, overlap 1428741 GGCAATAGAATTCAA TAAAAAACCGCC TGAT GGCGGTTTTTTG ATCTAATGCTCTGTT TERM 1339 1428754 - 1428741 - T 100 -9.5 -5.5074 | opp_overlap 1428741 1428733, overlap 1428734 GAATTCAATAAAAAA CCGCC TGAT GGCGG TTTTTTGATCTAATG TERM 1340 1428741 - 1428754 + T 100 -9.5 -5.23316 | opp_overlap 1428734 1428741, overlap 1428733 GAATTCAATAAAAAA CCGCC TGAT GGCGG TTTTTTGATCTAATG Swoo_1111 1429511 - 1428789 - | hypothetical protein TERM 1341 1429326 - 1429315 - G 70 -5.8 -4.3255 | overlap 1429311 GCTCCAAGGAAGAAA CCAC TGTC GTGG CTCCAATCAACGCCT TERM 1342 1429545 - 1429559 + r 83 -7.8 -4.54821 | opp_overlap 1429544 1429556, overlap 1429546 CTTTATTGTATGAAC TCCCTG TAA CAGGGG TTTTATGGTTACCAT TERM 1343 1429546 - 1429558 + r 72 -9.1 -3.3217 | opp_overlap 1429544 1429556, overlap 1429545 TTTATTGTATGAACT CCCTG TAA CAGGG GTTTTATGGTTACCA Swoo_1112 1430023 - 1429661 - | protein of unknown function DUF861 cupin_3 TERM 1344 1430087 - 1430063 - R 100 -14.4 -4.15396 | opp_overlap 1430060 1430056, overlap 1430066 TTGTAAATGAAATAA CAATGCGCAG ACTCG CTGCGCATTG GAGATATCTTCTATT TERM 1345 1430084 - 1430066 - R 85 -10.3 -4.18294 | opp_overlap 1430060 1430056, overlap 1430063 TAAATGAAATAACAA TGCGCAG ACTCG CTGCGCA TTGGAGATATCTTCT Swoo_1113 1431588 - 1430098 - | methylmalonate-semialdehyde dehydrogenase TERM 1346 1431643 - 1431615 - R 73 -8.2 -3.62046 | opp_overlap 1431616 1431639, overlap 1431616 CTATCGTCTTAATAA TCTCATCCCCAA GCTGG TTGGAGATGAGT TAGATTCATTGTGTT TERM 1347 1431616 - 1431642 + r 75 -9.5 -3.25758 | opp_overlap 1431615 1431616, overlap 1431639 TATCGTCTTAATAAT CTCATCCCCAA GCTGG TTGGAGATGAG TTAGATTCATTGTGT TERM 1348 1431642 - 1431616 - R 81 -11.7 -2.77013 | opp_overlap 1431616 1431639, overlap 1431615 TATCGTCTTAATAAT CTCATCCCCAA GCTGG TTGGAGATGAG TTAGATTCATTGTGT Swoo_1114 1433039 - 1431702 - | aminotransferase class-III TERM 1349 1431804 - 1431821 + g 71 -8.3 -3.53224 | GATAATATCTGCAGT GGCTCGC ACTA GCGTGCC TTTGGCAAAACACTC TERM 1350 1434194 - 1434178 - g 100 -11.5 -4.59773 | opp_overlap 1434180 1434181, overlap 1434182 CCGGATCTTCAAAAA GCAGCGG AAG CCGCCGC AACGGCTATCGCCTT Swoo_1115 1433311 - 1434819 + | aldehyde dehydrogenase TERM 1351 1434877 - 1434931 + T 100 -28.3 -2.59748 | gap 1, opp_overlap 1434888 1434893, overlap 1434888 1434893 TTTCAGCTATTAGGT GT-ACCCATACACAAAAGCCCCGAAG TTAT CTTCGGGGCTTTTGTGTATGGGGGAC TGCCTTATACCAATC TERM 1352 1434888 - 1434919 + T 100 -21.8 -2.87564 | opp_overlap 1434888 1434893, overlap 1434877 1434893 AGGTGTACCCATACA CAAAAGCCCCGAAG TTAT CTTCGGGGCTTTTG TGTATGGGGGACTGC TERM 1353 1434919 - 1434888 - T 100 -21.8 -2.91383 | opp_overlap 1434888 1434877 1434893, overlap 1434893 AGGTGTACCCATACA CAAAAGCCCCGAAG TTAT CTTCGGGGCTTTTG TGTATGGGGGACTGC TERM 1354 1434914 - 1434893 - T 100 -15.9 -4.61868 | opp_overlap 1434888 1434877 1434893, overlap 1434888 TACCCATACACAAAA GCCCCGAAG TTAT CTTCGGGGC TTTTGTGTATGGGGG TERM 1355 1434893 - 1434914 + T 100 -15.9 -4.60797 | opp_overlap 1434893 1434888, overlap 1434888 1434877 TACCCATACACAAAA GCCCCGAAG TTAT CTTCGGGGC TTTTGTGTATGGGGG Swoo_1116 1436429 - 1435203 - | sodium:dicarboxylate symporter TERM 1356 1435713 - 1435695 - G 74 -3.9 -4.9792 | gap 1 GACGTCAGATAAAAA CTTCACCA CTAG TGG-GAAG AAGATAAAGGCGTAG TERM 1357 1436311 - 1436301 - G 70 -5.4 -4.30177 | GATCAGATTAATAAA TAGG TCG CCTA AGGGGCCAAATATGG TERM 1358 1436636 - 1436611 - R 100 -9.1 -5.21236 | opp_overlap 1436609 AAGCCATAATAAAAA GGCCGATAT GCTTGTTG ATATCGGCC AATCGTTAATTGTGC Swoo_1117 1437808 - 1436741 - | beta-lactamase domain-containing protein TERM 1359 1437003 - 1436987 - G 72 -8 -3.86524 | ATAGTGCTGCATAAA GTCGAG ATCGG CTCGAC TGCCTATATTGCCAT TERM 1360 1437431 - 1437452 + g 85 -10.9 -3.79419 | opp_overlap 1437429, overlap 1437429 GGAGTAGACCAAGGT GGTGACAGG TTTA TCTGTCACC TGTTTTATGGCCGAA TERM 1361 1437919 - 1437934 + G 73 -4.6 -4.81752 | overlap 1437921 TTTGGCATTGGATGG CCGCCT ATTA AGGCTG TTTTTAACTGTTTTT Swoo_1118 1437887 - 1438804 + | LysR family transcriptional regulator Swoo_1119 1439704 - 1438796 - | ribokinase Swoo_1120 1440658 - 1439720 - | purine nucleosidase TERM 1362 1440982 - 1441003 + H 73 -9.5 -2.90901 | overlap 1440986 ATCGAAGCGCTTTGG CGAAGGAGT GTTG ACTCCTTTG TATGATTGCGCCTCT TERM 1363 1440986 - 1440999 + H 71 -6.7 -4.1347 | overlap 1440982 AAGCGCTTTGGCGAA GGAGT GTTG ACTCC TTTGTATGATTGCGC Swoo_1121 1441062 - 1442057 + | adenosine deaminase TERM 1364 1442200 - 1442182 - T 95 -13.1 -3.19442 | opp_overlap 1442182 ATTGAATAGACGTAA GGCGGCC GCAAA GGCCGCC TTTTTTATGTGCATT TERM 1365 1442182 - 1442200 + T 100 -13.1 -5.38951 | opp_overlap 1442182 ATTGAATAGACGTAA GGCGGCC GCAAA GGCCGCC TTTTTTATGTGCATT TERM 1366 1442250 - 1442233 - T 100 -11.3 -5.42265 | TCAAAGGATAAAAAA GCCGGTT GTGA AACCGGC GATAAACTAAGGGAG Swoo_1122 1442879 - 1442277 - | nitroreductase TERM 1367 1443598 - 1443624 + G 74 -6.6 -4.30576 | opp_overlap 1443592, overlap 1443593 1443600 TCCGACAGACTTGAG CAGGCATAACTG CAT CAATTATGCCTA TTTTAGTGGTGGCAG TERM 1368 1443600 - 1443622 + G 77 -9.2 -3.7574 | opp_overlap 1443592, overlap 1443593 1443598 CGACAGACTTGAGCA GGCATAACTG CAT CAATTATGCC TATTTTAGTGGTGGC Swoo_1123 1443044 - 1443955 + | LysR family transcriptional regulator TERM 1369 1444658 - 1444671 + G 74 -6.7 -4.32579 | opp_overlap 1444658 1444656 ATAACTCTCACAACA GCTTG AATT CAAGC TTTCTTGTCGACTCT Swoo_1124 1444195 - 1445079 + | hypothetical protein TERM 1370 1445105 - 1445131 + F 71 -8.1 -3.40022 | TTGGATTAGCCACTA GGTAGAAGTAA ATCAA TGACTTCTACC TTACTCTGTTACTTA Swoo_1125 1445328 - 1446665 + | hypothetical protein TERM 1371 1446715 - 1446697 - f 95 -13.1 -3.10112 | opp_overlap 1446697 ATTTAATCGATGTAA GGCGGCC TATAT GGCCGCC TTTTTGTGTGAGAAG TERM 1372 1446697 - 1446715 + F 100 -13.1 -4.96848 | opp_overlap 1446697 ATTTAATCGATGTAA GGCGGCC TATAT GGCCGCC TTTTTGTGTGAGAAG Swoo_1126 1447133 - 1448140 + | peptidase S15 TERM 1373 1448149 - 1448184 + T 73 -9.7 -2.54098 | gap 1, opp_overlap 1448167, overlap 1448148 TCTATAATTCGCCCA CTCGGCCCGCCCAAGG CATCC CCTTGGGCGT-CCAAG ATCTTCATTCCAAGA Swoo_1127 1449973 - 1448666 - | FAD dependent oxidoreductase TERM 1374 1448807 - 1448770 - G 71 -4.8 -4.57569 | overlap 1448772 1448773 GCACCTTGTCAAAAA TATCGAAGCGCTCAGC TTGTGC GGTAAGCGCCTCGGCA ATTAATTTCGCTGCC Swoo_1128 1450255 - 1450803 + | XRE family transcriptional regulator TERM 1375 1450843 - 1450854 + F 93 -7.2 -5.64274 | opp_overlap 1450843 TTAATCGTATTAAAA GGGC CTAG GCCC TTTTTTTGTGCCTGA TERM 1376 1450854 - 1450843 - f 76 -7.2 -4.28361 | opp_overlap 1450843 TTAATCGTATTAAAA GGGC CTAG GCCC TTTTTTTGTGCCTGA Swoo_1129 1451421 - 1452182 + | peptidase C26 Swoo_1130 1452184 - 1453533 + | glutamate--putrescine ligase TERM 1377 1453785 - 1453773 - f 79 -6.9 -4.63179 | AAATAAGAACTAAAA CCGGC TTG ACCGG TAAACAATGACAGAC Swoo_1131 1453842 - 1454942 + | extracellular solute-binding protein TERM 1378 1454975 - 1454953 - f 100 -17.8 -3.77177 | opp_overlap 1454945 ACTAATAGACCTAAA TTGGGCCAGC GCT GCTGGCCCAA GTTCCACCTCTCGTT TERM 1379 1455004 - 1455025 + F 79 -9.4 -3.72893 | opp_overlap 1454998 TTAAAAATTGCCGAA GGTGCCAC TGATAT GTGGCGCC TTTAGTGGAGAAGTA TERM 1380 1455606 - 1455595 - g 80 -4.4 -5.24129 | GCTCTGGATAAAAAA CTGA GAAC TCAG ATGCAGCTTGAGGTC Swoo_1132 1455043 - 1456179 + | spermidine/putrescine ABC transporter ATPase subunit TERM 1381 1456240 - 1456252 + G 72 -7.7 -3.94811 | GGCAATGCTGGACCA TAGGG GTT CCCTA TTTCTGGCTACTGTT Swoo_1133 1456191 - 1457096 + | binding-protein-dependent transport systems inner membrane component Swoo_1134 1457093 - 1457920 + | ornithine carbamoyltransferase TERM 1382 1458000 - 1457959 - f 91 -9.7 -4.72986 | gap 1, overlap 1457962 1457963 TATGGTGAGTAAAAA TAAGCGTCATAACAAGATGT ATA ACCCCTTGTTATGACG-TCA GACTGAACAATTAAC TERM 1383 1457998 - 1457962 - f 100 -11.7 -4.47707 | overlap 1457959 1457963 GGTGAGTAAAAATAA GCGTCATAACAAGATGT ATA ACCCCTTGTTATGACGT CAGACTGAACAATTA TERM 1384 1457997 - 1457963 - f 100 -15.2 -3.27901 | overlap 1457962 1457959 GTGAGTAAAAATAAG CGTCATAACAAGATGT ATA ACCCCTTGTTATGACG TCAGACTGAACAATT TERM 1385 1458099 - 1458084 - g 72 -7.6 -4.05446 | overlap 1458089 TCGGCTAATGACAAA GTAGAG CGGG CTCTAC TCGCCGACAATATTG TERM 1386 1458231 - 1458252 + G 71 -10.1 -2.72855 | ATTGGTTGGGGAGCA TCTGGCCGC AATG GCGGACAGA TAGTTAACAGCTTTA Swoo_1135 1458030 - 1459316 + | FAD dependent oxidoreductase Swoo_1136 1459552 - 1461348 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1387 1461616 - 1461631 + G 80 -4.6 -5.24989 | AGGAGGATATTCAAT CTGTCC AGCC GGGCGG TTTTTTGCTCTATGA TERM 1388 1461991 - 1462011 + G 70 -7.5 -3.96624 | opp_overlap 1461991 TAGTTGATGGCAATA CCGCTTCTG GTT TAGGGGCGG TTTATGGTGGCGCTA Swoo_1137 1461345 - 1463174 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Swoo_1138 1463184 - 1464236 + | thiamine pyrophosphate binding domain-containing protein Swoo_1139 1464962 - 1464249 - | hypothetical protein Swoo_1140 1466473 - 1464971 - | tryptophan halogenase TERM 1389 1465084 - 1465071 - G 76 -3.8 -5.09225 | ATCTGATGTAAAAAA GAGG TTAGCT CCTC ATCTTCCATCGAATC Swoo_1141 1467511 - 1466495 - | transcription factor jumonji domain-containing protein Swoo_1142 1468247 - 1467525 - | SapC family protein TERM 1390 1468268 - 1468282 + r 79 -5 -5.34365 | AGGTCCTAATGGTTG TTCGAT CGA GTCGAA TTTTTATTGTTATAA Swoo_1143 1469878 - 1468292 - | tryptophan halogenase TERM 1391 1468600 - 1468616 + g 81 -9.4 -3.94634 | TTGTTTGTTGATGAT CACGCC AGTAG GGCGTG TTGTTTCGACTGCTA TERM 1392 1469227 - 1469241 + g 70 -5.6 -4.3467 | overlap 1469229 TAACAGAACCTGACT GAGTGC ACT GCACAC TTTTAATGTCACCAT Swoo_1144 1473090 - 1470094 - | TonB-dependent receptor TERM 1393 1472520 - 1472540 + g 71 -10.5 -2.71712 | overlap 1472519 TGACAGAGCCTTTAT CTGTTGATG AGT CATCAACGG CTTTAGCCCCAAAAG TERM 1394 1473344 - 1473371 + r 82 -9.2 -4.03989 | gap 1, opp_overlap 1473349 GTTATCTTATGTTTA TGAG-ATGGCAGC CAA GCTGCCACACTCA TTTCAATTTTTATCT TERM 1395 1473365 - 1473349 - R 86 -12.3 -2.79183 | opp_overlap 1473344 CTTATGTTTATGAGA TGGCAGC CAA GCTGCCA CACTCATTTCAATTT Swoo_1145 1474397 - 1473396 - | LacI family transcription regulator Swoo_1146 1475776 - 1474448 - | sugar (glycoside-Pentoside-hexuronide) transporter Swoo_1147 1477161 - 1475821 - | beta-galactosidase TERM 1396 1478222 - 1478232 + G 71 -2.4 -5.07275 | overlap 1478221 1478229 TCATTTAGTTCTTGG CGCC GTG GGCA TTTTTGTCTATGTGG Swoo_1148 1477470 - 1478756 + | glucose/galactose transporter TERM 1397 1478895 - 1478883 - g 71 -7.7 -3.72695 | AGTGGTTGCAGTAAA GAGGT AGC ACCTC AAAAGGAAGATCTAG Swoo_1149 1478805 - 1481393 + | glycoside hydrolase family 3 protein Swoo_1150 1481436 - 1482338 + | ROK family protein TERM 1398 1482363 - 1482394 + F 100 -13.2 -4.1711 | opp_overlap 1482365 1482371, overlap 1482365 1482371 GATGACTCACATCAA AACAAAAACCTGCA ATGA TGCAGGTTTTTGTA TTTATTAGGGGTAAT TERM 1399 1482365 - 1482392 + F 100 -15.8 -3.68324 | opp_overlap 1482365 1482371, overlap 1482363 1482371 TGACTCACATCAAAA CAAAAACCTGCA ATGA TGCAGGTTTTTG TATTTATTAGGGGTA TERM 1400 1482392 - 1482365 - f 100 -15.8 -4.3586 | opp_overlap 1482365 1482363 1482371, overlap 1482371 TGACTCACATCAAAA CAAAAACCTGCA ATGA TGCAGGTTTTTG TATTTATTAGGGGTA TERM 1401 1482386 - 1482371 - f 100 -9 -5.52079 | opp_overlap 1482365 1482363 1482371, overlap 1482365 ACATCAAAACAAAAA CCTGCA ATGA TGCAGG TTTTTGTATTTATTA TERM 1402 1482371 - 1482386 + F 100 -9 -5.28414 | opp_overlap 1482371 1482365, overlap 1482365 1482363 ACATCAAAACAAAAA CCTGCA ATGA TGCAGG TTTTTGTATTTATTA TERM 1403 1482545 - 1482561 + F 78 -10.9 -2.62371 | opp_overlap 1482545, overlap 1482544 AAAATATGAGTCAAA GCAGCTA TTT TAGCTGC CTTAGTTAACTAACT TERM 1404 1482561 - 1482545 - f 84 -10.9 -3.73281 | opp_overlap 1482545 1482544 AAAATATGAGTCAAA GCAGCTA TTT TAGCTGC CTTAGTTAACTAACT TERM 1405 1482711 - 1482733 + G 71 -8.4 -3.53563 | CACATTCAATACCCA TTGCCGATGG CAG CCAATGGCAA TTTCAAAGCCGATAT Swoo_1151 1482599 - 1484299 + | hypothetical protein Swoo_1152 1484397 - 1484768 + | hypothetical protein TERM 1406 1485613 - 1485597 - T 77 -9.5 -3.50335 | overlap 1485593 GGTGATAAACAGCAA TGAAGGT TCA ACCTTCA ATAATCAGATCCAAC TERM 1407 1485820 - 1485850 + T 100 -15.7 -4.30014 | opp_overlap 1485820 1485827, overlap 1485827 TAAATGTTCCAGACA CAAAAAAGCCTAC ACAAG GTAGGCTTTTTTG TTTTAAATTGGTGGC TERM 1408 1485850 - 1485820 - T 100 -15.7 -2.89055 | opp_overlap 1485820 1485827, overlap 1485827 TAAATGTTCCAGACA CAAAAAAGCCTAC ACAAG GTAGGCTTTTTTG TTTTAAATTGGTGGC TERM 1409 1485827 - 1485843 + T 100 -8 -5.80951 | opp_overlap 1485827 1485820, overlap 1485820 TCCAGACACAAAAAA GCCTAC ACAAG GTAGGC TTTTTTGTTTTAAAT TERM 1410 1485843 - 1485827 - T 100 -8 -5.4251 | opp_overlap 1485820 1485827, overlap 1485820 TCCAGACACAAAAAA GCCTAC ACAAG GTAGGC TTTTTTGTTTTAAAT TERM 1411 1486107 - 1486135 + T 76 -10.4 -2.80187 | opp_overlap 1486113, overlap 1486113 AGAGGCTTAAATATA AAAAAACCTGCC GAGTG GGCAGGTTTTTA CTGTTTATCTATCTG TERM 1412 1486113 - 1486129 + T 91 -9.4 -4.96106 | opp_overlap 1486113, overlap 1486107 TTAAATATAAAAAAA CCTGCC GAGTG GGCAGG TTTTTACTGTTTATC TERM 1413 1486129 - 1486113 - T 100 -9.4 -5.88197 | opp_overlap 1486113 1486107 TTAAATATAAAAAAA CCTGCC GAGTG GGCAGG TTTTTACTGTTTATC Swoo_1153 1487996 - 1486161 - | RNA polymerase, sigma 70 subunit, RpoD TERM 1414 1487072 - 1487100 + g 86 -7.5 -5.07486 | overlap 1487073 ACCATGCGATGCTGC TTTCGTCAGAGGT ATA ACCTTTAACGAAG TTTTTCTTCGGCATC TERM 1415 1487073 - 1487099 + g 72 -8.8 -3.63768 | overlap 1487072 CCATGCGATGCTGCT TTCGTCAGAGGT ATA ACCTTTAACGAA GTTTTTCTTCGGCAT Swoo_1154 1489849 - 1488122 - | DNA primase TERM 1416 1488568 - 1488582 + g 71 -4.2 -4.74706 | opp_overlap 1488569, overlap 1488569 CTTGCTCTTTACTAG AGAAGC CCA GCTTCC TTTTTAGCTCTTCAG TERM 1417 1489217 - 1489206 - G 70 -5.8 -4.30844 | opp_overlap 1489205 ACTCGACCACCAAAA CCGA TAAC TCGG CCTCTTCTGTCACGA TERM 1418 1489926 - 1489903 - R 91 -11 -4.72277 | opp_overlap 1489906 AACAATATAAACAAA CAAGCCGCGC AAGA GCACGGCTTA TTCACGCATTAAACA TERM 1419 1489906 - 1489923 + r 73 -8.3 -3.63569 | opp_overlap 1489903 AATATAAACAAACAA GCCGCGC AAGA GCACGGC TTATTCACGCATTAA Swoo_1155 1490389 - 1489946 - | GatB/YqeY domain-containing protein Swoo_1156 1490611 - 1490396 - | ribosomal protein S21 Swoo_1157 1491001 - 1492014 + | glycoprotease family metalloendopeptidase TERM 1420 1492096 - 1492038 - T 100 -17.1 -3.6217 | gap 1, opp_overlap 1492055, overlap 1492055 1492095 AGCTACGAGATATAA TCTGTAAGCAATAAAAACACCCCGTCTT TTAT AAGGCGGGGTGTTTTTAT-GTATACAGA ACCTAGAACCTAGAA TERM 1421 1492080 - 1492055 - T 100 -13.3 -5.1963 | opp_overlap 1492055, overlap 1492038 TGTAAGCAATAAAAA CACCCCGTCTT TTAT AAGGCGGGGTG TTTTTATGTATACAG TERM 1422 1492055 - 1492080 + T 100 -15.5 -5.03994 | opp_overlap 1492055 1492038 TGTAAGCAATAAAAA CACCCCGTCTT TTAT AAGGCGGGGTG TTTTTATGTATACAG TERM 1423 1492152 - 1492098 - T 74 -8.6 -3.60525 | opp_overlap 1492131 1492132 1492133 1492140, overlap 1492095 1492105 TTTATGTATACAGAA CCTAGAACCTAGAACCTAGAACCTAG AAC CTAGAACCTAGAACCTAGAACCTAGG TCTTAGGGGTTTTCT TERM 1424 1492159 - 1492105 - T 83 -10.8 -3.46913 | opp_overlap 1492131 1492132 1492133 1492140, overlap 1492095 1492098 ATACAGAACCTAGAA CCTAGAACCTAGAACCTAGAACCTAG AAC CTAGAACCTAGAACCTAGGTCTTAGG GGTTTTCTTTCTTGA TERM 1425 1492131 - 1492161 + T 71 -3.2 -5.09762 | opp_overlap 1492095 1492098 1492105, overlap 1492132 1492133 1492140 GAACCTAGAACCTAG AACCTAGAACCTAG AAC CTAGGTCTTAGGGG TTTTCTTTCTTGAAA TERM 1426 1492133 - 1492159 + T 74 -10.2 -2.77779 | opp_overlap 1492095 1492098 1492105, overlap 1492132 1492131 1492140 ACCTAGAACCTAGAA CCTAGAACCTAG AAC CTAGGTCTTAGG GGTTTTCTTTCTTGA Swoo_1158 1492756 - 1492148 - | hypothetical protein TERM 1427 1493303 - 1493291 - g 71 -7.7 -3.72576 | opp_overlap 1493280 1493290 CGCTCTGTTATGAAA CGGTT TCT AACCG CTTAACTGCTTTGAT Swoo_1159 1493128 - 1493481 + | dihydroneopterin aldolase Swoo_1160 1493481 - 1493987 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1428 1494800 - 1494824 + G 73 -6.3 -4.43283 | overlap 1494801 TGTTATCTACCGTTT GGCGCTTGGGG CGC TCCTATGTGCC TTTATATTTATGTAA Swoo_1161 1494039 - 1494839 + | undecaprenol kinase Swoo_1162 1494867 - 1495745 + | rRNA (guanine-N(1)-)-methyltransferase Swoo_1163 1495827 - 1496732 + | ErfK/YbiS/YcfS/YnhG family protein TERM 1429 1496780 - 1496765 - f 78 -10.4 -3.17688 | opp_overlap 1496765 TAACGATTTCATTAA GCGCTC TAAG GAGCGC TTTTTTGTGTCTCGA TERM 1430 1496765 - 1496780 + F 100 -10.4 -5.4251 | opp_overlap 1496765 TAACGATTTCATTAA GCGCTC TAAG GAGCGC TTTTTTGTGTCTCGA Swoo_1164 1496871 - 1497398 + | hypothetical protein TERM 1431 1497487 - 1497537 + T 74 -9.8 -2.87146 | opp_overlap 1497493 1497496 1497529 1497535, overlap 1497486 1497490 1497491 GGCGGAGCGGAGTTT TAAAAAGGATGTATCGGCAACACA AGA TGTGTTGCCGATACAGACAAATTA CTTCTTGTAAGAAGA TERM 1432 1497491 - 1497533 + T 76 -10.6 -2.74443 | opp_overlap 1497493 1497496 1497529, overlap 1497490 1497487 1497486 GAGCGGAGTTTTAAA AAGGATGTATCGGCAACACA AGA TGTGTTGCCGATACAGACAA ATTACTTCTTGTAAG TERM 1433 1497531 - 1497493 - T 100 -17.6 -4.59773 | opp_overlap 1497491 1497490 1497487 1497486, overlap 1497496 1497529 GCGGAGTTTTAAAAA GGATGTATCGGCAACACA AGA TGTGTTGCCGATACAGAC AAATTACTTCTTGTA TERM 1434 1497528 - 1497496 - T 100 -22.3 -3.24422 | opp_overlap 1497491 1497490 1497487 1497486, overlap 1497493 GAGTTTTAAAAAGGA TGTATCGGCAACACA AGA TGTGTTGCCGATACA GACAAATTACTTCTT Swoo_1165 1497801 - 1497535 - | major outer membrane lipoprotein, putative Swoo_1166 1499261 - 1498020 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 1435 1499318 - 1499331 + H 72 -2.3 -5.19261 | overlap 1499319 ACCATGCCTTGAATC GGCGT ACAG ACGCA TTTTTTCATCCATTT TERM 1436 1499965 - 1499946 - g 79 -11.4 -3.12668 | overlap 1499938 CCTTAAACGCCAAGA GCTACGCC AGTT GGCGCAGC GGATCACCGCAAGAT Swoo_1167 1499422 - 1501038 + | peptidoglycan binding domain-containing protein Swoo_1168 1501038 - 1502024 + | general secretion pathway protein B TERM 1437 1502087 - 1502041 - T 80 -11.8 -2.53263 | gap 1, opp_overlap 1502046, overlap 1502046 GTTATGGTTAACTGA TAAAAGCCTGTGAATGC-GCC ATTAAA GGCAGTATTCACAGGCTTTTT TGTCTCTATCAATTA TERM 1438 1502046 - 1502082 + T 100 -13.9 -5.4492 | gap 1, opp_overlap 1502041 1502046 GGTTAACTGATAAAA GCCTGTGAATGC-GCC ATTAAA GGCAGTATTCACAGGC TTTTTTGTCTCTATC TERM 1439 1502082 - 1502046 - T 100 -11.7 -4.4715 | gap 1, opp_overlap 1502046, overlap 1502041 GGTTAACTGATAAAA GCCTGTGAATGC-GCC ATTAAA GGCAGTATTCACAGGC TTTTTTGTCTCTATC Swoo_1169 1503356 - 1502109 - | citrate transporter TERM 1440 1502197 - 1502210 + g 72 -6.7 -4.26461 | opp_overlap 1502196, overlap 1502194 ACATATTTAAGGTAG CTGAC AAAG GTCAG TTCTTTTACCTTGCT TERM 1441 1504005 - 1504017 + G 71 -4.8 -4.45765 | overlap 1504010 TGTTTGGTTAGTCAT CTGC GCAAA GCAG TTTGTTGGTTTTGGG Swoo_1170 1503949 - 1504152 + | hypothetical protein TERM 1442 1504154 - 1504203 + T 78 -11 -2.50816 | gap 1, opp_overlap 1504141 1504159 1504161 1504171, overlap 1504141 1504171 GACGGCCTTTTTAAT ATTAAGAGCATAAAAAAGGACGC TTGAT GCGTCCTTTTTTGTGC-CTGAAA CTTAATGGCTAACAA TERM 1443 1504198 - 1504159 - T 100 -13.1 -3.36273 | gap 1, opp_overlap 1504141 1504154 1504171, overlap 1504141 1504161 1504171 CCTTTTTAATATTAA GAGCATAAAAAAGGACGC TTGAT GCGTCCTTTTTTGTGC-C TGAAACTTAATGGCT TERM 1444 1504197 - 1504161 - T 100 -16.8 -3.25073 | opp_overlap 1504141 1504154 1504171, overlap 1504141 1504159 1504171 TTTTTAATATTAAGA GCATAAAAAAGGACGC TTGAT GCGTCCTTTTTTGTGC CTGAAACTTAATGGC TERM 1445 1504187 - 1504171 - T 100 -9.4 -5.36965 | opp_overlap 1504141 1504154 1504171, overlap 1504141 1504161 1504159 TAAGAGCATAAAAAA GGACGC TTGAT GCGTCC TTTTTTGTGCCTGAA TERM 1446 1504171 - 1504187 + T 100 -9.4 -5.28176 | opp_overlap 1504141 1504171 1504161 1504159, overlap 1504141 1504154 TAAGAGCATAAAAAA GGACGC TTGAT GCGTCC TTTTTTGTGCCTGAA Swoo_1171 1505518 - 1504232 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 1447 1505436 - 1505417 - G 80 -8.6 -4.2461 | gap 1 AGCTTTATCAATAAA GCG-AGGTG AAC CACCTACGC CATTAAAAGCACGTA Swoo_1172 1506567 - 1505548 - | aspartate carbamoyltransferase TERM 1448 1506773 - 1506791 + r 100 -14.6 -4.67011 | opp_overlap 1506773 TGGTCAATAAAAAAA TCCGGCAG TAT CTGCCGGA TTTTTAAGTGGGCTT TERM 1449 1506791 - 1506773 - R 100 -14.6 -5.7946 | opp_overlap 1506773 TGGTCAATAAAAAAA TCCGGCAG TAT CTGCCGGA TTTTTAAGTGGGCTT Swoo_1173 1507220 - 1506810 - | cytochrome c class I Swoo_1174 1507600 - 1507220 - | hypothetical protein Swoo_1175 1508826 - 1507600 - | oxidoreductase molybdopterin binding Swoo_1176 1509161 - 1508829 - | cytochrome c class I Swoo_1177 1509541 - 1509756 + | hypothetical protein Swoo_1178 1509960 - 1511417 + | aspartate ammonia-lyase TERM 1450 1511461 - 1511443 - T 93 -11.7 -4.36127 | opp_overlap 1511443 GTTAATAACTGAAAA CCGGAGC TAGAT GCTCCGG TTTTTTATTAGACTT TERM 1451 1511443 - 1511461 + T 100 -11.7 -5.4756 | opp_overlap 1511443 GTTAATAACTGAAAA CCGGAGC TAGAT GCTCCGG TTTTTTATTAGACTT Swoo_1179 1512170 - 1511469 - | SNARE associated Golgi protein TERM 1452 1511937 - 1511910 - G 82 -10 -3.86897 | gap 1, overlap 1511920 GCGACCCTGTAGAAA TGCAACC-CAACT GCC AGTTGCGGCTGCA ACCAGTAAAATGGTA TERM 1453 1512835 - 1512864 + G 83 -2.7 -5.59962 | opp_overlap 1512839, overlap 1512839 TTAGAGGGAGAGGGG GAAACGGCTCCTA AAGC TAGGGGCAGTAGC TTTTTCTTTGTTTTA Swoo_1180 1512496 - 1513221 + | integral membrane protein TerC Swoo_1181 1513461 - 1513799 + | nitrogen regulatory protein P-II Swoo_1182 1513800 - 1515098 + | ammonium transporter TERM 1454 1515119 - 1515149 + T 90 -12 -3.61178 | AGCTGTTCACTTTAG TGTTGCTCTGGATA AAT TTTTCAGAGCAACA TTTAGAATACCTGAG Swoo_1183 1516699 - 1515173 - | hypothetical protein TERM 1455 1516457 - 1516441 - G 71 -9.5 -3.12717 | overlap 1516437 ATTCATTAACAGATA TTTTCCC AAC GGGAAAA ACCATATCTCGGTAA Swoo_1184 1516995 - 1517459 + | alkylhydroperoxidase Swoo_1185 1517971 - 1517483 - | hypothetical protein TERM 1456 1517670 - 1517696 + g 83 -2.8 -5.52909 | opp_overlap 1517671, overlap 1517671 AAGGATTCAGCAACA AGCTTGCGGGTA TAG TTCCCACAGGCA TTTTTTTGAGTATTG Swoo_1186 1519542 - 1518004 - | amidohydrolase Swoo_1187 1520242 - 1519574 - | hypothetical protein Swoo_1188 1520600 - 1521307 + | hypothetical protein Swoo_1189 1521449 - 1521865 + | glyoxalase/bleomycin resistance protein/dioxygenase Swoo_1190 1521993 - 1522808 + | AraC family transcriptional regulator Swoo_1191 1523029 - 1523397 + | hypothetical protein TERM 1457 1524476 - 1524486 + G 70 -5.4 -4.30978 | opp_overlap 1524476 1524470, overlap 1524470 CAAGAGCAACAAAAA TCTG AAA CAGA TTTTAGTAAATTAAA TERM 1458 1524486 - 1524476 - g 83 -5.4 -5.19251 | opp_overlap 1524470 1524476, overlap 1524470 CAAGAGCAACAAAAA TCTG AAA CAGA TTTTAGTAAATTAAA Swoo_1192 1523768 - 1524547 + | hypothetical protein TERM 1459 1524682 - 1524672 - T 75 -8.2 -3.84246 | overlap 1524673 GTTTCAAGGATGAAA CCGC AGA GCGG CCAAGGATGGCTTCA Swoo_1193 1525316 - 1524843 - | MarR family transcriptional regulator TERM 1460 1525406 - 1525370 - R 100 -12.5 -5.12068 | opp_overlap 1525370 TAGAGCGAATAAAAA TGCGGTATAACGC ATGATGCCTGA GCGTTATACCGCA TTTTTTAGTGGTTGA TERM 1461 1525370 - 1525406 + r 100 -12.5 -5.2189 | opp_overlap 1525370 TAGAGCGAATAAAAA TGCGGTATAACGC ATGATGCCTGA GCGTTATACCGCA TTTTTTAGTGGTTGA Swoo_1194 1526137 - 1525433 - | hypothetical protein Swoo_1195 1527369 - 1526152 - | putative transporter, BCCT family protein TERM 1462 1527467 - 1527514 + r 100 -12.2 -4.53705 | opp_overlap 1527467, overlap 1527456 1527471 TTTTGGCTGCAGGAA TCCCTCAAGCCTTAATTATCGT TTTC ACGAAAGTTAAGGCTTGATAGA TTTTATCTGGCGATT TERM 1463 1527514 - 1527467 - R 87 -12.2 -3.14132 | opp_overlap 1527456 1527467 1527471 TTTTGGCTGCAGGAA TCCCTCAAGCCTTAATTATCGT TTTC ACGAAAGTTAAGGCTTGATAGA TTTTATCTGGCGATT TERM 1464 1527471 - 1527510 + r 100 -16 -2.82775 | opp_overlap 1527467, overlap 1527456 1527467 GGCTGCAGGAATCCC TCAAGCCTTAATTATCGT TTTC ACGAAAGTTAAGGCTTGA TAGATTTTATCTGGC TERM 1465 1527565 - 1527622 + r 79 -9.4 -3.72742 | gap 1, overlap 1527567 CTTAGGCTGGCCTTA TGCCTGTACTGGTGAATT-TGCCAATT AGGAC AATTGGCAAAATTCCCCAGTTAAGGTG TTATCTTGCTGCTGA TERM 1466 1527567 - 1527620 + r 90 -12 -3.44124 | gap 1, overlap 1527565 TAGGCTGGCCTTATG CCTGTACTGGTGAATT-TGCCAATT AGGAC AATTGGCAAAATTCCCCAGTTAAGG TGTTATCTTGCTGCT Swoo_1196 1529320 - 1527623 - | choline dehydrogenase Swoo_1197 1530793 - 1529330 - | aldehyde dehydrogenase Swoo_1198 1531389 - 1530784 - | TetR family transcriptional regulator TERM 1467 1530948 - 1530963 + g 74 -4 -5.00616 | CTGCTGTGATGGCCT CTGCTT GTGG AAGTAG TTTTTTAAAAGAGAA TERM 1468 1531496 - 1531476 - H 76 -9.1 -3.81414 | overlap 1531479 ACGTTCAATTAATAA CAACTCTAA TGG TTAGAGCTG TAACTATCAAGCTTT TERM 1469 1531493 - 1531479 - H 72 -7.2 -4.0342 | overlap 1531476 TTCAATTAATAACAA CTCTAA TGG TTAGAG CTGTAACTATCAAGC Swoo_1199 1531788 - 1532201 + | hypothetical protein TERM 1470 1532608 - 1532624 + G 100 -3.6 -5.80727 | opp_overlap 1532608 ATTTTATTCATTCAA GCCGAT CAGGT AACGGC TTTTTTCTTGTTTTT Swoo_1200 1532427 - 1532867 + | hypothetical protein Swoo_1201 1534723 - 1532996 - | chloride channel core Swoo_1202 1534803 - 1535708 + | hypothetical protein Swoo_1203 1535801 - 1536169 + | iron-sulfur cluster assembly accessory protein TERM 1471 1536198 - 1536214 + T 90 -6.5 -5.67063 | opp_overlap 1536198 AATAGAGATTAAAAA GCCAGGT TAA AGCTGGC TTTTTTTATGCTCAG TERM 1472 1536214 - 1536198 - T 81 -6.5 -4.87037 | opp_overlap 1536198 AATAGAGATTAAAAA GCCAGGT TAA AGCTGGC TTTTTTTATGCTCAG Swoo_1204 1536846 - 1536337 - | hypothetical protein TERM 1473 1536399 - 1536377 - G 70 -6.3 -4.18506 | overlap 1536398 TTACTGTTAAAATAA GCTTTTACC TTAGG GGTAAAGGC TATCCATACTTGAAG TERM 1474 1536667 - 1536642 - G 83 -12.7 -3.10464 | overlap 1536634 1536649 TCATCAAGGTTAAGA CGCAAAACAGA ACCC CCTGTTTTGCG ACTATGCCGCTAATG TERM 1475 1536709 - 1536719 + g 72 -6.8 -4.26079 | opp_overlap 1536708, overlap 1536709 GAAGAAGAAGCACAG GGCT AAA AGCC TTTTAGGTAGTTTAG Swoo_1205 1537243 - 1536866 - | hypothetical protein TERM 1476 1537364 - 1537380 + r 79 -9.4 -3.8505 | opp_overlap 1537364 AAGAGAAATAAAAAA CGACGC CTTGC GCGTCG TTTAATGGTATTACT TERM 1477 1537380 - 1537364 - R 100 -9.4 -5.7827 | opp_overlap 1537364 AAGAGAAATAAAAAA CGACGC CTTGC GCGTCG TTTAATGGTATTACT Swoo_1206 1538103 - 1537405 - | MIP family channel protein TERM 1478 1537951 - 1537929 - G 76 -10.6 -3.03474 | overlap 1537931 GGTGACAACCAGAGA TATGGCCAAC AGC GTAGGCCATA GTGAGTACCGTTAGG Swoo_1207 1539669 - 1538275 - | alkaline phosphatase TERM 1479 1538998 - 1538988 - G 71 -4.6 -4.59773 | CTTTAGGGGCAAAAA GGCC TAA AGCC GGAAGTGACTCTATC Swoo_1208 1542325 - 1539776 - | peptidase S9 prolyl oligopeptidase TERM 1480 1540603 - 1540619 + g 70 -9.5 -2.96395 | GTACGCCATCCTCAC GCTTGTA CTT TACAAGC TGTCTGCTCATCCCT TERM 1481 1541643 - 1541656 + g 71 -2.3 -5.09225 | overlap 1541632 AGCAGATCTTGATAG GTCCT TCTG GGGGC TTTTTTACCTAAAGT TERM 1482 1544624 - 1544614 - g 74 -8.2 -4.05033 | opp_overlap 1544612 1544622 TTTATTTTAGAGAAA GCGG TAG CCGC TATCAGTTGATCAAC Swoo_1209 1542666 - 1544810 + | winged helix family two component response transcriptional regulator Swoo_1210 1545984 - 1544875 - | hypothetical protein Swoo_1211 1547480 - 1546053 - | peptidase M23B TERM 1483 1546117 - 1546131 + g 77 -3.5 -5.18866 | gap 1 ATCTGTTTACTGAGA GCCAGG AATG CC-GGC TTTTCTTTATTTGCG TERM 1484 1547978 - 1547968 - g 72 -6.8 -4.19817 | opp_overlap 1547968 TTGATCCAGCTAAAA CTCG TAT CGAG TTTAACTCAAGCTGG Swoo_1212 1547619 - 1548815 + | tyrosyl-tRNA synthetase TERM 1485 1548841 - 1548873 + T 93 -10.8 -5.0666 | gap 1, opp_overlap 1548849, overlap 1548842 1548849 TGATTCTATTTGATG C-TAAAAAAGCCAGC AGTT GCTGGCTTTTTTGTG TTTATTTTTTAGCTC TERM 1486 1548842 - 1548871 + T 100 -14.5 -4.13692 | opp_overlap 1548849, overlap 1548841 1548849 GATTCTATTTGATGC TAAAAAAGCCAGC AGTT GCTGGCTTTTTTG TGTTTATTTTTTAGC TERM 1487 1548849 - 1548864 + T 100 -10.4 -5.61913 | opp_overlap 1548849, overlap 1548842 1548841 TTTGATGCTAAAAAA GCCAGC AGTT GCTGGC TTTTTTGTGTTTATT TERM 1488 1548864 - 1548849 - T 93 -10.4 -5.0538 | opp_overlap 1548849 1548842 1548841 TTTGATGCTAAAAAA GCCAGC AGTT GCTGGC TTTTTTGTGTTTATT Swoo_1213 1549364 - 1548888 - | hypothetical protein Swoo_1214 1550002 - 1549367 - | hypothetical protein Swoo_1215 1550388 - 1549999 - | hypothetical protein TERM 1489 1550217 - 1550227 + g 77 -3.2 -5.18561 | opp_overlap 1550210, overlap 1550210 GAATAATACTGATCC TCTG GCG CAGG TTTTTTAGCTGTTTA Swoo_1216 1551461 - 1550475 - | cobalamin biosynthesis protein CbiB TERM 1490 1551045 - 1551064 + g 72 -7.2 -4.09685 | CTCCTGTGTATCTCG TGTTAGCC AAGG GGTTAACA TTTTGCGAGCTCGGG Swoo_1217 1552194 - 1551502 - | adenosylhomocysteine nucleosidase TERM 1491 1552057 - 1552069 + g 71 -7.7 -3.72315 | overlap 1552056 ACCTATGCCAGAGCG GGTGA CTA TCACC TCTTTTCCGTCTAAT Swoo_1218 1552969 - 1552418 - | hypothetical protein TERM 1492 1553121 - 1553101 - R 78 -9.8 -3.34522 | opp_overlap 1553097 1553094 ATAGGGGCTAATCAA CTCCATCT GCTTG AGATGGAG GGGACTATTTAGCTA Swoo_1219 1553519 - 1553145 - | hypothetical protein TERM 1493 1553642 - 1553659 + r 100 -11.3 -5.42862 | opp_overlap 1553642 TGTGGGCAGTAAAAA GCACACC TTCC GGTGTGC TTTTTTTGAACCTAT TERM 1494 1553659 - 1553642 - R 91 -11.3 -4.72272 | opp_overlap 1553642 TGTGGGCAGTAAAAA GCACACC TTCC GGTGTGC TTTTTTTGAACCTAT Swoo_1220 1555109 - 1553700 - | glutamate synthase, small subunit Swoo_1221 1559564 - 1555116 - | glutamate synthase (ferredoxin) TERM 1495 1557090 - 1557071 - G 71 -9.3 -3.33261 | CTTTAATGGCGATAA GATCGCG CAGTGT CGCGATC GGGCGGTTATCAACC TERM 1496 1557296 - 1557255 - G 71 -9.5 -3.05384 | gap 1, overlap 1557260 CTGGTGGGCACGGAA GGCAAGCTTATGC-AGCTCA ACC TGATCTTGCTCAAGCTCGCC AAAGTTAGCGCCTTC Swoo_1222 1560077 - 1561015 + | putative radical SAM protein Swoo_1223 1561180 - 1561545 + | Hpt protein TERM 1497 1561570 - 1561598 + F 100 -14 -5.27923 | TTTGCTATGCTGATG GCGCTAATGGAG CTTGA CTCTATTAGCGC TTTTTTATGGAATTA Swoo_1224 1561787 - 1562698 + | LysR family transcriptional regulator TERM 1498 1562717 - 1562735 + T 75 -6.7 -4.40132 | opp_overlap 1562717 AATGCAATGATAAAA GCCTGAG CGAGC TTCAGGC TTTGTTATGATTGCT TERM 1499 1562735 - 1562717 - T 74 -6 -4.56093 | opp_overlap 1562717 AATGCAATGATAAAA GCCTGA GCGAGCT TCAGGC TTTGTTATGATTGCT Swoo_1225 1563824 - 1562757 - | putative adenylate/guanylate cyclase TERM 1500 1564132 - 1564147 + r 78 -10.4 -3.1478 | overlap 1564130 GCATTAACGACATTC CCGCCA TCCA TGGCGG TCTTCATGAAATAGT Swoo_1226 1565130 - 1564435 - | DNA mismatch repair endonuclease mutH TERM 1501 1565683 - 1565654 - H 74 -8.8 -3.43104 | gap 1, opp_overlap 1565660, overlap 1565652 1565656 AATGAGTTAAGAACA GA-GATATCCACA GATTT TGTGGATATCCTC ACTGACTTAATGGAA TERM 1502 1565680 - 1565656 - H 84 -11.6 -3.27902 | opp_overlap 1565660, overlap 1565652 1565654 TGAGTTAAGAACAGA GATATCCACA GATTT TGTGGATATC CTCACTGACTTAATG Swoo_1227 1565822 - 1566343 + | NUDIX hydrolase TERM 1503 1566368 - 1566387 + F 79 -7.2 -4.56358 | gap 1, opp_overlap 1566363 GAACAAAACATAGGG GCTCCTATC ATA GA-AGGAGC TTTTATCTGAATATA Swoo_1228 1566442 - 1568676 + | phosphoenolpyruvate-protein phosphotransferase PtsP TERM 1504 1568850 - 1568860 + G 80 -5.4 -5.09204 | CTGCTTATTTTACTC CCAA GCA TTGG TTTTTCTTCAGATAT Swoo_1229 1568736 - 1569530 + | hypothetical protein Swoo_1230 1569622 - 1570473 + | thymidylate synthase TERM 1505 1570702 - 1570686 - f 70 -8 -3.65425 | opp_overlap 1570686 1570688 TCTATAGACTCGAAA CATCGG AAATA CCGATG TGTATGGCTAATGGA Swoo_1232 1571977 - 1572360 + | hypothetical protein TERM 1506 1572461 - 1572436 - g 80 -4.5 -5.24531 | opp_overlap 1572436, overlap 1572438 ATGGTCCATAAAAAA GGCTCGGTGGC GAAA GCTGCCGAGGC TTTATGCTTAGCCCC TERM 1507 1572436 - 1572461 + G 80 -8.9 -4.05446 | opp_overlap 1572436 1572438 ATGGTCCATAAAAAA GGCTCGGTGGC GAAA GCTGCCGAGGC TTTATGCTTAGCCCC Swoo_1233 1572382 - 1573290 + | LysR family transcriptional regulator Swoo_1234 1573366 - 1573617 + | hypothetical protein TERM 1508 1573639 - 1573661 + G 100 -11.3 -4.61633 | TCTCACCTCGTCATT CGACCAGCG TTTCT CGTTGGTCG TTTTTGCCAGTCTAT TERM 1509 1573958 - 1573988 + G 100 -12.7 -4.41494 | opp_overlap 1573965 TGGTCTGATATGTGT GACGACACAAGTT ACCGA AACTTGTGCCGTC TTTTGCTTGCCAGTA Swoo_1235 1573598 - 1574011 + | hypothetical protein Swoo_1236 1575649 - 1574039 - | L-aspartate oxidase Swoo_1237 1575850 - 1576428 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1510 1576423 - 1576404 - f 91 -8.6 -4.87665 | GGCGATCGATAAAAA GCTCCAAC CTTT GTTAGAGC AGTAATATCTTTTAC Swoo_1238 1576463 - 1577065 + | anti sigma-E protein, RseA Swoo_1239 1577115 - 1578047 + | sigma E regulatory protein, MucB/RseB TERM 1511 1578484 - 1578453 - g 81 -2.3 -5.47399 | gap 1 CTAAGGGTAAAAAAA TGGCCAAGCG-CAT GGAGG ATGACACCCAGCCA GTGATTATTTCTCAT Swoo_1240 1578062 - 1578517 + | positive regulator of sigma E, RseC/MucC TERM 1512 1578556 - 1578568 + F 72 -7.7 -3.77119 | TGTTCAAGCCATTCT GAGTC GAT GACTC TTATATTGATTGGTA TERM 1513 1579582 - 1579624 + G 71 -4.8 -4.56597 | overlap 1579584 TGATTATGAAAGTTT CCGTGATGCCTTGAACAAAC TAA GTTTGAATGATGCATCACTG TTTTTCGAGCCAGAG TERM 1514 1580356 - 1580342 - g 87 -8.6 -4.44667 | TCCCGTAAGAAGAAA CTGCTT AAT AAGCAG AAAGAGGGTAAGAAA Swoo_1241 1578653 - 1580443 + | GTP-binding protein LepA TERM 1515 1580506 - 1580480 - f 100 -16.6 -3.07947 | opp_overlap 1580480 1580482 1580484, overlap 1580484 TAATAATTGTTAATA GACAGCGCCGCA GTT TGCGGCGCTTTC GTTAGTGCAGTATAA TERM 1516 1580480 - 1580506 + F 100 -16.6 -2.50443 | opp_overlap 1580480 1580484, overlap 1580482 1580484 TAATAATTGTTAATA GACAGCGCCGCA GTT TGCGGCGCTTTC GTTAGTGCAGTATAA TERM 1517 1580502 - 1580484 - f 100 -16 -3.10017 | opp_overlap 1580482 1580480 1580484, overlap 1580480 AATTGTTAATAGACA GCGCCGCA GTT TGCGGCGC TTTCGTTAGTGCAGT TERM 1518 1580484 - 1580502 + F 100 -16 -3.95852 | opp_overlap 1580484 1580480, overlap 1580482 1580480 AATTGTTAATAGACA GCGCCGCA GTT TGCGGCGC TTTCGTTAGTGCAGT TERM 1519 1580724 - 1580707 - g 91 -11.3 -4.08692 | TAAGCGTCGTGAAAA GCTTGCG ATGG CGCAAGC AGCTGATGCCAATAT Swoo_1242 1580606 - 1581523 + | signal peptidase I TERM 1520 1581851 - 1581835 - g 80 -9.3 -4.13767 | opp_overlap 1581828, overlap 1581836 CTGGTGAGTTGAAAA GCGGCGG CTT CCGCCGT GAGTCAATTATTGCC TERM 1521 1581850 - 1581836 - g 83 -12.8 -3.08046 | opp_overlap 1581828, overlap 1581835 TGGTGAGTTGAAAAG CGGCGG CTT CCGCCG TGAGTCAATTATTGC TERM 1522 1582180 - 1582155 - g 79 -6.8 -4.63486 | gap 1, opp_overlap 1582155, overlap 1582156 AGTTCCCGAAGAAAA GCC-GAGCAGC TTGCC GCTGCACAGGC TTTGGAGTTAATAAA Swoo_1243 1581525 - 1582202 + | ribonuclease III Swoo_1244 1582199 - 1583188 + | GTP-binding protein Era TERM 1523 1583206 - 1583248 + F 100 -8.5 -5.94713 | TAATCTCATTAAAGG TGCCCCTTGGCTTAGTCAT CGAAT ATGACTGGGTTGATGGGCA TTTTTTTTGTCCAAT TERM 1524 1583446 - 1583456 + G 74 -5.4 -4.65838 | TATACTTCAGCCATT TCAG CCG CTGA TTTTTGAACTCTCTG Swoo_1245 1583300 - 1583986 + | DNA repair protein RecO TERM 1525 1584376 - 1584361 - f 78 -10.4 -3.1478 | overlap 1584359 ACTATTTCATGAAGA CCGCCA TGGA TGGCGG GAATGTCGTTAATGC Swoo_1246 1584526 - 1585263 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1526 1585267 - 1585302 + F 79 -9.8 -3.41394 | overlap 1585265 1585269 AGAGGCGAATAGGCT CCTCAGTTCCTAGGAC CTAG GTTCTAGGAACTGATC TCTTCTCTGATTTTA TERM 1527 1585269 - 1585300 + F 100 -16.8 -3.2575 | overlap 1585267 1585265 AGGCGAATAGGCTCC TCAGTTCCTAGGAC CTAG GTTCTAGGAACTGA TCTCTTCTCTGATTT Swoo_1247 1585327 - 1585725 + | holo-acyl-carrier-protein synthase TERM 1528 1586814 - 1586780 - g 76 -6.4 -4.58724 | opp_overlap 1586779, overlap 1586781 TAAAGATAAGCAAAA CGGCACCCGCGTTA TCTCCTC TACCGCAGATGCCA CTCACTTTGCTAACT Swoo_1248 1585911 - 1587743 + | hypothetical protein Swoo_1249 1587838 - 1588062 + | hypothetical protein TERM 1529 1588107 - 1588122 + F 100 -9 -5.93252 | opp_overlap 1588106 1588107 AAGACTCCAGAAAAG CCACCT AACA AGGTGG TTTTTTGTTTTTACG TERM 1530 1588122 - 1588107 - f 72 -9 -3.24848 | opp_overlap 1588107, overlap 1588106 AAGACTCCAGAAAAG CCACCT AACA AGGTGG TTTTTTGTTTTTACG TERM 1531 1588555 - 1588566 + G 74 -2.2 -5.21236 | AAGGTGCGCTTTGGA TAGC CCTT GCTG TTTTTGTTATCGGTT TERM 1532 1588739 - 1588729 - g 71 -8.2 -3.80279 | opp_overlap 1588728 1588735 TGGATAAACAGATAA CGCC GAT GGCG GTTGATAAACGCCGT Swoo_1250 1588245 - 1588790 + | hypothetical protein TERM 1533 1588822 - 1588840 + T 100 -11.7 -4.43879 | opp_overlap 1588822 TAGATAATCAAAAAA GCGAGCC ACTTA GGCTCGC TTTTAGTTAGCTAGT TERM 1534 1588840 - 1588822 - T 100 -11.7 -5.35354 | opp_overlap 1588822 TAGATAATCAAAAAA GCGAGCC ACTTA GGCTCGC TTTTAGTTAGCTAGT Swoo_1251 1590146 - 1588872 - | hypothetical protein Swoo_1252 1591099 - 1590311 - | cytochrome c assembly protein Swoo_1253 1591417 - 1592790 + | signal recognition particle protein TERM 1535 1592844 - 1592803 - f 86 -11.5 -3.71148 | opp_overlap 1592808, overlap 1592808 TAAAATCTAGTTAAA TTGAAGGCTCGGGTTGGGC ATTA GCCTAGCCCGAGCCTTTTA TTTTAGTGGTCAAAA TERM 1536 1592808 - 1592839 + F 100 -20.2 -5.14626 | opp_overlap 1592803 1592808 TCTAGTTAAATTGAA GGCTCGGGTTGGGC ATTA GCCTAGCCCGAGCC TTTTATTTTAGTGGT TERM 1537 1592839 - 1592808 - f 100 -15.8 -3.29324 | opp_overlap 1592808, overlap 1592803 TCTAGTTAAATTGAA GGCTCGGGTTGGGC ATTA GCCTAGCCCGAGCC TTTTATTTTAGTGGT TERM 1538 1592908 - 1592937 + F 83 -4.1 -5.54338 | GTCCGGCTTTCTACA CTGGGACACTTCG CGAA CACGGAGTCCCAG TTTTTATTTTGCTTC Swoo_1254 1592985 - 1593236 + | ribosomal protein S16 Swoo_1255 1593257 - 1593787 + | 16S rRNA processing protein RimM TERM 1539 1594295 - 1594323 + G 84 -9.5 -4.27467 | overlap 1594296 CTCGGTAAGCAAGCT TCGGCAGAGCAGG ACT CCTTCTCTGACGG TTTATTGGATTGTCC TERM 1540 1594296 - 1594322 + G 78 -10.8 -3.15757 | overlap 1594295 TCGGTAAGCAAGCTT CGGCAGAGCAGG ACT CCTTCTCTGACG GTTTATTGGATTGTC Swoo_1256 1593803 - 1594549 + | tRNA (guanine-N1)-methyltransferase Swoo_1257 1594585 - 1594938 + | ribosomal protein L19 TERM 1541 1594975 - 1595008 + F 95 -13.9 -3.05844 | opp_overlap 1594984, overlap 1594978 1594984 AAAGACGCAGTGTTC GCACAATAACCCGCC AATA GGCGGGTTTTTGTGA TCTTGGGGTAAGGAA TERM 1542 1594978 - 1595005 + F 95 -14.2 -2.75074 | opp_overlap 1594984, overlap 1594975 1594984 GACGCAGTGTTCGCA CAATAACCCGCC AATA GGCGGGTTTTTG TGATCTTGGGGTAAG TERM 1543 1594999 - 1594984 - f 86 -11.8 -3.78934 | opp_overlap 1594984 1594978 1594975 GTGTTCGCACAATAA CCCGCC AATA GGCGGG TTTTTGTGATCTTGG TERM 1544 1594984 - 1594999 + F 100 -11.8 -4.98436 | opp_overlap 1594984, overlap 1594978 1594975 GTGTTCGCACAATAA CCCGCC AATA GGCGGG TTTTTGTGATCTTGG TERM 1545 1595140 - 1595167 + F 71 -4.2 -4.70626 | overlap 1595139 TAGTTAGCTCTTGAT TGTAATGGTGTA GCAT TACAGCTTTACA TTTTTAAGCTTATTG Swoo_1258 1595246 - 1596337 + | phospho-2-dehydro-3-deoxyheptonate aldolase Swoo_1259 1596392 - 1597531 + | chorismate mutase TERM 1546 1597573 - 1597588 + F 93 -10.4 -4.91873 | opp_overlap 1597573 CGCTATGTAATGAAA GGGAGC TTTG GCTCCC TTTTTCGTTCCTGTC TERM 1547 1597588 - 1597573 - f 85 -10.4 -3.93288 | opp_overlap 1597573 CGCTATGTAATGAAA GGGAGC TTTG GCTCCC TTTTTCGTTCCTGTC TERM 1548 1598936 - 1598950 + G 78 -10 -3.62046 | GTAATGCTTTGATGG CAGCAG CTC CTGCTG TTATTGAAAACGTGA Swoo_1260 1597789 - 1599447 + | hybrid cluster protein TERM 1549 1599468 - 1599495 + F 78 -9.2 -3.63018 | overlap 1599469 AAGCCTATATCGAGA CTGGCCAAGACT TTCA AGTCTTGGTCAA TTGTCTCTAATACTT TERM 1550 1599469 - 1599494 + F 90 -12.7 -2.77088 | overlap 1599468 AGCCTATATCGAGAC TGGCCAAGACT TTCA AGTCTTGGTCA ATTGTCTCTAATACT Swoo_1261 1599576 - 1600673 + | ferredoxin TERM 1551 1600994 - 1601008 + G 79 -2.8 -5.37593 | GATTGGCTTTGCAAT CTTAGC TGG GTTAGG TTTTTTCCTTTCACC Swoo_1262 1600788 - 1601123 + | hypothetical protein TERM 1552 1601163 - 1601146 - T 100 -9.9 -5.38951 | opp_overlap 1601146 AATTGAGATAAAAAA TGAGGAC CTAG GTCCTCA TTTTTTTGGGTAATA TERM 1553 1601146 - 1601163 + T 100 -9.9 -5.48825 | opp_overlap 1601146 AATTGAGATAAAAAA TGAGGAC CTAG GTCCTCA TTTTTTTGGGTAATA Swoo_1263 1603175 - 1601187 - | chorismate mutase TERM 1554 1602239 - 1602251 + g 73 -4.8 -4.66953 | opp_overlap 1602230 1602231, overlap 1602231 CTAAAAGGGCCTCTA CCAG AGCGC CTGG TTTTTGGCCTGTTGC TERM 1555 1603398 - 1603415 + r 75 -8.3 -3.76815 | opp_overlap 1603398 TCCTGACACAAAAAA GCCCCCC TAGT GGGAGGC TTTGGAATTTTCACT TERM 1556 1603415 - 1603398 - R 100 -10.5 -5.36441 | opp_overlap 1603398 TCCTGACACAAAAAA GCCCCCC TAGT GGGAGGC TTTGGAATTTTCACT TERM 1557 1603877 - 1603859 - R 100 -11.7 -5.36441 | TCCCGACATAAAAAA GCGCACC ATGAA GGTGCGC TCTAGATGAAAATAT Swoo_1264 1604919 - 1604557 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 1558 1604977 - 1604992 + H 84 -7.6 -4.7268 | opp_overlap 1604976 CTCCACAGCGAAAGT CGTGAT CTTG ATCACG TTTTCTTAGCTCTTT Swoo_1265 1605208 - 1605876 + | cytochrome B561 TERM 1559 1605921 - 1605886 - T 91 -10 -4.77036 | gap 1, opp_overlap 1605889 1605892 CTGTAGCATTAAAAA CAATAAGCCTGA-TG ACTTGTG CACTCAGGCTTATTG TCGTCAGTGTCACTT Swoo_1266 1606396 - 1605935 - | cytochrome c prime TERM 1560 1606721 - 1606698 - g 70 -2.5 -4.91109 | gap 1 TGTGTATTAGAAAAA GTCGTGAGTC ATCAA GA-TCACAAC GCGCTAATTGAGCTA Swoo_1267 1606665 - 1606943 + | Trp operon repressor Swoo_1268 1607320 - 1606940 - | hypothetical protein TERM 1561 1607390 - 1607428 + r 100 -14.7 -4.2704 | opp_overlap 1607395, overlap 1607395 CATATTCTAGCCGAA AAAAAGCCCACTGCATG GATAA CATGCAGTGGGCTTATA TTTATTCGTAATGAG TERM 1562 1607395 - 1607423 + r 100 -19 -3.98448 | opp_overlap 1607395, overlap 1607390 TCTAGCCGAAAAAAA GCCCACTGCATG GATAA CATGCAGTGGGC TTATATTTATTCGTA TERM 1563 1607423 - 1607395 - R 100 -19 -5.44119 | opp_overlap 1607395 1607390 TCTAGCCGAAAAAAA GCCCACTGCATG GATAA CATGCAGTGGGC TTATATTTATTCGTA Swoo_1269 1608108 - 1607485 - | peptidylprolyl isomerase FKBP-type TERM 1564 1608130 - 1608147 + H 84 -6.2 -5.1963 | opp_overlap 1608124 TCCAATTCAGAATGT GGGCGC ATTCTA GCGCTC TTTTTATTCATTGGC TERM 1565 1608606 - 1608585 - H 70 -8.7 -3.1585 | overlap 1608583 TCAGTTAACTTAATA TTTGGGGCT TGAC AGCCCCATA GAAAAAAAGCAATTC TERM 1566 1608730 - 1608707 - H 71 -8.1 -3.45023 | CCACCATTATTACAA CCACCACGA TTACAT TCGTGGGGG CAGGCTAAACGTACT TERM 1567 1608793 - 1608768 - H 100 -14 -3.52073 | opp_overlap 1608768 TTTTGAATATGACAA GCCCGCTCCC ACACCA AGGAGCGGGC TTTTTTGTTTCTTAG TERM 1568 1608768 - 1608793 + H 100 -13.3 -5.80003 | opp_overlap 1608768 TTTTGAATATGACAA GCCCGCTCC CACACCAA GGAGCGGGC TTTTTTGTTTCTTAG Swoo_1270 1608836 - 1611301 + | aspartate kinase Swoo_1271 1611387 - 1612322 + | homoserine kinase Swoo_1272 1612350 - 1613630 + | threonine synthase TERM 1569 1613645 - 1613675 + F 78 -10.7 -3.10164 | gap 1, opp_overlap 1613653, overlap 1613653 GTGTTTGAACTTATT TATAAAAAGGAGGG CGTA CCCTCCTTTTT-TA TTAGCTAGTGAATGA TERM 1570 1613668 - 1613653 - f 93 -10.4 -4.88067 | opp_overlap 1613653 1613645 ACTTATTTATAAAAA GGAGGG CGTA CCCTCC TTTTTTATTAGCTAG TERM 1571 1613653 - 1613668 + F 100 -10.4 -5.4833 | opp_overlap 1613653, overlap 1613645 ACTTATTTATAAAAA GGAGGG CGTA CCCTCC TTTTTTATTAGCTAG TERM 1572 1613844 - 1613863 + F 76 -2.8 -5.49568 | overlap 1613846 CTGCTTCAAATAATT GGTGTGAT CTCT GTCACAAC TTTTTGTTTTCAATT TERM 1573 1614121 - 1614105 - g 90 -12.3 -3.29613 | overlap 1614100 AAACGCGAAAGTCAA CGCCATG AAT CATGGCG AAGAGTTGGGAGGTA Swoo_1273 1613920 - 1614213 + | hypothetical protein Swoo_1274 1615096 - 1614227 - | apurinic endonuclease Apn1 TERM 1574 1614659 - 1614678 + g 72 -5.7 -4.52589 | TGCGGTATTTTCAAT CACAGCG GTGACA TGCTGTG TTTTGTCTAACGCCA Swoo_1275 1615234 - 1617273 + | PAS/PAC sensor hybrid histidine kinase Swoo_1276 1617391 - 1618485 + | response regulator receiver protein TERM 1575 1618492 - 1618504 + F 76 -5.5 -4.92777 | overlap 1618501 GTCTCTTAATGTTGG GGGGA TTA TCTCC TTTTTAGTTGATCTT TERM 1576 1618770 - 1618754 - g 85 -10.9 -3.727 | opp_overlap 1618748 TTGAGTATATGCAAA GCTATGC AGA GCATAGC CATCATCCTTTAGAG Swoo_1277 1618606 - 1619163 + | hemerythrin HHE cation binding domain-containing protein TERM 1577 1619448 - 1619419 - T 93 -13.1 -2.87881 | gap 1, opp_overlap 1619420 1619426, overlap 1619426 TAAGTGTTCCAGACA CAAAAAAGAGCGCA TTA TGCGCTCTTTTT-G ATCTTGATATTTTAC TERM 1578 1619420 - 1619448 + T 91 -13.3 -2.59607 | opp_overlap 1619419 1619426, overlap 1619426 AAGTGTTCCAGACAC AAAAAAGAGCGCA TTA TGCGCTCTTTTTG ATCTTGATATTTTAC TERM 1579 1619442 - 1619426 - T 100 -12.3 -5.4251 | opp_overlap 1619426 1619420, overlap 1619419 TCCAGACACAAAAAA GAGCGCA TTA TGCGCTC TTTTTGATCTTGATA TERM 1580 1619426 - 1619442 + T 100 -12.3 -4.89233 | opp_overlap 1619419 1619426, overlap 1619420 TCCAGACACAAAAAA GAGCGCA TTA TGCGCTC TTTTTGATCTTGATA Swoo_1278 1619645 - 1619460 - | hypothetical protein TERM 1581 1619855 - 1619823 - R 79 -10.2 -3.39668 | gap 1, opp_overlap 1619831, overlap 1619831 TCTGAAATTTGAGAA TA-AAAAAAGCCAGT AAAA ACTGGCTTTTTTCTA AAAATCGACTACGGC TERM 1582 1619831 - 1619846 + r 100 -9 -5.252 | opp_overlap 1619823 1619831 TTGAGAATAAAAAAA GCCAGT AAAA ACTGGC TTTTTTCTAAAAATC TERM 1583 1619846 - 1619831 - R 100 -9 -5.88565 | opp_overlap 1619831, overlap 1619823 TTGAGAATAAAAAAA GCCAGT AAAA ACTGGC TTTTTTCTAAAAATC Swoo_1279 1621509 - 1619872 - | glucose-6-phosphate isomerase TERM 1584 1621344 - 1621334 - G 70 -5.4 -4.32649 | opp_overlap 1621334 AGTTTAAAAAGTAAA GAGA GTG TCTC TTCTGTCGCTCTATT Swoo_1280 1622481 - 1621525 - | transaldolase TERM 1585 1622733 - 1622694 - R 100 -17.4 -2.82516 | opp_overlap 1622704, overlap 1622704 CTCGCTATCATTACA GATAAAAAAAGTCGCTGC CAAG GCAGCGACTTTTTTAACC AAAGAGCAAGAAGCG TERM 1586 1622704 - 1622723 + r 100 -13.6 -5.00616 | opp_overlap 1622694 1622704 TTACAGATAAAAAAA GTCGCTGC CAAG GCAGCGAC TTTTTTAACCAAAGA TERM 1587 1622723 - 1622704 - R 100 -13.6 -5.76633 | opp_overlap 1622704, overlap 1622694 TTACAGATAAAAAAA GTCGCTGC CAAG GCAGCGAC TTTTTTAACCAAAGA Swoo_1281 1623854 - 1622751 - | OmpA/MotB domain-containing protein TERM 1588 1624035 - 1624074 + r 78 -9.7 -3.26844 | gap 2, opp_overlap 1624026 1624043, overlap 1624043 CACAAGTTTTTTGTA TAA-AAAAAGGTGTA-CCC AGAA GGGATACACCTTTTTATTA ATTTTACTTAATGAA TERM 1589 1624065 - 1624043 - R 100 -9.9 -5.60993 | opp_overlap 1624035 1624043 TTTTGTATAAAAAAA GGTGTACCC AGAAG GGATACACC TTTTTATTAATTTTA TERM 1590 1624043 - 1624065 + r 100 -8.5 -5.28166 | gap 1, opp_overlap 1624043, overlap 1624035 TTTTGTATAAAAAAA GGTGTA-CCC AGAA GGGATACACC TTTTTATTAATTTTA Swoo_1282 1626464 - 1624098 - | phosphoketolase Swoo_1283 1626896 - 1628353 + | amino acid carrier protein TERM 1591 1628425 - 1628408 - f 93 -11.3 -5.15969 | opp_overlap 1628408 GTGCAATCTAAAAAA CCACGCT TAAT AGCGTGG TTTTTTTATGTTGGT TERM 1592 1628408 - 1628425 + F 100 -11.3 -5.82172 | opp_overlap 1628408 GTGCAATCTAAAAAA CCACGCT TAAT AGCGTGG TTTTTTTATGTTGGT Swoo_1284 1628483 - 1629253 + | hypothetical protein TERM 1593 1629264 - 1629281 + T 70 -7 -3.8049 | overlap 1629262 AATAATAAATTTGTC GGCCTT CAAATA AAGGCC TATTTCATTTTTTGG TERM 1594 1629418 - 1629428 + T 75 -8.2 -3.84246 | overlap 1629398 TGAAGCCATCCTTGG CCGC TCT GCGG TTTCATCCTTGAAAC Swoo_1285 1629947 - 1629696 - | hypothetical protein TERM 1595 1630472 - 1630462 - R 71 -8.2 -3.54459 | opp_overlap 1630470 1630471 GGAAGCTGCCGTAAA GCCC ACA GGGC AGAAAATGTTCCAGA TERM 1596 1630952 - 1630936 - R 75 -9.5 -3.33573 | AGCAATAAGCAGCAA TGAAGGT AAG ACCTTCA AACACATTACCAAAT Swoo_1286 1632505 - 1631105 - | peptidase M28 TERM 1597 1632405 - 1632427 + g 70 -6.3 -4.27259 | overlap 1632404 TGCTGCTGTAACTGT TCGGAAATC TGAAT GTTTTCCGA TTTTGGCTGTGTGTG Swoo_1287 1632641 - 1632937 + | ArsR family transcriptional regulator TERM 1598 1632968 - 1632992 + T 100 -11.6 -5.77988 | opp_overlap 1632968 TATTGGTATTAAAAA CTGACAAAAC TGACT GTTTTGTCAG TTTTTTTATGTCTGT TERM 1599 1632992 - 1632968 - T 100 -11.6 -4.72986 | opp_overlap 1632968 TATTGGTATTAAAAA CTGACAAAAC TGACT GTTTTGTCAG TTTTTTTATGTCTGT TERM 1600 1633054 - 1633026 - T 75 -9.8 -3.01188 | gap 1, opp_overlap 1633034, overlap 1633034 ATTAAAATTTAGACA TAAAAAAACCGGC CTAA GCCGG-TTTTTTA TCGCAAAACTCAGAA TERM 1601 1633047 - 1633034 - T 100 -9.5 -5.76633 | opp_overlap 1633034, overlap 1633026 TTAGACATAAAAAAA CCGGC CTAA GCCGG TTTTTTATCGCAAAA TERM 1602 1633034 - 1633047 + T 100 -9.5 -5.24129 | opp_overlap 1633034 1633026 TTAGACATAAAAAAA CCGGC CTAA GCCGG TTTTTTATCGCAAAA Swoo_1288 1633336 - 1633070 - | ribosomal protein S20 TERM 1603 1633205 - 1633234 + g 72 -5.8 -4.48299 | gap 1 TTCAGTCGCCGCAGC GTGATCGCCAGCT TGAAT AGCTG-CGATAAC TTTCTTTACGTATGA TERM 1604 1633854 - 1633864 + G 70 -5.4 -4.30809 | CTCAAAAGTAACGGG TACC TTA GGTA TTTTGGTGAGTGTTG Swoo_1289 1633582 - 1635141 + | integral membrane protein MviN TERM 1605 1636111 - 1636085 - g 74 -9.4 -3.29109 | AAAATTCGAGATGAA CAGCCTTTCCAG TCT CTGGAAGCGCTG AGAAAACAAATTAAC Swoo_1290 1635239 - 1636174 + | riboflavin biosynthesis protein RibF Swoo_1291 1636207 - 1639029 + | isoleucyl-tRNA synthetase TERM 1606 1639041 - 1639063 + F 100 -14.2 -5.35459 | opp_overlap 1639038 1639034 TTAAATAGGTAATTG CAACGGCTCT TGA GGAGCCGTTG TTTTTTCTGCTATCT Swoo_1292 1639152 - 1639682 + | lipoprotein signal peptidase Swoo_1293 1639688 - 1640110 + | peptidylprolyl isomerase, FKBP-type TERM 1607 1640284 - 1640294 + G 73 -4.6 -4.83169 | opp_overlap 1640284 GCAAAACTTGAAAGA TCGC GGT GCGG TTTTTGTAGAAGAGT Swoo_1294 1640114 - 1641061 + | hydroxymethylbutenyl pyrophosphate reductase TERM 1608 1641091 - 1641107 + F 100 -12.3 -5.43414 | opp_overlap 1641094 TAATTTTTAGTTTAA GGAGGCT CAT AGCCTCC TTTTTTATGTCTGAT TERM 1609 1641558 - 1641571 + G 70 -9.5 -2.85999 | TCGTGTGATGTTGCT GCGGG TGGC CCCGC TGTGGTCTGCACTAA Swoo_1295 1641300 - 1641866 + | type IV pilus modification protein PilV Swoo_1296 1641867 - 1642847 + | type IV pilus assembly protein PilW Swoo_1297 1642895 - 1643323 + | type IV pilus assembly protein PilX TERM 1610 1645745 - 1645758 + G 72 -6.7 -4.28361 | opp_overlap 1645744 AAATGGATTATAACT CCTGA TAGT TCAGG TTTTGCTGAGCTTGG Swoo_1298 1643327 - 1646887 + | type IV pilin biogenesis protein, putative Swoo_1299 1646902 - 1647288 + | Type IV pilus biogenesis protein PilE Swoo_1300 1647288 - 1647578 + | hypothetical protein Swoo_1301 1648123 - 1647590 - | type IV pilus biogenesis protein, putative Swoo_1302 1648773 - 1648264 - | type IV pilus biogenesis protein, putative Swoo_1303 1649019 - 1649357 + | nitrogen regulatory protein P-II TERM 1611 1649390 - 1649410 + T 93 -11.2 -4.87893 | opp_overlap 1649390 AGTTTTATATGAAAA TGCCGCAA ATCTA TTGCGGCA TTTTTAATTCCAGTT TERM 1612 1649410 - 1649390 - T 88 -11.2 -4.3467 | opp_overlap 1649390 AGTTTTATATGAAAA TGCCGCAA ATCTA TTGCGGCA TTTTTAATTCCAGTT Swoo_1304 1650459 - 1649437 - | LacI family transcription regulator TERM 1613 1649541 - 1649555 + g 77 -2.1 -5.38497 | CTATCAGTAACTCAG TGGCT ATTTG AGCTA TTTTTTGATTTGGCT Swoo_1305 1650851 - 1653553 + | TonB-dependent receptor TERM 1614 1653598 - 1653569 - f 79 -10.9 -2.94365 | opp_overlap 1653576, overlap 1653576 TTATATTTGATAAAG TAAAAAACCCAGT CTTG ACTGGGTTTTTTT TTAGGAGTCATTTAT TERM 1615 1653576 - 1653591 + F 100 -9 -6.07627 | opp_overlap 1653576 1653569 TGATAAAGTAAAAAA CCCAGT CTTG ACTGGG TTTTTTTTTAGGAGT TERM 1616 1653591 - 1653576 - f 100 -9 -5.42514 | opp_overlap 1653576, overlap 1653569 TGATAAAGTAAAAAA CCCAGT CTTG ACTGGG TTTTTTTTTAGGAGT TERM 1617 1655093 - 1655135 + G 78 -10 -3.57119 | opp_overlap 1655093, overlap 1655083 1655126 1655128 GTTAAGCCATAAAAG TTGGCTATTAGGGTTAAAAG CAG CTATGAGCCCTAATGGCTAA TTTAGCCACTATCTA Swoo_1306 1653612 - 1655135 + | tryptophan halogenase Swoo_1307 1655995 - 1655279 - | SapC family protein TERM 1618 1655651 - 1655623 - G 71 -3.9 -4.81083 | opp_overlap 1655643 CGGAATCATCAAAAA GCTTATTACCT TCATCTG AGGTGACAAGC TCACTATCTTCATCG Swoo_1308 1656984 - 1656091 - | hypothetical protein TERM 1619 1656949 - 1656961 + g 93 -2.7 -5.77734 | GAATAGAGGTCTTGA GATGA GCG TTATC TTTTTGTTTTTGTTT TERM 1620 1657372 - 1657417 + H 76 -5.6 -4.85599 | overlap 1657373 1657375 1657409 CCCCAGAAACTAGTC TTGGCTAAGTGTTATCTTCA TCATTT TGAATTTAACACTTAGCTAC TTTTTCTAAGGTAGC TERM 1621 1657373 - 1657416 + H 74 -9.1 -3.50877 | overlap 1657372 1657375 1657409 CCCAGAAACTAGTCT TGGCTAAGTGTTATCTTCA TCATTT TGAATTTAACACTTAGCTA CTTTTTCTAAGGTAG TERM 1622 1657375 - 1657414 + H 75 -9.5 -3.32317 | overlap 1657373 1657372 1657409 CAGAAACTAGTCTTG GCTAAGTGTTATCTTCA TCATTT TGAATTTAACACTTAGC TACTTTTTCTAAGGT Swoo_1309 1657525 - 1658400 + | type IV pilus assembly protein PilM TERM 1623 1659223 - 1659208 - g 76 -4 -5.055 | gap 1, overlap 1659197 1659186 TGAAGTGGCAAAAAA TGCCAGT TCA AC-GGCA GAAGCTACTGGCTTG Swoo_1310 1658393 - 1659886 + | methyl-accepting chemotaxis sensory transducer TERM 1624 1660259 - 1660232 - g 71 -9.4 -3.04517 | gap 1, overlap 1660231 AGGCCTGTGCAAAAG GTGTTATCT-GAA GAG TTCGAGATAACAC GGGTGAAGGGGGATC TERM 1625 1661680 - 1661696 + G 78 -10.9 -3.14132 | TGCCTACTTTGTTGA GCGTGTT TCA AACACGC TTAATGACAAAGGAA Swoo_1311 1659911 - 1662577 + | Beta-N-acetylhexosaminidase TERM 1626 1662622 - 1662591 - f 70 -8.8 -3.06087 | opp_overlap 1662592, overlap 1662582 AACATATGCCTAACA GGTGTGACTTTGTC GTTC GATAAAGTCACACT TCAGTTAAGCCTCTT TERM 1627 1662592 - 1662621 + F 95 -14.5 -3.17901 | opp_overlap 1662591 1662582 ACATATGCCTAACAG GTGTGACTTTGTC GTTC GATAAAGTCACAC TTCAGTTAAGCCTCT TERM 1628 1662692 - 1662705 + F 81 -5.3 -5.19328 | opp_overlap 1662692 GATATAAAAAGTAAA TGACA ACGC TGTCA TTTTTATTGTAACAT Swoo_1312 1662798 - 1663700 + | ATPase BadF/BadG/BcrA/BcrD type TERM 1629 1664174 - 1664162 - g 81 -6.2 -5.00616 | TCTGTCCCCAAAAAA GGGG TACAT CCCC AATCTCATATCCGCC Swoo_1313 1663763 - 1664890 + | N-acetylglucosamine-6-phosphate deacetylase TERM 1630 1664944 - 1664920 - f 76 -9.9 -3.18913 | opp_overlap 1664920 AATATAGATACTTAA GCCTCAACGGC CTT GCTGTTGGGGC TTTATGCTATAGAAA TERM 1631 1664920 - 1664944 + F 100 -14.3 -4.0162 | opp_overlap 1664920 AATATAGATACTTAA GCCTCAACGGC CTT GCTGTTGGGGC TTTATGCTATAGAAA Swoo_1314 1664998 - 1666134 + | hypothetical protein TERM 1632 1666210 - 1666221 + F 81 -4.4 -5.46129 | opp_overlap 1666210 TTTCAAATACAAAAT GACA GCGT TGTC TTTTTTGCTTTATTG Swoo_1315 1666379 - 1667686 + | glucose/galactose transporter TERM 1633 1667727 - 1667711 - f 90 -12.3 -3.70919 | opp_overlap 1667711 GCTAAAGTTTAAGAA GGAGCCT TTA AGGCTCC TTTTTTATTTCTCCG TERM 1634 1667711 - 1667727 + F 100 -12.3 -5.72622 | opp_overlap 1667711 GCTAAAGTTTAAGAA GGAGCCT TTA AGGCTCC TTTTTTATTTCTCCG TERM 1635 1667742 - 1667776 + F 75 -9.5 -3.33009 | gap 1, opp_overlap 1667773, overlap 1667773 CTTTTTTATTTCTCC GT-ATTGCTAAGAGCT GTAA AGCTCTTAGCAAGGAC TTGTAGCCCATTTTG TERM 1636 1668032 - 1668015 - f 91 -7 -5.4251 | opp_overlap 1668015 TTTAGACATAAAAAA GCCACT AATTAA AGTGGC TTAATGCTCTTCACA TERM 1637 1668155 - 1668138 - f 91 -7 -5.4251 | opp_overlap 1668138 TCTAGATACAAAAAA GCCACT AATTAA AGTGGC TTGATGCTCTTCACA TERM 1638 1668281 - 1668265 - f 100 -12.3 -5.4251 | opp_overlap 1668258 1668256 TTTAGATACAAAAAA GCCACTC AAA GAGTGGC CTAATCGTATATGGT TERM 1639 1668393 - 1668376 - f 91 -7 -5.4251 | opp_overlap 1668376 TCTAGACACAAAAAA GCCACT AATAAA AGTGGC TTGATGCTCTTCACA TERM 1640 1668648 - 1668664 + F 71 -9.5 -2.62616 | opp_overlap 1668650, overlap 1668650 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA TERM 1641 1669068 - 1669050 - f 100 -8.1 -5.7827 | opp_overlap 1669048 1669050 AATAGAAATAAAAAA GCCCCGA CATTT TCAGGGC TATTACTCTTCACAA TERM 1642 1669190 - 1669173 - f 91 -7 -5.4251 | opp_overlap 1669173 TCTAGACACAAAAAA GCCACT AATTAA AGTGGC TTGATGCTCTTCACA TERM 1643 1669315 - 1669299 - f 100 -12.3 -5.4251 | opp_overlap 1669292 1669290 TCTAGATACAAAAAA GCCACTC AAA GAGTGGC CTAATCGTATATGGT TERM 1644 1669426 - 1669412 - f 100 -10 -5.76633 | TTAGATACAAAAAAA CCACTC AAA GAGTGG CCTAATCGTATATGG TERM 1645 1669555 - 1669571 + F 71 -9.5 -2.62616 | opp_overlap 1669557, overlap 1669557 TCGAACCAGGGACAC GAGGATT TTC AATCCTC TGCTCTACCGACTGA Swoo_1316 1669957 - 1670508 + | cytochrome B561 Swoo_1317 1670582 - 1671157 + | YceI family protein Swoo_1318 1671770 - 1671492 - | Fe(II) trafficking protein YggX TERM 1646 1671588 - 1671608 + g 87 -4.8 -5.38249 | overlap 1671589 1671605 TAAAAAGCCTCTATC TTCAACAT TCATC ATGTTGAG TTTTTTCTCATTAAT Swoo_1319 1672921 - 1671773 - | A/G-specific adenine glycosylase Swoo_1320 1673092 - 1673808 + | tRNA (guanine-N(7)-)-methyltransferase Swoo_1321 1673862 - 1674185 + | hypothetical protein TERM 1647 1674212 - 1674233 + G 76 -8 -4.18018 | opp_overlap 1674211 GCATTACTGGAACAG GTGGTCGA TAAAGT TCGGCCAC TTTTAGGTCAGGGGA Swoo_1322 1674185 - 1675099 + | glutaminase TERM 1648 1675223 - 1675235 + F 79 -7.7 -4.22949 | overlap 1675219 TTACTTTAATTGTTG GCACA GCT TGTGC TTTATATCTCTTATA Swoo_1323 1675328 - 1676158 + | hypothetical protein TERM 1649 1676161 - 1676144 - f 77 -6.3 -4.83615 | GATGCGCCACAAAAA GAGCTAC TTGA GTAACTC ATAAAGGCACAACTT TERM 1650 1676215 - 1676238 + F 100 -11.8 -5.38497 | opp_overlap 1676215 CCCAATTTGCAACCA CCCCGTATTT ATAT GAATACGGGG TTTTTTCGTTTGGGT TERM 1651 1676238 - 1676215 - f 78 -11.1 -2.73542 | opp_overlap 1676215 CCCAATTTGCAACCA CCCCGTATT TATATG AATACGGGG TTTTTTCGTTTGGGT Swoo_1324 1676497 - 1677438 + | LysR family transcriptional regulator TERM 1652 1677493 - 1677462 - T 86 -10.2 -4.25676 | opp_overlap 1677465, overlap 1677465 AATTAAACGTCAAAA TAACGCCTTTAGGA TAGC TCCTGAAGGCGTTT TTTATTGTCTAAAGA TERM 1653 1677490 - 1677465 - T 95 -11.9 -4.2354 | opp_overlap 1677465, overlap 1677462 TAAACGTCAAAATAA CGCCTTTAGGA TAGC TCCTGAAGGCG TTTTTTATTGTCTAA TERM 1654 1677465 - 1677490 + T 100 -14.1 -5.60689 | opp_overlap 1677465 1677462 TAAACGTCAAAATAA CGCCTTTAGGA TAGC TCCTGAAGGCG TTTTTTATTGTCTAA TERM 1655 1677940 - 1677961 + T 100 -13.1 -5.06816 | ATCCTAGTTTTGGTT TACCCCAGT TTAT ACTGGGGTA TTTTTCTTCAAGGAT TERM 1656 1678070 - 1678054 - T 80 -8 -4.43576 | opp_overlap 1678054 AGTAGAGACAAGAAA GCCACA TTAAT TGTGGC TTTTTTATTTAGAGG TERM 1657 1678054 - 1678070 + T 100 -8 -5.63517 | opp_overlap 1678054 AGTAGAGACAAGAAA GCCACA TTAAT TGTGGC TTTTTTATTTAGAGG Swoo_1325 1679940 - 1678096 - | hypothetical protein Swoo_1326 1681237 - 1680101 - | oxygen-independent coproporphyrinogen III oxidase Swoo_1327 1681928 - 1681326 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Swoo_1328 1682492 - 1682058 - | hypothetical protein Swoo_1329 1682843 - 1682556 - | hypothetical protein TERM 1658 1682807 - 1682826 + g 70 -9.3 -3.19463 | opp_overlap 1682801 1682810 GGATATATAGGTTAA GCAGCAG ATCATC CTGCTGC TTGATAACTGGTGCC Swoo_1330 1683391 - 1682843 - | protein of unknown function YGGT Swoo_1331 1684267 - 1683449 - | pyrroline-5-carboxylate reductase Swoo_1332 1685132 - 1684398 - | alanine racemase domain-containing protein TERM 1659 1684758 - 1684780 + g 77 -3.5 -5.27923 | CAGAGTGTCAGGTCT TTGCTCA TTTAAACGT TGAGCAA TTTTTTCTCGGCTTA Swoo_1333 1685136 - 1686173 + | twitching motility protein TERM 1660 1686203 - 1686214 + G 80 -5.8 -5.06103 | ATAAGGCTTTATTAT GGAC GTTC GTCC TTTTTTAAAAATTAT Swoo_1334 1686201 - 1687313 + | twitching motility protein TERM 1661 1687391 - 1687413 + F 100 -9.9 -5.27923 | opp_overlap 1687390, overlap 1687382 GTGGCCGCTCAATAG GGCTCTTGT GATAA ACAAGGGCC TTTTTTATGCGCTTA Swoo_1335 1687547 - 1688578 + | ferrochelatase TERM 1662 1688613 - 1688593 - T 89 -9.7 -4.57209 | opp_overlap 1688596, overlap 1688596 AGATGAAGCAGAAAA GAAGGGAGC CTA GCTCCCTTT TTAACGCCTGCTTCA TERM 1663 1688596 - 1688610 + T 100 -11.4 -4.58663 | opp_overlap 1688596 1688593 TGAAGCAGAAAAGAA GGGAGC CTA GCTCCC TTTTTAACGCCTGCT TERM 1664 1688610 - 1688596 - T 100 -11.4 -4.38322 | opp_overlap 1688596, overlap 1688593 TGAAGCAGAAAAGAA GGGAGC CTA GCTCCC TTTTTAACGCCTGCT Swoo_1336 1689057 - 1688638 - | Holliday junction resolvase YqgF Swoo_1337 1689685 - 1689125 - | hypothetical protein TERM 1665 1689726 - 1689710 - R 73 -6.6 -4.24285 | overlap 1689714 CACATAGGGAATAAA GTTAGC AGAGG GCTAAC TTAACCACCGGCAAG Swoo_1338 1690056 - 1689727 - | translation initiation factor SUI1 Swoo_1339 1690559 - 1690245 - | hypothetical protein TERM 1666 1690584 - 1690598 + H 70 -5.8 -4.24075 | opp_overlap 1690593 CCTTCAGGTCTTAAC TGATAA TCA TTATCA TTTGTATTGATAAGT TERM 1667 1691226 - 1691216 - g 70 -6.8 -4.03995 | TCCGTGATAAAAATA CTCC AGA GGAG CGCATTGAGGTGGTT Swoo_1340 1690729 - 1691298 + | hypothetical protein TERM 1668 1691319 - 1691351 + F 91 -12.9 -3.2082 | opp_overlap 1691311 1691317 1691327, overlap 1691327 AGCTAAATTAAAACT TTTAAAAAGCGACCA ACA TGGTCGCTTTTTTGA TCTCGTTTTTGATCT TERM 1669 1691343 - 1691327 - f 100 -12.3 -4.66264 | opp_overlap 1691319 1691327 TAAAACTTTTAAAAA GCGACCA ACA TGGTCGC TTTTTTGATCTCGTT TERM 1670 1691327 - 1691343 + F 100 -12.3 -5.2422 | opp_overlap 1691327, overlap 1691319 TAAAACTTTTAAAAA GCGACCA ACA TGGTCGC TTTTTTGATCTCGTT TERM 1671 1691773 - 1691783 + G 79 -6.8 -4.63928 | CAGCTGGATCTTGTG CAGC GAC GCTG TTTTTACGATCCTCT Swoo_1341 1691479 - 1691931 + | hypothetical protein TERM 1672 1691954 - 1691992 + T 70 -8.2 -3.35746 | opp_overlap 1691960, overlap 1691957 TACTGAATAGCCTAT ATGAAAGTCGCAGCTTTA CAT TAAAGCTGCGACTGATAA TTGCTGTGATTTACT TERM 1673 1691957 - 1691989 + T 86 -12.1 -2.83634 | opp_overlap 1691960, overlap 1691954 TGAATAGCCTATATG AAAGTCGCAGCTTTA CAT TAAAGCTGCGACTGA TAATTGCTGTGATTT TERM 1674 1691986 - 1691960 - T 100 -18.2 -3.84266 | opp_overlap 1691957 1691954 ATAGCCTATATGAAA GTCGCAGCTTTA CAT TAAAGCTGCGAC TGATAATTGCTGTGA Swoo_1342 1692881 - 1692003 - | LysR family transcriptional regulator Swoo_1343 1692967 - 1693377 + | transmembrane pair domain-containing protein TERM 1675 1693575 - 1693556 - f 70 -5 -4.5464 | overlap 1693558 TATATAGAATTAAAA GGTTAAGC GGAA GCTTAAGC TGGTGGGTAAATATG Swoo_1344 1693588 - 1694160 + | OmpA/MotB domain-containing protein TERM 1676 1694243 - 1694257 + F 74 -8.6 -3.67175 | opp_overlap 1694243 1694242 TTAGTAATAATAAAG CCAAAC TTG GTTTGG TTCATTTTAGGGAGT TERM 1677 1694257 - 1694243 - f 72 -8.6 -3.28505 | opp_overlap 1694243, overlap 1694242 TTAGTAATAATAAAG CCAAAC TTG GTTTGG TTCATTTTAGGGAGT Swoo_1345 1694279 - 1695103 + | MscS mechanosensitive ion channel TERM 1678 1695133 - 1695160 + T 91 -12.8 -2.91924 | opp_overlap 1695138, overlap 1695138 TCACTTTCAGACACA AAAAAGGTCGGC AATT GCCGACCTTTTC ATTTATGCCAAATCC TERM 1679 1695155 - 1695138 - T 100 -12.7 -5.4251 | opp_overlap 1695133 1695138 TTCAGACACAAAAAA GGTCGGC AATT GCCGACC TTTTCATTTATGCCA TERM 1680 1695138 - 1695155 + T 100 -12.7 -4.61873 | opp_overlap 1695138, overlap 1695133 TTCAGACACAAAAAA GGTCGGC AATT GCCGACC TTTTCATTTATGCCA Swoo_1346 1695835 - 1695194 - | hypothetical protein TERM 1681 1696834 - 1696822 - g 75 -9.1 -3.57144 | opp_overlap 1696833 CGCCTCATCGCGAAA GCCAG ACG CTGGC GTAAAATGCTTGGTG Swoo_1347 1696174 - 1697184 + | threonine aldolase TERM 1682 1697234 - 1697209 - T 79 -9.1 -4.16016 | opp_overlap 1697214, overlap 1697214 TTAGGTTTTAATAAA GAAAAGTCTGC ATCT GCAGACTTTTT TATTTTTAGTGCGCA TERM 1683 1697229 - 1697214 - T 91 -9 -5.09762 | opp_overlap 1697214, overlap 1697209 TTTTAATAAAGAAAA GTCTGC ATCT GCAGAC TTTTTTATTTTTAGT TERM 1684 1697214 - 1697229 + T 100 -9 -5.95286 | opp_overlap 1697214 1697209 TTTTAATAAAGAAAA GTCTGC ATCT GCAGAC TTTTTTATTTTTAGT Swoo_1348 1698016 - 1697240 - | hypothetical protein TERM 1685 1698065 - 1698042 - R 100 -14 -3.92522 | opp_overlap 1698064 CTTTAATTGGATAAA GGTCACTCAA TCTC TTGAGTGACC TTCAGAACCTAAGGT Swoo_1349 1699712 - 1698081 - | alkaline phosphatase Swoo_1350 1701233 - 1699743 - | alkaline phosphatase TERM 1686 1702964 - 1703001 + G 71 -8.5 -3.44672 | overlap 1702962 1702961 AGATAGCTATTTTAG GGGCTGTGCCATTTA CCTTAATT TTAATGGCACAGACC TGTATTTTACTCAAA Swoo_1351 1701535 - 1703058 + | BCCT transporter Swoo_1352 1703892 - 1703089 - | ABC-type phosphate/phosphonate transport system periplasmic component-like protein TERM 1687 1703650 - 1703666 + g 75 -10.9 -2.90029 | opp_overlap 1703652, overlap 1703649 1703652 ACGGCTGGCTTCTAA TACTGGC GTG GCCAGTA GTTCTATTTCGCTGC TERM 1688 1704670 - 1704655 - g 82 -9 -4.2679 | TAATGTGGATGAAAA GGGCTT GCCT AAGCCC CACGGTATAAGGGCA Swoo_1353 1704329 - 1704697 + | thioesterase superfamily protein TERM 1689 1704792 - 1704745 - T 72 -9.2 -2.87132 | opp_overlap 1704754 1704778 CGGTGTGCCTATATA CCCAAGCTACCTCAAGATGC TGAATCTT GCACCTTGAAGCTGTTTGGG TATAGCATCAATCTT Swoo_1354 1705015 - 1704800 - | hypothetical protein Swoo_1355 1705380 - 1705018 - | hypothetical protein TERM 1690 1705503 - 1705517 + H 70 -2.8 -5.05782 | AGTCATTGCTCTTTA GAGTTG GTC TGACTC TTTTTTAACATGAGT TERM 1691 1705651 - 1705673 + H 72 -2.1 -5.20222 | GAGGTTTATTACCTA TCAGTAA AGCAGATAC TTACTGA TTTTATTTGTTTAGT TERM 1692 1706600 - 1706583 - g 72 -8.5 -3.63895 | opp_overlap 1706597, overlap 1706596 1706597 TTCAAGTAGCTGAAA GAGCATT GATC AATGCTC GTGAGAGCTTTGCTA Swoo_1356 1705934 - 1707097 + | RND family efflux transporter MFP subunit TERM 1693 1707121 - 1707133 + F 93 -4.9 -5.8187 | CAAGGAAAAGGTTAA TCATT ATG AATGA TTTTTTTATTGGCTC TERM 1694 1707152 - 1707167 + F 70 -7.6 -3.65199 | TTTTATTGGCTCGGT CCTAAG TTTG CTTAGG TTTGAGTCGAAAGTT TERM 1695 1707304 - 1707318 + F 79 -2.1 -5.5112 | TGGTGACAGGGGATC GTCAT GATTA GTGAC TTTTTTATTAATAGG Swoo_1357 1707307 - 1710429 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1696 1710463 - 1710482 + F 100 -12.2 -4.71791 | opp_overlap 1710463 TTACTTACACGTAAA GGCTCATC AGAT GATGAGCC TTTCTTTATTGGTAT TERM 1697 1710482 - 1710463 - f 90 -12.2 -3.71873 | opp_overlap 1710463 TTACTTACACGTAAA GGCTCATC AGAT GATGAGCC TTTCTTTATTGGTAT Swoo_1358 1710719 - 1710931 + | cold-shock DNA-binding domain-containing protein TERM 1698 1710979 - 1710954 - T 80 -7.5 -4.50976 | opp_overlap 1710958, overlap 1710958 CTCTAGACTATAAAA TTAAGACCGCC CATG GGCGGTCTTTT TTGTGCCTGAATTTT TERM 1699 1710958 - 1710975 + T 100 -12.7 -5.28176 | opp_overlap 1710954 1710958 AGACTATAAAATTAA GACCGCC CATG GGCGGTC TTTTTTGTGCCTGAA TERM 1700 1710975 - 1710958 - T 95 -12.7 -3.77905 | opp_overlap 1710958, overlap 1710954 AGACTATAAAATTAA GACCGCC CATG GGCGGTC TTTTTTGTGCCTGAA TERM 1701 1711036 - 1711010 - T 100 -16.8 -5.80817 | opp_overlap 1711010 TTGAACATAAAAAAA GCCCAAGATTAT TAA ATAATCTTGGGC TTTTTAGTGTGCTAA TERM 1702 1711010 - 1711036 + T 100 -16.8 -4.82667 | opp_overlap 1711010 TTGAACATAAAAAAA GCCCAAGATTAT TAA ATAATCTTGGGC TTTTTAGTGTGCTAA TERM 1703 1711228 - 1711208 - T 72 -9.1 -3.35679 | opp_overlap 1711208 GGTTTTTATCGATAA GTAAAACTG ATT CAGCTTTAC TTGGCTAGAGTGCGT Swoo_1359 1712381 - 1711233 - | iron-containing alcohol dehydrogenase TERM 1704 1712933 - 1712914 - g 75 -4.3 -4.91459 | overlap 1712915 CAAGAGGCACAAAAA CGAGAGA AAGCGA TCTCTCA AGCAGATAAGCCCCC Swoo_1360 1712746 - 1713897 + | porin Swoo_1361 1714462 - 1713983 - | YbaK/prolyl-tRNA synthetase associated region Swoo_1362 1715033 - 1714560 - | hypothetical protein Swoo_1363 1715624 - 1715445 - | hypothetical protein Swoo_1364 1716169 - 1715783 - | GCN5-related N-acetyltransferase Swoo_1365 1716521 - 1717633 + | RND family efflux transporter MFP subunit Swoo_1366 1717633 - 1720740 + | acriflavin resistance protein TERM 1705 1720782 - 1720803 + F 100 -11.7 -5.03314 | opp_overlap 1720782 GGAATTATTTATAAA GGGTAAACA GAGC TGTTTACCC TTTTTTACAGCTACA TERM 1706 1720803 - 1720782 - f 90 -11.7 -3.95153 | opp_overlap 1720782 GGAATTATTTATAAA GGGTAAACA GAGC TGTTTACCC TTTTTTACAGCTACA TERM 1707 1722114 - 1722087 - g 72 -7.9 -3.9578 | opp_overlap 1722110 AGAGATCGCAAAGAA TGCGGTTAAAA GTATCA TTTTAACCACA CCGAGTGTCGATTTT Swoo_1367 1721248 - 1724886 + | undecaprenol kinase, rRNA (guanine-N(1)-)-methyltransferase Swoo_1368 1724919 - 1725218 + | hypothetical protein Swoo_1369 1725251 - 1725637 + | hypothetical protein Swoo_1370 1726419 - 1725685 - | short chain dehydrogenase/reductase family oxidoreductase TERM 1708 1726035 - 1726050 + g 71 -4.8 -4.56597 | AGGGGATTGAACTGG TTAACA GTGG TGTTAA TTTTTGCAGCCACAG Swoo_1371 1726878 - 1726468 - | hypothetical protein Swoo_1372 1727032 - 1727280 + | hypothetical protein Swoo_1373 1727292 - 1727507 + | hypothetical protein Swoo_1374 1728654 - 1727530 - | metallophosphoesterase Swoo_1375 1728833 - 1729786 + | beta-lactamase domain-containing protein TERM 1709 1729881 - 1729897 + F 81 -9.5 -3.92996 | ATTTGGTGTTGTGTT TGAAGGT TGT ACCTTCA TTGTTATCTATCGCC Swoo_1376 1730301 - 1730837 + | hypothetical protein Swoo_1377 1731818 - 1731030 - | hypothetical protein Swoo_1378 1732204 - 1733181 + | hypothetical protein TERM 1710 1733954 - 1733944 - T 73 -8.2 -3.6215 | opp_overlap 1733953 GGAAGTTATTGGAAA CCGC AGA GCGG CCAAGGATGGACTCT TERM 1711 1734178 - 1734159 - T 100 -10 -5.61881 | GGGTAAAAACAAAAA GCCACCCT ATAA AGAGTGGC TAGTCATTATTCTGA Swoo_1379 1735873 - 1734209 - | ABC transporter related TERM 1712 1736195 - 1736175 - H 81 -9.7 -3.73775 | GTGATTGTGATCAAA TGCGCTGTA GAA TACCGCGCA ACCCTACTATAAGTA TERM 1713 1736253 - 1736242 - g 73 -3 -5.055 | overlap 1736252 GCAATGCTGAAAAAA GATA TGAA TATC GCGGACTTTGATCCA Swoo_1380 1736230 - 1737486 + | glycine hydroxymethyltransferase TERM 1714 1737516 - 1737536 + F 100 -12.6 -5.03994 | overlap 1737512 TCAGGTAAACTTCGG TGGCCGCT TTTAT AGCGGCCA TTTTTGTATCTGACG Swoo_1381 1737636 - 1738085 + | ATP-cone domain-containing protein Swoo_1382 1738109 - 1739248 + | riboflavin biosynthesis protein RibD Swoo_1383 1739252 - 1739914 + | riboflavin synthase, alpha subunit Swoo_1384 1739986 - 1741089 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1715 1741212 - 1741200 - g 70 -6.3 -4.21607 | TTTAGGTAAGATAAA TGAAC GTA GTTCA AGGTAATATCGAGTC TERM 1716 1741449 - 1741463 + G 77 -11.4 -2.50127 | overlap 1741448 1741447 TAGGTGCAGTTATCC GTGGCG GTA CGCCAC ACTTTGATTTTGTTG Swoo_1385 1741199 - 1741681 + | 6,7-dimethyl-8-ribityllumazine synthase Swoo_1386 1741690 - 1742094 + | NusB antitermination factor TERM 1717 1742104 - 1742121 + F 100 -11.3 -6.15717 | opp_overlap 1742103 1742102 AAGTAATACAACAGG CGGCATC TTTG GATGCCG TTTTTTTTGTCTTTC TERM 1718 1742971 - 1742959 - g 82 -7.7 -4.56597 | TGCTTCTCTTAAAAA CTCTG TAA CAGAG GAGGAAGCACTGAGT Swoo_1387 1742228 - 1743187 + | thiamine-monophosphate kinase Swoo_1388 1743187 - 1743681 + | phosphatidylglycerophosphatase A TERM 1719 1743708 - 1743725 + F 100 -12.7 -4.62622 | CTGCTGTACTTTTTA GGGCCCT ATAG AGGGCCC TTTATTTATACTTAC TERM 1720 1743851 - 1743867 + F 83 -7.3 -4.91573 | TAAAATATTTATCGC CCAGTTG ATT TAACTGG TTTTTACTGTCTTTT TERM 1721 1744253 - 1744263 + G 72 -6.8 -4.27259 | ATCTCAATTTTAATG GCTG TTT CAGC TTTTAAATCTATCTC TERM 1722 1745621 - 1745600 - g 74 -3.7 -5.02357 | overlap 1745602 GAGAAGCAAAGAAAA CAGCCTCAA CTGT TTGAGACTC CTGAAGATATTTAAT Swoo_1389 1744142 - 1745635 + | hypothetical protein TERM 1723 1745669 - 1745703 + T 100 -15.3 -3.87994 | gap 1, opp_overlap 1745674, overlap 1745674 TGCTTAATCGTGAGT TAAAAGAGCCAGAAGG TTAA CCT-CTGGCTCTTTTA TTTATACCAATCAGT TERM 1724 1745698 - 1745674 - T 95 -12.2 -4.18762 | opp_overlap 1745669 1745674 AATCGTGAGTTAAAA GAGCCAGAAG GTTAA CCTCTGGCTC TTTTATTTATACCAA TERM 1725 1745674 - 1745698 + T 93 -10.8 -4.99043 | gap 1, opp_overlap 1745674, overlap 1745669 AATCGTGAGTTAAAA GAGCCAGAAGG TTAA CCT-CTGGCTC TTTTATTTATACCAA Swoo_1390 1746994 - 1745975 - | 4-hydroxy-2-oxovalerate aldolase TERM 1726 1746538 - 1746550 + g 70 -5.5 -4.41047 | overlap 1746535 CCATCAACTTGGCTT GCTCT AGC AGGGC TTTTGGTTCAAGCAT Swoo_1391 1747980 - 1747018 - | acetaldehyde dehydrogenase (acetylating) Swoo_1392 1748800 - 1748009 - | 4-oxalocrotonate decarboxylase TERM 1727 1748452 - 1748477 + g 70 -9.9 -2.9296 | gap 1, opp_overlap 1748454, overlap 1748454 CATTTGGCCCTTTAA GATCGGCCTTTA AGA TAAAGG-CGATC TCTCCTTCGGATTTG Swoo_1393 1749033 - 1749959 + | LysR family transcriptional regulator TERM 1728 1750220 - 1750203 - f 84 -4.3 -5.52096 | AAAGTTAATAAAAAA TATTTAT AACA ATAAATA CAGGAAAGGAAATCT TERM 1729 1752874 - 1752856 - g 74 -11 -2.73994 | opp_overlap 1752856 1752855, overlap 1752853 ATTGGCTCAATAGCA GTGACGCC TTC GGCATCAC CTTTTGGATTGTTTC Swoo_1394 1750240 - 1753569 + | hypothetical protein TERM 1730 1753606 - 1753620 + T 100 -11.4 -5.46276 | opp_overlap 1753606 TACTATTTGATAAAA GGGCTC TTA GAGCCC TTTTTTATATCTCTT TERM 1731 1753620 - 1753606 - T 100 -11.4 -4.40804 | opp_overlap 1753606 TACTATTTGATAAAA GGGCTC TTA GAGCCC TTTTTTATATCTCTT Swoo_1395 1754607 - 1754092 - | hypothetical protein Swoo_1396 1755248 - 1754628 - | lysine exporter protein LysE/YggA Swoo_1397 1755724 - 1755248 - | hypothetical protein TERM 1732 1755773 - 1755753 - R 100 -9 -5.4111 | opp_overlap 1755752 1755753 AATAATTATAAAAAA GGAGCGAT ATGAA ATCGCCCC ATTTTTAGTTAGAAA TERM 1733 1755813 - 1755789 - R 74 -7.9 -3.92075 | overlap 1755802 ATTTTTAGTTAGAAA GTTTAGCTAGA AAG CCTAGCTAGAC AAAGTTAAGTTAGAA Swoo_1398 1757396 - 1755870 - | putative lipoprotein Swoo_1399 1757750 - 1758967 + | fibronectin type III domain-containing protein TERM 1734 1759030 - 1759009 - T 100 -11.7 -4.38712 | opp_overlap 1759009 GTTAGGGGTAGAAAA GCCATCAAT ATCT ATTGATGGC TTTTTTCATTTGAAT TERM 1735 1759009 - 1759030 + T 100 -11.7 -5.38497 | opp_overlap 1759009 GTTAGGGGTAGAAAA GCCATCAAT ATCT ATTGATGGC TTTTTTCATTTGAAT Swoo_1400 1759657 - 1759118 - | hypothetical protein TERM 1736 1760675 - 1760712 + H 73 -2.8 -5.34309 | overlap 1760676 TTGAATCAGAAATGG GTGACTGAGTAAATTT ATCGCA AAATTTTCTCAGCCAG TTTTTATTTAATGAT Swoo_1401 1760723 - 1761574 + | hypothetical protein TERM 1737 1761939 - 1761920 - T 88 -8.6 -4.83677 | opp_overlap 1761935 AAAATAAAATGAAAA CCACCTTC ATTT AAAGGTGG CTAACCCATCTGTTT Swoo_1402 1762914 - 1761940 - | putative esterase TERM 1738 1762478 - 1762461 - G 71 -10.5 -2.71268 | opp_overlap 1762460, overlap 1762458 CGGCATGAGATACGA GCCACGC AAGG GCGCGGC GGTTCTGCTCTACGA Swoo_1403 1763775 - 1762915 - | tryptophan 23-dioxygenase Swoo_1404 1765148 - 1763778 - | kynurenine 3-monooxygenase Swoo_1405 1766433 - 1765141 - | kynureninase Swoo_1406 1767228 - 1766443 - | 4-oxalocrotonate decarboxylase TERM 1739 1767166 - 1767204 + g 71 -2.3 -5.09895 | gap 1, overlap 1767189 AGTGGTTGAGGAGAG CTGGGCTATGCTGGCTGC ATCT GCGGCT-GCCTGGTCGAG TTTTTTGGCTAAATC Swoo_1407 1768309 - 1767290 - | aminocarboxymuconate-semialdehyde decarboxylase Swoo_1408 1768875 - 1768306 - | 3-hydroxyanthranilate 3,4-dioxygenase Swoo_1409 1769406 - 1768978 - | endoribonuclease L-PSP Swoo_1410 1770937 - 1769471 - | 2-hydroxymuconic semialdehyde dehydrogenase Swoo_1411 1771533 - 1772882 + | sodium:neurotransmitter symporter TERM 1740 1774890 - 1774879 - g 77 -4.4 -5.12707 | opp_overlap 1774879 1774874 TGAAACCTCAAAAAA CCTA AGTT TAGG TTTTGTGCTTAATCC Swoo_1412 1773104 - 1775647 + | TonB-dependent receptor TERM 1741 1775706 - 1775686 - f 85 -9.7 -4.04576 | opp_overlap 1775686 ACTTATAGAACTAAA GCCATCGAG TCT CTAGATGGC TTTTTCATTTGGTTA TERM 1742 1775686 - 1775706 + F 93 -9.7 -5.04222 | opp_overlap 1775686 ACTTATAGAACTAAA GCCATCGAG TCT CTAGATGGC TTTTTCATTTGGTTA Swoo_1413 1775853 - 1777061 + | methyltransferase type 11 TERM 1743 1777088 - 1777130 + T 75 -10.1 -3.00298 | gap 1, opp_overlap 1777081 1777079, overlap 1777079 1777077 GGAATAGACCTGTAT CAGGCCCATTTTATTCA-AC CAGA GTATGAATAAAATGGGCCAC TGTCTGCTTAAAACA Swoo_1414 1778249 - 1777167 - | multicopper oxidase type 3 Swoo_1415 1778610 - 1778239 - | cytochrome c class I Swoo_1416 1779365 - 1778607 - | hypothetical protein Swoo_1417 1780365 - 1779421 - | multicopper oxidase type 3 TERM 1744 1780504 - 1780514 + r 74 -5.4 -4.70107 | TTTTTAGTGTTTAAT GTCA TGT TGAC TTTGTTATTTTGATA Swoo_1418 1781090 - 1780539 - | hypothetical protein Swoo_1419 1781265 - 1782071 + | hypothetical protein TERM 1745 1782157 - 1782125 - T 81 -5.5 -5.26119 | opp_overlap 1782125 1782127, overlap 1782127 TGCTTAAAAACAAAA GACACCGCAGGAT TGATGAC ATCGCGCGGTGGC TTTCTTTTCACTATT TERM 1746 1782155 - 1782127 - T 73 -6.7 -4.25502 | opp_overlap 1782125 1782127, overlap 1782125 CTTAAAAACAAAAGA CACCGCAGGAT TGATGAC ATCGCGCGGTG GCTTTCTTTTCACTA Swoo_1420 1783877 - 1782240 - | PfaD family protein TERM 1747 1784029 - 1784051 + r 88 -3.4 -5.80727 | overlap 1784047 TTAGGGGATATTTAA GTTAGAGGTT TTA AGTCTCAAAC TTTTTTGTTATTTTT TERM 1748 1784071 - 1784099 + r 90 -8.2 -4.90918 | overlap 1784073 TTGTTATTTTTAGTT CAGTGAGTAGCG TTAAT TGCTACTCACTC TTTTCTTAATTTTGT TERM 1749 1784073 - 1784097 + r 86 -10.8 -4.04459 | overlap 1784071 GTTATTTTTAGTTCA GTGAGTAGCG TTAAT TGCTACTCAC TCTTTTCTTAATTTT Swoo_1421 1790102 - 1784247 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ TERM 1750 1785790 - 1785801 + g 75 -4.4 -5.00138 | GCATTTTCAAGTGGC TGGA AGCG TCCA TTTTTGGTTTGAGTG TERM 1751 1788447 - 1788432 - G 72 -10.4 -2.89323 | AAAACTGTCGACATA GGCTCC TTTG GGAGCC GCGCTTAAACCAAAT TERM 1752 1788755 - 1788743 - G 70 -5.5 -4.30396 | AACCAAATACAGAAA CGCCA GCG TGACG TTGAGCATTGCCTGT TERM 1753 1788984 - 1789022 + g 75 -8.3 -3.79419 | gap 1 CGCCTGATTGCCAGC GAGCTTACCTTCAAAGAA GGTC TCCATTG-AGGTAAGCTC TATTTTATCACCCAG Swoo_1422 1792372 - 1790102 - | PfaB family protein TERM 1754 1790270 - 1790290 + g 89 -11.9 -3.6715 | opp_overlap 1790269, overlap 1790287 TAATGCCTTAAGTAG GGTGGTGAT ATC ATCACCGCC TTTGGCATTAACTGG TERM 1755 1791209 - 1791164 - G 73 -10.5 -3.09273 | gap 1 GGCTTGGAACATAGA CTTCAAGTCTCCCTCACGCTCA AGT TGAGCGT-AGAGTGACGGGAAG TATCCATGCAATTCA TERM 1756 1792164 - 1792195 + g 82 -8.9 -4.18401 | opp_overlap 1792158 1792172 TCAAAATCATCGACC TTGATAGAGACAA GCTCTG TTGTCTCTAGCAA TTTTGAGCTGTATAG TERM 1757 1792294 - 1792329 + g 70 -10.5 -2.57244 | opp_overlap 1792298, overlap 1792298 GTGAGGCAGGCAGCA CCAAGAGTGCGATGC GCAGGG GCATCTCACTCTTGA TAACTTGCTCACTGA TERM 1758 1792298 - 1792325 + g 72 -9.9 -3.22884 | opp_overlap 1792298, overlap 1792294 GGCAGGCAGCACCAA GAGTGCGATGC GCAGGG GCATCTCACTC TTGATAACTTGCTCA TERM 1759 1792325 - 1792298 - G 72 -9.9 -3.22298 | opp_overlap 1792298 1792294 GGCAGGCAGCACCAA GAGTGCGATGC GCAGGG GCATCTCACTC TTGATAACTTGCTCA Swoo_1423 1800624 - 1792372 - | polyketide-type polyunsaturated fatty acid synthase PfaA TERM 1760 1793942 - 1793957 + g 74 -8.2 -4.0825 | overlap 1793914 ATATGCGCAATCGCT GCGGGC TTTA GCTCGC TTATTTGCTTACCCG TERM 1761 1794117 - 1794128 + g 76 -5.8 -4.79174 | CAATAGAGTTAAGCT CTGC TTTG GCAG TTTTGTTACTTGCCT TERM 1762 1796628 - 1796661 + g 70 -9.7 -2.84723 | gap 1, overlap 1796625 GTGTACGGCACTCGG CTAGATCT-TCAGGGC TTA GCTCTGGCAGATCTGG TAGTTCATCTTGAAC TERM 1763 1799031 - 1799051 + g 71 -10.5 -2.7186 | opp_overlap 1799031 TTAACTCAGCGATAA GTGCATCTT TTG AGGATGCAC TGATTAAGAAGCTTT TERM 1764 1800640 - 1800660 + r 83 -9.7 -4.0156 | overlap 1800643 TATGAGTCTCCACTG GGTGCCTGA GAT TCAGGCGTC TTGTTGTTAGTCTCA TERM 1765 1800643 - 1800657 + r 74 -10 -2.7438 | overlap 1800640 GAGTCTCCACTGGGT GCCTGA GAT TCAGGC GTCTTGTTGTTAGTC Swoo_1424 1801490 - 1800624 - | transcriptional regulator, putative TERM 1766 1801451 - 1801461 + g 74 -3.2 -5.07486 | GCTTATCCGAATTTA TCTG CTC CGGA TTTTTGTTCACACTA Swoo_1425 1802056 - 1802445 + | hypothetical protein TERM 1767 1802507 - 1802537 + T 79 -8.3 -4.18494 | opp_overlap 1802511, overlap 1802509 1802511 TAAATCATATTAGAA AAAATGCAGCCTC TCTAT GAGGCTGCATCTA TTTTACATAAGACTG TERM 1768 1802509 - 1802535 + T 83 -10.9 -3.69216 | opp_overlap 1802511, overlap 1802507 1802511 AATCATATTAGAAAA AATGCAGCCTC TCTAT GAGGCTGCATC TATTTTACATAAGAC TERM 1769 1802533 - 1802511 - T 100 -13.5 -5.34555 | opp_overlap 1802509 1802507 1802511 TCATATTAGAAAAAA TGCAGCCTC TCTAT GAGGCTGCA TCTATTTTACATAAG TERM 1770 1802511 - 1802533 + T 100 -13.5 -3.42605 | opp_overlap 1802511, overlap 1802509 1802507 TCATATTAGAAAAAA TGCAGCCTC TCTAT GAGGCTGCA TCTATTTTACATAAG Swoo_1426 1805469 - 1802560 - | TonB-dependent receptor TERM 1771 1805643 - 1805659 + H 70 -7.3 -3.74101 | overlap 1805641 TTTGTTATCTAGGAG TGGCGTT TTT AATGCCA TATTTGTTACATTTG Swoo_1427 1805725 - 1806144 + | hypothetical protein Swoo_1428 1806254 - 1807057 + | hypothetical protein TERM 1772 1808370 - 1808384 + G 76 -10 -3.40566 | overlap 1808383 AGTTGATGCTGGAGA TGGGCT GGG AGCCCA TTATCCCTATGATGT Swoo_1429 1807295 - 1808530 + | hypothetical protein Swoo_1430 1808523 - 1809809 + | hypothetical protein Swoo_1431 1809899 - 1810582 + | ABC transporter related Swoo_1432 1810579 - 1811856 + | hypothetical protein Swoo_1433 1811978 - 1812940 + | zinc carboxypeptidase-related protein TERM 1773 1812949 - 1812982 + T 89 -10.6 -4.386 | gap 1, opp_overlap 1812958, overlap 1812958 GCTTTAGGCTTTCTT TATAAAAAACGCAGC GTAAA GCTGCGTTTTTT-TA TTTTATAGCAGATTA TERM 1774 1812958 - 1812974 + T 100 -9.4 -6.14618 | opp_overlap 1812958, overlap 1812949 TTTCTTTATAAAAAA CGCAGC GTAAA GCTGCG TTTTTTTATTTTATA TERM 1775 1812974 - 1812958 - T 100 -9.4 -5.24129 | opp_overlap 1812958 1812949 TTTCTTTATAAAAAA CGCAGC GTAAA GCTGCG TTTTTTTATTTTATA Swoo_1434 1815256 - 1812995 - | TonB-dependent receptor TERM 1776 1815377 - 1815413 + rH 100 -16.9 -3.84825 | opp_overlap 1815383, overlap 1815376 1815383 CAATATAGACAGGCT TGCAAACGATTGCAA TTACTTT TTGCAATCGTTTGCA TTTGGTGTGGATAGG TERM 1777 1815407 - 1815383 - RH 74 -8.7 -3.5525 | opp_overlap 1815376 1815377 1815383 AGACAGGCTTGCAAA CGATTGCAA TTACTTT TTGCAATCG TTTGCATTTGGTGTG TERM 1778 1815383 - 1815407 + rH 79 -8.7 -3.8822 | opp_overlap 1815383, overlap 1815376 1815377 AGACAGGCTTGCAAA CGATTGCAA TTACTTT TTGCAATCG TTTGCATTTGGTGTG Swoo_1436 1817130 - 1816429 - | beta-phosphoglucomutase Swoo_1435 1815480 - 1816499 + | LacI family transcription regulator Swoo_1437 1819509 - 1817143 - | Kojibiose phosphorylase TERM 1779 1819560 - 1819585 + H 85 -6.3 -5.44721 | overlap 1819562 CATACTCATCTATTG CATTTTTGCAA ACGA TTGCAAAAATA TTTTTTTACGCTAGT TERM 1780 1819562 - 1819583 + H 83 -8.9 -4.36089 | overlap 1819560 TACTCATCTATTGCA TTTTTGCAA ACGA TTGCAAAAA TATTTTTTTACGCTA TERM 1781 1820129 - 1820147 + G 80 -4.6 -5.1861 | overlap 1820130 1820131 AGTCTCATGCCGCCT TTCTCAAT ACT ATTGAGGG TTTTTTCATGGTGGG TERM 1782 1820533 - 1820548 + G 70 -6.1 -4.17762 | TGTTTGGCGTTAGGC CGCCT AAGCGC AGGCG TTATTTTGAAACGTA Swoo_1438 1819738 - 1820985 + | major facilitator transporter TERM 1783 1821144 - 1821156 + G 78 -6.3 -4.67904 | GAAAACCTATCACTG TTTCC GAC GGAAA TTTTTGAACTTGCTG Swoo_1439 1821066 - 1822493 + | serine/threonine protein kinase Swoo_1440 1822819 - 1822520 - | hypothetical protein Swoo_1441 1824750 - 1822816 - | potassium efflux system protein Swoo_1442 1825393 - 1824776 - | NAD(P)H dehydrogenase (quinone) TERM 1784 1825548 - 1825559 + H 90 -2.2 -5.96219 | TTTTTTATTTTTTTA GGGT TATT ACTC TTTTTTTTGTGCCTA TERM 1785 1826040 - 1826050 + H 83 -5.4 -5.37593 | ATTGTAGTGGTATTT TTGC CGT GCAA TTTTTTGATTTCAGA Swoo_1443 1826080 - 1826658 + | PhnA protein TERM 1786 1826715 - 1826689 - f 70 -8.7 -3.18383 | opp_overlap 1826689 AGTTGTACTGATTAA CCGCTATGCTC TTATT GAACATGGCGG TTTTTTATATGTAGA TERM 1787 1826689 - 1826715 + F 100 -8.7 -5.4251 | opp_overlap 1826689 AGTTGTACTGATTAA CCGCTATGCTC TTATT GAACATGGCGG TTTTTTATATGTAGA Swoo_1444 1826760 - 1827215 + | hypothetical protein TERM 1788 1827601 - 1827587 - f 72 -8.6 -3.3323 | opp_overlap 1827584 1827596 TAATATTAAACTTAA GTTTGG TAT CCAAAC AAATGTTTGGTCGTT Swoo_1445 1827634 - 1828725 + | ribokinase-like domain-containing protein Swoo_1446 1828719 - 1829633 + | indigoidine synthase A family protein TERM 1789 1829684 - 1829645 - f 95 -13.8 -2.9039 | opp_overlap 1829649 1829658, overlap 1829647 1829658 ATAGCAGTTGATATA TAGTCATAAAAAAGCGCC TTAG GGCGCTTTTTTATGTTTA GTTCGTTTGGTGCTA TERM 1790 1829682 - 1829647 - f 87 -12 -3.002 | opp_overlap 1829649 1829658, overlap 1829645 1829658 AGCAGTTGATATATA GTCATAAAAAAGCGCC TTAG GGCGCTTTTTTATGTT TAGTTCGTTTGGTGC TERM 1791 1829649 - 1829680 + F 100 -19 -4.04997 | opp_overlap 1829647 1829645 1829658, overlap 1829658 CAGTTGATATATAGT CATAAAAAAGCGCC TTAG GGCGCTTTTTTATG TTTAGTTCGTTTGGT TERM 1792 1829658 - 1829671 + F 100 -9.5 -5.5762 | opp_overlap 1829647 1829645 1829658, overlap 1829649 TATAGTCATAAAAAA GCGCC TTAG GGCGC TTTTTTATGTTTAGT TERM 1793 1829671 - 1829658 - f 100 -9.5 -5.29782 | opp_overlap 1829658 1829649, overlap 1829647 1829645 TATAGTCATAAAAAA GCGCC TTAG GGCGC TTTTTTATGTTTAGT Swoo_1447 1829778 - 1830188 + | glutathione-dependent formaldehyde-activating GFA Swoo_1450 1831550 - 1832032 + | hypothetical protein TERM 1794 1832412 - 1832444 + G 75 -9.2 -3.70405 | opp_overlap 1832410 1832409 ATAGGATTGAAAGCT GATTTTGCCACCTT AATTA AAGGTGGCAAACCC TTACTTATTTTAATC Swoo_1451 1832139 - 1833383 + | sodium/glutamate symporter TERM 1795 1833432 - 1833419 - T 82 -8.1 -4.25104 | opp_overlap 1833413 1833419 TTGTGTGGATGAAAA GGAGC TAAG GCTCC TTTTTGGTTTCAGAT TERM 1796 1833419 - 1833432 + T 90 -8.1 -4.99134 | opp_overlap 1833419, overlap 1833413 TTGTGTGGATGAAAA GGAGC TAAG GCTCC TTTTTGGTTTCAGAT Swoo_1452 1833892 - 1833455 - | UspA domain-containing protein Swoo_1454 1835490 - 1835251 - | hypothetical protein TERM 1797 1835566 - 1835578 + H 100 -7.7 -5.64873 | opp_overlap 1835566 1835565 AGATAAGCGTTAAAG CAGCT ATT AGCTG TTTTTTCTTGTTAAC Swoo_1455 1835648 - 1835815 + | hypothetical protein Swoo_1457 1836811 - 1841082 + | YD repeat-containing protein Swoo_1458 1841082 - 1842257 + | hypothetical protein TERM 1798 1842600 - 1842586 - g 100 -2.8 -5.97575 | AATGTATAAAAAAAA TGAGCT TAA AGCTAA ATTGAAGAAAATAGA Swoo_1459 1842260 - 1842832 + | hypothetical protein Swoo_1460 1842957 - 1843553 + | hypothetical protein Swoo_1461 1843691 - 1844032 + | hypothetical protein TERM 1799 1844229 - 1844211 - g 80 -11.8 -2.91728 | overlap 1844206 AGTGGTAAGATCACA TCGCTGAT GGC ATCAGCGA CAAACCCTGCGATAA Swoo_1462 1844109 - 1844450 + | hypothetical protein TERM 1800 1844807 - 1844817 + G 86 -3.2 -5.58179 | TATAAAAAAGAATAA TGGC AAA GCTA TTTTTTATTATGGTG Swoo_1463 1844559 - 1844903 + | hypothetical protein Swoo_1464 1845065 - 1845406 + | hypothetical protein Swoo_1465 1845574 - 1845912 + | hypothetical protein Swoo_1466 1845909 - 1846235 + | hypothetical protein TERM 1801 1846517 - 1846500 - g 71 -4.9 -4.51363 | gap 1, opp_overlap 1846509 GATCAAAGATGAAAA CTC-TACC TAT GGTAAGAG CCAGTTTAGTATGTT Swoo_1467 1846300 - 1846635 + | hypothetical protein Swoo_1468 1846733 - 1847080 + | hypothetical protein Swoo_1469 1847117 - 1847497 + | triosephosphate isomerase Swoo_1470 1847555 - 1847932 + | hypothetical protein Swoo_1471 1847969 - 1848319 + | hypothetical protein Swoo_1472 1848720 - 1849037 + | hypothetical protein Swoo_1473 1849276 - 1849635 + | hypothetical protein Swoo_1474 1849700 - 1850020 + | hypothetical protein Swoo_1475 1850081 - 1850392 + | hypothetical protein Swoo_1476 1850423 - 1850740 + | hypothetical protein Swoo_1477 1850766 - 1851125 + | hypothetical protein Swoo_1478 1851195 - 1851539 + | hypothetical protein Swoo_1479 1851598 - 1851969 + | hypothetical protein TERM 1802 1853034 - 1853048 + G 78 -8.6 -4.09685 | opp_overlap 1853029 ACGGCAAAATTCGCG CAGCAA CCA TTGCTG TTTTAAGCCCTAAGA Swoo_1480 1852232 - 1854910 + | hypothetical protein TERM 1803 1855318 - 1855304 - g 71 -4.2 -4.83615 | opp_overlap 1855304 1855291, overlap 1855306 TATCGGTTAGAAAAA CGGATC GGT GATCAG TTTGTTCAAGCTCGA TERM 1804 1855866 - 1855854 - g 79 -4.8 -5.04987 | AATACCTTCAAAAAA CGGT CGTAC ACCG TTACGCCACGCGTTA TERM 1805 1858053 - 1858035 - g 100 -7.5 -5.67063 | opp_overlap 1858038 GTTATGATAAAAAAA TCACTGA TGTGC TCAGTGA TATGCACCAAAGTGA Swoo_1481 1854929 - 1858756 + | hypothetical protein Swoo_1482 1858756 - 1859511 + | hypothetical protein Swoo_1483 1859558 - 1860031 + | hypothetical protein TERM 1806 1860122 - 1860102 - T 83 -6.9 -4.92385 | opp_overlap 1860102 1860101 1860107, overlap 1860106 CAGAGCCAAATAAAA TAAAGGGGT CAG AGCCCTTTA GTTTTTAGCTCTTTA Swoo_1484 1860840 - 1860145 - | hypothetical protein Swoo_1485 1861016 - 1861363 + | hypothetical protein Swoo_1486 1861391 - 1861708 + | hypothetical protein Swoo_1487 1861743 - 1862111 + | hypothetical protein Swoo_1488 1862134 - 1862478 + | hypothetical protein TERM 1807 1862599 - 1862627 + G 70 -8.9 -3.23216 | opp_overlap 1862599 TATATATGTCAATAA TGGTTGGACTATG GTT CATGTTCCAGCCA TTACTAATAATCCAG Swoo_1489 1862483 - 1862821 + | hypothetical protein Swoo_1490 1862948 - 1863322 + | hypothetical protein Swoo_1491 1863344 - 1863667 + | hypothetical protein Swoo_1492 1863678 - 1864031 + | hypothetical protein Swoo_1493 1864034 - 1864699 + | hypothetical protein Swoo_1494 1864696 - 1865028 + | hypothetical protein Swoo_1495 1866063 - 1865395 - | anti-ECFsigma factor, ChrR Swoo_1496 1866884 - 1866117 - | short-chain dehydrogenase/reductase SDR Swoo_1497 1867024 - 1867377 + | HxlR family transcriptional regulator Swoo_1498 1868319 - 1867396 - | permease TERM 1808 1868142 - 1868132 - G 74 -3.2 -5.09225 | ATCGCACCTAAAAAA CCTG CAA CAAG ATAACCTTTGCCATT TERM 1809 1868575 - 1868557 - g 75 -8.8 -3.82097 | opp_overlap 1868555 1868559 GCTAAAGCGATGAAA GAGTTGGG GCA CCCGACTC GCTTGGCTATCTTTA Swoo_1499 1868509 - 1868820 + | ArsR family transcriptional regulator TERM 1810 1868873 - 1868855 - T 83 -10.3 -3.74747 | opp_overlap 1868855 TTAAGTGTGATGAAA GGGCCTA AGATA TAGGCCC TTTATTGTTAGTACT TERM 1811 1868855 - 1868873 + T 89 -10.3 -4.49316 | opp_overlap 1868855 TTAAGTGTGATGAAA GGGCCTA AGATA TAGGCCC TTTATTGTTAGTACT Swoo_1500 1872778 - 1868897 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 1812 1871609 - 1871638 + g 71 -7.9 -3.74792 | overlap 1871597 1871596 GTTTCCTCCACCACT GATGGAGAAGTTA ATAA TATCTACTCCATC TTTAACTGTATCGTC TERM 1813 1873045 - 1873079 + r 71 -8.2 -3.47941 | opp_overlap 1873046, overlap 1873046 1873048 1873048 AATAATTTTTTTATA ATATTTAATTGTAAAT TAA GTTTACAATTAAATAC TTGTAATAATTGGTC TERM 1814 1873046 - 1873078 + r 81 -11.7 -2.68282 | opp_overlap 1873046, overlap 1873045 1873048 1873048 ATAATTTTTTTATAA TATTTAATTGTAAAT TAA GTTTACAATTAAATA CTTGTAATAATTGGT TERM 1815 1873078 - 1873046 - R 82 -11 -3.30338 | opp_overlap 1873046 1873045 1873048 1873048 ATAATTTTTTTATAA TATTTAATTGTAAA TTAAG TTTACAATTAAATA CTTGTAATAATTGGT TERM 1816 1873048 - 1873076 + r 74 -9.9 -2.87957 | opp_overlap 1873046, overlap 1873048 1873046 1873045 AATTTTTTTATAATA TTTAATTGTAAAT TAA GTTTACAATTAAA TACTTGTAATAATTG Swoo_1501 1873883 - 1873311 - | hypothetical protein Swoo_1502 1874708 - 1873962 - | hypothetical protein Swoo_1503 1874844 - 1875413 + | MarR family transcriptional regulator TERM 1817 1875396 - 1875425 + T 100 -13.7 -3.65314 | opp_overlap 1875402, overlap 1875402 ATCTGTGTTGAACAT GAAAAACGCAGCC AATA GGCTGCGTTTTTA TTATTAAGCATTCAA TERM 1818 1875402 - 1875419 + T 100 -12.7 -5.29445 | opp_overlap 1875402, overlap 1875396 GTTGAACATGAAAAA CGCAGCC AATA GGCTGCG TTTTTATTATTAAGC TERM 1819 1875419 - 1875402 - T 100 -12.7 -4.87626 | opp_overlap 1875402 1875396 GTTGAACATGAAAAA CGCAGCC AATA GGCTGCG TTTTTATTATTAAGC Swoo_1504 1877685 - 1875448 - | hypothetical protein TERM 1820 1876058 - 1876080 + g 100 -14.2 -3.66178 | overlap 1876061 ATTACGTCACCTAGG CGAGCCGAGA GCA TCTCGGCTTG TTTGAGCTTACCGCC TERM 1821 1876061 - 1876077 + g 100 -12.3 -3.96618 | overlap 1876058 ACGTCACCTAGGCGA GCCGAGA GCA TCTCGGC TTGTTTGAGCTTACC Swoo_1505 1878009 - 1878344 + | hypothetical protein Swoo_1506 1878334 - 1878585 + | hypothetical protein TERM 1822 1879822 - 1879837 + G 80 -4.6 -5.27335 | overlap 1879823 1879834 CATGGGAGTGATTTT AGCCAC TGCT GTGGCG TTTTTATTTGAGCGC TERM 1823 1879823 - 1879836 + G 71 -8.1 -3.75678 | overlap 1879822 1879834 ATGGGAGTGATTTTA GCCAC TGCT GTGGC GTTTTTATTTGAGCG Swoo_1507 1878626 - 1880203 + | PepSY-associated TM helix domain-containing protein TERM 1824 1880238 - 1880256 + T 100 -14.6 -3.95986 | opp_overlap 1880238 ACAAATCAGTAAAAA GCGCGGAT TAA ATCCGCGC TTTCGTTCACTTGGG TERM 1825 1880256 - 1880238 - T 100 -14.6 -4.85267 | opp_overlap 1880238 ACAAATCAGTAAAAA GCGCGGAT TAA ATCCGCGC TTTCGTTCACTTGGG Swoo_1508 1880826 - 1880272 - | putative lipoprotein Swoo_1509 1882993 - 1880849 - | hypothetical protein TERM 1826 1882216 - 1882202 - G 77 -11.4 -2.54812 | opp_overlap 1882201 1882198, overlap 1882201 AGGTATATCAGCAAG GGCGCA GCG TGCGCC GTCGTTACTTGAAGA TERM 1827 1882702 - 1882714 + g 74 -7.7 -4.01045 | overlap 1882700 ATAGTGGATTAATTT GGTAG TCA CTACC TGTTTTTCCTAGTGT Swoo_1510 1883648 - 1883154 - | hypothetical protein TERM 1828 1883328 - 1883305 - G 76 -8.2 -4.28774 | TTATTCAATCTAAAA GCTTGAGCTA GTTC TAGCTCAACC TGAACGTTCTCTCCT TERM 1829 1883688 - 1883671 - R 93 -11.3 -5.00616 | TCTGCGGTTAAAAAA GGGCAGA AAGC TCTGCCC AAAGACAAGTAAACT Swoo_1511 1884796 - 1883714 - | peptidyl-Lys metalloendopeptidase TERM 1830 1884172 - 1884186 + g 79 -4.2 -5.31456 | opp_overlap 1884172 TTGCGGCATCTAAAC CTGCCA GAA TGTCAG TTTTTTGTGAGTTAC TERM 1831 1884765 - 1884781 + g 93 -2.9 -5.82172 | AGTGCTGCTGTGACA GCAATGG CGC TCAATGC TTTTTTTGTATTCAT TERM 1832 1885231 - 1885241 + G 70 -5.4 -4.33754 | AAAAAATATCACTCA CTCA GTT TGAG TTTTACCTTGTGGTT TERM 1833 1885484 - 1885503 + G 75 -10.8 -2.87211 | CTGGAGTAGTCTTGA GTGAGCAA CCAC TTGCTCAC TATGTCAAGAGCAGT TERM 1834 1889590 - 1889569 - g 77 -7.4 -4.323 | CTTAAAGAGTTAAAA GTTCGATT GGCTAA AATCGAAC TCAGCAGAGGGGAGG Swoo_1512 1885177 - 1889619 + | multi-sensor hybrid histidine kinase TERM 1835 1889709 - 1889695 - g 70 -2.8 -5.00616 | GCTGTCTGCAAAAAA CCTATA ACT TAAAGG TGGCAATGAATGGCA Swoo_1513 1889616 - 1890521 + | response regulator receiver modulated diguanylate cyclase Swoo_1514 1890612 - 1891760 + | response regulator receiver protein Swoo_1515 1892792 - 1891797 - | hypothetical protein Swoo_1516 1893401 - 1893823 + | OsmC family protein TERM 1836 1893888 - 1893910 + G 84 -7 -5.06414 | CGTTATTAACGAGTG GTAGAGTGTT ACT GGCGCTCTAC TTTTTGTTACCAGGG Swoo_1517 1893830 - 1894246 + | DoxX family protein TERM 1837 1894282 - 1894295 + T 100 -8.1 -5.71983 | opp_overlap 1894282 ACTAGAGTGTAAAAA CCACC ATTG GGTGG TTTTTTTGTGCTTGA TERM 1838 1894295 - 1894282 - T 86 -8.1 -4.65168 | opp_overlap 1894282 ACTAGAGTGTAAAAA CCACC ATTG GGTGG TTTTTTTGTGCTTGA Swoo_1518 1894877 - 1894317 - | CBS domain-containing protein TERM 1839 1895060 - 1895082 + H 71 -4.2 -4.84359 | opp_overlap 1895064, overlap 1895064 CAATTAATTTATGTA TAAACAATTG ATG CAGTTGTTAA TTTTTGTAACCATAA Swoo_1519 1895202 - 1895786 + | hypothetical protein TERM 1840 1895847 - 1895872 + T 100 -14.7 -3.90241 | opp_overlap 1895847 CGCAACCAATAAAAA GGCCCCAACAC TTTC GTGATGGGGCC TTCTTGTAATTGGTG TERM 1841 1895872 - 1895847 - T 100 -14.7 -5.1963 | opp_overlap 1895847 CGCAACCAATAAAAA GGCCCCAACAC TTTC GTGATGGGGCC TTCTTGTAATTGGTG Swoo_1520 1896843 - 1896349 - | SsrA-binding protein Swoo_1521 1897082 - 1897519 + | cyclase/dehydrase Swoo_1522 1897553 - 1897885 + | hypothetical protein TERM 1842 1897931 - 1897905 - T 100 -19.6 -4.95957 | opp_overlap 1897905 TAAATGAATTAAAAA GGGGCTAATTCC TAT GGAATTAGCCCC TTTTTATTAGATCTG TERM 1843 1897905 - 1897931 + T 100 -19.6 -5.12068 | opp_overlap 1897905 TAAATGAATTAAAAA GGGGCTAATTCC TAT GGAATTAGCCCC TTTTTATTAGATCTG Swoo_1523 1898460 - 1897957 - | SmpA/OmlA domain-containing protein TERM 1844 1898716 - 1898731 + H 77 -6.2 -4.82901 | opp_overlap 1898715 GTGTCAGCCAAAATG CCTATT TTTG AATAGG TTTTTGTAGGAGAAA Swoo_1524 1898977 - 1899834 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 1845 1900110 - 1900098 - g 81 -3.4 -5.37043 | ACTGGAGACAAAAAA GCTT ATAGA AAGC ACATTATGTCCCCAA Swoo_1525 1899924 - 1900136 + | hypothetical protein Swoo_1526 1900209 - 1902077 + | diguanylate cyclase Swoo_1527 1902176 - 1904104 + | diguanylate cyclase TERM 1846 1904175 - 1904194 + F 83 -8.6 -4.2558 | CCTCTGAAGGTATTA GCCACTTT TGAA AGAGTGGC TTTTCATCGAAACTA Swoo_1528 1904877 - 1906283 + | malate synthase TERM 1847 1906380 - 1906411 + F 75 -4.3 -5.04868 | overlap 1906381 AATTTCAGCGGTTGT TCCCGCGCGGTAT TCTTAC GTGCTGTGCGGGC TTTTCTTTCCTTTCA TERM 1848 1906381 - 1906410 + F 70 -7.8 -3.61294 | overlap 1906380 ATTTCAGCGGTTGTT CCCGCGCGGTAT TCTTAC GTGCTGTGCGGG CTTTTCTTTCCTTTC TERM 1849 1906465 - 1906483 + F 100 -10.3 -6.10295 | TGTTTGCTTGTGTTG GCGACTC CTCGT GAGTCGC TTTTTTTTATCTTAA TERM 1850 1907472 - 1907461 - g 75 -4.4 -4.90013 | TAAGGCAACGAAAAA GCTT GCTG AAGC CTATGGCGCTAAAGT Swoo_1529 1906598 - 1908082 + | putative signal transduction protein Swoo_1530 1908595 - 1908107 - | hypothetical protein Swoo_1531 1909499 - 1908660 - | hypothetical protein Swoo_1532 1911296 - 1909551 - | diguanylate cyclase Swoo_1533 1912729 - 1911293 - | extracellular solute-binding protein TERM 1851 1911397 - 1911408 + g 74 -5.8 -4.62471 | opp_overlap 1911397, overlap 1911395 CGTTACTGTTAGACA GCTG AAAG CAGC TTTTTGCCAGTTCCG TERM 1852 1912605 - 1912621 + g 89 -2.9 -5.62045 | CAAAATCCAGTTTCT GCGACTA AAG TGATCGC TTTTTTATTCTCTAT Swoo_1534 1913379 - 1912948 - | CopG family transcriptional regulator Swoo_1535 1914082 - 1913339 - | hypothetical protein Swoo_1536 1914531 - 1914755 + | hypothetical protein Swoo_1537 1914897 - 1915199 + | NrfJ-related protein TERM 1853 1915244 - 1915287 + F 82 -8.5 -4.24397 | gap 2, opp_overlap 1915250, overlap 1915250 TAGTTGAAAACTTGT TGAAAATGGTGGCTCGATAAC TCTG GTTATC--GCCACCATTTTTG TTTATCTTCCATTAT TERM 1854 1915281 - 1915250 - f 75 -7.5 -4.10855 | gap 2, opp_overlap 1915244 1915250 AAAACTTGTTGAAAA TGGTGGCTCGATAAC TCTG GTTATC--GCCACCA TTTTTGTTTATCTTC TERM 1855 1915250 - 1915281 + F 100 -7.5 -5.4659 | gap 2, opp_overlap 1915250, overlap 1915244 AAAACTTGTTGAAAA TGGTGGCTCGATAAC TCTG GTTATC--GCCACCA TTTTTGTTTATCTTC Swoo_1538 1915331 - 1915843 + | GCN5-related N-acetyltransferase Swoo_1539 1917623 - 1915890 - | metallophosphoesterase TERM 1856 1917755 - 1917738 - R 100 -9.9 -5.92399 | opp_overlap 1917738 TAAGAAAACAAAAAA GGGAAAC TCAA GTTTCCC TTTTAGCCTTGCGCT TERM 1857 1917738 - 1917755 + r 85 -9.9 -4.19506 | opp_overlap 1917738 TAAGAAAACAAAAAA GGGAAAC TCAA GTTTCCC TTTTAGCCTTGCGCT Swoo_1540 1918876 - 1917788 - | hypothetical protein TERM 1858 1919066 - 1919080 + H 74 -9.2 -3.136 | opp_overlap 1919065, overlap 1919064 TATCTCTGTATAATT CGCCGC CCT GTGGCG TGTATTAGGTGTTGA Swoo_1541 1919107 - 1920228 + | radical SAM protein Swoo_1542 1920262 - 1921050 + | type IV pilus biogenesis/stability protein PilW Swoo_1543 1921050 - 1922072 + | hypothetical protein TERM 1859 1922122 - 1922099 - f 100 -14 -3.72909 | TGAATCAAGATATAA TGATGCTGTG TTAA CACAGCATCA GCAAGTAACAGACAT Swoo_1544 1922152 - 1923267 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 1860 1923287 - 1923306 + F 91 -7.1 -5.31456 | opp_overlap 1923287 CGAGTTATTCACTAA CGCTGAG CTCTGT CTCGGCG TTTTTTGTGAGTTAA Swoo_1545 1923442 - 1924716 + | histidyl-tRNA synthetase Swoo_1546 1924729 - 1925349 + | tetratricopeptide TPR_4 TERM 1861 1926240 - 1926253 + G 73 -4.5 -4.86621 | overlap 1926233 ATGAGTTAGCCGATT CGGGT GTTA ACCTG TTTTTGGTTGACGAT Swoo_1547 1925360 - 1926547 + | outer membrane assembly lipoprotein YfgL TERM 1862 1926570 - 1926594 + F 100 -13.6 -5.33405 | opp_overlap 1926570 TTTAAACGATAATAA GCCCCTGGAA GCGTG TTCCGGGGGC TTTTTGTTTACTGAA TERM 1863 1926594 - 1926570 - f 90 -11.4 -3.93216 | opp_overlap 1926570 TTTAAACGATAATAA GCCCCTGGAA GCGTG TTCCGGGGGC TTTTTGTTTACTGAA Swoo_1548 1926665 - 1928131 + | small GTP-binding protein TERM 1864 1928151 - 1928188 + T 100 -15.1 -2.75877 | opp_overlap 1928160, overlap 1928160 TACTGTTCGTCTTAA GAGTAAAAAGGCCAGCT AATT AGCTGGCCTTTTTATTG GTATATTTTTATAAA TERM 1865 1928179 - 1928160 - T 100 -13.6 -4.87626 | opp_overlap 1928151 1928160 TCTTAAGAGTAAAAA GGCCAGCT AATT AGCTGGCC TTTTTATTGGTATAT TERM 1866 1928160 - 1928179 + T 100 -13.6 -5.17744 | opp_overlap 1928160, overlap 1928151 TCTTAAGAGTAAAAA GGCCAGCT AATT AGCTGGCC TTTTTATTGGTATAT Swoo_1549 1928974 - 1928207 - | methyltransferase type 11 Swoo_1550 1929243 - 1930010 + | hypothetical protein Swoo_1551 1930016 - 1930459 + | glutathione-dependent formaldehyde-activating GFA TERM 1867 1931511 - 1931496 - g 71 -4 -4.80417 | GAGAAAAAGAACAAA TTACAC AGAA GTGCAA TAGCTCTTGTAGTTT Swoo_1552 1931265 - 1932323 + | hypothetical protein TERM 1868 1933958 - 1933969 + G 76 -3 -5.28831 | TGAAATTTTTTATAT CAAT AATT ATTG TTTTATTTTCTTCGT TERM 1869 1934611 - 1934585 - g 91 -7.4 -5.26316 | CTACGCGAGAAAAAA TAAGCTCAGCTT TTA AATCTAAGCTTA CGCTTTTTCTCGGTG Swoo_1555 1933942 - 1934853 + | hypothetical protein Swoo_1556 1935179 - 1936168 + | hypothetical protein Swoo_1557 1936416 - 1936817 + | hypothetical protein TERM 1870 1936861 - 1936873 + T 75 -7.7 -4.08692 | CGTTTAAACTTGGCA TACGC TTC GCGTA TTTTACGCCAAGTTC Swoo_1558 1938772 - 1937444 - | exodeoxyribonuclease VII, large subunit Swoo_1559 1938893 - 1940365 + | inosine-5'-monophosphate dehydrogenase TERM 1871 1940381 - 1940406 + F 74 -9.7 -2.83191 | gap 1, overlap 1940380 CTGATTGATGTGTGA TTGC-GGCGGGC TCT GCCCGTCTGCGA CTTCTGTGTTATGCC Swoo_1560 1940476 - 1942053 + | GMP synthase, large subunit TERM 1872 1942092 - 1942118 + F 100 -17.4 -6.04419 | opp_overlap 1942092 TAGTTATTTAATCAA GGGCCAGCGTAT TTG ATACGTTGGCCC TTTTTTTGTTCTTTT TERM 1873 1942118 - 1942092 - f 100 -15.2 -3.3782 | opp_overlap 1942092 TAGTTATTTAATCAA GGGCCAGCGTAT TTG ATACGTTGGCCC TTTTTTTGTTCTTTT Swoo_1561 1942215 - 1944146 + | acyltransferase 3 Swoo_1562 1944349 - 1944858 + | CMP/dCMP deaminase zinc-binding Swoo_1563 1946787 - 1945345 - | lytic transglycosylase catalytic TERM 1874 1947113 - 1947151 + H 100 -13.4 -3.727 | opp_overlap 1947112 1947110 1947113 TTTGTCAGAAAACAC TGTTTTCGACAAAATACT AGG AGTGATTTGTCGGAAACA TTTCCCTATAATAGC TERM 1875 1950687 - 1950697 + G 70 -6.8 -4.08064 | overlap 1950673 1950693 AGATTTGTGCGTAAC CGCT CAG AGCG TTTTGAAGCGCGCTT Swoo_1564 1947213 - 1951094 + | phosphoribosylformylglycinamidine synthase TERM 1876 1951269 - 1951247 - f 74 -6.2 -4.67692 | opp_overlap 1951247, overlap 1951249 CTAAAAGTAAATAAA GGGCTTCGAA TTT TTCGAGGCTC TTTTTTTTTGCTTTG TERM 1877 1951247 - 1951269 + F 100 -10.6 -6.28631 | opp_overlap 1951247 1951249 CTAAAAGTAAATAAA GGGCTTCGAA TTT TTCGAGGCTC TTTTTTTTTGCTTTG TERM 1878 1951351 - 1951329 - f 73 -4.3 -4.96848 | gap 1, opp_overlap 1951334, overlap 1951334 TGTGTTATATAAAAA TTAAAGCATC AGTA GATGCT-TAA TCATTGATATATGAA TERM 1879 1951347 - 1951334 - f 75 -6.7 -4.40526 | opp_overlap 1951334, overlap 1951329 TATATAAAAATTAAA GCATC AGTA GATGC TTAATCATTGATATA TERM 1880 1951531 - 1951490 - f 85 -11.7 -3.69483 | gap 1, opp_overlap 1951495 1951496, overlap 1951497 ACTTGATGTAAAATA GCAAAA-AGCCACCTAACTC AAA GAGAAAGGTGGCCGTTTTGC GCTAACAAAACTTCA TERM 1881 1951523 - 1951497 - f 93 -10.8 -4.98616 | opp_overlap 1951496 1951495, overlap 1951490 GTAAAATAGCAAAAA GCCACCTAACTC AAA GAGAAAGGTGGC CGTTTTGCGCTAACA TERM 1882 1951581 - 1951569 - f 74 -6.3 -4.57073 | opp_overlap 1951569 CAGGGTTGCTAAAAA GCTAT TTT ATAGC TCTCTTGCAGTATAA TERM 1883 1952895 - 1952911 + G 76 -10.9 -3.09987 | opp_overlap 1952892 CTTAGTCGCAAACGG CTGGATG CAA CATCCAG TTGGCTCAGTATTCA Swoo_1565 1952443 - 1953999 + | cytochrome bd ubiquinol oxidase subunit I Swoo_1566 1954015 - 1955154 + | cytochrome d ubiquinol oxidase, subunit II Swoo_1567 1955170 - 1955286 + | cyd operon protein YbgT TERM 1884 1955318 - 1955344 + T 100 -10.9 -5.61881 | gap 1, opp_overlap 1955318 TAAGTCGATAAAAAA GCCCCGC-CCTT GAGA AAGGTGTGGGGC TTTTTGTTTTTAAAG TERM 1885 1955344 - 1955318 - T 100 -8.7 -5.27923 | gap 1, opp_overlap 1955318 TAAGTCGATAAAAAA GCCCCGC-CCTT GAGA AAGGTGTGGGGC TTTTTGTTTTTAAAG TERM 1886 1955556 - 1955535 - T 100 -13.1 -5.28176 | opp_overlap 1955540 GTTATGCATAAAAAA GGCAACAGT GAAA ACTGTTGCC TTAAAAACTCACCGA Swoo_1568 1957590 - 1955587 - | methyl-accepting chemotaxis sensory transducer Swoo_1569 1960914 - 1957834 - | acriflavin resistance protein Swoo_1570 1962045 - 1960918 - | RND family efflux transporter MFP subunit TERM 1887 1961396 - 1961413 + g 72 -5.5 -4.45168 | AGTTTGACGGGGACG CCCACAA AGGC TTGAGGG TTTCTGTTTTGAACA TERM 1888 1961914 - 1961927 + g 70 -6.7 -4.06562 | CGATAACGTTAGGCT CTGTG TTGT CACAG TTTGTAATTGAGCTT TERM 1889 1962119 - 1962136 + H 79 -8.5 -4.07306 | opp_overlap 1962091 1962119, overlap 1962087 TCTATTTTGAAAGAA CTAGACT GTCC AGTCTAG TTTGTGATTAAATGT TERM 1890 1962136 - 1962119 - H 77 -8.5 -3.92542 | opp_overlap 1962087 1962119, overlap 1962091 TCTATTTTGAAAGAA CTAGACT GTCC AGTCTAG TTTGTGATTAAATGT Swoo_1571 1962193 - 1962816 + | TetR family transcriptional regulator Swoo_1572 1962898 - 1963815 + | hypothetical protein TERM 1891 1963820 - 1963842 + T 70 -7.1 -3.77136 | gap 1, opp_overlap 1963820 ATAGATTTTAACTGA GGGGCTA-AT CGTT ATCTAGCCCC TTTACGATTTCTTAT Swoo_1573 1964434 - 1963865 - | hypothetical protein Swoo_1574 1964968 - 1964489 - | hypothetical protein TERM 1892 1964600 - 1964585 - G 77 -3.2 -5.19212 | overlap 1964587 ACCATCATCAAAAAA CAGGAA ACAT TTCCAG TTACGCACAAACACA TERM 1893 1965091 - 1965075 - R 79 -5.8 -4.86731 | opp_overlap 1965075 1965080, overlap 1965070 TTGTTTGAAATAAAA GCCAGC GCTTA ACTGGC GTTTATCGAGTCTCT Swoo_1575 1967636 - 1965135 - | hypothetical protein TERM 1894 1965331 - 1965341 + g 70 -6.8 -4.09685 | opp_overlap 1965331 1965330 1965321 ATAGACTCTTCAAAC CTGC CTA GCAG TTTTAAAACGTGAGC Swoo_1576 1968296 - 1967757 - | hexapaptide repeat-containing transferase Swoo_1577 1969058 - 1968300 - | flagellin modification protein A Swoo_1578 1969750 - 1969052 - | N-acylneuraminate cytidylyltransferase Swoo_1579 1970727 - 1969747 - | oxidoreductase domain-containing protein TERM 1895 1970211 - 1970199 - G 70 -9.1 -3.17392 | opp_overlap 1970210 CATGGCTTAATTCAA GGAGG GCA CCTCC GCCAAGCGATCTGTT Swoo_1580 1971782 - 1970724 - | nucleotidyl transferase TERM 1896 1971326 - 1971344 + g 72 -6.7 -4.15854 | ACAGGGCTATCTCAA GTAGGGG TTTGT CTCCTAC TTTTAACATAGGTTT Swoo_1581 1972422 - 1971784 - | sialic acid biosynthesis protein NeuD Swoo_1582 1973494 - 1972415 - | N-acylneuraminate-9-phosphate synthase TERM 1897 1973293 - 1973305 + g 100 -4.1 -5.82172 | GGCTTAACATTGTAA GTTGA GAT TCGAC TTTTTTTGTGTTGCT Swoo_1583 1974168 - 1973491 - | LmbE family protein Swoo_1584 1975315 - 1974158 - | UDP-N-acetylglucosamine 2-epimerase Swoo_1585 1976145 - 1975315 - | hypothetical protein TERM 1898 1975648 - 1975676 + g 81 -12.7 -2.64794 | opp_overlap 1975644 ACTCGAATCTATGTG TTGATTTAGTTGT ATT ACAGCTAAATCAA TCATATCAGCTTGCA TERM 1899 1975830 - 1975818 - G 79 -9.1 -3.86346 | opp_overlap 1975806 CTATTTTTTTATAAA CTCGC TCA GCGAG TAGCTGAAAAAGTCT TERM 1900 1975909 - 1975891 - G 80 -6.7 -4.87665 | opp_overlap 1975891, overlap 1975893 TGTCATCGATAAAAA TCCGAGC ATAGA GCTCGAA CTGTTTTCAAGGTTC Swoo_1586 1977410 - 1976262 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 1901 1976665 - 1976689 + g 80 -9.3 -4.09374 | opp_overlap 1976664 1976665 1976666, overlap 1976651 1976666 TCATCATGATAAAAC TCGTAAGGGTG GGG CACCTTTGCGG TTGTTGTTATGTGTT TERM 1902 1976666 - 1976688 + g 76 -10.6 -3.03998 | opp_overlap 1976666 1976664 1976665, overlap 1976665 1976651 CATCATGATAAAACT CGTAAGGGTG GGG CACCTTTGCG GTTGTTGTTATGTGT TERM 1903 1976763 - 1976744 - G 70 -9.2 -3.1372 | opp_overlap 1976746 1976746 1976747, overlap 1976742 TATTCGTGAGCAACA CTCCACCG CCAC CGGTGGTG ATTATCTTATTGCCG TERM 1904 1976746 - 1976761 + g 73 -10.4 -2.99178 | opp_overlap 1976744 1976742, overlap 1976746 1976747 TTCGTGAGCAACACT CCACCG CCAC CGGTGG TGATTATCTTATTGC TERM 1905 1976747 - 1976763 + g 72 -10.1 -2.89509 | opp_overlap 1976744 1976742, overlap 1976746 1976746 TCGTGAGCAACACTC CACCGCC ACC GGTGGTG ATTATCTTATTGCCG Swoo_1587 1978654 - 1977440 - | polysaccharide biosynthesis protein CapD TERM 1906 1977963 - 1977980 + g 72 -8.5 -3.60627 | TTAATATCTGTCGGG GCAACAA TAGG TTGTTGC TTTAACATGCGCTGA TERM 1907 1978713 - 1978730 + r 71 -4.3 -4.72272 | opp_overlap 1978729 AACTAAAGTCTATCT TATTTTT TACT AAAAATA TTTTTAATACACCGA Swoo_1588 1980646 - 1979480 - | hypothetical protein TERM 1908 1980724 - 1980704 - R 76 -5.5 -4.99035 | CTATCGACATAAAAA TGACAGT AACAGCG ACTGTCA GCCATATGTTTATGG TERM 1909 1980872 - 1980842 - R 84 -11.2 -3.86822 | overlap 1980843 GAATGTTTTGATAAA TCGTGGTTATGGGC TTA GCCCATAACCATCA GGTTAGCGCGAGATG TERM 1910 1980872 - 1980843 - R 87 -12.3 -2.91772 | gap 1, overlap 1980842 AATGTTTTGATAAAT CG-TGGTTATGGGC TTA GCCCATAACCATCA GGTTAGCGCGAGATG TERM 1911 1980891 - 1980903 + r 72 -5.5 -4.64495 | overlap 1980879 TAGCGCGAGATGACT CTCCG TTC TGGAG TTATTTTTGTTGGAT Swoo_1589 1982676 - 1980904 - | GSCFA domain-containing protein TERM 1912 1981597 - 1981609 + g 79 -7.7 -4.43755 | opp_overlap 1981596 1981597, overlap 1981590 GCTGTCACCAAAAAG GGTGA GGT TCACC TTTTGAGTTTGTTGT TERM 1913 1983249 - 1983263 + H 70 -5 -4.62772 | TTATATTAGCTCTGT CGATTC ATT GAATTG TTTGTTTAATTTAAG TERM 1914 1983382 - 1983362 - g 74 -11.1 -2.58272 | opp_overlap 1983366, overlap 1983358 CACACTACCAAGTCA CCGCTTGCC GAC GGCAATCGG TTGCCGTCAACGTCG TERM 1915 1983615 - 1983630 + G 87 -5.4 -5.4505 | gap 1, overlap 1983618 1983618 GCGAGAATATTCGTG TCACCCC TCA GGGG-GA TTTTTTATTGACGCG TERM 1916 1983618 - 1983629 + G 70 -7.2 -3.86307 | overlap 1983615 1983618 AGAATATTCGTGTCA CCCC TCAG GGGG ATTTTTTATTGACGC Swoo_1590 1983287 - 1983913 + | hypothetical protein Swoo_1591 1983910 - 1984356 + | hypothetical protein TERM 1917 1984406 - 1984375 - T 73 -9.6 -2.93251 | opp_overlap 1984381, overlap 1984381 TTAAGAAGTAACAAG TAAGAAGTTGAGGA TTAT CCCTCAACTTTTTA ATGTCCTATTTCTAT TERM 1918 1984381 - 1984400 + T 84 -7.9 -4.83269 | opp_overlap 1984381 1984375 AGTAACAAGTAAGAA GTTGAGG ATTATC CCTCAAC TTTTTAATGTCCTAT TERM 1919 1984400 - 1984381 - T 79 -8.6 -3.90559 | opp_overlap 1984381, overlap 1984375 AGTAACAAGTAAGAA GTTGAGGA TTAT CCCTCAAC TTTTTAATGTCCTAT Swoo_1592 1985059 - 1984634 - | FlgN family protein Swoo_1593 1985394 - 1985065 - | anti-sigma-28 factor, FlgM Swoo_1594 1986183 - 1985476 - | flagella basal body P-ring formation protein FlgA TERM 1920 1985895 - 1985912 + g 73 -6.3 -4.43351 | opp_overlap 1985895 GCCAAGGGTAATCCA GTTGTGG GCTA TCACAAC TTATTTTTACCGTAT TERM 1921 1986675 - 1986703 + G 71 -4.7 -4.7373 | opp_overlap 1986688, overlap 1986677 GTTGTTTTATCATTA TTTCTGAATAC AACCGAA GTATTCAGGGA TTTTTGGTAAAGTCA Swoo_1595 1986395 - 1987318 + | response regulator receiver modulated CheW protein TERM 1922 1987850 - 1987837 - g 71 -2.3 -5.1244 | overlap 1987838 GTATCAACAGAAAAA GCCAG GAAC CTTGC CAGGTAATGCCTCAA TERM 1923 1988143 - 1988160 + G 71 -8.4 -3.53012 | overlap 1988141 AAAGGCCAAAATCCT GCGGCA ATTTGC TGCCGC TTTGAACCCGAAAGG Swoo_1596 1987442 - 1988275 + | MCP methyltransferase, CheR-type Swoo_1597 1988550 - 1988948 + | flagellar basal-body rod protein FlgB Swoo_1598 1988948 - 1989367 + | flagellar basal-body rod protein FlgC Swoo_1599 1989380 - 1990192 + | flagellar hook capping protein TERM 1924 1990267 - 1990240 - f 73 -6.4 -4.32951 | gap 1, opp_overlap 1990240, overlap 1990241 AGTTTAAGTAATAAA TTATCCAG-AACC TTA GGTTGCTGGATAC TCAGTTCAAACAATG TERM 1925 1990266 - 1990241 - f 76 -9.9 -3.19048 | gap 1, opp_overlap 1990240, overlap 1990240 GTTTAAGTAATAAAT TATCCAG-AACC TTA GGTTGCTGGATA CTCAGTTCAAACAAT TERM 1926 1991421 - 1991433 + G 70 -9.1 -3.19038 | overlap 1991426 TTCGACGGTTCCGTT GGCGA GAG TCGCC TTGGCTCGTTTTGCC Swoo_1600 1990336 - 1991697 + | flagellar basal body FlaE domain-containing protein TERM 1927 1991736 - 1991709 - f 73 -7 -4.08394 | opp_overlap 1991711, overlap 1991711 ATAGTTTCCCTAAAA TAGAGGAGCG GCCTACAT CGCTCCTCTT ATCTTCTCTAAATCT TERM 1928 1991711 - 1991734 + F 83 -10.3 -3.80276 | opp_overlap 1991709 1991711 AGTTTCCCTAAAATA GAGGAGCGG CCTACA TCGCTCCTC TTATCTTCTCTAAAT TERM 1929 1991734 - 1991711 - f 78 -9.6 -3.63922 | opp_overlap 1991711, overlap 1991709 AGTTTCCCTAAAATA GAGGAGCG GCCTACAT CGCTCCTC TTATCTTCTCTAAAT Swoo_1601 1991882 - 1992625 + | flagellar basal-body rod protein FlgF TERM 1930 1993135 - 1993121 - g 82 -7.8 -4.57341 | opp_overlap 1993124 1993130 AAGTGTCGGTAAAAA CAGCCG GCA CAGCTG AGAGTCAGGTGGTTG Swoo_1602 1992637 - 1993425 + | flagellar basal-body rod protein FlgG Swoo_1603 1993436 - 1994125 + | flagellar L-ring protein Swoo_1604 1994136 - 1995227 + | flagellar P-ring protein TERM 1931 1995279 - 1995258 - f 84 -8.7 -4.48713 | opp_overlap 1995242 1995258 CCTATCAATAAGAAA GGCTTAGCT AAAC AGCTAGGCC TTTTTCAATTCAAAT TERM 1932 1995258 - 1995279 + F 91 -10.9 -4.74504 | opp_overlap 1995258, overlap 1995242 CCTATCAATAAGAAA