TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.475347 %AT, 3621265 nt, 31936 terms. Intergenic: 0.536795 %AT, H2T: 698675 nt, 5711 terms; T2T: 244875 nt, 4668 terms; H2H: 255357 nt, 3851 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|82524664|ref|NC_007608.1| Shigella boydii Sb227 plasmid pSB4_227, complete sequence (length 126697) SBO_P002 493 - 191 - | IS2 ORF2 SBO_P001 485 - 727 + | putative resolvase, fragment SBO_P003 1709 - 804 - | insertion element IS2 transposase InsD SBO_P004 2032 - 1667 - | insertion sequence 2 OrfA protein TERM 1 2264 - 2248 - H 74 -11.5 -2.79183 | opp_overlap 2248 TGCACTGGTATCAGA CCCGGGG CTT CCCCGGA TGATCTCCACGGTAC TERM 2 2910 - 2884 - g 72 -5.3 -4.57275 | opp_overlap 2890, overlap 2890 TAAAAAAAGCGAAAA TAAAAACAGTA AACGA TACTGATTTTA AAGAGTATAATAAGG TERM 3 2904 - 2890 - g 100 -4.3 -5.49568 | opp_overlap 2890, overlap 2884 AAGCGAAAATAAAAA CAGTA AACGA TACTG ATTTTAAAGAGTATA ospB 2511 - 3377 + | OspB TERM 4 3537 - 3566 + F 84 -10.3 -3.92143 | opp_overlap 3539 3562 ATCATTCTTTTACTA CATTATTTTTCGT GAAT ATGAAAAATAATG TTATTACTTTAATAT phoN2/apy 3707 - 4447 + | PhoN2 (Apy) SBO_P007 4699 - 4863 + | hypothetical protein insB 5489 - 4986 - | IS1 ORF2 SBO_P010 7039 - 6134 - | insertion element IS2 transposase InsD SBO_P011 7362 - 6997 - | insertion sequence 2 OrfA protein SBO_P012 8256 - 7855 - | putative IS orf, fragment SBO_P013 8758 - 8336 - | IS600 ORF2 SBO_P014 9096 - 8794 - | IS600 ORF1 SBO_P015 9387 - 9704 + | hypothetical protein ospD2 11495 - 9786 - | OspD2 TERM 5 10080 - 10098 + g 84 -3.8 -5.28778 | AAATGCCATAAAAAG TCCTGATG TAC CGTTGGGA TTTTTTATCCATAAT TERM 6 11570 - 11553 - R 72 -5.5 -4.44797 | opp_overlap 11554, overlap 11554 TTACTAATAGTAAAA GCCTCCT TACA AGGAGGT AGCTTATTCAGAATG ospF 12646 - 11927 - | OspF SBO_P018 13355 - 12771 - | hypothetical protein SBO_P019 14263 - 13685 - | hypothetical protein SBO_P020 15585 - 15229 - | IS91 orf SBO_P021 15770 - 15585 - | putative IS91 ORF2 SBO_P022 15933 - 16217 + | putative transposase TERM 7 16210 - 16200 - T 76 -2.4 -5.40072 | CCGGTGGTAAAAAAA CGTC CCC GGCG GCCTTAATGCCAGTC TERM 8 16217 - 16246 + T 89 -9.3 -4.59109 | overlap 16219 TCCCCGGCGGCCTTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 9 16219 - 16244 + T 100 -16.3 -3.90762 | overlap 16217 CCCGGCGGCCTTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_P023 17400 - 16228 - | IS4 orf TERM 10 17563 - 17588 + H 72 -9.1 -3.61398 | opp_overlap 17563 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 11 17588 - 17563 - H 100 -9.8 -5.61596 | opp_overlap 17563 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 12 17878 - 17860 - g 71 -3.1 -4.77567 | gap 1, overlap 17861 17862 AGCCGGATAATAAAA TCCCG-GC TCCG GCACAGGA ACCAGAGCAGATAAA SBO_P024 17712 - 18017 + | putative IS orf, fragment SBO_P025 18017 - 18364 + | ISSfl4 ORF2 TERM 13 18425 - 18410 - g 72 -10.4 -3.40522 | opp_overlap 18409 ACTTGCTCATGAGAA TGCCCG CCTG CGGGCA CTGTTGCAGACGCAA SBO_P026 18384 - 18566 + | putative IS orf, fragment SBO_P028 18645 - 19028 + | putative protein encoded within IS SBO_P029 19041 - 19616 + | putative IS orf, fragment SBO_P030 20385 - 20591 + | putative transposase, fragment ospD1 21177 - 21854 + | OspD1 SBO_P032 22560 - 22354 - | hypothetical protein TERM 14 22733 - 22764 + H 76 -8.2 -4.14472 | gap 1, opp_overlap 22732 22736 22738 22739, overlap 22737 22738 22759 CTTCATAACTACAAC TAACAGGGCATCATT ATG AATGATGCCG-GTTA TTTTACCGCTGTTGG TERM 15 22760 - 22738 - H 70 -9.2 -3.31854 | opp_overlap 22738 22737 22733 22759, overlap 22736 22732 22739 TAACTACAACTAACA GGGCATCATT ATG AATGATGCCG GTTATTTTACCGCTG TERM 16 22759 - 22739 - H 78 -12.7 -2.58389 | opp_overlap 22738 22737 22733, overlap 22738 22736 22732 AACTACAACTAACAG GGCATCATT ATG AATGATGCC GGTTATTTTACCGCT ipgB2 22962 - 23528 + | IpgB2 SBO_P034 24082 - 24609 + | IS3 ORF2 insB 25366 - 24863 - | IS1 ORF2 TERM 17 26150 - 26170 + H 100 -15.5 -3.46848 | overlap 26140 TCCAGGGGGTAATCT GCTCTCCTG ATT CAGGAGAGC TTATGGTCACTTTTG TERM 18 26222 - 26207 - g 70 -4.6 -4.56914 | overlap 26208 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC SBO_P036 26173 - 26943 + | IS100 ORF1 SBO_P037 26921 - 27109 + | IS100 ORF1 SBO_P038 27135 - 27461 + | IS629 ORF1 TERM 19 27777 - 27765 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_P039 27733 - 28344 + | IS629 ORF2 TERM 20 28412 - 28398 - g 80 -11.4 -3.3506 | overlap 28389 TTCAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG SBO_P040 28328 - 29110 + | transposase/IS protein SBO_P041 29171 - 29515 + | iso-IS1 ORF2 SBO_P042 29493 - 29699 + | putative protein encoded within IS TERM 21 29781 - 29792 + F 100 -5.8 -5.9873 | overlap 29772 CTTGCATGCATTACC CTGC TAAT GCAG TTTTTTTTGTAATAA TERM 22 30539 - 30524 - g 81 -6.1 -4.80453 | TTAGGACAAAACAAA CACGC GATATT GCGTG AGAATATTATTGATA parA 29837 - 31036 + | plasmid segregation protein parB 31036 - 32016 + | plasmid segregation protein SBO_P045 32272 - 32757 + | putative transposase, fragment SBO_P046 34091 - 33045 - | putative reverse transcriptase TERM 23 33438 - 33463 + g 70 -6.9 -4.13014 | gap 1, opp_overlap 33438 GTCATATCCGAGAAA GGTGAAAC-TCG TTG CGACGTTTCTCC TTTTAAACGTGTCAA TERM 24 34012 - 34032 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SBO_P047 34420 - 34118 - | IS911 ORF1 TERM 25 35010 - 35025 + H 73 -10.4 -3.01003 | opp_overlap 35010, overlap 35000 GTCCACAGAGGTAAA TGCCGC TGAC GCGGCA TCTGTAATCTGTTAC TERM 26 35025 - 35010 - H 83 -10.4 -3.74077 | opp_overlap 35010 35000 GTCCACAGAGGTAAA TGCCGC TGAC GCGGCA TCTGTAATCTGTTAC SBO_P048 35093 - 35377 + | hypothetical protein SBO_P049 35365 - 35850 + | hypothetical protein TERM 27 35854 - 35839 - f 72 -9 -3.53563 | ACATTGTTTCTTAAA CTCCCT CAAT AGGGAG TAATGCACTGGTCTG TERM 28 36447 - 36436 - g 77 -5.8 -4.63218 | opp_overlap 36441 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_P050 35935 - 36855 + | IS911 ORF2 SBO_P051 38040 - 36913 - | putative transposase TERM 29 37095 - 37115 + g 100 -5.3 -5.47159 | overlap 37075 37072 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG TERM 30 38876 - 38852 - g 100 -2.7 -5.95539 | opp_overlap 38854 38856, overlap 38854 38855 GGTTAAACAAAAAAA TATTCCTCCTC TCT GAGGAGGAGGT TTCTATCGATTTGTT TERM 31 38874 - 38854 - g 95 -9.7 -4.61687 | opp_overlap 38854 38856, overlap 38852 38855 TTAAACAAAAAAATA TTCCTCCTC TCT GAGGAGGAG GTTTCTATCGATTTG TERM 32 38854 - 38874 + G 75 -11.9 -3.06054 | opp_overlap 38854 38852 38855, overlap 38856 TTAAACAAAAAAATA TTCCTCCTC TCT GAGGAGGAG GTTTCTATCGATTTG TERM 33 38873 - 38855 - g 89 -13.2 -3.34572 | opp_overlap 38854 38856, overlap 38854 38852 TAAACAAAAAAATAT TCCTCCTC TCT GAGGAGGA GGTTTCTATCGATTT TERM 34 38856 - 38875 + G 83 -10 -4.11897 | opp_overlap 38855 38854 38852, overlap 38854 AAACAAAAAAATATT CCTCCTCT CTGA GGAGGAGG TTTCTATCGATTTGT virF 38539 - 39327 + | VirF TERM 35 39625 - 39639 + F 82 -11.4 -3.54475 | CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATGTACTGCACCC SBO_P053 39887 - 40096 + | IS150 ORF1 SBO_P054 40986 - 40099 - | IS629 ORF2 TERM 36 40666 - 40678 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_P055 41312 - 40986 - | IS629 ORF1 SBO_P056 41459 - 41797 + | IS911 ORF1 TERM 37 41903 - 41883 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 38 42255 - 42244 - g 77 -5.8 -4.63218 | opp_overlap 42249 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_P057 41824 - 42663 + | IS911 ORF2 TERM 39 42921 - 42904 - g 73 -9.1 -3.57561 | overlap 42914 42915 GCTGAACTGGCTAAA GGCCTCA AAAC CGAGGCC GACCTCAATCAGTTT SBO_P058 42859 - 43026 + | hypothetical protein ipaH1.4 44771 - 43044 - | invasion plasmid antigen TERM 40 44803 - 44783 - R 72 -5.5 -4.51174 | opp_overlap 44784, overlap 44777 44784 TCATTATAACTAAAA TTTCTTATC AGC GATAAGAAT TCTAGTGAAATAGAA TERM 41 44784 - 44802 + r 70 -9 -3.41602 | opp_overlap 44783 44777 44784 CATTATAACTAAAAT TTCTTATC AGC GATAAGAA TTCTAGTGAAATAGA TERM 42 44802 - 44784 - R 70 -9 -3.29981 | opp_overlap 44784, overlap 44783 44777 CATTATAACTAAAAT TTCTTATC AGC GATAAGAA TTCTAGTGAAATAGA TERM 43 45457 - 45467 + r 82 -2.6 -5.55698 | overlap 45456 TATGTTATATTTCGG TAAA AAA TTTA TTTTTTTACATTATA SBO_P060 45772 - 45488 - | putative IS orf, fragment insB 46618 - 46115 - | IS1 ORF2 SBO_P062 47047 - 47349 + | IS600 ORF1 SBO_P063 47385 - 47573 + | IS600 ORF2 SBO_P064 48224 - 47613 - | IS629 ORF2 TERM 44 48180 - 48192 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_P065 48822 - 48496 - | IS629 ORF1 ipaH4.5 50598 - 48874 - | invasion plasmid antigen ipaH7.8 52723 - 51026 - | invasion plasmid antigen TERM 45 52080 - 52068 - G 70 -4.1 -4.62471 | opp_overlap 52068 TCTAATTGTGAAAAA CTCTC CGG AAGAG TGGTTATCTGATTAA TERM 46 52595 - 52613 + g 76 -7.4 -4.21933 | overlap 52603 AAAAGCAATGCCTCG CTCTTCCC CGG GAGAAGAG TTCTTTTCCCATTCA SBO_P068 53541 - 53359 - | iso-IS1 ORF2 SBO_P069 55164 - 54133 - | IS630 orf TERM 47 54179 - 54198 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 54191 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG SBO_P070 55668 - 55279 - | ISSfl1 ORF2 TERM 48 55690 - 55709 + r 79 -8.6 -4.25104 | opp_overlap 55678, overlap 55678 TAACGGGAGGCCACT TCCGTCTG TTGC CAGATGGA TTTTGGTGCCAAAAC SBO_P071 55898 - 55674 - | ISSfl1 ORF1 SBO_P072 56123 - 55911 - | ISSfl1 ORF1 SBO_P073 56566 - 56300 - | IS1294 transposase TERM 49 56593 - 56622 + r 89 -9.3 -4.59109 | overlap 56595 TCTCCGGGATGTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 50 56595 - 56620 + r 100 -16.3 -3.90762 | overlap 56593 TCCGGGATGTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_P074 57950 - 56604 - | IS4 orf TERM 51 57965 - 57940 - G 100 -9.8 -5.61596 | opp_overlap 57940 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 52 57940 - 57965 + g 73 -9.1 -3.61398 | opp_overlap 57940 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC SBO_P075 58946 - 58014 - | IS1294 transposase TERM 53 58054 - 58066 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 54 58150 - 58164 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 55 58685 - 58695 + g 79 -4.6 -5.00616 | overlap 58680 58679 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC ospD3 61299 - 59602 - | OspD3 ospC1 63039 - 61627 - | OspC1 TERM 56 62560 - 62570 + g 70 -4 -4.68384 | TTTTGTGCATATTCC TTCA GAC TGAA TTTTATTGAATGACT SBO_P078 63794 - 63495 - | hypothetical protein SBO_P079 64200 - 64373 + | IS1294 transposase tieB 65885 - 64746 - | TieB TERM 57 65255 - 65269 + gF 77 -2.8 -5.1675 | overlap 65231 AATCTCTTCCGCCAA CGTAGA TTT TCTGTG TTTTTTCATCCATCG TERM 58 65721 - 65739 + gF 71 -3 -4.74801 | opp_overlap 65736 ACGATTTACACGATC GGTGACTG CTG CAAACACC TTTTTACTGGCATTA TERM 59 65909 - 65920 + Gr 74 -3 -4.90266 | opp_overlap 65909 GTGCTTTGGATAAAG TGAA AATA TTCA TTTTTCGTTCCTGCA cjrC 68251 - 65990 - | colicin Js sensitive receptor protein SBO_P080 65860 - 66081 + | hypothetical protein cjrB 69196 - 68420 - | TonB-like colicin Js sensitive putative membrane protein cjrA 70055 - 69204 - | putative iron-regulated protein TERM 60 69520 - 69536 + g 93 -2.1 -5.72207 | overlap 69516 69521 CGCAGAGCTTCTTGT ACCACAG GTG CAGTGGA TTTTTTTCCTTTAGG TERM 61 70438 - 70424 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 62 70534 - 70522 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG SBO_P085 70356 - 70574 + | IS1294 transposase TERM 63 70648 - 70623 - f 72 -9.1 -3.61398 | opp_overlap 70623 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 64 70623 - 70648 + F 100 -9.8 -5.61596 | opp_overlap 70623 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SBO_P086 70638 - 71984 + | IS4 orf TERM 65 71995 - 71966 - f 89 -9.3 -4.59109 | overlap 71968 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACATCCCGGAGA TERM 66 71993 - 71968 - f 100 -16.3 -3.90762 | overlap 71966 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACATCCCGGA SBO_P087 72022 - 72288 + | IS1294 transposase SBO_P089 73064 - 72669 - | hypothetical protein TERM 67 73190 - 73204 + GH 70 -10 -2.95111 | opp_overlap 73190 73188, overlap 73189 TTTTGACGAAGAAGA CGCAGA AGT TCTGCG CTTTGATAGTTTTGA TERM 68 73204 - 73190 - gH 74 -10 -3.44284 | opp_overlap 73189 73190, overlap 73188 TTTTGACGAAGAAGA CGCAGA AGT TCTGCG CTTTGATAGTTTTGA SBO_P088 73026 - 73448 + | putative IS91 ORF2 TERM 69 73860 - 73845 - g 73 -9 -3.63805 | ATGTGATACTGGAAA TCTGCC ATCA GGCAGA TGTGGAGCCGAGGAT SBO_P090 73562 - 74635 + | IS91 orf SBO_P091 75459 - 75172 - | putative bacteriophage protein SBO_P092 75770 - 75459 - | putative bacteriophage protein TERM 70 76398 - 76373 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 76381, overlap 76374 76388 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 71 77378 - 77406 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SBO_P093 76235 - 77431 + | ISSfl2 ORF insB 77858 - 78361 + | IS1 ORF2 ospE2 78845 - 78579 - | OspE2 TERM 72 78871 - 78881 + r 75 -2.6 -5.1925 | overlap 78870 TATGTTATATTTTAG TAAA GAA TTTA TTTTTTACATTATAG SBO_P095 79314 - 79027 - | IS2 ORF2 SBO_P096 80875 - 79748 - | putative transposase TERM 73 79930 - 79950 + g 100 -5.3 -5.47159 | overlap 79910 79907 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG SBO_P097 80939 - 81181 + | hypothetical protein TERM 74 81337 - 81366 + T 74 -5.7 -4.72986 | opp_overlap 81310 GCGTACTGCTGTTAG GGTGGGGGTGA CCATCTCA TTATCCCCGCC TTTTTCCTGCCGGTC TERM 75 81419 - 81451 + T 71 -6.9 -4.18401 | overlap 81426 CGCCGCCGGCTCCGC TTTACCCGGCCATGC GGG GCATGGCCTTGTGGG TTTTCAGCTCTGTAG TERM 76 81426 - 81444 + T 95 -14.6 -3.52113 | overlap 81419 GGCTCCGCTTTACCC GGCCATGC GGG GCATGGCC TTGTGGGTTTTCAGC SBO_P098 82441 - 81536 - | insertion element IS2 transposase InsD SBO_P099 82764 - 82399 - | insertion sequence 2 OrfA protein SBO_P100 83181 - 82963 - | putative IS orf, fragment SBO_P101 83874 - 83236 - | hypothetical protein TERM 77 83472 - 83488 + g 75 -6.6 -4.43221 | opp_overlap 83474 TAGAAATCATTACTA CACTTC CTTTT GAAGTG TTTTGTAAAATATTT SBO_P102 84072 - 84398 + | IS629 ORF1 TERM 78 84714 - 84702 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_P103 84670 - 85281 + | IS629 ORF2 TERM 79 87012 - 86999 - g 70 -5.3 -4.32649 | opp_overlap 86999 ATTTCAAAAAGCAAA TAGTG GGGA CACTA TGCTTGACAATGCAA ospC3 85650 - 87104 + | OspC3 SBO_P105 87442 - 87744 + | IS600 ORF1 SBO_P106 87885 - 88598 + | IS600 ORF2 SBO_P107 89885 - 88998 - | IS629 ORF2 TERM 80 89565 - 89577 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_P108 90211 - 89885 - | IS629 ORF1 TERM 81 90505 - 90494 - g 77 -5.8 -4.63218 | opp_overlap 90499 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_P109 90287 - 90913 + | IS911 ORF2 SBO_P110 91079 - 91426 + | hypothetical protein ccdA 91598 - 91816 + | plasmid maintenance protein CcdA TERM 82 92072 - 92055 - g 85 -11.3 -3.62597 | GTTATCGGGGAAGAA GTGGCTG ATCT CAGCCAC CGCGAAAATGACATC ccdB 91797 - 92123 + | plasmid maintenance protein CcdB TERM 83 92644 - 92624 - g 72 -5.3 -4.45259 | overlap 92625 AAATGGGAAAAACAA GCGCTCCCC GGT GAAGAGCGT GATGAGGCTGTCTCC ipaH9.8 92516 - 94153 + | invasion plasmid antigen TERM 84 94280 - 94295 + F 72 -10.4 -2.82635 | GAGTGCCGCCTTACA TGCCGC TGGC GCGGCA TATCCTGGTGACGAT SBO_P114 94361 - 94630 + | hypothetical protein TERM 85 94816 - 94830 + T 70 -5 -4.53303 | CTGGACCACACAAGG TAGCGT GTA ACGTTA TTTTGTGTGAAAATC insB 95366 - 94863 - | IS1 ORF2 SBO_P116 96247 - 97089 + | hypothetical protein SBO_P117 97092 - 98180 + | hypothetical protein TERM 86 98219 - 98230 + G 72 -4.4 -4.67552 | TATCATTTATCGGTT TCCT TAAA AGGA TTGTTTTTTCCTCAG TERM 87 98765 - 98791 + G 72 -5.8 -4.40963 | overlap 98766 GGTGCGCAACCCGGG CCTGTTATGGGA TTT TCCCAAAACGGA TTATTTTTGAAGCAT virK 98185 - 99135 + | VirK TERM 88 99397 - 99377 - g 88 -5.3 -5.17353 | opp_overlap 99379 99393, overlap 99378 99379 AGATTGAGCAAAAAA GCTCGTCGC AGG GCGACGATT AATTTATCGCTTTGT TERM 89 99379 - 99395 + G 88 -12.3 -3.63662 | opp_overlap 99378 99377 99379, overlap 99393 ATTGAGCAAAAAAGC TCGTCGC AGG GCGACGA TTAATTTATCGCTTT TERM 90 99395 - 99379 - g 77 -12.3 -2.80873 | opp_overlap 99379 99393, overlap 99378 99377 ATTGAGCAAAAAAGC TCGTCGC AGG GCGACGA TTAATTTATCGCTTT msbB2 99200 - 100144 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase SBO_P120 100906 - 100298 - | IS630 orf TERM 91 100344 - 100363 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 100356 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG insB 101488 - 100985 - | IS1 ORF2 TERM 92 101742 - 101770 + H 71 -7.3 -4.16842 | opp_overlap 101741 101743 101746, overlap 101743 GCAGCATTACCAAAT ATCAGGAACGACC GAA GGTCGCTCCGGAG TTTATTCCGCGTGAC TERM 93 101743 - 101769 + H 73 -10.8 -3.09784 | opp_overlap 101741 101743 101746, overlap 101742 CAGCATTACCAAATA TCAGGAACGACC GAA GGTCGCTCCGGA GTTTATTCCGCGTGA TERM 94 101769 - 101743 - H 90 -13 -3.48738 | opp_overlap 101743 101742, overlap 101741 101746 CAGCATTACCAAATA TCAGGAACGACC GAA GGTCGCTCCGGA GTTTATTCCGCGTGA TERM 95 101766 - 101746 - H 82 -13.3 -2.88215 | opp_overlap 101743 101742, overlap 101743 101741 CATTACCAAATATCA GGAACGACC GAA GGTCGCTCC GGAGTTTATTCCGCG traD 101798 - 102211 + | membrane protein, fragment TERM 96 102330 - 102360 + GT 82 -11 -3.55842 | opp_overlap 102331, overlap 102331 CGATCATTTGATCAA ATGGCCCGACAGGG CGT CCCTGACGGGCAAG TTCTGCTCTTATCTG TERM 97 102359 - 102331 - gT 100 -14.5 -3.75169 | opp_overlap 102330 102331 GATCATTTGATCAAA TGGCCCGACAGGG CGT CCCTGACGGGCAA GTTCTGCTCTTATCT TERM 98 102331 - 102359 + GT 90 -14.5 -2.72782 | opp_overlap 102331, overlap 102330 GATCATTTGATCAAA TGGCCCGACAGGG CGT CCCTGACGGGCAA GTTCTGCTCTTATCT mvpT 102845 - 102618 - | plasmid maintenance protein trbH 102211 - 102930 + | hypothetical protein SBO_P125 102927 - 103346 + | oriT nicking and unwinding protein, fragment TERM 99 104482 - 104470 - gf 70 -4.1 -4.60487 | overlap 104471 GACCAGGGCGAAAAA CTCTC CCT GAAAG AGACGTTAACCCTGC TERM 100 104835 - 104794 - gf 72 -8.5 -3.67188 | overlap 104792 104822 AGTGAGCTGAAAACA CAGGGCGTGCTCGGACACC CGGA GGTAACCATGACCGCCCTG TCACCGGTCTGGCTG TERM 101 105072 - 105062 - gf 86 -6.8 -5.00616 | TCCGGCCGGAAAAAA TGCC GGT GGCA GACGGTGAGCGTCTG TERM 102 105275 - 105295 + GF 75 -5.4 -4.67353 | gap 1 AAACGCCCGGGCATT CCGTCAGCG ACAG TGC-GACGG TTTTTGCCTCCGTCA TERM 103 105865 - 105847 - gf 71 -10.2 -2.69246 | opp_overlap 105853, overlap 105842 105852 GAGAAACTGACATCA GGACAGCG CGC CGCCGCCC GTATGATACTGGAAA TERM 104 108148 - 108123 - gf 74 -7.6 -4.07687 | AGTTGCCCGGGAAAA TTTGCTGCAG GAGCGT CTGCAGCAGA TGGAGCGGGATATGG SBO_P126 103306 - 108204 + | oriT nicking and unwinding protein, fragment TERM 105 108199 - 108188 - f 71 -3.6 -4.84918 | TGCAGAAAGAGAAAA CCCC GGGC GGAG ACTGATACAGGAAGA TERM 106 108658 - 108672 + G 76 -9.2 -3.85698 | opp_overlap 108641 GGCCATACTCCTGAT GGCCCT GTG GGGGCC TTTGTCCGGCACCAG TERM 107 108897 - 108913 + G 72 -5.1 -4.58283 | GAAAATCATTACCCC GTTTCTG GCC CGGAGAC TTTTTCCCGACGTTC traX 108224 - 108970 + | conjugal transfer pilus acetylation protein TraX TERM 108 109214 - 109196 - g 82 -2.2 -5.40072 | opp_overlap 109199 109205 CTGGCGGCAAAAAAA GCGCAGGC CAG ACAGGCGC TGTCCATTTATCTGA TERM 109 109297 - 109333 + G 70 -10 -3.14344 | ATTATTTGACGGTGA CACGCCCCGGCTTCTG GCCTG CGGTATCCGGGACGTG TTACTGGAAGACGTG TERM 110 109396 - 109382 - g 95 -7 -5.24129 | overlap 109384 CTCTCGCATAAAAAA CTGCGC AGG GCGCTG AAGGCCATCACCCGT finO 109025 - 109585 + | conjugal transfer fertility inhibition protein FinO TERM 111 109612 - 109591 - f 100 -10.1 -6.02919 | TGAGAAATAAAAAAA GCCTCCCCC AGAG AGAGGAGGC AGGGAAATAAGGCTT TERM 112 109728 - 109717 - g 71 -3 -4.77567 | AGGGGGACAAGAAAA TGAA TGGA TTCA GAAACAGTTCACGGA yigA 109716 - 109928 + | hypothetical protein TERM 113 109970 - 109937 - f 91 -7.5 -5.26875 | gap 1, overlap 109938 GGGGTAACGAAAAAA GCAGCCTTCATTACTC CAG GAGTCA-GAAGGCTGA AAGGAGTTTATGAGA TERM 114 109969 - 109938 - f 86 -11 -3.75402 | gap 1, overlap 109937 GGGTAACGAAAAAAG CAGCCTTCATTACTC CAG GAGTCA-GAAGGCTG AAAGGAGTTTATGAG SBO_P130 110172 - 110633 + | hypothetical protein hmo 110679 - 110888 + | putative regulator SBO_P132 110927 - 111517 + | hypothetical protein TERM 115 111989 - 111977 - g 72 -6.3 -4.37092 | AGTTCGTTGAGAAAA TCATC AAA GATGA ACTGCAGAGACTGGA repB 111757 - 112017 + | replication protein TERM 116 112189 - 112143 - f 100 -9 -5.1417 | gap 1 CCAGAAAAGCAAAAA CCCCGATAATCTTCTTTAACT TTGGCG AGTCAGA-AAGATTACCGGGG CCCACTTAAACCGTA TERM 117 112436 - 112418 - g 70 -5.9 -4.22346 | opp_overlap 112418 112417 112420 GAAACTGATGGAAAA GGCGGTG GGCTT CACCTCC CGTTTTGATTTCGCC repA 112308 - 113165 + | replication protein TERM 118 113201 - 113186 - f 83 -10.4 -3.79113 | ACCTCCTCAGAATAA TCCGGC ACGC GCCGGA GGCATTCGCACGCCT TERM 119 113703 - 113653 - f 100 -21.2 -2.57132 | opp_overlap 113653 113659, overlap 113659 CCCCTCCCTCATAAC TGAAAAGCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 120 113653 - 113703 + F 93 -14.6 -3.43961 | opp_overlap 113653 113659, overlap 113659 CCCCTCCCTCATAAC TGAAAAGCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 121 113697 - 113659 - f 100 -20.2 -4.3208 | opp_overlap 113659 113653, overlap 113653 CCTCATAACTGAAAA GCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGC TTTTAATTATGAATG TERM 122 113659 - 113697 + F 100 -13.6 -4.50058 | opp_overlap 113653 113659, overlap 113653 CCTCATAACTGAAAA GCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGC TTTTAATTATGAATG TERM 123 114007 - 113991 - f 93 -15.1 -2.87881 | overlap 113979 TAAGTCCCCGATACA GCGCGGC ATA GCCGCGC TAACGGGGTTAAAAG SBO_P135 114273 - 114497 + | hypothetical protein SBO_P136 115852 - 114653 - | IS1294 transposase TERM 124 114969 - 114981 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 125 115065 - 115079 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 126 115600 - 115610 + g 79 -4.6 -5.00616 | overlap 115595 115594 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC SBO_P137 116412 - 116065 - | IS629 ORF1 TERM 127 117430 - 117417 - g 71 -2.4 -4.93877 | opp_overlap 117417 TCCCACTAAATAAAA CACA TCATAC TGTG GATTTTGGTGCTAAT TERM 128 118166 - 118153 - g 70 -5.3 -4.32649 | opp_overlap 118153 ATTTCAAAAAGCAAA TAGTG GGGA CACTA TGCTTGACAATGCAA ospC2 116804 - 118258 + | OspC2 TERM 129 118290 - 118300 + T 85 -5.4 -5.29716 | GTTGTGCCCTGAATC TGAC GTT GTCA TTTTTGTTATATTGA SBO_P139 119605 - 118397 - | IS1294 transposase TERM 130 118713 - 118725 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 131 118809 - 118823 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 132 119344 - 119354 + g 79 -4.6 -5.00616 | overlap 119339 119338 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC SBO_P140 120130 - 120432 + | hypothetical protein SBO_P141 120423 - 120905 + | hypothetical protein SBO_P142 120973 - 121275 + | IS600 ORF1 SBO_P143 121311 - 121499 + | IS600 ORF2 SBO_P144 121904 - 121539 - | IS629 ORF2 SBO_P145 121915 - 122253 + | IS911 ORF1 TERM 133 122359 - 122339 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 134 122711 - 122700 - g 77 -5.8 -4.63218 | opp_overlap 122705 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_P146 122280 - 123119 + | IS911 ORF2 SBO_P147 123835 - 123143 - | hypothetical protein SBO_P148 123891 - 124043 + | IS3 ORF2 TERM 135 125200 - 125222 + F 100 -2.1 -6.20267 | ATCTATGGCCCCCGT TACTTTATT CGCAC AATGAGGTA TTTTTTTATTTTTAC icsP/sopA 125379 - 126326 + | outer membrane protease SEQUENCE gi|82542618|ref|NC_007613.1| Shigella boydii Sb227, complete genome (length 4519823) TERM 1 653 - 641 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTGG TERM 2 2666 - 2653 - g 73 -3.7 -4.81249 | overlap 2654 GTTCAAAGTGAAAAA TGGCG AAAA CGCCC TGGCCTTTTATAGCC thrA 335 - 2797 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2799 - 3731 + | homoserine kinase TERM 3 4448 - 4419 - g 81 -12.9 -2.72661 | gap 1, opp_overlap 4416 TACTACTTTGAAGCA GTTGCGCAGCTGCC GCA GGAAGC-GCGCAAC CAGCTGGTTGTCTCG thrC 3732 - 5018 + | threonine synthase TERM 4 5042 - 5068 + F 91 -8 -5.24129 | gap 1, opp_overlap 5041 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA SBO_0004 5232 - 5528 + | hypothetical protein TERM 5 5556 - 5537 - T 73 -7.8 -4.13654 | overlap 5550 CCGCTAAATGACAAA TGCCGGGT AACA ATCCGGCA TTCAGCGCCTGATGC TERM 6 5637 - 5668 + T 70 -10 -3.06133 | opp_overlap 5647 CTGCATGCTTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTGACTGCAAACTTA yaaA 6457 - 5681 - | hypothetical protein TERM 7 6229 - 6212 - G 73 -9.1 -3.5882 | overlap 6220 6221 GACATCACCTTTAAA CGCCAGA ATCG CCTGGCG GGCATTCGCCGGCGT SBO_0006 6869 - 6639 - | putative IS1 encoded protein insB 6962 - 7465 + | IS1 ORF2 TERM 8 8503 - 8487 - f 75 -11.5 -3.02144 | CCACCGGCGGTAATA GCCAGCG CAA CGCCGGC CAGGTTGCCGCTACC talB 9013 - 9966 + | transaldolase B TERM 9 9973 - 10002 + F 80 -12.9 -2.5294 | overlap 9972 9970 CTGCTGTAATCATTC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAGCCTG mogA 10081 - 10668 + | molybdenum cofactor biosynthesis protein TERM 10 10691 - 10674 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC GAGC GGGGGGA TCTCAAAACAATTAG yaaH 11269 - 10703 - | hypothetical protein TERM 11 11153 - 11143 - G 75 -6.8 -4.36914 | TGCCGCTGTAGAAAA TGCC CAT GGCA AGAATAATACCGTCC SBO_0012 12131 - 11418 - | hypothetical protein TERM 12 11879 - 11924 + g 89 -13.5 -3.29511 | gap 1, opp_overlap 11916 11917, overlap 11885 GATACAATTTACCGT GTCCGCGCAGTTTGTTGGCGAT ACT ATCGCCAACAAACTGC-TGTAA TTCTCCAGCAATCAG TERM 13 11885 - 11919 + g 100 -24.6 -2.96274 | opp_overlap 11916 11917, overlap 11879 ATTTACCGTGTCCGC GCAGTTTGTTGGCGAT ACT ATCGCCAACAAACTGC TGTAATTCTCCAGCA TERM 14 12017 - 12029 + g 80 -5.5 -4.93968 | overlap 12008 TCAGTACGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT insB 12859 - 12356 - | IS1 ORF2 SBO_0014 12934 - 13155 + | putative IS1 encoded protein dnaK 13301 - 15217 + | molecular chaperone DnaK TERM 15 15281 - 15242 - f 84 -13.6 -2.91467 | gap 1, opp_overlap 15243 AAACGGGTAATTATA CTGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAT TERM 16 15243 - 15280 + F 100 -17.1 -3.25823 | gap 1, opp_overlap 15242 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 17 15387 - 15374 - g 71 -2.3 -4.98531 | GCGTGAAATCAAAAA GGCCT ACAA ACGCC TGGCCATGAAATACC TERM 18 16381 - 16391 + G 70 -6.8 -4.03811 | overlap 16383 AGCACAACAGCCCGC GCTC AAA GAGC TTCTTTGATGGTGTG dnaJ 15306 - 16436 + | chaperone protein DnaJ TERM 19 16465 - 16448 - T 95 -12.7 -4.09739 | CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CTGGGTAAAAATAGG TERM 20 16512 - 16533 + T 90 -13.7 -3.39449 | opp_overlap 16511 16512, overlap 16513 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 21 16533 - 16512 - T 73 -11.5 -2.74792 | opp_overlap 16512 16513, overlap 16511 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 22 16513 - 16532 + T 90 -15 -2.63348 | opp_overlap 16512 16511, overlap 16512 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG gef 16749 - 16540 - | Gef TERM 23 16757 - 16789 + H 72 -4.9 -4.64844 | gap 1, opp_overlap 16725 TTCAGCATATAGGGG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC TERM 24 17310 - 17323 + G 70 -6.7 -4.06611 | overlap 17307 ATTCTTTAGCAGTGA TGCCT CGGG AGGCA TTATTCTTATCATTG nhaA 17278 - 18444 + | pH-dependent sodium/proton antiporter TERM 25 18460 - 18479 + F 93 -10.7 -4.59414 | CAGGACGGTTTACCG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 18504 - 19409 + | transcriptional activator NhaR SBO_0020 20077 - 19907 - | putative IS1 encoded protein insB 20170 - 20673 + | IS1 ORF2 TERM 26 20862 - 20877 + T 74 -6 -4.57341 | opp_overlap 20863, overlap 20863 AGCAGGCATAAAAAA ACCCGC TTGC GCGGGC TTTTTCACAAAGCTT TERM 27 20863 - 20876 + T 73 -9.5 -3.33922 | opp_overlap 20863, overlap 20862 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 28 20876 - 20863 - T 100 -9.5 -5.64274 | opp_overlap 20862 20863 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 29 20892 - 20923 + T 72 -10.3 -2.89683 | opp_overlap 20901, overlap 20896 20900 CTTTTTCACAAAGCT TCAGCAAATTGGC GATTAA GCCAGTTTGTTGA TCTGTGCAGTCAGGT rpsT 21170 - 20907 - | 30S ribosomal protein S20 SBO_0023 21273 - 21491 + | hypothetical protein TERM 30 22390 - 22378 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 21499 - 22440 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 31 22649 - 22631 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 32 23638 - 23617 - g 71 -9.5 -3.55622 | gap 1 GTGAACGTCTTCAAA GCG-AACGAC ATC GTCGTTGCGC TGCTGCAGGAAAAAG TERM 33 23701 - 23678 - g 81 -8.8 -4.38712 | overlap 23679 TGCACGTTGAGAAAA TGCAGCACAG CTAT CCGTGCTGCT GGCGTCACAAAACGC TERM 34 23700 - 23679 - g 81 -12.3 -3.22906 | overlap 23678 GCACGTTGAGAAAAT GCAGCACAG CTAT CCGTGCTGC TGGCGTCACAAAACG ileS 22483 - 25299 + | isoleucyl-tRNA synthetase TERM 35 25416 - 25382 - g 71 -9.2 -3.44848 | opp_overlap 25406, overlap 25380 TCTGGGCAGCAAATA CCTGATCCTCCAGAAC TTT GCTCTGGGGGATACGG TCCCGCTGTTCCCGT lspA 25299 - 25793 + | lipoprotein signal peptidase TERM 36 25835 - 25798 - f 100 -12.7 -4.68451 | overlap 25799 25800 AAAAACAATAATAAA CCCTGCCGGATAAGGCG TTTA CGCCGCATCCGGCAAAA ATCCTCAAATATAAG TERM 37 25834 - 25799 - f 90 -14 -3.37411 | overlap 25798 25800 AAAACAATAATAAAC CCTGCCGGATAAGGCG TTTA CGCCGCATCCGGCAAA AATCCTCAAATATAA TERM 38 25833 - 25800 - f 90 -15.3 -2.60006 | overlap 25799 25798 AAACAATAATAAACC CTGCCGGATAAGGCG TTTA CGCCGCATCCGGCAA AAATCCTCAAATATA TERM 39 25939 - 25916 - g 88 -11 -4.14243 | CACTTCACGCTAAAA CTCGACGATG GCAC CACCGCCGAG TCTACCCGCAACAAC slpA 25862 - 26311 + | FKBX-type 16KD peptidyl-prolyl cis-trans isomerase ispH 26313 - 27263 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 40 27311 - 27292 - f 79 -9.3 -4.15453 | opp_overlap 27292 27309 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 41 27292 - 27311 + F 100 -9.3 -5.24129 | opp_overlap 27292, overlap 27309 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA yaaF 27329 - 28243 + | ribonucleoside hydrolase RihC dapB 28410 - 29231 + | dihydrodipicolinate reductase TERM 42 30622 - 30594 - g 73 -3.7 -4.84761 | overlap 30595 30618 AGATGTGGAGAAAAA CGTGGTGATGATC ACC GCCCAGAACCACG GTTTTGCGGTGGATG carA 29686 - 30834 + | carbamoyl phosphate synthase small subunit TERM 43 33436 - 33417 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC AAAAGTGGCGGCGCG carB 30852 - 34073 + | carbamoyl phosphate synthase large subunit TERM 44 34127 - 34146 + T 100 -10 -5.77853 | opp_overlap 34125 34127 ATCGAATAAGTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTTGCCCATT insB 34697 - 34194 - | IS1 ORF2 TERM 45 35134 - 35170 + G 77 -7.3 -4.49556 | opp_overlap 35139, overlap 35136 35140 AATGTTCCTCATTGA TATCATCGCCATCGG CGTGATA TCGGTGGCGACGATG TTTGTTTCATCCCCC TERM 46 35325 - 35343 + G 77 -12.4 -2.80113 | CCGCCATGTGGTATG TCGGCGCG ACC TGCGCCGA TCTGGTCGGCTACTG yaaU 34811 - 36226 + | putative transport protein yabF 36308 - 36838 + | glutathione-regulated potassium-efflux system ancillary protein KefF kefC 36831 - 38693 + | glutathione-regulated potassium-efflux system protein KefC folA 38885 - 39364 + | dihydrofolate reductase TERM 47 39388 - 39422 + T 82 -12.1 -3.322 | opp_overlap 39381, overlap 39389 AGAATTTACGGCTAG TGCCGGATGCGACGC CGGTC GCGTCTTATCCGGCC TTCCTATATCAGGCT TERM 48 39389 - 39421 + T 90 -15.6 -2.58999 | opp_overlap 39381, overlap 39388 GAATTTACGGCTAGT GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC CTTCCTATATCAGGC apaH 40284 - 39442 - | diadenosine tetraphosphatase apaG 40668 - 40291 - | ApaG TERM 49 40379 - 40400 + g 72 -8.7 -3.71527 | gap 1, overlap 40392 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 50 40470 - 40452 - G 76 -11 -3.30124 | opp_overlap 40438 40452 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 41492 - 40671 - | dimethyladenosine transferase pdxA 42478 - 41489 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 51 42344 - 42327 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG surA 43764 - 42478 - | peptidyl-prolyl cis-trans isomerase SurA imp 46171 - 43817 - | organic solvent tolerance protein TERM 52 45669 - 45692 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 45659 45669, overlap 45659 45689 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCACCACGTTGT TERM 53 46561 - 46547 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 54 46564 - 46584 + G 74 -3.1 -5.00884 | opp_overlap 46566, overlap 46572 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 46426 - 47241 + | DNA-J like membrane chaperone protein TERM 55 47294 - 47250 - T 72 -9.1 -3.6512 | opp_overlap 47268, overlap 47265 47268 TAAATAAGTTTTAAA CTGTAGGCCTGATAAGACGCG GCC CGCGTCGCATCAGGCAATCGG CGCACAATTGCCGGA TERM 56 47279 - 47265 - T 79 -11.4 -3.30124 | opp_overlap 47268, overlap 47250 47268 CTGTAGGCCTGATAA GACGCG GCC CGCGTC GCATCAGGCAATCGG TERM 57 47343 - 47375 + T 75 -9.9 -3.58522 | gap 1, opp_overlap 47341, overlap 47370 TCCGCCTACCGAACT GCGCCAGCGTGACT ATTAAA AATC-CGCTGGCGC TTTAAACGTCATACT yabO 48017 - 47358 - | 23S rRNA/tRNA pseudouridine synthase A TERM 58 47750 - 47786 + g 72 -8.6 -3.72576 | gap 1, overlap 47752 GCTTTTTCGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC hepA 50935 - 48029 - | ATP-dependent helicase HepA TERM 59 48078 - 48090 + g 76 -9.1 -3.77219 | TCCAGACGCCAACCT GCCTG ATC CAGGC TTTCCATTACCTGCT TERM 60 49797 - 49821 + g 70 -10 -3.16944 | overlap 49795 AGCGGCTCGATATCC TGCTCGCCGA TCATC TCGCCGAGCA TGTTCAGTTCGTCAT polB 53450 - 51099 - | DNA polymerase II TERM 61 51165 - 51154 - G 77 -5.8 -4.64676 | overlap 51155 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 62 53260 - 53211 - G 71 -10.7 -2.89602 | gap 1, overlap 53210 GGCGCGACAGTAAAG GCCATACACCGGCTGGCGGTGAAA ATC CTTTAACGCCAGC-GGTGTCAGGC GAAAGCCTTGTTCAC TERM 63 53491 - 53471 - R 100 -8.3 -5.19261 | opp_overlap 53471 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC TERM 64 53471 - 53491 + r 76 -8.3 -4.14598 | opp_overlap 53471 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC araD 54220 - 53525 - | L-ribulose-5-phosphate 4-epimerase TERM 65 54280 - 54313 + r 70 -9.5 -3.05816 | opp_overlap 54290 54292 54293, overlap 54302 54303 AAATCGCAGCGCGTA GGCCTGATAAGACGC GCCA GCGTCGCATCAGGCG TTGAATGCCGGATGC TERM 66 54302 - 54330 + r 80 -9.5 -3.9941 | opp_overlap 54290 54293 54292, overlap 54280 54303 TAAGACGCGCCAGCG TCGCATCAGGCGT TGA ATGCCGGATGCGC TTTGCTTATCCGGCC TERM 67 54303 - 54329 + r 82 -13 -2.99325 | opp_overlap 54293 54292, overlap 54280 54302 AAGACGCGCCAGCGT CGCATCAGGCGT TGA ATGCCGGATGCG CTTTGCTTATCCGGC araA 55922 - 54420 - | L-arabinose isomerase araB 57633 - 55933 - | ribulokinase TERM 68 56248 - 56272 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTGACGGCGATC TERM 69 56995 - 56972 - G 72 -5.3 -4.49958 | gap 2, opp_overlap 56975, overlap 56974 AGCTCATCAAAGAAA CTGGCTGGCGG CAAG CCGCC--CCAG CTTTCGTGCCACAGA TERM 70 57742 - 57728 - H 82 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGA ATAGCA AAGTGTGACGCCGTG araC 57972 - 58850 + | DNA-binding transcriptional regulator AraC TERM 71 59474 - 59493 + G 76 -4.2 -4.92314 | overlap 59476 GCGAGTTTAAATGGT TGCTGCTG GCGA CGGCGGTA TTTTTGTGGGTTGGT yabI 58936 - 59700 + | hypothetical protein thiQ 60511 - 59813 - | thiamine transporter ATP-binding subunit thiP 62105 - 60495 - | thiamine transporter membrane protein TERM 72 60585 - 60573 - G 78 -10.5 -3.48036 | TAGCAGCAGAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA TERM 73 60951 - 60939 - G 77 -6.9 -4.49314 | GAGCAGTAAAAAGAA GCCGG TAG CCAGC ACAATCCCCGGCATG TERM 74 61594 - 61561 - G 81 -4.3 -5.10029 | opp_overlap 61586, overlap 61562 ACGAAGCGGAAAAAA TGCCAGCCGCGCATC CCAA GCTGGGCGGCAAGCT GACGTTGTTCGTCGG tbpA 63064 - 62081 - | thiamine transporter substrate binding subunit TERM 75 62928 - 62938 + g 91 -5.4 -5.32699 | overlap 62931 TCGCAGTTACAGTCG GCTT CAA AAGC TTTTTTGATCTTTGG yabN 64883 - 63228 - | transcriptional regulator SgrR TERM 76 64354 - 64342 - G 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGATATTTGCTGCC TERM 77 65149 - 65169 + H 100 -9.7 -6.17268 | GTGTAAAATCACCCG CCAGCAGAT TAT ACCTGCTGG TTTTTTTTATTCTCG yabM 65205 - 66287 + | putative transport protein TERM 78 66328 - 66309 - T 100 -15 -3.64599 | GGACGATAGCGGAAA GCCCGGTC ATTT GACCGGGC AAGGGGATTAATTCA leuD 66941 - 66336 - | isopropylmalate isomerase small subunit TERM 79 66772 - 66782 + g 72 -4.6 -4.72272 | overlap 66777 ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCGAGAAA leuC 68352 - 66952 - | isopropylmalate isomerase large subunit TERM 80 67760 - 67781 + g 74 -7.9 -4.12902 | overlap 67778 AACTCCACCACATGC CCGGTGCCG CCTG CGCTACCGG TTTTACCGATAATTG TERM 81 67871 - 67883 + g 76 -9.1 -3.75629 | ATGGTTTTTGCGCGG CCCTG TTT CAGGG TTTGCGTTGCCAGTA leuB 69446 - 68355 - | 3-isopropylmalate dehydrogenase leuA 71017 - 69446 - | 2-isopropylmalate synthase TERM 82 70151 - 70162 + g 72 -5.8 -4.41616 | GGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 83 70867 - 70857 - G 72 -6.8 -4.19817 | TGCACTGATTCAAAA TCGC CCG GCGA AGAGACGGGGAAACC TERM 84 71085 - 71068 - R 100 -14.1 -5.60993 | opp_overlap 71068 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG TERM 85 71068 - 71085 + r 100 -14.1 -5.65927 | opp_overlap 71068 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG leuL 71196 - 71110 - | leu operon leader peptide insB 71769 - 72272 + | IS1 ORF2 TERM 86 72671 - 72681 + F 71 -6.8 -4.07568 | GTACAAAATGAATTG CCTG GTT CAGG TTTTGAACCCGCGAG TERM 87 73321 - 73360 + F 100 -16 -5.49234 | opp_overlap 73321, overlap 73354 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TGAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 88 73354 - 73379 + F 71 -3.4 -4.79955 | opp_overlap 73321 73377, overlap 73321 TGAATGTCTGGTTTA TTCTGCATTT TTTATT GAATGTAGAA TTTTATTCTGAATGT TERM 89 73479 - 73495 + F 72 -5.1 -4.68612 | opp_overlap 73479 TTATTATCAATTTAA TCCTTCG TAA TGGAGGA TTTTATCGTTTCTTT TERM 90 73592 - 73604 + F 83 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCATCAAAC TERM 91 74946 - 74936 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 73633 - 75357 + | acetolactate synthase 3 catalytic subunit ilvH 75360 - 75851 + | acetolactate synthase 3 regulatory subunit TERM 92 75877 - 75897 + G 91 -5.3 -5.41143 | AGTGTGCAATTTGCA GCCCAACAT GTC ACGCTGGGC TTTTTTTGCGAAATC fruL 75863 - 75949 + | fruR leader peptide fruR 76031 - 77035 + | DNA-binding transcriptional regulator FruR TERM 93 77081 - 77050 - f 100 -13.8 -5.06816 | gap 1, overlap 77036 AGCCGCGAACAAAAA TACGCGCCAG-GTGA ATT TCCCTCTGGCGCGTA GAGTACGGGACTGGA yabB 77637 - 78095 + | cell division protein MraZ TERM 94 78336 - 78364 + G 76 -12.4 -2.52623 | overlap 78335 CCACGGACCTTTCTC CGCGCTGGGCGA ATACG TTGCCGAGCGCG ATCTTATCGGCAAGA mraW 78097 - 79038 + | S-adenosyl-methyltransferase MraW TERM 95 79359 - 79346 - g 76 -8.1 -4.18494 | opp_overlap 79345 79343 GATCGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 79035 - 79400 + | cell division protein FtsL TERM 96 79463 - 79483 + G 78 -7.6 -4.37734 | opp_overlap 79461 79463 79464, overlap 79464 ACGTCAGGAAGAACA TGCCAACT TTATT AGTTGGCG TTTTGCGTTGTTATG TERM 97 80982 - 81003 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 80951, overlap 80985 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 98 80985 - 81000 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 80951, overlap 80982 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 99 81041 - 81059 + G 73 -11.6 -2.67171 | opp_overlap 81038 81035, overlap 81038 81040 81039 81055 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 79416 - 81182 + | penicillin-binding protein 3 TERM 100 82280 - 82270 - g 81 -6.8 -4.62783 | GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGTCTGCACTG murE 81169 - 82656 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 101 83093 - 83054 - g 87 -13.6 -3.07443 | opp_overlap 83063, overlap 83063 TTATACGGCAGGCAA TCTCAACAACGACATCGG TGTA CCGATGACGTTGTTGCGC TTAACGCCGGAATAC TERM 102 83084 - 83063 - g 77 -10.1 -3.6849 | opp_overlap 83063, overlap 83054 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG TTGTTGCGCTTAACG TERM 103 83063 - 83084 + G 77 -10.1 -3.68222 | opp_overlap 83063 83054 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG TTGTTGCGCTTAACG TERM 104 83851 - 83833 - g 70 -5.2 -4.41348 | opp_overlap 83847, overlap 83837 GCGTGGGTAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 82653 - 84011 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 84005 - 85087 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 105 85169 - 85189 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA murD 85090 - 86406 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 86406 - 87650 + | cell division protein FtsW TERM 106 88155 - 88170 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 87647 - 88714 + | N-acetylglucosaminyl transferase murC 88768 - 90243 + | UDP-N-acetylmuramate--L-alanine ligase ddl 90236 - 91156 + | D-alanine--D-alanine ligase ftsQ 91158 - 91988 + | cell division protein FtsQ ftsA 91985 - 93247 + | cell division protein FtsA SBO_0084 94567 - 93269 - | hypothetical protein lpxC 94560 - 95477 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 107 95504 - 95547 + FH 100 -4.5 -6.17292 | opp_overlap 95504 95516 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT yacA 95708 - 96220 + | SecA regulator SecM TERM 108 98057 - 98070 + G 75 -4.5 -4.8622 | opp_overlap 98057 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC TERM 109 98882 - 98842 - g 74 -8.9 -3.96327 | AGCGTTTAGCACAAA TGCAGCAGCTTAGCCATCA GGA TGACGACTCTGCAGCCGCA GCTGCACTGGCGGCG secA 96282 - 98987 + | preprotein translocase subunit SecA TERM 110 99026 - 99009 - f 100 -12.7 -4.41047 | opp_overlap 99009 ACTGTTGAAGCAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 111 99009 - 99026 + F 100 -12.7 -5.33866 | opp_overlap 99009 ACTGTTGAAGCAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA mutT 99047 - 99436 + | nucleoside triphosphate pyrophosphohydrolase TERM 112 99444 - 99473 + T 76 -12.1 -2.72144 | opp_overlap 99453 99454, overlap 99443 99454 GTCTGTAGTCTGTAG GTCGGATAAGGCG TTCA CGCCGCATCCGAC ATTTGCACAAGATGC SBO_0088 99592 - 99458 - | hypothetical protein TERM 113 99486 - 99520 + gT 72 -10.7 -2.87931 | opp_overlap 99454 99486 99484 99487, overlap 99454 99496 GACATTTGCACAAGA TGCCTGATGCGACGC TGTCC GCGTCTTATCAGGCC TATGTGCGGCATCAG TERM 114 99519 - 99487 - GT 76 -12 -2.53449 | opp_overlap 99454 99486 99496, overlap 99454 99486 99484 ACATTTGCACAAGAT GCCTGATGCGACGC TGTCC GCGTCTTATCAGGC CTATGTGCGGCATCA yacG 99740 - 99543 - | zinc-binding protein yacF 100493 - 99750 - | hypothetical protein TERM 115 100105 - 100095 - G 70 -6.8 -4.08485 | TGTAGGTAAATCAAA GCTG CAA CAGC CGCCTGGGATGCTCA TERM 116 100175 - 100205 + g 72 -6.8 -4.21462 | GAAATTGCCCGATAC GCGGCGCGGA AATTAATACGC TCCCCGCCGC TTTTAACTGCTGAAT coaE 101113 - 100493 - | dephospho-CoA kinase TERM 117 100817 - 100868 + g 74 -2.3 -5.0916 | gap 2, opp_overlap 100843 AGTAGCTTGCTGGAT CTGGTGTTGCGTCTCTTGCTGAATC AGCG GATGCAGCA-GGG-CGTTAAGCCAG TTTTTCTCTTCCGGG TERM 118 101086 - 101051 - G 76 -9 -3.81951 | overlap 101052 TCCGAGATCAGCAAA CGCATTGGCAACGGTA CTCT TGCCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 119 101085 - 101052 - G 78 -12.5 -2.88849 | overlap 101051 CCGAGATCAGCAAAC GCATTGGCAACGGTA CTCT TGCCACTGCCAATGC CTCCCGTTAAGGCAA SBO_0093 102408 - 102301 - | hypothetical protein guaC 101338 - 102381 + | guanosine 5'-monophosphate oxidoreductase TERM 120 102390 - 102415 + gT 85 -12.6 -3.32963 | CCTGTAATCTTCCAA CGCTGGTGTG GAGCAA CACGCCAGCG TTATCCCATCCCACT hofC 103618 - 102416 - | type IV pilin biogenesis protein TERM 121 103088 - 103074 - G 73 -4.2 -4.77165 | TCCGGCAGAACAAAA TGCAGC ATT GCCACA ACCACCATGATTGCC TERM 122 103673 - 103686 + H 76 -8.1 -4.07885 | TTAAGCCTTGCTCCA CGGCT AGGC AGCCG TTTTCAAAAAGCGTA insB 105502 - 106005 + | IS1 ORF2 nadC 107305 - 106412 - | quinolinate phosphoribosyltransferase TERM 123 106677 - 106699 + g 72 -5.4 -4.58283 | TCGACTTCTACTGGC GCATCCGGGT GCA GCCAGGACGC TTTTTCGACGGCTTG TERM 124 107864 - 107892 + G 70 -11 -2.70979 | gap 1, overlap 107860 GGCCATTGTGATATT GCGCC-GGATCGG AAAA CCGATCCCGGCCC TGCATTTGATTGGGC ampD 107393 - 107944 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 107941 - 108795 + | regulatory protein AmpE TERM 125 108830 - 108802 - T 72 -10.2 -2.84325 | overlap 108799 TTGGTGTAAAGATTA TTGCCCTCACCC TGTAC GGGTGAGGGCGT AGAGAGATTAATGCG aroP 110211 - 108838 - | aromatic amino acid transporter pdhR 110752 - 111516 + | transcriptional regulator PdhR TERM 126 111637 - 111590 - f 73 -11.4 -2.70979 | opp_overlap 111607, overlap 111586 111587 111593 CGGCAACTAAACGTA GAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 127 111896 - 111884 - g 78 -9.1 -3.9461 | opp_overlap 111883 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG aceE 111677 - 114340 + | pyruvate dehydrogenase subunit E1 aceF 114355 - 115944 + | dihydrolipoamide acetyltransferase TERM 128 115972 - 115951 - f 95 -11.5 -4.43477 | opp_overlap 115953, overlap 115953 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 129 115970 - 115953 - f 100 -14.1 -3.82321 | opp_overlap 115953, overlap 115951 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 130 115953 - 115970 + F 100 -14.1 -5.32882 | opp_overlap 115953 115951 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 131 117133 - 117105 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TGGACGACCGTGGTT lpdA 116269 - 117693 + | dihydrolipoamide dehydrogenase TERM 132 117728 - 117694 - T 72 -9.4 -3.62255 | opp_overlap 117684 GCGAAGAAGAAGTAA TTTTTCGTTTGCCGGA ACA TCCGGCAATTAAAAAA GCGGCTAACCACGCC TERM 133 117729 - 117745 + T 91 -6.5 -5.51402 | opp_overlap 117729 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGT TERM 134 117745 - 117729 - T 85 -6.5 -5.26875 | opp_overlap 117729 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGT yacH 119587 - 117764 - | hypothetical protein TERM 135 117916 - 117901 - G 70 -4.7 -4.56597 | CTCTCTCCCGAAAAA CCTGA CGTTGT TCAGG TGATGCTGATTGAAC TERM 136 117962 - 117982 + g 73 -3.9 -4.8622 | overlap 117965 ATCACGTTGCTGTTG GTTCAGTGG GCG CTGCTGTAC TTTTTCCTTAAACAC TERM 137 119508 - 119526 + g 81 -4.5 -5.03994 | GATTGCGTTTCCACA GCCGC TTCCACTGT GCGGC TTTTTATATATAGCC TERM 138 119746 - 119734 - H 71 -7.7 -3.86346 | GGATTCGTTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 139 120089 - 120078 - g 77 -7.2 -4.57837 | overlap 120079 120080 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT TERM 140 121699 - 121675 - g 70 -5.7 -4.30987 | ACCGTTGAGAAGAAA GGCAAGAAAAA CAT CTTCTCTGGCC GCATTCTGGAAATTG acnB 119971 - 122568 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 141 122604 - 122629 + F 100 -12.7 -5.72622 | gap 1, opp_overlap 122604 122596 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA TERM 142 122629 - 122604 - f 93 -12.7 -3.66897 | gap 1, opp_overlap 122604, overlap 122596 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA yacL 122743 - 123105 + | hypothetical protein TERM 143 123137 - 123111 - T 100 -18.8 -4.59982 | GCAGAAGTAAATAAA TCTGGCGGAGCC TGG AGCTCCGCCAGA GCCGTTAAACAGCTG speD 123936 - 123142 - | S-adenosylmethionine decarboxylase speE 124818 - 123952 - | spermidine synthase TERM 144 124900 - 124875 - R 74 -10.5 -3.24255 | opp_overlap 124875 124877, overlap 124868 124877 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 145 124898 - 124877 - R 77 -10.9 -3.17362 | opp_overlap 124877 124875, overlap 124875 124868 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 125394 - 124924 - | hypothetical protein TERM 146 125391 - 125401 + g 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 147 126822 - 126810 - g 70 -5.5 -4.3739 | overlap 126817 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGGCTCATCGCGCG yacK 125437 - 126987 + | multicopper oxidase TERM 148 127029 - 127006 - T 82 -11 -3.57462 | opp_overlap 127003 127008, overlap 127008 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTATTTCACAT TERM 149 127027 - 127008 - T 90 -13.6 -3.36515 | opp_overlap 127003 127008, overlap 127006 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC TERM 150 127008 - 127027 + T 93 -13.6 -3.65135 | opp_overlap 127008 127006, overlap 127003 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC gcd 129424 - 127034 - | glucose dehydrogenase TERM 151 127678 - 127660 - G 76 -11 -3.40597 | overlap 127658 CGCCCCATTCAAACA TTCCCAGG TTA CCCGGGAA GACCAGCGTGCCCTG TERM 152 128585 - 128595 + g 78 -8.2 -4.15328 | overlap 128586 128592 ATCCGCCATCACTTC CGGC GAA GCCG TTTCTGCTTTGGCTT hpt 129630 - 130166 + | hypoxanthine phosphoribosyltransferase TERM 153 130170 - 130203 + T 79 -3.1 -5.4182 | gap 1, overlap 130173 130174 CTGGACGAGTAAGTG TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA TTTTTATTTGTGGTT yadF 130869 - 130207 - | carbonic anhydrase TERM 154 131492 - 131508 + G 70 -3.5 -4.60924 | TGGATATTGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA yadG 130978 - 131904 + | putative ATP-binding component of a transport system yadH 131901 - 132671 + | hypothetical protein TERM 155 132678 - 132707 + F 95 -12.9 -4.10657 | overlap 132679 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT CGGGGGAGAGGAG TTTTGACGGCTATCA TERM 156 132679 - 132706 + F 85 -14.2 -3.06073 | overlap 132678 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT CGGGGGAGAGGA GTTTTGACGGCTATC yadI 132776 - 133216 + | putative PTS enzyme II B component panD 134895 - 134515 - | aspartate alpha-decarboxylase TERM 157 134594 - 134578 - G 73 -9.4 -3.63744 | opp_overlap 134562 134588, overlap 134576 GTCGCCTTCAAAATA GGCGAC GTTGG GTCGCC AGGTGCGAGCTTCTT TERM 158 134928 - 134942 + H 82 -11.4 -3.56099 | opp_overlap 134928 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 159 134942 - 134928 - H 79 -11.4 -3.33696 | opp_overlap 134928 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC yadD 135169 - 136065 + | hypothetical protein TERM 160 136261 - 136240 - T 79 -11.7 -3.14132 | GCTCCTGGGGATTAA TGAGAGACA TCCA TGTCTCTCA CCGAAGGCCAGCCTG TERM 161 136285 - 136267 - T 73 -10.2 -3.05463 | opp_overlap 136265 136282 ATGTCTCTCACCGAA GGCCAGCC TGC GGCTGGGC AAATTCGTTCCTGAC panC 137208 - 136357 - | pantoate--beta-alanine ligase panB 138014 - 137220 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 162 138087 - 138123 + r 79 -10.8 -3.63694 | opp_overlap 138089 138092, overlap 138088 GGGCAATGATTTATC AATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGAC TTATTAAGGGTAGGT TERM 163 138088 - 138122 + r 87 -14.3 -2.77895 | opp_overlap 138089 138092, overlap 138087 GGCAATGATTTATCA ATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGA CTTATTAAGGGTAGG TERM 164 138121 - 138089 - R 83 -13.4 -3.20435 | opp_overlap 138088 138087, overlap 138092 GCAATGATTTATCAA TTACCGCACCGCCA GATGA TGGCGGTGCGGTGG ACTTATTAAGGGTAG TERM 165 138118 - 138092 - R 100 -19.5 -2.79276 | opp_overlap 138088 138087, overlap 138089 ATGATTTATCAATTA CCGCACCGCCA GATGA TGGCGGTGCGG TGGACTTATTAAGGG SBO_0124 139060 - 138221 - | IS911 ORF2 TERM 166 138629 - 138640 + g 77 -5.8 -4.63218 | opp_overlap 138625 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 167 138981 - 139001 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG ecpD 141133 - 140393 - | putative chaperone protein EcpD TERM 168 141204 - 141162 - R 72 -5.9 -4.44548 | gap 1 CAGAGTTAATTAAAA CAGGGAATAATA-TAAAAAT AGAA ATTATTAACACTATTCCCTG GGTAATGACTCCAAC insB 141723 - 141220 - | IS1 ORF2 SBO_0129 142747 - 142538 - | putative IS1 encoded protein insB 142822 - 143325 + | IS1 ORF2 TERM 169 143469 - 143447 - T 79 -8 -4.3898 | opp_overlap 143449 ATGATTTTCAGAAAA TATTTATATT CGT AATATAAATA AATTACCATTTGCTT folK 143951 - 143472 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 145366 - 143948 - | poly(A) polymerase I yadB 146301 - 145405 - | glutamyl-Q tRNA(Asp) synthetase TERM 170 145693 - 145683 - G 81 -6.8 -4.65895 | opp_overlap 145692 CTTTCCAGCCAAAAA GCTG GTA CAGC GAGATTTGCCTTACT TERM 171 146342 - 146318 - R 85 -5.6 -5.4505 | opp_overlap 146321, overlap 146321 TCTTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 172 146339 - 146321 - R 100 -11.7 -4.81306 | opp_overlap 146321, overlap 146318 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT TERM 173 146321 - 146339 + r 79 -12.4 -2.79302 | opp_overlap 146321 146318 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT dksA 146823 - 146368 - | DnaK transcriptional regulator DksA sfsA 147705 - 147001 - | sugar fermentation stimulation protein A TERM 174 147663 - 147653 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC yadP 148259 - 147720 - | hypothetical protein TERM 175 147969 - 147957 - G 74 -10.5 -3.15544 | CGCCAGCTGGATTAA GCCGC GTG GCGGC TGACGCATCCCTAAC TERM 176 148088 - 148067 - G 70 -7.3 -4.07568 | opp_overlap 148067 148073, overlap 148073 TCCGTCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC GGCGCTCACTTCGCC hrpB 148279 - 150753 + | ATP-dependent RNA helicase HrpB TERM 177 151447 - 151470 + G 72 -8.8 -3.80841 | opp_overlap 151447 CCGGACAGTAAAGAA GGGCAGGTGC GTGC GCATCTGACC TTTGATGGTGATCAT TERM 178 151470 - 151447 - g 70 -6.6 -4.04806 | opp_overlap 151447 CCGGACAGTAAAGAA GGGCAGGTGC GTGC GCATCTGACC TTTGATGGTGATCAT TERM 179 152319 - 152305 - g 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAG mrcB 150949 - 153471 + | penicillin-binding protein 1b TERM 180 153513 - 153487 - f 100 -16.7 -3.61268 | CATCTAAGCGTGAAA TACCGGATGGC GAGTT GCCATCCGGTA AAATAACATCCCATC TERM 181 153596 - 153615 + F 76 -9.2 -3.68662 | GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT TERM 182 154424 - 154410 - g 76 -4.2 -4.98436 | opp_overlap 154410, overlap 154402 154412 CGAACAGCAGAAAAA CTCTGA ATC TCAGCG TTATACCATTGCTCC fhuA 153691 - 155880 + | ferrichrome outer membrane transporter TERM 183 155891 - 155912 + F 82 -11.5 -3.5774 | overlap 155892 155908 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCA TTTCACAAGTTGGCT TERM 184 155892 - 155911 + F 90 -15 -2.74322 | overlap 155891 155908 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC ATTTCACAAGTTGGC fhuC 155931 - 156728 + | iron-hydroxamate transporter ATP-binding subunit TERM 185 156751 - 156779 + G 88 -11 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGTCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 156728 - 157618 + | iron-hydroxamate transporter substrate-binding subunit TERM 186 157757 - 157771 + G 72 -4.3 -4.66163 | CGCCGGATATTGACG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 157615 - 159597 + | iron-hydroxamate transporter permease subunit TERM 187 159601 - 159627 + T 78 -12.2 -2.58579 | opp_overlap 159602, overlap 159600 CAGAGCCGTTAATTG AGTGCCTCGCCC GGT GGGCGAGGCAAA ATTATCACAACTTCG TERM 188 159626 - 159602 - T 90 -15.7 -2.53015 | opp_overlap 159601 159600 AGAGCCGTTAATTGA GTGCCTCGCCC GGT GGGCGAGGCAA AATTATCACAACTTC hemL 160912 - 159632 - | glutamate-1-semialdehyde aminotransferase TERM 189 159781 - 159771 - G 72 -6.8 -4.23615 | overlap 159767 ATCATATGGAAGAAA CGCT TAA AGCG TTCCACGTCACAGGC TERM 190 161189 - 161165 - g 88 -11.4 -3.85698 | overlap 161168 CTCCCTCTTTAGAAA CACCGCAGGC CGCGC GCCTGCGACG CAGACAACTGATTCG TERM 191 161186 - 161168 - g 73 -11.7 -2.70946 | overlap 161165 CCTCTTTAGAAACAC CGCAGGC CGCGC GCCTGCG ACGCAGACAACTGAT TERM 192 161707 - 161725 + G 81 -4.4 -5.14682 | overlap 161709 CTGGCTGCGGCCTTT AACGCGCC GCT GGCGGGTA TTTTGTTTATTATCG TERM 193 161709 - 161723 + G 72 -7 -4.18024 | overlap 161707 GGCTGCGGCCTTTAA CGCGCC GCT GGCGGG TATTTTGTTTATTAT yadQ 161137 - 162558 + | chloride channel protein TERM 194 162846 - 162832 - g 75 -5.6 -4.68994 | opp_overlap 162832 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 162640 - 162984 + | iron-sulfur cluster insertion protein ErpA TERM 195 162994 - 163022 + T 100 -14.7 -3.68024 | overlap 162996 ATCTAATCTGTTGTT CATGTGCCGGATA AAC TATCCGGCACATC TTCTCTCTTCAACGC TERM 196 162996 - 163020 + T 100 -17.3 -3.41962 | overlap 162994 CTAATCTGTTGTTCA TGTGCCGGATA AAC TATCCGGCACA TCTTCTCTCTTCAAC yadS 163654 - 163031 - | hypothetical protein yadT 164491 - 163697 - | vitamin B12-transporter protein BtuF TERM 197 163870 - 163858 - G 71 -9.1 -3.50853 | CGCCTGTAATGACAA TCGCC TGT GGCGA GCGTGCTAACACCTG TERM 198 164474 - 164456 - G 88 -11.7 -3.79419 | overlap 164454 TGGCGCGAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGACTTAGCC pfs 165182 - 164484 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 165266 - 166783 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 199 167244 - 167264 + G 70 -11.1 -2.78216 | opp_overlap 167241 167244, overlap 167241 AGCAACAGAAATTCA TGGCGCTGG GTT CCGGCGTCA TCATTGATGCCGATA htrA 166913 - 168337 + | serine endoprotease TERM 200 168348 - 168371 + F 95 -14.6 -3.52093 | opp_overlap 168348 AGTAATCTCACTCAA CCCCTTCCTG AAAA CGGGAAGGGG TTCTCCTTACAATCT TERM 201 168371 - 168348 - f 80 -12.4 -3.08173 | opp_overlap 168348 AGTAATCTCACTCAA CCCCTTCCTG AAAA CGGGAAGGGG TTCTCCTTACAATCT TERM 202 169495 - 169511 + G 88 -8.7 -4.59944 | ATGTGCAACCGCTGG CAACGTC AAA GGCGTTG TTTATTTATCGTAAT yaeG 168492 - 169637 + | carbohydrate diacid transcriptional activator CdaR yaeH 170112 - 169726 - | hypothetical protein TERM 203 169984 - 169998 + g 75 -7.1 -4.40003 | AAACTTAACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA yaeI 171065 - 170274 - | phosphodiesterase YaeI TERM 204 170803 - 170787 - G 72 -8.7 -3.82665 | GAGGACATCACTAAA CGCCGAA AAA TTCAGCG GCATATCAAATAATA TERM 205 171130 - 171108 - R 100 -10.5 -5.75342 | overlap 171109 TCCCTGCAAAAAAAA TCGGGCAGC GTCGT GCTGCCCGT GTGCATACTTTTAGT TERM 206 171129 - 171109 - R 100 -14 -4.04482 | overlap 171108 CCCTGCAAAAAAAAT CGGGCAGC GTCGT GCTGCCCG TGTGCATACTTTTAG dapD 171965 - 171141 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 207 171482 - 171501 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATGCCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC TERM 208 171681 - 171698 + g 72 -7.7 -3.922 | TTTCTGGAAACGTGC TTCGTCG TAGT CGGCGAA TTTCATTGGCACTTT glnD 174668 - 171996 - | PII uridylyl-transferase TERM 209 174708 - 174723 + r 82 -11.8 -3.4758 | opp_overlap 174708, overlap 174702 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC TERM 210 174723 - 174708 - R 100 -11.8 -5.15634 | opp_overlap 174708 174702 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC map 175524 - 174730 - | methionine aminopeptidase TERM 211 175474 - 175484 + g 74 -2.4 -5.15381 | overlap 175463 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 212 176302 - 176291 - g 72 -7.2 -4.24413 | overlap 176288 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 175892 - 176617 + | 30S ribosomal protein S2 TERM 213 176610 - 176598 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCTT TERM 214 176792 - 176812 + F 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 215 177047 - 177031 - g 77 -3 -5.13521 | gap 1, overlap 177032 177035 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 176875 - 177726 + | elongation factor Ts TERM 216 177737 - 177758 + F 100 -13.7 -4.84761 | opp_overlap 177737 177740 CTTAATTATCAAAAA GGAGCCGCC TAAG GGCGGCTTC TTTTTGTGCCCATCT TERM 217 177758 - 177737 - f 100 -11.5 -4.81083 | opp_overlap 177737, overlap 177740 CTTAATTATCAAAAA GGAGCCGCC TAAG GGCGGCTTC TTTTTGTGCCCATCT TERM 218 177755 - 177740 - f 82 -11.8 -3.30145 | opp_overlap 177737, overlap 177737 AATTATCAAAAAGGA GCCGCC TAAG GGCGGC TTCTTTTTGTGCCCA pyrH 177873 - 178598 + | uridylate kinase frr 178890 - 179447 + | ribosome recycling factor TERM 219 179447 - 179427 - f 76 -8.3 -4.14627 | opp_overlap 179427 179428 179430, overlap 179428 179430 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 220 179427 - 179447 + F 76 -8.3 -4.15044 | opp_overlap 179427 179428 179430, overlap 179428 179430 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 221 179428 - 179446 + F 78 -11.8 -3.08812 | opp_overlap 179428 179427 179430, overlap 179427 179430 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 222 179446 - 179428 - f 78 -11.8 -3.08294 | opp_overlap 179427 179428 179430, overlap 179427 179430 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 223 179460 - 179508 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 179466, overlap 179461 179466 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 224 179461 - 179507 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 179466, overlap 179460 179466 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 225 179466 - 179502 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 179466, overlap 179461 179460 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 226 179502 - 179466 - f 100 -13 -4.98255 | gap 1, opp_overlap 179466 179461 179460 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC yaeM 179539 - 180735 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 227 180840 - 180857 + F 100 -8.4 -5.71712 | TATAAGGTCAGGTAT GCCGTG GTTTTG CACGGC TTTTTTTGTATAGGC yaeS 180920 - 181681 + | undecaprenyl pyrophosphate synthase cdsA 181694 - 182551 + | CDP-diglyceride synthase yaeL 182563 - 183915 + | zinc metallopeptidase TERM 228 184454 - 184443 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 229 185178 - 185154 - g 70 -9.9 -3.14026 | opp_overlap 185150 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAAG TAGATGTAGTCTACA yaeT 183945 - 186377 + | outer membrane protein assembly factor YaeT TERM 230 186476 - 186459 - f 71 -7.7 -3.96216 | overlap 186460 GGGCCACGCAAAGAA CTGCACC CTCC GGTGCAA ATGGGATGGTAAGGA TERM 231 186961 - 186933 - g 80 -11.8 -3.28712 | overlap 186919 186918 186949 CGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 186499 - 186984 + | periplasmic chaperone TERM 232 187066 - 187041 - g 82 -13.3 -2.97245 | opp_overlap 187039, overlap 187036 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 186988 - 188013 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 233 188040 - 188077 + F 95 -12.7 -4.07515 | overlap 188042 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 234 188042 - 188075 + F 90 -13.1 -3.60967 | overlap 188040 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 188118 - 188573 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 188577 - 189365 + | UDP-N-acetylglucosamine acyltransferase TERM 235 189399 - 189420 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTAGGGGCCGG lpxB 189365 - 190513 + | lipid-A-disaccharide synthase TERM 236 190677 - 190666 - g 81 -7.2 -4.67011 | opp_overlap 190665 AAGCTGAGCGAAAAA CGCC GTCT GGCG CTCTGTGAAGAGATC rnhB 190510 - 191106 + | ribonuclease HII dnaE 191143 - 194571 + | DNA polymerase III subunit alpha TERM 237 194790 - 194776 - g 74 -2.8 -5.00616 | GTCTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 194637 - 195596 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 238 195634 - 195617 - f 80 -6.9 -4.61527 | opp_overlap 195617 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 239 195617 - 195634 + F 100 -9.1 -5.24129 | opp_overlap 195617 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 240 196691 - 196707 + F 76 -8 -4.27617 | CACTTCGATTCCGCC TGGGTG CCGTA CACCCA TTTTCATCCGATCTA yaeR 197861 - 198250 + | hypothetical protein TERM 241 198270 - 198290 + F 83 -13.3 -3.24925 | TGTCATCGCCGCATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT tilS 198315 - 199613 + | tRNA(Ile)-lysidine synthetase TERM 242 199652 - 199620 - T 93 -12 -3.76952 | overlap 199640 CTTAGTTAAGTGAAA GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC GAAAGTCAATCAGGA yaeO 199922 - 199662 - | Rho-binding antiterminator yaeP 200109 - 199909 - | hypothetical protein TERM 243 199946 - 199959 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 244 200570 - 200557 - g 76 -8.1 -4.24342 | opp_overlap 200566 CGGCGGATTAAGAAA GCCTG CACC CAGGC CGCAGAAGTGGCGCT yaeQ 200275 - 200820 + | hypothetical protein yaeJ 200817 - 201239 + | hypothetical protein cutF 201253 - 201963 + | lipoprotein involved with copper homeostasis and adhesion yaeF 202780 - 202163 - | hypothetical protein TERM 245 203026 - 203006 - R 100 -13.3 -5.10497 | opp_overlap 203006 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC TERM 246 203006 - 203026 + r 87 -11.1 -3.89346 | opp_overlap 203006 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 204754 - 203036 - | prolyl-tRNA synthetase TERM 247 204802 - 204784 - R 79 -11 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA yaeB 205572 - 204865 - | hypothetical protein TERM 248 205419 - 205444 + g 83 -12.6 -3.28924 | gap 1 AATGGCTGAACGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGGAGCAATG TERM 249 205469 - 205481 + g 70 -4.7 -4.57073 | overlap 205470 GCAATGAGATGCAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 205973 - 205569 - | outer membrane lipoprotein TERM 250 205837 - 205847 + g 74 -8.2 -3.92659 | overlap 205830 205841 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 251 206056 - 206033 - R 77 -11 -3.23975 | overlap 206030 206036 AGCTTGTAAAAATGA CAAGACGGGC AAGT GCCCATCCTG AATGATATTACAAAT TERM 252 206053 - 206036 - R 76 -9.1 -3.75505 | overlap 206033 206030 TTGTAAAAATGACAA GACGGGC AAGT GCCCATC CTGAATGATATTACA metQ 206906 - 206091 - | DL-methionine transporter substrate-binding subunit yaeE 207599 - 206946 - | DL-methionine transporter permease subunit metN 208623 - 207592 - | DL-methionine transporter ATP-binding subunit TERM 253 207913 - 207923 + g 77 -8.2 -4.13767 | overlap 207921 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA yaeD 208811 - 209383 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 254 209536 - 209522 - f 76 -4.2 -5.0916 | opp_overlap 209522, overlap 209523 209530 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 255 209568 - 209556 - f 71 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGCA TERM 256 211613 - 211576 - f 93 -6.3 -5.68438 | opp_overlap 211578 211606, overlap 211578 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 257 211578 - 211611 + F 75 -6.7 -4.49756 | opp_overlap 211576 211578, overlap 211606 ATTAAATAAAAAATA CTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 258 211611 - 211578 - f 86 -8.9 -4.47052 | opp_overlap 211578 211606, overlap 211576 ATTAAATAAAAAATA CTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 259 211676 - 211652 - f 71 -8 -3.93061 | gap 1, opp_overlap 211659 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 260 212230 - 212218 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 261 214719 - 214698 - f 74 -8.7 -3.91196 | opp_overlap 214715 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 262 214993 - 215012 + F 100 -10 -5.92337 | opp_overlap 214992 214993 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGAGG TTTTTTTTCGTCTGT TERM 263 215885 - 215856 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 215184 - 215924 + | 2,5-diketo-D-gluconate reductase B TERM 264 215935 - 215952 + T 95 -11.3 -4.68593 | ATTAAGCCTCTCTGA CAGCTCC TCCG GGAGCTG TTTTTACATGCTCGC yafC 216835 - 215921 - | putative transcriptional regulator LYSR-type TERM 265 217046 - 217027 - H 82 -11.4 -3.54771 | CCTATAATAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTAATAGAGG TERM 266 217142 - 217118 - g 72 -9.9 -3.28924 | opp_overlap 217117 217113 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 267 217741 - 217764 + G 82 -3.1 -5.18371 | overlap 217735 217736 217741 217739 CGATGATCAGCGCCG TCGGGCG TTTGGTCGCC CGCTCGA TTTTGTTTTCTACCG yafD 217076 - 217876 + | hypothetical protein TERM 268 217928 - 217908 - g 72 -9.7 -3.27498 | opp_overlap 217881, overlap 217881 CACAGGGCAGACCAA CGTTTGGCG CTG CGCAAAACG TGAGCGCGGTGGTGG yafE 217880 - 218503 + | putative biotin synthesis protein TERM 269 218502 - 218542 + T 93 -15 -3.05997 | opp_overlap 218512, overlap 218512 CGCATAAAGCGGCAT AAATAAAAAAGGCACCGG GGGAA TCGGTGCCTTTTTTATTA TCTGGTTTGTCAGGA TERM 270 218512 - 218532 + T 100 -10.4 -5.60689 | opp_overlap 218512, overlap 218502 GGCATAAATAAAAAA GGCACCGG GGGAA TCGGTGCC TTTTTTATTATCTGG TERM 271 218532 - 218512 - T 100 -9.7 -5.72622 | opp_overlap 218512 218502 GGCATAAATAAAAAA GGCACCG GGGGAAT CGGTGCC TTTTTTATTATCTGG dniR 219910 - 218552 - | membrane-bound lytic murein transglycosylase D TERM 272 219251 - 219288 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 219260, overlap 219260 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 273 219260 - 219280 + g 70 -4.6 -4.46669 | opp_overlap 219260, overlap 219251 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 220737 - 219982 - | hydroxyacylglutathione hydrolase TERM 274 220363 - 220351 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT yafS 220768 - 221493 + | hypothetical protein rnhA 221957 - 221490 - | ribonuclease H dnaQ 222022 - 222753 + | DNA polymerase III subunit epsilon TERM 275 222991 - 223015 + T 91 -7.9 -5.22039 | opp_overlap 222982 222992, overlap 222992 AAATGAGTTCAGAGA ACCGCAAGATT TTT AATTTTGCGGC TTTTTTGCATTTAAA TERM 276 222992 - 223014 + T 86 -11.4 -3.72139 | opp_overlap 222992, overlap 222991 AATGAGTTCAGAGAA CCGCAAGATT TTT AATTTTGCGG CTTTTTTGCATTTAA TERM 277 223014 - 222992 - T 72 -9.2 -3.51137 | opp_overlap 222992 222991 AATGAGTTCAGAGAA CCGCAAGATT TTT AATTTTGCGG CTTTTTTGCATTTAA SBO_0206 223275 - 223060 - | putative IS1 encoded protein insB 223350 - 223853 + | IS1 ORF2 yafV 224743 - 223973 - | hypothetical protein TERM 278 224456 - 224436 - G 74 -3.1 -4.91109 | overlap 224440 CGCTTATCATAAAAA TGTACCGTG CCG CCCGGCTCA ACCAGCAAAAAGCGG ykfE 224897 - 225370 + | vertebrate C-lysozyme inhibitor TERM 279 225387 - 225404 + T 93 -12.7 -3.73068 | opp_overlap 225387 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG TERM 280 225404 - 225387 - T 100 -12.7 -4.56367 | opp_overlap 225387 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG SBO_0210 227538 - 227356 - | putative IS1 encoded protein insB 227613 - 228116 + | IS1 ORF2 TERM 281 229111 - 229092 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 229092 229093, overlap 229093 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCTATTTCTGACG gmhA 228874 - 229452 + | phosphoheptose isomerase TERM 282 229463 - 229495 + F 73 -9.8 -3.34043 | gap 1, opp_overlap 229454 229473 229474, overlap 229463 229474 AGTAAGTCTGGCGTA G-GCCGGATAAGGCG TTTA CGCCGCATCCGGCAC TTGTGCGCTGATGCC TERM 283 230385 - 230364 - g 74 -8.7 -3.91084 | opp_overlap 230379 TGACGGGCAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGCGCTTATT yafJ 229658 - 230425 + | putative amidotransferase yafK 231136 - 230396 - | hypothetical protein insB 231857 - 231354 - | IS1 ORF2 SBO_0217 231981 - 232127 + | putative IS1 encoded protein SBO_0219 233512 - 232625 - | IS629 ORF2 TERM 284 233192 - 233204 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_0220 233787 - 233512 - | IS629 ORF1 SBO_0221 234210 - 233890 - | hypothetical protein TERM 285 234273 - 234309 + H 70 -2.1 -5.00616 | opp_overlap 234264 234263 GAATATCCCAGCCAT TCGCCGGGCGTTCCTGA TAA TCCTCAATATCCGGCGA TTTTTTCCAGCCAGA TERM 286 234766 - 234736 - H 89 -9 -4.58395 | opp_overlap 234736 CTGACTGCTTAAAAA TGTCCCGGCATTTG CGG CAAACGACGCGACA TTTTTCTCCACGTTA TERM 287 234736 - 234766 + H 82 -6.8 -4.8543 | opp_overlap 234736 CTGACTGCTTAAAAA TGTCCCGGCATTTG CGG CAAACGACGCGACA TTTTTCTCCACGTTA TERM 288 235066 - 235052 - H 88 -8.5 -4.82901 | opp_overlap 235052 235065 235065 TGCTTGTCAGAAAAA CCGGG GATTT CCCGG TTTCCTTTTCCGCAG TERM 289 235052 - 235066 + H 83 -9.2 -4.19735 | opp_overlap 235052, overlap 235065 235065 TGCTTGTCAGAAAAA CCGGGG ATT TCCCGG TTTCCTTTTCCGCAG TERM 290 235067 - 235090 + H 73 -11.2 -2.73529 | overlap 235065 235065 CCGGGGATTTCCCGG TTTCCTTTTC CGCA GAAAAGGAAA TACCTTTATGTAAGA TERM 291 236032 - 236021 - H 79 -2.2 -5.45726 | TACATGTCAAAAAAA CTGG TTGA CCAA ACTCGTTATTTATAT TERM 292 236048 - 236070 + H 78 -4.8 -5.00616 | opp_overlap 236050, overlap 236050 ACTCGTTATTTATAT AAGGGCACTT ACG AAGTGCGCTC TTTTTTAAAGCGAGG TERM 293 236050 - 236068 + H 73 -7.4 -4.13561 | opp_overlap 236050, overlap 236048 TCGTTATTTATATAA GGGCACTT ACG AAGTGCGC TCTTTTTTAAAGCGA rpmE2 236559 - 236822 + | 50S ribosomal protein L31 type B TERM 294 237014 - 237046 + F 95 -12.3 -4.26344 | opp_overlap 237018 AATAATCAGATCGGA TTAATGTTGGTGT GTTTATA ACACCAACATTAA TTTTCCTGGGGATAT TERM 295 237971 - 237987 + F 75 -9.5 -3.56092 | opp_overlap 237971 AGGAAACTGAATGCA CCTGTAA AAA TTACAGG TTTGGAAAGTAGTGA TERM 296 238444 - 238432 - g 74 -3.3 -4.89838 | TTAAGAAAGATAAAA TCACG GAC CGGGA AATGGAAATTATCCG ykgK 237999 - 238589 + | putative regulator TERM 297 238805 - 238780 - g 91 -7.5 -5.1615 | opp_overlap 238787, overlap 238782 GCAACAGCCAAAAAA GACACCACCAG TAAT CTGGTTGTGAC GTCACTCGGTAGCTT TERM 298 238803 - 238782 - g 78 -8.7 -4.20118 | opp_overlap 238787, overlap 238780 AACAGCCAAAAAAGA CACCACCAG TAAT CTGGTTGTG ACGTCACTCGGTAGC TERM 299 239048 - 239018 - g 91 -7.6 -5.0538 | overlap 239019 CGGCAGTCGAAAAAA CTGGCGATACCG TGATGAT CGATACCGCCAA CGGCGTACTGGGCGG yagZ 238615 - 239250 + | hypothetical protein TERM 300 239267 - 239285 + F 95 -11.7 -4.24342 | CTCTCTGATGTACCA GCAGGGG TAGCC CCCCTGC TTTATTCCTGGACGG yagY 239308 - 239976 + | hypothetical protein SBO_0230 244389 - 243550 - | IS911 ORF2 TERM 301 243958 - 243969 + g 77 -5.8 -4.63218 | opp_overlap 243954 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 302 244310 - 244330 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SBO_0231 245128 - 245841 + | IS600 ORF2 TERM 303 246661 - 246623 - g 79 -9.7 -3.85698 | gap 1 CGTGCTGGTCAGAAA TTATGACAGCAG-CGCCT TCAA AGGCGACCGCTACCACAA CACGAAAAATGGCAT TERM 304 246696 - 246671 - g 83 -6.1 -4.90906 | CCACAACACGAAAAA TGGCATCAACG CCGA CATCGGTGCCA GTACGAACCTGGATG SBO_0232 246357 - 247118 + | hypothetical protein TERM 305 247196 - 247176 - f 91 -11.2 -4.30576 | opp_overlap 247176 TTTCCATCATCAAAA GTCTGTCG GACAT CGACAGAC TTAACTCCCCCGGAT TERM 306 247176 - 247196 + F 78 -11.9 -3.05463 | opp_overlap 247176 TTTCCATCATCAAAA GTCTGTCGG ACA TCGACAGAC TTAACTCCCCCGGAT TERM 307 247266 - 247252 - f 80 -7.2 -4.57581 | overlap 247259 247260 ACCGGAAACAACAAA GATCAA ATT TTGATC GCAAAGGTCAAAATA TERM 308 248151 - 248169 + G 78 -5.3 -4.80882 | CAAAACTATAATCCC GACTTGT TAAGC GCAAGTC TTTTTAATCTGGACT sigA 247479 - 251336 + | serine protease TERM 309 251346 - 251363 + T 100 -14.1 -3.78934 | opp_overlap 251340 251342 251343, overlap 251343 TTCTGATAACAGCCC GGGCCGC GTTT GCGGCCC TTCTTCTACCGGAGA insB 252401 - 252006 - | IS1 ORF2 SBO_0235 252590 - 252865 + | IS629 ORF1 TERM 310 253185 - 253173 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_0236 252865 - 253752 + | IS629 ORF2 SBO_0237 253816 - 254829 + | putative protein encoded within IS SBO_0238 254842 - 255408 + | putative protein encoded within IS TERM 311 255405 - 255438 + F 73 -4 -4.83169 | gap 2, opp_overlap 255406, overlap 255406 255409 AGCACTCACCAATAA ATAAGCGTCAATACGG TGCT CCGT-T-GACGCTTAC TTTTTATCCGGCACT TERM 312 255437 - 255406 - f 76 -7.5 -4.258 | gap 2, opp_overlap 255405 255406 255409 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CTTTTTATCCGGCAC SBO_0239 255428 - 255811 + | hypothetical protein SBO_0240 256986 - 255790 - | ISSfl2 ORF TERM 313 255843 - 255815 - G 71 -3.2 -4.82901 | TGCGGGGTATAAAAA GTCCCG-TCGCGCA TCA TG-GCGAACAGAAC GTCGCAGCGTCGTCT TERM 314 256823 - 256848 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 256803, overlap 256809 256824 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 315 257580 - 257555 - g 82 -3.1 -5.26875 | overlap 257556 TTGCGAACGAAAAAA CGCTCCACTCG CTGG CGCATGGGGCA GGGCGTAAATGGGGG SBO_0241 257263 - 257832 + | hypothetical protein prfH 257943 - 258443 + | peptide chain release factor-like protein TERM 316 258487 - 258456 - T 100 -17.3 -3.86776 | TAATGAAGGATGAAA CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG CAAATCAAATAATTA pepD 259957 - 258500 - | aminoacyl-histidine dipeptidase TERM 317 258619 - 258640 + g 71 -2.2 -5.00616 | opp_overlap 258619 TTGGCCCGATAGAAA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGACC TERM 318 259522 - 259565 + g 72 -7.3 -4.25104 | opp_overlap 259506 CGTCCATACCGGCTT CTTCGGTCATGGTCAGCAG CACTTC CAGCGGACCGTGACCCACG TTTTCGTCAGCCAGA TERM 319 259938 - 259915 - G 90 -9 -4.57837 | gap 1, opp_overlap 259917 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG gpt 260218 - 260676 + | xanthine-guanine phosphoribosyltransferase TERM 320 260680 - 260710 + F 84 -7.4 -4.74103 | overlap 260683 TCCGGTCGCTAATCT TTTCAACGCCTGGC ACT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 321 260683 - 260707 + F 100 -17.9 -4.47888 | overlap 260680 GGTCGCTAATCTTTT CAACGCCTGGC ACT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 322 261293 - 261316 + G 72 -4.4 -4.70659 | overlap 261294 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 260768 - 262012 + | fermentation/respiration switch protein crl 262070 - 262471 + | DNA-binding transcriptional regulator Crl TERM 323 262503 - 262478 - T 72 -9.1 -3.64822 | gap 1, opp_overlap 262479, overlap 262479 ACGGCGTGAGTGAAA TGTGCCGGATGC ATC ACATCCGGCA-A TATCTATTAAAACTG TERM 324 262479 - 262503 + T 70 -10 -3.09749 | opp_overlap 262478 262479 CGGCGTGAGTGAAAT GTGCCGGATG CATCA CATCCGGCAA TATCTATTAAAACTG TERM 325 262503 - 262479 - T 72 -10.7 -2.78679 | opp_overlap 262479, overlap 262478 CGGCGTGAGTGAAAT GTGCCGGATGC ATC ACATCCGGCAA TATCTATTAAAACTG phoE 263565 - 262510 - | outer membrane phosphoporin protein E TERM 326 263107 - 263127 + g 76 -9 -3.79519 | gap 1 GTCGGTGTTCCGATA CGTCGCCAG ACCG CTGGCG-CG TTTGGTCATAAAGTT TERM 327 263272 - 263282 + g 79 -2.4 -5.21709 | TTTCAACCCGGCAAA AGCG AGA CGCG TTTTTTGCTGTGCAG proB 263853 - 264956 + | gamma-glutamyl kinase proA 264968 - 266221 + | gamma-glutamyl phosphate reductase TERM 328 266282 - 266228 - T 88 -8.4 -4.86731 | opp_overlap 266228 266281 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 329 266228 - 266282 + T 72 -8.4 -3.69437 | opp_overlap 266228, overlap 266281 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG SBO_0251 267589 - 266426 - | putative phage integrase TERM 330 267246 - 267261 + g 70 -4.7 -4.48221 | TTCCAGTTTTCCTCA TGACG CCGGTT CGTCA TTTTCTGCATTGCTG SBO_0252 268936 - 268049 - | IS629 ORF2 TERM 331 268616 - 268628 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_0253 269433 - 268936 - | IS629 ORF1 TERM 332 269354 - 269374 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG ymfL 270444 - 269875 - | hypothetical protein TERM 333 269917 - 269946 + g 73 -11.5 -2.76265 | gap 1, opp_overlap 269908 269911, overlap 269916 269912 269919 AGCAATCGACGCCAC GACGCCCG-GAG CTGCACA CTCGCGGGCGTC ATTACTTTCTGAAAT SBO_0256 270979 - 270476 - | hypothetical protein TERM 334 270552 - 270568 + gH 88 -5.1 -5.25803 | opp_overlap 270565 TGCTCAAGTTTTTTA GCCAG CACAAAA CTGGC TTTTTTATAGCCATT TERM 335 270729 - 270753 + gH 72 -5 -4.62957 | opp_overlap 270731, overlap 270724 270730 270731 AATGAACCTTCAAGA TACTTGTACC TTAGC GGTACAAGGG TTTTAATTTCGTTAT TERM 336 270751 - 270731 - GH 70 -9.8 -3.08867 | opp_overlap 270724 270731 270730 270729 TGAACCTTCAAGATA CTTGTACC TTAGC GGTACAAG GGTTTTAATTTCGTT SBO_0255 270767 - 271441 + | putative phage repressor TERM 337 271456 - 271469 + Tr 100 -8.1 -5.71983 | opp_overlap 271456 ATCAATATTTATGAA CCTGC TTCG GCAGG TTTTTTTATACTTGA TERM 338 271610 - 271598 - TR 80 -6.9 -4.71426 | overlap 271593 TCGTTAGCAACAAAA CGCCC ATA GGACG CTTCGCTCTTTAACA TERM 339 272537 - 272555 + Tr 88 -14.6 -3.08706 | opp_overlap 272532 272540, overlap 272540 CATTAAAACACTTTA GAACCCGC TGG GCGGGTTC TATTCAAATATACTT TERM 340 272552 - 272540 - TR 77 -10.5 -3.39289 | opp_overlap 272537 272540, overlap 272532 TAAAACACTTTAGAA CCCGC TGG GCGGG TTCTATTCAAATATA TERM 341 272540 - 272552 + Tr 83 -10.5 -3.68325 | opp_overlap 272540 272532, overlap 272537 TAAAACACTTTAGAA CCCGC TGG GCGGG TTCTATTCAAATATA SBO_0257 272847 - 272644 - | putative IS1 encoded protein insB 272922 - 273425 + | IS1 ORF2 tauA 273524 - 274486 + | taurine transporter substrate binding subunit TERM 342 274827 - 274806 - g 77 -5.9 -4.61868 | gap 1, overlap 274810 CAGGTATAGAGAAAA TGCAGCGACT GGA AATCGC-GCA CCAGGTGCTGAAAAA TERM 343 274904 - 274945 + G 84 -10.8 -3.71848 | GGTGGTCAACGTCAG CGGGTGGGGATTGCCCGC GCGCTG GCGGCGAATCCCCAGCTG TTATTACTCGACGAA tauB 274499 - 275266 + | taurine transporter ATP-binding subunit TERM 344 275924 - 275936 + G 84 -10.5 -3.74749 | CGGCGGAGCTGATTG CCGCG ACG CGCGG TTTAGGATTTATGGT TERM 345 275991 - 276021 + G 95 -10.4 -4.65933 | overlap 275996 GACTGACGTGGTGCT GGCGGGAATCGCGG TGA TTGCGATTATCGCC TTTCTTTTAGAACTG tauC 275263 - 276072 + | taurine transporter subunit TERM 346 276262 - 276274 + G 81 -9.1 -4.08767 | opp_overlap 276237 CGCAGCAGCAACGCG CGCTG GCC CAGCG TTTTGGCGAACTGCA TERM 347 276744 - 276755 + G 86 -5.8 -5.06816 | opp_overlap 276744 GAGAAAGAGAGCGAA GCCT TGTT AGGC TTTTTATTCGCCCAT tauD 276087 - 276938 + | taurine dioxygenase hemB 278051 - 277044 - | delta-aminolevulinic acid dehydratase insB 278935 - 278432 - | IS1 ORF2 SBO_0265 279010 - 279240 + | putative IS1 encoded protein SBO_0266 279465 - 279830 + | insertion sequence 2 OrfA protein SBO_0267 279788 - 280693 + | insertion element IS2 transposase InsD SBO_0268 281561 - 280722 - | IS911 ORF2 TERM 348 281130 - 281141 + g 77 -5.8 -4.63218 | opp_overlap 281126 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 349 281482 - 281502 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 350 282034 - 282016 - H 70 -9.6 -2.94099 | opp_overlap 282004 282016 CTCTGGTATCAGATA CCATTGGT TTA ACCAACGG TTCTTCACTGAATAT yaiU 282183 - 283589 + | putative flagellin structural protein TERM 351 283659 - 283630 - f 100 -18.1 -3.78409 | opp_overlap 283633, overlap 283633 GTAATTTAATCTAAA TAATGCCCGTCAA GGAT TTGACGGGCATTA CTGCAAAGGACGCGC TERM 352 283633 - 283656 + G 100 -15.4 -3.14132 | opp_overlap 283630 283633 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 353 283656 - 283633 - g 100 -15.4 -4.01381 | opp_overlap 283633, overlap 283630 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG yaiV 283632 - 284300 + | putative DNA-binding transcriptional regulator yaiH 285458 - 284301 - | beta-lactamase/D-alanine carboxypeptidase sbmA 285810 - 287030 + | transport protein yaiW 287043 - 288137 + | hypothetical protein SBO_0274 288504 - 288196 - | hypothetical protein TERM 354 288277 - 288265 - G 81 -6.2 -4.7373 | GCAGCCTACTAAAAA CGGG ATCAG CCCG AAAATGGTGCCGACA TERM 355 288446 - 288418 - G 77 -8.2 -4.13711 | gap 1, overlap 288421 GCAAAACAGCACAAA CAACGCATAGGCA ATGT TGCC-AGGCGTTG AAGAGGCATTGCGAT SBO_0275 288632 - 288976 + | hypothetical protein TERM 356 288991 - 288967 - T 93 -10.8 -4.42851 | TGAAGAAACTGAAAA CGCCCAATAA GAATA TTATCGGGCG TTAAAATATTACATT ddl 290094 - 289000 - | D-alanyl-alanine synthetase A TERM 357 289199 - 289186 - G 70 -4.5 -4.56597 | CTCTGGGGTTAAAAA CACGT CTAC ACGCG CCATGCCTGCGCATC TERM 358 289984 - 289994 + g 75 -6.8 -4.42653 | opp_overlap 289983 289984 GCCCAGCAGCACAAC GTCG AAG CGAC TTTTATCAATGGCAT yaiB 290556 - 290816 + | hypothetical protein TERM 359 290859 - 290873 + G 84 -4.2 -5.21459 | overlap 290850 290861 AAAGTTGTCACGGCC GAGACT TAT AGTCGC TTTGTTTTTATTTTT TERM 360 291039 - 291053 + G 71 -9.2 -3.56092 | CGATATTACTGCACC CGGCGG TGC TCGCCG TTTAACGGGTGATCA TERM 361 291160 - 291192 + G 77 -3.3 -5.04385 | GATTCGGAAATTACA GCCGCACGTAATT ATGCCGA AGGTGCGGGCGGC TTTTTTAAAGGTATC TERM 362 291271 - 291260 - g 100 -7.2 -5.7946 | CGCTGAATAAAAAAA CCGG CAAA CCGG ACTACGTCACCGATT phoA 290848 - 292332 + | alkaline phosphatase TERM 363 292369 - 292335 - f 80 -6.3 -4.86731 | gap 1, opp_overlap 292337 292338 292368, overlap 292330 292336 292337 GGGGCTGAAATAAAA CCGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-GT TTTTTTGCTGTTAGC TERM 364 292368 - 292336 - f 75 -9.8 -3.51557 | gap 1, opp_overlap 292337 292338, overlap 292335 292330 292337 GGGCTGAAATAAAAC CGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-G TTTTTTTGCTGTTAG TERM 365 292337 - 292368 + F 100 -14.4 -5.63374 | opp_overlap 292336 292335 292330 292337, overlap 292338 GGCTGAAATAAAACC GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG TTTTTTTGCTGTTAG TERM 366 292338 - 292367 + F 100 -17.9 -3.96398 | opp_overlap 292336 292337 292335 292330, overlap 292337 GCTGAAATAAAACCG CGCCCGGCAGTGA ATTT TCGCTGCCGGGTG GTTTTTTTGCTGTTA psiF 292433 - 292771 + | hypothetical protein TERM 367 292785 - 292818 + F 95 -11.7 -3.86944 | GATACCTGATAGTGC TAACGGGTGAGCTAC GAAA GTGGCTCACCCGAAA TTTCATACTTCTGCC TERM 368 293274 - 293296 + G 86 -12.7 -3.5241 | overlap 293282 293287 293289 TATGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 369 293282 - 293298 + G 81 -10.1 -3.87373 | overlap 293274 293287 293289 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG TERM 370 293996 - 293956 - g 70 -4.1 -4.65182 | gap 3, overlap 293967 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCAGGC GAAAGTCATCAGGAT yaiC 292873 - 293988 + | diguanylate cyclase AdrA proC 294814 - 294005 - | pyrroline-5-carboxylate reductase yaiI 294934 - 295392 + | hypothetical protein TERM 371 295458 - 295474 + F 89 -5.9 -5.64421 | GGGATGTATTGAGAT TTTCACT TTA AGTGGAA TTTTTTCTTTACAAT TERM 372 295815 - 295759 - g 74 -7.8 -4.03234 | opp_overlap 295759 295760, overlap 295760 TTCGCGCCAGAGAAA CGGCGGCGCTGGAAGCGGTAACTGCG CCATC CACAGTTATCGCTACAGGCGGCGGCA TTATTCTGACGGAAT TERM 373 295760 - 295814 + G 75 -11.3 -2.87146 | opp_overlap 295760 295759, overlap 295759 TCGCGCCAGAGAAAC GGCGGCGCTGGAAGCGGTAACTGCG CCATC CACAGTTATCGCTACAGGCGGCGGC ATTATTCTGACGGAA aroL 295575 - 296099 + | shikimate kinase II yaiA 296149 - 296340 + | hypothetical protein aroM 296598 - 297275 + | hypothetical protein yaiE 297347 - 297631 + | hypothetical protein TERM 374 297637 - 297661 + F 80 -6.3 -4.8667 | overlap 297638 297653 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATATC TERM 375 297638 - 297660 + F 75 -9.8 -3.51279 | overlap 297637 297653 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATAT SBO_0287 297839 - 298120 + | hypothetical protein rdgC 299189 - 298278 - | recombination associated protein TERM 376 298739 - 298751 + g 77 -3.3 -5.03314 | overlap 298724 TACGCAGCAGTGCCA GCGTA TCT TCCGC TTTTTTGGCACTGGC TERM 377 300270 - 300228 - R 85 -5.5 -5.30189 | gap 1, opp_overlap 300226 300228, overlap 300232 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCCG-CG TCTTATCAGGCCTGC TERM 378 300228 - 300270 + r 71 -9.9 -3.21924 | gap 1, opp_overlap 300228 300232, overlap 300226 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC-GCG TCTTATCAGGCCTGC TERM 379 300267 - 300232 - R 73 -10.4 -2.949 | opp_overlap 300228 300226, overlap 300228 AGAGTAAAAAACGTA GGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC GCGTCTTATCAGGCC araJ 301550 - 300366 - | protein AraJ TERM 380 300590 - 300600 + g 85 -8.2 -4.4648 | CACCTAATAACTCTC CGCC TTT GGCG TTTTGTAGTAACAAT TERM 381 300957 - 300987 + g 81 -9 -4.07246 | TAACCACGGGGCCGG GCTGCGCAAAAAGT GAA ATTGTTCGCGCAGC TTTCCTTTCGCCTCG TERM 382 301084 - 301074 - G 74 -2.4 -5.14163 | AGCGATCAATAAAAA GGTG TAA CGCC AGCTAAATTCCTGAC TERM 383 301146 - 301187 + g 78 -9.4 -3.96337 | gap 1, opp_overlap 301154 301155 301157, overlap 301156 ATTGGCGACTGTCAT CCCGGAAACCATCCCCGCC ACGGC GGCGGTGACT-TTTCCGGG TTTGATAATTTTTGA TERM 384 301242 - 301230 - G 77 -3.3 -5.0538 | overlap 301231 301232 GCCGACGCCAAAAAA TGCGC CAT GCGGA AAGCCGGATACCAGC sbcC 304819 - 301676 - | exonuclease subunit SbcC TERM 385 302026 - 302040 + g 73 -11.4 -2.77962 | overlap 302025 CAACAACCTCGACTT CCAGCG CCT CGCTGG CTTTGCGCTGTAACA TERM 386 303330 - 303345 + g 85 -10.4 -4.25848 | GCCTGTAACTGTGCA CGCTGG GCTT CCAGCG TTTTGATGCGCGCTT TERM 387 303973 - 303994 + g 87 -5 -5.29445 | GTTGTGCCAGACTGA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 306018 - 304816 - | exonuclease subunit SbcD TERM 388 305425 - 305441 + g 70 -6.5 -4.25104 | opp_overlap 305424 305420 305425, overlap 305403 CGTGCCAATATAAAT GTCACGC ACG GCGTCAC TTTTACTGGCACCCA phoB 306208 - 306897 + | transcriptional regulator PhoB TERM 389 307006 - 307032 + G 82 -2.8 -5.28481 | overlap 307020 GAGCTGCTACTTTGT TGCCTCCCGGCT TTC ATCCTGGGTGCA TTTTTTGGTTACCTG phoR 306955 - 308250 + | phosphate regulon sensor protein TERM 390 308277 - 308298 + F 100 -9.5 -4.88918 | opp_overlap 308280 CATCTTTTATTGCCA TAAGCCAGT CGAT GCTGGCTTA TTTTCTTTGCAGTCA TERM 391 308930 - 308942 + G 72 -6.9 -4.18018 | ACGGTTTGTTACTTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 308657 - 309976 + | branched chain amino acid transport system II carrier protein TERM 392 309998 - 310021 + F 100 -15.3 -5.64304 | opp_overlap 310001 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 310052 - 311425 + | putative proline-specific permease TERM 393 311442 - 311470 + T 88 -14.6 -3.03338 | overlap 311432 CCTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT TERM 394 311794 - 311740 - T 73 -11.3 -2.65884 | gap 1, opp_overlap 311774, overlap 311739 311742 GTACCAATGCATAAG CAGC-GCAGTCAGCCGCAGCCAGGCG TCAC CGCAGGGCTTCAGCCGAATGCCGCCG GCACGACTGGAGCAG TERM 395 311792 - 311742 - T 72 -10.3 -2.86806 | gap 1, opp_overlap 311774, overlap 311740 311739 ACCAATGCATAAGCA GC-GCAGTCAGCCGCAGCCAGGCG TCAC CGCAGGGCTTCAGCCGAATGCCGC CGGCACGACTGGAGC yajB 313889 - 313308 - | acyl carrier protein phosphodiesterase TERM 396 314295 - 314279 - g 74 -10.1 -3.53091 | overlap 314288 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGCTGCTGGG TERM 397 314518 - 314498 - g 72 -4.6 -4.70659 | gap 1, opp_overlap 314504 314509, overlap 314499 314500 GTTTATAGCGAAAAA CCGGGC-GC GGTT GCAGCCCCG ACCGCTGGTCTGCAT TERM 398 314509 - 314532 + G 70 -6.6 -4.0896 | opp_overlap 314500 314498 314499, overlap 314504 314518 AAAACCGGGCGCGGT TGCAGCCCCG ACCG CTGGTCTGCA TTTTGACGAGCCTTT queA 313982 - 315052 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 399 315171 - 315187 + G 70 -5.1 -4.33785 | overlap 315168 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 315108 - 316235 + | queuine tRNA-ribosyltransferase yajC 316258 - 316590 + | preprotein translocase subunit YajC TERM 400 317712 - 317697 - g 71 -9 -3.54029 | CTTCACTAAGGACAA CATCGG CAAA CCGATG GCAACCCTGTTTGTG secD 316618 - 318465 + | preprotein translocase subunit SecD secF 318476 - 319447 + | preprotein translocase subunit SecF TERM 401 319472 - 319491 + F 100 -10 -5.92337 | opp_overlap 319472 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT TERM 402 319491 - 319472 - f 73 -7.8 -4.11216 | opp_overlap 319472 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT yajD 319576 - 319923 + | hypothetical protein TERM 403 320070 - 320090 + T 95 -12.6 -4.30576 | opp_overlap 320070 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA TERM 404 320090 - 320070 - T 95 -12.6 -4.14257 | opp_overlap 320070 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA tsx 320984 - 320100 - | Tsx yajI 321822 - 321283 - | hypothetical protein TERM 405 321715 - 321730 + g 71 -9 -3.53018 | overlap 321699 321713 CGTCATCTCCTGGTT CAGCGT GCTG ACGCTG TGTTTCATCTGTCGC ybaD 321973 - 322422 + | transcriptional regulator NrdR ribD 322426 - 323529 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 406 324042 - 324026 - g 70 -6.5 -4.17132 | overlap 324027 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACCGCGCTTGAAAT ribH 323618 - 324088 + | riboflavin synthase subunit beta TERM 407 324242 - 324231 - g 70 -5.8 -4.23723 | opp_overlap 324219 324216, overlap 324221 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 408 324379 - 324354 - g 76 -3.9 -4.89852 | gap 1, overlap 324355 324357 GGACAGGTAGAAAAA GCAGTACTGCGC ATT GCGCTGTAC-GA ACTGTCTAAACGTAG TERM 409 324377 - 324357 - g 76 -11.1 -3.32986 | overlap 324355 324354 CAGGTAGAAAAAGCA GTACTGCGC ATT GCGCTGTAC GAACTGTCTAAACGT nusB 324108 - 324527 + | transcription antitermination protein NusB TERM 410 324534 - 324574 + F 95 -7.7 -5.43553 | gap 2 AAAAAGTAATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCATG-ATC-GCCGGCC TTTTCTTTTTTACCT TERM 411 325311 - 325324 + G 70 -4.5 -4.47328 | overlap 325312 GCGTACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT thiL 324605 - 325582 + | thiamine monophosphate kinase pgpA 325560 - 326078 + | phosphatidylglycerophosphatase A TERM 412 326086 - 326128 + T 71 -10.5 -2.73829 | overlap 326085 326083 TGTCGTAGTTGTGCA CCGATGCCTGATGTGACGC TTGTT GCGTCTCATCAGGCCTGGA CTCTTATTTAAATCC yajO 327106 - 326132 - | putative NAD(P)H-dependent xylose reductase TERM 413 326580 - 326590 + g 81 -6.8 -4.66833 | CTGACAAACTGCGCC CAGC CGT GCTG TTTTTGGAGTTCCAG dxs 329023 - 327161 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 414 327334 - 327347 + g 78 -5.2 -4.78237 | CTCCGCTGCCTGCAC CGCC CATAAT GGCG TTTTCTTCTACGGTA TERM 415 327457 - 327471 + g 73 -11.4 -2.59564 | overlap 327456 TGGCGTTCAGCGATT CGGCGA CTT TCGCCG CTTCTGGCATCAGCG ispA 329947 - 329048 - | geranyltranstransferase xseB 330189 - 329947 - | exodeoxyribonuclease VII small subunit TERM 416 330578 - 330568 - g 77 -6.8 -4.55826 | opp_overlap 330567, overlap 330571 TGCAAAAGATGAAAA CCAG CGT CTGG CTATTCGCGACGCCC yajK 330395 - 331843 + | thiamine biosynthesis protein ThiI thiJ 332493 - 331897 - | hypothetical protein apbA 333361 - 332450 - | 2-dehydropantoate 2-reductase TERM 417 333455 - 333401 - H 88 -12.5 -3.61398 | gap 2, opp_overlap 333398 333443 333447 333452, overlap 333402 333450 CCGGGTGTTCAATAA GGC-TATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATACGTC CTGGTGCAGGACTGT TERM 418 333452 - 333402 - H 84 -13.7 -2.76696 | opp_overlap 333398 333443 333447, overlap 333401 333450 CGGGTGTTCAATAAG GCTATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATA-C GTCCTGGTGCAGGAC yajQ 333529 - 334020 + | nucleotide-binding protein yajR 335518 - 334148 - | putative transport protein TERM 419 335342 - 335326 - G 77 -6.5 -4.67234 | overlap 335327 ACGGAATCTGAAAAA CGGCCTG AGT CAGACCA TAAATACCAATGGCA TERM 420 335441 - 335429 - G 74 -7.7 -4.1021 | overlap 335431 CGGCAGAACCATAAA CATGC CCA GCATG CGCAACGAGAATACG TERM 421 335627 - 335640 + r 84 -8.1 -4.72272 | opp_overlap 335627, overlap 335639 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG TERM 422 335640 - 335627 - R 100 -8.1 -5.4756 | opp_overlap 335627 335639 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG cyoE 336551 - 335661 - | protoheme IX farnesyltransferase TERM 423 336472 - 336452 - G 74 -9.7 -3.45386 | overlap 336440 ACAGGGGATAATCAA TGCTGCCCT TTG AGGCCAGCA GGAATCCCCCAATCA cyoD 336892 - 336563 - | cytochrome o ubiquinol oxidase subunit IV cyoC 337506 - 336892 - | cytochrome o ubiquinol oxidase subunit III TERM 424 337218 - 337190 - G 72 -5.2 -4.49556 | opp_overlap 337203 CCGGCACCAAACAAA CAGGTCAACGCC AGCCA GGAGATAACCTG GCTTTTGTTGTTTTT TERM 425 337203 - 337220 + g 100 -8.4 -5.18715 | opp_overlap 337190 AACAGGTCAACGCCA GCCAGG AGATAA CCTGGC TTTTGTTGTTTTTGT cyoB 339487 - 337496 - | cytochrome o ubiquinol oxidase subunit I TERM 426 337533 - 337560 + g 76 -9.2 -3.85698 | opp_overlap 337540, overlap 337541 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 427 337541 - 337552 + g 81 -5.8 -4.84529 | opp_overlap 337540, overlap 337533 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC cyoA 340456 - 339509 - | cytochrome o ubiquinol oxidase subunit II TERM 428 340860 - 340906 + r 77 -10.5 -3.38314 | overlap 340859 AAGCGATACTGATGT TTATTTAGCCGTAATAATTAC GGCGA GTGATTACTACAGCTAAATAA TATTTACAGATTACG ampG 342392 - 340917 - | muropeptide transporter TERM 429 341544 - 341516 - G 72 -11 -3.1012 | overlap 341504 341514 341513 AAATGCCGAAAATCA GCAGCGCCCG GAACAGCGA CAGGCGCTGC ATCAAAATCCCACCG TERM 430 342053 - 342040 - G 72 -4.5 -4.72986 | GAGGCCGAGCAAAAA GCGAT CACC ACCGC CAGTGCCGCCATCCA TERM 431 342231 - 342215 - G 71 -2.9 -4.76892 | overlap 342216 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGAGAGAAGAAACCA yajG 343014 - 342436 - | hypothetical protein bolA 343319 - 343636 + | transcriptional regulator BolA TERM 432 343690 - 343713 + F 93 -9.6 -4.59984 | opp_overlap 343683 343695, overlap 343695 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 433 343695 - 343708 + F 100 -9.5 -5.23292 | opp_overlap 343695, overlap 343690 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 434 343708 - 343695 - f 100 -9.5 -4.74132 | opp_overlap 343690 343695 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 435 343795 - 343780 - f 85 -6.8 -5.055 | overlap 343782 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 436 343793 - 343782 - f 71 -7.2 -4.15235 | overlap 343780 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG tig 343980 - 345278 + | trigger factor TERM 437 345313 - 345336 + F 100 -12.4 -5.9873 | opp_overlap 345313 345312 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA TERM 438 345849 - 345865 + G 70 -5 -4.44667 | ATCTGTATGGGCCAG GCGGCC TCGAT GGGCGC TTTCTTGTTGACCGC clpP 345525 - 346148 + | ATP-dependent Clp protease proteolytic subunit clpX 346274 - 347548 + | ATP-dependent protease ATP-binding subunit TERM 439 347577 - 347605 + F 80 -6.7 -4.88711 | opp_overlap 347582, overlap 347582 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 440 347600 - 347582 - f 93 -8.8 -4.88407 | opp_overlap 347577 347582 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 441 347582 - 347600 + F 91 -11 -4.3623 | opp_overlap 347582, overlap 347577 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 442 348682 - 348669 - g 77 -3.1 -5.10029 | gap 1, overlap 348659 348671 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 443 348687 - 348671 - g 82 -9.4 -4.17355 | overlap 348659 348669 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 444 349029 - 349018 - g 70 -4.4 -4.45485 | opp_overlap 349011 ATGAGATCGACAAAA TGTC TTCT GACA TGCGAGGCGATCCGG TERM 445 349731 - 349719 - g 75 -5.5 -4.72986 | GATTTTTACGAAAAA CGTGA CAT CCACG TCCACGTACCGGAAG lon 347736 - 350090 + | DNA-binding ATP-dependent protease La TERM 446 350155 - 350120 - f 79 -4.6 -5.14163 | opp_overlap 350123, overlap 350122 350123 ATGCACTAATAAAAA CAGGGCTGGCAGGC TAATTCGG GCTTGCCAGCCTTT TTTTGTCTCGCTAAG TERM 447 350153 - 350122 - f 74 -7.2 -4.19587 | opp_overlap 350123, overlap 350120 350123 GCACTAATAAAAACA GGGCTGGCAGGC TAATTCGG GCTTGCCAGCCT TTTTTTGTCTCGCTA TERM 448 350152 - 350123 - f 73 -10.7 -3.10668 | opp_overlap 350123, overlap 350122 350120 CACTAATAAAAACAG GGCTGGCAGGC TAATTCGG GCTTGCCAGCC TTTTTTTGTCTCGCT TERM 449 350123 - 350152 + F 100 -13.6 -5.72616 | opp_overlap 350123 350122 350120 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT hupB 350299 - 350571 + | transcriptional regulator HU subunit beta TERM 450 350607 - 350626 + F 100 -10 -5.7827 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT TERM 451 352552 - 352521 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ybaU 350763 - 352634 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 452 352677 - 352704 + F 72 -10.6 -2.93447 | opp_overlap 352678 352683, overlap 352683 GTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 453 352703 - 352678 - f 86 -11.9 -3.63515 | opp_overlap 352677 352683, overlap 352683 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 454 352698 - 352683 - f 78 -6 -4.89477 | opp_overlap 352677 352683, overlap 352678 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 455 352683 - 352698 + F 81 -8.2 -4.39571 | opp_overlap 352683 352678, overlap 352677 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA ybaV 352785 - 353156 + | hypothetical protein TERM 456 353162 - 353175 + F 70 -2.4 -5.0133 | opp_overlap 353162 AACCCTGTAATTAAT TTGC ATAGTG GCAA TTTTTTGCCAGACTG TERM 457 353215 - 353193 - f 74 -10.7 -3.12351 | opp_overlap 353188 353193 353195 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC TERM 458 353193 - 353215 + F 73 -10.7 -2.96274 | opp_overlap 353193, overlap 353188 353195 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC ybaW 353250 - 353648 + | hypothetical protein ybaX 354395 - 353700 - | queuosine biosynthesis protein QueC TERM 459 354435 - 354421 - R 88 -8.6 -4.89477 | GCTTGAACAATAAAA GCGTTA TGG TAACGC CTGCGATTAACCCGG ybaE 356160 - 354460 - | hypothetical protein TERM 460 354808 - 354826 + g 79 -2.2 -5.1925 | overlap 354809 354810 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 461 356683 - 356672 - g 95 -5.8 -5.44119 | overlap 356673 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 356260 - 357042 + | hypothetical protein TERM 462 357096 - 357111 + F 100 -11.8 -5.86332 | AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTTGCGTTGA TERM 463 357218 - 357204 - g 72 -4.3 -4.6008 | AAAATAGAATTAAAA GAGAA AAAAA TTCTC TGTGGAAGGGCTATG TERM 464 357422 - 357409 - g 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG ybaO 357144 - 357689 + | putative LRP-like transcriptional regulator mdlA 357719 - 359380 + | putative multidrug transporter membrane\ATP-binding components SBO_0343 359485 - 360504 + | putative transposase mdlB 360927 - 362708 + | putative multidrug transporter membrane\ATP-binding components TERM 465 362745 - 362768 + F 89 -8.9 -4.68645 | opp_overlap 362740 362745 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC glnK 362889 - 363227 + | nitrogen regulatory protein P-II 2 TERM 466 363399 - 363412 + G 70 -5.9 -4.15453 | overlap 363410 TGTTTATGACTATTC CGGGG ATTG CCCTG TTTTACGGTGGGTTG amtB 363257 - 364543 + | ammonium transporter TERM 467 364560 - 364586 + T 93 -7.3 -5.68023 | gap 1, opp_overlap 364560 364562, overlap 364562 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 468 364586 - 364560 - T 100 -9.5 -5.07053 | gap 1, opp_overlap 364560 364562, overlap 364562 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 469 364562 - 364584 + T 90 -9.9 -4.46828 | gap 1, opp_overlap 364560 364562, overlap 364560 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT TERM 470 364584 - 364562 - T 83 -9.9 -4.15748 | gap 1, opp_overlap 364562 364560, overlap 364560 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT tesB 365452 - 364592 - | acyl-CoA thioesterase II TERM 471 365482 - 365472 - H 74 -6.8 -4.24342 | overlap 365473 CTCTCCAGTAACAAA GCTG CCG CAGC AAGCCAAAGTGAGTT ybaY 365670 - 366242 + | glycoprotein/polysaccharide metabolism TERM 472 366249 - 366276 + T 90 -15 -2.71364 | opp_overlap 366247 366244 366243, overlap 366253 CAATATTAAGCGACG TTAACCCTCTCC GCCC GGAGAGGGTTAG TAGTTCCAGCGATAA TERM 473 366253 - 366272 + T 86 -13.6 -3.27298 | opp_overlap 366247 366244 366243, overlap 366249 ATTAAGCGACGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG ybaZ 366662 - 366273 - | hypothetical protein TERM 474 366666 - 366656 - G 72 -6.8 -4.16016 | GCATTGCGCAAGAAA CCAG CAT CTGG CACGCGATGGGTTGC ybaA 366963 - 367316 + | hypothetical protein SBO_0351 367515 - 367345 - | putative IS1 encoded protein insB 367608 - 368111 + | IS1 ORF2 ylaB 369630 - 368134 - | hypothetical protein TERM 475 368552 - 368570 + g 80 -5.2 -5.02074 | TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA SBO_0354 370546 - 369641 - | insertion element IS2 transposase InsD SBO_0355 370869 - 370504 - | insertion sequence 2 OrfA protein SBO_0356 371026 - 371313 + | IS600 ORF1 SBO_0357 371468 - 372181 + | IS600 ORF2 ylaD 373229 - 372678 - | maltose O-acetyltransferase hha 373619 - 373401 - | hemolysin expression-modulating protein ybaJ 374019 - 373645 - | hypothetical protein TERM 476 374530 - 374545 + r 79 -11.8 -3.27476 | opp_overlap 374530 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT TERM 477 374545 - 374530 - R 100 -11.8 -5.28176 | opp_overlap 374530 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT acrB 377714 - 374565 - | acridine efflux pump TERM 478 375885 - 375906 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 479 377588 - 377627 + g 100 -15.8 -3.57144 | AGGCGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 378930 - 377737 - | acridine efflux pump TERM 480 378901 - 378919 + g 93 -6 -5.17744 | opp_overlap 378897 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 379072 - 379719 + | DNA-binding transcriptional repressor AcrR TERM 481 380142 - 380129 - g 70 -3.7 -4.62783 | overlap 380112 CAGCTACGGCAAAAA GTCGC TGAA GCGCC GGAAAAAATGCGCCA TERM 482 380663 - 380649 - g 79 -4.2 -5.15969 | CTTTAACTGAAAAAA CGGC GCAGGAA GCCG TCTCCCCGGATGAAG TERM 483 381683 - 381673 - g 72 -8.2 -3.80733 | opp_overlap 381669 GGTACTGGAGAAGAA CGGC GTT GCCG TGCGTCACTTCGGCA aefA 379847 - 383209 + | potassium efflux protein KefA ybaM 383582 - 383421 - | hypothetical protein priC 384123 - 383596 - | primosomal replication protein N'' ybaN 384193 - 384570 + | hypothetical protein apt 384722 - 385273 + | adenine phosphoribosyltransferase TERM 484 385325 - 385349 + F 70 -9.9 -3.09492 | opp_overlap 385274, overlap 385325 385327 385343 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 485 385584 - 385556 - g 72 -5.2 -4.56597 | gap 1 GTGGCGTCGGAAAAA CCTCTATCGCCCG ACTG CTGGCGA-AGGGG CTAAACTGCGAAACC TERM 486 386644 - 386624 - g 74 -10.4 -3.53224 | overlap 386625 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 487 386822 - 386806 - g 75 -4.3 -4.7497 | overlap 386809 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTGAAAAA TERM 488 386819 - 386809 - g 77 -6.8 -4.4831 | overlap 386806 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTGAA TERM 489 386874 - 386858 - g 93 -6.5 -5.27779 | TGGAACATGAAAAAA CGCCG GAACTGG CGGCG AAGCTAGCGGCAGAA TERM 490 387019 - 386977 - g 71 -9.1 -3.56594 | opp_overlap 386986 386992 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 491 387189 - 387172 - g 95 -6.9 -5.17744 | opp_overlap 387169 387172 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 385402 - 387273 + | DNA polymerase III subunits gamma and tau TERM 492 387275 - 387291 + F 77 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC TERM 493 387399 - 387387 - g 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA ybaB 387326 - 387655 + | hypothetical protein TERM 494 387735 - 387691 - g 79 -12.8 -3.07622 | gap 1, overlap 387681 387694 ACACAGCTTATGGAA GCACTGCGCTGTCTGTCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 495 387732 - 387694 - g 95 -15.3 -2.75382 | gap 1, overlap 387691 CAGCTTATGGAAGCA CTGCGCTGTCTGTCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 496 388075 - 388064 - g 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAATC recR 387655 - 388260 + | recombination protein RecR TERM 497 388260 - 388295 + F 72 -10.4 -2.90804 | opp_overlap 388251 388266, overlap 388259 388269 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG ATCA CCTGCTCTCGCTTGAA ATTATTCTCCCTTGT TERM 498 388289 - 388266 - f 100 -16.8 -3.90112 | opp_overlap 388260 388259 388269, overlap 388251 TCGTTTTTAAGCAAA CGAGAGCAGG ATCA CCTGCTCTCG CTTGAAATTATTCTC TERM 499 388269 - 388286 + F 73 -11.3 -2.55818 | opp_overlap 388266, overlap 388260 388259 TTTTTAAGCAAACGA GAGCAGG ATCA CCTGCTC TCGCTTGAAATTATT TERM 500 388831 - 388811 - g 100 -10.5 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAAC GGC GTCTTCTGG GAATCGGCTGGCGAA TERM 501 389496 - 389480 - g 81 -7.3 -4.60487 | overlap 389482 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 502 389494 - 389482 - g 72 -7.7 -3.91506 | overlap 389480 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 388370 - 390244 + | heat shock protein 90 TERM 503 390250 - 390277 + F 100 -15.7 -5.50723 | GGTTTCCTGATGTCA TGCCGGATGAC CTTTGT GTCATCCGGCA TTTTTCTTTTCATCA adk 390425 - 391069 + | adenylate kinase hemH 391201 - 392163 + | ferrochelatase ybaC 393119 - 392160 - | acetyl esterase TERM 504 392188 - 392212 + g 70 -5.7 -4.36411 | gap 1, opp_overlap 392185, overlap 392186 GTAAAGAACTGAGCG CCGTCG-CGA AGAGCC TCGTCGGCGG TTTTCATCATTCGTG TERM 505 394202 - 394181 - g 78 -7.9 -4.37198 | AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG CGCTATAGCGGAATT gsk 393271 - 394575 + | inosine-guanosine kinase TERM 506 394593 - 394624 + T 72 -8.6 -3.71873 | opp_overlap 394603 394604, overlap 394594 394603 394604 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTGGCTCTCGATGC TERM 507 394594 - 394623 + T 77 -12.1 -2.82803 | opp_overlap 394603 394604, overlap 394593 394603 394604 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTGGCTCTCGATG ybaL 396384 - 394708 - | putative cation:proton antiport protein TERM 508 396618 - 396586 - R 87 -10.6 -4.13945 | opp_overlap 396576, overlap 396589 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 509 396615 - 396589 - R 93 -15.3 -3.09831 | opp_overlap 396576, overlap 396586 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT TERM 510 396940 - 396928 - R 83 -10.5 -3.66424 | TAAAATCAGCGTAAA CGGCG CAA CGCCG AGGATAGAGCCCCAA SBO_0379 397262 - 397080 - | putative IS1 encoded protein insB 397355 - 397858 + | IS1 ORF2 TERM 511 398585 - 398600 + F 74 -6.8 -4.23045 | gap 1, overlap 398584 398585 GTTGACGCAGCCGCG CCC-GCC ACA GGCTGGG TTTGTTCACTCATTG ushA 398837 - 400489 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 512 400520 - 400497 - T 95 -13.2 -3.67976 | opp_overlap 400490 400495 400493, overlap 400490 GGCAGTAATCCGAAA GTGCCGGATA TTTG CATCCGGCAC AATGCTTAATCGCGG ybaK 401005 - 400526 - | hypothetical protein TERM 513 400664 - 400675 + g 93 -5.8 -5.24129 | opp_overlap 400664 400663 GGGGGCGTCGATAAT CGTC GGCA GACG TTTTTTCTGCCCCAG TERM 514 401182 - 401203 + r 90 -7.3 -5.40072 | overlap 401183 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 515 401183 - 401202 + r 83 -10.8 -3.83561 | overlap 401182 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA ybaP 402003 - 401209 - | putative ligase TERM 516 401805 - 401824 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG ybaQ 402087 - 402482 + | hypothetical protein TERM 517 402681 - 402660 - T 75 -10.1 -3.59979 | opp_overlap 402647, overlap 402674 TGCGTCGATGCCAAA TGCGCCGCC CTAA AGCAGCGCA TCCGCAATGACGTAC ybaR 405201 - 402697 - | copper exporting ATPase ybaS 405463 - 406395 + | glutaminase ybaT 406398 - 407690 + | putative amino acid/amine transport protein ybbI 407815 - 408222 + | DNA-binding transcriptional regulator CueR ybbJ 408678 - 408223 - | hypothetical protein ybbK 409595 - 408678 - | putative protease TERM 518 409476 - 409499 + g 72 -9.7 -3.33969 | GAGCCCCGGCTGTAA CGTTTTGGT ATAGCG ACCAAAACG TTCTACCGTCCATTG TERM 519 410380 - 410347 - gH 72 -10.3 -2.76833 | overlap 410346 410349 AAAGACGAAATTAAT CATGCGGATAAAGTG ATTA CACTGCAACCGCATG CCGGAGAAATGCAGG ybbL 409741 - 410418 + | putative ABC transporter ATP-binding protein YbbL TERM 520 411169 - 411143 - gT 73 -10.9 -2.59742 | overlap 411142 CGTAAGTTTTATAAT TCGCGCCACCA GTTGG TGGTGACGCAA TTGAAGAAGAAATGA ybbM 410378 - 411184 + | putative metal resistance protein TERM 521 411213 - 411182 - T 95 -10.9 -4.4846 | opp_overlap 411187 411190, overlap 411183 CAATTGAAGAAGAAA TGATGCGATGCCG GATGCG CAGCATCGCATCC GGCGTTGTGGTTCAT TERM 522 411212 - 411183 - T 90 -14.4 -3.27992 | opp_overlap 411187 411190, overlap 411182 AATTGAAGAAGAAAT GATGCGATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA TERM 523 411187 - 411220 + T 100 -16.8 -2.81547 | opp_overlap 411183 411182, overlap 411190 GAAGAAGAAATGATG CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA TERM 524 411190 - 411217 + T 95 -14.9 -3.55487 | opp_overlap 411183 411182, overlap 411187 GAAGAAATGATGCGA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC ybbO 412970 - 412161 - | short chain dehydrogenase tesA 413586 - 412960 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 525 413256 - 413287 + gH 78 -12.4 -2.71011 | gap 1, opp_overlap 413286, overlap 413243 GGCGCAGCGTTTGCT CGGTTTGCTGTGGCT GAA AACCAC-GCAAACCG TCATTGCCGCCCAGT TERM 526 413520 - 413500 - GH 78 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCG GCGG-CACG GAAGGTTAACAGGAC TERM 527 413801 - 413830 + GH 75 -5.7 -4.72386 | gap 1, opp_overlap 413795 413794 ACGAAGAAGCGCGGG CAAAGTTG-CGCGC GAA GCACGTCGGCTTTG TTTTTCAGTCATTTA ybbA 413554 - 414240 + | putative ABC transporter ATP-binding protein YbbA TERM 528 414717 - 414727 + FH 76 -8.2 -4.11484 | opp_overlap 414717 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAACCCCTTCCA TERM 529 415559 - 415572 + FH 70 -9.5 -3.08798 | GCTACCTCTGCGCCT GGCGG TTAG CCGCC TGTTACGTCAGCCGT TERM 530 416557 - 416571 + FH 73 -11.4 -2.6999 | overlap 416553 416550 416555 GGATTGTTCTGCCGT GCAGCG GTG CGCTGC TGCTGTCGCTTTTCG SBO_0399 417077 - 417379 + | hypothetical protein SBO_0400 417237 - 417641 + | putative protein in rhs element TERM 531 418345 - 418320 - g 77 -6.2 -4.61482 | gap 2 GTGGTGAAAAAAGAA CTG-GCG-GACG GCAG CGTCACGCGCAG CGGGTATGACGCGGC SBO_0401 417819 - 420836 + | putative protein in rhs element insB 421059 - 421562 + | IS1 ORF2 SBO_0403 421931 - 422353 + | hypothetical protein TERM 532 422748 - 422733 - T 78 -6.2 -4.67048 | CTATCTGAAAATAAA TAATCC TTCC GGATTA AAATAAATTCTTGCC SBO_0404 423342 - 422935 - | hypothetical protein ybbB 424516 - 423422 - | tRNA 2-selenouridine synthase TERM 533 423896 - 423909 + g 72 -4.5 -4.70879 | opp_overlap 423895 CCACAGGCGCAAATC CTGAC GGGC GTCGG TTTTTAGCATTTCGG SBO_0406 424887 - 424585 - | putative IS1 encoded protein insB 424980 - 425483 + | IS1 ORF2 TERM 534 426309 - 426324 + F 73 -4 -4.82819 | gap 1, opp_overlap 426309, overlap 426311 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG ybbT 426517 - 426999 + | ureidoglycolate hydrolase ybbU 427077 - 427892 + | DNA-binding transcriptional repressor AllR TERM 535 427905 - 427922 + F 100 -12.7 -5.40474 | TAATGTCTGTCGCAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT gcl 427982 - 429763 + | glyoxylate carboligase SBO_0412 430055 - 429876 - | putative IS1 encoded protein insB 430130 - 430633 + | IS1 ORF2 TERM 536 431373 - 431356 - g 70 -4.1 -4.72272 | CCGTTTCACTAAAAA TCTGCGT CACC ACGTAGA AAATGCCGATCTGTT TERM 537 431607 - 431593 - g 72 -7.1 -4.18494 | opp_overlap 431595 CACGCTGATTGAAAA CACGC TTCAG GCGTG CGTTGAATATCATGA folD 430772 - 431638 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase ybcJ 431640 - 431852 + | hypothetical protein TERM 538 431861 - 431882 + F 100 -15.9 -3.95836 | TGCCTGATCCCTTTC CCGGCCTGT ATCA ACAGGCCGG TTCTCTTTTCAGACT TERM 539 432103 - 432119 + G 78 -5.1 -4.77036 | opp_overlap 432099 GTCGTTTAAATTTGG CGTTGCT TAC GGCAATG TTTTTGGTCATCGCG ybcI 431960 - 432481 + | hypothetical protein TERM 540 432505 - 432482 - T 100 -16.8 -3.32844 | TGGCGCAGGCGATAA CCGGATGCGA AAAC TCGCATCCGG CAACAGCGCAATTAC cysS 433903 - 432584 - | cysteinyl-tRNA synthetase TERM 541 434320 - 434310 - g 72 -5.4 -4.58283 | CAACGGTCTGAAAAA TACC CGT GGTA CGCTGGCAATGGCCC ppiB 434077 - 434571 + | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 542 434609 - 434644 + G 100 -12.7 -5.00616 | gap 1, opp_overlap 434619 AGATCTTCATCTCTG CGTGGAAGAACCGGCG ATCAC CGCCGGTT-TTCTGCG TTTTTTAGCGGGGGA TERM 543 434635 - 434619 - g 85 -11.5 -3.61398 | opp_overlap 434609 CTCTGCGTGGAAGAA CCGGCGA TCA CCGCCGG TTTTCTGCGTTTTTT TERM 544 434801 - 434815 + G 74 -6.4 -4.46212 | TCCCTGTTATTTCAT TCATGG CAA CCGTGA TTTTCTGCTCGGCAA ybbF 434574 - 435296 + | UDP-2,3-diacylglucosamine hydrolase purE 435414 - 435923 + | phosphoribosylaminoimidazole carboxylase purK 435920 - 436987 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 545 437686 - 437670 - T 82 -7.9 -4.56597 | CTCTGGCTGCAAAAA CGCCGGA TCA TCAGGCG AAACCTCAATGCGCG ylbF 438827 - 438012 - | putative carboxylase TERM 546 438265 - 438249 - G 81 -5 -5.1615 | GGAACAGGCAAAAAA CGGGCG ACCGG CGCGCG CATCTAAAGCGCCAT ylbE 439839 - 438838 - | hypothetical protein TERM 547 439040 - 439028 - G 74 -7.7 -4.07885 | CACGCGCCCTGAAAA TCCCA GCC TGGGA TCTGCAACTGCATAT TERM 548 440029 - 440012 - R 71 -3.3 -4.78149 | CTGATAAGTGAAAAA GCCGGTT GCAC ATCCAGC CAGTGTGGACGAGCA TERM 549 440333 - 440302 - R 82 -11.5 -3.61244 | GAGCGGATAAATTAA CGCTGCCGCCAGC AAGGTG GCTTCCGGCAGCG AACTCACTACCGCGA SBO_0425 441904 - 440999 - | insertion element IS2 transposase InsD SBO_0426 442227 - 441862 - | insertion sequence 2 OrfA protein TERM 550 442570 - 442554 - R 74 -7.2 -4.2717 | ATCACGTTAGCAAAA GCCAGC GGCGT GCCGGC AATCATCGACGTACC insB 443638 - 443135 - | IS1 ORF2 fimZ 444436 - 443861 - | transcriptional regulator FimZ SBO_0430 444514 - 444801 + | IS600 ORF1 SBO_0431 444956 - 445687 + | IS600 ORF2 TERM 551 445812 - 445835 + T 75 -9.6 -3.59262 | overlap 445816 CGGGTTTTCTTGATT CAGACGCGCA GCGG TGTGCGTTTG TTTGCCGCTATAGCG TERM 552 445816 - 445831 + T 77 -6.8 -4.43208 | overlap 445812 TTTTCTTGATTCAGA CGCGCA GCGG TGTGCG TTTGTTTGCCGCTAT TERM 553 445971 - 445941 - T 76 -11.8 -2.60079 | overlap 445951 TGACCGTATAATTCA CGCGATTACACCGC ATT GCGGTATCAACGCG CCCTTAGCTCAGTTG insB 447180 - 446677 - | IS1 ORF2 ylcD 447416 - 448543 + | putative resistance protein TERM 554 448580 - 448592 + G 87 -4.8 -5.19212 | overlap 448570 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTTTGGTGCTGAT TERM 555 450910 - 450878 - g 85 -12 -3.57144 | gap 1 TGCGTTATCCGCAAA GCTGGCGCGATAGCC CGCA GGC-ACTGCGCCAGC TACCGATCCTGACGC ybdE 448555 - 451698 + | putative inner membrane component for iron transport TERM 556 452031 - 452066 + G 84 -11.2 -3.71873 | gap 1, opp_overlap 452042 CAGCTCGGCGAGATG GTGGTCGAA-GAGCCGG TAT CCGGTTCATTTGCCCAC TTTGCCTATAAATAC pheP 451800 - 453176 + | phenylalanine transporter TERM 557 453208 - 453234 + T 100 -16.7 -5.65513 | opp_overlap 453206 453205 453203 CCGACAAAACGATGT CCGCTCTCATC CATTC GATGAGAGCGG TTTTTTTAATTACTG ybdG 454491 - 453244 - | putative transport TERM 558 454591 - 454570 - R 82 -11.5 -3.61103 | overlap 454572 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GAGAGAATTACACTT TERM 559 454589 - 454572 - R 90 -14.1 -3.38224 | overlap 454570 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGAGAGAATTACAC nfnB 455252 - 454599 - | dihydropteridine reductase ybdF 455714 - 455346 - | hypothetical protein ybdJ 456027 - 455779 - | hypothetical protein ybdK 457211 - 456093 - | carboxylate-amine ligase TERM 560 456783 - 456770 - G 82 -8.1 -4.49556 | CGTGCAGCAAATAAA TGGCG TCAT CGCCA CTGGCGCAGCCAACA TERM 561 457601 - 457569 - R 79 -11.4 -3.45571 | gap 1, opp_overlap 457597, overlap 457563 GTCTGGAAAGATGAA GCCCCAGGA-CGATA TTTC TATCAACCCTGGGGC TACCTACCCAAACCT TERM 562 457817 - 457849 + r 77 -10.6 -3.32963 | gap 1, opp_overlap 457816, overlap 457817 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GCAA TCCCCGCATATCCGG TTGTCAGGTCAGGAT TERM 563 457817 - 457848 + r 71 -10.8 -2.59564 | opp_overlap 457816, overlap 457817 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GCAA TCCCCGCATATCCG GTTGTCAGGTCAGGA entD 458567 - 457938 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 564 458281 - 458264 - G 73 -9.1 -3.59979 | TCGGTTGACGGGAAA CCACGGC CAAT GCCGTAG CCCCGCAGTGGCTAA TERM 565 458702 - 458673 - R 93 -14.3 -3.30124 | TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACGAC GCGCACTTTATCAAC fepA 460972 - 458753 - | outer membrane receptor FepA TERM 566 459095 - 459126 + g 77 -2.9 -5.11836 | gap 1, overlap 459098 TGAGTTCAACGTGTA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 567 459760 - 459732 - G 70 -10.2 -3.18849 | gap 1, opp_overlap 459749, overlap 459698 459730 CTCACACCATCAATA GCGCCG-CCGGTG TTCG CCCCGGTCAGCGC CTGGGTATTGGAACT TERM 568 460297 - 460314 + g 75 -6.9 -4.4017 | GGCCCTGGTTGATAT CCCACGC GTCA GCCTGGG TTTTGTCGAGGTTGC TERM 569 460777 - 460790 + g 70 -3.7 -4.64657 | TGATCTCCGACACAT CGCGG GCAA CCGGG TTTTTGCGGATTTCA TERM 570 461480 - 461490 + G 72 -6.8 -4.15044 | ATGCCAACTGGCGCG GCAG CTA CTGC TTTATTCCCACCGAA TERM 571 461587 - 461569 - g 77 -8.2 -4.08692 | GAAGGCTGGCGAAAA CTATTACC CCA GGCAATAG CCGATCCGCTGAATC fes 461293 - 462417 + | enterobactin/ferric enterobactin esterase ybdZ 462420 - 462638 + | putative cytoplasmic protein TERM 572 464053 - 464037 - g 95 -10.1 -4.64144 | overlap 464028 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGCAGATGCGCGT TERM 573 464901 - 464913 + G 70 -6.9 -4.07687 | CGGCGGTAGATGTCA GCTGG TAT CCGGC TTTTGGCGAGGAACT TERM 574 465851 - 465861 + G 78 -8.2 -4.18762 | CTGTTTTGTTTCCAT CCGG CAT CCGG TTTTGCCTGGCAGTT entF 462635 - 466516 + | enterobactin synthase subunit F TERM 575 466561 - 466535 - f 77 -8.9 -3.94811 | opp_overlap 466535 AATATTATCTATAAA CCCATAATTAC AGAAA ATAATTATGGG TTTTTTATTTGTTTG TERM 576 466535 - 466561 + F 100 -8.2 -5.85425 | opp_overlap 466535 AATATTATCTATAAA CCCATAATTA CAGAAAA TAATTATGGG TTTTTTATTTGTTTG fepE 466731 - 467864 + | ferric enterobactin transport protein FepE fepC 468676 - 467861 - | iron-enterobactin transporter ATP-binding protein fepG 469665 - 468673 - | iron-enterobactin transporter permease fepD 470666 - 469662 - | iron-enterobactin transporter membrane protein TERM 577 471432 - 471461 + G 74 -10.7 -3.21199 | overlap 471439 TGGCAGGATTTCGTT TTCTGCTCGCCAG CCCG CTGGTGGGCGGGA TTGCGTTGCTGGGTG ybdA 470777 - 472027 + | enterobactin exporter EntS fepB 472987 - 472031 - | iron-enterobactin transporter periplasmic binding protein TERM 578 472747 - 472757 + g 74 -8.2 -3.94634 | AAAAGCCCTGGTCAT CCGC GAC GCGG TTATTTGGCGTGGTC entC 473362 - 474537 + | isochorismate hydroxymutase 2, enterochelin biosynthesis TERM 579 475757 - 475772 + G 71 -3.2 -4.87626 | AGCACAATGCCAGCG CCTTTG ATGC CAACGG TTTTTACTGTTCCGG entE 474547 - 476157 + | enterobactin synthase subunit E entB 476171 - 477028 + | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase TERM 580 477084 - 477099 + G 70 -6.1 -4.15044 | TAAAGGTATCGGCTA CGCCA CGGCGC TGGCG TTTGTTGAGGCGGGA entA 477028 - 477774 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 477777 - 478190 + | hypothetical protein TERM 581 479513 - 479535 + G 83 -9.8 -4.07246 | overlap 479501 TATGGCGCTGGTTTC CGCCTGTATC ATC GATCCGGGCG TTTACTTTGCCATGA TERM 582 479843 - 479855 + G 72 -6.9 -4.19177 | overlap 479842 GGTAGATGCGGGTAC GCGTG CTG CGCGC TTTATGTTGCAGGAT cstA 478371 - 480476 + | carbon starvation protein ybdD 480658 - 480855 + | hypothetical protein ybdH 481953 - 480865 - | hypothetical protein TERM 583 482714 - 482741 + r 75 -6.2 -4.39696 | opp_overlap 482690 AGTGTGCTGGCGCAT CCGCAGCTGC GTGAGCGG GCAGTGGCGG TTTCTTCATTTGGCA TERM 584 483178 - 483206 + r 72 -8.2 -3.81137 | gap 1 GAAGGAATCGACGTT GCTGGCAGCAG CTGAACGC CTGC-GCCAGC TTTAGCTATTTAACC ybdN 484729 - 483212 - | hypothetical protein TERM 585 484799 - 484815 + r 73 -4.5 -4.86621 | ATAAAGTAAACACTG TAAAGCA GAG TGTTTTA TTTTTCATTCGCGCT insB 485777 - 485274 - | IS1 ORF2 SBO_0465 485852 - 486130 + | putative IS1 encoded protein insB 487080 - 486577 - | IS1 ORF2 SBO_0467 488268 - 487363 - | insertion element IS2 transposase InsD SBO_0468 488591 - 488226 - | insertion sequence 2 OrfA protein TERM 586 489539 - 489517 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 489464 - 490027 + | alkyl hydroperoxide reductase subunit C TERM 587 490091 - 490110 + F 100 -13.6 -4.63218 | AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 588 490242 - 490225 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 490168 - 491763 + | alkyl hydroperoxide reductase, F52a subunit TERM 589 491794 - 491817 + T 90 -7.3 -5.27923 | opp_overlap 491810 491813 ACCTGCAATTGCTTA GCCGCCGGG GTCAAA CCTAGCGGC TTTTTTATGGCATTA TERM 590 491863 - 491837 - T 100 -18 -4.7373 | opp_overlap 491830 491829, overlap 491813 491810 TTATGGCATTAAAAA GCCCTGCCGGGA TGT TCCAGGCAGGGC GGCATAAATACTTTT ybdQ 492312 - 491884 - | hypothetical protein ybdR 492533 - 493771 + | putative oxidoreductase TERM 591 493967 - 493948 - gT 88 -12.2 -3.53811 | CTGATTTTGCGTAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 494412 - 494002 - | nucleoside diphosphate kinase regulator SBO_0474 493852 - 494313 + | hypothetical protein TERM 592 494492 - 494470 - TR 100 -12.7 -5.11836 | opp_overlap 494470 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 593 494470 - 494492 + Tr 86 -11.2 -3.6608 | opp_overlap 494470 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT rna 495448 - 494642 - | ribonuclease I TERM 594 495426 - 495412 - G 77 -8.5 -4.13872 | overlap 495403 495422 495423 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGCCAGAATG TERM 595 495493 - 495534 + r 100 -29.7 -4.19371 | opp_overlap 495493 ATACTATCTATTAAA TCATCACGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 596 495534 - 495493 - R 100 -29 -3.77464 | opp_overlap 495493 ATACTATCTATTAAA TCATCACGCCCGCCAGGT GGGCTT ACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG ybdS 497022 - 495559 - | putative a membrane protein TERM 597 496540 - 496524 - G 77 -6.5 -4.64598 | opp_overlap 496530, overlap 496495 496525 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 598 496539 - 496525 - G 72 -10 -3.38036 | opp_overlap 496530, overlap 496495 496524 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG citG 497950 - 497102 - | triphosphoribosyl-dephospho-CoA synthase TERM 599 497184 - 497201 + g 77 -6.2 -4.63928 | ATAATCGAGATCGGC GGGGGT TCGAAT GCCCCC TTTTTGCAATAATGT TERM 600 498009 - 498024 + r 83 -10.4 -3.72576 | ATGGGTTTTCCACGC GCGCAG ACGG CTGCGC TTTGCTCGCACAACA citX 498475 - 497987 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase citF 500011 - 498479 - | citrate lyase alpha chain citE 500945 - 500022 - | citrate lyase beta chain, acyl lyase subunit citD 501223 - 500927 - | citrate lyase subunit gamma citC 502383 - 501238 - | citrate lyase synthetase TERM 601 501982 - 501971 - G 77 -7.2 -4.58395 | opp_overlap 501978, overlap 501973 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT TERM 602 502230 - 502244 + g 100 -2.7 -6.14618 | overlap 502231 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 603 502231 - 502243 + g 70 -6.2 -4.25111 | overlap 502230 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 604 502324 - 502371 + g 77 -2.9 -5.13343 | gap 1, overlap 502325 CCTGAAGGTGCATGT TGTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAACTGATAACC TTTTATTTTCACTTG TERM 605 502448 - 502460 + H 82 -2.7 -5.5454 | ACATCCTAAGGAGTA TTTCG GCG TGAAA TTTTTATTTATTTAA TERM 606 503826 - 503838 + H 71 -3.3 -4.7373 | TTTGCCGATCGCTAG GTGGC GGG GCTGC TTTTTGGTAAAGTGC citB 504271 - 504951 + | two-component response regulator DpiA TERM 607 504954 - 504990 + T 74 -8.7 -3.94746 | opp_overlap 504961 504973, overlap 504956 504957 504960 504961 CCACAGTGGGTGACA TGATAAAGCCGGAGGAA ACT TGCCTCCGGCATTACTA TTTACTTGCCTGTGA TERM 608 504956 - 504988 + T 72 -9.1 -3.56006 | opp_overlap 504961 504973, overlap 504954 504957 504960 504961 ACAGTGGGTGACATG ATAAAGCCGGAGGAA ACT TGCCTCCGGCATTAC TATTTACTTGCCTGT TERM 609 504957 - 504987 + T 78 -12.6 -2.72881 | opp_overlap 504961 504973, overlap 504956 504954 504960 504961 CAGTGGGTGACATGA TAAAGCCGGAGGAA ACT TGCCTCCGGCATTA CTATTTACTTGCCTG TERM 610 504960 - 504984 + T 75 -9.9 -3.50456 | opp_overlap 504961 504973, overlap 504957 504956 504954 504961 TGGGTGACATGATAA AGCCGGAGGAA ACT TGCCTCCGGCA TTACTATTTACTTGC TERM 611 504983 - 504961 - T 95 -13.4 -4.0162 | opp_overlap 504960 504957 504956 504954 504961, overlap 504973 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG TERM 612 504961 - 504983 + T 81 -13.4 -2.6955 | opp_overlap 504961 504973, overlap 504960 504957 504956 504954 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG dcuC 506377 - 504992 - | C4-dicarboxylate transporter DcuC TERM 613 506435 - 506418 - H 86 -2.7 -5.66229 | AGTAATAATAAAAAA TTCCTAA AGCT TAAGGAA AAAATATGCCCAATA TERM 614 507190 - 507167 - g 100 -4.5 -5.73978 | overlap 507168 ACGACAAAGAAAAAA CCGATCGCT ATAACG AGCGACCGT GGGGTGTCGGTTTTG TERM 615 507189 - 507168 - g 74 -8 -4.01946 | overlap 507167 CGACAAAGAAAAAAC CGATCGCT ATAACG AGCGACCG TGGGGTGTCGGTTTT crcA 506965 - 507525 + | palmitoyl transferase for Lipid A cspE 507700 - 507909 + | cold shock protein CspE TERM 616 507933 - 507949 + T 100 -9.4 -5.85178 | opp_overlap 507933 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGGTCTT TERM 617 507949 - 507933 - T 83 -9.4 -4.36729 | opp_overlap 507933 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGGTCTT crcB 508347 - 507964 - | hypothetical protein TERM 618 509081 - 509063 - g 77 -3 -5.06414 | opp_overlap 509065 509077, overlap 509065 GTGCGGGAACAAAAA TATCGGGC AAA GCCGGATT ATAGATCCCTTTGGC ybeM 508665 - 509228 + | putative amidase tatE 509357 - 509560 + | twin arginine translocase protein E TERM 619 509607 - 509624 + T 82 -5.5 -5.24129 | opp_overlap 509608, overlap 509608 GTTCGATACAAAAAA ACCGCTT CAAA AAGCGGG TTTTTTATCAGACAG TERM 620 509623 - 509608 - T 100 -9 -5.71712 | opp_overlap 509607 509608 TTCGATACAAAAAAA CCGCTT CAAA AAGCGG GTTTTTTATCAGACA TERM 621 509608 - 509623 + T 76 -9 -3.73995 | opp_overlap 509608, overlap 509607 TTCGATACAAAAAAA CCGCTT CAAA AAGCGG GTTTTTTATCAGACA lipA 510626 - 509661 - | lipoyl synthase TERM 622 510516 - 510549 + g 74 -6 -4.57073 | gap 1, overlap 510518 TTTCATCCATTCCGG CTTGCGCAGCAGGGC TTCGC GCTCTGTTGC-CACG TTTTTAACCGGGATA ybeF 511635 - 510835 - | putative DNA-binding transcriptional regulator lipB 512688 - 512047 - | lipoyltransferase ybeD 513052 - 512789 - | hypothetical protein TERM 623 513108 - 513081 - R 75 -9.8 -3.56675 | opp_overlap 513085, overlap 513079 513085 TAACGTAATTAAATA GCAACTCCCGCC AGAA GGCGGGAGTTTT TTTACTGATGCTTAG TERM 624 513104 - 513085 - R 100 -15 -3.50456 | opp_overlap 513085, overlap 513081 513079 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTTACTGATGC TERM 625 513085 - 513104 + r 100 -15 -5.55664 | opp_overlap 513085 513081 513079 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTTACTGATGC dacA 514374 - 513163 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 626 514057 - 514042 - G 77 -10.4 -3.64049 | CGAAGAACCTTTAAA CACCGG GTTA CCGGTG GCCCATGCGTCGTTG rlpA 515602 - 514514 - | rare lipoprotein A mrdB 516725 - 515613 - | cell wall shape-determining protein TERM 627 516666 - 516700 + g 100 -6.5 -5.80364 | CAGTAAGATCAGCAG CATTGTGGGATCGAG ATGGA CTTTATCCCAGAATG TTTTTTTATTCGGAT mrdA 518629 - 516728 - | penicillin-binding protein 2 TERM 628 517293 - 517306 + g 74 -2.3 -5.03747 | opp_overlap 517304, overlap 517284 517304 ACCGGAATGGTGTCA CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 629 518570 - 518558 - G 77 -6.2 -4.66264 | overlap 518559 CAAAATCCCCAAAAA GGCG ACCAG CGCC CGGCGCACAAACAGC ybeA 519127 - 518660 - | SPOUT methyltransferase superfamily protein ybeB 519340 - 519131 - | hypothetical protein nadD 520983 - 520342 - | nicotinic acid mononucleotide adenylyltransferase TERM 630 520685 - 520675 - G 70 -4.6 -4.48713 | overlap 520677 CTGACCAATAATAAA CGCC AGC GGCA CGTCCGGTCCTTGTT holA 522016 - 520985 - | DNA polymerase III subunit delta TERM 631 521995 - 521953 - G 100 -12 -4.45544 | gap 1, opp_overlap 521957, overlap 521955 521957 CGTTACCAAGTAAAA GATACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGT-TG TTCCGGGTACAACCG TERM 632 521994 - 521955 - G 100 -17.1 -3.83437 | opp_overlap 521957, overlap 521953 521957 TTACCAAGTAAAAGA TACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGTT GTTCCGGGTACAACC TERM 633 521957 - 521992 + g 100 -17.5 -3.63515 | opp_overlap 521955 521953 521957 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA TERM 634 521992 - 521957 - G 100 -19.7 -3.49321 | opp_overlap 521957, overlap 521955 521953 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA rlpB 522597 - 522016 - | LPS-assembly lipoprotein RplB TERM 635 522366 - 522398 + g 70 -4.7 -4.55295 | opp_overlap 522371 CGATGCTCACTTTAC CCAAACGCAGGGATG GAA CGTCCTTACGCGTGG TTTCTTTATCAAGCA TERM 636 522532 - 522513 - G 72 -10 -3.36785 | overlap 522514 TCATAGTGGAAGGAA CCTGCGTG GTAT CACGCAGA TGCCAGCCACACCCG TERM 637 522531 - 522514 - G 73 -11.3 -2.6175 | overlap 522513 CATAGTGGAAGGAAC CTGCGTG GTAT CACGCAG ATGCCAGCCACACCC leuS 525194 - 522612 - | leucyl-tRNA synthetase TERM 638 524849 - 524865 + g 78 -5.1 -4.8048 | opp_overlap 524847 AGTCATAACCAAAGC CCAGC ATTTTGA GCTGG TTTTTCATATACGCG TERM 639 524954 - 524979 + g 74 -6.2 -4.57073 | gap 2, opp_overlap 524953 CAGGCAGACCAAACG CGTCC--CAGCC GATC GGCTGCAGGACG TTTTTGCCCAGCATA ybeL 525429 - 525911 + | hypothetical protein ybeQ 526964 - 525981 - | hypothetical protein TERM 640 526064 - 526082 + g 76 -11 -3.30039 | opp_overlap 526053, overlap 526061 GATACAGGTCGAGAG CCTGTCGG AGA TCGACAGG TCTTCCTTCTCCGTA TERM 641 526579 - 526604 + g 76 -7.5 -4.1523 | opp_overlap 526569, overlap 526569 GACATTCCGCTCTCC GCGGCTATCTG ATAC CAGACAACCGC TTCTTTATAATTGGG TERM 642 526879 - 526863 - G 73 -3.7 -4.81212 | GCGATTATAATAAAA CCCAACA ATA TATTGAG CCTCGCAATCGCCTT ybeR 527121 - 527828 + | hypothetical protein ybeS 527825 - 529252 + | putative enzyme of polynucleotide modification SBO_0512 530516 - 529677 - | IS911 ORF2 TERM 643 530085 - 530096 + g 77 -5.8 -4.63218 | opp_overlap 530081 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 644 530437 - 530457 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 645 530969 - 531012 + r 100 -18.8 -3.91144 | ACGATGTGTTTTTTG CGCCGATGCCGGATGCAGCG TTTA CGCCGCATCCGGCAGCCGTG TTTATGGGATCTCAA ybeW 532684 - 531014 - | putative dnaK protein TERM 646 532756 - 532719 - R 76 -9.3 -3.77089 | gap 1, overlap 532717 AAAAAGAGATAAACA GATTAAGACCACC-CAGG TAA CGCGTGGTGATCTTAATC AATGACGTGTGTTAA rihA 533703 - 532768 - | ribonucleoside hydrolase 1 gltL 534546 - 533821 - | ATP-binding protein of glutamate-aspartate transport system gltK 535220 - 534546 - | glutamate-aspartate transport system permease gltJ 535960 - 535220 - | glutamate-aspartate transport system permease TERM 647 535651 - 535634 - G 71 -2 -5.01811 | GGATGAAAGGAAAAA CTGAAT ATTGGG ATCCAG CTCGGCCTTAAACCA TERM 648 536007 - 535980 - R 100 -16.4 -5.26316 | CTACTCCAGAAAAAA GAGGGTAGCAGC GTTA ACTGCTACCCTC GAAGATTGTTACCCA ybeJ 537038 - 536130 - | glutamate and aspartate transporter subunit TERM 649 536373 - 536384 + g 70 -5.8 -4.29326 | CTTGCCGACGATATC CCAG TTGT CTGG TTTCTTCGCTTTCGC TERM 650 536588 - 536616 + g 81 -7.3 -4.72272 | CGGCTTTGTCTTTCA GGTCGGCAAAATC TTT GATATCGCCGCCC TTTTTGGTCAGCAGG TERM 651 537637 - 537653 + G 83 -12.3 -3.37915 | overlap 537635 GCACTTATCCATCTC GGCGCAA ACG TTGCGCC TCTTACTTTGTCGGG SBO_0519 537493 - 539259 + | hypothetical protein insB 539487 - 539990 + | IS1 ORF2 TERM 652 540173 - 540153 - T 100 -13.3 -5.10208 | GAACCGTAAGAAAAA GGGGCATGA TAA CCATGCCCC AAAGCTCAATGAGAA lnt 541762 - 540224 - | apolipoprotein N-acyltransferase TERM 653 541099 - 541126 + g 72 -10.6 -3.12351 | opp_overlap 541093 541094 CCATCGAAACCTGAA TGGTTTTCTCCG GTTG CGGGGTAAACCA TTGGATGTAACGCAG TERM 654 541712 - 541738 + g 70 -10.2 -3.20723 | gap 1, opp_overlap 541712 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC TERM 655 541738 - 541712 - G 81 -10.2 -3.97307 | gap 1, opp_overlap 541712 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC ybeX 542665 - 541787 - | putative transport protein TERM 656 542724 - 542701 - R 86 -8.8 -4.43477 | overlap 542703 542720 GTTAGTTAATCAAAA CGCCGTCGTT AATC ACCAACGGCG GGGACGTCTGCCAGT ybeY 543222 - 542755 - | putative metalloprotease TERM 657 543163 - 543178 + g 73 -9 -3.67611 | TTGAAACTGGCTCTC TTCCGG TAAC CCGGAA TTATCTTCACATGCC ybeZ 544298 - 543219 - | putative ATP-binding protein in pho regulon TERM 658 543253 - 543266 + g 73 -3.7 -4.86293 | overlap 543239 543239 TCGCGCTTGCGTTCT GCCGC CAGC GCCGC TTTTCGTTTTTGTTC TERM 659 543898 - 543917 + g 82 -9.2 -4.26292 | overlap 543879 GCCTGGTTTGGCGTG CGCGGCTT AATT ACGCCGCG TTTAGTTTTGATATT TERM 660 544407 - 544382 - R 100 -13.3 -5.51046 | gap 1, overlap 544385 TAAAGAGAGAAAAAA CAAGGCCCACCG GAA CGGCGGGCCT-G AGAATTACGGCTGAT TERM 661 544405 - 544385 - R 100 -16.1 -4.78477 | overlap 544382 AGAGAGAAAAAACAA GGCCCACCG GAA CGGCGGGCC TGAGAATTACGGCTG yleA 545836 - 544412 - | hypothetical protein TERM 662 545487 - 545464 - G 72 -10.2 -3.39505 | gap 1, opp_overlap 545463 545476 AGCTGATATCTACAA CCGGGCTGCGG TCG CCGC-GCACGG AGTTGATCATCTCCG ubiF 545982 - 547157 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 663 547306 - 547279 - T 77 -11.4 -3.28209 | opp_overlap 547285, overlap 547285 ATGAACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTT AATGTGGCTGGGGTA TERM 664 547300 - 547285 - T 100 -10.4 -5.1417 | opp_overlap 547285, overlap 547279 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 665 547285 - 547300 + T 100 -10.4 -5.22312 | opp_overlap 547285 547279 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 666 547495 - 547506 + T 73 -4.4 -4.81249 | CCGCTTGGCGATACC CCAA CAAA TTGG TTTTTGAATTTGCCG TERM 667 548353 - 548390 + T 100 -12 -4.38203 | opp_overlap 548354 548355 548360, overlap 548354 548355 548360 ACAAGCACCTCAATA ACTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCGCA TTTCTTACTTATATG TERM 668 548354 - 548389 + T 100 -15.5 -3.21837 | opp_overlap 548354 548355 548360, overlap 548353 548355 548360 CAAGCACCTCAATAA CTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCGC ATTTCTTACTTATAT TERM 669 548388 - 548354 - T 100 -16.6 -3.66732 | gap 1, opp_overlap 548354 548353 548355 548360, overlap 548355 548360 CAAGCACCTCAATAA CTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTC-G CATTTCTTACTTATA TERM 670 548355 - 548388 + T 100 -19 -2.52018 | opp_overlap 548354 548355 548360, overlap 548354 548353 548360 AAGCACCTCAATAAC TGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCG CATTTCTTACTTATA TERM 671 548388 - 548355 - T 100 -16.8 -2.79557 | opp_overlap 548355 548354 548353 548360, overlap 548354 548360 AAGCACCTCAATAAC TGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCG CATTTCTTACTTATA TERM 672 548360 - 548383 + T 100 -15.3 -3.76534 | opp_overlap 548354 548355 548360, overlap 548355 548354 548353 CCTCAATAACTGAAA CAGCCCCGG ATTTCA CCGGGGCTG TTTCGCATTTCTTAC TERM 673 548383 - 548360 - T 100 -15.3 -3.85389 | opp_overlap 548360 548355 548354 548353, overlap 548354 548355 CCTCAATAACTGAAA CAGCCCCGG ATTTCA CCGGGGCTG TTTCGCATTTCTTAC asnB 550059 - 548395 - | asparagine synthetase B TERM 674 548437 - 548447 + g 75 -5.4 -4.64334 | opp_overlap 548437, overlap 548429 548435 AACCGCACGACCAGA TGGA TCG TCCA TTTTCTTGAACGCTT TERM 675 548759 - 548769 + g 71 -3.2 -4.87318 | overlap 548753 GACTCAAAACATTCA CGCA GGA TGTG TTTTTCCATTTTGCC TERM 676 550130 - 550116 - R 95 -7.8 -5.40072 | overlap 550125 550128 GCTTGTTTAAAAAAA TGCCGC AAA GCAGCA CTGTGCGCAAGCGAT TERM 677 550452 - 550426 - R 77 -11.7 -2.78384 | gap 1, opp_overlap 550427 550431, overlap 550431 GCGTTTGTCATCAGA GCCAACCACGTC CGCA GACGTGGTTG-C TATTCAGATAACGTC TERM 678 550427 - 550452 + r 78 -11.9 -3.06162 | opp_overlap 550426 550431, overlap 550431 CGTTTGTCATCAGAG CCAACCACGTC CGCA GACGTGGTTGC TATTCAGATAACGTC TERM 679 550431 - 550448 + r 79 -11.3 -3.37245 | opp_overlap 550426 550431, overlap 550427 TGTCATCAGAGCCAA CCACGTC CGCA GACGTGG TTGCTATTCAGATAA TERM 680 550448 - 550431 - R 77 -11.3 -3.14468 | opp_overlap 550431 550427, overlap 550426 TGTCATCAGAGCCAA CCACGTC CGCA GACGTGG TTGCTATTCAGATAA nagD 551208 - 550456 - | UMP phosphatase nagC 552476 - 551256 - | transcriptional repressor of nag operon nagA 553633 - 552485 - | N-acetylglucosamine-6-phosphate deacetylase TERM 681 552788 - 552778 - G 70 -4 -4.59773 | TTTTACCCGCAAAAA TGAA CTG TTCA ATGTTGGCACCTGCT TERM 682 552838 - 552850 + g 73 -9.1 -3.66356 | CCAGACACAGTTTGT CGCCT TTA AGGCG TTTAGCGTTACGAAT nagB 554493 - 553693 - | glucosamine-6-phosphate deaminase TERM 683 554107 - 554120 + g 100 -6.7 -5.52023 | AAACAGATGAATTTT TCCGT AAGA ACGGA TTTTTTCTTCATACT TERM 684 554881 - 554903 + G 85 -13.4 -3.1886 | overlap 554893 TACAGCTCCCTATCG CGGTGCTGCC GGT GGCGGCACTG TTGCTGCGATTCGGT nagE 554826 - 556772 + | N-acetyl glucosamine specific PTS system components IIABC TERM 685 556823 - 556845 + F 100 -12 -6.15828 | opp_overlap 556774 556823 ATCCAACAATGACAA GCGGTGGAGA TCT TCTCTGCCGC TTTTTTTTTCATCAA TERM 686 556914 - 556901 - f 75 -3.1 -5.10029 | ATCAATTTTAAAAAA CTAAC AGTT GTCAG CCTGTTCCGCTTATA glnS 556975 - 558639 + | glutaminyl-tRNA synthetase TERM 687 558840 - 558856 + F 100 -11.5 -5.4588 | opp_overlap 558840 GCAAACAATCCCAAA CGCCGCG CTC TGCGGCG TTTTTTCTGCTTTTC TERM 688 558856 - 558840 - f 83 -10.8 -3.74238 | opp_overlap 558840 GCAAACAATCCCAAA CGCCGC GCTCT GCGGCG TTTTTTCTGCTTTTC TERM 689 560069 - 560049 - f 74 -8.3 -3.86897 | opp_overlap 560048 560055 GGTACCCGCGATAAA GTTGACGAT CGC AGCGTCAAC GATCTTTATGACGGC TERM 690 560331 - 560318 - f 78 -6.7 -4.63527 | GTATGACCTGAAAAA CTGGA ATCT TCCAG GCTTCGCCATCGGCG ybfN 560674 - 561000 + | hypothetical protein TERM 691 561001 - 561020 + T 80 -5.7 -5.011 | opp_overlap 560998 561001 561003 AGTAATAACAAATAA GTGAGAG CTGTAA CTCTCGC TTTTCTTATTTCCCT TERM 692 561041 - 561070 + T 78 -12.3 -2.72463 | opp_overlap 561047, overlap 561047 TTATTTCCCTTGCAT AAAAAAGCCAACC CGCA GGTTGGCTTTTTC TCATTCAGGCTGGCT TERM 693 561064 - 561047 - T 100 -11.3 -5.24129 | opp_overlap 561041 561047 CCCTTGCATAAAAAA GCCAACC CGCA GGTTGGC TTTTTCTCATTCAGG TERM 694 561047 - 561064 + T 100 -11.3 -4.98255 | opp_overlap 561047, overlap 561041 CCCTTGCATAAAAAA GCCAACC CGCA GGTTGGC TTTTTCTCATTCAGG fur 561531 - 561085 - | ferric uptake regulator TERM 695 561814 - 561787 - R 100 -16.4 -3.19463 | overlap 561789 GGCATTATCTATTAA TACGGCGTAGAC ATGA GTCTACGCCGCA TCACATCAGGCATTA TERM 696 561812 - 561789 - R 100 -16.8 -3.15996 | overlap 561787 CATTATCTATTAATA CGGCGTAGAC ATGA GTCTACGCCG CATCACATCAGGCAT fldA 562350 - 561820 - | flavodoxin FldA ybfE 562852 - 562490 - | LexA regulated protein ybfF 563687 - 562923 - | hypothetical protein TERM 697 564077 - 564095 + G 81 -11 -3.60151 | opp_overlap 564077 564076 ACGATTAAAGACAAG GTTCGCGC AAT GCGTGAAC TTCTGCTTTCGGACG seqA 563873 - 564418 + | replication initiation regulator SeqA TERM 698 564479 - 564458 - g 78 -10.9 -3.42621 | opp_overlap 564453 AATGGCAATCCACAA TCGTGCAGG CCAA CCTGCACAA CAGAGTGATTTGATT pgm 564444 - 566084 + | phosphoglucomutase TERM 699 566123 - 566104 - f 100 -9.2 -5.39905 | opp_overlap 566104 ATTAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTACGTATGAC TERM 700 566104 - 566123 + F 100 -11.4 -5.1287 | opp_overlap 566104 ATTAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTACGTATGAC TERM 701 566684 - 566697 + G 74 -2.3 -5.09895 | TCAATGAGGATTATG TCAGC GAAA GCGGA TTTTTTGGCTCGATG ybfP 566299 - 566793 + | putative pectinase ybfG 567244 - 566834 - | hypothetical protein TERM 702 567796 - 567815 + r 100 -9.3 -5.48163 | opp_overlap 567796 GCCAACAAACAGAAA GGGCGAT CATTCA ATCGCCC TTTTTTACTTTGTTT TERM 703 567815 - 567796 - R 90 -10 -4.46072 | opp_overlap 567796 GCCAACAAACAGAAA GGGCGATC ATTC AATCGCCC TTTTTTACTTTGTTT speF 571366 - 569168 - | ornithine decarboxylase TERM 704 569504 - 569527 + g 77 -6 -4.7153 | overlap 569508 CATGCTTACGCGTGG GAAGTGTTCC TTAC GGAACATCTC TTTTTGCGGTTGTTT TERM 705 570663 - 570649 - G 74 -7.8 -4.03234 | opp_overlap 570633 570660 CGGTTTCCAGATAAA CCGGTG TTG CACCAG CCTGTAGCAACGCTC TERM 706 570991 - 570962 - G 72 -4.3 -4.66163 | gap 1 ATGGCGACGGAAAAA TTCG-CCGCCCTGA TGA CCAGGGCAATCAAA CGCGCTGTTACCTTG ybfK 571489 - 571746 + | hypothetical protein TERM 707 571923 - 571904 - T 83 -6.4 -5.0916 | opp_overlap 571904 TGTTTAAGATAAAAA GCCGTATT TATT ATTACGGC TTTAATTAATAAAAG kdpE 572639 - 571962 - | DNA-binding transcriptional activator KdpE kdpD 575320 - 572636 - | sensor protein KdpD TERM 708 574845 - 574815 - G 74 -2.5 -5.08824 | gap 1, opp_overlap 574821, overlap 574818 GCGGCATCGAAAAAA GGAT-CGGGCACGG TTTC CCGTACCTGAATTC CGGTGACGCCGCTGA kdpB 577913 - 575865 - | potassium-transporting ATPase subunit B TERM 709 576163 - 576146 - G 77 -9.9 -3.61517 | opp_overlap 576144 ACGCCGCCGGAATAA TGGCGAA GTAT TTCGCCA CATCGTTGGTAATGC TERM 710 576903 - 576919 + g 74 -2.2 -5.14563 | gap 1, overlap 576904 CAGCGAAGCCAGTTG TGC-GGC GTCA GCCAGCG TTTTTTCATCCACGC TERM 711 577207 - 577191 - G 74 -7.9 -4.11216 | overlap 577192 GCCCCACGCGGAAAA CGGCCAC AGC GTGGCGG TTGCCAGTAAAAAGA kdpA 579609 - 577936 - | potassium-transporting ATPase subunit A kdpF 579698 - 579609 - | KdpF protein TERM 712 579811 - 579800 - H 82 -5.8 -5.14894 | opp_overlap 579800 AAAAAAGTATAAAAA TGGC AAAA GCCA TGGTTTAACTAATGT ybfA 580011 - 580217 + | hypothetical protein TERM 713 580244 - 580265 + F 93 -6.5 -5.7946 | opp_overlap 580244 TGAATACATTGAAAA CCGCTAGTG GAGA TGCTGGCGG TTTTTTTATTAGGAA TERM 714 581253 - 581271 + G 75 -6.7 -4.30844 | gap 1, overlap 581256 AGCAGGCCATTTCCG GCGGGACG GAAC CGTCC-GC TTTTCCTGATACCCT TERM 715 581829 - 581851 + G 70 -5.6 -4.34402 | gap 1, opp_overlap 581791 581788 581786 TCACGCGCATCACCA CGCCGGATG GCAGGG CATC-GGCG TTTTACTATAACCAC rhsC 580457 - 584608 + | rhsC protein in rhs element SBO_0564 584587 - 585108 + | hypothetical protein TERM 716 585178 - 585198 + F 73 -9.7 -3.34629 | opp_overlap 585177 GAAAAATAAGATGAC GTTGGCGGT AAT GCTGCCAAC TTACTGATTTAGTGT insB 585433 - 585936 + | IS1 ORF2 TERM 717 586140 - 586126 - f 71 -7.2 -4.12902 | opp_overlap 586128 GAATTATCTGGAAAA GAGTTT TCT AAACTC ACTTGCGGTAGTATT ybgA 587054 - 587563 + | hypothetical protein TERM 718 588534 - 588524 - g 81 -8.2 -4.30014 | opp_overlap 588524 588523 GGCAGGAAGGCAAAA CGGG ATA CCCG ATTGTCGATGCTGCC phrB 587560 - 588978 + | deoxyribodipyrimidine photolyase TERM 719 589005 - 588973 - T 85 -13.6 -2.98381 | opp_overlap 588974, overlap 588970 GAAGCGAGGAAAGGA GCCTGATAAAACGC AGCGA GCGTTTTATCAGGT ATGGTGCTGGCCTAT TERM 720 588974 - 589004 + T 100 -17.1 -2.82834 | opp_overlap 588973 588970 AAGCGAGGAAAGGAG CCTGATAAAACGC AGCGA GCGTTTTATCAGG TATGGTGCTGGCCTA ybgH 590501 - 589020 - | putative transport protein TERM 721 591313 - 591337 + G 70 -3.5 -4.71426 | gap 1, overlap 591312 591316 AAAGTTTTATCGATA GCG-CCGCGC GTTTTG GCGTGGATGC TTTTATTACTGGCGA ybgI 590772 - 591515 + | putative hydrolase-oxidase TERM 722 591770 - 591795 + G 72 -6.7 -4.20918 | opp_overlap 591770 GCTGGTGGGAGGAGA GCGAGGCCCTG GAAC CTGAGTCTCGC TTTATTGAAATTCCG ybgJ 591538 - 592194 + | putative carboxylase ybgK 592188 - 593120 + | putative carboxylase TERM 723 593286 - 593303 + G 78 -8.5 -4.25104 | TGGCGCTCACCCGAG TTTTCCC GACA GGGAAAA TTTTGGTCGCAGCGC ybgL 593110 - 593844 + | hypothetical protein nei 593880 - 594671 + | endonuclease VIII abrB 595759 - 594668 - | putative transport protein TERM 724 595857 - 595830 - R 85 -12.8 -3.35522 | overlap 595828 CAATTTTCTGAAAGA GATGCCCTTTCC GGCT GCAAAGGGCATC ATGGCAAATCAGTTA insB 596624 - 596121 - | IS1 ORF2 SBO_0577 596699 - 596881 + | putative IS1 encoded protein TERM 725 596894 - 596905 + T 73 -2.2 -5.27023 | TAGAATATATGAATG TCCG ATAG TGGA TTTTATTTTTACAAT TERM 726 596972 - 596945 - T 100 -15 -4.99035 | opp_overlap 596944 596943 596941 TTAGGCATATAAAAA TTAACCCGCCAT TTGA ACGGCGGGTTAA AATATTTACAACTTA gltA 598282 - 596999 - | type II citrate synthase TERM 727 599090 - 599101 + G 70 -5.8 -4.1822 | CTCCATCGCGTTTCC GGTG TGAT CACC TTTGTTGCAGTGGGC sdhC 598991 - 599380 + | succinate dehydrogenase cytochrome b556 large membrane subunit sdhD 599374 - 599721 + | succinate dehydrogenase cytochrome b556 small membrane subunit sdhA 599721 - 601487 + | succinate dehydrogenase flavoprotein subunit sdhB 601503 - 602219 + | succinate dehydrogenase iron-sulfur subunit TERM 728 602239 - 602285 + F 70 -10.7 -2.57931 | opp_overlap 602236 602221 602238 602239 602261 602264, overlap 602238 602261 TAGGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCA ACCAG TGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA TERM 729 602410 - 602353 - g 72 -4.3 -4.67607 | gap 1, opp_overlap 602362 602363, overlap 602354 602362 602363 602401 GGCGTAACAAAGAAA TGCAGGAAATCTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAGG-TTCCTTCG CGAGCCACTACGTAG TERM 730 602401 - 602363 - g 71 -11.2 -2.89178 | opp_overlap 602362 602363, overlap 602362 602354 602353 AGAAATGCAGGAAAT CTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAG GTTCCTTCGCGAGCC SBO_0583 602278 - 602538 + | hypothetical protein TERM 731 603079 - 603063 - g 83 -5.1 -5.11063 | AGCACCGAAGAAAAA CGCTG GATCCAA CAGCG TATCGAGTCTGGTCG TERM 732 603135 - 603123 - g 100 -7.7 -5.48063 | AGCGAAGAGAAAAAA CGCTT CTT AAGCG AACTGACCGCCGCTG kgd 602520 - 605321 + | alpha-ketoglutarate decarboxylase TERM 733 605883 - 605867 - g 70 -3.6 -4.67353 | GCACGTAGTGAAAAA CGTGTC CCGAT GACTCG CCTGCGTAAGCGTGT sucB 605336 - 606553 + | dihydrolipoamide acetyltransferase TERM 734 606649 - 606617 - f 79 -12 -3.17075 | opp_overlap 606626 TCTCCGGCAATTGAA GCCTGATGCGACGC TTAAC GCGTCTTATCAGGC CTACGGGAAGCACCA TERM 735 606701 - 606670 - f 71 -10.8 -2.58767 | overlap 606680 606681 GGAAGCACCAATGTA GGTCGGATAAGGCG CTTG CGCCGCATCCGACA AGCGATGCCTGATGC TERM 736 607900 - 607887 - g 76 -9.5 -3.73068 | TCTGGAAGGTAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 606829 - 607995 + | succinyl-CoA synthetase subunit beta sucD 607995 - 608864 + | succinyl-CoA synthetase subunit alpha TERM 737 608940 - 608957 + T 100 -11.3 -5.39755 | GGTTTCGACATGGTT GGCCATC GTAT GATGGCC TTTTTTGTGCTTATC farR 609690 - 608968 - | DNA-binding transcriptional repressor MngR TERM 738 610957 - 610942 - g 77 -8.2 -4.03234 | opp_overlap 610942 610941 TCTCTGGCAGATAAA CCGGCG TTAG CGCCAG GCTTTGCGGCTGGAC hrsA 609799 - 611775 + | 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC insB 613878 - 613375 - | IS1 ORF2 TERM 739 615259 - 615286 + H 90 -10.6 -4.23213 | overlap 615248 615260 TTGACAAAGGGCGCT TTGTTCATGCCG GATA CGGCATGAACGC TTTATTCGGTCTACA TERM 740 615260 - 615285 + H 86 -14.1 -3.13446 | overlap 615248 615259 TGACAAAGGGCGCTT TGTTCATGCCG GATA CGGCATGAACG CTTTATTCGGTCTAC TERM 741 615392 - 615407 + H 82 -6.8 -4.85782 | TATCTTCACTCTCAA GCCACG TATA TGTGGC TTTATTTTTAACAAA cydA 616048 - 617619 + | cytochrome d terminal oxidase, polypeptide subunit I cydB 617635 - 618774 + | cytochrome d terminal oxidase polypeptide subunit II TERM 742 618937 - 618964 + G 81 -12.1 -3.21595 | gap 1, opp_overlap 618943, overlap 618943 618956 CTTGTATGCGGTAAT GGACAAGCGCCC CCTGC GGGCGCTT-TCC TTCGTGATGGCGCTT TERM 743 618943 - 618959 + G 86 -10.8 -3.97042 | opp_overlap 618943, overlap 618937 618956 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 744 618959 - 618943 - g 76 -10.8 -3.41878 | opp_overlap 618943 618937 618956 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG ybgE 618902 - 619195 + | hypothetical protein TERM 745 619216 - 619241 + F 82 -7.6 -4.57341 | opp_overlap 619217, overlap 619217 AATTCTCTTTAAAAA ATTATGGGCC GCTCCA GGCCCATAAA TTTTTACGCGCCCTT TERM 746 619217 - 619240 + F 79 -11.1 -3.33922 | opp_overlap 619217, overlap 619216 ATTCTCTTTAAAAAA TTATGGGCC GCTCCA GGCCCATAA ATTTTTACGCGCCCT TERM 747 619240 - 619217 - f 100 -11.1 -5.00884 | opp_overlap 619217 619216 ATTCTCTTTAAAAAA TTATGGGCC GCTCCA GGCCCATAA ATTTTTACGCGCCCT ybgC 619345 - 619749 + | acyl-CoA thioester hydrolase YbgC tolQ 619746 - 620438 + | colicin uptake protein TolQ tolR 620442 - 620870 + | colicin uptake protein TolR TERM 748 621305 - 621288 - g 74 -3.4 -4.93296 | gap 1, overlap 621291 TCAGGAGCAGAAAAA GCAGGCT GAAGA AGCC-GC AAAACAGGCCGAGTT TERM 749 621482 - 621466 - g 84 -3.5 -5.27923 | GAAGCGCAGAAAAAA GCCGAGG TAG CCGCTGC GGCACTGAAGAAGAA TERM 750 621524 - 621499 - g 70 -4.5 -4.46854 | overlap 621514 621515 GCACTGAAGAAGAAA GCGGAAGCGGC AGAA GCAGCTGCAGC TGAAGCAAGAAAGAA TERM 751 621644 - 621622 - g 72 -6.2 -4.32177 | overlap 621604 621603 621623 GCAGCTGATAAGAAA GCGGCAGC AGAGAAA GCTGCAGC CGACAAAAAAGCAGC TERM 752 621674 - 621655 - g 87 -4.9 -5.26316 | overlap 621656 621667 621668 GCAGCCGACAAAAAA GCAGCAG AAAAAG CGGCTGC TGATAAGGCAGCAGC TERM 753 621689 - 621667 - g 83 -6.2 -4.95806 | overlap 621655 621656 621668 621685 AAAGCAGCAGAAAAA GCGGCTGC TGATAAG GCAGCAGC TGATAAGAAAGCAGC TERM 754 621722 - 621700 - g 90 -9.8 -4.32177 | overlap 621685 621715 621717 GCAGCTGATAAGAAA GCAGCGGC AGAAAAA GCCGCCGC AGACAAAAAAGCGGC TERM 755 621740 - 621715 - g 85 -6.8 -4.84359 | overlap 621700 621717 621733 GCAGCGGCAGAAAAA GCCGCCGC AGACAAAAAA GCGGCAGC GGCAAAAGCAGCAGC TERM 756 621785 - 621733 - g 100 -8.2 -5.36441 | opp_overlap 621778, overlap 621715 621717 621748 621763 621778 621779 GCCGCAGACAAAAAA GCGGCAGCGGCAAAAGCAGCAGCT GAAAA AGCCGCTGCAGCAAAAGCTGCCGC AGAGGCAGATGATAT TERM 757 621770 - 621748 - g 91 -11.3 -4.11216 | overlap 621733 621763 GCGGCAGCGGCAAAA GCAGCAGCT GAAAA AGCCGCTGC AGCAAAAGCTGCCGC TERM 758 621791 - 621763 - g 100 -13.1 -4.63527 | opp_overlap 621778, overlap 621748 621733 621778 621779 GCAGCAGCTGAAAAA GCCGCTGCAGCAA AAG CTGCCGCAGAGGC AGATGATATTTTCGG tolA 620935 - 622176 + | cell envelope integrity inner membrane protein TolA tolB 622309 - 623601 + | translocation protein TolB pal 623636 - 624157 + | peptidoglycan-associated outer membrane lipoprotein TERM 759 624221 - 624237 + G 100 -15.1 -4.25104 | TTACTGGTTGGTATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCACC TERM 760 624419 - 624406 - g 70 -5.3 -4.29738 | TCAGATTCAGGAAAA TCAGT ATCA ACTGA ATCAGGTCGTGGAGC ybgF 624167 - 624958 + | hypothetical protein TERM 761 625001 - 624966 - f 70 -9.1 -3.4285 | opp_overlap 624970, overlap 624968 CGATGTAATGCATAA CACACGACCAGAAGT CGCATT ATTTCTGGTCGTGTC GTGCGAATCATAAGC TERM 762 624999 - 624968 - f 79 -11.7 -3.28368 | opp_overlap 624970, overlap 624966 ATGTAATGCATAACA CACGACCAGAAGT CGCATT ATTTCTGGTCGTG TCGTGCGAATCATAA TERM 763 624970 - 624997 + F 72 -10.7 -2.79302 | opp_overlap 624968 624966 GTAATGCATAACACA CGACCAGAAGT CGCATT ATTTCTGGTCG TGTCGTGCGAATCAT TERM 764 625253 - 625238 - f 72 -9 -3.52941 | AAACGTGAAGGATAA CGTTGC ATCA GCAACG GCGCCGAAGGGCGAG TERM 765 625522 - 625490 - f 100 -15.7 -3.19463 | opp_overlap 625491 625499, overlap 625491 625499 TGCACGACCCACCAA TGCAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATTCAGGCATCCTCA TERM 766 625521 - 625491 - f 100 -19.2 -2.51464 | opp_overlap 625491 625499, overlap 625490 625499 GCACGACCCACCAAT GCAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATTCAGGCATCCTC TERM 767 625491 - 625521 + F 100 -18.5 -3.03441 | opp_overlap 625491 625490 625499, overlap 625499 GCACGACCCACCAAT GCAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATTCAGGCATCCTC TERM 768 625513 - 625499 - f 100 -9.2 -5.17576 | opp_overlap 625491 625499, overlap 625491 625490 CACCAATGCAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATTCAG TERM 769 625499 - 625513 + F 100 -8.5 -5.27779 | opp_overlap 625499 625491 625490, overlap 625491 CACCAATGCAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATTCAG nadA 625737 - 626780 + | quinolinate synthetase TERM 770 627528 - 627498 - g 70 -9.7 -3.15544 | TCGGATGTGGATCAA CAGCGCACGTGAA AGAGG CTCATGCGCGCTG TCCCATTAATGGTGA pnuC 626818 - 627537 + | PnuC ybgR 628475 - 627534 - | zinc transporter ZitB TERM 771 628180 - 628169 - G 70 -4.4 -4.53034 | overlap 628178 CCCAGACAATCAAAA TGGT AATT ACCA CGAGGGCGATGGCAT TERM 772 628567 - 628548 - R 93 -9.3 -4.78661 | opp_overlap 628548 628547 AGTGAAAAATTAAAA GGGAGAG ACTCCG CTCTCCC ATTATTGGCTATTTT SBO_0608 628969 - 628589 - | putative homeobox protein TERM 773 629148 - 629160 + H 77 -3.3 -5.16071 | AGATCTCGTTTTTCG CGACA ATC TGGCG TTTTTCTTGCTAATT aroG 629285 - 630337 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 774 630450 - 630470 + T 79 -8.3 -4.208 | opp_overlap 630450 GTTAGCAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTAAAC TERM 775 630470 - 630450 - T 100 -8.3 -5.5112 | opp_overlap 630450 GTTAGCAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTAAAC gpmA 631247 - 630495 - | phosphoglyceromutase 1 TERM 776 631115 - 631130 + g 74 -6.1 -4.45664 | overlap 631113 AACCTTCCTCTTTCA GCAGC TTACCT GCTGC TTTTGCTTCGCTTAC TERM 777 631442 - 631426 - R 83 -10.1 -4.13591 | GCAATATGAGATAAA GCCCTCA TGA CGAGGGC TTAACATTACTCAGC galM 632489 - 631449 - | aldose 1-epimerase galK 633631 - 632483 - | galactokinase galT 634681 - 633635 - | galactose-1-phosphate uridylyltransferase galE 635707 - 634691 - | UDP-galactose-4-epimerase TERM 778 634945 - 634960 + g 77 -6.1 -4.65895 | TGTAGATGTGTACGC CTGGC TTGTTC GCCAG TTTTTCCATCGCCAC TERM 779 635195 - 635212 + g 70 -4.1 -4.60041 | gap 1, overlap 635197 635198 GCGCAGCAGGGCAAT GCTCCAGT CCG GCTGG-GC TTTTTGCAGATCGGT modF 637440 - 635968 - | putative molybdenum transport ATP-binding protein ModF TERM 780 636666 - 636639 - G 75 -7.1 -4.31433 | gap 1, opp_overlap 636639 636642 GATCGTTATAAGAAA CCACGCCATTGT TCAGC ACAAT-GCGCGG TTCGTTGGCGGGTAA TERM 781 637001 - 636976 - G 86 -11.1 -3.90559 | opp_overlap 636996 ATCAAGAATCAACAA GTCAGGCTCCG ACAT CAGCGCCTGAC ACAGCAGGATTTTTC TERM 782 637195 - 637209 + g 77 -6.4 -4.67904 | overlap 637196 GTTATTCCGCTGCCA TTCGTC GCT GACGAG TTTTTGCAATTGCTC modE 638296 - 637508 - | DNA-binding transcriptional regulator ModE TERM 783 637598 - 637614 + g 81 -10.9 -3.57462 | CGCTTCATTTACCGG CACTGTG GCG CACAGTG TTTGCCCGTCGGGTA SBO_0617 638425 - 638574 + | hypothetical protein TERM 784 638584 - 638601 + F 83 -6.3 -4.96501 | gap 1 CATTGATTCCCTGAA TGCCC-AC TTA GTCGGGCA TTTCTTTTTCTCAAC TERM 785 639365 - 639355 - g 72 -6.8 -4.17491 | AGCAAAGGGGTAAAA GTGG TTG CCAC CTTCCCGGAAGATTC modA 638740 - 639513 + | molybdate transporter periplasmic protein TERM 786 639900 - 639918 + G 79 -4.4 -4.97158 | overlap 639901 GCCGCAAGAACACTA GGTGCCGG GCG CTGGCGCG TTTTCTTTACTATCA modB 639513 - 640202 + | molybdate ABC transporter permease protein modC 640205 - 641263 + | molybdate transporter ATP-binding protein TERM 787 641276 - 641256 - T 71 -9.7 -3.2964 | AAAGTGTGTCGATAA CCGCCTGAT TAA ATCAGGTGG CTATAAATGAACTGG ybhA 642082 - 641264 - | phosphotransferase SBO_0622 643755 - 642934 - | IS911 ORF2 TERM 788 643342 - 643353 + g 77 -5.8 -4.63218 | opp_overlap 643338 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 789 643694 - 643714 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SBO_0623 643877 - 644152 + | IS629 ORF1 TERM 790 644472 - 644460 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_0624 644152 - 645039 + | IS629 ORF2 insB 646342 - 645839 - | IS1 ORF2 SBO_0626 646417 - 646647 + | putative IS1 encoded protein TERM 791 646767 - 646781 + F 100 -8.5 -5.64274 | opp_overlap 646767 646766 646764 GGACATTTGAAAGAG CCCGC TTTAT GCGGG TTTTTTTATACCTGA SBO_0631 647733 - 648020 + | IS600 ORF1 SBO_0632 649083 - 648196 - | IS629 ORF2 TERM 792 648763 - 648775 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_0633 649358 - 649083 - | IS629 ORF1 SBO_0634 649520 - 649729 + | IS911 ORF2 insB 650226 - 649723 - | IS1 ORF2 SBO_0636 650319 - 650609 + | putative IS1 encoded protein SBO_0637 651513 - 650800 - | IS600 ORF2 SBO_0638 651643 - 651918 + | IS629 ORF1 TERM 793 652238 - 652226 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_0639 651918 - 652805 + | IS629 ORF2 TERM 794 652899 - 652911 + G 72 -6.2 -4.42748 | opp_overlap 652892, overlap 652892 ACAAAAGCCCTCAGT GGCC CCGGA GGCC TTCTTTTTGCGATAA TERM 795 653500 - 653487 - g 70 -3.7 -4.59773 | TTTGATCCCGAAAAA GCCGC TGAT GCCGC CGCGAGAAAACTTGG SBO_0640 652860 - 653858 + | putative transglycosylase SBO_0641 653855 - 654565 + | hypothetical protein TERM 796 654741 - 654729 - f 77 -9.1 -3.9461 | opp_overlap 654739 GTGTCTGAATAATAA CCGGA TTG TCCGG TACGGATACCTGCCG TERM 797 654760 - 654771 + F 80 -5.8 -5.00616 | GGATACCTGCCGTTT CAGG GGGA CCTG TTTTTTACCGACACG SBO_0642 655391 - 655741 + | putative protein encoded within IS TERM 798 655776 - 655745 - f 72 -5.2 -4.60255 | gap 1, overlap 655746 655747 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 799 655775 - 655747 - f 71 -10.3 -2.60776 | overlap 655745 655746 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_0643 655961 - 656299 + | putative protein encoded within IS SBO_0644 656369 - 657364 + | putative protein encoded within IS TERM 800 657393 - 657362 - T 76 -7.5 -4.258 | gap 2 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CCCATGATACTGATG SBO_0645 658073 - 657351 - | IS2 ORF2 SBO_0646 658462 - 658097 - | insertion sequence 2 OrfA protein SBO_0647 658865 - 660250 + | putative tail fiber protein SBO_0648 660253 - 660798 + | putative tail fiber assembly protein SBO_0649 661822 - 661109 - | IS600 ORF2 SBO_0650 662265 - 661963 - | IS600 ORF1 SBO_0651 662419 - 663378 + | putative phage tail fiber protein SBO_0652 663455 - 663832 + | putative tail component of prophage TERM 801 663947 - 663970 + T 93 -10.2 -4.58395 | opp_overlap 663944 663943, overlap 663949 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 802 663949 - 663968 + T 100 -15 -3.90762 | opp_overlap 663944 663943, overlap 663947 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_1 665838 - 664012 - | invasion plasmid antigen TERM 803 666194 - 666236 + H 86 -8.9 -4.48072 | gap 1, opp_overlap 666189 666200 666225, overlap 666200 666225 ATGATCCAAATCATA TATCAATGTACTGTTTTTTT CTTT AAAAAAACAGTACATTC-TA TTTTATAATGACTGT TERM 804 666231 - 666200 - H 93 -14.8 -3.36349 | opp_overlap 666194 666200 666225, overlap 666189 666225 CAAATCATATATCAA TGTACTGTTTTTTT CTTT AAAAAAACAGTACA TTCTATTTTATAATG TERM 805 666200 - 666231 + H 100 -14.8 -4.04187 | opp_overlap 666200 666189 666225, overlap 666194 666225 CAAATCATATATCAA TGTACTGTTTTTTT CTTT AAAAAAACAGTACA TTCTATTTTATAATG TERM 806 666250 - 666225 - H 79 -2.7 -5.40072 | gap 1, opp_overlap 666200 666194 666225, overlap 666200 666189 TTTTCTTTAAAAAAA CAGTACATTCTA TTT TATAATG-ACTG TGTATTCCCATGGAA TERM 807 666618 - 666639 + H 74 -3.7 -4.91357 | TTGATTTAATTGTGA CGCGATG TTGTATTT TATCGCG TTTTGTTGTCTGTTT TERM 808 667675 - 667661 - g 71 -2.7 -4.7373 | CTACTGCATGAAAAA GGCCG TTATG CGGTC GGGCAGGGACCAATG ybhE 666719 - 667714 + | 6-phosphogluconolactonase TERM 809 667727 - 667750 + T 93 -15.3 -3.10053 | opp_overlap 667716 667727 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT TERM 810 667750 - 667727 - T 93 -15.3 -3.06133 | opp_overlap 667727, overlap 667716 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT SBO_0656 669038 - 668823 - | putative IS1 encoded protein insB 669113 - 669616 + | IS1 ORF2 TERM 811 669653 - 669639 - f 80 -7 -4.63527 | TCATTACCTGAAAAA GGCGTG TTT CTCGCC AGTAATAACGAAATA TERM 812 669731 - 669720 - g 93 -5.8 -5.2166 | opp_overlap 669720 GAAGAAGCCAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT ybhJ 669642 - 671879 + | hypothetical protein TERM 813 671901 - 671929 + T 76 -11.8 -2.73468 | overlap 671925 671928 CCATGTGAATGTAGG TCGCATTCGGCA CTTAT TGTCGGATGCGA TGCTTGCGCATCTTA TERM 814 671938 - 671986 + T 75 -9.5 -3.53811 | opp_overlap 671983, overlap 671925 671928 671968 671971 GATGCGATGCTTGCG CATCTTATCCGACCTACAAATCG CAT CGAACCGTAGGCCGGATAAGGCG TTTACGCCGCATCCG ybhC 673303 - 672020 - | putative pectinesterase TERM 815 673448 - 673422 - R 70 -10.2 -2.53759 | overlap 673427 AATACCTTTAAGTGA TACCAGATAGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA ybhB 673931 - 673455 - | putative kinase inhibitor protein bioA 675279 - 673990 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 816 674305 - 674317 + g 71 -9.1 -3.53012 | opp_overlap 674305 674304 GCCAGATTCGAGAAT CGCCA GGC TGGCG TTTGCAGCCGCGCAG bioB 675366 - 676406 + | biotin synthesis TERM 817 676446 - 676426 - g 76 -9.6 -3.77302 | overlap 676422 GCAGGAGAAAATCAA CGCGGCGC TCGAT GCGCGGCG TGCTGCCGATGCCCT bioF 676403 - 677557 + | 8-amino-7-oxononanoate synthase bioC 677544 - 678299 + | biotin biosynthesis protein BioC bioD 678292 - 678969 + | dithiobiotin synthetase TERM 818 679765 - 679750 - g 72 -4.6 -4.63218 | opp_overlap 679751, overlap 679751 TTGCGCCCAACAAAA CGCTGG CGGC CCAGCT GTATGGCGAAATGAA TERM 819 680356 - 680346 - g 70 -6.8 -4.1421 | GAGATCAAAGAAGAA CTGG CCG CCAG ACGCAAAGTGCTGTT TERM 820 680399 - 680385 - g 75 -5.7 -4.67697 | overlap 680378 680387 TTGGAAAACAACAAA CTGCT GGAAG AGCAG CGGCTGACCCAGCGT uvrB 679548 - 681569 + | excinuclease ABC subunit B TERM 821 681631 - 681607 - T 72 -8.5 -3.79633 | opp_overlap 681606, overlap 681605 GACAAACGGAAAACA GCCTGATGCGC TAC GCTTATCAGGC CTACATTTTCTCCGC TERM 822 681660 - 681717 + T 100 -15.5 -3.12482 | opp_overlap 681683 681684, overlap 681660 GCAATATATTGAATT TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCA CTTTGTCTTCAATAG TERM 823 681660 - 681718 + T 87 -9.5 -4.21607 | gap 1, opp_overlap 681683 681684, overlap 681660 GCAATATATTGAATT -TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCAC TTTGTCTTCAATAGG ybhK 682669 - 681761 - | putative structural protein moaA 683066 - 684055 + | molybdenum cofactor biosynthesis protein A moaB 684077 - 684589 + | molybdopterin biosynthesis, protein B moaC 684592 - 685077 + | molybdenum cofactor biosynthesis protein C moaD 685070 - 685315 + | molybdopterin synthase small subunit TERM 824 685589 - 685599 + G 75 -5.4 -4.61231 | GGAATTATGGCCGGG CGAT GAA ATCG TTTTTGCCGGTGTCA MoaE 685317 - 685769 + | molybdopterin synthase large subunit ybhL 685906 - 686610 + | hypothetical protein TERM 825 686630 - 686648 + F 88 -8.1 -4.90302 | opp_overlap 686628 686630 TTTTCACCATCAATA TCCCGGC CATGT GTCGGGA TTTCTTTTCTTACTA insB 687387 - 687890 + | IS1 ORF2 TERM 826 687913 - 687940 + T 71 -3.4 -4.76041 | gap 1 TCATTACCCCATTAT CATTGTGTTCAGC ACT GC-GGGCGCGATG TTTTTAATCAGTATG ybhN 689217 - 688342 - | hypothetical protein TERM 827 689047 - 689061 + g 90 -11.4 -3.86015 | opp_overlap 689037 689035 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA TERM 828 690588 - 690625 + H 78 -6.2 -4.62783 | gap 1, overlap 690591 690591 AAAGGTGTCGCCATG TCCGCAGCGGCAACGCG GTTGG CGCGCTGGCGCTG-GCA TTTTTGACGTAGATC TERM 829 690591 - 690624 + H 70 -8.8 -3.37188 | gap 1, overlap 690588 690591 GGTGTCGCCATGTCC G-CAGCGGCAACGCG GTTGG CGCGCTGGCGCTGGC ATTTTTGACGTAGAT TERM 830 691724 - 691766 + G 71 -9 -3.44848 | overlap 691724 691726 691729 AAACAACTTTTTGCT GGCAATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTAGTG TCTTTGCTGGCGAAA TERM 831 691726 - 691764 + G 95 -13.8 -3.29704 | overlap 691724 691724 691729 ACAACTTTTTGCTGG CAATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTAG TGTCTTTGCTGGCGA TERM 832 691729 - 691761 + G 85 -14.1 -2.82279 | overlap 691726 691724 691724 ACTTTTTGCTGGCAA TTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGG TAGTGTCTTTGCTGG ybhQ 691419 - 691829 + | hypothetical protein ybhR 692897 - 691791 - | hypothetical protein TERM 833 692723 - 692757 + g 70 -10 -3.21912 | GCTCCACCGAATGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTAGTCACTTCCAGC ybhS 694041 - 692908 - | hypothetical protein ybhF 695770 - 694034 - | putative ATP-binding component of a transport system TERM 834 695528 - 695549 + g 93 -8.7 -4.88407 | gap 1, opp_overlap 695522, overlap 695528 695530 CGGCATATAGCCGAG C-ACGGCGTG CAG CGCGCCGTCG TTTTTGATTGGATCA TERM 835 695530 - 695546 + g 80 -11.5 -3.32518 | opp_overlap 695522, overlap 695528 695528 GCATATAGCCGAGCA CGGCGTG CAG CGCGCCG TCGTTTTTGATTGGA SBO_0683 696761 - 695763 - | hypothetical protein ybiH 697444 - 696761 - | putative DNA-binding transcriptional regulator TERM 836 697375 - 697387 + g 81 -4.8 -5.09173 | opp_overlap 697361 697362 ACTGCGCCAGTGCGG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 837 697445 - 697468 + H 73 -9.8 -3.36878 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCCATAGG TERM 838 698979 - 698942 - g 85 -6.9 -4.86033 | gap 1, overlap 698943 698969 698970 AAACCTGCAGAAAAA CCGTCTCGCCGCCTCGGC GAT GCCAAACCGGC-AGGCGA ACAACAACGTCGCCG rhlE 697661 - 699025 + | ATP-dependent RNA helicase RhlE TERM 839 699145 - 699176 + T 75 -10 -3.53012 | opp_overlap 699155, overlap 699146 TTGCATGCTTTTGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTCACAACAAGCAC TERM 840 699146 - 699175 + T 81 -13.5 -2.71712 | opp_overlap 699155, overlap 699145 TGCATGCTTTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTCACAACAAGCA ybiA 699739 - 699257 - | hypothetical protein TERM 841 700114 - 700091 - g 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT GAGT ACCGCCAACG TGGCGTTGCAGGATC dinG 699859 - 702009 + | ATP-dependent DNA helicase DinG TERM 842 701992 - 702005 + F 71 -9.5 -3.25223 | opp_overlap 701988 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 843 702065 - 702092 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 702065 702063 702061 702084 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC ybiB 702037 - 702999 + | hypothetical protein TERM 844 703011 - 703034 + F 95 -12.5 -4.07568 | TTAATTCTTTTCTCA GCCGGATGA GCCATG TCATCCGGC TTTTACCCCACCGCA ybiC 703140 - 704225 + | hypothetical protein TERM 845 704252 - 704231 - T 100 -13.7 -5.47821 | AGCCAGCTAAAAAAA GCCCGTCCA GTAA CGGACGGGC AAACAAGGGTAATAT TERM 846 704376 - 704409 + T 70 -9.5 -3.07344 | opp_overlap 704386 704388 704389, overlap 704388 704389 GGTTCGGATTTTGTA GGCCTGATAAGACGC GGTA GCGTCGCATCAGGCA TCTGTTGCCGGATGC TERM 847 704388 - 704436 + T 82 -11.6 -3.37796 | opp_overlap 704386 704388 704389, overlap 704376 704389 GTAGGCCTGATAAGA CGCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 848 704389 - 704435 + T 90 -15.1 -2.62463 | opp_overlap 704386 704388 704389, overlap 704376 704388 TAGGCCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG TERM 849 704435 - 704389 - T 70 -10.7 -2.5294 | opp_overlap 704376 704389 704388, overlap 704386 704388 TAGGCCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG ybiJ 704713 - 704453 - | hypothetical protein TERM 850 704586 - 704604 + g 71 -3.1 -4.79657 | overlap 704572 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 851 704763 - 704778 + r 89 -4 -5.75342 | overlap 704764 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTTCGAGAGA ybiI 705244 - 704978 - | hypothetical protein ybiX 705995 - 705318 - | putative hydroxylase TERM 852 705398 - 705414 + g 79 -3.7 -5.04175 | overlap 705400 TTTCACCATAGCGGC TTTTCAG CGA CTGAATA TTTTTGTCTAGTTCA TERM 853 706029 - 706012 - R 100 -12.7 -4.58283 | CAATTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ATCTGAATCAGAAAT TERM 854 707646 - 707661 + r 70 -2.4 -5.03145 | TTTTTGACTTTGTCG CGTCCG GCAT CGTGCG TTTTTTCGCCCATTA TERM 855 707978 - 707968 - R 71 -6.8 -4.07124 | CACCACGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 856 708029 - 708058 + r 89 -9.3 -4.59109 | overlap 708031 ACCCACGCCGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 857 708031 - 708056 + r 100 -16.3 -3.90762 | overlap 708029 CCACGCCGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_0693 708678 - 708040 - | IS4 orf SBO_0694 709387 - 708797 - | IS4 orf TERM 858 709377 - 709402 + g 73 -9.1 -3.61398 | opp_overlap 709377 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 859 709402 - 709377 - G 100 -9.8 -5.61596 | opp_overlap 709377 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 860 710008 - 709987 - H 74 -7.3 -4.23434 | opp_overlap 709987 CAAAACAGGCGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT ybiN 710477 - 711484 + | putative SAM-dependent methyltransferase ybiO 713706 - 711544 - | hypothetical protein TERM 861 713056 - 713081 + g 74 -11.1 -3.18264 | overlap 713063 TTGGAAAGCGATGGT GCGACTGCCTG CATT CAGGTTGTCGC TTAATACCTGGCCGA TERM 862 713555 - 713568 + g 100 -4.5 -6.11243 | gap 1, overlap 713547 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTTGTTCGAT SBO_0699 714980 - 713784 - | ISSfl2 ORF TERM 863 714817 - 714842 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 714797, overlap 714803 714818 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT glnQ 716138 - 715416 - | glutamine ABC transporter ATP-binding protein glnP 716794 - 716135 - | glutamine ABC transporter permease protein glnH 717679 - 716933 - | glutamine ABC transporter periplasmic protein TERM 864 717798 - 717788 - R 80 -6.8 -4.59109 | opp_overlap 717787 717788 GAGATGCGGCAAAAA CGTG ATG CACG ATTTATAGGGCAATA TERM 865 717865 - 717823 - R 80 -12.8 -3.06315 | opp_overlap 717830 717864, overlap 717860 GCAATACCCTGAAGA TGCACCATTCTGGGGCACCA ATC TGGTGCGCTAAAATTGTGCA CTCAACACAGTGATT TERM 866 717926 - 717907 - R 77 -3.6 -5.16237 | opp_overlap 717907 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATGTGGAT TERM 867 718020 - 718042 + r 79 -7.6 -4.40804 | opp_overlap 718021, overlap 718021 GGGCTGCAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGGGTACTA TERM 868 718021 - 718041 + r 77 -11.1 -3.24 | opp_overlap 718021, overlap 718020 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT TERM 869 718041 - 718021 - R 100 -13.3 -5.07652 | opp_overlap 718021 718020 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT dps 718586 - 718083 - | DNA starvation/stationary phase protection protein Dps TERM 870 718490 - 718505 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTGTC TERM 871 718876 - 718847 - R 95 -13.1 -3.96827 | opp_overlap 718844, overlap 718870 AAAAGTAGCGAGAAA TTCTGCATGGTTA TGCA TAACCATACAGAA ATGTAAATTTAATTA ybiF 719772 - 718885 - | threonine and homoserine efflux system TERM 872 719964 - 719948 - H 79 -9.5 -3.72315 | opp_overlap 719947 719948, overlap 719946 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 720125 - 720640 + | outer membrane protein X TERM 873 720656 - 720685 + T 93 -10.1 -4.70879 | opp_overlap 720662, overlap 720662 TCACTTTGGTGATAT AAAAAATCCGCCT CTCG GGGCGGATTTTTG TTTTTAAGGTTTCGG TERM 874 720662 - 720679 + T 100 -9.1 -5.61881 | opp_overlap 720662, overlap 720656 TGGTGATATAAAAAA TCCGCCT CTCG GGGCGGA TTTTTGTTTTTAAGG TERM 875 720679 - 720662 - T 100 -8.4 -5.36441 | opp_overlap 720662 720656 TGGTGATATAAAAAA TCCGCC TCTCGG GGCGGA TTTTTGTTTTTAAGG ybiP 722272 - 720689 - | putative enzyme TERM 876 721088 - 721113 + g 70 -4.7 -4.50159 | TAAATCGTCCGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTCGATTGCA TERM 877 722243 - 722228 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGATTCTTTG TERM 878 722523 - 722546 + H 76 -8.1 -4.05322 | opp_overlap 722525, overlap 722525 ATAAAAGCAGGAGTG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCTGAAGGTTT TERM 879 722525 - 722544 + H 79 -10.7 -3.615 | opp_overlap 722525, overlap 722523 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCTGAAGGT TERM 880 722544 - 722525 - H 74 -10.7 -3.12803 | opp_overlap 722525 722523 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCTGAAGGT SBO_0707 722858 - 723325 + | manganese transport regulator MntR TERM 881 723583 - 723595 + G 70 -6.9 -4.04319 | overlap 723577 ATGTTTATGGTGCTG GCGGC GGC GCTGC TTTCTACCTTTCTGA ybiR 723322 - 724440 + | hypothetical protein TERM 882 724454 - 724482 + T 75 -11.1 -2.95113 | opp_overlap 724459, overlap 724459 AGGGTCTGGCAAATA AAAAAGGCGGATT ATG AGTCCGCCTTTTG CTTTAAGTTTTGAAG TERM 883 724477 - 724459 - T 100 -8.8 -5.63517 | opp_overlap 724454 724459 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTTGCTTTAAGTTT TERM 884 724459 - 724477 + T 95 -11 -4.59424 | opp_overlap 724459, overlap 724454 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTTGCTTTAAGTTT ybiS 725419 - 724499 - | hypothetical protein TERM 885 724924 - 724950 + g 70 -3.5 -4.62069 | opp_overlap 724911, overlap 724925 724927 CAGCCGGAAGCGGTT CGCCCGCAGCG CGGTA CTCTGCGTGCA TTTTTGCGGTCGGCG ybiT 725638 - 727230 + | putative ATP-binding component of a transport system TERM 886 727315 - 727291 - T 72 -8.5 -3.79633 | overlap 727289 GACAAATGCAAAATA GCCTGATGCGC TAC GCTTATCAGGC CTACGCAGTACCTGT ybiU 728736 - 727471 - | hypothetical protein TERM 887 727574 - 727584 + g 88 -8.2 -4.62069 | TGCGGGAAGTCGCCC GGCG ATG CGCC TTTTTCCAGTGCGGC TERM 888 728116 - 728079 - G 100 -13.4 -4.08394 | overlap 728067 728080 AGACGTTGGCGAAAA CGCGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGCC CCGGAGTCGGTATGC TERM 889 728115 - 728080 - G 100 -16.9 -3.04715 | overlap 728079 GACGTTGGCGAAAAC GCGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGC CCCGGAGTCGGTATG TERM 890 728879 - 728861 - R 100 -11.7 -4.43173 | AAAAAGAAGGGAAAA CCGGAGC GCACG GCTCCGG TAGAGAGGTCAGCTG SBO_0712 729703 - 728888 - | hypothetical protein ybiW 732281 - 729849 - | putative formate acetyltransferase TERM 891 730136 - 730148 + g 71 -9.1 -3.53012 | opp_overlap 730134 CGCCGCCGAGAATCG CTGCC GTA GGCAG TTTACCCACCGAGCC TERM 892 731832 - 731846 + g 71 -2.8 -4.77438 | CGCTTTAATGATTCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT ybiY 733213 - 732287 - | putative pyruvate formate-lyase 2 activating enzyme TERM 893 732552 - 732565 + g 79 -3.7 -5.11033 | overlap 732549 ATAATGATTTTTTTG CCCGC TGCG GCGAG TTTTTTCAGGTTATC TERM 894 732748 - 732731 - G 76 -12.7 -2.52834 | overlap 732730 TACCGCAGTATGAAT GCCTGCC TCGT GGCAGGC TTGCAGTAGCGCCGT TERM 895 733839 - 733823 - g 72 -5 -4.60041 | overlap 733800 AGCGAGTTTCAAAAA CCCGCG TCAGG CGCTGG ACTGCTTACTGGCAG mipB 733317 - 733979 + | fructose-6-phosphate aldolase TERM 896 734012 - 734032 + T 82 -11.1 -3.50393 | TCATAAATTGCTGAT GACGTGGCG GAG TGCCGCGTC TTATCTGGCCTGGAG moeB 734804 - 734055 - | molybdopterin biosynthesis protein MoeB TERM 897 734143 - 734174 + g 79 -10.1 -3.79668 | opp_overlap 734135 TACATGACGATTTTC CCGCTGGCCGGTT TGCCAT AACCTGCCAGCAG TTTGATCGCTTCCAT moeA 736039 - 734804 - | molybdopterin biosynthesis protein MoeA TERM 898 735148 - 735136 - G 78 -10.5 -3.53444 | TCAGCGTCGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 899 735342 - 735332 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGGGGATCGT TERM 900 735506 - 735496 - G 87 -4.6 -5.252 | CACCGGTAGAAAAAA GCGC TAC ACGC ACTTTACGAATCACC TERM 901 735948 - 735936 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG TAC CAGTG GCAGCGTTTCCTGGG TERM 902 736907 - 736921 + G 70 -5.6 -4.30719 | opp_overlap 736908, overlap 736908 GATGCTACGCCAATA ACGCCA GTG TGGCGG TTTCTTGTACCGGCA TERM 903 736920 - 736908 - g 73 -9.1 -3.65224 | opp_overlap 736907 736908 ATGCTACGCCAATAA CGCCA GTG TGGCG GTTTCTTGTACCGGC ybiK 736243 - 737208 + | L-asparaginase TERM 904 737488 - 737516 + G 75 -11.7 -2.84325 | opp_overlap 737475 737466 737487 737488, overlap 737484 GAGCGCTGCACAAAT GCGCCATGTTCGC GGT GCGGATATGGCGA TGATATTTCAGGAGC TERM 905 737723 - 737699 - g 77 -11.4 -3.15544 | opp_overlap 737695 737713 CGTTATCCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG SBO_0719 737228 - 739066 + | glutathione transporter ATP-binding protein TERM 906 740554 - 740538 - g 71 -3 -4.82901 | gap 1, overlap 740540 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG SBO_0720 739086 - 740624 + | putative transport protein TERM 907 741467 - 741479 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT SBO_0721 740642 - 741562 + | putative transport system permease protein SBO_0722 741565 - 742476 + | putative transport system permease protein TERM 908 742616 - 742587 - f 78 -6.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACTATTT TTGCAGCGGC ACAGCGTTCAGATAG SBO_0723 742654 - 743463 + | hypothetical protein insB 743686 - 744189 + | IS1 ORF2 TERM 909 744246 - 744233 - g 71 -2.3 -4.95484 | CATCATGAAAGAAAA TGGCC TGAA GGCGA ACAGCCTCTGTGTTG SBO_0725 744222 - 744647 + | hypothetical protein TERM 910 744686 - 744697 + G 79 -4.4 -4.95806 | overlap 744695 AGTTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT TERM 911 745175 - 745156 - g 74 -7.8 -4.11216 | opp_overlap 745170 745172 745174 TCTTTACTGTCAAAA TCGCTGGC GATG GACAGCGA GAACCTGATGTTCTC TERM 912 745220 - 745210 - g 72 -8.2 -3.72051 | overlap 745203 TTTAAGAACGGTAAA CCGG TGA CCGG TGATGAATATAATGC TERM 913 745766 - 745748 - g 70 -5.3 -4.41177 | gap 1, opp_overlap 745756, overlap 745741 745752 TAGATAAAGGTAAAA TCTACCGC TTCG GCGGT-GA CGAATTTGCGGTGAT SBO_0726 744655 - 745983 + | hypothetical protein TERM 914 746032 - 745984 - T 71 -9.8 -3.1505 | gap 1, opp_overlap 745968 745992 745996, overlap 745987 ATTAGCTGGCAGTAA TCATTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAATTA AACCCGGCTACCCCA TERM 915 746029 - 745987 - T 74 -11.5 -2.78018 | gap 1, opp_overlap 745992 745996, overlap 745984 AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC TERM 916 745992 - 746025 + T 73 -9.5 -3.33696 | opp_overlap 745987 745984, overlap 745996 GCAGTAATCATTATT CGCAGGCCGGACAAA TGAT TTTGCCCGGCCTGAA TTAATTAAACCCGGC TERM 917 745996 - 746021 + T 81 -13.3 -2.60244 | opp_overlap 745987 745984, overlap 745992 TAATCATTATTCGCA GGCCGGACAAA TGAT TTTGCCCGGCC TGAATTAATTAAACC yliG 747355 - 746030 - | hypothetical protein TERM 918 747335 - 747323 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 747568 - 747951 + | biofilm formation regulatory protein BssR TERM 919 747947 - 747991 + T 76 -5 -4.84359 | opp_overlap 747955 747959, overlap 747955 747956 747959 CCATGCTTGAGAAGG CCTGAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 920 747983 - 747955 - T 83 -9.6 -4.12198 | opp_overlap 747955 747947 747956 747959, overlap 747959 GAGAAGGCCTGAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 921 747956 - 747983 + T 72 -9.3 -3.59063 | gap 1, opp_overlap 747955 747959, overlap 747955 747947 747959 AGAAGGCCTGAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 922 747959 - 747979 + T 88 -12.6 -3.48703 | opp_overlap 747955 747959, overlap 747956 747955 747947 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 923 747979 - 747959 - T 93 -12.6 -3.67175 | opp_overlap 747959 747956 747955 747947, overlap 747955 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT SBO_0729 749131 - 748226 - | insertion element IS2 transposase InsD SBO_0730 749454 - 749089 - | insertion sequence 2 OrfA protein SBO_0731 750249 - 749530 - | IS2 ORF2 SBO_0732 750638 - 750273 - | insertion sequence 2 OrfA protein TERM 924 751199 - 751211 + G 77 -2.7 -5.16841 | CGGCTGGTATTCGAC GGTAA AGG TTATC TTTTTATTGCTCTGG TERM 925 751495 - 751480 - g 71 -2.4 -4.92239 | overlap 751484 GCAAAAAGGCAAAAA CTACGG CTGG CCGCTG GCAACCTGGGGAATC yliI 750734 - 751849 + | putative dehydrogenase yliJ 752424 - 751846 - | putative transferase TERM 926 752750 - 752765 + r 84 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT TERM 927 753945 - 753921 - R 82 -12.1 -3.30159 | opp_overlap 753921 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT TERM 928 753921 - 753945 + r 90 -13.6 -3.39862 | opp_overlap 753921 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT deoR 754714 - 753956 - | DNA-binding transcriptional repressor DeoR TERM 929 754466 - 754477 + g 79 -3.6 -5.06414 | overlap 754468 TGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG ybjG 755368 - 754772 - | undecaprenyl pyrophosphate phosphatase TERM 930 755150 - 755140 - G 72 -5.4 -4.56597 | overlap 755142 GGTCGTGCGGAAAAA GATG TCC CATC GTCCAGGACACAAAC cmr 755675 - 756883 + | proton motive force efflux pump TERM 931 756915 - 756889 - T 100 -8.7 -5.47399 | opp_overlap 756889 CGAAGGGTAAAAAAA TGCCTGACTGC TTTGT GCGATCAGGCA TTCTCGAATTAATGG ybjH 757208 - 756924 - | hypothetical protein SBO_0740 758082 - 757294 - | hypothetical protein SBO_0741 759317 - 758109 - | putative DEOR-type transcriptional regulator TERM 932 758897 - 758884 - G 71 -3.1 -4.85599 | gap 1 CCCAGGCTATAAAAA CCG-TG CAT CATCGG CAAAACCGTTTTATT SBO_0742 759401 - 759937 + | putative DEOR-type transcriptional regulator TERM 933 759979 - 759964 - T 100 -4 -5.9218 | TAGATAACAAAAAAA CCATTT ATGT AAACGG GTTAATGAAAACAAT TERM 934 760022 - 760071 + T 71 -7.9 -3.87869 | gap 1, overlap 760023 AAACAATAAGTTAGG TTGGTGGTCAGTGGTGGTTATTAC GGG GTAATGCCAACCGCTG-CCGCCAC TTTGTCGCCACTTGG TERM 935 760023 - 760070 + T 74 -11.4 -2.924 | gap 1, overlap 760022 AACAATAAGTTAGGT TGGTGGTCAGTGGTGGTTATTAC GGG GTAATGCCAACCGCTG-CCGCCA CTTTGTCGCCACTTG SBO_0743 761083 - 760244 - | IS911 ORF2 TERM 936 760652 - 760663 + g 77 -5.8 -4.63218 | opp_overlap 760648 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 937 761004 - 761024 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SBO_0744 762121 - 761234 - | IS629 ORF2 TERM 938 761801 - 761813 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_0745 762396 - 762121 - | IS629 ORF1 insB 763017 - 762514 - | IS1 ORF2 SBO_0747 763110 - 763292 + | putative IS1 encoded protein SBO_0748 764052 - 763483 - | repressor protein TERM 939 764053 - 764069 + H 72 -5.1 -4.66938 | overlap 764055 TTTCTCCAAATTCAT GGTCACT CCA AGTGAAC TTTTATCTTGACGAT SBO_0749 764178 - 764399 + | hypothetical protein TERM 940 765089 - 765069 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 941 765441 - 765430 - g 77 -5.8 -4.63218 | opp_overlap 765435 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_0750 765010 - 765849 + | IS911 ORF2 TERM 942 765981 - 765995 + G 74 -7.8 -4.07868 | overlap 765982 CCTGTATCTCAATCG TCACGG TTA CCGTGG TTTATGTCGCTATAA TERM 943 766106 - 766096 - g 75 -4.6 -4.84359 | GCATTTGCAGAAAAA GCCC AGC GAGC AACGTTTATCTGCGC SBO_0751 765949 - 766497 + | putative DNA adenine methylase TERM 944 766593 - 766611 + G 81 -10.2 -3.95219 | overlap 766605 AACCCTTATCTGGAC CCGGCGGA AGT TGCGCCGG TTTCTGCGCTTTCAA TERM 945 767606 - 767619 + G 72 -5.9 -4.386 | opp_overlap 767603 767602, overlap 767603 767602 TATCGCGGAAATGCG CGGTG ACTG CGCCG TTTTCTACACCATTA SBO_0752 766494 - 768908 + | endonuclease SBO_0753 769189 - 769494 + | putative damage-inducible protein TERM 946 769630 - 769649 + F 100 -15 -4.20084 | ATCGTTTTTGCTAAG GCCCGCCA GAAC TGGCGGGC TTTTGCGTAGATCAT TERM 947 769828 - 769804 - g 81 -4.5 -5.10461 | opp_overlap 769811 GTTAGTCAAGAAAAA TAAAAATTATA GTT TATATTTTTTA ATTACAAATAATCAA TERM 948 769811 - 769821 + G 79 -2.6 -5.26875 | opp_overlap 769804 AAGAAAAATAAAAAT TATA GTT TATA TTTTTTAATTACAAA TERM 949 771341 - 771331 - g 93 -4 -5.48163 | AAATAAAGTAAAAAA CAAT ATA ATTG CAAAGAATATGTCTT SBO_0754 769787 - 771436 + | putative phage-related protein SBO_0755 771438 - 772301 + | putative phage-related protein SBO_0756 772752 - 772408 - | capsid portal protein SBO_0757 773439 - 772843 - | capsid portal protein TERM 950 773409 - 773419 + g 77 -8.2 -4.04071 | overlap 773404 GGGTCTGTTTCGTCG CCGC AGC GCGG TTCTTCTTACTCTTT SBO_0758 775205 - 773439 - | terminase, ATPase subunit TERM 951 775936 - 775918 - g 77 -3.1 -5.14563 | gap 1 CTGTTTACCAAAAAA GAGCAGTC CGAT GAC-GCCC GGTTCTCTGATGTGC SBO_0759 775348 - 776181 + | putative capsid scaffolding protein TERM 952 776690 - 776677 - g 70 -5.9 -4.19704 | CAACCGTAGCGAAAA CCCGC TGCT GCAGG ATGTGAATAAAGGCT TERM 953 776992 - 776966 - g 81 -5.8 -4.80396 | overlap 776956 GAAAACAGTGAAAAA CTGGCTGCCGAT ATG ATCATCAGTCAG AAACGCATGGGTGGC SBO_0760 776198 - 777256 + | major capsid protein SBO_0761 777260 - 777910 + | terminase, endonuclease subunit TERM 954 777940 - 777916 - f 93 -13.6 -3.48593 | gap 1 CAGCCGCTGACAGAA CGTGCC-CCCG CGCA CGGGCGGCACG GGGTGGCGAAAGGCA SBO_0762 778006 - 778470 + | putative capsid completion protein SBO_0763 778470 - 778673 + | phage tail protein nucE 778677 - 778892 + | secretory protein SBO_0765 778873 - 779385 + | putative lysozyme protein R of prophage CP-933K SBO_0766 779387 - 779764 + | hypothetical protein TERM 955 779894 - 779882 - g 86 -9.1 -4.3467 | AGCTGCAGAGCAAAA GCCAG GCA CTGGC AAAGAGCAACAGCCA SBO_0767 779761 - 780189 + | putative regulatory protein SBO_0768 780285 - 780716 + | putative phage tail protein TERM 956 780856 - 780831 - g 82 -11.3 -3.46563 | gap 1, opp_overlap 780823 GACACAGCAGCAGAA CATCAGGA-TGC AGC GCAATCCTGATG GCAGCAGTTATGAGC SBO_0769 780709 - 781152 + | putative phage tail protein SBO_0770 781332 - 781156 - | putative IS1 encoded protein insB 781425 - 781928 + | IS1 ORF2 SBO_0772 782452 - 782015 - | hypothetical protein TERM 957 782275 - 782285 + g 77 -3.2 -5.14563 | GTATTAGTGCCCATG TGGG TAA TCCA TTTTTTCCTGCAACA pin 782871 - 783437 + | inversion of adjacent DNA; at locus of e14 element SBO_0774 783580 - 784752 + | major tail sheath protein SBO_0775 784762 - 785277 + | major tail tube protein SBO_0776 785332 - 785634 + | putative phage tail protein TERM 958 785835 - 785861 + G 73 -11.7 -2.62396 | gap 1 CCCATTTCGATCCGC GCAGGCCAGTTC AAGA GAACTGGC-TGC TGCTGTCAAAAAATC TERM 959 786112 - 786102 - g 86 -6.8 -4.88388 | overlap 786103 AGAACGCCAGAAAAA GCTG CAG CAGC AGACGGCGCTTGTGC TERM 960 788511 - 788487 - g 83 -9.9 -4.07885 | CATCGTCGGTGAAAA CGGGCCGGAAA TTG TTAACGGCCCG GCAAATGTGACCAGC SBO_0777 785761 - 788838 + | putative bacteriophage tail protein SBO_0778 788835 - 789320 + | putative bacteriophage tail protein TERM 961 790236 - 790191 - g 72 -6.9 -4.18762 | gap 1, opp_overlap 790202 790206 AACGGGCAGCGAAAA TGCAGTGGGAACGCCTGCAACG CGG CGTTGCAT-CATTCTCGCTACA ACTGGCGGAAGGGCG TERM 962 790206 - 790222 + G 71 -10.9 -2.8474 | opp_overlap 790191, overlap 790202 TGCAGTGGGAACGCC TGCAACG CGG CGTTGCA TCATTCTCGCTACAA SBO_0779 789317 - 790417 + | putative bacteriophage late gene regulator SBO_0780 790475 - 790726 + | putative bacteriophage late gene regulator TERM 963 790849 - 790813 - T 85 -3.7 -5.60689 | TCAGACAACAAAAAA CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG CTCCACAAAATGGGG TERM 964 790908 - 790878 - T 74 -3.3 -4.97158 | gap 1, opp_overlap 790905 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG SBO_0781 792648 - 790963 - | hypothetical protein TERM 965 791547 - 791533 - G 83 -10 -4.09108 | opp_overlap 791532 791531 791529 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACGCG TERM 966 791813 - 791852 + g 72 -7.8 -3.85817 | GGATCGAGTCGGGCA TGGGCGTCGGGATAGCCT ACCA ACGCTATTTCATCGCCCA TTTGTAGCACGGCAT ybjM 792918 - 793295 + | hypothetical protein TERM 967 793321 - 793289 - T 90 -6.9 -5.40625 | opp_overlap 793297, overlap 793297 ACAGCACAGAAAAAA TCAGTAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 968 793313 - 793297 - T 80 -10.1 -3.98747 | opp_overlap 793297, overlap 793289 GAAAAAATCAGTAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG TERM 969 793325 - 793337 + T 71 -3.3 -4.87133 | opp_overlap 793325 GGGCTTGTCAGACGA TCAGG CGT CCAGA TTTTCTTTCACCCAT grxA 793582 - 793325 - | glutaredoxin 1 ybjC 793742 - 794029 + | hypothetical protein mdaA 794013 - 794735 + | nitroreductase A TERM 970 795258 - 795315 + G 95 -14.2 -3.40522 | gap 1, opp_overlap 795280, overlap 795260 795261 795280 GGCGTCGTGCTGGCG GAGACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCATA TTCTGGTGCAGGAAT TERM 971 795260 - 795313 + G 100 -16.8 -3.27475 | gap 1, opp_overlap 795280, overlap 795258 795261 795280 CGTCGTGCTGGCGGA GACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 972 795261 - 795312 + G 100 -20.3 -2.56271 | gap 1, opp_overlap 795280, overlap 795260 795258 795280 GTCGTGCTGGCGGAG ACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 794796 - 795698 + | ribosomal protein S6 modification protein ybjN 795786 - 796262 + | putative sensory transduction regulator TERM 973 796555 - 796537 - f 75 -3.2 -5.24129 | opp_overlap 796537 CGCGCCGATAAAAAA TATGCA CGTTTAT TGCATA TCTTTTAGTATGACA TERM 974 797582 - 797570 - g 72 -6.9 -4.20918 | GCCAACGCCAATAAA GCAGC CAC GCCGC TGGTGAGTGCGGAAG potF 796613 - 797725 + | putrescine ABC transporter periplasmic substrate-binding protein TERM 975 798387 - 798368 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 797820 - 798953 + | putrescine transporter ATP-binding subunit potH 798963 - 799916 + | putrescine ABC transporter membrane protein TERM 976 800454 - 800464 + G 71 -3.2 -4.81083 | ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTCGTCATTACG potI 799913 - 800758 + | putrescine ABC transporter membrane protein TERM 977 800788 - 800812 + F 95 -12.2 -4.25104 | opp_overlap 800791, overlap 800791 GCCAACCTGGCTACA TAATGCCGCG CATGC CGCGGCATTG TTTTCATGGAAGACG TERM 978 800809 - 800791 - f 86 -11.7 -3.48772 | opp_overlap 800788 800791 AACCTGGCTACATAA TGCCGCG CATGC CGCGGCA TTGTTTTCATGGAAG TERM 979 800791 - 800809 + F 95 -11.7 -4.25256 | opp_overlap 800791, overlap 800788 AACCTGGCTACATAA TGCCGCG CATGC CGCGGCA TTGTTTTCATGGAAG ybjO 800818 - 801306 + | hypothetical protein rumB 801347 - 802474 + | 23S rRNA methyluridine methyltransferase TERM 980 802492 - 802479 - T 100 -9.5 -5.5604 | TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTCAGATTGCTGATC artJ 803380 - 802649 - | arginine 3rd transport system periplasmic binding protein TERM 981 802998 - 803022 + g 77 -7.2 -4.46757 | opp_overlap 802998 TTTTCCATCCCAATA CGTTTGCC TTTCAGATC GGCAAACG TTTTGTAGGTATCTT TERM 982 803530 - 803502 - R 89 -6 -5.74086 | opp_overlap 803503, overlap 803503 AAATGAAATAAAAAA CGACGGATAACT TAGTG AGTTGTCCGTCT TCATTATAAGAATTT TERM 983 803503 - 803529 + r 85 -12.4 -3.4489 | opp_overlap 803502 803503 AATGAAATAAAAAAC GACGGATAACTT AGT GAGTTGTCCGTC TTCATTATAAGAATT TERM 984 803529 - 803503 - R 80 -9.5 -4.00791 | opp_overlap 803503, overlap 803502 AATGAAATAAAAAAC GACGGATAACT TAGTG AGTTGTCCGTC TTCATTATAAGAATT artM 804339 - 803671 - | arginine transporter permease subunit ArtM artQ 805055 - 804339 - | arginine transporter permease subunit ArtQ TERM 985 804891 - 804864 - G 70 -5.6 -4.33956 | gap 1, overlap 804866 804869 GCCAAAATAGATAAA CAGCACTACCAGA ATT TCTGGCAG-GCCA CGCAGAATGGTTACC TERM 986 804889 - 804866 - G 72 -8.2 -3.75733 | gap 1, overlap 804864 804869 CAAAATAGATAAACA GCACTACCAGA ATT TCTGGCAG-GC CACGCAGAATGGTTA TERM 987 805011 - 805001 - G 74 -8.2 -3.99898 | opp_overlap 805007, overlap 805002 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 805793 - 805062 - | arginine 3rd transport system periplasmic binding protein artP 806539 - 805811 - | arginine transporter ATP-binding subunit SBO_0799 807398 - 807721 + | hypothetical protein SBO_0800 807718 - 808548 + | putative regulator SBO_0801 809594 - 808545 - | putative nucleotide di-P-sugar epimerase or dehydratase TERM 988 808681 - 808709 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGGCGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 811087 - 809657 - | putative dTDP-glucose enzyme TERM 989 809867 - 809878 + g 72 -4.4 -4.66833 | opp_overlap 809867 TTTCATGCCAAATAA CAAC GTAA GTTG TTTTTCCGGTTCAAC TERM 990 810174 - 810187 + g 73 -3.8 -4.81734 | TCGTAGCCCCAGTCG CTGG AGTTGA CCAG TTTTTCCTCCTCTTT ybjU 812099 - 811098 - | L-threonine aldolase poxB 813854 - 812136 - | pyruvate dehydrogenase TERM 991 813977 - 813952 - R 82 -11.9 -3.38581 | overlap 813950 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATAAGGCGATTATGC SBO_0805 814955 - 813987 - | HCP oxidoreductase, NADH-dependent TERM 992 814593 - 814581 - G 70 -10.5 -2.71119 | overlap 814563 814580 ACGCATCGACATAAT CGGCG TGA CGCCG CAGCCTGCCGCCAGC ybjW 816619 - 814967 - | hydroxylamine reductase TERM 993 816793 - 816778 - R 72 -3.2 -4.99035 | overlap 816780 TTACGCAGAGAAAAA GGCGAT GAGG ATCGGC ACTAACAGGCTAAGA ybjE 817710 - 816763 - | putative surface protein TERM 994 817998 - 818037 + r 100 -17.8 -2.71364 | TTCGCCAGAGCCCGG GGGGGCAGGGGGCGGC GGCGATTG GCCGCCCCCTGCGCGC TCCTTGCGCCAGTGG TERM 995 818143 - 818125 - R 100 -8.8 -5.46629 | opp_overlap 818125 818124 AACATCTTAAAAAAA GCCTGACA TTA CGCCAGGC CTTCTGCGTTAATTA aqpZ 818851 - 818156 - | aquaporin Z ybjD 819277 - 820935 + | hypothetical protein ybjX 821924 - 820932 - | putative enzyme TERM 996 820957 - 821006 + g 90 -6.6 -5.14965 | gap 3, overlap 820959 820960 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT TERM 997 820960 - 821004 + g 73 -11.6 -2.80472 | gap 2, overlap 820959 820957 ATCGTGGCCATTTGT GGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC CGTTTTTTACTGGCG TERM 998 821765 - 821754 - G 71 -3 -4.7373 | CGAGCGCAGCAAAAA TTTC TGGC GAAA ACTACGGCGATGCCA SBO_0811 822039 - 823154 + | macrolide transporter subunit MacA TERM 999 823379 - 823417 + G 72 -4.6 -4.65263 | gap 3, overlap 823384 GTTGCCACACTGGAC GCCG--ATGCGC-TGGCGC AACT GCGCCGCGAGCATTTCGGC TTTATTTTCCAGCGT TERM 1000 824186 - 824174 - g 75 -5.5 -4.66163 | overlap 824177 ATCGCCATCCAAAAA CAACC GTG GGTCG CCTCAGCCACACCTG TERM 1001 824418 - 824450 + G 85 -13.5 -3.25823 | ATGTGGTTGGCGAGG TGATTCTGGTCGGCA ATA TGCCCGCCAGAGTCA TTGGTGTGGCGGAAG ybjZ 823151 - 825097 + | macrolide transporter ATP-binding /permease protein TERM 1002 825113 - 825133 + T 95 -12.6 -4.35926 | opp_overlap 825113 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT TERM 1003 825133 - 825113 - T 100 -12.6 -4.96848 | opp_overlap 825113 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT cspD 825394 - 825170 - | stationary phase/starvation inducible regulatory protein CspD TERM 1004 825829 - 825839 + G 77 -6.8 -4.45738 | opp_overlap 825829 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG clpS 825717 - 826037 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1005 826045 - 826032 - f 88 -8.1 -4.85599 | TGTACGCTAGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1006 826740 - 826729 - g 70 -7.2 -4.07568 | CTGGTGTCGGTAAAA CCGC GATT GCGG AAGGTCTTGCCTGGC TERM 1007 828250 - 828210 - g 90 -6.8 -5.11033 | opp_overlap 828212 GACAACCTGAAAAAA CCGCTCGCCAACGAAC TGCTGTTTG GTTCGCTGGTGGACGG CGGTCAGGTCACCGT clpA 826068 - 828344 + | ATP-dependent Clp protease ATP-binding subunit TERM 1008 828370 - 828397 + T 100 -15 -5.38054 | AGGTAGGTTGGTCAA GTCCGTAATCTC GAAA GAGGTTACGGAC TTTTTGTTTATGGGG TERM 1009 828674 - 828655 - T 100 -10 -5.82388 | opp_overlap 828655 828653 AAATGCGAAAAAAAA GCTCGCAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1010 828986 - 828970 - T 100 -10.1 -5.56263 | opp_overlap 828970 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT TERM 1011 828970 - 828986 + T 79 -7.9 -4.40037 | opp_overlap 828970 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT infA 829247 - 829029 - | translation initiation factor IF-1 aat 830236 - 829532 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1012 830113 - 830101 - G 81 -6.3 -4.7329 | overlap 830104 AAAACCACGGAAAAA TACCA CGC TGGTA AGCCATTAACAGGCG cydC 831999 - 830278 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 833766 - 832000 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1013 833042 - 833029 - G 74 -3.1 -4.91109 | GCCGGAGGATAAAAA TGCCA GCCG TAGCA CTTCCATTGTCCGTT TERM 1014 833863 - 833829 - R 74 -3.4 -5.06103 | opp_overlap 833830 833833, overlap 833833 833834 ACAACGGGGAAAAAA TAAAGGCGACCCATAG TCG CAAGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1015 833833 - 833859 + r 72 -6.4 -4.25231 | opp_overlap 833829 833833 833834, overlap 833830 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT TERM 1016 833859 - 833833 - R 83 -6.4 -5.04249 | opp_overlap 833833 833830, overlap 833829 833834 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT trxB 834854 - 833889 - | thioredoxin reductase TERM 1017 834717 - 834734 + g 81 -6.9 -4.66163 | overlap 834704 TTCCACTTCTGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT lrp 835399 - 835893 + | leucine-responsive transcriptional regulator TERM 1018 835947 - 835983 + F 79 -8.8 -4.13767 | gap 1, opp_overlap 835949 835953, overlap 835950 835953 TCCTGTTAATCCATA CAG-CAACAGTACTGGG GTAA CCTGGTACTGTTGTCCG TTTTAGCATCGGGCA TERM 1019 835950 - 835979 + F 83 -13.7 -2.75577 | opp_overlap 835949 835953, overlap 835947 835953 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG TERM 1020 835953 - 835976 + F 75 -9.6 -3.52113 | opp_overlap 835949 835953, overlap 835950 835947 TAATCCATACAGCAA CAGTACTGGG GTAA CCTGGTACTG TTGTCCGTTTTAGCA TERM 1021 837814 - 837777 - g 74 -3.2 -5.00616 | opp_overlap 837783 837788, overlap 837735 837778 837779 837781 TCTGGCGTGAAAAAA GCGACACTGGCGACGG GGGCTG CCGCAACCGTTGCCGC GCCAGTCTTCAGTCT ftsK 836028 - 840056 + | DNA translocase FtsK TERM 1022 840111 - 840127 + F 77 -3.8 -5.14965 | opp_overlap 840109, overlap 840109 GGCACTCTATCAACT GAAAAT TCAGT ATTTTC TTTTTTCCTCAAGCT lolA 840208 - 840822 + | outer-membrane lipoprotein carrier protein ycaJ 840833 - 842176 + | recombination factor protein RarA serS 842267 - 843559 + | seryl-tRNA synthetase TERM 1023 843585 - 843598 + F 100 -9.5 -5.72616 | opp_overlap 843585 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT TERM 1024 843598 - 843585 - f 100 -9.5 -4.74103 | opp_overlap 843585 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT dmsA 844125 - 846242 + | anaerobic dimethyl sulfoxide reductase subunit A SBO_0829 846698 - 846973 + | IS629 ORF1 TERM 1025 847292 - 847280 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_0830 847212 - 847859 + | IS629 ORF2 insB 847904 - 848113 + | IS1 ORF2 TERM 1026 848291 - 848255 - T 86 -10.9 -3.72982 | opp_overlap 848262, overlap 848251 848258 848262 ACAGAAAAGAATCAA TGAGCAATGAGGGTTGC CAG GCAACCCTCATTGAATA AAACAGGAATTACTT TERM 1027 848288 - 848258 - T 100 -17 -2.93765 | opp_overlap 848262, overlap 848255 848251 848262 GAAAAGAATCAATGA GCAATGAGGGTTGC CAG GCAACCCTCATTGA ATAAAACAGGAATTA TERM 1028 848262 - 848284 + T 100 -16.4 -3.05384 | opp_overlap 848262 848258 848255 848251 AGAATCAATGAGCAA TGAGGGTTGC CAG GCAACCCTCA TTGAATAAAACAGGA TERM 1029 848284 - 848262 - T 100 -16.4 -3.30956 | opp_overlap 848262, overlap 848258 848255 848251 AGAATCAATGAGCAA TGAGGGTTGC CAG GCAACCCTCA TTGAATAAAACAGGA yeeX 848696 - 848301 - | hypothetical protein TERM 1030 848609 - 848592 - G 70 -5.6 -4.329 | GAACAGACGAACAAA TTCCAG TACGTC CTGGAA TGAAGGCTTGGTAGT yeeA 849395 - 848802 - | hypothetical protein SBO_0834 850310 - 849471 - | IS911 ORF2 TERM 1031 849879 - 849890 + g 77 -5.8 -4.63218 | opp_overlap 849875 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 1032 850231 - 850251 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG sbcB 850972 - 852396 + | exonuclease I yeeD 852666 - 852439 - | hypothetical protein SBO_0837 854048 - 853143 - | insertion element IS2 transposase InsD SBO_0838 854371 - 854006 - | insertion sequence 2 OrfA protein TERM 1033 855232 - 855205 - R 100 -12.8 -6.04419 | opp_overlap 855201 855205 AAAAGAATAAAAAAA CCGGAGCCAAAT ATTC ATTCGACTCCGG TTGATTATTAGAAAA yeeF 856617 - 855253 - | putative amino acid/amine transport protein TERM 1034 856792 - 856766 - R 87 -7.3 -5.26875 | opp_overlap 856769, overlap 856769 GTTTGAAGCAAAAAA TAACCGACGCT GATGA AACGTCGGTTT TTAGTCATTTTTTGA TERM 1035 856789 - 856769 - R 89 -9 -4.72473 | opp_overlap 856769, overlap 856766 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT TERM 1036 856769 - 856789 + r 82 -6.8 -4.88129 | opp_overlap 856769 856766 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT yeeY 857807 - 856878 - | putative transcriptional regulator LYSR-type SBO_0842 858677 - 857853 - | putative enzyme of sugar metabolism yefM 859262 - 859011 - | antitoxin YefM hisL 859545 - 859595 + | his operon leader peptide TERM 1037 859686 - 859660 - f 100 -20.2 -3.99405 | opp_overlap 859660 TGAACGCATGAGAAA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG TERM 1038 859660 - 859686 + F 100 -19.5 -5.4505 | opp_overlap 859660 TGAACGCATGAGAAA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG hisG 859741 - 860640 + | ATP phosphoribosyltransferase hisD 860646 - 861950 + | histidinol dehydrogenase TERM 1039 862806 - 862820 + G 72 -7.1 -4.16943 | opp_overlap 862803 862804 862801 CACTGAAAGAGATCC CCTGC GTGGA GCAGG TTTTCGACTCTGAAA hisC 861947 - 863017 + | histidinol-phosphate aminotransferase TERM 1040 863390 - 863344 - g 82 -7.9 -4.564 | opp_overlap 863344 AAGCCGAAAGTAAAA CTGGTGGAGCGTTATCTCGCT GAGCA AGCGATAGATCGCGCCAACAG TTATGTGATTGGCGA hisB 863017 - 864084 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 864084 - 864674 + | imidazole glycerol phosphate synthase subunit HisH hisA 864674 - 865411 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 865393 - 866169 + | imidazole glycerol phosphate synthase subunit HisF hisI 866163 - 866774 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 1041 866819 - 866854 + T 72 -9 -3.53012 | opp_overlap 866824 866825, overlap 866824 866825 GTAGCATCCGGAAAA AAAAACGGGCAAGGTG TCAC CACCCTGCCCCTTTTC TTTAAAACCGAAAAG TERM 1042 866849 - 866824 - T 100 -11.1 -6.07627 | opp_overlap 866819 866824 866825, overlap 866825 ATCCGGAAAAAAAAA CGGGCAAGGTG TCAC CACCCTGCCCC TTTTCTTTAAAACCG TERM 1043 866824 - 866849 + T 93 -8.9 -4.86731 | opp_overlap 866824 866825, overlap 866819 866825 ATCCGGAAAAAAAAA CGGGCAAGGTG TCAC CACCCTGCCCC TTTTCTTTAAAACCG TERM 1044 866848 - 866825 - T 100 -14.6 -4.22949 | opp_overlap 866824 866819 866825, overlap 866824 TCCGGAAAAAAAAAC GGGCAAGGTG TCAC CACCCTGCCC CTTTTCTTTAAAACC TERM 1045 866825 - 866848 + T 88 -12.4 -3.51557 | opp_overlap 866825 866824, overlap 866824 866819 TCCGGAAAAAAAAAC GGGCAAGGTG TCAC CACCCTGCCC CTTTTCTTTAAAACC wzzB 867905 - 866871 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 1046 867673 - 867684 + g 81 -5.8 -4.86731 | TGAGTAACGATAGCT GTGG AAGT CCAC TTTTCTTTGGCAACG TERM 1047 867984 - 867964 - R 80 -9.7 -3.83921 | GGGAACATAAGAGAA TCAGGGCGA AAA TCGCCATGA TAACAGGATGTTAGT SBO_0854 869700 - 868813 - | IS629 ORF2 TERM 1048 869380 - 869392 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_0855 869975 - 869700 - | IS629 ORF1 TERM 1049 870293 - 870283 - g 100 -6.8 -5.626 | overlap 870284 TATTCCAGAAAAAAA CCCA CAG TGGG CTGTAGAAACAGGCT SBO_0856 870137 - 870574 + | putative nucleotide sugar epimerase TERM 1050 870625 - 870585 - T 100 -15.8 -4.4009 | gap 1, opp_overlap 870596, overlap 870588 870591 870596 TTTGATTTTACAAAA CCATAAGAAAAGGCCCTAA TTTA TTAGGGCCTTTTCTTA-GA ATGAAACAAAATAAT TERM 1051 870623 - 870588 - T 100 -20.8 -3.18044 | opp_overlap 870596, overlap 870585 870591 870596 GATTTTACAAAACCA TAAGAAAAGGCCCTAA TTTA TTAGGGCCTTTTCTTA GAATGAAACAAAATA TERM 1052 870620 - 870591 - T 100 -18.1 -3.72405 | opp_overlap 870596, overlap 870588 870585 870596 TTTACAAAACCATAA GAAAAGGCCCTAA TTTA TTAGGGCCTTTTC TTAGAATGAAACAAA TERM 1053 870615 - 870596 - T 100 -12.2 -4.88258 | opp_overlap 870596, overlap 870591 870588 870585 AAAACCATAAGAAAA GGCCCTAA TTTA TTAGGGCC TTTTCTTAGAATGAA TERM 1054 870596 - 870615 + T 100 -12.2 -4.65916 | opp_overlap 870591 870588 870585 870596 AAAACCATAAGAAAA GGCCCTAA TTTA TTAGGGCC TTTTCTTAGAATGAA ugd 871806 - 870640 - | UDP-glucose 6-dehydrogenase TERM 1055 871731 - 871741 + g 70 -6.8 -4.09685 | CGATATCCAGTGCAA CCAC TTC GTGG TTTTGCGCAATCAGA TERM 1056 872004 - 872026 + r 82 -11.2 -3.63141 | opp_overlap 872005, overlap 872000 872005 TTTGTATAATAAAAA AGCCCGGAGG GTT TCTCCGGGCC TTGCTTTGATTAATT TERM 1057 872025 - 872005 - R 100 -14 -5.55769 | opp_overlap 872005 872004 872000 TTGTATAATAAAAAA GCCCGGAG GGTTT CTCCGGGC CTTGCTTTGATTAAT TERM 1058 872005 - 872025 + r 87 -14.7 -2.768 | opp_overlap 872005, overlap 872004 872000 TTGTATAATAAAAAA GCCCGGAGG GTT TCTCCGGGC CTTGCTTTGATTAAT gnd 873407 - 872055 - | 6-phosphogluconate dehydrogenase wbdS 874663 - 873587 - | putative glycosyl transferase wzy 875927 - 874635 - | O-antigen polymerase TERM 1059 875035 - 875024 - GR 70 -5.8 -4.29325 | overlap 875017 CATTAATATTCAAAA CCTG AAGC CAGG CATCTATACGAGAGA TERM 1060 875370 - 875354 - GR 77 -5.9 -4.66418 | TAAAATAATAATAAA TTATTGC AAA GCAACAA TAACTAGCTAAGATA wbdG 876941 - 875931 - | putative glycosyl transferase wzx 878255 - 877026 - | O-antigen flippase wbdF 879348 - 878236 - | putative glycosyl transferase TERM 1061 878344 - 878368 + g 71 -2.9 -4.81357 | overlap 878345 GGCTTTAATGCTTTC CGAATTATTTG AGA CAATTAATTCA TTTATTTTCTCATAT wbdE 880187 - 879345 - | putative glycosyl transferase TERM 1062 879432 - 879443 + g 90 -4.4 -5.40474 | opp_overlap 879432 879433 TTTATTAAAAATCAA CTTC GCAA GAAG TTTTTTTGCGACAGT TERM 1063 879653 - 879643 - G 100 -5.4 -5.61596 | AGCCGTAGAAAAAAA GTTG AAT CAAC ACCATAAAAATAAAA TERM 1064 879957 - 879969 + g 70 -4.9 -4.56978 | opp_overlap 879939 ATTATATATATAACT TAATG ATT CATTA TTTATTGTTTGACAA rfbC 880743 - 880174 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1065 880706 - 880692 - G 70 -3.6 -4.59773 | overlap 880693 GCTCATCGCCAAAAA CTTTTG GTT CAAAAA TCAGCACATCAGAAA TERM 1066 880716 - 880727 + g 70 -4.4 -4.45664 | CAAAAATCAGCACAT CAGA AATT TCTG TTTTAATTACGTTCA rfbA 881626 - 880748 - | glucose-1-phosphate thymidylyltransferase TERM 1067 881691 - 881681 - R 73 -4 -4.77216 | AACAAGATGCAAAAA CTAT TAA ATAG CTGTAGTCGTAAATA rfbD 882583 - 881684 - | dTDP-4-dehydrorhamnose reductase rfbB 883668 - 882583 - | dTDP-glucose 4,6 dehydratase TERM 1068 884001 - 883946 - R 93 -10.7 -4.52857 | gap 1, opp_overlap 883976 ATTGTTTATATAAAA CAACGGCAG-GAATATTCGCAACAAA TTACT TTCGCCACGAATCTTCACTGCCGTTA TAATTTTCTTATCAA galF 884934 - 884041 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalF wcaM 886503 - 885109 - | putative colanic acid biosynthesis protein TERM 1069 885228 - 885243 + g 79 -4 -5.03314 | CATGAACATTTGCAA GAGACA GCAG TGTTTC TTTTTTCGCCATAAA TERM 1070 886465 - 886447 - G 70 -10.3 -3.18383 | AGGGGTATGGAGGAA GGCAAGC GCCGA GCTTGCC GTCAGGAAGGTGCGT wcaL 887734 - 886514 - | putative colanic acid biosynthesis glycosyl transferase TERM 1071 887150 - 887160 + g 74 -2.4 -5.03145 | GGCGATTTTTTCCCT CGGG CAG CCCA TTTTTTGCAGCCTTC TERM 1072 887732 - 887720 - G 71 -3.4 -4.75404 | opp_overlap 887720 AAATTTCAGTAAAAA GAAG CCGAC CTTC ATTTCACCTCCCCGA wcaK 889011 - 887731 - | putative pyruvyl transferase TERM 1073 888274 - 888305 + g 75 -4.4 -4.73682 | gap 1 GAGACGTTTGTCGAA CGGTGCCAGTT-CGC GCA GGGTAATTGCCACCG TTTTCTGTTGTGCGG TERM 1074 889167 - 889126 - R 90 -12.9 -3.54951 | opp_overlap 889131 889141 889142, overlap 889141 889142 GACCCGAGCACAGAA CCGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATTCAG TGCCTGATGCGACGC TERM 1075 889131 - 889162 + r 70 -10 -3.08464 | opp_overlap 889126 889141 889142, overlap 889141 889142 GAGCACAGAACCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTCAGTGCCTGATGC TERM 1076 889189 - 889141 - R 82 -11.6 -3.30124 | opp_overlap 889131 889141 889142, overlap 889126 889142 CCGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGCG TCTTATCAGGCCTAC TERM 1077 889141 - 889191 + r 77 -10.5 -3.30124 | gap 2, opp_overlap 889126 889141 889142, overlap 889131 889142 CCGTAGGCCGGATAA GGCGT-TCA-CGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGCGTC TTATCAGGCCTACAA TERM 1078 889142 - 889188 + r 83 -13.6 -2.5294 | opp_overlap 889126 889141 889142, overlap 889131 889141 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 1079 889188 - 889142 - R 90 -15.1 -2.57931 | opp_overlap 889131 889142 889141, overlap 889126 889141 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 1080 889263 - 889222 - R 90 -12.9 -3.59946 | opp_overlap 889227 889237 889238, overlap 889237 889238 GTCCCAAGCACAGAA CCGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATTCAG TGCCTGATGCGACGC TERM 1081 889227 - 889258 + r 70 -10 -3.08464 | opp_overlap 889222 889237 889238, overlap 889237 889238 AAGCACAGAACCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTCAGTGCCTGATGC TERM 1082 889285 - 889237 - R 82 -11.6 -3.30124 | opp_overlap 889227 889237 889238 889284, overlap 889222 889238 CCGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGCG TCTTATCAGGCCTAC TERM 1083 889237 - 889287 + r 77 -10.5 -3.30124 | gap 2, opp_overlap 889222 889237 889238, overlap 889227 889238 889284 CCGTAGGCCGGATAA GGCGT-TCA-CGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGCGTC TTATCAGGCCTACAG TERM 1084 889284 - 889238 - R 90 -15.1 -2.57931 | opp_overlap 889227 889237 889238, overlap 889222 889237 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 1085 889238 - 889284 + r 83 -13.6 -2.5294 | opp_overlap 889222 889238 889237, overlap 889227 889237 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 1086 889284 - 889336 + r 71 -7 -4.13767 | gap 1, opp_overlap 889237 889333 889334, overlap 889237 GATGCGACGCTGACG CGTCTTATCAGGCCTACAGGTCCCG AGCA CAGAACC-GTAGGATGGATAAGGCG TTTTACGCTGCACCC wzxC 890861 - 889383 - | colanic acid exporter wcaJ 892257 - 890863 - | putative UDP-glucose lipid carrier transferase cpsG 893682 - 892312 - | phosphomannomutase TERM 1087 893708 - 893730 + r 81 -3.4 -5.3658 | overlap 893715 TTTTTCAGGCAATAG TTGGCCCT GACCGAA ACGGCCAA TTTTGTTTTTGTCGT TERM 1088 893881 - 893833 - R 77 -10.2 -3.30124 | opp_overlap 893841 CCGTAGGTCGGATAA GGCGTTCACGCCGCATCCGACA AACAG CGCCTGATGCGACGTTTACACC CGTCCGTAGCGATCC cpsB 895311 - 893875 - | mannose-1-phosphate guanyltransferase wcaH 897016 - 896534 - | GDP-mannose mannosyl hydrolase wcaG 897981 - 897016 - | putative nucleotide di-P-sugar epimerase gmd 899105 - 897984 - | GDP-D-mannose dehydratase wcaF 899679 - 899131 - | putative colanic acid biosynthesis acetyltransferase WcaF wcaE 900441 - 899695 - | glycosyl transferase wcaD 901669 - 900452 - | putative colanic acid biosynthesis protein TERM 1089 901584 - 901599 + gr 70 -6.1 -4.19238 | GTGATGGGGAAACTT TCGCC AAGCTG GGCGA TTTTGACGTTAACCA wcaC 902861 - 901644 - | glycosyl transferase wcaB 903346 - 902858 - | putative colanic acid biosynthesis acetyltransferase WcaB wcaA 904188 - 903349 - | glycosyl transferase TERM 1090 904241 - 904293 + r 80 -9.8 -3.90588 | gap 1, overlap 904244 TTATAAGCTTGTTTA CGGGTTCTGT-TGCCGGATGCGGCG TGAG CGCCTTATCCGGCCTACGGAGCTGG TTTGCTTGCCGGATG TERM 1091 904244 - 904290 + r 80 -12.3 -3.02166 | gap 1, overlap 904241 TAAGCTTGTTTACGG GTTCTGT-TGCCGGATGCGGCG TGAG CGCCTTATCCGGCCTACGGAGC TGGTTTGCTTGCCGG TERM 1092 904355 - 904322 - R 70 -10.3 -2.52464 | opp_overlap 904349, overlap 904332 904334 TGCGGCGTCAACGTA GGTCGGATAAGATGC GTCA GCATCGCATCCGACA ACGGATCTCGTTATT TERM 1093 905036 - 905048 + r 70 -9.1 -3.34646 | overlap 905032 GTTGGATTCCCCACC GCCAG TAG CTGGC TCTGTTTATAGCGTT wzb 906974 - 906531 - | tyrosine phosphatase TERM 1094 906692 - 906723 + g 70 -5.8 -4.21194 | TGCCGCGCATCTCAG GTGCCATCTCGCAT AAGC GTTCGATATGGCGC TTTTCCATGGTCAAA wza 908119 - 906980 - | putative polysaccharide export protein TERM 1095 909552 - 909508 - g 95 -15.7 -2.90075 | opp_overlap 909517 TTTCCGCTAACCAGA CGCTACGCCAGCGGACTACCG AAG CGGTAATGCGCCTGCTTAGCG GGCAAAAAGAAGATG TERM 1096 910194 - 910182 - g 70 -4.1 -4.72272 | overlap 910183 CCGCTGGATGAAAAA CGTGA ATA TCACA CCATTGCCGGGCTGT yegH 908712 - 910361 + | putative transport protein asmA 912488 - 910635 - | putative assembly protein TERM 1097 911267 - 911286 + g 74 -8.6 -3.8709 | overlap 911268 911274 TGCCAATCTCAACGT TTTCCAGC CGTG GCTGGAAG TTTATCCGCGGATTT TERM 1098 911622 - 911651 + g 70 -7.1 -4.128 | GTCAAGATTCAGTTG CGGGAATTGCAGT CTCA GCTGCCATTCCGG TTTCTCTGTCAGCGT dcd 913091 - 912510 - | deoxycytidine triphosphate deaminase udk 913824 - 913183 - | uridine kinase TERM 1099 913224 - 913234 + g 70 -4.6 -4.56597 | opp_overlap 913220 913218 CTTTCAATATATCGA TCGC GAT GCGG TTTTTCCCGCCGCGC TERM 1100 914290 - 914309 + r 70 -5 -4.38712 | gap 1, overlap 914293 CACTGTGGTTCCCGA CGTCCATCA TGA TGGTGG-CG TTTTATCGCCATGCC TERM 1101 914581 - 914606 + r 73 -4.6 -4.81551 | overlap 914582 TGGTTGTCCTGCTGA CGCCCGGAGA CGATCC TCTCAGGGCA TTTTTGATATGGGTA TERM 1102 915062 - 915027 - R 93 -12 -3.75153 | gap 1, overlap 915031 915032 915046 915047 CGTGCGGAACGCAAA CACATTTCCGAAAGCGA AAC CCGCTTTCGGAA-CGCG ATGGAATATTCCGCT TERM 1103 915059 - 915031 - R 85 -12.5 -3.30106 | overlap 915027 915032 915046 915047 CGGAACGCAAACACA TTTCCGAAAGCGA AAC CCGCTTTCGGAAC GCGATGGAATATTCC TERM 1104 915058 - 915032 - R 90 -16 -2.57581 | overlap 915031 915027 915046 915047 GGAACGCAAACACAT TTCCGAAAGCGA AAC CCGCTTTCGGAA CGCGATGGAATATTC TERM 1105 915297 - 915276 - R 76 -5.1 -4.75174 | opp_overlap 915276 TATTCAATGGAAAAA CGCTACTAC AACC GTAATGGCG ATGTTGTCTGGGCGT alkA 918335 - 917478 - | 3-methyl-adenine DNA glycosylase II TERM 1106 918573 - 918555 - g 72 -5.2 -4.4874 | opp_overlap 918556, overlap 918556 GCTAAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG TERM 1107 919310 - 919297 - g 73 -3.8 -4.81249 | GGCGAAACCGAAAAA GGCA TCGCCC TGCC GATCCTGCCGTGGTG yegD 918469 - 919821 + | putative chaperone TERM 1108 919867 - 919829 - T 83 -6.7 -5.07652 | gap 1, opp_overlap 919828 919829 TTCGTTAAAAGAAAA TGGCTCAGCAGC-GGC TTAAATCT GCCTGCGCCTGAGCCA GTTTTTCTGCCGCCT SBO_0897 921755 - 919833 - | putative chaperonin SBO_0898 922513 - 921752 - | hypothetical protein TERM 1109 922018 - 922002 - G 71 -9.5 -3.53444 | CCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC GGCATCTTCGTCGGT TERM 1110 922525 - 922498 - G 74 -8.4 -3.92373 | overlap 922501 CAGCGGATGCATAAA CCAGACGCCAGC TCAC ACTGACGTCCAG CCTTTTGGCGCTTCC SBO_0899 923169 - 922510 - | hypothetical protein TERM 1111 922981 - 922991 + g 72 -5.4 -4.56597 | GAACGTCACAATGCC GAGT TCC ACTC TTTTTAAAGCCAGCG TERM 1112 923798 - 923817 + H 86 -11.4 -3.71649 | opp_overlap 923797, overlap 923808 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 1113 924126 - 924145 + H 86 -11.4 -3.71649 | overlap 924136 924138 924144 CTTTCCTTATTTATG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 1114 925057 - 925035 - g 71 -10.6 -2.93853 | opp_overlap 925035 925036, overlap 925034 TGTTGGTAACCAAAT CTCCAGTGGT GAT ACCACCGGAA TTGTGGTGATCACCC SBO_0900 924385 - 925632 + | multidrug efflux system subunit MdtA TERM 1115 925629 - 925618 - f 80 -5.8 -5.09173 | opp_overlap 925628 GAATACGCGAAAAAA GGAG CACG CTCC TGATGCAGGTGTTAC TERM 1116 925657 - 925676 + G 72 -6.4 -4.33819 | opp_overlap 925659 TACCCCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 1117 926938 - 926916 - g 73 -4.1 -4.7657 | gap 1 GAAAAAGGCGAAAAA CCGTTG-GCG GCGG CGCTCAAGGG CGCAGGTGAAATCGG yegN 925632 - 928754 + | multidrug efflux system subunit MdtB TERM 1118 929244 - 929266 + G 74 -10.6 -3.18849 | overlap 929229 929242 TCGACGCAGCTGGCT CCGACGATTT CGC AAATCGACGG TGTTGGTGATGTCGA TERM 1119 929486 - 929464 - g 75 -5.4 -4.68994 | opp_overlap 929466 929477, overlap 929466 929477 929480 ATGATGAGCTAAAAA CCGCCGCCGA ATA TCAGCCGCTG ATTATTCATTACAAC TERM 1120 931530 - 931514 - g 77 -3 -5.07486 | gap 1, opp_overlap 931514 931516, overlap 931516 CATCGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG yegO 928755 - 931832 + | multidrug efflux system subunit MdtC yegB 931833 - 933248 + | multidrug efflux system protein MdtE TERM 1121 933568 - 933524 - g 78 -8.4 -4.20025 | gap 1, opp_overlap 933530, overlap 933520 AATTCGGAAGATAAA CCCGGCCCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAGTTCTGG GTGGTCGATCAAAAC TERM 1122 933530 - 933562 + G 80 -12 -3.37975 | gap 1, opp_overlap 933520 933524 GAAGATAAACCCGGC CCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAG TTCTGGGTGGTCGAT baeS 933245 - 934648 + | signal transduction histidine-protein kinase BaeS TERM 1123 935079 - 935090 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCATG TERM 1124 935277 - 935265 - g 78 -5.5 -4.81551 | overlap 935266 CAGCCACATTAAAAA CCTGC GCC GCAAG CTGGAATCTCTCGAC baeR 934645 - 935367 + | DNA-binding transcriptional regulator BaeR SBO_0906 935519 - 935890 + | hypothetical protein TERM 1125 935898 - 935924 + F 80 -6.5 -4.84146 | ATACGTAATTACGAT GCCGGGCGT GGGTTGTTG GCGTCCGGC TTTATTTTCTCTCAT SBO_0907 936067 - 937413 + | hypothetical protein TERM 1126 938480 - 938466 - g 73 -9.2 -3.69395 | overlap 938463 TTTATGATCGAAGAA GCCCAG CGT CCGGGC GAGTATATGACCGCG yegQ 937734 - 939095 + | hypothetical protein TERM 1127 939229 - 939260 + T 100 -8.1 -5.28176 | overlap 939232 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTATGCATAAG TERM 1128 939232 - 939257 + T 93 -9.8 -4.73105 | overlap 939229 GGAACCACCTCCTTA GCCTGTGTAA TCTCCC TTACACGGGC TTATTTTTTATGCAT SBO_0909 939757 - 939425 - | hypothetical protein TERM 1129 941123 - 941092 - R 72 -8.7 -3.69621 | opp_overlap 941102, overlap 941085 AGGGAGAATCCGAAA TGCCGGATGCGGT GTAAAT ACCTTATCCGGCA TACAGAACAATACTA gatR 941915 - 941136 - | galactitol utilization operon repressor TERM 1130 941758 - 941771 + g 74 -2.3 -5.06414 | opp_overlap 941757, overlap 941759 GCACCGCCATGAAAG CGCGT AACC ACGCC TTTTTGTTCGAGAAA TERM 1131 941985 - 942012 + r 76 -9.1 -3.74693 | gap 1, opp_overlap 941984 941986 941987, overlap 941986 TCTGTTTTGCACAAT AC-CGGGCCAGC ATCAC GCTGGCCCGCGG TTTCATGGAATGAGC TERM 1132 941986 - 942011 + r 79 -12.6 -2.84602 | gap 1, opp_overlap 941984 941986 941987, overlap 941985 CTGTTTTGCACAATA C-CGGGCCAGC ATCAC GCTGGCCCGCG GTTTCATGGAATGAG TERM 1133 942010 - 941986 - R 83 -13.5 -3.21276 | opp_overlap 941986 941985, overlap 941984 941987 CTGTTTTGCACAATA CCGGGCCAGCA TCA CGCTGGCCCGC GGTTTCATGGAATGA TERM 1134 942009 - 941987 - R 95 -17 -2.52623 | opp_overlap 941986 941985, overlap 941986 941984 TGTTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCATGGAATG gatD 943055 - 942015 - | galactitol-1-phosphate dehydrogenase gatC 944458 - 943103 - | PTS system galactitol-specific enzyme IIC gatB 944746 - 944462 - | galactitol-specific PTS system component IIB gatA 945229 - 944777 - | galactitol-specific PTS system component IIA gatY 947400 - 946546 - | tagatose-bisphosphate aldolase TERM 1135 946851 - 946832 - G 71 -3.4 -4.85599 | overlap 946836 946837 TCCAGTCTAGAAAAA TCAAGCGC CGGT GCGCTGGC ATACATCCCATGAGC TERM 1136 947545 - 947524 - R 100 -13.7 -5.58209 | TGAAAGGCAAAAAAA CGGCCTCCC GATA GGGAAGCCG TAGCAAAGTGCGCGT SBO_0918 948760 - 947708 - | fructose-bisphosphate aldolase TERM 1137 948861 - 948873 + H 76 -4.1 -5.08011 | overlap 948859 ACGGGCGAGTTTTTC CATCT TTT GGATG TTTTTTCAGCGTTTT TERM 1138 949040 - 949024 - g 85 -8.7 -4.56729 | opp_overlap 949024 949027 ATTAAAAGATGAAAA CAACAGC AAA GCTGTCG TTCATGATGTTTGTT TERM 1139 950034 - 950001 - g 79 -2.3 -5.252 | overlap 950003 TATGTCGATAAAAAA GCCCCCGTGCA TATGCGTACCGC CGCGCAGGGGC TGATCACGCTCTGCT TERM 1140 950170 - 950199 + G 80 -11.5 -3.27622 | overlap 950168 GGATGTGGACTTTTG GCGCGGTGATGAT TGCC ATTATCGCCGTGC TGTTCATGATTTTTT yegT 949017 - 950294 + | putative nucleoside permease protein TERM 1141 950943 - 950909 - g 72 -4.3 -4.72986 | gap 2 CATGCCCAGCAAAAA CGCACCACCACGTTCAG CGC CTCA-C-TGGCGGCGCG GCTGGAGATTGCGCT SBO_0920 950291 - 951295 + | hypothetical protein TERM 1142 951359 - 951389 + G 80 -11.9 -3.33162 | gap 1, overlap 951353 CGGTGATGGTCGTCG GCG-CGGCGGTCAT TGAC GTGATCGCCGACGC TTATGCCCTCCCCTG SBO_0921 951292 - 952257 + | putative kinase yegW 952977 - 952231 - | putative transcriptional regulator TERM 1143 952292 - 952340 + g 93 -11 -4.39568 | opp_overlap 952292, overlap 952294 ATGCTGTACTCAATA GGCCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGGTA TTTTGCTATCTAACT TERM 1144 952294 - 952338 + g 100 -15.8 -3.79993 | opp_overlap 952292, overlap 952292 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA TERM 1145 952845 - 952876 + g 83 -5.1 -5.12707 | gap 1, opp_overlap 952844 952845 CACCGGGCAAAATAT TGCCATGCTCCAGC ACCCC GCTGC-GCACGGCA TTTTTTACCGTTTCG TERM 1146 952926 - 952908 - G 78 -8.8 -4.25401 | CAAACTTAATATAAA GCGGCG TGTTATC CGCCGC TAAAATACGCTCGTT yegX 953856 - 953029 - | hypothetical protein thiD 954712 - 953912 - | phosphomethylpyrimidine kinase TERM 1147 954378 - 954364 - G 73 -9.2 -3.66178 | opp_overlap 954365 954367, overlap 954349 CCGCCGAAGGTGAAA GCAGCG GGT CGCCGC TTTTTGCCAGCATAA TERM 1148 954367 - 954378 + g 77 -7.2 -4.57569 | opp_overlap 954349 954364, overlap 954365 CCGAAGGTGAAAGCA GCGG GTCG CCGC TTTTTGCCAGCATAA thiM 955497 - 954709 - | hydroxyethylthiazole kinase TERM 1149 955793 - 955779 - R 100 -9.2 -5.64274 | opp_overlap 955778 GCAGGCACAAAAAAA CCGCCC ATA AGGCGG CTTAAGTAAATTATT SBO_0926 956752 - 955865 - | IS629 ORF2 TERM 1150 956432 - 956444 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_0927 957027 - 956752 - | IS629 ORF1 TERM 1151 957265 - 957225 - R 80 -6.9 -4.59853 | opp_overlap 957233, overlap 957204 957229 TTAATGCGGCAAAAA CTAATACACCGCATCAATG TAA CATCTCTGCGGTGTATGAA GAATAACCAGAATGG TERM 1152 957261 - 957229 - R 79 -9.9 -3.80855 | opp_overlap 957233, overlap 957204 957225 TGCGGCAAAAACTAA TACACCGCATCAATG TAA CATCTCTGCGGTGTA TGAAGAATAACCAGA mrp 958400 - 957291 - | putative ATPase TERM 1153 958899 - 958882 - g 93 -8.5 -4.86731 | TCGCCTGAAAGAAAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 1154 958944 - 958931 - g 70 -3.8 -4.60487 | opp_overlap 958936 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTGAA TERM 1155 959573 - 959561 - g 76 -9.1 -3.73775 | opp_overlap 959557 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG TERM 1156 960211 - 960188 - g 75 -5.2 -4.63179 | gap 1 AAAGAAGAAGTAAAA GCC-GCTGCCG CGC CGGTAACTGGC CCGCTGGCAGATGAT metG 958532 - 960565 + | methionyl-tRNA synthetase TERM 1157 960577 - 960596 + T 100 -10.7 -5.01553 | ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT SBO_0931 961674 - 960943 - | IS600 ORF2 SBO_0932 962117 - 961815 - | IS600 ORF1 TERM 1158 962305 - 962274 - R 95 -13.1 -3.79251 | opp_overlap 962285 GATCGGATGACGAAA GCCATTGCTGCGT TCCCAC ATGCAGCAATGGC GGCACTGACGGAACT insB 963424 - 962921 - | IS1 ORF2 SBO_0935 963499 - 963630 + | putative IS1 encoded protein SBO_0936 964387 - 963668 - | IS911 ORF2 TERM 1159 963956 - 963967 + g 77 -5.8 -4.63218 | opp_overlap 963952 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 1160 964308 - 964328 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 1161 964960 - 964984 + G 72 -4.9 -4.69656 | overlap 964961 AGTTTGTCATGACGC ACCTGCAACTC GCT GGGTTACAGGG TTTTATTCACTCCTT TERM 1162 966024 - 966010 - g 83 -5.7 -5.04868 | overlap 966021 CCAAACCAAACAAAA GCGAT GATGA ATCGC GGTCGAACGATGCGG TERM 1163 966507 - 966489 - g 70 -5.3 -4.42386 | gap 1, overlap 966491 TGGGCAGGCAGAAAA TG-CCCGA GCGG TCGGGTCA TGGGGCTGGCGAATA molR_D 964776 - 966806 + | putative regulator (fragment) TERM 1164 967453 - 967485 + G 72 -5.5 -4.48987 | opp_overlap 967449 967453 967448 ACCAGAAATAGCCAA TGAGTTGGTAGGCCT TGA ATGCCCGCGAACTCA TTTTCATTCTAAGAA TERM 1165 967844 - 967810 - g 71 -2.1 -5.00846 | gap 1, overlap 967811 TAAATACCATAAAAA CTTCCCCCA-TGCGAC GCTC GCCGCACTGGCAGAAC TGCTGGCGTTAACAG TERM 1166 967916 - 967903 - g 81 -4.5 -5.10767 | CATCGAAGACAAAAA GCTGC CTGC ACAGC AAAAAGCACGCGATG TERM 1167 969273 - 969260 - g 73 -9.5 -3.61517 | ACTGCCTGGCAACAA GCGGG GGCC CCCGC AAAAGACAACTGGGC yehI 967094 - 970447 + | putative regulator TERM 1168 970482 - 970451 - Tf 72 -5.1 -4.7254 | opp_overlap 970456, overlap 970453 970455 970456 ATTTTCCATTAAAAA CACAGCGGGCAGT GATGCA ACTGCCCGTTATC AACACGACTTACCAG TERM 1169 970480 - 970453 - Tf 71 -7.7 -3.98256 | opp_overlap 970456, overlap 970451 970455 970456 TTTCCATTAAAAACA CAGCGGGCAGT GATGCA ACTGCCCGTTA TCAACACGACTTACC TERM 1170 970456 - 970477 + TF 79 -11.6 -3.29043 | opp_overlap 970455 970453 970451 970456 CCATTAAAAACACAG CGGGCAGT GATGCA ACTGCCCG TTATCAACACGACTT TERM 1171 970477 - 970456 - Tf 76 -11.6 -2.74018 | opp_overlap 970456, overlap 970455 970453 970451 CCATTAAAAACACAG CGGGCAGT GATGCA ACTGCCCG TTATCAACACGACTT SBO_0940 971024 - 970815 - | putative IS1 encoded protein yehK 970509 - 970871 + | hypothetical protein insB 971099 - 971602 + | IS1 ORF2 TERM 1172 972026 - 972082 + F 72 -10.5 -2.92439 | opp_overlap 972033 972038 972043 972046, overlap 972033 972038 972046 972081 TGTGGTGTTAGGCCT GAAAGTAGTAAATAAAAGAACCTGC CTCACCA GCAGGTTTTTTTATTTACTGTGATC TGCTTTCCAGATATT TERM 1173 972033 - 972075 + F 93 -16 -2.90725 | opp_overlap 972033 972038 972043 972046, overlap 972026 972038 972046 TTAGGCCTGAAAGTA GTAAATAAAAGAACCTGC CTCACCA GCAGGTTTTTTTATTTAC TGTGATCTGCTTTCC TERM 1174 972075 - 972033 - f 87 -14.5 -2.91144 | opp_overlap 972026 972033 972038 972046, overlap 972038 972043 972046 TTAGGCCTGAAAGTA GTAAATAAAAGAACCTGCC TCACC AGCAGGTTTTTTTATTTAC TGTGATCTGCTTTCC TERM 1175 972070 - 972038 - f 74 -8.6 -3.8901 | opp_overlap 972033 972026 972038 972046, overlap 972033 972043 972046 CCTGAAAGTAGTAAA TAAAAGAACCTGCC TCACC AGCAGGTTTTTTTA TTTACTGTGATCTGC TERM 1176 972038 - 972070 + F 80 -10.1 -3.8766 | opp_overlap 972038 972033 972043 972046, overlap 972033 972026 972046 CCTGAAAGTAGTAAA TAAAAGAACCTGC CTCACCA GCAGGTTTTTTTA TTTACTGTGATCTGC TERM 1177 972065 - 972043 - f 76 -4.1 -4.96388 | opp_overlap 972038 972033 972026 972046, overlap 972038 972033 972046 AAGTAGTAAATAAAA GAACCTGCC TCACC AGCAGGTTT TTTTATTTACTGTGA TERM 1178 972062 - 972046 - f 74 -5.8 -4.56436 | opp_overlap 972038 972033 972026 972046, overlap 972043 972038 972033 TAGTAAATAAAAGAA CCTGCC TCACC AGCAGG TTTTTTTATTTACTG TERM 1179 972046 - 972062 + F 100 -5.1 -5.99154 | opp_overlap 972046 972043 972038 972033, overlap 972038 972033 972026 TAGTAAATAAAAGAA CCTGC CTCACCA GCAGG TTTTTTTATTTACTG yehL 972115 - 973257 + | hypothetical protein TERM 1180 974605 - 974632 + G 88 -12 -3.73072 | opp_overlap 974590 974589 CCGCCCGCTTAGCCA GCATGCGGCATT GATT GAGGCCGCATGC TTTGGTGCAACACTT yehM 973268 - 975547 + | hypothetical protein yehP 975540 - 976676 + | hypothetical protein TERM 1181 976721 - 976740 + G 70 -4.2 -4.63218 | opp_overlap 976707 976704 976703, overlap 976722 ACACCGCAGGCCCTG ACGGCGTT AAGC AATGCCGG TTTTGTTAAGCGCAG TERM 1182 977446 - 977432 - g 77 -11.4 -3.14211 | AGCCGCGCGCAGCAA GCAGCG GAA CGCTGC AGCTGGCGATGGGTG TERM 1183 978533 - 978546 + G 75 -4.5 -4.85599 | opp_overlap 978532, overlap 978532 TTGCTGGCGAATGAC CTCAC CGCG GTGGG TTTTTATCGGCTGGC yehQ 976673 - 978673 + | hypothetical protein TERM 1184 978752 - 978768 + F 91 -10.9 -4.33621 | opp_overlap 978748 TATCCTATATAGCCC CTGGTGA GAG TCACCAG TTTCTTGATTAAATA TERM 1185 978917 - 978891 - g 76 -8 -4.29073 | GAAGAATCGAAGAAA TTCAGCGCCAAT CTG AACGGCACTGAA ATTGCCATTACCTAT yehR 978786 - 979259 + | hypothetical protein yehS 979770 - 979300 - | hypothetical protein yehT 980551 - 979817 - | putative two-component response-regulatory protein YehT yehU 982218 - 980533 - | putative 2-component sensor protein TERM 1186 981181 - 981199 + g 70 -5.8 -4.18488 | overlap 981197 AAGCAGTTGCGCAAT CCCCTCGC CCA GCGTGCGG TTTATTGAACTGAAT TERM 1187 982542 - 982526 - H 78 -5.1 -5.09173 | overlap 982528 CAACATTTTAAAAAA TCGACGA AGA TCGTCCA GGAGCGCCGTTTTTC SBO_0950 982733 - 982981 + | putative DNA damage-inducible protein TERM 1188 983050 - 983082 + T 100 -8.4 -5.63236 | gap 1, opp_overlap 982996 983050 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT SBO_0951 983366 - 983097 - | hypothetical protein SBO_0952 983435 - 984091 + | unknown protein encoded within prophage TERM 1189 984099 - 984131 + F 89 -11.4 -4.08919 | gap 1, opp_overlap 984099 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT TERM 1190 984131 - 984099 - f 86 -13.6 -3.16564 | gap 1, opp_overlap 984099 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT ipaH_2 984407 - 986050 + | invasion plasmid antigen TERM 1191 986115 - 986092 - T 93 -10.2 -4.58395 | opp_overlap 986104 986105, overlap 986094 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 1192 986113 - 986094 - T 100 -15 -3.90762 | opp_overlap 986104 986105, overlap 986092 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT SBO_0954 986793 - 986230 - | putative tail component of prophage SBO_0955 987895 - 986804 - | putative tail fiber protein TERM 1193 988113 - 988095 - R 73 -7.4 -4.13995 | overlap 988098 TCGCGATAAATTAAA TCAGGAAG AAC CTTCCGGA GAGACGGGCCATTCA SBO_0956 988640 - 988095 - | putative tail fiber assembly protein SBO_0957 989116 - 988643 - | hypothetical protein SBO_0958 989850 - 989185 - | putative tail fiber protein SBO_0959 990427 - 989837 - | putative tail protein TERM 1194 990147 - 990157 + g 75 -6.8 -4.4078 | TCATTTATGCCACCA GCCA CAT TGGC TTTTGCTTCAAGACG SBO_0960 990667 - 990969 + | IS600 ORF1 SBO_0961 991110 - 991823 + | IS600 ORF2 SBO_0962 992622 - 991864 - | hypothetical protein TERM 1195 991950 - 991975 + g 70 -9.7 -3.14944 | GGTGGGCGTGAGGCA GCAGCGCAAGA TTTT TTGTGCGCTGC TTCAGTATGCTGGTG TERM 1196 992864 - 992835 - R 79 -11.3 -3.44319 | opp_overlap 992835, overlap 992836 TTGAATGCATGAGAA CGCCGCCCGTGCC TGCT GGCAGGCGCGGCA GAGTTATCCGAATTG TERM 1197 992863 - 992836 - R 78 -12.6 -2.6627 | opp_overlap 992835, overlap 992835 TGAATGCATGAGAAC GCCGCCCGTGCC TGCT GGCAGGCGCGGC AGAGTTATCCGAATT TERM 1198 992999 - 992986 - R 100 -9.5 -5.49579 | opp_overlap 992986 CCAGAAAAAACAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 1199 992986 - 992999 + r 70 -9.5 -3.06183 | opp_overlap 992986 CCAGAAAAAACAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG relF 993225 - 993070 - | RelF TERM 1200 993196 - 993211 + g 86 -9 -4.36411 | opp_overlap 993195 993196 ACAGATGACGATAAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 1201 993290 - 993340 + r 93 -9.9 -4.64844 | gap 1 TTCAGCATGGATTGA GCCTCAGATTAATGTTAAGCGTCT TGCA GGACGCGTAGTGTTAA-CTGGGGC TTTTCTCTATCTGCC SBO_0964 993703 - 993485 - | hypothetical protein TERM 1202 993550 - 993535 - G 85 -3.2 -5.42862 | overlap 993523 ACACCCCTAAAAAAA GGGCAT TTAT ATGTCC AAACATTAATATCAA SBO_0965 994293 - 993877 - | hypothetical protein SBO_0966 994475 - 994299 - | putative IS1 encoded protein insB 994568 - 995071 + | IS1 ORF2 SBO_0968 995622 - 995167 - | putative phage-related protein SBO_0969 995884 - 995609 - | hypothetical protein SBO_0970 996333 - 995911 - | putative bacteriophage protein SBO_0971 997444 - 996374 - | hypothetical protein TERM 1203 996926 - 996965 + g 70 -4.3 -4.49937 | gap 1, overlap 996928 996930 GGTCTGAACATCCCC TGC-CTGGTTCGTGGCGT TTTTT ACGCCATGGACCATAGTG TTTTGATCTTCTTGA TERM 1204 996930 - 996960 + g 86 -14.1 -2.97995 | overlap 996928 996926 TGAACATCCCCTGCC TGGTTCGTGGCGT TTTTT ACGCCATGGACCA TAGTGTTTTGATCTT SBO_0972 997941 - 997516 - | hypothetical protein TERM 1205 998625 - 998615 - g 75 -5.4 -4.62872 | ATGAACTTTTAAAAA CTCT TGA AGAG AAAAAACAGAAGTAC SBO_0973 998272 - 998691 + | putative transcriptional regulator insB 999526 - 999023 - | IS1 ORF2 SBO_0975 999601 - 999819 + | putative IS1 encoded protein TERM 1206 1000477 - 1000459 - g 77 -3 -5.04249 | overlap 1000461 TCCTGAAAAAAGAAA GTCCGTTC AAA GAATGGTC CGCAGCACTTCGTGC TERM 1207 1000877 - 1000866 - g 70 -4.4 -4.4959 | GCTAACCAAGTAAAA GTCA CCGC TGAC GAAGTAAACAAAATT TERM 1208 1001180 - 1001148 - g 70 -4 -4.67904 | gap 1, overlap 1001149 CAGGAACCGGAAAAA GTCTGCACCGC-CTG CGGT CAGAGCGGTGGCGGC AACTACCCTGATTGT TERM 1209 1001364 - 1001350 - g 70 -5.6 -4.3586 | opp_overlap 1001349 CCAGCGATAGTAAAA CTGGCG AGA CGGCAG ATCCCTTAATTACGG TERM 1210 1001784 - 1001767 - g 76 -12.7 -2.55351 | opp_overlap 1001762, overlap 1001766 GCCGTTCATACGAAC GGCAGGG GATC CCCTGCC CGTGGCGTTACTACA SBO_0976 999816 - 1001972 + | putative exodeoxyribonuclease VIII SBO_0977 1002615 - 1003259 + | putative integrase for prophage SBO_0979 1003431 - 1004267 + | hypothetical protein TERM 1211 1004533 - 1004559 + F 100 -15.9 -4.34402 | overlap 1004548 TTTTAACATCTTAAG CGCCCTCGACC TTTAT GGTTGAGGGCG TTTTGCTATGAACGC SBO_0982 1006188 - 1006463 + | IS629 ORF1 TERM 1212 1006783 - 1006771 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_0983 1006463 - 1007350 + | IS629 ORF2 dmsC 1007675 - 1008538 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1213 1008543 - 1008570 + T 83 -6.2 -5.04733 | opp_overlap 1008548, overlap 1008548 TCGCAAGCTAATCAT AACAACCGGGGT TTCG GCCCCGGTTCTC TTTTATTTCTGCTTC TERM 1214 1008548 - 1008565 + T 87 -10.5 -4.14927 | opp_overlap 1008548, overlap 1008543 AGCTAATCATAACAA CCGGGGT TTCG GCCCCGG TTCTCTTTTATTTCT TERM 1215 1008565 - 1008548 - T 80 -9.8 -3.89572 | opp_overlap 1008543 1008548 AGCTAATCATAACAA CCGGGG TTTCGG CCCCGG TTCTCTTTTATTTCT ycaC 1009154 - 1008573 - | hypothetical protein SBO_0987 1010249 - 1009410 - | IS911 ORF2 TERM 1216 1009818 - 1009829 + g 77 -5.8 -4.63218 | opp_overlap 1009814 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG SBO_0988 1010840 - 1010559 - | hypothetical protein SBO_0989 1010828 - 1011733 + | insertion element IS2 transposase InsD ycaD 1012099 - 1013247 + | MFS family transporter TERM 1217 1013258 - 1013289 + T 100 -13.2 -5.82036 | opp_overlap 1013253 1013258 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1218 1013289 - 1013258 - T 83 -13.2 -3.26596 | opp_overlap 1013258, overlap 1013253 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT SBO_0992 1014482 - 1013577 - | insertion element IS2 transposase InsD SBO_0993 1014805 - 1014440 - | insertion sequence 2 OrfA protein SBO_0995 1016445 - 1015207 - | putative oxidoreductase TERM 1219 1015546 - 1015530 - G 85 -11.5 -3.68827 | CATCGATGATCGAAA CGCCCAG CTC CCGGGCG CTGGTAAACTCTTTT TERM 1220 1016148 - 1016138 - G 85 -6.8 -4.76123 | overlap 1016139 AAATCAGTAACAAAA CGCT GTA AGCG GCCGATATCAATGGG SBO_0996 1017081 - 1016842 - | hypothetical protein TERM 1221 1016951 - 1016968 + g 75 -5.5 -4.60924 | opp_overlap 1016953, overlap 1016953 TTTGCTCGCCAGACA TACACCG GTTC CGGTGCA TTTTTAACCCGTTTA sanA 1017803 - 1017084 - | hypothetical protein TERM 1222 1017212 - 1017202 - G 79 -4.6 -5.00884 | opp_overlap 1017202 AGCGGCCCTAAAAAA CGCG GTT CACG TTTAAAAATATAAAG TERM 1223 1017885 - 1017869 - R 89 -10.9 -4.15044 | GTTTTGCGCAAGAAA CGGCAAA CTG TTTGCCG GGAATTTCGACACCA cdd 1018837 - 1017953 - | cytidine deaminase TERM 1224 1018957 - 1018947 - R 82 -6.8 -4.82154 | overlap 1018949 AACTTACATCAAAAA TGCG CGA CGCA TCGCAAATTTTAGCC yohK 1019662 - 1018967 - | hypothetical protein yohJ 1020057 - 1019659 - | hypothetical protein TERM 1225 1020001 - 1019982 - G 90 -9.3 -4.4959 | GGGAAGCAATGAAAA TGCCTGC ATACAG GCAGGCA TAAATCAGGACGAAA TERM 1226 1020228 - 1020201 - R 73 -10.6 -3.0281 | opp_overlap 1020201, overlap 1020194 1020203 TACATCAAGCATAGA GAGGGATTACAG TTTG CAGCAATCCCTC TTTGCAGACCTTTAA TERM 1227 1020255 - 1020275 + r 80 -9.7 -3.84633 | opp_overlap 1020257, overlap 1020255 1020257 TTAATCCGTTGACCA TAGGCGCTA ACA TAGCGCCTC ATTTTTTTGCGGGTG TERM 1228 1020255 - 1020276 + r 100 -8.1 -5.42259 | gap 1, opp_overlap 1020257, overlap 1020255 1020257 TTAATCCGTTGACCA T-AGGCGCTA ACA TAGCGCCTCA TTTTTTTGCGGGTGA TERM 1229 1020257 - 1020273 + r 88 -12.3 -3.49966 | opp_overlap 1020257, overlap 1020255 1020255 AATCCGTTGACCATA GGCGCTA ACA TAGCGCC TCATTTTTTTGCGGG TERM 1230 1020273 - 1020257 - R 79 -12.3 -2.78715 | opp_overlap 1020257 1020255 1020255 AATCCGTTGACCATA GGCGCTA ACA TAGCGCC TCATTTTTTTGCGGG TERM 1231 1021391 - 1021352 - R 90 -15 -2.71364 | CCACTGGCGCAAGGA GCGCGCAGGGGGAGGA CAATCGCC TCCTCCCCCTGCCCCC CCGGGCTCTGGCGAA insB 1023052 - 1022549 - | IS1 ORF2 SBO_1004 1023127 - 1023309 + | putative IS1 encoded protein SBO_1005 1023968 - 1023759 - | putative IS1 encoded protein insB 1024043 - 1024546 + | IS1 ORF2 TERM 1232 1025327 - 1025341 + F 72 -9.2 -3.61398 | opp_overlap 1025311 CCCGCGCTGCGTGAG CGGGCC AAT GGCCTG TTATTGCAAGGGCAG yohF 1025466 - 1026227 + | acetoin dehydrogenase TERM 1233 1026361 - 1026375 + T 80 -5.6 -5.06414 | GGGCAATGGTTTTAC GCCTGA TGA TCCGGC TTTTTCTTCCCGCGC yohD 1026971 - 1026357 - | hypothetical protein yohC 1027081 - 1027692 + | hypothetical protein TERM 1234 1027705 - 1027740 + F 86 -11.2 -3.75015 | overlap 1027706 TAGAAAGTTCTTTGA CGTTGCATTGCTGGCG TAAA TGTCAGCAATGCAGCA TTTCCTCACGATTCT TERM 1235 1027706 - 1027739 + F 87 -14.7 -2.84527 | overlap 1027705 AGAAAGTTCTTTGAC GTTGCATTGCTGGCG TAAA TGTCAGCAATGCAGC ATTTCCTCACGATTC TERM 1236 1028253 - 1028243 - g 81 -8.2 -4.3739 | opp_overlap 1028249 GATGTCTTCAGAAAA CCGC GCG GCGG CAAGCCTTGCACACC TERM 1237 1028770 - 1028754 - g 100 -10.8 -5.8096 | overlap 1028764 TATAAAAAACAAAAA GCCGCC CAAAT GGCGGC GGCGGGGCAGACGGC pbpG 1027857 - 1028798 + | D-alanyl-D-alanine endopeptidase TERM 1238 1028804 - 1028833 + T 88 -8.7 -4.74801 | gap 1, opp_overlap 1028804 1028807, overlap 1028807 GAACGATTAAGTGAA TGACGGATGGCGAT ACT AT-GCCATCCGTAA TTTTTACTCCACTTC TERM 1239 1028807 - 1028830 + T 74 -10.4 -3.28472 | gap 1, opp_overlap 1028807 1028804, overlap 1028804 CGATTAAGTGAATGA CGGATGGCGAT ACT AT-GCCATCCG TAATTTTTACTCCAC TERM 1240 1028830 - 1028807 - T 72 -10.4 -2.79684 | gap 1, opp_overlap 1028804 1028807, overlap 1028804 CGATTAAGTGAATGA CGGATGGCGAT ACT AT-GCCATCCG TAATTTTTACTCCAC dld 1030552 - 1028837 - | D-lactate dehydrogenase TERM 1241 1029819 - 1029806 - G 70 -6.7 -4.01703 | opp_overlap 1029805 AGAAGATTCAAATAA CCGAT CAGG ATCGG CGTTATAACGTGCGG TERM 1242 1032897 - 1032879 - g 75 -6.6 -4.37658 | AAGGCTTTGAGAAAA TCACCCTG AAA CCGGGCGA AACTCAGACTGTCAG bglX 1030748 - 1033045 + | beta-D-glucoside glucohydrolase, periplasmic TERM 1243 1033075 - 1033057 - f 74 -10.2 -3.15579 | opp_overlap 1033057 GTAATGCTTTAGTAA GGGCGCGA CGT TTGCGCCC TTTGCCTGATGTTCA TERM 1244 1033057 - 1033075 + F 93 -12.4 -3.71607 | opp_overlap 1033057 GTAATGCTTTAGTAA GGGCGCGA CGT TTGCGCCC TTTGCCTGATGTTCA TERM 1245 1033639 - 1033626 - g 73 -3.8 -4.84529 | CGAGAAAGTCAAAAA GCTC GATTCG GAGC ACAACAAGTTAATCT TERM 1246 1034137 - 1034120 - g 70 -3.5 -4.65895 | gap 1, overlap 1034131 GCCTCGATGCAAAAA CATTGCAG CAA CTG-AATG CCAGCATTGCTGTGG yehZ 1033297 - 1034214 + | putative transport system permease protein TERM 1247 1034282 - 1034292 + G 74 -8.2 -3.97368 | overlap 1034247 TGACGGCAATCGCAG CGGC GCT GCCG TTTATCAGTTACGCG TERM 1248 1034830 - 1034854 + G 90 -4.9 -5.39721 | GGCATCTGGTGCTAC TTTTCCACTGC TCG GCAGGGGGCAA TTTTTTCTCTGCTCA yehY 1034221 - 1035378 + | putative transport system permease protein yehX 1035371 - 1036297 + | putative ATP-binding component of a transport system TERM 1249 1036610 - 1036634 + G 72 -8.5 -3.83026 | GCCTGTCGCAGTGCT GGCGATTGCCG TTC CGGTGATCGGC TTTGGTCTGCAACCA yehW 1036302 - 1037033 + | putative transport system permease protein yehV 1037828 - 1037181 - | putative transcriptional regulator SBO_1018 1038156 - 1038458 + | IS600 ORF1 SBO_1019 1038599 - 1039312 + | IS600 ORF2 SBO_1020 1039708 - 1039505 - | unknown protein encoded within prophage TERM 1250 1039792 - 1039780 - R 83 -4.1 -5.28942 | overlap 1039781 TACCTTAAATAAAAA CCTGA TTA TCAAG CAGATATGCATGGAT TERM 1251 1040345 - 1040324 - R 100 -15.9 -4.3341 | CAAAATCAATATAAA CAGCCCCTC CGGA GAGGGGCTG GAGAGTGGCGCTATG insB 1041169 - 1040666 - | IS1 ORF2 SBO_1022 1041262 - 1041429 + | putative IS1 encoded protein TERM 1252 1041440 - 1041457 + F 100 -11.3 -5.4505 | opp_overlap 1041430 TATAACCCAGATTCG GGCACCA GAAA TGGTGCC TTTTTTATTGCAGAA TERM 1253 1041754 - 1041726 - g 84 -3.7 -5.2112 | overlap 1041728 1041735 AAGATGAGCAAAAAA CGCATTACAGCGA TAC CCGCTGGCATGAG GATTCCGTGCGTAAC SBO_1023 1041488 - 1042087 + | putative membrane protein precursor TERM 1254 1042115 - 1042134 + F 100 -10 -4.85599 | gap 1, opp_overlap 1042115 CACAGTGTTATGACA GCCCG-CTG GTT CAGGCGGGC TTTTTGTGGGGTGAA SBO_1024 1042151 - 1043566 + | putative tail fiber protein SBO_1025 1043517 - 1044140 + | putative tail component of prophage TERM 1255 1044255 - 1044278 + T 93 -10.2 -4.58395 | opp_overlap 1044252 1044251, overlap 1044257 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 1256 1044257 - 1044276 + T 100 -15 -3.90762 | opp_overlap 1044252 1044251, overlap 1044255 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_3 1045963 - 1044320 - | invasion plasmid antigen TERM 1257 1046239 - 1046271 + r 86 -13.6 -3.16564 | gap 1, opp_overlap 1046239 AAATCGTAAAGGAAA CCGTAGCACG-TCTT AAGC AAGAACGTGCTGCGG TTGGATGCTATTTTT TERM 1258 1046271 - 1046239 - R 89 -11.4 -4.08919 | gap 1, opp_overlap 1046239 AAATCGTAAAGGAAA CCGTAGCACG-TCTT AAGC AAGAACGTGCTGCGG TTGGATGCTATTTTT ybcY 1046710 - 1046279 - | hypothetical protein SBO_1028 1047122 - 1046949 - | putative IS1 encoded protein insB 1047215 - 1047718 + | IS1 ORF2 TERM 1259 1048085 - 1048065 - g 100 -7.5 -5.63236 | opp_overlap 1048065 AGCGAAAAAGAAAAA CCGCAGACG CGA CGTATGCAG GACGTGCTGCGGTTG SBO_1030 1048023 - 1048235 + | hypothetical protein SBO_1031 1049049 - 1048210 - | IS911 ORF2 TERM 1260 1048618 - 1048629 + g 77 -5.8 -4.63218 | opp_overlap 1048614 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 1261 1048970 - 1048990 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 1262 1049599 - 1049613 + r 78 -5.8 -4.77986 | opp_overlap 1049598 ACGATTTTAAGACAT TTTTTC CAA GAAAAA TTTTTAACTCTTTGA yodB 1050841 - 1050281 - | putative cytochrome TERM 1263 1051063 - 1051031 - R 83 -13 -3.14602 | gap 1, opp_overlap 1051029 1051037, overlap 1051029 GTTAGCTTATTAATA TACAGACACG-TCAT AGTG ATGAGCGTGTCTGTA GCTAGCTTGCGTTCA SBO_1033 1051804 - 1051154 - | hypothetical protein SBO_1034 1052697 - 1052062 - | putative sulfite oxidase subunit YedZ yedW 1054338 - 1055009 + | transcriptional regulatory protein YedW yedV 1055009 - 1056367 + | putative 2-component sensor protein TERM 1264 1056439 - 1056407 - T 100 -12.8 -5.055 | gap 1, opp_overlap 1056406 1056407 TTAACCGTGAAAAAA CGCAGCCACGTC-GT GAGT ACTAACGCGGCTGCG ATTAATTATGCGCTT insB 1057175 - 1056672 - | IS1 ORF2 SBO_1040 1057268 - 1057438 + | putative IS1 encoded protein SBO_1041 1057976 - 1057479 - | putative outer membrane porin protein C precurser SBO_1042 1058459 - 1058899 + | IS2 ORF2 TERM 1265 1059288 - 1059268 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 1266 1059640 - 1059629 - g 77 -5.8 -4.63218 | opp_overlap 1059634 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_1043 1059209 - 1059865 + | IS911 ORF2 SBO_1044 1060057 - 1060353 + | IS2 ORF2 TERM 1267 1060722 - 1060706 - f 100 -13.7 -5.97575 | AAGGCATAAAAAAAA GCCGGCA TCA TGCCGGC CCAAAAAATATAAAC TERM 1268 1060872 - 1060860 - f 79 -4.1 -5.13648 | overlap 1060855 CAAAGATAAATAAAA TCGCT CAA AACGA TTTTTCCTGTATTCA TERM 1269 1060977 - 1060962 - g 70 -4 -4.62471 | TCCAATGTGGAAAAA TGTGAC TTTT ATCACA TAATAGTACTAAGTC SBO_1045 1060935 - 1061318 + | hypothetical protein yedJ 1061358 - 1062053 + | hypothetical protein TERM 1270 1062091 - 1062111 + F 83 -13.3 -3.15999 | AATTATGTTAACCTG TCGGCCATC TCA GATGGCCGG TTAAATCTATGCAGG dcm 1062120 - 1063538 + | DNA cytosine methylase vsr 1063519 - 1063989 + | DNA mismatch endonuclease yedA 1064898 - 1063978 - | hypothetical protein yedI 1065071 - 1065988 + | hypothetical protein SBO_1051 1066067 - 1066249 + | hypothetical protein TERM 1271 1066292 - 1066264 - T 100 -20.4 -3.22491 | opp_overlap 1066269, overlap 1066252 AAAGGGTATCATTAA CACCAGGCCGGA TCACT TCCGGCCTGGTG TGCCAATGCCTGCAA TERM 1272 1066269 - 1066287 + T 76 -11.7 -2.62983 | opp_overlap 1066264 1066252 GTATCATTAACACCA GGCCGGA TCACT TCCGGCC TGGTGTGCCAATGCC SBO_1053 1068927 - 1068112 - | mannosyl-3-phosphoglycerate phosphatase TERM 1273 1069185 - 1069207 + H 100 -14.9 -5.88565 | opp_overlap 1069180 CTTAAGCAAGTTTCA TCCCGACCC CCTCA GGGTCGGGA TTTTTTTATTGTGCA dsrB 1069603 - 1069791 + | hypothetical protein TERM 1274 1069799 - 1069832 + T 85 -13.9 -3.04248 | opp_overlap 1069793 1069792, overlap 1069801 1069831 CAGAGTAATCTTATT CAGCCTGACTGGTGG GAAA CCACCAGTCAGAATG TGTTAGCGCATGTTG TERM 1275 1069801 - 1069830 + T 73 -10.7 -3.07522 | opp_overlap 1069793 1069792, overlap 1069799 GAGTAATCTTATTCA GCCTGACTGGTGG GAAA CCACCAGTCAGAA TGTGTTAGCGCATGT rcsA 1070458 - 1069835 - | positive regulator for ctr capsule biosynthesis, positive transcription factor fliR 1071528 - 1070743 - | flagellar biosynthesis protein FliR fliQ 1071806 - 1071537 - | flagellar biosynthesis protein FliQ TERM 1276 1072153 - 1072165 + r 72 -4.7 -4.57073 | opp_overlap 1072149 GCATAAACTCACGTA GCGGC TGC GCCCC TTTTTCCAGCGCCTC fliO 1072917 - 1072552 - | flagellar biosynthesis protein FliO fliN 1073333 - 1072920 - | flagellar motor switch protein FliN fliM 1074334 - 1073330 - | flagellar motor switch protein FliM fliL 1074803 - 1074339 - | flagellar basal body-associated protein FliL TERM 1277 1075244 - 1075263 + r 73 -7.9 -4.16842 | opp_overlap 1075237 ACCTAAATCCTGCGG GTGCAGA CGCAAC TCTGCAC TTTGTTGCCCCTGGC fliJ 1076471 - 1076028 - | flagellar biosynthesis chaperone TERM 1278 1076530 - 1076512 - H 72 -8.8 -3.63922 | overlap 1076510 ACTGTCGGGAAAATA CGCTCCAG CCC CTGGAGAG ACGCTTCCCAGTCCG TERM 1279 1077268 - 1077244 - H 74 -8.5 -3.95584 | CGTTCACCAATCAAA CCCACGACAAT GAC ATCGGCGCGGG TGTAACGTGCCATCA TERM 1280 1078681 - 1078661 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 1281 1079033 - 1079022 - g 77 -5.8 -4.63218 | opp_overlap 1079027 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_1067 1078602 - 1079441 + | IS911 ORF2 fliF 1082434 - 1080776 - | flagellar MS-ring protein TERM 1282 1081417 - 1081433 + g 70 -5.7 -4.38472 | overlap 1081418 TATTGCTGGTGGTGC TCGCCTG CTG CTGGCGG TTATTTTGATTTGCC TERM 1283 1082837 - 1082823 - g 93 -8.6 -4.88067 | ACGCAGGCAGAAAAA TTCACC CTC GGTGAA CCCGGCGTGGCGTTA fliE 1082649 - 1082963 + | flagellar hook-basal body protein FliE SBO_1072 1083291 - 1083121 - | putative IS1 encoded protein insB 1083384 - 1083887 + | IS1 ORF2 TERM 1284 1084108 - 1084089 - f 71 -7 -4.07568 | opp_overlap 1084079 1084076 CGGTGCGCCGTAAAA CCCCGTCC TTCA GGGCAGGG ATATAAGGCGTGGTT TERM 1285 1084460 - 1084470 + F 76 -4.6 -5.04249 | ACAATGCCTTCCACG CCGG ATA TCGG TTTCTTTTTTCACAG TERM 1286 1084851 - 1084820 - g 77 -5.9 -4.65895 | gap 1 TCCCCGATTCAAAAA GCGGGGA-CAGAAT GATGT ATTCCGCTACCCGC AGGGCGTTAAGCTCG TERM 1287 1085139 - 1085126 - g 73 -3.8 -4.83615 | overlap 1085135 CAGTTTTCAGAAAAA CCAG AAGAAG CTGG CGAGACTTCAGCGAC SBO_1074 1084566 - 1085714 + | putative virulence protein TERM 1288 1085715 - 1085698 - T 70 -9.9 -2.94888 | overlap 1085689 1085695 AACCCACCGAAATGA TTCAGGC GACA GCCTGAA CGTAGCAGGGAGCCT TERM 1289 1085737 - 1085787 + T 82 -7.6 -4.67234 | gap 1, overlap 1085738 AGGGAGCCTCGTCCT TCAGGGCGTGGAG-GATGTCAAC AAACAG GTTGAATTAACTCCGCGCCCTGG TTTTTGACATTACCT TERM 1290 1085738 - 1085786 + T 70 -8.9 -3.39618 | gap 1, overlap 1085737 GGGAGCCTCGTCCTT CAGGGCGTGGAG-GATGTCAAC AAACAG GTTGAATTAACTCCGCGCCCTG GTTTTTGACATTACC yedK 1086425 - 1085754 - | hypothetical protein TERM 1291 1086526 - 1086498 - R 77 -11.7 -2.77182 | opp_overlap 1086494 1086493 1086484, overlap 1086495 TGTCAGAGGCAACGA TGTTCCCGCTGTG GGC CACAGCGGGAATG AGGGATTACTTCTGA yedF 1086765 - 1086532 - | hypothetical protein yedE 1087967 - 1086762 - | putative inner membrane protein TERM 1292 1088556 - 1088541 - g 72 -8.2 -3.85698 | GCCGCGCTGGATAAA GCGCCG TTAC CGACGC CACTGCCGTAATGAA yedD 1088154 - 1088567 + | hypothetical protein TERM 1293 1088573 - 1088598 + T 74 -11.2 -2.79505 | gap 1, opp_overlap 1088573, overlap 1088572 1088575 ACTGCCGTAATGAAA TC-TCCCCGGC TTGCC GCCGGGGATGA ATTTAAATCACCTCT TERM 1294 1088598 - 1088573 - T 87 -11.2 -3.90291 | gap 1, opp_overlap 1088573 1088572 1088575 ACTGCCGTAATGAAA TC-TCCCCGGC TTGCC GCCGGGGATGA ATTTAAATCACCTCT TERM 1295 1088575 - 1088595 + T 83 -14 -2.66272 | opp_overlap 1088573, overlap 1088573 1088572 TGCCGTAATGAAATC TCCCCGGC TTGCC GCCGGGGA TGAATTTAAATCACC amyA 1090088 - 1088601 - | cytoplasmic alpha-amylase fliS 1090942 - 1090532 - | flagellar protein FliS fliD 1092373 - 1090967 - | flagellar capping protein TERM 1296 1093228 - 1093191 - g 76 -7.7 -4.1711 | gap 1 ACTATTGCGAACAAA GCTGCTACAGTCAGCGAT CTG ACCGCTG-CTGGTGCAAC GGGAACAGGTCCTTA fliC 1092639 - 1094345 + | flagellin TERM 1297 1094520 - 1094536 + F 100 -15.1 -5.28176 | GTCAGCAACGTGCTT CCCCGCC ACC GGCGGGG TTTTTTCTGCATGGA TERM 1298 1094708 - 1094720 + G 71 -9.1 -3.49653 | opp_overlap 1094707 1094706 TAATGGATAAACACT CGCTG TGG CAGCG TTATGTCCCGCTGGT TERM 1299 1095270 - 1095247 - g 72 -4.6 -4.59773 | CCGGAGCGCGAAAAA CTGGTATTAA CCCT CTATTACCAG GAAGAGCTGAATCTC fliA 1094665 - 1095384 + | flagellar biosynthesis sigma factor fliZ 1095394 - 1095981 + | protein FliZ TERM 1300 1096545 - 1096522 - g 79 -2.3 -5.22039 | CTGAAAGGCAAAAAA GTGGGTGTC GGTCTG GGCACCAAC TATGAAGAGTGGCTG TERM 1301 1096705 - 1096691 - g 84 -7.8 -4.63486 | ATCTGGTGAAGAAAA CCAACG ATA CGCTGG CAGTAACCGGTGAAG fliY 1096069 - 1096869 + | cystine transporter subunit TERM 1302 1096908 - 1096889 - f 84 -4.9 -5.39755 | opp_overlap 1096890, overlap 1096890 CATAATGACAAAAAA GGGCGCT TTCACT AGCGCCT TTTTTATTTACGCGT TERM 1303 1096907 - 1096890 - f 72 -8.4 -3.82226 | opp_overlap 1096890, overlap 1096889 ATAATGACAAAAAAG GGCGCT TTCACT AGCGCC TTTTTTATTTACGCG TERM 1304 1096890 - 1096907 + F 100 -8.4 -5.63517 | opp_overlap 1096890 1096889 ATAATGACAAAAAAG GGCGCT TTCACT AGCGCC TTTTTTATTTACGCG yedO 1096974 - 1097960 + | D-cysteine desulfhydrase TERM 1305 1098126 - 1098141 + G 81 -4.6 -5.08178 | overlap 1098127 CGCCAATCTGGCCCG TGCGCT GGCT GGCGCG TTTTTATATCTCTAT TERM 1306 1098418 - 1098430 + G 72 -7.7 -3.95787 | GGTGGCGTTGCCGCC GCTGT CGA ACAGC TTTATCAGTCTGGTA yecS 1097975 - 1098643 + | putative transport system permease protein TERM 1307 1099256 - 1099282 + G 81 -6.4 -4.84359 | opp_overlap 1099251, overlap 1099258 CGCACGAAATGAGCT TTGCCCGGGATG TTG CGGACCGGGCGA TTTTTATGGACCTGG yecC 1098640 - 1099392 + | putative amino-acid ABC transporter ATP-binding protein YecC TERM 1308 1099433 - 1099403 - f 89 -5.3 -5.70522 | gap 1, opp_overlap 1099427 1099428, overlap 1099404 1099406 AATAATAAGAAAAAA TCAGCCCCGAC-GA TTCA CCTGTCGGGGCGGG ACGCCATTTCAAGCG TERM 1309 1099432 - 1099404 - f 77 -8.8 -3.98653 | gap 1, opp_overlap 1099427 1099428, overlap 1099403 1099406 ATAATAAGAAAAAAT CAGCCCCGAC-GA TTCA CCTGTCGGGGCGG GACGCCATTTCAAGC TERM 1310 1099430 - 1099406 - f 75 -10 -3.54636 | gap 1, opp_overlap 1099427 1099428, overlap 1099404 1099403 AATAAGAAAAAATCA GCCCCGAC-GA TTCA CCTGTCGGGGC GGGACGCCATTTCAA sdiA 1099622 - 1100344 + | DNA-binding transcriptional activator SdiA TERM 1311 1100372 - 1100408 + T 81 -12.4 -3.14051 | opp_overlap 1100377, overlap 1100377 CTGCGTGCCAGATGC AAAAACCGGCTGAAAG GCACG CTCTCAGCCGGTTTTA TATTACTGACGGTAG TERM 1312 1100403 - 1100377 - T 100 -14.5 -4.70659 | opp_overlap 1100372 1100377 TGCCAGATGCAAAAA CCGGCTGAAAG GCACG CTCTCAGCCGG TTTTATATTACTGAC TERM 1313 1100377 - 1100403 + T 100 -12.3 -4.70583 | opp_overlap 1100377, overlap 1100372 TGCCAGATGCAAAAA CCGGCTGAAAG GCACG CTCTCAGCCGG TTTTATATTACTGAC yecF 1100635 - 1100411 - | hypothetical protein TERM 1314 1100483 - 1100494 + g 81 -5.8 -4.77986 | GGTTTCGTCTTCGAT CAGC GCAA GCTG TTTTTCCATCTTTAA TERM 1315 1100843 - 1100854 + H 73 -4.4 -4.80167 | ATTAATGTTACATAT TCAG CGGG CTGA TTTTCATTTTTGCTG uvrY 1101093 - 1101749 + | response regulator uvrC 1101746 - 1103578 + | excinuclease ABC subunit C pgsA 1103635 - 1104183 + | phosphatidylglycerophosphate synthetase TERM 1316 1104377 - 1104361 - f 73 -10.9 -2.62616 | opp_overlap 1104376 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG AGGTCTCGAGTTCGA TERM 1317 1104441 - 1104419 - f 73 -7.7 -4.13767 | CGCTCCAGTTTAAAA GACATCGGC GTCAA GCGGATGTC TGGCTGAAAGGCCTG TERM 1318 1104596 - 1104576 - f 72 -10.5 -2.89742 | overlap 1104579 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGTTCGCGCTGTGC TERM 1319 1104684 - 1104697 + F 100 -8.1 -5.64274 | opp_overlap 1104684 AGCAGTGTCGTGAAA CCACC TTCG GGTGG TTTTTTTGTGCCTGC TERM 1320 1104779 - 1104767 - f 78 -6.3 -4.69027 | AAAGCCACTCAAAAA GTATC TCT GATAC GGACCGGCATGTAAG yecA 1104833 - 1105498 + | hypothetical protein tyrP 1106771 - 1105560 - | tyrosine-specific transport system TERM 1321 1105810 - 1105800 - G 72 -8.2 -3.7229 | overlap 1105801 ATAAAACAGTGCAAA CGCC AAC GGCG GCAGAAAGGTAATTG TERM 1322 1106728 - 1106677 - G 70 -5.9 -4.20354 | gap 3, opp_overlap 1106684 1106685, overlap 1106681 1106684 AACGTAACGCTAAAA CCAACACCTGCCGCAGCCA-GC-GGC ATT GCCAGCATGCCTGCGCCAATTGT-GG TTCCCGCCACGATAA yecH 1106962 - 1107201 + | hypothetical protein TERM 1323 1107231 - 1107209 - T 100 -16.3 -3.61178 | opp_overlap 1107205, overlap 1107222 GTCACTGATTTGAAA CGGCGGCAG TAAAC CTGCCGCCG GAGAGTATTAGTTTT ftn 1107736 - 1107239 - | ferritin TERM 1324 1107868 - 1107905 + r 82 -11.5 -3.53012 | opp_overlap 1107858 1107879, overlap 1107870 ACGCATTACCGCTAT TTTTTTAATCAGCGAAG ATCC CCTCGCTGATTAAAATA TTTAGAGAAAGACAG TERM 1325 1107870 - 1107903 + r 90 -14.1 -3.34398 | opp_overlap 1107858 1107879, overlap 1107868 GCATTACCGCTATTT TTTTAATCAGCGAAG ATCC CCTCGCTGATTAAAA TATTTAGAGAAAGAC SBO_1102 1108230 - 1107907 - | hypothetical protein TERM 1326 1108313 - 1108301 - H 76 -9.1 -3.68036 | opp_overlap 1108300 1108297 1108301 1108305, overlap 1108299 AATGACCGGAAAAGA CGCCT GGC AGGCG CTATTTCTTGCCATC TERM 1327 1108607 - 1108580 - H 73 -10 -3.30007 | opp_overlap 1108580 1108587, overlap 1108587 AATATGTTCCGATAA CAAAAAACCTGC TCCG GCAGGTTTTTTT GTGTCCTGATGACGG TERM 1328 1108600 - 1108587 - H 100 -8.1 -5.55769 | opp_overlap 1108580 1108587, overlap 1108580 TCCGATAACAAAAAA CCTGC TCCG GCAGG TTTTTTTGTGTCCTG TERM 1329 1108587 - 1108600 + H 100 -8.1 -5.74122 | opp_overlap 1108587 1108580, overlap 1108580 TCCGATAACAAAAAA CCTGC TCCG GCAGG TTTTTTTGTGTCCTG SBO_1103 1108694 - 1108945 + | hypothetical protein TERM 1330 1108951 - 1108978 + T 95 -13.5 -3.86822 | opp_overlap 1108951 ATCCCATTAAAAAAA CCGCTGCTTCA AACAGA TGAGGCAGCGG TTTCTCAAAAACTTC TERM 1331 1108978 - 1108951 - T 100 -11.3 -5.52986 | opp_overlap 1108951 ATCCCATTAAAAAAA CCGCTGCTTCA AACAGA TGAGGCAGCGG TTTCTCAAAAACTTC TERM 1332 1109022 - 1108990 - T 78 -6.2 -4.56597 | opp_overlap 1108993 1108995, overlap 1108991 GCGGTTTCTCAAAAA CTTCATCGGCGCAA TGTAT TAGCGCCGATGTAT GATCAATGCAGCTGG TERM 1333 1109021 - 1108991 - T 73 -9.7 -3.33744 | opp_overlap 1108993 1108995, overlap 1108990 CGGTTTCTCAAAAAC TTCATCGGCGCAA TGTAT TAGCGCCGATGTA TGATCAATGCAGCTG TERM 1334 1108993 - 1109019 + T 79 -12.3 -2.80816 | opp_overlap 1108991 1108990, overlap 1108995 GTTTCTCAAAAACTT CATCGGCGCAA TGTAT TAGCGCCGATG TATGATCAATGCAGC yecI 1109528 - 1109025 - | ferritin-like protein TERM 1335 1109127 - 1109150 + g 70 -5.2 -4.41633 | ATCAAGAATGGTTTG CAGCAACAGG CCAT CATGCTGCTG TTCTTTTTCCAGATC TERM 1336 1110271 - 1110283 + H 78 -6.3 -4.62069 | opp_overlap 1110271 TTCCGATTAATTTAA CGAAT GTC ATTCG TTTTTGCCCTACACA TERM 1337 1111353 - 1111327 - H 93 -10.8 -4.57341 | overlap 1111328 1111329 AATTTGCCGGAAAAA TTCCCCTCTGCA TGA TGCAGAGGGGGT GTGAACGACCAGTGA TERM 1338 1111352 - 1111328 - H 93 -14.3 -3.33922 | overlap 1111327 1111329 ATTTGCCGGAAAAAT TCCCCTCTGCA TGA TGCAGAGGGGG TGTGAACGACCAGTG TERM 1339 1111351 - 1111329 - H 100 -17.8 -2.60032 | overlap 1111328 1111327 TTTGCCGGAAAAATT CCCCTCTGCA TGA TGCAGAGGGG GTGTGAACGACCAGT araG 1111383 - 1112897 + | L-arabinose transporter ATP-binding protein araH 1112909 - 1113898 + | L-arabinose transporter permease protein TERM 1340 1113937 - 1113962 + F 100 -14.8 -3.81414 | opp_overlap 1113939 1113944 CGTTTTTTCCCACCA CAGCCAACCG CCATAA CGGTTGGCTG TTCTTCGTTGCAAAT TERM 1341 1113960 - 1113939 - f 79 -12.3 -2.78384 | opp_overlap 1113937, overlap 1113944 TTTTTTCCCACCACA GCCAACCGC CATA ACGGTTGGC TGTTCTTCGTTGCAA TERM 1342 1114631 - 1114644 + F 75 -9.5 -3.5241 | overlap 1114628 1114638 GGAAGCTCCCTTTAT CGGGC GAAC GCCCG TATTTCTGGGCGATG TERM 1343 1116191 - 1116171 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 1344 1116543 - 1116532 - g 77 -5.8 -4.63218 | opp_overlap 1116537 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_1110 