TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.480424 %AT, 3742877 nt, 32195 terms. Intergenic: 0.538363 %AT, H2T: 748256 nt, 6043 terms; T2T: 252403 nt, 4774 terms; H2H: 281247 nt, 4297 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|24111450|ref|NC_004337.1| Shigella flexneri 2a str. 301, complete genome (length 4607203) thrL 190 - 255 + | thr operon leader peptide TERM 1 280 - 301 + F 100 -13 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGACA GTGCGGGC TTTTTTTTCGACCAA TERM 2 301 - 280 - f 100 -13.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAC AGTGCGGGC TTTTTTTTCGACCAA TERM 3 654 - 642 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTGG TERM 4 2667 - 2654 - g 73 -3.7 -4.81249 | overlap 2655 GTTCAAAGTGAAAAA TGGCG AAAA CGCCC TGGCCTTTTATAGCC thrA 336 - 2798 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2800 - 3732 + | homoserine kinase thrC 3733 - 5019 + | threonine synthase TERM 5 5043 - 5069 + F 91 -8 -5.24129 | gap 1, opp_overlap 5042 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA SF0005 5242 - 5529 + | hypothetical protein TERM 6 5557 - 5538 - T 73 -7.8 -4.13654 | overlap 5551 CCGCTAAATGACAAA TGCCGGGT AACA ATCCGGCA TTCAGCGCCTGATGC TERM 7 5563 - 5596 + T 76 -11.7 -2.62043 | opp_overlap 5551, overlap 5558 5573 CAATCCGGCATTCAG CGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACGTTAATTCTGCA TERM 8 5638 - 5669 + T 70 -10 -3.06133 | opp_overlap 5648 CTGCATGCTTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTGACTACAAACTTA yaaA 6458 - 5682 - | hypothetical protein TERM 9 6230 - 6213 - G 73 -9.1 -3.5882 | overlap 6221 6222 GACATCACCTTTAAA CGCCAGA ATCG CCTGGCG GGCATTCGCCGGCGT SF0008 8074 - 8358 + | hypothetical protein TERM 10 8710 - 8749 + GF 70 -10.6 -2.50988 | overlap 8709 8708 8747 TAACCTGACCCTGCT GTTCTCCTTCGCTCAGGC TCGT GCTTGTGCGGAGGCGGGC GTGTTCCTGATCTCG talB 8237 - 9190 + | transaldolase B TERM 11 9197 - 9226 + F 80 -12.9 -2.5294 | overlap 9196 9194 CTGCTGTAATCATTC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAGCCTG mogA 9305 - 9892 + | molybdenum cofactor biosynthesis protein TERM 12 9915 - 9898 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC GAGC GGGGGGA TCTCAAGACAATTAG yaaH 10493 - 9927 - | hypothetical protein TERM 13 10377 - 10367 - G 75 -6.8 -4.36914 | TGCCGCCGTAGAAAA TGCC CAT GGCA AGAATAATACCGTCC SF0012 11355 - 10642 - | hypothetical protein TERM 14 10787 - 10747 - G 87 -14 -3.07994 | gap 1 TTTAACCCCATTTAA TGCTGCGC-CCACAGGGCC TCCC AGCCCCGCGCCGCGCAGCA AACCATGCCCAAGTA TERM 15 11109 - 11143 + g 90 -14.4 -2.96274 | overlap 11103 ATTTACCGTGTCCGC GCAGTTTGTTGGCGAT ACT ATCGCCACCAAAATGC TGTAATTCTCCGGCA TERM 16 11241 - 11253 + g 80 -5.5 -4.93968 | TCAGTATGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT yaaI 11785 - 11381 - | hypothetical protein TERM 17 11847 - 11873 + H 75 -3 -5.11112 | TTTACTGCTGATAAA GAGAAGATTCAG GCA CGTAATCTTTTC TTTTTATTACAATTT dnaK 12162 - 14078 + | molecular chaperone DnaK TERM 18 14142 - 14103 - f 84 -13.6 -2.91467 | gap 1, opp_overlap 14104 AAACGGGTAATTATA CTGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAT TERM 19 14104 - 14141 + F 100 -17.1 -3.25823 | gap 1, opp_overlap 14103 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 20 15242 - 15252 + G 70 -6.8 -4.03811 | overlap 15244 AGCACAACAGCCCGC GCTC AAA GAGC TTCTTTGATGGTGTG dnaJ 14167 - 15297 + | chaperone protein DnaJ TERM 21 15326 - 15309 - f 95 -12.7 -4.09739 | CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CTGGGTAAAAATAGG TERM 22 15394 - 15373 - f 73 -11.5 -2.74792 | opp_overlap 15373 15374, overlap 15372 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 23 15373 - 15394 + F 90 -13.7 -3.39449 | opp_overlap 15373 15372, overlap 15374 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 24 15374 - 15393 + F 90 -15 -2.63348 | opp_overlap 15373 15372, overlap 15373 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG TERM 25 15618 - 15650 + F 72 -4.9 -4.64844 | gap 1, opp_overlap 15586 TTCAGCATATAGGAG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC TERM 26 16172 - 16185 + G 70 -6.7 -4.06611 | overlap 16169 ATTCTTTAGCAGTGA TGCCT CGGG AGGCA TTATTCTTATCATTG nhaA 16140 - 17306 + | pH-dependent sodium/proton antiporter TERM 27 17322 - 17341 + F 93 -10.7 -4.59414 | CAGGACGGTTTACCG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 17372 - 18271 + | transcriptional activator NhaR insB 19079 - 18684 - | IS1 ORF2 insA 19381 - 19106 - | IS1 ORF1 TERM 28 19725 - 19740 + r 74 -6 -4.57341 | opp_overlap 19726, overlap 19726 AGCAGGCATAAAAAA ACCCGC TTGC GCGGGC TTTTTCACAAAGCTT TERM 29 19739 - 19726 - R 100 -9.5 -5.64274 | opp_overlap 19725 19726 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 30 19726 - 19739 + r 73 -9.5 -3.33922 | opp_overlap 19726, overlap 19725 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 31 19755 - 19786 + r 72 -10.3 -2.89683 | opp_overlap 19764, overlap 19759 19763 CTTTTTCACAAAGCT TCAGCAAATTGGC GATTAA GCCAGTTTGTTGA TCTGTGCAGTCAGGT rpsT 20033 - 19770 - | 30S ribosomal protein S20 TERM 32 21253 - 21241 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 20362 - 21303 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 33 21512 - 21494 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 34 22501 - 22480 - g 71 -9.5 -3.55622 | gap 1 GTGAACGTCTTCAAA GCG-AACGAC ATC GTCGTTGCGC TGCTGCAGGAAAAAG TERM 35 22564 - 22541 - g 81 -8.8 -4.38712 | overlap 22542 TGCACGTTGAGAAAA TGCAGCACAG CTAT CCGTGCTGCT GGCGTCACAAAACGC TERM 36 22563 - 22542 - g 81 -12.3 -3.22906 | overlap 22541 GCACGTTGAGAAAAT GCAGCACAG CTAT CCGTGCTGC TGGCGTCACAAAACG TERM 37 23995 - 23970 - g 71 -10.5 -2.88069 | gap 1, overlap 23967 TGCAGACTATAACGA CGCACCTGCTGA TGC TCAGCAGA-GCG AAGTACTCAAAGGGC ileS 21346 - 24162 + | isoleucyl-tRNA synthetase TERM 38 24279 - 24245 - g 71 -9.2 -3.44848 | opp_overlap 24269, overlap 24243 TCTGGGCAGCAAATA CCTGATCCTCCAGAAC TTT GCTCTGGGGGATACGG TCCCGCTGTTCCCGT lspA 24162 - 24656 + | lipoprotein signal peptidase slpA 25198 - 24749 - | FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) TERM 39 25121 - 25144 + g 88 -11 -4.14243 | opp_overlap 25121 GTTGTTGCGAGTAGA CTCGGCGGTG GTGC CATCGTCGAG TTTTAGCGTGAAGTG TERM 40 25333 - 25310 - g 88 -11 -4.14243 | opp_overlap 25310 CACTTCACGCTAAAA CTCGACGATG GCAC CACCGCCGAG TCTACTCGCAACAAC slpA 25256 - 25705 + | FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) ispH 25707 - 26657 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 41 26705 - 26686 - f 79 -9.3 -4.15453 | opp_overlap 26686 26703 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGAAGAAA TERM 42 26686 - 26705 + F 100 -9.3 -5.24129 | opp_overlap 26686, overlap 26703 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGAAGAAA yaaF 26723 - 27637 + | ribonucleoside hydrolase RihC dapB 27804 - 28625 + | dihydrodipicolinate reductase TERM 43 28681 - 28699 + F 79 -3.1 -5.32396 | opp_overlap 28681 TTTATTAATTATAAA GGGCT TTAATTTTT AGCCC TTTTATTTTTGGTGT TERM 44 30017 - 29989 - g 73 -3.7 -4.84761 | overlap 29990 30013 AGATGTGGAGAAAAA CGTGGTGATGATC ACC GCCCAGAACCACG GTTTTGCGGTGGATG carA 29081 - 30229 + | carbamoyl phosphate synthase small subunit TERM 45 32831 - 32812 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC AAAAGTGGCGGCGCG carB 30247 - 33468 + | carbamoyl phosphate synthase large subunit TERM 46 33522 - 33541 + F 100 -10 -6.07627 | opp_overlap 33522 33520 ATCGAATAACTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTTTGCCCAT caiF 33730 - 34125 + | DNA-binding transcriptional activator CaiF TERM 47 34234 - 34256 + T 79 -8.4 -4.33165 | overlap 34249 TAGGCGTCACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTTCCTCCATTTGC caiE 34822 - 34211 - | carnitine operon protein CaiE caiD 35700 - 34807 - | carnitinyl-CoA dehydratase caiC 37269 - 35701 - | putative crotonobetaine/carnitine-CoA ligase TERM 48 36332 - 36313 - G 70 -10 -3.19003 | opp_overlap 36325, overlap 36302 ATAAGACGTCAGCAA GCGAACGC CGAA GCGTTCAC AAAATGCGTCTTTTT TERM 49 37158 - 37184 + g 75 -7.2 -4.38712 | ACCGGTTAACGACTC CGCCGCTGGATT CAC AAATCAGCGCCG TTTTATGACCGTAAA caiB 38545 - 37328 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 50 38581 - 38610 + r 100 -15.7 -3.21695 | opp_overlap 38598, overlap 38576 38590 ATGTAGCGCATGACT GCCGGATGCGGCG TAAA CGCCTTATCCGGC TTACATTCGTGCTCC caiA 39816 - 38674 - | crotonobetainyl-CoA dehydrogenase TERM 51 38954 - 38970 + g 73 -3.6 -4.7497 | overlap 38955 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 41361 - 39847 - | L-carnitine/gamma-butyrobetaine antiporter TERM 52 41311 - 41339 + g 87 -4.5 -5.30339 | GACGATTATTAATGG CGGAAAGAAAACC TTC GGTTCTATTCCCG TTTTTCTCTTTTCAT TERM 53 41501 - 41516 + H 89 -6.2 -5.28942 | CAATAAGCTGTATTC TGTGAT TGGT ATCACA TTTTTGTTTCGAGTG fixA 41717 - 42487 + | putative electron transfer flavoprotein FixA SF0039 42502 - 43293 + | putative electron transfer flavoprotein subunit alpha fixC 43494 - 44780 + | putative oxidoreductase FixC fixX 44777 - 45064 + | putative ferredoxin TERM 54 45580 - 45598 + G 77 -12.4 -2.80113 | CCGCGATGTGGTATG TCGGCGCG ACC TGCGCCGA TCTGGTCGGCTACTG yaaU 45123 - 46517 + | putative transport protein yabF 46565 - 47095 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 55 48067 - 48057 - g 75 -6.8 -4.42062 | opp_overlap 48056 48057 48060 CAGGTGCCAAATAAA CAGC GTC GCTG GTTTGCGGTGTTGTT kefC 47088 - 48950 + | glutathione-regulated potassium-efflux system protein KefC folA 49141 - 49620 + | dihydrofolate reductase TERM 56 49644 - 49678 + T 82 -12.1 -3.322 | opp_overlap 49637 49634, overlap 49645 AGAATTTACGGCTAG TGCCGGATGCGACGC CGGTC GCGTCTTATCCGGCC TTCCTGTATCAGGCT TERM 57 49645 - 49677 + T 90 -15.6 -2.58999 | opp_overlap 49637 49634, overlap 49644 GAATTTACGGCTAGT GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC CTTCCTGTATCAGGC apaH 50540 - 49698 - | diadenosine tetraphosphatase apaG 50924 - 50547 - | ApaG TERM 58 50635 - 50656 + g 72 -8.7 -3.71527 | gap 1, overlap 50648 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 59 50726 - 50708 - G 76 -11 -3.30124 | opp_overlap 50694 50708 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 51748 - 50927 - | dimethyladenosine transferase pdxA 52734 - 51745 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 60 52600 - 52583 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG surA 54020 - 52734 - | peptidyl-prolyl cis-trans isomerase SurA imp 56427 - 54073 - | organic solvent tolerance protein TERM 61 55925 - 55948 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 55915 55925, overlap 55915 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCGCCACGTTGT TERM 62 56817 - 56803 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 63 56820 - 56840 + G 74 -3.1 -5.00884 | opp_overlap 56822, overlap 56828 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 56682 - 57497 + | DNA-J like membrane chaperone protein TERM 64 57550 - 57506 - T 72 -9.1 -3.6512 | opp_overlap 57524 57526, overlap 57521 57523 57524 TAAATAAGTTTTAAA CTGTAGGCCTGATAAGACGCG GCC CGCGTCGCATCAGGCAATCGG CGCACAATTGCCGGA TERM 65 57535 - 57521 - T 79 -11.4 -3.30124 | opp_overlap 57524 57526, overlap 57506 57523 57524 CTGTAGGCCTGATAA GACGCG GCC CGCGTC GCATCAGGCAATCGG TERM 66 57580 - 57523 - T 71 -9.8 -3.21924 | gap 1, opp_overlap 57524 57526, overlap 57521 57506 57524 57558 GTAGGCCTGATAAGA CGCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GCC TTATCCGCCTACCGA TERM 67 57579 - 57524 - T 80 -13.3 -2.5294 | gap 1, opp_overlap 57524 57526, overlap 57521 57506 57523 57558 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG TERM 68 57524 - 57579 + T 73 -11.1 -2.58544 | gap 1, opp_overlap 57521 57506 57524 57523 57558, overlap 57526 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG yabO 58331 - 57645 - | hypothetical protein TERM 69 58007 - 58043 + gT 72 -8.6 -3.72576 | gap 1, overlap 58009 GCTTTTTCGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC TERM 70 58234 - 58210 - GT 95 -13.7 -3.29273 | opp_overlap 58232, overlap 58208 58232 TTGACCACCATAATA TGGTCATCCTG ATA CAGGATAACCA ACCAGGGTTCCTGCG hepA 61192 - 58286 - | ATP-dependent helicase HepA TERM 71 58335 - 58347 + gr 76 -9.1 -3.77219 | TCCAGACGCCAACCT GCCTG ATC CAGGC TTTCCATTACCTGCT TERM 72 60054 - 60078 + gr 71 -10 -3.16944 | overlap 60052 AGCGGCTCGATATCC TGCTCGCCGA TCATC TCGCCGAGCA TGTTCAGTTCGTCAT TERM 73 60130 - 60145 + gr 71 -10.4 -2.59738 | overlap 60129 60127 GCAGCATGGCAACGG CGTCCG CAAC CGGACG ATAATTTTTCTGCTC polB 63708 - 61357 - | DNA polymerase II TERM 74 61423 - 61412 - G 77 -5.8 -4.64676 | overlap 61413 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 75 63749 - 63729 - R 100 -8.3 -5.19261 | opp_overlap 63729 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC TERM 76 63729 - 63749 + r 76 -8.3 -4.14598 | opp_overlap 63729 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC araD 64478 - 63783 - | L-ribulose-5-phosphate 4-epimerase TERM 77 64538 - 64571 + r 70 -9.5 -3.05816 | opp_overlap 64548 64550 64551, overlap 64560 64561 AAATCGCAGCGCGTA GGCCTGATAAGACGC GCCA GCGTCGCATCAGGCG TTGAATGCCGGATGC TERM 78 64560 - 64588 + r 80 -9.5 -3.9941 | opp_overlap 64548 64551 64550, overlap 64538 64561 TAAGACGCGCCAGCG TCGCATCAGGCGT TGA ATGCCGGATGCGC TTTGCTTATCCGGCC TERM 79 64561 - 64587 + r 82 -13 -2.99325 | opp_overlap 64551 64550, overlap 64538 64560 AAGACGCGCCAGCGT CGCATCAGGCGT TGA ATGCCGGATGCG CTTTGCTTATCCGGC araB 67890 - 66190 - | ribulokinase TERM 80 66505 - 66529 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTGACGGCGATC TERM 81 67252 - 67229 - G 72 -5.3 -4.49958 | gap 2, opp_overlap 67232, overlap 67231 AGCTCATCAAAGAAA CTGGCTGGCGG CAAG CCGCC--CCAG CTTTCGTGCCACAGA TERM 82 67999 - 67985 - H 82 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGC ATAGCA AAGTGTGACGCCGTG araC 68229 - 69107 + | DNA-binding transcriptional regulator AraC TERM 83 69731 - 69750 + G 76 -4.2 -4.92314 | overlap 69733 GCGAGTTTAAATGGT TGCTGCTG GCGA CGGCGGTA TTTTTGTGGGTTGGT yabI 69193 - 69957 + | hypothetical protein thiQ 70769 - 70071 - | thiamine transporter ATP-binding subunit thiP 72363 - 70753 - | thiamine transporter membrane protein TERM 84 70843 - 70831 - G 78 -10.5 -3.48036 | TAGTAGCAGAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA TERM 85 71209 - 71197 - G 77 -6.9 -4.49314 | GAGCAGTAAAAAGAA GCCGG TAG CCAGC ACAATCCCCGGCATG TERM 86 71852 - 71819 - G 81 -4.3 -5.10029 | opp_overlap 71844, overlap 71820 ACGAAGCGGAAAAAA TGCCAGCCGCGCATC CCAA GCTGGGCGGCAAGCT GACGTTGTTCGCCGG tbpA 73322 - 72339 - | thiamine transporter substrate binding subunit TERM 87 73186 - 73196 + g 91 -5.4 -5.32699 | overlap 73189 TCGCAGTTACAGTTG GCTT CAA AAGC TTTTTTGATCTTTGG yabN 75141 - 73486 - | transcriptional regulator SgrR TERM 88 74612 - 74600 - G 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGATATTTGCTGCC TERM 89 75407 - 75427 + H 100 -9.7 -6.17268 | GTGTAAAATCACCCG CCAGCAGAT TAT ACCTGCTGG TTTTTTTTATTCTCG yabM 75463 - 76641 + | putative transport protein TERM 90 76682 - 76663 - T 100 -15 -3.64599 | GGACGATAGCGGAAA GCCCGGTC ATTT GACCGGGC AAGGGGTCTAATTCA leuD 77295 - 76690 - | isopropylmalate isomerase small subunit TERM 91 77126 - 77136 + g 72 -4.6 -4.72272 | overlap 77131 ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCGAGAAA leuC 78706 - 77306 - | isopropylmalate isomerase large subunit TERM 92 78225 - 78237 + g 82 -9.1 -4.19624 | ATGGTCTTCGCACGG CCCTG TTT CAGGG TTTGTGTTGCCAGTA leuB 79800 - 78709 - | 3-isopropylmalate dehydrogenase leuA 81371 - 79800 - | 2-isopropylmalate synthase TERM 93 80505 - 80516 + g 72 -5.8 -4.41616 | AGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 94 81221 - 81211 - G 72 -6.8 -4.19817 | TGCACCGATTCAAAA TCGC CCG GCGA AGAGACGGGGAAACC TERM 95 81439 - 81422 - R 100 -14.1 -5.60993 | opp_overlap 81422 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG TERM 96 81422 - 81439 + r 100 -14.1 -5.65927 | opp_overlap 81422 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG leuL 81550 - 81464 - | leu operon leader peptide TERM 97 82509 - 82519 + G 70 -6.8 -4.07568 | GTACAAAATGAATTG CCTG GTT CAGG TTTTGAACCCGCGAG leuO 82209 - 83153 + | leucine transcriptional activator TERM 98 83159 - 83198 + F 100 -19.6 -5.49234 | opp_overlap 83159 83166, overlap 83192 CAAACGCTAACTGAA TGCAGAATAGGCCAGACA TGAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 99 83198 - 83159 - f 100 -15.2 -3.1996 | opp_overlap 83159 83192, overlap 83166 CAAACGCTAACTGAA TGCAGAATAGGCCAGACA TGAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 100 83192 - 83217 + F 71 -3.4 -4.79955 | opp_overlap 83159 83215, overlap 83159 TGAATGTCTGGTTTA TTCTGCATTT TTTATT GAATGTAGAA TTTTATTCTGAATGT TERM 101 83317 - 83333 + F 72 -5.1 -4.68612 | opp_overlap 83317 TTATTATCAATTTAA TCCTTCG TAA TGGAGGA TTTTATCGTTTCTTT TERM 102 83430 - 83442 + F 83 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCGTCAAAC TERM 103 84784 - 84774 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 83471 - 85195 + | acetolactate synthase 3 catalytic subunit ilvH 85198 - 85689 + | acetolactate synthase 3 regulatory subunit TERM 104 85715 - 85735 + G 100 -9.7 -5.41143 | AGTGCGCAATTTGCA GCCCAACAT GTC ACGTTGGGC TTTTTTTGCGAAATC fruL 85701 - 85787 + | fruR leader peptide fruR 85869 - 86873 + | DNA-binding transcriptional regulator FruR TERM 105 86919 - 86888 - f 100 -13.8 -5.06816 | gap 1 ATCCGCGAACAAAAA TACGCGCCAG-GTGA ATT TCCCTCTGGCGCGTA GAGTACGGGACTGGA insA 86996 - 87271 + | IS1 ORF1 insB 87298 - 87693 + | IS1 ORF2 yabB 88252 - 88710 + | cell division protein MraZ TERM 106 88951 - 88979 + G 76 -12.4 -2.63073 | overlap 88950 CCACGGACCTTTCTC CGCGCTGGGCGA ATACG TTGCCGAGCGCG ATCTTATTGGCAAGA TERM 107 89045 - 89056 + G 70 -3.6 -4.61873 | CCGCAACTTGATGAT GCTG AACG CGGC TTTTCCTTTATGCGC mraW 88712 - 89653 + | S-adenosyl-methyltransferase MraW TERM 108 89974 - 89961 - g 76 -8.1 -4.18494 | opp_overlap 89960 89958 GATCGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 89650 - 90015 + | cell division protein FtsL TERM 109 90078 - 90098 + G 78 -7.6 -4.37734 | opp_overlap 90078 90076 90079, overlap 90079 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 110 91597 - 91618 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 91566, overlap 91600 