GGCTTAGCT AAAC AGCTAGGCC TTTTTCAATTCAAAT Swoo_1605 1995405 - 1996415 + | flagellar rod assembly protein/muramidase FlgJ Swoo_1606 1996462 - 1998375 + | flagellar hook-associated protein FlgK Swoo_1607 1998387 - 1999577 + | flagellar hook-associated protein 3 Swoo_1608 1999657 - 2000478 + | flagellin domain-containing protein TERM 1933 2000497 - 2000526 + F 86 -10.1 -4.26589 | gap 1, opp_overlap 2000497 TGGTTATGCCAGAAA GCGACTCATGCACA TTT TGTGTG-GAGTCGC TTTTAGCTATCTGCT TERM 1934 2000781 - 2000767 - g 75 -5 -4.8543 | GAAGGCTCAGAAAAA CCTGAA TAA TTCAAG TGGTAATCTAGCTAC Swoo_1609 2000717 - 2001535 + | flagellin domain-containing protein TERM 1935 2001558 - 2001536 - f 83 -10.8 -3.45023 | opp_overlap 2001542 CTATCACTACTATAA TATCAACTAA AGG TTAGTTGATA GATGATATAGTTGAA TERM 1936 2001575 - 2001598 + F 90 -11 -4.36596 | opp_overlap 2001575 ATGATATAGTTGAAA GGGAGGTTCG GTCA CGGATCTCCC TTTGTTGGTTCTAAG TERM 1937 2001804 - 2001794 - g 78 -5.4 -4.89966 | AGACTGAAAAAGAAA CTGA AGT TCAG TCAAAAACCAGTCAA Swoo_1610 2001649 - 2002038 + | flagellar protein FlaG protein TERM 1938 2002551 - 2002539 - g 74 -7.7 -4.1413 | overlap 2002531 AAGATATTGCTAAAA GCATC AAT GATGC CACAGATAATGTTGG Swoo_1611 2002088 - 2003458 + | flagellar hook-associated 2 domain-containing protein Swoo_1612 2003484 - 2003810 + | hypothetical protein Swoo_1613 2003821 - 2004231 + | flagellar protein FliS TERM 1939 2004253 - 2004274 + F 100 -14.5 -3.34895 | overlap 2004256 CTGCGTGTATATCTT CAAGGGGCT AATC AGCCCCTTG TTCATTCCAAATAAA TERM 1940 2004256 - 2004271 + F 83 -10.4 -3.81414 | overlap 2004253 CGTGTATATCTTCAA GGGGCT AATC AGCCCC TTGTTCATTCCAAAT Swoo_1614 2004543 - 2005976 + | sigma-54 dependent trancsriptional regulator TERM 1941 2006659 - 2006638 - g 84 -9.5 -4.18018 | gap 1 CTGCTTTAGGTAAAA TGGTG-GCCA CTT TGGCTCACCA AGTTAGAACGCCATT Swoo_1615 2006220 - 2007332 + | PAS/PAC sensor signal transduction histidine kinase TERM 1942 2007638 - 2007652 + G 78 -6.4 -4.67982 | overlap 2007614 ATTATTTAGCGAAGC CCTTTG CAC CAGAGG TTTTGTTGAATCAAG TERM 1943 2007705 - 2007691 - g 74 -7.2 -4.2803 | opp_overlap 2007690, overlap 2007703 TATCTCAAGCCAAAA TTGTGT CAA ACACAA CCTGTTGTTGCTGAT TERM 1944 2008296 - 2008280 - g 76 -10.9 -3.07816 | opp_overlap 2008285, overlap 2008285 TGCTTAGGCATGCAA CGACATC AGG GATGTCG GAGATCCCTGATTTT TERM 1945 2008285 - 2008307 + G 80 -9.2 -4.07568 | opp_overlap 2008280 2008285 AGGCATGCAACGACA TCAGGGATGT CGG AGATCCCTGA TTTTGAAGAGAGCGC Swoo_1616 2007325 - 2008683 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 1946 2008721 - 2008738 + F 93 -9.9 -4.97461 | opp_overlap 2008721 GCTATGTTTATAAAA GGCACTA ACTT TAGTGCC TTTTTAGTATTTATT TERM 1947 2008738 - 2008721 - f 89 -9.9 -4.38712 | opp_overlap 2008721 GCTATGTTTATAAAA GGCACTA ACTT TAGTGCC TTTTTAGTATTTATT Swoo_1617 2008902 - 2009234 + | flagellar hook-basal body complex subunit FliE Swoo_1618 2009326 - 2011032 + | flagellar M-ring protein FliF Swoo_1619 2011022 - 2012071 + | flagellar motor switch protein FliG Swoo_1620 2012071 - 2013045 + | flagellar assembly protein FliH Swoo_1621 2013123 - 2014463 + | flagellar protein export ATPase FliI Swoo_1622 2014501 - 2014947 + | flagellar export protein FliJ TERM 1948 2015022 - 2015042 + F 79 -9 -4.11692 | TATAGATATAGATCT TGTCGGCC TAGTC GGTCGACA TTTTGACGCTGACTG TERM 1949 2015465 - 2015482 + G 70 -9.1 -3.17212 | opp_overlap 2015462 2015461 2015465 CAGAGAGTAAAGCTA GCGGCGA TAGT TTGCCGC TTGATGAAATGCTCA Swoo_1623 2015101 - 2016735 + | flagellar hook-length control protein Swoo_1624 2016853 - 2017371 + | flagellar basal body-associated protein FliL Swoo_1625 2017518 - 2018546 + | flagellar motor switch protein FliM Swoo_1626 2018623 - 2019012 + | flagellar motor switch protein FliN Swoo_1627 2019023 - 2019397 + | flagellar biosynthesis protein FliO TERM 1950 2019829 - 2019808 - g 72 -8.1 -3.9642 | opp_overlap 2019804 2019810 AAAGAGCCAATTAAA GAGTTTATG TTGG CACAAACTC GTGTGACAGATCTGG Swoo_1628 2019394 - 2020140 + | flagellar biosynthetic protein FliP Swoo_1629 2020149 - 2020418 + | flagellar biosynthetic protein FliQ TERM 1951 2020419 - 2020435 + F 90 -2.2 -5.83822 | CAGGTGATTGGCTAA TGAGTG CCTGT CACGCA TTTTTTTTGAATATA Swoo_1630 2020507 - 2021292 + | flagellar biosynthetic protein FliR Swoo_1631 2021296 - 2022429 + | flagellar biosynthetic protein FlhB Swoo_1632 2022609 - 2024708 + | flagellar biosynthesis protein FlhA TERM 1952 2024965 - 2024937 - g 73 -5.3 -4.66537 | overlap 2024939 TGGCTGAAGAGAAAA TATCACTGGGCTT TAA AAGGCCAGTAAGA ACAGAAACTAAGGCA TERM 1953 2024963 - 2024939 - g 72 -7.9 -3.94773 | overlap 2024937 GCTGAAGAGAAAATA TCACTGGGCTT TAA AAGGCCAGTAA GAACAGAAACTAAGG TERM 1954 2025304 - 2025285 - g 71 -5 -4.46926 | gap 1, overlap 2025287 TATCTGAGCAGAAAA GCCGCACAA ACC CTGTG-GGC GCTATGTTAGAAAGT TERM 1955 2025646 - 2025636 - g 72 -6.8 -4.19746 | CCTATGGCAAAATAA TGGG GTG CCCA GTTAAGCAGGCTCAT Swoo_1633 2024720 - 2026123 + | GTP-binding signal recognition particle Swoo_1634 2026128 - 2027009 + | cobyrinic acid ac-diamide synthase Swoo_1635 2027002 - 2027730 + | RNA polymerase, sigma 28 subunit, FliA/WhiG Swoo_1636 2027760 - 2028143 + | response regulator receiver protein Swoo_1637 2028157 - 2028894 + | chemotaxis phosphatase, CheZ TERM 1956 2029681 - 2029663 - g 72 -8.8 -3.59247 | opp_overlap 2029664 GAACAAGCTGCTAAA GTGGAGGA AAC TCCGCCAC CTCCAGTTGATTCTG TERM 1957 2030796 - 2030815 + G 72 -8.6 -3.61398 | TAAAACAAATATTGT TGATGGTC AGTT GACCGTCA TTGTTAGGCAAAAAG Swoo_1638 2028910 - 2031111 + | CheA signal transduction histidine kinase Swoo_1639 2031136 - 2032254 + | response regulator receiver modulated CheB methylesterase Swoo_1640 2032247 - 2032867 + | hypothetical protein Swoo_1641 2032904 - 2033695 + | cobyrinic acid ac-diamide synthase TERM 1958 2034186 - 2034165 - g 71 -3.7 -4.77036 | CTTGATGAGCAAAAA CAAGCTGTA GAAA CAAAGCTTG AGACAAAAACGGGAG TERM 1959 2034228 - 2034261 + G 73 -9.1 -3.55946 | gap 1, opp_overlap 2034228 2034227, overlap 2034227 2034229 2034231 AAAGTAACAAAAGAT CTACTTGAAACTC-TC GAT GATGAGTTTCAAGTAC TATTCTTTAAAGTGG TERM 1960 2034229 - 2034260 + G 82 -12.6 -2.73085 | gap 1, opp_overlap 2034228 2034227, overlap 2034228 2034227 2034231 AAGTAACAAAAGATC TACTTGAAACTC-TC GAT GATGAGTTTCAAGTA CTATTCTTTAAAGTG TERM 1961 2034231 - 2034258 + G 75 -10.8 -2.90309 | gap 1, opp_overlap 2034228 2034227, overlap 2034229 2034228 2034227 GTAACAAAAGATCTA CTTGAAACTC-TC GAT GATGAGTTTCAAG TACTATTCTTTAAAG Swoo_1642 2033679 - 2034695 + | CheW protein Swoo_1643 2034703 - 2035188 + | CheW protein TERM 1962 2035209 - 2035233 + F 85 -10.1 -4.18303 | ACCTAATCCTGAGTG TTAGTCCCTAG CTA TTAGGGACTGA TTTCTCGTTTCTGCT TERM 1963 2035308 - 2035332 + G 70 -6.6 -4.07868 | gap 1, opp_overlap 2035314 GCTGCACTTGTGTGT GTAAT-AGCCT GTTT AGGCTTATTAC TTTATCTGCATATCC Swoo_1644 2035269 - 2035673 + | hypothetical protein Swoo_1645 2036271 - 2035957 - | FlhB domain-containing protein Swoo_1646 2038249 - 2036315 - | hypothetical protein TERM 1964 2037139 - 2037126 - G 72 -6.7 -4.26076 | opp_overlap 2037114 CCAGCTTTACCAAAA GCCTT ATTT AAGGC TGCTAGCATCAATGC TERM 1965 2037142 - 2037157 + g 72 -3.2 -4.93288 | CCTTATTTAAGGCTG CTAGCA TCAA TGCTTG TTTTGTTTGAGTGTT TERM 1966 2037755 - 2037766 + g 82 -7.2 -4.68103 | overlap 2037755 GTGTGCTGGAGGTAT GGGG TAGC CCCC TTTTCTTGAACTTAA Swoo_1647 2038488 - 2039336 + | VacJ family lipoprotein TERM 1967 2040154 - 2040142 - g 79 -7.7 -4.34402 | overlap 2040149 GCTTTTAGAGCAAAA TGCAG AAG CTGCA AAAAGTGTCCAGCAG Swoo_1648 2039684 - 2040787 + | response regulator receiver protein TERM 1968 2041166 - 2041199 + T 95 -14.1 -3.08508 | opp_overlap 2041171, overlap 2041171 CAGACCTACAAATAT AAAAACGCCTTACTA TTAC TAGTAAGGCGTTTTA TCATTTTAGAACCTA TERM 1969 2041171 - 2041194 + T 100 -14 -4.67635 | opp_overlap 2041171, overlap 2041166 CTACAAATATAAAAA CGCCTTACTA TTAC TAGTAAGGCG TTTTATCATTTTAGA TERM 1970 2041194 - 2041171 - T 100 -14 -5.24799 | opp_overlap 2041166 2041171 CTACAAATATAAAAA CGCCTTACTA TTAC TAGTAAGGCG TTTTATCATTTTAGA Swoo_1649 2042741 - 2041269 - | amino acid/peptide transporter TERM 1971 2042286 - 2042269 - G 72 -5.5 -4.44819 | overlap 2042270 TAGAAGATAGTAAAA GCACCGT CACG ACGGTGG TCGCCCTCTTCATAA TERM 1972 2042285 - 2042270 - G 70 -9 -3.25807 | overlap 2042269 AGAAGATAGTAAAAG CACCGT CACG ACGGTG GTCGCCCTCTTCATA TERM 1973 2042638 - 2042624 - G 76 -6.4 -4.50627 | TATCTACCAAATAAA GTACCA AAA TGGCAC GCATTGCGTAATAGC TERM 1974 2043479 - 2043492 + H 79 -8.1 -4.04174 | opp_overlap 2043473 CAACATGAAGCCGCT TGCGG CGTT CCGCA TTTGATTGTGTAGAA Swoo_1650 2043917 - 2044456 + | transcriptional acivator RfaH TERM 1975 2045186 - 2045205 + F 74 -9.4 -3.09516 | opp_overlap 2045185 2045190, overlap 2045190 GTGTCCGAAGGACAT CGAATGAA AAGT TTCATTCG TTAAGTGATAGCCGA TERM 1976 2045977 - 2046000 + F 73 -3.9 -5.11937 | gap 1, opp_overlap 2045971, overlap 2045981 ACGAAGTTACGTGCC GTGA-GGACG AAGTC CGTTCATCAC TTTTTTAACCTTATT TERM 1977 2046992 - 2046980 - g 74 -3.3 -5.1101 | CTATGAGTTAAAAAA CCGTG AAA CACTG GCTGATGTTTTATCC Swoo_1651 2046048 - 2048795 + | polysaccharide export protein Swoo_1652 2048999 - 2049376 + | S23 ribosomal protein Swoo_1653 2049473 - 2050438 + | lipopolysaccharide biosynthesis protein TERM 1978 2050822 - 2050812 - g 71 -4 -4.78764 | TAAAGGCAGTAAAAA TGAT TGT ATCA CTAGACAATGTGAAA TERM 1979 2052031 - 2052009 - g 70 -2.9 -5.00616 | gap 1, opp_overlap 2052001 TGGGTGCTGAAAAAA TTCATGTTTT AGGT AAAAC-TGAA CACGTATTATACGAT Swoo_1654 2050811 - 2052091 + | nucleotide sugar dehydrogenase Swoo_1655 2052218 - 2053246 + | NAD-dependent epimerase/dehydratase TERM 1980 2054120 - 2054131 + G 73 -4.4 -4.87803 | opp_overlap 2054120 AGAGGCTCCAAGAAT CTGA TTTT TCAG TTTTCTTTAGGGATG Swoo_1656 2053243 - 2054418 + | glycosyl transferase group 1 Swoo_1657 2054529 - 2054966 + | hypothetical protein Swoo_1658 2054980 - 2056272 + | hypothetical protein TERM 1981 2056379 - 2056402 + G 74 -3.1 -5.10461 | ATAACATATAGTTTT GGTGTGAGT AAAGAA ACTGACGCC TTTTTCTTAGCTACG TERM 1982 2056529 - 2056505 - g 74 -5.7 -4.66537 | opp_overlap 2056503 2056501 2056505 2056506, overlap 2056506 GTTTTGAATAGAAAA TCGAGTGCAAT CGA ATTGTACTCGC TCTATTTAATGTATT TERM 1983 2056506 - 2056528 + G 77 -11.4 -2.59361 | opp_overlap 2056506 2056505, overlap 2056505 2056503 2056501 TTTTGAATAGAAAAT CGAGTGCAAT CGA ATTGTACTCG CTCTATTTAATGTAT TERM 1984 2056528 - 2056506 - g 71 -9.2 -3.3944 | opp_overlap 2056505 2056503 2056501 2056506, overlap 2056505 TTTTGAATAGAAAAT CGAGTGCAAT CGA ATTGTACTCG CTCTATTTAATGTAT Swoo_1659 2056295 - 2057734 + | virulence factor MVIN family protein Swoo_1660 2057734 - 2058786 + | polysaccharide biosynthesis protein CapD TERM 1985 2059532 - 2059512 - g 72 -3.3 -4.89233 | GAGCAATACCAAAAA CAAATCACT ATT ACTGATTCG CAAGAGTTAGTGATA Swoo_1661 2058789 - 2059661 + | dTDP-4-dehydrorhamnose reductase Swoo_1662 2059658 - 2060788 + | UDP-N-acetylglucosamine 2-epimerase Swoo_1663 2060850 - 2061989 + | glycosyl transferase group 1 Swoo_1664 2061970 - 2062569 + | undecaprenyl-phosphate galactose phosphotransferase TERM 1986 2062621 - 2062638 + G 72 -5.7 -4.52589 | TCGAGAATTGTACTC TTATTTG GCGA CAAATAA TTTTATCTACGAAGG Swoo_1665 2062562 - 2063200 + | hexapaptide repeat-containing transferase Swoo_1666 2063208 - 2063423 + | phosphopantetheine-binding TERM 1987 2063434 - 2063447 + F 86 -9.5 -4.49389 | TTTAATTATTTACCA CGCCC GTAA GGGCG TTTTGGTTGTAGAAT TERM 1988 2064144 - 2064162 + G 78 -6.1 -4.60924 | TACTCTTAAGCGGGT TCCATTA TTAGT TAATGGA TTTTTAGAGGCTTTA Swoo_1667 2063461 - 2064474 + | Beta-ketoacyl-acyl-carrier-protein synthase I TERM 1989 2065070 - 2065058 - g 71 -7.7 -3.75933 | ATAGAGTTTAGTAAA CAGCT TAC AGCTG AGCAACGTGAAAACA Swoo_1668 2064464 - 2065219 + | short-chain dehydrogenase/reductase SDR Swoo_1669 2065229 - 2066242 + | Beta-ketoacyl-acyl-carrier-protein synthase I Swoo_1670 2066249 - 2067424 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 1990 2067490 - 2067526 + T 100 -13.3 -4.52803 | AGTAAATACAGGTTT TAAGGCTCTATTCAT ACTAATA ATGAATAGAGCCTTG TTTTATACATTTCTA Swoo_1672 2069097 - 2067947 - | transposase IS3/IS911 family protein TERM 1991 2068694 - 2068717 + g 81 -9.6 -3.90744 | AAGTAGTCGTTTGTC CTCTATAGCC CTAG GGCTATGGGG TTCTTTCAACCAAGA TERM 1992 2070289 - 2070299 + G 76 -4 -5.13137 | GCATAGTGCTAGCTG GAAT TTT ATTC TTTTTGGTTTGTTTC TERM 1993 2070384 - 2070406 + G 73 -2.6 -5.08088 | opp_overlap 2070368, overlap 2070374 TCGAAGGCAGTTTTG CCTTCTCAAG TAT CTTTGGTAGG TTTTTCTTAGCCATT Swoo_1673 2069513 - 2070745 + | membrane bound O-acyl transferase MBOAT family protein Swoo_1674 2070756 - 2071793 + | hypothetical protein TERM 1994 2071860 - 2071909 + T 70 -8.6 -3.12788 | opp_overlap 2071864 2071867 2071876, overlap 2071857 2071876 TTACGGTAAGATATA AGAACAGTGCCCAAAAGCGTTC ATTCAA GAACGCTTTTGGGCATGAATCA TCGTTGTTTATTCTG TERM 1995 2071904 - 2071864 - T 100 -17.9 -3.97043 | gap 1, opp_overlap 2071860 2071857 2071876, overlap 2071867 2071876 GGTAAGATATAAGAA CAGTGCCCAAAAGCGTTC ATTCAA GAACGCTTTTGGGCA-TG AATCATCGTTGTTTA TERM 1996 2071902 - 2071867 - T 100 -20.7 -2.72916 | opp_overlap 2071860 2071857 2071876, overlap 2071864 2071876 AAGATATAAGAACAG TGCCCAAAAGCGTTC ATTCAA GAACGCTTTTGGGCA TGAATCATCGTTGTT TERM 1997 2071893 - 2071876 - T 73 -7 -4.11371 | opp_overlap 2071860 2071857 2071876, overlap 2071867 2071864 GAACAGTGCCCAAAA GCGTTC ATTCAA GAACGC TTTTGGGCATGAATC TERM 1998 2071876 - 2071893 + T 73 -7 -4.11692 | opp_overlap 2071876 2071867 2071864, overlap 2071860 2071857 GAACAGTGCCCAAAA GCGTTC ATTCAA GAACGC TTTTGGGCATGAATC Swoo_1675 2073214 - 2071907 - | hypothetical protein Swoo_1676 2073750 - 2073268 - | hypothetical protein TERM 1999 2075630 - 2075646 + G 71 -8.7 -3.50481 | ATGACTGCTGGTGAG CTTGCTC CAG GAGCGAG TTGTACATTTGATTT TERM 2000 2078731 - 2078713 - g 71 -10.4 -2.76322 | overlap 2078710 2078715 TGACCCAACATATCA CATTAGCT TTG AGCTAATG AGTGGACCTGAGTGG Swoo_1677 2074124 - 2080825 + | hypothetical protein TERM 2001 2080866 - 2080827 - f 80 -10.2 -3.68619 | gap 1, opp_overlap 2080834, overlap 2080831 2080834 GTCAATTTAGTTAAA GT-AAGTAGCCGACATTAC TTG GTAATGTCGGCTTTTTGAC TTTATAGGGATTGAT TERM 2002 2080861 - 2080831 - f 83 -11.2 -3.54676 | opp_overlap 2080834, overlap 2080827 2080834 ATTTAGTTAAAGTAA GTAGCCGACATTAC TTG GTAATGTCGGCTTT TTGACTTTATAGGGA TERM 2003 2080858 - 2080834 - f 100 -17.3 -2.90283 | opp_overlap 2080834, overlap 2080831 2080827 TAGTTAAAGTAAGTA GCCGACATTAC TTG GTAATGTCGGC TTTTTGACTTTATAG TERM 2004 2080834 - 2080858 + F 100 -17.3 -4.84529 | opp_overlap 2080834 2080831 2080827 TAGTTAAAGTAAGTA GCCGACATTAC TTG GTAATGTCGGC TTTTTGACTTTATAG TERM 2005 2081042 - 2081026 - f 76 -8.7 -3.73299 | overlap 2081024 AATAAAAGAATAATA TGCCGAC AAT ATCGGCA AGGGAGAGAATAATG TERM 2006 2081354 - 2081344 - g 78 -5.4 -4.96848 | CTCGCTATATAAAAA CTGA GTT TCAG AAAAGACTTGTGAGA Swoo_1678 2081055 - 2084255 + | ASPIC/UnbV domain-containing protein TERM 2007 2086554 - 2086530 - g 100 -13.7 -3.98484 | AAGTGAAGGGAGAAA GCTTCAAGGTA AAT TACCCTGAAGC AACCCATAAAAAGCT Swoo_1679 2084447 - 2086729 + | hypothetical protein TERM 2008 2086711 - 2086735 + F 73 -3.7 -5.13741 | TTTACTGCCTGAGGA TATTTTCTTTT TTC AATAGGAAATA TTTTTATTGCATTAG TERM 2009 2088415 - 2088403 - g 73 -6.3 -4.36914 | opp_overlap 2088390 CCTCTGTTTAGAAAA CAGAT TGC ATCTG GCGGGCCTGTTACCG Swoo_1680 2087011 - 2088939 + | polysaccharide biosynthesis protein CapD TERM 2010 2088963 - 2089001 + F 73 -2.5 -5.27938 | gap 1, opp_overlap 2088968, overlap 2088968 CTCTATTCAAATACT C-TAAACGGTTCCCTTTT ATTT ATAAGGGAGCTGTTTCTG TTTTTATTTAAGAAT TERM 2011 2088968 - 2088995 + F 79 -7 -4.66456 | opp_overlap 2088968, overlap 2088963 TTCAAATACTCTAAA CGGTTCCCTTTT ATTT ATAAGGGAGCTG TTTCTGTTTTTATTT TERM 2012 2089195 - 2089211 + F 75 -6.5 -4.45771 | opp_overlap 2089198, overlap 2089198 TACAGGGGAGATAGA GAAGGAC TGG GTCCTGC TTTGTATTTTACCGT Swoo_1681 2089556 - 2090434 + | glucose-1-phosphate thymidylyltransferase TERM 2013 2090494 - 2090504 + G 72 -6.8 -4.28018 | CAAGTATTTACTGAT GAGC GAG GCTC TTTTCATGAAATCTT Swoo_1682 2090431 - 2090979 + | dTDP-4-dehydrorhamnose 3,5-epimerase Swoo_1683 2091171 - 2092262 + | dTDP-glucose 4,6-dehydratase Swoo_1684 2092266 - 2093189 + | dTDP-4-dehydrorhamnose reductase Swoo_1685 2093726 - 2093277 - | hypothetical protein Swoo_1686 2094289 - 2095194 + | sulfate adenylyltransferase, small subunit TERM 2014 2095235 - 2095222 - f 71 -8.1 -3.41761 | ATTTTAAAAGTAAGA CTGGC TTGC GCCAG AAAAGGCATTCTTGT Swoo_1687 2095352 - 2096761 + | sulfate adenylyltransferase, large subunit Swoo_1688 2096849 - 2098576 + | TrkA domain-containing protein Swoo_1689 2098645 - 2099313 + | adenylyl-sulfate kinase TERM 2015 2100236 - 2100222 - g 82 -12.8 -2.74192 | opp_overlap 2100231, overlap 2100219 CAGTTTGCAACAGGA GGCGGC CGC GCCGCC GCTGCGGGTATTAAT Swoo_1690 2099343 - 2100311 + | acetyltransferase TERM 2016 2100342 - 2100356 + T 72 -8.6 -3.29511 | opp_overlap 2100339, overlap 2100339 GCTAAAAATAAGGGC GATGAC TTC GTCATC TTCTAGGGCAGTCGC TERM 2017 2100779 - 2100789 + T 73 -4.6 -4.89477 | overlap 2100774 2100768 CATCCGTAGCCGCTT GCGG CGT TCGC TTTTATTATTAGCAC TERM 2018 2100822 - 2100836 + T 72 -5.6 -4.61199 | opp_overlap 2100821, overlap 2100823 CGCCCTAGAATCTAG CTGGGC GTA GCCCAC TTTTCTCTGTCCCCT TERM 2019 2100823 - 2100835 + T 72 -9.1 -3.35996 | opp_overlap 2100821, overlap 2100822 GCCCTAGAATCTAGC TGGGC GTA GCCCA CTTTTCTCTGTCCCC Swoo_1691 2102109 - 2100811 - | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Swoo_1692 2102597 - 2102196 - | glycerol-3-phosphate cytidylyltransferase Swoo_1693 2104075 - 2102630 - | nucleotidyl transferase Swoo_1694 2106210 - 2104132 - | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TERM 2020 2105451 - 2105439 - G 74 -5.5 -4.7254 | overlap 2105440 AGCCGTCAGCAAAAA CCCTG TCA CAGGA GGTCTGTAGGCAGTC TERM 2021 2105562 - 2105577 + g 79 -2.6 -5.36965 | gap 1, opp_overlap 2105534 2105562 TTGCTGTAGATGAAC CAGC-AT GAG ATAGCTG TTTTTTATGATGTTC TERM 2022 2106689 - 2106671 - R 73 -7.4 -4.18506 | opp_overlap 2106671, overlap 2106672 CTACTTTCAAAATAA GGTTCTAG GTT CTAGGACC TAGGACGCTTCGCTT Swoo_1695 2108018 - 2106975 - | glycosyl transferase family protein Swoo_1696 2109372 - 2108008 - | polysaccharide biosynthesis protein TERM 2023 2108890 - 2108909 + g 81 -6.4 -4.97158 | opp_overlap 2108890 2108889 GGTTTGCCATAAAAT TGCGCG GCCAACAA CGCGCA TTTTATTTGCTCTAA TERM 2024 2109544 - 2109568 + r 71 -3.7 -5.00138 | gap 1, opp_overlap 2109549, overlap 2109542 TTCATTAGCTGTGTT GCAAATTGCA ATCATC TGCAATT-GC TTTTTAGTTTAGCTC Swoo_1697 2110845 - 2109589 - | hypothetical protein Swoo_1698 2112271 - 2110865 - | hypothetical protein TERM 2025 2112204 - 2112217 + g 74 -6.7 -4.32034 | opp_overlap 2112204 2112202 CGACGAGCATTAACA GGAAG GCTG CTTCC TTTTACTGCTGCTCG Swoo_1699 2113553 - 2112291 - | polysaccharide export protein TERM 2026 2113350 - 2113366 + g 74 -5.8 -4.66318 | opp_overlap 2113350 TACCTCAGCGATATA CCCTCT CATGT AGGGGG TTTTATTACCGTAGT Swoo_1700 2113956 - 2113615 - | anti-sigma-factor antagonist TERM 2027 2113718 - 2113740 + g 81 -10.6 -3.45403 | opp_overlap 2113725, overlap 2113708 2113716 2113725 CTGACTCCTGCACTT GGAGAGAGCA GGA TGATCTCTCC TGCTTTTTTCTGAGT TERM 2028 2113725 - 2113743 + g 87 -6 -5.31456 | opp_overlap 2113725, overlap 2113708 2113718 2113716 CTGCACTTGGAGAGA GCAGGA TGATCTC TCCTGC TTTTTTCTGAGTTAA TERM 2029 2114361 - 2114332 - R 74 -9.3 -3.0782 | opp_overlap 2114331 TAACTCCTTAATAGA CTCAGTCTTAGGT GTGT ACCTGCGACTGAG CTCTGATACCTGACT Swoo_1701 2114708 - 2114316 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Swoo_1702 2116083 - 2114701 - | response regulator receiver modulated serine phosphatase Swoo_1703 2116451 - 2117371 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein Swoo_1704 2117371 - 2120877 + | multi-sensor hybrid histidine kinase Swoo_1705 2120969 - 2122477 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 2030 2122482 - 2122466 - f 76 -3.7 -5.19251 | overlap 2122467 GAAGAGCAACAAAAA GTAACCT CTT AGGTTAG CCCATAATCGCTTGT Swoo_1706 2122529 - 2123278 + | phosphotransferase domain-containing protein Swoo_1707 2124902 - 2123436 - | hypothetical protein Swoo_1708 2125291 - 2126181 + | ROK family protein TERM 2031 2126489 - 2126459 - g 83 -11.3 -3.36749 | opp_overlap 2126461 2126462, overlap 2126446 2126444 2126442 TAGTGTTAATAGTAA CACCATCCCTAAA GGGTG TTTAGTGATGGTG TTGGGCAGTGGCCAT Swoo_1709 2126235 - 2127029 + | hypothetical protein Swoo_1710 2127050 - 2127724 + | hypothetical protein Swoo_1711 2128186 - 2127779 - | hypothetical protein Swoo_1712 2129043 - 2128552 - | ferredoxin-type protein NapF Swoo_1713 2130130 - 2129114 - | UDP-glucose 4-epimerase Swoo_1714 2131050 - 2130133 - | UTP-glucose-1-phosphate uridylyltransferase TERM 2032 2130348 - 2130359 + g 72 -5.8 -4.57073 | overlap 2130344 2130343 GTATCTCATCACCGG CTCC TGCT GGAG TTTTTGCAAGCAGTG Swoo_1715 2131344 - 2132141 + | phenylalanine-4-hydroxylase Swoo_1716 2132180 - 2132518 + | transcriptional coactivator/pterin dehydratase TERM 2033 2133547 - 2133578 + G 75 -9.4 -3.48276 | opp_overlap 2133534 2133554, overlap 2133552 AACTGTGCAGCCTTG CCAGATAGCGCCGC TGAG GAGGAGCTATTTGG TTATGTGAGAAACGG Swoo_1717 2132752 - 2134290 + | transcriptional regulator, TyrR Swoo_1718 2134547 - 2135533 + | fumarylacetoacetate (FAA) hydrolase TERM 2034 2135555 - 2135575 + F 100 -11.9 -5.36441 | opp_overlap 2135555, overlap 2135574 ATGTTTTCTTTAAAA GGCCAATTC AAT GAGTTGGCC TTTTTTGTATCAAAA TERM 2035 2135575 - 2135555 - f 85 -9.7 -4.07687 | opp_overlap 2135555 2135574 ATGTTTTCTTTAAAA GGCCAATTC AAT GAGTTGGCC TTTTTTGTATCAAAA Swoo_1719 2135598 - 2136260 + | maleylacetoacetate isomerase TERM 2036 2136295 - 2136330 + T 91 -9.3 -5.00138 | gap 1, opp_overlap 2136297, overlap 2136297 TGAATCAAATCTGAA T-AGCTTCTCAATGAA CATGA TTCGTTGAGAAGCTTA TTTTTGATTTGGCTA TERM 2037 2136327 - 2136297 - T 87 -12 -3.13784 | opp_overlap 2136297 2136295 AATCAAATCTGAATA GCTTCTCAATGAAC ATG ATTCGTTGAGAAGC TTATTTTTGATTTGG TERM 2038 2136297 - 2136327 + T 100 -13.5 -4.58698 | opp_overlap 2136297, overlap 2136295 AATCAAATCTGAATA GCTTCTCAATGAA CATGA TTCGTTGAGAAGC TTATTTTTGATTTGG Swoo_1720 2137229 - 2136360 - | LysR family transcriptional regulator TERM 2039 2137163 - 2137185 + g 72 -8.4 -3.65542 | overlap 2137161 2137164 CCATGTTCAGGCTTT CGGCAGCTTT AGT GAAGCTGCCA TGTTTTACCAGTGAA TERM 2040 2137164 - 2137184 + g 79 -11.9 -2.79004 | overlap 2137163 2137161 CATGTTCAGGCTTTC GGCAGCTTT AGT GAAGCTGCC ATGTTTTACCAGTGA TERM 2041 2137239 - 2137253 + H 78 -7.2 -4.45723 | opp_overlap 2137238 2137239 ATCCATAACATTAAT CAATAG CTT CTATTG TTTTAATCTATTATT TERM 2042 2137608 - 2137620 + G 70 -9.1 -3.14982 | opp_overlap 2137606, overlap 2137607 TATCTGACAGAATTG GGCGT AGA ACGCC TCTGTTGATCAGTTT TERM 2043 2137815 - 2137778 - g 75 -8.3 -3.75169 | opp_overlap 2137785 2137812 GATGAGCTGAGTAAA GCTGCTATGTTGAAGGC TGGC GCCATCTACATTGCTGC CAATAGTTTAGGCGG TERM 2044 2138151 - 2138172 + G 74 -8 -4.13945 | AACTCCATTTGATGT CGTCTCCA TTTCAT TGGGGACG TTTTCAAGTGACGCT Swoo_1721 2137331 - 2138635 + | major facilitator transporter Swoo_1722 2139992 - 2138625 - | two component, sigma54 specific, Fis family transcriptional regulator Swoo_1723 2141815 - 2139989 - | histidine kinase TERM 2045 2140810 - 2140829 + g 78 -5.7 -4.92239 | opp_overlap 2140810 CTAACATGTCATTAA CCTGCTG TATTCT TAGCAGG TTTTTACGTTTTTCG TERM 2046 2141847 - 2141886 + r 84 -11.6 -3.30338 | opp_overlap 2141846 2141845 CAGTGAAAACATAGC GAGTCTAACCAGTAGGAT TACT ATACTATTGGTTAGACAC TTGTGAAACCCTTGT Swoo_1724 2143326 - 2141929 - | TRAP dicarboxylate transporter, DctM subunit Swoo_1725 2143955 - 2143323 - | tripartite ATP-independent periplasmic transporter DctQ TERM 2047 2143871 - 2143860 - G 77 -2.2 -5.33405 | GGTATTAAAGAAAAA GCGA GCGA TCAC TTCAACAAAAACCAG Swoo_1726 2145112 - 2144078 - | TRAP dicarboxylate transporter, DctP subunit TERM 2048 2144217 - 2144233 + g 87 -8.7 -4.46072 | ACTTCGGAACGCTTT GAGGCGA CAA TCGTCTC TTTATCTTTATTGAC TERM 2049 2144943 - 2144957 + g 79 -7.8 -4.36914 | overlap 2144945 AATTTGAGAGCCATC TGCCCC TTA GGGGTA TTTTCTGCCACGACA TERM 2050 2144945 - 2144955 + g 71 -8.2 -3.79419 | overlap 2144943 TTTGAGAGCCATCTG CCCC TTA GGGG TATTTTCTGCCACGA Swoo_1727 2145708 - 2145481 - | hypothetical protein Swoo_1728 2147351 - 2148760 + | glutamyl-tRNA synthetase TERM 2051 2151671 - 2151638 - T 91 -12.7 -3.18264 | opp_overlap 2151648, overlap 2151640 2151648 TCTTTGATTCAGTAA TATAAAAAAACCACC GAAA GGTGGTTTTTTTATG CCTGAATTTTACATA TERM 2052 2151669 - 2151640 - T 100 -15.3 -3.1552 | opp_overlap 2151648, overlap 2151638 2151648 TTTGATTCAGTAATA TAAAAAAACCACC GAAA GGTGGTTTTTTTA TGCCTGAATTTTACA TERM 2053 2151648 - 2151661 + T 100 -8.1 -5.64274 | opp_overlap 2151640 2151638 2151648 AGTAATATAAAAAAA CCACC GAAA GGTGG TTTTTTTATGCCTGA TERM 2054 2151661 - 2151648 - T 100 -8.1 -5.82172 | opp_overlap 2151648, overlap 2151640 2151638 AGTAATATAAAAAAA CCACC GAAA GGTGG TTTTTTTATGCCTGA Swoo_1729 2152747 - 2151872 - | LysR family transcriptional regulator TERM 2055 2152662 - 2152674 + g 73 -2.7 -5.09173 | GCCGATATGGAAGGT TGAGT TGT ATTCA TTTTTTCGGCTGTTA TERM 2056 2153263 - 2153223 - R 75 -10 -2.93858 | opp_overlap 2153226, overlap 2153226 CAGTACATTGATACA TAATCAGAACAATGAC GATTAAGCT GTCGTTGTTCTGATTA CCTTAACTGCCCTTA TERM 2057 2153226 - 2153260 + r 76 -10.2 -3.19192 | opp_overlap 2153223 2153226 TACATTGATACATAA TCAGAACAATGACG ATTAAGC TGTCGTTGTTCTGA TTACCTTAACTGCCC Swoo_1730 2154437 - 2153340 - | hypothetical protein Swoo_1731 2154918 - 2155727 + | hypothetical protein Swoo_1732 2155767 - 2156846 + | TRAP dicarboxylate transporter- DctP subunit Swoo_1733 2156885 - 2157067 + | hypothetical protein Swoo_1734 2157121 - 2157753 + | hypothetical protein TERM 2058 2158101 - 2158120 + G 81 -10.8 -3.53811 | opp_overlap 2158116, overlap 2158088 AGTGTTGCTACTGCC GCAACTGT AGGA ACAGTTGC TTTGCCACAAATAAA Swoo_1735 2157756 - 2159042 + | TRAP dicarboxylate transporter, DctM subunit Swoo_1736 2159159 - 2159887 + | LamB/YcsF family protein TERM 2059 2159926 - 2159903 - g 73 -6.2 -4.34402 | opp_overlap 2159903 GTGTGGATATTAAAA TAATAAATGA ATCT TCACTTATTA TCTATTTTGGAGATG Swoo_1737 2159890 - 2160570 + | allophanate hydrolase subunit 1 TERM 2060 2161116 - 2161135 + G 80 -6.4 -4.84359 | opp_overlap 2161128 GAGCTCGGGGTCATA CCATCGTA TCAA TTCGATGG TTTTTCTAAGCATCA Swoo_1738 2160567 - 2161487 + | urea amidolyase related protein Swoo_1739 2161638 - 2161889 + | sodium pump decarboxylase gamma subunit Swoo_1740 2161899 - 2163689 + | hypothetical protein Swoo_1741 2163698 - 2164828 + | sodium ion-translocating decarboxylase, beta subunit TERM 2061 2164929 - 2164977 + T 76 -10 -3.16881 | gap 2, overlap 2164930 TGTTATTGCTTGAGC TA-CTGCCAACTAGGGTA-TTTCA CTT TGAAAATACTGTAGTTGGCAGATA TTCATACCATGACTG TERM 2062 2164930 - 2164975 + T 78 -10.7 -3.14602 | gap 1, overlap 2164929 GTTATTGCTTGAGCT ACTGCCAACTAGGGTA-TTTCA CTT TGAAAATACTGTAGTTGGCAGA TATTCATACCATGAC Swoo_1742 2166846 - 2165017 - | ABC transporter related TERM 2063 2167626 - 2167612 - g 70 -7 -4.07568 | CCGCCCTGCGTAAAA GCCGCG GCT CGCGCC AAAGCGAATTGAGCC TERM 2064 2168480 - 2168512 + G 70 -5.5 -4.3208 | opp_overlap 2168485, overlap 2168485 2168489 CACGCAGCAATTAGA GCAAAGTATCTCTCC TTG GGGGAGTTACTTAAC TTTTCAATTATGGAA Swoo_1743 2167032 - 2168537 + | AraC family transcriptional regulator Swoo_1744 2168537 - 2169106 + | methylated-DNA--protein-cysteine methyltransferase Swoo_1745 2169258 - 2170556 + | DEAD/DEAH box helicase domain-containing protein TERM 2065 2171054 - 2171074 + G 72 -10.5 -2.95409 | opp_overlap 2171057, overlap 2171051 2171057 TGATTTAGCCGCGAT TAAGCAGGC TGA GCTTGCTTA TGCTTGTATTCCGTT Swoo_1746 2170905 - 2171375 + | dual specificity protein phosphatase TERM 2066 2172113 - 2172100 - g 74 -3.9 -4.89852 | GTACAGCGAGAAAAA CTTAA GCCC TTAAG GATACTGTTAGTCGA Swoo_1747 2171599 - 2172495 + | response regulator receiver modulated CheW protein TERM 2067 2172615 - 2172601 - f 73 -2.9 -5.33405 | CTGATTAAAGAAAAA TAACT TATTC AGTTA GCGTAATCGCCCCGC Swoo_1748 2172682 - 2173911 + | sodium:dicarboxylate symporter TERM 2068 2173962 - 2173937 - T 91 -9.1 -5.07486 | opp_overlap 2173937 TAGTGTGAATAAAAA TGCCTAGTACT GAAG AGTATTAGGCA TTTTTTTATCCCGTT TERM 2069 2173937 - 2173962 + T 100 -11.3 -5.63504 | opp_overlap 2173937 TAGTGTGAATAAAAA TGCCTAGTACT GAAG AGTATTAGGCA TTTTTTTATCCCGTT Swoo_1749 2175410 - 2174007 - | oxidoreductase domain-containing protein Swoo_1750 2175751 - 2176152 + | hypothetical protein Swoo_1751 2176862 - 2176203 - | pseudouridine synthase TERM 2070 2177475 - 2177486 + G 74 -5.8 -4.63218 | opp_overlap 2177475 CTATGTTCGTTATAA GCTC AATG GAGC TTTTGTTAACGAAAC TERM 2071 2178495 - 2178507 + G 71 -7.7 -3.73953 | AGTCCCTGAGCGCGG CACTG TGA CAGTG TTTGATAACGGTGAT Swoo_1752 2177122 - 2178882 + | arylsulfotransferase TERM 2072 2178899 - 2178935 + T 91 -10.4 -4.72986 | gap 1, opp_overlap 2178898 2178899 2178901 GTTTACCTTCAAAAT GATGTATGAC-TGGGCT AGAG AGCTTAGGTCATACATC TTTTTAATCGAGGTG Swoo_1753 2179541 - 2178939 - | hypothetical protein TERM 2073 2179102 - 2179118 + g 100 -12.3 -4.54253 | TTTGATACCCGTCTT GCCATCG ATT CGATGGC TTTATTTAATCCTTT Swoo_1754 2179705 - 2179863 + | hypothetical protein TERM 2074 2180094 - 2180082 - f 75 -7.7 -4.08216 | CTAGTTTGCCTAAAA CAGCT CTG AGCTG ACTACTTTCTTATAC Swoo_1755 2180201 - 2181238 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TERM 2075 2181261 - 2181282 + F 93 -5.1 -5.81412 | gap 1, opp_overlap 2181261 2181259 ATTTGGTTTAAAATA CCCACCCACT TAA AGCGG-TGGG TTTTTTTTAGCTCCC Swoo_1757 2182576 - 2182908 + | preprotein translocase, YajC subunit TERM 2076 2182952 - 2182987 + G 70 -7 -4.06491 | gap 1, overlap 2182955 ATATCCAATGTGGAA GAACCTGATGGTGATGA TTA TCATCGCAGT-AGGTTC TTTCTATGCGATTCC TERM 2077 2183112 - 2183087 - g 77 -9.9 -3.60627 | TCAGTCGACCGTAAA CGATATTCTTG CAAG CAAAAATATCG AGGTAAAACGTTCTG Swoo_1758 2182926 - 2184776 + | protein-export membrane protein SecD Swoo_1759 2184789 - 2185736 + | protein-export membrane protein SecF TERM 2078 2185954 - 2185969 + F 100 -10.4 -5.4251 | opp_overlap 2185954 AGTTAAGCGTGAAGA GCCACC TTTC GGTGGC TTTTTTATATCTGAG TERM 2079 2185969 - 2185954 - f 78 -10.4 -3.0644 | opp_overlap 2185954 AGTTAAGCGTGAAGA GCCACC TTTC GGTGGC TTTTTTATATCTGAG Swoo_1760 2186221 - 2186538 + | hypothetical protein TERM 2080 2186579 - 2186593 + G 79 -4.2 -5.22943 | TGGAGTTTTTCCTGT GCAGCA CAA TCCTGC TTTTTTAGCTTTGGT Swoo_1761 2186577 - 2186936 + | rhodanese domain-containing protein Swoo_1762 2186961 - 2187872 + | siroheme synthase TERM 2081 2187892 - 2187926 + F 90 -11.6 -4.11751 | overlap 2187893 ATTGTTGTTAGCTTT TTGATATTGGCTCTCA CAG TGAAGGCCAATATCAG TTTTCACCAATTCAT TERM 2082 2187893 - 2187925 + F 91 -12.9 -3.06569 | overlap 2187892 TTGTTGTTAGCTTTT TGATATTGGCTCTCA CAG TGAAGGCCAATATCA GTTTTCACCAATTCA TERM 2083 2188165 - 2188202 + G 70 -9.3 -3.17075 | gap 1 TTCACGAATGATGCT GCGT-TTACTTGCATTCG CCA TGAATGCCAGTGATACGC TTGAGTTCAGCAAGG Swoo_1763 2188040 - 2188579 + | YaeQ family protein TERM 2084 2188638 - 2188601 - T 100 -11.5 -5.17054 | opp_overlap 2188605 2188611, overlap 2188605 2188611 ACAATATTGAAAAAA TTAATAAAAAGCCAGTC GCAT GACTGGCTTTTTATTGG TGTGAGCTAATTAAA TERM 2085 2188605 - 2188634 + T 100 -16.7 -3.272 | opp_overlap 2188601 2188605 2188611, overlap 2188611 TATTGAAAAAATTAA TAAAAAGCCAGTC GCAT GACTGGCTTTTTA TTGGTGTGAGCTAAT TERM 2086 2188634 - 2188605 - T 100 -16.7 -3.94773 | opp_overlap 2188605 2188611, overlap 2188601 2188611 TATTGAAAAAATTAA TAAAAAGCCAGTC GCAT GACTGGCTTTTTA TTGGTGTGAGCTAAT TERM 2087 2188611 - 2188628 + T 93 -11.3 -5.16841 | opp_overlap 2188605 2188601 2188611, overlap 2188605 AAAAATTAATAAAAA GCCAGTC GCAT GACTGGC TTTTTATTGGTGTGA TERM 2088 2188628 - 2188611 - T 100 -11.3 -5.30199 | opp_overlap 2188611 2188605, overlap 2188605 2188601 AAAAATTAATAAAAA GCCAGTC GCAT GACTGGC TTTTTATTGGTGTGA Swoo_1764 2190092 - 2188656 - | carbon starvation protein CstA Swoo_1765 2190946 - 2190248 - | LytTR family two component transcriptional regulator Swoo_1766 2192631 - 2190955 - | signal transduction histidine kinase, LytS TERM 2089 2192389 - 2192377 - G 75 -4.7 -4.90013 | TAATCCAACTAAAAA GCCAG TGA CAGGC CCGCCAAGCAAACCG TERM 2090 2192416 - 2192403 - G 70 -9.5 -2.93853 | opp_overlap 2192404, overlap 2192402 GCCCGCCAAGCAAAC CGCCG AGTA CGGCG CCCATAGCTCGGGTA Swoo_1767 2192789 - 2193031 + | hypothetical protein Swoo_1768 2193421 - 2193074 - | RepA domain-containing protein Swoo_1769 2194076 - 2193408 - | hypothetical protein Swoo_1770 2194478 - 2194182 - | type IV pilus assembly PilZ TERM 2091 2194599 - 2194580 - R 91 -13.6 -2.57013 | opp_overlap 2194575, overlap 2194576 TTGGAAGGGAAGTGA CTCAGCCC CGTA GGGCTGAG TGAAGTGTAATGCTG Swoo_1771 2195027 - 2194629 - | phosphate-starvation-inducible E TERM 2092 2195201 - 2195161 - R 84 -7.8 -4.73614 | gap 1, opp_overlap 2195173, overlap 2195163 2195173 GAGGAGTAAAAGAAA GGCATAAAAAAAGCCACCT ATAA AGATGGCT-TTTCTATGGC ACTATTTACATCTGT TERM 2093 2195190 - 2195173 - R 100 -7.7 -5.68039 | opp_overlap 2195173, overlap 2195163 2195161 AAAGGCATAAAAAAA GCCACCT ATAA AGATGGC TTTTCTATGGCACTA TERM 2094 2195173 - 2195190 + r 72 -5.5 -4.53303 | opp_overlap 2195173 2195163 2195161 AAAGGCATAAAAAAA GCCACCT ATAA AGATGGC TTTTCTATGGCACTA Swoo_1772 2196079 - 2195228 - | inositol-phosphate phosphatase TERM 2095 2195899 - 2195921 + g 70 -9.2 -3.25356 | overlap 2195902 CAGCTTCAGCTTCTT TGTCTACGTT TGT AACGTAGTCA TTGATACCTTTGGCT Swoo_1773 2196236 - 2197000 + | RNA methyltransferase Swoo_1774 2197014 - 2197835 + | serine O-acetyltransferase TERM 2096 2197893 - 2197915 + F 84 -6.2 -5.33405 | opp_overlap 2197893 GTAAAACAGGTTAAA TACCCCACCA AAC TCGAGGGGTA TTTTTGTTTAATGGC Swoo_1775 2198053 - 2198514 + | BadM/Rrf2 family transcriptional regulator TERM 2097 2198525 - 2198535 + F 100 -2.6 -6.04378 | overlap 2198517 TATAAGTTAACTTTG TTAT TTT ATAA TTTTTTTTGTACTTT TERM 2098 2198686 - 2198657 - g 77 -3.5 -5.24129 | opp_overlap 2198658, overlap 2198658 GTGTTGCAGAAAAAA TGATGCAGTGCAT GACT ATGGACGGCATCT TTGGTAACCCGGCAT Swoo_1776 2198590 - 2199804 + | cysteine desulfurase IscS Swoo_1777 2199850 - 2200233 + | FeS cluster assembly scaffold IscU Swoo_1778 2200248 - 2200571 + | iron-sulfur cluster assembly protein IscA Swoo_1779 2200583 - 2201107 + | co-chaperone Hsc20 Swoo_1780 2201186 - 2203048 + | Fe-S protein assembly chaperone HscA Swoo_1781 2203072 - 2203410 + | ferredoxin, 2Fe-2S type, ISC system TERM 2099 2203446 - 2203427 - f 75 -7.8 -4.08767 | opp_overlap 2203427 2203443, overlap 2203438 TCTAGCTTTTTAAAA GGTCAGCT AAAT AGCTGGCC TTTTTTGTAGGCCTT TERM 2100 2203427 - 2203446 + F 100 -10 -5.25803 | opp_overlap 2203427 2203438, overlap 2203443 TCTAGCTTTTTAAAA GGTCAGCT AAAT AGCTGGCC TTTTTTGTAGGCCTT Swoo_1782 2203504 - 2203701 + | FeS assembly protein IscX Swoo_1783 2203920 - 2204351 + | nucleoside-diphosphate kinase TERM 2101 2204402 - 2204377 - f 78 -10.5 -3.18199 | opp_overlap 2204382, overlap 2204382 TAACGTGTAACTTAA TAAAAGGAGCC CTCA GGCTCCTTTTT TGTACCTGCTCTCAT TERM 2102 2204382 - 2204397 + F 100 -10.4 -5.28778 | opp_overlap 2204377 2204382 TGTAACTTAATAAAA GGAGCC CTCA GGCTCC TTTTTTGTACCTGCT TERM 2103 2204397 - 2204382 - f 91 -10.4 -4.72029 | opp_overlap 2204382, overlap 2204377 TGTAACTTAATAAAA GGAGCC CTCA GGCTCC TTTTTTGTACCTGCT TERM 2104 2205325 - 2205339 + G 71 -8.6 -3.50422 | overlap 2205322 2205319 AACTTAAGGGGACTA GGTTCT CAG AGAACC TTAGTTCTAGTTAAT TERM 2105 2207137 - 2207127 - g 70 -6.8 -4.09243 | opp_overlap 2207116 2207112 2207127, overlap 2207112 CATAGGTGCGGAAAA CACC TCT GGTG TTGATATTAACTTAG Swoo_1784 2204992 - 2207613 + | TonB-dependent receptor TERM 2106 2207654 - 2207637 - T 93 -11.3 -5.06414 | opp_overlap 2207637 GTGCTCCAATAAAAA GTCGGCT TAAT AGCCGAC TTTTTTATGTGGTAA TERM 2107 2207637 - 2207654 + T 100 -11.3 -5.39721 | opp_overlap 2207637 GTGCTCCAATAAAAA GTCGGCT TAAT AGCCGAC TTTTTTATGTGGTAA Swoo_1785 2208088 - 2207732 - | TraR/DksA family transcriptional regulator Swoo_1786 2209213 - 2208266 - | dihydrouridine synthase DuS TERM 2108 2208678 - 2208695 + g 72 -8.4 -3.5891 | overlap 2208679 TATTCCCAATGGGCC GGAGGG CGGTAA CCCTCC TCTTTGGTTCTAGCA TERM 2109 2209720 - 2209697 - g 81 -9.7 -3.93369 | opp_overlap 2209671 2209693 GGAAGCGCAAGCAAA TCCATTTGG TTATAG CCAAATGGA GTCAGGTTACCAGCT Swoo_1787 2209611 - 2210042 + | hypothetical protein TERM 2110 2210103 - 2210127 + F 100 -13 -4.10188 | opp_overlap 2210107 AGAGCTATTGTTAAT TTAAGGCCAG TTTAT CTGGCCTTAA TTGTTTCTGAGTGTA TERM 2111 2210123 - 2210107 - f 74 -9.4 -3.17723 | opp_overlap 2210103 CTATTGTTAATTTAA GGCCAG TTTAT CTGGCC TTAATTGTTTCTGAG Swoo_1788 2210192 - 2211028 + | hypothetical protein Swoo_1789 2211028 - 2211774 + | hypothetical protein Swoo_1790 2211906 - 2212025 + | hypothetical protein TERM 2112 2212068 - 2212053 - f 74 -9 -3.65696 | opp_overlap 2212053, overlap 2212049 ATTCATATAAACTAA CCACTC TTTT GAGTGG TTTTTTTGTACATGG TERM 2113 2212053 - 2212068 + F 100 -9 -5.64274 | opp_overlap 2212053 2212049 ATTCATATAAACTAA CCACTC TTTT GAGTGG TTTTTTTGTACATGG Swoo_1791 2212204 - 2212572 + | hypothetical protein TERM 2114 2212818 - 2212795 - g 70 -8.9 -3.15364 | opp_overlap 2212795, overlap 2212793 2212792 AGAGTATTAAAACTA TCCCGGATT ATCCAA AACCCGGGA TCCTATTTAGAGACG Swoo_1792 2212749 - 2213294 + | adenine phosphoribosyltransferase TERM 2115 2215605 - 2215586 - g 80 -10.8 -3.39856 | opp_overlap 2215584, overlap 2215582 TAGAGAGTGAATCAA CTCAAGCT TCTG AGCTTGAG GAATCTGTTTCTGAG Swoo_1793 2213404 - 2216139 + | DNA polymerase III, subunits gamma and tau Swoo_1794 2216224 - 2216553 + | hypothetical protein TERM 2116 2216532 - 2216547 + F 75 -7.6 -4.18018 | opp_overlap 2216510 2216524 AATGCAACTGCCACC TGGCAT GAAG ATGCCA TTTTAACTAGGACAC Swoo_1795 2216566 - 2217165 + | recombination protein RecR TERM 2117 2217235 - 2217209 - f 100 -13.8 -4.1523 | opp_overlap 2217209 TTTAATCATAAATAA CCCAGTATCTAG CGA CTAGATCCTGGG TTTTTTTTAATCATT TERM 2118 2217209 - 2217235 + F 100 -13.8 -5.89827 | opp_overlap 2217209 TTTAATCATAAATAA CCCAGTATCTAG CGA CTAGATCCTGGG TTTTTTTTAATCATT Swoo_1796 2217351 - 2219267 + | heat shock protein Hsp90 TERM 2119 2219294 - 2219326 + F 88 -3.5 -5.75822 | gap 1 CTTGGACAGAAATAG GAGGCATGACTTGT TTGGTT AAGAGTC-TGCCTC TTTTTTTACTTTGTA TERM 2120 2219788 - 2219802 + G 78 -6.4 -4.60889 | CTGAGTCGCCTAATG CCGAAG TTA CTTTGG TTTTTGCCGATGCTT Swoo_1797 2219355 - 2220200 + | thioredoxin domain-containing protein TERM 2121 2220489 - 2220476 - g 71 -4.5 -4.68593 | TTCATCATGGAAAAA TACGG TATC CCGCA AATTTCTACTGGCGA Swoo_1798 2220407 - 2221051 + | nucleoside-triphosphate--adenylate kinase TERM 2122 2221074 - 2221087 + F 75 -6.7 -4.36914 | opp_overlap 2221074 TACACCATTTCTAAA TGAGC ACTG GCTCA TTTTATAAAGCCCAC TERM 2123 2221097 - 2221112 + F 100 -10.4 -5.252 | opp_overlap 2221097 GGCTCATTTTATAAA GCCCAC TTTA GTGGGC TTTTTTGTGGGAGTA TERM 2124 2221112 - 2221097 - f 85 -10.4 -3.89346 | opp_overlap 2221097 GGCTCATTTTATAAA GCCCAC TTTA GTGGGC TTTTTTGTGGGAGTA Swoo_1799 2221385 - 2222689 + | inosine kinase TERM 2125 2222739 - 2222721 - T 100 -14.6 -5.63517 | opp_overlap 2222721 TGCTTAAATAAAAAA GGCGTCCA AAT TGGACGCC TTTTTACTGCTTTTA TERM 2126 2222721 - 2222739 + T 100 -14.6 -4.86773 | opp_overlap 2222721 TGCTTAAATAAAAAA GGCGTCCA AAT TGGACGCC TTTTTACTGCTTTTA Swoo_1800 2224071 - 2222761 - | sodium:dicarboxylate symporter TERM 2127 2225337 - 2225353 + G 76 -3.7 -5.03994 | overlap 2225327 TAATGTGTTACAAGC CGATGTT GGT AGCATTG TTTTTGTATCTGCAG Swoo_1801 2224288 - 2226801 + | Ig domain-containing protein TERM 2128 2226847 - 2226816 - T 100 -13.2 -3.97368 | opp_overlap 2226818 2226825, overlap 2226818 2226825 GTTTTAAGTTATAAA GATAAAAAAGGCGC ATAT GCGCCTTTTTTATT GTCAGTTTATTAGTT TERM 2129 2226845 - 2226818 - T 100 -15.8 -3.57808 | opp_overlap 2226818 2226825, overlap 2226816 2226825 TTTAAGTTATAAAGA TAAAAAAGGCGC ATAT GCGCCTTTTTTA TTGTCAGTTTATTAG TERM 2130 2226818 - 2226845 + T 100 -15.8 -3.52234 | opp_overlap 2226818 2226816 2226825, overlap 2226825 TTTAAGTTATAAAGA TAAAAAAGGCGC ATAT GCGCCTTTTTTA TTGTCAGTTTATTAG TERM 2131 2226838 - 2226825 - T 100 -9.5 -5.59879 | opp_overlap 2226818 2226825, overlap 2226818 2226816 TATAAAGATAAAAAA GGCGC ATAT GCGCC TTTTTTATTGTCAGT TERM 2132 2226825 - 2226838 + T 100 -9.5 -5.56673 | opp_overlap 2226825 2226818 2226816, overlap 2226818 TATAAAGATAAAAAA GGCGC ATAT GCGCC TTTTTTATTGTCAGT Swoo_1802 2228227 - 2226890 - | succinylarginine dihydrolase TERM 2133 2228070 - 2228083 + g 100 -6.7 -5.53991 | ACCATTCCCATATCT GCCAA TGCT TTGGC TTTTTTTAATCCCTG TERM 2134 2229576 - 2229565 - g 73 -4.4 -4.86731 | opp_overlap 2229569 TTGGTGTAAAGAAAA CCAT GATG ATGG CTCAACGTCTTTATG Swoo_1803 2228583 - 2231303 + | DNA topoisomerase I TERM 2135 2231338 - 2231357 + T 91 -7.1 -5.43487 | opp_overlap 2231338 TTTTAGCCCTATAAA GCCTCGA TAGTTT TCGGGGC TTTTTTATGTCCTTT TERM 2136 2231549 - 2231534 - T 100 -10.4 -5.64274 | opp_overlap 2231534 TTAGGTATAAAAAAA CCAGCG ATTA CGCTGG TTTTAAAAATAAGTG TERM 2137 2231534 - 2231549 + T 85 -10.4 -4.11692 | opp_overlap 2231534 TTAGGTATAAAAAAA CCAGCG ATTA CGCTGG TTTTAAAAATAAGTG Swoo_1804 2232341 - 2231568 - | hypothetical protein TERM 2138 2231626 - 2231640 + g 70 -10 -2.53831 | overlap 2231625 2231624 TCCTCTTTATTATTT TGCACC ACA GGTGCA GCTTCTTTTTGCGCG Swoo_1805 2232568 - 2233542 + | LysR family transcriptional regulator TERM 2139 2233590 - 2233561 - T 87 -12.3 -3.01924 | opp_overlap 2233561 2233568, overlap 2233568 TATTTTTGTCGAACA TAAAAAACTCGCC TTTT GGCGAGTTTTTTG TTTGTGCTATCAGTG TERM 2140 2233561 - 2233590 + T 100 -14.5 -4.02334 | opp_overlap 2233561 2233568, overlap 2233568 TATTTTTGTCGAACA TAAAAAACTCGCC TTTT GGCGAGTTTTTTG TTTGTGCTATCAGTG TERM 2141 2233568 - 2233583 + T 100 -10.4 -5.73978 | opp_overlap 2233561 2233568, overlap 2233561 GTCGAACATAAAAAA CTCGCC TTTT GGCGAG TTTTTTGTTTGTGCT TERM 2142 2233583 - 2233568 - T 100 -10.4 -5.47159 | opp_overlap 2233568 2233561, overlap 2233561 GTCGAACATAAAAAA CTCGCC TTTT GGCGAG TTTTTTGTTTGTGCT Swoo_1806 2234987 - 2233611 - | L-serine dehydratase 1 TERM 2143 2234286 - 2234297 + g 70 -5.8 -4.38927 | overlap 2234284 2234283 TTTTAAGCCTCCTGG GAGG ATCC CCTC TTTCTTATATCCGCG TERM 2144 2235277 - 2235287 + H 70 -2.6 -5.1523 | ATCTACTCAGCCAAT TAAT CAC ATTA TTTTTATATTATAGG Swoo_1807 2235310 - 2236323 + | glycoside hydrolase family 3 protein TERM 2145 2236367 - 2236336 - f 89 -11.9 -3.25539 | opp_overlap 2236334, overlap 2236334 TAATTGTAACTAATA TTTGGAATATTGA TTCACC TCAATATTCCAAA AGTGCAACTTAGTTA Swoo_1808 2236417 - 2236956 + | hypothetical protein TERM 2146 2236965 - 2236984 + F 83 -10 -3.96298 | GGGATGATTCAGTGA GTGCCGTA CTAT TACGGCGC TTTAATTGCTCGCTC TERM 2147 2237354 - 2237378 + F 100 -3.6 -6.13 | GTATGTCGCCCGATG CAGCTAATTA TTTTT TTGTTAGCTG TTTTTTTTTGCATGT Swoo_1809 2237447 - 2237734 + | acylphosphatase Swoo_1810 2238669 - 2237731 - | hypothetical protein TERM 2148 2238526 - 2238539 + g 74 -2.3 -5.22794 | overlap 2238533 GGTGTTGATTAACGT GACCT GATC AGGAC TTTTTTCCTGATTGT Swoo_1811 2242144 - 2238671 - | transcription-repair coupling factor TERM 2149 2238977 - 2238991 + g 72 -5.7 -4.45544 | TAGGAGTCCAAAGCG GTCGA TTAAC TCGAC TTTTAATTCATCCAA TERM 2150 2241164 - 2241151 - G 76 -3.8 -5.07107 | opp_overlap 2241151, overlap 2241152 TAAAGGCGGAAAAAA GCTG CTCGGT CAGC AGGTATAGTGACTTT TERM 2151 2241804 - 2241787 - G 79 -9.9 -3.78934 | opp_overlap 2241802 2241803, overlap 2241795 TTGGTGGCAGAAGAA CCATCAG AGTA CTGATGG GGACTATCACTACTC TERM 2152 2241949 - 2241931 - G 72 -7.4 -4.08689 | CAGGGAACAACCAAA CAGGAAGA GTG TCGTCCTG AAGAAGATAATTTAG TERM 2153 2242234 - 2242245 + r 70 -5.8 -4.33004 | TTATGTCGCTTTTTT CGCA AGCT TGCG TTGTTTTAATTGCCT Swoo_1812 2242812 - 2242219 - | hypothetical protein TERM 2154 2242810 - 2242826 + g 75 -4.4 -4.99638 | GCTTGAGTCAGTGAT CAAGGG ATTTC CTCTTG TTTTTATATAGCTAT TERM 2155 2243853 - 2243841 - g 76 -7.7 -4.21194 | TTGCAGTATTGAAAA CTCAG GGG CTGAG CACAGCGAATGTGAT Swoo_1813 2242892 - 2244142 + | LolC/E family lipoprotein releasing system, transmembrane protein Swoo_1814 2244230 - 2244940 + | lipoprotein releasing system, ATP-binding protein TERM 2156 2245389 - 2245377 - g 77 -4.9 -4.89852 | TGAGACTGATAAAAA TAACA TAG TGTTA GGTAGAGGTTTGGCA Swoo_1815 2244937 - 2246193 + | LolC/E family lipoprotein releasing system, transmembrane protein Swoo_1816 2246220 - 2246720 + | hypothetical protein TERM 2157 2246750 - 2246732 - T 72 -7.5 -3.82191 | opp_overlap 2246729 2246732, overlap 2246729 GTAAGTCCACAATAA GAAACAC CAAGC GTGTTTC CTATTGTATCGAGCG Swoo_1817 2247297 - 2246791 - | hypothetical protein TERM 2158 2247160 - 2247150 - G 74 -2.4 -5.1963 | TCCAAGCAACAAAAA GGCC GAC GGCA AAGGCTGCTGGAGCC Swoo_1818 2247329 - 2249626 + | DNA internalization-related competence protein ComEC/Rec2 Swoo_1819 2249661 - 2251475 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 2159 2251586 - 2251607 + G 83 -10.9 -3.6869 | GTTGTTTTGGTGTGT CAGTAGCCT TCGT AGGCTGCTG TTTAAGCTTGGTATC Swoo_1820 2251479 - 2252504 + | tetraacyldisaccharide 4'-kinase Swoo_1821 2252494 - 2252670 + | hypothetical protein TERM 2160 2252706 - 2252691 - f 79 -9 -4.19817 | opp_overlap 2252691 GCTATGTAGTCAAAA GCGCTT TTAC AAGCGC TTTTTTGTTTCTCTT TERM 2161 2252691 - 2252706 + F 100 -9 -5.7827 | opp_overlap 2252691 GCTATGTAGTCAAAA GCGCTT TTAC AAGCGC TTTTTTGTTTCTCTT TERM 2162 2253156 - 2253144 - g 74 -7.7 -4.08767 | CCGATGTGGGCAAAA CACTC AGT GAGTG GATAGTAAATCCTGA Swoo_1822 2252873 - 2253595 + | Mn2+-dependent serine/threonine protein kinase Swoo_1823 2254164 - 2254448 + | heat shock protein DnaJ domain-containing protein TERM 2163 2254825 - 2254835 + G 71 -2.4 -5.06816 | TTCTGATTGAGAGCT GTGC AGT GCTC TTTTTGTTAGAGAAT Swoo_1824 2254467 - 2254964 + | hypothetical protein TERM 2164 2255342 - 2255354 + G 71 -4.8 -4.46155 | GAGTGTATCGCTGAA GACC CTGCC GGTC TTTTCTACCTCTCTA Swoo_1825 2254961 - 2255716 + | hypothetical protein TERM 2165 2256051 - 2256031 - g 78 -6.2 -4.63184 | gap 1 AAGTCATTTCAAAAA GGTTG-GAG CATG CTCACAACC GTGAGTAAGTATAAG Swoo_1826 2255728 - 2256621 + | hypothetical protein TERM 2166 2256646 - 2256671 + T 100 -17.7 -5.35222 | opp_overlap 2256646 TTAGATAAACAGAAA GCGGAAACACC GATG GGTGTTTCCGC TTTTTTATACCTTTT TERM 2167 2256671 - 2256646 - T 100 -17.7 -4.43283 | opp_overlap 2256646 TTAGATAAACAGAAA GCGGAAACACC GATG GGTGTTTCCGC TTTTTTATACCTTTT Swoo_1827 2257567 - 2256692 - | beta-lactamase domain-containing protein TERM 2168 2257665 - 2257642 - R 100 -15.4 -3.62775 | opp_overlap 2257626 2257642 2257646, overlap 2257626 2257646 AGCACTTGGTAACAA CAAAGGCTGC TTTT GCAGCCTTTG TTTCACATAATCAGA TERM 2169 2257642 - 2257665 + r 100 -15.4 -3.62096 | opp_overlap 2257626 2257642 2257646, overlap 2257626 2257646 AGCACTTGGTAACAA CAAAGGCTGC TTTT GCAGCCTTTG TTTCACATAATCAGA TERM 2170 2257661 - 2257646 - R 89 -10.4 -4.44667 | opp_overlap 2257626 2257646 2257642, overlap 2257626 2257642 CTTGGTAACAACAAA GGCTGC TTTT GCAGCC TTTGTTTCACATAAT TERM 2171 2257646 - 2257661 + r 89 -10.4 -4.44448 | opp_overlap 2257626 2257642 2257646, overlap 2257626 2257642 CTTGGTAACAACAAA GGCTGC TTTT GCAGCC TTTGTTTCACATAAT Swoo_1828 2260771 - 2257694 - | acriflavin resistance protein TERM 2172 2260270 - 2260247 - G 75 -11 -2.9155 | opp_overlap 2260244, overlap 2260242 2260249 TTGCTCAACACCATA GAGGGTGACT TGTG AGACACCCTC CACTCGTTCAAGGGG Swoo_1829 2264028 - 2260768 - | acriflavin resistance protein TERM 2173 2261899 - 2261912 + g 75 -5.3 -4.87893 | opp_overlap 2261891 2261899 TTTAAAACTAAAGAG TTCAG GGTG CTGAA TTTTTGCTTCCAGTT TERM 2174 2263645 - 2263659 + g 88 -4.2 -5.47218 | opp_overlap 2263632 2263645 AAGGTTTGGGTTAAA CCGC AGTAATA GCGG TTTTTTTACATCAAG TERM 2175 2263936 - 2263913 - G 77 -9.6 -3.59979 | overlap 2263914 GTGGGGTAGCTTAAA TCTGGCAGTA ACTT TACTGCCAGC CTAGAGAAGCCAACC TERM 2176 2263935 - 2263914 - G 85 -13.1 -2.75844 | overlap 2263913 TGGGGTAGCTTAAAT CTGGCAGTA ACTT TACTGCCAG CCTAGAGAAGCCAAC Swoo_1830 2265121 - 2264042 - | RND family efflux transporter MFP subunit Swoo_1831 2265400 - 2265876 + | GCN5-related N-acetyltransferase TERM 2177 2265917 - 2265933 + T 100 -12.3 -4.65895 | opp_overlap 2265917 TATGACATTAAAAAA GGCACTC AAT GAGTGCC TTTTTGGATAACAGA TERM 2178 2265933 - 2265917 - T 100 -12.3 -5.23316 | opp_overlap 2265917 TATGACATTAAAAAA GGCACTC AAT GAGTGCC TTTTTGGATAACAGA Swoo_1832 2267254 - 2265962 - | citrate synthase I TERM 2179 2267567 - 2267578 + H 73 -3 -5.18371 | opp_overlap 2267567 CTAAAATGGTTAAAT GTTT GTTT AAAC TTTTCTTTTGTGAAA Swoo_1833 2267686 - 2268060 + | succinate dehydrogenase, cytochrome b556 subunit Swoo_1834 2268054 - 2268401 + | succinate dehydrogenase, hydrophobic membrane anchor protein Swoo_1835 2268402 - 2270168 + | succinate dehydrogenase, flavoprotein subunit TERM 2180 2270470 - 2270490 + G 71 -8.3 -3.56558 | CCTGGCATGCCTGTT GTCCGCGAT CTT ATTGTGGAC TTATCTCAATTCTAC Swoo_1836 2270179 - 2270886 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 2181 2270931 - 2270958 + F 100 -13.6 -4.57353 | opp_overlap 2270933, overlap 2270923 TATATAGCTCGAATT GAGTCACTTTTC ATTT GAAAAGTGGCTC TTTTGTGTAATGGAA TERM 2182 2273777 - 2273765 - g 74 -7.7 -4.14472 | opp_overlap 2273765 2273770 GGAAGAGCCTCAAAA CCAAG GTG CTTGG TACTGTAGTCAACAC Swoo_1837 2271108 - 2273930 + | 2-oxoglutarate dehydrogenase, E1 subunit Swoo_1838 2273960 - 2275150 + | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Swoo_1839 2275262 - 2276428 + | succinyl-CoA synthetase, beta subunit Swoo_1840 2276428 - 2277300 + | succinyl-CoA synthetase, alpha subunit TERM 2183 2277322 - 2277336 + T 100 -12.8 -5.36441 | opp_overlap 2277322 TTTCCAGTTAAAAAA GGCGCC TAT GGCGCC TTTTTTGTGTCAGGA TERM 2184 2277336 - 2277322 - T 100 -12.8 -5.08824 | opp_overlap 2277322 TTTCCAGTTAAAAAA GGCGCC TAT GGCGCC TTTTTTGTGTCAGGA Swoo_1841 2279019 - 2277376 - | ferredoxin-dependent glutamate synthase TERM 2185 2279449 - 2279435 - R 100 -10 -5.74122 | opp_overlap 2279435 TATGACATAAAAAAA CCAGCA TTA TGCTGG TTTTAAATTAATTGA TERM 2186 2279435 - 2279449 + r 86 -10 -4.32201 | opp_overlap 2279435 TATGACATAAAAAAA CCAGCA TTA TGCTGG TTTTAAATTAATTGA Swoo_1842 2279935 - 2279504 - | ferric uptake regulator family protein TERM 2187 2279826 - 2279843 + g 72 -5.5 -4.51097 | overlap 2279827 CTCTTATAGAGATCT TCGGCAC TGAT GTGCTGG TTTTCTGGTCCTTGC Swoo_1843 2280224 - 2280988 + | silent information regulator protein Sir2 TERM 2188 2281001 - 2280978 - f 85 -10.4 -4.10161 | overlap 2280999 CATTAGTGCTGAAAA GTGCTAACTG ATGC CAGTTAACAC CTATGAGGCTAAACC Swoo_1844 2280988 - 2281479 + | hypothetical protein TERM 2189 2281544 - 2281580 + F 81 -9.6 -3.92542 | gap 1, opp_overlap 2281552, overlap 2281552 TCCACCTCAATAATG GCGGC-AAAGTGATTCG AGCT CTAATCACTTTTGTCGC TTCTTTAAGACTCAA Swoo_1845 2281833 - 2282837 + | substrate-binding region of ABC-type glycine betaine transport system Swoo_1846 2282906 - 2283802 + | binding-protein-dependent transport systems inner membrane component TERM 2190 2284932 - 2284950 + G 71 -8.8 -3.53224 | GTCGTGGATGATGAT GGAGACCT ACA AGGCCTCC TTTCAAGAGAAGATC Swoo_1847 2283795 - 2285036 + | glycine betaine/L-proline ABC transporter, ATPase subunit Swoo_1848 2285065 - 2286285 + | hypothetical protein TERM 2191 2286326 - 2286355 + T 100 -9.3 -5.28176 | opp_overlap 2286326 2286323 GAATTTAAAAAGTGA GGTGAGTTTAGTC TATT GACTATTCTCACC TTTTTTGTAAGTGAA TERM 2192 2286355 - 2286326 - T 72 -9.3 -2.86432 | opp_overlap 2286326, overlap 2286323 GAATTTAAAAAGTGA GGTGAGTTTAGTC TATT GACTATTCTCACC TTTTTTGTAAGTGAA Swoo_1849 2286596 - 2286351 - | hypothetical protein Swoo_1850 2287096 - 2286611 - | GCN5-related N-acetyltransferase Swoo_1851 2287603 - 2287112 - | GCN5-related N-acetyltransferase Swoo_1852 2288180 - 2287794 - | hypothetical protein Swoo_1853 2290027 - 2288729 - | N-isopropylammelide isopropylaminohydrolase Swoo_1854 2291225 - 2290038 - | permease for cytosine/purines uracil thiamine allantoin TERM 2193 2291416 - 2291438 + r 79 -8.5 -4.14576 | opp_overlap 2291410 TAGTGATAATCCATA CCCTGTCAA GGATA TTGATAGGG TTATTCTATTTTTGA Swoo_1855 2292510 - 2291605 - | hypothetical protein Swoo_1856 2292805 - 2293122 + | hypothetical protein TERM 2194 2293155 - 2293181 + F 91 -9.4 -4.89838 | overlap 2293154 2293156 GGTAATATTTATATC TGCTGGCAACCT GCA AGTTTGCCAGCC TTTTCTATTTGTTAA TERM 2195 2293156 - 2293180 + F 95 -12.9 -3.52276 | overlap 2293154 2293155 GTAATATTTATATCT GCTGGCAACCT GCA AGTTTGCCAGC CTTTTCTATTTGTTA TERM 2196 2293477 - 2293453 - f 76 -2.9 -5.47914 | opp_overlap 2293475, overlap 2293455 2293475 AAAAATGACAAAAAA TCCGTATTACA CTA TATAACACGTA ATAAGCAGCTAATTA TERM 2197 2294316 - 2294330 + G 75 -8.6 -3.74077 | opp_overlap 2294305, overlap 2294304 GAGACTCCCGTTGGG GGAGAT ACT ATCTCC TTTAGGTATGTGGCA Swoo_1857 2293833 - 2294447 + | hypothetical protein Swoo_1858 2297228 - 2294460 - | serine/threonine protein kinase TERM 2198 2295752 - 2295766 + g 74 -4.2 -4.95484 | CTGATACCGTCCAGC GCTGAG AGT CTGAGC TTTTATTTAATCGTG TERM 2199 2296036 - 2296065 + g 77 -10.1 -3.45324 | opp_overlap 2296027, overlap 2296027 2296034 TTAAAGCTTGAGCTT TCAAGTGTTGGTG GGAT CACTACCACTTGA TGTTTAATCGCCGTG TERM 2200 2296261 - 2296275 + g 76 -10 -3.27676 | overlap 2296258 2296256 GTATTGTCTTTAGAG GGAGCA TGA TGCTCC TCTGTTTCGGTGCCT Swoo_1859 2298297 - 2297272 - | forkhead-associated protein Swoo_1860 2298665 - 2300869 + | molybdopterin oxidoreductase TERM 2201 2301020 - 2301010 - g 86 -3.2 -5.48303 | ACAAGTTCAAAAAAA GAGA CGG CCTC AAATAGAGCTGAGGA Swoo_1861 2300905 - 2302953 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Swoo_1862 2303165 - 2303653 + | hypothetical protein Swoo_1863 2304119 - 2304781 + | cob(II)yrinic acid a,c-diamide reductase Swoo_1864 2305501 - 2304788 - | short-chain dehydrogenase/reductase SDR Swoo_1865 2306881 - 2305514 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 2202 2306546 - 2306564 + g 86 -7.4 -5.055 | TTTCGTGAGGTTATC GCTGGTCA TAT TCACCAGC TTTTTTGACAGTTCA Swoo_1866 2306992 - 2308056 + | biotin synthase TERM 2203 2309046 - 2309029 - g 70 -6.9 -4.05033 | opp_overlap 2309029 CCTATTTTAGACAAA GCTGCGC CACG GCTCAGC TGAATTTAAGTGGAT Swoo_1867 2308071 - 2309273 + | 8-amino-7-oxononanoate synthase Swoo_1868 2309322 - 2310113 + | methyltransferase type 11 Swoo_1869 2310117 - 2310785 + | dethiobiotin synthase Swoo_1870 2311076 - 2311936 + | HtpX domain-containing protein TERM 2204 2312144 - 2312161 + F 100 -12.7 -5.56264 | opp_overlap 2312144 GATTGTTGAATAGAA CGGGAGC CTAG GCTCCCG TTTTTTATGTTTAAA TERM 2205 2312161 - 2312144 - f 95 -12.7 -3.66288 | opp_overlap 2312144 GATTGTTGAATAGAA CGGGAGC CTAG GCTCCCG TTTTTTATGTTTAAA Swoo_1871 2312465 - 2312839 + | cytochrome c3 TERM 2206 2312895 - 2312868 - f 85 -11.4 -3.58343 | opp_overlap 2312873, overlap 2312873 GCCATTATGTTGAAA TAAAATGCCAGC ACTT GCTGGCATTTTT GTGTCTGCAGTCTCT TERM 2207 2312890 - 2312873 - f 93 -11.3 -4.87803 | opp_overlap 2312873, overlap 2312868 TATGTTGAAATAAAA TGCCAGC ACTT GCTGGCA TTTTTGTGTCTGCAG TERM 2208 2312873 - 2312890 + F 93 -11.3 -5.03994 | opp_overlap 2312868 2312873 TATGTTGAAATAAAA TGCCAGC ACTT GCTGGCA TTTTTGTGTCTGCAG TERM 2209 2313589 - 2313618 + G 71 -8.5 -3.45324 | opp_overlap 2313582 2313580 2313578, overlap 2313583 2313587 CACACAGAGGCGTGG CACGCTCTGTGAC CTTT GTGACCGGGCGTG TGTTTGATAACAGTG Swoo_1872 2313132 - 2313992 + | uroporphyrin-III C-methyltransferase TERM 2210 2314431 - 2314441 + G 74 -8.2 -4.00756 | TTATGTTGCCTTACT CGGG ATC CCCG TTGTTTCATCACCTA Swoo_1873 2313997 - 2315127 + | glycosyl transferase family protein Swoo_1874 2315128 - 2315673 + | response regulator TERM 2211 2315998 - 2316027 + F 100 -20.1 -5.93252 | overlap 2315990 AATGGATTGGCAATG GCGCCATGTTCCC ACTG GGGAGCATGGCGC TTTTTTCTTTTTAAA TERM 2212 2316164 - 2316176 + G 79 -7.7 -4.37092 | TTGTGGGTAACGGCA TGGTG GGT CACCA TTTTATAGAGCAGCT TERM 2213 2317060 - 2317076 + G 100 -12.3 -4.25104 | opp_overlap 2317060 2317059 TTATCGAGCAGTAAG GGAGCTG ACT CAGCTCC TTTTAGTGGCGCAGA TERM 2214 2317076 - 2317060 - g 81 -12.3 -2.53164 | opp_overlap 2317060, overlap 2317059 TTATCGAGCAGTAAG GGAGCTG ACT CAGCTCC TTTTAGTGGCGCAGA TERM 2215 2318377 - 2318362 - g 75 -9 -3.6692 | opp_overlap 2318365 2318374, overlap 2318360 TTTTATTCCAAAACA GCTGCA CGTT TGCAGC GTACCTCTGTTTGGC Swoo_1875 2316070 - 2318712 + | nitrite reductase (NAD(P)H), large subunit TERM 2216 2318872 - 2318893 + G 79 -9.5 -3.83998 | gap 1, opp_overlap 2318870 2318872 ATGCCATGAGCAATA CTGAC-CCTG CTA CAGGAGTCAG TTTACTCTCCCGTGG TERM 2217 2318893 - 2318872 - g 72 -9.5 -3.17229 | gap 1, opp_overlap 2318872, overlap 2318870 ATGCCATGAGCAATA CTGAC-CCTG CTA CAGGAGTCAG TTTACTCTCCCGTGG Swoo_1876 2318745 - 2319107 + | nitrite reductase (NAD(P)H), small subunit Swoo_1877 2319104 - 2320570 + | nitrite transporter Swoo_1878 2320570 - 2322369 + | serine/threonine protein kinase Swoo_1879 2322529 - 2323695 + | TPR repeat-containing protein Swoo_1880 2324102 - 2324734 + | LuxR family transcriptional regulator TERM 2218 2324754 - 2324785 + F 83 -11.8 -3.08642 | ACTCTATCCATTTAT TCACATTTGCCA AGTTTTTA TGGCAAATGTGA TTAACTGCGTCCTAT Swoo_1881 2325023 - 2325394 + | hypothetical protein TERM 2219 2325439 - 2325417 - T 78 -10 -3.28119 | opp_overlap 2325413 2325417 AGGGAGCTATATGAA GCCTTTCATT GTA AATAAAAGGC TTCATATAGAGGGGA Swoo_1882 2325873 - 2325460 - | TetR family transcriptional regulator Swoo_1883 2326139 - 2326495 + | histidine triad (HIT) protein TERM 2220 2327246 - 2327276 + G 82 -10.5 -3.88787 | gap 1 AGGTAACCCTATCCT CCCAGCTATTCACG GTGG CGTGATT-GCTGGG TTTATGGAGATGTCG Swoo_1884 2326512 - 2327510 + | thioesterase superfamily protein Swoo_1885 2327571 - 2327960 + | hypothetical protein TERM 2221 2327981 - 2328025 + F 100 -17.6 -3.21595 | opp_overlap 2327994, overlap 2327982 2327994 AGCTTATTCGGAGTT ACGTAATAAAAAATACCAAC ATTGA GTTGGTATTTTTTATTACGA TTGATGCTAGAAGTT TERM 2222 2327982 - 2328024 + F 100 -21.1 -2.52635 | opp_overlap 2327994, overlap 2327981 2327994 GCTTATTCGGAGTTA CGTAATAAAAAATACCAAC ATTGA GTTGGTATTTTTTATTACG ATTGATGCTAGAAGT TERM 2223 2327994 - 2328012 + F 100 -7.5 -5.4756 | opp_overlap 2327994, overlap 2327982 2327981 TTACGTAATAAAAAA TACCAAC ATTGA GTTGGTA TTTTTTATTACGATT TERM 2224 2328012 - 2327994 - f 100 -7.5 -5.4833 | opp_overlap 2327994 2327982 2327981 TTACGTAATAAAAAA TACCAAC ATTGA GTTGGTA TTTTTTATTACGATT Swoo_1886 2328261 - 2330450 + | TonB-dependent receptor plug TERM 2225 2330461 - 2330476 + F 81 -10.4 -3.50332 | opp_overlap 2330459 TCTAGTTAAAGTACT GCCGGA AATT TCCGGC TTAATTATCTAAATG Swoo_1887 2330557 - 2330817 + | hypothetical protein TERM 2226 2330895 - 2330921 + F 89 -10.3 -4.4267 | CATGCTTGAAGTTGA GCTCATATTCA GGACG TGGATATGAGC TTTTAAGTTTTACCA Swoo_1888 2330952 - 2331590 + | nicotinamide mononucleotide transporter PnuC Swoo_1889 2331616 - 2332665 + | aminoglycoside phosphotransferase Swoo_1890 2333072 - 2333659 + | DoxX family protein TERM 2227 2333699 - 2333727 + F 84 -11.8 -3.26722 | opp_overlap 2333704, overlap 2333704 AATGTCATAAGTTGT GTAAATCCCACC AATTA GGTGGGATTTTC TATTATCCCTATCAA TERM 2228 2333722 - 2333704 - f 81 -10.3 -3.56099 | opp_overlap 2333699 2333704 CATAAGTTGTGTAAA TCCCACC AATTA GGTGGGA TTTTCTATTATCCCT TERM 2229 2333704 - 2333722 + F 91 -10.3 -4.74285 | opp_overlap 2333704, overlap 2333699 CATAAGTTGTGTAAA TCCCACC AATTA GGTGGGA TTTTCTATTATCCCT TERM 2230 2333945 - 2333955 + G 77 -6.8 -4.48713 | ATCATGCGGGATTAG CTCC TTG GGAG TTTATTATTGCTCAA Swoo_1891 2333818 - 2334366 + | nitroreductase TERM 2231 2334410 - 2334394 - T 85 -9.4 -4.28774 | opp_overlap 2334394 CTATTTAATGTAAAA GCGTCC AAGTA GGACGC TTTTTTATATTCAAT TERM 2232 2334394 - 2334410 + T 100 -9.4 -5.48063 | opp_overlap 2334394 CTATTTAATGTAAAA GCGTCC AAGTA GGACGC TTTTTTATATTCAAT Swoo_1892 2335165 - 2334425 - | beta-lactamase domain-containing protein Swoo_1893 2335834 - 2335205 - | methyl-accepting chemotaxis protein Swoo_1894 2335907 - 2336413 + | GCN5-related N-acetyltransferase Swoo_1895 2336534 - 2337130 + | GCN5-related N-acetyltransferase TERM 2233 2337609 - 2337591 - g 70 -7.5 -4.00124 | CATGGCATAAGTAAA CTTGTGT TAGAG ACACAAG AGGCTAATCAGCCTG Swoo_1896 2337246 - 2337701 + | GCN5-related N-acetyltransferase Swoo_1897 2337753 - 2338205 + | hypothetical protein Swoo_1898 2338352 - 2338738 + | hypothetical protein Swoo_1899 2338995 - 2339681 + | ABC transporter related TERM 2234 2340333 - 2340306 - g 76 -6.2 -4.48743 | opp_overlap 2340307, overlap 2340307 AAAAGCGGAAATAAA GGGGCCGCTACT TTAC AGTAGCGAACCT TGGTCTGATAAAAAA TERM 2235 2340332 - 2340307 - g 72 -9.7 -3.27619 | opp_overlap 2340307, overlap 2340306 AAAGCGGAAATAAAG GGGCCGCTACT TTAC AGTAGCGAACC TTGGTCTGATAAAAA Swoo_1900 2339671 - 2340666 + | multidrug resistance efflux pump-like protein Swoo_1901 2340663 - 2341874 + | secretion protein HlyD family protein Swoo_1902 2341871 - 2343130 + | membrane-fusion protein Swoo_1903 2343127 - 2344386 + | hypothetical protein TERM 2236 2344394 - 2344424 + F 100 -17 -4.87592 | overlap 2344396 GAGACTAGTCATCAT TATGCAGCCCACTT TTG AAGTGGGCTGCATC TTTTCTTCTATCTAA TERM 2237 2344396 - 2344422 + F 100 -19.6 -4.04697 | overlap 2344394 GACTAGTCATCATTA TGCAGCCCACTT TTG AAGTGGGCTGCA TCTTTTCTTCTATCT TERM 2238 2344506 - 2344516 + F 88 -3.2 -5.76949 | TTCAGCGGGAGCGAG GCTT TCA GAGC TTTTTTTTGAGAGTG TERM 2239 2345654 - 2345642 - g 72 -7.7 -3.87569 | CAAAAAAGCCAACAA CCACT TTC AGTGG CATGGATTGCAAGGC Swoo_1904 2344638 - 2345672 + | hypothetical protein TERM 2240 2345688 - 2345726 + T 100 -12.7 -4.73388 | opp_overlap 2345691 2345719 2345720, overlap 2345691 ACTTATACAGTATAA AAACTGCGTTTAACTTA TTAGT TGAGTTAAACGCAGTTG TTTTTACTGCACGTT TERM 2241 2345691 - 2345723 + T 100 -14.4 -4.47707 | opp_overlap 2345691 2345719 2345720, overlap 2345688 TATACAGTATAAAAA CTGCGTTTAACTTA TTAGT TGAGTTAAACGCAG TTGTTTTTACTGCAC TERM 2242 2345723 - 2345691 - T 100 -12.2 -4.96762 | opp_overlap 2345691 2345688, overlap 2345719 2345720 TATACAGTATAAAAA CTGCGTTTAACTTA TTAGT TGAGTTAAACGCAG TTGTTTTTACTGCAC Swoo_1905 2346771 - 2345740 - | hypothetical protein TERM 2243 2346546 - 2346560 + g 76 -4.2 -5.09762 | overlap 2346547 CTGAACAGGTTTTTA ATGACC TTG GGTCAC TTTTTATATTGAAAT Swoo_1906 2347040 - 2347714 + | hypothetical protein Swoo_1907 2349492 - 2347765 - | TPR repeat-containing protein Swoo_1908 2349792 - 2350487 + | aspartate racemase Swoo_1909 2350771 - 2351325 + | OmpA domain-containing protein TERM 2244 2351392 - 2351352 - T 73 -9.2 -2.9587 | gap 1, opp_overlap 2351357, overlap 2351357 CTAAAGGTTAAATGA CAAAAGGGATACTGATACC GTTA GGTGTC-GTATCCCTTTTT TGTATTTCTCACTTA TERM 2245 2351357 - 2351387 + T 100 -11.3 -5.59879 | gap 1, opp_overlap 2351352 2351357 GGTTAAATGACAAAA GGGATACTGATACC GTTA GGTGTC-GTATCCC TTTTTTGTATTTCTC TERM 2246 2351387 - 2351357 - T 86 -9.1 -4.61566 | gap 1, opp_overlap 2351357, overlap 2351352 GGTTAAATGACAAAA GGGATACTGATACC GTTA GGTGTC-GTATCCC TTTTTTGTATTTCTC Swoo_1910 2352730 - 2351429 - | anaerobic c4-dicarboxylate antiporter TERM 2247 2354579 - 2354610 + G 84 -9.4 -4.24123 | ACGCTTGCACCTGAA CTTGCTGCGGGTGG TAAT CTAACCGTGGCAAG TTTTAACGTTCTTAA Swoo_1911 2353229 - 2356051 + | endonuclease/exonuclease/phosphatase TERM 2248 2356107 - 2356081 - T 100 -13.8 -3.67597 | opp_overlap 2356087, overlap 2356087 CTTTTTAGTTAACAA CAAAAAGCCCGC ATA GCGGGCTTTTTT ACGGCGTGATTTTTG TERM 2249 2356087 - 2356101 + T 100 -12.8 -5.02074 | opp_overlap 2356081 2356087 AGTTAACAACAAAAA GCCCGC ATA GCGGGC TTTTTTACGGCGTGA TERM 2250 2356101 - 2356087 - T 100 -12.8 -5.30348 | opp_overlap 2356087, overlap 2356081 AGTTAACAACAAAAA GCCCGC ATA GCGGGC TTTTTTACGGCGTGA Swoo_1912 2356771 - 2356451 - | hypothetical protein TERM 2251 2356520 - 2356531 + g 70 -5.8 -4.35742 | overlap 2356513 2356524 2356527 GGCTTTCATCGCTTT CTCG GCAG CGAG TTTTGCTACTTCACT Swoo_1913 2356998 - 2356798 - | hypothetical protein Swoo_1914 2360494 - 2357090 - | hypothetical protein TERM 2252 2359948 - 2359958 + g 72 -6.8 -4.19817 | opp_overlap 2359948 2359946 CATCCATCGATAATA GGGT TTC ACCC TTTTGCGTGAGTAAA TERM 2253 2360526 - 2360583 + r 100 -16.5 -2.78384 | opp_overlap 2360536 2360540, overlap 2360531 2360537 2360540 AGTAATTTGTTGAGT TTATACCCAAGCGACCTCAAGATGCTG AATC CTGCACCTTGAAGTTGTTTGGGTATAG TATGATGAAAAAACA TERM 2254 2360531 - 2360578 + r 95 -14.2 -2.87468 | opp_overlap 2360536 2360540, overlap 2360526 2360537 2360540 TTTGTTGAGTTTATA CCCAAGCGACCTCAAGATGCTG AATC CTGCACCTTGAAGTTGTTTGGG TATAGTATGATGAAA TERM 2255 2360569 - 2360540 - R 71 -9.3 -2.56095 | opp_overlap 2360537 2360531 2360526 2360540, overlap 2360536 TTTATACCCAAGCGA CCTCAAGATGCTG AATC CTGCACCTTGAAG TTGTTTGGGTATAGT TERM 2256 2360665 - 2360702 + r 82 -9.3 -4.18644 | opp_overlap 2360665 AAGAGCAATAAAAAA GCCAAGCTAATATTCAT CAGT ATAAGAATTAGCTTGGC TTTCGTTTATATAGT TERM 2257 2360702 - 2360665 - R 100 -9.3 -5.54885 | opp_overlap 2360665 AAGAGCAATAAAAAA GCCAAGCTAATATTCAT CAGT ATAAGAATTAGCTTGGC TTTCGTTTATATAGT Swoo_1915 2361598 - 2360750 - | aldose 1-epimerase TERM 2258 2362326 - 2362311 - g 70 -9 -3.18429 | opp_overlap 2362302 2362313 2362322 GAAAACCGCTACTAA CATGGC GTTT GCCATG TATCCAGGGTTAACT Swoo_1916 2361952 - 2363742 + | acyl-CoA dehydrogenase domain-containing protein TERM 2259 2363791 - 2363831 + F 77 -8.3 -3.93256 | opp_overlap 2363792, overlap 2363792 CTGAAATCTTACCTA ATTGATCTGCGGGGGTTTA TCT TGTGCCTCTGCAGATCAAC TTCTTTCAACGTATA TERM 2260 2363792 - 2363830 + F 82 -11.8 -2.95472 | opp_overlap 2363792, overlap 2363791 TGAAATCTTACCTAA TTGATCTGCGGGGGTTTA TCT TGTGCCTCTGCAGATCAA CTTCTTTCAACGTAT Swoo_1917 2364042 - 2364566 + | PEBP family protein TERM 2261 2364830 - 2364881 + G 93 -12.4 -3.54424 | gap 1, overlap 2364829 AAATTTGTTTCTTAT CGCCTCCTTC-CTCAGCGATTATGG AGT CGATGGTTGATGAGAGAGGGAGGCG TTTAACCAAATCACC TERM 2262 2364960 - 2364937 - g 77 -10.4 -3.53224 | gap 1, opp_overlap 2364935 GATTTTGCTTTGAAA CAGCTACTTGC TAT GCAAG-AGCTG GACTTTACCGAGCAG Swoo_1918 2364589 - 2365368 + | AraC family transcriptional regulator Swoo_1919 2365998 - 2365390 - | hypothetical protein Swoo_1920 2366096 - 2366593 + | GCN5-related N-acetyltransferase Swoo_1921 2366630 - 2367097 + | OsmC family protein TERM 2263 2367177 - 2367148 - f 70 -5.8 -4.23892 | overlap 2367149 2367152 GTCAACTATTTAAAA GTAAGTCGAGTA CTGGCC TACTCGACCTAA CCTGAGTTGTAAATG TERM 2264 2367176 - 2367149 - f 74 -9.3 -3.13853 | overlap 2367148 2367152 TCAACTATTTAAAAG TAAGTCGAGTA CTGGCC TACTCGACCTA ACCTGAGTTGTAAAT TERM 2265 2367173 - 2367152 - f 74 -8.8 -3.70007 | overlap 2367149 2367148 ACTATTTAAAAGTAA GTCGAGTA CTGGCC TACTCGAC CTAACCTGAGTTGTA Swoo_1922 2367465 - 2367746 + | XRE family transcriptional regulator TERM 2266 2367837 - 2367827 - gf 71 -4 -4.77438 | AGCCACCACCAAAAA TTCA AGC TGAA GGACCAGTGATCACA TERM 2267 2367903 - 2367893 - gf 71 -4 -4.7871 | AACCACCACCAAAAA TTCA TGC TGAA GGACCAGTGATCACA Swoo_1923 2367709 - 2368065 + | hypothetical protein Swoo_1924 2368166 - 2368708 + | hypothetical protein Swoo_1925 2369069 - 2368800 - | hypothetical protein TERM 2268 2369208 - 2369239 + r 70 -8.8 -3.14132 | opp_overlap 2369212, overlap 2369210 2369212 TCTAGTTTGGTTAGA AAAAGACCCTTTTG ATGC CAAAAGGGTCTCTG TTAGTCAAAACCGAC TERM 2269 2369210 - 2369237 + r 83 -11.4 -3.13403 | opp_overlap 2369212, overlap 2369208 2369212 TAGTTTGGTTAGAAA AAGACCCTTTTG ATGC CAAAAGGGTCTC TGTTAGTCAAAACCG TERM 2270 2369235 - 2369212 - R 100 -14 -4.82901 | opp_overlap 2369210 2369208 2369212 GTTTGGTTAGAAAAA GACCCTTTTG ATGC CAAAAGGGTC TCTGTTAGTCAAAAC TERM 2271 2369212 - 2369235 + r 95 -14 -3.12895 | opp_overlap 2369212, overlap 2369210 2369208 GTTTGGTTAGAAAAA GACCCTTTTG ATGC CAAAAGGGTC TCTGTTAGTCAAAAC Swoo_1926 2371358 - 2369295 - | 5'-nucleotidase domain-containing protein TERM 2272 2370793 - 2370805 + g 74 -5.5 -4.68724 | overlap 2370785 TGTTGATCGCCATTG CTGTC GAT GACGG TTTTCTCTTCGATGA TERM 2273 2371650 - 2371679 + r 95 -13.7 -2.95093 | opp_overlap 2371656, overlap 2371656 ATAAAAGACAGGCAT AAAAAAGCACGGC ATTA GCCGTGCTTTTTA CTTTCATTAGCCTCT TERM 2274 2371656 - 2371673 + r 100 -12.7 -5.04222 | opp_overlap 2371656, overlap 2371650 GACAGGCATAAAAAA GCACGGC ATTA GCCGTGC TTTTTACTTTCATTA TERM 2275 2371673 - 2371656 - R 100 -12.7 -5.29782 | opp_overlap 2371656 2371650 GACAGGCATAAAAAA GCACGGC ATTA GCCGTGC TTTTTACTTTCATTA Swoo_1927 2373876 - 2371699 - | peptidyl-dipeptidase Dcp TERM 2276 2375052 - 2375085 + G 77 -10.3 -3.48593 | opp_overlap 2375052 2375054, overlap 2375063 TCCTCTTCGCCAAAA GATGGGGTGAATGCG GTAA CGCATTTAGCCCAAC TTCTGTCAGCACATC TERM 2277 2375085 - 2375052 - g 74 -8.1 -4.07568 | opp_overlap 2375052 2375063, overlap 2375054 TCCTCTTCGCCAAAA GATGGGGTGAATGCG GTAA CGCATTTAGCCCAAC TTCTGTCAGCACATC TERM 2278 2375083 - 2375054 - g 75 -9.3 -3.63744 | opp_overlap 2375052 2375063, overlap 2375052 CTCTTCGCCAAAAGA TGGGGTGAATGCG GTAA CGCATTTAGCCCA ACTTCTGTCAGCACA Swoo_1928 2374134 - 2375660 + | dipeptidase TERM 2279 2375668 - 2375698 + T 76 -9 -3.82486 | opp_overlap 2375672, overlap 2375670 2375672 AGAAGTAAGGTGTAA AAAATCGCCAGTGT TTG GCACTGGCGATCTC TTGTTACTATTGACT TERM 2280 2375670 - 2375696 + T 85 -11.6 -3.49169 | opp_overlap 2375672, overlap 2375668 2375672 AAGTAAGGTGTAAAA AATCGCCAGTGT TTG GCACTGGCGATC TCTTGTTACTATTGA TERM 2281 2375672 - 2375694 + T 100 -14.2 -3.30816 | opp_overlap 2375672, overlap 2375670 2375668 GTAAGGTGTAAAAAA TCGCCAGTGT TTG GCACTGGCGA TCTCTTGTTACTATT TERM 2282 2375694 - 2375672 - T 100 -13.5 -5.055 | opp_overlap 2375670 2375668 2375672 GTAAGGTGTAAAAAA TCGCCAGTG TTTGG CACTGGCGA TCTCTTGTTACTATT Swoo_1929 2377500 - 2375755 - | gamma-glutamyltransferase TERM 2283 2377569 - 2377585 + H 79 -3.7 -5.40474 | AAAACAAATTGCAAG TGGTAGC CAA GTTATCA TTTTTTTGCCAGAGT Swoo_1930 2377677 - 2378894 + | hypothetical protein Swoo_1931 2379508 - 2378891 - | lysine exporter protein LysE/YggA TERM 2284 2378972 - 2378991 + g 71 -4.4 -4.72272 | gap 1 GATATTATCCCCACG GCTTA-AGA AGA TCTTTAAGC TTTTTCCTCCAGCAG TERM 2285 2379595 - 2379579 - R 100 -9.4 -5.80951 | opp_overlap 2379579 ACTGAAAACAAAAAA CCAGCC ACTTG GGCTGG TTTTACATCTAGGTA TERM 2286 2379579 - 2379595 + r 85 -9.4 -4.24204 | opp_overlap 2379579 ACTGAAAACAAAAAA CCAGCC ACTTG GGCTGG TTTTACATCTAGGTA Swoo_1932 2380700 - 2379660 - | 4-hydroxyphenylpyruvate dioxygenase TERM 2287 2380363 - 2380388 + g 70 -9.1 -3.26319 | gap 1, opp_overlap 2380354, overlap 2380368 CCAATACCGTAGATG GCAGGGTAAGGA TGA TCCTTACTC-GC TTCATCTGCAGGCTT TERM 2288 2381494 - 2381508 + G 75 -8.6 -3.72576 | opp_overlap 2381494 2381491 CCCTTCCAGATATCA CAACCA TTT TGGTTG TTTCATCAAGCCACC Swoo_1933 2380998 - 2381903 + | LysR family transcriptional regulator Swoo_1934 2382272 - 2382628 + | hypothetical protein TERM 2289 2382646 - 2382673 + T 91 -12.8 -3.09844 | opp_overlap 2382651, overlap 2382651 AATACCAATCAGTAT AAAAACGCCAGC ATAT GCTGGCGTTTTA GTTTTACACTCTACA TERM 2290 2382651 - 2382668 + T 100 -12.7 -4.67641 | opp_overlap 2382651, overlap 2382646 CAATCAGTATAAAAA CGCCAGC ATAT GCTGGCG TTTTAGTTTTACACT TERM 2291 2382668 - 2382651 - T 100 -12.7 -4.94902 | opp_overlap 2382646 2382651 CAATCAGTATAAAAA CGCCAGC ATAT GCTGGCG TTTTAGTTTTACACT Swoo_1935 2383688 - 2382696 - | cytochrome-c peroxidase Swoo_1936 2384157 - 2383930 - | integral membrane protein TerC Swoo_1937 2384399 - 2385124 + | ABC transporter Swoo_1938 2385794 - 2385204 - | carboxymuconolactone decarboxylase TERM 2292 2385449 - 2385478 + g 89 -8.6 -4.67608 | opp_overlap 2385444 AGAAATCCAATGCGG CGCGCTCTGCAT CAGTAA ATGCAGGGTGTG TTTTATATTCCCATA TERM 2293 2387110 - 2387091 - g 74 -3.6 -5.1166 | overlap 2387084 2387070 2387068 CATCAAAATCAAAAA TTGATGCA AAGC TGTATCAA AAAATCCTTCCCTAA Swoo_1939 2385969 - 2387399 + | transcriptional regulator Swoo_1940 2387844 - 2387437 - | hypothetical protein TERM 2294 2387550 - 2387537 - G 74 -6.7 -4.3898 | ATGATGGTGACAAAA CATGC TAAG GCATG AGTAATATGTCCTAT Swoo_1941 2388076 - 2388993 + | hypothetical protein Swoo_1942 2389369 - 2389196 - | hypothetical protein TERM 2295 2389734 - 2389746 + H 70 -2.7 -5.05712 | TTTGGCTTGTCAATA GATAT CGA GTATC TTTTTCATTCTTTGT TERM 2296 2389843 - 2389854 + H 89 -3.6 -5.77988 | TGTCCTAATTTGGTT GTGC TAAT GCGC TTTTTTTGTATCTCT Swoo_1943 2389849 - 2391450 + | MscS mechanosensitive ion channel TERM 2297 2391551 - 2391565 + F 78 -5.7 -5.03145 | overlap 2391563 TTAGCAATGTTACCA GAGAC TGAGT GTCTC TTTTTTCGAGAGTTG Swoo_1944 2391585 - 2392529 + | response regulator receiver modulated CheW protein TERM 2298 2392544 - 2392566 + T 83 -10.7 -3.73084 | opp_overlap 2392543 2392548, overlap 2392548 ATAAGTGCTAATCAT TAAAGCAGC GTTAG GCTGCTTTA TATTGTTTTAATACT TERM 2299 2392562 - 2392548 - T 70 -7.1 -3.84246 | opp_overlap 2392548 2392544, overlap 2392543 GTGCTAATCATTAAA GCAGC GTTAG GCTGC TTTATATTGTTTTAA TERM 2300 2392548 - 2392562 + T 78 -7.1 -4.45253 | opp_overlap 2392543 2392548, overlap 2392544 GTGCTAATCATTAAA GCAGC GTTAG GCTGC TTTATATTGTTTTAA TERM 2301 2392623 - 2392609 - T 74 -8.6 -3.69605 | opp_overlap 2392609 GCCAGTTAAAACCAA GTTGAG TCA CTCAAC TCTTCACCCTGTTCA TERM 2302 2392609 - 2392623 + T 70 -8.6 -3.06315 | opp_overlap 2392609 GCCAGTTAAAACCAA GTTGAG TCA CTCAAC TCTTCACCCTGTTCA Swoo_1945 2393267 - 2392599 - | hypothetical protein Swoo_1946 2393692 - 2393333 - | hypothetical protein TERM 2303 2394032 - 2394020 - g 74 -3.3 -5.03314 | overlap 2394021 2394029 TTGAGCTGCAAAAAA CGGCC AAG AGCCA AGGTTTGTCGGCCGA TERM 2304 2394936 - 2394915 - g 70 -7.3 -3.90464 | GCCTAAACAAGATAA CTTAAGCCG AGCA CGGGTTAAG CAACTTCAAGCAAAG Swoo_1947 2393914 - 2395101 + | lytic murein transglycosylase Swoo_1948 2395208 - 2395690 + | peptidylprolyl isomerase FKBP-type TERM 2305 2395685 - 2395673 - f 74 -9.1 -3.60296 | CATGCGCACGGTAAA GGTGG TCA CCACC ACTAGGCTCAAAGAG TERM 2306 2395719 - 2395736 + F 100 -9.9 -5.8901 | opp_overlap 2395719 CTGAGCAGATAGAAA CCAGCAA AATC TTGCTGG TTTTTTGTTTTATGT TERM 2307 2395736 - 2395719 - f 85 -9.9 -4.1523 | opp_overlap 2395719 CTGAGCAGATAGAAA CCAGCAA AATC TTGCTGG TTTTTTGTTTTATGT Swoo_1949 2395771 - 2395992 + | hypothetical protein Swoo_1950 2396104 - 2396775 + | carboxylesterase TERM 2308 2396890 - 2396918 + F 83 -3.9 -5.58522 | gap 1, opp_overlap 2396890 2396887 2396892 TCATTGAAAAAATAA GGTAAGCTTTGC TTAAGT GCT-AGCTTACC TTTTTATTTTGTCTC TERM 2309 2398162 - 2398140 - g 77 -3.5 -5.19879 | opp_overlap 2398140 CCTGAAAGAGAAAAA TGAAAACGA TGAGC TTGTTTTCA TTACTGAAGAGATAG Swoo_1951 2397133 - 2398899 + | 5'-nucleotidase TERM 2310 2398928 - 2398953 + F 100 -14.9 -4.79451 | opp_overlap 2398933, overlap 2398933 TCTTCTCTATTTTGA TAAAAGCAGCC TATT GGCTGCTTTTA TTTTCTATTTCAGAT TERM 2311 2398948 - 2398933 - f 89 -10.4 -4.38712 | opp_overlap 2398928 2398933 TCTATTTTGATAAAA GCAGCC TATT GGCTGC TTTTATTTTCTATTT TERM 2312 2398933 - 2398948 + F 100 -10.4 -5.2894 | opp_overlap 2398933, overlap 2398928 TCTATTTTGATAAAA GCAGCC TATT GGCTGC TTTTATTTTCTATTT TERM 2313 2399637 - 2399608 - g 77 -10.1 -3.55487 | GCATACGAATGATAA CCATGGCCGTTTT TGGG AAAACAGGCATGG CGAATATGGCATGGC TERM 2314 2401007 - 2401020 + G 79 -6.7 -4.71426 | TATCCTGTATTGACC CCTGT GATG ACAGG TTTTGTTGATGCAGC Swoo_1952 2399450 - 2401159 + | 5'-nucleotidase domain-containing protein TERM 2315 2401213 - 2401194 - f 86 -12.2 -2.85297 | opp_overlap 2401194, overlap 2401191 2401189 TTAGTGTAAAGAGTA GGGTAGCT TTCG AGCTACCC TTTTTTATTTTTGAA TERM 2316 2401194 - 2401213 + F 100 -12.2 -5.93252 | opp_overlap 2401191 2401189 2401194 TTAGTGTAAAGAGTA GGGTAGCT TTCG AGCTACCC TTTTTTATTTTTGAA Swoo_1953 2401489 - 2401929 + | heat shock protein Hsp20 TERM 2317 2401995 - 2401979 - T 100 -13.7 -4.51238 | opp_overlap 2401979 TTCAGAAAATAGAAA GGGAGCC TAG GGCTCCC TTTTGCACATGGATG TERM 2318 2401979 - 2401995 + T 100 -13.7 -4.11692 | opp_overlap 2401979 TTCAGAAAATAGAAA GGGAGCC TAG GGCTCCC TTTTGCACATGGATG Swoo_1954 2402771 - 2402277 - | acetolactate synthase, small subunit Swoo_1955 2404627 - 2402771 - | acetolactate synthase, large subunit, biosynthetic type TERM 2319 2404647 - 2404665 + r 73 -6.8 -4.33274 | overlap 2404638 TTGTAAGGTGTGACA TCTGTTTA AAA TGAACAGA TTTTCATCATATAAA Swoo_1956 2406175 - 2404949 - | Bcr/CflA subfamily drug resistance transporter Swoo_1957 2406546 - 2408453 + | alkaline phosphatase TERM 2320 2408463 - 2408478 + F 100 -9 -5.38951 | AAATAACAGGGTTAA GCCACT TTAT AGTGGC TTTTTTATCTACATT Swoo_1958 2408637 - 2409125 + | hypothetical protein TERM 2321 2409139 - 2409112 - T 86 -11.4 -3.794 | opp_overlap 2409112 CTGGAACTTATGAAA CAGTTGCTCAGT AAAA ACTGAGTAACTG TTTATACCATCCACC TERM 2322 2409112 - 2409139 + T 100 -13.6 -3.89346 | opp_overlap 2409112 CTGGAACTTATGAAA CAGTTGCTCAGT AAAA ACTGAGTAACTG TTTATACCATCCACC Swoo_1959 2410007 - 2409171 - | MscS mechanosensitive ion channel TERM 2323 2410283 - 2410293 + H 76 -4 -5.30348 | TAAACCCCTTCAGTT TTCT TCC AGAA TTTTTCTTATTAACT TERM 2324 2411509 - 2411542 + G 100 -12.7 -3.81539 | TAAAGATGATGGCAC CATTCTCTCTGTT AACTTAGC AACAGAGAGAATG TTTAAATATTTAGCT Swoo_1960 2410403 - 2415445 + | multi-sensor hybrid histidine kinase TERM 2325 2415531 - 2415546 + G 77 -3.2 -5.21709 | ATCATTCATGCTTGT GATCGC CTTA GTGGTC TTTTTTAGTGTCAAA TERM 2326 2419352 - 2419336 - g 79 -5.1 -5.07486 | overlap 2419348 GATGTGGAAGAAAAA TCCTCCA AGA CAGAGGA ACCCACAGAGCTTGT Swoo_1961 2415460 - 2420601 + | multi-sensor hybrid histidine kinase Swoo_1962 2420618 - 2421457 + | MCP methyltransferase, CheR-type Swoo_1963 2421450 - 2422049 + | CheB methylesterase Swoo_1964 2422042 - 2423325 + | response regulator receiver sensor signal transduction histidine kinase Swoo_1965 2423469 - 2423873 + | hypothetical protein Swoo_1966 2425288 - 2423924 - | transcriptional regulator Swoo_1967 2425410 - 2426018 + | lysine exporter protein LysE/YggA TERM 2327 2426763 - 2426749 - g 70 -2.8 -4.96848 | GCGTTTAGACAAAAA TGAGCT AAA AGCTTA TCAGGCCTCTGCTAG Swoo_1968 2426066 - 2426869 + | PhzF family phenazine biosynthesis protein Swoo_1969 2427603 - 2426959 - | methyltransferase type 11 Swoo_1970 2428634 - 2427699 - | alpha/beta hydrolase fold TERM 2328 2427813 - 2427826 + g 74 -3.9 -4.93898 | CTTATGTTGATTAAG TAATG GACA CATTA TTTTTATGCTGCTCT TERM 2329 2428826 - 2428809 - R 86 -8.4 -4.55295 | opp_overlap 2428809 TTTGCTATAAATAAA GCGGGT GGATAA ACCCGC TTACGTTAAAGAGGT Swoo_1971 2429190 - 2428849 - | peptidylprolyl isomerase FKBP-type Swoo_1972 2430057 - 2429323 - | glutathione S-transferase domain-containing protein Swoo_1973 2430232 - 2431230 + | rhodanese domain-containing protein TERM 2330 2431322 - 2431336 + F 100 -11.4 -5.78622 | opp_overlap 2431322 CAATGTTGTAAGAAA GCCGTC TTA GACGGC TTTTTTTTGGGCTAA TERM 2331 2431336 - 2431322 - f 90 -11.4 -4.1673 | opp_overlap 2431322 CAATGTTGTAAGAAA GCCGTC TTA GACGGC TTTTTTTTGGGCTAA TERM 2332 2431755 - 2431767 + G 76 -6.2 -4.57474 | opp_overlap 2431754 AGCCTATTTAGATAT GCCC GAAGA GGGC TTTTATGTCCGTTCA Swoo_1974 2431450 - 2432823 + | hypothetical protein TERM 2333 2432914 - 2432899 - g 70 -2.6 -4.946 | overlap 2432900 ATTAAAGATGAAAAA CCTTAA GCTG TTAAGA ACTGCCTCATTGGTG Swoo_1975 2432891 - 2433388 + | CreA family protein TERM 2334 2433395 - 2433419 + F 95 -12.3 -3.89614 | opp_overlap 2433400 2433402, overlap 2433396 GTTAATTAACCTTGA TTGAACACTCA TTA TGAGTGTTCAG TTTCTCCCCATTAGG TERM 2335 2433396 - 2433418 + F 95 -13.6 -2.93447 | opp_overlap 2433400 2433402, overlap 2433395 TTAATTAACCTTGAT TGAACACTCA TTA TGAGTGTTCA GTTTCTCCCCATTAG TERM 2336 2433414 - 2433400 - f 70 -8.6 -3.06831 | opp_overlap 2433396 2433395, overlap 2433402 TTAACCTTGATTGAA CACTCA TTA TGAGTG TTCAGTTTCTCCCCA Swoo_1976 2433456 - 2433986 + | adenylate kinase TERM 2337 2433995 - 2434021 + T 88 -10.9 -4.28254 | opp_overlap 2434000, overlap 2434000 CAGATGACAGACAAT AAAAAGGCCGC TGAAT GCGGCCTTTTG TTTTGAATGTTGCGA TERM 2338 2434000 - 2434016 + T 93 -10.8 -5.11836 | opp_overlap 2434000, overlap 2433995 GACAGACAATAAAAA GGCCGC TGAAT GCGGCC TTTTGTTTTGAATGT TERM 2339 2434016 - 2434000 - T 100 -10.8 -5.27206 | opp_overlap 2434000 2433995 GACAGACAATAAAAA GGCCGC TGAAT GCGGCC TTTTGTTTTGAATGT Swoo_1977 2436106 - 2434040 - | methionyl-tRNA synthetase TERM 2340 2434158 - 2434146 - G 70 -5.5 -4.41353 | TCAGACATACCAAAA CGCAT CTT ACGCG GTGCAAGGTTTGCTA TERM 2341 2435294 - 2435306 + g 76 -6.3 -4.56597 | GTTTAGATCTTCACG TCTGT CAC ACAGA TTTTTGAACGAGCCC TERM 2342 2436998 - 2436982 - g 78 -6.5 -4.62336 | opp_overlap 2436981, overlap 2436985 ACCTTATCTCAAAAA GTACCTG TGA CAGGTGC GGTTGTGGTTACCAC Swoo_1978 2436268 - 2437383 + | ATP-binding Mrp/Nbp35 family protein Swoo_1979 2437396 - 2438031 + | uridine kinase TERM 2343 2438058 - 2438093 + F 71 -9.2 -2.68952 | overlap 2438054 2438055 CCATAAGGTGCCGTG TTATCTAGCCGTTTAA CTTG TTAGGCTGCTAGATAA TCGCTTATGTTTGCA Swoo_1980 2438164 - 2438979 + | aminodeoxychorismate lyase Swoo_1981 2438976 - 2439983 + | aminodeoxychorismate lyase TERM 2344 2440112 - 2440078 - g 76 -7.8 -4.1899 | opp_overlap 2440083 2440106 TGATTTTATCGAAAA GCACACAGGTGCAG TGCCTGT CTGTACCCGTGAGC CAGGCGGAACACCGC Swoo_1982 2439980 - 2440612 + | dTMP kinase Swoo_1983 2440614 - 2441525 + | DNA polymerase III, delta prime subunit Swoo_1984 2441539 - 2441865 + | type IV pilus assembly PilZ TERM 2345 2442382 - 2442372 - g 71 -2.4 -5.03145 | CAACTTTTTAAAAAA TGGC CAC GCCG ATAAGGTAGGTGGCG Swoo_1985 2441944 - 2442732 + | TatD family hydrolase TERM 2346 2442784 - 2442755 - T 100 -12.3 -5.72616 | ATGTAGATAAAAAAA GACCCAAAACTAT TCCG ATTGTTTTGGGTC CAGGGGAATGGCTCT Swoo_1986 2444364 - 2442928 - | RNA methylase Swoo_1987 2444524 - 2445750 + | nucleoside recognition domain-containing protein TERM 2347 2445805 - 2445764 - T 90 -12 -3.42699 | gap 1, opp_overlap 2445777, overlap 2445766 2445768 2445777 AGCGAGTTAGTACAA TACACATAAAAAAGCTGAC AAGAA GTCAGCTTTTTTATGC-TA AGTATTAATGTGTTA TERM 2348 2445804 - 2445766 - T 95 -12.7 -3.28447 | opp_overlap 2445777, overlap 2445764 2445768 2445777 CGAGTTAGTACAATA CACATAAAAAAGCTGAC AAGAA GTCAGCTTTTTTATGCT AAGTATTAATGTGTT TERM 2349 2445802 - 2445768 - T 100 -17.5 -3.2059 | opp_overlap 2445777, overlap 2445766 2445764 2445777 AGTTAGTACAATACA CATAAAAAAGCTGAC AAGAA GTCAGCTTTTTTATG CTAAGTATTAATGTG TERM 2350 2445777 - 2445793 + T 100 -8 -5.31877 | opp_overlap 2445768 2445766 2445764 2445777 AATACACATAAAAAA GCTGAC AAGAA GTCAGC TTTTTTATGCTAAGT TERM 2351 2445793 - 2445777 - T 100 -8 -5.46276 | opp_overlap 2445777, overlap 2445768 2445766 2445764 AATACACATAAAAAA GCTGAC AAGAA GTCAGC TTTTTTATGCTAAGT Swoo_1988 2446711 - 2445818 - | hypothetical protein TERM 2352 2446903 - 2446883 - R 76 -10.5 -2.64155 | opp_overlap 2446882 2446883 2446892 TTTTTTCGAAAGGTA TCACCTTCA GCT TGAAGGCGA GTGTTTTCAAGGTCT Swoo_1989 2447388 - 2447017 - | diacylglycerol kinase TERM 2353 2447927 - 2447939 + G 73 -9.1 -3.55761 | TTTCAGGCTTAGTGA GGCGT AAA ACGCC TTTAGAGAGTGAGTG TERM 2354 2447989 - 2448002 + G 72 -6.7 -4.2679 | GTATTCGATTTTCCC GAGAG CAAA CTCTC TTTTGGTCAACGTTA Swoo_1990 2447605 - 2448471 + | ATP dependent DNA ligase Swoo_1991 2448884 - 2449501 + | ATP-dependent transcription regulator LuxR Swoo_1992 2450295 - 2449531 - | hydrolase TERM 2355 2449645 - 2449670 + g 100 -3.3 -5.89827 | overlap 2449646 CACATCCTTATGATT TTTTTGGAGTG TAAT TGCTCCAAGAG TTTTTTTTGCTCCTT Swoo_1993 2452379 - 2450292 - | phosphoribulokinase/uridine kinase TERM 2356 2451171 - 2451186 + g 70 -7.6 -3.9777 | opp_overlap 2451171 2451170, overlap 2451183 TGAATCACCTGAAAT CCCAAT AGCT ATTGGG TTTGTACCTATTAAA TERM 2357 2451462 - 2451426 - G 74 -3.1 -5.06414 | opp_overlap 2451430, overlap 2451428 TGTTCCGAATAAAAA GTTCGAATACTCATT CTTCTTC AATAAGTACCCGATC AAAAACGGAAGCAAC TERM 2358 2452334 - 2452310 - G 72 -6.6 -4.25104 | CTGGGGCTAGGAAAA CTATTAATAC TATCC GTATCAATAG ACCTGTTTTAAAGTA TERM 2359 2452383 - 2452365 - G 73 -8.9 -3.4647 | opp_overlap 2452364 2452365 2452382, overlap 2452363 TGGAATATTGAAATA GGCTATG TTTTT CATAGCC ATCTTTGTGGATATT Swoo_1994 2452963 - 2452376 - | hypothetical protein Swoo_1995 2453665 - 2452973 - | glycosyl transferase family protein Swoo_1996 2455336 - 2453690 - | hypothetical protein TERM 2360 2454753 - 2454764 + g 76 -3 -5.21709 | opp_overlap 2454762 TCTTGAAGAATCATG GTAT TGAA ATAC TTTTTTAGTATCGAA Swoo_1997 2456360 - 2455347 - | class II aldolase/adducin family protein TERM 2361 2456543 - 2456533 - R 73 -4 -5.16038 | ATACAAGAAAGAAAA TGAA ATA TTCA CTACCCGTGTGAGCA Swoo_1998 2457704 - 2456625 - | hypothetical protein TERM 2362 2457260 - 2457244 - G 70 -6.5 -4.26076 | TGAGTGTCAGTAAAA GAGGAGT CCG ACACCTC AAACCAATCGCTCTG Swoo_1999 2459257 - 2457737 - | radical SAM domain-containing protein Swoo_2000 2460120 - 2459254 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2363 2459557 - 2459543 - G 77 -5 -4.96657 | ACAAAGACAATAAAA CACTGA GAC TCAATG GCTCTAGCGGTTAAT TERM 2364 2460082 - 2460098 + g 74 -3.6 -5.10461 | overlap 2460084 GCTTAGTTTACATTC CAGCTG AATAA CAGCGG TTTTTATTGGCTCAG Swoo_2001 2460826 - 2460110 - | methyltransferase type 11 Swoo_2002 2462202 - 2460856 - | oxygen-independent coproporphyrinogen III oxidase Swoo_2003 2463164 - 2462199 - | ABC transporter related TERM 2365 2462977 - 2462987 + g 79 -6.8 -4.63486 | opp_overlap 2462972 2462968 2462977 CAAATAGTAACTGAA CCTG TAT CAGG TTTTGTTAAGCCAGT Swoo_2004 2463945 - 2463172 - | ABC-2 type transporter TERM 2366 2463768 - 2463754 - G 72 -5.7 -4.45068 | opp_overlap 2463754 ACCGGGAAGAATAAA GGCAA AATAA TTGCC TTCGATAGGGACTAT Swoo_2005 2464784 - 2463945 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Swoo_2006 2465605 - 2464925 - | hypothetical protein Swoo_2007 2466813 - 2465602 - | pyridoxal-dependent decarboxylase Swoo_2008 2467640 - 2466816 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Swoo_2009 2468624 - 2467701 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2367 2467813 - 2467824 + g 71 -4.4 -4.72846 | TAGCTAAAGGGCGCT CTTG ATAG CAAG TTTTTCCATGTGTCG Swoo_2010 2470008 - 2468641 - | coenzyme F390 synthetase-like protein TERM 2368 2470165 - 2470187 + H 71 -3.4 -5.14645 | opp_overlap 2470170 2470171, overlap 2470171 CAGGGGTTCTACATT TATAATGGTG TGG CACCTTTCTA TTTTTATTGCATTGT TERM 2369 2470171 - 2470181 + H 77 -6.8 -4.64423 | opp_overlap 2470170 2470171, overlap 2470165 TTCTACATTTATAAT GGTG TGG CACC TTTCTATTTTTATTG Swoo_2011 2470339 - 2471334 + | hypothetical protein TERM 2370 2471802 - 2471812 + G 72 -6.8 -4.21141 | CTTTAGAAGATATGC CCAC TCA GTGG TTTAATTTCTTCCCC Swoo_2012 2471726 - 2473048 + | pyridoxal-5'-phosphate-dependent protein beta subunit Swoo_2013 2473086 - 2476253 + | molybdopterin oxidoreductase Swoo_2014 2476250 - 2476960 + | methyltransferase type 11 Swoo_2015 2476987 - 2477727 + | hypothetical protein Swoo_2016 2477776 - 2479134 + | coenzyme F390 synthetase-like protein Swoo_2017 2479112 - 2479372 + | hypothetical protein Swoo_2018 2479402 - 2480934 + | hypothetical protein TERM 2371 2481792 - 2481815 + G 71 -4.6 -4.7254 | overlap 2481794 CTGTTCTTTGACCAT GTCTTTATTC CGAT GAATAGAGTC TTTTTACTGGAAAAT Swoo_2019 2480931 - 2482445 + | 4-hydroxyphenylacetate 3-hydroxylase Swoo_2020 2482529 - 2483602 + | secretion protein HlyD family protein Swoo_2021 2483664 - 2484341 + | ABC transporter related TERM 2372 2484886 - 2484897 + G 71 -2.2 -5.15634 | GAAAGATGCGTCTGT CGAT ACGA GTCG TTTTTTACTCCGCTA TERM 2373 2485064 - 2485053 - g 74 -5.8 -4.61873 | overlap 2485047 TGGCAGAAACTAAAA CCTC TAGT GAGG CGGAATATACTAAAG Swoo_2022 2484338 - 2485504 + | hypothetical protein Swoo_2023 2485504 - 2486691 + | hypothetical protein Swoo_2024 2486697 - 2487452 + | DNA alkylation repair enzyme Swoo_2025 2487498 - 2488208 + | hypothetical protein TERM 2374 2488312 - 2488300 - f 77 -6.3 -4.74103 | opp_overlap 2488300 2488300 2488301, overlap 2488301 TTTTGAACTTAAAAA CCTAA CCA TTAGG TTAGTGTTTTTTTAA TERM 2375 2488300 - 2488318 + F 83 -3.9 -5.54264 | gap 1, opp_overlap 2488300 2488301, overlap 2488300 2488301 TTTTGAACTTAAAAA C-CTAACC ATTA GGTTAGTG TTTTTTTAAATCTTT TERM 2376 2488301 - 2488316 + F 80 -7.6 -4.38666 | opp_overlap 2488300 2488301, overlap 2488300 2488300 TTTGAACTTAAAAAC CTAACC ATTA GGTTAG TGTTTTTTTAAATCT Swoo_2026 2488555 - 2491011 + | ABC transporter related Swoo_2027 2491031 - 2492725 + | hypothetical protein Swoo_2028 2492762 - 2493244 + | protein tyrosine phosphatase TERM 2377 2493281 - 2493254 - T 93 -10.6 -5.03994 | opp_overlap 2493254, overlap 2493256 TGTTAGAGATAAAAA GTTCAGCCTAAC TTGA GCTAGGCTGAGC TTTCAGTTGTATATA TERM 2378 2493254 - 2493281 + T 83 -10.6 -3.84394 | opp_overlap 2493254 2493256 TGTTAGAGATAAAAA GTTCAGCCTAAC TTGA GCTAGGCTGAGC TTTCAGTTGTATATA TERM 2379 2493279 - 2493256 - T 81 -11.8 -2.76281 | opp_overlap 2493254, overlap 2493254 TTAGAGATAAAAAGT TCAGCCTAAC TTGA GCTAGGCTGA GCTTTCAGTTGTATA Swoo_2029 2494244 - 2493306 - | GTP-binding protein HSR1-related TERM 2380 2493549 - 2493578 + g 75 -9.3 -3.69354 | ACGGCCAATGGCTTC GAGTAGCTCGATA TCAG TATCGGGCAGCTC TTTAAGCTTGTAACG TERM 2381 2493907 - 2493955 + g 93 -5.5 -5.53288 | gap 1 ATGGTACGAATATCT TTCTCTATCT-TGTCGCGACTT GGTACA AATTTGCGACACAGATCGGGAA TTTTTTTCACTTGGG TERM 2382 2494282 - 2494300 + r 71 -6.8 -4.07568 | CTTAATTGCGTGGAT TTTACCTT GTT AAGGTGAA TTTTAACAAACAAAA TERM 2383 2494312 - 2494335 + r 73 -9.6 -3.02549 | opp_overlap 2494317, overlap 2494317 TGAATTTTAACAAAC AAAAAGCGCC TTTC GGCGCTTTTA TCTAATTGTATTGAT TERM 2384 2494330 - 2494317 - R 100 -9.5 -5.47159 | opp_overlap 2494312 2494317 TTTAACAAACAAAAA GCGCC TTTC GGCGC TTTTATCTAATTGTA TERM 2385 2494317 - 2494330 + r 88 -9.5 -4.63007 | opp_overlap 2494317, overlap 2494312 TTTAACAAACAAAAA GCGCC TTTC GGCGC TTTTATCTAATTGTA Swoo_2030 2495200 - 2494361 - | 2OG-Fe(II) oxygenase TERM 2386 2495415 - 2495397 - R 100 -11.7 -5.26316 | opp_overlap 2495397 TCAGCGCATAAAAAA GGCGAGC TAGTT GCTCGCC TTTCTTGAACACTCT TERM 2387 2495397 - 2495415 + r 90 -11.7 -4.16284 | opp_overlap 2495397 TCAGCGCATAAAAAA GGCGAGC TAGTT GCTCGCC TTTCTTGAACACTCT Swoo_2031 2496999 - 2495443 - | sulphate transporter TERM 2388 2496611 - 2496589 - G 75 -9.2 -3.58522 | ATCAGGAGCTTTAAA TTGTCCTAGC TGT GCTAGGAAAA TGACAATGGCCAAAC TERM 2389 2497113 - 2497094 - R 100 -9.3 -5.33405 | opp_overlap 2497094 GGTATGAAATAAAAA GCCATGC TGTAAT GCATGGC TTCTTGATTATACAG TERM 2390 2497094 - 2497113 + r 79 -9.3 -3.8591 | opp_overlap 2497094 GGTATGAAATAAAAA GCCATGC TGTAAT GCATGGC TTCTTGATTATACAG Swoo_2032 2500569 - 2497141 - | ribonuclease TERM 2391 2497220 - 2497246 + g 71 -5.3 -4.57474 | TTATCGTTTGAGTCA TATTGACGAC-CC ATT GGCGTCG-CAATA TTTTCTCTCACTTCA TERM 2392 2498948 - 2498964 + g 78 -10.9 -3.22106 | overlap 2498943 ACAGCTGGCTTAGCT GCAACAC TTG GTGTTGC TTCAATTGACTTCTT Swoo_2033 2501162 - 2502121 + | RluA family pseudouridine synthase Swoo_2034 2502118 - 2502768 + | HAD family hydrolase TERM 2393 2502790 - 2502821 + T 100 -14.6 -3.58726 | opp_overlap 2502791 2502797, overlap 2502791 2502797 2502820 ATGTGTGACTCATAA AGAAAAAGGCTAGC GCAT GCTAGCCTTTTTCA TTCTCTATCAAGAGG TERM 2394 2502820 - 2502791 - T 100 -18.1 -3.91897 | opp_overlap 2502791 2502790 2502797, overlap 2502797 TGTGTGACTCATAAA GAAAAAGGCTAGC GCAT GCTAGCCTTTTTC ATTCTCTATCAAGAG TERM 2395 2502791 - 2502820 + T 100 -18.1 -2.75022 | opp_overlap 2502791 2502797, overlap 2502790 2502797 TGTGTGACTCATAAA GAAAAAGGCTAGC GCAT GCTAGCCTTTTTC ATTCTCTATCAAGAG TERM 2396 2502814 - 2502797 - T 100 -11.3 -5.38958 | opp_overlap 2502797 2502791 2502790, overlap 2502791 ACTCATAAAGAAAAA GGCTAGC GCAT GCTAGCC TTTTTCATTCTCTAT TERM 2397 2502797 - 2502814 + T 93 -11.3 -4.9755 | opp_overlap 2502791 2502797, overlap 2502791 2502790 ACTCATAAAGAAAAA GGCTAGC GCAT GCTAGCC TTTTTCATTCTCTAT Swoo_2035 2504251 - 2502845 - | diguanylate cyclase with PAS/PAC sensor Swoo_2036 2505036 - 2504437 - | maf protein TERM 2398 2504911 - 2504925 + g 77 -9.2 -3.82208 | opp_overlap 2504858 2504901 CATAACCAGAGCATC GGGGGC TTC GCCCTC TTTAGGTGTTTCATC Swoo_2037 2505356 - 2505880 + | hypothetical protein TERM 2399 2505961 - 2505975 + G 72 -8.6 -3.60525 | CGTTCACACGATTCA TTGAGC ACT GCTCAA TTGTCTGTGGATGCA TERM 2400 2506005 - 2506034 + G 72 -5.7 -4.56775 | gap 1, opp_overlap 2505992, overlap 2506006 2506008 AACGAGTGGTGAACT TCA-CCGTCGTCAC AAC GTGACTGCGGATGG TTTTTACCGCGGCGT Swoo_2038 2505898 - 2506068 + | ribosomal protein L32 TERM 2401 2506138 - 2506168 + G 74 -7.7 -4.0827 | gap 1, overlap 2506099 2506143 ATTATGGCCCCCGCG TCACAGTGCCTGCA ACTT TGCAGGCACT-TCA TTTATATCCCTCTCT TERM 2402 2506143 - 2506164 + G 100 -14.5 -3.65696 | overlap 2506099 2506138 GGCCCCCGCGTCACA GTGCCTGCA ACTT TGCAGGCAC TTCATTTATATCCCT Swoo_2039 2506083 - 2507111 + | fatty acid/phospholipid synthesis protein PlsX TERM 2403 2508017 - 2508049 + G 70 -6.3 -4.18018 | overlap 2508018 TCGAATAAAGCGCGG TCAACTCCTAATGTT AGA AGCATTTGGAGCTGG TTTTGCGTGGGGCAG Swoo_2040 2507124 - 2508083 + | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 2404 2508586 - 2508600 + G 71 -10 -2.73468 | opp_overlap 2508574 2508584, overlap 2508591 2508594 AAGCGTGTGAAGAGG CTTCGC AAG GCGAAG TGGTTAGCCCTGTTA Swoo_2041 2508138 - 2509064 + | malonyl CoA-acyl carrier protein transacylase TERM 2405 2509480 - 2509470 - g 87 -6.8 -5.1861 | opp_overlap 2509450 2509447 CCTATGATGAAAAAA CGTC ATG GACG CATCATTAATATCGG Swoo_2042 2509074 - 2509820 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 2406 2509943 - 2509958 + F 70 -7.6 -3.64703 | AAACTACTCGCAATC TTACGC AAGT GCGTAA TTTGAATAGGAAAGA Swoo_2043 2509980 - 2510213 + | acyl carrier protein TERM 2407 2510225 - 2510258 + F 100 -15.5 -3.89614 | opp_overlap 2510231, overlap 2510231 GTAATCCTGAATTCT TGAAAACAGGCAGCA TTTA TGCTGCCTGTTTTTG TTTCTGGCAATTGGA TERM 2408 2510231 - 2510252 + F 100 -14.5 -5.38054 | opp_overlap 2510231, overlap 2510225 CTGAATTCTTGAAAA CAGGCAGCA TTTA TGCTGCCTG TTTTTGTTTCTGGCA TERM 2409 2510252 - 2510231 - f 100 -14.5 -4.11484 | opp_overlap 2510231 2510225 CTGAATTCTTGAAAA CAGGCAGCA TTTA TGCTGCCTG TTTTTGTTTCTGGCA Swoo_2044 2510402 - 2511640 + | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TERM 2410 2511693 - 2511679 - f 79 -8.5 -4.19678 | opp_overlap 2511679 2511688 TTACATCGGAATAAA GCGCC TGTAT GGCGC TTTTTTTGTGCCAAA TERM 2411 2511679 - 2511693 + F 100 -8.5 -5.60993 | opp_overlap 2511679, overlap 2511688 TTACATCGGAATAAA GCGCC TGTAT GGCGC TTTTTTTGTGCCAAA TERM 2412 2511981 - 2512001 + G 78 -8.3 -4.13341 | overlap 2511984 AGACGTTTACTTTGG CAGCGGCAA GTT TTGCTGTTG TTTGGTTTGCTCTGT TERM 2413 2511984 - 2511998 + G 70 -6.4 -4.17002 | overlap 2511981 CGTTTACTTTGGCAG CGGCAA GTT TTGCTG TTGTTTGGTTTGCTC Swoo_2045 2511848 - 2512216 + | hypothetical protein Swoo_2046 2512303 - 2512779 + | thioesterase superfamily protein TERM 2414 2512806 - 2512821 + F 100 -9 -5.64274 | opp_overlap 2512806 TGTACCCTGTTAAAA GACGCA TTTA TGCGTC TTTTTTTGTGCCTGA TERM 2415 2512821 - 2512806 - f 79 -9 -4.08767 | opp_overlap 2512806 TGTACCCTGTTAAAA GACGCA TTTA TGCGTC TTTTTTTGTGCCTGA TERM 2416 2513114 - 2513127 + G 71 -5.3 -4.46112 | opp_overlap 2513114 GTGAGGCTGCGAAAG GACAA GAGT TTGTC TTTGTTTGCGTGGGA Swoo_2047 2512942 - 2513817 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 2417 2513858 - 2513835 - T 100 -9.6 -5.20783 | opp_overlap 2513838, overlap 2513838 AGCTAAAGACAAAAA GAAGGACTGC ATCT GCAGTCCTTT TCAGTTTGAACTTCA TERM 2418 2513838 - 2513855 + T 88 -11.3 -4.35926 | opp_overlap 2513835 2513838 TAAAGACAAAAAGAA GGACTGC ATCT GCAGTCC TTTTCAGTTTGAACT TERM 2419 2513855 - 2513838 - T 90 -11.3 -4.67478 | opp_overlap 2513838, overlap 2513835 TAAAGACAAAAAGAA GGACTGC ATCT GCAGTCC TTTTCAGTTTGAACT Swoo_2048 2514781 - 2513891 - | cytidine deaminase Swoo_2049 2516280 - 2514868 - | exodeoxyribonuclease I TERM 2420 2515948 - 2515931 - G 78 -5.6 -4.9218 | overlap 2515942 TAGGGATCATAAAAA TTACGG TAAAAC CCGTAA CGGGACACCTCATCA TERM 2421 2515952 - 2515942 - G 76 -8.2 -4.18697 | overlap 2515931 AAAATTACGGTAAAA CCCG TAA CGGG ACACCTCATCATCGA TERM 2422 2516615 - 2516593 - g 74 -7.8 -4.09551 | opp_overlap 2516598 AAAGTCGATAAACAA TGTAAGCTTA GAG TGAGCTTACA TGAGACGACGGCTGA Swoo_2050 2516542 - 2517348 + | hypothetical protein Swoo_2051 2517357 - 2518181 + | rRNA (guanine-N(1)-)-methyltransferase Swoo_2052 2518467 - 2518673 + | cold-shock DNA-binding domain-containing protein TERM 2423 2518720 - 2518741 + T 100 -14.5 -5.4833 | opp_overlap 2518713 2518722 CAAAAGAATTTCTAA GAGCTGCGA TTTA TCGCAGCTC TTTTTTATTGCCTGA TERM 2424 2518739 - 2518722 - T 80 -11.3 -3.08349 | opp_overlap 2518720, overlap 2518713 AAAGAATTTCTAAGA GCTGCGA TTTA TCGCAGC TCTTTTTTATTGCCT TERM 2425 2518897 - 2518879 - T 88 -6.7 -5.26316 | opp_overlap 2518879, overlap 2518887 2518895 TGAGGGCATAAAAAA GCACCAC ATAAA GTGATGC TTTATCAATGCAAAT Swoo_2053 2519817 - 2518918 - | ABC transporter related Swoo_2054 2520626 - 2519814 - | hypothetical protein Swoo_2055 2521443 - 2520784 - | hypothetical protein TERM 2426 2521492 - 2521465 - R 100 -11.4 -5.68039 | opp_overlap 2521465 AAATCCATAAAAAAA GCATGACTTTGT TATA ACAGAGTCATGC TTCTAATCAAAGGAG TERM 2427 2521465 - 2521492 + r 100 -13.6 -3.40403 | opp_overlap 2521465 AAATCCATAAAAAAA GCATGACTTTGT TATA ACAGAGTCATGC TTCTAATCAAAGGAG Swoo_2056 2522404 - 2521565 - | hypothetical protein TERM 2428 2521719 - 2521752 + g 70 -8.9 -3.14963 | opp_overlap 2521709 2521718, overlap 2521711 TTTAAGGGCAGATAG CCGCCAGCTTGTTTA AGCT TAAACATGATGGTGG TTGAGTGCTTATCAA TERM 2429 2522615 - 2522638 + H 72 -2.3 -5.24551 | overlap 2522617 TTGCATAATCATCGT TTGGGGTGT TTAATT GCGCCCCCA TTTTTATTGGTTTAA TERM 2430 2524294 - 2524283 - g 72 -7.2 -4.03234 | TCTGGTCTAGATAAA GCGC CAGA GCGC CGTGCTGTGATGTTA TERM 2431 2524407 - 2524419 + G 73 -6.3 -4.36596 | overlap 2524392 GGAGCGCAGAGAGCC CCTAT TTG ATAGG TTTCTTCCTTGTGGG Swoo_2057 2522801 - 2524714 + | arginine decarboxylase TERM 2432 2524774 - 2524751 - f 78 -11 -2.56715 | opp_overlap 2524753, overlap 2524756 ATTTGTATCAAGTTA GATCAGGCCC TTAG GGGCCTGATA TTGGGTAAGCCTACA TERM 2433 2524753 - 2524772 + F 95 -13.6 -3.08996 | opp_overlap 2524751 2524756 TTGTATCAAGTTAGA TCAGGCCC TTAG GGGCCTGA TATTGGGTAAGCCTA TERM 2434 2524769 - 2524756 - f 71 -9.5 -2.67209 | opp_overlap 2524753, overlap 2524751 TATCAAGTTAGATCA GGCCC TTAG GGGCC TGATATTGGGTAAGC TERM 2435 2524845 - 2524816 - g 95 -8.7 -5.25803 | gap 1 AAGGGTCAGAAAAAA GAGTTG-AGGTGCT AGT ATCACCTACAACTC GCTCCTTACGTCTTC Swoo_2058 2524791 - 2525720 + | adenosylmethionine decarboxylase TERM 2436 2526117 - 2526127 + G 74 -6.8 -4.39696 | CGATGCTCAGTTTCG GTGG CGA CCAC TTTGTTACTTTACCG Swoo_2059 2525750 - 2526679 + | agmatinase Swoo_2060 2526713 - 2527354 + | pyridoxamine 5'-phosphate oxidase TERM 2437 2527484 - 2527503 + F 100 -12.2 -5.46657 | opp_overlap 2527484 TTGATTGGTATAAAA GGGACTGT GAAT ACAGTCCC TTTTTTATTGGGATG TERM 2438 2527503 - 2527484 - f 100 -12.2 -4.38712 | opp_overlap 2527484 TTGATTGGTATAAAA GGGACTGT GAAT ACAGTCCC TTTTTTATTGGGATG TERM 2439 2528429 - 2528449 + G 71 -9.7 -3.06815 | TCCTAAGTTGGAGCT CCAGGCGAA AGT TTCACCTGG TGTATTAGCCAAGAT Swoo_2061 2528145 - 2528720 + | YceI family protein TERM 2440 2528796 - 2528780 - f 80 -2.9 -5.63857 | overlap 2528781 2528791 AAAAAGTTAAAAAAA GGCCAAT TAA ACTGGCT AATGAGCATGGCTTC TERM 2441 2528800 - 2528821 + F 76 -10.2 -3.19463 | opp_overlap 2528791 2528802 ATTAAACTGGCTAAT GAGCATGG CTTCAA CCATGCTC TTAATGAGTAGTAGC Swoo_2062 2528849 - 2529199 + | hypothetical protein TERM 2442 2529708 - 2529688 - g 72 -9.7 -3.14463 | opp_overlap 2529687 AAGTTTTTGCACGAA GTGAGGCTT CTG AAGCCACAC ATTGGATGAAAGAGT Swoo_2063 2529363 - 2529728 + | hypothetical protein TERM 2443 2529858 - 2529876 + F 100 -10.3 -5.56573 | opp_overlap 2529856 2529852 AAAGAAAATTTAATC TGCCGAC TCTGT GTCGGCA TTTTTATTTGTTTGT Swoo_2064 2529928 - 2530797 + | hypothetical protein TERM 2444 2530822 - 2530857 + T 100 -14.4 -3.44686 | opp_overlap 2530812 2530826 2530833, overlap 2530826 2530833 AATCATTATTTCTTG TAAATAAAAAAGATGC TGCG GCATCTTTTTTATTTG TGTTGTTAACTTGAG TERM 2445 2530826 - 2530853 + T 100 -13 -4.34866 | opp_overlap 2530812 2530826 2530833, overlap 2530822 2530833 ATTATTTCTTGTAAA TAAAAAAGATGC TGCG GCATCTTTTTTA TTTGTGTTGTTAACT TERM 2446 2530853 - 2530826 - T 95 -13 -3.5393 | opp_overlap 2530826 2530822 2530833, overlap 2530812 2530833 ATTATTTCTTGTAAA TAAAAAAGATGC TGCG GCATCTTTTTTA TTTGTGTTGTTAACT TERM 2447 2530833 - 2530846 + T 100 -6.7 -5.7827 | opp_overlap 2530826 2530833, overlap 2530826 2530822 CTTGTAAATAAAAAA GATGC TGCG GCATC TTTTTTATTTGTGTT TERM 2448 2530846 - 2530833 - T 90 -6.7 -5.63517 | opp_overlap 2530833 2530826 2530822, overlap 2530826 CTTGTAAATAAAAAA GATGC TGCG GCATC TTTTTTATTTGTGTT Swoo_2065 2533491 - 2530873 - | putative PAS/PAC sensor protein TERM 2449 2532251 - 2532237 - G 75 -5 -4.74103 | CCTTTAAGGCAAAAA CCATAC TTG ATATGG GGCGAATAAAGAGTC Swoo_2066 2533839 - 2534822 + | phenylalanyl-tRNA synthetase, alpha subunit Swoo_2067 2534838 - 2537225 + | phenylalanyl-tRNA synthetase, beta subunit Swoo_2068 2537230 - 2537523 + | integration host factor, alpha subunit TERM 2450 2537552 - 2537568 + F 100 -12.3 -4.88295 | opp_overlap 2537545 TAGTTAAATGTTAAG GCCACTC TAG GAGTGGC TTTTTCAGTTTGTTT Swoo_2069 2537605 - 2538540 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2451 2538554 - 2538580 + F 100 -5.9 -5.67283 | gap 1 AGGTTTTTCTGAAAA GGTGAGTTTAGC TAAC GC-GGACTCACC TTTTTTATTTCCGTT Swoo_2070 2538793 - 2539824 + | hypothetical protein Swoo_2071 2540445 - 2539903 - | hypothetical protein TERM 2452 2540699 - 2540676 - R 100 -15.4 -3.29263 | opp_overlap 2540678 ACACTCCTTGCAGAA CAGCCCACTT ATAA AAGTGGGCTG TAGTAATACAAGTTA TERM 2453 2540678 - 2540697 + r 86 -12.2 -2.82635 | opp_overlap 2540676 ACTCCTTGCAGAACA GCCCACTT ATAA AAGTGGGC TGTAGTAATACAAGT Swoo_2072 2541728 - 2540712 - | hypothetical protein Swoo_2073 2542077 - 2543297 + | PqiA family integral membrane protein TERM 2454 2544044 - 2544074 + G 100 -12.6 -4.03611 | ATGTTCCAGATGGGA TGCCGCTAGGTGAT AAG ATCACCGAGCGGGA TTATTTCGATATTTT TERM 2455 2544693 - 2544670 - g 72 -8.2 -3.87373 | CAGAGTTTGGATAAA CTGCTTATCA GTGC TGATCAGCAG GAGCTTATTAGGGAG Swoo_2074 2543275 - 2544927 + | hypothetical protein Swoo_2075 2544924 - 2545499 + | hypothetical protein Swoo_2076 2546826 - 2545546 - | major facilitator transporter TERM 2456 2545731 - 2545721 - G 72 -3.2 -4.94992 | CCAAATTCATAAAAA GAAG CGG CTCC AAAGTAAGCGCCTCG TERM 2457 2547661 - 2547677 + H 75 -2.3 -5.44721 | overlap 2547654 AGGGTAAAGTGGATA TATTCTA CTT TGGGATA TTTTTTTAGCATAAT TERM 2458 2547844 - 2547854 + H 75 -3.2 -5.28176 | CCCCTATAGTATGAA CTCT TTA GGAG TTTTTTATGAATAGG TERM 2459 2548401 - 2548420 + G 73 -6.4 -4.31329 | opp_overlap 2548402, overlap 2548402 TGCTATCTTTCATAA AGATGTCG GCGC CGACATCA TTTTACCATTTTTAC TERM 2460 2548402 - 2548419 + G 72 -9.9 -3.17713 | opp_overlap 2548402, overlap 2548401 GCTATCTTTCATAAA GATGTCG GCGC CGACATC ATTTTACCATTTTTA TERM 2461 2548419 - 2548402 - g 81 -9.9 -3.86897 | opp_overlap 2548402 2548401 GCTATCTTTCATAAA GATGTCG GCGC CGACATC ATTTTACCATTTTTA Swoo_2077 2547931 - 2548512 + | hypothetical protein TERM 2462 2548543 - 2548520 - T 89 -6 -5.52096 | opp_overlap 2548520 AAAGGTAATAAAAAA GCCGTAACTT TAAA ATATTACGGC TTTCGATCATCTAGC Swoo_2078 2549674 - 2548568 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2463 2549756 - 2549772 + H 70 -2.9 -5.0925 | TTTTAGCGGGGGAAT CGCAGTT GCG AACAGTG TTTTTCATTTTACAA Swoo_2079 2550083 - 2550871 + | extracellular solute-binding protein TERM 2464 2550900 - 2550912 + T 72 -6.3 -4.42748 | TACATCTGATAGCGC CTGAT TAT ATCAG TTATTTTTCCACTAC Swoo_2080 2551669 - 2550884 - | amino acid ABC transporter TERM 2465 2551740 - 2551769 + r 95 -12.3 -3.95073 | opp_overlap 2551741 2551747, overlap 2551741 2551743 2551747 TATTAGGATTTAAAC AGATAAAGCCTCA TTAA TGAGGCTTTATCA TTTCTAACTGTACAA TERM 2466 2551768 - 2551741 - R 100 -15.8 -3.42663 | opp_overlap 2551740 2551741 2551743 2551747, overlap 2551747 ATTAGGATTTAAACA GATAAAGCCTCA TTAA TGAGGCTTTATC ATTTCTAACTGTACA TERM 2467 2551741 - 2551768 + r 100 -15.8 -2.96722 | opp_overlap 2551741 2551747, overlap 2551740 2551743 2551747 ATTAGGATTTAAACA GATAAAGCCTCA TTAA TGAGGCTTTATC ATTTCTAACTGTACA TERM 2468 2551743 - 2551766 + r 91 -12.6 -3.03459 | opp_overlap 2551741 2551747, overlap 2551741 2551740 2551747 TAGGATTTAAACAGA TAAAGCCTCA TTAA TGAGGCTTTA TCATTTCTAACTGTA TERM 2469 2551762 - 2551747 - R 83 -9 -4.28488 | opp_overlap 2551743 2551741 2551740 2551747, overlap 2551741 ATTTAAACAGATAAA GCCTCA TTAA TGAGGC TTTATCATTTCTAAC TERM 2470 2551747 - 2551762 + r 79 -9 -4.17701 | opp_overlap 2551747 2551741, overlap 2551743 2551741 2551740 ATTTAAACAGATAAA GCCTCA TTAA TGAGGC TTTATCATTTCTAAC Swoo_2081 2552424 - 2551792 - | phosphoribosyl-ATP diphosphatase Swoo_2082 2553243 - 2552470 - | imidazoleglycerol phosphate synthase, cyclase subunit Swoo_2083 2554557 - 2553529 - | LacI family transcription regulator TERM 2471 2554168 - 2554182 + g 87 -6.4 -5.21709 | opp_overlap 2554168 GGATAAAGCGATTAA CTCATC ATC GGTGAG TTTTTTACTGTGAAC TERM 2472 2555660 - 2555683 + G 71 -9.6 -3.06815 | GACGGATTTGAATGG TCAGCAAGAG AGTT CACTTGCTGA TATATTGCAGCAGAT Swoo_2084 2554902 - 2555975 + | galactose-1-phosphate uridylyltransferase Swoo_2085 2556021 - 2557178 + | galactokinase TERM 2473 2558272 - 2558292 + G 70 -6.9 -4.04927 | TTAAAGGGCTAGTGT TTGCAGC TTTGGTT GCTGCAA TTGTTTCATCCTTAG Swoo_2086 2557275 - 2558837 + | SSS family solute/sodium (Na+) symporter TERM 2474 2558876 - 2558910 + T 100 -14.5 -5.18561 | GTATTAAGATTTGAT TCACTCCAGCTATAT TTTAC ATAGAGCTGGAGTGA TTTTTTAGCTATTTG Swoo_2087 2559652 - 2558915 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 2475 2559309 - 2559327 + g 73 -5.2 -4.64861 | opp_overlap 2559309 CCATATTTTTCAAAC CAGCTCTG TAC TAGCGCTG TTTCTTTTACGGCAA Swoo_2088 2560302 - 2559652 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Swoo_2089 2561431 - 2560352 - | histidinol-phosphatase Swoo_2090 2562541 - 2561495 - | histidinol-phosphate aminotransferase Swoo_2091 2563839 - 2562538 - | histidinol dehydrogenase TERM 2476 2563268 - 2563284 + g 80 -10.9 -3.29144 | opp_overlap 2563268 2563267 GTTTCGGTGCCAAAG GCCATTG CTG CAATGGC TTGTGCACCGCCTAC TERM 2477 2563284 - 2563268 - G 74 -10.9 -2.71712 | opp_overlap 2563268, overlap 2563267 GTTTCGGTGCCAAAG GCCATTG CTG CAATGGC TTGTGCACCGCCTAC TERM 2478 2563639 - 2563663 + g 70 -7.1 -3.89346 | overlap 2563641 TGCTTCTATCTCATC CACGCAGAGCT TTA AGCTCTGAGTC TTTATCCCATCAAAC TERM 2479 2563641 - 2563661 + g 75 -9.7 -3.53733 | overlap 2563639 CTTCTATCTCATCCA CGCAGAGCT TTA AGCTCTGAG TCTTTATCCCATCAA Swoo_2092 2564742 - 2563843 - | ATP phosphoribosyltransferase TERM 2480 2564209 - 2564199 - G 72 -8.2 -3.87815 | CTTCAGTTTCATAAA GGCC ATT GGCC TCTAACGTGGCGCCT TERM 2481 2564835 - 2564866 + r 74 -10.2 -2.64872 | opp_overlap 2564840, overlap 2564840 AGATAAGCTAAAACG AAAAACCCCCGGAA TTCC TTCCAGGGGTTTTG ATATTCTTGAATCAA TERM 2482 2564840 - 2564861 + r 89 -10.1 -4.49937 | opp_overlap 2564840, overlap 2564835 AGCTAAAACGAAAAA CCCCCGGAA TTCC TTCCAGGGG TTTTGATATTCTTGA TERM 2483 2564861 - 2564840 - R 100 -12.3 -5.10154 | opp_overlap 2564840 2564835 AGCTAAAACGAAAAA CCCCCGGAA TTCC TTCCAGGGG TTTTGATATTCTTGA TERM 2484 2564909 - 2564882 - R 70 -8.5 -3.34522 | gap 1, overlap 2564896 ATATTCTTGAATCAA CCGCCAGAAGGA TAGTC TCCTTC-GGCAG TGAGCTTCCGAAGGC TERM 2485 2565003 - 2565016 + r 75 -6.7 -4.40358 | opp_overlap 2565002 CATCGAGTAAATAGG GAGTC TGGT GACTC TTTTATAAAATGGAT Swoo_2093 2566088 - 2565225 - | AraC family transcriptional regulator TERM 2486 2565333 - 2565349 + g 70 -6.5 -4.20932 | opp_overlap 2565336, overlap 2565336 AAGGGCGATATCTGA CAAGCTC TGT GCGCTTG TTTTAAGTCGGTGTT TERM 2487 2565647 - 2565659 + g 70 -9.1 -3.14671 | overlap 2565645 GAGCAAGGTGACTTT GGCTG TGC CAGCC TATATTGGCTATTTG TERM 2488 2566513 - 2566538 + G 79 -9.7 -3.74693 | overlap 2566498 CCAGCGGTTTGACCG CAGTGGTGATG TCGA CAGCACCGCTG TTTAATGCACTACAC Swoo_2094 2566236 - 2567165 + | hypothetical protein Swoo_2095 2567247 - 2567453 + | cold-shock DNA-binding domain-containing protein TERM 2489 2567508 - 2567490 - f 100 -13.2 -3.57783 | opp_overlap 2567490 TCAGCACAATGATAA GCCAGTGA AGT TCACTGGC TTTGTTATATCTATC TERM 2490 2567490 - 2567508 + F 100 -13.2 -4.4458 | opp_overlap 2567490 TCAGCACAATGATAA GCCAGTGA AGT TCACTGGC TTTGTTATATCTATC Swoo_2096 2567612 - 2569072 + | glutathione synthase TERM 2491 2569114 - 2569096 - f 72 -9.6 -2.78679 | overlap 2569095 2569098 GTGCTGTACCTAAAC GACCTCAA GAG TTGAGGCC TGCATCTTTAAAGTG TERM 2492 2570179 - 2570202 + G 73 -10.4 -3.06737 | gap 1, opp_overlap 2570187, overlap 2570184 2570198 TGGCGACGCTTGATG GGAGAGCAGCA GAT TGCTGCT-TCC TCTTGGGAGTTAATC TERM 2493 2570184 - 2570198 + G 76 -10 -3.37017 | opp_overlap 2570187, overlap 2570179 ACGCTTGATGGGAGA GCAGCA GAT TGCTGC TTCCTCTTGGGAGTT TERM 2494 2570957 - 2570983 + G 74 -10.3 -3.24232 | gap 1, overlap 2570955 CCGACAGTATCTCCC GTGATGGCAAAG ACCC CTTTGCCA-CAC TCTCTTTGCCACAAG Swoo_2097 2569252 - 2571186 + | helicase c2 TERM 2495 2571226 - 2571184 - T 100 -22.4 -4.94487 | opp_overlap 2571187 2571192, overlap 2571187 2571192 TTAGAAAAGATAAAA TAATAAAAGAGGGCGAGATT AAT AATCTCGCCCTCTTTTATTT CATTGGACTCGCTAT TERM 2496 2571223 - 2571187 - T 100 -24.1 -4.52747 | opp_overlap 2571187 2571192, overlap 2571184 2571192 GAAAAGATAAAATAA TAAAAGAGGGCGAGATT AAT AATCTCGCCCTCTTTTA TTTCATTGGACTCGC TERM 2497 2571187 - 2571223 + T 100 -24.1 -3.91911 | opp_overlap 2571187 2571184 2571192, overlap 2571192 GAAAAGATAAAATAA TAAAAGAGGGCGAGATT AAT AATCTCGCCCTCTTTTA TTTCATTGGACTCGC TERM 2498 2571192 - 2571218 + T 100 -19.6 -4.99947 | opp_overlap 2571187 2571184 2571192, overlap 2571187 GATAAAATAATAAAA GAGGGCGAGATT AAT AATCTCGCCCTC TTTTATTTCATTGGA TERM 2499 2571218 - 2571192 - T 100 -19.6 -5.12916 | opp_overlap 2571192 2571187, overlap 2571187 2571184 GATAAAATAATAAAA GAGGGCGAGATT AAT AATCTCGCCCTC TTTTATTTCATTGGA Swoo_2098 2572567 - 2571266 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2500 2573161 - 2573151 - g 86 -2.4 -5.626 | TATGTTAGAAAAAAA CCTC AAG GTGG AGTTGCTCGATCGCA Swoo_2099 2573011 - 2573985 + | LysR family transcriptional regulator TERM 2501 2574712 - 2574722 + G 75 -4.6 -4.91109 | opp_overlap 2574684, overlap 2574684 2574683 CTTGCTAGCGGTTAT CGCC ATC GGTG TTTTTATGGTGGGGA TERM 2502 2575415 - 2575404 - g 70 -5.8 -4.37658 | opp_overlap 2575412 AACGCCCCTATAAAA CACC TGGT GGTG TGCTGACATCTTCTA Swoo_2100 2574161 - 2575621 + | ethanolamine transproter TERM 2503 2576587 - 2576577 - g 70 -5.4 -4.30719 | TCGCTGCAGAATAAA GATG GCA CATC GGCGTTTTATGACCC Swoo_2101 2575773 - 2577140 + | glutamine synthetase catalytic region Swoo_2102 2577195 - 2578610 + | aldehyde dehydrogenase TERM 2504 2578869 - 2578859 - g 72 -8.2 -3.94746 | TGATATTCAAGGAAA CCCC ACT GGGG ACAATGTCCGTGCAG TERM 2505 2579195 - 2579212 + G 77 -9.9 -3.6959 | CACTGTTTTACTCGA CCCAAAG CTCA CTTTGGG TTTGCCTCCTCCTAT Swoo_2103 2578644 - 2579810 + | iron-containing alcohol dehydrogenase TERM 2506 2579822 - 2579855 + F 72 -4.7 -4.76274 | TTAGCGAGTTGATAT TTGAGAGTCAGTTTA TGGA TAGTTTGATTCTCAA TTTTGTCTTAATTTC TERM 2507 2580365 - 2580377 + G 74 -4.1 -4.97402 | opp_overlap 2580356 AGGGAACAGAGATCA TCGCT GCC AGTGA TTTTTGTCCCTTTTA Swoo_2104 2579887 - 2580585 + | glutamine amidotransferase class-I Swoo_2105 2580813 - 2581532 + | peptidase M22 glycoprotease Swoo_2106 2581625 - 2582005 + | hypothetical protein Swoo_2107 2581998 - 2582702 + | hypothetical protein Swoo_2108 2583133 - 2583963 + | hypothetical protein TERM 2508 2584372 - 2584394 + G 75 -9.2 -3.59995 | opp_overlap 2584370, overlap 2584371 2584375 AGAGTCGGAAAATTG GTACTTATCG AGG CGATAAGTCC TCTTTATGAGTTTGC TERM 2509 2584375 - 2584391 + G 70 -9.5 -2.90913 | opp_overlap 