1116112 - 1116600 + | IS911 ORF2 insB 1116845 - 1117348 + | IS1 ORF2 SBO_1112 1117368 - 1117727 + | IS911 ORF2 yecG 1118717 - 1118289 - | universal stress protein UspC TERM 1345 1118375 - 1118342 - G 85 -14.1 -2.75382 | gap 1, opp_overlap 1118340, overlap 1118339 CACTTGAGGCAATCA CTCTTTTCGCCGAGCA GGA TGCTC-GCGAAAAGAA ACTGTGATTGTGATT TERM 1346 1119218 - 1119237 + H 72 -9.4 -3.63515 | AGTAATTGAGTGTTT TGTGTGAT CTGC ATCACACA TTATTGAAAATCGCA flhD 1119487 - 1119846 + | transcriptional activator FlhD flhC 1119849 - 1120415 + | transcriptional activator FlhC TERM 1347 1120442 - 1120465 + F 100 -12.5 -5.75342 | TGGCGCAACATGCCA GCAGCGGTA ACGACG TACCGCTGC TTTTTTTTGCCCCAA cheR 1120601 - 1121365 + | chemotaxis methyltransferase CheR cheB 1121368 - 1122306 + | protein methylesterase cheY 1122321 - 1122710 + | chemotaxis regulatory protein CheY TERM 1348 1122790 - 1122812 + G 74 -9.8 -3.53811 | overlap 1122778 GCGCGCATCGGCAGC CTGACGCGTA TGC TGCGCGACAG TTTGCGGGAACTGGG cheZ 1122721 - 1123365 + | chemotaxis regulator CheZ TERM 1349 1123372 - 1123407 + F 82 -13.4 -2.78596 | GGATTTTGATTTGTA TTGCCTGATGTGGCGT GACC ACGTCATATCAGGCGG TCTGATAAGGCGATG TERM 1350 1124072 - 1124056 - g 84 -7.9 -4.62783 | CAGCCACCTGAAAAA GCTGCGA ATG TCGCGGC AGGATATTCGTGATG TERM 1351 1124500 - 1124520 + G 72 -4.6 -4.63218 | ACAACCTACTCATCT TCCGGTGC CGGAA GCCCTGGA TTTTATTAACGAGAA flhB 1123520 - 1124551 + | flagellar biosynthesis protein FlhB flhA 1124544 - 1126622 + | flagellar biosynthesis protein FlhA TERM 1352 1126783 - 1126805 + G 76 -10.6 -3.28712 | TTCAGGATTGATGAC GCTGGTAGCG TGG CGTTATCAGC TTATCGGCCCGACAC flhE 1126622 - 1127014 + | flagellar protein yecT 1127643 - 1127134 - | hypothetical protein TERM 1353 1127752 - 1127777 + r 100 -17.7 -3.83026 | opp_overlap 1127752 GATGGCAATAAAAAA GCCTGATCAGG TAAC CCTGATCAGGC TTTACTCTCACGAAA TERM 1354 1127777 - 1127752 - R 100 -17.7 -5.46657 | opp_overlap 1127752 GATGGCAATAAAAAA GCCTGATCAGG TAAC CCTGATCAGGC TTTACTCTCACGAAA argS 1129532 - 1127799 - | arginyl-tRNA synthetase TERM 1355 1128212 - 1128222 + g 70 -4.6 -4.57569 | overlap 1128218 AGTCGAAGATGTAGT CCGT GGT GCGG TTTTTGGAGAGATCC TERM 1356 1129472 - 1129451 - G 70 -10.1 -3.18264 | TTGCTGACTGACGAA CCTGCGGTT CGCA ATCCGCAGG CGCGCCTGCCGCAAT TERM 1357 1129573 - 1129555 - H 77 -11 -3.20382 | CCTTACATTGATGAA GCGAGCAA AAA TTGCCCGC ACCAGTTAAAGAAAT TERM 1358 1129917 - 1129897 - g 72 -6.7 -4.25104 | opp_overlap 1129902 1129911 GCGTTGCCATCAAAA CGTCACCGC TGA GCGCTGGCG TCGCGGTTTTGAACA yecM 1129742 - 1130314 + | hypothetical protein cutC 1130328 - 1131074 + | copper homeostasis protein CutC TERM 1359 1131122 - 1131146 + T 100 -10 -5.64274 | TGCTTGCTCGTACCA GGCCCCTG CAATTTCGA CAGGGGCC TTTTTTTATCCCTGA TERM 1360 1131793 - 1131767 - T 73 -11 -2.55585 | overlap 1131766 1131764 1131788 CGGCAAAATAGACAG TGACGATAAGTT CGA AACTCATCGCCA GGAAATGGCCGAAAC SBO_1128 1132261 - 1132058 - | putative IS1 encoded protein insB 1132336 - 1132839 + | IS1 ORF2 TERM 1361 1134463 - 1134442 - T 77 -11.5 -3.28745 | opp_overlap 1134440 1134439, overlap 1134444 GGCGTAAGAAGTGAA TAGCGCCCG GAAA CGGGCGCTG AGGTTATGCAAACGT TERM 1362 1134461 - 1134444 - T 86 -14.1 -3.20751 | opp_overlap 1134440 1134439, overlap 1134442 CGTAAGAAGTGAATA GCGCCCG GAAA CGGGCGC TGAGGTTATGCAAAC yecP 1135569 - 1134598 - | putative enzyme yecO 1136309 - 1135566 - | hypothetical protein yecN 1136670 - 1136350 - | hypothetical protein TERM 1363 1137159 - 1137139 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT SBO_1134 1137080 - 1137454 + | IS911 ORF2 TERM 1364 1137515 - 1137503 - f 72 -4.8 -4.63218 | CTGTTCGCAATAAAA CCAG TGGGG CTGG GGCCATGTCGTTCTC SBO_1135 1137550 - 1137924 + | IS911 ORF2 SBO_1136 1138087 - 1138296 + | hypothetical protein SBO_1137 1138702 - 1140306 + | hypothetical protein TERM 1365 1140492 - 1140505 + F 100 -8.1 -5.71712 | overlap 1140483 ATACTGGCGACACGT GACGC GTCT GCGTC TTTTTTTATGTCGCG SBO_1138 1140677 - 1141138 + | hypothetical protein SBO_1139 1141135 - 1141341 + | transcriptional regulatory protein TERM 1366 1141348 - 1141381 + F 100 -15.4 -4.99043 | gap 2 TACCGCTGATGTTCC TGCGGCGCAGC--CCG GATA CGGAAGCTGCGCCGCA TTTTGTTTATCCGAA TERM 1367 1142301 - 1142329 + F 100 -14.6 -5.24129 | opp_overlap 1142295 1142304, overlap 1142302 TTTATGTAACCTGAA CGAGGGCGCTGT CACAT ACAGCGCCCTCA TTTTTTATAACAACA TERM 1368 1142302 - 1142328 + F 100 -18.1 -3.73995 | opp_overlap 1142295 1142304, overlap 1142301 TTATGTAACCTGAAC GAGGGCGCTGT CACAT ACAGCGCCCTC ATTTTTTATAACAAC TERM 1369 1142326 - 1142304 - f 86 -14.9 -2.7566 | opp_overlap 1142302 1142301, overlap 1142295 ATGTAACCTGAACGA GGGCGCTGT CACAT ACAGCGCCC TCATTTTTTATAACA TERM 1370 1142801 - 1142756 - f 93 -15.6 -2.78935 | gap 1, opp_overlap 1142753, overlap 1142738 AGATGCTGCACCAGA TCCGTGCGTCACTTTAACCGC GCAAA GCGGG-AAAGTGACGCACGCA AGCCCTTTCGACCTG SBO_1140 1143130 - 1143561 + | putative integrase SBO_1141 1143638 - 1143913 + | IS629 ORF1 TERM 1371 1144233 - 1144221 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_1142 1143913 - 1144800 + | IS629 ORF2 TERM 1372 1145269 - 1145255 - T 79 -2.7 -5.31275 | CGGGATTAGAAAAAA CAGCC CTGAC GGCAG CATTCACCCGGACGG TERM 1373 1145650 - 1145624 - T 100 -11 -5.64006 | ATGCAATTAAAAAAA GACCGAATAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT TERM 1374 1145811 - 1145840 + T 89 -5.1 -5.7946 | gap 2, opp_overlap 1145811 GCTGAAATGTTAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA SBO_1143 1146218 - 1145877 - | hypothetical protein TERM 1375 1147079 - 1147069 - R 71 -6.8 -4.02132 | GGTGAAATGGATAAA TCGC AGC GCGA TCCAGGTAAACGCCA SBO_1145 1147476 - 1147102 - | hypothetical protein holE 1147615 - 1147845 + | DNA polymerase III subunit theta SBO_1147 1147947 - 1148603 + | hypothetical protein TERM 1376 1148666 - 1148652 - g 70 -7.1 -4.1399 | overlap 1148648 TTATCGATACAGAAA CCTGC GGTTT GCAGG GAGGGATCGTTGAGA SBO_1148 1148627 - 1149289 + | exodeoxyribonuclease X SBO_1149 1150283 - 1149396 - | IS629 ORF2 TERM 1377 1149963 - 1149975 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_1150 1150558 - 1150283 - | IS629 ORF1 SBO_1151 1151741 - 1152043 + | IS600 ORF1 SBO_1152 1152523 - 1152915 + | IS600 ORF2 TERM 1378 1153160 - 1153144 - T 70 -2.2 -4.96501 | gap 1, opp_overlap 1153145, overlap 1153145 CGGCAGAAAAACAAA CGGCTCG GCAT CG-GCCA TTTCCGCGTCCAGCA TERM 1379 1153562 - 1153552 - T 74 -5.4 -4.67982 | opp_overlap 1153560 GCCCATCGAATAAAA CTCA CTA TGAG CTGCGCGCTTATTGG yebE 1154794 - 1154135 - | hypothetical protein TERM 1380 1154541 - 1154553 + g 74 -3.3 -4.88684 | overlap 1154541 TGCGGTTCGTCCTGA TGCGC CGC GCGAA TTTTATCTTTGTATT yebF 1155489 - 1155121 - | hypothetical protein TERM 1381 1155304 - 1155316 + g 75 -4.7 -4.73613 | overlap 1155305 TTGATCATCTGCCCA ACGCG CCA CGCGA TTTTGTTGATAATCA yebG 1155838 - 1155578 - | DNA damage-inducible protein YebG purT 1155972 - 1157150 + | phosphoribosylglycinamide formyltransferase 2 TERM 1382 1157176 - 1157196 + T 100 -13.3 -4.4267 | opp_overlap 1157176 1157177, overlap 1157177 AAAACGCTACAAAAA TGCCCGATC GTA GATCGGGCG TTTTGACTTTTACAG TERM 1383 1157196 - 1157176 - T 100 -11.1 -4.90296 | opp_overlap 1157176 1157177, overlap 1157177 AAAACGCTACAAAAA TGCCCGATC GTA GATCGGGCG TTTTGACTTTTACAG TERM 1384 1157177 - 1157195 + T 90 -14.6 -3.24879 | opp_overlap 1157176 1157177, overlap 1157176 AAACGCTACAAAAAT GCCCGATC GTA GATCGGGC GTTTTGACTTTTACA TERM 1385 1157195 - 1157177 - T 95 -14.6 -3.52551 | opp_overlap 1157177 1157176, overlap 1157176 AAACGCTACAAAAAT GCCCGATC GTA GATCGGGC GTTTTGACTTTTACA eda 1157847 - 1157206 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1386 1157802 - 1157790 - G 71 -9.1 -3.44051 | opp_overlap 1157798 1157799, overlap 1157799 TTTTTACCACGATAA CCGGT ACA ACCGG GCCGGTGGTCAGGAT TERM 1387 1157908 - 1157925 + r 82 -7.7 -4.56597 | GATACAGGTTGCGCC CTGTTCG GCAC CGGACAG TTTTTCACGCAAGGC edd 1159695 - 1157884 - | phosphogluconate dehydratase TERM 1388 1159850 - 1159825 - R 100 -11.2 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGTG-GG TGAAT CCGCACGAGGC CTGAAAGTGTAAAAA zwf 1161405 - 1159930 - | glucose-6-phosphate 1-dehydrogenase TERM 1389 1161365 - 1161331 - G 89 -13.6 -3.22388 | overlap 1161335 CAGGGAAGGCAGCAA TTTACGACGCGCAAGG TCG CCTTTCGCGCCGAAAA TGACCAGGTCACAGG TERM 1390 1161361 - 1161335 - G 90 -14.4 -2.57721 | overlap 1161331 GAAGGCAGCAATTTA CGACGCGCAAGG TCG CCTTTCGCGCCG AAAATGACCAGGTCA TERM 1391 1161553 - 1161539 - H 71 -7 -4.15565 | overlap 1161540 GCGATTACGGGAAAA GCGCGC AAA GCGCGG CAAAACTGATAAAAA TERM 1392 1161552 - 1161540 - H 73 -10.5 -3.09018 | overlap 1161539 CGATTACGGGAAAAG CGCGC AAA GCGCG GCAAAACTGATAAAA TERM 1393 1161777 - 1161762 - g 81 -4.7 -5.02476 | overlap 1161751 ATATGCTGGAAAAAA TCCAG TCTCAG CTGGA ACATTTGAGCAAATC yebK 1161743 - 1162612 + | DNA-binding transcriptional regulator HexR TERM 1394 1163078 - 1163067 - g 95 -5.8 -5.38054 | GGCGACAAAGAAAAA GTCG GTAT CGAC TACAAAGGCCTGCCT pykA 1162740 - 1164182 + | pyruvate kinase TERM 1395 1164190 - 1164215 + F 95 -14.7 -3.53444 | opp_overlap 1164184, overlap 1164192 TAGAGTAATCTCACC TGCCCCGGCCG CTGA TGGCCGGGGTA TTTAGCAACACATAA TERM 1396 1164192 - 1164213 + F 100 -15.1 -3.34517 | opp_overlap 1164184, overlap 1164190 GAGTAATCTCACCTG CCCCGGCCG CTGA TGGCCGGGG TATTTAGCAACACAT insB 1164772 - 1165275 + | IS1 ORF2 ycgK 1165642 - 1165286 - | hypothetical protein TERM 1397 1165737 - 1165749 + H 74 -3.3 -5.00616 | opp_overlap 1165737 1165738, overlap 1165722 CTGCGTTCGGTAAAA TCCCG GCG CGGCA TTTTTTGCCGGGGGG ycgL 1165851 - 1166177 + | hypothetical protein SBO_1166 1166249 - 1166908 + | hypothetical protein ycgN 1167000 - 1167446 + | hypothetical protein SBO_1168 1167749 - 1167477 - | putative IS1 encoded protein insB 1167824 - 1168327 + | IS1 ORF2 insB 1169110 - 1168607 - | IS1 ORF2 TERM 1398 1170058 - 1170035 - g 76 -7.5 -4.23054 | ATACATTACTGAAAA TATGCACAG TGAGAT CCGTGCATA CCACGAAGATGCAGG SBO_1171 1169346 - 1171004 + | putative alpha-mannosidase TERM 1399 1171065 - 1171086 + T 100 -13.1 -6.25578 | opp_overlap 1171065 TTTTTATCGAGTACA GCCTCTCAA TAAT TTGAGAGGC TTTTTTTTATTTGAT TERM 1400 1171086 - 1171065 - T 82 -13.1 -2.80816 | opp_overlap 1171065 TTTTTATCGAGTACA GCCTCTCAA TAAT TTGAGAGGC TTTTTTTTATTTGAT msbB 1172064 - 1171093 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1401 1171575 - 1171563 - G 79 -4.7 -4.9755 | opp_overlap 1171563 AGACATAATCAAAAA CCGGG TTG CCCTG ATTATGGAACATCGC TERM 1402 1172167 - 1172145 - R 100 -10.6 -5.99154 | CACCAAATAAAAAAA GCCGGTAC TGACTGC GTACCGGC TGCGAATGGATGTTA yebA 1173506 - 1172184 - | hypothetical protein TERM 1403 1172885 - 1172901 + g 81 -10.1 -3.87815 | opp_overlap 1172896, overlap 1172872 CTGCGCTCACTTCGG CGCTGGT TAA ACCGGCG TTTCTGGCGCTGGCA znuA 1174454 - 1173522 - | high-affinity zinc transporter periplasmic component TERM 1404 1173798 - 1173809 + g 72 -4.4 -4.59773 | ATGACCAAGCGGTGT CAGT CCGA ACTG TTTTTCGAAATAGCC TERM 1405 1174050 - 1174063 + g 74 -2.4 -5.03715 | overlap 1174039 1174035 GAAATCGCCGTGATG GTGA TCTTCT TCAC TTTTTTCCGCGTGGT TERM 1406 1175140 - 1175168 + G 72 -4.4 -4.69487 | overlap 1175132 1175131 1175142 TTTGTTGTTCCGGCA CACCGGAAGTTG TTTCC CTACATCCGGAG TTTATTTCTATGTTT znuC 1174533 - 1175288 + | high-affinity zinc transporter ATPase znuB 1175285 - 1176070 + | high-affinity zinc transporter membrane component ruvB 1177130 - 1176120 - | Holliday junction DNA helicase B ruvA 1177750 - 1177139 - | Holliday junction DNA helicase motor protein TERM 1407 1177819 - 1177800 - R 93 -6.4 -5.67063 | overlap 1177801 TGTATGATAAAAAAA TGCTGGAT AGAT ATCCAGCG AAGGATGAAGAAAAC TERM 1408 1177818 - 1177801 - R 80 -9.9 -3.99153 | overlap 1177800 GTATGATAAAAAAAT GCTGGAT AGAT ATCCAGC GAAGGATGAAGAAAA SBO_1179 1178247 - 1178071 - | putative IS1 encoded protein SBO_1180 1178545 - 1178910 + | insertion sequence 2 OrfA protein SBO_1181 1178934 - 1179314 + | IS2 ORF2 SBO_1182 1179280 - 1179759 + | IS2 ORF2 insB 1179734 - 1180165 + | IS1 ORF2 SBO_1184 1180773 - 1180252 - | IS911 ORF2 TERM 1409 1180660 - 1180671 + gT 77 -5.8 -4.63218 | opp_overlap 1180656 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG SBO_1185 1181092 - 1180742 - | IS911 ORF2 TERM 1410 1181013 - 1181033 + gr 70 -4 -4.65838 | gap 1 AATACAGCCCGTCTG CCGTC-TGG TTTT TCACGACGG TTTTTCCAGTATCTG TERM 1411 1181566 - 1181541 - R 79 -10.4 -3.61178 | opp_overlap 1181557 CGGAGGGAGTTGAAA CGCCTCAGCC TGAACT GACCGAGGCG GTATAACTTAACGCA ruvC 1182095 - 1181574 - | Holliday junction resolvase TERM 1412 1181862 - 1181874 + g 72 -4.7 -4.59773 | overlap 1181863 CTGCCCCAGTTTCAG AGCCG AGT CGGCA TTTTTGGCCATAAAG yebC 1182870 - 1182130 - | hypothetical protein TERM 1413 1182448 - 1182459 + g 79 -3.6 -5.14563 | overlap 1182429 ATCGCCTTTCTCGAA GGTG ATCA CGCC TTTTTTGCTGAACAG ntpA 1183351 - 1182899 - | dATP pyrophosphohydrolase aspS 1185241 - 1183469 - | aspartyl-tRNA synthetase SBO_1190 1185518 - 1185805 + | hypothetical protein TERM 1414 1187140 - 1187168 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SBO_1191 1185997 - 1187193 + | ISSfl2 ORF yecD 1187232 - 1187567 + | hypothetical protein SBO_1193 1187922 - 1188170 + | hypothetical protein TERM 1415 1188743 - 1188762 + T 100 -7.8 -5.7946 | TAAAACTCATGGTTC CGGGACTG GTCG TGGTCCCG TTTTTTTATTCAGCC SBO_1194 1188984 - 1188772 - | hypothetical protein TERM 1416 1189593 - 1189617 + r 72 -8.5 -3.76952 | overlap 1189594 CTCCCCCTTCTGAAT GCGTGGGGTGA GTG TCACCCCACAA TTTAAATTCAGTAGA TERM 1417 1189594 - 1189616 + r 77 -12 -2.8585 | overlap 1189593 TCCCCCTTCTGAATG CGTGGGGTGA GTG TCACCCCACA ATTTAAATTCAGTAG SBO_1195 1190245 - 1189658 - | putative tail fiber protein TERM 1418 1189777 - 1189741 - GR 83 -13.2 -3.05384 | gap 1, opp_overlap 1189741 1189731, overlap 1189743 TGCCGTTGTAGTTAA GACGCAGACGTT-TTTC ACCA GATATAACGTCTGCGTC TTCAGTTACCAGTTT TERM 1419 1189741 - 1189777 + gr 85 -13.2 -3.18467 | gap 1, opp_overlap 1189741 1189743, overlap 1189731 TGCCGTTGTAGTTAA GACGCAGACGTT-TTTC ACCA GATATAACGTCTGCGTC TTCAGTTACCAGTTT TERM 1420 1189775 - 1189743 - GR 70 -10 -3.08679 | gap 1, opp_overlap 1189741 1189731, overlap 1189741 CCGTTGTAGTTAAGA CGCAGACGTT-TTTC ACCA GATATAACGTCTGCG TCTTCAGTTACCAGT TERM 1421 1189851 - 1189831 - GR 77 -9.7 -3.62539 | overlap 1189827 GAGCAATTAAACCAA CCGACGTTT GCC AACCGTCGG CAGAGTACTGTATCT SBO_1196 1191065 - 1190211 - | putative tail component encoded by cryptic prophage CP-933M TERM 1422 1190442 - 1190460 + gr 71 -2.3 -5.02074 | overlap 1190441 CCTGACTGCATTACC GGCTGCA CTTTC TGCCGTC TTTTTTGACAACTCA TERM 1423 1191083 - 1191102 + r 77 -12.1 -2.79501 | opp_overlap 1191083 TCACCCCACAAAAAA GCCCGCC TGAACC GGCGGGC TGTCATGACACTGTG TERM 1424 1191102 - 1191083 - R 100 -12.1 -5.26316 | opp_overlap 1191083 TCACCCCACAAAAAA GCCCGCC TGAACC GGCGGGC TGTCATGACACTGTG SBO_1197 1191729 - 1191130 - | putative membrane protein precursor TERM 1425 1191777 - 1191760 - R 100 -12.7 -5.4505 | opp_overlap 1191758 1191764 1191776 TTCTGCAATAAAAAA GGCGCCA TTTC TGGCGCC CGTATATGGGTTATA SBO_1198 1195270 - 1191797 - | host specificity protein TERM 1426 1195337 - 1195311 - R 80 -6.6 -4.87665 | gap 1, overlap 1195314 GTTCACTCACAAAAA CAACAGGCACC TCACCG GGTGCCTGC-G TCATGACGGAATAAA TERM 1427 1195335 - 1195314 - R 100 -11.6 -4.5448 | overlap 1195311 CACTCACAAAAACAA CAGGCACC TCACCG GGTGCCTG CGTCATGACGGAATA TERM 1428 1195472 - 1195498 + r 91 -2.2 -5.9362 | overlap 1195473 TCTTCATTTGTCTGT CCCCGCAG CTCCGCGATCA CTGCGGGA TTTTTTTATGTTTTA SBO_1199 1196125 - 1195511 - | putative tail component TERM 1429 1195809 - 1195794 - GR 71 -3.2 -4.82901 | gap 1, overlap 1195795 1195797 GTGGTGGCAGAAAAA CCACCGG CTG CCAG-GG CTGAACCCCATAACG SBO_1200 1196907 - 1196089 - | tail assembly protein TERM 1430 1196560 - 1196570 + gr 71 -2.4 -4.96848 | GCAGACCAGCCACCA GGGC AGT GCGC TTTTTATCTGCAGCC SBO_1201 1197541 - 1196843 - | minor tail protein TERM 1431 1197223 - 1197210 - GR 72 -5.9 -4.42653 | overlap 1197220 ACCGCATCCAGAAAA CGGGC ATAC ACCCG GCGGCGGACCACCGT TERM 1432 1197680 - 1197661 - R 100 -10 -4.82901 | CGGTCGCCACAAAAA GGCACGGT AACC ACCATGCC ACGATAAAAACTCTT SBO_1202 1201036 - 1197875 - | putative tail length tape measure protein TERM 1433 1198813 - 1198836 + g 87 -4.4 -5.1861 | overlap 1198814 TCTTCAGGGTCTCTT CCCGGGACCG CAAC TGCTCCCGGA TTTTTTGCTGGTCAA TERM 1434 1199198 - 1199217 + g 71 -2.8 -4.82901 | CCCTTTCAGTCTGGA CAGGGC CAGCTCAC GCTCTG TTTTTGTCAGGGCAC TERM 1435 1201230 - 1201214 - H 100 -12.3 -4.68724 | CCATTGAACAGAAAA GGCAGCA CGT TGCTGCC TGGCGCGCCAGTGGT SBO_1203 1201241 - 1201873 + | hypothetical protein TERM 1436 1201874 - 1201855 - f 70 -2.1 -4.98616 | overlap 1201857 TGAAAACACGAAAAA TACACTG CTAACT CAGTGAA AAATAATGAATATCC TERM 1437 1202236 - 1202222 - g 74 -2.8 -4.93316 | GAAGAAGATGAAAAA GCGT CCCGTTC ACGC CCGATACGCAAACCC TERM 1438 1203080 - 1203066 - g 74 -3.4 -5.00616 | overlap 1203067 1203068 GCCCCGTGGAAAAAA TCCGCC AGT GGCGAC AGCGTTATGCCCGTC SBO_1204 1201880 - 1203481 + | ISSfl3 orfC TERM 1439 1203553 - 1203521 - T 100 -16.3 -3.29511 | TGCACCGGGCCATAA CCTGCAGTCGGGAGT TGA ACTCCTGACGGCAGG AAATGAGCCAGACCA TERM 1440 1203913 - 1203902 - T 90 -7.2 -5.40072 | opp_overlap 1203902 CCGGGCGTAAAAAAA CCGC CTCA GCGG TTCTCATCATTCATG SBO_1205 1204603 - 1204229 - | putative tail assembly chaperone SBO_1206 1205022 - 1204618 - | putative major tail subunit insB 1205527 - 1205024 - | IS1 ORF2 pocR 1205763 - 1206689 + | pdu/cob regulatory protein TERM 1441 1206793 - 1206773 - T 72 -4.7 -4.67641 | ATGGGAAAAGTAAAA TCAGCTCAT AAC ATACGCTGA CAGGTGTGGCACATT SBO_1209 1207915 - 1207094 - | IS911 ORF2 TERM 1442 1207502 - 1207513 + g 77 -5.8 -4.63218 | opp_overlap 1207498 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 1443 1207854 - 1207874 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG cobS 1209534 - 1210277 + | cobalamin synthase cobT 1210343 - 1211368 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase erfK 1211433 - 1212365 + | hypothetical protein TERM 1444 1212415 - 1212386 - f 80 -12.3 -3.02946 | opp_overlap 1212392, overlap 1212392 TTGGTAATTAGAAAG CAAAAAGCCTGCT AGAA AGCAGGCTTTTTT GAATTTGGCTCCTCT TERM 1445 1212392 - 1212409 + F 100 -11.3 -5.22039 | opp_overlap 1212386 1212392 ATTAGAAAGCAAAAA GCCTGCT AGAA AGCAGGC TTTTTTGAATTTGGC TERM 1446 1212409 - 1212392 - f 100 -11.3 -5.05505 | opp_overlap 1212392, overlap 1212386 ATTAGAAAGCAAAAA GCCTGCT AGAA AGCAGGC TTTTTTGAATTTGGC SBO_1217 1213970 - 1214686 + | hypothetical protein TERM 1447 1214728 - 1214694 - T 78 -11.7 -3.00476 | opp_overlap 1214694 1214699 1214703, overlap 1214680 1214699 1214703 ATCTCTAATTATATA TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATCCTT TERM 1448 1214694 - 1214728 + T 84 -13.9 -2.88212 | opp_overlap 1214680 1214694 1214699 1214703, overlap 1214699 1214703 ATCTCTAATTATATA TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATCCTT TERM 1449 1214699 - 1214723 + T 77 -9.4 -3.8766 | opp_overlap 1214680 1214699 1214694 1214703, overlap 1214694 1214703 TAATTATATATTAAA GAAATCTGTC TTTAT GGCAGATTTC TTTAATCTCATATAA TERM 1450 1215079 - 1215051 - T 84 -5.2 -5.4387 | opp_overlap 1215061 ACAGAAATCAAAAAA CCCGGGCACTTT TTTAC AAGGTAACCGGG TAAAAATAATTTTTA TERM 1451 1215080 - 1215094 + T 79 -4.4 -5.19916 | overlap 1215061 TACAAGGTAACCGGG TAAAAA TAA TTTTTA TTTTTTAACTGTTTT SBO_1219 1216076 - 1215318 - | hypothetical protein TERM 1452 1216195 - 1216215 + H 75 -6.2 -4.43681 | TAAGAATATTCAGGC TACCGTTA ATCAG TAGCGGTA TTTTCGTATTCCCTG TERM 1453 1216531 - 1216521 - H 79 -3.2 -5.42862 | ATAGCTGCAAAAAAA GCCA TAA TGAC CATATTGAAGCTGTC SBO_1221 1217187 - 1218449 + | putative P4-type integrase TERM 1454 1218484 - 1218510 + T 100 -13.8 -4.74103 | opp_overlap 1218484 GTTAAAAATGAAAAA GCAGATCCTGAT TGA ATCCGGATCTGC TTTTTACATTAGGCA TERM 1455 1218510 - 1218484 - T 100 -13.8 -5.18355 | opp_overlap 1218484 GTTAAAAATGAAAAA GCAGATCCTGAT TGA ATCCGGATCTGC TTTTTACATTAGGCA TERM 1456 1218865 - 1218852 - T 81 -3.9 -5.28826 | opp_overlap 1218852, overlap 1218841 AAACCGTACAAAAAA TTTCT ACGT AGAAA TTTTTTCGGTGGATA TERM 1457 1218852 - 1218865 + T 77 -3.9 -5.09895 | opp_overlap 1218841 1218852 AAACCGTACAAAAAA TTTCT ACGT AGAAA TTTTTTCGGTGGATA TERM 1458 1218980 - 1218998 + T 72 -3.2 -4.91459 | GAATAACCATGAATT TAATAGTC GAT GATTATTG TTTTTATCAGTATTG TERM 1459 1219056 - 1219025 - T 82 -13.4 -3.00138 | opp_overlap 1219034, overlap 1219022 1219027 1219034 ATTGATAGGAAAGTA TACAAAAAATTTTG GCCC CAAAATTTTTTGTA CGAAAACCGATGAAT TERM 1460 1219054 - 1219027 - T 78 -11.6 -3.05159 | opp_overlap 1219034, overlap 1219025 1219022 1219034 TGATAGGAAAGTATA CAAAAAATTTTG GCCC CAAAATTTTTTG TACGAAAACCGATGA TERM 1461 1219047 - 1219034 - T 81 -3.9 -5.43487 | opp_overlap 1219034, overlap 1219027 1219025 1219022 AAAGTATACAAAAAA TTTTG GCCC CAAAA TTTTTTGTACGAAAA TERM 1462 1219034 - 1219047 + T 77 -3.9 -5.24129 | opp_overlap 1219034 1219027 1219025 1219022 AAAGTATACAAAAAA TTTTG GCCC CAAAA TTTTTTGTACGAAAA TERM 1463 1219118 - 1219102 - T 72 -6.7 -4.26079 | opp_overlap 1219102, overlap 1219105 GGAAACCATCCAAAA TTATTTG GGG CAAATAA TTTTGCCCGAAAACC SBO_1222 1219650 - 1219168 - | putative integrase TERM 1464 1219366 - 1219378 + g 71 -9.1 -3.45592 | overlap 1219364 CCCGAGACGTGACGC CTGGC TGT GCCAG TATTTCATCGCGCTT TERM 1465 1219551 - 1219538 - G 73 -9.5 -3.59087 | AACACCACGGTTAAA CGGGG CTCA CCCCG CTCCAGCGATTGCTT SBO_1223 1220583 - 1219696 - | IS629 ORF2 TERM 1466 1220263 - 1220275 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_1224 1220858 - 1220583 - | IS629 ORF1 SBO_1225 1221349 - 1222062 + | IS600 ORF2 TERM 1467 1222913 - 1222879 - g 100 -14.9 -3.54424 | opp_overlap 1222909 CGCGATTTTCCCAAA TGGCTGGCGGGCAGC CAACC GCCGCCCGCCCGGCA TAATGGACATATCAC TERM 1468 1222909 - 1222941 + G 85 -13.5 -3.17723 | opp_overlap 1222879 1222917, overlap 1222939 CAACCGCCGCCCGCC CGGCATAATGGACAT ATC ACGCCCATTATGCCG TTACGTTAACGCTGA SBO_1226 1222114 - 1222950 + | hypothetical protein SBO_1227 1224346 - 1223258 - | putative transposase TERM 1469 1223403 - 1223421 + g 91 -3 -5.47159 | overlap 1223382 1223379 TCTGTCAATGACGGG GCGGGGTA AAT TTTCCTGC TTTTTTGTATTGCCG yoaE 1226023 - 1224473 - | putative transport protein TERM 1470 1224859 - 1224848 - G 72 -5.8 -4.35483 | GGTCACGATAACAAA GCTC CCGC GAGC ACGACGCAGCACGCC TERM 1471 1226241 - 1226218 - H 72 -8.2 -3.67588 | opp_overlap 1226222 TAAACGGGAGTTAAA CATATCAGAG ACGC CTCTGATTTG GCAAAGATTTACCTT TERM 1472 1226919 - 1226894 - g 100 -12.5 -4.58685 | AAACCGGTTGAAAAA GCCGCGCCAGC ACCC GCTGCCGCAGC ACCAAAAGCGGCTCC manX 1226486 - 1227457 + | PTS enzyme IIAB, mannose-specific manY 1227520 - 1228320 + | PTS enzyme IIC, mannose-specific TERM 1473 1228383 - 1228369 - g 82 -2.8 -5.28778 | opp_overlap 1228370, overlap 1228370 ACCACCGAGAAAAAA CTCACT CAA AGTGAT ATTCGTGGCGTATTC manZ 1228324 - 1229184 + | mannose-specific PTS system protein IID TERM 1474 1229219 - 1229200 - f 71 -10.6 -2.62396 | opp_overlap 1229201 GACTGTCGTACACTA CCGGGGCC TTTT GGCCCCGT TTTTTTATCTGGAGG TERM 1475 1229201 - 1229218 + F 100 -14.1 -5.71712 | opp_overlap 1229200 ACTGTCGTACACTAC CGGGGCC TTTT GGCCCCG TTTTTTTATCTGGAG SBO_1232 1229239 - 1229715 + | hypothetical protein insB 1229938 - 1230441 + | IS1 ORF2 TERM 1476 1230485 - 1230536 + T 73 -9.8 -3.42364 | gap 1, opp_overlap 1230483 1230487, overlap 1230483 AATAACTTATGAATT TAGCCAAAGCTATGTTTAGTGTATT TTT AATA-ATCAGACATAGCTTAGGCTA TATTATCTCTTCCCT TERM 1477 1231199 - 1231215 + T 77 -9.3 -3.93963 | opp_overlap 1231198 1231196 1231199 GATGAAGATGAAGAG CCGCGCC GTC GGCACGG TTTCTGGCTACTGGT TERM 1478 1231215 - 1231199 - T 73 -11.5 -2.55437 | opp_overlap 1231199, overlap 1231198 1231196 GATGAAGATGAAGAG CCGCGCC GTC GGCACGG TTTCTGGCTACTGGT rrmA 1232277 - 1231468 - | 23S rRNA methyltransferase A TERM 1479 1232376 - 1232394 + r 71 -7.4 -3.86822 | opp_overlap 1232376 AAAGCATAGTAAAAA GCCTCG CATTCGA CGAGGC TTTATAGCGAGATTG TERM 1480 1232394 - 1232376 - R 88 -8.1 -4.85177 | opp_overlap 1232376 AAAGCATAGTAAAAA GCCTCGC ATTCG ACGAGGC TTTATAGCGAGATTG TERM 1481 1232466 - 1232450 - R 70 -9.5 -2.94747 | opp_overlap 1232441 GGATTCGATCAGATA GCTGTTA CGT TAACAGC TGCCGGACCTTTCTG cspC 1232652 - 1232443 - | cold shock-like protein CspC SBO_1237 1232808 - 1232665 - | hypothetical protein TERM 1482 1233464 - 1233433 - R 71 -9.6 -3.25729 | gap 1, opp_overlap 1233440 TATAATCAGGATGAA TTGAGTAAC-CCTTC AAC GACGGGGTTACTCAA GATTGAGGAAGGATT SBO_1238 1233765 - 1233478 - | hypothetical protein SBO_1239 1233983 - 1233840 - | hypothetical protein TERM 1483 1234514 - 1234484 - R 77 -6.9 -4.44046 | opp_overlap 1234484 1234487 CTCATGCTAAATAAA GAACCTGTCTG TTTGATATT CCGACAGGTTC TTACTCTCATCAGAA SBO_1240 1235315 - 1234524 - | putative regulator SBO_1241 1235399 - 1236865 + | putative transport protein TERM 1484 1236889 - 1236918 + T 89 -9.3 -4.59109 | opp_overlap 1236890 1236891, overlap 1236891 CGTCGATCAGGACTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1485 1236917 - 1236890 - T 81 -12.8 -3.23216 | opp_overlap 1236889 1236891, overlap 1236891 GTCGATCAGGACTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 1486 1236891 - 1236916 + T 100 -16.3 -3.90762 | opp_overlap 1236890 1236891, overlap 1236889 TCGATCAGGACTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 1487 1236916 - 1236891 - T 90 -16.3 -2.53715 | opp_overlap 1236891 1236889, overlap 1236890 TCGATCAGGACTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_1242 1237538 - 1236900 - | IS4 orf SBO_1243 1238247 - 1237657 - | IS4 orf TERM 1488 1238237 - 1238262 + g 73 -9.1 -3.61398 | opp_overlap 1238237 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 1489 1238262 - 1238237 - G 100 -9.8 -5.61596 | opp_overlap 1238237 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC htpX 1239232 - 1238351 - | heat shock protein HtpX TERM 1490 1239272 - 1239262 - R 80 -6.8 -4.65916 | opp_overlap 1239269, overlap 1239264 1239269 1239270 CTCAGTTTAACAAAA CGCA ATA TGCG ATACCCACATCGTAT TERM 1491 1239394 - 1239417 + r 90 -14 -3.42147 | opp_overlap 1239394 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC TERM 1492 1239417 - 1239394 - R 100 -14 -5.00616 | opp_overlap 1239394 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC prc 1241472 - 1239424 - | carboxy-terminal protease TERM 1493 1239896 - 1239906 + g 72 -8.2 -3.77219 | GGCATGATGATGTCT GGCG TTA CGCC TTTACGTTGCGTACT TERM 1494 1241047 - 1241065 + g 74 -8.1 -4.13767 | GTTATAAGTGTCGTT GCCGGTG AAATC CATCGGC TTTTCCAGTACCGAC TERM 1495 1241120 - 1241105 - G 77 -8.2 -4.14392 | opp_overlap 1241105 1241104, overlap 1241106 TGGTAACGCTCAAAA CGGCGC TTTT GCGCCA GATTGTAGAGATCGT proQ 1242190 - 1241492 - | putative solute/DNA competence effector TERM 1496 1241782 - 1241794 + g 70 -6.9 -4.06419 | overlap 1241747 GTGGCTTGCGTTCGC GGCGC GGT GCGTC TTCTTTCTCACCAGC SBO_1247 1242838 - 1242287 - | hypothetical protein TERM 1497 1242856 - 1242832 - G 72 -6.6 -4.26903 | opp_overlap 1242835 GCCAGCCTATTAAAA TAAGCATTAA ATGCG TTAATGCTCA AGATCATTCCCATCA TERM 1498 1243102 - 1243086 - gH 70 -3.6 -4.65895 | opp_overlap 1243086, overlap 1243087 GCTGTCAGGCAAAAA TTCGCG ACGGG CGCGAC TGGTCGCTAACGCGC TERM 1499 1243153 - 1243175 + GH 71 -9.8 -3.14125 | overlap 1243151 CATGCTGTTGCTGAT GCCGTTTGCC TGG GGCGAACCGC TGTTGCATATCTGGC TERM 1500 1243999 - 1244017 + GH 79 -8.8 -4.08111 | overlap 1244001 GACCTGGATTGGACG CTGGTCGA TGC TCGACCTG TTTGTCATATCTTTA TERM 1501 1244001 - 1244015 + GH 77 -10 -3.61777 | overlap 1243999 CCTGGATTGGACGCT GGTCGA TGC TCGACC TGTTTGTCATATCTT SBO_1248 1242914 - 1244197 + | hypothetical protein TERM 1502 1246755 - 1246734 - gf 72 -8.1 -3.78329 | gap 1, opp_overlap 1246724, overlap 1246737 GCCCAGGAAGGCAAA CAC-TTCCTG TTG CAGGAAAGTG AACCGAAAGAGTGGC SBO_1249 1244160 - 1246799 + | hypothetical protein TERM 1503 1246807 - 1246832 + F 100 -14.7 -3.9712 | opp_overlap 1246801, overlap 1246808 CCAAATAATGCCCAC TGCTCCGGCGT GCCT GCGCCGGAGCG TTTATGCTAAACTGC TERM 1504 1246808 - 1246831 + F 93 -16 -2.97951 | opp_overlap 1246801, overlap 1246807 CAAATAATGCCCACT GCTCCGGCGT GCCT GCGCCGGAGC GTTTATGCTAAACTG TERM 1505 1246951 - 1246961 + G 70 -4 -4.63932 | ATGCCTTCGACGCTC TCAT TTG ATGA TTTTCTTGCCGCCTG TERM 1506 1247524 - 1247514 - g 86 -6.8 -5.02074 | CGATGCGCTAAAAAA CTGG TCA CCAG AAAGCAATCAGGAAA yebU 1246873 - 1248318 + | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 1507 1248450 - 1248461 + G 70 -7.2 -4.13767 | GATGAAAACCAGTGT GCGC ATAG GCGC TTTTGAAATCGACGA SBO_1251 1248421 - 1248672 + | hypothetical protein TERM 1508 1248700 - 1248684 - f 70 -5 -4.44608 | opp_overlap 1248684, overlap 1248681 CTGATCCAAAAAGAA CCCGTC GGCAT GGCGGG TTATTTGTCCTGGTT TERM 1509 1248684 - 1248700 + F 73 -7.9 -4.12857 | opp_overlap 1248684 1248681 CTGATCCAAAAAGAA CCCGTCG GCA TGGCGGG TTATTTGTCCTGGTT TERM 1510 1248890 - 1248901 + G 72 -7.2 -4.21933 | opp_overlap 1248889 GAGCGATCAACGGAT CCGC CAGG GCGG TTGTTTTCCGATTGA SBO_1252 1248693 - 1248968 + | hypothetical protein pphA 1249628 - 1248969 - | serine/threonine protein phosphatase 1 TERM 1511 1250055 - 1250087 + r 87 -10.6 -4.08919 | ACATCCATCAGCCAG CCGTGGCACGTTCT TGCAT ACGACGTGCTACGG TTTCCTTTACGATTT SBO_1254 1250975 - 1250157 - | IS600 ORF2 SBO_1255 1251313 - 1251011 - | IS600 ORF1 ipaH_4 1251634 - 1253349 + | invasion plasmid antigen TERM 1512 1253414 - 1253391 - f 93 -10.2 -4.58395 | opp_overlap 1253403 1253404, overlap 1253393 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 1513 1253412 - 1253393 - f 100 -15 -3.90762 | opp_overlap 1253403 1253404, overlap 1253391 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT SBO_1257 1253707 - 1253994 + | IS600 ORF1 SBO_1258 1254044 - 1254862 + | IS600 ORF2 SBO_1259 1255391 - 1255729 + | ISSfl4 ORF1 SBO_1260 1256659 - 1255769 - | IS629 ORF2 TERM 1514 1256336 - 1256348 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_1261 1256982 - 1256656 - | IS629 ORF1 SBO_1262 1257063 - 1257413 + | putative protein encoded within IS TERM 1515 1257448 - 1257417 - f 72 -5.2 -4.60255 | gap 1, overlap 1257418 1257419 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 1516 1257447 - 1257419 - f 71 -10.3 -2.60776 | overlap 1257417 1257418 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_1263 1257633 - 1257971 + | putative protein encoded within IS SBO_1264 1258041 - 1258457 + | putative protein encoded within IS SBO_1265 1258470 - 1259036 + | putative protein encoded within IS TERM 1517 1259065 - 1259034 - f 76 -7.5 -4.258 | gap 2 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CACACGGTTTTACGT insB 1259056 - 1259532 + | IS1 ORF2 SBO_1267 1260449 - 1259631 - | IS600 ORF2 SBO_1268 1260786 - 1260499 - | IS600 ORF1 SBO_1269 1261607 - 1260843 - | hypothetical protein TERM 1518 1261728 - 1261702 - R 95 -13 -3.88583 | overlap 1261703 GAAAGCGGGTATAAA TTCGCCCATCCG TTG CAGATGGGCGAG TAAGAAGTATTAGTC TERM 1519 1261727 - 1261703 - R 100 -16.5 -2.92668 | overlap 1261702 AAAGCGGGTATAAAT TCGCCCATCCG TTG CAGATGGGCGA GTAAGAAGTATTAGT sdaA 1263102 - 1261738 - | L-serine deaminase yeaB 1263864 - 1263286 - | hypothetical protein pabB 1265229 - 1263868 - | p-aminobenzoate synthetase, component I TERM 1520 1264159 - 1264148 - G 72 -5.8 -4.3129 | opp_overlap 1264148, overlap 1264149 GAGCCACCAGGAAAA GCTG CGCG CAGC AGATCGCTGGCGTGT TERM 1521 1264464 - 1264453 - G 70 -3.6 -4.63952 | ATCACAAAGAATAAA CCGC TCTG GCGA AAGGCTTAAAATTGC TERM 1522 1264515 - 1264502 - G 83 -5.2 -5.1615 | TCAAGACGTAAAAAA GCGC TAAATG GCGC GCGGTTGGCCTGATT TERM 1523 1265123 - 1265095 - G 72 -8.1 -3.98159 | overlap 1265096 GACCACAATATCAAA GCGGCTATACGGA TGA TCGGCATAGCCGG AGTGTAAAAGCATCG TERM 1524 1265122 - 1265096 - G 75 -11.6 -2.98173 | overlap 1265095 ACCACAATATCAAAG CGGCTATACGGA TGA TCGGCATAGCCG GAGTGTAAAAGCATC SBO_1273 1265303 - 1265482 + | hypothetical protein insB 1266041 - 1265538 - | IS1 ORF2 SBO_1275 1266116 - 1266298 + | putative IS1 encoded protein TERM 1525 1266349 - 1266319 - T 100 -11.3 -4.8543 | TAATTGTGAGAAAAA GGACGCTTTTTAT ATGTG ATTAAAAGCGTCC TGACCCATTTATGCT SBO_1276 1266738 - 1266379 - | hypothetical protein SBO_1277 1267132 - 1266878 - | putative IS1 encoded protein insB 1267207 - 1267710 + | IS1 ORF2 TERM 1526 1267805 - 1267831 + T 71 -9.5 -3.254 | overlap 1267804 GTAATATCTTAATCT CTGGTCGATTT ATGTA AAACCGACCAG TATTATCGATAAATG SBO_1279 1268269 - 1267877 - | hypothetical protein TERM 1527 1269174 - 1269194 + G 72 -6.1 -4.3467 | AAAGTGCGCTGATCG TCTTGCCCA GAG TGCGCAGGA TTTTCGTCTGCAACT TERM 1528 1269741 - 1269752 + G 72 -4.4 -4.64846 | opp_overlap 1269741 GATCATCGAAGCTAA CAAC GGTC GTTG TTTTATGCTTTGTAC SBO_1280 1268353 - 1270263 + | putative enzyme yeaZ 1270321 - 1271016 + | hypothetical protein SBO_1282 1271056 - 1271637 + | putative outer membrane protein TERM 1529 1271683 - 1271659 - f 100 -14.4 -5.27335 | opp_overlap 1271659 1271663, overlap 1271639 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCTTACGGTA TERM 1530 1271659 - 1271683 + F 86 -14.4 -2.66106 | opp_overlap 1271639 1271659, overlap 1271663 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCTTACGGTA TERM 1531 1271663 - 1271679 + F 79 -9.4 -4.02253 | opp_overlap 1271639 1271659, overlap 1271659 TTAAAGAAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCTTAC TERM 1532 1272797 - 1272809 + G 72 -7.7 -3.91144 | opp_overlap 1272796 1272793, overlap 1272800 1272801 TGAACAATAAAGAGT TCCAG CAG CTGGA TTTCTCCAGTCTGCA TERM 1533 1273374 - 1273385 + G 70 -4.4 -4.57569 | opp_overlap 1273374 ATCGCTTACCGAAGA GTCA CTGG TGAC TTTTTGCCGCCGTCA fadD 1271842 - 1273527 + | long-chain-fatty-acid--CoA ligase TERM 1534 1273548 - 1273564 + F 100 -10.8 -5.40072 | opp_overlap 1273539, overlap 1273537 AAGTCAGTCGTCAGA CGCCGG TTAAT CCGGCG TTTTTTTGACGCCCA rnd 1273596 - 1274723 + | ribonuclease D TERM 1535 1274776 - 1274726 - T 95 -12.5 -4.26344 | opp_overlap 1274735 ATATCCGCAGTAAAA TCTTCCGAAGCCGGACTGGGCGC GCTCA GCGCCACATCCGGCTTTGGCAAA CTACAAATCCAACAC TERM 1536 1274735 - 1274767 + T 86 -12.1 -3.54424 | opp_overlap 1274726 GTAAAATCTTCCGAA GCCGGACTG-GGCGC GCTCA GCGCCACA-TCCGGC TTTGGCAAACTACAA yeaX 1275742 - 1274777 - | putative diogenase beta subunit TERM 1537 1275498 - 1275488 - G 88 -8.2 -4.65895 | opp_overlap 1275495 1275495 CTGCTGATGCAAAAA GCGG GAA CCGC CGCGCGAGTTTTCCT yeaW 1276922 - 1275798 - | hypothetical protein yeaV 1278399 - 1276954 - | putative transporter TERM 1538 1278449 - 1278465 + r 79 -10.1 -3.78934 | AAAGTGTATATTGCG TTGGCCG CGT CGGCCGA TTGTTGTGGGAAAAG TERM 1539 1278792 - 1278776 - R 100 -13.7 -5.57396 | overlap 1278739 AGAACGAATAAAAAA CCGCGTC AGT GACGCGG TTCAAATAAACTGGT yeaU 1279899 - 1278814 - | putative tartrate dehydrogenase TERM 1540 1280004 - 1279994 - g 71 -3.2 -4.78848 | TGGTGAAACATAAAA CACG AAT CATG AATAATTTACCGCTG yeaT 1279981 - 1280925 + | putative transcriptional regulator LYSR-type TERM 1541 1280952 - 1280967 + T 74 -5.4 -4.64846 | ATTATCGGGTTGATA TCGGGT TAAA ACCTGA TTTTCTCCTTTCTAA TERM 1542 1281103 - 1281132 + T 89 -9.3 -4.59109 | overlap 1281105 TATCTGGTTGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1543 1281105 - 1281130 + T 100 -16.3 -3.90762 | overlap 1281103 TCTGGTTGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_1290 1281752 - 1281114 - | IS4 orf SBO_1291 1282461 - 1281871 - | IS4 orf TERM 1544 1282451 - 1282476 + g 73 -9.1 -3.61398 | opp_overlap 1282451 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 1545 1282476 - 1282451 - G 100 -9.8 -5.61596 | opp_overlap 1282451 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1546 1282531 - 1282542 + H 76 -2.2 -5.29716 | TGATCGGCATTAATC TGGT TGGG GCCA TTTTTATTGTGTTGG TERM 1547 1282817 - 1282836 + G 72 -5.7 -4.56775 | gap 1, overlap 1282820 CGAGGCCAAATCCGA TGAGCCCC AATAC GGGGC-CA TTTTTAAACGCGCGT yeaS 1282554 - 1282928 + | hypothetical protein insB 1283151 - 1283654 + | IS1 ORF2 SBO_1294 1283670 - 1283906 + | hypothetical protein yeaR 1284215 - 1284439 + | hypothetical protein yoaG 1284443 - 1284625 + | hypothetical protein yeaQ 1284773 - 1285021 + | hypothetical protein TERM 1548 1285033 - 1285063 + T 78 -4.8 -5.03314 | gap 1, opp_overlap 1285039, overlap 1285034 1285035 1285039 TTAACGCTTAAATTG CA-CAAAGGCTGC ACACAG GCAGCCTTTGCTA TTTTTTAGAGGTGAC TERM 1549 1285034 - 1285061 + T 83 -9.9 -4.14633 | opp_overlap 1285039, overlap 1285033 1285035 1285039 TAACGCTTAAATTGC ACAAAGGCTGC ACACAG GCAGCCTTTGC TATTTTTTAGAGGTG TERM 1550 1285035 - 1285060 + T 82 -13.4 -3.08056 | opp_overlap 1285039, overlap 1285034 1285033 1285039 AACGCTTAAATTGCA CAAAGGCTGC ACACAG GCAGCCTTTG CTATTTTTTAGAGGT TERM 1551 1285056 - 1285039 - T 74 -8.4 -3.95219 | opp_overlap 1285035 1285034 1285033 1285039 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG TERM 1552 1285039 - 1285056 + T 76 -8.4 -4.18668 | opp_overlap 1285039, overlap 1285035 1285034 1285033 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG insB 1285771 - 1285268 - | IS1 ORF2 SBO_1299 1285846 - 1286082 + | putative IS1 encoded protein yoaF 1286159 - 1286413 + | hypothetical protein yeaO 1286803 - 1286435 - | hypothetical protein TERM 1553 1286462 - 1286486 + g 86 -6.5 -5.1675 | gap 1 TAGCCAGTCGGCCAG CACCAGCGCA TGGTTC TGCG-TGGTG TTTTTTGCTGCGTAG yeaN 1288018 - 1286822 - | putative amino acid/amine transport protein TERM 1554 1288304 - 1288316 + G 73 -9.1 -3.64703 | TTGTGGATGGTGCCG CCGCA ATA TGCGG TTTGGATACCGGGCG TERM 1555 1288874 - 1288853 - g 93 -11.5 -4.1711 | opp_overlap 1288851, overlap 1288828 1288827 ACTATGTTTAAGAAA GGCCTGGGG CAAA CGCCAGGCC GATATATTGCGGGAT yeaM 1288115 - 1288936 + | putative ARAC-type regulatory protein yeaL 1289339 - 1288893 - | hypothetical protein SBO_1305 1289460 - 1289612 + | hypothetical protein yeaK 1290116 - 1289613 - | hypothetical protein TERM 1556 1290005 - 1289980 - G 78 -10.5 -3.53012 | gap 1, opp_overlap 1289975 GCTCCCTGGCCTAAA GCGGTGCCACGA ATT TC-TGACACCGC TTCACATTTACCTAC TERM 1557 1290697 - 1290680 - R 71 -9.9 -3.20573 | opp_overlap 1290660, overlap 1290678 CGATCGATACCAATA CTTCCTG ACTG CAGGAAG GACCAGTTATTCATC TERM 1558 1291405 - 1291387 - R 79 -8.1 -4.20106 | AAATTGTATGCAAAA GCCACGC AAAAA GCATGGC TCTGAATATTTTTGC yeaI 1292898 - 1291423 - | hypothetical protein TERM 1559 1291459 - 1291479 + g 74 -7.5 -4.13872 | TTTGTTGCCCCCCTC GCTTTTCGC TTC GCGTAAGGC TTTATCTGCTTCCGT TERM 1560 1292160 - 1292149 - G 71 -2.2 -4.94672 | AAAGAACAGTAAAAA TGCC CACA GACA AACCAATATTTTTGT TERM 1561 1292308 - 1292318 + g 100 -2.4 -5.97979 | opp_overlap 1292308 AATCAACGCCAGCAA CAGG ATT CCCG TTTTTTTCTTATTGT TERM 1562 1293013 - 1293039 + r 71 -9.5 -3.19995 | gap 1, opp_overlap 1293005 1293013, overlap 1293011 1293010 1293006 ACAGTAAGCTAAAAA TCAGCCAGG-CG ATAA TGACCTGGCTGA TAGTTTTAGTCTTTA TERM 1563 1293039 - 1293013 - R 100 -11.6 -4.76892 | opp_overlap 1293013 1293011 1293010 1293006, overlap 1293005 ACAGTAAGCTAAAAA TCAGCCAGGCGA TAA TGACCTGGCTGA TAGTTTTAGTCTTTA yeaH 1294328 - 1293045 - | hypothetical protein yeaG 1296375 - 1294441 - | hypothetical protein TERM 1564 1294551 - 1294562 + g 70 -5.8 -4.19238 | CGTGTTTCTTCTGCT CGTC GGTT GACG TTTTGGCGTTAAACG TERM 1565 1295412 - 1295425 + g 72 -4.5 -4.72127 | CGATGTAAACACGGT CGAGG AAGG CTTCG TTGTTTTTGTTATTA yeaF 1296811 - 1297557 + | hypothetical protein TERM 1566 1297609 - 1297593 - f 100 -13.7 -4.82901 | opp_overlap 1297593 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG TERM 1567 1297593 - 1297609 + F 100 -13.7 -4.2803 | opp_overlap 1297593 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG SBO_1312 1297647 - 1298501 + | putative aldehyde reductase yeaD 1299457 - 1298552 - | hypothetical protein TERM 1568 1299567 - 1299542 - H 72 -9.1 -3.61398 | opp_overlap 1299542 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 1569 1299542 - 1299567 + H 100 -9.8 -5.61596 | opp_overlap 1299542 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SBO_1314 1299557 - 1300147 + | IS4 orf SBO_1315 1300266 - 1300862 + | IS4 orf TERM 1570 1300915 - 1300886 - T 89 -9.3 -4.59109 | overlap 1300888 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACGACCGAAGTCGC TERM 1571 1300913 - 1300888 - T 100 -16.3 -3.90762 | overlap 1300886 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACGACCGAAGTC gapA 1301954 - 1300959 - | glyceraldehyde-3-phosphate dehydrogenase A TERM 1572 1302026 - 1302010 - H 72 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT yeaA 1302296 - 1302709 + | methionine sulfoxide reductase B SBO_1318 1302706 - 1303023 + | hypothetical protein ydjB 1303825 - 1303184 - | nicotinamidase/pyrazinamidase ansA 1304852 - 1303836 - | cytoplasmic asparaginase I TERM 1573 1304073 - 1304099 + g 73 -3.7 -4.77173 | overlap 1304075 AATACCGCGATCGCT GGCTTCTTGTA ATTCC TGCAGGAAGGC TTTGTTTTGTGGCGC TERM 1574 1305009 - 1304980 - R 100 -9.4 -5.08824 | gap 1, overlap 1304983 1304984 CGTCGAGGTAAAAAA TAATGTGGCCGAC GATCT GTCGGCCAC-TCA GTACAAGACTTAACG TERM 1575 1305007 - 1304983 - R 95 -11.4 -4.64763 | overlap 1304980 1304984 CGAGGTAAAAAATAA TGTGGCCGAC GATCT GTCGGCCACT CAGTACAAGACTTAA TERM 1576 1305006 - 1304984 - R 93 -14.9 -3.37773 | overlap 1304983 1304980 GAGGTAAAAAATAAT GTGGCCGAC GATCT GTCGGCCAC TCAGTACAAGACTTA sppA 1306875 - 1305019 - | protease 4 TERM 1577 1306865 - 1306846 - G 77 -2.8 -5.08824 | overlap 1306848 CGTCCATTTAAAAAA TCCGGCAA TAAA TCGCCAAA GGGTTCGCATGTATT ydjA 1307036 - 1307587 + | hypothetical protein selD 1307704 - 1308747 + | selenophosphate synthetase TERM 1578 1309175 - 1309126 - g 77 -8.5 -4.13945 | gap 1, opp_overlap 1309132 1309171 1309173, overlap 1309127 ACTGGCACCGGAAAA GCGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCGG TTGAGCGGGCGATCG TERM 1579 1309174 - 1309127 - g 75 -12 -3.08046 | gap 1, opp_overlap 1309132 1309171 1309173, overlap 1309126 CTGGCACCGGAAAAG CGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCG GTTGAGCGGGCGATC topB 1308752 - 1310713 + | DNA topoisomerase III TERM 1580 1310754 - 1310784 + G 100 -9.2 -5.47821 | opp_overlap 1310754 AGTCATATTCTGAAA TATCCAGCGAAT CAAGAAA ATTCGTTGGATA TTTTTTTGCATGGAT TERM 1581 1310863 - 1310849 - g 79 -3.6 -5.16237 | AATGTGATGAAAAAA GTTTTA TTA CAAAAC CATCCTGGGAGCGAG SBO_1325 1310729 - 1311301 + | hypothetical protein insB 1311815 - 1311312 - | IS1 ORF2 SBO_1327 1311908 - 1312216 + | putative IS1 encoded protein gdhA 1313676 - 1312333 - | glutamate dehydrogenase TERM 1582 1313601 - 1313629 + g 70 -6.7 -4.12902 | gap 1 CTTCACGAACGGCTT GCGCGAACTCGG TTTGAT TCGGGT-CGCGC TTTTGGACATGGTTG TERM 1583 1314036 - 1314059 + G 93 -12.4 -3.87815 | overlap 1314026 CAGGCGGGCAGTCAG CGCAGCCCTG TACT CAGTGCTGCG TTTATCAGGATCAAA SBO_1329 1313912 - 1314184 + | hypothetical protein SBO_1330 1314557 - 1314150 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase TERM 1584 1314798 - 1314815 + G 75 -5.5 -4.63218 | CGCTGGGCTGGTATC TGGCGGC GCTA GTCGTCA TTTTGTTGAACAGGC TERM 1585 1315226 - 1315252 + G 95 -15.2 -2.75803 | GTGTGGAGTGGGTAT CTGACGCTGAAG TCG CTCCAGCGTCAG TAATTGCAATGTTAT SBO_1331 1314638 - 1315255 + | putative cytochrome oxidase SBO_1332 1316586 - 1315264 - | putative thiosulfate sulfur transferase TERM 1586 1315291 - 1315306 + g 81 -4.6 -5.09895 | overlap 1315292 GTCCGGGCCGCGTTC ACCGGT TGCT ACCGGA TTTTTTGGATCGCTG TERM 1587 1315905 - 1315920 + g 70 -6.8 -4.08767 | opp_overlap 1315893 1315896 GAATGACCGTGGTGT CATGGC GAAT GCCGTG TTTTGCCAGCATCGC TERM 1588 1316137 - 1316157 + g 75 -4.5 -4.82901 | opp_overlap 1316139, overlap 1316139 CCATTGCGGATAAAC CAGCTGCTC AAA GTGCGGCAG TTTTTGTAGACGGGA SBO_1333 1317291 - 1316638 - | putative ATP-binding component of a transport system TERM 1589 1318105 - 1318116 + r 74 -7.2 -4.22748 | CATCAGCAGCAGACT GGCG AGTG CGCC TTTCGTTTGTTGATC TERM 1590 1318339 - 1318353 + r 74 -5.6 -4.67353 | opp_overlap 1318338, overlap 1318341 ATCCAGCACAATGAC CTGCTG CAA CAGCCG TTTTTCGCTCAATAC SBO_1335 1319966 - 1318800 - | hypothetical protein TERM 1591 1318917 - 1318931 + g 81 -7.1 -4.59773 | TTGCAATATTTCGCG CTGCC CGTCA GGCAG TTTTTGCGGATCGAG TERM 1592 1319128 - 1319140 + g 95 -9.1 -5.14965 | opp_overlap 1319128, overlap 1319119 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1593 1319140 - 1319128 - G 71 -9.1 -3.53012 | opp_overlap 1319119 1319128 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1594 1319607 - 1319560 - G 72 -4.9 -4.65895 | gap 2, opp_overlap 1319595 GTCGGCACTGAAAAA TCTTCCCGCACCGGCAGCTGTGT GTCG ACATAGC-GCCAGTT-GGGCAGA GTCTCCGCCCAGCCC ynjA 1320524 - 1319976 - | hypothetical protein ydjZ 1321231 - 1320524 - | hypothetical protein TERM 1595 1320910 - 1320893 - G 88 -5.5 -5.24129 | gap 1, overlap 1320896 1320898 TCTGGCGATAAAAAA GCACAGCG CCG CGCCG-GC CATCGAACTGGTCCA TERM 1596 1321157 - 1321127 - G 86 -11.1 -3.91897 | overlap 1321147 GCTGCGATTGATAAA CTCATGGACGCCG GGAAG CAGCGCCCATGCG AGCAGCATAGCGAAC ydjY 1321986 - 1321405 - | hypothetical protein insB 1322592 - 1322089 - | IS1 ORF2 ydjX 1323463 - 1322837 - | hypothetical protein xthA 1324388 - 1323582 - | exonuclease III TERM 1597 1324166 - 1324152 - G 73 -9.2 -3.57144 | opp_overlap 1324155 1324157 GTCGTCACCGGGAAA GCCGCG ACG CACGGC AATCGGCGTCTCTTT TERM 1598 1324530 - 1324548 + H 74 -11 -2.92792 | overlap 1324527 CGCTTTTGGTGCGCG CTGCGTCA GAA TGGCGCAG TAATTTCCAGTAAAT cstC 1324834 - 1326054 + | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 1599 1326407 - 1326425 + G 79 -10.2 -3.85698 | opp_overlap 1326400 CGATCACACCGGCAG CAGCGAGC TGT GCACGCTG TTTCTCGACCCGGAC TERM 1600 1326762 - 1326745 - g 77 -9.8 -3.5944 | AGGTACATCCGCAAA CCGCGC CTGCCC GCGCGG TGCTGGAGAAAGAAG TERM 1601 1326951 - 1326988 + G 70 -6.1 -4.19735 | gap 1, opp_overlap 1326942 AATTATCACCATTTC CGCGTGG-TGCTGGCGCG TAC CGATCCGGCAACCGAGCG TTTGATTTTAACCGC SBO_1343 1326051 - 1327085 + | arginine succinyltransferase TERM 1602 1327475 - 1327501 + G 100 -14.4 -3.56821 | opp_overlap 1327449 GCGGCGAGCCTGCGA CATCGCCCGCAC GGC GTGCTGGCGGTG TTTGGGCCGTATAAT astD 1327082 - 1328560 + | succinylglutamic semialdehyde dehydrogenase TERM 1603 1329289 - 1329270 - g 72 -7 -4.25104 | opp_overlap 1329270 1329270 TTTCGCCCAGCAAAA CCCGGACG TTAT CGACCAGG GTGTTTTTCATAATG TERM 1604 1329705 - 1329685 - g 70 -6.8 -4.06864 | TTGACAGAAGAAGAA CGCCGG GCGGTGAAT CCGGCG GTGATGATGAACGAT SBO_1345 1328557 - 1329900 + | succinylarginine dihydrolase TERM 1605 1329945 - 1329932 - g 81 -4.5 -5.055 | opp_overlap 1329921, overlap 1329933 TTAACGGGTAAAAAA CCGGT TATC ACCGA GCGAGAAATCAACGG ydjS 1329893 - 1330861 + | succinylglutamate desuccinylase TERM 1606 1330903 - 1330854 - f 74 -3.5 -5.03145 | opp_overlap 1330857 1330866, overlap 1330857 1330862 1330864 1330865 TAATGCTCGAAAAAA TAAGCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGCTTT CTTATAAATTAATAC TERM 1607 1330900 - 1330857 - f 72 -5.2 -4.61482 | opp_overlap 1330857 1330866, overlap 1330854 1330862 1330864 1330865 TGCTCGAAAAAATAA GCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGC TTTCTTATAAATTAA TERM 1608 1330892 - 1330865 - f 78 -12.8 -2.53642 | opp_overlap 1330857 1330866, overlap 1330864 1330862 1330857 1330854 AAAATAAGCTAATAC TTACCCGCAGAA ATCA TTCTGCGGGTAT TAAGTTGCTTTCTTA TERM 1609 1330866 - 1330891 + F 100 -16.3 -3.2827 | opp_overlap 1330865 1330864 1330862 1330857 1330854, overlap 1330857 AAATAAGCTAATACT TACCCGCAGAA ATCA TTCTGCGGGTA TTAAGTTGCTTTCTT spy 1331191 - 1331661 + | periplasmic protein TERM 1610 1331737 - 1331683 - f 86 -12.1 -3.52779 | opp_overlap 1331685, overlap 1331685 AGCCAAAAAACTTAA GACCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGGTT TTCTTTTCTCTTCTC TERM 1611 1331735 - 1331685 - f 93 -14.7 -3.3244 | opp_overlap 1331685, overlap 1331683 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC TERM 1612 1331685 - 1331735 + F 100 -19.8 -5.26907 | opp_overlap 1331685 1331683 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTTG CAG TAATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC SBO_1348 1331801 - 1332439 + | hypothetical protein SBO_1349 1333286 - 1332399 - | nucleotide excision repair endonuclease TERM 1613 1332946 - 1332962 + g 70 -6.5 -4.15044 | AGGGCACAGAGCTGA CGATTGC GGC GCAACCG TTTATTAAACAGCGG TERM 1614 1333444 - 1333485 + r 84 -8.7 -4.57569 | opp_overlap 1333450 1333451, overlap 1333447 1333451 ATAGTTTTATAGGTC GAATAAGGCGTTCACGCCG CATC CGGCGTGAACAAATTACTC TTTTTCGCACAATCC TERM 1615 1333478 - 1333451 - R 77 -12 -2.78371 | opp_overlap 1333447 1333444 1333451, overlap 1333450 TATAGGTCGAATAAG GCGTTCACGCCG CATC CGGCGTGAACAA ATTACTCTTTTTCGC nadE 1334343 - 1333516 - | NAD synthetase TERM 1616 1334305 - 1334317 + g 72 -4.7 -4.69324 | overlap 1334306 ATTAATCTGCGGTTT TGCGC CCA GCGCC TTTATTATTTGTTGT osmE 1334545 - 1334883 + | DNA-binding transcriptional activator OsmE TERM 1617 1334933 - 1334918 - f 71 -7.5 -3.8646 | opp_overlap 1334918, overlap 1334909 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTGGCCTGAG TERM 1618 1334918 - 1334933 + F 95 -7.5 -5.44119 | opp_overlap 1334909 1334918 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTGGCCTGAG celA 1335181 - 1335501 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB insB 1336028 - 1335525 - | IS1 ORF2 SBO_1354 1336121 - 1336294 + | putative IS1 encoded protein SBO_1356 1336613 - 1336888 + | IS629 ORF1 TERM 1619 1337208 - 1337196 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_1357 1336888 - 1337775 + | IS629 ORF2 SBO_1359 1338916 - 1338659 - | putative IS1 encoded protein insB 1338992 - 1339495 + | IS1 ORF2 TERM 1620 1339614 - 1339584 - T 74 -6.8 -4.33653 | CATTTAAAAAGTAAA GCAACGGCCCCTAT ACA AAACGGACCATTGC CAGCATAAGAATTAA SBO_1361 1341017 - 1339626 - | kinase fragment TERM 1621 1340458 - 1340444 - G 70 -3.6 -4.59853 | GGAATGCGGCAAAAA TTACCA CGC TGATAA TTGACGTCGGATTGG SBO_1362 1341740 - 1341150 - | hypothetical protein TERM 1622 1341732 - 1341717 - G 73 -4 -4.74767 | gap 1, overlap 1341719 ACAAGCAATAGAAAA GAGAAGG TGA CCTTC-C GCCGTCATGATAAAA TERM 1623 1341731 - 1341719 - G 72 -7.7 -3.97283 | overlap 1341717 AAGCAATAGAAAAGA GAAGG TGA CCTTC CGCCGTCATGATAAA TERM 1624 1341873 - 1341900 + r 95 -17 -2.70932 | opp_overlap 1341873 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG TERM 1625 1341900 - 1341873 - R 100 -19.2 -4.16301 | opp_overlap 1341873 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG yniC 1342572 - 1341904 - | 2-deoxyglucose-6-phosphatase TERM 1626 1342904 - 1342915 + G 90 -7.2 -5.15381 | GATCGATATGATGCA GGCG AATA CGCC TTTTTTGAATCTGTT TERM 1627 1342981 - 1343001 + G 81 -6.1 -4.84359 | overlap 1342984 GCGTGAACGTTATGT TCTGGGTGA TTT TCATCCTGA TTTTTGTCGGACTGG SBO_1364 1342719 - 1343255 + | hypothetical protein TERM 1628 1343262 - 1343278 + T 72 -10.8 -2.79273 | opp_overlap 1343262, overlap 1343261 TTTATTTAATCAAAA GGCCGC ACAGA GCGGCC ATTATCTTCAACCCA TERM 1629 1343278 - 1343262 - T 93 -10.8 -4.43477 | opp_overlap 1343262 1343261 TTTATTTAATCAAAA GGCCGC ACAGA GCGGCC ATTATCTTCAACCCA SBO_1365 1344156 - 1343296 - | hypothetical protein TERM 1630 1343860 - 1343848 - G 90 -9.1 -4.48713 | CTGACCAAGAATAAA TGCGC TAT GCGCA TCCAGCGGACGAGGT SBO_1366 1344552 - 1344262 - | hypothetical protein TERM 1631 1344623 - 1344646 + r 100 -9.6 -5.06414 | overlap 1344625 CGACAGGTTGGTGGT GATTCCCCCA ATGC TGGGGGAATG TTTTTGTTAGCGGGA TERM 1632 1344625 - 1344644 + r 95 -12.2 -4.16307 | overlap 1344623 ACAGGTTGGTGGTGA TTCCCCCA ATGC TGGGGGAA TGTTTTTGTTAGCGG pfkB 1345582 - 1344653 - | 6-phosphofructokinase 2 TERM 1633 1345825 - 1345841 + H 100 -6.5 -5.88565 | CTTAAGAAAGTTTCC GGGACCG CGA TGGTCTC TTTTTTTGTTGTACG TERM 1634 1346002 - 1345992 - g 83 -5.4 -5.03314 | opp_overlap 1345992 GCCAGCGCTAAAAAA CCTT TCG AAGG TAATCTGAACGCAGG SBO_1368 1345869 - 1346627 + | hypothetical protein TERM 1635 1346634 - 1346662 + T 79 -10.9 -3.38317 | opp_overlap 1346633, overlap 1346632 1346636 AGCATGTAAAATTAT CTGCCGGACCGTG TTA TGCGGTCTGGCTG TCTTCGTTTGTCACT TERM 1636 1346636 - 1346660 + T 79 -12.1 -3.25317 | opp_overlap 1346633, overlap 1346634 1346632 CATGTAAAATTATCT GCCGGACCGTG TTA TGCGGTCTGGC TGTCTTCGTTTGTCA SBO_1369 1346898 - 1346680 - | hypothetical protein insB 1347477 - 1346974 - | IS1 ORF2 SBO_1371 1347552 - 1347731 + | putative IS1 encoded protein TERM 1637 1348529 - 1348541 + T 72 -9.1 -3.62522 | ATAAGCTGTTGAGTC TGGCC TGT GGCCA TTATTAACAACATTG SBO_1372 1349344 - 1349162 - | putative IS1 encoded protein insB 1349437 - 1349940 + | IS1 ORF2 TERM 1638 1351661 - 1351647 - g 73 -9.2 -3.61715 | CAGCGCCTGGAAGAA GCCGCG AAA CGCGAC CACCGTAAAATCGGT TERM 1639 1351862 - 1351852 - g 71 -2.4 -5.00616 | TCCTGTGGGAAAAAA CCGG TCA CTGG GACAACTACAAAGAT TERM 1640 1352531 - 1352556 + G 72 -8.9 -3.8512 | overlap 1352533 ATTCGCTGGTTTCTT CCCGACCTGGC TTGC GCCAGTTCAGG TTGTTATCATGAATA thrS 1350933 - 1352861 + | threonyl-tRNA synthetase TERM 1641 1353265 - 1353241 - g 72 -6.4 -4.39571 | gap 1 GTGATAAAGCCAAAA TCACG-CTGCG TTTC CGCGGTCGTGA GATGGCGCACCAGCA infC 1352973 - 1353407 + | translation initiation factor IF-3 TERM 1642 1353424 - 1353453 + F 76 -9.3 -3.72593 | opp_overlap 1353420, overlap 1353446 GCCTTCAAGTAGCAC TATCTGTGGAGCC TTTG GGCTTCACAGGCA TTGTTCGCCTTTGTT rpmI 1353504 - 1353701 + | 50S ribosomal protein L35 rplT 1353754 - 1354086 + | 50S ribosomal protein L20 TERM 1643 1354123 - 1354141 + F 93 -10.3 -4.54727 | opp_overlap 1354123 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1644 1354141 - 1354123 - f 79 -10.3 -3.62418 | opp_overlap 1354123 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1645 1354328 - 1354343 + F 100 -10.4 -5.71712 | opp_overlap 1354328 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1646 1354343 - 1354328 - f 79 -10.4 -3.55815 | opp_overlap 1354328 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1647 1354390 - 1354376 - f 82 -2.7 -5.61881 | TTTGAAAAATAAAAA GCCAG TCTAT CAGGC GTAATTGTCGCAGCC TERM 1648 1354678 - 1354666 - g 71 -2.6 -5.0133 | TATTTGGGTAAAAAA GGGC ACTTA ACCC TTCAGATGACGACCC pheS 1354561 - 1355544 + | phenylalanyl-tRNA synthetase subunit alpha pheT 1355559 - 1357946 + | phenylalanyl-tRNA synthetase subunit beta ihfA 1357951 - 1358250 + | integration host factor subunit alpha TERM 1649 1358282 - 1358268 - f 100 -12.8 -4.88407 | opp_overlap 1358268 TGATCTAACTAAAAA GGCCGC TCT GCGGCC TTTTTTCTTTCAATA TERM 1650 1358268 - 1358282 + F 100 -12.8 -5.65927 | opp_overlap 1358268 TGATCTAACTAAAAA GGCCGC TCT GCGGCC TTTTTTCTTTCAATA TERM 1651 1358371 - 1358388 + F 72 -6.2 -4.29907 | opp_overlap 1358371 GGGGGAGGGGAGTAA GCCCGC TACATT GTGGGC TTTGTCTTATAGTCT TERM 1652 1358443 - 1358464 + F 86 -9.4 -4.5032 | opp_overlap 1358443 1358442 ACACCAAAAAGAACC CCCGCAGT TTTTAC GCTGCGGG TTTGTTGTTCATGTC TERM 1653 1358512 - 1358553 + F 81 -12.4 -3.27774 | gap 2, opp_overlap 1358521, overlap 1358506 1358517 TATCGACCTTACCCT GGCAACCGATTGACGGGGGA TTGC TCCCCCGTCG--CGGTTTCC TTACTGCTTACACTG TERM 1654 1358517 - 1358548 + F 80 -9.5 -3.98113 | gap 2, opp_overlap 1358521, overlap 1358506 1358512 ACCTTACCCTGGCAA CCGATTGACGGGGGA TTGC TCCCCCGTCG--CGG TTTCCTTACTGCTTA TERM 1655 1358755 - 1358787 + F 72 -9.2 -3.59262 | gap 1 AGGGTAGACGGTTAG GGCCTCGGTTAAACA AAAA TGTTTT-CCGGGGCC TTTCCACATCTGGCC SBO_1382 1359033 - 1359398 + | insertion sequence 2 OrfA protein SBO_1383 1359356 - 1360261 + | insertion element IS2 transposase InsD TERM 1656 1360597 - 1360571 - T 74 -7.3 -4.21974 | gap 1, overlap 1360575 GCATTAGTTAATAAA CGAACGGCACTC TAAG GAGCGCCG-TCA AAGATATTATTCTGA TERM 1657 1360594 - 1360575 - T 86 -11.4 -3.69809 | overlap 1360571 TAGTTAATAAACGAA CGGCACTC TAAG GAGCGCCG TCAAAGATATTATTC SBO_1384 1363723 - 1360604 - | hypothetical protein TERM 1658 1362464 - 1362452 - G 87 -4.9 -5.20154 | opp_overlap 1362452 ACATAATTCAAAAAA TCTTT CAG AAAGA TTAATTTTATCCATG TERM 1659 1363319 - 1363300 - G 90 -7.8 -4.77567 | ATCCTGATAAGAAAA GCCCGCTG AGTC CAGCAAGC ATGAATCCTGAGTAA TERM 1660 1363627 - 1363652 + g 72 -4.9 -4.66264 | opp_overlap 1363627 1363638, overlap 1363634 TTTTTTCAATAAAAT TCCATTTTA AATTCGAA TAAAATGGA TTTTTAACCATTTTA TERM 1661 1363905 - 1363915 + r 76 -4 -4.93661 | GACATCTAGTGGGCT GATA CAT TATC TTTTGTTCTTACTGT SBO_1385 1364892 - 1363972 - | putative bacteriophage late gene regulator TERM 1662 1364332 - 1364349 + g 100 -4.1 -5.93252 | gap 1, overlap 1364332 1364333 GGGTTTTGGCGGTTT G-CGGCGT TTC ACGCTGAC TTTTTTCTTTTTCCC SBO_1386 1365239 - 1366423 + | putative tail sheath protein SBO_1387 1366423 - 1366743 + | putative tail tube protein TERM 1663 1367268 - 1367278 + G 71 -3.2 -4.73635 | ATGATTAAAAAAATG TCGT CAC GCGA TTTTATTCAGTTGTG SBO_1388 1367121 - 1367363 + | putative tail protein TERM 1664 1367400 - 1367417 + F 84 -8.4 -4.68593 | overlap 1367395 ACATCGAAGATCTGG TGGCGG ATATTG CCGCCA TTTTTAACTGGTCGC TERM 1665 1367734 - 1367694 - g 91 -12.6 -3.72893 | gap 1, opp_overlap 1367693 1367692 GACGCTGTCAGTAAA GCG-GATGCTGGCATCGTG AAAG CACGACGCCAGCTTAACGC CCTTAATCAGTTACA TERM 1666 1367796 - 1367786 - g 90 -6.8 -5.16681 | overlap 1367778 CGAAAAACAACAAAA GCTG ATG CAGC AGTTAAGCACCCGGC TERM 1667 1368076 - 1368100 + G 95 -9.1 -5.02074 | overlap 1368072 CAATTGGTGCGGCAG CGGCGGGCGGC TAT GCTGCCGGGCG TTTTTTGCAGCCTGC TERM 1668 1370277 - 1370302 + G 100 -11.1 -4.62069 | gap 1, opp_overlap 1370273 1370272 1370277, overlap 1370278 AGGGCAGAAATGGAA CGG-CGCGCCCG TGC CGGGCGTGGCTG TTTTTACGATAAAGA TERM 1669 1370278 - 1370300 + G 93 -12.6 -3.92746 | opp_overlap 1370273 1370272 1370277, overlap 1370277 GGGCAGAAATGGAAC GGCGCGCCCG TGC CGGGCGTGGC TGTTTTTACGATAAA SBO_1389 1367514 - 1370321 + | putative tail protein TERM 1670 1370444 - 1370426 - g 72 -4.6 -4.62069 | GCGGCATGTGAAAAA TGAACG CGTTAAC CGTTCA GCAAGCTGGCAGTAT TERM 1671 1370702 - 1370738 + G 83 -13.2 -3.1211 | gap 1 GACTCTTGAACGCTG TGATGAGGATTTGCGGG AGCG CCTGCAA-TCCTCATCG TTCAGTGATATGCTG SBO_1390 1370334 - 1370822 + | putative tail protein TERM 1672 1370863 - 1370830 - T 70 -9.8 -3.08679 | opp_overlap 1370831 1370836, overlap 1370836 TGTTCTGATTTAACA CAAAAACCGCTAAT GGTCAG ATTAGCGGTTTTCA TTTTCCTGAGTCTGC TERM 1673 1370857 - 1370836 - T 100 -8.8 -5.10767 | opp_overlap 1370836 1370831, overlap 1370830 GATTTAACACAAAAA CCGCTAAT GGTCAG ATTAGCGG TTTTCATTTTCCTGA TERM 1674 1370836 - 1370857 + T 89 -8.8 -4.70319 | opp_overlap 1370830 1370836, overlap 1370831 GATTTAACACAAAAA CCGCTAAT GGTCAG ATTAGCGG TTTTCATTTTCCTGA SBO_1391 1371450 - 1370851 - | putative DNA-invertase TERM 1675 1372628 - 1372617 - g 72 -5.8 -4.42386 | overlap 1372621 TTGTCAGGGATAAAA CCCA GCTA TGGG ACTCACAGCTACGGC SBO_1392 1372229 - 1372762 + | putative tail fiber assembly protein TERM 1676 1372768 - 1372783 + T 74 -8.2 -3.84901 | opp_overlap 1372768, overlap 1372764 ACCAGAATGAGAGAA GGCCCG ATAT TGGGCC TTAATTTTTACTCAG SBO_1393 1373354 - 1372791 - | putative tail fiber assembly protein SBO_1394 1375473 - 1373323 - | putative bacteriophage tail protein SBO_1395 1376006 - 1375476 - | putative phage tail protein SBO_1396 1376895 - 1375999 - | phage baseplate assembly protein SBO_1397 1377228 - 1376899 - | phage baseplate assembly protein SBO_1398 1377812 - 1377246 - | putative phage baseplate assembly protein SBO_1399 1378459 - 1377824 - | putative phage tail completion protein SBO_1400 1378919 - 1378452 - | putative phage tail protein SBO_1401 1379464 - 1379057 - | hypothetical protein SBO_1402 1379853 - 1379461 - | putative endolysin TERM 1677 1379983 - 1379946 - R 80 -9.9 -3.86346 | gap 1, overlap 1379976 TGATGCGCCGATAAA CGTCACGGCATCTTCAGG AAA CCCGAAGAAGC-GCAACG ACCCGGCCACGGCCA SBO_1403 1380409 - 1380176 - | phage tail protein TERM 1678 1380275 - 1380293 + gr 72 -6.6 -4.18018 | CTGCTGACAGAGTCC GGGGTTGG CAT CCAGCACC TTTTCGGTGACGCCC SBO_1404 1380870 - 1380376 - | putative capsid completion protein SBO_1405 1381782 - 1381036 - | putative phage terminase TERM 1679 1381103 - 1381113 + g 71 -2.4 -5.00616 | overlap 1381092 TCTTCTGGTTCGGCT GCGG AAT CGGC TTTTTTCAGGGCGCG TERM 1680 1381702 - 1381716 + g 80 -11.4 -3.33696 | ATGCGCGGTACGCGC GGCGTG GTC CACGCC TTCATTCGCCCGGCC TERM 1681 1381794 - 1381823 + r 70 -9.3 -3.39142 | gap 1, overlap 1381795 TCATTTTTGCTCTCC GTTACAGGCGGGCA TGA TGCCCGCC-GTGAG TTGATTAGCTGTCGG TERM 1682 1381795 - 1381822 + r 78 -12.8 -2.63164 | gap 1, overlap 1381794 CATTTTTGCTCTCCG TTACAGGCGGGCA TGA TGCCCGCC-GTGA GTTGATTAGCTGTCG SBO_1406 1382700 - 1381828 - | major capsid protein TERM 1683 1382680 - 1382701 + g 73 -3.7 -4.8487 | gap 1, overlap 1382680 1382681 GATTTTTTCGCCTTT C-TGGTCGGT CAC GCCGATCACG TTATTTTTTTCGTAA SBO_1407 1383739 - 1382903 - | putative capsid scaffolding protein TERM 1684 1382969 - 1382980 + g 83 -5.8 -4.88407 | overlap 1382955 CTGCGGATCGCCGTC CTGC GTGC GCAG TTTTTCCTTCAGTGC TERM 1685 1383692 - 1383722 + g 100 -6.9 -5.63103 | gap 1 AACAGTTGATCCGGA GACAGCCACGCGAA ACTT TTTGCG-GGATGTC TTTTTTTCATTAGCC SBO_1408 1383894 - 1385645 + | terminase subunit SBO_1409 1385645 - 1386691 + | capsid portal protein TERM 1686 1387022 - 1387038 + T 91 -6.5 -5.60993 | TTCCCCCGTCACCTG CGCGC AGAAAAA GCGCG TTTTTTTGTGCACGC TERM 1687 1387135 - 1387116 - T 76 -2.1 -5.40474 | opp_overlap 1387116 1387118, overlap 1387118 ATTCGTTCAAAAAAA TTGTGCA AATTTG TGCACTA TTGTGCAGCAGGGCG TERM 1688 1387144 - 1387169 + T 73 -11.2 -2.72144 | overlap 1387143 1387146 TGCACTATTGTGCAG CAGGGCGATG TGCGAT TATCGCCCTG GTTTGAGGGGGATCA SBO_1410 1387772 - 1387182 - | putative phage-related protein TERM 1689 1387809 - 1387828 + r 72 -9.2 -3.49835 | opp_overlap 1387812, overlap 1387807 1387810 1387812 GTTCTGAGGTGGAGA GCAGGGCG AACT CGCCCTGA TGTTGTGTTATTCAG TERM 1690 1387810 - 1387827 + r 78 -12.7 -2.69178 | opp_overlap 1387812, overlap 1387809 1387807 1387812 TTCTGAGGTGGAGAG CAGGGCG AACT CGCCCTG ATGTTGTGTTATTCA SBO_1411 1388772 - 1388152 - | putative stability/partitioning protein TERM 1691 1388323 - 1388310 - G 83 -5.2 -5.09426 | opp_overlap 1388314 1388317 CGTAACCCGAAAAAA CCGC CAGCGC GCGG ATCACGCGTTGTTTC TERM 1692 1388314 - 1388334 + g 72 -8.9 -3.84931 | opp_overlap 1388310, overlap 1388317 ACCCGAAAAAACCGC CAGCGCGCG GAT CACGCGTTG TTTCAGTGTTTCTTC TERM 1693 1388317 - 1388331 + g 70 -7 -4.02707 | opp_overlap 1388310, overlap 1388314 CGAAAAAACCGCCAG CGCGCG GAT CACGCG TTGTTTCAGTGTTTC TERM 1694 1388565 - 1388542 - G 70 -6.6 -4.13767 | overlap 1388545 GTGTGGATCGCAAAA CACCTGGCTG ATAC CTGCCAGTTG CCCCTGAACCTTTGC SBO_1412 1389605 - 1388766 - | IS911 ORF2 TERM 1695 1389174 - 1389185 + g 77 -5.8 -4.63218 | opp_overlap 1389170 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 1696 1389526 - 1389546 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SBO_1413 1389958 - 1390260 + | IS2 ORF2 SBO_1414 1390467 - 1390231 - | hypothetical protein TERM 1697 1390403 - 1390434 + g 70 -5.9 -4.2461 | GCATGAGCGCCTGAT GCACTTAAGCG AAAATAAAAA CGCTCAAGTGC TTTGTTAATGAGAGT SBO_1415 1391609 - 1390722 - | IS629 ORF2 TERM 1698 1391289 - 1391301 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_1416 1391884 - 1391609 - | IS629 ORF1 TERM 1699 1393056 - 1393070 + H 100 -12.8 -5.80951 | TTTACTTGTGTTTAT GGCCGC TCT GCGGCC TTTTTTCTTTTCACT btuC 1393139 - 1394119 + | vtamin B12-transporter permease btuE 1394182 - 1394733 + | putative glutathione peroxidase btuD 1394733 - 1395482 + | vitamin B12-transporter ATPase TERM 1700 1395853 - 1395868 + G 72 -5.4 -4.56597 | gap 1, overlap 1395854 TAAAGACAAGTTGCT G-CCAGG TGA CCTGGTC TTTTTCAAAACGGGG TERM 1701 1395854 - 1395866 + G 78 -9.1 -3.90048 | overlap 1395853 AAAGACAAGTTGCTG CCAGG TGA CCTGG TCTTTTTCAAAACGG nlpC 1395560 - 1396024 + | lipoprotein TERM 1702 1396063 - 1396037 - f 100 -21 -4.60487 | opp_overlap 1396037 TAGTATGTCGAAAAA TGGACGGCGATG ATA CATCGCCGTCCA TTTACTCCTGAATAC TERM 1703 1396037 - 1396063 + F 100 -21 -3.79747 | opp_overlap 1396037 TAGTATGTCGAAAAA TGGACGGCGATG ATA CATCGCCGTCCA TTTACTCCTGAATAC SBO_1421 1396270 - 1396983 + | hypothetical protein SBO_1422 1397046 - 1398482 + | hypothetical protein ydiE 1398677 - 1398486 - | hypothetical protein TERM 1704 1398803 - 1398780 - R 95 -13.2 -3.86822 | CAAGTTGCGCAGAAA TGCCCATCCC ATCA GGAATGGGCA CGCATTCAGAAGCGG aroH 1399855 - 1398809 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1705 1399201 - 1399214 + g 86 -6.7 -4.96848 | opp_overlap 1399201, overlap 1399191 CGCTGGTCTGATAGA TGGTC ATCT GACCA TTTTTGTCTGGCGAG TERM 1706 1400006 - 1399995 - R 73 -2.2 -5.22768 | opp_overlap 1400003, overlap 1399999 ATAACAAAAAACAAA CCAG CGCA CTAG TTCTCTAGTACATTC ydiA 1400844 - 1400011 - | hypothetical protein SBO_1426 1401458 - 1402363 + | insertion element IS2 transposase InsD TERM 1707 1404201 - 1404219 + G 78 -8 -4.36914 | opp_overlap 1404200, overlap 1404213 1404216 TCTGACTGAAGGGAT CGCGACGC TGG GTGCCGCG TTTTATCCGAAGCGC ppsA 1402513 - 1404891 + | phosphoenolpyruvate synthase TERM 1708 1404928 - 1404894 - T 79 -4.1 -5.10665 | opp_overlap 1404900, overlap 1404898 1404900 ACTGAAGAAATAAAA TAAATACCCGGCGGC GTTTT GTCGCCGGGTTTATG TGATCCCCGAAGATG TERM 1709 1404924 - 1404898 - T 100 -9.3 -5.02645 | opp_overlap 1404900, overlap 1404894 1404900 AAGAAATAAAATAAA TACCCGGCGGC GTTTT GTCGCCGGGTT TATGTGATCCCCGAA TERM 1710 1404922 - 1404900 - T 95 -11.9 -4.08474 | opp_overlap 1404900, overlap 1404898 1404894 GAAATAAAATAAATA CCCGGCGGC GTTTT GTCGCCGGG TTTATGTGATCCCCG TERM 1711 1404900 - 1404922 + T 100 -14.8 -4.08706 | opp_overlap 1404900 1404898 1404894 GAAATAAAATAAATA CCCGGCGGCG TTT TGTCGCCGGG TTTATGTGATCCCCG SBO_1428 1405280 - 1404948 - | putative IS1 encoded protein insB 1405373 - 1405876 + | IS1 ORF2 TERM 1712 1406405 - 1406389 - T 81 -12.3 -3.29459 | opp_overlap 1406401, overlap 1406384 CACTTAATAATTTAA TGCCAGC GCT GCTGGCA TTCACGTGCCACTTT TERM 1713 1406546 - 1406514 - T 83 -9.8 -4.16904 | overlap 1406535 AAGATCATAGACAAA CGGCGTTGCGCCTA GCATA CAGGTGCAACGCTG CTGCTCAAGCAGCGC TERM 1714 1407235 - 1407250 + T 72 -5.4 -4.54047 | TACGTTGCACCATGA TTGTCG ACCA CGGCAA TTTTGTCTGGCATCG TERM 1715 1407417 - 1407392 - T 86 -11.2 -3.81755 | gap 1, overlap 1407395 ACTCTCGAAACAGAA CATCAGGCCCG AGATG CGGGCCTG-TG GGATGCATGATTAGC TERM 1716 1407415 - 1407395 - T 83 -14 -2.69057 | overlap 1407392 CTCGAAACAGAACAT CAGGCCCG AGATG CGGGCCTG TGGGATGCATGATTA ydiT 1407721 - 1407428 - | hypothetical protein ydiS 1409007 - 1407718 - | hypothetical protein ydiR 1410001 - 1409063 - | electron transfer flavoprotein subunit YdiR TERM 1717 1411041 - 1411073 + H 80 -6.3 -4.90869 | opp_overlap 1411025 1411048, overlap 1411049 GCGGTTGTATAACCG CAATACACGCCGTAT TTT ATCCGGCATATATTG TTTTTGCTTGCTCAT SBO_1435 1411106 - 1412017 + | putative ARAC-type regulatory protein TERM 1718 1412056 - 1412019 - T 87 -11.2 -3.85698 | opp_overlap 1412018 1412015, overlap 1412020 1412044 GTCTTGTTGGATAAA TCTGGCGGCGCAGTTT GTTAAG AAGCTGCGCCGCCTGC AGATTATTTGTTCTG TERM 1719 1412055 - 1412020 - T 87 -14.7 -2.91276 | opp_overlap 1412018 1412015, overlap 1412019 1412044 TCTTGTTGGATAAAT CTGGCGGCGCAGTTT GTTAAG AAGCTGCGCCGCCTG CAGATTATTTGTTCT SBO_1436 1413211 - 1412060 - | putative acyl-CoA dehydrogenase TERM 1720 1413529 - 1413541 + r 82 -7.7 -4.55887 | opp_overlap 1413528 TAGACGATATTTAAT TTGCC ATC GGCAA TTTCTGTTTTTAAAC TERM 1721 1414925 - 1414958 + r 80 -9.6 -3.86312 | overlap 1414928 TGAATATATTTTTTT TAGTTCGGCGGGGG AGGATA TTCCCGCCGAAATA TTATTGCTTATGCCT TERM 1722 1414928 - 1414955 + r 73 -11.3 -2.70018 | overlap 1414925 ATATATTTTTTTTAG TTCGGCGGGGG AGGATA TTCCCGCCGAA ATATTATTGCTTATG aroD 1415724 - 1414966 - | 3-dehydroquinate dehydratase TERM 1723 1415019 - 1415034 + g 91 -5.4 -5.40072 | gap 1 CATTTACCGAGATTT GCC-CTG GCG CAGAGGC TTTTTTTACCGCACC SBO_1440 1417353 - 1416634 - | putative amino acid/amine transport protein SBO_1441 1417624 - 1417301 - | hypothetical protein TERM 1724 1417555 - 1417568 + gr 70 -6.7 -4.11216 | opp_overlap 1417555 CTACACGATCAGGAA TGGCA CACT TGCCA TTTTCCCACTGACGC TERM 1725 1417845 - 1417826 - R 100 -9.3 -5.82388 | AAATGTTAAAAAAAA GCCCATC GTGGGA GATGGGC AAAGACTACACACAG TERM 1726 1418101 - 1418081 - R 100 -16.9 -3.61517 | opp_overlap 1418074 1418074 AGCGGGGGTTAACAA TCAGGCGGC AGA GCCGCCTGA TGAGAAATTACTTAT SBO_1442 1419221 - 1418109 - | putative inner membrane protein TERM 1727 1420008 - 1420029 + G 76 -3.7 -5.00616 | opp_overlap 1420005 AGATCAACTCAATCA GTACCTGAA ACCG TTCGGCTAC TTTTTTGCGCCGGAA ydiJ 1419610 - 1422666 + | putative oxidase SBO_1444 1422663 - 1423073 + | hypothetical protein SBO_1445 1423092 - 1423361 + | hypothetical protein TERM 1728 1423586 - 1423616 + F 100 -17 -5.05116 | opp_overlap 1423586 CGGATGGGGTAGAAA CCCTTAAGCCTGTG TCG CACAGACTTAAGGG TTTTCTTATTTCTGA TERM 1729 1423616 - 1423586 - f 100 -19.2 -3.86897 | opp_overlap 1423586 CGGATGGGGTAGAAA CCCTTAAGCCTGTG TCG CACAGACTTAAGGG TTTTCTTATTTCTGA sufA 1423909 - 1424277 + | iron-sulfur cluster assembly scaffold protein TERM 1730 1424625 - 1424636 + GF 81 -7.2 -4.65895 | opp_overlap 1424624 GCGGTGCAGCAAACT GGCG CGAA CGCC TTTTTAAGTAAAGAG ynhE 1424247 - 1425773 + | cysteine desulfurase activator complex subunit SufB sufC 1425783 - 1426529 + | cysteine desulfurase ATPase component ynhC 1426504 - 1427775 + | cysteine desulfurase activator complex subunit SufD SBO_1450 1427772 - 1428992 + | selenocysteine lyase ynhA 1429005 - 1429421 + | cysteine desufuration protein SufE TERM 1731 1429740 - 1429719 - g 71 -2.1 -4.88388 | opp_overlap 1429720 1429722, overlap 1429720 AGAAGGGGATAAAAA CCTTCAGGC TATT GCCCGACGT TTTGATACTGCGGCA ynhG 1429570 - 1430574 + | hypothetical protein TERM 1732 1430597 - 1430615 + T 100 -14.6 -4.74103 | opp_overlap 1430597 TAGCAGACAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCACTTCACAG TERM 1733 1430615 - 1430597 - T 100 -14.6 -5.74122 | opp_overlap 1430597 TAGCAGACAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCACTTCACAG lpp 1430873 - 1430637 - | murein lipoprotein TERM 1734 1430711 - 1430736 + g 70 -9.7 -3.17212 | gap 1 CTTTAGCAGCCTGAA CGTCG-GAACGC ATT GCGTTCACGTCG TTGCTCAGCTGGTCA TERM 1735 1431136 - 1431152 + r 74 -10.8 -3.12847 | opp_overlap 1431136 GATTAAATAAAAAAA GCGCCC ATCAG GGGCGC TTCGATATACAAATT TERM 1736 1431152 - 1431136 - R 100 -10.8 -5.99154 | opp_overlap 1431136 GATTAAATAAAAAAA GCGCCC ATCAG GGGCGC TTCGATATACAAATT pykF 1432597 - 1431185 - | pyruvate kinase TERM 1737 1431637 - 1431625 - G 81 -9.1 -4.08706 | opp_overlap 1431624 1431622 1431625 TCGCCATGATAGAAA CCGCT TCC AGCGG GTATTTACCTTTTGC SBO_1455 1433154 - 1433363 + | hypothetical protein TERM 1738 1433367 - 1433398 + T 77 -8.9 -3.83675 | gap 1, opp_overlap 1433362, overlap 1433368 CTGGTAAAATGACCA T-TCAGGATGAGGC GGTAA GCTTCATCCTGATA TTCTTGCTTCAGTTG TERM 1739 1433368 - 1433396 + T 93 -14 -3.4945 | opp_overlap 1433362, overlap 1433367 TGGTAAAATGACCAT TCAGGATGAGGC GGTAA GCTTCATCCTGA TATTCTTGCTTCAGT SBO_1456 1433733 - 1433551 - | putative IS1 encoded protein insB 1433826 - 1434329 + | IS1 ORF2 TERM 1740 1434411 - 1434421 + F 79 -2.6 -5.31275 | opp_overlap 1434411 GTTAAGGGCTCAGAA TAAT CAC ATTA TTTTTTCTCCTAACC SBO_1458 1434596 - 1435273 + | hypothetical protein TERM 1741 1436169 - 1436153 - gf 81 -6.5 -4.87037 | opp_overlap 1436156, overlap 1436154 AATACACAGTAAAAA TGAGTGG CTG CCACTCT TGCCCGATCCGTTGT TERM 1742 1436168 - 1436154 - gf 75 -10 -3.50595 | opp_overlap 1436156, overlap 1436153 ATACACAGTAAAAAT GAGTGG CTG CCACTC TTGCCCGATCCGTTG TERM 1743 1437252 - 1437239 - gf 70 -4.5 -4.55295 | opp_overlap 1437242, overlap 1437240 1437241 TGTTCTACAAAGAAA TGGGC TGGG ACCCA CAGCTTGGTTGTCCC SBO_1459 1435243 - 1437345 + | putative oxidoreductase SBO_1460 1437349 - 1437996 + | hypothetical protein SBO_1461 1438009 - 1438728 + | putative oxidoreductase, Fe-S subunit ydhU 1438725 - 1439510 + | hypothetical protein SBO_1463 1439514 - 1440326 + | hypothetical protein SBO_1464 1441942 - 1440338 - | hypothetical protein TERM 1744 1440532 - 1440549 + g 72 -4.9 -4.62002 | gap 1, opp_overlap 1440534, overlap 1440534 AATCTTCGCCAACAT CA-GGGAT TTC ATCCCCTG TTTTCTGTAATTGCT TERM 1745 1441762 - 1441788 + g 71 -2.2 -4.88222 | opp_overlap 1441767, overlap 1441763 1441765 TAATCGGCGGTATTT CAATACTGGCAA TAT TTGCCAGCATCA TTTTTGAGTTTTCCT TERM 1746 1441783 - 1441767 - G 72 -10.9 -3.05844 | opp_overlap 1441765 1441763 1441762 GGCGGTATTTCAATA CTGGCAA TAT TTGCCAG CATCATTTTTGAGTT TERM 1747 1442053 - 1442039 - R 79 -8.5 -4.3014 | opp_overlap 1442039 AGACAGGGATGAAAA GGGCG CTAAC CGCCC TTGATTAAATTCTGT TERM 1748 1442068 - 1442086 + r 75 -9.6 -3.54676 | opp_overlap 1442064, overlap 1442064 CTTGATTAAATTCTG TCAGGCGA GTT TTGCCTGA TTGATTTGACTAAGT SBO_1465 1442373 - 1442068 - | hypothetical protein TERM 1749 1442485 - 1442463 - H 76 -4.9 -4.78661 | overlap 1442465 1442479 AGGGAAAAAGGAAAA GACCAGATT AAGAA AATCTGGTG CGTCCGAGTGGACTC TERM 1750 1442483 - 1442465 - H 71 -7.5 -3.99386 | overlap 1442463 1442479 GGAAAAAGGAAAAGA CCAGATT AAGAA AATCTGG TGCGTCCGAGTGGAC TERM 1751 1442510 - 1442479 - H 80 -6.7 -4.76075 | gap 2, overlap 1442465 1442463 ACCAGATTAAGAAAA TCTGGTGCGTCCGAG TGGA CTCGAAC-CACC-GA CCCCCACCATGTCAA TERM 1752 1442688 - 1442699 + H 70 -2.2 -5.07486 | overlap 1442696 CTATATTTTGTTGAT TTGC AAGG GCGA TTTTTATTCAGGATC TERM 1753 1443829 - 1443841 + G 74 -7.7 -4.09805 | opp_overlap 1443829 1443828 GCAGTACGGTAAAAG GTGAC AGC GTCAC TTTCATTGTTGGTAA SBO_1467 1442865 - 1444121 + | hypothetical protein TERM 1754 1444123 - 1444157 + T 79 -9.4 -4.15044 | gap 1, opp_overlap 1444125 1444129, overlap 1444129 TCCAGCCTGCGTAAA AACACAGGCGCAACC CGTGAA GGTTGCGCCT-TGTC TTTATTAGCGGGACG TERM 1755 1444155 - 1444125 - T 100 -12.7 -4.57073 | gap 1, opp_overlap 1444123 1444129, overlap 1444129 CAGCCTGCGTAAAAA CACAGGCGCAACCC GTGA AGGTTGCGCCT-TG TCTTTATTAGCGGGA TERM 1756 1444129 - 1444152 + T 100 -13.9 -3.96841 | opp_overlap 1444125 1444129, overlap 1444123 CTGCGTAAAAACACA GGCGCAACC CGTGAA GGTTGCGCC TTGTCTTTATTAGCG TERM 1757 1444152 - 1444129 - T 95 -14.6 -3.53855 | opp_overlap 1444129 1444123, overlap 1444125 CTGCGTAAAAACACA GGCGCAACCC GTGA AGGTTGCGCC TTGTCTTTATTAGCG ydhE 1445535 - 1444162 - | multidrug efflux protein TERM 1758 1445593 - 1445576 - H 80 -6.2 -4.85129 | overlap 1445567 ATGAGAGACTAAAAA GCCGCC TGAATG GGCAGC AAAAAGAAGAAGCAG TERM 1759 1446192 - 1446216 + G 70 -3.5 -4.69027 | gap 1, overlap 1446192 1446193 1446213 ACGGTATTAGCCTGA C-CGTCGGCG AAGTCA CGCCAACGCG TTTTTGCGTCCATTT ribE 1445750 - 1446391 + | riboflavin synthase subunit alpha TERM 1760 1446419 - 1446399 - T 93 -14 -3.60475 | opp_overlap 1446415 AAGCCTGATCTGAAA TCGCCCCC GGAGA GGGGGCGA TAGAATAGCCTTTAG cfa 1447579 - 1446431 - | cyclopropane fatty acyl phospholipid synthase ydhC 1449081 - 1447870 - | inner membrane transport protein YdhC ydhB 1449194 - 1450126 + | putative DNA-binding transcriptional regulator purR 1451148 - 1450123 - | DNA-binding transcriptional repressor PurR TERM 1761 1450574 - 1450553 - G 81 -8.7 -4.37092 | gap 1, opp_overlap 1450553 1450551 ATCGCCTTCATAAAA CCGGCA-AGG CGG CCTGCGCCGG TGTTACGTTCCAGCG TERM 1762 1450611 - 1450623 + g 72 -10.5 -3.06796 | GGATGACGCCGATTT CGCGG TGA CCGCG TTCAATCAGATAACG TERM 1763 1451051 - 1451075 + g 95 -9.3 -4.79174 | overlap 1451044 GCCCACACGGCGTTG CGCGTTTCTTC AGC GACGAAACGTG TTTTGTTGATTACGT TERM 1764 1451099 - 1451133 + g 79 -4.4 -4.90079 | gap 1, opp_overlap 1451099, overlap 1451101 ATTACGTGTGACACA GTTGTAGTGGAAACG TTTGCT CGTTTC-GCTACATC TTTTATTGTTGCCAT TERM 1765 1451585 - 1451619 + H 72 -3 -4.96276 | CTCCTTCCTGTTTGT TAGCAAAATGGCAAAA GTG TTTTCTCTTTTTGTTA TTTTCATTTTTTTGT TERM 1766 1452861 - 1452845 - g 70 -5.1 -4.42653 | overlap 1452855 1452857 ATGTCAGCCAGAAAA CAACCTG AAA CAGTTTG CGTTGCTAACAGCTA SBO_1474 1451702 - 1452877 + | putative transport protein TERM 1767 1452910 - 1452889 - T 100 -14.5 -5.38326 | opp_overlap 1452883 CTAATTAAACAAAAA CGCAGAAGG ATAA CCTTCTGCG TTACAGTTGCTGACA sodB 1453604 - 1453023 - | superoxide dismutase TERM 1768 1453699 - 1453729 + r 79 -9.2 -4.09511 | gap 1, opp_overlap 1453695 1453699 1453700, overlap 1453699 GAGACAAAAGATGAA CTT-ACCCTGTTG CCGTAA CAACAGGGTAAAG TTTTAGCGAAGTGTT TERM 1769 1453728 - 1453699 - R 88 -12.3 -3.59432 | opp_overlap 1453699 1453699, overlap 1453695 1453700 GAGACAAAAGATGAA CTTACCCTGTTGC CGTA ACAACAGGGTAAA GTTTTAGCGAAGTGT TERM 1770 1453727 - 1453700 - R 83 -13.6 -2.74575 | opp_overlap 1453699 1453699, overlap 1453699 1453695 AGACAAAAGATGAAC TTACCCTGTTGC CGTA ACAACAGGGTAA AGTTTTAGCGAAGTG ydhO 1454547 - 1453732 - | putative lipoprotein TERM 1771 1454150 - 1454179 + g 90 -7.9 -4.81249 | gap 1 TGCACCTTCGCTTTG TG-CGCGTCGGCAA GAG TTCCTGACGCGGCA TTTTTGACTTTCACA TERM 1772 1454241 - 1454252 + g 70 -3.6 -4.63486 | overlap 1454248 1454249 ACTTTTCGGTAAAGC TGGC TGAG GCCG TTTTATTGACGGCGT insB 1455196 - 1454693 - | IS1 ORF2 SBO_1478 1455289 - 1455459 + | putative IS1-encoded protein ydhD 1455557 - 1455904 + | hypothetical protein TERM 1773 1455916 - 1455949 + F 83 -9.6 -4.12532 | opp_overlap 1455905 1455919, overlap 1455919 ATAATCCGTCCTGCA ATACTGACGGATGC GAACGG GCATCCGTCAGTCC TTTCTCTATCCCCAA TERM 1774 1455946 - 1455919 - f 93 -15.7 -3.01791 | opp_overlap 1455919 1455916, overlap 1455905 ATCCGTCCTGCAATA CTGACGGATGC GAACGG GCATCCGTCAG TCCTTTCTCTATCCC TERM 1775 1455919 - 1455946 + F 93 -15.7 -3.09116 | opp_overlap 1455905 1455919, overlap 1455916 ATCCGTCCTGCAATA CTGACGGATGC GAACGG GCATCCGTCAG TCCTTTCTCTATCCC SBO_1480 1456424 - 1456699 + | IS629 ORF1 TERM 1776 1457019 - 1457007 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_1481 1456699 - 1457586 + | IS629 ORF2 lhr 1461725 - 1457589 - | ATP-dependent helicase superfamily protein TERM 1777 1460687 - 1460675 - G 72 -6.9 -4.19624 | CACTGGCAACAGAAA GCGGC GTT GCCAC CTGAATCACCAGATC rnt 1462465 - 1461818 - | ribonuclease T TERM 1778 1462442 - 1462428 - G 77 -7.1 -4.45077 | opp_overlap 1462427 TAAAAACCACGAAAA CGGTC GCACA GACCG GTAAGTTGAGCGTTA TERM 1779 1462562 - 1462535 - R 73 -9.9 -3.46647 | gap 1, overlap 1462533 TCGATGCAGTAAAGA TG-CGGGCGCGA TGAGT TCACGCCCGGCA GGAGATTAGTTGCCC gloA 1462975 - 1462568 - | glyoxalase I TERM 1780 1462697 - 1462710 + g 71 -2.3 -5.01732 | overlap 1462698 ACGGGTCACGTTACC CCCGT TTTG ACGGA TTTTTTCGCACGCTT TERM 1781 1464203 - 1464184 - RH 81 -4.9 -5.24129 | overlap 1464185 TCTGGTGATAAAAAA TGCCTGC TAAACG GCAGGCG TCGCAATAATGTTTT TERM 1782 1464202 - 1464185 - RH 72 -8.4 -3.73995 | overlap 1464184 CTGGTGATAAAAAAT GCCTGC TAAACG GCAGGC GTCGCAATAATGTTT SBO_1487 1464789 - 1464190 - | hypothetical protein SBO_1486 1464754 - 1465131 + | hypothetical protein SBO_1488 1465180 - 1466076 + | hypothetical protein TERM 1783 1466430 - 1466403 - g 81 -11.2 -3.69902 | gap 1, opp_overlap 1466402 1466400, overlap 1466396 1466394 ACCAAAGATGGCAAA GCCAGCGCCGCGG AAT CCGCAG-GCGGGC ATCTTGATCCACAAA TERM 1784 1466641 - 1466631 - g 72 -8.2 -3.78329 | opp_overlap 1466637 TCCGATCAACCTAAA CCGC TGG GCGG TGGCGGTGAACGCTA sodC 1466157 - 1466678 + | superoxide dismutase SBO_1490 1468286 - 1466679 - | hypothetical protein TERM 1785 1466772 - 1466751 - G 73 -11.5 -2.6914 | opp_overlap 1466750 1466749, overlap 1466738 1466750 CAGCCGCCAGACAAT TGCCGCCAG CTCA CGGGCGGCA GGTTGATGATGACGG SBO_1491 1469590 - 1468691 - | hypothetical protein TERM 1786 1468882 - 1468896 + g 73 -4.2 -4.79955 | opp_overlap 1468882 GACCGATACTGGAAA CGTGAC CCT GTAACG TTTTGTTATCACTAT slyA 1469988 - 1470422 + | transcriptional regulator SlyA TERM 1787 1470429 - 1470464 + T 95 -11.8 -3.90744 | opp_overlap 1470425 1470417 1470429 AAAGGGTGAAATGAA GGGGGCGTGTGGTCAG TAAC CTGACCACACGCAAAC TTATTTAGCGCGGAG TERM 1788 1470464 - 1470429 - T 86 -11.8 -3.5332 | opp_overlap 1470429, overlap 1470425 1470417 AAAGGGTGAAATGAA GGGGGCGTGTGGTCAG TAAC CTGACCACACGCAAAC TTATTTAGCGCGGAG slyB 1470936 - 1470469 - | putative outer membrane protein TERM 1789 1472193 - 1472155 - g 100 -16.8 -3.51924 | opp_overlap 1472169 CTGCCAGGCACAGAA GTCACCACCACCGATGCC GTT GGCATTAGTGGCGATGAC ATGGAAGCATTGGCT anmK 1471210 - 1472319 + | anhydro-N-acetylmuramic acid kinase ydhA 1472498 - 1472746 + | hypothetical protein TERM 1790 1472877 - 1472862 - g 72 -7.5 -3.93262 | overlap 1472855 CGTGAATACACCAAA GGCGG GTTACG CCGCC GCGATCTTCCCGCCG TERM 1791 1473057 - 1473036 - g 81 -5.9 -4.78107 | gap 1, overlap 1473040 CATTACGACGAAAAA GGCATGGTGT TTT ACACCA-ACC TCGGCAGCCGTAAAG TERM 1792 1473382 - 1473407 + G 73 -4 -4.82901 | gap 1 TTGAGTTCTGGCAGG GCGGTGA-GCA TCGCC TGCATGACCGC TTTTTGTACCAGCGA pdxH 1472805 - 1473461 + | pyridoxamine 5'-phosphate oxidase TERM 1793 1474482 - 1474465 - g 84 -4.1 -5.21506 | gap 1, overlap 1474467 1474475 1474476 1474478 AGAAGAAGATAAAAA CAGCGGTA AAG CACCGC-G CGCCCAGTATGTACT TERM 1794 1474481 - 1474467 - g 76 -7.8 -4.20977 | overlap 1474465 1474475 1474476 1474478 AAGAAGATAAAAACA GCGGTA AAG CACCGC GCGCCCAGTATGTAC tyrS 1473590 - 1474864 + | tyrosyl-tRNA synthetase TERM 1795 1474877 - 1474906 + F 100 -10.7 -4.82901 | opp_overlap 1474880, overlap 1474878 1474880 TAATGCATTAAGTGG AAAGGGGGAGTGA GAAA TCACTCCCCCTGG TTTTTATACAGGGAA TERM 1796 1474878 - 1474905 + F 93 -14.2 -3.49419 | opp_overlap 1474880, overlap 1474877 1474880 AATGCATTAAGTGGA AAGGGGGAGTGA GAAA TCACTCCCCCTG GTTTTTATACAGGGA TERM 1797 1474880 - 1474903 + F 100 -16.8 -3.31915 | opp_overlap 1474880, overlap 1474878 1474877 TGCATTAAGTGGAAA GGGGGAGTGA GAAA TCACTCCCCC TGGTTTTTATACAGG TERM 1798 1474903 - 1474880 - f 100 -16.8 -3.67976 | opp_overlap 1474880 1474878 1474877 TGCATTAAGTGGAAA GGGGGAGTGA GAAA TCACTCCCCC TGGTTTTTATACAGG pdxY 1474923 - 1475786 + | pyridoxamine kinase gst 1476435 - 1475830 - | glutathionine S-transferase TERM 1799 1476145 - 1476155 + g 70 -5.4 -4.36914 | GGCGATGTAATTCAG CCAT TCG ATGG TTTTATAGCGGGAAA TERM 1800 1476318 - 1476330 + g 84 -4.1 -5.28481 | opp_overlap 1476312 CAAAGTAATCGTCAC CGTTT TCG AGACG TTTTTTCATTAAATC TERM 1801 1476517 - 1476495 - R 100 -13.5 -6.36459 | opp_overlap 1476495 CTGAACAAAAAAAAA GCCGCTAAC GAAAA GTTAGCGGC TTGTAAAAGAGTTTC TERM 1802 1476495 - 1476517 + r 86 -13.5 -3.30635 | opp_overlap 1476495 CTGAACAAAAAAAAA GCCGCTAAC GAAAA GTTAGCGGC TTGTAAAAGAGTTTC tppB 1478043 - 1476541 - | putative tripeptide transporter permease TERM 1803 1477007 - 1476972 - G 70 -11.2 -2.7924 | gap 1, opp_overlap 1477005, overlap 1476967 1476965 CACCAGAACACATCA CCATGCCGATTGCAAAC TTG GTTGGCA-TCGGCAGGG TATCGCCCATCTTGT TERM 1804 1477596 - 1477612 + g 76 -3.5 -4.91511 | opp_overlap 1477584 ACATGGTGAATGCAC CGTCCAG ACG CGGGTCG TTTTTCTCATAGCAT TERM 1805 1477991 - 1478018 + g 74 -8.6 -3.90592 | gap 1, opp_overlap 1477978 1477975 1477997 1478006, overlap 1477984 1477992 1478002 AACGCCTTCGGTTGT TTGAAAGCGTTCA AAC TGA-CGCTTTCAG TTGGTTTTTGGTTTG TERM 1806 1478002 - 1478022 + g 76 -4 -4.99134 | opp_overlap 1477997 1478006, overlap 1477984 1477992 1477991 TTGTTTGAAAGCGTT CAAACTGA CGCTT TCAGTTGG TTTTTGGTTTGCAGT TERM 1807 1478629 - 1478648 + r 84 -8.6 -4.66987 | opp_overlap 1478629 1478628 AGAAAGGTTATCAAT GGGGTAAT CGGT GTTACCCC TTTTCTTCAGATGTC nth 1479290 - 1478655 - | endonuclease III ydgQ 1479985 - 1479290 - | SoxR-reducing system protein RsxE TERM 1808 1479577 - 1479563 - G 72 -11.4 -2.50195 | overlap 1479553 1479562 1479560 ACCCAGCACGAACAT GGCGCA GGT TGCGCC CATACCAATTGAAAA TERM 1809 1479595 - 1479619 + g 74 -3.4 -5.00616 | opp_overlap 1479595, overlap 1479596 TACCAATTGAAAAGC CGTCCAGTGC CGAAA GCGCCGGACC TTTTTTGGCGGCGAA SBO_1503 1480609 - 1479989 - | electron transport complex protein RnfG rnfD 1481671 - 1480613 - | electron transport complex protein RnfD TERM 1810 1480790 - 1480771 - G 70 -6.4 -4.17048 | overlap 1480773 1480776 GCGCGCCGAAAATAA GACGACCA CGAT TGGTCGTA GAAGCGGTAACCGGG TERM 1811 1480788 - 1480773 - G 73 -9 -3.68435 | overlap 1480771 1480776 GCGCCGAAAATAAGA CGACCA CGAT TGGTCG TAGAAGCGGTAACCG TERM 1812 1481577 - 1481561 - G 79 -2.2 -5.27477 | opp_overlap 1481567, overlap 1481562 ACCCCAACCAAAAAA CCACAG TTGCG CTGCGA TTCCTGGCACGGCTG SBO_1505 1483894 - 1481672 - | electron transport complex protein RnfC TERM 1813 1481733 - 1481746 + g 71 -9.5 -3.54424 | opp_overlap 1481730 GCGCGGGCAATAGCC GCGGC AACT GCCGC TTTGCGCGGATCAAC TERM 1814 1483381 - 1483395 + g 72 -8.6 -3.80142 | GCTCGCACTCAGCCG CGTTGA TAA TCAACG TTTCAATCTTATCTC TERM 1815 1483797 - 1483770 - G 100 -12.7 -4.90079 | opp_overlap 1483776, overlap 1483772 AGTGGAATAACAAAA CGCTGCGCCAG TGGTAC CTGGCGCAGGG GGGTACCGTTGGACT TERM 1816 1483795 - 1483772 - G 85 -13.9 -2.71055 | opp_overlap 1483776, overlap 1483770 TGGAATAACAAAACG CTGCGCCAG TGGTAC CTGGCGCAG GGGGGTACCGTTGGA TERM 1817 1483846 - 1483862 + g 87 -4.5 -5.28176 | overlap 1483811 GATGGATGCCGCCGT TGAAATC CCA GATTTTA TTTTTTCTGAATGCA SBO_1506 1484465 - 1483887 - | electron transport complex protein RnfB SBO_1507 1485046 - 1484465 - | Na(+)-translocating NADH-quinone reductase subunit E SBO_1508 1485587 - 1485123 - | hypothetical protein TERM 1818 1485525 - 1485506 - G 75 -7 -4.3014 | overlap 1485510 ACAGAGCGACTAAAA GCCAGGCC AACG GGCCAAGC AACCAGCCTCCAATA SBO_1509 1485864 - 1485649 - | oriC-binding nucleoid-associated protein SBO_1510 1486475 - 1487515 + | putative oxidoreductase TERM 1819 1487515 - 1487549 + T 100 -17.4 -3.33696 | opp_overlap 1487520, overlap 1487520 TTTGTGCCTTGCATG AAAAATGGATGGTGCA ATT TGCACCATCCATTTTG TTACTTCGCGGCGAC TERM 1820 1487520 - 1487544 + T 100 -17.3 -4.78572 | opp_overlap 1487520, overlap 1487515 GCCTTGCATGAAAAA TGGATGGTGCA ATT TGCACCATCCA TTTTGTTACTTCGCG TERM 1821 1487544 - 1487520 - T 100 -17.3 -4.72272 | opp_overlap 1487520 1487515 GCCTTGCATGAAAAA TGGATGGTGCA ATT TGCACCATCCA TTTTGTTACTTCGCG TERM 1822 1487570 - 1487582 + T 72 -4.7 -4.7254 | overlap 1487581 TCGCGGCGACTTTTT CTCGC AGT GCGCG TTTTTCCTCAGCGCT add 1488551 - 1487550 - | adenosine deaminase TERM 1823 1488274 - 1488294 + g 74 -11.1 -3.20387 | opp_overlap 1488273, overlap 1488273 CGCAGCTCGACATAG TGCAGGCCG TTA CGGGCTGCA TCTTCAATGTTTTCA TERM 1824 1488654 - 1488614 - R 93 -9.7 -4.652 | overlap 1488615 AAAGCAGGGTAAAAA TCCACGATTGCGCAACG ATTTTTA CGTTGCGCAATTGGGGT TAACGAACAGCGCGG TERM 1825 1488653 - 1488615 - R 86 -13.2 -3.38036 | overlap 1488614 AAGCAGGGTAAAAAT CCACGATTGCGCAACG ATTTTTA CGTTGCGCAATTGGGG TTAACGAACAGCGCG malY 1489826 - 1488654 - | MalY TERM 1826 1489667 - 1489683 + g 86 -13.7 -2.94099 | opp_overlap 1489655 1489656, overlap 1489659 ATACGCCGTGCATCA GGCGCTG ATT CAGCGCC TCTATAATGCAGGGG malX 1491428 - 1489836 - | bifunctional maltose and glucose-specific PTS system components IICB TERM 1827 1490994 - 1490963 - G 74 -10.2 -3.47573 | gap 1 GCATCCAGACGATAA TACCGGCGATCACCG CAC CGAGGATC-CCGGTA TCGATCGACTGGATC TERM 1828 1491061 - 1491071 + g 72 -6.8 -4.24342 | overlap 1491034 GCGGCATCCGTGGTT GGCA GAA TGCC TTTATTGGTCAACCA malI 1491603 - 1492631 + | DNA-binding transcriptional repressor MalI TERM 1829 1492700 - 1492690 - f 85 -5.4 -5.37345 | GTTAATGATAAAAAA TGTG GCA CACA GGCGGTGTAATGCCG TERM 1830 1492784 - 1492759 - f 72 -9.1 -3.61398 | opp_overlap 1492759 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 1831 1492759 - 1492784 + F 100 -9.8 -5.61596 | opp_overlap 1492759 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SBO_1515 1492774 - 1493364 + | IS4 orf SBO_1516 1493483 - 1494121 + | IS4 orf TERM 1832 1494132 - 1494103 - f 89 -9.3 -4.59109 | overlap 1494105 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACACAGGCGGTG TERM 1833 1494130 - 1494105 - f 100 -16.3 -3.90762 | overlap 1494103 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACACAGGCGG TERM 1834 1494360 - 1494379 + G 71 -9.2 -3.54602 | overlap 1494361 ATTCAACAACTGGGG GGGCAGGC ATTT GCCTGCCG TTGTGATATTACTTC TERM 1835 1494361 - 1494378 + G 77 -12.7 -2.72038 | overlap 1494360 TTCAACAACTGGGGG GGCAGGC ATTT GCCTGCC GTTGTGATATTACTT hdhA 1494183 - 1494950 + | 7-alpha-hydroxysteroid dehydrogenase TERM 1836 1494993 - 1494963 - f 73 -9.8 -3.456 | opp_overlap 1494964 TAATACACTAACGAA CCGGTAAACAGC CGTATGT GTTGTTTACCGG GATAGCGTGTGCAAT TERM 1837 1495070 - 1495047 - f 70 -9.6 -2.94144 | overlap 1495044 CTGGCAGCCAAATCA CGGCTATTGG TTAA CCAATAGCTG GATGAAAAGCATACG uidR 1495179 - 1495769 + | repressor for uid operon TERM 1838 1495781 - 1495807 + F 74 -8.7 -3.90684 | gap 1 CTGATCCTCTCATTT CGCGGGC-TGGT GATA ACTGTGCCCGCG TTTCATACTTTAATT TERM 1839 1496303 - 1496281 - f 72 -6.2 -4.30719 | opp_overlap 1496280 GCGCGTTACAAGAAA GCCGGGCA ATTGCTG TGCCAGGC AGTTTTAACGATCAG TERM 1840 1497361 - 1497348 - f 71 -3.8 -4.83169 | opp_overlap 1497348, overlap 1497349 AGCGCGTGACAAAAA CCAC CCAAGC GTGG TGATGTGGAGTATTG TERM 1841 1498408 - 1498374 - g 100 -14.3 -3.69395 | gap 1, opp_overlap 1498374 1498398 GCGATGACCCAACAA CCACAATCCCGCGCCC GTCT GGGCGCG-GCTCGTGG GATTGCCGCTTCATT uidB 1497954 - 1499327 + | glucuronide transporter uidC 1499366 - 1500631 + | putative outer membrane porin protein TERM 1842 1500665 - 1500636 - T 87 -10 -4.3255 | opp_overlap 1500639, overlap 1500639 TGCTGAAGTAAGAAA TAACGCCGGAGA GAAAAA CCTCCGGCGTTT CAGATTGTTGACAAA TERM 1843 1500639 - 1500662 + T 86 -11 -3.72051 | opp_overlap 1500636 1500639 TGAAGTAAGAAATAA CGCCGGAG AGAAAAAC CTCCGGCG TTTCAGATTGTTGAC TERM 1844 1500662 - 1500639 - T 95 -11.7 -4.27694 | opp_overlap 1500639, overlap 1500636 TGAAGTAAGAAATAA CGCCGGAGA GAAAAA CCTCCGGCG TTTCAGATTGTTGAC TERM 1845 1500843 - 1500820 - T 76 -7.4 -4.34402 | opp_overlap 1500820 1500839 GTTTTCAGATGAAAA CGCCGAAG TGAAAATT CTCCGGCG TTTTGGCCGTGAATT ydgA 1502365 - 1500857 - | hypothetical protein TERM 1846 1501189 - 1501207 + g 74 -8.1 -4.04927 | gap 1 AACGATCTACTTCCT GCGCCAGC GTTT GC-GGCGC TTCTTTAGTCGTTGC TERM 1847 1501838 - 1501855 + g 73 -4 -4.86773 | overlap 1501836 1501840 ATTTAACTGGAACTC GCCGCC GCTAAA GGCGAC TTTTTCATCCTTTTG TERM 1848 1502408 - 1502388 - R 95 -12.6 -4.27483 | opp_overlap 1502386 1502385 1502402 ATCCATAAAATGAAA TCAGGCGG ACTGG CCGCCTGA AGGTGTTATAAGCCT manA 1503641 - 1502466 - | mannose-6-phosphate isomerase TERM 1849 1503431 - 1503392 - G 95 -15.2 -3.06583 | gap 1, opp_overlap 1503383, overlap 1503397 ATAATACTTTGAACA GGAAAGGCAGTTCGCCAAA GCG TTTGGC-AACGGCCTCTCC GAGCAGAGTCGATTT TERM 1850 1503426 - 1503397 - G 81 -10.1 -3.92592 | gap 1, opp_overlap 1503383, overlap 1503392 ACTTTGAACAGGAAA GGCAGTTCGCCAAA GCG TTTGGC-AACGGCC TCTCCGAGCAGAGTC TERM 1851 1503906 - 1503888 - g 74 -2.4 -5.08824 | TTTCCACTCAAAAAA GATGATAC TGA GTATTACC TGCTAACCAGCGAAC TERM 1852 1503988 - 1504016 + G 72 -7.4 -3.97947 | overlap 1503967 AAGCGTTAACTCTGT TGGCGCGTCAGG CGTTT CATGATGCGTCA TTTATGCTGCGTCCG TERM 1853 1504452 - 1504440 - g 74 -7.7 -4.11623 | TATCAGGAAACCAAA GCGTT ACT AACGC CGGGGAAACTGAAAA TERM 1854 1504866 - 1504851 - g 72 -4.7 -4.66163 | ATCTGGATCGAAAAA CTGGA ACATAA TCCAG GTAAATATATCCCTG fumA 1503840 - 1505486 + | fumarase A TERM 1855 1505493 - 1505508 + F 100 -11.8 -5.47218 | opp_overlap 1505492 1505490 1505488 1505493 GTGAAATAAACAGAG CCGCCC TTCG GGGCGG TTTTTTTACATGGCA TERM 1856 1505508 - 1505493 - f 76 -11.8 -2.68607 | opp_overlap 1505493, overlap 1505492 1505490 1505488 GTGAAATAAACAGAG CCGCCC TTCG GGGCGG TTTTTTTACATGGCA TERM 1857 1506512 - 1506543 + G 76 -12.2 -2.50443 | gap 1, opp_overlap 1506510, overlap 1506511 AAATCGCCAATGATG TCCGCTG-GCTGGCC TCT GGCCCGCGCTGCGGA ATTGGTGAAATCTCA fumC 1505629 - 1507032 + | fumarate hydratase tus 1507958 - 1507029 - | DNA replication terminus site-binding protein rstB 1509335 - 1508034 - | sensor protein RstB rstA 1510067 - 1509339 - | DNA-binding transcriptional regulator RstA ydgC 1510211 - 1510507 + | hypothetical protein ydgB 1511226 - 1510504 - | short chain dehydrogenase TERM 1858 1510570 - 1510590 + g 77 -8.3 -4.06419 | opp_overlap 1510559 1510570 1510574 GCAACTGGTAAGTAA GTAATCGAC CAG GTCGATCAC TTCTTTCTCGCCAGG TERM 1859 1510590 - 1510570 - G 76 -10.5 -3.35867 | opp_overlap 1510570, overlap 1510559 1510574 GCAACTGGTAAGTAA GTAATCGAC CAG GTCGATCAC TTCTTTCTCGCCAGG TERM 1860 1510985 - 1511003 + g 75 -4.5 -4.81685 | opp_overlap 1510985, overlap 1511000 GCGTTATGCAAAATA GCACGCA GACCA TGGGTGC TTTTTAGTACTTCAT SBO_1531 1512645 - 1511263 - | putative arginine/ornithine antiporter TERM 1861 1512232 - 1512220 - G 73 -4.1 -4.77036 | GCGCAGGATCAAAAA GTGAA CAA TCCAC AATAAAGCCGATGCA TERM 1862 1512794 - 1512810 + r 77 -10.8 -3.31461 | opp_overlap 1512787 1512794 ACTAAAAATGCGAAA GGCGGC ATCAA GCCGCC TTATAGGAGTAACTG TERM 1863 1512810 - 1512794 - R 83 -10.8 -3.81062 | opp_overlap 1512794, overlap 1512787 ACTAAAAATGCGAAA GGCGGC ATCAA GCCGCC TTATAGGAGTAACTG SBO_1532 1513775 - 1512831 - | hypothetical protein TERM 1864 1512865 - 1512900 + g 73 -12 -2.72855 | gap 1, overlap 1512855 CTGACGGTCAGGTTA TTACCACGTT-CCTGCC ACT GGCGGGTGATGTGGTAA TACTTAGCACCTTTC pntA 1514299 - 1515831 + | NAD(P) transhydrogenase subunit alpha pntB 1515842 - 1517230 + | pyridine nucleotide transhydrogenase TERM 1865 1517233 - 1517258 + T 95 -13.3 -3.69068 | overlap 1517231 1517234 GAAAGCTCTGTAACC CTGACGGCCTC TGCG GAGGCCGTCAC TCTTTATTGAGATCG TERM 1866 1517234 - 1517257 + T 100 -16.8 -2.80958 | overlap 1517233 1517231 AAAGCTCTGTAACCC TGACGGCCTC TGCG GAGGCCGTCA CTCTTTATTGAGATC tqsA 1518289 - 1517255 - | putative transport protein TERM 1867 1517420 - 1517405 - G 74 -3.2 -5.00765 | overlap 1517407 1517414 AATCAACGACAAAAA TACCAC CAAT GTGGAA AGCCCCAGCCCACGT TERM 1868 1518579 - 1518589 + H 74 -8.2 -3.92804 | overlap 1518578 AGGTGAGCAGCACTG GCGC AAC GCGC TTTAGTCCTTTCTTC SBO_1536 1518701 - 1519066 + | multidrug efflux system protein MdtJ SBO_1537 1519053 - 1519382 + | multidrug efflux system protein MdtI TERM 1869 1519380 - 1519420 + T 86 -9.1 -4.40561 | gap 1, opp_overlap 1519387 1519389, overlap 1519380 1519389 ATGGTGAAACTTGCC TGATGAACACGCTGCCCG CACAGT CGGGCAGCGT-TTGAACA TTATTTTTGCGACAG TERM 1870 1519414 - 1519387 - T 81 -12.7 -3.14463 | opp_overlap 1519380 1519380 1519389, overlap 1519389 AACTTGCCTGATGAA CACGCTGCCCG CACAGT CGGGCAGCGTT TGAACATTATTTTTG TERM 1871 1519389 - 1519412 + T 100 -15.3 -3.65722 | opp_overlap 1519389 1519387, overlap 1519380 1519380 CTTGCCTGATGAACA CGCTGCCCG CACAGT CGGGCAGCG TTTGAACATTATTTT TERM 1872 1519412 - 1519389 - T 100 -15.3 -3.13403 | opp_overlap 1519380 1519380 1519389, overlap 1519387 CTTGCCTGATGAACA CGCTGCCCG CACAGT CGGGCAGCG TTTGAACATTATTTT SBO_1538 1520242 - 1519421 - | hypothetical protein TERM 1873 1520473 - 1520443 - R 76 -11.9 -2.71924 | opp_overlap 1520441 1520444, overlap 1520442 TACCCTCCGCTAAAG GCGGTGCTAAACG TTACC CGCTTAGCACCGT AATTTTCAGGCGCGA TERM 1874 1520444 - 1520472 + r 82 -13.2 -3.08032 | opp_overlap 1520443 1520442, overlap 1520441 ACCCTCCGCTAAAGG CGGTGCTAAACG TTACC CGCTTAGCACCG TAATTTTCAGGCGCG asr 1520805 - 1520518 - | acid shock protein precursor TERM 1875 1520666 - 1520676 + g 72 -6.8 -4.17477 | overlap 1520648 1520646 GCCTGCGCTTTCTGG GCAG GTG CTGC TTTATGCTGTTTTTT TERM 1876 1521189 - 1521224 + H 93 -9.8 -4.58395 | gap 1, opp_overlap 1521189 1521192 GGTTTGAGCAAGCAA TAAGTCCGGACGTGTAG TTA CCGCA-GTCCGGGCTTA TTTTTCAGGCGTGCA TERM 1877 1522645 - 1522670 + G 76 -11.1 -3.34398 | overlap 1522644 GCGGAAGAGCTGCAT TTCGGGCGCGC CGCT GCCCGCCTGAA TATTTCGCAACCACC TERM 1878 1523154 - 1523172 + G 83 -5.2 -5.14563 | AACGTTGGCTGAACT GGCGAAAG AAC CCTTCGTC TTTTTTGATCCGCAC ynfL 1522588 - 1523481 + | putative transcriptional regulator LYSR-type TERM 1879 1524173 - 1524138 - g 72 -6.8 -4.21908 | gap 1, opp_overlap 1524172, overlap 1524142 1524172 TACGAGGATGTAAAA GAGATGCCGCT-CGGCG AGG CGCTGGAGCAGCATACC GGCGTACCGGTTTAT TERM 1880 1524172 - 1524183 + G 72 -7.2 -4.19624 | opp_overlap 1524138 1524172 CGCTGGAGCAGCATA CCGG CGTA CCGG TTTATATTCAGCATG mlc 1523616 - 1524836 + | putative NAGC-like transcriptional regulator SBO_1543 1524961 - 1525656 + | putative dithiobiotin synthetase SBO_1544 1526865 - 1525609 - | putative voltage-gated ClC-type chloride channel ClcB TERM 1881 1525697 - 1525727 + g 77 -9.7 -3.64599 | opp_overlap 1525700, overlap 1525700 ACGCAGGCAATCAAT AAACCGGGGAGTA GCTGA TACTCCCCGGTCA TTTCACATATCATCA TERM 1882 1525724 - 1525700 - G 100 -15.8 -4.33621 | opp_overlap 1525697 1525700 CAGGCAATCAATAAA CCGGGGAGTA GCTGA TACTCCCCGG TCATTTCACATATCA TERM 1883 1525700 - 1525724 + g 95 -15.8 -2.93585 | opp_overlap 1525700, overlap 1525697 CAGGCAATCAATAAA CCGGGGAGTA GCTGA TACTCCCCGG TCATTTCACATATCA TERM 1884 1526552 - 1526517 - G 70 -10.4 -3.14344 | opp_overlap 1526514 CACCTTCGCGACCAA TTGCACTGCCGCTGGT TACT ACCAGCAGCGAGGCAA GCGATTTAACCAGGC TERM 1885 1527083 - 1527071 - R 70 -9.1 -3.41073 | overlap 1527069 GATCCTATCGAAACA GCGGT TTA ACCGC GACAGGAATTAACAG SBO_1545 1527674 - 1527060 - | twin-argninine leader-binding protein DmsD TERM 1886 1527205 - 1527193 - G 75 -4.8 -4.82518 | AAAACATCAAGAAAA CGTG TTGAC CACG GAAAAAGGTGCCATG TERM 1887 1527524 - 1527499 - G 70 -6.9 -4.07885 | gap 1, opp_overlap 1527500 1527501, overlap 1527500 CACTGTGTCTGAAAA GCCGTCACCAGC GGC GCTAATGACG-C TTCTGGTAGAGGCCA TERM 1888 1527599 - 1527578 - G 70 -10.9 -2.74012 | gap 1, opp_overlap 1527581, overlap 1527580 TGAGTACCGCAACCA GAG-GTGCGG CTT CCGCACTCTC TGGAGCGTAATAAAA TERM 1889 1527581 - 1527595 + g 75 -11.4 -2.8805 | opp_overlap 1527580 1527578 GTACCGCAACCAGAG GTGCGG CTT CCGCAC TCTCTGGAGCGTAAT TERM 1890 1527637 - 1527615 - G 95 -9.8 -4.65916 | overlap 1527629 TGGAGCGTAATAAAA CAGCGCGC CCAACAC GCGCGCCG CGACAGAAAAATTAT TERM 1891 1527710 - 1527691 - R 72 -9.2 -3.6106 | opp_overlap 1527690 1527691, overlap 1527692 CCTAACATCCTGAAA TGTGCGGG TTGC CCCGCACC AATTTGTTAACCTGC TERM 1892 1527709 - 1527692 - R 79 -12.7 -2.76315 | opp_overlap 1527691 1527690, overlap 1527691 CTAACATCCTGAAAT GTGCGGG TTGC CCCGCAC CAATTTGTTAACCTG SBO_1546 1528571 - 1527717 - | putative DMSO reductase anchor subunit TERM 1893 1528207 - 1528193 - G 78 -7.8 -4.3586 | TCATCCAGACGAAAA TGACGC CGA GCGCCA TGCTGACAAGTAACC TERM 1894 1528450 - 1528464 + g 72 -5.7 -4.56597 | opp_overlap 1528447 1528445, overlap 1528447 CCACGGACAATACGC TGACG GTCTG CGTCA TTTTTGGCGGCGAAC SBO_1547 1529028 - 1529936 + | insertion element IS2 transposase InsD SBO_1548 1532966 - 1530540 - | putative oxidoreductase, major subunit TERM 1895 1530971 - 1530986 + g 86 -6.2 -5.15969 | TATACGCAGGAAGGG GATGAA TAAT TTCATC TTTTTTCAATTCCCA TERM 1896 1531092 - 1531124 + g 85 -2.8 -5.45652 | overlap 1531118 TGGATCTTCACGGAA TGCGCGGAA-AGCGAC GTA GT-GTTCTTCCGGGCA TTTTTTCTTAAAGAT TERM 1897 1531569 - 1531586 + g 86 -4.1 -5.45802 | opp_overlap 1531569, overlap 1531563 GTAGCACCATAAAAA CTTGATG GGGA CATCCAG TTTTTCTTTTCCACG TERM 1898 1531586 - 1531569 - G 76 -4.1 -4.93296 | opp_overlap 1531569 1531563 GTAGCACCATAAAAA CTTGATG GGGA CATCCAG TTTTTCTTTTCCACG TERM 1899 1532006 - 1532020 + g 84 -3.5 -5.1861 | GCGCGTTACGTGGTG CGTTG GCGGG CAGCG TTTTTTCATCGTAAC TERM 1900 1533602 - 1533628 + H 82 -3.1 -5.54192 | gap 1 CGACAAAATGGCCAT TGGG-ATCTTTA CGCT TATAGATACCCA TTTTTTTCAGTTCGT SBO_1549 1533944 - 1534219 + | IS629 ORF1 TERM 1901 1534539 - 1534527 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_1550 1534219 - 1535106 + | IS629 ORF2 TERM 1902 1535984 - 1536003 + T 74 -5.6 -4.57073 | ATAACAATCATTTTG GCGTTCGA TTTC TCGCGCGC TTTTTCAAGAAGATA TERM 1903 1536930 - 1536908 - T 76 -12 -2.74144 | opp_overlap 1536908, overlap 1536907 GTTGTATGTTCAAAT CGCCGGATGT GTC ATATCCGGCG TTCAGTCGATAATGT TERM 1904 1536908 - 1536930 + T 85 -14.2 -3.08642 | opp_overlap 1536908 1536907 GTTGTATGTTCAAAT CGCCGGATGT GTC ATATCCGGCG TTCAGTCGATAATGT SBO_1552 1537294 - 1536974 - | hypothetical protein ynfC 1537360 - 1538070 + | hypothetical protein TERM 1905 1538900 - 1538911 + F 74 -5.8 -4.63218 | opp_overlap 1538896 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 1906 1539964 - 1539927 - f 71 -3.4 -4.74103 | gap 1, overlap 1539946 TGCGTAATGGAAAAA TACTGGCTAC-GGGAGA AAATG TCTCCCTGGGGACAGTA AATAAAAGCAAAGTA TERM 1907 1540317 - 1540298 - f 72 -5 -4.58297 | opp_overlap 1540300, overlap 1540300 GATTAAAAATAGAAA GAGAGTAG TCCC CTACTCTT ATATATCCATGTTGG TERM 1908 1540315 - 1540300 - f 71 -7.6 -3.87576 | opp_overlap 1540300, overlap 1540298 TTAAAAATAGAAAGA GAGTAG TCCC CTACTC TTATATATCCATGTT SBO_1555 1540409 - 1542688 + | putative oxidoreductase TERM 1909 1542702 - 1542732 + F 95 -12.8 -4.07306 | AATTCGCCTCCTCAT TTCTTCTGCTGT CATCCGC ACAGCAGAAGAA TTTCTCATTGACTAT SBO_1556 1542936 - 1543133 + | hypothetical protein SBO_1557 1543208 - 1543969 + | transcriptional regulator YdeO SBO_1558 1544371 - 1546053 + | putative sulfatase TERM 1910 1546065 - 1546086 + F 82 -11.5 -3.61715 | opp_overlap 1546059, overlap 1546066 ATAACTAAACCTTCA TGCGGCGGA ATTT TCCGCCGCC TTATTGAGCGAGATA TERM 1911 1546066 - 1546085 + F 93 -15 -2.76815 | opp_overlap 1546059, overlap 1546065 TAACTAAACCTTCAT GCGGCGGA ATTT TCCGCCGC CTTATTGAGCGAGAT SBO_1559 1546090 - 1547262 + | putative enzyme TERM 1912 1547316 - 1547341 + F 83 -10.5 -3.80841 | opp_overlap 1547315 1547314 1547318 ATGACCTTAACAAGG CACCCGACA TAAATTCC TGTCGGGTG TTTCGTCATCATCAT TERM 1913 1547788 - 1547810 + F 76 -7.6 -4.2586 | GGCAGCTTGTTCTTT GGTTCCCTGC CCT GCTGGGGATC TTTGTATTAATATCC TERM 1914 1551033 - 1551017 - g 78 -7.9 -4.39989 | ATCAAATCAGCAAAA GCAGTCG TAC CGACAGC GCGACTAAAACCACC yddB 1549282 - 1551654 + | hypothetical protein TERM 1915 1552246 - 1552224 - g 81 -11.2 -3.62572 | opp_overlap 1552237 1552238, overlap 1552225 CATCAGGATGCGAAA TGGCGCACCT CTC AGGCGCGCCG CCCTTTCCTGCTGGC TERM 1916 1552245 - 1552225 - g 90 -14.7 -2.77222 | opp_overlap 1552237 1552238, overlap 1552224 ATCAGGATGCGAAAT GGCGCACCT CTC AGGCGCGCC GCCCTTTCCTGCTGG TERM 1917 1553666 - 1553647 - g 74 -7.8 -4.08767 | overlap 1553633 1553632 TTCAGGCGTTGAAAA CGCTCGAC CAGC GTCCAGCG GAGAAATTCGCCCAG TERM 1918 1553984 - 1553963 - g 90 -6.7 -5.093 | gap 1, opp_overlap 1553967, overlap 1553967 TGTAAAAGAACAAAA TGA-ACCTGT GGC ACAGGTTTCA CAGTGGAAGCGTTAT TERM 1919 1553979 - 1553967 - g 72 -7.7 -3.89307 | opp_overlap 1553967, overlap 1553963 AAAGAACAAAATGAA CCTGT GGC ACAGG TTTCACAGTGGAAGC pqqL 1551699 - 1554494 + | putative peptidase TERM 1920 1554531 - 1554495 - f 76 -8.7 -4.18506 | opp_overlap 1554500 1554501 1554530, overlap 1554498 1554501 TTATTGCCAAAATAA TAACAGCCCCGTCAACA CAT CGTTGGCGGGGATTTTA GCAATATTCGCTATT TERM 1921 1554500 - 1554526 + F 83 -10.1 -4.14472 | opp_overlap 1554498 1554495 1554501, overlap 1554501 GCCAAAATAATAACA GCCCCGTCAAC ACATC GTTGGCGGGGA TTTTAGCAATATTCG TERM 1922 1554501 - 1554525 + F 85 -13.6 -3.08201 | opp_overlap 1554498 1554495 1554501, overlap 1554500 CCAAAATAATAACAG CCCCGTCAAC ACATC GTTGGCGGGG ATTTTAGCAATATTC TERM 1923 1554525 - 1554501 - f 77 -12.1 -2.80636 | opp_overlap 1554501 1554500, overlap 1554498 1554495 CCAAAATAATAACAG CCCCGTCAACA CAT CGTTGGCGGGG ATTTTAGCAATATTC TERM 1924 1554530 - 1554544 + F 72 -2.8 -5.01497 | opp_overlap 1554495 CGTTGGCGGGGATTT TAGCAA TAT TCGCTA TTTTTATGTAATAAT gadB 1554856 - 1556256 + | glutamate decarboxylase isozyme TERM 1925 1556275 - 1556304 + F 100 -15.1 -3.57387 | opp_overlap 1556286 1556290, overlap 1556276 CGTTTAACGGTAACG GTGTCCCGAAACG AACC CGTTTCGGGACAA TTTCCAAAGTCTGTT TERM 1926 1556276 - 1556303 + F 100 -18.6 -2.7395 | opp_overlap 1556286 1556290, overlap 1556275 GTTTAACGGTAACGG TGTCCCGAAACG AACC CGTTTCGGGACA ATTTCCAAAGTCTGT TERM 1927 1556370 - 1556342 - f 76 -7.6 -4.30416 | overlap 1556344 ATTAGCAACGGAAAA TATTGTTCTGAA TACGC TTCAGAACAAAA CAGGTGCGGTTCCGA TERM 1928 1556368 - 1556344 - f 83 -10.2 -3.75051 | overlap 1556342 TAGCAACGGAAAATA TTGTTCTGAA TACGC TTCAGAACAA AACAGGTGCGGTTCC TERM 1929 1556545 - 1556562 + G 75 -5.5 -4.67256 | TTTCATTAGTCTTCT TCCTGCT ATTA GGCGGGA TTTTATGGTTTATTC TERM 1930 1557393 - 1557380 - g 71 -3.1 -4.8667 | gap 1, opp_overlap 1557385, overlap 1557381 1557382 CACAGCGCAGAAAAA CCTGCT GCC AGC-GG CATTCGCTAAAATGA xasA 1556412 - 1557947 + | acid sensitivity protein, putative transporter TERM 1931 1557973 - 1557995 + F 100 -13.5 -4.81685 | opp_overlap 1557973 ATGGTTATAAGACAA GGGAGCGAT AATTC ATCGCTCCC TTTTTCGTGCTTGCT TERM 1932 1557995 - 1557973 - f 100 -14.2 -3.75378 | opp_overlap 1557973 ATGGTTATAAGACAA GGGAGCGATA ATT CATCGCTCCC TTTTTCGTGCTTGCT SBO_1565 1558078 - 1559397 + | hypothetical protein TERM 1933 1559412 - 1559452 + F 85 -12.7 -3.34962 | opp_overlap 1559422, overlap 1559413 1559422 AACTCCCATGCTTAC TTTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACACC TTGTGAAATATCCCA TERM 1934 1559413 - 1559451 + F 90 -16.2 -2.60763 | opp_overlap 1559422, overlap 1559412 1559422 ACTCCCATGCTTACT TTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACAC CTTGTGAAATATCCC TERM 1935 1559442 - 1559422 - f 75 -9.7 -3.62597 | opp_overlap 1559422 1559413 1559412 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 1936 1559422 - 1559442 + F 79 -9.7 -3.66028 | opp_overlap 1559422, overlap 1559413 1559412 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 1937 1559715 - 1559725 + F 77 -6.8 -4.44548 | GCAGTTAGTCGATCT CGCA CGT TGCG TTTTGATTCCGTCTG TERM 1938 1559837 - 1559796 - g 70 -5.9 -4.20834 | gap 1, opp_overlap 1559798, overlap 1559798 TTTAAAAGAATGAAA GATGAGTGGACCGGACTTGT CGA ACAGG-CAGATCCACTCATT CGTGCTAAAGCCGCG SBO_1566 1559769 - 1560491 + | hypothetical protein SBO_1567 1560524 - 1561150 + | hypothetical protein TERM 1939 1561198 - 1561211 + G 90 -4.5 -5.40072 | opp_overlap 1561198 AACCGATGCGGAAAA TGCCG CCGA TGGCA TTTTTTTCCCCGCCC TERM 1940 1563348 - 1563330 - g 70 -4.6 -4.5852 | opp_overlap 1563330, overlap 1563332 1563339 TAACGGAAATCAAAA TTGACAAA AGT TTTGTCGA TCGTTGTCTGACCGA SBO_1568 1561151 - 1563574 + | cAMP phosphodiesterase TERM 1941 1563588 - 1563601 + F 93 -9.5 -4.55798 | GACAAATTCCTCTCG CCCGC ACTC GCGGG TTTTCATTTAACGTG SBO_1569 1563832 - 1564413 + | D-alanyl-D-alanine dipeptidase SBO_1570 1564427 - 1565977 + | putative hemin-binding lipoprotein TERM 1942 1566683 - 1566726 + G 71 -3 -4.73682 | gap 1, overlap 1566687 1566689 ATTGAGTGAAGACTA CATTCGTACCGCCCGGGCCAG CGG CTTGCCCGGCTGGTAT-ATCG TTTTATGTTATGCGC TERM 1943 1566689 - 1566721 + G 89 -14.1 -3.18381 | overlap 1566687 1566683 TGAAGACTACATTCG TACCGCCCGGGCCAG CGG CTTGCCCGGCTGGTA TATCGTTTTATGTTA SBO_1571 1565979 - 1567001 + | putative transport system permease protein TERM 1944 1567451 - 1567461 + G 75 -6.8 -4.41616 | GCACTGGCTGCCGCT CTCG GGC CGAG TTTATTTAACGCCAT SBO_1572 1566998 - 1567894 + | ATP-dependent peptide transporter membrane subunit SBO_1573 1567891 - 1568877 + | putative ATP-binding component of a transport system TERM 1945 1569680 - 1569690 + G 79 -2.4 -5.24129 | opp_overlap 1569670 GGAAACCGCACGTTG CCGC AAG GCTG TTTTTTCTACGAACG SBO_1574 1568870 - 1569796 + | putative ATP-binding component of a transport system osmC 1570283 - 1569852 - | osmotically inducible protein SBO_1576 1570629 - 1570844 + | biofilm-dependent modulation protein rpsV 1570946 - 1571083 + | 30S ribosomal subunit S22 TERM 1946 1571137 - 1571116 - f 95 -13.1 -3.82031 | opp_overlap 1571116 TCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTGTTTTTATCT TERM 1947 1571116 - 1571137 + F 100 -13.1 -5.71295 | opp_overlap 1571116 TCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTGTTTTTATCT TERM 1948 1571604 - 1571614 + G 72 -6.8 -4.2074 | overlap 1571597 AGATCTACCGCCGTT CACG CGG CGTG TTTATCTCTTACCAG TERM 1949 1572023 - 1571995 - g 95 -6.8 -5.40072 | gap 1 CTTTGCTCAAAAAAA TGCGAT-GCCGTT ACTT AACCGCTATCGCA ATGAAATTTGTTCTT sfcA 1571213 - 1572937 + | malate dehydrogenase TERM 1950 1572941 - 1572969 + F 72 -8.2 -3.72989 | gap 1, opp_overlap 1572938, overlap 1572944 ACCTCCATCTAAGCC TGCGCCCGGTAGT GAAG GCTACCGGGC-TA TTTCCCTCTCCCTTT TERM 1951 1572944 - 1572967 + F 93 -14.6 -3.4404 | opp_overlap 1572938, overlap 1572941 TCCATCTAAGCCTGC GCCCGGTAGT GAAG GCTACCGGGC TATTTCCCTCTCCCT yddM 1574149 - 1574511 + | hypothetical protein TERM 1952 1574517 - 1574536 + T 95 -12.2 -4.19506 | opp_overlap 1574517 TACGCAATAAAAAAA TGGCGCTT CTTA AAGCGCCA TTTTCAGCTTAAAGT TERM 1953 1574536 - 1574517 - T 100 -12.2 -5.8187 | opp_overlap 1574517 TACGCAATAAAAAAA TGGCGCTT CTTA AAGCGCCA TTTTCAGCTTAAAGT fdnI 1575215 - 1574562 - | formate dehydrogenase-N subunit gamma fdnH 1576092 - 1575208 - | formate dehydrogenase N, nitrate-inducible, iron-sulfur beta subunit TERM 1954 1575306 - 1575318 + g 71 -9.1 -3.5394 | opp_overlap 1575301 1575305, overlap 1575315 TGGCAATAAAGCCAG CCGCT GCC AGCGG TTTCAACGCGCCTTT fdnG 1579152 - 1576105 - | formate dehydrogenase N, nitrate-inducible, alpha subunit TERM 1955 1578378 - 1578406 + g 78 -5.4 -4.75174 | gap 1, opp_overlap 1578374 GCGTAAAACGAGGAT CGACAGCGAT-CA AGGT TGCATCGTTGTTG TTTTTCGCTTCCATC yddG 1579384 - 1580265 + | hypothetical protein TERM 1956 1580296 - 1580268 - f 95 -11.7 -4.07687 | opp_overlap 1580271, overlap 1580271 1580272 ACGTCGTGGTTAAAA TAATTGCCGGGTC TAC GGCCCGGCAGTTA ATCAGATAAATTCCG TERM 1957 1580271 - 1580293 + F 83 -13.4 -3.1706 | opp_overlap 1580268 1580271 1580272 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 1958 1580293 - 1580271 - f 79 -9 -4.17048 | opp_overlap 1580271, overlap 1580268 1580272 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 1959 1580292 - 1580272 - f 80 -12.5 -3.09908 | opp_overlap 1580271, overlap 1580271 1580268 CGTGGTTAAAATAAT TGCCGGGTC TAC GGCCCGGCA GTTAATCAGATAAAT SBO_1585 1580524 - 1580814 + | putative outer membrane porin protein SBO_1586 1581040 - 1580831 - | putative IS1 encoded protein insB 1581115 - 1581618 + | IS1 ORF2 SBO_1588 1582273 - 1583178 + | insertion element IS2 transposase InsD SBO_1590 1583442 - 1583209 - | hypothetical protein SBO_1589 1583381 - 1583596 + | hypothetical protein insB 1584526 - 1584023 - | IS1 ORF2 SBO_1592 1584601 - 1584807 + | putative IS1 encoded protein SBO_1593 1585453 - 1584836 - | putative transferase TERM 1960 1586588 - 1586598 + G 74 -3.2 -4.9792 | AGGCGGGGCAAAGTC CGTT CGT GACG TTTTTCTCTAAACTG ansP 1585669 - 1587219 + | L-asparagine permease TERM 1961 1587250 - 1587228 - T 100 -14.9 -4.19953 | opp_overlap 1587221 GAGTTAATTGCAAAA TTGCCCGGC TACGT GCCGGGCAA ATTCAGATTACTGAC SBO_1595 1588393 - 1587332 - | putative receptor TERM 1962 1588212 - 1588235 + g 72 -4.4 -4.72497 | overlap 1588213 TCCAGTTTGCGGCTT TGCGAAGTGG CGAG CCACAGCGCG TTTTCTTGCTGGCTA TERM 1963 1589306 - 1589291 - g 76 -4 -4.96848 | TGGCGCACAGAAAAA TTTAGC CAAT GCCAAA CTGGGCGTACGCATT SBO_1596 1588635 - 1590737 + | putative outer membrane receptor for iron transport TERM 1964 1590747 - 1590766 + T 89 -11.4 -4.06903 | GAGTAATTACCTTGA TGCCCGGT ATTT GCCGGGCA TTTACTTTAACGATT SBO_1597 1591012 - 1590773 - | putative IS1 encoded protein insB 1591087 - 1591590 + | IS1 ORF2 SBO_1600 1592713 - 1593231 + | putative resistance protein TERM 1965 1593644 - 1593671 + G 72 -7 -4.25283 | gap 1, overlap 1593646 AATTTTACTTGTGGT TG-GCGCCTGGTT GGT AGCCAGACGCTCA TTTTAATCAGAGGAT TERM 1966 1593646 - 1593668 + G 70 -9.8 -3.13504 | overlap 1593644 TTTTACTTGTGGTTG GCGCCTGGTT GGT AGCCAGACGC TCATTTTAATCAGAG SBO_1601 1593228 - 1593677 + | hypothetical protein SBO_1602 1593911 - 1593678 - | hypothetical protein SBO_1603 1594245 - 1593997 - | hypothetical protein SBO_1604 1594994 - 1594770 - | putative IS1 encoded protein SBO_1605 1595563 - 1596468 + | insertion element IS2 transposase InsD insB 1596453 - 1596905 + | IS1 ORF2 SBO_1607 1596907 - 1597188 + | IS600 ORF1 SBO_1608 1597329 - 1598042 + | IS600 ORF2 SBO_1609 1598070 - 1598333 + | hypothetical protein TERM 1967 1598451 - 1598468 + T 100 -10.5 -5.76949 | CCATGCAAGCATTCA CCGCCGG TTTA CTGGCGG TTTTTTTTCGCCGTC TERM 1968 1598527 - 1598491 - T 100 -10.2 -4.82901 | gap 1, opp_overlap 1598492, overlap 1598492 1598494 TCGCCGTCATAAAAA TCAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGGT TAGGTGAGGGATTAT TERM 1969 1598492 - 1598526 + T 85 -13.7 -3.06133 | gap 1, opp_overlap 1598491 1598492 1598494 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 1970 1598526 - 1598492 - T 93 -13.7 -3.49419 | gap 1, opp_overlap 1598492, overlap 1598491 1598494 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 1971 1598524 - 1598494 - T 93 -14.9 -3.31915 | gap 1, opp_overlap 1598492, overlap 1598492 1598491 CCGTCATAAAAATCA GGCCCCTTG-TACA CAAC TGTAACAAGGGGCC GGTTAGGTGAGGGAT insB 1599088 - 1598585 - | IS1 ORF2 TERM 1972 1599352 - 1599380 + H 83 -13.9 -2.55074 | opp_overlap 1599346 CTTGAAAACCTGACA TCCGCGTTGAGTC AAA GACTTATCGCGGA TCAATTACGCTTAAC ydeJ 1599358 - 1599807 + | competence damage-inducible protein A TERM 1973 1599803 - 1599850 + T 79 -8.5 -4.2074 | gap 2, opp_overlap 1599808 1599811, overlap 1599805 1599810 1599811 TGCTGCAATTACTGC TATAACC-A-GGCTGGCCTGGCG ATAT CTCCAGGCCAGCCATTGGTGGTG TTTATATATTCAAGC TERM 1974 1599805 - 1599848 + T 76 -8.9 -3.70043 | gap 2, opp_overlap 1599808 1599811, overlap 1599803 1599810 1599811 CTGCAATTACTGCTA TAACC-A-GGCTGGCCTGGCG ATAT CTCCAGGCCAGCCATTGGTGG TGTTTATATATTCAA TERM 1975 1599844 - 1599808 - T 86 -13 -3.32268 | gap 1, opp_overlap 1599805 1599803 1599810 1599811, overlap 1599811 CAATTACTGCTATAA CCA-GGCTGGCCTGGCG ATAT CTCCAGGCCAGCCATTG GTGGTGTTTATATAT TERM 1976 1599810 - 1599841 + T 100 -15.8 -3.31691 | opp_overlap 1599808 1599811, overlap 1599805 1599803 1599811 ATTACTGCTATAACC AGGCTGGCCTGGCG ATAT CTCCAGGCCAGCCA TTGGTGGTGTTTATA TERM 1977 1599840 - 1599811 - T 100 -19.3 -2.83271 | opp_overlap 1599810 1599805 1599803 1599811, overlap 1599808 TTACTGCTATAACCA GGCTGGCCTGGCG ATAT CTCCAGGCCAGCC ATTGGTGGTGTTTAT TERM 1978 1599811 - 1599840 + T 100 -19.3 -2.58292 | opp_overlap 1599811 1599808, overlap 1599810 1599805 1599803 TTACTGCTATAACCA GGCTGGCCTGGCG ATAT CTCCAGGCCAGCC ATTGGTGGTGTTTAT dcp 1601897 - 1599852 - | dipeptidyl carboxypeptidase II ydfG 1602034 - 1602780 + | 3-hydroxy acid dehydrogenase TERM 1979 1602789 - 1602806 + F 84 -10.5 -3.8591 | TCAGTAATTTTTATA CCCGGCG TAAC TGCCGGG TTATTGCTTGTCACA TERM 1980 1603561 - 1603588 + G 77 -8.4 -4.08064 | opp_overlap 1603549, overlap 1603562 GAAGAGTAATTCATT TACTCTCATCCC ATCC GGGATGAGAGGC TTTTCCCCCCGCCTT TERM 1981 1603562 - 1603587 + G 75 -11.9 -3.04517 | opp_overlap 1603549, overlap 1603561 AAGAGTAATTCATTT ACTCTCATCCC ATCC GGGATGAGAGG CTTTTCCCCCCGCCT ydfH 1602869 - 1603735 + | hypothetical protein SBO_1615 1603732 - 1603935 + | hypothetical protein TERM 1982 1603942 - 1603965 + T 100 -11.8 -5.63103 | gap 1, overlap 1603945 ATGAACTAAGTGTGT G-AATGCCGCC GAT GGCGGCATTGC TTTTTTTACTTCACG TERM 1983 1603945 - 1603961 + T 100 -13.7 -4.07651 | overlap 1603942 AACTAAGTGTGTGAA TGCCGCC GAT GGCGGCA TTGCTTTTTTTACTT ydfI 1605431 - 1603971 - | putative oxidoreductase TERM 1984 1605511 - 1605488 - R 100 -9.6 -5.16841 | TTATATGAATAAAAA TCCCCTCTCC GGTA AGAGAAGGGA TTGAGGGTTTACAGA insB 1606193 - 1605690 - | IS1 ORF2 SBO_1618 1606268 - 1606495 + | putative IS1 encoded protein ipaH_5 1606760 - 1608511 + | invasion plasmid antigen TERM 1985 1608576 - 1608553 - T 93 -10.2 -4.58395 | opp_overlap 1608565 1608566, overlap 1608555 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 1986 1608574 - 1608555 - T 100 -15 -3.90762 | opp_overlap 1608565 1608566, overlap 1608553 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT SBO_1620 1609248 - 1608691 - | putative tail component of prophage SBO_1621 1610104 - 1609145 - | putative phage tail fiber protein SBO_1622 1610432 - 1610127 - | putative tail component encoded by cryptic prophage TERM 1987 1610468 - 1610449 - R 100 -10 -4.85599 | gap 1, opp_overlap 1610449 TTCACCCCACAAAAA GCCCGCCTG AAC CAG-CGGGC TGTCATAACACTGTG SBO_1623 1611095 - 1610496 - | putative membrane protein precursor TERM 1988 1610829 - 1610857 + g 84 -3.7 -5.2112 | overlap 1610831 1610838 GTTACGCACGGAATC CTCATGCCAGCGG GTA TCGCTGTAATGCG TTTTTTGCTCATCTT TERM 1989 1611143 - 1611126 - R 100 -11.3 -5.4505 | opp_overlap 1611124 1611142 TTCTGCAATAAAAAA GGCACCA TTTC TGGTGCC CGTATCTGGGTTATA SBO_1624 1614642 - 1611163 - | host specificity protein TERM 1990 1611979 - 1612008 + g 70 -6.5 -4.18367 | CACAGCCCACATGCT GTTCAGGTTATTA TTTG TATCAACCTGAAC TTTCTGTATCTGCTG TERM 1991 1612881 - 1612906 + g 72 -9.7 -3.30441 | GCACATGCTGCACGG CGGTGATGGCA TACG TGCCGTCGTCG TTCTCACGGATACTC TERM 1992 1614492 - 1614512 + g 71 -3.1 -4.7497 | CGCTGTCCAGGACTG GCGTACCGT TCA GCAGCACGC TTTTTAATCCATCCA TERM 1993 1614686 - 1614663 - R 70 -9.6 -3.01125 | opp_overlap 1614668 1614681, overlap 1614668 ACGCTCCATAAACGA CAAAACCGCC CGCA GGCGGTTTCA CATGAAACATTTTGC TERM 1994 1614681 - 1614668 - R 93 -9.5 -4.64846 | opp_overlap 1614668, overlap 1614663 CCATAAACGACAAAA CCGCC CGCA GGCGG TTTCACATGAAACAT TERM 1995 1614668 - 1614681 + r 75 -9.5 -3.60098 | opp_overlap 1614663 1614668 CCATAAACGACAAAA CCGCC CGCA GGCGG TTTCACATGAAACAT SBO_1625 1615278 - 1614703 - | putative tail component of prophage SBO_1626 1615796 - 1615242 - | tail assembly protein TERM 1996 1615480 - 1615450 - GR 74 -6 -4.45945 | overlap 1615455 1615457 ACCGATGAACCAAAA CAGCACAGCAGCAC ATC GCCCGGTTGTGCTG ATGACAACGGCACCT TERM 1997 1615959 - 1615975 + r 70 -9.5 -3.03214 | opp_overlap 1615929, overlap 1615961 TCGCCGGGCGTGCGC CAGAATC GCT GATTCTG TCTGTGTCATGGATT SBO_1627 1616571 - 1615990 - | minor tail protein TERM 1998 1616377 - 1616357 - G 90 -9.7 -4.42653 | overlap 1616359 ACCGCATCCAGAAAA CGGGCGTAA ACC TTACGCCGG ACCACCGTTCCGCCG TERM 1999 1616540 - 1616554 + g 80 -5.7 -4.94972 | CTGTCGCCCCTGCCA GGTGA CCGGC TCACC TTTTTCGTTCTGCTC SBO_1628 1617018 - 1616689 - | putative minor tail protein TERM 2000 1616823 - 1616792 - G 100 -15.2 -3.35679 | overlap 1616765 1616810 GGTTTCCAGTCATAA GGTGGCGTCCAC TGAAATGC GCGGACGCCACC GTGCCGTTCCAGAAA SBO_1629 1620059 - 1617018 - | putative tail length tape measure protein precursor TERM 2001 1617642 - 1617668 + gr 76 -5 -4.78077 | TTTCCAGTCGCCCTG CGCCACTTCCAG TTC CTGCCAGTAGCG TTTGTTTTCATTCAG TERM 2002 1618222 - 1618239 + gr 77 -2.7 -5.14163 | gap 1, overlap 1618223 1618225 CGGGTGGCCTCATCA T-TACGGG TTG CCCGTGTA TTTTTCTTAATGGCT TERM 2003 1618223 - 1618237 + gr 76 -7.8 -4.19587 | overlap 1618222 1618225 GGGTGGCCTCATCAT TACGGG TTG CCCGTG TATTTTTCTTAATGG TERM 2004 1618225 - 1618235 + gr 72 -8.2 -3.67974 | overlap 1618223 1618222 GTGGCCTCATCATTA CGGG TTG CCCG TGTATTTTTCTTAAT TERM 2005 1619084 - 1619103 + gr 89 -13.6 -3.20723 | opp_overlap 1619080 CACCGGCATAATGTC CCGTCAGC GCCA GCTGACGG TTAAATTCCTCGCCC TERM 2006 1619721 - 1619691 - GR 75 -6.1 -4.37658 | gap 1, opp_overlap 1619692, overlap 1619692 AATCTGGCGATAAAA GGCGGCAGCCGC TTTATCCT GCGCCT-CCGCC AGTGCCCTGGCCTGC TERM 2007 1619692 - 1619702 + gr 74 -8.2 -3.96624 | opp_overlap 1619692 1619691 ATCTGGCGATAAAAG GCGG CAG CCGC TTTATCCTGCGCCTC TERM 2008 1619734 - 1619752 + gr 70 -4.4 -4.5442 | overlap 1619728 GCCAGTGCCCTGGCC TGCGCCTG TTC CTCGCGCA TTTTCTGATTCAGGG SBO_1630 1620252 - 1620031 - | putative tail component of prophage TERM 2009 1620157 - 1620144 - GR 76 -8.1 -4.07568 | overlap 1620155 TCTCTTCCGGTAAAA GGCTG AAAT CAGCC ACCGCAGCATCACTG SBO_1631 1620754 - 1620368 - | putative tail component of prophage TERM 2010 1620793 - 1620776 - R 100 -14.1 -4.65895 | CTCCGGATGCAAAAA GCCCCGG ATAA CCGGGGC AATGATGAGTATCGT SBO_1632 1621553 - 1620813 - | putative tail component of prophage SBO_1633 1621965 - 1621564 - | putative tail component of prophage SBO_1634 1622549 - 1621962 - | putative tail component of prophage SBO_1635 1622781 - 1623200 + | ISSfl4 ORF1 TERM 2011 1623580 - 1623549 - f 72 -5.2 -4.60255 | gap 1, overlap 1623550 1623551 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 2012 1623579 - 1623551 - f 71 -10.3 -2.60776 | overlap 1623549 1623550 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_1636 1623576 - 1624103 + | putative protein encoded within IS SBO_1637 1624173 - 1625168 + | putative protein encoded within IS TERM 2013 1625197 - 1625166 - f 76 -7.5 -4.258 | gap 2 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CGAAACTGCTGGGAT SBO_1638 1625222 - 1625428 + | IS911 ORF2 SBO_1640 1626850 - 1625903 - | hypothetical protein TERM 2014 1626604 - 1626567 - G 89 -14.3 -3.14404 | ATATCAATCACCGAA TTTGCCACCAGTACGAT TTCC ACCGCACCGGTGACAAA GGTCAACAGACATGT TERM 2015 1627262 - 1627252 - R 74 -5.4 -4.62069 | opp_overlap 1627252 TGGTTAGCGCAAAAA TAGC GAT GCTA TTACGTAGCAGATGA SBO_1641 1627819 - 1627460 - | hypothetical protein TERM 2016 1627593 - 1627575 - G 82 -11.7 -3.524 | CACTTAGCCAGACAA CCGCGAC AGCAG GTCGCGG TGGCGTGCTGAGCGA TERM 2017 1628759 - 1628783 + r 72 -10.8 -2.87931 | gap 1 CTTTCTACTCCTGGA C-CGCAGGTCT GAAA AGACCTGCGAG TATATCAGAGCTGAA SBO_1643 1630220 - 1628808 - | putative aldehyde dehydrogenase TERM 2018 1629208 - 1629220 + g 86 -9.1 -4.3898 | opp_overlap 1629203 1629202 AGTAACAAACGCGCA CCCTG CGC CAGGG TTTTCTCCACCTGAT TERM 2019 1629649 - 1629663 + g 80 -11.4 -3.35046 | overlap 1629647 CAGCCATATACGCCT TGCGGG ATT CCCGCA TCTTTAAACACCTGG yneJ 1630297 - 1631178 + | putative transcriptional regulator LYSR-type TERM 2020 1631690 - 1631701 + G 72 -5.8 -4.40605 | TTTCACACCGGCGTC GAGC GTGT GCTC TTTCTGTTTCTGAAT SBO_1645 1631663 - 1632370 + | hypothetical protein ydeA 1632520 - 1633710 + | sugar efflux transporter TERM 2021 1633730 - 1633717 - T 79 -9.5 -3.6707 | opp_overlap 1633717 ACGCAATAGTTGAAA GGCCC ATTC GGGCC TTTTTTAATGGTACG TERM 2022 1633717 - 1633730 + T 100 -9.5 -5.1861 | opp_overlap 1633717 ACGCAATAGTTGAAA GGCCC ATTC GGGCC TTTTTTAATGGTACG ydeB 1634400 - 1633735 - | multiple drug resistance protein MarC marR 1634612 - 1635046 + | DNA-binding transcriptional repressor MarR TERM 2023 1635404 - 1635416 + G 72 -4.7 -4.68424 | GATGACCAATATGCA GGGCG AAT CGCGC TTTTTACATCCATTA marA 1635066 - 1635449 + | DNA-binding transcriptional activator MarA TERM 2024 1635585 - 1635618 + G 77 -8.9 -4.08485 | gap 1, overlap 1635585 TTCTTGTGCCAATGT C-GTGGTTGTTCCCCC ATC GCAGGAACAACCACCG TTTGATTTAAATCAC marB 1635481 - 1635699 + | hypothetical protein SBO_1652 1636535 - 1636861 + | IS629 ORF1 TERM 2025 1637181 - 1637169 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_1653 1636861 - 1637748 + | IS629 ORF2 TERM 2026 1638105 - 1638124 + T 71 -7 -4.07568 | opp_overlap 1638093 1638092 AACCGCGCCTTATAT CCCCGCCC TGAA GGATGGGG TTTTACGGCGCACCG TERM 2027 1638167 - 1638148 - T 100 -13.6 -4.85599 | CGCACCGGATAAAAA GCGCCATC TAAC GATGGCGC GTCTGGAACTACTTT SBO_1654 1638613 - 1638284 - | hypothetical protein TERM 2028 1638580 - 1638604 + g 77 -8.6 -4.07885 | opp_overlap 1638580 AAATTTTATCCAGAA CTTTCTGCCC TACCT GGGTAGAAGG TTTTGGCACCGGATA insB 1639266 - 1638763 - | IS1 ORF2 SBO_1656 1639341 - 1639547 + | putative IS1 encoded protein TERM 2029 1639539 - 1639523 - T 77 -3.7 -5.1101 | GCATTACCTAAAAAA CCAGA ATATTTA TCTGG CTGGGTGATTTTAGA tehB 1640516 - 1639923 - | tellurite resistance protein TehB TERM 2030 1639977 - 1640006 + g 73 -9.2 -3.58428 | AATACGATTACCGTT GGCGTCGGTGCG GTGCAG CTCGCCGACGTC TTCATTGTATTTCAC tehA 1641505 - 1640513 - | potassium-tellurite ethidium and proflavin transporter TERM 2031 1641023 - 1641005 - G 72 -5.3 -4.56597 | gap 1, overlap 1641007 GCCTGCGCCTAAAAA CACCAGAC CGGC GTC-GGTG TAGCCCAACGCACCA TERM 2032 1642178 - 1642190 + G 77 -3.3 -5.0925 | opp_overlap 1642178 TATGCTTTTATTGAA CATCG CGC CGAAG TTTTTGATTTTGCCA SBO_1659 1641845 - 1642609 + | hypothetical protein rimL 1643140 - 1642604 - | ribosomal-protein-L7/L12-serine acetyltransferase TERM 2033 1642731 - 1642695 - G 74 -6.5 -4.5442 | opp_overlap 1642699 1642707 1642729, overlap 1642696 1642699 CCTTCAAGGATAAAA CCATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTGT CCACCCGACATTTGA TERM 2034 1642730 - 1642696 - G 72 -10 -3.3217 | opp_overlap 1642699 1642707 1642729, overlap 1642695 1642699 CTTCAAGGATAAAAC CATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTG TCCACCCGACATTTG TERM 2035 1642699 - 1642727 + g 83 -12.5 -3.28791 | opp_overlap 1642699 1642696 1642695, overlap 1642707 CAAGGATAAAACCAT TGCGCAAAGCGAC CTG GTTGCTTTGCGGA TTGTCCACCCGACAT TERM 2036 1643192 - 1643176 - R 100 -10.8 -5.00616 | GCTGTTGTTAAAAAA GCCGCC TGGCT GGCGGC TTAGGAAAGTTTACA TERM 2037 1643222 - 1643234 + r 73 -7.7 -4.13282 | ACCCCTTTGACGCTC TCCTG CTG CAGGA TTTTGAGCATCTCAT ydcH 1643370 - 1643203 - | hypothetical protein TERM 2038 1643554 - 1643531 - gR 90 -14.6 -2.90075 | TCGTGTTTAACCAGA CGGCACCTCC CGAA GAAGGTGCCG AAGAAAAAACGATTA mdoD 1645222 - 1643567 - | glucan biosynthesis protein D SBO_1662 1643443 - 1643646 + | hypothetical protein TERM 2039 1644756 - 1644744 - GT 74 -6.9 -4.21827 | opp_overlap 1644745 1644746, overlap 1644745 TTAAACACGCGAAAA CCGGC AAA GCCGA GATCGCTTTGCCCTT SBO_1664 1646790 - 1645447 - | hypothetical protein TERM 2040 1646432 - 1646415 - G 75 -5.5 -4.7078 | GTAAGGAGGTAAAAA CGCGGAA GGGA TTACGCG CCAGAGAAGCATCAT TERM 2041 1648867 - 1648879 + r 100 -9.1 -5.10497 | TCATTCATCGTCAGA TCGCC ACT GGCGA TTTTTTCAATCCGTT TERM 2042 1649919 - 1649880 - R 72 -9.2 -3.6217 | overlap 1649878 1649884 CGGGAATCAGAAAGA CGAAGGCCCCGACCGATA TTTC TATCAACCGAGGCCAACG AATGAACCTAGCAAA TERM 2043 1649915 - 1649884 - R 86 -11.6 -3.52009 | overlap 1649880 1649878 AATCAGAAAGACGAA GGCCCCGACCGATA TTTC TATCAACCGAGGCC AACGAATGAACCTAG insB 1650741 - 1650238 - | IS1 ORF2 SBO_1668 1650816 - 1651037 + | putative IS1 encoded protein TERM 2044 1651140 - 1651172 + T 78 -4.9 -4.92385 | overlap 1651139 1651142 TAGACCCGTATTCTT CGCCTGTACCA CGGGTCGGTTT TAGTACAGGCG TTTTCTTTAAATATC cybB 1651720 - 1651190 - | cytochrome b561 SBO_1670 1652836 - 1651997 - | IS911 ORF2 TERM 2045 1652405 - 1652416 + g 77 -5.8 -4.63218 | opp_overlap 1652401 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 2046 1652757 - 1652777 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG gapC 1653212 - 1654162 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2047 1654169 - 1654194 + T 90 -10.4 -4.3534 | overlap 1654171 AAACTCTGACGCGCA CAGGCGGAGG AAAAAA CCTCCGCCTC TTTTACTCATTACGA TERM 2048 1654171 - 1654192 + T 95 -13 -3.77927 | overlap 1654169 ACTCTGACGCGCACA GGCGGAGG AAAAAA CCTCCGCC TCTTTTACTCATTAC aldA 1655644 - 1654361 - | aldehyde dehydrogenase, NAD-linked TERM 2049 1655801 - 1655837 + r 82 -8 -4.62069 | overlap 1655802 TAAAAGTCAGGAGTC ATGCCCGTTTGCAAAC AAGTG GTTCACAAACGGGCAA TTTTTGACGTAACGA TERM 2050 1655802 - 1655836 + r 79 -11.5 -3.3692 | overlap 1655801 AAAAGTCAGGAGTCA TGCCCGTTTGCAAAC AAGTG GTTCACAAACGGGCA ATTTTTGACGTAACG ydcF 1656641 - 1655799 - | hypothetical protein hrpA 1660758 - 1656913 - | ATP-dependent RNA helicase HrpA TERM 2051 1658078 - 1658035 - G 72 -5.2 -4.57073 | opp_overlap 1658033 1658034 1658035 GACGCGGCCTAAAAA CGCTTCGGCGTAGTTTGGTG CAGG CACAAAATTACGGCGTACCG GTTTCGGCAACGATT TERM 2052 1659088 - 1659106 + g 75 -6.7 -4.30576 | opp_overlap 1659088 ACACAGGCGACGGAA GGCGTTT GAAGA AAGCGCC TTTTGCTGCTCGCCA TERM 2053 1659162 - 1659183 + g 71 -2.9 -4.7373 | overlap 1659167 CGAGGAAGTCGGATT CTTTGTCGT GGAA GCGACGATG TTTTTCGTCCGATGC TERM 2054 1660820 - 1660846 + H 75 -3.1 -5.10933 | gap 1, overlap 1660826 TGTTCTGTCATAACG TTAGT-GGGCAG TAGT CTGCCTGATTAA TTTTCTTTTAAATGA acpD 1661016 - 1661621 + | azoreductase ynbD 1662964 - 1661672 - | putative enzyme SBO_1677 1664330 - 1662978 - | hypothetical protein insB 1665170 - 1664667 - | IS1 ORF2 SBO_1679 1665245 - 1665427 + | putative IS1 encoded protein TERM 2055 1665748 - 1665758 + G 71 -2.4 -4.89852 | CCTCTTTTTGCTATT GCCC ATC GTGC TTTTTATCCGTATGG SBO_1680 1665575 - 1665916 + | hypothetical protein SBO_1681 1666086 - 1665877 - | putative IS1 encoded protein insB 1666161 - 1666664 + | IS1 ORF2 ydbL 1667005 - 1666658 - | hypothetical protein ynbE 1667195 - 1667010 - | hypothetical protein ydbH 1669831 - 1667192 - | hypothetical protein TERM 2056 1667498 - 1667513 + g 74 -10.4 -3.51934 | overlap 1667496 CATATTGTCTTTCAC CACCGC ATCT GCGGTG TCTTTATCCAGCCGC TERM 2057 1668832 - 1668857 + g 89 -13.3 -3.39862 | CCTGTTTCGCTTCAC CGGTCAGCTGC AGAG GCAGCTGGCTG TTATCCATGCTTAAT TERM 2058 1670261 - 1670236 - g 84 -7.5 -4.66953 | opp_overlap 1670257, overlap 1670253 GGAAGAGCTGAAAAA GCACGGCGTTA AATA TATCGCCCTGC GCTGTGCCGGTTTCA ldhA 1670039 - 1671028 + | fermentative D-lactate dehydrogenase, NAD-dependent TERM 2059 1671036 - 1671058 + F 86 -14.9 -2.74012 | TGGTTTAATGTTGCA GCTCCCCTG CAATC CAGGGGAGC TGATTCAGATAATCC hslJ 1671139 - 1671561 + | heat-inducible protein TERM 2060 1671905 - 1671920 + F 83 -4.6 -5.27769 | CATCGAGAGCTGTCC TGCGCG TTGC CCCGCA TTTTTACTTTTTTAT TERM 2061 1673094 - 1673082 - g 70 -6.9 -4.13903 | GACAGAACCAAAGAA CCCGG TGC CCAGG CAGAACCGCTCTATC TERM 2062 1673748 - 1673729 - g 70 -10 -3.16564 | gap 1 CTTCTATGTGATTAA CGC-GGCGA AAA TCGCCCGCG AATGTGGCCTGGCGG TERM 2063 1673778 - 1673791 + G 77 -3.1 -5.1287 | overlap 1673776 GCCCGTATTAATACC GTCAT GCAG ATGGC TTTTTTCCATCTGAC ydbK 1672098 - 1675622 + | putative oxidoreductase, Fe-S subunit TERM 2064 1675654 - 1675683 + F 87 -7.1 -5.10064 | opp_overlap 1675659, overlap 1675656 1675659 TTATCCAATTCTAAA AAAAAGCCCGGAC GACT GTTCGGGCTTGTC TTTTTATATGTTGGA TERM 2065 1675656 - 1675681 + F 83 -9.7 -4.16832 | opp_overlap 1675659, overlap 1675654 1675659 ATCCAATTCTAAAAA AAAGCCCGGAC GACT GTTCGGGCTTG TCTTTTTATATGTTG TERM 2066 1675659 - 1675678 + F 89 -11.4 -4.16226 | opp_overlap 1675659, overlap 1675656 1675654 CAATTCTAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG TERM 2067 1675678 - 1675659 - f 100 -9.2 -5.81032 | opp_overlap 1675659 1675656 1675654 CAATTCTAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG SBO_1689 1675988 - 1677121 + | putative outer membrane protein TERM 2068 1677130 - 1677148 + F 100 -10.2 -5.03945 | GTTCTAAATCCTCCT