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 111 91600 - 91615 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 91566, overlap 91597 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 112 91656 - 91674 + G 73 -11.6 -2.67171 | opp_overlap 91653 91650, overlap 91653 91655 91654 91670 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 90031 - 91797 + | penicillin-binding protein 3; peptidoglycan synthetase TERM 113 92272 - 92254 - g 72 -5.2 -4.53303 | opp_overlap 92256, overlap 92256 GATCCCGACAGAAAA TACTACCG GTT CGGCAGTT GATGTTCAGCATGAG TERM 114 92270 - 92256 - g 72 -7.8 -3.87627 | opp_overlap 92256, overlap 92254 TCCCGACAGAAAATA CTACCG GTT CGGCAG TTGATGTTCAGCATG TERM 115 92895 - 92885 - g 81 -6.8 -4.62783 | overlap 92886 GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGCCTGCACTG murE 91784 - 93271 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 116 93708 - 93669 - g 75 -11.4 -3.07443 | opp_overlap 93677, overlap 93678 TTATACGGCAGGCAA TCTCAACAACGACATCGG TGTA CCGATGACGCTGTTGCGC TTAACGCCGGAATAC TERM 117 93699 - 93678 - g 77 -10.1 -3.6849 | opp_overlap 93677, overlap 93669 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG CTGTTGCGCTTAACG TERM 118 94466 - 94448 - g 70 -5.2 -4.42806 | opp_overlap 94462, overlap 94452 GCATGGGTAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 93268 - 94626 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 119 95213 - 95235 + G 74 -9.9 -3.5241 | gap 1, opp_overlap 95195, overlap 95211 GACCGATGGTCTTGA CGGTCTGGCA ATTA TGCC-GACCG TATTTGTCGCCGGTG mraY 94620 - 95702 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 120 95784 - 95804 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA murD 95705 - 97021 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 97021 - 98265 + | cell division protein FtsW TERM 121 98770 - 98785 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 98262 - 99329 + | N-acetylglucosaminyl transferase murC 99383 - 100858 + | UDP-N-acetylmuramate--L-alanine ligase ddl 100851 - 101771 + | D-alanine--D-alanine ligase ftsQ 101773 - 102603 + | cell division protein FtsQ ftsA 102600 - 103862 + | cell division protein FtsA ftsZ 103923 - 105074 + | cell division protein FtsZ lpxC 105175 - 106092 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 122 106119 - 106162 + F 100 -4.5 -6.17292 | opp_overlap 106119 106131 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT yacA 106323 - 106835 + | SecA regulator SecM TERM 123 108672 - 108685 + G 75 -4.5 -4.8622 | opp_overlap 108672 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC TERM 124 109497 - 109457 - g 74 -8.9 -3.96327 | AGCGTTTAGCACAAA TGCAGCAGCTTAGCCATCA GGA TGACGACTCTGCAGCCGCA GCTGCACTGGCGGCG secA 106897 - 109602 + | preprotein translocase subunit SecA TERM 125 109624 - 109641 + F 100 -12.7 -5.33866 | opp_overlap 109624 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 126 109641 - 109624 - f 100 -12.7 -4.42639 | opp_overlap 109624 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 127 109889 - 109872 - g 70 -4.1 -4.62069 | overlap 109874 TCGCTATTTGAAAAA CTGGAAT ATGA ATTCCCG GACAGGCATATAACT mutT 109662 - 110051 + | nucleoside triphosphate pyrophosphohydrolase TERM 128 110052 - 110081 + T 76 -12.1 -2.72144 | opp_overlap 110061 110062, overlap 110051 110062 CTTAAGCGTCTGTAG GTCGGATAAGGCG TTCA CGCCGCATCCGAC ATTTGCACAAGATGC SF0097 110200 - 110066 - | hypothetical protein TERM 129 110127 - 110095 - GT 76 -12 -2.53449 | opp_overlap 110062 110104, overlap 110062 110094 110092 ACATTTGCACAAGAT GCCTGATGCGACGC TGTCC GCGTCTTATCAGGC CTACGTGAGGCATCA yacG 110348 - 110151 - | zinc-binding protein yacF 111101 - 110358 - | hypothetical protein TERM 130 110713 - 110703 - G 70 -6.8 -4.08485 | TGTAGGTAAATCAAA GCTG CAA CAGC CGCCTGGGATGCTCA coaE 111721 - 111101 - | dephospho-CoA kinase TERM 131 111694 - 111659 - G 100 -13.4 -3.81951 | overlap 111660 TCCGAGATCAGCAAA CGCATTGGCAACGGTA CTCT TACCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 132 111693 - 111660 - G 100 -16.9 -2.88849 | overlap 111659 CCGAGATCAGCAAAC GCATTGGCAACGGTA CTCT TACCACTGCCAATGC CTCCCGTTAAGGCAA SF0102 113016 - 112909 - | hypothetical protein guaC 111946 - 112989 + | guanosine 5'-monophosphate oxidoreductase TERM 133 112998 - 113023 + gT 100 -16.2 -3.32963 | CCTGTAATCTCCCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATCCCACT hofC 114226 - 113024 - | type IV pilin biogenesis protein TERM 134 113696 - 113682 - G 73 -4.2 -4.77165 | TCCGGCAGAACAAAA TGCAGC ATT GCCACA ACCACCATGATTGCC TERM 135 114310 - 114334 + r 72 -9.2 -3.55622 | opp_overlap 114307 TTTTCAAAAAGCGTA CGCATACCCG CCTGT CGGGCGTGCG TTTCCAGCGATTCAA ppdD 115813 - 115373 - | putative major pilin subunit TERM 136 115766 - 115753 - G 72 -6.7 -4.15453 | CAATGGAGCTTAAAA TGGCA ATGA TGCCA ATAACCACCATCAGT nadC 116909 - 116016 - | quinolinate phosphoribosyltransferase ampD 116997 - 117548 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 117545 - 118399 + | regulatory protein AmpE TERM 137 118434 - 118406 - T 71 -10.2 -2.69151 | overlap 118403 TTGGTGTAGAGATTA TTGCCCTCACCC TGTAC GGGTGAGGGCGT AGAGAGATTAATGCG aroP 119815 - 118442 - | aromatic amino acid transporter pdhR 120356 - 121120 + | transcriptional regulator PdhR TERM 138 121241 - 121194 - f 73 -11.4 -2.70979 | opp_overlap 121211, overlap 121190 121191 121197 CGGTAACTAAACGTA GAACCTGTCTTATTGAGCTTTC TGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 139 121500 - 121488 - g 78 -9.1 -3.9461 | opp_overlap 121487 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG TERM 140 121717 - 121732 + G 75 -11.8 -2.96695 | overlap 121712 121714 AGGGCCACATCTCCC CGGGCG TTTA CGCCCG TGCTTTCCTGGAAGG aceE 121281 - 123944 + | pyruvate dehydrogenase subunit E1 aceF 123959 - 125839 + | dihydrolipoamide acetyltransferase TERM 141 125867 - 125846 - f 95 -11.5 -4.43477 | opp_overlap 125848, overlap 125848 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 142 125865 - 125848 - f 100 -14.1 -3.82321 | opp_overlap 125848, overlap 125846 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 143 125848 - 125865 + F 100 -14.1 -5.32882 | opp_overlap 125848 125846 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 144 127028 - 127000 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGTT lpdA 126164 - 127588 + | dihydrolipoamide dehydrogenase TERM 145 127623 - 127589 - f 72 -9.4 -3.62255 | opp_overlap 127579 GCGAAGAAGAAGTAA TTTTTCGTTTGCCGGA ACA TCCGGCAATTAAAAAA GCGGCTAACCACGCC TERM 146 127640 - 127624 - f 85 -6.5 -5.26875 | opp_overlap 127624 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC TERM 147 127624 - 127640 + F 91 -6.5 -5.50499 | opp_overlap 127624 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC TERM 148 127811 - 127796 - f 72 -4.7 -4.56597 | CTTTCTCCCGAAAAA CCTGA CGTTGT TCAGG TGATGCCGATTGTAT TERM 149 127857 - 127877 + F 71 -3.9 -4.8622 | overlap 127860 ATCACGTTGCTGTTG GTTCAGTGG GCG CTGCTGTAC TTTTTCCTTAAACAC TERM 150 129642 - 129630 - f 71 -7.7 -3.86346 | GGATTCGTTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 151 129985 - 129974 - g 77 -7.2 -4.57837 | overlap 129975 129976 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT TERM 152 132065 - 132051 - g 72 -7.8 -3.87815 | CTGGATGCGCACAAA GGTCAG TTG CCGACC CGCCTGTGGGTGGCA acnB 129867 - 132464 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 153 132525 - 132500 - f 93 -12.7 -3.66897 | gap 1, opp_overlap 132500, overlap 132492 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA TERM 154 132500 - 132525 + F 100 -12.7 -5.72622 | gap 1, opp_overlap 132500 132492 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA yacL 132639 - 133001 + | hypothetical protein TERM 155 133034 - 133007 - T 100 -17.8 -4.59982 | GCAGAAGTAAATAAA TCTGGCGGAGCC TGGG AGCTCCGCCAGA GCCGTTAAACAGCTG speD 133833 - 133039 - | S-adenosylmethionine decarboxylase speE 134715 - 133849 - | spermidine synthase TERM 156 134797 - 134772 - RH 74 -10.5 -3.24255 | opp_overlap 134772 134774, overlap 134765 134774 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 157 134795 - 134774 - RH 77 -10.9 -3.17362 | opp_overlap 134774 134772, overlap 134772 134765 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 135339 - 134821 - | hypothetical protein TERM 158 135288 - 135298 + gH 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 159 136719 - 136707 - gR 70 -5.5 -4.3739 | overlap 136714 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGGCTCATCGCGCG yacK 135334 - 136884 + | multicopper oxidase TERM 160 136926 - 136903 - TR 82 -11 -3.57462 | opp_overlap 136900 136905, overlap 136905 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTATTTCACAT TERM 161 136905 - 136924 + Tr 93 -13.6 -3.65135 | opp_overlap 136903 136905, overlap 136900 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC TERM 162 136924 - 136905 - TR 90 -13.6 -3.36515 | opp_overlap 136905 136900, overlap 136903 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC gcd 139261 - 136931 - | glucose dehydrogenase TERM 163 138482 - 138492 + g 78 -8.2 -4.15328 | overlap 138483 138489 ATCCGCCATCACTTC CGGC GAA GCCG TTTCTGCTTTGGCTT TERM 164 139445 - 139457 + H 71 -6.9 -4.1822 | TTTTACTGGTATACT GCGCG TCT TGCGC TTTGTTGCGGTGCCA hpt 139522 - 140058 + | hypoxanthine-guanine phosphoribosyltransferase TERM 165 140062 - 140095 + T 79 -3.1 -5.4182 | gap 1, overlap 140065 140066 CTGGACGAGTAAGTG TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA TTTTTATTTGTGGTT yadF 140761 - 140099 - | carbonic anhydrase TERM 166 141384 - 141400 + G 70 -3.5 -4.60924 | TGGATATTGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA yadG 140870 - 141796 + | putative ATP-binding component of a transport system yadH 141793 - 142563 + | hypothetical protein TERM 167 142570 - 142599 + F 95 -12.9 -4.10657 | overlap 142571 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT CGGGGGAGAGGAG TTTTGACGGCTATCA TERM 168 142571 - 142598 + F 85 -14.2 -3.06073 | overlap 142570 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT CGGGGGAGAGGA GTTTTGACGGCTATC yadI 142668 - 143108 + | putative PTS enzyme II B component yadE 143172 - 144401 + | hypothetical protein panD 144785 - 144405 - | aspartate alpha-decarboxylase TERM 169 144484 - 144468 - G 73 -9.4 -3.63744 | opp_overlap 144452 144478, overlap 144466 GTCGCCTTCAAAATA GGCGAC ATTGG GTCGCC AGGTGCGAGCTTCTT TERM 170 144818 - 144832 + H 82 -11.4 -3.56099 | opp_overlap 144818 CCTGTCGTTAACGAA GCAGGC GGT GCCTGC TTTGAGGAAATTCTC TERM 171 144832 - 144818 - H 79 -11.4 -3.33696 | opp_overlap 144818 CCTGTCGTTAACGAA GCAGGC GGT GCCTGC TTTGAGGAAATTCTC yadD 145059 - 145961 + | hypothetical protein TERM 172 146030 - 146000 - T 86 -12 -3.51232 | opp_overlap 146003, overlap 146003 CGTGGGGTAAATTAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AGTATTACGCCAGCT TERM 173 146027 - 146003 - T 77 -9.3 -3.89354 | opp_overlap 146003, overlap 146000 GGGGTAAATTAATAA CTGGCGCCA TCAGCCG TAGCGCCAG TTAAGTATTACGCCA panC 146886 - 146035 - | pantoate--beta-alanine ligase panB 147692 - 146898 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 174 147765 - 147801 + r 79 -10.8 -3.63694 | opp_overlap 147767 147770, overlap 147766 GGGCAATGATTTATC AATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGAC TTATTAAGGGTAGGT TERM 175 147766 - 147800 + r 87 -14.3 -2.77895 | opp_overlap 147767 147770, overlap 147765 GGCAATGATTTATCA ATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGA CTTATTAAGGGTAGG TERM 176 147799 - 147767 - R 83 -13.4 -3.20435 | opp_overlap 147766 147765, overlap 147770 GCAATGATTTATCAA TTACCGCACCGCCA GATGA TGGCGGTGCGGTGG ACTTATTAAGGGTAG TERM 177 147796 - 147770 - R 100 -19.5 -2.79276 | opp_overlap 147766 147765, overlap 147767 ATGATTTATCAATTA CCGCACCGCCA GATGA TGGCGGTGCGG TGGACTTATTAAGGG SF0132 148305 - 147805 - | hypothetical protein insB 148380 - 148883 + | IS1 ORF2 TERM 178 149028 - 149006 - T 79 -8 -4.3898 | opp_overlap 149008 ATGATTTTCAGAAAA TATTTATATT CGT AATATAAATA AATTACCATTTGCTT folK 149510 - 149031 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 150925 - 149507 - | poly(A) polymerase I yadB 151860 - 150964 - | glutamyl-Q tRNA(Asp) synthetase TERM 179 151252 - 151242 - G 81 -6.8 -4.65895 | CTTTCCAGCCAAAAA GCTG GTA CAGC GGGATTTGCCTTACT TERM 180 151901 - 151877 - R 85 -5.6 -5.4505 | opp_overlap 151880, overlap 151880 TCTTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 181 151898 - 151880 - R 100 -11.7 -4.81306 | opp_overlap 151880, overlap 151877 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT TERM 182 151880 - 151898 + r 79 -12.4 -2.79302 | opp_overlap 151880 151877 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT dksA 152382 - 151927 - | DnaK transcriptional regulator DksA sfsA 153264 - 152560 - | sugar fermentation stimulation protein A TERM 183 152907 - 152928 + g 85 -8.7 -4.48175 | opp_overlap 152902 152907 GCAACATAAAGTCAA TACGGCTGC GTTC GGAGCCGTA TTTTACTTCGCTTTT TERM 184 153222 - 153212 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC yadP 153818 - 153279 - | hypothetical protein TERM 185 153396 - 153385 - G 72 -7.2 -4.23723 | TAAGACCAGTTAAAA CCCG GCGG CGGG AATGTCACCGCCTCG TERM 186 153647 - 153626 - G 70 -7.3 -4.07568 | opp_overlap 153626 TCCGTCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC TGCGCTCACTTCGCC hrpB 153838 - 156312 + | ATP-dependent RNA helicase HrpB TERM 187 156811 - 156823 + G 78 -9.1 -3.86346 | GGCAAGGTCTGGCAA CTGCC CGC GGCAG TTTATGGCCGAATGG TERM 188 157878 - 157864 - g 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAG mrcB 156508 - 159042 + | penicillin-binding protein 1b TERM 189 159084 - 159058 - f 100 -16.7 -3.61268 | CATCTAAGCGTGAAA TACCGGATGGC GAGTT GCCATCCGGTA AAATAACATCCCATC TERM 190 159167 - 159186 + F 76 -9.2 -3.68662 | GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT fhuA 159262 - 161505 + | ferrichrome outer membrane transporter TERM 191 161516 - 161537 + F 82 -11.5 -3.5774 | overlap 161517 161533 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCA TTTCACAAGTTGGCT TERM 192 161517 - 161536 + F 90 -15 -2.74322 | overlap 161516 161533 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC ATTTCACAAGTTGGC fhuC 161556 - 162353 + | iron-hydroxamate transporter ATP-binding subunit TERM 193 162376 - 162404 + G 88 -11 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGTCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 162353 - 163243 + | iron-hydroxamate transporter substrate-binding subunit TERM 194 163382 - 163396 + G 72 -4.3 -4.66163 | CGCCGGATATTGACG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 163240 - 165222 + | iron-hydroxamate transporter permease subunit TERM 195 165226 - 165252 + T 78 -12.2 -2.58579 | opp_overlap 165210 165228, overlap 165225 CAGAGCCGTTAATAG AATGCCTCGCCC GGT GGGCGAGGCAAA ATTATCACAACTTCG TERM 196 165250 - 165228 - T 100 -19.2 -3.66288 | opp_overlap 165226 165225, overlap 165210 GAGCCGTTAATAGAA TGCCTCGCCC GGT GGGCGAGGCA AAATTATCACAACTT hemL 166537 - 165257 - | glutamate-1-semialdehyde aminotransferase TERM 197 166814 - 166790 - g 88 -11.4 -3.85698 | overlap 166793 CTCCCTCTTTAGAAA CACCGCAGGC CGCGC GCCTGCGACG CAGACAACTGATTCG TERM 198 166811 - 166793 - g 73 -11.7 -2.70946 | overlap 166790 CCTCTTTAGAAACAC CGCAGGC CGCGC GCCTGCG ACGCAGACAACTGAT TERM 199 167332 - 167350 + G 81 -4.4 -5.14682 | overlap 167334 CTGGCTGCGGCCTTT AACGCGCC GCT GGCGGGTA TTTTGTTTATTATCG TERM 200 167334 - 167348 + G 72 -7 -4.18024 | overlap 167332 GGCTGCGGCCTTTAA CGCGCC GCT GGCGGG TATTTTGTTTATTAT yadQ 166762 - 168183 + | chloride channel protein TERM 201 168471 - 168457 - g 75 -5.6 -4.68994 | opp_overlap 168457 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 168265 - 168609 + | iron-sulfur cluster insertion protein ErpA TERM 202 168619 - 168647 + T 100 -14.7 -3.68024 | overlap 168621 ATCTAATCTGTTGTT CATGTGCCGGATA AAC TATCCGGCACATC TTCTCTCTTCAACGC TERM 203 168621 - 168645 + T 100 -17.3 -3.41962 | overlap 168619 CTAATCTGTTGTTCA TGTGCCGGATA AAC TATCCGGCACA TCTTCTCTCTTCAAC yadS 169279 - 168656 - | hypothetical protein yadT 170117 - 169317 - | vitamin B12-transporter protein BtuF TERM 204 170100 - 170082 - G 88 -11.7 -3.79419 | overlap 170080 TGGCGCGAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGATTTAGCC pfs 170808 - 170110 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 170892 - 172277 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 205 172874 - 172894 + G 70 -11.1 -2.78216 | opp_overlap 172871 172874, overlap 172871 AGCAACAGAAATTCA TGGCGCTGG GTT CCGGCGTCA TCATTGATGCCGATA htrA 172543 - 173967 + | serine endoprotease TERM 206 173978 - 174001 + T 95 -14.6 -3.52093 | AGTAATCTCCCTCAA CCCCTTCCTG AATA CGGGAAGGGG TTCTCCTTACAATCT TERM 207 175136 - 175152 + T 79 -8.7 -4.27441 | ATGTGCAACCGCTGG CAACGTC AAA GGCGTTG TTTATTCATCGTAAT yaeH 175753 - 175367 - | hypothetical protein TERM 208 175625 - 175639 + g 75 -7.1 -4.40003 | AAACTTAACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA TERM 209 176026 - 176064 + r 77 -11 -3.15996 | opp_overlap 176016 176030 176033 176035, overlap 176024 176033 176035 AATTATTCTGAGCCA GAAAGCATACGGGCAGCA TCA TGCTGCCCGTATATGTAC TCTTAATCGATGGTA TERM 210 176060 - 176030 - R 100 -14.8 -3.92075 | opp_overlap 176026 176024 176033 176035, overlap 176033 176035 ATTCTGAGCCAGAAA GCATACGGGCAGCA TCA TGCTGCCCGTATAT GTACTCTTAATCGAT TERM 211 176033 - 176057 + r 100 -18.7 -3.01637 | opp_overlap 176030 176033 176035, overlap 176026 176024 176035 CTGAGCCAGAAAGCA TACGGGCAGCA TCA TGCTGCCCGTA TATGTACTCTTAATC TERM 212 176057 - 176033 - R 100 -18.7 -3.02745 | opp_overlap 176033 176026 176024 176035, overlap 176030 176035 CTGAGCCAGAAAGCA TACGGGCAGCA TCA TGCTGCCCGTA TATGTACTCTTAATC TERM 213 176035 - 176055 + r 100 -16.9 -3.05727 | opp_overlap 176033 176030 176035, overlap 176033 176026 176024 GAGCCAGAAAGCATA CGGGCAGCA TCA TGCTGCCCG TATATGTACTCTTAA TERM 214 176055 - 176035 - R 100 -16.9 -3.06711 | opp_overlap 176035 176033 176026 176024, overlap 176033 176030 GAGCCAGAAAGCATA CGGGCAGCA TCA TGCTGCCCG TATATGTACTCTTAA dapD 176891 - 176067 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 215 176408 - 176427 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATGCCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC glnD 179594 - 176922 - | PII uridylyl-transferase TERM 216 179649 - 179634 - R 100 -11.8 -5.15634 | opp_overlap 179628 179634 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC TERM 217 179634 - 179649 + r 82 -11.8 -3.4758 | opp_overlap 179634, overlap 179628 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC map 180450 - 179656 - | methionine aminopeptidase TERM 218 180400 - 180410 + g 74 -2.4 -5.15381 | overlap 180389 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 219 181228 - 181217 - g 72 -7.2 -4.24413 | overlap 181214 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 180818 - 181543 + | 30S ribosomal protein S2 TERM 220 181536 - 181524 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCTT TERM 221 181718 - 181738 + F 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 222 181973 - 181957 - g 77 -3 -5.13521 | gap 1, overlap 181958 181961 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 181801 - 182652 + | elongation factor Ts TERM 223 182663 - 182684 + F 100 -13.7 -4.84761 | opp_overlap 182663 182666 CTTAATTATCAAAAA GGAGCCGCC TAAG GGCGGCTTC TTTTTGTGCCCATCT TERM 224 182684 - 182663 - f 100 -11.5 -4.81083 | opp_overlap 182663, overlap 182666 CTTAATTATCAAAAA GGAGCCGCC TAAG GGCGGCTTC TTTTTGTGCCCATCT TERM 225 182681 - 182666 - f 82 -11.8 -3.30145 | opp_overlap 182663, overlap 182663 AATTATCAAAAAGGA GCCGCC TAAG GGCGGC TTCTTTTTGTGCCCA pyrH 182799 - 183524 + | uridylate kinase frr 183816 - 184373 + | ribosome recycling factor TERM 226 184373 - 184353 - f 76 -8.3 -4.14627 | opp_overlap 184353 184354 184356, overlap 184354 184356 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 227 184353 - 184373 + F 76 -8.3 -4.15044 | opp_overlap 184353 184354 184356, overlap 184354 184356 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 228 184354 - 184372 + F 78 -11.8 -3.08812 | opp_overlap 184353 184354 184356, overlap 184353 184356 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 229 184372 - 184354 - f 78 -11.8 -3.08294 | opp_overlap 184354 184353 184356, overlap 184353 184356 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 230 184386 - 184434 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 184392, overlap 184387 184392 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 231 184387 - 184433 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 184392, overlap 184386 184392 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 232 184392 - 184428 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 184392, overlap 184387 184386 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 233 184428 - 184392 - f 100 -13 -4.98255 | gap 1, opp_overlap 184392 184387 184386 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 234 184914 - 184930 + G 70 -3.7 -4.64657 | ATTGTTACCGGTCGA TAGCG AACATAA CGCTA TTTTTCAGAGTTTAC yaeM 184465 - 185661 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 235 185766 - 185783 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG yaeS 185847 - 186608 + | undecaprenyl pyrophosphate synthase cdsA 186621 - 187478 + | CDP-diglyceride synthase yaeL 187490 - 188842 + | zinc metallopeptidase TERM 236 189381 - 189370 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 237 190077 - 190109 + G 71 -10.5 -2.8547 | opp_overlap 190081, overlap 190081 TGTCGATACCGATAC CCAACGTGTTCCGGG TAG CCCGGACCAGGTTGA TGTAGTCTACAAGGT TERM 238 190105 - 190081 - g 70 -9.9 -3.14026 | opp_overlap 190077 190081 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAGG TTGATGTAGTCTACA TERM 239 190081 - 190105 + G 72 -9.9 -3.31269 | opp_overlap 190081, overlap 190077 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAGG TTGATGTAGTCTACA yaeT 188872 - 191304 + | outer membrane protein assembly factor YaeT TERM 240 191403 - 191386 - f 71 -7.7 -3.96216 | overlap 191387 GGGCCACGCAAAGAA CTGCACC CTCC GGTGCAA ATGGGATGGTAAGGA TERM 241 191888 - 191860 - g 80 -11.8 -3.28712 | overlap 191846 191845 191876 CGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 191426 - 191911 + | periplasmic chaperone TERM 242 191993 - 191968 - g 82 -13.3 -2.97245 | opp_overlap 191966, overlap 191963 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 191915 - 192940 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 243 192967 - 193004 + F 95 -12.7 -4.07515 | overlap 192969 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 244 192969 - 193002 + F 90 -13.1 -3.60967 | overlap 192967 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 193045 - 193500 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 193504 - 194292 + | UDP-N-acetylglucosamine acyltransferase TERM 245 194326 - 194347 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG lpxB 194292 - 195440 + | lipid-A-disaccharide synthase TERM 246 195604 - 195593 - g 81 -7.2 -4.67011 | opp_overlap 195592 AAGCTGAGCGAAAAA CGCC GTCT GGCG CTCTATGAAGAGATC rnhB 195437 - 196033 + | ribonuclease HII dnaE 196070 - 199552 + | DNA polymerase III subunit alpha TERM 247 199718 - 199704 - g 74 -2.8 -5.00616 | GTCTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 199565 - 200524 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 248 200545 - 200562 + F 100 -9.1 -5.24129 | opp_overlap 200545 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 249 200562 - 200545 - f 80 -6.9 -4.61527 | opp_overlap 200545 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG ldcC 200623 - 202764 + | lysine decarboxylase 2 yaeR 202821 - 203210 + | hypothetical protein TERM 250 203230 - 203250 + F 83 -13.3 -3.24925 | TGTCATCGCCGCATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT tilS 203275 - 204573 + | tRNA(Ile)-lysidine synthetase TERM 251 204612 - 204580 - T 93 -12 -3.76952 | overlap 204600 CTTAGTTAAGTGAAA GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC GAAAGTCAATCAGGA yaeO 204882 - 204622 - | Rho-binding antiterminator yaeP 205087 - 204869 - | hypothetical protein TERM 252 204906 - 204919 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 253 205530 - 205517 - g 78 -8.1 -4.34737 | opp_overlap 205526, overlap 205519 CGACGAATTAAGAAA GCCTG CACC CAGGC CGCAGAAGTGGCGCT yaeQ 205235 - 205780 + | hypothetical protein yaeJ 205777 - 206199 + | hypothetical protein cutF 206213 - 206923 + | lipoprotein involved with copper homeostasis and adhesion TERM 254 207023 - 207054 + T 87 -10 -4.36914 | opp_overlap 207033, overlap 207024 TAGCACGATTTTGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTTGTGCACGAGGC TERM 255 207024 - 207053 + T 83 -13.5 -3.21934 | opp_overlap 207033, overlap 207023 AGCACGATTTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTTGTGCACGAGG yaeF 207902 - 207078 - | hypothetical protein TERM 256 207945 - 207925 - R 100 -13.3 -5.10497 | opp_overlap 207925 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC TERM 257 207925 - 207945 + r 87 -11.1 -3.89346 | opp_overlap 207925 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 209673 - 207955 - | prolyl-tRNA synthetase TERM 258 209721 - 209703 - R 79 -11 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA yaeB 210491 - 209784 - | hypothetical protein TERM 259 210338 - 210363 + g 83 -12.6 -3.29829 | gap 1 AATGGCTGAATGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGAAGCTATG TERM 260 210388 - 210400 + g 70 -4.7 -4.57073 | overlap 210389 GCTATGAGATGCAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 210892 - 210488 - | outer membrane lipoprotein TERM 261 210756 - 210766 + g 74 -8.2 -3.92659 | overlap 210749 210760 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 262 210977 - 210949 - R 74 -6 -4.58663 | gap 1, opp_overlap 210950, overlap 210952 210955 AGGAGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 263 210975 - 210952 - R 90 -14.6 -3.23975 | opp_overlap 210950, overlap 210949 210955 AGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 264 210972 - 210955 - R 93 -12.7 -3.75505 | opp_overlap 210950, overlap 210952 210949 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 211825 - 211010 - | DL-methionine transporter substrate-binding subunit yaeE 212518 - 211865 - | DL-methionine transporter permease subunit TERM 265 212458 - 212447 - G 79 -2.2 -5.24449 | CACAAACCCAAAAAA TCCG GATA CGAA GGTCATTGCCAGCGT metN 213542 - 212511 - | DL-methionine transporter ATP-binding subunit TERM 266 212832 - 212842 + g 77 -8.2 -4.13767 | overlap 212840 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA yaeD 213730 - 214305 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 267 214456 - 214442 - f 86 -4.2 -5.47159 | opp_overlap 214442, overlap 214443 214450 GTTGAAGAGAAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAATAG TERM 268 214455 - 214443 - f 71 -7.7 -3.87211 | opp_overlap 214442, overlap 214442 214450 TTGAAGAGAAAAAAT CCTGA AAT TCAGG GTTGACTCTGAAATA TERM 269 216534 - 216497 - f 93 -6.3 -5.68438 | opp_overlap 216499 216514, overlap 216499 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 270 216499 - 216532 + F 75 -6.7 -4.49756 | opp_overlap 216497 216499, overlap 216514 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 271 216532 - 216499 - f 86 -8.9 -4.47052 | opp_overlap 216499 216514, overlap 216497 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 272 216597 - 216573 - f 71 -8 -3.93061 | gap 1, opp_overlap 216580 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 273 216729 - 216716 - f 75 -6.7 -4.39571 | overlap 216720 GCTAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 274 216955 - 216931 - f 71 -8 -3.93061 | gap 1, opp_overlap 216938 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 275 217509 - 217497 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 276 219998 - 219977 - f 74 -8.7 -3.91196 | CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTAGC TERM 277 220272 - 220291 + F 86 -4.2 -5.50499 | opp_overlap 220272, overlap 220274 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGATG TTTTTTTGCGTCTGG TERM 278 220274 - 220289 + F 72 -5.4 -4.38666 | opp_overlap 220272, overlap 220272 ACTTATTAAGAAGCC TCGAGT TAAC GCTCGA TGTTTTTTTGCGTCT TERM 279 221186 - 221157 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 220422 - 221225 + | 2,5-diketo-D-gluconate reductase B TERM 280 221253 - 221282 + T 89 -9.3 -4.59109 | opp_overlap 221254, overlap 221255 GCTCCTCCGGGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 281 221281 - 221254 - T 81 -12.8 -3.14132 | opp_overlap 221253 221255 CTCCTCCGGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 282 221255 - 221280 + T 100 -16.3 -3.90762 | opp_overlap 221254, overlap 221253 TCCTCCGGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SF0193 222610 - 221264 - | IS4 orf TERM 283 222628 - 222597 - G 100 -13.9 -4.4017 | opp_overlap 222600 CCAATGTGCATAAAA GAATCCGGAAACA AGTGAG CGTTTCCGGATTC TTACACAGCCACTGG TERM 284 222600 - 222625 + g 73 -9.1 -3.61398 | opp_overlap 222597 ATGTGCATAAAAGAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC yafC 223574 - 222660 - | putative transcriptional regulator LYSR-type TERM 285 223785 - 223766 - H 82 -11.4 -3.54771 | opp_overlap 223750, overlap 223749 CCTATAACAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTAATAGAGG TERM 286 223881 - 223857 - g 72 -9.9 -3.28924 | opp_overlap 223856 223852 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 287 224480 - 224503 + G 82 -3.1 -5.18371 | overlap 224474 224475 224480 224478 CGATGATCAGCGCCG TCGGGCG TTTGGCCGCC CGCTCGA TTTTGTTTTCTACCG yafD 223815 - 224615 + | hypothetical protein TERM 288 224636 - 224661 + F 70 -4.7 -4.46212 | gap 1, opp_overlap 224620 224647 224648, overlap 224621 224620 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGTCC TTTTATACTCAAACA yafE 224843 - 225463 + | putative biotin synthesis protein TERM 289 225472 - 225492 + T 79 -4.6 -5.25699 | opp_overlap 225472 GGCATAAATAAAAAA GGCACCGG GGGAA TCGGTACC TTTTTATTATCTGGT TERM 290 225492 - 225472 - T 93 -6.1 -5.72622 | opp_overlap 225472 GGCATAAATAAAAAA GGCACCG GGGGAAT CGGTACC TTTTTATTATCTGGT dniR 226857 - 225511 - | membrane-bound lytic murein transglycosylase D TERM 291 226198 - 226235 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 226207, overlap 226207 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 292 226207 - 226227 + g 70 -4.6 -4.46669 | opp_overlap 226207, overlap 226198 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 227684 - 226929 - | hydroxyacylglutathione hydrolase TERM 293 227310 - 227298 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT yafS 227715 - 228440 + | hypothetical protein rnhA 228904 - 228437 - | ribonuclease H TERM 294 229686 - 229674 - g 87 -4.7 -5.24129 | CTGGTGCAGAAAAAA GGCGG AAG CTGCC TCTGGCGGGCATAAA dnaQ 228969 - 229700 + | DNA polymerase III subunit epsilon TERM 295 229915 - 229952 + T 95 -11.6 -4.26903 | gap 2, opp_overlap 229921, overlap 229916 229921 CGTTCCGCCAATATT C-A-GAAAGCCCGAATCA GTAA TGATTCGGGCTTTCGTCG TTTTGGTGAAGTGAG TERM 296 229916 - 229949 + T 100 -16.9 -3.13772 | opp_overlap 229921, overlap 229915 229921 GTTCCGCCAATATTC AGAAAGCCCGAATCA GTAA TGATTCGGGCTTTCG TCGTTTTGGTGAAGT TERM 297 229944 - 229921 - T 100 -15.4 -3.9777 | opp_overlap 229916 229915 229921 GCCAATATTCAGAAA GCCCGAATCA GTAA TGATTCGGGC TTTCGTCGTTTTGGT TERM 298 229921 - 229944 + T 100 -15.4 -3.93659 | opp_overlap 229921, overlap 229916 229915 GCCAATATTCAGAAA GCCCGAATCA GTAA TGATTCGGGC TTTCGTCGTTTTGGT TERM 299 230033 - 230008 - T 100 -9.9 -5.11613 | gap 1, opp_overlap 230008 230007 ATATGATTTAAAAAA TGGCCAGACATT ATA AAT-TCTGGCCA CTTCTGTTACTCCAG safA 231086 - 230040 - | putative cytoplasmic protein safB 231659 - 231354 - | periplasmic chaperone of fimbral assembly machinery safC 233539 - 231656 - | outer membrane usher protein TERM 300 232067 - 232038 - G 77 -7.2 -4.53034 | gap 1, overlap 232044 GGCAGATAATTAAAA GATAAC-TGGCGG ATCAA CCGCCATGCCATC TCACGTTCAGCCATC TERM 301 232302 - 232322 + g 70 -4.5 -4.46212 | CCCGTATAGGGGGTA CGGGTGCCG TAA CGGCGGGCG TTTTCTGATAAGCGG TERM 302 232352 - 232334 - G 80 -11.6 -3.28712 | GGCGTTTTCTGATAA GCGGCGGG GCT CCCGGCGC AGGGAAAAATAACGT TERM 303 233085 - 233105 + g 75 -11.8 -3.08679 | overlap 233087 GCAGGCATATCCGGT GGCGCGGC GGTCA GTCGCGCC TCTTCGATGGCGAGC SF0205 234049 - 233555 - | putative cytoplasmic protein sat1 234876 - 234244 - | putative cytoplasmic protein sat2 235240 - 234863 - | putative cytoplasmic protein SF0208 235777 - 235478 - | putative cytoplasmic protein SF0209 235830 - 236240 + | insertion sequence 2 OrfA protein SF0210 236198 - 237103 + | insertion element IS2 transposase InsD SF0211 237447 - 237160 - | hypothetical protein SF0212 237982 - 237461 - | IS911 ORF2 TERM 304 237869 - 237880 + gr 77 -5.8 -4.63218 | opp_overlap 237865 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG SF0213 238301 - 237951 - | IS911 ORF2 TERM 305 238222 - 238242 + gr 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF0214 238666 - 238328 - | IS911 ORF1 TERM 306 239684 - 239670 - g 70 -5 -4.56597 | GCCGCTTCGCAAAAA TGATGC GCG ACATCA AAAAACCAAAAGAGA SF0215 238841 - 239743 + | putative terminase large subunit TERM 307 240071 - 240057 - g 70 -10 -3.22102 | overlap 240055 ATATGCGCCATAACA CGGCAA AGA TTGCCG TTAACGTTGGCGTTC SF0216 239744 - 241909 + | putative packaging glycoprotein TERM 308 242606 - 242587 - g 81 -8.6 -4.4017 | gap 1, overlap 242589 CTAATCCTGAGAAAA CA-CGCCAG TTG CTGGCGATG GACGGGCAATCCGCG TERM 309 242603 - 242589 - g 88 -11.4 -3.80535 | overlap 242587 AATCCTGAGAAAACA CGCCAG TTG CTGGCG ATGGACGGGCAATCC SF0217 241923 - 242834 + | putative scaffolding protein TERM 310 242919 - 242899 - g 72 -9.7 -3.31322 | overlap 242900 CGGAACCGTCCAGAA CCTGACGCC AAT GGCGTCAAA AGTGACAAAATACCC TERM 311 243839 - 243803 - g 72 -6 -4.42386 | gap 1, opp_overlap 243806, overlap 243806 GCGTCACTGACAAAA GAAGAGAAG-GCTTACG CTAA CGTAAACACCTCTCTTG CTGATACCACTCCGG TERM 312 243836 - 243806 - g 78 -7.7 -4.33182 | gap 1, opp_overlap 243806, overlap 243803 TCACTGACAAAAGAA GAGAAG-GCTTACG CTAA CGTAAACACCTCTC TTGCTGATACCACTC SF0218 242834 - 244129 + | putative coat protein TERM 313 244137 - 244154 + F 85 -6.9 -4.96848 | opp_overlap 244138, overlap 244138 CCGCGTGATAACCAG AGGGAGC TTCG GCTCCCG TTTTTATCTGGAGAC TERM 314 244153 - 244138 - f 73 -10.4 -2.96274 | opp_overlap 244137 244138 CGCGTGATAACCAGA GGGAGC TTCG GCTCCC GTTTTTATCTGGAGA TERM 315 244138 - 244153 + F 79 -10.4 -3.57627 | opp_overlap 244138, overlap 244137 CGCGTGATAACCAGA GGGAGC TTCG GCTCCC GTTTTTATCTGGAGA SF0219 244174 - 244404 + | hypothetical protein SF0220 244382 - 244882 + | putative DNA stabilization protein SF0221 244882 - 246300 + | putative packaged DNA stabilization protein SF0222 246300 - 247148 + | putative packaged DNA stabilization protein SF0223 247148 - 247603 + | putative head assembly protein SF0224 247606 - 248298 + | putative DNA transfer protein SF0225 248308 - 249639 + | putative prophage DNA injection protein TERM 316 250780 - 250760 - g 76 -7.6 -4.1891 | CTGCGCCAACAGAAA CATCACCA TTCTC CGGTGATG CCGCTGCAGCAACAA TERM 317 251284 - 251270 - g 81 -7.2 -4.59773 | CTGCAGGTGCAAAAA TTGATG CGC CATCAA CAAGGTCAATGCTCA SF0226 249640 - 251370 + | putative DNA transfer protein SF0227 251496 - 251822 + | IS629 ORF1 TERM 318 252138 - 252126 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SF0228 252037 - 252705 + | IS629 ORF2 psiF 253094 - 252756 - | hypothetical protein TERM 319 253190 - 253159 - R 100 -14.4 -5.63374 | opp_overlap 253159 253158 253180, overlap 253160 CTAACAGCAAAAAAA CCACCCGGCAGCGA AAAT TCACTGCCGGGCGC AGTTTTATTTCAGCC TERM 320 253189 - 253160 - R 100 -17.9 -3.96398 | opp_overlap 253159 253158 253180, overlap 253159 TAACAGCAAAAAAAC CACCCGGCAGCGA AAAT TCACTGCCGGGCG CAGTTTTATTTCAGC TERM 321 253180 - 253192 + r 76 -4.8 -4.86731 | opp_overlap 253160 253159, overlap 253159 253158 GGCAGCGAAAATTCA CTGC CGGGC GCAG TTTTATTTCAGCCCC phoA 254679 - 253195 - | alkaline phosphatase TERM 322 254367 - 254335 - G 77 -3.3 -5.04385 | GATACCTTTAAAAAA GCCGCCCGCACCT TCGGCAT AATTACGTGCGGC AGTAATTTCCGAATC TERM 323 254668 - 254654 - G 84 -4.2 -5.21459 | overlap 254656 254664 AAAAATAAAAACAAA GCGACT ATA AGTCTC GGCCGTGACAACTTT yaiB 254971 - 254711 - | hypothetical protein TERM 324 255544 - 255534 - g 75 -6.8 -4.42653 | opp_overlap 255534 255533 ATGCCATTGATAAAA GTCG CTT CGAC GTTGTGCTGCTGGGC TERM 325 