2584370, overlap 2584372 2584371 GTCGGAAAATTGGTA CTTATCG AGG CGATAAG TCCTCTTTATGAGTT Swoo_2109 2583991 - 2584875 + | alpha/beta hydrolase fold TERM 2510 2585302 - 2585320 + F 86 -8.2 -4.57073 | TAAGTCAGTGATTTT GCTTGTTG TTT TAACAAGC TTTTTACAGAGAGTA Swoo_2110 2585378 - 2587051 + | AMP-dependent synthetase and ligase TERM 2511 2587104 - 2587121 + F 93 -9.8 -5.06052 | CATTTAAACCTCTAA GCCGGC CTTGAT GCCGGC TTTTCTATTTTTTAC Swoo_2111 2587163 - 2588272 + | ribonuclease D TERM 2512 2588309 - 2588337 + T 95 -13.2 -2.89668 | opp_overlap 2588309 2588314, overlap 2588314 TTATTAAGCAAACAA CTAAACCCCGAC TTCAT GTCGGGGTTTTG TATATCACACTCTTA TERM 2513 2588337 - 2588309 - T 100 -13.2 -4.10437 | opp_overlap 2588309 2588314, overlap 2588314 TTATTAAGCAAACAA CTAAACCCCGAC TTCAT GTCGGGGTTTTG TATATCACACTCTTA TERM 2514 2588314 - 2588332 + T 100 -11.7 -4.60797 | opp_overlap 2588309 2588314, overlap 2588309 AAGCAAACAACTAAA CCCCGAC TTCAT GTCGGGG TTTTGTATATCACAC TERM 2515 2588332 - 2588314 - T 90 -11.7 -4.17274 | opp_overlap 2588314 2588309, overlap 2588309 AAGCAAACAACTAAA CCCCGAC TTCAT GTCGGGG TTTTGTATATCACAC Swoo_2112 2588610 - 2588350 - | cell division topological specificity factor MinE Swoo_2113 2589422 - 2588613 - | septum site-determining protein MinD Swoo_2114 2590114 - 2589449 - | septum site-determining protein MinC TERM 2516 2590002 - 2589992 - G 83 -5.4 -5.28176 | CGCACCGAGAAAAAA TTGC GGA GCAA TAGCTAATTTGCCGT Swoo_2115 2590237 - 2590518 + | hypothetical protein Swoo_2116 2590554 - 2591543 + | lytic murein transglycosylase TERM 2517 2591637 - 2591618 - f 75 -7.8 -4.15833 | opp_overlap 2591620, overlap 2591620 ATGACTAGTGTAAAA TAGCCCGT GAGA ACGGGCTT TTTTGTAGATTAAAA TERM 2518 2591635 - 2591620 - f 81 -10.4 -3.67634 | opp_overlap 2591620, overlap 2591618 GACTAGTGTAAAATA GCCCGT GAGA ACGGGC TTTTTTGTAGATTAA TERM 2519 2591620 - 2591635 + F 100 -10.4 -5.31456 | opp_overlap 2591620 2591618 GACTAGTGTAAAATA GCCCGT GAGA ACGGGC TTTTTTGTAGATTAA Swoo_2117 2591656 - 2592096 + | hypothetical protein Swoo_2118 2593303 - 2592134 - | beta-lactamase TERM 2520 2593162 - 2593149 - G 72 -5.9 -4.51097 | TCAATGATGACAAAA GCGCC GCCT GGCAC GCCATTTTTCTTTAG Swoo_2119 2593579 - 2594247 + | peptidase S51 dipeptidase E TERM 2521 2594256 - 2594308 + T 75 -6.4 -4.47786 | gap 1, opp_overlap 2594258 2594270, overlap 2594258 2594259 2594262 GTGCTAATTTGTAGG AATCGC-GGATTAAACCTAGGGAGT TAAA ATCCCCTAGGTTTAATCCTGAGTTA TTTATTTCAATGCTT TERM 2522 2594304 - 2594258 - T 80 -11.1 -3.16742 | gap 1, opp_overlap 2594258 2594256 2594259 2594262, overlap 2594270 GCTAATTTGTAGGAA TCGCGGATTAAACCTAGGGAGT TAAA ATCCCCTAGGTTTAATCCT-GA GTTATTTATTTCAAT TERM 2523 2594258 - 2594304 + T 95 -13.3 -3.19486 | gap 1, opp_overlap 2594258 2594270, overlap 2594256 2594259 2594262 GCTAATTTGTAGGAA TCGCGGATTAAACCTAGGGAGT TAAA ATCCCCTAGGTTTAATCC-TGA GTTATTTATTTCAAT TERM 2524 2594259 - 2594305 + T 100 -12.5 -4.34285 | gap 1, opp_overlap 2594258 2594270, overlap 2594258 2594256 2594262 CTAATTTGTAGGAAT CGC-GGATTAAACCTAGGGAGT TAAA ATCCCCTAGGTTTAATCCTGAG TTATTTATTTCAATG TERM 2525 2594262 - 2594301 + T 100 -17.4 -2.77593 | opp_overlap 2594258 2594270, overlap 2594258 2594259 2594256 ATTTGTAGGAATCGC GGATTAAACCTAGGGAGT TAAA ATCCCCTAGGTTTAATCC TGAGTTATTTATTTC TERM 2526 2594293 - 2594270 - T 70 -7.4 -3.737 | opp_overlap 2594262 2594258 2594259 2594256, overlap 2594258 GAATCGCGGATTAAA CCTAGGGAGT TAAA ATCCCCTAGG TTTAATCCTGAGTTA Swoo_2120 2595485 - 2594310 - | cystathionine beta-lyase TERM 2527 2595377 - 2595397 + g 86 -12.7 -3.24747 | opp_overlap 2595368 CAAAACGCATCTCCT CCATGGTAT CGA ATACCATGG TTGATGCTCTAAAAA Swoo_2121 2597762 - 2595585 - | integral membrane sensor signal transduction histidine kinase Swoo_2122 2598527 - 2597832 - | two component transcriptional regulator TERM 2528 2598165 - 2598193 + g 71 -9.5 -3.05384 | TCCCTGCAGTTCGGC TCGCCTGAACAGC GCG GCTAGTCGGGCGA TTAAGTGAGGAAAGC Swoo_2123 2598827 - 2599543 + | OmpA/MotB domain-containing protein TERM 2529 2600025 - 2600012 - g 81 -2.3 -5.49809 | GAAATGGCAAAAAAA GCAGG TAAA CGTGC CAGTTTAGTCTCTCA Swoo_2124 2599571 - 2601790 + | cell wall anchor domain-containing protein Swoo_2125 2601783 - 2602388 + | sortase family protein Swoo_2126 2603410 - 2602385 - | diguanylate cyclase TERM 2530 2603546 - 2603588 + r 89 -5.9 -5.5604 | gap 1, opp_overlap 2603553 2603558, overlap 2603553 2603558 GGAAGCTAGCAGGTA TAA-AAAATAAAACCAGAAC TTTT GTTCTGGTTTTATTAAATTA TTTTTTATTAGTTAA TERM 2531 2603553 - 2603580 + r 100 -14.4 -3.43246 | opp_overlap 2603553 2603558, overlap 2603546 2603558 AGCAGGTATAAAAAA TAAAACCAGAAC TTTT GTTCTGGTTTTA TTAAATTATTTTTTA TERM 2532 2603580 - 2603553 - R 100 -14.4 -5.28778 | opp_overlap 2603553 2603546 2603558, overlap 2603558 AGCAGGTATAAAAAA TAAAACCAGAAC TTTT GTTCTGGTTTTA TTAAATTATTTTTTA TERM 2533 2603558 - 2603575 + r 91 -9.9 -4.74539 | opp_overlap 2603553 2603558, overlap 2603553 2603546 GTATAAAAAATAAAA CCAGAAC TTTT GTTCTGG TTTTATTAAATTATT TERM 2534 2603575 - 2603558 - R 100 -9.9 -5.49579 | opp_overlap 2603558 2603553 2603546, overlap 2603553 GTATAAAAAATAAAA CCAGAAC TTTT GTTCTGG TTTTATTAAATTATT Swoo_2127 2606230 - 2603606 - | hypothetical protein Swoo_2128 2606849 - 2606199 - | paraquat-inducible protein A TERM 2535 2606325 - 2606356 + gr 82 -11.6 -3.03124 | gap 1 AAATGCAGTGGCGGC TGGGGCGG-GCTTGG CAT CCAAGAGCTGCCCCA TATTAACCAGTGCGA TERM 2536 2606409 - 2606391 - GR 72 -7.4 -4.02334 | opp_overlap 2606378, overlap 2606393 2606402 GATGGATATGACAAA TAGGTCCA ACA TGGACCAA CGTCCTATCCATTCA TERM 2537 2606407 - 2606393 - GR 80 -10 -3.60104 | opp_overlap 2606378, overlap 2606391 2606402 TGGATATGACAAATA GGTCCA ACA TGGACC AACGTCCTATCCATT TERM 2538 2606677 - 2606701 + gr 70 -2.8 -5.02074 | gap 1, overlap 2606697 GGAATTAACAAGATG GCTGCGGTGAT AAGT AACGCC-CAGC TTTTTTGCAAGCTAG Swoo_2129 2607468 - 2606842 - | paraquat-inducible protein A TERM 2539 2607937 - 2607927 - g 72 -6.8 -4.26903 | opp_overlap 2607927 TTCAGTTTACTAAAA GGTG TGG CACC TTCTGCAGCAAAAAC TERM 2540 2607979 - 2607963 - g 73 -3 -5.08011 | gap 1, overlap 2607964 2607965 AAAACCGCTAAAAAA TC-GCCT AAAA AGGCAGA AACTAAAAAATAAAG Swoo_2130 2607708 - 2607992 + | YebG family protein Swoo_2131 2608010 - 2608468 + | putative GAF sensor protein Swoo_2132 2608744 - 2609388 + | ProQ activator of osmoprotectant transporter ProP TERM 2541 2609782 - 2609792 + G 74 -6.8 -4.41895 | overlap 2609790 CTGGTGCAGAAGCGT CGCT ATG AGCG TTTTGCTTACGCCTT TERM 2542 2610141 - 2610167 + G 71 -9.4 -3.07895 | opp_overlap 2610144, overlap 2610144 TTTCCAGATGGAGAT GAACCTAAGCCT TGA AGGCATAGGTGC TGTGTTACAGATGGA TERM 2543 2610164 - 2610144 - g 74 -9.7 -3.28912 | opp_overlap 2610141 2610144 CCAGATGGAGATGAA CCTAAGCCT TGA AGGCATAGG TGCTGTGTTACAGAT Swoo_2133 2609419 - 2611491 + | carboxyl-terminal protease TERM 2544 2611513 - 2611527 + F 100 -11.4 -5.80817 | opp_overlap 2611513 AGATTCAGATAAAAA CGCGCT ATA AGCGCG TTTTTTTATATTAAA TERM 2545 2611527 - 2611513 - f 100 -11.4 -4.99638 | opp_overlap 2611513 AGATTCAGATAAAAA CGCGCT ATA AGCGCG TTTTTTTATATTAAA TERM 2546 2612518 - 2612545 + G 90 -9.2 -4.59773 | opp_overlap 2612525, overlap 2612520 TGCCGTGATTGGTTC CAGTTAAGCCTT AAAG AGGGCTTAACCG TTTTTAGAGATCAAG TERM 2547 2612520 - 2612543 + G 70 -10.4 -2.61004 | opp_overlap 2612525, overlap 2612518 CCGTGATTGGTTCCA GTTAAGCCTT AAAG AGGGCTTAAC CGTTTTTAGAGATCA TERM 2548 2613837 - 2613849 + G 72 -7.7 -3.89695 | ATTAGAGAAGCTTAC TGAGC ACA GCTCA TTCTCTTTCTCAAAC Swoo_2134 2611564 - 2614143 + | aminopeptidase N TERM 2549 2614178 - 2614209 + F 89 -10.3 -4.4648 | opp_overlap 2614181, overlap 2614181 GTTTTTTACTGTTAT AAACGCCAATGAT GCCACA ATCATTGGCGTTA TTTTCTGATAAGAAT TERM 2550 2614206 - 2614181 - f 95 -12 -3.87815 | opp_overlap 2614178 2614181 TTTTACTGTTATAAA CGCCAATGAT GCCACA ATCATTGGCG TTATTTTCTGATAAG TERM 2551 2614181 - 2614206 + F 95 -12 -4.35042 | opp_overlap 2614181, overlap 2614178 TTTTACTGTTATAAA CGCCAATGAT GCCACA ATCATTGGCG TTATTTTCTGATAAG TERM 2552 2614343 - 2614329 - g 70 -10 -2.62043 | overlap 2614325 GTGATAATGAAGGCA GGATCC TAT GGATCC ATGGCAGACACTTTC Swoo_2135 2614223 - 2614447 + | hypothetical protein TERM 2553 2615277 - 2615327 + G 74 -7.9 -4.05816 | gap 1, opp_overlap 2615282, overlap 2615281 ATCCCTGTGCGGATT CAAAAGCATC-AGAAGTTCAATGT AAAG ACATTCGACTTTTAGATGCATTTG TTTATGGTGATTTTG Swoo_2136 2614778 - 2616826 + | hypothetical protein Swoo_2137 2616845 - 2618209 + | hypothetical protein TERM 2554 2618221 - 2618248 + F 70 -8.4 -3.35224 | opp_overlap 2618223 2618225, overlap 2618220 2618223 2618225 TTAACTCTCCGATAC AATAGGGGCACA ACTA TGTGCCCCTCTA TCTTTAAGGAAGTCT TERM 2555 2618223 - 2618246 + F 82 -11 -3.24411 | opp_overlap 2618223 2618225, overlap 2618221 2618220 2618225 AACTCTCCGATACAA TAGGGGCACA ACTA TGTGCCCCTC TATCTTTAAGGAAGT TERM 2556 2618246 - 2618223 - f 83 -11 -3.48772 | opp_overlap 2618223 2618221 2618220 2618225, overlap 2618225 AACTCTCCGATACAA TAGGGGCACA ACTA TGTGCCCCTC TATCTTTAAGGAAGT TERM 2557 2618225 - 2618244 + F 95 -13.6 -3.18571 | opp_overlap 2618223 2618225, overlap 2618223 2618221 2618220 CTCTCCGATACAATA GGGGCACA ACTA TGTGCCCC TCTATCTTTAAGGAA TERM 2558 2618244 - 2618225 - f 100 -13.6 -3.31726 | opp_overlap 2618225 2618223 2618221 2618220, overlap 2618223 CTCTCCGATACAATA GGGGCACA ACTA TGTGCCCC TCTATCTTTAAGGAA TERM 2559 2618987 - 2619008 + G 74 -3.7 -5.00895 | overlap 2618988 2618989 AAGGTTCACTGTTTA ATGTTATCG AGTC CGATAACGG TTTTTATGTCATGGG Swoo_2138 2618266 - 2619294 + | BNR repeat-containing protein Swoo_2139 2619311 - 2621623 + | hypothetical protein TERM 2560 2621659 - 2621630 - f 93 -13.7 -2.74597 | opp_overlap 2621630 2621637, overlap 2621635 2621637 CCCAGATAGAGACCA GTAAACAGGGAGC TTCG GCTCCCTTTTTAC TTTTTATAATGTGAA TERM 2561 2621630 - 2621659 + F 100 -13.7 -4.95155 | opp_overlap 2621630 2621635 2621637, overlap 2621637 CCCAGATAGAGACCA GTAAACAGGGAGC TTCG GCTCCCTTTTTAC TTTTTATAATGTGAA TERM 2562 2621654 - 2621635 - f 72 -7.8 -3.8381 | opp_overlap 2621630 2621637, overlap 2621630 2621637 ATAGAGACCAGTAAA CAGGGAGC TTCG GCTCCCTT TTTACTTTTTATAAT TERM 2563 2621637 - 2621652 + F 100 -10.4 -5.2197 | opp_overlap 2621635 2621630 2621637, overlap 2621630 AGAGACCAGTAAACA GGGAGC TTCG GCTCCC TTTTTACTTTTTATA TERM 2564 2621652 - 2621637 - f 81 -10.4 -3.49884 | opp_overlap 2621637 2621630, overlap 2621635 2621630 AGAGACCAGTAAACA GGGAGC TTCG GCTCCC TTTTTACTTTTTATA TERM 2565 2622235 - 2622260 + G 74 -7.7 -4.07568 | gap 1, opp_overlap 2622235 CAGCATGGCATTAAA TCGTGTCGGGAT CAC ATCCC-ACATGA TTTTGCACACCCCAC Swoo_2140 2621894 - 2626738 + | NAD-glutamate dehydrogenase TERM 2566 2626777 - 2626754 - f 75 -8 -4.15849 | opp_overlap 2626756, overlap 2626749 2626756 ACAATAATAATTAAA TAGCCCTGGC AATT GCCGGGGCTT TTTTCGGTCTAGGAG TERM 2567 2626775 - 2626756 - f 81 -10.6 -3.65467 | opp_overlap 2626756, overlap 2626754 2626749 AATAATAATTAAATA GCCCTGGC AATT GCCGGGGC TTTTTTCGGTCTAGG TERM 2568 2626756 - 2626775 + F 100 -12.8 -5.1287 | opp_overlap 2626756 2626754 2626749 AATAATAATTAAATA GCCCTGGC AATT GCCGGGGC TTTTTTCGGTCTAGG Swoo_2141 2626798 - 2627820 + | dihydroorotate oxidase TERM 2569 2627824 - 2627839 + F 71 -4 -4.88736 | opp_overlap 2627818 GTTCGTAAATAAAAG GATCGA ATAT TTGATC TTTTTATAGATCGTG TERM 2570 2627848 - 2627879 + F 95 -13.8 -3.06133 | opp_overlap 2627850 2627868, overlap 2627848 2627850 TTTGATCTTTTTATA GATCGTGCGATCGT TTTA AAGATCGCGCGATC TTACGTAACACCTTG TERM 2571 2627850 - 2627877 + F 78 -10.6 -3.08798 | opp_overlap 2627850 2627868, overlap 2627848 2627848 TGATCTTTTTATAGA TCGTGCGATCGT TTTA AAGATCGCGCGA TCTTACGTAACACCT TERM 2572 2627895 - 2627908 + F 70 -2.5 -5.07567 | opp_overlap 2627904 TTACGTAACACCTTG TTAAA TAAA TTTAA TTTTTTAAAATATAC Swoo_2142 2627973 - 2628518 + | hypothetical protein TERM 2573 2628575 - 2628598 + F 91 -11.1 -4.72846 | TATTTATACCTGCCT CGCTACTTG TATCAT CAAGTAGCG TTTTTGACTGTCTGC TERM 2574 2628711 - 2628701 - f 75 -6.8 -4.36914 | opp_overlap 2628701 CGCTCTTCGATAAAA CTGC GAG GCAG TGATTGAATAAATCA Swoo_2143 2628811 - 2630946 + | putative RNA methylase TERM 2575 2630965 - 2630996 + G 70 -8.9 -3.2327 | gap 1, opp_overlap 2630975, overlap 2630968 TTCAAACTACATTTT GTTCCACACAGATG TTTGC CATCTGTGTG-AGC TTGCTGCTGAATTGC Swoo_2144 2630936 - 2631175 + | glutaredoxin 2 TERM 2576 2631633 - 2631661 + G 85 -13.1 -2.71364 | opp_overlap 2631613 2631611, overlap 2631613 TTGCTGGGGTTAGAT CCCGACAGCCCAC TGT GTGAGCTATCGGG TGGTTGGCAACGTAA Swoo_2145 2631177 - 2633096 + | ABC transporter related TERM 2577 2633192 - 2633213 + G 78 -10.1 -3.57561 | GTAATTGGTGCACTT CAGGGGGTG CAAG CAGCCCCTG TTTACGAGATTAAAA TERM 2578 2633653 - 2633667 + G 76 -10 -3.31144 | CTCCATGACGTCGAA GGAGCA GAC TGCTCC TTATACAGGTACAAA TERM 2579 2633740 - 2633772 + G 71 -9.1 -3.35934 | opp_overlap 2633740 2633741, overlap 2633741 CGGCTTTGCTAAAAA TGCTGCAGGAACTGA AGT TCAGTTGCTGCCGCC TTGTACCATGTATGA TERM 2580 2633772 - 2633740 - g 88 -9.1 -4.56597 | opp_overlap 2633740 2633741, overlap 2633741 CGGCTTTGCTAAAAA TGCTGCAGGAACTGA AGT TCAGTTGCTGCCGCC TTGTACCATGTATGA TERM 2581 2633741 - 2633771 + G 81 -12.6 -2.61239 | opp_overlap 2633741 2633740, overlap 2633740 GGCTTTGCTAAAAAT GCTGCAGGAACTGA AGT TCAGTTGCTGCCGC CTTGTACCATGTATG TERM 2582 2633771 - 2633741 - g 90 -12.6 -3.33744 | opp_overlap 2633740 2633741, overlap 2633740 GGCTTTGCTAAAAAT GCTGCAGGAACTGA AGT TCAGTTGCTGCCGC CTTGTACCATGTATG TERM 2583 2634414 - 2634426 + G 81 -6.3 -4.93898 | CAGAGGGTGAGGTTG TCGTT CCT AACGA TTTTTATAATGCTCT TERM 2584 2634746 - 2634756 + G 71 -4.6 -4.71426 | GAAGATGGTGTGATT GTGG GTA CCGC TTTTGTTCGTAAGCC Swoo_2146 2633132 - 2635045 + | hypothetical protein TERM 2585 2635065 - 2635082 + F 100 -11.3 -6.23545 | opp_overlap 2635065 CAATGTTAAAAAAAA TCGAGGC ATTT GCCTCGA TTTTTTTTATTTAAA TERM 2586 2635082 - 2635065 - f 100 -11.3 -5.81032 | opp_overlap 2635065 CAATGTTAAAAAAAA TCGAGGC ATTT GCCTCGA TTTTTTTTATTTAAA Swoo_2147 2635222 - 2635398 + | ribosome modulation factor Swoo_2148 2636010 - 2635495 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA Swoo_2149 2637710 - 2636079 - | ATP-dependent protease TERM 2587 2636664 - 2636624 - G 73 -5 -4.72272 | gap 2, opp_overlap 2636633 2636650, overlap 2636626 2636633 CGTCTTTACCAAAAA TGCGGTAAAGACATGAAGAT AGT ATCATCATGCCTTTA--GCA TGAATATTACCTGCC TERM 2588 2637993 - 2638026 + H 78 -11.1 -2.75268 | opp_overlap 2638000, overlap 2638000 CTCCGCCATATTCAA GACGAAAGGCTACTC GAAA GAGTGGCCTTTTTTC GTTTCAAGATAGTTA TERM 2589 2638000 - 2638019 + H 100 -10 -5.37593 | opp_overlap 2638000, overlap 2637993 ATATTCAAGACGAAA GGCTACTC GAAA GAGTGGCC TTTTTTCGTTTCAAG TERM 2590 2638019 - 2638000 - H 74 -7.8 -3.94184 | opp_overlap 2638000 2637993 ATATTCAAGACGAAA GGCTACTC GAAA GAGTGGCC TTTTTTCGTTTCAAG TERM 2591 2638124 - 2638101 - H 77 -9.6 -3.53722 | opp_overlap 2638101 GCCATATTCAGAGAA GCCTGATATC GAAA GATGTCAGGC TTTTTGCTTTTGAAA TERM 2592 2638101 - 2638124 + H 100 -11.8 -5.0925 | opp_overlap 2638101 GCCATATTCAGAGAA GCCTGATATC GAAA GATGTCAGGC TTTTTGCTTTTGAAA TERM 2593 2638222 - 2638208 - H 70 -8.6 -3.12351 | opp_overlap 2638210 CTCCGCCATATTCAA GACAAC AGA GTTGTC GTTAAAAATATCGAT TERM 2594 2638458 - 2638493 + H 100 -15.6 -2.75268 | opp_overlap 2638464, overlap 2638464 CCTCCGCCATATTTA GATGAAGCCCCAAGTA GAGA TACTTGGGGCTTTTTC GTTTCAAGATAGTTA TERM 2595 2638487 - 2638464 - H 100 -15.4 -3.28912 | opp_overlap 2638458 2638464 CCATATTTAGATGAA GCCCCAAGTA GAGA TACTTGGGGC TTTTTCGTTTCAAGA TERM 2596 2638464 - 2638487 + H 100 -15.4 -4.98531 | opp_overlap 2638464, overlap 2638458 CCATATTTAGATGAA GCCCCAAGTA GAGA TACTTGGGGC TTTTTCGTTTCAAGA TERM 2597 2638568 - 2638591 + H 100 -11.8 -5.0925 | opp_overlap 2638567 2638565 2638568 GGCATACTAAAAGAG GCCTGATATC GAAA GATGTCAGGC TTTTTGCTTTTGAAA TERM 2598 2638591 - 2638568 - H 72 -9.6 -2.86202 | opp_overlap 2638568, overlap 2638567 2638565 GGCATACTAAAAGAG GCCTGATATC GAAA GATGTCAGGC TTTTTGCTTTTGAAA TERM 2599 2638663 - 2638698 + H 100 -15.6 -2.75268 | opp_overlap 2638669, overlap 2638669 CCTTTGCCATATTTA GATGAAGCCCCAAGTA GAGA TACTTGGGGCTTTTTC GTTTCAAGATAGTTA TERM 2600 2638669 - 2638692 + H 100 -15.4 -4.98531 | opp_overlap 2638669, overlap 2638663 CCATATTTAGATGAA GCCCCAAGTA GAGA TACTTGGGGC TTTTTCGTTTCAAGA TERM 2601 2638692 - 2638669 - H 100 -15.4 -3.28912 | opp_overlap 2638669 2638663 CCATATTTAGATGAA GCCCCAAGTA GAGA TACTTGGGGC TTTTTCGTTTCAAGA TERM 2602 2638776 - 2638795 + H 76 -5 -5.07567 | opp_overlap 2638776 ATATTTAGATAGAAC CGCTAGTA GCAA TGTTAGCG TTTTTTCACATCTAG Swoo_2150 2639143 - 2639793 + | two component LuxR family transcriptional regulator TERM 2603 2640990 - 2641004 + G 70 -5.7 -4.4261 | GGTCAGTAAAGCGGT CACTC GAATG GAGTG TTTTGATATTAGCCA Swoo_2151 2639818 - 2641647 + | excinuclease ABC, C subunit Swoo_2152 2641693 - 2642250 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2604 2642897 - 2642877 - f 77 -10.5 -2.89742 | overlap 2642880 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGAATAAGCGTGCC TERM 2605 2642894 - 2642880 - f 74 -8.6 -3.5947 | overlap 2642877 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGAATAAGCGT TERM 2606 2642957 - 2642976 + F 100 -11.4 -5.36441 | opp_overlap 2642945 2642957 TAAGATGACATTGAA GCCTCGAC ATTA GTCGGGGC TTTTTTGTATCAAAC TERM 2607 2642976 - 2642957 - f 74 -9.2 -3.16154 | opp_overlap 2642957, overlap 2642945 TAAGATGACATTGAA GCCTCGAC ATTA GTCGGGGC TTTTTTGTATCAAAC TERM 2608 2643084 - 2643103 + F 100 -11.4 -5.24129 | opp_overlap 2643084 TAAGATGACATTGAA GCCTCGAC ATTA GTCGGGGC TTTTTTGTACCAAGC TERM 2609 2643103 - 2643084 - f 74 -9.2 -3.16154 | opp_overlap 2643084 TAAGATGACATTGAA GCCTCGAC ATTA GTCGGGGC TTTTTTGTACCAAGC TERM 2610 2643185 - 2643161 - f 70 -4.9 -4.63932 | TACTCTTTAATAAAA CGCGACCGA TTCAAGT TCGGCCTCG GGTGCCATCATTAAG TERM 2611 2643231 - 2643212 - f 95 -13.6 -3.16154 | opp_overlap 2643212, overlap 2643200 TAAGATGACATTGAA GCCTCGAC ATTA GTCGAGGC TTTTTTGTATCAAGC TERM 2612 2643212 - 2643231 + F 100 -13.6 -5.36441 | opp_overlap 2643200 2643212 TAAGATGACATTGAA GCCTCGAC ATTA GTCGAGGC TTTTTTGTATCAAGC TERM 2613 2643339 - 2643358 + F 100 -9.2 -5.24129 | opp_overlap 2643339 TAAGATGACATTGAA GCCTCGGC ATTA GTCGGGGC TTTTTTGTGCGCAAA TERM 2614 2643810 - 2643790 - f 77 -10.5 -2.89742 | overlap 2643793 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGAATAAGCGTGCC TERM 2615 2643807 - 2643793 - f 74 -8.6 -3.5947 | overlap 2643790 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGAATAAGCGT TERM 2616 2643870 - 2643889 + F 86 -9.2 -4.42974 | opp_overlap 2643870 TAAGATGACATTGAA GCCTCGGC ATTA GTCGGGGC TTTCTTGTATCTAAA TERM 2617 2643984 - 2644003 + F 100 -9.2 -5.24129 | opp_overlap 2643984 TAAGATGACATTGAA GCCTCGGC ATTA GTCGGGGC TTTTTTGTACCAAGC TERM 2618 2644130 - 2644111 - f 74 -9.2 -3.16154 | opp_overlap 2644111, overlap 2644099 TAAGATGACATTGAA GCCTCGAC ATTA GTCGGGGC TTTTTTGTATCAAGC TERM 2619 2644111 - 2644130 + F 100 -11.4 -5.36441 | opp_overlap 2644099 2644111 TAAGATGACATTGAA GCCTCGAC ATTA GTCGGGGC TTTTTTGTATCAAGC TERM 2620 2644240 - 2644257 + F 83 -6.9 -4.87592 | AAGATGACATCGAAG CCTCGGC ATTA GTCGGGG TTTTCTTGTATATAA Swoo_2153 2644581 - 2645966 + | peptidoglycan binding domain-containing protein Swoo_2154 2646112 - 2646627 + | hypothetical protein TERM 2621 2647026 - 2647056 + F 83 -8.5 -4.40298 | opp_overlap 2647025, overlap 2647027 AATGCACGATTATAT GGTCTTATTTTGT TCCAT ACAAAATAAGACA TTTCTTCCTTTCCAT TERM 2622 2647027 - 2647055 + F 89 -12 -3.23094 | opp_overlap 2647025, overlap 2647026 ATGCACGATTATATG GTCTTATTTTGT TCCAT ACAAAATAAGAC ATTTCTTCCTTTCCA Swoo_2155 2647302 - 2647589 + | ribosomal protein L25 TERM 2623 2647606 - 2647639 + T 100 -19.9 -4.15669 | opp_overlap 2647608 2647616, overlap 2647616 TGTATTGTGTTATCA CATAAAAAAAGCGCC TAAT GGCGCTTTTTTTATG TTTCATTTCTAAGTT TERM 2624 2647637 - 2647608 - T 100 -16.7 -2.78596 | opp_overlap 2647606 2647616, overlap 2647616 TATTGTGTTATCACA TAAAAAAAGCGCC TAAT GGCGCTTTTTTTA TGTTTCATTTCTAAG TERM 2625 2647629 - 2647616 - T 100 -9.5 -5.74122 | opp_overlap 2647606 2647616, overlap 2647608 TATCACATAAAAAAA GCGCC TAAT GGCGC TTTTTTTATGTTTCA TERM 2626 2647616 - 2647629 + T 100 -9.5 -5.88197 | opp_overlap 2647616 2647608, overlap 2647606 TATCACATAAAAAAA GCGCC TAAT GGCGC TTTTTTTATGTTTCA Swoo_2156 2649183 - 2647657 - | SpoVR family protein TERM 2627 2648835 - 2648861 + g 71 -8.9 -3.28447 | gap 1, opp_overlap 2648826 2648825, overlap 2648833 CAAAACTGGCATGAG CCATCACAAGTG CCTG CA-TTGTGATGG TATTCTCCTCCATCA TERM 2628 2649147 - 2649161 + g 74 -4.2 -4.98468 | opp_overlap 2649129 2649126, overlap 2649132 AGGTCCAATCTGGCC CATCGT CTA GCGGTG TTCTTTTTTTCTTGT Swoo_2157 2650478 - 2649192 - | hypothetical protein TERM 2629 2649265 - 2649280 + g 77 -3.2 -5.28826 | opp_overlap 2649279, overlap 2649248 2649272 2649279 TTTATATGTTGTACA GCTATG TTAT CAAAGC TTTTTTGTAAGCTTT TERM 2630 2649726 - 2649738 + g 72 -5.5 -4.58283 | CATGACAGCTTGACT GGAGG GGA TCTCC TTTTTAGCGAAGTTG TERM 2631 2649854 - 2649864 + g 72 -6.8 -4.20696 | TTCTTTCAGCTTCTG CACC TGG GGTG TTTTCAAGTTCCTCA TERM 2632 2650170 - 2650198 + g 79 -8.2 -4.4009 | gap 1, overlap 2650195 TCCTTGTCCCGCTCC TTGACCG-CCACC TGAT GGTGGACGCTCAA TTTTGTCGCCTCGGG TERM 2633 2650501 - 2650478 - R 71 -9.6 -2.52896 | overlap 2650483 GCACCTCCCAAGTCA TAGCAGGGAG CAAG CTCCCTACCA GTCCCTAAGTTAAGA Swoo_2158 2652445 - 2650511 - | putative serine protein kinase, PrkA TERM 2634 2652600 - 2652568 - R 83 -7.7 -4.66418 | opp_overlap 2652574 2652576, overlap 2652570 2652578 TAAAACAATAACAAA CAGTTGCAAATGCAA CAG TTGCAAATGCAACAG TTGCAGATGTGGTTG TERM 2635 2652598 - 2652570 - R 79 -8.9 -3.90009 | opp_overlap 2652574 2652576, overlap 2652568 2652578 AAACAATAACAAACA GTTGCAAATGCAA CAG TTGCAAATGCAAC AGTTGCAGATGTGGT TERM 2636 2652605 - 2652578 - R 95 -12.8 -3.6292 | opp_overlap 2652576 2652574, overlap 2652570 2652568 ACAAACAGTTGCAAA TGCAACAGTTGC AAAT GCAACAGTTGCA GATGTGGTTGGGAAA TERM 2637 2652652 - 2652679 + r 73 -7.1 -4.18197 | opp_overlap 2652657, overlap 2652657 CAGGGAGTAAGAACA AAAAAGGAGCT ATAAAA AGCTCCTTTTA TTTTGACTAACGAGT TERM 2638 2652674 - 2652657 - R 93 -7 -5.66229 | opp_overlap 2652657 2652652 AGTAAGAACAAAAAA GGAGCT ATAAAA AGCTCC TTTTATTTTGACTAA TERM 2639 2652657 - 2652674 + r 85 -7 -5.10933 | opp_overlap 2652657, overlap 2652652 AGTAAGAACAAAAAA GGAGCT ATAAAA AGCTCC TTTTATTTTGACTAA Swoo_2159 2653306 - 2652725 - | superoxide dismutase Swoo_2160 2653520 - 2653870 + | glutaredoxin-like protein TERM 2640 2653922 - 2653945 + T 100 -8.8 -5.27923 | opp_overlap 2653922 2653924 TGACGGTTTTAATTA GACCAGTTGC TCTT GCTGCTGGTC TTTTTTATGCACTTG Swoo_2161 2655153 - 2653919 - | transposase TERM 2641 2654879 - 2654903 + g 71 -2.1 -5.0538 | overlap 2654883 CGTAAATGTTCATCC TCAAGCTCTTT TTC AAGGCGCTTTA TTTTTTGAGCTGGCG TERM 2642 2654883 - 2654899 + g 73 -2.9 -5.05153 | overlap 2654879 AATGTTCATCCTCAA GCTCTTT TTC AAGGCGC TTTATTTTTTGAGCT TERM 2643 2655188 - 2655160 - R 86 -9.8 -4.30987 | gap 1, opp_overlap 2655168 AGTTGTCATAATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACAGATTGAATA TERM 2644 2655200 - 2655235 + r 90 -11.4 -4.09827 | opp_overlap 2655209, overlap 2655209 GGACAAGACAGATTG AATAAAAAAGCCTTTC ATCT GAAAGGCTTTTTTGTA TTTGATTGTATTGTC TERM 2645 2655226 - 2655209 - R 100 -9.9 -5.49234 | opp_overlap 2655209 2655200 AGATTGAATAAAAAA GCCTTTC ATCT GAAAGGC TTTTTTGTATTTGAT TERM 2646 2655209 - 2655226 + r 100 -9.9 -5.5762 | opp_overlap 2655209, overlap 2655200 AGATTGAATAAAAAA GCCTTTC ATCT GAAAGGC TTTTTTGTATTTGAT Swoo_2162 2656499 - 2655252 - | uracil-xanthine permease Swoo_2163 2656686 - 2657795 + | hypothetical protein Swoo_2164 2657869 - 2658579 + | DnaA regulatory inactivator Hda Swoo_2165 2660886 - 2658916 - | hypothetical protein TERM 2647 2660979 - 2661000 + r 79 -8.7 -4.1891 | opp_overlap 2660979 2660980 2660995, overlap 2660980 TAGCAAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 2648 2661000 - 2660979 - R 79 -8.7 -4.17002 | opp_overlap 2660979 2660980, overlap 2660980 2660995 TAGCAAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 2649 2660999 - 2660980 - R 87 -12.2 -3.09117 | opp_overlap 2660979 2660980, overlap 2660979 2660995 AGCAAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 2650 2660980 - 2660999 + r 87 -12.2 -3.11024 | opp_overlap 2660980 2660979 2660995, overlap 2660979 AGCAAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 2651 2661009 - 2661027 + r 80 -10.2 -3.60214 | opp_overlap 2660995, overlap 2661010 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTGTCTACTTCAAAT TERM 2652 2661010 - 2661026 + r 93 -13.7 -2.75647 | opp_overlap 2660995, overlap 2661009 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTGTCTACTTCAAA TERM 2653 2661550 - 2661569 + r 90 -12.2 -3.57263 | opp_overlap 2661550 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 2654 2661569 - 2661550 - R 90 -12.2 -3.44319 | opp_overlap 2661550 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 2655 2661590 - 2661603 + r 78 -9.5 -3.65317 | opp_overlap 2661590, overlap 2661584 GGCTGAAAATAAAAA GCGCC CTTG GGCGC TTCTAGTTTATCGCT TERM 2656 2661603 - 2661590 - R 100 -9.5 -5.45802 | opp_overlap 2661590 2661584 GGCTGAAAATAAAAA GCGCC CTTG GGCGC TTCTAGTTTATCGCT Swoo_2167 2662011 - 2661640 - | hypothetical protein Swoo_2168 2662375 - 2662025 - | arsenate reductase Swoo_2169 2664035 - 2662575 - | peptidase M48 Ste24p TERM 2657 2663415 - 2663429 + g 89 -10 -4.47707 | overlap 2663412 AACCAAAATTTGCAT GCCGAT GCG ATCGGC TTCTTTTTCATGAAG TERM 2658 2663774 - 2663761 - G 74 -2.3 -5.1971 | AGGAAAAAGTAAAAA GGGGT TTTG ACGCC AGTAGCATGCGCCAC Swoo_2170 2664276 - 2664497 + | SirA family protein TERM 2659 2664989 - 2664970 - g 70 -7.2 -3.96216 | overlap 2664981 TGCTGAGTTAAAGAA GATGTTAG ATAC CCAACATC TACTCGATATCGGTA Swoo_2171 2664554 - 2665654 + | hypothetical protein TERM 2660 2665662 - 2665650 - T 74 -6.3 -4.57755 | opp_overlap 2665650 2665648 AGTCAGCAGAGAAAA GTTAG CCA CTAAC TCTTTTTAAAACACT TERM 2661 2665706 - 2665731 + T 85 -10.5 -4.09685 | opp_overlap 2665711, overlap 2665711 TAATAGCAATTAATA TAGAATGGGGC GCAA GCCCCATTTTG TTTTCAGCCCTAAAC TERM 2662 2665726 - 2665711 - T 83 -10.4 -3.72909 | opp_overlap 2665711 2665706 GCAATTAATATAGAA TGGGGC GCAA GCCCCA TTTTGTTTTCAGCCC TERM 2663 2665711 - 2665726 + T 93 -10.4 -5.07652 | opp_overlap 2665711, overlap 2665706 GCAATTAATATAGAA TGGGGC GCAA GCCCCA TTTTGTTTTCAGCCC TERM 2664 2665746 - 2665765 + T 90 -12.2 -3.44319 | opp_overlap 2665746 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 2665 2665765 - 2665746 - T 90 -12.2 -3.57144 | opp_overlap 2665746 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 2666 2666306 - 2666288 - T 80 -10.2 -3.60214 | opp_overlap 2666300, overlap 2666289 ATTTGAAGTAGACAA CGCCCCCT TTT AGGGGGCT AATACAAAGCCACCT TERM 2667 2666305 - 2666289 - T 93 -13.7 -2.75647 | opp_overlap 2666300, overlap 2666288 TTTGAAGTAGACAAC GCCCCCT TTT AGGGGGC TAATACAAAGCCACC TERM 2668 2666336 - 2666315 - T 79 -8.7 -4.1891 | opp_overlap 2666300 2666315 2666316, overlap 2666316 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTATCTGT TERM 2669 2666315 - 2666336 + T 79 -8.7 -4.07595 | opp_overlap 2666315 2666316, overlap 2666300 2666316 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTATCTGT TERM 2670 2666316 - 2666335 + T 87 -12.2 -3.03473 | opp_overlap 2666315 2666316, overlap 2666300 2666315 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTATCTG TERM 2671 2666335 - 2666316 - T 87 -12.2 -3.11024 | opp_overlap 2666300 2666316 2666315, overlap 2666315 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTATCTG Swoo_2173 2667251 - 2666358 - | LysR family transcriptional regulator TERM 2672 2666404 - 2666420 + g 71 -3.7 -4.76874 | overlap 2666390 ACGGCCAACGAGCGA TAGACGA TGG TCGTTTG TTTTGCTTTTATATT TERM 2673 2666619 - 2666642 + g 71 -4 -4.75404 | overlap 2666621 CCAACTCCCAGTTTT CATCTTAAAA TATT TTTTAAGATA TTTTTCATGGAGTTT TERM 2674 2666819 - 2666841 + g 82 -7.6 -4.68424 | opp_overlap 2666831 GTTCTTTGGTTGTGG TGACGCAGCC AAC GGCTTCGCCA TTTTTCAATAGATTG Swoo_2174 2667390 - 2668001 + | lysine exporter protein LysE/YggA TERM 2675 2668025 - 2668042 + T 100 -12.7 -4.16943 | opp_overlap 2668025 TCTTAGAGATAAAAA TGCCCGC TATT GCGGGCA TTTTGGGGTATAAAC TERM 2676 2668042 - 2668025 - T 100 -12.7 -5.03994 | opp_overlap 2668025 TCTTAGAGATAAAAA TGCCCGC TATT GCGGGCA TTTTGGGGTATAAAC Swoo_2175 2668540 - 2668070 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Swoo_2176 2669103 - 2668564 - | amino acid-binding ACT domain-containing protein Swoo_2177 2669458 - 2670342 + | dihydrodipicolinate synthase Swoo_2178 2670346 - 2671461 + | NlpB/DapX family lipoprotein TERM 2677 2671503 - 2671487 - f 95 -12.3 -3.9941 | opp_overlap 2671487 GGTTCGATAATTAAA GGAGGCT TAT AGCCTCC TTTTTTGTGCCTGGG TERM 2678 2671487 - 2671503 + F 100 -12.3 -5.28176 | opp_overlap 2671487 GGTTCGATAATTAAA GGAGGCT TAT AGCCTCC TTTTTTGTGCCTGGG Swoo_2179 2671657 - 2672742 + | RND family efflux transporter MFP subunit TERM 2679 2673140 - 2673129 - g 72 -3.6 -4.89852 | CCAGAGGTACAAAAA GCCA ATGG CGGC GATGAAGTGATCATG Swoo_2180 2672739 - 2675831 + | acriflavin resistance protein TERM 2680 2675860 - 2675882 + T 100 -12.1 -5.24129 | opp_overlap 2675860 TAATTGAAATAAAAA GCCCAAAAG TGATT CTTTTGGGC TTTTTTATGACGAGA TERM 2681 2675882 - 2675860 - T 100 -12.1 -5.33026 | opp_overlap 2675860 TAATTGAAATAAAAA GCCCAAAAG TGATT CTTTTGGGC TTTTTTATGACGAGA Swoo_2181 2676176 - 2675916 - | hypothetical protein Swoo_2182 2676969 - 2676232 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 2682 2677032 - 2677018 - R 100 -11.4 -4.70583 | TTGATTAAGAGAAAA GGGCTC AAA GAGCCC TGATCAAATTGTGCG Swoo_2183 2678119 - 2677049 - | iron-containing alcohol dehydrogenase TERM 2683 2678128 - 2678139 + r 71 -4.4 -4.8048 | opp_overlap 2678128 AACTCATTACAACAC TCTC CGTT GAGA TTTTTACTGTAAGAA TERM 2684 2678191 - 2678156 - R 76 -10.6 -2.78813 | overlap 2678155 2678159 TTTTACTGTAAGAAG TGATGTCGCACGTTAA GAGC TTAAGGTGCGACATAA GTATCAGGTGTATTA TERM 2685 2678188 - 2678159 - R 85 -12.3 -2.66106 | overlap 2678156 2678155 TACTGTAAGAAGTGA TGTCGCACGTTAA GAGC TTAAGGTGCGACA TAAGTATCAGGTGTA Swoo_2184 2679388 - 2678204 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 2686 2678254 - 2678266 + g 72 -7.7 -3.91911 | GTGCGATCTCATCTT CTGTC CAT GACAG TTTGATTAGCATAGA TERM 2687 2679562 - 2679608 + r 78 -10.2 -3.31877 | GCGATGGAGGAGTGC ATTTTTGCGTGCGCCTCAGCAT CAT ATTTTGAGGCGCACGGAGAAGC TTGGGTTGTTACTTT Swoo_2185 2680228 - 2679617 - | carbonate dehydratase TERM 2688 2680063 - 2680079 + g 77 -9.5 -3.57144 | AGACTTCGCCAGGCA TCAGATC AAT GATCTGA TTTGAAGGTACACGG TERM 2689 2680111 - 2680127 + g 71 -4.3 -4.67982 | opp_overlap 2680111, overlap 2680112 TATCGGAGCAACCGA TCCAGAG ATA CTCAGGG TTTTGTTGGGTGGCC Swoo_2186 2681223 - 2680393 - | alpha/beta hydrolase fold Swoo_2187 2681945 - 2681253 - | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin TERM 2690 2681848 - 2681884 + g 70 -10.2 -2.52516 | gap 1, overlap 2681847 GCTATAGTCATACTT GCCA-AGGCTTGAGCCG TTTT TGGCTCGAGCCTATGAC CTTGATAGTCCACAA Swoo_2188 2683069 - 2681939 - | succinyl-diaminopimelate desuccinylase TERM 2691 2682434 - 2682452 + g 84 -13.2 -2.57985 | opp_overlap 2682438, overlap 2682438 CCGTGCCAGTTCATC CAAAGCGG GCG CCGCTTTG TGGATTGGATTATCC TERM 2692 2682438 - 2682448 + g 72 -8.2 -3.98484 | opp_overlap 2682438, overlap 2682434 GCCAGTTCATCCAAA GCGG GCG CCGC TTTGTGGATTGGATT Swoo_2189 2683410 - 2683066 - | arsenate reductase and related TERM 2693 2683371 - 2683387 + g 83 -3.7 -5.4505 | TCCACTTTCGCGCCT TTTTGAC TGT GTCACAA TTTTTTATTCCGAAA TERM 2694 2683488 - 2683506 + r 74 -8.8 -3.65294 | overlap 2683484 TTAGTCGATTTTTAT GGGCATTG TGT CATTGCCC TTGGTTTCTCTCAAG Swoo_2190 2684111 - 2683602 - | PTS system, glucose subfamily, IIA subunit Swoo_2191 2685886 - 2684186 - | phosphoenolpyruvate-protein phosphotransferase TERM 2695 2684490 - 2684479 - G 71 -4.4 -4.73448 | opp_overlap 2684479 ACAGAGAGGGAAAAA GCTT AGTT AAGC TTGGATTTGTTCTGT Swoo_2192 2686198 - 2685941 - | phosphotransferase system, phosphocarrier protein HPr Swoo_2193 2686615 - 2686229 - | hypothetical protein TERM 2696 2686271 - 2686291 + g 77 -4.8 -5.00884 | gap 1 CTTTTTTAGTGCACT GAC-AGCTT CATT AAGCTTGTC TTTTTTGACGAGGAT TERM 2697 2686702 - 2686686 - R 83 -7.2 -4.93365 | opp_overlap 2686686 TCCTATAACTAAAAA GGGAGC AATTA GCCCCC TTAGTTTATACCAAA Swoo_2194 2688389 - 2686752 - | methyl-accepting chemotaxis sensory transducer TERM 2698 2688869 - 2688892 + G 74 -3.9 -4.92239 | overlap 2688868 2688867 GAGTATTACTCGCAC CAGCTTGAA GCCGGA TTTAGGCTG TTTTTCAATTTTTGA Swoo_2195 2688654 - 2689439 + | hypothetical protein TERM 2699 2689468 - 2689484 + F 91 -7.2 -5.24129 | opp_overlap 2689468 TTAATGTCAGATTAA CGGCGC CTTGT GCGTCG TTTTTTATGGGAAGA Swoo_2196 2689573 - 2690595 + | LacI family transcription regulator Swoo_2197 2691234 - 2690617 - | DNA polymerase III, epsilon subunit TERM 2700 2691317 - 2691296 - R 100 -13 -5.48063 | opp_overlap 2691296 ATCTAAGACAAAAAA GCCCGCGA GGTAAG TCGCGGGC TTTTTAAGGAAACTT TERM 2701 2691296 - 2691317 + r 100 -13 -4.57341 | opp_overlap 2691296 ATCTAAGACAAAAAA GCCCGCGA GGTAAG TCGCGGGC TTTTTAAGGAAACTT Swoo_2198 2693428 - 2691344 - | translation elongation factor G TERM 2702 2694272 - 2694288 + G 77 -9.5 -3.62176 | CTGCTCACCCAGCTC TGCTTCA CAC TGAAGCA TTTGAGCCTATTATT Swoo_2199 2693791 - 2694936 + | cupin 4 family protein TERM 2703 2694961 - 2694978 + F 93 -11.3 -5.16841 | opp_overlap 2694961, overlap 2694977 AACGGATTGATTAAA TGGAGCC TTAT GGCTCCA TTTTTGTTACTCTCG TERM 2704 2694978 - 2694961 - f 84 -11.3 -3.76968 | opp_overlap 2694961 2694977 AACGGATTGATTAAA TGGAGCC TTAT GGCTCCA TTTTTGTTACTCTCG Swoo_2200 2695035 - 2695403 + | hypothetical protein TERM 2705 2695436 - 2695459 + T 100 -15.4 -2.79023 | opp_overlap 2695436 2695439, overlap 2695439 GACTCGTTGTACAAA GAAGCCAGTC GATT GACTGGCTTC TGGTTCGTGGCATTC TERM 2706 2695459 - 2695436 - T 100 -15.4 -3.86015 | opp_overlap 2695436 2695439, overlap 2695439 GACTCGTTGTACAAA GAAGCCAGTC GATT GACTGGCTTC TGGTTCGTGGCATTC TERM 2707 2695456 - 2695439 - T 86 -11.3 -4.06419 | opp_overlap 2695436 2695439, overlap 2695436 TCGTTGTACAAAGAA GCCAGTC GATT GACTGGC TTCTGGTTCGTGGCA TERM 2708 2695439 - 2695456 + T 83 -11.3 -3.54029 | opp_overlap 2695439 2695436, overlap 2695436 TCGTTGTACAAAGAA GCCAGTC GATT GACTGGC TTCTGGTTCGTGGCA Swoo_2201 2698028 - 2695506 - | glucan 1,4-alpha-glucosidase TERM 2709 2697048 - 2697079 + g 74 -9.6 -3.31476 | gap 1, overlap 2697046 TACAGTATTATTACC GTCT-GCTAATGTTG CAT CAGCATTGGCTAGAC TCTCTGTTTTACTTT Swoo_2202 2699752 - 2698097 - | major facilitator transporter TERM 2710 2699240 - 2699226 - G 100 -6.4 -5.65177 | ACACCGATAAAAAAA CTCTGC ATG GCAAAG CCTAAAGTACGTTGA Swoo_2203 2700359 - 2700718 + | endoribonuclease L-PSP Swoo_2204 2700878 - 2701681 + | hypothetical protein TERM 2711 2701981 - 2701999 + G 74 -5.9 -4.69326 | overlap 2701984 CAGCAGCACAAACTG GTAGCGG GAAAA CCGCTTC TTTTGTGTTACCTAT TERM 2712 2701984 - 2701996 + G 73 -6.2 -4.44211 | overlap 2701981 CAGCACAAACTGGTA GCGG GAAAA CCGC TTCTTTTGTGTTACC TERM 2713 2702718 - 2702692 - g 74 -11 -2.78816 | opp_overlap 2702687 2702717 CCATTCGTGAGCAGA TCTTGGCAGATT TTA AATCTGGCAAGA TAAGGTATCTGATCT Swoo_2205 2701839 - 2703188 + | DEAD/DEAH box helicase domain-containing protein TERM 2714 2703228 - 2703252 + T 100 -11.5 -4.40173 | opp_overlap 2703228 2703223 AAGTAGAATAGCGAA GGCTCAGGT TGTCATT ACCTGAGCC TTTTACGTTTCTAGT TERM 2715 2703252 - 2703228 - T 84 -11.5 -3.22841 | opp_overlap 2703228, overlap 2703223 AAGTAGAATAGCGAA GGCTCAGGT TGTCATT ACCTGAGCC TTTTACGTTTCTAGT Swoo_2206 2705269 - 2703263 - | alpha amylase catalytic region TERM 2716 2703329 - 2703346 + g 78 -8.5 -4.07568 | opp_overlap 2703344 ACCTTGGTTGGCCCT GTGTTGT ATCG ACAACAC TTTTGAGCCAAAAGG Swoo_2207 2707178 - 2705283 - | alpha amylase catalytic region Swoo_2208 2708717 - 2707209 - | tryptophan halogenase Swoo_2209 2711542 - 2708816 - | outer membrane insertion C-terminal signal TERM 2717 2710224 - 2710214 - G 70 -6.8 -4.15044 | TGGTTTGTTAATAAA GCCA TCT TGGC TATCAGGACCGATAG TERM 2718 2712187 - 2712198 + G 77 -4.4 -5.08824 | AATGTGGATGCTATT TGGA TCTC TCCA TTTTTTAAGTCACCA Swoo_2210 2711917 - 2713677 + | alpha amylase catalytic region Swoo_2211 2713709 - 2714983 + | glucose/galactose transporter TERM 2719 2715003 - 2715018 + F 100 -11.8 -4.39571 | TGCCGATTGGTATTA GCGGCC CGTT GGCCGC TTTTGAATTTGTCAG TERM 2720 2715697 - 2715719 + G 75 -10.6 -2.84566 | overlap 2715695 2715701 GAGGTTGATGGTGTC GATACCGCCT TAG AGGTGGTGTC TGATTCTGCACTATT TERM 2721 2715891 - 2715863 - g 76 -6 -4.56597 | opp_overlap 2715852 GTGCGGGTGGAAAAA CCCTTTCAATTG CAGCT CAGATGAAAGGG AAAGGTCGTTTACTG TERM 2722 2716113 - 2716099 - g 78 -10 -3.60475 | opp_overlap 2716097 AACCCTGATGCTAAA TGGCGT GAC ACGCCA GATCGTCTCCCTGTT Swoo_2212 2715145 - 2716359 + | Fmu (Sun) domain-containing protein TERM 2723 2716413 - 2716397 - f 95 -12.3 -4.183 | opp_overlap 2716397 TCAACTGTTAATAAA CGAGGCT AAT AGCCTCG TTTTTTTTGCAGGTA TERM 2724 2716397 - 2716413 + F 100 -12.3 -5.76949 | opp_overlap 2716397 TCAACTGTTAATAAA CGAGGCT AAT AGCCTCG TTTTTTTTGCAGGTA Swoo_2213 2716532 - 2718760 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Swoo_2214 2718853 - 2719596 + | cytochrome B561 Swoo_2215 2719763 - 2723095 + | non-specific serine/threonine protein kinase Swoo_2216 2723842 - 2723156 - | flagellin domain-containing protein Swoo_2217 2724411 - 2723992 - | hypothetical protein TERM 2725 2724871 - 2724850 - H 71 -9.5 -2.63631 | opp_overlap 2724848 TTAATGTTTATATTA GGCGTTTAC GGTT GTAAACACC GGTTAGCTCATCAGT Swoo_2219 2725130 - 2725645 + | redoxin domain-containing protein Swoo_2220 2725642 - 2725878 + | hypothetical protein TERM 2726 2727263 - 2727286 + G 82 -10.4 -3.91402 | gap 1, overlap 2727279 CCAGGATAATGGTGA TGAGCGAG-TG GGT CAGCTCGCTCA TTTAGGTTTATATGA Swoo_2221 2725884 - 2727344 + | hypothetical protein Swoo_2222 2727434 - 2727922 + | transposase and inactivated derivative TERM 2727 2727999 - 2727964 - T 77 -10.7 -2.91264 | gap 1, opp_overlap 2727969 2727975, overlap 2727967 2727975 CGTTTTATTTAGAGA GAATAAAAAAACGCCC ATATA GGGCGTTTTTCT-TTC AGATTTAGGGCTTAG TERM 2728 2727997 - 2727967 - T 74 -9.1 -3.60525 | opp_overlap 2727969 2727975, overlap 2727964 2727975 TTTATTTAGAGAGAA TAAAAAAACGCCC ATATA GGGCGTTTTTCTT TCAGATTTAGGGCTT TERM 2729 2727969 - 2727995 + T 79 -9.5 -3.71649 | opp_overlap 2727967 2727964 2727975, overlap 2727975 TATTTAGAGAGAATA AAAAAACGCCC ATATA GGGCGTTTTTC TTTCAGATTTAGGGC TERM 2730 2727989 - 2727975 - T 100 -8.5 -5.9218 | opp_overlap 2727975 2727969, overlap 2727967 2727964 GAGAGAATAAAAAAA CGCCC ATATA GGGCG TTTTTCTTTCAGATT TERM 2731 2727975 - 2727989 + T 100 -8.5 -5.29846 | opp_overlap 2727967 2727964 2727975, overlap 2727969 GAGAGAATAAAAAAA CGCCC ATATA GGGCG TTTTTCTTTCAGATT Swoo_2223 2729411 - 2728011 - | asparaginyl-tRNA synthetase TERM 2732 2728128 - 2728144 + g 73 -10.1 -3.05022 | TCCTGAATGTGGTAC TGTGCCG TAA CGGCGCA TGTCTCTGTACCACC TERM 2733 2729323 - 2729302 - G 91 -9.5 -4.6971 | opp_overlap 2729320 TAAACGGCAAGAAAA GAGATCCCA GCCT TGGAATCTC GACGGGATCTTACCC Swoo_2224 2729675 - 2730010 + | hypothetical protein Swoo_2225 2730588 - 2730019 - | NUDIX hydrolase Swoo_2226 2732027 - 2730624 - | para-aminobenzoate synthase, subunit I TERM 2734 2733192 - 2733182 - g 74 -6.8 -4.4017 | opp_overlap 2733182 TGAAGCGGGAGAAAA CACG CGC CGTG TTGATCTAAACACTG TERM 2735 2733427 - 2733402 - g 71 -9.7 -3.05384 | CCTGTTGGCAGTGAA GTTGTAGGACC TGCT GGCCCAACAAC GGCGACTCGTATGGA Swoo_2227 2732235 - 2733749 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2736 2733774 - 2733796 + F 81 -10.6 -3.47029 | opp_overlap 2733767 2733771 GCGCAAGATAAACTT GGCTTAGGTG CCT TGCCTAAGCC TTGCTATTTGGATAA Swoo_2228 2733997 - 2736051 + | peptidase S9 prolyl oligopeptidase TERM 2737 2736123 - 2736105 - f 79 -5.9 -4.87803 | opp_overlap 2736105, overlap 2736100 TAGCTTTAAACAAAA GGTCAGC TAAAT GCTGGCC TTTTTTGTGGGTAAA TERM 2738 2736105 - 2736123 + F 100 -8.1 -5.28176 | opp_overlap 2736100 2736105 TAGCTTTAAACAAAA GGTCAGC TAAAT GCTGGCC TTTTTTGTGGGTAAA Swoo_2229 2736191 - 2737528 + | membrane protein-like protein TERM 2739 2737846 - 2737824 - g 90 -12.8 -3.4072 | TACTCTTGAGGAGAA CTCTGGCTTG TGG CAAGCCAAAG AGGTAACACGTGATA Swoo_2230 2737528 - 2738100 + | hypothetical protein Swoo_2231 2738110 - 2738598 + | hypothetical protein TERM 2740 2738603 - 2738576 - f 79 -6.4 -4.70772 | gap 1, opp_overlap 2738575 2738576 ATACAGGTAAGAAAA CCCGACTAATAGA AAA TGTAT-AGTCGGG GTTGATTAACAGTTA Swoo_2232 2738654 - 2739328 + | HAD family hydrolase Swoo_2233 2740333 - 2739359 - | hypothetical protein TERM 2741 2739917 - 2739894 - G 73 -5.3 -4.72029 | gap 1 CCTAACCCAATAAAA GCGA-CCACC AGAGA GATGGATCGC ATGGGACCAAATTTA TERM 2742 2740664 - 2740693 + r 91 -10.9 -4.75472 | opp_overlap 2740669, overlap 2740669 ACTTATTGAAAATAA AAAAACCGGAATA TTGC TATTCCGGTTTTG TTTTGTTCCTGTGGC TERM 2743 2740688 - 2740669 - R 100 -10.8 -6.09196 | opp_overlap 2740664 2740669 TTGAAAATAAAAAAA CCGGAATA TTGC TATTCCGG TTTTGTTTTGTTCCT TERM 2744 2740669 - 2740688 + r 100 -10.8 -5.28831 | opp_overlap 2740669, overlap 2740664 TTGAAAATAAAAAAA CCGGAATA TTGC TATTCCGG TTTTGTTTTGTTCCT Swoo_2234 2742296 - 2740713 - | isocitrate lyase and phosphorylmutase Swoo_2235 2742410 - 2743354 + | LysR family transcriptional regulator Swoo_2236 2743601 - 2745778 + | malate synthase G TERM 2745 2745800 - 2745823 + F 100 -7.4 -5.79595 | GACTATCGACACTGA GAGCTGTGGC GTAC GTCATGGCTC TTTTTTGTTTTCAGC TERM 2746 2745864 - 2745845 - f 90 -12.2 -3.57144 | opp_overlap 2745845 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG TERM 2747 2745845 - 2745864 + F 90 -12.2 -3.44319 | opp_overlap 2745845 GTTTTCAGCCCTAAA CCACCTAC TTCA GTAGGTGG TTATCATCAATTAGG Swoo_2237 2745948 - 2746382 + | transposase IS200-family protein TERM 2748 2746405 - 2746387 - f 80 -10.2 -3.60214 | opp_overlap 2746399, overlap 2746388 ATTTGAAGTAGATAA CGCCCCCT TTT AGGGGGCT AATACAAAGCCACCT TERM 2749 2746404 - 2746388 - f 93 -13.7 -2.75647 | opp_overlap 2746399, overlap 2746387 TTTGAAGTAGATAAC GCCCCCT TTT AGGGGGC TAATACAAAGCCACC TERM 2750 2746435 - 2746414 - f 79 -8.7 -4.1891 | opp_overlap 2746399 2746414 2746415, overlap 2746415 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTTTTAAG TERM 2751 2746414 - 2746435 + F 83 -8.7 -4.21465 | opp_overlap 2746414 2746415, overlap 2746399 2746415 GGGGGCTAATACAAA GCCACCTTC TTCA GAAGGTGGA TTCTTTACTTTTAAG TERM 2752 2746415 - 2746434 + F 87 -12.2 -3.11795 | opp_overlap 2746414 2746415, overlap 2746399 2746414 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTTTTAA TERM 2753 2746434 - 2746415 - f 87 -12.2 -3.11024 | opp_overlap 2746399 2746415 2746414, overlap 2746414 GGGGCTAATACAAAG CCACCTTC TTCA GAAGGTGG ATTCTTTACTTTTAA Swoo_2238 2746545 - 2746850 + | TM2 domain-containing protein Swoo_2239 2746863 - 2747327 + | hypothetical protein Swoo_2240 2747364 - 2747792 + | glutathione-dependent formaldehyde-activating, GFA TERM 2754 2747945 - 2747914 - T 93 -11.6 -4.26903 | opp_overlap 2747919, overlap 2747919 TCTAGCCCATTAAAA TGAAACTGCCGAGC AATT GCTCGGCAGTTTGT TTTAAAGCACTCTCA TERM 2755 2747919 - 2747940 + T 100 -15.9 -4.64861 | opp_overlap 2747919 2747914 CCCATTAAAATGAAA CTGCCGAGC AATT GCTCGGCAG TTTGTTTTAAAGCAC TERM 2756 2747940 - 2747919 - T 100 -15.9 -4.23781 | opp_overlap 2747919, overlap 2747914 CCCATTAAAATGAAA CTGCCGAGC AATT GCTCGGCAG TTTGTTTTAAAGCAC Swoo_2241 2750569 - 2747969 - | iron-containing alcohol dehydrogenase TERM 2757 2751371 - 2751389 + G 80 -4.7 -5.27923 | GGATATGGAATTGGA TTTAACA CTGTA TGTTAAA TTTTTTCTGGGATTA Swoo_2242 2751360 - 2751998 + | multiple antibiotic resistance (MarC)-related protein TERM 2758 2752042 - 2752022 - f 82 -11.1 -3.28119 | opp_overlap 2752022 ACTCATCTATATTAA CCGCATTGC ATC GCAGTGCGG TTTTGCTTTCTACCT TERM 2759 2752022 - 2752042 + F 100 -13.3 -4.62475 | opp_overlap 2752022 ACTCATCTATATTAA CCGCATTGC ATC GCAGTGCGG TTTTGCTTTCTACCT Swoo_2243 2752243 - 2753619 + | hypothetical protein TERM 2760 2753656 - 2753671 + F 83 -5.4 -5.37043 | ATTTTCTATCGGTAA TGACCT TAAC GGGTCA TTTTTTATGTGAAAT Swoo_2244 2753886 - 2755049 + | hypothetical protein TERM 2761 2755617 - 2755600 - g 72 -9.9 -3.27408 | overlap 2755598 CCTCATCGAAAGAGA CTATCGC AGAA GCGATAG AGACGGTTTTTGAGG Swoo_2245 2755269 - 2755925 + | two component LuxR family transcriptional regulator Swoo_2246 2758511 - 2755947 - | PAS/PAC sensor hybrid histidine kinase TERM 2762 2758430 - 2758440 + g 70 -5.4 -4.31164 | CCTCAACACGTTTCA TCAG GAC CTGA TTTATCTTCTCTAAC Swoo_2247 2759652 - 2758504 - | hypothetical protein Swoo_2248 2761673 - 2759730 - | peptidase M16 domain-containing protein TERM 2763 2761296 - 2761324 + g 70 -8.9 -3.16071 | opp_overlap 2761296, overlap 2761294 2761292 AAGCTCAAAATCATA TCTGTTATCACTG GTG CAGTGAAAGCAGG TGTATTCATCTAAGG Swoo_2249 2762785 - 2761670 - | coenzyme PQQ biosynthesis protein E Swoo_2250 2763044 - 2762778 - | coenzyme PQQ synthesis D Swoo_2251 2763793 - 2763044 - | coenzyme PQQ biosynthesis protein C TERM 2764 2763672 - 2763653 - G 71 -7.8 -3.75824 | opp_overlap 2763655 GATCTGATAATAGAA GCGGTTGG CAAC CCAACCTC TGATCTGTTCAACGC Swoo_2252 2764719 - 2763802 - | coenzyme PQQ biosynthesis protein B TERM 2765 2764416 - 2764404 - G 73 -9.1 -3.48269 | overlap 2764406 TGCAGTAAACAGGAA GAGGG AGT CCCTC TCTAAGGGTCAGTAG TERM 2766 2764787 - 2764763 - R 100 -15.1 -5.61596 | opp_overlap 2764763 ATTTTTATAAAAAAA TCCCCACAACC TAA GGTTATGGGGA TTTTTGTTTAACGGT TERM 2767 2764763 - 2764787 + r 100 -12.9 -5.27938 | opp_overlap 2764763 ATTTTTATAAAAAAA TCCCCACAACC TAA GGTTATGGGGA TTTTTGTTTAACGGT Swoo_2253 2767083 - 2764972 - | FMN-binding domain-containing protein TERM 2768 2767169 - 2767195 + r 100 -17.4 -3.80858 | overlap 2767170 AAGCTTTACTATTTT TGGCCCACACAT TTT ATGTGTGGGCCG TTTGCCTTGGTGTTG TERM 2769 2767170 - 2767194 + r 100 -18.7 -2.87792 | overlap 2767169 AGCTTTACTATTTTT GGCCCACACAT TTT ATGTGTGGGCC GTTTGCCTTGGTGTT Swoo_2254 2768743 - 2767223 - | aldehyde dehydrogenase TERM 2770 2769020 - 2768991 - R 100 -13.1 -4.67353 | gap 1, opp_overlap 2768997, overlap 2768997 GCATTGATGCAAAAA TAGAAAGGGCTGTC AGT GACAGCCCTTT-TA CAGGTATGACTTGCT TERM 2771 2768997 - 2769015 + r 100 -14.6 -4.13014 | opp_overlap 2768991 2768997 ATGCAAAAATAGAAA GGGCTGTC AGT GACAGCCC TTTTACAGGTATGAC TERM 2772 2769015 - 2768997 - R 100 -14.6 -4.56791 | opp_overlap 2768997, overlap 2768991 ATGCAAAAATAGAAA GGGCTGTC AGT GACAGCCC TTTTACAGGTATGAC Swoo_2255 2770813 - 2769047 - | methanol/ethanol family PQQ-dependent dehydrogenase TERM 2773 2769322 - 2769344 + g 73 -4.7 -4.82901 | opp_overlap 2769299 2769324, overlap 2769320 2769325 CAGCTGTAGTTAGTA CACCTCCCC AAAGA GGGGAGTAG TTTTTGTAACGCCAG TERM 2774 2769325 - 2769341 + g 74 -9.4 -3.31915 | opp_overlap 2769299 2769324, overlap 2769320 2769322 CTGTAGTTAGTACAC CTCCCC AAAGA GGGGAG TAGTTTTTGTAACGC TERM 2775 2769762 - 2769795 + g 85 -8.9 -4.42081 | gap 1, opp_overlap 2769762, overlap 2769772 AGTACGTAGAAAAAG CCATTACGGTCGGCGG TTG CTGCCG-CTTTAATGG TTTTACCTTTCTCTT Swoo_2256 2771940 - 2771041 - | hypothetical protein Swoo_2257 2772412 - 2771927 - | cytochrome c550 Swoo_2258 2772640 - 2773842 + | hypothetical protein TERM 2776 2774651 - 2774640 - g 71 -4.4 -4.7078 | TTAACTATTGAAAAA TACC TGTT GGTA GGAAGGCGGGTATGG Swoo_2259 2773839 - 2774819 + | YVTN beta-propeller repeat-containing protein Swoo_2260 2774825 - 2775544 + | ABC transporter related Swoo_2261 2775547 - 2776329 + | ABC-2 type transporter Swoo_2262 2776331 - 2777338 + | proline iminopeptidase TERM 2777 2777376 - 2777398 + T 100 -13.4 -5.22289 | opp_overlap 2777376 TTTAGCAAACAAAAA GCGCGACTCA ATG TGAGACGCGC TTTTTCTATTTGCTA TERM 2778 2777398 - 2777376 - T 100 -13.4 -5.33405 | opp_overlap 2777376 TTTAGCAAACAAAAA GCGCGACTCA ATG TGAGACGCGC TTTTTCTATTTGCTA Swoo_2263 2780499 - 2777452 - | TonB-dependent receptor TERM 2779 2779584 - 2779574 - G 71 -4.6 -4.7373 | opp_overlap 2779574 TCATCGTACCAAAAA CCAG AGT CCGG CTTATAACTACTTTT TERM 2780 2780238 - 2780226 - G 73 -6.3 -4.4078 | GCTCCTCAACTAAAA TCTCT GCC AGAGA GCCTAAACCTGTATC TERM 2781 2780936 - 2780906 - R 72 -9.1 -3.34589 | opp_overlap 2780906, overlap 2780904 2780902 TGAATAGTAAATATA CTCTCCCAGTTAA AACGA TAAACTGAGAGAG TTAGATGATTATTTA Swoo_2264 2782334 - 2781000 - | deoxyguanosinetriphosphate triphosphohydrolase Swoo_2265 2783001 - 2782414 - | metal dependent phosphohydrolase Swoo_2266 2783275 - 2783985 + | hypothetical protein TERM 2782 2784004 - 2784029 + T 71 -3.3 -5.02476 | opp_overlap 2783998 2784004 ATAGAAGATTAAAAA GCGACCT GCTTAGCTGCTG AGGTCGC TTTTTTGAAGAGTAT Swoo_2267 2785272 - 2784061 - | aminotransferase class I and II TERM 2783 2785549 - 2785531 - R 100 -14.6 -5.26316 | opp_overlap 2785531 CTAGGGTATAAAAAA GCCAGTGG TGT CCACTGGC TTTTAAACTGAATTT TERM 2784 2785531 - 2785549 + r 100 -14.6 -4.15854 | opp_overlap 2785531 CTAGGGTATAAAAAA GCCAGTGG TGT CCACTGGC TTTTAAACTGAATTT Swoo_2268 2786136 - 2785576 - | translation elongation factor P Swoo_2269 2787359 - 2786181 - | hypothetical protein TERM 2785 2786925 - 2786913 - G 73 -4.9 -4.69027 | AAAGCCAGGGAAAAA GAAAA ACT TTTTC AAACCACTTTTTTGT TERM 2786 2787568 - 2787602 + r 100 -15.9 -3.40309 | opp_overlap 2787559 2787571 2787578, overlap 2787569 2787571 2787578 ACATAAGTGTTCCAG ACACAAAAAAGCGGC ATTAA GCCGCTTTTTTGTGA TTATCCGTGCTTCTA TERM 2787 2787569 - 2787601 + r 100 -19.4 -2.63703 | opp_overlap 2787559 2787571 2787578, overlap 2787568 2787571 2787578 CATAAGTGTTCCAGA CACAAAAAAGCGGC ATTAA GCCGCTTTTTTGTG ATTATCCGTGCTTCT TERM 2788 2787599 - 2787571 - R 100 -16.2 -2.87881 | opp_overlap 2787569 2787568 2787571 2787578, overlap 2787578 TAAGTGTTCCAGACA CAAAAAAGCGGC ATTAA GCCGCTTTTTTG TGATTATCCGTGCTT TERM 2789 2787571 - 2787599 + r 100 -16.2 -2.85484 | opp_overlap 2787571 2787578, overlap 2787569 2787568 2787578 TAAGTGTTCCAGACA CAAAAAAGCGGC ATTAA GCCGCTTTTTTG TGATTATCCGTGCTT TERM 2790 2787578 - 2787592 + r 100 -8.5 -5.39755 | opp_overlap 2787578 2787571, overlap 2787571 2787569 2787568 TCCAGACACAAAAAA GCGGC ATTAA GCCGC TTTTTTGTGATTATC TERM 2791 2787592 - 2787578 - R 100 -8.5 -5.4251 | opp_overlap 2787571 2787569 2787568 2787578, overlap 2787571 TCCAGACACAAAAAA GCGGC ATTAA GCCGC TTTTTTGTGATTATC Swoo_2270 2788152 - 2787625 - | flavodoxin Swoo_2271 2788474 - 2788202 - | CopG/DNA-binding domain-containing protein TERM 2792 2788410 - 2788420 + g 72 -6.8 -4.2074 | overlap 2788408 GGATTACTTCTAGGA CGAC CAC GTCG TTTCTCTGTTGCGAA Swoo_2272 2788707 - 2788486 - | hypothetical protein TERM 2793 2788554 - 2788540 - G 80 -9.2 -4.15044 | TCCCTTTGCAATAAA CCCGGC ACA GCCGAG AAATAACACAAGCCA TERM 2794 2788673 - 2788660 - G 71 -5.3 -4.57073 | GATCGCTGCGAAAAA TAGGT TTAG ACCTA ACGCTTCGATCTGTT Swoo_2273 2789740 - 2788961 - | alpha/beta hydrolase fold TERM 2795 2789254 - 2789270 + g 76 -3.7 -5.14563 | overlap 2789256 TCCACTTAAAGCTCG TTTCATC ACG GGTGAGA TTTTTTAGTAGGAAC Swoo_2274 2790035 - 2790574 + | SeqA family protein TERM 2796 2791816 - 2791826 + G 75 -4.6 -5.02074 | GGTGGCGAAGAGAGT GCTG GTG CGGC TTTTTTACGACGTGA Swoo_2275 2790637 - 2792289 + | phosphoglucomutase, alpha-D-glucose phosphate-specific TERM 2797 2792319 - 2792340 + T 100 -14.5 -5.06816 | TACATATTTTATCGA GCCCCTGTA TTGT TACAGGGGC TTTTTGTTGGAGAAT Swoo_2276 2792845 - 2792366 - | peptide methionine sulfoxide reductase Swoo_2277 2793125 - 2794162 + | succinylglutamate desuccinylase Swoo_2278 2794387 - 2795565 + | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) TERM 2798 2796245 - 2796229 - g 77 -5 -5.02502 | GAGATCATAGAAAAA GCTGCC GATAT GGCTGC AAAAGAGGGGATCTC Swoo_2279 2795569 - 2796546 + | transketolase central region Swoo_2280 2796557 - 2798137 + | dihydrolipoyllysine-residue (2-methylpropanoyl)transferase TERM 2799 2798187 - 2798147 - f 80 -10.8 -3.13033 | gap 1, opp_overlap 2798154 2798160 2798176, overlap 2798160 CAGTAACAGATAAAG TTAGTGATAAAAAGAGCGC TTCG GCGCTCTTTTTAT-ATTAA AAATTGATTTTTTTC TERM 2800 2798154 - 2798181 + F 100 -15.8 -3.07005 | opp_overlap 2798147 2798160, overlap 2798160 2798176 AGATAAAGTTAGTGA TAAAAAGAGCGC TTCG GCGCTCTTTTTA TATTAAAAATTGATT TERM 2801 2798160 - 2798175 + F 93 -10.4 -5.0916 | opp_overlap 2798160 2798147, overlap 2798154 AGTTAGTGATAAAAA GAGCGC TTCG GCGCTC TTTTTATATTAAAAA TERM 2802 2798175 - 2798160 - f 93 -10.4 -4.88067 | opp_overlap 2798154 2798160, overlap 2798147 AGTTAGTGATAAAAA GAGCGC TTCG GCGCTC TTTTTATATTAAAAA Swoo_2281 2798284 - 2799351 + | quinolinate synthetase complex, A subunit TERM 2803 2799398 - 2799432 + F 100 -11.6 -5.06223 | opp_overlap 2799407, overlap 2799400 2799401 2799407 GTAAAAATTGATCTA GATTAAAAAGCCCTCA AAA TGAGGGCTTTTTACTA TTTTATTTACTTTAT TERM 2804 2799400 - 2799430 + F 100 -14.2 -4.12724 | opp_overlap 2799407, overlap 2799398 2799401 2799407 AAAAATTGATCTAGA TTAAAAAGCCCTCA AAA TGAGGGCTTTTTAC TATTTTATTTACTTT TERM 2805 2799401 - 2799429 + F 100 -17.7 -3.05194 | opp_overlap 2799407, overlap 2799400 2799398 2799407 AAAATTGATCTAGAT TAAAAAGCCCTCA AAA TGAGGGCTTTTTA CTATTTTATTTACTT TERM 2806 2799423 - 2799407 - f 100 -12.3 -4.81551 | opp_overlap 2799407 2799401 2799400 2799398 GATCTAGATTAAAAA GCCCTCA AAA TGAGGGC TTTTTACTATTTTAT TERM 2807 2799407 - 2799423 + F 100 -12.3 -4.99972 | opp_overlap 2799407, overlap 2799401 2799400 2799398 GATCTAGATTAAAAA GCCCTCA AAA TGAGGGC TTTTTACTATTTTAT TERM 2808 2800859 - 2800829 - g 86 -13.4 -3.12606 | overlap 2800821 2800817 2800839 GGAGATAGCACTTAA TGCTGTCAAAGCTT CTG AAGCTTCGACAGCT GCCAATATAGAAGCC Swoo_2282 2799510 - 2801504 + | methyl-accepting chemotaxis sensory transducer TERM 2809 2801532 - 2801551 + F 91 -8.5 -5.06414 | opp_overlap 2801532 TAGATCTACCAACAA GCCCTGC ATAAAA GCGGGGC TTTTTGTTAGCGCAG TERM 2810 2802101 - 2802089 - g 79 -4.1 -5.28983 | TTCAAAATAGAAAAA TCACC TTA GATGA AAATGGCAAAGGTTT Swoo_2283 2801758 - 2802279 + | hypothetical protein Swoo_2284 2802293 - 2803138 + | hypothetical protein Swoo_2285 2804391 - 2803489 - | putative hydrolase TERM 2811 2804536 - 2804559 + r 73 -6.8 -4.24534 | opp_overlap 2804536 TAGCCCGCAATATCA TTCAGGTTTG AAAT TAAACCTGGA TTTATCTATTAGTTC Swoo_2286 2806052 - 2804568 - | hypothetical protein TERM 2812 2806199 - 2806181 - R 100 -8.8 -5.43487 | overlap 2806182 AAATGATAGAAAAAA TGGGGTAC TAA GTACCCCT AACGCCCAAGTGATG TERM 2813 2806198 - 2806182 - R 90 -12.3 -3.83652 | overlap 2806181 AATGATAGAAAAAAT GGGGTAC TAA GTACCCC TAACGCCCAAGTGAT Swoo_2289 2809766 - 2808810 - | transposase IS111A/IS1328/IS1533 TERM 2814 2810980 - 2810959 - R 93 -10.9 -4.98531 | opp_overlap 2810959 TGCTGAAACGAAAAA GGCCTAACA TCTC TGCTAGGCC TTAATCTAAATATGG TERM 2815 2810959 - 2810980 + r 72 -8.7 -3.28912 | opp_overlap 2810959 TGCTGAAACGAAAAA GGCCTAACA TCTC TGCTAGGCC TTAATCTAAATATGG TERM 2816 2811128 - 2811154 + r 70 -7.5 -3.57792 | overlap 2811129 TCACGTTAAAACTGC TTTATCTCTAT ATAAC ATAGAGATAAG TTTGGAAATCGCTAA Swoo_2290 2812781 - 2811324 - | phospholipase D/transphosphatidylase TERM 2817 2811764 - 2811775 + g 77 -4.4 -5.10154 | GAACAAAGTAGGGGG TCGT GATA ACGA TTTTTGATTTTGCCT TERM 2818 2812015 - 2812029 + g 80 -6.4 -4.86731 | overlap 2812010 ATCACATCGACCCAC TGTCCA ACA TGGGCA TTTTGTTTGAAAAAG TERM 2819 2813365 - 2813387 + G 80 -10.6 -3.41051 | overlap 2813368 2813371 ATGAACTTGGCCAAT GTGCAAGCAG AGT CTGCTTGTGC TTATCATGCAACTGA TERM 2820 2813368 - 2813384 + G 75 -10.9 -2.86271 | overlap 2813365 2813371 AACTTGGCCAATGTG CAAGCAG AGT CTGCTTG TGCTTATCATGCAAC Swoo_2291 2812963 - 2813820 + | endonuclease/exonuclease/phosphatase Swoo_2292 2813880 - 2815817 + | ATP-dependent DNA helicase RecQ TERM 2821 2816609 - 2816598 - g 84 -4.4 -5.37043 | ACTGCAGAGAAAAAA CTGT TTGA ACAG CGGTTTAATGCATCA Swoo_2293 2815938 - 2817713 + | hypothetical protein TERM 2822 2817759 - 2817775 + F 100 -8 -5.43414 | opp_overlap 2817759 GTCACTTTCACTAAA GCCAGA CTCGT TCTGGC TTTTTTATCTCTGAT TERM 2823 2817775 - 2817759 - f 72 -8 -3.73775 | opp_overlap 2817759 GTCACTTTCACTAAA GCCAGA CTCGT TCTGGC TTTTTTATCTCTGAT Swoo_2294 2817923 - 2818603 + | two component transcriptional regulator Swoo_2295 2818747 - 2819874 + | peptidase M14 carboxypeptidase A TERM 2824 2819879 - 2819931 + F 90 -11.5 -4.15565 | opp_overlap 2819879 2819878 ACTTACGATAATAAC GGTGTGTGACTAACTTAGGCTAGTT TTG AACTAGTGTGGATTAGTCACACAGC TTTTGAGGTAATACG Swoo_2296 2819947 - 2820264 + | hypothetical protein Swoo_2297 2820261 - 2820545 + | hypothetical protein TERM 2825 2820567 - 2820586 + T 71 -9.3 -2.72043 | opp_overlap 2820560, overlap 2820566 2820569 CTTATTAAGCGCATC GAGCAGC ACTATG GCTGCTC ATTTACGCAACAGTT Swoo_2298 2821627 - 2820614 - | L-asparaginase, type I TERM 2826 2821543 - 2821569 + g 73 -2.9 -5.09895 | gap 1, opp_overlap 2821542 AGTTTGTAAGAAAAC CAGCAACGGGGG CAAA CCCTTGA-GCTG TTTTTTGCATGCCTA TERM 2827 2821762 - 2821737 - R 100 -16.1 -5.67967 | opp_overlap 2821737 ATCAGCATAAAAAAA GCCCGCTGAGC GGAA GCTCTGCGGGC TTAGTCAATTAATCC TERM 2828 2821737 - 2821762 + r 100 -16.1 -3.22884 | opp_overlap 2821737 ATCAGCATAAAAAAA GCCCGCTGAGC GGAA GCTCTGCGGGC TTAGTCAATTAATCC Swoo_2299 2823653 - 2821812 - | signal peptide peptidase SppA, 67K type TERM 2829 2822531 - 2822520 - G 70 -7.2 -3.90112 | CTGCTCGGAAGCAAA GGCG CTTC CGCC TGGACTATCGACTCG TERM 2830 2823749 - 2823716 - H 90 -11.3 -4.67353 | CGATTTAGGGAAAAA TCAATTGTAAAGGAA TCTG TTGCTTTACAATTGA ACAACTAGTTGAGCT TERM 2831 2824667 - 2824654 - g 74 -3.1 -5.09895 | GAGCGACTCAAAAAA GAGAT GAAT ATCCC GCTTGTGGCAACCAA Swoo_2300 2823820 - 2825835 + | NADH:flavin oxidoreductase/NADH oxidase TERM 2832 2825891 - 2825911 + T 83 -5.4 -5.5074 | opp_overlap 2825891 AGATAATACAAAAAA GGACCGAT TATTC ATCGCTCC TTTTTTATTGACTTC TERM 2833 2825911 - 2825891 - T 86 -5.4 -5.53436 | opp_overlap 2825891 AGATAATACAAAAAA GGACCGAT TATTC ATCGCTCC TTTTTTATTGACTTC Swoo_2301 2826345 - 2825968 - | ferredoxin TERM 2834 2826047 - 2826063 + g 72 -9.5 -3.17392 | TTTTCTTCGCGTTTA GGTGTAA GGG TTACACC TTGAGTTGGCAGCTC Swoo_2302 2827465 - 2826335 - | ribonucleoside-diphosphate reductase TERM 2835 2827342 - 2827329 - G 74 -2.4 -5.24129 | GGGCGCCAGAAAAAA GAGA GTTGTT TCTC AATTAGCTTTTCAAA TERM 2836 2827542 - 2827515 - R 72 -7 -4.03474 | opp_overlap 2827517 2827519, overlap 2827517 2827519 ATTAAAAATTAATAA CACACTCAGTGC CAAC GCACTGAGTCTT GATACACCTTGTTAG TERM 2837 2827517 - 2827540 + r 74 -9.6 -3.17486 | opp_overlap 2827517 2827515 2827519, overlap 2827519 TAAAAATTAATAACA CACTCAGTGC CAAC GCACTGAGTC TTGATACACCTTGTT TERM 2838 2827540 - 2827517 - R 78 -9.6 -3.58785 | opp_overlap 2827517 2827519, overlap 2827515 2827519 TAAAAATTAATAACA CACTCAGTGC CAAC GCACTGAGTC TTGATACACCTTGTT TERM 2839 2827519 - 2827538 + r 87 -12.2 -3.14527 | opp_overlap 2827519 2827517 2827515, overlap 2827517 AAAATTAATAACACA CTCAGTGC CAAC GCACTGAG TCTTGATACACCTTG TERM 2840 2827538 - 2827519 - R 89 -12.2 -3.33839 | opp_overlap 2827517 2827519, overlap 2827517 2827515 AAAATTAATAACACA CTCAGTGC CAAC GCACTGAG TCTTGATACACCTTG Swoo_2303 2829842 - 2827554 - | ribonucleoside-diphosphate reductase, alpha subunit TERM 2841 2828867 - 2828880 + g 79 -6.7 -4.68593 | opp_overlap 2828858 GAATACGGTTATCTT CAACC CCTC GGTTG TTTTTAAGTACTAAC TERM 2842 2829970 - 2829958 - R 76 -2.7 -5.47218 | TTTCATCTAAAAAAA TAGAA GGT CTCTA GTGTCTCTGACTGTT TERM 2843 2830115 - 2830132 + r 70 -7.7 -3.55203 | opp_overlap 2830115 GAGGATAAAAAAAAG GGTGAGC GAAG GCTTACC TTTAAAGACCATTTT TERM 2844 2830253 - 2830217 - R 75 -8.1 -3.72576 | opp_overlap 2830210, overlap 2830218 TTTGGCTGGATCAAA TGGTGATCTTTTGGATC TTA GACTCAAAAAATCACCT AGAGAAAAATAGATT TERM 2845 2830252 - 2830218 - R 81 -11.6 -2.83403 | opp_overlap 2830210, overlap 2830217 TTGGCTGGATCAAAT GGTGATCTTTTGGATC TTA GACTCAAAAAATCACC TAGAGAAAAATAGAT Swoo_2304 2830959 - 2830267 - | HAD family hydrolase Swoo_2305 2831729 - 2830959 - | ubiquinone biosynthesis O-methyltransferase TERM 2846 2831890 - 2831880 - H 76 -4 -5.24129 | TCTGGCGACAAAAAA TAAC TGT GTTA GAATGCCAAATCACG Swoo_2306 2831982 - 2834699 + | DNA gyrase, A subunit TERM 2847 2834728 - 2834749 + F 100 -17.3 -5.08878 | opp_overlap 2834728 TAAGGAATAGATTAA CGGGCGTCC AAAT GGACGCCCG TTTTGTTTCTCTCTT TERM 2848 2834749 - 2834728 - f 100 -17.3 -3.40022 | opp_overlap 2834728 TAAGGAATAGATTAA CGGGCGTCC AAAT GGACGCCCG TTTTGTTTCTCTCTT Swoo_2307 2834929 - 2836023 + | phosphoserine aminotransferase TERM 2849 2836059 - 2836035 - T 100 -13 -4.7416 | opp_overlap 2836035 TTAAAAGTTGAAAAA GTTCCTAGGA TCTGG TCCTAGGAAC TTATCATCGCAAACT TERM 2850 2836035 - 2836059 + T 100 -13.7 -3.40522 | opp_overlap 2836035 TTAAAAGTTGAAAAA GTTCCTAGGAT CTG GTCCTAGGAAC TTATCATCGCAAACT Swoo_2308 2837281 - 2836076 - | aspartate transaminase Swoo_2309 2837738 - 2839018 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2851 2839055 - 2839084 + F 100 -16.7 -4.7173 | ATAACACTCTATCCT GTTTCAGGCTAAT AGCA ATTAGCCTGAAAC TTTTTACCTCTCCTG Swoo_2310 2839521 - 2840213 + | cytidylate kinase Swoo_2311 2840316 - 2841983 + | ribosomal protein S1 TERM 2852 2841997 - 2842016 + F 87 -12.2 -3.09759 | opp_overlap 2841997, overlap 2842008 2842014 AATTCGCCTGAAGTA CTGAGGTG CTTG CACCTCAG TTAGGTGACTGTGTT TERM 2853 2842016 - 2841997 - f 85 -12.2 -2.71263 | opp_overlap 2841997 2842008 2842014 AATTCGCCTGAAGTA CTGAGGTG CTTG CACCTCAG TTAGGTGACTGTGTT Swoo_2312 2842056 - 2842343 + | integration host factor, beta subunit TERM 2854 2842376 - 2842361 - f 85 -10.4 -4.13282 | opp_overlap 2842361 2842374, overlap 2842374 AGCATAGTTTCAAAA GCCTCC GAAT GGAGGC TTTTTTATGCCTATA TERM 2855 2842361 - 2842376 + F 100 -10.4 -5.29782 | opp_overlap 2842361 2842374, overlap 2842374 AGCATAGTTTCAAAA GCCTCC GAAT GGAGGC TTTTTTATGCCTATA TERM 2856 2842485 - 2842501 + G 87 -5.1 -5.38958 | AGTCTTTTATCATTA CAGTGTT AGT GGCACTG TTTTTCTTTCTGGCT Swoo_2313 2842466 - 2842756 + | hypothetical protein TERM 2857 2843269 - 2843254 - g 70 -5.4 -4.35461 | TCAACATCATTAAAA CGCTTA AACG CAAGCG TCAGCAGTGTTTTAA Swoo_2314 2842758 - 2843918 + | tetratricopeptide domain-containing protein Swoo_2315 2844015 - 2844716 + | orotidine 5'-phosphate decarboxylase Swoo_2316 2844719 - 2845261 + | hypothetical protein TERM 2858 2845292 - 2845313 + T 100 -10.3 -5.61881 | opp_overlap 2845292 AAGATTAACGAAAAA GGATATTCA TTGC TGAATATCC TTTTTCTTTTTAGCC TERM 2859 2845313 - 2845292 - T 93 -10.3 -4.92777 | opp_overlap 2845292 AAGATTAACGAAAAA GGATATTCA TTGC TGAATATCC TTTTTCTTTTTAGCC Swoo_2317 2845671 - 2845333 - | hypothetical protein TERM 2860 2845390 - 2845411 + g 73 -2.9 -5.04325 | overlap 2845393 AACTAAACGATACTC GCCGTTTGC TTTT GCAAACTCC TTTTTATAGTTTAGA Swoo_2318 2847832 - 2845688 - | hypothetical protein Swoo_2319 2849303 - 2847948 - | hypothetical protein Swoo_2320 2851147 - 2849327 - | hypothetical protein TERM 2861 2851737 - 2851747 + G 70 -5.4 -4.30014 | opp_overlap 2851737 AATAGGCACGCAAAG GTTC GTC GAAC TTTTGGATTACTGCA Swoo_2321 2851585 - 2852628 + | AraC family transcriptional regulator Swoo_2322 2852857 - 2854428 + | AMP-dependent synthetase and ligase TERM 2862 2854504 - 2854525 + F 72 -8.9 -3.27704 | overlap 2854500 CCATTTTTTGGTGTA GATTAAAAC AACT GTTTTAATC TTACGTTTGAGAAAT Swoo_2323 2854545 - 2856302 + | acyl-CoA dehydrogenase domain-containing protein TERM 2863 2856368 - 2856405 + T 91 -12.9 -3.14132 | opp_overlap 2856374 2856378, overlap 2856370 2856372 2856378 TAGACATAAATGTTC CAGACATAAAGGCGAAC CTAG GTTCGCCTTTATGTATA TTAGTGGGAAAGGGA TERM 2864 2856370 - 2856403 + T 100 -15.5 -3.13403 | opp_overlap 2856374 2856378, overlap 2856368 2856372 2856378 GACATAAATGTTCCA GACATAAAGGCGAAC CTAG GTTCGCCTTTATGTA TATTAGTGGGAAAGG TERM 2865 2856372 - 2856401 + T 100 -18.1 -3.12895 | opp_overlap 2856374 2856378, overlap 2856370 2856368 2856378 CATAAATGTTCCAGA CATAAAGGCGAAC CTAG GTTCGCCTTTATG TATATTAGTGGGAAA TERM 2866 2856399 - 2856374 - T 100 -14.9 -2.89055 | opp_overlap 2856372 2856370 2856368 2856378, overlap 2856378 TAAATGTTCCAGACA TAAAGGCGAAC CTAG GTTCGCCTTTA TGTATATTAGTGGGA TERM 2867 2856378 - 2856395 + T 88 -11.3 -4.21945 | opp_overlap 2856378 2856374, overlap 2856372 2856370 2856368 TGTTCCAGACATAAA GGCGAAC CTAG GTTCGCC TTTATGTATATTAGT TERM 2868 2856395 - 2856378 - T 86 -11.3 -4.12532 | opp_overlap 2856372 2856370 2856368 2856378, overlap 2856374 TGTTCCAGACATAAA GGCGAAC CTAG GTTCGCC TTTATGTATATTAGT Swoo_2324 2857851 - 2856406 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Swoo_2325 2858134 - 2857964 - | hypothetical protein Swoo_2326 2858372 - 2858704 + | hypothetical protein Swoo_2327 2858715 - 2860028 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 2869 2860085 - 2860067 - f 91 -8.8 -5.12617 | opp_overlap 2860068, overlap 2860068 CAATTATTGAAAAAA TGCGAGGA TTA TCCTCGCT TTTTTATGTCTGGAA TERM 2870 2860084 - 2860068 - f 90 -12.3 -3.66486 | opp_overlap 2860068, overlap 2860067 AATTATTGAAAAAAT GCGAGGA TTA TCCTCGC TTTTTTATGTCTGGA TERM 2871 2860068 - 2860084 + F 100 -12.3 -5.4251 | opp_overlap 2860068 2860067 AATTATTGAAAAAAT GCGAGGA TTA TCCTCGC TTTTTTATGTCTGGA Swoo_2328 2860139 - 2860414 + | hypothetical protein Swoo_2329 2861757 - 2860531 - | major facilitator transporter Swoo_2330 2862165 - 2862914 + | DTW domain-containing protein Swoo_2331 2863213 - 2863443 + | hypothetical protein TERM 2872 2864106 - 2864129 + G 77 -3.2 -5.28983 | gap 1, opp_overlap 2864107 2864109, overlap 2864107 CAGCTCCAATAGATG AGATCAACGAG ATA CT-GTTGATCA TTTTTCTCTTTTCCG Swoo_2332 2863433 - 2865445 + | integral membrane sensor hybrid histidine kinase Swoo_2333 2865560 - 2865802 + | hypothetical protein Swoo_2334 2868224 - 2866248 - | oxidoreductase FAD/NAD(P)-binding subunit Swoo_2335 2868961 - 2868221 - | hypothetical protein Swoo_2336 2870658 - 2869366 - | homogentisate 1,2-dioxygenase TERM 2873 2869520 - 2869530 + g 77 -6.8 -4.57073 | opp_overlap 2869520 TGTGGCGCCAATTCA GCGT TGG ACGC TTTTTCAAAGACCTC Swoo_2337 2870866 - 2871360 + | MarR family transcriptional regulator TERM 2874 2873230 - 2873215 - g 70 -6.1 -4.27259 | GATAGACAGTTAAAA GGCCA ACAAAA TGGCC TAAATGATATGACAG Swoo_2338 2871655 - 2873664 + | hypothetical protein TERM 2875 2873754 - 2873742 - g 77 -9.1 -3.84451 | GCTGTTAAATCTAAA CAGCC AAC GGCTG AAGAGCTTGAGTTCT Swoo_2339 2873679 - 2874344 + | GAD-like domain-containing protein Swoo_2340 2875353 - 2874967 - | hypothetical protein Swoo_2341 2875762 - 2875355 - | NAD-dependent epimerase/dehydratase Swoo_2342 2876254 - 2875781 - | hypothetical protein TERM 2876 2876212 - 2876178 - G 100 -3.4 -5.82172 | ATGAACATAAAAAAA GCGATGCCTGTCCCCG TGC CAGTGACAACTACCGC GGCAATAATATGAAT Swoo_2343 2877417 - 2876287 - | saccharopine dehydrogenase TERM 2877 2876900 - 2876916 + g 71 -5.1 -4.49556 | ATCCCTTCAATAGTT GCTAAAC CCC GTTCAGC TTTATTTCCTGGAGC TERM 2878 2877101 - 2877085 - G 78 -6.5 -4.61852 | overlap 2877087 AATATCACAAACAAA TCGCCGA TCA TCGGCTA AGTCAATATAATGAG TERM 2879 2879757 - 2879767 + G 76 -8.2 -4.19276 | overlap 2879764 2879765 TGGCGTGTTCTACAT GCGC GCA GCGC TTTTAGCGGTTTTCG Swoo_2344 2878752 - 2879867 + | gamma-butyrobetaine dioxygenase Swoo_2345 2879855 - 2880868 + | threonine aldolase Swoo_2346 2880882 - 2882225 + | amino acid permease-associated region TERM 2880 2883070 - 2883055 - g 70 -9 -3.21912 | TTTTTAACGGAGCAA CACTGG ACAC CCAGTG CACTGTTAAAAGATA Swoo_2347 2882503 - 2883408 + | hypothetical protein TERM 2881 2883456 - 2883412 - T 74 -5.2 -4.93547 | gap 1, opp_overlap 2883413 2883417, overlap 2883413 TTAATGAAGTAAAAA GCAGATAGCAGTAATAACCTC TTGC AAGGCTATTAC-GCTATTTGT TCGTTCTGCTTATTG TERM 2882 2883455 - 2883413 - T 74 -8.7 -3.55043 | gap 1, opp_overlap 2883413 2883417, overlap 2883412 TAATGAAGTAAAAAG CAGATAGCAGTAATAACCTC TTGC AAGGCTATTAC-GCTATTTG TTCGTTCTGCTTATT Swoo_2348 2884407 - 2883481 - | hypothetical protein TERM 2883 2883718 - 2883730 + g 73 -9.1 -3.43338 | overlap 2883714 GTTTGACTGTGTGGG CGCAG CCC CTGCG TTGCTTGGTATACCT Swoo_2349 2885167 - 2884490 - | diguanylate phosphodiesterase TERM 2884 2885076 - 2885061 - G 70 -6.2 -4.29738 | GGATATCGATTAAAA GTATCT AGGG AGATAC CGTTAAACTCCCGTA Swoo_2350 2885661 - 2885308 - | hypothetical protein TERM 2885 2885721 - 2885741 + r 80 -7.5 -4.431 | opp_overlap 2885724, overlap 2885724 CATGCAGGTTGTAGG GAAGGTCGG TTG CTGACCTAC TTTTGTGAATACATG Swoo_2351 2886047 - 2885700 - | hypothetical protein TERM 2886 2886093 - 2886126 + r 70 -9.1 -3.08464 | gap 1, opp_overlap 2886096 2886098, overlap 2886097 AATTAGATAACCAGA TAAGATTGAGACCTAT AAA ATAGGTCTCAA-CTAA TTAGCTAGATGGTAC TERM 2887 2886123 - 2886096 - R 83 -10.8 -3.63715 | gap 1, opp_overlap 2886093 2886097, overlap 2886098 TAGATAACCAGATAA GATTGAGACCTAT AAA ATAGGTCTCAA-C TAATTAGCTAGATGG TERM 2888 2886097 - 2886123 + r 78 -11 -2.75712 | opp_overlap 2886096 2886098, overlap 2886093 AGATAACCAGATAAG ATTGAGACCTAT AAA ATAGGTCTCAAC TAATTAGCTAGATGG TERM 2889 2886122 - 2886098 - R 100 -14.5 -3.38671 | opp_overlap 2886097 2886093, overlap 2886096 GATAACCAGATAAGA TTGAGACCTAT AAA ATAGGTCTCAA CTAATTAGCTAGATG Swoo_2352 2886772 - 2886152 - | hypothetical protein Swoo_2353 2887441 - 2886821 - | hypothetical protein Swoo_2354 2888005 - 2887496 - | hypothetical protein Swoo_2355 2888871 - 2888251 - | hypothetical protein TERM 2890 2888452 - 2888471 + g 72 -3.5 -4.88918 | GGGTTTAAATACTGC GCTTTGG CCATAA CCAACGC TTTTCTTTCCCATAA TERM 2891 2888796 - 2888827 + g 79 -3 -5.38054 | overlap 2888797 2888798 TAAATGTGGAAATAT TGTTCTCAGCAGTA ATAA TAATGCTGGGAAGG TTTTTATTTGTAGAG Swoo_2356 2889505 - 2888885 - | hypothetical protein Swoo_2357 2890153 - 2889581 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2892 2889781 - 2889809 + g 88 -11.9 -3.50302 | overlap 2889778 TAGAATTCATTTCTG CCTTATTGTTGAA AGG TTCATCAATAAGG TTACTATTATTATTC TERM 2893 2890174 - 2890203 + r 83 -11.7 -3.18088 | gap 1, opp_overlap 2890181, overlap 2890173 2890171 2890170 ATTCCTTGTATAGTG GGGATAA-TGATAG AAT CTATCAGTTATCCC TCTCGTTTCTTTTGA Swoo_2358 2890960 - 2890256 - | AraC family transcriptional regulator TERM 2894 2891223 - 2891203 - R 100 -8.3 -5.24515 | opp_overlap 2891203 AAGAAATAAAGAAAA GGCTTAGCA AAA CGCTAAACC TTCTTAGTGGTGATG Swoo_2359 2892552 - 2891272 - | peptidase S8 and S53 subtilisin kexin sedolisin Swoo_2360 2893170 - 2894231 + | PepSY-associated TM helix domain-containing protein TERM 2895 2894327 - 2894385 + T 72 -9.29999 -2.85109 | gap 2, overlap 2894318 2894329 TTAATGGAGCATATG TTCATATTGTGCATCTATGAGCTATAAAC CTA GTTTATAGCTCATAGA-GCA-ACCAAGAA TGGTCTTATATGTAT Swoo_2361 2895209 - 2894466 - | hypothetical protein TERM 2896 2894647 - 2894661 + g 79 -2.8 -5.4477 | overlap 2894655 ATCAAGTGATGTAAT TTGACG TAG CGTGAA TTTTTTTCGCACTTT TERM 2897 2894797 - 2894821 + g 71 -2.1 -5.16132 | opp_overlap 2894798, overlap 2894798 CGACCTAGCAAAACA TCATCGAAGAA TGC TTGTACGATGG TTTTGTTTTCATCTG Swoo_2362 2896438 - 2895566 - | AraC family transcriptional regulator TERM 2898 2896193 - 2896208 + g 90 -9 -4.59773 | GCTACGATACTTCTG CCAAGC ATGT GCTTGG TTTTTACCAATAAAG TERM 2899 2896295 - 2896317 + g 76 -6.5 -4.58283 | opp_overlap 2896295 TCCCTCTACGATGAA TATTACAAT ATAAA ATTGTAATA TTTTTGAACGAGTTA TERM 2900 2898700 - 2898673 - g 74 -7.1 -4.18018 | opp_overlap 2898672 2898677 TGCTGCTATTGAAAA GATAGAGGAGT CACTTT ACTACTCTATC ATCACTTATGGAGAT Swoo_2363 2896691 - 2899777 + | hypothetical protein TERM 2901 2899795 - 2899813 + F 73 -7.4 -4.19336 | TCTTTCATAGAGTGT TGGAGCTG TCA TGGCTCCA TTTATTCGAATACTT Swoo_2364 2900055 - 2901299 + | metal dependent phosphohydrolase Swoo_2365 2902442 - 2901354 - | choloylglycine hydrolase Swoo_2366 2902830 - 2903177 + | DGPFAETKE family protein TERM 2902 2903238 - 2903262 + F 76 -10.1 -3.07043 | opp_overlap 2903224 AGTTGGTCTCACTAC TGTCGCATC GAGTTGG GATGCGACA TATTGAGATGATCGA Swoo_2367 2903255 - 2904433 + | RNA polymerase sigma 70 family subunit TERM 2903 2904439 - 2904472 + T 100 -14.1 -3.26531 | gap 1, opp_overlap 2904439 2904445, overlap 2904445 AGGGCAGTAAATAGA CCAA-AATGCCAGTCG AGA TGACTGGCATTGTTGG TGTTGGTGTTAATGC TERM 2904 2904472 - 2904439 - T 100 -13.4 -3.29972 | gap 1, opp_overlap 2904439 2904445, overlap 2904445 AGGGCAGTAAATAGA CCAA-AATGCCAGTC GAGAT GACTGGCATTGTTGG TGTTGGTGTTAATGC TERM 2905 2904465 - 2904445 - T 90 -11.2 -4.46493 | opp_overlap 2904445 2904439, overlap 2904439 GTAAATAGACCAAAA TGCCAGTC GAGAT GACTGGCA TTGTTGGTGTTGGTG TERM 2906 2904445 - 2904465 + T 90 -11.9 -3.83155 | opp_overlap 2904439 2904445, overlap 2904439 GTAAATAGACCAAAA TGCCAGTCG AGA TGACTGGCA TTGTTGGTGTTGGTG Swoo_2368 2905822 - 2904497 - | amidohydrolase TERM 2907 2905272 - 2905227 - G 86 -13.5 -2.62616 | gap 1, opp_overlap 2905241, overlap 2905241 2905263 CCATCGGCGACACCA CCAGCGATCGATAACTTCTCAG GGG CTGAGAAGTTATCG-TCACAGT GACCACCTGTGATAC TERM 2908 2905241 - 2905259 + g 85 -11.8 -3.41051 | opp_overlap 2905241 2905227 ACCAGCGATCGATAA CTTCTCAG GGG CTGAGAAG TTATCGTCACAGTGA TERM 2909 2905259 - 2905241 - G 85 -11.8 -3.37056 | opp_overlap 2905241, overlap 2905227 ACCAGCGATCGATAA CTTCTCAG GGG CTGAGAAG TTATCGTCACAGTGA TERM 2910 2905971 - 2905951 - R 91 -14.1 -2.57781 | overlap 2905947 GAAATACTGAAGCTA TCCGAGCTT GAA AAGCTCGGA GTGGGGGATATAGCT Swoo_2369 2906217 - 2905996 - | signal transduction protein TERM 2911 2906257 - 2906276 + r 72 -7.2 -3.90318 | GTTATGTCCCATTTA GGGAAAAC TGCT GTTTTCTC TTTATACAATAGTAA TERM 2912 2906396 - 2906357 - R 100 -13.8 -5.50723 | gap 1, opp_overlap 2906367 2906368 TGACTAAAATAAAAA GGCCAAAGT-ACTCGCTCT TTA AGAATGAGTGACTTTGGCC TTAGGCTGCAGTTAA Swoo_2370 2908018 - 2906408 - | ABC transporter related TERM 2913 2908207 - 2908175 - R 100 -13.6 -3.22298 | gap 1, opp_overlap 2908171 2908170 2908165 2908175, overlap 2908177 TTGACTGACGATTAA TAC-ATGCCGCCCAT CAAT ATGGGCGGCATGGCA TACGTTAATTTGATG TERM 2914 2908175 - 2908207 + r 81 -11.4 -2.64134 | gap 1, opp_overlap 2908175 2908177, overlap 2908171 2908170 2908165 TTGACTGACGATTAA TAC-ATGCCGCCCAT CAAT ATGGGCGGCATGGCA TACGTTAATTTGATG TERM 2915 2908204 - 2908177 - R 100 -20 -3.17527 | opp_overlap 2908175 2908171 2908170 2908165, overlap 2908175 GACTGACGATTAATA CATGCCGCCCAT CAAT ATGGGCGGCATG GCATACGTTAATTTG Swoo_2371 2909864 - 2908212 - | hypothetical protein Swoo_2372 2910056 - 2910538 + | hypothetical protein TERM 2916 2910575 - 2910610 + F 100 -15.8 -4.25848 | opp_overlap 2910590 ATATTGACTCATTCA TTATCCTGCAATAAAG CAAT TTTTATTGCAGGATAA TTTTACTCAAGGGTT TERM 2917 2911006 - 2911039 + F 74 -6.3 -4.60977 | opp_overlap 2911006 TTTGTGCTGAAATAT TAATTCATCTAATTA CAAG TAGTTACATGAATTA TTTTATAGTTATATT Swoo_2373 2911268 - 2913154 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 2918 2913176 - 2913194 + F 100 -14.6 -5.63645 | opp_overlap 2913176 TCGATCTCCCTATAA GCAGAGCC TAT GGCTCTGC TTTTTTATATTTTAA TERM 2919 2913194 - 2913176 - f 100 -14.6 -3.29511 | opp_overlap 2913176 TCGATCTCCCTATAA GCAGAGCC TAT GGCTCTGC TTTTTTATATTTTAA TERM 2920 2913408 - 2913421 + F 73 -6.7 -4.21607 | AAGACTCATCTTTAG CCTGA AGCT TCAGG TTTATCTTAAATGAC TERM 2921 2913966 - 2913955 - g 71 -2.2 -5.03747 | AAATTTCTTAAAAAA GCGA TGCA TCAC GATCCTTTAGGCGAT Swoo_2374 2913448 - 2914029 + | GCN5-related N-acetyltransferase Swoo_2375 2915544 - 2914030 - | integral membrane sensor signal transduction histidine kinase Swoo_2376 2916224 - 2915550 - | hypothetical protein Swoo_2377 2916540 - 2916211 - | blue (type1) copper domain-containing protein Swoo_2378 2917593 - 2916553 - | cytochrome-c peroxidase Swoo_2379 2918673 - 2917735 - | hypothetical protein TERM 2922 2918343 - 2918367 + g 93 -2.7 -5.76237 | overlap 2918345 GTTGATTGCGATATA CATGGATGGCG AAA CTTCGTCCAAG TTTTTTGTTTGTATG Swoo_2380 2918915 - 2919631 + | pseudouridine synthase Swoo_2381 2919953 - 2922532 + | peptidase M1 membrane alanine aminopeptidase TERM 2923 2922566 - 2922586 + T 100 -11.2 -5.55769 | opp_overlap 2922566 TGATTAGCAATATAA GCGAAGCT GATCA AGCTTCGC TTTTTTCTTCTACAA TERM 2924 2922586 - 2922566 - T 84 -11.2 -3.72742 | opp_overlap 2922566 TGATTAGCAATATAA GCGAAGCT GATCA AGCTTCGC TTTTTTCTTCTACAA TERM 2925 2922701 - 2922677 - T 74 -8.7 -3.58779 | opp_overlap 2922684, overlap 2922673 2922684 AAGAATTTAAACCAA GATATAATGGT TGC ACCATTTTATC GGGATGAAAATGAAT Swoo_2382 2923823 - 2922759 - | integrase family protein TERM 2926 2923919 - 2923965 + H 91 -12.7 -3.05384 | gap 1, opp_overlap 2923923 2923925, overlap 2923923 TATACCTTTAATTAC TTAATAC-CTACCAGTGATAAT CGTC ATTATCACTGGTAGAGTATCGA TTAAATAAAAAAACA TERM 2927 2923961 - 2923923 - H 100 -15.7 -3.13164 | gap 1, opp_overlap 2923923 2923919, overlap 2923925 CCTTTAATTACTTAA TAC-CTACCAGTGATAAT CGTC ATTATCACTGGTAGAGTA TCGATTAAATAAAAA TERM 2928 2923923 - 2923961 + H 100 -15.7 -2.54896 | gap 1, opp_overlap 2923923 2923925, overlap 2923919 CCTTTAATTACTTAA TAC-CTACCAGTGATAAT CGTC ATTATCACTGGTAGAGTA TCGATTAAATAAAAA TERM 2929 2923958 - 2923925 - H 100 -16.3 -3.12595 | opp_overlap 2923923 2923919, overlap 2923923 TTTAATTACTTAATA CCTACCAGTGATAAT CGTC ATTATCACTGGTAGA GTATCGATTAAATAA TERM 2930 2924241 - 2924251 + H 72 -5.4 -4.57755 | opp_overlap 2924241 TTTACTTTAAATCTA TGGT TAC ACCA TTTTATATGGTAAGT Swoo_2383 2924454 - 2924957 + | hypothetical protein Swoo_2384 2926204 - 2925197 - | hypothetical protein TERM 2931 2925328 - 2925314 - G 83 -5.6 -5.31456 | opp_overlap 2925314 CCAAGCCACAAAAAA GAGAGG GCG CCACTC TTCAATAATTTCACA TERM 2932 2925552 - 2925534 - G 71 -4.6 -4.63928 | overlap 2925543 AGATCAGCTGAAAAA CAGAAGTT AGC AACTTTTG CATCTCCATGGATTA Swoo_2385 2926321 - 2926671 + | putative orphan protein Swoo_2386 2926716 - 2927411 + | short-chain dehydrogenase/reductase SDR Swoo_2387 2928498 - 2927437 - | hypothetical protein Swoo_2388 2928652 - 2929206 + | GCN5-related N-acetyltransferase Swoo_2389 2929252 - 2930592 + | FAD dependent oxidoreductase Swoo_2390 2931710 - 2930589 - | spermidine/putrescine-binding periplasmic protein-like protein Swoo_2391 2931881 - 2932156 + | hypothetical protein Swoo_2392 2932325 - 2932714 + | hypothetical protein TERM 2933 2932754 - 2932772 + T 91 -10.3 -4.77157 | opp_overlap 2932754 AATAGGTACAAAAAA GCCAACC ATTAA GGTTGGC TTTTTAATGACTTAA TERM 2934 2932772 - 2932754 - T 100 -10.3 -5.30686 | opp_overlap 2932754 AATAGGTACAAAAAA GCCAACC ATTAA GGTTGGC TTTTTAATGACTTAA Swoo_2393 2933800 - 2932790 - | glyceraldehyde-3-phosphate dehydrogenase, type I Swoo_2394 2934867 - 2934031 - | hypothetical protein TERM 2935 2934153 - 2934164 + g 75 -4.4 -5.01732 | AATCACCATTGATTA GCAT CAAC ATGC TTTTTTCAGAAACTT TERM 2936 2934926 - 2934943 + H 78 -6.9 -4.42238 | TACATTAAATATCTT GCTGGCT TGAG AGCCTGC TTTTCATTACAATAG Swoo_2395 2935070 - 2936506 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 2937 2936570 - 2936593 + F 89 -6.6 -5.36441 | opp_overlap 2936567 2936570 AGTAGAATGAAATAA GCCCCACGCT TAAC GGTATGGGGC TTTTTTATATCGACA TERM 2938 2937136 - 2937116 - f 77 -10.5 -2.89742 | overlap 2937119 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CTGAATAAGCGTGCC TERM 2939 2937133 - 2937119 - f 74 -8.6 -3.5947 | overlap 2937116 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCTGAATAAGCGT TERM 2940 2937196 - 2937215 + F 80 -7.8 -4.42974 | opp_overlap 2937196 TAAGATGACATTGAA GCCTCGAC ATTA GTTGGGGC TTTCTTGTATCTAAA TERM 2941 2937309 - 2937328 + F 80 -7.8 -4.42974 | opp_overlap 2937309 TAAGATGACATTGAA GCCTCGAC ATTA GTTGGGGC TTTCTTGTATCTAAA TERM 2942 2937423 - 2937442 + F 80 -7.8 -4.42974 | opp_overlap 2937423 TAAGATGACATTGAA GCCTCGAC ATTA GTTGGGGC TTTCTTGTATCTAAG TERM 2943 2937537 - 2937556 + F 80 -7.8 -4.42974 | opp_overlap 2937537 TAAGATGACATTGAA GCCTCGAC ATTA GTTGGGGC TTTCTTGTATCTAAA TERM 2944 2938382 - 2938364 - f 72 -6 -4.41548 | opp_overlap 2938364 2938355 2938368 TCAGAGGCTACAAAA TTGGCATA TTG TGTGCCAA TATGTGCTTGCTACG Swoo_2397 2938440 - 2939024 + | TetR family transcriptional regulator Swoo_2398 2940320 - 2939094 - | glutathione S-transferase-like protein TERM 2945 2940257 - 2940268 + g 77 -4.4 -5.14965 | opp_overlap 2940257, overlap 2940244 2940243 CCTCTTGCTCAGAGA GCAA AACT TTGC TTTTTTCGTGCAAAT Swoo_2399 2941181 - 2940348 - | ThiJ/PfpI domain-containing protein Swoo_2400 2943003 - 2941234 - | sulfatase TERM 2946 2943073 - 2943063 - H 77 -6.8 -4.60797 | GGCGCACATACAAAA CAGC TGT GCTG CCGTAAGTCATCCAT Swoo_2401 2943265 - 2944551 + | membrane protein involved in aromatic hydrocarbon degradation Swoo_2402 2944651 - 2945487 + | short-chain dehydrogenase/reductase SDR Swoo_2403 2945579 - 2946007 + | hypothetical protein Swoo_2404 2946113 - 2946637 + | hypothetical protein TERM 2947 2948149 - 2948135 - g 70 -7.2 -3.8766 | CGATATTAGATCAAA CAGATA GCA TATCTG AGCAAGCGTCATTAC TERM 2948 2948591 - 2948579 - g 74 -3.3 -5.10461 | overlap 2948590 CTGATCGAATAAAAA CGCCC AAA AAGCG CATTGGTGATCAATG Swoo_2405 2946667 - 2950566 + | molydopterin dinucleotide-binding region Swoo_2406 2950693 - 2951736 + | hypothetical protein Swoo_2407 2951765 - 2952043 + | hypothetical protein TERM 2949 2952092 - 2952072 - T 70 -8.3 -3.29739 | opp_overlap 2952072 CTTAAGTTATATGAA TCCCAATCA TTA TGGTTGGGA TTTTTTGTATGGGCT TERM 2950 2952072 - 2952092 + T 100 -10.5 -5.37043 | opp_overlap 2952072 CTTAAGTTATATGAA TCCCAATCA TTA TGGTTGGGA TTTTTTGTATGGGCT Swoo_2408 2954332 - 2952686 - | sulfatase TERM 2951 2953186 - 2953202 + g 87 -8.7 -4.56597 | opp_overlap 2953185 AAGGAACTCGAATAC CGCCTTC AAA GAAGGTG TTTTTCCAACCGCGG TERM 2952 2953282 - 2953306 + g 71 -4.4 -4.62471 | gap 1, opp_overlap 2953282 2953286, overlap 2953286 CACTACTTAAGATCA CAATGGTATTG TCTG CAATGCC-TTG TTTTTCAAGCTTGGC TERM 2953 2953286 - 2953303 + g 73 -6.3 -4.42235 | opp_overlap 2953282 2953286, overlap 2953282 ACTTAAGATCACAAT GGTATTG TCTG CAATGCC TTGTTTTTCAAGCTT TERM 2954 2954429 - 2954393 - H 76 -10.3 -2.75957 | overlap 2954398 2954400 2954402 2954411 2954428 GAGCAACTTGAATTA CCATACATATTGACACA ACA TATGACAATATGTAAGG CTAAATATTAACCAA Swoo_2409 2954500 - 2956164 + | AMP-dependent synthetase and ligase TERM 2955 2956169 - 2956181 + F 75 -7.7 -4.18506 | opp_overlap 2956169 2956166 AATCGACATAAACCA CGCTT TTT AAGCG TTATTTTACGAATAA Swoo_2410 2956215 - 2956643 + | hypothetical protein TERM 2956 2956942 - 2956961 + F 100 -11.4 -5.4251 | TAAGATGACGTTGAA GCCTCGAC ATTA GTCGGGGC TTTTTTGTATCTAAA TERM 2957 2957661 - 2957637 - g 70 -5.7 -4.38313 | overlap 2957625 2957640 2957653 2957658 ATACCAAATCTAAAA CTATTTGGGTT AGT AACCCAACTTG GGCCAACCACAAGAA Swoo_2411 2957270 - 2958463 + | aspartate transaminase TERM 2958 2958512 - 2958476 - T 95 -12.5 -3.27017 | opp_overlap 2958479 2958480 2958486, overlap 2958479 2958486 TAATTGTAAAGAAAG TATTTAAAAAGGACAGC TTA GCTGTCCTTTTTAGTTA ATTGGTTATCGTGTC TERM 2959 2958479 - 2958509 + T 100 -16.4 -3.48466 | opp_overlap 2958479 2958476 2958486, overlap 2958480 2958486 TTGTAAAGAAAGTAT TTAAAAAGGACAGC TTA GCTGTCCTTTTTAG TTAATTGGTTATCGT TERM 2960 2958509 - 2958479 - T 95 -14.2 -2.50589 | opp_overlap 2958479 2958480 2958486, overlap 2958476 2958486 TTGTAAAGAAAGTAT TTAAAAAGGACAGC TTA GCTGTCCTTTTTAG TTAATTGGTTATCGT TERM 2961 2958480 - 2958508 + T 100 -17.7 -2.68356 | opp_overlap 2958479 2958476 2958486, overlap 2958479 2958486 TGTAAAGAAAGTATT TAAAAAGGACAGC TTA GCTGTCCTTTTTA GTTAATTGGTTATCG TERM 2962 2958502 - 2958486 - T 100 -12.3 -4.72386 | opp_overlap 2958480 2958479 2958486, overlap 2958479 2958476 GAAAGTATTTAAAAA GGACAGC TTA GCTGTCC TTTTTAGTTAATTGG TERM 2963 2958486 - 2958502 + T 100 -12.3 -4.93547 | opp_overlap 2958486 2958479 2958476, overlap 2958480 2958479 GAAAGTATTTAAAAA GGACAGC TTA GCTGTCC TTTTTAGTTAATTGG Swoo_2412 2959412 - 2958510 - | protein of unknown function UPF0052 and CofD Swoo_2413 2959570 - 2960397 + | Bax protein, putative Swoo_2414 2960375 - 2960998 + | hypothetical protein TERM 2964 2961003 - 2961033 + T 72 -9.3 -2.84723 | gap 1, opp_overlap 2961003 2961006 2961012, overlap 2961012 GAACTTTATAGCAAT TAATAAAAACCAGC GAAA GCTGGTTTTT-TTA TGATTAATCTTGCCA TERM 2965 2961033 - 2961003 - T 71 -9.3 -2.56475 | gap 1, opp_overlap 2961003 2961012, overlap 2961006 2961012 GAACTTTATAGCAAT TAATAAAAACCAGC GAAA GCTGGTTTTT-TTA TGATTAATCTTGCCA TERM 2966 2961031 - 2961006 - T 74 -9.1 -3.43071 | opp_overlap 2961003 2961012, overlap 2961003 2961012 CTTTATAGCAATTAA TAAAAACCAGC GAAA GCTGGTTTTTT TATGATTAATCTTGC TERM 2967 2961012 - 2961025 + T 100 -8.1 -5.71983 | opp_overlap 2961006 2961003 2961012, overlap 2961003 AGCAATTAATAAAAA CCAGC GAAA GCTGG TTTTTTTATGATTAA TERM 2968 2961025 - 2961012 - T 100 -8.1 -5.20534 | opp_overlap 2961012 2961003, overlap 2961006 2961003 AGCAATTAATAAAAA CCAGC GAAA GCTGG TTTTTTTATGATTAA Swoo_2415 2962013 - 2961054 - | PP-loop domain-containing protein TERM 2969 2961251 - 2961276 + g 70 -6.3 -4.2803 | gap 1 AATCAAACTGCTCTC TATCTACACCTT GAG AAGGTG-AGGTA TTTTGCATTGCGGTA TERM 2970 2961948 - 2961969 + g 73 -4.4 -4.87291 | GGCTTTACCGACTTC GCTTCTGA TTTTTT TCTGAAGC TTTTTCATTCGGGTA TERM 2971 2962051 - 2962021 - R 89 -4 -5.77988 | gap 1, opp_overlap 2962021 2962041 ACAGACATAAAAAAA CGCGCCTAGTAAC ACTTGA ATTAC-GGGCGCG TAGTATATATTAAAA Swoo_2416 2963017 - 2962085 - | UspA domain-containing protein TERM 2972 2963233 - 2963255 + r 78 -10.6 -3.1855 | opp_overlap 2963233 AAGAGCAATAAAAAA GCGTCAATAC AAA GTACTGACGC TTAGATATTCAAACA TERM 2973 2963255 - 2963233 - R 100 -12.8 -5.54885 | opp_overlap 2963233 AAGAGCAATAAAAAA GCGTCAATAC AAA GTACTGACGC TTAGATATTCAAACA Swoo_2417 2964047 - 2963298 - | Crp/FNR family transcriptional regulator Swoo_2418 2964795 - 2964103 - | hypothetical protein Swoo_2419 2964986 - 2964792 - | cytochrome oxidase maturation protein, cbb3-type Swoo_2420 2967361 - 2964983 - | heavy metal translocating P-type ATPase TERM 2974 2967418 - 2967401 - R 70 -8.4 -3.28889 | overlap 2967399 ATACAGCAAGCAAGA GAGCGG GCAGGG CCGCTC TAGAGGTGATACCAG Swoo_2421 2967913 - 2967434 - | hypothetical protein TERM 2975 2967983 - 2968003 + r 100 -15.5 -3.42147 | opp_overlap 2967983 GCACCCTAAAAAAAA GGCCTCGAT ACG ATCGAGGCC TTCCTGTTACTTAGA TERM 2976 2968003 - 2967983 - R 100 -15.5 -5.78622 | opp_overlap 2967983 GCACCCTAAAAAAAA GGCCTCGAT ACG ATCGAGGCC TTCCTGTTACTTAGA Swoo_2422 2969001 - 2968024 - | cytochrome c oxidase, cbb3-type, subunit III TERM 2977 2968893 - 2968903 + g 77 -6.8 -4.56775 | ATTCGCCTTCTTCAA CACC AGT GGTG TTTTTAGAGACGAGT Swoo_2423 2969168 - 2969001 - | Cbb3-type cytochrome oxidase component Swoo_2424 2969810 - 2969184 - | cytochrome c oxidase, cbb3-type, subunit II Swoo_2425 2971247 - 2969823 - | cytochrome c oxidase, cbb3-type, subunit I TERM 2978 2971363 - 2971373 + H 72 -5.4 -4.58303 | overlap 2971350 GGGCATGTCAATGTG TTGC CCT GCAA TTTTGTGATATTTGC Swoo_2426 2971510 - 2971974 + | hypothetical protein Swoo_2427 2973622 - 2972057 - | response regulator receiver modulated metal dependent phosphohydrolase Swoo_2428 2973814 - 2974101 + | hypothetical protein Swoo_2429 2974291 - 2975583 + | integrase family protein TERM 2979 2977020 - 2977010 - g 70 -5.4 -4.40561 | TGTTTTGAAAAAGAA GATC GGT GATC ATGAAACATGTAAGT Swoo_2430 2976309 - 2977265 + | hypothetical protein Swoo_2431 2977318 - 2978373 + | hypothetical protein TERM 2980 2978444 - 2978465 + T 100 -15.9 -5.65177 | opp_overlap 2978437 2978444 TAAGAAAAGTCCAAA CCGTACCCG TTAA CGGGTACGG TTTTTTTATGCCTGT TERM 2981 2978465 - 2978444 - T 100 -15.9 -3.80207 | opp_overlap 2978444, overlap 2978437 TAAGAAAAGTCCAAA CCGTACCCG TTAA CGGGTACGG TTTTTTTATGCCTGT TERM 2982 2978864 - 2978836 - T 83 -11.1 -3.55444 | GGGCGAGTCCTCAAA GCTCAGCTATCGA GCC TCGATAGGTAAGC CAATAAACAGAAGCA Swoo_2432 2981132 - 2980308 - | hypothetical protein Swoo_2433 2982009 - 2981119 - | appr-1-p processing domain-containing protein TERM 2983 2982087 - 2982064 - R 73 -6.6 -4.35885 | ACGCACCATAACAAA GCAGCGACGC GTTA ACATCGCAGC TCACAGTCAGTTGAA Swoo_2434 2982962 - 2982132 - | hypothetical protein TERM 2984 2982247 - 2982235 - G 72 -3.3 -4.97666 | AACAGATCATAAAAA GCCAC ATG GTCGC CAGAAAACTCACCTT TERM 2985 2982295 - 2982283 - G 79 -4.1 -5.26119 | GCCGTAAAAACAAAA TTGCC CTC AGCAA TAATCATATGAGTAT Swoo_2435 2983195 - 2984073 + | LysR family transcriptional regulator Swoo_2436 2985292 - 2984159 - | kelch repeat-containing protein Swoo_2437 2986302 - 2985481 - | response regulator receiver protein TERM 2986 2986184 - 2986162 - G 71 -4.8 -4.46155 | opp_overlap 2986165, overlap 2986165 TAGAGACTCAGAAAA GAAGAAGGGA TAA CCCCCTCTTT TGGAGTGCAGGTAGT TERM 2987 2986181 - 2986165 - G 73 -6.5 -4.33785 | opp_overlap 2986165, overlap 2986162 AGACTCAGAAAAGAA GAAGGGA TAA CCCCCTC TTTTGGAGTGCAGGT TERM 2988 2986288 - 2986257 - G 90 -11.1 -4.33739 | opp_overlap 2986257 2986256 2986251 GAAAAAAGCCTAAAA GCTTATTTCCAAG GGATGG CTTGAAAATAAGC GTTAGTTTATTCATC Swoo_2438 2987821 - 2986343 - | hypothetical protein TERM 2989 2987968 - 2987937 - H 70 -3 -5.16237 | overlap 2987939 AATCTCAGGAAAAAA GATGGAGTTAATTG ATGG CAATTAACACTAGC GCAGAGCTTTCGGAT TERM 2990 2988098 - 2988075 - g 74 -10.4 -3.17797 | CGCAGACAGAGGCAA CGTCTAAATG CTCC CACTTAGACG CAGTCGACTTGGCAA Swoo_2439 2987951 - 2988298 + | TraR/DksA family transcriptional regulator Swoo_2440 2989221 - 2988343 - | hypothetical protein Swoo_2441 2989727 - 2989281 - | methionine-R-sulfoxide reductase Swoo_2442 2990071 - 2989787 - | hypothetical protein Swoo_2443 2991509 - 2990100 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Swoo_2444 2992566 - 2991577 - | hypothetical protein Swoo_2445 2993840 - 2992557 - | hypothetical protein TERM 2991 2993227 - 2993211 - G 74 -7.9 -4.0251 | ATTATCATAAGCAAA GCCACTG CCA CTGTGGC CTAACTGATATACTC TERM 2992 2993684 - 2993667 - G 74 -4.1 -5.0133 | GAGTTCTTCAAAAAA CCAAGTC GTAT GACCTAG ATGCCATTTAGGTGG Swoo_2447 2994921 - 2995175 + | hypothetical protein TERM 2993 2995210 - 2995243 + T 79 -11.2 -2.97017 | opp_overlap 2995211 AGCAATCTGTTATTA ATGTGATTAGCCTT AATTTA AAGGCTAATCACAC TCTGCTTATAAACTT TERM 2994 2995242 - 2995211 - T 100 -14.7 -3.15579 | opp_overlap 2995210 GCAATCTGTTATTAA TGTGATTAGCCTT AATTTA AAGGCTAATCACA CTCTGCTTATAAACT Swoo_2448 2995884 - 2995354 - | redoxin domain-containing protein TERM 2995 2995699 - 2995710 + g 71 -4.4 -4.68506 | opp_overlap 2995699, overlap 2995691 ACCAAGTTTAAGAAA CTCA AGTT TGAG TTTTTCAACTTCATT Swoo_2449 2997130 - 2995967 - | hypothetical protein TERM 2996 2996873 - 2996828 - G 77 -5 -4.90917 | gap 1, overlap 2996829 AAATTCAATTAAAAA CTCAGCTTTCCCTAAATAATC TGGCC AATTATTCAGGGTAA-CTGAA TCGGTATCTCTTAGC Swoo_2450 2998145 - 2997177 - | glutathione S-transferase domain-containing protein Swoo_2451 2999143 - 2998157 - | glutathione S-transferase-like protein TERM 2997 2999538 - 2999552 + G 72 -8.6 -3.69094 | opp_overlap 2999537 2999534 TAATTGTCAAATATC CTCTGT TCA ACAGAG TTTAAATGGTGCCTT Swoo_2452 2999287 - 3000189 + | LysR family transcriptional regulator TERM 2998 3000197 - 3000207 + F 80 -2.6 -5.52384 | opp_overlap 3000199 AGAAGTAGCCTTAAT TATT ATC AATA TTTTTTTGATAAAGA Swoo_2453 3000322 - 3000612 + | antibiotic biosynthesis monooxygenase Swoo_2454 3000701 - 3001357 + | nitroreductase TERM 2999 3001413 - 3001395 - T 100 -8.9 -5.38047 | opp_overlap 3001395 CAGCCACATAAAAAA TAGCTCC TTAAT GGAGCTA TTTTTTTGTTAACAG TERM 3000 3001395 - 3001413 + T 100 -8.9 -5.7946 | opp_overlap 3001395 CAGCCACATAAAAAA TAGCTCC TTAAT GGAGCTA TTTTTTTGTTAACAG Swoo_2455 3002083 - 3001445 - | hypothetical protein Swoo_2456 3002701 - 3002102 - | hypothetical protein Swoo_2457 3003631 - 3002747 - | peptidoglycan binding domain-containing protein TERM 3001 3003911 - 3003891 - R 100 -14.1 -5.30348 | opp_overlap 3003891 AGTGAATAACAAAAA GCCAGAGTT TTG AACTCTGGC TTTGAAGTGACTTTA TERM 3002 3003891 - 3003911 + r 100 -14.1 -3.62864 | opp_overlap 3003891 AGTGAATAACAAAAA GCCAGAGTT TTG AACTCTGGC TTTGAAGTGACTTTA Swoo_2458 3004599 - 3003949 - | hypothetical protein TERM 3003 3004778 - 3004757 - R 91 -10.1 -4.80959 | opp_overlap 3004757 3004753 GAATTCATAATAAAA GGGAGCCTT AGAG ATGGCTCCC TTACTTTCTCTTCGA TERM 3004 3004757 - 3004778 + r 80 -10.1 -3.69341 | opp_overlap 3004757, overlap 3004753 GAATTCATAATAAAA GGGAGCCTT AGAG ATGGCTCCC TTACTTTCTCTTCGA Swoo_2459 3005442 - 3004795 - | lysine exporter protein LysE/YggA Swoo_2460 3005965 - 3007200 + | hypothetical protein TERM 3005 3007253 - 3007228 - f 70 -9 -3.06183 | opp_overlap 3007228 CTTACCTTTATCTAA GGGCTCACCC TCAATT GAATGAGCCC TTTCGCTATTAACAA Swoo_2461 3007429 - 3007881 + | hypothetical protein Swoo_2462 3007878 - 3008348 + | RES domain-containing protein TERM 3006 3008952 - 3008934 - g 71 -9.6 -3.06133 | opp_overlap 3008934 TAATGGCTTAGGGAA GCGCACTA TGG TAATGCGC TATCTCAATCGTCAT TERM 3007 3009899 - 3009883 - g 74 -7.9 -4.09685 | TGGGATGGCCTAAAA CGTGCGC TGC GCTCACG CAAGCTAAGCCTTAG Swoo_2463 3008716 - 3011166 + | peptidase S16 lon domain-containing protein TERM 3008 3011195 - 3011226 + T 91 -13.2 -2.62192 | opp_overlap 3011200, overlap 3011200 AAAAGTATAAGATCA AAAAAGCCGAAACA GTGA TGTTTCGGCTTTTC ATTCATTAACTAAGC TERM 3009 3011200 - 3011221 + T 100 -13.1 -4.4959 | opp_overlap 3011200, overlap 3011195 TATAAGATCAAAAAA GCCGAAACA GTGA TGTTTCGGC TTTTCATTCATTAAC TERM 3010 3011221 - 3011200 - T 100 -13.1 -5.30189 | opp_overlap 3011200 3011195 TATAAGATCAAAAAA GCCGAAACA GTGA TGTTTCGGC TTTTCATTCATTAAC Swoo_2464 3012173 - 3011253 - | inorganic diphosphatase TERM 3011 3011439 - 3011429 - G 74 -5.4 -4.71426 | opp_overlap 3011436 CGGTCAGCAATAAAA TCAC GCT GTGA CGCTCACCTTCTGCT Swoo_2465 3012365 - 3012793 + | peptidase S24/S26 domain-containing protein TERM 3012 3013672 - 3013684 + G 79 -9.1 -3.99062 | opp_overlap 3013672 CCACCAGCAATGCAA GAGCC CAA GGCTC TTTGTGCTCAGTATT TERM 3013 3013684 - 3013672 - g 70 -9.1 -3.21695 | opp_overlap 3013672 CCACCAGCAATGCAA GAGCC CAA GGCTC TTTGTGCTCAGTATT Swoo_2466 3012837 - 3014090 + | DNA-repair protein Swoo_2467 3014517 - 3014143 - | hypothetical protein TERM 3014 3015646 - 3015635 - g 70 -5.8 -4.42062 | TATCTGGTAAATAAA GGCA AAGA TGCC GATGTGACTTTAGTT Swoo_2468 3014936 - 3016129 + | RND family efflux transporter MFP subunit Swoo_2469 3016133 - 3019354 + | acriflavin resistance protein TERM 3015 3019412 - 3019377 - T 91 -12.8 -3.12395 | gap 1, opp_overlap 3019382, overlap 3019382 GCTATTAGCCAAAAG TAAAATGCCGC-TCTGT TTA ACAGAAGCGGCATTTTT TATAGGGATGGAACT TERM 3016 3019407 - 3019382 - T 100 -12.7 -4.68645 | gap 1, opp_overlap 3019382, overlap 3019377 TAGCCAAAAGTAAAA TGCCGC-TCTGT TTA ACAGAAGCGGCA TTTTTTATAGGGATG TERM 3017 3019382 - 3019407 + T 100 -12.7 -5.252 | gap 1, opp_overlap 3019377 3019382 TAGCCAAAAGTAAAA TGCCGC-TCTGT TTA ACAGAAGCGGCA TTTTTTATAGGGATG Swoo_2470 3020345 - 3019497 - | protein of unknown function DUF306 Meta and HslJ TERM 3018 3020098 - 3020108 + g 74 -8.2 -4.10161 | opp_overlap 3020091 GCAATAAGCTCTGAA GCCG CAT CGGC TTTTGAAACATCCTC TERM 3019 3020722 - 3020687 - R 100 -15.6 -2.72144 | opp_overlap 3020693, overlap 3020693 CTACTGCCTCGAAAC GAAAAAGCCCCAAGTA TCTC TACTTGGGGCTTCATC TAAATATGGCGGAGG TERM 3020 3020693 - 3020716 + r 100 -15.4 -3.28912 | opp_overlap 3020693 3020687 CCTCGAAACGAAAAA GCCCCAAGTA TCTC TACTTGGGGC TTCATCTAAATATGG TERM 3021 3020716 - 3020693 - R 100 -15.4 -4.98531 | opp_overlap 3020693, overlap 3020687 CCTCGAAACGAAAAA GCCCCAAGTA TCTC TACTTGGGGC TTCATCTAAATATGG TERM 3022 3020943 - 3020960 + r 70 -7.1 -3.73982 | opp_overlap 3020959 GAAGATAAATCCAGC GCTTAAT CACG ATTAAGC TTATCTTGCTCTAGA Swoo_2471 3022204 - 3020945 - | Bcr/CflA subfamily drug resistance transporter Swoo_2472 3022332 - 3023234 + | LysR family transcriptional regulator Swoo_2473 3023599 - 3024258 + | hypothetical protein TERM 3023 3024342 - 3024360 + F 100 -9.6 -5.70829 | opp_overlap 3024342 TATTTTACGTTAGAA TAGCTCCT TAA AGGGGCTA TTTTTTTGTCCTGTT Swoo_2474 3024403 - 3024792 + | sulfur relay protein TusD/DsrE Swoo_2475 3024861 - 3025217 + | sulfur relay protein TusC/DsrF Swoo_2476 3025217 - 3025498 + | sulfur relay protein TusB/DsrH TERM 3024 3025831 - 3025808 - g 74 -3.8 -4.94222 | AACAAGCGACAAAAA TAGCTGGCCT TCCT AAACCTGCTA AGTGTATATAAAAAA Swoo_2477 3025495 - 3025842 + | TusE/DsrC/DsvC family sulfur relay protein TERM 3025 3025871 - 3025848 - T 100 -11.1 -5.71712 | opp_overlap 3025848 GTGTATATAAAAAAA CCTCAACCA GATTAA TGGTTGAGG TTTTTAAAGCAGTTC TERM 3026 3025848 - 3025871 + T 90 -11.1 -4.58283 | opp_overlap 3025848 GTGTATATAAAAAAA CCTCAACCA GATTAA TGGTTGAGG TTTTTAAAGCAGTTC Swoo_2478 3026099 - 3025974 - | hypothetical protein TERM 3027 3026195 - 3026211 + r 77 -9.5 -3.54475 | TACTAACTACTTACG GATTGGT TTA ACCAATC TTCTCTAATCCACCC Swoo_2479 3027488 - 3026202 - | seryl-tRNA synthetase Swoo_2480 3027881 - 3027507 - | CrcB protein Swoo_2481 3029205 - 3027874 - | ATPase central domain-containing protein Swoo_2482 3029841 - 3029215 - | outer membrane lipoprotein carrier protein LolA TERM 3028 3029906 - 3029924 + r 73 -7.4 -4.13282 | opp_overlap 3029906 3029905, overlap 3029909 TAGTCCCACAAATAT CAAAAGCC AGC GGCTGTTG TTTTGAGGCTATCAT Swoo_2483 3032491 - 3029939 - | cell divisionFtsK/SpoIIIE TERM 3029 3032658 - 3032641 - R 93 -11.3 -4.89477 | opp_overlap 3032641 GGCGGAATAAGAAAA GGAGCCA TAGT TGGCTCC TTTGTCATTACTACC TERM 3030 3032641 - 3032658 + r 86 -11.3 -4.08144 | opp_overlap 3032641 GGCGGAATAAGAAAA GGAGCCA TAGT TGGCTCC TTTGTCATTACTACC Swoo_2484 3033185 - 3032682 - | AsnC family transcriptional regulator TERM 3031 3033263 - 3033240 - H 78 -9.6 -3.57792 | CTACGTATGTCGAAA GTTCAGCAGC ATAA ACTGCCGAAC TGATACTATACTAGA TERM 3032 3033326 - 3033340 + H 76 -5.7 -4.89393 | AAAATCACAATTATT CCCAT ATATA ATGGG TTTTTATGCAATTTG TERM 3033 3033414 - 3033398 - g 71 -2.1 -5.13137 | overlap 3033399 TAAAGAAATCAAAAA CCACGAG TAT CGCGTTG GAATGGTCCCATCAA TERM 3034 3033883 - 3033924 + G 74 -11 -2.52023 | overlap 3033881 CAGCTAAAGTCGTCA TCATCGGCGGCGGCA-TGGT GGGA ACCAATGCCGC-GCAGATGG CTGTTGGTCTAGGTG Swoo_2485 3033366 - 3034481 + | alanine dehydrogenase TERM 3035 3034501 - 3034468 - f 100 -13.5 -4.70659 | TCGTAGACCCAAAAA TTTTACTTAGCTAAA CTAT TTTAGCCAAGTAAAA ATTCAGGGAGCCATC TERM 3036 3034527 - 3034503 - f 71 -4.1 -4.88407 | opp_overlap 3034507, overlap 3034504 3034507 TTAGCCAAGTAAAAA TTCAGGGAGCC ATC GGCTCCCTTTT TTCGATTAGAACAAT TERM 3037 3034507 - 3034523 + F 100 -13.7 -5.15969 | opp_overlap 3034504 3034503 3034507 CCAAGTAAAAATTCA GGGAGCC ATC GGCTCCC TTTTTTCGATTAGAA TERM 3038 3034523 - 3034507 - f 93 -13.7 -2.88788 | opp_overlap 3034507, overlap 3034504 3034503 CCAAGTAAAAATTCA GGGAGCC ATC GGCTCCC TTTTTTCGATTAGAA Swoo_2486 3034628 - 3035584 + | thioredoxin reductase TERM 3039 3035613 - 3035630 + T 100 -9.1 -5.51402 | GAATTAATTTTACTA GCAGGCT TTTA GGCCTGC TTTTTTTACCTCTAT Swoo_2487 3036216 - 3035656 - | NnrU family protein TERM 3040 3036350 - 3036335 - R 100 -10.4 -5.41359 | opp_overlap 3036335 AAGGAAACTAAAAAA GGGACC CGAA GGTCCC TTTCTAAAGCAGATT TERM 3041 3036335 - 3036350 + r 83 -10.4 -3.86194 | opp_overlap 3036335 AAGGAAACTAAAAAA GGGACC CGAA GGTCCC TTTCTAAAGCAGATT Swoo_2488 3036732 - 3036373 - | ribosomal protein L20 Swoo_2489 3036945 - 3036751 - | ribosomal protein L35 Swoo_2490 3037573 - 3037031 - | translation initiation factor IF-3 TERM 3042 3037264 - 3037276 + g 72 -3.3 -4.99947 | overlap 3037262 AATCGTTTTCATCTG TACCG GGA CGGAA TTTTATTTCCTTCAC Swoo_2491 3039505 - 3037577 - | threonyl-tRNA synthetase TERM 3043 3038953 - 3038933 - G 70 -6.9 -4.0896 | AAAGTGTTGGCAAAA CTTCATGTT TGG AACATGAGG ACCCCGGCACATATC Swoo_2492 3039714 - 3040103 + | hypothetical protein Swoo_2493 3040249 - 3040449 + | hypothetical protein TERM 3044 3040491 - 3040478 - T 100 -8.1 -5.65177 | ACAGGCACAAAAAAA CCAGC TTTA GCTGG CCTACTTAACTTTAA TERM 3045 3042505 - 3042539 + T 100 -17.4 -3.60098 | opp_overlap 3042506 3042514, overlap 3042506 3042514 TTTATAGTGCATATT ACGTAAAAAGAAGCCA ATT TGGCTTCTTTTTACGA TTTAAAATACACAAT TERM 3046 3042506 - 3042538 + T 100 -20.9 -2.75844 | opp_overlap 3042506 3042514, overlap 3042505 3042514 TTATAGTGCATATTA CGTAAAAAGAAGCCA ATT TGGCTTCTTTTTACG ATTTAAAATACACAA TERM 3047 3042538 - 3042506 - T 100 -20.9 -2.64243 | opp_overlap 3042505 3042506 3042514, overlap 3042514 TTATAGTGCATATTA CGTAAAAAGAAGCCA ATT TGGCTTCTTTTTACG ATTTAAAATACACAA TERM 3048 3042530 - 3042514 - T 91 -10.9 -4.69664 | opp_overlap 3042514 3042506 3042505, overlap 3042506 CATATTACGTAAAAA GAAGCCA ATT TGGCTTC TTTTTACGATTTAAA TERM 3049 3042514 - 3042530 + T 91 -10.9 -4.70879 | opp_overlap 3042506 3042514, overlap 3042506 3042505 CATATTACGTAAAAA GAAGCCA ATT TGGCTTC TTTTTACGATTTAAA Swoo_2494 3043935 - 3042559 - | MATE efflux family protein TERM 3050 3044301 - 3044319 + G 73 -6 -4.3467 | opp_overlap 3044301 3044300 CAAGAGTTCTAGAAG TGAGCC ATACCGA GGCTCA TTTTGATATAAAACT TERM 3051 3044497 - 3044465 - g 83 -10.7 -3.65426 | overlap 3044473 CCAGAAACCTTGAAA CTCACAAACCTTGAT ATC ATCAAAGCTGGTGAG ACATTAAATATCGAG Swoo_2495 3043967 - 3044581 + | riboflavin synthase, alpha subunit TERM 3052 3044606 - 3044632 + T 95 -13 -3.77241 | opp_overlap 3044606, overlap 3044593 AGGTAAAATTTAAAA GGCCGACTCCTG TAA TAGAAGTCGGCC TTTAACTTAAGCTTT TERM 3053 3044632 - 3044606 - T 100 -14.5 -4.43272 | opp_overlap 3044593 3044606 AGGTAAAATTTAAAA GGCCGACTCCT GTAAT AGAAGTCGGCC TTTAACTTAAGCTTT Swoo_2496 3045869 - 3044652 - | AcnD-accessory protein PrpF TERM 3054 3045911 - 3045892 - R 100 -13.6 -3.24032 | overlap 3045876 3045890 ACCCTTTAATGAAGA GTGGCGCA ATAG TGCGCCAC GATAAATACCTAATG Swoo_2497 3048570 - 3045961 - | 2-methylisocitrate dehydratase, Fe/S-dependent TERM 3055 3046583 - 3046567 - G 72 -8.7 -3.68351 | TGCGTAGGAGTTAAA GTCCACC TCA GGTAGAC CCATCTTATCTAAAT TERM 3056 3048724 - 3048689 - R 81 -10.6 -3.39488 | TAAATAGAAATTCAA TCCTTATGGGGTTAGA AATT TCTAACCCCATCAAAA AATATGATAACTATT Swoo_2498 3049868 - 3048744 - | 2-methylcitrate synthase/citrate synthase II Swoo_2499 3050852 - 3049974 - | methylisocitrate lyase Swoo_2500 3051563 - 3050901 - | GntR family transcriptional regulator TERM 3057 3051450 - 3051464 + g 78 -8.6 -4.08216 | opp_overlap 3051450 GTATTTTGTCGACAA CTCAGT CTC ACTGAG TTTTGAACCAGCTAA Swoo_2501 3051743 - 3052594 + | hypothetical protein TERM 3058 3052647 - 3052618 - T 70 -7.9 -3.67773 | opp_overlap 3052618 3052617 GAGCGAAAAAATATA GGTGCTAGCTAAC TTCC ACTATCTAGCACC GTTTCTCTCCCACAA Swoo_2502 3052929 - 3052636 - | hypothetical protein TERM 3059 3052904 - 3052892 - G 74 -5.5 -4.60886 | ATACAACCAAATAAA GTAGC AAT GCCAC ATGCAATCTTAAGAA Swoo_2503 3053639 - 3052938 - | hypothetical protein Swoo_2504 3055668 - 3053632 - | TPR repeat-containing protein TERM 3060 3053877 - 3053839 - G 74 -3.3 -5.09225 | gap 1 AGCCGACTTAAAAAA TGCCATCGCCTCTTTA TATAACCC TAAAT-GACGATGGCA AACTCCTTGACGATA Swoo_2505 3057368 - 3055671 - | 2-alkenal reductase Swoo_2506 3057957 - 3057403 - | hypothetical protein TERM 3061 3057677 - 3057657 - G 76 -8.3 -3.95435 | CCTTCCAAAATAGAA GCAATGCAG TAC CTGCATCAC ATAATGGATGGTCTA Swoo_2507 3058872 - 3058081 - | hypothetical protein Swoo_2508 3063980 - 3058881 - | YD repeat-containing protein TERM 3062 3059045 - 3059032 - G 83 -3.8 -5.40072 | opp_overlap 3059044 TTCTGCTCAAAAAAA CGTC TCACTC GACG AGCACCTTGCTCTGT TERM 3063 3063547 - 3063529 - G 100 -3.8 -5.65177 | opp_overlap 3063529, overlap 3063530 ACATCCATAAAAAAA CTGGTGTC ATC GACATCAA CTTCATTGTCTGAAC Swoo_2509 3064903 - 3063977 - | hypothetical protein Swoo_2510 3065919 - 3064900 - | hypothetical protein Swoo_2511 3066803 - 3065997 - | ankyrin Swoo_2512 3068188 - 3066803 - | PAAR repeat-containing protein Swoo_2513 3070246 - 3068198 - | type VI secretion system Vgr family protein TERM 3064 3070405 - 3070395 - R 73 -4 -5.14965 | overlap 3070401 ACTGTCATGAAAAAA TATG AAG CATA ACCGTGCCAATTAAG TERM 3065 3070454 - 3070434 - R 74 -9 -3.64822 | gap 1, opp_overlap 3070433 3070434 AGCCTTCTATGTAAA CGGGAGCAC CTAA GTGC-CCCG CTTATTCACCTTAAG Swoo_2514 3071036 - 3070518 - | Hcp1 family type VI secretion system effector TERM 3066 3070959 - 3070949 - G 76 -5.4 -4.82901 | GGCCTTCGACAAAAA TGTC ACC GACA GAATCAGCAGTAAAC Swoo_2515 3072461 - 3071256 - | hypothetical protein TERM 3067 3072476 - 3072490 + r 73 -2.8 -5.30616 | TTTAAGTATCACCAA CAACGT ATA GTGTTG TTTTTATTTACGTAA TERM 3068 3072525 - 3072509 - R 100 -12.3 -4.67353 | opp_overlap 3072511 TTATTTACGTAAAAA CAGGGGA AGA TCCCCTG TCATCAATTAATACA Swoo_2516 3076096 - 3072533 - | type VI secretion protein IcmF Swoo_2517 3077517 - 3076114 - | type VI secretion-associated protein TERM 3069 3076733 - 3076721 - G 71 -7.7 -3.74747 | GCAATCGGCATCAAA CTGGT TTC ACCAG CAGCATTGGCATTTT Swoo_2518 3078163 - 3077522 - | hypothetical protein Swoo_2519 3079716 - 3078163 - | putative sigma54 specific transcriptional regulator Swoo_2520 3082307 - 3079716 - | type VI secretion ATPase Swoo_2521 3083102 - 3082317 - | hypothetical protein Swoo_2522 3084439 - 3083105 - | type VI secretion protein TERM 3070 3084286 - 3084272 - G 71 -7.8 -3.84648 | opp_overlap 3084272 3084272, overlap 3084267 3084264 CGCAATACGACCAAA CCCGAG GTA CTCAGG GTTTAGCTCGAGCTG Swoo_2523 3084972 - 3084442 - | hypothetical protein Swoo_2524 3086246 - 3084972 - | FHA domain-containing protein TERM 3071 3085366 - 3085383 + g 72 -7.1 -4.0342 | AATCTCAGTGGGTTA TCTTCAA TAGG TTGAAGA TTCTTATTCATTAAC TERM 3072 3085399 - 3085413 + g 70 -7.2 -3.89956 | opp_overlap 3085398 3085399 TTCTTATTCATTAAC TCATAG CGG CTATGA TTTGCTGTGTGGTGC Swoo_2525 3087322 - 3086315 - | type VI secretion protein Swoo_2526 3089052 - 3087286 - | type VI secretion protein TERM 3073 3088716 - 3088738 + gr 79 -9.9 -3.46511 | overlap 3088676 3088709 CTTCACCATCGACAG GGGTTGCAT CTAAC ATGCAGCCC TTCTCAATTGTCTGC Swoo_2527 3089480 - 3089055 - | type VI secretion system lysozyme-related protein Swoo_2528 3090962 - 3089487 - | EvpB family type VI secretion protein Swoo_2529 3091540 - 3091052 - | type VI secretion protein TERM 3074 3091606 - 3091591 - H 72 -7.6 -3.76125 | opp_overlap 3091590 CTATTCCAATTTAAA TTAGGC TATA GCCTAA ATGTAATAAGTTATC Swoo_2530 3092378 - 3095068 + | GCN5-related N-acetyltransferase Swoo_2531 3096181 - 3095138 - | diguanylate cyclase TERM 3075 3096076 - 3096057 - G 71 -2.2 -5.03314 | opp_overlap 3096057 TTCACCCCCAAAAAA TACTCA TACCAAAC TGAGTA GTTATCTGGAGTAAC Swoo_2532 3097995 - 3096361 - | sulfatase TERM 3076 3098060 - 3098045 - R 74 -6.2 -4.5464 | GATATACAAGCAAAA CATCTA AGGT TAGATG AATGCGCACCATAAT Swoo_2533 3099096 - 3098677 - | MarR family transcriptional regulator TERM 3077 3099075 - 3099055 - G 100 -12.7 -4.3739 | opp_overlap 3099055 GAGTTTTTCATAAAA CTCAACCAT GGC ATGGTTGAG TTTATCTTCAGTTGA TERM 3078 3099055 - 3099075 + g 100 -12.7 -4.23794 | opp_overlap 3099055 GAGTTTTTCATAAAA CTCAACCAT GGC ATGGTTGAG TTTATCTTCAGTTGA Swoo_2534 3100101 - 3099109 - | cation diffusion facilitator family transporter TERM 3079 3099591 - 3099632 + g 82 -12.5 -2.92642 | gap 1, overlap 3099615 3099620 CATGCTCATGCTCAT GCTCATGCTCATGCTCATTA TGA TGGTGACCATGAGCATG-GC TATGTCCATGGTGAT TERM 3080 3100214 - 3100159 - H 76 -8.8 -3.72374 | gap 1, opp_overlap 3100159 3100161, overlap 3100157 3100161 TTTGATTAAGAAATA GATACTTTGATAATCAAACTAAAATCA TTC TAATAT-AGTTTGACTATCAAAGTATA TTTAATTTAAAAATA TERM 3081 3100159 - 3100214 + H 71 -6.5 -4.06502 | opp_overlap 3100159 3100157 3100161, overlap 3100161 TTTGATTAAGAAATA GATACTTTGATAATCAAACTAAAAT CATTCT AATATAGTTTGACTATCAAAGTATA TTTAATTTAAAAATA TERM 3082 3100212 - 3100161 - H 85 -11.4 -3.43925 | gap 1, opp_overlap 3100159 3100161, overlap 3100159 3100157 TGATTAAGAAATAGA TACTTTGATAATCAAACTAAAATCA TTC TAATAT-AGTTTGACTATCAAAGTA TATTTAATTTAAAAA TERM 3083 3100161 - 3100212 + H 74 -9.1 -3.62354 | opp_overlap 3100161 3100159 3100157, overlap 3100159 TGATTAAGAAATAGA TACTTTGATAATCAAACTAAAAT CATTCT AATATAGTTTGACTATCAAAGTA TATTTAATTTAAAAA Swoo_2535 3100302 - 3100874 + | proteinase inhibitor I11 ecotin TERM 3084 3100896 - 3100923 + T 84 -11.4 -3.29461 | opp_overlap 3100901, overlap 3100901 TTTTCATACCCAACA AAAAAGGCTACC AGAT GGTAGCCTTTTC TTATAAGACGAGTTC TERM 3085 3100901 - 3100918 + T 91 -11.3 -4.77165 | opp_overlap 3100901, overlap 3100896 ATACCCAACAAAAAA GGCTACC AGAT GGTAGCC TTTTCTTATAAGACG TERM 3086 3100918 - 3100901 - T 100 -11.3 -5.49234 | opp_overlap 3100896 3100901 ATACCCAACAAAAAA GGCTACC AGAT GGTAGCC TTTTCTTATAAGACG Swoo_2536 3101588 - 3100947 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 3087 3101628 - 3101646 + r 73 -8.1 -3.56568 | opp_overlap 3101623, overlap 3101623 TTTTCATCAATGGCA CTGGTGC AACGA GCGCCAG TTTCCGGACTACTTA Swoo_2537 3103432 - 3101606 - | 6-phosphogluconate dehydratase TERM 3088 3102641 - 3102654 + g 71 -4.5 -4.66318 | TGTCAAACGGCACAC CTGCT TAGC GGCAG TTTTATTGAGCTCCT Swoo_2538 3104143 - 3103442 - | 6-phosphogluconolactonase TERM 3089 3103737 - 3103716 - G 72 -7.3 -4.0342 | GGGAACCAAGAACAA GTATGGCCA TCAT TGCCCATAC CTAACACCACGACAT Swoo_2539 3105625 - 3104153 - | glucose-6-phosphate 1-dehydrogenase TERM 3090 3106705 - 3106715 + G 70 -6.8 -4.0896 | GGTTTCACTCTACGC CGTG GAC CACG TTTTAGAGAAAGTTT Swoo_2540 3105934 - 3106788 + | RpiR family transcriptional regulator Swoo_2541 3106973 - 3108412 + | pyruvate kinase TERM 3091 3108435 - 3108452 + T 100 -11.3 -5.28176 | opp_overlap 3108435 CTAGTGATGATAAAA GGTTCGC CGCG GCGAACC TTTTTTATGCCTAAC TERM 3092 3108452 - 3108435 - T 90 -11.3 -4.4767 | opp_overlap 3108435 CTAGTGATGATAAAA GGTTCGC CGCG GCGAACC TTTTTTATGCCTAAC TERM 3093 3108511 - 3108482 - T 95 -12.3 -4.0371 | opp_overlap 3108482 3108489, overlap 3108489 CAGTTTGCAGAGAAA CAAAAAAGGACGC TACG GCGTCCTTTTTTC ATTTAGCTTTTTCAA TERM 3094 3108482 - 3108511 + T 87 -12.3 -2.9916 | opp_overlap 3108482 3108489, overlap 3108489 CAGTTTGCAGAGAAA CAAAAAAGGACGC TACG GCGTCCTTTTTTC ATTTAGCTTTTTCAA TERM 3095 3108489 - 3108504 + T 100 -10.4 -5.38497 | opp_overlap 3108489 3108482, overlap 3108482 CAGAGAAACAAAAAA GGACGC TACG GCGTCC TTTTTTCATTTAGCT TERM 3096 3108504 - 3108489 - T 100 -10.4 -5.76237 | opp_overlap 3108482 3108489, overlap 3108482 CAGAGAAACAAAAAA GGACGC TACG GCGTCC TTTTTTCATTTAGCT Swoo_2542 3110811 - 3108535 - | hypothetical protein Swoo_2543 3111470 - 3110835 - | TetR family transcriptional regulator TERM 3097 3112074 - 3112058 - g 80 -4.4 -5.31519 | opp_overlap 3112058, overlap 3112060 AGATCCAAAGAAAAA TGCTGA ACTTG CCAGCA TCAGTTCAGAACTCA TERM 3098 3112634 - 3112617 - g 76 -8.5 -3.93658 | opp_overlap 3112630 AAGATGGTGAAACAA GCTGAAA GCTT TTTCAGC TCACTGGGTTTTGAG Swoo_2544 3111666 - 3113504 + | peptidyl-dipeptidase A TERM 3099 3113576 - 3113599 + F 100 -8.2 -5.9362 | opp_overlap 3113571 3113576 AAACAAAAGCTAAAA TGCTAAGCTA ATGG TTGCTTAGCA TTTTTTTATCTTTTA TERM 3100 3113599 - 3113576 - f 83 -8.2 -4.49716 | opp_overlap 3113576, overlap 3113571 AAACAAAAGCTAAAA TGCTAAGCTA ATGG TTGCTTAGCA TTTTTTTATCTTTTA Swoo_2545 3113808 - 3114377 + | hypothetical protein Swoo_2546 3114367 - 3114849 + | SecC motif-containing protein Swoo_2547 3117042 - 3114874 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 3101 3115370 - 3115357 - G 71 -4.5 -4.65895 | overlap 3115358 GTTGCCACTGAAAAA CTGCC TAGC GGCAA CATTGACGTGCATCG TERM 3102 3117081 - 3117058 - R 77 -6.8 -4.57569 | opp_overlap 3117057 TTAGCTCCCTAAAAA GAGTAAGC TTTTATCC GCTTACTC AATGTTCCATTTAAC Swoo_2548 3117485 - 3117198 - | hypothetical protein Swoo_2549 3118085 - 3117594 - | hypothetical protein TERM 3103 3118042 - 3118056 + g 72 -10 -2.84098 | opp_overlap 3118038, overlap 3118039 GCATGATTAAGGCGT GTCCCA AGT TGGGAC TCATTGATTAAAACA TERM 3104 3119946 - 3119912 - g 72 -10.2 -2.96711 | opp_overlap 3119912 3119919, overlap 3119915 TGGAGAACTTACAGA GTATGAGGCTAAATTG GCT CAATTTAACCTCACAG CTAGCTTAAACTGAT TERM 3105 3119943 - 3119915 - g 87 -14.1 -2.7159 | opp_overlap 3119912 3119919, overlap 3119912 AGAACTTACAGAGTA TGAGGCTAAATTG GCT CAATTTAACCTCA CAGCTAGCTTAAACT Swoo_2550 3118899 - 3119960 + | pyridoxal-5'-phosphate-dependent protein beta subunit Swoo_2551 3120640 - 3119972 - | radical activating enzyme Swoo_2552 3120862 - 3121563 + | exsB protein Swoo_2553 3121551 - 3122159 + | rhomboid family protein TERM 3106 3122167 - 3122151 - T 100 -12.3 -5.05577 | opp_overlap 3122146 AAACCAAAGGAAAAA GCGGAGT AAA ACTCCGC TTCAAATCTTCTTTA Swoo_2554 3124195 - 3122180 - | excinuclease ABC, B subunit TERM 3107 3124939 - 3124927 - H 74 -7.7 -4.015 | GCAGTCACGAAACAA GCTGA TAC TCAGC CACAACCAAGCCCAA Swoo_2555 3126285 - 3128189 + | diguanylate cyclase/phosphodiesterase TERM 3108 3128318 - 3128346 + G 91 -10.5 -4.70583 | AGTGAATATCTCCTA TTATTGGTAAGCA CTG TGCTTGTCAATAA TTTTGTATTAGTAAA Swoo_2556 3128300 - 3128878 + | electron transport complex, RnfABCDGE type, A subunit Swoo_2557 3128881 - 3129450 + | electron transport complex, RnfABCDGE type, B subunit TERM 3109 3129678 - 3129660 - g 74 -11 -2.65409 | opp_overlap 3129670, overlap 3129656 3129659 GAAGTATTAACCAAT GGCAGCCA TTT TGGCTACC TGCCAGTTCATGCCC TERM 3110 3131158 - 3131148 - g 77 -3.2 -5.31275 | overlap 3131157 GTCGACGATAAAAAA GCCA AGG TAGC GGCAGCAGTCGCCCG TERM 3111 3131305 - 3131295 - g 77 -3.2 -5.31275 | GTCGATGACAAAAAA GCCA AGA TAGC AGCTGCTGTGGCCCG TERM 3112 3131452 - 3131442 - g 77 -3.2 -5.31877 | ATCGATGACAAAAAA GCCA AGA TAGC GGCTGCTGTTGCCCG TERM 3113 3131540 - 3131525 - g 77 -7.6 -4.36411 | overlap 3131516 CATTAAGCACCAAAA TGATGC CGAA GCATCA GAGTCTGTACCCGAT TERM 3114 3131596 - 3131586 - g 70 -5.4 -4.35483 | GTCGACGACAAGAAA GCAA AAA TTGC AGCTGCTGTAGCTAA TERM 3115 3131729 - 3131717 - g 78 -5.5 -4.91109 | overlap 3131725 TGTTGATGACAAAAA GGCCA AGA TAGCC GCTGCTGTGGCAAAA TERM 3116 3131765 - 3131750 - g 74 -7.6 -4.19735 | overlap 3131725 TGTGGCAAAAGCAAA GGCTAA TAAA TTAGCC AAGCAAGCAAAATTA Swoo_2558 3129444 - 3131798 + | electron transport complex, RnfABCDGE type, C subunit Swoo_2559 3131802 - 3132854 + | electron transport complex, RnfABCDGE type, D subunit Swoo_2560 3132884 - 3133510 + | electron transport complex, RnfABCDGE type, G subunit Swoo_2561 3133507 - 3134205 + | electron transport complex, RnfABCDGE type, E subunit TERM 3117 3134297 - 3134268 - g 79 -7.9 -4.33803 | overlap 3134274 AAAGAGATGAATAAA GAGAAACGACAAG CGAT CTTATCGATCCTC AGAGAAAATAACCCT TERM 3118 3134291 - 3134274 - g 76 -6.3 -4.46976 | overlap 3134268 ATGAATAAAGAGAAA CGACAAG CGAT CTTATCG ATCCTCAGAGAAAAT Swoo_2562 3134259 - 3134897 + | endonuclease III TERM 3119 3134926 - 3134962 + F 95 -13.9 -3.16071 | opp_overlap 3134938, overlap 3134938 GCTATAGCTTACATT TCCATAAAAAAAGCCGC AAT GCGGCTTTTTTTATGAC TCTATTAATATAAAC TERM 3120 3134950 - 3134938 - f 100 -10.5 -5.61596 | opp_overlap 3134938 3134926 ATTTCCATAAAAAAA GCCGC AAT GCGGC TTTTTTTATGACTCT TERM 3121 3134938 - 3134950 + F 100 -10.5 -5.65177 | opp_overlap 3134938, overlap 3134926 ATTTCCATAAAAAAA GCCGC AAT GCGGC TTTTTTTATGACTCT Swoo_2563 3135197 - 3135607 + | lactoylglutathione lyase TERM 3122 3135627 - 3135648 + T 79 -8.7 -4.1891 | opp_overlap 3135627 3135628 3135643, overlap 3135628 AATCAAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3123 3135648 - 3135627 - T 79 -8.7 -4.17906 | opp_overlap 3135627 3135628, overlap 3135628 3135643 AATCAAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3124 3135647 - 3135628 - T 87 -12.2 -3.09117 | opp_overlap 3135627 3135628, overlap 3135627 3135643 ATCAAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3125 3135628 - 3135647 + T 87 -12.2 -3.11024 | opp_overlap 3135628 3135627 3135643, overlap 3135627 ATCAAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3126 3135657 - 3135675 + T 80 -10.2 -3.60214 | opp_overlap 3135643, overlap 3135658 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTATCTACTTCAAAT TERM 3127 3135658 - 3135674 + T 93 -13.7 -2.75647 | opp_overlap 3135643, overlap 3135657 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTATCTACTTCAAA Swoo_2564 3136114 - 3135680 - | transposase IS200-family protein TERM 3128 3136198 - 3136217 + r 90 -12.2 -3.57144 | opp_overlap 3136198 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 3129 3136217 - 3136198 - R 90 -12.2 -3.44319 | opp_overlap 3136198 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 3130 3136233 - 3136258 + r 81 -10.5 -3.6682 | opp_overlap 3136239, overlap 3136239 TTTAGGGCTGAAAAC AAAAAAGCGCC TTTC GGCGCTTTTTA TTTAAGTCGATAGCC TERM 3131 3136239 - 3136252 + r 100 -9.5 -5.30616 | opp_overlap 3136239, overlap 3136233 GCTGAAAACAAAAAA GCGCC TTTC GGCGC TTTTTATTTAAGTCG TERM 3132 3136252 - 3136239 - R 100 -9.5 -5.79595 | opp_overlap 3136233 3136239 GCTGAAAACAAAAAA GCGCC TTTC GGCGC TTTTTATTTAAGTCG Swoo_2565 3138813 - 3136282 - | TonB-dependent receptor TERM 3133 3139134 - 3139113 - R 72 -5.9 -4.45168 | overlap 3139125 CTTCGAAAATACAAA TTTTGTGAC ACAG GTCACAGAA CTAGCTATAACCATG TERM 3134 3139190 - 3139206 + r 76 -5.1 -5.04385 | opp_overlap 3139187, overlap 3139193 AGAATTTAAAGAGTT CAACAGA ACA TCTGTAG TTTTTTAACGCTGTA Swoo_2566 3139902 - 3139483 - | hypothetical protein Swoo_2567 3143025 - 3139963 - | hypothetical protein TERM 3135 3140582 - 3140572 - G 80 -6.8 -4.82901 | opp_overlap 3140572 3140571 GGGTTGCCACAAAAA GGAG CTG CTCC ATTTTAGTTGTGCAA TERM 3136 3143044 - 3143022 - G 84 -7 -5.06735 | opp_overlap 3143022 TAGAAAGTAGAAAAA GCATAGGCCA TGA TGACTTATGC TTTGACACTATATGA Swoo_2568 3143882 - 3143091 - | hypothetical protein TERM 3137 3143968 - 3143997 + r 79 -8.7 -3.88559 | ATGGTCTCTTTTTAA CCGCTAAATATTT AAAG AGATACTTAGCGG TTTATACAGGTACTT Swoo_2569 3144483 - 3144013 - | hypothetical protein TERM 3138 3144602 - 3144586 - H 79 -6.6 -4.75776 | AAGCTAATGTAAAAA TGCTAG TTAAG CTAGCA CCTTAAGAGCATAAG TERM 3139 3144777 - 3144827 + H 72 -8.6 -3.28122 | opp_overlap 3144786 3144788, overlap 3144771 3144773 3144784 AAAAAATATTATTTC TCCGAAGTATATTTATGGATAACA TTA TTTTACCCATAAATATATTATGGA TATATTTAACTCGTA TERM 3140 3144784 - 3144820 + H 71 -8.3 -3.43654 | opp_overlap 3144786 3144788, overlap 3144771 3144777 3144773 ATTATTTCTCCGAAG TATATTTATGGATAACA TTA TTTTACCCATAAATATA TTATGGATATATTTA TERM 3141 3145540 - 3145517 - g 74 -3.8 -5.00616 | overlap 3145518 TGTGGCGGGAAAAAA TGCAACTCCA GGTA TGAAGTCGCC TCAATACATCCTACG Swoo_2570 3144972 - 3145571 + | hypothetical protein TERM 3142 3145598 - 3145558 - T 95 -13.4 -3.18507 | overlap 3145563 AATACATCCTACGAA TTGAAGAGCAGTGAGCCT TAGGC AAGCTCCCTGCTCTGCAA ATACCATTAATTAAT TERM 3143 3145593 - 3145563 - T 87 -11.9 -3.20901 | overlap 3145558 ATCCTACGAATTGAA GAGCAGTGAGCCT TAGGC AAGCTCCCTGCTC TGCAAATACCATTAA Swoo_2571 3146632 - 3145616 - | Holliday junction DNA helicase RuvB TERM 3144 3145655 - 3145644 - G 70 -5.8 -4.39287 | overlap 3145645 3145646 TGAATGATATCAAAA TGCC GATA GGCA CGATCGGTAGCAATC Swoo_2572 3147268 - 3146651 - | Holliday junction DNA helicase RuvA Swoo_2573 3147786 - 3147265 - | crossover junction endodeoxyribonuclease RuvC TERM 3145 3147553 - 3147565 + g 74 -5.5 -4.65895 | TTGGCCTAATTTAAG TGCTG AGT CGGCA TTTTTGGCTAAAAAG Swoo_2574 3148536 - 3147790 - | hypothetical protein TERM 3146 3147842 - 3147868 + g 74 -9.6 -3.35679 | opp_overlap 3147841 3147840 GCATTATGATAAACC TCTTGAACATCA TCA TGATCTTCAAGA TTATCAATCAACCGC TERM 3147 3148199 - 3148216 + g 77 -3.3 -5.27206 | gap 1, opp_overlap 3148190 3148200, overlap 3148200 CTAAAAGCATTACGA ACGC-CGG AAA CCGTGCGG TTTTTATTATCTGTC TERM 3148 3148585 - 3148617 + r 85 -10 -4.09818 | opp_overlap 3148593, overlap 3148586 3148593 CTAGCTAAAATACGC TTAAAAAAGCCGAG ATAAA CTCGGCTTTTTTGC TTTATGCTTGCTCTT TERM 3149 3148586 - 3148616 + r 95 -13.5 -3.04806 | opp_overlap 3148593, overlap 3148585 3148593 TAGCTAAAATACGCT TAAAAAAGCCGAG ATAAA CTCGGCTTTTTTG CTTTATGCTTGCTCT TERM 3150 3148593 - 3148609 + r 100 -9.4 -5.42514 | opp_overlap 3148593, overlap 3148586 3148585 AATACGCTTAAAAAA GCCGAG ATAAA CTCGGC TTTTTTGCTTTATGC TERM 3151 3148609 - 3148593 - R 91 -9.4 -5.04987 | opp_overlap 3148593 3148586 3148585 AATACGCTTAAAAAA GCCGAG ATAAA CTCGGC TTTTTTGCTTTATGC Swoo_2575 3150406 - 3148619 - | aspartyl-tRNA synthetase Swoo_2576 3153373 - 3150578 - | diguanylate cyclase TERM 3152 3152290 - 3152309 + g 72 -7.8 -3.91897 | opp_overlap 3152277 AAGGCGCTGTAGGTA CCGCACCT ATAC GGGTGTGG TTTATCGCTGACAAG TERM 3153 3152497 - 3152508 + g 70 -5.8 -4.3739 | opp_overlap 3152481 CAGTGGCGTAGCTGA CTGG GATC CCAG TTTTCTCAGACCATA Swoo_2577 3153523 - 3154254 + | methyltransferase TERM 3154 3154301 - 3154275 - f 74 -9.5 -3.1552 | opp_overlap 3154281, overlap 3154278 GTTCACCCATTAATA CAAGGAGAGCC AACTA AGCTCTCCTTA ACATCTATGCTTTAT TERM 3155 3154298 - 3154278 - f 76 -9 -3.71998 | opp_overlap 3154281, overlap 3154275 CACCCATTAATACAA GGAGAGCC AACTA AGCTCTCC TTAACATCTATGCTT Swoo_2578 3154346 - 3155338 + | methyltransferase TERM 3156 3155815 - 3155786 - g 70 -6.5 -4.21194 | overlap 3155787 GTTGAGGAGGTAAAA GCCAGTTTCAATA CTCG TATTGATACTGGT GCAGAGTCATCATCC TERM 3157 3155814 - 3155787 - g 73 -10 -3.12395 | overlap 3155786 TTGAGGAGGTAAAAG CCAGTTTCAATA CTCG TATTGATACTGG TGCAGAGTCATCATC Swoo_2579 3155435 - 3156181 + | hypothetical protein Swoo_2580 3156192 - 3157706 + | gonadoliberin III-related protein Swoo_2581 3157706 - 3158668 + | alpha-L-glutamate ligase-like protein TERM 3158 3158689 - 3158706 + GF 100 -14.1 -3.55444 | opp_overlap 3158689 TACTAACAGTTACAA CGGCGGC TCAG GCCGCCG TTTCACCACTGCCCA TERM 3159 3158706 - 3158689 - gf 100 -14.1 -3.43217 | opp_overlap 3158689 TACTAACAGTTACAA CGGCGGC TCAG GCCGCCG TTTCACCACTGCCCA TERM 3160 3159981 - 3159991 + GF 70 -6.8 -4.03085 | CTAAAAGTATTTCGC GCCA AAG TGGC TTTAAATTTTTATCA Swoo_2582 3158631 - 3160364 + | response regulator receiver protein TERM 3161 3160470 - 3160454 - gf 79 -5.9 -4.86001 | opp_overlap 3160454 ATGATGGCATAAAAA GTAATCT TGA AGATCAC CTTTATCAGCTACCT Swoo_2583 3160318 - 3161418 + | hypothetical protein TERM 3162 3161469 - 3161413 - f 83 -8.2 -4.52589 | gap 2, opp_overlap 3161422 3161423 3161424 CTCGTCGAGATAAAA CAATAGTTTTAACCCCGTTGGCTTGAGC AGT GCTCAAGCCAAC-GGGC-AATGTTATCG ACCACAATGGGATCG TERM 3163 3161422 - 3161463 + F 100 -13.1 -3.28924 | gap 1, opp_overlap 3161413, overlap 3161423 3161424 ATAAAACAATAGTTT TA-ACCCCGTTGGCTTGAGC AGT GCTCAAGCCAACGGGCAATG TTATCGACCACAATG TERM 3164 3161423 - 3161461 + F 100 -16 -3.21276 | opp_overlap 3161413, overlap 3161422 3161424 TAAAACAATAGTTTT AACCCCGTTGGCTTGAGC AGT GCTCAAGCCAACGGGCAA TGTTATCGACCACAA TERM 3165 3161424 - 3161460 + F 100 -19.5 -2.52623 | opp_overlap 3161413, overlap 3161423 3161422 AAAACAATAGTTTTA ACCCCGTTGGCTTGAGC AGT GCTCAAGCCAACGGGCA ATGTTATCGACCACA TERM 3166 3162297 - 3162286 - g 77 -3.6 -5.30686 | AACACCCACAAAAAA GCGC TATT GCAC TTGGTGATCCCAAAT Swoo_2584 3161488 - 3162387 + | LysR family transcriptional regulator Swoo_2585 3163691 - 3162384 - | SrpA-related protein Swoo_2586 3163969 - 3163697 - | hypothetical protein TERM 3167 3164079 - 3164092 + r 73 -4.5 -4.89852 | opp_overlap 3164079 CCCAACTAAAAAGTA CAGTG TTAA CGCTG TTTTTATGCCTGTCC Swoo_2587 3165233 - 3164124 - | thiazole biosynthesis protein ThiH Swoo_2588 3166037 - 3165270 - | thiazole biosynthesis family protein Swoo_2589 3166248 - 3166039 - | thiamine biosynthesis protein ThiS Swoo_2590 3167042 - 3166248 - | UBA/THIF-type NAD/FAD binding protein Swoo_2591 3168636 - 3167029 - | phosphomethylpyrimidine kinase Swoo_2592 3170598 - 3168640 - | thiamine biosynthesis protein ThiC Swoo_2593 3172076 - 3171015 - | hypothetical protein TERM 3168 3172318 - 3172297 - H 79 -3.7 -5.42975 | TCATATAAATAAAAA TAAGCTTAC ACGT GTACGCTCA ATGCTAGTGTTAGCT TERM 3169 3172582 - 3172594 + G 73 -6.3 -4.36348 | CTAGGTGTTGTGATC TACTG TAG CAGTA TTATTTTACTCTTTT Swoo_2594 3172387 - 3173067 + | hemolysin III family channel protein Swoo_2595 3173581 - 3173075 - | DTW domain-containing protein TERM 3170 3174133 - 3174151 + G 74 -10.3 -3.14132 | GAGTTAACGTTAGTG GTGCAGC TCAAT GCTGCAC TTCATCCAGCACAAC Swoo_2596 3173701 - 3175074 + | integral membrane sensor signal transduction histidine kinase TERM 3171 3175133 - 3175110 - T 100 -11.8 -4.61231 | opp_overlap 3175110 TCATATCGTTAAAAA GCCCATTACC TAAA GATAATGGGC TTTTTAATTGAAATA TERM 3172 3175110 - 3175133 + T 91 -9.6 -4.87291 | opp_overlap 3175110 TCATATCGTTAAAAA GCCCATTACC TAAA GATAATGGGC TTTTTAATTGAAATA Swoo_2597 3175651 - 3175160 - | peptide deformylase TERM 3173 3175237 - 3175253 + g 71 -9.5 -3.02829 | opp_overlap 3175231 TAAACACGACGCCAT TGAGATG ATC CATCTCA TGTTGAAGCACTATC TERM 3174 3175681 - 3175691 + H 76 -5.4 -4.89054 | AGAGAAAAATTTGGC GTCA TTA TGAC TTATTTTTTTCTAAA TERM 3175 3175758 - 3175768 + H 76 -5.4 -4.88067 | TCAATTTCATAGGCT TGCA ACG TGCA TTTTTATCGATAAAT Swoo_2598 3175862 - 3177589 + | major facilitator transporter Swoo_2599 3178348 - 3177659 - | hypothetical protein Swoo_2600 3178618 - 3178971 + | methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding Swoo_2601 3179130 - 3179897 + | hypothetical protein Swoo_2602 3181355 - 3179973 - | hypothetical protein TERM 3176 3181404 - 3181384 - R 79 -8.5 -4.11394 | overlap 3181397 ATCTTATTGTTAAAA TTACAATAT CAA ATATTGTAA ATAAGAAAATAAATA TERM 3177 3181957 - 3181943 - R 73 -2.9 -5.24129 | GCCCTTTAGAAAAAA TTTCT AATAA AGAAA ACTAATCACACTTAG Swoo_2603 3182783 - 3182013 - | glutamine amidotransferase class-II TERM 3178 3182888 - 3182866 - H 75 -2.2 -5.35224 | TGTACAAAAACAAAA TATTTAAA CGTTTGT TTTAAATA ATGCTTGTATTAAAT TERM 3179 3182993 - 3182979 - H 83 -8.6 -4.2338 | overlap 3182976 3182989 GATCAATATAAATAA TTGGCT AAC AGCCAA TCGATAGGCCGCCTT TERM 3180 3183531 - 3183508 - g 82 -8.9 -4.21194 | opp_overlap 3183495 3183510 TGGCAGTATCTAAAA GATCACGGC TTCTTT GCCATGATC ATTAAAAAGAAATAT TERM 3181 3185169 - 3185136 - g 72 -10.3 -2.90583 | opp_overlap 3185135 3185137, overlap 3185135 3185167 TAAGATAATGCAAAC TCCTTGTGCTAGCCG AGAC CGACTAGCAAAAGGT CAGTTCTTAACCGCA TERM 3182 3185137 - 3185168 + G 77 -11.6 -2.6563 | opp_overlap 3185136 3185135 3185167, overlap 3185135 AAGATAATGCAAACT CCTTGTGCTAGCCG AGAC CGACTAGCAAAAGG TCAGTTCTTAACCGC Swoo_2604 3183025 - 3185472 + | hypothetical protein TERM 3183 3185486 - 3185521 + T 83 -10.6 -3.86312 | opp_overlap 3185496, overlap 3185489 3185496 AACGTTTTAAGTTGT TAATAAAAAAGGAGGC TAAC GCCTCCTTTTTTATAC TTGTTACTTCTACGT TERM 3184 3185489 - 3185518 + T 100 -16.7 -3.00018 | opp_overlap 3185496, overlap 3185486 3185496 GTTTTAAGTTGTTAA TAAAAAAGGAGGC TAAC GCCTCCTTTTTTA TACTTGTTACTTCTA TERM 3185 3185496 - 3185511 + T 100 -10.4 -5.4111 | opp_overlap 3185496, overlap 3185489 3185486 GTTGTTAATAAAAAA GGAGGC TAAC GCCTCC TTTTTTATACTTGTT TERM 3186 3185511 - 3185496 - T 100 -10.4 -5.4505 | opp_overlap 3185489 3185486 3185496 GTTGTTAATAAAAAA GGAGGC TAAC GCCTCC TTTTTTATACTTGTT Swoo_2605 3187444 - 3185531 - | sodium/hydrogen exchanger TERM 3187 3187693 - 3187658 - R 76 -9.8 -3.15996 | opp_overlap 3187665, overlap 3187645 3187665 TATGACTTACTAAGA CAAAAAAGCCCTCATC TTTC GACAAGGGCTTCATTG TGTTCGCTTAACGCG TERM 3188 3187686 - 3187665 - R 100 -8.7 -5.49569 | opp_overlap 3187665, overlap 3187658 TACTAAGACAAAAAA GCCCTCATC TTTC GACAAGGGC TTCATTGTGTTCGCT TERM 3189 3187764 - 3187736 - R 86 -9.8 -4.30987 | gap 1, opp_overlap 3187744 AGTTGTCATAATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACAGAAACGA TERM 3190 3187813 - 3187778 - R 95 -14.2 -3.12685 | opp_overlap 3187785, overlap 3187785 ACAAGACACAGAAAC GAAAAAAGCCTCTACA TTGC TGTAGAGGCTTTCATC TTTATGCTGGCGGAG TERM 3191 3187785 - 3187806 + r 100 -13.1 -4.05181 | opp_overlap 3187778 3187785 ACAGAAACGAAAAAA GCCTCTACA TTGC TGTAGAGGC TTTCATCTTTATGCT TERM 3192 3187806 - 3187785 - R 100 -13.1 -5.4387 | opp_overlap 3187785, overlap 3187778 ACAGAAACGAAAAAA GCCTCTACA TTGC TGTAGAGGC TTTCATCTTTATGCT TERM 3193 3188256 - 3188232 - R 75 -4.3 -5.08824 | opp_overlap 3188232 3188227 TGTTCAGTCAAAAAA GCAGCAACC GGAAGGA AATTGCTGC TTTTATTCATGAAAA Swoo_2606 3189629 - 3188313 - | hypothetical protein Swoo_2607 3190368 - 3189640 - | DNA polymerase III, epsilon subunit TERM 3194 3189888 - 3189870 - G 75 -11 -2.8552 | opp_overlap 3189870 3189881, overlap 3189869 3189881 CCGCATCGAGTAAAG CGCCGTGA AGA TCACGACG TGAATTGTCAATGCC Swoo_2608 3190436 - 3190921 + | ribonuclease H Swoo_2609 3191817 - 3190918 - | LysR family transcriptional regulator Swoo_2610 3192613 - 3191867 - | hypothetical protein Swoo_2611 3192842 - 3193633 + | hydroxyacylglutathione hydrolase Swoo_2612 3193723 - 3195276 + | lytic transglycosylase catalytic TERM 3195 3195328 - 3195300 - T 100 -11.7 -5.68023 | opp_overlap 3195300 TTAGAACGAAAAAAA GCCAGTGGATGTC AAT GACAAACACTGGC TTTTTTATGCCGATA TERM 3196 3195300 - 3195328 + T 100 -11.7 -5.252 | opp_overlap 3195300 TTAGAACGAAAAAAA GCCAGTGGATGTC AAT GACAAACACTGGC TTTTTTATGCCGATA Swoo_2613 3195936 - 3195346 - | intracellular proteinase inhibitor domain-containing protein TERM 3197 3195821 - 3195838 + g 71 -9.9 -3.04398 | opp_overlap 3195824, overlap 3195820 TGCTCTTTAGGCATA TCAGCCT CCAC AGGCTGA GTTTTAGCAACCGAA Swoo_2614 3197756 - 3195936 - | AsmA family protein TERM 3198 3196407 - 3196425 + g 83 -3.9 -5.4659 | gap 1, opp_overlap 3196407 ATCAGCAATCTCAAA CTTA-CCG TTCG CGGCTAAG TTTTTCTTTATATTA Swoo_2615 3198280 - 3197786 - | regulator of ribonuclease activity A Swoo_2616 3198492 - 3198815 + | hypothetical protein Swoo_2617 3200507 - 3198861 - | methyl-accepting chemotaxis sensory transducer Swoo_2618 3201361 - 3200720 - | ferric reductase domain-containing protein TERM 3199 3201409 - 3201385 - R 95 -13 -3.52111 | CCAAAACGAGGAGAA GCTTGCTTTG AGCGA CAAAGCAAGC TAAGTGAGTATTAAT Swoo_2619 3202436 - 3201420 - | oxidoreductase molybdopterin binding TERM 3200 3201716 - 3201726 + g 72 -6.8 -4.15565 | opp_overlap 3201704 3201716 3201711 GAACCACTAATCTAA TGGG CGC CCCA TTTTGAGGTGGTAAG TERM 3201 3203046 - 3203033 - g 72 -3.1 -4.88918 | opp_overlap 3203045, overlap 3203044 TCAGCTCAAAGAAAA TCAGC GTAA ACTGA TGGAAGCCCAGCTTG TERM 3202 3203688 - 3203670 - g 72 -7.4 -4.11371 | opp_overlap 3203670 3203672, overlap 3203673 GAAGATGTGCGAAAA CAGGCTCT TAA AGAGCATG TAATTTCGGTTCGTG Swoo_2620 3202710 - 3204206 + | hypothetical protein TERM 3203 3204599 - 3204630 + G 89 -8.6 -4.77438 | overlap 3204600 GATACCGCTACCTCA ATCGCGCCGGCGCT CAAA AGCGCTGGAGTGAC TTTTTAGTCGTCAGT TERM 3204 3204600 - 3204629 + G 88 -12.1 -3.4574 | overlap 3204599 ATACCGCTACCTCAA TCGCGCCGGCGCT CAAA AGCGCTGGAGTGA CTTTTTAGTCGTCAG TERM 3205 3204931 - 3204916 - g 87 -6 -5.28778 | ACGACTCAGAAAAAA GCCGCC AAAA GGCTGC TGAGCGTCTATAAAG Swoo_2621 3204256 - 3206208 + | lytic transglycosylase catalytic TERM 3206 3206245 - 3206287 + F 71 -8.5 -3.49756 | opp_overlap 3206249 CTATCACAATCTCAC GATAGGCTAATGAATGGAA AATGA TCCCTTTCATTGGCCTAAC TTCTAATAATTGTTG Swoo_2622 3206399 - 3207127 + | diguanylate phosphodiesterase Swoo_2623 3207225 - 3208136 + | ATPase Swoo_2624 3208155 - 3209144 + | hypothetical protein TERM 3207 3210435 - 3210420 - g 93 -9 -4.89852 | opp_overlap 3210409 TTATAGCCAGAAAAA CTGGCA TTCC TGCCAG ACTCGTCACAGGCTA Swoo_2625 3209141 - 3211144 + | transglutaminase domain-containing protein TERM 3208 3211505 - 3211480 - g 78 -5.5 -4.95957 | CAAACGAAGGAAAAA TGAATCTGC TCAATTTT GCAGATCCA AAAATAAAAATGCTT TERM 3209 3212245 - 3212255 + G 76 -5.4 -4.81306 | overlap 3212237 ACATCATGTGGTTGT CACT CTT AGTG TTATTTTTTATTCAG Swoo_2626 3211461 - 3212936 + | major facilitator transporter Swoo_2627 3213012 - 3214742 + | protein serine/threonine phosphatase Swoo_2628 3214942 - 3215337 + | hypothetical protein TERM 3210 3215833 - 3215860 + G 93 -2.7 -5.86061 | opp_overlap 3215833 GCTAACGTCCATGAA CTGGGTTACTA CTTTAT TATTATCCCAG TTTTTTTTAATGCCA Swoo_2629 3215449 - 3215943 + | HPP family protein? TERM 3211 3215990 - 3215972 - T 100 -13.2 -4.83615 | opp_overlap 3215975 TATTGCCCACAAAAA GGAGAGCA ATT TGCTCTCC TTAACAGCACAATAT Swoo_2630 3216825 - 3216013 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3212 3217042 - 3217012 - R 79 -9.2 -3.75937 | opp_overlap 3217012 ATATAGAGAGTCAAA TAGAGATAAGTAAA ACA TCTACCTATCCCTA TTAATTTAAAACGTA Swoo_2631 3217750 - 3217073 - | respiratory nitrate reductase, gamma subunit Swoo_2632 3218491 - 3217760 - | nitrate reductase molybdenum cofactor assembly chaperone Swoo_2633 3220032 - 3218494 - | nitrate reductase, beta subunit Swoo_2634 3223848 - 3220045 - | nitrate reductase, alpha subunit TERM 3213 3220376 - 3220356 - G 71 -8.3 -3.55071 | TTACACGTTGTGAAA CTACCGCAC GAC ATGCGATAG CACCGTTGGCATTGA Swoo_2635 3225580 - 3223976 - | major facilitator transporter TERM 3214 3225544 - 3225562 + g 79 -3.8 -5.21709 | overlap 3225534 3225532 CACTATCCCAAAACT TGGGATCT TCT ACGTCCCA TTTTTTGATATCAGA TERM 3215 3225917 - 3225907 - H 73 -4 -5.15167 | TAGTAGTAACAAAAA CAAA ACA TTTG GCTGGTATTTATCGA TERM 3216 3227014 - 3227002 - g 77 -3.3 -5.28983 | CCCAAAAGATAAAAA CCCTG AAG CATGG CAGCGACAGTTACTT Swoo_2636 3225956 - 3227707 + | integral membrane sensor signal transduction histidine kinase Swoo_2637 3227738 - 3228379 + | two component LuxR family transcriptional regulator Swoo_2638 3228436 - 3229041 + | CBS domain-containing protein Swoo_2639 3229054 - 3229638 + | hypothetical protein Swoo_2640 3230940 - 3229666 - | major facilitator transporter TERM 3217 3229881 - 3229918 + g 74 -10.7 -2.50077 | gap 1, overlap 3229880 3229878 3229875 TTGCAGCCACTATTC CTCCGA-CACTGCCCATA TGA TGTGGGTAGTGATCGTAG ATAGTTTTATACACG TERM 3218 3230435 - 3230409 - G 80 -6.6 -4.7657 | CAAAAAGTCTAAAAA GAATCGCCATAA AGA TCATGCCGATCC CATAGGCGTACCCAA TERM 3219 3231053 - 3231069 + H 86 -8.1 -4.56597 | TAACATAAGCAGGTT TTGATGT CCT ACATCAA TTTTTAGCAAACAAA TERM 3220 3231645 - 3231633 - g 71 -7.7 -3.76839 | CAATCCCAACCTAAA CTCAG TTT CTGAG CAGAGCTCTGATAAT TERM 3221 3233096 - 3233114 + G 71 -3.8 -4.85599 | TGCGTATGGCCCAGC TCAATCAG CTA CTGGATGA TTTTTATGAGGTGGA TERM 3222 3233636 - 3233626 - g 72 -6.8 -4.24285 | GAGACATTCAACAAA CTCG ACT CGAG TGATGCTGAAACCGT TERM 3223 3234118 - 3234106 - g 76 -5.5 -4.7497 | GCGATTGAGCAAAAA CTGGA AGC CCCAG ACGAAACGCTATTAC Swoo_2641 3231271 - 3234843 + | exodeoxyribonuclease V, gamma subunit TERM 3224 3237404 - 3237390 - g 73 -2.7 -5.14563 | CGCTTTACCAAAAAA GCGGG GATCA CCAGC CAGCTCCATGAAACT Swoo_2642 3234843 - 3238532 + | exodeoxyribonuclease V, beta subunit TERM 3225 3239046 - 3239036 - g 74 -6.8 -4.35742 | ATTCAACTATCAAAA GAGC CAG GCTC TCAAGTTTCACCAGC TERM 3226 3239757 - 3239741 - g 71 -9.5 -3.09516 | opp_overlap 3239741 3239738 CTCTTTACCAGTGAA TCACCAA AAA TTGGTGA TAGTCTCTGCATGTT TERM 3227 3240151 - 3240113 - g 73 -6 -4.31379 | overlap 3240115 3240122 ACTAATGCACTAAAA CAGGCAAAACTCATCACC ACT GATGTCGAGTTTTACCAA GGCCGCCCAGTAATA TERM 3228 3240149 - 3240115 - g 85 -10.8 -3.75571 | overlap 3240113 3240122 TAATGCACTAAAACA GGCAAAACTCATCACC ACT GATGTCGAGTTTTACC AAGGCCGCCCAGTAA Swoo_2643 3238529 - 3240577 + | exodeoxyribonuclease V, alpha subunit Swoo_2644 3240596 - 3241225 + | hypothetical protein Swoo_2645 3242264 - 3241305 - | integron integrase TERM 3229 3241918 - 3241928 + g 72 -5.4 -4.45945 | opp_overlap 3241918 TAATTTGATAAGAAA CTGA TAA TCAG TTTTGCTTCATCGCT TERM 3230 3241928 - 3241918 - G 70 -5.4 -4.33248 | opp_overlap 3241918 TAATTTGATAAGAAA CTGA TAA TCAG TTTTGCTTCATCGCT TERM 3231 3242510 - 3242533 + G 83 -11 -3.57783 | TGATCTCGTTTGTCC TGTCTGCCAG CAAG CTGGCCGACA TTATGATTCTCGTCC Swoo_2646 3242373 - 3243596 + | transposase IS204/IS1001/IS1096/IS1165 family protein Swoo_2647 3243933 - 3244265 + | hypothetical protein Swoo_2648 3244363 - 3244866 + | hypothetical protein Swoo_2649 3245003 - 3246286 + | hypothetical protein TERM 3232 3246336 - 3246280 - f 78 -10.4 -3.11564 | gap 2, opp_overlap 3246296 3246297 3246299, overlap 3246295 3246296 GAAATTGAGCGAAGA CACCTAACAAGTAAATCCAGGTGACGCC TAC GGCG-CACCTG-ATTTAGGCGTTAGCTG TTCAATGTGGCAGTG TERM 3233 3246322 - 3246295 - f 79 -8.4 -4.08689 | gap 1, opp_overlap 3246296 3246297 3246299, overlap 3246280 3246296 CACCTAACAAGTAAA TCCAGGTGACGCC TAC GGCG-CACCTGAT TTAGGCGTTAGCTGT TERM 3234 3246321 - 3246296 - f 87 -11.9 -3.0449 | gap 1, opp_overlap 3246296 3246297 3246299, overlap 3246295 3246280 ACCTAACAAGTAAAT CCAGGTGACGCC TAC GGCG-CACCTGA TTTAGGCGTTAGCTG TERM 3235 3246296 - 3246321 + F 80 -9.7 -3.61268 | gap 1, opp_overlap 3246295 3246280 3246296, overlap 3246297 3246299 ACCTAACAAGTAAAT CCAGGTGACGCC TAC GGCG-CACCTGA TTTAGGCGTTAGCTG TERM 3236 3246297 - 3246320 + F 93 -13.2 -2.7644 | gap 1, opp_overlap 3246296 3246295 3246280, overlap 3246296 3246299 CCTAACAAGTAAATC CAGGTGACGCC TAC GGCG-CACCTG ATTTAGGCGTTAGCT TERM 3237 3246299 - 3246318 + F 75 -10 -2.92667 | gap 1, opp_overlap 3246296 3246295 3246280, overlap 3246297 3246296 TAACAAGTAAATCCA GGTGACGCC TAC GGCG-CACC TGATTTAGGCGTTAG Swoo_2650 3246380 - 3246988 + | Ion transport 2 domain-containing protein Swoo_2651 3247191 - 3247655 + | hypothetical protein TERM 3238 3247686 - 3247717 + T 77 -5.8 -4.79451 | overlap 3247687 TGTTTAAGAGTGATT CGCAACGCTTGGCA TTTT TGCTATGTGTTGCA TTTTGTGTTTAAGGT TERM 3239 3247687 - 3247716 + T 77 -9.3 -3.46586 | overlap 3247686 GTTTAAGAGTGATTC GCAACGCTTGGCA TTTT TGCTATGTGTTGC ATTTTGTGTTTAAGG Swoo_2653 3249316 - 3248336 - | hypothetical protein TERM 3240 3248370 - 3248384 + g 76 -4.2 -5.13344 | overlap 3248367 3248366 CGATGACAATTTGCA GCGC CTTGCCT GCGC TTTTTCTCTTGATGT TERM 3241 3249802 - 3249818 + H 76 -5.2 -5.06451 | opp_overlap 3249794 3249802 TGTAGAATAACTAAA TTAGTC AAAAC GACTAA TTTTTTGAGCTCCTG Swoo_2654 3249955 - 3250317 + | hypothetical protein Swoo_2655 3250455 - 3250700 + | hypothetical protein Swoo_2656 3250812 - 3251249 + | acyltransferase domain-containing protein Swoo_2657 3252500 - 3251334 - | major facilitator transporter TERM 3242 3252602 - 3252634 + H 80 -2.8 -5.54192 | opp_overlap 3252588 TTAGTTTATTTTTAT GAAACAAAAATCAC CTACT GTTGTTTTTGTTAC TTTTTTTAACTTAAT TERM 3243 3253739 - 3253727 - g 71 -9.1 -3.29511 | opp_overlap 3253727 TGTATTTGGCGAGAA CGTGC CGA GCACG TATTAAGCGTAAACC Swoo_2658 3252671 - 3254389 + | IucA/IucC family protein TERM 3244 3254509 - 3254457 - T 100 -19.6 -2.96152 | opp_overlap 3254465 3254470, overlap 3254465 3254470 AGATTAACCTAGAGA GCTGAAAAGGAAACCATCAACACT AGTTA AGTATTGATGGTTTCCTTTTCAAA CCACTTACATCATTA TERM 3245 3254465 - 3254501 + T 100 -15.4 -4.08692 | opp_overlap 3254465 3254457 3254470, overlap 3254470 CTAGAGAGCTGAAAA GGAAACCATCAACACT AGTTA AGTATTGATGGTTTCC TTTTCAAACCACTTA TERM 3246 3254501 - 3254465 - T 100 -17.6 -4.18401 | opp_overlap 3254465 3254470, overlap 3254457 3254470 CTAGAGAGCTGAAAA GGAAACCATCAACACT AGTTA AGTATTGATGGTTTCC TTTTCAAACCACTTA TERM 3247 3254470 - 3254496 + T 79 -8.1 -4.19735 | opp_overlap 3254465 3254457 3254470, overlap 3254465 GAGCTGAAAAGGAAA CCATCAACACT AGTTA AGTATTGATGG TTTCCTTTTCAAACC TERM 3248 3254496 - 3254470 - T 87 -10.3 -4.20806 | opp_overlap 3254470 3254465, overlap 3254465 3254457 GAGCTGAAAAGGAAA CCATCAACACT AGTTA AGTATTGATGG TTTCCTTTTCAAACC Swoo_2659 3255125 - 3254559 - | hypothetical protein Swoo_2660 3255716 - 3256669 + | hydrolase (secreted protein) Swoo_2661 3258327 - 3256702 - | transcriptional regulator, CadC Swoo_2662 3258519 - 3260864 + | TonB-dependent receptor TERM 3249 3260980 - 3260955 - f 85 -9.7 -4.08945 | opp_overlap 3260954 3260955 ATCATTTGGGTAAAA GTCGGGAGAAG TTAA CTCCTCCCCAC CTTTGCCCTGCCAAT Swoo_2663 3261083 - 3261634 + | hypothetical protein TERM 3250 3261668 - 3261643 - f 81 -10.5 -3.3858 | opp_overlap 3261643 3261649, overlap 3261632 3261647 3261649 AAAGTAACCCCATAA TAAATAGGCCC TTAG GGGCCTTTTTA TCTATCTAGTTATTC TERM 3251 3261643 - 3261668 + F 78 -10.5 -3.08176 | opp_overlap 3261632 3261643 3261647 3261649, overlap 3261649 AAAGTAACCCCATAA TAAATAGGCCC TTAG GGGCCTTTTTA TCTATCTAGTTATTC TERM 3252 3261664 - 3261647 - f 76 -6.9 -4.33248 | opp_overlap 3261643 3261649, overlap 3261643 3261632 3261649 TAACCCCATAATAAA TAGGCCC TTAG GGGCCTT TTTATCTATCTAGTT TERM 3253 3261649 - 3261662 + F 91 -9.5 -5.07275 | opp_overlap 3261649 3261647 3261643 3261632, overlap 3261643 ACCCCATAATAAATA GGCCC TTAG GGGCC TTTTTATCTATCTAG TERM 3254 3261662 - 3261649 - f 79 -9.5 -3.76219 | opp_overlap 3261643 3261649, overlap 3261647 3261643 3261632 ACCCCATAATAAATA GGCCC TTAG GGGCC TTTTTATCTATCTAG Swoo_2664 3261782 - 3263869 + | putative PAS/PAC sensor protein TERM 3255 3263918 - 3263894 - T 80 -6.3 -5.05601 | opp_overlap 3263893 3263914 3263916, overlap 3263895 3263896 TAGCAGATATAAAAA GCGCCCTGCTC TAA AAGCAGGGCTA ATGCCTTAGTCTAGT TERM 3256 3263917 - 3263895 - T 80 -9.8 -3.62276 | opp_overlap 3263893 3263914 3263916, overlap 3263894 3263896 AGCAGATATAAAAAG CGCCCTGCTC TAA AAGCAGGGCT AATGCCTTAGTCTAG TERM 3257 3263916 - 3263896 - T 93 -13.3 -2.76281 | opp_overlap 3263893 3263914, overlap 3263895 3263894 GCAGATATAAAAAGC GCCCTGCTC TAA AAGCAGGGC TAATGCCTTAGTCTA Swoo_2665 3264446 - 3263970 - | hypothetical protein TERM 3258 3264124 - 3264108 - G 73 -6.5 -4.38712 | opp_overlap 3264111, overlap 3264111 TTCAGGCCCATAAAA GATCGGT CGA ACCGTTC CTCCATCTCCCTCAC TERM 3259 3264623 - 3264597 - R 100 -10.9 -5.24531 | ATCGCTTATAAAAAA GCTGAGAGTAC TTCAC GTGCTCTCAGC CTAACGTAAAACCTC Swoo_2666 3266841 - 3264646 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 3260 3264915 - 3264905 - G 77 -6.8 -4.52589 | opp_overlap 3264904 3264905 TTGGCGTAGATAAAA CCTG TCG CAGG CTTAGTCATCACATA TERM 3261 3266903 - 3266872 - R 83 -11.6 -3.15544 | TTGTAGTTTGATGAA GGCCAAAGACAAAC TCAG GATTGCCTCTGGCC ACAAAAGAGATAACA Swoo_2667 3267365 - 3267150 - | putative transmembrane lysine/arginine export protein TERM 3262 3267305 - 3267289 - G 75 -4.3 -4.90321 | AAAAAGAACACAAAA GAGCCTG AAA CAGCCCC TAGAGTAAACCACTC Swoo_2668 3267752 - 3267393 - | lysine exporter protein (LysE/YggA) Swoo_2669 3268505 - 3267861 - | hypothetical protein Swoo_2670 3269250 - 3268543 - | hypothetical protein TERM 3263 3268671 - 3268658 - G 71 -5.3 -4.56597 | overlap 3268669 TGTCTTCGCCAAAAA CTCAT CAAA ATGAG CACGGCGCCTAAGAC Swoo_2671 3269772 - 3269359 - | hypothetical protein Swoo_2672 3270373 - 3269969 - | hypothetical protein TERM 3264 3270878 - 3270888 + G 74 -8.2 -4.12456 | CCCTGCTCTGGTATA CCGC CAG GCGG TTTTAACGATGGTAT TERM 3265 3270998 - 3270975 - g 74 -11 -2.63616 | overlap 3270974 AGGAGGAACATCAAG CCACCATCTC AGAT GTGATGGTGG AAACCATGGTCAACT Swoo_2673 3270638 - 3272587 + | thiamine pyrophosphate binding domain-containing protein TERM 3266 3272606 - 3272632 + F 78 -10.2 -3.27923 | opp_overlap 3272611 GATAGATAGCTCTCA GTGAACCTCTAT CTA AAAGGGGTTCAC TTCCTCCTCTTACAA TERM 3267 3272785 - 3272772 - g 87 -8.1 -5.01732 | AATGGTTGCAAAAAA TGGCG ATTA CGCCA TAGTGAGCCAGCAAC Swoo_2674 3272758 - 3273837 + | D-alanine--D-alanine ligase TERM 3268 3273874 - 3273848 - T 100 -13.8 -3.53722 | opp_overlap 3273853, overlap 3273853 CGTAGAGCTAGATAA GAAAAGCCAGAG TTC CTCTGGCTTTAC CCACTAAATTGACAG TERM 3269 3273869 - 3273853 - T 100 -12.3 -4.84914 | opp_overlap 3273853, overlap 3273848 AGCTAGATAAGAAAA GCCAGAG TTC CTCTGGC TTTACCCACTAAATT TERM 3270 3273853 - 3273869 + T 90 -12.3 -3.5594 | opp_overlap 3273853 3273848 AGCTAGATAAGAAAA GCCAGAG TTC CTCTGGC TTTACCCACTAAATT Swoo_2675 3275083 - 3273878 - | Na+ dependent nucleoside transporter TERM 3271 3275269 - 3275246 - R 88 -11.2 -4.25389 | opp_overlap 3275246 ATCATAAGAGATAAA GATTATTTCC CCTT GGAAATAATC TTTTATTATCAGGAA TERM 3272 3275246 - 3275269 + r 91 -11.2 -4.77165 | opp_overlap 3275246 ATCATAAGAGATAAA GATTATTTCC CCTT GGAAATAATC TTTTATTATCAGGAA Swoo_2676 3276271 - 3275300 - | LysR family transcriptional regulator Swoo_2677 3276452 - 3277396 + | LysR family transcriptional regulator TERM 3273 3277435 - 3277454 + T 100 -12.2 -4.85129 | opp_overlap 3277435 TAACCCATTAAAAAA GCCAACAG CATG CTGTTGGC TTTTTAGTCTGTGAT TERM 3274 3277454 - 3277435 - T 100 -12.2 -5.18357 | opp_overlap 3277435 TAACCCATTAAAAAA GCCAACAG CATG CTGTTGGC TTTTTAGTCTGTGAT Swoo_2678 3278083 - 3277484 - | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome Swoo_2679 3278586 - 3278092 - | nitrate reductase cytochrome c-type subunit (NapB) Swoo_2680 3281093 - 3278598 - | periplasmic nitrate reductase, large subunit TERM 3275 3278805 - 3278820 + g 71 -4.6 -4.63928 | opp_overlap 3278818 CTTAACCTCATCACC GCGTCG CAAC CCACGC TTTTTAGCATCATCT TERM 3276 3281040 - 3281058 + g 80 -11 -3.30701 | opp_overlap 3281032 3281036, overlap 3281036 3281035 3281037 TAATCCAGCAACGCT TGCAGCGG TTA TCGCTGCA TTGGCTTTCATAAAC Swoo_2681 3281347 - 3281090 - | NapD family protein Swoo_2682 3281549 - 3281391 - | periplasmic nitrate reductase NapE TERM 3277 3282014 - 3282031 + r 73 -8.4 -3.57119 | opp_overlap 3282014 ACGAGTAATAAAAAA GCGCAG ACCAAG CTGCGC TTTAAACAATATATG TERM 3278 3282031 - 3282014 - R 100 -8.4 -5.52023 | opp_overlap 3282014 ACGAGTAATAAAAAA GCGCAG ACCAAG CTGCGC TTTAAACAATATATG Swoo_2683 3285952 - 3282077 - | ATP-dependent helicase HrpA TERM 3279 3285103 - 3285085 - G 71 -5.2 -4.52873 | opp_overlap 3285085 3285088, overlap 3285082 3285089 CGTTCATAAAAATAA GAATGTCC CCA GGACCCTC TTTAGTCAGCTCATC Swoo_2684 3287178 - 3286063 - | diguanylate cyclase Swoo_2685 3287702 - 3287286 - | signal transduction protein Swoo_2686 3288912 - 3287854 - | peptidase T2 asparaginase 2 TERM 3280 3288865 - 3288821 - G 85 -10.2 -4.21142 | gap 1, overlap 3288817 3288861 3288863 ATCGCAATAGAGAAA GGCT-TTTCATCGGCAACAAC TTGA GTTGATGACGATAAAATAGCC AACAGTAGGCCAGTA TERM 3281 3290851 - 3290823 - g 77 -10.3 -3.53012 | GGTGTCGGCCTTAAA GGGACTGAAACTG ACA CAGTTTCACGCCC ATGGCGTATCCACTT Swoo_2687 3289035 - 3290888 + | surface antigen (D15) TERM 3282 3290983 - 3290963 - g 73 -6.2 -4.34444 | gap 1, overlap 3290964 TCAACAGAACACAAA GCAG-GAGT GTTA ACTCACTGC TGGCGAAGCTTTAAG TERM 3283 3291624 - 3291652 + G 77 -7.5 -4.44046 | GGGCCATGGCTCATC TACCGGAAGTG TTTATGC CAATTCCGGTA TTTGTTTCCGATGCC Swoo_2688 3290885 - 3294757 + | hypothetical protein TERM 3284 3294902 - 3294871 - T 72 -9.6 -2.88663 | opp_overlap 3294874 3294880, overlap 3294880 ATTTATGGCCAGACA TAAAAAAAACCGCT TAGA AGCGGTTTTTCTTT CAATCACTAATTGGG TERM 3285 3294874 - 3294899 + T 74 -9.1 -3.67564 | opp_overlap 3294871 3294880, overlap 3294880 TATGGCCAGACATAA AAAAAACCGCT TAGA AGCGGTTTTTC TTTCAATCACTAATT TERM 3286 3294893 - 3294880 - T 100 -8.1 -6.06529 | opp_overlap 3294880 3294874, overlap 3294871 CAGACATAAAAAAAA CCGCT TAGA AGCGG TTTTTCTTTCAATCA TERM 3287 3294880 - 3294893 + T 100 -8.1 -5.30616 | opp_overlap 3294871 3294880, overlap 3294874 CAGACATAAAAAAAA CCGCT TAGA AGCGG TTTTTCTTTCAATCA Swoo_2689 3295668 - 3294919 - | fatty acid metabolism transcriptional regulator FadR TERM 3288 3295909 - 3295892 - H 79 -9.9 -3.4582 | opp_overlap 3295880 3295891 3295890, overlap 3295890 GTAGGCTATTAAACA CTAGCCT CTTT AGGCTAG ACTTGTCCGGCTTAA TERM 3289 3297407 - 3297427 + G 70 -9.7 -2.85874 | overlap 3297400 3297392 CTATGGGCGTATGGT GTGGATGGC ACT GCCATACAC TATCGTACTCTCTAT Swoo_2690 3295980 - 3297566 + | Na+/H+ antiporter NhaB TERM 3290 3297617 - 3297645 + F 100 -13.3 -3.21912 | opp_overlap 3297624, overlap 3297624 CAGGTTAGAAAAGTC TTAAAAACGCCCT CAT AGGGCGTTTTTTA TTAATGAATTAGGGA TERM 3291 3297624 - 3297638 + F 100 -11.4 -5.5112 | opp_overlap 3297624, overlap 3297617 GAAAAGTCTTAAAAA CGCCCT CAT AGGGCG TTTTTTATTAATGAA TERM 3292 3297638 - 3297624 - f 100 -11.4 -4.66264 | opp_overlap 3297617 3297624 GAAAAGTCTTAAAAA CGCCCT CAT AGGGCG TTTTTTATTAATGAA Swoo_2691 3297671 - 3298180 + | disulphide bond formation protein DsbB TERM 3293 3298222 - 3298243 + T 79 -8.7 -4.1891 | opp_overlap 3298222 3298223 3298238, overlap 3298223 ATTAACAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3294 3298243 - 3298222 - T 79 -8.7 -4.09455 | opp_overlap 3298222 3298223, overlap 3298223 3298238 ATTAACAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3295 3298223 - 3298242 + T 87 -12.2 -3.11024 | opp_overlap 3298222 3298223 3298238, overlap 3298222 TTAACAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3296 3298242 - 3298223 - T 87 -12.2 -3.04589 | opp_overlap 3298223 3298222, overlap 3298222 3298238 TTAACAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3297 3298252 - 3298270 + T 80 -10.2 -3.60214 | opp_overlap 3298238, overlap 3298253 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTATCTACTTCAAAT TERM 3298 3298253 - 3298269 + T 93 -13.7 -2.75647 | opp_overlap 3298238, overlap 3298252 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTATCTACTTCAAA Swoo_2692 3298709 - 3298275 - | transposase IS200-family protein TERM 3299 3298793 - 3298812 + r 90 -12.2 -3.57263 | opp_overlap 3298793 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 3300 3298812 - 3298793 - R 90 -12.2 -3.44319 | opp_overlap 3298793 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 3301 3298828 - 3298853 + r 81 -10.5 -3.51924 | opp_overlap 3298834, overlap 3298834 TTTAGGGCTGAAAAT AAAAAACGCCC AATT GGGCGTTTTTA TTGTGTCGATAACGC TERM 3302 3298834 - 3298847 + r 100 -9.5 -5.24796 | opp_overlap 3298834, overlap 3298828 GCTGAAAATAAAAAA CGCCC AATT GGGCG TTTTTATTGTGTCGA TERM 3303 3298847 - 3298834 - R 100 -9.5 -5.79595 | opp_overlap 3298834 3298828 GCTGAAAATAAAAAA CGCCC AATT GGGCG TTTTTATTGTGTCGA Swoo_2693 3299639 - 3298887 - | hypothetical protein TERM 3304 3300087 - 3300077 - g 100 -6.8 -5.93809 | GCGGTAGAAAAAAAA GCTG CAC CAGC CGCGAAACCTAAAGC Swoo_2694 3299876 - 3300226 + | hypothetical protein TERM 3305 3300268 - 3300243 - T 79 -10.5 -3.33241 | opp_overlap 3300248, overlap 3300234 3300248 GAGTAATTAGAAAAC TAAAAGGAGCC TTTC GGCTCCTTTTT TATTGTTTACATCGC TERM 3306 3300248 - 3300263 + T 100 -10.4 -5.72254 | opp_overlap 3300243 3300248 ATTAGAAAACTAAAA GGAGCC TTTC GGCTCC TTTTTTATTGTTTAC TERM 3307 3300263 - 3300248 - T 91 -10.4 -4.74012 | opp_overlap 3300248, overlap 3300243 ATTAGAAAACTAAAA GGAGCC TTTC GGCTCC TTTTTTATTGTTTAC Swoo_2695 3300757 - 3300275 - | 17 kDa surface antigen TERM 3308 3300991 - 3301005 + G 76 -5.6 -4.82901 | TTCTTTGGTGGTCAC CGGATC CAA GAGCCG TTTTTGTACCCGGGA Swoo_2696 3300807 - 3301517 + | leucyltransferase TERM 3309 3301786 - 3301773 - g 79 -3.9 -5.22312 | ACGGACATTAAAAAA CAATA AAGA TATTG TCTGGAAAGTTATCG Swoo_2697 3301507 - 3302217 + | arginyltransferase Swoo_2698 3302355 - 3302573 + | translation initiation factor IF-1 TERM 3310 3302611 - 3302597 - T 73 -7 -4.18401 | opp_overlap 3302598, overlap 3302598 GTACAGATTTTAAAA GCCGGC TGT GCCGGT TTTTTTACTTTTTAA TERM 3311 3302610 - 3302598 - T 78 -10.5 -3.10558 | opp_overlap 3302598, overlap 3302597 TACAGATTTTAAAAG CCGGC TGT GCCGG TTTTTTTACTTTTTA TERM 3312 3302598 - 3302610 + T 100 -10.5 -5.85011 | opp_overlap 3302597 3302598 TACAGATTTTAAAAG CCGGC TGT GCCGG TTTTTTTACTTTTTA TERM 3313 3302670 - 3302639 - T 95 -13.2 -3.18869 | opp_overlap 3302639 3302647, overlap 3302647 TAATAAAGTATCGAA TTAAAAAAGGCTGC AATC GCAGCCTTTTTTTA TATCTAAAACTAAAT TERM 3314 3302639 - 3302670 + T 93 -13.2 -2.88663 | opp_overlap 3302639 3302647, overlap 3302647 TAATAAAGTATCGAA TTAAAAAAGGCTGC AATC GCAGCCTTTTTTTA TATCTAAAACTAAAT TERM 3315 3302662 - 3302647 - T 100 -10.4 -5.28481 | opp_overlap 3302639 3302647, overlap 3302639 TATCGAATTAAAAAA GGCTGC AATC GCAGCC TTTTTTTATATCTAA TERM 3316 3302647 - 3302662 + T 100 -10.4 -5.76633 | opp_overlap 3302647 3302639, overlap 3302639 TATCGAATTAAAAAA GGCTGC AATC GCAGCC TTTTTTTATATCTAA Swoo_2699 3304947 - 3302689 - | ATP-dependent Clp protease, ATP-binding subunit clpA Swoo_2700 3305292 - 3304984 - | ATP-dependent Clp protease adaptor protein ClpS TERM 3317 3305471 - 3305488 + H 76 -6.9 -4.22369 | opp_overlap 3305470, overlap 3305468 CATTCTGTTCAACAG GCGGTGA ATTG TCCCCGC TTATTTAGTTTTACT Swoo_2701 3305542 - 3305748 + | cold-shock DNA-binding domain-containing protein TERM 3318 3305792 - 3305775 - T 100 -12.7 -5.85011 | opp_overlap 3305775 TAAAAAGTAAAAAAA GGCAGGG TTTT CCCTGCC TTTTTTATTTCTCAC TERM 3319 3305775 - 3305792 + T 100 -12.7 -5.72622 | opp_overlap 3305775 TAAAAAGTAAAAAAA GGCAGGG TTTT CCCTGCC TTTTTTATTTCTCAC TERM 3320 3305851 - 3305828 - T 100 -15.4 -3.45386 | overlap 3305817 ATAGTTCACAATTAA TGCGAAGAGG GATC CCTCTTCGCA GTGACCAACTTATGC Swoo_2702 3308083 - 3305861 - | isocitrate dehydrogenase, NADP-dependent TERM 3321 3306919 - 3306909 - G 76 -5.4 -4.82901 | opp_overlap 3306895 3306909 TGCTCTTTACAAAAA GAGA TAG TCTC TTGATAAACACCCGC TERM 3322 3307150 - 3307168 + g 71 -9.6 -3.08813 | CAATCGCGGCTTTTT GCTCAGCT GGA AGTTGAGC TATCTTGGCGTAAAC TERM 3323 3308313 - 3308301 - H 72 -6.3 -4.37886 | overlap 3308268 3308267 CTATTCCCCACAAAA TAGAC ACA GTCTA AACCTTCATATCACG Swoo_2703 3308496 - 3309203 + | pseudouridine synthase Swoo_2704 3309217 - 3309693 + | NUDIX hydrolase TERM 3324 3310708 - 3310728 + G 72 -3.2 -4.91109 | gap 1, opp_overlap 3310708, overlap 3310691 3310708 TCAAGGTGGTAACCA CCC-TCGCC TTAT GTCGACGGG TTTTTATGCTGACCA Swoo_2705 3309839 - 3310972 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Swoo_2706 3310976 - 3311590 + | hypothetical protein TERM 3325 3312808 - 3312790 - g 70 -7.4 -3.89614 | CTGAACCTGTACAAA CCGTAATG CGC CGTTACGG CATCGAAAAGCCATA Swoo_2707 3311619 - 3312989 + | adenylosuccinate lyase TERM 3326 3313050 - 3313029 - f 93 -10.9 -4.88736 | opp_overlap 3313029 TAGTATCGATAAAAA GCGGTAAGC TAAC ACTTACCGC TTTTTTTATAGATAA TERM 3327 3313029 - 3313050 + F 100 -10.2 -5.64274 | opp_overlap 3313029 TAGTATCGATAAAAA GCGGTAAG CTAACA CTTACCGC TTTTTTTATAGATAA Swoo_2708 3313087 - 3314211 + | cupin 4 family protein TERM 3328 3314268 - 3314238 - T 95 -14.2 -2.8829 | opp_overlap 3314243, overlap 3314243 ATATGAGCATTAAAC TAAAATGGCACCTA TAT TAGGTGCCATTTTT ATCTGCTACTTGTTT TERM 3329 3314243 - 3314263 + T 100 -14.1 -5.01497 | opp_overlap 3314238 3314243 AGCATTAAACTAAAA TGGCACCTA TAT TAGGTGCCA TTTTTATCTGCTACT TERM 3330 3314263 - 3314243 - T 100 -14.1 -4.59376 | opp_overlap 3314243, overlap 3314238 AGCATTAAACTAAAA TGGCACCTA TAT TAGGTGCCA TTTTTATCTGCTACT Swoo_2709 3314750 - 3314307 - | hypothetical protein TERM 3331 3314407 - 3314421 + g 78 -8.6 -4.15106 | GGATCTTGAGTTGCC CCTGAT TTA ATCAGG TTTTCCGCCTTCATC TERM 3332 3314470 - 3314454 - G 80 -8.7 -4.22652 | CCACATCATCGAAAA GTGACGC AGC GCATCAC GAGCCGTTTCTGCAA TERM 3333 3315992 - 3316008 + G 78 -10.9 -3.13522 | opp_overlap 3315983, overlap 3315991 CAAGATCGCACCACG TCATCGG TTG CCGATGA TCTTGCTCGCGCCAT Swoo_2710 3315011 - 3316042 + | Glu/Leu/Phe/Val dehydrogenase dimerisation region TERM 3334 3316079 - 3316062 - f 70 -4.9 -4.59853 | TTAATTTTGTAAAAA TATGACC GAAT GATCATA AAACAACCAAGGGGT TERM 3335 3316090 - 3316113 + F 100 -8.2 -5.93809 | opp_overlap 3316083 3316090 TCATAAAACAACCAA GGGGTGGAAT ATCA ATTCTATCCC TTTTTTTTATGCCAA TERM 3336 3316404 - 3316386 - g 74 -10.4 -3.20633 | GGACAACACAGTGAA CATGAAGT TAA ACTTCATG ATGGAAATCCTTGTA Swoo_2711 3316254 - 3316598 + | hypothetical protein TERM 3337 3316625 - 3316603 - T 100 -9.9 -5.37593 | gap 1, opp_overlap 3316601 3316599 3316603 TGTTAAATTAAAAAA GGGCAGGACT ACCA AG-CCTGCCC TATCCTTTTTAGCCT TERM 3338 3316603 - 3316625 + T 76 -9.9 -3.18433 | gap 1, opp_overlap 3316603, overlap 3316601 3316599 TGTTAAATTAAAAAA GGGCAGGACT ACCA AG-CCTGCCC TATCCTTTTTAGCCT Swoo_2712 3317210 - 3316767 - | MarR family transcriptional regulator Swoo_2713 3317754 - 3317311 - | hypothetical protein Swoo_2714 3320878 - 3317807 - | FAD linked oxidase domain-containing protein TERM 3339 3319337 - 3319327 - G 73 -4.6 -4.77036 | opp_overlap 3319327 GCTCATCACCAAAAA CAGC AGG GCCG TATTCACCACGTACC TERM 3340 3320396 - 3320410 + g 77 -11.4 -2.56095 | opp_overlap 3320395 3320392, overlap 3320392 ATCGGTATTAACCAT GCCACC TAT GGTGGC TCGATTGGATGTAGA TERM 3341 3320931 - 3320956 + r 76 -10.5 -2.8237 | opp_overlap 3320936, overlap 3320936 ACAGTATAAACAAAA AAAAAGCCGCT CAAT AGCGGCTTTTG TGATTAGCTTATTCT TERM 3342 3320951 - 3320936 - R 100 -10.4 -6.5058 | opp_overlap 3320931 3320936 ATAAACAAAAAAAAA GCCGCT CAAT AGCGGC TTTTGTGATTAGCTT TERM 3343 3320936 - 3320951 + r 89 -10.4 -4.56093 | opp_overlap 3320936, overlap 3320931 ATAAACAAAAAAAAA GCCGCT CAAT AGCGGC TTTTGTGATTAGCTT Swoo_2715 3323354 - 3320985 - | phosphoenolpyruvate synthase Swoo_2716 3323481 - 3324293 + | hypothetical protein Swoo_2717 3324808 - 3325872 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3344 3325929 - 3325904 - T 100 -11.9 -5.1287 | opp_overlap 3325904 TTTATATTTAAAAAA GGCTTCCCAGT GTCA ACTGTGAAGCC TTTTTCTATACCATT TERM 3345 3325904 - 3325929 + T 100 -11.9 -4.98522 | opp_overlap 3325904 TTTATATTTAAAAAA GGCTTCCCAGT GTCA ACTGTGAAGCC TTTTTCTATACCATT Swoo_2718 3327177 - 3325960 - | chitin-binding domain-containing protein Swoo_2719 3330671 - 3327282 - | glycoside hydrolase family protein Swoo_2720 3331081 - 3331509 + | thioesterase superfamily protein TERM 3346 3331515 - 3331535 + F 70 -9 -3.16835 | opp_overlap 3331514 3331515 CAATTTATAATAAAC CGCAGTTG CTAAA CGACTGCG TACTTTGTCTTTATC TERM 3347 3331555 - 3331578 + F 100 -11.1 -5.2189 | opp_overlap 3331561 TTGTCTTTATCTGGT CAACCACCA CACTTT TGGTGGTTG TTTTTTAGTCATTAA Swoo_2721 3331730 - 3332389 + | two component LuxR family transcriptional regulator TERM 3348 3332411 - 3332440 + T 100 -16.7 -3.66178 | opp_overlap 3332417, overlap 3332417 AACACCAGTTTCCAT TAAAAAGCCGATC ATCT GATCGGCTTTTTA TTTCAAGTTAACGGA TERM 3349 3332417 - 3332434 + T 100 -11.3 -5.29846 | opp_overlap 3332417, overlap 3332411 AGTTTCCATTAAAAA GCCGATC ATCT GATCGGC TTTTTATTTCAAGTT TERM 3350 3332434 - 3332417 - T 91 -11.3 -4.7254 | opp_overlap 3332417 3332411 AGTTTCCATTAAAAA GCCGATC ATCT GATCGGC TTTTTATTTCAAGTT Swoo_2722 3333737 - 3332448 - | FAD dependent oxidoreductase Swoo_2723 3334586 - 3333975 - | fumarylacetoacetate (FAA) hydrolase Swoo_2724 3338041 - 3334619 - | integral membrane sensor hybrid histidine kinase TERM 3351 3337744 - 3337734 - G 74 -6.8 -4.42386 | CGCGCAGCGATAAAA TCCG CAA CGGA GGTGATGTTATGGGC TERM 3352 3338980 - 3338992 + G 85 -9.1 -4.33274 | overlap 3338982 GCTGAGGAGATGGGC GCGGA AGA TCCGC TTTTCCTACTCTACA Swoo_2725 3338218 - 3340170 + | acetate--CoA ligase TERM 3353 3340204 - 3340221 + F 100 -12.7 -6.09888 | TTAAGACTCTCCCTA GCCCCTC TAAC GAGGGGC TTTTTTTTCTTCACC Swoo_2726 3340292 - 3342034 + | type III restriction protein res subunit Swoo_2727 3342097 - 3342366 + | GrxA family glutaredoxin TERM 3354 3342424 - 3342387 - T 100 -23.1 -3.60792 | opp_overlap 3342391 3342398, overlap 3342398 CTGTTAATCTGCAAA GCAATAAAAAAGGAGGC TAAC GCCTCCTTTTTTATTGC TTCAGCTCACTCAAA TERM 3355 3342391 - 3342420 + T 100 -16.7 -3.35992 | opp_overlap 3342387 3342398, overlap 3342398 TAATCTGCAAAGCAA TAAAAAAGGAGGC TAAC GCCTCCTTTTTTA TTGCTTCAGCTCACT TERM 3356 3342413 - 3342398 - T 100 -10.4 -5.59655 | opp_overlap 3342398 3342391, overlap 3342387 CAAAGCAATAAAAAA GGAGGC TAAC GCCTCC TTTTTTATTGCTTCA TERM 3357 3342398 - 3342413 + T 100 -10.4 -5.5604 | opp_overlap 3342387 3342398, overlap 3342391 CAAAGCAATAAAAAA GGAGGC TAAC GCCTCC TTTTTTATTGCTTCA Swoo_2728 3343598 - 3342459 - | porin TERM 3358 3345721 - 3345749 + r 73 -8.3 -3.61103 | opp_overlap 3345728, overlap 3345722 3345728 TTCTTGCTGTTTGAA TGAAAAACAGACT AGG AGTATGTTTTTCG TTTCAAATCAGATTA TERM 3359 3345722 - 3345748 + r 72 -9.6 -2.7634 | opp_overlap 3345728, overlap 3345721 3345728 TCTTGCTGTTTGAAT GAAAAACAGACT AGG AGTATGTTTTTC GTTTCAAATCAGATT Swoo_2729 3346493 - 3345762 - | tol-pal system protein YbgF TERM 3360 3346464 - 3346482 + g 73 -4.5 -4.77438 | opp_overlap 3346463 3346464 GATACTGAGAAGAAT TGCCGCA CTCAA TACGGCA TTTTTCATCATCAAT Swoo_2730 3347062 - 3346526 - | peptidoglycan-associated lipoprotein Swoo_2731 3348426 - 3347098 - | beta-propeller repeat-containing to-pal system protein TolB Swoo_2732 3349367 - 3348438 - | protein TolA TERM 3361 3349259 - 3349271 + g 71 -4.1 -4.83615 | GGGCACTGGCTTGAA CCTGA GGC TTAGG TTTTTCTGAAAAGTC Swoo_2733 3349814 - 3349377 - | protein TolR TERM 3362 3349619 - 3349631 + g 79 -9.1 -3.88498 | opp_overlap 3349617 CAGCATCAATAGACG CCACC ACT GGTGG TTTACTGTCTGCGGC Swoo_2734 3350503 - 3349814 - | protein TolQ Swoo_2735 3350891 - 3350493 - | tol-pal system-associated acyl-CoA thioesterase TERM 3363 3351029 - 3351012 - R 100 -12.7 -5.24129 | opp_overlap 3351014 TTTGTTCATAAAAAA GAGGCGC TAAT GCGCCTC TCTACAATCAATTAA TERM 3364 3351014 - 3351027 + r 73 -9.5 -2.9006 | opp_overlap 3351012 TGTTCATAAAAAAGA GGCGC TAAT GCGCC TCTCTACAATCAATT Swoo_2736 3353205 - 3351061 - | prolyl oligopeptidase TERM 3365 3353105 - 3353115 + g 72 -6.8 -4.26792 | opp_overlap 3353105, overlap 3353097 GCCAACGCTACAGAA GAGG AGT CCTC TTTTACAGTTTGTGT TERM 3366 3353423 - 3353406 - R 70 -2.7 -5.11613 | overlap 3353408 3353419 ACATTATGCAAAAAA TCTGCTT ACTC AAGCACA AAGAGCCACTACAAG TERM 3367 3353679 - 3353702 + r 100 -15.4 -5.72616 | AATTTATTTTTTGCG GCCCGCTTAA GGAA TTAAGCGGGC TTTTTTTATCTAAAT TERM 3368 3353747 - 3353768 + r 79 -8.7 -4.1891 | opp_overlap 3353747 3353748 3353763, overlap 3353748 TTTTCCAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3369 3353768 - 3353747 - R 79 -8.7 -4.00042 | opp_overlap 3353747 3353748, overlap 3353748 3353763 TTTTCCAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3370 3353748 - 3353767 + r 87 -12.2 -3.11024 | opp_overlap 3353747 3353748 3353763, overlap 3353747 TTTCCAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3371 3353767 - 3353748 - R 87 -12.2 -2.99704 | opp_overlap 3353748 3353747, overlap 3353747 3353763 TTTCCAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3372 3353777 - 3353795 + r 80 -10.2 -3.60214 | opp_overlap 3353763, overlap 3353778 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTATCTACTTCAAAT TERM 3373 3353778 - 3353794 + r 93 -13.7 -2.75647 | opp_overlap 3353763, overlap 3353777 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTATCTACTTCAAA Swoo_2737 3354234 - 3353800 - | transposase IS200-family protein TERM 3374 3354337 - 3354318 - R 90 -12.2 -3.44319 | opp_overlap 3354318 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 3375 3354318 - 3354337 + r 90 -12.2 -3.57144 | opp_overlap 3354318 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 3376 3354377 - 3354358 - R 100 -7.8 -5.45802 | GGCTGAAAACAAAAA GCCCCACA TAAA TGCAGGGC TCATCGACACTTAGC Swoo_2738 3355278 - 3354409 - | OmpA/MotB domain-containing protein Swoo_2739 3355414 - 3356082 + | ribonuclease T TERM 3377 3356128 - 3356153 + T 85 -10.6 -4.1413 | opp_overlap 3356107 3356122 TAGACAAAGTCTTAA TGTGGCAAAA AACCTC TTTTGCCACA TTTTCAAACTATATT Swoo_2740 3357180 - 3356167 - | hypothetical protein TERM 3378 3357016 - 3357006 - G 100 -2.4 -5.96521 | ATGAAGCAAAAAAAA TGGC CAT GCCT AAATAGGTCAGAGGT TERM 3379 3357264 - 3357248 - R 100 -9.4 -5.7827 | opp_overlap 3357248 AACAGAAACAAAAAA GCTGCG ATAAA CGCAGC TTTTAGTGATCACAG TERM 3380 3357248 - 3357264 + r 85 -9.4 -4.30576 | opp_overlap 3357248 AACAGAAACAAAAAA GCTGCG ATAAA CGCAGC TTTTAGTGATCACAG Swoo_2741 3357901 - 3357296 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 3381 3357645 - 3357633 - G 70 -9.1 -3.13403 | opp_overlap 3357619 3357632 3357630, overlap 3357631 CCGCCTTCAGCAACA GGCGT GTT ACGCC ATGCATTGTGAGTGA TERM 3382 3358782 - 3358766 - g 72 -8.7 -3.63694 | overlap 3358749 3358745 ACCTACTCGCAATAA GAGAGCA AGT TGCTCCC GCGATGATGATCCCC Swoo_2742 3358204 - 3359523 + | Na+/H+ antiporter NhaC TERM 3383 3359576 - 3359547 - T 87 -12.3 -3.05832 | opp_overlap 3359547 3359554, overlap 3359554 CCTAAAAATAGGACA CAAAAAAGGAGCC AATT GGCTCCTTTTTTC TCGTTAAAAATAACG TERM 3384 3359547 - 3359576 + T 85 -12.3 -2.72344 | opp_overlap 3359547 3359554, overlap 3359554 CCTAAAAATAGGACA CAAAAAAGGAGCC AATT GGCTCCTTTTTTC TCGTTAAAAATAACG TERM 3385 3359554 - 3359569 + T 100 -10.4 -5.37345 | opp_overlap 3359554 3359547, overlap 3359547 ATAGGACACAAAAAA GGAGCC AATT GGCTCC TTTTTTCTCGTTAAA TERM 3386 3359569 - 3359554 - T 100 -10.4 -5.40625 | opp_overlap 3359547 3359554, overlap 3359547 ATAGGACACAAAAAA GGAGCC AATT GGCTCC TTTTTTCTCGTTAAA Swoo_2743 3360219 - 3359593 - | uracil phosphoribosyltransferase Swoo_2744 3360433 - 3361470 + | phosphoribosylformylglycinamidine cyclo-ligase Swoo_2745 3361470 - 3362114 + | phosphoribosylglycinamide formyltransferase TERM 3387 3362152 - 3362173 + F 100 -13.1 -5.1963 | opp_overlap 3362152 CTTTTGAATAAAAAA GGCTAAGAG GGAA CTCTTAGCC TTTTTATTGCTTCCA TERM 3388 3362173 - 3362152 - f 100 -13.1 -5.4505 | opp_overlap 3362152 CTTTTGAATAAAAAA GGCTAAGAG GGAA CTCTTAGCC TTTTTATTGCTTCCA Swoo_2746 3362333 - 3363079 + | HAD family hydrolase TERM 3389 3363132 - 3363155 + F 100 -14 -3.82098 | opp_overlap 3363128 3363127 CTCAATTAAACCTTC TGACCCACTT GTCA AAGTGGGTCA TTTGCATTCATTATG TERM 3390 3363799 - 3363789 - g 70 -6.8 -4.07568 | opp_overlap 3363788 CCTGGCTTTGCAAAA CCTG CAT CAGG ACTGTTTAACGGTAA TERM 3391 3363957 - 3363940 - g 75 -9.1 -3.63744 | overlap 3363938 CCGTGGTCGAAAATA GCTGGAC AGGT GCCCAGC AAGACTTAGTTCAAA Swoo_2747 3363255 - 3364925 + | peptidase M28 TERM 3392 3365016 - 3364992 - T 100 -12.9 -4.46155 | GATATATCCATAAAA GTGCCAGGAGA GAT TCTCTTGGCAC TCCACTATCAGTCAG Swoo_2748 3366998 - 3365043 - | diguanylate cyclase TERM 3393 3366924 - 3366913 - G 76 -5.8 -4.78753 | opp_overlap 3366912 GCAATATTAACAAAA GGAG TAAA CTCC GTACTTTGAGCTATC TERM 3394 3368349 - 3368321 - g 71 -5.2 -4.46926 | TATCGCAGCACAAAA GGTAGCCGATGC AATAG GCACCATCCACC ATGAGATCACTTTTA Swoo_2749 3367455 - 3369128 + | asparagine synthase (glutamine-hydrolyzing) TERM 3395 3369147 - 3369187 + T 70 -7 -3.77832 | gap 1, opp_overlap 3369147, overlap 3369144 ATCACTCAATAATAA GCAGTGATGATCTTAATCC TAGA GGGCTA-GATTATCGCTGC TTGTTGAGTTTAAGA Swoo_2750 3371132 - 3369219 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Swoo_2751 3371683 - 3371135 - | heme NO binding domain-containing protein TERM 3396 3371399 - 3371381 - G 70 -6 -4.29106 | CTCCACATGAATAAA GCTGTCTA TTT TAGAAAGC AGATCGAAAGAGTCT TERM 3397 3372112 - 3372091 - R 79 -8.7 -4.14807 | opp_overlap 3372091 3372092, overlap 3372092 3372107 AAGATAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3398 3372091 - 3372112 + r 79 -8.7 -4.1891 | opp_overlap 3372091 3372092 3372107, overlap 3372092 AAGATAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3399 3372111 - 3372092 - R 87 -12.2 -3.07257 | opp_overlap 3372092 3372091, overlap 3372091 3372107 AGATAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3400 3372092 - 3372111 + r 87 -12.2 -3.11024 | opp_overlap 3372091 3372092 3372107, overlap 3372091 AGATAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3401 3372121 - 3372139 + r 80 -10.2 -3.60214 | opp_overlap 3372107, overlap 3372122 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTATCTACTTCAAAT TERM 3402 3372122 - 3372138 + r 93 -13.7 -2.75647 | opp_overlap 3372107, overlap 3372121 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTATCTACTTCAAA Swoo_2752 3372578 - 3372144 - | transposase IS200-family protein TERM 3403 3372662 - 3372681 + r 90 -12.2 -3.57144 | opp_overlap 3372662 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 3404 3372681 - 3372662 - R 90 -12.2 -3.44319 | opp_overlap 3372662 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 3405 3372723 - 3372696 - R 75 -7.8 -4.09685 | opp_overlap 3372703, overlap 3372703 3372706 GTTTAGGGCTGAAAA CAAAAAAGGAGC CTAT ACTCCTTTTTAG GCACTTAACATTAAA TERM 3406 3372716 - 3372703 - R 90 -4.5 -5.79595 | opp_overlap 3372703, overlap 3372696 3372706 GCTGAAAACAAAAAA GGAGC CTAT ACTCC TTTTTAGGCACTTAA Swoo_2753 3373438 - 3372734 - | hypothetical protein Swoo_2754 3373925 - 3373545 - | GCN5-related N-acetyltransferase Swoo_2755 3374282 - 3374668 + | glyoxalase/bleomycin resistance protein/dioxygenase Swoo_2756 3375697 - 3374678 - | ferredoxin TERM 3407 3375894 - 3375868 - g 79 -3.8 -5.22039 | overlap 3375869 GCTAAACCCAAAAAA GCGATAAATTTA AAA CAAATCTATCGT CAACTCCCCCGTTAC TERM 3408 3377106 - 3377086 - g 76 -8.3 -4.00066 | overlap 3377087 GCGATAATTGACAAA GTCGAACTC AAA GAGTTCGAT ATCAAGGTAACAGAA TERM 3409 3377105 - 3377087 - g 81 -11.8 -2.99558 | overlap 3377086 CGATAATTGACAAAG TCGAACTC AAA GAGTTCGA TATCAAGGTAACAGA TERM 3410 3378065 - 3378055 - g 74 -6.8 -4.3767 | TTAGAGGAGAACAAA CTGC AAG GCAG CAACCATATGGTGGT TERM 3411 3378208 - 3378227 + G 72 -8.6 -3.67141 | overlap 3378198 GATGTCTCAGGCGAT CTGGACTC GCCA GAGTTCAG TTTCGGTGGCATTAT Swoo_2757 3375847 - 3378921 + | hypothetical protein TERM 3412 3378955 - 3379002 + F 89 -10 -4.51994 | gap 1 TTAATCTTAAGCTTG CATGGGTTACACTCTGGCCGATT TCG ATTCTATCAGAG-GTAACCCATG TTTATTGTTCGTTGG Swoo_2758 3379000 - 3379356 + | glutaredoxin TERM 3413 3379368 - 3379395 + T 86 -8.5 -4.63527 | opp_overlap 3379373, overlap 3379373 GTAATAGACAAAACT AAAAAGCGACC CATACA GGTCGCTTTTG TTTTTAAGCTAATAA TERM 3414 3379390 - 3379373 - T 91 -9.1 -5.15526 | opp_overlap 3379373 3379368 AGACAAAACTAAAAA GCGACCC ATAC AGGTCGC TTTTGTTTTTAAGCT TERM 3415 3379373 - 3379390 + T 100 -8.4 -5.27023 | opp_overlap 3379373, overlap 3379368 AGACAAAACTAAAAA GCGACC CATACA GGTCGC TTTTGTTTTTAAGCT Swoo_2759 3379817 - 3379413 - | signal-transduction protein Swoo_2760 3380164 - 3379814 - | putative nitrogen regulatory protein P-II Swoo_2761 3381036 - 3380245 - | hypothetical protein Swoo_2762 3381770 - 3381036 - | hypothetical protein Swoo_2763 3382093 - 3382617 + | putative lipoprotein TERM 3416 3382678 - 3382667 - f 70 -5.8 -4.31085 | opp_overlap 3382667, overlap 3382668 CAGATTAAGTTAAAA TCCG CTCC CGGA TTTACAATCCAGCCA Swoo_2764 3382741 - 3382971 + | hypothetical protein TERM 3417 3382994 - 3383013 + T 86 -7.8 -4.89852 | opp_overlap 3382995, overlap 3382995 CATTACAAATAAAAA AGGGAGCT TAGT AGCTCCCA TTTTTATGCGTGTCA TERM 3418 3383012 - 3382995 - T 100 -11.3 -5.73978 | opp_overlap 3382994 3382995 ATTACAAATAAAAAA GGGAGCT TAGT AGCTCCC ATTTTTATGCGTGTC TERM 3419 3382995 - 3383012 + T 83 -11.3 -3.53188 | opp_overlap 3382995, overlap 3382994 ATTACAAATAAAAAA GGGAGCT TAGT AGCTCCC ATTTTTATGCGTGTC Swoo_2765 3384548 - 3383037 - | MATE efflux family protein TERM 3420 3383299 - 3383285 - G 72 -7.2 -4.14472 | CTAATATTGCGAAAA TTATCG CCC CGATAA CTTGCCCCACCAACA Swoo_2766 3385423 - 3384584 - | Ion transport protein TERM 3421 3385940 - 3385919 - g 77 -10.1 -3.45737 | overlap 3385910 3385933 CAATGATGAGGATAA GCTCAGAGC CAAA GCTCTGGGC ATTAGCCCTGGGGGA Swoo_2767 3385575 - 3386114 + | ErfK/YbiS/YcfS/YnhG family protein Swoo_2768 3386183 - 3386755 + | hypothetical protein TERM 3422 3386804 - 3386772 - T 100 -15.7 -3.02471 | opp_overlap 3386779, overlap 3386779 CTCGGAGTAGAGACA CAAAAAAGGTGAGCC AAC GGCTCACCTTTATCG ACAGTTCAACACTGA TERM 3423 3386797 - 3386779 - T 100 -14.6 -5.4492 | opp_overlap 3386779, overlap 3386772 TAGAGACACAAAAAA GGTGAGCC AAC GGCTCACC TTTATCGACAGTTCA TERM 3424 3386779 - 3386797 + T 100 -14.6 -3.87869 | opp_overlap 3386779 3386772 TAGAGACACAAAAAA GGTGAGCC AAC GGCTCACC TTTATCGACAGTTCA Swoo_2769 3387357 - 3386821 - | hypothetical protein Swoo_2770 3387863 - 3387354 - | hypothetical protein Swoo_2771 3388375 - 3387863 - | hypothetical protein Swoo_2772 3389615 - 3388353 - | cyclopropane-fatty-acyl-phospholipid synthase Swoo_2773 3390375 - 3389656 - | hypothetical protein Swoo_2774 3391625 - 3390372 - | amine oxidase Swoo_2775 3392348 - 3391632 - | short-chain dehydrogenase/reductase SDR Swoo_2776 3392776 - 3392345 - | hypothetical protein Swoo_2777 3394213 - 3392804 - | deoxyribodipyrimidine photo-lyase TERM 3425 3393282 - 3393294 + g 79 -6.9 -4.7329 | AACTCTGCTTGCGTA CCCGG CCA CTGGG TTTTTGCATACTTTT Swoo_2778 3395157 - 3394213 - | hypothetical protein Swoo_2779 3395910 - 3395170 - | anti-ECFsigma factor, ChrR Swoo_2780 3396553 - 3395903 - | ECF subfamily RNA polymerase sigma-24 factor Swoo_2781 3397212 - 3396589 - | hypothetical protein Swoo_2782 3397876 - 3398187 + | hypothetical protein Swoo_2783 3399206 - 3398346 - | peptidase M23B Swoo_2784 3400116 - 3399235 - | hypothetical protein TERM 3426 3399464 - 3399449 - G 77 -7.6 -4.36595 | opp_overlap 3399463, overlap 3399442 TAGTGAAAGCCAAAA TGAGTG TCAT CACTCA CCTTCGCCTGAGGTG TERM 3427 3400330 - 3400343 + r 88 -9.5 -4.57073 | opp_overlap 3400330 CTAAGTACAAAAAAA GCGCC AAAC GGCGC TTTTTCAAACCAGTA TERM 3428 3400343 - 3400330 - R 100 -9.5 -5.71983 | opp_overlap 3400330 CTAAGTACAAAAAAA GCGCC AAAC GGCGC TTTTTCAAACCAGTA Swoo_2785 3401395 - 3400364 - | 37kDa nucleoid-associated protein Swoo_2786 3401775 - 3401990 + | hypothetical protein Swoo_2787 3402075 - 3403862 + | sulfatase TERM 3429 3404380 - 3404352 - f 70 -8.1 -3.28712 | TTGTCTGGGGGACAA GAGATCGCAGGTT CAA ATCCTGCTATCCC GACCAAATATTGAAA TERM 3430 3404420 - 3404397 - f 88 -11 -4.32903 | opp_overlap 3404397 ACCAAATATTGAAAA GCCGCTAATC GAAA GATTGGCGGC TTTTTGCTATAAATG TERM 3431 3404397 - 3404420 + F 100 -13.2 -4.81551 | opp_overlap 3404397 ACCAAATATTGAAAA GCCGCTAATC GAAA GATTGGCGGC TTTTTGCTATAAATG TERM 3432 3404919 - 3404933 + G 73 -5 -4.64334 | TGGGCAACCTTTTTT TTGTGA TTG TCGCAA TTTTATTAGGGCCTT Swoo_2788 3404795 - 3406975 + | diguanylate cyclase Swoo_2789 3408438 - 3406972 - | hypothetical protein Swoo_2790 3408550 - 3409056 + | hypothetical protein TERM 3433 3409098 - 3409085 - T 90 -9.5 -4.75372 | opp_overlap 3409085, overlap 3409071 AGCACCCATTAAAAA GGCGC TTTC GCGCC TTATATACCCAAGCC TERM 3434 3409085 - 3409098 + T 77 -9.5 -3.48276 | opp_overlap 3409071 3409085 AGCACCCATTAAAAA GGCGC TTTC GCGCC TTATATACCCAAGCC Swoo_2791 3410002 - 3409172 - | NAD+ synthetase TERM 3435 3410170 - 3410191 + r 79 -8.7 -4.1891 | opp_overlap 3410170 3410171 3410186, overlap 3410171 GAAGCAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3436 3410191 - 3410170 - R 79 -8.7 -4.12043 | opp_overlap 3410170 3410171, overlap 3410171 3410186 GAAGCAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 3437 3410190 - 3410171 - R 87 -12.2 -3.06141 | opp_overlap 3410171 3410170, overlap 3410170 3410186 AAGCAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3438 3410171 - 3410190 + r 87 -12.2 -3.11024 | opp_overlap 3410170 3410171 3410186, overlap 3410170 AAGCAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 3439 3410200 - 3410218 + r 80 -10.2 -3.60214 | opp_overlap 3410186, overlap 3410201 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTGTCTACTTCAAAT TERM 3440 3410201 - 3410217 + r 93 -13.7 -2.75647 | opp_overlap 3410186, overlap 3410200 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTGTCTACTTCAAA TERM 3441 3410760 - 3410741 - R 90 -12.2 -3.44319 | opp_overlap 3410741 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 3442 3410741 - 3410760 + r 90 -12.2 -3.57263 | opp_overlap 3410741 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 3443 3410805 - 3410775 - R 100 -13.5 -4.09685 | opp_overlap 3410770 3410780, overlap 3410780 GTTTAGGGCTGAAAA TAAAATGCCAGCA ATCAA TGCTGGCATTCTA CTCACTTTCAACAAA TERM 3444 3410800 - 3410780 - R 93 -11.2 -5.07652 | opp_overlap 3410770 3410780, overlap 3410775 GGGCTGAAAATAAAA TGCCAGCA ATCAA TGCTGGCA TTCTACTCACTTTCA TERM 3445 3410780 - 3410800 + r 83 -11.2 -3.45776 | opp_overlap 3410780 3410775, overlap 3410770 GGGCTGAAAATAAAA TGCCAGCA ATCAA TGCTGGCA TTCTACTCACTTTCA Swoo_2793 3411943 - 3410891 - | porin Swoo_2794 3414129 - 3411976 - | methyl-accepting chemotaxis sensory transducer TERM 3446 3413945 - 3413961 + g 74 -9.5 -3.29947 | ATATCAACAGCAGCC GCTTCAA TTT TTGAAGC TTGGTCTAATACATC TERM 3447 3414276 - 3414291 + H 100 -6.2 -5.68039 | AGTATTGTCTGGAAT TTCATC TATA GATGAA TTTTTTTATACCTTT TERM 3448 3415261 - 3415273 + G 76 -4.1 -5.08824 | CTCTATCCGATATCG CCAAT CAA GTTGG TTTTTTCGATCAAAG Swoo_2795 3414531 - 3415358 + | AraC family transcriptional regulator Swoo_2796 3415500 - 3416144 + | lysine exporter protein LysE/YggA TERM 3449 3416186 - 3416168 - T 70 -8.2 -3.24166 | overlap 3416172 ACTCAACTAATGCAA CTAATGCT GTG AGCATCAG ACTAGAGCACAGTAA Swoo_2797 3417572 - 3416220 - | two component, sigma54 specific, Fis family transcriptional regulator Swoo_2798 3419182 - 3417572 - | integral membrane sensor signal transduction histidine kinase TERM 3450 3419310 - 3419298 - H 76 -4.8 -5.07486 | TATTTTTAACAAAAA TCCC CAAAT GGGA AAACTTATTACTGAT Swoo_2799 3419507 - 3420232 + | hypothetical protein TERM 3451 3420634 - 3420654 + G 72 -8.3 -3.61398 | TATTTACCCTTTTAG CATCACTGT GCT GCAGTGGTG TTATTGCAAAACGCA Swoo_2800 3420348 - 3420686 + | hypothetical protein TERM 3452 3420731 - 3420698 - T 70 -9 -3.15574 | opp_overlap 3420698, overlap 3420696 TTAACCCCATCAATA CCGGTATCACTCAT CACAGT ATGAGTGATATCGA GTTACCTCTTCTACC TERM 3453 3420698 - 3420732 + T 72 -8.8 -3.21993 | gap 1, opp_overlap 3420698 3420696 TTAACCCCATCAATA C-CGGTATCACTCAT CACAGT ATGAGTGATATCGAG TTACCTCTTCTACCT Swoo_2801 3422247 - 3420742 - | binding-protein-dependent transport systems inner membrane component Swoo_2802 3422917 - 3422240 - | ABC transporter related TERM 3454 3422860 - 3422876 + g 75 -9.4 -3.54012 | opp_overlap 3422860 CTATAGACAAAGAAA GCTGGC GAATA GCCAGC TTGTCTGCATACTTT TERM 3455 3422876 - 3422860 - G 91 -9.4 -4.65722 | opp_overlap 3422860 CTATAGACAAAGAAA GCTGGC GAATA GCCAGC TTGTCTGCATACTTT Swoo_2803 3423775 - 3422921 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein Swoo_2804 3424013 - 3424687 + | two component transcriptional regulator Swoo_2805 3424678 - 3426027 + | integral membrane sensor signal transduction histidine kinase TERM 3456 3426035 - 3426070 + T 100 -17.9 -3.0094 | opp_overlap 3426040, overlap 3426040 CGATCTAATTGATCA GTAAAGGCTTTAACC AAATAA GGTTAAAGCCTTTAC TCTATATCACTGAGC TERM 3457 3426040 - 3426065 + T 95 -12 -3.91196 | opp_overlap 3426040, overlap 3426035 TAATTGATCAGTAAA GGCTTTAACC AAATAA GGTTAAAGCC TTTACTCTATATCAC TERM 3458 3426065 - 3426040 - T 90 -12 -3.80461 | opp_overlap 3426040 3426035 TAATTGATCAGTAAA GGCTTTAACC AAATAA GGTTAAAGCC TTTACTCTATATCAC Swoo_2806 3426788 - 3426096 - | 2OG-Fe(II) oxygenase Swoo_2807 3426941 - 3428200 + | metal dependent phosphohydrolase Swoo_2808 3428308 - 3428622 + | hypothetical protein Swoo_2809 3429580 - 3428633 - | magnesium and cobalt transport protein CorA Swoo_2810 3430065 - 3429700 - | hypothetical protein TERM 3459 3430112 - 3430087 - H 78 -3.3 -5.47159 | overlap 3430089 CTCCAAGAGAAAAAA CAGATAAGAAG TATA CCCCCTATCTA ATGATAAAACTGTTA Swoo_2811 3430304 - 3430984 + | hypothetical protein TERM 3460 3431046 - 3431011 - f 72 -7.7 -3.72141 | opp_overlap 3431011 3431009 ATACCCATATGTAAA CACTAGATGCTCACT TATCCT AGTTATCATCTAGTG TCTTTCCCTACAATT Swoo_2812 3431208 - 3432239 + | patatin Swoo_2813 3432462 - 3433223 + | hypothetical protein Swoo_2814 3433487 - 3435595 + | methyl-accepting chemotaxis sensory transducer TERM 3461 3435761 - 3435726 - T 100 -9.2 -5.4251 | gap 1, opp_overlap 3435726 TTCAGATACAAAAAA GCCCTAAC-ACTCTT TGTTTAT AAGAGTTGCTAGGGC TTATCGTAATGTTAG TERM 3462 3435869 - 3435915 + T 85 -10.5 -4.1891 | gap 2, opp_overlap 3435875, overlap 3435875 CCGCAACGCCATAAC GA-AAAAGCCTCTGCA-TTCTTG TAA TAAGAAGTGCAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 3463 3435908 - 3435875 - T 100 -13.4 -4.93365 | gap 1, opp_overlap 3435869 3435875 CGCCATAACGAAAAA GCCTCTGCA-TTCTT GTAAT AAGAAGTGCAGAGGC TTTCGTCTTTGTGTT TERM 3464 3435875 - 3435908 + T 100 -14.1 -4.07089 | gap 1, opp_overlap 3435875, overlap 3435869 CGCCATAACGAAAAA GCCTCTGCA-TTCTTG TAA TAAGAAGTGCAGAGGC TTTCGTCTTTGTGTT TERM 3465 3436140 - 3436161 + T 100 -13.1 -3.47307 | opp_overlap 3436140 AACAGACACGAAAAA GCCCTAACA TTGC TGTTAGGGC TTATCGTAATGTTGG TERM 3466 3436161 - 3436140 - T 100 -13.1 -4.87037 | opp_overlap 3436140 AACAGACACGAAAAA GCCCTAACA TTGC TGTTAGGGC TTATCGTAATGTTGG TERM 3467 3437868 - 3437879 + T 71 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 3468 3438374 - 3438390 + T 75 -8 -4.08546 | overlap 3438363 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 3469 3439172 - 3439184 + T 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 3470 3440010 - 3440042 + T 73 -9.3 -3.0094 | opp_overlap 3440011, overlap 3440017 GAGCGGGCTTAAAAA AGCCAAAGATAAAGT CTT AGTTTATCTTTGGCA TCTCTATCCATGAGC TERM 3471 3440041 - 3440011 - T 100 -12.8 -5.00884 | opp_overlap 3440010 3440017 AGCGGGCTTAAAAAA GCCAAAGATAAAGT CTT AGTTTATCTTTGGC ATCTCTATCCATGAG TERM 3472 3440287 - 3440269 - T 76 -7.4 -4.28656 | overlap 3440255 3440272 AGCCAAGACTTAAAA GATTTGGC GAA GCCAATTC GAGTGAGACAAGGCT TERM 3473 3440494 - 3440511 + T 74 -9.9 -2.79842 | overlap 3440491 TCATCGTTCAGTCGT CGTGTAG TAAA CTACACG TCCTTCCTCACTCTT TERM 3474 3440657 - 3440676 + T 71 -9.2 -2.65808 | opp_overlap 3440645 3440648, overlap 3440654 TAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 3475 3442836 - 3442816 - T 100 -8.3 -5.5353 | opp_overlap 3442816 TACAGCAACAAAAAA GCACCAAGT GTT AATTGGTGC TTTAAATAAGGTAAG TERM 3476 3442816 - 3442836 + T 73 -8.3 -3.65902 | opp_overlap 3442816 TACAGCAACAAAAAA GCACCAAGT GTT AATTGGTGC TTTAAATAAGGTAAG Swoo_2815 3443426 - 3442875 - | D,D-heptose 1,7-bisphosphate phosphatase Swoo_2816 3443621 - 3444946 + | peptidase M24 TERM 3477 3444996 - 3444985 - T 81 -4.4 -5.42198 | opp_overlap 3444985 GCTCAAAAAACAAAA GACA TGGC TGTC CTATCTTTTCCTTCG Swoo_2817 3445448 - 3445095 - | hypothetical protein Swoo_2818 3445984 - 3445526 - | hypothetical protein TERM 3478 3446041 - 3446051 + r 70 -8.2 -3.34398 | overlap 3446039 TGAGTCCAGAGTGTA CCCC GAA GGGG TGTTTACGCGCGAAG Swoo_2819 3446376 - 3446068 - | GCN5-related N-acetyltransferase TERM 3479 3446795 - 3446764 - R 89 -6.6 -5.42198 | overlap 3446769 TCCCAAAAAAGAAAA TGTAATCAGCCTTC ATTC GAAGGCTGAGCAAA GCGTTTATCTAAACC TERM 3480 3446790 - 3446769 - R 100 -13.1 -3.5268 | overlap 3446764 AAAAAGAAAATGTAA TCAGCCTTC ATTC GAAGGCTGA GCAAAGCGTTTATCT Swoo_2820 3448098 - 3446800 - | FAD dependent oxidoreductase TERM 3481 3446858 - 3446838 - G 75 -9.8 -3.55524 | opp_overlap 3446838, overlap 3446834 AATCACTCAAATCAA TGTCAGGT TGTTC ACCTGACA TCTGTTGAGCCAAGA TERM 3482 3446838 - 3446858 + g 71 -9.8 -3.06696 | opp_overlap 3446838 3446834 AATCACTCAAATCAA TGTCAGGT TGTTC ACCTGACA TCTGTTGAGCCAAGA Swoo_2821 3449191 - 3448151 - | proline racemase TERM 3483 3449094 - 3449077 - G 71 -9.9 -3.01712 | overlap 3449093 TGGTCTCGCCTAAGA TCTCTGG GTAA CCAGAGA TGATGATCCTAAGTG Swoo_2822 3449381 - 3450295 + | dihydrodipicolinate synthetase TERM 3484 3450585 - 3450607 + G 79 -4 -5.26316 | overlap 3450587 ATGTTTGAACCCAGA GGCCACGATA TGA TGTCGGGGGC TTTTTTATACCCTCC Swoo_2823 3450417 - 3451418 + | proline racemase TERM 3485 3452006 - 3452020 + G 71 -10 -2.70298 | overlap 3452005 ACCGCCTCAGCGTTA GCTGCA GGT TGCAGC GTTATCGTTAAAGGC Swoo_2824 3451469 - 3453034 + | aldehyde dehydrogenase TERM 3486 3453087 - 3453054 - f 90 -8.4 -4.9645 | opp_overlap 3453055 3453059 3453063, overlap 3453046 3453055 ATTAGAATAATAAAA TTAAATAAAGGGAA GATAGT TTCCCTTTATTTAT ATTGGCAATAACGGT TERM 3487 3453086 - 3453055 - f 90 -11.9 -3.56244 | opp_overlap 3453055 3453059 3453063, overlap 3453046 3453054 TTAGAATAATAAAAT TAAATAAAGGGAA GATAGT TTCCCTTTATTTA TATTGGCAATAACGG TERM 3488 3453055 - 3453086 + F 91 -12.6 -3.04144 | opp_overlap 3453046 3453055 3453054, overlap 3453059 3453063 TTAGAATAATAAAAT TAAATAAAGGGAAG ATAG TTTCCCTTTATTTA TATTGGCAATAACGG TERM 3489 3453059 - 3453082 + F 79 -9 -4.19624 | opp_overlap 3453055 3453054, overlap 3453055 3453063 AATAATAAAATTAAA TAAAGGGAAG ATAG TTTCCCTTTA TTTATATTGGCAATA TERM 3490 3453063 - 3453078 + F 72 -5.4 -4.68511 | opp_overlap 3453055 3453054, overlap 3453059 3453055 ATAAAATTAAATAAA GGGAAG ATAG TTTCCC TTTATTTATATTGGC Swoo_2825 3453150 - 3453821 + | GntR family transcriptional regulator TERM 3491 3453872 - 3453891 + F 100 -10 -5.63517 | opp_overlap 3453872 ACTAATGTTTGATAA GGCAGAGC CAAG GTTCTGCC TTTTTTATTTGAGAG Swoo_2826 3453915 - 3454979 + | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 3492 3455003 - 3455022 + T 91 -9.3 -4.96848 | opp_overlap 3455003 TAAGATATTGATAAA CACCAGC CATCGC GCTGGTG TTTTTATATCAAGCC TERM 3493 3455022 - 3455003 - T 81 -9.3 -3.97602 | opp_overlap 3455003 TAAGATATTGATAAA CACCAGC CATCGC GCTGGTG TTTTTATATCAAGCC Swoo_2827 3455843 - 3455031 - | hypothetical protein TERM 3494 3455131 - 3455113 - G 77 -6.7 -4.51378 | ATGCAGAGTATAAAA TAGCAGC CACTT GCCGCTA ATAGGTGTTTAACTG Swoo_2828 3457170 - 3455968 - | diguanylate cyclase TERM 3495 3456409 - 3456393 - G 89 -9.4 -4.57073 | opp_overlap 3456393 CACTCTCTTCAAAAA GGTGGC GATTA GCCACC TTCGTCAGATTATCG TERM 3496 3456393 - 3456409 + g 72 -9.4 -3.19653 | opp_overlap 3456393 CACTCTCTTCAAAAA GGTGGC GATTA GCCACC TTCGTCAGATTATCG TERM 3497 3456781 - 3456771 - G 75 -4.6 -4.9218 | TAGGTAGCAGAAAAA CGGC GAC GCCA TATAAGACTCCTATA TERM 3498 3457039 - 3457027 - G 82 -4.8 -5.30155 | GGAGTAACTAAAAAA GCGA TGAAC TCGC TCTAAGTAGTTCAAC TERM 3499 3457268 - 3457248 - R 91 -12.7 -3.21747 | TGAGTGGATTATCAA GCCTGTTAA GGG TTAACAGGC CAGAGATAAATAGTT Swoo_2829 3457474 - 3457295 - | hypothetical protein TERM 3500 3457772 - 3457805 + r 93 -9.7 -5.14563 | opp_overlap 3457778, overlap 3457775 3457778 ACGAAAAAAAGGTGA AAAAAATGCCAGTCA TCAC TGACTGGCATTGTTA TTTTTTGCTAACAGA TERM 3501 3457775 - 3457802 + r 100 -11.4 -4.67552 | opp_overlap 3457778, overlap 3457772 3457778 AAAAAAAGGTGAAAA AAATGCCAGTCA TCAC TGACTGGCATTG TTATTTTTTGCTAAC TERM 3502 3457778 - 3457799 + r 100 -13.1 -4.42047 | opp_overlap 3457778, overlap 3457775 3457772 AAAAGGTGAAAAAAA TGCCAGTCA TCAC TGACTGGCA TTGTTATTTTTTGCT TERM 3503 3457799 - 3457778 - R 100 -13.1 -5.51165 | opp_overlap 3457778 3457775 3457772 AAAAGGTGAAAAAAA TGCCAGTCA TCAC TGACTGGCA TTGTTATTTTTTGCT Swoo_2830 3459226 - 3457826 - | NAD(P)(+) transhydrogenase (AB-specific) Swoo_2831 3460785 - 3459241 - | NAD(P) transhydrogenase, alpha subunit Swoo_2832 3461743 - 3461159 - | hypothetical protein Swoo_2833 3462106 - 3463836 + | histidine kinase Swoo_2834 3464545 - 3463865 - | exonuclease RNase T and DNA polymerase III Swoo_2835 3466394 - 3464547 - | CBS domain-containing protein TERM 3504 3465284 - 3465259 - G 72 -7.6 -4.11484 | overlap 3465261 GTTAATGCCTCAAAA TAGCCTGATG CGGCCT CATCAGGCTC ATGGGCAAGCAGTAA TERM 3505 3465282 - 3465261 - G 78 -10.2 -3.6543 | overlap 3465259 TAATGCCTCAAAATA GCCTGATG CGGCCT CATCAGGC TCATGGGCAAGCAGT TERM 3506 3465393 - 3465370 - G 80 -6 -4.7497 | gap 1, opp_overlap 3465378, overlap 3465374 GCCAGCCAGCAAAAA GCCA-TCGGTG CTT CACCGAGCAGC TTTTGATTTAATATG TERM 3507 3465388 - 3465374 - G 72 -10 -2.86601 | opp_overlap 3465378, overlap 3465370 GCCAGCAAAAAGCCA TCGGTG CTT CACCGA GCAGCTTTTGATTTA TERM 3508 3466556 - 3466512 - R 83 -8 -4.66537 | opp_overlap 3466511 3466512 3466514, overlap 3466514 3466517 3466519 GTGTGGAAGAGAAAA TATTAGAGCCTAATAGTGTT CATTT AACCCTATTAGGCTCCTAGA TGAAACAGGTCTTGT TERM 3509 3466554 - 3466514 - R 85 -10.6 -3.94773 | opp_overlap 3466514 3466512 3466511, overlap 3466512 3466517 3466519 GTGGAAGAGAAAATA TTAGAGCCTAATAGTGTT CATTT AACCCTATTAGGCTCCTA GATGAAACAGGTCTT TERM 3510 3466551 - 3466517 - R 95 -14.5 -3.02181 | opp_overlap 3466514 3466512 3466511, overlap 3466514 3466512 3466519 GAAGAGAAAATATTA GAGCCTAATAGTGTT CATTT AACCCTATTAGGCTC CTAGATGAAACAGGT TERM 3511 3466549 - 3466519 - R 79 -11.3 -3.04575 | opp_overlap 3466514 3466512 3466511, overlap 3466517 3466514 3466512 AGAGAAAATATTAGA GCCTAATAGTGTT CATTT AACCCTATTAGGC TCCTAGATGAAACAG Swoo_2836 3468364 - 3466571 - | amidohydrolase 3 TERM 3512 3468450 - 3468437 - R 81 -6.7 -4.91657 | AATCAATAAAATAAA GCAGA TCAC TCTGC TAACCAGTTATTTAT Swoo_2837 3468801 - 3468442 - | hypothetical protein TERM 3513 3468939 - 3468924 - R 100 -10.4 -5.56673 | opp_overlap 3468924 ACTGACAACAAAAAA GAGCGC CTAA GCGCTC TTTTTACTCTGTAAC TERM 3514 3468924 - 3468939 + r 91 -10.4 -4.84527 | opp_overlap 3468924 ACTGACAACAAAAAA GAGCGC CTAA GCGCTC TTTTTACTCTGTAAC Swoo_2838 3470686 - 3468968 - | Na+/solute symporter Swoo_2839 3470980 - 3470714 - | hypothetical protein Swoo_2840 3471658 - 3471404 - | hypothetical protein TERM 3515 3471828 - 3471815 - g 72 -3.1 -4.91511 | ATTGTATGAGAAAAA CAACA AGCG TGCTG GCCCTTATTGGCGCT Swoo_2841 3471805 - 3473721 + | hypothetical protein TERM 3516 3473752 - 3473775 + T 100 -15.4 -4.7497 | opp_overlap 3473752 TCCCCTAAACAAAAA CCGCAACCAA GAGC TTGGTTGCGG TTTTTAGTAAGTGAC TERM 3517 3473775 - 3473752 - T 100 -15.4 -5.27335 | opp_overlap 3473752 TCCCCTAAACAAAAA CCGCAACCAA GAGC TTGGTTGCGG TTTTTAGTAAGTGAC Swoo_2842 3474416 - 3473790 - | DSBA oxidoreductase TERM 3518 3474458 - 3474448 - R 75 -3.2 -5.1925 | TGACAATCTAAAAAA CACT TAA AGCG TAAAACAGATCTTCA Swoo_2843 3475266 - 3474451 - | NAD-dependent epimerase/dehydratase Swoo_2844 3476569 - 3475355 - | metal dependent phosphohydrolase TERM 3519 3476489 - 3476506 + g 71 -4.1 -4.79352 | CAGAAACGGGTGATT CTTCCAT GACA ATGGCAG TTTTATTGTGAGTCC TERM 3520 3476968 - 3477011 + r 70 -9 -3.21288 | opp_overlap 3476976 3476987, overlap 3476966 3476969 GTTATAGTTCTTCTG TTCTTAAAGGTGACTAAGAG ACCC CATTTGGTCACCTTAAAGAG TGTTGCTGTCAATTG TERM 3521 3476969 - 3477010 + r 76 -10.3 -2.52291 | opp_overlap 3476976 3476987, overlap 3476968 3476966 TTATAGTTCTTCTGT TCTTAAAGGTGACTAAGAG ACCC CATTTGGTCACCTTAAAGA GTGTTGCTGTCAATT TERM 3522 3477145 - 3477168 + r 100 -15.4 -5.03314 | TAAGTAAAGATCCTT TAGCGCTGCT TTTT AGCAGCGCTA TTTTTTCAAAATGAA Swoo_2845 3477676 - 3477209 - | hypothetical protein TERM 3523 3477777 - 3477749 - R 83 -8.1 -4.41348 | TCCTTGCTAAACAAA TAGCCCTAGGCAA AAT TAACCAAGGGCTA CAAAAGATGCTCCAC Swoo_2846 3478294 - 3477800 - | hypothetical protein TERM 3524 3478492 - 3478457 - R 79 -9 -3.92414 | opp_overlap 3478456 3478457, overlap 3478459 3478460 AGAAACGAGAAAAGA GAGTCTGGATACCGCA CTAT TGCGGTATCCAGAGAG GTATTATTCGCTATC TERM 3525 3478490 - 3478459 - R 100 -16 -3.52813 | opp_overlap 3478457 3478456, overlap 3478457 3478460 AAACGAGAAAAGAGA GTCTGGATACCGCA CTAT TGCGGTATCCAGAG AGGTATTATTCGCTA TERM 3526 3478489 - 3478460 - R 100 -19.5 -2.70061 | opp_overlap 3478457 3478456, overlap 3478459 3478457 AACGAGAAAAGAGAG TCTGGATACCGCA CTAT TGCGGTATCCAGA GAGGTATTATTCGCT Swoo_2847 3480508 - 3478496 - | DNA ligase, NAD-dependent TERM 3527 3480529 - 3480557 + r 89 -10.3 -4.42765 | opp_overlap 3480536, overlap 3480536 ATTTCCAGTGAAACG TGAAAAAGGCCGC AAG GCGGCCTTTCTAA TTTAATTTTTTACAG TERM 3528 3480550 - 3480536 - R 100 -12.8 -4.70879 | opp_overlap 3480529 3480536 GTGAAACGTGAAAAA GGCCGC AAG GCGGCC TTTCTAATTTAATTT TERM 3529 3480536 - 3480550 + r 100 -12.8 -4.18351 | opp_overlap 3480536, overlap 3480529 GTGAAACGTGAAAAA GGCCGC AAG GCGGCC TTTCTAATTTAATTT Swoo_2848 3481519 - 3480584 - | cell division protein ZipA Swoo_2849 3484948 - 3481547 - | chromosome segregation protein SMC TERM 3530 3483811 - 3483829 + g 72 -8.2 -3.92373 | TCAAAGCTTGAGACT GAGTTTCA CCT TGAGACTC TTTCTCCGTCAGCTG Swoo_2850 3485165 - 3485938 + | hypothetical protein TERM 3531 3485979 - 3485960 - f 74 -9.2 -3.14211 | opp_overlap 3485960 3485958, overlap 3485939 AGTTCGCCGTACTAA GGGGGCGT AACA AAGCCCCC TGTTGATTCAGTATC TERM 3532 3485960 - 3485979 + F 75 -9.2 -3.26366 | opp_overlap 3485939 3485960, overlap 3485958 AGTTCGCCGTACTAA GGGGGCGT AACA AAGCCCCC TGTTGATTCAGTATC TERM 3533 3486074 - 3486089 + F 76 -9 -3.84406 | AACTCCTTACTTACT CACTGC TTGC GCAGTG TTATTGTACTCGACA TERM 3534 3486178 - 3486158 - g 70 -2.5 -5.02074 | TGAGTGGCGAAAAAA GGAAAAGAG TCT CTATATTCC CAAAAATAAGCCGGA Swoo_2851 3486129 - 3486761 + | hypothetical protein Swoo_2852 3486871 - 3487635 + | hypothetical protein TERM 3535 3488049 - 3488039 - g 76 -8.2 -4.22214 | opp_overlap 3488039 3488038, overlap 3488040 ATGGATGCAAAAGAA CCCC CAT GGGG ATTTAGTCATGCCCG TERM 3536 3488493 - 3488533 + G 72 -10.5 -2.88268 | opp_overlap 3488501 3488503, overlap 3488492 3488489 TATAATGAGTGGCTC CCCATCAACACTTGGAACA TGA TGTTTCAAGTAGAGATGGG ATCTTTTCCTTGGCG Swoo_2853 3487671 - 3488588 + | beta-lactamase domain-containing protein TERM 3537 3488604 - 3488577 - T 75 -4.2 -5.10461 | opp_overlap 3488600, overlap 3488578 TCTATCGAAGAAAAA TCCAAACAGTAA ACAA TCACTATTTGGG GCGACTCTGTAGTTG TERM 3538 3488603 - 3488578 - T 70 -7.7 -3.65554 | opp_overlap 3488600, overlap 3488577 CTATCGAAGAAAAAT CCAAACAGTAA ACAA TCACTATTTGG GGCGACTCTGTAGTT TERM 3539 3488616 - 3488626 + T 72 -5.4 -4.62471 | overlap 3488606 3488600 TGGGGCGACTCTGTA GTTG TTT CAAC TTTTTAAGGATTAAG Swoo_2854 3490560 - 3488596 - | TPR repeat-containing protein TERM 3540 3489429 - 3489445 + g 71 -3.7 -4.82667 | TAGGCATATGGCAGC CAGTACA ATC TTTACTG TTTTTAATATCGTCA TERM 3541 3490614 - 3490600 - R 74 -8.6 -3.4582 | opp_overlap 3490602, overlap 3490598 TGATTGCACTAAACA GAGCTT GGC AAGCTC CCTTCAAACAGTTCT Swoo_2855 3491962 - 3490715 - | response regulator receiver modulated diguanylate cyclase Swoo_2856 3493189 - 3492062 - | RDD domain-containing protein TERM 3542 3492943 - 3492975 + g 95 -3.3 -5.64274 | opp_overlap 3492943 GCATGAGTGAGTAGA GTCCCCACTTGAAGA ATT TCCCCAATTGGCGAC TTTTTTTCTGAATAG Swoo_2857 3493477 - 3494445 + | cysteine synthase A TERM 3543 3494498 - 3494462 - T 95 -12.6 -3.28924 | gap 2, opp_overlap 3494465 3494472, overlap 3494472 CATCTGTCTCTATAA GGCAA-AAAAA-CCAGGC TTA GCCTGGTTTTTTATTGCC TCAGGAGCGCTAACC TERM 3544 3494465 - 3494493 + T 95 -13.3 -3.05384 | opp_overlap 3494462 3494472, overlap 3494472 CTGTCTCTATAAGGC AAAAAAACCAGGC TTA GCCTGGTTTTTTA TTGCCTCAGGAGCGC TERM 3545 3494486 - 3494472 - T 100 -11.4 -5.55698 | opp_overlap 3494465 3494472, overlap 3494462 TATAAGGCAAAAAAA CCAGGC TTA GCCTGG TTTTTTATTGCCTCA TERM 3546 3494472 - 3494486 + T 100 -11.4 -5.4833 | opp_overlap 3494472 3494462, overlap 3494465 TATAAGGCAAAAAAA CCAGGC TTA GCCTGG TTTTTTATTGCCTCA Swoo_2858 3495210 - 3494533 - | TetR family transcriptional regulator TERM 3547 3495538 - 3495526 - H 75 -7.7 -4.08216 | CTAGTTTGCCTAAAA CAGCT CTG AGCTG ACTACTTTCTTATAC Swoo_2859 3495735 - 3496166 + | signal transduction protein Swoo_2860 3496377 - 3496745 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 Swoo_2861 3496748 - 3497389 + | NADH-quinone oxidoreductase, B subunit TERM 3548 3497391 - 3497365 - f 74 -8.7 -3.40382 | GATCAAAGCCGATAA GCTCACACCGC CTGAT GAGGTGTAAGC ATGAGCATATTCACT Swoo_2862 3497392 - 3499188 + | NADH dehydrogenase I, D subunit Swoo_2863 3499197 - 3499736 + | NADH dehydrogenase (ubiquinone) 24 kDa subunit Swoo_2864 3499736 - 3501100 + | NADH-quinone oxidoreductase, F subunit TERM 3549 3501898 - 3501884 - g 73 -6.4 -4.41137 | overlap 3501885 TAGAAGGATAACAAA CCGTCA CCA TGACGA GGTAAATGGCCACTT TERM 3550 3502083 - 3502073 - g 77 -6.8 -4.55798 | TACTCCAAATGAAAA CTGC ATC GCAG TGGGCTCTGTACGCA Swoo_2865 3501087 - 3503930 + | NADH-quinone oxidoreductase, chain G Swoo_2866 3503927 - 3504880 + | NADH dehydrogenase (quinone) Swoo_2867 3504893 - 3505408 + | NADH-quinone oxidoreductase, chain I Swoo_2868 3505454 - 3506071 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TERM 3551 3506138 - 3506152 + G 86 -7.1 -5.16206 | CTTTTGGCCTGCTAA GCAGG AGGAA CCTGC TTTTTATCTTGCTTT Swoo_2869 3506068 - 3506370 + | NADH-ubiquinone oxidoreductase chain 4L TERM 3552 3506627 - 3506646 + G 75 -9.4 -3.48395 | GACCCTCTCTCTCTG GTGATGAT CACC ATCATCAC TTGTATCGGCGCGCT Swoo_2870 3506372 - 3508240 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 3553 3508264 - 3508277 + G 77 -4.5 -5.09173 | ACTTTAGTGATATTG CCACT TATT GGTGG TTTTTTAGCATGTTG Swoo_2871 3508237 - 3509850 + | proton-translocating NADH-quinone oxidoreductase, chain M Swoo_2872 3509847 - 3511268 + | proton-translocating NADH-quinone oxidoreductase, chain N Swoo_2873 3511411 - 3512493 + | O-methyltransferase family protein TERM 3554 3512519 - 3512549 + F 100 -15 -2.73483 | opp_overlap 3512507 3512506, overlap 3512527 AACGCTCTACCATTA GCCATAGATTAAGT TTA ATTTAATCTATGGC TAATTAAAATCAAAT Swoo_2874 3512624 - 3513592 + | C4-dicarboxylate transporter/malic acid transport protein TERM 3555 3514206 - 3514180 - g 81 -11.6 -3.14132 | overlap 3514195 TTCGGTTTTCATTAA TCAGTGGCGCAG CAA CTGCAGCACTGA CTGCACCAGCAGTTT TERM 3556 3514207 - 3514218 + G 72 -5.8 -4.56597 | opp_overlap 3514195 CAACTGCAGCACTGA CTGC ACCA GCAG TTTTTGCAGCAACAG TERM 3557 3514855 - 3514865 + G 72 -5.4 -4.45083 | ATACCGATAAAGTAC CTCA CAG TGAG TTTTCTCAATATAGC TERM 3558 3515676 - 3515662 - g 75 -8.6 -3.8505 | overlap 3515667 AGCAAGATTACCAAA CAGAGT CAG ACTCTG AGTCAGCTAAAGGCA Swoo_2875 3514134 - 3516824 + | TonB-dependent receptor plug TERM 3559 3516847 - 3516883 + T 100 -21.9 -3.6217 | opp_overlap 3516851 3516857, overlap 3516857 TCACTTAATATGATT GAAAGAAAAACGGCACC TAA GGTGCCGTTTTTTTTTC TTATCTATAGTGGAT TERM 3560 3516879 - 3516851 - T 100 -14.7 -3.71607 | opp_overlap 3516847 3516857, overlap 3516857 TTAATATGATTGAAA GAAAAACGGCACC TAA GGTGCCGTTTTTT TTTCTTATCTATAGT TERM 3561 3516873 - 3516857 - T 100 -13.7 -5.30616 | opp_overlap 3516857 3516847, overlap 3516851 TGATTGAAAGAAAAA CGGCACC TAA GGTGCCG TTTTTTTTTCTTATC TERM 3562 3516857 - 3516873 + T 100 -13.7 -6.41881 | opp_overlap 3516851 3516857, overlap 3516847 TGATTGAAAGAAAAA CGGCACC TAA GGTGCCG TTTTTTTTTCTTATC Swoo_2876 3518439 - 3516898 - | C4-dicarboxylate anaerobic carrier TERM 3563 3517221 - 3517203 - G 74 -8.2 -4.15006 | overlap 3517191 3517189 ATACCGATTGGAAAA TCAGCATA AAC CATGCTGA AAGGGCATTAGGAAG Swoo_2877 3520063 - 3518618 - | sodium/pantothenate symporter Swoo_2878 3520259 - 3520056 - | hypothetical protein TERM 3564 3520868 - 3520878 + G 71 -2.4 -5.06414 | ATTAGAAAATTTGTT GGGG CGA CCAC TTTTTATTCGCCAGG Swoo_2879 3520734 - 3521639 + | LysR family transcriptional regulator TERM 3565 3521714 - 3521740 + T 83 -10.3 -3.81741 | gap 1, opp_overlap 3521702 3521717, overlap 3521717 AATCGTTCCAAACAA GA-ACGGAGCTA ATAA TAGCTCCGTCTC TTTACCTTATACCTT TERM 3566 3521717 - 3521736 + T 89 -12.2 -3.31177 | opp_overlap 3521702 3521717, overlap 3521714 CGTTCCAAACAAGAA CGGAGCTA ATAA TAGCTCCG TCTCTTTACCTTATA TERM 3567 3521736 - 3521717 - T 95 -12.2 -4.08557 | opp_overlap 3521717 3521714, overlap 3521702 CGTTCCAAACAAGAA CGGAGCTA ATAA TAGCTCCG TCTCTTTACCTTATA Swoo_2880 3523231 - 3521747 - | formate/nitrite transporter TERM 3568 3521980 - 3522001 + g 71 -4.4 -4.66609 | overlap 3521980 3521982 CGGCAACCGAATCCT GTGGTGAT AGGGTC ATCACCTC TTTTTGCATCAAATC TERM 3569 3522453 - 3522441 - G 72 -3.4 -4.89477 | TTGTTAACAATAAAA TGAC TCATT GTCA GATCGGTAAATTGTG Swoo_2881 3523607 - 3523335 - | hypothetical protein Swoo_2882 3524156 - 3525688 + | hypothetical protein TERM 3570 3525736 - 3525689 - f 72 -8.6 -3.29144 | gap 1, opp_overlap 3525678, overlap 3525691 CCAGCGCTTCTATAA CAGGAGTGTT-AATGGCGGGA GGGGTTT TCCCGCCATTAAAAACACCTA AGATTAATATCAGTT TERM 3571 3525734 - 3525691 - f 70 -9 -3.21395 | gap 1, opp_overlap 3525678, overlap 3525689 AGCGCTTCTATAACA GGAGTGTT-AATGGCGGGA GGGGTTT TCCCGCCATTAAAAACACC TAAGATTAATATCAG TERM 3572 3526028 - 3526040 + F 72 -6.3 -4.46212 | TATAACTATGGTTAA TTGGT CTT ACCAA TTTTCTGATAACCGA Swoo_2883 3526261 - 3528543 + | formate acetyltransferase TERM 3573 3528611 - 3528587 - f 74 -10 -2.60486 | opp_overlap 3528610, overlap 3528586 AATAACGGCGATAAC TTGGCTGCAC CTCTT GTGCAGCCGA TACCCAAACTGTTCT TERM 3574 3528612 - 3528661 + F 75 -8.1 -3.81958 | gap 1, overlap 3528610 CTCTTGTGCAGCCGA TACCCAAACTGTT-CTCGATGC GAATTAA GCATTATGTAACAGTTTGGGTA TATTTATTTAAAACT Swoo_2884 3528742 - 3529482 + | pyruvate formate-lyase activating enzyme Swoo_2885 3529915 - 3529517 - | hypothetical protein TERM 3575 3529707 - 3529677 - G 70 -7.5 -3.89336 | gap 1 TCAAGCAAAGTTAAA GGTAGCGGATGGCG TGAG CGCCAACC-CAACC ACAGTAAGCCCTGAA TERM 3576 3530339 - 3530358 + G 71 -5 -4.45068 | gap 1 TAGGTGCCTTCTCAT CTC-ACCGT GAA GCGGTTGAG TTTATTGTTAAAGAT Swoo_2886 3530155 - 3531351 + | acetate kinase TERM 3577 3531392 - 3531352 - f 78 -9.7 -3.33696 | opp_overlap 3531349 3531349 3531352 3531353 3531367, overlap 3531354 3531356 3531367 CGCCTTCTGAAGTAA CACATTGGCCTGAAATCGC TAA GCGGTTTCAGGCCAAAACT CATTATTTTTGAGTT TERM 3578 3531353 - 3531391 + F 80 -11 -3.18327 | opp_overlap 3531352 3531354 3531356 3531367, overlap 3531352 3531349 3531349 3531367 GCCTTCTGAAGTAAC ACATTGGCCTGAAATCGC TAA GCGGTTTCAGGCCAAAAC TCATTATTTTTGAGT TERM 3579 3531390 - 3531354 - f 100 -14.5 -3.23853 | opp_overlap 3531353 3531352 3531349 3531349 3531367, overlap 3531352 3531356 3531367 CCTTCTGAAGTAACA CATTGGCCTGAAATCGC TAA GCGGTTTCAGGCCAAAA CTCATTATTTTTGAG TERM 3580 3531388 - 3531356 - f 100 -19.3 -3.18366 | opp_overlap 3531353 3531352 3531349 3531349 3531367, overlap 3531354 3531352 3531367 TTCTGAAGTAACACA TTGGCCTGAAATCGC TAA GCGGTTTCAGGCCAA AACTCATTATTTTTG Swoo_2887 3531467 - 3533608 + | phosphate acetyltransferase TERM 3581 3533625 - 3533657 + F 89 -12.9 -2.72049 | opp_overlap 3533633, overlap 3533633 3533652 TATTTCGTATGAAAA TGCAAAAAGCCTGTC AAT GACAGGCTTTTTTTA TACTTAAAAACTGTA TERM 3582 3533633 - 3533649 + F 100 -12.3 -5.71983 | opp_overlap 3533633, overlap 3533625 ATGAAAATGCAAAAA GCCTGTC AAT GACAGGC TTTTTTTATACTTAA TERM 3583 3533649 - 3533633 - f 100 -12.3 -4.88222 | opp_overlap 3533625 3533633 ATGAAAATGCAAAAA GCCTGTC AAT GACAGGC TTTTTTTATACTTAA Swoo_2888 3533987 - 3534382 + | hypothetical protein TERM 3584 3534815 - 3534834 + F 90 -10.8 -4.63542 | opp_overlap 3534815 TTTCAGACAAAAAAA TAGCAACC CTTA GGTTGCTA TTTTTACAGCTTGTA TERM 3585 3534834 - 3534815 - f 100 -10.8 -5.71712 | opp_overlap 3534815 TTTCAGACAAAAAAA TAGCAACC CTTA GGTTGCTA TTTTTACAGCTTGTA TERM 3586 3535002 - 3535020 + F 71 -6.8 -4.18494 | GTAGGGTCTGAGGCA TGTCATTA CTT TGATGACA TTTTGCCTAAAAGTA TERM 3587 3535177 - 3535191 + F 83 -7.2 -4.86773 | AAATAGTATCTTCAG CTGAAA GTC TTTCAG TTTTTAATAATTTTA Swoo_2889 3535315 - 3535539 + | hypothetical protein TERM 3588 3535611 - 3535570 - T 100 -14.1 -3.66286 | gap 1, opp_overlap 3535604, overlap 3535573 AGACTATGCCAACAA TAACTTCATCGCCTACAAGC TAA ACTT-TAGACGATGAAGTTA ACACTTTATATTGAT TERM 3589 3535608 - 3535573 - T 90 -11.4 -3.96068 | gap 1, opp_overlap 3535604, overlap 3535570 CTATGCCAACAATAA CTTCATCGCCTACAAGC TAA ACTT-TAGACGATGAAG TTAACACTTTATATT Swoo_2890 3536540 - 3535632 - | hypothetical protein Swoo_2891 3537785 - 3536601 - | hypothetical protein Swoo_2892 3537862 - 3538233 + | dihydroneopterin aldolase Swoo_2895 3538884 - 3539807 + | hypothetical protein TERM 3590 3539839 - 3539816 - T 100 -9.6 -5.39721 | opp_overlap 3539816 TTATTAGATAAAAAA GAGCGATACC CGTA GATATCGCCC TTTATCTATTACACT Swoo_2896 3542330 - 3539865 - | hypothetical protein TERM 3591 3541543 - 3541500 - G 80 -11.7 -2.89267 | overlap 3541495 3541515 GGCAACCACATCATA GTGGCGCTGACAGTATCGC TGAGCC GCGATACCGATAGCGGCAC ATGCAAGCGCGATCC Swoo_2897 3543070 - 3542330 - | ABC transporter related Swoo_2898 3543114 - 3543686 + | arylesterase Swoo_2899 3543904 - 3544905 + | hypothetical protein TERM 3592 3544942 - 3544928 - f 95 -12.8 -3.31461 | opp_overlap 3544928 TAGCTAGTTTTATAA GGCCGC AAT GCGGCC TTTCATATCATTTAT TERM 3593 3544928 - 3544942 + F 100 -12.8 -3.91689 | opp_overlap 3544928 TAGCTAGTTTTATAA GGCCGC AAT GCGGCC TTTCATATCATTTAT TERM 3594 3545552 - 3545535 - g 74 -3.5 -5.09426 | gap 1 CTCAATGGCAAAAAA TATCACCA TTA TGG-GATA TGGCATGGAGGAGAC Swoo_2900 3545212 - 3547854 + | hypothetical protein TERM 3595 3547901 - 3547874 - f 78 -5.5 -5.03994 | opp_overlap 3547879, overlap 3547879 TCGTAGATAGAAAAA GATAAGGCCGG TTCATT CCGGCCTTTTT TCTCTTACCTGAGCC TERM 3596 3547879 - 3547896 + F 100 -9.8 -5.48063 | opp_overlap 3547879 3547874 GATAGAAAAAGATAA GGCCGG TTCATT CCGGCC TTTTTTCTCTTACCT TERM 3597 3547896 - 3547879 - f 85 -9.8 -4.16226 | opp_overlap 3547879, overlap 3547874 GATAGAAAAAGATAA GGCCGG TTCATT CCGGCC TTTTTTCTCTTACCT Swoo_2901 3547933 - 3549114 + | hypothetical protein TERM 3598 3549124 - 3549139 + T 72 -9 -3.29511 | AGTTAGTCTGTCCAA GTGGCT GAAA AGCCAC TTCTCACACGGTCGC Swoo_2902 3550189 - 3549164 - | AraC family transcriptional regulator TERM 3599 3549217 - 3549195 - G 70 -6.3 -4.183 | TTAAGCCTCAAGAAA TGACCAGGT GGATG ACCTAGCCA ATGTTTAAAACTTTG TERM 3600 3549637 - 3549627 - G 71 -2.4 -5.16572 | opp_overlap 3549628, overlap 3549628 ACTGAAGCTAAAAAA CTCG CAT CGCG CTCCTCTTCAGCTAA TERM 3601 3550284 - 3550300 + r 95 -12.3 -4.06678 | opp_overlap 3550284 ATGAGTCAAAAAAAA GCCTGCA AAA TGCAGGC TTTATATCAATCGGT TERM 3602 3550300 - 3550284 - R 100 -12.3 -5.82316 | opp_overlap 3550284 ATGAGTCAAAAAAAA GCCTGCA AAA TGCAGGC TTTATATCAATCGGT TERM 3603 3550340 - 3550359 + r 72 -5.7 -4.63932 | overlap 3550336 TGGCATCTAGGTCAG TGGCTGG TTTTTC TCAGCCA TTTTATTAAAGACTG Swoo_2903 3551362 - 3550331 - | peptidase S49 domain-containing protein TERM 3604 3551501 - 3551486 - R 100 -10.4 -5.71983 | opp_overlap 3551486 TTAACCATAAAAAAA CCCAGC ATTT GCTGGG TTTTTAAACAAGTTT TERM 3605 3551486 - 3551501 + r 89 -10.4 -4.58685 | opp_overlap 3551486 TTAACCATAAAAAAA CCCAGC ATTT GCTGGG TTTTTAAACAAGTTT Swoo_2904 3554040 - 3551569 - | hypothetical protein Swoo_2905 3554304 - 3555041 + | short-chain dehydrogenase/reductase SDR TERM 3606 3555061 - 3555085 + T 83 -11.5 -3.19178 | opp_overlap 3555066, overlap 3555066 AAATAGACAAGATGC AAAAAGGGACC TGA GGTCCCTTTTC TATTCATCACTTTAT TERM 3607 3555080 - 3555066 - T 100 -11.4 -4.76312 | opp_overlap 3555061 3555066 GACAAGATGCAAAAA GGGACC TGA GGTCCC TTTTCTATTCATCAC TERM 3608 3555066 - 3555080 + T 100 -11.4 -4.70583 | opp_overlap 3555066, overlap 3555061 GACAAGATGCAAAAA GGGACC TGA GGTCCC TTTTCTATTCATCAC TERM 3609 3555129 - 3555111 - T 71 -8.2 -3.46647 | opp_overlap 3555115, overlap 3555109 TTTATGTATTAAATA TCTACCTC TGC GAAGTAGA TGGCTGTTTTCCCTT Swoo_2906 3556015 - 3555104 - | hypothetical protein TERM 3610 3555766 - 3555750 - G 71 -5.1 -4.52857 | ACCCTTGAGATAAAA CTGCCTA AAC CAAGCAG TAAAAGCTCACCTTT TERM 3611 3556115 - 3556100 - R 100 -11.8 -5.28176 | opp_overlap 3556100 TCTAGGTACAAAAAA GGCCGC TAAT GCGGCC TTTTACTCTGACTGA TERM 3612 3556100 - 3556115 + r 93 -11.8 -4.3586 | opp_overlap 3556100 TCTAGGTACAAAAAA GGCCGC TAAT GCGGCC TTTTACTCTGACTGA Swoo_2907 3557017 - 3556154 - | pseudouridine synthase Swoo_2908 3557690 - 3557010 - | segregation and condensation protein B Swoo_2909 3558479 - 3557691 - | chromosome segregation and condensation protein ScpA TERM 3613 3558362 - 3558344 - G 91 -9.6 -4.82128 | GGATCAAATATAAAA GAAGATCC AAA GGACCTTC AAAAGACTCGAGAAA Swoo_2910 3559236 - 3558595 - | Sua5/YciO/YrdC/YwlC family protein Swoo_2911 3560153 - 3559290 - | phosphotransferase domain-containing protein TERM 3614 3560503 - 3560521 + H 100 -11.7 -5.42265 | opp_overlap 3560503 AAGATTCAACAATAA GCCCGCA TAGAT TGCGGGC TTTTTTGTACTTTAA TERM 3615 3560521 - 3560503 - H 90 -11.7 -3.98981 | opp_overlap 3560503 AAGATTCAACAATAA GCCCGCA TAGAT TGCGGGC TTTTTTGTACTTTAA Swoo_2912 3560601 - 3562160 + | anthranilate synthase component I TERM 3616 3562527 - 3562508 - g 71 -2.1 -5.1356 | TTTCATCAACAAAAA GGCATAT TTAGCC ATCTGCC CTCACCTCTTCCCGT Swoo_2913 3562157 - 3562762 + | glutamine amidotransferase of anthranilate synthase Swoo_2914 3562759 - 3563814 + | anthranilate phosphoribosyltransferase TERM 3617 3565115 - 3565100 - g 70 -6.1 -4.21974 | TCATTACCGAATAAA CCAGC TTCGAT GCTGG CGGGTGGGTTAAGCC Swoo_2915 3563831 - 3565261 + | indole-3-glycerol-phosphate synthase, phosphoribosylanthranilate isomerase TERM 3618 3566069 - 3566084 + G 70 -9 -3.14284 | overlap 3566050 3566064 3566062 3566068 GTGGTTCTAATGCCA TCGGCA TGTT TGCCGA CTTTATTGATGAAGA Swoo_2916 3565360 - 3566583 + | tryptophan synthase, beta subunit Swoo_2917 3566576 - 3567394 + | tryptophan synthase, alpha subunit TERM 3619 3567406 - 3567435 + T 100 -18.1 -3.53811 | opp_overlap 3567406 3567412, overlap 3567412 3567433 TTAGCTTAATAGATA CAAAAATAGCGCC CTTT GGCGCTATTTTTG TTTAAGAAGCATGAA TERM 3620 3567435 - 3567406 - T 100 -18.1 -3.10245 | opp_overlap 3567406 3567412 3567433, overlap 3567412 TTAGCTTAATAGATA CAAAAATAGCGCC CTTT GGCGCTATTTTTG TTTAAGAAGCATGAA TERM 3621 3567412 - 3567429 + T 100 -11.3 -5.27335 | opp_overlap 3567412 3567406, overlap 3567406 TAATAGATACAAAAA TAGCGCC CTTT GGCGCTA TTTTTGTTTAAGAAG TERM 3622 3567429 - 3567412 - T 93 -11.3 -5.09685 | opp_overlap 3567406 3567412, overlap 3567406 TAATAGATACAAAAA TAGCGCC CTTT GGCGCTA TTTTTGTTTAAGAAG Swoo_2918 3568637 - 3567465 - | metal dependent phosphohydrolase TERM 3623 3569396 - 3569377 - g 81 -2.2 -5.51078 | opp_overlap 3569378, overlap 3569378 AAAATAAAAAGAAAA TTTGATAT TTCA ATTTCAAA AACAGATTACAACTA TERM 3624 3569865 - 3569847 - g 83 -6 -5.03314 | opp_overlap 3569849, overlap 3569849 3569861 TGCATTTCTAAAAAA CAGCATGT ACG ACATGCTT GCTACCGATGATGAT TERM 3625 3569863 - 3569849 - g 78 -8.6 -4.14633 | opp_overlap 3569849, overlap 3569847 3569861 CATTTCTAAAAAACA GCATGT ACG ACATGC TTGCTACCGATGATG Swoo_2919 3569308 - 3571485 + | arachidonate 15-lipoxygenase TERM 3626 3571519 - 3571550 + F 86 -8.8 -4.62069 | opp_overlap 3571519 AAGGTTAATCTCAAA TCGGTGCCAGTAAA AATA TTTACTATCACCGA TTTTTAAAATAACAA TERM 3627 3571550 - 3571519 - f 83 -11 -3.66921 | opp_overlap 3571519 AAGGTTAATCTCAAA TCGGTGCCAGTAAA AATA TTTACTATCACCGA TTTTTAAAATAACAA Swoo_2920 3571737 - 3573608 + | sensor diguanylate cyclase Swoo_2921 3574192 - 3576771 + | TonB-dependent receptor TERM 3628 3576852 - 3576885 + F 100 -9 -5.94713 | opp_overlap 3576858, overlap 3576853 TCCATCTCCTTGGTT ACACGAGTTTTAGG GTCATG TCTAAAACTCGTGG TTTTTTTTCTAAGCT TERM 3629 3576853 - 3576884 + F 100 -12.5 -4.15201 | opp_overlap 3576858, overlap 3576852 CCATCTCCTTGGTTA CACGAGTTTTAGG GTCATG TCTAAAACTCGTG GTTTTTTTTCTAAGC Swoo_2922 3577078 - 3578454 + | TonB family protein Swoo_2923 3580626 - 3578491 - | transcriptional regulator, CadC TERM 3630 3582083 - 3582067 - g 72 -6.6 -4.15565 | TCGATTACTGGAAAA GCCAAT ATCAG ATTGGC TATACCCGTGCCAGT TERM 3631 3582606 - 3582596 - g 77 -6.8 -4.4773 | CGATATCAAGGAAAA CAGC TAC GCTG GCTACACTAAGGTTA TERM 3632 3582799 - 3582815 + G 72 -8.7 -3.61178 | opp_overlap 3582787 3582785 ATATCGCCATGGACT GGCGAGA AGA TCTCGTC TTTAGGGTCGCTGCA Swoo_2924 3580905 - 3583532 + | TonB-dependent receptor Swoo_2925 3583637 - 3584185 + | intracellular septation protein A Swoo_2926 3584283 - 3584582 + | YCII-related Swoo_2927 3584592 - 3585398 + | exodeoxyribonuclease III TERM 3633 3585456 - 3585428 - T 100 -19.1 -4.05033 | opp_overlap 3585428 CGTAGTCGACATAAA CCCCATGATTGAA GCT TTCAATCATGGGG TTTTCTTATTGCAAC TERM 3634 3585428 - 3585456 + T 100 -19.1 -4.89477 | opp_overlap 3585428 CGTAGTCGACATAAA CCCCATGATTGAA GCT TTCAATCATGGGG TTTTCTTATTGCAAC Swoo_2928 3586420 - 3585533 - | hypothetical protein TERM 3635 3586103 - 3586091 - G 74 -7.7 -4.0371 | opp_overlap 3586091 TAGTGGCGAGATAAA TTGGC TTT GCCAA TTAATTAACGGCTCA Swoo_2929 3586664 - 3587191 + | Tat pathway signal sequence domain-containing protein TERM 3636 3587506 - 3587518 + G 70 -5.5 -4.3341 | GGCGGTTCCTCTATC CACTG GGC CGGTG TTTCTCTTCGTTTTA Swoo_2930 3587215 - 3588798 + | glucose-methanol-choline oxidoreductase Swoo_2931 3588906 - 3589895 + | pyruvate dehydrogenase (acetyl-transferring) TERM 3637 3589960 - 3589943 - g 79 -9.9 -3.72532 | overlap 3589939 CAACGAATAAATTAA CCATTGC ACGC GCAATGG CAGAATCCCTAGCTC Swoo_2932 3589921 - 3590934 + | transketolase central region Swoo_2933 3590937 - 3591173 + | biotin/lipoyl attachment domain-containing protein TERM 3638 3591202 - 3591182 - g 82 -9.1 -4.19238 | overlap 3591184 GTCTTAAGTGGAAAA TACACTAAG TAA CTTAGTGCA CCTCAAGGGCGTCAG TERM 3639 3591200 - 3591184 - g 77 -9.5 -3.69618 | overlap 3591182 CTTAAGTGGAAAATA CACTAAG TAA CTTAGTG CACCTCAAGGGCGTC Swoo_2934 3591174 - 3591860 + | dehydrogenase catalytic domain-containing protein TERM 3640 3591925 - 3591946 + G 70 -9.5 -2.90496 | opp_overlap 3591925 3591939, overlap 3591922 CTTGAACGAATAAAA GTAGACGGT CAAT ATCGTCTAC TGGTTTGGGAACCAG TERM 3641 3591946 - 3591925 - g 83 -7.3 -4.78572 | opp_overlap 3591922 3591925, overlap 3591939 CTTGAACGAATAAAA GTAGACGGT CAAT ATCGTCTAC TGGTTTGGGAACCAG Swoo_2935 3591871 - 3592563 + | hypothetical protein TERM 3642 3594579 - 3594568 - g 70 -3 -4.9792 | CACTGTATAGAAAAA TGAA AAAA TTCA ACATTATATCTCCCA Swoo_2936 3592665 - 3594617 + | Fis family GAF modulated sigma54 specific transcriptional regulator Swoo_2937 3595989 - 3594790 - | hypothetical protein TERM 3643 3595974 - 3595960 - G 72 -3.6 -4.91977 | CACTAAAATAGAAAA CCTTAT GGA ATAAAG TAATTTGTTGTTCAT Swoo_2938 3597625 - 3596381 - | hypothetical protein Swoo_2939 3598358 - 3597786 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3644 3598219 - 3598204 - G 76 -4 -5.0916 | overlap 3598206 GGCCCAATAGAAAAA TAGGAT TCAC ATCCCA TCACATCCACAAAAA TERM 3645 3598581 - 3598562 - R 100 -12.2 -6.09196 | opp_overlap 3598562 TCTAAAACAAAAAAA CGCCTGAT AAAT ATCAGGCG TTTTAGATAGTCCTT TERM 3646 3598562 - 3598581 + r 95 -12.2 -4.2231 | opp_overlap 3598562 TCTAAAACAAAAAAA CGCCTGAT AAAT ATCAGGCG TTTTAGATAGTCCTT TERM 3647 3598605 - 3598618 + r 77 -6.7 -4.56367 | opp_overlap 3598604 AGTCCTTAGACAAGC GAGGA TTAA TCCTC TTTGTTTATCGCCTC Swoo_2940 3600679 - 3598610 - | peptidase S9 prolyl oligopeptidase TERM 3648 3601543 - 3601524 - g 72 -3.6 -4.91573 | AAAACATATCAAAAA GATGGT TCCTAAAT ACCATC TACCTCAAGCCGTTT Swoo_2941 3601003 - 3602724 + | AMP-dependent synthetase and ligase Swoo_2942 3603813 - 3602734 - | AraC family transcriptional regulator TERM 3649 3603477 - 3603466 - G 82 -7.2 -4.71186 | ATGATTAACATAAAA GGCC GACT GGCC TCGAGAGTTATACTT Swoo_2943 3603931 - 3605949 + | NADH:flavin oxidoreductase/NADH oxidase TERM 3650 3606018 - 3605988 - T 74 -7.7 -3.94746 | gap 1, overlap 3605989 3605991 3606009 TTATATTGAATTAAA TGAGCCGTTAGCTA AAAA TAG-TAACGGCTCG CTAACTGCCACTGCT TERM 3651 3606017 - 3605989 - T 79 -11.2 -2.96366 | gap 1, overlap 3605988 3605991 3606009 TATATTGAATTAAAT GAGCCGTTAGCTA AAAA TAG-TAACGGCTC GCTAACTGCCACTGC Swoo_2944 3607225 - 3605999 - | hypothetical protein Swoo_2945 3609648 - 3607312 - | diguanylate cyclase/phosphodiesterase TERM 3652 3608119 - 3608131 + g 76 -2.7 -5.31519 | TTGAGTGTAGATCTG TTGAT CCA ATCGA TTTTTCTTTGCATGT Swoo_2946 3610319 - 3609648 - | hypothetical protein TERM 3653 3610147 - 3610170 + g 83 -7.4 -4.74103 | overlap 3610149 GGGGGAGTAACTTTG TTGCCAACGG TATG CTGTTGGCTA TTTTTAGCTTCAAGG TERM 3654 3610149 - 3610168 + g 82 -10 -3.98859 | overlap 3610147 GGGAGTAACTTTGTT GCCAACGG TATG CTGTTGGC TATTTTTAGCTTCAA TERM 3655 3610754 - 3610771 + r 82 -8.5 -4.35524 | opp_overlap 3610754 ATAGGCAAAAAAAAA GCAAAAC CAAG GTTTTGC TTTTCAGTTTCCAAC TERM 3656 3610771 - 3610754 - R 100 -8.5 -6.13 | opp_overlap 3610754 ATAGGCAAAAAAAAA GCAAAAC CAAG GTTTTGC TTTTCAGTTTCCAAC TERM 3657 3610818 - 3610795 - R 82 -4.7 -5.47159 | opp_overlap 3610795 3610808 TTCCAACAGAAAAAA TTAACTCAA GGTGTA TTGAGTCAA TATCTTATCCAGCTC Swoo_2947 3612243 - 3610795 - | methyl-accepting chemotaxis sensory transducer Swoo_2948 3612853 - 3612341 - | hypothetical protein TERM 3658 3613115 - 3613096 - R 89 -7.8 -5.09521 | TTAAGAAAGTAAAAA GGCCTCCC CTTA GGAAGACC AGTTAAGACAAGTTA Swoo_2949 3615433 - 3613184 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Swoo_2950 3615903 - 3615430 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Swoo_2951 3616551 - 3615931 - | isoquinoline 1-oxidoreductase maturation factor Swoo_2952 3617573 - 3616548 - | hypothetical protein TERM 3659 3617224 - 3617199 - G 71 -3.9 -4.84017 | AATTTGGTAGAAAAA CTGACCGCCAT GATA AAGACGCTCAG ACAACTGGTGGAAAT TERM 3660 3618731 - 3618711 - g 71 -9.7 -3.01712 | GTTGGGGTTGGAATA CGGTTGAGC AAG GCTCAAGCG GCAATGAATGTAGCA Swoo_2953 3617861 - 3620182 + | peptidase M14 carboxypeptidase A Swoo_2954 3620894 - 3620250 - | beta-lactamase domain-containing protein TERM 3661 3622053 - 3622078 + G 74 -3.3 -5.03145 | gap 1, overlap 3622048 3622054 3622058 GCAAACCTTTCCTCT TCACTGGAGAGA TGG TCTATCC-GTGG TTTTTTGAGCAGTTC Swoo_2955 3621086 - 3622381 + | alpha/beta hydrolase fold Swoo_2956 3622790 - 3622446 - | hypothetical protein Swoo_2957 3623233 - 3622913 - | hypothetical protein TERM 3662 3624081 - 3624071 - R 71 -8.2 -3.53563 | opp_overlap 3624080 AGATGCTGCCGTAAA GCCC ACA GGGC AGAAAATGTTCCAGA Swoo_2958 3625874 - 3624897 - | hypothetical protein TERM 3663 3625152 - 3625164 + g 70 -6.3 -4.2528 | TAACTCTAGGTAATC CTTCA GTG TGAAG TTTATTCCCTTGGGC TERM 3664 3627729 - 3627741 + G 74 -2 -5.1861 | opp_overlap 3627729 ATTGGCACAAAAATC TTCT GAAAA AGAA TTTTTTAGTGGTGAA TERM 3665 3628433 - 3628420 - g 73 -4.5 -4.8543 | GAAGCGGTAGAAAAA GCCAA AGAG TCGGC CGAACTTCAGCGTGA Swoo_2959 3626284 - 3629097 + | helicase domain-containing protein TERM 3666 3629358 - 3629372 + T 72 -5.7 -4.58466 | opp_overlap 3629358, overlap 3629350 GCTCTGCCGGGGAAA GACAC ATTGC GTGTC TTTTGTCGTTATACC Swoo_2960 3630195 - 3629392 - | hypothetical protein TERM 3667 3630442 - 3630425 - H 82 -8.5 -4.25104 | CTCTCGGGATGAAAA TAGCGAT AGGT ATCGCTA TCAAGCCAAGCTTTG Swoo_2963 3630860 - 3631327 + | hypothetical protein Swoo_2964 3631422 - 3631685 + | hypothetical protein Swoo_2965 3632016 - 3632288 + | hypothetical protein TERM 3668 3632910 - 3632894 - T 81 -9.5 -3.93398 | AGCGATAGATAACAA TGAAGGT ACA ACCTTCA AACACAACACCAATT TERM 3669 3632986 - 3632956 - T 71 -4.1 -5.011 | gap 1, overlap 3632951 3632948 3632961 AGCTAAACAAGAAAA TGTAATCAGCCTTC ATTC GAAGGCTAACC-CA TTTTGTTATTCACCT TERM 3670 3632982 - 3632961 - T 77 -9.5 -3.48144 | overlap 3632956 3632951 3632948 AACAAGAAAATGTAA TCAGCCTTC ATTC GAAGGCTAA CCCATTTTGTTATTC Swoo_2966 3633912 - 3632992 - | LysR family transcriptional regulator TERM 3671 3633039 - 3633050 + g 71 -4.4 -4.59773 | opp_overlap 3633039 TCAATAAAAAATCAA CCAA AGCT TTGG TTTTTGCAGGTAAAA TERM 3672 3633944 - 3633924 - H 72 -6.9 -3.9398 | opp_overlap 3633924 CCATAAGCCTACAAA TTGATTCCA TAA TGGAAACAA TATAGTGCGTATTTG Swoo_2967 3634033 - 3634974 + | alcohol dehydrogenase TERM 3673 3635279 - 3635296 + G 74 -5.5 -4.64766 | opp_overlap 3635276 TTGAAATAGTAACGC CAACGGG CAAG CCAGTTG TTTTTGAGATGTGGG Swoo_2968 3634993 - 3635865 + | ThiJ/PfpI domain-containing protein Swoo_2969 3636507 - 3636052 - | hypothetical protein TERM 3674 3636325 - 3636311 - G 80 -10 -3.81062 | opp_overlap 3636306, overlap 3636304 3636305 ATCAAAAACGCCAAA GGTGAC ACT GTCACC ATGAGTATAATCCCT Swoo_2970 3637340 - 3636531 - | regulatory protein RecX Swoo_2971 3638400 - 3637408 - | AraC family transcriptional regulator Swoo_2972 3638738 - 3639814 + | hypothetical protein TERM 3675 3639871 - 3639846 - T 76 -9.1 -3.86244 | opp_overlap 3639851, overlap 3639851 CCATAAGAAGAAACA CAAAAGCCTTC ATTC GAAGGCTTTTT TCACTATTTTATAAA TERM 3676 3639866 - 3639851 - T 91 -9 -4.91194 | opp_overlap 3639851, overlap 3639846 AGAAGAAACACAAAA GCCTTC ATTC GAAGGC TTTTTTCACTATTTT TERM 3677 3639851 - 3639866 + T 100 -9 -5.19916 | opp_overlap 3639851 3639846 AGAAGAAACACAAAA GCCTTC ATTC GAAGGC TTTTTTCACTATTTT Swoo_2973 3640210 - 3639875 - | hypothetical protein Swoo_2974 3641031 - 3640486 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3678 3640614 - 3640627 + g 71 -5.2 -4.56597 | GATAGTAATAACGTG GCGC TTTCAT GCGC TTTTTCCCACCAGCC Swoo_2975 3641166 - 3642062 + | LysR family transcriptional regulator Swoo_2976 3644112 - 3642112 - | DNA topoisomerase III TERM 3679 3643626 - 3643607 - G 77 -10 -3.44325 | AGCCCGTATAACCAA TCAGCCCG TGAG CGGGCTAA AGCAGAGGTGGATAG Swoo_2977 3644272 - 3644538 + | hypothetical protein Swoo_2978 3645821 - 3644712 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 3680 3648594 - 3648580 - g 73 -4.3 -4.76312 | TACAAGATGCAAAAA TGAAG AACAA CTTCA TGCCTATTGAAAACC TERM 3681 3649040 - 3649019 - g 74 -3.7 -4.9181 | opp_overlap 3649020, overlap 3649020 AGATAACAGCAAAAA CTCTAACTC AAAT GAAATAGAG TTAGATTTAACAGGT Swoo_2979 3646083 - 3650105 + | multi-sensor hybrid histidine kinase TERM 3682 3650111 - 3650138 + T 84 -11.4 -3.24925 | opp_overlap 3650116, overlap 3650116 CAATAGCTAGAAATG AAAAACCGACCT GTGA AGGTCGGTTTTC TTAATGCTGTGACAT TERM 3683 3650116 - 3650133 + T 91 -11.3 -4.74215 | opp_overlap 3650116, overlap 3650111 GCTAGAAATGAAAAA CCGACCT GTGA AGGTCGG TTTTCTTAATGCTGT TERM 3684 3650133 - 3650116 - T 93 -11.3 -5.04601 | opp_overlap 3650111 3650116 GCTAGAAATGAAAAA CCGACCT GTGA AGGTCGG TTTTCTTAATGCTGT Swoo_2980 3651701 - 3650187 - | amidophosphoribosyltransferase TERM 3685 3650404 - 3650386 - G 73 -10.4 -3.01791 | ACGGCTTCTGCAAGA TCTTCCAA ATC TTGGAAGA TCATCCCATCGGCGC Swoo_2981 3652292 - 3651804 - | colicin V production protein TERM 3686 3651965 - 3651949 - G 88 -10.9 -4.20024 | overlap 3651944 3651959 3651962 ATAAAAAAGAGTAAA GCACTGA CAA TCAGTGC GCCTCTTAAGGCGCC TERM 3687 3652386 - 3652374 - R 70 -6.3 -4.23892 | CTTAATGATGCAAAA GATTG TTT CAATC TCTGACCACAGTTTT Swoo_2982 3653026 - 3652421 - | sporulation domain-containing protein TERM 3688 3652747 - 3652768 + g 71 -3.7 -4.76041 | gap 1, overlap 3652749 TGGCCACCTCAGTTG AAGGCTGTTG AGC CAAC-GCCTC TTTTTCCTCAATCTC TERM 3689 3652810 - 3652831 + g 78 -6.5 -4.66609 | overlap 3652812 GATCTAACTCGTCGG CAGCAGGCT CAAA GGCCTGCTC TTTTTCACTCAGGTC TERM 3690 3652812 - 3652829 + g 79 -9.1 -3.94812 | overlap 3652810 TCTAACTCGTCGGCA GCAGGCT CAAA GGCCTGC TCTTTTTCACTCAGG Swoo_2983 3654320 - 3653055 - | FolC bifunctional protein TERM 3691 3653467 - 3653477 + g 77 -2.4 -5.35354 | CCCTCTAAACGAGCA GACC CTA GGGC TTTTTTGATTATCTC Swoo_2984 3655170 - 3654385 - | tRNA pseudouridine synthase A TERM 3692 3655463 - 3655480 + r 100 -12.7 -3.91897 | opp_overlap 3655463 AAATAGATAAAGAAA TGGCGCC AACT GGCGCCA TTTATCAGTAAACAA TERM 3693 3655480 - 3655463 - R 100 -12.7 -4.69487 | opp_overlap 3655463 AAATAGATAAAGAAA TGGCGCC AACT GGCGCCA TTTATCAGTAAACAA Swoo_2985 3658912 - 3655505 - | hypothetical protein TERM 3694 3657192 - 3657208 + g 71 -9.4 -3.11072 | TCATCTTCTGTATCT GCAGCC AATTG GGCTGC TATCTCTTCACTCAG TERM 3695 3658323 - 3658337 + g 74 -3.5 -5.09762 | overlap 3658324 GCTCTCACTAGTTCA TCTGC CAATT GCAGG TTTTTATCTTCGGAT TERM 3696 3658389 - 3658401 + g 90 -9.1 -4.64766 | overlap 3658375 TCACTGTTTTGCACA GCGTC ATT GACGC TTTTTGGGCTCTCGC TERM 3697 3658444 - 3658455 + g 71 -2.2 -5.10461 | overlap 3658437 TAACAGAAGCCGACT CTGG CTGT TCAG TTTTTATTGGCTCAG TERM 3698 3659078 - 3659042 - R 83 -10.3 -3.76749 | opp_overlap 3659052, overlap 3659044 3659052 AAAAACAAGTGCAAA TATAAAAAAAGCCCGCA TAT TGCAGGCTTTTTCAACA AAACAGGCATAAATC TERM 3699 3659076 - 3659044 - R 81 -10.7 -3.44353 | opp_overlap 3659052, overlap 3659042 3659052 AAACAAGTGCAAATA TAAAAAAAGCCCGCA TAT TGCAGGCTTTTTCAA CAAAACAGGCATAAA TERM 3700 3659052 - 3659068 + r 83 -7.9 -4.56597 | opp_overlap 3659052 3659044 3659042 GCAAATATAAAAAAA GCCCGCA TAT TGCAGGC TTTTTCAACAAAACA TERM 3701 3659068 - 3659052 - R 100 -10.1 -5.88197 | opp_overlap 3659052, overlap 3659044 3659042 GCAAATATAAAAAAA GCCCGCA TAT TGCAGGC TTTTTCAACAAAACA Swoo_2986 3660119 - 3659103 - | aspartate-semialdehyde dehydrogenase Swoo_2987 3661285 - 3660122 - | D-isomer specific 2-hydroxyacid dehydrogenase catalytic region TERM 3702 3660818 - 3660828 + g 84 -6.8 -5.08824 | opp_overlap 3660817 3660818 TAACGAAACAAAATT GCGA GGA TCGC TTTTTTCAATCAAGG Swoo_2988 3661782 - 3661345 - | hypothetical protein TERM 3703 3663180 - 3663168 - g 76 -2.7 -5.27399 | TAATAGAGTAAAAAA CAAAC GAG GTTTA GCCCAGTTATCACAG TERM 3704 3663307 - 3663293 - g 73 -5 -4.67011 | overlap 3663303 AACTTGACGCAAAAA TGCAAT CAA ATCGCA CGACAGAGATGCGAA Swoo_2989 3662131 - 3664017 + | diguanylate cyclase Swoo_2990 3664828 - 3664037 - | extracellular solute-binding protein Swoo_2991 3665047 - 3666243 + | iron-sulfur cluster binding protein TERM 3705 3666271 - 3666246 - T 83 -8.3 -4.46155 | overlap 3666247 CAGAGATGCATAAAA GCGAGTCCCTA GCCT TAGGAACTCGT GGCTCATAGCTAAGC TERM 3706 3666270 - 3666247 - T 84 -11.8 -3.2697 | overlap 3666246 AGAGATGCATAAAAG CGAGTCCCTA GCCT TAGGAACTCG TGGCTCATAGCTAAG Swoo_2992 3666497 - 3666288 - | hypothetical protein Swoo_2993 3667199 - 3669316 + | TonB-dependent receptor TERM 3707 3669717 - 3669703 - g 82 -5 -5.2696 | opp_overlap 3669703, overlap 3669708 CCAAAAGCCAAAAAA TACACC GCA GATGTA CGTTTTTCCTATTCC Swoo_2994 3669310 - 3670560 + | BNR repeat-containing protein Swoo_2995 3670557 - 3671036 + | hypothetical protein TERM 3708 3672649 - 3672639 - g 77 -6.8 -4.45168 | GCCGCAAAAGATAAA GGTG TAA CACC GGCTGGAGGTACTGG Swoo_2996 3671166 - 3672713 + | leucyl aminopeptidase TERM 3709 3672827 - 3672805 - T 100 -9.1 -6.02546 | TTAAACGAAAAAAAA CCCGCTCTA GAAGG TTGAGCGGG TAAAGAGTAGTGTTA Swoo_2997 