GCCCGCTG TTA TGGCGGGC TTTTTCTGCTTATTC ynaF 1677190 - 1677696 + | putative filament protein TERM 2069 1677704 - 1677723 + F 100 -10.7 -4.95957 | opp_overlap 1677704 1677703 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2070 1677723 - 1677704 - f 70 -10.7 -2.55351 | opp_overlap 1677704, overlap 1677703 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2071 1678202 - 1678217 + F 79 -7.6 -4.4522 | opp_overlap 1678202, overlap 1678187 GGTTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG TERM 2072 1678217 - 1678202 - f 79 -7.6 -4.4009 | opp_overlap 1678187 1678202 GGTTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG sitA 1678253 - 1679167 + | Iron transport protein, periplasmic-binding protein sitB 1679167 - 1679994 + | Iron transport protein, ATP-binding component sitC 1679991 - 1680848 + | iron transport protein, inner membrane component sitD 1680845 - 1681702 + | Iron transport protein, inner membrane component TERM 2073 1681906 - 1681874 - T 73 -10.6 -3.10012 | gap 1, opp_overlap 1681873 1681874 AAGTTTACCAGCCAA CCGCGGCACGTTCCT GCAT ACGA-CGTGCCGCAG CTTCTGTTATTCCAC SBO_1695 1682593 - 1682030 - | ISSfl4 ORF3 TERM 2074 1682796 - 1682823 + r 76 -9.1 -3.73402 | gap 1, overlap 1682815 TTCGTCTTTCCGTTC CCCGGGGCCAGT ACTGA AC-CGCCCCGGG TTTCCTGGAGAGTGT SBO_1696 1683739 - 1682852 - | IS629 ORF2 TERM 2075 1683419 - 1683431 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_1697 1684014 - 1683739 - | IS629 ORF1 SBO_1698 1684945 - 1684091 - | ISSfl4 ORF3 TERM 2076 1684692 - 1684709 + g 82 -9.1 -4.19238 | overlap 1684680 TCTTCCAGAAGATTT CTGGCTG TGTT CAGCCGG TTTTCCAGTTCCGAC TERM 2077 1684714 - 1684751 + g 70 -6.2 -4.1585 | overlap 1684715 1684719 TGTTCAGCCGGTTTT CCAGTTCCGACAGTCG TTTTTC TGCCTGTCGGATCTGA TTTTCAAGCTTATGA SBO_1699 1685805 - 1685422 - | putative transposase SBO_1700 1686654 - 1685815 - | IS911 ORF2 TERM 2078 1686223 - 1686234 + g 77 -5.8 -4.63218 | opp_overlap 1686219 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 2079 1686575 - 1686595 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 2080 1687462 - 1687448 - R 100 -8.5 -5.64274 | opp_overlap 1687447 1687445 1687448 TCAGGTATAAAAAAA CCCGC ATAAA GCGGG CTCTTTCAAATGTCC SBO_1704 1688096 - 1687542 - | hypothetical protein SBO_1705 1688865 - 1688152 - | IS600 ORF2 SBO_1706 1689308 - 1689006 - | IS600 ORF1 SBO_1707 1689478 - 1689753 + | IS629 ORF1 TERM 2081 1690073 - 1690061 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_1708 1689753 - 1690640 + | IS629 ORF2 TERM 2082 1690976 - 1690940 - T 100 -8.6 -5.74288 | gap 1, opp_overlap 1690940 ATAAACAACAAAAAA CCCGCCGAAACGCTGAG AGAT CACAGCGATG-GGCGGG TTAAGTGCGGGTGCG TERM 2083 1691180 - 1691195 + T 83 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 2084 1691274 - 1691324 + T 100 -12.1 -4.64844 | gap 1, opp_overlap 1691241 CAAAGCATGAAATTG GCCTCAGATTAATGTTAAGCGTCT TGCC GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC SBO_1709 1692137 - 1691451 - | hypothetical protein TERM 2085 1692693 - 1692673 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 2086 1693045 - 1693034 - g 77 -5.8 -4.63218 | opp_overlap 1693039 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_1710 1692614 - 1693222 + | IS911 ORF2 SBO_1711 1694112 - 1693225 - | IS629 ORF2 TERM 2087 1693792 - 1693804 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_1712 1694387 - 1694121 - | IS629 ORF1 ydaC 1694629 - 1694817 + | hypothetical protein SBO_1714 1695873 - 1695142 - | IS600 ORF2 SBO_1715 1696315 - 1696028 - | IS600 ORF1 TERM 2088 1697206 - 1697193 - g 71 -3.1 -4.85782 | gap 1, overlap 1697194 1697195 TCCCCCAAAAACAAA TGCCGG GAT CCGG-A CGGTAACATTACTGC SBO_1716 1696390 - 1697625 + | putative transposase TERM 2089 1697758 - 1697737 - g 81 -4.3 -5.0809 | opp_overlap 1697754 1697757 AACAAATTACAAAAA CGTCTACGT CGTA ACGTGGGCG AAGCCATTGCTGACT TERM 2090 1697932 - 1697920 - g 84 -10.5 -3.71672 | CTCGATCAAAAGCAA CCGGG CTT CCCGG AACACGTTCTGCCCG ydaO 1697677 - 1698612 + | C32 tRNA thiolase TERM 2091 1698623 - 1698646 + T 87 -14.6 -2.80074 | opp_overlap 1698621 1698613, overlap 1698621 1698619 AATAACCAGGATAGC GCCCGATGCG CAAG CGTATCGGGC TACTCTTATGGAGGC dbpA 1700114 - 1698741 - | ATP-dependent RNA helicase DbpA TERM 2092 1698999 - 1699025 + g 70 -4.4 -4.52857 | opp_overlap 1699000, overlap 1699000 1699004 CGGCACAATGGAACT ATTAGCTGGCGG CGT TTGCCAGTTAAG TTTTATCTGCAACAT TERM 2093 1700370 - 1700351 - R 100 -10 -5.85178 | AACAGGCAAAAAAAA GCCGACTC ATCA AAGTCGGC GTCGTACGAATCAAT TERM 2094 1700507 - 1700524 + r 72 -2.7 -4.96848 | gap 1 AGAGTTTATTGACTT CGCT-CAA ACT TTGCGGCG TTTTTGTATACAGAC zntB 1701543 - 1700560 - | zinc transporter TERM 2095 1702167 - 1702196 + G 82 -2.9 -5.28176 | gap 1, opp_overlap 1702166, overlap 1702168 1702169 CGCTCGGCAAATTAT CAGCGCA-AAAAAC AAG GTTTTTATGCGCGC TTTTTTCTGACTAAC TERM 2096 1702566 - 1702527 - g 71 -3.4 -4.75372 | gap 1, overlap 1702529 ATTACTGAGCAAAAA CGGCTGGAGGAGCAGC-TG GAA CATGCTGCTCACCATGACG CGATGACCGGATTAC SBO_1720 1701738 - 1703030 + | hypothetical protein ydaL 1703614 - 1703051 - | hypothetical protein TERM 2097 1703510 - 1703485 - G 72 -10.4 -3.34227 | opp_overlap 1703502 TGAGGAAATTATCAA GCTGCAGCGT GTCGAT ACGCTGCGGC GCACGTTGGTTACGC TERM 2098 1703900 - 1703928 + r 100 -12.5 -5.63504 | CTGCTGTGTGTACTG TAGAGTCTGGCGG ATG TCGACAGACTCTA TTTTTTTATGCAGTT ydaK 1704852 - 1703944 - | putative DNA-binding transcriptional regulator TERM 2099 1705653 - 1705698 + H 79 -8.3 -4.36914 | gap 1, overlap 1705657 TTACTGCCGTGCACA TTGGCACTGGCGTAC-CTGCGG GCA CCGTGGTGTGCGGCAGTGATAA TTTTATGGCAACCAC TERM 2100 1705657 - 1705694 + H 73 -11.3 -2.50077 | gap 1, overlap 1705653 TGCCGTGCACATTGG CACTGGCGTAC-CTGCGG GCA CCGTGGTGTGCGGCAGTG ATAATTTTATGGCAA TERM 2101 1706287 - 1706299 + H 72 -10.5 -2.76404 | opp_overlap 1706282 1706283, overlap 1706285 1706285 GCCGTCGAAACGCTG GCGCG CAC CGCGC TCAATTTTCCCTGGA SBO_1724 1706328 - 1707773 + | hypothetical protein abgT 1707900 - 1709336 + | putative aminobenzoyl-glutamate transporter ogt 1709347 - 1709862 + | O-6-alkylguanine-DNA:cysteine-protein methyltransferase fnr 1710057 - 1710809 + | fumarate/nitrate reduction transcriptional regulator TERM 2102 1710831 - 1710879 + F 79 -12 -3.23638 | CGCATAACTCACTAT CCTTCTGTCATATCATTAAATT TTTCT GATTTATTGATCTGGCAGAAGG TTCATCACTGTTTCA ydaA 1710961 - 1711911 + | universal stress protein UspE TERM 2103 1711931 - 1711952 + T 100 -10.1 -5.30155 | opp_overlap 1711933, overlap 1711933 TCTTCAATAACTGAC AAGGCCCGA GTTA TCGGGCCTA TTTTTTACTTACTGC TERM 2104 1711933 - 1711950 + T 95 -12.7 -4.27681 | opp_overlap 1711933, overlap 1711931 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT TERM 2105 1711950 - 1711933 - T 88 -12.7 -3.47751 | opp_overlap 1711931 1711933 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT ynaJ 1712173 - 1711961 - | hypothetical protein insB 1712867 - 1712364 - | IS1 ORF2 SBO_1731 1712942 - 1713154 + | putative IS1 encoded protein SBO_1732 1713240 - 1714271 + | hypothetical protein TERM 2106 1714310 - 1714283 - T 83 -14.2 -2.74525 | overlap 1714280 1714299 CTAAATCAGACATCA CTGGCGTTATCC ACAA GGGTAACGCCAG TTCCCATCACATCAA SBO_1733 1715956 - 1714322 - | putative transport periplasmic protein TERM 2107 1714930 - 1714940 + g 70 -6.8 -4.11484 | opp_overlap 1714930 1714929 CATCTGGTGTAAAAT GCCA CGC TGGC TTTTCGCCCGTTCCC TERM 2108 1715696 - 1715710 + g 70 -7.1 -4.11884 | CTGAGTCGCAACGCC GGGGA CAATC TCCCC TTTCTCGTTCTGATT ycjZ 1717171 - 1716272 - | putative transcriptional regulator LYSR-type SBO_1735 1718123 - 1717218 - | insertion element IS2 transposase InsD SBO_1736 1718446 - 1718081 - | insertion sequence 2 OrfA protein SBO_1737 1718911 - 1719546 + | hypothetical protein SBO_1738 1719546 - 1719911 + | putative dienelactone hydrolase and related enzyme insB 1720139 - 1720642 + | IS1 ORF2 TERM 2109 1720968 - 1720942 - g 70 -5 -4.4891 | CTGACTACTATAAAA CACCACGCGG GCAACAA CCGGGAGGTG CGACAAAAATGTTGT TERM 2110 1721216 - 1721230 + G 74 -2.8 -5.00616 | AGTTCAGGAGGCGCT GGAAAA AGT TATTCC TTTTTTCAACCCCCA SBO_1740 1720662 - 1721255 + | hypothetical protein SBO_1741 1722078 - 1721365 - | IS600 ORF2 SBO_1742 1722520 - 1722233 - | IS600 ORF1 SBO_1743 1722587 - 1723177 + | hypothetical protein TERM 2111 1723197 - 1723221 + F 76 -7.9 -4.22591 | overlap 1723191 ATTACATAGTTACCA TCGTAATGTAC TAT GTGCAGTACGA TTTATTAAACTTATT TERM 2112 1723436 - 1723423 - f 72 -5.3 -4.63932 | TAGCGTTGAAGAAAA GGATT TGAT AATCC GCAAAATTTGCACAA TERM 2113 1723506 - 1723521 + G 73 -11.8 -2.71712 | overlap 1723505 CCGTAACCCGCCCAC GCGCCG AACG CGGCGC ATTTCCGCCCGGAAC TERM 2114 1723916 - 1723880 - g 78 -9.3 -3.91144 | opp_overlap 1723881 1723906, overlap 1723881 CTGACAGGTGACAAA CCTGGCTCAGAACCTGA AAC CCAGGCGCTGTGCCAGC TTATACACCGCATTC TERM 2115 1723915 - 1723881 - g 78 -12.8 -2.94365 | opp_overlap 1723881 1723906, overlap 1723880 TGACAGGTGACAAAC CTGGCTCAGAACCTGA AAC CCAGGCGCTGTGCCAG CTTATACACCGCATT ycjI 1723427 - 1724215 + | murein peptide amidase A ycjG 1725104 - 1724190 - | putative muconate cycloisomerase I tpx 1725274 - 1725780 + | thiol peroxidase TERM 2116 1725775 - 1725829 + T 72 -8.9 -3.63862 | gap 2, opp_overlap 1725775 1725781 1725786, overlap 1725779 1725788 CTGGCTGTACTGAAA GCATAAGT-T-AATATGCCTGATGGTG TTG CACCATCAGGCATATTCGCGCTTACTC TTCGTTCTTCTTCTG TERM 2117 1725827 - 1725775 - T 86 -12.1 -3.64703 | opp_overlap 1725775 1725779 1725788, overlap 1725781 1725786 CTGGCTGTACTGAAA GCATAAGTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCGCGCTTAC TCTTCGTTCTTCTTC TERM 2118 1725779 - 1725823 + T 90 -13.7 -3.4382 | opp_overlap 1725775 1725781 1725786, overlap 1725775 1725788 CTGTACTGAAAGCAT AAGTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCGCGC TTACTCTTCGTTCTT TERM 2119 1725821 - 1725781 - T 100 -18.5 -3.61609 | opp_overlap 1725779 1725775 1725788, overlap 1725775 1725786 GTACTGAAAGCATAA GTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCGC GCTTACTCTTCGTTC TERM 2120 1725816 - 1725786 - T 100 -21.4 -3.27601 | opp_overlap 1725779 1725775 1725788, overlap 1725781 1725775 GAAAGCATAAGTTAA TATGCCTGATGGTG TTG CACCATCAGGCATA TTCGCGCTTACTCTT TERM 2121 1725788 - 1725814 + T 100 -19.6 -3.06737 | opp_overlap 1725786 1725781 1725775, overlap 1725779 1725775 AAGCATAAGTTAATA TGCCTGATGGTG TTG CACCATCAGGCA TATTCGCGCTTACTC tyrR 1727365 - 1725824 - | DNA-binding transcriptional regulator TyrR ycjF 1728574 - 1727513 - | hypothetical protein ycjX 1729968 - 1728571 - | YcjX SBO_1750 1730292 - 1730062 - | putative IS1 encoded protein insB 1730367 - 1730870 + | IS1 ORF2 TERM 2122 1731123 - 1731133 + T 76 -4.6 -4.98522 | CGACCAAAACTACGG CGGG TAA TCCG TTTTTCTCTGAAGTT insB 1731781 - 1731278 - | IS1 ORF2 SBO_1753 1731856 - 1732071 + | putative IS1 encoded protein TERM 2123 1732315 - 1732300 - T 100 -11.8 -6.02914 | GTGACAGAAAAAAAA CGGCGC ATAA GCGCCG CTCATGGTGAATTCT pspE 1732646 - 1732332 - | thiosulfate:cyanide sulfurtransferase (rhodanese) pspD 1732942 - 1732721 - | peripheral inner membrane phage-shock protein pspC 1733310 - 1732951 - | DNA-binding transcriptional activator PspC pspB 1733534 - 1733310 - | phage shock protein B pspA 1734256 - 1733588 - | phage shock protein PspA TERM 2124 1733673 - 1733683 + g 82 -3.2 -5.27335 | opp_overlap 1733669 AGTTCGGCAAACTGA TCGT CCA GCGA TTTTTGTTTACCGAA TERM 2125 1735300 - 1735286 - g 93 -8.6 -4.77438 | opp_overlap 1735285 1735288, overlap 1735289 ATGCAGCAGGAAAAA GAGTTG CTG CAACTC AGTTTGCAACAAGGG pspF 1734422 - 1735399 + | phage shock protein operon transcriptional activator goaG 1736784 - 1735519 - | PLP-dependent GABA aminotransferase TERM 2126 1735927 - 1735909 - G 75 -11.6 -3.05816 | GTAGGTGCCACCCAA CCCGCCCG GCG CGGGCGCG TCCATAATATTCGCG ordL 1738054 - 1736822 - | oxidoreductase TERM 2127 1736899 - 1736877 - G 70 -11.2 -2.72511 | overlap 1736876 CCCATCGCGGTAAAT GGCACGCGCA GCG TGCGCCCGCC GGGGAACGGGTAATG TERM 2128 1737532 - 1737548 + g 79 -10.1 -3.767 | GGCGGATGGCGTCCG CTTCGCC AAT GGCGAGG TTTAGTGGGTGAATA aldH 1739580 - 1738093 - | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase TERM 2129 1738709 - 1738725 + g 84 -7.9 -4.59773 | TAGAAGATGCCTGCT GCGGTGG AGC TCGCCGC TTTTTGCAGATCCGA TERM 2130 1739417 - 1739429 + g 74 -7.7 -4.07885 | TCGATATCGACGCTC TTGCC GCG GGCAA TTTTCGCCAGCGGTG TERM 2131 1739645 - 1739659 + r 81 -8.5 -4.55295 | GGGCGCAGAGATCCC CGGGC CGTAT GCCCG TTTATTTCTGGCGAC ycjC 1740412 - 1739855 - | DNA-binding transcriptional repressor PuuR TERM 2132 1742206 - 1742196 - g 70 -5.4 -4.4009 | TCTGATGGCAGAAAA GCAT AAG ATGC ACTCCACTTTTATGG SBO_1765 1741336 - 1742832 + | putative glutamine synthetase TERM 2133 1744335 - 1744316 - g 71 -2.9 -4.81082 | gap 1, opp_overlap 1744317 1744318, overlap 1744317 1744318 AAGGAATGAATAAAA GCTGGAAG GATCA CTTCCA-C TATTTGCTGATGCCG ycjJ 1743136 - 1744521 + | putative amino acid/amine transport protein TERM 2134 1744578 - 1744522 - f 71 -9.7 -3.29324 | opp_overlap 1744530 1744530 GTGAGTGAAACGTAA TAGTCGGATG-CGCGGCGCATTATCCT GCCGG AGGGTAATGCACCGCGCCATT-AACTA TAAAAAGATGTATGA TERM 2135 1744530 - 1744571 + F 90 -14.6 -3.12351 | gap 1, opp_overlap 1744522, overlap 1744530 AACGTAATAGTCGGA TG-CGCGGCGCATTATCCT GCCGG AGGGTAATGCACCGCGCCA TTAACTATAAAAAGA ymjA 1744655 - 1744900 + | hypothetical protein TERM 2136 1745109 - 1745077 - f 100 -15.7 -3.16039 | opp_overlap 1745086, overlap 1745064 AAGCACGGGTACGAA TGTTGAACAGATGGC GAC GCCACCTGTTCAACG ACCAACCACACGGCC TERM 2137 1745305 - 1745316 + G 81 -7.2 -4.68545 | overlap 1745309 CCCGCATGCTGATAT CCGC GACA GCGG TTTTGTCTATTGCGT sapA 1745213 - 1746856 + | SapA sapB 1746853 - 1747818 + | hypothetical protein TERM 2138 1747867 - 1747834 - g 91 -10.9 -4.26188 | gap 1, opp_overlap 1747833 CGTATACAGCGAAAA GCGCCCGCCGGGCACG CTG CGTACC-GCCTGGCGC AAATTTTATAGTGAC TERM 2139 1748089 - 1748110 + G 86 -10.9 -3.96892 | gap 1 TTTACTGAGCGGAGC TGCGCCAACC GTG GGT-GGCGCA TTTGTGGTGACGCTT sapC 1747805 - 1748695 + | SapC sapD 1748695 - 1749687 + | putative ATP-binding protein of peptide transport system TERM 2140 1749746 - 1749729 - g 77 -6.9 -4.45664 | opp_overlap 1749738 1749739 GTAATTTAAGTAAAA CGTTCCG CTAC CGGACCG GCTGGTTTCGCCGTC sapF 1749689 - 1750495 + | putative ATP-binding protein of peptide transport system TERM 2141 1750567 - 1750521 - f 100 -17.6 -2.62184 | CCTCCTTCCAGATTA TCCACCTCATTCTGACAAGA GATTAAA TCTTGTCAGAATGAGGTGAT GGATAAAATAAAATC ycjD 1750563 - 1750916 + | hypothetical protein TERM 2142 1750936 - 1750895 - f 77 -11.5 -3.20723 | gap 1 TCTGCAGGAACTGAA CCGCCGATCACCCTCACCCT GAA AGGGCGAGGGGG-CCGACCG AGCCGAATAGCTGTT TERM 2143 1751084 - 1751106 + F 90 -14.8 -3.25823 | TTGCACAATATGGTC CCCTCGCCCC TCT GGGGAGAGGG TTAGTGTAAGGGGAA fabI 1751284 - 1752072 + | enoyl-(acyl carrier protein) reductase TERM 2144 1752092 - 1752112 + F 93 -12.5 -3.71149 | opp_overlap 1752092 1752089, overlap 1752093 TCTGTTGGTAAATAT TGGGCGGCG TTC TGCCGCCCG TTATCTCTGTTATAC TERM 2145 1752093 - 1752111 + F 84 -13.8 -2.81966 | opp_overlap 1752092 1752089, overlap 1752092 CTGTTGGTAAATATT GGGCGGCG TTC TGCCGCCC GTTATCTCTGTTATA TERM 2146 1752708 - 1752719 + G 75 -4.4 -4.75309 | opp_overlap 1752708 CTGTGTAATCATTAA CCAA ATCA TTGG TTTTATTGGCTTTCA yciW 1752217 - 1753344 + | putative oxidoreductase TERM 2147 1753706 - 1753693 - g 72 -4.5 -4.62336 | opp_overlap 1753693 AGTTCAGGGCAAAAA TGACC GTCT GGCCA TCGTTCCTGATCATC TERM 2148 1755161 - 1755172 + G 72 -7.2 -4.15222 | opp_overlap 1755160 1755161 CGTTTGGTTGATAAC GGCG CTAT CGCC TTTATTCCGGCACCT rnb 1753412 - 1755346 + | exoribonuclease II TERM 2149 1755357 - 1755381 + T 90 -10 -4.42062 | overlap 1755337 CGTAATCTCCTTTCA CGGCCTATTC CTCAT GGATGGGCCG TTTATTTCCCCGCTC SBO_1777 1755707 - 1755525 - | putative IS1 encoded protein insB 1755782 - 1756285 + | IS1 ORF2 yciR 1756340 - 1758325 + | RNase II stability modulator SBO_1780 1758735 - 1759484 + | putative DEOR-type transcriptional regulator osmB 1759753 - 1759971 + | lipoprotein TERM 2150 1760069 - 1760088 + T 100 -13.6 -5.0916 | opp_overlap 1760062 1760069 GTAAAATATTCGAAA GCCACGGA TATA TCCGTGGC TTTTTATGTTAACCG TERM 2151 1760088 - 1760069 - T 100 -13.6 -3.71687 | opp_overlap 1760069, overlap 1760062 GTAAAATATTCGAAA GCCACGGA TATA TCCGTGGC TTTTTATGTTAACCG yciH 1760426 - 1760097 - | translation initiation factor Sui1 pyrF 1761160 - 1760423 - | orotidine 5'-phosphate decarboxylase yciM 1762522 - 1761353 - | hypothetical protein TERM 2152 1761715 - 1761729 + g 70 -7.1 -4.08945 | CGCGTTGCAGGAATT CTGCC CATTC GGCAG TTTTACCCAACTGCT yciS 1762837 - 1762529 - | hypothetical protein pgpB 1763750 - 1762986 - | phosphatidylglycerophosphatase B ribA 1763920 - 1764510 + | GTP cyclohydrolase II TERM 2153 1764514 - 1764488 - T 75 -6.6 -4.44974 | overlap 1764460 1764489 CCAAAGCCGAGAAAA TGGGTCATTTGC TGA ACAAATAACCCT CTCGCATTGTGGAAT TERM 2154 1764513 - 1764489 - T 71 -10.1 -3.26262 | overlap 1764488 CAAAGCCGAGAAAAT GGGTCATTTGC TGA ACAAATAACCC TCTCGCATTGTGGAA TERM 2155 1764567 - 1764533 - T 82 -11.6 -3.34344 | opp_overlap 1764530 1764533 1764560 GCATTGTGGAATTAA TTTGCTTGCCGG AAGCAAAATAA CCGGCAAGCAAA TACTTGTTACTTCAG TERM 2156 1764533 - 1764567 + T 78 -11.6 -2.98947 | opp_overlap 1764533, overlap 1764530 1764560 GCATTGTGGAATTAA TTTGCTTGCCGG AAGCAAAATAA CCGGCAAGCAAA TACTTGTTACTTCAG TERM 2157 1764955 - 1764965 + T 72 -8.2 -3.82433 | opp_overlap 1764954, overlap 1764958 TTTCCCGGCAATCAC CGCC AGC GGCG TTTGCTCCTGCTTAT TERM 2158 1766731 - 1766692 - T 74 -7.3 -4.32034 | gap 2, overlap 1766720 TCATCATCACCAAAA CGATCGA-C-GGTCACCGA GTGG TCAATGACCAGGTCGACCG GTGAGAGCGGGTTAA TERM 2159 1767251 - 1767236 - T 93 -11.8 -3.66643 | CAAAGCAAATGACAA CCCCGC CGCA GCGGGG TCAAGGATCAGTGAG TERM 2160 1768083 - 1768050 - T 73 -9.7 -3.35613 | overlap 1768046 ACAAAAGAGAATATA TTCCGGCACCTTC GCTACATA AAAGGTGCCGAAA ATAACGCAAGAAATT cysB 1769071 - 1768097 - | transcriptional regulator CysB SBO_1790 1769425 - 1769132 - | putative IS1 encoded protein TERM 2161 1769249 - 1769232 - G 100 -10.5 -5.49234 | ATATGCAATAAAAAA GGGCCGC TTTC GCGACCC TGGTAATGCTGCCAA insB 1769500 - 1770003 + | IS1 ORF2 topA 1772655 - 1770058 - | DNA topoisomerase I TERM 2162 1771734 - 1771745 + g 90 -4.4 -5.40072 | CATACAAACGCTGCG CCAT CATC ATGG TTTTTTTCACGCCAA TERM 2163 1771851 - 1771866 + g 74 -6 -4.56775 | TGTCTTCACGTTCCA GCACGC TGTA GCGCGC TTTTTCCAGCAGACT TERM 2164 1772507 - 1772518 + g 70 -4.4 -4.58395 | GTCTTGGTGGAGGTA GAGT CGGC ACTC TTTTTGGCAGCTGAG yciN 1773035 - 1773286 + | hypothetical protein TERM 2165 1773294 - 1773313 + T 95 -11.4 -4.46775 | opp_overlap 1773294 TTGATTAAAGCAAAA CGCGAGGT CTTA GCCTCGCG TTTGTCTTTTACATC TERM 2166 1773313 - 1773294 - T 93 -10.7 -4.58773 | opp_overlap 1773294 TTGATTAAAGCAAAA CGCGAGG TCTTAG CCTCGCG TTTGTCTTTTACATC sohB 1774371 - 1773322 - | putative periplasmic protease TERM 2167 1774251 - 1774263 + g 82 -9.1 -4.2528 | TGTTGACCCGTAACT CGCCA CGC TGGCG TTTATTACGTTGAGC yciK 1774591 - 1775349 + | short chain dehydrogenase btuR 1775398 - 1775937 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2168 1775968 - 1775948 - T 84 -8.3 -4.62872 | opp_overlap 1775945 1775948 ATTAATCTGTAAAAA TGCCGGA TATGACG TCCGGCA TACTTTGATTAACCG yciL 1776849 - 1775977 - | 23S rRNA pseudouridylate synthase B TERM 2169 1776930 - 1776904 - R 75 -11 -3.01712 | opp_overlap 1776895 1776894 TGCTTTTGTGCAACA GTGAGTCAGA ACTTACA TCTGACTCAC TGATAGTAAAGTCTG yciQ 1778955 - 1777060 - | hypothetical protein TERM 2170 1778880 - 1778845 - G 74 -8.4 -3.92324 | gap 1, opp_overlap 1778846 1778847 1778848, overlap 1778847 1778848 GGCTTCAACATCAAA GAGCGAGATCCCTTCTT CAT AAGAAGGGATCTC-CGG GTTTTCTGCATAACT TERM 2171 1778846 - 1778881 + g 81 -8.4 -4.43501 | gap 1, opp_overlap 1778845 1778847 1778848, overlap 1778847 1778848 GCTTCAACATCAAAG AGCG-AGATCCCTTCTT CAT AAGAAGGGATCTCCGGG TTTTCTGCATAACTT TERM 2172 1778878 - 1778847 - G 100 -15.4 -3.55084 | gap 1, opp_overlap 1778846 1778847 1778848, overlap 1778845 1778848 CTTCAACATCAAAGA GCGAGATCCCTTCTT CAT AAGAAGGGATCTC-C GGGTTTTCTGCATAA TERM 2173 1778847 - 1778880 + g 77 -11.9 -3.25378 | gap 1, opp_overlap 1778847 1778845 1778848, overlap 1778846 1778848 CTTCAACATCAAAGA GCG-AGATCCCTTCTT CAT AAGAAGGGATCTCCGG GTTTTCTGCATAACT TERM 2174 1778878 - 1778848 - G 95 -15.6 -2.72568 | opp_overlap 1778847 1778846 1778848, overlap 1778847 1778845 TTCAACATCAAAGAG CGAGATCCCTTCTT CAT AAGAAGGGATCTCC GGGTTTTCTGCATAA TERM 2175 1778848 - 1778879 + g 95 -15.4 -2.54745 | gap 1, opp_overlap 1778847 1778848 1778845, overlap 1778847 1778846 TTCAACATCAAAGAG CG-AGATCCCTTCTT CAT AAGAAGGGATCTCCG GGTTTTCTGCATAAC yciO 1779639 - 1778983 - | hypothetical protein yciV 1780481 - 1779600 - | putative enzyme trpL 1780619 - 1780663 + | trp operon leader peptide TERM 2176 1780707 - 1780725 + F 100 -8.8 -5.75342 | GCAATCAGATACCCA GCCCGC CTAATGA GCGGGC TTTTTTTTGAACAAA TERM 2177 1780780 - 1780770 - g 82 -3.2 -5.20783 | ATGCAAACACAAAAA CCGA CTC TCGA ACTGCTAACCTGCGA TERM 2178 1781337 - 1781326 - g 70 -3.6 -4.6341 | opp_overlap 1781334 ATCAGAAAAAAAACA CCCG CATT CAGG CCAGCCTGTTTGCTC trpE 1780755 - 1782317 + | anthranilate synthase component I TERM 2179 1782891 - 1782873 - g 72 -6.7 -4.15044 | gap 1 GCCTGCTGGAACAAA CGCTG-GC CTGG GCGCAGCG GAAACTAGAGCCAAC TERM 2180 1783782 - 1783755 - g 71 -10.6 -2.88054 | gap 1, opp_overlap 1783780, overlap 1783736 1783754 1783772 1783775 TGTTACAAGGTAAAG GCGAC-GCCGCTC ACG AAGCAGCCGTCGC GGCGAATGTCGCCAT trpD 1782317 - 1783912 + | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 2181 1785183 - 1785171 - g 86 -10.5 -3.89614 | opp_overlap 1785170 1785169 1785167 TGGAAGCGGCACAAA CCGGC TGC GCCGG ACTTGATTTTAATTC trpC 1783913 - 1785274 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 2182 1785415 - 1785397 - g 82 -7.4 -4.58395 | opp_overlap 1785399, overlap 1785400 GTCAGCGCGCAAAAA GATCCTGA ATT TCAGGCTC AGTTCAACGACCTGC trpB 1785286 - 1786479 + | tryptophan synthase subunit beta trpA 1786479 - 1787285 + | tryptophan synthase subunit alpha TERM 2183 1787292 - 1787314 + T 79 -7.6 -4.45261 | overlap 1787293 CGCAGTTAATCCCAC AGCCGCCAGT TCC GTTGGCGGCA TTTTAACTTTCTTTA TERM 2184 1787293 - 1787313 + T 77 -11.1 -3.2553 | overlap 1787292 GCAGTTAATCCCACA GCCGCCAGT TCC GTTGGCGGC ATTTTAACTTTCTTT insB 1788032 - 1787529 - | IS1 ORF2 TERM 2185 1788301 - 1788323 + G 100 -14.2 -4.84017 | overlap 1788302 1788321 ATGCCATGTCCTTAT TGACCCCGTA TAT TACGGGGTCG TTTTTGTGCGGAATT TERM 2186 1788302 - 1788322 + G 100 -15.5 -3.49687 | overlap 1788301 1788321 TGCCATGTCCTTATT GACCCCGTA TAT TACGGGGTC GTTTTTGTGCGGAAT SBO_1808 1788107 - 1788340 + | putative IS1 encoded protein yciD 1788975 - 1788337 - | outer membrane protein W TERM 2187 1788916 - 1788898 - G 82 -3 -5.28176 | overlap 1788900 TGCACGCATAAAAAA TTCGCCTG CTT CATGCGCA AAGGCACTGCCAGAA yciC 1789332 - 1790075 + | hypothetical protein TERM 2188 1790414 - 1790398 - g 72 -4.3 -4.7254 | overlap 1790399 1790410 ATGGGTGATGAAAAA GCCGCTA ATT CAGCGGA TGCTGAGTAAAGAAC yciB 1790105 - 1790644 + | intracellular septation protein A TERM 2189 1790696 - 1790730 + F 90 -10.8 -4.22948 | overlap 1790702 CCTCTGTTCTCCTCA GGAAAATCATAGTAGC ATC GCGCCTGTGATTTTCC TTTTAAGTCGGTTTT yciA 1790749 - 1791147 + | acyl-CoA thioester hydrolase TERM 2190 1791181 - 1791148 - T 100 -16.9 -3.14564 | opp_overlap 1791150 1791157, overlap 1791150 1791157 TTACCTGTTGAGTAA TAGTCAAAAGCCTCC GGTC GGAGGCTTTTGACTT TCTGCTTACTGAATT TERM 2191 1791179 - 1791150 - T 100 -19.5 -3.13522 | opp_overlap 1791150 1791157, overlap 1791148 1791157 ACCTGTTGAGTAATA GTCAAAAGCCTCC GGTC GGAGGCTTTTGAC TTTCTGCTTACTGAA TERM 2192 1791150 - 1791179 + T 100 -19.5 -4.08144 | opp_overlap 1791150 1791148 1791157, overlap 1791157 ACCTGTTGAGTAATA GTCAAAAGCCTCC GGTC GGAGGCTTTTGAC TTTCTGCTTACTGAA TERM 2193 1791157 - 1791172 + T 93 -10.4 -4.40173 | opp_overlap 1791157 1791150 1791148, overlap 1791150 GAGTAATAGTCAAAA GCCTCC GGTC GGAGGC TTTTGACTTTCTGCT TERM 2194 1791172 - 1791157 - T 90 -10.4 -4.29325 | opp_overlap 1791150 1791157, overlap 1791150 1791148 GAGTAATAGTCAAAA GCCTCC GGTC GGAGGC TTTTGACTTTCTGCT tonB 1791915 - 1791187 - | transport protein TonB TERM 2195 1791273 - 1791283 + g 81 -6.8 -4.62069 | GCTCATAACGCCATC TGCG CAT CGCA TTTTTCACCTCACGC yciI 1792130 - 1792426 + | YciI-like protein SBO_1815 1793187 - 1792474 - | IS600 ORF2 SBO_1816 1793630 - 1793328 - | IS600 ORF1 TERM 2196 1793710 - 1793740 + H 76 -9.1 -3.74178 | opp_overlap 1793713, overlap 1793716 TAGAGATTCAATATT TAAGGGCACGGTT TTTGC AACCGTGTTCTTG TTTGGCCTTTCCTTA TERM 2197 1793716 - 1793734 + H 79 -8.9 -4.1023 | opp_overlap 1793713, overlap 1793710 TTCAATATTTAAGGG CACGGTT TTTGC AACCGTG TTCTTGTTTGGCCTT TERM 2198 1794617 - 1794627 + G 81 -6.8 -4.59109 | TTCGGTCATTATTTC CGGT ATT ACCG TTTTTGCCACATCTA kch 1793994 - 1795247 + | voltage-gated potassium channel TERM 2199 1795271 - 1795299 + F 72 -10.3 -2.86961 | opp_overlap 1795270 1795266 1795265 1795271 1795274, overlap 1795271 1795274 GACGGAAGAGTAAAC TTATTGGGCACCG CAA TGGTGCCCAGTAC ATTTAGATATTGTAG TERM 2200 1795271 - 1795300 + F 72 -8.7 -3.79071 | gap 1, opp_overlap 1795270 1795266 1795265 1795271 1795274, overlap 1795271 1795274 GACGGAAGAGTAAAC T-TATTGGGCACCG CAA TGGTGCCCAGTACA TTTAGATATTGTAGA TERM 2201 1795274 - 1795296 + F 76 -12 -2.67958 | opp_overlap 1795271 1795270 1795266 1795265 1795274, overlap 1795271 1795271 GGAAGAGTAAACTTA TTGGGCACCG CAA TGGTGCCCAG TACATTTAGATATTG TERM 2202 1796151 - 1796174 + G 74 -3 -5.00616 | overlap 1796155 TCATTGCCGATTGAT GCTCGACTCC GCCG GGAGTGTGGC TTTTTTCCGCAGCCC TERM 2203 1796411 - 1796440 + G 78 -8.5 -4.2461 | opp_overlap 1796413, overlap 1796414 1796415 TGATGGCGCGTATGG AAGGCCCCATCGC CACC GCGATGGGGATTA TTTATTCCTGCGACT TERM 2204 1796414 - 1796437 + G 95 -12.4 -4.24413 | opp_overlap 1796413, overlap 1796411 1796415 TGGCGCGTATGGAAG GCCCCATCGC CACC GCGATGGGGA TTATTTATTCCTGCG TERM 2205 1796415 - 1796436 + G 100 -15.9 -3.13925 | opp_overlap 1796413, overlap 1796414 1796411 GGCGCGTATGGAAGG CCCCATCGC CACC GCGATGGGG ATTATTTATTCCTGC TERM 2206 1797037 - 1797049 + G 78 -9.1 -3.88577 | overlap 1797034 CCATTATGGCAACGT GTCGC CGA GCGAC TGTTTTACTTCTTCA cls 1795618 - 1797078 + | cardiolipin synthetase SBO_1819 1797113 - 1797442 + | dsDNA-mimic protein TERM 2207 1797485 - 1797466 - T 100 -13.6 -4.56597 | opp_overlap 1797466 TTTCGGCGTGAAAAA GGGCTGAC AACT GTCAGCCC TTATTGTGTTTAAAG TERM 2208 1797466 - 1797485 + T 100 -13.6 -4.03586 | opp_overlap 1797466 TTTCGGCGTGAAAAA GGGCTGAC AACT GTCAGCCC TTATTGTGTTTAAAG oppF 1798499 - 1797495 - | hypothetical protein TERM 2209 1797643 - 1797661 + g 93 -8.8 -4.95547 | GGCGACGGTAATTCC CCTTCCAG TAA CTGGATGG TTTTGTTCTTCTCCA oppD 1799509 - 1798496 - | oligopeptide transporter ATP-binding component oppC 1800429 - 1799521 - | hypothetical protein TERM 2210 1800397 - 1800409 + g 100 -9.1 -5.1963 | TTCACTGAAATTTTC CAGCG TCT CGCTG TTTTTCTTACTTAAC oppB 1801364 - 1800444 - | oligopeptide transporter permease TERM 2211 1800523 - 1800506 - G 74 -2.7 -4.93877 | overlap 1800514 1800517 TGGCATTAAACAAAA TGGTTAA AGCA CCAACCA GGATGGTCAGGCTTA TERM 2212 1800955 - 1800937 - G 70 -4.4 -4.5442 | opp_overlap 1800937, overlap 1800938 1800939 GGTGCAACCACAAAA CTGGGGAT AAC AACCCCGG TCATTGCCAGCCCCA TERM 2213 1801447 - 1801407 - R 82 -7 -4.87786 | gap 2, opp_overlap 1801415, overlap 1801408 1801412 1801414 GTAATGCGATAAAAA TCAGACACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTAT-TGC CATTAGTGCTTCACA TERM 2214 1801446 - 1801408 - R 79 -10.5 -3.51948 | gap 2, opp_overlap 1801415, overlap 1801407 1801412 1801414 TAATGCGATAAAAAT CAGACACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTAT-TG CCATTAGTGCTTCAC TERM 2215 1801443 - 1801412 - R 81 -12.4 -3.22077 | gap 1, opp_overlap 1801415, overlap 1801408 1801407 1801414 GCGATAAAAATCAGA CACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTA TTGCCATTAGTGCTT TERM 2216 1801442 - 1801414 - R 100 -15.3 -3.16187 | opp_overlap 1801415, overlap 1801412 1801408 1801407 GATAAAAATCAGACA CCGTGGAGCAGGA CAC TCCTGCCCCACGT ATTGCCATTAGTGCT TERM 2217 1801415 - 1801441 + r 100 -16.6 -3.10464 | opp_overlap 1801414 1801412 1801408 1801407 ATAAAAATCAGACAC CGTGGAGCAGGA CAC TCCTGCCCCACG TATTGCCATTAGTGC oppA 1803081 - 1801450 - | oligopeptide transport periplasmic binding protein TERM 2218 1803259 - 1803281 + r 73 -7.8 -4.08557 | TATGTCGATTCGTAC TGTGTCTC CCCTGTC GAGACACA TTATTCTTTCGCGAC insB 1804275 - 1803772 - | IS1 ORF2 TERM 2219 1804562 - 1804579 + G 77 -8.4 -4.05788 | opp_overlap 1804562, overlap 1804576 TAATGACGAAGTAAA CGGAGC ATGGCA GCTCCG TTTCATTTGAAAGGA TERM 2220 1804579 - 1804562 - g 74 -8.4 -3.98113 | opp_overlap 1804562 1804576 TAATGACGAAGTAAA CGGAGC ATGGCA GCTCCG TTTCATTTGAAAGGA SBO_1826 1804350 - 1804589 + | putative IS1 encoded protein ychE 1805243 - 1804596 - | hypothetical protein adhE 1805721 - 1808396 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2221 1808392 - 1808379 - f 83 -4.5 -5.28826 | opp_overlap 1808379 AAAGCTGAGAAAAAA GCGAA AAAA TCCGC TTAATCAGTAGCGCT TERM 2222 1808491 - 1808512 + F 93 -9.4 -4.77567 | opp_overlap 1808491 ACTGAGGCACTATAA CGGCTTCC ACAACA GGGAGCCG TTTTCTTATGCCACT SBO_1829 1808644 - 1808874 + | hypothetical protein TERM 2223 1809360 - 1809334 - gT 95 -9.3 -4.77165 | opp_overlap 1809337 GTGTTCATAACAAAA CGCCCCCGACC ATCAA GGCCGAGGTCG GTTAAGATATCAAAA SBO_1830 1808826 - 1809365 + | hypothetical protein tdk 1810316 - 1809699 - | thymidine kinase TERM 2224 1811257 - 1811243 - g 77 -7.1 -4.55128 | ACGGCGAAACTAAAA CCTGG ACTGG CCAGG GCCGTACTCCAGCTG hns 1810921 - 1811334 + | global DNA-binding transcriptional dual regulator H-NS TERM 2225 1811362 - 1811378 + T 100 -13.7 -5.55769 | opp_overlap 1811362 TGCAATTGCTAAAAA TCCCGCC ATC GGCGGGA TTTTTTATTGTCCGG TERM 2226 1811378 - 1811362 - T 100 -13.7 -4.62471 | opp_overlap 1811362 TGCAATTGCTAAAAA TCCCGCC ATC GGCGGGA TTTTTTATTGTCCGG TERM 2227 1811430 - 1811451 + T 79 -10.1 -3.76224 | opp_overlap 1811430 TAAGCTATAAAAAAA CGGCGTCGA TTGT TCAACGCCG TTTCGTGGATAACAC TERM 2228 1811451 - 1811430 - T 100 -12.3 -5.66684 | opp_overlap 1811430 TAAGCTATAAAAAAA CGGCGTCGA TTGT TCAACGCCG TTTCGTGGATAACAC galU 1812386 - 1811478 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 2229 1811685 - 1811695 + g 70 -4.6 -4.56597 | AATTTCATCACCAGC TCCC GGA GGGG TTTTTGCCAGCAACG hnr 1813601 - 1812588 - | response regulator of RpoS ychK 1814637 - 1813693 - | hypothetical protein ychJ 1814711 - 1815169 + | hypothetical protein TERM 2230 1816016 - 1816028 + G 77 -6.9 -4.44448 | GCTATACAAAGTACT GGCGC AAC GCGTC TTTGTTTACGGTAAT purU 1815219 - 1816061 + | formyltetrahydrofolate deformylase TERM 2231 1816644 - 1816629 - T 100 -8.2 -5.24129 | opp_overlap 1816629 CGTGCCCATAAAAAA CCCCGC CGAA GCAGGG TCTATGTGAACTAAA narI 1817343 - 1816666 - | nitrate reductase 1 cytochrome b(NR), gamma subunit narJ 1818053 - 1817343 - | nitrate reductase 1 delta subunit, assembly function TERM 2232 1817916 - 1817942 + g 73 -9.5 -3.5771 | opp_overlap 1817921, overlap 1817908 1817919 CGTTAAATCGCGCAG GAAAATGCCCA GCGCA TGGGCATCTTC TTTCGACAGATTTTT TERM 2233 1817937 - 1817921 - G 76 -8 -4.25848 | opp_overlap 1817919 1817916 1817908 AATCGCGCAGGAAAA TGCCCA GCGCA TGGGCA TCTTCTTTCGACAGA narH 1819588 - 1818050 - | nitrate reductase 1 beta subunit TERM 2234 1819491 - 1819505 + g 75 -5.6 -4.60041 | TATTCCACGCCTTCA CGGCTG GTC CAGACG TTTTTACAGGTAACT narG 1823328 - 1819585 - | nitrate reductase 1 alpha subunit TERM 2235 1820678 - 1820712 + g 79 -3.5 -5.10077 | gap 1, overlap 1820655 ACGACCATAATGTGT GGCGCGGTTTTACCTG GGAT CAGGTCGCACT-CGCC TTTTTTCCAGTCTTT TERM 2236 1820927 - 1820914 - G 72 -6.7 -4.1552 | CAGCGGGTGAATAAA CGGAT GCAT ATCCG AAGTATTCATGTCGT TERM 2237 1823042 - 1823061 + g 76 -10.6 -3.32769 | opp_overlap 1823022, overlap 1823036 CAGGAGTAGCTGGCA CCGCGCGG GCAG CCGCGAGG TTCATGGTTTGGCAG TERM 2238 1823697 - 1823679 - R 100 -12.4 -5.43866 | overlap 1823667 TAACGCTTAAAAAAA GCGCGACA TCA TGCCGCGC AAAGGATAATCAAAT narK 1825235 - 1823844 - | nitrite extrusion protein TERM 2239 1825049 - 1825039 - G 81 -6.8 -4.67038 | opp_overlap 1825039 GTCGTAAAATTAAAA CCGA CTT TCGG TAAGTTCACCGCAAC TERM 2240 1825368 - 1825386 + H 74 -5.4 -4.60487 | opp_overlap 1825383, overlap 1825370 TAGTGAGTACAGTGA TTTCATAA AAA TTATGAGA TTTTTCACGGTGCTG TERM 2241 1826607 - 1826631 + G 79 -12.1 -3.04792 | AGTACGGTATTTTGC TGGCGACCCTG CCG CAGGGGCGTCA TCTTAGCCATGATCA TERM 2242 1826789 - 1826814 + G 74 -8.3 -3.92542 | TCTATTGCCCAATCT CTCTCTTGCAT GAAG ATGCAGGTGAG TTGTTTACAGATGCA TERM 2243 1827296 - 1827319 + G 70 -6 -4.15044 | gap 1, opp_overlap 1827296 CGCCGTCGTGAATCA GGTGGC-ACCG AAG TGGTGGTCACC TTTATTCCCGAAAAA narX 1825574 - 1827370 + | nitrate/nitrite sensor protein NarX narL 1827363 - 1828013 + | transcriptional regulator NarL ychP 1829267 - 1828014 - | hypothetical protein ychN 1829592 - 1829945 + | hypothetical protein chaC 1830705 - 1829989 - | cation transport regulator TERM 2244 1830729 - 1830741 + r 73 -4.1 -4.7871 | GCGACAACTTTTTGG TGTCT TCC GGACA TTTTTACTGCTCATT chaB 1831072 - 1830842 - | cation transport regulator TERM 2245 1830931 - 1830952 + g 72 -6.5 -4.30253 | overlap 1830934 GCGCGGTTTCTTCGC GACTGGCGT CATC ACGCCGATC TTCTTTATCTTTATA chaA 1831342 - 1832442 + | calcium/sodium:proton antiporter TERM 2246 1832781 - 1832740 - f 80 -6.5 -4.78848 | gap 1, overlap 1832776 1832777 1832778 GCTGGAAAGAGAAAA CCCCCG-CACGTTGAGAGGT AAA ACCTGACAACAAAACGGGGG CTAATCTTGAAACCA TERM 2247 1832998 - 1832963 - f 76 -7.5 -4.21768 | gap 1, overlap 1832991 GAAGTAAGGTGAAAA CGGGCGTCAGGCTGCC GTGAT GGCAATATG-CGCCCG AAACCGGCCGCAGGG TERM 2248 1833030 - 1833003 - f 76 -12 -2.72263 | opp_overlap 1833003 1833004, overlap 1832991 1833002 ATATGCGCCCGAAAC CGGCCGCAGG GGTAACAG CCTGCGGCCA TTTTTGTCTTTATCT TERM 2249 1833003 - 1833030 + F 100 -9.8 -5.26155 | opp_overlap 1832991 1833003 1833002, overlap 1833004 ATATGCGCCCGAAAC CGGCCGCAGG GGTAACAG CCTGCGGCCA TTTTTGTCTTTATCT TERM 2250 1833004 - 1833029 + F 95 -13.3 -3.73253 | opp_overlap 1832991 1833003 1833002, overlap 1833003 TATGCGCCCGAAACC GGCCGCAGG GGTAACAG CCTGCGGCC ATTTTTGTCTTTATC TERM 2251 1833316 - 1833275 - g 75 -4.3 -4.78848 | gap 1, opp_overlap 1833276 GCTGGAAAGAGAAAA CCCCCGCAC-GTTGAGAGGT TTA ACCTGACAATAGAACGGGGG CTAATCTTGAAACCA SBO_1851 1833215 - 1833490 + | hypothetical protein TERM 2252 1833534 - 1833499 - T 76 -7.5 -4.21768 | gap 1, overlap 1833527 GAAGTAAGGTGAAAA CGGGCGTCAGGCTGCC GTGAT GGCAATATG-CGCCCG AAACCGGCCGCAGGG TERM 2253 1833540 - 1833565 + T 100 -13.3 -5.4251 | opp_overlap 1833527 1833539 1833538 TATGCGCCCGAAACC GGCCGCAGG GGTAACAG CCTGCGGCC TTTTTTGTATCTGGC TERM 2254 1833594 - 1833616 + T 80 -6.3 -4.85782 | opp_overlap 1833594 GCACCCATGAAAAAA GTCTTAACG CAGAA CGCTAAGAC TTTATTTTTCAAGCA TERM 2255 1833616 - 1833594 - T 100 -9.2 -5.1675 | opp_overlap 1833594 GCACCCATGAAAAAA GTCTTAACGC AGA ACGCTAAGAC TTTATTTTTCAAGCA kdsA 1834493 - 1833639 - | 2-dehydro-3-deoxyphosphooctonate aldolase ychA 1835339 - 1834701 - | hypothetical protein SBO_1854 1835735 - 1835343 - | putative transcriptional regulator TERM 2256 1835749 - 1835765 + r 73 -10.1 -3.31792 | ATTGATAATAGCGGC CGAGCGT TAC GCGCTCG TTATCACCATAGTCA hemK 1836565 - 1835732 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase prfA 1837647 - 1836565 - | peptide chain release factor 1 TERM 2257 1836833 - 1836850 + g 79 -4.1 -5.1523 | CGAGCACCGAGCACT GAAAGCG CCTT CGCTTTG TTTTTATGTTGTGAA hemA 1838945 - 1837689 - | glutamyl-tRNA reductase TERM 2258 1839556 - 1839531 - g 73 -9.1 -3.5882 | GAGATGATTGGCAAA TTGACCGGAAT GCCA ATTCCGCTCAA CAGCTTGCGCCAGTG TERM 2259 1839707 - 1839697 - g 75 -6.8 -4.371 | overlap 1839698 GTTATGACACCAAAA CGCA ACC TGCG ATGCCAGCCAATATG lolB 1839159 - 1839782 + | outer membrane lipoprotein LolB TERM 2260 1839985 - 1839997 + G 76 -9.1 -3.72027 | AGATAACCTGATCGT TCGCG CAG CGCGA TTGTTGATGAAAACT ychB 1839782 - 1840633 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2261 1840653 - 1840667 + F 75 -10 -3.62522 | GGCAAGCTGAGTTTC GGTGAC AAC GTCACC TTGTTCCAGACGTTG prsA 1840784 - 1841731 + | ribose-phosphate pyrophosphokinase TERM 2262 1841750 - 1841763 + F 100 -9.5 -5.76633 | opp_overlap 1841750 1841748 AACCCGGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2263 1841763 - 1841750 - f 73 -9.5 -3.34894 | opp_overlap 1841750, overlap 1841748 AACCCGGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA ychM 1841883 - 1843535 + | putative sulfate transporter YchM TERM 2264 1843573 - 1843544 - T 74 -11.5 -2.87963 | overlap 1843562 TTTATAAGTACGAGA TTGACCAGTCAGC GCAA ACTGACTGGTCAG CAAACTGCATTATTT ychH 1843868 - 1843590 - | hypothetical protein TERM 2265 1844060 - 1844076 + H 73 -2.2 -5.24129 | CAATTATTACGTTAT CTGCAT TTGAT ACGCAG TTTTTTGTCAAGCGG pth 1844146 - 1844730 + | peptidyl-tRNA hydrolase TERM 2266 1845308 - 1845297 - g 72 -5.8 -4.38927 | CGCGTACAGAAGAAA GCCA AAGG TGGC GATAAAGACGCGAAA ychF 1844847 - 1845938 + | translation-associated GTPase TERM 2267 1846021 - 1845994 - T 75 -11.4 -3.10537 | opp_overlap 1845999, overlap 1845999 GAGCGCAAAAGTATA TAAAATCCACGC AATT GCGTGGATTTTT CATTTCACCGAGTCG TERM 2268 1846016 - 1845999 - T 95 -11.3 -4.6709 | opp_overlap 1845999, overlap 1845994 CAAAAGTATATAAAA TCCACGC AATT GCGTGGA TTTTTCATTTCACCG TERM 2269 1845999 - 1846016 + T 100 -11.3 -4.98531 | opp_overlap 1845999 1845994 CAAAAGTATATAAAA TCCACGC AATT GCGTGGA TTTTTCATTTCACCG insB 1846554 - 1846051 - | IS1 ORF2 SBO_1867 1850490 - 1850182 - | IS600 ORF2 SBO_1868 1851323 - 1850484 - | IS911 ORF2 TERM 2270 1850892 - 1850903 + g 77 -5.8 -4.63218 | opp_overlap 1850888 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 2271 1851244 - 1851264 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SBO_1869 1853791 - 1851863 - | DNA-binding transcriptional regulator DhaR TERM 2272 1852535 - 1852523 - G 72 -6.9 -4.15788 | AATCTTTTCAAGAAA CAGCG TGC CGCCG TGCGCCAGTTCCAGC TERM 2273 1852901 - 1852889 - G 79 -4.7 -4.90302 | opp_overlap 1852889 GAGCAACAAAATAAA GCTGG TTC CCTGC GTTTCTATTATCGGT TERM 2274 1853895 - 1853875 - H 70 -9.9 -2.97934 | opp_overlap 1853874 1853875 1853877, overlap 1853877 ACATTCATTAAAGCA TATGTTTCA CTA TGAAACATA ATTTGGGCTAATTTT SBO_1870 1853980 - 1855119 + | dihydroxyacetone kinase subunit DhaK TERM 2275 1855675 - 1855619 - gf 73 -9.4 -3.5774 | gap 1, opp_overlap 1855618 1855654, overlap 1855610 ATGCAAGCCCGCAAA GGCCGCGCCAGTTATCTCGGTGAAC GCAGTATT GGTCACCAGGATC-CCGGCGCGACC TCGGTGATGTTTATG SBO_1871 1855091 - 1855723 + | dihydroxyacetone kinase ADP-binding subunit TERM 2276 1856247 - 1856262 + G 74 -8.2 -4.00066 | overlap 1856246 GGCCTGCATGTACGT CCGGCC TCCC GGCTGG TTTATACCTTATCGA ycgC 1855731 - 1857152 + | dihydroxyacetone kinase subunit M SBO_1873 1857681 - 1857511 - | putative IS1 encoded protein insB 1857774 - 1858277 + | IS1 ORF2 TERM 2277 1859882 - 1859825 - T 71 -10.6 -2.74563 | gap 1, opp_overlap 1859841 1859880, overlap 1859841 1859880 CCCACACCTTAACCA GCGCTTACT-CCGACAACGTCATTCGG CTTCT CCGGATGGCGTTGTCGGCAGATAACAC CATAGCTATGGTGTT TERM 2278 1859841 - 1859865 + T 71 -10 -3.29511 | opp_overlap 1859825 1859841 CGCTTACTCCGACAA CGTCATTCGG CTTCT CCGGATGGCG TTGTCGGCAGATAAC TERM 2279 1859880 - 1859895 + T 76 -7.6 -4.36914 | opp_overlap 1859825 1859880 GTTGTCGGCAGATAA CACCAT AGCT ATGGTG TTTTCTACACAGCCG ycgY 1860340 - 1859900 - | hypothetical protein TERM 2280 1860476 - 1860507 + r 70 -9.4 -3.33583 | opp_overlap 1860477, overlap 1860477 CGTTCTGATGTGAAA AGCGGATAGCGGCA TCTG TATCGCTATCCGCC TTATGAAAATCTTAT TERM 2281 1860506 - 1860477 - R 95 -12.9 -4.13767 | opp_overlap 1860477 1860476 GTTCTGATGTGAAAA GCGGATAGCGGCA TCTG TATCGCTATCCGC CTTATGAAAATCTTA TERM 2282 1860477 - 1860506 + r 81 -12.9 -2.59668 | opp_overlap 1860477, overlap 1860476 GTTCTGATGTGAAAA GCGGATAGCGGCA TCTG TATCGCTATCCGC CTTATGAAAATCTTA ymgE 1860773 - 1860519 - | hypothetical protein ycgR 1860974 - 1861708 + | hypothetical protein mltE 1862435 - 1861710 - | murein transglycosylase E TERM 2283 1862908 - 1862881 - gH 72 -4.9 -4.67982 | gap 1 CGTTACGCAATAAAA CCTTCACCATTG AATGG CAAGGG-GAAGG CCCGACATGTCAGAC ldcA 1862421 - 1863335 + | L,D-carboxypeptidase A SBO_1881 1863430 - 1865166 + | potassium/proton antiporter TERM 2284 1865445 - 1865419 - T 79 -10.3 -3.53224 | opp_overlap 1865421 CAGGTTCCGGGGAAA TAGTGTCCATC CTTTT AATGGACACTA TCATGGGCAATGGCT dadA 1867920 - 1866622 - | D-amino acid dehydrogenase small subunit TERM 2285 1868839 - 1868827 - g 76 -4.1 -5.01732 | AACGCCCGCAAAAAA TCTCG CTG CAAGA AGAGAAAGCCCGGCA ycgB 1868250 - 1869782 + | hypothetical protein TERM 2286 1869796 - 1869811 + T 71 -10.4 -2.67021 | opp_overlap 1869796, overlap 1869795 AAAAACAACAAAAAA CCCCTC GTTT GAGGGG GTTGCTCTTTAAACG TERM 2287 1869811 - 1869796 - T 100 -10.4 -5.80727 | opp_overlap 1869796 1869795 AAAAACAACAAAAAA CCCCTC GTTT GAGGGG GTTGCTCTTTAAACG fadR 1870553 - 1869834 - | fatty acid metabolism regulator TERM 2288 1871832 - 1871850 + G 80 -5.3 -4.88736 | gap 1 CGAATCTCTGCCATT CACCG-CA CTGT TGACGGTG TTTTTCTCGGTAGTC nhaB 1870774 - 1872315 + | sodium/proton antiporter TERM 2289 1872349 - 1872322 - f 79 -9.8 -3.79113 | opp_overlap 1872320 1872326, overlap 1872326 ACGCTTTGATAACAA CTTACCGGGCAT ATAA ATGCCCGGTTTG CCTTTTCGCCCGATA TERM 2290 1872326 - 1872345 + F 100 -13.6 -3.92659 | opp_overlap 1872322 1872326, overlap 1872320 TTTGATAACAACTTA CCGGGCAT ATAA ATGCCCGG TTTGCCTTTTCGCCC TERM 2291 1872345 - 1872326 - f 83 -13.6 -2.68806 | opp_overlap 1872326 1872320, overlap 1872322 TTTGATAACAACTTA CCGGGCAT ATAA ATGCCCGG TTTGCCTTTTCGCCC TERM 2292 1872834 - 1872867 + G 81 -4.5 -5.1287 | gap 1, overlap 1872837 TGCCGCAAGTGTTTG TCGCCTCTGGCGATTG CGC CGAGCGTCAGTGG-GA TTTTTTAGGTCTGGA dsbB 1872461 - 1872991 + | disulfide bond formation protein B TERM 2293 1873000 - 1873017 + T 87 -6.9 -5.14965 | overlap 1873002 1873006 1873008 TCGCTAATCCATTCG GCGCTCC TGCG GGAGCAC TTTTTTCCTGCCGCT umuD 1874723 - 1874304 - | DNA polymerase V subunit UmuD insB 1875922 - 1875419 - | IS1 ORF2 SBO_1892 1875997 - 1876221 + | putative IS1 encoded protein ycgJ 1876569 - 1876201 - | hypothetical protein TERM 2294 1877422 - 1877407 - g 74 -2.4 -5.04222 | overlap 1877409 GAAGGAAAGGAAAAA GCGCCG CGTC CAGCTC CCGCACCACAGGCTC minC 1877095 - 1877790 + | septum formation inhibitor minD 1877814 - 1878626 + | cell division inhibitor MinD minE 1878630 - 1878896 + | cell division topological specificity factor MinE TERM 2295 1878921 - 1878948 + F 100 -11.4 -4.76041 | overlap 1878922 AAAAACGCATTTATC TTCAAGGCAGAG TCAT TTCTGCCTTGAG TTTTTCATCCCTCTC TERM 2296 1878922 - 1878947 + F 85 -12.7 -3.44902 | overlap 1878921 AAAACGCATTTATCT TCAAGGCAGAG TCAT TTCTGCCTTGA GTTTTTCATCCCTCT TERM 2297 1879171 - 1879190 + F 90 -7 -5.40072 | overlap 1879172 CCATAGGATGAGGTT TCCCGCCG TAAC TGGCGGGC TTTTTTTGCCCCAGA TERM 2298 1879172 - 1879189 + F 83 -10.5 -3.83561 | overlap 1879171 CATAGGATGAGGTTT CCCGCCG TAAC TGGCGGG CTTTTTTTGCCCCAG TERM 2299 1879237 - 1879252 + F 84 -10.4 -3.85704 | opp_overlap 1879237 CCCTGTAAACGAAAA CTGCGC CGAA GCGCAG TTTAATCGTTGATGG TERM 2300 1879252 - 1879237 - f 93 -10.4 -4.54727 | opp_overlap 1879237 CCCTGTAAACGAAAA CTGCGC CGAA GCGCAG TTTAATCGTTGATGG SBO_1897 1879975 - 1880259 + | hypothetical protein SBO_1898 1880391 - 1880597 + | hypothetical protein TERM 2301 1880611 - 1880633 + T 100 -12 -5.08824 | AATATTTCATATGTA CCGCGTCG ATGAATA CGACGCGG TTTTTTAGCTAACGG SBO_1899 1881025 - 1880654 - | hypothetical protein SBO_1900 1882243 - 1881107 - | hypothetical protein TERM 2302 1881209 - 1881226 + g 82 -3.4 -5.20216 | gap 1, overlap 1881200 GCTATATTGCGCCCA GGCGTCA ATGTA TG-CGCC TTTTTTACTGATGTC insB 1882748 - 1882245 - | IS1 ORF2 SBO_1902 1882823 - 1883002 + | putative IS1 encoded protein TERM 2303 1883264 - 1883240 - T 100 -10 -5.05113 | opp_overlap 1883243, overlap 1883243 TCCACATAAATAAAA CAACGGGCGT GTTAT ACGCCCGTTT CAATATTTAACTCAT TERM 2304 1883261 - 1883243 - T 100 -11.7 -4.60302 | opp_overlap 1883243, overlap 1883240 ACATAAATAAAACAA CGGGCGT GTTAT ACGCCCG TTTCAATATTTAACT TERM 2305 1883243 - 1883261 + T 93 -12.4 -3.81539 | opp_overlap 1883243 1883240 ACATAAATAAAACAA CGGGCGTG TTA TACGCCCG TTTCAATATTTAACT icdA 1884537 - 1883287 - | isocitrate dehydrogenase TERM 2306 1884761 - 1884749 - g 77 -2.7 -5.11613 | overlap 1884750 ATACCATGCAAAAAA CTTCT TTT AGAAA TCACCAGGTTAAGCG ymfC 1884739 - 1885362 + | 23S rRNA pseudouridine synthase E SBO_1905 1885372 - 1885833 + | putative phosphohydrolase trmU 1885887 - 1886993 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2307 1887169 - 1887188 + G 75 -5.7 -4.59773 | gap 1, opp_overlap 1887169, overlap 1887169 TATTATTGATATGAA CC-CCAGC TCGAC GCTGGCGG TTTTTGGCGGTAGCG ycfC 1887029 - 1887670 + | hypothetical protein purB 1887674 - 1889044 + | adenylosuccinate lyase TERM 2308 1889052 - 1889083 + F 76 -9.4 -3.6968 | gap 1, overlap 1889053 1889056 TGAAATAAACTCGTA TCAGTGCCGGATGGC GAT GCTGTCCGGC-CTGC TTATTAAGATTATCC TERM 2309 1889053 - 1889082 + F 82 -12.9 -2.81326 | gap 1, overlap 1889052 1889056 GAAATAAACTCGTAT CAGTGCCGGATGGC GAT GCTGTCCGGC-CTG CTTATTAAGATTATC TERM 2310 1889056 - 1889080 + F 70 -9.9 -2.94759 | overlap 1889053 1889052 ATAAACTCGTATCAG TGCCGGATGGC GAT GCTGTCCGGCC TGCTTATTAAGATTA phoP 1889212 - 1889883 + | DNA-binding transcriptional regulator PhoP TERM 2311 1890700 - 1890661 - g 72 -4.3 -4.60041 | gap 1 ACCGATTGTTAAAAA GTGAACG-CGAACGTTAC GACAA ATACCGTACGACGCTCAC CGACCTGACCCATAG TERM 2312 1890734 - 1890724 - g 77 -8.2 -4.13014 | CCCATAGTCTGAAAA CGCC ACT GGCG GTGCTGCAAAGTACG phoQ 1889883 - 1891343 + | sensor protein PhoQ ycfD 1891410 - 1892540 + | hypothetical protein TERM 2313 1892555 - 1892581 + T 100 -15.2 -4.32201 | opp_overlap 1892553, overlap 1892556 AGTTTGGATTTAAGC CGGATGCGGCAT CAC ATGCCGCATCCC TTTTCGCTTACTTCC TERM 2314 1892556 - 1892580 + T 100 -18.7 -3.18598 | opp_overlap 1892553, overlap 1892555 GTTTGGATTTAAGCC GGATGCGGCAT CAC ATGCCGCATCC CTTTTCGCTTACTTC pepT 1893815 - 1892589 - | peptidase T SBO_1913 1894116 - 1893847 - | putative IS1 encoded protein insB 1894191 - 1894694 + | IS1 ORF2 potA 1894842 - 1895978 + | putrescine/spermidine ABC transporter ATPase protein potB 1895962 - 1896825 + | spermidine/putrescine ABC transporter membrane protein TERM 2315 1897022 - 1896989 - f 78 -11.7 -3.11291 | CGTATAACCCCAATA CCCCTCCCCGACTAT CTGA ATGGTCGGGGAGGCA CTTCACGCACAAAAT SBO_1917 1897690 - 1898040 + | putative protein encoded within IS TERM 2316 1898075 - 1898044 - T 72 -5.2 -4.60255 | gap 1, overlap 1898045 1898046 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 2317 1898074 - 1898046 - T 71 -10.3 -2.60776 | overlap 1898044 1898045 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_1918 1899196 - 1898309 - | IS629 ORF2 TERM 2318 1898876 - 1898888 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_1919 1899471 - 1899196 - | IS629 ORF1 SBO_1920 1899701 - 1900975 + | putative protein encoded within IS TERM 2319 1901004 - 1900973 - T 76 -7.5 -4.258 | gap 2, opp_overlap 1900976 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CTATCGTATTGATTG TERM 2320 1901267 - 1901233 - T 77 -10.6 -3.40899 | overlap 1901220 AAGCCTGCAGGAGAA GGCTGGCAACAGATGC AAC GCATCTGCGCCCGGCC AGCATGAAAAATAAC SBO_1921 1901755 - 1901423 - | putative membrane protein, energy transducer TERM 2321 1901975 - 1901986 + r 70 -2.2 -4.93365 | TAACGCGGTAAACCC CGGT GTGT ATCG TTTTTGATTATCCCC SBO_1922 1902740 - 1902342 - | endopeptidase TERM 2322 1902601 - 1902614 + g 79 -2.3 -5.252 | overlap 1902602 GTTGCGTTTGCCAGC TCCAG CTCT CTGGC TTTTTTATCGCGCTG SBO_1923 1903098 - 1902883 - | hypothetical protein TERM 2323 1903127 - 1903103 - R 88 -8.5 -4.84918 | opp_overlap 1903103, overlap 1903098 GTCAGAAACACAAAA CCCCGCCTGGT GCC AACAAACGGGG TTTTTACTTTTATTC TERM 2324 1903103 - 1903127 + r 79 -4.1 -5.17786 | opp_overlap 1903103 1903098 GTCAGAAACACAAAA CCCCGCCTGGT GCC AACAAACGGGG TTTTTACTTTTATTC SBO_1924 1903754 - 1903221 - | putative lysozyme SBO_1925 1904149 - 1903805 - | hypothetical protein TERM 2325 1904433 - 1904410 - R 95 -11 -4.37544 | opp_overlap 1904412 TCACAACAATATAAA GACCACCGGC ACAC ACCGATGGTC CCTTGCGCATGCTTA SBO_1926 1904691 - 1904446 - | hypothetical protein TERM 2326 1905015 - 1905026 + rH 90 -7.2 -5.43866 | overlap 1904997 CCAGCTTCCATTCCT GCCG CTGG CGGC TTTTTTTAGCAATTA TERM 2327 1905046 - 1905056 + rH 80 -6.8 -4.62772 | TTTAGCAATTATGCG GCTG CTC CAGC TTTGTTTGCTTTAAC SBO_1928 1905548 - 1905039 - | hypothetical protein SBO_1927 1905515 - 1905790 + | IS629 ORF1 TERM 2328 1906110 - 1906098 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_1929 1905790 - 1906677 + | IS629 ORF2 SBO_1930 1908137 - 1907058 - | hypothetical protein TERM 2329 1908262 - 1908247 - R 74 -8.2 -3.94933 | GCAATTCGAAAAAGA CCGCGC AGTT GCGCAG AGTGACTACTATGGG TERM 2330 1908331 - 1908352 + r 100 -12.3 -5.40072 | gap 1 TGTTTATTCCTTGCC GCCCGCGTCT CCC AG-CGCGGGC TTTTTTTGCCCACAA TERM 2331 1908389 - 1908372 - R 95 -12.7 -4.30719 | opp_overlap 1908360 TTTGCCCACAAGAAA GCCCCTC CGGA GAGGGGC TGGAGAGTGGCGCTA TERM 2332 1908611 - 1908596 - R 100 -8.2 -6.13 | ACATTTAAAAAAAAA GCCCGC AAAA GCGAGC CAGGGAAAATAAGTG TERM 2333 1908744 - 1908771 + r 72 -8.4 -3.79251 | gap 1, overlap 1908746 GGGGACTTGAACCCC GCGCAGCCAGCTT CGA AGGCTGGC-GCTC TTTCCTGATGAGCTA TERM 2334 1908746 - 1908769 + r 75 -9.6 -3.48024 | gap 1, overlap 1908744 GGACTTGAACCCCGC GCAGCCAGCTT CGA AGGCTGGC-GC TCTTTCCTGATGAGC SBO_1934 1909501 - 1908917 - | putative DNA adenine methyltransferase encoded by prophage SBO_1935 1909948 - 1909661 - | putative DNA adenine methyltransferase encoded by prophage insB 1910345 - 1909950 - | IS1 ORF2 SBO_1937 1910546 - 1910950 + | hypothetical protein TERM 2335 1911026 - 1911014 - gf 74 -3.3 -4.93296 | CTACCAGTATAAAAA TCCTG TGA CTGGA AAATTTCACGGACTC SBO_1938 1910919 - 1911962 + | putative integrase TERM 2336 1912158 - 1912145 - f 81 -3.9 -5.42514 | GGAGAAAGGAAAAAA TTGAA TAAA TTCAA AATCCTGAAAGTGCT potC 1912204 - 1912998 + | spermidine/putrescine ABC transporter membrane protein potD 1912995 - 1914041 + | spermidine/putrescine ABC transporter periplasmic substrate-binding protein TERM 2337 1914073 - 1914050 - T 71 -9.5 -3.22091 | opp_overlap 1914051, overlap 1914051 ACGTTAATTCAGCAA GCGGGCGGT GGTATT ACCGCCCGT TTTTTATTTAGCAAG TERM 2338 1914051 - 1914072 + T 100 -13.7 -5.63517 | opp_overlap 1914050 1914051 CGTTAATTCAGCAAG CGGGCGGTG GTAT TACCGCCCG TTTTTTATTTAGCAA TERM 2339 1914072 - 1914051 - T 80 -13 -2.52933 | opp_overlap 1914051, overlap 1914050 CGTTAATTCAGCAAG CGGGCGGT GGTATT ACCGCCCG TTTTTTATTTAGCAA cobB 1915018 - 1914197 - | NAD-dependent deacetylase TERM 2340 1914951 - 1914940 - G 82 -2.2 -5.41143 | overlap 1914942 1914944 TATCTCTGAAAAAAA TACG CTGA CGCA AACGCTCGCGCAGGC TERM 2341 1914954 - 1914970 + g 75 -4.4 -4.85782 | gap 1, opp_overlap 1914944 1914942 1914954, overlap 1914957 ATACGCTGACGCAAA CGCTCGC GCAG GCGA-CG TTTATTTTTACGAAA ycfX 1915945 - 1915034 - | N-acetyl-D-glucosamine kinase ycfW 1917218 - 1915974 - | outer membrane-specific lipoprotein transporter subunit LolE lolD 1917919 - 1917218 - | lipoprotein transporter ATP-binding subunit ycfU 1919111 - 1917912 - | outer membrane-specific lipoprotein transporter subunit LolC TERM 2342 1918287 - 1918275 - G 84 -10.5 -3.72051 | GGTAATAATGTTAAA CGCCG CAA CGGCG ACAATCAGGCTCAGC TERM 2343 1918381 - 1918394 + g 75 -4.5 -4.77157 | overlap 1918391 CAGTCCTGCCATTTG CTGTC TTCA GGCAG TTTTTGCTGACTTAA TERM 2344 1920028 - 1920043 + G 81 -9 -4.08651 | AGGTACCGTTGCGCC GCCATC TGCT GATGGC TTCTTTGCTTACCGT ycfT 1919373 - 1920446 + | hypothetical protein TERM 2345 1920468 - 1920451 - f 78 -12.7 -2.52543 | opp_overlap 1920451 ACTCCCGCTAAGCCA TCGCCCC AGCC GGGGCGA TTCAATTTGCTAAAC TERM 2346 1920451 - 1920468 + F 85 -12.7 -3.30701 | opp_overlap 1920451 ACTCCCGCTAAGCCA TCGCCCC AGCC GGGGCGA TTCAATTTGCTAAAC TERM 2347 1921693 - 1921678 - g 77 -3.2 -5.07486 | opp_overlap 1921679, overlap 1921679 CAGGCGCAACAAAAA GCGC CGCTGGAT GCGC TGCGTAAGTTCCTCG TERM 2348 1921803 - 1921793 - g 72 -5.4 -4.45544 | opp_overlap 1921802 TCGCACGAATTAAAA TTGC TCC GCAA CGCATTATGCGTCTT mfd 1920574 - 1924020 + | transcription-repair coupling factor TERM 2349 1924050 - 1924029 - f 72 -10.8 -2.79492 | overlap 1924028 CGCTTAATGGTAAAT CGGGGGCG TTTCTG CGCCCCCA TCGGCAACATTTACA TERM 2350 1924285 - 1924245 - g 70 -6.8 -4.11216 | gap 1, opp_overlap 1924250 1924253, overlap 1924246 1924250 1924253 GCGCTACCGGCAAAA GCCA-ACACCTGGCCGCTG CCGC CAGCGGGCAGTCGTCTGGT TGGCGAAAACAAATT TERM 2351 1924279 - 1924250 - g 72 -9.9 -3.37091 | opp_overlap 1924250 1924253, overlap 1924246 1924245 1924253 ACCGGCAAAAGCCAA CACCTGGCCGCTG CCGC CAGCGGGCAGTCG TCTGGTTGGCGAAAA TERM 2352 1924253 - 1924276 + G 77 -12.4 -2.69964 | opp_overlap 1924253 1924250 1924246 1924245, overlap 1924250 GGCAAAAGCCAACAC CTGGCCGCTG CCGC CAGCGGGCAG TCGTCTGGTTGGCGA TERM 2353 1924276 - 1924253 - g 76 -12.4 -2.54586 | opp_overlap 1924250 1924253, overlap 1924250 1924246 1924245 GGCAAAAGCCAACAC CTGGCCGCTG CCGC CAGCGGGCAG TCGTCTGGTTGGCGA ycfS 1924164 - 1925126 + | hypothetical protein TERM 2354 1925170 - 1925144 - T 100 -18.8 -5.93809 | CCTGGATAAAAAAAA TCCCCGCGACAC GGC ATGTCGCGGGGA AAAAATCAGCAGTAG ycfR 1925466 - 1925209 - | hypothetical protein TERM 2355 1925444 - 1925433 - G 70 -5.8 -4.15006 | opp_overlap 1925436 ACATGGAGCTTAAAA TCGC CGCA GCGA TGAGGGTTTTTACGT TERM 2356 1925751 - 1925741 - g 100 -2.4 -5.77853 | AATGTGTAAAAAAAA GCCG TGG CCGC CCAAAAGTGTTCGAC ycfQ 1925629 - 1926339 + | hypothetical protein TERM 2357 1926378 - 1926352 - T 100 -10.1 -5.43866 | TAAGTCGCAAAAAAA GCCCCTCAGCC TGAGC GAATGAGGGGC CAAATTGCAGAGTAC ycfJ 1926940 - 1926401 - | hypothetical protein TERM 2358 1927100 - 1927068 - R 76 -12 -2.60723 | opp_overlap 1927077, overlap 1927067 GGAGTCTGAAGGAAT GCCTGATGCGACGC TTAAC GCGTCTTATCAGGC CTACCGCTCGTACCA ndh 1928471 - 1927167 - | respiratory NADH dehydrogenase ycfP 1929413 - 1928871 - | hypothetical protein ycfO 1930461 - 1929436 - | beta-hexosaminidase TERM 2359 1929567 - 1929557 - G 70 -6.8 -4.08706 | opp_overlap 1929557 CCTTTATGATACAAA CGTG TAA CACG TTCTGCCTTGATCGG thiK 1931296 - 1930472 - | thiamine kinase TERM 2360 1931267 - 1931246 - G 91 -9.4 -4.58685 | AAACTGCGGGAAAAA GCGCGACA GCAATT CGTCGCGC GTGATGGGATTATTA ycfM 1931918 - 1931280 - | hypothetical protein ycfL 1932309 - 1931932 - | hypothetical protein ycfF 1932671 - 1932312 - | purine nucleoside phosphoramidase TERM 2361 1932447 - 1932457 + g 75 -5.4 -4.59773 | TTCGGCAATACCTTC TTGC TCA GCAA TTTTTGCCACTACGG insB 1933698 - 1933195 - | IS1 ORF2 SBO_1960 1933791 - 1933967 + | putative IS1 encoded protein TERM 2362 1935275 - 1935250 - gT 79 -4.7 -4.88736 | gap 1, opp_overlap 1935250 1935253 CAGCATGGAGAAAAA CCACACCA-CGC CTT ACGCTGGTCTGG TGTTTGACATCAATG fhuE 1933934 - 1935970 + | ferric-rhodotorulic acid outer membrane transporter TERM 2363 1936005 - 1935988 - T 100 -12.7 -5.04987 | opp_overlap 1935988 AACACCTGTAAAAAA GGCAGCC ATCT GGCTGCC TTAGTCTCCCCAACG TERM 2364 1935988 - 1936005 + T 81 -12.7 -3.25823 | opp_overlap 1935988 AACACCTGTAAAAAA GGCAGCC ATCT GGCTGCC TTAGTCTCCCCAACG ptsG 1937463 - 1936030 - | glucose-specific PTS system IIBC components TERM 2365 1936619 - 1936636 + g 70 -4 -4.61566 | opp_overlap 1936617 1936619 GCGGAGATCATAATA CCGCCC ACTTTC GCGCGG TTTTCTGGTTTAGCA TERM 2366 1937687 - 1937714 + r 74 -8.4 -3.93057 | opp_overlap 1937681 1937680, overlap 1937688 ATTTCAAACGCGGTT ATTCACCGCCCA ATTT TCGGCGGTGAAC TTTACTCGTTTTAGC TERM 2367 1937688 - 1937713 + r 78 -11.9 -2.95111 | opp_overlap 1937681 1937680, overlap 1937687 TTTCAAACGCGGTTA TTCACCGCCCA ATTT TCGGCGGTGAA CTTTACTCGTTTTAG ycfH 1938556 - 1937759 - | putative metallodependent hydrolase holB 1939571 - 1938567 - | DNA polymerase III subunit delta' TERM 2368 1938788 - 1938800 + g 81 -9.1 -4.09864 | TGGTCACCTGTGCAG CGCCA TGA TGGCG TTTTAGCGCATCCAT TERM 2369 1939166 - 1939152 - G 71 -2.8 -4.7497 | opp_overlap 1939142 GGTAGCCAGGAAAAA CCAG GTTTCTG CTGG TGGCTCTTCAAGCGT TERM 2370 1939522 - 1939532 + g 81 -6.8 -4.59773 | CTTCCGGCCTGATAG CTGG CTA CCAG TTTTTCGAAATCAGG tdk 1940209 - 1939568 - | thymidylate kinase TERM 2371 1939750 - 1939765 + g 91 -11.8 -4.08692 | TACGATCCAGCTCGC CGCGCG CACG CGCGCG TTTTAAGCCAACTTC yceG 1941221 - 1940199 - | hypothetical protein pabC 1942033 - 1941224 - | 4-amino-4-deoxychorismate lyase TERM 2372 1942112 - 1942127 + r 72 -6 -4.55287 | opp_overlap 1942112 AAAGCTAAGAAAAAA GGCCCG CAAG CGGACC TTTTATATGGGTGGG TERM 2373 1942127 - 1942112 - R 100 -8.2 -5.52096 | opp_overlap 1942112 AAAGCTAAGAAAAAA GGCCCG CAAG CGGACC TTTTATATGGGTGGG fabF 1943394 - 1942153 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2374 1942725 - 1942750 + g 74 -10.3 -3.51329 | CATCACGCTCTTTAT CCCACGGGCGG CTCG CCGCTTGCGGG TTATCATTGCGGGTA TERM 2375 1943021 - 1943041 + g 70 -3.9 -4.68384 | overlap 1943026 ATCTTACGTGGACCA CCGTTCATC AGA GATGTGTGG TTTTCTTCGATCAGT TERM 2376 1943446 - 1943474 + r 71 -9.6 -3.15056 | gap 1, opp_overlap 1943447 1943449, overlap 1943444 GGACAAAAAGATAAA ACT-CAGGCGGTC GAAC GACCGCCTGGAGA TGTTCACTTACGCCT TERM 2377 1943473 - 1943447 - R 100 -13.1 -5.02287 | gap 1, opp_overlap 1943446 1943444, overlap 1943449 GACAAAAAGATAAAA CT-CAGGCGGTC GAAC GACCGCCTGGAG ATGTTCACTTACGCC TERM 2378 1943470 - 1943449 - R 90 -15.9 -2.72919 | opp_overlap 1943446 1943444, overlap 1943447 CAAAAAGATAAAACT CAGGCGGTC GAAC GACCGCCTG GAGATGTTCACTTAC acpP 1943718 - 1943482 - | acyl carrier protein fabG 1944663 - 1943929 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 2379 1944624 - 1944644 + g 90 -7.5 -4.86621 | overlap 1944626 GGCCAATTCCGCGGC TTGCACCGG TTA CCAGTGCGA TTTTTCCTTCAAAAT fabD 1945605 - 1944676 - | malonyl-CoA-[acyl-carrier-protein] transacylase fabH 1946574 - 1945621 - | 3-oxoacyl-(acyl carrier protein) synthase III plsX 1947712 - 1946642 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 2380 1947656 - 1947627 - G 78 -10.7 -3.51032 | overlap 1947628 1947631 AGTTGCGAATTAGAA TTCAGTGCCTGCA ATGC TGCAGGCACTGTC ACGGAAGGGCCAAAA TERM 2381 1947655 - 1947628 - G 85 -14.2 -2.70298 | overlap 1947627 1947631 GTTGCGAATTAGAAT TCAGTGCCTGCA ATGC TGCAGGCACTGT CACGGAAGGGCCAAA TERM 2382 1947652 - 1947631 - G 90 -14.5 -2.63347 | overlap 1947628 1947627 GCGAATTAGAATTCA GTGCCTGCA ATGC TGCAGGCAC TGTCACGGAAGGGCC TERM 2383 1947777 - 1947792 + r 70 -9 -3.34895 | opp_overlap 1947761 CCTCACTAAGCTTCA TCACGC AGAC GCGTGA TTACTTAGCGATGAC rpmF 1947966 - 1947793 - | 50S ribosomal protein L32 yceD 1948539 - 1948018 - | hypothetical protein TERM 2384 1948607 - 1948579 - H 83 -10.3 -3.74077 | opp_overlap 1948585, overlap 1948585 CGTCATAGAGTCAAA GAAAAAGGCAGCC TGT GGTTGCCTTTTGC CAATAATTCGCACAC TERM 2385 1948585 - 1948601 + H 83 -10.1 -4.12902 | opp_overlap 1948579 1948585 AGAGTCAAAGAAAAA GGCAGCC TGT GGTTGCC TTTTGCCAATAATTC TERM 2386 1948601 - 1948585 - H 95 -7.9 -5.31519 | opp_overlap 1948585, overlap 1948579 AGAGTCAAAGAAAAA GGCAGCC TGT GGTTGCC TTTTGCCAATAATTC TERM 2387 1948626 - 1948637 + H 71 -3.6 -4.78077 | overlap 1948611 1948608 TAATTCGCACACATT GCGG GTTA CTGC TTTATTTTCGTTCAG yceF 1948738 - 1949322 + | Maf-like protein TERM 2388 1949337 - 1949392 + T 74 -10.3 -3.28712 | opp_overlap 1949389 1949390, overlap 1949338 1949362 1949363 GTTGTTTGCGCCGGA TGCGGTTACGTCGCATCCGGCAATC GGTGCA GGCGGCCTGATGCGGCGTAAACGCC TTATCAGGCCAACCG TERM 2389 1949338 - 1949391 + T 83 -13.8 -2.57132 | opp_overlap 1949389 1949390, overlap 1949337 1949362 1949363 TTGTTTGCGCCGGAT GCGGTTACGTCGCATCCGGCAATC GGTGCA GGCGGCCTGATGCGGCGTAAACGC CTTATCAGGCCAACC TERM 2390 1949363 - 1949410 + T 76 -11.8 -2.60219 | opp_overlap 1949389 1949390, overlap 1949338 1949337 1949362 CGCATCCGGCAATCG GTGCAGGCGGCCTGATGCGGCG TAAA CGCCTTATCAGGCCAACCGCCC ATTATCAGGCTTATA yceC 1950393 - 1949434 - | 23S rRNA pseudouridylate synthase C SBO_1978 1950927 - 1951697 + | putative transposase SBO_1979 1952327 - 1951800 - | hypothetical protein TERM 2391 1953010 - 1952996 - g 88 -5.6 -5.18357 | GAAGCCATCAAAAAA GCCGCT GAA AGCCGC CCGGCCCCGTTCCTG rne 1952408 - 1955593 + | ribonuclease E TERM 2392 1955634 - 1955615 - T 79 -10.7 -3.5013 | opp_overlap 1955615, overlap 1955611 1955607 GCTCAAAGTAATCAA GCCCTGG TAACTG CCAGGGC TTTTTTATTTCATGT TERM 2393 1955615 - 1955634 + T 100 -11.4 -5.69793 | opp_overlap 1955611 1955607 1955615 GCTCAAAGTAATCAA GCCCTGGT AACT GCCAGGGC TTTTTTATTTCATGT TERM 2394 1955748 - 1955720 - T 100 -13.8 -5.85178 | overlap 1955709 AATAGGCAAAAAAAA TGCCCGCCCCGG CGATC CCTGAGCGGGCA GACAAAACATACCCA flgL 1956743 - 1955790 - | flagellar hook-associated protein FlgL flgK 1958398 - 1956755 - | flagellar hook-associated protein FlgK flgI 1960502 - 1959405 - | flagellar basal body P-ring protein flgH 1961212 - 1960514 - | flagellar basal body L-ring protein TERM 2395 1961257 - 1961239 - R 74 -8.1 -3.96337 | TCAAAAATCAGTAAA CCGGTGA ACCTG CCACCGG TTAAGCCTTAGAGTT flgG 1962047 - 1961265 - | flagellar basal body rod protein FlgG flgF 1962940 - 1962185 - | flagellar basal body rod protein FlgF TERM 2396 1962872 - 1962884 + g 74 -10.5 -3.24329 | opp_overlap 1962870, overlap 1962870 ATTGGCCAGATTACT GGCGG TTA CCGCC TGTTGATTCAGCGTC flgE 1964168 - 1962960 - | flagellar hook protein FlgE flgD 1964888 - 1964193 - | flagellar basal body rod modification protein TERM 2397 1964441 - 1964460 + g 86 -7.1 -4.88736 | opp_overlap 1964441 GTTCACCAATATCAA TGGTGCG CACAAC CGCGCCA TTTTTATCGGTGATG flgC 1965304 - 1964900 - | flagellar basal body rod protein FlgC TERM 2398 1965278 - 1965266 - G 72 -10.5 -3.05816 | GGACTGGGCAGTTAA CGCCG ACC CGGCG ATATCAAAAATATTC flgB 1965637 - 1965308 - | cell-proximal portion of basal-body rod TERM 2399 1965578 - 1965596 + g 72 -10.2 -3.38991 | overlap 1965577 CACTTCCTGACGCTG GGCGCGCA GAT TGAGCGCC TCTTGTTGAAAACGT TERM 2400 1966175 - 1966147 - g 77 -6.6 -4.564 | gap 1 AATGTCAAACTAAAA CGCGGACGACTGG ATAC CCTGCCA-CCGCG TACGGTGCTGGATAT flgA 1965793 - 1966452 + | flagellar basal body P-ring biosynthesis protein FlgA TERM 2401 1966820 - 1966793 - g 81 -6.2 -4.86621 | overlap 1966794 1966797 ACGGTGAACTAAAAA TGGACATCGGCA AAAT TGCCGATGCGCT GATCAACGAAGCTCA TERM 2402 1966819 - 1966794 - g 74 -9.7 -3.5125 | overlap 1966793 1966797 CGGTGAACTAAAAAT GGACATCGGCA AAAT TGCCGATGCGC TGATCAACGAAGCTC TERM 2403 1966816 - 1966797 - g 78 -12.2 -2.88788 | overlap 1966794 1966793 TGAACTAAAAATGGA CATCGGCA AAAT TGCCGATG CGCTGATCAACGAAG flgM 1966528 - 1966857 + | anti-sigma28 factor FlgM flgN 1966862 - 1967278 + | protein of flagellar biosynthesis TERM 2404 1967282 - 1967313 + T 72 -10.2 -2.77344 | gap 1, opp_overlap 1967282 1967285, overlap 1967282 1967286 ATTTCGATCTGAAGA TTATCTCCGGCCTGC ACT GCAGGCCGGA-ATGC ATTGTTACACCGTCC TERM 2405 1967311 - 1967285 - T 86 -14.4 -2.75074 | opp_overlap 1967282 1967282 1967286, overlap 1967282 TCGATCTGAAGATTA TCTCCGGCCTGC ACT GCAGGCCGGAAT GCATTGTTACACCGT TERM 2406 1967286 - 1967310 + T 90 -15.7 -2.6563 | opp_overlap 1967285 1967282, overlap 1967282 1967282 CGATCTGAAGATTAT CTCCGGCCTGC ACT GCAGGCCGGAA TGCATTGTTACACCG mviN 1968853 - 1967318 - | putative virulence factor TERM 2407 1968900 - 1968884 - R 83 -10.1 -4.15106 | overlap 1968875 GACCAACGGGCAAAA CGCCTGC AAG ACAGGCG CTGAAAGAGGCGAAT mviM 1969886 - 1969020 - | putative virulence factor yceH 1970535 - 1969888 - | hypothetical protein rimJ 1971130 - 1970546 - | ribosomal-protein-S5-alanine N-acetyltransferase TERM 2408 1970865 - 1970853 - G 84 -7.7 -4.67556 | opp_overlap 1970853 ACAACATTGGAAAAA TTGGC AAC GCCAA TAATCTCTTTTTCGT TERM 2409 1971283 - 1971253 - H 71 -3.4 -4.8667 | overlap 1971242 1971254 CATATTTGATAAAAA CTCTCTATCAAAGC GAC GTTTTGATAAAAAA ATATTGTCCCCGAAG TERM 2410 1971750 - 1971769 + G 87 -4.9 -5.30686 | opp_overlap 1971759 GTGGTGAAACTAATC CGTCCAC AACAAC GTGGTCG TTTTTTCTCGCTGTT TERM 2411 1971863 - 1971879 + G 79 -3.5 -5.03227 | overlap 1971865 CGACTTTCGCCTGGT CTGCGCC ACA GGGGCCG TTTTGTTTGTGCTGT TERM 2412 1972543 - 1972533 - g 74 -8.2 -3.92373 | opp_overlap 1972533 1972533, overlap 1972534 CAGTTTAGTCAGAAA CGCG CCG CGCG TCGTTTGCTGGAACG yceL 1971366 - 1972568 + | multidrug resistance protein MdtH grxB 1972632 - 1973279 + | glutaredoxin 2 TERM 2413 1973282 - 1973328 + F 83 -4.3 -5.31275 | gap 1, overlap 1973290 1973292 AATGGCGATTTAATC CTGACCCGCCGCGGCAGCCTGT ATTC GCGGGTTGCCGCCGTTT-TCAG TTTTTTCTGCTGGCG TERM 2414 1973290 - 1973321 + F 100 -12.2 -4.55016 | overlap 1973282 1973292 TTTAATCCTGACCCG CCGCGGCAGCCTGT ATTC GCGGGTTGCCGCCG TTTTCAGTTTTTTCT TERM 2415 1973292 - 1973319 + F 80 -13.4 -2.56715 | overlap 1973290 1973282 TAATCCTGACCCGCC GCGGCAGCCTGT ATTC GCGGGTTGCCGC CGTTTTCAGTTTTTT yceB 1973413 - 1973973 + | hypothetical protein TERM 2416 1973980 - 1973995 + F 100 -11.8 -4.91852 | opp_overlap 1973977 ACGGATTAATGACGA GGGCGC ATTC GCGCCC TTTATTTTTCGTGCA pyrC 1974079 - 1975125 + | dihydroorotase dinI 1975199 - 1975444 + | DNA damage-inducible protein I TERM 2417 1975466 - 1975481 + F 100 -7.5 -5.85244 | GTGATTTTTGTTTTT GCCGG ATCGCC CCGGC TTTTTTATTTTACTT TERM 2418 1976013 - 1976029 + F 76 -9.4 -3.74347 | opp_overlap 1976013, overlap 1976024 ACCATCCACCCAAAA GGCACC TCACC GGTGCC TTTACCATTTCTGGG TERM 2419 1976029 - 1976013 - f 83 -9.4 -4.20084 | opp_overlap 1976013 1976024 ACCATCCACCCAAAA GGCACC TCACC GGTGCC TTTACCATTTCTGGG TERM 2420 1976118 - 1976104 - g 100 -3.6 -5.76633 | GCAGAGAGAAAAAAA TGAAAT ACG ATCTCA TCATTATTGGCAGCG solA 1976103 - 1977221 + | N-methyltryptophan oxidase TERM 2421 1977231 - 1977250 + F 93 -10.7 -4.57837 | opp_overlap 1977225 CAATAATCATCATTA CGGCCTC CAGAAT GAGGCCG TTTTTACAGGAGTAT TERM 2422 1977310 - 1977320 + G 75 -5.4 -4.62163 | CAATAATATTCGCGA GCAT CTG ATGC TTTATCTTTTTCTCT yceO 1977242 - 1977382 + | hypothetical protein TERM 2423 1978041 - 1978076 + G 77 -6 -4.66609 | gap 1, overlap 1978042 CGCGACCCTTGCCGA CGCTGGCGCACAGGCAG ACT TTGCCGGTGC-CCTGCA TTTTTGGCTCGCGTG SBO_2007 1977643 - 1978209 + | putative cytochrome yceI 1978213 - 1978788 + | hypothetical protein TERM 2424 1978794 - 1978828 + T 72 -5.7 -4.46675 | opp_overlap 1978797 1978798, overlap 1978796 1978799 GCAGAAGTAAGCGTG AAATGTTGCCGGATG GCACG CATCCGGCAATGATA TTTATTCTGTTGGAT TERM 2425 1978796 - 1978826 + T 72 -8.3 -3.83144 | opp_overlap 1978797 1978798, overlap 1978794 1978799 AGAAGTAAGCGTGAA ATGTTGCCGGATG GCACG CATCCGGCAATGA TATTTATTCTGTTGG TERM 2426 1978824 - 1978798 - T 74 -10.9 -2.77005 | opp_overlap 1978796 1978794 1978799, overlap 1978797 AAGTAAGCGTGAAAT GTTGCCGGATG GCACG CATCCGGCAAT GATATTTATTCTGTT TERM 2427 1978799 - 1978823 + T 88 -14.4 -2.9735 | opp_overlap 1978798 1978797, overlap 1978796 1978794 AGTAAGCGTGAAATG TTGCCGGATG GCACG CATCCGGCAA TGATATTTATTCTGT yceA 1979420 - 1978830 - | hypothetical protein TERM 2428 1979179 - 1979155 - G 70 -4.1 -4.63218 | opp_overlap 1979176 1979178 TTTTTGCCAATAAAA CGCACCGGCAA GCC CTGCTCGCGCG CCTTACGGGCGTATT TERM 2429 1979900 - 1979880 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 2430 1980252 - 1980241 - g 77 -5.8 -4.63218 | opp_overlap 1980246 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_2010 1979821 - 1980660 + | IS911 ORF2 TERM 2431 1981538 - 1981516 - g 72 -8.4 -3.73224 | TTACGTTTTATGAAA CGACGCGCAA AAA TTGTGCATCG CAACCTGGAACTGTG TERM 2432 1981889 - 1981879 - g 70 -5.4 -4.41348 | TTGCGCTCAAATAAA TCGA TGC TCGA CCGCAAAGATTTAAA htrB 1981357 - 1982277 + | lipid A biosynthesis lauroyl acyltransferase SBO_2013 1983628 - 1983726 + | hypothetical protein msyB 1983753 - 1984130 + | hypothetical protein yceK 1984358 - 1984131 - | hypothetical protein TERM 2433 1984408 - 1984382 - R 85 -5.8 -5.40072 | opp_overlap 1984384 1984400 1984402, overlap 1984384 1984393 TCTTCCGTAAAAAAA TACCGGCATAAC GCC GTAATGCCAGTC AGTTAAGCAACTGAC TERM 2434 1984406 - 1984384 - R 79 -8.4 -4.34482 | opp_overlap 1984384 1984400 1984402, overlap 1984382 1984393 TTCCGTAAAAAAATA CCGGCATAAC GCC GTAATGCCAG TCAGTTAAGCAACTG TERM 2435 1984400 - 1984429 + r 89 -9.3 -4.59109 | opp_overlap 1984384 1984382 1984393, overlap 1984384 1984402 CGGCATAACGCCGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2436 1984402 - 1984427 + r 100 -16.3 -3.90762 | opp_overlap 1984384 1984382 1984393, overlap 1984384 1984400 GCATAACGCCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_2016 1985757 - 1984411 - | IS4 orf TERM 2437 1985747 - 1985772 + g 73 -9.1 -3.61398 | opp_overlap 1985747 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 2438 1985772 - 1985747 - G 100 -9.8 -5.61596 | opp_overlap 1985747 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 2439 1985822 - 1985839 + r 73 -2 -5.11063 | gap 1, opp_overlap 1985815, overlap 1985815 1985824 1985833 TTAACTGATCGGCAT TA-CGGC ATAAC GCCGGTA TTTTTATTGGCTCGT mdoG 1990040 - 1988505 - | glucan biosynthesis protein G TERM 2440 1989596 - 1989606 + g 88 -5.4 -5.22289 | CCCCGAGCATGCTGA CGAT TTC ATCG TTTTTATCTTTGCTG TERM 2441 1990954 - 1990977 + G 100 -3.2 -5.64274 | gap 1, overlap 1990956 1990957 AAACGAATAAAAAAT TC-TCGATGGT AAA ACTATCGGTGA TTTTTTTATGCCTCG mdoC 1990434 - 1991591 + | glucans biosynthesis protein ymdC 1993080 - 1991599 - | putative synthase TERM 2442 1991643 - 1991673 + gT 100 -11.8 -5.03715 | opp_overlap 1991646, overlap 1991646 ACGCCAGTCTGACCA TAACCCGCTTCCAG AAA CTGGTGGCGGGTTC TTTTTTGAGAATAAT TERM 2443 1991646 - 1991670 + gT 100 -13.5 -4.62085 | opp_overlap 1991646, overlap 1991643 CCAGTCTGACCATAA CCCGCTTCCAG AAA CTGGTGGCGGG TTCTTTTTTGAGAAT TERM 2444 1991670 - 1991646 - GT 80 -11.3 -3.41051 | opp_overlap 1991643 1991646 CCAGTCTGACCATAA CCCGCTTCCAG AAA CTGGTGGCGGG TTCTTTTTTGAGAAT TERM 2445 1991680 - 1991691 + gT 70 -4.4 -4.46112 | GGCGGGTTCTTTTTT GAGA ATAA TCTC TTTCTTTGCATGACG SBO_2021 1993555 - 1993022 - | hypothetical protein SBO_2022 1993962 - 1993651 - | hypothetical protein SBO_2023 1995215 - 1994328 - | IS629 ORF2 TERM 2446 1994895 - 1994907 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_2024 1995490 - 1995215 - | IS629 ORF1 SBO_2025 1995623 - 1995982 + | IS600 ORF2 TERM 2447 1996102 - 1996117 + T 87 -10.4 -4.08706 | opp_overlap 1996102 TCTCCCGAAAAAAAA CAGGGC TTGC GCCCTG TTTCTGTAATACAAA TERM 2448 1996117 - 1996102 - T 100 -10.4 -5.75342 | opp_overlap 1996102 TCTCCCGAAAAAAAA CAGGGC TTGC GCCCTG TTTCTGTAATACAAA csgA 1996595 - 1996140 - | cryptic curlin major subunit TERM 2449 1996885 - 1996858 - H 82 -11.4 -3.50447 | opp_overlap 1996858, overlap 1996834 TGAATCTCCAGACAA CCAGTGTCACTT AAAT AAGTGATACTGG TTGTCTGGAGATTCA TERM 2450 1996858 - 1996885 + H 93 -13.6 -3.50447 | opp_overlap 1996834 1996858 TGAATCTCCAGACAA CCAGTGTCACTT AAAT AAGTGATACTGG TTGTCTGGAGATTCA TERM 2451 1997057 - 1997070 + H 77 -3.9 -5.11836 | ACGCTGTTATCTACG CAAAA AATA TTTTG TTTTCTTTTAAATCT TERM 2452 1997863 - 1997842 - g 93 -8.9 -4.77036 | opp_overlap 1997845 TTTGAGCAGGAAAAA CAACAATAT CAAA ATATTGTTG CTAAATACGCCTGAA csgD 1997606 - 1998256 + | DNA-binding transcriptional regulator CsgD SBO_2029 1998556 - 1998320 - | putative IS1 encoded protein insB 1998631 - 1999134 + | IS1 ORF2 TERM 2453 1999364 - 1999351 - T 73 -4.5 -4.77165 | opp_overlap 1999351, overlap 1999352 TGCGGCACAAGAAAA CGGCA CGGT TGCCA TTAATAACCGAATCC TERM 2454 1999864 - 1999846 - T 95 -7.4 -5.4251 | opp_overlap 1999845 1999846 CTGACAGATAAAAAA GCCGGA ATTATCA TCCGGC ATTTTACTGTTTAAG TERM 2455 1999881 - 1999907 + T 100 -9.5 -5.01811 | opp_overlap 1999885, overlap 1999885 TTTTACTGTTTAAGC GAAAGCGTGAG TGCCC CTCACGCTTTA TTTTTGATTTCCTGC TERM 2456 1999903 - 1999885 - T 83 -10.3 -3.75332 | opp_overlap 1999881 1999885 ACTGTTTAAGCGAAA GCGTGAG TGCCC CTCACGC TTTATTTTTGATTTC TERM 2457 1999885 - 1999903 + T 100 -10.3 -5.00388 | opp_overlap 1999885, overlap 1999881 ACTGTTTAAGCGAAA GCGTGAG TGCCC CTCACGC TTTATTTTTGATTTC ycdZ 2000437 - 1999898 - | hypothetical protein TERM 2458 1999952 - 1999970 + g 71 -2.2 -4.88407 | overlap 1999950 CTTTGCACTACGCGC CGCCAGCC ACA GGCCGCTG TTTTTCATTGCGTAA ycdY 2001045 - 2000491 - | putative oxidoreductase component ycdX 2001806 - 2001069 - | putative hydrolase TERM 2459 2001514 - 2001497 - G 72 -5.5 -4.57073 | CATGTGGTGCAAAAA CCGGCTC ATGA AAACCGG CAATAATCAGATCCA ycdW 2002838 - 2001861 - | putative dehydrogenase TERM 2460 2003134 - 2003153 + r 100 -10 -5.92337 | opp_overlap 2003134 2003132 CATATTTAAAGAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTTCGTATAT TERM 2461 2003315 - 2003334 + r 100 -10 -5.62219 | opp_overlap 2003313 2003315 CATCTTTAAAGAAGA GCTCGTAC GAAG GTACGGGC TTTTTTTCGTATATT SBO_2037 2004078 - 2003392 - | hypothetical protein TERM 2462 2003799 - 2003814 + g 79 -4.7 -4.88918 | opp_overlap 2003799 2003801 ACATTTTTTCACAAC GAGTG ATTAAC CACTC TTTTCTTTCCAATAA TERM 2463 2004644 - 2004620 - R 100 -13.6 -4.86731 | overlap 2004624 TCTGTTGAAATAAAA CAAAGCCCGG TTCGC CCGGGCTCTG CACCGATAACACACT TERM 2464 2004640 - 2004624 - R 100 -10.8 -4.96996 | overlap 2004620 TTGAAATAAAACAAA GCCCGG TTCGC CCGGGC TCTGCACCGATAACA phoH 2005723 - 2004659 - | hypothetical protein TERM 2465 2005498 - 2005481 - G 70 -10.5 -2.80816 | opp_overlap 2005480 2005481 TTTGTATTCATCACA CGCGCCG TTGG CAGCGCG ATTATGCGCACGAAC ycdB 2007340 - 2006069 - | hypothetical protein TERM 2466 2007218 - 2007228 + g 95 -6.8 -5.28176 | TGAAAGCGTACCCGG CGCA CTT TGCG TTTTTTGTGCATGAG TERM 2467 2007297 - 2007320 + g 90 -9.6 -4.53036 | opp_overlap 2007294 2007295, overlap 2007294 ACTTTCAGTAAACGT CGGCGTGA CGGTTCAT TCACGCCG TTTTCATCTTTATAC ycdO 2008473 - 2007346 - | hypothetical protein TERM 2468 2008881 - 2008867 - R 71 -7 -4.03078 | CCAGTAGAGCAGAAA GCCGAG CAC CACGGC TGTAGCAAGACCGAG TERM 2469 2010018 - 2010032 + r 72 -8.6 -3.72893 | opp_overlap 2010010 ACAAAACCGCCGCAG GCTAAG TCC CTTAGC TTTCCTGCAACCGTG putP 2011536 - 2010028 - | major sodium/proline symporter TERM 2470 2011696 - 2011713 + H 71 -3.5 -4.74801 | gap 1 ATTTACATTAAATTT TAGTGCTC AGC GA-CACTA TTTTTCATCAGGTTG TERM 2471 2012265 - 2012281 + G 70 -10.9 -2.82516 | overlap 2012259 GCCTATCGTCGCCCG GAAACCG AAG CGGTTTC TATGCTGCTGGAACA TERM 2472 2012685 - 2012674 - g 70 -7.2 -4.12188 | GCATTATCGGTAAAA GCGG TGAA CCGC TGATCCGCAAAGGTG TERM 2473 2013905 - 2013891 - g 75 -5.7 -4.62336 | AGTGCACTGCAAAAA TGGCA GGCCT TGCCA ATGCTGGAACAACCG TERM 2474 2015887 - 2015902 + G 79 -10.4 -3.73775 | opp_overlap 2015878 TGAATACCGCTGCCG CTGGCG GTAA CGCCAG TTTAATGACGATCGG putA 2011959 - 2015921 + | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2475 2015928 - 2015957 + T 70 -9.2 -3.39018 | opp_overlap 2015925 2015926 2015923, overlap 2015925 2015929 ATCGGTTAAACAGGT AGCCGGAGGATG TTACAC CCTCCTCCGGCA TCTTTAACGTGGTCG TERM 2476 2015929 - 2015956 + T 78 -12.7 -2.63089 | opp_overlap 2015925 2015926 2015923, overlap 2015928 2015925 TCGGTTAAACAGGTA GCCGGAGGATG TTACAC CCTCCTCCGGC ATCTTTAACGTGGTC ycdC 2016599 - 2015961 - | putative tet operon regulator TERM 2477 2016131 - 2016176 + g 74 -8.3 -3.99405 | gap 1, opp_overlap 2016131 AATGCTGCGGATCAA TCGGCGCGAGTTTGCCGCTT TTGACCC AACCGGCAATCA-GCGCCGA TTTCTCATCAATTAA TERM 2478 2016523 - 2016536 + g 82 -2.3 -5.45652 | overlap 2016523 AAAGTGTCCAGTGCT GCGCT AAGA ATCGC TTTTTTCTTCGCGCT SBO_2045 2016830 - 2017117 + | hypothetical protein TERM 2479 2018635 - 2018625 - g 70 -4.6 -4.54821 | AGTCGAAGCAGAAAA CGGC CAG ACCG GATTCGCTGTTTCGA TERM 2480 2018651 - 2018669 + G 72 -5.2 -4.46212 | GATTCGCTGTTTCGA CAGCCGGT GAA ATGGGCTG TTTTATCGTCGAAAA SBO_2047 2018392 - 2019609 + | putative racemase TERM 2481 2019824 - 2019840 + G 77 -3 -5.03227 | gap 1 GAGTAATGAAGCTTA TGCGCTG GGAG CAG-GCA TTTTCTTTGTGGTAT SBO_2048 2019627 - 2020955 + | putative transport protein SBO_2049 2020973 - 2021776 + | putative aldolase yfaD 2022719 - 2021817 - | hypothetical protein TERM 2482 2022578 - 2022617 + g 71 -9.4 -3.4376 | gap 1 TAAAACTAGTGGGTT CCA-GGCGTAAGGTTTGCA GGT TGCAAAGCTTGCGCAGTGG TTCTGGTAAATGTAT TERM 2483 2022899 - 2022872 - R 100 -14.2 -4.65895 | TCGTGTACGCAAAAA TGCCCGGTAACC ACAT GCTTACCGGGCA TCAGAAAGGAGTTTA glpC 2024102 - 2022912 - | sn-glycerol-3-phosphate dehydrogenase subunit C glpB 2025358 - 2024099 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 2484 2024336 - 2024346 + g 74 -8.2 -3.86897 | CTTATACCATTCACC CCGC GTG GCGG TTTGTAGCACATCAA TERM 2485 2025274 - 2025289 + g 72 -4.6 -4.66833 | CACGCGTGACAATGG CACAGC GCAG GCCGTG TTTTTGCAGTTGCAG glpA 2026976 - 2025348 - | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 2486 2027513 - 2027528 + G 70 -6 -4.25104 | opp_overlap 2027512 GGTTCGGTATCAGAT CGCTCG AATC CGCGCG TTTTCCTCCCCGCAG TERM 2487 2028209 - 2028224 + G 71 -2.4 -4.99043 | GTCTTCCGTGGCAAC CGTGGG GCAA CCGGCG TTTTCTTTATGACAC TERM 2488 2028402 - 2028386 - g 79 -3.5 -5.08824 | CTGGCACCGAAAAAA GCGGCAG GTA CGGCAGC GGGCTTTACCGGGCT glpT 2027249 - 2028607 + | sn-glycerol-3-phosphate transporter glpQ 2028612 - 2029688 + | glycerophosphodiester phosphodiesterase TERM 2489 2029697 - 2029722 + T 93 -15.5 -2.86743 | overlap 2029699 AGAGTAATGTTACTG CAGGATGGCGT TCAT GCGCCATCCTG TCTCATATCAAATTT TERM 2490 2029699 - 2029720 + T 80 -12.3 -2.97925 | overlap 2029697 AGTAATGTTACTGCA GGATGGCGT TCAT GCGCCATCC TGTCTCATATCAAAT yfaH 2029936 - 2029730 - | hypothetical protein TERM 2491 2030852 - 2030802 - R 70 -9.9 -3.07113 | gap 1 TACTACGCCATGTAA TCGTTGTAG-GCCAGATAAGACAC ATAA GCGTTGTATCTGGCACTACAACCA ATTCACATCTCGATT yfaE 2031109 - 2030855 - | 2Fe-2S ferredoxin YfaE nrdB 2032239 - 2031109 - | ribonucleotide-diphosphate reductase subunit beta TERM 2492 2032352 - 2032335 - R 71 -7.7 -3.88291 | gap 1 TATCAGGCCTACAAA TCCGAGCC GTA GGC-CGGA TAAGGCGTTCACGCT nrdA 2034671 - 2032386 - | ribonucleotide-diphosphate reductase subunit alpha TERM 2493 2032837 - 2032849 + g 70 -4.8 -4.4959 | opp_overlap 2032826 GAAAGCGTGGAGTTA CGCA GGCCG TGCG TTTTGATTGATTCAC SBO_2061 2035547 - 2035374 - | putative IS1 encoded protein insB 2035640 - 2036143 + | IS1 ORF2 TERM 2494 2039045 - 2039058 + T 71 -3.7 -4.87665 | overlap 2039042 2039041 GGAGTGATGATTTTG CCCAG ACGG CAGGG TTTTTGTCGATGACG TERM 2495 2039169 - 2039125 - T 88 -12.3 -3.53811 | opp_overlap 2039117 2039156, overlap 2039166 CGGATGCGGCGTAAA CGCCTTATCCGGCCTAC GGGGAGCATTT GTAGGCCTGATAAGACG CGGCAAGCGTCGCAT ubiG 2039935 - 2039213 - | 3-demethylubiquinone-9 3-methyltransferase TERM 2496 2040954 - 2040934 - g 82 -2.4 -5.45802 | overlap 2040947 CTGGTAAAAGAAAAA CGCGTGGA AGGCA TCAGCGCG CTGCGTGACGAGTCT TERM 2497 2042350 - 2042331 - g 72 -4.3 -4.67608 | gap 1, overlap 2042348 CACCGCAACACAAAA CGGTTACG GTAAA CGTA-CCG CAGTGGCGGAATACC gyrA 2040082 - 2042709 + | DNA gyrase subunit A TERM 2498 2042744 - 2042731 - f 76 -8.1 -4.13767 | opp_overlap 2042731 TTCTTCATGCCAAAA GGGAG CTAT CTCCC TTGTTTGAATTGAAA TERM 2499 2042731 - 2042744 + F 74 -8.1 -4.0098 | opp_overlap 2042731 TTCTTCATGCCAAAA GGGAG CTAT CTCCC TTGTTTGAATTGAAA TERM 2500 2042761 - 2042782 + F 81 -8.7 -4.55023 | opp_overlap 2042761, overlap 2042756 TGTTTGAATTGAAAA GTCCAGGCT GCAA AGTCTGGGC TTTTGTCGTATTAGG SBO_2066 2042810 - 2043253 + | hypothetical protein SBO_2067 2043305 - 2043607 + | IS600 ORF1 SBO_2068 2044471 - 2043632 - | IS911 ORF2 TERM 2501 2044040 - 2044051 + g 77 -5.8 -4.63218 | opp_overlap 2044036 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 2502 2044393 - 2044411 + g 74 -2.3 -5.08169 | ATACAGCCCGTCTGC CGTCTGG TTTTT CAGGACG TTTTTTCCAGTATCT SBO_2069 2045544 - 2044657 - | IS629 ORF2 TERM 2503 2045191 - 2045211 + g 72 -6.7 -4.15833 | GAACTGACGGTTTAC GCGGTCGCC TGC GGCAACGGC TTTTCCGCTGATGGT TERM 2504 2045224 - 2045236 + g 70 -4.8 -4.56597 | GGCTTTTCCGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_2070 2045819 - 2045544 - | IS629 ORF1 SBO_2071 2046150 - 2045896 - | IS911 ORF1 insB 2046956 - 2046453 - | IS1 ORF2 SBO_2073 2047031 - 2047246 + | putative IS1 encoded protein SBO_2074 2047755 - 2048105 + | putative protein encoded within IS TERM 2505 2048140 - 2048109 - f 72 -5.2 -4.60255 | gap 1, overlap 2048110 2048111 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 2506 2048139 - 2048111 - f 71 -10.3 -2.60776 | overlap 2048109 2048110 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_2075 2048325 - 2048663 + | putative protein encoded within IS SBO_2076 2048733 - 2049728 + | putative protein encoded within IS TERM 2507 2049757 - 2049726 - f 76 -7.5 -4.258 | gap 2 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CGAAGAATTTCGCCA SBO_2077 2049811 - 2050182 + | putative tail fiber assembly protein TERM 2508 2050220 - 2050197 - T 72 -6.7 -4.25848 | gap 1, overlap 2050211 AAGGTGTGATTAAAA CGCCCA-CGG GAGAA CCGCTGGACG GCGCAACCATTACAC TERM 2509 2050290 - 2050329 + T 72 -10.7 -2.90941 | opp_overlap 2050295 2050297 2050300, overlap 2050300 TTTTCAGCCATGTCA CCACACAGAACGGGGAA TATGAC TTCCCCGTTCTGCCGGG TGTGTGAGGTGTACT TERM 2510 2050324 - 2050295 - T 100 -16.6 -2.79915 | opp_overlap 2050290 2050300, overlap 2050297 2050300 AGCCATGTCACCACA CAGAACGGGGAA TATGAC TTCCCCGTTCTG CCGGGTGTGTGAGGT TERM 2511 2050322 - 2050297 - T 82 -13.4 -2.94747 | opp_overlap 2050290 2050300, overlap 2050295 2050300 CCATGTCACCACACA GAACGGGGAA TATGAC TTCCCCGTTC TGCCGGGTGTGTGAG TERM 2512 2050300 - 2050319 + T 70 -9.3 -3.3095 | opp_overlap 2050297 2050295 2050300, overlap 2050290 TGTCACCACACAGAA CGGGGAA TATGAC TTCCCCG TTCTGCCGGGTGTGT TERM 2513 2050319 - 2050300 - T 72 -9.3 -3.61902 | opp_overlap 2050300 2050290, overlap 2050297 2050295 TGTCACCACACAGAA CGGGGAA TATGAC TTCCCCG TTCTGCCGGGTGTGT SBO_2078 2051210 - 2050359 - | IS600 ORF2 SBO_2079 2052100 - 2051195 - | insertion element IS2 transposase InsD SBO_2080 2052423 - 2052058 - | insertion sequence 2 OrfA protein SBO_2081 2052869 - 2052567 - | IS600 ORF1 SBO_2082 2052934 - 2054178 + | putative phage tail fiber protein SBO_2083 2054129 - 2054752 + | putative tail component of prophage TERM 2514 2054867 - 2054890 + T 93 -10.2 -4.58395 | opp_overlap 2054864 2054863, overlap 2054869 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 2515 2054869 - 2054888 + T 100 -15 -3.90762 | opp_overlap 2054864 2054863, overlap 2054867 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_6 2056695 - 2054932 - | invasion plasmid antigen TERM 2516 2057026 - 2056992 - H 100 -10.1 -5.24129 | opp_overlap 2056992 TGCGTTGACAAAAAA TTAGCGCAAGAAGAC AAAAA ATCACCTTGCGCTAA TGCTCTGTATCAGGT TERM 2517 2058165 - 2058178 + H 70 -2.3 -4.96848 | overlap 2058166 CATTCTGGGTAAGGA TGCTG AAGG CGGCG TTTTTGTCTCCGAGA TERM 2518 2060693 - 2060672 - H 74 -10.9 -2.79679 | AATACTGGCAGCATA TGCTCGACA GTTA TGCCGAGCA GGCGGATAACATGCC TERM 2519 2062917 - 2062927 + G 70 -6.8 -4.05446 | opp_overlap 2062913, overlap 2062910 2062909 CCCCGACAGCAGCGC CACG CAG CGTG TTTCTGCTTCGCCAG TERM 2520 2063213 - 2063198 - g 95 -6 -5.40072 | opp_overlap 2063198, overlap 2063199 GGCTGGCGAAAAAAA TGCCGC AGTG GCGGCG TATATTACAAGGCGA TERM 2521 2063212 - 2063199 - g 76 -9.5 -3.83561 | opp_overlap 2063198, overlap 2063198 GCTGGCGAAAAAAAT GCCGC AGTG GCGGC GTATATTACAAGGCG SBO_2086 2061802 - 2063451 + | hypothetical protein TERM 2522 2063554 - 2063583 + GT 70 -3.6 -4.60041 | gap 2, overlap 2063536 CGCACCGCTCTCTGG CTGGCATC--CGGC AGAG GGCGAAGATGCCAG TTTTTCACAATCGAT TERM 2523 2063998 - 2063986 - gT 82 -7.7 -4.57073 | CACCGTGCTGAAAAA CAGTG GTG CACTG GATATGGATGTCACG SBO_2088 2064925 - 2064086 - | IS911 ORF2 SBO_2087 2063456 - 2064178 + | hypothetical protein TERM 2524 2064494 - 2064505 + gF 77 -5.8 -4.63218 | opp_overlap 2064490 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 2525 2064846 - 2064866 + gF 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 2526 2065501 - 2065556 + FH 78 -6 -4.78157 | overlap 2065505 TTCAGATAAGACTGC TGGGCGATCTGCCGACGCCAGGATAT AACC ATTAACAAGCGTCGGCAGATTGGTCA TTTCTTATTTTTCGT TERM 2527 2066010 - 2066029 + G 82 -11.4 -3.55815 | opp_overlap 2066010, overlap 2066025 2066027 CGCGTGGACGAGAAA CGCAGGCG GATG TGCCTGCG TTTGAACCGCTGTTT TERM 2528 2066029 - 2066010 - g 86 -10.7 -3.96148 | opp_overlap 2066010 2066025 2066027 CGCGTGGACGAGAAA CGCAGGC GGATGT GCCTGCG TTTGAACCGCTGTTT TERM 2529 2066109 - 2066130 + G 75 -4.5 -4.8543 | gap 1, overlap 2066112 AGTCATTGGCGTGGT TTAT-GCGCT ACT GGCGCGATAA TTTTTCTGCGGCTTA rcsC 2065727 - 2068576 + | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 2530 2068586 - 2068640 + T 77 -10.8 -3.32698 | opp_overlap 2068586 2068587 2068619 2068620, overlap 2068584 2068587 2068616 2068619 TCGTAGGACGGATAA GGTGTTTATGTCGCATCTGGCATT CAGTGCA AATGCCAGATGCGACGCTGACGCG TCTTATCTGGCCTAC TERM 2531 2068639 - 2068587 - T 73 -11.3 -2.62463 | opp_overlap 2068587 2068586 2068584 2068616 2068619, overlap 2068586 2068619 2068620 CGTAGGACGGATAAG GTGTTTATGTCGCATCTGGCATTCA GTG CAAATGCCAGATGCGACGCTGACGC GTCTTATCTGGCCTA TERM 2532 2068587 - 2068639 + T 86 -14.3 -2.59298 | opp_overlap 2068586 2068587 2068619 2068620, overlap 2068586 2068584 2068616 2068619 CGTAGGACGGATAAG GTGTTTATGTCGCATCTGGCATT CAGTGCA AATGCCAGATGCGACGCTGACGC GTCTTATCTGGCCTA TERM 2533 2068652 - 2068619 - T 75 -9.5 -3.61178 | opp_overlap 2068587 2068586 2068584 2068619 2068616, overlap 2068587 2068586 2068620 GGCATTCAGTGCAAA TGCCAGATGCGACGC TGAC GCGTCTTATCTGGCC TACTTTGATGTAATC TERM 2534 2068619 - 2068652 + T 78 -11.7 -3.00585 | opp_overlap 2068587 2068586 2068619 2068620, overlap 2068587 2068586 2068584 2068616 GGCATTCAGTGCAAA TGCCAGATGCGACGC TGAC GCGTCTTATCTGGCC TACTTTGATGTAATC TERM 2535 2068651 - 2068620 - T 82 -13 -2.76492 | opp_overlap 2068587 2068586 2068584 2068619 2068616, overlap 2068587 2068586 2068619 GCATTCAGTGCAAAT GCCAGATGCGACGC TGAC GCGTCTTATCTGGC CTACTTTGATGTAAT TERM 2536 2068766 - 2068733 - T 95 -14.7 -3.55622 | opp_overlap 2068743, overlap 2068701 2068734 GGCAATCGGTGCAAA TGCCAGATAAGACAC TAAC GCGTCTTATCTGGCC TACAGGTGATTAGTC TERM 2537 2068765 - 2068734 - T 100 -18.2 -2.73159 | opp_overlap 2068743, overlap 2068701 2068733 GCAATCGGTGCAAAT GCCAGATAAGACAC TAAC GCGTCTTATCTGGC CTACAGGTGATTAGT rcsB 2069426 - 2068776 - | transcriptional regulator RcsB yojN 2072115 - 2069443 - | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 2538 2070748 - 2070774 + g 70 -5 -4.56978 | opp_overlap 2070756 CCCCTGCTGGTTTTT CTCATACAGACG CTG CGCCTGCTTGAG TTTCTTGTTTACCAG TERM 2539 2072452 - 2072434 - H 100 -11 -5.48303 | AGAAGGGTAAAAAAA CCGAATGC GAG GCATCCGG TTGAAATAGGGGTAA ompC 2072853 - 2073974 + | outer membrane porin protein C TERM 2540 2073989 - 2074016 + F 80 -12.8 -3.10622 | opp_overlap 2073996, overlap 2073996 ATCTCGATGGATATC GAACAAAGGGCC TGCG GGCCCTTTTTTC ATTGTTTTCAGCGTA TERM 2541 2073996 - 2074009 + F 100 -9.5 -5.43514 | opp_overlap 2073996, overlap 2073989 TGGATATCGAACAAA GGGCC TGCG GGCCC TTTTTTCATTGTTTT TERM 2542 2074009 - 2073996 - f 87 -9.5 -4.23213 | opp_overlap 2073989 2073996 TGGATATCGAACAAA GGGCC TGCG GGCCC TTTTTTCATTGTTTT yojL 2074086 - 2075141 + | thiamine biosynthesis lipoprotein ApbE ada 2075215 - 2076279 + | O6-methylguanine-DNA methyltransferase; transcription activator/repressor alkB 2076279 - 2076929 + | AlkB TERM 2543 2078383 - 2078373 - g 79 -2.4 -5.28826 | opp_overlap 2078372 2078373, overlap 2078362 AAAGGGCAGAAAAAA CGCG TGG CGCT GTTGCTGGCGCTGGC yojI 2077005 - 2078648 + | multidrug transporter membrane component/ATP-binding component TERM 2544 2079235 - 2079265 + G 78 -9.6 -3.92641 | overlap 2079236 2079239 CTGGGCGCACCAGGT CGAGCGCGGCGTGC TGC GTACTCCGCGTTCA TTTATCAATACCGTT TERM 2545 2079236 - 2079264 + G 82 -13.1 -2.95102 | overlap 2079235 2079239 TGGGCGCACCAGGTC GAGCGCGGCGTGC TGC GTACTCCGCGTTC ATTTATCAATACCGT TERM 2546 2079239 - 2079261 + G 81 -11.2 -3.61988 | overlap 2079236 2079235 GCGCACCAGGTCGAG CGCGGCGTGC TGC GTACTCCGCG TTCATTTATCAATAC TERM 2547 2079459 - 2079449 - g 72 -6.8 -4.19624 | GATCCGCAACAGAAA GTGG CAG CCAC GCGTACGGAAATTGG yojH 2078867 - 2080513 + | malate:quinone oxidoreductase TERM 2548 2080553 - 2080517 - T 100 -18.1 -2.71011 | opp_overlap 2080519 ATTGCGTTGTAATGA TGTGCCACATCCGGCAT GGT ATGCCGGATGTGGCGTA TACTGATAAGACGCG TERM 2549 2080519 - 2080551 + T 100 -22.9 -2.82516 | opp_overlap 2080517 TGCGTTGTAATGATG TGCCACATCCGGCAT GGT ATGCCGGATGTGGCG TATACTGATAAGACG eco 2081151 - 2080663 - | ecotin precursor TERM 2550 2081416 - 2081426 + H 71 -6.8 -4.08767 | CGCCACTCTTTTGAT CCTG CTA CAGG TTTTACCCCGATCGG napF 2081559 - 2082053 + | ferredoxin-type protein napD 2082043 - 2082306 + | assembly protein for periplasmic nitrate reductase TERM 2551 2082355 - 2082333 - g 76 -9 -3.73775 | overlap 2082338 CGTAGCTTTATGAAA GCTAACGCCG TTG CGGCGGTTGC GGCGGCTGCCGGTCT TERM 2552 2082350 - 2082338 - g 76 -10.5 -3.30701 | overlap 2082333 CTTTATGAAAGCTAA CGCCG TTG CGGCG GTTGCGGCGGCTGCC napA 2082303 - 2084789 + | nitrate reductase TERM 2553 2084934 - 2084903 - g 81 -12.4 -3.21276 | gap 1, overlap 2084908 GCTGGGGTTACAACA GCAAACCGCACGC GCATCTG GCGTGCGG-TTGC GCCCGCCCGGAGCCA TERM 2554 2084930 - 2084908 - g 90 -12 -3.97088 | overlap 2084903 GGTTACAACAGCAAA CCGCACGC GCATCTG GCGTGCGG TTGCGCCCGCCCGGA napG 2084796 - 2085491 + | quinol dehydrogenase periplasmic component TERM 2555 2086001 - 2086015 + G 88 -11.4 -3.80174 | overlap 2086005 TGGTAATGGGCTTCG GCAGCG GCG CGCTGC TTATTCTCGCGCTGT TERM 2556 2086005 - 2086029 + G 86 -3.5 -5.35815 | overlap 2086001 AATGGGCTTCGGCAG CGGCGCG CTGCTTATTCT CGCGCTG TTTTTATTTGATCTA napH 2085478 - 2086341 + | quinol dehydrogenase membrane component TERM 2557 2086673 - 2086696 + G 70 -5.9 -4.18674 | overlap 2086674 CAGCGACGGCAAAGT GGGCGCGGA AGTGGC TCCGCGTCG TTATTTCTGTCTGCA napB 2086338 - 2086787 + | diheme cytochrome c550 TERM 2558 2086973 - 2086947 - g 81 -6.6 -4.66163 | ACCGGGATGGAAAAA GCCAATACCGAA GAG TTCTGCATTAGC TGCCACGAAATGCGC napC 2086797 - 2087399 + | cytochrome c-type protein NapC ccmA 2087418 - 2088035 + | cytochrome c biogenesis protein CcmA TERM 2559 2088563 - 2088579 + G 72 -10.8 -3.11732 | overlap 2088566 2088570 CTCATCTTTGCCACC GCCGCG ATGGA CGCGGC TTCCATGCATTTGCC ccmB 2088032 - 2088694 + | heme exporter protein B TERM 2560 2089316 - 2089351 + G 90 -7.5 -4.7629 | gap 1, opp_overlap 2089316 GGATGCAGCAAAGTA TCGATCCGGCGATGCG TTCGC CGCTGCGCTGG-TCGA TTTTTGGCTTCCTGC ccmC 2088736 - 2089473 + | heme exporter protein C TERM 2561 2089512 - 2089523 + G 95 -7.2 -5.38047 | GAATTTTTCGCAATG GGCG GTTA CGCC TTTTTTGTCTGGCTG ccmD 2089470 - 2089679 + | heme exporter protein C ccmE 2089676 - 2090155 + | cytochrome c-type biogenesis protein CcmE ccmF 2090152 - 2092095 + | cytochrome c-type biogenesis protein dsbE 2092092 - 2092649 + | disulfide oxidoreductase TERM 2562 2092639 - 2092651 + F 74 -3.3 -5.07486 | AATACAGTAAGGAGG CCGCA CAA TGAGG TTTTTATTGGGCGTG TERM 2563 2093425 - 2093410 - g 72 -4.7 -4.62069 | CCTCGATCCGAAAAA CAGTG ATGCCG CACTG GGTTATGCTGAAGCG ccmH 2092646 - 2093698 + | subunit of heme lyase TERM 2564 2093729 - 2093702 - T 89 -6.3 -5.35815 | gap 1, opp_overlap 2093703 2093705, overlap 2093704 2093705 GAGAGTAAATAAAAA GAGGCCCGATGG TGATG CCATCGGGC-TA TTTTTATTGTGCCCC TERM 2565 2093703 - 2093729 + T 100 -10.8 -5.18726 | opp_overlap 2093702 2093704 2093705, overlap 2093705 AGAGTAAATAAAAAG AGGCCCGATGGT GAT GCCATCGGGCTA TTTTTATTGTGCCCC TERM 2566 2093728 - 2093704 - T 91 -11.4 -4.29436 | opp_overlap 2093703 2093705, overlap 2093702 2093705 GAGTAAATAAAAAGA GGCCCGATGG TGATG CCATCGGGCT ATTTTTATTGTGCCC TERM 2567 2093705 - 2093727 + T 100 -15.6 -4.22377 | opp_overlap 2093704 2093702 2093705, overlap 2093703 AGTAAATAAAAAGAG GCCCGATGGT GAT GCCATCGGGC TATTTTTATTGTGCC TERM 2568 2093727 - 2093705 - T 90 -14.9 -3.16035 | opp_overlap 2093705 2093703, overlap 2093704 2093702 AGTAAATAAAAAGAG GCCCGATGG TGATG CCATCGGGC TATTTTTATTGTGCC narP 2094380 - 2093733 - | transcriptional regulator NarP insB 2095076 - 2094573 - | IS1 ORF2 SBO_2116 2095151 - 2095357 + | putative IS1 encoded protein TERM 2569 2096948 - 2096921 - g 70 -9.8 -3.23853 | overlap 2096919 GTTCGGCAATTAACA CCCGCAACAACG TGAC CACTGATGCGGG AGCTGGTTTTGAGCA yejO 2095354 - 2097687 + | putative ATP-binding component of a transport system TERM 2570 2097729 - 2097698 - f 93 -8.8 -4.73682 | opp_overlap 2097702, overlap 2097702 TCTGATAACAGAAAA TAAACAGGCTGTGA TGTG TCACGGTCTGTTTA TCAAATTAATTGCAG TERM 2571 2097702 - 2097725 + F 80 -9.6 -3.93638 | opp_overlap 2097702 2097698 ATAACAGAAAATAAA CAGGCTGTGA TGTG TCACGGTCTG TTTATCAAATTAATT TERM 2572 2097725 - 2097702 - f 76 -5.2 -4.89519 | opp_overlap 2097702, overlap 2097698 ATAACAGAAAATAAA CAGGCTGTGA TGTG TCACGGTCTG TTTATCAAATTAATT TERM 2573 2097772 - 2097756 - f 100 -8 -5.76633 | opp_overlap 2097756, overlap 2097748 GCAGATATAAAAAAA CCAACC GTAAA GGTTGG TTTTTTCTTGGGATT TERM 2574 2097756 - 2097772 + F 100 -8 -5.4756 | opp_overlap 2097756 2097748 GCAGATATAAAAAAA CCAACC GTAAA GGTTGG TTTTTTCTTGGGATT TERM 2575 2098029 - 2098040 + GF 74 -2.2 -5.12474 | GCCATAACAAAAACC CCAT ATTC GTGG TTTTTCTGTGTTGTG TERM 2576 2098131 - 2098144 + GF 76 -8.1 -4.10672 | CATGCCCACCAGCCA GCGCA ATTT TGCGC TTTGCTTTAAGTTCA SBO_2118 2097956 - 2098216 + | hypothetical protein TERM 2577 2098332 - 2098346 + GT 77 -10 -3.56643 | CTGGTTTCCCCGATG TTCGCC GCT GGCGAA TTTCGAAAATATCAA SBO_2120 2098647 - 2098366 - | hypothetical protein SBO_2119 2098186 - 2098623 + | putative protein encoded by prophage TERM 2578 2098819 - 2098807 - TR 81 -3.4 -5.36364 | TGAAAAATATAAAAA CATG CTTTC CATG AACCGGACATGCGCA SBO_2121 2099269 - 2098928 - | hypothetical protein TERM 2579 2099517 - 2099502 - gR 100 -10.4 -5.03715 | opp_overlap 2099502 2099501 AGGACCCGCAAAAAA GCCGGA TTTC TCCGGC CTTGTCTCAGATGGT TERM 2580 2099502 - 2099517 + Gr 71 -10.4 -2.702 | opp_overlap 2099502, overlap 2099501 AGGACCCGCAAAAAA GCCGGA TTTC TCCGGC CTTGTCTCAGATGGT SBO_2123 2099937 - 2099524 - | hypothetical protein SBO_2122 2099315 - 2099758 + | hypothetical protein SBO_2124 2100285 - 2099950 - | capsid protein small subunit SBO_2125 2101352 - 2100297 - | major capsid protein SBO_2126 2101591 - 2101352 - | hypothetical protein TERM 2581 2101615 - 2101588 - G 100 -14.4 -5.52384 | opp_overlap 2101588 2101594 2101607 CTTCGACTAAAAAAA TCATAACTGGAT GTTT ATCCAGTTATGA TTATAATCAGAATTG TERM 2582 2101588 - 2101615 + g 100 -14.4 -3.41527 | opp_overlap 2101588, overlap 2101594 2101607 CTTCGACTAAAAAAA TCATAACTGGAT GTTT ATCCAGTTATGA TTATAATCAGAATTG TERM 2583 2101754 - 2101724 - R 95 -11.9 -4.23758 | opp_overlap 2101724 2101749 ACCTCATATGCAAAA GCCCGATAAGAAC CCTCT GACCTTATCGGGC TTTTTTTGGGCGCAA TERM 2584 2101724 - 2101754 + r 100 -9.7 -5.40072 | opp_overlap 2101724, overlap 2101749 ACCTCATATGCAAAA GCCCGATAAGAAC CCTCT GACCTTATCGGGC TTTTTTTGGGCGCAA TERM 2585 2101789 - 2101774 - R 100 -10.4 -5.00616 | opp_overlap 2101749 2101774 TTTGGGCGCAAAAAA GCCGGA TTGC TCCGGC TATGTGTGCTGTGTG TERM 2586 2101774 - 2101789 + r 73 -10.4 -3.04983 | opp_overlap 2101774, overlap 2101749 TTTGGGCGCAAAAAA GCCGGA TTGC TCCGGC TATGTGTGCTGTGTG SBO_2127 2102034 - 2101810 - | hypothetical protein TERM 2587 2101983 - 2102004 + g 70 -5.1 -4.40237 | overlap 2101974 2101973 TCGTCTCCATGTTGT CAGCATGGT ATTT ATCACGCTG TTTTAATATCTCATC TERM 2588 2102135 - 2102154 + r 71 -7.8 -3.94746 | opp_overlap 2102137, overlap 2102137 TCAACTGGTGCAAAA AAGCCGGA TTTC TCCGGCTG TTTGATTAGCTGTCC TERM 2589 2102137 - 2102152 + r 79 -10.4 -3.56006 | opp_overlap 2102137, overlap 2102135 AACTGGTGCAAAAAA GCCGGA TTTC TCCGGC TGTTTGATTAGCTGT TERM 2590 2102152 - 2102137 - R 100 -10.4 -5.01732 | opp_overlap 2102137 2102135 AACTGGTGCAAAAAA GCCGGA TTTC TCCGGC TGTTTGATTAGCTGT SBO_2128 2102854 - 2102444 - | putative single stranded DNA-binding protein SBO_2129 2103132 - 2102851 - | hypothetical protein SBO_2131 2104703 - 2103303 - | hypothetical protein SBO_2130 2104691 - 2104978 + | hypothetical protein SBO_2132 2105512 - 2105231 - | hypothetical protein TERM 2591 2105895 - 2105935 + r 85 -6.1 -5.11613 | opp_overlap 2105900, overlap 2105900 GTTTACGTTGTTGGT TAGAAGCCCTGCGAGTG GTAATGA CACTTGCGGGGCTTTGC TTTTTTAAGTGCTCT TERM 2592 2105900 - 2105930 + r 100 -12.6 -4.43669 | opp_overlap 2105900, overlap 2105895 CGTTGTTGGTTAGAA GCCCTGCGAGTG GTAATGA CACTTGCGGGGC TTTGCTTTTTTAAGT TERM 2593 2106336 - 2106346 + r 71 -6.8 -4.19238 | overlap 2106335 GAATCAGAAAGATTC GCAC CAT GTGC TTTTGCCCTTGAGCA TERM 2594 2106541 - 2106521 - R 72 -10.3 -2.924 | opp_overlap 2106521, overlap 2106520 TAATTGTTCAGAAAG GCGGCTCCA TAT CGGGGCCGC TTTTTTCGTGTTTGT TERM 2595 2106521 - 2106541 + r 100 -11.8 -5.34055 | opp_overlap 2106520 2106521 TAATTGTTCAGAAAG GCGGCTCC ATATC GGGGCCGC TTTTTTCGTGTTTGT SBO_2133 2106780 - 2106574 - | hypothetical protein TERM 2596 2106870 - 2106881 + r 82 -5.8 -5.1244 | opp_overlap 2106850 2106870 CCCACCGTTTTTAAA CGGT ATAC ACCG TTTTTATATTGATGA TERM 2597 2106935 - 2106920 - R 100 -10.4 -5.71983 | GGAATTATAAAAAAA GCGGCA TTTC TGCCGC TTCCAGGATTGTTAC SBO_2134 2108517 - 2107276 - | putative CP4-57-type integrase TERM 2598 2107355 - 2107371 + g 91 -8 -5.06505 | AATTCGCCCCACCAG CGCATC AGCAC GATGCG TTTTTCTATGTAGTT TERM 2599 2108663 - 2108687 + r 100 -12.9 -4.39166 | opp_overlap 2108664, overlap 2108664 AAAAACCATAAAAAA ACCCGCTAATC AAG GATTAGCGGGC TTTTCGTGTCTAAAA TERM 2600 2108664 - 2108686 + r 100 -16.4 -3.23018 | opp_overlap 2108664, overlap 2108663 AAAACCATAAAAAAA CCCGCTAATC AAG GATTAGCGGG CTTTTCGTGTCTAAA TERM 2601 2108686 - 2108664 - R 100 -16.4 -5.77632 | opp_overlap 2108664 2108663 AAAACCATAAAAAAA CCCGCTAATC AAG GATTAGCGGG CTTTTCGTGTCTAAA TERM 2602 2108901 - 2108861 - R 71 -9.9 -3.24825 | opp_overlap 2108858, overlap 2108859 2108863 CGATTGCAAGTAAGA TATTTCGCTAACTGATTTA TAA TTAATCAGTTAGCGATAAA ACGCTTCTCGTCTGT TERM 2603 2108899 - 2108863 - R 81 -12.5 -3.18634 | opp_overlap 2108858, overlap 2108861 2108859 ATTGCAAGTAAGATA TTTCGCTAACTGATTTA TAA TTAATCAGTTAGCGATA AAACGCTTCTCGTCT yejM 2110647 - 2108887 - | putative sulfatase TERM 2604 2109810 - 2109797 - G 76 -8.1 -4.25104 | opp_overlap 2109799 2109806, overlap 2109780 TTTTGCTCAGCAAAA CCTGC CAGC GCAGG CATCTGCTTCTCGAA TERM 2605 2110249 - 2110215 - G 81 -6.5 -4.78572 | gap 1, overlap 2110218 GTTCAAGCAATAAAA TAACCGGCACGCTGAT GAAC ATCAGC-TGCCAGTCG CGCGCCATCTCATTT TERM 2606 2110246 - 2110218 - G 93 -10.4 -4.48997 | gap 1, overlap 2110215 CAAGCAATAAAATAA CCGGCACGCTGAT GAAC ATCAGC-TGCCAG TCGCGCGCCATCTCA yejL 2110894 - 2110667 - | hypothetical protein TERM 2607 2110934 - 2110945 + H 100 -5.8 -6.04378 | opp_overlap 2110922 2110934 AAGGGCAACATATTA CCGT AGCA ACGG TTTTTTTTCTGCTTT yejK 2111076 - 2112083 + | nucleoid-associated protein NdpA TERM 2608 2112206 - 2112177 - T 93 -15.9 -2.90219 | opp_overlap 2112184, overlap 2112184 CATAATCTGCAGATA CAAAAAACCCCGC CGGA GCGGGGTTTTTTA CAACTTATTCAGCAA TERM 2609 2112184 - 2112199 + T 100 -11.8 -5.06103 | opp_overlap 2112184 2112177 TGCAGATACAAAAAA CCCCGC CGGA GCGGGG TTTTTTACAACTTAT TERM 2610 2112199 - 2112184 - T 100 -11.8 -5.4251 | opp_overlap 2112184, overlap 2112177 TGCAGATACAAAAAA CCCCGC CGGA GCGGGG TTTTTTACAACTTAT rplY 2112506 - 2112222 - | 50S ribosomal protein L25 yejH 2114391 - 2112631 - | putative ATP-dependent helicase rsuA 2114540 - 2115235 + | 16S rRNA pseudouridylate synthase A TERM 2611 2115586 - 2115613 + F 73 -11.2 -2.59055 | overlap 2115585 2115574 2115588 GATGCGTTTTTTCCA CGGGCTGGCTGC GGCT GCGGCCAGCATG GTTATCAACGCTTTG TERM 2612 2115588 - 2115611 + F 72 -10.2 -2.83119 | overlap 2115586 2115585 2115574 TGCGTTTTTTCCACG GGCTGGCTGC GGCT GCGGCCAGCA TGGTTATCAACGCTT TERM 2613 2115771 - 2115785 + F 79 -11.4 -3.41878 | ACATCTTCTGGATCC TCGCCG TGG CGGCGA TTCTGGCTTCGGCAA TERM 2614 2116462 - 2116479 + F 76 -7.7 -4.26202 | opp_overlap 2116462 TCTATTGCACAACGA GGAAGCT AAAA GGCTTCC TTTGTTGATGCATGT yejG 2116779 - 2117123 + | hypothetical protein yejF 2118716 - 2117127 - | putative ATP-binding component of a transport system yejE 2119743 - 2118718 - | putative transport system permease protein TERM 2615 2118878 - 2118858 - G 70 -11.2 -2.73875 | overlap 2118855 TCCCTTGTAACAGCA GTTCACCG AGTGA CGGTGAAC CGAGCGGCAGACCGA yejB 2120837 - 2119743 - | putative transport system permease protein TERM 2616 2119992 - 2119947 - G 80 -5.3 -5.02074 | overlap 2119960 CGAGCCGGTAAAAAA CATGCTGATAAACGTCGCCGG AAAA CCGGCAATCACCAGCAGCATG GCGTTGCGGAACACA yejA 2122652 - 2120838 - | hypothetical protein TERM 2617 2121618 - 2121636 + g 100 -13.2 -3.75105 | GTTCGTGCGACTCCA GGCGTTGT AAA ACAACGCC TTGTTCATCCATTCA TERM 2618 2121757 - 2121776 + g 79 -2.2 -5.25803 | gap 1, overlap 2121759 2121760 GCTGATTCGTTCTTT TGC-TCATC TTT GATGATGTA TTTTTTATCGAAATT rtn 2124290 - 2122734 - | hypothetical protein TERM 2619 2123008 - 2122990 - G 71 -9.6 -3.50447 | overlap 2122972 2123002 TCAATTTTCAGATAA TCGAGCGT AAA ACGCTCAA GATAGATAAGCGCGC TERM 2620 2123586 - 2123574 - G 70 -4.1 -4.72272 | GCCGCCCAGTAAAAA TGCGT ACC ACACA TCGTTCCATGTCCAG TERM 2621 2124404 - 2124421 + r 86 -11.3 -3.77219 | opp_overlap 2124404 AATGAAAACAAAAAA GCACTGC CTAA GCAGTGC TTTCAGTTAACTCGT TERM 2622 2124421 - 2124404 - R 100 -11.3 -5.85244 | opp_overlap 2124404 AATGAAAACAAAAAA GCACTGC CTAA GCAGTGC TTTCAGTTAACTCGT spr 2125037 - 2124471 - | putative outer membrane lipoprotein TERM 2623 2124561 - 2124548 - G 70 -6.7 -4.08557 | overlap 2124550 TGCTGGAAATAATAA CACCA CTGC TGGTG GAAGCATGGACAAAC TERM 2624 2125100 - 2125089 - R 79 -2.2 -5.61596 | ATCGTTATAAAAAAA TGCC AAGC GACA CGAGACTAATTACCT SBO_2150 2126198 - 2125449 - | hypothetical protein TERM 2625 2125901 - 2125911 + g 75 -4.6 -4.86731 | TCACGATACGTCGTC TGCC TGG GGCG TTTTCTTTCAGCCAG TERM 2626 2126141 - 2126151 + g 73 -4 -4.81734 | opp_overlap 2126141 TATTCAACAACACTA TTTG CGG CAAA TTTTTAATCATATTT yeiR 2127187 - 2126201 - | hypothetical protein TERM 2627 2127294 - 2127256 - R 76 -8.1 -4.03183 | opp_overlap 2127263 AGGCAGAAAAGAGAA GGGGAGAGCGGACGAAG GTGAG CTTCATCCGCTTTAACC GCAGAAATCGTTAAA TERM 2628 2127263 - 2127287 + r 75 -10 -3.53091 | opp_overlap 2127256 AAAGAGAAGGGGAGA GCGGACGAAG GTGAG CTTCATCCGC TTTAACCGCAGAAAT yeiQ 2128771 - 2127305 - | putative oxidoreductase TERM 2629 2128954 - 2128973 + r 72 -5.6 -4.42386 | opp_overlap 2128954 TAATAAATTAAAAAA GGGGCAGC CTGA GCTATCCC TTTTCTGCATGCGGC TERM 2630 2128973 - 2128954 - R 88 -5.6 -5.46129 | opp_overlap 2128954 TAATAAATTAAAAAA GGGGCAGC CTGA GCTATCCC TTTTCTGCATGCGGC yeiP 2129566 - 2128994 - | elongation factor P TERM 2631 2129742 - 2129761 + r 73 -10 -3.36823 | gap 1, overlap 2129730 2129738 TGCCGTCCGGGTTGC GGGGC-GTG TTG CACTGCCCC TTCAATTTTCAGCCC yeiO 2131153 - 2129972 - | putative transport TERM 2632 2131356 - 2131346 - H 89 -5.4 -5.77632 | AAAATGACAAAAAAA TGTG CAG CACA TCAAACTTTTGCTCA TERM 2633 2131433 - 2131469 + H 86 -2.9 -5.67063 | overlap 2131456 2131457 TCTTGAAACGTTTCA GCGCGATCTTGTCTT TAACCCT AAGCCAGGTTGGCGC TTTTTTTCTCATAGA fruB 2131521 - 2132651 + | bifunctional fructose-specific PTS IIA/HPr protein fruK 2132651 - 2133589 + | 1-phosphofructokinase TERM 2634 2133876 - 2133897 + G 74 -10.9 -3.14344 | gap 1, opp_overlap 2133894 AAACCTTACACTGCG CCGGTCGCTG CGA CAGC-ACCGG TTGCTGCCAGCGGTC fruA 2133606 - 2135297 + | fructose-specific PTS system IIBC component TERM 2635 2135343 - 2135303 - T 78 -6.1 -4.66318 | opp_overlap 2135307, overlap 2135304 2135305 AGCAGCGTAATAAAA GGTGTGTTACAGGGCAGAA ATT TCCTGCCCTGTAACATTTG ATGAGCGCAAAGAGA TERM 2636 2135342 - 2135304 - T 73 -9.6 -3.39068 | opp_overlap 2135307, overlap 2135303 2135305 GCAGCGTAATAAAAG GTGTGTTACAGGGCAGAA ATT TCCTGCCCTGTAACATTT GATGAGCGCAAAGAG TERM 2637 2135341 - 2135305 - T 81 -13.1 -2.62958 | opp_overlap 2135307, overlap 2135304 2135303 CAGCGTAATAAAAGG TGTGTTACAGGGCAGAA ATT TCCTGCCCTGTAACATT TGATGAGCGCAAAGA TERM 2638 2135307 - 2135339 + T 100 -17.9 -3.72576 | opp_overlap 2135305 2135304 2135303 GCGTAATAAAAGGTG TGTTACAGGGCAGAA ATT TCCTGCCCTGTAACA TTTGATGAGCGCAAA TERM 2639 2135456 - 2135473 + T 93 -7 -5.64873 | GGTTATTTCCTCAAG GGCAGA TTATTT TCTGCC TTTTTTATTGTTCCC SBO_2158 2135915 - 2135745 - | putative IS1 encoded protein insB 2136008 - 2136511 + | IS1 ORF2 TERM 2640 2137234 - 2137192 - T 73 -4 -4.87803 | opp_overlap 2137194, overlap 2137194 TACGTGCAAACAAAA TACCACCTGGGATCGCCATC AGC GATGCCGCTAACAGGTAGTC AATTGGTACGCCCAT TERM 2641 2137321 - 2137367 + T 87 -10.2 -4.07568 | overlap 2137324 CGGTAAACAACTCGT TGCGATTCATGCGATCGATAAA CGG TTTAACGATCGCCGGGATCTCA TTTTGCCCGAGGAAA TERM 2642 2137324 - 2137364 + T 73 -10.5 -3.08032 | overlap 2137321 TAAACAACTCGTTGC GATTCATGCGATCGATAAA CGG TTTAACGATCGCCGGGATC TCATTTTGCCCGAGG TERM 2643 2137857 - 2137874 + T 81 -8.3 -4.39287 | opp_overlap 2137857 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA TERM 2644 2137874 - 2137857 - T 83 -10.5 -3.74693 | opp_overlap 2137857 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA yeiN 2138814 - 2137924 - | hypothetical protein TERM 2645 2137963 - 2137975 + g 73 -9.1 -3.67597 | TTTGGCAATTTCACT CGCCA GAA TGGCG TTGTTGAATACCAGC TERM 2646 2138529 - 2138539 + g 74 -3.2 -5.00616 | TCGTTGAAGCCACAG TGGT TGC GCCA TTTTTTCCGGCGGCA TERM 2647 2139187 - 2139230 + r 72 -10.3 -2.85056 | gap 1, overlap 2139186 TTTGCCACATCTTCA CGCCCTGACAGCGCAATCCC ACTCA GGGTTTCCGCT-TCAAGGCG GTTTGGCTTCAGAGT TERM 2648 2139618 - 2139645 + r 75 -6.2 -4.42619 | opp_overlap 2139598 TACGGCGCTCAGTAG CCAGGCTTTGTT CCCC AGCAACGCCAGG TTTTGTGCAATATTG insB 2140280 - 2139777 - | IS1 ORF2 SBO_2164 2140373 - 2140543 + | putative IS1 encoded protein TERM 2649 2141210 - 2141187 - g 90 -11.8 -3.92324 | opp_overlap 2141184 2141187 CCCGCTAATACCAAA GTCGGCATCA CTAT TGATACCGAC TGGTTCTGGGGCTTA yeiK 2140536 - 2141264 + | hypothetical protein TERM 2650 2141990 - 2142005 + G 81 -9 -4.00756 | overlap 2141997 GGCATCGTTAATGGC GATCCC AGGC GGGATC TTGTTTGCTCGCCTG yeiJ 2141364 - 2142614 + | putative transport system permease protein yeiI 2143758 - 2142670 - | hypothetical protein TERM 2651 2143357 - 2143373 + g 82 -9.3 -4.15044 | opp_overlap 2143345 2143341 2143355 GCAGCCGGAGACATT CACGCCG GCA CGGCGCG TTTCTTCCAGGAGCA TERM 2652 2143530 - 2143555 + g 73 -11.9 -2.57274 | opp_overlap 2143533, overlap 2143529 2143527 CCGCTTGCGGGTAAC GGATATCCGCG ATCC CGCGAATATCC ATATTGATTGTCCCC nfo 2144618 - 2143761 - | endonuclease IV yeiH 2145741 - 2144692 - | hypothetical protein TERM 2653 2144772 - 2144790 + g 71 -2.2 -5.00884 | GTACCAGTGCCATCA GCAGAGGT TTC GCCCCGGC TTTTTTCAGCGCGCT TERM 2654 2145044 - 2145070 + g 70 -6.6 -4.11216 | opp_overlap 2145063 GCCAGCATCATCACG CGCAGCATTT TGGAAAT AACTGCTGCG TTTTCCGCATCCGGG yeiE 2145841 - 2146722 + | putative DNA-binding transcriptional regulator TERM 2655 2147499 - 2147534 + G 70 -6.8 -4.08945 | gap 1, opp_overlap 2147510 2147511, overlap 2147511 GCCTGCGGGCTGGAG CAACTGGACAATCGGCG AAG CGCCGTTTG-CTGGTGG TTTTGCGGCGATGAT TERM 2656 2147511 - 2147523 + G 84 -10.5 -3.83705 | opp_overlap 2147510 2147511, overlap 2147499 GAGCAACTGGACAAT CGGCG AAG CGCCG TTTGCTGGTGGTTTT lysP 2146927 - 2148396 + | lysine transporter TERM 2657 2148418 - 2148437 + T 100 -13.6 -4.75776 | TCCCTTCCTTGCTAA GCCCTCTC AACC GAGAGGGC TTTTTCAATTCCATT TERM 2658 2150489 - 2150475 - T 77 -9.2 -3.87373 | TATACCGGGCAGAAA CGCGCC GAC AGCGCG ACGGCTAAAACACCG TERM 2659 2150694 - 2150679 - T 76 -11.8 -2.56271 | opp_overlap 2150676 2150676, overlap 2150678 TTCTGATGAGAAGAT GCCCGG CGAA CCGGGC GGACTTTCACTTCAG yeiG 2151537 - 2150701 - | putative esterase TERM 2660 2151248 - 2151235 - G 70 -3.7 -4.70583 | GGCATTAAGATAAAA GCCTG CGCC CTGGC CTAAATCGTAGCCAT folE 2151795 - 2152463 + | GTP cyclohydrolase I TERM 2661 2152577 - 2152547 - g 71 -9.1 -3.44848 | gap 1, opp_overlap 2152550 2152550, overlap 2152545 2152550 TCCTGCTATTAAACA TCAG-CGCCTTTGG GCTA CCAAAGGCGGCTTA TCTCAATCCCGCCTG TERM 2662 2152573 - 2152550 - g 71 -11 -2.87501 | opp_overlap 2152550 2152550, overlap 2152547 2152545 TGCTATTAAACATCA GCGCCTTTGG GCTA CCAAAGGCGG CTTATCTCAATCCCG TERM 2663 2152550 - 2152574 + G 78 -10.8 -3.51924 | gap 1, opp_overlap 2152547 2152545 2152550, overlap 2152550 TGCTATTAAACATCA G-CGCCTTTGG GCTA CCAAAGGCGGC TTATCTCAATCCCGC TERM 2664 2152550 - 2152573 + G 70 -11 -2.7094 | opp_overlap 2152547 2152545 2152550, overlap 2152550 TGCTATTAAACATCA GCGCCTTTGG GCTA CCAAAGGCGG CTTATCTCAATCCCG TERM 2665 2152884 - 2152868 - g 84 -8 -4.59773 | CGCCATCGGTAAAAA GCCTGT TTAAT ACAGGC GTCATGCTTTATCTG yeiB 2152480 - 2153637 + | hypothetical protein galS 2153779 - 2154819 + | DNA-binding transcriptional regulator GalS TERM 2666 2155996 - 2155980 - g 70 -4.3 -4.57569 | TGATCTGGCGAAAAA CCTGGCC GAT GGCAAAG GTGCGGCTGATGGCA mglB 2155099 - 2156097 + | galactose-binding transport protein TERM 2667 2156106 - 2156128 + F 100 -14.9 -3.88232 | opp_overlap 2156098, overlap 2156102 GAAATAAGACTGATT GGGCGCAGT CGTTT ACTGCGCCC TTATTGTATGGCCAA TERM 2668 2156798 - 2156783 - g 78 -7.6 -4.38154 | opp_overlap 2156783 2156782 ATATCTCGCATAAAA TGGAAG AAAT CTTCCA GTTATGTGATGAAGT TERM 2669 2157669 - 2157632 - g 93 -8.5 -4.96848 | opp_overlap 2157636 2157638 TTGTCGACACAAAAA CAACAACGCAAAACGAA ATTC TGCGTCTTGCGTCTTTG CACCTTTAAGATTAG mglA 2156158 - 2157678 + | galactose/methyl galaxtoside transporter ATP-binding protein mglC 2157694 - 2158704 + | beta-methylgalactoside transporter inner membrane component TERM 2670 2159412 - 2159423 + T 72 -5.8 -4.54821 | opp_overlap 2159412, overlap 2159421 ATTTACCGTTAACGA TCGG CATA CCGA TTTTCTGATTAAGAT SBO_2181 2160649 - 2159744 - | insertion element IS2 transposase InsD SBO_2182 2160972 - 2160607 - | insertion sequence 2 OrfA protein TERM 2671 2161057 - 2161080 + r 79 -4.6 -5.17353 | gap 1, overlap 2161061 GGAGATTCAGGGGGC CAGTCTACCAG GGG CTGGT-GGTTG TTTTTTCATGGGTGT TERM 2672 2161061 - 2161077 + r 84 -8.7 -4.67552 | overlap 2161057 ATTCAGGGGGCCAGT CTACCAG GGG CTGGTGG TTGTTTTTTCATGGG ycaN 2163299 - 2162391 - | putative transcriptional regulator LYSR-type ycaK 2163399 - 2163989 + | hypothetical protein SBO_2186 2164165 - 2163959 - | putative IS1 encoded protein insB 2164240 - 2164743 + | IS1 ORF2 TERM 2673 2164835 - 2164812 - T 100 -13.2 -5.4505 | opp_overlap 2164812 GCGCGGAATAAAAAA GCGGCAACTC AATA AAGTTGCCGC TTTACGGGGAAATTA TERM 2674 2164812 - 2164835 + T 88 -12.5 -3.53761 | opp_overlap 2164812 GCGCGGAATAAAAAA GCGGCAACT CAATAA AGTTGCCGC TTTACGGGGAAATTA pflA 2165588 - 2164848 - | pyruvate formate lyase-activating enzyme 1 TERM 2675 2165283 - 2165266 - G 71 -2.7 -4.75219 | gap 1 TAACGACGAACAAAA CCGT-TGG TGT CCAGACAG GTATGAATGCCTTCT TERM 2676 2165411 - 2165394 - G 72 -7.7 -3.87869 | opp_overlap 2165394 GGAAGCGTTCATAAA GTGGCGA TAGG TCACCAC TTCCTTCATCAAATC TERM 2677 2165705 - 2165749 + r 82 -7.2 -4.80882 | gap 1, opp_overlap 2165718, overlap 2165706 2165718 TGACAAAAAAGGCTC TCGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACGC TTTTTACTGTACGAT TERM 2678 2165706 - 2165748 + r 79 -10.7 -3.47806 | gap 1, opp_overlap 2165718, overlap 2165705 2165718 GACAAAAAAGGCTCT CGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACG CTTTTTACTGTACGA TERM 2679 2165718 - 2165737 + r 83 -9.2 -4.33851 | opp_overlap 2165718, overlap 2165706 2165705 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT TERM 2680 2165737 - 2165718 - R 100 -11.4 -5.00616 | opp_overlap 2165706 2165705 2165718 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT pflB 2168062 - 2165780 - | formate acetyltransferase 1 focA 2168974 - 2168117 - | formate transporter TERM 2681 2169328 - 2169306 - R 74 -11.3 -2.86654 | opp_overlap 2169306, overlap 2169305 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC TERM 2682 2169347 - 2169377 + r 70 -2.5 -5.07652 | opp_overlap 2169347 2169354, overlap 2169352 2169354 TATAACTCAGACTAA TCATTAAGCCTAC ATTGC GTAGGCTATTTGA TTTTATTTTGCCCAG TERM 2683 2169352 - 2169372 + r 72 -5.4 -4.41486 | opp_overlap 2169347 2169354, overlap 2169347 2169354 CTCAGACTAATCATT AAGCCTAC ATTGC GTAGGCTA TTTGATTTTATTTTG ycaO 2171149 - 2169380 - | hypothetical protein TERM 2684 2169726 - 2169736 + g 75 -6.8 -4.41047 | overlap 2169721 TCGCCACCAGCCAGC GCCA GCA TGGC TTTTAATTCACCGAT TERM 2685 2171297 - 2171314 + G 77 -6.3 -4.62054 | CGATCTCCACCGTAT GGCATTT GATA AAGTGCC TTTTGATTTCCTTGG ycaP 2171271 - 2171963 + | hypothetical protein TERM 2686 2172779 - 2172758 - g 71 -3 -4.82901 | gap 1, opp_overlap 2172775, overlap 2172760 TGGCGCGCAGAAAAA TATC-GGCC CGGCT GGCCTGACA ATCGTCATCGTTCGT serC 2172162 - 2173250 + | phosphoserine aminotransferase TERM 2687 2173270 - 2173290 + F 100 -12.6 -5.4659 | GAAATTTTGCTTAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG aroA 2173321 - 2174604 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2688 2174666 - 2174695 + T 89 -9.3 -4.59109 | overlap 2174668 CGGCACATTGTCGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2689 2174668 - 2174693 + T 100 -16.3 -3.90762 | overlap 2174666 GCACATTGTCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_2195 2175315 - 2174677 - | IS4 orf SBO_2196 2176024 - 2175434 - | IS4 orf TERM 2690 2176039 - 2176014 - G 100 -9.8 -5.61596 | opp_overlap 2176014 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 2691 2176014 - 2176039 + g 73 -9.1 -3.61398 | opp_overlap 2176014 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 2692 2177092 - 2177112 + H 76 -8.9 -3.66784 | opp_overlap 2177105, overlap 2177105 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC TERM 2693 2177468 - 2177505 + G 81 -10.5 -3.57561 | opp_overlap 2177434, overlap 2177457 2177446 AAGTCGCGACATTCC CACGCGTTCGTGAAGCA TTAT TGCGTCGCCAACGCGCG TTTCGCGAATTACCA TERM 2694 2177701 - 2177689 - g 70 -6.9 -4.04806 | GCCGAGATCAAAGAA CGCGA CGA CCGCG ATCGTAACCGAGCGG TERM 2695 2177809 - 2177794 - g 70 -4 -4.68424 | gap 1, overlap 2177803 2177805 CAAGTGATTGAAAAA GCGC-TA CAA TACGCGC GCCAGAAATTGGCTC cmk 2177149 - 2177832 + | cytidylate kinase TERM 2696 2178117 - 2178107 - g 88 -8.2 -4.63527 | overlap 2178108 2178109 TGAGCAGTTCAAAAA CGCC CAG GGCG AGCTGGAAATCCAGG rpsA 2177943 - 2179616 + | 30S ribosomal protein S1 TERM 2697 2179627 - 2179648 + F 87 -9.5 -4.29929 | overlap 2179621 AGTAATTCTCTGACT CTTCGGGAT TTTT ATTCCGAAG TTTGTTGAGTTTACT TERM 2698 2179725 - 2179695 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 2179702, overlap 2179698 2179702 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAGCAACAGCA TERM 2699 2179723 - 2179698 - f 93 -15.5 -2.84098 | opp_overlap 2179702, overlap 2179695 2179702 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAGCAACAG TERM 2700 2179702 - 2179719 + F 86 -14.1 -3.18264 | opp_overlap 2179702 2179698 2179695 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA TERM 2701 2179719 - 2179702 - f 90 -14.1 -3.30554 | opp_overlap 2179702, overlap 2179698 2179695 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA ihfB 2179776 - 2180060 + | integration host factor subunit beta TERM 2702 2180082 - 2180112 + F 83 -9.8 -4.08706 | opp_overlap 2180090, overlap 2180083 2180090 ACTCAAACTTGAACG CGAGAAAAGCACCT GTC GGGTGCTTTTTTCA TTTCTCTAATCAGGA TERM 2703 2180083 - 2180111 + F 82 -13.3 -3.04902 | opp_overlap 2180090, overlap 2180082 2180090 CTCAAACTTGAACGC GAGAAAAGCACCT GTC GGGTGCTTTTTTC ATTTCTCTAATCAGG TERM 2704 2180104 - 2180090 - f 77 -7.1 -4.42788 | opp_overlap 2180083 2180082 2180090 TTGAACGCGAGAAAA GCACC TGTCG GGTGC TTTTTTCATTTCTCT TERM 2705 2180090 - 2180104 + F 95 -7.8 -5.4387 | opp_overlap 2180090, overlap 2180083 2180082 TTGAACGCGAGAAAA GCACCT GTC GGGTGC TTTTTTCATTTCTCT TERM 2706 2180921 - 2180908 - g 79 -3.9 -5.13137 | CAAAGAAATCAAAAA TATCA TGCG TGATA CTGGAACGGCGCATT TERM 2707 2181252 - 2181278 + G 79 -3.6 -5.14965 | overlap 2181255 2181256 CGCAAAGTTTATGGC TCTCTGCCGC TGCGGTC GCGGCACTGA TTTTTTGGTACCAGT ycaI 2180267 - 2182435 + | hypothetical protein msbA 2182576 - 2184324 + | lipid transporter ATP-binding/permease protein TERM 2708 2184356 - 2184375 + G 75 -11.4 -2.88677 | overlap 2184358 TGGTGAATCCCCTTT GTGGCGGC TATT GCTGCCAC TCTCCTGGTTGTATG TERM 2709 2184456 - 2184432 - g 75 -5.5 -4.61873 | overlap 2184437 TGCTATAAACTAAAA CTGAAGCGCGC CTG GCGTGCCCCCG TACCGGTTGTCGTGG TERM 2710 2184727 - 2184717 - g 70 -6.8 -4.09685 | TCTGATGCGGTAAAA GCCA TTC TGGC GCAACACCCTGATGT TERM 2711 2185025 - 2185049 + G 74 -2.9 -5.0133 | gap 2, overlap 2185025 2185026 ACATGTAGTGGCGAT G-GCGG-GGAT TGGGC ATCCGCCGCGC TTTTTTGCCACGCTG lpxK 2184321 - 2185307 + | tetraacyldisaccharide 4'-kinase TERM 2712 2186242 - 2186253 + G 74 -2.2 -5.10154 | gap 1, opp_overlap 2186242 TCTGGGATCGCAAAC GC-GC AGA GCAGC TTTTTGATTTTAGCT TERM 2713 2186302 - 2186312 + G 70 -6.8 -4.00512 | opp_overlap 2186301 2186302 CCCCAGCGCCGAAAC GCCA GTA TGGC TATTTTGTTCTGCCA ycaQ 2185344 - 2186576 + | hypothetical protein ycaR 2186628 - 2186810 + | hypothetical protein kdsB 2186807 - 2187553 + | 3-deoxy-manno-octulosonate cytidylyltransferase SBO_2207 2187707 - 2188600 + | hypothetical protein ycbC 2189356 - 2188577 - | hypothetical protein TERM 2714 2190038 - 2190023 - g 100 -2.4 -5.93252 | overlap 2190025 CCGAAAAAGAAAAAA CGGACG CTTT CGCCAG ATTATCCACGCGACC smtA 2189492 - 2190277 + | putative metallothionein SmtA TERM 2715 2191414 - 2191385 - g 70 -5.7 -4.36914 | gap 1, opp_overlap 2191412 TTGCCGTGTACAAAA CCAGA-CAAGTGCC GCT GGATCTTGGTCTGG TGGTACGCGAATATC TERM 2716 2191444 - 2191469 + G 81 -10.5 -3.58505 | gap 1, opp_overlap 2191440, overlap 2191412 2191440 CTGTCACAGTATCCG CGTGC-ACGTCA CTT TGACGTTGCGCG TATTGTTATTGATCA mukF 2190274 - 2191596 + | condesin subunit F TERM 2717 2191648 - 2191663 + G 70 -10.4 -3.17075 | GAATCCGTTATTTCC GGCGCT GGAC AGCGCC TTACGTTCAGGCCGC mukE 2191604 - 2192281 + | condesin subunit E TERM 2718 2193516 - 2193470 - g 70 -6.5 -4.15565 | gap 1, opp_overlap 2193462, overlap 2193474 TGGACGAGCTGAAAA GCCAGCTTGCT-GACTACCAGC AGGC GCTGGACGTCCAGCAAACGCGC GCGATCCAGTATAAC TERM 2719 2193668 - 2193653 - g 81 -4.7 -5.10497 | AAGCGACTGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC TERM 2720 2195675 - 2195661 - g 72 -8.5 -3.82202 | opp_overlap 2195672 CATGGTGAAAGATAA CGGCG TTGAG CGCCG CTTACACCGTCGTGA mukB 2192281 - 2196741 + | cell division protein MukB TERM 2721 2196769 - 2196744 - T 73 -7.5 -4.1899 | opp_overlap 2196748, overlap 2196748 TCAGGCGAGTTAAAA TTAAGGCGGCA GCAA TGCCGCCTTTT CTTTTTCCGAAAACT TERM 2722 2196748 - 2196765 + T 100 -12.7 -5.26119 | opp_overlap 2196744 2196748 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 2723 2196765 - 2196748 - T 93 -12.7 -3.69605 | opp_overlap 2196748, overlap 2196744 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 2724 2196822 - 2196851 + T 89 -9.3 -4.59109 | opp_overlap 2196815, overlap 2196824 GCACATAACGGCGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2725 2196824 - 2196849 + T 100 -16.3 -3.90762 | opp_overlap 2196815, overlap 2196822 ACATAACGGCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG insB 2197545 - 2197042 - | IS1 ORF2 SBO_2214 2198316 - 2197768 - | IS4 orf SBO_2215 2198956 - 2198366 - | IS4 orf TERM 2726 2198971 - 2198946 - G 100 -9.8 -5.61596 | opp_overlap 2198946 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 2727 2198946 - 2198971 + g 73 -9.1 -3.61398 | opp_overlap 2198946 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC ycbB 2199217 - 2201064 + | hypothetical protein ycbK 2201245 - 2201793 + | hypothetical protein ycbL 2201820 - 2202467 + | hypothetical protein TERM 2728 2202499 - 2202481 - T 100 -10.2 -5.38951 | opp_overlap 2202480 AAGGCACATAAAAAA GCCCGCTT TTA ATGCGGGC CTGGATTTCTGGCAA TERM 2729 2202646 - 2202678 + T 71 -3.4 -4.81083 | gap 1, overlap 2202651 2202654 TGTTGCGTTTGTCAT CAGTCTCAGCCCGCT TTTC AGCGGGCTTC-ATTG TTTTTAATGCTTACA TERM 2730 2202651 - 2202675 + T 70 -5 -4.50218 | gap 1, overlap 2202646 2202654 CGTTTGTCATCAGTC TCA-GCCCGCT TTTC AGCGGGCTTCA TTGTTTTTAATGCTT TERM 2731 2202654 - 2202671 + T 93 -12.7 -3.75772 | overlap 2202651 2202646 TTGTCATCAGTCTCA GCCCGCT TTTC AGCGGGC TTCATTGTTTTTAAT aspC 2203879 - 2202689 - | aromatic amino acid aminotransferase TERM 2732 2203366 - 2203388 + g 70 -9.9 -3.18912 | ACAGCACTACGTCGC CAGCCTGAG CTTCA TTCAGGCTG TTAATCAGTGCATCG TERM 2733 2204032 - 2204017 - R 100 -9 -5.97575 | opp_overlap 2204017 AAGGTATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA TERM 2734 2204017 - 2204032 + r 100 -9 -5.07107 | opp_overlap 2204017 AAGGTATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA ompF 2205152 - 2204064 - | outer membrane protein F TERM 2735 2204584 - 2204604 + g 70 -4.7 -4.57569 | gap 1, opp_overlap 2204569 2204561 2204584, overlap 2204586 CCGTCGCCGTTAGAA CG-GCGTG CAGTGT CACGCTCG TTTTTACCCAGGTAC TERM 2736 2205578 - 2205602 + r 76 -2.1 -5.28176 | opp_overlap 2205578 2205582 CAGCTAAGAAAAAAC TAATCCGCAAT AAG AGTACGGGTTA TTTTTTGTGCGTAAA TERM 2737 2205719 - 2205738 + r 93 -13.6 -3.53091 | opp_overlap 2205719 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT TERM 2738 2205738 - 2205719 - R 100 -13.6 -5.43621 | opp_overlap 2205719 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT asnC 2207153 - 2205753 - | asparaginyl-tRNA synthetase TERM 2739 2207313 - 2207296 - R 100 -9.1 -5.22943 | opp_overlap 2207293 ATTAAAGGTAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG pncB 2208524 - 2207322 - | nicotinate phosphoribosyltransferase TERM 2740 2211332 - 2211320 - g 70 -4.7 -4.47328 | overlap 2211321 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAACAGTTGAAAGG pepN 2208790 - 2211402 + | aminopeptidase N TERM 2741 2211406 - 2211443 + T 75 -9.8 -3.63589 | opp_overlap 2211410, overlap 2211407 2211437 2211438 GCACTGGCTTGATAA ATAACCGAATGGCGGC AATAGC GCCGCCATTCGGGGAA TTTACCCCTGTTTTC TERM 2742 2211407 - 2211442 + T 82 -13.3 -2.77431 | opp_overlap 2211410, overlap 2211406 2211437 2211438 CACTGGCTTGATAAA TAACCGAATGGCGGC AATAGC GCCGCCATTCGGGGA ATTTACCCCTGTTTT TERM 2743 2211439 - 2211410 - T 100 -20.1 -4.06419 | opp_overlap 2211407 2211406 2211437 2211438 TGGCTTGATAAATAA CCGAATGGCGGCA ATAG CGCCGCCATTCGG GGAATTTACCCCTGT TERM 2744 2212973 - 2212983 + T 74 -6.8 -4.27694 | TAACCACTTCTTCAC TGGC GTT GCCA TTATTTCTTCCTTAG ycbO 2215096 - 2214137 - | alkanesulfonate transporter substrate-binding subunit TERM 2745 2214181 - 2214193 + g 74 -3.3 -5.00616 | GCTGCCAGATGCGCT GGCGA ATA TCGAC TTTTTTCGGCACCAG ycbP 2215664 - 2215089 - | NAD(P)H-dependent FMN reductase insB 2216623 - 2217126 + | IS1 ORF2 TERM 2746 2217672 - 2217692 + G 72 -6.9 -4.18494 | TTAATGCCGAAGATT TTGACGATA TCT TCTCGTCAA TTTTCGGTCAGCATG TERM 2747 2218192 - 2218178 - g 86 -6.4 -5.14563 | overlap 2218160 CTGGTGAGCAAAAAA CAGACC GGC GATCTG TATGCGGTACTGAAA cbpA 2217392 - 2218312 + | curved DNA-binding protein CbpA TERM 2748 2218596 - 2218566 - g 85 -14 -2.74563 | opp_overlap 2218564 2218563, overlap 2218572 TGCACACCTGAAGCA GGAAAACCGCCTGC TAC GCCAGCGGCTTTCC CGGTTTGTAGCTCAT TERM 2749 2218590 - 2218572 - g 78 -8 -4.3534 | opp_overlap 2218564 2218563, overlap 2218566 CCTGAAGCAGGAAAA CCGCCTGC TAC GCCAGCGG CTTTCCCGGTTTGTA yccD 2218312 - 2218617 + | chaperone-modulator protein CbpM TERM 2750 2218674 - 2218688 + T 71 -7.1 -4.08216 | opp_overlap 2218665 2218664 2218683 2218684 CATAATGCCTGATGC GACGC TAAAC GCGTC TTTTCAGGCGCATAA torD 2219309 - 2218710 - | chaperone protein TorD TERM 2751 2219090 - 2219067 - G 85 -6.6 -4.75372 | overlap 2219069 2219083 ATCAGTCATCAAAAA CAGGCCGC AAAAGTCA GCGGCCAG TTCCAGACGGGCATC TERM 2752 2219088 - 2219069 - G 72 -7.8 -3.99327 | overlap 2219067 2219083 CAGTCATCAAAAACA GGCCGC AAAAGTCA GCGGCC AGTTCCAGACGGGCA TERM 2753 2219150 - 2219168 + g 89 -13.1 -3.36823 | overlap 2219162 TTTCCAGCTCATTCA CCGCCGC AGCCA GCGGCGG TTCGCTTTTCAGCAA TERM 2754 2221077 - 2221087 + r 77 -6.8 -4.46615 | overlap 2221068 TCAATTTCACCGGCG GCGA CTT TCGC TTTTAGTTGCTCGTA TERM 2755 2221490 - 2221479 - R 72 -5.8 -4.38712 | CTCACGCGCACAAAA CGGT TATC ACCG CGCTGGGAGGTATCG torC 2223058 - 2221886 - | trimethylamine N-oxide reductase, cytochrome c-type subunit torR 2223178 - 2223870 + | DNA-binding transcriptional regulator TorR torT 2224832 - 2223843 - | periplasmic sensory protein associated with the TorRS two-component regulatory system TERM 2756 2223983 - 2223956 - G 72 -5.6 -4.48987 | gap 1 GCGTCAGAACTAAAA TCGGTGGGCTGAC ATT ATCAGAC-ACCGA TTGCCCCTGTAATTG TERM 2757 2224210 - 2224240 + g 72 -8.2 -3.7456 | ATTTCTGGGTGGCGT TCCAGCATCTCCTG CAA CAGGTTACGCTGGA TTTCAATATCGTTAT TERM 2758 2224707 - 2224685 - G 72 -7.6 -3.86346 | opp_overlap 2224686, overlap 2224686 TCAGGCTGGGATAAA GCGCGCACAG TTT CCATGCGCGT TTGGCTTTAAGCGGC TERM 2759 2224706 - 2224686 - G 71 -11.1 -2.91593 | opp_overlap 2224686, overlap 2224685 CAGGCTGGGATAAAG CGCGCACAG TTT CCATGCGCG TTTGGCTTTAAGCGG TERM 2760 2226260 - 2226232 - g 83 -5.9 -4.98255 | overlap 2226248 GCGGAAGCAGAAAAA GCCAGCCAGGC AAAATCG GCCTTTCTGGC GGCGATGAGCCATGA TERM 2761 2227229 - 2227217 - g 76 -9.1 -3.76402 | ATGTCATTGACGAAA CGCTG CGC CAGCG TACCAGTTCATTATT torS 2224915 - 2227659 + | hybrid sensory histidine kinase TorS TERM 2762 2227768 - 2227747 - f 86 -2.9 -5.71712 | gap 1, overlap 2227750 2227751 TGGCAGAGAAAAAAA GAAC-CCGCT GGC AGCGGCGGCC AGGCACGACGGGCGG TERM 2763 2227764 - 2227750 - f 80 -5.6 -4.92669 | overlap 2227747 2227751 CAGAGAAAAAAAGAA CCCGCT GGC AGCGGC GGCCAGGCACGACGG TERM 2764 2227763 - 2227751 - f 72 -9.1 -3.53161 | overlap 2227750 2227747 AGAGAAAAAAAGAAC CCGCT GGC AGCGG CGGCCAGGCACGACG yccM 2228030 - 2228803 + | hypothetical protein sfa 2229245 - 2229015 - | cold shock gene TERM 2765 2229214 - 2229198 - G 100 -9.4 -5.4251 | opp_overlap 2229195 2229198 GGCAGATATAAAAAA GGCTCC ACGAG GGAGCC TGATATTATTTTGTG cspG 2229631 - 2229419 - | cold shock protein CspG cspH 2229917 - 2230129 + | cold shock-like protein ymcD 2230553 - 2230876 + | hypothetical protein ymcC 2230983 - 2231627 + | putative regulator ymcB 2231624 - 2232370 + | hypothetical protein ymcA 2232370 - 2234466 + | hypothetical protein TERM 2766 2234620 - 2234572 - g 73 -11.3 -2.62184 | opp_overlap 2234576 CTGTCTTTGACAGCA TG-TACCCTTGTTCCTGGTCAGA ATTTA TC-GACCAGGAACAAGGATGTCA TTGAACTACCTGACA TERM 2767 2234576 - 2234615 + G 90 -14.5 -2.91274 | gap 1, opp_overlap 2234572 CTTTGACAGCATGTA CCCTTGTTCCTGGTCAGA ATTTA TC-GACCAGGAACAAGGA TGTCATTGAACTACC yccZ 2234512 - 2235651 + | putative function in exopolysaccharide production TERM 2768 2235693 - 2235712 + G 72 -11.4 -2.50816 | overlap 2235692 ACCGGCAACATTTGC CGTTCGCC CATT GGCGAGCG CTTGCTGCGTAAACG TERM 2769 2235998 - 2235984 - g 70 -6.4 -4.1891 | opp_overlap 2235984, overlap 2235980 TGGCTGGAACAGAAA GAGATC CCG GATCCC TATCGTAAAAGTCAG etp 2235639 - 2236085 + | phosphotyrosine-protein phosphatase TERM 2770 2236524 - 2236501 - g 91 -5.2 -5.38326 | TTAACCAAAGAAAAA CCAGGTGAGC TGGC GATCAGCTGG ATGCATATTCCACAA TERM 2771 2237160 - 2237146 - g 72 -5.6 -4.56597 | overlap 2237148 GCGCTGCTGGAAAAA CGCCAG ACG CTGGAG CAAGAACGCAAACGC yccC 2236105 - 2238285 + | cryptic autophosphorylating protein tyrosine kinase Etk TERM 2772 2238306 - 2238317 + T 71 -7.2 -4.16943 | opp_overlap 2238294 AAAGTGGCCGGATGC GGCG TGAA CGCC TTTTCCGGTCTACGC TERM 2773 2238365 - 2238388 + T 100 -14 -5.31456 | opp_overlap 2238370 TTGTCATCAGCCTCA GAGCATTCAG GTAA CTGAATGCTC TTTTTTATGCATTAC appA 2239698 - 2238400 - | phosphoanhydride phosphorylase TERM 2774 2239231 - 2239244 + g 72 -4.5 -4.59853 | overlap 2239232 GTTCGCATTATCCAG TTGGC AAAC GCCAG TTTTTAGAGGATTAA TERM 2775 2239330 - 2239344 + g 77 -10 -3.65542 | overlap 2239329 AGGTGCCAGCCCGGC GGCGAA GGC TTCGCC TGTTTTACGGGTACG TERM 2776 2239393 - 2239408 + g 79 -4.6 -5.00884 | opp_overlap 2239381 2239380, overlap 2239394 AATCGCGACCTGACC AGGCTG CGGA CAGCCC TTTTTTGCCAGCAAT TERM 2777 2239736 - 2239769 + r 81 -13.1 -2.60988 | overlap 2239733 2239732 TCTGACATTATTGAT TGCCTGATGCGATGC TAAT GCGCCGCATCAGGCC TACGTTCGTTAACTT yccB 2239870 - 2239778 - | hypothetical protein appB 2241019 - 2239883 - | third cytochrome oxidase, subunit II TERM 2778 2240165 - 2240150 - G 73 -4 -4.7373 | gap 1, overlap 2240152 TGACGCCATTAAAAA TC-CCCA ACC TGGGCGA CCACGATAAATCGCC appC 2242575 - 2241031 - | third cytochrome oxidase, subunit I TERM 2779 2241659 - 2241669 + g 77 -8.2 -4.0942 | ATCAAATTCTTCAGA CCCG GCA CGGG TTTATCTAATGAGTG TERM 2780 2242072 - 2242051 - G 78 -10.9 -3.54424 | opp_overlap 2242053 GCTGACCGGGTTAAA GACCAGCTC GCTG AAGCTGGTC ATCTCCATACGTAGG TERM 2781 2242138 - 2242103 - G 70 -5.4 -4.34402 | gap 1, opp_overlap 2242103 GTGTCGATATCAAAA TGCGCACCGGTCGGGTA TTG CATCCAACCGTTG-GCA TTCAATATCCACAAT hyaF 2243566 - 2242709 - | HyaF TERM 2782 2242988 - 2242966 - G 83 -6.2 -4.9792 | opp_overlap 2242967, overlap 2242967 GACGTGAGAGAAAAA GCCGATCAGC CTC GCTGATGGGT AATTGCGTCAGATTA TERM 2783 2242987 - 2242967 - G 77 -9.7 -3.58029 | opp_overlap 2242967, overlap 2242966 ACGTGAGAGAAAAAG CCGATCAGC CTC GCTGATGGG TAATTGCGTCAGATT hyaE 2243961 - 2243563 - | hydrogenase-1 operon protein HyaE hyaD 2244545 - 2243958 - | hydrogenase 1 maturation protease hyaC 2245249 - 2244542 - | hydrogenase 1 b-type cytochrome subunit hyaB 2247061 - 2245268 - | hydrogenase 1 large subunit TERM 2784 2245850 - 2245864 + g 88 -11.4 -3.72893 | TTCCATCGCGTTACC GCGCCA GCG TGGCGC TTTGATCCACGAGTA TERM 2785 2246873 - 2246852 - G 72 -10.1 -3.35371 | gap 1, opp_overlap 2246863 2246868, overlap 2246841 GATACGTTCAACGAA CG-CCCACGC ATC GCGCGGGTCG CGCCCTTGTAGGATG hyaA 2248176 - 2247058 - | hydrogenase 1 small subunit TERM 2786 2248727 - 2248695 - H 77 -9.2 -3.90744 | opp_overlap 2248700, overlap 2248700 GCTTCCGCCAAATAA GATAAGGGGTTAGC TAAAT GCTAACCCCTTTTT CTTTTGCCTGTCGAA TERM 2787 2248722 - 2248700 - H 95 -13.5 -3.90464 | opp_overlap 2248700, overlap 2248695 CGCCAAATAAGATAA GGGGTTAGC TAAAT GCTAACCCC TTTTTCTTTTGCCTG TERM 2788 2248700 - 2248722 + H 100 -13.5 -5.48213 | opp_overlap 2248700 2248695 CGCCAAATAAGATAA GGGGTTAGC TAAAT GCTAACCCC TTTTTCTTTTGCCTG TERM 2789 2249114 - 2249101 - g 70 -5.2 -4.42386 | TCCTGACCTATAAAA CGGC GAATAA GCCG ACCGGGATTATCTCC yccA 2248896 - 2249555 + | hypothetical protein TERM 2790 2249575 - 2249601 + F 100 -10.1 -5.46657 | ACCCGCTAACACTTT CATAGCCTCGC TTTAT GCGGGGCTTTG TTTTTTGTTACACTG TERM 2791 2249911 - 2249880 - g 91 -8 -5.06414 | opp_overlap 2249885 TTTGGCGAAGAAAAA GGTAACAGCCGCTA TTTA TACCGACTGTTTCC GAAAGGTCCGGCTAA yccK 2249646 - 2249975 + | sulfurtransferase TusE SBO_2263 2250250 - 2249972 - | hypothetical protein TERM 2792 2251420 - 2251399 - g 72 -5.9 -4.40358 | gap 1, opp_overlap 2251402, overlap 2251402 ATTTATTTCAGAAAA TC-ATCGCGG ATG CCGCAATTGA TGCCGGCCGTGATGT SBO_2264 2250432 - 2251535 + | putative oxidoreductase yccV 2251542 - 2251910 + | hypothetical protein TERM 2793 2251950 - 2251923 - T 100 -17.1 -3.34344 | opp_overlap 2251923 TGATCCCTGAACGAA TCCCCGGAAGG TTTTTG CCTTCCGGGGA TTTTTTATTTGGCCA TERM 2794 2251923 - 2251950 + T 100 -17.8 -5.63517 | opp_overlap 2251923 TGATCCCTGAACGAA TCCCCGGAAGGT TTTT GCCTTCCGGGGA TTTTTTATTTGGCCA SBO_2266 2252449 - 2251955 - | hypothetical protein TERM 2795 2252190 - 2252208 + g 77 -8.8 -4.08064 | GCCAGCGTGCCATAC CCCTGCTG GCC CAGCAGCG TTTTGCCGGCAACTT SBO_2267 2252541 - 2253203 + | hypothetical protein TERM 2796 2253213 - 2253226 + F 88 -8.1 -4.7889 | overlap 2253209 TCCTGAGATTTTTGT GCCTG TGCG CAGGC TTTTTCGGTCTTTAT mgsA 2253299 - 2253757 + | methylglyoxal synthase TERM 2797 2253765 - 2253784 + T 100 -13.6 -4.24711 | opp_overlap 2253761 2253758 TGAAGTAATATTGCA CAGGTGGC AAAC GCCACCTG TTTCTTACGGTTTTC helD 2255843 - 2253789 - | DNA helicase IV TERM 2798 2256045 - 2256059 + G 75 -5 -4.74103 | TGTTGGCGACTCTGG TCAGTA TTG TGCTGA TTTTTACCTTACCGC TERM 2799 2256380 - 2256368 - g 71 -9.1 -3.52906 | overlap 2256366 GTATCGGTAGAAACA GCGCA AGC TGCGC GTGAAGCCAATGCAC yccF 2255966 - 2256412 + | hypothetical protein TERM 2800 2257277 - 2257302 + G 74 -8.3 -3.95554 | gap 1, overlap 2257280 ATGTCGATGCAGGGC CAGGCGTGCCAG CAA CTGTCACGC-TG TATTTTGTTGCGTCA TERM 2801 2257280 - 2257300 + G 78 -11.1 -3.55864 | overlap 2257277 TCGATGCAGGGCCAG GCGTGCCAG CAA CTGTCACGC TGTATTTTGTTGCGT TERM 2802 2257687 - 2257698 + G 72 -4.4 -4.62441 | TCACGGGTTTTGGAT CTTG CTGA CAAG TTTGTTTGTCTGCCA TERM 2803 2257829 - 2257855 + G 77 -2.9 -5.16572 | gap 1, overlap 2257822 2257823 2257822 2257831 2257833 CTGGAAGGGCAGCTG GTGC-TGCTGGT TATT ACCGGCGTGCTC TTTTTTGCCTTCCGT SBO_2271 2256422 - 2258584 + | hypothetical protein SBO_2272 2259176 - 2258547 - | hypothetical protein sulA 2259395 - 2259904 + | SOS cell division inhibitor TERM 2804 2259993 - 2260005 + F 100 -4.7 -6.02914 | overlap 2259994 CGAAGGCTTGTCTGA AGCGG TTT CCGCG TTTTTTTTCTGTAAA TERM 2805 2259994 - 2260004 + F 79 -8.2 -4.20122 | overlap 2259993 GAAGGCTTGTCTGAA GCGG TTT CCGC GTTTTTTTTCTGTAA ompA 2260261 - 2261307 + | outer membrane protein A TERM 2806 2261318 - 2261354 + T 95 -13.2 -3.794 | gap 1, opp_overlap 2261328, overlap 2261328 CTTAAGTTATCGTCT GGT-AGAAAAACCCCGC TGCT GCGGGGTTTTTTTTGCC TTTAGTAAATTGAAC TERM 2807 2261328 - 2261343 + T 100 -11.8 -5.89947 | opp_overlap 2261328, overlap 2261318 CGTCTGGTAGAAAAA CCCCGC TGCT GCGGGG TTTTTTTTGCCTTTA TERM 2808 2261343 - 2261328 - T 100 -11.8 -4.82901 | opp_overlap 2261328 2261318 CGTCTGGTAGAAAAA CCCCGC TGCT GCGGGG TTTTTTTTGCCTTTA ycbG 2261837 - 2261433 - | hypothetical protein SBO_2276 2262022 - 2263782 + | putative ATP-dependent protease fabA 2263851 - 2264369 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 2809 2264424 - 2264394 - T 79 -8.2 -4.34345 | opp_overlap 2264397 2264401, overlap 2264396 2264401 GACAGAGTATCAAAA GGCGAAACCTCCGC AAT GCGGAGGTTTCTTT TTAAAGAGACAGAAT TERM 2810 2264422 - 2264396 - T 90 -15.2 -2.51207 | opp_overlap 2264397 2264401, overlap 2264394 2264401 CAGAGTATCAAAAGG CGAAACCTCCGC AAT GCGGAGGTTTCT TTTTAAAGAGACAGA TERM 2811 2264397 - 2264421 + T 100 -18.7 -4.56597 | opp_overlap 2264396 2264394 2264401, overlap 2264401 AGAGTATCAAAAGGC GAAACCTCCGC AAT GCGGAGGTTTC TTTTTAAAGAGACAG TERM 2812 2264417 - 2264401 - T 100 -13.7 -3.77484 | opp_overlap 2264397 2264401, overlap 2264396 2264394 TATCAAAAGGCGAAA CCTCCGC AAT GCGGAGG TTTCTTTTTAAAGAG TERM 2813 2264401 - 2264417 + T 100 -13.7 -4.85782 | opp_overlap 2264401 2264396 2264394, overlap 2264397 TATCAAAAGGCGAAA CCTCCGC AAT GCGGAGG TTTCTTTTTAAAGAG rmf 2264606 - 2264439 - | ribosome modulation factor TERM 2814 2264673 - 2264647 - R 72 -3 -5.07652 | overlap 2264649 2264661 TGGTGGAAAAGAAAA CAGTGATTAC TAAATGT GCAATCACAG TTAAGCAATACCGCG TERM 2815 2264839 - 2264813 - R 100 -10.8 -6.02919 | opp_overlap 2264813 TTAGAAACAAAAAAA CCGCCTCAGGCA ACA TACCGGAGACGG TTATACTTACAAATC ymbA 2265410 - 2264862 - | hypothetical protein pqiB 2267062 - 2265422 - | paraquat-inducible protein B TERM 2816 2266272 - 2266258 - G 70 -4.3 -4.58424 | GATCATCATACAAAA CGAAA GCTGT TTTCG GTGCCACTGGCTGCC pqiA 2268320 - 2267067 - | paraquat-inducible protein A TERM 2817 2267820 - 2267788 - G 71 -3.3 -4.84146 | overlap 2267793 AGGACACAAAATAAA CACCAGGGGAGAAAG CTG CTGCCTACCCCAATG CTGCCGTAAGCCATC TERM 2818 2267922 - 2267906 - G 72 -4.3 -4.62069 | opp_overlap 2267906 TTTTGAGTTGAAAAA GCACCCG TGC CAGTTGC TCTTTTAAACGGACC TERM 2819 2268376 - 2268404 + r 83 -8.9 -4.21936 | overlap 2268377 AAAGTGTTGGTTTTC ATGCCTGATAAAC CCA GTTCATCAGGCAA TTTTACCGTTGTCAG TERM 2820 2268377 - 2268403 + r 81 -12.4 -3.1268 | overlap 2268376 AAGTGTTGGTTTTCA TGCCTGATAAAC CCA GTTCATCAGGCA ATTTTACCGTTGTCA uup 2270357 - 2268450 - | ABC transporter ATPase component TERM 2821 2268709 - 2268719 + g 74 -8.2 -3.88925 | ACAGTTTCTGCTTTT GCCG CGG CGGC TTCTTCGGTTTTTTT ycbY 2272477 - 2270369 - | 23S rRNA m(2)G2445 methyltransferase TERM 2822 2270995 - 2271011 + g 70 -3.7 -4.6902 | ACTCGCCCTTCTCGC CCAGT TTCTGGT ACTGG TTTTTGCCCTTCTGG TERM 2823 2273240 - 2273223 - g 75 -5.5 -4.62069 | opp_overlap 2273236 2273236 CGGCCAGTGTAAAAA TGGAGCA ATTC CGCCCCA ATCTGGTGGTTTCCG SBO_2284 2272721 - 2273830 + | hypothetical protein ycbW 2274405 - 2273827 - | hypothetical protein TERM 2824 2274095 - 2274080 - G 71 -2.5 -4.88918 | CCATGGGAAACAAAA TGCCA GCTTTT CGGCA TTTGCGGTTTGAGAT TERM 2825 2274521 - 2274478 - R 74 -10.6 -3.22448 | opp_overlap 2274488 2274489 2274491, overlap 2274485 2274489 AGCAACAGCGATGAA TATAAAACAACCAGGGCT GAAAATAA AGCCCTGATTATCTTATA AAGAGGAATTCGAAG TERM 2826 2274514 - 2274485 - R 78 -6.5 -4.70583 | opp_overlap 2274488 2274489 2274491, overlap 2274478 2274489 GCGATGAATATAAAA CAACCAGGGCT GAAAATAA AGCCCTGATTA TCTTATAAAGAGGAA pyrD 2275553 - 2274543 - | dihydroorotate dehydrogenase 2 TERM 2827 2274711 - 2274730 + g 70 -4.2 -4.65895 | overlap 2274715 TAATTCCAGTGACAA GCGGCGAA TAAT TTCGGTGC TTTTTAACTGAAGCG TERM 2828 2274941 - 2274954 + g 72 -5.3 -4.47707 | TATGGTGCATCGCTT GCAAA TCAT TTTGC TTATTTTTAATCGCG TERM 2829 2275655 - 2275641 - R 86 -2.8 -5.75342 | CTGCGGCAAAAAAAA CGCAAA CGT TTTCCG AACCTGTTTCAGGGC ycbF 2276401 - 2275664 - | hypothetical protein insB 2276950 - 2276447 - | IS1 ORF2 ais 2277847 - 2277173 - | protein induced by aluminum SBO_2290 2278098 - 2279237 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase SBO_2291 2279241 - 2280209 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2830 2280431 - 2280443 + G 91 -7.7 -5.0432 | CGCATTGCCCAACTG TCACC AGA GGTGA TTTTCTCTTTTTATT TERM 2831 2281669 - 2281649 - g 70 -4 -4.59773 | GCCTATGGCGAAAAA GAGGGT TTACAGTTC ACCCTC TTCCGCCCGTTTAAC SBO_2292 2280209 - 2282191 + | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase SBO_2293 2282188 - 2283078 + | hypothetical protein TERM 2832 2283300 - 2283261 - g 75 -5.7 -4.59773 | opp_overlap 2283261 2283259 2283262 2283299, overlap 2283262 CGTTATTTCGAAAAA CCCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGGC TATTTGGCGCGAATA TERM 2833 2284110 - 2284088 - g 81 -4.8 -5.14563 | opp_overlap 2284091 GCTGGCAGCAAAAAA TAATCCTCTG GCG CTGCGGATTA ATGGCTGGATTAACA TERM 2834 2284308 - 2284283 - g 72 -6.9 -4.19678 | gap 1 GTACACCTTAACAAA CGTCGAAAAGAC CTG GTCTTT-CGCCG CGCTTTGCCCGCTGG arnT 2283078 - 2284730 + | 4-amino-4-deoxy-L-arabinose transferase TERM 2835 2284930 - 2284910 - f 73 -11.1 -2.59431 | opp_overlap 2284909 2284906, overlap 2284906 GTCTTGCAGAACGTA CCGGTAGGC ATT GCCTACCCG ATGTTAAGTCTGAAT TERM 2836 2284995 - 2285020 + F 72 -8.9 -3.56142 | opp_overlap 2284988 GGCACGAACCGGTAT CGCCGCGTCAC TGGT GTGGGGTGGCG TTCATTATTGGTGGC SBO_2295 2285062 - 2285448 + | hypothetical protein pmrD 2285738 - 2285442 - | polymyxin resistance protein B menE 2287173 - 2285818 - | O-succinylbenzoic acid--CoA ligase TERM 2837 2287057 - 2287092 + g 70 -9.7 -3.25015 | gap 1, opp_overlap 2287045 2287057 AAAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG TERM 2838 2287092 - 2287057 - G 75 -11.9 -3.06312 | gap 1, opp_overlap 2287057, overlap 2287045 AAAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG menC 2288132 - 2287170 - | O-succinylbenzoate synthase TERM 2839 2287532 - 2287549 + g 81 -9.1 -4.09511 | opp_overlap 2287531 TTTCACGGGCAAACG CTCGCGA ATCA TCGCGGG TTTTGCACGGCTCTT TERM 2840 2288046 - 2288056 + g 85 -8.2 -4.57837 | opp_overlap 2288043 CAGGCAAACGTACAG CCCG TCG CGGG TTTTTAACCGCCTGT menB 2288989 - 2288132 - | naphthoate synthase TERM 2841 2288429 - 2288452 + g 82 -2.3 -5.36441 | CGCGTCGTACTGACG GCACAGGAA CCAGAT TTCCCGCGC TTTTTTCTGTCCGAC TERM 2842 2289034 - 2289011 - R 84 -10.4 -3.91897 | gap 1, opp_overlap 2289024 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATTACGCCAGCGGGA yfbB 2289762 - 2289004 - | acyl-CoA thioester hydrolase YfbB TERM 2843 2289039 - 2289064 + g 74 -9.7 -3.48276 | gap 1, overlap 2289024 CCAGACTTGCGATTA CGC-CAGCGGGA TTT TCCCGATGCGCG TTATGTCCGGCGCGA TERM 2844 2289171 - 2289160 - G 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 2845 2289229 - 2289195 - G 70 -10.8 -2.80796 | gap 1, opp_overlap 2289228, overlap 2289194 2289197 2289215 2289216 GGTTAGCACGTAAAT CAGGCTGGACGGCGA GAGAAG TCGCC-TCCAGCATG GCGGCAAGGGTTGCG TERM 2846 2289478 - 2289456 - G 72 -7.6 -3.95051 | CAATAACCCCACAAA GCCCCGCCAG CCC CTGGCAAGCC GCCATCATCGCCACC TERM 2847 2289715 - 2289729 + g 75 -7.1 -4.35581 | opp_overlap 2289714, overlap 2289716 2289719 GTGCAAAAACACCAG CCAGG GTAAA CCTGG TTTTCCGTGTTTTGC menD 2291429 - 2289759 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 2848 2290789 - 2290799 + g 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CGC GCTG TTTTTCACTTTCCAG menF 2292813 - 2291518 - | isochorismate hydroxymutase 2 TERM 2849 2291952 - 2291971 + g 80 -5.6 -4.91109 | AGATATCTTCCACCA CCAGCATG TTCT CGCGCTGG TTTTTATCATCCGCC TERM 2850 2292878 - 2292848 - R 82 -13.4 -2.85847 | opp_overlap 2292836 AAGCCTCACATTATA CGGGGTACTACA AAAAAAA TGCAGTACCCCG GTGTAGGGAGGTTTT elaB 2293197 - 2292892 - | hypothetical protein TERM 2851 2292950 - 2292960 + g 75 -5.4 -4.72986 | GCGCCCACACCAATT CCTT GCC AAGG TTTTTCGTGGACGTA elaA 2293713 - 2293252 - | hypothetical protein elaC 2293778 - 2294695 + | ribonuclease Z insB 2295222 - 2294740 - | IS1 ORF2 SBO_2307 2295297 - 2295530 + | putative IS1 encoded protein TERM 2852 2295568 - 2295578 + F 80 -5.4 -4.94147 | GATAATTTATATATG GGAA AAA TTCC TTTTGTTATATTGTT TERM 2853 2295711 - 2295688 - f 83 -4 -5.38249 | gap 1 AGCAATTAGAAAAAA CAGTTCGT-TA TCT TACACAAACTG TGCATCCACGTAATG yfbM 2296307 - 2296651 + | hypothetical protein TERM 2854 2296818 - 2296846 + T 76 -11.8 -2.52896 | opp_overlap 2296823, overlap 2296823 TGTCAGAGCGCCAAA AAAAACCGCCGA ACATG TCGGCGGTTTTC TGACTTACAAACTAA TERM 2855 2296841 - 2296823 - T 100 -11.7 -5.76949 | opp_overlap 2296823 2296818 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG TTTTCTGACTTACAA TERM 2856 2296823 - 2296841 + T 100 -11.7 -4.4715 | opp_overlap 2296823, overlap 2296818 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG TTTTCTGACTTACAA nuoN 2298323 - 2296866 - | NADH dehydrogenase subunit N TERM 2857 2297505 - 2297493 - G 73 -9.1 -3.67296 | GATGATGGAGGCAAA GGCGA TAA TCGCC AGTACTACGCGAATC nuoM 2299859 - 2298330 - | NADH dehydrogenase subunit M TERM 2858 2299293 - 2299283 - G 74 -2.4 -5.10461 | overlap 2299287 TGTAGTGAACAAAAA CCAG CGC CAGG ATGGCAATCAACATC TERM 2859 2299651 - 2299639 - G 75 -6.9 -4.41956 | ATAGAGATACCAAAA CGCGG GAT CCACG GCATGTCGAATTCAG TERM 2860 2299943 - 2299985 + r 71 -7.7 -3.88232 | gap 1, overlap 2299944 TCTCTTCGGACTGGG GGTAGTGTCGGATGCGCCGC GAAG GCAGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 2861 2299944 - 2299984 + r 74 -11.2 -2.92618 | gap 1, overlap 2299943 CTCTTCGGACTGGGG GTAGTGTCGGATGCGCCGC GAAG GCAGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2301864 - 2300023 - | NADH dehydrogenase subunit L TERM 2862 2300519 - 2300537 + g 72 -4.6 -4.68601 | overlap 2300517 CTGTGAGTTACCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT nuoK 2302163 - 2301861 - | NADH dehydrogenase subunit K nuoJ 2302714 - 2302160 - | NADH dehydrogenase subunit J nuoI 2303268 - 2302726 - | NADH dehydrogenase subunit I nuoH 2304260 - 2303283 - | NADH dehydrogenase subunit H TERM 2863 2304103 - 2304083 - G 90 -14.7 -2.71364 | TCATGTCCGCAACCA GCTGGAGCG AAC CGCCCCAGC CAACACGGTTAGGTC nuoG 2306989 - 2304257 - | NADH dehydrogenase subunit G TERM 2864 2306220 - 2306231 + g 70 -5.8 -4.18018 | TAGTGGTTTACCGTA CCGT TGTA ACGG TTTTCGATACGACGC TERM 2865 2306875 - 2306856 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2308373 - 2307036 - | NADH dehydrogenase I subunit F TERM 2866 2307495 - 2307509 + g 88 -11.4 -3.84451 | GTCAGTCCCCGCGCC GCCTGG CTG CCAGGC TTTAAATTTCAGACC TERM 2867 2308296 - 2308310 + g 81 -10 -3.96148 | overlap 2308295 GCTGCGGTATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2308870 - 2308370 - | NADH dehydrogenase subunit E nuoC 2310675 - 2308873 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 2868 2310395 - 2310384 - G 72 -5.8 -4.41548 | opp_overlap 2310393, overlap 2310392 2310393 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 2869 2310416 - 2310392 - G 74 -3.3 -4.89729 | opp_overlap 2310393, overlap 2310384 2310393 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT nuoB 2311431 - 2310769 - | NADH dehydrogenase subunit B nuoA 2311890 - 2311447 - | NADH dehydrogenase subunit A TERM 2870 2311592 - 2311578 - G 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC TERM 2871 2312443 - 2312478 + r 100 -8.9 -5.09173 | opp_overlap 2312446, overlap 2312444 2312446 GATTTTTACTAAAAA AAAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTCG TTTTTTACACTATTG TERM 2872 2312444 - 2312477 + r 88 -12.4 -3.6442 | opp_overlap 2312446, overlap 2312443 2312446 ATTTTTACTAAAAAA AAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTC GTTTTTTACACTATT TERM 2873 2312475 - 2312446 - R 100 -15 -5.86061 | opp_overlap 2312444 2312443 2312446 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTTACACTA TERM 2874 2312446 - 2312475 + r 100 -15 -3.38726 | opp_overlap 2312446, overlap 2312444 2312443 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTTACACTA lrhA 2313459 - 2312521 - | NADH dehydrogenase transcriptional regulator TERM 2875 2312742 - 2312768 + g 77 -12.2 -2.78679 | overlap 2312741 GGCTCATCATCTCAA CCGGCCTTGCCG TCA CGCCAAGACCGG CTTTCACTGCCGCAC TERM 2876 2313209 - 2313183 - G 72 -11.1 -3.12482 | opp_overlap 2313190, overlap 2313187 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGGATTTTCC TERM 2877 2313229 - 2313212 - G 72 -6.3 -4.30576 | gap 1, overlap 2313214 GCCTCATCATTAAAA CG-CAGGA TTT TCCTGGCG TAACCAAGAAGTTGA TERM 2878 2314383 - 2314367 - H 76 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC SBO_2323 2314378 - 2315595 + | aminotransferase AlaT TERM 2879 2315983 - 2315973 - T 72 -3.2 -5.09225 | opp_overlap 2315973 AGGCTATTGAAAAAA TCGC TCA GCAA AAACTGGTCGATATG TERM 2880 2316186 - 2316159 - T 72 -4.8 -4.56597 | gap 1, overlap 2316161 2316174 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG TCGCAGCCAGGAGAT TERM 2881 2316206 - 2316220 + T 71 -7.2 -4.1673 | AGCCAGGAGATGGAC TACTTC ATG GAAGTA TTTGTTCCCAGCTTC TERM 2882 2316285 - 2316332 + T 81 -12.8 -3.28712 | gap 1, opp_overlap 2316310 CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA yfbS 2318168 - 2316336 - | putative transport protein TERM 2883 2318235 - 2318218 - R 100 -9.8 -5.24129 | overlap 2318230 TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATGAAC SBO_2326 2319175 - 2318288 - | IS629 ORF2 TERM 2884 2318855 - 2318867 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_2327 2319450 - 2319175 - | IS629 ORF1 yfbT 2320218 - 2319568 - | putative phosphatase SBO_2329 2320723 - 2320229 - | hypothetical protein TERM 2885 2320781 - 2320763 - R 100 -6 -6.07627 | opp_overlap 2320763 ACGGTGAAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 2886 2320763 - 2320781 + r 74 -6 -4.55689 | opp_overlap 2320763 ACGGTGAAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT SBO_2330 2321262 - 2320807 - | hypothetical protein ackA 2321600 - 2322802 + | acetate kinase TERM 2887 2322806 - 2322833 + F 100 -16.4 -4.36914 | gap 1, overlap 2322808 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 2888 2322808 - 2322830 + F 100 -19.2 -2.8733 | overlap 2322806 GACTGCCTGATTTCA CACCGCCAGC TCA GCTGGCGGTG CTGTTTTGTAACCCG TERM 2889 2323848 - 2323863 + G 78 -9 -3.96148 | overlap 2323852 CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2322877 - 2325021 + | phosphate acetyltransferase TERM 2890 2325033 - 2325053 + F 79 -12.6 -2.87132 | GTAATCTCGTCATCA TCCGCAGC TTTGC GCTGCGGA TATCTGAACCGGAAA TERM 2891 2325062 - 2325084 + F 100 -10.7 -5.64304 | CTGCGGATATCTGAA CCGGAAATA ATCAC TATTTCCGG TTTTTTATTCTCTTA TERM 2892 2326034 - 2326053 + G 74 -8.6 -3.87149 | overlap 2326006 TTCGTGAAAAGCAGG CGGATGTT GAAC AACGTCCG TTTACCTTTGGTGAC yfcC 2325211 - 2326731 + | hypothetical protein TERM 2893 2326741 - 2326758 + T 100 -12.7 -5.32944 | opp_overlap 2326736 2326743 CACTAAAAATGTTAA GAGCCGC AATT GCGGCTC TTTTTTCATTCTGCC TERM 2894 2326756 - 2326743 - T 71 -9.5 -3.17553 | opp_overlap 2326741, overlap 2326736 CTAAAAATGTTAAGA GCCGC AATT GCGGC TCTTTTTTCATTCTG SBO_2334 2327306 - 2326764 - | putative regulator TERM 2895 2326852 - 2326870 + g 82 -9.6 -4.16016 | opp_overlap 2326851 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA yfcE 2327918 - 2327364 - | phosphodiesterase yfcF 2328603 - 2327971 - | hypothetical protein TERM 2896 2328295 - 2328310 + g 86 -9 -4.42386 | CCAGGCCTGAATCTG TCGTGC ACGC GCACGA TTTTCTAAATCAAGC yfcG 2328739 - 2329386 + | putative S-transferase folX 2329443 - 2329805 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 2897 2330283 - 2330243 - g 93 -12.6 -3.93583 | gap 1, overlap 2330228 GAATTTACTCATAAA CTCTGCGCCC-GCTGGGAA GAGA TTGCCTGCCGGGCGCAAAG TGACAAAACGCGAGT SBO_2339 2329826 - 2330719 + | putative sugar nucleotide epimerase yfcI 2331309 - 2330767 - | hypothetical protein SBO_2341 2331493 - 2331323 - | putative IS1 encoded protein insB 2331586 - 2332089 + | IS1 ORF2 TERM 2898 2332410 - 2332398 - T 72 -9.1 -3.51168 | overlap 2332396 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 2899 2332625 - 2332599 - T 74 -7.3 -4.25848 | gap 1, overlap 2332601 AATTCCCCATGAAAA TACTCCGGCAGC GTTA GCCACCGGAG-A GGAAATTATTTCAGC TERM 2900 2332624 - 2332601 - T 93 -12.4 -3.73042 | overlap 2332599 TTCCCCATGAAAATA CTCCGGCAGC GTTA GCCACCGGAG AGGAAATTATTTCAG hisP 2333404 - 2332631 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2334128 - 2333412 - | histidine transport, membrane protein M TERM 2901 2333437 - 2333450 + g 72 -4.5 -4.64766 | opp_overlap 2333428, overlap 2333438 GAAGAAGGTTTCACA TGCTG CAAC CAGCG TTTTTCCGCTCTGCG hisQ 2334811 - 2334125 - | histidine transport system permease protein TERM 2902 2334847 - 2334881 + r 70 -4.9 -4.42062 | gap 1, overlap 2334848 TGGTGAATTACCGCC TCTTGTCTCCCTCCGG TTAC CCGAAGGGAG-CGGGC TTTCTTTCACCGATG hisJ 2335683 - 2334901 - | histidine-binding periplasmic protein of high-affinity histidine transport system TERM 2903 2335543 - 2335555 + g 84 -4.1 -5.27477 | ATCGAAGCCAACCAG TTCGC CTT GTGAA TTTTTTGATTCAAAT argT 2336686 - 2335904 - | lysine-, arginine-, ornithine-binding periplasmic protein TERM 2904 2336030 - 2336053 + g 100 -5.2 -5.63645 | ATCTTTACGTAGCCC TACACCGGTG CCAT CACCGAAGTA TTTTTTGTCTTTTAC TERM 2905 2336943 - 2336925 - R 95 -13.2 -4.07687 | overlap 2336936 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG ubiX 2337521 - 2336952 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2906 2337603 - 2337585 - R 78 -12.4 -2.53263 | GGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TCAGCGAAGGCATCA purF 2339133 - 2337616 - | amidophosphoribosyltransferase TERM 2907 2338035 - 2338048 + g 73 -3.7 -4.82901 | GGACGATGGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 2908 2338904 - 2338870 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TAGGGTAACGCACAT cvpA 2339658 - 2339170 - | colicin V production protein TERM 2909 2339786 - 2339761 - R 100 -9.8 -5.14163 | ACGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC dedD 2340579 - 2339917 - | hypothetical protein folC 2341837 - 2340569 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 2910 2341813 - 2341789 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 2911 2341896 - 2341874 - R 100 -17 -4.46656 | opp_overlap 2341874 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 2912 2341874 - 2341896 + r 93 -14.8 -3.45054 | opp_overlap 2341874 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2342821 - 2341907 - | acetyl-CoA carboxylase subunit beta TERM 2913 2342079 - 2342101 + g 74 -6.3 -4.56775 | gap 1, opp_overlap 2342079 TCGATCAGGAATTCA CTG-CGCTGG AATC CTAGCGGCAG TTTTTCGCGAACGGT TERM 2914 2342843 - 2342857 + r 71 -3.5 -4.78848 | CCTTTCTGTCTGAAC CTGGT TCGAT GCCAG TTTTATCTTTGGGGA TERM 2915 2342965 - 2342953 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC GGAGTTACTTTTTAT dedA 2343636 - 2342977 - | hypothetical protein TERM 2916 2343653 - 2343709 + r 80 -9.5 -3.90241 | overlap 2343664 2343704 TTTGCCTATGCCTTG TACTCGTCATCTTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAATGTTCCGAGCA TTATTCTCGTTAGTC TERM 2917 2343664 - 2343698 + r 93 -15.2 -3.03338 | overlap 2343653 CTTGTACTCGTCATC TTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCATTAT truA 2344531 - 2343719 - | tRNA pseudouridine synthase A TERM 2918 2344283 - 2344308 + g 100 -13.9 -3.92542 | ATTTACGCCCAAGGT CCACGCCGCGT CTTT GCGCGGCGCGG TTGTTTCGAAATGCA usg 2345544 - 2344531 - | putative semialdehyde dehydrogenase TERM 2919 2345597 - 2345570 - R 73 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATGTTA CAGCAGAGAGC ATGAAGAAGAGATTA pdxB 2346746 - 2345610 - | erythronate-4-phosphate dehyrogenase div 2346845 - 2347840 + | flagella biosynthesis regulator SBO_2359 2349015 - 2347837 - | hypothetical protein TERM 2920 2348962 - 2348946 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGCGA TGCGG AAGAGCGAAAAATTG TERM 2921 2349176 - 2349207 + r 81 -12.4 -3.14132 | opp_overlap 2349183, overlap 2349183 CGATTGTCAATGATG TGAAAAAGGGAACC ATCA GGTTCCCTTTTGCG TTAGTGCCGGAGGCC TERM 2922 2349183 - 2349200 + r 91 -11.3 -4.30014 | opp_overlap 2349183, overlap 2349176 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC TERM 2923 2349200 - 2349183 - R 95 -11.3 -4.64598 | opp_overlap 2349183 2349176 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC fabB 2350555 - 2349335 - | 3-oxoacyl-(acyl carrier protein) synthase I mnmC 2350714 - 2352720 + | 5-methylaminomethyl-2-thiouridine methyltransferase SBO_2362 2353119 - 2352841 - | hypothetical protein SBO_2363 2353701 - 2353153 - | putative transporting ATPase yfcA 2354510 - 2353701 - | hypothetical protein TERM 2924 2354068 - 2354053 - G 75 -4.6 -4.84017 | AATCCGTCATAAAAA CCGACG CAGC CACCGG CAATTAACGCGAAGG mepA 2355334 - 2354510 - | penicillin-insensitive murein endopeptidase TERM 2925 2355240 - 2355255 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 2926 2355280 - 2355324 + g 80 -5.5 -4.95211 | opp_overlap 2355288 GCCACGGCGTCGCTG CCAAGCTAGCGCTACTGGC AAGCAGA GCCAGCAGCGCAATCGCGG TTTTGTTCATTTTTT TERM 2927 2355316 - 2355288 - G 84 -13.9 -2.52464 | opp_overlap 2355280 GTCGCTGCCAAGCTA GCGCTACTGGC AAGCAGA GCCAGCAGCGC AATCGCGGTTTTGTT aroC 2356423 - 2355338 - | chorismate synthase TERM 2928 2355980 - 2355994 + g 77 -2.8 -5.03314 | opp_overlap 2355980, overlap 2355982 GATTTCAATACCAAA TTTCTC GGC GAGATA TTTTTTGGCAATCGC yfcB 2357723 - 2356458 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase SBO_2367 2357556 - 2358107 + | hypothetical protein SBO_2369 2358944 - 2358180 - | hypothetical protein TERM 2929 2358484 - 2358498 + g 72 -5.8 -4.4078 | AACCTGACGACTTTG TTATGT ACA ACATAA TTTTCATTCCAGGAA TERM 2930 2358538 - 2358522 - G 87 -13.7 -2.98479 | overlap 2358517 2358515 CCAGGAAACATCATA CGGTGCC AGG GGCACCG CCGGACATGAAGAAC SBO_2370 2359008 - 2359373 + | insertion sequence 2 OrfA protein SBO_2371 2359331 - 2360236 + | insertion element IS2 transposase InsD SBO_2372 2360911 - 2360444 - | putative fimbrial-like protein SBO_2373 2361396 - 2360908 - | hypothetical protein SBO_2374 2361902 - 2361393 - | putative fimbrial protein yfcS 2362670 - 2361918 - | putative chaperone TERM 2931 2362093 - 2362106 + g 95 -9.5 -5.03314 | overlap 2362092 GGTGTGAATCCCGCC GGCGG GTTG CCGCC TTTTTTAGCGCTGGC yfcU 2365332 - 2362690 - | PapC-like porin protein TERM 2932 2363791 - 2363763 - G 70 -7.3 -4.05747 | opp_overlap 2363763 2363769, overlap 2363772 TATAGTTGAGATAAA CCGAAACACCCGC ATC GCGGAAGTTCTGG TTATAAGTGGCGGTG TERM 2933 2364563 - 2364573 + g 75 -6.8 -4.32034 | TAATCCTCGCCCAGC GCCA GTT TGGC TTTTAATGATGGTAA TERM 2934 2365104 - 2365116 + g 70 -4.7 -4.56702 | AAATATCGTACTCTT CCGCC AAT GGCTG TTTATTTAGTTGAAC TERM 2935 2365408 - 2365381 - R 93 -12 -3.71148 | opp_overlap 2365381, overlap 2365382 CAAAATCCATTTAAA TCCCCCATAGCA GTGT CGCTATGGGGGT ATGCCTTACAGGTAA TERM 2936 2365407 - 2365382 - R 93 -15.5 -2.81966 | opp_overlap 2365381, overlap 2365381 AAAATCCATTTAAAT CCCCCATAGCA GTGT CGCTATGGGGG TATGCCTTACAGGTA TERM 2937 2365902 - 2365958 + r 79 -8.8 -4.09739 | overlap 2365890 TACCGTTGTTACCCG CAGCGATTGTTGCCGTAGAGGTGA ACACGCCCA TCACCATTGCCGCAGCAATAGCTG TTTTAACAAACTTAC TERM 2938 2366640 - 2366608 - R 90 -14.4 -3.21099 | opp_overlap 2366608 CTGCCTGATGAGCAA TTATGCCCAATGAA TCTAC CTCATTGGGCATAA TTTGGAACACATCAG TERM 2939 2366608 - 2366640 + r 93 -13.7 -3.53811 | opp_overlap 2366608 CTGCCTGATGAGCAA TTATGCCCAATGA ATCTACC TCATTGGGCATAA TTTGGAACACATCAG SBO_2378 2367137 - 2366652 - | phosphohistidine phosphatase fadJ 2369484 - 2367340 - | multifunctional fatty acid oxidation complex subunit alpha TERM 2940 2367687 - 2367699 + g 88 -2.6 -5.46698 | TGAGCGGGTAAATGG CGGG ATCGA CCTG TTTTTTGCTTTTACG TERM 2941 2368033 - 2368045 + g 70 -6.9 -4.13963 | opp_overlap 2368033 2368032, overlap 2368022 GTCACGCACGACAAT GGGCG TTT TGCCC TGTTTTTTCGCCAGT fadI 2370794 - 2369484 - | 3-ketoacyl-CoA thiolase TERM 2942 2370956 - 2370930 - R 100 -20.2 -5.3689 | AGAAAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG AACGTACCCGAGAGG SBO_2381 2371282 - 2370974 - | hypothetical protein fadL 2371624 - 2372970 + | long-chain fatty acid outer membrane transporter TERM 2943 2373012 - 2372992 - f 100 -15.5 -3.85698 | opp_overlap 2372992 GTTCGCCTGGATAAA GTCACCTGC ATA GCAGGTGAC TTTAACTCCCCCACT TERM 2944 2372992 - 2373012 + F 100 -15.5 -3.64822 | opp_overlap 2372992 GTTCGCCTGGATAAA GTCACCTGC ATA GCAGGTGAC TTTAACTCCCCCACT TERM 2945 2373598 - 2373573 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 2373581, overlap 2373574 2373588 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 2946 2374578 - 2374606 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SBO_2383 2373435 - 2374631 + | ISSfl2 ORF insB 2375682 - 2375506 - | IS1 ORF2 SBO_2385 2376562 - 2375657 - | insertion element IS2 transposase InsD SBO_2386 2376885 - 2376520 - | insertion sequence 2 OrfA protein insB 2377345 - 2376974 - | IS1 ORF2 TERM 2947 2378132 - 2378093 - R 77 -10.3 -3.3785 | opp_overlap 2378103 2378131, overlap 2378103 GTAATTGAGGGATAA CAACAAAAAAGGTGAGT TTTGCG ACTCACCTTTTTTATTT GTTTCTTATTCAGAA TERM 2948 2378122 - 2378103 - R 100 -7.9 -5.68489 | opp_overlap 2378103, overlap 2378093 GATAACAACAAAAAA GGTGAGT TTTGCG ACTCACC TTTTTTATTTGTTTC TERM 2949 2378103 - 2378122 + r 100 -8.6 -5.85425 | opp_overlap 2378103 2378093 GATAACAACAAAAAA GGTGAGTT TTGC GACTCACC TTTTTTATTTGTTTC vacJ 2378893 - 2378138 - | lipoprotein precursor TERM 2950 2379587 - 2379568 - g 70 -4.2 -4.65895 | opp_overlap 2379568 CCCGTCATGCAAAAA CCGACAAT GAGC AACGTCGG CTTACTTATGCGATT yfdC 2379187 - 2380119 + | putative transport TERM 2951 2380417 - 2380395 - T 93 -10 -4.60487 | CATGACGGGTAAAAA GTGGATAAAA TAA TTTTACCCAC CGGATTTTTACCCAT SBO_2391 2381197 - 2380676 - | IS911 ORF2 TERM 2952 2381084 - 2381095 + g 77 -5.8 -4.63218 | opp_overlap 2381080 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG dsdA 2381236 - 2382462 + | D-serine dehydratase emrY 2384108 - 2382570 - | multidrug resistance protein Y TERM 2953 2383679 - 2383690 + g 79 -2.2 -5.24531 | opp_overlap 2383675 TTGACCATAATGCCA GAGC AAAT GTTC TTTTTTCTGGCGGAT emrK 2385271 - 2384108 - | multidrug resistance protein K TERM 2954 2384763 - 2384779 + g 93 -12.3 -3.89131 | TTATAAGCCTGGATA GCGGCAT TCA ATGCCGC TTTGCTACTTATTAA TERM 2955 2384893 - 2384920 + g 83 -10 -4.1337 | gap 1, opp_overlap 2384893, overlap 2384896 ATTGTTGATACTGAA TAC-GTGCTGAAG CGA CTTCGGCACTGTA TTGTTTATCCTGTAA TERM 2956 2384896 - 2384916 + g 80 -11.9 -3.39301 | opp_overlap 2384893, overlap 2384893 GTTGATACTGAATAC GTGCTGAAG CGA CTTCGGCAC TGTATTGTTTATCCT evgA 2385687 - 2386301 + | DNA-binding transcriptional activator EvgA TERM 2957 2386605 - 2386580 - g 75 -5.5 -4.60924 | overlap 2386569 TAAATCTTTTAAAAA GAGCGTTAAAT ATCA AATTAACACTC CGGGAATACGCCGAT TERM 2958 2387543 - 2387524 - g 100 -4.3 -5.66989 | opp_overlap 2387524 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC ATATTATTATGAGCT TERM 2959 2388437 - 2388418 - g 70 -3.6 -4.65722 | gap 1, overlap 2388426 GTAGAGAGAAATAAA GCGATCAAT GCA ACTG-TCGC AAAAAGTCAGTTTCT evgS 2386306 - 2389899 + | hybrid sensory histidine kinase in two-component regulatory system with EvgA TERM 2960 2389906 - 2389932 + T 79 -10.9 -3.34517 | opp_overlap 2389903 2389904, overlap 2389904 AATGACTAAATAGCG GCTCCCACAAT GTTCA AATGTGGGAGC TATTTACCAGCACAT yfdE 2391139 - 2389955 - | hypothetical protein TERM 2961 2390028 - 2390043 + g 75 -4.6 -4.87786 | opp_overlap 2390022, overlap 2389999 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 2962 2391145 - 2391121 - G 83 -6.5 -5.0133 | gap 1, opp_overlap 2391121 2391120 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA SBO_2398 2392118 - 2391174 - | putative transporter YfdV SBO_2399 2393882 - 2392188 - | putative oxalyl-CoA decarboxylase TERM 2963 2392779 - 2392796 + g 73 -3.5 -4.79667 | overlap 2392748 2392745 AAAGTAATTTAATGG TTGAGTA TCTG TACTTAA TTTTTCATGCATTTT TERM 2964 2393211 - 2393184 - G 76 -7.9 -4.1711 | gap 1, opp_overlap 2393192 AGCACTTTCAATAAA TTCACGAAGCTG TTCAT CAGCTT-GTGAA TACGCCGCGCCTTTG TERM 2965 2393704 - 2393689 - G 77 -6.1 -4.63218 | overlap 2393690 2393691 TTTTGGGTAAGAAAA CCGCT TGCCGC AGCGG CATAGCCTGCCGACT SBO_2400 2395186 - 2393936 - | formyl-coenzyme A transferase TERM 2966 2395073 - 2395035 - G 70 -10.2 -3.18849 | opp_overlap 2395033 2395029, overlap 2395033 TCGATATCAGGAATA TCTCGCAGCTGGTGACGC GTT ACGTCACCAACGCCGGGA CGTTCAATTTTAATA TERM 2967 2395644 - 2395608 - R 95 -11.9 -3.92542 | opp_overlap 2395607 2395606 GCGAGCGCCAAATAA TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA AATTGTCGGCTGGAG SBO_2401 2396331 - 2395699 - | hypothetical protein TERM 2968 2396758 - 2396748 - g 83 -5.4 -5.15381 | AAGAGACTGAAAAAA CATC AGC GATG ACGACCACACACTCT SBO_2402 2396627 - 2396902 + | hypothetical protein SBO_2403 2397221 - 2396979 - | hypothetical protein ddg 2397574 - 2398494 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 2969 2398528 - 2398555 + T 100 -11.4 -5.4756 | opp_overlap 2398526 TCCCTCCTCAAATCG GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 2970 2398944 - 2398963 + T 100 -13.6 -3.89215 | opp_overlap 2398944 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG TERM 2971 2398963 - 2398944 - T 100 -13.6 -4.8622 | opp_overlap 2398944 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG SBO_2405 2400224 - 2398986 - | aminotransferase TERM 2972 2399432 - 2399443 + g 77 -5.8 -4.63218 | opp_overlap 2399425 TAATACGAGCCAGGG CGCT GACC AGCG TTTTGTTGCCAACCA TERM 2973 2399692 - 2399711 + g 78 -8.6 -4.22346 | GGATTCGACGGGAAG CCGAGGAT CATC ATCTTCGG TTTTGGATAACTTTC TERM 2974 2400269 - 2400286 + H 71 -6.9 -4.11394 | overlap 2400271 2400282 ACCGTCCGAGCGACG CTGCCAC AATG GTGGCTG TTTTGAAAATAGCCT TERM 2975 2401208 - 2401195 - g 70 -3.7 -4.59773 | overlap 2401197 2401198 GTTGAGGGCGAAAAA GAGGC CAGC GCCGC GCGGCAGGCCAAGCT TERM 2976 2401218 - 2401197 - g 72 -7.9 -3.91506 | gap 1, overlap 2401195 2401198 TGAGGGCGAAAAAGA GGCCAG-CGC CGC GCGGCAGGCC AAGCTGGCGCTGGAT TERM 2977 2401469 - 2401448 - g 81 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC SBO_2406 2400601 - 2402298 + | putative sensor protein SBO_2407 2402313 - 2403047 + | putative 2-component transcriptional regulator SBO_2408 2403060 - 2403917 + | putative ARAC-type regulatory protein SBO_2409 2406415 - 2403920 - | putative PTS system enzyme IIA component, enzyme I TERM 2978 2404773 - 2404749 - G 78 -8.5 -4.23213 | opp_overlap 2404749 CCGATACTGAAGAAA TCGACCTCATC GCA GAAGTGGTCGA TGATGTAGCACACCG TERM 2979 2405304 - 2405332 + g 70 -4.6 -4.45259 | gap 2, opp_overlap 2405306, overlap 2405301 2405314 2405318 TTGTTATCACGGGAA TAGGC-CA-GCTGC GCG GCGGCCTGCGCCTG TTGTTTTTGGCGTTT SBO_2410 2407477 - 2406440 - | exoaminopeptidase SBO_2411 2408562 - 2407477 - | aminopeptidase TERM 2980 2407779 - 2407737 - G 81 -13.2 -2.71144 | CAGCCTCGGTAATGA CCCGGCGCGCGGCGTCGTCA ATC TGCTGGCAGCGCACGCCGGG GCGAATTGCAGAGAT TERM 2981 2407923 - 2407882 - G 77 -11.8 -3.22298 | gap 2 GCCATTCACCAGCAA GGTGCGCGTCATATCAGAGC AGTA GCCCTGATAC-A-GCGCACC AAAATCGAGAGTGAC SBO_2412 2409824 - 2408577 - | putative transport protein TERM 2982 2409252 - 2409278 + g 76 -12.4 -2.50994 | opp_overlap 2409254 2409259, overlap 2409251 2409254 2409259 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCACTTCAC TERM 2983 2409259 - 2409271 + g 72 -5.5 -4.56607 | opp_overlap 2409254 2409259, overlap 2409254 2409252 2409251 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC SBO_2413 2410172 - 2409846 - | putative PTS system enzyme IIB component glk 2411356 - 2410391 - | glucokinase SBO_2415 2411560 - 2412816 + | hypothetical protein SBO_2416 2412931 - 2413257 + | hypothetical protein TERM 2984 2413314 - 2413281 - T 73 -9.5 -3.44319 | opp_overlap 2413291, overlap 2413282 GCCAATGGAGCACAA TGCCTGATGCGACGC TAGC GCGTCTTATCAGGCC TACAAACCGGATCTT TERM 2985 2413313 - 2413282 - T 81 -13 -2.6627 | opp_overlap 2413291, overlap 2413281 CCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCGGATCT SBO_2417 2414636 - 2413398 - | manganese transport protein MntH TERM 2986 2414667 - 2414652 - H 73 -7.6 -4.07568 | opp_overlap 2414652 2414647 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTATGATA nupC 2414972 - 2416174 + | permease of transport system for 3 nucleosides TERM 2987 2416210 - 2416239 + T 89 -9.3 -4.59109 | overlap 2416212 GGGATAATTCCCCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2988 2416212 - 2416237 + T 100 -16.3 -3.90762 | overlap 2416210 GATAATTCCCCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_2419 2416644 - 2416207 - | IS4 orf SBO_2420 2417568 - 2416765 - | IS4 orf TERM 2989 2417583 - 2417558 - G 100 -9.8 -5.61596 | opp_overlap 2417558 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 2990 2417558 - 2417583 + g 73 -9.1 -3.61398 | opp_overlap 2417558 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC yfeA 2419970 - 2417664 - | hypothetical protein TERM 2991 2419089 - 2419071 - G 72 -4.4 -4.70659 | GGTGAGATTTAAAAA CGGATAGC GAA GCTTACCG ACCCCGAGGGTAAAG TERM 2992 2419134 - 2419118 - G 81 -6.5 -4.74215 | AGATGATGAAGAAAA CGGGTAC CAG GTAACCG GCAATAAAGTCGTTT TERM 2993 2420052 - 2420033 - H 100 -11.4 -5.43414 | AGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTGGAAATTTGGTGG TERM 2994 2420593 - 2420581 - g 82 -9.1 -4.28762 | overlap 2420571 ACAACGTCACCAAAA CCTGG CGT CCAGG GTGGCAAAGCCCGAC yfeC 2420473 - 2420832 + | hypothetical protein TERM 2995 2420959 - 2420945 - g 71 -2.8 -4.87318 | overlap 2420937 TGGAAAACGGAAAAA TTTCCC GGC GTGAAA GGCGGTCGTGCCAGA yfeD 2420834 - 2421226 + | hypothetical protein TERM 2996 2421271 - 2421221 - T 100 -16.4 -2.79574 | opp_overlap 2421235, overlap 2421235 GATATTGACGAATCA GCATAAATAAAAAACGGCAGGATA TTA TCTCCTGCCGTTTATCTTTTATGC GCTAATTACTGCTGG TERM 2997 2421235 - 2421257 + T 100 -12 -4.51238 | opp_overlap 2421235 2421221 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTATGCG TERM 2998 2421257 - 2421235 - T 100 -12 -5.73978 | opp_overlap 2421235, overlap 2421221 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTATGCG gltX 2422692 - 2421277 - | glutamyl-tRNA synthetase TERM 2999 2423381 - 2423349 - H 71 -9.9 -3.19463 | opp_overlap 2423350 2423358, overlap 2423350 2423358 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATTTGTAA TERM 3000 2423380 - 2423350 - H 80 -13.4 -2.51464 | opp_overlap 2423350 2423358, overlap 2423349 2423358 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3001 2423350 - 2423380 + H 88 -14.9 -2.94194 | opp_overlap 2423349 2423350 2423358, overlap 2423358 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3002 2423358 - 2423372 + H 100 -8.5 -5.24989 | opp_overlap 2423350 2423349 2423358, overlap 2423350 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3003 2423372 - 2423358 - H 100 -9.2 -5.17576 | opp_overlap 2423358 2423350, overlap 2423350 2423349 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3004 2423794 - 2423783 - g 71 -2.2 -5.00884 | ATCCTGTTGAAAAAA CGAC TCAT ATCG ATATCTATATCTGAT flxA 2423467 - 2423808 + | hypothetical protein yfeR 2424725 - 2423799 - | putative transcriptional regulator LYSR-type TERM 3005 2425033 - 2425048 + G 73 -9 -3.69621 | TTTGTGGGTAATGTG CAGCAC CTTC GTGCTG TTTCCGATTCTGGGT yfeH 2424815 - 2425813 + | putative cytochrome oxidase ypeB 2426028 - 2425810 - | putative cytoplasmic protein ligA 2428045 - 2426030 - | NAD-dependent DNA ligase LigA TERM 3006 2428084 - 2428068 - R 93 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAAGAGTTA zipA 2429102 - 2428116 - | cell division protein ZipA TERM 3007 2429203 - 2429237 + H 72 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3008 2429356 - 2429366 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3009 2429635 - 2429645 + G 72 -6.8 -4.20516 | AACTGGATTGCCGCT CCGT TTA ACGG TTTATTGGCTGAACA cysZ 2429332 - 2430093 + | putative sulfate transport protein CysZ TERM 3010 2430152 - 2430133 - f 77 -10.6 -3.34398 | opp_overlap 2430133, overlap 2430131 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3011 2430133 - 2430152 + F 93 -12.8 -3.7347 | opp_overlap 2430133 2430131 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3012 2430758 - 2430744 - g 82 -3.4 -5.19261 | overlap 2430745 AAATTCACGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2430278 - 2431249 + | cysteine synthase A TERM 3013 2431293 - 2431278 - f 100 -9 -5.08011 | opp_overlap 2431278, overlap 2431269 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC TERM 3014 2431278 - 2431293 + F 100 -9 -5.26316 | opp_overlap 2431269 2431278 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC ptsH 2431633 - 2431890 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3015 2432252 - 2432223 - g 72 -6.5 -4.36903 | gap 1, opp_overlap 2432223 2432223, overlap 2432225 CTGATTAAAGATAAA CACATGA-CAGCTG ACG CAGCTGCTCATGAA GTTATCGAAGGTCAG TERM 3016 2432250 - 2432225 - g 88 -11.3 -3.78193 | gap 1, opp_overlap 2432223 2432223, overlap 2432223 GATTAAAGATAAACA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2431935 - 2433662 + | phosphoenolpyruvate-protein phosphotransferase crr 2433703 - 2434212 + | glucose-specific PTS system component TERM 3017 2434249 - 2434278 + T 89 -9.3 -4.59109 | overlap 2434251 GCGCCCATCGGCGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3018 2434251 - 2434276 + T 100 -16.3 -3.90762 | overlap 2434249 GCCCATCGGCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_2442 2434898 - 2434260 - | IS4 orf SBO_2443 2435607 - 2435017 - | IS4 orf TERM 3019 2435622 - 2435597 - G 100 -9.8 -5.61596 | opp_overlap 2435597 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3020 2435597 - 2435622 + g 73 -9.1 -3.61398 | opp_overlap 2435597 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 3021 2435984 - 2435997 + H 78 -6.7 -4.56597 | CACCCATTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA TERM 3022 2436867 - 2436877 + G 72 -6.8 -4.25458 | GTAACCGCATTGACA CTGC CGA GCAG TTTATTGATAAGGTT yfeK 2436650 - 2437018 + | hypothetical protein cysM 2437932 - 2437021 - | cysteine synthase B TERM 3023 2438044 - 2438017 - R 89 -9.1 -4.72272 | gap 1, opp_overlap 2438017 2438034 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysA 2439163 - 2438066 - | sulfate/thiosulfate transporter subunit TERM 3024 2438723 - 2438737 + g 88 -11.4 -3.85698 | opp_overlap 2438709, overlap 2438716 AGCCAGCGCGCGCGC CAGCGC CAC GCGCTG TTTCTGGCCGCCGGA cysW 2440028 - 2439153 - | sulfate/thiosulfate transporter permease subunit cysU 2440861 - 2440028 - | sulfate/thiosulfate transporter subunit cysP 2441877 - 2440861 - | thiosulfate transporter subunit TERM 3025 2442168 - 2442145 - R 87 -11 -3.93038 | TAGTTCAAGACGAAA TCCTCCCCAC ACAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2442972 - 2442181 - | short chain dehydrogenase yfeT 2443958 - 2443101 - | hypothetical protein TERM 3026 2444986 - 2444968 - g 79 -2.4 -5.1925 | gap 1 GCAGAAGCTAAAAAA CGCC-TG GATCAA CACGGCG GCTTTATTCGTCAGG murQ 2444122 - 2445018 + | N-acetylmuramic acid-6-phosphate etherase TERM 3027 2445201 - 2445217 + G 84 -7.9 -4.60487 | CGTCATTTTGACCAG CGACCAG GTG CAGGTCG TTTTTGGACCTGGTA TERM 3028 2446198 - 2446235 + G 72 -5.6 -4.55697 | gap 2, opp_overlap 2446197, overlap 2446197 2446196 CTGCCCCGCATGAAG CCGTTTGT--CACCGCCT GTTT AGGCGGTGCGGCGGGCGG TTTGTTTATCGGCCT murP 2445022 - 2446446 + | N-acetylmuramic acid phosphotransfer permease TERM 3029 2446594 - 2446634 + T 71 -10.4 -2.72661 | opp_overlap 2446566 2446565 2446601, overlap 2446582 2446594 2446631 GGATCGCTGGATTAG CCAGCAAGTTGATGCCGG TTATC CCGGCGTAAACCTGCTGA TCATTAAAGATAATC TERM 3030 2447762 - 2447789 + T 95 -13.5 -3.79251 | opp_overlap 2447762 CAAAAGTAATAAAAA GGCCAGTCAGT TTTGTT ACTGGCTGGCC TTTAATCATAGAATC TERM 3031 2447789 - 2447762 - T 100 -11.3 -5.28166 | opp_overlap 2447762 CAAAAGTAATAAAAA GGCCAGTCAGT TTTGTT ACTGGCTGGCC TTTAATCATAGAATC TERM 3032 2447820 - 2447810 - T 71 -6.8 -4.12397 | TCATAGAATCAGAAA CGCT TAC AGCG CCATCAGCTTGTCCA SBO_2456 2448739 - 2447813 - | hypothetical protein TERM 3033 2447859 - 2447869 + g 72 -8.2 -3.72576 | GCGAAGTAATAGCCG CCGG TTA CCGG TTTGGTGAAGCGCAA TERM 3034 2448247 - 2448272 + g 74 -6 -4.54047 | opp_overlap 2448239 2448238, overlap 2448238 2448249 TGATAACCGCCACTT CGCGGCGCGT CTCTTC ACCCGCCGGG TTTTCTGTACCGTCA TERM 3035 2448752 - 2448734 - G 85 -10.3 -4.20868 | opp_overlap 2448734 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT TERM 3036 2448734 - 2448752 + g 77 -10.3 -3.63341 | opp_overlap 2448734 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT SBO_2457 2449383 - 2448808 - | hypothetical protein TERM 3037 2449155 - 2449135 - G 77 -3.1 -5.06451 | CATCACTTCAAAAAA GCGCACCAC GTT GCCGTTCGC GGTTTTCATTCCGCT TERM 3038 2449578 - 2449589 + r 72 -5.8 -4.40123 | opp_overlap 2449573 2449578 2449577 CCGGCATAAACAAAG CGCA CCTC TGCG TTATTCTTTTTCTTC SBO_2458 2450045 - 2449590 - | hypothetical protein TERM 3039 2449834 - 2449818 - G 74 -2.1 -5.06816 | overlap 2449819 2449820 ACCGCTCAACAAAAA CGCCAGC ACC GCCGGAA TACCGGGAATCAACC SBO_2459 2450451 - 2450026 - | putative acetyltransferase TERM 3040 2451466 - 2451455 - g 72 -5.8 -4.36914 | opp_overlap 2451455, overlap 2451456 CGTTTCGTCAGAAAA TCGC CACA GCGA TTGCTGAAGGCGTGA amiA 2450665 - 2451534 + | N-acetylmuramoyl-l-alanine amidase I TERM 3041 2451762 - 2451808 + G 100 -17.5 -3.69323 | gap 2 GCCTGCTTCCGCCAC CGCTCATCGCC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCG TTTCACTGGTAGTGC TERM 3042 2451855 - 2451866 + G 100 -3.6 -5.7946 | overlap 2451853 TGTTCCCACCAGCCA CGCG AATG TGCG TTTTTTTATTGCCGA hemF 2451538 - 2452437 + | coproporphyrinogen III oxidase yfeG 2453495 - 2452443 - | transcriptional regulator EutR TERM 3043 2452924 - 2452958 + g 70 -7.1 -4.02456 | gap 2, opp_overlap 2452944, overlap 2452952 2452954 TTCTCGCAAAACGTC GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC TTTATGCTGCTCTTT SBO_2463 2454047 - 2453541 - | hypothetical protein TERM 3044 2453589 - 2453621 + g 70 -4.8 -4.56597 | overlap 2453591 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCCAGCGGCCA SBO_2464 2454713 - 2454054 - | hypothetical protein eutC 2455499 - 2454723 - | ethanolamine ammonia-lyase small subunit insB 2456078 - 2455575 - | IS1 ORF2 SBO_2467 2456153 - 2456389 + | putative IS1 encoded protein TERM 3045 2456423 - 2456453 + T 72 -8.9 -3.62096 | gap 1, opp_overlap 2456420 TCAGAAGAACAGTGA CGGATCGCCCGCCC GTTT GGTCAGGCGA-CCG TTTGCCATAATGCCC eutB 2458030 - 2456408 - | ethanolamine ammonia-lyase, heavy chain TERM 3046 2457832 - 2457810 - G 79 -12.7 -3.02511 | GCGATGCCTTTAACA GCCAGGCTG CGCGT CAGCCCGGC GGTCATCCCTGCCTG eutJ 2458856 - 2458020 - | ethanolamine utilization TERM 3047 2458210 - 2458231 + g 81 -4.3 -5.14563 | opp_overlap 2458194 2458210, overlap 2458215 CCCTGCCCTTCAATA TGCCGGGCG ACAA TGTCCGCCA TTTTTTCGTACACCG eutE 2460270 - 2458867 - | ethanolamine utilization TERM 3048 2459548 - 2459580 + g 72 -6.2 -4.33803 | gap 1 TTCATCCACCACTAC CGGCGGGTTGCCAGC GCCT GC-GGCAATCAGACG TTTATTGGTGTGTTT TERM 3049 2459756 - 2459772 + g 71 -2.1 -5.00616 | overlap 2459757 TGGTTGAGCAGCGTG ATCGCCC GCT GGGAGAC TTTTTTCGCCGCCGG TERM 3050 2459887 - 2459902 + g 70 -6 -4.2803 | opp_overlap 2459886 AGTTACCGAAGCCAC CACGCC CCAG GGCGCG TTTTCAATTAAAGTC TERM 3051 2459958 - 2459989 + g 70 -4.2 -4.60924 | gap 1, opp_overlap 2459961, overlap 2459960 GCGGAGAGAGACACT CAACGC-CTGGCGTG CCG CGCGCCTGAGCGACG TTTTTGGCAAATTTA cchB 2460569 - 2460282 - | detox protein cchA 2460969 - 2460676 - | detox protein TERM 3052 2460777 - 2460810 + g 71 -9.5 -3.55444 | gap 1 CCAGCTCGCCGATAC GCTGTG-CCGCTGCGG CAC CTGCATCGGTCGCGGC TTTACAGGCTGCAAC eutD 2462024 - 2461008 - | phosphotransacetylase TERM 3053 2461984 - 2461973 - G 70 -3.6 -4.60041 | ACGCATCCGGAAAAA CCAC TCTG GCGG GCGCTCGCAACGCCA SBO_2474 2462823 - 2462014 - | hypothetical protein TERM 3054 2462673 - 2462662 - G 70 -5.8 -4.16842 | opp_overlap 2462665 TTCATCGTCAACAAA CAGG CGGC CCTG CTCGTCAATAAACTT SBO_2475 2463521 - 2462820 - | hypothetical protein SBO_2476 2463975 - 2463496 - | hypothetical protein TERM 3055 2463874 - 2463884 + gr 71 -3.2 -4.82901 | CTTATCATTAAATTC CACG GCC TGTG TTTTTCTGGCGAGGG SBO_2477 2464395 - 2463988 - | hypothetical protein TERM 3056 2464158 - 2464172 + g 82 -11.4 -3.53761 | opp_overlap 2464157 2464154 TCAGCGCTAAATCAC CGGCGA TCA TCGCCG TTTCGCCGGGAGTTA TERM 3057 2464504 - 2464489 - R 77 -3.4 -5.10033 | TGAATATAAATAAAA TAATAT CGAG ATATTA TATAGACTGCTTTTT TERM 3058 2464598 - 2464569 - R 100 -15.1 -3.66378 | overlap 2464570 TATATTGCAGCCAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAAAAAGA TERM 3059 2464597 - 2464570 - R 100 -18.6 -2.79505 | overlap 2464569 ATATTGCAGCCAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAAAAAG SBO_2478 2466894 - 2464615 - | malic enzyme TERM 3060 2465051 - 2465030 - G 70 -5.1 -4.4261 | gap 1, overlap 2465031 GGCTCAATACCAAAA CGACGGACAG TTT CTG-CCGCCA TCAAGGTGATCTCCG TERM 3061 2465688 - 2465667 - G 72 -10.1 -3.32769 | opp_overlap 2465683 CGTCGAAATCAGCAA TCGGACGCG TCGC CACGCCCGA CTCCATCGCGGCTTT TERM 3062 2466052 - 2466065 + g 70 -3.8 -4.6635 | CAGCGCCAGGATCAT TGGC GCACGA GCCA TTTTCTTCACCATTT TERM 3063 2466333 - 2466343 + g 71 -3.2 -4.82901 | opp_overlap 2466322 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3064 2466958 - 2466930 - R 78 -6.1 -4.55697 | gap 1, opp_overlap 2466948 ACGTTCACAAATAAA GTGTGTGGGCAA CAGCCC CTGCCCACA-AC GTGGCGCACATTATT TERM 3065 2467652 - 2467693 + r 83 -6.5 -5.04325 | opp_overlap 2467635, overlap 2467653 GCAACCTGACGCTGC TGTTTTCTTTTGCCCAGGC GCGG GCCTGTGCGGAAGCAGGCG TTTTTCTGATTTCGC TERM 3066 2468455 - 2468439 - R 73 -7.9 -4.13945 | opp_overlap 2468439 AGTTGCATTCGAAAA CCCCAGG CCA CCCGGAG ATTGGTTATACGCCC SBO_2481 2470642 - 2469554 - | putative transposase TERM 3067 2469699 - 2469717 + g 91 -3 -5.47159 | overlap 2469678 2469675 TCTGTCAATGACGGG GCGGGGTA AAT TTTCCTGC TTTTTTGTATTGCCG TERM 3068 2471701 - 2471752 + r 90 -13.6 -3.30243 | GGATGCTGATTGCCG GACGCTGATTGCCGGATGCGACTC TGAC GCGTCTTATCCGGCCTACAGCGTC TTATCCGGCCTACAT TERM 3069 2471825 - 2471802 - R 85 -12.4 -3.35798 | opp_overlap 2471816 ACGGGTGATCCACAA CGTGGGCCAG GCGT CTGGCCCATG CCAGTTATCGCAGGT SBO_2482 2472827 - 2471784 - | hypothetical protein TERM 3070 2472826 - 2472815 - G 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAG CGCA TGGACGGTACGACCC yffH 2473528 - 2472953 - | hypothetical protein TERM 3071 2473529 - 2473578 + r 79 -9.3 -4.03234 | overlap 2473530 GATTTGTTGCGTCAT ACCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGGG TTTGTCTGCGCAGGC TERM 3072 2473530 - 2473577 + r 80 -12.8 -3.01726 | overlap 2473529 ATTTGTTGCGTCATA CCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGG GTTTGTCTGCGCAGG yffG 2475575 - 2473596 - | putative oxidoreductase Fe-S binding subunit TERM 3073 2475799 - 2475822 + G 100 -5.2 -5.55698 | gap 1, opp_overlap 2475796, overlap 2475799 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3074 2475799 - 2475821 + G 72 -7.6 -3.91792 | opp_overlap 2475796, overlap 2475799 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3075 2476498 - 2476488 - g 71 -3.2 -4.81212 | overlap 2476490 GTCAGTAGAAGAAAA GACC CGC GATC TCCACGAGGCCAAGC narQ 2475781 - 2477481 + | nitrate/nitrite sensor protein NarQ TERM 3076 2479160 - 2479183 + F 71 -10.4 -2.73007 | overlap 2479159 2479162 2479180 2479181 AAAAGGTGAGCATCA CGGGCAAAAA GGCT TTTTTGCCTG GTTTAACCAGATGTT TERM 3077 2479250 - 2479227 - f 80 -6.6 -4.74801 | opp_overlap 2479243, overlap 2479229 2479241 GAACGCTACGAAAAA GGGGTGGCGA AAAT TCTCCACCGC AGCCTGCGCTGGATT TERM 3078 2479243 - 2479263 + F 79 -9.7 -3.67102 | opp_overlap 2479229 2479227 2479241 GGGTGGCGAAAATTC TCCACCGCA GCC TGCGCTGGA TTGTGATTTATGTCC TERM 3079 2479637 - 2479620 - f 71 -6.9 -4.11363 | AACAAGATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCGCCAGCAATT TERM 3080 2480792 - 2480757 - f 82 -11.4 -3.53444 | opp_overlap 2480764, overlap 2480764 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCTAATG TGTCGCCTTTTTCA ACTTTCCGATTAAGA TERM 3081 2480785 - 2480764 - f 91 -7.3 -5.57396 | opp_overlap 2480764, overlap 2480757 ATAAGCAATAAAAAA GGCGACA TGCTAATG TGTCGCC TTTTTCAACTTTCCG TERM 3082 2480764 - 2480785 + F 84 -8.7 -4.70879 | opp_overlap 2480757 2480764 ATAAGCAATAAAAAA GGCGACATG CTAA TGTGTCGCC TTTTTCAACTTTCCG TERM 3083 2480803 - 2480827 + F 74 -11.5 -2.79609 | opp_overlap 2480806 2480809, overlap 2480802 2480800 2480806 2480809 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCGGGTTCTTG CTGTTTGTACTTTGT TERM 3084 2480806 - 2480824 + F 82 -11 -3.52009 | opp_overlap 2480806 2480809, overlap 2480803 2480802 2480800 2480809 CAACTTTCCGATTAA GAACCTGC TCA GCGGGTTC TTGCTGTTTGTACTT TERM 3085 2481540 - 2481508 - g 72 -4.8 -4.64676 | opp_overlap 2481515 2481530 CCACCCGCAATAAAA TCACCGATGCGGCC TCTGC GGCGGCATTAATGA CTGAAATGCCTTCAA yffB 2481291 - 2481647 + | hypothetical protein dapE 2481651 - 2482778 + | succinyl-diaminopimelate desuccinylase SBO_2489 2482782 - 2483006 + | hypothetical protein TERM 3086 2483089 - 2483035 - T 79 -11.3 -3.30124 | opp_overlap 2483035 2483036 2483078, overlap 2483036 2483068 CCGTAGGCCGGATAA GGCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGCG TCTTATCAGGCCAGG TERM 3087 2483088 - 2483036 - T 86 -14.8 -2.57931 | opp_overlap 2483036 2483035 2483078, overlap 2483035 2483068 CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG TERM 3088 2483036 - 2483088 + T 78 -12.6 -2.52623 | opp_overlap 2483035 2483036 2483068, overlap 2483035 2483078 CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG ypfH 2483814 - 2483116 - | esterase YpfH ypfI 2485903 - 2483888 - | hypothetical protein TERM 3089 2485514 - 2485503 - G 72 -5.8 -4.38154 | AGATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA SBO_2492 2486781 - 2485918 - | hypothetical protein TERM 3090 2486440 - 2486403 - G 72 -9.7 -3.30338 | opp_overlap 2486411 AGAACGGCCCCATAA TGGACTGGCCCGCCCCG CAGC CGGTGCGCGTCATTCCA CGGTACATGACCAGC purC 2487662 - 2486949 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3091 2487013 - 2487049 + g 72 -5.7 -4.55295 | opp_overlap 2487026, overlap 2487015 ATCAGGCCACCGAGG CTCTGGCGGAAACGGTC TTT GTCCATTTTCTCCAGTG TTTCTTTGTCCCACA TERM 3092 2487844 - 2487871 + r 73 -4 -4.90266 | opp_overlap 2487848, overlap 2487846 2487848 CGTATCATATCAGAA AAAAGGGCCGGA TGAC TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3093 2487848 - 2487867 + r 72 -9.2 -3.61182 | opp_overlap 2487848, overlap 2487846 2487844 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC TERM 3094 2487867 - 2487848 - R 100 -11.4 -5.34555 | opp_overlap 2487846 2487844 2487848 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC nlpB 2488912 - 2487875 - | lipoprotein TERM 3095 2488049 - 2488067 + g 76 -11 -3.41878 | GCCCAGTTCCTGCCA GTCGCTGT CAG ACAGCGGC TTATAAGTTACGGCC TERM 3096 2488498 - 2488526 + g 77 -6 -4.62069 | opp_overlap 2488483 2488479, overlap 2488501 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2489804 - 2488926 - | dihydrodipicolinate synthase gcvR 2489950 - 2490522 + | glycine cleavage system transcriptional repressor bcp 2490522 - 2490992 + | thioredoxin-dependent thiol peroxidase SBO_2498 2492132 - 2492482 + | putative protein encoded within IS TERM 3097 2492517 - 2492486 - f 72 -5.2 -4.60255 | gap 1, overlap 2492487 2492488 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 3098 2492516 - 2492488 - f 71 -10.3 -2.60776 | overlap 2492486 2492487 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_2499 2492702 - 2494105 + | putative protein encoded within IS TERM 3099 2494134 - 2494103 - T 76 -7.5 -4.258 | gap 2, opp_overlap 2494106 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CTACTGAGATGGCTT SBO_2500 2494846 - 2494109 - | IS600 ORF2 SBO_2501 2495184 - 2494882 - | IS600 ORF1 TERM 3100 2495584 - 2495572 - H 79 -2.6 -5.35815 | opp_overlap 2495575 CAGATGAAAGAAAAA CAGC GCCTT GCCG CAAGCTGGTTTGCCA TERM 3101 2495605 - 2495617 + H 76 -9.1 -3.6682 | TGGTTTGCCAATGGC GGGGA GGA TCCCC TTTCCCTCACTCAGG TERM 3102 2498261 - 2498273 + G 72 -7.7 -3.95022 | CTGCTTCATTGAGAT GGGAA AAA TTCCC TTTGATGTTGCTGAA TERM 3103 2498521 - 2498536 + G 79 -2.4 -5.2189 | opp_overlap 2498519 CAATCGCAGAAAACA CGCTGG CACG CGGGCG TTTTTTACTCATTCA hyfC 2497650 - 2498618 + | hydrogenase 4 membrane subunit TERM 3104 2499585 - 2499597 + F 76 -9.1 -3.69283 | GATTACCGGTGTGCC GCCGT TCA ACGGC TTCTTCAGTAAATTC hyfE 2499876 - 2500526 + | hydrogenase 4 membrane subunit TERM 3105 2501421 - 2501433 + G 95 -9.1 -4.94972 | CGGCATGTTGTCGGT TGCCG TGG CGGCA TTTTTCATTCTGGTA hyfF 2500531 - 2502111 + | hydrogenase 4 subunit F TERM 3106 2502970 - 2502984 + G 74 -2.8 -4.89562 | TCATTTGCTCAACCT TGGC CTCTCCT GCCA TTTTGTTGGTTTTGA hyfG 2502101 - 2503816 + | hydrogenase 4 subunit hyfH 2503826 - 2504365 + | hydrogenase 4 subunit H hyfI 2504362 - 2505120 + | hydrogenase 4 Fe-S subunit TERM 3107 2505513 - 2505491 - gT 77 -11.3 -3.16055 | GAAATTGTGCAGGAA CCGGCCATC TATCT GATGGCCAG AAAAATTGCGTGAGA SBO_2511 2505050 - 2505526 + | putative protein processing element TERM 3108 2507660 - 2507635 - T 70 -4.7 -4.38712 | gap 1, overlap 2507636 TTGAGCGCCAGAAAA GCGGCAAT-CGC TGA ACGGATTGCCGT CCATAAAATTGCCCG TERM 3109 2508437 - 2508472 + T 74 -8.2 -3.94877 | opp_overlap 2508440, overlap 2508438 GTCAGGAATCCTGAA AAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGA TTATTCTTGCGCGAT TERM 3110 2508438 - 2508471 + T 78 -11.7 -2.96444 | opp_overlap 2508440, overlap 2508437 TCAGGAATCCTGAAA AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG ATTATTCTTGCGCGA TERM 3111 2508469 - 2508440 - T 100 -16.5 -4.62872 | opp_overlap 2508438 2508437 AGGAATCCTGAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA AGATTATTCTTGCGC perM 2509534 - 2508473 - | putative permease TERM 3112 2510226 - 2510200 - g 83 -13 -3.07816 | opp_overlap 2510216, overlap 2510202 GCGCGAGCGATGGAA GATCAGCAGCGC AGC ACGCCGCTGACC TGGGTCGGCGCGTTA TERM 3113 2510224 - 2510202 - g 75 -12 -3.09878 | opp_overlap 2510216, overlap 2510200 GCGAGCGATGGAAGA TCAGCAGCGC AGC ACGCCGCTGA CCTGGGTCGGCGCGT SBO_2515 2509747 - 2511210 + | hypothetical protein SBO_2516 2511231 - 2511590 + | putative oxidoreductase SBO_2517 2512474 - 2511728 - | DNA replication initiation factor TERM 3114 2512484 - 2512526 + r 76 -7.7 -4.26393 | opp_overlap 2512480, overlap 2512490 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2513813 - 2512524 - | uracil transporter TERM 3115 2512894 - 2512868 - G 72 -8.6 -3.767 | overlap 2512883 TACCGACGCAGGAAA GCAGGATAGCGA AAA TCGCCGCCCCGC CGATAACCCAGGTAC TERM 3116 2513033 - 2513048 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3117 2513854 - 2513888 + r 83 -4.3 -5.44198 | opp_overlap 2513862, overlap 2513857 2513862 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3118 2513857 - 2513885 + r 78 -6 -4.74161 | opp_overlap 2513862, overlap 2513854 2513862 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3119 2513862 - 2513880 + r 90 -10.3 -4.2711 | opp_overlap 2513862, overlap 2513857 2513854 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT TERM 3120 2513880 - 2513862 - R 100 -11 -5.81412 | opp_overlap 2513862 2513857 2513854 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT upp 2514525 - 2513899 - | uracil phosphoribosyltransferase purM 2514849 - 2515886 + | phosphoribosylaminoimidazole synthetase TERM 3121 2516027 - 2515996 - g 100 -13.7 -3.72027 | opp_overlap 2516018 2516022, overlap 2515993 AGTTTTCAGCAATAA GGCCGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3122 2516022 - 2516034 + G 72 -10.5 -3.02144 | opp_overlap 2515996, overlap 2516018 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACGCATAC purN 2515886 - 2516524 + | phosphoribosylglycinamide formyltransferase TERM 3123 2516561 - 2516542 - f 72 -10.7 -2.78679 | opp_overlap 2516542, overlap 2516541 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3124 2516542 - 2516561 + F 100 -10.7 -4.74504 | opp_overlap 2516541 2516542 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3125 2518532 - 2518495 - g 70 -6.9 -4.10657 | overlap 2518496 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2516696 - 2518762 + | polyphosphate kinase TERM 3126 2518790 - 2518816 + G 74 -10.8 -3.23853 | overlap 2518788 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2518767 - 2520308 + | exopolyphosphatase TERM 3127 2520314 - 2520342 + F 100 -18.2 -3.6279 | CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT TERM 3128 2520854 - 2520834 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 3129 2521206 - 2521195 - g 77 -5.8 -4.63218 | opp_overlap 2521200 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_2524 2520775 - 2521614 + | IS911 ORF2 SBO_2525 2524508 - 2523621 - | IS629 ORF2 TERM 3130 2524188 - 2524200 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_2526 2524783 - 2524508 - | IS629 ORF1 TERM 3131 2525046 - 2525035 - R 76 -2.2 -5.32599 | overlap 2525027 GATAAAAGAGAAAAA CCTC ACCG GAAG AAATATGCGCGAAAG insB 2525693 - 2525190 - | IS1 ORF2 SBO_2529 2525786 - 2526031 + | putative IS1 encoded protein SBO_2530 2526047 - 2526586 + | hypothetical protein TERM 3132 2526626 - 2526655 + T 85 -12.3 -3.41693 | opp_overlap 2526631, overlap 2526631 TGATTCTTGAAGATA AAAAACCCTCTGT AGTA ACAGAGGGTTTTG TTCATTCATAGTGCA TERM 3133 2526631 - 2526650 + T 100 -12.2 -4.80178 | opp_overlap 2526631, overlap 2526626 CTTGAAGATAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA TERM 3134 2526650 - 2526631 - T 100 -12.2 -5.47159 | opp_overlap 2526631 2526626 CTTGAAGATAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA guaA 2528258 - 2526681 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3135 2528320 - 2528298 - R 100 -14.9 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA GTCGGGCGA AGAGAATCAGGAGCC guaB 2529793 - 2528327 - | inositol-5-monophosphate dehydrogenase TERM 3136 2529245 - 2529259 + g 73 -4.2 -4.79667 | overlap 2529256 GTCATCAACCACCAG CGCTTT TTC AACGCG TTTTTCGTGCATTTT xseA 2529955 - 2531325 + | exodeoxyribonuclease VII large subunit SBO_2534 2531573 - 2531322 - | hypothetical protein engA 2533078 - 2531606 - | GTP-binding protein EngA TERM 3137 2533176 - 2533145 - R 100 -13.8 -3.90048 | opp_overlap 2533151, overlap 2533146 2533151 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3138 2533175 - 2533146 - R 100 -17.3 -2.93708 | opp_overlap 2533151, overlap 2533145 2533151 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3139 2533170 - 2533151 - R 95 -11.4 -4.60746 | opp_overlap 2533151, overlap 2533146 2533145 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3140 2533151 - 2533170 + r 79 -9.2 -4.11216 | opp_overlap 2533151 2533146 2533145 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG SBO_2536 2534374 - 2533196 - | outer membrane protein assembly complex subunit YfgL TERM 3141 2533622 - 2533606 - G 78 -8.7 -4.18506 | overlap 2533618 CCAGCGCGAAAACAA CGCCGTT AAC AACGACG GGAGTCGTGTCAACA TERM 3142 2533778 - 2533767 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC SBO_2537 2535005 - 2534385 - | hypothetical protein TERM 3143 2534548 - 2534566 + g 77 -8.2 -4.07687 | GCAGCCCACCCTTCA CCTTTGAT GGT ATCAAGGG TTTTCAGCGCGGCAT TERM 3144 2534817 - 2534829 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2536297 - 2535023 - | histidyl-tRNA synthetase TERM 3145 2536261 - 2536286 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3146 2536370 - 2536324 - R 91 -8.1 -5.0916 | gap 2, opp_overlap 2536328 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCCTCAA TGT TTG-GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 3147 2536399 - 2536379 - R 82 -13.3 -3.00298 | opp_overlap 2536373 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2537526 - 2536408 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2538566 - 2537553 - | hypothetical protein TERM 3148 2538846 - 2538809 - R 100 -12.2 -4.42653 | gap 1, overlap 2538811 ACTTCATTCATAAAA GATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT TERM 3149 2538844 - 2538811 - R 100 -14.8 -3.82117 | gap 1, overlap 2538809 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC yfgB 2540005 - 2538851 - | hypothetical protein TERM 3150 2539767 - 2539787 + g 71 -9 -3.50832 | gap 1, overlap 2539764 TCTTCAACCACTTCC GGTGCGCGG ATTT CCGC-CACC TCTTTCAGTTTGCCG TERM 3151 2540094 - 2540063 - R 91 -8.7 -5.04249 | gap 2, opp_overlap 2540062 2540059 2540058, overlap 2540065 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2540586 - 2540155 - | nucleoside diphosphate kinase pbpC 2543047 - 2540735 - | penicillin-binding protein 1C TERM 3152 2542023 - 2542010 - G 70 -3.8 -4.60949 | overlap 2542006 CAGACCATAAACAAA CGGT TTGAGC ACCG ATCCTGGCGATCGGA TERM 3153 2543007 - 2542994 - G 75 -6.7 -4.30635 | AAGAAAAAGGAGAAA TGGCA CAGC TGCCA GCGTTATCCAGCAGC SBO_2544 2548009 - 2543048 - | hypothetical protein TERM 3154 2543605 - 2543628 + g 70 -5.2 -4.41548 | AGGTGGCAAGTTGAT CGCTATTCAG ATTG CTGTTTAGCG TTTTCTCGCCTGTCA TERM 3155 2543792 - 2543809 + g 74 -2.7 -4.87892 | GTTCAGCAAAGTGTA CTGCT CATCGGGT AGCAG TTTATTTTCTTCCAG TERM 3156 2544033 - 2544046 + g 84 -8.1 -4.72272 | CAGATTTCACGCAGC GCACC CAGT GGTGC TTTTTGCTGACGGGC TERM 3157 2545585 - 2545543 - G 74 -10.9 -3.27408 | gap 2, overlap 2545541 GCGTACTTAAATACA GATCATGACGATTCCAGGT TTTATCG ACC-GGAATCGTCA-GATC CAGCCCTTGAGCCGG TERM 3158 2546416 - 2546388 - G 76 -8.1 -4.27316 | overlap 2546396 2546406 TCGCCGAATTCAAAA CCAGGTAAGGCTG ACA CAGCCTCACGCAG TGGGCGCAGGAAAAG TERM 3159 2547846 - 2547862 + g 95 -12.3 -4.26903 | overlap 2547858 TGGGCCAGTTTTTGT CTCTCCG GCA CGGAGAG TTTTGCTGAACTCGC TERM 3160 2548919 - 2548947 + G 70 -3.7 -4.64676 | overlap 2548888 2548922 ACCAATTATCGTCAG CTGCGGCTCTGGT GTA ACGGCAGCCGTGG TTTTGTTAGCACTCG sseA 2548209 - 2549054 + | 3-mercaptopyruvate sulfurtransferase TERM 3161 2549063 - 2549106 + T 100 -18.4 -2.90194 | opp_overlap 2549070 2549077, overlap 2549066 2549070 2549077 GAAATAAGTATTTTA CAGGCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 3162 2549066 - 2549103 + T 100 -20.9 -2.69964 | opp_overlap 2549070 2549077, overlap 2549063 2549070 2549077 ATAAGTATTTTACAG GCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGC TGGTCTGGTTCGCGG TERM 3163 2549099 - 2549070 - T 86 -13.8 -3.12999 | opp_overlap 2549066 2549063 2549070 2549077, overlap 2549077 GTATTTTACAGGCAA TAAAAAACCGCC GAATTT GGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3164 2549070 - 2549099 + T 90 -14.5 -3.26433 | opp_overlap 2549070 2549077, overlap 2549066 2549063 2549077 GTATTTTACAGGCAA TAAAAAACCGCCG AATT TGGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3165 2549092 - 2549077 - T 100 -7.5 -5.49234 | opp_overlap 2549070 2549066 2549063 2549077, overlap 2549070 ACAGGCAATAAAAAA CCGCC GAATTT GGCGG TTTTTTATTGCTGGT TERM 3166 2549077 - 2549092 + T 100 -8.2 -5.52023 | opp_overlap 2549077 2549070, overlap 2549070 2549066 2549063 ACAGGCAATAAAAAA CCGCCG AATT TGGCGG TTTTTTATTGCTGGT TERM 3167 2549184 - 2549215 + T 79 -9 -4.10144 | gap 1, opp_overlap 2549174 2549187, overlap 2549187 GACAATACTCGCCAG TAACTCTCTTTTTGT CAA GCAA-AAGAGAGTTA TTATTGTTCTGTTAG TERM 3168 2549472 - 2549458 - T 89 -11.4 -4.15884 | opp_overlap 2549444 CCAAGTAAATAATAA CCGGAG TCT CTCCGG CGACAATTTACTGGT TERM 3169 2549521 - 2549544 + T 95 -12.4 -4.3208 | opp_overlap 2549516, overlap 2549523 CAGCAAGTAAGCCCG AATGCCGCCC TTTA GGGCGGCATA TTTTAGATTATCCGG TERM 3170 2549523 - 2549542 + T 100 -15 -3.76167 | opp_overlap 2549516, overlap 2549521 GCAAGTAAGCCCGAA TGCCGCCC TTTA GGGCGGCA TATTTTAGATTATCC sseB 2550323 - 2549547 - | enhanced serine sensitivity protein SseB TERM 3171 2550052 - 2550081 + g 83 -13 -3.02263 | opp_overlap 2550049, overlap 2550056 2550079 2550080 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCGCCTGT TERM 3172 2550424 - 2550459 + r 86 -11.8 -3.51976 | opp_overlap 2550421 2550420 2550436, overlap 2550420 2550427 AATTTGCAGAATTTG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA TTAGTTTACGCCGTT TERM 3173 2550427 - 2550456 + r 81 -13.5 -2.59569 | opp_overlap 2550421 2550420 2550436, overlap 2550424 2550420 TTGCAGAATTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATATTAGTTTACGCC pepB 2551748 - 2550465 - | aminopeptidase B TERM 3174 2550621 - 2550600 - G 70 -6.5 -4.16284 | gap 1, overlap 2550601 2550612 ATAGTTCTCAACAAA GTGCGACAGG AAG CCCGCCGC-C GTGCTCGCGCCTGCC TERM 3175 2551791 - 2551772 - R 95 -12.8 -4.07568 | TCCTTCTTTGTAAAA GGGCCGCC AGTT GGCAGCCC CAGGATTTTTCCGCT yfhJ 2552126 - 2551926 - | hypothetical protein fdx 2552473 - 2552138 - | [2FE-2S] ferredoxin, electron carrer protein hscA 2554325 - 2552475 - | chaperone protein HscA TERM 3176 2553806 - 2553818 + g 76 -9.1 -3.74693 | CATGCAACCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2554857 - 2554342 - | co-chaperone HscB TERM 3177 2554937 - 2554911 - R 84 -8.7 -4.6951 | gap 1, opp_overlap 2554911 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2555276 - 2554953 - | iron-sulfur cluster assembly protein SBO_2553 2555679 - 2555293 - | scaffold protein yfhO 2556945 - 2555707 - | putative aminotransferase SBO_2555 2557521 - 2557033 - | DNA-binding transcriptional regulator IscR TERM 3178 2557544 - 2557556 + r 91 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3179 2557606 - 2557653 + r 72 -8.6 -3.6715 | overlap 2557608 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 3180 2557608 - 2557651 + r 79 -11.2 -3.4149 | overlap 2557606 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT SBO_2556 2558531 - 2557791 - | putative ATP synthase beta subunit TERM 3181 2558415 - 2558452 + g 76 -7.9 -4.25104 | gap 1, overlap 2558405 2558418 GGAGTCGGGTTTCAC CAGT-GGATTAACCAGCC ACA GATTGGTTAATCCCATTG TTTTCATGGCACGGG TERM 3182 2558418 - 2558449 + g 70 -6 -4.25256 | gap 1, overlap 2558415 GTCGGGTTTCACCAG T-GGATTAACCAGCC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 3183 2558668 - 2558696 + G 79 -12.3 -3.02166 | opp_overlap 2558669, overlap 2558664 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 3184 2558695 - 2558669 - g 87 -13.6 -3.04263 | opp_overlap 2558668 2558664 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2558650 - 2559453 + | inositol monophosphatase SBO_2558 2559571 - 2560452 + | putative enzyme csiE 2560643 - 2561923 + | stationary phase inducible protein CsiE hcaT 2563054 - 2561915 - | putative 3-phenylpropionic acid transporter TERM 3185 2562195 - 2562179 - G 70 -10.1 -3.23216 | opp_overlap 2562179 2562182 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC TERM 3186 2562460 - 2562437 - G 86 -11 -3.9009 | overlap 2562454 2562455 AACGCAGGCCAGAAA GCGCCAGTTC TGAA GAACCAGCGC CAACCACGCTGACCA TERM 3187 2563187 - 2563176 - R 73 -2.2 -5.22794 | gap 1, opp_overlap 2563177, overlap 2563177 ACAAGCACTAAAAAA CTGCG ATC CGC-G ACGCATGTTGCAAAA hcaR 2564104 - 2563214 - | DNA-binding transcriptional regulator HcaR hcaA1 2564240 - 2565601 + | large terminal subunit of phenylpropionate dioxygenase hcaA2 2565598 - 2566116 + | 3-phenylpropionate dioxygenase subunit beta hcaC 2566116 - 2566436 + | 3-phenylpropionate dioxygenase ferredoxin subunit TERM 3188 2566886 - 2566864 - g 77 -10.4 -3.59262 | overlap 2566865 TTTCACACTGTCAAA TGCCGCCTGG TAT CCTGGCGGCG GTGGCCCGCTGTACA TERM 3189 2566885 - 2566865 - g 85 -13.9 -2.75343 | overlap 2566864 TTCACACTGTCAAAT GCCGCCTGG TAT CCTGGCGGC GGTGGCCCGCTGTAC hcaB 2566433 - 2567245 + | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase TERM 3190 2567583 - 2567602 + F 77 -10.7 -3.40371 | opp_overlap 2567578 2567577 TTATAGCAACCGGCG CGGCAGC TCGACC GCTGCCG TTGCTTGATGCACTG TERM 3191 2567851 - 2567875 + F 78 -12.2 -2.65476 | gap 1, overlap 2567850 ACGCTATCTTTTACA GCGC-CACCAG CAGG CTGGTGTGCGC ATTCTGCTCAATAAT SBO_2567 2568343 - 2568645 + | IS600 ORF1 SBO_2568 2568786 - 2569499 + | IS600 ORF2 yphA 2569786 - 2570253 + | hypothetical protein TERM 3192 2570293 - 2570258 - T 93 -11.8 -3.72695 | opp_overlap 2570260, overlap 2570260 ATCGGCGTTAGGAAA GATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATT TAATAAATTACAGCC TERM 3193 2570260 - 2570291 + T 100 -16.6 -3.794 | opp_overlap 2570260 2570258 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTAATAAATTACAG TERM 3194 2570291 - 2570260 - T 93 -14.4 -3.44848 | opp_overlap 2570260, overlap 2570258 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTAATAAATTACAG yphB 2571173 - 2570301 - | hypothetical protein yphC 2572279 - 2571185 - | putative oxidoreductase TERM 3195 2571930 - 2571920 - G 74 -8.2 -3.93985 | overlap 2571921 ACAAGAGATAGGAAA GCCG CGG CGGC AGTTCGGGCAAAAAC yphD 2573310 - 2572312 - | putative transport system permease protein TERM 3196 2572711 - 2572724 + g 70 -3.7 -4.63527 | opp_overlap 2572711, overlap 2572712 AACGGCAAAAACCGA GCGCC CGAA GGCGG TTTTTCGGCTAATGA yphE 2574846 - 2573335 - | putative ATP-binding component of a transport system TERM 3197 2573799 - 2573812 + g 70 -5.2 -4.41548 | overlap 2573786 ACCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAG yphF 2575714 - 2574869 - | putative LACI-type transcriptional regulator insB 2576404 - 2575901 - | IS1 ORF2 SBO_2576 2576479 - 2576691 + | putative IS1 encoded protein yphG 2580049 - 2576675 - | hypothetical protein TERM 3198 2578352 - 2578364 + g 95 -9.1 -5.06414 | AATCAAACTCGCCTG TCCGC ACT GCGGA TTTTTGTTCAGCGCA yphH 2580068 - 2581267 + | putative NAGC-like transcriptional regulator TERM 3199 2581304 - 2581287 - T 87 -11.3 -4.00066 | opp_overlap 2581287 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT TERM 3200 2581287 - 2581304 + T 100 -11.3 -5.01732 | opp_overlap 2581287 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT glyA 2582584 - 2581331 - | serine hydroxymethyltransferase TERM 3201 2583353 - 2583337 - g 72 -5.7 -4.50661 | opp_overlap 2583339, overlap 2583339 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GTTGGGAAGGTACTC hmpA 2582912 - 2584102 + | nitric oxide dioxygenase glnB 2584485 - 2584147 - | nitrogen regulatory protein P-II 1 yfhA 2585880 - 2584546 - | putative 2-component transcriptional regulator TERM 3202 2585255 - 2585245 - G 72 -8.2 -3.74251 | overlap 2585246 GACAGCGCCAGTAAA CGCG CCA CGCG CATGACCAAACAGCT TERM 3203 2585608 - 2585583 - G 76 -4 -5.01811 | gap 1, overlap 2585584 TGAGGAAACTAAAAA CGCC-CTGCTG TGTTG CAGCAACGGCA TCGGGGATAGAACCA yfhG 2586583 - 2585870 - | hypothetical protein TERM 3204 2586736 - 2586722 - R 72 -2.8 -5.01553 | opp_overlap 2586724, overlap 2586724 AACTGACAAATAAAA TAGCCT GAT AGGATA GGCTGTTAGCATTAT yfhK 2588238 - 2586748 - | putative 2-component sensor protein TERM 3205 2587378 - 2587388 + g 93 -8.2 -4.90266 | overlap 2587363 GCCCTCGCGCATACT CGCC AGT GGCG TTTTTAATTCATGAG TERM 3206 2588263 - 2588233 - G 100 -16.3 -2.91681 | opp_overlap 2588236 2588240, overlap 2588236 2588240 GGGGAAGTTCAGATA CAACAAAGCCGGG AATTA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3207 2588236 - 2588260 + g 100 -15.8 -3.32844 | opp_overlap 2588233 2588236 2588240, overlap 2588240 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3208 2588260 - 2588236 - G 100 -15.8 -3.60412 | opp_overlap 2588236 2588240, overlap 2588233 2588240 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3209 2588256 - 2588240 - R 93 -10.8 -4.42974 | opp_overlap 2588240 2588236, overlap 2588236 2588233 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3210 2588240 - 2588256 + r 90 -10.8 -4.32177 | opp_overlap 2588236 2588233 2588240, overlap 2588236 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3211 2588615 - 2588596 - R 71 -10 -3.15252 | AAATCAATCACTTAA GTGTCGCC AGAA AGCGACAC GGTAAACCACCCATT TERM 3212 2588655 - 2588672 + r 70 -9.1 -3.45737 | opp_overlap 2588655 TACAGACACAAAAAA GCTCCCG GAGT TGGGAGC TTATGATAGTGGTTG TERM 3213 2588672 - 2588655 - R 100 -8.4 -5.4492 | opp_overlap 2588655 TACAGACACAAAAAA GCTCCC GGAGTT GGGAGC TTATGATAGTGGTTG purL 2592620 - 2588733 - | phosphoribosylformylglycinamidine synthase TERM 3214 2591424 - 2591435 + g 74 -2.2 -5.14163 | overlap 2591418 CAGCTCTTCGCCGTT GTGG CTGT TCAC TTTTTCTTCATAAGT TERM 3215 2592736 - 2592725 - H 73 -4.4 -4.86731 | TGCGTGGAAATAAAA TCAC CATC GTGA ATTAGCAACGCGTGC TERM 3216 2592899 - 2592889 - H 75 -2.6 -5.1848 | opp_overlap 2592889 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG yfhD 2593018 - 2594436 + | putative transglycosylase yfhC 2594969 - 2594433 - | tRNA-specific adenosine deaminase yfhB 2595629 - 2594994 - | hypothetical protein TERM 3217 2595260 - 2595245 - G 74 -6.1 -4.46112 | overlap 2595257 GCTTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 3218 2595625 - 2595603 - G 86 -6.2 -5.16572 | overlap 2595606 2595608 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT TERM 3219 2596575 - 2596543 - g 72 -7.7 -3.94877 | ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCTCAGGGAATGTTA yfhH 2595838 - 2596686 + | putative DNA-binding transcriptional regulator yfhL 2596742 - 2597002 + | hypothetical protein TERM 3220 2596999 - 2597029 + T 76 -9.3 -3.71284 | opp_overlap 2596999 2596998 CCACGCGGATAAAAT TTAATATTCTACT CTGGA AGTAGAGTATTAA TTATATTACTGGGAA TERM 3221 2597176 - 2597147 - T 100 -13.6 -3.78022 | opp_overlap 2597147 TTTATAGTTATTAAA GGCGCGTCCGAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT TERM 3222 2597636 - 2597672 + T 95 -10.9 -4.56597 | opp_overlap 2597636, overlap 2597642 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3223 2597672 - 2597636 - T 100 -11.6 -4.83759 | opp_overlap 2597636 2597642 AATTAAAGTTAAAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3224 2597642 - 2597666 + T 73 -4.1 -4.77757 | opp_overlap 2597636, overlap 2597636 AGTTAAAAAGTAAAA CCCCCGTTC CTTACCA GTTCGGGGG TTTTACTTTTTAAAG acpS 2598076 - 2597696 - | 4'-phosphopantetheinyl transferase TERM 3225 2597952 - 2597934 - G 78 -7.4 -4.36914 | opp_overlap 2597934 CGCTTCGCCAGAAAA CGCACC GGCTGGT GGTGCG TTTTCCAGATTGCCC TERM 3226 2597934 - 2597952 + g 74 -8.1 -4.14392 | opp_overlap 2597934 CGCTTCGCCAGAAAA CGCACCG GCTGG TGGTGCG TTTTCCAGATTGCCC pdxJ 2598807 - 2598076 - | pyridoxal phosphate biosynthetic protein PdxJ recO 2599547 - 2598819 - | DNA repair protein RecO TERM 3227 2598970 - 2598980 + g 72 -6.8 -4.21275 | overlap 2598952 2598951 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2600464 - 2599559 - | GTP-binding protein Era TERM 3228 2599903 - 2599893 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC TERM 3229 2600372 - 2600383 + g 70 -5.8 -4.16284 | GGTGATGGAGATCTT CTGC CCCA GCAG TTTGTTCAACAATGT rnc 2601141 - 2600461 - | ribonuclease III TERM 3230 2601400 - 2601368 - R 100 -21.5 -4.07877 | opp_overlap 2601356 TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGGCTATT lepB 2602388 - 2601414 - | lsignal peptidase I TERM 3231 2601950 - 2601966 + g 76 -9.5 -3.76373 | overlap 2601928 GTAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2604203 - 2602404 - | GTP-binding protein LepA TERM 3232 2602502 - 2602515 + g 74 -2.3 -5.07486 | overlap 2602500 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGGCTG TERM 3233 2604408 - 2604391 - R 91 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2604880 - 2604401 - | SoxR reducing system protein RseC rseB 2605833 - 2604877 - | periplasmic negative regulator of sigmaE TERM 3234 2605774 - 2605747 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 2606483 - 2605833 - | anti-RNA polymerase sigma factor SigE TERM 3235 2606209 - 2606221 + g 78 -7.7 -4.43189 | opp_overlap 2606217, overlap 2606217 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTCTGCCATTGAT rpoE 2607091 - 2606516 - | RNA polymerase sigma factor RpoE TERM 3236 2607522 - 2607500 - R 77 -3.5 -5.20222 | opp_overlap 2607521 ATTAAACAAAGAAAA TGAATACTC TCCCT GAACATTCA TGTGACGTGTTGATT TERM 3237 2607646 - 2607666 + r 76 -8.9 -3.73775 | overlap 2607649 TCAACATTTTATGCC CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACTGAC SBO_2603 2608790 - 2608077 - | IS600 ORF2 SBO_2604 2609233 - 2608931 - | IS600 ORF1 TERM 3238 2609997 - 2610015 + r 73 -11 -2.52676 | opp_overlap 2609985 2609983 2609982 2609990 TCACCAGACGTATGC CTGATGCC CAC GGCGTCAG TACGTTACCACCGTG TERM 3239 2610405 - 2610392 - R 75 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA yfiC 2611230 - 2610373 - | putative enzyme TERM 3240 2610489 - 2610463 - G 88 -12.4 -3.58269 | overlap 2610487 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 3241 2611148 - 2611135 - G 77 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 3242 2611679 - 2611668 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT srmB 2611242 - 2612576 + | ATP-dependent RNA helicase SrmB TERM 3243 2612608 - 2612577 - T 85 -12.5 -3.44844 | overlap 2612571 ACGACAGAAGAGTAA TCTTAATTCCGGG TTTAAG CCCGGAATTAAAA GTGCTGGCAAACGCA TERM 3244 2612756 - 2612781 + T 76 -5.3 -4.82901 | overlap 2612759 CTTCGTCGACAAGTT GGGTGCCGGGT TTAA GCCCGGCATTA TTTTTATCCCGGCAA TERM 3245 2612759 - 2612778 + T 95 -11.4 -4.52873 | overlap 2612756 CGTCGACAAGTTGGG TGCCGGGT TTAA GCCCGGCA TTATTTTTATCCCGG yfiE 2613711 - 2612785 - | putative transcriptional regulator LYSR-type TERM 3246 2613252 - 2613235 - G 75 -6.9 -4.4009 | opp_overlap 2613234, overlap 2613238 CCCTACGCGATAAAA GACGCCG ACAT CGGCCTC ATCATTCAGTAGCGC TERM 3247 2613322 - 2613308 - G 70 -7.1 -4.0616 | GACTGCAACGATAAA CGCAC TTTTG GTGCG CGTTGCCGAAAACGC TERM 3248 2613580 - 2613594 + g 70 -5 -4.57569 | AAAAGTCACCGTCGA TTGTGT ACA GCACAA TTTTTGCGAAGCTCG TERM 3249 2613615 - 2613595 - G 82 -11.3 -3.46602 | TTGTGTACAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC SBO_2608 2614658 - 2613753 - | insertion element IS2 transposase InsD SBO_2609 2614981 - 2614616 - | insertion sequence 2 OrfA protein yfiK 2615105 - 2615692 + | neutral amino-acid efflux protein TERM 3250 2615669 - 2615681 + T 72 -4.8 -4.66537 | CTGTTGCTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAACGAA TERM 3251 2615725 - 2615702 - T 100 -16.8 -5.65513 | opp_overlap 2615694 2615702 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 3252 2615702 - 2615725 + T 100 -16.8 -3.22884 | opp_overlap 2615702, overlap 2615694 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC yfiD 2616131 - 2615748 - | autonomous glycyl radical cofactor GrcA TERM 3253 2616275 - 2616259 - H 77 -3.7 -5.24551 | TTAAATCAATAAAAA CCACA CATCGAT TGTGG TCGTAAATGGATTTT TERM 3254 2616898 - 2616915 + G 100 -9.1 -5.18726 | opp_overlap 2616894 2616897 AGCCTGATTAACCAG CACCGCG AAGG CGTGGTG TTTTTGTTGTGGGGA ung 2616436 - 2617125 + | uracil-DNA glycosylase TERM 3255 2617166 - 2617139 - T 90 -13.4 -3.5394 | opp_overlap 2617137 2617140 2617163 2617165, overlap 2617140 AAATTTGCGGGGAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 3256 2617140 - 2617165 + T 88 -14.7 -3.0169 | opp_overlap 2617139 2617140, overlap 2617137 2617163 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 3257 2617165 - 2617140 - T 95 -16.9 -2.72043 | opp_overlap 2617140 2617137 2617163, overlap 2617139 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT yfiF 2618210 - 2617173 - | putative methyltransferase TERM 3258 2618009 - 2617997 - G 71 -9.1 -3.53012 | opp_overlap 2617977 CCGGCGCGCGGGAAA CCGTG CGC CACGG CGAATCTTCCCACTT trxC 2618417 - 2618836 + | thioredoxin 2 TERM 3259 2618843 - 2618863 + F 100 -14.7 -4.50976 | TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 3260 2618876 - 2618886 + F 70 -2.4 -5.02476 | overlap 2618884 CCGTTTTCTCCTCTG CGAC AAT GGCG TTTTTTCGACGCTCT TERM 3261 2618938 - 2618963 + G 70 -3.9 -4.63218 | overlap 2618941 CTCCAGTTACGCGCC GAGCGTATTGC GCGC GCAACACGTCC TTTTCTTGCCCGCGG TERM 3262 2619118 - 2619102 - g 72 -10.1 -3.3782 | opp_overlap 2619101 2619099 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA yfiP 2618881 - 2619603 + | hypothetical protein TERM 3263 2620045 - 2620087 + G 70 -5.5 -4.42806 | overlap 2620030 2620041 CTGGCAAGGTCTGAA TGCCAGCTTTTCGCCTGTG CCGAT TAAACGCGGCAAGCTGGCG TTTATTTCGCAATCG yfiQ 2619635 - 2622295 + | hypothetical protein pssA 2622406 - 2623764 + | phosphatidylserine synthase TERM 3264 2623787 - 2623771 - f 72 -9.4 -3.51032 | opp_overlap 2623771 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 3265 2623771 - 2623787 + F 100 -9.4 -5.04249 | opp_overlap 2623771 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG yfiM 2623861 - 2624133 + | hypothetical protein kgtP 2625428 - 2624130 - | alpha-ketoglutarate transporter TERM 3266 2625682 - 2625670 - R 70 -9.1 -3.4072 | overlap 2625672 TATGTGGGAGTATAA GACGC GCA GCGTC GCATCAGTCATTTTT TERM 3267 2625716 - 2625735 + r 100 -13.6 -3.83214 | opp_overlap 2625716 GCGCCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTTCGCTTAATTTGA TERM 3268 2625735 - 2625716 - R 100 -13.6 -4.74103 | opp_overlap 2625716 GCGCCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTTCGCTTAATTTGA TERM 3269 2625882 - 2625903 + r 74 -8.7 -3.91196 | opp_overlap 2625873 GCAAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 3270 2628371 - 2628383 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3271 2628925 - 2628949 + r 71 -8 -3.93061 | gap 1, opp_overlap 2628931 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 3272 2628988 - 2629025 + r 93 -6.3 -5.68438 | opp_overlap 2628984 2628990, overlap 2628990 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTTC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 3273 2629023 - 2628990 - R 75 -6.7 -4.49756 | opp_overlap 2628990 2628988, overlap 2628984 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 3274 2628990 - 2629023 + r 86 -8.9 -4.47052 | opp_overlap 2628984 2628990, overlap 2628988 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 3275 2631287 - 2631270 - R 74 -3.3 -5.04597 | overlap 2631242 2631271 2631273 ACTTATAGACAAAAA CGAGCCC CGAA GGGCTAA TGCCAGTCAGTTAAG TERM 3276 2631287 - 2631316 + r 89 -9.3 -4.59109 | overlap 2631289 AGCCCCGAAGGGCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3277 2631289 - 2631314 + r 100 -16.3 -3.90762 | overlap 2631287 CCCCGAAGGGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_2625 2631936 - 2631298 - | IS4 orf SBO_2626 2632645 - 2632055 - | IS4 orf TERM 3278 2632635 - 2632660 + g 73 -9.1 -3.61398 | opp_overlap 2632635 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 3279 2632660 - 2632635 - G 100 -9.8 -5.61596 | opp_overlap 2632635 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC clpB 2635308 - 2632735 - | protein disaggregation chaperone TERM 3280 2634504 - 2634484 - G 72 -7.5 -3.86822 | opp_overlap 2634484 TAATTCGTCGATAAA CAGGATGAC GTT GCCTTCCTG TTTGGCAAGATCGTT yfiH 2636169 - 2635438 - | hypothetical protein rluD 2637146 - 2636166 - | 23S rRNA pseudouridine synthase D TERM 3281 2637181 - 2637191 + H 74 -8.2 -3.8766 | ATCGTTGGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC SBO_2630 2637281 - 2638018 + | outer membrane protein assembly complex subunit YfiO TERM 3282 2638107 - 2638132 + F 100 -9.8 -5.61596 | opp_overlap 2638107 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3283 2638132 - 2638107 - f 72 -9.1 -3.61398 | opp_overlap 2638107 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SBO_2631 2638122 - 2639324 + | IS4 orf SBO_2632 2639376 - 2639663 + | IS600 ORF1 SBO_2633 2639818 - 2640531 + | IS600 ORF2 TERM 3284 2640745 - 2640716 - f 89 -9.3 -4.59109 | overlap 2640718 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCCCTTGAGCT TERM 3285 2640743 - 2640718 - f 100 -16.3 -3.90762 | overlap 2640716 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCCCTTGAG SBO_2634 2640754 - 2640960 + | hypothetical protein TERM 3286 2641289 - 2641256 - g 72 -6.7 -4.1822 | gap 1, overlap 2641257 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG yfiA 2640995 - 2641336 + | translation inhibitor protein RaiA TERM 3287 2641362 - 2641377 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC pheL 2641440 - 2641487 + | leader peptide of chorismate mutase-P-prephenate dehydratase TERM 3288 2641536 - 2641556 + F 100 -11.8 -5.5112 | opp_overlap 2641536 2641548 GAAGACGAACAATAA GGCCTCCC AAACC GGGGGGCC TTTTTTATTGATAAC TERM 3289 2641556 - 2641536 - f 87 -10.3 -4.03167 | opp_overlap 2641536, overlap 2641548 GAAGACGAACAATAA GGCCTCCCA AAC CGGGGGGCC TTTTTTATTGATAAC pheA 2641587 - 2642747 + | bifunctional chorismate mutase/prephenate dehydratase TERM 3290 2642752 - 2642785 + T 72 -10.3 -2.83073 | opp_overlap 2642754 2642755, overlap 2642751 2642748 2642755 ATCCAACCTGATGAA AAGGTGCCGGATGAT GTGA ATCATCCGGCACTGG ATTATTACTGGCGGT TERM 3291 2642783 - 2642754 - T 100 -15.1 -4.28361 | opp_overlap 2642752 2642751 2642748 2642755, overlap 2642755 CCAACCTGATGAAAA GGTGCCGGATGAT GTGA ATCATCCGGCACT GGATTATTACTGGCG TERM 3292 2642782 - 2642755 - T 100 -18.6 -3.16534 | opp_overlap 2642755 2642752 2642751 2642748, overlap 2642754 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC TERM 3293 2642755 - 2642782 + T 100 -18.6 -2.67428 | opp_overlap 2642754 2642755, overlap 2642752 2642751 2642748 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC tyrA 2643911 - 2642790 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 3294 2643085 - 2643099 + g 71 -2.8 -4.77165 | GAGAGCGCCAGAAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGA aroF 2644992 - 2643922 - | phospho-2-dehydro-3-deoxyheptonate aldolase yfiL 2645200 - 2645565 + | hypothetical protein SBO_2641 2645715 - 2646233 + | hypothetical protein TERM 3295 2646964 - 2646948 - gT 78 -6.5 -4.64766 | overlap 2646950 TTTACAGGCCAAAAA TGCGCAG CTT CTGCGTA CCGCGCTACATGACC insB 2647551 - 2647048 - | IS1 ORF2 SBO_2642 2646223 - 2647113 + | hypothetical protein SBO_2644 2647626 - 2647859 + | putative IS1 encoded protein TERM 3296 2647888 - 2647918 + T 86 -9.1 -4.45083 | gap 1, opp_overlap 2647852 2647909 TGGGTTCGAACGCTG GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 3297 2648074 - 2648049 - T 100 -9.7 -5.45802 | opp_overlap 2648049 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 2648829 - 2648095 - | phosphoadenosine phosphosulfate reductase cysI 2650616 - 2648904 - | sulfite reductase subunit beta TERM 3298 2649288 - 2649259 - G 75 -7.2 -4.37092 | gap 1 ATGTTGTCGATAAAA GACGGCAGGAAAC GCTCT GCTTCC-GCCATC GCCAGCGGGCAAGTC TERM 3299 2649797 - 2649820 + g 80 -5.2 -4.90079 | gap 1, opp_overlap 2649798, overlap 2649798 2649800 GCGGCAGATAGCCAA ACT-CGCTCGC CGT GCGGGCGTAGG TTTTCTTGTTGCCGT TERM 3300 2649800 - 2649816 + g 75 -11.5 -2.88634 | opp_overlap 2649798, overlap 2649798 2649797 GCAGATAGCCAAACT CGCTCGC CGT GCGGGCG TAGGTTTTCTTGTTG cysJ 2652415 - 2650616 - | sulfite reductase subunit alpha TERM 3301 2652324 - 2652310 - G 70 -7.1 -4.0056 | overlap 2652302 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TAGGCGTTAAATCGG SBO_2648 2653328 - 2652489 - | IS911 ORF2 TERM 3302 2652897 - 2652908 + g 77 -5.8 -4.63218 | opp_overlap 2652893 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 3303 2653249 - 2653269 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 3304 2653894 - 2653914 + H 72 -6.2 -4.21194 | ATTAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA TERM 3305 2654326 - 2654314 - g 72 -4.7 -4.67048 | opp_overlap 2654295 2654314 TGATGGTAAAAGAAA CCTGC ACC GCTGG TTGTATCTATCGCGG ygcM 2653983 - 2654348 + | putative 6-pyruvoyl tetrahydrobiopterin synthase TERM 3306 2654474 - 2654505 + GF 91 -11.5 -4.08689 | overlap 2654475 2654502 GCCGGTATTGCAGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGG TTTATCCGTTTTGTT TERM 3307 2654475 - 2654504 + GF 93 -15 -3.03587 | overlap 2654474 2654502 CCGGTATTGCAGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG GTTTATCCGTTTTGT TERM 3308 2654502 - 2654513 + GF 70 -3.6 -4.71426 | overlap 2654475 2654474 TACGCTGCGCGCGAG CGGG TTTA TCCG TTTTGTTACTGGAAC ygcN 2654426 - 2655694 + | hypothetical protein ygcO 2655649 - 2655945 + | hypothetical protein TERM 3309 2656031 - 2656054 + G 82 -7.4 -4.49906 | opp_overlap 2656018 AATGCCAGCCTGCAA CTGGCAATCG ACTC TGAATGCCAG TTTATTTCCGTGTTG TERM 3310 2656429 - 2656407 - g 70 -4 -4.60797 | opp_overlap 2656410, overlap 2656408 GGGTGACAGAGAAAA TCCGCCAACC GCT GATTGCCGGT GGGCTGGTGTGCGAT ygcP 2655962 - 2656537 + | putative anti-terminator regulatory protein ygcQ 2657578 - 2656685 - | putative flavoprotein ygcR 2658321 - 2657542 - | putative transport protein insB 2658573 - 2659076 + | IS1 ORF2 TERM 3311 2659995 - 2660015 + T 72 -8.5 -3.72893 | opp_overlap 2659962 TTTACAGGTTCCACC CATTTATAA CGC TTATAAATG TTTAATCAGGCAATA ygcF 2660692 - 2660021 - | hypothetical protein TERM 3312 2660544 - 2660533 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 3313 2660636 - 2660623 - G 84 -3.7 -5.24551 | overlap 2660624 GTAAACGAATAAAAA TGGCG GGGA CGCCG GTAAAGTAACCCTCA ygcG 2661153 - 2661857 + | hypothetical protein TERM 3314 2661892 - 2661920 + T 82 -7.4 -4.59109 | overlap 2661894 ATCCCGGAGGCTGTA ATGCCAGTCAGT AAGCA ACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3315 2661894 - 2661918 + T 100 -14.4 -3.90762 | overlap 2661892 CCCGGAGGCTGTAAT GCCAGTCAGT AAGCA ACTGACTGGC TCTTTTTCGGGGCTG SBO_2658 2662540 - 2661899 - | IS4 orf SBO_2659 2663249 - 2662659 - | IS4 orf TERM 3316 2663239 - 2663264 + g 73 -9.1 -3.61398 | opp_overlap 2663239 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 3317 2663264 - 2663239 - G 100 -9.8 -5.61596 | opp_overlap 2663239 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC eno 2664654 - 2663356 - | phosphopyruvate hydratase TERM 3318 2664723 - 2664699 - R 100 -15.1 -4.07562 | opp_overlap 2664697 2664696, overlap 2664702 GAAACTCCAGACAAA CAACACGTACC CAG GGTACGCGTTG CCGTTCTAACTTTTT TERM 3319 2664720 - 2664702 - R 89 -11 -4.15029 | opp_overlap 2664697 2664696, overlap 2664699 ACTCCAGACAAACAA CACGTACC CAG GGTACGCG TTGCCGTTCTAACTT pyrG 2666379 - 2664742 - | CTP synthetase TERM 3320 2666049 - 2666070 + g 90 -11.5 -3.90744 | opp_overlap 2666038 TAACCTGCACGGTTG CGCCGAGGT AGTC ACCGCGGCG TTCTTTACGCAGAAC mazG 2667398 - 2666607 - | nucleoside triphosphate pyrophosphohydrolase TERM 3321 2666936 - 2666948 + g 74 -7.7 -4.11869 | opp_overlap 2666936 TCCAGTCGAAGCCAA CGTTG GCG CAACG TTTCTGGATTTTTTG chpA 2667804 - 2667469 - | toxin ChpA TERM 3322 2667731 - 2667711 - G 74 -9.7 -3.43264 | opp_overlap 2667713, overlap 2667713 AAGGACTCAGGACAA CAGCTGGAC GAT GTCCAGCTT GCTCGCTACCTTTTG TERM 3323 2667713 - 2667729 + g 81 -12.3 -3.19656 | opp_overlap 2667713 2667711 GGACTCAGGACAACA GCTGGAC GAT GTCCAGC TTGCTCGCTACCTTT TERM 3324 2667729 - 2667713 - G 83 -12.3 -3.28447 | opp_overlap 2667713, overlap 2667711 GGACTCAGGACAACA GCTGGAC GAT GTCCAGC TTGCTCGCTACCTTT chpR 2668052 - 2667804 - | antitoxin MazE relA 2670364 - 2668130 - | GDP/GTP pyrophosphokinase rumA 2671713 - 2670412 - | 23S rRNA 5-methyluridine methyltransferase TERM 3325 2672309 - 2672324 + G 72 -5.4 -4.56961 | AGAGATCTTTATTTC CAGCGT GATG ATGCTG TTTTGTATCGGTATT TERM 3326 2672642 - 2672621 - g 70 -4.3 -4.57569 | opp_overlap 2672622, overlap 2672622 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 3327 2673747 - 2673734 - g 71 -2.3 -5.02323 | overlap 2673729 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGTA barA 2671770 - 2674526 + | hybrid sensory histidine kinase BarA TERM 3328 2674723 - 2674742 + T 100 -10.7 -4.75518 | AGCATCAGTCTCAAG CCGGCTC CAGATA GAGCCGG TTTTGGTTTTCTGTC ygcX 2676098 - 2674758 - | putative glucarate dehydratase TERM 3329 2675577 - 2675601 + g 70 -10.7 -2.83403 | opp_overlap 2675580, overlap 2675576 ATGACGCAGGCGATA CCAGTCGCATG AGT CATCCGGCTGG CTTTGATACGGCAGC ygcY 2677459 - 2676119 - | putative glucarate dehydratase SBO_2670 2678768 - 2677461 - | putative transport protein TERM 3330 2678969 - 2678951 - R 76 -4.4 -4.93898 | overlap 2678914 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA SBO_2671 2679682 - 2679233 - | flavodoxin yqcB 2680482 - 2679700 - | tRNA pseudouridine synthase C SBO_2673 2680811 - 2680482 - | hypothetical protein TERM 3331 2680889 - 2680864 - R 100 -15.5 -5.84381 | opp_overlap 2680863 2680862 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGCGCTCCC GGTTCGTTTCGCAGC syd 2681978 - 2681433 - | SecY interacting protein Syd TERM 3332 2681881 - 2681858 - G 74 -8.9 -3.9392 | opp_overlap 2681858 2681857 2681869 CGGTAGTTGAAATAA TGCACGGTG AAGGAA CACCGTACA GTTCCTCACTTAACG TERM 3333 2682748 - 2682726 - g 71 -10.6 -2.86271 | opp_overlap 2682724 2682738 2682739, overlap 2682723 2682738 CCGTCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 2682046 - 2682894 + | 7-cyano-7-deazaguanine reductase TERM 3334 2684039 - 2684022 - g 73 -4.1 -4.86731 | gap 1, overlap 2684003 GCTGGTGAAAGAAAA TCGCC-GC GAC ACAGGCGA TGCCTACAGCTTTAA ygdH 2683006 - 2684370 + | hypothetical protein TERM 3335 2684381 - 2684402 + F 93 -10.1 -4.72556 | overlap 2684399 CGTAATCTCCCCTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG TERM 3336 2684399 - 2684410 + F 71 -3.6 -4.77157 | overlap 2684381 GGTGACGTTTGTTGC CGGG TTTT CTCG TTTTTGGTCACTTAC TERM 3337 2684656 - 2684681 + F 76 -8.5 -4.06527 | gap 1, overlap 2684662 AGAAGTCAGATGTCG TTTAATGGGCAA ATA TTGCCC-TTAAA TTCTCTTTTACTTTT TERM 3338 2684662 - 2684676 + F 73 -10 -3.32941 | overlap 2684656 CAGATGTCGTTTAAT GGGCAA ATA TTGCCC TTAAATTCTCTTTTA sdaC 2684927 - 2686216 + | serine transporter TERM 3339 2686225 - 2686244 + F 81 -12.8 -3.27786 | overlap 2686237 2686239 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 3340 2687051 - 2687031 - g 72 -5.3 -4.4767 | opp_overlap 2687031 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA sdaB 2686274 - 2687641 + | L-serine dehydratase TERM 3341 2687654 - 2687672 + F 80 -12.4 -3.08774 | overlap 2687646 TAATCGCTCTCCAGA GGCCTCGT TTT GCGAGGCC TCTTCCCGATTTCTC TERM 3342 2687922 - 2687911 - g 75 -7.2 -4.30576 | overlap 2687913 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG xni 2687663 - 2688508 + | exonuclease IX TERM 3343 2688561 - 2688595 + T 86 -12.9 -3.32844 | opp_overlap 2688563 2688571 TTTAATGCACTTATA TACCGGATAAGACGC GGCTA GCGTCGTATCCGGCA TTATCACATCAGCGC TERM 3344 2688593 - 2688563 - T 93 -15.5 -2.92389 | opp_overlap 2688561, overlap 2688571 TAATGCACTTATATA CCGGATAAGACGC GGCTA GCGTCGTATCCGG CATTATCACATCAGC fucA 2690425 - 2689778 - | L-fuculose phosphate aldolase SBO_2682 2690669 - 2690493 - | putative IS1 encoded protein insB 2690762 - 2691265 + | IS1 ORF2 TERM 3345 2692375 - 2692364 - g 93 -2.2 -5.63103 | CTGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC TERM 3346 2693080 - 2693064 - g 71 -3 -4.82901 | gap 1, overlap 2693066 CTGGGCTGATAAAAA CTTCCGC TATG GCG-AAG ATGAAAATAACAAAC fucI 2692354 - 2694099 + | L-fucose isomerase fucU 2695516 - 2695938 + | protein of fucose operon TERM 3347 2695934 - 2695924 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATACCGG TERM 3348 2695951 - 2695971 + F 73 -9.6 -3.34043 | overlap 2695952 TAATCTCATACCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 3349 2695952 - 2695970 + F 81 -13.1 -2.60212 | overlap 2695951 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 3350 2696244 - 2696262 + G 72 -11.6 -2.52464 | opp_overlap 2696243 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 2695996 - 2696727 + | DNA-binding transcriptional activator FucR ygdE 2697871 - 2696771 - | putative RNA 2'-O-ribose methyltransferase ygdD 2698259 - 2697864 - | hypothetical protein TERM 3351 2698232 - 2698218 - G 74 -8.5 -3.88603 | AGCCACAAAAATGAA GCCGC TAATG GCGGC GAAAATCAGCATAAA gcvA 2699195 - 2698278 - | DNA-binding transcriptional activator GcvA TERM 3352 2699437 - 2699451 + r 100 -10 -5.17576 | opp_overlap 2699436 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 3353 2699502 - 2699521 + r 100 -10.7 -5.86332 | opp_overlap 2699502 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC TERM 3354 2699521 - 2699502 - R 70 -10.7 -2.57423 | opp_overlap 2699502 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC SBO_2692 2699776 - 2699546 - | hypothetical protein SBO_2693 2699965 - 2701170 + | cysteine sulfinate desulfinase ygdK 2701170 - 2701613 + | hypothetical protein TERM 3355 2701659 - 2701622 - T 100 -17.1 -3.59946 | opp_overlap 2701622 2701623 2701625, overlap 2701623 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTAACCCTGAC TERM 3356 2701622 - 2701659 + T 95 -12.7 -3.92542 | opp_overlap 2701622 2701623, overlap 2701623 2701625 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTAACCCTGAC TERM 3357 2701623 - 2701658 + T 93 -16.2 -2.95204 | opp_overlap 2701622 2701623, overlap 2701622 2701625 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTAACCCTGA TERM 3358 2701658 - 2701623 - T 100 -18.4 -2.75647 | opp_overlap 2701623 2701622 2701625, overlap 2701622 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTAACCCTGA TERM 3359 2701625 - 2701656 + T 82 -13 -3.02639 | opp_overlap 2701623 2701622, overlap 2701623 2701622 TTAAGCACAGAACCA GGTCGGATAAGACG TTCG CGTCGCATCCGACC TGATTGTTTAACCCT ygdL 2702470 - 2701664 - | putative enzyme TERM 3360 2702490 - 2702510 + r 79 -12.6 -2.8655 | opp_overlap 2702490 CCTCAGAATTAAAAA GGGTGAGG TTATC CCTCACCC TGTCGTATCCGTAAA TERM 3361 2702510 - 2702490 - R 100 -12.6 -4.93365 | opp_overlap 2702490 CCTCAGAATTAAAAA GGGTGAGG TTATC CCTCACCC TGTCGTATCCGTAAA mltA 2703644 - 2702547 - | murein transglycosylase A TERM 3362 2704169 - 2704193 + r 100 -11.5 -5.88197 | opp_overlap 2704169 TAGAATGCTGATAAA CCGCAATGTGT TCC ACAAATTGCGG TTTTTTTGTATTTAA TERM 3363 2704193 - 2704169 - R 87 -11.5 -3.90328 | opp_overlap 2704169 TAGAATGCTGATAAA CCGCAATGTGT TCC ACAAATTGCGG TTTTTTTGTATTTAA SBO_2700 2705174 - 2704227 - | putative phosphoglycerate dehydrogenase TERM 3364 2704321 - 2704335 + g 73 -11.4 -2.68304 | overlap 2704320 GACTCAACGGTGGCG GCCGCA ATA TGCGGC GTTGTAATGATATTT TERM 3365 2704631 - 2704649 + g 78 -9.6 -3.9712 | opp_overlap 2704634, overlap 2704634 CTCCAACTTTGTCAG CAACCTGA TAA TCGGGTTG TTTGTCATAAGCTAA insB 2705915 - 2705412 - | IS1 ORF2 SBO_2702 2705990 - 2706172 + | putative IS1 encoded protein SBO_2703 2706619 - 2706143 - | putative isomerase TERM 3366 2706443 - 2706460 + gT 75 -9.9 -3.53091 | TGTTGCAGCAAGTTT TCTGGCA ATAA TGCCAGA TTTCCCAACACCAAT SBO_2704 2707796 - 2706588 - | cystathionine beta-lyase SBO_2706 2710055 - 2709408 - | hypothetical protein TERM 3367 2710250 - 2710301 + r 75 -9.6 -3.60792 | gap 1, opp_overlap 2710253, overlap 2710253 ATGGGTCCCCAAAAA AAAGGCAAGGC-ATGTCAGAAGTAA TAA TTACTTCAAACATTGCCTTGCCTGA TTTAACAGTTGCAAG TERM 3368 2710253 - 2710298 + r 93 -15.7 -2.92667 | gap 1, opp_overlap 2710253, overlap 2710250 GGTCCCCAAAAAAAA GGCAAGGC-ATGTCAGAAGTAA TAA TTACTTCAAACATTGCCTTGCC TGATTTAACAGTTGC TERM 3369 2710298 - 2710253 - R 100 -17.9 -5.75342 | gap 1, opp_overlap 2710253 2710250 GGTCCCCAAAAAAAA GGCAAGGCA-TGTCAGAAGTAA TAA TTACTTCAAACATTGCCTTGCC TGATTTAACAGTTGC TERM 3370 2710481 - 2710449 - R 75 -9.5 -3.57185 | opp_overlap 2710440 2710453, overlap 2710447 TTTATGTAAATAATA TTTATTCAATGAA ACATAAA TTCATTGAATAAA TTAAAAACATCATCC SBO_2707 2711834 - 2710491 - | putative amidase TERM 3371 2710803 - 2710813 + g 78 -8.2 -4.25104 | opp_overlap 2710803 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTCACGCCAC TERM 3372 2711084 - 2711108 + g 70 -3.5 -4.61527 | TCAGAGAGCGCAGAC GGCGAGCTATT TGC AATACCACGTC TTTTTCGCGCGTTTT TERM 3373 2713268 - 2713253 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 2711976 - 2713307 + | N-acetylglutamate synthase TERM 3374 2713318 - 2713362 + T 77 -10.2 -3.37761 | gap 2, opp_overlap 2713318, overlap 2713312 GGTAAGCGATGAAAA TTGTCGGATGCGA--CATGCGT AAC ACTCGTGCATCGCATCCGGCAA TTACGTTTATTCCCG TERM 3375 2713362 - 2713318 - T 74 -7.1 -4.30978 | opp_overlap 2713318 2713312 GGTAAGCGATGAAAA TTGTCGGATGCGACATGCG TAACACT CGTGCATCGCATCCGGCAA TTACGTTTATTCCCG RecD 2715195 - 2713369 - | exonuclease V subunit alpha TERM 3376 2714107 - 2714123 + g 79 -4.3 -5.00616 | opp_overlap 2714105 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 3377 2714899 - 2714877 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCGCC ACA GAGGATCATC GGCGTGGGTTCATCT RecB 2718737 - 2715195 - | exonuclease V subunit beta TERM 3378 2716356 - 2716381 + g 85 -8.3 -4.56775 | gap 1, overlap 2716357 CAGATCTTCCGCCAG ACGTTCGACCTC CGC GAGGTCG-ACGC TTTTTGGCGCAGCAT TERM 3379 2716357 - 2716380 + g 80 -11.8 -3.33744 | gap 1, overlap 2716356 AGATCTTCCGCCAGA CGTTCGACCTC CGC GAGGTCG-ACG CTTTTTGGCGCAGCA TERM 3380 2717696 - 2717708 + g 74 -6.2 -4.57569 | overlap 2717695 2717703 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 3381 2717884 - 2717863 - G 70 -5.8 -4.16016 | opp_overlap 2717833 CGATCTTCTAAGAAA CGCTGGGA GAATTT TTCCAGCG ACTCCGGCAACTGAT TERM 3382 2718605 - 2718591 - G 71 -9.2 -3.53224 | CAGCGGGCGGGGAAA GGCGGC GGA ACCGCC TAGTCCAAGTAACAG TERM 3383 2718706 - 2718680 - G 70 -10.8 -2.72049 | CAGAGGCTTCAATCA GGCGCTCACCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptr 2721618 - 2718730 - | protease III TERM 3384 2719354 - 2719371 + g 72 -5.5 -4.58395 | CGCTGCCAGTGCGGA GTCGGTG CTGT TACCGGC TTTTTCAAAGATGAC TERM 3385 2720156 - 2720177 + g 81 -8.8 -4.3898 | overlap 2720144 2720143 GCTTTTTGCTGCCAG TCAGCGAA AGTTTG TTCGCTGA TTTTATCGACCTGAT TERM 3386 2720804 - 2720832 + g 84 -3.7 -5.28755 | overlap 2720799 2720805 2720812 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT TERM 3387 2721250 - 2721236 - G 70 -7.1 -4.128 | ACTTCCAGATAGAAA GCCGT GCGAT ACGGC GCAGTGCTGGCATTG recC 2725162 - 2721794 - | exonuclease V subunit gamma TERM 3388 2722183 - 2722171 - G 78 -5.5 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCACC ATTACCACCGCTGGC ppdC 2725498 - 2725175 - | hypothetical protein ygdB 2725890 - 2725483 - | hypothetical protein TERM 3389 2725545 - 2725526 - G 71 -2.8 -4.85599 | gap 1 TTCAGCGGACAAAAA TCGCTCCAG CCG CTTG-GCGA AAAAACAATGTTTCC TERM 3390 2725682 - 2725712 + g 85 -8.2 -4.56597 | opp_overlap 2725686 GCGTACTGCGAGCAC TGAACTGCTGGCTG CGT CTGCCAGGAGTGCA TTTTTCCCCACGCCA SBO_2715 2726702 - 2727052 + | putative protein encoded within IS TERM 3391 2727087 - 2727056 - f 72 -5.2 -4.60255 | gap 1, overlap 2727057 2727058 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 3392 2727086 - 2727058 - f 71 -10.3 -2.60776 | overlap 2727056 2727057 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_2716 2727272 - 2728675 + | putative protein encoded within IS TERM 3393 2728704 - 2728673 - T 76 -7.5 -4.258 | gap 2, opp_overlap 2728676 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CTGATACAGTCACCC ppdA 2729425 - 2728955 - | hypothetical protein TERM 3394 2729588 - 2729569 - R 100 -10.7 -5.78622 | GGAGGGTAAAAAAAA CCGACGC ACACTA GCGTCGG CTCTGGCAGGATGTT thyA 2730404 - 2729610 - | thymidylate synthase TERM 3395 2730025 - 2730042 + g 72 -4.7 -4.64598 | GCTGAAACAATAATG CGGCGCG AATC CGGGTCG TTTTTCAGCTGGTTC TERM 3396 2730277 - 2730247 - G 72 -11.1 -3.10164 | TCATGGATGATGGAA CGCAGGTGGCAAC GTTTA GTTGTCACCAGCG GGAATCCATCCTGCA lgt 2731286 - 2730411 - | prolipoprotein diacylglyceryl transferase ptsP 2733683 - 2731437 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 3397 2732989 - 2733029 + g 81 -10.6 -3.61398 | gap 2, opp_overlap 2732965 2732997 TCTTTTTGTGCTCCG GCGGCAAA-GCGTTT-GCTG TAG CGGCGAAACTCGTTTGCCGC TTCTTCCAGCGCCCC ygdP 2734226 - 2733696 - | dinucleoside polyphosphate hydrolase TERM 3398 2735164 - 2735149 - g 76 -7.6 -4.27316 | opp_overlap 2735149 2735147 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCGCT TERM 3399 2735528 - 2735540 + G 85 -6.9 -4.86731 | CGAACGGATTCTGAC GCTGC CAC GCGGC TTTTATTTGAAGAAG mutH 2734911 - 2735600 + | DNA mismatch repair protein SBO_2724 2735669 - 2736382 + | putative transport protein SBO_2725 2736520 - 2736738 + | hypothetical protein TERM 3400 2736767 - 2736743 - f 79 -8.6 -4.20918 | opp_overlap 2736742 2736741, overlap 2736746 TTGAACGTTAACAAA TAAGGTCAGC ATCCG GCTGGCCTTA AGATTTTTCTCTTTC TERM 3401 2737672 - 2737662 - g 93 -8.2 -4.82855 | opp_overlap 2737661 2737659, overlap 2737664 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATCGC SBO_2726 2736846 - 2737886 + | putative aldo-keto reductase TERM 3402 2737888 - 2737915 + T 81 -12.8 -3.13403 | opp_overlap 2737889 2737893 2737905, overlap 2737893 ATCCGGCACCATAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC TERM 3403 2737914 - 2737889 - T 100 -16.3 -3.27475 | opp_overlap 2737888 2737893, overlap 2737893 2737905 TCCGGCACCATAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 3404 2737910 - 2737893 - T 85 -12.7 -3.43203 | opp_overlap 2737893 2737888, overlap 2737889 2737905 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 3405 2737893 - 2737910 + T 81 -12.7 -3.20348 | opp_overlap 2737889 2737893 2737905, overlap 2737888 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 3406 2737952 - 2737922 - T 70 -9 -3.45571 | opp_overlap 2737925, overlap 2737905 2737916 2737925 GGCGTTAAATATTAA TGACGGCGCTGC CAGATCC ACAGCGCCGTTA TTGCCAGCGCAAACA TERM 3407 2737925 - 2737949 + T 75 -10 -3.61398 | opp_overlap 2737905 2737922 2737916 2737925 GTTAAATATTAATGA CGGCGCTG CCAGATCCA CAGCGCCG TTATTGCCAGCGCAA TERM 3408 2737949 - 2737925 - T 72 -10.7 -2.8742 | opp_overlap 2737925, overlap 2737905 2737922 2737916 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG TTATTGCCAGCGCAA ygeD 2739111 - 2737918 - | hypothetical protein TERM 3409 2738448 - 2738435 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 2741263 - 2739104 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 3410 2741376 - 2741359 - H 100 -12.7 -5.75945 | opp_overlap 2741359 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3411 2741359 - 2741376 + H 81 -12.7 -3.14132 | opp_overlap 2741359 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA galR 2741652 - 2742683 + | DNA-binding transcriptional regulator GalR lysA 2743952 - 2742690 - | diaminopimelate decarboxylase lysR 2744074 - 2745009 + | DNA-binding transcriptional regulator LysR ygeA 2745688 - 2744996 - | putative racemase TERM 3412 2745810 - 2745784 - R 100 -18.8 -5.30155 | CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGATGCC TERM 3413 2747023 - 2747002 - R 71 -7.9 -3.84961 | overlap 2747014 CAGCCAACCATTAAA CAGCGCACC AATT GCTGCGCCG AGCATCATGCTACTA TERM 3414 2747289 - 2747271 - R 82 -6 -5.14477 | overlap 2747273 GACATAGTGAAAAAA TACGTGAA CAA CTCACGCA GGTGTCAGGTCGGAA TERM 3415 2747524 - 2747507 - R 100 -12.7 -5.29782 | TACAGGTATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAA kduD 2748308 - 2747547 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 3416 2748151 - 2748136 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTCGATGG kduI 2749174 - 2748338 - | 5-keto-4-deoxyuronate isomerase TERM 3417 2749220 - 2749234 + r 72 -5 -4.60797 | overlap 2749217 2749221 AATAGAAAACGATAG TGAAAC ACT GTTTCG TTTTCTCTATAAAGG TERM 3418 2749287 - 2749301 + r 78 -5.8 -4.74103 | opp_overlap 2749287 GTTTTCAATTAAAAA TAAAAC AAT GTTTTA TTTTTAAGTTAAGGA TERM 3419 2749301 - 2749287 - R 78 -5.8 -4.8622 | opp_overlap 2749287 GTTTTCAATTAAAAA TAAAAC AAT GTTTTA TTTTTAAGTTAAGGA yqeF 2750642 - 2749461 - | acetyl-CoA acetyltransferase TERM 3420 2750729 - 2750716 - R 84 -5.3 -5.41746 | AATTGTTTAAAAAAA GTGAT TTTT ATCAC AAAAGAAATATGCCT TERM 3421 2750938 - 2750921 - R 74 -8.5 -3.90922 | ATTTGGTCTAAAGAA GAAACTC TGTG GAGTTTC GCGCTCTACGGCACA insB 2751815 - 2751312 - | IS1 ORF2 SBO_2739 2751908 - 2752120 + | putative IS1 encoded protein SBO_2740 2752179 - 2752490 + | hypothetical protein yfiB 2752506 - 2752988 + | putative outer membrane lipoprotein TERM 3422 2753034 - 2753013 - T 100 -11.5 -5.82281 | opp_overlap 2753013 2753031 2753033 AAACAGACAAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 2753412 - 2753065 - | 50S ribosomal protein L19 trmD 2754221 - 2753454 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2754800 - 2754252 - | 16S rRNA-processing protein rpsP 2755067 - 2754819 - | 30S ribosomal protein S16 TERM 3423 2755123 - 2755091 - R 89 -9.2 -4.63218 | gap 1, opp_overlap 2755094, overlap 2755094 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 3424 2755121 - 2755094 - R 100 -12 -4.43307 | opp_overlap 2755094, overlap 2755091 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 2756565 - 2755204 - | signal recognition particle protein TERM 3425 2756826 - 2756812 - g 85 -2.7 -5.40072 | overlap 2756814 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC SBO_2747 2756657 - 2757523 + | hypothetical protein yfjD 2757634 - 2758830 + | hypothetical protein TERM 3426 2758833 - 2758866 + T 75 -9.5 -3.61398 | opp_overlap 2758837, overlap 2758834 2758837 TGTGGCGGAGTAACG AAAACGGCCCTGCAT TCGC ATGCAGGGCCGTGAA TTATTACGAAAACAG TERM 3427 2758834 - 2758865 + T 82 -13 -2.76696 | opp_overlap 2758837, overlap 2758833 2758837 GTGGCGGAGTAACGA AAACGGCCCTGCAT TCGC ATGCAGGGCCGTGA ATTATTACGAAAACA TERM 3428 2758862 - 2758837 - T 100 -19.1 -4.45544 | opp_overlap 2758834 2758833 2758837 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA TERM 3429 2758837 - 2758862 + T 100 -19.1 -2.6563 | opp_overlap 2758837, overlap 2758834 2758833 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA grpE 2759478 - 2758885 - | heat shock protein GrpE ppnK 2759601 - 2760479 + | inorganic polyphosphate/ATP-NAD kinase recN 2760565 - 2762226 + | recombination and repair protein smpA 2762564 - 2762716 + | small membrane protein A TERM 3430 2762736 - 2762775 + T 93 -12.4 -3.70444 | gap 1, opp_overlap 2762748, overlap 2762748 AAAGTTGCTCTCAAA GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC TGTTATTTATTCGCT TERM 3431 2762764 - 2762748 - T 100 -12.3 -5.10077 | opp_overlap 2762736 2762748 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT TERM 3432 2762748 - 2762764 + T 100 -12.3 -5.46276 | opp_overlap 2762748, overlap 2762736 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT SBO_2753 2763068 - 2762778 - | hypothetical protein TERM 3433 2762894 - 2762912 + g 74 -3 -4.96773 | overlap 2762896 CGCTTAGTTTTGCCG GACGGC TGTAAAT GCCGAC TTTGTTTTTAGTTAA SBO_2754 2763534 - 2763058 - | hypothetical protein TERM 3434 2764057 - 2764045 - g 70 -5.5 -4.35524 | GGTGCAAAGTGAAAA TCGGC GTC GCCAA AGGTAAAAAACAGCA smpB 2763666 - 2764148 + | SsrA-binding protein TERM 3435 2764462 - 2764447 - T 72 -3.2 -5.08011 | overlap 2764449 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 3436 2764842 - 2764829 - T 72 -8.1 -3.75832 | AAAAGGATACGCAAA GGAGC CGCG GCTCC TGGTGACATGAAAGC TERM 3437 2764871 - 2764856 - T 83 -10.4 -3.83026 | opp_overlap 2764856 CCTGGTGACATGAAA GCCCAC AGAT GTGGGC TTTTTCGTTGATGGT TERM 3438 2764856 - 2764871 + T 100 -10.4 -4.90869 | opp_overlap 2764856 CCTGGTGACATGAAA GCCCAC AGAT GTGGGC TTTTTCGTTGATGGT insB 2767714 - 2767211 - | IS1 ORF2 SBO_2758 2767789 - 2767971 + | putative IS1 encoded protein ygcB 2768114 - 2769523 + | putative helicase TERM 3439 2769587 - 2769600 + F 74 -3.8 -5.00616 | GAAGGATGGACAACC GACC TGGGAT GGTC TTTTTTACGAGAGGA TERM 3440 2770065 - 2770077 + G 74 -2.6 -5.09225 | overlap 2770058 CTGTGCCTGCATTGT GTGC CTTTA GCGC TTTTTTCAATCCAGT TERM 3441 2770439 - 2770449 + G 72 -6.8 -4.21098 | overlap 2770446 CATTTGCGGTAGGCA GAGC GAT GCTC TTTTGGGCTTGATGT SBO_2760 2769621 - 2771183 + | putative cytoplasmic protein TERM 3442 2771176 - 2771165 - f 78 -5.8 -4.87665 | CGCCAGGGAGAAAAA GCAG GAGG CTGC TGAATGAGTATTGTA SBO_2761 2771180 - 2771749 + | hypothetical protein yghJ 2771777 - 2772514 + | putative cytoplasmic protein TERM 3443 2772620 - 2772606 - f 71 -3.5 -4.88405 | overlap 2772601 AACCGGTAAACAAAA CAGCT TTGCC AGCCG GGCTTATGCCTCCTG SBO_2763 2772866 - 2773612 + | putative cytoplasmic protein SBO_2764 2773594 - 2774244 + | hypothetical protein SBO_2765 2774241 - 2775161 + | hypothetical protein ygbF 2775161 - 2775454 + | hypothetical protein iap 2776698 - 2775661 - | alkaline phosphatase isozyme conversion aminopeptidase TERM 3444 2776798 - 2776810 + H 76 -4.8 -4.88228 | opp_overlap 2776786 AACGCCCGAAATCCG GTGC CTTAA GCAC TTTTTGATATTAGCT cysD 2776950 - 2777858 + | sulfate adenylyltransferase subunit 2 TERM 3445 2778724 - 2778740 + G 72 -5.8 -4.32034 | opp_overlap 2778724 GGTGTGGAATCAAAC GTCGCG CGGAT CGTGAC TTTTGATGGTGATCG cysN 2777860 - 2779287 + | sulfate adenylyltransferase subunit 1 TERM 3446 2779347 - 2779377 + G 79 -12.6 -3.00525 | opp_overlap 2779345 2779344, overlap 2779341 2779350 ACTGTGCAACAACGC GAGCTACACCACGG TCA TCGTGGTGTAGTGC TGTGGTTTACCGGCC TERM 3447 2779350 - 2779374 + G 90 -15.1 -2.7314 | opp_overlap 2779345 2779344, overlap 2779347 2779341 GTGCAACAACGCGAG CTACACCACGG TCA TCGTGGTGTAG TGCTGTGGTTTACCG cysC 2779287 - 2779892 + | adenylylsulfate kinase ygbE 2779942 - 2780265 + | hypothetical protein TERM 3448 2780376 - 2780354 - f 74 -11.4 -2.82142 | opp_overlap 2780352, overlap 2780353 GGTATACGTAACAAT GGACAAATGT GGT ACATTTGCCC GCGTTGTCGCGGTAT ftsB 2780459 - 2780770 + | cell division protein FtsB TERM 3449 2780824 - 2780836 + G 73 -9.1 -3.57462 | TGTTTGCGCCGTGGT TCCGG CGG CCGGA TTTGGCCGTCGAATG ispD 2780789 - 2781499 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 2781499 - 2781978 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase truD 2781975 - 2783024 + | tRNA pseudouridine synthase D surE 2783005 - 2783766 + | stationary phase survival protein SurE TERM 3450 2784247 - 2784221 - g 70 -10.9 -2.72511 | overlap 2784220 GGCACCGCCGGAAAT TCCAACTGCGC TAATG ACGCAGCTGGA CGAAGGCGGGATTCT pcm 2783760 - 2784386 + | protein-L-isoaspartate O-methyltransferase TERM 3451 2784557 - 2784569 + G 86 -10.5 -3.96224 | CAAAATTCACCGTTC GCCGC ATT GCGGC TTTGTCACTGGTTTC TERM 3452 2784882 - 2784859 - g 83 -5.3 -5.04385 | TATACCGTGAAAAAA GGCGACACA CTTTTC TATATCGCC TGGATTACTGGCAAC TERM 3453 2785153 - 2785139 - g 72 -5 -4.65078 | AGAGTGCTAACAAAA TGTTGC CGA ACAACA AGCCAGCTGCGACCA TERM 3454 2785356 - 2785375 + G 70 -7 -4.07133 | opp_overlap 2785355 AGGACAGGCAATTAT CGCGACCG CAGA TGGCCGCG TTGTTTATGCCGGTA nlpD 2784526 - 2785617 + | lipoprotein NlpD rpoS 2785680 - 2786675 + | RNA polymerase sigma factor RpoS TERM 3455 2786694 - 2786717 + T 100 -14.6 -4.52857 | opp_overlap 2786694 AGCATCTGTCAGAAA GGCCAGTCTC AAGC GAGGCTGGCC TTTTCTGTGCACAAT TERM 3456 2786717 - 2786694 - T 95 -12.4 -3.87075 | opp_overlap 2786694 AGCATCTGTCAGAAA GGCCAGTCTC AAGC GAGGCTGGCC TTTTCTGTGCACAAT TERM 3457 2786761 - 2786732 - T 81 -12.3 -3.28712 | opp_overlap 2786737, overlap 2786737 CTTTTCTGTGCACAA TAAAAGGTCCGAT GCCC ATCGGACCTTTTT ATTAAGGTCAAATTA TERM 3458 2786756 - 2786737 - T 100 -12.2 -4.77165 | opp_overlap 2786737, overlap 2786732 CTGTGCACAATAAAA GGTCCGAT GCCC ATCGGACC TTTTTATTAAGGTCA TERM 3459 2786737 - 2786756 + T 100 -12.2 -5.08601 | opp_overlap 2786732 2786737 CTGTGCACAATAAAA GGTCCGAT GCCC ATCGGACC TTTTTATTAAGGTCA SBO_2780 2788133 - 2786769 - | inner membrane permease YgbN TERM 3460 2788184 - 2788167 - R 73 -11.3 -2.56095 | opp_overlap 2788164, overlap 2788163 GTTATAGTTAACCTA CCCCATC CGTA GATGGGG GGATGTATGGGTACG ygbM 2788998 - 2788222 - | hypothetical protein ygbL 2789641 - 2789003 - | putative aldolase SBO_2783 2790900 - 2789638 - | hypothetical protein TERM 3461 2789846 - 2789836 - G 75 -6.8 -4.30719 | GCCTGCGACAATAAA GCGT GTC ACGC CTTCCGCTGCTAACC SBO_2784 2791805 - 2790897 - | putative dehydrogenase TERM 3462 2792488 - 2792506 + G 93 -8.9 -5.0065 | CGACCATGCTGCGCA GCCTGAT GATTG ATCAGGC TTTTATTTCTGCATC ygbI 2791971 - 2792768 + | putative DEOR-type transcriptional regulator pphB 2793475 - 2792819 - | serine/threonine-specific protein phosphatase 2 TERM 3463 2793481 - 2793516 + r 86 -4 -5.62288 | overlap 2793482 2793483 TAGATGGCATGGTTT TACCCTGTAAAATAAG CTTT CCTATTATACAGGGGG TTTTTATTTTATTCG TERM 3464 2793574 - 2793548 - R 78 -11.7 -3.01924 | opp_overlap 2793548 CAGTTGTCGTTAATA TTCCCGATAGC AAAAG ACTATCGGGAA TTGTTATTACACCAG TERM 3465 2793548 - 2793574 + r 87 -11 -3.9461 | opp_overlap 2793548 CAGTTGTCGTTAATA TTCCCGATAG CAAAAGA CTATCGGGAA TTGTTATTACACCAG mutS 2796142 - 2793581 - | DNA mismatch repair protein TERM 3466 2793619 - 2793650 + g 74 -8 -4.09739 | gap 1 AAATCCATTCCAGCG CCT-GACGCGGAGTC AGT GAATCCGGGTCCAGG TTTTCCAGAGCTTCG TERM 3467 2794550 - 2794567 + g 70 -4.1 -4.62069 | opp_overlap 2794552 CAACAGCAGGTCGAA CAGCTCT TCAT AAAGCTG TTTTTCCAGTGCCAG TERM 3468 2795557 - 2795569 + g 72 -10.5 -3.05463 | GCGGGCGACGGCGCA GGCCG CGA CGGCC TTCAATCAGCGACAT TERM 3469 2796100 - 2796056 - G 77 -8.6 -4.09864 | opp_overlap 2796065 ACCCATCCGGTAAAA CAGCAGGATCTCGGGATG CTGGGCTTT CAGCCTGAGATACTGCTG CATCATGGGCGTATG ygbA 2796429 - 2796782 + | hypothetical protein TERM 3470 2796784 - 2796811 + T 93 -12 -3.6715 | opp_overlap 2796782 2796785, overlap 2796783 2796785 2796806 AACCTCGTGAATAGT ATGCCGGACAGG CAGA TCTGTCCGGCAA TTTGCAGTTAAATCA TERM 3471 2796810 - 2796785 - T 86 -14.8 -2.73994 | opp_overlap 2796783 2796784 2796785 2796806, overlap 2796782 ACCTCGTGAATAGTA TGCCGGACAG GCAGAT CTGTCCGGCA ATTTGCAGTTAAATC TERM 3472 2796785 - 2796810 + T 93 -15.5 -2.79968 | opp_overlap 2796785 2796782, overlap 2796783 2796784 2796806 ACCTCGTGAATAGTA TGCCGGACAGG CAGA TCTGTCCGGCA ATTTGCAGTTAAATC fhlA 2798897 - 2796819 - | formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons TERM 3473 2797303 - 2797315 + g 85 -3.3 -5.44119 | overlap 2797304 TCGCTACGGAACTCT CGGTC GGC GACCA TTTTTTTCAGATCGC TERM 3474 2798729 - 2798781 + g 77 -10 -3.60792 | gap 2, opp_overlap 2798719 2798753 2798755 AATAAGACGCACGTT GAG-TCTGCGCTTGCC-ACAACAC AATAGCC GCGTTGTCGGCGAGCGCAGAACGC TTTACCAGTTGCGAA TERM 3475 2798816 - 2798800 - G 72 -10.1 -3.35775 | overlap 2798798 ACCAGTTGCGAAAGA GCCTCAC ACA GCGAGGC CAGATCGGGCTGCTG TERM 3476 2798931 - 2798915 - R 100 -13.7 -3.72576 | TGTTCTTCCAGGAAA GCACCGC AAA GCGGTGC AAAAGGTCATTGACT hypE 2799939 - 2798971 - | hypothetical protein hypD 2801099 - 2799978 - | hypothetical protein TERM 3477 2800486 - 2800465 - G 72 -5.9 -4.36914 | TCGCTGGCGATAAAA TTATAGGCA TCAG TGCCGATAA CCATACTAACGTGGC TERM 3478 2800750 - 2800760 + g 72 -6.8 -4.18018 | ACGATGCGCACATCG GCAC CGC GTGC TTTTGCCTGCAACAG hypC 2801371 - 2801099 - | hydrogenase isoenzymes formation protein TERM 3479 2801243 - 2801218 - G 72 -9.7 -3.28497 | overlap 2801213 TCATGGCAAAGCCAA CGTGTACCAGT ACCC ACTGGCCCACG CGCGGCTGACCGTTT hypB 2802234 - 2801362 - | hydrogenase nickel incorporation protein HypB TERM 3480 2801958 - 2801971 + g 75 -4.5 -4.82901 | GCGCGCGGTTGCGTT CAGCC AGAC GGTTG TTTTTGTCCAGCACG hypA 2802588 - 2802238 - | hydrogenase nickel incorporation protein TERM 3481 2803075 - 2803052 - g 73 -3.8 -4.87803 | overlap 2803054 TACGTCGAAACAAAA GAGGGCAAAC TGTG GTTTGCGCTG GGGCGTCTTGGCACT hycC 2802800 - 2804236 + | membrane-spanning protein of hydrogenase 3 hycD 2804434 - 2805357 + | membrane-spanning protein of hydrogenase 3 hycE 2805375 - 2807084 + | large subunit of hydrogenase 3 TERM 3482 2807524 - 2807483 - g 76 -12.4 -2.59797 | gap 1, overlap 2807482 2807480 CGTCCAGAAAGAGAT CGACTA-CGCCATTGCGCT GCTTA AGCACAACGGCGACAGCCG CGCGGAAAACCACCG hycF 2807094 - 2807636 + | formate hydrogenlyase complex iron-sulfur subunit hycG 2807636 - 2808403 + | hydrogenase activity hycH 2808400 - 2808810 + | processing of large subunit (HycE) of hydrogenase 3 TERM 3483 2808947 - 2808937 - g 70 -6.8 -4.14243 | overlap 2808942 TAGTGCACCGGAAAA CGAC ATC GTCG CCATCCGTGAACTGC hycI 2808803 - 2809273 + | hydrogenase 3 maturation protease TERM 3484 2809345 - 2809369 + T 76 -12.1 -2.57136 | opp_overlap 2809344 2809343, overlap 2809344 2809364 GCCAAATGCTAAATT GCCCGATGCGC TGC GCTTATCGGGC CTTCCTGGTTCGTGC TERM 3485 2809391 - 2809427 + T 70 -9.4 -3.43338 | gap 1, opp_overlap 2809403, overlap 2809393 2809393 GGTTCGTGCGACATG TAG-GCCGGATAAGGCG TTCA CGCCGCATCCGGCACTG TTACTTACTCTAAAT TERM 3486 2809393 - 2809425 + T 71 -9.8 -3.28487 | gap 1, opp_overlap 2809403, overlap 2809391 2809393 TTCGTGCGACATGTA G-GCCGGATAAGGCG TTCA CGCCGCATCCGGCAC TGTTACTTACTCTAA ascB 2810856 - 2809432 - | cryptic 6-phospho-beta-glucosidase TERM 3487 2810079 - 2810068 - G 84 -3.6 -5.29782 | CACATCGATAAAAAA CAGG TTTT CCCG ATCTTTCTCCAGCGC TERM 3488 2810533 - 2810522 - G 74 -2.2 -5.02439 | overlap 2810527 ACAGAACGATAAAAA GCAA TGCC CTGC TGATTGGGCGTGATT ascF 2812322 - 2810865 - | cellobiose/arbutin/salicin-specific PTS system components IIBC TERM 3489 2811774 - 2811751 - G 75 -5.2 -4.66318 | opp_overlap 2811772, overlap 2811753 2811769 ATCAGTTCAATAAAA CTCGGATGTA CCAG CACACCCGCG ATGGCAATCGCCAGC ascG 2812579 - 2813592 + | ascBF operon repressor TERM 3490 2813605 - 2813634 + F 91 -7.9 -5.18357 | opp_overlap 2813597 2813607, overlap 2813607 TAAACATTGTCATCA CATGTCATCGTCA CTAG TGTCGATGACATC TTTTTTCCTGCATTA TERM 3491 2813607 - 2813632 + F 90 -10.5 -4.2131 | opp_overlap 2813597 2813607, overlap 2813605 AACATTGTCATCACA TGTCATCGTCA CTAG TGTCGATGACA TCTTTTTTCCTGCAT TERM 3492 2813632 - 2813607 - f 72 -10.5 -2.79679 | opp_overlap 2813607 2813605, overlap 2813597 AACATTGTCATCACA TGTCATCGTCA CTAG TGTCGATGACA TCTTTTTTCCTGCAT TERM 3493 2814256 - 2814242 - g 95 -9.2 -4.85599 | opp_overlap 2814241 2814242 CTGAGTGCAGAAAAA CGCCGC CGT ACGGCG CTGATGTTCTAAAAA hydN 2813741 - 2814268 + | electron transport protein HydN TERM 3494 2814442 - 2814432 - g 77 -3.2 -5.09426 | opp_overlap 2814439 CTCAATGGCAAAAAA CACA TCT TGCG GTGTCCAACTGCGTA TERM 3495 2816074 - 2816088 + G 90 -11.4 -3.86346 | opp_overlap 2816068 2816067 TGGCGAAACCTGCTG GCGCAG TGC CTGCGC TTTGTGCCGGAGTGG hypF 2814421 - 2816673 + | transcriptional regulatory protein TERM 3496 2816760 - 2816715 - T 86 -12 -3.53811 | opp_overlap 2816707 2816747 2816748, overlap 2816696 2816757 CGGATGCGGCGTAAA CGCCTTATCCGGCCTACA CATGCGTCCC CGTAGGTCGGATAAGACG CGCTAGCGTCGCATC TERM 3497 2816747 - 2816780 + T 83 -9.5 -4.08216 | opp_overlap 2816715 2816757, overlap 2816748 ACATGCGTCCCCGTA GGTCGGATAAGACGC GCTA GCGTCGCATCCGACA TTTTAGGCACAGTAG TERM 3498 2816748 - 2816779 + T 82 -13 -3.04715 | opp_overlap 2816715 2816757, overlap 2816747 CATGCGTCCCCGTAG GTCGGATAAGACGC GCTA GCGTCGCATCCGAC ATTTTAGGCACAGTA ygbD 2817934 - 2816909 - | nitric oxide reductase TERM 3499 2817188 - 2817213 + g 90 -13.3 -3.53224 | gap 1, opp_overlap 2817172 GCCGCGATTAATCGT CAGCCC-GGCGC GTC GTGCCAGGGCTG TTTCCGGGCGCAGTC TERM 3500 2817759 - 2817738 - G 77 -12.3 -2.72043 | overlap 2817737 AACTGCTCGGCAAAT TCACCCGCC GTCT GGCGGGTAA GGTCATCGGCACGTT SBO_2808 2819370 - 2817931 - | anaerobic nitric oxide reductase flavorubredoxin TERM 3501 2819271 - 2819285 + g 84 -7.8 -4.68724 | overlap 2819272 GGTAGCTGTTGTAAC TGCTGC CGC GCAGCG TTTTATATTCCGTAC ygaA 2819557 - 2821071 + | anaerobic nitric oxide reductase transcription regulator gutQ 2822033 - 2821068 - | D-arabinose 5-phosphate isomerase TERM 3502 2821835 - 2821822 - G 100 -3.7 -5.64274 | overlap 2821823 GGATGGACAAAAAAA GCCGG TGTG CCGGT ACTGGCAAGTGTTGC srlR 2822799 - 2822026 - | DNA-bindng transcriptional repressor SrlR TERM 3503 2822105 - 2822129 + g 78 -10.8 -3.55444 | opp_overlap 2822089 GCCGGATCGATACCT GCGTCGGTAA TCAGC TTATCGACGC TTTCAAGACTGCAAA TERM 3504 2823259 - 2823285 + r 100 -15.2 -3.57651 | GGCGGAAGTCCTGTA TGCCTGATGAGC GTA GCGCATCAGGCA TTCTATAGTCTCACG TERM 3505 2823297 - 2823324 + r 74 -10.7 -3.14564 | gap 1, overlap 2823294 GGCATTCTATAGTCT CA-CGGAGATCC TTAAT GGATCTCCGCTG TTGATCAGAACATCA srlD 2824108 - 2823329 - | sorbitol-6-phosphate dehydrogenase srlB 2824483 - 2824112 - | glucitol/sorbitol-specific PTS system component IIA srlE 2825453 - 2824494 - | PTS system glucitol/sorbitol-specific IIB component and second of two IIC components TERM 3506 2825087 - 2825106 + g 79 -3.6 -5.093 | overlap 2825064 AGGGTTGTGGTGTCG CATCAC CCACTACA GTGATG TTTTCTTCTTTTACG srlA 2826013 - 2825450 - | PTS system glucitol/sorbitol-specific IIC component, one of two TERM 3507 2825799 - 2825786 - G 82 -8.1 -4.45771 | overlap 2825780 ATTGCAAAAGACAAA CGTGC CAAT GCACG GTAGCAGCAGGTAAC mltB 2826269 - 2827354 + | murein hydrolase B TERM 3508 2827354 - 2827398 + F 84 -5 -5.28778 | gap 1, opp_overlap 2827355 2827358, overlap 2827355 GGCGCGCGTGCAGTA ACT-ATTTGCAAGAGGGGGGC GTGA GCTTCCCTCTGGCTAATCAGC TTTTTTCTGAATCCT TERM 3509 2827355 - 2827397 + F 72 -8.5 -3.76182 | gap 1, opp_overlap 2827355 2827358, overlap 2827354 GCGCGCGTGCAGTAA CT-ATTTGCAAGAGGGGGGC GTGA GCTTCCCTCTGGCTAATCAG CTTTTTTCTGAATCC ygaD 2827499 - 2827996 + | competence damage-inducible protein A TERM 3510 2828335 - 2828296 - g 100 -14.4 -4.08064 | gap 1, opp_overlap 2828331, overlap 2828297 AATCTTCCGGTAAAA CCACGCTGACGCTGCAG GTGATCG CCGCAGCG-CAGCGTGA AGGTAAAACCTGTGC TERM 3511 2828334 - 2828297 - g 95 -15.7 -3.04517 | gap 1, opp_overlap 2828331, overlap 2828296 ATCTTCCGGTAAAAC CACGCTGACGCTGCAG GTGATCG CCGCAGCG-CAGCGTG AAGGTAAAACCTGTG recA 2828076 - 2829137 + | recombinase A TERM 3512 2829332 - 2829349 + F 100 -10.5 -4.86862 | opp_overlap 2829331 TTATCAGCAAAACCT GGGTCGC ATCT GCGGCCC TTTTGCTTTTTTAAG recX 2829380 - 2829880 + | recombination regulator RecX alaS 2830008 - 2832638 + | alanyl-tRNA synthetase csrA 2832873 - 2833058 + | carbon storage regulator TERM 3513 2833633 - 2833618 - f 70 -9 -3.42996 | overlap 2833632 CACCAGGGAGGATAA CGTTGC TTTA GCAACG GCCAGAAGGGCGAGC TERM 3514 2833909 - 2833894 - f 70 -9 -3.42996 | overlap 2833908 CACCAGGGATGATAA CGTTGC TTTA GCAACG GCCCGAAGGGCGAGC TERM 3515 2833926 - 2833908 - f 71 -9.5 -3.14211 | overlap 2833894 ACGTTGCTTTAGCAA CGGCCCG AAGGG CGAGCCG CAAGGCGAGTAATCC yqaB 2834271 - 2834798 + | fructose-1-phosphatase