256329 - 256342 + G 70 -4.5 -4.56597 | GATGCGCAGGCATGG CGCGT GTAG ACGTG TTTTTAACCCCAGAG ddl 255434 - 256528 + | D-alanyl-alanine synthetase A TERM 326 256537 - 256561 + T 93 -10.8 -4.42851 | AATGTAATATTTTAA CGCCCGATAA TATTC TTATTGGGCG TTTTCAGTTTCTTCA SF0233 256896 - 256552 - | hypothetical protein TERM 327 257082 - 257110 + G 77 -8.2 -4.13711 | gap 1, overlap 257085 ATCGCAATGCCTCTT CAACGCCT-GGCA ACAT TGCCTATGCGTTG TTTGTGCTGTTTTGC TERM 328 257251 - 257263 + G 74 -6.2 -4.57569 | TGTCGGCACCATTTT CGGG CTGAT CCCG TTTTTAGCAGGCTGC SF0234 257024 - 257332 + | hypothetical protein yaiW 258485 - 257391 - | hypothetical protein sbmA 259718 - 258498 - | transport protein TERM 329 261220 - 261193 - g 75 -11.4 -3.07816 | gap 1 TGGTGACCGAGCTAA GCGGGAATAAACC GTT GGTT-ATCCCCGC ATCCTGATTAATACT yaiH 260070 - 261227 + | beta-lactamase/D-alanine carboxypeptidase TERM 330 261237 - 261273 + T 86 -11.8 -3.55866 | gap 1, opp_overlap 261248, overlap 261241 TCCTGATTAATACTC TGAAGGCAAAC-GGTTG ATAG CGACCAGTTTGCCTTTA TTCATTTCGATATAG TERM 331 261241 - 261269 + T 93 -10.4 -4.40298 | gap 1, opp_overlap 261248, overlap 261237 GATTAATACTCTGAA GGCAAAC-GGTTG ATAG CGACCAGTTTGCC TTTATTCATTTCGAT yaiV 261776 - 261228 - | hypothetical protein TERM 332 261749 - 261778 + g 100 -18.1 -3.78409 | opp_overlap 261752, overlap 261752 GCGCGTCCTTTGCAG TAATGCCCGTCAA ATCC TTGACGGGCATTA TTTAGATTAAATTAC TERM 333 261775 - 261752 - G 100 -15.4 -3.14132 | opp_overlap 261749 261752 CGTCCTTTGCAGTAA TGCCCGTCAA ATCC TTGACGGGCA TTATTTAGATTAAAT TERM 334 261752 - 261775 + g 100 -15.4 -4.01381 | opp_overlap 261752, overlap 261749 CGTCCTTTGCAGTAA TGCCCGTCAA ATCC TTGACGGGCA TTATTTAGATTAAAT SF0240 263178 - 262366 - | hypothetical protein SF0241 264270 - 263452 - | IS600 ORF2 SF0242 264608 - 264306 - | IS600 ORF1 SF0243 265410 - 264841 - | hypothetical protein SF0244 266290 - 265385 - | insertion element IS2 transposase InsD SF0245 266613 - 266248 - | insertion sequence 2 OrfA protein insA 266737 - 267012 + | IS1 ORF1 insB 267039 - 267434 + | IS1 ORF2 SF0248 267850 - 267479 - | hypothetical protein hemB 268341 - 269348 + | delta-aminolevulinic acid dehydratase tauD 270305 - 269454 - | taurine dioxygenase TERM 335 269648 - 269637 - G 86 -5.8 -5.06816 | opp_overlap 269637 ATGGGCGAATAAAAA GCCT AACA AGGC TTCGCTCTCTTTCTC TERM 336 270130 - 270118 - G 81 -9.1 -4.08767 | TGCAGTTCGCCAAAA CGCTG GGC CAGCG CGCGTTGCTGCTGCG tauC 271129 - 270302 - | taurine transporter subunit TERM 337 270401 - 270371 - G 88 -8.2 -4.65933 | CAGTTCTAAAAGAAA GGCGATAATCGCAA TCA CCGCGATCCCCGCC AGTACCACGTCAGTC TERM 338 270468 - 270456 - G 84 -10.5 -3.74749 | ACCATAAATCCTAAA CCGCG TGT CGCGG CAATCAGCTCCGCCG tauB 271893 - 271126 - | taurine transporter ATP-binding subunit TERM 339 271488 - 271447 - G 84 -10.8 -3.71848 | TTCGTCGAGTAATAA CAGCTGGGGATTCGCCGC CAGCGC GCGGGCAATCCCCACCCG CTGACGTTGACCATC TERM 340 271565 - 271586 + g 77 -5.9 -4.61868 | gap 1, overlap 271568 TTTTTCAGCATCTGG TGC-GCGATT TCC AGTCGCTGCA TTTTCTCTATACCTG tauA 272802 - 271906 - | taurine transporter substrate binding subunit insB 273755 - 273360 - | IS1 ORF2 insA 274057 - 273782 - | IS1 ORF1 TERM 341 274171 - 274181 + H 82 -5.4 -5.19275 | opp_overlap 274171 ATTAATACAACATTA TCTG CGA CAGA TTTTATTTTCTGGAT TERM 342 274683 - 274699 + G 78 -10.9 -3.48395 | opp_overlap 274679 274675 CAAAAATGATATACC TGACCAG GAA CTGGTCA TTGTATCCGAACGGT TERM 343 274851 - 274836 - g 85 -3.3 -5.40072 | GCCTTGTCAAAAAAA TGGTA GATGAA TACCA ACAAAACTCTGGGCA ykgH 274202 - 274870 + | hypothetical protein TERM 344 274999 - 274973 - T 88 -12.4 -3.59979 | opp_overlap 274973 CTTTTTCACTGTAAA TATCCTGGCATT ACT AATGCCTGGATA TTTACAGAAGAGCAG TERM 345 274973 - 274999 + T 88 -12.4 -3.53012 | opp_overlap 274973 CTTTTTCACTGTAAA TATCCTGGCATT ACT AATGCCTGGATA TTTACAGAAGAGCAG ykgG 275808 - 275113 - | putative transporter ykgF 277228 - 275801 - | hypothetical protein TERM 346 276980 - 277000 + g 71 -3.3 -4.83615 | gap 1, opp_overlap 276977 276980 TTTTGCAAAATAGAC GTGACCGC CGTTTT GCG-TCAC TTTTTCTGAGAGCTG ykgE 277958 - 277239 - | putative dehydrogenase subunit insA 278377 - 278652 + | IS1 ORF1 insB 278679 - 279074 + | IS1 ORF2 TERM 347 279115 - 279102 - f 74 -3.9 -5.05153 | opp_overlap 279102 ACCTGAAAAAACAAA TATTG ATGG CAATA TCATTATACATAAGG SF0263 279259 - 279744 + | hypothetical protein SF0264 279741 - 280127 + | hypothetical protein TERM 348 281427 - 281438 + G 70 -4.4 -4.58663 | opp_overlap 281417, overlap 281422 GAATATCTGCTGGTA CAGA CCAC TCTG TTTTTACGGGATAAT TERM 349 282111 - 282095 - g 82 -2.2 -5.32882 | opp_overlap 282082 CACCATCACAAAAAA TGATGG TCTTT CCGTCA AACTGGCTCAAACCA SF0265 280152 - 282365 + | putative Rhs-family protein TERM 350 282404 - 282437 + F 80 -6.9 -4.71426 | overlap 282407 TGACCAGCCTTTACC GTATTCAGG-AGGGC TGCTTT GCCCTGCCTGAA-AC TTTTCTTGATCGCAC TERM 351 282745 - 282766 + F 79 -8.7 -4.30576 | opp_overlap 282743, overlap 282746 CAAAGGTACTAATGT TGACGCTGA CCAC TCAGCGTCC TTTTGATGATCACAC TERM 352 282746 - 282765 + F 81 -12.2 -3.18024 | opp_overlap 282743, overlap 282745 AAAGGTACTAATGTT GACGCTGA CCAC TCAGCGTC CTTTTGATGATCACA SF0266 282855 - 283262 + | putative Rhs-family protein TERM 353 283876 - 283888 + G 86 -10.5 -3.88001 | TGAATTTGATGACCA CGGCG TCG CGCCG TTACTTTTTATGGAG TERM 354 285275 - 285259 - g 71 -9.3 -3.48024 | overlap 285237 285235 285257 CGGCAGTATCAAATA CCGGCGC GAT GCGCTGG GCAATCCCACCGATA SF0267 283259 - 285547 + | putative Rhs-family protein SF0268 285544 - 286533 + | putative Rhs-family protein TERM 355 287201 - 287229 + T 83 -4.5 -5.38549 | opp_overlap 287193 287202, overlap 287202 ATAGCAACGATAATA ACCGGAAATTTCT TCC AGATCTTTCCGGC TTTTTATTATTTAAC TERM 356 287228 - 287202 - T 71 -8 -3.90241 | opp_overlap 287201 287202, overlap 287193 TAGCAACGATAATAA CCGGAAATTTCT TCC AGATCTTTCCGG CTTTTTATTATTTAA yafV 288352 - 287582 - | hypothetical protein TERM 357 288065 - 288045 - G 74 -3.1 -4.91109 | overlap 288049 CGCTTATCATAAAAA TGTACCGTG CCG CCCGGCTCA ACCAGCAAAAAGCGG ykfE 288506 - 288979 + | vertebrate C-lysozyme inhibitor TERM 358 288996 - 289013 + T 93 -12.7 -3.73068 | opp_overlap 288996 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG TERM 359 289013 - 288996 - T 100 -12.7 -4.56367 | opp_overlap 288996 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG fadE 291466 - 289022 - | acyl-CoA dehydrogenase TERM 360 290500 - 290514 + g 73 -11.4 -2.73364 | opp_overlap 290498 GGCGACGACCAATTT CCACGC CCG GCGTGG TGGTTGGGATCAGCG TERM 361 291115 - 291134 + g 70 -4.2 -4.62069 | overlap 291099 CAGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 362 291943 - 291924 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 291924 291925, overlap 291925 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCTATTTCTGACG gmhA 291706 - 292284 + | phosphoheptose isomerase TERM 363 292295 - 292327 + F 73 -9.8 -3.34043 | gap 1, opp_overlap 292286 292305 292306, overlap 292295 292306 AGTAAGTCTGGCGTA G-GCCGGATAAGGCG TTTA CGCCGCATCCGGCAC TTGTGCGCTGATGCC TERM 364 293217 - 293196 - g 74 -8.7 -3.91084 | opp_overlap 293211, overlap 293212 TGACGGGCAATGAAA CCTGGCAAA AAAT TATGCCAGG CGAATGGCGCTTATT yafJ 292490 - 293257 + | putative amidotransferase yafK 293968 - 293228 - | hypothetical protein yafM 295049 - 295546 + | hypothetical protein fhiA 297502 - 295763 - | flagellar biosynthetic protein FlhA TERM 365 296955 - 296936 - Gf 76 -5 -4.87626 | gap 1 GCTGAACAGCAAAAA CGGCAGATG CGG CATCC-CCG GCACCACCGCCAGCA mbhA 297447 - 298232 + | hypothetical protein dinP 298303 - 299358 + | DNA polymerase IV TERM 366 299600 - 299589 - g 76 -3.6 -4.9934 | ACAAGAGGAGAAAAA GCCC ATAA AGGC GCGCTTTCGTCCAAG yafN 299410 - 299703 + | putative antitoxin of the YafO-YafN toxin-antitoxin system yafO 299706 - 300104 + | putative toxin YafO yafP 300114 - 300566 + | hypothetical protein TERM 367 300782 - 300756 - f 79 -10.3 -3.63515 | opp_overlap 300746 TGTTACTCTCAATAA TTCAAGTCGCA GCACA TGCAACTTGAA GTATGACGAGTCTAT SF0283 300812 - 301855 + | hypothetical protein prfH 301971 - 302426 + | peptide chain release factor 2 TERM 368 302575 - 302544 - T 100 -17.3 -3.86776 | TAATGAAGGATGAAA CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG CAAATCAAATAATTA pepD 304045 - 302588 - | aminoacyl-histidine dipeptidase (peptidase D) TERM 369 302707 - 302728 + g 71 -2.2 -5.00616 | opp_overlap 302707 TTGGCCCGATAGAAA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGACC TERM 370 303643 - 303653 + g 72 -6.8 -4.25104 | GCACTTCCAGCGGGC CGTG AAC CACG TTTTCGTCAGCCAGA TERM 371 304026 - 304003 - G 90 -9 -4.57837 | gap 1, opp_overlap 304005 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG gpt 304307 - 304765 + | xanthine-guanine phosphoribosyltransferase TERM 372 304769 - 304799 + F 84 -7.4 -4.74103 | overlap 304772 TCCGGTCGCTAATCT TTTCAACGCCTGGC ATT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 373 304772 - 304796 + F 100 -17.9 -4.47888 | overlap 304769 GGTCGCTAATCTTTT CAACGCCTGGC ATT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 374 305382 - 305405 + G 72 -4.4 -4.70659 | overlap 305383 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 304857 - 306101 + | fermentation/respiration switch protein crl 306159 - 306560 + | DNA-binding transcriptional regulator Crl TERM 375 306592 - 306567 - T 72 -9.1 -3.64822 | gap 1, opp_overlap 306567 306568 306569, overlap 306568 ACGGCGTGAGTGAAA TGTGCCGGATGC ATC ACATCCGGCA-A TATTCATTAAAACTG TERM 376 306568 - 306592 + T 71 -10 -3.24329 | opp_overlap 306567 306568, overlap 306567 306569 CGGCGTGAGTGAAAT GTGCCGGATG CATCA CATCCGGCAA TATTCATTAAAACTG TERM 377 306592 - 306568 - T 72 -10.7 -2.78679 | opp_overlap 306567 306568 306569, overlap 306567 CGGCGTGAGTGAAAT GTGCCGGATGC ATC ACATCCGGCAA TATTCATTAAAACTG TERM 378 306569 - 306591 + T 80 -13.5 -2.54276 | opp_overlap 306567 306568, overlap 306568 306567 GGCGTGAGTGAAATG TGCCGGATG CATCA CATCCGGCA ATATTCATTAAAACT phoE 307654 - 306599 - | outer membrane phosphoporin protein E TERM 379 307196 - 307216 + g 76 -9 -3.79519 | gap 1 GTCGGTGTTCCGATA CGTCGCCAG ACCG CTGGCG-CG TTTGGTCATAAAGTT TERM 380 307361 - 307371 + g 79 -2.4 -5.21709 | TTTCAACCCGGCAAA AGCG AGA CGCG TTTTTTGCTGTGCAG insA 307830 - 308105 + | IS1 ORF1 insB 308132 - 308527 + | IS1 ORF2 proB 308718 - 309821 + | gamma-glutamyl kinase proA 309833 - 311086 + | gamma-glutamyl phosphate reductase TERM 381 311093 - 311147 + T 72 -8.4 -3.69437 | opp_overlap 311093, overlap 311146 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 382 311147 - 311093 - T 88 -8.4 -4.86731 | opp_overlap 311093 311146 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG SF0294 311755 - 311291 - | putative phage integrase SF0295 312600 - 311782 - | IS600 ORF2 SF0296 312938 - 312636 - | IS600 ORF1 SF0297 313720 - 312995 - | putative phage integrase TERM 383 313377 - 313392 + g 70 -4.7 -4.48221 | TTCCAGTTTTCCTCA TGACG CCGGTT CGTCA TTTTCTGCATTGCTG yfdT 314252 - 313947 - | hypothetical protein SF0299 314629 - 314252 - | hypothetical protein SF0300 315263 - 314595 - | IS629 ORF2 TERM 384 315162 - 315174 + gr 72 -4.8 -4.56597 | overlap 315152 GGCTTTCCGGCCGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF0301 315804 - 315478 - | IS629 ORF1 SF0302 316047 - 316349 + | IS600 ORF1 SF0303 316385 - 317203 + | IS600 ORF2 SF0304 317312 - 317605 + | integrase gtrAI 317867 - 318229 + | putative flippase gtrBI 318226 - 319155 + | putative bactoprenol glucosyl transferase TERM 385 320278 - 320253 - g 78 -8.5 -4.2074 | CTCGCAAGACAGAAA GATATCTCTTT AGCT AAAGAAATATC ATACACATCTCAAAC gtrII 319152 - 320612 + | putative glucosyl tranferase II TERM 386 320705 - 320719 + T 72 -8.5 -3.68619 | opp_overlap 320702 TCACAAATAGACGGA GGGGC TGAAT GCCCC TTTAAATACCTTACA TERM 387 321037 - 321009 - T 74 -10.4 -3.21595 | gap 1, opp_overlap 321025 321029 AATTTTCATCAGTAA GCCAGCACCATAC TTCG GTA-AGTGCTGGC CAACCGGCACAATAT SF0308 322192 - 321002 - | hypothetical protein TERM 388 323644 - 323677 + G 78 -5.3 -4.7373 | gap 1, opp_overlap 323644 TGTATCAGATAAAAT TGGC-CATTGGCTATC GAG GACAGTCGGTGGGCCA TTTTTGATAAAATGA SF0309 322643 - 323692 + | hypothetical protein TERM 389 323724 - 323690 - T 100 -12.5 -4.37886 | gap 1, opp_overlap 323699, overlap 323691 323693 323699 CCATTTTTGATAAAA TGATAAAAAGGCGCAA TTAA TTGCGCCTTTTTAT-A GATATATAGCGCATA TERM 390 323724 - 323691 - T 86 -14.1 -3.2241 | opp_overlap 323699, overlap 323690 323693 323699 CATTTTTGATAAAAT GATAAAAAGGCGCAA TTAA TTGCGCCTTTTTATA GATATATAGCGCATA TERM 391 323722 - 323693 - T 100 -16.7 -3.1733 | opp_overlap 323699, overlap 323690 323691 323699 TTTTTGATAAAATGA TAAAAAGGCGCAA TTAA TTGCGCCTTTTTA TAGATATATAGCGCA TERM 392 323716 - 323699 - T 100 -11.3 -5.10601 | opp_overlap 323699, overlap 323693 323690 323691 ATAAAATGATAAAAA GGCGCAA TTAA TTGCGCC TTTTTATAGATATAT TERM 393 323699 - 323716 + T 100 -11.3 -4.90455 | opp_overlap 323699 323693 323690 323691 ATAAAATGATAAAAA GGCGCAA TTAA TTGCGCC TTTTTATAGATATAT SF0310 324899 - 324465 - | putative phage tail fibre protein TERM 394 324622 - 324638 + gT 73 -3.7 -4.74518 | ATTACATTCGTTGCC TCTGC TATCAGT GCAGA TTTCTTTTCATCATT SF0311 325521 - 324871 - | hypothetical protein SF0312 326392 - 325574 - | IS600 ORF2 SF0313 326730 - 326428 - | IS600 ORF1 TERM 395 327259 - 327244 - g 70 -4.7 -4.48221 | CAGCAATGCAGAAAA TGACG AACCGG CGTCA TGAGGAAAACTGGAG SF0314 326916 - 328079 + | putative phage integrase TERM 396 328335 - 328302 - f 71 -10.4 -2.60061 | opp_overlap 328302 328296 328304 328308, overlap 328301 328304 328308 ACATTCACAGAAGAG CACAAAGCCTTGCA ATCCAG TGCAAAGCTTGGTG TGTCTCCGTTTTGTT TERM 397 329066 - 329081 + G 75 -4.7 -4.86613 | TTACATGGTTATGAT TAGCG CAATAT CGCTA TTTGTTTTCATTTTA SF0315 328428 - 329600 + | hypothetical protein SF0316 330277 - 329654 - | hypothetical protein TERM 398 329833 - 329811 - G 79 -9.8 -3.75378 | ATCTGCACAATATAA CCGCTAGCAA CTG CTGCGAGCGG ATGAGAAAAGCTAAC SF0317 331222 - 330404 - | IS600 ORF2 SF0318 331620 - 331258 - | IS600 ORF1 SF0319 332254 - 331586 - | IS629 ORF2 TERM 399 332153 - 332165 + gr 72 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF0320 332795 - 332469 - | IS629 ORF1 TERM 400 332858 - 332891 + H 95 -11.7 -3.86944 | CGGTTCAGATAGTGC TAACGGGTGAGCTAC GAAA GTGGCTCACCCGAAA TTTCATACTTCTGCC TERM 401 333347 - 333369 + G 86 -12.7 -3.5241 | overlap 333355 333360 333362 TCTGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 402 333355 - 333371 + G 81 -10.1 -3.87373 | overlap 333347 333360 333362 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG TERM 403 334069 - 334029 - g 95 -9.9 -4.65182 | gap 3 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC GAAAGTCATCAGGAT yaiC 332946 - 334061 + | diguanylate cyclase AdrA proC 334887 - 334078 - | pyrroline-5-carboxylate reductase yaiI 335007 - 335465 + | hypothetical protein TERM 404 335531 - 335547 + F 83 -2.3 -5.64421 | GGGATGTATTGAGAT TTTTACT TTA AGTGGAA TTTTTTCTTTACAAT TERM 405 335888 - 335832 - g 74 -7.7 -4.03234 | opp_overlap 335832 335833, overlap 335833 TTCGCGCCAGAGAAA CGGCGGCGCTGGAAGCGGTAACTGCGG CAT CCACCGTTATCGCTACAGGCGGCGGCA TTATTCTGACGGAAT TERM 406 335833 - 335887 + G 71 -11.2 -2.87146 | opp_overlap 335833 335832, overlap 335832 TCGCGCCAGAGAAAC GGCGGCGCTGGAAGCGGTAACTGCGG CAT CCACCGTTATCGCTACAGGCGGCGGC ATTATTCTGACGGAA aroL 335648 - 336172 + | shikimate kinase II yaiA 336222 - 336413 + | hypothetical protein TERM 407 336476 - 336486 + F 76 -4 -4.94902 | CTGCGTCACATTTTT CATA ATT TATG TTTTTCTAATAATTA aroM 336671 - 337348 + | hypothetical protein yaiE 337420 - 337704 + | hypothetical protein TERM 408 337710 - 337734 + F 80 -6.3 -4.8667 | overlap 337711 337726 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATATC TERM 409 337711 - 337733 + F 75 -9.8 -3.51279 | overlap 337710 337726 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATAT SF0328 337913 - 338194 + | hypothetical protein SF0329 338191 - 338646 + | hypothetical protein rdgC 339635 - 338724 - | recombination associated protein TERM 410 339185 - 339197 + g 77 -3.3 -5.03314 | overlap 339170 TACGCAGTAATGCCA GCGTA TCT TCCGC TTTTTTGGCACTGGC yajF 339760 - 340668 + | fructokinase TERM 411 340673 - 340715 + T 71 -9.9 -3.21924 | gap 1, opp_overlap 340673 340677, overlap 340671 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC-GCG TCTTATCAGGCCTAC TERM 412 340715 - 340673 - T 85 -5.5 -5.30189 | gap 1, opp_overlap 340673 340671, overlap 340677 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCCG-CG TCTTATCAGGCCTAC TERM 413 340712 - 340677 - T 73 -10.4 -2.949 | opp_overlap 340673 340671, overlap 340673 AGAGTAAAAAACGTA GGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC GCGTCTTATCAGGCC araJ 341992 - 340811 - | protein AraJ TERM 414 341529 - 341519 - G 74 -2.4 -5.14163 | AGCGATCAATAAAAA GGTG TAA CGCC AGCATTCCTGACTTA TERM 415 341588 - 341629 + g 78 -9.4 -3.96337 | gap 1, opp_overlap 341596 341597 341599, overlap 341598 ATTGGCGACTGTCAT CCCGGAAACCATCCCCGCC ACGGC GGCGGTGACT-TTTCCGGG TTTGATAATTTTTGA TERM 416 341684 - 341672 - G 77 -3.3 -5.0538 | overlap 341673 341674 TCCGACGCCAAAAAA TGCGC CAT GCGGA AAGCCGGATACCAGC sbcC 345261 - 342118 - | exonuclease subunit SbcC TERM 417 342468 - 342482 + g 73 -11.4 -2.77962 | overlap 342467 342474 CAACAACCTCGACTT CCAGCG CCT CGCTGG CTTTGCGCTGTAACA TERM 418 342983 - 343014 + g 81 -7.3 -4.60924 | gap 1, opp_overlap 342978 TCGTCAAAGACGCTG GCCTGTAGCGCGGT GTCAA ACTGCGCT-TGGGC TTTTTGCAGACTTTG TERM 419 343772 - 343787 + g 85 -10.4 -4.25848 | GCCTGTAACTGTGCA CGCTGG GCTT CCAGCG TTTTGATGCGCGCTT TERM 420 344415 - 344436 + g 87 -5 -5.29445 | opp_overlap 344415 GTTGTGCCAGACTAA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 346460 - 345258 - | exonuclease subunit SbcD TERM 421 345867 - 345883 + g 70 -6.5 -4.25104 | opp_overlap 345866 345862 345867, overlap 345845 CGTGCCAATATAAAT GTCACGC ACG GCGTCAC TTTTACTGGAACCCA phoB 346650 - 347339 + | transcriptional regulator PhoB TERM 422 347448 - 347474 + G 82 -2.8 -5.28481 | overlap 347446 347462 GAGCTGCTACTTTGC TGCCTCCCGGCT TTC ATCCTGGGTGCA TTTTTTGGTTACCTG phoR 347397 - 348692 + | phosphate regulon sensor protein TERM 423 348719 - 348740 + F 100 -13.1 -4.88918 | opp_overlap 348722 CATCTTTTATTGCCA TAAGCCAGC CGAT GCTGGCTTA TTTTCTTTGCAGTCA TERM 424 348737 - 348722 - f 77 -10.4 -3.31144 | opp_overlap 348719 CTTTTATTGCCATAA