3673829 - 3673077 - | LuxR family transcriptional regulator Swoo_2998 3674215 - 3674892 + | N-acyl-L-homoserine lactone synthetase-like protein Swoo_2999 3676622 - 3674937 - | gluconate 2-dehydrogenase (acceptor) Swoo_3000 3677276 - 3676641 - | hypothetical protein Swoo_3001 3677860 - 3677270 - | redoxin domain-containing protein Swoo_3002 3678112 - 3678498 + | hypothetical protein TERM 3710 3678609 - 3678587 - T 100 -12.8 -5.20534 | AGCAAGTAACAAAAA GGCTGATACC ATA AGTATCAGCC TTCAACCGTCAGTTT Swoo_3003 3679177 - 3678644 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Swoo_3004 3679970 - 3679179 - | DSBA oxidoreductase TERM 3711 3679675 - 3679699 + g 79 -11.5 -3.02263 | overlap 3679663 CAGGGATCTGTTTTG GTCTCAAACAG GGC CTGTTTGTGAC TGTTCAAGGCGCTCT Swoo_3005 3682162 - 3680111 - | cytochrome c biogenesis protein transmembrane region Swoo_3006 3682732 - 3682340 - | hypothetical protein TERM 3712 3682559 - 3682542 - G 70 -5.5 -4.35524 | overlap 3682543 GTTTTAAACTCAAAA TGGCTCA GATC TGAGCCT ACCTCTGAGGTGCTA TERM 3713 3682558 - 3682543 - G 70 -9 -3.20832 | overlap 3682542 TTTTAAACTCAAAAT GGCTCA GATC TGAGCC TACCTCTGAGGTGCT TERM 3714 3683905 - 3683886 - g 73 -5 -4.62471 | gap 1 GGCAAGGGGCAAAAA CAGGC-ACC GGT GGTCACCTG CCAGGCGTCAAGAAC Swoo_3007 3683093 - 3684643 + | ferredoxin-dependent glutamate synthase TERM 3715 3684662 - 3684689 + T 83 -11.4 -3.17901 | opp_overlap 3684668, overlap 3684668 CTTTCACCATTTAAC GAAAAAGGGAGC CTAA GCTCCCTTTTTA TTACATTAGCGATGT TERM 3716 3684668 - 3684683 + T 93 -10.4 -5.13741 | opp_overlap 3684668, overlap 3684662 CCATTTAACGAAAAA GGGAGC CTAA GCTCCC TTTTTATTACATTAG TERM 3717 3684683 - 3684668 - T 93 -10.4 -4.88407 | opp_overlap 3684668 3684662 CCATTTAACGAAAAA GGGAGC CTAA GCTCCC TTTTTATTACATTAG Swoo_3008 3685948 - 3684737 - | Beta-ketoacyl synthase Swoo_3009 3686060 - 3688150 + | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TERM 3718 3688135 - 3688145 + T 75 -8.2 -3.73386 | opp_overlap 3688135 GCGTAAACTCATCAA GGGC AAA GCCC TTTAACTCCTTCTAT TERM 3719 3688145 - 3688135 - T 70 -8.2 -3.25088 | opp_overlap 3688135 GCGTAAACTCATCAA GGGC AAA GCCC TTTAACTCCTTCTAT TERM 3720 3688160 - 3688194 + T 100 -16.1 -4.70583 | opp_overlap 3688166 CTTTAACTCCTTCTA TGTAAACTCGTTTTA TCGAT TAAAACGAGTTTACA TTTTCTGTTGATGAA TERM 3721 3688188 - 3688166 - T 78 -9.3 -3.64703 | opp_overlap 3688160 CTCCTTCTATGTAAA CTCGTTTTA TCGAT TAAAACGAG TTTACATTTTCTGTT Swoo_3010 3689441 - 3688179 - | histidine kinase A domain-containing protein TERM 3722 3688449 - 3688487 + g 80 -8.9 -4.0371 | gap 1 CACGGCGATAAAGCT CTCAGGCGCA-TGGGCCT TGCT AGGCTCACTGACCCTGAG TTTATATCCGGCATC Swoo_3011 3690144 - 3689476 - | two component transcriptional regulator Swoo_3012 3690237 - 3691550 + | lipoprotein TERM 3723 3691576 - 3691618 + T 100 -18.9 -3.07895 | gap 1, opp_overlap 3691586 3691590, overlap 3691586 TAGAGAAGCTTACGC CAGATAAAAAGAAACCCAGC AGTT GCTGGGTTTCTTTTTAT-TG TCTGTTAACAATCGA TERM 3724 3691609 - 3691586 - T 100 -15.4 -4.9792 | opp_overlap 3691586 3691576, overlap 3691590 TACGCCAGATAAAAA GAAACCCAGC AGTT GCTGGGTTTC TTTTTATTGTCTGTT TERM 3725 3691586 - 3691609 + T 100 -15.4 -5.28561 | opp_overlap 3691586 3691590, overlap 3691576 TACGCCAGATAAAAA GAAACCCAGC AGTT GCTGGGTTTC TTTTTATTGTCTGTT TERM 3726 3691605 - 3691590 - T 93 -10.4 -5.01422 | opp_overlap 3691586 3691576, overlap 3691586 CCAGATAAAAAGAAA CCCAGC AGTT GCTGGG TTTCTTTTTATTGTC Swoo_3013 3692213 - 3691680 - | tRNA/rRNA methyltransferase (SpoU) Swoo_3014 3692479 - 3692210 - | YfcL protein Swoo_3015 3693685 - 3692561 - | ATP-NAD/AcoX kinase Swoo_3016 3694885 - 3693716 - | major facilitator transporter TERM 3727 3694043 - 3694032 - G 81 -2.2 -5.60993 | CTTTCGACAAAAAAA GCCA TAAG TAGC CAGCGAACAGCGGTA TERM 3728 3694228 - 3694218 - G 100 -5.4 -5.9218 | TACAGAACAAAAAAA CCAT AAA ATGG GCCAGCACTCATCTG TERM 3729 3694293 - 3694274 - G 71 -4.3 -4.64383 | AAGCAGAAACCAAAA TAGCGCT TTATCT AGCACTA ACTTAGGGGTTTCAG TERM 3730 3694422 - 3694399 - G 73 -6 -4.34267 | gap 1, overlap 3694401 CCACATAAGGTAAAA CT-TCAGTGCC CCA GGCGCTGATAG CAAAACCAACCCCCA TERM 3731 3694627 - 3694614 - G 74 -6.7 -4.38927 | overlap 3694618 CCGTTATAGAAGAAA GTGAG GTAA CTCAC CGCAGCAGCTGCGGC TERM 3732 3694641 - 3694627 - G 77 -11.4 -2.55392 | overlap 3694618 AAGTGAGGTAACTCA CCGCAG CAG CTGCGG CCCCCCACTTTACCA TERM 3733 3694802 - 3694784 - G 75 -4.5 -5.00884 | overlap 3694787 ACGGTTTTCAAAAAA GACGCCA AGGTA TGGCACC ATCACGCCTAAAATG TERM 3734 3694987 - 3695001 + r 83 -8.5 -4.42653 | opp_overlap 3694987 AAAGACAGTAAAAAA GGCGC CTAAA GCGCC TTTTCTCAATCAACT TERM 3735 3695001 - 3694987 - R 100 -9.2 -5.28755 | opp_overlap 3694987 AAAGACAGTAAAAAA GGCGCC TAA AGCGCC TTTTCTCAATCAACT Swoo_3017 3696109 - 3695015 - | chorismate synthase TERM 3736 3696224 - 3696205 - R 100 -7.9 -5.3671 | opp_overlap 3696205, overlap 3696194 AACAGAATTAAAAAA GGCTAAC TTATTC GTTAGCC TTTTTTATCACCAGT TERM 3737 3696205 - 3696224 + r 100 -7.9 -5.24531 | opp_overlap 3696194 3696205 AACAGAATTAAAAAA GGCTAAC TTATTC GTTAGCC TTTTTTATCACCAGT Swoo_3018 3697201 - 3696257 - | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific Swoo_3019 3697331 - 3697855 + | Smr protein/MutS2 Swoo_3020 3698486 - 3697974 - | phosphohistidine phosphatase, SixA TERM 3738 3698801 - 3698819 + G 70 -6.6 -4.12456 | AAGCTGCCGCCTCTA TGGCTGTC AAT GTCGGCCA TTTTGACGATCCTGT TERM 3739 3698905 - 3698919 + G 72 -7 -4.24342 | AAGTTTCCAGACTCA GGCGAG TAC CACGCC TTTATTAATCAGCAC TERM 3740 3700689 - 3700679 - g 76 -4 -5.14563 | opp_overlap 3700671 GTTTTTATGAAAAAA TTCA TCT TGAA GGTTTAGTTTATGGC TERM 3741 3700937 - 3700947 + G 80 -5.4 -5.15634 | opp_overlap 3700937 TATTAAACCACACTA TGTC ATC GACA TTTTTTCATGAGCTA TERM 3742 3700985 - 3700975 - g 81 -3.2 -5.37865 | CTAAGAACCAAAAAA CAGC TTG GCTA TATGGTAGGAACTGG Swoo_3021 3698674 - 3701463 + | peptidase M16 domain-containing protein TERM 3743 3702804 - 3702782 - g 79 -2.8 -5.36018 | AGGAAAAAAAACAAA CTATATTACA ACT CATAACATAG GATTATTAGTTAATT TERM 3744 3703429 - 3703417 - g 100 -2 -6.20267 | GCAAAAACAAAAAAA TAGA AACTA TCTA CTCAAACAATAGGCC TERM 3745 3704515 - 3704504 - g 71 -4.4 -4.70626 | opp_overlap 3704510 TAATAACTTTAAAAA TGCT GAGG AGCA ACTTCGTCTGTTTGA Swoo_3022 3701871 - 3706196 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3746 3706324 - 3706297 - f 74 -7.8 -3.88787 | opp_overlap 3706298 3706304, overlap 3706298 TGACAGCCTTATAAA TTCGAAACCATC GCTT GATGGTTTCAAT AACTTGAGAGAAGAA TERM 3747 3706323 - 3706298 - f 79 -11.3 -2.92951 | opp_overlap 3706298 3706304, overlap 3706297 GACAGCCTTATAAAT TCGAAACCATC GCTT GATGGTTTCAA TAACTTGAGAGAAGA Swoo_3023 3706344 - 3706796 + | hypothetical protein Swoo_3024 3706814 - 3706933 + | hypothetical protein TERM 3748 3706991 - 3707007 + T 100 -12.3 -5.66684 | opp_overlap 3706991 AATTAAAGATGGAAA TGGAGCC TAC GGCTCCA TTTTTTTATCAATTA TERM 3749 3707007 - 3706991 - T 90 -12.3 -3.82811 | opp_overlap 3706991 AATTAAAGATGGAAA TGGAGCC TAC GGCTCCA TTTTTTTATCAATTA Swoo_3025 3707252 - 3707046 - | hypothetical protein TERM 3750 3707423 - 3707440 + r 79 -11.3 -2.9587 | opp_overlap 3707423, overlap 3707420 CTTACGCATAAAAAA GCGGCAA ACTA TTGCCGC TACTTTAGAGTTTAA TERM 3751 3707440 - 3707423 - R 100 -11.3 -5.28176 | opp_overlap 3707423 3707420 CTTACGCATAAAAAA GCGGCAA ACTA TTGCCGC TACTTTAGAGTTTAA Swoo_3026 3709642 - 3707501 - | fatty acid oxidation complex, alpha subunit FadJ TERM 3752 3708226 - 3708213 - G 70 -6.7 -4.11216 | TGTTTACGTGCAAAA GCAAC TGTC GTTGC AATCGTTTCGGCAGA Swoo_3027 3710959 - 3709649 - | acetyl-CoA C-acyltransferase FadI TERM 3753 3710136 - 3710116 - G 75 -8.3 -3.71998 | opp_overlap 3710116 3710128 CACTCATCAATAGAA TGGCAGATG CGC CATCTGTCA AAGGTGTACTTGTCG Swoo_3028 3711382 - 3712338 + | ATPase Swoo_3029 3712339 - 3713268 + | hypothetical protein Swoo_3030 3713268 - 3713795 + | hypothetical protein TERM 3754 3713867 - 3713855 - g 76 -6.3 -4.55697 | ATCTTCAGAAAGAAA CAACA AGA TGTTG AGATAAGTGGCCACT Swoo_3031 3713789 - 3714781 + | von Willebrand factor type A TERM 3755 3716618 - 3716634 + G 70 -9.3 -3.19642 | opp_overlap 3716602 3716615, overlap 3716619 TACCACCAGAGATGG AGCGCGC AAT GCGCGCC TTAGTCGATGATCCT TERM 3756 3716619 - 3716633 + G 81 -12.8 -2.51464 | opp_overlap 3716615, overlap 3716618 ACCACCAGAGATGGA GCGCGC AAT GCGCGC CTTAGTCGATGATCC Swoo_3032 3714784 - 3716736 + | TPR repeat-containing protein TERM 3757 3718236 - 3718246 + G 86 -2.4 -5.67063 | CAGGGAAAGTACTTT CAGC TCT GCAG TTTTTTTGTAGTAAA Swoo_3033 3716819 - 3718465 + | hypothetical protein TERM 3758 3718520 - 3718480 - f 83 -11.4 -3.11584 | opp_overlap 3718483, overlap 3718483 ATACCACCCAACATA CAAGTGCAAGAGGTTAAC TTAAG ATTAACTTCTTGCACTTA ATCTTCATAAGGTTA TERM 3759 3718483 - 3718517 + F 90 -12.4 -3.39449 | opp_overlap 3718483 3718480 CCACCCAACATACAA GTGCAAGAGGTTAA CTTAAGA TTAACTTCTTGCAC TTAATCTTCATAAGG TERM 3760 3718517 - 3718483 - f 83 -10.9 -3.69482 | opp_overlap 3718483, overlap 3718480 CCACCCAACATACAA GTGCAAGAGGTTAAC TTAAG ATTAACTTCTTGCAC TTAATCTTCATAAGG Swoo_3034 3718571 - 3719146 + | ECF subfamily RNA polymerase sigma-24 factor Swoo_3035 3719139 - 3719843 + | hypothetical protein TERM 3761 3719873 - 3719853 - f 80 -11.2 -3.0644 | opp_overlap 3719853, overlap 3719844 ATCTAATTTTGAAGA CCTGTCTC CCTCC GAGACAGG TCTTACCATCTATAC TERM 3762 3719853 - 3719873 + F 80 -11.2 -3.08934 | opp_overlap 3719853 3719844 ATCTAATTTTGAAGA CCTGTCTC CCTCC GAGACAGG TCTTACCATCTATAC Swoo_3036 3720228 - 3721694 + | sodium/proline symporter TERM 3763 3721730 - 3721705 - f 86 -7.7 -4.93696 | gap 1, opp_overlap 3721706 3721707, overlap 3721707 3721720 TTTAAATAGTAAAAA TAGGGGTTTGAA AGA CTCAAACCCC-A TTTAAGCTTACAACT TERM 3764 3721706 - 3721730 + F 74 -8.6 -3.66356 | opp_overlap 3721705 3721707 3721720, overlap 3721707 TTAAATAGTAAAAAT AGGGGTTTGA AAGAC TCAAACCCCA TTTAAGCTTACAACT TERM 3765 3721729 - 3721707 - f 100 -12.8 -4.07993 | opp_overlap 3721706 3721707, overlap 3721705 3721720 TAAATAGTAAAAATA GGGGTTTGAA AGA CTCAAACCCC ATTTAAGCTTACAAC TERM 3766 3721707 - 3721729 + F 86 -12.1 -2.79492 | opp_overlap 3721707 3721705 3721720, overlap 3721706 TAAATAGTAAAAATA GGGGTTTGA AAGAC TCAAACCCC ATTTAAGCTTACAAC TERM 3767 3723013 - 3723000 - g 71 -8.1 -3.76224 | opp_overlap 3723008 TGGTCAGCTAGCAAA CGGCA CCGC TGCCG GTGATGCAGTACTTA Swoo_3037 3722053 - 3723378 + | membrane protein involved in aromatic hydrocarbon degradation TERM 3768 3723401 - 3723418 + F 100 -12.7 -5.31456 | opp_overlap 3723401 AGCCCATTGAATAAA GCCGCAC TCTT GTGCGGC TTTTTTGTGCATTGC TERM 3769 3723418 - 3723401 - f 100 -12.7 -4.20783 | opp_overlap 3723401 AGCCCATTGAATAAA GCCGCAC TCTT GTGCGGC TTTTTTGTGCATTGC Swoo_3038 3723485 - 3723871 + | hypothetical protein Swoo_3039 3723953 - 3724669 + | hypothetical protein Swoo_3040 3724882 - 3725268 + | rhodanese domain-containing protein TERM 3770 3725338 - 3725288 - f 83 -7.9 -4.63218 | gap 2, opp_overlap 3725304, overlap 3725290 3725292 3725293 3725295 TTTTTGTTAAGAAAA GATAGCATGGTTAATAGCCAGCC CAACTGT GGCTGGCTATTAAC-ACG-TAAC TACAATGACCTGATC TERM 3771 3725336 - 3725290 - f 79 -9.1 -3.93367 | gap 2, opp_overlap 3725304, overlap 3725288 3725292 3725293 3725295 TTTGTTAAGAAAAGA TAGCATGGTTAATAGCCAGCC CAACTGT GGCTGGCTATTAAC-ACG-TA ACTACAATGACCTGA TERM 3772 3725335 - 3725292 - f 80 -9.8 -3.55261 | gap 1, opp_overlap 3725304, overlap 3725290 3725288 3725293 3725295 TGTTAAGAAAAGATA GCATGGTTAATAGCCAGCC CAACTGT GGCTGGCTATTAAC-ACGT AACTACAATGACCTG TERM 3773 3725334 - 3725293 - f 91 -13.3 -2.72434 | gap 1, opp_overlap 3725304, overlap 3725292 3725290 3725288 3725295 GTTAAGAAAAGATAG CATGGTTAATAGCCAGCC CAACTGT GGCTGGCTATTAAC-ACG TAACTACAATGACCT TERM 3774 3725332 - 3725295 - f 87 -12.3 -2.89379 | gap 1, opp_overlap 3725304, overlap 3725293 3725292 3725290 3725288 TAAGAAAAGATAGCA TGGTTAATAGCCAGCC CAACTGT GGCTGGCTATTAAC-A CGTAACTACAATGAC TERM 3775 3725304 - 3725324 + F 75 -9.7 -3.03243 | opp_overlap 3725295 3725293 3725292 3725290 3725288 ATAGCATGGTTAATA GCCAGCC CAACTGT GGCTGGC TATTAACACGTAACT TERM 3776 3726745 - 3726762 + G 77 -9.9 -3.64912 | ACACCCATAGCTACC CAGCATC CTAT GATGCTG TTATGTCTGTCGCTG Swoo_3041 3725835 - 3728258 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 3777 3728328 - 3728301 - f 79 -6.2 -4.86293 | opp_overlap 3728306, overlap 3728306 TAACAAAAAGTAAAA TTAAAGAGGGCG TTTA CGCCCTCTTCTT TATCCCCCGCAAGAT TERM 3778 3728323 - 3728306 - f 100 -12.7 -4.30827 | opp_overlap 3728306, overlap 3728301 AAAAGTAAAATTAAA GAGGGCG TTTA CGCCCTC TTCTTTATCCCCCGC TERM 3779 3728306 - 3728323 + F 100 -12.7 -4.06419 | opp_overlap 3728306 3728301 AAAAGTAAAATTAAA GAGGGCG TTTA CGCCCTC TTCTTTATCCCCCGC Swoo_3042 3728387 - 3728746 + | hypothetical protein TERM 3780 3728772 - 3728796 + T 100 -14.4 -5.22794 | opp_overlap 3728772 GATTGATCTTAAAAA GGCTGCAAGT GATAA ACTTGCAGCC TTTTTTAATGCTTAT TERM 3781 3728796 - 3728772 - T 100 -14.4 -4.62783 | opp_overlap 3728772 GATTGATCTTAAAAA GGCTGCAAGT GATAA ACTTGCAGCC TTTTTTAATGCTTAT Swoo_3043 3729342 - 3728830 - | malate synthase TERM 3782 3729103 - 3729085 - G 70 -6 -4.21319 | overlap 3729089 ATTAAGGGCAACAAA TTGACGTG GGT CACGTAAA CCGCTGTGAGTACCA TERM 3783 3730335 - 3730321 - g 79 -11.4 -3.02043 | opp_overlap 3730320, overlap 3730308 AAGCGCCTCCGAAGA GCTGGG AAC CCCAGC CTCTTCAACGGTCAA Swoo_3044 3729536 - 3731077 + | XRE family transcriptional regulator Swoo_3045 3732072 - 3731254 - | hypothetical protein TERM 3784 3731376 - 3731366 - G 77 -6.8 -4.56775 | opp_overlap 3731372, overlap 3731352 ATCGGCTTTGAAAAA GCCA GTG TGGC TCCTACTTCTAAGCT TERM 3785 3731687 - 3731698 + g 74 -5.8 -4.64766 | ATGGCAACATGGTCC CCTG AATT CAGG TTTTTGCCATATCCA Swoo_3046 3732758 - 3732141 - | GTP cyclohydrolase II TERM 3786 3732220 - 3732231 + g 71 -4.4 -4.59853 | GTCTTCAGATAAGCT TCGT TATA ACGA TTTTTACCAACTTGC Swoo_3047 3733408 - 3733052 - | hypothetical protein TERM 3787 3733456 - 3733443 - R 81 -6.7 -4.89729 | opp_overlap 3733443 3733438 TATAAAATGCAAAAA CAGCT AAAA AGCTG TTTTATAATATTCGA TERM 3788 3733443 - 3733456 + r 77 -6.7 -4.55023 | opp_overlap 3733443, overlap 3733438 TATAAAATGCAAAAA CAGCT AAAA AGCTG TTTTATAATATTCGA Swoo_3048 3734067 - 3733597 - | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 3789 3733850 - 3733839 - G 74 -5.8 -4.72986 | GATTCCCAGGAAAAA GTGG ATCG CCAC CAGATAGAGATAAGC Swoo_3049 3736395 - 3734278 - | anaerobic ribonucleoside-triphosphate reductase TERM 3790 3735318 - 3735333 + g 80 -9 -4.0896 | opp_overlap 3735318 GAATATCTGGATACA TGCGCA TGGT TGCGCA TTTTAACGCCAGTTT Swoo_3050 3737434 - 3736676 - | hypothetical protein Swoo_3051 3737866 - 3737498 - | response regulator receiver protein TERM 3791 3737983 - 3738005 + r 87 -12.1 -3.14132 | opp_overlap 3737983 ATGTTAATGCAAAAA CGCATGAAG AGAGA CTTCATGCG TTCGTAAAAAAGACA TERM 3792 3738005 - 3737983 - R 100 -12.1 -4.74504 | opp_overlap 3737983 ATGTTAATGCAAAAA CGCATGAAG AGAGA CTTCATGCG TTCGTAAAAAAGACA Swoo_3052 3738978 - 3738043 - | patatin TERM 3793 3740333 - 3740318 - g 93 -9 -5.03747 | AAAGCGGGTAAAAAA TCGGCT GCTA AGCCGA AACGAACTAAAGCCT Swoo_3053 3739139 - 3740482 + | DEAD/DEAH box helicase domain-containing protein TERM 3794 3740507 - 3740534 + T 100 -10.6 -5.4505 | opp_overlap 3740507 AGTGAGCATTAAAAA GCCCTATCACAG TAAG TTGCGATAGGGC TTTTTTATTGCGAGC TERM 3795 3740534 - 3740507 - T 100 -12.1 -4.77438 | opp_overlap 3740507 AGTGAGCATTAAAAA GCCCTATCACA GTAAGT TGCGATAGGGC TTTTTTATTGCGAGC Swoo_3054 3741001 - 3740552 - | YHS domain-containing protein TERM 3796 3740757 - 3740725 - G 77 -11.4 -2.69545 | opp_overlap 3740725, overlap 3740724 3740727 3740730 GTGACATAGCATAAG CACAATATCCGCCA TATTG CGGCAGATATTGCG TTGGTTCATCTTCAA TERM 3797 3740755 - 3740727 - G 72 -10.4 -2.88783 | opp_overlap 3740725, overlap 3740725 3740724 3740730 GACATAGCATAAGCA CAATATCCGCCA TATTG CGGCAGATATTG CGTTGGTTCATCTTC TERM 3798 3740971 - 3740959 - G 95 -3.3 -5.63504 | overlap 3740968 AACCCGATAAAAAAA GCAGT AAA ACAGC TAATAGATAGCCGTA TERM 3799 3741263 - 3741281 + G 76 -6.1 -4.56978 | GACTTTTAACGTGCC TGATTGT CGCCA ACAATCA TTTGTTATTTCACAC Swoo_3055 3741180 - 3741626 + | hypothetical protein TERM 3800 3741672 - 3741644 - f 78 -11 -2.65081 | opp_overlap 3741644 3741643, overlap 3741643 3741641 CTAGCTAAAACACAG TGCGAGCCTTGC CCTAT ACTAGGCTCGCA ATTATTATCCTTTAA TERM 3801 3741644 - 3741672 + F 77 -10.3 -2.95207 | opp_overlap 3741643 3741641 3741644, overlap 3741643 CTAGCTAAAACACAG TGCGAGCCTTG CCCTATA CTAGGCTCGCA ATTATTATCCTTTAA TERM 3802 3741775 - 3741755 - g 72 -8.3 -3.70033 | CAGCAAGAGATACAA GATCAGGTT GCA AGCCTGATC AGCAGCAATAAGCTT Swoo_3056 3741710 - 3742219 + | hypothetical protein TERM 3803 3742557 - 3742574 + G 87 -4.9 -5.35721 | gap 1, overlap 3742560 3742561 CTGTTTGGTTACGCC TACTGGCT TGA AGCC-GTA TTTTTATTATTCTAT Swoo_3057 3742314 - 3743483 + | AraC family transcriptional regulator TERM 3804 3743573 - 3743548 - T 76 -9.1 -3.76411 | opp_overlap 3743551, overlap 3743551 GCAAAAGTAGCCAAA GAACTTGCC GTATTGCT GGCAAGTTC GGTAAAGCCACTTGA TERM 3805 3743633 - 3743619 - T 91 -7.1 -5.37345 | TTGAAGCATAAAAAA GGGAG CTAAT CTCCC CGTTAAATCATCTTT Swoo_3058 3746231 - 3743658 - | Beta-glucosidase TERM 3806 3746407 - 3746376 - R 72 -9.6 -2.79248 | opp_overlap 3746405, overlap 3746359 3746373 TCAAACTTAAGATTA TCACCTGAATTTGA ACGT TCAAATTCAGGTAT GCAGACAGTTGAACT TERM 3807 3746509 - 3746538 + r 80 -10.9 -3.06679 | opp_overlap 3746515, overlap 3746515 CTCAACCAATAGACA AAAAAATACCAGC TTTC GCTGGTATTTTTA TTCACTACACATCTT TERM 3808 3746515 - 3746532 + r 93 -9.9 -5.10461 | opp_overlap 3746515, overlap 3746509 CAATAGACAAAAAAA TACCAGC TTTC GCTGGTA TTTTTATTCACTACA TERM 3809 3746532 - 3746515 - R 100 -9.9 -5.80248 | opp_overlap 3746515 3746509 CAATAGACAAAAAAA TACCAGC TTTC GCTGGTA TTTTTATTCACTACA Swoo_3059 3747859 - 3746543 - | peptidase M23B TERM 3810 3748130 - 3748085 - R 84 -10.8 -3.71991 | gap 1 CACAAATGCCAATAA TCTCTACAAGCTCAGATTG CATAGACAC CAATCTGAGCTTA-AGAGA AGTGACAATTAGGGC Swoo_3060 3751195 - 3748139 - | SMC domain-containing protein TERM 3811 3751150 - 3751134 - G 71 -4.4 -4.62471 | overlap 3751138 CCCAATGCTGAAAAA TCGACC TCTTG AGTCGA GGCAAAGGGACCGAA Swoo_3061 3752337 - 3751192 - | nuclease SbcCD, D subunit Swoo_3062 3753445 - 3752720 - | hypothetical protein TERM 3812 3752973 - 3753001 + g 74 -8.1 -4.05816 | overlap 3752978 GCCAGCTCAATCCCT GCAAGCGCCTTTC TTC GATAGTCGTTTGC TTTATCATAATTTTC Swoo_3063 3753777 - 3755039 + | aminotransferase class I and II TERM 3813 3755475 - 3755485 + T 75 -8.2 -3.84246 | TGAAGCCATCCTTGG CCGC TCT GCGG TTTCATCCTTGAAAC TERM 3814 3755732 - 3755747 + T 72 -4.7 -4.77036 | TCTTGCTTACGCCAA GGCTA AGCTGG TAGCC TTTTTGGTACTCAAA Swoo_3064 3756689 - 3755712 - | hypothetical protein TERM 3815 3757417 - 3757401 - R 82 -8.1 -4.23999 | overlap 3757398 3757408 CTATAGCCAAAACAA CAAATCA TAC TGATTTG ACAGTAACTTAACGC Swoo_3065 3758165 - 3757386 - | hypothetical protein TERM 3816 3758268 - 3758254 - H 74 -8.6 -3.60296 | opp_overlap 3758242 TATTCTCATTTTAAA GTGAGA TTT TCTCAC GCATGGAATATAAAT Swoo_3066 3758304 - 3759194 + | LysR family transcriptional regulator TERM 3817 3759228 - 3759246 + T 73 -8.1 -3.67052 | opp_overlap 3759228 TGTCATCACAAAAAA GGAGGCT CAAAT GGCCTCC TTCTATTGCACGTCT TERM 3818 3759246 - 3759228 - T 91 -7.4 -5.31275 | opp_overlap 3759228 TGTCATCACAAAAAA GGAGGC TCAAATG GCCTCC TTCTATTGCACGTCT Swoo_3067 3761245 - 3759275 - | serine/threonine protein kinase TERM 3819 3761324 - 3761308 - R 100 -8.7 -5.65177 | opp_overlap 3761308 ACAGGCATAAAAAAA GCCACTA AAA TAGCGGC TTAATACAAAATATC Swoo_3068 3761804 - 3761418 - | hypothetical protein TERM 3820 3761765 - 3761781 + g 71 -8.7 -3.45849 | CAGCTTCACTCATTG CGGCAAG CAT TTTGCCG TTATCATCATCTGGA Swoo_3069 3762063 - 3761830 - | RNA-binding S4 domain-containing protein TERM 3821 3761974 - 3761991 + g 71 -4.9 -4.44819 | gap 1, overlap 3761974 3761975 AGCTTCTCCGCCACC G-CCAATC ATA GATTGGAC TTTTAATATCTTATA Swoo_3070 3762674 - 3762138 - | GCN5-related N-acetyltransferase Swoo_3071 3762975 - 3762697 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3822 3763074 - 3763039 - R 91 -8.4 -5.1287 | opp_overlap 3763043 TTTATACCTAAAAAA TAAACCCAGCCAGTAT ATTG ATAAAAGCTGGGTTTA AAAAGCACTAAAAAT Swoo_3072 3764972 - 3763122 - | hypothetical protein TERM 3823 3765140 - 3765120 - g 70 -10.5 -2.64803 | opp_overlap 3765118, overlap 3765116 TCATTTCGAAACTCA GGTTTCAGA GAT CCTGAAACC GGTGTCTATAACCAG Swoo_3073 3765096 - 3765605 + | diguanylate cyclase TERM 3824 3765614 - 3765627 + T 90 -9.5 -4.72486 | opp_overlap 3765614 ACAGTAAATAAAAAA GCCCC TTAC GGGGC TTTTTAGACTTTATC TERM 3825 3765627 - 3765614 - T 100 -9.5 -5.69793 | opp_overlap 3765614 ACAGTAAATAAAAAA GCCCC TTAC GGGGC TTTTTAGACTTTATC Swoo_3074 3766911 - 3765652 - | tetratricopeptide domain-containing protein TERM 3826 3765835 - 3765847 + g 72 -5.5 -4.58395 | opp_overlap 3765843 AGCATTAACACCACC GGCAT CAA GTGCC TTTTTAAGCACTGGA Swoo_3075 3767534 - 3766914 - | TonB family protein Swoo_3076 3767940 - 3767536 - | biopolymer transport protein ExbD/TolR Swoo_3077 3768482 - 3767955 - | MotA/TolQ/ExbB proton channel Swoo_3078 3769837 - 3768482 - | MotA/TolQ/ExbB proton channel TERM 3827 3769603 - 3769627 + g 71 -4.3 -4.62471 | TCAGATCTTTACCGC GCTGTTCTT CAGCAGC AAGAGCGGC TTTTTCACGCTTAAG Swoo_3079 3770619 - 3769837 - | hypothetical protein TERM 3828 3770814 - 3770797 - R 83 -8.5 -4.40804 | opp_overlap 3770780 3770797 CATCATTTCACAAAA TGTTGAC CTGT GTCAACA TTTGGAAAGCGCTAA TERM 3829 3770797 - 3770814 + r 71 -8.5 -3.53444 | opp_overlap 3770797, overlap 3770780 CATCATTTCACAAAA TGTTGAC CTGT GTCAACA TTTGGAAAGCGCTAA Swoo_3080 3771746 - 3771495 - | hypothetical protein Swoo_3081 3772028 - 3771762 - | hypothetical protein TERM 3830 3772056 - 3772070 + r 95 -12.8 -3.76492 | opp_overlap 3772056 GGTTAAAAGTAAAAA GGGCGC ATT GCGCCC TTTAGTAAAGTTAAA TERM 3831 3772070 - 3772056 - R 100 -12.8 -5.0925 | opp_overlap 3772056 GGTTAAAAGTAAAAA GGGCGC ATT GCGCCC TTTAGTAAAGTTAAA Swoo_3082 3774988 - 3772091 - | TonB-dependent receptor TERM 3832 3775649 - 3775628 - R 100 -13.1 -5.27938 | opp_overlap 3775628 ACTTGCAAATAAAAA CCCAACATC AAGA GATGTTGGG TTTTAGTGGTATTGC TERM 3833 3775628 - 3775649 + r 100 -13.1 -4.35461 | opp_overlap 3775628 ACTTGCAAATAAAAA CCCAACATC AAGA GATGTTGGG TTTTAGTGGTATTGC Swoo_3083 3778426 - 3775688 - | TonB-dependent receptor TERM 3834 3778956 - 3778981 + r 76 -10.5 -2.87581 | opp_overlap 3778961, overlap 3778961 TGATTATCAGATACA AAAAACGCCCT AAAA AGGGCGTTTTA TAGTGTTTCAGTTCA TERM 3835 3778961 - 3778976 + r 89 -10.4 -4.58303 | opp_overlap 3778961, overlap 3778956 ATCAGATACAAAAAA CGCCCT AAAA AGGGCG TTTTATAGTGTTTCA TERM 3836 3778976 - 3778961 - R 100 -10.4 -5.43414 | opp_overlap 3778961 3778956 ATCAGATACAAAAAA CGCCCT AAAA AGGGCG TTTTATAGTGTTTCA Swoo_3084 3780207 - 3778999 - | porin TERM 3837 3780185 - 3780171 - G 70 -7.1 -3.89695 | TCGGTACAAATATAA CGGCT GCTAA AGCCG ATGCTACTAACGTTT Swoo_3085 3782861 - 3780438 - | DNA polymerase B region TERM 3838 3781644 - 3781630 - G 73 -6.4 -4.36914 | overlap 3781631 GCTGGCGCTACAAAA CCTGCA CGA TGCAGA TGCGGTAGATACAAA Swoo_3086 3782971 - 3785049 + | helicase c2 Swoo_3087 3785058 - 3785828 + | hypothetical protein Swoo_3088 3785825 - 3786499 + | primosomal replication protein N'', putative Swoo_3089 3786509 - 3787183 + | hypothetical protein TERM 3839 3787212 - 3787231 + F 89 -10.7 -4.58773 | opp_overlap 3787212 GCATCACACCTCAAA TGCCGGC AATTTA GCCGGCA TTTTCCTTTGCTAAA TERM 3840 3787231 - 3787212 - f 81 -10.7 -3.64599 | opp_overlap 3787212 GCATCACACCTCAAA TGCCGGC AATTTA GCCGGCA TTTTCCTTTGCTAAA TERM 3841 3787437 - 3787411 - f 76 -8.8 -3.86202 | TGGTAGCACACTAAA TTCTGACAAGGT GTC ACCCCATCAGAA GCAGCAATGGATAAC Swoo_3090 3787472 - 3787741 + | hypothetical protein TERM 3842 3787780 - 3787814 + F 75 -2.2 -5.48825 | gap 1, opp_overlap 3787763 3787780 TGATTCAAAAAATCA GCCCAATGACTATCA GTAAAG TGATAA-CAGTGGGC TTTTTTTCGCTCATG Swoo_3091 3788489 - 3788818 + | hypothetical protein Swoo_3092 3789243 - 3789998 + | hypothetical protein TERM 3843 3790220 - 3790195 - T 87 -11.9 -3.12529 | overlap 3790191 3790200 TCAATCGAAGAGATA CACAACCACGT GTGA ACGCGGCTGTG ACCTTCCGTGACATG TERM 3844 3790799 - 3790811 + T 82 -4.9 -5.46657 | opp_overlap 3790799 AAATCACTTGGAATA TCTTA CTT TAAGA TTTTTTATTGAGCTA Swoo_3093 3791147 - 3790824 - | helix-hairpin-helix repeat-containing competence protein ComEA TERM 3845 3791819 - 3791799 - g 77 -3.2 -5.27335 | overlap 3791800 TCTTTGAAACAAAAA CGGCAATG AGCAA CTTTGCCA ACCCCATTATCTACC TERM 3846 3792567 - 3792593 + G 73 -4.4 -4.78107 | opp_overlap 3792555, overlap 3792569 CGACGGGAACCAGTG TGTTTCTCGCCC ATT GGGTGACAGATA TTTTTGGTAATACTC Swoo_3094 3791537 - 3792931 + | anion transporter TERM 3847 3793233 - 3793216 - T 100 -12.7 -5.65177 | opp_overlap 3793216 ATAGCCATAAAAAAA CCGCGCT CAAC AGCGCGG TTTTTTATCAAAGGT TERM 3848 3793216 - 3793233 + T 100 -12.7 -5.24531 | opp_overlap 3793216 ATAGCCATAAAAAAA CCGCGCT CAAC AGCGCGG TTTTTTATCAAAGGT Swoo_3095 3794432 - 3793254 - | methionine gamma-lyase TERM 3849 3794346 - 3794330 - G 71 -3.7 -4.78107 | CAGCACTATCAAAAA CAAAAGT CGC ACTTTGG CATAAAGGGGTTACC Swoo_3096 3795636 - 3794539 - | hypothetical protein Swoo_3097 3797116 - 3795662 - | protein of unknown function DUF463 YcjX family protein Swoo_3098 3797563 - 3797165 - | phage shock protein C, PspC Swoo_3099 3797856 - 3797629 - | phage shock protein B Swoo_3100 3798572 - 3797883 - | phage shock protein A, PspA Swoo_3101 3798751 - 3799824 + | sigma-54 dependent trancsriptional regulator TERM 3850 3800328 - 3800338 + G 71 -2.4 -5.04385 | opp_overlap 3800328 ATCTTGTTTCCAAAA CGGG TTA CCCC TTTTTTCAAAGTATC Swoo_3102 3799910 - 3801559 + | extracellular solute-binding protein TERM 3851 3801865 - 3801878 + G 71 -2.3 -5.03314 | overlap 3801866 GCCTCATTTGAGCTA GCTGC CGTG GCAGG TTTTTTAGCACTGGC Swoo_3103 3801559 - 3802590 + | binding-protein-dependent transport systems inner membrane component Swoo_3104 3802577 - 3803467 + | binding-protein-dependent transport systems inner membrane component TERM 3852 3803928 - 3803916 - gf 77 -3.4 -5.24129 | GGTCGGCATAAAAAA CACT GACAG AGTG ATGTCCAGCTATGCA Swoo_3105 3803479 - 3804492 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 3853 3804947 - 3804935 - gf 77 -9.1 -3.74693 | TCTGAGGGGATGAAA CAGCG TGT CGCTG TTGCCCGGGCTCTCA Swoo_3106 3804467 - 3805255 + | ABC transporter related TERM 3854 3806530 - 3806547 + G 72 -8.5 -3.66178 | GATTATGATGCCGAT GTTAACC CAGA GGTTAAC TTTGACGTTGAACAG Swoo_3107 3805366 - 3806568 + | trans-2-enoyl-CoA reductase (NAD(+)) TERM 3855 3806606 - 3806629 + F 100 -10.4 -6.34616 | opp_overlap 3806605 AAATAAAAACTAAGG TGCGTTACTT CAAA AAGTAGCGCA TTTTTTTTATTTTAA Swoo_3108 3806712 - 3806921 + | TOBE domain-containing protein TERM 3856 3807213 - 3807238 + T 90 -12.1 -3.50393 | opp_overlap 3807218, overlap 3807205 GTTATTGCTTTTCAA TGCAATATACT GAAA AGTATATTGCA TTATCTCCCCTCCCC TERM 3857 3807425 - 3807454 + T 89 -12.3 -3.22409 | opp_overlap 3807431, overlap 3807431 AATAGGGCCATGTGC AAAAAAGGTCAGC AGAT GCTGACCTTTTTA TTGGGTTAGTGCTTA TERM 3858 3807448 - 3807431 - T 93 -11.3 -5.03314 | opp_overlap 3807431 3807425 GCCATGTGCAAAAAA GGTCAGC AGAT GCTGACC TTTTTATTGGGTTAG TERM 3859 3807431 - 3807448 + T 93 -11.3 -5.13741 | opp_overlap 3807431, overlap 3807425 GCCATGTGCAAAAAA GGTCAGC AGAT GCTGACC TTTTTATTGGGTTAG Swoo_3109 3809335 - 3807476 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3860 3809397 - 3809371 - R 100 -13.7 -5.89659 | opp_overlap 3809371 ATAAAAAAATAAAAA GGCGCATCACG GTGTT CGAGATGCGCC TTTTCGTAAACATTA TERM 3861 3809371 - 3809397 + r 100 -14.4 -4.2679 | opp_overlap 3809371 ATAAAAAAATAAAAA GGCGCATCACGG TGT TCGAGATGCGCC TTTTCGTAAACATTA TERM 3862 3809465 - 3809493 + r 77 -10.4 -2.98942 | opp_overlap 3809470, overlap 3809470 ATACTTAACTATTTA TAAAAGCACCGC CAGAA GCAGTGCTTTTA TCTCTATAAGAAGCT TERM 3863 3809470 - 3809488 + r 74 -5.9 -4.64844 | opp_overlap 3809470, overlap 3809465 TAACTATTTATAAAA GCACCGC CAGAA GCAGTGC TTTTATCTCTATAAG TERM 3864 3809488 - 3809470 - R 84 -8.8 -4.44915 | opp_overlap 3809470 3809465 TAACTATTTATAAAA GCACCGCC AGA AGCAGTGC TTTTATCTCTATAAG Swoo_3110 3809823 - 3809551 - | histone family protein DNA-binding protein Swoo_3111 3812439 - 3810082 - | ATP-dependent protease La TERM 3865 3810930 - 3810946 + g 80 -7.3 -4.48263 | TCTGCAGTAAATGCT GCTTAGC GAT GTTAAGC TTTTCATCTTCTGTG TERM 3866 3811989 - 3811976 - G 70 -6.7 -4.11404 | TCGATACCAGATAAA GAGGT CAAC ACCTC AGGTGGGATCTTCTT TERM 3867 3812537 - 3812557 + r 81 -6.8 -4.99861 | opp_overlap 3812539, overlap 3812539 GCTGAGAGTATAAAA AAGGAGCC ATATA GGCTCCTG TTTTTCTGCTTGCTA TERM 3868 3812555 - 3812539 - R 100 -9.4 -5.34555 | opp_overlap 3812537 3812539 TGAGAGTATAAAAAA GGAGCC ATATA GGCTCC TGTTTTTCTGCTTGC TERM 3869 3812539 - 3812555 + r 82 -9.4 -4.11322 | opp_overlap 3812539, overlap 3812537 TGAGAGTATAAAAAA GGAGCC ATATA GGCTCC TGTTTTTCTGCTTGC Swoo_3112 3813866 - 3812586 - | ATP-dependent Clp protease, ATP-binding subunit ClpX Swoo_3113 3814559 - 3813948 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 3870 3814612 - 3814583 - R 100 -15.1 -5.27938 | opp_overlap 3814583 3814584, overlap 3814584 3814609 ATCCCTAAATAAAAA CGGCTCGCATGAG GAAC CTCATACGAGCCA TTATAAATGGTGAAC TERM 3871 3814583 - 3814612 + r 79 -10.7 -3.37796 | opp_overlap 3814583 3814584 3814609, overlap 3814584 ATCCCTAAATAAAAA CGGCTCGCATGAG GAAC CTCATACGAGCCA TTATAAATGGTGAAC TERM 3872 3814611 - 3814584 - R 100 -16.4 -3.75678 | opp_overlap 3814584 3814583, overlap 3814583 3814609 TCCCTAAATAAAAAC GGCTCGCATGAG GAAC CTCATACGAGCC ATTATAAATGGTGAA TERM 3873 3814584 - 3814611 + r 95 -14.2 -2.62463 | opp_overlap 3814583 3814584 3814609, overlap 3814583 TCCCTAAATAAAAAC GGCTCGCATGAG GAAC CTCATACGAGCC ATTATAAATGGTGAA Swoo_3114 3815954 - 3814650 - | trigger factor TERM 3874 3814682 - 3814717 + g 74 -5.5 -4.60889 | opp_overlap 3814690, overlap 3814691 CCTTGTTCATAAATT CTTCAAAGTTGACTG CTTTCT CAGTCACTTTTGCAG TTTTTAACAATGCTT TERM 3875 3816183 - 3816169 - H 100 -11.4 -5.42259 | opp_overlap 3816169 TCAGGCGTAAAAAAA GCGACC TTA GGTCGC TTTTTTTACTTTCTT TERM 3876 3816169 - 3816183 + H 100 -11.4 -5.77856 | opp_overlap 3816169 TCAGGCGTAAAAAAA GCGACC TTA GGTCGC TTTTTTTACTTTCTT TERM 3877 3816322 - 3816344 + H 74 -9.8 -2.88544 | overlap 3816325 GATTCGAACCTGCGG CCACCCGCTT AGA AGGCGGGTGC TCTATCCAACTGAGC TERM 3878 3816325 - 3816341 + H 74 -10.1 -2.69468 | overlap 3816322 TCGAACCTGCGGCCA CCCGCTT AGA AGGCGGG TGCTCTATCCAACTG TERM 3879 3816411 - 3816428 + H 76 -7.1 -4.26076 | ATCCTGAATTAGCAT TGAAAGA CTAA TCTTTCA TTTTACTCGCAATAA TERM 3880 3816588 - 3816568 - H 74 -9.7 -2.71364 | opp_overlap 3816563 CTATTTCTTCAATCA GCACCAGAG TGT CTCTGGTTC CGCTATCGATTCCAA TERM 3881 3817542 - 3817529 - g 74 -6.7 -4.3898 | ATGACCCTGATAAAA TCGAC TGGC GTCGA CACTTATGGCTTGGA Swoo_3115 3817076 - 3817936 + | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 3882 3817997 - 3818045 + T 79 -9.8 -3.45536 | opp_overlap 3818006 3818014, overlap 3818006 3818014 AAATCTTCATCAATG TTCCAGACATAAAAAAACCTGC ATTAA GCAGGTTTTTTTATGTGGTGAG TTCTAAATTACTTCT TERM 3883 3818006 - 3818036 + T 95 -14.3 -2.83905 | opp_overlap 3818006 3818014, overlap 3817997 3818014 TCAATGTTCCAGACA TAAAAAAACCTGC ATTAA GCAGGTTTTTTTA TGTGGTGAGTTCTAA TERM 3884 3818036 - 3818006 - T 95 -14.3 -2.88579 | opp_overlap 3817997 3818006 3818014, overlap 3818014 TCAATGTTCCAGACA TAAAAAAACCTGC ATTAA GCAGGTTTTTTTA TGTGGTGAGTTCTAA TERM 3885 3818028 - 3818014 - T 100 -7.1 -5.76633 | opp_overlap 3818006 3817997 3818014, overlap 3818006 CCAGACATAAAAAAA CCTGC ATTAA GCAGG TTTTTTTATGTGGTG TERM 3886 3818014 - 3818028 + T 100 -7.1 -5.74122 | opp_overlap 3818014 3818006, overlap 3818006 3817997 CCAGACATAAAAAAA CCTGC ATTAA GCAGG TTTTTTTATGTGGTG Swoo_3116 3819432 - 3818053 - | cysteinyl-tRNA synthetase Swoo_3117 3819677 - 3820177 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 3887 3820204 - 3820233 + G 79 -12.2 -2.63596 | GCGTACACTTTTTAT TGGCGATCTGCA TCTATC TGCAGATCGCCC TGATATCACCTCAGC TERM 3888 3820843 - 3820833 - g 80 -6.8 -4.87273 | overlap 3820822 AAGAGTGTACAAAAA CACG AAT CGTG GTGGGTGACTGGTAT Swoo_3118 3820187 - 3820924 + | UDP-2,3-diacylglucosamine hydrolase Swoo_3119 3821791 - 3821027 - | tRNA--hydroxylase Swoo_3120 3822169 - 3822765 + | hypothetical protein TERM 3889 3822789 - 3822812 + T 100 -15.4 -4.74706 | opp_overlap 3822789 CCTAGCAAACAAAAA GGCTTTAGGG TTTC CCCTAAAGCC TTTTTAGATCTTACG TERM 3890 3822812 - 3822789 - T 100 -15.4 -5.33405 | opp_overlap 3822789 CCTAGCAAACAAAAA GGCTTTAGGG TTTC CCCTAAAGCC TTTTTAGATCTTACG Swoo_3121 3824523 - 3822853 - | glutaminyl-tRNA synthetase TERM 3891 3824705 - 3824689 - R 100 -9.4 -5.86976 | opp_overlap 3824689 TGATAAAACAAAAAA GCAGCG ATAAA CGCTGC TTTTTAAGACGAAAT TERM 3892 3824689 - 3824705 + r 88 -9.4 -4.56775 | opp_overlap 3824689 TGATAAAACAAAAAA GCAGCG ATAAA CGCTGC TTTTTAAGACGAAAT Swoo_3122 3827020 - 3824726 - | ferrous iron transport protein B TERM 3893 3826174 - 3826160 - G 81 -2.1 -5.50774 | gap 1, overlap 3826162 CATAACAAACAAAAA GACAGG CACA CCTG-C AACTGGATGCAGAAT TERM 3894 3826173 - 3826162 - G 70 -5.8 -4.35561 | overlap 3826160 TAACAAACAAAAAGA CAGG CACA CCTG CAACTGGATGCAGAA Swoo_3123 3827282 - 3827013 - | FeoA family protein Swoo_3124 3827925 - 3830150 + | decaheme cytochrome c TERM 3895 3830184 - 3830159 - f 78 -9.7 -3.23152 | opp_overlap 3830157 3830156, overlap 3830151 ACACTAATTGATTAA GGTGGATGGGA CAAC CCCCATCCATC AATATTCAATTCACC TERM 3896 3830205 - 3830221 + F 100 -13.7 -4.72272 | opp_overlap 3830205 TCAATTCACCCATAA GGGAGGC TTA GCCTCCC TTTTTAATGAGAACG TERM 3897 3830221 - 3830205 - f 100 -13.7 -3.3785 | opp_overlap 3830205 TCAATTCACCCATAA GGGAGGC TTA GCCTCCC TTTTTAATGAGAACG TERM 3898 3832270 - 3832244 - g 74 -9.4 -3.40382 | opp_overlap 3832243, overlap 3832246 GATGAAACTGCATAA GACCCATAGTCA AGG CGACTACGGGGC CATTCCTGGTATGAA TERM 3899 3832268 - 3832246 - g 78 -10.6 -3.2665 | opp_overlap 3832243, overlap 3832244 TGAAACTGCATAAGA CCCATAGTCA AGG CGACTACGGG GCCATTCCTGGTATG Swoo_3125 3830547 - 3832550 + | decaheme cytochrome c TERM 3900 3832572 - 3832592 + F 86 -11.1 -3.87373 | opp_overlap 3832571, overlap 3832573 ATTTTGAGATTGAAC CTGGGGGAG TCT CTCCCCCAC TTTCTCCAAAGTATG TERM 3901 3832573 - 3832591 + F 95 -14.6 -2.92102 | opp_overlap 3832571, overlap 3832572 TTTTGAGATTGAACC TGGGGGAG TCT CTCCCCCA CTTTCTCCAAAGTAT Swoo_3126 3832627 - 3833628 + | cytochrome C family protein TERM 3902 3833940 - 3833930 - g 74 -8.2 -4.08767 | CTTATGTGGGTAAAA GCGG CTA CCGC GCCACTGTCGAAGCT Swoo_3127 3833644 - 3835740 + | outer membrane protein precursor MtrB TERM 3903 3835790 - 3835829 + F 100 -15.2 -4.26344 | opp_overlap 3835795, overlap 3835795 3835828 AGCTTCGAGCTTCGA AAAAAGGCTAGATCCCAT ACCC ATGGGTTCTAGCCTTTTC TTTTGGTAAAGATAT TERM 3904 3835824 - 3835795 - f 100 -15.1 -5.02074 | opp_overlap 3835790 3835795 CGAGCTTCGAAAAAA GGCTAGATCCCAT ACCC ATGGGTTCTAGCC TTTTCTTTTGGTAAA TERM 3905 3835795 - 3835824 + F 100 -15.1 -5.13722 | opp_overlap 3835795, overlap 3835790 CGAGCTTCGAAAAAA GGCTAGATCCCAT ACCC ATGGGTTCTAGCC TTTTCTTTTGGTAAA TERM 3906 3836205 - 3836188 - g 93 -5.5 -5.47399 | CCAACGGGAAAAAAA GTGGCGA TAAA CCACCAC TAAAAAGATGTGCAG TERM 3907 3836440 - 3836430 - g 72 -3.2 -5.02074 | CTATTTTTGAAAAAA CACC CTG AGTG CGAAGCGAACCTGCT Swoo_3128 3835884 - 3836510 + | uracil-DNA glycosylase superfamily protein TERM 3908 3836526 - 3836546 + T 81 -9.8 -3.72989 | opp_overlap 3836526 AGATAGACAAAAAAA GCCTACAT ACTTG ATGTAGGC TTTAGGTCTGAGTTT TERM 3909 3836546 - 3836526 - T 100 -9.8 -5.77988 | opp_overlap 3836526 AGATAGACAAAAAAA GCCTACAT ACTTG ATGTAGGC TTTAGGTCTGAGTTT Swoo_3129 3838065 - 3836566 - | peptidase M4 thermolysin TERM 3910 3836877 - 3836891 + g 72 -10 -2.84393 | opp_overlap 3836877 3836876, overlap 3836876 GATCATCCATATAAC GCAGTG CAC CACTGC CTTTAACTATGTCAT TERM 3911 3836891 - 3836877 - G 71 -10 -2.71416 | opp_overlap 3836876 3836877, overlap 3836876 GATCATCCATATAAC GCAGTG CAC CACTGC CTTTAACTATGTCAT Swoo_3130 3838698 - 3839846 + | transcriptional regulator, CdaR Swoo_3131 3840017 - 3841003 + | diguanylate cyclase Swoo_3132 3841073 - 3842137 + | lytic transglycosylase catalytic TERM 3912 3842395 - 3842377 - f 73 -3.8 -5.17054 | overlap 3842368 3842366 3842363 3842378 ATAATAGCCAAAAAA CTTAGCCA TCA CGGCTAAT CCATAAAAATAGCGA TERM 3913 3843084 - 3843074 - g 74 -5.4 -4.68593 | CTGAGGAGCTAAAAA CTCA GGT TGAG GAGTTTGATAACCTA Swoo_3133 3842434 - 3843792 + | gluconate transporter TERM 3914 3844386 - 3844371 - g 72 -3.2 -5.00895 | overlap 3844372 CCTACTAGATAAAAA GGGCAA CCCC TTGCCA GTAGGTGGCGCATCT TERM 3915 3844821 - 3844811 - g 71 -4.6 -4.70659 | CTTTACACGGAAAAA CCCC TAT GGGA GTGACACGGATCGCA Swoo_3134 3843886 - 3845064 + | glycerate kinase TERM 3916 3845107 - 3845122 + F 87 -10.4 -4.2717 | GCATTAACGACATTC CCGCCA TCCG TGGCGG TTTTCATGAAATAGT Swoo_3135 3845726 - 3847381 + | pyridoxal-dependent decarboxylase TERM 3917 3847388 - 3847378 - T 70 -2.6 -5.16572 | AGCTAACTTAAAAAA TTAA CGC TTAA GAAAAAGGCGAAGAG TERM 3918 3847395 - 3847419 + T 100 -10 -5.47159 | opp_overlap 3847395 AACGCTTAAGAAAAA GGCGAAGAGA GCAAA TCTCCTCGCC TTTTTTATATTGCGA TERM 3919 3847419 - 3847395 - T 100 -12.2 -5.08088 | opp_overlap 3847395 AACGCTTAAGAAAAA GGCGAAGAGA GCAAA TCTCCTCGCC TTTTTTATATTGCGA Swoo_3136 3848050 - 3847448 - | GCN5-related N-acetyltransferase Swoo_3137 3848495 - 3848094 - | putative thiol-disulphide oxidoreductase DCC Swoo_3138 3848774 - 3849613 + | AraC family transcriptional regulator Swoo_3139 3849705 - 3850421 + | AzlC family protein TERM 3920 3850460 - 3850472 + G 74 -3.3 -5.07486 | overlap 3850459 GCCATACTCGTTTTT GGCAG CCG CTACC TTTTTCTTGAACCTA Swoo_3140 3850418 - 3850720 + | branched-chain amino acid transport Swoo_3141 3850734 - 3851075 + | NIPSNAP family protein Swoo_3142 3851787 - 3851089 - | helix-turn-helix type 11 domain-containing protein Swoo_3143 3852386 - 3851889 - | transcription activator effector binding TERM 3921 3852451 - 3852427 - R 77 -9.4 -3.41636 | overlap 3852431 AATTAATTTAACTAA TAAAGCCAGT TCAAT ACTGGCTTCA GGTCCTAACACACTC TERM 3922 3852447 - 3852431 - R 79 -8 -4.34223 | overlap 3852427 AATTTAACTAATAAA GCCAGT TCAAT ACTGGC TTCAGGTCCTAACAC Swoo_3144 3852854 - 3852468 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3923 3853057 - 3853043 - R 100 -7.8 -5.63504 | opp_overlap 3853043 AAGGGCACAAAAAAA GCACCC TAA AGGTGC TCTTGAGTCGTGAGG Swoo_3145 3853362 - 3853087 - | hypothetical protein Swoo_3146 3854516 - 3853554 - | hypothetical protein Swoo_3147 3854612 - 3855169 + | chorismate mutase Swoo_3148 3855942 - 3855166 - | hypothetical protein TERM 3924 3855255 - 3855281 + g 71 -10.3 -2.80816 | opp_overlap 3855257 3855260, overlap 3855258 CCCAACTTTTCAGCA CAGGAGTGAAA ATAGC TTTCACTCTTG TCTCATCCATGCCAG TERM 3925 3855258 - 3855278 + g 71 -8.4 -3.55447 | opp_overlap 3855257 3855260, overlap 3855255 AACTTTTCAGCACAG GAGTGAAA ATAGC TTTCACTC TTGTCTCATCCATGC Swoo_3149 3856305 - 3857597 + | putative serine transporter TERM 3926 3857634 - 3857605 - T 100 -12.3 -5.33405 | opp_overlap 3857608 3857610 TTCAGTAAATAAAAA GGAGACAAAAACT TAGC AGTTTATGTCTCC TTAACAAGCATTTAC Swoo_3150 3865658 - 3857646 - | lipoprotein TERM 3927 3860165 - 3860155 - G 80 -6.8 -4.78848 | GCCCGAAATACAAAA GGAG CTT CTCC TCCAACCACTTTTTG TERM 3928 3862643 - 3862669 + g 85 -10.2 -4.21194 | opp_overlap 3862643 GATTACTACTACAAC TTGGTGCTGCTG GTG CGGCAGTATCAA TTTTCACTAATAACG TERM 3929 3863698 - 3863688 - G 72 -5.4 -4.4648 | overlap 3863689 AGTGGCACCATAAAA TGCA TTT TGCA TGCTAGTCCAGACAC Swoo_3151 3867548 - 3865815 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 3930 3867752 - 3867768 + r 73 -4.4 -4.87807 | opp_overlap 3867750, overlap 3867750 GTTTAAACCAAAGCT CCTTCT CACTC AGGAGG TTTTTACTCTCTTGA Swoo_3152 3868592 - 3867732 - | hypothetical protein TERM 3931 3868144 - 3868129 - G 70 -5.4 -4.30014 | opp_overlap 3868119, overlap 3868130 CTCACTAAGGTAAAA CCTTGC TTTT GCAAGA TATCACTATCAGGCC Swoo_3153 3868772 - 3869623 + | pseudouridine synthase Swoo_3154 3870011 - 3869649 - | hypothetical protein Swoo_3155 3870565 - 3870104 - | hypothetical protein TERM 3932 3870567 - 3870535 - G 70 -7 -4.07687 | opp_overlap 3870543 3870555 AGCCTGTGTCCAAAA CCTCAACATCAGCG AGCAG CGCTAATGTCATGG ACTCAACACTCGATG Swoo_3156 3871807 - 3870722 - | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 3933 3871235 - 3871245 + g 72 -5.4 -4.59109 | AATAAGATGCGGCCT CAGT GAC ACTG TTTTTAGCACCTCTG Swoo_3157 3873539 - 3871815 - | AMP-dependent synthetase and ligase TERM 3934 3873591 - 3873574 - R 100 -11.3 -5.4505 | opp_overlap 3873571 TCTTTCAATAAAAAA GCGGATC TGAT GATCCGC TAATACTTGTTCAAA Swoo_3158 3874508 - 3873615 - | alpha/beta hydrolase fold TERM 3935 3874252 - 3874263 + g 71 -2.2 -5.07567 | AGCAGAGCTTCGAGA TCGT CAAT ACGG TTTTTTAACGTGTAA TERM 3936 3874556 - 3874533 - R 74 -9.6 -3.16668 | opp_overlap 3874533, overlap 3874537 TAATATTTTTATCAA CAAAGCCCGA TTAA TCAGGCTCTG TTTTTATAGGCTTAA TERM 3937 3874533 - 3874556 + r 74 -5.2 -4.87786 | opp_overlap 3874533 3874537 TAATATTTTTATCAA CAAAGCCCGA TTAA TCAGGCTCTG TTTTTATAGGCTTAA TERM 3938 3874552 - 3874537 - R 73 -6.8 -4.2461 | opp_overlap 3874533, overlap 3874533 ATTTTTATCAACAAA GCCCGA TTAA TCAGGC TCTGTTTTTATAGGC Swoo_3159 3875671 - 3874622 - | 3-oxoacyl-(ACP) synthase III Swoo_3160 3877149 - 3875929 - | hypothetical protein Swoo_3161 3878480 - 3877299 - | methyl-accepting chemotaxis protein TERM 3939 3877938 - 3877965 + g 74 -4.1 -4.99638 | opp_overlap 3877930 ATTAAAGGCCGAGTG CCGGCTAAATG TCATCT CAGTTAGCGGG TTTTTATCTACATAT TERM 3940 3878372 - 3878329 - G 71 -5.2 -4.56775 | ACCTTGCTGTAAAAA GAGCTGCTAAAGTCACGGCT AAAC ACCCGCATATTTAGCTGCTC TTGAGGAAGGGGTTC Swoo_3162 3878720 - 3878965 + | hypothetical protein TERM 3941 3879000 - 3878978 - T 100 -12.1 -5.33026 | opp_overlap 3878978 3878973 TAACCGAAACAAAAA GAGATAGGC TAAGT GCCTATCTC TTCCATTTAAACCTA TERM 3942 3878978 - 3879000 + T 89 -12.1 -3.28001 | opp_overlap 3878978, overlap 3878973 TAACCGAAACAAAAA GAGATAGGC TAAGT GCCTATCTC TTCCATTTAAACCTA Swoo_3163 3879413 - 3879051 - | HNH endonuclease TERM 3943 3879492 - 3879509 + r 83 -11.3 -3.70811 | opp_overlap 3879492 CAATAGATAAAAAAA CAGCCCT AAAA AGGGCTG TTTAACGTTATCTGA TERM 3944 3879509 - 3879492 - R 100 -11.3 -5.80248 | opp_overlap 3879492 CAATAGATAAAAAAA CAGCCCT AAAA AGGGCTG TTTAACGTTATCTGA Swoo_3164 3881523 - 3879541 - | choline/carnitine/betaine transporter TERM 3945 3881965 - 3881979 + r 89 -7.8 -5.0538 | opp_overlap 3881965, overlap 3881976 CATATTAGAAAAAAA GCAGCG TAA TGCTGC TTTTTTAAGGTAAAA TERM 3946 3881979 - 3881965 - R 100 -7.1 -5.69473 | opp_overlap 3881965 3881976 CATATTAGAAAAAAA GCAGC GTAAT GCTGC TTTTTTAAGGTAAAA Swoo_3165 3882742 - 3882032 - | phosphate uptake regulator, PhoU Swoo_3166 3883613 - 3882795 - | phosphate ABC transporter, ATPase subunit Swoo_3167 3885335 - 3883683 - | phosphate ABC transporter, inner membrane subunit PstA Swoo_3168 3887668 - 3885410 - | binding-protein-dependent transport systems inner membrane component TERM 3947 3886576 - 3886565 - G 70 -5.8 -4.41844 | AAAATTCTCAGAAAA CAGC TTAC GCTG ACTAGTGGTATAGAG Swoo_3169 3887844 - 3888338 + | amino acid-binding ACT domain-containing protein TERM 3948 3888431 - 3888446 + F 79 -6.1 -4.85599 | opp_overlap 3888431 ACTACTCTGATATAA GGGAG GTTACG CTCCC TTTTTATCCAATCCC TERM 3949 3888686 - 3888676 - g 100 -3.2 -6.13503 | overlap 3888677 GATCAATAAAAAAAA TGCG TGC CACA CTGGATGATAACCAG Swoo_3170 3888654 - 3889469 + | hypothetical protein TERM 3950 3889491 - 3889507 + F 83 -6.5 -5.055 | opp_overlap 3889487 3889491 AAGCCAGTACAGCAA GGACCTG CCA TGGGTCC TTTTTTACAAATTAA Swoo_3171 3889682 - 3889993 + | hypothetical protein Swoo_3172 3890507 - 3890007 - | GCN5-related N-acetyltransferase TERM 3951 3890724 - 3890742 + G 70 -6 -4.27316 | TAGGTACGGAATTTG GTGGTG ATGGTCG CACCAC TTTTGGCTTACCCGA Swoo_3173 3890588 - 3891127 + | tail collar domain-containing protein TERM 3952 3892034 - 3892018 - g 83 -10.9 -3.61894 | opp_overlap 3892017 3892016 3892020 AACTTTGGCCAATAA CATTGCC GCG GGCAATG ACTTTGTCATCAACT TERM 3953 3895912 - 3895926 + G 78 -8.6 -4.14739 | opp_overlap 3895912 ACTTGATACCGACAA TGGTGA CAC TCACCA TTTTACGATCAGTAA TERM 3954 3897696 - 3897682 - g 74 -10 -3.14211 | AGGTGTTTGTATCAA GCTAGG TAG CCTAGC AGTTGGAGGAGAGCG Swoo_3174 3891212 - 3899359 + | dystroglycan-type cadherin domain-containing protein TERM 3955 3899399 - 3899382 - T 73 -6.9 -4.11275 | opp_overlap 3899384, overlap 3899384 ATAATTCAAACTAAA TAGGGGC ATTT GCCCCTT TTCTGTTCAAGAAAT TERM 3956 3899384 - 3899397 + T 88 -9.5 -4.66537 | opp_overlap 3899384 3899382 AATTCAAACTAAATA GGGGC ATTT GCCCC TTTTCTGTTCAAGAA TERM 3957 3899397 - 3899384 - T 78 -9.5 -3.64028 | opp_overlap 3899384, overlap 3899382 AATTCAAACTAAATA GGGGC ATTT GCCCC TTTTCTGTTCAAGAA Swoo_3175 3899824 - 3899417 - | cupin 2 domain-containing protein TERM 3958 3900110 - 3900126 + H 74 -5.9 -4.52857 | AACACAGAGCAAAGT GGTAGAT ATC ATTTACC TTTTCTATAAACGCT Swoo_3176 3900322 - 3901239 + | alpha/beta hydrolase fold Swoo_3177 3901243 - 3902211 + | lipase chaperone-like protein TERM 3959 3902232 - 3902206 - T 100 -16 -2.65279 | overlap 3902188 3902202 3902203 GAACTGTTAAATGCA GGCTAGCCTAAC CAA ATTAGGCTAGCC AAAGGGCTTATTGCT Swoo_3178 3902668 - 3902240 - | hypothetical protein TERM 3960 3902506 - 3902516 + g 76 -5.4 -4.88067 | TGCACTTAAGCTTAA TGTG AGT CACA TTTTTCTCACTACCT Swoo_3179 3903251 - 3902688 - | hypothetical protein TERM 3961 3903394 - 3903408 + H 74 -8.6 -3.41125 | CTATGATCGCCCCGA GGTTGA GAA TCAACC TTATCAATATATCGA Swoo_3180 3903439 - 3904008 + | hypothetical protein TERM 3962 3904124 - 3904113 - T 73 -3.6 -5.02323 | opp_overlap 3904114, overlap 3904114 TGATGATAAACAAAA CCCC CATA GAGG TATTTAGTTGCCTCA Swoo_3181 3905143 - 3904094 - | 3-oxoacyl-(ACP) synthase III Swoo_3182 3905874 - 3905134 - | hypothetical protein Swoo_3183 3908020 - 3905867 - | exporter of the RND superfamily protein-like protein TERM 3963 3907443 - 3907456 + g 70 -6.7 -4.07568 | opp_overlap 3907443 3907442 AAGCCGGGAATAAAC CACGA TAAA TCGTG TTTTAGCACAGAAGC TERM 3964 3907584 - 3907570 - G 76 -8.6 -3.94333 | opp_overlap 3907572 3907576 GATTAACAGATGAAA CACTCT CTA AGAGTG CCTTGGTCCCTTTTA TERM 3965 3908682 - 3908662 - g 70 -2.5 -5.00616 | overlap 3908666 TTGCTTTTGAAAAAA CCAATATCA CCA TGATAAGGG GAGTTGATAAACCAG Swoo_3184 3908415 - 3909548 + | hypothetical protein Swoo_3185 3909552 - 3911000 + | diguanylate cyclase with PAS/PAC sensor TERM 3966 3911423 - 3911412 - g 77 -7.2 -4.30978 | opp_overlap 3911420, overlap 3911414 CCTAATCCAGGAAAA GCCG GCTC CGGC GTTGCCGTGTATCGT Swoo_3186 3911124 - 3911879 + | ribonuclease H TERM 3967 3911910 - 3911930 + F 77 -8.4 -4.02022 | opp_overlap 3911913 ACAATGTTCCCTCAA GCACTAAA CAATC TTTAGTGC TTTATCCTGATTAGC TERM 3968 3912403 - 3912388 - f 77 -10.4 -3.0263 | ACTATTTCTTGAAGA CCGCCA TGGA TGGCGG GAATGTCGATAATGC Swoo_3187 3912528 - 3912923 + | hypothetical protein TERM 3969 3913424 - 3913380 - g 81 -2.4 -5.56112 | gap 2, overlap 3913405 AGAAAAATGAAAAAA CTTACCCAAC-ACTTG-TGATT AAT AATCAACAGATAGTTGAGCAAG CACAGAAATTAGTTC Swoo_3188 3913031 - 3914392 + | leucyl aminopeptidase TERM 3970 3914668 - 3914684 + F 70 -8.7 -3.13403 | opp_overlap 3914660, overlap 3914666 3914670 GGCAACACTAAGTTT TAGGGGT TCC ACCCCTG TATTAATGGCCGGAC TERM 3971 3914670 - 3914682 + F 70 -9.1 -3.12895 | overlap 3914668 3914666 CAACACTAAGTTTTA GGGGT TCC ACCCC TGTATTAATGGCCGG TERM 3972 3915188 - 3915203 + G 78 -6.1 -4.66537 | opp_overlap 3915169 ACGCCATCAAATGGC GCACC ATCATC GGTGC TTTTATCTTACAAGC TERM 3973 3915496 - 3915475 - g 71 -4.3 -4.62069 | GGTGCACTCCAAAAA CTGCTTGGC ATTA GTCGAGCAG AGTCTCTAGTCACCA Swoo_3189 3915100 - 3916308 + | nucleoside transporter TERM 3974 3916356 - 3916326 - T 100 -14.9 -4.77867 | opp_overlap 3916332, overlap 3916332 ACATATAACAGAAAA CAAAAAGGCGAGC ATTAA GCTCGCCTTTTTA TACTGATTGGTATTA TERM 3975 3916332 - 3916350 + T 100 -11.7 -4.94902 | opp_overlap 3916326 3916332 AACAGAAAACAAAAA GGCGAGC ATTAA GCTCGCC TTTTTATACTGATTG TERM 3976 3916350 - 3916332 - T 100 -11.7 -5.60556 | opp_overlap 3916332, overlap 3916326 AACAGAAAACAAAAA GGCGAGC ATTAA GCTCGCC TTTTTATACTGATTG Swoo_3190 3917987 - 3916392 - | ABC transporter related Swoo_3191 3920489 - 3918207 - | copper-translocating P-type ATPase Swoo_3192 3920610 - 3920990 + | MerR family transcriptional regulator Swoo_3193 3923028 - 3921001 - | peptidase S9 prolyl oligopeptidase TERM 3977 3921168 - 3921184 + g 85 -8 -4.66609 | CGAAAAATAGGTAGG CAGTGG GGACA CCACTG TTTTTAAGTGCGGTA TERM 3978 3921221 - 3921235 + g 73 -5 -4.59853 | AGTTTCGACTGCTTA TCCGAT ACA ATTGGA TTTTTCCCCCCTTGA TERM 3979 3922437 - 3922427 - G 76 -5.4 -4.79223 | opp_overlap 3922427 GGAGAGGAGTAAAAA TCAG CGC CTGA TATCATCTCCTCACC TERM 3980 3922952 - 3922971 + g 73 -10 -3.01712 | ATTTCATGTTTAGGA GCGGGTTG CTCA CAACCTGC TATTAACAAAGAGGC Swoo_3194 3923354 - 3923094 - | hypothetical protein TERM 3981 3923607 - 3923622 + r 77 -6 -4.81212 | opp_overlap 3923608, overlap 3923608 GATTGATAATAAAAA ACGGGC CTAA GCCCGC TTTTCTTATCCTCCA TERM 3982 3923621 - 3923608 - R 100 -9.5 -5.56673 | opp_overlap 3923607 3923608 ATTGATAATAAAAAA CGGGC CTAA GCCCG CTTTTCTTATCCTCC TERM 3983 3923608 - 3923621 + r 77 -9.5 -3.48004 | opp_overlap 3923608, overlap 3923607 ATTGATAATAAAAAA CGGGC CTAA GCCCG CTTTTCTTATCCTCC Swoo_3196 3924543 - 3923785 - | short-chain dehydrogenase/reductase SDR Swoo_3197 3925465 - 3924548 - | 3-hydroxyisobutyrate dehydrogenase Swoo_3198 3926667 - 3925522 - | enoyl-CoA hydratase/isomerase Swoo_3199 3927471 - 3926698 - | enoyl-CoA hydratase/isomerase Swoo_3200 3928719 - 3927562 - | acyl-CoA dehydrogenase domain-containing protein Swoo_3201 3930365 - 3928860 - | methylmalonate-semialdehyde dehydrogenase Swoo_3202 3931653 - 3930451 - | acetyl-CoA acetyltransferase Swoo_3203 3932444 - 3932115 - | hypothetical protein TERM 3984 3932547 - 3932516 - R 75 -4.4 -5.15969 | overlap 3932521 TTTCAAGCTAAAAAA TGAAATCAGCCTTC CAAA GAAGGCTGATAAAA ACCACGAATAAACTC TERM 3985 3932542 - 3932521 - R 100 -13.1 -4.43669 | overlap 3932516 AGCTAAAAAATGAAA TCAGCCTTC CAAA GAAGGCTGA TAAAAACCACGAATA TERM 3986 3932596 - 3932615 + r 70 -8 -3.58208 | opp_overlap 3932599, overlap 3932599 TGAAAGTAGATGATT TAAGTTGA ACAC TCAACTTA TTGCTTATTCTCCCA Swoo_3204 3933557 - 3932613 - | homoserine O-succinyltransferase Swoo_3205 3934066 - 3933635 - | hypothetical protein TERM 3987 3934822 - 3934810 - g 77 -9.1 -3.85698 | GGTTTGCTTGATAAA GCTGC CAT GCAGC AAAACAGGTTATGGC Swoo_3206 3934261 - 3935028 + | short-chain dehydrogenase/reductase SDR TERM 3988 3935081 - 3935053 - T 100 -13.4 -4.86862 | opp_overlap 3935060, overlap 3935060 TCGAAAAAAGCAAAA TAAAAAAGGAGC GATAA GCTCCTTTTTTA GTAATAGTCTATACC TERM 3989 3935060 - 3935074 + T 91 -7.1 -5.19212 | opp_overlap 3935060 3935053 AAGCAAAATAAAAAA GGAGC GATAA GCTCC TTTTTTAGTAATAGT TERM 3990 3935074 - 3935060 - T 100 -7.1 -5.85244 | opp_overlap 3935060, overlap 3935053 AAGCAAAATAAAAAA GGAGC GATAA GCTCC TTTTTTAGTAATAGT Swoo_3207 3935764 - 3935120 - | OmpW family protein Swoo_3208 3936735 - 3936166 - | hypothetical protein TERM 3991 3936772 - 3936759 - R 100 -8.1 -5.46698 | opp_overlap 3936758 3936759, overlap 3936740 CTTAAAACGAAAAAA GGAGC TAAC GCTCC CTTTTAATCAATAAT TERM 3992 3936799 - 3936809 + r 75 -8.2 -3.72893 | TAATTTCTTTATCTT GCGG GTA CCGC TTTCATCAAGACCTC Swoo_3209 3937187 - 3936792 - | hypothetical protein Swoo_3210 3938095 - 3937229 - | acyl-CoA thioesterase II TERM 3993 3938029 - 3937996 - G 71 -8.9 -3.34398 | opp_overlap 3937994 3938000, overlap 3937994 CTTGCCCGCCAAAGA CATGGCCAAAACCCA AGTC TTGGCTTTGACCACG AAATAAACCAACCTC Swoo_3211 3939134 - 3938214 - | short-chain dehydrogenase/reductase SDR Swoo_3212 3939712 - 3940584 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 3994 3940629 - 3940654 + F 75 -8.4 -3.70902 | gap 1 AGATAAGCTTGAGAT TGGAGCA-CCA TAGAC TGGATGCTCCA TTTAGATCTACAGAG TERM 3995 3940865 - 3940886 + G 83 -11.5 -3.2963 | overlap 3940884 TTACCGGTTTGCTCT CCCTGCACC TACT GGTGCTGGG TTATCGCACCCTCAT Swoo_3213 3940675 - 3940926 + | hypothetical protein Swoo_3214 3941344 - 3940937 - | glyoxalase/bleomycin resistance protein/dioxygenase Swoo_3215 3942232 - 3941396 - | methyltransferase type 11 Swoo_3216 3942497 - 3942309 - | hypothetical protein Swoo_3217 3942866 - 3942540 - | hypothetical protein TERM 3996 3945071 - 3945049 - g 72 -7.7 -4.00038 | opp_overlap 3945049, overlap 3945032 CACCACGATTACAAA CGTCAAAGG GATCT CCTTTGCCG TTGATAAACAAAAAG Swoo_3218 3943061 - 3945334 + | peptidase U32 Swoo_3219 3945438 - 3946100 + | glutathione S-transferase domain-containing protein TERM 3997 3946147 - 3946100 - T 100 -15.2 -3.90048 | opp_overlap 3946111, overlap 3946111 GTTTGGTGAAAAATA GGTATAAAAAAGCCGAACATTA ACAC TAATGTTCGGCTTTTTCATTCT ACACGATTCAGACTT TERM 3998 3946136 - 3946111 - T 100 -14.9 -5.30686 | opp_overlap 3946111, overlap 3946100 AATAGGTATAAAAAA GCCGAACATTA ACAC TAATGTTCGGC TTTTTCATTCTACAC TERM 3999 3946111 - 3946136 + T 100 -14.9 -4.93365 | opp_overlap 3946100 3946111 AATAGGTATAAAAAA GCCGAACATTA ACAC TAATGTTCGGC TTTTTCATTCTACAC Swoo_3220 3947708 - 3946155 - | 6-phosphogluconate dehydrogenase, decarboxylating TERM 4000 3946922 - 3946940 + g 72 -6.7 -4.1552 | CACTTATCTCCATCA GGTAGCT GTTTA GGCTACC TTTATTCCAGCGCTC TERM 4001 3947792 - 3947772 - R 78 -9.8 -3.37344 | opp_overlap 3947772 TGGCTAGTTAACCAA CCTAACTC TTAGC GAGTTAGG TTATATACACAAACC TERM 4002 3947772 - 3947792 + r 79 -9.8 -3.48276 | opp_overlap 3947772 TGGCTAGTTAACCAA CCTAACTC TTAGC GAGTTAGG TTATATACACAAACC TERM 4003 3948041 - 3948007 - R 71 -3.7 -4.91987 | gap 2, overlap 3948009 AAGTTAACAATAAAA GATC-TCTGGGGC-TAA GTG TTATGCCCCGGATAATC AAGCCATTATTTAAC Swoo_3221 3949970 - 3948048 - | AMP-dependent synthetase and ligase TERM 4004 3948764 - 3948775 + g 77 -7.2 -4.32857 | TCAAATTTGCCGCTA CGGG CCAA CCCG TTTCTGTTTGCCACC Swoo_3222 3950197 - 3950595 + | MerR family transcriptional regulator Swoo_3223 3950674 - 3951843 + | acyl-CoA dehydrogenase domain-containing protein TERM 4005 3952049 - 3952035 - g 77 -3.6 -5.20333 | overlap 3952036 GATCTACAACAAAAA CTCAAT GTC ATTGAA CAGGGCGGCGGTGAT Swoo_3224 3951939 - 3953546 + | propionyl-CoA carboxylase Swoo_3225 3953623 - 3954462 + | enoyl-CoA hydratase/isomerase TERM 4006 3954970 - 3954960 - g 82 -6.8 -4.99947 | opp_overlap 3954959 GCGAAGCAAAGAAAA TGGG CTT CCCA CTACTTATCAAAGCG TERM 4007 3956224 - 3956212 - g 74 -3.3 -5.04175 | CCAAGCAGATAAAAA CCGTG ATC CACTG ACAGATAAAAACCAA Swoo_3226 3954464 - 3956593 + | carbamoyl-phosphate synthase L chain ATP-binding TERM 4008 3956957 - 3956931 - g 71 -8.9 -3.37245 | gap 1, overlap 3956932 TCAGCGTAATATCAA CTGCTCAATAGA GGAA TCTATTGAGC-G CTTCGCCCCTGTAAT Swoo_3227 3956596 - 3957486 + | pyruvate carboxyltransferase Swoo_3228 3957564 - 3958268 + | 3-oxoacid CoA-transferase, A subunit TERM 4009 3958465 - 3958425 - g 100 -13.4 -4.5442 | gap 1 GCTGCAATCAGAAAA TGGCCTACTCGGCATGGGA GAAT TCCCA-ACCGAGGAGACCA TAGATGCAGACTTAA TERM 4010 3958512 - 3958524 + G 87 -7.7 -4.91109 | opp_overlap 3958481, overlap 3958505 3958505 AACTGTTACCGCCGT TGACG GTG CGTCA TTTTTCTCATCGGCG Swoo_3229 3958282 - 3958938 + | 3-oxoacid CoA-transferase, B subunit TERM 4011 3959004 - 3958978 - f 100 -11.7 -5.06414 | gap 1, opp_overlap 3958978 GTTTCTGAATAAAAA CGCCCA-CAAGA TTCA TCTTGCTGGGCG TTTTTTATATGACAT TERM 4012 3958978 - 3959004 + F 100 -11.7 -5.37043 | gap 1, opp_overlap 3958978 GTTTCTGAATAAAAA CGCCCA-CAAGA TTCA TCTTGCTGGGCG TTTTTTATATGACAT Swoo_3230 3959201 - 3959764 + | methylation site containing protein Swoo_3231 3960243 - 3959761 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Swoo_3232 3960399 - 3960836 + | hypothetical protein Swoo_3233 3961555 - 3960977 - | thymidine kinase TERM 4013 3961649 - 3961633 - R 100 -13.7 -4.98531 | opp_overlap 3961621 3961633 GCTTGAAATGAAAAA GCCGCTC ATT GAGCGGC TTCTCTATCTACATT TERM 4014 3961633 - 3961649 + r 100 -13.7 -3.65314 | opp_overlap 3961633, overlap 3961621 GCTTGAAATGAAAAA GCCGCTC ATT GAGCGGC TTCTCTATCTACATT Swoo_3234 3963243 - 3961669 - | Na+/H+ antiporter NhaC TERM 4015 3961833 - 3961861 + g 75 -8.9 -3.59262 | opp_overlap 3961826 3961827, overlap 3961834 GGGCATAAGGGAGCT GTGTCACCACATG ATC CATATGGTGACAG TTTGCCCCTGTAGAG TERM 4016 3961834 - 3961860 + g 82 -12.4 -2.75343 | opp_overlap 3961826 3961827, overlap 3961833 GGCATAAGGGAGCTG TGTCACCACATG ATC CATATGGTGACA GTTTGCCCCTGTAGA TERM 4017 3962090 - 3962068 - G 80 -8.4 -4.1891 | overlap 3962070 GCCTGCCAATATAAA TAGCACTGCT GGA AGCAGCGCAA ATGGAATATTACCAG TERM 4018 3962088 - 3962070 - G 83 -11 -3.6944 | overlap 3962068 CTGCCAATATAAATA GCACTGCT GGA AGCAGCGC AAATGGAATATTACC TERM 4019 3963226 - 3963214 - G 72 -10.5 -2.97297 | opp_overlap 3963214, overlap 3963213 AGGTAGCAATGAAAG CGCCG AAT CGGCG TAACTTAAAGTTGTC TERM 4020 3963214 - 3963226 + g 70 -10.5 -2.55551 | opp_overlap 3963214 3963213 AGGTAGCAATGAAAG CGCCG AAT CGGCG TAACTTAAAGTTGTC TERM 4021 3963653 - 3963614 - R 100 -15.9 -4.87786 | opp_overlap 3963619, overlap 3963616 TGAAGCTCATAAAAA CATAAGCGGCTTTGAGG ATTCTA CCCCAAAGCCGCTTATC GTGACCAACATCACA TERM 4022 3963651 - 3963616 - R 100 -18.5 -4.05669 | opp_overlap 3963619, overlap 3963614 AAGCTCATAAAAACA TAAGCGGCTTTGAGG ATTCTA CCCCAAAGCCGCTTA TCGTGACCAACATCA TERM 4023 3963619 - 3963648 + r 100 -13.6 -3.40403 | opp_overlap 3963616 3963614 CTCATAAAAACATAA GCGGCTTTGAGG ATTCTA CCCCAAAGCCGC TTATCGTGACCAACA Swoo_3235 3964658 - 3963735 - | electron transfer flavoprotein alpha subunit Swoo_3236 3965407 - 3964658 - | electron transfer flavoprotein alpha/beta-subunit TERM 4024 3965991 - 3965979 - g 90 -9.1 -4.66163 | ATCTGCACCTAAAAA GCGTG CTC CACGC CCGGCTAAATACACT Swoo_3237 3965722 - 3966117 + | histone family protein nucleoid-structuring protein H-NS TERM 4025 3966167 - 3966142 - f 76 -10.5 -2.58999 | opp_overlap 3966148, overlap 3966148 GTTTTATATACTAAT TAAAAACCGGC TTAT GCCGGTTTTTT TGTAGTTGAAAGATA TERM 4026 3966161 - 3966148 - f 91 -9.5 -4.91873 | opp_overlap 3966148, overlap 3966142 TATACTAATTAAAAA CCGGC TTAT GCCGG TTTTTTTGTAGTTGA TERM 4027 3966148 - 3966161 + F 100 -9.5 -5.71983 | opp_overlap 3966148 3966142 TATACTAATTAAAAA CCGGC TTAT GCCGG TTTTTTTGTAGTTGA TERM 4028 3969229 - 3969217 - g 76 -4.1 -5.17576 | overlap 3969220 CATTAATTCAAAAAA TACTC GCG GAGCA AAATAGTGATAAGTC Swoo_3238 3966282 - 3969347 + | amidohydrolase Swoo_3239 3969347 - 3970654 + | hypothetical protein TERM 4029 3970644 - 3970664 + F 76 -9.1 -3.85698 | opp_overlap 3970648, overlap 3970648 TTTATCAAAAGTACC TAAAGCGAT AGA ATCGCTTTG TTTATACCCAAACAA TERM 4030 3970648 - 3970660 + F 83 -7.7 -4.55295 | opp_overlap 3970648, overlap 3970644 TCAAAAGTACCTAAA GCGAT AGA ATCGC TTTGTTTATACCCAA TERM 4031 3970660 - 3970648 - f 72 -7.7 -3.76411 | opp_overlap 3970644 3970648 TCAAAAGTACCTAAA GCGAT AGA ATCGC TTTGTTTATACCCAA TERM 4032 3970928 - 3970973 + F 83 -11.4 -3.1505 | opp_overlap 3970935 3970949 3970971, overlap 3970971 TCTTGAGGTCGCTTG GGTATAATTGCACCATAAAA ACAGCA TTTTATGGTGCAATAAAGCC TTAATAACGGCTCCT TERM 4033 3970966 - 3970935 - f 100 -13.3 -3.28712 | opp_overlap 3970928, overlap 3970949 GTCGCTTGGGTATAA TTGCACCATAAAA ACAGCA TTTTATGGTGCAA TAAAGCCTTAATAAC Swoo_3240 3971029 - 3971412 + | putative lipoprotein Swoo_3241 3971436 - 3972158 + | hypothetical protein Swoo_3242 3972170 - 3972784 + | hexapaptide repeat-containing transferase TERM 4034 3974646 - 3974632 - g 78 -11.4 -2.90723 | CGATGGCCAATTATA CTGGCG CGA CGCCAG CGGCAAAGTCATTCC Swoo_3243 3973349 - 3975823 + | peptidase S9 prolyl oligopeptidase TERM 4035 3975841 - 3975874 + T 100 -14.8 -4.39375 | opp_overlap 3975845, overlap 3975845 TAATATTGCATTTGT TAAAGCCCTGTACT CGAAAA AGTACGGGGCTTTA TTATTTTGGTTTACT TERM 4036 3975845 - 3975870 + T 91 -11.2 -4.71463 | opp_overlap 3975845, overlap 3975841 ATTGCATTTGTTAAA GCCCTGTACT CGAAAA AGTACGGGGC TTTATTATTTTGGTT TERM 4037 3975870 - 3975845 - T 80 -9.7 -3.55563 | opp_overlap 3975841 3975845 ATTGCATTTGTTAAA GCCCTGTACTC GAAA AAGTACGGGGC TTTATTATTTTGGTT Swoo_3244 3976484 - 3976047 - | hypothetical protein Swoo_3245 3976781 - 3976527 - | hypothetical protein Swoo_3246 3977359 - 3976877 - | hypothetical protein Swoo_3247 3978277 - 3977489 - | peptidase S1 and S6 chymotrypsin/Hap Swoo_3248 3978811 - 3978440 - | hypothetical protein TERM 4038 3978652 - 3978667 + g 80 -9 -4.0641 | CACCTAGTCTGCGTA GCGACT TCAA AGTCGC TTTATATACATCAGA Swoo_3249 3981577 - 3978923 - | type III restriction protein res subunit TERM 4039 3979402 - 3979422 + g 71 -4.1 -4.77759 | GCAGATAAAGGAAAA CAGTTTTAA TGA TTGAAATTG TTTTTGGTAACTTAT TERM 4040 3981659 - 3981673 + r 75 -8.5 -3.79419 | opp_overlap 3981645 3981658, overlap 3981658 ATCGCTGGGATTAAC GCCGC GATTA GCGGC TGTTTTGTGCGCAAC Swoo_3250 3982021 - 3981731 - | hypothetical protein TERM 4041 3982512 - 3982486 - g 76 -3.7 -5.0916 | gap 1, overlap 3982488 3982490 CTTTCAACACAAAAA GA-GACCCCTGC TGAT GCAGAGGTGATC AGTCATCAATTAATG TERM 4042 3982509 - 3982488 - g 70 -6.5 -4.17211 | overlap 3982486 3982490 TTCAACACAAAAAGA GACCCCTGC TGAT GCAGAGGTG ATCAGTCATCAATTA TERM 4043 3982507 - 3982490 - g 75 -9.1 -3.66691 | overlap 3982488 3982486 CAACACAAAAAGAGA CCCCTGC TGAT GCAGAGG TGATCAGTCATCAAT TERM 4044 3983387 - 3983371 - g 75 -8.7 -3.81027 | opp_overlap 3983370 CTTAACGAAGTTAAA GCTGAGA AGA TCCCAGC CGTTCATGCACCTTT Swoo_3251 3982450 - 3984159 + | prolyl-tRNA synthetase TERM 4045 3984207 - 3984232 + T 100 -16.3 -5.09895 | opp_overlap 3984207 3984210, overlap 3984229 TTCTAGATATATTAA TAACGCCACTC AACT GAGTGGCGTTA TTTTTTACATAACTA TERM 4046 3984232 - 3984207 - T 100 -16.3 -3.35197 | opp_overlap 3984207 3984229, overlap 3984210 TTCTAGATATATTAA TAACGCCACTC AACT GAGTGGCGTTA TTTTTTACATAACTA TERM 4047 3984229 - 3984210 - T 100 -13.6 -3.81089 | opp_overlap 3984207, overlap 3984207 TAGATATATTAATAA CGCCACTC AACT GAGTGGCG TTATTTTTTACATAA Swoo_3252 3985880 - 3984297 - | N-acyl-D-amino-acid deacylase Swoo_3253 3987070 - 3985889 - | peptidase M14 carboxypeptidase A Swoo_3254 3989978 - 3987126 - | TonB-dependent receptor TERM 4048 3987209 - 3987224 + g 70 -9 -3.20207 | opp_overlap 3987193 3987208 CGTGGGCTAACTCAT CAGCCA AAGG TGGCTG TTCGTCAGTGATGTT TERM 4049 3988943 - 3988926 - G 75 -4.9 -4.84017 | gap 1, overlap 3988927 3988928 AATTTCTGAGAAAAA CTCGAGTG AAT CACTC-AG ATCATGGGTAGCGTA TERM 4050 3991864 - 3991880 + G 79 -11.5 -3.00525 | overlap 3991876 GTCCCCGCGTCACTT GCCGCCG CCA TGGCGGC TATCCTTTGGGCCGC Swoo_3255 3990193 - 3991917 + | Na+/H+ antiporter NhaC TERM 4051 3992135 - 3992121 - g 84 -8.5 -4.30978 | TTCAACCGAGTAAAA GGGCG ATTGA CGCCC ACCGAAGAAGCAAAA Swoo_3256 3991965 - 3992843 + | LysR family transcriptional regulator Swoo_3257 3992965 - 3994044 + | hypothetical protein TERM 4052 3994448 - 3994426 - g 80 -6.3 -4.77157 | gap 1, overlap 3994428 3994429 TTAATTTACCAAAAA CACGCGCTGT GATC ACAGCGCA-G ACCTTGAGTATCGAC TERM 4053 3994447 - 3994428 - g 82 -10 -3.9993 | overlap 3994426 3994429 AATTTACCAAAAACA CGCGCTGT GATC ACAGCGCA GACCTTGAGTATCGA TERM 4054 3994446 - 3994429 - g 79 -11.3 -2.98873 | overlap 3994428 3994426 ATTTACCAAAAACAC GCGCTGT GATC ACAGCGC AGACCTTGAGTATCG Swoo_3258 3994041 - 3995108 + | mandelate racemase/muconate lactonizing protein TERM 4055 3995105 - 3995126 + T 75 -8.1 -3.73224 | opp_overlap 3995104 3995120, overlap 3995120 TCAACTAATCAAACT TTAGCCCTT ATTT AAGGGTTAA TTTAGTCACAAATAA Swoo_3259 3997299 - 3995167 - | hypothetical protein TERM 4056 3995506 - 3995486 - G 80 -9.1 -4.08216 | opp_overlap 3995485 3995486 TCACTGTTTTCAAAA GCATCAAAA AGT TTTTGACGC GTTTTACGCCCTTGC TERM 4057 3996187 - 3996173 - G 73 -5 -4.68724 | TGATCGAATATAAAA TTACCC ATG GAGTAA GCAATCAAGTGGTTT TERM 4058 3997304 - 3997330 + H 79 -8.2 -4.13767 | opp_overlap 3997304 3997309 TTAATCGACATAGGA GTTAATAATTAC GTT GTTATTATTAAC TTTTACCATAAAAGA Swoo_3260 3997555 - 3998682 + | patatin Swoo_3261 3999452 - 3998700 - | hypothetical protein TERM 4059 3999505 - 3999474 - R 100 -8.8 -5.26875 | opp_overlap 3999474, overlap 3999456 3999455 CCTTTAACGAAAAAA GCAAAGCACTAG GGAGTAAA CTAGGGCTTTGC TTTTTAATTCTAACT TERM 4060 3999474 - 3999505 + r 91 -8.8 -4.93968 | opp_overlap 3999456 3999455 3999474 CCTTTAACGAAAAAA GCAAAGCACTAG GGAGTAAA CTAGGGCTTTGC TTTTTAATTCTAACT Swoo_3262 4001368 - 3999533 - | hypothetical protein Swoo_3263 4003445 - 4001484 - | sodium/hydrogen exchanger TERM 4061 4002726 - 4002714 - G 71 -4.7 -4.69664 | CATACCAGCCAAAAA GGCCC CAA GCGCC ATTGAGAGGCCTAAC TERM 4062 4003571 - 4003587 + H 74 -5.9 -4.56978 | overlap 4003573 GTATATTGCTTGTAT TTCTCTA TTG TAGAGGA TTTATTATTTAAACA TERM 4063 4004105 - 4004093 - g 74 -3.3 -5.12707 | CGAAAGTTTAAAAAA GGCCA TTG CGACC TCTAGTCGACATGAT Swoo_3264 4003629 - 4004510 + | diguanylate cyclase Swoo_3265 4005919 - 4004507 - | tRNA(Ile)-lysidine synthetase Swoo_3266 4009395 - 4005922 - | DNA polymerase III, alpha subunit TERM 4064 4006413 - 4006390 - G 70 -10.2 -2.64099 | overlap 4006389 CTTGGTCATCATAAC GCGGGTCGCG ACAA CAAGACCCGC CGCCTTCATGGTTTT TERM 4065 4006759 - 4006779 + g 73 -2.6 -5.0538 | AGCACAGATGAGCTT CTCCATAA TGCGC TTATTGAG TTTTTTCAGATCGAC TERM 4066 4008596 - 4008619 + g 70 -6 -4.21676 | overlap 4008599 CTTACTGTCACGTTA CAGCGTTTAG CTAT CTGAACGGTG TTTTCAATCGCTTCT TERM 4067 4008950 - 4008960 + g 72 -6.8 -4.2558 | AATGATTCAACCTGA GGCA AAT TGCC TTTTAATAGAGCCTG Swoo_3267 4010145 - 4009504 - | ribonuclease H Swoo_3268 4011302 - 4010148 - | lipid-A-disaccharide synthase TERM 4068 4011451 - 4011430 - R 95 -12.3 -4.15066 | opp_overlap 4011429 4011432 TAGGCATAAAGTAAA GAGCCCGTC TATC AACGGGCTC CTATAGTTACAACTT Swoo_3269 4012245 - 4011478 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 4069 4011586 - 4011602 + g 72 -9.5 -3.25079 | overlap 4011585 CTCTTCAACTGTGTG CCCTTTA CGA TAAAGGG TCTTATACGCTCTTC Swoo_3270 4012700 - 4012242 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Swoo_3271 4013755 - 4012730 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase TERM 4070 4013617 - 4013579 - G 86 -12.6 -3.25823 | gap 1, opp_overlap 4013579 4013581 4013582, overlap 4013581 4013582 TTTTGGTGAGATCAA CACCGCGCTC-GCTTGA GTCGTT TCAAGCTGAGCGCGATA TTTAGGGTTCGCTAA TERM 4071 4013579 - 4013617 + g 75 -8.9 -3.6715 | gap 1, opp_overlap 4013579 4013581 4013582, overlap 4013581 4013582 TTTTGGTGAGATCAA CACCGCGCTC-GCTTGAG TCGT TTCAAGCTGAGCGCGATA TTTAGGGTTCGCTAA TERM 4072 4013615 - 4013581 - G 91 -13 -3.19602 | gap 1, opp_overlap 4013581 4013579 4013582, overlap 4013579 4013582 TTGGTGAGATCAACA CCGCGCTC-GCTTGA GTCGTT TCAAGCTGAGCGCGA TATTTAGGGTTCGCT TERM 4073 4013581 - 4013615 + g 83 -11.5 -3.4149 | gap 1, opp_overlap 4013579 4013581 4013582, overlap 4013579 4013582 TTGGTGAGATCAACA CCGCGCTC-GCTTGAG TCGT TTCAAGCTGAGCGCGA TATTTAGGGTTCGCT TERM 4074 4013614 - 4013582 - G 87 -14.3 -2.51547 | gap 1, opp_overlap 4013582 4013581 4013579, overlap 4013581 4013579 TGGTGAGATCAACAC CGCGCTC-GCTTGA GTCGTT TCAAGCTGAGCGCG ATATTTAGGGTTCGC TERM 4075 4013582 - 4013614 + g 89 -15 -2.64412 | gap 1, opp_overlap 4013581 4013579 4013582, overlap 4013581 4013579 TGGTGAGATCAACAC CGCGCTC-GCTTGAG TCGT TTCAAGCTGAGCGCG ATATTTAGGGTTCGC TERM 4076 4013640 - 4013657 + g 72 -6.9 -4.16943 | opp_overlap 4013639 4013641, overlap 4013641 TTCGCTAAAAAAGAG AGCTGCC CTTG GGCAGCA TTTTCCAGTGTCGCG TERM 4077 4013656 - 4013641 - G 78 -10.4 -3.66166 | opp_overlap 4013641 4013640, overlap 4013639 TCGCTAAAAAAGAGA GCTGCC CTTG GGCAGC ATTTTCCAGTGTCGC TERM 4078 4013641 - 4013656 + g 73 -10.4 -3.09844 | opp_overlap 4013639 4013641, overlap 4013640 TCGCTAAAAAAGAGA GCTGCC CTTG GGCAGC ATTTTCCAGTGTCGC Swoo_3272 4014275 - 4013775 - | outer membrane chaperone Skp (OmpH) Swoo_3273 4016820 - 4014337 - | outer membrane protein assembly complex, YaeT protein Swoo_3274 4018237 - 4016852 - | membrane-associated zinc metalloprotease TERM 4079 4018221 - 4018208 - G 70 -6.7 -4.07975 | TAACGCAATGATAAA GGAAC CTAA GTTCC ATAAAAAATCGATCA Swoo_3275 4019444 - 4018257 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Swoo_3276 4020306 - 4019449 - | phosphatidate cytidylyltransferase TERM 4080 4020127 - 4020117 - G 77 -6.8 -4.48987 | GTGCTACAAGCAAAA CACC TAT GGTG ATGGTGAAGCTCCAC Swoo_3277 4021116 - 4020322 - | undecaprenyl diphosphate synthase TERM 4081 4021173 - 4021139 - R 100 -16.6 -3.24976 | opp_overlap 4021137 4021135, overlap 4021143 AACCCTTTAAATAGA CAAACGCCGTGTAG TATACCT CTACACGGCGTCTG AACTCTAGTTTCTTA TERM 4082 4021169 - 4021143 - R 100 -13.8 -4.27886 | opp_overlap 4021137 4021135, overlap 4021139 CTTTAAATAGACAAA CGCCGTGTAG TATACCT CTACACGGCG TCTGAACTCTAGTTT Swoo_3278 4021754 - 4021197 - | ribosome recycling factor Swoo_3279 4022562 - 4021825 - | uridylate kinase TERM 4083 4022631 - 4022598 - R 83 -10.3 -3.71913 | opp_overlap 4022606, overlap 4022596 4022601 4022604 CCGATAGGTAAAATA CGATAAGACCGCAGC GGTT GCTACGGTCTTAGGG GTGCTTGATTAAGGA TERM 4084 4022628 - 4022601 - R 100 -15 -2.95483 | opp_overlap 4022606, overlap 4022598 4022596 4022604 ATAGGTAAAATACGA TAAGACCGCAGC GGTT GCTACGGTCTTA GGGGTGCTTGATTAA TERM 4085 4022625 - 4022604 - R 90 -12.3 -3.60884 | opp_overlap 4022606, overlap 4022601 4022598 4022596 GGTAAAATACGATAA GACCGCAGC GGTT GCTACGGTC TTAGGGGTGCTTGAT Swoo_3280 4023497 - 4022649 - | translation elongation factor Ts TERM 4086 4023403 - 4023425 + g 76 -4 -5.05782 | overlap 4023404 ATCGCTAGTTCGATG TCACCGGCTG TTT CAGTCAGTGC TTTTTTACAGTCCAT TERM 4087 4023577 - 4023544 - R 74 -6 -4.62984 | gap 1, opp_overlap 4023546 TCACTAGATATAAAA CAGGGGC-CAGTCAT GTTAG ATGAGAGGGCCCCTG TTCACCAATCAAGTA Swoo_3281 4024358 - 4023630 - | ribosomal protein S2 Swoo_3282 4024687 - 4025484 + | methionine aminopeptidase, type I TERM 4088 4025498 - 4025540 + F 74 -8.7 -3.695 | gap 1, opp_overlap 4025496 4025497, overlap 4025500 AATCTCAAACAGACT GATGACCTAATCAG-TGC AGCTTTTA GCAACTGATTAGGTCATG TTTAGCGTATTTCAA TERM 4089 4025500 - 4025538 + F 83 -11.3 -3.42373 | gap 1, opp_overlap 4025496 4025497, overlap 4025498 TCTCAAACAGACTGA TGACCTAATCAG-TGC AGCTTTTA GCAACTGATTAGGTCA TGTTTAGCGTATTTC TERM 4090 4025853 - 4025865 + G 71 -4.8 -4.52589 | opp_overlap 4025836 4025844 CTGAAACCGCACTCA GCGA ATATA TCGC TTTTCTATGGGACGC TERM 4091 4026217 - 4026207 - g 72 -5.4 -4.58395 | TTGATGCCTCAAAAA CAGA AGA TCTG GTTGGCCATGGTTTC TERM 4092 4028025 - 4028010 - g 71 -4.7 -4.72986 | overlap 4028013 4028014 TACTGGCAGCAAAAA TCACC ACCATA GGTGA ACGGGCCGAAGACTT Swoo_3283 4025564 - 4028143 + | UTP-GlnB uridylyltransferase, GlnD Swoo_3284 4028317 - 4029141 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 4093 4029203 - 4029176 - f 81 -10 -3.73953 | opp_overlap 4029181, overlap 4029181 ATGACTTCGAGTAAA CAAAATCCCATC TTTT GATGGGATTTTT ATTCTAGTTCCAATC TERM 4094 4029181 - 4029198 + F 100 -9.9 -5.24416 | opp_overlap 4029176 4029181 TTCGAGTAAACAAAA TCCCATC TTTT GATGGGA TTTTTATTCTAGTTC TERM 4095 4029198 - 4029181 - f 93 -9.9 -4.93877 | opp_overlap 4029181, overlap 4029176 TTCGAGTAAACAAAA TCCCATC TTTT GATGGGA TTTTTATTCTAGTTC Swoo_3285 4029691 - 4030035 + | hypothetical protein TERM 4096 4030069 - 4030083 + T 100 -7.1 -5.71712 | opp_overlap 4030069 4030063 GTAATGTAATAAAAA GAGCC TTTGC GGCTC TTTTTTTATGTCAGC TERM 4097 4030083 - 4030069 - T 85 -7.1 -5.13741 | opp_overlap 4030069, overlap 4030063 GTAATGTAATAAAAA GAGCC TTTGC GGCTC TTTTTTTATGTCAGC Swoo_3286 4030960 - 4030127 - | formyltetrahydrofolate deformylase Swoo_3287 4032479 - 4031013 - | phosphotransferase system EIIC TERM 4098 4032196 - 4032182 - GR 86 -7.8 -4.82855 | CACCAAAGCCAAAAA CCGCAC TGA ATGCGG CAATACCTTGATCCC Swoo_3288 4032895 - 4032434 - | flavodoxin/nitric oxide synthase Swoo_3289 4034080 - 4033223 - | pseudouridine synthase TERM 4099 4033362 - 4033399 + g 71 -8.6 -3.49668 | opp_overlap 4033360, overlap 4033364 TGATCGAATGCAAGG CTTTTTGCTATCAACC ACAAAC GGTTTATAGCAAAATG TTCTCTAAAAAATTT TERM 4100 4033364 - 4033397 + g 74 -9.8 -3.31905 | opp_overlap 4033360, overlap 4033362 ATCGAATGCAAGGCT TTTTGCTATCAACC ACAAAC GGTTTATAGCAAAA TGTTCTCTAAAAAAT TERM 4101 4033894 - 4033880 - G 76 -4.2 -5.0538 | CTGCATTGCAAAAAA GCGC TCACGCC GCGC AAGATAAGATCTGTG Swoo_3290 4034387 - 4034070 - | hypothetical protein Swoo_3291 4034513 - 4035526 + | hypothetical protein Swoo_3292 4035523 - 4035912 + | hypothetical protein TERM 4102 4035930 - 4035970 + T 70 -4.8 -4.63932 | gap 2, opp_overlap 4035938, overlap 4035936 4035937 4035938 CCATACTGCCAGATA AAGAAAAA-G-CGCGGCTCC CAT GGAGTCGCGCCCTTTATCTC TTTTGTTAAGCAATC TERM 4103 4035936 - 4035962 + T 89 -10 -4.37721 | opp_overlap 4035938, overlap 4035930 4035937 4035938 TGCCAGATAAAGAAA AAGCGCGGCTCC CAT GGAGTCGCGCCC TTTATCTCTTTTGTT TERM 4104 4035937 - 4035961 + T 95 -13.5 -3.20193 | opp_overlap 4035938, overlap 4035936 4035930 4035938 GCCAGATAAAGAAAA AGCGCGGCTCC CAT GGAGTCGCGCC CTTTATCTCTTTTGT TERM 4105 4035960 - 4035938 - T 100 -14.8 -5.42975 | opp_overlap 4035938 4035937 4035936 4035930 CCAGATAAAGAAAAA GCGCGGCTCC CAT GGAGTCGCGC CCTTTATCTCTTTTG TERM 4106 4035938 - 4035960 + T 100 -17 -2.50489 | opp_overlap 4035938, overlap 4035937 4035936 4035930 CCAGATAAAGAAAAA GCGCGGCTCC CAT GGAGTCGCGC CCTTTATCTCTTTTG TERM 4107 4036192 - 4036216 + T 70 -8.7 -3.09327 | overlap 4036196 TCCTTTTTTCTCCAT GTATCTGTTTA TAA TAAACAGTTAC TCTTCCATGAACTCG TERM 4108 4036196 - 4036212 + T 70 -8.1 -3.38072 | overlap 4036192 TTTTTCTCCATGTAT CTGTTTA TAA TAAACAG TTACTCTTCCATGAA TERM 4109 4036761 - 4036740 - T 100 -13.1 -5.23292 | opp_overlap 4036738 4036737, overlap 4036735 CCAGATAAAAGAAAA GGCATACCT TTTA AGGTATGCC CAATACTTTTTAGCT TERM 4110 4037385 - 4037410 + T 85 -10.5 -4.07885 | AATGGATCTCTTACG CCTTTGTGCGA TATA TCTCACAAAGG TTTTAGCAAGAACTC Swoo_3293 4037850 - 4037503 - | hypothetical protein Swoo_3294 4038484 - 4037837 - | GCN5-related N-acetyltransferase Swoo_3295 4038650 - 4038883 + | hypothetical protein TERM 4111 4039015 - 4039027 + T 81 -10.5 -3.53811 | AATGTTTGAGGGCCT CCCGC AGA GCGGG TTTCAAAGCCCTGGA Swoo_3296 4039514 - 4039152 - | hypothetical protein TERM 4112 4039664 - 4039652 - H 71 -4.1 -4.88067 | AGCGAGTGAGAAAAA TCACC AAT GATGA GTCCTTTAGAACAAG Swoo_3297 4039658 - 4039987 + | hypothetical protein Swoo_3298 4039987 - 4040760 + | hypothetical protein TERM 4113 4041895 - 4041863 - g 72 -7.8 -3.9281 | gap 1, overlap 4041852 AGCAGGTTCAAACAA CCTTAGC-CACTGAC CTTA GTCAATGTGCAAAGG GCGAGGTTTTAGTAA Swoo_3300 4041481 - 4042371 + | 7-cyano-7-deazaguanine reductase TERM 4114 4042422 - 4042396 - T 100 -13.8 -4.94992 | opp_overlap 4042393 4042403 GTAAATGGATAAAAA TAGAGGAGCGGA TTT TCAGCTCCTCTA ACGTCTTACATCACG Swoo_3301 4043341 - 4042433 - | LysR family transcriptional regulator Swoo_3302 4043502 - 4045523 + | beta-lactamase domain-containing protein TERM 4115 4045574 - 4045548 - f 75 -9.5 -3.2218 | opp_overlap 4045548 CCGAAGATGTATTAA GCACAGTTAAC TAATC GTTAGCTGTGC TTTTTTATATATGGG TERM 4116 4045548 - 4045574 + F 100 -11.7 -5.4251 | opp_overlap 4045548 CCGAAGATGTATTAA GCACAGTTAAC TAATC GTTAGCTGTGC TTTTTTATATATGGG Swoo_3303 4045854 - 4047044 + | hypothetical protein TERM 4117 4047116 - 4047135 + T 100 -7.9 -5.79595 | CGCTCCCTCCCTTTT GAGCAGA CTAACC TCTGCTC TTTTTTATTTTAAGC Swoo_3304 4048012 - 4047140 - | 4'-phosphopantetheinyl transferase Swoo_3305 4048602 - 4048165 - | hypothetical protein TERM 4118 4048676 - 4048707 + r 84 -5.8 -5.28983 | opp_overlap 4048665 4048682, overlap 4048682 GAAATTTTTTTACAA AAAAAAGCCACCGA ATTA TCGGTGGCTTTAAA TTTTTATCTTTTACC TERM 4119 4048701 - 4048682 - R 100 -13.6 -5.93809 | opp_overlap 4048682 4048676 TTTTTACAAAAAAAA GCCACCGA ATTA TCGGTGGC TTTAAATTTTTATCT TERM 4120 4048682 - 4048701 + r 100 -13.6 -4.03989 | opp_overlap 4048682, overlap 4048676 TTTTTACAAAAAAAA GCCACCGA ATTA TCGGTGGC TTTAAATTTTTATCT Swoo_3306 4049115 - 4048759 - | sigma 54 modulation protein/ribosomal protein S30EA Swoo_3307 4049707 - 4050006 + | hypothetical protein TERM 4121 4051052 - 4051062 + G 80 -5.4 -5.16841 | GGTTTGCCGAACCTG TGCT CAG AGCA TTTTTCTTCATCTGC Swoo_3308 4050010 - 4051635 + | PepSY-associated TM helix domain-containing protein Swoo_3309 4051639 - 4051983 + | hypothetical protein TERM 4122 4051992 - 4052027 + T 100 -14.2 -3.53811 | opp_overlap 4051993 4051995 4052002, overlap 4051995 4051997 4052002 TTCGTGATAATCCAA ATATAGAAAAGCCGCA CTAT TGCGGCTTTTCTATGC TTTCCAACAGATAAG TERM 4123 4052026 - 4051993 - T 100 -15.5 -3.80625 | opp_overlap 4051992 4051995 4051997 4052002, overlap 4051995 4052002 TCGTGATAATCCAAA TATAGAAAAGCCGCA CTAT TGCGGCTTTTCTATG CTTTCCAACAGATAA TERM 4124 4051995 - 4052024 + T 100 -18.1 -2.90615 | opp_overlap 4051993 4051995 4052002, overlap 4051992 4051997 4052002 GTGATAATCCAAATA TAGAAAAGCCGCA CTAT TGCGGCTTTTCTA TGCTTTCCAACAGAT TERM 4125 4052024 - 4051995 - T 100 -18.1 -3.48766 | opp_overlap 4051995 4051992 4051997 4052002, overlap 4051993 4052002 GTGATAATCCAAATA TAGAAAAGCCGCA CTAT TGCGGCTTTTCTA TGCTTTCCAACAGAT TERM 4126 4051997 - 4052022 + T 100 -16.3 -3.00525 | opp_overlap 4051995 4051993 4052002, overlap 4051995 4051992 4052002 GATAATCCAAATATA GAAAAGCCGCA CTAT TGCGGCTTTTC TATGCTTTCCAACAG TERM 4127 4052002 - 4052017 + T 89 -10.4 -4.6468 | opp_overlap 4052002 4051995 4051993, overlap 4051997 4051995 4051992 TCCAAATATAGAAAA GCCGCA CTAT TGCGGC TTTTCTATGCTTTCC TERM 4128 4052017 - 4052002 - T 91 -10.4 -4.74013 | opp_overlap 4051997 4051995 4051992 4052002, overlap 4051995 4051993 TCCAAATATAGAAAA GCCGCA CTAT TGCGGC TTTTCTATGCTTTCC Swoo_3310 4052452 - 4052075 - | hypothetical protein Swoo_3311 4052598 - 4053491 + | AraC family transcriptional regulator Swoo_3312 4053512 - 4053952 + | OsmC family protein Swoo_3313 4055005 - 4053974 - | response regulator receiver modulated metal dependent phosphohydrolase Swoo_3314 4059766 - 4055018 - | multi-sensor hybrid histidine kinase TERM 4129 4057308 - 4057335 + g 78 -8.5 -4.02817 | TTCTCCAACTGTTTG GCGGCATCAAT ATTCAC ATTGATACCGC TTATTCTTATCGCCC TERM 4130 4059324 - 4059314 - G 81 -2.4 -5.55769 | TGCGATAATAAAAAA GCCC ATG GTGC CAAACGGTTTACTGT TERM 4131 4059801 - 4059789 - R 88 -3.3 -5.75538 | overlap 4059797 CCCAAAAAAGAAAAA GCTAC AGA GTCGC AGAGCGACATCACTA TERM 4132 4060006 - 4059966 - R 86 -7.5 -5.01042 | gap 1, opp_overlap 4059965 4059960 4059967, overlap 4059967 AAGGGAAATCAAAAA TGGGGGTTACTGGCCTGG GAACCG CTTGGCC-GTAACCCCCT AATATGTTCATAACA TERM 4133 4060005 - 4059967 - R 83 -11 -3.58998 | gap 1, opp_overlap 4059965 4059960 4059967, overlap 4059966 AGGGAAATCAAAAAT GGGGGTTACTGGCCTGG GAACCG CTTGGCC-GTAACCCCC TAATATGTTCATAAC TERM 4134 4059967 - 4060005 + r 93 -13.2 -2.77148 | gap 1, opp_overlap 4059967 4059966, overlap 4059965 4059960 AGGGAAATCAAAAAT GGGGGTTACTGGCCTGG GAACCG CTTGGCC-GTAACCCCC TAATATGTTCATAAC Swoo_3315 4063408 - 4060115 - | peptidase S41 TERM 4135 4061914 - 4061889 - G 72 -5.5 -4.52589 | gap 1, overlap 4061891 CGGTCTGAGAGAAAA TATAGCCACTGA CCA TCAG-GGCTAAA TGCGGGTGCATATGA TERM 4136 4061912 - 4061891 - G 72 -8.1 -3.87627 | gap 1, overlap 4061889 GTCTGAGAGAAAATA TAGCCACTGA CCA TCAG-GGCTA AATGCGGGTGCATAT TERM 4137 4062392 - 4062370 - G 77 -9 -3.73068 | overlap 4062371 GTGCTAACTCAACAA GGCGGGAGCC ATC GGTTCCCGCT ATCGCAACATGACTT TERM 4138 4062391 - 4062371 - G 82 -12.5 -2.8352 | overlap 4062370 TGCTAACTCAACAAG GCGGGAGCC ATC GGTTCCCGC TATCGCAACATGACT Swoo_3316 4063562 - 4064038 + | hypothetical protein Swoo_3317 4064954 - 4064115 - | hypothetical protein Swoo_3318 4065570 - 4064944 - | ECF subfamily RNA polymerase sigma-24 factor TERM 4139 4065405 - 4065384 - G 93 -11.7 -3.86194 | opp_overlap 4065374 4065384 4065386 AAGTGTCTTGATAAA GATCTTCAG CCAA CTGAAGATC TCCTATCTGACGAAC TERM 4140 4065384 - 4065405 + g 79 -11.7 -2.69151 | opp_overlap 4065384, overlap 4065374 4065386 AAGTGTCTTGATAAA GATCTTCAG CCAA CTGAAGATC TCCTATCTGACGAAC Swoo_3319 4067522 - 4065600 - | von Willebrand factor type A TERM 4141 4067897 - 4067875 - H 74 -4.8 -4.93968 | overlap 4067878 4067879 ACCTACAAGTAAAAA CAAGGTTCAG TGC CTGAACACCG ACTGAAAACCGTTCC TERM 4142 4067894 - 4067878 - H 70 -5.1 -4.56187 | overlap 4067875 4067879 TACAAGTAAAAACAA GGTTCAG TGC CTGAACA CCGACTGAAAACCGT TERM 4143 4067893 - 4067879 - H 72 -8.6 -3.32085 | overlap 4067878 4067875 ACAAGTAAAAACAAG GTTCAG TGC CTGAAC ACCGACTGAAAACCG TERM 4144 4069358 - 4069370 + G 74 -3.3 -5.03314 | GTCGGTATTGAAAGT CAACG GTC CGCTG TTTTTTGCCGCTGCC Swoo_3320 4067934 - 4069655 + | sulfate transporter TERM 4145 4069689 - 4069714 + F 81 -6.9 -4.71426 | opp_overlap 4069689, overlap 4069684 AAAATCAGTGCAAAA CGCCAGCAA ACTTAAAC TTGCTGGTG TTTTATTAATAAACA Swoo_3321 4069913 - 4070395 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 4146 4070763 - 4070745 - g 70 -7.4 -3.93695 | TTGATCACTGAGAAA CAGCACCT GTT AGATGCCG TGTCCCAGCTCGACT Swoo_3322 4070397 - 4071545 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit TERM 4147 4071612 - 4071581 - T 73 -3.8 -5.06585 | gap 1, opp_overlap 4071581 CAAACTAGATAAAAA GCTGAGTTGATAC CATTGAT GTATCG-CTCAGC TTTTTTTTACTCCTA TERM 4148 4071581 - 4071612 + T 100 -6 -5.88471 | gap 1, opp_overlap 4071581 CAAACTAGATAAAAA GCTGAGTTGATAC CATTGAT GTATCG-CTCAGC TTTTTTTTACTCCTA Swoo_3323 4072161 - 4071625 - | hypothetical protein Swoo_3324 4072951 - 4072334 - | hypothetical protein Swoo_3325 4073478 - 4073041 - | hypothetical protein Swoo_3326 4075106 - 4073478 - | glutamate--cysteine ligase Swoo_3327 4078158 - 4075324 - | peptidase M16 domain-containing protein TERM 4149 4076847 - 4076833 - G 71 -7.8 -3.85362 | opp_overlap 4076832 AATGTAAGTATTAAA GACGCG CAT CACGTC GGCTTTTGTGACATT TERM 4150 4076890 - 4076912 + g 75 -10.6 -2.90075 | opp_overlap 4076894, overlap 4076892 TAAGTCTGAAGCTAT CATATTCGGG TTG CCCGAAAATG TCTGATTAAAGGCCA TERM 4151 4076908 - 4076894 - G 71 -10 -2.82933 | opp_overlap 4076892 4076890 TCTGAAGCTATCATA TTCGGG TTG CCCGAA AATGTCTGATTAAAG Swoo_3328 4078618 - 4078196 - | SNARE associated Golgi protein TERM 4152 4078633 - 4078652 + H 70 -3 -5.10461 | TAAATGCTTACCTAA TGAAAAAT CGTA ATTTTTTA TTTTTATTCGGTGAA Swoo_3329 4078920 - 4080200 + | sodium:dicarboxylate symporter TERM 4153 4080261 - 4080240 - f 100 -14.5 -3.75506 | opp_overlap 4080240 ATAAGTCATCAACAA TCAAGCCGC TTCT GCGGCTTGA TTTGTTCCTAGAGAC TERM 4154 4080240 - 4080261 + F 100 -14.5 -4.24342 | opp_overlap 4080240 ATAAGTCATCAACAA TCAAGCCGC TTCT GCGGCTTGA TTTGTTCCTAGAGAC TERM 4155 4080461 - 4080441 - g 74 -3.4 -5.10077 | gap 1 AAACAGGGTAAAAAA GGCT-TTAT CTAC ATAATAGCC ATCAGTGCAACCATC Swoo_3330 4080348 - 4080533 + | hypothetical protein Swoo_3331 4080651 - 4080986 + | SecC motif-containing protein TERM 4156 4081019 - 4081049 + T 91 -12.9 -2.99545 | opp_overlap 4081019 CCTGCCAAATAAAAA TGTCACTAATTTA ATAAA TAAATTAGTGACA TATCTAGTATCTAAA TERM 4157 4081049 - 4081019 - T 100 -12.9 -5.27335 | opp_overlap 4081019 CCTGCCAAATAAAAA TGTCACTAATTTA ATAAA TAAATTAGTGACA TATCTAGTATCTAAA Swoo_3332 4081262 - 4081077 - | hypothetical protein Swoo_3333 4082139 - 4081552 - | hypothetical protein TERM 4158 4082464 - 4082452 - R 75 -7.7 -4.07568 | CGCCTTTGCCTAAAA CAGCT CTG AGCTG ACTACTTTCTTATAC TERM 4159 4082530 - 4082553 + r 100 -8.8 -5.27923 | opp_overlap 4082530 4082532 TGACGGTTTTAATTA GACCAGTTGC TCTT GCTGCTGGTC TTTTTTATGCACTTG Swoo_3334 4083761 - 4082527 - | transposase TERM 4160 4083487 - 4083511 + g 71 -2.1 -5.0538 | overlap 4083491 CGTAAATGTTCATCC TCAAGCTCTTT TTC AAGGCGCTTTA TTTTTTGAGCTGGCG TERM 4161 4083491 - 4083507 + g 73 -2.9 -5.05153 | overlap 4083487 AATGTTCATCCTCAA GCTCTTT TTC AAGGCGC TTTATTTTTTGAGCT TERM 4162 4083796 - 4083768 - R 86 -9.8 -4.30987 | gap 1, opp_overlap 4083776 AGTTGTCATAATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACACAGATAC TERM 4163 4083818 - 4083834 + r 90 -12.3 -3.71108 | opp_overlap 4083818 CACAGATACAAAAAA GCCCATC AAA GATGGGC TTTAAAATTACTTTT TERM 4164 4083834 - 4083818 - R 100 -12.3 -5.4492 | opp_overlap 4083818 CACAGATACAAAAAA GCCCATC AAA GATGGGC TTTAAAATTACTTTT Swoo_3335 4084990 - 4083860 - | sodium ion-translocating decarboxylase, beta subunit Swoo_3336 4086807 - 4084999 - | oxaloacetate decarboxylase alpha subunit Swoo_3337 4087073 - 4086828 - | sodium pump decarboxylase, gamma subunit TERM 4165 4088020 - 4087999 - R 100 -13.1 -5.4251 | opp_overlap 4087999 TCCAGACACAAAAAA GCCCATTGA TTTC TCAATGGGC TTGATTGATGGCGGA TERM 4166 4087999 - 4088020 + r 100 -13.1 -3.39895 | opp_overlap 4087999 TCCAGACACAAAAAA GCCCATTGA TTTC TCAATGGGC TTGATTGATGGCGGA TERM 4167 4088519 - 4088530 + r 73 -4.4 -5.00027 | AAACAATCCAGTGTA TGAC TCTC GTCA TTTTCTATTTTTAGT TERM 4168 4088699 - 4088719 + r 74 -9.7 -2.63723 | opp_overlap 4088699, overlap 4088698 AGGGCGACAAAAAAA CCCGCTGAT GAT ATCAACGGG CTTGATTGATGGCGG TERM 4169 4088719 - 4088699 - R 100 -11.9 -5.61596 | opp_overlap 4088699 4088698 AGGGCGACAAAAAAA CCCGCTGAT GAT ATCAACGGG CTTGATTGATGGCGG TERM 4170 4089531 - 4089554 + r 70 -6.9 -3.76224 | opp_overlap 4089524 ATATATAAGGGCTAA TCTTTATAC CAATCA GTATAAAGA TTTGATCGCTCAGCG TERM 4171 4089857 - 4089873 + r 83 -10.9 -3.61983 | opp_overlap 4089857 ACAAAAAACAAAAAA GCCAGTT AAT AACTGGC TTCTCTATAAATTCA TERM 4172 4089873 - 4089857 - R 100 -10.9 -6.07374 | opp_overlap 4089857 ACAAAAAACAAAAAA GCCAGTT AAT AACTGGC TTCTCTATAAATTCA Swoo_3338 4090106 - 4089909 - | carbon storage regulator, CsrA TERM 4173 4090524 - 4090542 + r 100 -8.9 -5.24129 | opp_overlap 4090524 TGAAGCACAAAAAAA GCGCTTT AACTA AAAGCGC TTTTTTATCGGGAAA TERM 4174 4090542 - 4090524 - R 100 -8.9 -5.71983 | opp_overlap 4090524 TGAAGCACAAAAAAA GCGCTTT AACTA AAAGCGC TTTTTTATCGGGAAA Swoo_3339 4093196 - 4090572 - | alanyl-tRNA synthetase TERM 4175 4093437 - 4093413 - R 100 -16.5 -3.86935 | CAATCAGTATAATAA TCGCGGTGGCA AGA TACCACCGCGA GATAGTGAGCGTGAG Swoo_3340 4094549 - 4093488 - | recA protein TERM 4176 4094923 - 4094912 - g 70 -3 -4.91459 | CAAGATTTAGAAAAA CATA CCCC TATG ATGCGTCAGTATTTG TERM 4177 4096270 - 4096256 - g 80 -5.6 -5.10767 | GAGGCAAGAGAAAAA GAGGCC ACT GGCATC TCGACGCTAAAAGTC TERM 4178 4097378 - 4097360 - g 74 -6.7 -4.41548 | CCAGACCCTATAAAA TCACCTC TTGAG GAGGCGA TGGAATCAATCAGGC Swoo_3341 4094879 - 4097455 + | DNA mismatch repair protein MutS TERM 4179 4097514 - 4097484 - T 87 -12 -3.0362 | opp_overlap 4097485 4097491, overlap 4097491 TCTAAATATCAGACA TTAAAAAGCGCACA TAA CGTGCGCTTTTTAT CTCTTATTTGGCGTA TERM 4180 4097485 - 4097513 + T 100 -14.8 -3.35054 | opp_overlap 4097484 4097491, overlap 4097491 CTAAATATCAGACAT TAAAAAGCGCAC ATAAC GTGCGCTTTTTA TCTCTTATTTGGCGT TERM 4181 4097507 - 4097491 - T 91 -10.1 -4.85129 | opp_overlap 4097485 4097491, overlap 4097484 ATCAGACATTAAAAA GCGCACA TAA CGTGCGC TTTTTATCTCTTATT TERM 4182 4097491 - 4097507 + T 91 -9.4 -5.1383 | opp_overlap 4097491 4097484, overlap 4097485 ATCAGACATTAAAAA GCGCAC ATAAC GTGCGC TTTTTATCTCTTATT Swoo_3342 4098634 - 4097666 - | RpoD family RNA polymerase sigma factor Swoo_3343 4099608 - 4098712 - | peptidase M23B Swoo_3344 4100340 - 4099705 - | protein-L-isoaspartate O-methyltransferase Swoo_3345 4101086 - 4100337 - | stationary-phase survival protein SurE Swoo_3346 4102196 - 4101129 - | tRNA pseudouridine synthase D TruD TERM 4183 4101622 - 4101650 + g 80 -6.7 -4.78029 | opp_overlap 4101612 TAAGATCGAACAGCC GACAGGTAGATAC TGC GTTTCTTTCTGTC TTTTACTTTTCTTCC Swoo_3347 4102754 - 4102275 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Swoo_3348 4103521 - 4102829 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Swoo_3349 4103853 - 4103554 - | septum formation initiator TERM 4184 4103913 - 4103930 + r 73 -6.9 -4.14392 | opp_overlap 4103913 GATAGTAACAAAAAA GGCCACC AAAT GGTGACC TTTTCAAGCTTAGCA TERM 4185 4103930 - 4103913 - R 100 -9.1 -5.5353 | opp_overlap 4103913 GATAGTAACAAAAAA GGCCACC AAAT GGTGACC TTTTCAAGCTTAGCA Swoo_3350 4105302 - 4104007 - | phosphopyruvate hydratase TERM 4186 4105498 - 4105474 - R 100 -16.5 -5.4251 | opp_overlap 4105471 4105470 4105468 TCCATAGACAAAAAA GCCGCTCCCTA AAA TAGGAAGCGGC TGAGTATTTGGTATT Swoo_3351 4107149 - 4105512 - | CTP synthase Swoo_3352 4108062 - 4107274 - | MazG family protein TERM 4187 4107484 - 4107504 + g 77 -4.7 -5.1356 | overlap 4107482 4107485 ATCTCCCATCTCATC CTGAACCTT ATC AGGGTTCAC TTTTTCTTGCTCAAC TERM 4188 4108135 - 4108106 - R 85 -10.1 -4.07885 | opp_overlap 4108112, overlap 4108107 4108112 TAGTTGGTCTTAAAA TGAAAATGACGAC CTAA GTCGCCATTTTCT AGAGGTCATTAAAGC TERM 4189 4108134 - 4108107 - R 95 -13.6 -3.04517 | opp_overlap 4108112, overlap 4108106 4108112 AGTTGGTCTTAAAAT GAAAATGACGAC CTAA GTCGCCATTTTC TAGAGGTCATTAAAG TERM 4190 4108129 - 4108112 - R 83 -7.7 -4.67038 | opp_overlap 4108112, overlap 4108107 4108106 GTCTTAAAATGAAAA TGACGAC CTAA GTCGCCA TTTTCTAGAGGTCAT Swoo_3353 4110351 - 4108144 - | (p)ppGpp synthetase I, SpoT/RelA TERM 4191 4109848 - 4109860 + g 75 -4.8 -4.74504 | CAGCAGTACCCGCGT CTCC TCATC GGAG TTTTTCACTTCACGT TERM 4192 4110408 - 4110384 - R 72 -7.9 -3.8125 | overlap 4110382 CTTTGAATCAAAATA TGTGCTACAAA AAT CCTGCAGCACA AATCAATAATATAGC Swoo_3354 4111850 - 4110519 - | RNA methyltransferase TERM 4193 4111881 - 4111908 + H 76 -9.8 -3.14125 | opp_overlap 4111886, overlap 4111880 4111884 AATAATAATACTGGC CAAGACTGCCTG ACTT CTGGCAGTCTAG TGTTAACTGTGTCAA TERM 4194 4111884 - 4111905 + H 74 -10.1 -2.77232 | opp_overlap 4111886, overlap 4111881 4111880 AATAATACTGGCCAA GACTGCCTG ACTT CTGGCAGTC TAGTGTTAACTGTGT TERM 4195 4113687 - 4113671 - gH 83 -10.9 -3.41416 | overlap 4113669 4113665 TGAAAACAACCAATA TTGGCTC AAC GAGCCAA CTTGCAGAGTGCTCA Swoo_3355 4111948 - 4114761 + | multi-sensor hybrid histidine kinase Swoo_3356 4114736 - 4115341 + | hypothetical protein TERM 4196 4115330 - 4115349 + F 79 -8.6 -4.00868 | opp_overlap 4115332 ATAGGTGTAGGAATG CAGGAAGG CTAA CCTTTCTG TTTAATTATGCGTAA Swoo_3357 4115357 - 4115593 + | hypothetical protein TERM 4197 4115627 - 4115594 - f 79 -8.9 -4.14807 | opp_overlap 4115596, overlap 4115595 AATACAACGAAATAA GTTTAGGCTGAGCAA ACTC CTGCTCAGCCTAATT TTCTTTTATCATAAA TERM 4198 4115626 - 4115595 - f 87 -12.4 -3.07257 | opp_overlap 4115596, overlap 4115594 ATACAACGAAATAAG TTTAGGCTGAGCAA ACTC CTGCTCAGCCTAAT TTTCTTTTATCATAA TERM 4199 4115596 - 4115625 + F 100 -15.2 -5.20781 | opp_overlap 4115595 4115594 TACAACGAAATAAGT TTAGGCTGAGCA AACTCC TGCTCAGCCTAA TTTTCTTTTATCATA Swoo_3358 4115720 - 4116697 + | auxin efflux carrier TERM 4200 4116824 - 4116775 - f 83 -11.2 -3.50447 | gap 2, opp_overlap 4116780 4116795, overlap 4116776 TTAATTTTCACACAA GGCTTTACTGTATTTATGAACAGT ATAT ACTGTTCATAAATACAGTAC--CC AAAGTGAAGGGGTCT TERM 4201 4116824 - 4116776 - f 81 -11.4 -2.69947 | gap 1, opp_overlap 4116780 4116795, overlap 4116775 TAATTTTCACACAAG GCTTTACTGTATTTATGAACAGT ATAT ACTGTTCATAAATACAGTACC-C AAAGTGAAGGGGTCT TERM 4202 4118209 - 4118194 - g 80 -5.4 -5.03715 | opp_overlap 4118194 ATCACCGCGAAAAAA GTATCG ACAC CGACAC TGATTTTTGACGAAG Swoo_3359 4116844 - 4118505 + | DNA repair protein RecN TERM 4203 4118543 - 4118563 + F 100 -14.7 -3.39449 | opp_overlap 4118538 ATTAATCACACTTTA GCGGGCATC ACC GGTGCCCGC TTACTCTTCCTCAGC Swoo_3360 4118704 - 4119423 + | hypothetical protein Swoo_3361 4121747 - 4119438 - | peptidase S45 penicillin amidase Swoo_3362 4122127 - 4121861 - | hypothetical protein Swoo_3363 4122304 - 4122555 + | hypothetical protein TERM 4204 4122572 - 4122558 - T 91 -9.2 -4.87803 | opp_overlap 4122558 4122554 CAGCTTTAAATAAAA GGGCCA AAA CGGCCC TTAATTTTATTCGGT TERM 4205 4122558 - 4122572 + T 75 -8.5 -3.82864 | opp_overlap 4122558, overlap 4122554 CAGCTTTAAATAAAA GGGCC AAAAC GGCCC TTAATTTTATTCGGT Swoo_3364 4123588 - 4122590 - | alcohol dehydrogenase Swoo_3365 4123752 - 4124237 + | MarR family transcriptional regulator Swoo_3366 4124456 - 4125541 + | spermidine/putrescine-binding periplasmic protein-like protein Swoo_3367 4125643 - 4125912 + | hypothetical protein Swoo_3368 4126009 - 4126416 + | glyoxalase/bleomycin resistance protein/dioxygenase Swoo_3369 4126434 - 4126724 + | antibiotic biosynthesis monooxygenase Swoo_3370 4127038 - 4127583 + | hypothetical protein TERM 4206 4127618 - 4127589 - T 91 -8.7 -5.00234 | gap 1, overlap 4127591 TAAAAAATAAAGAAA TATCGAGGTGGCTA AAA TAGC-ACCTCGAAA AATTAAGTTAAAATA TERM 4207 4127616 - 4127591 - T 86 -11.3 -4.05342 | gap 1, overlap 4127589 AAAAATAAAGAAATA TCGAGGTGGCTA AAA TAGC-ACCTCGA AAAATTAAGTTAAAA Swoo_3371 4128280 - 4127657 - | FMN-binding negative transcriptional regulator Swoo_3372 4128888 - 4128280 - | GCN5-related N-acetyltransferase TERM 4208 4128629 - 4128613 - G 74 -10.9 -2.52543 | opp_overlap 4128606 ATCGCGCCTAATTGA GCAGTAC CGA GTACTGC CTATCACCTTTTGAC TERM 4209 4128690 - 4128702 + g 72 -3.3 -4.96848 | GGTTACCTAACTCCT GCTCT ACA AGCGC TTTTTCTATCCAAGC TERM 4210 4129636 - 4129646 + G 70 -5.4 -4.32034 | CTAGGCTACCGGCCT GCAT GGA ATGC TTTTACTACTGCTGG Swoo_3373 4128979 - 4130433 + | transcriptional regulator Swoo_3374 4131846 - 4130506 - | amidohydrolase TERM 4211 4131968 - 4131985 + r 73 -8.4 -3.54741 | opp_overlap 4131968 AGAGGGCATAAAAAA CGCAGC ACTATG GCTGCG TTTCCCCCAGTGATC TERM 4212 4131985 - 4131968 - R 100 -8.4 -5.26918 | opp_overlap 4131968 AGAGGGCATAAAAAA CGCAGC ACTATG GCTGCG TTTCCCCCAGTGATC Swoo_3375 4134504 - 4132030 - | TonB-dependent receptor plug TERM 4213 4134022 - 4134010 - G 71 -9.1 -3.34962 | opp_overlap 4134008 TCCCATACCGTATAA CCCTG TTG CAGGG CCCTTTAGCACCTCA TERM 4214 4134675 - 4134688 + r 83 -8.1 -4.38712 | opp_overlap 4134675 ATCAGATACAAAAAA GGCGT ATAA ACGCC TTTTATACCAATCAG TERM 4215 4134688 - 4134675 - R 100 -8.1 -5.43414 | opp_overlap 4134675 ATCAGATACAAAAAA GGCGT ATAA ACGCC TTTTATACCAATCAG Swoo_3376 4135258 - 4134725 - | OmpA domain-containing protein Swoo_3377 4135856 - 4135392 - | hypothetical protein TERM 4216 4135924 - 4135899 - R 100 -17.7 -4.17537 | opp_overlap 4135904, overlap 4135904 TCAAATAAGCATAAA CCAAAGCCGAC AGAG GTCGGCTTTGG AAGATAGGCTTAGAC TERM 4217 4135904 - 4135919 + r 81 -10.4 -3.55563 | opp_overlap 4135899 4135904 TAAGCATAAACCAAA GCCGAC AGAG GTCGGC TTTGGAAGATAGGCT TERM 4218 4135919 - 4135904 - R 85 -10.4 -4.17789 | opp_overlap 4135904, overlap 4135899 TAAGCATAAACCAAA GCCGAC AGAG GTCGGC TTTGGAAGATAGGCT Swoo_3378 4136871 - 4135954 - | hypothetical protein Swoo_3379 4137165 - 4137500 + | peptidase Swoo_3380 4137535 - 4138227 + | two component transcriptional regulator Swoo_3381 4138237 - 4139637 + | integral membrane sensor signal transduction histidine kinase Swoo_3382 4139724 - 4141190 + | hypothetical protein Swoo_3384 4143731 - 4141650 - | transcriptional regulator, CadC TERM 4219 4142567 - 4142580 + g 71 -5.3 -4.44915 | overlap 4142557 GATACTCACTGGAGT GGTTA TCGA TAACC TTTTCTAACTCCTTA TERM 4220 4144658 - 4144644 - g 79 -5 -5.0538 | TTGTACTTGAAAAAA CACTCT CAG AGAATG CTGCTATCACCTTAG Swoo_3385 4143875 - 4145266 + | FG-GAP repeat-containing protein TERM 4221 4145337 - 4145299 - T 93 -14 -2.78725 | opp_overlap 4145299, overlap 4145296 AGAGCCTATTAATCA CCCAGCCTCTGTCTATGT ACA ATATAGACAGAGGTTGAG TTTCTACTTAGTTTT TERM 4222 4145299 - 4145337 + T 100 -16.2 -4.12841 | opp_overlap 4145296 4145299 AGAGCCTATTAATCA CCCAGCCTCTGTCTATGT ACA ATATAGACAGAGGTTGAG TTTCTACTTAGTTTT Swoo_3386 4145793 - 4145374 - | GCN5-related N-acetyltransferase Swoo_3387 4146372 - 4145818 - | hypothetical protein TERM 4223 4146869 - 4146890 + r 70 -8.1 -3.22388 | overlap 4146887 ACTTATTGGTTATAG CGCATTTTT GAAC AGAAATGCG TTAGTGCATTGAGTC Swoo_3388 4147885 - 4146998 - | hypothetical protein Swoo_3389 4148260 - 4149183 + | hypothetical protein Swoo_3390 4149697 - 4149251 - | hypothetical protein Swoo_3391 4150232 - 4149798 - | YobK Swoo_3392 4150871 - 4150356 - | hypothetical protein Swoo_3393 4151540 - 4150962 - | CRP/FNR family transcriptional regulator TERM 4224 4151721 - 4151732 + H 71 -4.4 -4.75288 | overlap 4151700 TATGATTCATTCAAT CGAT AAAG ATCG TTTCTTTTAATCTCC TERM 4225 4152110 - 4152123 + G 74 -2.3 -5.25906 | opp_overlap 4152107 ATTTGCCGAAAAGGG CAAGG TCAC CCCTG TTTTTGTTCGTTTCT Swoo_3394 4151808 - 4153319 + | catalase Swoo_3395 4153523 - 4154086 + | ankyrin Swoo_3396 4155786 - 4154167 - | endonuclease I Swoo_3397 4157353 - 4156034 - | coproporphyrinogen dehydrogenase TERM 4226 4156709 - 4156728 + g 78 -8.6 -4.08767 | opp_overlap 4156715 CTTTAAATCCCAGTG CACAGACT CAGG GGTCTGTG TTTTAAACCCATACA TERM 4227 4157868 - 4157888 + G 70 -6.9 -4.08767 | opp_overlap 4157868, overlap 4157886 GCGGTTGAGCATAAA GCTGATAAC AAG GTTATTGGC TTTTGCGGGCCTACC Swoo_3398 4157655 - 4158155 + | GCN5-related N-acetyltransferase Swoo_3399 4159732 - 4158152 - | methyl-accepting chemotaxis sensory transducer TERM 4228 4159910 - 4159893 - R 100 -9.1 -5.70829 | opp_overlap 4159893 4159892 AATAGCAGAAAAAAA CGCAACC CTAT GGCTGCG CTTTCTCTATTTAGT Swoo_3400 4161157 - 4159940 - | NADH:ubiquinone oxidoreductase, subunit F Swoo_3401 4161824 - 4161216 - | NADH:ubiquinone oxidoreductase, subunit E Swoo_3402 4162457 - 4161834 - | NADH:ubiquinone oxidoreductase, subunit D Swoo_3403 4163229 - 4162459 - | NADH:ubiquinone oxidoreductase, subunit C Swoo_3404 4164573 - 4163359 - | NADH:ubiquinone oxidoreductase, subunit B Swoo_3405 4165943 - 4164573 - | NADH:ubiquinone oxidoreductase, subunit A TERM 4229 4164797 - 4164787 - G 72 -6.8 -4.26903 | TCTAGCTGACCAAAA GCCA TCA TGGC ACGTGCAGAACCACC TERM 4230 4165881 - 4165895 + g 71 -4.2 -4.82518 | AGGCTCACCGGCAAT GGGC ACGTCCA GCCC TTTTGTTACTGTTTT TERM 4231 4166138 - 4166118 - R 100 -8.3 -5.31275 | opp_overlap 4166120 TTTTATGACAAAAAA TAGTAGCTG TAG CGGCTACTA AATTAGCCTTAACCT Swoo_3406 4167925 - 4166273 - | amidohydrolase 3 Swoo_3407 4168060 - 4168953 + | ApbE family lipoprotein TERM 4232 4169268 - 4169256 - g 72 -3.3 -5.00895 | opp_overlap 4169256, overlap 4169257 CTTATCACACAAAAA GGGCT GGC AGCCG TAATTAAGGAGCAGA TERM 4233 4170159 - 4170143 - g 78 -8.7 -4.04806 | TTGGATAGTAAATAA GACCCAA GTG TTGGGCC AGTACAAGAATAGTC Swoo_3408 4169061 - 4170254 + | natural resistance-associated macrophage protein Swoo_3409 4170694 - 4170251 - | hypothetical protein Swoo_3410 4171140 - 4171973 + | hypothetical protein Swoo_3411 4172824 - 4172105 - | pseudouridine synthase TERM 4234 4172857 - 4172870 + r 74 -9.5 -3.07013 | opp_overlap 4172857 CCTGAAAACGAAAAA GGCCC CTAG GGGCC TCTCTTAACGAAATA TERM 4235 4172870 - 4172857 - R 91 -9.5 -5.0925 | opp_overlap 4172857 CCTGAAAACGAAAAA GGCCC CTAG GGGCC TCTCTTAACGAAATA Swoo_3412 4174508 - 4172901 - | FAD dependent oxidoreductase TERM 4236 4173106 - 4173124 + g 71 -8.8 -3.56318 | GTTAGGGTCGCATCT TCCATGGC AAA GCCACGGA TCTTCTTATTAAACG Swoo_3413 4174994 - 4175317 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4237 4175308 - 4175298 - T 72 -5.4 -4.66537 | GTGTGGAAGATAAAA GAGA ACA TCTC ATCATTTAACGGCAG TERM 4238 4175360 - 4175332 - T 100 -11.9 -5.52986 | ACGGCAGTAAAAAAA TAAGCCAAAGG GGGCAAA CCTTTGGCTTA AAGCCAGCACACAGC Swoo_3414 4176014 - 4175670 - | hypothetical protein Swoo_3415 4178300 - 4176030 - | lipoxygenase Swoo_3416 4178930 - 4181041 + | alpha amylase catalytic region TERM 4239 4181128 - 4181086 - T 71 -6.4 -4.09117 | overlap 4181091 GCTATTTATAAACAA CTTAAGGTGCACTTTATC CTCTACC GATAAAGTGCACATAACG ACCTAAAGAGATATA TERM 4240 4181123 - 4181091 - T 75 -9.3 -3.35696 | overlap 4181086 TTATAAACAACTTAA GGTGCACTTTATC CTCTACC GATAAAGTGCACA TAACGACCTAAAGAG Swoo_3417 4181863 - 4181099 - | methyltransferase type 12 TERM 4241 4181312 - 4181332 + g 100 -4 -5.61689 | gap 1 ATCAATAAACAGTGG GT-GGGTTG GCGT CAGCCCCAC TTTTTTCTTAATTTT Swoo_3418 4182056 - 4182916 + | LysR family transcriptional regulator TERM 4242 4183333 - 4183311 - g 71 -9.8 -3.03474 | CGCCAGAATGATAGA TGGAGAGACC TAT GGTCACCCCA CTGAAGTTGAGGCTA Swoo_3419 4183102 - 4183881 + | hypothetical protein TERM 4243 4184615 - 4184603 - g 74 -7.7 -4.13767 | overlap 4184613 TCGGTTATTTCAAAA CCACA AAA TGTGG TGGCTGGTCAGCCAA TERM 4244 4184720 - 4184741 + G 77 -10.1 -3.52652 | opp_overlap 4184719 4184716 4184725 GGCGAGATAAATTAT GCAAAGCCG CGGT CGGCTCTGC TTCTGCTTACATCAC Swoo_3420 4183966 - 4184835 + | hypothetical protein TERM 4245 4185153 - 4185115 - T 100 -16.4 -3.76224 | overlap 4185116 CGCTGAGCGATCAAA TCTTTATATTGATTGGTA TAA TACCAATCAATATAAAGT GGAACATCAGGGTGG TERM 4246 4185152 - 4185116 - T 100 -19.9 -2.8552 | overlap 4185115 GCTGAGCGATCAAAT CTTTATATTGATTGGTA TAA TACCAATCAATATAAAG TGGAACATCAGGGTG Swoo_3421 4185616 - 4185194 - | hypothetical protein Swoo_3422 4186103 - 4186807 + | purine nucleoside phosphorylase Swoo_3423 4186963 - 4188141 + | major facilitator transporter TERM 4247 4188387 - 4188413 + T 100 -10.1 -5.35354 | opp_overlap 4188385 4188384 4188387 ACTACCCTAAAACTA GCCTCGCAAAC TTGTC GTTCGCGGGGC TTTTTTAATTATCTC TERM 4248 4188413 - 4188387 - T 76 -10.1 -3.10098 | opp_overlap 4188387, overlap 4188385 4188384 ACTACCCTAAAACTA GCCTCGCAAAC TTGTC GTTCGCGGGGC TTTTTTAATTATCTC Swoo_3424 4189102 - 4188422 - | cyclic nucleotide-binding protein Swoo_3425 4190033 - 4189203 - | cold-shock DNA-binding domain-containing protein Swoo_3426 4190993 - 4190457 - | hypothetical protein Swoo_3427 4191114 - 4192403 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 4249 4192829 - 4192803 - g 75 -9.5 -3.55444 | overlap 4192825 TTGTTACTCGCTAAA CCAGATTGCCG AAACA CAGCAATCTAG GCTAGAACAAGACTT TERM 4250 4193304 - 4193289 - g 74 -5.4 -4.66609 | GATCTTACTCAAAAA TGGCAA ACTA CTGCCA AAGGAGAGAGCCTTG Swoo_3428 4192585 - 4193700 + | metal dependent phosphohydrolase TERM 4251 4193818 - 4193779 - T 95 -13.9 -3.13591 | opp_overlap 4193781 4193785, overlap 4193781 4193785 ATAAAAGTCACTTAA CATAAAGCCAGTTTGAT TTAGTC ATCAAACTGGCTTTATT GGGTTATCGATTAAA TERM 4252 4193781 - 4193816 + T 100 -16.5 -3.2496 | opp_overlap 4193779 4193781 4193785, overlap 4193785 AAAAGTCACTTAACA TAAAGCCAGTTTGAT TTAGTC ATCAAACTGGCTTTA TTGGGTTATCGATTA TERM 4253 4193816 - 4193781 - T 100 -16.5 -3.11966 | opp_overlap 4193781 4193785, overlap 4193779 4193785 AAAAGTCACTTAACA TAAAGCCAGTTTGAT TTAGTC ATCAAACTGGCTTTA TTGGGTTATCGATTA TERM 4254 4193812 - 4193785 - T 100 -12.9 -4.21607 | opp_overlap 4193781 4193785, overlap 4193781 4193779 GTCACTTAACATAAA GCCAGTTTGAT TTAGTC ATCAAACTGGC TTTATTGGGTTATCG TERM 4255 4193785 - 4193812 + T 100 -12.9 -4.27467 | opp_overlap 4193785 4193781 4193779, overlap 4193781 GTCACTTAACATAAA GCCAGTTTGAT TTAGTC ATCAAACTGGC TTTATTGGGTTATCG Swoo_3429 4196927 - 4193844 - | MAM protein TERM 4256 4193960 - 4193944 - G 78 -8.7 -4.07687 | opp_overlap 4193944 ATGTCCCCGTCAAAA GAGGTGA GAT CCACCTC TTGATATTGATAAGC TERM 4257 4196795 - 4196805 + g 70 -5.4 -4.39998 | CAGCAGACTTTGCCT GAGA GAC TCTC TTTATTATCTCAATA Swoo_3430 4198074 - 4197313 - | hypothetical protein TERM 4258 4197641 - 4197657 + g 71 -9.5 -3.02461 | GCATTGTTATCGCCA TCTGCAT AAA ATGCAGA TATTGAGGAAGATTC TERM 4259 4198362 - 4198394 + r 91 -8.7 -5.03201 | gap 1, opp_overlap 4198368, overlap 4198363 4198368 AATGCTAGTTAAAAA TA-AAAACCGCAGA CTAATA TCTGCGGTTTTCTA TTTTTACTTGTTCTT TERM 4260 4198363 - 4198392 + r 82 -9.4 -4.11092 | opp_overlap 4198368, overlap 4198362 4198368 ATGCTAGTTAAAAAT AAAAACCGCAGA CTAATA TCTGCGGTTTTC TATTTTTACTTGTTC TERM 4261 4198368 - 4198387 + r 91 -9.3 -5.00027 | opp_overlap 4198368, overlap 4198363 4198362 AGTTAAAAATAAAAA CCGCAGA CTAATA TCTGCGG TTTTCTATTTTTACT TERM 4262 4198387 - 4198368 - R 100 -10 -5.63236 | opp_overlap 4198368 4198363 4198362 AGTTAAAAATAAAAA CCGCAGAC TAAT ATCTGCGG TTTTCTATTTTTACT Swoo_3431 4200291 - 4198468 - | peptidase S8 and S53 subtilisin kexin sedolisin Swoo_3432 4200660 - 4201331 + | hypothetical protein TERM 4263 4201388 - 4201361 - T 81 -9.9 -3.84346 | opp_overlap 4201360 4201358, overlap 4201359 ATAGCTAAACAAATA GTGGAGTATCC AGCTAA GGCTACTCCAC CTACTTTAGGCTTTT Swoo_3433 4201975 - 4201394 - | TetR family transcriptional regulator Swoo_3434 4202108 - 4202740 + | glutathione S-transferase domain-containing protein Swoo_3435 4202796 - 4203464 + | glutathione S-transferase domain-containing protein TERM 4264 4203531 - 4203510 - T 86 -9.5 -4.50976 | gap 1, opp_overlap 4203510 4203512 CGCGACACGATAAAA GAGCAGCGCT ATA AG-GCTGCTC TTCACTAAATTCGGT TERM 4265 4203510 - 4203531 + T 74 -9.5 -3.10112 | gap 1, opp_overlap 4203510, overlap 4203512 CGCGACACGATAAAA GAGCAGCGCT ATA AG-GCTGCTC TTCACTAAATTCGGT Swoo_3436 4203906 - 4203565 - | hypothetical protein Swoo_3437 4204196 - 4204852 + | putative periplasmic ligand-binding sensor protein TERM 4266 4204874 - 4204907 + T 76 -9.7 -3.17051 | gap 1, opp_overlap 4204881, overlap 4204874 4204876 AAAATAGTGCTAACT TATATCAGGCTGCAGG GTC TCTGCAGCCTGA-ACA TCTTGATGATAAAAA TERM 4267 4204876 - 4204906 + T 76 -10.4 -2.50016 | opp_overlap 4204881, overlap 4204874 4204874 AATAGTGCTAACTTA TATCAGGCTGCAGG GTC TCTGCAGCCTGAAC ATCTTGATGATAAAA TERM 4268 4204901 - 4204881 - T 89 -12.6 -2.66733 | opp_overlap 4204876 4204874 4204874 TGCTAACTTATATCA GGCTGCAG GGTCT CTGCAGCC TGAACATCTTGATGA Swoo_3438 4205598 - 4204957 - | thiopurine S-methyltransferase Swoo_3439 4205791 - 4206201 + | MerR family transcriptional regulator Swoo_3440 4206741 - 4206238 - | cupin 2 domain-containing protein TERM 4269 4206462 - 4206448 - G 73 -6.4 -4.32951 | ACGGTAACCAATAAA GTCACC GGA AGTGAC CACAAACTTCTCATC Swoo_3441 4207234 - 4206809 - | GCN5-related N-acetyltransferase TERM 4270 4208373 - 4208400 + G 87 -11.4 -3.62224 | TATAAAGAGGGTGAA CTTGAGATCCAA GATC TTGGCTCTCAAG TTGTTGGCCAACTCT Swoo_3442 4207629 - 4209011 + | Fmu (Sun) domain-containing protein TERM 4271 4209078 - 4209048 - f 70 -7.7 -3.63715 | gap 1, opp_overlap 4209056, overlap 4209050 4209056 CAGATAAGCAGACAA TAGATAAAGGCGGC TTTG GCTGCCTTTATC-A TCAAACTGCGCAGTG TERM 4272 4209077 - 4209050 - f 95 -12.8 -3.38671 | opp_overlap 4209056, overlap 4209048 4209056 GATAAGCAGACAATA GATAAAGGCGGC TTTG GCTGCCTTTATC ATCAAACTGCGCAGT TERM 4273 4209056 - 4209071 + F 77 -8.2 -3.96624 | opp_overlap 4209050 4209048 4209056 CAGACAATAGATAAA GGCGGC TTTG GCTGCC TTTATCATCAAACTG TERM 4274 4209071 - 4209056 - f 70 -6 -4.26393 | opp_overlap 4209056, overlap 4209050 4209048 CAGACAATAGATAAA GGCGGC TTTG GCTGCC TTTATCATCAAACTG Swoo_3443 4209170 - 4209340 + | hypothetical protein TERM 4275 4210187 - 4210171 - g 71 -2.1 -5.03314 | overlap 4210174 GGTAGGCCGAAAAAA CAGCGCC ACA AGCGACG ACATAAGCCATGTAT Swoo_3444 4209863 - 4212985 + | hypothetical protein TERM 4276 4213004 - 4213033 + T 72 -7.2 -3.99592 | opp_overlap 4213004 TACCCATAGTTAAAA GTGCTGGGCT TAGCGATAAC AGCTCAGCAC TTTCTACTACTCAAT Swoo_3445 4214731 - 4213061 - | diguanylate cyclase TERM 4277 4215121 - 4215107 - R 76 -10 -3.09983 | opp_overlap 4215107, overlap 4215105 AAAATGTCGAAGAGA CGCTAC AAA GTAGCG TTCAATAAGTCAGTT TERM 4278 4215107 - 4215121 + r 76 -10 -3.08312 | opp_overlap 4215107 4215105 AAAATGTCGAAGAGA CGCTAC AAA GTAGCG TTCAATAAGTCAGTT Swoo_3446 4215805 - 4215266 - | YfaZ family protein Swoo_3447 4216088 - 4216573 + | glutathione peroxidase TERM 4279 4216740 - 4216759 + T 100 -7.8 -5.91981 | opp_overlap 4216741, overlap 4216741 ACCTAACAGGTCATA AGGCAACC CTAT GGTTGCCC TTTTTTTTGGCTTTT TERM 4280 4216741 - 4216758 + T 86 -11.3 -4.11528 | opp_overlap 4216741, overlap 4216740 CCTAACAGGTCATAA GGCAACC CTAT GGTTGCC CTTTTTTTTGGCTTT TERM 4281 4216758 - 4216741 - T 82 -11.3 -3.3676 | opp_overlap 4216741 4216740 CCTAACAGGTCATAA GGCAACC CTAT GGTTGCC CTTTTTTTTGGCTTT TERM 4282 4217004 - 4217035 + T 100 -8.9 -5.63504 | gap 2, opp_overlap 4216998 4217003 4217001 CTAAAAGAATGATAC GGCATCC-C-ATCTC AATA GAGATAGTGGATGCC TTTTTTTATCAGCTT Swoo_3448 4218847 - 4217060 - | peptidase M1 membrane alanine aminopeptidase TERM 4283 4217339 - 4217350 + g 71 -4.4 -4.59773 | ATTATCGAGATCCAT CAGT TGGG ACTG TTTTTGAACCTCAGG Swoo_3449 4219003 - 4219881 + | collagenase TERM 4284 4220159 - 4220186 + T 100 -7.8 -5.52384 | gap 1 TGTGAAAGATCTTTA TGGCAGC-CCT CGATTGT AGGTGCTGCCA TTTTTTTACTCCACA TERM 4285 4220468 - 4220451 - T 78 -11.3 -2.65547 | opp_overlap 4220451, overlap 4220448 AAATTTGGAAATGTA GCGACCT GATT AGGTCGC TTTTTTTTGCCTTAC TERM 4286 4220451 - 4220468 + T 100 -11.3 -5.86332 | opp_overlap 4220451 4220448 AAATTTGGAAATGTA GCGACCT GATT AGGTCGC TTTTTTTTGCCTTAC TERM 4287 4220505 - 4220521 + T 82 -9.4 -4.09511 | opp_overlap 4220505 GTAACGCACAAAAAA GGCCTC ACTAG GAGGCC TTTTAAACAACTCTT TERM 4288 4220521 - 4220505 - T 100 -9.4 -5.31456 | opp_overlap 4220505 GTAACGCACAAAAAA GGCCTC ACTAG GAGGCC TTTTAAACAACTCTT Swoo_3450 4221514 - 4220543 - | phosphate binding protein TERM 4289 4221696 - 4221680 - R 100 -12.3 -5.80951 | opp_overlap 4221680 ACTTAAAATAAAAAA GCAGGCA AGA TGCCTGC TTATATCTCAAGGGG TERM 4290 4221680 - 4221696 + r 90 -12.3 -3.58726 | opp_overlap 4221680 ACTTAAAATAAAAAA GCAGGCA AGA TGCCTGC TTATATCTCAAGGGG Swoo_3451 4223013 - 4221718 - | PAS/PAC sensor signal transduction histidine kinase TERM 4291 4222679 - 4222658 - G 71 -9.5 -3.05159 | overlap 4222653 TTACACCAAACGATA TTGTGCTCA GCAT CGAGCACAA CGGCAGCATCGGGCA Swoo_3452 4223802 - 4223113 - | two component transcriptional regulator TERM 4292 4223948 - 4223969 + r 79 -8.7 -4.1891 | opp_overlap 4223948 4223949 4223964, overlap 4223949 GCTTTAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 4293 4223969 - 4223948 - R 79 -8.7 -4.0825 | opp_overlap 4223948 4223949, overlap 4223949 4223964 GCTTTAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 4294 4223968 - 4223949 - R 87 -12.2 -3.04468 | opp_overlap 4223949 4223948, overlap 4223948 4223964 CTTTAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 4295 4223949 - 4223968 + r 87 -12.2 -3.11024 | opp_overlap 4223948 4223949 4223964, overlap 4223948 CTTTAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 4296 4223978 - 4223996 + r 80 -10.2 -3.60214 | opp_overlap 4223964, overlap 4223979 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTGTCTACTTCAAAT TERM 4297 4223979 - 4223995 + r 93 -13.7 -2.75647 | opp_overlap 4223964, overlap 4223978 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTGTCTACTTCAAA TERM 4298 4224538 - 4224519 - R 90 -12.2 -3.44319 | opp_overlap 4224519 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 4299 4224519 - 4224538 + r 90 -12.2 -3.57144 | opp_overlap 4224519 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 4300 4224575 - 4224560 - R 100 -10.4 -5.79595 | opp_overlap 4224560 GCTGAAAACAAAAAA GGGAGC CTAA GCTCCC TTTAATTACTTTAGC TERM 4301 4224560 - 4224575 + r 85 -10.4 -4.04394 | opp_overlap 4224560 GCTGAAAACAAAAAA GGGAGC CTAA GCTCCC TTTAATTACTTTAGC Swoo_3454 4225543 - 4224596 - | porin Swoo_3455 4225734 - 4226747 + | putative exonuclease RdgC TERM 4302 4226766 - 4226794 + T 100 -16.2 -2.87881 | opp_overlap 4226773, overlap 4226773 TTGCGACCTCTCCAA CAAAAAAGGCGC TACTC GCGCCTTTTTTG TGTCTGGAACACTTA TERM 4303 4226787 - 4226773 - T 100 -8.5 -5.4505 | opp_overlap 4226766 4226773 CTCTCCAACAAAAAA GGCGC TACTC GCGCC TTTTTTGTGTCTGGA TERM 4304 4226773 - 4226787 + T 100 -8.5 -5.4251 | opp_overlap 4226773, overlap 4226766 CTCTCCAACAAAAAA GGCGC TACTC GCGCC TTTTTTGTGTCTGGA Swoo_3456 4228810 - 4227005 - | peptidase M61 domain-containing protein TERM 4305 4229417 - 4229403 - g 75 -4.3 -4.88407 | overlap 4229394 AACAAATCAATAAAA CTCTT TAATG AAGAG AACACGACCCAATCT TERM 4306 4229687 - 4229673 - g 70 -2.8 -5.02645 | overlap 4229675 AATAAAGAAAACAAA CCCTTT TTA AAAGCG AACTTAAAACTGAAA Swoo_3457 4228971 - 4231115 + | TPR repeat-containing protein Swoo_3458 4231252 - 4232808 + | diguanylate cyclase Swoo_3459 4232907 - 4234259 + | hypothetical protein TERM 4307 4234959 - 4234941 - g 87 -8.8 -4.47485 | AAAAAGGGGAGAAAA CCTATGCC TGA GGCATTGG CAAAATCCCTCCCTG TERM 4308 4235277 - 4235260 - g 74 -5.5 -4.65078 | overlap 4235262 ACAGTGGTAATAAAA TTCCTGG AGTA CCAGGTA TAGGGCCAAAGTCAG Swoo_3460 4234722 - 4235480 + | 5'-3' exonuclease Swoo_3461 