SBO_2828 2834795 - 2835223 + | hypothetical protein gshA 2835296 - 2836852 + | glutamate--cysteine ligase TERM 3516 2836883 - 2836866 - f 100 -11.3 -5.58522 | GACAGAAAAGAAAAA GGCCACT CGTG AGTGGCC AAAATTTCATCTCTG ygaG 2837002 - 2837517 + | S-ribosylhomocysteinase TERM 3517 2837570 - 2837551 - T 100 -12.2 -5.1848 | opp_overlap 2837551 2837547 AATTAATTGAAAAAA GCCAGTTC AAAT GAACTGGC TTAGTTGTACTTAGT TERM 3518 2837551 - 2837570 + T 88 -12.2 -3.50422 | opp_overlap 2837551, overlap 2837547 AATTAATTGAAAAAA GCCAGTTC AAAT GAACTGGC TTAGTTGTACTTAGT emrB 2839119 - 2837581 - | multidrug resistance emrA 2840308 - 2839136 - | multidrug resistance secretion protein TERM 3519 2839897 - 2839908 + g 86 -5.8 -5.03314 | AGTCGCTTTGTGCTT TCGC GAGG GCGA TTTTTTGCACCTCAA TERM 3520 2840387 - 2840364 - R 100 -12.5 -4.56597 | opp_overlap 2840351 2840363 2840362 2840360 CCTGCTTGCCAAAAA GGCCAGCAT GTTGCG ATGCTGGCC GGTCATTTTTTCTTT emrR 2840965 - 2840435 - | transcriptional repressor MprA ygaH 2841391 - 2841056 - | hypothetical protein TERM 3521 2841154 - 2841144 - G 70 -6.8 -4.03234 | CGTGTTTTATAGAAA CTGG CAC CCAG TACCGCGAAGCCGAC SBO_2835 2842118 - 2841381 - | hypothetical protein SBO_2836 2843426 - 2842242 - | permease TERM 3522 2843248 - 2843235 - G 77 -6.7 -4.45738 | overlap 2843237 GAGGGGAACAAGAAA CAGCA GACC TGCTG CATAGCCCAATTGCG TERM 3523 2843608 - 2843577 - R 88 -12.2 -3.48924 | opp_overlap 2843587, overlap 2843578 GCATTGTGCACAGAA CGGCGGATGCGGCG AAAA CGCCTTATCCGCCA TACGGAATGAGTGTA TERM 3524 2843607 - 2843578 - R 81 -13.5 -2.6914 | opp_overlap 2843587, overlap 2843577 CATTGTGCACAGAAC GGCGGATGCGGCG AAAA CGCCTTATCCGCC ATACGGAATGAGTGT TERM 3525 2843709 - 2843676 - R 77 -11.7 -2.87931 | overlap 2843687 GGCATTGTGTACAGA GCGGCGGATAAGGCA AAAA CGCCTTATCCGCCTG AATAAAAATTACTTC proX 2844710 - 2843718 - | glycine betaine transporter periplasmic subunit TERM 3526 2843889 - 2843904 + g 71 -3.2 -4.87665 | opp_overlap 2843880, overlap 2843891 CATAATGGCAAACAG TTTGGC TGCC GCCGGA TTTTTCTCGGTCCAG TERM 3527 2844758 - 2844740 - R 85 -12.4 -3.31144 | TTGGCAGGGTGATAA TGCCCGGC GTC ACCGGGCA AGTGCAGAGTTACTT proW 2845832 - 2844768 - | glycine betaine transporter membrane protein proV 2847027 - 2845825 - | glycine betaine transporter ATP-binding subunit TERM 3528 2847267 - 2847243 - H 87 -7.2 -5.14477 | TAGATAGCGAAAAAA CGCCTGAA TATTGTAGT TTCAGGCG AATAATGCAACAGAG TERM 3529 2848012 - 2848002 - g 79 -4.6 -5.00616 | overlap 2848003 2848004 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 3530 2848547 - 2848533 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 3531 2848643 - 2848631 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG SBO_2840 2847760 - 2848959 + | IS1294 transposase nrdF 2850029 - 2849115 - | ribonucleotide-diphosphate reductase subunit beta nrdE 2852183 - 2850039 - | ribonucleotide-diphosphate reductase subunit alpha TERM 3532 2850889 - 2850862 - GR 95 -14.2 -3.54129 | gap 1, overlap 2850863 GACACCGCCGTTAAA CCGCGCACGGCAG TCT CTACCGTGCG-GG CAAAATCGGGGGAAT TERM 3533 2850889 - 2850863 - GR 90 -14.4 -2.72263 | overlap 2850862 ACACCGCCGTTAAAC CGCGCACGGCAG TCT CTACCGTGCGGG CAAAATCGGGGGAAT nrdI 2852566 - 2852156 - | ribonucleotide reductase stimulatory protein nrdH 2852808 - 2852563 - | glutaredoxin-like protein TERM 3534 2853024 - 2853004 - R 100 -12.6 -4.89063 | opp_overlap 2853022 CCAGGCAAAAAGAAA CCCCGAAG ACAGG CTTCGGGG TCAAAGACGCGTATT ygaM 2853397 - 2853056 - | hypothetical protein SBO_2846 2853689 - 2853459 - | putative IS1 encoded protein insB 2853764 - 2854267 + | IS1 ORF2 TERM 3535 2854492 - 2854482 - g 70 -5.4 -4.43681 | overlap 2854485 2854486 2854489 CATCCAACATTAAAA GAAC GCA GTTC AACACTGGCTGAACC ygaC 2854314 - 2854658 + | hypothetical protein TERM 3536 2854686 - 2854660 - T 93 -12.2 -3.68619 | overlap 2854662 GCGAAGCCAGTTAAA GACGCGACTGGC GAT GCCAGTCGCGAA AAGAAGAGTCAGGCT TERM 3537 2854684 - 2854662 - T 100 -19.2 -3.42283 | overlap 2854660 GAAGCCAGTTAAAGA CGCGACTGGC GAT GCCAGTCGCG AAAAGAAGAGTCAGG SBO_2849 2855144 - 2854695 - | hypothetical protein TERM 3538 2855507 - 2855531 + H 83 -6.5 -4.92791 | opp_overlap 2855507 2855512, overlap 2855512 TGTACATTAACAGCA GAAAGCACC AGTGAGG GGTGTTTTC TTTTATTCTGTTATA TERM 3539 2855512 - 2855526 + H 79 -2.8 -5.31091 | opp_overlap 2855512 2855507, overlap 2855507 ATTAACAGCAGAAAG CACC AGTGAGG GGTG TTTTCTTTTATTCTG TERM 3540 2856095 - 2856078 - g 83 -6.2 -5.00616 | overlap 2856080 CGTGCTGGTAAAAAA CGCCAG CCGCGT CCGGCG AAATATAAATTCACT stpA 2855811 - 2856215 + | DNA binding protein, nucleoid-associated ygaP 2856786 - 2856262 - | hypothetical protein SBO_2852 2857095 - 2856796 - | hypothetical protein TERM 3541 2857227 - 2857239 + H 78 -6.3 -4.58395 | AATTACTACGCTTAA GAGAT AAA ATCTC TTTTTAAACAATGAG SBO_2853 2857278 - 2857436 + | hypothetical protein TERM 3542 2857452 - 2857471 + F 81 -12.8 -3.29649 | ACCTGTGCTCCCCCC CGCGGCGT TAAC GCGCCGCG TTCCTCTGCTACACT TERM 3543 2857904 - 2857890 - g 71 -2.8 -4.77567 | overlap 2857892 ATCTGTACAATAAAA TCTTCG AAG CGAATA AACCGATGCTAAAAA TERM 3544 2857942 - 2857920 - g 100 -10.6 -4.63184 | overlap 2857907 2857921 AACCGATGCTAAAAA GCCCGGATAA AAT TTATCCGGGG CAAGTGTTGCGTATT TERM 3545 2857941 - 2857921 - g 95 -14.1 -3.37188 | overlap 2857907 2857920 ACCGATGCTAAAAAG CCCGGATAA AAT TTATCCGGG GCAAGTGTTGCGTAT ygaU 2857520 - 2857969 + | hypothetical protein ygaE 2858632 - 2857970 - | DNA-binding transcriptional regulator CsiR TERM 3546 2858062 - 2858037 - G 73 -11.8 -2.56596 | opp_overlap 2858035, overlap 2858033 TGGCGCATTAACTCA CTGGCGCGCG CGGTAT CTCGCGCCAG TACCGCCGCAGTCAG TERM 3547 2858427 - 2858404 - G 72 -6.8 -4.18018 | gap 1, overlap 2858406 CGCGGGCATCGAAAA TATC-GAGCAG CTC CTGCTCTGACA TAGACGCCACCCGAT gabP 2860052 - 2858691 - | gamma-aminobutyrate transporter TERM 3548 2860202 - 2860233 + r 71 -10.8 -2.61548 | opp_overlap 2860201 2860220, overlap 2860212 2860227 TGTTCACGTACAGAT TGTCGGATGCGGCG TAAA CGCCTTATCCGACC TGGATTCTCGTAGGC TERM 3549 2860259 - 2860220 - R 79 -10.8 -3.53811 | gap 1, opp_overlap 2860212 2860202 2860227, overlap 2860201 2860256 2860258 CGGATGCGGCGTAAA CGCCTTATCCGACCT-GGA TTC TCGTAGGCCGGACAAGACG CGCAGCGTCGCCTCC TERM 3550 2860268 - 2860256 - R 70 -9.1 -3.30124 | opp_overlap 2860261, overlap 2860220 2860258 TCGTAGGCCGGACAA GACGC GCA GCGTC GCCTCCTGCATGGGG TERM 3551 2860422 - 2860457 + r 74 -6.8 -4.20106 | gap 1 GAGAAGAATCAGGCC CTTATCG-CGGGCGCGT GCC ACGATCCCGGCGGTGAG TTTTGCGTCCGGTTT TERM 3552 2862500 - 2862448 - R 75 -9.8 -3.50393 | gap 2, opp_overlap 2862485 2862497 CGCCAGCGCAGAGAA CGGTGTCTGACTGGCGGGCTTCAGCA CCA TGGTGCAGCCTGCC-GCCAG-CGCCG GACCGGCTTTACGGG ygaF 2864362 - 2863028 - | hypothetical protein TERM 3553 2863557 - 2863547 - GR 88 -8.2 -4.60041 | ATGCACGCCCAAAAA CGGC ATT GCCG GGTCAGGGATGGGGT TERM 3554 2863660 - 2863650 - GR 75 -4.6 -4.84311 | opp_overlap 2863654 GGGCAGATAATAAAA CCCG GTT CGAG GCCGAGCATTTTCAC TERM 3555 2863746 - 2863760 + gr 76 -3.5 -4.9218 | gap 1 CCGCCCTGACGGGTT CGGACG ACCA CG-CCG TTTTTATGCTCACTG SBO_2860 2865293 - 2864316 - | hypothetical protein TERM 3556 2864672 - 2864655 - GR 72 -9.1 -3.53012 | CGGCGGCGCGGCAAA GCGCATC GGGC GACGCGC CAGTGGATGGCGGAA TERM 3557 2865561 - 2865544 - R 81 -4.9 -5.24129 | CTGGTCGATAAAAAA CAGTAAA TGGC TTCACTG CAAAATGACCGTTAG TERM 3558 2865623 - 2865586 - R 71 -7 -4.10552 | opp_overlap 2865586, overlap 2865588 2865590 2865591 2865593 CGTTAGTAAACTAAA CATATTATCTGCCCCG TTTTAT CGGGGCAGATATAACA TTAAATTATAAATAG TERM 3559 2865620 - 2865588 - R 82 -11.5 -3.64541 | gap 1, opp_overlap 2865586, overlap 2865586 2865590 2865591 2865593 TTAGTAAACTAAACA TATTATCTGCCCCG TTTTAT CGGGGCAGATA-TA ACATTAAATTATAAA TERM 3560 2865619 - 2865590 - R 85 -12.2 -3.39117 | opp_overlap 2865586, overlap 2865588 2865586 2865591 2865593 AGTAAACTAAACATA TTATCTGCCCCG TTTTAT CGGGGCAGATAT AACATTAAATTATAA TERM 3561 2865618 - 2865591 - R 90 -15.7 -2.62386 | opp_overlap 2865586, overlap 2865590 2865588 2865586 2865593 GTAAACTAAACATAT TATCTGCCCCG TTTTAT CGGGGCAGATA TAACATTAAATTATA TERM 3562 2865616 - 2865593 - R 84 -13.9 -2.83953 | opp_overlap 2865586, overlap 2865591 2865590 2865588 2865586 AAACTAAACATATTA TCTGCCCCG TTTTAT CGGGGCAGA TATAACATTAAATTA SBO_2861 2865901 - 2865629 - | hypothetical protein TERM 3563 2865688 - 2865676 - G 72 -6.9 -4.17048 | TTTTCCCTAAAAGAA GAGCG CTA CGCCC AGGAATATTGATATT SBO_2862 2867357 - 2867175 - | putative IS1 encoded protein insB 2867450 - 2867953 + | IS1 ORF2 SBO_2865 2868569 - 2868856 + | hypothetical protein SBO_2866 2869045 - 2870163 + | hydrogenase 2 small subunit TERM 3564 2870509 - 2870496 - g 72 -6.7 -4.29106 | GCGTACATTAAGAAA CAGTG TATG CACTG CGTCGATCCGAACTG hybA 2870166 - 2871152 + | hydrogenase 2 protein HybA TERM 3565 2872298 - 2872287 - g 81 -4.4 -5.07652 | overlap 2872290 2872296 TCCTTTAAAACAAAA CGAT CATA ATCG TCATGAGGCGAGCAA hybB 2871142 - 2872320 + | putative hydrogenase 2 b cytochrome subunit TERM 3566 2872471 - 2872457 - g 72 -4.9 -4.61633 | opp_overlap 2872463, overlap 2872445 2872458 AGAGATCGTGAAAAA CCGCG ATCCG CGCGA TGCATGGATGATTGT hybC 2872317 - 2874020 + | hydrogenase 2 large subunit TERM 3567 2874373 - 2874358 - g 70 -4.6 -4.57569 | TGAGTTTCCGAAAAA GCTGAC CCTG GTCGGC GTGATCCCGGAATCG hybD 2874020 - 2874514 + | hydrogenase 2 maturation endopeptidase TERM 3568 2874942 - 2874965 + G 100 -13.2 -3.72695 | gap 1, opp_overlap 2874929 2874944, overlap 2874945 AATCCGGATGTACCA CACGCAGGGCG TCG CGCCCTGC-TG TTTGGTCGCAGGAGT TERM 3569 2874964 - 2874944 - g 77 -12.5 -2.80816 | opp_overlap 2874942 2874945, overlap 2874929 TCCGGATGTACCACA CGCAGGGCG TCG CGCCCTGCT GTTTGGTCGCAGGAG TERM 3570 2874945 - 2874963 + G 100 -16 -3.44848 | opp_overlap 2874944 2874929, overlap 2874942 CCGGATGTACCACAC GCAGGGCG TCG CGCCCTGC TGTTTGGTCGCAGGA hybE 2874507 - 2874995 + | hydrogenase 2-specific chaperone TERM 3571 2875086 - 2875121 + G 88 -8.4 -4.67641 | gap 2, opp_overlap 2875086 2875085, overlap 2875087 2875087 2875089 CGTGTGGCTGGAAAT TGG-C-GCGCTCTCCT GCGTTG AGGAGAGCGCCGTCCG TTTTAGTTTTGAAAT TERM 3572 2875087 - 2875120 + G 72 -9.7 -3.395 | gap 2, opp_overlap 2875086 2875085, overlap 2875087 2875086 2875089 GTGTGGCTGGAAATT GG-C-GCGCTCTCCT GCGTTG AGGAGAGCGCCGTCC GTTTTAGTTTTGAAA TERM 3573 2875087 - 2875119 + G 76 -12.1 -2.62977 | gap 1, opp_overlap 2875086 2875085, overlap 2875086 2875087 2875089 GTGTGGCTGGAAATT GGC-GCGCTCTCCT GCGTTG AGGAGAGCGCCGTC CGTTTTAGTTTTGAA TERM 3574 2875089 - 2875117 + G 71 -11.1 -2.84272 | gap 1, opp_overlap 2875086 2875085, overlap 2875087 2875087 2875086 GTGGCTGGAAATTGG C-GCGCTCTCCT GCGTTG AGGAGAGCGCCG TCCGTTTTAGTTTTG hybF 2874988 - 2875329 + | hydrogenase nickel incorporation protein HybF hybG 2875342 - 2875590 + | hydrogenase 2 accessory protein HypG TERM 3575 2875606 - 2875639 + T 73 -9.5 -3.31322 | opp_overlap 2875616 2875618 2875619, overlap 2875607 2875619 TGATTAGCTTTCGTA GGCCTGATAAGACGC GGCA GCGTCGCATCAGGCA TTGTGCACGATTGCC TERM 3576 2875607 - 2875638 + T 81 -13 -2.58579 | opp_overlap 2875616 2875618 2875619, overlap 2875606 2875619 GATTAGCTTTCGTAG GCCTGATAAGACGC GGCA GCGTCGCATCAGGC ATTGTGCACGATTGC SBO_2874 2876627 - 2875713 - | putative glutathione S-transferase YghU gsp 2876784 - 2878643 + | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 3577 2878658 - 2878694 + T 100 -16.8 -3.16668 | opp_overlap 2878648 2878659, overlap 2878648 2878648 ATACATGTTGTAGCA ACCCCGTACTGATTAT GAAGA ATAATCAGTACGGGGA TTAATCAAAATATTC TERM 3578 2878693 - 2878659 - T 100 -20.3 -3.15249 | opp_overlap 2878658 2878648 2878648, overlap 2878648 TACATGTTGTAGCAA CCCCGTACTGATTAT GAAGA ATAATCAGTACGGGG ATTAATCAAAATATT insB 2879392 - 2878889 - | IS1 ORF2 SBO_2877 2879472 - 2879675 + | putative IS1 encoded protein TERM 3579 2879717 - 2879690 - T 100 -16.4 -3.08996 | GATTCTGATGTAATA TCCCCGGTAGCA ATTC TGCTACCGGGAA CAGCGAATTTAACGT ygiRQ 2881945 - 2879726 - | hypothetical protein TERM 3580 2879785 - 2879797 + g 90 -4.8 -5.44119 | TCACCGGACGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC TERM 3581 2881138 - 2881150 + g 70 -5.5 -4.30719 | overlap 2881139 TGGCTTCCTGCTTTT TCGGT GCC ACCGG TTTGTTATCCGCGCA TERM 3582 2882059 - 2882019 - R 86 -9.3 -4.42081 | gap 2, overlap 2882020 2882022 AAGAGAAATCGAAAA GTA-T-TCCATACTCGCCC TCCTC GGGCGAGTATGAAGATTAC GGTACCGGATTGACT TERM 3583 2882055 - 2882020 - R 71 -9.9 -3.23622 | gap 1, overlap 2882019 2882022 AGAGAAATCGAAAAG TATTCCATACTCGCCC TCCTC GGGCGAGTATG-AAGA TTACGGTACCGGATT TERM 3584 2882054 - 2882022 - R 81 -12.8 -3.16695 | overlap 2882020 2882019 AGAAATCGAAAAGTA TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG ATTACGGTACCGGAT sufI 2883468 - 2882056 - | repressor protein for FtsI plsC 2884280 - 2883543 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase parC 2886771 - 2884513 - | DNA topoisomerase IV subunit A TERM 3585 2885942 - 2885963 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACGC TERM 3586 2886900 - 2886874 - R 75 -11.5 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGACGGCGA TAAAGGCATCAATGT SBO_2882 2887799 - 2887317 - | hypothetical protein ygiW 2888244 - 2887852 - | hypothetical protein qseB 2888396 - 2889055 + | DNA-binding transcriptional regulator QseB TERM 3587 2889304 - 2889283 - g 70 -3.7 -4.72863 | CCAAATAAATTAAAA CACGGTCAT GTTG ATGACGATG CGCTGACCTTTGCCA qseC 2889052 - 2890401 + | sensor protein QseC TERM 3588 2890625 - 2890576 - g 81 -12.9 -2.78712 | gap 1, opp_overlap 2890578 2890581, overlap 2890573 2890578 TGGTCAACTGAATGA CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATG TTCGCATCGTTCGCG TERM 3589 2890765 - 2890751 - g 77 -2.9 -5.1287 | TGGACAGTGAAAAAA TACAT TGATG ATGTA TTCACCGAAGGTCAC mdaB 2890511 - 2891092 + | modulator of drug activity B ygiN 2891123 - 2891437 + | hypothetical protein TERM 3590 2891447 - 2891475 + T 71 -7.3 -4.15396 | overlap 2891449 ATTTAATCCTGCCTT GTTTGCCCGGCCA TCC TGACCGGGCAATG TTCTTTCCTTTAAAC TERM 3591 2891449 - 2891473 + T 100 -14.3 -3.66578 | overlap 2891447 TTAATCCTGCCTTGT TTGCCCGGCCA TCC TGACCGGGCAA TGTTCTTTCCTTTAA parE 2893377 - 2891485 - | DNA topoisomerase IV subunit B TERM 3592 2893106 - 2893081 - G 78 -10.5 -3.48395 | ATTTTTGTTAGAGAA TTTACCGCCTG CATG CAGACGGCAAA GAATCAGTTCAACCG yqiA 2893987 - 2893406 - | esterase YqiA icc 2894814 - 2893987 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 2895261 - 2894839 - | hypothetical protein TERM 3593 2894928 - 2894938 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA nudF 2895891 - 2895262 - | ADP-ribose pyrophosphatase NudF tolC 2896096 - 2897577 + | outer membrane channel protein TERM 3594 2897804 - 2897815 + G 71 -2.2 -4.9218 | overlap 2897803 CACCAGTCGCTCTCG CGGT TGCC ACTG TTTTTATGCTGGCTA ygiA 2897577 - 2897831 + | hypothetical protein TERM 3595 2898069 - 2898054 - gf 70 -4.6 -4.46926 | CATGGCACCAGAAAA CCAGGC GCAG GCCCAG CAATCCAGCGGGAGT TERM 3596 2898255 - 2898225 - gf 88 -8.3 -4.59773 | gap 1, overlap 2898226 2898228 CGCGACGGGTAAAAA CTATGGCGCAGCCC AGCC AGGCCGCACCAT-G ACCGTACCGAAGACA TERM 3597 2898253 - 2898228 - gf 77 -11.1 -3.24422 | overlap 2898225 2898226 GACGGGTAAAAACTA TGGCGCAGCCC AGCC AGGCCGCACCA TGACCGTACCGAAGA TERM 3598 2898362 - 2898344 - gf 70 -5.2 -4.42806 | CTATTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC ygiB 2897725 - 2898396 + | hypothetical protein TERM 3599 2898464 - 2898508 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 2898478, overlap 2898467 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGCC TERM 3600 2898467 - 2898505 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 2898478, overlap 2898464 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT ygiC 2898402 - 2899562 + | putative synthetase/amidase TERM 3601 2899569 - 2899596 + T 93 -12 -3.67558 | opp_overlap 2899567 2899563 2899570, overlap 2899572 GTTGAGTAATCAATG ATGCCGGATGGC ATTC GCCATCCGGTAA TTGTTAACCTATCTG TERM 3602 2899595 - 2899570 - T 82 -13.3 -2.85896 | opp_overlap 2899569 2899572, overlap 2899567 2899563 TTGAGTAATCAATGA TGCCGGATGGC ATTC GCCATCCGGTA ATTGTTAACCTATCT TERM 3603 2899572 - 2899593 + T 93 -15.9 -2.94313 | opp_overlap 2899570 2899567 2899563, overlap 2899569 GAGTAATCAATGATG CCGGATGGC ATTC GCCATCCGG TAATTGTTAACCTAT ygiD 2900415 - 2899600 - | hypothetical protein TERM 3604 2900391 - 2900414 + g 75 -6.8 -4.371 | opp_overlap 2900391 GTGTTGAAGACATGA TGATATCCTT AACT AAGGGTGTCA TTTTGATATCCTCAC ygiE 2900531 - 2901292 + | zinc transporter ZupT TERM 3605 2901339 - 2901296 - T 72 -4.7 -4.59853 | gap 1, opp_overlap 2901307 2901336, overlap 2901299 2901301 2901302 2901304 GGAATTGGTTAAAAA CAAC-ATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCAGCTT CACGAAAGCCTTATT TERM 3606 2901335 - 2901299 - T 95 -11 -4.40963 | opp_overlap 2901307, overlap 2901296 2901301 2901302 2901304 ATTGGTTAAAAACAA CATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCA GCTTCACGAAAGCCT TERM 3607 2901333 - 2901301 - T 100 -13.6 -3.80746 | opp_overlap 2901307, overlap 2901299 2901296 2901302 2901304 TGGTTAAAAACAACA TCAGAAGTTGTCCA GCACA TGGACAACTTCTGC CAGCTTCACGAAAGC TERM 3608 2901332 - 2901302 - T 100 -17.1 -2.87725 | opp_overlap 2901307, overlap 2901301 2901299 2901296 2901304 GGTTAAAAACAACAT CAGAAGTTGTCCA GCACA TGGACAACTTCTG CCAGCTTCACGAAAG TERM 3609 2901330 - 2901304 - T 85 -13.9 -2.97636 | opp_overlap 2901307, overlap 2901302 2901301 2901299 2901296 TTAAAAACAACATCA GAAGTTGTCCA GCACA TGGACAACTTC TGCCAGCTTCACGAA TERM 3610 2901307 - 2901327 + T 73 -9.8 -3.31322 | opp_overlap 2901304 2901302 2901301 2901299 2901296 AAAACAACATCAGAA GTTGTCCA GCACA TGGACAAC TTCTGCCAGCTTCAC TERM 3611 2901745 - 2901724 - T 86 -5.1 -5.46706 | opp_overlap 2901724 AGGGCAAAATAAAAA CCGAAGCCA GCTA CAACTTCGG TTTCTTGATTAAGGC ribB 2902433 - 2901780 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 3612 2902148 - 2902176 + g 90 -10.3 -4.41206 | opp_overlap 2902153 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT SBO_2900 2902747 - 2903097 + | hypothetical protein TERM 3613 2903113 - 2903151 + F 91 -11.4 -4.24397 | gap 1, opp_overlap 2903116 ACATTTGTCTTTAAT GCACTGTAAATTATGAA TTAATC TTC-TAATTTACAGTGC TTTCTATTACCTTAT ygiL 2903381 - 2903959 + | putative fimbrial protein SBO_2902 2904408 - 2903962 - | IS629 ORF2 SBO_2903 2904850 - 2904392 - | IS629 ORF2 TERM 3614 2904530 - 2904542 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_2904 2905125 - 2904850 - | IS629 ORF1 TERM 3615 2905272 - 2905255 - R 83 -14.1 -2.70936 | opp_overlap 2905252, overlap 2905252 CGAGTAATCACATTA GGCCGGG TTCG CCCGGCC ACATCATTAACGGAT TERM 3616 2905540 - 2905529 - R 70 -2.2 -4.92757 | TTATTAATAATAAAA GGAC GCCA ATCC ATCTGGACCTGCAAT TERM 3617 2906670 - 2906699 + r 89 -11.5 -4.08706 | opp_overlap 2906669 ACGTTTTGAATCTAC CGGTAGCCAGC TCACTTTC GCTGGTTACCG TTTCTCTGATAAAAA insB 2907285 - 2906782 - | IS1 ORF2 TERM 3618 2908742 - 2908726 - g 72 -4.4 -4.59919 | gap 1, opp_overlap 2908726, overlap 2908727 AAAGCAGAAAAAGAA GCC-GCA GAGA TGCAGGC GGCGGCTATCGTTAA SBO_2907 2907544 - 2909172 + | hypothetical protein TERM 3619 2909190 - 2909212 + T 100 -8.4 -5.4251 | opp_overlap 2909189 TTTCAGCTATGAACG TCCCTGGC ACAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3620 2909391 - 2909372 - T 86 -11.4 -3.71649 | overlap 2909356 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTACAGAAGGAAAG TERM 3621 2909566 - 2909588 + T 79 -2.6 -5.4251 | opp_overlap 2909566 TTTCATTAACACATA TCCCTAGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3622 2909767 - 2909748 - T 86 -11.4 -3.71649 | opp_overlap 2909747 2909748, overlap 2909731 2909741 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG SBO_2908 2911399 - 2909966 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase glnE 2914287 - 2911447 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 3623 2912440 - 2912415 - G 72 -11.1 -3.04144 | opp_overlap 2912407 2912401 2912432 2912437 CGGCGATGCGTAACA GCTGCGCCTGT TTGA ACTGACGCAGC GCCTCAAGCTGTTGC TERM 3624 2913462 - 2913445 - G 70 -4 -4.6951 | ACGACGGAAAACAAA CGGGCG CAGCAT CGCACG CAACTCGTTAGCATA TERM 3625 2913774 - 2913759 - G 77 -6.2 -4.65895 | CCGGCCAGGCAAAAA TCAGAT CGAT ATCTGA GGAGAAATTCAGTTC ygiF 2915611 - 2914310 - | hypothetical protein TERM 3626 2914666 - 2914640 - G 72 -5 -4.65895 | opp_overlap 2914640, overlap 2914641 TTTGGCATCTAAAAA CGGCTGCCAGGC TTT GCTTACCAGCCA TTCGGTCAACGCCAG ygiM 2915853 - 2916473 + | putative signal transduction protein TERM 3627 2916643 - 2916670 + G 95 -11.2 -4.47397 | overlap 2916644 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTGTTTCT TERM 3628 2916644 - 2916669 + G 95 -14.7 -3.26811 | overlap 2916643 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTGTTTC TERM 3629 2916742 - 2916754 + G 90 -9.1 -4.4773 | opp_overlap 2916729 2916736 AACGGAAATCCGGTT CCGGT TAC ACCGG TTTTACTTGCTATGC TERM 3630 2916945 - 2916955 + G 78 -8.2 -4.2679 | overlap 2916944 2916945 CCGTTACGCGTTCTG CGCG TGG CGCG TTTTGCTGCGCGTTA TERM 3631 2917128 - 2917149 + G 75 -5.1 -4.63218 | gap 1 TTCTTCCAGGTACTG CGCG-ATTGC GGT GCACTTCGCG TTTTATTCCCGGAAA cca 2916537 - 2917775 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 3632 2917834 - 2917801 - T 86 -13.1 -3.38361 | gap 1, overlap 2917804 AAACGTTAACACGAA CCATC-CCCTCGCCCC TTC GGGGAGAGGGTGAGGG GAACAGACCAGCACC TERM 3633 2917836 - 2917804 - T 84 -14.1 -2.84723 | overlap 2917801 CGTTAACACGAACCA TCCCCTCGCCCCTTC GGG GAGAGGGTGAGGGGA ACAGACCAGCACCGG bacA 2918753 - 2917932 - | undecaprenyl pyrophosphate phosphatase folB 2919215 - 2918844 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiH 2919317 - 2919934 + | putative glycerol-3-phosphate acyltransferase PlsY insB 2921158 - 2920655 - | IS1 ORF2 SBO_2918 2921233 - 2921469 + | putative IS1 encoded protein TERM 3634 2921603 - 2921589 - f 72 -2.8 -5.06052 | opp_overlap 2921589 GCAAAAAATATAAAA CCAC ATTTTTA GTGG TAGTTTATGGCGGTG ttdA 2921654 - 2922565 + | tartrate dehydratase subunit alpha TERM 3635 2923116 - 2923101 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 2922562 - 2923167 + | L(+)-tartrate dehydratase subunit beta TERM 3636 2923175 - 2923195 + F 84 -8.3 -4.57073 | opp_overlap 2923168 2923169 TCAAATAACCCTCCC GGAGAGG CTCGCCC CCTCTCC TTTTTCGCAGGCATA TERM 3637 2923381 - 2923417 + G 71 -11 -2.91912 | gap 1, overlap 2923385 CCCGTGCCGGGTGCC GTGGTGGCGATGGTGGG TATC TCCATCATCGCCAT-AC TCTCTCCCTGGCTGC TERM 3638 2923385 - 2923414 + G 90 -15.1 -2.7035 | overlap 2923381 TGCCGGGTGCCGTGG TGGCGATGGTGGG TATC TCCATCATCGCCA TACTCTCTCCCTGGC TERM 3639 2923621 - 2923611 - g 72 -5.4 -4.57073 | opp_overlap 2923618 GATTCTGGTGAAAAA GATG GGA CATC GCACGCTGTTTCTCG ygjE 2923216 - 2924679 + | hypothetical protein ygjD 2925735 - 2924722 - | O-sialoglycoprotein endopeptidase TERM 3640 2924855 - 2924880 + g 84 -3.9 -5.243 | gap 1, overlap 2924853 GTACAAAACTCCGGA CGC-GCGTAGAA CAC TTCGCCGCGGCG TTTTTTCATCATTTC TERM 3641 2925118 - 2925106 - G 72 -5.5 -4.50976 | overlap 2925113 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 3642 2925654 - 2925669 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 3643 2925939 - 2925922 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 2925972 - 2926187 + | 30S ribosomal protein S21 TERM 3644 2926231 - 2926264 + F 82 -7.6 -4.62475 | overlap 2926235 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 3645 2926235 - 2926261 + F 95 -10.9 -4.40882 | gap 1, overlap 2926231 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 3646 2926748 - 2926733 - g 70 -3.9 -4.60487 | opp_overlap 2926747, overlap 2926747 CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCTCGCT TERM 3647 2927630 - 2927597 - g 70 -5.9 -4.20696 | opp_overlap 2927597 2927608, overlap 2927589 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 2926298 - 2928043 + | DNA primase TERM 3648 2929011 - 2928991 - g 73 -9.1 -3.60948 | GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTGCCG rpoD 2928238 - 2930079 + | RNA polymerase sigma factor RpoD TERM 3649 2930153 - 2930182 + T 89 -9.3 -4.59109 | overlap 2930155 CACCTTTTCGGTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3650 2930155 - 2930180 + T 100 -16.3 -3.90762 | overlap 2930153 CCTTTTCGGTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_2926 2931510 - 2930164 - | IS4 orf TERM 3651 2931525 - 2931500 - G 100 -9.8 -5.61596 | opp_overlap 2931500 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3652 2931500 - 2931525 + g 73 -9.1 -3.61398 | opp_overlap 2931500 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC ygjF 2932103 - 2931597 - | G/U mismatch-specific DNA glycosylase TERM 3653 2932336 - 2932315 - R 100 -14.5 -3.91597 | opp_overlap 2932315 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 3654 2932315 - 2932336 + r 100 -14.5 -5.71295 | opp_overlap 2932315 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT yqjH 2933121 - 2932357 - | hypothetical protein TERM 3655 2933305 - 2933274 - H 70 -10 -3.10715 | opp_overlap 2933284 GGCATCATTACTCAA CGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACGTGTGAGATGAG TERM 3656 2933541 - 2933575 + G 70 -4.9 -4.49556 | gap 1, overlap 2933542 GGTCAATGCTGCGGT GGTCGCC-ACGGTCGC GGCG GCGGTCGTCGGCAACG TTTCTTTGGTCACGG TERM 3657 2933996 - 2933981 - g 100 -3.3 -5.72622 | opp_overlap 2933988 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT yqjI 2933409 - 2934032 + | hypothetical protein TERM 3658 2934077 - 2934033 - T 74 -10.6 -3.1886 | opp_overlap 2934050, overlap 2934034 ACGCAACTGGATTAA TCGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACGC TTGACGCGCCTTATC TERM 3659 2934076 - 2934034 - T 83 -14.1 -2.50994 | opp_overlap 2934050, overlap 2934033 CGCAACTGGATTAAT CGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACG CTTGACGCGCCTTAT TERM 3660 2934121 - 2934152 + T 76 -11.6 -2.64099 | opp_overlap 2934130 2934132, overlap 2934120 CTACACACCCCGCAG GCCTGATAAGATGC GCCA GCATCGCATCAGGC ATTGTGCTCCAACCG TERM 3661 2934201 - 2934230 + T 82 -11.3 -3.57144 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA aer 2935706 - 2934186 - | aerotaxis sensor receptor, flavoprotein TERM 3662 2935435 - 2935452 + g 70 -4.1 -4.59773 | opp_overlap 2935429, overlap 2935420 CGCACCCAATAATGG TCGCC ATTTTTGC GGCGA TTTTTCACGATGCCG ygjG 2936096 - 2937502 + | putrescine--2-oxoglutarate aminotransferase TERM 3663 2937508 - 2937540 + T 100 -12.8 -4.82901 | opp_overlap 2937510, overlap 2937510 AGAAGCGTAATATCA AATCGGATGGCGAT ACGAC GTCGCCATCCGATC TTTTTATACGACGCG TERM 3664 2937538 - 2937510 - T 100 -14.7 -3.9344 | opp_overlap 2937510 2937508 AAGCGTAATATCAAA TCGGATGGCGA TACGACG TCGCCATCCGA TCTTTTTATACGACG TERM 3665 2937510 - 2937538 + T 100 -15.4 -4.03995 | opp_overlap 2937510, overlap 2937508 AAGCGTAATATCAAA TCGGATGGCGAT ACGAC GTCGCCATCCGA TCTTTTTATACGACG ygjH 2937876 - 2937544 - | hypothetical protein TERM 3666 2937739 - 2937752 + g 71 -2.3 -5.00884 | overlap 2937724 CGGCACCAGGCTGGT CACGG TTTG CAGTG TTTTTTCCCCCACAT TERM 3667 2939022 - 2939004 - g 95 -10.2 -4.72272 | opp_overlap 2939016 CTGGTGTATGAAAAA GCCCGCGA TGG TCGCGCGC TGCCGCTGTTAGTCT ebgR 2938095 - 2939078 + | DNA-binding transcriptional repressor EbgR TERM 3668 2939085 - 2939127 + F 84 -7.8 -4.73614 | gap 1, opp_overlap 2939092, overlap 2939086 2939087 ACCCGTTAAATCCCC TTACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC TERM 3669 2939086 - 2939126 + F 70 -9.1 -3.43084 | gap 1, opp_overlap 2939092, overlap 2939085 2939087 CCCGTTAAATCCCCT TACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCC GTTTATTTTCGTGAT TERM 3670 2939087 - 2939125 + F 78 -12.6 -2.64766 | gap 1, opp_overlap 2939092, overlap 2939086 2939085 CCGTTAAATCCCCTT ACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGC CGTTTATTTTCGTGA TERM 3671 2939119 - 2939092 - f 93 -15.7 -2.8806 | opp_overlap 2939087 2939086 2939085 AAATCCCCTTACACA CTGTCCGGCAA TCGTTT TTGCCGGACAG TGCTGCCGTTTATTT TERM 3672 2939402 - 2939414 + G 91 -7.7 -5.03314 | GCCCTTAAGCGGTCA GTGGA ATT TCCAC TTTTTTGACCATCCG TERM 3673 2940085 - 2940072 - g 75 -4.5 -4.74103 | opp_overlap 2940072 TTGGCAATTGAAAAA CTGAC CAGC GCCAG CTTTGCTTTTACTGT TERM 3674 2941225 - 2941203 - g 72 -7.6 -3.8647 | ACGCAGCAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTGCA ebgA 2939262 - 2942354 + | cryptic beta-D-galactosidase subunit alpha TERM 3675 2942769 - 2942781 + G 72 -7.7 -3.96216 | opp_overlap 2942769 2942766 2942765 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 2942351 - 2942800 + | cryptic beta-D-galactosidase subunit beta TERM 3676 2942837 - 2942801 - f 76 -8 -4.27512 | overlap 2942804 2942807 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCACCGCTA CCCTACACATTTTCG TERM 3677 2942834 - 2942804 - f 87 -9.7 -4.24183 | overlap 2942801 2942807 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCACCG CTACCCTACACATTT TERM 3678 2942831 - 2942807 - f 80 -12.2 -3.09866 | overlap 2942804 2942801 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCA CCGCTACCCTACACA TERM 3679 2943109 - 2943095 - g 72 -5.6 -4.56775 | ACGCGTGGGTAAAAA GTTCGC TGG GCGGAC GTTGGGCATTTATTA TERM 3680 2943864 - 2943852 - g 70 -4.7 -4.45664 | CGAACTGAACGAAAA CGGCG TTC CGGCG CGCGCAGCGTGGATC ygjI 2942863 - 2944296 + | putative oxidoreductase TERM 3681 2944321 - 2944357 + T 76 -8.3 -4.04922 | opp_overlap 2944316, overlap 2944323 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAATAG TTTCTGCCTTTATAT TERM 3682 2944323 - 2944354 + T 75 -11.1 -3.05274 | gap 1, opp_overlap 2944316, overlap 2944321 AAAAATGAGCAGGCA TTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAA TAGTTTCTGCCTTTA SBO_2938 2944752 - 2944480 - | putative IS1 encoded protein insB 2944827 - 2945330 + | IS1 ORF2 ygjJ 2945349 - 2946098 + | hypothetical protein TERM 3683 2946706 - 2946683 - f 76 -8.2 -4.15833 | gap 1 ACTATCAGCGCAAAA TCAGCGCCACC CGT GATGGC-CTGA AAGTCACCTTTGGCA TERM 3684 2948657 - 2948638 - f 73 -10 -3.30124 | overlap 2948648 2948649 CCGTAGGTCGGATAA GACGCGAC AAGC GTCGCATC CGGCATCTGCACCGC TERM 3685 2948691 - 2948649 - f 71 -10.4 -2.62003 | opp_overlap 2948688, overlap 2948638 2948648 ATAAGACGCGACAAG CGTCGCATCCGGCATCTGCA CCG CGCCACTGGCGGATGCGGCG TGAACGCCTTATCCG TERM 3686 2948996 - 2949017 + G 70 -5.1 -4.36914 | gap 1, opp_overlap 2948990 GGAGGAATACCCGGA CGGTGCCGAG CGG CT-GGCAGCG TTTTATGCCGAACGC ygjL 2948892 - 2950910 + | putative NADPH dehydrogenase TERM 3687 2950919 - 2950953 + T 70 -10.6 -2.50816 | overlap 2950918 GATTTAAATCGTTAT TTGAAGCGCCGGATGC AAC GCATCCGGCACGTCGC GTTAATCAATAAACA ygjM 2951371 - 2950955 - | hypothetical protein ygjN 2951682 - 2951368 - | hypothetical protein TERM 3688 2951952 - 2951921 - R 78 -12.2 -2.52795 | overlap 2951931 2951932 AACGTGCTGAACGTA GGCCGGATAAGGCG TTAA CGCCGCATCCGGCA GGTAACTCCCAATCT ygjO 2953103 - 2951967 - | putative enzyme TERM 3689 2952616 - 2952632 + g 74 -6.5 -4.58283 | CATGCCAGCGTGGTG GTGGTCG GGC CGAGCAC TTTTTCGAACAGTTC ygjP 2953152 - 2953691 + | hypothetical protein TERM 3690 2954197 - 2954181 - g 72 -5.2 -4.56775 | opp_overlap 2954187 AGTGCGTGCCAAAAA GGTTTT TGGTG AAAACC ATATCACCATTATCT ygjQ 2953768 - 2954451 + | hypothetical protein TERM 3691 2955301 - 2955283 - g 70 -3.8 -4.65895 | opp_overlap 2955283 CTGGTGATTGAAAAA CTGTCTGA ATG CCAGAAAG TGTGCTTCGTGCCGC ygjR 2954512 - 2955516 + | hypothetical protein TERM 3692 2955693 - 2955674 - f 83 -10.8 -3.66178 | opp_overlap 2955674 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 3693 2955674 - 2955693 + F 100 -10.8 -5.56673 | opp_overlap 2955674 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 3694 2955749 - 2955774 + F 100 -13.3 -6.06529 | opp_overlap 2955748 2955746 2955749 ATGCATAAAAAGCAG CGGCTGACGTC TTCC GACGTTGGCCG TTTTTTTTATGTGTA ygjT 2955800 - 2956765 + | putative transport protein ygjU 2957381 - 2958625 + | serine/threonine transporter SstT TERM 3695 2958634 - 2958658 + T 100 -12.1 -4.6468 | TAATTAATTGTTTAA CCCCTTTCGTC TAC GGCGGGAGGGG TTTTCTCTACTTTAA ygjV 2959181 - 2958630 - | hypothetical protein TERM 3696 2959213 - 2959237 + r 100 -10 -5.4505 | opp_overlap 2959213 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC TERM 3697 2959237 - 2959213 - R 95 -12.9 -4.21922 | opp_overlap 2959213 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC TERM 3698 2959440 - 2959466 + r 76 -8.7 -4.11216 | GCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA TERM 3699 2960197 - 2960224 + r 70 -10.6 -2.52519 | overlap 2960193 2960192 2960196 2960195 GCCTGCGTTCGGGTG GCGCACCATGTT TTGC AGCATGGTGCGG GTATTAATGTGATCG uxaC 2962178 - 2960766 - | glucuronate isomerase TERM 3700 2960985 - 2960964 - G 72 -7.9 -3.95787 | opp_overlap 2960965 2960977, overlap 2960977 CAGCATACCGACAAA GCGGCTCAG CAAA CCGAGCTGC GCCAGTTGGGTCATC TERM 3701 2963519 - 2963539 + G 72 -8.9 -3.83502 | overlap 2963505 2963523 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTGAACCTG TERM 3702 2963523 - 2963535 + G 73 -9.1 -3.59402 | overlap 2963505 2963519 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTGAA exuT 2962541 - 2963959 + | transport of hexuronates TERM 3703 2964010 - 2963979 - T 100 -24.6 -3.43564 | opp_overlap 2963979, overlap 2963960 TAACGTAAGTTATAA CGACGAAGCCGCCT TATC AGGCGGCTTCGTCG TTTATATAGAAAAAA TERM 3704 2963979 - 2964010 + T 100 -24.6 -4.03234 | opp_overlap 2963960 2963979 TAACGTAAGTTATAA CGACGAAGCCGCCT TATC AGGCGGCTTCGTCG TTTATATAGAAAAAA SBO_2955 2964679 - 2964047 - | putative minor pilin and initiator SBO_2956 2966050 - 2965133 - | outer membrane fimbrial user protein SBO_2957 2966681 - 2966025 - | IS2 ORF2 SBO_2958 2966930 - 2966727 - | IS2 ORF2 SBO_2959 2967802 - 2967329 - | putative fimbrial subunit TERM 3705 2967926 - 2967949 + r 76 -2.4 -5.28942 | overlap 2967928 GATATGCTTTCAAGA TTTCTTTCCT GACC AGGGAAGATG TTTTTATTTACGGTC TERM 3706 2967928 - 2967947 + r 74 -7.2 -4.27026 | overlap 2967926 TATGCTTTCAAGATT TCTTTCCT GACC AGGGAAGA TGTTTTTATTTACGG SBO_2960 2968548 - 2968204 - | putative fimbrial protein TERM 3707 2968479 - 2968464 - G 74 -7.6 -4.02334 | CAGCCATAGGATAAA CAGTCA TATT TGACTG TGCCAAAAAAGGAGC TERM 3708 2968522 - 2968509 - G 73 -3.7 -4.78753 | overlap 2968510 CGAACACGAATAAAA GCGGC GCAA GCCGT GATAAGAGATTAATT exuR 2968844 - 2969620 + | DNA-binding transcriptional repressor ExuR TERM 3709 2969634 - 2969653 + F 74 -10.7 -3.21199 | opp_overlap 2969623 GAAACTCCTGTCCGA CAGGCGC TGCGAC GCGCCTG TTCGCTTCGTCGGTA TERM 3710 2969911 - 2969895 - f 70 -5.1 -4.44819 | opp_overlap 2969907, overlap 2969897 CAGAACATACCAAAA CAGCAAT AAC ATTGCGG TAGTGCATCTTTTAA yqjA 2969965 - 2970627 + | hypothetical protein yqjB 2970631 - 2971014 + | hypothetical protein TERM 3711 2971077 - 2971104 + F 79 -10.6 -3.48924 | opp_overlap 2971077 2971078 2971080, overlap 2971078 2971081 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG TERM 3712 2971078 - 2971103 + F 76 -11.9 -2.6914 | opp_overlap 2971077 2971078 2971080, overlap 2971077 2971081 CTGTCTATGATTAAT GAGGCGGTGGT TAAC ACTACCGCTTC GTTGTCTGGACAATC TERM 3713 2971081 - 2971100 + F 75 -10 -3.49618 | opp_overlap 2971080 2971078 2971077, overlap 2971078 2971077 TCTATGATTAATGAG GCGGTGGT TAAC ACTACCGC TTCGTTGTCTGGACA yqjC 2971146 - 2971529 + | hypothetical protein yqjD 2971567 - 2971872 + | hypothetical protein yqjE 2971875 - 2972279 + | hypothetical protein TERM 3714 2972319 - 2972341 + G 71 -9.2 -3.54741 | opp_overlap 2972329 2972332 2972333 GCAACTGCTTAGCCA GATCCAGC AACAACG GCTGGATC TTTCCGCCAGTCGTC SBO_2967 2972269 - 2972568 + | hypothetical protein TERM 3715 2972736 - 2972719 - g 100 -4.1 -5.60993 | overlap 2972722 2972725 CCTTGCACAAAAAAA CAATCAG CAGC CTGAGTG GCGCAGTGGAGAGTA TERM 3716 2972733 - 2972722 - g 79 -4.4 -4.89054 | overlap 2972719 2972725 TGCACAAAAAAACAA TCAG CAGC CTGA GTGGCGCAGTGGAGA TERM 3717 2972992 - 2973002 + G 82 -3.2 -5.27335 | overlap 2972990 CTGCGGGCTTTACGC TGCT GAC GGCA TTTTTATTTCACAGC yqjF 2972664 - 2973146 + | hypothetical protein TERM 3718 2973174 - 2973191 + F 100 -11.3 -4.87626 | opp_overlap 2973174 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG TERM 3719 2973191 - 2973174 - f 100 -11.3 -5.37345 | opp_overlap 2973174 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG yqjG 2973244 - 2974119 + | putative transferase TERM 3720 2974142 - 2974125 - f 100 -11.3 -5.40072 | opp_overlap 2974125 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA TERM 3721 2974125 - 2974142 + F 74 -11.3 -2.8664 | opp_overlap 2974125 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA yhaH 2974412 - 2974777 + | putative cytochrome TERM 3722 2974791 - 2974813 + F 93 -10.6 -4.50583 | AAAACAAATCTGCTC GCCGGATG TCTGACT CATCCGGC TTTTATCATCATGTT yhaI 2975019 - 2975375 + | putative cytochrome TERM 3723 2975386 - 2975403 + T 100 -12.7 -5.07486 | opp_overlap 2975385 2975384 ATTAATCTTAGAATT GGGGCGA TATT TCGCCCC TTTTTATTAACAATA yhaJ 2976322 - 2975426 - | putative transcriptional regulator LYSR-type yhaK 2976427 - 2977128 + | hypothetical protein yhaL 2977145 - 2977315 + | hypothetical protein yhaNM 2978759 - 2977449 - | hypothetical protein TERM 3724 2978165 - 2978154 - G 75 -7.2 -4.35604 | opp_overlap 2978159 GGAATCGAGAATAAA GCGG ATCG CCGC AAACGGGACTTCATT TERM 3725 2979054 - 2979072 + r 73 -9.6 -3.35992 | opp_overlap 2979009 AATCTTCTCGGCAGG CATCTTGC GAC GCAGGATG TTCATTACGATCCCT TERM 3726 2979669 - 2979651 - R 70 -5.2 -4.52047 | overlap 2979655 TACCAGACCATAAAA GGGACTGT CTG ACAGCACC CCTTCCGTCACGCCG TERM 3727 2980368 - 2980351 - R 100 -11.3 -5.69473 | CAGATCACAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG TERM 3728 2980397 - 2980380 - R 80 -9.9 -3.84961 | overlap 2980392 CACCCAAGGATGAAA GCTGACA GCAA TGTCAGC CGCAGACCACTTTAA SBO_2977 2981763 - 2980393 - | putative L-serine deaminase TERM 3729 2981822 - 2981788 - R 75 -11.5 -3.05384 | gap 1, opp_overlap 2981801 2981802, overlap 2981802 TTGCCGTTCAGTGAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCTTTACGCACT yhaR 2982281 - 2981829 - | hypothetical protein tdcE 2984526 - 2982232 - | formate acetyltransferase 3 TERM 3730 2982722 - 2982744 + gr 70 -5.5 -4.33854 | GACTGGGTAGGGACG GCGTTGCGA TAGGT TGGCAGCGC TTTAATTTTCTTCAT TERM 3731 2983117 - 2983127 + gr 71 -6.8 -4.07687 | overlap 2983114 CAGCACGTCGTCCAT CAGC GGT GCTG TTTTCGGCCCGACCT TERM 3732 2984122 - 2984153 + gr 83 -8.8 -4.35461 | gap 1 ATATTCAAATTCACT GTCCATTTCACGGCC ATA GGC-GTGGAATGAAC TTTTAATCATATTAA TERM 3733 2984380 - 2984400 + gr 71 -9.7 -3.18239 | GGCAGGCGTCGCTTC GGCGAGGAA AGA TTCATCGCC TTCATACGGTGTATA tdcD 2985780 - 2984560 - | propionate/acetate kinase TERM 3734 2985594 - 2985624 + g 70 -11 -2.74144 | overlap 2985594 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA TERM 3735 2985594 - 2985625 + g 73 -9.4 -3.57263 | gap 1, overlap 2985594 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT tdcC 2987125 - 2985794 - | threonine/serine transporter TdcC tdcB 2988136 - 2987147 - | threonine dehydratase TERM 3736 2987199 - 2987220 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA tdcA 2989173 - 2988235 - | DNA-binding transcriptional activator TdcA tdcR 2989362 - 2989706 + | DNA-binding transcriptional activator TdcR SBO_2985 2990288 - 2989998 - | putative IS1 encoded protein insB 2990381 - 2990884 + | IS1 ORF2 TERM 3737 2991233 - 2991247 + F 75 -2.9 -5.23396 | CTTTTTTTCACCCGA TCATT TTAAT AATGA TTTTTATTGATTATT TERM 3738 2992215 - 2992189 - g 100 -2.5 -5.86061 | gap 1, overlap 2992193 TCTCATCAAAAAAAA CATATGATTACA TCGA TATAATCAT-TG AAGATTATGAAAATA SBO_2987 2991693 - 2992484 + | hypothetical protein TERM 3739 2992601 - 2992575 - g 72 -5 -4.66833 | overlap 2992576 TGGCAACCGCAAAAA TGCCTGATGCGC TAC GCTTATCAGGCC TACGCCATCTCTGCA SBO_2988 2992517 - 2992681 + | hypothetical protein TERM 3740 2992836 - 2992809 - T 100 -15 -4.07568 | opp_overlap 2992816, overlap 2992816 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAATCAGGTGAAA TERM 3741 2992816 - 2992829 + T 93 -9.5 -4.67353 | opp_overlap 2992809 2992816 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA TERM 3742 2992829 - 2992816 - T 100 -9.5 -5.0925 | opp_overlap 2992816, overlap 2992809 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA yhaD 2994398 - 2993253 - | glycerate kinase I TERM 3743 2994421 - 2994432 + r 74 -7.2 -4.34263 | opp_overlap 2994421 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 2995385 - 2994495 - | tartronate semialdehyde reductase TERM 3744 2995055 - 2995069 + g 77 -10 -3.57561 | overlap 2995049 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA TERM 3745 2995312 - 2995326 + g 73 -4.2 -4.81685 | opp_overlap 2995312 ACCACCAGCGAGTAA CCTGCT TTC AGAAGG TTTTTACTCATTGGT yhaF 2996185 - 2995415 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase TERM 3746 2996835 - 2996849 + r 85 -7 -4.9218 | TTGGGACCGCTTGCT GCCGCG CTG CCCGGC TTTTTGTGGTCCATA insB 2998038 - 2997535 - | IS1 ORF2 TERM 3747 2999410 - 2999423 + G 70 -4.5 -4.45544 | CGAGTTGCTGCACGA GTGGA AAAT TCCGC TTTTAATTCATCAAC SBO_2995 2998859 - 2999899 + | aldo-keto reductase TERM 3748 2999931 - 2999911 - T 100 -15.4 -3.62775 | overlap 2999900 ATGACCTGTTAATAA CGGGCGCG CGAAC CGCGCCCG AATCAGATCAGTGAT yqhA 3000433 - 2999939 - | hypothetical protein yghA 3000624 - 3001508 + | oxidoreductase TERM 3749 3001514 - 3001540 + TF 87 -14.5 -2.86539 | opp_overlap 3001514, overlap 3001493 3001511 TTTAGGTTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTGTGAATTCAC TERM 3750 3001540 - 3001514 - Tf 100 -13.8 -5.44119 | opp_overlap 3001493 3001514 3001511 TTTAGGTTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTGTGAATTCAC TERM 3751 3001702 - 3001671 - Tf 70 -10 -3.10164 | opp_overlap 3001681, overlap 3001643 GCATTGAGCACCTAA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACAAACGCACGAAG TERM 3752 3001745 - 3001771 + GT 72 -10.8 -2.78298 | overlap 3001744 GCAATAGATTTTGTA GGCCTGATGAGC GTA GCGCATCAGGCA ATTCTACTTTACTTC exbD 3002205 - 3001780 - | biopolymer transport protein ExbD SBO_2998 3001684 - 3001929 + | hypothetical protein exbB 3002946 - 3002212 - | biopolymer transport protein ExbB SBO_3001 3003094 - 3002939 - | hypothetical protein TERM 3753 3003195 - 3003185 - H 73 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 3754 3003338 - 3003326 - g 85 -6.9 -4.75174 | overlap 3003329 TATGGAAGCCAAAAA GCACG CGA CGCGC AATCGCGCCAATGGC metC 3003198 - 3004385 + | cystathionine beta-lyase TERM 3755 3004887 - 3004913 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT yghB 3004525 - 3005184 + | hypothetical protein TERM 3756 3005195 - 3005220 + TF 86 -11.9 -3.5486 | overlap 3005193 CCTGACGATTTTCCC CGTTCCCGG CTGCTGTA CCGGGAACG TATTTAATTCCCCTG yqhC 3006351 - 3005224 - | putative ARAC-type regulatory protein TERM 3757 3007220 - 3007205 - gH 75 -4.6 -4.8622 | CTGTGGAATGAAAAA CGCGAT ACCA AGCGCG CTAAGCTGCTGCAAT yqhD 3006317 - 3007480 + | putative oxidoreductase TERM 3758 3007567 - 3007538 - fH 77 -10.7 -3.36968 | opp_overlap 3007541, overlap 3007540 3007541 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 3759 3007565 - 3007540 - fH 83 -13.3 -3.25192 | opp_overlap 3007541, overlap 3007538 3007541 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 3760 3007541 - 3007564 + FH 100 -16.8 -3.25823 | opp_overlap 3007541 3007540 3007538 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 3761 3007564 - 3007541 - fH 95 -16.8 -2.54794 | opp_overlap 3007541, overlap 3007540 3007538 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3007585 - 3008412 + | 2,5-diketo-D-gluconate reductase A TERM 3762 3008424 - 3008454 + F 73 -7.4 -4.10429 | overlap 3008425 CTAACATGCAAATTC TCCCGGTGGCGGTA ATG TTCCGCTACCGGAC TTTTCAGAAATCATT TERM 3763 3008425 - 3008453 + F 75 -10.9 -3.05775 | overlap 3008424 TAACATGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT yqhG 3008612 - 3009538 + | hypothetical protein yqhH 3009589 - 3009846 + | putative outer membrane lipoprotein TERM 3764 3009882 - 3009855 - T 83 -2.5 -5.73339 | opp_overlap 3009857, overlap 3009856 3009857 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGTT ATAGGCTGTTTGCTA TERM 3765 3009880 - 3009857 - T 70 -9.5 -2.99311 | opp_overlap 3009857, overlap 3009856 3009855 AATGATAAAAAAATC CCCGGCAGC ATGTCA GTTGCCGGG TTATAGGCTGTTTGC TERM 3766 3009857 - 3009880 + T 82 -11.7 -3.38218 | opp_overlap 3009857 3009856 3009855 AATGATAAAAAAATC CCCGGCAGC ATGTCA GTTGCCGGG TTATAGGCTGTTTGC SBO_3009 3010511 - 3010239 - | putative IS1 encoded protein insB 3010586 - 3011089 + | IS1 ORF2 TERM 3767 3012053 - 3012075 + F 77 -10.6 -3.36492 | opp_overlap 3012047 3012046 CAAAAAAGCGTTTAC TGCCGCTG GTGCTGG CAGCGGCA TTATGCAGTTCACCG TERM 3768 3012591 - 3012571 - f 70 -9.8 -3.05596 | GAGCGCCTGACGGAA GTGATCCA GCGCG TGGATCAC GCGGGTAATCGCACC TERM 3769 3012705 - 3012678 - f 73 -4.1 -4.73388 | gap 1, overlap 3012690 3012691 AAGCCTGACGAAAAA CAGCGGCG-AGA ACCAG CCTGCGACGCTG AAATCTCAAATTGTC TERM 3770 3014308 - 3014321 + G 82 -3.1 -5.21709 | overlap 3014303 TGATGGAAGATCTCG GTTCT GCTG AGGAC TTTTTTACTCTCGCG TERM 3771 3014724 - 3014711 - g 75 -4.5 -4.83169 | overlap 3014712 3014715 ACTGCTGGACAAAAA CCAGG CCCG CCTGA CGCTGGAGCGTCTGG TERM 3772 3015267 - 3015255 - g 74 -2.6 -5.14163 | ACTGACGAAGAAAAA CGCC TGCTG GGCA TTACCGATGCGCGAA gspE 3014040 - 3015392 + | putative type II secretion protein TERM 3773 3016319 - 3016352 + G 77 -7.3 -4.57341 | overlap 3016309 TGCGTCTGCCCGTGA CGGGCCGTGTTGCGC GCGG GCTGAATACGGCGCG TTTTTCCCGCACATT gspF 3015532 - 3016755 + | putative type II secretion protein gspG 3016772 - 3017227 + | putative type II secretion protein gspH 3017264 - 3017731 + | putative type II secretion protein gspI 3017791 - 3018162 + | putative type II secretion protein TERM 3774 3018202 - 3018213 + G 77 -5.8 -4.67353 | TACTGGAAATGTTGG TGGC AATT GCCA TTTTTGCCTCGCTGG gspJ 3018195 - 3018758 + | putative type II secretion protein TERM 3775 3018996 - 3019014 + G 72 -7.3 -4.23213 | TGCATCTGGCACAGC CGTGGGC ATCCG GCCCTCG TTTCTTCCCTCTGCC TERM 3776 3019611 - 3019593 - g 73 -3.8 -4.81752 | AAAAACAGCTAAAAA CCGTCC TGAGCGT GGACAG CAATTACTTCTGGCT gspK 3018827 - 3019738 + | putative type II secretion protein TERM 3777 3020665 - 3020644 - g 71 -2.3 -5.00884 | overlap 3020646 ATGGCGCTGAAAAAA TATCGCC CACAGGCC GACGATA CCCGGCTGCTCGCCG gspL 3020053 - 3020913 + | GspL-like protein gspM 3020915 - 3021451 + | putative general secretion pathway protein YghD TERM 3778 3021505 - 3021479 - T 80 -6.7 -4.73613 | opp_overlap 3021482 TTAGTATCAATAAAA TTACTCTCG TTAACGTGG CGAGAGTAA TTCCCCCAGACTTTA TERM 3779 3021591 - 3021563 - T 79 -11.8 -3.13773 | opp_overlap 3021569, overlap 3021569 TGTCAGATCCAAAAG CAAAAACCCGCC TTGTG GGCGGGTTCTTA AGAATTAGTGGTGCC TERM 3780 3021585 - 3021569 - T 100 -10.8 -5.10154 | opp_overlap 3021569, overlap 3021563 ATCCAAAAGCAAAAA CCCGCC TTGTG GGCGGG TTCTTAAGAATTAGT TERM 3781 3021569 - 3021585 + T 82 -11.5 -3.65581 | opp_overlap 3021569 3021563 ATCCAAAAGCAAAAA CCCGCCT TGT GGGCGGG TTCTTAAGAATTAGT TERM 3782 3021633 - 3021649 + T 73 -10.9 -2.62616 | opp_overlap 3021632 3021630 3021627 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yqgA 3022479 - 3021781 - | putative transport protein TERM 3783 3022668 - 3022683 + r 71 -7.6 -3.92005 | TCTCTCGCTTATCGC CGTTTC GCGC GAAACG TTTCCCTTTCTATGT TERM 3784 3022773 - 3022743 - R 73 -9.9 -3.41602 | opp_overlap 3022742 3022745 3022752 CTCACTGCAGGACAA CAGTAAAATCAGA GCGTT TCTGCTTTTACTG ATGTCTGGCGGTCGG TERM 3785 3022857 - 3022867 + r 72 -8.2 -3.69354 | CGGTATTCTTACTTC CCCG AAA CGGG TTTGCGCTTATGAAA TERM 3786 3023035 - 3023056 + r 85 -7.3 -5.0916 | overlap 3023022 TGCGTTGCTTAAGCG CACCGGT TTTCATCT ACCGGTG TTTTTGTATTCCGAA TERM 3787 3023284 - 3023269 - R 80 -6.8 -4.56597 | opp_overlap 3023269 TGCGTTTTTTAAAAA GCATCC TGCC GGACGC CATTTTTACGATTTC TERM 3788 3023960 - 3023949 - R 79 -3 -5.29782 | CAGATCCATAAAAAA GATA ACCA TATC CGCGGACAGGCGCGT TERM 3789 3023961 - 3023974 + r 72 -5.2 -4.57569 | overlap 3023971 AAAGATAACCATATC CGCG GACAGG CGCG TTTTTGCCCGCATAA TERM 3790 3024692 - 3024681 - R 74 -3.6 -4.92363 | AAAGACCTACAAAAA GCGA TGTT CCGC CAGCAGAGTTTCCCG SBO_3025 3026136 - 3025009 - | putative transposase TERM 3791 3025191 - 3025211 + g 100 -5.3 -5.47159 | overlap 3025171 3025168 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG TERM 3792 3026564 - 3026525 - R 100 -15.2 -3.81146 | opp_overlap 3026534, overlap 3026534 GTGTTGAAGTAAGAA TAAAAAAAACGGGTCACC TTCT GGCGACCCGTTTTTCTTT GCGTAATTAGTGGCT TERM 3793 3026534 - 3026555 + r 100 -11.5 -5.30616 | opp_overlap 3026534 3026525 TAAGAATAAAAAAAA CGGGTCACC TTCT GGCGACCCG TTTTTCTTTGCGTAA TERM 3794 3026555 - 3026534 - R 100 -13.7 -6.22691 | opp_overlap 3026534, overlap 3026525 TAAGAATAAAAAAAA CGGGTCACC TTCT GGCGACCCG TTTTTCTTTGCGTAA nupG 3027875 - 3026571 - | NupG TERM 3795 3027995 - 3028018 + r 70 -10.3 -2.51471 | overlap 3027994 TGTGGATAACATTTT TGCCCCTGA GCATCG TCAGGGGCG GTTAATGGAATTATC mltC 3029111 - 3028029 - | murein transglycosylase C TERM 3796 3029142 - 3029169 + r 93 -6.3 -5.8096 | gap 1, opp_overlap 3029144, overlap 3029145 3029146 TGTTTGTTTTTATGC AAGTTGCCGGAG GCGTG CTCCGGC-ACTG TTTTTATTTTTTATC TERM 3797 3029145 - 3029167 + r 86 -9.1 -4.48934 | opp_overlap 3029144, overlap 3029142 3029146 TTGTTTTTATGCAAG TTGCCGGAG GCGTG CTCCGGCAC TGTTTTTATTTTTTA TERM 3798 3029146 - 3029166 + r 81 -12.6 -3.257 | opp_overlap 3029144, overlap 3029145 3029142 TGTTTTTATGCAAGT TGCCGGAG GCGTG CTCCGGCA CTGTTTTTATTTTTT yggX 3029448 - 3029173 - | hypothetical protein TERM 3799 3029266 - 3029286 + g 73 -4 -4.78981 | overlap 3029259 AAGCAGCTTGCGGTG CTCGGCAT TCATC ATGTTGAG TTTCTTTTCATTAAT mutY 3030528 - 3029476 - | adenine DNA glycosylase TERM 3800 3029700 - 3029723 + g 70 -6 -4.24342 | gap 1, opp_overlap 3029694, overlap 3029700 CGGCAGCAATCTGCC GT-TGCGCCAG CCA CTGCCGCAAAC TTTCTTCGTCGGCAA TERM 3801 3029848 - 3029827 - G 71 -2.8 -4.87626 | opp_overlap 3029827 3029837, overlap 3029830 CTGTAACAGCAAAAA GTAGCCGG TGCGCT CCGGCAGC GTCTGTTTCGGTTTT trmB 3030689 - 3031408 + | tRNA (guanine-N(7))-methyltransferase yggL 3031408 - 3031734 + | hypothetical protein TERM 3802 3031874 - 3031897 + F 100 -8.8 -5.4505 | overlap 3031877 ACTTTGTTATCAATC TGGGGCCAGC AAAT GCTGGCCTGA TTTTTTCTTGAGGGA TERM 3803 3031877 - 3031894 + F 88 -12.7 -3.5087 | overlap 3031874 TTGTTATCAATCTGG GGCCAGC AAAT GCTGGCC TGATTTTTTCTTGAG TERM 3804 3031947 - 3031931 - g 74 -8 -4.12188 | opp_overlap 3031931 3031930 CTATGATGCGCAAAA TGCTGC TGGCG GCAGCA CTTTCAGTGACGGCA TERM 3805 3031989 - 3032011 + G 73 -12 -2.82623 | overlap 3031986 3031991 CGCCGACTACCAGTG CAGCGTCACG CCG CGTGACGATG TGATTGTCAGCCCGC TERM 3806 3032560 - 3032541 - g 77 -6.4 -4.63184 | opp_overlap 3032540 AACCGAGTGGAAAAA GCAGGAAA AAGA TTTCCAGC AGTTTGGCAAAGATG yggN 3031918 - 3032637 + | hypothetical protein TERM 3807 3032653 - 3032675 + F 79 -9.2 -4.12315 | opp_overlap 3032653 TCCTCTATTTTAAGA CGGCATAATA CTT TTTTATGCCG TTTAATTCTTCGTTT ansB 3032813 - 3033859 + | L-asparaginase II TERM 3808 3033867 - 3033887 + F 100 -11.1 -4.74103 | AGTACTAATCACCTC GCTCCGGTA TCG TGCCGGGGC TTTTTCACTTCAGAC TERM 3809 3034098 - 3034086 - g 71 -3.3 -4.76892 | opp_overlap 3034086 AGATCAATTCAAAAA GCAGT ATC ACGGC ATTCTCAAGCTTGAT yggM 3033976 - 3034983 + | putative alpha helix chain TERM 3810 3035076 - 3035045 - T 76 -11.6 -2.60392 | opp_overlap 3035054, overlap 3035044 CATCCGGCAATCAAC GTCTGATGCGACGC TTGC GCGTCTTATCAGAC CTACAACCGTTGCCA yggW 3036274 - 3035138 - | coproporphyrinogen III oxidase yggV 3036860 - 3036267 - | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 3811 3036511 - 3036537 + g 74 -10.1 -3.48657 | opp_overlap 3036497 3036511, overlap 3036509 3036502 AGCACGCAGTGGAAA CGTGCCTGACG TTGGT CGTCCGGTACG TCTTTCAGTGTTTCC TERM 3812 3036624 - 3036601 - G 77 -10.2 -3.65046 | overlap 3036616 TCTTCACCGGAATAA CGCGCGGAGT AAAT ACCCGGCGCG CCACCCAGCGCATCT TERM 3813 3036807 - 3036792 - G 78 -9 -3.96093 | GATATCAAGACCAAA GTCGCT AAGC AGCGAC GCCAGCTCACGCACT yggU 3037158 - 3036868 - | hypothetical protein TERM 3814 3036933 - 3036948 + g 70 -3.9 -4.65895 | TTTTAATTTGTTTGT GGCGG CCAAGT TCGCC TTTTTCAATCACCAC yggT 3037721 - 3037155 - | putative resistance protein yggS 3038443 - 3037739 - | hypothetical protein TERM 3815 3037803 - 3037816 + gH 71 -9.5 -3.14468 | ACCATCGTGCTACCT GCCGC AATG GCGGC TTCCATATCGTCCGA TERM 3816 3038163 - 3038175 + gH 72 -4.7 -4.65916 | opp_overlap 3038158, overlap 3038161 3038173 CAGTCGAAATGCTCT GCCAC CAG GCGGC TTTTATTAGACTGCA TERM 3817 3038310 - 3038329 + gH 83 -5.7 -5.13722 | overlap 3038311 CCGGCATCAATGGCT TCTGCGA TGGCGC TCGCAGG TTTTGTTTTACTGAC TERM 3818 3038394 - 3038373 - GH 83 -12.3 -3.28791 | ATTTCTTCTGGAGAA CGGCCGCAA CGCG TTGCAGCCG CTGAGATTTTGTCCC yggR 3038416 - 3039441 + | putative protein transport TERM 3819 3039524 - 3039491 - TR 79 -8.1 -4.30933 | opp_overlap 3039501, overlap 3039492 TATAAAGGCAATAAA TGTCTGATGCGACGC TAAC GCGTCTTATCAGACC TACAGCCGCTGCCAG TERM 3820 3039523 - 3039492 - TR 79 -11.6 -3.17475 | opp_overlap 3039501, overlap 3039491 ATAAAGGCAATAAAT GTCTGATGCGACGC TAAC GCGTCTTATCAGAC CTACAGCCGCTGCCA yqgF 3040033 - 3039617 - | Holliday junction resolvase-like protein TERM 3821 3039662 - 3039679 + g 76 -7.7 -4.15044 | opp_overlap 3039655 AATAATAACCGCAGA GGCAGAG TCGA CTTTGCC TTTGTTGAGCGCCCG yqgE 3040596 - 3040033 - | hypothetical protein TERM 3822 3040668 - 3040628 - R 70 -2.3 -5.00616 | TCCTGGTTCAAAAAA GCAACAGCGCCCAGTATGC GTG GAAAGAAGGGCGCTGTCAC TCAGAGTCTCAACGA gshB 3041655 - 3040705 - | glutathione synthetase TERM 3823 3040766 - 3040746 - G 74 -11.2 -3.1552 | opp_overlap 3040744, overlap 3040744 TGGCATCCATTAACA TTCCGGTG ATCGA CACCGGAA ACTCTGCTTCAATCT yggJ 3042399 - 3041668 - | hypothetical protein TERM 3824 3042431 - 3042409 - R 72 -4.7 -4.71061 | opp_overlap 3042410, overlap 3042410 ACGCATAGTTAAAAA TCCGCGTCG TCTCC CCACGCGGT TGTACGCGTGGGGTA endA 3043186 - 3042479 - | DNA-specific endonuclease I TERM 3825 3042690 - 3042706 + g 87 -4.3 -5.28942 | opp_overlap 3042659, overlap 3042675 GCACCGCGTGCACGC GCTGGTG GTT CGGCAGC TTTTTCTTTGAAATC sprT 3043778 - 3043281 - | hypothetical protein galP 3045249 - 3043855 - | galactose-proton symport of transport system TERM 3826 3045330 - 3045311 - R 78 -6.5 -4.68994 | overlap 3045329 AGTACGACGTAAAAA GATGTGA AGCAAA TCACATC AGTGTAATCGCTTAC TERM 3827 3045644 - 3045662 + r 86 -11.7 -3.53444 | opp_overlap 3045644 GAGGTAAAAGAAAAA GGCCAGC GCGAG GCTGGCC TTTGAAAGCAGGTGA TERM 3828 3045662 - 3045644 - R 100 -11.7 -5.48213 | opp_overlap 3045644 GAGGTAAAAGAAAAA GGCCAGC GCGAG GCTGGCC TTTGAAAGCAGGTGA TERM 3829 3045699 - 3045728 + r 72 -2.7 -5.00616 | gap 1, overlap 3045706 ATTACTTCAGACCGG CAG-CATCGCGCAG CAG CTGCGCTTTGTCGG TTTTTTCCCACGGGA TERM 3830 3045706 - 3045720 + r 89 -11.4 -4.11869 | overlap 3045699 CAGACCGGCAGCATC GCGCAG CAG CTGCGC TTTGTCGGTTTTTTC metK 3046839 - 3045685 - | S-adenosylmethionine synthetase TERM 3831 3045764 - 3045776 + g 72 -5.5 -4.57482 | opp_overlap 3045764 TCACGACCAAAGTGA CCGTA TGC TGCGG TTTCTTTGTAGATCG TERM 3832 3046363 - 3046375 + g 91 -9.1 -4.59853 | GTCCGGGCGCAGCCA CGGCA GAG TGCCG TTTTTACGCACTTCA TERM 3833 3047140 - 3047130 - R 79 -8.2 -4.36914 | TTGTGGGGTATAAAA CGCG GCG CGCG GCTTAAATAAAAAGC TERM 3834 3047178 - 3047154 - R 76 -2.2 -5.27335 | gap 1, overlap 3047157 CGGCTTAAATAAAAA GC-ACACGA CGTTTCTT TCGTGTTGC CACTTCCAGCCGGGT yqgC 3047358 - 3047143 - | hypothetical protein TERM 3835 3047417 - 3047434 + H 81 -8.5 -4.52703 | opp_overlap 3047409 3047429, overlap 3047429 GACTGAACAAGGGCG CTCTTGT AAAA ACAAGAG TTTTCTCGTGGTTTC yqgB 3047479 - 3047625 + | hypothetical protein TERM 3836 3049305 - 3049315 + G 81 -6.8 -4.59342 | overlap 3049296 GATCCAGAGAATCCG CCGA TGC TCGG TTTCTTTATGGTCGG speA 3047634 - 3049610 + | arginine decarboxylase TERM 3837 3049679 - 3049711 + F 100 -14.9 -5.71712 | opp_overlap 3049679 3049674 TTGTGACAAATCCAA CCCTTCCTCGTCG GGCCTAA CGACGCGGAAGGG TTTTTTTATATCGAC TERM 3838 3049711 - 3049679 - f 93 -14.9 -3.32997 | opp_overlap 3049679, overlap 3049674 TTGTGACAAATCCAA CCCTTCCTCGTCG GGCCTAA CGACGCGGAAGGG TTTTTTTATATCGAC TERM 3839 3049787 - 3049799 + G 77 -3.4 -5.03314 | opp_overlap 3049780 ATAACTCACTGGTTT CCAA CGCCT TTGG TTTTTTACGCCTGCC speB 3049747 - 3050667 + | agmatinase TERM 3840 3050707 - 3050738 + T 70 -10.8 -2.52464 | opp_overlap 3050707, overlap 3050717 AAAACGTGCCATTAA TGTCGGATGCGGCG TGAA CGCCTTATCCGACC TACGTTCGGCACCCG yggG 3051757 - 3050873 - | hypothetical protein TERM 3841 3052214 - 3052198 - g 83 -10.1 -4.13945 | opp_overlap 3052198, overlap 3052199 AGCTGCACTCTAAAA CTCCGGG CCA CCCGGAA GTGGGTTACACCGCT TERM 3842 3052213 - 3052199 - g 75 -11.4 -3.08046 | opp_overlap 3052198, overlap 3052198 GCTGCACTCTAAAAC TCCGGG CCA CCCGGA AGTGGGTTACACCGC tktA 3051909 - 3053900 + | transketolase TERM 3843 3053935 - 3053920 - f 93 -10.4 -4.57073 | opp_overlap 3053920 CATTTCGGGTAAAAA GGTCGC TTCG GCGACC TTTTTTATTACCTTG TERM 3844 3053920 - 3053935 + F 100 -10.4 -5.5074 | opp_overlap 3053920 CATTTCGGGTAAAAA GGTCGC TTCG GCGACC TTTTTTATTACCTTG cmtB 3054214 - 3054657 + | putative mannitol phosphotransferase subunit EIIA cmtA 3054685 - 3056073 + | PTS system mannitol-specific enzyme II component, cryptic SBO_3057 3056376 - 3057365 + | putative oxidoreductase TERM 3845 3057420 - 3057401 - g 87 -13.6 -3.05384 | overlap 3057403 TTTCGCGTTACGGAA CAGGCAGC GTTG GCTGCCTG GCCGCAAACCGGATG TERM 3846 3057491 - 3057453 - g 82 -2.5 -5.35224 | overlap 3057455 3057457 GCGACAAAAATAAAA TTGATGGCCTGGCG-GTCA CCG CGATGCGCCAGG-CATTAA ACGACGTCGCTTTTC yggF 3057362 - 3058327 + | fructose-1,6-bisphosphatase II-like protein yggD 3058349 - 3058858 + | putative DNA-binding transcriptional regulator frcK 3058855 - 3059568 + | putative fructose transport system kinase SBO_3061 3060250 - 3059540 - | putative ATP-binding protein of ABC transport system TERM 3847 3059636 - 3059613 - GT 83 -9.6 -4.11805 | opp_overlap 3059609 ACCACACGAGAGAAA TGACGCCG GGTAAATG CGGCGTCA TGACTGATTGCTACC TERM 3848 3059989 - 3060002 + gT 78 -5.2 -4.7657 | opp_overlap 3059977, overlap 3059988 GTACGCCAACCTTTG CCGC GCGCTG GCGG TTTTTCAGGTTTTTC SBO_3062 3060888 - 3060211 - | putative ATP-binding protein of ABC transport system TERM 3849 3060448 - 3060462 + gr 70 -10 -3.03124 | GACCACGCGCTGTGT CTCTCC ACC GGAGAG TGTTGCCGGGTGACG SBO_3063 3061583 - 3060876 - | hypothetical protein SBO_3064 3062162 - 3061584 - | putative inner membrane protein TERM 3850 3061931 - 3061882 - G 71 -9.3 -3.51411 | gap 2, overlap 3061878 AGGGTGCGAAACCAA CCCGCTCGCGCCAGCCAACCGGC GACCAG GCCGA-TGACCATCGCGA-CGGG TGCAAATGCGGCGGC SBO_3065 3062616 - 3062185 - | hypothetical protein TERM 3851 3062563 - 3062544 - G 74 -2.8 -5.02074 | gap 1, overlap 3062546 GTAGCTGGGAAAAAA CTTCCTGCC CGG GG-AGGAGG CGCAGTGCGTAAAAG epd 3062988 - 3064007 + | erythrose 4-phosphate dehydrogenase pgk 3064057 - 3065220 + | phosphoglycerate kinase TERM 3852 3065251 - 3065225 - f 90 -7.3 -5.37865 | gap 1, opp_overlap 3065230, overlap 3065226 3065230 CTAAGAAGTAAAAAA TCACAGGGCAGG GAAA CCTGCCCT-TGT TTCAGCGCGCTTTTA TERM 3853 3065250 - 3065226 - f 83 -10.8 -3.81092 | gap 1, opp_overlap 3065230, overlap 3065225 3065230 TAAGAAGTAAAAAAT CACAGGGCAGG GAAA CCTGCCCT-TG TTTCAGCGCGCTTTT TERM 3854 3065247 - 3065230 - f 81 -12.7 -3.27687 | opp_overlap 3065230, overlap 3065226 3065225 AAGTAAAAAATCACA GGGCAGG GAAA CCTGCCC TTGTTTCAGCGCGCT TERM 3855 3065230 - 3065247 + F 95 -12.7 -3.90922 | opp_overlap 3065230 3065226 3065225 AAGTAAAAAATCACA GGGCAGG GAAA CCTGCCC TTGTTTCAGCGCGCT TERM 3856 3065255 - 3065275 + F 75 -3.1 -5.20216 | overlap 3065256 ACCTGCCCTTGTTTC AGCGCGCTT TTA GAGCACGCA TTTTTTCATACTCTA fba 3065435 - 3066514 + | fructose-bisphosphate aldolase TERM 3857 3066539 - 3066555 + F 100 -11.5 -5.40072 | TTCTGCTTATCTCAA GGCCCGC TCT GCGGGTC TTTTTTTCGCCAAAA TERM 3858 3066614 - 3066637 + F 76 -4.7 -4.82901 | gap 1 CAGGCCTACACGTAT CCTGCAATAT ATTGA AT-TTGCAGG TTTTTGTAGGCCGGA TERM 3859 3066707 - 3066723 + F 100 -9.3 -5.00616 | overlap 3066708 TTGATATCTGTCTGA GCCCCGC TCT GCGGGGA TTTTTTCGCCAAAAG TERM 3860 3066708 - 3066722 + F 88 -12.8 -3.60048 | overlap 3066707 TGATATCTGTCTGAG CCCCGC TCT GCGGGG ATTTTTTCGCCAAAA yggB 3066872 - 3067732 + | mechanosensitive channel MscS TERM 3861 3067741 - 3067766 + F 82 -11.9 -3.31932 | opp_overlap 3067738, overlap 3067739 TGCGTAATCAACGCT GAGGCCAGATA ATAC TCTCTGGCCTC TCTCTTATTAGTTAT yggA 3067871 - 3068506 + | arginine exporter protein yggE 3068599 - 3069339 + | hypothetical protein TERM 3862 3069372 - 3069342 - T 79 -10.5 -3.50808 | gap 1, opp_overlap 3069341 3069340 3069345 3069362, overlap 3069340 TGCAGCACAATAATA CTTGTAGCCCGACG TATT CGTCGGGCTA-ATG CCTTTACCCGATATT TERM 3863 3069345 - 3069370 + T 81 -13.3 -2.64472 | opp_overlap 3069342 3069340, overlap 3069341 3069340 3069362 AGCACAATAATACTT GTAGCCCGACG TATT CGTCGGGCTAA TGCCTTTACCCGATA SBO_3072 3070723 - 3069527 - | ISSfl2 ORF TERM 3864 3069580 - 3069552 - G 71 -3.2 -4.82901 | TGCGGGGTATAAAAA GTCCCG-TCGCGCA TCA TG-GCGAACAGAAC GTCGCAGCGTCGTCT TERM 3865 3071063 - 3071038 - g 84 -3.9 -5.24129 | opp_overlap 3071047, overlap 3071039 GGGCGGCAGAAAAAA TCCATATGACG GCTT CGCCATTTGGT AAAAGCATTGCCGCG TERM 3866 3071848 - 3071792 - g 79 -12.6 -3.0682 | TTCAATCAGAAATCA TCG-TTATACCGCCACGATGCTTCAGCA TAT TGCTGAAG-ATCGTGACGGGACAAACCA TTAACCCAGCATCGA ygfI 3070956 - 3071852 + | putative transcriptional regulator LYSR-type ygfH 3073327 - 3071849 - | putative coenzyme A transferase ygfG 3074136 - 3073351 - | methylmalonyl-CoA decarboxylase ygfD 3075142 - 3074147 - | arginine/ornithine transport system ATPase TERM 3867 3074804 - 3074792 - G 72 -6.9 -4.1552 | overlap 3074793 TACCGGGCGAATAAA CGCCG CTT CGGCA CGCGCCAGGTCATTC TERM 3868 3076409 - 3076399 - R 71 -6.8 -4.06419 | TCGCTCCATAAATAA CGTG CCG CACG CAACATGGCGACGTT TERM 3869 3076806 - 3076785 - R 74 -5.9 -4.57353 | gap 1, overlap 3076786 GGCGACGATATAAAA CGCCAGTACT GGT AGCACTG-CG CCATTCATGGTCATC TERM 3870 3077449 - 3077469 + r 70 -9.8 -3.0082 | opp_overlap 3077448 3077449, overlap 3077448 AGAAGTGAGGACAAC GCCTGATA TGTGC TATCAGGC ATTATTTGATGGATT iciA 3078376 - 3077483 - | chromosome replication initiation inhibitor protein TERM 3871 3078158 - 3078181 + g 72 -4.4 -4.70626 | overlap 3078160 TTCTTCCAGCAACTC CACCTGGCGC AGCA GTGCCAGCAG TTTTTGCCCTTGTTC TERM 3872 3079332 - 3079310 - g 72 -7 -4.20531 | GATAGCGATGGAAAA CGCCATAAAT GCG ATTCCTGGCG TGGTGACTGTTGGCT rpiA 3078759 - 3079418 + | ribose-5-phosphate isomerase A TERM 3873 3079445 - 3079419 - f 77 -11.6 -2.91873 | opp_overlap 3079412 3079410, overlap 3079416 ACCATTGTGAAATGA TCTGACGGGGGA ACC TCCCCCGTTAAA AAAATTCTCTTCATT TERM 3874 3079589 - 3079607 + F 79 -3.2 -5.27399 | overlap 3079592 TCGCGACGCAAACGT TCATATTG CCG CAATATTA TTTTTTGATATGTTG TERM 3875 3079592 - 3079604 + F 72 -4.9 -4.69962 | overlap 3079589 CGACGCAAACGTTCA TATTG CCG CAATA TTATTTTTTGATATG TERM 3876 3080241 - 3080228 - g 72 -4.5 -4.70515 | overlap 3080229 3080230 GATATTGAAAATAAA CTGCC GCTG GGCAA CGCCACTCAGGTACA serA 3079673 - 3080905 + | D-3-phosphoglycerate dehydrogenase TERM 3877 3080953 - 3080923 - T 76 -8.2 -4.07568 | opp_overlap 3080927, overlap 3080927 CCCCTTCTCTGAAAA TTAACGGGCAGGTC ACT GACTTGCCCGTTTT TTTATCCCTTCTCCA TERM 3878 3080927 - 3080949 + T 100 -15.6 -5.66684 | opp_overlap 3080927 3080923 TTCTCTGAAAATTAA CGGGCAGGTC ACT GACTTGCCCG TTTTTTTATCCCTTC TERM 3879 3080949 - 3080927 - T 95 -13.4 -3.66908 | opp_overlap 3080927, overlap 3080923 TTCTCTGAAAATTAA CGGGCAGGTC ACT GACTTGCCCG TTTTTTTATCCCTTC TERM 3880 3081117 - 3081098 - T 86 -11.4 -3.66178 | overlap 3081080 GGCTGTAACGGTAAA GCCCTCAC CGAA GCGAGGGC TTAAAGGAGAAGGGT TERM 3881 3081264 - 3081304 + T 78 -6.2 -4.7254 | gap 2, opp_overlap 3081263 3081256 3081272, overlap 3081264 3081265 CAAAGAATCAACGAT GT-C-AATCAGGGCGATGCG GGG TGCATCGCCCTGAACCGAAC TTTTTGATAGCCACT TERM 3882 3081294 - 3081272 - T 86 -14.9 -2.74488 | opp_overlap 3081265 3081264 3081264, overlap 3081263 3081256 CAACGATGTCAATCA GGGCGATGC GGGGT GCATCGCCC TGAACCGAACTTTTT TERM 3883 3081509 - 3081490 - T 86 -11.4 -3.66178 | GGCTGTAACGGTAAA GCCCTCAC CGAA GCGAGGGC TTGAAGGAGAAGGGT ygfA 3082234 - 3081686 - | putative ligase TERM 3884 3081863 - 3081840 - G 74 -3 -4.91109 | overlap 3081841 3081844 GTCCGATCATAAAAA CCACCGCCCA TTCC CAGGCGCTGA CCGTACTCATCAAAG ygfE 3082863 - 3082534 - | Z-ring-associated protein TERM 3885 3082637 - 3082656 + g 77 -3.4 -5.08601 | overlap 3082636 TGTTCCATACTTGCC GCGTAGTC ACGA GTCTTCGC TTTTTCTTGCGCTAA ygfB 3083031 - 3083609 + | hypothetical protein TERM 3886 3083702 - 3083716 + G 75 -5.6 -4.72272 | opp_overlap 3083698 3083693, overlap 3083698 3083697 3083703 AGCAAATGCAACCCG GCAGCG CCG CGCTGA TTTTTGCTGCACCAG TERM 3887 3083703 - 3083715 + G 71 -9.1 -3.43042 | opp_overlap 3083698 3083693, overlap 3083698 3083697 3083702 GCAAATGCAACCCGG CAGCG CCG CGCTG ATTTTTGCTGCACCA pepP 3083635 - 3084960 + | proline aminopeptidase P II ubiH 3084957 - 3086135 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 3888 3086758 - 3086746 - g 73 -9.1 -3.67775 | opp_overlap 3086749 ATTCGCACGGAAGAA CCGCA TGA TGCGG TGGCGCGGCAGGTTT visC 3086158 - 3087360 + | hypothetical protein TERM 3889 3087404 - 3087427 + F 93 -10.3 -4.39386 | overlap 3087423 CCCATCACACTTTCA TCTCCCGGT TTTTTC GCCGGGAGA TTTTCCTCATTTGAA TERM 3890 3087481 - 3087491 + F 79 -2.6 -5.40004 | overlap 3087469 TCGCATTATATTTTC TAAT GTC ATTA TTTTTTGATTTAGTG TERM 3891 3087612 - 3087624 + F 74 -3.3 -5.03314 | GGTTTTTTATTCTGT CGCGA TTT TGGCG TTTTTTAACCATAAG gcvT 3087807 - 3088901 + | glycine cleavage system aminomethyltransferase T gcvH 3088925 - 3089314 + | glycine cleavage system protein H TERM 3892 3091926 - 3091909 - g 74 -6.3 -4.56978 | gap 1, opp_overlap 3091908 CGCTGAAAGAAGAAA CCAGCATC AGC GA-GCTGG ATATTGCCAAGCGCC gcvP 3089433 - 3092306 + | glycine dehydrogenase TERM 3893 3092332 - 3092345 + T 100 -9.5 -4.7373 | opp_overlap 3092332 CGACTATTTTCTAAA GGCGC TTCG GCGCC TTTTTAGTCAGATGA TERM 3894 3092345 - 3092332 - T 75 -9.5 -3.56092 | opp_overlap 3092332 CGACTATTTTCTAAA GGCGC TTCG GCGCC TTTTTAGTCAGATGA TERM 3895 3092695 - 3092676 - T 76 -5 -4.75219 | gap 1, overlap 3092677 TAATTATCAACAAAA CCTCCATGC GGC GCA-GGAAG TGGTGAACTTAATCA TERM 3896 3093332 - 3093362 + T 74 -10.6 -3.18681 | gap 1, opp_overlap 3093325, overlap 3093334 ACAGGGAAGTTGTCT G-ACCGGATGCAA CAAGTA TTGCATCCGGTAC TTCATCGACTTAAAG TERM 3897 3093334 - 3093359 + T 82 -13.4 -2.79023 | opp_overlap 3093325, overlap 3093332 AGGGAAGTTGTCTGA CCGGATGCAA CAAGTA TTGCATCCGG TACTTCATCGACTTA bglA 3094811 - 3093372 - | 6-phospho-beta-glucosidase A; cryptic TERM 3898 3094251 - 3094263 + g 70 -5.5 -4.38369 | opp_overlap 3094242 AAACAGCGGCGCACG CCAGT TAC GCTGG TTGTTTATTTCGTTG yqfB 3094850 - 3095161 + | hypothetical protein TERM 3899 3095859 - 3095871 + G 70 -4.1 -4.64844 | GGCGGCGTGGTTTAT TCGCT CGG AGTGA TTTTCTATGTCTGCA SBO_3093 3095325 - 3095984 + | putative oxidoreductase ygfZ 3097160 - 3096180 - | putative global regulator ygfY 3097403 - 3097669 + | hypothetical protein SBO_3096 3097650 - 3098057 + | hypothetical protein TERM 3900 3098090 - 3098061 - T 72 -8.5 -3.77188 | ACGCAAAGATAAATA TGACGGCAAAGCA TATG CGCTAAGCCGTCA GTGAGATCAGGCGTA fldB 3098618 - 3098097 - | flavodoxin FldB xerD 3098730 - 3099626 + | site-specific tyrosine recombinase XerD TERM 3901 3100158 - 3100148 - g 84 -4 -5.19879 | TGCGAAAGATAAAAA CAAA GCG TTTG ATGATGTGATGGCTG dsbC 3099651 - 3100361 + | thiol:disulfide interchange protein DsbC TERM 3902 3100966 - 3100978 + G 70 -4.7 -4.58395 | GTTTTATCTGATGCT GGCGC TGC GCACC TTTTTGCGCGATCAG recJ 3100367 - 3102100 + | ssDNA exonuclease RecJ TERM 3903 3102122 - 3102148 + F 82 -11.7 -3.30903 | gap 1, opp_overlap 3102122 CTTCTCTATAAAAAA GAGCGTGGATTG GGTA CAATCC-CGCTC TTATCACCGCATTTT TERM 3904 3102148 - 3102122 - f 100 -11.7 -5.24129 | gap 1, opp_overlap 3102122 CTTCTCTATAAAAAA GAGCGTGGATTG GGTA CAATCC-CGCTC TTATCACCGCATTTT prfB 3102408 - 3103289 + | peptide chain release factor RF-2 lysS 3103299 - 3104816 + | lysyl-tRNA synthetase TERM 3905 3104837 - 3104854 + T 100 -10.5 -5.33848 | opp_overlap 3104837 ACGTTATGCTAATAA CCCCGGC AAAT GTCGGGG TTTTTTAATTGTGCT SBO_3103 3105407 - 3104859 - | isopentenyl-diphosphate delta-isomerase ygfU 3107174 - 3105657 - | putative permease TERM 3906 3107259 - 3107243 - R 82 -10.9 -3.60661 | GAGGCAATCACATAA TCGTGGT TAA ACCACGA AAATGAGAAGAGAAC insB 3108011 - 3107508 - | IS1 ORF2 SBO_3106 3108104 - 3108286 + | putative IS1 encoded protein ygfJ 3109153 - 3108575 - | hypothetical protein TERM 3907 3109693 - 3109683 - g 72 -6.8 -4.2349 | opp_overlap 3109682 3109683 CTTGCATACCCAAAA GCAG TTG CTGC GTGATTGCTGTGATG TERM 3908 3109832 - 3109849 + G 71 -9.1 -3.54424 | gap 1 CTCGTTGCGCTGGTT CGCCACCC TCA GGG-GGCG TTTAAAAACGTACCG TERM 3909 3109883 - 3109896 + G 74 -3.1 -4.89852 | overlap 3109884 GGTTGTCGGCGAGTC TGGTT CATT AACCG TTTTTCTCAATGTGA SBO_3108 3109319 - 3110026 + | hypothetical protein TERM 3910 3111568 - 3111595 + G 72 -7.8 -3.96148 | gap 1, opp_overlap 3111578 3111579, overlap 3111567 GGTGATATCGATCCT CG-TGGTGAAACC GCT GATTTCACCAGCG TTTCTGATAAAGCCC SBO_3109 3110074 - 3111699 + | putative synthase TERM 3911 3111734 - 3111707 - T 93 -10.5 -4.54727 | overlap 3111708 TGGCTTAAATGAAAA TGGCCGGATGG TATTAC CCACCCGGCCT TAAAATTACTGACAA TERM 3912 3111733 - 3111708 - T 90 -14 -3.32354 | overlap 3111707 GGCTTAAATGAAAAT GGCCGGATGG TATTAC CCACCCGGCC TTAAAATTACTGACA yqeA 3112672 - 3111740 - | carbamate kinase TERM 3913 3112336 - 3112360 + g 70 -5.8 -4.24342 | gap 1 TAGCGTCGACTTCGA CCTG-AGTAAC CAGC GTTGCTACAGG TTTATTAATGCCCCG SBO_3111 3114105 - 3112720 - | dihydropyrimidinase TERM 3914 3114140 - 3114121 - R 100 -15 -4.71482 | AGCAAACTCCAAAAA CCCTCCGG CGAA CCGGAGGG GAATAAGTGAAGAGT ygeY 3115369 - 3114158 - | peptidase ygeX 3116623 - 3115427 - | diaminopropionate ammonia-lyase TERM 3915 3116335 - 3116347 + g 70 -4.9 -4.57569 | opp_overlap 3116321 ATGACAGCGTTTCGA TATCA AGA TGATA TTTTTCACACAATAA TERM 3916 3116674 - 3116653 - H 86 -13.7 -3.24232 | overlap 3116651 GCCTCTGGAAATAGA GGGCCGACC AGCT GATCGGCCC GAGGGGTTATTTCAC SBO_3114 3116859 - 3117134 + | IS629 ORF1 TERM 3917 3117454 - 3117442 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_3115 3117134 - 3118021 + | IS629 ORF2 TERM 3918 3118126 - 3118136 + T 74 -6.8 -4.30576 | GTTGAGATGTTTTCA GCAC GCA GTGC TTTTAATGCTGCGGC TERM 3919 3118448 - 3118458 + T 71 -6.8 -4.07877 | GATCACAAATTGATG CCAG CTT CTGG TTGTTTGTAAAATAC TERM 3920 3120533 - 3120564 + T 93 -10.8 -4.5528 | opp_overlap 3120538, overlap 3120535 3120538 AAACACATAACCTCA GTGAATCCGGCCTG AATT CAGGCCGGATATCC TTTTACTTCGTTTTC TERM 3921 3120535 - 3120563 + T 90 -14 -3.31541 | gap 1, opp_overlap 3120538, overlap 3120533 3120538 ACACATAACCTCAGT GA-ATCCGGCCTG AATT CAGGCCGGATATC CTTTTACTTCGTTTT TERM 3922 3120538 - 3120559 + T 100 -15.9 -3.14708 | opp_overlap 3120538, overlap 3120535 3120533 CATAACCTCAGTGAA TCCGGCCTG AATT CAGGCCGGA TATCCTTTTACTTCG TERM 3923 3120559 - 3120538 - T 93 -15.9 -3.08471 | opp_overlap 3120538 3120535 3120533 CATAACCTCAGTGAA TCCGGCCTG AATT CAGGCCGGA TATCCTTTTACTTCG SBO_3117 3121046 - 3120567 - | xanthine dehydrogenase subunit XdhC ygeT 3121921 - 3121043 - | xanthine dehydrogenase subunit XdhB TERM 3924 3121846 - 3121868 + g 70 -9.8 -3.16564 | CGGCGAGCAGTTTGG CCTGCGGGTT GTT AGCCAGCAGG TTGATGGCATCGGCA SBO_3119 3124190 - 3121932 - | xanthine dehydrogenase subunit XdhA TERM 3925 3122537 - 3122578 + g 80 -5.2 -4.91977 | gap 1, overlap 3122530 TTATCAGGGTCAGAT TCATCGCTGACTGATGTAG CATGA CTGCGGC-GTGAGCGATGA TTTTCTCTTTTAATA TERM 3926 3122628 - 3122595 - G 77 -10.3 -3.61398 | gap 1, overlap 3122597 3122598 TTTCTCTTTTAATAA TAGTGCCGCA-CTGCG CAG CGCAGGCGCGGCAACA TAGCTCTGGCGTGAG TERM 3927 3122626 - 3122597 - G 76 -10.7 -3.38812 | gap 1, overlap 3122595 3122598 TCTCTTTTAATAATA GTGCCGCA-CTGCG CAG CGCAGGCGCGGCAA CATAGCTCTGGCGTG TERM 3928 3122625 - 3122598 - G 84 -14.2 -2.63073 | gap 1, overlap 3122597 3122595 CTCTTTTAATAATAG TGCCGCA-CTGCG CAG CGCAGGCGCGGCA ACATAGCTCTGGCGT TERM 3929 3123931 - 3123951 + g 78 -8.3 -4.25658 | overlap 3123927 TGGCGAGTTAGCAGT GCGCGAT CGGCGGT ATCGCGC TTGTTTTCGTCAAGT TERM 3930 3124043 - 3124025 - G 72 -4.5 -4.65895 | overlap 3124027 CTTCCCAGGTAAAAA TCGCCAG TACGC CCGGCAA ACTTCTGGCTTGTTC SBO_3120 3124875 - 3125780 + | insertion element IS2 transposase InsD TERM 3931 3126628 - 3126614 - g 79 -4.2 -5.02476 | opp_overlap 3126623 3126626 AGACTGGGCAAAAAA TCGCCA CTA TGGGGA GCACGGATGCGGCAT SBO_3121 3125956 - 3126735 + | putative lipoprotein TERM 3932 3127618 - 3127604 - T 82 -11.4 -3.50447 | opp_overlap 3127601 3127604 TGAATGGTTATAGAA GGGGCT GGA AGCCCC TAATTATTACTTCTT TERM 3933 3127604 - 3127618 + T 75 -11.4 -3.0062 | opp_overlap 3127604, overlap 3127601 TGAATGGTTATAGAA GGGGCT GGA AGCCCC TAATTATTACTTCTT SBO_3123 3128179 - 3128012 - | putative IS1 encoded protein insB 3128272 - 3128775 + | IS1 ORF2 SBO_3125 3128857 - 3129501 + | putative ribose ABC transporter TERM 3934 3130404 - 3130422 + G 93 -8.8 -5.06451 | CAGTTTCGCTGTGCG TCCGGGGG AGG TCCTCGGA TTTTTTGGCCTGGTG SBO_3126 3129532 - 3131061 + | ribose ABC transporter ATP-binding protein TERM 3935 3131362 - 3131373 + G 71 -2.2 -4.90302 | GCGCTTGGGGCTTCA TGGG GAAT TCCA TTTATTTTATTGGTC SBO_3127 3131062 - 3131811 + | ribose ABC transporter permease SBO_3128 3131824 - 3132051 + | hypothetical protein SBO_3129 3132073 - 3133035 + | carbohydrate kinase SBO_3130 3133032 - 3133664 + | hypothetical protein TERM 3936 3133963 - 3133974 + G 72 -7.2 -4.15044 | opp_overlap 3133955 3133957 AAAGAACGAGCGCAG GGGC GTCT GCCC TTTATTGAGCCAGGG SBO_3131 3133651 - 3134079 + | hypothetical protein TERM 3937 3134096 - 3134122 + T 70 -9.4 -3.43651 | opp_overlap 3134084 3134096 TAACGGCAATAAAAA CGCCGGGC AGCGTTAACAG GCCCGGCG TTGATTACGTTCTTT TERM 3938 3134122 - 3134096 - T 100 -9.4 -5.10208 | opp_overlap 3134096, overlap 3134084 TAACGGCAATAAAAA CGCCGGGC AGCGTTAACAG GCCCGGCG TTGATTACGTTCTTT accC 3135520 - 3134171 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 3939 3134569 - 3134587 + g 74 -8 -4.00756 | TCGACAGCGGTTGAC CGGCAGCG ATA CGCAGCTG TTCTTTGATCAGGTC accB 3136001 - 3135531 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit SBO_3134 3136820 - 3136921 + | hypothetical protein yhdH 3137953 - 3136979 - | putative dehydrogenase TERM 3940 3137244 - 3137192 - G 70 -5.7 -4.33819 | gap 3, overlap 3137237 ATTACGCAGAATAAA TGGCATGACCGTGGT-TGGCAGAGTA AAAC CACCC-GCCAGACCACAGGC-CGCCA CGCAGCCGCCGTAAT TERM 3941 3139327 - 3139344 + G 72 -8.3 -3.85698 | TCGAGCAAATGCTCA GTCGCGG CGGC CCGCGCC TTTATCAAAAACCGG yhdA 3138105 - 3140045 + | regulatory protein CsrD TERM 3942 3140581 - 3140598 + G 72 -8.3 -3.73647 | opp_overlap 3140581 3140583 ATTCGCCCAATGAAA GACGGCG TTAT CGCCGAC TTCTTCGTGACTGAA TERM 3943 3140598 - 3140581 - g 74 -8.3 -3.90291 | opp_overlap 3140581, overlap 3140583 ATTCGCCCAATGAAA GACGGCG TTAT CGCCGAC TTCTTCGTGACTGAA TERM 3944 3140596 - 3140583 - g 71 -9.5 -3.54146 | opp_overlap 3140581, overlap 3140581 TCGCCCAATGAAAGA CGGCG TTAT CGCCG ACTTCTTCGTGACTG mreB 3140290 - 3141393 + | penicillin binding protein 3 TERM 3945 3141400 - 3141433 + F 72 -10.3 -2.78596 | opp_overlap 3141394, overlap 3141401 3141403 GAAGAGTAATCGGAT GCAGGCAGGGGAAAT GTCT GTTTACCCTGCCTGG TCTGATACGAGAATA TERM 3946 3141403 - 3141430 + F 71 -10.6 -2.66316 | opp_overlap 3141394, overlap 3141401 3141400 GAGTAATCGGATGCA GGCAGGGGAAAT GTCT GTTTACCCTGCC TGGTCTGATACGAGA TERM 3947 3141782 - 3141753 - g 76 -7.7 -4.27117 | opp_overlap 3141755, overlap 3141761 CTTGGACAATACAAA CAGGAGAACGCGC GTCT GCGCGAGCTGCTG GGTTCCCCGCTGCGT TERM 3948 3141774 - 3141761 - g 73 -9.5 -3.59627 | opp_overlap 3141755, overlap 3141753 ATACAAACAGGAGAA CGCGC GTCT GCGCG AGCTGCTGGGTTCCC mreC 3141459 - 3142544 + | cell wall structural complex MreBCD transmembrane component MreC mreD 3142544 - 3143032 + | rod shape-determining protein MreD yhdE 3143041 - 3143634 + | Maf-like protein TERM 3949 3144037 - 3144054 + G 75 -11.3 -3.01924 | overlap 3144033 GCCAGGGGCTTCTCA CGTTGGG GTTT CCCAACG TATTGAAAGCGAATC TERM 3950 3144465 - 3144450 - g 82 -9 -4.20136 | ATGTCGAAAACGAAA TCCAGC GAGC GCTGGA ACGCAAAGTAGAACT cafA 3143624 - 3145093 + | ribonuclease G TERM 3951 3148343 - 3148332 - g 74 -5.8 -4.54727 | opp_overlap 3148332 TCGCTGAAAGGAAAA CTGC GCGG GCAG AAAATTGATGCCGCC yhdRP 3145161 - 3148961 + | hypothetical protein TERM 3952 3149633 - 3149669 + G 81 -10.8 -3.65827 | gap 1 GTTGCGGCCACCGAC GGCACGCTAGCGG-CGG ATGT CCGTCCGCTGGTGCGTC TTTCCGTGAGCGTTC tldD 3149117 - 3150562 + | protease TldD qseA 3151619 - 3150690 - | putative DNA-binding transcriptional regulator SBO_3145 3152577 - 3151672 - | insertion element IS2 transposase InsD SBO_3146 3152900 - 3152535 - | insertion sequence 2 OrfA protein yhcR 3153138 - 3153341 + | hypothetical protein TERM 3953 3153576 - 3153562 - f 76 -4.2 -5.0133 | CAGCTGGTGAAAAAA GGACAG ATA CTGTTC ACCATCGACCAGCCG yhcP 3154287 - 3156254 + | p-hydroxybenzoic acid efflux subunit AaeB TERM 3954 3156262 - 3156280 + F 73 -2.3 -5.17353 | opp_overlap 3156262 ATAGTTAGGTCAAAA CCAACGC CAAAA GTGTCGG TTTTTTCATGGCTAT yhcO 3156346 - 3156618 + | hypothetical protein TERM 3955 3156646 - 3156630 - T 100 -15.1 -5.78622 | opp_overlap 3156628 TTAGCGCAAAAAAAA GCCCCCG AAC CGGGGGC AATATCGTCGGACAA yhcN 3156988 - 3156674 - | hypothetical protein TERM 3956 3157122 - 3157091 - R 89 -4 -5.64873 | TTTAATAACAAAAAA GAATTAAAAACA CGGTCATT TATTTTTAATTC TAGTATTTTCAATTA TERM 3957 3157151 - 3157161 + r 82 -3.2 -5.45726 | TAGATAATAAATTTT GCAT AAT GTGC TTTTTTTACCGTATG TERM 3958 3157300 - 3157270 - R 73 -9.6 -3.30039 | overlap 3157268 GAGGGATAAGCAACA TTTTCCCCGCCGCC AGA AGCGACGGGGCAGA GATTAAAGCTCCTGG argR 3157773 - 3157303 - | arginine repressor mdh 3158208 - 3159146 + | malate dehydrogenase TERM 3959 3159162 - 3159193 + T 95 -12.5 -4.09685 | opp_overlap 3159159 3159169, overlap 3159169 TTGATTAGCGAATAA TAAAAAACCGGAG CACAGA CTCCGGTTTTTTG TTTTGAGCACTCGAC TERM 3960 3159169 - 3159186 + T 100 -8.4 -5.79595 | opp_overlap 3159169 3159159, overlap 3159162 GCGAATAATAAAAAA CCGGAG CACAGA CTCCGG TTTTTTGTTTTGAGC TERM 3961 3159186 - 3159169 - T 100 -9.1 -5.64873 | opp_overlap 3159162 3159169, overlap 3159159 GCGAATAATAAAAAA CCGGAGC ACAG ACTCCGG TTTTTTGTTTTGAGC degS 3160276 - 3159209 - | serine endoprotease TERM 3962 3160356 - 3160327 - R 73 -10.7 -3.11192 | opp_overlap 3160327, overlap 3160339 CATACCACGAGTTAA CCGGACATCACAC GTAA GCCTGATGCCCGG TTTACGACATTAACG degQ 3161733 - 3160366 - | serine endoprotease TERM 3963 3161876 - 3161858 - R 79 -12.4 -2.83517 | AGGGAGAGAAGAGGA GGGCGCAA TGG CTGCGCCC GAAAAATAAATTAGT yhcB 3162291 - 3161887 - | cytochrome d ubiquinol oxidase subunit III TERM 3964 3162024 - 3162047 + g 88 -11 -4.13282 | opp_overlap 3162024 TTGCTTCAGCAGACA GTTCCGGCAG CAGG CTGCTGGAGC TTTTCGCCATGTGCT yhcM 3162479 - 3163606 + | hypothetical protein TERM 3965 3163647 - 3163629 - f 100 -8.8 -5.06735 | opp_overlap 3163627 CACAAATCACAAAAA GGGGTCGA TCT TTGACCCC GACTTCTCTATAATC TERM 3966 3163686 - 3163700 + F 72 -2.9 -5.00895 | opp_overlap 3163682 3163686, overlap 3163679 CCACGTTACAAGAAA GTTTT TTCCC AAAAC TTTTTGTGTGCTGGC TERM 3967 3163962 - 3163947 - g 70 -6.8 -4.05446 | CGCGGTAAGCACAAA GCGGAA TACA CTCCGC ACGTAGATACCGGTG rplM 3163824 - 3164252 + | 50S ribosomal protein L13 rpsI 3164268 - 3164660 + | 30S ribosomal protein S9 TERM 3968 3164712 - 3164699 - f 100 -9.5 -5.03145 | opp_overlap 3164699 CAATTTTCGAAAAAA CCCGC TTCG GCGGG TTTTTTTATAGCTAA TERM 3969 3164699 - 3164712 + F 100 -9.5 -5.64274 | opp_overlap 3164699 CAATTTTCGAAAAAA CCCGC TTCG GCGGG TTTTTTTATAGCTAA sspA 3165055 - 3165693 + | stringent starvation protein A sspB 3165699 - 3166196 + | ClpXP protease specificity-enhancing factor TERM 3970 3166200 - 3166226 + F 79 -9.5 -3.75571 | opp_overlap 3166205, overlap 3166205 GTTGTGAAGTAATAC AAAAACAGGCC CTGGT GGCCTGTTTTG TCTTTTAATGGCTTA TERM 3971 3166221 - 3166205 - f 100 -9.4 -5.1485 | opp_overlap 3166200 3166205 GAAGTAATACAAAAA CAGGCC CTGGT GGCCTG TTTTGTCTTTTAATG TERM 3972 3166205 - 3166221 + F 100 -9.4 -4.91977 | opp_overlap 3166205, overlap 3166200 GAAGTAATACAAAAA CAGGCC CTGGT GGCCTG TTTTGTCTTTTAATG TERM 3973 3166334 - 3166324 - f 76 -8.2 -4.15565 | TTCACCACCGCAAAA GGCG AAA CGCC TGCAATTCCTGACGT TERM 3974 3166929 - 3166940 + F 75 -3 -5.24129 | TGCTTGTTCGTGATT GATA TTTT TATC TTTTTTGTCAAAAGC yhcK 3167985 - 3168776 + | transcriptional regulator NanR nanA 3168898 - 3169791 + | N-acetylneuraminate lyase TERM 3975 3169789 - 3169838 + F 74 -10.9 -2.89683 | gap 1, opp_overlap 3169782 3169780 ATGCAAGAGCGCGGG TGAGTT-GTTTCCCCTCGCTCG CCCCTAC CGGGTGAGGGGAAATAAACGCA TCTGTACCCTACAAT TERM 3976 3169887 - 3169866 - f 95 -12.3 -3.8377 | gap 1 AATTTTTATACCAAA GCGTGTGGGC ATC GCCCAC-CGC GGGAGACTCACAATG nanT 3169900 - 3171390 + | putative sialic acid transporter TERM 3977 3171398 - 3171417 + F 72 -10.7 -2.78679 | overlap 3171397 AAAGTTAATCCTGTT GCCCGGT CTCTGT ACCGGGC CTTTCGCTAAGGGAA yhcJ 3171438 - 3172127 + | N-acetylmannosamine-6-phosphate 2-epimerase yhcI 3172124 - 3172999 + | N-acetylmannosamine kinase yhcH 3172996 - 3173460 + | hypothetical protein TERM 3978 3173931 - 3173957 + T 88 -12.4 -3.57263 | overlap 3173933 ATCAAACAGCCTCTC AATTTGGCAGAC AGC GTCTGCCAAATC TTTGCCGATGGGAAT TERM 3979 3173933 - 3173955 + T 100 -15 -3.36515 | overlap 3173931 CAAACAGCCTCTCAA TTTGGCAGAC AGC GTCTGCCAAA TCTTTGCCGATGGGA TERM 3980 3173960 - 3174006 + T 100 -16 -3.33696 | overlap 3173962 3173983 CGTCTGCCAAATCTT TGCCGATGGGAATTCTGCAGAT GGT GTCTGCGGAATTCCCAATGGTG TTAATTCGCCAGACA TERM 3981 3173962 - 3174004 + T 100 -18.6 -3.23853 | overlap 3173960 3173983 TCTGCCAAATCTTTG CCGATGGGAATTCTGCAGAT GGT GTCTGCGGAATTCCCAATGG TGTTAATTCGCCAGA TERM 3982 3174011 - 3174033 + T 100 -16.4 -3.6106 | overlap 3173983 TCCCAATGGTGTTAA TTCGCCAGAC ACT GTCTGGCGAA TTTCAACATGTTGAA gltD 3175939 - 3174521 - | glutamate synthase subunit beta TERM 3983 3175169 - 3175183 + g 75 -5.6 -4.64861 | overlap 3175171 CGGCAGCGCTGCGTA CACGCC ATC GGCGTC TTTGTTTTCCAGACC TERM 3984 3175171 - 3175181 + g 74 -8.2 -3.93868 | overlap 3175169 GCAGCGCTGCGTACA CGCC ATC GGCG TCTTTGTTTTCCAGA TERM 3985 3175479 - 3175495 + g 74 -2.1 -5.07107 | opp_overlap 3175452, overlap 3175481 AGACCTGCCGGGCCT GCGCCGA TAA TCGCCAC TTTTTTACCGGTTTG gltB 3180505 - 3175952 - | glutamate synthase subunit alpha TERM 3986 3176774 - 3176801 + g 70 -6.2 -4.1899 | opp_overlap 3176765, overlap 3176777 CAGCAACTGCGCGTT CAGCAGGCCGTT ATCA AACGGCGGGTTG TTTTCGGTGCAGTAG TERM 3987 3179235 - 3179248 + g 72 -5.2 -4.58283 | ACCATCAGTTCGCCT GGCC CGACGC GGCC TTTTTCGACCACTTC TERM 3988 3179407 - 3179382 - G 72 -11.1 -3.08508 | overlap 3179379 3179395 CAGGCGGCAAAACGA CCGTCGGACAT CACG ATGCCCGCCGG GCCATCCCACGGCTC TERM 3989 3179840 - 3179822 - G 70 -4.5 -4.56961 | gap 1, overlap 3179824 AAGATCCAGATAAAA GCGCGGCA GATC CGCCG-GC ATACACAGACCTTTA TERM 3990 3180788 - 3180772 - H 71 -7.3 -4.03978 | opp_overlap 3180774 AAGTCGTTAGAGAAA CAGTCAA TTC CTGACTG TCATAAAGGCGTGTT TERM 3991 3181643 - 3181670 + G 73 -11.3 -2.60615 | overlap 3181642 3181640 GTTCCCACTTAATTG TCGGCCTGCCT GGTGAA GGGCAGGCTGA ATGTTTGCAAACGCT yhcC 3181087 - 3182016 + | hypothetical protein TERM 3992 3182715 - 3182691 - g 74 -2.8 -4.92239 | GGAAAAAGCGAAAAA CAACTGGTTC ACCTG AAACCTGCTG ATGTTTACTCACCGG TERM 3993 3184051 - 3184035 - g 70 -6.5 -4.2704 | GCGATGATCAAGAAA TTCTGGG ATA CCCAGGA TGATGAGGAGAGTAC arcB 3182112 - 3184448 + | aerobic respiration control sensor protein ArcB TERM 3994 3184468 - 3184446 - f 82 -5.4 -5.19261 | overlap 3184447 3184449 AAAGCCACTAAAAAA TGACCCCGGC TAG ACCGGGGTGC GCGAATACTGCGCCA TERM 3995 3184467 - 3184447 - f 76 -8.9 -3.6993 | overlap 3184446 3184449 AAGCCACTAAAAAAT GACCCCGGC TAG ACCGGGGTG CGCGAATACTGCGCC TERM 3996 3184465 - 3184449 - f 79 -11.5 -3.41701 | overlap 3184447 3184446 GCCACTAAAAAATGA CCCCGGC TAG ACCGGGG TGCGCGAATACTGCG yhbL 3184669 - 3185331 + | isoprenoid biosynthesis protein mtgA 3185328 - 3186056 + | monofunctional biosynthetic peptidoglycan transglycosylase yrbL 3186685 - 3186053 - | hypothetical protein TERM 3997 3186911 - 3186890 - R 72 -10.3 -2.75963 | overlap 3186889 AGTTGTATGTCAAAG TGATGAAGA TTAA TCTTCATCA AAACCAGAGTTAAAG ptsO 3187171 - 3186899 - | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 3998 3187114 - 3187139 + g 88 -11.1 -4.13654 | overlap 3187117 CAAACAGCTTCATTG CAGGCCGGGCA TGCA TGCCCAGCTTG TTTGTGATTTCAACA TERM 3999 3187117 - 3187136 + g 82 -9.2 -4.1851 | overlap 3187114 ACAGCTTCATTGCAG GCCGGGCA TGCA TGCCCAGC TTGTTTGTGATTTCA yhbJ 3188022 - 3187168 - | hypothetical protein TERM 4000 3188014 - 3188028 + g 74 -8.6 -3.96148 | TCCGCTGACGATCAT CAGTAC CAT GTACTG TTTCTCCTCACAACG ptsN 3188559 - 3188068 - | sugar-specific enzyme IIA component of PTS TERM 4001 3188314 - 3188304 - G 81 -8.2 -4.42238 | overlap 3188280 3188276 CGAGCTGAACGAAAA CGCC AAC GGCG CGCAGAGTATCTTCT TERM 4002 3188424 - 3188412 - G 81 -6.9 -4.61231 | overlap 3188415 GGATAGCTTCAAAAA CCACC TGA GGCGG CAGGCTAAGTTGTTT TERM 4003 3188649 - 3188623 - R 95 -13 -3.93236 | overlap 3188624 CATTAACCGTACAAA TGGCCCGTTGTG CCG CACAACAGGCCG CCATGCACATGCTAA TERM 4004 3188648 - 3188624 - R 100 -16.5 -2.95459 | overlap 3188623 ATTAACCGTACAAAT GGCCCGTTGTG CCG CACAACAGGCC GCCATGCACATGCTA rpoN 3190420 - 3188987 - | RNA polymerase factor sigma-54 TERM 4005 3189785 - 3189795 + g 75 -6.8 -4.42788 | TCTGGCCTCTTCCAG CCAC GGC GTGG TTTTATCGAATTGGG TERM 4006 3190366 - 3190340 - G 80 -11.6 -3.30124 | opp_overlap 3190348 TTCCAGCGTCGACAA CTGCAACAGACG AAT CGCCTGTTGAAG CTGTGGCGTCATCGC yhbG 3191193 - 3190468 - | putative ABC transporter ATP-binding protein YhbG TERM 4007 3191218 - 3191232 + r 71 -3.4 -4.80417 | overlap 3191219 ATTACCCTTCTTCTG TGCCGG GGT CTGGCC TTTGTTGTTTTTGTC yhbN 3191757 - 3191200 - | hypothetical protein yrbK 3192301 - 3191726 - | hypothetical protein TERM 4008 3192209 - 3192220 + gr 70 -3.6 -4.59511 | GTTGACGACCACCTG GGCG GTAT CGTC TTTTTCGGCCATATT yrbI 3192864 - 3192298 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase yrbH 3193871 - 3192885 - | D-arabinose 5-phosphate isomerase TERM 4009 3192955 - 3192937 - G 84 -11 -3.79138 | AACACACCGAGTAAA TGGTCGCC ATC GGCAACCA TCACGGAGGTGATAT yrbG 3194862 - 3193885 - | putative calcium/sodium:proton antiporter TERM 4010 3194024 - 3194013 - G 70 -4.4 -4.47888 | GCAACGCAAAAATAA TGCT CACC AGCA ACATCACGCTGTAGT TERM 4011 3194139 - 3194152 + g 72 -6.7 -4.24002 | CGCCAATGATATTTC CGACA GCAA TGTCG TTTTCACCTTTGCGA TERM 4012 3194361 - 3194338 - G 90 -7.4 -4.87665 | gap 1 GCCGAGCCATAAAAA CGCGACGGGCA ATC CGCC-GTCACG CGGCAGCTCTGCAAG yrbF 3195072 - 3195881 + | putative ABC transporter ATP-binding protein YrbF yrbE 3195889 - 3196671 + | hypothetical protein yrbD 3196676 - 3197227 + | hypothetical protein yrbC 3197246 - 3197881 + | hypothetical protein yrbB 3197785 - 3198174 + | hypothetical protein TERM 4013 3198233 - 3198257 + F 85 -7.2 -5.05712 | gap 1, overlap 3198225 CTGCCTGCAAGTCGA GCCTTGTCTGA TTTA TCAG-CGAGGC TTTTTGCTTATTTAT TERM 4014 3198491 - 3198468 - g 76 -3.8 -5.00884 | AGTCGGGTTAAAAAA CAGCAGAC GGTCTATG GCCCGCTG ATGGAATATATTGCG yrbA 3198318 - 3198587 + | hypothetical protein TERM 4015 3199144 - 3199122 - g 86 -10.6 -3.92075 | opp_overlap 3199120 ATCGTGATGGATAAA GTCAGCGTTG GCG CAACGGTGAC CATCATGTGTGCTGC murA 3198642 - 3199901 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase nlp 3200227 - 3199949 - | DNA-binding transcriptional regulator Nlp TERM 4016 3200442 - 3200424 - R 90 -16 -2.7386 | AATTTACTGGAATCA TCCCGCGC ACT GCGCGGGA TGAAGGGAGGGGATT ispB 3201427 - 3200456 - | octaprenyl diphosphate synthase TERM 4017 3200740 - 3200750 + g 81 -6.8 -4.67755 | TACCTTCGTTCAGAT CGTC GCC GACG TTTTTACCTAACTGT TERM 4018 3200888 - 3200916 + g 70 -5.1 -4.3586 | opp_overlap 3200888 CAGAATCCCGGAACA CTGCGCGGCAG CCTCAAA CAGACGCGCGG TTTTGCTATAGATAA rplU 3201685 - 3201996 + | 50S ribosomal protein L21 rpmA 3202017 - 3202274 + | 50S ribosomal protein L27 TERM 4019 3202324 - 3202303 - f 100 -15.9 -3.794 | opp_overlap 3202303 CGGTAACGGATGAAA GCCCCGCAA CACG TTGCGGGGC TTTTTACATTCGATA TERM 4020 3202303 - 3202324 + F 100 -15.9 -4.75174 | opp_overlap 3202303 CGGTAACGGATGAAA GCCCCGCAA CACG TTGCGGGGC TTTTTACATTCGATA TERM 4021 3203134 - 3203171 + G 76 -9.1 -3.74198 | gap 1, overlap 3203128 TGGCTCGCTGGCAGG CAGCGCAGGTGAGCGCGA TCA TCACGCTCACCC-CACTG TTTACGCTGTTTTTT yhbE 3202401 - 3203366 + | hypothetical protein TERM 4022 3203820 - 3203806 - g 70 -5.6 -4.40804 | CACCACGGCAGAAAA CCAACG GTA CGCCGG GTGATAAGCGTGAGC TERM 4023 3204204 - 3204188 - g 72 -7.9 -3.91506 | opp_overlap 3204200 3204201, overlap 3204186 3204190 CGAGCTGGAAAAATA CAGCCAG GAT CTGGCGG CGAAACCGCGTTGGT TERM 4024 3204202 - 3204190 - g 71 -9.1 -3.54256 | opp_overlap 3204200 3204201, overlap 3204188 3204186 AGCTGGAAAAATACA GCCAG GAT CTGGC GGCGAAACCGCGTTG obgE 3203382 - 3204554 + | GTPase ObgE TERM 4025 3204582 - 3204564 - T 95 -13.1 -4.3534 | opp_overlap 3204564 CGTTAATCAGCAAAA CCCCGGC CATGT GCCGGGG TTTCTTTTTGACTAA TERM 4026 3204564 - 3204582 + T 100 -13.1 -4.89063 | opp_overlap 3204564 CGTTAATCAGCAAAA CCCCGGC CATGT GCCGGGG TTTCTTTTTGACTAA dacB 3206027 - 3204594 - | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4027 3205219 - 3205235 + g 70 -5.8 -4.24326 | AGCAGTGTTCCGCTC CAGGTG ATACC CGCCTG TTTTAACTCATCTTT TERM 4028 3206142 - 3206173 + H 89 -5.2 -5.68023 | gap 1, overlap 3206145 TCAAAATGTGAATTG TAGCTGACCTGGG ACTTGTA CCCGGGTCGG-TA TTTTTTTGCTTCTGG TERM 4029 3206145 - 3206171 + H 86 -9.4 -4.46828 | overlap 3206142 AAATGTGAATTGTAG CTGACCTGGG ACTTGTA CCCGGGTCGG TATTTTTTTGCTTCT TERM 4030 3206713 - 3206702 - g 72 -7.2 -4.25104 | TTGTGGTCATCAAAA CGCC GGGC GGCG AAGTAGAATTTGAAG greA 3206275 - 3206751 + | transcription elongation factor GreA TERM 4031 3206822 - 3206795 - T 86 -13.6 -3.25946 | gap 1, opp_overlap 3206801, overlap 3206801 GTATTGTAAAGAAAG GA-AAAAGGCCGC TAT GCGGCCTTTTATC AACGAACAGAGCGTG TERM 4032 3206815 - 3206801 - T 100 -12.8 -5.13137 | opp_overlap 3206801, overlap 3206795 TAAAGAAAGGAAAAA GGCCGC TAT GCGGCC TTTTATCAACGAACA TERM 4033 3206801 - 3206815 + T 95 -12.8 -4.36914 | opp_overlap 3206801 3206795 TAAAGAAAGGAAAAA GGCCGC TAT GCGGCC TTTTATCAACGAACA yhbY 3207201 - 3206908 - | RNA-binding protein YhbY TERM 4034 3207160 - 3207177 + g 90 -4.9 -5.34309 | gap 1, overlap 3207159 CTTGAGCGGATGTGC CAG-ACCT TTC AGGTGCTG TTTTTGTTTAGTACT TERM 4035 3207426 - 3207413 - g 76 -3.8 -4.99638 | opp_overlap 3207424 ACAGGCACAGAAAAA GGGA TTACGT TCCC GTGCCTGGTTTAAAC rrmJ 3207327 - 3207956 + | 23S rRNA methyltransferase J hflB 3208056 - 3209990 + | ATP-dependent metalloprotease TERM 4036 3210045 - 3210026 - f 87 -10.6 -4.18494 | opp_overlap 3210026 TATTTGTACCGAAAA CCCCGGGG CGTG CTCCGGGG TTTTTTCTTATCAAT TERM 4037 3210026 - 3210045 + F 100 -12.8 -5.56673 | opp_overlap 3210026 TATTTGTACCGAAAA CCCCGGGG CGTG CTCCGGGG TTTTTTCTTATCAAT TERM 4038 3210474 - 3210485 + G 70 -7.2 -4.0942 | opp_overlap 3210474 AGGCGGCGGCAGAAA CCGG TTTA CCGG TTTGTCTGATGCATA folP 3210080 - 3210928 + | dihydropteroate synthase TERM 4039 3211296 - 3211281 - g 76 -9 -3.74872 | ATCGACGGCACCAAA CTACCG GATG CGGTAG AAGAGGCCATCGAAG glmM 3210921 - 3212258 + | phosphoglucosamine mutase TERM 4040 3212297 - 3212282 - f 74 -6 -4.58663 | opp_overlap 3212284 3212285, overlap 3212284 ATGACTGGCTAAAAA GGCGGC GATT GTCGCC TTTTTTCTCAGCGAA TERM 4041 3212285 - 3212297 + F 100 -9.1 -5.24129 | opp_overlap 3212282 3212284, overlap 3212284 ACTGGCTAAAAAGGC GGCGA TTG TCGCC TTTTTTCTCAGCGAA TERM 4042 3212306 - 3212328 + F 81 -3.5 -5.41746 | gap 1 TGTCGCCTTTTTTCT CAGCGAACAC ATCG GT-TTTGCTG TTTTTTTCCGCAGTT TERM 4043 3212794 - 3212772 - g 78 -7.7 -4.32607 | CGAAAACCGAACAAA CTCAGCCAG CTGCT CCGGCTAAG CCGACCAGCGATATC secG 3212486 - 3212818 + | preprotein translocase subunit SecG TERM 4044 3212926 - 3212957 + F 91 -11 -4.32436 | opp_overlap 3212932 3212934, overlap 3212927 3212934 TCGGTACCAAACTCC AGAAAAGAGACGCT GAAA AGCGTCTTTTTTCG TTTTGGTCCTGGTCT TERM 4045 3212927 - 3212956 + F 90 -14.5 -3.18738 | opp_overlap 3212932 3212934, overlap 3212926 3212934 CGGTACCAAACTCCA GAAAAGAGACGCT GAAA AGCGTCTTTTTTC GTTTTGGTCCTGGTC TERM 4046 3212951 - 3212932 - f 75 -6.4 -4.44974 | opp_overlap 3212927 3212926 3212934, overlap 3212934 CCAAACTCCAGAAAA GAGACGCT GAAA AGCGTCTT TTTTCGTTTTGGTCC TERM 4047 3212949 - 3212934 - f 76 -9 -3.82551 | opp_overlap 3212927 3212926 3212934, overlap 3212932 AAACTCCAGAAAAGA GACGCT GAAA AGCGTC TTTTTTCGTTTTGGT TERM 4048 3212934 - 3212949 + F 100 -9 -5.48054 | opp_overlap 3212934 3212932, overlap 3212927 3212926 AAACTCCAGAAAAGA GACGCT GAAA AGCGTC TTTTTTCGTTTTGGT TERM 4049 3214192 - 3214174 - g 72 -7.4 -3.86031 | opp_overlap 3214175, overlap 3214175 3214177 TTAATCAAGCAATAA GCAGCGCA CCT TACACTGC GCTGTCGGTTCCCCT yhbX 3213360 - 3215003 + | putative alkaline phosphatase I argG 3216354 - 3215011 - | argininosuccinate synthase TERM 4050 3216920 - 3216903 - H 71 -6.9 -4.0641 | opp_overlap 3216904, overlap 3216904 GTTCAGTTATATAAA GCCCCGA TTTA TCGGGGT TTTTTGTTATCTGAC TERM 4051 3216919 - 3216904 - H 73 -10.4 -3.03525 | opp_overlap 3216904, overlap 3216903 TTCAGTTATATAAAG CCCCGA TTTA TCGGGG TTTTTTGTTATCTGA TERM 4052 3216904 - 3216919 + H 100 -10.4 -5.60689 | opp_overlap 3216904 3216903 TTCAGTTATATAAAG CCCCGA TTTA TCGGGG TTTTTTGTTATCTGA TERM 4053 3216948 - 3216960 + H 93 -6.9 -5.80248 | opp_overlap 3216947 GACTACAGAATAACT GGGCT TTA GGCCC TTTTTTTATGTCTTG yhbC 3216985 - 3217437 + | hypothetical protein TERM 4054 3218718 - 3218700 - g 82 -7.4 -4.57569 | CGAGCGTGCTAAAAA TGCACTGG CCA CCATTGCA CAGGCCCAGGAAGAA TERM 4055 3218811 - 3218821 + G 74 -8.2 -3.89346 | opp_overlap 3218806, overlap 3218809 GGCATTCAAACTGGC CGCC CGT GGCG TTTGTACGCTGGAAG nusA 3217465 - 3218952 + | transcription elongation factor NusA infB 3218977 - 3221625 + | translation initiation factor IF-2 TERM 4056 3221638 - 3221677 + F 93 -15 -3.11634 | opp_overlap 3221652 3221653, overlap 3221652 3221653 TAAGGTTTTTAGGGT TCCATGCGGGATAAGGCG TTTA CGCCGCATCCGGCATGGA TTGCCTGATGTGACG TERM 4057 3221766 - 3221752 - f 74 -5.6 -4.68506 | opp_overlap 3221752 AATTAATTTTAAAAA GGGGCT AAC AGTCCC TTTTTTGTCAGGAGA TERM 4058 3221752 - 3221766 + F 91 -7.8 -5.24129 | opp_overlap 3221752 AATTAATTTTAAAAA GGGGCT AAC AGTCCC TTTTTTGTCAGGAGA TERM 4059 3221851 - 3221840 - g 75 -4.4 -4.82855 | overlap 3221832 CAGGAAATGCAAAAA GAGA TCGC TCTC ATCCTGCAGCGTGAA rbfA 3221789 - 3222190 + | ribosome-binding factor A truB 3222190 - 3223134 + | tRNA pseudouridine synthase B TERM 4060 3223448 - 3223427 - g 85 -2.9 -5.34555 | opp_overlap 3223432, overlap 3223430 3223432 GCAGAGCACAAAAAA GATCACCAC AGCC GTCGTGGTC TGCTGCGCATGGTTT rpsO 3223283 - 3223552 + | 30S ribosomal protein S15 TERM 4061 3223592 - 3223574 - f 77 -7.3 -4.38712 | opp_overlap 3223575, overlap 3223575 CCGAGTTTCAGAAAA GGGGGCC TGAGT GGCCCCT TTTTTCAAGCTGACG TERM 4062 3223591 - 3223575 - f 74 -10.8 -3.22906 | opp_overlap 3223575, overlap 3223574 CGAGTTTCAGAAAAG GGGGCC TGAGT GGCCCC TTTTTTCAAGCTGAC TERM 4063 3223575 - 3223591 + F 100 -10.8 -5.03314 | opp_overlap 3223574 3223575 CGAGTTTCAGAAAAG GGGGCC TGAGT GGCCCC TTTTTTCAAGCTGAC pnp 3223731 - 3225935 + | polynucleotide phosphorylase/polyadenylase TERM 4064 3225947 - 3225968 + F 100 -15.1 -4.07568 | GTAAGGTTGCCATTT GCCCTCCGC TGCG GCGGGGGGC TTTTAACCGGGCAGG yhbM 3226044 - 3226928 + | lipoprotein NlpI TERM 4065 3226963 - 3226988 + F 73 -7.5 -4.04023 | overlap 3226964 GTAATCTTTTTTGAT TGCCATCACCT TAAG GGGTGAGGGCG TTGTTGTTCGTTAAT deaD 3227108 - 3228997 + | ATP-dependent RNA helicase DeaD TERM 4066 3229063 - 3229041 - f 74 -10.6 -3.17888 | opp_overlap 3229041, overlap 3229039 3229037 3229035 AAAATAATATATACA GCCCCGAT TTTTACC ATCGGGGC TTTTTTTCTGTCTTT TERM 4067 3229041 - 3229063 + F 100 -10.6 -5.82281 | opp_overlap 3229041 3229039 3229037 3229035 AAAATAATATATACA GCCCCGAT TTTTACC ATCGGGGC TTTTTTTCTGTCTTT TERM 4068 3229178 - 3229205 + G 76 -10.6 -3.28712 | gap 1, opp_overlap 3229176 3229177 ACCACCACCCAAACG TCACCGTCGCTGC TTG GCGGCG-TGGTGA TTATCGGCGGCACCA TERM 4069 3229254 - 3229270 + G 74 -2.9 -4.9218 | overlap 3229255 TTTCTCTGCCAGTGG TCATGTC CGG GGCGTGG TTTTTCTGGTCAATG TERM 4070 3229525 - 3229542 + G 70 -4 -4.67641 | opp_overlap 3229522 GATGTCGCTAAACGT CCCGGC ACGGGC GGCGGG TTTTGGTTTTGCACT TERM 4071 3230045 - 3230061 + G 70 -4.3 -4.48902 | GTAGCGAGTTCGTTC CTTGGCG TAA CGCTGGG TTTGTTTGACTATCT mtr 3229151 - 3230395 + | tryptophan permease yhbW 3231520 - 3230513 - | hypothetical protein yhbV 3232622 - 3231726 - | hypothetical protein TERM 4072 3231798 - 3231810 + g 86 -9.1 -4.4078 | opp_overlap 3231798 3231797 3231795 TGCCGTCAACAATAG TGGCG CAG CGCCA TTTTCATTAGCGCGG yhbU 3233593 - 3232613 - | putative collagenase TERM 4073 3233187 - 3233165 - G 71 -9 -3.43676 | overlap 3233167 CTGATGAATCGACAA CACGCGCGGC AGC ACCACGCGGG CAACGTCAAAATGGC TERM 4074 3233185 - 3233167 - G 72 -10.2 -3.28814 | overlap 3233165 GATGAATCGACAACA CGCGCGGC AGC ACCACGCG GGCAACGTCAAAATG yhbT 3233802 - 3234326 + | hypothetical protein yhbS 3234320 - 3234823 + | hypothetical protein yhbQ 3235112 - 3234810 - | GIY-YIG nuclease superfamily protein TERM 4075 3235324 - 3235314 - g 100 -8.2 -5.4833 | overlap 3235315 TGACGGAAGAAAAAA CGCG CCA CGCG CAGATGAGTGGGCCG TERM 4076 3235325 - 3235315 - g 74 -8.2 -3.87914 | overlap 3235314 GACGGAAGAAAAAAC GCGC CAC GCGC AGATGAGTGGGCCGC yhbP 3235163 - 3235606 + | hypothetical protein yhbO 3236146 - 3235586 - | hypothetical protein yraR 3236187 - 3236867 + | hypothetical protein yraQ 3236940 - 3237980 + | hypothetical protein TERM 4077 3238028 - 3237993 - T 76 -8.2 -4.1899 | opp_overlap 3238005, overlap 3237995 3237996 3238013 TGATTTGAGGGAAAA CATGTCGGATGCGGCG TAAA CGCCTTATCCGACCTA CGGTTTGCATCGTTG TERM 4078 3238026 - 3237995 - T 72 -8.6 -3.69483 | opp_overlap 3238005, overlap 3237993 3237996 3238013 ATTTGAGGGAAAACA TGTCGGATGCGGCG TAAA CGCCTTATCCGACC TACGGTTTGCATCGT TERM 4079 3238025 - 3237996 - T 77 -12.1 -2.81208 | opp_overlap 3238005, overlap 3237995 3237993 3238013 TTTGAGGGAAAACAT GTCGGATGCGGCG TAAA CGCCTTATCCGAC CTACGGTTTGCATCG yraP 3238669 - 3238094 - | hypothetical protein yraO 3239269 - 3238679 - | DnaA initiator-associating protein DiaA yraN 3239684 - 3239289 - | hypothetical protein yraM 3241669 - 3239642 - | putative glycosylase TERM 4080 3241253 - 3241271 + gH 78 -5.3 -4.79352 | opp_overlap 3241224 3241221, overlap 3241259 3241260 3241262 3241264 ATCGATTTTTGCCTG CCAGTAA CGCGC TTGCTGG TTTTGTTCTAAATCG TERM 4081 3241538 - 3241526 - GH 72 -4.7 -4.66537 | overlap 3241527 3241534 CTGCTGAAGATAAAA GGCAG AAT CAGCC TGCGCCGTGCCCTGC TERM 4082 3241674 - 3241685 + H 79 -3 -5.41143 | GAGGGTACCATAATG TATC CAGT GATA TTTTTTTACGCAATG yraL 3241733 - 3242593 + | hypothetical protein TERM 4083 3242601 - 3242633 + F 89 -11.5 -4.07885 | gap 1, overlap 3242604 AGGGGTAACAGTGCC GAAG-CGTTGCGTT AATCAA AACGCAACGTCTTC TTTTACCGCACCATG TERM 4084 3242604 - 3242630 + F 73 -7.4 -4.17048 | gap 1, overlap 3242601 GGTAACAGTGCCGAA G-CGTTGCGTT AATCAA AACGCAACGTC TTCTTTTACCGCACC TERM 4085 3242852 - 3242864 + F 70 -9.1 -3.46117 | overlap 3242860 GTCTGAACTTCTTCG CCTGG CGA CCAGG TTGTACTGGTCTACT TERM 4086 3243303 - 3243324 + F 72 -3 -5.07275 | ACACCCGTTTGGGTT GCAGCA GAATATACGG TGCTGC TTTTTATCTGTGTGA SBO_3237 3243534 - 3243809 + | IS629 ORF1 TERM 4087 3244129 - 3244117 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_3238 3243809 - 3244696 + | IS629 ORF2 yraJ 3247384 - 3245051 - | putative outer membrane protein TERM 4088 3246438 - 3246462 + g 71 -9.2 -3.42605 | overlap 3246436 3246433 TCACTGTTTGCATCA GCGCGATAGC GTCCA GCGGTCGCGC TATATTTTAGATGCC SBO_3241 3247843 - 3248193 + | putative protein encoded within IS TERM 4089 3248228 - 3248197 - f 72 -5.2 -4.60255 | gap 1, overlap 3248198 3248199 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 4090 3248227 - 3248199 - f 71 -10.3 -2.60776 | overlap 3248197 3248198 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_3242 3248413 - 3248751 + | putative protein encoded within IS SBO_3243 3248821 - 3249816 + | putative protein encoded within IS TERM 4091 3249845 - 3249814 - T 76 -7.5 -4.258 | gap 2, opp_overlap 3249814 3249813 3249817 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CTTTTATTCAGCCAG insB 3250603 - 3250208 - | IS1 ORF2 SBO_3245 3251026 - 3251931 + | insertion element IS2 transposase InsD SBO_3246 3252122 - 3252301 + | putative IS1 encoded protein SBO_3247 3252485 - 3252270 - | hypothetical protein gatY 3253375 - 3252521 - | tagatose-bisphosphate aldolase agaR 3253718 - 3254548 + | putative DEOR-type transcriptional regulator of aga operon TERM 4092 3255198 - 3255182 - g 71 -3 -4.82901 | opp_overlap 3255182 3255197 CGCGCGTCACAAAAA TCTGTC AGAAG AACAGA TTGTTAGCGATCTTC SBO_3250 3254580 - 3255515 + | carbohydrate kinase yhdT 3255608 - 3255850 + | hypothetical protein TERM 4093 3256357 - 3256369 + G 70 -10.5 -2.71791 | overlap 3256347 3256356 GCATTGCGTTGTATA CCGCC TTT GGCGG CTTTCGCGCCAGCGT panF 3255840 - 3257291 + | sodium/panthothenate symporter TERM 4094 3257366 - 3257394 + G 77 -8.9 -4.11216 | opp_overlap 3257331 3257375, overlap 3257367 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 4095 3257367 - 3257393 + G 79 -12.4 -3.06515 | opp_overlap 3257331 3257375, overlap 3257366 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3257303 - 3258184 + | ribosomal protein L11 methyltransferase TERM 4096 3258278 - 3258238 - f 90 -9.9 -4.43189 | opp_overlap 3258236 AGCAAGCTCACAAAA GGCACGTAAATTTGC CGGTTATTTAC GCAAATTTGCGTGCC AAAATTTTCATTCAT TERM 4097 3258318 - 3258303 - f 81 -3.3 -5.38958 | opp_overlap 3258303, overlap 3258314 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTTGAATGTA TERM 4098 3258478 - 3258464 - f 76 -4.2 -5.00884 | overlap 3258465 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG yhdG 3258513 - 3259478 + | tRNA-dihydrouridine synthase B fis 3259504 - 3259800 + | DNA-binding protein Fis TERM 4099 3259830 - 3259855 + F 100 -8.2 -5.29782 | opp_overlap 3259830 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4100 3259855 - 3259830 - f 74 -6 -4.7254 | opp_overlap 3259830 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4101 3260721 - 3260707 - g 88 -5.6 -5.21683 | AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCCGGTT yhdJ 3259886 - 3260770 + | putative methyltransferase yhdU 3260854 - 3261033 + | hypothetical protein envR 3261698 - 3261036 - | DNA-binding transcriptional regulator EnvR acrE 3262097 - 3263215 + | AcrE acrF 3263267 - 3266371 + | integral transmembrane protein TERM 4102 3266407 - 3266380 - f 71 -7.1 -4.18303 | opp_overlap 3266382 3266386, overlap 3266382 3266386 AGGATAAATCAGAAA CATAAAGGCAC TTTCGG GTGCCTTTATT ATTTTCAGTGAAACC TERM 4103 3266382 - 3266405 + F 90 -10.4 -4.21812 | opp_overlap 3266380 3266382 3266386, overlap 3266386 GATAAATCAGAAACA TAAAGGCACT TTCG GGTGCCTTTA TTATTTTCAGTGAAA TERM 4104 3266405 - 3266382 - f 79 -9.7 -3.67823 | opp_overlap 3266382 3266386, overlap 3266380 3266386 GATAAATCAGAAACA TAAAGGCAC TTTCGG GTGCCTTTA TTATTTTCAGTGAAA TERM 4105 3266386 - 3266401 + F 80 -6.8 -4.68601 | opp_overlap 3266382 3266380 3266386, overlap 3266382 AATCAGAAACATAAA GGCACT TTCG GGTGCC TTTATTATTTTCAGT TERM 4106 3266401 - 3266386 - f 75 -6.1 -4.42513 | opp_overlap 3266386 3266382, overlap 3266382 3266380 AATCAGAAACATAAA GGCAC TTTCGG GTGCC TTTATTATTTTCAGT yhdV 3266624 - 3266845 + | hypothetical protein TERM 4107 3266879 - 3266846 - f 71 -7.4 -3.90744 | opp_overlap 3266851, overlap 3266851 GCTCTGTCGAAATAA CTGAACAGGGCGCG GAGTTT CGCGCTCTGTTTAA CGATACAGTATCTTT TERM 4108 3266851 - 3266874 + F 88 -12.4 -3.57462 | opp_overlap 3266846 3266851 GTCGAAATAACTGAA CAGGGCGCGG AGTT TCGCGCTCTG TTTAACGATACAGTA TERM 4109 3266874 - 3266851 - f 73 -9.5 -3.33509 | opp_overlap 3266851, overlap 3266846 GTCGAAATAACTGAA CAGGGCGCG GAGTTT CGCGCTCTG TTTAACGATACAGTA TERM 4110 3267072 - 3267090 + F 83 -10.3 -3.695 | opp_overlap 3267060 3267069 3267067, overlap 3267070 CACGCGTAAATATTT TGCGCCA AAATG TGGCGCA TGTTTCATTTTCGCA TERM 4111 3267241 - 3267225 - f 87 -9.5 -4.27259 | opp_overlap 3267227, overlap 3267238 CACAGACAGGTAAAA GACGTTT CCC AAACGTC CTATAACGATAATTT yhdW 3267384 - 3268349 + | putative periplasmic binding transport protein TERM 4112 3268366 - 3268387 + F 85 -13.7 -3.07233 | opp_overlap 3268365 3268368, overlap 3268368 3268383 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC TERM 4113 3268368 - 3268385 + F 73 -10.5 -3.09135 | opp_overlap 3268368 3268365, overlap 3268366 3268383 GGTGTGAGGTAACGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT TERM 4114 3268937 - 3268961 + F 74 -7.1 -4.30933 | TCGTGGGCTTTATAT TCCGTCACC GCAGCTG GGAGACGGA TTTATTGCGTTTATC TERM 4115 3270616 - 3270628 + G 73 -4.1 -4.87803 | TGTTTTCGCCGCGCT GATCT ACT GGATC TTTTGTTTCAGCATG yhdY 3269594 - 3270700 + | putative transport system permease protein yhdZ 3270708 - 3271466 + | putative ATP-binding component of a transport system TERM 4116 3271482 - 3271523 + F 100 -17.5 -3.88498 | opp_overlap 3271493, overlap 3271483 3271493 TTGAATGTTAGTTCG AAAAGCAAAAAGGCCATCC TTTC GGATGGCCTTTTTGCTTGA TTTGATGTCTGGCAG TERM 4117 3271483 - 3271522 + F 100 -21 -2.92777 | opp_overlap 3271493, overlap 3271482 3271493 TGAATGTTAGTTCGA AAAGCAAAAAGGCCATCC TTTC GGATGGCCTTTTTGCTTG ATTTGATGTCTGGCA TERM 4118 3271512 - 3271493 - f 100 -13.6 -5.0925 | opp_overlap 3271483 3271482 3271493 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTTTGCTTGATTTG TERM 4119 3271493 - 3271512 + F 100 -13.6 -4.95957 | opp_overlap 3271493, overlap 3271483 3271482 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTTTGCTTGATTTG TERM 4120 3271595 - 3271609 + F 71 -7.8 -3.99324 | opp_overlap 3271595 TTCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTGTCCTACTCGAG TERM 4121 3271695 - 3271646 - f 100 -21.1 -4.09117 | opp_overlap 3271650 3271655 3271660, overlap 3271655 3271660 TTCACCGACAAACAA CAGATAAAACAAAAGGCTCAGTC GGAA GACTGGGCCTTTTGTTTTATTTG ATGTCTGGCAGTTCC TERM 4122 3271650 - 3271691 + F 100 -22.7 -3.88498 | opp_overlap 3271646 3271655 3271660, overlap 3271655 3271660 CCGACAAACAACAGA TAAAACAAAAGGCTCAGTC GGAA GACTGGGCCTTTTGTTTTA TTTGATGTCTGGCAG TERM 4123 3271686 - 3271655 - f 100 -16 -4.74989 | opp_overlap 3271650 3271655 3271660, overlap 3271646 3271660 AAACAACAGATAAAA CAAAAGGCTCAGTC GGAA GACTGGGCCTTTTG TTTTATTTGATGTCT TERM 4124 3271655 - 3271686 + F 100 -18.2 -4.98061 | opp_overlap 3271655 3271646 3271660, overlap 3271650 3271660 AAACAACAGATAAAA CAAAAGGCTCAGTC GGAA GACTGGGCCTTTTG TTTTATTTGATGTCT TERM 4125 3271681 - 3271660 - f 100 -10.1 -5.24647 | opp_overlap 3271655 3271650 3271660, overlap 3271655 3271646 ACAGATAAAACAAAA GGCTCAGTC GGAA GACTGGGCC TTTTGTTTTATTTGA TERM 4126 3271660 - 3271681 + F 100 -12.3 -5.34857 | opp_overlap 3271660 3271655 3271646, overlap 3271655 3271650 ACAGATAAAACAAAA GGCTCAGTC GGAA GACTGGGCC TTTTGTTTTATTTGA TERM 4127 3272073 - 3272094 + F 74 -8.7 -3.91196 | opp_overlap 3272064 GCAAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4128 3274562 - 3274574 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4129 3275116 - 3275140 + F 71 -8 -3.93061 | gap 1, opp_overlap 3275122 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4130 3275179 - 3275216 + F 93 -6.3 -5.68438 | opp_overlap 3275175 3275181, overlap 3275181 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTTC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4131 3275181 - 3275214 + F 86 -8.9 -4.47052 | opp_overlap 3275175 3275181, overlap 3275179 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4132 3275214 - 3275181 - f 75 -6.7 -4.49756 | opp_overlap 3275179 3275181, overlap 3275175 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4133 3277226 - 3277238 + F 71 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4134 3277258 - 3277272 + F 86 -4.2 -5.50925 | opp_overlap 3277258, overlap 3277247 3277259 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTTCTCTTCGTT TERM 4135 3277259 - 3277271 + F 71 -7.7 -3.88115 | opp_overlap 3277258, overlap 3277247 3277258 TCTTTCAGAGTCAAC CCTGA ATT TCAGG ATTTTTTCTCTTCGT yrdA 3277374 - 3278072 + | putative transferase yrdB 3278305 - 3278048 - | hypothetical protein aroE 3279120 - 3278302 - | shikimate 5-dehydrogenase yrdC 3279697 - 3279125 - | putative ribosome maturation factor yrdD 3280220 - 3279702 - | putative DNA topoisomerase TERM 4136 3279757 - 3279747 - G 70 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 4137 3280118 - 3280082 - G 89 -13.1 -3.34233 | overlap 3280085 3280111 CCAGAACTTTGACAA TATGTCCATCCGCTGAA GAT TTCAGAGGACGGACGTA GTCACACGCCGGATA TERM 4138 3280115 - 3280085 - G 89 -14.8 -2.53747 | overlap 3280082 3280111 GAACTTTGACAATAT GTCCATCCGCTGAA GAT TTCAGAGGACGGAC GTAGTCACACGCCGG smg 3280746 - 3280273 - | hypothetical protein TERM 4139 3280581 - 3280599 + gr 74 -6 -4.57569 | TCGGTTCTGCCAACC CTTCCTGA TAA TCAGCAAG TTTTTCCAGCCATAG smf 3281842 - 3280718 - | hypothetical protein def 3281972 - 3282481 + | peptide deformylase TERM 4140 3282542 - 3282564 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 4141 3282644 - 3282634 - g 74 -3.2 -5.02074 | GGACGCGGTAAAAAA CTGA TGC CCAG CCCGGTTAAAGTTCT TERM 4142 3282727 - 3282717 - g 85 -6.8 -4.77165 | overlap 3282718 GCGTCCACAAGAAAA CCAG CAA CTGG TCGCCGATCTGCAGG fmt 3282496 - 3283443 + | methionyl-tRNA formyltransferase TERM 4143 3283459 - 3283477 + F 100 -10.2 -5.01535 | overlap 3283460 TAGTCCACTCTTCTA AGCCCGGT CTT ACCGGGCA TTTTTATACTTATGA TERM 4144 3283460 - 3283476 + F 93 -13.7 -3.59837 | overlap 3283459 AGTCCACTCTTCTAA GCCCGGT CTT ACCGGGC ATTTTTATACTTATG TERM 4145 3283514 - 3283498 - g 88 -5.1 -5.17353 | overlap 3283501 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCCCAGGC TERM 4146 3283511 - 3283501 - g 75 -5.4 -4.67552 | overlap 3283498 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCCCA TERM 4147 3283637 - 3283651 + G 77 -10 -3.60971 | opp_overlap 3283606 AAGAGTTGTGCTTTG GCGTAC TGC GTACGC TTTCGCAGTTAGACT sun 3283489 - 3284778 + | 16S rRNA methyltransferase B trkA 3284800 - 3286176 + | potassium transporter peripheral membrane component TERM 4148 3286178 - 3286205 + F 100 -15.8 -3.89938 | opp_overlap 3286181 3286184, overlap 3286181 3286184 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT TERM 4149 3286202 - 3286181 - f 86 -13.1 -3.33696 | opp_overlap 3286178 3286181 3286184, overlap 3286184 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4150 3286181 - 3286202 + F 95 -13.1 -4.05629 | opp_overlap 3286181 3286184, overlap 3286178 3286184 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4151 3286199 - 3286184 - f 83 -10.4 -3.81146 | opp_overlap 3286181 3286178 3286184, overlap 3286181 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4152 3286184 - 3286199 + F 87 -10.4 -4.13254 | opp_overlap 3286184 3286181, overlap 3286181 3286178 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT mscL 3286306 - 3286716 + | large-conductance mechanosensitive channel TERM 4153 3286779 - 3286733 - T 93 -16.1 -2.90992 | overlap 3286736 AAGCGCCTGAAAGCA GAAGACCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCCCGATTG TERM 4154 3286776 - 3286736 - T 93 -14.2 -3.60151 | overlap 3286733 CGCCTGAAAGCAGAA GACCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCCCGA yhdL 3286931 - 3286713 - | hypothetical protein zntR 3287412 - 3286987 - | zinc-responsive transcriptional regulator TERM 4155 3287075 - 3287049 - G 74 -5.9 -4.4846 | gap 1, overlap 3287051 GAATCGAACAATAAA CACTGCTATGGG CGGT CCCACAACAG-G CATCGTTAAGGCGTT TERM 4156 3287074 - 3287051 - G 76 -9.6 -3.83566 | overlap 3287049 ATCGAACAATAAACA CTGCTATGGG CGGT CCCACAACAG GCATCGTTAAGGCGT yhdN 3287791 - 3287423 - | hypothetical protein TERM 4157 3287854 - 3287887 + r 82 -11.9 -3.37879 | opp_overlap 3287850 3287864, overlap 3287855 3287864 TGGGGATACTACGGG TATAAAAAAACCCGC CGGG GCGGGTTTTTTTACG TTGCTTCAGATTACT TERM 4158 3287855 - 3287886 + r 81 -13.2 -2.62246 | opp_overlap 3287850 3287864, overlap 3287854 3287864 GGGGATACTACGGGT ATAAAAAAACCCGC CGGG GCGGGTTTTTTTAC GTTGCTTCAGATTAC TERM 4159 3287877 - 3287864 - R 100 -9.5 -5.61596 | opp_overlap 3287855 3287854 3287864, overlap 3287850 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4160 3287864 - 3287877 + r 100 -9.5 -5.54192 | opp_overlap 3287850 3287864, overlap 3287855 3287854 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4161 3287887 - 3287912 + r 72 -8.3 -3.67102 | overlap 3287908 GGCGGGTTTTTTTAC GTTGCTTCAGA TTAC TCTGCAGCAGC TTCTGCTTTCTCTGA TERM 4162 3287908 - 3287918 + r 71 -6.8 -4.0371 | overlap 3287887 TCAGATTACTCTGCA GCAG CTT CTGC TTTCTCTGAACGATC rplQ 3288281 - 3287898 - | 50S ribosomal protein L17 rpoA 3289311 - 3288322 - | DNA-directed RNA polymerase subunit alpha TERM 4163 3288405 - 3288417 + g 74 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCAAGGTT TERM 4164 3289352 - 3289334 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3289957 - 3289337 - | 30S ribosomal protein S4 TERM 4165 3289447 - 3289457 + g 70 -6.8 -4.12188 | overlap 3289444 CAGCATCAACTTCCA GCCA AGT TGGC TTTTCACGCTGCTCA TERM 4166 3289984 - 3290002 + r 76 -4.4 -5.00616 | opp_overlap 3289975 3289984 AACAAACCTGGAAAA CGAGGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3290380 - 3289991 - | 30S ribosomal protein S11 TERM 4167 3290414 - 3290439 + r 70 -8.9 -3.39449 | overlap 3290415 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 4168 3290415 - 3290438 + r 71 -10.2 -2.63348 | overlap 3290414 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG rpsM 3290753 - 3290397 - | 30S ribosomal protein S13 TERM 4169 3290578 - 3290596 + g 77 -8.8 -4.05446 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTCCTTCAGACA TERM 4170 3290870 - 3290841 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 3291016 - 3290900 - | 50S ribosomal protein L36 secY 3292379 - 3291048 - | preprotein translocase subunit SecY TERM 4171 3291581 - 3291535 - G 73 -9.4 -3.56921 | opp_overlap 3291541 3291549, overlap 3291533 GGGAACAGAATAATA CTGGAAGCGAAGATTGCCGGGA TTA CCCCCGCCATATTCACTTTCAG CGGTAAATGTGTGCT TERM 4172 3291946 - 3291915 - G 74 -10.2 -3.51032 | opp_overlap 3291921, overlap 3291921 AGCGGTGAAGTAGAA TGCAAAGCCCGG GTTAATCA CCAGGCCTTGCA TACCAGGCATATTCG rplO 3292821 - 3292387 - | 50S ribosomal protein L15 rpmD 3293004 - 3292825 - | 50S ribosomal protein L30 rpsE 3293511 - 3293008 - | 30S ribosomal protein S5 rplR 3293879 - 3293526 - | 50S ribosomal protein L18 rplF 3294422 - 3293889 - | 50S ribosomal protein L6 rpsH 3294827 - 3294435 - | 30S ribosomal protein S8 rpsN 3295166 - 3294861 - | 30S ribosomal protein S14 rplE 3295720 - 3295181 - | 50S ribosomal protein L5 TERM 4173 3295558 - 3295576 + g 93 -6 -5.24531 | TTGCTGCCAAGTCTG CTGCTG CGTTATC CAGCAG TTTTTTGTCAGCGAT TERM 4174 3295664 - 3295675 + g 81 -4.4 -5.12617 | opp_overlap 3295664, overlap 3295643 AGAATTGTAGTTAAA CTCA GTCA TGAG TTTTTTAACTACTTC rplX 3296049 - 3295735 - | 50S ribosomal protein L24 rplN 3296431 - 3296060 - | 50S ribosomal protein L14 TERM 4175 3296571 - 3296546 - R 100 -14.9 -5.252 | opp_overlap 3296546 3296550 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4176 3296546 - 3296571 + r 90 -14.9 -3.25823 | opp_overlap 3296546, overlap 3296550 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4177 3296550 - 3296567 + r 91 -11.3 -4.29106 | opp_overlap 3296546, overlap 3296546 GGTAGAAAAAATAAA CGGCTCA TTTC TGAGCCG TTTATTCGTATCGAG rpsQ 3296850 - 3296596 - | 30S ribosomal protein S17 TERM 4178 3296818 - 3296771 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 3296790 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA rpmC 3297041 - 3296850 - | 50S ribosomal protein L29 rplP 3297451 - 3297041 - | 50S ribosomal protein L16 rpsC 3298165 - 3297464 - | 30S ribosomal protein S3 rplV 3298515 - 3298183 - | 50S ribosomal protein L22 rpsS 3298808 - 3298530 - | 30S ribosomal protein S19 rplB 3299646 - 3298825 - | 50S ribosomal protein L2 TERM 4179 3299682 - 3299702 + r 75 -9.7 -3.57462 | opp_overlap 3299685, overlap 3299685 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3299966 - 3299664 - | 50S ribosomal protein L23 TERM 4180 3299933 - 3299921 - G 78 -9.1 -3.85817 | ACGCTTTTTCAGAAA CGTGC GGT GCACG CAGCACCTTCAGCAG rplD 3300568 - 3299963 - | 50S ribosomal protein L4 TERM 4181 3300536 - 3300548 + g 78 -10.5 -3.42663 | opp_overlap 3300531, overlap 3300535 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3301208 - 3300579 - | 50S ribosomal protein L3 rpsJ 3301552 - 3301241 - | 30S ribosomal protein S10 TERM 4182 3302013 - 3302051 + r 71 -3.9 -4.84311 | gap 1, overlap 3302015 CAAAGCATGGCTTGT TACCTGA-CAGATTTACG TGCC CGTTACTCTGGTCAGGTC TTTTGTTCTATCAAG TERM 4183 3302415 - 3302390 - R 72 -9.1 -3.61398 | opp_overlap 3302390 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 4184 3302390 - 3302415 + r 100 -9.8 -5.61596 | opp_overlap 3302390 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SBO_3316 3303414 - 3302509 - | insertion element IS2 transposase InsD SBO_3317 3303737 - 3303372 - | insertion sequence 2 OrfA protein SBO_3318 3303801 - 3305087 + | IS4 orf TERM 4185 3305098 - 3305069 - T 89 -9.3 -4.59109 | opp_overlap 3305070 3305071 3305094, overlap 3305071 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTGCCTTTTGGGC TERM 4186 3305070 - 3305097 + T 81 -12.8 -3.27786 | opp_overlap 3305069 3305071, overlap 3305071 3305094 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTGCCTTTTGGG TERM 4187 3305096 - 3305071 - T 100 -16.3 -3.90762 | opp_overlap 3305070 3305071 3305094, overlap 3305069 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTGCCTTTTGG TERM 4188 3305071 - 3305096 + T 90 -16.3 -2.5619 | opp_overlap 3305071 3305069, overlap 3305070 3305094 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTGCCTTTTGG bfr 3305645 - 3305169 - | bacterioferritin, iron storage and detoxification protein TERM 4189 3305486 - 3305462 - G 79 -2.2 -5.26119 | gap 1, opp_overlap 3305462 3305464, overlap 3305457 3305464 CTTCTAAAAACAAAA TACGCTCGATA TATT TATC-AGCGTG TTTCATCTCATCGAT TERM 4190 3306065 - 3306050 - R 100 -11.8 -4.72986 | opp_overlap 3306050 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC TERM 4191 3306050 - 3306065 + r 95 -11.8 -4.27316 | opp_overlap 3306050 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC tufA 3307279 - 3306095 - | elongation factor Tu TERM 4192 3307058 - 3307108 + g 74 -2.5 -5.06414 | overlap 3307028 3307060 GTGTGCGTAGTGACG GGTCGGGGTGTCATATTCAACGT GAGAA GTGTTGATGGTGATACCACGAGC TTTTTCTTCCGGCGC TERM 4193 3307324 - 3307299 - R 93 -15.5 -2.78935 | opp_overlap 3307295 3307294 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA fusA 3309464 - 3307350 - | elongation factor G TERM 4194 3309536 - 3309511 - R 82 -11.2 -3.63895 | gap 1, opp_overlap 3309501, overlap 3309501 TTTAAGTAGCCCAAA GCGGGCTGCTT ACTGG AAGC-GCCCGC CTGGTGACTAAAACT rpsG 3310031 - 3309561 - | 30S ribosomal protein S7 rpsL 3310502 - 3310128 - | 30S ribosomal protein S12 TERM 4195 3310572 - 3310550 - R 100 -12.8 -4.7268 | AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG yheM 3311282 - 3310923 - | hypothetical protein yheN 3311668 - 3311282 - | hypothetical protein yheO 3312402 - 3311668 - | hypothetical protein TERM 4196 3312185 - 3312216 + g 76 -7.4 -4.21194 | gap 1 ATCTTCCGGCCTGTA TGTTCA-CCGTTAGC AAT GCGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4197 3312415 - 3312402 - R 78 -6.7 -4.59226 | opp_overlap 3312412 3312413 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTAACTTT TERM 4198 3312474 - 3312486 + r 72 -9.1 -3.54919 | opp_overlap 3312474 3312472 3312470 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 4199 3312513 - 3312556 + r 72 -4.7 -4.61482 | gap 2, opp_overlap 3312525, overlap 3312514 3312525 AATTATATCCGGCCT GTAATAAAAAAACCGCCGCCT GGTC AGGCGGCGG--TTCTTAATGC TTATTTTTTAGCAGA TERM 4200 3312514 - 3312559 + r 76 -4.2 -5.0133 | gap 2, opp_overlap 3312525, overlap 3312513 3312525 ATTATATCCGGCCTG TAA-TA-AAAAAACCGCCGCCT GGTC AGGCGGCGGTTCTTAATGCTTA TTTTTTAGCAGAATC TERM 4201 3312525 - 3312546 + r 100 -17.3 -3.79396 | opp_overlap 3312525, overlap 3312513 3312514 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT TERM 4202 3312546 - 3312525 - R 100 -17.3 -5.7946 | opp_overlap 3312525 3312513 3312514 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT fkpA 3313369 - 3312557 - | FKBP-type peptidyl-prolyl cis-trans isomerase slyX 3313590 - 3313808 + | hypothetical protein TERM 4203 3313809 - 3313847 + T 100 -14.6 -4.29325 | opp_overlap 3313821, overlap 3313821 CCGCCACATTATTGA GGCGTAAAAAAAGCGGGG ATT CCCCGCTTTTTTGTCACC TTTTCGGTATTAGTG TERM 4204 3313821 - 3313835 + T 100 -12.8 -5.28826 | opp_overlap 3313821, overlap 3313809 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT TERM 4205 3313835 - 3313821 - T 100 -12.8 -5.42259 | opp_overlap 3313821 3313809 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT slyD 3314447 - 3313857 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4206 3314135 - 3314149 + g 71 -9.2 -3.53012 | TGATTTCAACCGGTA CCGGCC CCT GGTCGG TTTCAGCCAGGAAAC TERM 4207 3314421 - 3314432 + g 72 -5.8 -4.39989 | overlap 3314405 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT kefB 3316563 - 3314752 - | glutathione-regulated potassium-efflux system protein KefB yheR 3317117 - 3316563 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 4208 3318542 - 3318518 - g 93 -12.9 -3.60798 | overlap 3318514 3318527 AGGGCGATAAAGTAA CCGAAGAAACG CGC CGCTTCTCCGG TGGGGAAAAAGCCCG TERM 4209 3318569 - 3318553 - g 70 -5 -4.56597 | opp_overlap 3318553, overlap 3318527 TCCGGTGGGGAAAAA GCCCGC CTGGT GCTGGC ATTAATTGTCTGGCA yheS 3317245 - 3319158 + | putative ABC transporter ATP-binding protein TERM 4210 3319311 - 3319324 + G 70 -4.5 -4.45083 | TGGCAGCGGCTGGAG TTGCC CGAC GGCGA TTTTGTCGATCTCGC yheT 3319158 - 3320180 + | putative hydrolase TERM 4211 3320312 - 3320288 - g 78 -8.5 -4.20769 | ACACTTGAACAGAAA GTCGCCGACGT CAA ACGCCAGCTAC AGTGCGGAGAAGCGG yheU 3320174 - 3320392 + | hypothetical protein prkB 3320446 - 3321315 + | phosphoribulokinase yhfA 3321621 - 3321370 - | hypothetical protein TERM 4212 3323010 - 3323038 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SBO_3337 3321867 - 3323063 + | ISSfl2 ORF SBO_3338 3323680 - 3324585 + | insertion element IS2 transposase InsD TERM 4213 3324973 - 3324948 - g 70 -10.5 -2.76171 | overlap 3324945 ACCCATCCAAGAGCA CGCTTATTCAC CAGG GTGAAAAAGCG GAAACGCTGTACTAC crp 3324863 - 3325495 + | cAMP-regulatory protein TERM 4214 3325507 - 3325531 + F 100 -16.5 -4.86731 | overlap 3325497 TTAATCCCGTCGGAG TGGCGCGTTAC CTG GTAGCGCGCCA TTTTGTTTCCCCCGA TERM 4215 3327104 - 3327094 - g 70 -4.6 -4.58395 | opp_overlap 3327094 GTTATTGCGTAAAAA CGCC CAT GACG CTTTAGAAGCCTATC yhfK 3326324 - 3327637 + | hypothetical protein argD 3328924 - 3327704 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein pabA 3329573 - 3329010 - | para-aminobenzoate synthase component II fic 3330207 - 3329605 - | cell filamentation protein Fic TERM 4216 3329902 - 3329916 + g 83 -5.6 -5.03994 | overlap 3329904 CTCCAGATCCTGCAT CAGGGC ATT GCCCTC TTTTTCTATATAAGC TERM 4217 3329904 - 3329914 + g 77 -8.2 -4.14422 | overlap 3329902 CCAGATCCTGCATCA GGGC ATT GCCC TCTTTTTCTATATAA yhfG 3330364 - 3330197 - | hypothetical protein TERM 4218 3330459 - 3330438 - R 100 -17.3 -3.46602 | GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG ppiA 3331041 - 3330469 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4219 3331267 - 3331286 + H 73 -2.1 -5.26119 | overlap 3331268 AAAATCACCCGCTCG CGGCATA TCCCGC TATGCCA TTTTATTTTTGAACG TERM 4220 3331358 - 3331381 + G 72 -8.8 -3.78934 | GGATTAGCTTTCTCT CCTACGCACT GACT GGTGCGTTGG TTATTGTCACCGGGA TERM 4221 3331696 - 3331713 + G 74 -7.7 -4.015 | gap 1, overlap 3331700 ATGTATGAAGGGCGT CAGCGCGG TTC CCGC-CTG TTATTTACTGACTCC TERM 4222 3331905 - 3331895 - g 85 -6.8 -4.76644 | AACATGCACCAAAAA CGGA TGC TCCG GTAGAGAAAGAAAAG yhfC 3331312 - 3332493 + | hypothetical protein TERM 4223 3332501 - 3332528 + F 93 -10.5 -4.39166 | overlap 3332502 CTCATTAATTGCTAA TGCCGGACGGC ACTATC GTCGTCCGGCC TTTTCCTCTCTAACC TERM 4224 3332502 - 3332527 + F 86 -14 -3.23018 | overlap 3332501 TCATTAATTGCTAAT GCCGGACGGC ACTATC GTCGTCCGGC CTTTTCCTCTCTAAC TERM 4225 3332671 - 3332652 - f 77 -10.8 -3.36538 | opp_overlap 3332656 TATACAAATCAGCAA TATACCCC TTAA GGGGTATA TAAAGGTGAATTTGA nirB 3332755 - 3335298 + | nitrite reductase (NAD(P)H) subunit TERM 4226 3335506 - 3335521 + G 70 -6.1 -4.28774 | opp_overlap 3335517 TGTGGGTCGCCAGCC CGCTG AAAAAA CAGCG TTTTCGCTTAAGTGA TERM 4227 3335530 - 3335517 - g 71 -2.3 -5.00884 | opp_overlap 3335506 3335525 AGCCCGCTGAAAAAA CAGCG TTTT CGCTT AAGTGATGGCTTGTG nirD 3335295 - 3335621 + | nitrite reductase small subunit TERM 4228 3335630 - 3335650 + F 89 -8.9 -4.68994 | overlap 3335631 CGGTTAATGTTTTAA CGGGAGGCG CAA TGCCTCCCC TTTTTGCATGGTCCT TERM 4229 3335631 - 3335649 + F 85 -12.4 -3.40674 | overlap 3335630 GGTTAATGTTTTAAC GGGAGGCG CAA TGCCTCCC CTTTTTGCATGGTCC TERM 4230 3335660 - 3335693 + F 100 -8.3 -5.16472 | gap 1, overlap 3335661 CTCCCCTTTTTGCAT GGTCCTGTAAT-TACC TTC GGTATATTGCAGGACA TTTTTTAAACTTTTT TERM 4231 3335661 - 3335692 + F 93 -11.8 -3.67443 | gap 1, overlap 3335660 TCCCCTTTTTGCATG GTCCTGTAAT-TACC TTC GGTATATTGCAGGAC ATTTTTTAAACTTTT TERM 4232 3336201 - 3336184 - g 74 -7.7 -4.07568 | opp_overlap 3336184 TCGCGCTGGCTAAAA CCACTGC ACCG GCAATGG TACTCTTCTTCAAAG nirC 3335748 - 3336554 + | nitrite transporter NirC TERM 4233 3337353 - 3337368 + G 82 -9 -4.25104 | ATGAATCTGGTACGC CGCGAT GCTG ATCGCG TTTTCGTCGGCAAAC TERM 4234 3337838 - 3337802 - g 81 -9.3 -4.11484 | opp_overlap 3337814, overlap 3337807 GGCAATTGTCGAAAA CGGAACGGCAGTCACGC AGC GCGTGATTGACGGTACG CTCACGCAACTCGGT TERM 4235 3337833 - 3337807 - g 76 -10.8 -3.36823 | opp_overlap 3337814, overlap 3337802 TTGTCGAAAACGGAA CGGCAGTCACGC AGC GCGTGATTGACG GTACGCTCACGCAAC cysG 3336573 - 3337946 + | siroheme synthase TERM 4236 3337956 - 3337973 + T 86 -11.3 -3.74762 | CATTAATTTAACCCG GGCCAGA GAAT TCTGGCC TTCTTAATGACTCTT TERM 4237 3338049 - 3338011 - T 76 -4 -4.9448 | opp_overlap 3338013, overlap 3338013 ATTCAGCAAATAAAA CATAACCCCTTAATAAAT ATT ATCTGCTAATGGGTTATA TTCACCGTTACAGCG SBO_3351 3338348 - 3338166 - | putative IS1 encoded protein insB 3338441 - 3338881 + | IS1 ORF2 SBO_3353 3339378 - 3339728 + | putative protein encoded within IS TERM 4238 3339763 - 3339732 - f 72 -5.2 -4.60255 | gap 1, overlap 3339733 3339734 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 4239 3339762 - 3339734 - f 71 -10.3 -2.60776 | overlap 3339732 3339733 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_3354 3339948 - 3340286 + | putative protein encoded within IS SBO_3355 3340356 - 3340772 + | putative protein encoded within IS SBO_3356 3340785 - 3341351 + | putative protein encoded within IS TERM 4240 3341380 - 3341349 - f 76 -7.5 -4.258 | gap 2 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CGACGGAAGTCACTG yhfL 3341493 - 3341660 + | hypothetical protein TERM 4241 3341700 - 3341727 + F 93 -10.6 -4.65722 | gap 1, overlap 3341702 CCGGTTTAATTGCCC GACGCCCTCTGGA TTT TCC-GAGGGCGTA TTTGTTTCTATATCC TERM 4242 3341702 - 3341725 + F 95 -13.2 -3.92887 | gap 1, overlap 3341700 GGTTTAATTGCCCGA CGCCCTCTGGA TTT TCC-GAGGGCG TATTTGTTTCTATAT yhfM 3341905 - 3343293 + | putative fructoselysine transporter TERM 4243 3343932 - 3343905 - g 86 -6.3 -5.06816 | gap 1, opp_overlap 3343923 ACCTGGGAAGAAAAA GGCC-GCCAGCT TGGTG AACTGGCCAGCC AGTGGCCGATGATTT frlB 3343293 - 3344336 + | fructoselysine-6-P-deglycase TERM 4244 3344344 - 3344365 + F 90 -12.9 -3.53343 | opp_overlap 3344338, overlap 3344345 AATATTAATCCCTCG CCCGGCCCG GCAA CGGGCCGGA TTTACGCAAGGAGTT TERM 4245 3344345 - 3344364 + F 95 -16.4 -2.71791 | opp_overlap 3344338, overlap 3344344 ATATTAATCCCTCGC CCGGCCCG GCAA CGGGCCGG ATTTACGCAAGGAGT TERM 4246 3344408 - 3344393 - g 76 -7.6 -4.26903 | GTTACCCGATGAAAA CAGGTA TGTT TACCTG CGGCCACCAGCGGCT yhfP 3344386 - 3345216 + | fructoselysine 3-epimerase yhfQ 3345213 - 3345998 + | fructoselysine 6-kinase TERM 4247 3346000 - 3346037 + F 73 -9.9 -3.33696 | opp_overlap 3346005, overlap 3346002 3346005 ACGGTGCCTGGTAGG TATAACGTTGGCGTGAG CATC TTCACGCCAACGTGCTG TTACTTGCCGGAAAA TERM 4248 3346002 - 3346035 + F 74 -10.3 -3.23853 | opp_overlap 3346005, overlap 3346000 3346005 GGTGCCTGGTAGGTA TAACGTTGGCGTGAG CATC TTCACGCCAACGTGC TGTTACTTGCCGGAA TERM 4249 3346005 - 3346032 + F 100 -16.4 -2.80699 | opp_overlap 3346005, overlap 3346002 3346000 GCCTGGTAGGTATAA CGTTGGCGTGAG CATC TTCACGCCAACG TGCTGTTACTTGCCG TERM 4250 3346032 - 3346005 - f 100 -15.7 -3.35679 | opp_overlap 3346002 3346000 3346005 GCCTGGTAGGTATAA CGTTGGCGTGA GCATCT TCACGCCAACG TGCTGTTACTTGCCG