GCCAGC CGAT GCTGGC TTATTTTCTTTGCAG TERM 425 349372 - 349384 + G 72 -6.9 -4.18018 | ACGGTTTGTTACCTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 349099 - 350418 + | branched-chain amino-acid transport system II carrier protein TERM 426 350440 - 350463 + F 100 -15.3 -5.64304 | opp_overlap 350443 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 350494 - 351867 + | putative proline-specific permease TERM 427 351884 - 351912 + F 88 -14.6 -3.02829 | opp_overlap 351871 ACTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTATC TERM 428 352189 - 352226 + G 83 -12.8 -3.32022 | opp_overlap 352183 352180 GCATAAGCAGCGCAG TCAGCCGCA-GCCAGGCG TCAC CGCATGGCGTGCGGC-GA TTGATCTCTCCAGCG TERM 429 352361 - 352394 + G 82 -3.1 -5.26918 | gap 1, overlap 352362 352388 TTTGCCGTCGATGTA CCTGATAT-CGGCCCA CAA TGGGCTGCGGATCAGA TTTTTTATCAGATCT malZ 352022 - 353839 + | maltodextrin glucosidase yajB 354275 - 353844 - | putative glycoprotein TERM 430 354823 - 354807 - g 74 -10.1 -3.53091 | overlap 354816 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGTTGCTGGG TERM 431 355046 - 355026 - g 72 -4.6 -4.70659 | gap 1, opp_overlap 355032 355037, overlap 355027 355028 GTTTATAGCGAAAAA CCGGGC-GC GGTT GCAGCCCCG ACCGCTGGTCTGCAT TERM 432 355037 - 355060 + G 70 -6.6 -4.0896 | opp_overlap 355028 355026 355027, overlap 355032 355046 AAAACCGGGCGCGGT TGCAGCCCCG ACCG CTGGTCTGCA TTTTGACGAGCCTTT TERM 433 355329 - 355319 - g 83 -5.4 -5.02476 | ACAGGCGGCAAAAAA CGAT CTT ATCG AACCGTTCTTTGACG queA 354510 - 355580 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 434 355698 - 355714 + G 70 -5.1 -4.33785 | overlap 355695 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 355635 - 356762 + | queuine tRNA-ribosyltransferase yajC 356785 - 357117 + | preprotein translocase subunit YajC TERM 435 357706 - 357660 - g 73 -3.8 -4.86731 | opp_overlap 357700, overlap 357663 357664 357666 TGTTCGTAAAGAAAA CAACTACG-GCCTGAGCATCAC TTTCC GCGATGCTAAAGCTCGT-GATG AAGCCATTGCGTATC TERM 436 358239 - 358224 - g 71 -9 -3.54029 | CTTCACCAAGGACAA CATCGG CAAA CCGATG GCAACCCTGTTTGTG secD 357145 - 358992 + | preprotein translocase subunit SecD secF 359003 - 359974 + | preprotein translocase subunit SecF TERM 437 359999 - 360018 + F 100 -10 -5.92337 | opp_overlap 359999 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT TERM 438 360018 - 359999 - f 73 -7.8 -4.11216 | opp_overlap 359999 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT yajD 360103 - 360450 + | hypothetical protein TERM 439 360617 - 360597 - T 95 -12.6 -4.14257 | opp_overlap 360597 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA TERM 440 360597 - 360617 + T 95 -12.6 -4.30576 | opp_overlap 360597 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA tsx 361511 - 360627 - | outer membrane protein Tsx yajI 362348 - 361809 - | hypothetical protein TERM 441 362144 - 362187 + g 76 -7.4 -4.29396 | opp_overlap 362160, overlap 362142 362176 362177 CCGGTGTTTTCGCTC CAGGCAGAAGGTAAACCCCA CTGC TGGATTTTGCATTCAGCCTG TTTTGCTGAGTGATT TERM 442 362241 - 362256 + g 71 -9 -3.53018 | overlap 362225 362239 CGTCATCTCCTGGTT CAGCGT GCTG ACGCTG TGTTTCATCTGTCGC ybaD 362499 - 362948 + | transcriptional regulator NrdR ribD 362952 - 364055 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 443 364568 - 364552 - g 70 -6.5 -4.17132 | overlap 364553 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACCGCGCTTGAAAT ribH 364144 - 364614 + | riboflavin synthase subunit beta TERM 444 364768 - 364757 - g 70 -5.8 -4.23723 | opp_overlap 364745 364742, overlap 364747 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 445 364905 - 364880 - g 73 -3.9 -4.87665 | gap 1, overlap 364881 364883 GGCCAGGTAGAAAAA GCAGTACTGCGC ATT GCGCTGTAC-GA ACTGTCTAAACGTAG TERM 446 364903 - 364883 - g 76 -11.1 -3.32986 | overlap 364881 364880 CAGGTAGAAAAAGCA GTACTGCGC ATT GCGCTGTAC GAACTGTCTAAACGT nusB 364634 - 365053 + | transcription antitermination protein NusB TERM 447 365060 - 365100 + F 95 -7.7 -5.43553 | gap 2 AAAAAGTAATATCCA GGCCGGTAGATTCACGGAA GACTG TTCCATG-ATC-GCCGGCC TTTTCTTTTTTACCT TERM 448 365837 - 365850 + G 70 -4.5 -4.47328 | overlap 365838 GCGCACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT TERM 449 366049 - 366069 + G 73 -9 -3.64703 | GGGCTTTGTTTTATT CGTGACGG CGAAC CTGTCACG TTTGACTGGAAAGGA thiL 365131 - 366108 + | thiamine monophosphate kinase TERM 450 366205 - 366225 + G 100 -13.3 -4.04719 | CGTTCCTGGCTCGAT GGGATCGCT GGC GGCGATCCC TTTCTGGTATCTGAT pgpA 366086 - 366604 + | phosphatidylglycerophosphatase A SF0356 367632 - 366715 - | putative reductase TERM 451 367106 - 367116 + g 86 -6.8 -4.98255 | opp_overlap 367099, overlap 367099 CTGACAAACTGCGCC CAGC AGT GCTG TTTTTGTAGTTCCAG dxs 369549 - 367687 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 452 367860 - 367873 + g 78 -5.2 -4.78237 | CTCCGCTACCTGCGC CGCC CATAAT GGCG TTTTCTTCTACGGTG ispA 370473 - 369574 - | geranyltranstransferase xseB 370715 - 370473 - | exodeoxyribonuclease VII small subunit yajK 370921 - 372291 + | thiamine biosynthesis protein ThiI TERM 453 372384 - 372407 + T 100 -15.4 -3.55444 | AATTTGTAGTTTTTA CGTCGCATCT GGTC AGATGCGACG TTTGCCGCATCCGAC thiJ 373020 - 372424 - | hypothetical protein apbA 373888 - 372977 - | 2-dehydropantoate 2-reductase TERM 454 373982 - 373928 - H 88 -12.5 -3.61398 | gap 2, opp_overlap 373925 373979 373980, overlap 373929 373977 CCGGGTGTTCAATAA GGC-TATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATACGTC CTGGTGCAGGACTGT TERM 455 373979 - 373929 - H 84 -13.7 -2.76696 | opp_overlap 373925, overlap 373928 373977 CGGGTGTTCAATAAG GCTATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATA-C GTCCTGGTGCAGGAC TERM 456 373980 - 373994 + H 73 -10 -3.38135 | opp_overlap 373928 373977, overlap 373979 ACAATTAAGGGATAC GTCCTG GTG CAGGAC TGTTGGTTATTTAAC yajQ 374056 - 374547 + | nucleotide-binding protein TERM 457 374575 - 374592 + T 95 -12.7 -4.1196 | AGCTACTGATTGTCA GGGCCAC CGTG GTGGCCC TTTTGACCATGCATT SF0364 376337 - 374607 - | hypothetical protein TERM 458 374804 - 374814 + g 100 -5.4 -5.47218 | AGGTAATGTGTGCCA TGCA TTC TGCA TTTTTTTGCATACAA TERM 459 375043 - 375059 + g 76 -3.7 -4.99972 | AATAGTCCTCTCATT TCACTTT CAG AATGTGA TTTTTGCTCTTTTAT TERM 460 375704 - 375720 + g 82 -2.2 -5.37043 | opp_overlap 375717, overlap 375717 TATTCAGCGCCTTAT CGGCAT AATGA ATGGCG TTTTTTATATCGCCT TERM 461 375717 - 375734 + g 71 -2.6 -4.93877 | opp_overlap 375717, overlap 375704 ATCGGCATAATGAAT GGCGTT TTTTAT ATCGCC TTTTGTTTGATAACC SF0365 378543 - 376390 - | hypothetical protein TERM 462 377422 - 377439 + g 74 -9.9 -3.5594 | AACAGAAATTTGTTT TCCGTCT TTAT AGACGGA TTTAGACAGTAACTT insB 378888 - 379391 + | IS1 ORF2 SF0367 379678 - 379439 - | hypothetical protein SF0368 380283 - 379972 - | hypothetical protein TERM 463 380389 - 380413 + r 83 -13.7 -2.62396 | opp_overlap 380391 380393 380395, overlap 380391 380393 380395 TGCTCACTCTGTCAA GAGATACGGTT ATT AGCCGTATCTC TGATCTCAGACAATA TERM 464 380391 - 380411 + r 72 -10.5 -2.85351 | opp_overlap 380391 380393 380395, overlap 380389 380393 380395 CTCACTCTGTCAAGA GATACGGTT ATT AGCCGTATC TCTGATCTCAGACAA TERM 465 380452 - 380427 - R 90 -13.5 -3.50393 | opp_overlap 380433 380445, overlap 380433 TCTGATCTCAGACAA TAAAAAGGTGC CGTA GCACCTTTTTA ATAGAGAGGTTTTGT TERM 466 380433 - 380446 + r 84 -8.1 -4.72272 | opp_overlap 380427 380433, overlap 380445 CTCAGACAATAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG TERM 467 380446 - 380433 - R 100 -8.1 -5.24796 | opp_overlap 380433 380445, overlap 380427 CTCAGACAATAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG cyoE 381354 - 380467 - | protoheme IX farnesyltransferase TERM 468 381278 - 381258 - G 74 -9.7 -3.45386 | overlap 381246 ACAGGGGATAATCAA TGCTGCCCT TTG AGGCCAGCA GGAATCCCCCAATCA cyoD 381698 - 381369 - | cytochrome o ubiquinol oxidase subunit IV cyoC 382312 - 381698 - | cytochrome o ubiquinol oxidase subunit III TERM 469 382025 - 381995 - G 72 -7.5 -4.00042 | opp_overlap 382009 TCCGGCACCAAACAA CCAGGTCAACGCC AGCCA GGAGATAACCTGG CTTTTGTTGTTTTTG TERM 470 382009 - 382026 + g 100 -8.4 -5.18715 | opp_overlap 381995 ACCAGGTCAACGCCA GCCAGG AGATAA CCTGGC TTTTGTTGTTTTTGT TERM 471 382339 - 382366 + r 77 -9.2 -3.85698 | opp_overlap 382346, overlap 382347 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 472 382347 - 382358 + r 78 -5.8 -4.84529 | opp_overlap 382346, overlap 382339 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC SF0374 385651 - 384845 - | ISSfl4 ORF3 SF0375 386128 - 385781 - | ISSfl4 ORF2 SF0376 386799 - 386125 - | ISSfl4 ORF1 TERM 473 386463 - 386451 - G 73 -9.1 -3.62046 | CGATCCGGGCAACAA CAGCC CCA GGCTG TAACGCCTGCTTAGC TERM 474 386803 - 386830 + r 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG TERM 475 386968 - 386948 - R 76 -4.9 -4.90525 | opp_overlap 386951 CAATGCGAAATAAAA CAATTATTT AAC AAATAATTA TCATTAAAGTGACAA TERM 476 387112 - 387158 + r 77 -10.5 -3.38314 | overlap 387111 AAGCGATGCTGATGT TTATTTAGCCGTAATAATTAC GGCGA GTGATTACTACAGCTAAATAA TATTTACAGATTACG ampG 388644 - 387169 - | muropeptide transporter TERM 477 387796 - 387768 - G 72 -11 -3.1012 | overlap 387756 387766 387765 AAATGCCGAAAATCA GCAGCGCCCG GAACAGCGA CAGGCGCTGC ATCAAAATCCCACCG TERM 478 388305 - 388292 - G 75 -4.5 -4.81551 | GAGGCAGAGCAAAAA GCGAT CACC ACCGC CAGCGCCGCCATCCA TERM 479 388483 - 388467 - G 71 -2.9 -4.76892 | overlap 388468 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGAGAGAAGAAACCA yajG 389266 - 388688 - | hypothetical protein bolA 389571 - 389888 + | transcriptional regulator BolA TERM 480 389942 - 389965 + GF 93 -9.6 -4.59984 | opp_overlap 389935 389947, overlap 389947 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 481 389947 - 389960 + GF 100 -9.5 -5.23292 | opp_overlap 389947, overlap 389942 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 482 389960 - 389947 - gf 100 -9.5 -4.74132 | opp_overlap 389942 389947 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 483 390047 - 390032 - gf 90 -6.8 -5.055 | overlap 390034 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 484 390045 - 390034 - gf 72 -7.2 -4.15235 | overlap 390032 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG SF0380 389822 - 390085 + | hypothetical protein tig 390232 - 391530 + | trigger factor TERM 485 391565 - 391588 + F 100 -12.4 -5.9873 | opp_overlap 391564 391565 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA TERM 486 392101 - 392117 + G 70 -5 -4.44667 | ATCTGTATGGGCCAG GCGGCC TCGAT GGGCGC TTTCTTGTTGACCGC clpP 391777 - 392400 + | ATP-dependent Clp protease proteolytic subunit clpX 392526 - 393800 + | ATP-dependent protease ATP-binding subunit TERM 487 393829 - 393857 + F 80 -6.7 -4.88711 | opp_overlap 393834, overlap 393834 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 488 393834 - 393852 + F 91 -11 -4.3623 | opp_overlap 393834, overlap 393829 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 489 393852 - 393834 - f 93 -8.8 -4.88407 | opp_overlap 393834 393829 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 490 394934 - 394921 - g 77 -3.1 -5.10029 | gap 1, overlap 394911 394923 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 491 394939 - 394923 - g 82 -9.4 -4.17355 | overlap 394911 394921 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 492 395281 - 395270 - g 70 -4.4 -4.45485 | opp_overlap 395263 ATGAGATCGACAAAA TGTC TTCT GACA TGCGAGGCGATCCGG TERM 493 395983 - 395971 - g 75 -5.5 -4.72986 | GATTTTTACGAAAAA CGTGA CAT CCACG TCCACGTACCGGAAG lon 393988 - 396342 + | DNA-binding ATP-dependent protease La TERM 494 396407 - 396372 - f 79 -4.6 -5.14163 | opp_overlap 396375, overlap 396374 396375 ATGCACTAATAAAAA CAGGGCTGGCAGGC TAATTCGG GCTTGCCAGCCTTT TTTTGTCTCGCTAAG TERM 495 396405 - 396374 - f 74 -7.2 -4.19587 | opp_overlap 396375, overlap 396372 396375 GCACTAATAAAAACA GGGCTGGCAGGC TAATTCGG GCTTGCCAGCCT TTTTTTGTCTCGCTA TERM 496 396404 - 396375 - f 73 -10.7 -3.10668 | opp_overlap 396375, overlap 396374 396372 CACTAATAAAAACAG GGCTGGCAGGC TAATTCGG GCTTGCCAGCC TTTTTTTGTCTCGCT TERM 497 396375 - 396404 + F 100 -13.6 -5.72616 | opp_overlap 396375 396374 396372 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT hupB 396551 - 396823 + | transcriptional regulator HU subunit beta TERM 498 396859 - 396878 + F 100 -10 -5.7827 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT TERM 499 397753 - 397726 - g 73 -12 -2.5655 | overlap 397725 GTGAGTTACATCAAG CTGGTTGCCGCA ACGA TGCAGCAACCGG TTAGCGATGCGGATA TERM 500 398804 - 398773 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ybaU 397015 - 398886 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 501 398929 - 398956 + F 72 -10.6 -2.93447 | opp_overlap 398930 398935, overlap 398935 GTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 502 398955 - 398930 - f 86 -11.9 -3.63515 | opp_overlap 398929 398935, overlap 398935 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 503 398950 - 398935 - f 78 -6 -4.89477 | opp_overlap 398929 398935, overlap 398930 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 504 398935 - 398950 + F 81 -8.2 -4.39571 | opp_overlap 398935 398930, overlap 398929 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA ybaV 399037 - 399408 + | hypothetical protein TERM 505 399414 - 399427 + F 70 -2.4 -5.0133 | opp_overlap 399414 AACCCTGTAATTAAT TTGC ATAGTG GCAA TTTTTTGCCAGACTG TERM 506 399445 - 399467 + F 73 -10.7 -2.96274 | opp_overlap 399445, overlap 399440 399447 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC TERM 507 399467 - 399445 - f 74 -10.7 -3.12351 | opp_overlap 399445 399440 399447 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC ybaW 399502 - 399900 + | hypothetical protein ybaX 400647 - 399952 - | queuosine biosynthesis protein QueC TERM 508 400687 - 400673 - R 88 -8.6 -4.89477 | GCTTGAACAATAAAA GCGTTA TGG TAACGC CTGCGATTAACCCGG SF0390 402283 - 400712 - | putative transport protein TERM 509 401060 - 401078 + g 79 -2.2 -5.1925 | overlap 401061 401062 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 510 402927 - 402916 - g 95 -5.8 -5.44119 | overlap 402917 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 402492 - 403322 + | hypothetical protein TERM 511 403340 - 403355 + F 100 -11.8 -6.15259 | AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTTTGCGTTG TERM 512 403463 - 403449 - g 72 -4.3 -4.6008 | overlap 403461 AAAATAGAATTAAAA GAGAA AAAAA TTCTC CGTGGAAGGGCTATG TERM 513 403667 - 403654 - g 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG ybaO 403389 - 403934 + | putative LRP-like transcriptional regulator mdlA 403964 - 405736 + | putative multidrug transporter membrane\ATP-binding components mdlB 405729 - 407510 + | putative multidrug transporter membrane\ATP-binding components TERM 514 407547 - 407570 + F 89 -8.9 -4.68645 | opp_overlap 407547 407542 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC glnK 407691 - 408029 + | nitrogen regulatory protein P-II 2 TERM 515 408201 - 408214 + G 70 -5.9 -4.15453 | overlap 408212 TGTTTATGACTATTC CGGGG ATTG CCCTG TTTTACGGTGGGTTG amtB 408059 - 409345 + | ammonium transporter TERM 516 409362 - 409388 + T 100 -11.7 -5.68023 | gap 1, opp_overlap 409362 AAGCACTGCAAAAAA TAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 517 409388 - 409362 - T 100 -11.7 -5.07053 | gap 1, opp_overlap 409362 AAGCACTGCAAAAAA TAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA tesB 410254 - 409394 - | acyl-CoA thioesterase II TERM 518 410284 - 410274 - H 74 -6.8 -4.24342 | overlap 410275 CTCTCCAGTAACAAA GCTG CCG CAGC AAGCCAAAGTGAGTT ybaY 410472 - 411044 + | hypothetical protein TERM 519 411122 - 411147 + F 100 -9.8 -5.61596 | opp_overlap 411122 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 520 411147 - 411122 - f 72 -9.1 -3.61398 | opp_overlap 411122 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SF0399 411137 - 412483 + | IS4 orf TERM 521 412494 - 412465 - T 89 -9.3 -4.59109 | opp_overlap 412466, overlap 412467 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCCGCCCGGAGA TERM 522 412466 - 412493 + T 81 -12.8 -3.14132 | opp_overlap 412465 412467 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCGCCCGGAG TERM 523 412492 - 412467 - T 100 -16.3 -3.90762 | opp_overlap 412466, overlap 412465 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCGCCCGGA ybaZ 412824 - 412513 - | hypothetical protein TERM 524 412906 - 412896 - H 71 -6.8 -4.16016 | GCATTGCGCAAGAAA CCAG CAT CTGG CACGCAATGGGTTGC ybaA 413203 - 413556 + | hypothetical protein ylaB 415148 - 413598 - | hypothetical protein TERM 525 414016 - 414034 + g 80 -5.2 -5.02074 | TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA ylaC 415782 - 415312 - | hypothetical protein TERM 526 415423 - 415409 - G 77 -11.4 -3.13403 | opp_overlap 415400, overlap 415407 TGTTCCTTATGAACA TCCGCG ACA CGCGGA GAGTTCAAGATGGCT hha 416839 - 416621 - | hemolysin expression-modulating protein ybaJ 417239 - 416865 - | hypothetical protein TERM 527 417750 - 417765 + r 79 -11.8 -3.28537 | opp_overlap 417750 GTTATGCATAAAAAA GGCCGC TTAC GCGGCC TTAGTGATTACATGT TERM 528 417765 - 417750 - R 100 -11.8 -5.28176 | opp_overlap 417750 GTTATGCATAAAAAA GGCCGC TTAC GCGGCC TTAGTGATTACATGT acrB 420934 - 417785 - | acriflavine resistance protein TERM 529 419105 - 419126 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 530 420808 - 420847 + g 100 -15.8 -3.57144 | AGCGGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 422150 - 420957 - | acriflavin resistance protein AcrA precursor TERM 531 422121 - 422139 + g 93 -6 -5.17744 | opp_overlap 422117 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 422292 - 422939 + | DNA-binding transcriptional repressor AcrR TERM 532 423362 - 423349 - g 70 -3.7 -4.62783 | overlap 423332 CAGCTACGGCAAAAA GTCGC TGAA GCGCC GGAAAAAATGCGCCA TERM 533 423883 - 423869 - g 79 -4.2 -5.15969 | CTTTAACTGAAAAAA CGGC GCAGGAA GCCG TCTCCCCGGATGAAG aefA 423067 - 426429 + | potassium efflux protein KefA ybaM 426802 - 426641 - | hypothetical protein priC 427343 - 426816 - | primosomal replication protein N'' ybaN 427413 - 427790 + | hypothetical protein apt 427943 - 428494 + | adenine phosphoribosyltransferase TERM 534 428546 - 428570 + F 70 -9.9 -3.09492 | opp_overlap 428495, overlap 428546 428548 428564 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 535 428805 - 428777 - g 72 -5.2 -4.56597 | gap 1, opp_overlap 428746 GTGGCGTCGGAAAAA CCTCTATCGCCCG ACTG CTGGCGA-AGGGG CTAAACTGCGAAACC TERM 536 429859 - 429839 - g 74 -10.4 -3.53224 | overlap 429840 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 537 429940 - 429913 - g 76 -10.5 -3.36112 | gap 1 GCAAAAAAGAGTGAA CCGGCAGC-CGC TACCC GCGCGCGGCCGG TGAATAACGCTGCGC TERM 538 430097 - 430081 - g 75 -4.3 -4.7497 | overlap 430084 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTGAAAAA TERM 539 430094 - 430084 - g 77 -6.8 -4.4831 | overlap 430081 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTGAA TERM 540 430146 - 430133 - g 88 -5.2 -5.27779 | TGGAACATGAAAAAA CGCC GGAACT GGCG GTGAAGCTAGCGGCA TERM 541 430294 - 430252 - g 71 -9.1 -3.56594 | opp_overlap 430261 430267 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 542 430464 - 430447 - g 95 -6.9 -5.17744 | opp_overlap 430447 430444 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 428623 - 430548 + | DNA polymerase III subunits gamma and tau TERM 543 430550 - 430566 + F 77 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC TERM 544 430674 - 430662 - g 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA ybaB 430601 - 430930 + | hypothetical protein TERM 545 431010 - 430966 - g 72 -10.6 -3.07622 | gap 1, overlap 430956 430969 ACACAGCTTATGGAA GCACTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 546 431007 - 430969 - g 81 -13.1 -2.75382 | gap 1, overlap 430966 CAGCTTATGGAAGCA CTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 547 431350 - 431339 - g 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAATC recR 430930 - 431535 + | recombination protein RecR TERM 548 431535 - 431570 + F 72 -10.4 -2.90804 | opp_overlap 431526 431541, overlap 431534 431544 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG AGCA CCTGCTCTCGCTTGAA ATTATTCTCCCTTGT TERM 549 431564 - 431541 - f 100 -16.8 -3.90112 | opp_overlap 431535 431534 431544, overlap 431526 TCGTTTTTAAGCAAA CGAGAGCAGG AGCA CCTGCTCTCG CTTGAAATTATTCTC TERM 550 431544 - 431561 + F 73 -11.3 -2.55818 | opp_overlap 431541, overlap 431535 431534 TTTTTAAGCAAACGA GAGCAGG AGCA CCTGCTC TCGCTTGAAATTATT TERM 551 432106 - 432086 - g 100 -10.5 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAAC GGC GTCTTCTGG GAATCGGCTGGCGAA TERM 552 432771 - 432755 - g 81 -7.3 -4.60487 | overlap 432757 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 553 432769 - 432757 - g 72 -7.7 -3.91506 | overlap 432755 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 431645 - 433519 + | heat shock protein 90 TERM 554 433525 - 433552 + F 100 -15.7 -5.50723 | GGTTTCCTGATGTCA TGCCGGATGAC CTTTGT GTCATCCGGCA TTTTTCTTTTCATCA adk 433700 - 434344 + | adenylate kinase TERM 555 434355 - 434380 + F 82 -11.9 -3.31144 | overlap 434352 GCTAATCAAGCCGCA GCAGATCTGCT TTCG GGCAGGTCTGC TTATCCACCTCAGGC hemH 434476 - 435438 + | ferrochelatase ybaC 436394 - 435576 - | putative lipase TERM 556 437477 - 437456 - g 78 -7.9 -4.37198 | AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG CGCTATAGCGGAATT gsk 436546 - 437850 + | inosine-guanosine kinase TERM 557 437868 - 437899 + T 72 -8.6 -3.71873 | opp_overlap 437878 437879, overlap 437869 437878 437879 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTGGCTCTCGATGC TERM 558 437869 - 437898 + T 77 -12.1 -2.82803 | opp_overlap 437878 437879, overlap 437868 437878 437879 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTGGCTCTCGATG ybaL 439659 - 437983 - | putative cation:proton antiport protein TERM 559 439893 - 439861 - R 87 -10.6 -4.13945 | opp_overlap 439851, overlap 439864 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 560 439890 - 439864 - R 93 -15.3 -3.09831 | opp_overlap 439851, overlap 439861 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT fsr 441117 - 439897 - | fosmidomycin resistance protein TERM 561 440215 - 440203 - G 81 -10.5 -3.66424 | TAAAATCAGCGTAAA CGGCG CAA CGCCG AGGATAGAGCCCCAA TERM 562 440802 - 440783 - G 74 -7.8 -4.10007 | AGAACTGCGCCAAAA CTGCCCGC CAGC GCAAGCAG CACCAGACCACTTAA TERM 563 441083 - 441098 + g 72 -6.8 -4.23045 | gap 1, overlap 441082 441083 GTTGACGCAGCCGCG CCC-GCC ACA GGCTGGG TTTGTTCACTCATTG ushA 441335 - 442987 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 564 443018 - 442995 - T 100 -16.8 -3.67976 | opp_overlap 442988 442993 442991, overlap 442988 GGCAGTAATCCGAAA GTGCCGGATG TTTG CATCCGGCAC AATGCTTAATCGCGG ybaK 443503 - 443024 - | hypothetical protein TERM 565 443162 - 443173 + g 79 -2.2 -5.24129 | GGGGGCGTCGATAAT CGTT GGCA GACG TTTTTTCTGCCCCAG TERM 566 443680 - 443701 + r 90 -7.3 -5.40072 | overlap 443681 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 567 443681 - 443700 + r 83 -10.8 -3.83561 | overlap 443680 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA ybaP 444501 - 443707 - | putative ligase TERM 568 444303 - 444322 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG ybaQ 444585 - 444980 + | hypothetical protein TERM 569 445179 - 445158 - T 75 -10.1 -3.59979 | opp_overlap 445145, overlap 445172 TGCGTCGATGCCAAA TGCGCCGCC CTAA AGCAGCGCA TCCGCAATGACGTAC ybaR 447699 - 445195 - | copper exporting ATPase ybaS 447961 - 448893 + | glutaminase ybaT 448896 - 450188 + | putative amino acid/amine transport protein TERM 570 450356 - 450338 - g 73 -3.8 -4.7497 | GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCCATTCGCTTCTA ybbI 450313 - 450720 + | DNA-binding transcriptional regulator CueR ybbJ 451176 - 450721 - | hypothetical protein ybbK 452093 - 451176 - | putative protease TERM 571 451974 - 451997 + g 72 -9.7 -3.33969 | GAGCCCCGGCTGTAA CGTTTTGGT ATAGCG ACCAAAACG TTCTACCGTCCATTG TERM 572 452878 - 452845 - gH 72 -10.3 -2.76833 | overlap 452844 452847 AAAGACGAAATTAAT CATGCGGATAAAGTG ATTA CACTGCAACCGCATG CCGGAGAAATGCAGG ybbL 452239 - 452916 + | putative ABC transporter ATP-binding protein YbbL ybbM 452876 - 453682 + | putative metal resistance protein TERM 573 453711 - 453680 - T 95 -10.9 -4.4846 | opp_overlap 453685 453688, overlap 453681 CAATTGAAGAAGAAA TGATGCGATGCCG GATGCG CAGCATCGCATCC GGCGTTGTGGTTCAT TERM 574 453710 - 453681 - T 90 -14.4 -3.27992 | opp_overlap 453685 453688, overlap 453680 AATTGAAGAAGAAAT GATGCGATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA TERM 575 453685 - 453718 + T 100 -16.8 -2.81547 | opp_overlap 453681 453680, overlap 453688 GAAGAAGAAATGATG CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA TERM 576 453688 - 453715 + T 95 -14.9 -3.55487 | opp_overlap 453681 453680, overlap 453685 GAAGAAATGATGCGA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC ybbN 454635 - 453745 - | putative thioredoxin-like protein TERM 577 454034 - 454058 + g 70 -10.7 -2.83715 | TTCAGCAGTTCGATT TGCGCTACCAG CCC CTGGTAGCGGG TGTCCTGATCCTGCA ybbO 455469 - 454660 - | short chain dehydrogenase TERM 578 456018 - 455998 - H 77 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCG GCGG-CACG GAAGGTTAACAGGAC TERM 579 456299 - 456328 + G 75 -5.7 -4.72386 | gap 1, opp_overlap 456293 456292 ACGAAGAAGCGCGGG CAAAGTTG-CGCGC GAA GCACGTCGGCTTTG TTTTTCAGTCATTTA ybbA 456052 - 456738 + | putative ABC transporter ATP-binding protein YbbA TERM 580 457215 - 457225 + G 77 -8.2 -4.11484 | opp_overlap 457215 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAACCCCTTCCA ybbP 456735 - 459014 + | putative oxidoreductase TERM 581 459059 - 459073 + T 73 -11.4 -2.6999 | overlap 459055 459052 459057 GGATTGTTCTGCCGT GCAGCG GTG CGCTGC TGCTGTCGCTTTTCG TERM 582 459325 - 459349 + T 83 -12.9 -3.11999 | opp_overlap 459325 GTCGGTTTTTTTAAA GGCCGAAGG AGGTAAA CCTTCGGCC TTAGCTACGTTTCCT TERM 583 459349 - 459325 - T 90 -12.9 -3.53012 | opp_overlap 459325 GTCGGTTTTTTTAAA GGCCGAAGG AGGTAAA CCTTCGGCC TTAGCTACGTTTCCT TERM 584 459767 - 459802 + T 74 -10.7 -3.16203 | opp_overlap 459769 459777, overlap 459765 459769 459777 GTCTTGGGCGGAAAA AATAAAAAAACCGAC TGTCAT GTCGGTTTTTTTATA TCTGTATTCTGGTGC TERM 585 459769 - 459800 + T 83 -13.3 -3.13593 | opp_overlap 459769 459777, overlap 459767 459765 459777 CTTGGGCGGAAAAAA TAAAAAAACCGAC TGTCAT GTCGGTTTTTTTA TATCTGTATTCTGGT TERM 586 459800 - 459769 - T 100 -13.3 -5.00616 | opp_overlap 459769 459767 459765 459777, overlap 459777 CTTGGGCGGAAAAAA TAAAAAAACCGAC TGTCAT GTCGGTTTTTTTA TATCTGTATTCTGGT TERM 587 459777 - 459792 + T 93 -6.1 -5.77988 | opp_overlap 459769 459777, overlap 459769 459767 459765 GAAAAAATAAAAAAA CCGAC TGTCAT GTCGG TTTTTTTATATCTGT TERM 588 459792 - 459777 - T 100 -6.1 -6.28401 | opp_overlap 459777 459769 459767 459765, overlap 459769 GAAAAAATAAAAAAA CCGAC TGTCAT GTCGG TTTTTTTATATCTGT TERM 589 459812 - 459822 + T 78 -5.4 -4.77165 | TTTATATCTGTATTC TGGT GCA ACCA TTTTGTTCTCACGAC ybbB 460957 - 459863 - | tRNA 2-selenouridine synthase TERM 590 460337 - 460350 + g 72 -4.5 -4.70879 | opp_overlap 460336 CCACAGGCGCAAATC CTGAC GGGC GTCGG TTTTTAGCATTTCGG ybbS 461952 - 461026 - | DNA-binding transcriptional activator AllS TERM 591 461974 - 461989 + H 73 -4 -4.82819 | gap 1, opp_overlap 461974, overlap 461976 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG ybbT 462182 - 462664 + | ureidoglycolate hydrolase ybbU 462742 - 463557 + | DNA-binding transcriptional repressor AllR TERM 592 463570 - 463587 + F 100 -12.7 -5.40474 | TAGTGTCTGTCGCAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT TERM 593 463627 - 463609 - f 83 -10.4 -3.786 | TGACAAAATTTGAAA GTTGGAAA ATT TTTCCAAC TAATGGAGGTAGGAA gcl 463647 - 465428 + | glyoxylate carboligase insB 466128 - 465733 - | IS1 ORF2 insA 466430 - 466155 - | IS1 ORF1 ylbA 467130 - 466459 - | hypothetical protein TERM 594 466819 - 466845 + g 77 -10.2 -3.59087 | AAGATAGCCACCTTC GCTTAAGGCAAA TGT TTTGCCTTCGGC TTTGGCAGTGATATT ylbB 468298 - 467141 - | allantoate amidohydrolase TERM 595 468306 - 468291 - G 70 -6.1 -4.21141 | opp_overlap 468291 GGCGAATAAAGTAAA CGGGT CATCCC ACCCG TTGGGTCAGCGCCAA TERM 596 468770 - 468786 + G 81 -5 -5.1615 | ATGGCGCTTTAGATG CGCGCG CCGGT CGCCCG TTTTTTGCCTGTTCC ylbF 468436 - 469023 + | putative carboxylase TERM 597 469351 - 469367 + G 82 -7.9 -4.56597 | CGCGCATTGAGGTTT CGCCTGA TGA TCCGGCG TTTTTGCAGCCAGAG arcC 469020 - 469913 + | carbamate kinase purK 471117 - 470050 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 471623 - 471114 - | phosphoribosylaminoimidazole carboxylase catalytic subunit ybbF 472463 - 471741 - | UDP-2,3-diacylglucosamine hydrolase TERM 598 472236 - 472222 - G 74 -6.4 -4.46212 | TTGCCGAGCAGAAAA TCACGG TTG CCATGA ATGAAATAACAGGGA TERM 599 472428 - 472393 - G 100 -12.7 -5.00616 | gap 1, opp_overlap 472402 TCCCCCGCTAAAAAA CGCAGAA-AACCGGCG GTGAT CGCCGGTTCTTCCACG CAGAGATGAAGATCT TERM 600 472402 - 472418 + g 85 -11.5 -3.61398 | opp_overlap 472393 AAAAAACGCAGAAAA CCGGCGG TGA TCGCCGG TTCTTCCACGCAGAG ppiB 472960 - 472466 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 601 472717 - 472727 + g 72 -5.4 -4.58283 | GTGCCATTGCCAGCG TACC ACG GGTA TTTTTCAGGCCGTTG cysS 473134 - 474519 + | cysteinyl-tRNA synthetase TERM 602 474531 - 474554 + T 100 -16.8 -3.46602 | opp_overlap 474521 GTAATTGCGCAATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA ybcI 475064 - 474555 - | hypothetical protein TERM 603 474933 - 474917 - G 78 -5.1 -4.77036 | opp_overlap 474919 CGCGATGACCAAAAA CATTGCC GTA AGCAACG CCAAATTTAAACGAC TERM 604 475163 - 475142 - R 100 -15.9 -3.95836 | AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GAAAGGGATCAGGCA ybcJ 475384 - 475172 - | hypothetical protein folD 476252 - 475386 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 605 475417 - 475431 + g 72 -7.1 -4.18494 | opp_overlap 475415 475419 TCATGATATTCAACG CACGC CTGTA GCGTG TTTTCAATCAGCGTG TERM 606 475651 - 475668 + g 70 -4.1 -4.72272 | AACAGATCGGCATTT TCTACGT GATG ACGCAGA TTTTTAGTGAAGCGG TERM 607 476402 - 476412 + H 73 -4 -4.75372 | TGAGGTCGCTGAGAT TGAA AGC TTCA TTTTTCGTACATGAT TERM 608 476901 - 476913 + G 70 -6.3 -4.23723 | GTCACACTCGGTCAA TATCG TAC CGATA TTTTCAATGCTGTTG sfmA 476700 - 477275 + | putative fimbrial-like protein sfmC 477495 - 478187 + | putative chaperone SF0463 478218 - 478718 + | hypothetical protein insB 479124 - 478729 - | IS1 ORF2 insA 479426 - 479151 - | IS1 ORF1 SF0466 479753 - 479460 - | hypothetical protein TERM 609 479776 - 479799 + r 75 -9.6 -3.59262 | overlap 479780 CGGGTTTTCTTGATT CAGACGCGCA GCGG TGTGCGTTTG TTTGCCGCTATAGCG TERM 610 479780 - 479795 + r 77 -6.8 -4.43208 | overlap 479776 TTTTCTTGATTCAGA CGCGCA GCGG TGTGCG TTTGTTTGCCGCTAT TERM 611 479935 - 479905 - R 76 -11.8 -2.60079 | overlap 479915 TGACCGTATAATTCA CGCGATTACACCGC ATT GCGGTATCAACGCG CCCTTAGCTCAGTTG envY 480816 - 480055 - | envelope protein TERM 612 480990 - 480960 - R 86 -11.2 -3.727 | opp_overlap 480972, overlap 480962 CTGACGAGAGCGAAA GAGGTAAGCCAGGT CGT ACCCGACTTACCTG GAGGGGATTTAATAC TERM 613 480988 - 480962 - R 90 -13.8 -3.44487 | opp_overlap 480972, overlap 480960 GACGAGAGCGAAAGA GGTAAGCCAGGT CGT ACCCGACTTACC TGGAGGGGATTTAAT ybcH 481889 - 480999 - | hypothetical protein TERM 614 484408 - 484432 + r 78 -6.4 -4.72272 | gap 2, opp_overlap 484407 484411, overlap 484412 CTTCACTGCGACAAC GCAGGGTCGGCG CAG CGTCG-CCC-GC TTTTTGCTGGGCAAG TERM 615 484743 - 484728 - R 76 -4 -5.05116 | gap 1, opp_overlap 484741, overlap 484730 GGATAAATAACAAAA TG-GCGA TAA TCGCTCA GCCCCAGCTCTTCTG nfrB 487082 - 484845 - | bacteriophage N4 adsorption protein B TERM 616 485970 - 485954 - G 72 -5.1 -4.44797 | overlap 485946 CCAGCAACAGCAAAA GCTGG ATCATCA CCAGC ATCGCGAGGAAGCTG ybcZ 488674 - 487232 - | sensor kinase CusS ylcA 489347 - 488664 - | DNA-binding transcriptional activator CusR TERM 617 488878 - 488868 - G 82 -3.2 -5.24531 | overlap 488870 ATGGCGGAGAAAAAA CTCC AGC AGAG TAAATTCTTTACTGG TERM 618 489409 - 489430 + H 72 -6.7 -4.34402 | opp_overlap 489417, overlap 489408 ATGGCAATCGCTTAT TGGCAAAAT GACA ATTTTGTCA TTTTCCTGTCACCGG TERM 619 490397 - 490412 + G 81 -6.8 -4.65838 | overlap 490408 TAATGCTAATATTGG TGCTGC GCGT GCGGCA TTTTTCCCGTCTATC ylcB 489504 - 490886 + | copper/silver efflux system outer membrane protein CusC ylcC 490910 - 491242 + | periplasmic copper-binding protein SF0476 493214 - 492546 - | IS629 ORF2 TERM 620 493113 - 493125 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF0477 493755 - 493429 - | IS629 ORF1 SF0479 495687 - 494896 - | insertion sequence 2 OrfB protein SF0480 496169 - 495759 - | insertion sequence 2 OrfA protein TERM 621 496967 - 496979 + G 87 -4.8 -5.19212 | overlap 496957 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTTTGGTGCTGAT ybdE 496942 - 500085 + | putative inner membrane component for iron transport TERM 622 500417 - 500452 + G 84 -11.2 -3.71873 | gap 1, opp_overlap 500428 CAGCTTGGCGAGATG GTGGTCGAA-GAGCCGG TAT CCGGTTCATTTGCCCAC TTTGCCTATAAATAC pheP 500186 - 501562 + | phenylalanine transporter TERM 623 501594 - 501620 + T 100 -16.7 -5.65513 | opp_overlap 501592 501591 501589 CCGACAAAACGATGT CCGCTCTCATC CATTC GATGAGAGCGG TTTTTTTAATTACTG ybdG 502877 - 501630 - | putative transport protein TERM 624 502977 - 502956 - R 82 -11.5 -3.61103 | overlap 502958 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GAGAGAATTACACTT TERM 625 502975 - 502958 - R 90 -14.1 -3.38224 | overlap 502956 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGAGAGAATTACAC SF0484 504542 - 503334 - | iso-IS10R ORF ybdF 505438 - 505070 - | hypothetical protein ybdJ 505751 - 505503 - | hypothetical protein ybdK 506935 - 505817 - | carboxylate-amine ligase TERM 626 506507 - 506494 - G 82 -8.1 -4.49556 | CGTGCAGCAAATAAA TGGCG TCAT CGCCA CTGGCACAGCCAACA TERM 627 506721 - 506711 - G 70 -6.8 -4.09685 | opp_overlap 506714 CTGCATCGCTGAAAA CTGC CCG GCAG CCTGGTTGATATCAC TERM 628 507538 - 507522 - g 76 -3.7 -4.92363 | AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGCGTTAGTGC SF0489 507366 - 507848 + | IS150 ORF1(ORF A) SF0490 508663 - 507845 - | IS600 ORF2 SF0491 509496 - 508828 - | IS629 ORF2 TERM 629 509395 - 509407 + g 70 -4.8 -4.56597 | overlap 509385 GGCTTTCCGGCTGAT GGTC ATACG GACC TTTTTACCCCGGAGA SF0492 510037 - 509711 - | IS629 ORF1 SF0493 510310 - 510089 - | IS600 ORF1 TERM 630 511293 - 511261 - g 100 -13.6 -4.55128 | opp_overlap 511261 AGCCTGAAATTAAAA GGTCTGACTCCAAT TGAAT ATCGGAATCAGACC TATATGCCTCGTGTA SF0494 510460 - 511311 + | IS150 ORF2 TERM 631 511341 - 511381 + T 72 -9.2 -3.65046 | gap 1, overlap 511380 GGGGTCAGTAACCCT GGGGCTGCCACTCCAAA CCAGACAA TTTGGA-TGGTAGTCCC TTCTTCGCATGGAGG TERM 632 511560 - 511592 + T 77 -10.6 -3.32963 | gap 1, opp_overlap 511559, overlap 511560 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGGAT TERM 633 511560 - 511591 + T 71 -10.8 -2.59564 | opp_overlap 511559, overlap 511560 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GTAA TCCCCGCATATCCG GTTGTCAGGTCAGGA TERM 634 511631 - 511660 + T 100 -17.9 -4.19735 | ACCTGCTTTACACTT TCGCCCGCGGTCA GTGA TGGCTGCGGGCGA TTTCGTTTTAAGAGC TERM 635 512063 - 512095 + T 77 -10.6 -3.32963 | gap 1, opp_overlap 512062, overlap 512063 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGAGT TERM 636 512063 - 512094 + T 71 -10.8 -2.59564 | opp_overlap 512062, overlap 512063 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GTAA TCCCCGCATATCCG GTTGTCAGGTCAGAG entD 512813 - 512184 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 637 512527 - 512510 - G 73 -9.1 -3.59979 | TCGGTTGACGGGAAA CCACGGC CAAT GCCGTAG CCCCGCAGTGGCTAA TERM 638 512948 - 512919 - R 100 -17.9 -3.30124 | opp_overlap 512916 512913, overlap 512901 TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCGTGAACGAC GCGCACTTTGTCAAC fepA 515219 - 512979 - | outer membrane receptor FepA TERM 639 513342 - 513373 + g 77 -2.9 -5.11836 | gap 1, overlap 513345 TGAGTTCAACGTGTA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 640 515024 - 515037 + g 70 -3.7 -4.64657 | TGATCTCCGACACAT CGCGG GCAA CCGGG TTTTTGCGGATTTCA TERM 641 515727 - 515737 + G 72 -6.8 -4.15044 | ATGCCAACTGGCGCG GCAG CTA CTGC TTTATTCCCACCGAA TERM 642 515834 - 515816 - g 77 -8.2 -4.08692 | GAAGGCTGGCGAAAA CTATTACC CCA GGCAATAG CCGATCCGCTGAATC fes 515462 - 516664 + | enterobactin/ferric enterobactin esterase TERM 643 518311 - 518295 - g 95 -10.1 -4.64144 | overlap 518286 