4235631 - 4236017 + | hypothetical protein TERM 4309 4236254 - 4236266 + T 76 -9.1 -3.86015 | opp_overlap 4236250 CACGCATCACACCTT GCCCT TCA AGGGC TTTATCAACAGAGTA Swoo_3463 4237652 - 4236906 - | short-chain dehydrogenase/reductase SDR TERM 4310 4237709 - 4237732 + r 78 -10.4 -3.14463 | gap 1 TCATATCCAACGTCT TACCTGCTGCT GAT AGC-GCAGGTA TTCATCACCAAACTT Swoo_3464 4238161 - 4237694 - | hypothetical protein TERM 4311 4238302 - 4238280 - R 100 -16.4 -5.52023 | opp_overlap 4238280 AGTAGCAATAAAAAA GCCGAGAGAA ACT TTCTCTCGGC TCTAATTAAGCTGAA TERM 4312 4238280 - 4238302 + r 100 -16.4 -2.91274 | opp_overlap 4238280 AGTAGCAATAAAAAA GCCGAGAGAA ACT TTCTCTCGGC TCTAATTAAGCTGAA Swoo_3465 4241158 - 4238327 - | peptidase S9 prolyl oligopeptidase TERM 4313 4238972 - 4238962 - G 72 -6.8 -4.2558 | opp_overlap 4238962 TATCCGGTAGGAAAA TGGC ATA GCCA TTATCTGCATACCAA TERM 4314 4239208 - 4239218 + g 76 -8.2 -4.15565 | CATCCAGATCCGTTT GGCG CTT CGCC TTTTGCGGTGCTAAA TERM 4315 4240632 - 4240642 + g 70 -5.4 -4.37506 | TCTTTCTTACCAGAC TCTG GTT CAGA TTTATCTTTAGTGCT TERM 4316 4241314 - 4241299 - H 88 -3.2 -5.74122 | opp_overlap 4241300, overlap 4241300 CACTATATAAAAAAA CGTGAG ACTG CTCACT ATTTTCTGTGAAAAA Swoo_3466 4241444 - 4242451 + | isocitrate dehydrogenase (NAD(+)) TERM 4317 4242643 - 4242666 + T 100 -8.8 -5.27923 | opp_overlap 4242643 4242645 TGACGGTTTTAATTA GACCAGTTGC TCTT GCTGCTGGTC TTTTTTATGCACTTG Swoo_3467 4243874 - 4242640 - | transposase TERM 4318 4243600 - 4243624 + g 71 -2.1 -5.0538 | overlap 4243604 CGTAAATGTTCATCC TCAAGCTCTTT TTC AAGGCGCTTTA TTTTTTGAGCTGGCG TERM 4319 4243604 - 4243620 + g 73 -2.9 -5.05153 | overlap 4243600 AATGTTCATCCTCAA GCTCTTT TTC AAGGCGC TTTATTTTTTGAGCT TERM 4320 4243909 - 4243881 - R 86 -9.8 -4.30987 | gap 1, opp_overlap 4243889 AGTTGTCATAATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACCAGACACA TERM 4321 4243952 - 4243929 - R 100 -15.4 -5.05601 | opp_overlap 4243929 CACCAGACACAAAAA GGCCCTATGT AGAT ACATAGGGCC TTTTTATTATCTATC TERM 4322 4243929 - 4243952 + r 100 -15.4 -5.27206 | opp_overlap 4243929 CACCAGACACAAAAA GGCCCTATGT AGAT ACATAGGGCC TTTTTATTATCTATC Swoo_3468 4245078 - 4244002 - | hypothetical protein TERM 4323 4244969 - 4244993 + g 72 -8.7 -3.66654 | ACATAGCCGTCTTTT TTGTTGGTTTT AAC AAAACCACCAA TTTCGAGTTCAGCTG Swoo_3469 4245575 - 4245186 - | hypothetical protein Swoo_3470 4246242 - 4245568 - | dienelactone hydrolase TERM 4324 4245857 - 4245836 - G 82 -7.3 -4.72029 | TTTAACGGAACAAAA GGGTAACCT AAAC AGATCACCC CATCGACAGGAGTCA Swoo_3471 4247134 - 4246223 - | LysR family transcriptional regulator TERM 4325 4247088 - 4247098 + g 70 -5.4 -4.30978 | AGGTGCCTTGCTGCC GCTT CGA AAGC TTTTACTGAATTCAG Swoo_3472 4247317 - 4247544 + | hypothetical protein TERM 4326 4247577 - 4247602 + T 100 -11.2 -5.4251 | gap 1, opp_overlap 4247577 GAAACTAACAAAAAA GCCGCGAAGCA ACAGA TGCT-CGCGGC TTTTTTGTATCTAAC TERM 4327 4247602 - 4247577 - T 100 -11.2 -5.59655 | gap 1, opp_overlap 4247577 GAAACTAACAAAAAA GCCGCGAAGCA ACAGA TGCT-CGCGGC TTTTTTGTATCTAAC TERM 4328 4247668 - 4247641 - T 100 -18.6 -5.10461 | TCTATTTAATAAAAA GCCGCAGTGATA TCAG TATCACTGCGGC TCACACAAGTTAGCT Swoo_3473 4249156 - 4247702 - | thiamine biosynthesis/tRNA modification protein ThiI TERM 4329 4249289 - 4249264 - R 100 -14.1 -5.47159 | CCTAAGAAATAAAAA GGCGCTAAGAG TCTC CTCTTAACGCC CCATTAAATTAGATG Swoo_3474 4250292 - 4249324 - | OmpA/MotB domain-containing protein TERM 4330 4250078 - 4250097 + g 75 -8.6 -3.83756 | TCAAGGGCGATGACC GATGTCCC TTTG GGGATATC TTTAACTTCTACTTT Swoo_3475 4251064 - 4250297 - | MotA/TolQ/ExbB proton channel Swoo_3476 4251501 - 4251740 + | exodeoxyribonuclease VII, small subunit Swoo_3477 4251741 - 4252622 + | polyprenyl synthetase Swoo_3478 4252643 - 4254508 + | deoxyxylulose-5-phosphate synthase TERM 4331 4254530 - 4254559 + T 87 -12.3 -3.10796 | opp_overlap 4254530 4254536, overlap 4254536 GTCTATATCGGCAAA TAAAAAGGACTGC AGTT GCAGTCCTTTTTC TATTGAGTGATACCA TERM 4332 4254559 - 4254530 - T 90 -12.3 -3.59262 | opp_overlap 4254530 4254536, overlap 4254536 GTCTATATCGGCAAA TAAAAAGGACTGC AGTT GCAGTCCTTTTTC TATTGAGTGATACCA TERM 4333 4254553 - 4254536 - T 100 -11.3 -5.27938 | opp_overlap 4254530 4254536, overlap 4254530 ATCGGCAAATAAAAA GGACTGC AGTT GCAGTCC TTTTTCTATTGAGTG TERM 4334 4254536 - 4254553 + T 93 -11.3 -5.10767 | opp_overlap 4254536 4254530, overlap 4254530 ATCGGCAAATAAAAA GGACTGC AGTT GCAGTCC TTTTTCTATTGAGTG Swoo_3479 4255228 - 4254599 - | GrpE protein TERM 4335 4255600 - 4255616 + G 71 -4.3 -4.59511 | opp_overlap 4255601, overlap 4255601 GCGTTATTGGTGTAA ACCGAGG CAA CCTTGGC TTTTTAACCGATCTT Swoo_3480 4255323 - 4256201 + | ATP-NAD/AcoX kinase TERM 4336 4256218 - 4256251 + T 90 -11.1 -4.48221 | opp_overlap 4256220, overlap 4256220 CCACAAATTAATATA AATAAGGGCCAGATA TTAG TATCAGGCCCTTATA TTTTATAACTTGCTG TERM 4337 4256220 - 4256249 + T 100 -13.7 -3.84304 | opp_overlap 4256220, overlap 4256218 ACAAATTAATATAAA TAAGGGCCAGATA TTAG TATCAGGCCCTTA TATTTTATAACTTGC TERM 4338 4256249 - 4256220 - T 100 -13.7 -4.31904 | opp_overlap 4256220 4256218 ACAAATTAATATAAA TAAGGGCCAGATA TTAG TATCAGGCCCTTA TATTTTATAACTTGC Swoo_3481 4257371 - 4256280 - | TonB family protein Swoo_3482 4259072 - 4257723 - | multi anti extrusion protein MatE TERM 4339 4258660 - 4258647 - G 71 -5.3 -4.47259 | AGCATAATACCAAAA CAGAT AATC ATCTG CGCTATCAAGCACTG TERM 4340 4259114 - 4259094 - R 84 -7.6 -4.83615 | TATGCCCTATAAAAA CGTCACCT ATAGG AGATGACG TGAAAGCAGTTATAT Swoo_3483 4260204 - 4259149 - | cobalamin synthesis protein P47K TERM 4341 4260524 - 4260513 - g 74 -7.2 -4.26079 | opp_overlap 4260515 TGAAACTACTTAAAA CCGC AGCA GCGG CAGCTATTTCGATGG Swoo_3484 4260497 - 4261891 + | hypothetical protein TERM 4342 4261929 - 4261946 + F 100 -12.7 -5.82388 | opp_overlap 4261929 GATATACTTAACGAA GGGAGCC AATA GGCTCCC TTTTTTTTAAAATTT TERM 4343 4261946 - 4261929 - f 95 -12.7 -3.39856 | opp_overlap 4261929 GATATACTTAACGAA GGGAGCC AATA GGCTCCC TTTTTTTTAAAATTT TERM 4344 4262086 - 4262099 + F 83 -6.7 -5.09426 | opp_overlap 4262086 CTAGAAAAGCTCAAA GTCCA AAGT TGGAC TTTTTTACAATTAAA TERM 4345 4262351 - 4262331 - g 73 -2.6 -5.13521 | AAATCAGGGAAAAAA GCCTTCAT TCTGG ATAAAGAC CAACTCACTCGAATT Swoo_3485 4262154 - 4262567 + | hypothetical protein Swoo_3486 4262567 - 4263247 + | RES domain-containing protein Swoo_3487 4263916 - 4263353 - | hypothetical protein Swoo_3488 4264373 - 4264050 - | hypothetical protein Swoo_3489 4264841 - 4264590 - | hypothetical protein Swoo_3491 4265734 - 4265288 - | hypothetical protein Swoo_3492 4266046 - 4265822 - | hypothetical protein Swoo_3493 4266421 - 4266158 - | hypothetical protein Swoo_3494 4266806 - 4266489 - | hypothetical protein Swoo_3496 4267620 - 4268576 + | transposase IS111A/IS1328/IS1533 Swoo_3497 4268913 - 4268611 - | hypothetical protein Swoo_3498 4269207 - 4269025 - | hypothetical protein TERM 4346 4269173 - 4269187 + g 76 -10 -3.41795 | opp_overlap 4269186, overlap 4269186 CGTTCAAATACTCTA GCTTGC GAT GCAAGC TTCTCCTGAAGCTTT TERM 4347 4269186 - 4269199 + g 74 -6.7 -4.39407 | opp_overlap 4269186, overlap 4269173 TAGCTTGCGATGCAA GCTTC TCCT GAAGC TTTTCCATTCTTTCG TERM 4348 4269388 - 4269375 - R 73 -9.5 -3.04144 | opp_overlap 4269372 CCTGTATGCCTAACA CCCGC AGCT GCGGG CGACTTGTAGCGACG Swoo_3499 4269701 - 4269423 - | hypothetical protein TERM 4349 4269744 - 4269729 - R 78 -10.4 -3.21395 | overlap 4269727 ATTTGGCTCATAACA CCCGCA TAAA TGCGGG GAATACTTGGTTAAA Swoo_3500 4270180 - 4269824 - | hypothetical protein Swoo_3501 4270454 - 4270242 - | hypothetical protein Swoo_3502 4270860 - 4270504 - | hypothetical protein Swoo_3503 4271319 - 4270984 - | hypothetical protein TERM 4350 4273289 - 4273307 + G 74 -10.2 -3.13867 | opp_overlap 4273280, overlap 4273287 ATTATATCGATCGTT TCGACGCC GCT GGCGCCGA TGTATTGGTGGATAG Swoo_3504 4272118 - 4274058 + | radical SAM domain-containing protein Swoo_3505 4274624 - 4275694 + | hypothetical protein TERM 4351 4275746 - 4275720 - T 93 -10.9 -4.93696 | opp_overlap 4275721, overlap 4275721 TCGAAATATTAAAAA TCCTTAGCGGT TTAAC ACCGCTAAGGT TTTTATCTCTTACTT TERM 4352 4275745 - 4275721 - T 100 -14.4 -3.55133 | opp_overlap 4275721, overlap 4275720 CGAAATATTAAAAAT CCTTAGCGGT TTAAC ACCGCTAAGG TTTTTATCTCTTACT TERM 4353 4275721 - 4275745 + T 100 -14.4 -5.10968 | opp_overlap 4275721 4275720 CGAAATATTAAAAAT CCTTAGCGGT TTAAC ACCGCTAAGG TTTTTATCTCTTACT Swoo_3506 4277035 - 4275749 - | DEAD/DEAH box helicase domain-containing protein Swoo_3507 4280133 - 4277095 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 4354 4278842 - 4278858 + g 75 -8.7 -3.73968 | opp_overlap 4278842 CCACACATGCGAACA GGTGAGC CTT GCTCATC TTTACTGACCACTTT TERM 4355 4280763 - 4280752 - g 72 -5.8 -4.52214 | overlap 4280753 AAAGCAAAAGATAAA TGGC AGCT GCCA CCCAATACAAAAGTA Swoo_3508 4280377 - 4281129 + | amino acid ABC transporter TERM 4356 4281255 - 4281270 + F 78 -10.4 -3.1478 | overlap 4281253 GCATTAACGGCATTC CCGCCA TCCA TGGCGG TCTTCATGAAATAGT Swoo_3509 4281696 - 4282136 + | thioesterase superfamily protein TERM 4357 4282142 - 4282162 + T 88 -6.8 -5.1861 | opp_overlap 4282144, overlap 4282144 GGCTCTGTAATAGCA AAGGGGAG CTTGC CTCCCCTA TTTTTTAGTAATAAG TERM 4358 4282144 - 4282160 + T 85 -9.4 -4.22314 | opp_overlap 4282144, overlap 4282142 CTCTGTAATAGCAAA GGGGAG CTTGC CTCCCC TATTTTTTAGTAATA TERM 4359 4282160 - 4282144 - T 81 -9.4 -3.92324 | opp_overlap 4282144 4282142 CTCTGTAATAGCAAA GGGGAG CTTGC CTCCCC TATTTTTTAGTAATA Swoo_3510 4283695 - 4282181 - | diguanylate cyclase/phosphodiesterase Swoo_3511 4284610 - 4283768 - | putative signal transduction protein TERM 4360 4284312 - 4284337 + g 89 -9.7 -4.57474 | opp_overlap 4284308 GAAATAAAGAGCTGC TCCATCGCCGC AGAA GTCGCGATGGA TTTTATCTGAGTTAA Swoo_3512 4284920 - 4286284 + | peptidase U32 Swoo_3513 4286362 - 4286619 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Swoo_3514 4287946 - 4286663 - | response regulator receiver modulated diguanylate cyclase TERM 4361 4288061 - 4288042 - R 87 -12.2 -2.89714 | opp_overlap 4288042, overlap 4288039 ATTTAAGGATAAGCA GTGGAGCT CATC AGCTCCAC TTAATACCAATCAGT TERM 4362 4288042 - 4288061 + r 87 -12.2 -3.15663 | opp_overlap 4288042 4288039 ATTTAAGGATAAGCA GTGGAGCT CATC AGCTCCAC TTAATACCAATCAGT Swoo_3515 4288608 - 4288096 - | sterol-binding domain-containing protein TERM 4363 4288803 - 4288788 - g 70 -9 -3.24825 | opp_overlap 4288787, overlap 4288784 AGCAAGAATATGGAA CTGCTG TGCC CAGCAG GTAATTTGGCATCAC TERM 4364 4288845 - 4288825 - g 76 -5.4 -4.77036 | gap 1 TGGCATCACTAAAAA CCGC-CCTG AACG CAGGTGCAG ATGCCGTCTACTTAG Swoo_3516 4288782 - 4289783 + | peptidase U32 Swoo_3517 4289798 - 4290658 + | peptidase U32 Swoo_3518 4291407 - 4290727 - | hypothetical protein Swoo_3519 4291767 - 4293311 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 4365 4293350 - 4293318 - f 95 -13.5 -3.08679 | opp_overlap 4293347, overlap 4293301 4293345 4293347 TTTGGCTAGTTAATA GCCATCGGTATCAGC CTG GATGATACAGATGGC ATAGAGATAACTATG TERM 4366 4293370 - 4293345 - f 87 -12 -2.94218 | opp_overlap 4293347, overlap 4293318 4293347 AGCCTGGATGATACA GATGGCATAG AGATAA CTATGCCATC TCTCGCTAAAACAAC Swoo_3520 4293671 - 4295026 + | nucleoside recognition domain-containing protein TERM 4367 4295070 - 4295054 - f 100 -12.3 -5.37593 | opp_overlap 4295054 CCTCAAACTAAAAAA GAGTGGC TGT GCCACTC TTTTTTTATTCCTAT TERM 4368 4295054 - 4295070 + F 100 -12.3 -5.85737 | opp_overlap 4295054 CCTCAAACTAAAAAA GAGTGGC TGT GCCACTC TTTTTTTATTCCTAT Swoo_3521 4295168 - 4298881 + | PAS/PAC sensor signal transduction histidine kinase Swoo_3522 4298969 - 4299373 + | CBS domain-containing protein TERM 4369 4299398 - 4299410 + T 75 -7.7 -4.08216 | GTATAAGAAAGTAGC CAGCT CAG AGCTG TTTTAGGCAAACTAG Swoo_3523 4301098 - 4299722 - | xanthine/uracil/vitamin C permease Swoo_3524 4301598 - 4301819 + | trimethylamine N-oxide reductase system, TorE protein Swoo_3525 4301880 - 4303058 + | trimethylamine-N-oxide reductase c-type cytochrome TorC Swoo_3526 4303077 - 4305569 + | trimethylamine-N-oxide reductase TorA Swoo_3527 4305600 - 4306271 + | cytoplasmic chaperone TorD family protein TERM 4370 4306298 - 4306315 + T 100 -11.3 -5.76633 | opp_overlap 4306298 AGCTGACACAAAAAA GCGCTGA AAAT TCAGCGC TTTTTTTATATCTAA TERM 4371 4306315 - 4306298 - T 100 -11.3 -5.37043 | opp_overlap 4306298 AGCTGACACAAAAAA GCGCTGA AAAT TCAGCGC TTTTTTTATATCTAA Swoo_3528 4307737 - 4306370 - | MgtE intracellular region TERM 4372 4306425 - 4306413 - G 70 -5.5 -4.31837 | overlap 4306417 AAGAAAGTGAAGAAA CCAAC CAC GTCGG TCACCGTGGTCAAGA TERM 4373 4306548 - 4306537 - G 72 -5.8 -4.4773 | GCATATTAACTAAAA TGGC GCAC GCCA TCACCATGCCGATGG Swoo_3529 4309038 - 4307797 - | DEAD/DEAH box helicase domain-containing protein TERM 4374 4309605 - 4309587 - g 71 -8.8 -3.44051 | GTTTTACCATCACAA TGCCCTGC TCT GCAGCGCA AAAAGCCTTTGGGGA TERM 4375 4310374 - 4310351 - g 72 -8.8 -3.65529 | opp_overlap 4310339 ATATCGTCACTCAAA CGTGGCGGTG GTGT CACCACCATG TCAGGTACATCGATG Swoo_3530 4309316 - 4310500 + | peptidase S8 and S53 subtilisin kexin sedolisin Swoo_3531 4310773 - 4311264 + | hypothetical protein Swoo_3532 4314243 - 4311253 - | multi-sensor hybrid histidine kinase TERM 4376 4315376 - 4315350 - g 76 -2.8 -5.19003 | overlap 4315351 AAGATAAAAAACAAA CTGAGCAAGAGC CTA GCCCCAGCCCAC TTCTACCCTGTCTAC Swoo_3533 4314363 - 4315421 + | TMAO reductase system periplasmic protein TorT TERM 4377 4315438 - 4315418 - T 73 -2.5 -5.23016 | overlap 4315419 AAATAATCGAAAAAA GTGAAAGGC GAT GCCTTTGAT AGCCACTTAGTCTTC Swoo_3534 4316176 - 4315445 - | two component transcriptional regulator Swoo_3535 4316416 - 4316793 + | type IV pilus assembly PilZ TERM 4378 4316876 - 4316915 + F 100 -15.4 -3.14203 | opp_overlap 4316881, overlap 4316881 GCTCTGCGTTTATCC AAAAATTAATAAGCCTTC GAAT GAAGGCTTATTAATTTTC TATATGTTAACTTTT TERM 4379 4316910 - 4316881 - f 100 -15.3 -4.65895 | opp_overlap 4316876 4316881 GCGTTTATCCAAAAA TTAATAAGCCTTC GAAT GAAGGCTTATTAA TTTTCTATATGTTAA TERM 4380 4316881 - 4316910 + F 100 -15.3 -4.68124 | opp_overlap 4316881, overlap 4316876 GCGTTTATCCAAAAA TTAATAAGCCTTC GAAT GAAGGCTTATTAA TTTTCTATATGTTAA Swoo_3536 4317425 - 4317700 + | hypothetical protein Swoo_3537 4317811 - 4318440 + | hypothetical protein Swoo_3538 4318508 - 4318954 + | hypothetical protein Swoo_3539 4319279 - 4319701 + | hypothetical protein Swoo_3540 4321358 - 4319985 - | DNA repair protein RadA TERM 4381 4320741 - 4320769 + g 74 -8.1 -4.13767 | GACATTGTTCTGTTT GCAGTACTGAGTC AAT GACTGGGCACTGC TTTTAACCTGAGAGG TERM 4382 4323654 - 4323643 - g 80 -5.8 -5.08824 | opp_overlap 4323642 TCTTTATCGAAAAAA CCGT TAAA ACGG CTAAATTAAGCACCT Swoo_3541 4321776 - 4324193 + | type IV pilus assembly PilZ Swoo_3542 4324352 - 4325590 + | putative esterase TERM 4383 4325608 - 4325635 + T 86 -11.4 -3.76125 | opp_overlap 4325602 GTCACATAAGTTCTG GTCCTAGTGTGA GTAC TCACACTAGAAC TTTAGCTTCCGATAG Swoo_3543 4326565 - 4325624 - | alpha/beta hydrolase fold TERM 4384 4326635 - 4326624 - R 71 -4.4 -4.76088 | GAAATGAAAAAACAA GAGT AAAT ACTC AATAAAGTGGAATAT TERM 4385 4326764 - 4326717 - R 100 -13.7 -5.63645 | TTAAAACATAAAAAA TTAAGCCCGTTGATAGGAAAA AAGCCG TTATCCTATCAATGGGCTCAA CTAAGAAGCTAATAC Swoo_3544 4327772 - 4326792 - | phosphoserine phosphatase SerB Swoo_3545 4327851 - 4328516 + | membrane protein TERM 4386 4328620 - 4328602 - T 100 -13.2 -5.59879 | opp_overlap 4328602 GATAAACATAAAAAA GGGCTCAT ATT ATGAGCCC TTTTTATTCGCTTTC TERM 4387 4328602 - 4328620 + T 100 -13.2 -5.16151 | opp_overlap 4328602 GATAAACATAAAAAA GGGCTCAT ATT ATGAGCCC TTTTTATTCGCTTTC Swoo_3546 4329393 - 4328683 - | purine nucleoside phosphorylase TERM 4388 4328944 - 4328934 - G 70 -5.4 -4.40804 | opp_overlap 4328937 GATCAGCTGAGAAAA CGTT ACC AACG CGGTACTTAGTACCT Swoo_3547 4330717 - 4329500 - | phosphopentomutase Swoo_3548 4332070 - 4330739 - | thymidine phosphorylase TERM 4389 4332268 - 4332239 - R 85 -5.1 -5.64006 | opp_overlap 4332241, overlap 4332230 4332225 4332263 ACTTAACTAAAAAAA TAGCCCTATTT TTTTAATC AAAAAGGGCTA TTGAGCAGTGCTTAG TERM 4390 4332289 - 4332263 - R 91 -9.4 -4.8622 | opp_overlap 4332241 4332285 4332286, overlap 4332239 TTTTTTAATCAAAAA GGGCTATTGAGC AGT GCTTAGTAGCCC TGTGGGCCTTTAGCT Swoo_3549 4333053 - 4332280 - | deoxyribose-phosphate aldolase TERM 4391 4333434 - 4333389 - R 74 -8.6 -3.67296 | opp_overlap 4333384 4333383, overlap 4333390 CACTATCTAGTTAAA CCTTTACTTAAATAGGCT GAGATAATAT AGCCTGTTTAAGTAAAGA TTAAGATGCTTTTTG TERM 4392 4333433 - 4333390 - R 74 -9.9 -2.80056 | opp_overlap 4333384 4333383, overlap 4333389 ACTATCTAGTTAAAC CTTTACTTAAATAGGCT GAGATAATAT AGCCTGTTTAAGTAAAG ATTAAGATGCTTTTT TERM 4393 4333495 - 4333470 - R 100 -12.7 -4.73864 | gap 1, overlap 4333472 CGAATTAAGAGAAAA TA-GAGCCACGC AGC GCGTGGCTCATA CACCCTTACAGCTCT TERM 4394 4333492 - 4333472 - R 100 -16.9 -3.97283 | overlap 4333470 AATTAAGAGAAAATA GAGCCACGC AGC GCGTGGCTC ATACACCCTTACAGC Swoo_3550 4334343 - 4333510 - | nucleoside-specific channel-forming protein Tsx TERM 4395 4334667 - 4334636 - R 83 -11.6 -3.06312 | AAATGGTTGAGTTAA CTTGGGCACTACTC ACAT GAGTAGTGCACCAG TTAGAGGGGAGAGTC Swoo_3551 4335962 - 4334703 - | nucleoside transporter TERM 4396 4335687 - 4335668 - G 75 -4.4 -4.92791 | gap 1 GAGAAGAGAAGAAAA CAATG-ACT GGA AGTACATTG ACGGCGAAGATGAAA Swoo_3552 4336929 - 4336138 - | TatD-related deoxyribonuclease TERM 4397 4336732 - 4336714 - G 74 -5.9 -4.68593 | GTTATCACTGAAAAA CCAAGGG TGTAT CCCTAGG GCATAAGGACAGGAG Swoo_3553 4337099 - 4336938 - | hypothetical protein TERM 4398 4337403 - 4337382 - R 91 -8.7 -5.03314 | opp_overlap 4337382, overlap 4337351 GCCATGTGCAAAAAA GCCCCAAAC TTTC GTTCAGGGC TTATTTAAACAAGTC Swoo_3554 4339013 - 4337433 - | peptide chain release factor 3 TERM 4399 4339140 - 4339181 + r 78 -10.4 -3.12351 | opp_overlap 4339139 4339138, overlap 4339144 GCCAAACAGAAGAGG TATCTACCATCGTGTCTA TAGGCT TAGACACGATGATATATA TTGACTATAAGCAGA TERM 4400 4339144 - 4339177 + r 80 -11.2 -3.12142 | opp_overlap 4339139 4339138, overlap 4339140 AACAGAAGAGGTATC TACCATCGTGTCTA TAGGCT TAGACACGATGATA TATATTGACTATAAG Swoo_3555 4340109 - 4339201 - | TPR repeat-containing protein TERM 4401 4340252 - 4340269 + r 84 -11.3 -3.84514 | opp_overlap 4340252 TCAGGCAATAAAAAA GGAGACC CTAA GGTCTCC TTTCATCGTTAAGCT TERM 4402 4340269 - 4340252 - R 100 -11.3 -5.4833 | opp_overlap 4340252 TCAGGCAATAAAAAA GGAGACC CTAA GGTCTCC TTTCATCGTTAAGCT TERM 4403 4340301 - 4340317 + r 76 -8.7 -3.83154 | overlap 4340302 AATGCTTATTCAGCA GCTGGAG CCG CTTCAGC TTTAGGTTGTGCTTC Swoo_3556 4342399 - 4340291 - | polyribonucleotide nucleotidyltransferase TERM 4404 4343876 - 4343838 - g 72 -10.4 -2.88212 | gap 1, overlap 4343840 4343868 AAGCAGCAGATGACA GAGCGA-GCTGCGGTTC GATTAA GAACCGAAGCATCACTC CATGACGCCCTTAAA TERM 4405 4343996 - 4343982 - g 76 -4.2 -5.17054 | ATAAGATGGAAAAAA GATGGG CGC CTCATC AGTCCACTCTCATTC Swoo_3557 4342596 - 4344629 + | diguanylate cyclase/phosphodiesterase TERM 4406 4344684 - 4344659 - T 75 -7.7 -4.11484 | opp_overlap 4344681, overlap 4344681 TTCAATCTCCCAAAA CTCCTTTTTCA GACA CAAAAAAGGAG GCCTAAGCCTCCTTT TERM 4407 4344681 - 4344696 + T 85 -10.4 -4.07868 | opp_overlap 4344659 4344681 TTCAGACACAAAAAA GGAGGC CTAA GCCTCC TTTATCTAAATCTAA TERM 4408 4344696 - 4344681 - T 100 -10.4 -5.4251 | opp_overlap 4344681, overlap 4344659 TTCAGACACAAAAAA GGAGGC CTAA GCCTCC TTTATCTAAATCTAA Swoo_3558 4344987 - 4344718 - | ribosomal protein S15 Swoo_3559 4346082 - 4345129 - | tRNA pseudouridine synthase B Swoo_3560 4346504 - 4346082 - | ribosome-binding factor A TERM 4409 4346849 - 4346832 - R 100 -14.1 -5.38497 | opp_overlap 4346830 ATCTAAACGAAAAAA GGGCGGC ATCC GCCGCCC CCTTAGCTACAGTCT Swoo_3561 4349550 - 4346866 - | translation initiation factor IF-2 TERM 4410 4347484 - 4347462 - G 83 -10.6 -3.61398 | opp_overlap 4347461 4347460 CGTCCGCTTTAAGAA CGATGTTCAG CTC CTGAACTTCG CCTTCTGTCATGTTA TERM 4411 4348921 - 4348939 + g 75 -8.8 -3.75378 | overlap 4348932 ACGTTGCTTCTCTTC CTCAGCCC AAC GAGCTGAG TTCTCTTCTGCAAGT TERM 4412 4349430 - 4349450 + g 75 -5.3 -4.78029 | overlap 4349434 GCAACTGCTGCTTCT CAGCCTCAG AGA CTGAGTCAG TTTTACTTTTCTTAA Swoo_3562 4351076 - 4349577 - | NusA antitermination factor Swoo_3563 4351560 - 4351105 - | hypothetical protein TERM 4413 4351598 - 4351585 - R 100 -8.1 -5.93252 | CCGAAAAACAAAAAA GGGCT AAAT AGCCC CAGTACAACACCGAT TERM 4414 4351664 - 4351649 - R 90 -6.8 -5.60689 | opp_overlap 4351649 CCAGATAACAAAAAA CCCCGT AATA ACGAGG TCGTTGAGTTTAGAA TERM 4415 4352097 - 4352114 + r 70 -7.1 -3.73402 | opp_overlap 4352059 4352097 TTGAGATTGATACCA TCATAAG CTTA CTTATGA TTTAGTCAGGGATCT Swoo_3564 4352457 - 4352116 - | preprotein translocase, SecG subunit Swoo_3565 4353241 - 4352459 - | Triose-phosphate isomerase TERM 4416 4353414 - 4353387 - R 86 -8.6 -4.67011 | opp_overlap 4353387 AATCCTATTTAAAAA GAATTAGCCAAC TCAA GTTAACTAATTC TTCATCATTAAATAG Swoo_3566 4354775 - 4353438 - | phosphoglucosamine mutase TERM 4417 4354109 - 4354134 + g 73 -9.1 -3.48269 | gap 1, opp_overlap 4354116, overlap 4354104 TTTCGCAAATCTTAG CCATAGAGGTCG CGC CGACTTC-ATGG TTGATGTTTAGTCCA Swoo_3567 4355762 - 4354923 - | dihydropteroate synthase TERM 4418 4355619 - 4355601 - G 70 -7.4 -3.9777 | opp_overlap 4355601 4355600 GCCAATATCGATAAA GCTTGCTC CCT GAGCAACC ATTTGATCAGCATGT TERM 4419 4355794 - 4355816 + r 95 -12.1 -4.25104 | opp_overlap 4355768 4355794 4355799, overlap 4355799 ACCTTTTGAAAACAA GAAAACCCC ATAGC GGGGTTTTC TTTTAGTCAGCAAAA TERM 4420 4355816 - 4355794 - R 100 -12.8 -4.17316 | opp_overlap 4355794 4355799, overlap 4355768 4355799 ACCTTTTGAAAACAA GAAAACCCCA TAG CGGGGTTTTC TTTTAGTCAGCAAAA TERM 4421 4355799 - 4355811 + r 80 -6.2 -5.13722 | opp_overlap 4355768 4355794 4355799, overlap 4355794 TTGAAAACAAGAAAA CCCC ATAGC GGGG TTTTCTTTTAGTCAG TERM 4422 4355811 - 4355799 - R 85 -6.9 -5.093 | opp_overlap 4355799 4355794, overlap 4355768 4355794 TTGAAAACAAGAAAA CCCCA TAG CGGGG TTTTCTTTTAGTCAG Swoo_3568 4357810 - 4355837 - | ATP-dependent metalloprotease FtsH Swoo_3569 4358669 - 4358040 - | ribosomal RNA methyltransferase RrmJ/FtsJ Swoo_3570 4358761 - 4359060 + | hypothetical protein TERM 4423 4359148 - 4359121 - T 100 -20 -4.87291 | opp_overlap 4359121 TACCGTAAGTAAAAA CGGAGCCACTGA CTAT TCAGTGGCTCCG TTTTTTTATGGGGTA TERM 4424 4359121 - 4359148 + T 100 -20 -5.626 | opp_overlap 4359121 TACCGTAAGTAAAAA CGGAGCCACTGA CTAT TCAGTGGCTCCG TTTTTTTATGGGGTA Swoo_3571 4360098 - 4359154 - | protein-export membrane protein SecF Swoo_3572 4361914 - 4360100 - | protein-export membrane protein SecD Swoo_3573 4362594 - 4362109 - | hypothetical protein TERM 4425 4362171 - 4362181 + g 71 -4.6 -4.61231 | opp_overlap 4362167 CTTTCCAACCAGAAA GCCG AGA TGGC TTTTTACCCATATGC TERM 4426 4362732 - 4362713 - R 89 -6.4 -5.4251 | opp_overlap 4362713 TGCAGATATAAAAAA GCCGCT ATTATCGA AGCGGC TTTAGTCAAAAAGAG Swoo_3574 4363223 - 4362762 - | transcription elongation factor GreA TERM 4427 4363357 - 4363345 - H 70 -9.1 -3.05498 | CATTCTATACATAGA GCGTC CAT GACGC CAGTGGTGAAAAAGC Swoo_3575 4363594 - 4364253 + | hypothetical protein TERM 4428 4364268 - 4364295 + T 85 -11.4 -3.47617 | opp_overlap 4364270 4364274, overlap 4364270 4364274 AAGCAAAACTCAAAG AATAAAGAGGCC ATTA GGCCTCTTTATC TTCTGACTTTCAAAT TERM 4429 4364270 - 4364293 + T 100 -14 -3.30797 | opp_overlap 4364270 4364274, overlap 4364268 4364274 GCAAAACTCAAAGAA TAAAGAGGCC ATTA GGCCTCTTTA TCTTCTGACTTTCAA TERM 4430 4364293 - 4364270 - T 100 -14 -4.08307 | opp_overlap 4364270 4364268 4364274, overlap 4364274 GCAAAACTCAAAGAA TAAAGAGGCC ATTA GGCCTCTTTA TCTTCTGACTTTCAA TERM 4431 4364289 - 4364274 - T 89 -10.4 -4.59489 | opp_overlap 4364270 4364268 4364274, overlap 4364270 AACTCAAAGAATAAA GAGGCC ATTA GGCCTC TTTATCTTCTGACTT TERM 4432 4364274 - 4364289 + T 87 -10.4 -4.28791 | opp_overlap 4364274 4364270, overlap 4364270 4364268 AACTCAAAGAATAAA GAGGCC ATTA GGCCTC TTTATCTTCTGACTT Swoo_3576 4366631 - 4364313 - | methyl-accepting chemotaxis sensory transducer TERM 4433 4364931 - 4364942 + g 71 -4.4 -4.70515 | CTCAGCAACATGGCT TGTC TCTT GACA TTTATTTTCGGTATC TERM 4434 4364970 - 4364985 + g 72 -3.2 -5.02476 | ATCCCTTACTGAATC TGAAGC ATTG GCTGCA TTTTTTGCCACCTCT TERM 4435 4366050 - 4366038 - G 71 -9.1 -3.37441 | overlap 4366036 4366034 AGAGTAAACAACATA GCCAG TTT CTGGC TCGATAAGAAAGATG TERM 4436 4366728 - 4366743 + r 100 -11.8 -4.56597 | opp_overlap 4366728 AACAAAAACAAAAAA GGCCGC ATAT GCGGCC TTTTTACAGAGAAAG TERM 4437 4366743 - 4366728 - R 100 -11.8 -6.01725 | opp_overlap 4366728 AACAAAAACAAAAAA GGCCGC ATAT GCGGCC TTTTTACAGAGAAAG Swoo_3577 4369982 - 4366764 - | carbamoyl-phosphate synthase, large subunit TERM 4438 4369024 - 4369043 + g 71 -8.6 -3.53444 | gap 1 TTTGCAGCGATTTTT GCAATCGGG AAA CCCG-TTGC TTTAGAAGCGAGTGC Swoo_3578 4371148 - 4370003 - | carbamoyl-phosphate synthase, small subunit TERM 4439 4371323 - 4371309 - R 91 -3.5 -5.94597 | TAATATGAAAAAAAA TCGCC AAATA GACGA TTTTTTAAAATAACT Swoo_3579 4372152 - 4371337 - | dihydrodipicolinate reductase TERM 4440 4372215 - 4372238 + r 75 -9.6 -3.36452 | opp_overlap 4372217, overlap 4372217 TATCTCTGCAAAAAA AAGCCTAAGC ATTA GCTTAGGCTC TTAATATTACAGAAT TERM 4441 4372217 - 4372236 + r 89 -12.2 -3.25073 | opp_overlap 4372217, overlap 4372215 TCTCTGCAAAAAAAA GCCTAAGC ATTA GCTTAGGC TCTTAATATTACAGA TERM 4442 4372236 - 4372217 - R 100 -12.2 -5.75342 | opp_overlap 4372215 4372217 TCTCTGCAAAAAAAA GCCTAAGC ATTA GCTTAGGC TCTTAATATTACAGA Swoo_3580 4372862 - 4372245 - | peptidylprolyl isomerase FKBP-type Swoo_3581 4373749 - 4372949 - | peptidase M48 Ste24p TERM 4443 4374001 - 4374026 + r 100 -19.1 -3.95621 | opp_overlap 4374001, overlap 4373992 TAATCCCACAAAAAA GCCCCGTTTGC GTTA GCAAACGGGGC TTTATCAACTTTAAT TERM 4444 4374026 - 4374001 - R 100 -19.1 -5.27923 | opp_overlap 4374001 4373992 TAATCCCACAAAAAA GCCCCGTTTGC GTTA GCAAACGGGGC TTTATCAACTTTAAT Swoo_3582 4375197 - 4374061 - | chaperone protein DnaJ TERM 4445 4375282 - 4375255 - R 100 -17.8 -3.30159 | opp_overlap 4375255 CTAATCTTGTGACAA CGGGCGTTAGAG TTTC CCCTAACGCCCG TATTCAATAATCTAG TERM 4446 4375255 - 4375282 + r 100 -15.6 -3.11768 | opp_overlap 4375255 CTAATCTTGTGACAA CGGGCGTTAGAG TTTC CCCTAACGCCCG TATTCAATAATCTAG Swoo_3583 4377233 - 4375311 - | chaperone protein DnaK Swoo_3584 4377578 - 4378498 + | hypothetical protein TERM 4447 4378489 - 4378476 - T 73 -3.8 -5.1167 | opp_overlap 4378476 AACTTAAGATAAAAA GTGG TACCAG CCAC TCTCATTAATACCAA TERM 4448 4378814 - 4378799 - T 100 -9 -5.43414 | opp_overlap 4378799 AGCAGACACAAAAAA GCCCAT CGAG ATGGGC TTTATTCGCTTAAAA TERM 4449 4378799 - 4378814 + T 83 -9 -4.2528 | opp_overlap 4378799 AGCAGACACAAAAAA GCCCAT CGAG ATGGGC TTTATTCGCTTAAAA Swoo_3585 4379507 - 4378842 - | hypothetical protein Swoo_3586 4380912 - 4380376 - | hypothetical protein Swoo_3587 4381335 - 4381162 - | hypothetical protein TERM 4450 4381473 - 4381421 - R 100 -18.1 -3.02461 | opp_overlap 4381424 4381431 4381434, overlap 4381431 4381434 TAACGCCTTGCAACA TTTGCCAAAATAAGTATTGGCCT GCTTTTT AGGCCGATGCTTATTTTGGCAAA TGGCTGAGCTGGTTA TERM 4451 4381431 - 4381463 + r 85 -10 -4.09864 | opp_overlap 4381421 4381431 4381434, overlap 4381424 4381434 CAACATTTGCCAAAA TAAGTATTGGCCTG CTTTT TAGGCCGATGCTTA TTTTGGCAAATGGCT TERM 4452 4381434 - 4381460 + r 73 -7.3 -4.17762 | opp_overlap 4381431 4381421 4381434, overlap 4381424 4381431 CATTTGCCAAAATAA GTATTGGCCTG CTTTT TAGGCCGATGC TTATTTTGGCAAATG Swoo_3588 4381791 - 4381495 - | hypothetical protein Swoo_3589 4382157 - 4381921 - | hypothetical protein TERM 4453 4382650 - 4382666 + H 75 -9.5 -3.34398 | overlap 4382648 CGATTTCAAGGCGAA GTTTCAC TTT GTGAAAC TCTTTGAGCGAGAGG TERM 4454 4382835 - 4382819 - H 81 -9.5 -3.93398 | AGCGATAGATAACAA TGAAGGT ACG ACCTTCA AACACAACACCAAGT TERM 4455 4383389 - 4383368 - H 77 -9.5 -3.39434 | overlap 4383363 AATCAAGAAATGTAA TCAGCCTTC ATTC GAAGGCTAA CAAAAAATGTGTACT TERM 4456 4383747 - 4383730 - g 76 -2.7 -5.26316 | overlap 4383732 CGATTGGAGAAAAAA CCTTCAT CAAC ATGAATG TAACTATGCTTGATG Swoo_3590 4383498 - 4384073 + | hexapeptide repeat-containing acetyltransferase TERM 4457 4384525 - 4384543 + F 83 -7.6 -4.60487 | ATTTGACTTCCCTAA TTTAATGT TTA ACATTAAA TTTTTAGCGATAATC Swoo_3591 4384598 - 4385320 + | hypothetical protein Swoo_3592 4385337 - 4385543 + | XRE family transcriptional regulator TERM 4458 4385530 - 4385566 + F 100 -7.5 -5.65927 | gap 1, overlap 4385531 GTGATTTGCTTGAGT ACCTACCTG-AATAGA CGGCAA TCTATTTCAGGTAGGA TTTTTTATTTAACTA TERM 4459 4385531 - 4385565 + F 86 -11 -3.9793 | gap 1, overlap 4385530 TGATTTGCTTGAGTA CCTACCTG-AATAGA CGGCAA TCTATTTCAGGTAGG ATTTTTTATTTAACT TERM 4460 4386625 - 4386603 - g 74 -5.6 -4.64657 | overlap 4386593 4386606 4386607 TGAAATTGTTAAAAA CAACTGCAAT TCA ACTGAAGTTG CAACGGGAAAAAGCT TERM 4461 4386956 - 4386944 - g 78 -5.5 -4.88736 | TAGGAGTCATAAAAA GCGAC AGA GTCAC TGAGCTTAGTTTCAG TERM 4462 4387041 - 4387065 + G 70 -9.3 -3.20382 | opp_overlap 4387032, overlap 4387042 AAAGGAGCAATTGTT TGCATCTGGAG ATA CTCAAGATGCG TTCCTCAATGTGAAA TERM 4463 4387042 - 4387064 + G 74 -10.6 -2.52015 | opp_overlap 4387032, overlap 4387041 AAGGAGCAATTGTTT GCATCTGGAG ATA CTCAAGATGC GTTCCTCAATGTGAA Swoo_3593 4385608 - 4387560 + | peptidase S1 and S6 chymotrypsin/Hap TERM 4464 4387593 - 4387619 + F 91 -10.8 -4.80882 | opp_overlap 4387590 4387593 4387596 TCAATATAAGAAGTA CAACGCGGAGCT GAT GGCCTCGCGTTG TTTTTAATATCGAGT TERM 4465 4387619 - 4387593 - f 75 -10.1 -3.03429 | opp_overlap 4387593, overlap 4387590 4387596 TCAATATAAGAAGTA CAACGCGGAGC TGATG GCCTCGCGTTG TTTTTAATATCGAGT Swoo_3594 4387641 - 4388036 + | putative lipoprotein TERM 4466 4388075 - 4388054 - T 76 -7.3 -4.34008 | opp_overlap 4388054, overlap 4388051 TATCAACTAAAACAA GGAGGCCTT CATC AAAACCTCC TTTTCAATACTCAAT Swoo_3595 4388935 - 4388117 - | Beta-lactamase TERM 4467 4388961 - 4388982 + r 72 -8.8 -3.29263 | opp_overlap 4388960 4388961 TGATAATTAGTAAAG TTGCTCTG AATATA CAGAGCAA TTGTGGCAAAAATCT Swoo_3596 4390053 - 4389028 - | 2-nitropropane dioxygenase NPD Swoo_3597 4390305 - 4390556 + | hypothetical protein TERM 4468 4390591 - 4390612 + T 86 -8.7 -4.53303 | opp_overlap 4390593, overlap 4390593 TCCCTAAAAACAGAA AAGGAGGTC TGTT GACCTCCTC TTTTATATGCGACTC TERM 4469 4390593 - 4390610 + T 86 -11.3 -3.87627 | opp_overlap 4390593, overlap 4390591 CCTAAAAACAGAAAA GGAGGTC TGTT GACCTCC TCTTTTATATGCGAC TERM 4470 4390610 - 4390593 - T 93 -11.3 -4.98672 | opp_overlap 4390591 4390593 CCTAAAAACAGAAAA GGAGGTC TGTT GACCTCC TCTTTTATATGCGAC Swoo_3598 4391910 - 4390636 - | gamma-glutamyl phosphate reductase TERM 4471 4391706 - 4391722 + g 78 -8.7 -4.13767 | ATAATCTGTCTATCA TGGCTTC ACT GAGGCCA TTTTCACGTGCAGCC Swoo_3599 4393072 - 4391954 - | glutamate 5-kinase TERM 4472 4393210 - 4393191 - R 83 -5.7 -5.35721 | opp_overlap 4393191 ATATAACAATAAAAA GGCCACA TAAAAG TGTGACC TTTAACCTATCCGTA Swoo_3600 4394583 - 4393294 - | xanthine/uracil/vitamin C permease TERM 4473 4394652 - 4394635 - R 78 -11.3 -2.75891 | overlap 4394632 ACAGGTAGGTAATGA TGGCGCT AATT AGCGCCA CAAAAAATTAACATT TERM 4474 4394763 - 4394745 - R 100 -14.6 -5.85178 | overlap 4394732 AACAGGCAAAAAAAA GCCTGCTC AAT GAGCAGGC AAAGACTAATTTCAA Swoo_3601 4395060 - 4394962 - | hypothetical protein TERM 4475 4395408 - 4395390 - R 100 -14.6 -6.25578 | ATCAAACAAAAAAAA GCCTGCTC AAT GAGCAGGC AAAGACTAATTTCAA Swoo_3602 4397426 - 4395888 - | peptidase M17 leucyl aminopeptidase domain-containing protein TERM 4476 4396563 - 4396577 + g 70 -7 -4.053 | opp_overlap 4396555 CATCAAACCGGCAAC GGCGGC AGC GCCACC TTTATCTCGGCTCAT Swoo_3603 4397738 - 4399231 + | aminoacyl-histidine dipeptidase TERM 4477 4399281 - 4399239 - T 76 -10.6 -2.78809 | opp_overlap 4399247 4399254 4399258, overlap 4399238 4399236 AAGCATAAACAAGAT GTCGAGTTCCTAGGTTCTAG GTT CTAGGTTCTAGGAATTCGAC CTAGTACCTAGGGCC TERM 4478 4399258 - 4399296 + T 90 -11.8 -4.17316 | opp_overlap 4399239 4399238 4399236, overlap 4399247 4399254 AGTTCCTAGGTTCTA GGTTCTAGGTTCTAGG AATTCGA CCTAGTACCTAGGGCC TTCTTTTAAAAACCT Swoo_3604 4400396 - 4399302 - | DNA-directed DNA polymerase TERM 4479 4400514 - 4400492 - R 100 -12.1 -5.27335 | TTTTGCAAATAAAAA TGCCAGTCA TCACC TGACTGGCA TTGAAACAACTAAGT Swoo_3605 4402540 - 4400540 - | methyl-accepting chemotaxis sensory transducer TERM 4480 4402553 - 4402563 + r 76 -2.6 -5.46629 | CATAAGAGAAAACCT TAAT GTT ATTA TTTTTTTAAGGTATT Swoo_3606 4402900 - 4402712 - | hypothetical protein TERM 4481 4403006 - 4403026 + r 100 -14.1 -3.45571 | opp_overlap 4403006, overlap 4403000 TACACATATAAAAAA GGCTTAGCA TAG TGCTAAGCC TTCCTATTTCGCCCA TERM 4482 4403026 - 4403006 - R 100 -14.1 -5.4492 | opp_overlap 4403006 4403000 TACACATATAAAAAA GGCTTAGCA TAG TGCTAAGCC TTCCTATTTCGCCCA Swoo_3607 4403523 - 4403056 - | bacterioferritin Swoo_3608 4404003 - 4403533 - | bacterioferritin Swoo_3609 4405363 - 4404377 - | diguanylate cyclase TERM 4483 4404906 - 4404917 + g 70 -5.8 -4.32857 | opp_overlap 4404906, overlap 4404908 ACTTTCGTCAAACGA GGCA GAAA TGCC TTTCTGTTTAACAAG TERM 4484 4405550 - 4405575 + r 72 -6.1 -4.40184 | opp_overlap 4405552, overlap 4405552 GTTCCGGACACAAAA AAGGGCATGAC ATCT GTCATACCCTA TTTATCTTTACTTCA TERM 4485 4405552 - 4405573 + r 76 -8.7 -3.79096 | opp_overlap 4405552, overlap 4405550 TCCGGACACAAAAAA GGGCATGAC ATCT GTCATACCC TATTTATCTTTACTT TERM 4486 4405573 - 4405552 - R 100 -10.9 -5.36441 | opp_overlap 4405552 4405550 TCCGGACACAAAAAA GGGCATGAC ATCT GTCATACCC TATTTATCTTTACTT Swoo_3610 4405829 - 4405605 - | hypothetical protein Swoo_3611 4406950 - 4405934 - | ApbE family lipoprotein TERM 4487 4406630 - 4406644 + g 71 -7.8 -3.74747 | opp_overlap 4406630 ATCAGTCACTTCAAA GAGGTG AAT CGCCTC TTTAATCACAGTTGC TERM 4488 4406653 - 4406682 + g 73 -10.1 -3.07895 | opp_overlap 4406653 4406655, overlap 4406655 TCGCCTCTTTAATCA CAGTTGCGGTATC GGCA GATACAGTAACTG TCTCTTCAAAGTCCG TERM 4489 4406928 - 4406906 - G 100 -4.1 -5.64421 | AGCTGAAATAAAAAA GGCTAGCCC AATAA AAGCTAACC ATTTTACAGCGGTCT TERM 4490 4407002 - 4407031 + r 81 -10.7 -3.57462 | opp_overlap 4407004, overlap 4407004 ATTCTAATTTAATGA AAGAGAGCGAGGC AACT GCCTCACTCTCTG TTTCAAACTCGAATA TERM 4491 4407029 - 4407004 - R 100 -15.5 -3.95986 | opp_overlap 4407002 4407004 TCTAATTTAATGAAA GAGAGCGAGGC AACT GCCTCACTCTC TGTTTCAAACTCGAA TERM 4492 4407004 - 4407029 + r 100 -13.3 -3.36515 | opp_overlap 4407004, overlap 4407002 TCTAATTTAATGAAA GAGAGCGAGGC AACT GCCTCACTCTC TGTTTCAAACTCGAA Swoo_3612 4408329 - 4407082 - | NADH:ubiquinone oxidoreductase, subunit F Swoo_3613 4408983 - 4408375 - | NADH:ubiquinone oxidoreductase, subunit E TERM 4493 4408791 - 4408754 - G 70 -10.5 -2.57162 | AAAAAGCTCAAGTCA GCTTCTGGCGCACCAGC CCAA GCCAACGCACCAGGAGC AAGAAGTCCCTGATA Swoo_3614 4409621 - 4408989 - | NADH:ubiquinone oxidoreductase, subunit D Swoo_3615 4410415 - 4409621 - | NADH:ubiquinone oxidoreductase, subunit C Swoo_3616 4411607 - 4410408 - | NADH:ubiquinone oxidoreductase, subunit B TERM 4494 4411174 - 4411136 - G 71 -3.9 -4.74103 | gap 1, opp_overlap 4411143 4411148, overlap 4411137 4411148 GCGTTAATGCAAAAA GCACTGAGGT-AACGAAG AAAC CTTCGTTAACTTCATGGC CACGCACTGCAGCAA Swoo_3617 4413025 - 4411607 - | NADH:ubiquinone oxidoreductase, subunit A TERM 4495 4412863 - 4412879 + g 70 -9.5 -2.96152 | overlap 4412866 AAGTAGCTACACGTT TAATGGC TGG GCCATTA TGTATGACTTGCTCT TERM 4496 4413121 - 4413141 + r 72 -7.5 -3.82117 | overlap 4413120 GCCATGAAAAATGTG GGCCATTTC ACT GGATTGGCC TCTTTTATGCGTGGC TERM 4497 4413431 - 4413451 + r 76 -4 -5.28176 | opp_overlap 4413405 4413434, overlap 4413434 ACCATAGGTATAAAA AAAGCGAT CTTAA ATCGCTTA TTTTTTATCAGTGAC TERM 4498 4413448 - 4413434 - R 90 -6.4 -5.65177 | opp_overlap 4413431 4413434, overlap 4413405 ATAGGTATAAAAAAA GCGATC TTA AATCGC TTATTTTTTATCAGT TERM 4499 4413434 - 4413448 + r 74 -5.7 -4.73105 | opp_overlap 4413405 4413434, overlap 4413431 ATAGGTATAAAAAAA GCGAT CTTAA ATCGC TTATTTTTTATCAGT Swoo_3618 4413983 - 4413474 - | quorum-sensing autoinducer 2 (AI-2), LuxS Swoo_3619 4415197 - 4414103 - | TRAP dicarboxylate transporter- DctP subunit Swoo_3620 4416639 - 4415275 - | TRAP dicarboxylate transporter, DctM subunit TERM 4500 4415740 - 4415728 - G 71 -4.8 -4.48583 | opp_overlap 4415728 4415735, overlap 4415730 4415735 4415737 AATCAAGATAAGAAA CACC ATAGA GGTG ATCTTAGTTGTGCTA TERM 4501 4415735 - 4415766 + g 93 -11.8 -4.08216 | gap 1, opp_overlap 4415728 4415730 4415735 4415737, overlap 4415728 ATAAGAAACACCATA GAGGTGAT-CTTAGT TGT GCTAAGCATCACCTC TTTTAACAGGGGTAG TERM 4502 4415766 - 4415735 - G 76 -11.1 -3.02508 | gap 1, opp_overlap 4415728 4415735, overlap 4415728 4415730 4415737 ATAAGAAACACCATA GAGGTGAT-CTTAG TTGTG CTAAGCATCACCTC TTTTAACAGGGGTAG TERM 4503 4415854 - 4415824 - G 73 -10.4 -3.07113 | CATTAGCGCACCGAA TGCGCCAACAGATG CAG CTTCTGTCGGCGTA GCAATACCGAGTAAT TERM 4504 4416386 - 4416412 + g 89 -10.2 -4.46212 | opp_overlap 4416373 4416393 AGCTCTGCCATACTG GTCAGAAGTTGC TCT GCCACTTTTGAC TTTTCTAATACCACG Swoo_3621 4417160 - 4416639 - | tripartite ATP-independent periplasmic transporter DctQ TERM 4505 4417341 - 4417301 - R 100 -17.9 -3.767 | opp_overlap 4417306 4417334, overlap 4417306 TAGGGACTTATTAAA CAAAAGAGCCTGAAAATAG GGG CTATTCTCAGGCTCTTTCA GCAAAGGGTTCGCTT TERM 4506 4417336 - 4417306 - R 100 -17.8 -4.9448 | opp_overlap 4417306 4417334, overlap 4417301 ACTTATTAAACAAAA GAGCCTGAAAATAG GGG CTATTCTCAGGCTC TTTCAGCAAAGGGTT TERM 4507 4417306 - 4417336 + r 100 -15.6 -3.53343 | opp_overlap 4417306 4417301, overlap 4417334 ACTTATTAAACAAAA GAGCCTGAAAATAG GGG CTATTCTCAGGCTC TTTCAGCAAAGGGTT Swoo_3622 4417655 - 4417356 - | BolA family protein Swoo_3623 4418272 - 4417769 - | glycine cleavage system regulatory protein-like protein Swoo_3624 4418992 - 4418354 - | 2OG-Fe(II) oxygenase TERM 4508 4418833 - 4418821 - G 71 -7.7 -3.86015 | GAGTTTGGCCATAAA CCTGA ACT TCAGG GCGAGATAGCGGGTA Swoo_3625 4419087 - 4420346 + | rRNA (guanine-N(2)-)-methyltransferase Swoo_3626 4421484 - 4421140 - | hypothetical protein Swoo_3627 4422865 - 4421888 - | hypothetical protein TERM 4509 4423008 - 4422993 - R 76 -9 -3.81626 | opp_overlap 4422987 GAAGAAATGTAATAA GCCTTC ATTC GAAGGC TAGCTAATTTTGAGG Swoo_3628 4424168 - 4423041 - | hypothetical protein Swoo_3629 4425768 - 4424263 - | putative transcriptional regulator, CadC TERM 4510 4424469 - 4424459 - G 87 -8.2 -5.09225 | opp_overlap 4424458 4424459 AGGGTATTTAAAAAA GCGG TTT CCGC CTTTTCCATCTTGCC TERM 4511 4424841 - 4424857 + g 78 -6.5 -4.63184 | TTTGTAACGCTATGG CGCGATG AAT CATCTCG TTTTTAAGCTCACTT TERM 4512 4425370 - 4425343 - G 71 -2 -5.07567 | gap 1, opp_overlap 4425351, overlap 4425346 TGATACGGTAAAAAA GTAGAG-AGGCAA AGC TTGCTTACTCTTC CCCCAACCAAGTAGT Swoo_3630 4426460 - 4425897 - | OmpA-like transmembrane domain-containing protein TERM 4513 4428982 - 4428962 - g 76 -10.5 -3.35798 | opp_overlap 4428961 4428965, overlap 4428965 ACCCGCTATTTAGAA GAAGACAAG TTT CTCGTCTTC GTCCCTTAACTAAGA Swoo_3633 4427552 - 4428991 + | long-chain-fatty-acyl-CoA reductase Swoo_3634 4429009 - 4429926 + | acyl transferase TERM 4514 4430582 - 4430570 - g 79 -2.6 -5.38249 | ACCAATGAGAAAAAA GCCC AGATG GAGC TCTACAATGAGATAG TERM 4515 4430697 - 4430678 - g 77 -2.1 -5.40464 | opp_overlap 4430678 CACGATAAACAAAAA GCACG GGAGGTATGT CGTGC CTTCCTAACTAATTG Swoo_3635 4429967 - 4431037 + | alkanal monooxygenase TERM 4516 4431897 - 4431887 - g 74 -6.8 -4.40237 | GATCATAGAGGAAAA TGCC ATC GGCA CTAATGATGATTACT TERM 4517 4432023 - 4431995 - g 73 -6.1 -4.30909 | opp_overlap 4432004, overlap 4432004 GAGAGACCAAAATAA GGTTAAAAATATC ATT GATATGGTTAACC AGAAAATCTTCAAGA Swoo_3636 4431069 - 4432049 + | alkanal monooxygenase TERM 4518 4432089 - 4432061 - f 100 -11.9 -5.13741 | opp_overlap 4432066 TTAACCCAACAAAAA TGAAATGGCAG ATAAATA CTGCCATTTCA CCTTAACTCGACTTT Swoo_3637 4432125 - 4433273 + | long-chain-fatty-acid--luciferin-component ligase TERM 4519 4433336 - 4433314 - g 73 -5 -4.59853 | opp_overlap 4433317, overlap 4433317 TGAATCGGCCAAAAA CAATATATAC AAG GTATATATTT CACCTGAACAGAATA TERM 4520 4433333 - 4433317 - g 74 -6.7 -4.40963 | opp_overlap 4433317, overlap 4433314 ATCGGCCAAAAACAA TATATAC AAG GTATATA TTTCACCTGAACAGA Swoo_3638 4433270 - 4433980 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 4521 4434091 - 4434069 - T 87 -10.7 -4.29326 | opp_overlap 4434069 TTTAAAGTGAACAAA CACTATTGG TAACT CCAATAGTG TTTTACCTAGAATTG TERM 4522 4434069 - 4434091 + T 85 -10.7 -4.19704 | opp_overlap 4434069 TTTAAAGTGAACAAA CACTATTGG TAACT CCAATAGTG TTTTACCTAGAATTG Swoo_3639 4435297 - 4434230 - | hypothetical protein Swoo_3640 4435974 - 4435402 - | OmpA domain-containing protein TERM 4523 4435817 - 4435805 - G 71 -7.7 -3.76607 | TAATACAGATCGAAA GTGAC ACT GTCAC TGAAACTTGCTTGAC Swoo_3641 4436135 - 4436701 + | hypothetical protein TERM 4524 4436999 - 4437023 + G 76 -10 -3.37354 | opp_overlap 4436998, overlap 4437001 TTAGATCTTAAGCAG GAGGAGCGTC CAGTT GACGCTCCTA TTATCAATGAGTCTG TERM 4525 4437001 - 4437021 + G 86 -12.6 -3.254 | opp_overlap 4436998, overlap 4436999 AGATCTTAAGCAGGA GGAGCGTC CAGTT GACGCTCC TATTATCAATGAGTC Swoo_3642 4436735 - 4437319 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Swoo_3643 4437427 - 4437759 + | hypothetical protein TERM 4526 4437791 - 4437764 - f 74 -10 -2.59154 | opp_overlap 4437769, overlap 4437727 4437769 TAATACCATAGTAAG CAAAATCCGGAT ACCT ATCCGGATTTTT TATGCCTAAATCATA TERM 4527 4437769 - 4437786 + F 100 -9.9 -5.28176 | opp_overlap 4437727 4437764 4437769 CCATAGTAAGCAAAA TCCGGAT ACCT ATCCGGA TTTTTTATGCCTAAA TERM 4528 4437786 - 4437769 - f 89 -9.9 -4.4773 | opp_overlap 4437769, overlap 4437727 4437764 CCATAGTAAGCAAAA TCCGGAT ACCT ATCCGGA TTTTTTATGCCTAAA TERM 4529 4438365 - 4438349 - g 72 -9.4 -3.23183 | overlap 4438345 4438344 CCAGAGAAGATGCAA GCCGCA CTTGC TGCGGC CTATCAAGTTGGCTA Swoo_3644 4437884 - 4439302 + | major facilitator transporter Swoo_3645 4439338 - 4439484 + | hypothetical protein TERM 4530 4439529 - 4439553 + T 80 -5.8 -5.16206 | opp_overlap 4439529 TTAAATAACAAAAAA CGCTTAAG ATGCTCTCC CTTAAGCG TTTTTATCTTAATTT TERM 4531 4439553 - 4439529 - T 100 -6.5 -5.72254 | opp_overlap 4439529 TTAAATAACAAAAAA CGCTTAAGA TGCTCTC CCTTAAGCG TTTTTATCTTAATTT Swoo_3646 4440069 - 4439584 - | hypothetical protein Swoo_3647 4440218 - 4440583 + | VanZ family protein Swoo_3648 4440598 - 4441557 + | 2-dehydropantoate 2-reductase Swoo_3649 4441702 - 4443198 + | sodium:neurotransmitter symporter TERM 4532 4443337 - 4443297 - T 79 -10 -3.39955 | gap 1, opp_overlap 4443304 4443310 4443334, overlap 4443301 4443310 AAATCCAAAACTTAA TCCAGT-ATAAAAAGCCCC TTTC GGGGCTTTTTATTACTCAA GCAAGCTGACTTGCT TERM 4533 4443333 - 4443301 - T 89 -13 -2.6027 | gap 1, opp_overlap 4443304 4443310, overlap 4443297 4443310 CCAAAACTTAATCCA GT-ATAAAAAGCCCC TTTC GGGGCTTTTTATTAC TCAAGCAAGCTGACT TERM 4534 4443304 - 4443329 + T 100 -14.9 -3.14211 | opp_overlap 4443301 4443297 4443310, overlap 4443310 AAACTTAATCCAGTA TAAAAAGCCCC TTTC GGGGCTTTTTA TTACTCAAGCAAGCT TERM 4535 4443323 - 4443310 - T 91 -9.5 -4.92783 | opp_overlap 4443304 4443310, overlap 4443301 4443297 AATCCAGTATAAAAA GCCCC TTTC GGGGC TTTTTATTACTCAAG TERM 4536 4443310 - 4443323 + T 91 -9.5 -5.1356 | opp_overlap 4443310 4443301 4443297, overlap 4443304 AATCCAGTATAAAAA GCCCC TTTC GGGGC TTTTTATTACTCAAG Swoo_3650 4444778 - 4443330 - | sulfatase TERM 4537 4444836 - 4444811 - R 74 -9.7 -2.83798 | overlap 4444808 4444813 ATCAAATTAACATCA TAGCTGGGCTC GATT AAGCCCTGCTA AACACAGAGATTTAC Swoo_3651 4446299 - 4444848 - | sulfatase TERM 4538 4447835 - 4447825 - g 72 -8.2 -3.96624 | CACCTTCACCACAAA GCGG GAA CCGC CGGCAGCCAATGTGT TERM 4539 4448374 - 4448348 - g 71 -8 -3.75024 | TCGCAGCAGCAAGAA CCCTTAGCGCTG ATA CAAAGCTAAAGG CAACTCAAGAGCTAA Swoo_3652 4446730 - 4448919 + | TPR repeat-containing protein TERM 4540 4448949 - 4448971 + T 79 -4.9 -5.29445 | opp_overlap 4448944 4448949 TTTAAAGGAAGAAAA CCAGAAG CTGTCATGA CTTCTGG TTTTTGTTGTTGGAA TERM 4541 4448971 - 4448949 - T 74 -5.6 -4.84642 | opp_overlap 4448949, overlap 4448944 TTTAAAGGAAGAAAA CCAGAAGC TGTCATG ACTTCTGG TTTTTGTTGTTGGAA Swoo_3653 4450091 - 4449006 - | hypothetical protein TERM 4542 4449654 - 4449668 + g 71 -8.6 -3.53444 | overlap 4449640 4449639 GTTTGACCATAGTGG GCGAAA CTT TTTCGC TTTCCAGAAAAATGG TERM 4543 4450327 - 4450296 - R 100 -12.4 -5.75945 | ATTGGGCAAAAAAAA CCGAATTCAGGGCT TAAC AAACCTGAATTCGG CAAACAAAAGGAAAA Swoo_3654 4452005 - 4450536 - | sulfatase Swoo_3655 4453587 - 4452007 - | sulfatase Swoo_3656 4455413 - 4453587 - | hypothetical protein Swoo_3657 4456910 - 4455426 - | sulfatase TERM 4544 4457117 - 4457089 - R 100 -9 -5.40474 | opp_overlap 4457094, overlap 4457094 ATCCCTGTAAAAAAA GAAAAGGCTTCA ATACA TGAAGCCTTTTT TATTCAATCAAAATA TERM 4545 4457094 - 4457112 + r 100 -8.9 -5.4833 | opp_overlap 4457089 4457094 TGTAAAAAAAGAAAA GGCTTCA ATACA TGAAGCC TTTTTTATTCAATCA TERM 4546 4457112 - 4457094 - R 100 -8.9 -5.55855 | opp_overlap 4457094, overlap 4457089 TGTAAAAAAAGAAAA GGCTTCA ATACA TGAAGCC TTTTTTATTCAATCA Swoo_3658 4459822 - 4457138 - | TonB-dependent receptor TERM 4547 4460044 - 4460033 - H 90 -3 -5.89921 | AGTACAACAAAAAAA GTAA CAAA TTAC AAATAATTCACTTAA TERM 4548 4461448 - 4461438 - g 76 -4 -5.10767 | CAGCCAAGAGAAAAA TAAC CTT GTTA ATCAAAACCCTGAAA Swoo_3659 4460119 - 4461573 + | sulfatase TERM 4549 4461772 - 4461791 + G 75 -9.4 -3.48036 | opp_overlap 4461770 TAAACCTAACTTAGT GATCATCT ATGC AGATGATC TTGGTTATGGTGATA Swoo_3660 4461632 - 4463203 + | sulfatase TERM 4550 4463248 - 4463275 + T 100 -18.6 -4.4017 | opp_overlap 4463248 4463254, overlap 4463254 ATAATCTAGCCAAAA CAGAAAGGAGCC TTCA GGCTCCTTTCTG TTTTCTGCAACTTAA TERM 4551 4463275 - 4463248 - T 100 -18.6 -4.21676 | opp_overlap 4463248 4463254, overlap 4463254 ATAATCTAGCCAAAA CAGAAAGGAGCC TTCA GGCTCCTTTCTG TTTTCTGCAACTTAA TERM 4552 4463269 - 4463254 - T 89 -10.4 -4.46775 | opp_overlap 4463248 4463254, overlap 4463248 TAGCCAAAACAGAAA GGAGCC TTCA GGCTCC TTTCTGTTTTCTGCA TERM 4553 4463254 - 4463269 + T 89 -10.4 -4.51238 | opp_overlap 4463254 4463248, overlap 4463248 TAGCCAAAACAGAAA GGAGCC TTCA GGCTCC TTTCTGTTTTCTGCA Swoo_3661 4464799 - 4463297 - | sulfatase Swoo_3662 4466034 - 4464796 - | galactokinase Swoo_3663 4467279 - 4466269 - | UDP-glucose 4-epimerase TERM 4554 4466667 - 4466642 - G 73 -2.5 -5.04987 | gap 1, overlap 4466643 AACACCTGTAAAAAA TCTC-GTTTGCC AAC GGCAACCTGAGC AATATATGGCATCAA TERM 4555 4467209 - 4467195 - G 76 -6.4 -4.4831 | AGTTATCAAAAATAA CAGGTT CAA AACCCG ACTCTAGCAGTGCTA TERM 4556 4467422 - 4467372 - R 81 -7 -4.84359 | opp_overlap 4467379 4467383, overlap 4467376 TCATCTTTATAAAAA GGCACTACAAATCAACTTAGTAAA ACT TTTACTGAGATGATTTGTTGCATC GCATTGATAAAGAAA TERM 4557 4467418 - 4467376 - R 78 -10.8 -2.88667 | opp_overlap 4467379 4467383, overlap 4467372 CTTTATAAAAAGGCA CTACAAATCAACTTAGTAAA ACT TTTACTGAGATGATTTGTTG CATCGCATTGATAAA TERM 4558 4467379 - 4467415 + r 95 -13.3 -3.08173 | opp_overlap 4467376 4467372, overlap 4467383 TATAAAAAGGCACTA CAAATCAACTTAGTAAA ACT TTTACTGAGATGATTTG TTGCATCGCATTGAT TERM 4559 4467383 - 4467411 + r 82 -8.3 -4.20783 | opp_overlap 4467376 4467372, overlap 4467379 AAAAGGCACTACAAA TCAACTTAGTAAA ACT TTTACTGAGATGA TTTGTTGCATCGCAT Swoo_3664 4468472 - 4467558 - | SMP-30/gluconolaconase/LRE domain-containing protein Swoo_3665 4469529 - 4468582 - | 2-keto-3-deoxy-galactonokinase Swoo_3666 4470297 - 4469530 - | short-chain dehydrogenase/reductase SDR TERM 4560 4470426 - 4470415 - H 70 -3 -5.14563 | TCTCTCACTAAAAAA TTTC GACC GAAA CAGTGTAAACCTCCG Swoo_3667 4470739 - 4471476 + | GntR domain-containing protein TERM 4561 4471555 - 4471530 - T 79 -10.5 -3.36492 | opp_overlap 4471535, overlap 4471535 TGTTTAAGCTCATAA TAAAATCGGCC AACT GGCCGATTTTT CGTTCCAATAGACCA TERM 4562 4471535 - 4471550 + T 93 -10.4 -4.87291 | opp_overlap 4471530 4471535 AAGCTCATAATAAAA TCGGCC AACT GGCCGA TTTTTCGTTCCAATA TERM 4563 4471550 - 4471535 - T 91 -10.4 -4.78839 | opp_overlap 4471535, overlap 4471530 AAGCTCATAATAAAA TCGGCC AACT GGCCGA TTTTTCGTTCCAATA Swoo_3668 4472418 - 4471573 - | LysR family transcriptional regulator TERM 4564 4472384 - 4472369 - G 82 -9 -4.25104 | GCTGCCCGACCAAAA TGGCGA GTTT TCGCCA CCTCTAAAAAGGTTT Swoo_3669 4472586 - 4472966 + | hypothetical protein TERM 4565 4473024 - 4472998 - g 87 -8 -5.14965 | ACCTTCATCAAAAAA GGAGAGGTTTTC TCA GGAAAGCTCTCC ACCTCAGGCTGCTTA Swoo_3670 4472953 - 4474971 + | hypothetical protein TERM 4566 4474989 - 4475022 + F 72 -6.9 -4.02424 | opp_overlap 4474991 4474995, overlap 4474991 4474995 TCAAAATAGTTGAAG CATAAATGCATGC AGCTCTTA GCATGCATTTATC TTTATAATGATTGGT TERM 4567 4474991 - 4475020 + F 78 -9.5 -3.59935 | opp_overlap 4474991 4474995, overlap 4474989 4474995 AAAATAGTTGAAGCA TAAATGCATGC AGCTCTTA GCATGCATTTA TCTTTATAATGATTG TERM 4568 4475020 - 4474991 - f 72 -9.5 -2.76651 | opp_overlap 4474991 4474989 4474995, overlap 4474995 AAAATAGTTGAAGCA TAAATGCATGC AGCTCTTA GCATGCATTTA TCTTTATAATGATTG TERM 4569 4474995 - 4475016 + F 72 -5.9 -4.41609 | opp_overlap 4474995 4474991, overlap 4474991 4474989 TAGTTGAAGCATAAA TGCATGC AGCTCTTA GCATGCA TTTATCTTTATAATG Swoo_3671 4475363 - 4476004 + | phosphoesterase PA-phosphatase related Swoo_3672 4476892 - 4476020 - | hypothetical protein TERM 4570 4477151 - 4477131 - R 100 -10.4 -5.38249 | ACCAATCAGAAAAAA GCCCCAAC GTGAT GTCGGGGC TTGAAACTAACAGGA Swoo_3673 4478738 - 4477182 - | AbgT putative transporter Swoo_3674 4480111 - 4479263 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 4571 4480150 - 4480132 - R 89 -12.4 -3.34398 | opp_overlap 4480131 4480132, overlap 4480130 CTTCTCTCTTAAAGA GCCAAGGC TGT GCCTCGGC GTTAATCAATTCAAT TERM 4572 4480132 - 4480150 + r 73 -10.2 -2.53112 | opp_overlap 4480132 4480130, overlap 4480131 CTTCTCTCTTAAAGA GCCAAGGC TGT GCCTCGGC GTTAATCAATTCAAT Swoo_3675 4481440 - 4480187 - | hypothetical protein TERM 4573 4481551 - 4481528 - R 90 -11.8 -4.00084 | overlap 4481523 ACGATCAAAATATAA GACGGTAGTC CCTG AACTACCGTC ATCAAGCTCACTAAT Swoo_3676 4482355 - 4481567 - | hypothetical protein TERM 4574 4482264 - 4482274 + g 70 -6.8 -4.11484 | opp_overlap 4482264 AGCCAAGCCCAATTA GCTG ACT CAGC TTTTGAAAAGTTCAG Swoo_3677 4482750 - 4482355 - | invasion gene expression up-regulator SirB Swoo_3678 4482983 - 4483414 + | GCN5-related N-acetyltransferase TERM 4575 4483495 - 4483466 - T 100 -8.7 -5.66229 | gap 1, opp_overlap 4483466 AGGAATAAGAAAAAA GCCCTAAA-TGAGT CAA ACTCAACCTAGGGC TTATATAAGTTTCAA Swoo_3679 4484673 - 4483540 - | hypothetical protein Swoo_3680 4485077 - 4485379 + | hypothetical protein TERM 4576 4485376 - 4485362 - T 85 -10 -4.1021 | TGTGACAATTACAAA GAGCTG ATA CAGCTC TAAATGATACTGACT TERM 4577 4485435 - 4485413 - T 72 -4.8 -4.83169 | opp_overlap 4485419, overlap 4485419 ATGCGGTTAGAAAAA CACAAACGCC ATT GGCATTAATG AAATACCAACGGCGT TERM 4578 4485419 - 4485449 + T 70 -8.3 -3.3458 | opp_overlap 4485413 4485419 TTAGAAAAACACAAA CGCCATTGGCATT AATGA AATACCAACGGCG TTAAATTCTTTACTG TERM 4579 4485449 - 4485419 - T 100 -12.7 -4.60808 | opp_overlap 4485419, overlap 4485413 TTAGAAAAACACAAA CGCCATTGGCATT AATGA AATACCAACGGCG TTAAATTCTTTACTG Swoo_3683 4487630 - 4486407 - | transposase IS204/IS1001/IS1096/IS1165 family protein TERM 4580 4487493 - 4487470 - G 83 -11 -3.57783 | GGACGAGAATCATAA TGTCGGCCAG CTTG CTGGCAGACA GGACAAACGAGATCA TERM 4581 4488019 - 4488003 - R 73 -9.5 -2.92265 | overlap 4488000 AGCGATAGATAACTA TGAAGGT ACG ACCTTCA AACAAACTATCCAAT TERM 4582 4488147 - 4488126 - R 79 -9.5 -3.81548 | AATCAGATAATATAA TCAGCCTTC ATTC GAAGGCTAA CAAGTTTTGTCGTTC TERM 4583 4488175 - 4488203 + r 100 -13.3 -3.52539 | opp_overlap 4488175 TTCTACAAACAAAAA CGCCATTGGTA TGAGAGC TACCAATGGCG TTCTAATTCACCTTA TERM 4584 4488203 - 4488175 - R 100 -13.3 -5.38054 | opp_overlap 4488175 TTCTACAAACAAAAA CGCCATTGGTA TGAGAGC TACCAATGGCG TTCTAATTCACCTTA Swoo_3684 4489154 - 4488312 - | protein-(glutamine-N5) methyltransferase, release factor-specific Swoo_3685 4490295 - 4489210 - | peptide chain release factor 1 Swoo_3686 4491561 - 4490311 - | glutamyl-tRNA reductase TERM 4585 4490365 - 4490391 + g 72 -8.7 -3.66288 | AATGCTATTCAAATC GCCTTGGCGGC TCGCT GCTGTTAAGGC TTGTGTTGGCGCGTG TERM 4586 4491464 - 4491479 + g 76 -6.2 -4.52589 | CATTTCGCCAAACTC TTCATG GCAT CATGAA TTTTGTCTGGAGAAA TERM 4587 4492326 - 4492306 - g 75 -5.3 -4.84359 | TTACTTTCAGAAAAA GACTCACCA CCT TGGAGGGTC GAGTTTAATAGCTGG Swoo_3687 4491832 - 4492473 + | outer membrane lipoprotein LolB Swoo_3688 4492476 - 4493330 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Swoo_3689 4493374 - 4494348 + | ribose-phosphate pyrophosphokinase TERM 4588 4494374 - 4494390 + T 100 -12.3 -5.28778 | opp_overlap 4494374 TGCGCATCAAAAAAA CGCACTC ACT GAGTGCG TTTTTTATGGCTAAT TERM 4589 4494390 - 4494374 - T 100 -12.3 -5.52384 | opp_overlap 4494374 TGCGCATCAAAAAAA CGCACTC ACT GAGTGCG TTTTTTATGGCTAAT Swoo_3690 4495097 - 4494684 - | hypothetical protein Swoo_3691 4495555 - 4495109 - | hypothetical protein TERM 4590 4495709 - 4495692 - R 100 -12.7 -5.28176 | opp_overlap 4495692 TTTAGGCACAAAAAA GCCCGTC ATAA GACGGGC TTTTTTGTATATGGC TERM 4591 4495692 - 4495709 + r 100 -12.7 -5.4251 | opp_overlap 4495692 TTTAGGCACAAAAAA GCCCGTC ATAA GACGGGC TTTTTTGTATATGGC TERM 4592 4496005 - 4495991 - R 100 -10 -5.24989 | opp_overlap 4495989 TGATAGATGAAAAAA CCTGTC ATA GACAGG TCTAAATTGGCTGGG TERM 4593 4496660 - 4496676 + r 71 -9.5 -2.62396 | overlap 4496662 TTGAACCTGCGACCC CAGCATT ATG AATGCTG TGCTCTAACCAGCTG TERM 4594 4497159 - 4497175 + r 71 -9.5 -2.62396 | overlap 4497161 TTGAACCTGCGACCC CAGCATT ATG AATGCTG TGCTCTAACCAGCTG TERM 4595 4497436 - 4497413 - R 100 -12.6 -5.84011 | opp_overlap 4497413 AACAAAAAACAAAAA TGGCTCAATT CTTC AATTGAGCCA TTTGCTTTAGCAATA TERM 4596 4497413 - 4497436 + r 100 -12.6 -4.06502 | opp_overlap 4497413 AACAAAAAACAAAAA TGGCTCAATT CTTC AATTGAGCCA TTTGCTTTAGCAATA Swoo_3692 4498571 - 4497480 - | GTP-binding protein YchF TERM 4597 4498649 - 4498635 - R 82 -9.2 -4.12532 | opp_overlap 4498635 TTGGGTATATACAAA GCCGCC ATC GGCGAC TTAATCAAATTCTTG Swoo_3693 4499282 - 4498698 - | aminoacyl-tRNA hydrolase Swoo_3694 4500750 - 4499554 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Swoo_3695 4500949 - 4501251 + | hypothetical protein Swoo_3696 4501351 - 4502775 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 4598 4502787 - 4502825 + F 91 -12.6 -3.17622 | opp_overlap 4502796, overlap 4502796 TTAAAATCACACCGT AACAAAAAAGGCGGCATA GTT TATGCTGCCTTTTTCGTC TCTATTGTGCCGGTA TERM 4599 4502816 - 4502796 - f 100 -9.7 -5.46657 | opp_overlap 4502787 4502796 CACCGTAACAAAAAA GGCGGCATA GTT TATGCTGCC TTTTTCGTCTCTATT TERM 4600 4502796 - 4502816 + F 100 -11.9 -4.87037 | opp_overlap 4502796, overlap 4502787 CACCGTAACAAAAAA GGCGGCATA GTT TATGCTGCC TTTTTCGTCTCTATT Swoo_3697 4502912 - 4503955 + | PhoH family protein Swoo_3698 4503945 - 4504421 + | hypothetical protein Swoo_3699 4504473 - 4505348 + | CBS domain-containing protein TERM 4601 4505976 - 4505964 - g 88 -9.1 -4.57569 | CTATGTCTGCAAAAA CGCTG GCA CAGCG CCGCAATCATCTTGC Swoo_3700 4505391 - 4506938 + | apolipoprotein N-acyltransferase TERM 4602 4507001 - 4506949 - T 83 -11.6 -3.15768 | gap 1, opp_overlap 4506966 4506989, overlap 4506951 4506954 4506966 ACTAAAATTTCAATA TACTATC-TCCAAAAAAATACCCGC TGAT GCGGGTATTTTTTTGGATGATTCAA ATCATCAAATCCATT TERM 4603 4506999 - 4506951 - T 95 -14.2 -3.13141 | gap 1, opp_overlap 4506966 4506989, overlap 4506949 4506954 4506966 TAAAATTTCAATATA CTATC-TCCAAAAAAATACCCGC TGAT GCGGGTATTTTTTTGGATGATTC AAATCATCAAATCCA TERM 4604 4506996 - 4506954 - T 100 -20.3 -2.76093 | gap 1, opp_overlap 4506966 4506989, overlap 4506951 4506949 4506966 AATTTCAATATACTA TC-TCCAAAAAAATACCCGC TGAT GCGGGTATTTTTTTGGATGA TTCAAATCATCAAAT TERM 4605 4506966 - 4506983 + T 100 -11.3 -5.49729 | opp_overlap 4506954 4506951 4506949 4506966 CTATCTCCAAAAAAA TACCCGC TGAT GCGGGTA TTTTTTTGGATGATT TERM 4606 4506983 - 4506966 - T 100 -11.3 -5.42259 | opp_overlap 4506966, overlap 4506954 4506951 4506949 CTATCTCCAAAAAAA TACCCGC TGAT GCGGGTA TTTTTTTGGATGATT Swoo_3701 4507518 - 4507018 - | hypothetical protein TERM 4607 4507984 - 4507968 - g 75 -5.1 -4.82667 | CGATTACATGAAAAA CCAGC TAAAAAT GCTGG GCTTTGGTTATGACT TERM 4608 4508240 - 4508222 - g 74 -7.4 -4.25283 | AGTGGTTCATTAAAA TCACCGAC TAC GCCGATGA GCTTCTCAGTGATAT TERM 4609 4508657 - 4508679 + G 78 -10 -3.67417 | TGATGTCAGTACCAG CTCATGATCA ACG TGATTATGAG TTTGCGATTAAATAT TERM 4610 4509991 - 4509975 - g 72 -9.5 -3.24032 | opp_overlap 4509978, overlap 4509978 4509981 ACTTGGGAACGAAGA GAACATC GAA GATGTTC GTTGGCCTGAAGCCG Swoo_3702 4507639 - 4510218 + | leucyl-tRNA synthetase TERM 4611 4510237 - 4510271 + F 74 -9.4 -3.20858 | gap 1, opp_overlap 4510232 4510237, overlap 4510270 AACCTTGAAAGTAGA TGCCAAGCCGATGCA ATAAAC TGC-TAGGCTTGGCA TTAATCAATGTGATA TERM 4612 4510271 - 4510237 - f 75 -10.1 -3.01269 | gap 1, opp_overlap 4510237 4510270, overlap 4510232 AACCTTGAAAGTAGA TGCCAAGCCGATGCAA TAAA CTGC-TAGGCTTGGCA TTAATCAATGTGATA Swoo_3703 4510314 - 4510808 + | rare lipoprotein B Swoo_3704 4510869 - 4511909 + | DNA polymerase III, delta subunit Swoo_3705 4511916 - 4512545 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Swoo_3706 4512668 - 4512997 + | iojap-like protein TERM 4613 4513479 - 4513442 - g 74 -9.4 -3.38522 | gap 1, opp_overlap 4513446, overlap 4513440 4513446 4513449 CATGGAGCGTAAATA CTAATCACCCTTACCAC AGAGA GTAGTAAGGG-GATTAA GTTAAGACCAGTCTC Swoo_3707 4512997 - 4513467 + | hypothetical protein TERM 4614 4513473 - 4513449 - f 78 -10.8 -2.8742 | opp_overlap 4513446, overlap 4513446 4513442 4513440 CGTAAATACTAATCA CCCTTACCAC AGAGA GTAGTAAGGG GATTAAGTTAAGACC Swoo_3708 4513587 - 4515419 + | penicillin-binding protein 2 TERM 4615 4515499 - 4515511 + G 70 -5.5 -4.41716 | AATTTTAGCGCTTAT GAGCT TTG GGCTC TTTGTTATCTACTCT Swoo_3709 4515416 - 4516522 + | rod shape-determining protein RodA Swoo_3710 4516666 - 4517679 + | lytic murein transglycosylase B Swoo_3711 4517669 - 4518463 + | rare lipoprotein A Swoo_3712 4518587 - 4519759 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 4616 4519773 - 4519804 + F 100 -14.6 -4.2828 | opp_overlap 4519781, overlap 4519781 AAACTTTACCTTATG TACAAAAAGCCACC TTAA GGTGGCTTTTTGCA TTTTGCTCAATACAC TERM 4617 4519796 - 4519781 - f 93 -10.4 -4.87665 | opp_overlap 4519773 4519781 CCTTATGTACAAAAA GCCACC TTAA GGTGGC TTTTTGCATTTTGCT TERM 4618 4519781 - 4519796 + F 93 -10.4 -4.88222 | opp_overlap 4519781, overlap 4519773 CCTTATGTACAAAAA GCCACC TTAA GGTGGC TTTTTGCATTTTGCT Swoo_3713 4519885 - 4520151 + | hypothetical protein Swoo_3714 4520294 - 4520953 + | lipoate-protein ligase B Swoo_3715 4520946 - 4521911 + | lipoic acid synthetase TERM 4619 4521965 - 4521936 - T 100 -14.5 -3.97308 | gap 1, opp_overlap 4521936 TTCAAATAGATTAAA TGGCGTC-GCTAAT TTA ATTAGCTGACGCCA TTTTTTTACCTCTAA TERM 4620 4521936 - 4521965 + T 100 -14.5 -5.50499 | gap 1, opp_overlap 4521936 TTCAAATAGATTAAA TGGCGTC-GCTAAT TTA ATTAGCTGACGCCA TTTTTTTACCTCTAA Swoo_3716 4522432 - 4521977 - | ribosomal-protein-alanine acetyltransferase Swoo_3717 4522746 - 4522429 - | hypothetical protein TERM 4621 4522933 - 4522969 + r 100 -15.4 -3.53811 | gap 1, opp_overlap 4522942, overlap 4522935 4522936 4522942 AGAGCGAATTTCAGA TGC-GAAAAAGCCGAGC TATT GCTCGGCTTTTTCTGTA TTTGGCAGGGGTAGC TERM 4622 4522935 - 4522967 + r 100 -15.8 -3.34715 | gap 1, opp_overlap 4522942, overlap 4522933 4522936 4522942 AGCGAATTTCAGATG C-GAAAAAGCCGAGC TATT GCTCGGCTTTTTCTG TATTTGGCAGGGGTA TERM 4623 4522936 - 4522965 + r 100 -19.5 -3.24232 | opp_overlap 4522942, overlap 4522935 4522933 4522942 GCGAATTTCAGATGC GAAAAAGCCGAGC TATT GCTCGGCTTTTTC TGTATTTGGCAGGGG TERM 4624 4522942 - 4522959 + r 100 -12.7 -5.14985 | opp_overlap 4522942, overlap 4522936 4522935 4522933 TTCAGATGCGAAAAA GCCGAGC TATT GCTCGGC TTTTTCTGTATTTGG TERM 4625 4522959 - 4522942 - R 100 -12.7 -4.64766 | opp_overlap 4522942 4522936 4522935 4522933 TTCAGATGCGAAAAA GCCGAGC TATT GCTCGGC TTTTTCTGTATTTGG TERM 4626 4523309 - 4523296 - R 73 -6.7 -4.35483 | opp_overlap 4523296 CCCCATCATAAGAAA GCCTA ACTC TAGGC TTTATACCGATTGGT TERM 4627 4523567 - 4523537 - R 72 -9.6 -2.73443 | opp_overlap 4523535, overlap 4523536 CGAGGAGCATATAAT CGCCCTCGGTTCGC GAA GCGAACAGATGGGG TGAGATTATGGCGCT TERM 4628 4524131 - 4524119 - R 72 -9.1 -3.35798 | ACTTTGTAGCGAGAA GCGAC GTA GTCGC TGAACTGGAGGCAAG TERM 4629 4524476 - 4524497 + r 100 -14.5 -4.20981 | opp_overlap 4524476 CTAAAAACGAAAAAA GCCCATTGC GTTA GCAATGGGC TTTATCGTTTATTAG TERM 4630 4524497 - 4524476 - R 100 -14.5 -5.54079 | opp_overlap 4524476 CTAAAAACGAAAAAA GCCCATTGC GTTA GCAATGGGC TTTATCGTTTATTAG TERM 4631 4525852 - 4525863 + r 71 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 4632 4526358 - 4526374 + r 75 -8 -4.08546 | overlap 4526347 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 4633 4527156 - 4527168 + r 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 4634 4527967 - 4527986 + r 71 -9.2 -2.65808 | opp_overlap 4527955 4527958, overlap 4527964 TAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 4635 4529018 - 4529040 + r 72 -9.2 -2.87527 | opp_overlap 4529011 4529023, overlap 4529017 GCGAGTAACGTCACA GCTAACGGTT ATT AACCGTTAAC CTTTCCTCCTCGCTG TERM 4636 4529738 - 4529750 + r 74 -7.7 -3.95584 | overlap 4529733 CTTTGGGCTAGGGAT GCGTA TTC TACGC TTTCCTTGCTCGACG Swoo_3718 4530854 - 4530072 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Swoo_3719 4531052 - 4531498 + | hypothetical protein TERM 4637 4531541 - 4531514 - T 82 -11.4 -3.05384 | opp_overlap 4531519, overlap 4531519 GCCTTCCTCACTTAA CAAAACAGGCTC CTAA GAGCCTGTTCTA ATGTTCAGTGGACTA TERM 4638 4531536 - 4531519 - T 90 -11.3 -4.67982 | opp_overlap 4531519, overlap 4531514 CCTCACTTAACAAAA CAGGCTC CTAA GAGCCTG TTCTAATGTTCAGTG TERM 4639 4531519 - 4531536 + T 83 -11.3 -3.52787 | opp_overlap 4531519 4531514 CCTCACTTAACAAAA CAGGCTC CTAA GAGCCTG TTCTAATGTTCAGTG Swoo_3720 4534162 - 4531589 - | ATP-dependent chaperone ClpB Swoo_3721 4535037 - 4534267 - | hypothetical protein Swoo_3722 4536060 - 4535089 - | RluA family pseudouridine synthase TERM 4640 4535852 - 4535886 + g 77 -5.1 -5.01546 | gap 1, overlap 4535855 GTCTCTTCCTTGAGT GTCGCTTCAATGGCAA TCTC TTGCCCTTCAAGC-AC TTTTTCTCTAGGTTT Swoo_3723 4536138 - 4536944 + | putative lipoprotein TERM 4641 4536977 - 4536992 + T 100 -10.4 -5.79595 | opp_overlap 4536977 CGACTAAGTTTAAAA GCTCCG TTTT CGGAGC TTTTTTGTTTTCGGC TERM 4642 4536992 - 4536977 - T 87 -10.4 -4.20696 | opp_overlap 4536977 CGACTAAGTTTAAAA GCTCCG TTTT CGGAGC TTTTTTGTTTTCGGC TERM 4643 4537169 - 4537153 - T 71 -9.5 -2.62616 | opp_overlap 4537155, overlap 4537155 TCAGTCGGTAGAGCA GAGGATT GAA AATCCTC GTGTCCCTGGTTCGA Swoo_3724 4538869 - 4537289 - | diguanylate cyclase TERM 4644 4538070 - 4538060 - G 74 -3.2 -5.11033 | CACAAGTGTAAAAAA CAAC ACT GCTG ATTCTGGGGTGAAAA TERM 4645 4538465 - 4538476 + g 72 -5.8 -4.57882 | opp_overlap 4538465 4538463 4538461 ATCAGGTAAAACAGA GCCT ATCC AGGC TTTATTATTGTTAGG TERM 4646 4538647 - 4538621 - G 71 -8 -3.76402 | ATTTGACCGACTAAA GGCTTCGTCCCT CAC AGCAACAAAGCC AACCATCTCATCCCA TERM 4647 4538706 - 4538694 - G 71 -7.7 -3.73414 | opp_overlap 4538693, overlap 4538679 CACAGCACATCTAAA TTGCG CTG CGCAA ACTTAATTCCCATCT Swoo_3725 4540782 - 4538920 - | methyl-accepting chemotaxis sensory transducer TERM 4648 4539951 - 4539935 - G 73 -5.1 -4.62102 | ACAAAAATAGTAAAA GCAATCA AAA TGATAGC GATAACACAGAAAAG TERM 4649 4540825 - 4540807 - H 81 -11.8 -2.84586 | opp_overlap 4540809, overlap 4540804 4540809 CCTAAAATCCAAGCA CACCAACT AAA AGTTGGTG ATGTAAAACAAATAA Swoo_3726 4541054 - 4542010 + | ornithine cyclodeaminase TERM 4650 4542030 - 4542047 + F 76 -9.9 -3.10343 | opp_overlap 4542030 ATAGTTTTTATATAA TGAGGGA GTAC TCCCTCA TTCCCTAATAGCTCT TERM 4651 4542047 - 4542030 - f 79 -9.9 -3.49102 | opp_overlap 4542030 ATAGTTTTTATATAA TGAGGGA GTAC TCCCTCA TTCCCTAATAGCTCT Swoo_3727 4542189 - 4542725 + | ECF subfamily RNA polymerase sigma-24 factor TERM 4652 4542805 - 4542793 - g 72 -3.3 -5.00616 | overlap 4542777 4542794 TCTCTCGCCAAAAAA CGACC TTT GGCCA GAGATAGAGAAGCGG Swoo_3728 4542725 - 4543240 + | hypothetical protein TERM 4653 4543304 - 4543289 - g 70 -9 -3.14344 | overlap 4543293 CACTTGTTTTAGTAA GCCAGT TTGC ACTGGC AAGCGAATCTATCGA TERM 4654 4543795 - 4543818 + G 81 -12.4 -2.56715 | opp_overlap 4543791, overlap 4543791 GTTAGCTACAAGCTT GTCAGCGGAG AGCT CACCGCTGAC TCCCTTGCTAAAGAT Swoo_3729 4543237 - 4544184 + | hypothetical protein TERM 4655 4544220 - 4544199 - T 73 -10.1 -2.50665 | opp_overlap 4544202 4544211, overlap 4544198 4544197 4544201 AACATAAGATAAAGT GATGCCCTC TTTT GAGGGCTTC TTCAGTATTCATTAA TERM 4656 4544202 - 4544217 + T 83 -10.4 -3.73872 | opp_overlap 4544201 4544199 4544198 4544197, overlap 4544211 ATAAGATAAAGTGAT GCCCTC TTTT GAGGGC TTCTTCAGTATTCAT Swoo_3730 4544924 - 4544232 - | pseudouridine synthase TERM 4657 4545413 - 4545397 - H 77 -9.5 -3.52093 | AGATTTCAAGCACAA CATGAGT GAA ACTCATG TAGGAATGAATAGAG TERM 4658 4545724 - 4545710 - g 72 -8.6 -3.6288 | AAATGAAGGGGGAAA CCAACT TGG AGTTGG TATCGAATGTCATAG Swoo_3732 4545435 - 4546340 + | LysR family transcriptional regulator Swoo_3733 4547167 - 4546439 - | putative signal transduction protein TERM 4659 4547251 - 4547235 - R 73 -4.3 -4.88067 | opp_overlap 4547235 ATTTACCCATAAAAA GCCTGTC AGG GTCAAGC TCATTTCACGTAAAT Swoo_3734 4548049 - 4547426 - | GDSL family lipase TERM 4660 4548091 - 4548109 + r 79 -8.9 -4.12279 | opp_overlap 4548091 TTAATAACGTAAAAA GCCAGAT ACAGG ATCTGGC TTTAGTTTCAATTTC TERM 4661 4548109 - 4548091 - R 88 -8.9 -4.8143 | opp_overlap 4548091 TTAATAACGTAAAAA GCCAGAT ACAGG ATCTGGC TTTAGTTTCAATTTC Swoo_3735 4550030 - 4548144 - | TonB-dependent receptor plug TERM 4662 4549558 - 4549523 - G 73 -4.7 -4.77438 | gap 1 ACTGACGAGTAAAAA TTTGGATCA-CGCCGC CAATC GCGTCGCTGCCCCAAA CTGATGCACGAGGTC Swoo_3736 4551321 - 4550641 - | hypothetical protein TERM 4663 4551471 - 4551429 - H 81 -6.5 -4.89521 | gap 1, opp_overlap 4551433 4551443, overlap 4551431 ATATGTTAAATAAAA CACTTGACCATTATGATTAC CAAT GTAATCTTAATAGTCATG-G ATTACGCTTGTAATT TERM 4664 4551470 - 4551431 - H 85 -10.2 -4.06281 | opp_overlap 4551433 4551443, overlap 4551429 ATGTTAAATAAAACA CTTGACCATTATGATTAC CAAT GTAATCTTAATAGTCATG GATTACGCTTGTAAT TERM 4665 4551433 - 4551468 + H 71 -9.2 -2.55551 | opp_overlap 4551431 4551429, overlap 4551443 GTTAAATAAAACACT TGACCATTATGATTAC CAAT GTAATCTTAATAGTCA TGGATTACGCTTGTA Swoo_3737 4551522 - 4551893 + | CopY family transcriptional regulator Swoo_3738 4551896 - 4553110 + | TonB family protein TERM 4666 4553246 - 4553231 - T 100 -8.2 -5.19328 | opp_overlap 4553231 ATTGGACAATAAAAA GGAGGC CTAA GCCCCC TCTTAACGTATCACA Swoo_3739 4553614 - 4553267 - | hypothetical protein Swoo_3740 4553996 - 4554484 + | azurin Swoo_3741 4555897 - 4554563 - | amidohydrolase Swoo_3742 4557366 - 4556074 - | sigma-54 dependent trancsriptional regulator TERM 4667 4556784 - 4556772 - G 86 -7.7 -4.77036 | opp_overlap 4556772 TTTCATGACCAAAAA GCTCA TCT TGAGC TAATGTCGCTTGTAT TERM 4668 4558987 - 4558973 - g 77 -11.4 -2.52234 | opp_overlap 4558964 4558973, overlap 4558972 ATAAATGCCAGGAAG CCGCTG AAA CAGCGG TTATTGACTTTGGTG TERM 4669 4558973 - 4558987 + G 91 -11.4 -3.78904 | opp_overlap 4558973 4558972, overlap 4558964 ATAAATGCCAGGAAG CCGCTG AAA CAGCGG TTATTGACTTTGGTG Swoo_3743 4557577 - 4559292 + | short-chain dehydrogenase/reductase SDR Swoo_3744 4559358 - 4559627 + | hypothetical protein TERM 4670 4559734 - 4559701 - f 76 -8.9 -3.81447 | overlap 4559702 TAGATGTGAGAACAA TGCTTTCTCCGCC CCTAAAAT AGCGGAGAAAGCC CATACAAAGCAGCAT TERM 4671 4559733 - 4559702 - f 86 -12.4 -2.88386 | overlap 4559701 AGATGTGAGAACAAT GCTTTCTCCGCC CCTAAAAT AGCGGAGAAAGC CCATACAAAGCAGCA TERM 4672 4560111 - 4560098 - g 76 -8.1 -4.21194 | opp_overlap 4560109, overlap 4560109 GCTCAGCAGGTAAAA GCGCT AAAA AGCGC CATCTCAGATATTGA Swoo_3745 4559762 - 4561339 + | carbohydrate kinase FGGY Swoo_3746 4561401 - 4561775 + | cupin 2 domain-containing protein Swoo_3747 4562392 - 4561772 - | two component LuxR family transcriptional regulator Swoo_3748 4563259 - 4562396 - | histidine kinase Swoo_3749 4563777 - 4563253 - | cache type 2 domain-containing protein TERM 4673 4563618 - 4563628 + g 72 -6.8 -4.20516 | GCTCGATATTTGATT GCAG CTG CTGC TTTCTTAACTCAAGG Swoo_3750 4564144 - 4565211 + | TRAP dicarboxylate transporter- DctP subunit TERM 4674 4565220 - 4565241 + F 74 -10.2 -2.83522 | opp_overlap 4565220, overlap 4565219 CCAGTAACGACTGAA GGGCTTGA TGCGTT TCAAGCCC ATTTACTAAAGAGCT TERM 4675 4565241 - 4565220 - f 76 -10.2 -3.14136 | opp_overlap 4565219 4565220 CCAGTAACGACTGAA GGGCTTGA TGCGTT TCAAGCCC ATTTACTAAAGAGCT Swoo_3751 4565317 - 4565829 + | tripartite ATP-independent periplasmic transporter DctQ Swoo_3752 4565829 - 4567124 + | TRAP dicarboxylate transporter, DctM subunit Swoo_3753 4567159 - 4568193 + | hypothetical protein TERM 4676 4568277 - 4568299 + T 100 -9.2 -5.47399 | TGAAACTTCATGTTA CCGCTTAG TTAACGC CTAAGCGG TTTTTTTCAACTTGA Swoo_3754 4568846 - 4568325 - | NADPH-dependent FMN reductase Swoo_3755 4568930 - 4569889 + | LysR family transcriptional regulator Swoo_3756 4571460 - 4569946 - | alpha/beta hydrolase fold Swoo_3757 4571729 - 4573897 + | extracellular solute-binding protein TERM 4677 4574075 - 4574046 - T 75 -6.5 -4.44915 | gap 1, overlap 4574047 CAAGGATGTAGAAAA TGCCGATAAATGCC AGG AGCATTTA-CGGCC AGACACAAAAAAACG TERM 4678 4574074 - 4574047 - T 78 -10 -3.26226 | gap 1, overlap 4574046 AAGGATGTAGAAAAT GCCGATAAATGCC AGG AGCATTTA-CGGC CAGACACAAAAAAAC TERM 4679 4574088 - 4574105 + T 78 -5.5 -5.03314 | opp_overlap 4574089, overlap 4574089 GCCAGACACAAAAAA ACGAGCT ATTA AGCTCGC TTTTTTGGCACTAGC TERM 4680 4574089 - 4574104 + T 74 -9 -3.61506 | opp_overlap 4574089, overlap 4574088 CCAGACACAAAAAAA CGAGCT ATTA AGCTCG CTTTTTTGGCACTAG TERM 4681 4574104 - 4574089 - T 100 -9 -5.76633 | opp_overlap 4574089 4574088 CCAGACACAAAAAAA CGAGCT ATTA AGCTCG CTTTTTTGGCACTAG Swoo_3758 4574359 - 4574129 - | hypothetical protein Swoo_3759 4575384 - 4574602 - | hypothetical protein Swoo_3760 4575987 - 4575451 - | deaminase-reductase domain-containing protein Swoo_3761 4576183 - 4577217 + | dihydroorotase, homodimeric type TERM 4682 4577313 - 4577346 + T 95 -11.9 -3.93061 | opp_overlap 4577314 4577322, overlap 4577314 4577322 CATTAGCCATGATGA ATTAAAAAAGCCTGC AACT GCAGGCTTTTTTGAC TTTAACTTTTACAGT TERM 4683 4577314 - 4577345 + T 100 -15.4 -2.95113 | opp_overlap 4577314 4577322, overlap 4577313 4577322 ATTAGCCATGATGAA TTAAAAAAGCCTGC AACT GCAGGCTTTTTTGA CTTTAACTTTTACAG TERM 4684 4577345 - 4577314 - T 100 -13.2 -3.22476 | opp_overlap 4577314 4577313 4577322, overlap 4577322 ATTAGCCATGATGAA TTAAAAAAGCCTGC AACT GCAGGCTTTTTTGA CTTTAACTTTTACAG TERM 4685 4577337 - 4577322 - T 100 -10.4 -5.30155 | opp_overlap 4577314 4577313 4577322, overlap 4577314 TGATGAATTAAAAAA GCCTGC AACT GCAGGC TTTTTTGACTTTAAC TERM 4686 4577322 - 4577337 + T 100 -10.4 -5.22039 | opp_overlap 4577322 4577314, overlap 4577314 4577313 TGATGAATTAAAAAA GCCTGC AACT GCAGGC TTTTTTGACTTTAAC TERM 4687 4577412 - 4577390 - T 100 -9.2 -5.80003 | opp_overlap 4577390, overlap 4577383 CTAATAAACAAAAAA CCAGTAGC TTTTTGG GCTACTGG TTTTAAAAGTGTCAA TERM 4688 4577390 - 4577412 + T 85 -10.6 -4.13014 | opp_overlap 4577383 4577390 CTAATAAACAAAAAA CCAGTAGCTT TTT GGGCTACTGG TTTTAAAAGTGTCAA Swoo_3762 4578185 - 4577466 - | two component transcriptional regulator Swoo_3763 4578757 - 4579194 + | hypothetical protein Swoo_3764 4579663 - 4581015 + | aspartate kinase Swoo_3765 4581102 - 4582208 + | succinylglutamate desuccinylase/aspartoacylase Swoo_3766 4582303 - 4582812 + | hypothetical protein TERM 4689 4582846 - 4582881 + T 100 -16.4 -3.77087 | opp_overlap 4582851, overlap 4582851 4582880 ATAAATTTTGACATA AAAAAGAGCCATAACC TATA GGTTATGGCTCTTTTA TTTAAGTCTTAAATA TERM 4690 4582876 - 4582851 - T 100 -16.3 -5.36441 | opp_overlap 4582846 4582851 TTTTGACATAAAAAA GAGCCATAACC TATA GGTTATGGCTC TTTTATTTAAGTCTT TERM 4691 4582851 - 4582876 + T 100 -16.3 -4.93288 | opp_overlap 4582851, overlap 4582846 TTTTGACATAAAAAA GAGCCATAACC TATA GGTTATGGCTC TTTTATTTAAGTCTT Swoo_3767 4586832 - 4582897 - | protease domain-containing protein TERM 4692 4583394 - 4583384 - G 74 -6.8 -4.43309 | CAACCTGAAGCAAAA CCAG ACA CTGG ATCAGGTACTACTGC TERM 4693 4587224 - 4587251 + r 78 -10 -3.24613 | opp_overlap 4587229, overlap 4587229 CAAAGAATATGAATG AAAAAGGCTAAC ATTC GTTAGCCTTTTA TTAGATTACTTCATA TERM 4694 4587229 - 4587246 + r 91 -9.9 -4.72631 | opp_overlap 4587229, overlap 4587224 AATATGAATGAAAAA GGCTAAC ATTC GTTAGCC TTTTATTAGATTACT TERM 4695 4587246 - 4587229 - R 93 -9.9 -4.92777 | opp_overlap 4587229 4587224 AATATGAATGAAAAA GGCTAAC ATTC GTTAGCC TTTTATTAGATTACT Swoo_3768 4591067 - 4587270 - | protease domain-containing protein TERM 4696 4588621 - 4588604 - G 72 -9.9 -3.20164 | opp_overlap 4588610 CTACAGGTAACTTAA CTTCTGG CATG CCAGAAG CTGCAAGCTTAATGT TERM 4697 4591193 - 4591171 - R 70 -4.9 -4.5852 | overlap 4591160 TAAGCTAAAGGAAAA TCCTTAGTA GAACA CACCAAGGA ACCAACGTTTTTAGC TERM 4698 4591580 - 4591547 - R 100 -15.5 -3.04799 | opp_overlap 4591552, overlap 4591552 TACAACTCTTGAAGA GGTAACTCCAAGCAC TCTG ATACTTGGAGTTACC TATAAACTAAGAGGA Swoo_3769 4593929 - 4591623 - | peptidase S9B dipeptidylpeptidase IV subunit TERM 4699 4592279 - 4592295 + g 74 -2.1 -5.28414 | overlap 4592282 GGCCACCGTAAACTC GCACCAC AAC GGGGTAC TTTTTATCTTTGTTA TERM 4700 4592659 - 4592615 - G 72 -7.2 -4.01888 | gap 1 ATGGCACACGATAAA GGTGCTGTTCTACCG-CCGTA TCTT TACGGCCGGTAAAATAGATCC AGCCCGACTTCTCAT TERM 4701 4593747 - 4593764 + g 93 -11.3 -4.21974 | opp_overlap 4593738 AGGAGAGGCGTACAT CCGCTCT ATTG AGAGCGG TTTATTCCCTGCTGC TERM 4702 4594106 - 4594088 - H 79 -2.4 -5.54907 | overlap 4594089 GTGATAAAATAAAAA CTAGTCCT AAT AGCACTAA AATCAAGATCATCGA Swoo_3770 4594210 - 4595199 + | inositol phosphatase/fructose-16-bisphosphatase TERM 4703 4595266 - 4595240 - T 100 -15.3 -4.16842 | opp_overlap 4595240 CTTATTTTTAAGAAA GCGCAATCCTA GTCAT TAGGATTGCGC TTTTTGTTTCTTTTT TERM 4704 4595240 - 4595266 + T 100 -16 -5.63012 | opp_overlap 4595240 CTTATTTTTAAGAAA GCGCAATCCTAG TCA TTAGGATTGCGC TTTTTGTTTCTTTTT Swoo_3771 4596239 - 4595826 - | hypothetical protein Swoo_3772 4597228 - 4596359 - | hypothetical protein TERM 4705 4596846 - 4596866 + g 74 -5.5 -4.67904 | AGCTTCTTCAGCTCA TGGAAAGGT ATC ATCTTTTCA TTTTTCCACTTCGTG Swoo_3773 4598461 - 4597484 - | hypothetical protein TERM 4706 4598637 - 4598651 + H 78 -10 -3.33214 | overlap 4598635 TGCATCGAGCTTTAA TCAGGC TAC GCCTGA TCTTATAGTTAGACT TERM 4707 4599321 - 4599292 - g 89 -9.4 -4.49531 | opp_overlap 4599295, overlap 4599293 AACAAAATGAATAAA TTGCTGGCTAAA AACCAG TTTAGCCAGCAG AAAAGAATAGAGCTT TERM 4708 4599320 - 4599293 - g 91 -12.9 -3.27279 | opp_overlap 4599295, overlap 4599292 ACAAAATGAATAAAT TGCTGGCTAAA AACCAG TTTAGCCAGCA GAAAAGAATAGAGCT TERM 4709 4599473 - 4599462 - g 71 -4.4 -4.59982 | TCATAAGCAAACAAA TCGT AACA ACGA AATAAATGTCATTGC Swoo_3774 4598911 - 4599987 + | hypothetical protein TERM 4710 4600215 - 4600205 - T 71 -8.2 -3.54459 | opp_overlap 4600213 4600214 GGAAGCTGCCGTAAA GCCC ACA GGGC AGAAAATGTTCCAGA TERM 4711 4600397 - 4600381 - T 78 -9.5 -3.55368 | AGGCAATTGAGATAA TGAAGGT ACG ACCTTCA ATAACTCAGCCCAAT TERM 4712 4600821 - 4600800 - T 79 -8.7 -4.13903 | opp_overlap 4600800 4600801, overlap 4600801 4600816 CACACAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 4713 4600800 - 4600821 + T 79 -8.7 -4.1891 | opp_overlap 4600800 4600801 4600816, overlap 4600801 CACACAAGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 4714 4600820 - 4600801 - T 87 -12.2 -3.07257 | opp_overlap 4600800 4600801, overlap 4600800 4600816 ACACAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 4715 4600801 - 4600820 + T 87 -12.2 -3.11024 | opp_overlap 4600801 4600800 4600816, overlap 4600800 ACACAAGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 4716 4600830 - 4600848 + T 80 -10.2 -3.60214 | opp_overlap 4600816, overlap 4600831 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTATCTACTTCAAAT TERM 4717 4600831 - 4600847 + T 93 -13.7 -2.75647 | opp_overlap 4600816, overlap 4600830 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTATCTACTTCAAA Swoo_3775 4601287 - 4600853 - | transposase IS200-family protein TERM 4718 4601390 - 4601371 - R 90 -12.2 -3.44319 | opp_overlap 4601371 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 4719 4601371 - 4601390 + r 90 -12.2 -3.57144 | opp_overlap 4601371 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAC TERM 4720 4601433 - 4601412 - R 100 -13.1 -5.79595 | opp_overlap 4601412 GCTGAAAACAAAAAA GCCTTCATC CGAA GATGAAGGC TTTCAATTTAAAGGT TERM 4721 4601412 - 4601433 + r 100 -13.1 -3.84719 | opp_overlap 4601412 GCTGAAAACAAAAAA GCCTTCATC CGAA GATGAAGGC TTTCAATTTAAAGGT Swoo_3776 4603307 - 4601517 - | flavocytochrome c TERM 4722 4603058 - 4603079 + g 72 -8.1 -3.95449 | opp_overlap 4603058 4603057 4603060 CAGGGAAGTGAGAAT CATGAGCAT TGTA ATGTTCATG TTTGGTCTCTTGTGC TERM 4723 4603568 - 4603537 - H 84 -11 -3.7108 | AGGTGCATAGTTAAA TTGGAGAGTATGCA TTTT TGCATACCCTCTAA AGAGGTAGATCACAA TERM 4724 4604506 - 4604485 - g 71 -3.7 -4.84761 | ACAGGCCGAGAAAAA GTTGATCTG ACGA CAACTCAAC AGAAGATGTTATGGC Swoo_3777 4603699 - 4605804 + | integral membrane sensor signal transduction histidine kinase Swoo_3778 4605801 - 4607183 + | two component, sigma54 specific, Fis family transcriptional regulator Swoo_3779 4609249 - 4607198 - | integral membrane sensor signal transduction histidine kinase Swoo_3780 4610460 - 4609246 - | putative aliphatic amidase expression-regulating protein TERM 4725 4610091 - 4610080 - G 71 -4.4 -4.61566 | overlap 4610087 TTGCAAAGGATAAAA CATC AAGT GATG ATGCTCCTCAATCAC TERM 4726 4610635 - 4610613 - R 100 -14.2 -5.49234 | ATAGGCAATAAAAAA GCCCGTAGAA GAG CTCTACGGGC TAATACTAATCAATA Swoo_3781 4611930 - 4610665 - | sodium:dicarboxylate symporter TERM 4727 4611341 - 4611330 - G 78 -5.8 -4.90906 | GCATAAGAGCAAAAA CACC GAAA GGTG CCAGCTGCATCACTA TERM 4728 4612393 - 4612369 - R 90 -6.4 -5.60993 | opp_overlap 4612369 TTGGCGATAAAAAAA CCGATACAGG GATCA CCAATATCGG TTTTAAACAAACTGC Swoo_3782 4613678 - 4612458 - | hypothetical protein Swoo_3783 4614333 - 4613680 - | hypothetical protein Swoo_3784 4618007 - 4614333 - | hypothetical protein TERM 4729 4618319 - 4618274 - R 76 -10.2 -3.06133 | gap 1, opp_overlap 4618272 4618280, overlap 4618276 4618280 TAACTCTCGAGTTAA TACCAATCAGTATAA-AGATT TGATC AATGTCTTATACTGATTGGTA CATCATTTAACTCGG Swoo_3785 4619699 - 4618326 - | amino acid carrier protein TERM 4730 4619194 - 4619176 - G 73 -6 -4.34402 | GCGGGCACATGAAAA GCGATG GTTAACG CATCGC TGATCGCATTAACTT TERM 4731 4619249 - 4619235 - G 76 -4.2 -5.0538 | GCCTATCCCAAAAAA GGCG ACCCCAA CGCC AAAAATAGCAAACAG TERM 4732 4620252 - 4620265 + r 75 -2.3 -5.40072 | ACTTTTGGTTTAAGG GAGCA CGGA TGCAC TTTTTTTAAACAAAA Swoo_3786 4621099 - 4620398 - | hypothetical protein TERM 4733 4620984 - 4620974 - G 82 -8.2 -4.52589 | GCCGGGTACACAAAA GCGC TTT GCGC CCACGTCATGAATTG Swoo_3787 4621326 - 4623581 + | TonB-dependent receptor TERM 4734 4623646 - 4623664 + F 100 -13.2 -4.98531 | opp_overlap 4623646 TTATTCCCTTAAAAA GGTGAGCA TTA TGCTCACC TTTTTCATTTCAAAA TERM 4735 4623664 - 4623646 - f 100 -13.2 -4.57569 | opp_overlap 4623646 TTATTCCCTTAAAAA GGTGAGCA TTA TGCTCACC TTTTTCATTTCAAAA Swoo_3788 4623869 - 4625056 + | phosphate-selective porin O and P TERM 4736 4625072 - 4625097 + F 95 -12.7 -3.42124 | opp_overlap 4625069 4625066, overlap 4625072 4625076 TCTGCTAAACGAGTT CCTAGGACCTA GGTT TAGGTTCTAGG TTCTAGGTCCTTTTC TERM 4737 4625072 - 4625084 + F 72 -7.7 -3.81741 | opp_overlap 4625069 4625066, overlap 4625072 4625076 TCTGCTAAACGAGTT CCTAG GAC CTAGG TTTAGGTTCTAGGTT TERM 4738 4625076 - 4625107 + F 73 -7.4 -4.08216 | gap 1, opp_overlap 4625069 4625066, overlap 4625072 4625072 CTAAACGAGTTCCTA GGACCTAG-GTTTAG GTT CTAGGTTCTAGGTCC TTTTCCCCAAACTCA Swoo_3789 4625165 - 4625692 + | FMN-binding domain-containing protein TERM 4739 4626431 - 4626460 + G 95 -12.2 -4.29738 | opp_overlap 4626419 TAGTCTCGCTTCAAG CCCGCTCCCA TCACCTCACT TGGGAGCGGG TTTTACTCGATATCC Swoo_3790 4625809 - 4626606 + | PepSY-associated TM helix domain-containing protein TERM 4740 4626933 - 4626954 + G 84 -8.7 -4.34402 | overlap 4626928 4626934 TTGTTCCTGTGGGGC TTCTGGCCG CTCT TGGCCAGAG TTTTGGTATGAGCGC TERM 4741 4626934 - 4626953 + G 74 -10 -3.2032 | overlap 4626928 4626933 TGTTCCTGTGGGGCT TCTGGCCG CTCT TGGCCAGA GTTTTGGTATGAGCG TERM 4742 4627692 - 4627705 + G 70 -6.7 -4.15044 | CTTTAGGTAGCTGCA TGGCA ATCT TGCCA TTTATTGCAAACCAG Swoo_3791 4626842 - 4628011 + | major facilitator transporter TERM 4743 4628115 - 4628094 - T 100 -13.1 -4.34402 | GTCCTGAGACGAAAA GGGCTTGTT ATCC AACAAGCCC TCCTAATACCAATCG Swoo_3792 4630511 - 4628139 - | penicillin-binding protein 1B Swoo_3793 4633204 - 4630676 - | ATP-dependent helicase HrpB TERM 4744 4633742 - 4633726 - g 73 -5.1 -4.59984 | AAAAGCTACACAAAA CTCCCTG CCA CAAGAAG TTAATTTTGTTCCCC Swoo_3794 4633340 - 4633939 + | phosphoesterase HXTX TERM 4745 4633946 - 4633927 - T 100 -9.3 -5.85178 | AACAGGCAAAAAAAA TGCTGCC GATTAG GGCAGCA AATTGAAGAATTTCT Swoo_3795 4635129 - 4634152 - | transcriptional regulator, CadC TERM 4746 4634673 - 4634663 - G 95 -3.2 -5.66229 | ATCAACAATAAAAAA CCGA CTA TCAG ATTGCCTTTTTGAGC TERM 4747 4635575 - 4635546 - R 85 -10.1 -4.12532 | gap 1, opp_overlap 4635551 4635553, overlap 4635553 TTGGGTATATATAAA TGAAGAAGCGAGCC TAA GGCTCGCT-CTTTA TGACAGGTAAACCAA TERM 4748 4635551 - 4635571 + r 84 -11.1 -3.86897 | opp_overlap 4635546 4635553, overlap 4635553 TATATATAAATGAAG AAGCGAGCC TAA GGCTCGCTC TTTATGACAGGTAAA TERM 4749 4635569 - 4635553 - R 100 -13.7 -3.95007 | opp_overlap 4635551 4635553, overlap 4635546 TATATAAATGAAGAA GCGAGCC TAA GGCTCGC TCTTTATGACAGGTA TERM 4750 4635553 - 4635569 + r 100 -13.7 -3.5241 | opp_overlap 4635553 4635546, overlap 4635551 TATATAAATGAAGAA GCGAGCC TAA GGCTCGC TCTTTATGACAGGTA Swoo_3796 4636886 - 4635609 - | PepB aminopeptidase TERM 4751 4636998 - 4636975 - H 95 -14 -3.02144 | CTAGGTGGCCGAAGA GTCCTGCTAT TTAC ATAGCAGGAC ACCAAGTAAAAGAGG TERM 4752 4637595 - 4637578 - g 74 -4.1 -4.91511 | ACTCGAGGACAAAAA CATCTAC GAGA GTTGATG GAGATGGTCTCTATG Swoo_3797 4637086 - 4637805 + | sugar fermentation stimulation protein TERM 4753 4638276 - 4638257 - g 71 -2.1 -5.17054 | overlap 4638259 AGAAGATCGAAAAAA CACTTCA GAAAAT TGAAGAG GATGATTTCGGCTTC Swoo_3798 4637965 - 4638408 + | TraR/DksA family transcriptional regulator TERM 4754 4638456 - 4638437 - f 95 -13.6 -3.12999 | opp_overlap 4638437 TGATGCTACAGGTAA GCGGAGCT ATCC AGCTCCGC TTTACTGACTCTGAC TERM 4755 4638437 - 4638456 + F 100 -13.6 -3.78022 | opp_overlap 4638437 TGATGCTACAGGTAA GCGGAGCT ATCC AGCTCCGC TTTACTGACTCTGAC Swoo_3799 4638605 - 4639504 + | glutamyl-tRNA synthetase class Ic TERM 4756 4639737 - 4639724 - f 79 -8.1 -4.13077 | opp_overlap 4639720 4639724 AAGAGACCACACAAA CAGGC CTAA GCCTG TCGGTTGTCCCGAGA Swoo_3800 4639780 - 4641045 + | poly(A) polymerase TERM 4757 4641099 - 4641128 + G 73 -10.2 -3.07994 | gap 1, opp_overlap 4641106, overlap 4641102 GATCCTGTCGCTCAG CT-AGATAGTGCC TCTAT GGCACTATCTGAG TTAGCTGAAGTTAAC TERM 4758 4641102 - 4641124 + G 79 -12.1 -2.55015 | opp_overlap 4641106, overlap 4641099 CCTGTCGCTCAGCTA GATAGTGCC TCTAT GGCACTATC TGAGTTAGCTGAAGT Swoo_3801 4641045 - 4641545 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Swoo_3802 4641693 - 4642487 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 4759 4642647 - 4642661 + G 70 -7.1 -3.94409 | opp_overlap 4642647 ACTTGGCGTACAAAA GGCGA AACCA TCGCC TTTGTCCCTACTATG TERM 4760 4642661 - 4642647 - g 77 -7.1 -4.37092 | opp_overlap 4642647 ACTTGGCGTACAAAA GGCGA AACCA TCGCC TTTGTCCCTACTATG Swoo_3803 4642587 - 4643432 + | pantoate--beta-alanine ligase TERM 4761 4643474 - 4643459 - f 70 -8.2 -3.24423 | opp_overlap 4643452 4643459, overlap 4643452 4643449 CCCAATAACAGTTAA GGGGCA TTAA CGCCCC TCTCCTGTTACTCTC Swoo_3804 4643698 - 4644216 + | hypothetical protein TERM 4762 4644241 - 4644205 - T 73 -4.6 -4.90302 | gap 1, opp_overlap 4644208, overlap 4644208 GAGCAAGAAAACAAA GAAGCGCAA-TAATACC AAGC AGTATTAATTACGCTAC TCTTCACTTTAACTA Swoo_3805 4644462 - 4644271 - | hypothetical protein Swoo_3806 4644832 - 4646634 + | TPR repeat-containing protein TERM 4763 4646660 - 4646628 - T 100 -22.3 -2.8937 | opp_overlap 4646635, overlap 4646635 AGATAGTTGTACAGA GCATTAACAGGTAGC CAT GCTACCTGTTAATGC CGTACAGAGTATCGA TERM 4764 4646635 - 4646653 + T 95 -13.2 -3.16564 | opp_overlap 4646628 4646635 TGTACAGAGCATTAA CAGGTAGC CAT GCTACCTG TTAATGCCGTACAGA TERM 4765 4646653 - 4646635 - T 100 -13.2 -3.26545 | opp_overlap 4646635, overlap 4646628 TGTACAGAGCATTAA CAGGTAGC CAT GCTACCTG TTAATGCCGTACAGA Swoo_3807 4648864 - 4646684 - | ABC transporter related Swoo_3808 4650124 - 4648865 - | secretion protein HlyD family protein TERM 4766 4650189 - 4650171 - R 75 -10.2 -2.94595 | overlap 4650158 AAGCCGCATCAGAGA GCTCGGCG CTG CGGCGAGC CAACTCCAGCTGTAA Swoo_3809 4650717 - 4650154 - | hypothetical protein Swoo_3810 4650915 - 4650748 - | hypothetical protein TERM 4767 4650800 - 4650788 - G 82 -4.8 -5.18726 | TCGGGATAACAAAAA CCTG GTAAA CAGG GTTCAGAGCAAAAAG Swoo_3811 4651520 - 4650957 - | hypothetical protein Swoo_3812 4651717 - 4651589 - | hypothetical protein Swoo_3813 4651906 - 4651778 - | hypothetical protein Swoo_3814 4652099 - 4651971 - | hypothetical protein Swoo_3815 4652493 - 4652846 + | hypothetical protein TERM 4768 4652897 - 4652851 - T 72 -7.5 -3.76141 | gap 2, overlap 4652849 ATGAGCATTAAAACA TCGCAAGTG-CGAGTTAC-ACTT CTT AAGCAGAAACTCGACACTCGCAA CTTTCCTCCTTTAAC Swoo_3816 4653684 - 4652908 - | ABC-2 type transporter TERM 4769 4653445 - 4653433 - G 77 -3.3 -5.1861 | CTTAGCACTAAAAAA TGAGG AGG CCACA TTAGAGTAAGATGCT Swoo_3817 4654661 - 4653681 - | ABC transporter related TERM 4770 4654726 - 4654742 + r 72 -5 -4.75372 | opp_overlap 4654727, overlap 4654727 TTCGAATAAAAAAAA ACCCGC ATAAA GCGGGA TTTTTAATAAATAAT TERM 4771 4654727 - 4654741 + r 71 -8.5 -3.445 | opp_overlap 4654727, overlap 4654726 TCGAATAAAAAAAAA CCCGC ATAAA GCGGG ATTTTTAATAAATAA TERM 4772 4654741 - 4654727 - R 100 -8.5 -6.36459 | opp_overlap 4654726 4654727 TCGAATAAAAAAAAA CCCGC ATAAA GCGGG ATTTTTAATAAATAA Swoo_3818 4655295 - 4654765 - | hypoxanthine phosphoribosyltransferase Swoo_3819 4655985 - 4655326 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 4773 4655949 - 4655966 + g 74 -3.5 -5.11063 | gap 1 AAGCACCAGTCCATG CCAAA-CT AAT AGATTTGG TTTTTCTTGGGTAGT Swoo_3820 4657524 - 4656139 - | UDP-N-acetylmuramate TERM 4774 4656637 - 4656649 + g 76 -7.7 -4.16251 | GCGTGCAGCGGCTAC TGCCA TAG TGGCA TTTTCAACATTGTGT Swoo_3821 4658692 - 4658171 - | hypothetical protein Swoo_3822 4659387 - 4658896 - | putative V10 pilin Swoo_3823 4660557 - 4659493 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 4775 4662001 - 4661989 - g 76 -7.7 -4.2828 | overlap 4661997 4661998 TTGGAGCGACTAAAA GCTGA AAA TCAGC AACTGAGCTGGAACA Swoo_3824 4660786 - 4662765 + | diguanylate cyclase Swoo_3825 4664816 - 4662774 - | sodium/hydrogen exchanger Swoo_3826 4664999 - 4665769 + | hypothetical protein TERM 4776 4665817 - 4665840 + T 100 -8.8 -5.27923 | opp_overlap 4665817 4665819 TGACGGTTTTAATTA GACCAGTTGC TCTT GCTGCTGGTC TTTTTTATGCACTTG Swoo_3827 4667048 - 4665814 - | hypothetical protein TERM 4777 4666774 - 4666798 + g 71 -2.1 -5.0538 | overlap 4666778 CGTAAATGTTCATCC TCAAGCTCTTT TTC AAGGCGCTTTA TTTTTTGAGCTGGCG TERM 4778 4666778 - 4666794 + g 73 -2.9 -5.05153 | overlap 4666774 AATGTTCATCCTCAA GCTCTTT TTC AAGGCGC TTTATTTTTTGAGCT TERM 4779 4667083 - 4667055 - R 86 -9.8 -4.30987 | gap 1, opp_overlap 4667063 AGTTGTCATAATAAA GTCCT-AAATGTG TAAA CACATTTCAGGAC AAGACACTATCCAAT TERM 4780 4667128 - 4667104 - R 100 -15.1 -5.11063 | opp_overlap 4667104 ACTATCCAATAAAAA GCCCTTGGTAA TCA CTACCAAGGGC TTTTTCGAAAGTCAC TERM 4781 4667104 - 4667128 + r 100 -14.4 -4.58395 | opp_overlap 4667104 ACTATCCAATAAAAA GCCCTTGGTA ATCAC TACCAAGGGC TTTTTCGAAAGTCAC Swoo_3828 4668654 - 4667206 - | disulphide bond formation protein DsbB TERM 4782 4671514 - 4671493 - g 76 -3 -5.29445 | opp_overlap 4671497 TGTGAACAACAAAAA CAGACTCT GGAAGA AGAGTTTG CCTTTATTGCCGAAT Swoo_3829 4669438 - 4672260 + | metal dependent phosphohydrolase Swoo_3830 4673482 - 4672334 - | hypothetical protein Swoo_3831 4675503 - 4673485 - | hypothetical protein TERM 4783 4674762 - 4674750 - G 80 -5.5 -5.1356 | overlap 4674751 TGCTACTAACAAAAA CGGTC GGA GACCA TAAATAGCCAGCAGG Swoo_3832 4675810 - 4675595 - | hypothetical protein TERM 4784 4675881 - 4675868 - R 84 -4.5 -5.64421 | opp_overlap 4675868 4675871, overlap 4675869 ATCCTAAACAAAAAA CGGTG GTGT CACCA TGGTTAATTAACGAC Swoo_3833 4676842 - 4675943 - | ROK family protein TERM 4785 4676998 - 4676970 - R 76 -9 -3.75169 | opp_overlap 4676970 4676967 4676972 GATTATTTTATGAAA GAGGAGGTTT CTATCACGC AAACCTCCTC TCATTGAATAGCTGT Swoo_3834 4678097 - 4677033 - | anti-FecI sigma factor, FecR Swoo_3835 4678656 - 4678090 - | ECF subfamily RNA polymerase sigma-24 factor TERM 4786 4679017 - 4679007 - g 70 -2.6 -4.8855 | AAAAAATAAAAATAA TAAA TTT TTTA TGGAGGAAAAATTTC TERM 4787 4679222 - 4679245 + G 73 -6 -4.4078 | gap 1, opp_overlap 4679238 CTCATCTATCTGGCT GAGCAGGCGGA TAT TAC-CCTGCTC TTTTCATTCGAAAAG Swoo_3836 4678982 - 4682275 + | TonB-dependent receptor TERM 4788 4682295 - 4682324 + F 100 -13.8 -4.30396 | CTGACATCTGGTTGT TTAGCCTACATC ACCTTA GATGTAGGCTAA TTTCTGTCTTTAATT TERM 4789 4683589 - 4683605 + G 74 -7.9 -4.08767 | ACTACATTCTAAGTC GACGCTG TGA CAGCGAC TTTTGGAAAGATAAC Swoo_3837 4682352 - 4683926 + | tryptophan halogenase TERM 4790 4684152 - 4684121 - g 71 -4.3 -4.72272 | opp_overlap 4684131, overlap 4684122 TGTGCTGACTAAAAA TGGCGACACTGGT GCATTT ACCTTTGTCGCCC TACTGGGTTTTGGCG Swoo_3838 4683963 - 4684691 + | SapC family protein Swoo_3839 4684705 - 4685436 + | hypothetical protein Swoo_3840 4685475 - 4687046 + | SSS family solute/sodium (Na+) symporter TERM 4791 4687643 - 4687659 + F 79 -3.7 -5.40014 | opp_overlap 4687643 ATTAATAAATAATAG GTAATTC AAT GAAATAC TTTTTCTTCTTATTT Swoo_3841 4687651 - 4688046 + | hypothetical protein Swoo_3842 4688388 - 4688086 - | hypothetical protein TERM 4792 4689505 - 4689535 + H 100 -9.1 -5.95539 | overlap 4689501 TAAAAGCGAGTCCTT GCCGCTAGGTT TACTATCCC AACTTAGCGGC TTTTTTTCTTTGGAG Swoo_3843 4689645 - 4690010 + | hypothetical protein Swoo_3845 4690833 - 4690240 - | TetR family transcriptional regulator Swoo_3846 4690978 - 4691742 + | short-chain dehydrogenase/reductase SDR Swoo_3847 4691806 - 4692573 + | ThiJ/PfpI domain-containing protein TERM 4793 4692605 - 4692585 - f 83 -8.3 -4.52349 | ATAAACAAATAGAAA GCTCCTG TTACGTT CAGGAGC TAAACTCTAACTCTT Swoo_3848 4692637 - 4693182 + | OsmC family protein TERM 4794 4693213 - 4693241 + T 72 -9.5 -2.8547 | opp_overlap 4693214 GTTCGGCTTTAATAA AGGTGACTGGTAC TAA GTGCCAGCCACCA TATACTGTAAAAAAT TERM 4795 4693240 - 4693214 - T 100 -13 -4.15044 | opp_overlap 4693213 TTCGGCTTTAATAAA GGTGACTGGTAC TAA GTGCCAGCCACC ATATACTGTAAAAAA TERM 4796 4693496 - 4693524 + T 100 -15.4 -5.71983 | ATCGTGGTATTTTTT GCCGCTAGGTAG CCAAC CTACTTAGCGGC TTTTTTTGTCATTCA TERM 4797 4693594 - 4693612 + T 70 -8.8 -3.18383 | opp_overlap 4693594 TACACCAATAAAAAA CCGCCC TGTAGGT GGGCGG TTGGTAACTAAAGCT TERM 4798 4693612 - 4693594 - T 100 -8.8 -5.5353 | opp_overlap 4693594 TACACCAATAAAAAA CCGCCC TGTAGGT GGGCGG TTGGTAACTAAAGCT Swoo_3849 4694759 - 4693632 - | hypothetical protein TERM 4799 4694185 - 4694200 + g 83 -5.4 -5.22006 | AGCTCGACAGTACGG GAGTTG TCTA CGACTC TTTTTGTTGTCCTAG Swoo_3850 4696173 - 4694761 - | hypothetical protein TERM 4800 4696215 - 4696238 + r 74 -9.6 -3.08046 | opp_overlap 4696214, overlap 4696214 AAAGTGGGGGAAGAG GGTGCTAGCT GAAT AACTAGCACC ATTTTAAGATCGAGC Swoo_3851 4696855 - 4696256 - | membrane lipoprotein lipid attachment site Swoo_3852 4698239 - 4696866 - | hypothetical protein TERM 4801 4698519 - 4698500 - R 79 -5 -5.31519 | ACAGTTAAACAAAAA CCTTCAAT AACA AATGAAGG AGCCAGCAGAAAGTA Swoo_3853 4699633 - 4698833 - | hypothetical protein TERM 4802 4699736 - 4699700 - R 83 -11.8 -3.16564 | opp_overlap 4699700 TCCCCACTGTAGCAA TCGAGTTCCATTTAAC CTCGC GCTAAACGGAACTCAA TGTTAAAAACCTATT Swoo_3854 4701492 - 4699768 - | FAD linked oxidase domain-containing protein Swoo_3855 4701751 - 4701635 - | hypothetical protein TERM 4803 4701672 - 4701703 + g 72 -6.7 -4.20783 | opp_overlap 4701671, overlap 4701676 GTGATAACATAAACC TTACTGGCGAATA TCGCGT TATTCGCCATTAG TTTCTTAAATGCGAT TERM 4804 4701676 - 4701699 + g 77 -9.7 -3.69809 | opp_overlap 4701671, overlap 4701672 TAACATAAACCTTAC TGGCGAATA TCGCGT TATTCGCCA TTAGTTTCTTAAATG Swoo_3856 4702758 - 4701733 - | hypothetical protein TERM 4805 4702925 - 4702904 - R 73 -4.3 -4.98436 | GGAACACGATAAAAA GCGGACACT TAGG AGTTACCGC TTAGCGACTATAGCC Swoo_3857 4703443 - 4702919 - | putative lipoprotein Swoo_3858 4703910 - 4703515 - | endoribonuclease L-PSP Swoo_3859 4704997 - 4704206 - | prolipoprotein diacylglyceryl transferase Swoo_3860 4705685 - 4705197 - | GCN5-related N-acetyltransferase Swoo_3861 4706228 - 4705707 - | GCN5-related N-acetyltransferase TERM 4806 4706103 - 4706091 - G 70 -9.1 -3.14602 | overlap 4706089 GCTATCCCAGTAATA GCGAG ACT CTCGC TCACTGAAGGGAGTA Swoo_3862 4707903 - 4706620 - | 4-aminobutyrate aminotransferase Swoo_3863 4709406 - 4707949 - | succinic semialdehyde dehydrogenase Swoo_3864 4709552 - 4710472 + | LysR family transcriptional regulator Swoo_3865 4711130 - 4710498 - | lysine exporter protein LysE/YggA TERM 4807 4711537 - 4711522 - g 70 -5.4 -4.43909 | overlap 4711508 4711519 ACGCCAACAAAACAA GCTGAC GCTT ATCAGC AGGTGACGATTGACC TERM 4808 4713313 - 4713328 + G 72 -5.4 -4.49673 | AAATTGGTTCAATTT GCTGGA GTGG TTCAGC TTGTTTGTTTTATCT Swoo_3866 4711279 - 4714320 + | hypothetical protein TERM 4809 4714326 - 4714353 + F 83 -8.4 -4.40358 | opp_overlap 4714327 4714331, overlap 4714327 ACAAAACTAAACTTA AGGAAGCCAAGG CAAA CCTTAGCTTCCG TTTTATGCAGTAGCT TERM 4810 4714352 - 4714327 - f 100 -14.1 -3.37192 | opp_overlap 4714326 4714327, overlap 4714331 CAAAACTAAACTTAA GGAAGCCAAGG CAAA CCTTAGCTTCC GTTTTATGCAGTAGC TERM 4811 4714327 - 4714352 + F 89 -11.9 -3.23733 | opp_overlap 4714327 4714331, overlap 4714326 CAAAACTAAACTTAA GGAAGCCAAGG CAAA CCTTAGCTTCC GTTTTATGCAGTAGC Swoo_3867 4714823 - 4715110 + | antibiotic biosynthesis monooxygenase Swoo_3868 4715257 - 4715532 + | hypothetical protein Swoo_3869 4715705 - 4715583 - | hypothetical protein Swoo_3870 4716271 - 4715735 - | hypothetical protein Swoo_3871 4716567 - 4717931 + | Na+/H+ antiporter NhaC TERM 4812 4718003 - 4717982 - f 83 -10.1 -4.03093 | opp_overlap 4717982 CATAAGTACTATAAA GGAGGGCGA ACAA TAGCCCTCC TTTTTTATTTCTAAC TERM 4813 4717982 - 4718003 + F 100 -10.1 -5.72622 | opp_overlap 4717982 CATAAGTACTATAAA GGAGGGCGA ACAA TAGCCCTCC TTTTTTATTTCTAAC TERM 4814 4718157 - 4718174 + G 80 -6.3 -4.7497 | gap 1, opp_overlap 4718157 4718158, overlap 4718157 4718158 ACCTCAATAAATAAA G-GTGCAG TTA CTGCACGC TTTTTAATCCCTAAC TERM 4815 4718173 - 4718157 - g 78 -6.5 -4.68209 | opp_overlap 4718157 4718157 4718158, overlap 4718158 ACCTCAATAAATAAA GGTGCAG TTA CTGCACG CTTTTTAATCCCTAA TERM 4816 4718172 - 4718158 - g 76 -10 -3.39841 | opp_overlap 4718157 4718157 4718158, overlap 4718157 CCTCAATAAATAAAG GTGCAG TTA CTGCAC GCTTTTTAATCCCTA TERM 4817 4718158 - 4718172 + G 70 -10 -2.66218 | opp_overlap 4718158 4718157, overlap 4718157 4718157 CCTCAATAAATAAAG GTGCAG TTA CTGCAC GCTTTTTAATCCCTA Swoo_3872 4718103 - 4718888 + | hypothetical protein Swoo_3873 4718992 - 4719729 + | pseudouridine synthase TERM 4818 4719736 - 4719715 - f 74 -8.8 -3.67976 | opp_overlap 4719714 CTCATCAATCTTAAA TCAGCCTT GGAATG AAGGCTGA ATACATTTTCTTATT TERM 4819 4719787 - 4719803 + F 81 -9.5 -3.93398 | AATTGGTGTTGTGTT TGAAGGT TGT ACCTTCA TTGTTATCTATCGCT TERM 4820 4720198 - 4720208 + F 73 -8.2 -3.54638 | opp_overlap 4720172 4720171 TCTGGAACATTTTCT GCCC TGT GGGC TTTACGGCAGCTTCT Swoo_3874 4720822 - 4721163 + | hypothetical protein Swoo_3875 4721260 - 4721772 + | hypothetical protein Swoo_3876 4721888 - 4722397 + | hypothetical protein TERM 4821 4723067 - 4723091 + T 71 -9.4 -2.62921 | gap 1, opp_overlap 4723067, overlap 4723066 AAGCAAAGTAAAAAA GGCGC-TAAGT TTTC ACTTAAGCGCC CTTCTAGACTTGTAT TERM 4822 4723091 - 4723067 - T 100 -9.4 -5.41359 | gap 1, opp_overlap 4723067 4723066 AAGCAAAGTAAAAAA GGCGC-TAAGT TTTC ACTTAAGCGCC CTTCTAGACTTGTAT Swoo_3877 4725332 - 4723176 - | hypothetical protein TERM 4823 4725453 - 4725485 + r 100 -14.4 -3.96148 | gap 1, opp_overlap 4725453 AAAGGCATAAAAAAA GTCGAGCTCG-ATAT TTGC ATATTCGAGCTCGAC TTTATCATAGGCAAA TERM 4824 4725485 - 4725453 - R 100 -14.4 -5.68039 | gap 1, opp_overlap 4725453 AAAGGCATAAAAAAA GTCGAGCTCG-ATAT TTGC ATATTCGAGCTCGAC TTTATCATAGGCAAA Swoo_3878 4726751 - 4725576 - | aromatic amino acid permease TERM 4825 4726207 - 4726193 - G 71 -10 -2.80981 | overlap 4726192 AGGTGAAAACAACAG GGATGG CTG CCATCC AAAGATCAACCTTAC TERM 4826 4727179 - 4727153 - R 100 -12.5 -4.40184 | opp_overlap 4727153 TGAACTAAACATAAA TTACAGGTCAT TAGAG ATGACCTGTAA TTACATATCTAACTA TERM 4827 4727153 - 4727179 + r 95 -13.2 -3.16475 | opp_overlap 4727153 TGAACTAAACATAAA TTACAGGTCATT AGA GATGACCTGTAA TTACATATCTAACTA Swoo_3879 4728643 - 4727210 - | chitin-binding domain-containing protein TERM 4828 4727304 - 4727333 + g 76 -5.7 -4.74103 | opp_overlap 4727310, overlap 4727305 CAGTAGCCACTGTAT GGGAAAGGCTTAC ATTG GTAAGTCTTGCCA TTTTTAGGTTGAAAC TERM 4829 4727305 - 4727332 + g 73 -9.2 -3.4398 | opp_overlap 4727310, overlap 4727304 AGTAGCCACTGTATG GGAAAGGCTTAC ATTG GTAAGTCTTGCC ATTTTTAGGTTGAAA Swoo_3880 4729321 - 4729887 + | hypothetical protein TERM 4830 4729983 - 4729937 - T 100 -12.4 -5.64421 | opp_overlap 4729937 AGGCCAAACAAAAAA GGTTACGAGTTAACGCTGAGAT ATA ACCTCAATGCTTACCCGTAACC TTAATATAAGTAACT Swoo_3881 4731496 - 4730054 - | catalase TERM 4831 4731420 - 4731435 + g 74 -7.5 -4.28651 | TCAAGTAGCATAGGT CCGCG TTTACC CGCGG TTTTCACATTTTGGT TERM 4832 4731839 - 4731824 - R 76 -4.7 -5.13648 | overlap 4731825 CAAAGATAAACAAAA GGAGA GCAATG TCTCC CAAGGATTTATCCTT TERM 4833 4731998 - 4731967 - R 73 -8.2 -3.56837 | gap 1, opp_overlap 4731975, overlap 4731969 4731970 GGGTAAATAGGATAA GAGTTGAATTCAGGC AGT GCCTGAATTCAA-TA ACAACAAGTGTTCAA TERM 4834 4731997 - 4731969 - R 100 -13.3 -3.35535 | opp_overlap 4731975, overlap 4731967 4731970 GTAAATAGGATAAGA GTTGAATTCAGGC AGT GCCTGAATTCAAT AACAACAAGTGTTCA TERM 4835 4731996 - 4731970 - R 100 -16.8 -2.60598 | opp_overlap 4731975, overlap 4731969 4731967 TAAATAGGATAAGAG TTGAATTCAGGC AGT GCCTGAATTCAA TAACAACAAGTGTTC TERM 4836 4731975 - 4731991 + r 79 -10.9 -3.05384 | opp_overlap 4731970 4731969 4731967 AGGATAAGAGTTGAA TTCAGGC AGT GCCTGAA TTCAATAACAACAAG Swoo_3882 4732299 - 4732021 - | hypothetical protein TERM 4837 4732392 - 4732368 - R 89 -10.2 -4.50058 | opp_overlap 4732373 TATTGATAACGAAAA TCTAATCATG CATAT CATGATTAGA TATAAAATCTAGCGC TERM 4838 4732459 - 4732446 - R 73 -8.1 -3.70019 | opp_overlap 4732446, overlap 4732436 4732444 AGCAACTGCAAAAGA GCAGC AGAT GCTGC TAACTTGACTCGTTA TERM 4839 4732557 - 4732544 - R 73 -8.1 -3.70019 | opp_overlap 4732544, overlap 4732534 4732542 AGCAACTGCAAAAGA GCAGC AGAT GCTGC TAACTTGACTCATTA TERM 4840 4732655 - 4732642 - R 73 -8.1 -3.70019 | opp_overlap 4732642, overlap 4732632 4732640 AGCAACTGCAAAAGA GCAGC AGAT GCTGC TAACTTGACTCGTTA Swoo_3883 4733132 - 4732695 - | thioesterase superfamily protein TERM 4841 4733244 - 4733229 - R 79 -7.6 -4.2074 | CTTTCAATAGAGAAA TGACAC GAAA GTGTCA CTAGGGTGGCTCCCG TERM 4842 4733378 - 4733343 - R 95 -12.8 -3.68222 | gap 1, opp_overlap 4733352 GGGTAACCGCAATAA CTGGGATAAGCTGCC TTTGTGC GGCAGCTTATCC-AG ACTAGATTAAGCGAA Swoo_3884 4734106 - 4733396 - | purine nucleoside phosphorylase TERM 4843 4734126 - 4734146 + r 74 -8.9 -3.66999 | opp_overlap 4734125 TTTCCTAAAAGTTAG GCGCCGCAT CAA GTACGGCGC TTTCAATAAATACGT Swoo_3885 4735394 - 4734168 - | Na+ dependent nucleoside transporter TERM 4844 4735700 - 4735689 - R 70 -3 -5.15381 | AATAGATCTAAAAAA TACA AAAA TGTA ATTAAATAACACCAA TERM 4845 4735806 - 4735830 + r 100 -18.7 -3.32993 | opp_overlap 4735806 TAGCCCTATAAAAAA CCGTCTTAGGC TTA GCCTAAGACGG TTAGTGTGTAACTAC TERM 4846 4735830 - 4735806 - R 100 -18.7 -5.252 | opp_overlap 4735806 TAGCCCTATAAAAAA CCGTCTTAGGC TTA GCCTAAGACGG TTAGTGTGTAACTAC Swoo_3886 4738540 - 4735856 - | endonuclease/exonuclease/phosphatase TERM 4847 4737440 - 4737452 + g 73 -6.3 -4.30719 | overlap 4737436 TGGTGATTTATGGGA CAACA CCA TGTTG TTTCTTCTACCGGCG TERM 4848 4738486 - 4738507 + g 86 -7.3 -5.11033 | GCAAAGCAGCGGCTA TTGACAGTG CAAG CACTGACAA TTTTTTAACATTATC TERM 4849 4739169 - 4739142 - R 85 -11.4 -3.65112 | opp_overlap 4739142 4739149, overlap 4739149 AGCGAAACTAGATAA TAAAAAACGGCG TTAT CGCCGTTTATTA TTTTAAAACTTTAAG TERM 4850 4739142 - 4739169 + r 90 -11.4 -4.17089 | opp_overlap 4739142 4739149, overlap 4739149 AGCGAAACTAGATAA TAAAAAACGGCG TTAT CGCCGTTTATTA TTTTAAAACTTTAAG TERM 4851 4739149 - 4739162 + r 88 -9.5 -4.67697 | opp_overlap 4739142 4739149, overlap 4739142 CTAGATAATAAAAAA CGGCG TTAT CGCCG TTTATTATTTTAAAA TERM 4852 4739162 - 4739149 - R 100 -9.5 -5.60689 | opp_overlap 4739149 4739142, overlap 4739142 CTAGATAATAAAAAA CGGCG TTAT CGCCG TTTATTATTTTAAAA Swoo_3887 4739845 - 4739180 - | LuxR family transcriptional regulator Swoo_3888 4740723 - 4740121 - | hypothetical protein TERM 4853 4741468 - 4741448 - g 74 -11.1 -2.66522 | overlap 4741444 ATCGAAGATAAGCTA CCACTGGGC AAT GCCCAGCAG ATCCACTCGATGCAG TERM 4854 4741678 - 4741660 - g 84 -9.6 -4.24002 | GCTTAAAGCTGAAAA GATAGCTG GTG CAGCCATC GACGTTTTCCCTGTA Swoo_3889 4740890 - 4742119 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 4855 4742188 - 4742153 - f 93 -10.5 -4.98531 | opp_overlap 4742155 4742177, overlap 4742155 4742177 GCGGTAAACTAAAAA TATCGGGCGTACAAT GTAAAA ATTGTGCGCCCGATT TATATCCGTCGCCCC TERM 4856 4742186 - 4742155 - f 100 -13.1 -4.11472 | opp_overlap 4742155 4742177, overlap 4742153 4742177 GGTAAACTAAAAATA TCGGGCGTACAAT GTAAAA ATTGTGCGCCCGA TTTATATCCGTCGCC TERM 4857 4742155 - 4742186 + F 100 -15.3 -4.0641 | opp_overlap 4742155 4742153 4742177, overlap 4742177 GGTAAACTAAAAATA TCGGGCGTACAAT GTAAAA ATTGTGCGCCCGA TTTATATCCGTCGCC TERM 4858 4742561 - 4742582 + G 71 -9.5 -2.9914 | opp_overlap 4742542 4742554, overlap 4742559 4742565 CTAAATACGCCGTGT TCAGCAAGG CTGA CCTTGTTGA TGTATCTGCAGACTG TERM 4859 4743031 - 4743045 + G 77 -10 -3.54543 | AGCCGATTGGAGCTT GCCATC GAA GATGGC TTTAAAAAGGTCGGT Swoo_3890 4742254 - 4743216 + | folate-binding protein YgfZ TERM 4860 4743290 - 4743276 - f 91 -9.2 -4.85782 | opp_overlap 4743276 CGTTTCAAAAATAAA GGCGCC TAG AGCGCC TTTTTTATCGGCTTA TERM 4861 4743276 - 4743290 + F 100 -8.5 -5.27923 | opp_overlap 4743276 CGTTTCAAAAATAAA GGCGC CTAGA GCGCC TTTTTTATCGGCTTA TERM 4862 4744738 - 4744714 - g 77 -9.3 -3.82864 | opp_overlap 4744714 AGGCAAGAAAACCAA GGTCATGAAGA ATA TCGCCATGACC TCCTATGATGTCGTG Swoo_3891 4743443 - 4746682 + | peptidase S41 TERM 4863 4746706 - 4746740 + T 100 -14.4 -3.33315 | opp_overlap 4746716, overlap 4746709 4746716 TATCGATGATTGATG GATTAAAAAAGGCGCC TAG GGCGCCTTTTTTATGC TTGTAAAAGTGTTAC TERM 4864 4746709 - 4746737 + T 100 -19.1 -2.83449 | opp_overlap 4746716, overlap 4746706 4746716 CGATGATTGATGGAT TAAAAAAGGCGCC TAG GGCGCCTTTTTTA TGCTTGTAAAAGTGT TERM 4865 4746716 - 4746730 + T 100 -12.8 -5.39755 | opp_overlap 4746716, overlap 4746709 4746706 TGATGGATTAAAAAA GGCGCC TAG GGCGCC TTTTTTATGCTTGTA TERM 4866 4746730 - 4746716 - T 100 -12.8 -5.1675 | opp_overlap 4746716 4746709 4746706 TGATGGATTAAAAAA GGCGCC TAG GGCGCC TTTTTTATGCTTGTA Swoo_3892 4747318 - 4746752 - | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN TERM 4867 4747762 - 4747728 - H 72 -8.7 -3.35342 | gap 1, opp_overlap 4747729 4747758 4747759 AACAAAAATACCTAA CGGCTTAGATGCTACA TCCA TGTAGC-TCCAAGCCT TATCCATCATCCATG TERM 4868 4747729 - 4747761 + H 78 -10 -3.37975 | gap 1, opp_overlap 4747728, overlap 4747758 4747759 ACAAAAATACCTAAC GGCTTAGATGCTACA TCCA TGTAGC-TCCAAGCC TTATCCATCATCCAT Swoo_3893 4747966 - 4748361 + | TraR/DksA family transcriptional regulator TERM 4869 4748859 - 4748870 + F 74 -5.8 -4.56729 | opp_overlap 4748858 4748859 ACAAGACAAAAATAT GGCA GTCC TGCC TTTTAGTCTTTTGGT Swoo_3894 4748978 - 4749721 + | hypothetical protein TERM 4870 4750006 - 4750020 + T 70 -8.5 -3.32963 | AGTGCCGTCCTAGCA GGGCG AAACC CGCCC TTCTCAGCTAAAAAT Swoo_3895 4750668 - 4750150 - | hypothetical protein TERM 4871 4750757 - 4750732 - R 77 -6.1 -4.85267 | opp_overlap 4750731, overlap 4750751 AGAAACCACGAAAAA GCTGTCCAG AAATAAAA CGGGACAGC CATATCTTTGTCTAT Swoo_3896 4751310 - 4750903 - | hypothetical protein Swoo_3897 4751832 - 4751401 - | hypothetical protein Swoo_3898 4752215 - 4751928 - | hypothetical protein Swoo_3899 4752958 - 4752284 - | hypothetical protein TERM 4872 4753380 - 4753397 + G 72 -5.5 -4.58395 | opp_overlap 4753369 4753379 4753380 4753390 GAAACGGACAGTAAC TGGCAGC AAAG GCTGGCA TTTTTCAGCCCTAAA Swoo_3900 4753254 - 4754171 + | histone deacetylase superfamily protein Swoo_3901 4754587 - 4754258 - | low molecular weight phosphotyrosine protein phosphatase Swoo_3902 4755274 - 4754618 - | peptide chain release factor H TERM 4873 4755044 - 4755071 + g 81 -12.2 -3.01791 | opp_overlap 4755029 CATTGCTCCTTGCCA TGACTTAGCTAG CTGT TTAGCTAAGTCA TCTTCCCCCAACACT Swoo_3903 4756449 - 4755271 - | release factor H-coupled RctB family protein TERM 4874 4757179 - 4757169 - H 71 -4 -4.8743 | TTTAAAAGAAACAAA TATG AAA CATA CAATATTTTGTTTAC Swoo_3904 4757170 - 4758162 + | cytochrome-c peroxidase TERM 4875 4759856 - 4759839 - g 76 -4.1 -5.16472 | overlap 4759841 AAAAAGTCTAAAAAA GCCAAGA TATC TCTTGCC GATCTCATTGTATTG Swoo_3905 4758249 - 4760459 + | catalase/peroxidase HPI Swoo_3906 4760552 - 4760974 + | globin Swoo_3907 4762468 - 4760993 - | FAD dependent oxidoreductase Swoo_3908 4763633 - 4762875 - | hypothetical protein Swoo_3909 4763881 - 4765953 + | endothelin-converting protein 1 TERM 4876 4765995 - 4766016 + F 100 -14.5 -5.24531 | opp_overlap 4765995 TAAAGCAAGTAAAAA GCCAGTCAG ATCA CTGACTGGC TTTTTTATCACAACT TERM 4877 4766016 - 4765995 - f 100 -14.5 -4.95957 | opp_overlap 4765995 TAAAGCAAGTAAAAA GCCAGTCAG ATCA CTGACTGGC TTTTTTATCACAACT Swoo_3910 4766279 - 4766590 + | hypothetical protein TERM 4878 4766648 - 4766623 - T 79 -7.7 -4.29981 | opp_overlap 4766623 GAAAGAGATTCAAAA GAGATCTAG TGTGTATT CTAGATCTC TTTTACGAGTCTTAA TERM 4879 4766623 - 4766648 + T 75 -7.7 -4.14472 | opp_overlap 4766623 GAAAGAGATTCAAAA GAGATCTAG TGTGTATT CTAGATCTC TTTTACGAGTCTTAA Swoo_3911 4767871 - 4766681 - | hypothetical protein Swoo_3912 4769785 - 4768025 - | flavocytochrome c TERM 4880 4768150 - 4768169 + g 71 -8 -3.84514 | overlap 4768153 CAGCATACAAGCCTT TAATGATG TCAC CATCATTA TTTAATACTTCCGCT TERM 4881 4769891 - 4769867 - R 83 -8 -4.62783 | opp_overlap 4769867 4769889 TATTTATGCTAAAAA GACATCAAAC TATCG ATTTGATGTC TTCTTAAGGCTTAAT Swoo_3913 4771574 - 4769916 - | phenylalanine/histidine ammonia-lyase Swoo_3914 4771828 - 4772685 + | glutathione S-transferase domain-containing protein TERM 4882 4772705 - 4772724 + F 89 -12.2 -3.25942 | opp_overlap 4772705 TTTACTCATTAAAAA TGCCACTC AACC GAGTGGCA TTAATGTACAGACCT TERM 4883 4772724 - 4772705 - f 100 -12.2 -4.7497 | opp_overlap 4772705 TTTACTCATTAAAAA TGCCACTC AACC GAGTGGCA TTAATGTACAGACCT TERM 4884 4774103 - 4774137 + G 72 -7.1 -4.06055 | gap 1 TGGATGATTTTATTA GCGAGGGC-GATCATG TTGC CATGCTCAGCCCCTGC TTTGATTTCACCACT Swoo_3915 4773091 - 4775232 + | PKD domain-containing protein TERM 4885 4775273 - 4775308 + T 100 -17.8 -4.42788 | opp_overlap 4775275, overlap 4775275 TCAGGGTAAAGTGTA AAGAGCCAGTATCAAC GAAT GTTGATACTGGCTCTC TTTTATCAGCTTAAA TERM 4886 4775275 - 4775306 + T 100 -20.4 -3.81948 | opp_overlap 4775275, overlap 4775273 AGGGTAAAGTGTAAA GAGCCAGTATCAAC GAAT GTTGATACTGGCTC TCTTTTATCAGCTTA TERM 4887 4775306 - 4775275 - T 100 -20.4 -3.71917 | opp_overlap 4775275 4775273 AGGGTAAAGTGTAAA GAGCCAGTATCAAC GAAT GTTGATACTGGCTC TCTTTTATCAGCTTA Swoo_3916 4775824 - 4775336 - | hypothetical protein Swoo_3917 4776112 - 4775864 - | hypothetical protein TERM 4888 4776208 - 4776190 - R 86 -9.6 -4.45083 | opp_overlap 4776190 TTTACACTGACAAAA GCCTGCAA CTA TTACAGGC TTTCAGTGACAGCTT Swoo_3918 4778293 - 4776248 - | TonB-dependent receptor Swoo_3919 4779779 - 4778433 - | integral membrane sensor signal transduction histidine kinase TERM 4889 4779205 - 4779248 + g 79 -9.7 -3.83409 | gap 1 CGCACATCAAACTTT CCCTTGCTGAAGCGACGAGT GGCCA ACT-GTAGTTGCAGCAAGGG TTTCATAATGTGTCG Swoo_3920 4780474 - 4779776 - | two component transcriptional regulator Swoo_3921 4780813 - 4781352 + | hypothetical protein TERM 4890 4781384 - 4781411 + G 76 -10.7 -2.98823 | CTACTCGTTATGTTT TTAGGTGGTTG CCAAGC CAACCACCTAG TCTATGTGCAGGAAA Swoo_3922 4781345 - 4781695 + | hypothetical protein TERM 4891 4782255 - 4782240 - g 100 -2.6 -5.94597 | GAATAGCAAAAAAAA TTTAAC AGAT GTCAAA GGTAACCAAGTCAAC Swoo_3923 4781695 - 4782519 + | hypothetical protein Swoo_3924 4782530 - 4782784 + | hypothetical protein TERM 4892 4782879 - 4782846 - f 80 -9.8 -3.60074 | gap 2, opp_overlap 4782854, overlap 4782837 4782847 CATAAACCCCTTAAA GC-G-GATAAGCCCAA GATC TTGGGCTTATCTCAGC CAGTATATAAATATA TERM 4893 4782877 - 4782847 - f 74 -9.9 -2.75562 | gap 1, opp_overlap 4782854, overlap 4782837 4782846 ATAAACCCCTTAAAG CG-GATAAGCCCAA GATC TTGGGCTTATCTCA GCCAGTATATAAATA TERM 4894 4782854 - 4782869 + F 74 -9 -3.48593 | opp_overlap 4782847 4782846 CCTTAAAGCGGATAA GCCCAA GATC TTGGGC TTATCTCAGCCAGTA TERM 4895 4784056 - 4784043 - g 79 -9.5 -3.76952 | overlap 4784037 TCCATCGAAGGCAAA CGCGG ACTG CCGCG ACATCGTCCACCGTT TERM 4896 4784477 - 4784457 - g 70 -7.5 -3.90318 | GTATTATCGGATAAA GACAGCATC CGC GACGCCGCC CTTAATATGATGGAG Swoo_3925 4783011 - 4784699 + | respiratory-chain NADH dehydrogenase domain-containing protein TERM 4897 4786831 - 4786819 - g 73 -6.2 -4.39426 | CAGATGGGGAGAAAA GCGC TGGAT GCGC CGGGAGAAGCCAAGC Swoo_3926 4784704 - 4787478 + | formate dehydrogenase, alpha subunit Swoo_3927 4787704 - 4787471 - | hypothetical protein TERM 4898 4787817 - 4787800 - R 100 -11.3 -5.29782 | opp_overlap 4787800 TATAGCCACAAAAAA GCGAACC ATAA GGTTCGC TTTTTTGCTCTAGTA TERM 4899 4787800 - 4787817 + r 100 -11.3 -5.23316 | opp_overlap 4787800 TATAGCCACAAAAAA GCGAACC ATAA GGTTCGC TTTTTTGCTCTAGTA Swoo_3928 4790026 - 4787840 - | hypothetical protein Swoo_3929 4790473 - 4792068 + | deoxyribodipyrimidine photolyase-related protein TERM 4900 4792695 - 4792685 - g 70 -6.8 -4.10164 | opp_overlap 4792684 4792685 TTATCACCAGACAAA GCGT TTA ACGC GTTTAAGTTACGCTA TERM 4901 4792750 - 4792734 - g 71 -4.3 -4.62904 | opp_overlap 4792747 4792748, overlap 4792737 4792745 AAACACCTTGAAAAA CTACCAC TAA GTGGCGG CGAAGACGCCTAGTG Swoo_3930 4792104 - 4792763 + | hypothetical protein TERM 4902 4792747 - 4792775 + T 79 -9.5 -3.82865 | opp_overlap 4792734 4792745, overlap 4792748 AACTACCACTAAGTG GCGGCGAAGACGC CTA GTGTCTTCGCCAA TTTAAATATTGTTTA TERM 4903 4792748 - 4792774 + T 90 -13 -2.88634 | opp_overlap 4792734 4792745, overlap 4792747 ACTACCACTAAGTGG CGGCGAAGACGC CTA GTGTCTTCGCCA ATTTAAATATTGTTT Swoo_3931 4793143 - 4792799 - | hypothetical protein TERM 4904 4793235 - 4793223 - H 70 -6.3 -4.21607 | TTTACCTAACATAAA TTCCA AAA TGGAA TGCATATGGATAAGT TERM 4905 4793944 - 4793929 - g 71 -9 -3.3579 | overlap 