yhfR 3346032 - 3346829 + | DNA-binding transcriptional regulator FrlR TERM 4251 3346842 - 3346884 + T 100 -14.9 -4.1899 | opp_overlap 3346826 3346831 3346830 3346845 3346847 3346848, overlap 3346847 TAACCGTAGGCCGGA TAAGATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTTGAA TTTTACATCCCGTAC TERM 4252 3346881 - 3346845 - T 100 -16.6 -3.30124 | opp_overlap 3346842 3346847, overlap 3346831 3346830 3346847 3346848 CCGTAGGCCGGATAA GATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTT GAATTTTACATCCCG TERM 4253 3346879 - 3346847 - T 100 -19.2 -3.21924 | opp_overlap 3346842 3346847, overlap 3346831 3346830 3346845 3346848 GTAGGCCGGATAAGA TGCGCCAGCATCGC ATCCG GCGATGCTGGCGCG TTGAATTTTACATCC TERM 4254 3346847 - 3346879 + T 100 -21.4 -3.38281 | opp_overlap 3346831 3346830 3346847 3346845 3346848, overlap 3346842 GTAGGCCGGATAAGA TGCGCCAGCATCGC ATCCG GCGATGCTGGCGCG TTGAATTTTACATCC TERM 4255 3346878 - 3346848 - T 100 -22.7 -2.5294 | opp_overlap 3346847 3346842, overlap 3346831 3346830 3346847 3346845 TAGGCCGGATAAGAT GCGCCAGCATCGC ATCCG GCGATGCTGGCGC GTTGAATTTTACATC yhfS 3348066 - 3346981 - | hypothetical protein yhfU 3349786 - 3349394 - | hypothetical protein yhfV 3350636 - 3349758 - | putative hydrolase yhfW 3351859 - 3350633 - | putative mutase yhfX 3353022 - 3351859 - | hypothetical protein TERM 4256 3352987 - 3353001 + g 76 -9.2 -3.72984 | opp_overlap 3352986, overlap 3352999 TGCGGCGGAAATCAG CGCCGG GTT CTGGCG TTTCAATGCTTCTAC TERM 4257 3353046 - 3353060 + r 82 -2.9 -5.54264 | opp_overlap 3353055, overlap 3353050 3353055 CTCGTTTCTGTTCCT TGAAT TAAAT ATTCA TTTTTTTGAATATTT yhfY 3353510 - 3353106 - | hypothetical protein yhfZ 3354171 - 3353485 - | hypothetical protein TERM 4258 3354341 - 3354366 + r 75 -3.1 -5.14965 | overlap 3354344 3354345 CCCAACAAATAACGG GCCAGCGTCGT GATG ACGACGCCTTC TTTTTTGATAAACGT TERM 4259 3354344 - 3354363 + r 82 -7.8 -4.67552 | overlap 3354341 3354345 AACAAATAACGGGCC AGCGTCGT GATG ACGACGCC TTCTTTTTTGATAAA TERM 4260 3354345 - 3354362 + r 79 -11.3 -3.39447 | overlap 3354344 3354341 ACAAATAACGGGCCA GCGTCGT GATG ACGACGC CTTCTTTTTTGATAA TERM 4261 3354516 - 3354529 + r 75 -9.5 -3.58343 | opp_overlap 3354516 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTCAGAGTGATGAC TERM 4262 3354529 - 3354516 - R 100 -9.5 -5.67967 | opp_overlap 3354516 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTCAGAGTGATGAC trpS 3355663 - 3354659 - | tryptophanyl-tRNA synthetase TERM 4263 3354755 - 3354802 + g 95 -15.9 -3.06183 | gap 1, overlap 3354737 3354764 GTCTTTCATCACCTG TTGCAGGAAGGCT-TCATCGTT GCGGA AACGGTGATAGCGTTCCTGCAA TTCAGTCAGCATACC gph 3356414 - 3355656 - | phosphoglycolate phosphatase rpe 3357084 - 3356407 - | ribulose-phosphate 3-epimerase TERM 4264 3357089 - 3357101 + r 78 -6.3 -4.61482 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTTTCGCGGG dam 3357938 - 3357102 - | DNA adenine methylase TERM 4265 3357498 - 3357518 + g 79 -2.5 -5.24129 | AGCGAAGTGATACAA CTCTGCTTC CGG GAAATAGGG TTTTTTGTAGCGGCC TERM 4266 3357629 - 3357609 - G 82 -3.1 -5.19879 | overlap 3357611 3357614 GTTCAAATATAAAAA CAGTACCGC CCG ACGGAACGG ATCCTGGCTTTTGTT TERM 4267 3357822 - 3357801 - G 100 -13.1 -4.60073 | overlap 3357816 GATATAACGAGAAAA GTCGGTGTT GAGA AACACCGAC CCGGCACCTACAAAA damX 3359331 - 3358045 - | hypothetical protein TERM 4268 3359407 - 3359389 - R 77 -11 -3.15621 | opp_overlap 3359386, overlap 3359387 AACCTGAAGCTAATA GACCGCTT GAT AAGCGGCC TGACCTTTCTTGTTG aroB 3360511 - 3359423 - | 3-dehydroquinate synthase aroK 3361089 - 3360568 - | shikimate kinase I TERM 4269 3360877 - 3360895 + g 72 -4.5 -4.64676 | AATACCCTGTTTCTC GGTCAAC TCATT GATGACC TTTTCTTCGCGATCG TERM 4270 3361153 - 3361127 - R 83 -10 -4.05446 | TTCGTTAATGATAAA CCCGCTTCGCTC AGA GAGCGCCGCAGG ACATGAACTGAAACC TERM 4271 3361348 - 3361332 - R 83 -6.5 -5.06451 | GATTAGCGTAAAAAA GACAGCA AAA TGCCGCC TGAATGATAAATCAT hofQ 3362728 - 3361490 - | outer membrane porin HofQ TERM 4272 3361656 - 3361642 - GR 75 -5.6 -4.59773 | TTTTACGGGTAAAAA TGCCGC CCA GCGCCA ACGTTTCTCCGCTTT TERM 4273 3362231 - 3362278 + gr 72 -7.8 -3.87075 | gap 1 TACCCACTGTTCAAG CGCGCTTAACGCCGTTTTGTTAT CTC GTAGCAAAA-GGCGATTGGTGCG TTTATCGACGGTCAT yrfA 3363083 - 3362640 - | hypothetical protein yrfB 3363474 - 3363034 - | hypothetical protein TERM 4274 3363235 - 3363213 - GR 72 -8.4 -3.74872 | overlap 3363214 ATGGATGCCAGGAAA CCAGTTGCGC GCC GGGCAACTGA AAATCCAGTGGCGAA yrfC 3363997 - 3363458 - | hypothetical protein yrfD 3364803 - 3363997 - | hypothetical protein TERM 4275 3364796 - 3364812 + g 78 -12.3 -2.92091 | ATGATCTCCTTATCA CCCGTCA CTC TGACGGG TATATCAATGCGTCT mrcA 3364872 - 3367448 + | peptidoglycan synthetase TERM 4276 3367469 - 3367456 - T 93 -9.5 -4.72272 | opp_overlap 3367456 3367465 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA TERM 4277 3367456 - 3367469 + T 87 -9.5 -4.28774 | opp_overlap 3367456, overlap 3367465 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA nudE 3368173 - 3367613 - | ADP-ribose diphosphatase NudE yrfF 3368493 - 3370628 + | putative dehydrogenase TERM 4278 3370670 - 3370629 - f 100 -13.9 -3.67775 | gap 1, opp_overlap 3370633, overlap 3370632 AGCCTTATCGAATAA CACGTTTGCGCGACAGGTTA TGC TACCCTGTCGCGCAAAT-TG CTTCACTCTGGAGAT TERM 4279 3370668 - 3370632 - f 95 -16.7 -2.64872 | opp_overlap 3370633, overlap 3370629 CTTATCGAATAACAC GTTTGCGCGACAGGTTA TGC TACCCTGTCGCGCAAAT TGCTTCACTCTGGAG TERM 4280 3370633 - 3370667 + F 100 -20.2 -3.39142 | opp_overlap 3370632 3370629 TTATCGAATAACACG TTTGCGCGACAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA yrfG 3370648 - 3371361 + | putative phosphatase TERM 4281 3371417 - 3371427 + G 75 -4.6 -4.82901 | CTGGATAAATGGCTA TGGG CTG CCCG TTTTTATAAAACCCG yrfH 3371372 - 3371773 + | ribosome-associated heat shock protein Hsp15 TERM 4282 3372125 - 3372100 - g 93 -10.4 -4.44974 | opp_overlap 3372099 CGAAATTCCAGAAAA TGCCGACCTG AAAACG CTGGTCGGCA ATGGTTACGTGGTGA hslO 3371798 - 3372676 + | Hsp33-like chaperonin TERM 4283 3372685 - 3372708 + T 100 -16.8 -4.15106 | opp_overlap 3372680 3372696 TCATTAATGAGTATG TCCGGCAGAG AGGG CTCTGCCGGA TTTTACAACTTAATG yhgE 3374535 - 3372811 - | putative transport TERM 4284 3373069 - 3373080 + g 77 -5.8 -4.66163 | ATCTTGCTCGACCAG GACG CAGG CGTC TTTTTCAATACAGGT TERM 4285 3375247 - 3375233 - g 73 -11.4 -2.77043 | opp_overlap 3375231, overlap 3375232 GGCAGCATCTGAAAG GCCTGG TGA CCAGGC AGCTTTCCGGCAAAC TERM 4286 3376507 - 3376488 - g 73 -11.4 -2.59797 | overlap 3376487 3376485 CTTCGATAAATACAC CGACACCC CTGC GGGTGCCG CGCTGGTAGCGGCTG pckA 3374914 - 3376536 + | phosphoenolpyruvate carboxykinase TERM 4287 3376606 - 3376585 - T 100 -13.7 -4.65153 | opp_overlap 3376585 TTATAGAAAGCAAAA CGGGAGGCA CCTT CGCCTCCCG TTTATTTACCCTTCT TERM 4288 3376585 - 3376606 + T 100 -13 -4.46835 | opp_overlap 3376585 TTATAGAAAGCAAAA CGGGAGGC ACCTTC GCCTCCCG TTTATTTACCCTTCT envZ 3377964 - 3376612 - | osmolarity sensor protein TERM 4289 3377909 - 3377877 - G 73 -12 -2.73443 | overlap 3377876 GCACCACCAGATAAG TCGTCACCAGGCTG GCGAA CAGCAAGGTGACGA TGAGCAATAACGTAC ompR 3378680 - 3377961 - | osmolarity response regulator TERM 4290 3378200 - 3378186 - G 77 -10 -3.62096 | opp_overlap 3378192 3378197, overlap 3378190 CTTCAGTACCGCAAA CTCACC GCT GGTGAG CGGCATCGGCTCATC greB 3378908 - 3379384 + | transcription elongation factor GreB TERM 4291 3381374 - 3381353 - g 84 -7.9 -4.62904 | gap 1, opp_overlap 3381352 3381351, overlap 3381354 AAAGAGCTGGAAAAA CCGGGTCGCG ATC CGCGTCC-GG AATTTAAAACCGCTC yhgF 3379580 - 3381802 + | hypothetical protein TERM 4292 3381903 - 3381882 - T 95 -10.9 -4.52589 | gap 1, opp_overlap 3381883 3381884, overlap 3381883 3381884 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGC-C TTTTTATTCCACAAC TERM 4293 3381883 - 3381903 + T 100 -11.1 -5.06414 | opp_overlap 3381882 3381883 3381884, overlap 3381884 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAC TERM 4294 3381903 - 3381883 - T 79 -11.1 -3.31232 | opp_overlap 3381883 3381884, overlap 3381882 3381884 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAC TERM 4295 3381884 - 3381902 + T 95 -14.6 -3.63367 | opp_overlap 3381882 3381883 3381884, overlap 3381883 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA TERM 4296 3381902 - 3381884 - T 86 -14.6 -2.58418 | opp_overlap 3381884 3381883, overlap 3381882 3381883 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA SBO_3395 3382077 - 3381907 - | putative IS1 encoded protein insB 3382170 - 3382673 + | IS1 ORF2 feoA 3383016 - 3383243 + | ferrous iron transport protein A TERM 4297 3384107 - 3384118 + G 74 -5.8 -4.53036 | TGCTCAACCGTTTCC TCGG TCTG CCGA TTTTCCTCTTTGTGA TERM 4298 3384890 - 3384872 - g 77 -8.2 -4.11216 | overlap 3384885 CGCTGAGCGGGAAAA TCGTCGAT AAC ATCAACGA CTCGGCGCTGGCGTC feoB 3383260 - 3385581 + | ferrous iron transport protein B yhgG 3385581 - 3385817 + | hypothetical protein TERM 4299 3385844 - 3385868 + F 100 -12.2 -5.08824 | gap 1, opp_overlap 3385844 CGCCTGTTTTGGAAA GCCCGGTATGC GTCT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4300 3385868 - 3385844 - f 88 -12.2 -3.53012 | gap 1, opp_overlap 3385844 CGCCTGTTTTGGAAA GCCCGGTATGC GTCT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4301 3385908 - 3385896 - f 80 -6.3 -4.82901 | opp_overlap 3385903 GGCTTTCCATAAAAA TGCAA CTC TTGCA GCACGGCGTAAGTTC TERM 4302 3386047 - 3386031 - g 71 -2.9 -4.77036 | overlap 3386034 CGCCATGAGCAAAAA GCAGAGT TCC ACCCCAC ACGATGCGCTGTTCA TERM 4303 3386084 - 3386096 + G 71 -3.3 -4.75309 | overlap 3386085 TTTTACGCCAACCGG ACACG GCT CGTGA TTTTCTTGCGTTTCA yhgA 3386020 - 3386898 + | hypothetical protein TERM 4304 3386886 - 3386912 + T 71 -10.8 -2.74322 | overlap 3386878 3386885 AGAAGAGTTGGCTGC GGCGAGCCAGTA AAT TTCTGTCTCGCC ATTTCAAAAGTTGCC bioH 3387697 - 3386927 - | carboxylesterase BioH TERM 4305 3387000 - 3386987 - G 70 -5.2 -4.44046 | opp_overlap 3386987 CGGATGCGAAATAAA CGGC GCATGG GCCG CTTTGGCGAAGATAT yhgH 3387735 - 3388418 + | gluconate periplasmic binding protein yhgI 3388477 - 3389052 + | putative DNA uptake protein gntT 3389413 - 3390729 + | high-affinity transport of gluconate/gluconate permease TERM 4306 3390768 - 3390733 - T 73 -9.8 -3.32963 | gap 1, overlap 3390735 3390736 ATGGTGATTTGATAA CACTGACTGCCGGATGC ATC GCATCCGGCA-TCAACC GCACTCTACTGCTTC TERM 4307 3390766 - 3390735 - T 90 -14.6 -3.23393 | gap 1, overlap 3390733 3390736 GGTGATTTGATAACA CTGACTGCCGGATGC ATC GCATCCGGCA-TCAA CCGCACTCTACTGCT TERM 4308 3390765 - 3390736 - T 90 -15.9 -2.53822 | gap 1, overlap 3390735 3390733 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGGCA-TCA ACCGCACTCTACTGC malQ 3392858 - 3390774 - | 4-alpha-glucanotransferase TERM 4309 3390873 - 3390885 + g 74 -3.3 -4.93296 | opp_overlap 3390852 3390873 AAGCGTTGCGGAAAG CTTGC GTC GCCAG TTTTTATACTGGTAA TERM 4310 3391811 - 3391797 - G 74 -10 -3.56092 | overlap 3391798 CCAGCAGGCGGCAAA CTGGCT GTA AGCCAG CCACTGCAACCAGAG TERM 4311 3392703 - 3392729 + g 85 -13.1 -3.18582 | gap 1, overlap 3392700 3392699 3392720 3392721 GACATTCGGGACTGG CGTTACCGCCAC TTTC GTGGCGGTA-CG TTGATGCATCGCGTC malP 3395261 - 3392868 - | maltodextrin phosphorylase TERM 4312 3393778 - 3393794 + g 70 -3.7 -4.62872 | TATTGCTGACGGAAT TTCGC ATCATCA GCGAA TTTTTCCAGATTGAT TERM 4313 3393867 - 3393884 + g 79 -9.9 -3.72576 | ATCCAACAGAGCCGC CAGTGCA GGGT TGCACTG TTTGATCCAGCGACG TERM 4314 3394445 - 3394461 + g 72 -5.1 -4.57073 | opp_overlap 3394443, overlap 3394443 CACACTGGAAGTACT GCTGC ATCAAGC GCAGC TTTTTACCGGCAGTA TERM 4315 3395684 - 3395701 + H 72 -6.3 -4.21676 | gap 1, overlap 3395684 3395686 AGGGAAACCAGTATT C-ACGCTG GAT CAGCGTCG TTTTAGGTGAGTTGT TERM 4316 3396182 - 3396170 - g 72 -5.5 -4.58663 | overlap 3396171 ACGATGGCGCAAAAA CGGCA ATA TGCCA GCCTGACGTCACTCT malT 3395873 - 3398578 + | transcriptional regulator MalT yhgKJ 3399640 - 3398621 - | RNA 3'-terminal-phosphate cyclase rtcB 3400867 - 3399641 - | hypothetical protein TERM 4317 3400536 - 3400554 + g 77 -10.2 -3.65902 | opp_overlap 3400524 CAACGCCCGGTAGTA CGCCCGTG CGG CACGGCCG TTTCAATCGCCTGAC TERM 4318 3400770 - 3400757 - G 77 -5.9 -4.65263 | opp_overlap 3400755 3400757 ATGTTTGAAAATAAA CGGCA TCTT CGCCG TATTAATAAGTTGCT rtcR 3401056 - 3402654 + | putative 2-component regulator glpR 3403394 - 3402636 - | DNA-binding transcriptional repressor GlpR TERM 4319 3403125 - 3403158 + g 70 -6.1 -4.17914 | gap 2 CAGTGTCGAGCCGTT GGGGATTTGCTCCGC CACTTT GCGG-GCAA-TCCTC TCTTTTTCTTCGGTC glpG 3404241 - 3403411 - | intramembrane serine protease GlpG TERM 4320 3404095 - 3404054 - G 74 -10.1 -3.48276 | opp_overlap 3404043 3404054, overlap 3404055 3404081 CTGGCCGCCAGATAA CGCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGCC CGCACGCGCTCGGCC TERM 4321 3404094 - 3404055 - G 84 -13.6 -2.68823 | opp_overlap 3404043 3404054, overlap 3404054 3404081 TGGCCGCCAGATAAC GCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGC CCGCACGCGCTCGGC TERM 4322 3404101 - 3404081 - G 75 -6.7 -4.36914 | overlap 3404055 3404054 GGGTTTTCGAGAAAA CGCGCCAGC TCC GCCCGCACG CGCTCGGCCTGGGAC TERM 4323 3404215 - 3404197 - G 72 -5.8 -4.33621 | overlap 3404193 3404199 CATGTAATCAACAAA CGCCTGCG CCA CGCGGGGG TTAGCAAAAGAGGTA glpE 3404612 - 3404286 - | thiosulfate sulfurtransferase TERM 4324 3404752 - 3404767 + H 71 -7.6 -3.95219 | opp_overlap 3404752 GATTCTTTGCTAATA TGTTCG ATAA CGAACA TTTATGAGCTTTAAC TERM 4325 3405718 - 3405708 - g 81 -4.6 -5.0538 | GCGCACTTTAAAAAA CAGC TTA GCCG TGACGATATCGTCTG glpD 3404802 - 3406307 + | glycerol-3-phosphate dehydrogenase TERM 4326 3406314 - 3406339 + T 79 -9.8 -3.81027 | gap 1, opp_overlap 3406311, overlap 3406315 GCGTCGTAAGGATGA T-GCCCGGTTG AAGTG CAACCGGGCTA TTTGGATTCCTTAGA TERM 4327 3406315 - 3406337 + T 95 -14.9 -3.48598 | opp_overlap 3406311, overlap 3406314 CGTCGTAAGGATGAT GCCCGGTTG AAGTG CAACCGGGC TATTTGGATTCCTTA TERM 4328 3406677 - 3406695 + T 79 -4.4 -5.26875 | opp_overlap 3406677 GACCGGCGAAAAGAC CAGCCAGC AAT GCAGTCTG TTTTTTAATTCAGGA insB 3407285 - 3406773 - | IS1 ORF2 SBO_3416 3407350 - 3407532 + | putative IS1 encoded protein SBO_3417 3407740 - 3407498 - | hypothetical protein SBO_3418 3408510 - 3407743 - | hypothetical protein SBO_3419 3409223 - 3408513 - | hypothetical protein TERM 4329 3408643 - 3408609 - G 70 -5.6 -4.35926 | opp_overlap 3408609, overlap 3408602 ACGCGAAAGGGAAAA GCTGGGGCGAATGCAA CTA TTGCAGTCTCGACAGC TTTCCTCTGCGCAAT SBO_3420 3409613 - 3409239 - | hypothetical protein SBO_3421 3410744 - 3409647 - | hypothetical protein TERM 4330 3410854 - 3410883 + r 89 -9.3 -4.59109 | overlap 3410846 3410856 GGACCCTTTGGCCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4331 3410856 - 3410881 + r 100 -16.3 -3.90762 | overlap 3410846 3410854 ACCCTTTGGCCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_3422 3411980 - 3411093 - | IS629 ORF2 TERM 4332 3411660 - 3411672 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_3423 3412255 - 3411980 - | IS629 ORF1 SBO_3424 3413188 - 3412358 - | IS4 orf SBO_3425 3413525 - 3413202 - | IS4 orf TERM 4333 3413540 - 3413515 - G 100 -9.8 -5.61596 | opp_overlap 3413515 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4334 3413515 - 3413540 + g 73 -9.1 -3.61398 | opp_overlap 3413515 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC glgP 3416072 - 3413625 - | glycogen phosphorylase TERM 4335 3413864 - 3413843 - G 72 -10.1 -3.38316 | opp_overlap 3413842 TGATCAGCGAATCAA CCAGATCGC GATA GCGACCCGG ATCTTCCGGACTGAA TERM 4336 3415690 - 3415722 + g 88 -8.9 -4.72497 | overlap 3415691 3415693 AAGCAAGCCGCCAGA CGTCCCAGGCCACCG TTA CCGAGGCCTGGGTCA TTTTCTTCATCAATC TERM 4337 3415691 - 3415721 + g 86 -12.4 -3.42775 | overlap 3415690 3415693 AGCAAGCCGCCAGAC GTCCCAGGCCACCG TTA CCGAGGCCTGGGTC ATTTTCTTCATCAAT TERM 4338 3415693 - 3415719 + g 95 -13.6 -3.27725 | overlap 3415691 3415690 CAAGCCGCCAGACGT CCCAGGCCACCG TTA CCGAGGCCTGGG TCATTTTCTTCATCA glgA 3417524 - 3416091 - | glycogen synthase TERM 4339 3416758 - 3416770 + g 82 -7.7 -4.46212 | opp_overlap 3416751 AACAGTAAGTCCGTC TCTGG ACT CCAGA TTTTCTCGTCCACGC glgC 3418819 - 3417524 - | glucose-1-phosphate adenylyltransferase TERM 4340 3418328 - 3418342 + g 84 -7.8 -4.60487 | opp_overlap 3418327 3418328 TGGCATACAAGCAAC GGTGCA ACG TGCGCC TTTTTCGACGTGATC glgX 3420810 - 3418837 - | glycogen debranching enzyme TERM 4341 3420443 - 3420414 - G 70 -10 -3.2056 | opp_overlap 3420430 AGTCATAGTGATCAA CCACCACTACGC ATTTCG GCGCAATGGCGG CGTTGTCGCGATAGT glgB 3422993 - 3420807 - | glycogen branching enzyme TERM 4342 3421384 - 3421394 + g 83 -5.4 -5.0538 | TCGCCCGGCATGCGG TCGA GAA TCGA TTTTTTACCGTGGAC TERM 4343 3423247 - 3423230 - R 71 -9.8 -3.15996 | opp_overlap 3423228 3423227, overlap 3423228 TATTACGCACTAACA GGGGCG GCATCG CGCCCC AGATTTAATGAATAA asd 3424369 - 3423266 - | aspartate-semialdehyde dehydrogenase yhgN 3424561 - 3425154 + | dITP- and XTP- hydrolyzing protein TERM 4344 3425201 - 3425178 - T 87 -10.3 -4.17048 | GTTTTTCGAAAAGAA CCCGGTAGC GTCACA ACTACCGGG CGAACAAACTTAACT gntU 3426551 - 3425211 - | low affinity gluconate transporter TERM 4345 3426526 - 3426498 - G 73 -3.9 -4.77036 | overlap 3426500 3426501 CTTCATGACTAAAAA CAGCAGCAG TAAAACAGACC CTACTGCTG TTAAAACAAGCGTTA gntK 3427082 - 3426555 - | gluconate kinase 1 TERM 4346 3427140 - 3427114 - R 78 -5.2 -5.01845 | opp_overlap 3427114 TACAAGAATTAAAAA TGTTACGGGTAA CTG TTATCGGTAACA TTGTCCAGCCGGACA gntR 3428216 - 3427221 - | regulator of gluconate operon TERM 4347 3427945 - 3427957 + g 76 -9.1 -3.75629 | opp_overlap 3427940 GTCTGATAACCGTGC GCGTC GGT GACGC TTTCGATTCCGCGTA TERM 4348 3428390 - 3428359 - R 100 -13.6 -4.10429 | overlap 3428349 AACGACGCGGCAAAA CCCCGGAAGCGTGC ATCA GCACGCGACCGGAG CGAGCGAGGAAGCCT yhhW 3429135 - 3428440 - | hypothetical protein yhhX 3430295 - 3429258 - | putative dehydrogenase TERM 4349 3430436 - 3430420 - H 100 -9.4 -5.9663 | AAAGATCAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAATACTGGAA yhhY 3430627 - 3431115 + | putative acetyltransferase YhhY TERM 4350 3431166 - 3431182 + F 70 -5.2 -4.42062 | opp_overlap 3431168 CATTCAAAATCGACA TACCTT CCTTT AAGGTA TTTATTTACCCAATA yhhZ 3431352 - 3432551 + | hypothetical protein SBO_3440 3432656 - 3433675 + | putative transposase insB 3434200 - 3433697 - | IS1 ORF2 SBO_3442 3434275 - 3434553 + | putative IS1 encoded protein TERM 4351 3435186 - 3435161 - T 87 -9.7 -4.36914 | overlap 3435163 CTTGCCCTGACAAAA TAGCCCTCTTC CCAC GAAGAGGGCCG CTAACCTTAGTACCC TERM 4352 3435184 - 3435163 - T 100 -14.5 -3.79419 | overlap 3435161 TGCCCTGACAAAATA GCCCTCTTC CCAC GAAGAGGGC CGCTAACCTTAGTAC ggt 3436926 - 3435193 - | gamma-glutamyltranspeptidase periplasmic precursor TERM 4353 3436900 - 3436917 + g 90 -9.1 -4.51699 | opp_overlap 3436884 AGCAGCAATGGCTAC CCGGCGT AAAA ACGTCGG TTTTATCATCGTTAT TERM 4354 3437068 - 3437081 + G 72 -8.1 -3.95219 | overlap 3437078 GACTTCTGATTCTTA CGGCA CTCC TGCCG TTTGTCGGCTTTGCA TERM 4355 3437453 - 3437420 - g 81 -9.5 -4.0162 | GCCGGAGAGGAGAAA CGGCGACATGCTGAA TCAG CCCAGCACGCCGCAG CCTGACATTCCGTTG yhhA 3437046 - 3437486 + | hypothetical protein ugpQ 3438216 - 3437473 - | cytoplasmic glycerophosphodiester phosphodiesterase TERM 4356 3437534 - 3437565 + g 95 -12.2 -4.17556 | gap 1, opp_overlap 3437532 3437528 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GCCGC-GCGCTGGGG TTTATTGACGGTATA ugpC 3439283 - 3438213 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 4357 3439589 - 3439573 - R 73 -8 -4.17762 | GATGTCGCAAAAGAA GCGCAT TGGCG ATGCGC CGTCGATCCGCGCCG TERM 4358 3440958 - 3440971 + r 70 -5.2 -4.46212 | opp_overlap 3440956 3440968, overlap 3440957 TTGTTGTACCGAATG CGCG AATTCA CGCG TTTTATGCTCGCGGG TERM 4359 3441308 - 3441293 - R 72 -9 -3.53811 | opp_overlap 3441285 3441287 3441293 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG TERM 4360 3441293 - 3441308 + r 70 -9 -3.35996 | opp_overlap 3441293, overlap 3441285 3441287 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG livF 3442040 - 3441327 - | leucine/isoleucine/valine transporter ATP-binding subunit livG 3442809 - 3442042 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 3444083 - 3442806 - | leucine/isoleucine/valine transporter permease subunit livH 3445006 - 3444080 - | branched-chain amino acid transporter permease subunit LivH TERM 4361 3444887 - 3444871 - G 83 -10.1 -4.1347 | opp_overlap 3444871 TGCCAATCATATAAA CCTCGCC GTG GGCGAAG TTGATCATGCCGATA TERM 4362 3445046 - 3445024 - R 82 -11.2 -3.55622 | overlap 3445025 GGTAACCTTTCTAAA CCCGCCCGCA TTT TACGGGCGGT GGGATGATCACTTGG TERM 4363 3445045 - 3445025 - R 86 -14.7 -2.73159 | overlap 3445024 GTAACCTTTCTAAAC CCGCCCGCA TTT TACGGGCGG TGGGATGATCACTTG livK 3446163 - 3445054 - | high-affinity leucine-specific transport system periplasmic binding protein insB 3446901 - 3446398 - | IS1 ORF2 SBO_3455 3446994 - 3447164 + | putative IS1 encoded protein TERM 4364 3447307 - 3447297 - f 95 -3.2 -5.88476 | AAAAGAAATAAAAAA GAGA AAG CCTC CGATTAAATTATTTC yhhK 3447363 - 3447746 + | hypothetical protein TERM 4365 3447918 - 3447936 + T 70 -10.3 -2.5785 | opp_overlap 3447909 3447913, overlap 3447917 ATATTAGCAATTTGG CGGCAAC CCAAA GTTGCCG ATTAATGATTACTTC livJ 3449105 - 3447945 - | high-affinity amino acid transport system periplasmic binding protein TERM 4366 3448776 - 3448787 + g 70 -5.8 -4.15044 | CACATATTTAATGCC GTCG TTAA CGAC TTTGTTCGCCACCGC TERM 4367 3449297 - 3449278 - R 100 -7.8 -5.75538 | opp_overlap 3449278 CCCAAAAAACAAAAA CCCCGGAC TCTC ATCCAGGG TTCTCTGCTTAATAG rpoH 3450173 - 3449319 - | RNA polymerase factor sigma-32 TERM 4368 3450409 - 3450360 - R 79 -10.1 -3.68292 | gap 1, opp_overlap 3450360, overlap 3450346 3450361 ACCGGGAAGAGACAA CGGGAT-CTCTTTCCCTGCTACGG AAC CCATTGCAGGGAAAGAGTATAACA CGCTTTTATTATTCA TERM 4369 3450408 - 3450361 - R 74 -11.4 -2.80493 | gap 1, opp_overlap 3450360, overlap 3450346 3450360 CCGGGAAGAGACAAC GGGAT-CTCTTTCCCTGCTACGG AAC CCATTGCAGGGAAAGAGTATAAC ACGCTTTTATTATTC ftsX 3451476 - 3450418 - | cell division protein FtsX TERM 4370 3450552 - 3450542 - G 70 -5.4 -4.3586 | CCATTGATATCAAAA TTCG TTC CGAA AACCTGTGCCACTTC TERM 4371 3451102 - 3451124 + g 77 -3.3 -5.03314 | gap 1 CTGTGCCACCACGCC CGCAGCGGCG TCAT CGTC-CAGCG TTTTTTGCAAGTAAA ftsE 3452137 - 3451469 - | cell division protein FtsE ftsY 3453633 - 3452140 - | cell division protein FtsY TERM 4372 3453805 - 3453792 - g 87 -4.5 -5.1861 | TTTATCATGAAAAAA CCGAA TCAT TCCGG CAGCGGCCAAATCCG yhhF 3453783 - 3454379 + | 16S rRNA m(2)G966-methyltransferase TERM 4373 3454560 - 3454591 + G 80 -11.7 -3.39018 | opp_overlap 3454556, overlap 3454557 CCCGCAGATGACCAC CGCCGAAAAGG TGCGGATTTT CCTTTTCGGCG TGTTTGAACTGCTGG yhhL 3454369 - 3454638 + | hypothetical protein TERM 4374 3454662 - 3454636 - T 75 -3.1 -5.22039 | overlap 3454623 TTTAAAGTTAAAAAA TAACCTTATTG TTCGC CAACAAAGCTA ACAAAGCGCGTTCCT yhhM 3455000 - 3454641 - | putative receptor TERM 4375 3455372 - 3455386 + G 71 -3.4 -4.8048 | overlap 3455373 3455374 CGTCAACGTCTGATG TACGCC ATC GGCGCG TTTTTCCTCTCGCAC yhhN 3455141 - 3455767 + | putative enzyme TERM 4376 3455778 - 3455797 + F 80 -12.2 -3.01984 | opp_overlap 3455774 3455773 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA TERM 4377 3456574 - 3456553 - g 83 -10.1 -4.13654 | CGCTGAAACCAGAAA CCGCCACGC GCCT GCGTAACGG TGAGCGGGAAGAGGT zntA 3455841 - 3458039 + | zinc/cadmium/mercury/lead-transporting ATPase TERM 4378 3458071 - 3458046 - T 74 -8.3 -3.83724 | AGGAGATAAGGCAAA CCGATCGCA ACATTGAG CGCGATCGG TCCCCTCGCCCCTCT yhhP 3458386 - 3458141 - | cell developmental protein SirA TERM 4379 3458241 - 3458225 - G 70 -4.3 -4.52803 | CATAAAGGTACAAAA CCCAGGA ATA TCGCGGG TAGTGGCCGGATCGT TERM 4380 3459059 - 3459077 + G 95 -6.6 -5.1963 | overlap 3459060 CACACTGTTCGGTAA CGTCAGCG ACA CGCTGGCC TTTTTCTTCATTGCC TERM 4381 3459060 - 3459076 + G 77 -10.1 -3.70694 | overlap 3459059 ACACTGTTCGGTAAC GTCAGCG ACA CGCTGGC CTTTTTCTTCATTGC yhhQ 3458607 - 3459272 + | hypothetical protein SBO_3469 3459345 - 3459902 + | hypothetical protein TERM 4382 3459920 - 3459947 + T 100 -13.4 -5.52384 | opp_overlap 3459915 TTTAAGATGATGAGG CGGCCTCAGGGA CGTG TTCCGGAGGCCG TTTTTTTAATCGCCA yhhS 3461123 - 3459906 - | hypothetical protein TERM 4383 3461667 - 3461651 - g 75 -5.1 -4.60041 | ATGGACTCGGAAAAA GTGGTTA CCT TCACCAC AGCGCTAATGATCGG yhhT 3461174 - 3462091 + | hypothetical protein TERM 4384 3462571 - 3462539 - g 82 -11.3 -3.53224 | opp_overlap 3462529 3462566, overlap 3462560 CATTCGCGCCGGAAA CGCCGCTATGGTTCA ACT TAAGCCATAGCGGTG ACGATATCGCTCTGC yhhU 3462346 - 3462933 + | holo-(acyl carrier protein) synthase 2 nikA 3463044 - 3464618 + | periplasmic binding protein for nickel TERM 4385 3464664 - 3464684 + G 90 -7.5 -4.93296 | overlap 3464667 TGCTGATCCCGATGG TGCTCGCCG CCT CGGTGATCA TTTTTCTGATGCTGC nikB 3464618 - 3465562 + | nickel transporter permease NikB nikC 3465559 - 3466392 + | nickel transporter permease NikC nikD 3466392 - 3467156 + | nickel transporter ATP-binding protein nikE 3467153 - 3467959 + | nickel transporter ATP-binding protein TERM 4386 3468175 - 3468157 - g 79 -4.5 -4.89233 | opp_overlap 3468158, overlap 3468148 3468158 TATGAACACGAAAAA CGCGACT TAGCC AGCCGCA TTGTCTCCACCCAGC yhhG 3467965 - 3468366 + | nickel responsive regulator TERM 4387 3468436 - 3468393 - T 76 -4.2 -4.96388 | gap 1, opp_overlap 3468401 3468406, overlap 3468395 3468401 AACGAGGAAAGAAAA GATATTAACTGAACTTAATTT ATA AAATTAAGTTCAGTTG-CATA GATAGATCCTGTAAA TERM 4388 3468436 - 3468395 - T 83 -9.9 -4.08958 | gap 1, opp_overlap 3468401 3468406, overlap 3468393 3468401 CGAGGAAAGAAAAGA TAT-TAACTGAACTTAATTT ATA AAATTAAGTTCAGTTGCATA GATAGATCCTGTAAA TERM 4389 3468401 - 3468429 + T 88 -14.9 -3.08133 | opp_overlap 3468393 3468395 3468401, overlap 3468406 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC TERM 4390 3468429 - 3468401 - T 95 -14.9 -3.48814 | opp_overlap 3468401 3468406, overlap 3468393 3468395 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC hicB 3468845 - 3468486 - | hypothetical protein yhhJ 3470317 - 3469190 - | putative transporter TERM 4391 3469534 - 3469518 - G 70 -10.1 -3.24232 | overlap 3469516 3469514 GTGGTGGCAAACAGA CTGAGCG CCA CGCCCAG CATAAACAGCGGGAT yhiH 3472998 - 3470314 - | putative ATP-binding component of a transport system, fragment 1 TERM 4392 3471826 - 3471804 - G 85 -11.3 -3.65351 | gap 1, overlap 3471786 3471783 CCACCGCCAGCGAAA GCCGCT-GGC GAAT GCCGAGCGGC AATGACTCCGGCAGA TERM 4393 3472737 - 3472718 - G 71 -2.1 -5.00884 | AGGCGGGCGAAAAAA TCGACGT TTTCAT ACACCGA CAAGGTGTGGTAGAG yhiI 3474113 - 3473046 - | hypothetical protein TERM 4394 3473766 - 3473776 + g 70 -6.8 -4.08144 | opp_overlap 3473753, overlap 3473757 3473774 CAGCGACTGCGCGGC GCGA GTT TCGC TTTGTCGTTGCTCCA TERM 4395 3474162 - 3474182 + r 74 -11.1 -2.80344 | opp_overlap 3474160 3474159, overlap 3474161 CGCGTGTTACAACTG CCGCCGAAC GAC GTTCAGCGG ATTCTTCCATCCGGG TERM 4396 3474575 - 3474587 + r 72 -9.1 -3.52918 | AGTGGTTATCTCAGG CCCTG CAC CAGGG TTAATTTGGCAATTA TERM 4397 3474814 - 3474824 + r 78 -5.4 -4.7657 | opp_overlap 3474812 3474814 AGGATCGACAAGAGA TAGC CCG GCTA TTTTTAAACTTTTTG insB 3475528 - 3475025 - | IS1 ORF2 SBO_3484 3475603 - 3475815 + | putative IS1 encoded protein yhiJ 3476790 - 3475777 - | hypothetical protein yhiL 3478065 - 3477052 - | hypothetical protein SBO_3487 3479168 - 3478998 - | putative IS1 encoded protein insB 3479251 - 3479763 + | IS1 ORF2 yhiM 3479800 - 3480852 + | hypothetical protein TERM 4398 3480900 - 3480873 - T 75 -6.4 -4.40358 | gap 1, opp_overlap 3480873 ACGTACCGGATAAAA CCAGCGTTGAC CATTTGC GT-AACGCTGG TTTTTCTTAGGCATC TERM 4399 3480873 - 3480900 + T 83 -6.4 -5.07486 | gap 1, opp_overlap 3480873 ACGTACCGGATAAAA CCAGCGTTGAC CATTTGC GT-AACGCTGG TTTTTCTTAGGCATC yhiN 3482369 - 3481167 - | hypothetical protein TERM 4400 3483220 - 3483201 - g 70 -4.2 -4.65933 | overlap 3483197 GAGCGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 3482601 - 3484100 + | low affinity phosphate transport TERM 4401 3484292 - 3484313 + T 100 -7.9 -5.66684 | TGTAATCAGTCTCGA GCGGGTCAG TTTA CTGGCCAGC TTTTTTTATGCGTTA yhiO 3484679 - 3484344 - | universal stress protein UspB uspA 3485070 - 3485504 + | universal stress protein TERM 4402 3485531 - 3485548 + F 100 -14.1 -4.77757 | CGACGTGTTCCTGAA CGCCCGC ATAT GCGGGCG TTTTGCTTTTTGGCG TERM 4403 3486888 - 3486898 + G 70 -4.6 -4.56597 | TCGGCATGTTTATGT GCTC ACT GGGC TTTTTGACGGCGGCA yhiP 3485822 - 3487291 + | inner membrane transporter YhiP TERM 4404 3487307 - 3487332 + T 100 -19.1 -4.19735 | opp_overlap 3487307 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACGG TERM 4405 3487332 - 3487307 - T 100 -19.1 -3.86346 | opp_overlap 3487307 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACGG yhiQ 3488092 - 3487340 - | putative methyltransferase TERM 4406 3487951 - 3487928 - G 70 -4.6 -4.49531 | gap 1 AACAAAATCAACAAA GATGCCGCCAA GTT TTGGCT-CATC ACGCTTGCGCAATTC TERM 4407 3488046 - 3488067 + g 88 -11.5 -3.794 | opp_overlap 3488048, overlap 3488048 GCCGCCAGAACAGAT AAGGCGCCG TCTC CGGCGCCTG TTTCATCAATTAAGC TERM 4408 3488065 - 3488048 - G 100 -14.1 -3.72788 | opp_overlap 3488046 3488048 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA TERM 4409 3488048 - 3488065 + g 95 -14.1 -3.48105 | opp_overlap 3488048, overlap 3488046 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA prlC 3490142 - 3488100 - | oligopeptidase A TERM 4410 3488184 - 3488206 + g 74 -10.6 -3.21276 | opp_overlap 3488173, overlap 3488183 CAGATCCATCGGCTC TTCTGAACCG CCA CGGCTCAGAA TGTTGTCGAGGAACG TERM 4411 3489263 - 3489273 + g 70 -4.6 -4.46581 | opp_overlap 3489257, overlap 3489257 TTAAGAAATCCAGCA CCTG CTG CGGG TTTTCTGCCATTTTA TERM 4412 3490298 - 3490317 + H 76 -4.8 -4.8622 | overlap 3490299 CTGATACGCTTTTGT GCGCCCCG AATA CGGGCCGA TTTTTACTTACCGGA TERM 4413 3490786 - 3490768 - g 77 -6.6 -4.56597 | GCGCGCGTCGAAAAA GCCGATGG TTT CCAGCAGC TTAAGGCCAAACTGC TERM 4414 3490870 - 3490856 - g 75 -5.6 -4.58773 | CGTATGAAATGAAAA CCGACT ATC AGGCGG TGGTCAGCGGGATAG yhiR 3490345 - 3491187 + | hypothetical protein gor 3491259 - 3492611 + | glutathione reductase TERM 4415 3492646 - 3492620 - f 100 -13.8 -3.71649 | opp_overlap 3492613 3492620 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG TERM 4416 3492620 - 3492646 + F 100 -16 -3.43217 | opp_overlap 3492620, overlap 3492613 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG TERM 4417 3493105 - 3493075 - f 100 -15.7 -3.54543 | opp_overlap 3493083, overlap 3493083 ACTCAGGGCTGGAAA GTAAAAAACCGAC GCAAA GTCGGTTTTTTAC ATCCGGATTCGGACA TERM 4418 3493083 - 3493097 + F 85 -7.1 -5.08824 | opp_overlap 3493083 3493075 CTGGAAAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTACATCCGGA TERM 4419 3493097 - 3493083 - f 90 -7.1 -5.37593 | opp_overlap 3493083, overlap 3493075 CTGGAAAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTACATCCGGA TERM 4420 3493336 - 3493305 - f 75 -9.7 -3.54543 | gap 1, opp_overlap 3493313, overlap 3493313 ACTCAGGGCTGGAAA GTAAAAAA-CCGAC GCAAA GTCGGTTTTTTTAC GTCCTGATTCAGACC TERM 4421 3493327 - 3493313 - f 90 -7.1 -5.37593 | opp_overlap 3493313, overlap 3493305 CTGGAAAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG TERM 4422 3493313 - 3493327 + F 91 -7.1 -5.48825 | opp_overlap 3493313 3493305 CTGGAAAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG arsR 3493487 - 3493840 + | DNA-binding transcriptional repressor ArsR TERM 4423 3494101 - 3494116 + G 90 -6.8 -5.08824 | TATCATCAGCCTGCT GCTGGA TGAG TCCGGC TTTTTTGAATGGGCG arsB 3493874 - 3495184 + | arsenical pump membrane protein arsC 3495197 - 3495622 + | arsenate reductase SBO_3502 3496052 - 3495756 - | hypothetical protein SBO_3503 3497252 - 3496413 - | IS911 ORF2 TERM 4424 3496821 - 3496832 + g 77 -5.8 -4.63218 | opp_overlap 3496817 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 4425 3498740 - 3498750 + G 78 -5.4 -4.87133 | overlap 3498728 CCGGGTTCGTTCTAA CCTT GTC AAGG TTTTATTTCGAAGAT yhiS 3498055 - 3498849 + | hypothetical protein TERM 4426 3500010 - 3500044 + G 74 -10.6 -3.14564 | TGGGATTACGGCTAT GGTGCATTCTGGCCGG AAC CGGGCTGGGGTGCGCC TTACTACACCAATGC slp 3499494 - 3500093 + | Slp TERM 4427 3500104 - 3500134 + F 78 -12.7 -2.55015 | opp_overlap 3500105, overlap 3500100 AATAACACCACCGAA AGATGCAGATGCT TTCTC AGCATCTGCATCG TGCATTACATAAAAT TERM 4428 3500133 - 3500105 - f 100 -16.2 -3.72009 | opp_overlap 3500104 3500100 ATAACACCACCGAAA GATGCAGATGCT TTCTC AGCATCTGCATC GTGCATTACATAAAA yhiF 3500249 - 3500779 + | hypothetical protein TERM 4429 3501484 - 3501514 + T 100 -12.6 -4.93968 | opp_overlap 3501484 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT TERM 4430 3501514 - 3501484 - T 100 -14.8 -4.93595 | opp_overlap 3501484 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT hdeB 3501870 - 3501532 - | acid-resistance protein TERM 4431 3501937 - 3501890 - R 73 -10.8 -3.00259 | gap 1, opp_overlap 3501894, overlap 3501894 TATATAGATTATATA TGAACAGG-AGGAATAGCTGCTT TTA AAGAAGATATTCCGGCCTGTTCA ATATGCAAGGAAGTA hdeA 3502306 - 3501974 - | acid-resistance protein TERM 4432 3502156 - 3502143 - G 72 -6.7 -4.25283 | AGCGCTTCAGCAAAA CCAAC TGCA GTTGG CTGGAAGGATTCGTC hdeD 3502561 - 3503133 + | acid-resistance membrane protein TERM 4433 3503150 - 3503184 + F 100 -15.9 -3.26545 | opp_overlap 3503137 3503160, overlap 3503151 TACCCCGGTTGTCAC CCGGATCATAGTCAC TTGAT GTGACTATGATCCGA TTAATACTCTCTCCG TERM 4434 3503151 - 3503183 + F 100 -19.4 -2.55606 | opp_overlap 3503137 3503160, overlap 3503150 ACCCCGGTTGTCACC CGGATCATAGTCAC TTGAT GTGACTATGATCCG ATTAATACTCTCTCC TERM 4435 3503559 - 3503579 + F 85 -14.1 -3.05384 | opp_overlap 3503559 ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC TTAAGTCGAAACAAG TERM 4436 3503579 - 3503559 - f 100 -14.1 -4.65263 | opp_overlap 3503559 ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC TTAAGTCGAAACAAG yhiE 3503932 - 3504459 + | hypothetical protein TERM 4437 3504622 - 3504640 + F 95 -3.1 -6.02345 | overlap 3504599 AATGCTGGCAGGAAC TGTTGGC AGAAC GGCAACA TTTTTTTTGTCGTTG TERM 4438 3505151 - 3505113 - g 71 -9.6 -3.56594 | gap 1, overlap 3505104 3505103 CTAAACTCCGCCAAA GGC-TCGCTGGCGAAAG CGCTCT CTACCGCCAGCAATGCC CGCATCACCTTTAAC yhiU 3504798 - 3505955 + | multidrug resistance efflux protein MdtE yhiV 3505980 - 3509093 + | putative transport system permease protein TERM 4439 3509105 - 3509138 + T 100 -14.8 -3.78953 | opp_overlap 3509102 3509105 3509107 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 4440 3509138 - 3509105 - T 79 -12.6 -2.92667 | opp_overlap 3509105, overlap 3509102 3509107 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 4441 3509384 - 3509371 - T 70 -9.5 -2.99057 | overlap 3509368 TGCGAAAGAGAACTA GCCGG TAGC CCGGC AGAAATCATCAGGGA yhiW 3510184 - 3509456 - | putative ARAC-type regulatory protein yhiX 3511376 - 3510552 - | DNA-binding transcriptional regulator GadX TERM 4442 3511551 - 3511536 - R 82 -5.4 -5.1523 | overlap 3511537 TTTATAATACAAAAA CGCGTT TAAG AACGCA GTGAAATTAATAGCA TERM 4443 3511730 - 3511684 - R 86 -10.9 -3.72324 | opp_overlap 3511688, overlap 3511688 TATTGCGATTAATAA GCAACCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGGTTTT TACAACGTTATGTTA TERM 4444 3511688 - 3511726 + r 100 -18.3 -4.60255 | opp_overlap 3511688 3511684 GCGATTAATAAGCAA CCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGG TTTTTACAACGTTAT TERM 4445 3511726 - 3511688 - R 100 -16.1 -3.56142 | opp_overlap 3511688, overlap 3511684 GCGATTAATAAGCAA CCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGG TTTTTACAACGTTAT gadA 3513146 - 3511746 - | glutamate decarboxylase isozyme TERM 4446 3512534 - 3512544 + g 72 -6.8 -4.25283 | opp_overlap 3512525, overlap 3512525 CGAAAGTCGGCACCA CACC GAT GGTG TTTTCGTCACAGGCT TERM 4447 3513347 - 3513322 - R 100 -14.1 -5.08601 | opp_overlap 3513318 TTATCGTAATAAAAA TCGCCCAAACA TTCC TGTTCGGGCGA TCAAATTAGTTATTG yhjA 3514754 - 3513357 - | putative cytochrome C peroxidase TERM 4448 3513742 - 3513756 + g 75 -7.1 -4.34402 | TAGCCTTTTTTCTGT TGCGC CGTCA GCGCA TTTTCATCTCCACGC TERM 4449 3513876 - 3513899 + g 70 -3.8 -4.62471 | gap 1, overlap 3513879 CGGATAAACTTCGAG GAACTGC-GCT TTA AGCTGCGGATC TTTTTCCAGCTTAGC TERM 4450 3516765 - 3516779 + G 74 -7.8 -4.06001 | opp_overlap 3516765, overlap 3516767 3516770 GTTTGGCTGGACTAA CGGTGT GGT ACGCCG TTTAATTGGTTTGTA treF 3515158 - 3516807 + | trehalase TERM 4451 3516851 - 3516808 - T 82 -11.2 -3.51329 | opp_overlap 3516811 3516850, overlap 3516811 TACGGCGAACCATAA TATTTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAATTA TCCTCTTCAGGAGGA TERM 4452 3516848 - 3516811 - T 81 -12.9 -2.59447 | opp_overlap 3516811, overlap 3516808 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA TERM 4453 3516811 - 3516848 + T 90 -12.9 -3.52073 | opp_overlap 3516811 3516808 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA yhjB 3517460 - 3516858 - | putative regulator TERM 4454 3518016 - 3518050 + G 72 -4.8 -4.62772 | opp_overlap 3518016 3518017, overlap 3518017 3518018 CAGTTGTTCATCAAA GTCGCGGAGCTGGAAA GTT TTTCCCGCGCAGCGGA TTTCTTTGCTTTGCC yhjC 3517908 - 3518879 + | putative transcriptional regulator LYSR-type yhjD 3518928 - 3519941 + | hypothetical protein TERM 4455 3519943 - 3519980 + F 71 -10.5 -2.62512 | opp_overlap 3519935 3519944 3519947, overlap 3519942 3519941 3519956 AAACGCAGCCTTAAA ATAGGCCGGATGCGGCG TAAA CGCCTTATCCGGCATAC GATTTTATTCGGCCT TERM 4456 3519979 - 3519944 - f 95 -11.8 -4.1196 | opp_overlap 3519943 3519942 3519941 3519956, overlap 3519935 3519947 AACGCAGCCTTAAAA TAGGCCGGATGCGGCG TAAA CGCCTTATCCGGCATA CGATTTTATTCGGCC TERM 4457 3519976 - 3519947 - f 82 -13.5 -2.79004 | opp_overlap 3519943 3519942 3519941 3519956, overlap 3519935 3519944 GCAGCCTTAAAATAG GCCGGATGCGGCG TAAA CGCCTTATCCGGC ATACGATTTTATTCG TERM 4458 3520008 - 3520039 + F 82 -13 -2.78596 | opp_overlap 3520017 3520019 CCTGGCTCCCCGTAG GCCGGATAAGATGC GCCA GCATCGCATCCGGC TATAATGCGCACATA TERM 4459 3520433 - 3520453 + G 79 -9.7 -3.73106 | GTCCTTGTCGCCTCT CTCATTGGC ACA GCCATTGAG TTCTTCGACTTTTAC TERM 4460 3520588 - 3520598 + G 75 -4.6 -4.86773 | CGTCGCGCGCCCTAT TGGC TCT GCCG TTTTTGGTCATTTTG TERM 4461 3520943 - 3520954 + G 70 -5.8 -4.27117 | TTTATGAGCTGGGGC TGGC GTGT GCCA TTTATCTTCTCGGCG TERM 4462 3521330 - 3521310 - g 77 -8.3 -4.07568 | TTGGTCGCCGTAAAA GCATGGTAA TCA TCACCACGC TGCTCATCCTGTTCG yhjE 3520352 - 3521674 + | putative transport protein yhjG 3523983 - 3521908 - | hypothetical protein TERM 4463 3523908 - 3523886 - G 72 -7 -4.1899 | overlap 3523899 CGATTCCAGTCAAAA GTTGCAATCA AAA TGATCGCCAC GACAATCAACAACAA yhjH 3524808 - 3524038 - | EAL domain-containing protein TERM 4464 3525815 - 3525802 - g 82 -3.1 -5.27335 | CTGCCGAAAGAAAAA GTGAT CGAT ACCAC CGCAGCTGGCGACTC kdgK 3524818 - 3525966 + | ketodeoxygluconokinase TERM 4465 3526015 - 3525984 - T 76 -8 -4.24948 | overlap 3525985 GCAGCATATGCAAAA GGCTGGATAAAGTG TTAC CCCTCTATCCAGCT CATCCATAAATACCT TERM 4466 3526014 - 3525985 - T 77 -11.5 -3.14487 | overlap 3525984 CAGCATATGCAAAAG GCTGGATAAAGTG TTAC CCCTCTATCCAGC TCATCCATAAATACC yhjJ 3527558 - 3526062 - | hypothetical protein TERM 4467 3527611 - 3527594 - R 81 -3.3 -5.4505 | CCTGGTAATAAAAAA CTGCCCG TTGT CAGTCAG TCTAAATGACGTTAA TERM 4468 3527712 - 3527684 - R 100 -14 -4.52669 | opp_overlap 3527691 AAGAAGTGAAATAAA CCTGAACTCACC CAGGT GGTAAGTTCAGG CACAGGGGTCAATTA TERM 4469 3527765 - 3527736 - R 72 -9.3 -3.59315 | overlap 3527738 TCAATTATGCGCAAA CACCCGCACTC GGGGAAGG GAGTGCGGGCA TAAGTGGTGAGATTA TERM 4470 3527763 - 3527738 - R 82 -11.9 -3.37259 | overlap 3527736 AATTATGCGCAAACA CCCGCACTC GGGGAAGG GAGTGCGGG CATAAGTGGTGAGAT dctA 3529064 - 3527778 - | C4-dicarboxylate transporter DctA TERM 4471 3528842 - 3528830 - G 74 -7.7 -4.08317 | opp_overlap 3528841 CAATTTCAAAGTAAA GCAGT GCG ACTGC GCCGGTACGACCGAC TERM 4472 3529209 - 3529188 - R 73 -4.4 -4.7657 | opp_overlap 3529192 3529194 CAAAAAGGTTAAAAA GTTTGAGC TGGCTC GCACAAAC CAGCACTTTTTAAAG yhjK 3531202 - 3529247 - | putative phosphodiesterase yhjL 3534478 - 3531317 - | putative oxidoreductase subunit TERM 4473 3533461 - 3533482 + g 75 -4.4 -4.8543 | gap 1, opp_overlap 3533461 GCTGACTGGCAGAGA GC-GAGGCG ATAAA CGCTTCAGC TTTTTCTGGCGATTG TERM 4474 3534266 - 3534277 + g 70 -5.8 -4.24294 | overlap 3534261 ATTGCCCGGTGCATC CGCA TTGA TGCG TTTTAACTGATTAAT yhjM 3535878 - 3534772 - | endo-1,4-D-glucanase TERM 4475 3534937 - 3534949 + g 75 -6.9 -4.36914 | overlap 3534918 CTGACGCTGAACGGC CTGCG CAT CGCGG TTTTGTAAAAAGGGC yhjN 3538224 - 3535885 - | cellulose synthase regulator protein TERM 4476 3536866 - 3536886 + g 84 -11.1 -3.79519 | opp_overlap 3536853 TACCGGAATCCGCAG CAGCAGGCG GTT CGCCTCCTG TTTGCTGCTCAGGTT bcsA 3540847 - 3538235 - | cellulose synthase catalytic subunit TERM 4477 3539579 - 3539568 - G 72 -5.8 -4.33248 | opp_overlap 3539567 GAACCGCAGAAGAAA GTGG CGTC CCAC ATATCGTTGCCATCC yhjQ 3541572 - 3540844 - | cell division protein yhjR 3541796 - 3541608 - | hypothetical protein yhjS 3542069 - 3543640 + | putative protease yhjT 3543640 - 3543828 + | hypothetical protein TERM 4478 3544802 - 3544816 + G 74 -2.7 -5.00884 | opp_overlap 3544802 GATGATGGGACATAA CGGCC AGTTC GGCGG TTTTTTGAAAGAAGT yhjU 3543825 - 3545504 + | hypothetical protein TERM 4479 3545540 - 3545515 - f 100 -16.2 -4.81685 | AGTAAGCACGAAAAA GGCCGCAGAG TTTAAC CTCTGCGGCC TGATCCGGGCGCAAA TERM 4480 3545765 - 3545806 + F 100 -13.2 -4.60797 | gap 2, opp_overlap 3545764 TGGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC yhjV 3546174 - 3547445 + | putative transporter protein TERM 4481 3547447 - 3547465 + T 71 -7.3 -4.14392 | opp_overlap 3547447 AGCTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGCGAGTTAACG TERM 4482 3547465 - 3547447 - T 79 -9.5 -3.76402 | opp_overlap 3547447 AGCTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGCGAGTTAACG dppF 3548479 - 3547475 - | dipeptide transporter ATP-binding subunit TERM 4483 3547563 - 3547515 - G 78 -7.4 -4.32583 | gap 2, overlap 3547512 3547519 TCAACAGCAAAACAA GCTACCAGTTGACCGCCGTAGTCT TTT AG-CTGCGGCTG-CAACTGGGTGC AGGGGCCGAAGCGCC dppD 3549459 - 3548476 - | dipeptide transporter ATP-binding subunit TERM 4484 3549360 - 3549409 + g 70 -10.7 -2.83403 | gap 1, overlap 3549359 3549402 CAATCCCAACCACTT CGCCCTGTTTTACGCTGTAG-CTG ATG CGGTCTACGGCGCGGAACGGTGCG CTTTCGTCGCCGAAA dppC 3550372 - 3549470 - | dipeptide transporter dppB 3551401 - 3550382 - | dipeptide transporter permease DppB TERM 4485 3552460 - 3552476 + r 83 -9.5 -4.02424 | TTCAGCCCCGGCATT TCCATCA GGT TGATGGA TTTATCCTGCTTCAT TERM 4486 3554049 - 3554031 - R 100 -14.6 -5.22039 | opp_overlap 3554031 TTCAAATGCAAAAAA GCCTGCTC GCT GAGCAGGC TTTTCGAATTTGGTC TERM 4487 3554031 - 3554049 + r 100 -14.6 -4.25074 | opp_overlap 3554031 TTCAAATGCAAAAAA GCCTGCTC GCT GAGCAGGC TTTTCGAATTTGGTC yhjW 3555919 - 3554228 - | phosphoethanolamine transferase TERM 4488 3556158 - 3556141 - R 100 -12.7 -4.88129 | AAAAAGCAGTAAAAA GGGCCAG TTAA CTGGCCC TTAAGATGTGAAATT lpfA 3556701 - 3556159 - | putative major fimbrial subunit SBO_3547 3556964 - 3556707 - | putative IS1 encoded protein insB 3557039 - 3557542 + | IS1 ORF2 TERM 4489 3557648 - 3557629 - T 100 -12.2 -5.24129 | opp_overlap 3557626 TGCGTCCATAAAAAA GGGAGACT TTGA AGTCTCCC TCCTCGTATTTATTT yhjX 3558882 - 3557680 - | putative resistance protein TERM 4490 3558976 - 3558962 - R 78 -6.4 -4.56775 | overlap 3558963 ATGCCTGGGGAAAAA CGGCAT GAA ATGCCA TCAGAACGGAATGAA yhjY 3559814 - 3559110 - | putative lipase TERM 4491 3559400 - 3559370 - G 79 -12.6 -3.06133 | overlap 3559372 CAAGCCGGGAGTCAA CACGCCAGCCTAAG CTA CTCACGCTGGCATG CCATAACGGATCGGT TERM 4492 3560137 - 3560122 - g 83 -6.1 -5.00884 | ACCGTCCTCAAAAAA CGCGA AAACTA TCGCG CCTGCTTTCATCAGT tag 3559966 - 3560529 + | 3-methyl-adenine DNA glycosylase I TERM 4493 3560631 - 3560654 + G 72 -11 -3.07895 | opp_overlap 3560621 AATTACTGGCGTGAT TGCATTCCGC TGGT GCGGGATGCG TATCTTGCCAATGCG yiaC 3560526 - 3560966 + | hypothetical protein bisC 3563154 - 3560935 - | biotin sulfoxide reductase TERM 4494 3561029 - 3561051 + g 73 -11.3 -2.66695 | overlap 3561028 3561027 TTACCCGCACAGCCA TTCCCCAGC CGCGA GCTGGGGAG ATCTTTGGTCAGCAC TERM 4495 3562380 - 3562394 + g 78 -8.5 -4.28656 | CCCCACAAATCCCTG CCGCC CATTC GGCGG TTTTGGCTATTCCGT TERM 4496 3563395 - 3563368 - H 70 -9.2 -3.30124 | gap 1 GTTCACGCGGCATAA TCTCCCGCCACGG AAC CCGTGGCAA-AGA ATAAAAAGGTTATTA yiaD 3563421 - 3564080 + | putative outer membrane lipoprotein TERM 4497 3564090 - 3564117 + F 100 -14.3 -3.82481 | CTGTAATCCCTTTCA TGCCAGGTGAT GCAGAA ATCACCTGGCA TTCTTCAGTTTTCCT TERM 4498 3564318 - 3564300 - g 70 -3.8 -4.64334 | overlap 3564302 3564304 AACCGTCGAACAAAA TGCAGCAA TTT TTGCCGAA GCTGAAGGTTTACTG yiaE 3564184 - 3565158 + | putative dehydrogenase TERM 4499 3565180 - 3565198 + T 82 -7.4 -4.55446 | opp_overlap 3565180 ACTGCGTGAAGTAAA GCCCGA TAATCGC TCGGGC TTTTACTCTTTATTG TERM 4500 3565198 - 3565180 - T 71 -7.4 -3.90291 | opp_overlap 3565180 ACTGCGTGAAGTAAA GCCCGA TAATCGC TCGGGC TTTTACTCTTTATTG yiaF 3566038 - 3565208 - | hypothetical protein TERM 4501 3565253 - 3565282 + g 70 -4.4 -4.46675 | gap 2, overlap 3565236 3565257 3565259 GGCCTGATTAAACGC CTGATGTTGTGCCG GTAA CGGCGC-A-ATCAG TTTGTTATATTCACT yiaG 3566351 - 3566641 + | putative transcriptional regulator TERM 4502 3566668 - 3566687 + F 100 -13.6 -4.08692 | CTTTATTGCTGTTTA CGGTCCTG ATGA CAGGACCG TTTTCCAACCGATTA cspA 3566922 - 3567134 + | major cold shock protein TERM 4503 3567163 - 3567182 + T 100 -11.4 -6.47325 | opp_overlap 3567153 3567148 3567163 3567161 GCACAGAATCTAAGA TCCCTGCC ATTT GGCGGGGA TTTTTTTTATTTTTT TERM 4504 3567313 - 3567294 - T 100 -13.6 -4.1673 | CAACGCCGTAAGAAA GGCGGGAA TAAT TTCCCGCC GAAGACTCTTACTCT yiaZ 3567474 - 3567322 - | small toxic polypeptide TERM 4505 3567541 - 3567570 + r 78 -6.5 -4.64844 | gap 1, opp_overlap 3567508, overlap 3567510 3567507 TTCAGGCATAGGGTA GCCTCACTTTGATT TAT AGTCAG-GTGGGGC TTTTCTCTGTCTGCC SBO_3560 3567820 - 3567638 - | putative IS1 encoded protein insB 3567895 - 3568398 + | IS1 ORF2 SBO_3562 3568634 - 3568392 - | putative IS1 encoded protein insB 3568709 - 3569212 + | IS1 ORF2 TERM 4506 3569255 - 3569233 - T 71 -3.5 -4.77438 | opp_overlap 3569233 AGTCATTACCAAAAA TCTCATAAA ATTAA TATATGAGA TAATCTTTATTCAGC TERM 4507 3569317 - 3569334 + T 100 -12.7 -4.72272 | opp_overlap 3569317 GCGATAATAAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGGCG TERM 4508 3569334 - 3569317 - T 100 -12.7 -5.88565 | opp_overlap 3569317 GCGATAATAAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGGCG glyS 3571422 - 3569353 - | glycyl-tRNA synthetase subunit beta TERM 4509 3570863 - 3570853 - G 72 -8.2 -3.85698 | CGGTTCGCCCATAAA GCGG TGG CCGC GAATCACGCGATCGG glyQ 3572343 - 3571432 - | glycyl-tRNA synthetase subunit alpha TERM 4510 3571638 - 3571656 + g 70 -6.7 -4.12254 | gap 1 GCAGCGGATTTTCCA GCGCCAGC AGCT GCTG-CGC TTCTTTCTCGTACTG SBO_3566 3572737 - 3572438 - | putative lipoprotein TERM 4511 3572544 - 3572562 + g 77 -3 -5.14563 | overlap 3572549 CTTCCCTGGAACTGT TCGAAGGC GGT GACGTCGA TTTTTTGCTCGCCGG SBO_3567 3573382 - 3574287 + | insertion element IS2 transposase InsD insB 3574502 - 3575005 + | IS1 ORF2 TERM 4512 3575179 - 3575191 + G 71 -3.3 -4.84363 | TTCTGCCTCTCGTGT CAGCG TGC CGCTA TTTTTCATGATTTCC yiaH 3575024 - 3576019 + | hypothetical protein TERM 4513 3576051 - 3576026 - T 75 -6.1 -4.43477 | opp_overlap 3576026 GTGAGTTAAGTAAAA GCCCGTTCA CATTGGAC TGACCGGGC TTACGTGAATTATTC yiaA 3576501 - 3576061 - | hypothetical protein yiaB 3576897 - 3576544 - | hypothetical protein TERM 4514 3576610 - 3576592 - G 82 -2.4 -5.42131 | CAAGCAGACAAAAAA GGCGAT GGGGTAG ATCACC ATTTCATAAGCATTG xylB 3578493 - 3577174 - | xylulokinase TERM 4515 3577476 - 3577461 - G 77 -3.2 -5.04868 | opp_overlap 3577462, overlap 3577462 TCAAACCAAAGAAAA CCCC CTTCGCCT GGGG ATTATTGTGTGGTGT TERM 4516 3578543 - 3578515 - R 100 -9.6 -5.40072 | gap 1, opp_overlap 3578540, overlap 3578516 CGTTCCTTAAAAAAA TGCCCGG-TATCG CTAC CGATAACCGGGCC AACGGACTGCACAGT TERM 4517 3578542 - 3578516 - R 95 -13.1 -3.83561 | gap 1, opp_overlap 3578540, overlap 3578515 GTTCCTTAAAAAAAT GCCCGG-TATCG CTAC CGATAACCGGGC CAACGGACTGCACAG xylA 3579887 - 3578610 - | xylose isomerase TERM 4518 3579430 - 3579447 + g 74 -8.3 -3.86822 | GGGTTCGTCGCCGCA CCCGCGC CATA GCGAGGG TTTGTAAAGCAGTTA xylF 3580253 - 3581224 + | D-xylose transporter subunit XylF TERM 4519 3581228 - 3581256 + F 95 -12.4 -4.0641 | opp_overlap 3581215 AGCGAGCTGTAAGCG TTACGCCCCGGC GCGGA GCGGGGGCGTGA TTTCTCTCCATGCCG TERM 4520 3582551 - 3582541 - g 85 -6.8 -4.81083 | GGCAATCAGCAAAAA GCGA TCC TCGC CCGCTGTCTGTTACT xylG 3581302 - 3582843 + | xylose transporter ATP-binding subunit xylH 3582821 - 3584002 + | putative xylose transport, membrane component TERM 4521 3584019 - 3584050 + F 100 -12.4 -4.7078 | opp_overlap 3584026 TTTGATAAAAATTTT CTCAAAGCCGGTTA CGTA TTACCGGTTTTGAG TTTTTGCATGATTCA TERM 4522 3584391 - 3584409 + G 81 -6 -4.81249 | opp_overlap 3584391 3584406 TGCCACCGATAACTA TGCGCT GGTTGAA AGCGCA TTTTTGCATTTAAAA TERM 4523 3584427 - 3584447 + G 74 -3.2 -4.98436 | TTTGCATTTAAAAGA GAAAGGCG TTAAC CGCTTTGC TTTTTATGGTCTTCC xylR 3584080 - 3585258 + | putative regulator of xyl operon TERM 4524 3585351 - 3585322 - T 87 -10.1 -4.26903 | CTGATGCGAGCAAAA GCCTTATCCGACC GACA AATCAGATAAGGC TCAAGGAAATGCAAT bax 3586190 - 3585366 - | hypothetical protein TERM 4525 3585947 - 3585957 + g 71 -2.4 -4.92777 | overlap 3585947 AAGGCATTACGGTCC GGAG AAA CGCC TTTTTCCTTGGTGTT TERM 4526 3586997 - 3587015 + G 72 -8.8 -3.80573 | opp_overlap 3586997 3586996 AAATAACGTTACAAC CCGCTGCT ACC AGCAACGG TTTACTCCTGCTGGA TERM 4527 3588465 - 3588483 + G 72 -6.6 -4.2461 | overlap 3588472 ACAAACGACACTTTC GCTGAAGC AGG GCTACGGC TTTGTTCGTGAGCAT malS 3586510 - 3588540 + | periplasmic alpha-amylase precursor TERM 4528 3589810 - 3589798 - g 71 -9.1 -3.54741 | TATCAGCGCCTGAAA GCACG CGG CGTGC TGATGGTGCCGGGGC avtA 3588718 - 3589971 + | valine--pyruvate transaminase TERM 4529 3590089 - 3590119 + T 72 -9.1 -3.53444 | gap 1, opp_overlap 3590086 3590085, overlap 3590089 CATAAACAAAGCGCA C-TATTCCGGCGTT GAGA AACGCCGGAAAACG TTTCAAACAGGCTGC yiaI 3590595 - 3590122 - | hypothetical protein yiaJ 3591545 - 3590697 - | putative regulator TERM 4530 3591744 - 3591732 - H 85 -3.3 -5.54894 | AAGCGATCAAAAAAA CAAGG AAG CCTGG GATGAAAGTGACATT yiaK 3591746 - 3592744 + | 2,3-diketo-L-gulonate reductase yiaL 3592756 - 3593178 + | putative lipase TERM 4531 3593362 - 3593352 - g 93 -4 -5.53991 | TAGCTATGAAAAAAA TACT TGA AGTA ATACTGGCGATTAAT yiaM 3593342 - 3593815 + | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM insB 3595054 - 3595557 + | IS1 ORF2 aldB 3597503 - 3595875 - | aldehyde dehydrogenase B TERM 4532 3596697 - 3596685 - G 71 -9.1 -3.55444 | opp_overlap 3596684 3596691 CGTTGAGCCGGTAAA CGCCA CTT TGGCG ATGCGTTTCGAGGTC TERM 4533 3597164 - 3597144 - G 85 -11.9 -3.66356 | overlap 3597149 ATCGGCAATCTTAAA CAGAATCGC CGC GCGATCCTG CACCGAGGTGTGCGC TERM 4534 3597563 - 3597541 - R 93 -9.8 -4.65838 | opp_overlap 3597542, overlap 3597542 GAGATAGTTGAAAAA GCGGCTGACA ATT TGCCAGCCGT TGTGGAAATGATGAT TERM 4535 3597562 - 3597542 - R 86 -13.3 -3.3878 | opp_overlap 3597542, overlap 3597541 AGATAGTTGAAAAAG CGGCTGACA ATT TGCCAGCCG TTGTGGAAATGATGA TERM 4536 3597542 - 3597562 + r 79 -11.1 -3.31792 | opp_overlap 3597542 3597541 AGATAGTTGAAAAAG CGGCTGACA ATT TGCCAGCCG TTGTGGAAATGATGA yiaY 3598729 - 3597578 - | putative alcohol dehydrogenase TERM 4537 3598309 - 3598345 + g 70 -6.6 -4.07885 | gap 1 TTTCAGAGGCCGTAC CCGCAG-TGGTGTTGAT GGCG ATCATCGGCAGCTGCGG TTTTGCAGAGCGGTC TERM 4538 3598868 - 3598821 - R 76 -8.9 -3.73345 | gap 1, opp_overlap 3598832, overlap 3598832 AATTATCAAAATTAA TCTAATAAAAAGCACATTGTAT TCATT AAACAATGTGCTTTTT-TTAAA ATCATAAGAAATTTG TERM 4539 3598858 - 3598832 - R 100 -8.1 -5.13741 | opp_overlap 3598832, overlap 3598821 TTAATCTAATAAAAA GCACATTGTAT TCATT AAACAATGTGC TTTTTTTAAAATCAT TERM 4540 3598832 - 3598858 + r 100 -8.1 -5.44721 | opp_overlap 3598832 3598821 TTAATCTAATAAAAA GCACATTGTAT TCATT AAACAATGTGC TTTTTTTAAAATCAT TERM 4541 3598950 - 3598940 - R 71 -6.8 -4.08557 | overlap 3598941 TTCCGGAAATAATAA TGCG TCG CGCA ATAAATGATCATTTC selB 3600763 - 3598919 - | selenocysteinyl-tRNA-specific translation factor TERM 4542 3600059 - 3600075 + g 76 -7.9 -4.22009 | GTTAAGCGCGATACG CTGCCCG GCA TGGGCGG TTTCTGTTGGCTGGT TERM 4543 3600318 - 3600371 + g 71 -11.2 -2.94322 | gap 2, opp_overlap 3600335, overlap 3600316 3600335 ATTCCCCGACCTTCG GTTGCTGCGGTGATAAACAGTTTTGC CTCA GCAAAACCGTAT-TC-CCGCAGCACC TCCTTTACCTGGCGT TERM 4544 3600356 - 3600335 - G 76 -9.5 -3.85698 | opp_overlap 3600335 3600318 3600316 TGCTGCGGTGATAAA CAGTTTTGC CTCA GCAAAACCG TATTCCCGCAGCACC selA 3602151 - 3600760 - | selenocysteine synthase yibF 3602857 - 3602249 - | glutathione S-transferase TERM 4545 3602400 - 3602386 - G 70 -10 -3.1544 | CGACAGCACAGGCAA TGGCGA TAG TCGCCA GATTGACCGTATCGG TERM 4546 3602828 - 3602815 - G 70 -5.3 -4.35348 | ACAACAGAATAGAAA GTTTG CGTA CAAAC GGGCTGGTGTAGCTA TERM 4547 3603881 - 3603899 + G 75 -6.7 -4.30844 | gap 1, overlap 3603884 AGCAGGCCATTTCCG GCGGGACG GAAC CGTCC-GC TTTTCCTGATACCCT TERM 4548 3604457 - 3604479 + G 70 -5.6 -4.34402 | gap 1, opp_overlap 3604419 3604416 3604414 TCACGCGCATCACCA CGCCGGATG GCAGGG CATC-GGCG TTTTACTATAACCAC TERM 4549 3607257 - 3607267 + G 70 -6.8 -4.0162 | opp_overlap 3607244 3607249 AACATATGGGCCATC TGGG CAC CCCA TTTCTAATATGCAAG rhsA 3603085 - 3607314 + | hypothetical protein yibG 3607326 - 3607787 + | hypothetical protein TERM 4550 3608969 - 3608979 + T 82 -3.2 -5.54192 | TATATTAATAACTCA CTCT CCA GGAG TTTTTTTAACTTAGT yibH 3610528 - 3609392 - | hypothetical protein TERM 4551 3609789 - 3609809 + g 78 -12.5 -2.91264 | AAGACCATCACCGGA CGCAGCGGC AAG GCAGCTGCG TATGTACCTGGGCGG TERM 4552 3610326 - 3610352 + g 74 -7.4 -4.09685 | gap 1 ATTCCCGTCACCTGT GGC-GTGATAG GGATCG CTATCACTGCC TTTTGCGCGGTAAAA yibI 3610893 - 3610531 - | hypothetical protein TERM 4553 3611169 - 3611154 - H 85 -3.3 -5.50723 | opp_overlap 3611154 CCATCAAAACAAAAA TGTGA TACTAC TCACA TTTAAATGCCATTTT TERM 4554 3612964 - 3612931 - g 70 -10.4 -3.21276 | overlap 3612929 TGGGCGCGGAGAACA TCTTCCTCGGTCGC AAAGCA GCAACCAAAGAAGA AGCGATTCGTTTTGC TERM 4555 3613073 - 3613050 - g 75 -5.2 -4.59773 | opp_overlap 3613050 CTGGATCGTGAAAAA CTGACCCCGA CTTA TCTGGGTGAG TCTATCGCGGTGCCA mtlA 3611430 - 3613343 + | PTS system mannitol-specific enzyme IIABC components TERM 4556 3613383 - 3613344 - f 73 -10 -3.34344 | opp_overlap 3613349 3613350, overlap 3613349 GCAGGTCGTAAGTAA TCCAATCCCACCCTCTCC ACAT GGAGAAGGTGGGGTTAAT TGCCTGATGCGCTAC TERM 4557 3613349 - 3613378 + F 93 -14.3 -3.38316 | opp_overlap 3613344 3613349, overlap 3613350 TCGTAAGTAATCCAA TCCCACCCTCTCC ACAT GGAGAAGGTGGGG TTAATTGCCTGATGC TERM 4558 3613378 - 3613349 - f 90 -14.3 -3.23899 | opp_overlap 3613349 3613350, overlap 3613344 TCGTAAGTAATCCAA TCCCACCCTCTCC ACAT GGAGAAGGTGGGG TTAATTGCCTGATGC TERM 4559 3613350 - 3613377 + F 90 -15.6 -2.62668 | opp_overlap 3613349 3613344, overlap 3613349 CGTAAGTAATCCAAT CCCACCCTCTCC ACAT GGAGAAGGTGGG GTTAATTGCCTGATG TERM 4560 3613489 - 3613508 + F 93 -13.6 -3.64703 | opp_overlap 3613464, overlap 3613481 CGCATCCGGCGCTGC CCCTCTCC TCAC GGAGAGGG TTTGGGTGAGGGAAA TERM 4561 3613956 - 3613938 - g 81 -9.6 -4.07885 | CATCGCCTGTGAAAA CATGGTAC GCG GTACCACG CAGCTGAAAGGCCAT mtlD 3613573 - 3614721 + | mannitol-1-phosphate 5-dehydrogenase TERM 4562 3615149 - 3615176 + G 82 -12 -3.53012 | gap 1, overlap 3615149 TGGTGAACTGCACTG C-GTGGCGGCGTT ACC ACCGCCGCCACAG TTTGAACCAGCAGAC TERM 4563 3615149 - 3615175 + G 77 -12.2 -2.71712 | overlap 3615149 TGGTGAACTGCACTG CGTGGCGGCGTT ACC ACCGCCGCCACA GTTTGAACCAGCAGA mtlR 3614721 - 3615308 + | mannitol repressor protein TERM 4564 3615323 - 3615305 - T 76 -8.2 -4.10855 | AAAAGCCTTTCAAAA GTAAGCAA CGT CTGCTTAC TGCCCCTCTACCTGC SBO_3600 3615529 - 3615320 - | putative cytoplasmic protein yibL 3615814 - 3616176 + | hypothetical protein SBO_3602 3616851 - 3616609 - | putative IS1 encoded protein insB 3616926 - 3617429 + | IS1 ORF2 SBO_3604 3617496 - 3618179 + | putative lipoprotein SBO_3605 3618223 - 3622278 + | putative adhesin SBO_3606 3622690 - 3623595 + | insertion element IS2 transposase InsD TERM 4565 3623857 - 3623845 - gf 71 -2.7 -4.75472 | TGCAGAGGAAGAAAA TACAA TCT CTGTA GGTTCTTCTACTAAC SBO_3607 3623570 - 3624409 + | putative adhesin TERM 4566 3624477 - 3624449 - f 100 -17.6 -3.71917 | AGGGCAAACGCCAAA TTGCCTGATGCG TTACG CGCATCAGGCAA GATAAGGCGCTCCGG TERM 4567 3624506 - 3624531 + F 100 -14.1 -4.86731 | opp_overlap 3624501 3624506 GGGTCAACAATCTAA GGGCAATTCTC TGAT GAGGATTGCCC TTTTCTTTACCAGAC TERM 4568 3624531 - 3624506 - f 79 -11.9 -3.28745 | opp_overlap 3624506, overlap 3624501 GGGTCAACAATCTAA GGGCAATTCTC TGAT GAGGATTGCCC TTTTCTTTACCAGAC lldP 3624777 - 3626432 + | L-lactate permease TERM 4569 3626990 - 3627002 + G 80 -5.5 -5.02074 | CGTCAGCGGATGTAT CTGGT GCC ACCGG TTTTTTCACAACTGA lldR 3626432 - 3627208 + | DNA-binding transcriptional repressor LldR TERM 4570 3627321 - 3627303 - g 72 -11 -3.05343 | overlap 3627305 TGCATATTCTGAATA CACGCTGC GCC GCAACGTG GAAGATTTGTCAGAA lldD 3627205 - 3628395 + | L-lactate dehydrogenase SBO_3611 3628638 - 3629834 + | ISSfl2 ORF TERM 4571 3629976 - 3629998 + F 77 -12 -2.79302 | opp_overlap 3629964 CAATTTTCTGCTATC CTGCCCCC GCACTAA GGGGGCAG TATGCTAAACATCGT yibK 3630000 - 3630473 + | putative tRNA/rRNA methyltransferase YibK cysE 3631347 - 3630526 - | serine acetyltransferase TERM 4572 3630863 - 3630899 + g 70 -3.6 -4.7254 | opp_overlap 3630861 3630864, overlap 3630864 GTTTCACCCACAACG ATGCCCGTGGCGTGGT CGAGC ATAATGCCACGGCCAA TTTTTGCTGCCGGGT TERM 4573 3631401 - 3631372 - R 82 -11.5 -3.56987 | gap 1, overlap 3631375 CACACGATGAGATAA TGA-CCGGCCCG TTCTGCG CGGGCCGGGTCA TAGCGGTAACAAAGG TERM 4574 3631397 - 3631375 - R 82 -13.4 -2.90888 | overlap 3631372 ACGATGAGATAATGA CCGGCCCG TTCTGCG CGGGCCGG GTCATAGCGGTAACA gpsA 3632446 - 3631427 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 4575 3632340 - 3632366 + g 78 -8.7 -4.1552 | gap 1 ATATGTTCAGGGTCA TGGCCCCAGAGG ACAA CCTC-GTGGCCA TTTCTTGCCAGGGTA TERM 4576 3632444 - 3632460 + g 81 -10.9 -3.69283 | overlap 3632455 AGCATTACGTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3632913 - 3632446 - | preprotein translocase subunit SecB grxC 3633227 - 3632976 - | glutaredoxin 3 yibN 3633800 - 3633369 - | hypothetical protein yibO 3634045 - 3635589 + | phosphoglyceromutase TERM 4577 3635660 - 3635709 + G 81 -9.3 -4.07568 | gap 1, opp_overlap 3635660, overlap 3635671 GCAGGTTTGCAATCA GGCCCATCAT-CTACGCCAGCGTT CTT AGCGCTGGCGTATTGTTGTGCGCC TTTTCCGCCCACGCG TERM 4578 3635671 - 3635697 + G 100 -17.4 -3.81022 | opp_overlap 3635660, overlap 3635660 ATCAGGCCCATCATC TACGCCAGCGTT CTT AGCGCTGGCGTA TTGTTGTGCGCCTTT TERM 4579 3635991 - 3635953 - g 75 -5 -4.77036 | overlap 3635938 3635955 CTGGAGCAGCAAAAA GCCGCCCAGGAGCGCAGC CTC GCCGCACAACTGGATGCC GCATTCCGTCAGGGC TERM 4580 3636206 - 3636188 - g 78 -8.9 -4.27474 | overlap 3636205 AAAGCGAGCAACAAA CGCTGTT ATATG AACAGCG CGCCCAACAGGCGAA yibP 3635599 - 3636882 + | hypothetical protein TERM 4581 3637018 - 3637008 - f 77 -6.8 -4.48987 | CCCGCACAACGAAAA CCAG GTG CTGG CGATGCCCTCCGCTA TERM 4582 3637658 - 3637638 - g 88 -8.2 -4.59109 | opp_overlap 3637631 TACACCGCCGAAAAA CGCTGTGC CTGAT GCACCGCG TAATCCGTTCCGTGG yibQ 3637012 - 3637845 + | hypothetical protein TERM 4583 3639078 - 3639095 + T 93 -12.7 -3.83155 | opp_overlap 3639078 TATCCCCAGATAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC TERM 4584 3639095 - 3639078 - T 100 -12.7 -4.53303 | opp_overlap 3639078 TATCCCCAGATAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC tdh 3640130 - 3639105 - | L-threonine 3-dehydrogenase TERM 4585 3639953 - 3639970 + g 74 -2.7 -5.00884 | ATTCATGGCCTACGA CCATC GGCACCGG GATGG TTTTTTGCGACCACT kbl 3641336 - 3640140 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 4586 3641971 - 3641955 - g 81 -6.5 -4.77036 | opp_overlap 3641955 CGCGAGTACGAAAAA CCGTTGA ACG TCTACGG TTACTCAAAATTCCT TERM 4587 3642143 - 3642131 - g 73 -9.1 -3.65522 | opp_overlap 3642128 3642142 CACTCAGCTTAACAA CGGTG AAT CACCG AAGCTGTTTGAAGGT rfaD 3641550 - 3642482 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 4588 3642593 - 3642620 + G 76 -9.2 -3.7941 | gap 1, opp_overlap 3642590 3642593 CCAGGCGATAATCGA TGTGATGGCACCG GCA TGGTGCCGTC-CA TTATTATCGCGGATG rfaF 3642492 - 3643538 + | ADP-heptose:LPS heptosyltransferase II rfaC 3643542 - 3644522 + | ADP-heptose:LPS heptosyl transferase I TERM 4589 3644586 - 3644545 - T 76 -9 -3.68024 | opp_overlap 3644546 3644548 3644553 3644558, overlap 3644546 3644553 3644558 CCCCTTAATAGATAA TTTTGAAATAAAATCAGC CTCCTT GCTGATTTTATTTCATAT ATTCATTACTTATCT TERM 4590 3644546 - 3644585 + T 85 -12.5 -3.30798 | opp_overlap 3644545 3644546 3644553 3644558, overlap 3644548 3644553 3644558 CCCTTAATAGATAAT TTTGAAATAAAATCAGC CTCCTT GCTGATTTTATTTCATA TATTCATTACTTATC TERM 4591 3644585 - 3644546 - T 79 -12.5 -2.80493 | opp_overlap 3644546 3644548 3644553 3644558, overlap 3644545 3644553 3644558 CCCTTAATAGATAAT TTTGAAATAAAATCAGC CTCCTT GCTGATTTTATTTCATA TATTCATTACTTATC TERM 4592 3644548 - 3644583 + T 100 -15.1 -3.20896 | opp_overlap 3644546 3644545 3644553 3644558, overlap 3644546 3644553 3644558 CTTAATAGATAATTT TGAAATAAAATCAGC CTCCTT GCTGATTTTATTTCA TATATTCATTACTTA TERM 4593 3644553 - 3644578 + T 77 -9.2 -3.94936 | opp_overlap 3644546 3644545 3644553 3644558, overlap 3644548 3644546 3644558 TAGATAATTTTGAAA TAAAATCAGC CTCCTT GCTGATTTTA TTTCATATATTCATT TERM 4594 3644578 - 3644553 - T 72 -9.2 -3.63305 | opp_overlap 3644553 3644548 3644546 3644558, overlap 3644546 3644545 3644558 TAGATAATTTTGAAA TAAAATCAGC CTCCTT GCTGATTTTA TTTCATATATTCATT TERM 4595 3644558 - 3644573 + T 78 -4.7 -4.98061 | opp_overlap 3644558 3644553 3644546 3644545, overlap 3644553 3644548 3644546 AATTTTGAAATAAAA TCAGC CTCCTT GCTGA TTTTATTTCATATAT TERM 4596 3644573 - 3644558 - T 76 -4.7 -4.88405 | opp_overlap 3644553 3644548 3644546 3644558, overlap 3644553 3644546 3644545 AATTTTGAAATAAAA TCAGC CTCCTT GCTGA TTTTATTTCATATAT waaL 3645845 - 3644592 - | lipid A-core surface polymer ligase waaW 3647984 - 3646959 - | UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase TERM 4597 3647339 - 3647319 - G 74 -7.7 -4.05529 | ACAATGACCAAAGAA CAGAATATT TAA AATATCCTG ATCAAGGCATTTATA TERM 4598 3647483 - 3647498 + g 78 -5.4 -4.7497 | gap 1 GAAGTCCCTCTATAG CCAGACG CTT CG-CTGG TTTTTCCTGCATAAA TERM 4599 3647905 - 3647886 - G 90 -5 -5.33405 | overlap 3647887 CGCACCAAATAAAAA GTTACGGT CAAT ACCGTAAG CGATATTTAACACAC TERM 4600 3647904 - 3647887 - G 72 -8.5 -3.78958 | overlap 3647886 GCACCAAATAAAAAG TTACGGT CAAT ACCGTAA GCGATATTTAACACA waaY 3648702 - 3648010 - | lipopolysaccharide core biosynthesis protein waaJ 3649707 - 3648712 - | lipopolysaccharide 1,2-glucosyltransferase TERM 4601 3649767 - 3649749 - R 83 -4 -5.27938 | opp_overlap 3649728 ATCTTTAAATAAAAA TAATAAAT ATA ATTCATTA TCCCGTTAATTGGTT waaI 3650740 - 3649724 - | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase rfaP 3651553 - 3650756 - | RfaP TERM 4602 3650945 - 3650925 - G 77 -3.3 -5.10461 | TTCATTGAAGAAAAA TAAAGCCCT ATA AGATCTTTA TCGCGCCAACGACGT TERM 4603 3651486 - 3651472 - G 73 -4.2 -4.7373 | CCAGTTCACGAAAAA CCTCAC CCT GCAAGG TTTTAACTTCCTCAA rfaG 3652670 - 3651546 - | glucosyltransferase I waaQ 3653725 - 3652667 - | lipopolysaccharide core biosynthesis protein TERM 4604 3654759 - 3654734 - g 75 -5.3 -4.61482 | overlap 3654735 GGGCGCAAAAAATAA CCAGGTAACCG TTAC CGGTAGCCTGA AATTCGATATTTCTG TERM 4605 3655285 - 3655275 - g 70 -6.8 -4.08945 | opp_overlap 3655275 ACTACGCTTGCAAAA GAGG TTT CCTC TTTACTCACCGACGC kdtA 3654138 - 3655415 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 3655423 - 3655902 + | phosphopantetheine adenylyltransferase mutM 3656750 - 3655941 - | formamidopyrimidine-DNA glycosylase TERM 4606 3656833 - 3656798 - R 100 -18.6 -2.90194 | opp_overlap 3656801 3656808, overlap 3656801 3656808 ATGGGGGCAAGCAGA TAACAAAAAACCCCGC CGGA GCGAGGTTTTTTGTTA CATCAAAGCGAGAAT TERM 4607 3656830 - 3656801 - R 100 -15.9 -3.59946 | opp_overlap 3656801 3656808, overlap 3656798 3656808 GGGGCAAGCAGATAA CAAAAAACCCCGC CGGA GCGAGGTTTTTTG TTACATCAAAGCGAG TERM 4608 3656801 - 3656830 + r 85 -13.7 -3.05384 | opp_overlap 3656801 3656798 3656808, overlap 3656808 GGGGCAAGCAGATAA CAAAAAACCCCGC CGGA GCGAGGTTTTTTG TTACATCAAAGCGAG TERM 4609 3656808 - 3656823 + r 88 -6 -5.4833 | opp_overlap 3656808 3656801 3656798, overlap 3656801 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTTTTGTTACATCA TERM 4610 3656823 - 3656808 - R 100 -8.2 -5.60689 | opp_overlap 3656801 3656808, overlap 3656801 3656798 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTTTTGTTACATCA rpmG 3657015 - 3656848 - | 50S ribosomal protein L33 TERM 4611 3656892 - 3656916 + g 70 -3.6 -4.62872 | gap 1, opp_overlap 3656892 CGTGCTGGCGAACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGCTTAGT rpmB 3657272 - 3657036 - | 50S ribosomal protein L28 TERM 4612 3657476 - 3657463 - R 72 -6.7 -4.2074 | overlap 3657466 TCCCGAACAGACAAA GATCC CGAA GGATC GCGCATAGCGGGTTA radC 3658163 - 3657489 - | DNA repair protein RadC dfp 3658329 - 3659549 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 4613 3659859 - 3659887 + G 77 -3 -5.08601 | opp_overlap 3659863, overlap 3659864 3659874 GGACAGCTTCACCAT TCAACCTGGCGA ACGCA TCGCCCAGATGA TTTTTGTTCCGGTAG dut 3659530 - 3659985 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 4614 3660038 - 3660018 - f 76 -11.9 -2.50817 | overlap 3660017 3660015 3660013 AACGTCATAACATAG CCGCAAACA TTT CGTTTGCGG TCATAGCGTGGGTGC slmA 3660092 - 3660688 + | nucleoid occlusion protein TERM 4615 3660692 - 3660719 + T 90 -9.8 -4.41348 | opp_overlap 3660691 3660689 3660694, overlap 3660693 3660694 CAGTTGCAGTAATAT GACGCCGGATGA CTTT TCATCCGGCGAG TTTCTTTAAACGCCA TERM 4616 3660693 - 3660718 + T 83 -13.3 -3.24488 | opp_overlap 3660691 3660689 3660694, overlap 3660692 3660694 AGTTGCAGTAATATG ACGCCGGATGA CTTT TCATCCGGCGA GTTTCTTTAAACGCC TERM 4617 3660717 - 3660694 - T 100 -16.8 -2.77523 | opp_overlap 3660693 3660692 3660694, overlap 3660691 3660689 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC TERM 4618 3660694 - 3660717 + T 95 -16.8 -2.54371 | opp_overlap 3660694 3660691 3660689, overlap 3660693 3660692 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC pyrE 3661366 - 3660725 - | orotate phosphoribosyltransferase TERM 4619 3661424 - 3661407 - R 100 -11.3 -6.06529 | TACAGACAAAAAAAA GGCGACT CATC AGTCGCC TTAAAAATCAGTTTG rph 3662148 - 3661432 - | ribonuclease PH yicC 3662275 - 3663138 + | hypothetical protein TERM 4620 3663196 - 3663179 - gf 73 -9.8 -3.36415 | opp_overlap 3663179 CATAAATCACACCAA GCCCGC AACCCA GCGGGC TTTTTTGTTATCATG TERM 4621 3663179 - 3663196 + GF 100 -9.8 -5.58179 | opp_overlap 3663179 CATAAATCACACCAA GCCCGC AACCCA GCGGGC TTTTTTGTTATCATG TERM 4622 3663261 - 3663284 + GF 75 -9.7 -3.54408 | opp_overlap 3663260 3663259 TGGTGTACACAAAGG TGTACCCAA TGAGGT TTGGGTACA TTGCTTTGGGTACAC SBO_3647 3663101 - 3664588 + | putative integrase SBO_3648 3664684 - 3665532 + | hypothetical protein TERM 4623 3665552 - 3665528 - f 100 -8.7 -5.47218 | opp_overlap 3665530, overlap 3665529 3665540 CGGCAGGGAAAAAAA GGTGATAGTAA ATT TTACTATCACG ATAGTAAAAAATACG TERM 4624 3665551 - 3665529 - f 95 -12.2 -3.87608 | opp_overlap 3665530, overlap 3665528 3665540 GGCAGGGAAAAAAAG GTGATAGTAA ATT TTACTATCAC GATAGTAAAAAATAC TERM 4625 3665561 - 3665540 - f 71 -7.5 -3.85114 | opp_overlap 3665530, overlap 3665529 3665528 AAAGGTGATAGTAAA TTTTACTAT CACG ATAGTAAAA AATACGATCATTCCT SBO_3649 3665645 - 3665848 + | hypothetical protein TERM 4626 3665878 - 3665862 - f 100 -7.9 -5.48213 | opp_overlap 3665861 GATGGAAAAGAAAAA CCGCCCA TTA CAGGCGG CTAATTCAGATATTC TERM 4627 3666351 - 3666392 + G 73 -9.6 -3.61398 | gap 1, opp_overlap 3666343 3666361 3666364, overlap 3666361 AACCCAACGTTAACA CGGGAGTAATTAACGGCAA CGACT TTGCCGCTA-TTGTTCCCG TTATTGCCGGACGCA TERM 4628 3666579 - 3666550 - g 74 -7.8 -4.07885 | overlap 3666566 TATCCGTGTTGAAAA TTTGAGCACGCC AAAACG GGCGAGCGCAAA AACTCGCCAGCAAAT TERM 4629 3666589 - 3666566 - g 70 -5.9 -4.15565 | overlap 3666550 TTGAGCACGCCAAAA CGGGCGAGC GCAAAA ACTCGCCAG CAAATAGAGCATGAT SBO_3650 3666293 - 3667102 + | putative anti-repressor protein TERM 4630 3667585 - 3667565 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 4631 3667937 - 3667926 - g 77 -5.8 -4.63218 | opp_overlap 3667931 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_3651 3667506 - 3668345 + | IS911 ORF2 TERM 4632 3669022 - 3669044 + F 79 -10.6 -3.49232 | overlap 3669021 TTCCTTTATCGGGCT GGTGGGGTAA TAG TTACGCCACC TATTCTGTTTCGCAA SBO_3653 3669825 - 3670898 + | putative fimbrial protein pstS 3671146 - 3672186 + | phosphate transporter subunit pstC 3672273 - 3673232 + | phosphate transporter permease subunit pstA 3673232 - 3674122 + | phosphate transporter permease subunit pstB 3674213 - 3674986 + | phosphate transporter subunit phoU 3675001 - 3675726 + | transcriptional regulator PhoU TERM 4633 3675766 - 3675736 - T 93 -15 -2.85021 | opp_overlap 3675740, overlap 3675727 3675740 AAATAATTCACCAGA CAAATCCCAATAAC TTA ATTATTGGGATTTG TGGTAATGCTGCCAA TERM 4634 3675762 - 3675740 - T 83 -10 -4.09822 | opp_overlap 3675740, overlap 3675736 3675727 AATTCACCAGACAAA TCCCAATAAC TTA ATTATTGGGA TTTGTGGTAATGCTG TERM 4635 3675740 - 3675762 + T 77 -9.3 -4.00038 | opp_overlap 3675740 3675736 3675727 AATTCACCAGACAAA TCCCAATAA CTTAA TTATTGGGA TTTGTGGTAATGCTG SBO_3659 3675924 - 3675754 - | putative IS1 encoded protein insB 3676017 - 3676520 + | IS1 ORF2 TERM 4636 3676669 - 3676683 + G 83 -5.7 -5.06414 | TTACCACCTTCCTGA CGATG GTTTA CATCG TTTTTGTTAACCCAC yieG 3676548 - 3677885 + | putative membrane/transport protein TERM 4637 3677906 - 3677930 + T 93 -6.4 -5.65927 | gap 1, opp_overlap 3677892 3677906 ATAGCGCATTAAAAA CCCGCCATGCA TGAT TAC-TGGCGGG TTTTTTATTTAGATC TERM 4638 3677930 - 3677906 - T 88 -8.6 -4.74132 | gap 1, opp_overlap 3677906, overlap 3677892 ATAGCGCATTAAAAA CCCGCCATGCA TGAT TAC-TGGCGGG TTTTTTATTTAGATC yieF 3678505 - 3677939 - | hypothetical protein TERM 4639 3678113 - 3678103 - G 72 -6.8 -4.2828 | TTGCATCGAGGAAAA CCAG AAT CTGG CGCAGGTGATACTGA yieE 3679288 - 3678527 - | hypothetical protein yidZ 3680392 - 3679433 - | DNA-binding transcriptional regulator YidZ yidY 3681542 - 3680367 - | multidrug efflux system protein MdtL TERM 4640 3681664 - 3681642 - R 83 -13.5 -3.12351 | opp_overlap 3681645, overlap 3681645 TTTCCTGAGAGGCAA GAAGCCAGC GAATG GCTGGCTTC TTGAAGGATTTAGCC TERM 4641 3681661 - 3681645 - R 76 -9.4 -3.70773 | opp_overlap 3681645, overlap 3681642 CCTGAGAGGCAAGAA GCCAGC GAATG GCTGGC TTCTTGAAGGATTTA TERM 4642 3681645 - 3681661 + r 72 -9.4 -3.64283 | opp_overlap 3681642 3681645 CCTGAGAGGCAAGAA GCCAGC GAATG GCTGGC TTCTTGAAGGATTTA tnaB 3682921 - 3681674 - | tryptophan permease TnaB TERM 4643 3682818 - 3682808 - G 75 -4.6 -4.85599 | GGCACCCCAGAAAAA CCAG GCA CCGG CAAGATCAACAGGTA insB 3684184 - 3683681 - | IS1 ORF2 SBO_3669 3684277 - 3684450 + | putative IS1 encoded protein TERM 4644 3684721 - 3684686 - T 86 -12 -3.53712 | gap 1, opp_overlap 3684691 3684713, overlap 3684683 3684687 3684711 3684713 AGTGCTAACAATGAA GCGAAGCCGCA-TCTGA CAG TCAGAATACGGCTTCGT AAGCGCGGTTACTTA TERM 4645 3684720 - 3684687 - T 90 -15.5 -2.71745 | gap 1, opp_overlap 3684691 3684713, overlap 3684683 3684686 3684711 3684713 GTGCTAACAATGAAG CGAAGCCGCA-TCTGA CAG TCAGAATACGGCTTCG TAAGCGCGGTTACTT trmE 3686094 - 3684730 - | tRNA modification GTPase TrmE TERM 4646 3685072 - 3685086 + g 76 -7.8 -4.15044 | overlap 3685062 CATTCCCAGCGTTTC GCCGGT GAT ATCGGC TTTATTGCGCACCAC TERM 4647 3686156 - 3686175 + r 79 -9.2 -4.17048 | opp_overlap 3686157, overlap 3686157 CTACGAAAAGAAAAA AGGCGGTC AACT GACCGCCC TTATTTTAGCGAAAA TERM 4648 3686157 - 3686174 + r 80 -12.7 -3.09908 | opp_overlap 3686157, overlap 3686156 TACGAAAAGAAAAAA GGCGGTC AACT GACCGCC CTTATTTTAGCGAAA TERM 4649 3686174 - 3686157 - R 100 -12.7 -5.83211 | opp_overlap 3686157 3686156 TACGAAAAGAAAAAA GGCGGTC AACT GACCGCC CTTATTTTAGCGAAA yidC 3687846 - 3686200 - | putative inner membrane protein translocase component YidC yidD 3688106 - 3687849 - | hypothetical protein rnpA 3688429 - 3688070 - | ribonuclease P TERM 4650 3688245 - 3688265 + gr 74 -2.6 -5.06816 | gap 1 CGTTTAATCCGATTG CGTTC-ATG GGCG CGTCGAACG TTTTTCTTGGCGACT rpmH 3688586 - 3688446 - | 50S ribosomal protein L34 TERM 4651 3689522 - 3689503 - g 74 -10 -3.54129 | gap 1, opp_overlap 3689502 3689501, overlap 3689474 CACAGGTGGCGCAAA CGCAGC-CG CAA CGTGCTGCG CCTTCTACGCGCTCA TERM 4652 3689664 - 3689633 - g 80 -11.5 -3.30781 | overlap 3689628 3689637 TGAAGGTAAATCTAA CCAACTGGCGCGC GCGGCG GCTCGCCAGGTGG CGGATAACCCTGGCG TERM 4653 3689660 - 3689637 - g 71 -9.5 -3.43217 | overlap 3689633 3689628 GGTAAATCTAACCAA CTGGCGCGC GCGGCG GCTCGCCAG GTGGCGGATAACCCT dnaA 3689193 - 3690596 + | chromosomal replication initiation protein dnaN 3690601 - 3691701 + | DNA polymerase III subunit beta TERM 4654 3691834 - 3691853 + G 73 -9.2 -3.63968 | overlap 3691850 TGGAAGCCATCTATA CGCTCGGC CATG GTCGGGCG TTTCGCAGTTTGCAG recF 3691701 - 3692774 + | recombination protein F TERM 4655 3693213 - 3693190 - g 77 -6.6 -4.56597 | GCCCTGTCGCAAAAA CTGGAGCTGG TTAT CCAGCGCGAG GGTAAAATTCACCGT TERM 4656 3694035 - 3694021 - g 74 -10 -3.53012 | GGCCTGCCGGGCAAA CTGGCA GAC TGCCAG GAACGCGATCCGGCG TERM 4657 3695144 - 3695172 + G 72 -7.3 -4.15044 | overlap 3695145 3695148 TGTTCACCACGCTGA TGGGCGACGCCGT AGA ACCGCGTCGTGCG TTTATTGAAGAGAAC TERM 4658 3695148 - 3695168 + G 70 -11.1 -2.75825 | overlap 3695145 3695144 CACCACGCTGATGGG CGACGCCGT AGA ACCGCGTCG TGCGTTTATTGAAGA gyrB 3692803 - 3695217 + | DNA gyrase subunit B TERM 4659 3695374 - 3695354 - f 100 -16.9 -5.66684 | opp_overlap 3695354 GAAGCTATAAAAAAA GGGCGGAGA TCA TCTCCGCCC TTTTTATTTCTGCAA TERM 4660 3695354 - 3695374 + F 100 -16.9 -5.38054 | opp_overlap 3695354 GAAGCTATAAAAAAA GGGCGGAGA TCA TCTCCGCCC TTTTTATTTCTGCAA yidB 3695448 - 3695855 + | hypothetical protein TERM 4661 3695864 - 3695891 + F 76 -8.4 -4.19258 | opp_overlap 3695862 3695861 CCGCTAAGCAAATGG GGAGCATGCAAC CCGC GTTGCATCCCCC TTTTCCCTCGGGTGT TERM 4662 3696062 - 3696050 - g 72 -5.5 -4.56775 | ACCCGCCGTTAAAAA TGCGA TTG CCGCA GCTCGCGCCCGTGGC SBO_3680 3695970 - 3696299 + | hypothetical protein SBO_3681 3697646 - 3696417 - | IS1294 transposase TERM 4663 3696763 - 3696775 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 4664 3696859 - 3696873 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 4665 3697394 - 3697404 + g 79 -4.6 -5.00616 | overlap 3697389 3697388 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC TERM 4666 3698284 - 3698274 - g 70 -4.6 -4.4715 | GGTCAACGTACAAAA GCAG CAT CCGC GTGAATACAGCGGTA TERM 4667 3698564 - 3698531 - g 71 -10.9 -2.9732 | gap 1, opp_overlap 3698553, overlap 3698528 GTGGAACGGAAACCA CCCTGCCCG-CGCCAC CGC GCGGCGTCGTGCAGCG ACGTTTAACCTTTAC yidR 3697957 - 3698970 + | hypothetical protein yidQ 3699304 - 3698972 - | hypothetical protein ibpA 3699610 - 3700023 + | heat shock protein IbpA TERM 4668 3700410 - 3700381 - g 88 -2.1 -5.57729 | opp_overlap 3700381 3700394, overlap 3700404 AAAGAAGAGAAAAAA TGGCTGCATCA AGGGCTTA TGAATCAGCCA TTTAGCCTGAGCTTT ibpB 3700135 - 3700563 + | heat shock chaperone IbpB TERM 4669 3700579 - 3700599 + F 100 -14.7 -5.90231 | CTAGCTATTCTCTTT GCCCCGCCA TTC TGGTGGGGC TTTTTTTGTCTTTCT yidE 3700759 - 3702420 + | hypothetical protein TERM 4670 3702428 - 3702462 + T 75 -11.5 -3.10071 | gap 1, opp_overlap 3702449 TCGGTTAACTCTTTT CCGGGTGGAGTCGCCG TAAA TGGT-ACTCCACCTGG TATTCGCTGGCATTT yidP 3703133 - 3702417 - | putative transcriptional regulator TERM 4671 3703221 - 3703204 - H 87 -7.1 -5.10497 | opp_overlap 3703204 3703202 AATCGATTGAAAAAA CATCTTT TTTT AAAGATG TGTTCGATGCTGTGT TERM 4672 3704288 - 3704298 + G 75 -6.8 -4.43208 | CTCAAAAATCTTTGG TGCC GTG GGCA TTTCTTTAGCGATGT TERM 4673 3704735 - 3704724 - g 70 -5.8 -4.22041 | AAAGCCGAATACAAA GCCT CGCG AGGC CAAACCACCGCTGCA glvC 3703221 - 3705044 + | phosphotransferase system IIBC component TERM 4674 3706371 - 3706403 + F 87 -11.3 -3.90922 | overlap 3706373 3706374 GAGTTACGTTAATTG TGTGGACTGGCATCC GTT GGGTGCTGGTCCGTA TTCTTTAGCACGGCT TERM 4675 3706373 - 3706401 + F 86 -11.7 -3.54488 | overlap 3706371 3706374 GTTACGTTAATTGTG TGGACTGGCATCC GTT GGGTGCTGGTCCG TATTCTTTAGCACGG TERM 4676 3706374 - 3706400 + F 81 -13 -2.72371 | overlap 3706373 3706371 TTACGTTAATTGTGT GGACTGGCATCC GTT GGGTGCTGGTCC GTATTCTTTAGCACG TERM 4677 3706444 - 3706489 + F 95 -11.7 -4.11216 | opp_overlap 3706440 3706457, overlap 3706445 AACCAAATTTATCCG GTGCGCCGTAAAACCCCGTCC TTCA GGGCGGGGATATAAGGCGCGG TTTTCCACCTAACCA TERM 4678 3706445 - 3706488 + F 93 -15.2 -3.06515 | opp_overlap 3706440 3706457, overlap 3706444 ACCAAATTTATCCGG TGCGCCGTAAAACCCCGTCC TTCA GGGCGGGGATATAAGGCGCG GTTTTCCACCTAACC TERM 4679 3706476 - 3706457 - f 87 -10.6 -4.07568 | opp_overlap 3706445 3706444 CGGTGCGCCGTAAAA CCCCGTCC TTCA GGGCGGGG ATATAAGGCGCGGTT TERM 4680 3706891 - 3706901 + F 76 -4.6 -5.04249 | ACAATGCCTTCCACG CCGG ATA TCGG TTTCTTTTTTCACAG TERM 4681 3707282 - 3707251 - f 74 -5.9 -4.65895 | gap 1 TCCCCGATTCAAAAA GCGGGGA-CAGAAT GATGT ATTCCGCTACCCGC AGGGCGTTAAGCTCG TERM 4682 3707570 - 3707557 - f 71 -3.8 -4.83615 | overlap 3707566 CAGTTTTCAGAAAAA CCAG AAGAAG CTGG CGAGACTTCAGCGAC SBO_3691 3707750 - 3708025 + | IS629 ORF1 TERM 4683 3708345 - 3708333 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_3692 3708025 - 3708912 + | IS629 ORF2 TERM 4684 3709350 - 3709364 + F 72 -8.5 -3.70773 | CTCGTAACATTTTAG CGGCG GGGCA CGCCG TTCTTGCCTGTGGAG TERM 4685 3709445 - 3709428 - f 70 -9.9 -2.94888 | overlap 3709419 3709425 AACCCACCGAAATGA TTCAGGC GACA GCCTGAA CGTAGCAGGGATCCT yidH 3709615 - 3709962 + | hypothetical protein yidG 3709952 - 3710314 + | hypothetical protein TERM 4686 3710379 - 3710393 + G 73 -4.2 -4.86033 | opp_overlap 3710373 3710356 AGAGTACAAGGATGC TCTGCA ACC TGCCGA TTTTTATCACAATTT TERM 4687 3710681 - 3710715 + G 90 -7.7 -4.92757 | opp_overlap 3710681, overlap 3710664 ACGCTCGGCAGGAGA CGCCAGACAGCGTGC TTTGT GCGGGCTATCAGGCG TTTTATTCTTACTCC yidF 3710311 - 3710808 + | putative transcriptional regulator TERM 4688 3710864 - 3710821 - T 79 -10.3 -3.53444 | gap 2 TGACGTGCGCTTAAA CGGGCTGCCCCTGATGCGACA TCCG CGTCGC--CAGCGGCAGCCAG CACAGCACGATCAAC emrD 3712006 - 3710816 - | multidrug resistance protein D TERM 4689 3711252 - 3711233 - G 80 -5.6 -5.02074 | overlap 3711234 3711235 CCATGCGCCAAAAAA CGCTGCCG GAAT CGGCAGAA TAAACAAAATACTGA TERM 4690 3712166 - 3712147 - H 74 -3.5 -4.93288 | overlap 3712148 AATATGTAAACAAAA GCGGCAA TAAATG TTGCCGG GAGGGATTACGTGCG TERM 4691 3712396 - 3712375 - H 100 -17.3 -4.79451 | opp_overlap 3712375 ACGCTAAATATAAAA GGGGAGCGG TTAC CCGCTCCCC TTTGGTGCGACTTGA TERM 4692 3712375 - 3712396 + H 100 -17.3 -3.74747 | opp_overlap 3712375 ACGCTAAATATAAAA GGGGAGCGG TTAC CCGCTCCCC TTTGGTGCGACTTGA TERM 4693 3712922 - 3712937 + H 100 -8.2 -5.4833 | opp_overlap 3712922 AGGCGGCTGATGAAA CCTCGC TCCG GCGGGG TTTTTTGTTACCTGC ivbL 3713073 - 3713171 + | ilvB operon leader peptide TERM 4694 3713223 - 3713199 - f 89 -11.4 -4.16279 | gap 1, opp_overlap 3713199, overlap 3713214 CACACGATTCCAAAA CCCCGC-CGGC GCAA ACCGGGCGGGG TTTTTCGTTTAAGCA TERM 4695 3713199 - 3713223 + F 100 -10.7 -4.98531 | gap 1, opp_overlap 3713199 3713214 CACACGATTCCAAAA CCCCGC-CGG CGCAAA CCGGGCGGGG TTTTTCGTTTAAGCA ilvB 3713277 - 3714965 + | acetolactate synthase catalytic subunit TERM 4696 3715128 - 3715117 - g 74 -5.8 -4.45485 | AGGACAGCGACAAAA GCCA TATC TGGC TACTGGTCAATGACG ilvN 3714969 - 3715259 + | acetolactate synthase 1 regulatory subunit TERM 4697 3715282 - 3715306 + F 100 -12.2 -5.75342 | opp_overlap 3715282 3715281 3715279 AGGCTTGAACAACAT CGCGCTTATC GTTAA GGTAAGCGCG TTTTTTTTACCCGCC uhpA 3715333 - 3715923 + | DNA-binding transcriptional activator UhpA TERM 4698 3716987 - 3717001 + G 72 -7 -4.21631 | ATCGCTGGGCGTTTA CGACGC GGT GCGCCG TTTGTTGGGTCGGTT TERM 4699 3717133 - 3717164 + G 72 -8 -3.88498 | opp_overlap 3717135 3717149 3717150 GGCGAATCGATGAAT CAGCGTTAAGCG AAAACCAG CGCGTGACGCTG TTTCGTGTCTGCCAG uhpB 3715920 - 3717425 + | sensory histidine kinase UhpB TERM 4700 3718472 - 3718484 + G 73 -9.1 -3.65581 | TGCCAGCTACGTGAT GCAGG CAA CCTGC TTCTTCACCATTGGT uhpC 3717432 - 3718754 + | regulatory protein UhpC TERM 4701 3718931 - 3718909 - g 71 -9.1 -3.53012 | GCTGGCTTTCCTAAA CCAGGTTCG CAAGC CGACCCTGG ACCTTCCGCTCGAAG TERM 4702 3719459 - 3719473 + G 70 -6.4 -4.20368 | overlap 3719448 TACCTGTTCGATGGC CATGTC ATC GGCATG TTTATCTTCCCGTCG uhpT 3718892 - 3720283 + | sugar phosphate antiporter TERM 4703 3720302 - 3720320 + T 100 -13.1 -5.64873 | TAACTGGTGACTTTT GCCCGGC ATGAC GCCGGGC TTTTTTATTATTCCG yicP 3722094 - 3720328 - | cryptic adenine deaminase TERM 4704 3722073 - 3722095 + g 77 -2.8 -5.09245 | TAATGTGATGAAATT TATGGTTAAT GGA ATTATTCATA TTTTTCTCATTTTGA insB 3723213 - 3722710 - | IS1 ORF2 SBO_3707 3723306 - 3723560 + | putative IS1 encoded protein TERM 4705 3723559 - 3723537 - f 82 -5.6 -5.16237 | opp_overlap 3723551 AATGGGATTAAAAAA TACTGGCG TTATTGT CGCCAATA AAGACACGCTGGTGA TERM 4706 3724773 - 3724734 - g 71 -3.4 -4.85599 | gap 1, opp_overlap 3724719 CGGATTTTACAAAAA GCCCGTCTTGCCGCGCCGA TTA CCGATGCT-CAAGTCAGGC TGGCGCTGGGTTTTC yicN 3724407 - 3724886 + | hypothetical protein TERM 4707 3725130 - 3725120 - g 77 -8.2 -4.09864 | ATTTATTGCCGAAAA CCGC GGC GCGG ATGCCATCACCCGAC TERM 4708 3725295 - 3725311 + G 75 -5.1 -4.67607 | overlap 3725296 ACCGTGACCGCCTTT GTGGCAA TGT TTGCCAG TTTGTTTATTACCCA TERM 4709 3725518 - 3725553 + G 72 -6.8 -4.20368 | gap 1, overlap 3725514 3725545 TGGTGCCGCCGCGTA CGGTGCCGAAGG-CGCT GTC GGTGATCTTCGGCGCGG TTTCTATTGCGCTGG nepI 3725097 - 3726287 + | ribonucleoside transporter SBO_3710 3726621 - 3726328 - | putative transport protein nlpA 3726843 - 3727661 + | cytoplasmic membrane lipoprotein-28 yicL 3728587 - 3727688 - | putative permease transporter TERM 4710 3728659 - 3728673 + H 70 -2 -5.06414 | overlap 3728661 GCGAGGATGGCTCTG TTTGCG CCA CGCCGA TTTTTCTTAGCCCAG SBO_3713 3728974 - 3729276 + | IS600 ORF1 SBO_3714 3729312 - 3729650 + | IS600 ORF2 SBO_3715 3729756 - 3730130 + | IS600 ORF2 TERM 4711 3731005 - 3730992 - T 79 -3.1 -5.4505 | CCGGTGAAGAAAAAA CCTAC CATT ATAGG ACGGGCTTTCAGTTC SBO_3717 3731244 - 3731074 - | putative IS1 encoded protein insB 3731337 - 3731840 + | IS1 ORF2 TERM 4712 3733743 - 3733730 - g 78 -5.2 -4.83615 | GATGCGGCAGAAAAA GCGC AGAACA GCGC CACGATTAGCATCAT yicJ 3732545 - 3733927 + | putative transporter yicI 3733937 - 3736228 + | alpha-xylosidase YicI TERM 4713 3736270 - 3736242 - T 88 -14.5 -3.08312 | opp_overlap 3736240 3736239 AATCTATTGATGGAA TGCCGGGTACGTC TGA GTCGTACCCGGCG AGATTGATGTTTACT yicH 3737990 - 3736281 - | hypothetical protein TERM 4714 3738077 - 3738106 + r 81 -13 -2.63644 | gap 1, overlap 3738074 3738073 3738104 GTGAAAGAGGTGAGA CT-GCGGCGGTAA TTATC TTACCGCCGCCAG TGAATTACTGTTTTT TERM 4715 3738104 - 3738116 + r 73 -4.1 -4.91109 | opp_overlap 3738114, overlap 3738077 3738074 3738073 TTATCTTACCGCCGC CAGTG AAT TACTG TTTTTCTGGTGGGAA yicE 3739502 - 3738111 - | putative transport protein TERM 4716 3738234 - 3738221 - G 72 -6.7 -4.24002 | overlap 3738224 GGGCAAACTGCAAAA TCAGC GGCT GCTGA GACACGCCCAGACCA TERM 4717 3738569 - 3738581 + g 76 -9.1 -3.83026 | overlap 3738551 CGTTTGCCAGCACGC CGCCT TTC AGGCG TTTCATGTACAGCGG TERM 4718 3739456 - 3739473 + g 90 -9.9 -4.42386 | TCGCTGTTTTGAGTC TGCGCAA CCGG TTGCGCA TTTTCTGACTCGAGG TERM 4719 3739568 - 3739557 - H 73 -4.4 -4.80455 | GACCGAAAGAGAAAA GCAA ACGT TTGC CACATCCTCATCTAA TERM 4720 3740118 - 3740108 - g 72 -6.8 -4.18018 | opp_overlap 3740108 GTTGGTGATGCAAAA TGCC ATT GGCA TTGGTATGGCTAGCC gltS 3739782 - 3740987 + | glutamate transport TERM 4721 3740995 - 3741018 + T 83 -9.5 -4.14392 | opp_overlap 3740996, overlap 3740988 3740996 CCGGTTAACCGATGA AGCGGCGGT CTTCTC ACCGCCGCC TTTTACGCATTCGAG TERM 4722 3740996 - 3741017 + T 82 -13 -3.08314 | opp_overlap 3740996, overlap 3740988 3740995 CGGTTAACCGATGAA GCGGCGGT CTTCTC ACCGCCGC CTTTTACGCATTCGA TERM 4723 3741017 - 3740996 - T 83 -13 -3.21912 | opp_overlap 3740988 3740996 3740995 CGGTTAACCGATGAA GCGGCGGT CTTCTC ACCGCCGC CTTTTACGCATTCGA recG 3743102 - 3741021 - | ATP-dependent DNA helicase RecG TERM 4724 3741285 - 3741304 + g 90 -10 -4.36914 | overlap 3741275 TTGCAGGCGAATTTG CGCCGTTT TAGA AAGCGGCG TTTTGTAGAGCAGCA spoU 3743797 - 3743108 - | tRNA guanosine-2'-O-methyltransferase spoT 3745912 - 3743804 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 4725 3745356 - 3745374 + g 70 -5.2 -4.371 | opp_overlap 3745356, overlap 3745350 TACAGCGCCTCAAAA CCCAGCTC TTC GAGTTCGG TTTTAATGTGGTGGA rpoZ 3746206 - 3745931 - | DNA-directed RNA polymerase subunit omega gmk 3746884 - 3746261 - | guanylate kinase TERM 4726 3746829 - 3746817 - G 82 -9.1 -4.15044 | opp_overlap 3746817 3746813 TGGGTTTTTAATAAA GCCTG AAT CAGGC TGGATTTACCCGCGC SBO_3731 3748505 - 3748780 + | IS629 ORF1 TERM 4727 3749100 - 3749088 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_3732 3748780 - 3749667 + | IS629 ORF2 TERM 4728 3750114 - 3750089 - T 95 -11.9 -3.89354 | TGCGCAAATCAAGAA GCTGGGCAG TTGGCTGG CTGCCCAGC AGATCACAGGTTTTG yicG 3750805 - 3750134 - | hypothetical protein dinD 3751867 - 3751043 - | DNA-damage-inducible protein D TERM 4729 3751480 - 3751468 - G 75 -4.8 -4.83615 | opp_overlap 3751474 CATTTCTCAGAAAAA GACG CTTTT CGTC TTCACGAAGTTGCCT TERM 4730 3752050 - 3752026 - H 76 -4.2 -5.06414 | opp_overlap 3752026 TGCGGGGAAGAAAAA TGCCGCTC TGTTTGAGT GGGCGGCA TTTGTGAAGGCTGAA SBO_3735 3752301 - 3752660 + | hypothetical protein SBO_3736 3753195 - 3752653 - | hypothetical protein TERM 4731 3753710 - 3753724 + r 84 -8.5 -4.73108 | TATCCCGTTCTCTGA CGCCC CGTGC GGGCG TTTTGCTTTTATAGA SBO_3737 3754344 - 3753733 - | hypothetical protein SBO_3738 3756026 - 3755385 - | hypothetical protein TERM 4732 3755952 - 3755934 - G 81 -6.7 -4.59773 | opp_overlap 3755934 3755937 3755948, overlap 3755935 CTGTATGCCGAAAAA CCATGCG GCTAT CGCATGA TCTGCTTCATGTATT SBO_3739 3756471 - 3756037 - | putative single stranded DNA-binding protein TERM 4733 3756796 - 3756778 - H 72 -9 -3.60798 | ATCCTTATAAATCAA TCTCAATT ACA AATTGAGA CAACAAAGACAACCG TERM 4734 3757239 - 3757264 + H 100 -9.8 -5.61596 | opp_overlap 3757239 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 4735 3757264 - 3757239 - H 72 -9.1 -3.61398 | opp_overlap 3757239 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SBO_3740 3757254 - 3758600 + | IS4 orf TERM 4736 3758611 - 3758582 - f 89 -9.3 -4.59109 | overlap 3758584 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACCCCCCTTTGAGA TERM 4737 3758609 - 3758584 - f 100 -16.3 -3.90762 | overlap 3758582 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACCCCCCTTTGA TERM 4738 3758927 - 3758946 + G 71 -2.9 -4.75404 | gap 1 ATATCTGATGACCCG CTTC-TCC ACGCC GGAAGAAG TTTTTGGTCCCCTTT yieN 3758679 - 3760199 + | regulatory ATPase RavA TERM 4739 3760559 - 3760571 + G 75 -4.8 -4.83169 | AGCACAATAACTTCA GCGT TACAC ACGC TTTTTCTCCAGCGCT yieM 3760193 - 3761644 + | hypothetical protein asnA 3762641 - 3761649 - | asparagine synthetase AsnA TERM 4740 3762332 - 3762387 + g 100 -17.1 -2.75074 | gap 2 ACGGAGAAAGACGGT CTTCATCG-GGGCGAAGGGCT-TTCAT GTGC GTGTACAGCCCTTCGCCCGCGCTGAAG TCGTGTTGCCCTAAG TERM 4741 3762599 - 3762588 - G 70 -4.4 -4.46926 | CAGTTGACGAGAAAA GTGA GATT TCAC GAAGCTAATTTGGCG asnC 3762793 - 3763251 + | DNA-binding transcriptional regulator AsnC mioC 3763341 - 3763784 + | flavodoxin gidA 3764163 - 3766052 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 4742 3766091 - 3766064 - f 100 -18.6 -4.77759 | overlap 3766054 3766053 ATAACGCATTAAAAA TGCCTGGTAAGC ACCC GCTTACCAGGCA ACGCATCAAGAACAG gidB 3766116 - 3766739 + | glucose-inhibited division protein B TERM 4743 3766827 - 3766864 + F 86 -5.2 -5.52384 | gap 3, overlap 3766822 CTGGTTACATTTAAC GCCACGTTCACTCTT-TTG CAT CAACAAGA-T-AACGTGGC TTTTTTTGGTAAGCA TERM 4744 3767554 - 3767582 + G 70 -10.9 -2.7264 | opp_overlap 3767551 3767554 3767560, overlap 3767553 3767577 CAGGCGCATACACCA GCGAAAGGCCGGG TGG CCTGGACATTCGC ATTTGGCGAAGCTTT atpI 3767356 - 3767736 + | F0F1 ATP synthase subunit I TERM 4745 3768058 - 3768078 + F 77 -11.1 -3.17051 | overlap 3768056 TGATTGCTCCGCTGG CCCTGACGA TCT TCGTCTGGG TATTCCTGATGAACC atpE 3768606 - 3768845 + | F0F1 ATP synthase subunit C TERM 4746 3769006 - 3768978 - g 73 -11.8 -2.77899 | gap 1, overlap 3768975 GTTCTGCATGAAGTA CGTATGGCCGCCA TTAA TGGCAGCCAT-CG AAAAACGTCAAAAAG TERM 4747 3769033 - 3769012 - g 70 -3.7 -4.67353 | GCAGCCATCGAAAAA CGTCAAAAA GAAA TTGCTGACG GCCTTGCTTCCGCAG atpF 3768907 - 3769377 + | F0F1 ATP synthase subunit B TERM 4748 3769566 - 3769522 - g 72 -5.1 -4.50686 | gap 3, opp_overlap 3769535 3769558, overlap 3769523 3769558 CCAAAAACGAACAAA TGGCAGAGCTTCTCTCTGGCGC GCTT GCGCCAGA-A-ACGCTC-GCCG AGTCGTTTATCGCAG atpH 3769392 - 3769925 + | F0F1 ATP synthase subunit delta TERM 4749 3770500 - 3770464 - g 78 -8.7 -4.26188 | overlap 3770465 GTCAGACAGGTAAAA CCGCACTGGCTATCGAT GCC ATCATCAACCAGCGCGA TTCCGGTATCAAATG TERM 4750 3770499 - 3770465 - g 70 -10 -3.15231 | overlap 3770464 TCAGACAGGTAAAAC CGCACTGGCTATCGAT GCC ATCATCAACCAGCGCG ATTCCGGTATCAAAT atpA 3769938 - 3771479 + | F0F1 ATP synthase subunit alpha TERM 4751 3771672 - 3771705 + G 76 -12.5 -2.64243 | opp_overlap 3771672 GTCCTTATGCAGAAA CCATGCGCAAAGTGA TTGG TCACCTTGCACATGG TAATCTGGAATATAA TERM 4752 3771705 - 3771672 - g 100 -16.9 -3.91897 | opp_overlap 3771672 GTCCTTATGCAGAAA CCATGCGCAAAGTGA TTGG TCACCTTGCACATGG TAATCTGGAATATAA atpG 3771530 - 3772393 + | F0F1 ATP synthase subunit gamma TERM 4753 3772653 - 3772630 - g 76 -7.4 -4.18018 | GGTCTGGATGTAAAA GACCTCGAAC ACCC GATCGAAGTC CCGGTAGGTAAAGCG atpD 3772420 - 3773802 + | F0F1 ATP synthase subunit beta atpC 3773823 - 3774242 + | F0F1 ATP synthase subunit epsilon TERM 4754 3774266 - 3774285 + F 100 -10 -6.07627 | opp_overlap 3774266 3774265 TGAAAAGCACAAAAG CCAGTCTG GAAA CAGGCTGG TTTTTTTTTACGCGT TERM 4755 3775343 - 3775331 - g 84 -7.7 -4.62302 | GAACAGGCTGAAAAA CTGCT GTT AGCAG GCGTTATGCTGCGCG TERM 4756 3775355 - 3775368 + G 70 -5.2 -4.34402 | overlap 3775354 GCAGGCGTTATGCTG CGCG ATCCGG CGCG TTTTGATCTGCGCGG glmU 3774593 - 3775963 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 4757 3776936 - 3776922 - g 75 -4.9 -4.74801 | opp_overlap 3776925 GAACGCGATCAAAAA CACCC TTACT GGGCG CATCAGCCACGGTCA glmS 3776125 - 3777954 + | D-fructose-6-phosphate amidotransferase TERM 4758 3777993 - 3778022 + T 89 -9.3 -4.59109 | overlap 3777995 CTGCCGACCGGTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4759 3777995 - 3778020 + T 100 -16.3 -3.90762 | overlap 3777993 GCCGACCGGTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_3759 3778642 - 3778004 - | IS4 orf SBO_3760 3779351 - 3778761 - | IS4 orf TERM 4760 3779366 - 3779341 - G 100 -12 -5.61596 | opp_overlap 3779341 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG TGTTTCCGGA TTCTTACACAGCCAC TERM 4761 3779341 - 3779366 + g 85 -12 -3.61398 | opp_overlap 3779341 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG TGTTTCCGGA TTCTTACACAGCCAC TERM 4762 3779490 - 3779504 + H 79 -4.2 -5.24129 | overlap 3779489 ATTTTGCCGTTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 4763 3779691 - 3779714 + G 76 -3.8 -4.88736 | overlap 3779688 3779687 CAGTTTGGTTTTGGC GTTGAACGCG ATGC CGTGTTTGGC TTTTTATCGCTGATC TERM 4764 3780053 - 3780039 - g 70 -4.2 -4.68593 | TTTATGATTCAAAAA CATGGC ACG GCTATG GTCGGTAAGCTGTTT trkD 3779562 - 3781430 + | potassium transport protein Kup TERM 4765 3781438 - 3781462 + F 100 -9.3 -5.50723 | AAATCTAACGCCAGA CGCCTCCTT TCTCCAT AAGGGGGCG TTTTTGTTTTCATGG TERM 4766 3781955 - 3781985 + G 75 -11.3 -3.00907 | gap 1, overlap 3781949 3781964 3781983 AAAGTCAGGCGGTAA TTCGCA-GCGGAGA ATGT TCTCCGTATGCGAA TATCATTCTCTGTGC rbsD 3781597 - 3782016 + | D-ribose pyranase TERM 4767 3782089 - 3782078 - f 71 -7.2 -4.07568 | TTCCCGGGCGTAAAA GCCC TCTC GGGC GCTGCGTTAAATGTC rbsC 3783498 - 3784463 + | ribose ABC transporter permease protein TERM 4768 3785456 - 3785480 + F 90 -9.9 -4.38712 | opp_overlap 3785452 3785449, overlap 3785457 AAGAAAAGCAGGGCA CGCGCCACCCT AAC ACGGTGGCGCA TTTTATGGACATCCC TERM 4769 3785457 - 3785479 + F 83 -13.4 -3.22906 | opp_overlap 3785452 3785449, overlap 3785456 AGAAAAGCAGGGCAC GCGCCACCCT AAC ACGGTGGCGC ATTTTATGGACATCC rbsK 3785500 - 3786429 + | ribokinase TERM 4770 3786453 - 3786469 + G 90 -11.5 -3.91897 | opp_overlap 3786451, overlap 3786454 TACAATGAAAGATGT TGCCCGC CTG GCGGGCG TTTCTACCTCAACAG TERM 4771 3786454 - 3786468 + G 78 -12.8 -2.94924 | opp_overlap 3786451, overlap 3786453 ACAATGAAAGATGTT GCCCGC CTG GCGGGC GTTTCTACCTCAACA rbsR 3786433 - 3787425 + | transcriptional repressor RbsR yieO 3788818 - 3787391 - | putative transport protein TERM 4772 3787989 - 3787969 - G 72 -9.7 -3.37732 | overlap 3787973 3787983 ACATCAATGGCATAA GGAACGGTA CAC TACCGGTCC CCAGACGGGTTGCAA TERM 4773 3791626 - 3791613 - R 75 -6.7 -4.41177 | overlap 3791617 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 4774 3791852 - 3791828 - R 71 -8 -3.93061 | gap 1, opp_overlap 3791835 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 4775 3792406 - 3792394 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 4776 3794895 - 3794874 - R 74 -8.7 -3.91196 | opp_overlap 3794891 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 4777 3795267 - 3795248 - R 73 -10.8 -3.00946 | opp_overlap 3795248, overlap 3795245 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA TERM 4778 3795248 - 3795267 + r 100 -10.8 -6.02914 | opp_overlap 3795248 3795245 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA yifDA 3796175 - 3795336 - | transcriptional regulator HdfR TERM 4779 3795533 - 3795550 + g 72 -9.9 -3.31144 | CAATCTGTTGCTGTG CCAGTTC AGCA GAACTGG TTGTCAGAATGGGCA yifE 3796294 - 3796632 + | hypothetical protein TERM 4780 3796651 - 3796639 - T 85 -6.2 -5.15167 | opp_overlap 3796639, overlap 3796633 GACGATTAATAAAAA GGGC GAAAT GCCC TTTTTTTATGTCAGT TERM 4781 3796639 - 3796651 + T 93 -6.9 -5.72616 | opp_overlap 3796639 3796633 GACGATTAATAAAAA GGGCG AAA TGCCC TTTTTTTATGTCAGT yifB 3798207 - 3796795 - | putative 2-component regulator TERM 4782 3797549 - 3797561 + g 71 -10.5 -2.93089 | overlap 3797546 AGTAAAAGGTTGTGC CCGCC AGC GGCGG TAATTTCCAGTCCTC TERM 4783 3798030 - 3798045 + g 70 -6 -4.22535 | opp_overlap 3798022 TGATAATGGCGCTGC GCACGC GATC GCGAGC TTCTTTTACCGTTGT ilvL 3798529 - 3798627 + | ilvG operon leader peptide TERM 4784 3798677 - 3798650 - f 79 -11.2 -3.45366 | opp_overlap 3798652, overlap 3798635 3798652 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGACCTTAAA TERM 4785 3798652 - 3798675 + F 100 -13.8 -5.81032 | opp_overlap 3798650 3798652 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 4786 3798675 - 3798652 - f 86 -13.8 -3.29727 | opp_overlap 3798652, overlap 3798650 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 4787 3799570 - 3799581 + G 70 -5.8 -4.25283 | CGACTTGCTGATCGC CGTG GGTG CACG TTTTGATGACCGGGT TERM 4788 3800363 - 3800382 + G 73 -11.4 -2.72227 | opp_overlap 3800353 GAGAACGTCTGGCCG CTGGTGCC GCCT GGCGCCAG TAATTCAGAAATGTT ilvG 3798767 - 3800413 + | acetolactate synthase 2 catalytic subunit ilvM 3800410 - 3800673 + | acetolactate synthase 2 regulatory subunit TERM 4789 3800680 - 3800663 - f 72 -5.5 -4.3767 | overlap 3800665 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAATATAAAAATG ilvE 3800693 - 3801622 + | branched-chain amino acid aminotransferase TERM 4790 3801633 - 3801654 + F 86 -11.6 -3.53012 | opp_overlap 3801633 AATAAATACAAAAAA TGGGACGG CACGCA CCGTCCCA TTTACGAGACAGACA TERM 4791 3801654 - 3801633 - f 100 -12.3 -5.61913 | opp_overlap 3801633 AATAAATACAAAAAA TGGGACGGC ACGC ACCGTCCCA TTTACGAGACAGACA ilvD 3801687 - 3803537 + | dihydroxy-acid dehydratase TERM 4792 3803784 - 3803774 - g 79 -2.4 -5.30348 | ACGGAAGAACAAAAA GCGC ACG GCGT GATCACTGCTTCTGC TERM 4793 3803807 - 3803824 + G 71 -3.3 -4.77165 | gap 1, opp_overlap 3803809, overlap 3803809 GCTTCTGCGGGTAAC CACG-CGC AGG GCGTCGCG TTTTCTTCTGCGCGG ilvA 3803540 - 3805084 + | threonine dehydratase ilvY 3805971 - 3805081 - | DNA-binding transcriptional regulator IlvY TERM 4794 3805119 - 3805135 + g 95 -9.4 -4.82901 | opp_overlap 3805109 3805119 AGAACGCCTCAATCA GCGGCT CATGC AGCCGC TTTTTCTGCGCACAA TERM 4795 3805937 - 3805922 - G 83 -10.4 -4.07568 | opp_overlap 3805912 3805928 3805928 GCGCTGCGGCCAAAA TGGCGG CTTT CCGCCA GATGCAGGAAGGTTT TERM 4796 3806169 - 3806147 - g 70 -9.8 -3.19175 | CTTCAATACACTGAA CCTGCGCCAG CAG CTGGCACAGC TGGGCAAATGTCGCT ilvC 3806121 - 3807596 + | ketol-acid reductoisomerase TERM 4797 3807682 - 3807649 - T 90 -9.7 -4.45083 | gap 1, opp_overlap 3807652 3807653 3807656, overlap 3807651 3807652 3807656 GGGAGAGGGAGAAAA CACTCAAGGCCTTCTC CTG GAGAAGGCCTTGC-TA TTAGTTACGGTACAG TERM 4798 3807681 - 3807651 - T 93 -12.6 -3.83188 | opp_overlap 3807652 3807653 3807656, overlap 3807649 3807652 3807656 GAGAGGGAGAAAACA CTCAAGGCCTTCTC CTG GAGAAGGCCTTGCT ATTAGTTACGGTACA TERM 4799 3807652 - 3807680 + T 100 -16.1 -3.24825 | opp_overlap 3807651 3807649 3807652 3807656, overlap 3807653 3807656 AGAGGGAGAAAACAC TCAAGGCCTTCTC CTG GAGAAGGCCTTGC TATTAGTTACGGTAC TERM 4800 3807680 - 3807652 - T 93 -16.1 -2.8919 | opp_overlap 3807652 3807653 3807656, overlap 3807651 3807649 3807656 AGAGGGAGAAAACAC TCAAGGCCTTCTC CTG GAGAAGGCCTTGC TATTAGTTACGGTAC TERM 4801 3807653 - 3807679 + T 100 -19.6 -2.54574 | opp_overlap 3807652 3807651 3807649 3807656, overlap 3807652 3807656 GAGGGAGAAAACACT CAAGGCCTTCTC CTG GAGAAGGCCTTG CTATTAGTTACGGTA TERM 4802 3807656 - 3807676 + T 100 -15.5 -3.42147 | opp_overlap 3807652 3807651 3807649 3807656, overlap 3807653 3807652 GGAGAAAACACTCAA GGCCTTCTC CTG GAGAAGGCC TTGCTATTAGTTACG TERM 4803 3807676 - 3807656 - T 100 -15.5 -3.30972 | opp_overlap 3807656 3807653 3807652, overlap 3807652 3807651 3807649 GGAGAAAACACTCAA GGCCTTCTC CTG GAGAAGGCC TTGCTATTAGTTACG ppiC 3807964 - 3807683 - | peptidyl-prolyl cis-trans isomerase C TERM 4804 3808084 - 3808068 - H 100 -13.7 -4.18802 | ACATATATGGCAAAA GCCCGGA AAA TCCGGGC TTCGCAGGTCCCTCA SBO_3787 3808889 - 3809794 + | insertion element IS2 transposase InsD TERM 4805 3811703 - 3811676 - g 84 -10.6 -3.72592 | AATGCGCATGAAGAA CGTCAACCAACT GTTT AGCTGGATGACG GAGATGCTGGAAGGC TERM 4806 3812022 - 3812007 - g 81 -10.4 -3.90922 | ACGCTGTGTAAAGAA CGCCGT CAGT ACGGCG AGCTGGTGCGCCCGG rep 3810165 - 3812186 + | ATP-dependent DNA helicase Rep TERM 4807 3812223 - 3812192 - T 72 -10.8 -2.76911 | opp_overlap 3812191 3812191, overlap 3812191 3812188 3812201 AGGGAAATAATCAAG GCCGGAAAAGATGC GTCA GCATCGCATCCGGC ACTTACTCATTAATG TERM 4808 3812250 - 3812276 + T 76 -8.8 -3.73224 | gap 1 AATGCACTTCCAGCG GCCAGTGGACA TAGCTC TG-CCACTGGC TTTCCTGAGCAATAA gppA 3813717 - 3812233 - | guanosine pentaphosphate phosphohydrolase TERM 4809 3812912 - 3812895 - G 93 -9.9 -4.57569 | TCAGTTCGGTAAAAA TGGCGAT CAGG ATCGCCA GACCACTCGGGAACA TERM 4810 3813596 - 3813606 + g 81 -6.8 -4.65916 | AGGCCAGCAGCCAGA CGCA CTT TGCG TTTTATTCGCGTCAG rhlB 3815116 - 3813851 - | ATP-dependent RNA helicase RhlB TERM 4811 3814368 - 3814386 + g 100 -7.4 -5.5604 | overlap 3814369 CACTCTTCTTCGATC AGCGTTTG CAG CAAACGCA TTTTTTCTTCGTTAG TERM 4812 3814369 - 3814385 + g 86 -10.9 -3.91997 | overlap 3814368 ACTCTTCTTCGATCA GCGTTTG CAG CAAACGC ATTTTTTCTTCGTTA trxA 3815193 - 3815576 + | thioredoxin rhoL 3815717 - 3815818 + | putative Rho operon leader peptide TERM 4813 3816306 - 3816294 - g 70 -4.1 -4.63486 | ACGCCCGCAACAAAA TCCTC TTT GAGAA CTTAACCCCGCTGCA rho 3815903 - 3817162 + | transcription termination factor Rho TERM 4814 3817177 - 3817206 + G 95 -13.7 -3.38183 | opp_overlap 3817182, overlap 3817182 AATTTGTCTTATGCC AAAAACGCCACGT GTTT ACGTGGCGTTTTG CTTTTATATCTGTAA TERM 4815 3817182 - 3817201 + G 100 -13.6 -4.75518 | opp_overlap 3817182, overlap 3817177 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC TERM 4816 3817201 - 3817182 - g 100 -13.6 -4.62069 | opp_overlap 3817182 3817177 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC SBO_3794 3817172 - 3817390 + | hypothetical protein TERM 4817 3817422 - 3817438 + G 100 -8.1 -5.7946 | TTTACTGACAGTGAG TACTGAT CTC ATCAGTA TTTTTTTATTCACGA TERM 4818 3817843 - 3817881 + G 89 -14 -3.14881 | opp_overlap 3817851, overlap 3817829 3817851 TTTGCCGTCTGGGCG GCCATTAATGCGTTCAAC ATG GTTGATGGCATTGATGGC TTGCTGGGCGGGTTG TERM 4819 3818468 - 3818458 - g 70 -6.8 -4.11751 | overlap 3818448 ATTAAGCGCGTAAAA CGCA GAC TGCG TAGAAATCGTGGTGG rfe 3817402 - 3818505 + | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase TERM 4820 3818931 - 3818911 - g 72 -11.1 -3.02144 | opp_overlap 3818915 3818916, overlap 3818916 GGATGGTGGGCAACA GCAAAGCCG ATG CGGCGTTGC TGGATGAAATGATTA TERM 4821 3818926 - 3818916 - g 74 -8.2 -3.92324 | opp_overlap 3818915 3818916, overlap 3818911 GTGGGCAACAGCAAA GCCG ATG CGGC GTTGCTGGATGAAAT wzzE 3818514 - 3819563 + | lipopolysaccharide biosynthesis protein WzzE TERM 4822 3819574 - 3819599 + F 100 -21.9 -3.61517 | opp_overlap 3819563 3819570 3819569 3819567 AATAGCAACACTGCT GCGGCGAGCGC AAAG GCGCTCGCCGC TTATTCGAAGAGAAT TERM 4823 3820310 - 3820292 - g 78 -8.9 -4.15044 | GTGGTTTTGAAGAAA TCTGCCA CGCGT TGGCAGA CATTGCCACCACGCA wecB 3819664 - 3820749 + | UDP-N-acetyl glucosamine-2-epimerase TERM 4824 3820924 - 3820939 + G 76 -3.9 -5.00616 | CGAGCGTAGTAAAAA CTGCC GTAGAA GGCGG TTTTTTACGAGCGAG TERM 4825 3821401 - 3821416 + G 70 -5.4 -4.31692 | CCGAAAACAGCTTCC GCGATG TGAA TATCGC TTTTGCTAATGAATT wecC 3820746 - 3822008 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 4826 3822530 - 3822500 - g 74 -7.5 -4.07885 | gap 1, opp_overlap 3822526 3822527 TATTCCGCGTCAAAA GCCAGCAGCG-ACC ATCT GGTGCGCGCCTGGC TGCGGACCTACGGTC rffG 3822008 - 3823075 + | dTDP-glucose 4,6-dehydratase TERM 4827 3823346 - 3823360 + G 72 -7.8 -3.97947 | opp_overlap 3823333 CAGCCCAGCCCGGAC GGTCTG GTG CAGGCC TTTATCATCGGTGAA rffH 3823094 - 3823975 + | glucose-1-phosphate thymidylyltransferase TERM 4828 3824352 - 3824339 - g 76 -8.1 -4.19258 | opp_overlap 3824342 3824343 ACAGTGGATTGAAAA TGCCG TGCG CGGCA CCTTTGATCATCAAT wecD 3824082 - 3824627 + | TDP-fucosamine acetyltransferase TERM 4829 3824731 - 3824759 + G 81 -9.6 -4.07568 | gap 1, opp_overlap 3824758, overlap 3824758 GATGGCGGTTTTACC CGTCGCTGCCAGC AGTG GCTGG-AGCAACG TTTTGGCAGCGCCAA wecE 3824632 - 3825762 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 4830 3825878 - 3825898 + G 76 -11.1 -3.36289 | CCGGCGGGGCTTGGG CTGGCGGCA AAT TTCCGCCAG TTGATTACCGTGCTC wzxE 3825764 - 3827014 + | putative cytochrome TERM 4831 3827063 - 3827073 + G 72 -4.6 -4.65895 | overlap 3827035 CTCACCATAACCGAA CCGT TTT GCGG TTTTTCAATGACGCG TERM 4832 3827284 - 3827319 + G 85 -6.8 -4.8667 | overlap 3827314 AATCCCACACTGTGG CTGGCTCTGCTGAGTG GTGG CATTAAGCCCAGCCAG TTTTTCTGGCATATC TERM 4833 3827366 - 3827380 + G 71 -2.1 -5.02074 | ATGAGCTTTCCAGTG GCTTG AGATA TAAGC TTTTTTACCCGCTAC yifM 3827011 - 3828090 + | 4-alpha-L-fucosyltransferase TERM 4834 3828552 - 3828569 + G 71 -3.3 -4.80167 | overlap 3828555 AGTGAAGTCTCCGGC GTGGCGT TAAA ACGCTTC TTTTACTTTTTCATC TERM 4835 3828555 - 3828566 + G 74 -5.8 -4.47007 | overlap 3828552 GAAGTCTCCGGCGTG GCGT TAAA ACGC TTCTTTTACTTTTTC wecF 3828087 - 3829439 + | putative entero common antigen polymerase TERM 4836 3829722 - 3829687 - g 77 -6 -4.68593 | gap 1, opp_overlap 3829690, overlap 3829690 TTCAGTACGTAAAAA GTACCCGCAGGCGCAGG TTT CCCGCGT-TGCCGGTGC CGATCTCTGGGAAGA wecG 3829442 - 3830182 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4837 3830196 - 3830229 + F 75 -9.5 -3.5087 | opp_overlap 3830201, overlap 3830194 3830196 3830198 3830200 GATTTTCCTCTCTTT GTAAAGCGACGGAGT GGTC ACTCCGTCGCCTGTC TGCTTTTTTATTACA TERM 4838 3830196 - 3830232 + F 76 -2.5 -5.4505 | gap 3, opp_overlap 3830201, overlap 3830196 3830194 3830198 3830200 GATTTTCCTCTCTTT GTA-A-AG-CGACGGAGT GGTC ACTCCGTCGCCTGTCTGC TTTTTTATTACACAA TERM 4839 3830198 - 3830227 + F 77 -10.7 -3.30867 | opp_overlap 3830201, overlap 3830196 3830194 3830196 3830200 TTTTCCTCTCTTTGT AAAGCGACGGAGT GGTC ACTCCGTCGCCTG TCTGCTTTTTTATTA TERM 4840 3830200 - 3830225 + F 83 -13.3 -3.18764 | opp_overlap 3830201, overlap 3830198 3830196 3830194 3830196 TTCCTCTCTTTGTAA AGCGACGGAGT GGTC ACTCCGTCGCC TGTCTGCTTTTTTAT TERM 4841 3830224 - 3830201 - f 100 -16.8 -3.53012 | opp_overlap 3830200 3830198 3830196 3830194 3830196 TCCTCTCTTTGTAAA GCGACGGAGT GGTC ACTCCGTCGC CTGTCTGCTTTTTTA TERM 4842 3830344 - 3830332 - f 72 -9.1 -3.57039 | TACCCATAACGATAA CCGGT AAC ACCGG AAAGCATGCAAACAC TERM 4843 3830699 - 3830709 + G 77 -8.2 -4.06892 | opp_overlap 3830698 3830695, overlap 3830672 GATCTCAGAAATCAC CGCC GTT GGCG TTTATGTCCAGTTCT TERM 4844 3830865 - 3830845 - g 71 -10.5 -2.87051 | opp_overlap 3830845, overlap 3830844 TCGCGATGATCAAAG TCACCACGA TTA TCGTGATGA TTGTCATTGGCCTGG TERM 4845 3831336 - 3831320 - g 72 -5.7 -4.58395 | CGCACTGGCGAAAAA CCGTCAG TTA CCGGCGG CGATGGCGAAAGTTT yifK 3830373 - 3831758 + | putative transport protein YifK TERM 4846 3832306 - 3832321 + F 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT aslB 3832444 - 3833679 + | putative arylsulfatase regulator TERM 4847 3833704 - 3833682 - T 80 -6.9 -4.56133 | overlap 3833684 GGTGAATAAGTAAAA TAGCGGCCA TTTTG TGGCCGCCT GCGGTTGATTGCCGG TERM 4848 3833702 - 3833684 - T 95 -11.7 -3.88577 | overlap 3833682 TGAATAAGTAAAATA GCGGCCA TTTTG TGGCCGC CTGCGGTTGATTGCC TERM 4849 3834041 - 3834031 - T 72 -2.6 -4.91459 | opp_overlap 3834031 TAATAGTGACAAAAA TAAA TTA TTTA TTTATCCAGAAAATG TERM 4850 3834523 - 3834548 + T 100 -11.9 -5.64274 | ACAGACCTGTTTTAA CGCCTGCTC CGTAATAA GAGCAGGCG TTTTTTTATGCATCA hemY 3835799 - 3834603 - | putative protoheme IX biogenesis protein TERM 4851 3834840 - 3834854 + g 70 -4.2 -4.62302 | overlap 3834841 GCCGACGTTTTTGAT CTGCTG GCG CAGCAC TTTTTCCAGCTGTTC hemX 3837025 - 3835802 - | putative uroporphyrinogen III C-methyltransferase TERM 4852 3836771 - 3836782 + g 70 -3.6 -4.62336 | CAGCTCGGCTTTTTG GCTC TCCT GGGC TTTTTGCAATGCCGT hemD 3837787 - 3837047 - | uroporphyrinogen-III synthase hemC 3838746 - 3837784 - | porphobilinogen deaminase TERM 4853 3839611 - 3839588 - g 76 -7.4 -4.2828 | CCTGATTGATGAAAA CCGCTTCCGT CATA ATGAAAGCGG CAGCTTGGGGGGCGA TERM 4854 3841119 - 3841135 + G 71 -9.3 -3.53811 | CGCCTTTCCAGCACC CGCCAGG AAA CCGGGCG TTTCAAGGCGCTGCG TERM 4855 3841274 - 3841254 - g 75 -6.8 -4.30987 | overlap 3841250 ATTTCGCATAACAAA CTGCACGG CCTGT CAGTGCAG GTTGAAACCAATCAC cyaA 3839112 - 3841658 + | adenylate cyclase TERM 4856 3841692 - 3841663 - Tf 77 -11.5 -3.14211 | gap 1, opp_overlap 3841660 ATTTTTCGTGATGAA CGTGCCGGA-AAGC GAG GCTTATCCGGCATG CAATCTTAGCGGAAA cyaY 3842018 - 3841698 - | frataxin-like protein SBO_3818 3841809 - 3842294 + | hypothetical protein TERM 4857 3842614 - 3842582 - fH 70 -2.5 -4.96848 | GCCTGCAGATAAAAA TGCACCGCCGCCGAC CAA ACCGGTAGAGACGCA AACGCAATCCACGGT dapF 3842720 - 3843544 + | diaminopimelate epimerase TERM 4858 3843772 - 3843795 + G 81 -8.8 -4.40804 | opp_overlap 3843772 3843774, overlap 3843762 GCGCTGTTGATGGAA CAGGCTATCG CCAA CGAAGGCCTG TTTTATCGCCTACTC yigA 3843541 - 3844248 + | hypothetical protein TERM 4859 3844391 - 3844373 - g 70 -5.8 -4.18018 | overlap 3844359 TTTTGCCAGCGAAAA CGGCCTGC AAA GCTGGCAG CAATGTGATGTGACG TERM 4860 3844599 - 3844583 - g 72 -5.1 -4.57569 | opp_overlap 3844568 TCATCTGCCGAAAAA TATCGAC GTC GACGATA TGAATCGGCTGCTGG TERM 4861 3844829 - 3844860 + G 79 -5 -4.96848 | overlap 3844800 3844858 GCACTGGCTTGATTT GCGCGACCTGTTTG GTAG CGAAGACGACGCGC TTTTTCTGTCGAAAC xerC 3844245 - 3845141 + | site-specific tyrosine recombinase XerC yigB 3845141 - 3845857 + | flavin mononucleotide phosphatase TERM 4862 3846008 - 3845980 - g 83 -10.1 -4.05714 | opp_overlap 3845991, overlap 3845982 AGCCTTAATGACAAA CAGCGCGAAGCGG TGG CCGCGCCACGCAG CAACCTTCTGGTGCT TERM 4863 3846006 - 3845982 - g 85 -11.3 -3.6217 | opp_overlap 3845991, overlap 3845980 CCTTAATGACAAACA GCGCGAAGCGG TGG CCGCGCCACGC AGCAACCTTCTGGTG TERM 4864 3845991 - 3846013 + G 71 -9 -3.44051 | opp_overlap 3845982 3845980 CAAACAGCGCGAAGC GGTGGCCGCG CCA CGCAGCAACC TTCTGGTGCTGGCGG uvrD 3845941 - 3848103 + | DNA-dependent helicase II TERM 4865 3848099 - 3848147 + T 90 -13.8 -3.34192 | overlap 3848100 CCCGGTTGGAGACGG TGTGACGTTGCGGGATGCGGTG CGCCA CACCGCATTCCGCATCAGCACC TTACTTAGCGCACTT TERM 4866 3848100 - 3848146 + T 100 -17.3 -2.60194 | overlap 3848099 CCGGTTGGAGACGGT GTGACGTTGCGGGATGCGGTG CGCCA CACCGCATTCCGCATCAGCAC CTTACTTAGCGCACT SBO_3825 3849050 - 3848148 - | hypothetical protein TERM 4867 3848354 - 3848380 + g 72 -8 -3.95153 | opp_overlap 3848361, overlap 3848359 AACCTTCGGAAATGG TCACACACAACG TGT CGTTGAGTTTGA TTTCTGCCTGATTCA TERM 4868 3848359 - 3848375 + g 70 -6.5 -4.15066 | opp_overlap 3848361, overlap 3848354 TCGGAAATGGTCACA CACAACG TGT CGTTGAG TTTGATTTCTGCCTG TERM 4869 3849030 - 3849040 + g 100 -3.2 -5.85011 | opp_overlap 3849015 CGTTAATAAAAATAA CGTT GCG AGCG TTTTTTTCATTTTTG TERM 4870 3849576 - 3849605 + r 89 -9.3 -4.59109 | overlap 3849578 CCACCTTCTGCTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4871 3849578 - 3849603 + r 100 -16.3 -3.90762 | overlap 3849576 ACCTTCTGCTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_3826 3850225 - 3849587 - | IS4 orf SBO_3827 3850934 - 3850344 - | IS4 orf TERM 4872 3850949 - 3850924 - G 100 -9.8 -5.61596 | opp_overlap 3850924 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4873 3850924 - 3850949 + g 73 -9.1 -3.61398 | opp_overlap 3850924 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC corA 3851706 - 3852656 + | magnesium/nickel/cobalt transporter CorA insB 3852910 - 3853413 + | IS1 ORF2 rarD 3854312 - 3853407 - | hypothetical protein TERM 4874 3853503 - 3853491 - G 72 -5.5 -4.46112 | opp_overlap 3853491 3853494 CGCCACCCAAATAAA GGCGA AGG TCACC ATCTTATCGGCACCC TERM 4875 3853510 - 3853520 + g 72 -4.6 -4.59773 | AAGGTCACCATCTTA TCGG CAC CCGG TTTTTCACCATAAAA TERM 4876 3854208 - 3854175 - G 85 -3.1 -5.40464 | gap 1, overlap 3854183 CACCATAAAGAAAAA CGACCAGATCACG-CG ATG CGTCAGGATCTCATCG GCGGGCACGTAGTAA TERM 4877 3854298 - 3854263 - G 74 -3.2 -4.89521 | gap 1, opp_overlap 3854265 3854266, overlap 3854266 ATACCCCAAATAAAA TAAGCGGCAAGAGCG AGTAATA CGC-CCTGCCGCGTT TGTTTTGCATCCATC TERM 4878 3854265 - 3854296 + g 70 -3.6 -4.68908 | gap 1, opp_overlap 3854263 3854266, overlap 3854266 ACCCCAAATAAAATA AGCGGCAAGAGCG AGTAATA CGCCCT-GCCGCG TTTGTTTTGCATCCA TERM 4879 3854295 - 3854266 - G 90 -9.3 -4.54026 | gap 1, opp_overlap 3854265 3854266, overlap 3854263 CCCCAAATAAAATAA GCGGCAAGAGCG AGTAATA CGC-CCTGCCGC GTTTGTTTTGCATCC TERM 4880 3854341 - 3854353 + r 72 -4.8 -4.67943 | opp_overlap 3854341, overlap 3854334 3854336 TTTTAATTGGTAACA GCAG TTTAC CTGC TTTTATGTCTTCAAC yigI 3854825 - 3854364 - | hypothetical protein pldA 3854990 - 3855859 + | phospholipase A TERM 4881 3855943 - 3855964 + F 100 -12.3 -5.27335 | overlap 3855950 TTGCAGTTTCTCGCG CAGGCGCTG AAAA TAGCGCCTG TTTTTATTTCAGGCA TERM 4882 3857622 - 3857606 - g 71 -9.5 -3.5394 | opp_overlap 3857605 AAACTGTTCGCCAAA TTACGCA AAC TGCGTAA ATCGATTGCCGATGA recQ 3855986 - 3857821 + | ATP-dependent DNA helicase RecQ yigJ 3858137 - 3858505 + | hypothetical protein TERM 4883 3858526 - 3858562 + T 89 -8.8 -4.58395 | gap 1, opp_overlap 3858529 3858538, overlap 3858529 GACGCGTCTTCAGAG TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA TTTTTCACGCATGCC TERM 4884 3858529 - 3858558 + T 79 -12.1 -3.23855 | opp_overlap 3858529 3858538, overlap 3858526 GCGTCTTCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA TERM 4885 3858558 - 3858529 - T 90 -14.3 -3.25823 | opp_overlap 3858529 3858526, overlap 3858538 GCGTCTTCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA yigK 3858983 - 3858567 - | hypothetical protein TERM 4886 3860253 - 3860268 + G 74 -3.2 -5.00616 | opp_overlap 3860233 3860231 TGCGCTCAGTCGCGC TCCACG CCAT CGTTGA TTTTTTCAACAGGCA pldB 3859298 - 3860320 + | lysophospholipase L2 yigL 3860328 - 3861128 + | putative sugar phosphatase metR 3862944 - 3861991 - | MetR yigM 3861204 - 3862103 + | hypothetical protein TERM 4887 3862909 - 3862919 + gF 74 -6.8 -4.23434 | overlap 3862905 GCCGCAGTTCCGCAA CGCT TGT AGCG TTTTCAGATGTTTTA TERM 4888 3863357 - 3863335 - g 70 -4.1 -4.71426 | gap 1, opp_overlap 3863355, overlap 3863339 CTGGGATCAACAAAA GCAAGCGGGT ATCG ACCTGCT-GC CGGTGGGCGATTTTG TERM 4889 3864250 - 3864236 - g 78 -5.7 -4.82901 | TTCGCCTTACAAAAA TGCCA TGAAC TGGCA CTGCTGCGCGATGCG TERM 4890 3865393 - 3865368 - g 74 -7.5 -4.07687 | overlap 3865386 ACTGTGGCCTGAAAA CGCGCGGCT GGCCAGAA ACCCGCGCG GCACTGGCGAACATG metE 3863180 - 3865441 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 4891 3865587 - 3865558 - f 74 -10.7 -3.28712 | TTGTTGGCCGGACAA GGCGTTCACGCCG CATC CGGCATGAACAAC GCGCACTTTGCCAAT TERM 4892 3865610 - 3865631 + F 93 -10.2 -4.39166 | opp_overlap 3865606, overlap 3865597 TTGCCAATAATCTGA TGGCTTCC ATCACC GGAAGCCA TTTTGCTATCTGCGC SBO_3842 3866449 - 3866724 + | IS629 ORF1 TERM 4893 3867044 - 3867032 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_3843 3866724 - 3867611 + | IS629 ORF2 SBO_3844 3869671 - 3868793 - | putative enzyme udp 3869867 - 3870628 + | uridine phosphorylase TERM 4894 3870648 - 3870664 + F 100 -9.4 -4.98672 | CTTCTCCTGTCTGAA GGCCGA CGCGT TCGGCC TTTTGTATTTTTGCG TERM 4895 3871384 - 3871370 - g 85 -7.1 -4.78839 | AAGGCGACAATAAAA CCCAG GGCAA CTGGG GCGAGGTAGTATTGA yigN 3870769 - 3872196 + | DNA recombination protein RmuC ubiE 3872291 - 3873046 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4896 3873206 - 3873228 + G 76 -10.6 -3.29471 | overlap 3873207 TTCGACGTCATTGAT TCTGGTGTTC AGC GAACGCCAGG TTGATGTACTGGGCG TERM 4897 3873207 - 3873227 + G 73 -11.9 -2.57468 | overlap 3873206 TCGACGTCATTGATT CTGGTGTTC AGC GAACGCCAG GTTGATGTACTGGGC yigP 3873060 - 3873665 + | hypothetical protein TERM 4898 3873781 - 3873744 - g 83 -9.9 -4.1196 | gap 1, opp_overlap 3873744 3873747 AACTGATCCCCAAAA TGCGTATCACCCT-GCCG CTA CGGCTATGGCGATACTCA TTATTCTGGATGCCA ubiB 3873662 - 3875302 + | putative ubiquinone biosynthesis protein UbiB tatA 3875339 - 3875650 + | twin argininte translocase protein A TERM 4899 3875983 - 3875962 - g 70 -5 -4.45517 | AAACGATCCAGAAAA GGCGAGCG ATGAAG CGCACACC ATCCATAACCCGGTG SBO_3851 3875654 - 3876169 + | sec-independent translocase TERM 4900 3876510 - 3876522 + G 70 -4.8 -4.53303 | overlap 3876501 GCCGCTGCTGGTTTC CAGC TCTCT GCTG TTTTATATCGGCATG yigU 3876172 - 3876948 + | TatABCE protein translocation system subunit TERM 4901 3876975 - 3876950 - f 86 -8.9 -4.49364 | opp_overlap 3876952 3876955, overlap 3876951 3876952 3876955 AAACTGAAGAATAAA TTCAACCGCCC GTCA GGGCGGTTGTC ATATGGAGTACAGGA TERM 4902 3876974 - 3876951 - f 81 -12.4 -3.27992 | opp_overlap 3876952 3876955, overlap 3876950 3876952 3876955 AACTGAAGAATAAAT TCAACCGCCC GTCA GGGCGGTTGT CATATGGAGTACAGG TERM 4903 3876973 - 3876952 - f 90 -15.9 -2.5571 | opp_overlap 3876952 3876955, overlap 3876951 3876950 3876955 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 4904 3876952 - 3876973 + F 90 -15.9 -2.63596 | opp_overlap 3876952 3876951 3876950 3876955, overlap 3876955 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 4905 3876970 - 3876955 - f 82 -11.8 -3.41554 | opp_overlap 3876952 3876955, overlap 3876952 3876951 3876950 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA TERM 4906 3876955 - 3876970 + F 82 -11.8 -3.47078 | opp_overlap 3876955 3876952 3876951 3876950, overlap 3876952 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA tatD 3876978 - 3877772 + | DNase TatD rfaH 3878257 - 3877769 - | transcriptional activator RfaH TERM 4907 3877932 - 3877910 - G 70 -10.7 -2.76696 | opp_overlap 3877912 3877929, overlap 3877909 3877912 GCCTTCGGTAATAAT CACCTTATC ACCCG GATAAGGTG TTGCCGGATCGACAA TERM 4908 3878836 - 3878824 - g 85 -3.3 -5.4505 | overlap 3878825 CCTGCCAACAAAAAA TCGTC TCT GGCGA TGACGTCGATCTCAA TERM 4909 3879054 - 3879072 + G 70 -6.6 -4.04206 | TGGTGTGCGGCGCAT CCGGGCGA ACG TTTCCCGG TTTCTGTGGCGCTGG yigC 3878424 - 3879917 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 4910 3879922 - 3879910 - f 72 -6.2 -4.24123 | opp_overlap 3879909 3879905 3879910 TTAACAACGGTAAAA GCGC CTGAT GCGC GTTTGTTTTGCCCTA TERM 4911 3880023 - 3880046 + G 79 -3.7 -5.14626 | overlap 3880025 GATACCGTATATCGT GTCCGCATC GTGCCA GACGCGGCC TTTTCTTTTCGTGCT fre 3879963 - 3880664 + | FMN reductase TERM 4912 3880695 - 3880677 - T 100 -9.5 -5.76633 | TGAGATATAAAAAAA CCCGCCC CTGAC AGGCGGG AAGAACGGCAACTAA TERM 4913 3880764 - 3880797 + T 76 -11.7 -2.56596 | overlap 3880732 3880771 3880774 GCAATCGGTGCACGA TGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACATTGGTGCAGGA fadA 3882019 - 3880856 - | 3-ketoacyl-CoA thiolase TERM 4914 3884051 - 3884031 - H 74 -3.9 -4.91459 | overlap 3884032 GAACAGGGACAAAAA TTCGGTGAT ATC AGCACCGAC GATAAAGGCTGCTTT TERM 4915 3884364 - 3884342 - H 72 -4.8 -4.60648 | AAAAGATTAAAGAAA TGCCGATC TGATCAC GCTCGGCA GAAATCACGCTCTGG pepQ 3884436 - 3885767 + | proline dipeptidase TERM 4916 3886051 - 3886082 + G 77 -11.6 -3.23853 | opp_overlap 3886050 3886053, overlap 3886050 CGGCATCGGGGAAAT TACCGCTGTGGTAG TGCG CTACTACGGCGGCA TATTGCTTGGCACCG yigZ 3885764 - 3886381 + | hypothetical protein TERM 4917 3887597 - 3887616 + G 75 -5 -4.84761 | CACTGCCGGAACGTA TCCTCGAA GCCG TTTGGGGA TTTTTCTCCGCCTAT trkH 3886420 - 3887871 + | potassium transporter TERM 4918 3888042 - 3888023 - g 70 -6.4 -4.22338 | opp_overlap 3888026, overlap 3888026 ACCACAATGGGAAAA CTATGACC GTGT GGTCATTG GTGCTTCTATTCGCT hemG 3887883 - 3888428 + | protoporphyrinogen oxidase TERM 4919 3890671 - 3890634 - T 93 -6.3 -5.68438 | opp_overlap 3890636 3890664, overlap 3890636 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 4920 3890669 - 3890636 - T 86 -8.9 -4.47052 | opp_overlap 3890636 3890664, overlap 3890634 ATTAAATAAAAAATA CTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 4921 3890636 - 3890669 + T 75 -6.7 -4.49756 | opp_overlap 3890636 3890634, overlap 3890664 ATTAAATAAAAAATA CTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 4922 3890734 - 3890710 - T 71 -8 -3.93061 | gap 1, opp_overlap 3890717 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 4923 3891288 - 3891276 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 4924 3893777 - 3893756 - T 74 -8.7 -3.91196 | opp_overlap 3893773 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 4925 3893945 - 3893924 - T 82 -11.5 -3.58914 | opp_overlap 3893924 TCAAATTAAGCAGAA GGCCCGGTC GGAA GACTGGGCC TTTTTGCGTTGGTGC TERM 4926 3893924 - 3893945 + T 100 -13.7 -4.7629 | opp_overlap 3893924 TCAAATTAAGCAGAA GGCCCGGTC GGAA GACTGGGCC TTTTTGCGTTGGTGC mobB 3894524 - 3894012 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 4927 3894312 - 3894337 + g 100 -14.1 -3.85698 | opp_overlap 3894309, overlap 3894327 3894333 TTCCGTCATCAAGGC CCATCGTTGCT GGCT GGCAACGATGG TTTGTGCCGCGCCAG TERM 4928 3894516 - 3894526 + g 71 -3.2 -4.7373 | GGCAAAGGCGAGTAA CGGT ATC ATCG TTTTTCCTGCCATCG mobA 3895105 - 3894521 - | molybdopterin-guanine dinucleotide biosynthesis protein A yihD 3895175 - 3895444 + | hypothetical protein TERM 4929 3896478 - 3896466 - g 72 -6.3 -4.31043 | ATAGAACAGGCAAAA GTTCT ACA AGAAC CCCCTTTACAATTAA yihE 3895521 - 3896507 + | serine/threonine protein kinase dsbA 3896524 - 3897150 + | periplasmic protein disulfide isomerase I TERM 4930 3897164 - 3897148 - f 75 -3.1 -5.24129 | overlap 3897156 CTGTCCGAGAAAAAA TAATTCA ATG TAAATTA CATAAAGCCCGTGAA TERM 4931 3897171 - 3897190 + F 100 -13.6 -6.01369 | opp_overlap 3897171 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 4932 3897190 - 3897171 - f 100 -13.6 -4.17516 | opp_overlap 3897171 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 4933 3897488 - 3897478 - f 76 -4 -4.91712 | opp_overlap 3897478 GTTAAGTTATAAAAA CTTT GAC AAAG GCTTTTTTAATTCCC TERM 4934 3898764 - 3898744 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 4935 3899116 - 3899105 - g 77 -5.8 -4.63218 | opp_overlap 3899110 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_3874 3898685 - 3899524 + | IS911 ORF2 TERM 4936 3900026 - 3899990 - T 72 -6.7 -4.25104 | gap 1, opp_overlap 3899992, overlap 3899992 3899993 TTTTGTTCATTAAAA TACTCACTCGCCTCTG CTCATT CAGAGGCGAGCAAA-A TTTACTTGTCCTGCC TERM 4937 3900025 - 3899992 - T 93 -11.8 -3.73042 | opp_overlap 3899992, overlap 3899990 3899993 TTGTTCATTAAAATA CTCACTCGCCTCTG CTCATT CAGAGGCGAGCAAA ATTTACTTGTCCTGC TERM 4938 3900024 - 3899993 - T 82 -13.1 -2.83504 | opp_overlap 3899992, overlap 3899992 3899990 TGTTCATTAAAATAC TCACTCGCCTCTG CTCATT CAGAGGCGAGCAA AATTTACTTGTCCTG yihG 3900960 - 3900028 - | putative endonuclease TERM 4939 3900534 - 3900497 - G 70 -6.3 -4.22554 | gap 1 TGACGTAATAAATAA GCGCGGGA-ATAACGCTT CAT AAACGGCATATCCAGCGC CCAGCACGCCAGGCC TERM 4940 3900803 - 3900788 - G 77 -3.2 -5.10601 | overlap 3900789 ATAAAATCACAAAAA CGCGAA ACCT TTCGCC AAATGACTGGCACAG TERM 4941 3900890 - 3900870 - G 100 -6.9 -5.4833 | overlap 3900873 GGACGGAACAAAAAA TAGTGACCA AAA TGGTCAATA CGATACTCAGCAAAA TERM 4942 3900989 - 3900979 - H 74 -8.2 -3.9122 | overlap 3900966 CAGTGCGCTAAAGAA GCGC AAG GCGC AGATTTTAGCAGAAA TERM 4943 3901718 - 3901705 - g 70 -3.7 -4.66833 | overlap 3901706 CGCGAAGCCGAAAAA GCCGG GCGT CCGGT GCTGATCAGCACTGG TERM 4944 3901952 - 3901922 - g 95 -9.6 -5.00616 | GCGTCGGTGAAAAAA CCGCGCAGGCATTG CTG CAAGGTCTGGGCGG GCTGGATACGCTGTA TERM 4945 3902251 - 3902233 - g 70 -5.8 -4.17089 | opp_overlap 3902248 GCCAAAGGGGCAAAA CCAGCCGC GAA GCCGCAGG AAACCAGTGTTGCAG TERM 4946 3903139 - 3903128 - g 81 -7.2 -4.64334 | AACCGCTGAAGAAAA CGCC GGGT GGCG CGCCGTCAACGTCGG polA 3901324 - 3904110 + | DNA polymerase I TERM 4947 3904334 - 3904359 + T 100 -19.1 -5.4505 | opp_overlap 3904327 GCTGAATATTTTAGC CGCCCCAGTCA GTAA TGACTGGGGCG TTTTTTATTGGGCGA yihA 3905124 - 3904492 - | GTPase EngB TERM 4948 3905597 - 3905642 + H 100 -19.3 -3.69341 | opp_overlap 3905609, overlap 3905609 CGTTAAGGGTTATGA GTCAGGAAAAAAGGCGACAGA GTAA TCTGTCGCCTTTTTTCTTTGC TTGCTTTCTGTTAGA TERM 4949 3905630 - 3905609 - H 100 -14.5 -5.1675 | opp_overlap 3905597 3905609 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG TERM 4950 3905609 - 3905630 + H 100 -14.5 -5.72053 | opp_overlap 3905609, overlap 3905597 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG yihI 3905706 - 3906215 + | hypothetical protein TERM 4951 3906378 - 3906321 - f 100 -14.2 -4.25104 | gap 3, overlap 3906299 3906297 3906294 TCGCGGCGACCAAAA GTGGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCCGC CAGAGACGCCATCGG hemN 3906405 - 3907778 + | coproporphyrinogen III oxidase TERM 4952 3907823 - 3907787 - T 74 -10.3 -3.19026 | gap 1, opp_overlap 3907783 GATTTGAATAGTGAA TGGCGC-TTCGTTTAC AAAGTA GAAAACGAAAGCGCCA TCAATGTGCTGAGAA glnG 3909598 - 3908189 - | nitrogen regulation protein NR(I) glnL 3910659 - 3909610 - | nitrogen regulation protein NR(II) TERM 4953 3910219 - 3910231 + g 75 -4.7 -4.83269 | opp_overlap 3910220, overlap 3910220 3910230 CGCCGCGCCACGTAA ACCGC CAA GCGGA TTTTTAATCTCATGT TERM 4954 3910771 - 3910754 - R 90 -7 -5.28176 | TTGACGGAGAAAAAA GCCCAT GCAGAG ATGGGC TGAAAGTTTCCACGG TERM 4955 3910816 - 3910795 - R 74 -8.6 -3.91911 | overlap 3910796 TCCACGGCAACTAAA TCCCGGCG TTGTTG CGCCGGGT AGTACAACTTCAACT TERM 4956 3910815 - 3910796 - R 78 -12.1 -2.94825 | overlap 3910795 CCACGGCAACTAAAT CCCGGCG TTGTTG CGCCGGG TAGTACAACTTCAAC glnA 3912242 - 3910833 - | glutamine synthetase TERM 4957 3911455 - 3911465 + g 70 -6.8 -4.13945 | CCGGAGCCGTTATCA CCGA ACA TCGG TTTTGGCATAAAGGT TERM 4958 3912462 - 3912448 - H 75 -10 -3.481 | opp_overlap 3912425 3912423 3912410, overlap 3912427 3912425 3912423 3912442 CAATGGAAACATTAA GCACCA TGT TGGTGC AATGACCTTTGGATA yihK 3912615 - 3914438 + | GTP-binding protein TERM 4959 3914475 - 3914462 - T 81 -3.7 -5.28176 | opp_overlap 3914472, overlap 3914464 TTTAGTTATAAAAAA CCTGC CATC GCTGG CTAATGCCAGTCAGT TERM 4960 3914479 - 3914508 + T 89 -9.3 -4.59109 | overlap 3914472 3914481 TGCCATCGCTGGCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4961 3914481 - 3914506 + T 100 -16.3 -3.90762 | overlap 3914472 3914479 CCATCGCTGGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_3884 3915836 - 3914490 - | IS4 orf TERM 4962 3915851 - 3915826 - G 100 -9.8 -5.61596 | opp_overlap 3915826 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4963 3915826 - 3915851 + g 73 -9.1 -3.61398 | opp_overlap 3915826 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4964 3915968 - 3915938 - R 83 -9.8 -4.18018 | opp_overlap 3915943 3915967, overlap 3915943 TTTGCTTATGGAAAA CAAAATCCGCTGAA ATT CCCAGCGGATTTTC CGAAATTTCAATTTC TERM 4965 3915963 - 3915943 - R 100 -9.7 -5.10933 | opp_overlap 3915943, overlap 3915938 TTATGGAAAACAAAA TCCGCTGAA ATT CCCAGCGGA TTTTCCGAAATTTCA TERM 4966 3915943 - 3915963 + r 76 -8.3 -4.12942 | opp_overlap 3915943 3915938 TTATGGAAAACAAAA TCCGCTG AAATTCC CAGCGGA TTTTCCGAAATTTCA yihW 3916770 - 3915982 - | putative DEOR-type transcriptional regulator TERM 4967 3916092 - 3916076 - G 88 -2.1 -5.55664 | GCATCAGTAAAAAAA GCCCTGA CAT TCCGTGC ATTGCCAATTGAAAC yihV 3917706 - 3916810 - | putative kinase yihU 3917879 - 3918757 + | putative dehydrogenase TERM 4968 3919051 - 3919067 + G 71 -2.9 -4.83615 | TAATTCTTGCGGCCT GATTGTC GCT GCCGATC TTTTTATCCCAGGTA yihT 3918782 - 3919666 + | putative aldolase insB 3920163 - 3919660 - | IS1 ORF2 SBO_3890 3920256 - 3920426 + | putative IS1 encoded protein TERM 4969 3920576 - 3920562 - g 88 -11.4 -3.79043 | opp_overlap 3920550 CACCAGGAACTTAAA CCGCAC GAA GTGCGG ATTGCGCCTGTGTTC rspB 3920478 - 3921488 + | putative dehydrogenase SBO_3892 3922539 - 3921634 - | insertion element IS2 transposase InsD SBO_3893 3922862 - 3922497 - | insertion sequence 2 OrfA protein TERM 4970 3923144 - 3923175 + G 71 -9.6 -3.53012 | gap 1, opp_overlap 3923130 3923172, overlap 3923130 3923132 3923171 TCGCCGCGTTAATTG GCGGTTTATTA-GCG AAC CGAGTAATAAACCGC TTTGGGCAAAAGCGG TERM 4971 3923190 - 3923172 - g 78 -8.9 -4.26871 | opp_overlap 3923144 3923171 GAACCGAGTAATAAA CCGCTTT GGGCA AAAGCGG GCATTTATTATTGGC SBO_3894 3923044 - 3924228 + | putative transporter insB 3924742 - 3924239 - | IS1 ORF2 SBO_3896 3924817 - 3925026 + | putative IS1 encoded protein TERM 4972 3925144 - 3925172 + G 76 -7.4 -4.26832 | AAAGTCTGTATTTGT CGGGAGCAGGAT TTTGT GTCCTGTTCGCG TTTCCTTTCTTCTTA SBO_3897 3925029 - 3925541 + | putative transport protein, shikimate SBO_3898 3925531 - 3926418 + | hypothetical protein yihX 3926559 - 3927158 + | phosphatase rbn 3927273 - 3928025 + | ribonuclease BN yihZ 3928022 - 3928459 + | D-tyrosyl-tRNA deacylase yiiD 3928456 - 3929445 + | putative acetyltransferase TERM 4973 3929452 - 3929475 + T 73 -11 -2.61452 | overlap 3929451 3929454 GAAGAGTAGCTTATG GAGAGGGGCG GTGC TGCCTCTCTC ATTCATTCCGGTCAT TERM 4974 3929969 - 3929996 + T 72 -10.6 -2.79133 | opp_overlap 3929969, overlap 3929971 CGATGAGCAAGTAAA GACCGGTTGGTG GCAG TACTGACCGGTC TGTGATGAAAGATTA SBO_3903 3931094 - 3930381 - | IS600 ORF2 yiiF 3932005 - 3932247 + | hypothetical protein TERM 4975 3932269 - 3932258 - T 75 -3 -5.09426 | overlap 3932261 GGTAATGGGAAAAAA TGAT GTCA ATCA GATTGCTGACAACGT TERM 4976 3932289 - 3932318 + T 77 -10.7 -3.30124 | overlap 3932279 GCTGACAACGTGCGC GTTGTTCATGCCG GATG CGGCGTGAACGCC TTATCCGGCCTACAA fdhE 3933506 - 3932577 - | formate dehydrogenase accessory protein FdhE TERM 4977 3933435 - 3933454 + g 70 -10.7 -2.71325 | opp_overlap 3933435, overlap 3933432 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG TERM 4978 3933454 - 3933435 - G 86 -10.7 -3.97307 | opp_overlap 3933435 3933432 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 3934138 - 3933503 - | formate dehydrogenase-O subunit gamma fdoH 3935037 - 3934135 - | formate dehydrogenase-O, iron-sulfur subunit TERM 4979 3934446 - 3934457 + g 70 -5.8 -4.28018 | overlap 3934443 GCTCCGCCACGCGCT CGCT CGCC AGCG TTTTCATCGACTCTT TERM 4980 3934827 - 3934852 + g 85 -11.3 -3.61715 | gap 1, opp_overlap 3934826 3934827 3934829 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA TERM 4981 3934852 - 3934827 - G 73 -11.3 -2.78798 | gap 1, opp_overlap 3934827, overlap 3934826 3934829 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA fdoG 3938100 - 3935050 - | formate dehydrogenase-O, major subunit TERM 4982 3937644 - 3937654 + g 77 -8.2 -4.10657 | AGCGGTTAACAGTCA CGCC TTC GGCG TTTTGCGCAATGTAG fdhD 3938294 - 3939127 + | formate dehydrogenase accessory protein TERM 4983 3939168 - 3939134 - f 100 -11.6 -4.50193 | opp_overlap 3939134 3939137 