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGCAGATGCGCGT TERM 644 519159 - 519171 + G 70 -6.9 -4.07687 | CGGCGGTAGATGTCA GCTGG TAT CCGGC TTTTGGCGAGGAACT TERM 645 520109 - 520119 + G 78 -8.2 -4.18762 | CTGTTTTGTTTCCAT CCGG CGT CCGG TTTTGCCTGGCAGTT TERM 646 520297 - 520271 - g 81 -12.2 -3.16683 | overlap 520274 ACGCTACTTGAGCAA CAACCGCACGGC ATT GCGGCGCGGCTG CGTGCCCGTGGCGAA TERM 647 520294 - 520274 - g 79 -10.3 -3.7282 | overlap 520271 CTACTTGAGCAACAA CCGCACGGC ATT GCGGCGCGG CTGCGTGCCCGTGGC entF 516881 - 520726 + | enterobactin synthase subunit F insA 520810 - 521085 + | IS1 ORF1 insB 521112 - 521507 + | IS1 ORF2 TERM 648 521521 - 521547 + T 100 -8.2 -5.85425 | AAGTTGGAGTCATTA CCCATAATTA CAGAAAA TAATTATGGG TTTTTTATTTGTTTG fepC 523663 - 522848 - | iron-enterobactin transporter ATP-binding protein fepG 524652 - 523660 - | iron-enterobactin transporter permease TERM 649 524444 - 524418 - G 95 -10 -4.67353 | overlap 524419 TCAGCGACTGAAAAA TCGCGCCGCTGA CGC CCAGCGCCGCGC CAATCAACAGCGCCA TERM 650 524443 - 524419 - G 89 -13.5 -3.3993 | overlap 524418 CAGCGACTGAAAAAT CGCGCCGCTGA CGC CCAGCGCCGCG CCAATCAACAGCGCC fepD 525665 - 524649 - | iron-enterobactin transporter membrane protein ybdA 525764 - 526996 + | enterobactin exporter EntS fepB 527956 - 527000 - | iron-enterobactin transporter periplasmic binding protein TERM 651 530643 - 530658 + G 71 -3.2 -4.87626 | AGCACAATGCCAGTG CCTTTG ATGC CAACGG TTTTTACTGTTCCGG TERM 652 531028 - 531008 - g 70 -3.9 -4.72201 | overlap 531011 GTCGATAAAAAACAA TTACGTCAG TGG CTGGCGTCA CGCGCATCAGCCTGA entE 529433 - 531043 + | enterobactin synthase subunit E entB 531057 - 531914 + | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase entA 531914 - 532660 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 532663 - 533076 + | hypothetical protein TERM 653 534729 - 534741 + G 72 -6.9 -4.19177 | overlap 534728 GGTAGATGCGGGTAC GCGTG CTG CGCGC TTTATGTTGCAGGAT cstA 533257 - 535362 + | carbon starvation protein SF0513 535544 - 535741 + | hypothetical protein ybdH 536839 - 535751 - | hypothetical protein TERM 654 537611 - 537638 + G 72 -6.2 -4.39696 | opp_overlap 537587 AGTGTGCTGGCGCAT CCGCAGCTGC GTGAGCGG GCAGTGGCGG TTTCTTCATTTGGCA TERM 655 538075 - 538103 + G 72 -8.2 -3.81137 | gap 1 GAAGGAATCGACGTT GCTGGCAGCAG CTGAACGC CTGC-GCCAGC TTTAGCTATTTAACC ybdL 536948 - 538108 + | putative aminotransferase SF0516 539467 - 538628 - | IS911 ORF2 TERM 656 539036 - 539047 + g 77 -5.8 -4.63218 | opp_overlap 539032 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG SF0517 539832 - 539494 - | IS911 ORF1 SF0519 541040 - 541324 + | hypothetical protein SF0520 541381 - 542193 + | hypothetical protein TERM 657 542485 - 542501 + T 73 -4.5 -4.86621 | ATAAAGTAAACACTG TAAAGCA GAG TGTTTTA TTTTTCATTCGCGCT SF0522 543464 - 542562 - | lysR-family protein transcriptional regulator dsbG 544420 - 543674 - | disulfide isomerase/thiol-disulfide oxidase TERM 658 544867 - 544845 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 544792 - 545355 + | alkyl hydroperoxide reductase subunit C TERM 659 545493 - 545512 + F 100 -13.6 -4.63218 | AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 660 545644 - 545627 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 545570 - 547165 + | alkyl hydroperoxide reductase, F52a subunit TERM 661 547196 - 547219 + T 100 -13.1 -5.27923 | opp_overlap 547211, overlap 547210 ACCTGCAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATGGCATTA TERM 662 547265 - 547239 - T 100 -18 -4.7373 | opp_overlap 547210 547232 547231, overlap 547211 TTATGGCATTAAAAA GCCCTGCCGGGA TGT TCCAGGCAGGGC GGCATAAATACTTTT ybdQ 547714 - 547286 - | hypothetical protein ybdR 547935 - 549173 + | putative oxidoreductase TERM 663 549369 - 549350 - T 88 -12.2 -3.53811 | CTGATTTTGCGTAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 549814 - 549404 - | nucleoside diphosphate kinase regulator TERM 664 549894 - 549872 - R 100 -12.7 -5.11836 | opp_overlap 549872 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 665 549872 - 549894 + r 86 -11.2 -3.6608 | opp_overlap 549872 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT rna 550867 - 550043 - | ribonuclease I TERM 666 550827 - 550813 - G 77 -8.5 -4.13872 | overlap 550804 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGGCAGAATG TERM 667 550897 - 550938 + r 73 -7.9 -4.19371 | opp_overlap 550904, overlap 550900 CTATCTATTAAATCA TAAAAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 668 550900 - 550935 + r 70 -9.6 -3.10512 | opp_overlap 550904, overlap 550897 TCTATTAAATCATAA AAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGA TGATTTATTCAGCGT TERM 669 550931 - 550904 - R 100 -18.5 -5.42265 | opp_overlap 550900 550897 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA TERM 670 551943 - 551927 - R 78 -6.5 -4.64598 | opp_overlap 551933, overlap 551898 551928 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 671 551942 - 551928 - R 73 -10 -3.38036 | opp_overlap 551933, overlap 551898 551927 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG TERM 672 552587 - 552604 + r 78 -6.2 -4.63928 | ATAATCGAGATCGGT GGGGGT TCGAAT GCCCCC TTTTTGCAATAATGT TERM 673 553414 - 553429 + r 83 -10.4 -3.72576 | TGGGTTTTTCCACGC GCGCAG ACGG CTGCGC TTTGCTCGCACAACA citF 555415 - 553883 - | citrate lyase alpha chain citE 556334 - 555426 - | citrate lyase beta chain (acyl lyase subunit) citD 556627 - 556331 - | citrate lyase subunit gamma citC 557787 - 556642 - | citrate lyase synthetase (citrate (pro-3S)-lyase ligase TERM 674 557386 - 557375 - G 77 -7.2 -4.58395 | opp_overlap 557382, overlap 557377 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT TERM 675 557634 - 557648 + g 100 -2.7 -6.14618 | overlap 557635 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 676 557635 - 557647 + g 70 -6.2 -4.25111 | overlap 557634 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 677 557728 - 557775 + g 77 -2.9 -5.13343 | gap 1, overlap 557729 CCTGAAGGTGCATGT TGTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAACTGATAACC TTTTATTTTCACTTG insB 558669 - 558166 - | IS1 ORF2 SF0537 558744 - 559496 + | putative integrase encoded by prophage CP-933K; partial ybhA 559732 - 560550 + | phosphotransferase TERM 678 560538 - 560558 + T 71 -9.7 -3.2964 | CCAGTTCATTTATAG CCACCTGAT TTA ATCAGGCGG TTATCGACACACTTT modC 561609 - 560551 - | molybdate transporter ATP-binding protein modB 562301 - 561612 - | molybdate ABC transporter permease protein TERM 679 561914 - 561896 - G 79 -4.4 -4.97158 | overlap 561897 TGATAGTAAAGAAAA CGCGCCAG CGC CCGGCACC TAGTGTTCTTGCGGC modA 563074 - 562301 - | molybdate transporter periplasmic protein TERM 680 562449 - 562459 + g 72 -6.8 -4.17491 | GAATCTTCCGGGAAG GTGG CAA CCAC TTTTACCCCTTTGCT TERM 681 563231 - 563214 - R 100 -8.4 -5.35224 | TTGAGAAAAAGAAAA TGCCCG ACTAAG CGGGCA CTCAGGGAATCAATG SF0542 563390 - 563241 - | hypothetical protein TERM 682 564217 - 564201 - g 81 -10.9 -3.57462 | TACCCGACGGGCAAA CACTGTG CGC CACAGTG CCGGTAAATGAAGCG modE 563519 - 564307 + | DNA-binding transcriptional regulator ModE TERM 683 564814 - 564839 + G 86 -11.1 -3.90559 | opp_overlap 564806 GAAAAACCCTGCTGT GTCAGGCGCTG ATGT CGGAGCCTGAC TTGTTGATTCTTGAT modF 564375 - 565847 + | putative molybdenum transport ATP-binding protein ModF TERM 684 566620 - 566603 - g 70 -4.1 -4.60041 | gap 1, overlap 566604 566605 ACCGACCTGCAAAAA GC-CCAGC CGG ACTGGAGC ATTGCCCTGCTGCGC TERM 685 566870 - 566855 - g 77 -6.1 -4.65895 | GTGGCGATGGAAAAA CTGGC GAACAA GCCAG GCGTACACATCTACA galE 566108 - 567124 + | UDP-galactose-4-epimerase TERM 686 567347 - 567331 - g 81 -6.5 -4.8667 | overlap 567332 GACAGGCGATAAAAA CCCCGAT TAC ACCGGGA CTTACGTTTTCACTA galT 567134 - 568180 + | galactose-1-phosphate uridylyltransferase galK 568184 - 569332 + | galactokinase galM 569326 - 570366 + | aldose 1-epimerase TERM 687 570373 - 570389 + F 87 -10.1 -4.27467 | GCTGAGTAATGTTAA GCCCTCG TCA TGAGGGC TTTATCTTCATATTG TERM 688 570701 - 570686 - g 74 -6.1 -4.45664 | overlap 570687 GTAAGCGAAGCAAAA GCAGC AGGTAA GCTGC TGAAAGAGGAAGGTT gpmA 570569 - 571321 + | phosphoglyceromutase TERM 689 571368 - 571348 - T 79 -8.3 -4.3179 | opp_overlap 571348 TTAAAAAATGAGAAA GCCGACT GCAAGTG AGTCGGC TTTTTTGTTTGTCGT TERM 690 571348 - 571368 + T 100 -8.3 -5.73978 | opp_overlap 571348 TTAAAAAATGAGAAA GCCGACT GCAAGTG AGTCGGC TTTTTTGTTTGTCGT TERM 691 571403 - 571435 + T 79 -12.7 -2.87136 | opp_overlap 571402 571397, overlap 571412 571413 AACAATGGAGCACAT TGCCTGATGCGACGC TGC GCGTCTTATCAGGCC TGTGGTGATTCATCG TERM 692 571413 - 571425 + T 70 -9.1 -3.30771 | opp_overlap 571402 571397, overlap 571412 571403 CACATTGCCTGATGC GACGC TGC GCGTC TTATCAGGCCTGTGG aroG 572540 - 571488 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 693 572677 - 572665 - H 77 -3.3 -5.16071 | AATTAGCAAGAAAAA CGCCA GAT TGTCG CGAAAAACGAGATCT SF0551 572856 - 573236 + | putative homeobox protein TERM 694 573258 - 573277 + F 93 -9.3 -4.78661 | opp_overlap 573258 573257 AAAATAGCCAATAAT GGGAGAG CGGAGT CTCTCCC TTTTAATTTTTCACT TERM 695 573645 - 573656 + G 70 -4.4 -4.53034 | overlap 573633 ATGCCATCGCCCTCG TGGT AATT ACCA TTTTGATTGTCTGGG ybgR 573350 - 574291 + | zinc transporter ZitB TERM 696 574297 - 574327 + T 100 -15.5 -3.15544 | opp_overlap 574293 TCACCATTAATGGGA CAGCGCGCGTGAG CCTCT TTCACGTGCGCTG TTGATCCACATCCGG pnuC 575007 - 574288 - | PnuC protein nadA 576088 - 575045 - | quinolinate synthetase TERM 697 576303 - 576335 + r 100 -15.7 -3.19463 | opp_overlap 576304 576312, overlap 576304 576312 TGAGGATGCCTGAAT AGCAAAAAAGCGCCT TTA GGGCGCTTTTTTGCA TTGGTGGGTCGTGCA TERM 698 576304 - 576334 + r 100 -19.2 -2.51464 | opp_overlap 576304 576312, overlap 576303 576312 GAGGATGCCTGAATA GCAAAAAAGCGCCT TTA GGGCGCTTTTTTGC ATTGGTGGGTCGTGC TERM 699 576334 - 576304 - R 100 -18.5 -3.03441 | opp_overlap 576304 576303 576312, overlap 576312 GAGGATGCCTGAATA GCAAAAAAGCGCC TTTAG GGCGCTTTTTTGC ATTGGTGGGTCGTGC TERM 700 576312 - 576326 + r 100 -9.2 -5.17576 | opp_overlap 576304 576312, overlap 576304 576303 CTGAATAGCAAAAAA GCGCCT TTA GGGCGC TTTTTTGCATTGGTG TERM 701 576326 - 576312 - R 100 -8.5 -5.27779 | opp_overlap 576312 576304 576303, overlap 576304 CTGAATAGCAAAAAA GCGCC TTTAG GGCGC TTTTTTGCATTGGTG TERM 702 576572 - 576587 + r 72 -9 -3.52941 | CTCGCCCTTCGGCGC CGTTGC TGAT GCAACG TTATCCTTCACGTTT TERM 703 576824 - 576859 + r 70 -9.1 -3.4285 | opp_overlap 576828, overlap 576826 GCTTATGATTCGCAC GACACGACCAGAAAT AATGCG ACTTCTGGTCGTGTG TTATGCATTACATCG TERM 704 576826 - 576857 + r 79 -11.7 -3.28368 | opp_overlap 576828, overlap 576824 TTATGATTCGCACGA CACGACCAGAAAT AATGCG ACTTCTGGTCGTG TGTTATGCATTACAT TERM 705 576855 - 576828 - R 72 -10.7 -2.79302 | opp_overlap 576826 576824 ATGATTCGCACGACA CGACCAGAAAT AATGCG ACTTCTGGTCG TGTGTTATGCATTAC ybgF 577658 - 576867 - | hypothetical protein TERM 706 577406 - 577419 + g 70 -5.3 -4.29738 | GCTCCACGACCTGAT TCAGT TGAT ACTGA TTTTCCTGAATCTGA TERM 707 577604 - 577588 - G 100 -15.1 -4.25104 | GGTGCCTGAGCAAAA GCGGCCC AGT GGGCCGC TATACCAACCAGTAA pal 578189 - 577668 - | peptidoglycan-associated outer membrane lipoprotein tolB 579516 - 578224 - | translocation protein TolB tolA 580890 - 579649 - | cell envelope integrity inner membrane protein TolA TERM 708 580034 - 580062 + g 100 -13.1 -4.63527 | opp_overlap 580031, overlap 580032 580031 580040 580055 CCGAAAATATCATCT GCCTCTGCGGCAG CTT TTGCTGCAGCGGC TTTTTCAGCTGCTGC TERM 709 580040 - 580092 + g 100 -8.2 -5.36441 | opp_overlap 580031, overlap 580032 580031 580034 580055 580081 580085 ATATCATCTGCCTCT GCGGCAGCTTTTGCTGCAGCGGCT TTTTC AGCTGCTGCTTTTGCCGCTGCCGC TTTTTTGTCTGCGGC TERM 710 580055 - 580077 + g 91 -11.3 -4.11216 | overlap 580034 580040 GCGGCAGCTTTTGCT GCAGCGGCT TTTTC AGCTGCTGC TTTTGCCGCTGCCGC TERM 711 580085 - 580110 + g 85 -6.8 -4.84359 | overlap 580040 580081 580103 GCTGCTGCTTTTGCC GCTGCCGC TTTTTTGTCT GCGGCGGC TTTTTCTGCCGCTGC TERM 712 580103 - 580125 + g 90 -9.8 -4.32177 | overlap 580081 580085 580118 GCCGCTTTTTTGTCT GCGGCGGC TTTTTCT GCCGCTGC TTTCTTATCAGCTGC TERM 713 580136 - 580158 + g 83 -6.2 -4.95806 | overlap 580118 580134 580149 580151 GCTGCTTTCTTATCA GCTGCTGC CTTATCA GCAGCCGC TTTTTCTGCTGCTTT TERM 714 580151 - 580170 + g 87 -4.9 -5.26316 | overlap 580134 580136 580149 GCTGCTGCCTTATCA GCAGCCG CTTTTT CTGCTGC TTTTTTGTCGGCTGC TERM 715 580181 - 580203 + g 72 -6.2 -4.32177 | overlap 580179 580195 580196 GCTGCTTTTTTGTCG GCTGCAGC TTTCTCT GCTGCCGC TTTCTTATCAGCTGC TERM 716 580301 - 580326 + g 70 -4.5 -4.46854 | overlap 580299 580268 TTCTTTCTTGCTTCA GCTGCAGCTGC TTCT GCCGCTTCCGC TTTCTTCTTCAGTGC TERM 717 580343 - 580359 + g 84 -3.5 -5.27923 | TTCTTCTTCAGTGCC GCAGCGG CTA CCTCGGC TTTTTTCTGCGCTTC TERM 718 580520 - 580537 + g 74 -3.4 -4.93296 | gap 1, overlap 580522 AACTCGGCCTGTTTT GC-GGCT TCTTC AGCCTGC TTTTTCTGCTCCTGA tolR 581383 - 580955 - | colicin uptake protein TolR tolQ 582079 - 581387 - | colicin uptake protein TolQ ybgC 582480 - 582076 - | acyl-CoA thioester hydrolase YbgC TERM 719 582609 - 582584 - R 82 -7.6 -4.57341 | opp_overlap 582585, overlap 582585 AAGGGCGCGTAAAAA TTTATGGGCC TGGAGC GGCCCATAAT TTTTTAAAGAGAATT TERM 720 582585 - 582608 + r 100 -11.1 -5.00884 | opp_overlap 582584 582585 AGGGCGCGTAAAAAT TTATGGGCC TGGAGC GGCCCATAA TTTTTTAAAGAGAAT TERM 721 582608 - 582585 - R 79 -11.1 -3.33922 | opp_overlap 582585, overlap 582584 AGGGCGCGTAAAAAT TTATGGGCC TGGAGC GGCCCATAA TTTTTTAAAGAGAAT ybgE 582923 - 582630 - | hypothetical protein TERM 722 582888 - 582861 - G 81 -12.1 -3.21595 | gap 1, opp_overlap 582866, overlap 582848 582866 AAGCGCCATCACGAA GGA-AAGCGCCC GCAGG GGGCGCTTGTCC ATTACCGCATACAAG TERM 723 582882 - 582866 - G 86 -10.8 -3.97042 | opp_overlap 582866, overlap 582848 582861 CCATCACGAAGGAAA GCGCCC GCAGG GGGCGC TTGTCCATTACCGCA TERM 724 582866 - 582882 + g 76 -10.8 -3.41878 | opp_overlap 582848 582866 582861 CCATCACGAAGGAAA GCGCCC GCAGG GGGCGC TTGTCCATTACCGCA cydB 584190 - 583051 - | cytochrome d terminal oxidase polypeptide subunit II cydA 585777 - 584206 - | cytochrome d terminal oxidase, polypeptide subunit I TERM 725 586567 - 586540 - R 90 -10.6 -4.23213 | overlap 586541 586565 TGTAGACCGAATAAA GCGTTCATGCCG TATC CGGCATGAACAA AGCGCCCTTTGTCAA TERM 726 586566 - 586541 - R 86 -14.1 -3.13446 | overlap 586540 586565 GTAGACCGAATAAAG CGTTCATGCCG TATC CGGCATGAACA AAGCGCCCTTTGTCA ybgG 589256 - 586623 - | alpha-mannosidase TERM 727 586925 - 586939 + g 71 -2.8 -4.77567 | CTTTGTTGAGCTTCA TCGCAT CCC ATGGGA TTTTGTTGTAACACT TERM 728 588213 - 588252 + g 79 -3.7 -5.08169 | gap 2, opp_overlap 588212, overlap 588212 588215 GATTTCGCGATGAAC TT-TG-TCACGACAGCAGC AGCC GATGCTGTCGTGGGCATGA TTTTTTAAGATCTCT TERM 729 588215 - 588249 + g 72 -10.1 -3.38726 | gap 1, opp_overlap 588212, overlap 588212 588213 TTTCGCGATGAACTT TG-TCACGACAGCAGC AGCC GATGCTGTCGTGGGCA TGATTTTTTAAGATC hrsA 591250 - 589274 - | 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC TERM 730 590092 - 590107 + g 77 -8.2 -4.03234 | opp_overlap 590091 590090 GTCCAGCCGCAAAGC CTGGCG CTAA CGCCGG TTTATCTGCCAGCGA farR 591360 - 592082 + | DNA-binding transcriptional repressor MngR TERM 731 592109 - 592092 - T 100 -11.3 -5.01535 | CGATAAGCACAAAAA GGCCATC ATAC GATGGCC AACCATGTCGAAACC sucD 593054 - 592185 - | succinyl-CoA synthetase subunit alpha sucC 594220 - 593054 - | succinyl-CoA synthetase subunit beta TERM 732 593149 - 593162 + g 76 -9.5 -3.73068 | CAGCCAGTTTCTTCG CGCCG AGTT CGGCG TTGTTACCTTCCAGA TERM 733 593552 - 593575 + g 77 -10.2 -3.59979 | opp_overlap 593554 ATCAGGCTGGCGGAA CAGGGCGTTG CCAT CAGCGCCCAG TTTGCCGTCGAGGCA TERM 734 593795 - 593815 + g 73 -4 -4.81249 | gap 1 AACTTTATGGATCAG GT-GCGGAG TTTC TTCCGCCAC TTTTTCGATTTCCAC TERM 735 594293 - 594259 - R 79 -10.8 -3.55444 | TCGTTATCTTTTAAA CCGTAGACCGACAC CCTATCC ACGTCGGTCTACAG TGCAGGTGAAGCTTA sucB 595531 - 594314 - | dihydrolipoamide acetyltransferase TERM 736 594984 - 595000 + g 70 -3.6 -4.67353 | ACACGCTTACGCAGG CGAGTC ATCGG GACACG TTTTTCACTACGTGC kgd 598347 - 595546 - | alpha-ketoglutarate decarboxylase TERM 737 597732 - 597744 + g 100 -7.7 -5.48063 | CAGCGGCGGTCAGTT CGCTT AAG AAGCG TTTTTTCTCTTCGCT TERM 738 597788 - 597804 + g 83 -5.1 -5.11063 | CGACCAGACTCGATA CGCTG TTGGATC CAGCG TTTTTCTTCGGTGCT SF0572 598589 - 598329 - | hypothetical protein TERM 739 598457 - 598514 + g 72 -4.3 -4.67607 | gap 1, opp_overlap 598465 598466, overlap 598421 598458 598465 598466 CTACGTAGTGGCTCG CGAAGGAA-CCTTTAAAAACTGTCTTAG TGT CAGGGGCAGTTTTTAAAGATTTCCTGCA TTTCTTTGTTACGCC TERM 740 598466 - 598504 + g 71 -11.2 -2.89178 | opp_overlap 598465 598466, overlap 598465 598458 598457 GGCTCGCGAAGGAAC CTTTAAAAACTGTCTTAG TGT CAGGGGCAGTTTTTAAAG ATTTCCTGCATTTCT sdhB 599364 - 598648 - | succinate dehydrogenase iron-sulfur subunit sdhA 601146 - 599380 - | succinate dehydrogenase flavoprotein subunit TERM 741 600386 - 600433 + g 70 -11.2 -2.83299 | gap 1, overlap 600385 600422 CCACGGCAACCTTCG GTGACCAGTACGCCCGCACCGGC AAT GCCGGT-CGGGTGGAATTGCCAC ATTTCCATATCCTGC sdhD 601493 - 601146 - | succinate dehydrogenase cytochrome b556 small membrane subunit sdhC 601876 - 601487 - | succinate dehydrogenase cytochrome b556 large membrane subunit TERM 742 601777 - 601766 - G 70 -5.8 -4.1822 | GCCCACTGCAACAAA GGTG ATCA CACC GGAAACGCGATGGAG gltA 602585 - 603868 + | type II citrate synthase TERM 743 603895 - 603922 + F 100 -15 -4.99035 | opp_overlap 603894 603893 603891 TAAGTTGTAAATATT TTAACCCGCCGT TCAA ATGGCGGGTTAA TTTTTATATGCCTAA TERM 744 603973 - 603962 - f 73 -2.2 -5.27023 | ATTGTAAAAATAAAA TCCA CTAT CGGA CATTCATATATTCTA TERM 745 604022 - 604042 + F 71 -9.9 -3.21288 | opp_overlap 604022, overlap 604020 TAAATTATAAACAAA TAGATGATT TTT AATCATCTA TCTTCCTCTCAGTTA TERM 746 604042 - 604022 - f 93 -9.9 -4.65032 | opp_overlap 604022 604020 TAAATTATAAACAAA TAGATGATT TTT AATCATCTA TCTTCCTCTCAGTTA TERM 747 604207 - 604191 - f 73 -2.3 -5.24003 | overlap 604193 AAGAAAAACTAAAAA CATTCGA CAA TCAAATA AGATATTCTTGCACC ybgD 604259 - 604825 + | putative fimbrial-like protein TERM 748 604836 - 604853 + F 100 -14.1 -3.76781 | AATAAGTATTACTTT GGCGGCG CTAT CGCCGCC TTTCATAAAATATTT TERM 749 604976 - 604999 + G 77 -8.2 -4.07618 | opp_overlap 604978, overlap 604978 TGAATGTTCTCGATA AATCAATGCG CGAC CGCATTGATA TTTCATTATTAAAGG TERM 750 604997 - 604978 - g 86 -10.8 -3.86194 | opp_overlap 