4793927 AAATGCTTTTAAAGA TGTCCC TTAT GGGACA CGGCATATCAGCCCT Swoo_3932 4793241 - 4794137 + | LysR family transcriptional regulator Swoo_3934 4794750 - 4794361 - | hypothetical protein TERM 4906 4795283 - 4795301 + G 76 -6 -4.57581 | TACCTAGGTGCTGCA TATCTGGC TTG GCTAGGTA TTTGTTCTTTACGAT Swoo_3935 4795040 - 4795651 + | lysine exporter protein LysE/YggA TERM 4907 4796965 - 4796955 - g 71 -2.4 -5.07486 | GATCTGGAATAAAAA CTGC TTT GCGG TAGGGCTTTCCAGCG TERM 4908 4797026 - 4797048 + G 79 -7 -4.68994 | opp_overlap 4797026 TTTCGCTGATACAGA GTGCAATAGC TAA GCTATTGAGC TTTTTCCCTGATACT Swoo_3936 4795945 - 4797480 + | tryptophan halogenase TERM 4909 4797471 - 4797457 - T 75 -10 -2.91383 | opp_overlap 4797459, overlap 4797459 ACCTTTATTGATAGA CACTGC AAA GCAGTG TCTCAATAGACAAGT Swoo_3937 4798995 - 4797487 - | tryptophan halogenase TERM 4910 4798588 - 4798574 - G 79 -4.9 -5.16237 | overlap 4798575 AAGGGCAGGAAAAAA CGCCC TTGCT GGGCA AGTACTGCCTCGGGA Swoo_3938 4800548 - 4799031 - | tryptophan halogenase TERM 4911 4800626 - 4800645 + r 100 -16.4 -4.04576 | opp_overlap 4800626 CATTTTACACAAAAA GGCGCCGC ATAT GCGGCGCC TTTCATTATGTACAT TERM 4912 4800645 - 4800626 - R 100 -16.4 -4.9792 | opp_overlap 4800626 CATTTTACACAAAAA GGCGCCGC ATAT GCGGCGCC TTTCATTATGTACAT Swoo_3939 4803734 - 4800681 - | TonB-dependent receptor TERM 4913 4801205 - 4801195 - G 73 -4.6 -4.83169 | ACTGGTGTAGAAAAA GGCC AAG GACC ACGTTTAACACCATC TERM 4914 4803907 - 4803920 + r 71 -3.9 -4.98436 | opp_overlap 4803907, overlap 4803901 ACAACATCTAAAAAA TTGAT TTAA ATCAA TTTTTATAATATTCG TERM 4915 4803920 - 4803907 - R 73 -3.9 -5.17054 | opp_overlap 4803907 4803901 ACAACATCTAAAAAA TTGAT TTAA ATCAA TTTTTATAATATTCG Swoo_3940 4805050 - 4804163 - | SMP-30/gluconolaconase/LRE domain-containing protein TERM 4916 4806897 - 4806879 - g 71 -3.8 -4.74084 | opp_overlap 4806882, overlap 4806882 AAAGCAAAATTAAAA CAAGCTCC TGT AGAGCTCA TTGCTGATCATAATA TERM 4917 4806894 - 4806882 - g 70 -5.5 -4.43392 | opp_overlap 4806882, overlap 4806879 GCAAAATTAAAACAA GCTCC TGT AGAGC TCATTGCTGATCATA Swoo_3941 4805214 - 4807649 + | Beta-N-acetylhexosaminidase Swoo_3942 4810301 - 4807695 - | UTP-GlnB uridylyltransferase, GlnD Swoo_3943 4810643 - 4811866 + | hypothetical protein Swoo_3944 4812239 - 4811991 - | hypothetical protein Swoo_3945 4812503 - 4812940 + | CMP/dCMP deaminase zinc-binding TERM 4918 4812981 - 4812963 - T 93 -11.7 -4.21773 | opp_overlap 4812963 CTTGAACATAAAGAA GGACGCC CAAGT GGCGTCC TTTTTCATTTCGTAT TERM 4919 4812963 - 4812981 + T 100 -11.7 -5.02715 | opp_overlap 4812963 CTTGAACATAAAGAA GGACGCC CAAGT GGCGTCC TTTTTCATTTCGTAT Swoo_3946 4813569 - 4813159 - | hypothetical protein Swoo_3947 4814255 - 4814686 + | hypothetical protein Swoo_3948 4814778 - 4815293 + | cation antiporter Swoo_3949 4815293 - 4815589 + | multiple resistance and pH regulation protein F Swoo_3950 4815586 - 4815927 + | monovalent cation/proton antiporter, MnhG/PhaG subunit TERM 4920 4816681 - 4816703 + G 78 -10.6 -3.24747 | opp_overlap 4816681 TTAACCCGTCGATAA TCCAGCTGCT CGC AGCGGTTGGA TTGCTGATCTACGCC Swoo_3951 4815954 - 4816949 + | Na+/H+ antiporter MnhB subunit-related protein TERM 4921 4817024 - 4817038 + G 71 -5 -4.58395 | opp_overlap 4817024 ATTTGATAAAGAAAC TAGTCG GAC TGACTA TTTTTCAAACCTCAG Swoo_3952 4816930 - 4817292 + | NADH-ubiquinone oxidoreductase chain 4L TERM 4922 4817549 - 4817567 + G 81 -9.6 -4.0274 | ACTGCTCATCATCTC CACCATAG GCA CTGTGGTG TTGTTTGCTGCTCAA TERM 4923 4817857 - 4817871 + G 71 -10 -2.73124 | opp_overlap 4817869, overlap 4817856 ACCAGATGACTGGCA CGCTCA ACA TGAGCG ATTTGGCCACTCGAC TERM 4924 4818038 - 4818059 + G 72 -10.1 -2.96216 | overlap 4818040 CGCATTTTTAGCGGC CACCGCAAC TAAG GTGGCGGTG TATCTGCTGATCCGC TERM 4925 4818213 - 4818239 + G 71 -9.4 -3.03741 | GTTAAGCATATCTTG GCCTACTCGAGT ATC GCTCAAGTGGGC TATATGATTATCGGT Swoo_3953 4817292 - 4818770 + | NADH dehydrogenase (quinone) Swoo_3954 4818767 - 4820260 + | NADH dehydrogenase (quinone) Swoo_3955 4820250 - 4820606 + | hypothetical protein TERM 4926 4821481 - 4821507 + G 81 -11 -3.50335 | GGTGCGGTATCTCAC GCCTTTAATGAT GTG ATCTTTAAAGGC TTACTGTTTATGAGC Swoo_3956 4820593 - 4822293 + | NADH dehydrogenase (quinone) TERM 4927 4822374 - 4822347 - f 100 -18.6 -3.76169 | opp_overlap 4822347 TTAACATGAATACAA GCGGCTTGCATA GTGA TATGCAAGCCGC TTTGTTATGCTATTC TERM 4928 4822347 - 4822374 + F 100 -18.6 -4.39277 | opp_overlap 4822347 TTAACATGAATACAA GCGGCTTGCATA GTGA TATGCAAGCCGC TTTGTTATGCTATTC TERM 4929 4822729 - 4822757 + G 81 -11.7 -3.04196 | overlap 4822746 CATGGCTGTTTTGCT TCAGCCGGCATGT TTC GCAAGCTGGCTGA TGTGTATGCCTTTCA Swoo_3957 4822495 - 4823475 + | hypothetical protein TERM 4930 4824053 - 4824042 - g 74 -2.2 -5.28176 | overlap 4824048 GTCACTGAGAAAAAA GCCA AACT TGAC GAACAAGAAGCCGTT Swoo_3958 4823637 - 4824938 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 4931 4824980 - 4824965 - T 90 -11.8 -4.09459 | opp_overlap 4824965 TCAAAAACTCACAAA CGCGCC TAGT GGCGCG TTTTTTCTTACAAAC TERM 4932 4824965 - 4824980 + T 100 -11.8 -5.4505 | opp_overlap 4824965 TCAAAAACTCACAAA CGCGCC TAGT GGCGCG TTTTTTCTTACAAAC TERM 4933 4825121 - 4825103 - T 78 -7.4 -4.3767 | opp_overlap 4825103 GGAGAGGAGAACAAA CGCACC AATTAAG GGTGCG TTTTACCTAACTGAG TERM 4934 4825103 - 4825121 + T 73 -7.4 -4.19817 | opp_overlap 4825103 GGAGAGGAGAACAAA CGCACC AATTAAG GGTGCG TTTTACCTAACTGAG Swoo_3959 4825545 - 4825153 - | hypothetical protein Swoo_3960 4826274 - 4827179 + | hypothetical protein Swoo_3961 4827190 - 4827813 + | hypothetical protein TERM 4935 4828591 - 4828604 + T 70 -8.1 -3.23251 | overlap 4828589 4828588 TAGAGGGAATCTGTA CCCAC AATT GTGGG TGTCTTAGTTATTGG Swoo_3962 4829357 - 4828692 - | two component transcriptional regulator Swoo_3963 4830742 - 4829378 - | integral membrane sensor signal transduction histidine kinase Swoo_3964 4831221 - 4830796 - | hypothetical protein Swoo_3965 4831859 - 4831461 - | hypothetical protein TERM 4936 4832236 - 4832273 + r 91 -9.3 -5.11063 | opp_overlap 4832237 4832241, overlap 4832220 4832237 4832241 TCAATTTAATAATAA ATTTAGTTGATGGTTCA AATT TGAACCATCAACTTGAG TTTTTATTCAATCAT TERM 4937 4832272 - 4832237 - R 89 -10.6 -4.4846 | opp_overlap 4832220 4832236 4832237 4832241, overlap 4832241 CAATTTAATAATAAA TTTAGTTGATGGTTCA AATT TGAACCATCAACTTGA GTTTTTATTCAATCA TERM 4938 4832237 - 4832272 + r 95 -12.8 -3.65554 | opp_overlap 4832237 4832241, overlap 4832220 4832236 4832241 CAATTTAATAATAAA TTTAGTTGATGGTTCA AATT TGAACCATCAACTTGA GTTTTTATTCAATCA TERM 4939 4832241 - 4832268 + r 100 -15.8 -3.52358 | opp_overlap 4832237 4832241, overlap 4832237 4832236 TTAATAATAAATTTA GTTGATGGTTCA AATT TGAACCATCAAC TTGAGTTTTTATTCA TERM 4940 4832268 - 4832241 - R 100 -15.8 -2.8071 | opp_overlap 4832241 4832237 4832236, overlap 4832237 TTAATAATAAATTTA GTTGATGGTTCA AATT TGAACCATCAAC TTGAGTTTTTATTCA Swoo_3966 4834668 - 4832281 - | phospholipase/carboxylesterase TERM 4941 4834521 - 4834543 + g 70 -10 -2.52516 | overlap 4834520 4834523 TATACACAACTTCGA TACTTTCGTT ACC AACGAGAGTA ATTACTGGTGGGGCA TERM 4942 4834874 - 4834891 + r 86 -11.3 -4.1721 | opp_overlap 4834874 ATGGAAACTAAAAAA GCGAACC GATT GGTTCGC TTTTCAAATCTAGCT TERM 4943 4834891 - 4834874 - R 100 -11.3 -5.38497 | opp_overlap 4834874 ATGGAAACTAAAAAA GCGAACC GATT GGTTCGC TTTTCAAATCTAGCT TERM 4944 4835071 - 4835054 - R 100 -11.3 -5.46657 | opp_overlap 4835054 TACCCCAATAAAAAA GCGAACC AATC GGTTCGC TTTCAAATCTAGCTC TERM 4945 4835054 - 4835071 + r 83 -11.3 -3.64103 | opp_overlap 4835054 TACCCCAATAAAAAA GCGAACC AATC GGTTCGC TTTCAAATCTAGCTC Swoo_3967 4838140 - 4835231 - | glycine dehydrogenase TERM 4946 4835489 - 4835459 - G 79 -11.8 -2.80816 | opp_overlap 4835456 4835455 TGGCCACTCACCAGA CTCGACTCGTGCCG CTT CGGCGCGAATTGAG ACCATTGCTTCGATA TERM 4947 4837562 - 4837572 + g 72 -6.8 -4.26903 | opp_overlap 4837562 4837560 TTCCATACCAAAACA CTCG GCG CGAG TTTTAATCACATCCA TERM 4948 4838312 - 4838281 - R 100 -17.6 -3.45945 | opp_overlap 4838281 4838285, overlap 4838285 CTTAGCTATAACGAA CAAAGCCTCATTTT GGAA AAAATGAGGCTTTG TTTTTAATCGGCGAT TERM 4949 4838281 - 4838312 + r 100 -17.6 -4.7254 | opp_overlap 4838281 4838285, overlap 4838285 CTTAGCTATAACGAA CAAAGCCTCATTTT GGAA AAAATGAGGCTTTG TTTTTAATCGGCGAT TERM 4950 4838308 - 4838285 - R 100 -12.6 -4.36596 | opp_overlap 4838281 4838285, overlap 4838281 GCTATAACGAACAAA GCCTCATTTT GGAA AAAATGAGGC TTTGTTTTTAATCGG TERM 4951 4838285 - 4838308 + r 100 -12.6 -4.91852 | opp_overlap 4838285 4838281, overlap 4838281 GCTATAACGAACAAA GCCTCATTTT GGAA AAAATGAGGC TTTGTTTTTAATCGG TERM 4952 4838371 - 4838344 - R 78 -10 -3.28791 | gap 1, opp_overlap 4838343 4838344 4838348 ACTCTTCGTCGATAA CTGCTTGATAACC TTC GGC-ATCAAGCAG GTTGTCAATTTCAGC Swoo_3968 4838716 - 4838327 - | glycine cleavage system H protein TERM 4953 4838797 - 4838818 + r 73 -7.3 -4.06805 | TATGGCTTATATCAG TTTTTGCGC TTAA GCGCAGGAA TTTCGTTCTAATTTT Swoo_3969 4840163 - 4839069 - | glycine cleavage system T protein TERM 4954 4840486 - 4840461 - R 72 -5.6 -4.68424 | gap 1, opp_overlap 4840461 4840464, overlap 4840453 4840462 4840464 CAACCTACTGAAAAA TC-AGGCTTAT TATCC ATAAGCCTAGA TTCTGTTTATTGAGC TERM 4955 4840508 - 4840524 + r 74 -5.8 -4.64676 | TTATTGAGCTTTACA CAGGTC CGGAA GGCCTG TTTTGTTGCCCATGG Swoo_3970 4841707 - 4840493 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Swoo_3971 4842231 - 4841839 - | hypothetical protein Swoo_3972 4843576 - 4842326 - | 2-polyprenyl-6-methoxyphenol 4-hydroxylase Swoo_3973 4844240 - 4843674 - | yecA family protein TERM 4956 4844324 - 4844308 - H 72 -5 -4.70772 | ATACAGCCAAGAAAA CCCAGC ATATG GCAGGG CTAACATCCACAAAT Swoo_3974 4844576 - 4844884 + | hypothetical protein TERM 4957 4845167 - 4845188 + F 100 -8.1 -5.76633 | opp_overlap 4845167, overlap 4845159 TATTTTATGGAGAAA CCATTGTTA GCAA TAACAGTGG TTTTTTTATGTCTGA TERM 4958 4845324 - 4845345 + F 85 -5.9 -5.4251 | opp_overlap 4845324 AGTAAAAGAGAGAAA CCATTGTTA GCAA TAGCAGTGG TTTTTTATGTCTGAA TERM 4959 4845479 - 4845500 + F 85 -5.9 -5.4251 | opp_overlap 4845479 TCGAACAGCAAATTA GCCATCA CATAACCC TGATGGC TTTTTTGTATCTGAA Swoo_3975 4845680 - 4846453 + | MltA-interacting MipA family protein Swoo_3976 4846465 - 4846920 + | hypothetical protein TERM 4960 4846946 - 4846964 + T 100 -13.2 -4.45771 | opp_overlap 4846946 CTGCATTGAATATAA GCGCCTTA CTT TAAGGCGC TTTCTCTTTTACAAT TERM 4961 4846964 - 4846946 - T 100 -13.2 -3.68988 | opp_overlap 4846946 CTGCATTGAATATAA GCGCCTTA CTT TAAGGCGC TTTCTCTTTTACAAT Swoo_3977 4848307 - 4847006 - | integral membrane sensor signal transduction histidine kinase TERM 4962 4848063 - 4848077 + g 71 -8.6 -3.55368 | ATAAACTCTGTTTCG GCTATC AGT GATAGC TTCTCTGAGTTGGAT Swoo_3978 4849008 - 4848304 - | two component transcriptional regulator Swoo_3979 4849400 - 4849011 - | hypothetical protein Swoo_3980 4850277 - 4849408 - | MltA-interacting MipA family protein Swoo_3981 4851201 - 4850488 - | hypothetical protein Swoo_3982 4851704 - 4851186 - | ECF subfamily RNA polymerase sigma-24 factor Swoo_3983 4852369 - 4851773 - | YceI family protein TERM 4963 4851942 - 4851918 - G 80 -10.7 -3.36569 | opp_overlap 4851924 4851938, overlap 4851916 GTAAGCGTGGAAACA TGAAGTGCGCC ATC GGCACTCTTCA CTAGCTGAAGTTCTG TERM 4964 4852421 - 4852442 + H 80 -5.9 -5.055 | overlap 4852423 AACAAGCTCTCTGAG TGGATGCAG ATGA TTGCATCTA TTTTTTAAGGCTTAA Swoo_3984 4852545 - 4853168 + | 5-formyltetrahydrofolate cyclo-ligase Swoo_3985 4853953 - 4853165 - | hypothetical protein TERM 4965 4853343 - 4853319 - G 83 -11.5 -3.29511 | overlap 4853328 GGGATCTGCTTAGAA GCACCGAAATG AAA CACTTCAGTGC TCAGTGGCACCCCCA TERM 4966 4854212 - 4854200 - g 73 -4.8 -4.6644 | AAGAGAGTGTAAAAA GCGA AGAGA TCGC GCCCCCTATCGCTGT Swoo_3986 4854091 - 4854567 + | copper resistance lipoprotein NlpE TERM 4967 4854613 - 4854634 + T 79 -8.7 -4.1891 | opp_overlap 4854613 4854614 4854629, overlap 4854614 TCAAAATGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 4968 4854634 - 4854613 - T 79 -8.7 -4.08307 | opp_overlap 4854613 4854614, overlap 4854614 4854629 TCAAAATGTAAAGAA TCCACCTTC TGAA GAAGGTGGC TTTGTATTAGCCCCC TERM 4969 4854633 - 4854614 - T 87 -12.2 -3.03899 | opp_overlap 4854613 4854614, overlap 4854613 4854629 CAAAATGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 4970 4854614 - 4854633 + T 87 -12.2 -3.11024 | opp_overlap 4854614 4854613 4854629, overlap 4854613 CAAAATGTAAAGAAT CCACCTTC TGAA GAAGGTGG CTTTGTATTAGCCCC TERM 4971 4854643 - 4854661 + T 80 -10.2 -3.60214 | opp_overlap 4854629, overlap 4854644 AGGTGGCTTTGTATT AGCCCCCT AAA AGGGGGCG TTATCTACTTCAAAT TERM 4972 4854644 - 4854660 + T 93 -13.7 -2.75647 | opp_overlap 4854629, overlap 4854643 GGTGGCTTTGTATTA GCCCCCT AAA AGGGGGC GTTATCTACTTCAAA Swoo_3987 4855100 - 4854666 - | transposase IS200-family protein TERM 4973 4855203 - 4855184 - R 90 -12.2 -3.44319 | opp_overlap 4855184 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 4974 4855184 - 4855203 + r 90 -12.2 -3.57263 | opp_overlap 4855184 CCTAATTGATGATAA CCACCTAC TGAA GTAGGTGG TTTAGGGCTGAAAAT TERM 4975 4855219 - 4855244 + r 76 -10.5 -2.87931 | opp_overlap 4855224, overlap 4855224 TTTAGGGCTGAAAAT AAAAAGGAGCC ATAG GGCTCCTTTTC TATCTGACCACTAAA TERM 4976 4855239 - 4855224 - R 100 -10.4 -5.45802 | opp_overlap 4855219 4855224 GGCTGAAAATAAAAA GGAGCC ATAG GGCTCC TTTTCTATCTGACCA TERM 4977 4855224 - 4855239 + r 89 -10.4 -4.60797 | opp_overlap 4855224, overlap 4855219 GGCTGAAAATAAAAA GGAGCC ATAG GGCTCC TTTTCTATCTGACCA Swoo_3988 4855923 - 4855255 - | uracil-DNA glycosylase Swoo_3989 4856040 - 4856603 + | pilin, putative Swoo_3990 4856688 - 4857017 + | hypothetical protein TERM 4978 4857058 - 4857037 - T 86 -10.2 -4.20516 | TTTTGAGCTAAGAAA GTTGCGAG TTAACG CTCGCAAC TCGAAACTTACAACT Swoo_3991 4857686 - 4857072 - | lysine exporter protein LysE/YggA TERM 4979 4857838 - 4857819 - R 100 -13.6 -5.50723 | opp_overlap 4857819 4857814 CGATGAAAATAAAAA GCCCGAAC ACTT GTTCGGGC TCTGATTTATCGTTT TERM 4980 4857819 - 4857838 + r 95 -13.6 -3.09128 | opp_overlap 4857819, overlap 4857814 CGATGAAAATAAAAA GCCCGAAC ACTT GTTCGGGC TCTGATTTATCGTTT Swoo_3992 4860542 - 4857909 - | TonB-dependent receptor plug TERM 4981 4858488 - 4858506 + g 74 -9.6 -3.3164 | AACATTAGGTACACC GGCAGCTT TCA AAGTTGCC TTATCAGCATCAGTT TERM 4982 4861723 - 4861740 + G 75 -4.9 -4.77036 | CCGCTTTCTCAGCTG GTTTACT GGAG AGTGAAC TTTTTGGTCATGAAA Swoo_3993 4861005 - 4862465 + | Fis family transcriptional regulator TERM 4983 4863040 - 4863052 + G 75 -4.8 -4.86731 | TGGGTCTTTATTGCC GCAG CCTTT CTGC TTTTCTTTACCACAG TERM 4984 4863933 - 4863920 - g 71 -4.5 -4.7268 | AAATACGCAATAAAA CCCAG CAAA CTAGG CAATATCGACTCTCA Swoo_3994 4862659 - 4864149 + | cytochrome c oxidase accessory protein CcoG TERM 4985 4864163 - 4864183 + F 75 -9.8 -2.97667 | overlap 4864160 AGCTCGCTACCATCA TGGGGTTA CACGC TAACCCCA TACTTTGCTAAATAA Swoo_3995 4864411 - 4866024 + | AMP-dependent synthetase and ligase Swoo_3996 4866281 - 4866550 + | hypothetical protein TERM 4986 4866595 - 4866568 - T 72 -9.2 -2.77522 | opp_overlap 4866567 4866564 4866574, overlap 4866567 4866570 AGACCCTTCAAGAAT TAGCCAGCCTTC GAAT GAAGGCTGATTA CACTTCTTCGTGTTA Swoo_3997 4867554 - 4866769 - | AraC family transcriptional regulator Swoo_3998 4867648 - 4868454 + | hypothetical protein TERM 4987 4868766 - 4868782 + F 81 -9.5 -3.92996 | ATTTGGTGTTGTGTT TGAAGGT TGT ACCTTCA TTGTTATCTATCGCC Swoo_4000 4869297 - 4869845 + | hypothetical protein Swoo_4001 4872166 - 4870313 - | lipid ABC transporter ATPase/inner membrane protein TERM 4988 4871155 - 4871169 + g 77 -11.4 -2.70017 | opp_overlap 4871149, overlap 4871154 4871152 GTTCAATCAGGCGCT CGGCTG CAC CAGCCG CTCTTTGAATTTCAC TERM 4989 4872213 - 4872240 + r 100 -17.2 -4.03413 | opp_overlap 4872194 4872213 4872218, overlap 4872218 GTTTTACTAGAATAA CAAAACCCACGT ATGA ACGTGGGTTTTG TTTGTATCAGAAGGT TERM 4990 4872240 - 4872213 - R 100 -17.2 -3.84406 | opp_overlap 4872213 4872218, overlap 4872194 4872218 GTTTTACTAGAATAA CAAAACCCACGT ATGA ACGTGGGTTTTG TTTGTATCAGAAGGT TERM 4991 4872218 - 4872235 + r 93 -11.3 -5.05113 | opp_overlap 4872194 4872213 4872218, overlap 4872213 ACTAGAATAACAAAA CCCACGT ATGA ACGTGGG TTTTGTTTGTATCAG TERM 4992 4872235 - 4872218 - R 93 -11.3 -4.9645 | opp_overlap 4872218 4872213, overlap 4872194 4872213 ACTAGAATAACAAAA CCCACGT ATGA ACGTGGG TTTTGTTTGTATCAG Swoo_4002 4872854 - 4872261 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 4993 4872300 - 4872329 + g 77 -11.5 -2.79327 | gap 1, overlap 4872299 AAACTCAGACTTGGC TGGA-GCGCCATGG TGG CCATCGCGCTTCCA ATTTACATCAAGTAG Swoo_4003 4873390 - 4872884 - | hypothetical protein TERM 4994 4873449 - 4873418 - R 100 -14.5 -4.35524 | overlap 4873419 TTTTTAAAGCTAAAA CCGACGAGCAAGG CCTGAC CCTTGCTCGCCGA TCCGCTCTTGTAAAC TERM 4995 4873448 - 4873419 - R 100 -15.8 -3.20832 | overlap 4873418 TTTTAAAGCTAAAAC CGACGAGCAAGG CCTGAC CCTTGCTCGCCG ATCCGCTCTTGTAAA Swoo_4004 4875532 - 4873487 - | TonB-dependent heme/hemoglobin receptor family protein TERM 4996 4875807 - 4875783 - g 90 -10.7 -4.42238 | overlap 4875791 GCATCTCAAGGAAAA CCACCACAGCT CCC AGCTGGGGTAG CGATGGGTTCACTCC TERM 4997 4876307 - 4876293 - g 73 -10 -3.00476 | ATGTTTAATCAGATA GGAGAG CAA CTCTCC CTCACCTTGATCAAC Swoo_4005 4875705 - 4876451 + | TonB family protein Swoo_4006 4876490 - 4877224 + | MotA/TolQ/ExbB proton channel Swoo_4007 4877221 - 4877634 + | biopolymer transport protein ExbD/TolR TERM 4998 4877652 - 4877618 - f 76 -8.7 -3.78902 | overlap 4877613 TAACCAATACTCAAA TTTTGATGGAACAGT AACCA ACAGTTCCATCAACA CATCTATCGATTTGG Swoo_4008 4877677 - 4878591 + | periplasmic binding protein Swoo_4009 4878633 - 4879649 + | transport system permease protein Swoo_4010 4879662 - 4880426 + | ABC transporter related Swoo_4011 4880722 - 4882023 + | phage integrase family protein TERM 4999 4882693 - 4882677 - g 77 -5.1 -4.9792 | TACGTCAGATAAAAA TGTGCGA CTT TCGAACA AAAGGCGATAGCTTA TERM 5000 4883265 - 4883255 - g 74 -6.8 -4.3586 | opp_overlap 4883255 GGAGTTACACCAAAA GCTG TAG CAGC TTATATTGATATAAC Swoo_4012 4882010 - 4883689 + | hypothetical protein TERM 5001 4885667 - 4885690 + G 77 -11.2 -2.56596 | opp_overlap 4885664 4885663 4885667 4885671, overlap 4885671 ATGGTATAGAACGCA CAAAGCAAAT ACCG ATTTGCTTTG TCAATTAATCGAAAC TERM 5002 4885690 - 4885667 - g 77 -11.2 -2.63257 | opp_overlap 4885667 4885671, overlap 4885664 4885663 4885671 ATGGTATAGAACGCA CAAAGCAAAT ACCG ATTTGCTTTG TCAATTAATCGAAAC Swoo_4013 4883679 - 4885934 + | hypothetical protein Swoo_4014 4885938 - 4886345 + | hypothetical protein Swoo_4015 4886745 - 4886407 - | hypothetical protein TERM 5003 4886890 - 4886880 - R 73 -6.8 -4.24606 | opp_overlap 4886879 4886880 AACGGAGAGTTAAAA GTCG AGA CGAC CTTTTCTCTAAAGCC Swoo_4016 4888270 - 4886861 - | type III restriction protein res subunit TERM 5004 4887182 - 4887194 + g 87 -7.7 -4.94672 | opp_overlap 4887182 4887181 GGCAAAGGTGTAAAG CCAAG CAT CTTGG TTTTTAGTCTTGTTT Swoo_4017 4888803 - 4888276 - | hypothetical protein TERM 5005 4888590 - 4888606 + g 76 -3.7 -5.14563 | opp_overlap 4888584, overlap 4888584 GGTACGTAACACCTT TGGAGTT TTT AGTTCCA TTTTTTAGTAACCCC TERM 5006 4888830 - 4888844 + H 81 -10 -3.80733 | opp_overlap 4888821 AAGGGACTGCTAGTA GGACTC GTA GAGTCC TTATTATCAAATGCG Swoo_4018 4888924 - 4889130 + | XRE family transcriptional regulator Swoo_4019 4889329 - 4889889 + | hypothetical protein TERM 5007 4889947 - 4889909 - f 100 -14.8 -3.11459 | opp_overlap 4889905, overlap 4889896 AACAGGACTAGCGAA GCTCCTGGGCATTTTAAA CAA CTTAAAATGCCTAGGAAC TAAAACTTTTTAATC Swoo_4020 4890009 - 4890926 + | beta-lactamase domain-containing protein TERM 5008 4891408 - 4891426 + G 72 -8.8 -3.6292 | opp_overlap 4891407 4891406, overlap 4891409 4891423 AGATTATGACAAAGG CGCAGCTG GCG CAGCTGCC TTTAAAGGTATTTCT TERM 5009 4891409 - 4891425 + G 82 -12.3 -2.77029 | opp_overlap 4891407 4891406, overlap 4891408 4891423 GATTATGACAAAGGC GCAGCTG GCG CAGCTGC CTTTAAAGGTATTTC Swoo_4021 4890923 - 4892398 + | hypothetical protein TERM 5010 4893414 - 4893397 - g 83 -2.7 -5.51612 | opp_overlap 4893397 AGATAAAAAACAAAA TAATCGA ACTT TCGCTTA GTTTATCTTGGATTA TERM 5011 4893664 - 4893632 - g 82 -10.2 -4.08307 | gap 1, opp_overlap 4893632 4893636 4893640 TGAAAAGTCAAATAA GCATTTTTTAGAGAA GCAA TTCTCTA-AAAATGC TTCTCCATTTATGCA TERM 5012 4893632 - 4893664 + G 77 -10.2 -3.50047 | gap 1, opp_overlap 4893632, overlap 4893636 4893640 TGAAAAGTCAAATAA GCATTTTTTAGAGAA GCAA TTCTCTA-AAAATGC TTCTCCATTTATGCA TERM 5013 4893636 - 4893661 + G 75 -10.7 -2.88398 | opp_overlap 4893632, overlap 4893632 4893640 AAGTCAAATAAGCAT TTTTTAGAGAA GCAA TTCTCTAAAAA TGCTTCTCCATTTAT TERM 5014 4893860 - 4893838 - g 72 -3.4 -4.88786 | ATGAAAACAAAGAAA GCTCGCTAAA ACT CTTAGAAAGC ATCGTGGACATGAAT TERM 5015 4894004 - 4893988 - g 71 -5.1 -4.50259 | overlap 4893990 AAAAAGACAGCAAAA TACTAGG CTA CCTAGAA AAAGCTATTAAGTTA TERM 5016 4894002 - 4893990 - g 71 -7.7 -3.82503 | overlap 4893988 AAAGACAGCAAAATA CTAGG CTA CCTAG AAAAAGCTATTAAGT Swoo_4022 4892391 - 4894955 + | hypothetical protein Swoo_4023 4895256 - 4895516 + | hypothetical protein Swoo_4024 4896438 - 4895590 - | Ion transport protein Swoo_4025 4896894 - 4896604 - | hypothetical protein Swoo_4026 4897914 - 4897114 - | hydantoin racemase Swoo_4027 4899583 - 4897907 - | 5-oxoprolinase (ATP-hydrolyzing) Swoo_4028 4901711 - 4899576 - | 5-oxoprolinase (ATP-hydrolyzing) Swoo_4029 4902202 - 4901708 - | hypothetical protein Swoo_4030 4904403 - 4902205 - | TonB-dependent receptor TERM 5017 4904517 - 4904532 + H 76 -9 -3.73647 | opp_overlap 4904516 4904517 ACACAAAGTGGAAAC CTACCC TATT GGGTAG TTCTTAATGGGTAAG Swoo_4031 4904610 - 4907300 + | ATP-dependent transcription regulator LuxR Swoo_4032 4907416 - 4908144 + | membrane-flanked domain-containing protein TERM 5018 4908468 - 4908454 - g 75 -8.6 -3.84985 | opp_overlap 4908451 CAGTAAAATACAGAA TGTTCG TCT CGAACA ACCTCTCTACTTCAG Swoo_4033 4908146 - 4909690 + | membrane-flanked domain-containing protein Swoo_4034 4909750 - 4910328 + | hypothetical protein Swoo_4035 4910691 - 4910503 - | hypothetical protein Swoo_4036 4911298 - 4910723 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Swoo_4037 4913086 - 4911410 - | AMP-dependent synthetase and ligase TERM 5019 4914356 - 4914305 - g 74 -11 -2.71712 | gap 1, overlap 4914304 GGCGTGGCTGGAAAG GCTTGCACAGCACCAGCTTAATTGA CCG CCATTCAAGCTGGCG-TATGCGAGC TAATGAACTACCAAA Swoo_4038 4913254 - 4914768 + | amidase Swoo_4039 4914845 - 4917121 + | TonB-dependent receptor TERM 5020 4917159 - 4917183 + T 85 -2.9 -5.69379 | opp_overlap 4917149 4917159 CCAAACAGTATTAAA TACCGTTAA GCAGTAA TTTACGGTA TTTTTTTAGTTATAT Swoo_4040 4918313 - 4917240 - | regulatory protein Swoo_4041 4918504 - 4918956 + | MarR family transcriptional regulator Swoo_4042 4919996 - 4919151 - | hypothetical protein Swoo_4043 4920672 - 4919989 - | hypothetical protein TERM 5021 4920044 - 4920060 + g 71 -4.4 -4.72497 | opp_overlap 4920036 CTAGCAACCACTTTC GCGGTT CGCTC AATCGC TTTTATTGCTCCATC Swoo_4044 4921782 - 4920676 - | 3-oxoacyl-(ACP) synthase III TERM 5022 4921085 - 4921102 + g 73 -4.9 -4.59773 | gap 1, overlap 4921073 TACGTTGGAAAGTCT TGCCAGCT TTT AG-TGGCA TTTTTAGGCATCCCC Swoo_4045 4922345 - 4921779 - | diguanylate cyclase/phosphodiesterase Swoo_4046 4923360 - 4922491 - | AraC family transcriptional regulator Swoo_4047 4923827 - 4923501 - | hypothetical protein TERM 5023 4924218 - 4924208 - g 77 -3.2 -5.24531 | ATTTTGGAGAAAAAA GAAC ATA GCTC CGAGAAAGGCATATT Swoo_4048 4924001 - 4924693 + | HxlR family transcriptional regulator Swoo_4049 4925161 - 4924757 - | carboxymuconolactone decarboxylase TERM 5024 4925218 - 4925201 - R 70 -8.5 -3.35706 | opp_overlap 4925204 4925207, overlap 4925205 AAGGAGACCTTACAA CTTAGAG TTAA CTCTAAG TCAACTCACTTTATT Swoo_4050 4925587 - 4925219 - | MerR family transcriptional regulator Swoo_4051 4926054 - 4925713 - | hypothetical protein Swoo_4052 4926766 - 4926278 - | AIG2 family protein Swoo_4053 4927154 - 4926810 - | putative transcriptional regulator, Fis family protein Swoo_4054 4927657 - 4927199 - | hypothetical protein TERM 5025 4927814 - 4927791 - R 100 -9.6 -6.09196 | opp_overlap 4927791 TCGAAAACAAAAAAA GAGGCTAGCC TGGA GACTAACCTC TCTGTCTAACATATC Swoo_4055 4928932 - 4927880 - | NADH:flavin oxidoreductase/NADH oxidase TERM 5026 4928946 - 4928965 + H 70 -8 -3.63464 | overlap 4928944 4928945 4928947 ATAGCGACCTCTGTT TCTTGAAT GTTC ATTCAAGA TATTCTTATTTGAAC TERM 5027 4928947 - 4928991 + H 73 -8.2 -3.68435 | gap 1, overlap 4928946 4928944 4928945 TAGCGACCTCTGTTT CTTGAATGTTCATTCAAGATA TTCT TAT-TTGAACGATCATTCAAG TATTATTTTGAACAA TERM 5028 4929179 - 4929165 - g 72 -8.6 -3.56972 | opp_overlap 4929164 4929165, overlap 4929161 ATCTGACCAAAGCAA CTGGAT TAC ATCCAG GTTCTATCTACTGTG Swoo_4056 4929059 - 4929640 + | TetR family transcriptional regulator TERM 5029 4929729 - 4929715 - f 72 -8.6 -3.3353 | TGCTTGATAAATAGA GATGAC AGG GTCATC AGCAAGATAAGCACA Swoo_4057 4929802 - 4930092 + | hypothetical protein TERM 5030 4930929 - 4930912 - g 81 -9.9 -4.12066 | overlap 4930904 GATAAAACACAACAA GGCCTTA GTAT TAAGGCC AATTGAGGGGGAGAA Swoo_4058 4930202 - 4931038 + | LysR family transcriptional regulator Swoo_4059 4931554 - 4931111 - | UspA domain-containing protein TERM 5031 4931345 - 4931360 + g 74 -7.6 -4.24948 | GGCTAATTTAGTGAG CTTCTC TTTA GAGAAG TTTTCCATCTCATCC Swoo_4060 4932061 - 4931630 - | UspA domain-containing protein TERM 5032 4931771 - 4931753 - G 70 -7.4 -3.93038 | CATTCCAACATCAAA CTCAACCG CAT CGGCTAAG ATCTCCTCAATGGGA TERM 5033 4932039 - 4932029 - G 70 -6.8 -4.07568 | opp_overlap 4932037, overlap 4932030 TGCTGTTTCGGAAAA GTCC GTT GGAC AGAGTATTTGTCTGG Swoo_4061 4932539 - 4933006 + | putative lipoprotein Swoo_4062 4933081 - 4933998 + | hypothetical protein TERM 5034 4934593 - 4934568 - g 70 -10.4 -2.66435 | opp_overlap 4934571 AGCCCGACTACAGTA TCGCCAGTGC CTGGTT GCTCTGGCGA GGTGAAGAGCGACTC Swoo_4063 4933985 - 4934791 + | hypothetical protein Swoo_4064 4935000 - 4936439 + | aldehyde dehydrogenase TERM 5035 4936834 - 4936808 - g 70 -6.6 -4.07885 | opp_overlap 4936801 4936808 4936814 4936816 CATTTTCCCTCAAAA GATGAGTTGATG AAC CATCTATTCATC TCCATTAAGCAGGAG Swoo_4065 4936661 - 4937242 + | TetR family transcriptional regulator TERM 5036 4937311 - 4937279 - T 100 -18.7 -3.48766 | opp_overlap 4937276 4937275 4937272, overlap 4937282 CGGATAACGGAAATA TAATCGTGCCTCACT AAC AATGAGGCACGATTA AGAATTACTCCTTCT TERM 5037 4937308 - 4937282 - T 100 -16 -3.86975 | opp_overlap 4937276 4937275 4937272, overlap 4937279 ATAACGGAAATATAA TCGTGCCTCACT AAC AATGAGGCACGA TTAAGAATTACTCCT Swoo_4066 4937537 - 4937316 - | hypothetical protein TERM 5038 4937359 - 4937369 + g 71 -4.6 -4.64861 | TCTTTTTTACCACCT GGGT TAC GCCC TTTCTTTTCAGGGAC Swoo_4067 4938125 - 4937538 - | hypothetical protein TERM 5039 4937564 - 4937576 + g 91 -6.2 -5.44721 | overlap 4937563 TTATTGATGATGGTG CGCG ATTAG CGCG TTTTTTTGGGGTAAT Swoo_4068 4939830 - 4938439 - | integral membrane sensor signal transduction histidine kinase Swoo_4069 4941306 - 4939849 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 5040 4939972 - 4939982 + g 72 -5.4 -4.46155 | TTCTATCTCACTTTT CTCA AGC TGAG TTTTATCGGTCTCTG Swoo_4070 4942654 - 4941440 - | hypothetical protein Swoo_4071 4943981 - 4942680 - | hypothetical protein Swoo_4072 4944754 - 4943993 - | ABC transporter related Swoo_4073 4945160 - 4944864 - | hypothetical protein Swoo_4074 4946433 - 4945171 - | RND family efflux transporter MFP subunit Swoo_4075 4947253 - 4946768 - | protein of unknown function DUF395 YeeE/YedE Swoo_4076 4947730 - 4947299 - | protein of unknown function DUF395 YeeE/YedE Swoo_4077 4949373 - 4947727 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 5041 4949477 - 4949452 - R 81 -3.3 -5.52384 | overlap 4949428 4949426 TTTTTATTAAAAAAA TCTAATGTAAC AGTT GTAACATAAGA AAAACTAAAGGATTC TERM 5042 4949637 - 4949668 + r 78 -9.6 -3.60296 | gap 1, opp_overlap 4949631, overlap 4949638 TGTAGCTAAGCTCGC AGCTA-GAGTTTCGA AAC TCGAAACTCTTAGCC TTTAACCTCCAACTA TERM 5043 4949638 - 4949667 + r 93 -13.1 -2.75963 | gap 1, opp_overlap 4949631, overlap 4949637 GTAGCTAAGCTCGCA GCTA-GAGTTTCGA AAC TCGAAACTCTTAGC CTTTAACCTCCAACT Swoo_4078 4950064 - 4949681 - | hypothetical protein TERM 5044 4950215 - 4950176 - R 80 -10.2 -3.64703 | gap 1, opp_overlap 4950175 4950171 4950176, overlap 4950158 4950177 GGCTCCTGAGGTAAA CTCAGTATGACGGCATCAA CAC CTGA-GCCGTCATAGTGAA CTTTGCTGTTGCTAA TERM 5045 4950214 - 4950177 - R 81 -11.5 -2.78679 | gap 1, opp_overlap 4950176 4950175 4950171, overlap 4950158 4950176 GCTCCTGAGGTAAAC TCAGTATGACGGCATCAA CAC CTGA-GCCGTCATAGTGA ACTTTGCTGTTGCTA Swoo_4079 4951125 - 4950295 - | periplasmic binding protein TERM 5046 4951643 - 4951594 - R 91 -13 -3.13164 | gap 1 TGGCTAAGCAGTCAA GCTGGCTCAGCCCCTGAGCATAC GACTA GTATG-TGATGGGGTGAGCCAGC GTAGACAATAACGCC Swoo_4080 4952332 - 4951682 - | cob(I)alamin adenosyltransferase Swoo_4081 4953975 - 4952392 - | cobyric acid synthase CobQ Swoo_4082 4954523 - 4953981 - | cobalbumin biosynthesis protein Swoo_4083 4955293 - 4954520 - | cobalamin 5'-phosphate synthase Swoo_4084 4956440 - 4955400 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Swoo_4085 4957682 - 4956645 - | transport system permease protein Swoo_4086 4958505 - 4957666 - | ABC transporter related TERM 5047 4958649 - 4958667 + r 81 -6.7 -5.00616 | CATTTGAAACGCCCC CTCGAGT TACCC GCTCGAG TTTTTTAGCGACAAA Swoo_4087 4959669 - 4959022 - | phosphoglycerate mutase TERM 5048 4962280 - 4962263 - g 74 -3.3 -5.14563 | CGCGTGATGAAAAAA GCTGTGG CTTA CCTCAAC CCTTACATCGAGCTT TERM 5049 4962775 - 4962761 - g 72 -5.6 -4.58395 | overlap 4962762 GTGATGCGTGAAAAA CGCCTG TCA CAGGCT AAACGTAAAATGATC TERM 5050 4962774 - 4962762 - g 71 -9.1 -3.34716 | overlap 4962761 TGATGCGTGAAAAAC GCCTG TCA CAGGC TAAACGTAAAATGAT Swoo_4088 4960016 - 4963771 + | methionine synthase TERM 5051 4964047 - 4964019 - f 74 -9 -3.55444 | opp_overlap 4964024, overlap 4964024 CGCTCATGCCTCAAA CTAAAGACATGT TATTG ACATGTCTTTTG CTCTTCAAGCACCTT TERM 5052 4964042 - 4964024 - f 75 -7.5 -4.06055 | opp_overlap 4964024, overlap 4964019 ATGCCTCAAACTAAA GACATGT TATTG ACATGTC TTTTGCTCTTCAAGC TERM 5053 4964024 - 4964042 + F 83 -8.2 -4.4261 | opp_overlap 4964024 4964019 ATGCCTCAAACTAAA GACATGTT ATT GACATGTC TTTTGCTCTTCAAGC Swoo_4089 4964137 - 4964769 + | hypothetical protein TERM 5054 4966569 - 4966553 - g 70 -3 -4.93696 | TCCAAACAGTAAAAA GTATGT CACTT ACACAC TTTCAAATGCGAATT Swoo_4090 4966140 - 4968050 + | hypothetical protein TERM 5055 4968090 - 4968067 - f 74 -6.1 -4.65895 | gap 1, opp_overlap 4968072, overlap 4968072 CTCCCCACTTAAAAA TATAAGGCCG AAAAA CGGCCTT-TA ACTCAATTAGCTTAT TERM 5056 4968072 - 4968086 + F 73 -8.5 -3.68619 | opp_overlap 4968067 4968072 CACTTAAAAATATAA GGCCG AAAAA CGGCC TTTAACTCAATTAGC TERM 5057 4968086 - 4968072 - f 79 -8.5 -4.09353 | opp_overlap 4968072, overlap 4968067 CACTTAAAAATATAA GGCCG AAAAA CGGCC TTTAACTCAATTAGC Swoo_4091 4968117 - 4969322 + | hypothetical protein TERM 5058 4969745 - 4969735 - g 72 -5.4 -4.58663 | AGGACGTTTTAAAAA CTGA TGG TCAG GGTAAATTCGCAAAT TERM 5059 4971944 - 4971930 - g 71 -4.3 -4.61873 | TTTCATAAAGTAAAA TTGTC AAACG GACAA GAAGTCGATACACAT TERM 5060 4972237 - 4972227 - g 70 -5.4 -4.39166 | TTTCAGAGAGTAAAA TCGA CCT TCGA TGGAAGTAATACAGT TERM 5061 4973013 - 4972997 - g 73 -5.1 -4.60041 | overlap 4972998 ACTTATCGGGAAAAA GTTCAGC AGC GCTGAAA TTCAACTGGTTTCAT Swoo_4092 4969347 - 4973150 + | YD repeat-containing protein TERM 5062 4973214 - 4973198 - T 88 -6.5 -5.33848 | opp_overlap 4973199, overlap 4973199 ATGACAAGCAAAAAA GGGCACA CTT TGTGCCT TTTATCTTGCCTACA TERM 5063 4973213 - 4973199 - T 81 -10 -3.78682 | opp_overlap 4973199, overlap 4973198 TGACAAGCAAAAAAG GGCACA CTT TGTGCC TTTTATCTTGCCTAC TERM 5064 4973199 - 4973213 + T 89 -10 -4.68724 | opp_overlap 4973199 4973198 TGACAAGCAAAAAAG GGCACA CTT TGTGCC TTTTATCTTGCCTAC Swoo_4093 4973849 - 4973298 - | hypothetical protein Swoo_4094 4974527 - 4973967 - | hypothetical protein Swoo_4095 4976343 - 4974556 - | hypothetical protein TERM 5065 4975722 - 4975737 + g 70 -9 -3.16421 | opp_overlap 4975719 TAGTGTCAGAGAGTG CCTTGG CTAG CCAAGG TTCGGTGGTTATTGG Swoo_4096 4976843 - 4976400 - | hypothetical protein TERM 5066 4977128 - 4977108 - H 72 -5.3 -4.57353 | opp_overlap 4977108, overlap 4977110 TTCGACCATATAAAA GATAGGGGG TCT CCTCCTAGC TTTCTGAAACTTGTT TERM 5067 4977108 - 4977128 + H 74 -7.5 -3.90729 | opp_overlap 4977108 4977110 TTCGACCATATAAAA GATAGGGGG TCT CCTCCTAGC TTTCTGAAACTTGTT Swoo_4097 4977312 - 4978511 + | hypothetical protein Swoo_4098 4978761 - 4979135 + | TM2 domain-containing protein Swoo_4099 4979661 - 4979278 - | glutaredoxin TERM 5068 4979875 - 4979895 + r 70 -8.4 -3.35679 | opp_overlap 4979872 4979871 4979875 TTGAGCCAAAATTTA GTTTAACC ATAGA GGTTAAAC TTATAAATAAACAAC TERM 5069 4980107 - 4980129 + r 86 -12.1 -2.76263 | opp_overlap 4980100, overlap 4980105 GTATTTAATCTTATT GGAGGTCTA CCTTA TAGACCTCC TAATTAAATAATAGA Swoo_4100 4980741 - 4980211 - | hypothetical protein Swoo_4101 4981491 - 4982354 + | hypothetical protein TERM 5070 4982422 - 4982393 - T 72 -9.4 -2.74701 | opp_overlap 4982397, overlap 4982390 4982397 AGATGCTTAATAGTA TCAAGGTGGC TTTCACAATG GCCACCTTGA TAAATCAACAGTCAG Swoo_4102 4983349 - 4982441 - | hypothetical protein TERM 5071 4982596 - 4982614 + g 73 -10.2 -3.05384 | opp_overlap 4982587 4982596 CAATAATAGGCACAA GCAGCTGC AAC GCAGCCGC TTGCATAACCGACAG TERM 5072 4982614 - 4982596 - G 93 -12.4 -3.45032 | opp_overlap 4982596, overlap 4982587 CAATAATAGGCACAA GCAGCTGC AAC GCAGCCGC TTGCATAACCGACAG TERM 5073 4982726 - 4982704 - G 75 -10.6 -2.89361 | opp_overlap 4982704, overlap 4982701 AGACAGCAAAGATGA TCCCAGCTTG AGT CAAGCTGGCA GATTGGATTGTAAGT Swoo_4103 4984619 - 4983411 - | OsmC family protein Swoo_4104 4985030 - 4986982 + | choline/carnitine/betaine transporter TERM 5074 4987021 - 4987051 + T 79 -10.5 -3.32844 | CAGTAACACCTAGCT TATGCCCGTAGTA ATCTC TTCTGCGGGCATA TTATCCCCTCCGCAA Swoo_4105 4987635 - 4987165 - | BLUF domain-containing protein Swoo_4106 4987873 - 4988604 + | ABC transporter related TERM 5075 4988826 - 4988798 - g 76 -6.2 -4.48175 | gap 2, opp_overlap 4988804, overlap 4988799 4988802 AAAACGCAATTAAAA GC-TA-TAGCTCTG TCA CAGAGCTATTAAGC CAACAAGCTAAATGG TERM 5076 4988820 - 4988802 - g 79 -11.8 -2.80479 | opp_overlap 4988804, overlap 4988799 4988798 CGCAATTAAAAGCTA TAGCTCTG TCA CAGAGCTA TTAAGCCAACAAGCT TERM 5077 4988804 - 4988818 + G 73 -10 -3.01712 | opp_overlap 4988802 4988799 4988798 CAATTAAAAGCTATA GCTCTG TCA CAGAGC TATTAAGCCAACAAG Swoo_4107 4988653 - 4991175 + | hypothetical protein TERM 5078 4991707 - 4991671 - g 72 -9.6 -3.18264 | gap 1 TTGCGGATGTATCAA CAGCGCCACTTACC-AT AAAA ATCGATAACTGGCGCTG GATAGGCACAGGCGA Swoo_4108 4991175 - 4992347 + | hypothetical protein TERM 5079 4992906 - 4992896 - g 76 -4 -5.10064 | overlap 4992897 4992898 GGCAAGACACAAAAA TCTA TCT TAGA TAACGTCGAAGCGAT Swoo_4109 4992737 - 4992988 + | NapD family protein TERM 5080 4994419 - 4994409 - g 72 -5.4 -4.49311 | opp_overlap 4994409 AGCACTATCAGAAAA GTTG TGG CAAC TTCCTGAAGGCACCA Swoo_4110 4993078 - 4995558 + | periplasmic nitrate reductase, large subunit Swoo_4111 4995585 - 4996013 + | nitrate reductase cytochrome c-type subunit (NapB) TERM 5081 4996034 - 4996063 + F 100 -15.3 -4.10657 | opp_overlap 4996036 4996041, overlap 4996041 AGAGTAAACTGTTAA TATAAAACCACCT TTTC AGGTGGTTTTATA TTTTCCCGACTCTAG TERM 5082 4996061 - 4996036 - f 95 -13.5 -3.08327 | opp_overlap 4996034 4996041, overlap 4996041 AGTAAACTGTTAATA TAAAACCACCT TTTC AGGTGGTTTTA TATTTTCCCGACTCT TERM 5083 4996056 - 4996041 - f 86 -9 -4.66938 | opp_overlap 4996034 4996041, overlap 4996036 ACTGTTAATATAAAA CCACCT TTTC AGGTGG TTTTATATTTTCCCG TERM 5084 4996041 - 4996056 + F 91 -9 -4.89567 | opp_overlap 4996041 4996036, overlap 4996034 ACTGTTAATATAAAA CCACCT TTTC AGGTGG TTTTATATTTTCCCG TERM 5085 4997666 - 4997651 - g 70 -9 -3.24365 | overlap 4997641 4997660 TGAGAGCCTACAACA GGCCAA AGAT TTGGCC ACTGAAGCAGCCATA Swoo_4112 4996206 - 4997822 + | hydantoinase/oxoprolinase Swoo_4113 4997819 - 4998901 + | hypothetical protein TERM 5086 5000920 - 5000910 - g 70 -5.4 -4.42653 | ACTCTACGGAGAAAA CATC ACC GATG AGTACAGCACAACCA Swoo_4114 4998925 - 5001036 + | TonB-dependent receptor Swoo_4115 5003510 - 5001117 - | ATP-dependent transcription regulator LuxR TERM 5087 5003727 - 5003699 - R 95 -14.1 -3.13475 | opp_overlap 5003701 5003705 5003706 5003716, overlap 5003706 TAATTCGACATTTAA TATAAAACCACCT TTC AGGTGGCTTTATA TTAAGACACCTTGAT TERM 5088 5003701 - 5003725 + r 75 -10.1 -3.02461 | opp_overlap 5003699 5003706, overlap 5003705 5003706 5003716 ATTCGACATTTAATA TAAAACCACCT TTC AGGTGGCTTTA TATTAAGACACCTTG TERM 5089 5003705 - 5003721 + r 71 -6.5 -4.1891 | opp_overlap 5003699 5003706, overlap 5003701 5003706 5003716 GACATTTAATATAAA ACCACCT TTC AGGTGGC TTTATATTAAGACAC TERM 5090 5003706 - 5003720 + r 76 -10 -3.11024 | opp_overlap 5003706 5003699, overlap 5003705 5003701 5003716 ACATTTAATATAAAA CCACCT TTC AGGTGG CTTTATATTAAGACA TERM 5091 5003720 - 5003706 - R 91 -10 -4.69326 | opp_overlap 5003705 5003701 5003706 5003716, overlap 5003699 ACATTTAATATAAAA CCACCT TTC AGGTGG CTTTATATTAAGACA Swoo_4116 5005100 - 5003748 - | hypothetical protein TERM 5092 5005187 - 5005206 + H 77 -6.4 -4.56367 | TTAAAACTATCTGAG CGGGTTTG AGAT CAAGCCTG TTTATTTGTAACCTA TERM 5093 5005662 - 5005651 - g 71 -4.4 -4.65838 | opp_overlap 5005651 GAGAGAGGCGAAAAA GAGT CCGC ACTC TGCTTTATTCGTTTA Swoo_4117 5005264 - 5006289 + | AraC family transcriptional regulator Swoo_4118 5006414 - 5006674 + | hypothetical protein Swoo_4119 5008399 - 5006768 - | diguanylate cyclase with PAS/PAC sensor Swoo_4120 5008811 - 5008386 - | hypothetical protein Swoo_4121 5010121 - 5008808 - | hypothetical protein TERM 5094 5010332 - 5010303 - R 100 -9.4 -5.79595 | gap 1, opp_overlap 5010303 GCTGAAAACAAAAAA GCAGCGA-TGAGA AGGTA TCTCAACCGCTGC TTCCATTTAGTCAGC Swoo_4122 5011736 - 5010357 - | alpha-L-glutamate ligase TERM 5095 5011223 - 5011246 + g 70 -6.8 -4.08692 | opp_overlap 5011222 5011242, overlap 5011225 GGTTACTGTATAAGT TTGGATTACT TGCC AGTAATCCTA TTTTAAGACCACTTC TERM 5096 5011225 - 5011244 + g 77 -9.4 -3.63922 | opp_overlap 5011222 5011242, overlap 5011223 TTACTGTATAAGTTT GGATTACT TGCC AGTAATCC TATTTTAAGACCACT TERM 5097 5011952 - 5011972 + r 100 -11.3 -5.20534 | opp_overlap 5011952 CTACAGACAAAAAAA TACCTATCA AAG TGATAGGTA TTTTTATTAGTTAAT TERM 5098 5011972 - 5011952 - R 100 -11.3 -5.76633 | opp_overlap 5011952 CTACAGACAAAAAAA TACCTATCA AAG TGATAGGTA TTTTTATTAGTTAAT Swoo_4123 5016602 - 5012046 - | carbamoyl-phosphate synthase L chain ATP-binding TERM 5099 5015124 - 5015143 + g 70 -10 -2.61548 | overlap 5015120 5015119 AGTCAGCTGGTTCAG CTCAGGCC AATC GGCTTGAG TGACTTCTGGTGGCA TERM 5100 5015249 - 5015261 + g 79 -2.6 -5.39755 | opp_overlap 5015234 CGATGTTAAATAACA GCGC CTTAC GTGC TTTTTTGTAGTTCTC TERM 5101 5015617 - 5015631 + g 76 -6.4 -4.57341 | overlap 5015618 AGCTCAGCATGATCC TCTAGC GCC GCTAGG TTTTTAGAGGGACTT TERM 5102 5016511 - 5016484 - G 70 -7 -4.03413 | opp_overlap 5016476 ATCTCTTCAGATAAA CTCTGTTTACTG TGCT CAGGAAACAGTG AAAAGTCTTGTGACA Swoo_4124 5016723 - 5017634 + | LysR family transcriptional regulator TERM 5103 5017703 - 5017683 - T 79 -3.9 -5.43414 | AGCAGATACAAAAAA GACGCAACA AAC TAGTGCGCC TGAGACGAAAATGCC Swoo_4125 5019036 - 5017726 - | hypothetical protein Swoo_4126 5019961 - 5019245 - | hypothetical protein Swoo_4127 5020677 - 5019970 - | peptidase C39 bacteriocin processing TERM 5104 5020716 - 5020699 - R 100 -12.7 -4.62783 | CATTGACCTTAAAAA GGGGGAG TAAA CTCCCCC AAAATTAACCTGAGT Swoo_4128 5021797 - 5020733 - | hypothetical protein Swoo_4129 5022407 - 5021823 - | hypothetical protein TERM 5105 5021857 - 5021884 + g 79 -9.2 -3.95986 | TGCAGTGAGAATCGG TTTATGGCGGTG TTGC CATCGCCAGAAA TTTGATTAAGTTGGA TERM 5106 5022237 - 5022257 + g 100 -14.1 -3.53184 | CAAGGTGACGCTAGG GCCAATGCT GTG AGCATTGGC TTGTACATTTTGATC Swoo_4130 5023913 - 5022573 - | sigma-54 dependent trancsriptional regulator TERM 5107 5024158 - 5024148 - H 75 -3.2 -5.31519 | ACATCTAAATAAAAA GCAT ATA ACGC TGAAAGATTTAGTTA Swoo_4131 5024365 - 5025531 + | hypothetical protein TERM 5108 5025570 - 5025548 - f 76 -9.1 -3.76839 | opp_overlap 5025539 5025546 5025550 CAAGGTGAACCCAAA GGTGCTCGG TTTTT CCGAGCATC GATTAATAGATGAGC TERM 5109 5025550 - 5025568 + G 70 -10.3 -2.57244 | opp_overlap 5025548, overlap 5025539 5025546 AGGTGAACCCAAAGG TGCTCGG TTTTT CCGAGCA TCGATTAATAGATGA TERM 5110 5025837 - 5025823 - g 100 -11.4 -4.82154 | AACTCAGAGGAAAAA GTGCGG GTA CCGCAC ACCTACAACAAAACC Swoo_4132 5025549 - 5026187 + | protein of unknown function DUF335 SprT TERM 5111 5026277 - 5026301 + F 95 -12.9 -3.57263 | opp_overlap 5026274 CTGCCAACAGCAGTT GGAGCCATGGT GCC ACCATCGCTCC TTTAGGGATCAAAAT TERM 5112 5026843 - 5026829 - g 82 -7.8 -4.51196 | TTTAAATCGAGAAAA GCTGAG CCC CCCAGC TATACACGAGGCCAA Swoo_4133 5026316 - 5027071 + | deoxyribonuclease I Swoo_4134 5027080 - 5027811 + | hypothetical protein Swoo_4135 5027878 - 5028828 + | glutathione synthetase Swoo_4136 5028840 - 5030270 + | alkaline phosphatase Swoo_4137 5032828 - 5030348 - | diguanylate cyclase/phosphodiesterase Swoo_4138 5034005 - 5032833 - | hypothetical protein Swoo_4139 5034402 - 5033989 - | hypothetical protein Swoo_4140 5034875 - 5035912 + | rRNA (guanine-N(2)-)-methyltransferase TERM 5113 5035952 - 5035962 + F 77 -6.8 -4.53607 | opp_overlap 5035947 5035946, overlap 5035932 5035947 GCAGCAAAATCCAGT GCCA CTC TGGC TTTTCTCCTGCTTTT TERM 5114 5036033 - 5036054 + F 73 -7.3 -4.08571 | overlap 5036029 ATCACTTTTCAGCTT GTTAAGCCT TCTA AGGCTAAAC TTTATACTGTTATAC TERM 5115 5036404 - 5036381 - g 71 -3.9 -4.85433 | AGATAAACGTAAAAA TTGCCGA AGATAAAATG TCGGCAA AAATGGAGCTAACAG Swoo_4141 5036119 - 5037789 + | hypothetical protein Swoo_4142 5037917 - 5039059 + | peptidase M50 TERM 5116 5039076 - 5039089 + F 91 -9.5 -4.9138 | opp_overlap 5039075 TCTAAATAATATTAG CGCCC TTCG GGGCG TTTTATTTAGCTAAT Swoo_4143 5039440 - 5040471 + | RND family efflux transporter MFP subunit Swoo_4144 5040468 - 5041565 + | RND family efflux transporter MFP subunit TERM 5117 5041611 - 5041597 - g 79 -4.2 -5.26918 | ATACTTCATAAAAAA CAGCGT AAT AAGCTG GATGATGACACTGAT TERM 5118 5041937 - 5041958 + G 76 -8 -4.27686 | opp_overlap 5041930 AAAGAGACTCTACCA CCTGGGGT CAATAC ACCTCAGG TTTTAGATGATTTTG TERM 5119 5042323 - 5042311 - g 71 -7.7 -3.75024 | opp_overlap 5042308 CCTTATCATCAACAA CTCAG GTA CTGAG GGGTTAATATACTTA TERM 5120 5044131 - 5044148 + G 71 -9.9 -3.06492 | overlap 5044133 AATATGAGTCTTCAG GAGATGC ACAA GCATCTC TATTCAGCTCGCTGC TERM 5121 5044573 - 5044585 + G 77 -6.9 -4.48823 | GGTCCTAACATTGAT CGCCG TCC CGGTG TTTTATCGCTTAGTT Swoo_4145 5041562 - 5044627 + | acriflavin resistance protein TERM 5122 5044648 - 5044689 + F 100 -11.8 -4.431 | gap 1 ATAAGCTTTGGCCTA GGCTGGCACGAATATCTCG CTTCC CGA-ATATTTGTGCTGGCC TTTTGTGACTCAGTA TERM 5123 5044812 - 5044797 - f 89 -6.1 -5.64274 | opp_overlap 5044797 5044796 5044789 TCAGGCATAAAAAAA CCTGC TCGAGG GCAGG CTTTTCTATTTTAAT TERM 5124 5044887 - 5044867 - f 76 -10.5 -2.73124 | opp_overlap 5044867 5044870, overlap 5044866 5044870 CGTCACGCTCGAAAG CAACGGATT TTG AATCCGTCG TGTCTACCAATTCCA TERM 5125 5044884 - 5044870 - f 74 -8.6 -3.51708 | opp_overlap 5044870 5044867, overlap 5044867 5044866 CACGCTCGAAAGCAA CGGATT TTG AATCCG TCGTGTCTACCAATT Swoo_4146 5045268 - 5045396 + | hypothetical protein TERM 5126 5045439 - 5045468 + T 73 -4.2 -5.01546 | gap 1, opp_overlap 5045441, overlap 5045441 GCTTTTTCTAATGCA AAGGGGC-CCTGC AATTA GCAAGAGCCCCTA TTTTTATGTCAGTTT TERM 5127 5045466 - 5045441 - T 76 -9 -3.75153 | gap 1, opp_overlap 5045439 5045441 TTTTTCTAATGCAAA GGGGC-CCTGC AATTA GCAAGAGCCCC TATTTTTATGTCAGT TERM 5128 5045441 - 5045466 + T 71 -6.8 -4.11744 | gap 1, opp_overlap 5045441, overlap 5045439 TTTTTCTAATGCAAA GGGGC-CCTGC AATTA GCAAGAGCCCC TATTTTTATGTCAGT Swoo_4147 5046116 - 5045505 - | hypothetical protein TERM 5129 5047164 - 5047151 - g 82 -5.3 -5.27477 | AGGTTAAGGAAAAAA CTCAA GAAC TTGAG CAATCGGTTTTAGTT Swoo_4148 5046352 - 5047992 + | integral membrane sensor signal transduction histidine kinase Swoo_4149 5049276 - 5048044 - | peptidase T Swoo_4150 5050301 - 5049486 - | UBA/THIF-type NAD/FAD binding protein TERM 5130 5049853 - 5049841 - G 71 -9.1 -3.42069 | overlap 5049839 CCAACGGTAACAATA GGCAG TTT CTGCC GCTTACACCAAGCGA TERM 5131 5051653 - 5051643 - g 74 -5.4 -4.61566 | GCTTAAAGCACAAAA CTAC TAT GTAG CTGCCGCATACAACA TERM 5132 5051890 - 5051880 - g 78 -5.4 -4.94902 | TAAGTACTACAAAAA CATC ACT GATG TTGAAGGCACTGACG Swoo_4151 5051023 - 5052069 + | porin TERM 5133 5052144 - 5052116 - f 100 -13.3 -3.31726 | opp_overlap 5052117, overlap 5052117 5052122 GTTTCTGATATAAGA TTTAAAGGCGACT TTT AGTCGCCTTTAAT TTTTCAATAAACGCT TERM 5134 5052117 - 5052143 + F 100 -16.8 -4.65895 | opp_overlap 5052116 5052117 5052122 TTTCTGATATAAGAT TTAAAGGCGACT TTT AGTCGCCTTTAA TTTTTCAATAAACGC TERM 5135 5052143 - 5052117 - f 100 -16.8 -2.58822 | opp_overlap 5052117, overlap 5052116 5052122 TTTCTGATATAAGAT TTAAAGGCGACT TTT AGTCGCCTTTAA TTTTTCAATAAACGC TERM 5136 5052138 - 5052122 - f 90 -12.3 -3.80142 | opp_overlap 5052117, overlap 5052117 5052116 GATATAAGATTTAAA GGCGACT TTT AGTCGCC TTTAATTTTTCAATA TERM 5137 5052785 - 5052746 - g 71 -8 -3.7642 | CTCAAGCAATAAAGA TGTTTTCAAGGCTAGAAA TACC TACCTAGGCCTGAAAACA GTAGCGGGAACGTTA Swoo_4152 5052474 - 5053502 + | porin TERM 5138 5053524 - 5053539 + T 89 -10.4 -4.46155 | opp_overlap 5053524 TGGCTTAAAGATAAA GCGACC AAAT GGTCGC TTTTATGCCTGTATA TERM 5139 5053539 - 5053524 - T 87 -10.4 -4.32857 | opp_overlap 5053524 TGGCTTAAAGATAAA GCGACC AAAT GGTCGC TTTTATGCCTGTATA Swoo_4153 5054247 - 5053576 - | thiopurine S-methyltransferase TERM 5140 5054036 - 5054026 - G 74 -3.2 -5.14563 | opp_overlap 5054026 GTTCTCAGCAAAAAA CTGC TCT ACAG CTGTTTGATTGAGCT Swoo_4154 5054734 - 5054390 - | hypothetical protein Swoo_4155 5055057 - 5056928 + | serine/threonine protein kinase TERM 5141 5056916 - 5056904 - T 71 -3.3 -5.08824 | overlap 5056886 5056905 GTTTTACCCAAAAAA CCCCA AAA TGGGT ACTAAGGGCTAACCG Swoo_4156 5057532 - 5056969 - | FxsA cytoplasmic membrane protein TERM 5142 5057328 - 5057349 + g 71 -4.3 -4.72986 | CAACAATCTCCTGAC CTGGCGCTT CGCC ACGAGCCAG TTTTTGCTGAACCTG TERM 5143 5057446 - 5057427 - G 79 -2.8 -5.40072 | TCGCTGTGAAAAAAA CCAAACCA ACAG TGGTCCAG CTACCTAAAGACTCA Swoo_4157 5057806 - 5058129 + | CutA1 divalent ion tolerance protein TERM 5144 5058282 - 5058305 + G 72 -6.8 -4.18018 | gap 1 CCCTACTACTGCTTA CCCCTTTAGCT CAT AG-TGAAGGGG TTTTCAGTAACAGCA Swoo_4158 5058221 - 5060050 + | protein-disulfide reductase TERM 5145 5060375 - 5060333 - T 95 -12.3 -4.2558 | gap 1, opp_overlap 5060341 5060347, overlap 5060347 TACCTCTCAGTAAAA TACCCCATAAAAAAGCCTCC AGAT GGAGGC-TTTTTATTGAGTA TTACTTCAACTCTTG TERM 5146 5060341 - 5060368 + T 83 -11.4 -3.21806 | opp_overlap 5060333 5060347, overlap 5060347 AGTAAAATACCCCAT AAAAAAGCCTCC AGAT GGAGGCTTTTTA TTGAGTATTACTTCA TERM 5147 5060362 - 5060347 - T 100 -10.4 -5.26918 | opp_overlap 5060347 5060341, overlap 5060333 ATACCCCATAAAAAA GCCTCC AGAT GGAGGC TTTTTATTGAGTATT TERM 5148 5060347 - 5060362 + T 93 -10.4 -5.12971 | opp_overlap 5060333 5060347, overlap 5060341 ATACCCCATAAAAAA GCCTCC AGAT GGAGGC TTTTTATTGAGTATT Swoo_4159 5062859 - 5060376 - | peptidase S9 prolyl oligopeptidase TERM 5149 5063032 - 5063022 - R 75 -3.2 -5.31456 | TGAAGCGATAAAAAA CAGC AAG GCTA AGAAGTTGTACAACT Swoo_4160 5063618 - 5063046 - | glutamine amidotransferase of anthranilate synthase Swoo_4161 5063750 - 5064850 + | diguanylate cyclase TERM 5150 5064885 - 5064843 - T 93 -5.1 -5.69023 | gap 1, opp_overlap 5064853 5064855, overlap 5064855 AAAAGATCAAAAAAA TTGCATAAAAA-AGCCAGTC GTCT GACTGGCTCTTCTTATCTAA CTCGCTAAGTCTTAC TERM 5151 5064853 - 5064874 + T 79 -8.7 -3.8969 | opp_overlap 5064843 5064855, overlap 5064855 AAAAATTGCATAAAA AAGCCAGTC GTCT GACTGGCTC TTCTTATCTAACTCG TERM 5152 5064855 - 5064872 + T 83 -11.3 -3.53276 | opp_overlap 5064843 5064855, overlap 5064853 AAATTGCATAAAAAA GCCAGTC GTCT GACTGGC TCTTCTTATCTAACT TERM 5153 5064872 - 5064855 - T 100 -11.3 -5.28826 | opp_overlap 5064855 5064853, overlap 5064843 AAATTGCATAAAAAA GCCAGTC GTCT GACTGGC TCTTCTTATCTAACT Swoo_4162 5065361 - 5064897 - | stringent starvation protein B Swoo_4163 5065991 - 5065362 - | glutathione S-transferase domain-containing protein TERM 5154 5066064 - 5066035 - R 100 -11.5 -5.86609 | gap 1, opp_overlap 5066041, overlap 5066041 GCAAAAAAACAAAAA GCAAAACGAGGGGC AAA GCCCCCCGTTT-AC AGTATGCGAATAATG TERM 5155 5066059 - 5066041 - R 100 -13.8 -4.88326 | opp_overlap 5066041, overlap 5066035 AAACAAAAAGCAAAA CGAGGGGC AAA GCCCCCCG TTTACAGTATGCGAA TERM 5156 5066041 - 5066059 + r 85 -11.6 -3.63627 | opp_overlap 5066041 5066035 AAACAAAAAGCAAAA CGAGGGGC AAA GCCCCCCG TTTACAGTATGCGAA Swoo_4164 5066801 - 5066100 - | cytochrome c1 Swoo_4165 5068015 - 5066801 - | cytochrome b/b6 domain-containing protein Swoo_4166 5068605 - 5068015 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 5157 5068911 - 5068894 - R 100 -8.4 -5.95539 | opp_overlap 5068894 CGGGAAATAAAAAAA GCTCGG ACTAAG CCGAGC TTTTAATTCAAACAG TERM 5158 5068894 - 5068911 + r 83 -8.4 -4.4078 | opp_overlap 5068894 CGGGAAATAAAAAAA GCTCGG ACTAAG CCGAGC TTTTAATTCAAACAG Swoo_4167 5069807 - 5068929 - | HflC protein Swoo_4168 5070949 - 5069810 - | HflK protein TERM 5159 5070112 - 5070100 - G 72 -5.5 -4.45945 | ATTGAGGAAGTAAAA GCTCA AAG CGAGC AACCTTACCTCTAGC Swoo_4169 5072291 - 5070993 - | GTP-binding proten HflX Swoo_4170 5072598 - 5072314 - | RNA chaperone Hfq Swoo_4171 5073582 - 5072692 - | tRNA delta(2)-isopentenylpyrophosphate transferase Swoo_4172 5075458 - 5073614 - | DNA mismatch repair protein MutL Swoo_4173 5076839 - 5075520 - | N-acetylmuramoyl-L-alanine amidase TERM 5160 5075860 - 5075871 + g 70 -7.2 -3.89695 | AATACCGCAAAACTC GCCG ACTC CGGC TTATGTTTATGCAAC TERM 5161 5076721 - 5076710 - G 74 -5.8 -4.62783 | overlap 5076711 TATTCAGGTCAAAAA CGAC TCGA GTCG ACTCAGGTGCAGCCC Swoo_4174 5077300 - 5076842 - | hypothetical protein Swoo_4175 5078875 - 5077409 - | carbohydrate kinase, YjeF related protein Swoo_4176 5079024 - 5079191 + | hypothetical protein TERM 5162 5079265 - 5079249 - T 90 -6.5 -5.59655 | opp_overlap 5079249 TAAAGCAATAAAAAA GGCACCC TAA AGGTACC TCATTGCGAGTAACA Swoo_4177 5079817 - 5079305 - | hypothetical protein TERM 5163 5080829 - 5080854 + r 70 -4.9 -4.54727 | overlap 5080850 GCGTAATCTTTGCTA TTTAAAGAGTT TGGT AAATCTTTAAA TTTTAATTTGGAGCG TERM 5164 5080952 - 5080977 + r 70 -4.9 -4.54727 | overlap 5080973 GCGTAATCTTTGCTA TTTAAAGAGTT TGGT AAGTCTTTAAA TTTTAATTTGGAGCG Swoo_4178 5081752 - 5081207 - | exonuclease RNase T and DNA polymerase III TERM 5165 5081775 - 5081788 + H 83 -3.8 -5.63517 | CCTTTTTCCCTATTT GCCT AAATTC AGGC TTTTTTGTTTAAGAC TERM 5166 5082489 - 5082476 - g 72 -3.1 -4.9448 | ATCGATCAAATAAAA GCACT ACTT AATGC GAAAGTGAGTGTTTT Swoo_4179 5081864 - 5082922 + | ribosome small subunit-dependent GTPase A Swoo_4180 5082959 - 5083822 + | phosphatidylserine decarboxylase TERM 5167 5084110 - 5084126 + G 74 -7.3 -4.2528 | CAACTATCCTCAGTC GCTATCG GCA TGATAGC TTTCTTCACTTACCC Swoo_4181 5083822 - 5084715 + | hypothetical protein TERM 5168 5085475 - 5085457 - g 75 -9.6 -3.45027 | opp_overlap 5085456, overlap 5085443 5085455 5085474 ACTTGTTAGGAAACA GCTCTCTC AAC AAGAGAGC CTCATTGAGTCGATT TERM 5169 5086069 - 5086053 - g 75 -4.4 -4.98857 | opp_overlap 5086053 ATTTAACCATAAAAA GTACTC TTAAT GAGCAC CTATTTTGGGTCCCT Swoo_4182 5084855 - 5088067 + | MscS mechanosensitive ion channel Swoo_4183 5088067 - 5088774 + | glycerophosphoryl diester phosphodiesterase Swoo_4184 5089124 - 5088792 - | hypothetical protein Swoo_4185 5089173 - 5090099 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 5170 5090245 - 5090274 + T 81 -9.3 -4.00445 | opp_overlap 5090251, overlap 5090250 5090251 GACCACTAACTATAT AAAAAAGGGAGGC CTAA GCCTCCCCTTTTG TTGTTATTAGTAGTG TERM 5171 5090250 - 5090269 + T 91 -9.2 -5.00467 | opp_overlap 5090251, overlap 5090245 5090251 CTAACTATATAAAAA AGGGAGGC CTAA GCCTCCCC TTTTGTTGTTATTAG TERM 5172 5090251 - 5090268 + T 95 -12.7 -3.58654 | opp_overlap 5090251, overlap 5090250 5090245 TAACTATATAAAAAA GGGAGGC CTAA GCCTCCC CTTTTGTTGTTATTA TERM 5173 5090268 - 5090251 - T 100 -12.7 -5.42131 | opp_overlap 5090251 5090250 5090245 TAACTATATAAAAAA GGGAGGC CTAA GCCTCCC CTTTTGTTGTTATTA Swoo_4186 5091870 - 5090290 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 5174 5091881 - 5091893 + H 72 -6.3 -4.50218 | CTCATGCCATGACTC CACTA ATA TAGTG TTCTTTTTAATCATT TERM 5175 5092255 - 5092238 - g 80 -5.5 -5.12617 | overlap 5092239 CAATGATGTAAAAAA GCGCCTA GGTG TAGGCGA TCAATGTGGCAAATG TERM 5176 5092254 - 5092239 - g 75 -9 -3.66486 | overlap 5092238 AATGATGTAAAAAAG CGCCTA GGTG TAGGCG ATCAATGTGGCAAAT Swoo_4187 5092149 - 5092340 + | BFD/(2Fe-2S)-binding domain-containing protein TERM 5177 5092361 - 5092409 + T 87 -12 -3.19091 | opp_overlap 5092366 5092368 5092370 5092378, overlap 5092363 5092370 5092378 ATGAAGCAGCCTAGT TAACAGACATAAAAAAAGCTGC GTATA GCAGCTTTTTTTATGTCTAGCA TTAATCAATCACTAT TERM 5178 5092363 - 5092408 + T 95 -14.4 -2.51133 | gap 1, opp_overlap 5092366 5092368 5092370 5092378, overlap 5092361 5092370 5092378 GAAGCAGCCTAGTTA AC-AGACATAAAAAAAGCTGC GTATA GCAGCTTTTTTTATGTCTAGC ATTAATCAATCACTA TERM 5179 5092404 - 5092366 - T 100 -20.7 -3.09327 | opp_overlap 5092363 5092361 5092370 5092378, overlap 5092368 5092370 5092378 GCAGCCTAGTTAACA GACATAAAAAAAGCTGC GTATA GCAGCTTTTTTTATGTC TAGCATTAATCAATC TERM 5180 5092402 - 5092368 - T 100 -17.5 -3.10522 | opp_overlap 5092363 5092361 5092370 5092378, overlap 5092366 5092370 5092378 AGCCTAGTTAACAGA CATAAAAAAAGCTGC GTATA GCAGCTTTTTTTATG TCTAGCATTAATCAA TERM 5181 5092400 - 5092370 - T 95 -14.3 -3.11072 | opp_overlap 5092363 5092361 5092370 5092378, overlap 5092368 5092366 5092378 CCTAGTTAACAGACA TAAAAAAAGCTGC GTATA GCAGCTTTTTTTA TGTCTAGCATTAATC TERM 5182 5092370 - 5092400 + T 95 -14.3 -2.92157 | opp_overlap 5092370 5092368 5092366 5092378, overlap 5092363 5092361 5092378 CCTAGTTAACAGACA TAAAAAAAGCTGC GTATA GCAGCTTTTTTTA TGTCTAGCATTAATC TERM 5183 5092378 - 5092392 + T 100 -7.1 -5.76633 | opp_overlap 5092370 5092368 5092366 5092378, overlap 5092370 5092363 5092361 ACAGACATAAAAAAA GCTGC GTATA GCAGC TTTTTTTATGTCTAG TERM 5184 5092392 - 5092378 - T 100 -7.1 -5.77988 | opp_overlap 5092378 5092370 5092363 5092361, overlap 5092370 5092368 5092366 ACAGACATAAAAAAA GCTGC GTATA GCAGC TTTTTTTATGTCTAG Swoo_4188 5094697 - 5092421 - | DNA topoisomerase IV, A subunit TERM 5185 5092800 - 5092828 + g 79 -8.2 -4.32951 | gap 1, opp_overlap 5092800 ATCACTTTCGAATTA GCAGGTAAGGTCA ATAG TG-CCTTACCAGC TTTATTCCTTGAGAT Swoo_4189 5095818 - 5094697 - | L-sorbosone dehydrogenase, putative Swoo_4190 5097804 - 5095909 - | DNA topoisomerase IV, B subunit Swoo_4191 5098422 - 5097844 - | hypothetical protein Swoo_4192 5099502 - 5098663 - | calcineurin phosphoesterase domain-containing protein TERM 5186 5098843 - 5098823 - G 72 -9.7 -3.20991 | opp_overlap 5098823 TTGAACTGAATGCAA GTTGAGGGC GTA GCCATCAAC TTTATCGGGCCGTGG TERM 5187 5098823 - 5098843 + g 81 -9.7 -3.86346 | opp_overlap 5098823 TTGAACTGAATGCAA GTTGAGGGC GTA GCCATCAAC TTTATCGGGCCGTGG Swoo_4193 5099964 - 5099512 - | hypothetical protein Swoo_4194 5100610 - 5100008 - | ADP-ribose diphosphatase TERM 5188 5100887 - 5100901 + H 89 -10 -4.52589 | AACAAGTTAATTTGC TCCTCC AGT GGAGGA TTTTGTCTAAAAAGG TERM 5189 5101229 - 5101215 - g 71 -8.6 -3.53298 | ATCAGTTTAAACCAA GTGATC TAT GATCAC AGCGCTTGGGTAGGA Swoo_4195 5100924 - 5102255 + | TolC family type I secretion outer membrane protein TERM 5190 5102287 - 5102264 - T 76 -10.4 -2.60763 | gap 1, opp_overlap 5102264 5102276, overlap 5102263 5102266 CCCATAGGTCATAAT CAGCTTGGCTG TGA CAGC-AAGCTG TCTTATACCGATTGA TERM 5191 5102264 - 5102287 + T 79 -10.4 -3.23447 | gap 1, opp_overlap 5102264 5102263 5102266, overlap 5102276 CCCATAGGTCATAAT CAGCTTGGCTG TGA CAGC-AAGCTG TCTTATACCGATTGA TERM 5192 5102317 - 5102343 + T 100 -18.2 -5.63374 | opp_overlap 5102317 ATATTAAATAAAAAA CCGCCAGTTAAT CAG ATTAACTGGCGG TTTTTTTAATGTTAA TERM 5193 5102343 - 5102317 - T 100 -18.2 -5.69793 | opp_overlap 5102317 ATATTAAATAAAAAA CCGCCAGTTAAT CAG ATTAACTGGCGG TTTTTTTAATGTTAA Swoo_4196 5103112 - 5102363 - | hypothetical protein Swoo_4197 5104091 - 5103120 - | hypothetical protein Swoo_4198 5104601 - 5104125 - | hypothetical protein Swoo_4199 5104634 - 5105371 + | enoyl-CoA hydratase/isomerase Swoo_4200 5105829 - 5105416 - | hypothetical protein Swoo_4201 5106069 - 5105848 - | phage shock protein C, PspC Swoo_4202 5106524 - 5106225 - | hypothetical protein TERM 5194 5106776 - 5106803 + r 73 -8.5 -3.60971 | opp_overlap 5106782, overlap 5106782 ATGGAGACGAAAACA AAAAAACCGCC TTTATT GGCGGTTTTTA TTTAGCAATTACACT TERM 5195 5106797 - 5106782 - R 100 -7.5 -6.11229 | opp_overlap 5106776 5106782 ACGAAAACAAAAAAA CCGCC TTTATT GGCGG TTTTTATTTAGCAAT TERM 5196 5106782 - 5106797 + r 100 -7.5 -5.27938 | opp_overlap 5106782, overlap 5106776 ACGAAAACAAAAAAA CCGCC TTTATT GGCGG TTTTTATTTAGCAAT Swoo_4203 5107813 - 5106818 - | YjbN family TIM-barrel protein Swoo_4204 5108127 - 5108741 + | CheC domain-containing protein Swoo_4205 5110106 - 5108784 - | hypothetical protein TERM 5197 5109894 - 5109866 - G 71 -10.3 -2.71144 | opp_overlap 5109866 5109865 5109874 CAGCGTGTTTAAGTA CTCCAGCACCACC TAC GGTGGTACTTAAG GTTTCAGTAGAAAAG TERM 5198 5110071 - 5110056 - G 74 -7.5 -4.16785 | opp_overlap 5110052 5110070 AGACGATAAATTAAA GGCGC AATAAA GCGCC AATATCACTTGGTAA TERM 5199 5110175 - 5110185 + r 73 -4 -5.1244 | opp_overlap 5110175 ATAAGTATATCTAAA TAAG CGA CTTA TTTTTATATTGCTAG Swoo_4206 5111273 - 5110197 - | alanine racemase Swoo_4207 5112689 - 5111283 - | replicative DNA helicase TERM 5200 5111460 - 5111432 - G 72 -8.2 -4.0044 | AATCATCATTATAAA CCTCATCACGAT AGATA AACATGATGAGG TCGGCATCTTGCTCA TERM 5201 5113443 - 5113457 + G 87 -10 -4.32201 | CAACTATGAGTACCC TCGCCA CTC TGGCGA TTTTACCTTCCTTCG TERM 5202 5114472 - 5114491 + G 70 -7.2 -3.87815 | gap 1, opp_overlap 5114472 5114475, overlap 5114475 CATTATCGCCTATAA CACGGCCAA AGG TTGGCC-TG TTTATCCAGATGCCA TERM 5203 5114475 - 5114489 + G 77 -10 -3.52906 | opp_overlap 5114472 5114475, overlap 5114472 TATCGCCTATAACAC GGCCAA AGG TTGGCC TGTTTATCCAGATGC TERM 5204 5114489 - 5114475 - g 70 -10 -2.5294 | opp_overlap 5114475 5114472, overlap 5114472 TATCGCCTATAACAC GGCCAA AGG TTGGCC TGTTTATCCAGATGC Swoo_4208 5112796 - 5115015 + | hypothetical protein TERM 5205 5115065 - 5115083 + T 72 -6 -4.3739 | overlap 5115061 5115067 AGCCTTTAGTTCCTA GGTTCTAG GTT CTAGAAGC TTTTCTACAAACATA TERM 5206 5115100 - 5115135 + T 73 -7 -4.15106 | gap 1, opp_overlap 5115105, overlap 5115105 TTTCTACAAACATAA AAAAACACCGC-CTAAT CAG ATTAGTGCGGTGTTCTC TTTTAAAGCTTCATC TERM 5207 5115105 - 5115130 + T 86 -11.3 -3.95836 | gap 1, opp_overlap 5115105, overlap 5115100 ACAAACATAAAAAAA CACCGC-CTAAT CAG ATTAGTGCGGTG TTCTCTTTTAAAGCT TERM 5208 5115130 - 5115105 - T 100 -11.3 -5.90231 | gap 1, opp_overlap 5115100 5115105 ACAAACATAAAAAAA CACCGC-CTAAT CAG ATTAGTGCGGTG TTCTCTTTTAAAGCT Swoo_4209 5115641 - 5115189 - | ribosomal protein L9 Swoo_4210 5115895 - 5115668 - | ribosomal protein S18 Swoo_4211 5116212 - 5115907 - | single-strand binding protein/primosomal replication protein n Swoo_4212 5116640 - 5116221 - | ribosomal protein S6 Swoo_4213 5116874 - 5117623 + | hypothetical protein TERM 5209 5117674 - 5117647 - T 100 -11.5 -5.64006 | opp_overlap 5117647 ATCTAAGTAAAAAAA TGCCATTAGAT AATGAA ATCTAATGGCA TTGTTATCCAGTAAA TERM 5210 5117647 - 5117674 + T 86 -11.5 -3.80733 | opp_overlap 5117647 ATCTAAGTAAAAAAA TGCCATTAGAT AATGAA ATCTAATGGCA TTGTTATCCAGTAAA Swoo_4214 5119055 - 5117730 - | hypothetical protein Swoo_4215 5119386 - 5119030 - | hypothetical protein TERM 5211 5120146 - 5120119 - R 100 -14.2 -5.06505 | AACCAGACACAAAAA TGCCGATGAGGA CTAC TCCACATCGGCA CTCAATAACGCTAAC Swoo_4216 5120949 - 5120212 - | RNA methyltransferase Swoo_4217 5123447 - 5120967 - | ribonuclease R TERM 5212 5122661 - 5122673 + g 81 -3.3 -5.36965 | opp_overlap 5122661 ATGGTAGTTGACGAA GATCG ACG CGACC TTTTTTATCATCTTC TERM 5213 5123485 - 5123506 + r 74 -7.5 -3.91072 | opp_overlap 5123465 5123490, overlap 5123488 AGAACACTATCTGGG TAATACAAA TCAA TTTGTATTA TTTATCGGGATTTCA Swoo_4218 5124170 - 5123508 - | Sel1 domain-containing protein TERM 5214 5123862 - 5123874 + g 82 -9.1 -4.19735 | TCTCAATAGTGCCAT CCCTC TAG GAGGG TTTGCTTTTACACAG TERM 5215 5124353 - 5124369 + r 79 -10.8 -2.95388 | opp_overlap 5124353 TCCTTAAAATAAAAA GGCCGC TTAAC GCGGCC TCTATACATTAACTA TERM 5216 5124369 - 5124353 - R 100 -10.8 -5.45802 | opp_overlap 5124353 TCCTTAAAATAAAAA GGCCGC TTAAC GCGGCC TCTATACATTAACTA Swoo_4219 5125673 - 5124378 - | adenylosuccinate synthase Swoo_4220 5125928 - 5125740 - | hypothetical protein TERM 5217 5126080 - 5126031 - R 84 -10.9 -3.85817 | opp_overlap 5126039 5126041 5126048, overlap 5126041 5126048 ATCTGTCGGCATAAA TTTCAGGTAATAAAAAACCCAGC ATAA GCTGGGTTTTTTGTATTCTGAAA GCGAAAAATTAACGC TERM 5218 5126039 - 5126072 + r 89 -11.9 -3.28712 | opp_overlap 5126031 5126041 5126048, overlap 5126041 5126048 GCATAAATTTCAGGT AATAAAAAACCCAGC ATAA GCTGGGTTTTTTGTA TTCTGAAAGCGAAAA TERM 5219 5126070 - 5126041 - R 87 -12.3 -3.09234 | opp_overlap 5126039 5126041 5126048, overlap 5126031 5126048 ATAAATTTCAGGTAA TAAAAAACCCAGC ATAA GCTGGGTTTTTTG TATTCTGAAAGCGAA TERM 5220 5126041 - 5126070 + r 95 -14.5 -3.21276 | opp_overlap 5126041 5126031 5126048, overlap 5126039 5126048 ATAAATTTCAGGTAA TAAAAAACCCAGC ATAA GCTGGGTTTTTTG TATTCTGAAAGCGAA TERM 5221 5126048 - 5126063 + r 100 -10.4 -5.5208 | opp_overlap 5126048 5126041 5126031, overlap 5126041 5126039 TCAGGTAATAAAAAA CCCAGC ATAA GCTGGG TTTTTTGTATTCTGA TERM 5222 5126063 - 5126048 - R 100 -10.4 -5.4833 | opp_overlap 5126041 5126039 5126048, overlap 5126041 5126031 TCAGGTAATAAAAAA CCCAGC ATAA GCTGGG TTTTTTGTATTCTGA Swoo_4221 5126481 - 5126089 - | ribosomal protein S9 Swoo_4222 5126927 - 5126496 - | ribosomal protein L13 Swoo_4223 5128295 - 5127189 - | AFG1 family ATPase Swoo_4224 5128410 - 5128784 + | hypothetical protein Swoo_4225 5128933 - 5130285 + | protease Do TERM 5223 5130336 - 5130358 + F 73 -9.2 -2.93073 | opp_overlap 5130334 5130336, overlap 5130334 GCCATGATGAATAGA TGAGGGGGAT ATC ATTCCTCTCA TGCTTATTCACAGCA Swoo_4226 5130416 - 5131501 + | periplasmic serine protease DegS TERM 5224 5131561 - 5131533 - T 100 -18.3 -4.49377 | opp_overlap 5131538, overlap 5131538 GGCATAACAAAATAA GAAAAGGCCTGCA TCA TGCAGGCCTTTCC GTGTCAATAATCACG TERM 5225 5131556 - 5131538 - T 100 -14.6 -5.14949 | opp_overlap 5131538, overlap 5131533 AACAAAATAAGAAAA GGCCTGCA TCA TGCAGGCC TTTCCGTGTCAATAA TERM 5226 5131538 - 5131556 + T 100 -14.6 -3.71873 | opp_overlap 5131538 5131533 AACAAAATAAGAAAA GGCCTGCA TCA TGCAGGCC TTTCCGTGTCAATAA Swoo_4227 5132846 - 5131587 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Swoo_4228 5133150 - 5132860 - | BolA family protein Swoo_4229 5133457 - 5133155 - | anti-sigma-factor antagonist TERM 5227 5133308 - 5133296 - G 74 -5.5 -4.65933 | CAGCTCTAAAATAAA CGCAA TTC CTGCG CTGTCACTGTATGAG Swoo_4230 5134120 - 5133458 - | toluene tolerance family protein Swoo_4231 5134591 - 5134124 - | hypothetical protein Swoo_4232 5135436 - 5134654 - | hypothetical protein Swoo_4233 5136314 - 5135499 - | ABC transporter related Swoo_4234 5136502 - 5137461 + | CaCA family Na(+)/Ca(+) antiporter Swoo_4235 5137550 - 5138527 + | KpsF/GutQ family protein TERM 5228 5138533 - 5138544 + F 74 -5.8 -4.64657 | opp_overlap 5138533 CGTTATCTAATATTA GGGA TTGC TCCC TTTTTACCAATTTAG TERM 5229 5139064 - 5139078 + G 71 -4.2 -4.74215 | CGGCCATCCTTATGT TCAGCA AGG TGCCGA TTTTGTTACTCATAT Swoo_4236 5138633 - 5139184 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Swoo_4237 5139181 - 5139738 + | hypothetical protein Swoo_4238 5139813 - 5140403 + | lipopolysaccharide transport periplasmic protein LptA TERM 5230 5140556 - 5140533 - g 73 -5.2 -4.7254 | opp_overlap 5140520 ATGGTGCAGGAAAAA CCACCACCTT TTAT ATGGTCGTGG GCTTAGTACAAAGTG TERM 5231 5140755 - 5140741 - g 78 -5.7 -4.99035 | TGAGCTAGATAAAAA TGCTC GTGAG GAGCA GCTTGAACATCTGCT Swoo_4239 5140400 - 5141131 + | ABC transporter related TERM 5232 5141138 - 5141158 + F 74 -9.8 -2.77233 | opp_overlap 5141136 5141140, overlap 5141137 5141140 AAGCTATAGTTAATC TAGAGGAG CAGTT CTCCTCTA ATTTAGAAATTCTAC Swoo_4240 5141283 - 5142764 + | RNA polymerase, sigma 54 subunit, RpoN Swoo_4241 5142973 - 5143260 + | sigma 54 modulation protein/ribosomal protein S30EA Swoo_4242 5143263 - 5143706 + | PTS IIA-like nitrogen-regulatory protein PtsN TERM 5233 5144474 - 5144488 + G 75 -8.6 -3.72576 | opp_overlap 5144473 5144476 GTCTATGTCACAGAG CAGCTT GCT AAGCTG TTTAGTCAAAGCAAA Swoo_4243 5143703 - 5144545 + | hypothetical protein Swoo_4244 5144538 - 5144813 + | phosphotransferase system, phosphocarrier protein HPr Swoo_4245 5144904 - 5146268 + | magnesium transporter Swoo_4246 5146610 - 5146317 - | hypothetical protein TERM 5234 5146618 - 5146602 - G 100 -13.7 -4.96848 | opp_overlap 5146602 CTTCGCAGAGAAAAA GGGAGCC ATT GGCTCCC TTATGCTAAGCAGCA TERM 5235 5146602 - 5146618 + g 100 -13.7 -3.40403 | opp_overlap 5146602 CTTCGCAGAGAAAAA GGGAGCC ATT GGCTCCC TTATGCTAAGCAGCA Swoo_4247 5147436 - 5146648 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 5236 5147599 - 5147618 + r 72 -7.8 -3.85817 | opp_overlap 5147599 TATCAAAAACAAAAA TGGCCTCC GAAA GGAAGCCA TTTATAGACAAGGAT TERM 5237 5147618 - 5147599 - R 100 -10 -5.65496 | opp_overlap 5147599 TATCAAAAACAAAAA TGGCCTCC GAAA GGAAGCCA TTTATAGACAAGGAT Swoo_4248 5148332 - 5147658 - | OmpA/MotB domain-containing protein Swoo_4249 5148898 - 5148470 - | GtrA family protein Swoo_4250 5150277 - 5148886 - | glycosyl transferase family protein TERM 5238 5149219 - 5149188 - G 79 -11.6 -3.09004 | gap 1, opp_overlap 5149187 5149186, overlap 5149185 5149192 TGACGGCTAAAAGTA GCAAGCCACTGACGC CAA GCG-CTATGGCTTGC AGTTTAGGTATTGTC Swoo_4251 5151293 - 5150274 - | glycosyl transferase family protein TERM 5239 5151627 - 5151652 + G 71 -10.5 -2.73875 | gap 1, opp_overlap 5151609 5151626, overlap 5151624 GGCTAAGCAACTTAG GCATATGGGGTG CAA CACCCCA-GTGC TGATGTTAACAGCAC Swoo_4252 5151418 - 5152104 + | two component transcriptional regulator TERM 5240 5152155 - 5152129 - g 81 -2.2 -5.53991 | CACCGAGGAAAAAAA GCTCAGTCAACA CCA TGACGAGTAAGC TCAGTATCTACTTTG Swoo_4253 5152104 - 5153372 + | integral membrane sensor signal transduction histidine kinase TERM 5241 5153413 - 5153386 - T 83 -5.7 -5.48054 | gap 2, opp_overlap 5153386 5153398 AGTAAAAGCAAAAAA GGCACTCTATACC CATG GGTA-AG-GTGCC TTTGGCTTTGCAGGA TERM 5242 5153467 - 5153434 - T 72 -7.5 -3.73042 | overlap 5153432 5153436 CTTTGCAGGAAAATA GAGACGTATTTAACC AGTT GGCTAAATACGTCAA CCTAACTAAAGAGTA TERM 5243 5153465 - 5153436 - T 100 -14.5 -3.44672 | overlap 5153434 5153432 TTGCAGGAAAATAGA GACGTATTTAACC AGTT GGCTAAATACGTC AACCTAACTAAAGAG Swoo_4254 5155662 - 5153473 - | decaheme cytochrome c TERM 5244 5154040 - 5154020 - G 70 -10.5 -2.59881 | overlap 5154019 GAGTCATGGTAGAAC TCATAGCTG TGA CAGCCATGA CAAGATGCATTATCA TERM 5245 5154771 - 5154760 - G 70 -7.2 -3.99678 | AGCTGGATAATCAAA GGCG TGAT CGCC ACCATAACCCGCTAT TERM 5246 5155732 - 5155717 - R 72 -5.4 -4.66953 | TGAACAGTTCAAAAA TACCCC AAAA GAGGTA GGGTTAATTTGAAGC TERM 5247 5155883 - 5155911 + r 93 -13.4 -2.85763 | opp_overlap 5155873 5155883 5155888, overlap 5155879 5155888 ATTCAGTTCTAAAAA TAAAACAGCACT ATTAA AGTGCTGTTTTA TAAGTTTTTAGATAT TERM 5248 5155911 - 5155883 - R 100 -13.4 -4.60041 | opp_overlap 5155883 5155879 5155888, overlap 5155873 5155888 ATTCAGTTCTAAAAA TAAAACAGCACT ATTAA AGTGCTGTTTTA TAAGTTTTTAGATAT TERM 5249 5155888 - 5155906 + r 86 -8.9 -4.56887 | opp_overlap 5155883 5155888, overlap 5155883 5155879 GTTCTAAAAATAAAA CAGCACT ATTAA AGTGCTG TTTTATAAGTTTTTA TERM 5250 5155906 - 5155888 - R 100 -8.9 -5.26119 | opp_overlap 5155888 5155883 5155879, overlap 5155883 GTTCTAAAAATAAAA CAGCACT ATTAA AGTGCTG TTTTATAAGTTTTTA Swoo_4255 5157489 - 5155951 - | FG-GAP repeat-containing protein Swoo_4256 5158332 - 5157649 - | hypothetical protein TERM 5251 5159748 - 5159773 + G 78 -11.1 -3.14051 | overlap 5159746 5159759 GTCGAAGCTGGTGCT GCTGGAGGCGC TTAC GTACCTCCAGC TCTTGATGGAAGTCG Swoo_4257 5158500 - 5160410 + | hypothetical protein TERM 5252 5160465 - 5160429 - f 78 -10.2 -3.23042 | gap 1, opp_overlap 5160451 5160452 5160456, overlap 5160432 AAGACGCAGTATCAA TCACTCCCTGAGCC-AT CCCC ATAGGCTCAGGGAGAGC CCTCTATTTTGCACA TERM 5253 5160462 - 5160432 - f 100 -14.9 -2.80195 | gap 1, opp_overlap 5160451 5160452 5160456, overlap 5160429 ACGCAGTATCAATCA CTCCCTGAGCC-AT CCCC ATAGGCTCAGGGAG AGCCCTCTATTTTGC TERM 5254 5161613 - 5161627 + G 75 -8.6 -3.75933 | AGTCAGAGCCACCAG CCTATC TAT GATAGG TTTGATGCAGTATAT Swoo_4258 5160825 - 5161808 + | transporter DMT superfamily protein Swoo_4259 5162389 - 5161805 - | PGAP1 family protein TERM 5255 5161874 - 5161837 - G 72 -8.7 -3.62046 | gap 1, overlap 5161865 TTAGCTCTGCAATAA TCTCATCGGTGATCTT ACGACTA AAGATCACCGAC-AGA TGTAAGAAAATAAAG TERM 5256 5163247 - 5163235 - g 80 -9.1 -4.07885 | CACGTTTCGCTAAAA GTGCC TTT GGCAC GGTCGATCTGATCAA Swoo_4260 5162490 - 5163497 + | hypothetical protein TERM 5257 5163480 - 5163500 + T 71 -8.4 -3.4243 | opp_overlap 5163478, overlap 5163479 CCATTGAAAATAGTC GCTTTAAC CTTAA GTTAAAGC TGTTCATTTTGGGTG Swoo_4261 5165917 - 5163959 - | peptidase S9 prolyl oligopeptidase TERM 5258 5164951 - 5164973 + g 75 -10.8 -2.90496 | overlap 5164948 5164953 CTCCATCGAGTACTT TATCTATTTC AGA GAAATAGATA TGCTTTAGAAAGCCG Swoo_4262 5166446 - 5165919 - | hypothetical protein Swoo_4263 5167281 - 5166664 - | hypothetical protein Swoo_4264 5168844 - 5167468 - | fumarate lyase Swoo_4265 5169268 - 5168894 - | hypothetical protein TERM 5259 5169310 - 5169274 - R 93 -11.1 -4.9725 | opp_overlap 5169274 ATTGGCACATAAAAA CCACTTAATGAGAATAA CAA TTAATATCATTAAGTGG TTTTAGGCTGAATAT TERM 5260 5169274 - 5169310 + r 86 -11.1 -4.15006 | opp_overlap 5169274 ATTGGCACATAAAAA CCACTTAATGAGAATAA CAA TTAATATCATTAAGTGG TTTTAGGCTGAATAT Swoo_4266 5169909 - 5169394 - | hypothetical protein TERM 5261 5169973 - 5169955 - R 91 -10.2 -4.84918 | opp_overlap 5169959 GGCAGAAACAGAAAA CCCACCTC TAT GGGGTGGG TTCAACTGATAAAAA TERM 5262 5170026 - 5170000 - R 75 -6.6 -4.41797 | overlap 5170002 AAAAGCATATCAAAA TCCCACCATTCC TAT GGAATGATGATA ATGATTTTACACAGC TERM 5263 5170024 - 5170002 - R 71 -9.2 -2.52986 | overlap 5170000 AAGCATATCAAAATC CCACCATTCC TAT GGAATGATGA TAATGATTTTACACA Swoo_4267 5172308 - 5170218 - | beta-lactamase domain-containing protein Swoo_4268 5173523 - 5172420 - | AraC family transcriptional regulator Swoo_4269 5173964 - 5173527 - | GCN5-related N-acetyltransferase TERM 5264 5173934 - 5173923 - G 71 -2.2 -5.08088 | AAGCTGCAACAAAAA GTCA TGAT CGAC TTGCTCGGCCCTCAC TERM 5265 5174376 - 5174360 - H 73 -3.7 -5.02476 | opp_overlap 5174360 ACATTCGCCAAAAAA TAACCAA CAG TGGGTTA TTTAAGACTCAAACA TERM 5266 5174484 - 5174500 + G 83 -6.5 -5.0538 | overlap 5174480 ATAGCACTTTCGTCC CGGTGGC AGG GCTATCG TTTTTTGCAATAGCA Swoo_4270 5174438 - 5175610 + | major facilitator transporter TERM 5267 5175654 - 5175621 - f 90 -11.1 -4.62471 | opp_overlap 5175628, overlap 5175628 CTTAACTCTCAAAAA TAGGAAAGGGGGACT CTTT AGTCCCCCTTTTTTA TAGCACTCCCCTGTC TERM 5268 5175647 - 5175628 - f 100 -13.6 -4.13748 | opp_overlap 5175628, overlap 5175621 CTCAAAAATAGGAAA GGGGGACT CTTT AGTCCCCC TTTTTTATAGCACTC TERM 5269 5175628 - 5175647 + F 100 -13.6 -5.252 | opp_overlap 5175621 5175628 CTCAAAAATAGGAAA GGGGGACT CTTT AGTCCCCC TTTTTTATAGCACTC Swoo_4271 5175924 - 5176298 + | hypothetical protein TERM 5270 5176401 - 5176358 - f 78 -9.8 -3.2794 | opp_overlap 5176360 5176362 5176365, overlap 5176360 CTGTATTCACACCAA TAGATAGGTTTGGTTTCATC CTCC AATGAAACCAAACTCATCTG ATTCAAGCCCTCTTT TERM 5271 5176360 - 5176399 + F 81 -11.7 -2.71483 | opp_overlap 5176358 5176360, overlap 5176362 5176365 GTATTCACACCAATA GATAGGTTTGGTTTCAT CCTCCA ATGAAACCAAACTCATC TGATTCAAGCCCTCT TERM 5272 5176399 - 5176360 - f 87 -12.4 -3.20573 | opp_overlap 5176360 5176362 5176365, overlap 5176358 GTATTCACACCAATA GATAGGTTTGGTTTCATC CTCC AATGAAACCAAACTCATC TGATTCAAGCCCTCT TERM 5273 5176365 - 5176394 + F 85 -12.4 -2.69964 | opp_overlap 5176360 5176358, overlap 5176362 5176360 CACACCAATAGATAG GTTTGGTTTCAT CCTCCA ATGAAACCAAAC TCATCTGATTCAAGC Swoo_4272 5176546 - 5177439 + | uncharacterized membrane-anchored protein-like protein TERM 5274 5177487 - 5177528 + F 77 -10.3 -2.99947 | TCACCTTAACTCCAC CATGCTCATCGAATACATA ACCC TAGGTATTCGATGAGCAGA TCTATATACCAGTTA Swoo_4273 5177746 - 5179245 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 5275 5179289 - 5179255 - T 100 -21.7 -3.75193 | overlap 5179284 AATTAGATACTCAAA GGCACACTTTTCCCT CCCTT AGGGAAAAGTGTGCC TATAGGCCAAACATT Swoo_4274 5180102 - 5179314 - | hypothetical protein Swoo_4275 5180340 - 5181242 + | hypothetical protein Swoo_4276 5181677 - 5181234 - | hypothetical protein TERM 5276 5181752 - 5181737 - R 72 -7.6 -3.86995 | opp_overlap 5181728, overlap 5181728 GGAAATTGACAAGAA GTGTCA TTAG TGACAC TTAAGAGGCCATTAA Swoo_4277 5182176 - 5181799 - | glutathione-dependent formaldehyde-activating, GFA Swoo_4278 5182865 - 5182263 - | hypothetical protein TERM 5277 5182773 - 5182789 + g 86 -9.5 -4.43815 | opp_overlap 5182773 TAAGGAGACATGAAA TAGTGGA GCA TCCACTA TTTTGCTATATTCCT TERM 5278 5182789 - 5182773 - G 81 -9.5 -3.91027 | opp_overlap 5182773 TAAGGAGACATGAAA TAGTGGA GCA TCCACTA TTTTGCTATATTCCT TERM 5279 5183068 - 5183084 + H 85 -5.9 -5.44119 | opp_overlap 5183057 5183068 AAACGCTCAACATAA GCTTGAT AGC ATTAAGC TTTTTTTACCCTAAA TERM 5280 5183169 - 5183159 - g 70 -5.4 -4.4204 | AATAACGATAATAAA GATG TCG CATC AGGTTTAAACCGCCG TERM 5281 5183458 - 5183436 - g 74 -10.6 -2.72052 | overlap 5183433 5183428 AAACTAATGAGATGA TCTCTGCCAA TCC TTGGCAGAGC AACATTCCAACCATT Swoo_4279 5183141 - 5184529 + | aminotransferase class V TERM 5282 5184559 - 5184581 + T 100 -12.8 -4.64676 | opp_overlap 5184559 CATTAGATAGAAAAA TGGCCTTGAG AGC TTCAAGGCCA TTTTATTAGAAGTGA TERM 5283 5184581 - 5184559 - T 100 -12.1 -5.05601 | opp_overlap 5184559 CATTAGATAGAAAAA TGGCCTTGA GAGCT TCAAGGCCA TTTTATTAGAAGTGA TERM 5284 5184629 - 5184609 - T 71 -3.3 -5.16841 | TGATATCAATAAAAA TTAAGCG GTCGCGA CGCCTAA GCTCTCCTGCTCCAT Swoo_4280 5186999 - 5184609 - | diguanylate cyclase/phosphodiesterase TERM 5285 5186513 - 5186495 - G 72 -8 -3.91541 | overlap 5186496 GCAGCAAAGTAATAA CCGGCCCC TCT GGGGTCGA TAACATCAATATCTT Swoo_4281 5187936 - 5187004 - | extracellular solute-binding protein Swoo_4282 5188723 - 5188301 - | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 5286 5188366 - 5188385 + g 71 -7.8 -3.75629 | opp_overlap 5188362 GGGGTACATCATCAT GACCAGCT TTCG AGCAGGTC TTTACCTTCGCCATC TERM 5287 5190134 - 5190144 + r 74 -5.4 -4.77036 | CTCTCACGATTAGTG GTGA TAT TCAC TTTTTGGTGCTCCGC Swoo_4284 5190438 - 5190115 - | hypothetical protein TERM 5288 5190885 - 5190866 - g 72 -5.6 -4.49556 | overlap 5190843 GCTGCAGCAAAGAAA GCATGCCG AACT CAGCCTGC AATTTCATTATCAAT Swoo_4285 5190779 - 5191666 + | LysR family transcriptional regulator TERM 5289 5192775 - 5192761 - g 72 -7.8 -3.91412 | opp_overlap 5192760 ATTACACTTTACAAA GAGCCC AGT GGACTC ATGGATTCCCAGGTA Swoo_4286 5192079 - 5194286 + | hypothetical protein TERM 5290 5194349 - 5194311 - T 70 -6 -4.30809 | opp_overlap 5194317 5194318 5194320, overlap 5194314 5194318 5194322 GAATACTTAGTAAAA CAATTTATAGAGAGGCTC TAC GAGCCTCTCTACTTATCT CTCAATGACCTATCA TERM 5291 5194346 - 5194314 - T 86 -9.9 -4.26327 | opp_overlap 5194317 5194318 5194320, overlap 5194311 5194318 5194322 TACTTAGTAAAACAA TTTATAGAGAGGCTC TAC GAGCCTCTCTACTTA TCTCTCAATGACCTA TERM 5292 5194317 - 5194343 + T 100 -13.8 -3.60525 | opp_overlap 5194314 5194311 5194318 5194322, overlap 5194318 5194320 TTAGTAAAACAATTT ATAGAGAGGCTC TAC GAGCCTCTCTAC TTATCTCTCAATGAC TERM 5293 5194342 - 5194318 - T 100 -17.3 -2.76936 | opp_overlap 5194317 5194318 5194320, overlap 5194314 5194311 5194322 TAGTAAAACAATTTA TAGAGAGGCTC TAC GAGCCTCTCTA CTTATCTCTCAATGA TERM 5294 5194318 - 5194342 + T 100 -17.3 -2.75993 | opp_overlap 5194318 5194314 5194311 5194322, overlap 5194317 5194320 TAGTAAAACAATTTA TAGAGAGGCTC TAC GAGCCTCTCTA CTTATCTCTCAATGA TERM 5295 5194320 - 5194340 + T 100 -15.5 -2.92265 | opp_overlap 5194318 5194314 5194311 5194322, overlap 5194318 5194317 GTAAAACAATTTATA GAGAGGCTC TAC GAGCCTCTC TACTTATCTCTCAAT TERM 5296 5194338 - 5194322 - T 87 -12.3 -2.99842 | opp_overlap 5194320 5194318 5194317, overlap 5194318 5194314 5194311 AAAACAATTTATAGA GAGGCTC TAC GAGCCTC TCTACTTATCTCTCA Swoo_4287 5194836 - 5194432 - | hypothetical protein Swoo_4288 5195194 - 5196858 + | sulphate transporter TERM 5297 5196918 - 5196893 - T 100 -13.3 -5.14563 | opp_overlap 5196893 TTCGCGATTAAAAAA GCCCCGACACC TTGA GATATCGGGGC TTTATACCAATCACT TERM 5298 5196893 - 5196918 + T 79 -8.9 -3.87994 | opp_overlap 5196893 TTCGCGATTAAAAAA GCCCCGACACC TTGA GATATCGGGGC TTTATACCAATCACT Swoo_4289 5198050 - 5196932 - | monooxygenase FAD-binding TERM 5299 5197756 - 5197734 - G 72 -7 -4.28018 | AACATTTTATCAAAA GCTTGACG ATTGAGG CGCCAAGC CGGTCCCTGAGGATT TERM 5300 5198016 - 5197983 - G 71 -9.5 -3.04144 | gap 1 GTCTTAGTTCGAATA GCGATGGCCGCCGCCA AAC CAGCGG-GGCCACCTC CCAAGATAACCACAT Swoo_4290 5200166 - 5198064 - | hypothetical protein Swoo_4291 5201152 - 5200178 - | hypothetical protein Swoo_4292 5201598 - 5202143 + | hypothetical protein TERM 5301 5202189 - 5202154 - T 86 -8.3 -4.68846 | opp_overlap 5202151 5202156 5202157, overlap 5202155 5202157 ATTAAGAAAGTAAAA GCAGCCACCCACAAT AAATCA ATTGTGGGTGGCCTT ATTTATTATTGTGGG TERM 5302 5202188 - 5202155 - T 85 -11.8 -3.39681 | opp_overlap 5202151 5202156 5202157, overlap 5202154 5202157 TTAAGAAAGTAAAAG CAGCCACCCACAAT AAATCA ATTGTGGGTGGCCT TATTTATTATTGTGG TERM 5303 5202156 - 5202187 + T 100 -13.1 -4.35992 | opp_overlap 5202155 5202154 5202157, overlap 5202151 5202157 TAAGAAAGTAAAAGC AGCCACCCACAAT AAATCA ATTGTGGGTGGCC TTATTTATTATTGTG TERM 5304 5202186 - 5202157 - T 100 -16.6 -3.24825 | opp_overlap 5202157 5202156 5202151, overlap 5202155 5202154 AAGAAAGTAAAAGCA GCCACCCACAAT AAATCA ATTGTGGGTGGC CTTATTTATTATTGT TERM 5305 5202157 - 5202186 + T 100 -16.6 -3.19969 | opp_overlap 5202155 5202154 5202157, overlap 5202156 5202151 AAGAAAGTAAAAGCA GCCACCCACAAT AAATCA ATTGTGGGTGGC CTTATTTATTATTGT Swoo_4293 5202962 - 5202243 - | hypothetical protein Swoo_4294 5204033 - 5203098 - | hypothetical protein TERM 5306 5203234 - 5203209 - G 72 -3.3 -4.99043 | overlap 5203212 5203228 GTGCGAGAAATAAAA CAGTGTCAT CGACAGGT AAGACACTG ACATGTCGCGCACGC Swoo_4295 5204332 - 5204952 + | cold-shock DNA-binding domain-containing protein TERM 5307 5205050 - 5205033 - T 91 -9.9 -4.78107 | opp_overlap 5205046 TAGGAGGATGAAAAA CGCACAA TTTA TTGTGCG TGGCCCTATTTATTT Swoo_4296 5205654 - 5205151 - | hypothetical protein TERM 5308 5205734 - 5205719 - R 71 -3.2 -5.14965 | overlap 5205720 AGCCTGACTAAAAAA TGCTCT ACAT AGAGCT TCCGCATCATCCAAT TERM 5309 5205860 - 5205825 - R 74 -9.7 -2.63479 | overlap 5205828 AATAGTTTGAGATCA CAAGGTAACCCTGGC GTGTAA GCCTGGTCTACCTTG CAGGAATGAAGGGCT Swoo_4297 5206560 - 5205901 - | hypothetical protein TERM 5310 5206405 - 5206393 - G 86 -3.3 -5.49234 | ATAGCCAATAAAAAA CACCC AGG GGTTG ATAGATTGAATTGAC Swoo_4298 5207014 - 5206640 - | hypothetical protein Swoo_4299 5208368 - 5207391 - | hypothetical protein TERM 5311 5208300 - 5208288 - G 85 -9.1 -4.33258 | opp_overlap 5208286 ATTTCCAAATAGAAA GGCAC GGC GTGCC ACTCTTGAGCAACAA TERM 5312 5208701 - 5208685 - R 83 -7.9 -4.64334 | opp_overlap 5208683 5208685 5208685 5208687, overlap 5208672 5208687 AACGCCGCAATAAAA GGCAGCG GTA CGCTGTC CTATTTGATTGCCTT TERM 5313 5208685 - 5208702 + r 70 -7.7 -3.56675 | gap 1, opp_overlap 5208672 5208685 5208687, overlap 5208683 5208685 5208687 AACGCCGCAATAAAA GG-CAGCG GTA CGCTGTCC TATTTGATTGCCTTG TERM 5314 5208685 - 5208701 + r 74 -10.1 -2.73282 | opp_overlap 5208672 5208685 5208687, overlap 5208685 5208683 5208687 AACGCCGCAATAAAA GGCAGCG GTA CGCTGTC CTATTTGATTGCCTT Swoo_4301 5209238 - 5208729 - | hypothetical protein TERM 5315 5209333 - 5209353 + r 78 -3.3 -5.4833 | overlap 5209337 ACTGTTTTTTGTCCT TGTTTAACA GCT TGTTATGCA TTTTTTCTTAAATAG Swoo_4302 5209781 - 5209347 - | hypothetical protein TERM 5316 5209510 - 5209494 - G 79 -2.9 -5.4659 | TAATACAAAGAAAAA GCACCAC GAC ATGACGC CACTAATAACGATTG Swoo_4303 5210306 - 5209992 - | hypothetical protein Swoo_4304 5210709 - 5210404 - | hypothetical protein Swoo_4305 5211280 - 5210834 - | hypothetical protein Swoo_4306 5211721 - 5211431 - | hypothetical protein TERM 5317 5212784 - 5212772 - g 76 -5.5 -4.83169 | ACCCTGTGACAAAAA TGCCC TGT AGGCA CCACCGCCATGACAG Swoo_4307 5212069 - 5213028 + | integron integrase TERM 5318 5213107 - 5213082 - T 100 -15.5 -5.37043 | opp_overlap 5213074 5213082 ACGGCATACAAAAAA GCCCCGATACC GTTA GGTATCGGGAC TTTCATCATTCTTTT TERM 5319 5213082 - 5213107 + T 100 -13.3 -3.91642 | opp_overlap 5213082, overlap 5213074 ACGGCATACAAAAAA GCCCCGATACC GTTA GGTATCGGGAC TTTCATCATTCTTTT Swoo_4308 5214928 - 5213276 - | chaperonin GroEL TERM 5320 5214729 - 5214750 + g 83 -11.7 -3.24232 | overlap 5214727 5214725 TGTGCACCCATGTTC TCGAACTTG TCTT CAAGTTCGA TCTCTTTAGCAACAG Swoo_4309 5215301 - 5215011 - | chaperonin Cpn10 Swoo_4310 5215531 - 5216886 + | MATE efflux family protein Swoo_4312 5219508 - 5217940 - | polysaccharide deacetylase TERM 5321 5219159 - 5219144 - G 73 -9 -3.53012 | GCTTGCTCTTGCAAA GGATCC AACT GGATCC CCATCGCAAAAGTTT TERM 5322 5219667 - 5219642 - R 77 -10.7 -2.90956 | opp_overlap 5219645, overlap 5219630 5219645 AAATTAGCGGAGATA TAACTTAACTT TATA AAGTTAAGTTA TATCCAAGACTTAAT TERM 5323 5219664 - 5219645 - R 70 -8 -3.59698 | opp_overlap 5219645, overlap 5219642 5219630 TTAGCGGAGATATAA CTTAACTT TATA AAGTTAAG TTATATCCAAGACTT Swoo_4313 5220609 - 5219665 - | LysR family transcriptional regulator TERM 5324 5220676 - 5220653 - H 71 -3.8 -4.91987 | opp_overlap 5220657, overlap 5220655 AACCGAATAACAAAA TACACTATGC TCAC GCTTAGTGTT AACAATCAAGCCTAA TERM 5325 5220674 - 5220655 - H 71 -6.4 -4.06582 | opp_overlap 5220657, overlap 5220653 CCGAATAACAAAATA CACTATGC TCAC GCTTAGTG TTAACAATCAAGCCT Swoo_4314 5220805 - 5221887 + | RND family efflux transporter MFP subunit Swoo_4315 5221891 - 5224977 + | acriflavin resistance protein TERM 5326 5225034 - 5225060 + F 90 -11.7 -3.90112 | gap 1, overlap 5225036 AACTGCTTCCCGGCA GA-CCCGATCCA GAGA TGGATCGGGATC TTTCATTAAAAACAC TERM 5327 5225036 - 5225057 + F 95 -14.5 -2.72166 | overlap 5225034 CTGCTTCCCGGCAGA CCCGATCCA GAGA TGGATCGGG ATCTTTCATTAAAAA Swoo_4316 5225141 - 5225488 + | hypothetical protein TERM 5328 5225574 - 5225534 - T 100 -18 -4.44819 | gap 1, opp_overlap 5225536 5225541, overlap 5225541 GACAAGACAGTAAAA TAA-AAAACGGCCAAACAG ATAT CTGTTTGGCCGTTTTGTTA GCTTAAACGATTAAC TERM 5329 5225536 - 5225571 + T 100 -17.8 -3.17571 | opp_overlap 5225534 5225541, overlap 5225541 CAAGACAGTAAAATA AAAAACGGCCAAACAG ATAT CTGTTTGGCCGTTTTG TTAGCTTAAACGATT TERM 5330 5225541 - 5225566 + T 100 -17.7 -4.72029 | opp_overlap 5225534 5225541, overlap 5225536 CAGTAAAATAAAAAA CGGCCAAACAG ATAT CTGTTTGGCCG TTTTGTTAGCTTAAA TERM 5331 5225566 - 5225541 - T 100 -17.7 -5.83211 | opp_overlap 5225541 5225536, overlap 5225534 CAGTAAAATAAAAAA CGGCCAAACAG ATAT CTGTTTGGCCG TTTTGTTAGCTTAAA Swoo_4317 5225901 - 5225596 - | hypothetical protein Swoo_4318 5226431 - 5226069 - | hypothetical protein TERM 5332 5226583 - 5226561 - R 93 -7 -5.53288 | overlap 5226563 TTGAACCTAAAAAAA TACCCCGTCT AAT AAACGAGGCA TTATATTCATTTTGT TERM 5333 5226581 - 5226563 - R 78 -7.4 -4.40173 | overlap 5226561 GAACCTAAAAAAATA CCCCGTCT AAT AAACGAGG CATTATATTCATTTT Swoo_4319 5226795 - 5226628 - | hypothetical protein Swoo_4320 5226989 - 5227534 + | XRE family transcriptional regulator TERM 5334 5227572 - 5227546 - T 76 -5.2 -5.14645 | opp_overlap 5227547, overlap 5227547 ATAATCCAATAAAAA GCTAAGAAAACT CAG AGTCCTCTTAGG CTTTTTTCATCTTTA TERM 5335 5227571 - 5227547 - T 74 -8.7 -3.6716 | opp_overlap 5227547, overlap 5227546 TAATCCAATAAAAAG CTAAGAAAACT CAG AGTCCTCTTAG GCTTTTTTCATCTTT Swoo_4321 5230011 - 5227606 - | hypothetical protein TERM 5336 5230229 - 5230190 - R 79 -8.9 -4.07885 | gap 2, opp_overlap 5230197, overlap 5230197 CATGTCGGCCTAAAA CAACAAAGGGGAGATACTC CTAA GAATA-CTCCCCTTT-TTG ATCTGCTCTAGAGTG TERM 5337 5230197 - 5230223 + r 77 -5.9 -4.83269 | gap 1, opp_overlap 5230190 5230197 GCCTAAAACAACAAA GGGGAGATACTC CTAA GAATA-CTCCCC TTTTTGATCTGCTCT TERM 5338 5230223 - 5230197 - R 86 -8.1 -4.67697 | gap 1, opp_overlap 5230197, overlap 5230190 GCCTAAAACAACAAA GGGGAGATACTC CTAA GAATA-CTCCCC TTTTTGATCTGCTCT Swoo_4322 5234246 - 5230509 - | PAS/PAC sensor hybrid histidine kinase TERM 5339 5233690 - 5233674 - G 70 -7.3 -3.91911 | opp_overlap 5233673 5233674 GGCAGGCCAAGGAAA GTAGGAC ATA ATCCTAC GTTTTGAGATGTAGT TERM 5340 5234238 - 5234259 + g 76 -10.2 -3.36968 | opp_overlap 5234235 5234234 5234238 AGTAACACGAACTGA CTCAGGCA TATCCC TGCCTGAG TTATAAAATTCAATA TERM 5341 5234259 - 5234238 - G 70 -10.2 -2.6078 | opp_overlap 5234238, overlap 5234235 5234234 AGTAACACGAACTGA CTCAGGCA TATCCC TGCCTGAG TTATAAAATTCAATA TERM 5342 5234489 - 5234460 - R 73 -4.3 -4.8622 | gap 1 GCTTTGAATTAAAAA GGCCTCC-GCTAAT TTA AATAGCCAGAGACC CAGTAAGTTAAGTTT Swoo_4323 5235910 - 5234516 - | PhoH family protein TERM 5343 5236686 - 5236712 + G 81 -11.6 -3.24329 | overlap 5236684 5236691 CAGATTGTTTGCTGG CCAGATCGATCG CCT CGAGCGATTTGG TATTCGTTACCAGTG Swoo_4324 5236336 - 5239242 + | SNF2-related protein TERM 5344 5239266 - 5239291 + F 100 -11.9 -5.49234 | opp_overlap 5239266 ACCTTGCTGTCTAAA GCCCCATAACT AAAT AGTTTTGGGGC TTTTTTATTGCCTAT TERM 5345 5239291 - 5239266 - f 90 -11.9 -3.53091 | opp_overlap 5239266 ACCTTGCTGTCTAAA GCCCCATAACT AAAT AGTTTTGGGGC TTTTTTATTGCCTAT TERM 5346 5240005 - 5239974 - g 80 -11.8 -2.9348 | CCTAAACCTGACATA TTAGTGCTCATCAA TCCC TTTATGAGCACTAA AACAGAAAATATGGC Swoo_4325 5239362 - 5240255 + | hypothetical protein Swoo_4326 5240772 - 5240275 - | hypothetical protein Swoo_4327 5241805 - 5240906 - | enoyl-CoA hydratase/isomerase TERM 5347 5242373 - 5242396 + G 72 -7.6 -4.15222 | gap 1, opp_overlap 5242371 5242373 5242379 AAGGCACATGAAAGA GT-TAAAGCAC TAG GTGCTTTAGAC TTTATTCAAAAACCT TERM 5348 5242682 - 5242696 + G 76 -7.8 -4.24342 | overlap 5242664 CACAGTAAAGTCTCT GCTCTG TGT CAGGGC TTTATTGGTGCAGGC Swoo_4328 5242097 - 5243092 + | CheC, inhibitor of MCP methylation Swoo_4329 5243106 - 5244068 + | diguanylate cyclase TERM 5349 5244092 - 5244121 + T 100 -15.3 -4.07306 | opp_overlap 5244098, overlap 5244098 ACCATTGACTCCCAA TAAAAATGCCCAT CAAG ATGGGCATTTTTA TTTATAATTCAATCT TERM 5350 5244115 - 5244098 - T 93 -9.9 -5.07486 | opp_overlap 5244098 5244092 GACTCCCAATAAAAA TGCCCAT CAAG ATGGGCA TTTTTATTTATAATT TERM 5351 5244098 - 5244115 + T 100 -9.9 -5.4182 | opp_overlap 5244098, overlap 5244092 GACTCCCAATAAAAA TGCCCAT CAAG ATGGGCA TTTTTATTTATAATT Swoo_4330 5244574 - 5244140 - | hypothetical protein TERM 5352 5244663 - 5244681 + r 79 -8.8 -3.92373 | opp_overlap 5244663 TACAGACACAAAAAA GCCCCCAT AAA ATGGAGGC TTTATCACTAAACTG TERM 5353 5244681 - 5244663 - R 100 -11 -5.4492 | opp_overlap 5244663 TACAGACACAAAAAA GCCCCCAT AAA ATGGAGGC TTTATCACTAAACTG Swoo_4331 5245426 - 5244704 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 5354 5245401 - 5245376 - G 70 -2.6 -4.92756 | overlap 5245378 ACCACCAAAAACAAA TGCTAGCAGT AACATA ACTGCTAAAA CTAACGATCTAAGGA Swoo_4332 5246372 - 5245575 - | ABC-3 protein TERM 5355 5246341 - 5246321 - G 91 -9.7 -4.75518 | TAGACAAAACCAAAA TCCCCGC AACAAAG GCGGGGA ATAGGATTGAGAGTA TERM 5356 5246426 - 5246403 - R 80 -11 -3.16534 | overlap 5246393 AGTAAGTAGAGTCAA TCTCGGCCCT AGAT AGCGCCGAGA TCTACGCTAAGGGCT Swoo_4333 5247352 - 5246441 - | periplasmic solute binding protein TERM 5357 5246927 - 5246914 - G 70 -6.7 -4.11692 | CAGCGACCTTTAAAA CTCTC AGTG GAGAG AAGTGAAGATGCGGG Swoo_4334 5248547 - 5247336 - | hypothetical protein Swoo_4335 5249093 - 5248803 - | hypothetical protein Swoo_4336 5249358 - 5249483 + | hypothetical protein Swoo_4337 5250078 - 5249686 - | hypothetical protein Swoo_4338 5250188 - 5251789 + | MscS mechanosensitive ion channel TERM 5358 5251855 - 5251831 - T 100 -17.2 -4.94902 | opp_overlap 5251831 CAATCAGTATAAAAA GGGGCCGGAT CTGAT ATCCGGCCCC TTTTTTAAACGGTAA TERM 5359 5251831 - 5251855 + T 100 -17.2 -5.02074 | opp_overlap 5251831 CAATCAGTATAAAAA GGGGCCGGAT CTGAT ATCCGGCCCC TTTTTTAAACGGTAA Swoo_4339 5253596 - 5251884 - | formate--tetrahydrofolate ligase Swoo_4340 5253809 - 5254705 + | aldo/keto reductase TERM 5360 5254727 - 5254747 + T 89 -12.5 -2.53876 | opp_overlap 5254729 TTAATACAAATGAAA AAGGGCGCC ATC GGCGCCCTC TCAATTACACTAGCG TERM 5361 5254745 - 5254729 - T 100 -15.1 -5.08367 | opp_overlap 5254727 AATACAAATGAAAAA GGGCGCC ATC GGCGCCC TCTCAATTACACTAG Swoo_4341 5255659 - 5254775 - | dehydratase TERM 5362 5255615 - 5255601 - G 77 -10 -3.43676 | overlap 5255599 TATAGGGAAAACAGA GAAGGC ATC GCCTTC AGTTCAACCAAATAT Swoo_4342 5256447 - 5255818 - | hypothetical protein TERM 5363 5256627 - 5256606 - R 79 -10.9 -2.9186 | overlap 5256612 ATTTAAGTCGATATA GGAGAAGAG GAGC CTCTTCCCC CCTAAACGATGTTCA Swoo_4343 5257624 - 5256740 - | GumN family protein Swoo_4344 5257676 - 5257987 + | hypothetical protein TERM 5364 5258887 - 5258864 - g 83 -6 -5.17353 | gap 1, overlap 5258865 AGACCCAGTAAAAAA GCAGATAC-GC TAC GCAGAATCTGC AGAAAGTCTCTGTAA TERM 5365 5258967 - 5258942 - g 85 -11.3 -3.52506 | overlap 5258940 AACCAAATTGAAACA GTTAAGCGATA TTTT TATCGCTCAAC CCAGCCTACAGAGTA TERM 5366 5259803 - 5259771 - g 100 -13.6 -5.47218 | opp_overlap 5259771 GCGGATGCAAAAAAA CAGGCTAAAAAAGC GGTGA GCTCCTTTAGCCTG TTATGATATCAATCA TERM 5367 5259771 - 5259803 + G 73 -9.2 -3.47573 | opp_overlap 5259771 GCGGATGCAAAAAAA CAGGCTAAAAAAGC GGTGA GCTCCTTTAGCCTG TTATGATATCAATCA Swoo_4345 5258091 - 5259809 + | diguanylate cyclase/phosphodiesterase Swoo_4346 5260366 - 5259842 - | hypothetical protein TERM 5368 5260713 - 5260694 - g 74 -4.2 -5.01811 | overlap 5260697 CCAGCAAACCAAAAA GAGCAGCC CGAG AGCTGGTC ATCATTTGTCTATAC Swoo_4347 5260604 - 5260909 + | hypothetical protein Swoo_4348 5260995 - 5261174 + | hypothetical protein Swoo_4349 5261708 - 5262022 + | hypothetical protein TERM 5369 5262086 - 5262049 - T 78 -10.7 -3.10255 | gap 1, opp_overlap 5262059, overlap 5262054 5262059 ATAACATCCATTTAA GCACA-TAAAAGCGAGGC TAG ACCCCGCTTTTATTGAGC TGTGGAGTGAACTAA TERM 5370 5262080 - 5262054 - T 87 -12.4 -2.92371 | opp_overlap 5262059, overlap 5262049 5262059 ATCCATTTAAGCACA TAAAAGCGAGGC TAG ACCCCGCTTTTA TTGAGCTGTGGAGTG TERM 5371 5262075 - 5262059 - T 83 -7.9 -4.614 | opp_overlap 5262059, overlap 5262054 5262049 TTTAAGCACATAAAA GCGAGGC TAG ACCCCGC TTTTATTGAGCTGTG TERM 5372 5262059 - 5262075 + T 70 -5 -4.66987 | opp_overlap 5262054 5262049 5262059 TTTAAGCACATAAAA GCGAGG CTAGA CCCCGC TTTTATTGAGCTGTG Swoo_4350 5262607 - 5262098 - | hypothetical protein Swoo_4351 5262760 - 5263161 + | hypothetical protein Swoo_4352 5263328 - 5264125 + | response regulator receiver protein TERM 5373 5264489 - 5264501 + F 76 -9.1 -3.77087 | GAAAGGGGTTTTCTA GGGCT TAA AGCCC TTTCCATATTGAATA Swoo_4353 5264601 - 5264873 + | histone family protein DNA-binding protein TERM 5374 5264914 - 5264901 - f 91 -8.1 -5.06414 | opp_overlap 5264901 CCGTTTTAATAAAAA CCTCC TAAT GGAGG TTTTTTTGTGCCTGC TERM 5375 5264901 - 5264914 + F 100 -8.1 -5.64274 | opp_overlap 5264901 CCGTTTTAATAAAAA CCTCC TAAT GGAGG TTTTTTTGTGCCTGC TERM 5376 5265341 - 5265327 - g 80 -10 -3.78953 | opp_overlap 5265326 5265325 ATTTTGATGATGAAA CCAGCT ATG AGCTGG ACTTCTACGCTGGTT Swoo_4354 5265104 - 5265793 + | hypothetical protein TERM 5377 5265880 - 5265842 - f 100 -13.3 -4.53705 | opp_overlap 5265845 AATTGTGATATAAAA CAAGATGAGCGCCTACT AAACA AGCAGGTACTCATCTTG TAAAAATACAATAAA Swoo_4355 5266188 - 5266361 + | hypothetical protein TERM 5378 5266371 - 5266410 + T 80 -10.9 -3.13403 | opp_overlap 5266362 5266382, overlap 5266369 5266374 TACTAAGCCACCTTT TGATGACTGAATCTAGG CGAAGA CCTAGATTCAGACATAA TATTCCTAGCCCCAA TERM 5379 5266374 - 5266407 + T 90 -12.6 -2.77523 | opp_overlap 5266362 5266382, overlap 5266371 5266369 TAAGCCACCTTTTGA TGACTGAATCTAGG CGAAGA CCTAGATTCAGACA TAATATTCCTAGCCC Swoo_4356 5266815 - 5266468 - | hypothetical protein TERM 5380 5266639 - 5266656 + g 70 -5.5 -4.40993 | opp_overlap 5266638 CAACGGCCCATTAAT GGAAGTG GAAC CACCTCC TTTTAGTCGTTTATA TERM 5381 5266985 - 5266958 - R 72 -2 -5.21236 | opp_overlap 5266962 5266963, overlap 5266962 5266963 AACTTACAATAAAAA TACATTCCGATC ATTC AATCGGACTCTA TTCTGGGTAACCCGT Swoo_4357 5268569 - 5266983 - | carbohydrate kinase FGGY TERM 5382 5268191 - 5268177 - G 70 -10 -2.63089 | overlap 5268174 5268176 CATCAGCTTAAACAG GGGATC CCA GATCCC ACCTAAACGTGGAAG Swoo_4358 5270133 - 5268562 - | FAD dependent oxidoreductase Swoo_4359 5271809 - 5270130 - | alkylglycerone-phosphate synthase TERM 5383 5271975 - 5271985 + G 72 -5.4 -4.56775 | CCACCTCTATGCCGC CTGT ACA ACAG TTTTTGCAGGCAGCT TERM 5384 5272375 - 5272393 + G 70 -7.4 -3.94664 | CCTTATCGATAACGT GTTGGCCT CTT GGGTCAAC TTTGCTCGTTTTCTG TERM 5385 5272937 - 5272918 - g 71 -7.8 -3.78934 | CCGTGCCTACAAGAA CTGGAGCG GACA CTCTCCAG GAGTTAAGCGATTAA Swoo_4360 5271920 - 5272957 + | AraC family transcriptional regulator Swoo_4361 5273052 - 5273993 + | secretion protein HlyD family protein TERM 5386 5274451 - 5274437 - g 81 -6.4 -4.91511 | AGCGGAGGACAAAAA CAGCGA CTA TCACTG GCCTGTGCCTGCCTT Swoo_4362 5273993 - 5274961 + | ABC transporter related Swoo_4363 5274963 - 5276066 + | ABC-2 type transporter TERM 5387 5276090 - 5276077 - T 100 -9.5 -5.28778 | opp_overlap 5276077 ATTAGCTATAAAAAA GCGCC TTTC GGCGC TTTATTTTCAAGTAT TERM 5388 5276077 - 5276090 + T 88 -9.5 -4.67651 | opp_overlap 5276077 ATTAGCTATAAAAAA GCGCC TTTC GGCGC TTTATTTTCAAGTAT Swoo_4364 5277496 - 5276117 - | amino acid carrier protein Swoo_4365 5279457 - 5277631 - | glycoside hydrolase family 3 protein Swoo_4366 5281689 - 5279458 - | glycoside hydrolase family 3 protein TERM 5389 5281415 - 5281396 - G 71 -8.6 -3.55548 | gap 1 GAATATGGTTTTAAA GCCGTGGAT CAC ATCC-CGGC CAATCAACAGAGGTA TERM 5390 5281738 - 5281723 - H 70 -2.6 -5.14563 | GCGCTCAGCAAAAAA TGACTA TCAT TAATCA TATGCTGACTTAAGT TERM 5391 5281781 - 5281770 - H 78 -7.2 -4.39407 | opp_overlap 5281769 CCAAACAACTCAAAA CCGC TCAA GCGG ACTCTATTTGAGATA TERM 5392 5282201 - 5282216 + G 78 -6 -4.64992 | opp_overlap 5282192 5282200 5282199, overlap 5282200 5282200 CAGCAAGACGAAATG GGGACG TCGT CGCCCC TTTATCTTTTTTGGA Swoo_4367 5281950 - 5283431 + | major facilitator transporter Swoo_4368 5283642 - 5284190 + | hypothetical protein TERM 5393 5285175 - 5285151 - g 77 -11.4 -2.63637 | overlap 5285150 AAACGCAACACGAAT GGCCAGAGGT TAACT ACCACTGGCC CGATGGAATGCCCCG TERM 5394 5285739 - 5285706 - g 76 -8.3 -3.98775 | gap 1, opp_overlap 5285705 5285715 ACAAACTCAACCAAA CGACAACAGAGTATCA TTA TGATAC-CTATGGTCG ACTTGTTGGTGTCGA Swoo_4369 5284265 - 5286304 + | hypothetical protein Swoo_4370 5286304 - 5288913 + | YD repeat-containing protein TERM 5395 5289181 - 5289148 - g 93 -11.9 -4.10672 | opp_overlap 5289147 5289146 TCAAGTGAAATCAAA TGAAGAGCTTGCT GGATATTT AGCAAGCTCTCCA GATTTCAATGTTTGG Swoo_4371 5288933 - 5289358 + | hypothetical protein TERM 5396 5289805 - 5289817 + T 74 -7.7 -4.02302 | opp_overlap 5289805 5289804 5289802, overlap 5289802 TAGAAAAACAGATAC TCAGC CTT GCTGA TATTTTTGCTATCGA TERM 5397 5290439 - 5290470 + T 89 -3.9 -5.74288 | TGGTAAGCGAAGACA TCCATAATTAATT TTGAGT AAATAGTTATGGA TTTTTTGTTGTTTGT Swoo_4373 5290670 - 5290524 - | hypothetical protein TERM 5398 5290634 - 5290661 + g 84 -7.2 -5.0133 | opp_overlap 5290624 5290639, overlap 5290624 CAAATTTCAACTCCA TTGAATGTTCAT TTGC ATAAACATTCAA TTTTTTCAAAAAATA TERM 5399 5290939 - 5290924 - R 83 -7.6 -4.63526 | opp_overlap 5290923 ATAACCATAAATAAA CCCTTA CAGA TAAGGG GATGTTTAAACTTTC TERM 5400 5291123 - 5291085 - R 100 -18.4 -4.32951 | opp_overlap 5291092, overlap 5291092 AAAGAATATCGAAAA CAAAAAAGGATTGACGAG TGA CTCGTCAATCCTTTGCTG GTAATGGCAGAAAGC TERM 5401 5291092 - 5291116 + r 100 -17.3 -3.80573 | opp_overlap 5291085 5291092 ATCGAAAACAAAAAA GGATTGACGAG TGA CTCGTCAATCC TTTGCTGGTAATGGC TERM 5402 5291116 - 5291092 - R 100 -17.3 -5.80951 | opp_overlap 5291092, overlap 5291085 ATCGAAAACAAAAAA GGATTGACGAG TGA CTCGTCAATCC TTTGCTGGTAATGGC Swoo_4374 5293387 - 5291192 - | Ig family protein TERM 5403 5293646 - 5293673 + r 100 -15.6 -4.30833 | opp_overlap 5293646 TAATGATTAAAAAAA TGGGGGCAAAGC TTAC GCCTTGCCCCCA TTTATTACTGATTTA TERM 5404 5293673 - 5293646 - R 100 -17.8 -5.58074 | opp_overlap 5293646 TAATGATTAAAAAAA TGGGGGCAAAGC TTAC GCCTTGCCCCCA TTTATTACTGATTTA Swoo_4375 5296688 - 5293692 - | TonB-dependent receptor plug Swoo_4376 5299506 - 5296768 - | glucan endo-1,3-beta-D-glucosidase TERM 5405 5300983 - 5300953 - g 71 -9.9 -3.12874 | overlap 5300977 ATAGACATTATGGAA CATGTAGGTTTTG ATATG CAAAACGTACATG GCACAGTACACAACA Swoo_4377 5299912 - 5301321 + | glycoside hydrolase family protein Swoo_4378 5301404 - 5304847 + | hypothetical protein Swoo_4379 5304888 - 5305775 + | glycoside hydrolase family protein TERM 5406 5306010 - 5305996 - g 76 -5.6 -4.75174 | opp_overlap 5306003 GATGTAATCCAAAAA GAGGGC TTC GCCTTC AAGGTGATGCTTGGC TERM 5407 5306124 - 5306103 - g 86 -2.3 -5.63504 | overlap 5306107 AACTCTACAAAAAAA CCAAGCTAA TAAT TTAGCTCAA ATAAACAAGCTAATT Swoo_4380 5305807 - 5306772 + | glycoside hydrolase family protein Swoo_4381 5306844 - 5307977 + | signal transduction histidine kinase, LytS Swoo_4382 5308005 - 5308826 + | LytTR family two component transcriptional regulator Swoo_4383 5310028 - 5308937 - | hypothetical protein Swoo_4384 5311428 - 5310172 - | major facilitator transporter Swoo_4385 5312685 - 5311675 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 5408 5312651 - 5312662 + g 77 -7.2 -4.329 | GCCAAACGTCCCATG CGGC CAAA GCCG TTTATTCCTATCTTG Swoo_4386 5313846 - 5312782 - | arsenical-resistance protein Swoo_4387 5314273 - 5313926 - | ArsR family transcriptional regulator TERM 5409 5314345 - 5314302 - R 81 -9.2 -3.91821 | opp_overlap 5314302 5314307 5314311 5314318, overlap 5314295 5314307 5314309 5314311 TAAAAATATCAACAA CCAGATATATGGATAATCAT ATAT ATGATTATCCATATATGCAA ATTTGAATTTAGAGG TERM 5410 5314340 - 5314307 - R 100 -15.7 -3.03605 | opp_overlap 5314302 5314307 5314311 5314318, overlap 5314302 5314295 5314309 5314311 ATATCAACAACCAGA TATATGGATAATCAT ATAT ATGATTATCCATATA TGCAAATTTGAATTT TERM 5411 5314338 - 5314309 - R 95 -13.9 -3.06573 | opp_overlap 5314307 5314302 5314311 5314318, overlap 5314307 5314302 5314295 5314311 ATCAACAACCAGATA TATGGATAATCAT ATAT ATGATTATCCATA TATGCAAATTTGAAT TERM 5412 5314336 - 5314311 - R 87 -12.1 -3.08176 | opp_overlap 5314307 5314302 5314311 5314318, overlap 5314309 5314307 5314302 5314295 CAACAACCAGATATA TGGATAATCAT ATAT ATGATTATCCA TATATGCAAATTTGA TERM 5413 5314311 - 5314336 + r 87 -12.1 -2.90714 | opp_overlap 5314311 5314309 5314307 5314302 5314295, overlap 5314307 5314302 5314318 CAACAACCAGATATA TGGATAATCAT ATAT ATGATTATCCA TATATGCAAATTTGA TERM 5414 5314487 - 5314468 - R 73 -6.4 -4.23732 | opp_overlap 5314467 TAAAGATAAAGCAAA GAAAGCCC AAAA GGTCTTTC AATTACTCTGAATAT Swoo_4388 5315971 - 5314631 - | peptidase U62 modulator of DNA gyrase Swoo_4389 5316223 - 5316762 + | hypothetical protein TERM 5415 5317635 - 5317665 + G 76 -8.4 -3.86346 | opp_overlap 5317642, overlap 5317638 5317639 TTGCAAAGGATGCTG TAAGCGATGACGGT ATT ATCGTCATTGGTTA TTTCTCAGAAGATGG Swoo_4390 5316845 - 5319376 + | Ig domain-containing protein TERM 5416 5319411 - 5319438 + T 100 -15.8 -5.24796 | opp_overlap 5319411, overlap 5319401 GGTAAGTGCTAAAAA GCCCATTTAGAT ACAG ATCTAAATGGGC TTTTTGTTATCTCAA TERM 5417 5319438 - 5319411 - T 100 -15.8 -4.62471 | opp_overlap 5319401 5319411 GGTAAGTGCTAAAAA GCCCATTTAGAT ACAG ATCTAAATGGGC TTTTTGTTATCTCAA Swoo_4391 5320637 - 5319483 - | ABC-2 type transporter Swoo_4392 5321788 - 5320634 - | ABC-2 type transporter Swoo_4393 5322774 - 5321803 - | secretion protein HlyD family protein Swoo_4394 5324171 - 5322774 - | outer membrane efflux protein TERM 5418 5324251 - 5324276 + r 73 -4.1 -5.05782 | gap 1, opp_overlap 5324242 5324254 5324255, overlap 5324242 5324254 5324254 5324255 ATCCAATCAGGTTAT CAAC-CTAATGC TTT GCATTAGCGTTA TTTTTTAGCCTAGAT TERM 5419 5324254 - 5324273 + r 74 -5.8 -4.63089 | gap 1, opp_overlap 5324242 5324254 5324255, overlap 5324242 5324251 5324254 5324255 CAATCAGGTTATCAA C-CTAATGC TTT GCATTAGCG TTATTTTTTAGCCTA TERM 5420 5324271 - 5324255 - R 71 -9.5 -2.50291 | opp_overlap 5324242 5324254 5324254 5324251 5324255, overlap 5324242 5324254 AATCAGGTTATCAAC CTAATGC TTT GCATTAG CGTTATTTTTTAGCC TERM 5421 5324255 - 5324271 + r 71 -9.5 -2.60977 | opp_overlap 5324242 5324255 5324254, overlap 5324242 5324254 5324254 5324251 AATCAGGTTATCAAC CTAATGC TTT GCATTAG CGTTATTTTTTAGCC Swoo_4395 5325839 - 5324391 - | peptidase U62 modulator of DNA gyrase Swoo_4396 5326657 - 5325923 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Swoo_4397 5330870 - 5326692 - | hypothetical protein TERM 5422 5330619 - 5330636 + g 80 -5.5 -5.03314 | GAAGGGAAGCTTATC TTGGGGC GGAA GCACCAA TTTTTTAACGGTCAG Swoo_4398 5332372 - 5330870 - | ribonuclease TERM 5423 5331732 - 5331715 - G 72 -7.7 -3.91072 | overlap 5331722 CCAAATCTTGATAAA GCAGAGA CACA CCTCTGC GCTTGCGTCGCTCGC Swoo_4399 5333077 - 5332460 - | maf protein Swoo_4400 5333567 - 5333079 - | rod shape-determining protein MreD Swoo_4401 5334460 - 5333564 - | rod shape-determining protein MreC TERM 5424 5334546 - 5334514 - R 80 -10 -3.54771 | opp_overlap 5334522, overlap 5334515 5334522 CTTACAACATGATAA TTAAAAAAGGCGGT GAAGT ACCGCCTTTTCTAC ATCGATTAGTTCTCT TERM 5425 5334545 - 5334515 - R 91 -13.5 -2.72381 | opp_overlap 5334522, overlap 5334514 5334522 TTACAACATGATAAT TAAAAAAGGCGGT GAAGT ACCGCCTTTTCTA CATCGATTAGTTCTC TERM 5426 5334522 - 5334538 + r 89 -10.1 -4.43501 | opp_overlap 5334522 5334515 5334514 ATGATAATTAAAAAA GGCGGTG AAG TACCGCC TTTTCTACATCGATT TERM 5427 5334538 - 5334522 - R 100 -9.4 -5.33848 | opp_overlap 5334522, overlap 5334515 5334514 ATGATAATTAAAAAA GGCGGT GAAGT ACCGCC TTTTCTACATCGATT Swoo_4402 5335601 - 5334552 - | cell shape determining protein MreB TERM 5428 5335696 - 5335710 + r 71 -4.3 -4.74787 | TGTTGAGGTTAACAT TTGCT AATGA AGCAA TTTATTTCTGTTTAT TERM 5429 5335723 - 5335762 + r 72 -5.3 -4.64844 | gap 2, opp_overlap 5335734, overlap 5335727 5335728 5335734 5335759 CAATTTATTTCTGTT TATCATGAAAATGACCACT AAAA AGTGGCCATTTTC--GATA TTTTATCTATCTAGA TERM 5430 5335727 - 5335760 + r 74 -7.5 -3.9328 | opp_overlap 5335734, overlap 5335723 5335728 5335734 5335759 TTATTTCTGTTTATC ATGAAAATGACCACT AAAA AGTGGCCATTTTCGA TATTTTATCTATCTA TERM 5431 5335728 - 5335759 + r 79 -11 -2.94884 | opp_overlap 5335734, overlap 5335727 5335723 5335734 TATTTCTGTTTATCA TGAAAATGACCACT AAAA AGTGGCCATTTTCG ATATTTTATCTATCT TERM 5432 5335734 - 5335753 + r 75 -6.4 -4.36485 | opp_overlap 5335734, overlap 5335728 5335727 5335723 TGTTTATCATGAAAA TGACCACT AAAA AGTGGCCA TTTTCGATATTTTAT TERM 5433 5335753 - 5335734 - R 83 -8.6 -4.30576 | opp_overlap 5335734 5335728 5335727 5335723 TGTTTATCATGAAAA TGACCACT AAAA AGTGGCCA TTTTCGATATTTTAT Swoo_4403 5340235 - 5335844 - | hypothetical protein Swoo_4404 5340731 - 5340228 - | MSHA biogenesis protein MshP TERM 5434 5340551 - 5340535 - G 73 -6.5 -4.30576 | opp_overlap 5340538 TTTGCAGCAGCAAAA GCACGGG TTC CCCATAC TTCCAAGTTTACCTG Swoo_4405 5341554 - 5340721 - | methylation site containing protein Swoo_4406 5342108 - 5341554 - | methylation site containing protein Swoo_4407 5342562 - 5342098 - | MSHA pilin protein MshC TERM 5435 5342708 - 5342693 - R 83 -6.8 -5.1634 | opp_overlap 5342693, overlap 5342687 ATAAACAGAGAAAAA GGCCCT AAGA AAGGCC TTTCGCAAATAAGAT Swoo_4408 5343264 - 5342752 - | MSHA pilin protein MshA TERM 5436 5343509 - 5343493 - R 100 -13.7 -5.4251 | opp_overlap 5343493 TTCAGACACAAAAAA GGCCTGC ATT GCAGGCC TTTTTATCACGTTAA TERM 5437 5343493 - 5343509 + r 100 -13.7 -4.87786 | opp_overlap 5343493 TTCAGACACAAAAAA GGCCTGC ATT GCAGGCC TTTTTATCACGTTAA Swoo_4409 5344028 - 5343528 - | methylation site containing protein Swoo_4410 5344561 - 5344034 - | methylation site containing protein TERM 5438 5344601 - 5344582 - R 81 -6.6 -4.98522 | opp_overlap 5344581 AACCTCATATAAAAA CTATATAA CTCT TTATATAG CTAAATTTTCTACAA Swoo_4411 5345454 - 5344795 - | methylation site containing protein Swoo_4412 5346040 - 5345525 - | hypothetical protein Swoo_4413 5347287 - 5346067 - | type II secretion system protein TERM 5439 5346247 - 5346224 - G 71 -3.8 -4.82901 | opp_overlap 5346224 5346227 5346244 TCCCCTTCATAAAAA TCCGCTGC GTCATTTA GCAGCTGA TCTATCTGACCAGTC Swoo_4414 5349111 - 5347354 - | type II secretion system protein E Swoo_4415 5350301 - 5349108 - | TPR repeat-containing protein Swoo_4416 5351206 - 5350298 - | MSHA biogenesis protein MshM Swoo_4417 5352898 - 5351210 - | pilus (MSHA type) biogenesis protein MshL Swoo_4418 5353235 - 5352885 - | MSHA biogenesis protein MshK Swoo_4419 5353872 - 5353216 - | MSHA biogenesis protein MshJ Swoo_4420 5354471 - 5353869 - | fimbrial assembly family protein Swoo_4421 5355373 - 5354468 - | biogenesis protein MshI Swoo_4422 5357644 - 5355731 - | diguanylate cyclase/phosphodiesterase TERM 5440 5357580 - 5357570 - G 74 -5.4 -4.72272 | overlap 5357576 TGCTGTCAGTAAAAA TAGC AAG GCTA CCGCAGCCAATGAGA TERM 5441 5357873 - 5357886 + r 82 -9.5 -4.13767 | opp_overlap 5357873 ATGGTCAAATAAAAA GGGCC ATAA GGCCC TTTTAGAGTAGAAGC TERM 5442 5357886 - 5357873 - R 100 -9.5 -5.27938 | opp_overlap 5357873 ATGGTCAAATAAAAA GGGCC ATAA GGCCC TTTTAGAGTAGAAGC Swoo_4423 5359158 - 5357911 - | malate dehydrogenase TERM 5443 5359630 - 5359601 - R 90 -11.5 -4.03234 | opp_overlap 5359607, overlap 5359607 CCTGCCCCAGACAAA CAAAAAGGCGCCC TAAT AGGCGCCTTTTTT AAATTCAATATGTAA TERM 5444 5359624 - 5359607 - R 100 -10.5 -5.42975 | opp_overlap 5359607, overlap 5359601 CCAGACAAACAAAAA GGCGCCC TAAT AGGCGCC TTTTTTAAATTCAAT TERM 5445 5359607 - 5359624 + r 93 -9.8 -5.16572 | opp_overlap 5359607 5359601 CCAGACAAACAAAAA GGCGCC CTAATA GGCGCC TTTTTTAAATTCAAT Swoo_4424 5359867 - 5359655 - | ribosomal protein L31 Swoo_4425 5360776 - 5360057 - | hypothetical protein Swoo_4426 5360935 - 5363130 + | primosomal protein N' TERM 5446 5363731 - 5363705 - g 74 -9.4 -3.42283 | opp_overlap 5363704 5363703, overlap 5363703 5363707 TAACCTAGCCAAAGA GATGCACGTAGG CCA CCTACGTTCAAC GATTATCGGTGACAG TERM 5447 5363729 - 5363707 - g 80 -10.6 -3.27676 | opp_overlap 5363704 5363703, overlap 5363705 5363703 ACCTAGCCAAAGAGA TGCACGTAGG CCA CCTACGTTCA ACGATTATCGGTGAC Swoo_4427 5363313 - 5365058 + | arginyl-tRNA synthetase TERM 5448 5365078 - 5365108 + F 73 -9.8 -2.53876 | overlap 5365082 GCGAATAACCTTGTC GATACCTAGCGTGT TAA AAGTGCTAGGTATC TAAGTTCGCGTAACA TERM 5449 5365401 - 5365389 - g 72 -3.4 -5.00884 | ACGGTTGTCAAAAAA GATC CCAAC GATC TCCCTCCTAAACCTA Swoo_4428 5365164 - 5365736 + | sporulation domain-containing protein TERM 5450 5365804 - 5365763 - f 74 -9.7 -2.72961 | gap 1, opp_overlap 5365767 5365770, overlap 5365760 ATAGTAAATAATTTA TCAGTGG-TGGCTATCTAAA CGA CTTAGATAGCCATCCATTAA TCCCATCTCCGATTT TERM 5451 5365767 - 5365800 + F 87 -12 -3.17763 | gap 1, opp_overlap 5365763 5365760, overlap 5365770 TAAATAATTTATCAG TGG-TGGCTATCTAA ACGAC TTAGATAGCCATCCA TTAATCCCATCTCCG TERM 5452 5365770 - 5365796 + F 89 -12.5 -2.56914 | opp_overlap 5365763 5365760, overlap 5365767 ATAATTTATCAGTGG TGGCTATCTAA ACGAC TTAGATAGCCA TCCATTAATCCCATC Swoo_4429 5365925 - 5366449 + | 20S proteasome A and B subunits Swoo_4430 5366507 - 5367832 + | heat shock protein HslVU, ATPase subunit HslU Swoo_4431 5368192 - 5368587 + | hypothetical protein TERM 5453 5368673 - 5368687 + T 80 -10 -3.6502 | CCTAACTTTTCTCGT TGCCAC GCA GTGGCA TTTAAATAGCGGATA Swoo_4432 5368883 - 5368713 - | hypothetical protein Swoo_4433 5368964 - 5369434 + | hypothetical protein TERM 5454 5369483 - 5369506 + T 100 -15.4 -3.28912 | opp_overlap 5369483 TTTCCATACGAAAAA GCCCCAAGTA TTTC TACTTGGGGC TTCATCTGAATATGG TERM 5455 5369506 - 5369483 - T 100 -15.4 -4.8048 | opp_overlap 5369483 TTTCCATACGAAAAA GCCCCAAGTA TTTC TACTTGGGGC TTCATCTGAATATGG Swoo_4434 5370965 - 5369763 - | aromatic amino acid transporter TERM 5456 5371072 - 5371099 + H 78 -10.8 -2.71984 | gap 1, overlap 5371071 GACTTAAATTTACCT TTATCTAC-GCCA CTG TGGCTGTAGATAA CTTGTCATTAAATTA Swoo_4435 5371373 - 5371882 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Swoo_4436 5371968 - 5372396 + | hypothetical protein Swoo_4437 5372627 - 5372403 - | hypothetical protein Swoo_4438 5374153 - 5372723 - | GntR family transcriptional regulator TERM 5457 5373142 - 5373124 - G 83 -11.8 -3.14132 | TTGGCTCTTCAGCAA CAGTTTGC TTA GCAAACTG ACACTGGGAAAAGGT TERM 5458 5373911 - 5373929 + g 76 -3.9 -5.14563 | gap 1 GATACTGTGGCCATA GTCAGGCT GTTT AGC-TGAC TTTTTTGATACCACA Swoo_4439 5374262 - 5374789 + | GCN5-related N-acetyltransferase TERM 5459 5374872 - 5374884 + G 80 -6.3 -4.74917 | opp_overlap 5374872 AACTACATTAGCAGA TACAG GCT CTGTA TTTTCTCTATTTAGT Swoo_4440 5374786 - 5375379 + | GCN5-related N-acetyltransferase Swoo_4441 5375554 - 5377518 + | methyl-accepting chemotaxis sensory transducer TERM 5460 5377532 - 5377570 + T 100 -22 -3.21593 | opp_overlap 5377538, overlap 5377538 AGCATTTATAAGGAT GAACAAGGGTGTAGAGCT TAA AGCTCTACACCCTTTTTC TATTCTGGAGCAATA TERM 5461 5377538 - 5377564 + T 100 -19.6 -5.1523 | opp_overlap 5377538, overlap 5377532 TATAAGGATGAACAA GGGTGTAGAGCT TAA AGCTCTACACCC TTTTTCTATTCTGGA TERM 5462 5377564 - 5377538 - T 100 -19.6 -3.78793 | opp_overlap 5377538 5377532 TATAAGGATGAACAA GGGTGTAGAGCT TAA AGCTCTACACCC TTTTTCTATTCTGGA TERM 5463 5377923 - 5377907 - T 91 -8.7 -4.87328 | opp_overlap 5377907 TATAGAAATAGAAAA GCATGCC AAT AGCATGC TTCAATGGATTAAGT Swoo_4442 5378971 - 5377997 - | response regulator receiver modulated CheW protein TERM 5464 5378310 - 5378289 - G 74 -10.9 -2.53759 | opp_overlap 5378289 5378286 5378287 AACATCTCCAACGCA TCACCACCA TCTT TGGCGGTGA TAATGTTATAGCCTG TERM 5465 5379164 - 5379176 + r 72 -7.7 -3.71873 | ATTCAACCACGGGGA GTAGC AGC GCTAC TTTACCTCTCGGTAG Swoo_4443 5379676 - 5379173 - | hypothetical protein TERM 5466 5379241 - 5379251 + g 100 -5.4 -5.71712 | opp_overlap 5379241 CTTGCCATTGATAAA TGGT GTG ACCA TTTTTTTGTATAGCA Swoo_4444 5380167 - 5381648 + | UbiD family decarboxylase TERM 5467 5381844 - 5381833 - g 70 -5.8 -4.4009 | opp_overlap 5381832 5381833 CGTTATGGGAGAAAA GGAC AAGC GTCC ATTCTCTATCGCATC Swoo_4445 5381702 - 5382412 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 5468 5382430 - 5382459 + T 100 -18.1 -4.91873 | opp_overlap 5382432 5382434 AAACACCGTCTATAG GAGACCTCAAACT TGTG AGTTTGAGGTCTC TTTTTAATTAGTCTA TERM 5469 5382457 - 5382432 - T 100 -14.9 -2.62735 | opp_overlap 5382430, overlap 5382434 ACACCGTCTATAGGA GACCTCAAACT TGTG AGTTTGAGGTC TCTTTTTAATTAGTC TERM 5470 5382455 - 5382434 - T 81 -11.7 -2.8547 | opp_overlap 5382430, overlap 5382432 ACCGTCTATAGGAGA CCTCAAACT TGTG AGTTTGAGG TCTCTTTTTAATTAG