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 4984 3939134 - 3939168 + F 93 -13.8 -3.5782 | opp_overlap 3939134, overlap 3939137 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 4985 3939137 - 3939165 + F 87 -11.1 -3.91541 | opp_overlap 3939134, overlap 3939134 AATTAATTAAAATAA GTCCTGCGATATA TAT TAAATTGCAGGAC TTATTCATTTCGTGA TERM 4986 3939169 - 3939181 + F 75 -2.7 -5.18715 | AAATTGCAGGACTTA TTCAT TTC GTGAA TTTTATTATTTTTAT yiiG 3939281 - 3940228 + | hypothetical protein insB 3940725 - 3940222 - | IS1 ORF2 SBO_3912 3940800 - 3940982 + | putative IS1 encoded protein TERM 4987 3941143 - 3941119 - T 81 -12.9 -2.72152 | overlap 3941116 3941115 TTGATGATAAATGCA GTGTCGGATGC GGC GCATCTGACAC AGTTCACCCCTTGTG frvR 3942895 - 3941147 - | putative frv operon regulatory protein TERM 4988 3941982 - 3941972 - G 72 -8.2 -3.85539 | opp_overlap 3941976 CAGACTCATATCAAA GGCC GCA GGCC AGGCTGCTTTCAGGT TERM 4989 3942722 - 3942751 + g 73 -9.2 -3.66356 | GATTTCCAGCTGATA GCCCGCACTACC ACTGGC GGAAATGCGGGC TTTGCCGTTAAGGGT TERM 4990 3942808 - 3942786 - G 74 -10.6 -3.14125 | overlap 3942784 TTGAGATAGTCAATA TCACGCAGGA TGG TCCTGCCTGA AACGCCAGTCTGTTG frvX 3943965 - 3942895 - | putative fructose-specific phosphotransferase system protein FrvX frvB 3945412 - 3943955 - | putative PTS transporter components IIBC TERM 4991 3945032 - 3944984 - G 78 -9.4 -3.96327 | gap 1, opp_overlap 3944983 3944984, overlap 3944970 3944967 ACCGCCGATGACAAA CGGCAGCGCCGCAGAGACGCCCG CCAT CAGGTGGCTCATCA-CGCTGCCG CTTTGCATTTCCTGT frvA 3945863 - 3945417 - | putative fructose-like phosphotransferase system subunit EIIA TERM 4992 3946026 - 3946042 + r 70 -2.3 -5.05228 | AACCACATGAATCAT TAATGGG TTA TTCATTA TTTTTGTGATTTACT TERM 4993 3946158 - 3946129 - R 90 -10.7 -4.37198 | overlap 3946131 3946132 AATCGAAATTTAAAA TATTGTGCCGGAG GCAT CTCCGGCACATTG GGCAATTACGGCAGG TERM 4994 3946156 - 3946131 - R 95 -13.3 -3.78026 | overlap 3946129 3946132 TCGAAATTTAAAATA TTGTGCCGGAG GCAT CTCCGGCACAT TGGGCAATTACGGCA TERM 4995 3946155 - 3946132 - R 100 -16.8 -2.86093 | overlap 3946131 3946129 CGAAATTTAAAATAT TGTGCCGGAG GCAT CTCCGGCACA TTGGGCAATTACGGC SBO_3917 3946349 - 3946164 - | putative IS1 encoded protein insB 3946442 - 3946945 + | IS1 ORF2 yiiL 3947255 - 3946956 - | hypothetical protein rhaD 3948089 - 3947265 - | rhamnulose-1-phosphate aldolase TERM 4996 3947969 - 3948003 + g 85 -13.4 -3.20723 | TATAAGGCGCGATAT CGGCGTCATCCAGGCG CAG CGTCAGGTTGCCGCCG TTGCGTTCGTCCCAG TERM 4997 3948147 - 3948193 + r 70 -10.7 -2.5294 | opp_overlap 3948147 3948146 3948173 3948174, overlap 3948178 CGTAGGCCGGATAAG GCGCTCGTGCCGCATCCGGCA ATCAA TGCCTGATGCGACGCTGTCGC GTCTTATCAGGCCTA TERM 4998 3948206 - 3948173 - R 73 -9.5 -3.34344 | opp_overlap 3948147 3948178, overlap 3948147 3948146 3948174 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAACTATTGCCGA TERM 4999 3948205 - 3948174 - R 81 -13 -2.60392 | opp_overlap 3948147 3948178, overlap 3948147 3948146 3948173 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAACTATTGCCG TERM 5000 3948178 - 3948196 + r 79 -11 -3.30124 | opp_overlap 3948147 3948146 3948174 3948173, overlap 3948147 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA TERM 5001 3948298 - 3948265 - R 73 -9.5 -3.34344 | opp_overlap 3948270, overlap 3948242 3948239 3948266 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAACTGTTGCCGA TERM 5002 3948297 - 3948266 - R 81 -13 -2.60392 | opp_overlap 3948270, overlap 3948242 3948239 3948265 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAACTGTTGCCG TERM 5003 3948270 - 3948288 + r 79 -11 -3.30124 | opp_overlap 3948242 3948239 3948266 3948265 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA rhaA 3949615 - 3948356 - | L-rhamnose isomerase rhaB 3951024 - 3949612 - | rhamnulokinase rhaS 3951312 - 3952148 + | transcriptional activator RhaS rhaR 3952132 - 3953070 + | transcriptional activator RhaR rhaT 3954101 - 3953067 - | rhamnose-proton symporter sodA 3954385 - 3955005 + | superoxide dismutase TERM 5004 3955085 - 3955059 - f 78 -5 -5.06451 | opp_overlap 3955063, overlap 3955063 TATCAGCTTAAAAAA TGAACCATCGCC AAC GGCGGTGGTTTT TTTGTGATCAATTTC TERM 5005 3955081 - 3955063 - f 84 -10.2 -3.93769 | opp_overlap 3955063, overlap 3955059 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5006 3955063 - 3955081 + F 100 -12.4 -5.67063 | opp_overlap 3955063 3955059 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5007 3955142 - 3955128 - f 71 -3.6 -4.86001 | ATGATCCGATAAAAA TAAAAC AGC GTTTCA ATTGATGTGGTTTTG kdgT 3955284 - 3956249 + | 2-keto-3-deoxygluconate permease TERM 5008 3956273 - 3956296 + F 95 -13.2 -3.94853 | CCTTAATCCCCACAG CCGGATGAAC TAAC GTTCGTCCGG TTTGCTATTGAGTTC yiiM 3956398 - 3957072 + | hypothetical protein TERM 5009 3957110 - 3957096 - T 73 -10 -3.30124 | opp_overlap 3957099, overlap 3957099 GTGTAGGCCTGATAA GACGCT ATC AGCGTC GCATCAGGCATCCTG TERM 5010 3957188 - 3957170 - T 77 -8.8 -3.86015 | opp_overlap 3957171, overlap 3957171 TATCCTGCCTACAAA TGCGGAGT TTA ACTCCGCT TATACAGCGGCAACC TERM 5011 3957171 - 3957187 + T 81 -12.3 -3.28712 | opp_overlap 3957170 3957171 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC TERM 5012 3957187 - 3957171 - T 79 -12.3 -2.91395 | opp_overlap 3957171, overlap 3957170 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC cpxA 3958551 - 3957178 - | two-component sensor protein TERM 5013 3957835 - 3957825 - G 70 -6.8 -4.05389 | overlap 3957830 GAGAGATATCAGAAA GCAG ACG CTGC TGAGAGGTCATCATG cpxR 3959246 - 3958548 - | DNA-binding transcriptional regulator CpxR cpxP 3959396 - 3959896 + | periplasmic repressor CpxP TERM 5014 3959938 - 3959954 + F 100 -12.3 -5.9873 | ACCATCCCTGTCTTC CCCCACA TGA TGTGGGG TTTTTTTTATCCTCA TERM 5015 3960568 - 3960582 + G 72 -10 -3.30106 | overlap 3960567 3960565 3960575 GTCCTGGTACGGCTG GCATCG CGC CGATGC TCTGTTTGCATTGGG fieF 3960044 - 3960946 + | ferrous iron efflux protein F TERM 5016 3961185 - 3961155 - g 76 -11.1 -3.28712 | opp_overlap 3961180, overlap 3961180 TCGGTGTGTTGACAA GCGGCGGTGATGC GCCAG GCATGAACGCCGC AATTCGCGGGGTTGT TERM 5017 3961415 - 3961403 - g 77 -3.3 -5.15117 | GAAAACCTGAAAAAA CGTGG TAT CGACG CGCTGGTGGTTATCG TERM 5018 3961783 - 3961772 - g 93 -5.8 -5.22039 | overlap 3961774 3961775 GCGAAAGGTAAAAAA CACG CGAT CGTG GCGATTACCGAACAT pfkA 3961127 - 3962089 + | 6-phosphofructokinase TERM 5019 3962171 - 3962145 - f 78 -5 -4.96646 | overlap 3962146 TGACAGAAGCAAAAA TGCCTGATGCGC TTC GCTTATCAGGCC TACATGAATTCTGCA TERM 5020 3962275 - 3962291 + F 93 -9.4 -4.7497 | opp_overlap 3962272 3962275 TTGTCAGCAATATGA GGCGGA TTTCT TCCGCC TTTTTAATCCCTCAA TERM 5021 3963181 - 3963165 - g 84 -3.6 -5.24129 | overlap 3963167 3963176 GTGGTCGAGAAAAAA GGCACC AAAGA GGTGGC GGAAGCCTACCTGAA sbp 3962409 - 3963398 + | sulfate transporter subunit TERM 5022 3963421 - 3963443 + F 93 -6.9 -5.72622 | opp_overlap 3963421 AGGATAATTATCAAA CCCGGTGGT TTCTC GCGACCGGG TTTTTTATTTGTCAC cdh 3963505 - 3964260 + | CDP-diacylglycerol pyrophosphatase TERM 5023 3964305 - 3964283 - T 90 -13.5 -3.6187 | overlap 3964279 AGTTAAGGAAAGTAA GTGCCGGAT ATGAA ATCCGGCAC CTGTCAGACTTAAGC tpiA 3965082 - 3964315 - | triosephosphate isomerase yiiQ 3965789 - 3965190 - | hypothetical protein TERM 5024 3965337 - 3965351 + g 82 -2 -5.33866 | overlap 3965338 3965339 GTTTTTCCCCGCCGT TAGCAG CGA CTGCAG TTTTTTCTGGCTTTG TERM 5025 3965782 - 3965769 - G 88 -2.3 -5.53436 | ACATAAGAGAAAAAA CAGCG TACA CCCTG GCTTCATTGACAGTA yiiR 3965890 - 3966330 + | hypothetical protein TERM 5026 3966358 - 3966405 + F 93 -16 -2.84566 | gap 1, overlap 3966355 CTCTTACTGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAATGACAATACCCGGAAAA TCCTTCTGAACTCTT yiiS 3966542 - 3966841 + | hypothetical protein TERM 5027 3967060 - 3967038 - g 76 -10.8 -3.41024 | opp_overlap 3967032, overlap 3967033 3967036 CCCTGCAACAGAAGA TATTCTTCAA TTG TTGAAGAATA AGTCGGATAACAAGC TERM 5028 3967133 - 3967117 - g 70 -3.6 -4.66537 | overlap 3967112 3967119 TGGCCGAAGACAAAA CTGCGT ATTGA ACGCGG AGAAATGCCGGAAAC yiiT 3966868 - 3967296 + | universal stress protein UspD fpr 3968047 - 3967301 - | ferredoxin-NADP reductase TERM 5029 3967327 - 3967367 + g 72 -10.3 -3.35224 | overlap 3967325 GCTCCGCTGTCATAT GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC TCTTTCAGCAACTGT TERM 5030 3967771 - 3967757 - G 70 -5.7 -4.33417 | TTCATCCAGAACAAA GAAGC CAGCT GCTTC GCTAACCACCTGCAC TERM 5031 3968123 - 3968102 - R 100 -13.1 -5.7946 | CTCCGAACAAAAAAA TTCCAGTCC CGAA GGACTGGAA GGCTCAATCGATCAA glpX 3969154 - 3968144 - | fructose 1,6-bisphosphatase II TERM 5032 3969047 - 3969065 + g 95 -9.5 -4.83169 | opp_overlap 3969034 3969033 ACGCATGGCGTTTAC CGCCGCG CCGTC CGCGGTG TTTTTATCGCCGCGT TERM 5033 3969220 - 3969241 + r 93 -13.7 -3.55444 | overlap 3969221 GTGGGATTATTGATG TGTGCGGGG TTGC CCCCGCACG TTTCAGGACTACCGG TERM 5034 3969221 - 3969240 + r 90 -15 -2.73124 | overlap 3969220 TGGGATTATTGATGT GTGCGGGG TTGC CCCCGCAC GTTTCAGGACTACCG glpK 3970797 - 3969289 - | glycerol kinase TERM 5035 3969317 - 3969330 + g 74 -3.1 -5.02074 | gap 1, overlap 3969308 TCTTCCCACGCCATC GCGCGT TTG AC-CGC TTTTTTCCAGCCTGC TERM 5036 3969771 - 3969781 + g 72 -6.8 -4.25074 | opp_overlap 3969771, overlap 3969779 CCGGAACCACATACA CACC ATT GGTG TTTTGCACTTTGGTG TERM 5037 3970658 - 3970682 + g 72 -8.7 -3.76492 | overlap 3970650 TCCATTGGGTCGTGT TCTACCCAA CCTGGTT TTGGGTAGA TTTGCTCAAATTCGC glpF 3971665 - 3970820 - | facilitated diffusion of glycerol TERM 5038 3972217 - 3972201 - g 74 -2.9 -5.01858 | GAAAGAAAAAAACAA CTCACTG TCG CAGGAAG TTCAAAATGCCCAGC yiiU 3972091 - 3972336 + | hypothetical protein TERM 5039 3972398 - 3972413 + T 93 -10.4 -4.3953 | opp_overlap 3972398 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA TERM 5040 3972413 - 3972398 - T 100 -10.4 -5.31456 | opp_overlap 3972398 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA menG 3972906 - 3972421 - | ribonuclease activity regulator protein RraA menA 3973925 - 3972999 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5041 3973961 - 3973944 - R 100 -9.1 -5.06816 | opp_overlap 3973931, overlap 3973931 ACGCGCCAATAAAAA TGGGGCC TTTC AGCCCCA TCAAACAATGATGAA hslU 3975323 - 3973992 - | ATP-dependent protease ATP-binding subunit hslV 3975863 - 3975333 - | ATP-dependent protease peptidase subunit TERM 5042 3975918 - 3975899 - R 83 -10 -4.05991 | overlap 3975886 3975892 AATACAGAGTACAAA CCCCGTAC AAAA GTACGAGG CATAATGCAATTATA ftsN 3976915 - 3975956 - | essential cell division protein TERM 5043 3976372 - 3976383 + g 70 -5.8 -4.21974 | overlap 3976382 GCGACGTACGCGTCT GCTG CTGC CAGC TTTGTTCAGTCGTAC TERM 5044 3976468 - 3976484 + g 70 -10.1 -3.23853 | overlap 3976459 3976466 GTTGTAGCGTTTGCT GACGCTG TTC CGGCGTC TGTTCATTCCACGGA cytR 3978032 - 3977007 - | DNA-binding transcriptional regulator CytR priA 3980386 - 3978188 - | primosome assembly protein PriA rpmE 3980589 - 3980801 + | 50S ribosomal protein L31 TERM 5045 3980821 - 3980834 + F 100 -9.5 -5.64274 | opp_overlap 3980821 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA TERM 5046 3980834 - 3980821 - f 100 -9.5 -5.02074 | opp_overlap 3980821 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA TERM 5047 3981757 - 3981775 + G 75 -6.7 -4.30844 | gap 1, overlap 3981760 AGCAGGCCATTTCCG GCGGGACG GAAC CGTCC-GC TTTTCCTGATACCCT SBO_3954 3980961 - 3983744 + | putative protein in rhs element insB 3983972 - 3984475 + | IS1 ORF2 SBO_3956 3985495 - 3985181 - | iso-IS1 ORF2 yiiX 3986726 - 3986118 - | putative peptidoglycan peptidase TERM 5048 3986697 - 3986718 + g 85 -7.3 -4.81083 | opp_overlap 3986693 3986694 3986696, overlap 3986696 3986702 AGGTACAGAAACCAG CAGGCTG AGGATCAG CAGCCTG TTTTTCATAGTTAAA metJ 3987227 - 3986910 - | transcriptional repressor protein MetJ TERM 5049 3987804 - 3987860 + G 76 -7.4 -4.24413 | gap 2, opp_overlap 3987843, overlap 3987807 3987808 3987838 GCGCCGCACGACTGC TACGGCGGTAGCTATCGCCTGTTCGACA GTC TGGCGAA-ACGCGGTTGCTATCGC-GTG TTGTTTGTTGATCAA TERM 5050 3987808 - 3987857 + G 73 -11.5 -2.81784 | gap 1, opp_overlap 3987843, overlap 3987807 3987804 3987838 CGCACGACTGCTACG GCGGTAGCTATCGCCTGTTCGACA GTC TGGCGAA-ACGCGGTTGCTATCGC GTGTTGTTTGTTGAT TERM 5051 3987838 - 3987863 + G 70 -6.1 -4.24342 | opp_overlap 3987843, overlap 3987808 3987807 3987804 TGTTCGACAGTCTGG CGAAACGCGGT TGCT ATCGCGTGTTG TTTGTTGATCAAGGC metB 3987504 - 3988664 + | cystathionine gamma-synthase TERM 5052 3990399 - 3990386 - g 76 -8.1 -4.1711 | ATCAGCGCCAACAAA CTGGC GGGA GCCAG CGACAGCAATAAATA metL 3988667 - 3991099 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 5053 3991250 - 3991272 + F 100 -12 -5.42605 | AGTTTATATTTGCAG TCCGGTTTGC TTT GCATACCGGA TTTTCTTTTTCTTAC metF 3991448 - 3992338 + | 5,10-methylenetetrahydrofolate reductase TERM 5054 3992413 - 3992451 + F 71 -10.4 -2.60392 | overlap 3992410 3992415 3992424 GCTGCCTCGAAATGA GGGCGGGAAAATAAGGTT GTC AGCCTTGTTTTCTCCCTC ATTACTTGAAGGATA katG 3992667 - 3994847 + | hydroperoxidase HPI(I) TERM 5055 3994857 - 3994889 + F 100 -17.9 -4.41616 | CTGTAATCTGACCTT CTTCAGTGACTGTCT TTC AGGCAGTCGCTGAAG TTTCTTTACCGGCGT TERM 5056 3995337 - 3995348 + G 77 -7.2 -4.53398 | TTCGCGATTCTGATT GCCG CTTT CGGC TTATTTTTGGTGTTG yijE 3994908 - 3995846 + | hypothetical protein yijF 3996490 - 3995873 - | hypothetical protein TERM 5057 3996722 - 3996763 + r 75 -9.6 -3.65201 | gap 1, opp_overlap 3996734, overlap 3996727 3996734 AGCGCATCAGGCAAT TTTGCGTTCAAACTCCCGG ACAAG CCGGGAGTTTGGA-GTAGG TTATTCCCACTCTTG TERM 5058 3996727 - 3996759 + r 78 -12.8 -2.65808 | opp_overlap 3996734, overlap 3996722 3996734 ATCAGGCAATTTTGC GTTCAAACTCCCGG ACAAG CCGGGAGTTTGGAG TAGGTTATTCCCACT TERM 5059 3996734 - 3996752 + r 86 -11.7 -3.62418 | opp_overlap 3996734, overlap 3996727 3996722 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT TERM 5060 3996752 - 3996734 - R 86 -11.7 -3.53343 | opp_overlap 3996734 3996727 3996722 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT gldA 3997867 - 3996764 - | glycerol dehydrogenase talC 3998540 - 3997878 - | fructose-6-phosphate aldolase TERM 5061 3998055 - 3998043 - G 71 -9.1 -3.53091 | opp_overlap 3998050 ACGCGGCGTTTTAAA GCTGG CCG CCAGC ACCATGCTTTCTGGT ptsA 4000687 - 3998552 - | PEP-protein phosphotransferase system enzyme I TERM 5062 3999489 - 3999502 + g 87 -4.5 -5.27335 | overlap 3999490 TTACGCAGTTGCTGT TTGGC TTCC GCCAG TTTTTCTTTCACCCA TERM 5063 4000897 - 4000908 + H 71 -7.2 -4.19506 | opp_overlap 4000897 TATCGGTGCCAATCA GCGC AAGG GCGC TTTTGGCGTTGCCCT TERM 5064 4001223 - 4001233 + H 70 -2.4 -4.93898 | TATCGCAAGTTATGA GGCG GAT CGCA TTTTTGTACTGATAT frwC 4001362 - 4002441 + | putative fructose-like permease EIIC subunit 2 frwB 4002456 - 4002776 + | putative fructose-like phosphotransferase EIIB subunit 2 TERM 5065 4002785 - 4002802 + F 74 -10.5 -3.27525 | CGCTTAAGTTCTTCT CCCGCTC GCAA GGGCGGG TTCGCTTTCCCACAG TERM 5066 4003214 - 4003190 - gf 81 -6.6 -4.59773 | gap 1, opp_overlap 4003167 CCGTACTGGGAAAAA CGTTCGATGAA AGAT TTCATC-AACG GGCAGATGACGGATG TERM 5067 4003558 - 4003573 + GF 77 -9 -3.8512 | opp_overlap 4003547 4003546 TAAGCCGCAGACGTT CTGGCA GGCG TGCCAG TTATTCTGGTACATG pflD 4002827 - 4005124 + | putative formate acetyltransferase 2 TERM 5068 4005157 - 4005136 - gf 82 -11.5 -3.54459 | opp_overlap 4005135 4005134 GTAACGTTGTGGAAA CGCGCCTCA ATGA TGTGGCGCG CATTTTCAACATTCA TERM 5069 4005345 - 4005359 + GF 72 -9.2 -3.55801 | opp_overlap 4005345, overlap 4005346 CGTGATGCGGATGAA TGCCCC TCC GGGGCG TTTGAACGGATTGGT TERM 5070 4005346 - 4005358 + GF 71 -10.5 -2.73159 | opp_overlap 4005345, overlap 4005345 GTGATGCGGATGAAT GCCCC TCC GGGGC GTTTGAACGGATTGG pflC 4005090 - 4005968 + | pyruvate formate lyase II activase frwD 4005970 - 4006311 + | putative fructose-like phosphotransferase EIIB subunit 3 yijO 4007149 - 4006298 - | putative ARAC-type regulatory protein TERM 5071 4006820 - 4006782 - G 70 -4.4 -4.46212 | opp_overlap 4006791 4006798 4006802 GTTTGTAGCAGAAAA GAACCTATACGTGGGCCG CGT CGGGCGACGTGTTGCTTC GCCAGATTTTGATAT TERM 5072 4006802 - 4006826 + g 74 -6.3 -4.52347 | opp_overlap 4006782, overlap 4006791 4006798 TATACGTGGGCCGCG TCGGGCGACGT GTT GCTTCGCCAGA TTTTGATATTGTTTG TERM 5073 4007223 - 4007203 - R 91 -7.6 -5.1861 | gap 1, overlap 4007187 GGCATTATTAAAAAA GGCCAC-CT GAAA AGTGTGGCC TGAGGGGAGTTCGAT TERM 5074 4007323 - 4007279 - R 100 -17.3 -3.53811 | opp_overlap 4007271, overlap 4007320 CGGATGTGGCGTAAA CGCCTTATCCAGCCTACCG CCGCGAT CTGTAGGCCGGATAAGACG CGTCAAGCGTCGCAT yijP 4009097 - 4007364 - | hypothetical protein TERM 5075 4009045 - 4009029 - G 75 -4.3 -4.84033 | opp_overlap 4009039, overlap 4009032 AGAGAAAAACCAAAA GTAGAGC AGT GCCCAAC CCAGGGCTTTCCAGC TERM 5076 4009262 - 4009241 - R 100 -13.7 -4.41206 | opp_overlap 4009241 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGAAGAGGAA TERM 5077 4009241 - 4009262 + r 82 -11.5 -3.53012 | opp_overlap 4009241 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGAAGAGGAA ppc 4011931 - 4009280 - | phosphoenolpyruvate carboxylase TERM 5078 4012184 - 4012215 + r 77 -11.6 -2.76696 | opp_overlap 4012193 4012195 4012205, overlap 4012183 ACACCAAAGGTGTAG GTCGGATAAGATGC GCAA GCATCGCATCCGAC ATTATTGCGGCACCG TERM 5079 4012242 - 4012280 + r 87 -9.5 -4.25104 | gap 1, opp_overlap 4012220 4012205, overlap 4012245 ACCGGAGTTTGGCAA CG-GTGCCGGATGCGGCG CGAG CGCCTTATCCGGCCTACG TTTTAATGCCAGCAA TERM 5080 4012245 - 4012276 + r 79 -12.2 -2.77781 | opp_overlap 4012220 4012205, overlap 4012242 GGAGTTTGGCAACGG TGCCGGATGCGGCG CGAG CGCCTTATCCGGCC TACGTTTTAATGCCA argE 4013434 - 4012283 - | acetylornithine deacetylase TERM 5081 4013512 - 4013494 - H 73 -2.4 -5.14163 | ATTTATGAATAAAAA TACACTAA CGT TGAGCGTA ATAAAACCCACCAGC argC 4013588 - 4014592 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5082 4014872 - 4014859 - g 71 -2.3 -4.90525 | GAACGGCAAATAAAA CCCTG TTGG CATGG GCGAAGAAACATCAG argB 4014603 - 4015376 + | acetylglutamate kinase argH 4015437 - 4016810 + | argininosuccinate lyase TERM 5083 4016835 - 4016853 + F 100 -9.5 -5.24129 | TATGTACAAATTTGA GCCTGGC TTATC GCCGGGC TTTTTTATGGCAAAA TERM 5084 4016891 - 4016873 - f 100 -11 -5.78622 | TTATGGCAAAAAAAA GCGGATCC TGG AGATCCGC AAAAGTTCACGTTGG oxyR 4017077 - 4017994 + | DNA-binding transcriptional regulator OxyR udhA 4019377 - 4017977 - | soluble pyridine nucleotide transhydrogenase TERM 5085 4019746 - 4019732 - g 100 -2.7 -6.01725 | opp_overlap 4019741 AACAAAAAGAAAAAA CCCGC CGTTC GCTGG TGGAAGCCGCATTTA TERM 5086 4020328 - 4020314 - g 73 -4.2 -4.79752 | GTGAACAAGAGAAAA CCGCAA TTA TTCCGG GAAATGTGAAGGACG yijC 4019644 - 4020348 + | DNA-binding transcriptional repressor FabR TERM 5087 4020543 - 4020556 + G 73 -3.7 -4.77567 | GTAGGCTTGCCGGGT CTGGC AGCT GCCTG TTTTATTCTCGGCGT yijD 4020348 - 4020707 + | hypothetical protein TERM 5088 4020713 - 4020744 + T 100 -15.2 -4.41494 | overlap 4020714 4020715 TGCTGAGTAATCGGT ATCATGCCGGATGC TGGC GCATCCGGCATGGG TTTTACTTCGCGGTC TERM 5089 4020714 - 4020743 + T 100 -18.7 -3.24414 | overlap 4020713 4020715 GCTGAGTAATCGGTA TCATGCCGGATGC TGGC GCATCCGGCATGG GTTTTACTTCGCGGT TERM 5090 4020715 - 4020742 + T 100 -20 -2.54166 | overlap 4020714 4020713 CTGAGTAATCGGTAT CATGCCGGATGC TGGC GCATCCGGCATG GGTTTTACTTCGCGG trmA 4021847 - 4020747 - | tRNA (uracil-5-)-methyltransferase TERM 5091 4020811 - 4020838 + g 74 -9.8 -3.45839 | opp_overlap 4020811 4020809 AACTGATCAAACAGA GCCAGACGTTCG ACCT TGTGCGTCTGGC TTAATGTTTCCAGAT TERM 5092 4022683 - 4022665 - H 70 -9.6 -3.01712 | GCGGGGTGGTGAATA TCATCACG ACG CGCGATGA ACCCGGAACGGAAAT TERM 5093 4024072 - 4024107 + G 95 -14 -3.41125 | gap 1, opp_overlap 4024069, overlap 4024074 CCTTCTGAACCACGT CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG TTGTCGGTCTATGAC TERM 5094 4024807 - 4024855 + G 85 -10.4 -4.18094 | gap 1, opp_overlap 4024807 4024804, overlap 4024808 GAAGCTGAACAATTA TTGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCAG TTTTAGGCTGATTTG TERM 5095 4024808 - 4024854 + G 75 -11.7 -3.10134 | gap 1, opp_overlap 4024807 4024804, overlap 4024807 AAGCTGAACAATTAT TGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCA GTTTTAGGCTGATTT murI 4024009 - 4024866 + | glutamate racemase TERM 5096 4027106 - 4027069 - f 93 -6.3 -5.68438 | opp_overlap 4027071 4027099, overlap 4027071 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5097 4027071 - 4027104 + F 75 -6.7 -4.49756 | opp_overlap 4027071 4027069, overlap 4027099 ATTAAATAAAAAATA CTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 5098 4027104 - 4027071 - f 86 -8.9 -4.47052 | opp_overlap 4027071 4027099, overlap 4027069 ATTAAATAAAAAATA CTTCAGAGTGTACCT GAAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 5099 4027169 - 4027145 - f 71 -8 -3.93061 | gap 1, opp_overlap 4027152 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5100 4027723 - 4027711 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5101 4030212 - 4030191 - f 74 -8.7 -3.91196 | opp_overlap 4030208 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 5102 4030380 - 4030359 - f 82 -11.5 -3.58914 | opp_overlap 4030359 TCAAATTAAGCAGAA GGCCCGGTC GGAA GACTGGGCC TTTTTGCGTTTCTAC TERM 5103 4030359 - 4030380 + F 100 -13.7 -4.84529 | opp_overlap 4030359 TCAAATTAAGCAGAA GGCCCGGTC GGAA GACTGGGCC TTTTTGCGTTTCTAC murB 4030479 - 4031507 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 5104 4031862 - 4031880 + G 81 -9.6 -4.08064 | opp_overlap 4031871, overlap 4031848 4031872 GCCGTGGTCGCCGGG GGCGGAAA TGG TTTTCGCC TTTTGGCGCAAACTT TERM 5105 4031872 - 4031893 + G 74 -8.7 -3.90766 | opp_overlap 4031871, overlap 4031862 CCGGGGGCGGAAATG GTTTTCGCC TTTT GGCGCAAAC TTATATTTGTCGATG birA 4031504 - 4032469 + | biotin--protein ligase TERM 5106 4032491 - 4032474 - T 88 -8.4 -4.80417 | CAGAAAAATAAGAAA GGGGAG TATTCG CTCCCC TGCAAATTATTTGCG coaA 4033448 - 4032498 - | pantothenate kinase SBO_3995 4033790 - 4033635 - | hypothetical protein TERM 5107 4034050 - 4034038 - H 73 -7.7 -4.15222 | opp_overlap 4034034 ACCGGCTCGAATAAA GAGAG CTT CTCTC GATATTCAGTGCAGA TERM 5108 4034412 - 4034396 - g 70 -4.4 -4.4715 | gap 1, opp_overlap 4034396 TTTGAACGTACAAAA CCGCACG TTAA CGT-CGG TACTATCGGCCACGT tufB 4034366 - 4035550 + | elongation factor Tu TERM 5109 4035614 - 4035573 - f 88 -14.5 -3.0792 | opp_overlap 4035574 4035585, overlap 4035585 TAACATTTGACGCAA TGCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGCT TTCGTACCAGAACCT TERM 5110 4035574 - 4035613 + F 100 -13.6 -3.72576 | opp_overlap 4035573 4035585, overlap 4035585 AACATTTGACGCAAT GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC TTTCGTACCAGAACC TERM 5111 4035602 - 4035585 - f 91 -11.3 -4.2679 | opp_overlap 4035574 4035585, overlap 4035573 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5112 4035585 - 4035602 + F 95 -11.3 -4.60924 | opp_overlap 4035585 4035573, overlap 4035574 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5113 4035983 - 4035972 - g 70 -4.4 -4.5442 | opp_overlap 4035972 CTGTTAACGACAAAA GGTA AAGC TACC GTTGCTTTTGCCCGT TERM 5114 4036072 - 4036086 + G 73 -11.4 -2.65264 | CCACGCTGATTGTGG CTGCGG TTA CCGCAG TAATGTCACTGATCC secE 4035780 - 4036163 + | preprotein translocase subunit SecE nusG 4036165 - 4036710 + | transcription antitermination protein NusG TERM 5115 4036745 - 4036727 - f 75 -3 -5.1675 | CCAGCGATCAAAAAA GCGGCGAT TTA ATCGTTGC ACAAGGCGCGAGATT TERM 5116 4036778 - 4036750 - f 86 -13.2 -3.30159 | opp_overlap 4036750 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTATTTTTATGGG TERM 5117 4036750 - 4036778 + F 100 -15.4 -5.35224 | opp_overlap 4036750 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTATTTTTATGGG TERM 5118 4036781 - 4036811 + F 100 -8.4 -5.36441 | overlap 4036783 ACAATTTCGCGCCTT TTATTTTTATGGGC CTT GCCCGTAAAAACGA TTTTTTATATCACGG TERM 5119 4037194 - 4037171 - g 77 -8.2 -4.13343 | gap 1, overlap 4037163 ACAAAGTGGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4036870 - 4037298 + | 50S ribosomal protein L11 TERM 5120 4037845 - 4037805 - g 74 -3.1 -4.98255 | opp_overlap 4037813 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4037302 - 4038006 + | 50S ribosomal protein L1 rplJ 4038419 - 4038916 + | 50S ribosomal protein L10 rplL 4038983 - 4039348 + | 50S ribosomal protein L7/L12 TERM 5121 4039388 - 4039413 + F 100 -17.7 -4.64766 | opp_overlap 4039381 4039379 4039378, overlap 4039359 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5122 4040484 - 4040463 - g 81 -6.5 -4.87665 | gap 1 GTGTACGTAGAAAAA GGC-CGCCGT ATC ACTGCGCGCC ACATTCGCCAGCTGG TERM 5123 4042710 - 4042694 - g 86 -6.5 -5.10033 | overlap 4042695 CGAAGAGAAACAAAA TCAGCTG GAA CAGCTGG CTGAGCAGTATGACG TERM 5124 4042709 - 4042695 - g 77 -10 -3.64393 | overlap 4042694 GAAGAGAAACAAAAT CAGCTG GAA CAGCTG GCTGAGCAGTATGAC TERM 5125 4043598 - 4043588 - g 74 -3.2 -4.91459 | overlap 4043576 CAAGATGTATAAAAA CATC GTG GACG GCAACCATCAGATGG rpoB 4039668 - 4043696 + | DNA-directed RNA polymerase subunit beta TERM 5126 4043715 - 4043744 + F 82 -12.1 -3.4252 | opp_overlap 4043733, overlap 4043716 TCGCTCAAACAGGTC ACTGCTGTCGGGT TAAA ACCCGGCAGCGGA TTGTGCTAACTCCGA TERM 5127 4043716 - 4043743 + F 90 -15.6 -2.65298 | opp_overlap 4043733, overlap 4043715 CGCTCAAACAGGTCA CTGCTGTCGGGT TAAA ACCCGGCAGCGG ATTGTGCTAACTCCG TERM 5128 4045113 - 4045129 + G 72 -7.9 -3.87373 | opp_overlap 4045102 4045112 4045109 CGAAGGTAAAGCTAT CCAGCTG CAC CCGCTGG TTTGTGCGGCATATA TERM 5129 4045608 - 4045624 + G 78 -7.9 -4.40561 | CTGCTACCGCATTCT CGGTCTG AAA CCGACCG TTATTTTTGCGGACC rpoC 4043773 - 4047996 + | DNA-directed RNA polymerase subunit beta' TERM 5130 4048036 - 4048023 - f 100 -9.5 -4.8384 | opp_overlap 4048023 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGGGG TERM 5131 4048023 - 4048036 + F 100 -9.5 -5.60993 | opp_overlap 4048023 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGGGG htrC 4048209 - 4048748 + | heat shock protein TERM 5132 4048774 - 4048749 - T 100 -14.1 -4.17762 | opp_overlap 4048754, overlap 4048754 CAGCCCTCAAAATAA CAAAACCCACC TTAA GGTGGGTTTCG CCAGAGAATTATCTC TERM 5133 4048769 - 4048754 - T 100 -10.4 -5.093 | opp_overlap 4048754, overlap 4048749 CTCAAAATAACAAAA CCCACC TTAA GGTGGG TTTCGCCAGAGAATT TERM 5134 4048754 - 4048769 + T 79 -10.4 -3.53343 | opp_overlap 4048754 4048749 CTCAAAATAACAAAA CCCACC TTAA GGTGGG TTTCGCCAGAGAATT TERM 5135 4048775 - 4048792 + T 70 -9.9 -3.01791 | TTAAGGTGGGTTTCG CCAGAGA ATTA TCTCTGG TATTCAGAACGCCAT TERM 5136 4048888 - 4048905 + T 70 -4.9 -4.41353 | opp_overlap 4048888 4048891, overlap 4048882 CTGCATCCTGGAAGA TGAGAAC ATGT GTTCTTA TTTTCGTCTCTATCA thiH 4050291 - 4049158 - | thiamine biosynthesis protein ThiH thiG 4051058 - 4050288 - | thiazole synthase thiS 4051260 - 4051060 - | sulfur carrier protein ThiS TERM 5137 4051108 - 4051086 - G 72 -4.9 -4.70626 | overlap 4051077 CAATAACCTGAAAAA GCAGGAT CTGGTCGCC ATCCTGC AGGATATGTTGCGTC thiE 4052627 - 4051992 - | thiamine-phosphate pyrophosphorylase thiC 4054522 - 4052627 - | thiamine biosynthesis protein ThiC TERM 5138 4052975 - 4052998 + g 70 -6 -4.20367 | GGCGGCAATCTTATA GGTGATAAGC CCCT GCTTAACATC TTCTTTATTAGGCAG yjaE 4055232 - 4054756 - | anti-RNA polymerase sigma 70 factor TERM 5139 4055384 - 4055348 - g 75 -4.3 -4.78149 | opp_overlap 4055347, overlap 4055351 4055353 CGTATAATTGAAAAA TTAGATCACGGCTGGTG GGT CGTCAGCCATGAACAAA AATTATGGTTGCCGA nudC 4055327 - 4056100 + | NADH pyrophosphatase TERM 5140 4056258 - 4056273 + G 74 -6 -4.56358 | opp_overlap 4056255 4056252 4056247, overlap 4056259 AATATAAAGTCACGC GCGCCC AGGC GGGCGA TTTTATGTCGCTGTG TERM 5141 4056307 - 4056295 - g 74 -6.2 -4.56597 | GTCGCTGTGCAAAAA CGCC GAGCT GGCG TGCGAAGTGACTTTG hemE 4056140 - 4057204 + | uroporphyrinogen decarboxylase TERM 5142 4057301 - 4057289 - g 72 -7.7 -3.89822 | GATCGACTCGATAAA GATCC ACC GGATC TGATCGCCGGAGCCG TERM 5143 4057623 - 4057613 - g 71 -2.4 -5.00616 | opp_overlap 4057613 GGCGTGGCGAAAAAA CGGC TCT GCGG TAAATTCGAACCGCT nfi 4057214 - 4057885 + | endonuclease V yjaG 4057928 - 4058518 + | hypothetical protein hupA 4058705 - 4058977 + | transcriptional regulator HU subunit alpha TERM 5144 4059008 - 4059023 + G 100 -10.4 -4.84918 | opp_overlap 4059008 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC TERM 5145 4059023 - 4059008 - g 72 -10.4 -3.35639 | opp_overlap 4059008 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC yjaH 4058990 - 4059685 + | hypothetical protein zraP 4060112 - 4059687 - | zinc resistance protein TERM 5146 4060215 - 4060242 + H 84 -7.8 -4.81083 | gap 1, opp_overlap 4060215 ATAAACGAGTAAAAA TGACTCGCCTGCT GCG GGTAG-CGAGTCA TTTTTACTCATTGAA TERM 5147 4060242 - 4060215 - H 80 -6.2 -4.85267 | opp_overlap 4060215 ATAAACGAGTAAAAA TGACTCGCCTGC TGCG GGTAGCGAGTCA TTTTTACTCATTGAA TERM 5148 4060548 - 4060586 + G 77 -11.6 -3.14344 | TCCGGCTCGCGCGTC GGCATGGGGATGCGCATG CAT CATGCGCAGCAGCAGGCC TTACTGGAAGAAATG hydH 4060350 - 4061726 + | sensor protein ZraS hydG 4061723 - 4062949 + | response regulator of hydrogenase 3 activity TERM 5149 4062998 - 4062971 - T 100 -12.6 -4.4009 | opp_overlap 4062971, overlap 4062986 CGGCACTGGAGAAAA CGGGCGGCAACA AAAC TGAAGCCGCCCG TCAGTTAGGGATCAC TERM 5150 4062971 - 4062998 + T 78 -12.6 -2.53263 | opp_overlap 4062971 4062986 CGGCACTGGAGAAAA CGGGCGGCAACA AAAC TGAAGCCGCCCG TCAGTTAGGGATCAC purD 4064333 - 4063044 - | phosphoribosylamine--glycine ligase TERM 5151 4063620 - 4063656 + g 72 -8.6 -3.75933 | gap 1, overlap 4063622 4063651 AACGTCATCGGTTAC TACCGGCGCGG-GGGAG TAAG CGCCCATCCCGCCGGTG TTTGGTCCGGTATCT TERM 5152 4063622 - 4063654 + g 71 -9 -3.46088 | gap 1, overlap 4063620 4063651 CGTCATCGGTTACTA CCGGCGCGG-GGGAG TAAG CGCCCATCCCGCCGG TGTTTGGTCCGGTAT purH 4065934 - 4064345 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5153 4066006 - 4065965 - R 100 -20.5 -2.96216 | opp_overlap 4066000 4066002, overlap 4065967 4066002 TTTGACTATTACAGA GAGCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGCCC CTAACGGGGCATCCT TERM 5154 4066004 - 4065967 - R 100 -19.5 -3.03443 | opp_overlap 4066000 4066002, overlap 4065965 4066002 TGACTATTACAGAGA GCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGC CCCTAACGGGGCATC TERM 5155 4066051 - 4066069 + r 73 -2.4 -5.20783 | opp_overlap 4066049, overlap 4066055 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTCTTTCAAT TERM 5156 4066338 - 4066324 - R 76 -4.2 -5.0916 | opp_overlap 4066324, overlap 4066325 4066332 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5157 4066370 - 4066358 - R 71 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACACTCACGACAGT TERM 5158 4068161 - 4068148 - R 75 -6.7 -4.41177 | overlap 4068152 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5159 4068387 - 4068363 - R 71 -8 -3.93061 | gap 1, opp_overlap 4068370 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5160 4068941 - 4068929 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5161 4071430 - 4071409 - R 74 -8.7 -3.91196 | opp_overlap 4071426 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 5162 4071577 - 4071598 + r 100 -13.7 -4.7629 | opp_overlap 4071577 TCAAATTAAGCAGAA GGCCCGGTC GGAA GACTGGGCC TTTTTGCGTTGGTGA TERM 5163 4071598 - 4071577 - R 82 -11.5 -3.58914 | opp_overlap 4071577 TCAAATTAAGCAGAA GGCCCGGTC GGAA GACTGGGCC TTTTTGCGTTGGTGA yjaB 4071967 - 4071677 - | hypothetical protein metA 4072281 - 4073210 + | homoserine O-succinyltransferase TERM 5164 4073256 - 4073271 + F 100 -10.4 -5.63517 | CAGCACCTTACCTCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4073479 - 4075080 + | malate synthase TERM 5165 4076497 - 4076444 - f 70 -10.2 -2.57931 | gap 1, opp_overlap 4076444 4076443 4076487, overlap 4076443 TGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAATCG GTGCA CGAT-GCCTGATGCGACGCTTGCGC GTCTTATCATGCCTA TERM 5166 4076969 - 4076990 + G 79 -3.6 -5.09895 | GTTGCCGGATTACCC GCGCTTCG AGATTG CGGAGAGC TTTTTTAACTCCGTG TERM 5167 4077025 - 4077048 + G 88 -5.2 -5.20783 | overlap 4077026 GTCGGTTATTTGACC ACCGCTCG CTTACTCC CGAGCGGC TTTTTATCTTTAGCT TERM 5168 4077892 - 4077877 - g 81 -4.7 -5.07053 | AAGCAGCGGAAAAAA TCACC GATCTT GGTGA GCAGATTGTAATTCG TERM 5169 4078069 - 4078089 + G 91 -5.3 -5.37345 | overlap 4078070 4078070 TTAAAAACTTCGGTG TCACCCGTC ACG GGCGTGTGG TTTTTTATGATTACG aceK 4076688 - 4078412 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein insB 4078881 - 4079384 + | IS1 ORF2 iclR 4080268 - 4079444 - | transcriptional repressor IclR metH 4080468 - 4084151 + | B12-dependent methionine synthase TERM 5170 4084180 - 4084210 + F 90 -10.4 -4.29106 | opp_overlap 4084184, overlap 4084182 4084184 CACTTTTCCTTACAA CAAACAGGGCGCTC AAT GAGTGCCCTGTCTC TTTATTAATATGAAA TERM 5171 4084182 - 4084208 + F 95 -13 -3.7456 | opp_overlap 4084184, overlap 4084180 4084184 CTTTTCCTTACAACA AACAGGGCGCTC AAT GAGTGCCCTGTC TCTTTATTAATATGA TERM 5172 4084206 - 4084184 - f 95 -13.4 -4.30719 | opp_overlap 4084182 4084180 4084184 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5173 4084184 - 4084206 + F 100 -15.6 -3.44527 | opp_overlap 4084184, overlap 4084182 4084180 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5174 4084447 - 4084465 + G 77 -10.2 -3.70417 | overlap 4084448 4084457 TTCGAACCGGCGTAA TGCGCGTC TTC GGCGCGCG TTTGCGTACTGTCCT TERM 5175 4084448 - 4084464 + G 73 -11.5 -2.81768 | overlap 4084447 4084457 TCGAACCGGCGTAAT GCGCGTC TTC GGCGCGC GTTTGCGTACTGTCC TERM 5176 4084529 - 4084502 - g 86 -4 -5.41143 | GAGCGTCGAAAAAAA GCCGCTCGCC TTTTGCGC GGGGATCGGC GTTACCGCACTGGTA TERM 5177 4085919 - 4085936 + G 70 -4.1 -4.68384 | TTACTGGGAGATATG CAGCG CCTGAACT CGCTG TTTTGTTCGGTGGCT yjbB 4084371 - 4086002 + | putative alpha helix protein TERM 5178 4086086 - 4086066 - T 79 -11.2 -3.45742 | opp_overlap 4086065, overlap 4086064 GCACTATGAACAAGA TGCCGGAT CATGC ATCCGGCA ATTCACTTAAAAACG pepE 4086782 - 4086093 - | peptidase E TERM 5179 4086692 - 4086678 - G 81 -9.2 -4.02534 | AGCGAAAGGGATAAA CACCGC TGA GCGGCG ACCCTGCAACTGTTC TERM 5180 4087032 - 4087053 + r 72 -5.8 -4.48967 | overlap 4087035 ACTTTGCCACCAATT TGAGCGCC CCTTAA GGCGCTGA TGTTTTTTTATCCTT sorE 4088394 - 4087165 - | putative L-sorbose-1-P-reductase TERM 5181 4088191 - 4088232 + g 95 -6.6 -5.4588 | gap 1, overlap 4088195 ATCGCCGCAAAACTC GTGGCCGATGATGATGGGG TTGGT CGCCA-CATCGTCGGGTAC TTTTTTATGGTTTTC sorM 4089270 - 4088428 - | putative sorbose-permease PTS system IID component sorA 4090078 - 4089281 - | putative sorbose-permease PTS system IIC component TERM 5182 4089475 - 4089456 - G 74 -2.8 -4.91852 | CCGAGGAAAAAGAAA GGCATCAA ATAT TTCACGCC CATCATACGTAGCAC TERM 5183 4089644 - 4089628 - G 72 -10.1 -3.36273 | overlap 4089624 GTGCCGGAATAGCAA CGCGCAG CGC CTGCACG CCAAACGCGGAGACA sorB 4090638 - 4090144 - | putative sorbose-permease PTS system IIB component sorF 4091045 - 4090638 - | putative sorbose-permease PTS system IIA component TERM 5184 4091044 - 4091033 - G 71 -2.2 -5.00616 | CGTGGGCGCAAAAAA TGGC ATTG ACCA TAAAGCCTCCTTAGC sorD 4091861 - 4091055 - | sorbitol-6-phosphate 2-dehydrogenase TERM 5185 4091306 - 4091318 + g 73 -9.1 -3.59649 | GCGCGATACCGACCA CACGG ATA CCGTG TTTACCCAATTCTTT SBO_4049 4092878 - 4091931 - | putative transcriptional regulator of sorbose uptake and utilization genes TERM 5186 4094053 - 4094033 - g 72 -4.5 -4.61527 | overlap 4094035 AAAACGGCGGAAAAA GGCGGTCGC CCG GCGTCCAAC GGTAAGCGTTTTACC yjbC 4093226 - 4094098 + | 23S rRNA pseudouridine synthase F yjbD 4094503 - 4094231 - | hypothetical protein lysC 4096104 - 4094755 - | aspartate kinase III TERM 5187 4095136 - 4095123 - G 70 -6.7 -4.12188 | CGAGGATGCCGAAAA CTTCC GCGA GGAAG CCGCGAGAATGCAGC TERM 5188 4095520 - 4095534 + g 70 -4.2 -4.68908 | overlap 4095512 4095521 GCCTCCACGGCCAAG CGTCGT TGT ACGACC TTTATTTTCGCTACC TERM 5189 4096705 - 4096738 + G 100 -14.8 -4.93318 | gap 1, opp_overlap 4096701 4096698 AAATGAAAGACGTTA CGATCGCCGATCTTT TTGCT AAAGA-CGGCGATCG TTTTTCTAAGTTCTC pgi 4096629 - 4098278 + | glucose-6-phosphate isomerase TERM 5190 4098403 - 4098427 + F 100 -14.4 -4.40358 | opp_overlap 4098403 AAATAACCTTAAAAA CAATGCCGAC AATAA GTCGGCATTG TTTTATCAGATAAAT TERM 5191 4098427 - 4098403 - f 100 -14.4 -4.7153 | opp_overlap 4098403 AAATAACCTTAAAAA CAATGCCGAC AATAA GTCGGCATTG TTTTATCAGATAAAT yjbE 4098740 - 4098982 + | hypothetical protein TERM 5192 4099051 - 4099072 + F 82 -11.7 -3.32343 | opp_overlap 4099054, overlap 4099054 TGAAGGGATTTACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5193 4099069 - 4099054 - f 70 -9 -3.42699 | opp_overlap 4099054 4099051 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT TERM 5194 4099054 - 4099069 + F 76 -9 -3.80174 | opp_overlap 4099054, overlap 4099051 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT yjbF 4099066 - 4099734 + | hypothetical protein yjbG 4099944 - 4100468 + | hypothetical protein yjbH 4100468 - 4102564 + | hypothetical protein SBO_4058 4102889 - 4102611 - | hypothetical protein TERM 5195 4102941 - 4102956 + H 78 -5.4 -4.74103 | GCTGGTGGCTGGGAA TCACCT GAAT GGGTGA TTTTTGAATTACCGG yjbA 4103159 - 4103557 + | phosphate-starvation-inducible protein PsiE TERM 5196 4103592 - 4103561 - T 82 -7.2 -4.73388 | overlap 4103563 AAGCGGGAGTAAAAA GACAGCACGCCG AACTGGCG CGGCGTGCTGGA CAGGAAGATTACAGC TERM 5197 4103590 - 4103563 - T 100 -14.2 -3.98256 | overlap 4103561 GCGGGAGTAAAAAGA CAGCACGCCG AACTGGCG CGGCGTGCTG GACAGGAAGATTACA TERM 5198 4104146 - 4104160 + T 73 -7.8 -4.11484 | opp_overlap 4104134, overlap 4104147 ACAGCGCGATATCCG TGCTGG CCC CCAGCG TTTTGAACACTTCCG SBO_4061 4104570 - 4104307 - | putative IS1 encoded protein insB 4104663 - 4105166 + | IS1 ORF2 TERM 5199 4105320 - 4105343 + T 100 -14.6 -3.79668 | CAGTTTAATTTCACT GCAGGCTGGG TAAC TCCAGCCTGC TTTCCTGCATTACAT tyrB 4106546 - 4105353 - | aromatic amino acid aminotransferase TERM 5200 4106375 - 4106354 - G 72 -6.5 -4.42806 | gap 1 CCATCGGTAAATAAA GCGAAGCGCC ATG GG-GCTGCGC ATTCAGGCGCGCTTC alr 4107878 - 4106799 - | alanine racemase dnaB 4109346 - 4107931 - | replicative DNA helicase TERM 5201 4107998 - 4108023 + g 74 -8.9 -3.9281 | CCGTTAAAGGTCAGG CGTACCGTCCC GATT GGGCCGTTACG TTGTTTACCGATAAT TERM 5202 4108674 - 4108694 + g 100 -6.7 -5.80364 | opp_overlap 4108674 4108673 CGACGATGATCAAAT CCGACGGCT GCA AGCCAGCGG TTTTTTTGTTGAGAT TERM 5203 4108994 - 4109011 + g 77 -3.3 -5.02476 | overlap 4108996 GCATAAGCACTGATG TTCGCCG CACT TGGCGTA TTTTTTGACAGCTCT TERM 5204 4109970 - 4109960 - g 88 -8.2 -4.59853 | overlap 4109949 4109961 GGAACCGCGCAAAAA GCGC AGA GCGC GCTAAAAGCCGGCGC qor 4109429 - 4110412 + | quinone oxidoreductase, NADPH-dependent TERM 5205 4110443 - 4110419 - T 100 -10 -4.77775 | opp_overlap 4110421, overlap 4110421 ATTCCATAAAAGAAA TAGGGCTTCC ACCTG GGAAGCCCTT TCTTTTTATAGTCGG TERM 5206 4110441 - 4110421 - T 95 -12.6 -3.99938 | opp_overlap 4110421, overlap 4110419 TCCATAAAAGAAATA GGGCTTCC ACCTG GGAAGCCC TTTCTTTTTATAGTC TERM 5207 4110421 - 4110441 + T 100 -12.6 -4.98911 | opp_overlap 4110421 4110419 TCCATAAAAGAAATA GGGCTTCC ACCTG GGAAGCCC TTTCTTTTTATAGTC pspG 4110819 - 4110577 - | phage shock protein G TERM 5208 4110922 - 4110899 - R 100 -13.1 -4.43681 | opp_overlap 4110896 4110893 GATTTAACAGCAAAA CGCCCCGCG ACGGTG CGCAGGGCG TGGTGAATTTGACTA yjbN 4111990 - 4110953 - | tRNA-dihydrouridine synthase A TERM 5209 4112134 - 4112120 - R 85 -7.2 -5.09259 | CATTGCAAAAGAAAA TTGAGA TCC TCTCAA GGCATGAAGCTCTCA TERM 5210 4112285 - 4112316 + r 82 -13.2 -2.83112 | opp_overlap 4112290, overlap 4112290 TAGCATTGATAGAGA AAAAAGGACCCAAT AAAT ATTGGGTCCTTTTA TATAATGCCTTCCAT TERM 5211 4112311 - 4112290 - R 100 -13.1 -5.4251 | opp_overlap 4112285 4112290 TTGATAGAGAAAAAA GGACCCAAT AAAT ATTGGGTCC TTTTATATAATGCCT TERM 5212 4112290 - 4112311 + r 100 -13.1 -4.57755 | opp_overlap 4112290, overlap 4112285 TTGATAGAGAAAAAA GGACCCAAT AAAT ATTGGGTCC TTTTATATAATGCCT yjbM 4113060 - 4112353 - | hypothetical protein yjbL 4113338 - 4113084 - | hypothetical protein TERM 5213 4113774 - 4113786 + G 71 -9.1 -3.49858 | TGAGTCTGCAGGATG GCGCT ATC AGCGC TTATGATCTGCTTGA yjbK 4113656 - 4114171 + | zinc uptake transcriptional repressor yjbJ 4114422 - 4114213 - | putative stress-response protein TERM 5214 4114446 - 4114465 + r 73 -4.3 -4.77567 | opp_overlap 4114459 CCTCATCGTTAGGTT GTGAATG AGAGTA CGTTCAC TTTTCTTCTGAACGT dinF 4115863 - 4114538 - | DNA-damage-inducible SOS response protein TERM 5215 4115922 - 4115899 - R 100 -16 -4.94262 | GAGATGAAAAACAAA CCGCGACGCC TGGC GGCATCGCGG TCTCAGAGATATGTT lexA 4116544 - 4115936 - | LexA repressor dgkA 4117022 - 4116654 - | diacylglycerol kinase plsB 4117193 - 4119616 + | glycerol-3-phosphate acyltransferase TERM 5216 4119663 - 4119624 - T 80 -12.8 -3.01041 | opp_overlap 4119628 4119638, overlap 4119627 4119628 AAGGGTAACCAGAGA GAATTGCCGGATGCGGCG AAAA CGCCTTATCCGGCATTCC ATAATCTGCAAATTC TERM 5217 4119660 - 4119627 - T 82 -10.9 -3.646 | opp_overlap 4119628 4119638, overlap 4119624 4119628 GGTAACCAGAGAGAA TTGCCGGATGCGGCG AAAA CGCCTTATCCGGCAT TCCATAATCTGCAAA TERM 5218 4119659 - 4119628 - T 87 -14.4 -2.78278 | opp_overlap 4119628 4119638, overlap 4119627 4119624 GTAACCAGAGAGAAT TGCCGGATGCGGCG AAAA CGCCTTATCCGGCA TTCCATAATCTGCAA TERM 5219 4119628 - 4119659 + T 100 -16.6 -3.11634 | opp_overlap 4119627 4119624 4119628, overlap 4119638 GTAACCAGAGAGAAT TGCCGGATGCGGCG AAAA CGCCTTATCCGGCA TTCCATAATCTGCAA TERM 5220 4119741 - 4119758 + T 100 -11.3 -5.1101 | opp_overlap 4119741 GCAACCCAGAAGAAA GCCGGAT GATC ATCCGGC TTTTTTACATCATCA TERM 5221 4119758 - 4119741 - T 91 -11.3 -4.35604 | opp_overlap 4119741 GCAACCCAGAAGAAA GCCGGAT GATC ATCCGGC TTTTTTACATCATCA ubiA 4120643 - 4119771 - | 4-hydroxybenzoate octaprenyltransferase ubiC 4121153 - 4120656 - | chorismate pyruvate lyase TERM 5222 4121333 - 4121364 + H 89 -9.4 -4.62054 | gap 1, opp_overlap 4121329 GGGCAACCATAGGGG CATCACCG-CCCAGG ATG CCAGGAACGGTGATG TTTTCCTTTACTTAA TERM 5223 4122642 - 4122622 - g 100 -5.3 -5.47159 | overlap 4122633 4122636 CGGCAATACAAAAAA GGCAGGAAA ATT TACCCCGCC CCGTCATTGACAGAG SBO_4079 4121697 - 4122824 + | putative transposase yjbI 4124278 - 4123088 - | hypothetical protein TERM 5224 4123515 - 4123557 + g 80 -5.2 -4.88407 | CAATGGCTAAATGTT TTCTTCATATTCTCAATAAA GTT TTTATTAACAATATTAAGAA TTTTTAATTGCATAA TERM 5225 4123996 - 4123984 - G 71 -2.7 -4.82901 | TCGTTTTGAGAAAAA TCACA TTG TGTAA ACGTCGACATTTAAA TERM 5226 4124337 - 4124323 - R 74 -5.8 -4.70659 | TTTTATATTTAAAAA TATATC ACT GATATA AATAAAGTTATCTCT SBO_4081 4124776 - 4124609 - | putative IS1 encoded protein insB 4124869 - 4125372 + | IS1 ORF2 SBO_4083 4125951 - 4125448 - | hypothetical protein TERM 5227 4126627 - 4126612 - g 86 -4 -5.40072 | GGCGCGGCAAAAAAA CCTTCT CGCC AGAAAG CGAAGATTATCTGAA aphA 4126353 - 4127066 + | acid phosphatase/phosphotransferase TERM 5228 4127067 - 4127101 + F 91 -6.5 -5.52384 | gap 2, opp_overlap 4127071, overlap 4127070 AATTCAGAATACTGA CAG-A-GCGGGAGAGCG TGA TGCTCTCCCGAATGCTG TTTTTTTAATCACAC TERM 5229 4127095 - 4127071 - f 75 -11.4 -2.95894 | opp_overlap 4127070 4127067 CAGAATACTGACAGA GCGGGAGAGC GTGAT GCTCTCCCGA ATGCTGTTTTTTTAA yjbQ 4127177 - 4127593 + | hypothetical protein TERM 5230 4127765 - 4127751 - g 74 -7.8 -4.07568 | overlap 4127754 CTGTTTCGCTGAAAA CCAGCC CGG AGCTGG CGGAGCTGCTACGTC yjbR 4127597 - 4127953 + | hypothetical protein TERM 5231 4127980 - 4127962 - T 100 -12.4 -4.55128 | overlap 4127949 ACTCTGAAAGGAAAA GGCCGCTC AGA AAGCGGCC TTAACGATTACAGCA uvrA 4130810 - 4127988 - | excinuclease ABC subunit A ssb 4131064 - 4131600 + | single-strand DNA-binding protein TERM 5232 4131690 - 4131719 + T 89 -9.3 -4.59109 | opp_overlap 4131691 4131692, overlap 4131692 CTCCGTTATGGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5233 4131718 - 4131691 - T 81 -12.8 -3.18264 | opp_overlap 4131690 4131692, overlap 4131692 TCCGTTATGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 5234 4131717 - 4131692 - T 90 -16.3 -2.50816 | opp_overlap 4131690 4131692, overlap 4131691 CCGTTATGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 5235 4131692 - 4131717 + T 100 -16.3 -3.90762 | opp_overlap 4131692 4131691, overlap 4131690 CCGTTATGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SBO_4089 4133017 - 4131701 - | IS4 orf SBO_4090 4133907 - 4133002 - | insertion element IS2 transposase InsD SBO_4091 4134230 - 4133865 - | insertion sequence 2 OrfA protein TERM 5236 4134373 - 4134398 + r 72 -9.1 -3.61398 | opp_overlap 4134373 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 5237 4134398 - 4134373 - R 100 -9.8 -5.61596 | opp_overlap 4134373 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC yjcB 4134824 - 4134474 - | hypothetical protein TERM 5238 4134878 - 4134858 - H 79 -4.1 -5.1523 | opp_overlap 4134858 TGCAGAACACAAAAA TGAAACA CTCTGTT TGTTTCA TTAATTTTGTGAAAT TERM 5239 4135587 - 4135597 + G 82 -2.4 -5.38047 | TCTATCTATTATTAC CGCG ATA CGCC TTTTTTCTCTGGCTA SBO_4093 4135185 - 4135925 + | hypothetical protein SBO_4094 4136077 - 4135907 - | putative IS1 encoded protein insB 4136170 - 4136673 + | IS1 ORF2 TERM 5240 4136876 - 4136893 + G 74 -2.7 -4.94672 | TTTGGTTTGCATGTG GAGTTTG ATCC TGAACTC TTTTTAGTCTTGTTT TERM 5241 4137251 - 4137277 + G 72 -7.4 -3.87815 | gap 1, overlap 4137219 ATGGGGACGATGATC TTC-ACCGTCG GCGGTG CGACGGTCGAA TTTATGAAAGTAGCC yjcE 4136726 - 4138375 + | hypothetical protein TERM 5242 4138453 - 4138395 - f 93 -15.5 -2.76456 | gap 1, opp_overlap 4138416 4138441 4138442, overlap 4138416 4138441 AAAGCGACGTAACCA GGCCCGAGGTAATCTGAAAAAGGTGCAA TCTT TTGCACCTTTAACAGGTTAGCTCGGG-C TAACATTCATGATTC TERM 5243 4138416 - 4138433 + F 75 -9.9 -3.5774 | opp_overlap 4138395 4138416 AGGTAATCTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT TERM 5244 4138433 - 4138416 - f 93 -9.9 -4.67234 | opp_overlap 4138416, overlap 4138395 AGGTAATCTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT insB 4139016 - 4139519 + | IS1 ORF2 TERM 5245 4139578 - 4139555 - T 100 -16.8 -2.79321 | overlap 4139552 TGGAGAGGAAGAGTA TTCCCCGGTC AGGC GACCGGGGAA GGGGAGAGATTAATG actP 4141237 - 4139588 - | acetate permease TERM 5246 4141202 - 4141230 + g 72 -6 -4.33105 | gap 1 GTTAGCTGCGAAAGG GAG-TGTGGCGGC AAGC GCCGTCAGAACTC TTTTCATGATGCTTG yjcH 4141548 - 4141234 - | hypothetical protein TERM 5247 4141470 - 4141485 + g 75 -5.4 -4.62783 | overlap 4141471 TAATCGACAGGATGG TGGCAA ACCG TTGCCG TTTTTCGACTAACTC TERM 5248 4141671 - 4141640 - H 78 -12.2 -2.52464 | opp_overlap 4141639 4141640, overlap 4141650 CCCTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATTGTGGGTTACGAT TERM 5249 4142999 - 4143036 + H 78 -4.7 -5.06414 | CCACCACATGCTCTA CGCTGGTGACGTTCGGG TTTT TCAGCGCGTCATCAACG TTTTTCTTCAGCGGA TERM 5250 4143357 - 4143373 + H 78 -6.5 -4.64676 | opp_overlap 4143357, overlap 4143358 CGCCTTCCCAGATGA TGGCGGT ACG ATCGCCG TTTTCTTGCAGATGG TERM 5251 4144013 - 4143993 - H 100 -9.7 -5.51353 | overlap 4143994 GAAAAACAATAAAAA CCGCCATTG CAA CAATGGCGC AATTCGGATGAAGCC TERM 5252 4144012 - 4143994 - H 95 -13.2 -3.87151 | overlap 4143993 AAAAACAATAAAAAC CGCCATTG CAA CAATGGCG CAATTCGGATGAAGC TERM 5253 4144644 - 4144626 - g 72 -8 -3.8709 | opp_overlap 4144640 AAACCTTTTGAGAAA GCCGGACG TTT CGACCAGC AATCGATGGTTTGCG nrfA 4144032 - 4145468 + | cytochrome c nitrite reductase nrfB 4145507 - 4146079 + | cytochrome c-type protein NrfB TERM 5254 4146179 - 4146228 + G 75 -11.5 -2.93703 | gap 1, overlap 4146181 TGAATATCAATGGGG TGCGTTACGGCATGGTGCATGACG AGT CGTTATGCATCG-GCTGTACCGCC TGTATGGATGCTTGT nrfC 4146076 - 4146747 + | formate-dependent nitrite reductase complex Fe-S centers nrfD 4146744 - 4147700 + | formate-dependent nitrate reductase complex transmembrane protein TERM 5255 4148330 - 4148361 + G 83 -12.9 -3.07935 | overlap 4148328 GCGGCGAGTTTGATG CGGCCAGCGCCCG AATTTG CTGGCGCTGGGCG TTACCTGGCTGGAGT TERM 5256 4149209 - 4149221 + G 77 -6.9 -4.56597 | opp_overlap 4149209, overlap 4149210 GCATTGGTGAACTGA TGCCG GAG CGGCG TTTTTACGAAGCACG nrfE 4147780 - 4149438 + | heme lyase subunit NrfE nrfF 4149431 - 4149814 + | formate-dependent nitrite reductase complex subunit NrfF nrfG 4149811 - 4150407 + | formate-dependent nitrite reductase complex subunit NrfG TERM 5257 4151871 - 4151887 + G 70 -6.5 -4.28713 | GTAGCGTAGGTATTC CGCTGGA AGG TCTGGCG TTTATTGCTGGTGTT gltP 4150748 - 4152061 + | glutamate/aspartate:proton symporter TERM 5258 4152092 - 4152069 - T 71 -9.6 -3.21153 | opp_overlap 4152069, overlap 4152067 ATCAATAATTGAAGA TTGCCGGG GTTATCCA CCCGGCAA TGTGTGGATGCCTGA TERM 5259 4152216 - 4152187 - T 77 -10.7 -3.30124 | opp_overlap 4152188 4152213, overlap 4152188 4152213 4152214 TTGTAGGTCGGATAA GGCGTTTACGCCG CATC CGACATCAACGCC TGATGCGACGCTTAA TERM 5260 4152234 - 4152188 - T 73 -10.9 -2.57931 | gap 1, opp_overlap 4152188 4152213 4152223, overlap 4152187 4152213 4152214 TGTAGGTCGGATAAG GCGTTTA-CGCCGCATCCGACA TCAA CGCCTGATGCGACGCTTAACGC GTCTTATCAGGCCTA TERM 5261 4152213 - 4152247 + T 70 -10.7 -2.53911 | opp_overlap 4152187 4152188 4152213 4152214, overlap 4152188 4152223 CGCATCCGACATCAA CGCCTGATGCGACGC TTAAC GCGTCTTATCAGGCC TACCTTAACCGTTGG TERM 5262 4152246 - 4152214 - T 76 -12 -2.55999 | opp_overlap 4152188 4152213 4152223, overlap 4152187 4152188 4152213 GCATCCGACATCAAC GCCTGATGCGACGC TTAAC GCGTCTTATCAGGC CTACCTTAACCGTTG TERM 5263 4152252 - 4152266 + T 80 -7.2 -4.62302 | CTTATCAGGCCTACC TTAACC GTT GGTTAA TTTTTCAAACTCTTC TERM 5264 4153019 - 4153000 - T 100 -13.6 -5.66684 | GAATGGATAAAAAAA CAGCCTCC GAAA GGAGGCTG TAGAAAGGACTGTAT TERM 5265 4153092 - 4153144 + T 73 -7.9 -4.19177 | gap 4, opp_overlap 4153090 TACTCGTCAATCACG TACTGC-TCG-GCG-G-CGCGCTGATC GGC GATCGGCTCGACGCGCACGGCGCAGTA TTTGTATTCCGGCGT TERM 5266 4153320 - 4153353 + T 74 -8.3 -3.91897 | gap 1 ACCAATGCCTCATCT TCAATACC-CAGACGT TTG GCGTCTTCGGTATTGA TTTGTGCGTAGCCAG TERM 5267 4153867 - 4153878 + T 74 -7.2 -4.30576 | GCAAAATGACATCCG CCGC CGAC GCGG TTTTGGTCATAAAGA TERM 5268 4154352 - 4154373 + T 80 -12.3 -3.06815 | opp_overlap 4154350 GCCGCCTGACGAATC TCACTGGCG CTGA CGCCGGTGA TATCTTCAACCGACT TERM 5269 4154433 - 4154468 + T 93 -9.9 -4.69053 | gap 1 TACTCTTCAAAGCCT TCTGTACGG-GAAGCG ACGAA CGCTTTGTCGTACAGA TTTTCTTCAATAATG TERM 5270 4155372 - 4155347 - T 95 -11.9 -4.10552 | overlap 4155349 CGTGACGAAACGAAA TACCGCGTGAC AGCC ATCACGCGGCA GACATTTTATTTTTT TERM 5271 4155370 - 4155349 - T 88 -12.3 -3.64541 | overlap 4155347 TGACGAAACGAAATA CCGCGTGAC AGCC ATCACGCGG CAGACATTTTATTTT yjcQ 4158892 - 4156841 - | multidrug efflux system protein MdtO TERM 5272 4158644 - 4158620 - G 71 -2.7 -4.8048 | overlap 4158622 4158623 TTTGTAGATCAAAAA CAGGCTGCCGA TCT CCAGCACCGTG GCAACCACAAACAAG yjcR 4159923 - 4158892 - | multidrug resistance protein MdtN TERM 5273 4159434 - 4159448 + g 88 -12.8 -3.62597 | opp_overlap 4159424 4159422 TAAGATCCGCTTCTG CGGCGC GCT GCGCCG TTCTTGCACGGTCAA SBO_4114 4160265 - 4159942 - | formate dehydrogenase H TERM 5274 4160418 - 4160387 - R 79 -8.7 -4.31433 | overlap 4160388 4160389 TATTTTTATAATAAA TGCTTTTGGGGGC TTAAGC GCCCCCAAAAGTG AGTGGCATTAATTTG TERM 5275 4160417 - 4160388 - R 81 -12.2 -3.18378 | overlap 4160387 4160389 ATTTTTATAATAAAT GCTTTTGGGGGC TTAAGC GCCCCCAAAAGT GAGTGGCATTAATTT TERM 5276 4160416 - 4160389 - R 90 -15.7 -2.50545 | overlap 4160388 4160387 TTTTTATAATAAATG CTTTTGGGGGC TTAAGC GCCCCCAAAAG TGAGTGGCATTAATT yjcS 4162423 - 4160426 - | hypothetical protein TERM 5277 4160504 - 4160518 + g 70 -5.7 -4.32607 | CAGTTTCGCGCCATT GCCAA TAATT TTGGC TTTCTTCGCTTTTAC TERM 5278 4161907 - 4161886 - G 70 -7.3 -4.06419 | TGTGGGTATAAATAA CCGCAACAA TCGG TTTTTGCGG GCGATTTTGGAAGTA TERM 5279 4162717 - 4162753 + G 81 -5.8 -4.73613 | overlap 4162718 AATGGGCGGTCATGT CGCTGGCACCGCAG GATTCTGCG TTGCTGTGCCAGCC TTTTATTCATGGTCA TERM 5280 4162718 - 4162752 + G 71 -9.3 -3.43445 | overlap 4162717 ATGGGCGGTCATGTC GCTGGCACCGCAG GATTCTGCG TTGCTGTGCCAGC CTTTTATTCATGGTC TERM 5281 4162829 - 4162848 + G 86 -9.3 -4.41047 | GATTATCCGCATTAT GCCAGTG AAGTTG CACTGGC TTTTGGTTCACGAGT rpiB 4162664 - 4162981 + | ribose 5-phosphate isomerase B SBO_4117 4163050 - 4163379 + | hypothetical protein phnP 4164284 - 4163526 - | carbon-phosphorus lyase complex accessory protein TERM 5282 4163920 - 4163910 - G 70 -6.8 -4.11033 | overlap 4163906 ATCAAACACCACAAA CGGT TCC ACCG TGTGGCTGAAATCAA phnO 4164735 - 4164286 - | aminoalkylphosphonic acid N-acetyltransferase TERM 5283 4164610 - 4164660 + g 70 -6.1 -4.18197 | opp_overlap 4164625 4164626 CATGCTCGGGTCGCG CAGGTTGGCGTTAAAGC-CCACGCG AAA CGCGTGGTGGTCAAACTCC-GCCTG TTTTAGCTCACAAAT phnN 4165279 - 4164722 - | ribose 1,5-bisphosphokinase TERM 5284 4165201 - 4165226 + g 72 -11.7 -2.54325 | opp_overlap 4165190, overlap 4165200 4165216 4165218 GTAACTGCGTTTGTT CCCGCAGGCGG AGTT CCGCCAGCAGG CTGTCTTTCCCGGAG phnM 4166415 - 4165279 - | PhnM TERM 5285 4165947 - 4165965 + g 72 -5.2 -4.56597 | overlap 4165949 GCGACACCAGCGTCA CCGGTTCG CGC TGAACCAG TTTTTCAAACAGCGG TERM 5286 4166031 - 4166046 + g 74 -8.2 -3.97602 | overlap 4166038 GCAGACGGTGCTCGG CGCGGT TGAC GCCGCG TTTCTGCGTCTCTTC phnL 4167092 - 4166412 - | ATP-binding component of phosphonate transport TERM 5287 4167133 - 4167179 + r 88 -12.4 -3.53811 | opp_overlap 4167176, overlap 4167120 4167123 GATGCGACGCTGACG CGTCTTATCCGACCTACGGG GAGCGCA TTTGTAGGCCGGATAAGGCG TTTACGCCGCATCCG phnK 4167961 - 4167203 - | phosphonates transport ATP-binding protein phnJ 4168803 - 4167958 - | PhnJ phnI 4169854 - 4168796 - | PhnI TERM 5288 4169435 - 4169447 + g 78 -10.5 -3.53224 | TGCGGTGGTCAGCGT CGGCG CTT CGCCG TTTGCCAGCAGGGTG phnH 4170438 - 4169854 - | carbon-phosphorus lyase complex subunit TERM 5289 4170041 - 4170027 - G 77 -11.4 -3.14344 | overlap 4170014 TACCCGCGCCAGTAA GGCGCA GCA TGCGCC CGCCGCTCAGGCTGA TERM 5290 4170309 - 4170323 + g 73 -11.4 -2.77043 | overlap 4170308 TGGTGGCGATATTCA GCGGCT GCC AGCCGC GTTTGAGCTGATGCA TERM 5291 4170410 - 4170389 - G 85 -10.1 -4.28018 | AACAGGCGACGAAAA CTGTGCTGG GCAT CCTGCACAG GAAGCATAAAAGCGG phnG 4170887 - 4170435 - | PhnG TERM 5292 4170629 - 4170588 - G 89 -14.3 -3.14683 | opp_overlap 4170597 AGATTGCTGCATCAA CGCGTCAATCAGCGCGCAG CGTT CGGCGTGCTGTTTGTCGCG CCCCAGCACCCAGCT TERM 5293 4170597 - 4170620 + g 79 -10.2 -3.85698 | opp_overlap 4170588 CATCAACGCGTCAAT CAGCGCGCAG CGTT CGGCGTGCTG TTTGTCGCGCCCCAG phnF 4171613 - 4170888 - | putative transcriptional regulator TERM 5294 4171129 - 4171108 - G 70 -5.1 -4.36914 | gap 1 TGCTCGCGCAGAAAA TCGTGCAGCG AGC CGCTGT-CGA AGCGTTGCAGCGTCG phnE 4172413 - 4171634 - | membrane channel protein component of Pn transporter phnD 4173555 - 4172539 - | periplasmic binding protein component of Pn transporter phnC 4174368 - 4173580 - | phosphonate/organophosphate ester transporter subunit TERM 5295 4173700 - 4173678 - G 78 -7.6 -4.36914 | opp_overlap 4173677 TGCCGTCGTAGAAAA CGTGCCCCTG GCG CAGGGCGACG ATGCGTTCGCAGTAG phnB 4174944 - 4174501 - | hypothetical protein TERM 5296 4174808 - 4174827 + g 72 -7.1 -4.24002 | CCGGAAGGGCAGTTC TCGGCGC TGTCCT GCGCTGA TTTTGGCATTTCGCC TERM 5297 4175042 - 4175010 - R 71 -9.8 -3.15708 | opp_overlap 4175021 4175022, overlap 4175019 4175020 ACAGATGAGAGGGAA GCCTGATAAGGCGC GGTCA GCGTCGCATCAGGC AGTCGGCATCGTTGC TERM 5298 4175021 - 4175076 + r 73 -9.7 -3.33261 | gap 2, opp_overlap 4175010 4175019 4175020, overlap 4175022 GGAAGCCTGATAAGG CGCGGTCAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGTGGCGC-GAGCGCC TTATCCGGCTTACCG TERM 5299 4175022 - 4175075 + r 81 -13.2 -2.59742 | gap 2, opp_overlap 4175010 4175019 4175020, overlap 4175021 GAAGCCTGATAAGGC GCGGTCAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGTGGCGC-GAGCGC CTTATCCGGCTTACC phnA 4175439 - 4175104 - | hypothetical protein TERM 5300 4175494 - 4175482 - R 100 -9.1 -5.08011 | AAAAGCGCCAAAAAA CGGCA GAT TGCCG AAAAAGGCCGCAATT SBO_4134 4175926 - 4175696 - | putative IS1 encoded protein insB 4176001 - 4176504 + | IS1 ORF2 TERM 5301 4177380 - 4177368 - f 74 -3.4 -5.03314 | CGCATCTGCAAAAAA TGCT TAACC AGCA GCTGGCACGCGCCTC proP 4179989 - 4181491 + | proline/glycine betaine transporter TERM 5302 4181533 - 4181503 - T 78 -12.6 -2.66593 | overlap 4181499 ATAAGCTGAAACGGA TGGCCTGATGTGAC GCT GTCTTATCAGGCCA ATTGAACTCTTAAGG TERM 5303 4181645 - 4181664 + T 72 -5 -4.65722 | gap 1, overlap 4181648 TAACTACCGTGTTCA GCGTGCTGG TGG TCAGCA-GC TTTCTTTATATCTGG basS 4182770 - 4181670 - | sensor protein BasS/PmrB basR 4183439 - 4182771 - | DNA-binding transcriptional regulator BasR yjdB 4185109 - 4183436 - | putative cell division protein TERM 5304 4185160 - 4185127 - R 90 -9.7 -4.54727 | opp_overlap 4185131, overlap 4185131 GCTCGCAAAGCAAAA TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT ATGTTTGCTGGATTA TERM 5305 4185131 - 4185156 + r 100 -14.9 -4.82128 | opp_overlap 4185127 4185131 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTGG TERM 5306 4185156 - 4185131 - R 100 -14.9 -3.78998 | opp_overlap 4185131, overlap 4185127 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTGG yjdE 4186520 - 4185183 - | arginine:agmatin antiporter TERM 5307 4186486 - 4186454 - G 80 -12 -3.33162 | overlap 4186457 CACCTGACCCCATAA TATTCCCCGACACC ATCAG GGTGACGGGGATTA AGCCCACTTTGTGAG TERM 5308 4186483 - 4186457 - G 84 -13.7 -2.53822 | overlap 4186454 CTGACCCCATAATAT TCCCCGACACC ATCAG GGTGACGGGGA TTAAGCCCACTTTGT adiY 4187418 - 4186657 - | putative ARAC-type regulatory protein TERM 5309 4186748 - 4186738 - G 75 -5.4 -4.69487 | opp_overlap 4186738 4186736 AAAGACAGAAATAAA GTAC GAC GTAC TGTTGTAGCCGCAGG TERM 5310 4187625 - 4187607 - R 100 -8.8 -5.85178 | AACAGGCAAAAAAAA GCGCGG GGTGGGG CCGCGC AAAAAGTATGACATT TERM 5311 4187694 - 4187684 - R 79 -8.2 -4.2349 | overlap 4187685 TTGCCATACTCAAAA GGCC TAA GGCC AGGCGGCGTAATGTT adiA 4190013 - 4187743 - | biodegradative arginine decarboxylase TERM 5312 4188058 - 4188076 + g 90 -7.4 -4.86731 | GGAATAGGCTTCGTT CAACCGTG CGC CAGGGTTG TTTTCTTTCAGCCAG TERM 5313 4188345 - 4188356 + g 72 -7.2 -4.20918 | opp_overlap 4188328 CAGTGACCAGCGCCG CCGG AACA CCGG TTTCTTCCAGTTCAC TERM 5314 4188553 - 4188564 + g 70 -5.8 -4.20367 | TTTTCCGGTTTGTGG GTCG GTGA CGAC TTCTTTGTTCCACGG TERM 5315 4188889 - 4188879 - G 70 -6.8 -4.07687 | opp_overlap 4188879 AGTGGGTGGCGAAAA CGGT AGG ACCG TTGTGATCGCCAGGT melR 4191117 - 4190209 - | DNA-binding transcriptional regulator MelR TERM 5316 4190562 - 4190548 - G 75 -5.6 -4.66537 | opp_overlap 4190558, overlap 4190550 CTGGCTAACATAAAA TTGCGC ATG GCGCGA GACGCTGTTTTTGTG TERM 5317 4190558 - 4190569 + g 74 -2.2 -5.03994 | gap 1, opp_overlap 4190550 4190548 TAAAATTGCGCATGG C-GCG AGA CGCTG TTTTTGTGTGTGCGC TERM 5318 4192052 - 4192040 - g 70 -6.9 -4.14511 | opp_overlap 4192040 4192042, overlap 4192041 AACTGGAGCGTAAAA CCGCC GAC GGCAG TTACGTGAATCTCTA TERM 5319 4192042 - 4192085 + G 80 -11.6 -3.28712 | opp_overlap 4192040 4192041, overlap 4192040 CTGGAGCGTAAAACC GCCGACGGCAGTTACGTGAA TCTC TACCCGGAACTGCTGGCGGC TTATGAAGCAGGGCA TERM 5320 4192645 - 4192620 - g 76 -7.6 -4.18494 | gap 1 TATTCTTACGGAAAA TCGCGACCGTG TTTAC CACG-CCGCGA TGATGGACCCGCATA melA 4191400 - 4192755 + | alpha-galactosidase SBO_4147 4193895 - 4193056 - | IS911 ORF2 TERM 5321 4193464 - 4193475 + g 77 -5.8 -4.63218 | opp_overlap 4193460 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 5322 4193816 - 4193836 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SBO_4148 4194634 - 4195347 + | IS600 ORF2 TERM 5323 4196167 - 4196129 - g 79 -9.7 -3.85698 | gap 1 CGTGCTGGTCAGAAA TTATGACAGCAG-CGCCT TCAA AGGCGACCGCTACCACAA CACGAAAAATGGCAT TERM 5324 4196202 - 4196177 - g 83 -6.1 -4.90906 | CCACAACACGAAAAA TGGCATCAACG CCGA CATCGGTGCCA GTACGAACCTGGATG SBO_4149 4195863 - 4196624 + | hypothetical protein TERM 5325 4196702 - 4196682 - f 91 -11.2 -4.30576 | opp_overlap 4196682 TTTCCATCATCAAAA GTCTGTCG GACAT CGACAGAC TTAACTCCCCCGGAT TERM 5326 4196682 - 4196702 + F 78 -11.9 -3.05463 | opp_overlap 4196682 TTTCCATCATCAAAA GTCTGTCGG ACA TCGACAGAC TTAACTCCCCCGGAT TERM 5327 4196772 - 4196758 - f 80 -7.2 -4.57581 | overlap 4196765 4196766 ACCGGAAACAACAAA GATCAA ATT TTGATC GCAAAGGTCAAAATA TERM 5328 4197657 - 4197675 + G 78 -5.3 -4.80882 | CAAAACTATAATCCC GACTTGT TAAGC GCAAGTC TTTTTAATCTGGACT sigA 4196985 - 4200842 + | serine protease TERM 5329 4200852 - 4200869 + T 100 -14.1 -3.78934 | opp_overlap 4200846 4200848 4200849, overlap 4200849 TTCTGATAACAGCCC GGGCCGC GTTT GCGGCCC TTCTTCTACCGGAGA TERM 5330 4201523 - 4201550 + T 100 -18.6 -3.06133 | opp_overlap 4201516 4201513 AAATATCATTCATCA TGACCGGCGTTT ATAC AAACGCCGGTCA TTCGCTAACAGCTTC SBO_4151 4202281 - 4201874 - | putative protein encoded within IS SBO_4152 4202347 - 4202853 + | hypothetical protein SBO_4153 4203113 - 4203388 + | IS629 ORF1 TERM 5331 4203708 - 4203696 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_4154 4203388 - 4204275 + | IS629 ORF2 SBO_4155 4204259 - 4205164 + | putative protein in IS element SBO_4156 4205902 - 4205189 - | IS600 ORF2 SBO_4157 4206344 - 4206057 - | IS600 ORF1 TERM 5332 4206583 - 4206611 + H 82 -13.4 -3.01712 | opp_overlap 4206588, overlap 4206588 GGGTAAAAGCGCCAT CAAAATACGACA CGACC TGTCGTATTTTG TGTTAGCCGGGAAAA TERM 5333 4206588 - 4206606 + H 82 -7.5 -4.66537 | opp_overlap 4206588, overlap 4206583 AAAGCGCCATCAAAA TACGACA CGACC TGTCGTA TTTTGTGTTAGCCGG TERM 5334 4206606 - 4206588 - H 76 -7.5 -4.27192 | opp_overlap 4206588 4206583 AAAGCGCCATCAAAA TACGACA CGACC TGTCGTA TTTTGTGTTAGCCGG TERM 5335 4206836 - 4206821 - H 73 -10.4 -3.03243 | AGCCAGGGCTGAAGA CGCCCA TTGA TGGGCG AAAACCAAGGTTCTG TERM 5336 4207249 - 4207231 - g 78 -7.4 -4.32034 | CCATCATCATGAAAA TGGATGCG CTG CGTATCCA TGGCAACCGTGCCGC TERM 5337 4209305 - 4209294 - g 74 -5.8 -4.56597 | opp_overlap 4209294 TCGCTTGCGCAAAAA CGCT TCGA AGCG TGGGTTATGCTGGGG TERM 5338 4209814 - 4209804 - g 72 -4.6 -4.66609 | opp_overlap 4209804 CACCTGATGGAAAAA GACG CGA CGCC TAAATTTGGTTCGAT SBO_4158 4206978 - 4210391 + | putative type I restriction enzyme R protein TERM 5339 4210406 - 4210421 + F 100 -11.8 -4.78848 | opp_overlap 4210406 ATACACGCATGACAA GCCCCG GCAG CGGGGC TTTTGTATTTAAAAC TERM 5340 4210421 - 4210406 - f 82 -11.8 -3.4376 | opp_overlap 4210406 ATACACGCATGACAA GCCCCG GCAG CGGGGC TTTTGTATTTAAAAC TERM 5341 4210891 - 4210859 - g 71 -2 -4.88407 | overlap 4210860 4210861 TGAGGTAATCAAAAA CCTGCCATTGG-ATCG CGG CGACACCAAAGGC-GA CCTTTACGAATACCT TERM 5342 4211026 - 4211044 + G 75 -6.6 -4.36914 | overlap 4210998 AGACGATTTGCGATC CCGCCTGT GGC ACCGGTGG TTTTCTGGCAACCAG SBO_4159 4210455 - 4212089 + | putative type I restriction enzyme M protein SBO_4160 4212098 - 4213168 + | putative type I restriction-modification system specificity subunit TERM 5343 4213231 - 4213252 + T 91 -6.5 -5.60864 | opp_overlap 4213231 4213227 ATTTTAGGAAATTAA GGCGTCACT CTTA GGTAACGCC TTTTTTTACTATCTC SBO_4161 4214075 - 4213293 - | putative phage-related protein insB 4214580 - 4214077 - | IS1 ORF2 SBO_4163 4215099 - 4214803 - | putative phage-related protein intB 4216723 - 4215530 - | prophage P4 integrase TERM 5344 4216969 - 4216984 + r 70 -9 -3.45527 | opp_overlap 4216969, overlap 4216967 4216958 TCAGGCATAAAAAAA GACCTC AGTT GAGGTC TATTTACATACTTTT TERM 5345 4216984 - 4216969 - R 100 -9 -5.64274 | opp_overlap 4216969 4216967 4216958 TCAGGCATAAAAAAA GACCTC AGTT GAGGTC TATTTACATACTTTT TERM 5346 4217189 - 4217163 - R 100 -15.3 -3.27476 | opp_overlap 4217156 ATTTTTAATCAGTAA GTTTGGATCCG TAGCC CGGATCCAAAC CAGTGCATCTTTTAT TERM 5347 4217338 - 4217356 + r 74 -11 -2.78018 | overlap 4217334 ACCTCCGGCATTCTG CCGGTGTG ACT CATACCGG TGATTAATCCCCCGT TERM 5348 4217549 - 4217532 - R 100 -12.7 -5.60993 | GTCGGGATAAAAAAA GACCGGC AGAT GCCGGTC AGGTGGGTCAGGTTG SBO_4165 4219890 - 4217557 - | putative DNA primase TERM 5349 4219070 - 4219080 + g 87 -4.6 -5.252 | overlap 4219065 TCACACGCATCTGCG GCTG CGG CGGC TTTTTTCTGGCCGTC TERM 5350 4219510 - 4219520 + g 72 -4.6 -4.62069 | overlap 4219500 4219481 GTAGGCGTTACCGGT TCCG GGA CGGG TTTTTGCCATCAGGG TERM 5351 4219585 - 4219642 + g 100 -14.7 -3.53444 | gap 1, opp_overlap 4219584 GTCTGTTTCAGCAAC GGCGGCGGCCGTCACTGCCGGGTCAGCC GGG GGCAGAC-TGCCGGTCACGGCAGCCACC TTTGCGGCCACGTCG SBO_4166 4220225 - 4219905 - | putative protein encoded in prophage SBO_4167 4220816 - 4220361 - | hypothetical protein SBO_4168 4221688 - 4221089 - | putative bacteriophage protein TERM 5352 4221556 - 4221542 - G 100 -11.4 -5.71712 | opp_overlap 4221541 4221544 TGCGACACAAAAAAA GACGCG TGG CGCGTC ATATGTCGCCTGTGA SBO_4169 4221951 - 4221685 - | hypothetical protein TERM 5353 4222651 - 4222640 - g 100 -5.8 -5.56568 | overlap 4222641 4222642 AGAGCAGGAAAAAAA TGCG CTGG CGCA GGCCGACGGAAATGA SBO_4170 4222503 - 4223237 + | hypothetical protein TERM 5354 4223871 - 4223859 - g 90 -9.1 -4.51812 | TGTCAGAATAACAAA GCAGC ATG GCTGC AACGCAAAAATGAGC SBO_4171 4223808 - 4224380 + | phage polarity suppression protein TERM 5355 4224441 - 4224417 - f 100 -10 -5.08824 | opp_overlap 4224417 4224434 4224435 TTTTTACTGAAAAAA GCCATGCATC GATAA GGTGCATGGC TTTGCATGCGTTTTC TERM 5356 4224417 - 4224441 + F 93 -12.2 -3.71148 | opp_overlap 4224417, overlap 4224434 4224435 TTTTTACTGAAAAAA GCCATGCATC GATAA GGTGCATGGC TTTGCATGCGTTTTC TERM 5357 4224545 - 4224526 - f 91 -11.4 -4.28361 | gap 1 GCAACTGCATTAAAA CCGCCCTGC AAA GC-GGGCGG GCGTGGCGGGGAGAG SBO_4172 4224778 - 4225857 + | hypothetical protein SBO_4173 4226402 - 4227355 + | hypothetical protein TERM 5358 4227364 - 4227417 + T 75 -2.7 -5.26247 | gap 1, opp_overlap 4227377 4227381, overlap 4227377 4227381 ATTATGATCAAAGTG TTTAATACAG-AAATAAACGCCTATA TAT TATAGGCGTTTATTTTCACTATCGAC TTTTGTTTATTTTAG TERM 5359 4227403 - 4227377 - T 100 -15.4 -4.2074 | opp_overlap 4227364 4227377 4227381, overlap 4227381 TGTTTAATACAGAAA TAAACGCCTATA TAT TATAGGCGTTTA TTTTCACTATCGACT TERM 5360 4227377 - 4227403 + T 100 -15.4 -4.23758 | opp_overlap 4227377 4227381, overlap 4227364 4227381 TGTTTAATACAGAAA TAAACGCCTATA TAT TATAGGCGTTTA TTTTCACTATCGACT TERM 5361 4227381 - 4227399 + T 100 -11.8 -4.70515 | opp_overlap 4227377 4227381, overlap 4227377 4227364 TAATACAGAAATAAA CGCCTATA TAT TATAGGCG TTTATTTTCACTATC TERM 5362 4227399 - 4227381 - T 100 -11.8 -4.68132 | opp_overlap 4227381 4227377 4227364, overlap 4227377 TAATACAGAAATAAA CGCCTATA TAT TATAGGCG TTTATTTTCACTATC SBO_4174 4228675 - 4227410 - | putative P4-type integrase yjgB 4229065 - 4230126 + | putative oxidoreductase yjgR 4230256 - 4231758 + | hypothetical protein TERM 5363 4231882 - 4231905 + T 90 -14 -3.46482 | opp_overlap 4231882 4231886, overlap 4231886 CTTTGCTAACAATAA TAAAGGGAGC TTTC GCTCCCTTTA TTCGTTCATTCGGTT TERM 5364 4231905 - 4231882 - T 100 -14 -3.9461 | opp_overlap 4231882 4231886, overlap 4231886 CTTTGCTAACAATAA TAAAGGGAGC TTTC GCTCCCTTTA TTCGTTCATTCGGTT TERM 5365 4231886 - 4231901 + T 90 -10.4 -4.36343 | opp_overlap 4231882 4231886, overlap 4231882 GCTAACAATAATAAA GGGAGC TTTC GCTCCC TTTATTCGTTCATTC TERM 5366 4231901 - 4231886 - T 93 -10.4 -4.57882 | opp_overlap 4231886 4231882, overlap 4231882 GCTAACAATAATAAA GGGAGC TTTC GCTCCC TTTATTCGTTCATTC yjgQ 4233004 - 4231919 - | hypothetical protein yjgP 4234101 - 4233001 - | hypothetical protein TERM 5367 4233230 - 4233216 - G 73 -11.4 -2.65264 | GCAGCATCGATAGTA CGCGTC CCT GACGCG GGTTAACCACGCTCA TERM 5368 4235830 - 4235805 - g 93 -10.3 -4.54727 | opp_overlap 4235807, overlap 4235806 4235807 TCTGGTAAAGCAAAA GGCGCCACCGG TCGT CCGGTGGCGTT GCTGGCACAGTTCCT TERM 5369 4235829 - 4235806 - g 95 -13.8 -3.32354 | opp_overlap 4235807, overlap 4235805 4235807 CTGGTAAAGCAAAAG GCGCCACCGG TCGT CCGGTGGCGT TGCTGGCACAGTTCC TERM 5370 4235828 - 4235807 - g 100 -17.3 -2.5893 | opp_overlap 4235807, overlap 4235806 4235805 TGGTAAAGCAAAAGG CGCCACCGG TCGT CCGGTGGCG TTGCTGGCACAGTTC TERM 5371 4235807 - 4235828 + G 100 -17.3 -3.14881 | opp_overlap 4235806 4235805 4235807 TGGTAAAGCAAAAGG CGCCACCGG TCGT CCGGTGGCG TTGCTGGCACAGTTC pepA 4234368 - 4235879 + | leucyl aminopeptidase TERM 5372 4236318 - 4236300 - g 70 -4.5 -4.56597 | gap 1, opp_overlap 4236300 GCCTGGCCGCAAAAA CGCAGCAG CAGC CCGC-GCG ATATATTGATTAGTC holC 4236039 - 4236482 + | DNA polymerase III subunit chi TERM 5373 4236713 - 4236697 - g 72 -4.3 -4.62783 | overlap 4236700 CATGCAGGGCAAAAA CACCCTG TGG CAGGTCG GTACTGACCACGCCG valS 4236482 - 4239337 + | valyl-tRNA synthetase TERM 5374 4239385 - 4239358 - T 87 -9.8 -4.3014 | opp_overlap 4239362, overlap 4239362 ACACAGTGATGAAAA CGAAGGCCGGAG CATG CTCCGGCCTTTT TTATCTCTTACAGAA TERM 5375 4239381 - 4239362 - T 100 -15 -3.72073 | opp_overlap 4239362, overlap 4239358 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC TERM 5376 4239362 - 4239381 + T 100 -15 -5.47431 | opp_overlap 4239362 4239358 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC SBO_4183 4239642 - 4239466 - | putative IS1 encoded protein yjgN 4241192 - 4240173 - | hypothetical protein insB 4239735 - 4240238 + | IS1 ORF2 insB 4241697 - 4241194 - | IS1 ORF2 SBO_4187 4241811 - 4242452 + | hypothetical protein TERM 5377 4242476 - 4242507 + T 91 -10.9 -4.19678 | opp_overlap 4242475 TGCATAAAATAATGT GATGCCGGGATGT TTTTGT ATTTCCCGGCATC TTTATTGCGATATCA argI 4243528 - 4242524 - | ornithine carbamoyltransferase subunit I yjgD 4243690 - 4244106 + | hypothetical protein TERM 5378 4244146 - 4244121 - T 87 -9.7 -4.31379 | opp_overlap 4244121 ATTAATTGATTAAAA TGCCCGATAGC ACAC ACTAGCGGGCA TTTTTTTAGAGTTCG TERM 5379 4244121 - 4244146 + T 100 -9 -5.47399 | opp_overlap 4244121 ATTAATTGATTAAAA TGCCCGATAG CACACA CTAGCGGGCA TTTTTTTAGAGTTCG yjgM 4244654 - 4244259 - | putative acetyltransferase SBO_4192 4245218 - 4244985 - | putative IS1 encoded protein SBO_4191 4244820 - 4245065 + | hypothetical protein insB 4245293 - 4245796 + | IS1 ORF2 TERM 5380 4246057 - 4246039 - T 80 -6 -5.0538 | GGGGATTTTAAAAAA GTCATCCA GAA TCGATGAC CGGTGTAAGGTTAAC SBO_4194 4246963 - 4246040 - | hypothetical protein TERM 5381 4247079 - 4247048 - R 71 -7.4 -3.85698 | overlap 4247049 CGCTCTTTTCACAAA CTCGCCGTAAAC CTGGAGTT ATTTACGGCGAA AAGTCATCACGCCAT yjgK 4247547 - 4247086 - | hypothetical protein yjgJ 4247937 - 4247683 - | hypothetical protein SBO_4197 4248173 - 4248009 - | hypothetical protein yjgI 4248347 - 4249060 + | oxidoreductase TERM 5382 4249080 - 4249105 + F 80 -5.4 -4.93877 | opp_overlap 4249080 CTACGCTCAATTAAG CCCAGCCATT TCCCAT GATGTCTGGG TTTTGTTTACTCACG yjgH 4249191 - 4249586 + | hypothetical protein TERM 5383 4249698 - 4249684 - f 95 -2.8 -5.93252 | GTGAAAAAGAAAAAA GCAG GAAATGT CTGC AATTATTGATACCGA TERM 5384 4249955 - 4249972 + G 100 -12.7 -5.75342 | GATCACCCATTCCCA GCCCCTC AATC GAGGGGC TTTTTTTTGCCCAGG pyrL 4249866 - 4250000 + | pyrBI operon leader peptide pyrB 4250004 - 4250939 + | aspartate carbamoyltransferase catalytic subunit pyrI 4250952 - 4251413 + | aspartate carbamoyltransferase regulatory subunit TERM 5385 4251432 - 4251457 + F 93 -10.5 -4.61231 | opp_overlap 4251432 CGGTTGGTAATAAAA GTCTGGCTC CCTATAAT GAGCCAGAC TTTTTACCGCTGTAA TERM 5386 4251457 - 4251432 - f 93 -10.5 -4.63218 | opp_overlap 4251432 CGGTTGGTAATAAAA GTCTGGCTC CCTATAAT GAGCCAGAC TTTTTACCGCTGTAA yjgF 4251447 - 4251872 + | hypothetical protein TERM 5387 4251904 - 4251885 - T 83 -10.7 -3.65827 | opp_overlap 4251885 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA TERM 5388 4251885 - 4251904 + T 74 -10.7 -3.14468 | opp_overlap 4251885 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA mgtA 4254774 - 4252078 - | magnesium-transporting ATPase MgtA TERM 5389 4254441 - 4254425 - G 72 -5.1 -4.49556 | CCCGCAGCAAATAAA TCTTCCG TGG CGTAAGA AATAGCGCCGAGAAT treR 4255153 - 4256118 + | trehalose repressor TERM 5390 4256140 - 4256153 + F 91 -8.1 -4.92239 | ATCTTCGCTGCGTTT CGGGA ACGT TCCCG TTTTTAAATTTTTCC treB 4256219 - 4257640 + | trehalose(maltose)-specific PTS system components IIBC TERM 5391 4259234 - 4259220 - g 75 -11.4 -3.1247 | AGCCGTGAGATCCAA CCCTGG CAG CCAGGG CAAATGCGCGGCAAC treC 4257690 - 4259345 + | trehalose-6-phosphate hydrolase TERM 5392 4259358 - 4259383 + F 93 -9.8 -4.60797 | gap 1 TAAATCTTCCCTAAG CCCCGGTAATG CCGGT CATT-CCGGGG TTTTGTCTGTCAGCA TERM 5393 4260048 - 4260021 - g 77 -6.2 -4.67234 | gap 1, opp_overlap 4260020 4260023, overlap 4260023 ATTGAACGTGAAAAA CGCGG-TCGCCTG AAT CAGGAGATCCGTG GTCTGGTCGAGCAGA nrdD 4259739 - 4261877 + | anaerobic ribonucleoside triphosphate reductase TERM 5394 4261945 - 4261913 - f 72 -10.5 -2.76162 | opp_overlap 4261894 4261893 4261924 4261928 4261932, overlap 4261894 4261912 GATGTGATGTGAAAG CGTCGCATCCCGC GTTGATT GCCGGATGCGGCG TAAACGCCTTATCCG TERM 5395 4261932 - 4261963 + F 78 -12.2 -2.64155 | opp_overlap 4261913 4261912 4261950, overlap 4261924 4261928 GCATCCCGCGTTGAT TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACATTTGGCAACGG TERM 5396 4261997 - 4261950 - f 88 -12.2 -3.53811 | opp_overlap 4261924 4261932 4261928 4261984 4261985, overlap 4261994 CGGATGCGGCGTAAA CGCCTTATCCGGCCTACA TTTGGCAACGGC TGTAGGCCTGATAAGACG CGACAGCGTCGCATC TERM 5397 4261984 - 4262017 + F 73 -9.5 -3.34344 | opp_overlap 4261950 4261994, overlap 4261985 TTGGCAACGGCTGTA GGCCTGATAAGACGC GACA GCGTCGCATCAGGCA TTGATTACCGGATGC TERM 5398 4261985 - 4262016 + F 81 -13 -2.60392 | opp_overlap 4261950 4261994, overlap 4261984 TGGCAACGGCTGTAG GCCTGATAAGACGC GACA GCGTCGCATCAGGC ATTGATTACCGGATG TERM 5399 4262012 - 4261994 - f 79 -11 -3.30124 | opp_overlap 4261985 4261984, overlap 4261950 CTGTAGGCCTGATAA GACGCGAC AGC GTCGCATC AGGCATTGATTACCG nrdG 4262067 - 4262531 + | anaerobic ribonucleotide reductase-activating protein TERM 5400 4262568 - 4262535 - T 93 -14.7 -3.4072 | overlap 4262536 CATTTGCGATGATAA GTTCCCTGTTACCTG AGTG CAGGCAACAGGGAAA TGAGGAATTAACGAT TERM 5401 4262567 - 4262536 - T 100 -18.2 -2.64218 | overlap 4262535 ATTTGCGATGATAAG TTCCCTGTTACCTG AGTG CAGGCAACAGGGAA ATGAGGAATTAACGA cybC 4262878 - 4262576 - | cytochrome b562 TERM 5402 4262826 - 4262839 + g 75 -5.2 -4.58685 | overlap 4262804 GCGTCTTTGACTTGC GCCG CGTTAT CGGC TTTTTCGACCACTTT TERM 5403 4263119 - 4263140 + r 86 -4.3 -5.58454 | overlap 4263120 GTAATTTTTTAGTTT ATAGCGCGA CAGG TCGCGCCAG TTTTTTTACTGTCCG TERM 5404 4263120 - 4263139 + r 71 -7.8 -3.93988 | overlap 4263119 TAATTTTTTAGTTTA TAGCGCGA CAGG TCGCGCCA GTTTTTTTACTGTCC pmbA 4264498 - 4263146 - | peptidase PmbA yjgA 4264592 - 4265143 + | hypothetical protein TERM 5405 4265166 - 4265205 + T 79 -12.8 -2.88544 | overlap 4265169 4265180 TGTTGATGTGAGTAT GGTTTGCCGGATGCGGCG TAAA CGCCTTATCCGGCAATGC TATCTCAGGCTGAGG TERM 5406 4265169 - 4265202 + T 100 -17.5 -2.69468 | overlap 4265166 4265180 TGATGTGAGTATGGT TTGCCGGATGCGGCG TAAA CGCCTTATCCGGCAA TGCTATCTCAGGCTG yjfG 4266599 - 4265226 - | putative ligase TERM 5407 4266830 - 4266807 - g 81 -9.6 -4.09864 | ATTTATTGTCGAAAA GCAGCACGAG TTTT CTCATGCTAC CGGTGAGCTCACTGC TERM 5408 4267577 - 4267591 + G 74 -8.6 -3.91897 | CCAGCCACCCGGACG GCAAAC TGC GTTTGC TTTATGAGTGCAACC fbp 4266775 - 4267773 + | fructose-1,6-bisphosphatase TERM 5409 4267781 - 4267802 + T 100 -10.1 -4.87665 | overlap 4267782 ACGCGTAATCTCCTG CGCCTCTCC ACAC GGAGAGGCA TTTTTATCGCTGCGC TERM 5410 4267782 - 4267801 + T 93 -13.6 -3.52117 | overlap 4267781 CGCGTAATCTCCTGC GCCTCTCC ACAC GGAGAGGC ATTTTTATCGCTGCG yjfF 4268777 - 4267806 - | inner membrane ABC transporter permease protein YjfF TERM 5411 4267934 - 4267907 - G 77 -3.4 -5.10765 | gap 1, overlap 4267909 AAATAAACAACAAAA TACCGATGG-CGA TTT TCGTCCACCAGGA ACTCAGCGTGCCGTC TERM 5412 4268507 - 4268493 - G 72 -7.8 -3.90328 | overlap 4268506 CAGAAGCCCCATAAA TGCGCC GAA GGCACA GCCCATCACCAGCAC ytfT 4269813 - 4268788 - | putative transport system permease protein TERM 5413 4270264 - 4270290 + r 70 -5.1 -4.43213 | gap 1, overlap 4270276 TGATATTTTCCCGCA CCGA-GGCGGCA GCGA TGATGCCATCGG TTTTCCTGTCTTCCG TERM 5414 4271285 - 4271301 + r 74 -8.7 -3.8505 | opp_overlap 4271285, overlap 4271296 GAAAAATTTACTTAA TCCTTCG GTG CGGAGGA TTTCCTGGTGTTGGT ytfQ 4272422 - 4271466 - | putative LACI-type transcriptional regulator TERM 5415 4271606 - 4271596 - G 77 -8.2 -4.08767 | opp_overlap 4271604 TCCAGCGCGTCAAAA GCGG GTC CCGC CATATTCGGCGTCAG TERM 5416 4272234 - 4272250 + g 70 -7.3 -4.12902 | CCGGTTTTCCTGCTT TTGCTGA CCA TCGGCAA TTTTCAACGTAATTC ppa 4272732 - 4273262 + | inorganic pyrophosphatase SBO_4220 4273853 - 4274758 + | insertion element IS2 transposase InsD TERM 5417 4274924 - 4274957 + T 87 -11.1 -3.86312 | opp_overlap 4274929 4274932, overlap 4274929 4274932 GCGAGATACATCGCA TAAAACAACGCCACC CGAA GGTGGCGTGCTTTTA TTATTACTTATCCCT TERM 5418 4274951 - 4274929 - T 90 -9.9 -4.4195 | gap 1, opp_overlap 4274924 4274929 4274932, overlap 4274932 ATACATCGCATAAAA CAACGCCACC CGAA GGTGGCG-TG CTTTTATTATTACTT TERM 5419 4274929 - 4274952 + T 83 -6.6 -4.95167 | opp_overlap 4274929 4274932, overlap 4274924 4274932 ATACATCGCATAAAA CAACGCCACC CGAA GGTGGCGTGC TTTTATTATTACTTA TERM 5420 4274949 - 4274932 - T 95 -12.7 -4.32067 | opp_overlap 4274929 4274924 4274932, overlap 4274929 CATCGCATAAAACAA CGCCACC CGAA GGTGGCG TGCTTTTATTATTAC TERM 5421 4274932 - 4274949 + T 85 -12.7 -3.32865 | opp_overlap 4274932 4274929, overlap 4274929 4274924 CATCGCATAAAACAA CGCCACC CGAA GGTGGCG TGCTTTTATTATTAC ytfP 4275302 - 4274961 - | hypothetical protein TERM 5422 4275225 - 4275239 + g 72 -11.4 -2.52834 | opp_overlap 4275224 4275223, overlap 4275224 4275228 4275237 ATCGATACTGAAATC GCCCAG TAA CTGGGC ATTGGTCATCCAGTG ytfN 4279084 - 4275305 - | hypothetical protein TERM 5423 4275355 - 4275334 - G 70 -10.9 -2.70315 | overlap 4275331 4275330 GATAGAGCAAATCCA GTGCCTGGT CTAC ACCAGACAC GGCTTCCAGATATAG TERM 5424 4276950 - 4276989 + g 79 -2.1 -5.22794 | gap 1, overlap 4276953 4276968 TGCGGCACGCACAGT TCCGCATTCGGGTTAAGC CAGCA GTGTGGCCCG-ATGCTGA TTTTTTGCTCCTTAT TERM 5425 4278474 - 4278485 + g 72 -5.8 -4.43272 | CCGAGCGGCTTTTCA TCCG GCTG CGGA TTTTCAATTTTCGGT ytfM 4280814 - 4279081 - | hypothetical protein TERM 5426 4279427 - 4279415 - G 79 -4.7 -5.00616 | CCCCCGGCGAAAAAA CGCAG ATC CGGCG GTACTTTGTCGAAAT TERM 5427 4280889 - 4280876 - H 70 -2.4 -5.06816 | ACGGCTTAACAAAAA TCCA GTAATA TGGA TTAAAAAGCAGACTA msrA 4281020 - 4281658 + | methionine sulfoxide reductase A ytfL 4281981 - 4283324 + | putative transport protein TERM 5428 4283368 - 4283335 - T 71 -7.5 -3.89614 | gap 1, opp_overlap 4283339 4283341, overlap 4283337 4283341 CGTAACCCCCAGAAA CATCA-ACGGCTCCTG AAT CAGGAGCCGTCTTATT ACTGCATAGCACTTT TERM 5429 4283366 - 4283337 - T 75 -10.1 -3.5362 | gap 1, opp_overlap 4283339 4283341, overlap 4283335 4283341 TAACCCCCAGAAACA TCA-ACGGCTCCTG AAT CAGGAGCCGTCTTA TTACTGCATAGCACT TERM 5430 4283339 - 4283363 + T 100 -14.3 -3.73647 | opp_overlap 4283337 4283335 4283341, overlap 4283341 ACCCCCAGAAACATC AACGGCTCCTG AAT CAGGAGCCGTC TTATTACTGCATAGC TERM 5431 4283341 - 4283361 + T 100 -16.9 -3.44998 | opp_overlap 4283337 4283335 4283341, overlap 4283339 CCCCAGAAACATCAA CGGCTCCTG AAT CAGGAGCCG TCTTATTACTGCATA TERM 5432 4283361 - 4283341 - T 100 -16.9 -3.50335 | opp_overlap 4283341 4283339, overlap 4283337 4283335 CCCCAGAAACATCAA CGGCTCCTG AAT CAGGAGCCG TCTTATTACTGCATA ytfK 4283631 - 4283386 - | hypothetical protein ytfJ 4283917 - 4284471 + | hypothetical protein ytfI 4285472 - 4284561 - | hypothetical protein TERM 5433 4285113 - 4285125 + g 74 -6.3 -4.51812 | opp_overlap 4285113, overlap 4285109 TTTGAAATCCATGAA TGAGT TAT ACTCA TTTATTGTTATGGGG TERM 5434 4285681 - 4285639 - R 80 -10.1 -3.86346 | gap 1, opp_overlap 4285638 4285639 4285643 TTAGGTTGGGAGAAA TCAGGATGGCAGAATCAG GAAATACA CTGTTTCTGCCATC-TGA ATTTAGTAAATAGAC TERM 5435 4285643 - 4285678 + r 76 -12 -2.68279 | opp_overlap 4285639, overlap 4285639 4285638 GTTGGGAGAAATCAG GATGGCAGAATCAG GAAATACA CTGTTTCTGCCATC TGAATTTAGTAAATA cysQ 4286424 - 4285684 - | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 5436 4287240 - 4287295 + G 75 -11.8 -2.88663 | opp_overlap 4287237 CGTGCGCAAATACGT GCCTGAAATGCGCGAGAAAGGTGCCG ATGT CGTTGTCGTTCTGGCGCATTCCGGGC TGTCTGCCGATCCGT TERM 5437 4287903 - 4287892 - g 70 -3.6 -4.59773 | GTGGAGGTGGAAAAA GGCC AGTT GACC TTCCGTAATGCCGCC cpdB 4286614 - 4288557 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 5438 4288617 - 4288589 - Tf 79 -11 -3.35467 | opp_overlap 4288613 4288616, overlap 4288590 TCTATAAATTATCAA CCGCATCCGGCA TTTAT TGGCGGATGCGA TGCTGGCGCATCTTA TERM 5439 4288616 - 4288590 - Tf 78 -12.3 -2.60798 | opp_overlap 4288613, overlap 4288589 CTATAAATTATCAAC CGCATCCGGCA TTTAT TGGCGGATGCG ATGCTGGCGCATCTT ytfH 4289156 - 4288686 - | hypothetical protein TERM 5440 4289870 - 4289852 - gH 72 -6.6 -4.18018 | overlap 4289853 CCGCGGCACTGAAAA GCGTCGGA CTG CCCGACGG ACTGGCGGATATGCT TERM 5441 4289869 - 4289853 - gH 70 -10.1 -3.10597 | overlap 4289852 CGCGGCACTGAAAAG CGTCGGA CTG CCCGACG GACTGGCGGATATGC ytfG 4289155 - 4290015 + | putative oxidoreductase ytfF 4290114 - 4291088 + | putative transmembrane subunit TERM 5442 4291167 - 4291149 - f 72 -9 -3.53091 | opp_overlap 4291149 AGCTTTTGCCTTAAA GATGTATT TAA AATACATC TTATCTTATTAAGAA TERM 5443 4291149 - 4291167 + F 76 -9 -3.83318 | opp_overlap 4291149 AGCTTTTGCCTTAAA GATGTATT TAA AATACATC TTATCTTATTAAGAA ytfE 4291196 - 4291858 + | cell morphogenesis/cell wall metabolism regulator TERM 5444 4291890 - 4291866 - T 100 -16.5 -4.19817 | opp_overlap 4291887 GTGAGTGATCTAAAA GCTGGATGGCA TTG CGCCATCCAGC ATGATAATGCGGTTA cycA 4293315 - 4291903 - | D-alanine/D-serine/glycine permease insB 4294890 - 4294387 - | IS1 ORF2 SBO_4237 4294983 - 4295183 + | putative IS1 encoded protein TERM 5445 4295846 - 4295859 + G 70 -3.7 -4.71426 | overlap 4295844 GTCCTGTTCACCCGC CAGCC GGAT GGCAG TTTTATTCGTGCGCG ytfB 4295204 - 4295878 + | hypothetical protein ytfA 4296188 - 4295862 - | hypothetical protein SBO_4241 4296721 - 4297512 + | 3-ketoacyl-(acyl-carrier-protein) reductase SBO_4242 4297522 - 4298364 + | hypothetical protein TERM 5446 4299138 - 4299125 - g 71 -2.3 -5.00616 | CCTTTGCCGAAAAAA GTAGC GTGA GCTTC CATAATCAATAAGGA SBO_4243 4298374 - 4299150 + | hypothetical protein TERM 5447 4299193 - 4299176 - g 72 -7.7 -3.9644 | gap 1 TGCGTAAGATAACAA CCGCCGAG GCA CT-GGCGG CGCAAATTCAGGACG TERM 5448 4299512 - 4299529 + G 95 -10.5 -4.58283 | TGCTACGGGAGATCG GCTCCGG ACGT CCGGGGC TTTTTACCCACGTTG SBO_4244 4299160 - 4300701 + | putative enzyme insB 4302995 - 4303498 + | IS1 ORF2 TERM 5449 4304799 - 4304811 + G 70 -6.2 -4.21438 | opp_overlap 4304798 ATTCGTTCACATTAT CGGC TTCGC GCCG TTCTTTATTGCCCTG SBO_4247 4303639 - 4304889 + | transport protein of hexuronates insB 4305386 - 4304883 - | IS1 ORF2 SBO_4249 4305461 - 4305724 + | putative IS1 encoded protein SBO_4250 4305828 - 4306385 + | hypothetical protein TERM 5450 4306442 - 4306400 - T 88 -8.4 -4.74132 | opp_overlap 4306412 4306441, overlap 4306407 4306412 ATACCTGACGAAAAA TAGAAAGCAAAACGCCGACC AAT GGTCGGCGTTTTTACGTCTC GTTGAATAACGAATT TERM 5451 4306435 - 4306407 - T 100 -16.1 -3.33352 | opp_overlap 4306412, overlap 4306400 4306412 ACGAAAAATAGAAAG CAAAACGCCGACC AAT GGTCGGCGTTTTT ACGTCTCGTTGAATA TERM 5452 4306430 - 4306412 - T 100 -16 -4.68919 | opp_overlap 4306412, overlap 4306407 4306400 AAATAGAAAGCAAAA CGCCGACC AAT GGTCGGCG TTTTTACGTCTCGTT TERM 5453 4306412 - 4306430 + T 100 -16 -4.72333 | opp_overlap 4306412 4306407 4306400 AAATAGAAAGCAAAA CGCCGACC AAT GGTCGGCG TTTTTACGTCTCGTT rplI 4306905 - 4306456 - | 50S ribosomal protein L9 rpsR 4307174 - 4306947 - | 30S ribosomal protein S18 priB 4307493 - 4307179 - | primosomal replication protein N TERM 5454 4307361 - 4307376 + g 70 -10.4 -3.21099 | TTTGGCACCACGCCT GCCGGT GAAA ACCGGC TTCCTCCTGCACAGA rpsF 4307895 - 4307500 - | 30S ribosomal protein S6 yjfY 4308222 - 4308497 + | hypothetical protein TERM 5455 4308538 - 4308555 + T 100 -12.7 -5.27923 | GCCATAGTTTGCTTT GCCCCCT TCGC AGGGGGC TTTTTTATACGGTTA yagU 4309123 - 4308572 - | hypothetical protein TERM 5456 4308685 - 4308661 - G 74 -6.4 -4.58466 | opp_overlap 4308661 TCCAGAACCAGAAAA TATGCCCCAG GATTT CAGAGGCATA TTCGTCAAAAGGCAA TERM 5457 4309089 - 4309064 - G 71 -9 -3.46659 | TACACCCACAAGTAA CGCAACGCCA TAGCGG CGACGTTGCG GATCCGTTCTGACAA sgaU 4310760 - 4309906 - | L-xylulose 5-phosphate 3-epimerase TERM 5458 4310701 - 4310721 + g 100 -12.5 -4.7497 | CAGGCGTTCCAGCCA GCACTCCCC GGC GGGGAGCGC TTTTTCATAGATGCC ulaD 4311420 - 4310770 - | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 5459 4311233 - 4311267 + g 73 -9.3 -3.59979 | gap 1 GCATCGGCAATTTTG GCG-TCTGCCAGCACG ATTT TGTGCGGGTAGAGCGC TTTCAGATCGCGAAC ptxA 4311898 - 4311434 - | L-ascorbate-specific enzyme IIA component of PTS sgaB 4312213 - 4311908 - | L-ascorbate-specific enzyme IIB component of PTS ulaA 4313677 - 4312229 - | ascorbate-specific PTS system enzyme IIC yjfR 4313975 - 4315045 + | putative L-ascorbate 6-phosphate lactonase TERM 5460 4315054 - 4315095 + F 90 -13.1 -3.47762 | overlap 4315053 4315055 CCTGTAATCTGTCGT TTATACCGGATAGCGTGGA GAAG TTCGCGCTATCCGGCGTAG TATTTCCTGGCTATT TERM 5461 4315055 - 4315094 + F 86 -14.4 -2.67934 | overlap 4315054 4315053 CTGTAATCTGTCGTT TATACCGGATAGCGTGGA GAAG TTCGCGCTATCCGGCGTA GTATTTCCTGGCTAT yjfQ 4315153 - 4315908 + | transcriptional repressor UlaR yjfP 4316654 - 4315905 - | esterase yjfO 4316836 - 4317165 + | hypothetical protein TERM 5462 4317345 - 4317303 - g 80 -5.7 -4.98531 | gap 1 TGGGGAAACGAAAAA TGGAGCTGACGATGAAACAA TTAC TTGCTTCACCCTC-GCTGCA ATTAGTGACTTATCC yjfN 4317287 - 4317589 + | hypothetical protein aidB 4319346 - 4317706 - | isovaleryl CoA dehydrogenase TERM 5463 4318211 - 4318221 + g 74 -8.2 -3.9392 | opp_overlap 4318210 GGCGTAAATAAACGC GCCC ACA GGGC TTCTTTGGCATCGGC TERM 5464 4318985 - 4318973 - G 100 -10.5 -4.68724 | overlap 4318975 GCATGTAACATAAAA CGCGC CGC GCGCG CCACAAATGCGCCGG TERM 5465 4319346 - 4319383 + g 70 -9.9 -3.14132 | opp_overlap 4319350 CTGTGTCTCCCTCCA TCAATGGCAGTCACCCT TAGT ATGGTCACTGCCATGGA TTCCTGACAGAAAGA yjfC 4320473 - 4319415 - | putative synthetase/amidase yjfM 4321114 - 4320476 - | hypothetical protein TERM 5466 4320567 - 4320577 + g 80 -5.4 -5.00616 | GTAAAGCCGCCTGAA GAGT AAG ACTC TTTTTTGCCAGAACC TERM 5467 4320980 - 4320969 - G 100 -2.2 -5.80817 | gap 1, overlap 4320970 TTCAATACAAAAAAA GCGGC ACC GCC-C ATTAGCGCCAACGTT yjfL 4321522 - 4321124 - | hypothetical protein TERM 5468 4321175 - 4321153 - G 72 -5.5 -4.57341 | gap 1, overlap 4321140 4321155 AAGCTGCGTTAAAAA TACCGCCAGC CAGC GC-GGCGGTT CCCATAAACATTCCT TERM 5469 4321173 - 4321155 - G 72 -8.1 -3.90048 | gap 1, overlap 4321140 4321153 GCTGCGTTAAAAATA CCGCCAGC CAGC GC-GGCGG TTCCCATAAACATTC yjfK 4322199 - 4321540 - | hypothetical protein TERM 5470 4321711 - 4321723 + g 71 -3.4 -4.74012 | opp_overlap 4321703 AAAATTATGGACCTC CCAT TTGGC ATGG TTTTGATTTTCTACT TERM 5471 4321804 - 4321792 - G 74 -3.3 -5.00616 | opp_overlap 4321793, overlap 4321793 TTCGCTGTTAAAAAA TCGCT GCC AGCGT TTTTCCTGCCAGTTT TERM 5472 4321793 - 4321803 + g 85 -6.8 -4.73388 | opp_overlap 4321792 4321793 TCGCTGTTAAAAAAT CGCT GCC AGCG TTTTTCCTGCCAGTT TERM 5473 4322245 - 4322217 - R 72 -8.9 -3.65542 | overlap 4322215 4322218 TTTATCCTTAAAATA GTTGCCAGCCT TTTAGCG AGGCTGGCAAA AAAATTACTCGCCCT TERM 5474 4322244 - 4322218 - R 79 -12.4 -2.79004 | overlap 4322217 4322215 TTATCCTTAAAATAG TTGCCAGCCT TTTAGCG AGGCTGGCAA AAAAATTACTCGCCC yjfJ 4322948 - 4322250 - | putative alpha helical protein SBO_4274 4323306 - 4323058 - | putative IS1 encoded protein insB 4323399 - 4323902 + | IS1 ORF2 TERM 5475 4324233 - 4324252 + T 72 -6.4 -4.3534 | opp_overlap 4324234, overlap 4324234 TATAGACAAAAAAAA ACCATCCA AATC TGGATGGC TTTTCATAATTCAGA TERM 5476 4324251 - 4324234 - T 100 -9.9 -6.32216 | opp_overlap 4324233 4324234 ATAGACAAAAAAAAA CCATCCA AATC TGGATGG CTTTTCATAATTCAG TERM 5477 4324234 - 4324251 + T 71 -9.9 -3.20722 | opp_overlap 4324234, overlap 4324233 ATAGACAAAAAAAAA CCATCCA AATC TGGATGG CTTTTCATAATTCAG yjfH 4325003 - 4324272 - | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 5478 4324688 - 4324634 - G 73 -11.5 -2.82623 | opp_overlap 4324669, overlap 4324643 4324645 CTTTCGGCACAATCA CCGCATGAACACCAGCG-GCATCTGCG CTA CGCAGGCACGCGCCGAGGTT-ATGCGG ATCGGTTACACCGTC TERM 5479 4324789 - 4324819 + g 74 -6 -4.4648 | opp_overlap 4324796 CCTGGCTTCACGCGG GCGATAATGCCCTG ATG CACGGCACCGTCGC TTTTCTCGTCGAGAT TERM 5480 4324884 - 4324859 - G 76 -11.1 -3.31144 | overlap 4324860 TTGCCAGCTGGATAA CCACGCCCTGG GCTT CGAGGGCGTGA ATCAGCGGTAACAGA TERM 5481 4324883 - 4324860 - G 76 -12.4 -2.58544 | overlap 4324859 TGCCAGCTGGATAAC CACGCCCTGG GCTT CGAGGGCGTG AATCAGCGGTAACAG TERM 5482 4325177 - 4325157 - R 77 -11.2 -3.20723 | TTGTCAGCAATCTAA CCCTCTTC TGTTT GAAGAGGG TAATGATCACTCTGC vacB 4327625 - 4325184 - | exoribonuclease R TERM 5483 4327502 - 4327526 + g 75 -5.7 -4.71482 | gap 1, overlap 4327502 CAATGTGCAGTTCTA CC-GCCAGCT CATCAC GGCTGGCCGG TTTTTCACGTTTGGT yjeB 4328089 - 4327664 - | transcriptional repressor NsrR TERM 5484 4327890 - 4327904 + g 74 -2.7 -5.00616 | overlap 4327891 CTCGCCGGTTTACCC AGGCG AATGC CGCCA TTTTTTCCACGAACA purA 4329592 - 4328294 - | adenylosuccinate synthetase TERM 5485 4329077 - 4329109 + g 72 -5.6 -4.56775 | opp_overlap 4329073 4329077, overlap 4329074 GTAGTAGTTAACCAA CTGGAAGTTGTGAT ATTCC ATCACTTCTTTCAG TTTTTCAGCGAAGGT TERM 5486 4329222 - 4329232 + g 74 -8.2 -3.86194 | overlap 4329221 4329228 GTGCCGATCGCTTTC GCGC CAC GCGC TTTCTCACGCGCGTT yjeT 4329893 - 4329696 - | hypothetical protein TERM 5487 4329918 - 4329946 + r 87 -9.6 -4.19678 | gap 1, opp_overlap 4329919, overlap 4329919 TTATAGAAAAAGAAA ACCACCGACATCC CTGA GGATG-CGGTGGC TTTATTGACCTGTAC TERM 5488 4329945 - 4329919 - R 100 -13.1 -5.38839 | gap 1, opp_overlap 4329918 4329919 TATAGAAAAAGAAAA CCACCGACATCC CTGA GGATG-CGGTGG CTTTATTGACCTGTA TERM 5489 4329919 - 4329945 + r 82 -13.1 -3.11325 | gap 1, opp_overlap 4329919, overlap 4329918 TATAGAAAAAGAAAA CCACCGACATCC CTGA GGATG-CGGTGG CTTTATTGACCTGTA hflC 4330979 - 4329975 - | FtsH protease regulator HflC hflK 4332241 - 4330982 - | FtsH protease regulator HflK TERM 5490 4331010 - 4331029 + g 81 -12.8 -3.1994 | CGCTGGTAGTCGTTA CGCTGCGC GTTG GCGCGGCG TTGGTCCATAATATC TERM 5491 4331229 - 4331242 + g 75 -5.3 -4.69664 | ACCAGCACTTTGCGG GTGTT ACCC AACAC TTTTTCCATCGTCTC TERM 5492 4331924 - 4331935 + g 70 -7.2 -4.03811 | opp_overlap 4331912 AAAGCGTGTTACCAC GCCG CGTT CGGC TTCTTTAATGGTATA hflX 4333607 - 4332327 - | putative GTPase HflX TERM 5493 4332563 - 4332599 + g 90 -9.5 -4.4768 | overlap 4332586 AAAGCTGTGGTATCC CCGCTCCG-GTCTGTGC GGAAA GC-CAGACACGGATCGG TTTGTTCTCTTCGTC TERM 5494 4332714 - 4332726 + g 71 -3.3 -4.77165 | TTCAAGAACCGTATT CACCG CTT CGATG TTTTCTTGTACACGC hfq 4333992 - 4333684 - | RNA-binding protein Hfq TERM 5495 4333761 - 4333771 + g 72 -8.2 -3.78778 | overlap 4333753 AGTTACTGCTGGTAC CGCC ACC GGCG TTGTTACTGTGATGA TERM 5496 4333964 - 4333937 - G 81 -12.8 -3.14528 | gap 1, opp_overlap 4333936 4333932, overlap 4333929 ATAGAAACTGGAACA CGTTCCCG-ACGC AGT GCGTTCAGGAACG GATCTTGTAAAGATT miaA 4335028 - 4334078 - | tRNA delta(2)-isopentenylpyrophosphate transferase mutL 4336868 - 4335021 - | DNA mismatch repair protein TERM 5497 4335350 - 4335362 + g 74 -3.3 -4.91109 | TACCCAATTCCGCCA GGGCA GAC TGCGC TTTTTCTAATGCCGA TERM 5498 4335578 - 4335611 + g 85 -7.3 -4.78661 | overlap 4335579 CAAAACTCTGACTGT TCGCCGCAAGTGCAG GTTC CTGCGGTTCCGGCGC TTTTAATTTTTGCAT TERM 5499 4335579 - 4335610 + g 78 -10.8 -3.4557 | overlap 4335578 AAAACTCTGACTGTT CGCCGCAAGTGCAG GTTC CTGCGGTTCCGGCG CTTTTAATTTTTGCA TERM 5500 4335797 - 4335807 + g 77 -8.2 -4.09685 | opp_overlap 4335783 AGTGATTGCGCCCCG CCGC CAC GCGG TTTTCCGGAATGGAA TERM 5501 4336646 - 4336673 + g 83 -5.4 -5.14563 | overlap 4336649 TTTTACTGGTGGCAT GACGAGCCAGCG CCAG CGCCAGCTCATC TTTTTTGATACCGCA amiB 4338215 - 4336878 - | N-acetylmuramoyl-l-alanine amidase II TERM 5502 4337094 - 4337135 + g 70 -6 -4.27886 | gap 3, opp_overlap 4337105 4337108 TACTGACGGGATATC CGGCGAACGCAGAACGC-CGA GAC TCGCGTGTTCTG-GT-CGGCG TTTATGTATTTCGCC TERM 5503 4337891 - 4337901 + g 72 -6.8 -4.1899 | GCCGCTTCACCGCTT CGGT TTT ACCG TTTTCGGTAAGATCG yjeE 4338695 - 4338234 - | putative ATPase yjeF 4340214 - 4338667 - | hypothetical protein TERM 5504 4339671 - 4339685 + gH 82 -11.4 -3.53012 | CGTTGATCACCGCGC CTGGCG TAG CGCCAG TTTCAGCCAGCAGGC TERM 5505 4340506 - 4340520 + Gr 73 -10 -3.32844 | opp_overlap 4340505 4340504 GAAAAACCCCAAACT CGGCTA TGT TAGCCG TTATGCGCTGGGCCG yjeS 4340213 - 4341352 + | hypothetical protein TERM 5506 4341432 - 4341410 - TR 76 -4.9 -4.78753 | overlap 4341399 4341412 TCAAGACGAATAAAA TCGTCAAGT GATCG ACTCGACAA AACGGAATCTTGATT TERM 5507 4341655 - 4341671 + Tr 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 5508 4341766 - 4341782 + Tr 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 5509 4341877 - 4341893 + Tr 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 5510 4342052 - 4342065 + Tr 72 -6.7 -4.28049 | GCGATTGGGTGGTCT GTGCT TTGC AGCAC TTTTCAAATTTTGGA TERM 5511 4342110 - 4342126 + Tr 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 5512 4342241 - 4342261 + Tr 80 -5.5 -4.9792 | overlap 4342243 TTCCCTCTGCAACCC CCCAAAAAA GTT TTTTTTGCG TTTTTATCTCAAGTG yjeR 4342908 - 4342363 - | oligoribonuclease TERM 5513 4343531 - 4343491 - g 74 -11.1 -3.19509 | overlap 4343489 4343487 4343485 4343492 4343527 GCTCAACAAGATAGA CCTGCTGGACGACGAAGGC ATG GCGTTCGTCAACGAGCAGA TGGATATCTACCGCA TERM 5514 4343530 - 4343492 - g 76 -12.4 -2.51223 | overlap 4343491 4343489 4343487 4343485 4343527 CTCAACAAGATAGAC CTGCTGGACGACGAAGGC ATG GCGTTCGTCAACGAGCAG ATGGATATCTACCGC yjeQ 4343003 - 4344055 + | ribosome-associated GTPase psd 4344152 - 4345120 + | phosphatidylserine decarboxylase TERM 5515 4347959 - 4347938 - g 72 -5.7 -4.56775 | ATCCTGTTCGAAAAA CCGATTCGC ATTG GCGATACGG TGACAATTCGCGATC yjeP 4345142 - 4348465 + | hypothetical protein TERM 5516 4348509 - 4348474 - T 74 -10.6 -3.21912 | gap 1, opp_overlap 4348470 4348487 TTTGTAATGCATGAA GCTGCCAAATGATGTCA ACG TGGC-TCATTTAGCAGC TTAACATCATCTTCA TERM 5517 4348566 - 4348605 + T 100 -14.5 -3.8647 | gap 1, opp_overlap 4348575 TCCATACGCATTACT TCCTGACAACTCATCGCC GGAGA GACGATGAGTTG-CAGGA TTTCATATGATCAGT TERM 5518 4348597 - 4348575 - T 71 -9.9 -3.2963 | opp_overlap 4348566 ATTACTTCCTGACAA CTCATCGCC GGAGA GACGATGAG TTGCAGGATTTCATA insB 4349435 - 4348932 - | IS1 ORF2 TERM 5519 4349726 - 4349712 - R 78 -5.8 -4.91084 | CATTTAATAACAAAA TAGTAA TGC TTACTA ACAGCAATACTAAAT TERM 5520 4350211 - 4350232 + r 79 -3 -5.34555 | opp_overlap 4350204 4350211 4350213, overlap 4350213 AGTAAAGATCATCAA TATGAGTC CTATCA GACTCATC TTTTTTATCGTGTGA yjeA 4351448 - 4350471 - | lysyl-tRNA synthetase TERM 5521 4350644 - 4350632 - G 70 -10.5 -2.71712 | overlap 4350631 GGTGCTGCGGCAAAC CGCGC GTC GCGCG CTTACGGTTATCTTG TERM 5522 4351381 - 4351366 - G 70 -4.6 -4.51743 | overlap 4351367 CGATCAGCAAAGAAA CGACGG ATCT CCGCCA TAATCGCCGCGCGTT TERM 5523 4352706 - 4352684 - g 72 -12 -2.51888 | opp_overlap 4352684 4352686 4352689, overlap 4352667 4352681 GCGTAAAGGCAACAC CATCTCCACG CCG CGTGGCGATG TGGTTTATCTCGACT TERM 5524 4352684 - 4352706 + G 75 -12 -3.06686 | opp_overlap 4352667 4352684 4352681, overlap 4352686 4352689 GCGTAAAGGCAACAC CATCTCCACG CCG CGTGGCGATG TGGTTTATCTCGACT TERM 5525 4352689 - 4352709 + G 77 -8.9 -4.06491 | opp_overlap 4352684 4352681, overlap 4352686 4352684 AAGGCAACACCATCT CCACGCCGC GTG GCGATGTGG TTTATCTCGACTTGC TERM 5526 4352770 - 4352745 - g 79 -2.6 -5.24129 | gap 1, overlap 4352747 CTCGGCGAGAAAAAA CTGCATGAACG TCTGC CGTTCAT-CTG CGAACTGGCGAAAGC frdA 4351773 - 4353581 + | fumarate reductase flavoprotein subunit frdB 4353574 - 4354308 + | fumarate reductase iron-sulfur subunit frdC 4354319 - 4354714 + | fumarate reductase subunit C frdD 4354725 - 4355084 + | fumarate reductase subunit D TERM 5527 4355126 - 4355102 - f 93 -12.7 -3.75629 | opp_overlap 4355104, overlap 4355103 TATCGCCAATGTAAA TCCGGCCCGCC TAT GGCGGGCCGTT TTGTATGGAAACCAG TERM 5528 4355125 - 4355103 - f 93 -16.2 -2.85056 | opp_overlap 4355104, overlap 4355102 ATCGCCAATGTAAAT CCGGCCCGCC TAT GGCGGGCCGT TTTGTATGGAAACCA TERM 5529 4355104 - 4355124 + F 100 -19.7 -4.52589 | opp_overlap 4355103 4355102 TCGCCAATGTAAATC CGGCCCGCC TAT GGCGGGCCG TTTTGTATGGAAACC ampC 4355147 - 4356280 + | beta-lactamase TERM 5530 4356291 - 4356308 + F 95 -11.3 -4.46581 | AGTAAAATTTCATCG GGTCCGA ATTT TCGGACC TTTTCTGCGCTTTTC blc 4356369 - 4356902 + | outer membrane lipoprotein Blc sugE 4357366 - 4356899 - | SugE TERM 5531 4357388 - 4357357 - G 100 -8 -5.26316 | opp_overlap 4357361, overlap 4357361 CTATCGCAGAAAAAA CAAACGGCACGACA CAGC TGTCGTACCGTTAT TGCTTATTGCTATTG TERM 5532 4357361 - 4357384 + g 86 -11 -3.90559 | opp_overlap 4357357 4357361 CGCAGAAAAAACAAA CGGCACGACA CAGC TGTCGTACCG TTATTGCTTATTGCT TERM 5533 4357384 - 4357361 - G 100 -13.2 -5.13354 | opp_overlap 4357361, overlap 4357357 CGCAGAAAAAACAAA CGGCACGACA CAGC TGTCGTACCG TTATTGCTTATTGCT TERM 5534 4357827 - 4357796 - R 90 -13 -3.65046 | overlap 4357800 CTCTGACCTGAATAA GTGATGGTGCAGCC TGCA GGCCGCACCACAAC CGCATTACTTCACGC TERM 5535 4357823 - 4357800 - R 86 -14.6 -2.66106 | overlap 4357796 GACCTGAATAAGTGA TGGTGCAGCC TGCA GGCCGCACCA CAACCGCATTACTTC efp 4358398 - 4357832 - | elongation factor P TERM 5536 4359458 - 4359437 - g 78 -7.9 -4.30978 | GCGAACCCAGCAAAA CGCCGCTGG ATCT CCAGCTACG CCAGCAGTTACTGAT yjeK 4358440 - 4359489 + | hypothetical protein yjeJ 4359863 - 4360732 + | hypothetical protein yjeI 4361321 - 4360935 - | hypothetical protein TERM 5537 4361396 - 4361373 - R 100 -12.4 -5.50723 | opp_overlap 4361373 TGACCAAAAGAAAAA CCCCCAGACA TTTC TGCCCGGGGG TTTGTTTATTTCTGC TERM 5538 4361373 - 4361396 + r 84 -8 -4.83246 | opp_overlap 4361373 TGACCAAAAGAAAAA CCCCCAGACA TTTC TGCCCGGGGG TTTGTTTATTTCTGC groEL 4363072 - 4361426 - | chaperonin GroEL TERM 5539 4362061 - 4362089 + g 76 -9.5 -3.72374 | overlap 4362059 GGATTGCAGCTTCTT CACCCACGCCATC AAT GATGGTGGTGGTG TCTTTGTTGATCACA groES 4363409 - 4363116 - | co-chaperonin GroES TERM 5540 4363720 - 4363706 - g 70 -7.1 -4.10744 | opp_overlap 4363714 GGACTCAAACAAGAA CTGGG GCTGG CCCAG GGCATTGGCCTGCTA TERM 5541 4363811 - 4363823 + G 77 -6.9 -4.56314 | opp_overlap 4363804, overlap 4363812 GGCAATAACAGCCTG TGGGC GTG GCCCG TTTTGATTATCTTAG yjeH 4363685 - 4364941 + | inner membrane protein YjeH TERM 5542 4364948 - 4364916 - T 78 -4.8 -5.0925 | opp_overlap 4364916 4364945 TGCCAAAACGAAAAA CGCCGGAAAATG GCATAATCA CATAATCCGGCG TTTCGACATTAATCC fxsA 4365433 - 4364957 - | FxsA TERM 5543 4365906 - 4365891 - g 71 -2.6 -4.92757 | gap 1, opp_overlap 4365891, overlap 4365886 TCAGCAACAACAAAA TCAGTGA TAT TC-CTGA ATTTGTTCGCGGTAT TERM 5544 4366341 - 4366329 - g 74 -7.7 -4.13282 | overlap 4366320 AGGACATCCTGAAAA TGGGT CGT ACCCA GCTGCAGGACGCAGT aspA 4365725 - 4367206 + | aspartate ammonia-lyase TERM 5545 4367255 - 4367230 - f 100 -11.9 -4.59342 | opp_overlap 4367233, overlap 4367233 GGTAGTACAAATAAA GAAGGCACGTC AGAT GACGTGCCTTT TTTCTTGTGAACAGT TERM 5546 4367252 - 4367233 - f 100 -13.6 -4.39652 | opp_overlap 4367233, overlap 4367230 AGTACAAATAAAGAA GGCACGTC AGAT GACGTGCC TTTTTTCTTGTGAAC TERM 5547 4367233 - 4367252 + F 100 -13.6 -5.55769 | opp_overlap 4367233 4367230 AGTACAAATAAAGAA GGCACGTC AGAT GACGTGCC TTTTTTCTTGTGAAC dcuA 4367324 - 4368625 + | anaerobic C4-dicarboxylate transporter TERM 5548 4368655 - 4368634 - f 80 -12.9 -2.56164 | opp_overlap 4368635, overlap 4368633 GCTGTAATGATCAAT CGCGGGGCG TTCA CGCCCCGCT TTCTTTCCCGCCGAC TERM 5549 4368635 - 4368654 + F 100 -16.4 -4.41348 | opp_overlap 4368634 4368633 CTGTAATGATCAATC GCGGGGCG TTCA CGCCCCGC TTTCTTTCCCGCCGA dipZ 4369056 - 4370753 + | thiol:disulfide interchange protein precursor yjdC 4370790 - 4371365 + | putative transcriptional regulator TERM 5550 4371514 - 4371498 - f 73 -10.9 -2.62616 | opp_overlap 4371497 4371496 4371493 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 5551 4371560 - 4371579 + F 100 -13.6 -4.98531 | opp_overlap 4371560 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 5552 4371579 - 4371560 - f 90 -13.6 -3.31196 | opp_overlap 4371560 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 5553 4371959 - 4371946 - g 70 -5.2 -4.386 | GAAGCTCGTACAAAA CGGG ATGAGG CCCG AAAACTGATTTCGGA SBO_4322 4371745 - 4372749 + | putative P4-type integrase SBO_4323 4373255 - 4372800 - | hypothetical protein SBO_4324 4374175 - 4373153 - | IS911 ORF2 TERM 5554 4373744 - 4373755 + gr 77 -5.8 -4.63218 | opp_overlap 4373740 CGAGAACGACATGGC CCAG CCCA CTGG TTTTATTGCGAACAG TERM 5555 4374096 - 4374116 + gr 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 5556 4374892 - 4374864 - R 75 -6.1 -4.45151 | opp_overlap 4374863 AATAGCTAACGAAAA TGGCCTGAT GCGATATGTTT ATCAGGCCA CGTCTTAATGTAATG yjdF 4375609 - 4374980 - | hypothetical protein fumB 4377378 - 4375732 - | fumarase B TERM 5557 4376713 - 4376732 + g 75 -7.2 -4.36914 | gap 1 GTACGGCGGGCAGGC TGCAGTACC GAG GGTAC-GCA TTTTCTCGACGAGGA TERM 5558 4376733 - 4376749 + g 73 -3.7 -4.81249 | overlap 4376734 TACCGAGGGTACGCA TTTTCTC GAC GAGGAAG TTTTTCAGTTTGCCG TERM 5559 4377448 - 4377417 - R 76 -8.7 -4.13767 | opp_overlap 4377441 TTTGTTATTCGAAAA TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA AGTGCATTTATAAGA dcuB 4378796 - 4377456 - | anaerobic C4-dicarboxylate transporter TERM 5560 4377892 - 4377903 + g 74 -2.2 -5.0538 | GCGATCATACCGGAA CGGA AGAC TTCG TTTTTTGAGATAGAC yjdG 4380086 - 4379367 - | DNA-binding transcriptional activator DcuR yjdH 4381714 - 4380083 - | sensory histidine kinase DcuS TERM 5561 4380532 - 4380519 - G 74 -2.3 -5.14563 | TTGCTGATTAAAAAA CCAGC GATA ACCGG AGATTTGATCTTACC TERM 5562 4381473 - 4381486 + g 88 -5.2 -5.24129 | GCGATGGCCTGGATT CCGC TCTCCT GCGG TTTTTTCTGCAAGCC yjdI 4381895 - 4382125 + | hypothetical protein yjdJ 4382137 - 4382409 + | hypothetical protein SBO_4332 4382889 - 4382692 - | putative IS1 encoded protein insB 4382982 - 4383485 + | IS1 ORF2 TERM 5563 4383506 - 4383559 + T 71 -9.7 -3.20403 | gap 1, overlap 4383501 4383504 4383519 4383524 AGTCATTACCCTGGT TGTCTGGAGATTCAGGGGGCCAGTCT ACT GGATTTG-CCCCTATATTTCCAGACA TCTGTTATCACTTAA SBO_4334 4384450 - 4383545 - | insertion element IS2 transposase InsD imm 4386466 - 4385273 - | putative membrane transport protein SBO_4335 4384730 - 4385323 + | hypothetical protein TERM 5564 4386524 - 4386575 + FH 86 -9.2 -4.39166 | gap 1, opp_overlap 4386516 4386527 4386530, overlap 4386527 4386537 AATTAATTTATCTGA CAATAACATTTATTGTTGATAATGA GAA TCATTATCGAC-ATAATTGTTATTA TTTTACTGTGTGGGA TERM 5565 4386527 - 4386572 + FH 91 -10.9 -4.30909 | gap 1, opp_overlap 4386516 4386527 4386530, overlap 4386524 4386537 TAATTTATCTGACAA TAACATTTATTGTTGATAATGA GAA TCATTATCGAC-ATAATTGTTA TTATTTTACTGTGTG TERM 5566 4386537 - 4386563 + FH 78 -11.8 -3.08006 | opp_overlap 4386516 4386530 4386527, overlap 4386527 4386524 GACAATAACATTTAT TGTTGATAATGA GAA TCATTATCGACA TAATTGTTATTATTT TERM 5567 4386642 - 4386623 - g 82 -7.8 -4.56597 | overlap 4386624 CTGCCCTCTGAAAAA CCAGCCAC AGAT GTGGCTGC GCAGTGCTTCCTGAA TERM 5568 4386641 - 4386624 - g 80 -11.3 -3.33744 | overlap 4386623 TGCCCTCTGAAAAAC CAGCCAC AGAT GTGGCTG CGCAGTGCTTCCTGA TERM 5569 4386735 - 4386714 - g 81 -13.1 -2.5547 | overlap 4386700 4386713 ACCCGCCAGACGAAT TGCTCATCC CGCT GGATGAGCA GAAATCGCTCCATTT TERM 5570 4387127 - 4387138 + G 70 -5.8 -4.19817 | overlap 4387116 ATGGCACCCCACTTC CCAC TGCG GTGG TTTTCGGTGGATAAA iucA 4386545 - 4388326 + | siderophore biosynthesis protein TERM 5571 4389230 - 4389250 + G 85 -11.9 -3.61715 | AAGCGCTCGCGCATG GTGATGGCG GAT CGTCATCAC TTCTTCACGGAGGTC iucB 4388327 - 4389274 + | siderophore biosynthesis protein TERM 5572 4390851 - 4390861 + G 70 -4.6 -4.4727 | overlap 4390846 TCCACAAATGGCAGA GCGT TTT GCGC TTTTCTCACTCTTCA iucC 4389274 - 4391016 + | siderophore biosynthesis protein TERM 5573 4391114 - 4391128 + G 71 -2.8 -4.7373 | GAACTGTCTCTTCTT TGACGA ACA TCCTCA TTTTTCCTGGCATCC TERM 5574 4392315 - 4392297 - g 81 -4.4 -5.03314 | opp_overlap 4392299 4392306, overlap 4392298 4392299 GGCAGCCGGAAAAAA CCGCAGCC GGA GGCTGCTT CTTTAACTCACTATA TERM 5575 4392299 - 4392313 + G 90 -11.4 -3.9693 | opp_overlap 4392298 4392297 4392299, overlap 4392306 CAGCCGGAAAAAACC GCAGCC GGA GGCTGC TTCTTTAACTCACTA TERM 5576 4392313 - 4392299 - g 73 -11.4 -2.76422 | opp_overlap 4392299 4392306, overlap 4392298 4392297 CAGCCGGAAAAAACC GCAGCC GGA GGCTGC TTCTTTAACTCACTA iucD 4391013 - 4392350 + | lysine:N6-hydroxylase iutA 4392353 - 4394551 + | putative ferric siderophore receptor TERM 5577 4394575 - 4394622 + T 82 -12.9 -2.8547 | opp_overlap 4394586 4394589, overlap 4394586 4394589 CTTTTGCAACAAGGG TATGCTGTAAACAACATGGTC CTTGGT GGCCATGTTGTTTACAGCCAG TATAATATACAGCCT TERM 5578 4394586 - 4394611 + T 75 -9.8 -3.54129 | opp_overlap 4394586 4394589, overlap 4394575 4394589 AGGGTATGCTGTAAA CAACATGGTC CTTGGT GGCCATGTTG TTTACAGCCAGTATA TERM 5579 4394827 - 4394858 + T 76 -7.5 -4.258 | gap 2 AGGATGATCTGCGCG TAAGCGTC-A-ACGG AGCA CCGTATTGACGCTTA TTTATTGGTGAGTGC SBO_4342 4395851 - 4394856 - | putative protein encoded within IS SBO_4344 4396259 - 4395921 - | putative protein encoded within IS TERM 5580 4396444 - 4396475 + GH 75 -5.2 -4.60255 | gap 1, overlap 4396444 4396445 ATGAGGTATTTTTGA T-TCATGGCCGTTTT TAT AATCCGGCCATGACA TTTTTACAACATTGT TERM 5581 4396445 - 4396473 + GH 71 -10.3 -2.60776 | overlap 4396444 4396444 TGAGGTATTTTTGAT TCATGGCCGTTTT TAT AATCCGGCCATGA CATTTTTACAACATT SBO_4343 4396113 - 4396727 + | hypothetical protein SBO_4345 4396830 - 4397105 + | IS629 ORF1 TERM 5582 4397425 - 4397413 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_4346 4397105 - 4397992 + | IS629 ORF2 TERM 5583 4399158 - 4399135 - T 100 -7.4 -5.66684 | overlap 4399137 GAATTGATAAAAAAA CGCCAGCA ACACATAG TGCCGGCG GAGGGAATACCCCAT SBO_4347 4399566 - 4399357 - | putative IS1 encoded protein insB 4399641 - 4400144 + | IS1 ORF2 SBO_4349 4401717 - 4401388 - | IS2 ORF2 SBO_4350 4402226 - 4401705 - | IS2 ORF2 SBO_4351 4402615 - 4402250 - | insertion sequence 2 OrfA protein TERM 5584 4403197 - 4403183 - g 74 -2.8 -4.91109 | CGGCTATGAGAAAAA GCTG ACTAACG CAGC CGCCAGTGTTTCTGT SBO_4352 4403070 - 4405160 + | bifunctional enterobactin receptor/adhesin protein TERM 5585 4405232 - 4405192 - f 86 -13.3 -3.33492 | opp_overlap 4405192 TCACTGACGGTAGAA TACGTTGCCACTGCAACTC CTG GCGGAACAGTGGCAACGTA TTAGGTTAAGTGCAT TERM 5586 4405192 - 4405232 + F 77 -11.1 -3.19371 | opp_overlap 4405192 TCACTGACGGTAGAA TACGTTGCCACTGCAACTC CTG GCGGAACAGTGGCAACGTA TTAGGTTAAGTGCAT TERM 5587 4405458 - 4405472 + G 85 -11.4 -3.58269 | opp_overlap 4405451 TGATTACACTGATCA CGTGGC GTA GCCACG TTTCCGGCTCGATTC SBO_4353 4405394 - 4405618 + | hypothetical protein TERM 5588 4406366 - 4406346 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 5589 4406718 - 4406707 - g 77 -5.8 -4.63218 | opp_overlap 4406712 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_4354 4406287 - 4407126 + | IS911 ORF2 SBO_4355 4407120 - 4407602 + | hypothetical protein TERM 5590 4407679 - 4407694 + T 93 -6.8 -5.76633 | opp_overlap 4407675 4407679 CCGTATGCAAATCGA GTCGCT CAAG AGCGGC TTTTTTTGTGTCTGA SBO_4356 4408331 - 4408155 - | putative IS1-encoded protein insB 4408424 - 4408927 + | IS1 ORF2 SBO_4358 4410188 - 4409316 - | hypothetical protein yjhS 4411380 - 4410400 - | hypothetical protein TERM 5591 4411437 - 4411418 - R 76 -12.1 -2.69246 | opp_overlap 4411411 4411410, overlap 4411413 4411410 GATAAATTGATAGCA GGGCCCC TTTACT GGGGCCC TGAAGCGTTAGTTTT yjhT 4412659 - 4411445 - | hypothetical protein yjhA 4413296 - 4412571 - | hypothetical protein TERM 5592 4414706 - 4414683 - H 76 -4.6 -4.94902 | overlap 4414704 TAATCAGGATAAAAA TGTTGGATTA TTGC TAACCCAGCA CAGCTAGTGCGCGTC TERM 5593 4414978 - 4414962 - g 88 -2.2 -5.53991 | overlap 4414964 CATCGATTAAAAAAA GGCTTT TCAAC AACGCC CCCGCTATTGAATAA TERM 5594 4415037 - 4415063 + G 95 -9.4 -4.85599 | AGTATCCGTACTTCG TACCCGCATGCT GAG AGCGAGTGGGTA TTTTTATCGCGTAAG fimB 4414743 - 4415345 + | tyrosine recombinase TERM 5595 4415325 - 4415337 + F 86 -9.1 -4.3898 | opp_overlap 4415322 AGAGCCAGAGGACGA CAGCG TCA CGCTG TTTTATAGAGATAGT TERM 5596 4415658 - 4415673 + F 83 -4 -5.38839 | opp_overlap 4415653, overlap 4415660 AATGAAAATAGATGT TGTCAC ATCA GTGATA TTTTATTTTTGTATG TERM 5597 4415708 - 4415737 + F 100 -10.9 -5.10064 | gap 1 TTAATGTAATTGACT GATAGCCACATCAC TTC GTG-TGTGGTTATC TTTTTATCTATTGGG fimE 4415823 - 4416419 + | tyrosine recombinase TERM 5598 4416478 - 4416458 - f 71 -6.9 -4.1348 | AAAAAATAAATACAA GACAATTGG GGC CAAATTGTC CATATCATAAATAAG fimA 4416896 - 4417444 + | major type 1 subunit fimbrin TERM 5599 4417984 - 4418027 + GF 76 -8.9 -3.83347 | gap 2 CCAAATATCGTGCTA CCGGGCGTTGGGTTACTGGCG GCAT CGCCAAT-GCCCAG-GCCTGG TTCTCTTTAACCTAT fimI 4417410 - 4418048 + | fimbrial protein TERM 5600 4418253 - 4418241 - g 77 -6.3 -4.62069 | CCGGCAGGGCAAAAA CAAGT GCA ACTTG CCGTGACAAATAATG TERM 5601 4418396 - 4418376 - g 88 -2.6 -5.54192 | opp_overlap 4418378, overlap 4418378 ATGAAGGGAAAAAAA GAGAATAC CTTGC GTATTCTT GATGCAACAAATAAC TERM 5602 4418394 - 4418378 - g 70 -5.2 -4.40173 | opp_overlap 4418378, overlap 4418376 GAAGGGAAAAAAAGA GAATAC CTTGC GTATTC TTGATGCAACAAATA fimC 4418085 - 4418810 + | periplasmic chaperone TERM 5603 4420846 - 4420834 - f 79 -10.5 -3.56643 | GCTATAGCGTGCAAA CCGGC TAT GCCGG GGGAGGCGATGGTAA TERM 5604 4421586 - 4421615 + G 82 -12.9 -2.87931 | GTAAGTCGCGTTTTG GCTGCGGATAGCA CGAT TACTATCCGCGGC TATGTCAGAGATAAC fimF 4421523 - 4422053 + | fimbrial morphology fimG 4422066 - 4422569 + | fimbrial morphology TERM 5605 4422695 - 4422665 - g 70 -6.9 -4.07885 | gap 1, opp_overlap 4422687 4422689 CATTCGCCTGTAAAA CCGCCAAT-GGTAC TGCT ATCCCTATTGGCGG TGGCAGCGCTAATGT fimH 4422589 - 4423383 + | minor fimbrial subunit SBO_4371 4424310 - 4423423 - | IS629 ORF2 TERM 5606 4423990 - 4424002 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_4372 4424576 - 4424310 - | IS629 ORF1 TERM 5607 4425001 - 4425032 + H 100 -16 -4.19746 | gap 1, overlap 4425004 4425005 TTTAGACTTTGTCAT CAGTCAGAGCCTGCC ATT GGCAGGCTCTGG-TG TTCTTTTACGCTACC TERM 5608 4425004 - 4425030 + H 100 -18.8 -3.69506 | overlap 4425001 4425005 AGACTTTGTCATCAG TCAGAGCCTGCC ATT GGCAGGCTCTGG TGTTCTTTTACGCTA TERM 5609 4425005 - 4425029 + H 100 -20.1 -2.80981 | overlap 4425004 4425001 GACTTTGTCATCAGT CAGAGCCTGCC ATT GGCAGGCTCTG GTGTTCTTTTACGCT TERM 5610 4426641 - 4426611 - g 70 -6.9 -4.0098 | gap 1 GCGGAAGGCAAAGAA GACC-TGATCCCGA TGCG TCCGGACCACGGTC ATCAGATGCTGGACG uxuA 4425582 - 4426766 + | mannonate dehydratase TERM 5611 4426773 - 4426797 + F 100 -15 -3.58329 | opp_overlap 4426769, overlap 4426769 AGCCGTTAATATCCA CCGGCATGGC TGCGC GCCGTGCCGG TTCCTTCTTCCTTGC TERM 5612 4427080 - 4427069 - g 86 -5.8 -5.15117 | GAAAACCTGAAAAAA CAGC AACT GCTG TACACCGTAGCGGAA TERM 5613 4427113 - 4427099 - g 72 -4.9 -4.62336 | ACCGTAGCGGAAAAA GGCGC AGAAA GCACC GAGCTGAAAATTATC uxuB 4426847 - 4428307 + | D-mannonate oxidoreductase TERM 5614 4428332 - 4428363 + F 100 -12.5 -4.94243 | TACCCTACAGACTTA CTGGTCAATCAAA CTGATA TTTGGTTGACCAG TTTTCGTTTTTTTGC uxuR 4428522 - 4429295 + | DNA-binding transcriptional repressor UxuR TERM 5615 4429309 - 4429333 + T 83 -9.3 -4.2528 | opp_overlap 4429309, overlap 4429317 4429322 4429324 4429325 GACTGATTATGATAA GCGCAAGGG TAAACGT TCCTTGCGC TTTCTTAAATTAAGA yjiC 4430266 - 4429436 - | hypothetical protein TERM 5616 4430547 - 4430561 + H 72 -5.8 -4.40333 | GTATTTTTGATGTAT TTGATA TGT TATCAA TTTATATTATTTACA yjiD 4430929 - 4431330 + | hypothetical protein yjiE 4432234 - 4431323 - | putative DNA-binding transcriptional regulator iadA 4433471 - 4432299 - | isoaspartyl dipeptidase TERM 5617 4433306 - 4433284 - G 77 -6.2 -4.71426 | overlap 4433285 4433286 TGTTGATCAATAAAA CCTGGGCAGA GGA TCTGCCCACT GAGATCGACAACCGT TERM 5618 4433305 - 4433285 - G 74 -9.7 -3.42374 | overlap 4433284 4433286 GTTGATCAATAAAAC CTGGGCAGA GGA TCTGCCCAC TGAGATCGACAACCG TERM 5619 4433304 - 4433286 - G 81 -13.2 -2.64942 | overlap 4433285 4433284 TTGATCAATAAAACC TGGGCAGA GGA TCTGCCCA CTGAGATCGACAACC yjiG 4433945 - 4433484 - | hypothetical protein TERM 5620 4433658 - 4433642 - G 70 -6.5 -4.25104 | opp_overlap 4433641 TCGCGGGCAGTAAAA CGGTGAC ATC GTGACCG GTTAATGCGCCAGCG TERM 5621 4433897 - 4433922 + g 70 -4.7 -4.57569 | opp_overlap 4433886 4433890 4433887 TAAAGCCACGGCGCG CGCCATCGATA AACA TATCCATGACG TTTTTGCGGACCTGA SBO_4381 4434289 - 4433942 - | hypothetical protein TERM 5622 4434627 - 4434638 + H 95 -3 -5.90231 | opp_overlap 4434627 CTTGTTGTGTCATAA CAAT CCCC ATTG TTTTTTTGTGTTTGT yjiI 4434874 - 4435272 + | hypothetical protein yjiJ 4436614 - 4435442 - | putative transport protein TERM 5623 4435542 - 4435502 - G 76 -7.5 -4.25458 | gap 2, opp_overlap 4435528, overlap 4435489 4435505 AAGCGCAGCAATAAA CAACGCC-GCC-GCGCCGC AGAGA GTGGCGCCGGCAAGCGCCG ATGTTCCATTGCCGA TERM 5624 4435539 - 4435505 - G 76 -7.8 -4.24413 | gap 2, opp_overlap 4435528, overlap 4435489 4435502 CGCAGCAATAAACAA CGCC-GCC-GCGCCGC AGAGA GTGGCGCCGGCAAGCG CCGATGTTCCATTGC yjiK 4437653 - 4436682 - | hypothetical protein TERM 5625 4437060 - 4437042 - GR 71 -2.4 -5.00616 | TTTCTCTTTAAAAAA CCAGAA AGTGTGA TCCTGG CGAGAATAAGCTAAC SBO_4385 4437864 - 4437607 - | hypothetical protein TERM 5626 4438567 - 4438550 - R 84 -10.5 -3.84246 | GTTGGAACGAGGAAA CGGCGCG TAAT CACGCCG TCTGCCAGTAAGATC yjiM 4439812 - 4438904 - | hypothetical protein TERM 5627 4439256 - 4439270 + g 72 -5.6 -4.57073 | overlap 4439257 TAAAAATTGGCCAGT GCGCGA CGT TCGCGG TTTTTCAGCGCAATG TERM 5628 4439440 - 4439451 + g 82 -3 -5.27023 | GCTTAAACTCCGCCA TGTA TTCA TACA TTTTCTTTTTGCCGT yjiN 4441187 - 4439907 - | hypothetical protein TERM 5629 4441162 - 4441145 - G 80 -11.3 -3.32233 | opp_overlap 4441143, overlap 4441143 4441141 TAAGCAGTAAAGAGA GCGCCAA CATT TTGGCGC GTCTGAGTTCAATGA yjiO 4442460 - 4441228 - | putative transport protein TERM 5630 4441521 - 4441511 - G 72 -6.8 -4.17516 | overlap 4441512 CCGAAAGCATACAAA CTGG TGC CCAG CACCGACCACAGCCA TERM 5631 4442610 - 4442589 - H 75 -10.9 -2.97166 | overlap 4442584 ATGTAATCAACCACA CTGCCTGTG AACA CACAGACAG AGAAATACCTTCTGA TERM 5632 4442642 - 4442616 - H 79 -8.1 -4.20086 | opp_overlap 4442620 ACACAGACAGAGAAA TACCTTCTGAC TCCAG GTCAGAATGTA TAACGATTACAAATA SBO_4390 4442927 - 4443931 + | hypothetical protein SBO_4391 4444086 - 4444361 + | IS629 ORF1 TERM 5633 4444681 - 4444669 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SBO_4392 4444361 - 4445248 + | IS629 ORF2 SBO_4393 4445504 - 4446850 + | putative penicillin G acylase SBO_4394 4448338 - 4447142 - | ISSfl2 ORF TERM 5634 4447195 - 4447167 - G 71 -3.2 -4.82901 | TGCGGGGTATAAAAA GTCCCG-TCGCGCA TCA TG-GCGAACAGAAC GTCGCAGCGTCGTCT TERM 5635 4448657 - 4448680 + r 79 -2.4 -5.48825 | gap 1, overlap 4448659 TTATTCGCCAAACCA GTCGTCAGGAT CTT AACCTGA-GGC TTTTTTTACCTACTC TERM 5636 4448816 - 4448801 - R 87 -10.4 -4.15833 | ATGATGATGGTAAAA CCTGGC AGCA GCCAGG TAAGCGTAAACTGAC SBO_4395 4450167 - 4449280 - | IS629 ORF2 TERM 5637 4449847 - 4449859 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SBO_4396 4450442 - 4450167 - | IS629 ORF1 TERM 5638 4450828 - 4450797 - H 72 -5.2 -4.60255 | gap 1, overlap 4450798 4450799 ACAATGTTGTAAAAA TGTCATGGCCGGATT ATA AAAACGGCCATGA-A TCAAAAATACCTCAT TERM 5639 4450827 - 4450799 - H 71 -10.3 -2.60776 | overlap 4450797 4450798 AATGTTGTAAAAATG TCATGGCCGGATT ATA AAAACGGCCATGA ATCAAAAATACCTCA SBO_4397 4451013 - 4451351 + | putative protein encoded within IS SBO_4398 4451421 - 4452416 + | putative protein encoded within IS TERM 5640 4452445 - 4452414 - f 76 -7.5 -4.258 | gap 2 GCACTCACCAATAAA TAAGCGTCAATACGG TGCT CCGT-T-GACGCTTA CGCAGCCAGGCTCTG SBO_4399 4452436 - 4453077 + | hypothetical protein yjiA 4454033 - 4453179 - | putative GTP-binding protein YjiA yjiX 4454349 - 4454146 - | hypothetical protein TERM 5641 4454389 - 4454373 - R 93 -13.7 -3.60234 | opp_overlap 4454368 CCAGATATGCGTAAA GCCCGGA AGG TCCGGGC TAGGGATTTGCCGGA TERM 5642 4454460 - 4454416 - R 86 -11.6 -3.53811 | gap 2, opp_overlap 4454408 4454444, overlap 4454417 CGGATGCGGCGTAAA CGCCTTATCCGGCCTACGATAG ACA CT-TTGTAGGCCGGATACG-CG CAGCGCATCCGGCAA TERM 5643 4454461 - 4454417 - R 76 -11.6 -2.72144 | opp_overlap 4454408 4454444, overlap 4454416 GGATGCGGCGTAAAC GC-CTTATCCGGCCTACGATAG ACA CT-TTGTAGGCCGGATACGCGC AGCGCATCCGGCAAC yjiY 4456645 - 4454480 - | putative carbon starvation protein TERM 5644 4457017 - 4456989 - R 100 -9.6 -5.2291 | gap 1, overlap 4456990 AGATCACAATAAAAA TGCCCCTTCGACG AATA CGT-GAAGGGGCT GGAGCTTAAATCGCA TERM 5645 4457016 - 4456990 - R 95 -13.1 -3.72119 | gap 1, overlap 4456989 GATCACAATAAAAAT GCCCCTTCGACG AATA CGT-GAAGGGGC TGGAGCTTAAATCGC hpaC 4457535 - 4457023 - | 4-hydroxyphenylacetate 3-monooxygenase coupling protein hpaB 4459115 - 4457553 - | 4-hydroxyphenylacetate 3-monooxygenase TERM 5646 4459266 - 4459278 + r 82 -7.7 -4.67904 | GTTTTGTGATCGAGG TCGCT TTT AGCGA TTTTTGACGTTACTA TERM 5647 4459323 - 4459296 - R 100 -14.2 -3.74693 | overlap 4459320 TTTGACGTTACTAAA TCCCCTTGCTCC AGGC GGAGAAAGGGGA ATAGCAGGTGGTGCC hpaX 4461638 - 4460262 - | putative 4-hydroxyphenylacetate permease TERM 5648 4461624 - 4461637 + g 74 -2.4 -5.16841 | overlap 4461602 4461623 CTCCGGTATGGCAGG TGAG GTGTCG CTCA TTTTTCTTCCTCTAA TERM 5649 4461800 - 4461752 - R 72 -9 -3.53811 | gap 1, opp_overlap 4461728 4461744 4461729 4461786, overlap 4461753 CGGATGCGGCGTAAA CGC-CTTATCCGGCCTACGGT TTGGTGCG AGTGTAGGCCGGATAAGTGCA GCGCATCCGGCATTA TERM 5650 4461799 - 4461753 - R 71 -10.3 -2.72144 | gap 1, opp_overlap 4461728 4461744 4461729 4461786, overlap 4461752 GGATGCGGCGTAAAC GC-CTTATCCGGCCTACGGT TTGGTGCG AGTGTAGGCCGGATAAGTGC AGCGCATCCGGCATT hpaI 4462601 - 4461813 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 5651 4461892 - 4461855 - G 76 -9.1 -3.72576 | gap 1, opp_overlap 4461855 GGCCTGCGCACCAAA CCGTGCT-GCCAGCGC TTCAGCG GCGCGGGCGAGCAGGG TGGTGTCAACGCCGA hpaH 4463415 - 4462765 - | 2-oxo-hept-3-ene-1,7-dioate hydratase TERM 5652 4462799 - 4462814 + g 70 -6 -4.20516 | overlap 4462803 GGATGATTCAGCACG CCAGCG GCGA CGCCGG TTTCTTCAATCACGC TERM 5653 4463338 - 4463358 + g 80 -5.4 -4.88736 | gap 1, overlap 4463327 4463335 4463339 GTAATCCAGCGAGAT C-GCGCGGA TCTG TTCGCGCTG TTTTTCTGCCTGATC TERM 5654 4463339 - 4463356 + g 81 -9.1 -4.06182 | overlap 4463327 4463335 4463338 TAATCCAGCGAGATC GCGCGGA TCTG TTCGCGC TGTTTTTCTGCCTGA hpaF 4463906 - 4463526 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpaD 4464767 - 4463916 - | homoprotocatechuate dyoxygenase TERM 5655 4464229 - 4464210 - G 82 -9.2 -4.16842 | overlap 4464226 CTGATCGTCAATAAA GCGGTGCG ATAA CGAACCGC TGGCAAGGACCGCCA hpaE 4466235 - 4464769 - | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase hpaG 4467521 - 4466232 - | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase TERM 5656 4468045 - 4468029 - g 72 -8.7 -3.72695 | AGTGTTGCGATTAAA GCCGATC AAT GATCAGC GGAAGCTCTATATCT hpcR 4467793 - 4468239 + | homoprotocatechuate degradative operon repressor TERM 5657 4468258 - 4468268 + F 80 -6.8 -4.67353 | opp_overlap 4468258 TTTAGTATCTGATAA CCAG CGC CTGG TTTTTCCATGGATGG TERM 5658 4468294 - 4468305 + F 72 -3 -4.98531 | GATGGCGGGTTACAC CTTT TCAT AAAG TTTTTGCTTTCCAAG TERM 5659 4468383 - 4468397 + G 72 -7.1 -4.20883 | GTATCAAGATCGTGA CCAGC TTACT GCTGG TTTTGGCCGTTTTTG TERM 5660 4468708 - 4468669 - g 91 -5.6 -5.42862 | gap 1, opp_overlap 4468703, overlap 4468685 4468686 ACAGGCGGAAAAAAA CTG-GGCGGATTACGAAGC GTT GCCGCGTGACCCGCGTCAG AGCACCGCCGCAGCG TERM 5661 4469457 - 4469439 - g 70 -5.2 -4.37886 | opp_overlap 4469440, overlap 4469440 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATTGACGGCATTGC tsr 4468358 - 4470013 + | methyl-accepting chemotaxis protein I TERM 5662 4470053 - 4470026 - f 95 -12.2 -4.2679 | gap 1, overlap 4470006 TAATCGCCATGAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAAGGAGATTAATCT insB 4471208 - 4471711 + | IS1 ORF2 yjjM 4473221 - 4472415 - | hypothetical protein TERM 5663 4473056 - 4473066 + g 70 -4 -4.69656 | TGAAAAAAGCCTGCT CAAA CAC TTTG TTTTGTTCACTCATT yjjN 4473453 - 4474490 + | putative oxidoreductase TERM 5664 4474518 - 4474544 + T 100 -5.8 -5.90231 | opp_overlap 4474509 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTCTGTTTCT TERM 5665 4474619 - 4474585 - T 100 -18 -3.30124 | opp_overlap 4474585 TTGTAGGCCGCAGAA GGTGTGTAGGTCGCAC CTT ATGCGACCTACACATC AGTCAGGAATTATCC mdoB 4476920 - 4474629 - | phosphoglycerol transferase I TERM 5666 4475916 - 4475902 - G 72 -5.7 -4.54047 | GTACGCGAGATAAAA CCATC CGGGT GATGG GTATCGACTGTCAGG yjjA 4477671 - 4477174 - | hypothetical protein dnaC 4478454 - 4477717 - | DNA replication protein DnaC TERM 5667 4478332 - 4478346 + g 93 -11.4 -4.15703 | ACGTTCGAGAGCGGC GGAGCG GAT CGCTCC TTGTTCTTTCTGCCA dnaT 4478996 - 4478457 - | primosomal protein I TERM 5668 4478553 - 4478567 + g 77 -2.7 -5.07486 | GGCACGACCGATTTG CAGGC TGCGC GCCAG TTTTTGTTGCCACTG TERM 5669 4479050 - 4479087 + r 79 -10.6 -3.53091 | opp_overlap 4479051, overlap 4479051 4479053 ATAACTTTTATAGTA ACACACGGAGGAGAGG AGGCTG TCTCTCATCCGTGTGC TTTAAGCGAGGCAAT TERM 5670 4479086 - 4479051 - R 83 -13.4 -3.26947 | opp_overlap 4479050 4479051 4479053 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTTAAGCGAGGCAA TERM 5671 4479051 - 4479086 + r 83 -14.1 -2.71712 | opp_overlap 4479051, overlap 4479050 4479053 TAACTTTTATAGTAA CACACGGAGGAGAGG AGGCTG TCTCTCATCCGTGTG CTTTAAGCGAGGCAA TERM 5672 4479053 - 4479084 + r 74 -10.9 -2.90496 | opp_overlap 4479051, overlap 4479051 4479050 ACTTTTATAGTAACA CACGGAGGAGAGG AGGCTG TCTCTCATCCGTG TGCTTTAAGCGAGGC yjjB 4479430 - 4479104 - | hypothetical protein yjjP 4480401 - 4479568 - | putative structural protein TERM 5673 4480298 - 4480288 - G 70 -5.4 -4.43397 | TTGCAAAAGAAATAA TCCA CAC TGGA TACAAAGCCGTGTTA TERM 5674 4480317 - 4480305 - G 81 -9.1 -4.05747 | opp_overlap 4480302 CACACTGGATACAAA GCCGT GTT ACGGC TCGCTGTTGCTCAGT TERM 5675 4481544 - 4481526 - g 86 -3.9 -5.41143 | gap 1 CAGCGCCCAAAAAAA CAGTGCGA TGCG TCG-ACTG GCAATTCACAGCAAC yjjQ 4480957 - 4481682 + | putative regulator fhuF 4483142 - 4482354 - | ferric iron reductase involved in ferric hydroximate transport SBO_4428 4483172 - 4483519 + | putative inner membrane protein rsmC 4485179 - 4484148 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 5676 4485524 - 4485508 - gH 79 -2.2 -5.26316 | overlap 4485509 TGACGCCAGAAAAAA TCGCGA TGCTG CCGCAA GGCAGTCGCTGCAAC holD 4485282 - 4485695 + | DNA polymerase III subunit psi rimI 4485664 - 4486110 + | ribosomal-protein-alanine N-acetyltransferase TERM 5677 4486410 - 4486425 + G 70 -6.8 -4.1347 | gap 1, opp_overlap 4486403 GCGGAAATCTGCACG CCGCTGC CGG GC-GCGG TTTCTCTGCTTAACG yjjG 4486125 - 4486802 + | nucleotidase TERM 5678 4486911 - 4486944 + G 77 -8.9 -4.06419 | gap 1, opp_overlap 4486919, overlap 4486919 ACGTTGTCTCCTTAT TTGCAAGAG-GTGGCG AAG CGCCGCACTTTTGCCA TTATTTCTCACCCGG TERM 5679 4487821 - 4487800 - g 70 -5.9 -4.18018 | gap 1 GCTTCGTATTTAAAA TTCAGG-CCA ATA TGGACCCGAA ACATCGCGACCGCGT prfC 4486893 - 4488482 + | peptide chain release factor 3 TERM 5680 4488493 - 4488518 + F 86 -14.7 -2.68338 | overlap 4488491 4488490 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTCCCTTCCT TERM 5681 4489800 - 4489818 + F 100 -14.6 -4.28049 | opp_overlap 4489800 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 5682 4489818 - 4489800 - f 100 -14.6 -3.67989 | opp_overlap 4489800 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 5683 4490257 - 4490267 + G 74 -8.2 -3.90744 | opp_overlap 4490255 CGTTGCAAATGGATA CCGC CGC GCGG TTGTTTGACAGCGGC yjjU 4489890 - 4490963 + | hypothetical protein yjjV 4490960 - 4491742 + | putative deoxyribonuclease YjjV TERM 5684 4491787 - 4491806 + T 73 -10 -3.4252 | opp_overlap 4491783 4491782, overlap 4491772 CGGCGCATAATGCCT GATGCGAC GCTT GTCGCGTC TTATCATGCCTACAG TERM 5685 4491857 - 4491896 + T 73 -11.5 -2.62003 | gap 1, opp_overlap 4491849 4491850 4491883 4491884, overlap 4491856 4491888 CGGATAAGGCGTTCA CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACG CTTGTCGCGTCTTAT TERM 5686 4491888 - 4491907 + T 73 -10 -3.4252 | opp_overlap 4491850 4491884 4491883, overlap 4491857 4491856 TGGCGCACAATGCCT GATGCGAC GCTT GTCGCGTC TTATCATGCCTACAA yjjW 4492819 - 4491956 - | putative activating enzyme TERM 5687 4492765 - 4492744 - GT 75 -10.1 -3.52113 | overlap 4492742 AGCCCTGCAGAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA yjjI 4494101 - 4492791 - | hypothetical protein TERM 5688 4494571 - 4494551 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 5689 4494923 - 4494912 - g 77 -5.8 -4.63218 | opp_overlap 4494917 CTGTTCGCAATAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SBO_4442 4494492 - 4495310 + | IS911 ORF2 TERM 5690 4496401 - 4496381 - g 88 -5.3 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCGGCGG GCGGCGTGCGTACTG deoC 4495792 - 4496571 + | deoxyribose-phosphate aldolase deoA 4496698 - 4498020 + | thymidine phosphorylase deoB 4498072 - 4499295 + | phosphopentomutase deoD 4499375 - 4500094 + | purine nucleoside phosphorylase TERM 5691 4500128 - 4500151 + T 100 -12.4 -4.87037 | CGATTGTCGTGTGAA GCCGGAGTGG GAGA CTGCTCCGGC TTTTTAGTATCTATT insB 4500770 - 4500267 - | IS1 ORF2 SBO_4448 4500845 - 4501120 + | putative IS1 encoded protein lplA 4502342 - 4501326 - | lipoate-protein ligase A TERM 5692 4501737 - 4501722 - G 72 -4.6 -4.60255 | opp_overlap 4501736 ATAATGGGCGAAAAA GGCCTT GGTT ATGGCC TCGCAAACCTGCTCA TERM 5693 4501948 - 4501960 + g 70 -6.9 -4.07687 | overlap 4501949 CCTGAGACTTTGCGG TCGCC TTC GGCGG TTTTCACCACCAGAT smp 4503014 - 4502370 - | hypothetical protein serB 4503120 - 4504088 + | phosphoserine phosphatase TERM 5694 4504116 - 4504090 - f 76 -11.6 -2.6953 | gap 1, overlap 4504089 TGAATCAGAAGTAAT TGCTCGCCCGC CATCCT GCGGGCG-GCA CAGCATTAACGAGGT TERM 5695 4504926 - 4504913 - g 78 -5.2 -4.87665 | GCGCAGCCATAAAAA CCGC TTCGGC GCGG TGAATGAGCTGGGCG sms 4504137 - 4505519 + | DNA repair protein RadA TERM 5696 4505688 - 4505664 - g 72 -5 -4.67641 | gap 1, opp_overlap 4505686, overlap 4505665 ATGCCAAAATTAAAA GCC-CCAGC GCGCAAAA GCTGGAGGC GTTGCACCGTTTTTT TERM 5697 4506530 - 4506502 - g 70 -4.6 -4.56597 | gap 1 GGCGTTCTGCAAAAA GTACGAAGGG-CG TGAG CATCCGTTCGTAC AGGCGTTGATTGATG nadR 4505540 - 4506772 + | nicotinamide-nucleotide adenylyltransferase TERM 5698 4506922 - 4506953 + T 70 -10 -3.10164 | opp_overlap 4506932 4506933, overlap 4506933 ACTAAGGCTATTGTA GGCCGGAAAAGGCG TTCA CGCCGTATCCGGCA TTCGGTGCTCAATGC TERM 5699 4506943 - 4506932 - T 71 -7.2 -4.09685 | opp_overlap 4506922 4506933, overlap 4506933 TTGTAGGCCGGAAAA GGCG TTCA CGCC GTATCCGGCATTCGG TERM 5700 4507038 - 4507069 + T 83 -10 -4.15508 | opp_overlap 4507048, overlap 4507039 ATTTCTTGGTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTTTACGCATTACTT TERM 5701 4507039 - 4507068 + T 82 -13.5 -3.08581 | opp_overlap 4507048, overlap 4507038 TTTCTTGGTTTGTAG GCCGGATAAGGCG TTCA CGCCGCATCCGGC ATTTTACGCATTACT yjjK 4508746 - 4507079 - | putative ABC transporter ATP-binding protein slt 4508957 - 4510894 + | lytic murein transglycosylase TERM 5702 4510965 - 4510939 - f 85 -12.2 -3.4252 | overlap 4510940 CTTTAGCGAGTACAA CCGGGGGAGGCA TTT TGCTTCCCCCGC TAACAATGGCGACAT TERM 5703 4510964 - 4510940 - f 90 -15.7 -2.65298 | overlap 4510939 TTTAGCGAGTACAAC CGGGGGAGGCA TTT TGCTTCCCCCG CTAACAATGGCGACA TERM 5704 4511026 - 4511045 + G 72 -6.4 -4.3898 | opp_overlap 4511025 4511026 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 4510984 - 4511310 + | Trp operon repressor TERM 5705 4511331 - 4511384 + T 71 -10.2 -2.62463 | gap 1, opp_overlap 4511328 4511331 4511330 4511364, overlap 4511374 TAGGCCTGATAAGAC GCGGCAGCGTCGCATCAGGCA-TCG TGCAC CGAATGCCGGATGCGGCGTGAACGC CTTATCCGTCCTACA yjjX 4511916 - 4511395 - | NTPase TERM 5706 4511750 - 4511765 + g 72 -8.2 -3.76224 | TTTGCTACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA gpmB 4511968 - 4512615 + | phosphoglycerate mutase rob 4513481 - 4512612 - | right origin-binding protein TERM 5707 4514138 - 4514126 - g 74 -6.2 -4.56775 | opp_overlap 4514126 4514125 AGGTTCGCCGAAAAA CGCG ATTAG CGCG GTTCCTGTCATGCCG creA 4513692 - 4514165 + | hypothetical protein creB 4514202 - 4514867 + | DNA-binding response regulator CreB creC 4514867 - 4516291 + | sensory histidine kinase CreC TERM 5708 4517023 - 4517037 + G 77 -2.8 -5.13521 | opp_overlap 4517023 GCCCTTAACCAGCAA CTGG CCGCATC CCAG TTTTTTAGGTGATTT creD 4516349 - 4517701 + | hypothetical protein TERM 5709 4517741 - 4517712 - T 100 -13.7 -4.64144 | opp_overlap 4517718, overlap 4517718 AATAAGGTTGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTT TTGACGGTGGTAAAG TERM 5710 4517735 - 4517718 - T 100 -12.7 -5.61881 | opp_overlap 4517718, overlap 4517712 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTTGACGGTG TERM 5711 4517718 - 4517735 + T 100 -12.7 -5.76949 | opp_overlap 4517718 4517712 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTTGACGGTG arcA 4518477 - 4517761 - | two-component response regulator TERM 5712 4517986 - 4517998 + g 71 -9.1 -3.44051 | opp_overlap 4517973 CATGGCGCGGAACTC GCTGC GCG GCAGC TTGTACTGCTCGCCA yjjY 4518573 - 4518713 + | hypothetical protein lasT 4519113 - 4519799 + | putative RNA methyltransferase