Swoo_4446 5383939 - 5382629 - | transcriptional regulator, CadC TERM 5471 5383415 - 5383387 - G 72 -9.6 -3.21622 | opp_overlap 5383385 5383380, overlap 5383379 ACATAGAGGGATGAA GCCTATCTTCCC CATCT GGGTAGATAAGC TGTGCATTCTCATTA Swoo_4447 5385055 - 5384207 - | copper ABC transporter, permease protein Swoo_4448 5386031 - 5385048 - | ABC transporter related TERM 5472 5385086 - 5385101 + g 74 -7.6 -4.24726 | opp_overlap 5385073 5385086 5385085 5385088, overlap 5385073 ACTGACTGGAAAGAC GAGTCA ATAT TGACTC TTTTGGCGTTATTCT TERM 5473 5385613 - 5385595 - G 76 -8.8 -3.87627 | GGCTCAGATAAAATA GCCTGAGC AAA ACCCAGGC GCTGCTTCATCCCTT TERM 5474 5385916 - 5385931 + g 72 -10.4 -2.92439 | opp_overlap 5385926, overlap 5385913 5385926 TTACCCGCCCCATTG TGGCCC AGAA GGGCCA TGGTTTGCCCCTGTT TERM 5475 5386056 - 5386038 - R 72 -2.3 -5.24531 | overlap 5386049 5386054 ATTTCCCATAAAAAA TCCCACC GAAAG AGAGGGA GTCACTCTCCACAAT Swoo_4449 5387364 - 5386021 - | carbohydrate-binding and sugar hydrolysis Swoo_4450 5387855 - 5387367 - | NosL family protein TERM 5476 5387903 - 5387890 - R 76 -5.3 -4.93547 | TTAATTAACGAAAAA GTTGA TAAC TCAAC ACCCTACCGGCACCT Swoo_4451 5388960 - 5388013 - | polysulphide reductase NrfD TERM 5477 5388237 - 5388227 - G 74 -6.8 -4.39386 | opp_overlap 5388233 TGGAAAGCATTAAAA GCAC TTT GTGC TCCCGCATTACCTGT Swoo_4452 5389685 - 5388963 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5478 5389685 - 5389708 + g 74 -3.9 -5.011 | overlap 5389687 TCACAGCATCCTCCA TCTATCAGC TACCTT GCTGATATA TTTTATTATTTAGCT TERM 5479 5389687 - 5389706 + r 71 -6.5 -4.11503 | overlap 5389685 ACAGCATCCTCCATC TATCAGC TACCTT GCTGATA TATTTTATTATTTAG Swoo_4453 5390460 - 5389756 - | TPR repeat-containing protein TERM 5480 5390147 - 5390167 + g 100 -9.7 -5.17744 | opp_overlap 5390129 ATCTCACTCTTAGGT TGCTCGCTA ACT TTGCGAGCA TTTTTATTGATATCT TERM 5481 5390254 - 5390240 - G 93 -11.4 -4.2828 | TCCCACTCACCAAAA CGCCCA ATC TGGGCG TACAGGCTCAAACAA Swoo_4454 5391293 - 5390502 - | peptidylprolyl isomerase FKBP-type Swoo_4455 5391807 - 5391376 - | rhodanese domain-containing protein TERM 5482 5391539 - 5391550 + g 74 -5.8 -4.6856 | overlap 5391538 5391537 ACTGCATCTTTGTTT GCTG GGAG CAGC TTTTTCCAATCTTTA TERM 5483 5391815 - 5391865 + r 100 -16.2 -3.69338 | overlap 5391860 5391864 TTCATCATCTTTTCT CTCTATTGCCTCGGCACTTATTGC GGT GCAATGCATGCCGAGGCGGTTGAG TTATTCAGCTTACTT Swoo_4456 5393905 - 5391875 - | cytochrome c, putative TERM 5484 5393785 - 5393796 + g 82 -7.2 -4.64766 | CGTATTCAGCCATCG CCGC TTTA GCGG TTTTTCCCATCTGAG TERM 5485 5394218 - 5394202 - g 76 -6.5 -4.56887 | CAAAAATGCACAAAA GCGGCTA TGG CAGCCAC TCTCAAGTTCAGCGC Swoo_4457 5394192 - 5394404 + | hypothetical protein Swoo_4458 5395602 - 5394574 - | methionine synthase vitamin-B12 independent Swoo_4459 5396608 - 5395631 - | hypothetical protein TERM 5486 5396028 - 5396051 + g 82 -8.9 -4.1899 | TCATTTGGTTGGTAT TCGACACCC AAAACA GGGTGTTGA TTTTCGGTGCGATAA TERM 5487 5397160 - 5397148 - g 74 -4.1 -4.95758 | overlap 5397158 AGCACATCATAAAAA TGGCA ATG TACCA TGGGAAATCGCCCCT TERM 5488 5397490 - 5397464 - g 83 -5.7 -5.22312 | opp_overlap 5397464 5397481 ATCGATATGAAAAAA GCCATTGGCTG CGCGT CAGCCTGCGGC ATTGTTATCGCACTC Swoo_4460 5396915 - 5397727 + | hypothetical protein Swoo_4461 5398033 - 5397863 - | hypothetical protein Swoo_4462 5398922 - 5398497 - | hypothetical protein Swoo_4463 5399472 - 5399035 - | GCN5-related N-acetyltransferase Swoo_4465 5401935 - 5400958 - | hypothetical protein Swoo_4466 5403019 - 5402444 - | hypothetical protein TERM 5489 5403070 - 5403102 + r 83 -7.7 -4.64144 | opp_overlap 5403069 5403071, overlap 5403071 5403097 AACAGCTTATTAAAC AGCAGCACCGATAAC CTT GTTATCACTGCTGCA TTTTTAAAAATTATT TERM 5490 5403071 - 5403101 + r 82 -11.2 -3.37402 | opp_overlap 5403071 5403069, overlap 5403070 5403097 ACAGCTTATTAAACA GCAGCACCGATAAC CTT GTTATCACTGCTGC ATTTTTAAAAATTAT TERM 5491 5403101 - 5403071 - R 100 -13.4 -3.46088 | opp_overlap 5403070 5403071 5403097, overlap 5403069 ACAGCTTATTAAACA GCAGCACCGATAAC CTT GTTATCACTGCTGC ATTTTTAAAAATTAT TERM 5492 5403481 - 5403503 + r 75 -8.4 -3.72576 | AGTCCTCCTTGCCCG GGTGTGGGAT GGA ATCCCACGAC TTTAGTCAGGCGCAG Swoo_4467 5404901 - 5403618 - | transcriptional regulator, CadC TERM 5493 5405026 - 5405007 - R 76 -7.1 -4.20084 | ATTATTGACGCAAAA TGGCCGC TATTGT GCGACCA ATCATCGCCACTGTT Swoo_4468 5405983 - 5405123 - | copper ABC transporter, permease protein Swoo_4469 5406875 - 5405967 - | ABC transporter related Swoo_4470 5408268 - 5406928 - | periplasmic copper-binding Swoo_4471 5408780 - 5408292 - | NosL family protein TERM 5494 5408804 - 5408848 + r 73 -10.2 -2.52491 | gap 1, overlap 5408803 CGAAATGCTTTCAGA CTAGCCCTTTAATTGCCTTGC AGGG GCGGTGTA-TTAAAGGGCTAG CTTACTCACTGTGTA Swoo_4472 5409960 - 5409013 - | polysulphide reductase NrfD TERM 5495 5409793 - 5409809 + g 85 -10.9 -3.80537 | opp_overlap 5409784 5409783 5409790 5409791, overlap 5409791 TGAAACCAAAGACGC CGCCTTT AAA AAAGGCG TATTTTCAGTTTGTT Swoo_4473 5410673 - 5409963 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Swoo_4474 5411491 - 5410772 - | hypothetical protein Swoo_4475 5412326 - 5411523 - | peptidylprolyl isomerase FKBP-type Swoo_4476 5412793 - 5412365 - | rhodanese domain-containing protein TERM 5496 5412494 - 5412518 + g 72 -7.1 -4.13692 | ATTACAAAGACGGTT TGCACAGTAGA AGA TCATCTGTGCA TCTTTGTTTTTTGGC TERM 5497 5412838 - 5412811 - R 100 -15 -2.70932 | opp_overlap 5412807 5412805 TTTCTCTCTTAATTA CCTCAACCTAGG CGCA CCTAAGTTGAGG TCGGTATTAACTCAA Swoo_4477 5414890 - 5412854 - | cytochrome c, putative TERM 5498 5415311 - 5415346 + H 78 -10.1 -3.22475 | opp_overlap 5415306 5415311, overlap 5415309 TTAAATAGATTAAAA GCTGTTTAATATTAT CAATCA ATAATATTAAATAGC TATTATCAAAATAAA TERM 5499 5415346 - 5415311 - H 84 -8.6 -4.46493 | opp_overlap 5415311 5415309, overlap 5415306 TTAAATAGATTAAAA GCTGTTTAATATTATC AATC AATAATATTAAATAGC TATTATCAAAATAAA TERM 5500 5417321 - 5417336 + G 77 -6.8 -4.59109 | TGATGATGATGCTAG GCGGCA CAAT TGCTGC TTTTTCAGCCCTATA Swoo_4478 5415454 - 5417430 + | cytochrome c-type biogenesis protein CcmF Swoo_4479 5417427 - 5417876 + | cytochrome C biogenesis protein Swoo_4480 5417869 - 5418453 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 5501 5418467 - 5418494 + T 78 -7 -4.37092 | opp_overlap 5418467 5418469 5418470, overlap 5418469 AACCATAAGCACCAA TACGTGACATCC TTCC GGATGTCACAAA TTTTATAGCAACAAT TERM 5502 5418494 - 5418467 - T 75 -9.2 -3.31589 | opp_overlap 5418467 5418469, overlap 5418469 5418470 AACCATAAGCACCAA TACGTGACATCC TTCC GGATGTCACAAA TTTTATAGCAACAAT TERM 5503 5418469 - 5418492 + T 71 -9.6 -2.52946 | opp_overlap 5418467 5418469 5418470, overlap 5418467 CCATAAGCACCAATA CGTGACATCC TTCC GGATGTCACA AATTTTATAGCAACA TERM 5504 5418492 - 5418469 - T 83 -11.8 -3.21684 | opp_overlap 5418469 5418467, overlap 5418467 5418470 CCATAAGCACCAATA CGTGACATCC TTCC GGATGTCACA AATTTTATAGCAACA TERM 5505 5418491 - 5418470 - T 91 -13.1 -2.52529 | opp_overlap 5418469 5418467, overlap 5418469 5418467 CATAAGCACCAATAC GTGACATCC TTCC GGATGTCAC AAATTTTATAGCAAC TERM 5506 5418551 - 5418582 + T 79 -2.2 -5.59357 | CCTTTTAAATTGCTC CCGTCCGGCT CGTTCCCCCTTT TGTCGGACGG TTTTTTTACTCTACT Swoo_4481 5418797 - 5418588 - | XRE family transcriptional regulator Swoo_4482 5419321 - 5418806 - | hypothetical protein TERM 5507 5419393 - 5419415 + H 70 -5 -4.57353 | opp_overlap 5419396, overlap 5419385 TCGTAACTTAATATT TAATTATCGT TTT ACAATAATTA TTTTATGTAATAGGC TERM 5508 5421294 - 5421276 - g 85 -11.8 -3.29461 | opp_overlap 5421276, overlap 5421283 TAACTTCGTCGATAA CATCAAGG CGC CCTTGATG TTAGTTCAAGGCGCT TERM 5509 5421276 - 5421294 + G 85 -11.8 -3.33815 | opp_overlap 5421276 5421283 TAACTTCGTCGATAA CATCAAGG CGC CCTTGATG TTAGTTCAAGGCGCT Swoo_4483 5419513 - 5421561 + | peptidase S9 prolyl oligopeptidase TERM 5510 5421591 - 5421614 + T 88 -9.6 -4.58773 | AATATCACTTCCTCA GGCCTAGG TTTTAATT CCTAGGCC TTTTCCTTTAATCCA Swoo_4484 5423172 - 5421622 - | amino acid/peptide transporter TERM 5511 5422046 - 5422056 + g 71 -4.6 -4.68593 | TTCATCGGCGTACTT GGGG CTA CTCC TTTTTGAATCATCCA TERM 5512 5424782 - 5424756 - g 78 -11.6 -2.88544 | opp_overlap 5424752, overlap 5424758 CCCTAGGCTCAGACA GACCCAGCGACA GCA TGTCACTGGCTC GCCTTTACGCCAAGA Swoo_4485 5423402 - 5424964 + | transcriptional regulator, CadC Swoo_4486 5426639 - 5425095 - | Na+/H+ antiporter NhaC TERM 5513 5426062 - 5426042 - G 72 -10.5 -2.94416 | TAGTTGTATCAGACA TTGGCGACA TCT TATCGCCAA AGTAAGCGCCACTGA TERM 5514 5426894 - 5426921 + r 100 -18.6 -3.46271 | opp_overlap 5426894, overlap 5426887 5426885 ATCACCCATAAAAAA CGGCCTTTTGAG CTAA CTCAAAAGGCCG TTATAACTATTTATA TERM 5515 5426921 - 5426894 - R 100 -18.6 -5.28778 | opp_overlap 5426894 5426887 5426885 ATCACCCATAAAAAA CGGCCTTTTGAG CTAA CTCAAAAGGCCG TTATAACTATTTATA Swoo_4487 5427401 - 5426943 - | hypothetical protein Swoo_4488 5429192 - 5427414 - | proprotein convertase P TERM 5516 5428503 - 5428491 - G 74 -4.1 -5.00616 | GCCGCCTGCAAAAAA GTCAC CAG GTAAC ACAAAGAAACCACCA TERM 5517 5428533 - 5428513 - G 71 -4.7 -4.68511 | overlap 5428514 5428527 GGTAACACAAAGAAA CCACCACTT CTA AAGTAGCGA TAGCCGTTACCCGCC TERM 5518 5429353 - 5429341 - H 80 -2.7 -5.5112 | TCGAGTAACAAAAAA TTTAC ATA GCAAA AATAGTGGTACTCTG TERM 5519 5429734 - 5429714 - H 80 -9.8 -3.70446 | opp_overlap 5429733, overlap 5429709 GGACAGTTAAGAGAA TCTCTCAC TCTAT GTGAGAGA CCGAAATCCGTCCTT Swoo_4489 5429815 - 5430393 + | hypothetical protein TERM 5520 5430420 - 5430449 + T 82 -10.9 -3.26471 | opp_overlap 5430426, overlap 5430426 TCAAGCTTCAAAAAC AAAAAAGCACTTC GATT GAAGTGCTTTTTA TTAGTCTAAAGATAG TERM 5521 5430443 - 5430426 - T 100 -9.9 -5.93252 | opp_overlap 5430420 5430426 TTCAAAAACAAAAAA GCACTTC GATT GAAGTGC TTTTTATTAGTCTAA TERM 5522 5430426 - 5430443 + T 93 -9.9 -5.16841 | opp_overlap 5430426, overlap 5430420 TTCAAAAACAAAAAA GCACTTC GATT GAAGTGC TTTTTATTAGTCTAA Swoo_4490 5432524 - 5430479 - | peptidase S9 prolyl oligopeptidase TERM 5523 5430677 - 5430639 - G 72 -6.7 -4.21827 | overlap 5430640 CGAAATAGCTCAAAA CCTTGGCCTACTGGA ACGCGGTAA TCCAGTTGGCCATGA ACCACTAAGGTTGGA TERM 5524 5431303 - 5431313 + g 74 -5.4 -4.68506 | AGCTATCCAAACGTG TGGT TTT ACCA TTTTTAGGATTGATT TERM 5525 5431567 - 5431577 + g 71 -2.4 -5.08824 | CGGCGGTAATATTTC GCTC TGT GCGC TTTTTTACATCAAGC TERM 5526 5432753 - 5432723 - R 78 -9.8 -3.26164 | overlap 5432726 ATATGACTCACAATA TAATGCCCACCAAA CAG TATGGCAGGCATTA ACCTTTAAGATAAAA TERM 5527 5432750 - 5432726 - R 70 -7.1 -3.76568 | overlap 5432723 TGACTCACAATATAA TGCCCACCAAA CAG TATGGCAGGCA TTAACCTTTAAGATA Swoo_4491 5433862 - 5432783 - | hypothetical protein TERM 5528 5433667 - 5433685 + g 76 -10.2 -3.29973 | opp_overlap 5433663 5433662 AGACAACATATTCTG GCCACTCC ATT GGTGTGGC TTGATCCATTTTTAA TERM 5529 5434395 - 5434367 - R 91 -10.3 -4.81249 | overlap 5434369 GGCCAAATCGAAAAA TATTGGTGAAGGC AGT GCCTCCACCAACC AAAAGCTAAACCCTC TERM 5530 5434393 - 5434369 - R 100 -15.1 -4.02139 | overlap 5434367 CCAAATCGAAAAATA TTGGTGAAGGC AGT GCCTCCACCAA CCAAAAGCTAAACCC Swoo_4492 5435487 - 5434423 - | choloylglycine hydrolase TERM 5531 5435802 - 5435784 - g 71 -8.2 -3.81146 | TCTCGCAATGAAGAA TCGCCATA CTC TATGGCAA ACTCACCTCTATTCA TERM 5532 5435951 - 5435977 + G 71 -8.8 -3.50393 | opp_overlap 5435940 5435957, overlap 5435954 GAAAGTTAATCACCT TAACCATGATGC TCA GTATCATGGTGA TTATCTACCCTAAGC TERM 5533 5435954 - 5435974 + G 72 -10.5 -2.89298 | opp_overlap 5435957, overlap 5435951 AGTTAATCACCTTAA CCATGATGC TCA GTATCATGG TGATTATCTACCCTA Swoo_4493 5435641 - 5436639 + | diguanylate cyclase TERM 5534 5436810 - 5436838 + T 79 -9.6 -3.71751 | overlap 5436812 5436814 CTTAAATATCCACTC TGGCGCCTCAAG ATCAC CTTGAGGCTCTA TTCTCTATCTTCTCT TERM 5535 5436812 - 5436836 + T 79 -10 -3.42685 | overlap 5436810 5436814 TAAATATCCACTCTG GCGCCTCAAG ATCAC CTTGAGGCTC TATTCTCTATCTTCT TERM 5536 5436814 - 5436834 + T 82 -11.2 -3.26989 | overlap 5436812 5436810 AATATCCACTCTGGC GCCTCAAG ATCAC CTTGAGGC TCTATTCTCTATCTT TERM 5537 5436884 - 5436868 - T 79 -7.3 -4.62069 | TTCGCACCGCAAAAA CCATGCT AAT AACATGG GCAATAACTAAGCTT Swoo_4494 5437673 - 5436975 - | hypothetical protein TERM 5538 5437367 - 5437353 - G 72 -8.6 -3.60234 | CCAGATATTTTCAAA GTGCTT TTC AAGCAC CATATAATTATCCAG Swoo_4495 5438656 - 5437772 - | putative esterase Swoo_4496 5439762 - 5438659 - | hypothetical protein TERM 5539 5439174 - 5439158 - G 76 -6.5 -4.54297 | TCAATAACAAAATAA GCTAGCG ATG CGGTAGC CAGAGTCCCTAAAAT TERM 5540 5439896 - 5439869 - R 100 -14.3 -3.42378 | opp_overlap 5439872 5439874, overlap 5439863 GGAAGAAGAGAGGAA GGACATTGAGC AAACTA GCTCAATGTCC TTAAACAGGGCTAAA Swoo_4497 5440774 - 5439914 - | 4-hydroxybenzoate polyprenyl transferase Swoo_4498 5443033 - 5440868 - | DNA helicase II TERM 5541 5440939 - 5440928 - G 71 -4.4 -4.70659 | GCCCACATCGAAAAA GTTC ACCT GAAC TCTAGCTTGCGGACC Swoo_4499 5445531 - 5443396 - | transcriptional regulator, CadC TERM 5542 5443452 - 5443462 + g 74 -5.4 -4.62783 | TGCGCATGGTCATTA GCAA GGT TTGC TTTTTAAGGTCAGTA TERM 5543 5445444 - 5445466 + g 72 -7 -4.1899 | CAGCGAGCGCCTTGG GCGGCAAAGT TTG GCTTTGTTGC TTTTGGGTGAGCTGA Swoo_4500 5445758 - 5447023 + | beta-lactamase TERM 5544 5447041 - 5447078 + T 74 -8.6 -3.69434 | opp_overlap 5447028 5447043, overlap 5447032 5447043 CAGCCACTCTCAAAC TAGGTTTGAGACTTGC CTGATA GCAAGTTTCAAATCTC TTTAGGATTGGTTCA TERM 5545 5447043 - 5447076 + T 83 -11.2 -3.42338 | opp_overlap 5447028 5447043, overlap 5447032 5447041 GCCACTCTCAAACTA GGTTTGAGACTTGC CTGATA GCAAGTTTCAAATC TCTTTAGGATTGGTT Swoo_4501 5448366 - 5447776 - | hypothetical protein TERM 5546 5447986 - 5448001 + g 77 -7.6 -4.4078 | TAGTAACTCGATATG TTCAGC GACA GCTGAA TTTTCGTTAACCACA Swoo_4502 5448895 - 5448485 - | hypothetical protein TERM 5547 5449504 - 5449492 - R 74 -9.1 -3.49653 | opp_overlap 5449491 5449490 ATTACTTGCACATAA GCCTG CGG CAGGC AATTGATGATAATGA TERM 5548 5449533 - 5449517 - R 77 -9.5 -3.44319 | GGCAATTGATGATAA TGAAGGT ACA ACCTTCA AACACAACACCAAAT TERM 5549 5449955 - 5449924 - R 79 -7.4 -4.68124 | overlap 5449926 5449929 TTAACAGATAGAAAA TGTAATCAGCCTTC ATTC GAAGGCTAACTAAA ATCGTTGTTTATGCA TERM 5550 5449953 - 5449926 - R 74 -10 -2.62789 | overlap 5449924 5449929 AACAGATAGAAAATG TAATCAGCCTTC ATTC GAAGGCTAACTA AAATCGTTGTTTATG TERM 5551 5449950 - 5449929 - R 77 -9.5 -3.44377 | overlap 5449926 5449924 AGATAGAAAATGTAA TCAGCCTTC ATTC GAAGGCTAA CTAAAATCGTTGTTT Swoo_4503 5450320 - 5449964 - | endoribonuclease L-PSP Swoo_4504 5450866 - 5450462 - | NUDIX hydrolase TERM 5552 5450834 - 5450824 - G 76 -5.4 -4.77036 | TGTCACGATCAAAAA TCAC AGC GTGA CTACTGAGACGAAAT TERM 5553 5451015 - 5451041 + r 87 -12.3 -3.11732 | opp_overlap 5451015, overlap 5451020 5451036 GGAAGAGTAGAGAAA GGTAAGCGGAG TTATT CGCCGCTTACC TTAAGTACATTTAGC TERM 5554 5451041 - 5451015 - R 95 -12.3 -4.13591 | opp_overlap 5451015 5451020 5451036 GGAAGAGTAGAGAAA GGTAAGCGGAG TTATT CGCCGCTTACC TTAAGTACATTTAGC Swoo_4505 5451989 - 5451057 - | band 7 protein Swoo_4506 5452918 - 5451986 - | band 7 protein TERM 5555 5452943 - 5452957 + r 79 -7.1 -4.68384 | CCTTATTTGTTTGTT GCACC CAGCA GGTGC TTTTATTAGATGAGT Swoo_4507 5453434 - 5452973 - | hypothetical protein TERM 5556 5453620 - 5453600 - H 73 -8.5 -3.67646 | AATAAACAAGCAGAA TTATTAACT TTG AGTTAATAA AAACAAAGAGATAGA TERM 5557 5454267 - 5454281 + G 72 -7.1 -4.14511 | CATCAGCGACGGTTG GCAGG TAACC CCTGC TTTTAGAATGGACTT Swoo_4508 5453794 - 5454546 + | hypothetical protein TERM 5558 5454564 - 5454592 + T 78 -10.4 -3.08996 | opp_overlap 5454571, overlap 5454571 CATTAAAAAGTGCTA CAAAAAAGGCGC CTAGA GCGCCTTTTTTA TCTTCAATCAACCTA TERM 5559 5454585 - 5454571 - T 100 -9.2 -5.25803 | opp_overlap 5454571 5454564 AAGTGCTACAAAAAA GGCGCC TAG AGCGCC TTTTTTATCTTCAAT TERM 5560 5454571 - 5454585 + T 100 -8.5 -5.48063 | opp_overlap 5454571, overlap 5454564 AAGTGCTACAAAAAA GGCGC CTAGA GCGCC TTTTTTATCTTCAAT Swoo_4509 5455390 - 5454632 - | uridine phosphorylase TERM 5561 5455283 - 5455271 - G 71 -9.1 -3.39895 | opp_overlap 5455267 5455270 GTGGCTAGCAAGGAA GGAGG CTC CCTCC ATTAGCTCGGCAATT Swoo_4510 5455728 - 5455949 + | hypothetical protein TERM 5562 5455994 - 5455962 - T 100 -14.3 -3.62522 | opp_overlap 5455964 5455970, overlap 5455970 TAACCGTTTTAACAA TATAAAAACGGGTGC CAT GCGCCCGTTTCTATA TTCCAGCTCTAAGCA TERM 5563 5455964 - 5455992 + T 91 -12.5 -3.05343 | opp_overlap 5455962 5455970, overlap 5455970 ACCGTTTTAACAATA TAAAAACGGGTGC CAT GCGCCCGTTTCTA TATTCCAGCTCTAAG TERM 5564 5455970 - 5455986 + T 93 -11.5 -4.2074 | opp_overlap 5455970 5455962, overlap 5455964 TTAACAATATAAAAA CGGGTGC CAT GCGCCCG TTTCTATATTCCAGC TERM 5565 5455986 - 5455970 - T 100 -9.3 -5.2015 | opp_overlap 5455964 5455970, overlap 5455962 TTAACAATATAAAAA CGGGTGC CAT GCGCCCG TTTCTATATTCCAGC Swoo_4511 5456480 - 5456016 - | hypothetical protein Swoo_4512 5456687 - 5457520 + | MscS mechanosensitive ion channel Swoo_4513 5457956 - 5458981 + | OmpA domain-containing protein TERM 5566 5459280 - 5459293 + F 70 -5.2 -4.62336 | opp_overlap 5459280 GTTTGTGATCCCAAA GGCC ATGGAA GGCC TTTTTCACATCACAT TERM 5567 5459691 - 5459663 - g 81 -11.6 -3.17797 | GGGAGATAGATTTAA CCCGGCAACGGC TCAAG GCCGTATCCGGG TCATGATGAATGACG Swoo_4514 5459373 - 5460326 + | LysR family transcriptional regulator Swoo_4515 5460358 - 5461302 + | LysR family transcriptional regulator Swoo_4516 5462440 - 5461559 - | radical SAM domain-containing protein TERM 5568 5462841 - 5462819 - H 76 -4.9 -5.03145 | TAATCCGGCAAAAAA TTCACCC TTGCTAGCT GGGTGAA TCAAATAATAGCAAG TERM 5569 5462904 - 5462934 + H 86 -9.7 -4.27886 | opp_overlap 5462908, overlap 5462908 CAGATGTCCATGTCA TAGAGGGGCACCG CAGAT TGGTGCCCCTTCA TTTGTGTCTTTCAAA TERM 5570 5462908 - 5462930 + H 95 -12.7 -3.69992 | opp_overlap 5462908, overlap 5462904 TGTCCATGTCATAGA GGGGCACCG CAGAT TGGTGCCCC TTCATTTGTGTCTTT TERM 5571 5462930 - 5462908 - H 87 -12 -2.89564 | opp_overlap 5462904 5462908 TGTCCATGTCATAGA GGGGCACC GCAGATT GGTGCCCC TTCATTTGTGTCTTT TERM 5572 5463552 - 5463527 - g 71 -3.9 -4.82901 | GTTGGCTTACAAAAA GCCAATGCTGA ACTG TCTGCAATGAC TGAAAATGGTATTGC TERM 5573 5464730 - 5464717 - g 82 -6.7 -4.94902 | opp_overlap 5464723, overlap 5464705 5464702 TAACTACCACAAAAA CGGTA GCTA TACCG AAGGTGGTCTAGATT TERM 5574 5465129 - 5465180 + G 71 -4.5 -4.62872 | gap 1 CCAACTTCAGAGTCT TGTGCAACTTGTC-ACGCCGAAGG CAAAT CTTACGGCATCGAGAAGTTCCACA TTTTTGAGCGTTCAT Swoo_4517 5463272 - 5465200 + | hypothetical protein TERM 5575 5465928 - 5465945 + G 74 -4.1 -4.9725 | overlap 5465930 GCCAACTTTGTTAAC TTCACCA ATGA TGGTGCA TTTTTCTATGCAACT Swoo_4518 5465472 - 5467430 + | peptidase S9 prolyl oligopeptidase TERM 5576 5467472 - 5467444 - T 100 -12.6 -5.66229 | opp_overlap 5467471 AGTAACAACAAAAAA GCCCAATCAAAT CTAAC ACTTGATTGGGC TTAGAACATCTAGCT Swoo_4519 5468244 - 5467516 - | hypothetical protein Swoo_4520 5469286 - 5468357 - | LysR family transcriptional regulator Swoo_4521 5469384 - 5470439 + | secretion protein HlyD family protein TERM 5577 5470887 - 5470904 + G 85 -7.7 -4.62783 | TCCCCGAGAGTAAGC GCGCTAT AGGC ATGGCGC TTTTTGGGGTAACTG TERM 5578 5471933 - 5471944 + G 89 -3 -5.62045 | GCCTATATCCAAGCT TACA ATGA TGTA TTTTTTATTATCTCT Swoo_4522 5470442 - 5472022 + | EmrB/QacA family drug resistance transporter Swoo_4523 5472100 - 5472555 + | GCN5-related N-acetyltransferase TERM 5579 5472993 - 5472959 - T 100 -15.2 -2.76261 | opp_overlap 5472967, overlap 5472967 CGTTAATCCCTAAAC GCAAAAAAGCCACCTT AAT AAGGTGGCTTCTCTAC TACTCTTTACGAGTA TERM 5580 5472985 - 5472967 - T 100 -13.2 -5.22039 | opp_overlap 5472967, overlap 5472959 CCTAAACGCAAAAAA GCCACCTT AAT AAGGTGGC TTCTCTACTACTCTT TERM 5581 5472967 - 5472985 + T 100 -13.2 -3.57389 | opp_overlap 5472967 5472959 CCTAAACGCAAAAAA GCCACCTT AAT AAGGTGGC TTCTCTACTACTCTT TERM 5582 5474354 - 5474365 + T 71 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5583 5474860 - 5474876 + T 75 -8 -4.08546 | overlap 5474849 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5584 5475658 - 5475670 + T 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5585 5476522 - 5476541 + T 71 -9.2 -2.65808 | opp_overlap 5476510 5476513, overlap 5476519 TAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 5586 5477573 - 5477595 + T 72 -9.2 -2.87527 | opp_overlap 5477566 5477578, overlap 5477572 GCGAGTAACGTCACA GCTAACGGTT ATT AACCGTTAAC CTTTCCTCCTCGCTG TERM 5587 5478626 - 5478639 + T 73 -2.5 -5.28778 | AAGGGCTTTTTTCAG TAAAT ATTG ATTTA TTTTTTATACCTAAT TERM 5588 5479932 - 5479950 + T 74 -8.8 -3.56987 | opp_overlap 5479932 CCTAAACGCAAAAAA GCCACCCT ATT AAGGTGGC TTATCTACTACTCTA TERM 5589 5479950 - 5479932 - T 100 -11 -5.22039 | opp_overlap 5479932 CCTAAACGCAAAAAA GCCACCCT ATT AAGGTGGC TTATCTACTACTCTA TERM 5590 5481608 - 5481619 + T 71 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5591 5482114 - 5482130 + T 75 -8 -4.08546 | overlap 5482103 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5592 5482912 - 5482924 + T 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5593 5483631 - 5483663 + T 73 -9.3 -3.0094 | opp_overlap 5483632, overlap 5483638 GAGCGGGCTTAAAAA AGCCAAAGATAAAGT GTT AGTTTATCTTTGGCA TCTCTATCCATGAGC TERM 5594 5483662 - 5483632 - T 100 -12.8 -5.00884 | opp_overlap 5483631 5483638 AGCGGGCTTAAAAAA GCCAAAGATAAAGT GTT AGTTTATCTTTGGC ATCTCTATCCATGAG TERM 5595 5484271 - 5484290 + T 71 -9.2 -2.65808 | opp_overlap 5484259 5484262, overlap 5484268 TAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 5596 5485322 - 5485344 + T 72 -9.2 -2.87527 | opp_overlap 5485315 5485327, overlap 5485321 GCGAGTAACGTCACA GCTAACGGTT ATT AACCGTTAAC CTTTCCTCCTCGCTG TERM 5597 5486463 - 5486493 + T 87 -12 -3.1082 | opp_overlap 5486468, overlap 5486468 AAGAGACTAAGATCA AAAAAGCCACCTAG TAA TTAGGTGGCTTTTA TCTGTTCACTACATG TERM 5598 5486468 - 5486488 + T 100 -11.9 -4.68545 | opp_overlap 5486468, overlap 5486463 ACTAAGATCAAAAAA GCCACCTAG TAA TTAGGTGGC TTTTATCTGTTCACT TERM 5599 5486488 - 5486468 - T 100 -11.2 -5.28683 | opp_overlap 5486468 5486463 ACTAAGATCAAAAAA GCCACCTA GTAAT TAGGTGGC TTTTATCTGTTCACT TERM 5600 5486532 - 5486507 - T 76 -10.6 -2.78596 | opp_overlap 5486500 5486513, overlap 5486513 TATCTGTTCACTACA TGGAAAGCTA TTAAGT TAGCTTTCCA TGACACTGCTTATAT Swoo_4525 5489240 - 5486517 - | preprotein translocase, SecA subunit Swoo_4526 5490199 - 5489300 - | peptidase M23B TERM 5601 5490669 - 5490635 - g 100 -15.1 -3.72576 | opp_overlap 5490631, overlap 5490641 TCTCTTGCGATTAAA CTAAAACGGCTGGCT GCATT AGCCAGCCGTTCAAG GCAATCTTAGAATAG TERM 5602 5490663 - 5490641 - g 100 -14.9 -4.58773 | opp_overlap 5490631, overlap 5490635 GCGATTAAACTAAAA CGGCTGGCT GCATT AGCCAGCCG TTCAAGGCAATCTTA Swoo_4527 5490227 - 5490679 + | hypothetical protein Swoo_4528 5491704 - 5490787 - | UDP-3-0-acyl N-acetylglucosamine deacetylase TERM 5603 5491748 - 5491734 - R 81 -6.4 -4.89477 | CTCTCAACAATAAAA GCTCAA ATC CTGAGC AGCAAAAAGTGCACA Swoo_4529 5493058 - 5491880 - | cell division protein FtsZ Swoo_4530 5494371 - 5493136 - | cell division protein FtsA Swoo_4531 5495031 - 5494375 - | polypeptide-transport-associated domain-containing protein TERM 5604 5494932 - 5494943 + g 70 -5.8 -4.42788 | GGGCAGCCTGTATCT CCTC ATCT GAGG TTTTATCACGTTCCC Swoo_4532 5496740 - 5495271 - | UDP-N-acetylmuramate--alanine ligase TERM 5605 5495962 - 5495950 - G 78 -6.3 -4.64676 | CCATCCTGAACAAAA TTCAG CGC CTGAA CATCAGCATCTTCAC Swoo_4533 5497839 - 5496742 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Swoo_4534 5499053 - 5497839 - | cell division protein FtsW Swoo_4535 5500374 - 5499046 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 5606 5500390 - 5500411 + r 70 -8.7 -3.16117 | overlap 5500388 GCTCAGCTACCTTAA CCCTAAGCC GCTA GGCTTAAGG TCTTGAGTTAGGTGT Swoo_4536 5501530 - 5500448 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 5607 5501545 - 5501558 + r 77 -6.7 -4.58395 | TTAAACAAACTCCCC TTGCC CATG GGCAA TTTTTAAGGCCTCAA Swoo_4537 5502897 - 5501530 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 5608 5502714 - 5502683 - G 79 -9.4 -3.76373 | overlap 5502666 TGGGGAATATCCAAA GCAAGTTCACGGCT CACC AGCAGCGCACTTGC ACCATTTTCTAGCGC Swoo_4538 5504402 - 5502894 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 5609 5503844 - 5503865 + g 72 -9.5 -3.17075 | overlap 5503838 CATCGACTCTTGCCT GTATCAGGC CATG GCTTGATAC TTCCATTGCACACAG Swoo_4539 5506138 - 5504402 - | peptidoglycan glycosyltransferase TERM 5610 5504515 - 5504505 - G 70 -6.8 -4.08945 | ATCACCTTGGCAAAA GCTG GTG CAGC AAGATCGCCACCATA Swoo_4540 5506523 - 5506209 - | cell division protein FtsL Swoo_4541 5507539 - 5506598 - | S-adenosyl-methyltransferase MraW Swoo_4542 5508033 - 5507575 - | MraZ protein Swoo_4543 5508643 - 5508930 + | hypothetical protein Swoo_4544 5510419 - 5508932 - | glycerol kinase TERM 5611 5509448 - 5509431 - G 70 -6.3 -4.18197 | opp_overlap 5509431, overlap 5509433 ACTCTTGAGGCAAAA TACTCAG TATC CTGAGCA TCTCTGATTAATCCA Swoo_4545 5510936 - 5510448 - | hypothetical protein TERM 5612 5511091 - 5511068 - R 100 -11 -5.47218 | opp_overlap 5511068 TTTGACTTAAAAAAA GGGCTGGCAC CTAA GTACCAACCC TTTATCAATAAAGTC Swoo_4546 5512409 - 5511111 - | membrane protein involved in aromatic hydrocarbon degradation TERM 5613 5512846 - 5512877 + r 84 -5.8 -5.24531 | opp_overlap 5512849, overlap 5512847 5512849 TTCGTCATTAAAACA AAAGCCAGACAAGC TTAA GCTTATCTGGCTCA TTTTTTATAACACGT TERM 5614 5512847 - 5512876 + r 79 -9.3 -3.73995 | opp_overlap 5512849, overlap 5512846 5512849 TCGTCATTAAAACAA AAGCCAGACAAGC TTAA GCTTATCTGGCTC ATTTTTTATAACACG TERM 5615 5512874 - 5512849 - R 100 -14.1 -5.13722 | opp_overlap 5512847 5512846 5512849 GTCATTAAAACAAAA GCCAGACAAGC TTAA GCTTATCTGGC TCATTTTTTATAACA TERM 5616 5512849 - 5512874 + r 90 -11.9 -3.44801 | opp_overlap 5512849, overlap 5512847 5512846 GTCATTAAAACAAAA GCCAGACAAGC TTAA GCTTATCTGGC TCATTTTTTATAACA Swoo_4547 5513534 - 5512929 - | 3-isopropylmalate dehydratase, small subunit Swoo_4548 5514944 - 5513544 - | 3-isopropylmalate dehydratase, large subunit TERM 5617 5514850 - 5514825 - G 93 -11.9 -3.794 | opp_overlap 5514819 5514818 CTTTAACCCACTAAA TGCCTGAGGTG ATGT CACCTCATGCA CTAGATGTCTGTCTA Swoo_4549 5516042 - 5514948 - | 3-isopropylmalate dehydrogenase Swoo_4550 5517674 - 5516103 - | 2-isopropylmalate synthase TERM 5618 5517745 - 5517766 + H 93 -11.5 -4.29325 | opp_overlap 5517745 TACAAAAACAAAAAA CCCCGCGAT TCGT AGCGCGGGG TTTTGAATGTTGGTG TERM 5619 5517766 - 5517745 - H 100 -11.5 -5.98675 | opp_overlap 5517745 TACAAAAACAAAAAA CCCCGCGAT TCGT AGCGCGGGG TTTTGAATGTTGGTG Swoo_4551 5518205 - 5519956 + | response regulator receiver protein Swoo_4552 5521803 - 5519977 - | ATP-dependent DNA helicase RecQ TERM 5620 5520933 - 5520923 - G 74 -6.8 -4.3467 | overlap 5520925 5520927 ATCCCCATACCAAAA GCGA CGG TCGC CACCACAATATCGAG TERM 5621 5522269 - 5522286 + G 70 -6.9 -4.10161 | ACAGTGTTGGATGTT GTCGGTG GGCT CACCGCC TTTTCAGGCCTAGTC Swoo_4553 5522062 - 5522526 + | thioesterase superfamily protein Swoo_4554 5522651 - 5523541 + | transporter DMT superfamily protein TERM 5622 5523556 - 5523578 + T 91 -12.8 -3.08679 | opp_overlap 5523560, overlap 5523560 AAATTATGATAAAAA TAAAGCCCCA TAA TGGGGCTTTG TCTTAAATACAGCAC TERM 5623 5523574 - 5523560 - T 100 -11.4 -4.98911 | opp_overlap 5523556 5523560 TATGATAAAAATAAA GCCCCA TAA TGGGGC TTTGTCTTAAATACA TERM 5624 5523560 - 5523574 + T 93 -11.4 -4.21607 | opp_overlap 5523560, overlap 5523556 TATGATAAAAATAAA GCCCCA TAA TGGGGC TTTGTCTTAAATACA Swoo_4555 5526010 - 5523599 - | TonB-dependent receptor TERM 5625 5525107 - 5525127 + g 71 -3.9 -4.77036 | overlap 5525110 ACTCCCCCCCTTCAA CCTCACCTA AAC TAGGTGTTG TTTTTGCTGATGCCA TERM 5626 5525110 - 5525124 + g 87 -8.6 -4.49314 | overlap 5525107 CCCCCCCTTCAACCT CACCTA AAC TAGGTG TTGTTTTTGCTGATG TERM 5627 5526108 - 5526087 - R 80 -10.2 -3.6692 | overlap 5526085 CCCCATCTGAAAATA GGCTCACT CTCCCC AGTGAGCC ATACCCGTTAAATAC Swoo_4556 5527489 - 5526116 - | hypothetical protein Swoo_4557 5527577 - 5528296 + | Crp/FNR family transcriptional regulator Swoo_4558 5529650 - 5528331 - | amino-acid N-acetyltransferase TERM 5628 5528839 - 5528822 - G 70 -5.6 -4.3739 | CATCTCTGGAGAAAA GCTCTT GCAGCA AAGAGC CATCATCTAAATAGC TERM 5629 5530154 - 5530170 + r 100 -12.3 -4.57073 | opp_overlap 5530154 TTCAGGCAAAAAAAA GCCCCTT TAT AAGGGGC TTTTTAAGAAAACTA TERM 5630 5530170 - 5530154 - R 100 -12.3 -5.81412 | opp_overlap 5530154 TTCAGGCAAAAAAAA GCCCCTT TAT AAGGGGC TTTTTAAGAAAACTA TERM 5631 5530190 - 5530205 + r 72 -6.2 -4.40311 | TAAGAAAACTAGCTA TCAAGT AATT ACTTGA TTTTAGCTTCTTTGT Swoo_4559 5530371 - 5530198 - | ribosomal protein L33 Swoo_4560 5530614 - 5530378 - | ribosomal protein L28 TERM 5632 5530544 - 5530532 - G 79 -4.8 -5.09225 | opp_overlap 5530532 5530535, overlap 5530535 AGGTTAGGTAAAAAA CGAC GACGT GTCG CGTTTTTCGCGTGTG Swoo_4561 5531419 - 5530742 - | DNA repair protein RadC TERM 5633 5530897 - 5530925 + g 100 -3.7 -5.67967 | CAACTCCTGATGGAT GGTTGTGGCAG ACAATCA CAGCCGCGGCC TTTTTTTCTAGTACT Swoo_4562 5531639 - 5532865 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 5634 5532998 - 5533010 + G 77 -9.1 -3.73224 | GCCTTAGTGTTGCGC CGGGT GAA ACCCG TTTAATCCCAACTGG Swoo_4563 5532865 - 5533323 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut TERM 5635 5533955 - 5533974 + G 70 -6.4 -4.2704 | overlap 5533953 TACTGCTGGCAGTCG CTGAGGGG CGTA TCTCTCAG TTTGTTCGTAGTGAG Swoo_4564 5533468 - 5534061 + | TetR family transcriptional regulator TERM 5636 5534329 - 5534346 + G 79 -9.9 -3.76492 | opp_overlap 5534325 ACTCCCGAACAGCTA TTCAGCC GAGG GGCTGAA TTTACTGACGTTAAG TERM 5637 5534683 - 5534670 - g 79 -3.7 -5.24647 | overlap 5534673 ACATATAAAACAAAA CACGC CGAT GCGAG CCACAGCTTACATCC Swoo_4565 5534233 - 5536206 + | peptidase S9 prolyl oligopeptidase TERM 5638 5536246 - 5536228 - f 100 -14.6 -4.22948 | opp_overlap 5536228 AAAACGTACTGAAAA GCCGATGG CCA CCATCGGC TTTTTTTCTTATCTA TERM 5639 5536228 - 5536246 + F 100 -14.6 -5.9218 | opp_overlap 5536228 AAAACGTACTGAAAA GCCGATGG CCA CCATCGGC TTTTTTTCTTATCTA Swoo_4566 5536447 - 5537106 + | GTP cyclohydrolase I TERM 5640 5537258 - 5537289 + T 72 -5.9 -4.46775 | opp_overlap 5537258 AAAAGTCATAAAAAA TGCCGCGATTATA TTTAAC TATAACAGCGGCA TTTATCTTTTCAGTA TERM 5641 5537289 - 5537258 - T 100 -8.1 -5.35222 | opp_overlap 5537258 AAAAGTCATAAAAAA TGCCGCGATTATA TTTAAC TATAACAGCGGCA TTTATCTTTTCAGTA Swoo_4567 5537996 - 5537355 - | orotate phosphoribosyltransferase TERM 5642 5538065 - 5538050 - R 90 -8.2 -4.87665 | TTTCACTTACAAAAA GGACCC CGTA GGGCCC TAATAACAAAAACAA Swoo_4568 5538797 - 5538084 - | ribonuclease PH Swoo_4569 5539010 - 5539873 + | YicC domain-containing protein TERM 5643 5539946 - 5539929 - f 91 -12.7 -3.05807 | opp_overlap 5539929 5539943 GTAAAATATTAGAGA GCCCAGC TAAT GCTGGGC TTTTTGTTTGCCCTT TERM 5644 5539929 - 5539946 + F 100 -12.7 -5.29846 | opp_overlap 5539929, overlap 5539943 GTAAAATATTAGAGA GCCCAGC TAAT GCTGGGC TTTTTGTTTGCCCTT Swoo_4570 5540226 - 5540474 + | XRE family transcriptional regulator Swoo_4571 5540461 - 5541768 + | HipA domain-containing protein TERM 5645 5542054 - 5542036 - g 73 -3 -5.03314 | opp_overlap 5542052, overlap 5542021 CGCATCCTCAAAAAA GGTGGC GCACAAG GCCGCC GACTCGACTTTATGA Swoo_4572 5541796 - 5542185 + | hypothetical protein Swoo_4573 5543612 - 5542356 - | HipA domain-containing protein TERM 5646 5543364 - 5543403 + g 72 -6.6 -4.18762 | gap 1 CACAATCTCTCTTAA GATCCCCTCTGGTAATA AATTCGA TAATAC-AGGGGGGATC TTTTCACTGCGGATT Swoo_4574 5543920 - 5543609 - | XRE family transcriptional regulator Swoo_4575 5545068 - 5544346 - | amino acid adenylation TERM 5647 5546241 - 5546225 - g 73 -10.1 -3.1247 | overlap 5546229 ATCCGTGATACTGAA GCGACTG CGG CAGCCGC AAACTTAACCGAGCT TERM 5648 5547037 - 5547053 + G 76 -10.9 -3.04461 | opp_overlap 5547048 TGATGAAACCGTTAT GGAGCAA AGA TTGCTCC TATTAGCACTGCCTG TERM 5649 5547960 - 5547980 + G 73 -9.1 -3.48738 | overlap 5547959 GTTTCGACTCAGACG GCAATGTTG AGA CAATATTGC TCTTTAATAGTGATG Swoo_4576 5545388 - 5548258 + | hypothetical protein TERM 5650 5548280 - 5548298 + F 100 -12.4 -5.49569 | CTGAAAAGCTTACTA GCCCGTAC TCA GTGCGGGC TTTTTTATGTTACTG Swoo_4577 5548342 - 5549034 + | hypothetical protein Swoo_4578 5550113 - 5549046 - | aminoglycoside phosphotransferase Swoo_4579 5551065 - 5550106 - | hypothetical protein Swoo_4580 5552192 - 5551152 - | hypothetical protein TERM 5651 5552585 - 5552564 - H 70 -8.1 -3.3676 | gap 1, opp_overlap 5552563, overlap 5552568 TTCAATATTTCATAA CGTAGAAGCA TGT TGCTTCT-CG CCTTTCCCTTCGGGA Swoo_4581 5552785 - 5553408 + | guanylate kinase Swoo_4582 5553465 - 5553749 + | DNA-directed RNA polymerase, omega subunit TERM 5652 5553931 - 5553965 + G 70 -10.1 -2.66316 | gap 1, overlap 5553939 GTCGCCCGCATTCTG GCCGATATGCGTCTCG ATCA TGAGACGCTTAT-GGC TGCTCTCCTGCACGA TERM 5653 5553939 - 5553958 + G 76 -10 -3.38768 | overlap 5553931 CATTCTGGCCGATAT GCGTCTCG ATCA TGAGACGC TTATGGCTGCTCTCC Swoo_4583 5553763 - 5555874 + | (p)ppGpp synthetase I, SpoT/RelA Swoo_4584 5555896 - 5556279 + | endoribonuclease L-PSP TERM 5654 5556303 - 5556318 + F 100 -11.8 -5.06052 | CTCATTCATACTTTT GGGCGC TACG GCGCCC TTTTCTATTTTTTAC Swoo_4585 5556355 - 5557050 + | tRNA guanosine-2'-O-methyltransferase TERM 5655 5557418 - 5557429 + T 70 -5.8 -4.26953 | GGGCTTCTTCCGAAT CCGT TGCA ACGG TTTGTTAAGTTCCTT Swoo_4586 5558264 - 5557443 - | hypothetical protein Swoo_4587 5559207 - 5560862 + | AMP-dependent synthetase and ligase TERM 5656 5560904 - 5560888 - f 90 -12.3 -3.66178 | opp_overlap 5560888 GTCGTTAATTTTAAA GCACGCT TTA AGCGTGC TTTCTCTTTTAGCTT TERM 5657 5560888 - 5560904 + F 100 -12.3 -4.47679 | opp_overlap 5560888 GTCGTTAATTTTAAA GCACGCT TTA AGCGTGC TTTCTCTTTTAGCTT TERM 5658 5561722 - 5561744 + G 78 -10.6 -3.13177 | opp_overlap 5561715 TCGCAAAGGGGAGAG CGATATCGCC ATA GGCAATATCG TTGGCTCTAACCTGT Swoo_4588 5561042 - 5561974 + | CaCA family Na(+)/Ca(+) antiporter TERM 5659 5561993 - 5562027 + F 72 -9.6 -2.73006 | gap 1, opp_overlap 5561993 5562001, overlap 5562001 ATACCGCTCCAGTAA TACAAAAAGCCATCG ACATAC CGATGGCTTTTT-TA ATTCTGTCAGTTAAT TERM 5660 5562027 - 5561993 - f 78 -10.3 -3.14683 | gap 1, opp_overlap 5561993 5562001, overlap 5562001 ATACCGCTCCAGTAA TACAAAAAGCCATCGA CATA CCGATGGCTTTTT-TA ATTCTGTCAGTTAAT TERM 5661 5562001 - 5562020 + F 100 -9.3 -5.35354 | opp_overlap 5561993 5562001, overlap 5561993 CCAGTAATACAAAAA GCCATCG ACATAC CGATGGC TTTTTTAATTCTGTC TERM 5662 5562020 - 5562001 - f 93 -10 -5.1244 | opp_overlap 5562001 5561993, overlap 5561993 CCAGTAATACAAAAA GCCATCGA CATA CCGATGGC TTTTTTAATTCTGTC Swoo_4589 5562136 - 5562816 + | TPR repeat-containing protein TERM 5663 5562845 - 5562830 - f 85 -10.4 -4.16767 | opp_overlap 5562830 AATAATAACGATAAA CACCGC TAAG GCGGTG TTAATTGCACCCAGC TERM 5664 5562830 - 5562845 + F 79 -10.4 -3.33696 | opp_overlap 5562830 AATAATAACGATAAA CACCGC TAAG GCGGTG TTAATTGCACCCAGC TERM 5665 5563102 - 5563114 + G 70 -9.1 -3.2029 | TCATATTCCAATCTT GGCGA TGA TCGCC TTAGGTATATTGATT Swoo_4590 5562881 - 5563984 + | integral membrane sensor signal transduction histidine kinase Swoo_4591 5563981 - 5564577 + | two component LuxR family transcriptional regulator TERM 5666 5565320 - 5565294 - g 83 -10.8 -3.61536 | AATTTAAGTTTGAAA GAGGCGCTGCAA CTG CTGCATCGCCCC CACACTGGCGTGGCC TERM 5667 5565645 - 5565616 - g 73 -4.4 -4.77036 | TGGGATCAGGAAAAA CCT-TAGTGGCAGC TCTC GCCGC-ACTACAGG CGATCGAAAATGGCT Swoo_4592 5564715 - 5566790 + | ATP-dependent DNA helicase RecG Swoo_4593 5566932 - 5567801 + | hypothetical protein TERM 5668 5567893 - 5567872 - f 100 -14.5 -3.36492 | opp_overlap 5567872, overlap 5567856 GCTCCAACCCGATAA CCTGCAGCT TGTT AGCTGCAGG TTAACTAAAATGAAA TERM 5669 5567872 - 5567893 + F 95 -14.5 -3.06796 | opp_overlap 5567872 5567856 GCTCCAACCCGATAA CCTGCAGCT TGTT AGCTGCAGG TTAACTAAAATGAAA Swoo_4594 5568086 - 5568814 + | hypothetical protein Swoo_4595 5568807 - 5569619 + | phospholipid/glycerol acyltransferase TERM 5670 5569807 - 5569779 - g 74 -3.2 -5.1675 | gap 1, overlap 5569782 TTAGCGATTAAAAAA GAGTTCGATGTCA AAAT CGA-AGCGAACTC GGAAGCCACAAAAGC Swoo_4596 5569620 - 5569877 + | hypothetical protein TERM 5671 5569998 - 5570019 + G 75 -8.7 -3.78953 | opp_overlap 5570011 ACCAAGAGCTTGATC TCGACAGCA TAGA TGCGGTCGA TTTAGTGATAAAACT TERM 5672 5570076 - 5570058 - g 83 -2.5 -5.50499 | overlap 5570046 TGACAGGTAAAAAAA TTAAACC TGAAG AGTTTAA AGCCGTTCGTACAGT Swoo_4597 5569886 - 5570128 + | phosphopantetheine-binding TERM 5673 5570565 - 5570591 + G 70 -3 -4.91852 | overlap 5570568 ACGCCTTACTTGAAA AAAGTCACATTA ATC TGGTGTGGCTTA TTTGTTTTTAATGGC Swoo_4598 5570184 - 5570744 + | hypothetical protein Swoo_4599 5570741 - 5572105 + | hypothetical protein TERM 5674 5572382 - 5572394 + G 71 -7.7 -3.76141 | opp_overlap 5572382, overlap 5572380 CTCAGCAAAAACTAA GCTGA TAT TCAGC TATTTTGATGGTGAT TERM 5675 5572394 - 5572382 - g 71 -7.7 -3.84901 | opp_overlap 5572380 5572382 CTCAGCAAAAACTAA GCTGA TAT TCAGC TATTTTGATGGTGAT Swoo_4600 5572098 - 5572475 + | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ TERM 5676 5573003 - 5573020 + G 71 -8.5 -3.50532 | overlap 5572999 5573014 CTAGGTGAGCGCATG GATTTCG ATAT CGAAATC TTAGTTCGTTTACAT Swoo_4601 5572475 - 5574178 + | glycosyl transferase family protein TERM 5677 5575163 - 5575141 - g 73 -9 -3.51329 | opp_overlap 5575148, overlap 5575126 CAGTGCCAACGATAA CCCCATCGTC GAC GCCGAAGGGG AACATATCCTCCATG Swoo_4602 5574179 - 5575741 + | histidine ammonia-lyase Swoo_4603 5575738 - 5576202 + | thioesterase superfamily protein Swoo_4604 5576199 - 5577011 + | hypothetical protein Swoo_4605 5577008 - 5579407 + | Patched family protein TERM 5678 5580089 - 5580078 - g 71 -4.4 -4.62069 | CGTTCACCCTAAAAA CAGA GATA TCTG GTACTGGTTAATTCC TERM 5679 5580582 - 5580558 - g 71 -7.9 -3.79906 | opp_overlap 5580564 TGATCCCGACAATAA GATTAAGCAGA TGA TCTGCTCTATC TTGGCAGGTTACGCA Swoo_4606 5579407 - 5580669 + | tryptophan halogenase Swoo_4607 5580699 - 5580941 + | hypothetical protein Swoo_4608 5580938 - 5581537 + | hypothetical protein Swoo_4609 5581589 - 5582782 + | Beta-ketoacyl synthase Swoo_4610 5582779 - 5583282 + | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ Swoo_4611 5583287 - 5584012 + | 3-oxoacyl-(acyl-carrier-protein) reductase Swoo_4612 5584053 - 5585282 + | Beta-ketoacyl synthase Swoo_4613 5585355 - 5586713 + | hypothetical protein TERM 5680 5586727 - 5586763 + T 91 -13.3 -2.52896 | opp_overlap 5586727 5586732, overlap 5586732 AAATCCCACGAAAAA CAAAACGGAATATAGCT TTC AGTTATATTCCGTTTTA TACATTAAAAACTCA TERM 5681 5586763 - 5586727 - T 100 -13.3 -4.75404 | opp_overlap 5586727 5586732, overlap 5586732 AAATCCCACGAAAAA CAAAACGGAATATAGCT TTC AGTTATATTCCGTTTTA TACATTAAAAACTCA TERM 5682 5586732 - 5586758 + T 100 -13.2 -4.4715 | opp_overlap 5586727 5586732, overlap 5586727 CCACGAAAAACAAAA CGGAATATAGCT TTC AGTTATATTCCG TTTTATACATTAAAA TERM 5683 5586758 - 5586732 - T 100 -11 -5.3104 | opp_overlap 5586732 5586727, overlap 5586727 CCACGAAAAACAAAA CGGAATATAGCT TTC AGTTATATTCCG TTTTATACATTAAAA Swoo_4614 5587252 - 5586776 - | thioesterase domain-containing protein TERM 5684 5586980 - 5586957 - G 70 -7.4 -3.96483 | ATCGGAGCTAAATAA CGTATTTGCC CCTC GGCTAACACG ATATCTCCCTCCACT Swoo_4615 5587692 - 5587255 - | D-tyrosyl-tRNA(Tyr) deacylase Swoo_4616 5588509 - 5587949 - | hypothetical protein TERM 5685 5588426 - 5588436 + g 71 -8.2 -3.81154 | CTCAGGAGCCATACT CGCC TTA GGCG TTTCGTCACTATTTT Swoo_4617 5589478 - 5588531 - | prolyl aminopeptidase Swoo_4618 5590485 - 5589475 - | ribonuclease BN TERM 5686 5590593 - 5590630 + G 86 -2.2 -5.72622 | gap 3, opp_overlap 5590596 5590597 5590599, overlap 5590611 AAATAGATGTCACAA CAAG-GATCTGCAGGCAAT GTG ATTGCC-GCA-ATCGCTAG TTTTTTCTTTGTAGG Swoo_4619 5590584 - 5590811 + | hypothetical protein TERM 5687 5591016 - 5591005 - g 74 -5.8 -4.65895 | GGGGCTATGGAAAAA GTGG GTTA CCAC AAGCGCGATATTATG TERM 5688 5591159 - 5591146 - g 71 -3.8 -4.87665 | GGTGACTTAGAAAAA GCCT ACAACA AGGC GAAAGATGAATATGA Swoo_4620 5590918 - 5591565 + | hypothetical protein TERM 5689 5591587 - 5591603 + F 100 -12.3 -5.38054 | opp_overlap 5591587, overlap 5591580 TCAATTTATGCCAAA GGCCCTT TTA AAGGGCC TTTTTCTTTCTCGCC TERM 5690 5591603 - 5591587 - f 90 -12.3 -3.6215 | opp_overlap 5591580 5591587 TCAATTTATGCCAAA GGCCCTT TTA AAGGGCC TTTTTCTTTCTCGCC Swoo_4621 5591722 - 5593242 + | hypothetical protein TERM 5691 5593406 - 5593387 - g 74 -7.8 -4.05446 | opp_overlap 5593393 5593394, overlap 5593389 CGGCTCAAGGAGAAA CACTTGCC CCTT GGCAAGGG CCATGGGCTTGTATT TERM 5692 5593404 - 5593389 - g 75 -9 -3.6217 | opp_overlap 5593393 5593394, overlap 5593387 GCTCAAGGAGAAACA CTTGCC CCTT GGCAAG GGCCATGGGCTTGTA Swoo_4622 5593239 - 5593931 + | hypothetical protein TERM 5693 5593963 - 5593949 - g 82 -7.2 -4.63179 | opp_overlap 5593947 5593949 AAATAATAATGAAAA TACTCA CCC TGAGTA TCCTTTTGGGTTTGT Swoo_4623 5593942 - 5595918 + | peptidase domain-containing protein TERM 5694 5595932 - 5595969 + F 100 -16 -3.53012 | opp_overlap 5595938, overlap 5595935 5595938 AAGCGTTATCACCTC TAAGAAGCCATAAATA CTCAGT TATTTATGGCTTCTTA TTTAAAAACAACACA TERM 5695 5595935 - 5595966 + F 100 -13.3 -3.90744 | opp_overlap 5595938, overlap 5595932 5595938 CGTTATCACCTCTAA GAAGCCATAAATA CTCAGT TATTTATGGCTTC TTATTTAAAAACAAC TERM 5696 5595963 - 5595938 - f 78 -9.2 -3.63991 | opp_overlap 5595935 5595932 5595938 TATCACCTCTAAGAA GCCATAAATA CTCAGT TATTTATGGC TTCTTATTTAAAAAC TERM 5697 5595938 - 5595963 + F 82 -9.2 -4.08557 | opp_overlap 5595938, overlap 5595935 5595932 TATCACCTCTAAGAA GCCATAAATA CTCAGT TATTTATGGC TTCTTATTTAAAAAC Swoo_4624 5596107 - 5596847 + | hypothetical protein Swoo_4625 5596923 - 5597219 + | hypothetical protein Swoo_4626 5597221 - 5597448 + | hypothetical protein TERM 5698 5597446 - 5597477 + F 100 -12.4 -5.10968 | opp_overlap 5597444 5597454, overlap 5597451 TCATCAGCAATGAGT TGAAGCTAGCCTTC AAAT GAAGGCTAGTTACA TTTTTATATATTAAT TERM 5699 5597451 - 5597472 + F 100 -13.1 -3.50684 | opp_overlap 5597444 5597454, overlap 5597446 AGCAATGAGTTGAAG CTAGCCTTC AAAT GAAGGCTAG TTACATTTTTATATA TERM 5700 5597524 - 5597540 + F 77 -9.5 -3.49777 | ATTTGGTTACGTTGT TGAAGGT CAT ACCTTCA TTGTGATCTATCGCC Swoo_4627 5598455 - 5598832 + | hypothetical protein TERM 5701 5599099 - 5599112 + G 77 -6.7 -4.49937 | overlap 5599093 TCCAAGTTTTCGAAT GAACG TTAT CGTTC TTTTGATGTTATTCC Swoo_4628 5598829 - 5599869 + | hypothetical protein TERM 5702 5599898 - 5599931 + F 79 -9 -4.04579 | gap 1 CATTTAAGAGTGATT CCCAACGCATGGCAT TTTTC ATTCCAT-CGTTGGG TTTCGTGTTTATGGC TERM 5703 5600081 - 5600070 - g 70 -5.8 -4.37886 | GTATGTTGGATAAAA CAGG CTCA CCTG CTTACCATAGTGGCT Swoo_4629 5600021 - 5600758 + | hypothetical protein Swoo_4630 5601088 - 5601963 + | TIR protein TERM 5704 5602016 - 5601965 - f 86 -11.7 -3.77219 | gap 1, opp_overlap 5601995, overlap 5601966 5601977 5601994 ACTATGGAATGTAAA TCGCATAACAAAGCATTGCAGCGG ATAAA CCGCTG-AATGCGGCGTTATGCGT AAGGAGAATTGAAGT TERM 5705 5602015 - 5601966 - f 100 -15.2 -2.8585 | gap 1, opp_overlap 5601995, overlap 5601965 5601977 5601994 CTATGGAATGTAAAT CGCATAACAAAGCATTGCAGCGG ATAAA CCGCTG-AATGCGGCGTTATGCG TAAGGAGAATTGAAG TERM 5706 5602004 - 5601977 - f 87 -10.7 -4.33851 | gap 1, opp_overlap 5601995, overlap 5601966 5601965 5601994 AAATCGCATAACAAA GCATTGCAGCGG ATAAA CCGCTG-AATGC GGCGTTATGCGTAAG Swoo_4631 5602032 - 5603006 + | hypothetical protein TERM 5707 5603044 - 5603011 - f 73 -6.8 -4.36206 | gap 2, opp_overlap 5603032 ATAACGCATAACAAA GCATTCTAGCCGACGC CACG GCG-CTGCT-GAATGC GGCGTTATATTCACA Swoo_4632 5603166 - 5603435 + | hypothetical protein Swoo_4633 5603432 - 5603962 + | GCN5-related N-acetyltransferase TERM 5708 5604174 - 5604190 + F 73 -9.5 -3.01712 | CGATGACATGGCGAG GTATCAC GAA GTGATAC TCTTCGAACGAGAGG Swoo_4634 5604579 - 5606180 + | peptidase S41 TERM 5709 5606260 - 5606211 - g 71 -9.3 -3.37283 | overlap 5606209 5606220 5606258 CAAATCTCGTAAAGA CGCTACTAAGCCTCACCCCATTA CTCT TAATGGGGTGTAGCCTACAAGCC GACGATAGTCAGCAA TERM 5710 5606251 - 5606220 - g 93 -13.8 -3.19449 | overlap 5606211 5606209 TAAAGACGCTACTAA GCCTCACCCCATTA CTCT TAATGGGGTGTAGC CTACAAGCCGACGAT Swoo_4635 5606186 - 5606581 + | hypothetical protein TERM 5711 5606750 - 5606720 - f 70 -7.8 -3.59627 | overlap 5606724 ACTAAAGCTGCCAAA TAAACCCAACTAAT AAG ATTACTTGAGTTTA ATCAATAACATGAAA Swoo_4636 5606785 - 5607030 + | hypothetical protein Swoo_4637 5607954 - 5607091 - | pyridoxal kinase TERM 5712 5607430 - 5607446 + g 71 -8.7 -3.54129 | CAGTATCATCTCAAC GCCTGTT TTG AGCAGGC TTTCACAAGCCTGTA Swoo_4638 5608118 - 5608345 + | hypothetical protein Swoo_4639 5609394 - 5608459 - | TPR repeat-containing protein TERM 5713 5609204 - 5609230 + g 82 -7.2 -4.63044 | opp_overlap 5609214, overlap 5609210 GACAGCCCAATTTCA GCTTCATACAGC GCT GCTGTACGGCGC TTTGTTTCTATGAGT Swoo_4640 5609855 - 5609397 - | hypothetical protein TERM 5714 5609439 - 5609429 - G 81 -2.4 -5.54894 | opp_overlap 5609429 AATTCACTAAAAAAA GCTG CAA CGGC TTTCCTATCACAAAT TERM 5715 5609477 - 5609467 - G 73 -4.6 -4.78839 | overlap 5609475 AATGCCAGAACAAAA CCGA TAA CCGG ACTTGCTACATGTCC TERM 5716 5609672 - 5609659 - G 73 -4.5 -4.77079 | TAGACACCAATAAAA GCTGC AAAT GCAAC AAAGATTGTTAGTAT Swoo_4641 5611198 - 5609858 - | ATPase central domain-containing protein TERM 5717 5609904 - 5609883 - G 71 -2.2 -5.08824 | overlap 5609885 TGTTTACGCAAAAAA GCCAGCAC TTCATT GTACTGTC CAGAATCATTAGCAT TERM 5718 5610522 - 5610505 - G 78 -8.5 -4.08948 | GAATGTCAGAAATAA CCACATT AATA AATGTGG CATTACACTCACCAG TERM 5719 5611028 - 5611010 - G 70 -6 -4.16842 | opp_overlap 5611012 TCCACTTTCAATAAA GATCTTTG CCG CAAGGATC TGGTGCAGCTCCTGC TERM 5720 5611402 - 5611377 - R 100 -16.3 -5.38951 | opp_overlap 5611370 5611381 AATCTACATAAAAAA GCCCTGAACAT CTTC ATGTTCAGGGC CTTCAAATACTTAGC Swoo_4642 5613251 - 5611440 - | GTP-binding protein TypA TERM 5721 5613599 - 5613581 - H 73 -3.9 -5.04222 | TAATTAAATTAAAAA TAAAAGG GATAT CCCTTTA CTCTACTCGGAGACT Swoo_4643 5613619 - 5615028 + | glutamine synthetase, type I TERM 5722 5615052 - 5615069 + F 100 -9.9 -5.85244 | opp_overlap 5615052 CGATATCTTCTAAAA GCCCTAA TTTA TTAGGGC TTTTTTGTTTTCCTT TERM 5723 5615069 - 5615052 - f 85 -9.9 -4.10657 | opp_overlap 5615052 CGATATCTTCTAAAA GCCCTAA TTTA TTAGGGC TTTTTTGTTTTCCTT Swoo_4644 5615195 - 5616151 + | NMT1/THI5-like domain-containing protein TERM 5724 5618892 - 5618877 - g 72 -3.2 -4.93365 | GGTGACAAGGAAAAA TGCCTA GCGA TCGGCA TGAATGACTATATCT Swoo_4645 5616153 - 5618999 + | multi-sensor hybrid histidine kinase TERM 5725 5620103 - 5620118 + G 72 -6.8 -4.1552 | ATTTGTTATTGGAGG CGTACC AGGA GGTGCG TTTCTTGGAGAGATA Swoo_4646 5619090 - 5620307 + | sodium:dicarboxylate symporter Swoo_4647 5620304 - 5620723 + | hypothetical protein TERM 5726 5620808 - 5620782 - T 100 -15.2 -5.26875 | opp_overlap 5620782 TTTGCAATGAAAAAA GCCCAAGCTAGC GAC GTTAGCTTGGGC TTGCTGCAACGCTAA TERM 5727 5620782 - 5620808 + T 100 -17.4 -3.14564 | opp_overlap 5620782 TTTGCAATGAAAAAA GCCCAAGCTAGC GAC GTTAGCTTGGGC TTGCTGCAACGCTAA Swoo_4648 5622965 - 5620866 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 5728 5623085 - 5623050 - H 78 -9.2 -3.64103 | opp_overlap 5623058, overlap 5623053 TATTTACATGTCAAA CAAGTAATGCGAATAA CTAA TTATTCACTTTACTCG CATTTAATTAAGCGT TERM 5729 5623082 - 5623053 - H 72 -7.3 -3.95378 | opp_overlap 5623058, overlap 5623050 TTACATGTCAAACAA GTAATGCGAATAA CTAA TTATTCACTTTAC TCGCATTTAATTAAG TERM 5730 5623965 - 5623976 + G 70 -5.8 -4.30719 | AAGAATATTCCTCGT GGTG AACA CACC TTTGTTATCAAAGCG Swoo_4649 5623551 - 5624102 + | hypothetical protein Swoo_4650 5624226 - 5625272 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 5731 5626415 - 5626404 - g 72 -5.8 -4.46757 | opp_overlap 5626404 5626403 AAGACAGCTAGAAAA CACC TGTC GGTG GTTAATGGTGATGGC TERM 5732 5626430 - 5626471 + G 72 -7.4 -4.07568 | gap 1, overlap 5626431 GGTTAATGGTGATGG CCTCAGGGCAGGAGATTTT ACCTC AAGATCTCCC-CCCTGAGC TTTTACAAGAACCGA TERM 5733 5626431 - 5626470 + G 76 -10.9 -3.04398 | gap 1, overlap 5626430 GTTAATGGTGATGGC CTCAGGGCAGGAGATTTT ACCTC AAGATCTCCC-CCCTGAG CTTTTACAAGAACCG Swoo_4651 5625322 - 5626731 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 5734 5626755 - 5626774 + F 93 -10.8 -5.01042 | AACTACCCTCACCTA GCCTACTT ATTA AAGTAGGC TTTTTCATTTCAATT TERM 5735 5627354 - 5627320 - f 100 -15.2 -4.18161 | opp_overlap 5627328, overlap 5627328 TACAAAGCCCCAAAA GCAAAAAAGCCACCTT AAT AAGGTGGCTTCTCTAC TACTCTTTACGAGTA TERM 5736 5627328 - 5627346 + F 100 -13.2 -3.57389 | opp_overlap 5627320 5627328 CCCAAAAGCAAAAAA GCCACCTT AAT AAGGTGGC TTCTCTACTACTCTT TERM 5737 5627346 - 5627328 - f 100 -13.2 -5.46698 | opp_overlap 5627328, overlap 5627320 CCCAAAAGCAAAAAA GCCACCTT AAT AAGGTGGC TTCTCTACTACTCTT TERM 5738 5628716 - 5628727 + F 71 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5739 5629222 - 5629238 + F 75 -8 -4.08546 | overlap 5629211 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5740 5630020 - 5630032 + F 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5741 5630831 - 5630850 + F 71 -9.2 -2.65808 | opp_overlap 5630819 5630822, overlap 5630828 TAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 5742 5631882 - 5631904 + F 72 -9.2 -2.87527 | opp_overlap 5631875 5631887, overlap 5631881 GCGAGTAACGTCACA GCTAACGGTT ATT AACCGTTAAC CTTTCCTCCTCGCTG TERM 5743 5633034 - 5633020 - g 100 -8.5 -5.47431 | opp_overlap 5633020 TTAAGATACAAAAAA GGGGC TTAAC GCCCC TTCTATCTATACATA TERM 5744 5633020 - 5633034 + G 72 -8.5 -3.64912 | opp_overlap 5633020 TTAAGATACAAAAAA GGGGC TTAAC GCCCC TTCTATCTATACATA Swoo_4652 5632821 - 5633090 + | hypothetical protein Swoo_4653 5633636 - 5633061 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Swoo_4654 5634115 - 5633633 - | cytochrome c nitrite reductase, accessory protein NrfF TERM 5745 5634090 - 5634079 - G 70 -5.8 -4.43501 | opp_overlap 5634078 5634079 AAGTCAGCGATAAAA GCAG TGCG CTGC ATATTTGAACCATAT Swoo_4655 5634669 - 5634112 - | periplasmic protein thiol--disulphide oxidoreductase DsbE Swoo_4656 5636666 - 5634687 - | cytochrome c-type biogenesis protein CcmF TERM 5746 5637032 - 5637044 + H 84 -6.2 -5.28778 | CCTATCCCTACTCCT GCGG TATAT CCGC TTTTTTCTAACTAAT Swoo_4657 5637074 - 5638324 + | cytochrome c-type biogenesis protein CcmI TERM 5747 5638364 - 5638347 - T 73 -6.9 -4.11623 | opp_overlap 5638347 CATGATTAAACTAAA GGTCTGC ATTT GCAGGCC TTTTATACCAATCAG TERM 5748 5638347 - 5638364 + T 84 -9.1 -4.38712 | opp_overlap 5638347 CATGATTAAACTAAA GGTCTGC ATTT GCAGGCC TTTTATACCAATCAG TERM 5749 5638701 - 5638687 - T 100 -8.5 -5.64274 | opp_overlap 5638686 5638687 TCAGGCATAAAAAAA CCGGC TAATT GCCGG CTTTCTTACTCTTAA Swoo_4658 5639027 - 5638734 - | cytochrome c, class I TERM 5750 5638807 - 5638793 - G 73 -10 -2.98729 | opp_overlap 5638788 TACAATCAGTACACA TGCCAC CTG GTGGCA TAGCGCCTTTACCAG TERM 5751 5639700 - 5639682 - g 71 -4.6 -4.63932 | CACTGCCGAAGAAAA CCTTAACT TCA ATTTAAGG ATAAGCGGTTATGAT Swoo_4659 5639374 - 5640024 + | heme exporter protein CcmA TERM 5752 5640068 - 5640086 + G 81 -11.8 -3.10732 | TCAGACAGGCATTTT TCACGCTT TTA AAGCGTGA TCTTCAGATTGCTAT Swoo_4660 5640034 - 5640720 + | heme exporter protein CcmB Swoo_4661 5640722 - 5641468 + | heme exporter protein CcmC Swoo_4662 5641468 - 5641668 + | heme exporter protein CcmD Swoo_4663 5641665 - 5642150 + | CcmE/CycJ protein TERM 5753 5642168 - 5642183 + T 100 -10.4 -5.28176 | opp_overlap 5642168 CCTACTAACCTAAAA GGCCTC AGTC GAGGCC TTTTTTGTGCCTAGC TERM 5754 5642183 - 5642168 - T 87 -10.4 -4.30014 | opp_overlap 5642168 CCTACTAACCTAAAA GGCCTC AGTC GAGGCC TTTTTTGTGCCTAGC TERM 5755 5642859 - 5642842 - T 100 -14.1 -5.64274 | opp_overlap 5642842 TCAGGCATAAAAAAA GCCGGGC TAAT GCCCGGC TTTTTTACAATGAAA TERM 5756 5642842 - 5642859 + T 100 -14.1 -5.0538 | opp_overlap 5642842 TCAGGCATAAAAAAA GCCGGGC TAAT GCCCGGC TTTTTTACAATGAAA Swoo_4664 5643280 - 5642882 - | ribosomal protein L17 TERM 5757 5643342 - 5643352 + r 71 -6.8 -4.07885 | opp_overlap 5643338 5643341 CGTCTGCTAAACTAG CTGG AGG CCAG TTTTCAAGACGCATA Swoo_4665 5644308 - 5643319 - | DNA-directed RNA polymerase, alpha subunit Swoo_4666 5644953 - 5644333 - | ribosomal protein S4 Swoo_4667 5645382 - 5644990 - | ribosomal protein S11 TERM 5758 5645324 - 5645306 - G 70 -7.4 -3.90744 | GTGTTGTTGAAAGAA GCATGGAT ATG AGCCATGC CATCAGCAACCTGTT Swoo_4668 5645753 - 5645397 - | ribosomal protein S13 TERM 5759 5645598 - 5645612 + g 71 -8.6 -3.45768 | opp_overlap 5645597, overlap 5645609 GCGTAGTGTATCAAT TTGAGC TTC GCTCAA TTCCTTGATCTTAGC TERM 5760 5645832 - 5645864 + r 78 -9.2 -3.68222 | opp_overlap 5645833 5645834 5645851, overlap 5645834 5645845 GGTTTTGCAAATAAA ATTTTGTTCAGCCC GAACA GGGCTGAACAAATG TTGTTAGCCTTGACG TERM 5761 5645863 - 5645833 - R 100 -12.7 -4.86731 | opp_overlap 5645832 5645834 5645845, overlap 5645834 5645851 GTTTTGCAAATAAAA TTTTGTTCAGCCC GAACA GGGCTGAACAAAT GTTGTTAGCCTTGAC TERM 5762 5645862 - 5645834 - R 100 -16.2 -3.51557 | opp_overlap 5645832 5645834 5645845, overlap 5645833 5645851 TTTTGCAAATAAAAT TTTGTTCAGCCC GAACA GGGCTGAACAAA TGTTGTTAGCCTTGA TERM 5763 5645834 - 5645862 + r 100 -16.2 -3.42069 | opp_overlap 5645834 5645833 5645851, overlap 5645832 5645845 TTTTGCAAATAAAAT TTTGTTCAGCCC GAACA GGGCTGAACAAA TGTTGTTAGCCTTGA Swoo_4669 5645981 - 5645868 - | ribosomal protein L36 Swoo_4670 5647345 - 5646005 - | preprotein translocase, SecY subunit Swoo_4671 5647787 - 5647353 - | ribosomal protein L15 Swoo_4672 5647972 - 5647790 - | ribosomal protein L30 Swoo_4673 5648485 - 5647979 - | ribosomal protein S5 Swoo_4674 5648849 - 5648499 - | ribosomal protein L18 Swoo_4675 5649390 - 5648860 - | ribosomal protein L6 TERM 5764 5649180 - 5649212 + g 74 -7.7 -4.11484 | opp_overlap 5649185, overlap 5649181 5649185 CAACCATGTTATTGA TTAAAGCTCGAGCTG TAC CTGCTTGAGCGTTAG TTTTAACGCCTTCAA Swoo_4676 5649793 - 5649401 - | ribosomal protein S8 TERM 5765 5649682 - 5649693 + g 76 -5.8 -4.74103 | CTTCTTTAAGCGTTT TCGC GATA GCGA TTTTTAGCTTAGCAG Swoo_4677 5650123 - 5649818 - | ribosomal protein S14 Swoo_4678 5650673 - 5650134 - | ribosomal protein L5 Swoo_4679 5651000 - 5650686 - | ribosomal protein L24 Swoo_4680 5651380 - 5651012 - | ribosomal protein L14 TERM 5766 5651517 - 5651537 + r 83 -11.1 -3.65199 | opp_overlap 5651517 5651534 GTATTAAAATAAAAA CGGCTCCAT TGG AAGGAGCCG TTTCGGTAAAAGCTT TERM 5767 5651537 - 5651517 - R 100 -11.1 -5.50723 | opp_overlap 5651517, overlap 5651534 GTATTAAAATAAAAA CGGCTCCAT TGG AAGGAGCCG TTTCGGTAAAAGCTT TERM 5768 5651549 - 5651565 + r 75 -8.1 -3.7791 | opp_overlap 5651549 GCCGTTTCGGTAAAA GCTTAAT AAA ATTAAGC TTTAGTCACTACTTC TERM 5769 5651565 - 5651549 - R 79 -8.1 -4.07568 | opp_overlap 5651549 GCCGTTTCGGTAAAA GCTTAAT AAA ATTAAGC TTTAGTCACTACTTC Swoo_4681 5651808 - 5651560 - | ribosomal protein S17 TERM 5770 5651608 - 5651588 - G 72 -10.5 -2.91452 | opp_overlap 5651584 ACTACTTCAACCAGA GTCCAAGAC TTA GTCTTAGAC AGCGGACGGCATTCG Swoo_4682 5651999 - 5651808 - | ribosomal protein L29 Swoo_4683 5652409 - 5651999 - | ribosomal protein L16 Swoo_4684 5653110 - 5652421 - | ribosomal protein S3 Swoo_4685 5653452 - 5653120 - | ribosomal protein L22 Swoo_4686 5653746 - 5653468 - | ribosomal protein S19 Swoo_4687 5654585 - 5653758 - | ribosomal protein L2 Swoo_4688 5654901 - 5654602 - | ribosomal protein L25/L23 Swoo_4689 5655503 - 5654898 - | ribosomal protein L4/L1e Swoo_4690 5656158 - 5655520 - | ribosomal protein L3 Swoo_4691 5656494 - 5656183 - | ribosomal protein S10 TERM 5771 5656567 - 5656528 - R 75 -2.3 -5.4251 | gap 2, opp_overlap 5656528, overlap 5656531 TGGACACATAAAAAA TCACCCTCTAGCTTCTTCT ATTT AGAA-AAGC-AGAGCGAGA TGATTTAACCGTTCG TERM 5772 5656846 - 5656881 + r 83 -10.6 -3.73402 | opp_overlap 5656856, overlap 5656856 GACATATAATTTAGG CATAAAAAAAGGAAGC CGAA GCTTCCTTTTTGGATG TTTAGTAAAGAGTAT TERM 5773 5656856 - 5656871 + r 88 -9 -4.77986 | opp_overlap 5656856, overlap 5656846 TTAGGCATAAAAAAA GGAAGC CGAA GCTTCC TTTTTGGATGTTTAG TERM 5774 5656871 - 5656856 - R 100 -9 -5.64274 | opp_overlap 5656856 5656846 TTAGGCATAAAAAAA GGAAGC CGAA GCTTCC TTTTTGGATGTTTAG Swoo_4692 5658086 - 5656902 - | translation elongation factor Tu TERM 5775 5658131 - 5658111 - R 90 -11.9 -3.85698 | CTTTCTTTTCAGAAA TGCTCGGCT TAT AACCGAGCA ATAGCAATTAATTTA Swoo_4693 5660267 - 5658171 - | translation elongation factor G TERM 5776 5660339 - 5660312 - R 100 -14.2 -3.41125 | overlap 5660314 CTTAGAGATGTAGAA TATGGAGCTGGC TATT GCCAGCTCCATC AGATTACCAGCGGTA TERM 5777 5660337 - 5660314 - R 100 -16.8 -3.27436 | overlap 5660312 TAGAGATGTAGAATA TGGAGCTGGC TATT GCCAGCTCCA TCAGATTACCAGCGG Swoo_4694 5660813 - 5660343 - | ribosomal protein S7 Swoo_4695 5661268 - 5660894 - | ribosomal protein S12 TERM 5778 5661434 - 5661402 - R 76 -10 -3.15909 | opp_overlap 5661411, overlap 5661411 TTAACCAATATAAAG TAAAAAAAAGGCGC TAAAC GCGCCTTTTTTACA ATCTATTTACTTTTG TERM 5779 5661411 - 5661425 + r 91 -8.5 -5.08169 | opp_overlap 5661402 5661411 ATAAAGTAAAAAAAA GGCGC TAAAC GCGCC TTTTTTACAATCTAT TERM 5780 5661425 - 5661411 - R 100 -8.5 -6.0458 | opp_overlap 5661411, overlap 5661402 ATAAAGTAAAAAAAA GGCGC TAAAC GCGCC TTTTTTACAATCTAT Swoo_4696 5665677 - 5661460 - | DNA-directed RNA polymerase, beta' subunit TERM 5781 5665729 - 5665702 - R 74 -9.8 -2.82595 | opp_overlap 5665702 5665703, overlap 5665701 CTGAAGGAGTTAAAC CGGGTGCCCTGC TATT GCAAGGCACCAA TTTATTGCCAAACTA TERM 5782 5665703 - 5665728 + r 70 -8.9 -3.08991 | opp_overlap 5665702 5665701, overlap 5665702 TGAAGGAGTTAAACC GGGTGCCCTGC TATT GCAAGGCACCA ATTTATTGCCAAACT TERM 5783 5665742 - 5665756 + r 84 -8.6 -4.44797 | opp_overlap 5665742 CAATTTATTGCCAAA CTAGTG TGT CACTAG TTTTAGTCTTGATCC TERM 5784 5665756 - 5665742 - R 74 -8.6 -3.58269 | opp_overlap 5665742 CAATTTATTGCCAAA CTAGTG TGT CACTAG TTTTAGTCTTGATCC Swoo_4697 5669790 - 5665759 - | DNA-directed RNA polymerase, beta subunit TERM 5785 5669367 - 5669392 + g 70 -6.1 -4.21194 | AAACGATAACACGCT CAGTACCATTG ATAA CAAAGGTACCG TTTTCAGTCATCAGA TERM 5786 5669989 - 5669964 - R 100 -13.3 -5.08169 | ATACAGCGCAAAAAA GGCCGACGGTT AAAA AACCGCCAGCC CTCGCCTGATTGCTC TERM 5787 5670011 - 5670031 + r 80 -9.9 -3.65415 | opp_overlap 5670015, overlap 5670007 TGATTGCTCAGGCTA GTAAGTTAA AAT TTAACTTAC TTGATTTCTACTTCA Swoo_4698 5670396 - 5670028 - | ribosomal protein L7/L12 Swoo_4699 5670942 - 5670442 - | ribosomal protein L10 TERM 5788 5671148 - 5671117 - R 82 -11.8 -3.05384 | gap 1 CGGTCTTGGACGGAA GCCTACTTTCATCAC TCA GTGACGAAA-TAGGC CCCAACCCACAAAGT Swoo_4700 5671902 - 5671201 - | ribosomal protein L1 Swoo_4701 5672335 - 5671907 - | ribosomal protein L11 TERM 5789 5672431 - 5672400 - R 100 -13.9 -4.17048 | GCTCCCCGAAAATAA TGGGTGCAGATTC TATAAC AAATCTGCACCCA GTCCAAATGTTTTTT Swoo_4702 5673011 - 5672460 - | NusG antitermination factor Swoo_4703 5673392 - 5673021 - | preprotein translocase, SecE subunit TERM 5790 5673629 - 5673600 - R 100 -12.3 -5.42862 | opp_overlap 5673600 5673607, overlap 5673607 ATATCCGTAAAAAAA CAAAAAAGGAAGC CGAA GCTTCCTTTTTGG ATGTTTAGTAAAGAG TERM 5791 5673600 - 5673629 + r 85 -12.3 -2.66695 | opp_overlap 5673600 5673607, overlap 5673607 ATATCCGTAAAAAAA CAAAAAAGGAAGC CGAA GCTTCCTTTTTGG ATGTTTAGTAAAGAG TERM 5792 5673622 - 5673607 - R 100 -9 -6.12458 | opp_overlap 5673600 5673607, overlap 5673600 TAAAAAAACAAAAAA GGAAGC CGAA GCTTCC TTTTTGGATGTTTAG TERM 5793 5673607 - 5673622 + r 88 -9 -4.77986 | opp_overlap 5673607 5673600, overlap 5673600 TAAAAAAACAAAAAA GGAAGC CGAA GCTTCC TTTTTGGATGTTTAG Swoo_4704 5674837 - 5673653 - | translation elongation factor Tu TERM 5794 5674912 - 5674889 - H 89 -6 -5.55769 | opp_overlap 5674889, overlap 5674891 GCGTACAACAAAAAA TCCGATGCAT TTAA AGGCATCGAA TCGATTAATTTTTTT TERM 5795 5674997 - 5674984 - H 70 -8.1 -3.28745 | opp_overlap 5674981 TTTTTAATAACCTAA CCCCT TTTC AGGGG GCACTCTTTATTGAG TERM 5796 5676055 - 5676028 - g 73 -4.9 -4.66938 | gap 1, opp_overlap 5676031 5676043, overlap 5676029 5676031 ATCTCCAACATAAAA GCAGGAGCCCCT TATGT AGAAGCTCCT-C TCTACTCTCATGTTA Swoo_4705 5675536 - 5676486 + | pantothenate kinase Swoo_4706 5677464 - 5676502 - | biotin--acetyl-CoA-carboxylase ligase Swoo_4707 5678488 - 5677457 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 5797 5679546 - 5679587 + H 82 -11.8 -3.02511 | gap 1, opp_overlap 5679556, overlap 5679556 TCCTTCCAGGCTAAA AACGAAAAAAGCCCTAGCG TTTTC TGCTAGGGC-TTTTTCGTG TATTAGGCGCCTGGA TERM 5798 5679578 - 5679556 - H 100 -10.6 -5.54079 | opp_overlap 5679556 5679546 CTAAAAACGAAAAAA GCCCTAGC GTTTTCT GCTAGGGC TTTTTCGTGTATTAG TERM 5799 5679556 - 5679578 + H 93 -11.3 -4.87807 | opp_overlap 5679556, overlap 5679546 CTAAAAACGAAAAAA GCCCTAGCG TTTTC TGCTAGGGC TTTTTCGTGTATTAG TERM 5800 5680934 - 5680945 + H 71 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5801 5681440 - 5681456 + H 75 -8 -4.08546 | overlap 5681429 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5802 5682238 - 5682250 + H 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5803 5682957 - 5682989 + H 73 -9.3 -3.0094 | opp_overlap 5682958, overlap 5682964 GAGCGGGCTTAAAAA AGCCAAAGATAAAGT GTT AGTTTATCTTTGGCA TCTCTATCCATGAGC TERM 5804 5682988 - 5682958 - H 100 -12.8 -5.00884 | opp_overlap 5682957 5682964 AGCGGGCTTAAAAAA GCCAAAGATAAAGT GTT AGTTTATCTTTGGC ATCTCTATCCATGAG TERM 5805 5683163 - 5683145 - H 76 -7.4 -4.28656 | overlap 5683131 5683148 AGCCAAGACTTAAAA GATTTGGC GAA GCCAATTC GAGTGAGACAAGGCT TERM 5806 5683586 - 5683605 + H 71 -9.2 -2.65808 | opp_overlap 5683574 5683577, overlap 5683583 TAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 5807 5684636 - 5684658 + H 72 -9.2 -2.87527 | opp_overlap 5684629 5684641, overlap 5684635 GCGAGTAACGTCACA GCTAACGGTT ATT AACCGTTAAC CTTTCCTCCTCGCTG Swoo_4708 5685838 - 5686308 + | RNP-1 like RNA-binding protein Swoo_4709 5687399 - 5686599 - | glutamate racemase TERM 5808 5687961 - 5687949 - g 76 -6.3 -4.58724 | GAAACAGAAGCAAAA TCTCT GAA AGAGA GATTAGCCAGCAAAT Swoo_4710 5687538 - 5688635 + | tRNA (uracil-5-)-methyltransferase TERM 5809 5688713 - 5688685 - T 100 -15.5 -3.10164 | opp_overlap 5688685 5688687 5688692, overlap 5688692 CGACCTAGCACTCAA TAAAAAAGGGCCT TAA AGGCCCTTTTCTA TATCTCTGGATTACT TERM 5810 5688685 - 5688713 + T 95 -13.3 -3.03006 | opp_overlap 5688685 5688692, overlap 5688687 5688692 CGACCTAGCACTCAA TAAAAAAGGGCCT TAA AGGCCCTTTTCTA TATCTCTGGATTACT TERM 5811 5688687 - 5688711 + T 83 -11.5 -3.06708 | opp_overlap 5688685 5688692, overlap 5688685 5688692 ACCTAGCACTCAATA AAAAAGGGCCT TAA AGGCCCTTTTC TATATCTCTGGATTA TERM 5812 5688706 - 5688692 - T 100 -11.4 -5.4833 | opp_overlap 5688687 5688685 5688692, overlap 5688685 GCACTCAATAAAAAA GGGCCT TAA AGGCCC TTTTCTATATCTCTG TERM 5813 5688692 - 5688706 + T 100 -11.4 -4.6645 | opp_overlap 5688692 5688685, overlap 5688687 5688685 GCACTCAATAAAAAA GGGCCT TAA AGGCCC TTTTCTATATCTCTG Swoo_4711 5689338 - 5688724 - | TetR family transcriptional regulator TERM 5814 5688985 - 5688947 - G 71 -5.3 -4.52857 | gap 1, overlap 5688948 AGCTCTGAGATAAAA TGCTCAATTTCACG-GGC AACC GCCGCACGAAATGGAGCC GAAGTACCAGAACGT TERM 5815 5689691 - 5689708 + G 73 -4.9 -4.65032 | gap 1, opp_overlap 5689691 CACAAAACCTATAAA GCGAA-AG CAC CTGTTCGC TTTCTTTATGCTTTA TERM 5816 5690063 - 5690076 + G 73 -5.3 -4.73297 | CTAAGACTGGTTGTT GTACA CCAC TGTAC TTTCTTTATTAATTC Swoo_4712 5689490 - 5690596 + | stearoyl-CoA 9-desaturase TERM 5817 5690625 - 5690653 + F 76 -5.3 -5.01546 | ATACCAAGTTGTATA TGAGGGCTCCT ATTGATA AAGAGTCCTCA TTTTTCTCTAAATTT Swoo_4713 5690761 - 5691816 + | selenide, water dikinase Swoo_4714 5691816 - 5692922 + | tRNA 2-selenouridine synthase TERM 5818 5692976 - 5692957 - T 74 -8.6 -3.70751 | opp_overlap 5692957, overlap 5692948 TAACAAGCTCAACAA TAGCCCTC ATTT AAGGGCTA TTTTTTTAGCTTTTT TERM 5819 5692957 - 5692976 + T 100 -7.9 -5.63857 | opp_overlap 5692957 5692948 TAACAAGCTCAACAA TAGCCCT CATTTA AGGGCTA TTTTTTTAGCTTTTT Swoo_4715 5694263 - 5692974 - | major facilitator transporter TERM 5820 5693989 - 5693975 - G 70 -6.4 -4.18197 | AGCTTTGACTGAAAA TCGCTA ACG CAGCGA ACGACATGAGTACAA Swoo_4716 5694730 - 5694269 - | GCN5-related N-acetyltransferase Swoo_4717 5695535 - 5694723 - | 3'(2'),5'-bisphosphate nucleotidase Swoo_4718 5696144 - 5695599 - | NUDIX hydrolase Swoo_4719 5696319 - 5696984 + | HAD family hydrolase TERM 5821 5697014 - 5696985 - f 76 -7.1 -4.25256 | opp_overlap 5696984 5696985 CTGTTAGCAAAATAA GCTTTTGGCGTTC GAAT GAACGCCAATGAC ATTTTCTATACATAA TERM 5822 5697400 - 5697390 - g 74 -5.4 -4.66318 | ATCAGGTTAAGAAAA CAAC TAG GTTG GTCGCAGGAAGAATT TERM 5823 5697658 - 5697672 + G 73 -4.3 -4.74917 | AGGAAGCAGCACTGA TAACG AAAGG CGTTA TTTTATCTGTTTGCT Swoo_4720 5697354 - 5698337 + | XRE family transcriptional regulator TERM 5824 5698374 - 5698405 + F 86 -8 -4.91712 | opp_overlap 5698374, overlap 5698375 CGTGGCTCCACCTAA CGTTAATGGCGTTC GAAT GAACGCCAATGACA TTTTTATCCGTTAGC TERM 5825 5698375 - 5698404 + F 85 -11.5 -3.54304 | opp_overlap 5698374, overlap 5698374 GTGGCTCCACCTAAC GTTAATGGCGTTC GAAT GAACGCCAATGAC ATTTTTATCCGTTAG TERM 5826 5698855 - 5698871 + F 78 -9.5 -3.54984 | overlap 5698852 ATTTGGTGGTCTGTT TGAAGGT CTC ACCTTCA TTACTGTTTATTGCT Swoo_4721 5699523 - 5700488 + | fatty acid desaturase TERM 5827 5700531 - 5700552 + T 78 -9.5 -3.6682 | opp_overlap 5700530 GGCGAGCTTAACTAG TTTGGCTGC TTGT GCAGTCAAA TTTAAATCAATCAAC TERM 5828 5700990 - 5701008 + T 75 -3.1 -5.26119 | opp_overlap 5700990 TATCCTTTCAAAAAT CGTTGTT CATCA AACACCG TTTTGTTTTTCAGCA Swoo_4722 5702017 - 5700974 - | transposase IS116/IS110/IS902 family protein TERM 5829 5701714 - 5701724 + g 80 -5.4 -5.10154 | CTATTTTAAAGGAGT CGAT TTT ATCG TTTTTGGTTTTACCT Swoo_4723 5702211 - 5702675 + | hypothetical protein TERM 5830 5703007 - 5703017 + T 76 -4 -5.33866 | opp_overlap 5703007 CCACAGGGCAGAAAA TGTT CCA AACA TTTTTTCTGCATTTC Swoo_4724 5703977 - 5703219 - | type II secretion system protein N TERM 5831 5703774 - 5703759 - G 71 -4.6 -4.65895 | opp_overlap 5703761, overlap 5703761 CGCCTTACCTAAAAA GAGCCC CCAA GGGCTT AACTGCCACTGAACC TERM 5832 5703772 - 5703761 - G 70 -7.2 -3.94812 | opp_overlap 5703761, overlap 5703759 CCTTACCTAAAAAGA GCCC CCAA GGGC TTAACTGCCACTGAA Swoo_4725 5704501 - 5704025 - | general secretion pathway M protein Swoo_4726 5705702 - 5704503 - | general secretion pathway protein L TERM 5833 5705792 - 5705774 - R 78 -7.4 -4.46072 | opp_overlap 5705788 CTCAACAAATATAAA GTGGGC TATTTCT GCCCAC CAAACTGTCGGGTTA Swoo_4727 5706780 - 5705779 - | general secretion pathway protein K TERM 5834 5706013 - 5705996 - G 70 -6.9 -4.09739 | opp_overlap 5705996 TCAATTTTTTCAAAA CCATCGC CTGG GCGCTGG TTAATAATACTTTCT Swoo_4728 5707574 - 5706780 - | general secretion pathway protein J Swoo_4729 5707971 - 5707552 - | general secretion pathway protein I Swoo_4730 5708533 - 5707952 - | general secretion pathway protein H Swoo_4731 5709022 - 5708588 - | general secretion pathway protein G TERM 5835 5708984 - 5709004 + g 93 -2.5 -5.87996 | opp_overlap 5708953, overlap 5708986 CACAACCATCACTTC GAGTAGGGT AAA ACCTTGCTG TTTTTTTCTTGCTTG TERM 5836 5708986 - 5709002 + g 71 -5.1 -4.55661 | opp_overlap 5708953, overlap 5708984 CAACCATCACTTCGA GTAGGGT AAA ACCTTGC TGTTTTTTTCTTGCT Swoo_4732 5710310 - 5709087 - | general secretion pathway protein F Swoo_4733 5711962 - 5710391 - | general secretory pathway protein E Swoo_4734 5714096 - 5711952 - | general secretion pathway protein D TERM 5837 5713308 - 5713319 + g 80 -5.8 -5.08824 | ACCTGTGCTGGCTTG CTCG GCAT CGAG TTTTTTCACTAACGA Swoo_4735 5715158 - 5714253 - | general secretion pathway protein C Swoo_4736 5715416 - 5715814 + | RNA-binding S4 domain-containing protein Swoo_4737 5715959 - 5716819 + | Hsp33 protein TERM 5838 5717110 - 5717145 + T 95 -14.4 -3.20029 | gap 1, opp_overlap 5717119, overlap 5717119 TATACTGATTGGTAT TAATAAAAATGCAGCTC AAT GAGCTGCATTTTT-TTA TCTGTCTTTAGCTAA TERM 5839 5717137 - 5717119 - T 100 -13.2 -5.1356 | opp_overlap 5717119 5717110 TGGTATTAATAAAAA TGCAGCTC AAT GAGCTGCA TTTTTTTATCTGTCT TERM 5840 5717119 - 5717137 + T 100 -13.2 -5.77988 | opp_overlap 5717119, overlap 5717110 TGGTATTAATAAAAA TGCAGCTC AAT GAGCTGCA TTTTTTTATCTGTCT Swoo_4738 5718920 - 5717175 - | YidE/YbjL duplication Swoo_4739 5720433 - 5719039 - | glutamate decarboxylase TERM 5841 5719827 - 5719837 + g 72 -6.8 -4.25283 | opp_overlap 5719815, overlap 5719814 CAAGTGTGGGCACTA CACC TAT GGTG TTTTCATCACAGCGT Swoo_4740 5720873 - 5722414 + | phosphoenolpyruvate carboxykinase (ATP) TERM 5842 5722401 - 5722421 + T 73 -4 -5.13741 | overlap 5722410 CGATCAAGCATGCCG GACCTAAT GCTTA ATAAGGTC TTTTTATTAGGTTAC TERM 5843 5722474 - 5722501 + T 79 -4.8 -5.29782 | TTTTTGTAAGATGAA TCCCAGTTTAGC TTAG GTTGTGCTGGGA TTTTTTATGCCTATG Swoo_4741 5723340 - 5722711 - | antibiotic biosynthesis monooxygenase Swoo_4742 5725301 - 5723385 - | hypothetical protein TERM 5844 5725155 - 5725185 + g 73 -9 -3.53444 | opp_overlap 5725161 5725163 CTGATCTATGATGAG CACAGATAGTGAGG TCA CTTCACTAGCTGGG TTTGCAGGAGGCTGC Swoo_4743 5725465 - 5726349 + | transcriptional regulator, CadC TERM 5845 5726390 - 5726417 + F 75 -6.4 -4.46267 | GTTAAACAAGCCTAT CATAAGGTAAAG CAGA CTTGACTTTATG TTTTGGTTAAATTAT Swoo_4744 5726513 - 5726935 + | hypothetical protein Swoo_4745 5726954 - 5727187 + | XRE family transcriptional regulator Swoo_4747 5728525 - 5727620 - | methionine sulfoxide reductase A TERM 5846 5728561 - 5728597 + r 76 -10.3 -2.81584 | gap 3, opp_overlap 5728557 5728568, overlap 5728560 5728563 AAGGCATTTAACGCC CACAG-CAG-CGG-CGCG TTCA CGCGTCCGACTGGCTGTG CTTGTTAGCTGCTGT Swoo_4748 5729134 - 5728613 - | hypothetical protein Swoo_4749 5730556 - 5729579 - | hypothetical protein Swoo_4750 5731171 - 5730731 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 5847 5731022 - 5731034 + g 70 -2.7 -5.01732 | ACTAAAGAAGGCTTT TGTTG CTT CAATA TTTTTTGCGGGGATT Swoo_4751 5731544 - 5732695 + | aminotransferase class I and II TERM 5848 5732758 - 5732735 - f 77 -8.2 -3.90291 | gap 1, opp_overlap 5732735 5732754 ACTCTCTTAATGAAA CACC-AGCCAC ATA ATGGCTTGGTG TTTCACATCATCTTA TERM 5849 5732735 - 5732758 + F 70 -7.5 -3.63782 | gap 1, opp_overlap 5732735, overlap 5732754 ACTCTCTTAATGAAA CACC-AGCCA CATAA TGGCTTGGTG TTTCACATCATCTTA TERM 5850 5732856 - 5732868 + F 79 -4.9 -5.28826 | AAATGTCTATTTATG TAAAG CCC CTTTA TTTTTTATCACATTT TERM 5851 5733138 - 5733124 - g 82 -7.8 -4.58213 | opp_overlap 5733124 CAAGCAAGTATAAAA CCCTAC ACA GCAGGG TTAATCATGCGCGGA TERM 5852 5734124 - 5734106 - g 71 -4.5 -4.66318 | ATTACTTCAATAAAA GTGGTTG TAGCT CAGCCAC GGTTAAGCAACGTCA Swoo_4752 5733001 - 5734215 + | hypothetical protein TERM 5853 5736303 - 5736324 + G 73 -8.9 -3.44051 | opp_overlap 5736307, overlap 5736307 GTAATGTCTGGGGAG TAAACAGTA ACAA TACTGTTTA TTATCGTGATGGAAG Swoo_4753 5734580 - 5736385 + | beta-propeller repeat-containing protein TERM 5854 5736442 - 5736412 - f 73 -3.9 -5.09173 | opp_overlap 5736417, overlap 5736413 5736417 TAACAGTTCAAAAAA TTTAAGGCCGGTT TCAAC AACCGGCCTTTTT AATGGCTGCGGCAAT TERM 5855 5736417 - 5736437 + F 100 -12.6 -4.7497 | opp_overlap 5736413 5736412 5736417 GTTCAAAAAATTTAA GGCCGGTT TCAAC AACCGGCC TTTTTAATGGCTGCG TERM 5856 5736437 - 5736417 - f 95 -12.6 -3.52177 | opp_overlap 5736417, overlap 5736413 5736412 GTTCAAAAAATTTAA GGCCGGTT TCAAC AACCGGCC TTTTTAATGGCTGCG TERM 5857 5737032 - 5737010 - g 71 -8.4 -3.48593 | TATCTGGTTAGATAA GCTGATCGCC CAG AGCGATAAGC TGAAGAAAGTGAGTA TERM 5858 5737850 - 5737839 - g 70 -7.2 -3.87149 | overlap 5737824 GCCACTAAACTCAAA GCGG CCAT CCGC AAAGATAAGTTTAGT Swoo_4754 5736708 - 5738591 + | peptidase M14 carboxypeptidase A TERM 5859 5738662 - 5738639 - f 71 -8.1 -3.52102 | opp_overlap 5738639 ATTGCAGTCATACAA TGGGAGCGG TGAAAG CCTCTCCCA TCTCCTATACCAATC TERM 5860 5740144 - 5740125 - g 81 -10.8 -3.56325 | overlap 5740119 TCTCTATAATGACAA GTTTGCCA GCCC TGGCAAAC GACTAATGGGTATGT TERM 5861 5740435 - 5740401 - g 74 -7 -4.4017 | opp_overlap 5740413 CCAAGGTGCAGAAAA GGCGCGCAAACTTCTC GAT GAGATCTTAGCTCGCC CAGAGCATGCCTGGT Swoo_4755 5739073 - 5740539 + | hypothetical protein Swoo_4756 5740596 - 5741162 + | NapC/NirT cytochrome c domain-containing protein TERM 5862 5741233 - 5741213 - T 71 -6.8 -4.16842 | opp_overlap 5741214, overlap 5741193 5741214 CTTATCTCCAACAAA GGCCGCAT TCTCC ATGCGGCT TTTTATCTTGATTGG TERM 5863 5741232 - 5741214 - T 78 -10.3 -3.09784 | opp_overlap 5741214, overlap 5741193 5741213 TTATCTCCAACAAAG GCCGCAT TCTCC ATGCGGC TTTTTATCTTGATTG TERM 5864 5741214 - 5741232 + T 93 -10.3 -5.1485 | opp_overlap 5741193 5741214 5741213 TTATCTCCAACAAAG GCCGCAT TCTCC ATGCGGC TTTTTATCTTGATTG Swoo_4757 5742141 - 5741254 - | hypothetical protein TERM 5865 5741560 - 5741533 - G 72 -10 -2.85668 | gap 1, opp_overlap 5741533 5741529 CATGGGCATAGGATA GGTGAGCAGTAGA TTA TCTACCGCT-ACC ATATCTTGATTCATA Swoo_4758 5743035 - 5742241 - | methyltransferase type 11 TERM 5866 5744016 - 5743980 - g 78 -8.3 -4.12942 | gap 2, opp_overlap 5743992 CTAAAGGTTTGAAAA TTATCGAAGCTG-G-CT CAGGC AGTCTCAGCTTCGATAA CATCGATGGCAAGGT Swoo_4759 5743289 - 5744047 + | putative lipoprotein Swoo_4760 5744956 - 5744117 - | phosphoesterase PA-phosphatase related TERM 5867 5744938 - 5744912 - G 71 -8.2 -3.72576 | opp_overlap 5744935 TCTTTGTGTATTAAA GTCAAAAGAA CTTTCCT TTCTTTTGAC CTCAACCAAAGAGGT Swoo_4761 5746108 - 5745266 - | phosphoesterase PA-phosphatase related TERM 5868 5746488 - 5746435 - R 100 -13.8 -3.82083 | gap 2, opp_overlap 5746439 5746444 5746448 5746485, overlap 5746437 5746440 5746444 TGACCATAAGTTAAA CATTACTAACCAATCTATAGAAATAT ATAT ATATTTCTATAGATTGGTTAGC--TG TTAATAGGGACAGCT TERM 5869 5746488 - 5746437 - R 100 -15.6 -3.49168 | opp_overlap 5746439 5746444 5746448 5746485, overlap 5746435 5746440 5746444 ACCATAAGTTAAACA TTACTAACCAATCTATAGAAATAT ATAT ATATTTCTATAGATTGGTTAGCTG TTAATAGGGACAGCT TERM 5870 5746439 - 5746486 + r 100 -20.4 -3.13403 | opp_overlap 5746435 5746437 5746440 5746444, overlap 5746444 5746448 5746485 CATAAGTTAAACATT ACTAACCAATCTATAGAAATAT ATAT ATATTTCTATAGATTGGTTAGC TGTTAATAGGGACAG TERM 5871 5746485 - 5746440 - R 100 -23.9 -2.87983 | opp_overlap 5746439 5746444 5746448, overlap 5746435 5746437 5746444 ATAAGTTAAACATTA CTAACCAATCTATAGAAATAT ATAT ATATTTCTATAGATTGGTTAG CTGTTAATAGGGACA TERM 5872 5746481 - 5746444 - R 100 -18.9 -3.3062 | opp_overlap 5746439 5746444 5746448, overlap 5746440 5746435 5746437 GTTAAACATTACTAA CCAATCTATAGAAATAT ATAT ATATTTCTATAGATTGG TTAGCTGTTAATAGG TERM 5873 5746444 - 5746481 + r 100 -18.9 -3.20348 | opp_overlap 5746444 5746440 5746435 5746437, overlap 5746439 5746448 GTTAAACATTACTAA CCAATCTATAGAAATAT ATAT ATATTTCTATAGATTGG TTAGCTGTTAATAGG TERM 5874 5746448 - 5746477 + r 95 -12.5 -3.406 | opp_overlap 5746444 5746440 5746435 5746437, overlap 5746444 5746439 AACATTACTAACCAA TCTATAGAAATAT ATAT ATATTTCTATAGA TTGGTTAGCTGTTAA Swoo_4762 5746812 - 5746525 - | excinuclease ABC subunit C Swoo_4763 5749030 - 5746862 - | oligopeptidase B TERM 5875 5747677 - 5747663 - G 76 -7.8 -4.24342 | TCTGGCATCAATAAA CAGACG CTC CGCCTG GTAAAGTTCACTATC TERM 5876 5749465 - 5749437 - H 72 -5.2 -4.79373 | opp_overlap 5749437 5749441 5749442 GAATATAAGACAAAA GCTAACGTTACC CTCTC GGTGACGCTTGC TCACTTGCCTCTTAT Swoo_4764 5749586 - 5750239 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 5877 5750270 - 5750297 + F 75 -8.5 -3.75629 | opp_overlap 5750269 5750266 AAGTTAGTAAATACT GTGGCTAAACA CACAAA TGATTAGCCAC TTTAACTTAACAATA TERM 5878 5753248 - 5753265 + G 76 -8.5 -3.89614 | GATCCTAAGTTTGGA TTGATCC CGCC GGATCAA TTTATCCCACTTGCC Swoo_4765 5750704 - 5753928 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 5879 5753970 - 5753934 - T 79 -8.9 -3.9642 | overlap 5753936 AAACATCTAATGAAA TAGAGCTAAGAAACA AGCCTAA TGCTTCTTAGCTCAA CCATTTCTTAACTTA TERM 5880 5753968 - 5753936 - T 85 -11.5 -3.56006 | overlap 5753934 ACATCTAATGAAATA GAGCTAAGAAACA AGCCTAA TGCTTCTTAGCTC AACCATTTCTTAACT Swoo_4766 5754523 - 5753996 - | ferroxidase TERM 5881 5755368 - 5755354 - g 71 -4.2 -4.87626 | overlap 5755356 GGCCAATATCAAAAA CTCATC GAT GATGTG GTCGAGCCTAGACTC TERM 5882 5756145 - 5756112 - g 71 -8.9 -3.42078 | gap 1, overlap 5756114 5756135 CATAGTGCAGGAGAA TATCGTGCGGCTCATA CAG CAAG-GCCGCACGACA CGAGAAGCTATCGAG TERM 5883 5756143 - 5756114 - g 71 -9.3 -3.27951 | gap 1, overlap 5756112 5756135 TAGTGCAGGAGAATA TCGTGCGGCTCATA CAG CAAG-GCCGCACGA CACGAGAAGCTATCG TERM 5884 5756938 - 5756916 - g 74 -10.6 -2.63348 | overlap 5756909 5756915 5756919 TGCAGGAACAGGAAT GAAGCTCATC ACT GATGCGCTTC CCGGCGCGGTCGTGC Swoo_4767 5754877 - 5757990 + | acriflavin resistance protein Swoo_4768 5757990 - 5759078 + | RND family efflux transporter MFP subunit TERM 5885 5759123 - 5759140 + F 100 -11.3 -5.38047 | CTCAGCGAGACTTTA GCCCACA GGAT TGTGGGC TTTTTTGTCTCAGTA TERM 5886 5760092 - 5760104 + G 71 -4.1 -4.83169 | ACGGGTGACCCGTCA GGTAA AAG TTGCC TTTTTCTCAACCGGT Swoo_4769 5759544 - 5760788 + | molybdenum cofactor synthesis domain-containing protein Swoo_4770 5760810 - 5761580 + | molybdopterin synthase sulfurylase MoeB Swoo_4771 5761792 - 5762541 + | hypothetical protein Swoo_4772 5763375 - 5762725 - | hypothetical protein Swoo_4773 5763857 - 5763372 - | ECF subfamily RNA polymerase sigma-24 factor Swoo_4774 5764620 - 5763859 - | hypothetical protein Swoo_4775 5765479 - 5764607 - | hypothetical protein TERM 5887 5765285 - 5765269 - G 73 -10.1 -2.98491 | overlap 5765260 5765284 AATCTAGAGGAGATA GCCCTCC CAA GGAGAGC CCCACACTATGGAGC Swoo_4776 5765763 - 5765479 - | hypothetical protein TERM 5888 5765972 - 5765934 - R 100 -13.2 -3.48395 | opp_overlap 5765934, overlap 5765935 AGCTTGGGTATATAA GCTCTTGGCTCCTCCT GCTGATA AGGAGGAGCCACGAGA TGACTTAGCCGATAA TERM 5889 5765934 - 5765972 + r 91 -13.2 -2.52896 | opp_overlap 5765934 5765935 AGCTTGGGTATATAA GCTCTTGGCTCCTCCT GCTGATA AGGAGGAGCCACGAGA TGACTTAGCCGATAA TERM 5890 5765971 - 5765935 - R 100 -16.7 -2.68823 | opp_overlap 5765934, overlap 5765934 GCTTGGGTATATAAG CTCTTGGCTCCTCCT GCTGATA AGGAGGAGCCACGAG ATGACTTAGCCGATA Swoo_4777 5767200 - 5765977 - | sodium/glutamate symporter TERM 5891 5767233 - 5767223 - R 74 -5.4 -4.78753 | CTAATACCAACAAAA TCGA CGA TCGA TACTAAAGCCTTTCA TERM 5892 5767484 - 5767506 + r 79 -10.6 -3.37344 | opp_overlap 5767485, overlap 5767485 AACAAGCATAACAAA ACCAGCTCTA AAG TAGAGCTGGC TTAATTAAATAAGCA TERM 5893 5767485 - 5767505 + r 91 -14.1 -2.62192 | opp_overlap 5767485, overlap 5767484 ACAAGCATAACAAAA CCAGCTCTA AAG TAGAGCTGG CTTAATTAAATAAGC TERM 5894 5767505 - 5767485 - R 100 -14.1 -4.85396 | opp_overlap 5767484 5767485 ACAAGCATAACAAAA CCAGCTCTA AAG TAGAGCTGG CTTAATTAAATAAGC Swoo_4778 5768757 - 5767534 - | sodium/glutamate symporter Swoo_4779 5769114 - 5768965 - | hypothetical protein TERM 5895 5769430 - 5769459 + r 100 -19.5 -2.92389 | opp_overlap 5769430 5769436, overlap 5769436 AGGTAGCCAACAAAA CAAAAACGCAGCC AGTT GGCTGCGTTTTTG TGTCTAAATAACTTA TERM 5896 5769459 - 5769430 - R 100 -19.5 -4.68384 | opp_overlap 5769430 5769436, overlap 5769436 AGGTAGCCAACAAAA CAAAAACGCAGCC AGTT GGCTGCGTTTTTG TGTCTAAATAACTTA TERM 5897 5769436 - 5769453 + r 100 -12.7 -5.04597 | opp_overlap 5769430 5769436, overlap 5769430 CCAACAAAACAAAAA CGCAGCC AGTT GGCTGCG TTTTTGTGTCTAAAT TERM 5898 5769453 - 5769436 - R 100 -12.7 -5.62288 | opp_overlap 5769436 5769430, overlap 5769430 CCAACAAAACAAAAA CGCAGCC AGTT GGCTGCG TTTTTGTGTCTAAAT Swoo_4780 5769659 - 5769495 - | hypothetical protein Swoo_4781 5770353 - 5769679 - | pseudouridine synthase Rlu family protein Swoo_4782 5771719 - 5770382 - | integral membrane sensor signal transduction histidine kinase Swoo_4783 5772365 - 5771688 - | two component transcriptional regulator Swoo_4784 5772910 - 5772374 - | hypothetical protein Swoo_4785 5773430 - 5773080 - | hypothetical protein Swoo_4786 5774646 - 5773540 - | ABC transporter related Swoo_4787 5775307 - 5774627 - | molybdate ABC transporter, inner membrane subunit Swoo_4788 5776117 - 5775311 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Swoo_4789 5776608 - 5776141 - | molybdopterin biosynthesis MoaE protein TERM 5899 5776631 - 5776615 - R 75 -9.3 -3.24925 | AGCGGACATGATTAA CCTCCGG TTA CCGGTGG GAAAAAGGCGACTTC Swoo_4790 5776862 - 5776611 - | molybdopterin converting factor, subunit 1 Swoo_4791 5777343 - 5776867 - | molybdenum cofactor biosynthesis protein C Swoo_4792 5777926 - 5777402 - | molybdenum cofactor biosynthesis protein B Swoo_4793 5779014 - 5778034 - | molybdenum cofactor biosynthesis protein A TERM 5900 5779326 - 5779314 - H 76 -9.1 -3.76141 | overlap 5779312 AGCATGATTAAAACA CCCGT TTA ACGGG GAAATGTACCTAGAG Swoo_4794 5779350 - 5780999 + | electron-transferring-flavoprotein dehydrogenase TERM 5901 5781036 - 5781003 - f 72 -4.8 -4.74706 | gap 2, opp_overlap 5781012, overlap 5781012 CCCAACATGTAAAAA GCAGATAAACGCACTC TTAT GAGTGCGTTT-T-TAC TTTGCAATTGTAAAT TERM 5902 5781012 - 5781029 + F 93 -11.3 -4.99134 | opp_overlap 5781003 5781012 TAAAAAGCAGATAAA CGCACTC TTAT GAGTGCG TTTTTACTTTGCAAT TERM 5903 5781029 - 5781012 - f 88 -11.3 -4.23207 | opp_overlap 5781012, overlap 5781003 TAAAAAGCAGATAAA CGCACTC TTAT GAGTGCG TTTTTACTTTGCAAT Swoo_4795 5781208 - 5783124 + | methyl-accepting chemotaxis sensory transducer TERM 5904 5783181 - 5783139 - T 93 -13.7 -2.75803 | gap 1, opp_overlap 5783173, overlap 5783141 5783172 ATAACATCGGAATGA TATTGCC-AGTTCCTAGACT CTTG AGCCTAGGAACTCGGCACTA AACCGATTAGTTTCG TERM 5905 5783179 - 5783141 - T 87 -11.9 -2.92018 | gap 1, opp_overlap 5783173, overlap 5783139 5783172 AACATCGGAATGATA TTGCC-AGTTCCTAGACT CTTG AGCCTAGGAACTCGGCAC TAAACCGATTAGTTT Swoo_4796 5783580 - 5783188 - | hypothetical protein Swoo_4797 5784299 - 5783601 - | MOSC domain-containing protein Swoo_4798 5785800 - 5784343 - | diguanylate cyclase TERM 5906 5785197 - 5785216 + g 72 -7.2 -4.08394 | GGCGGTTATAACGTT GCTGATAG AGTT TTATCAGC TTTTGCACCCGCTCT TERM 5907 5785742 - 5785732 - G 72 -3.2 -4.92756 | ACTAGTAAAAATAAA TGCC GTT AGCA AAAGAACCGATAGGA TERM 5908 5785952 - 5785932 - R 100 -13.3 -5.56673 | ATTTAGAATAAAAAA TGCCCCGCT GTT AGCGAGGCA AAAATAGGAAGGAAA Swoo_4799 5786904 - 5786065 - | ribokinase-like domain-containing protein Swoo_4800 5787390 - 5786989 - | GCN5-related N-acetyltransferase Swoo_4801 5787952 - 5787404 - | GCN5-related N-acetyltransferase Swoo_4802 5788241 - 5787963 - | antibiotic biosynthesis monooxygenase Swoo_4803 5788585 - 5788794 + | hypothetical protein Swoo_4804 5789709 - 5788840 - | LysR family transcriptional regulator Swoo_4805 5789827 - 5790162 + | hypothetical protein TERM 5909 5790180 - 5790200 + T 100 -14.1 -4.25104 | opp_overlap 5790180 ACAGACAACAAAAAA GGTTGAAGC TCA GCTTCAACC TTTTAATCAAAAAAA TERM 5910 5790200 - 5790180 - T 100 -14.1 -5.62045 | opp_overlap 5790180 ACAGACAACAAAAAA GGTTGAAGC TCA GCTTCAACC TTTTAATCAAAAAAA Swoo_4806 5791565 - 5790228 - | coproporphyrinogen dehydrogenase TERM 5911 5791816 - 5791791 - R 100 -13.3 -5.04597 | opp_overlap 5791791 5791793 ACCCAGATATAAAAA CACCCCGCAAG TTTC CCTGCGAGGTG TGTTAAAAAGCTCTT Swoo_4807 5792825 - 5791851 - | formate dehydrogenase, gamma subunit TERM 5912 5792877 - 5792830 - R 76 -10.6 -2.62933 | opp_overlap 5792841, overlap 5792832 CAATTGTTCATATTA CATCCTTATCTTCCACACCATG TCGC CATGGTGTGGATAATTGGGCTG AATACAGGCTAGGGA TERM 5913 5792841 - 5792866 + r 100 -16.3 -2.73681 | opp_overlap 5792832 5792830 ATTACATCCTTATCT TCCACACCATG TCGC CATGGTGTGGA TAATTGGGCTGAATA Swoo_4808 5793462 - 5792893 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Swoo_4809 5796347 - 5793492 - | molybdopterin oxidoreductase TERM 5914 5793939 - 5793962 + g 71 -9.6 -3.12668 | GTCTTGCAATGTCTT GTACAGCGTC GGCA GACGGTGTAC TTGCATATCAGCGTA Swoo_4810 5796563 - 5796366 - | formate dehydrogenase region TAT target TERM 5915 5796800 - 5796787 - R 77 -6.7 -4.61231 | overlap 5796789 TCAGATCTCGAAAAA GAGGT TATT ACCTC TAAAGTGTTAACCGA TERM 5916 5797064 - 5797083 + r 86 -9.2 -4.44284 | opp_overlap 5797064 AGCTCCCATAAAAAA GCCCCAGC TAAT GCTAGGGC TTTTGATCTTCAATT TERM 5917 5797083 - 5797064 - R 100 -11.4 -5.24531 | opp_overlap 5797064 AGCTCCCATAAAAAA GCCCCAGC TAAT GCTAGGGC TTTTGATCTTCAATT Swoo_4811 5798130 - 5797117 - | formate dehydrogenase, gamma subunit TERM 5918 5797875 - 5797885 + g 71 -4 -4.77896 | CAGGTGTCAGGTATT CATT CTT AATG TTTTTGCCTTCATTA TERM 5919 5798176 - 5798147 - R 95 -14.5 -3.02511 | gap 1, opp_overlap 5798148 GTCACTCCTTTAAGA GTTGAGTTGTGAGC TAA GCTCACAACTCA-C TTCACTTACGCGCCA TERM 5920 5798148 - 5798176 + r 100 -14.7 -3.17075 | opp_overlap 5798147 TCACTCCTTTAAGAG TTGAGTTGTGAGC TAA GCTCACAACTCAC TTCACTTACGCGCCA Swoo_4812 5798772 - 5798182 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Swoo_4813 5801648 - 5798799 - | molybdopterin oxidoreductase Swoo_4814 5801884 - 5801687 - | formate dehydrogenase region TAT target TERM 5921 5801931 - 5801913 - R 79 -11 -2.90813 | opp_overlap 5801912, overlap 5801910 TATTTGCTTAAATGA GGCCAACC TGA GATTGGCC CTATGATGGTTGAAG Swoo_4815 5802715 - 5802023 - | cytoplasmic chaperone TorD family protein Swoo_4816 5804408 - 5802726 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5922 5804274 - 5804254 - G 100 -13.3 -3.53444 | TTACCCGCCGCTAAA CGAGCCAGA TCT TCTGGCCCG ATAACTAACACGTTT Swoo_4817 5805239 - 5804646 - | hypothetical protein Swoo_4818 5805709 - 5805239 - | hypothetical protein TERM 5923 5806393 - 5806369 - g 71 -4.9 -4.53705 | AACTCTCAGAGAAAA CCGTGACTACA GGT TGTGGCCAAGG AACTGTTTATGGTGG Swoo_4819 5805999 - 5806895 + | formate dehydrogenase subunit FdhD Swoo_4820 5806939 - 5807844 + | DNA binding domain-containing protein TERM 5924 5807926 - 5807946 + T 100 -9 -5.47964 | GGGCAAGTTTGAATT GGGTCGAT TGAAC ATCGGCCC TTTTTGTTGTTTTCT Swoo_4821 5808703 - 5808359 - | hypothetical protein Swoo_4822 5809481 - 5808798 - | pirin domain-containing protein Swoo_4823 5810112 - 5809681 - | GCN5-related N-acetyltransferase Swoo_4824 5811405 - 5810257 - | hypothetical protein TERM 5925 5811490 - 5811469 - R 72 -9.5 -2.8001 | ACAAGGCGGATTATA CCGTTAACT GGGG AGCTAACGG CAATCATAGAGGGGA Swoo_4825 5811987 - 5811535 - | flagellar basal body-associated protein FliL TERM 5926 5812328 - 5812279 - g 74 -10.1 -3.18268 | gap 1, opp_overlap 5812294 5812298, overlap 5812276 5812277 TTTGAAGTAAAAGTA CTCGGAGAGGGCACATTAACCCCT TTT AGCGGTGAATTT-CCCTCTCAGAG CCAAGCTTGGGTACG Swoo_4826 5812114 - 5812674 + | chorismate lyase Swoo_4827 5815568 - 5812671 - | M6 family metalloprotease TERM 5927 5813815 - 5813832 + g 74 -9.9 -3.37354 | opp_overlap 5813806 TAAACAGAGCTCGCT CCTTGAG TCAG CTCAAGG TTATCGATAACTATC Swoo_4828 5816514 - 5815912 - | multiple antibiotic resistance (MarC)-related protein TERM 5928 5816306 - 5816288 - G 72 -8.8 -3.61105 | overlap 5816286 AGAAAGAGAATAATA CCGCCAGC GAT GCTGACAG ACTCTGATTTTAAGT TERM 5929 5816465 - 5816451 - G 76 -2.8 -5.19261 | overlap 5816453 AAATGGAGGAAAAAA TCGGCA GAT TACCAA GCGGATCCATGATCA Swoo_4829 5816772 - 5818319 + | hypothetical protein TERM 5930 5818513 - 5818503 - g 74 -6.8 -4.4009 | overlap 5818481 CTGGATGCCAGAAAA CGAG TTA CTCG CAGGGAAAGATCTTC Swoo_4830 5818384 - 5819142 + | hypothetical protein Swoo_4831 5819705 - 5819283 - | hypothetical protein Swoo_4832 5819729 - 5820373 + | phospholipid/glycerol acyltransferase TERM 5931 5820985 - 5821021 + G 70 -7.4 -3.92522 | gap 1, opp_overlap 5820981 5820989, overlap 5820987 5820989 CCTGAAAACCAGCAA TAAACTG-CACTGGTTC GATC GAACCAGTGGCGGTGTG TTTATCAGCTTAGCG TERM 5932 5821016 - 5820989 - g 84 -8.4 -4.31737 | opp_overlap 5820987 5820985 5820989, overlap 5820981 AAAACCAGCAATAAA CTGCACTGGTTC GATC GAACCAGTGGCG GTGTGTTTATCAGCT TERM 5933 5820989 - 5821017 + G 76 -10.4 -3.34646 | gap 1, opp_overlap 5820981 5820989, overlap 5820987 5820985 AAAACCAGCAATAAA CTG-CACTGGTTC GATC GAACCAGTGGCGG TGTGTTTATCAGCTT Swoo_4833 5820437 - 5821063 + | lysine exporter protein LysE/YggA TERM 5934 5821116 - 5821085 - T 77 -6.7 -4.58466 | gap 1 GCTAGAAGCATAAAA GCTG-GATTCTGAA ATCAG TTCAGAATCACGGC TAACGCACTTAGCTT Swoo_4834 5822411 - 5821146 - | MscS mechanosensitive ion channel Swoo_4835 5822602 - 5823138 + | hypothetical protein Swoo_4836 5823185 - 5823853 + | hypothetical protein TERM 5935 5823875 - 5823913 + T 100 -14.8 -3.09327 | gap 1, opp_overlap 5823875 5823881, overlap 5823881 CACATCATTGTTAAA CGAAAA-GCCTGAAGGG TTTGCT CCCTTCGGGCTTTTTCG TATTAAGTCCCATAA TERM 5936 5823913 - 5823875 - T 95 -12.6 -3.5882 | gap 1, opp_overlap 5823875 5823881, overlap 5823881 CACATCATTGTTAAA CGAAAA-GCCTGAAGGG TTTGCT CCCTTCGGGCTTTTTCG TATTAAGTCCCATAA TERM 5937 5823881 - 5823906 + T 100 -12.6 -4.88228 | opp_overlap 5823875 5823881, overlap 5823875 ATTGTTAAACGAAAA GCCTGAAGGG TTTGCT CCCTTCGGGC TTTTTCGTATTAAGT TERM 5938 5823906 - 5823881 - T 89 -10.4 -4.55128 | opp_overlap 5823881 5823875, overlap 5823875 ATTGTTAAACGAAAA GCCTGAAGGG TTTGCT CCCTTCGGGC TTTTTCGTATTAAGT TERM 5939 5824075 - 5824088 + T 75 -9.5 -3.29471 | opp_overlap 5824075 AACTGGCAGCAAAAA GGGCC CGAA GGCCC TTCATATCATCACAG TERM 5940 5824088 - 5824075 - T 90 -9.5 -4.73388 | opp_overlap 5824075 AACTGGCAGCAAAAA GGGCC CGAA GGCCC TTCATATCATCACAG Swoo_4837 5825665 - 5824133 - | histidine ammonia-lyase TERM 5941 5824974 - 5824958 - G 71 -7.9 -3.74519 | AATACGTGGATCAAA TGGGCTG CGA CTGCCCA TGGCAGCTTCGACGC TERM 5942 5825435 - 5825449 + g 71 -10 -2.81584 | overlap 5825434 5825432 5825445 AAGTACGATTGAGCG CTGCAG TAG CTGCAG ATCTTTATCTTCAAT TERM 5943 5825631 - 5825645 + g 71 -7.8 -3.79747 | CGGATCTGCGACAGG GTCAGG GTA CCTGGC TTTAATACTAAATGG Swoo_4838 5827338 - 5825668 - | urocanate hydratase TERM 5944 5825698 - 5825713 + g 71 -4.6 -4.61231 | overlap 5825685 5825684 TGGCAGGTCTAAGCC CTGCTC TTTA GCGCAG TTTTTAGCGATATCA TERM 5945 5827057 - 5827035 - G 74 -10 -3.18264 | opp_overlap 5827038 5827041, overlap 5827038 5827041 GGTTTGAGTTAGCAA TAATAACGCG GGG CGCATTATTA TGGGTCTTGAAAACC TERM 5946 5827376 - 5827390 + r 70 -8.6 -3.21096 | overlap 5827375 ATCTGTTTCTTATCA CTCTCT TTT AGAGAG CTTTGGTTTTATTTG Swoo_4839 5828283 - 5827582 - | histidine utilization repressor TERM 5947 5827886 - 5827861 - G 74 -7.5 -4.2704 | TTTAGGATTAACAAA GCGCTCCTCTA GCTG CAGAGGCACGC CATCTTCACAGTGAA TERM 5948 5827946 - 5827968 + g 85 -11.3 -3.56273 | opp_overlap 5827944, overlap 5827948 GCTTCTAACCCAAGC GCGATGGCG ATAGG CGCTATCGC TTCTATGCTAGTGAG Swoo_4840 5828540 - 5829766 + | imidazolonepropionase Swoo_4841 5830461 - 5830036 - | hypothetical protein Swoo_4842 5830550 - 5830993 + | hypothetical protein Swoo_4843 5831580 - 5831032 - | OmpA domain-containing protein Swoo_4844 5834468 - 5831784 - | hypothetical protein Swoo_4845 5835937 - 5834750 - | hypothetical protein TERM 5949 5835396 - 5835384 - G 81 -6.3 -4.89477 | opp_overlap 5835384 TCTTTAATAACAAAA GCAAA ATC TTTGC TTAATACAGGGCTTG TERM 5950 5835742 - 5835754 + g 71 -4.9 -4.45738 | opp_overlap 5835742 5835734 AGTCAAATAGCACAA GATAA CGT TTATC TTTGTTATTAAAGTA Swoo_4846 5836715 - 5835975 - | LytTR family two component transcriptional regulator Swoo_4847 5837841 - 5836693 - | signal transduction histidine kinase, LytS TERM 5951 5837755 - 5837726 - G 71 -2.1 -5.13343 | gap 1, overlap 5837746 CAAGTCAAAATAAAA TGCAGCCAAAACAT AAT AAGCAT-GGCTGCA CGGTAACTCTTACTT Swoo_4848 5839063 - 5837822 - | hypothetical protein Swoo_4849 5839776 - 5839057 - | ABC transporter related TERM 5952 5839224 - 5839246 + g 76 -8.4 -3.97209 | overlap 5839243 ATAACGCCATAATCT CCTGGGTTGT CTT ACTATCCAGG TTTCCTGTTGGTTCA Swoo_4850 5840920 - 5839763 - | RND family efflux transporter MFP subunit Swoo_4851 5841649 - 5840951 - | hypothetical protein TERM 5953 5841895 - 5841852 - R 100 -7.8 -5.18726 | gap 1, opp_overlap 5841859, overlap 5841856 CGGTTACAACAAAAA TAAATAAGCGCTTAAACTTCA CAT TCAAGTTTAAACGCTTAC-TA GAATTATCTTCAAAA TERM 5954 5841892 - 5841856 - R 100 -13.3 -5.09221 | opp_overlap 5841859, overlap 5841852 TACAACAAAAATAAA TAAGCGCTTAAACTTCA CAT TCAAGTTTAAACGCTTA CTAGAATTATCTTCA Swoo_4852 5842117 - 5841905 - | hypothetical protein Swoo_4853 5843061 - 5842141 - | hypothetical protein Swoo_4854 5844342 - 5843374 - | hypothetical protein Swoo_4855 5845583 - 5846260 + | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase TERM 5955 5846312 - 5846293 - T 90 -12.2 -3.55368 | opp_overlap 5846293 ATTGAATTTATATAA GGCACTCA ACAT TGAGTGCC TTTTTTTATGGTTAA TERM 5956 5846293 - 5846312 + T 100 -12.2 -5.71983 | opp_overlap 5846293 ATTGAATTTATATAA GGCACTCA ACAT TGAGTGCC TTTTTTTATGGTTAA Swoo_4856 5847088 - 5846324 - | hypothetical protein TERM 5957 5846723 - 5846706 - G 73 -2.7 -5.10933 | overlap 5846710 TTAGCGAAAATAAAA GCATG GCCATATT CATGC CCTAAAGTGTGCAGT Swoo_4857 5847198 - 5847629 + | thioesterase superfamily protein Swoo_4858 5847664 - 5847909 + | hypothetical protein Swoo_4859 5848326 - 5847922 - | thioesterase superfamily protein TERM 5958 5848451 - 5848466 + r 84 -9 -4.46609 | opp_overlap 5848451, overlap 5848444 ACTAGAATCAAAAAA GGATGC CTAA GCATCC TTTCTGTTGTTTTAT TERM 5959 5848466 - 5848451 - R 100 -9 -5.33848 | opp_overlap 5848451 5848444 ACTAGAATCAAAAAA GGATGC CTAA GCATCC TTTCTGTTGTTTTAT Swoo_4860 5850287 - 5848491 - | AMP-dependent synthetase and ligase TERM 5960 5848711 - 5848731 + g 79 -9.7 -3.81488 | CGTAGCAGCTCTATC GGGGACTCA TAA TGAATCCCC TTCTCTTTAGCCCAC Swoo_4861 5851701 - 5850415 - | hypothetical protein Swoo_4862 5852540 - 5851698 - | ABC transporter related TERM 5961 5851984 - 5851974 - G 72 -6.8 -4.27617 | GATATGGGATGAAAA CAGC ACT GCTG AACCTGATTCTATCG Swoo_4863 5852944 - 5852567 - | GntR family transcriptional regulator TERM 5962 5853995 - 5854012 + G 79 -9.9 -3.86015 | GAGGTAAGTTTATGG GTGCCAT TCGC ATGGCAC TTTATGCGCCCAATA Swoo_4864 5853034 - 5854617 + | TAP domain-containing protein Swoo_4865 5854610 - 5855344 + | ABC transporter related TERM 5963 5856201 - 5856213 + G 72 -3.4 -4.91046 | CGCCTTGATGGCCGC TAGC CTACA GCTA TTTGTTTCTTTTATG Swoo_4866 5855341 - 5856504 + | ABC-2 type transporter Swoo_4867 5856583 - 5856834 + | hypothetical protein Swoo_4868 5856848 - 5857084 + | hypothetical protein Swoo_4869 5858131 - 5857118 - | AraC family transcriptional regulator Swoo_4870 5858278 - 5858463 + | hypothetical protein Swoo_4871 5859089 - 5858556 - | molybdenum cofactor synthesis domain-containing protein Swoo_4872 5859798 - 5859247 - | NLP/P60 protein Swoo_4873 5861102 - 5859918 - | hypothetical protein TERM 5964 5861186 - 5861162 - R 100 -9.3 -5.2112 | opp_overlap 5861165, overlap 5861165 AATAGCACCAAAAAA TAAGGGCGCTA TTT TAGCACCCTTT TAGATTCTTGTATGA TERM 5965 5861165 - 5861183 + r 84 -8.8 -4.37734 | opp_overlap 5861162 5861165 AGCACCAAAAAATAA GGGCGCTA TTT TAGCACCC TTTTAGATTCTTGTA TERM 5966 5861183 - 5861165 - R 90 -11 -4.68456 | opp_overlap 5861165, overlap 5861162 AGCACCAAAAAATAA GGGCGCTA TTT TAGCACCC TTTTAGATTCTTGTA Swoo_4874 5862235 - 5861216 - | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 5967 5861539 - 5861522 - G 72 -7.7 -3.87994 | AGCCATCCCCATAAA GGTACTC GCTT GAGCACC AATCGCTTCACCGAG TERM 5968 5862095 - 5862083 - G 73 -4.8 -4.69664 | GATACCAGGCAAAAA CGCT TCGTT AGCG CGATCACGCTTGAGG TERM 5969 5862210 - 5862175 - G 73 -6 -4.42062 | overlap 5862181 TACTGGCTAAAGAAA TAGCAAGGGCGGTGCC ATAA GACCCCGCCCCCAGTA CCGTAATATCGGCAG TERM 5970 5862204 - 5862181 - G 87 -11.6 -3.57662 | overlap 5862175 CTAAAGAAATAGCAA GGGCGGTGCC ATAA GACCCCGCCC CCAGTACCGTAATAT TERM 5971 5862315 - 5862332 + r 90 -8.5 -4.8622 | opp_overlap 5862315 5862314 AGCGACTGAAAAATG CTGAACA GATA TGTTCAG TTTTTAATTAAGCGC Swoo_4875 5862831 - 5862340 - | protein-export protein SecB Swoo_4876 5863375 - 5862941 - | rhodanese domain-containing protein TERM 5972 5863948 - 5863931 - g 81 -9.9 -4.0492 | GAAGCTGTAGATAAA GCCATTG CAAA CAATGGC GCAGTTCATGTGATG Swoo_4877 5863616 - 5865160 + | phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent TERM 5973 5865195 - 5865212 + G 91 -11.3 -4.04209 | opp_overlap 5865195 CGCTTTCTTTCTAAA GCCAGCA TTTT TGCTGGC TTTATCATGCTTTCC TERM 5974 5865212 - 5865195 - g 85 -11.3 -3.53012 | opp_overlap 5865195 CGCTTTCTTTCTAAA GCCAGCA TTTT TGCTGGC TTTATCATGCTTTCC TERM 5975 5865421 - 5865396 - g 72 -3.3 -5.02074 | TCAGCGGCGAAAAAA GTCAACGAGAC TAAA ACCTCATTAAC CCAAACAGATAAGCA Swoo_4878 5865168 - 5866304 + | peptidase M23B TERM 5976 5867214 - 5867228 + G 71 -10 -2.70932 | opp_overlap 5867203 TCAATAAAGGCTCAG CCTCTG CCT CAGAGG TACTTGCAGCAGCGC Swoo_4879 5866337 - 5867542 + | carboxyl-terminal protease Swoo_4880 5867590 - 5868345 + | protein of unknown function DUF610 YibQ Swoo_4881 5868829 - 5868371 - | BadM/Rrf2 family transcriptional regulator Swoo_4882 5869099 - 5868848 - | hypothetical protein TERM 5977 5869157 - 5869144 - H 83 -5.3 -5.4111 | AATAATCAGAAAAAA TACTG ATCT CAGTA TAGCAATATAAAAAT Swoo_4883 5869305 - 5869487 + | hypothetical protein TERM 5978 5869574 - 5869621 + T 100 -13 -4.1891 | gap 1, opp_overlap 5869574 5869581, overlap 5869581 CTTTTTCCTCAAAAC GAAAAAAGCCTCTGCA-TTCTTG TAA TAAGAAGTGCAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5979 5869621 - 5869574 - T 95 -14.5 -3.04398 | gap 1, opp_overlap 5869574 5869581, overlap 5869581 CTTTTTCCTCAAAAC GAAAAAAGCCTCTGCA-TTCTT GTAAT AAGAAGTGCAGAGGCTTTCGTC TTTGTGTTGGCGGAG TERM 5980 5869581 - 5869614 + T 100 -14.1 -4.07089 | gap 1, opp_overlap 5869574 5869581, overlap 5869574 CTCAAAACGAAAAAA GCCTCTGCA-TTCTTG TAA TAAGAAGTGCAGAGGC TTTCGTCTTTGTGTT TERM 5981 5869614 - 5869581 - T 100 -13.4 -5.46698 | gap 1, opp_overlap 5869581 5869574, overlap 5869574 CTCAAAACGAAAAAA GCCTCTGCA-TTCTT GTAAT AAGAAGTGCAGAGGC TTTCGTCTTTGTGTT TERM 5982 5869706 - 5869723 + T 73 -7.1 -4.19746 | CTGAACTACCGCTCC TTTAGAC CGAA GTCTAAA TTCTTTTACCGTCGC TERM 5983 5871249 - 5871260 + T 71 -4.4 -4.7254 | CCTCTTGCGAGTTTG CACA GTAC TGTG TTTTTGATAAACAGT TERM 5984 5871755 - 5871771 + T 75 -8 -4.08546 | overlap 5871744 TTGGTCTTTCGGCGA GGGAGT TTTTC ACTCCC TTTATCGTTACTCAT TERM 5985 5872553 - 5872565 + T 83 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 5986 5873537 - 5873556 + T 71 -9.2 -2.65808 | opp_overlap 5873525 5873528, overlap 5873534 TAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 5987 5874587 - 5874609 + T 72 -9.2 -2.87527 | opp_overlap 5874580 5874592, overlap 5874586 GCGAGTAACGTCACA GCTAACGGTT ATT AACCGTTAAC CTTTCCTCCTCGCTG TERM 5988 5875148 - 5875134 - T 70 -8.6 -3.15999 | opp_overlap 5875134 TGTTTATATAGTGAA TCGAAC TAA GTTCGA TTCTATGAACACTCA TERM 5989 5875134 - 5875148 + T 74 -8.6 -3.48924 | opp_overlap 5875134 TGTTTATATAGTGAA TCGAAC TAA GTTCGA TTCTATGAACACTCA TERM 5990 5875705 - 5875721 + T 72 -7.9 -3.84825 | opp_overlap 5875706, overlap 5875706 CGATACGTACAAAAA AGGGGCT GAA AGCCCCC TTTAATCTCAATAAA TERM 5991 5875706 - 5875720 + T 82 -11.4 -2.90573 | opp_overlap 5875706, overlap 5875705 GATACGTACAAAAAA GGGGCT GAA AGCCCC CTTTAATCTCAATAA TERM 5992 5875720 - 5875706 - T 100 -11.4 -5.29782 | opp_overlap 5875706 5875705 GATACGTACAAAAAA GGGGCT GAA AGCCCC CTTTAATCTCAATAA Swoo_4884 5877198 - 5875756 - | cytochrome c oxidase accessory protein CcoG Swoo_4885 5877288 - 5877641 + | hypothetical protein Swoo_4886 5877756 - 5878661 + | naphthoate synthase Swoo_4887 5878848 - 5879042 + | hypothetical protein TERM 5993 5879037 - 5879018 - T 79 -3.6 -5.45726 | GAGACTTGAAAAAAA CAGTAATA ACAC CATTACCG CATGAGAAAGCGAAC Swoo_4888 5879777 - 5879112 - | YheO domain-containing protein Swoo_4889 5881097 - 5879820 - | hypothetical protein Swoo_4890 5881354 - 5882655 + | serine transporter TERM 5994 5882664 - 5882686 + F 93 -10.6 -5.00616 | opp_overlap 5882668, overlap 5882668 TAGCTAACCTGCTCA TAGACGCCCT TTA GGGGCGTTTA TTTTTTCCAGACAAA TERM 5995 5882668 - 5882682 + F 91 -9.2 -5.04249 | opp_overlap 5882668, overlap 5882664 TAACCTGCTCATAGA CGCCCT TTA GGGGCG TTTATTTTTTCCAGA TERM 5996 5882701 - 5882729 + F 88 -11.1 -4.2349 | opp_overlap 5882706 5882707, overlap 5882706 5882707 ATTTTTTCCAGACAA AAAAATTCCCGCT ATA AGCGGGAGTTTTC TTTTAAATATAGACC TERM 5997 5882706 - 5882724 + F 93 -11 -5.11836 | opp_overlap 5882706 5882707, overlap 5882701 5882707 TTCCAGACAAAAAAA TTCCCGCT ATA AGCGGGAG TTTTCTTTTAAATAT TERM 5998 5882724 - 5882706 - f 100 -8.8 -5.71712 | opp_overlap 5882706 5882701 5882707, overlap 5882707 TTCCAGACAAAAAAA TTCCCGCT ATA AGCGGGAG TTTTCTTTTAAATAT TERM 5999 5882707 - 5882723 + F 90 -12.3 -3.65475 | opp_overlap 5882706 5882707, overlap 5882706 5882701 TCCAGACAAAAAAAT TCCCGCT ATA AGCGGGA GTTTTCTTTTAAATA TERM 6000 5882723 - 5882707 - f 95 -12.3 -4.01943 | opp_overlap 5882707 5882706 5882701, overlap 5882706 TCCAGACAAAAAAAT TCCCGCT ATA AGCGGGA GTTTTCTTTTAAATA Swoo_4891 5882951 - 5884255 + | hypothetical protein TERM 6001 5884321 - 5884297 - T 100 -10 -5.46706 | opp_overlap 5884297 AGTTGAAAACAAAAA TGGCGGCTCC ATAAG GAAACCGCCA TTTAAATCTCACCCA Swoo_4892 5886187 - 5884358 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 6002 5886276 - 5886246 - R 100 -14.8 -2.52795 | opp_overlap 5886245 5886246 5886248 AATTTGCTTAACTTA CATGGCGTGCAAGT ATG ACCCGCACACCATG GTTAGTAATACTTTC Swoo_4893 5887008 - 5886238 - | DeoR family transcriptional regulator TERM 6003 5887142 - 5887122 - R 100 -11.9 -5.64006 | opp_overlap 5887122 ATTTAAGCAAAAAAA GCCCCTATC CAA GATAGAGGC TTATTTATTAAAGAA TERM 6004 5887122 - 5887142 + r 86 -9.7 -4.20367 | opp_overlap 5887122 ATTTAAGCAAAAAAA GCCCCTATC CAA GATAGAGGC TTATTTATTAAAGAA Swoo_4894 5889334 - 5887190 - | TonB-dependent siderophore receptor TERM 6005 5889503 - 5889520 + r 80 -11.3 -3.14132 | opp_overlap 5889503 TTAAAAAACAAAAAA GGCAGCT TATT AGCTGCC TTAATCGGGAAGAGA TERM 6006 5889520 - 5889503 - R 100 -11.3 -6.04324 | opp_overlap 5889503 TTAAAAAACAAAAAA GGCAGCT TATT AGCTGCC TTAATCGGGAAGAGA Swoo_4895 5890905 - 5889541 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 6007 5891359 - 5891332 - g 74 -2.2 -5.18995 | gap 1, opp_overlap 5891332 5891345, overlap 5891335 AAGAGAACAGAAAAA TCATAGTGAAA GGCTCTG TTTCACTA-GA GTTACTATCAAACCT TERM 6008 5891429 - 5891418 - g 70 -3 -5.00616 | TGGCTTCCCAAAAAA TACA ATGT TGTA GATATTGAGGTCGAT TERM 6009 5891632 - 5891619 - g 75 -5.3 -4.84527 | opp_overlap 5891619 CTTACAGAGCAAAAA GCATT TGAT AATGC TTTTATACGTGCAGA Swoo_4896 5891115 - 5892257 + | hypothetical protein TERM 6010 5892288 - 5892259 - T 100 -13.7 -4.82998 | opp_overlap 5892266, overlap 5892266 TCAAATTAAAATAAA CAAAAAAGGCGCC CTAG GGCGCCTTTTTTC ATCAAACAATAACCT TERM 6011 5892266 - 5892281 + T 100 -11.8 -5.14563 | opp_overlap 5892266 5892259 AAAATAAACAAAAAA GGCGCC CTAG GGCGCC TTTTTTCATCAAACA TERM 6012 5892281 - 5892266 - T 100 -11.8 -5.88476 | opp_overlap 5892266, overlap 5892259 AAAATAAACAAAAAA GGCGCC CTAG GGCGCC TTTTTTCATCAAACA Swoo_4897 5892731 - 5892303 - | ATP synthase F1, epsilon subunit Swoo_4898 5894180 - 5892804 - | ATP synthase F1, beta subunit Swoo_4899 5895076 - 5894216 - | ATP synthase F1, gamma subunit Swoo_4900 5896666 - 5895125 - | ATP synthase F1, alpha subunit TERM 6013 5895340 - 5895364 + g 72 -3.6 -4.90266 | gap 1, overlap 5895344 TAGACACAGACTGAT CAGCTACGCTC ATAG GGGCGTA-TTG TTTTTGCTTCATAAG TERM 6014 5895344 - 5895361 + g 82 -7.7 -4.54681 | overlap 5895340 CACAGACTGATCAGC TACGCTC ATAG GGGCGTA TTGTTTTTGCTTCAT TERM 6015 5896722 - 5896706 - R 70 -8.7 -3.05914 | AGCGAATCAGACAGA CGCGAAA CTT TTCCGCG GACCGAGCCATCAAT Swoo_4901 5897214 - 5896681 - | ATP synthase F1, delta subunit TERM 6016 5896961 - 5896932 - G 76 -3.7 -5.08601 | opp_overlap 5896911 TCATCTCAACAAAAA GTTGAGAAACA GCAGGTAG TGTTTCTAAAC GACCGTTTTCAGCCA Swoo_4902 5897701 - 5897231 - | ATP synthase F0, B subunit Swoo_4903 5897990 - 5897739 - | ATP synthase F0, C subunit Swoo_4904 5898850 - 5898056 - | ATP synthase F0, A subunit Swoo_4905 5899246 - 5898863 - | ATP synthase I chain Swoo_4906 5900362 - 5899472 - | parB-like partition protein Swoo_4907 5901169 - 5900378 - | cobyrinic acid ac-diamide synthase TERM 6017 5900514 - 5900482 - G 81 -11.3 -3.2059 | opp_overlap 5900493, overlap 5900480 5900478 ATTTATCATAATACA TTGCCGGAGCACCAA AAC TTGGTGCTTCAGCGA GTCGTACATTCCTTG Swoo_4908 5901880 - 5901260 - | methyltransferase GidB TERM 6018 5901973 - 5901947 - R 78 -11 -2.7169 | overlap 5901946 5901944 5901950 AAGTGCCAGAAACAG TAAGGGAAGC GCTATTG GCTTCCCTTA GAAGTAAATCAGATA TERM 6019 5901970 - 5901950 - R 71 -8.3 -3.50335 | overlap 5901947 5901946 5901944 TGCCAGAAACAGTAA GGGAAGC GCTATTG GCTTCCC TTAGAAGTAAATCAG Swoo_4909 5903884 - 5901992 - | glucose inhibited division protein A TERM 6020 5903217 - 5903227 + g 72 -8.2 -3.98214 | GACATCACAGGTAGA GGCG TAT CGCC TTTCTGCTCGGTCAT Swoo_4910 5904796 - 5904344 - | flavodoxin/nitric oxide synthase Swoo_4911 5905798 - 5904986 - | ubiquinone biosynthesis O-methyltransferase Swoo_4912 5906601 - 5905960 - | lysine exporter protein LysE/YggA TERM 6021 5908743 - 5908761 + G 70 -9 -3.22774 | opp_overlap 5908746, overlap 5908746 TGGGGCCAAGCGAGT GAAGTATT ACC AATACTTC TTCCTGCTGGCTATC Swoo_4913 5907568 - 5908932 + | amino acid carrier protein TERM 6022 5908943 - 5908963 + F 70 -6.9 -3.77489 | overlap 5908937 5908935 5908961 GGTAATTTAGCTTTA GCGATGA AGCTATA TCATCGC TTTGAGTGTTCCATT TERM 6023 5909681 - 5909702 + G 73 -10.1 -2.98479 | opp_overlap 5909680 5909679 TAGATTCCATCAATG TGGTGGAGC GGGC GCACCACCA TGTACTCTTTAATCG Swoo_4914 5909551 - 5910729 + | hypothetical protein TERM 6024 5910727 - 5910746 + T 73 -9.4 -2.94827 | overlap 5910720 5910729 5910736 ATTAACAAGGGGAGG TAGCTTCA ACGA TGAAGCTA TATCATCGTTTTTAT TERM 6025 5910736 - 5910754 + T 79 -4.6 -5.19328 | overlap 5910729 5910727 5910720 GGGAGGTAGCTTCAA CGATGA AGCTATA TCATCG TTTTTATTATCACAT TERM 6026 5911479 - 5911463 - T 70 -5.1 -4.58085 | overlap 5911464 AGACTCATAAACAAA CCAGCAA TGG TTGCTGC CATCAAGTTCGACAA TERM 6027 5911478 - 5911464 - T 72 -8.6 -3.33766 | overlap 5911463 GACTCATAAACAAAC CAGCAA TGG TTGCTG CCATCAAGTTCGACA Swoo_4915 5912709 - 5911441 - | nucleoside transporter TERM 6028 5912557 - 5912547 - G 76 -8.2 -4.23999 | CCATATTTAAAATAA CGGC TTG GCCG AATGATGAATAGATG TERM 6029 5912676 - 5912660 - G 71 -4.4 -4.70169 | gap 1 TCAGACGCAAGAAAA GCCACTG AAAG CAG-GGC GATGATGCCAACAAT TERM 6030 5912820 - 5912842 + r 100 -16.4 -3.35371 | GCAAGCGTCAGCGGG CGGGAATACC AAA GGTATTCCCG TTACTTAAGGCTCTG Swoo_4916 5913728 - 5912889 - | purine phosphorylase family 1 TERM 6031 5914296 - 5914309 + r 72 -5.3 -4.67234 | opp_overlap 5914296 CTTGTTGGTTAACAA GTTAC GCAA GTAAC TTTTTAAAGTTAGGT TERM 6032 5914530 - 5914549 + r 86 -9.4 -4.51196 | overlap 5914539 5914540 TGCAGCAGGGTTGAT TAGCTTCA ACGA TGAAGCTA TTTTATCGCTTTAAC Swoo_4917 5917217 - 5914875 - | hypothetical protein TERM 6033 5915549 - 5915562 + g 71 -4.5 -4.59591 | CTATTTGTTCTATTG CCTCT TGGT AGGGG TTTTCATCTTTTATT TERM 6034 5916262 - 5916293 + g 75 -4.6 -5.02287 | gap 1 AAGCTTTTTTGCCAA GTTTGCAGCT-GTTT AAT AAACGAGTTGGAAAC TTTTGTGTTTTTCTC Swoo_4918 5919511 - 5917244 - | hypothetical protein TERM 6035 5917727 - 5917737 + g 100 -3.2 -5.95166 | GACAGGGTAACTTAA TGGC TTG GCTA TTTTTTTTGATTCAA Swoo_4919 5920774 - 5919524 - | DNA-cytosine methyltransferase TERM 6036 5921414 - 5921451 + G 82 -4.9 -5.28176 | opp_overlap 5921421 5921427, overlap 5921415 5921416 5921418 ATTTGTATGATCTTT TAGAGTATCTAAACCTA GATT TAGGTTTAGAGTCTCGG TTTTTTATCGATGAG TERM 6037 5921416 - 5921449 + G 70 -9.7 -2.84986 | opp_overlap 5921421 5921427, overlap 5921415 5921414 5921418 TTGTATGATCTTTTA GAGTATCTAAACCTA GATT TAGGTTTAGAGTCTC GGTTTTTTATCGATG TERM 6038 5921444 - 5921421 - g 77 -11.2 -2.62616 | opp_overlap 5921418 5921416 5921415 5921414, overlap 5921427 TGATCTTTTAGAGTA TCTAAACCTA GATT TAGGTTTAGA GTCTCGGTTTTTTAT Swoo_4920 5921125 - 5921685 + | hypothetical protein TERM 6039 5922052 - 5922062 + G 72 -5.4 -4.56597 | opp_overlap 5922052 TTATCATAATGAAAG CAGT ATC ACTG TTTTTGAAGCCGAAG Swoo_4921 5921750 - 5922142 + | hypothetical protein TERM 6040 5922773 - 5922755 - f 75 -4.6 -5.05505 | overlap 5922763 5922765 ATGAGAAAGTAAAAA CGATGA TATAGCT TCATCG CTGAAGCTAACAAGG TERM 6041 5922782 - 5922763 - f 73 -9.4 -2.94225 | overlap 5922755 5922765 GTAAAAACGATGATA TAGCTTCA TCGC TGAAGCTA ACAAGGTTTGATTAC Swoo_4922 5922956 - 5923387 + | hypothetical protein Swoo_4923 5923440 - 5924432 + | catalase domain-containing protein TERM 6042 5924439 - 5924471 + T 100 -14.3 -3.2827 | opp_overlap 5924440 5924441 5924458, overlap 5924440 5924453 5924458 CGCCAATAGTCAAAA ATCTATTCGCCTCAT ATT ATGAGGCGAATAGGA TTCCTAATTGCCTCA TERM 6043 5924440 - 5924470 + T 100 -17.8 -2.5664 | opp_overlap 5924440 5924441 5924458, overlap 5924439 5924453 5924458 GCCAATAGTCAAAAA TCTATTCGCCTCAT ATT ATGAGGCGAATAGG ATTCCTAATTGCCTC TERM 6044 5924470 - 5924440 - T 100 -15.6 -4.74706 | opp_overlap 5924440 5924439 5924453 5924458, overlap 5924441 5924458 GCCAATAGTCAAAAA TCTATTCGCCTCAT ATT ATGAGGCGAATAGG ATTCCTAATTGCCTC TERM 6045 5924469 - 5924441 - T 100 -19.1 -3.441 | opp_overlap 5924440 5924439 5924453 5924458, overlap 5924440 5924458 CCAATAGTCAAAAAT CTATTCGCCTCAT ATT ATGAGGCGAATAG GATTCCTAATTGCCT TERM 6046 5924458 - 5924486 + T 95 -12.5 -3.25666 | opp_overlap 5924441 5924440 5924458, overlap 5924440 5924439 5924453 ATTCGCCTCATATTA TGAGGCGAATAGG ATT CCTAATTGCCTCA TTACCTCTATTTTTC TERM 6047 5924486 - 5924458 - T 76 -10.3 -2.62263 | opp_overlap 5924440 5924439 5924458 5924453, overlap 5924441 5924440 ATTCGCCTCATATTA TGAGGCGAATAGG ATT CCTAATTGCCTCA TTACCTCTATTTTTC TERM 6048 5925362 - 5925343 - T 79 -9.4 -3.82097 | overlap 5925328 5925335 5925334 GTTAAAGCGATGAAA TAGCTTCA TCGT TGAAGCTA ACAAACTTCAAAGTA TERM 6049 5925423 - 5925452 + T 74 -10.1 -2.70932 | opp_overlap 5925421 ACCAGAAAAGCTATT TGCGTTACTTGCT AGCT AGCAAGTAACGGG TACTTCGCCCACCAG Swoo_4924 5926536 - 5925427 - | filamentation induced by cAMP protein Fic TERM 6050 5926627 - 5926597 - H 100 -13.4 -4.05004 | opp_overlap 5926582 5926608 5926609, overlap 5926582 TGAGTAGAATAACAA CTTATTCGCCTCAC TTT ATGAGGCGAATAGG GATCCTAATTGCCTC Swoo_4925 5926802 - 5927029 + | hypothetical protein Swoo_4926 5927344 - 5928099 + | hypothetical protein TERM 6051 5928463 - 5928473 + G 71 -4.6 -4.731 | CGGGTGGCTTGTTTG GCGC TAA GTGC TTTTGTTAGTGCCTT TERM 6052 5928959 - 5928976 + G 74 -3.4 -5.15167 | opp_overlap 5928959 GGCTTTTATCTGAAA CCAGAG GAGATA TTCTGG TTTTTCTTCCTGGTA TERM 6053 5930056 - 5930066 + G 70 -6.8 -4.02719 | CAGGGTCGAGAGAGC GCTG TTG CAGC TTTGGTGTTTGATCA Swoo_4927 5928232 - 5930748 + | helicase domain-containing protein TERM 6054 5931233 - 5931257 + T 70 -5.8 -4.35405 | opp_overlap 5931228 5931233, overlap 5931228 5931251 AGTATATAGATGGAA TTTTATCCAC TGTTT GGGGATAAAA TTTATCATTTTTTTA TERM 6055 5931456 - 5931483 + T 88 -9.2 -4.68846 | gap 1 TACGTTGGGGAGGAT GAG-GCCACCTGA GAA TCAGATGGCACTC TTTTGCTTTGTTACT Swoo_4928 5932855 - 5931494 - | tRNA modification GTPase TrmE TERM 6056 5932915 - 5932889 - R 71 -3.1 -5.1287 | TGGATAGTGAAAAAA TGAAAGATAAA AAAAG TATATCTCTCA TAAAAAGCAAAAAGC TERM 6057 5932953 - 5932929 - R 100 -11.5 -5.2197 | opp_overlap 5932929 CATAAAAAGCAAAAA GCGGCCAATAC CAA GTATTAACCGC TTTTTCTTAGTTGGA TERM 6058 5932929 - 5932953 + r 91 -7.1 -5.1963 | opp_overlap 5932929 CATAAAAAGCAAAAA GCGGCCAATAC CAA GTATTAACCGC TTTTTCTTAGTTGGA TERM 6059 5932988 - 5932974 - R 70 -8.6 -3.06183 | opp_overlap 5932974 CTTAGTTGGAGTTAA GGGTTA TTT TAACCC TTTTTTCTCCAAACC TERM 6060 5932974 - 5932988 + r 100 -8.6 -5.24129 | opp_overlap 5932974 CTTAGTTGGAGTTAA GGGTTA TTT TAACCC TTTTTTCTCCAAACC Swoo_4929 5934611 - 5932977 - | 60 kDa inner membrane insertion protein Swoo_4930 5934872 - 5934615 - | hypothetical protein Swoo_4931 5935198 - 5934839 - | ribonuclease P protein component TERM 6061 5935179 - 5935145 - GR 100 -13 -3.76607 | GAATACAGATTTAAA TTGCGCGGGAGTTA ACAAACG TAACTCCCGCGTAA AGGTGTAGCTAATAG Swoo_4932 5935354 - 5935217 - | ribosomal protein L34