604976 604978 AATGTTCTCGATAAA TCAATGCG CGAC CGCATTGA TATTTCATTATTAAA TERM 751 604978 - 604997 + G 81 -10.8 -3.62957 | opp_overlap 604978, overlap 604976 AATGTTCTCGATAAA TCAATGCG CGAC CGCATTGA TATTTCATTATTAAA TERM 752 605033 - 605020 - g 76 -3.8 -5.01811 | opp_overlap 605028 TTATTAAAGGAAAAA GGAG TCATTG CTCC CGGTGAGTATTTTGT TERM 753 606203 - 606193 - g 70 -6.8 -4.0648 | AATTACAGCAAACAA GTGG ATG CCAC TAACAGCACGATTTC ybgQ 604876 - 607335 + | putative outer membrane protein TERM 754 607649 - 607661 + G 71 -3.3 -4.8667 | AAAATTACCGGGCGA TCGCG AAA CGCTA TTTTTCTACAATATG ybgP 607350 - 608081 + | putative chaperone TERM 755 609163 - 609190 + F 85 -12.8 -3.35522 | overlap 609161 TAACTGATTTGCCAT GATGCCCTTTGC AGCC GGAAAGGGCATC TCTTTCAGAAAATTG abrB 609261 - 610352 + | putative transport protein nei 611140 - 610349 - | endonuclease VIII ybgL 611910 - 611176 - | hypothetical protein TERM 756 611734 - 611717 - G 78 -8.5 -4.25104 | GCGCTGCGACCAAAA TTTTCCC TGTC GGGAAAA CTCGGGTGAGCGCCA ybgJ 613482 - 612826 - | putative carboxylase TERM 757 613250 - 613225 - G 72 -6.7 -4.20918 | opp_overlap 613225 CGGAATTTCAATAAA GCGAGACTCAG GTTC CAGGGCCTCGC TCTCCTCCCACCAGC ybgI 614248 - 613505 - | putative hydrolase-oxidase TERM 758 613707 - 613683 - G 70 -3.5 -4.71426 | gap 1, overlap 613687 613698 TCGCCAGTAATAAAA GCATCCACGC CAAAAC GCGCGG-CGC TATCGATAAAACTTT ybgH 614519 - 616000 + | putative transport protein TERM 759 616012 - 616053 + T 77 -10.2 -3.46936 | gap 1, overlap 616009 616047 ATAATAGGCCAGCAC CG-ATGCCTGATGCGACGC TTGAC GCGTCTTATCAGGCCTACG TATTTCCTGCAATTT phrB 617568 - 616150 - | deoxyribodipyrimidine photolyase TERM 760 616594 - 616604 + g 81 -8.2 -4.39571 | opp_overlap 616594 616593 AGCGGCATCAATAAT CGGG TAT CCCG TTTTGCCTTTCTGCC ybgA 618074 - 617565 - | hypothetical protein SF0591 618203 - 618490 + | hypothetical protein TERM 761 618528 - 618502 - T 100 -10.2 -5.32699 | opp_overlap 618502 TTAAATATTAAAAAA GCTGGGAAGATT TAA AACCTTCCTAGC TTTTTATTCTGTCTT TERM 762 618502 - 618528 + T 100 -10.2 -5.28561 | opp_overlap 618502 TTAAATATTAAAAAA GCTGGGAAGATT TAA AACCTTCCTAGC TTTTTATTCTGTCTT SF0592 618865 - 618545 - | hypothetical protein SF0593 619563 - 618928 - | putative Rhs-family protein SF0594 622315 - 619508 - | putative Rhs-family protein TERM 763 621940 - 621979 + gr 81 -9.8 -3.95022 | gap 1, overlap 621973 CCTGCGCCTCTATGT CCTGCCGCG-ATGCCGCAG TCG CCGCTGCCCGCGCGGCAGG TTTGCTGTTGATCCA insB 623326 - 622931 - | IS1 ORF2 insA 623628 - 623353 - | IS1 ORF1 TERM 764 624012 - 624041 + r 90 -13.7 -3.36273 | opp_overlap 624006 624003 624012, overlap 624004 624006 ATAATACGATGGAAA CGTCTTCCATGTT AATT ATCATGGAAGACG TTGATGTTGAACACC TERM 765 624041 - 624012 - R 100 -13.7 -3.72009 | opp_overlap 624004 624006 624012, overlap 624006 624003 ATAATACGATGGAAA CGTCTTCCATGTT AATT ATCATGGAAGACG TTGATGTTGAACACC TERM 766 624089 - 624055 - R 80 -12.2 -3.04144 | opp_overlap 624064, overlap 624061 CGTTGATGTTGAACA CCTAAACCAGCCCCCT GAT ACGAGGCTGGCTTAAG CGCGCAGGCAATCAG TERM 767 624083 - 624061 - R 79 -9.8 -3.76373 | opp_overlap 624064, overlap 624055 TGTTGAACACCTAAA CCAGCCCCCT GAT ACGAGGCTGG CTTAAGCGCGCAGGC ybfA 624307 - 624101 - | hypothetical protein TERM 768 624507 - 624518 + H 82 -5.8 -5.14894 | opp_overlap 624507 CCATCAGTTAAATCA TGGC CTTT GCCA TTTTTATACTTTTTT kdpA 624709 - 626382 + | potassium-transporting ATPase subunit A TERM 769 627111 - 627127 + T 73 -7.9 -4.11216 | overlap 627106 TCTTTTTACTGGCAA CCGCCAC GCT GTGGCCG TTTTCCGCGTGGGGC TERM 770 627415 - 627399 - T 73 -2.2 -5.14563 | gap 1, overlap 627400 GCGTGGATGAAAAAA CGCTGGC TGAC GCC-GCA CAACTGGCTTCGCTG TERM 771 628154 - 628171 + T 75 -9.9 -3.61517 | opp_overlap 628152 GCATTGCCAACGATG TGGCGAA ATAC TTCGCCA TTATTCCGGCGGCGT TERM 772 629377 - 629356 - T 81 -12.3 -3.22091 | opp_overlap 629355 629356 ATCTTAATGGACGAA CTGGCGCAC AGTA ATGCGCCAG GTTCTCGTCATCCTA TERM 773 629356 - 629377 + T 76 -11.6 -2.66692 | opp_overlap 629356, overlap 629355 ATCTTAATGGACGAA CTGGCGCA CAGTAA TGCGCCAG GTTCTCGTCATCCTA TERM 774 629501 - 629531 + T 70 -2.5 -5.08824 | gap 1, opp_overlap 629508, overlap 629505 TCAGCGGCGTCACCG GAATTCAGGTACGG GAAA CCGTGCCCG-ATCC TTTTTTCGATGCCGC TERM 775 629505 - 629528 + T 70 -8.8 -3.39842 | opp_overlap 629508, overlap 629501 CGGCGTCACCGGAAT TCAGGTACGG GAAA CCGTGCCCGA TCCTTTTTTCGATGC TERM 776 630364 - 630378 + T 74 -11.4 -2.82519 | overlap 630362 ATGGACGCTGGCCTT CGGTGG TTG CCACCG TCATTAATGTGGTGA SF0602 632544 - 632410 - | hypothetical protein TERM 777 633781 - 633795 + H 73 -7.8 -4.03234 | opp_overlap 633758 GAGCGTTGCTACAGG CTGGTG CAA CACCGG TTTATCTGGAAACGG potE 635272 - 636591 + | putrescine transporter TERM 778 636609 - 636628 + T 100 -5.6 -5.8187 | opp_overlap 636609 636611 AAGCAAAGTAAAAAA GGGCGATC TTGC GACCGCTC TTTTTTTATTAAATG TERM 779 636628 - 636609 - T 85 -5.6 -5.41359 | opp_overlap 636609, overlap 636611 AAGCAAAGTAAAAAA GGGCGATC TTGC GACCGCTC TTTTTTTATTAAATG pgm 638287 - 636647 - | phosphoglucomutase TERM 780 638252 - 638273 + g 78 -10.9 -3.42621 | opp_overlap 638247 AATCAAATCACTCTG TTGTGCAGG TTGG CCTGCACGA TTGTGGATTGCCATT seqA 638858 - 638313 - | replication initiation regulator SeqA TERM 781 638654 - 638636 - G 81 -11 -3.60151 | opp_overlap 638635 638636 CGTCCGAAAGCAGAA GTTCACGC ATT GCGCGAAC CTTGTCTTTAATCGT ybfF 639044 - 639808 + | hypothetical protein ybfE 639879 - 640241 + | LexA regulated protein fldA 640381 - 640911 + | flavodoxin FldA TERM 782 640917 - 640944 + F 100 -16.4 -3.19463 | overlap 640919 TAATGCCTGATGTGA TGCGGCGTAGAC TCAT GTCTACGCCGTA TTAATAGATAATGCC TERM 783 640919 - 640942 + F 100 -16.8 -3.15996 | overlap 640917 ATGCCTGATGTGATG CGGCGTAGAC TCAT GTCTACGCCG TATTAATAGATAATG fur 641200 - 641646 + | ferric uptake regulator TERM 784 641688 - 641661 - T 73 -11.4 -2.72463 | opp_overlap 641666, overlap 641666 AGCCAGCCTGAACGA GAAAAGCCAACC TGCG GGTTGGCTTTTT TATACAAGGGAAATA TERM 785 641683 - 641666 - T 95 -11.3 -4.5442 | opp_overlap 641666, overlap 641661 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG TERM 786 641666 - 641683 + T 100 -11.3 -5.24129 | opp_overlap 641666 641661 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG TERM 787 641729 - 641710 - T 80 -5.7 -5.011 | opp_overlap 641707 641710 641712 AGGGAAATAAGAAAA GCGAGAG TTACAG CTCTCAC TTATTTGTTATTACT ybfN 642056 - 641730 - | hypothetical protein ybfM 643499 - 642093 - | hypothetical protein TERM 788 642386 - 642399 + g 81 -6.7 -4.63527 | CGCCGATGGCGAAGC CTGGA AGAT TCCAG TTTTTCAGGTCATAC TERM 789 642648 - 642668 + g 74 -8.3 -3.86897 | opp_overlap 642644 642647 GCCGTCATAAAGATC GTTGACGCT GCG ATCGTCAAC TTTATCGCGGGTACC TERM 790 643861 - 643877 + r 83 -10.8 -3.74238 | opp_overlap 643861 GAAAAGCAGAAAAAA CGCCGC AGAGC GCGGCG TTTGGGATTGTTTGC TERM 791 643877 - 643861 - R 100 -11.5 -5.4588 | opp_overlap 643861 GAAAAGCAGAAAAAA CGCCGCA GAG CGCGGCG TTTGGGATTGTTTGC glnS 645742 - 644078 - | glutaminyl-tRNA synthetase TERM 792 644714 - 644726 + g 86 -9.1 -4.42639 | opp_overlap 644707 644708, overlap 644708 ATCGATAACCGCCAT TGCGC GCG GCGCA TTTTCGTTGAGATCT TERM 793 645803 - 645816 + r 75 -3.1 -5.10029 | TATAAGCGGGACAGG CTGAC AACT GTTAG TTTTTTAAAATTGAT TERM 794 645894 - 645872 - R 100 -12 -6.15828 | opp_overlap 645872 TTGATGAAAAAAAAA GCGGCAGAGA AGA TCTCCACCGC TTGTCATTGTTGGAT nagE 647891 - 645945 - | N-acetyl glucosamine specific PTS system components IIABC TERM 795 647836 - 647814 - G 74 -11.2 -3.1886 | overlap 647805 ACCGAATCGCAGCAA CAGCGCCGCC ACC GGCAGCACCG CGATAGGGAGCTGTA TERM 796 648037 - 648015 - H 76 -8.6 -4.09243 | CAGAGTGTGTGAAAA TTTAATTCGC ATC GCAAATTAAA CGCGTGTCTTTTGTG TERM 797 648610 - 648597 - g 100 -6.7 -5.52023 | AGTATGAAGAAAAAA TCCGT TCTT ACGGA AAAATTCATCTGTTT nagB 648224 - 649024 + | glucosamine-6-phosphate deaminase TERM 798 649709 - 649696 - g 72 -4.5 -4.62203 | gap 1 TTGAAAGAAGCAAAA GC-CGG TTT CCGCGC GGGGATTACCTTTGC TERM 799 649879 - 649867 - g 73 -9.1 -3.66356 | ATTCGTAACGCTAAA CGCCT TAA AGGCG ACAAACTGTGTCTGG TERM 800 649929 - 649939 + G 70 -4 -4.59773 | AGCAGGTGCCAACAT TGAA CAG TTCA TTTTTGCGGGTAAAA nagA 649084 - 650232 + | N-acetylglucosamine-6-phosphate deacetylase nagC 650241 - 651461 + | transcriptional repressor of nag (N-acetylglucosamine) operon TERM 801 652290 - 652265 - f 82 -13.3 -3.06162 | opp_overlap 652269 GACGTTATCTGAATA CCACCCACGTC TGCG GACGTGGTTGG CTCTGATGACAAACG TERM 802 652269 - 652286 + F 77 -11.3 -3.14468 | opp_overlap 652265 TTATCTGAATACCAC CCACGTC TGCG GACGTGG TTGGCTCTGATGACA TERM 803 652587 - 652601 + F 95 -7.8 -5.40072 | overlap 652579 652579 ATAGCTTGCGCACAG TGCTGC TTT GCGGCA TTTTTTTAAACAAGC TERM 804 653841 - 653831 - g 71 -3.2 -4.87318 | overlap 653833 GGCAAAATGGAAAAA CACA TCC TGCG TGAATGTTTTGAGTC asnB 652658 - 654205 + | asparagine synthetase B TERM 805 654217 - 654240 + T 100 -13.8 -4.56133 | opp_overlap 654212, overlap 654219 GTAAGAAATGCGGTA CTGCCCCGGA GAAA TCCGGGGCTG TTTTAGTTATTGCGC TERM 806 654219 - 654238 + T 100 -15 -3.88577 | opp_overlap 654212, overlap 654217 AAGAAATGCGGTACT GCCCCGGA GAAA TCCGGGGC TGTTTTAGTTATTGC TERM 807 655294 - 655321 + T 77 -11.4 -3.28209 | opp_overlap 655300, overlap 655300 TACCCCAGCCACATT AAAAAAGCTCGC TTCG GCGAGCTTTTTG CTTTTCTGCGTTCAT TERM 808 655315 - 655300 - T 100 -10.4 -5.22312 | opp_overlap 655294 655300 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGC TERM 809 655300 - 655315 + T 100 -10.4 -5.1417 | opp_overlap 655300, overlap 655294 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGC ubiF 656618 - 655443 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 810 657113 - 657136 + G 72 -10.2 -3.39505 | gap 1, opp_overlap 657111 657112 CGGAGATGATCAACT CCGTGC-GCGG CGA CCGCAGCCCGG TTGTAGATATCAGCT TERM 811 658134 - 658121 - g 72 -8.1 -3.89346 | TGCGCATGGCAGAAA CACCG GAGT CGGTG ATTGCCCGCACCCGC yleA 656764 - 658188 + | hypothetical protein TERM 812 658193 - 658218 + F 100 -9.7 -5.51046 | gap 1, overlap 658195 ATCAGCCGTAATTCT CA-GGCCTGCCG TTC CGGTGGGCCTTG TTTTTTCTCTCTTTA TERM 813 658195 - 658215 + F 100 -12.5 -4.78477 | overlap 658193 CAGCCGTAATTCTCA GGCCTGCCG TTC CGGTGGGCC TTGTTTTTTCTCTCT TERM 814 658702 - 658683 - g 82 -9.2 -4.26292 | overlap 658698 AATATCAAAACTAAA CGCGGCGT AATT AAGCCGCG CACGCCAAACCAGGC ybeZ 658302 - 659381 + | putative ATP-binding protein in pho regulon TERM 815 659437 - 659422 - g 73 -9 -3.67611 | GGCATGTGAAGATAA TTCCGG GTTA CCGGAA GAGAGCCAGTTTCAA ybeY 659378 - 659845 + | putative metalloprotease TERM 816 659876 - 659899 + F 86 -8.8 -4.43477 | overlap 659870 659875 ACTGGCAGACGTCCC CGCCGTTGGT GATT AACGACGGCG TTTTGATTAACTAAC ybeX 659935 - 660813 + | putative transport protein TERM 817 660862 - 660888 + G 81 -10.2 -3.97307 | gap 1, opp_overlap 660862 GCCTCATTAATTGAA CGCCAGC-GCA TTCGCC TGCTGCTGGCG TTATTATTCGGTGCC TERM 818 660888 - 660862 - g 70 -10.2 -3.20723 | gap 1, opp_overlap 660862 GCCTCATTAATTGAA CGCCAGC-GCA TTCGCC TGCTGCTGGCG TTATTATTCGGTGCC TERM 819 661501 - 661474 - g 72 -10.6 -3.12351 | opp_overlap 661470 661470 CTGCGTTACATCCAA TGGTTTACCCCG CAAC CGGAGAAAACCA TTCAGGTTTCGATGG lnt 660838 - 662376 + | apolipoprotein N-acyltransferase TERM 820 663223 - 663195 - g 81 -7.3 -4.72272 | overlap 663214 CCTGTTGACCAAAAA GGGCGGCGATATC AAA GATTTTGCCGACC TGAAAGGCAAAGCCG TERM 821 663438 - 663427 - g 70 -5.8 -4.29326 | GCGAAAGCGAAGAAA CCAG ACAA CTGG GATATCGTCGGCAAG ybeJ 662773 - 663681 + | glutamate and aspartate transporter subunit TERM 822 663804 - 663831 + F 100 -16.4 -5.26316 | TGGGTAACAATCTTC GAGGGTAGCAGT TAAC GCTGCTACCCTC TTTTTTCTGGAGTAG TERM 823 664160 - 664177 + G 71 -2 -5.01811 | TGGTTTAAGGCCGAG CTGGAT CCCAAT ATTCAG TTTTTCCTTTCATCC gltJ 663851 - 664591 + | glutamate/aspartate transport system permease gltK 664591 - 665265 + | glutamate/aspartate transport system permease gltL 665265 - 665990 + | ATP-binding protein of glutamate/aspartate transport system rihA 666108 - 667043 + | ribonucleoside hydrolase 1 TERM 824 667053 - 667094 + T 75 -6.7 -4.40232 | gap 1, overlap 667055 GCTTAACACTCGTCA TTGATTAAGATCACCACGCG TTA CCTG-GGTGGTCTTAATCTA TTTATCTCTTTTTCT TERM 825 667055 - 667092 + T 76 -9.3 -3.77089 | gap 1, overlap 667053 TTAACACTCGTCATT GATTAAGATCACCACGCG TTA CCTG-GGTGGTCTTAATC TATTTATCTCTTTTT TERM 826 668843 - 668798 - T 79 -11 -3.3514 | overlap 668799 668801 668823 ATTGAGACCTCATAA TCACGGCTGCCGGATGCGGC GTAAAT GCTGCATCCGGCATCGGCGC AAAAAACACATCGTC TERM 827 668842 - 668799 - T 86 -14.5 -2.60763 | overlap 668798 668801 668823 TTGAGACCTCATAAT CACGGCTGCCGGATGCGGC GTAAAT GCTGCATCCGGCATCGGCG CAAAAAACACATCGT TERM 828 668840 - 668801 - T 82 -13.5 -2.84298 | overlap 668799 668798 668823 GAGACCTCATAATCA CGGCTGCCGGATGCGGC GTAAAT GCTGCATCCGGCATCGG CGCAAAAAACACATC ybeV 670308 - 668857 - | hypothetical protein ybeU 671012 - 670305 - | putative tRNA ligase TERM 829 670455 - 670473 + g 77 -10.2 -3.66784 | TTTGTACAGGGTTAG CGCCTCGC GTA GCGAAGCG TTGTCTTCGCACTGA TERM 830 671653 - 671632 - g 74 -2.9 -4.9934 | overlap 671634 ACAACATTACAAAAA TGCGGAAAG ATTA CTTGCCGGA CTTCCCGCACATTAA ybeT 671114 - 671668 + | hypothetical protein ybeS 673105 - 671678 - | putative enzyme ybeR 673809 - 673102 - | hypothetical protein TERM 831 674052 - 674068 + G 73 -3.7 -4.81212 | AAGGCGATTGCGAGG CTCAATA TAT TGTTGGG TTTTATTATAATCGC TERM 832 674352 - 674327 - g 85 -9.7 -4.1523 | opp_overlap 674348, overlap 674348 CCCAACTATAAAGAA GCGGTTACCTG GTAT CAGATAGCCGC GGAGAGCGGAATGTC TERM 833 674867 - 674849 - g 76 -11 -3.30039 | opp_overlap 674864, overlap 674847 TACGGAGAAGGAAGA CCTGTCGA TCT CCGACAGG CTCTCGACCTGTATC ybeQ 673967 - 674950 + | hypothetical protein ybeL 675502 - 675020 - | hypothetical protein TERM 834 676082 - 676066 - g 78 -5.1 -4.8048 | opp_overlap 676069 CGCGTATATGAAAAA CCAGC TCAAAAT GCTGG GCTTTGGTTATGACT leuS 675737 - 678319 + | leucyl-tRNA synthetase TERM 835 678399 - 678418 + G 72 -10 -3.36785 | overlap 678400 CGGGTGTGGCTGGCA TCTGCGTG ACAC CACGCAGG TTCCTTCCACTATGA TERM 836 678400 - 678417 + G 73 -11.3 -2.6175 | overlap 678399 GGGTGTGGCTGGCAT CTGCGTG ACAC CACGCAG GTTCCTTCCACTATG TERM 837 678565 - 678533 - g 70 -4.7 -4.55295 | opp_overlap 678538 TGCTTGATAAAGAAA CCACGCGTAAGGACG TTC CATCCCTGCGTTTGG GTAAAGTGAGCATCG rlpB 678334 - 678915 + | LPS-assembly lipoprotein RplB TERM 838 678936 - 678978 + G 100 -12 -4.45544 | gap 1, opp_overlap 678939, overlap 678937 678939 CGGTTGTACCCGGAA CA-ACTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCGTATC TTTTACTTGGTAACG TERM 839 678937 - 678976 + G 100 -17.1 -3.83437 | opp_overlap 678939, overlap 678936 678939 GGTTGTACCCGGAAC AACTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCGTA TCTTTTACTTGGTAA TERM 840 678939 - 678974 + G 100 -19.7 -3.49321 | opp_overlap 678939, overlap 678937 678936 TTGTACCCGGAACAA CTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCG TATCTTTTACTTGGT TERM 841 678974 - 678939 - g 100 -17.5 -3.63515 | opp_overlap 678939 678937 678936 TTGTACCCGGAACAA CTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCG TATCTTTTACTTGGT holA 678915 - 679946 + | DNA polymerase III subunit delta TERM 842 680246 - 680256 + G 70 -4.6 -4.48713 | overlap 680239 AACAAGGACCGGACG TGCC GCT GGCG TTTATTATTGGTCAG nadD 679948 - 680589 + | nicotinic acid mononucleotide adenylyltransferase phpB 680613 - 681224 + | alpha-ribazole phosphatase ybeB 681592 - 681801 + | hypothetical protein ybeA 681805 - 682272 + | SPOUT methyltransferase superfamily protein TERM 843 682362 - 682374 + G 77 -6.2 -4.66264 | overlap 682356 GCTGTTTGTGCGCCG GGCG CTGGT CGCC TTTTTGGGGATTTTG TERM 844 683639 - 683626 - g 74 -2.3 -5.03747 | opp_overlap 683614, overlap 683614 683628 AAACGCTTTAAAAAA CCGTG GTAT CAGGG TGACACCATTCCGGT mrdA 682303 - 684204 + | penicillin-binding protein 2 TERM 845 684266 - 684232 - g 100 -6.5 -5.80364 | ATCCGAATAAAAAAA CATTCTGGGATAAAG TCCAT CTCGATCCCACAATG CTGCTGATTTTACTG mrdB 684207 - 685319 + | cell wall shape-determining protein rlpA 685330 - 686418 + | rare lipoprotein A TERM 846 686874 - 686889 + G 77 -10.4 -3.64049 | CAACGACGCATGGGC CACCGG TAAC CCGGTG TTTAAAGGTTCTTCG dacA 686557 - 687768 + | D-alanyl-D-alanine carboxypeptidase fraction A TERM 847 687823 - 687850 + F 75 -9.8 -3.56675 | opp_overlap 687827, overlap 687821 687827 CTAAGCATCAGTAAA AAAACTCCCGCC TTCT GGCGGGAGTTGC TATTTAATTACGTTA TERM 848 687846 - 687827 - f 100 -15 -5.55664 | opp_overlap 687823 687821 687827 GCATCAGTAAAAAAA CTCCCGCC TTCT GGCGGGAG TTGCTATTTAATTAC TERM 849 687827 - 687846 + F 100 -15 -3.50456 | opp_overlap 687827, overlap 687823 687821 GCATCAGTAAAAAAA CTCCCGCC TTCT GGCGGGAG TTGCTATTTAATTAC ybeD 687879 - 688142 + | hypothetical protein lipB 688243 - 688884 + | lipoyltransferase ybeF 689296 - 690096 + | putative DNA-binding transcriptional regulator TERM 850 690415 - 690382 - g 74 -6 -4.57073 | gap 1, overlap 690384 TATCCCGGTTAAAAA CGTG-GCAACAGAGC GCGAA GCCCTGCTGCGCAAG CCGGAATGGATGAAA lipA 690305 - 691270 + | lipoyl synthase TERM 851 691307 - 691324 + T 100 -11.3 -5.36441 | opp_overlap 691307 CTGTCTGATAAAAAA CCCGCTT TTTG AAGCGGG TTTTTTGTATCGAAC TERM 852 691324 - 691307 - T 100 -11.3 -5.24129 | opp_overlap 691307 CTGTCTGATAAAAAA CCCGCTT TTTG AAGCGGG TTTTTTGTATCGAAC tatE 691574 - 691371 - | twin arginine translocase protein E ybeM 692266 - 691703 - | putative amidase TERM 853 691850 - 691868 + g 77 -3 -5.06414 | opp_overlap 691842 691852, overlap 691852 GCCAAAGGGATCTAT AATCCGGC TTT GCCCGATA TTTTTGTTCCCGCAC ccrB 692584 - 692967 + | camphor resistance protein CrcB TERM 854 692981 - 692997 + T 83 -9.4 -4.36729 | opp_overlap 692981 AAAGACCAAAAAAAA CCCGCT GATTA AGCGGG TTTTGAATTCTTGCT TERM 855 692997 - 692981 - T 100 -9.4 -5.9663 | opp_overlap 692981 AAAGACCAAAAAAAA CCCGCT GATTA AGCGGG TTTTGAATTCTTGCT cspE 693230 - 693021 - | cold shock protein CspE TERM 856 693272 - 693256 - R 71 -7.3 -4.02302 | opp_overlap 693255 693258 TTTACATGAAAAATA GACACAA ATG CTGTGTC GGTTATCAGTACACC crcA 693965 - 693405 - | palmitoyl transferase for Lipid A TERM 857 693740 - 693763 + g 100 -4.5 -5.73978 | overlap 693732 693741 CAAAACCGCCACCCC ACGGTCGCT CGTTAT AGCGATCGG TTTTTTCTTTGTCGT TERM 858 693741 - 693762 + g 74 -8 -4.01946 | overlap 693732 693740 AAAACCGCCACCCCA CGGTCGCT CGTTAT AGCGATCG GTTTTTTCTTTGTCG dcuC 694554 - 695939 + | C4-dicarboxylate transporter DcuC TERM 859 695977 - 695941 - T 74 -8.7 -3.94746 | opp_overlap 695946 695948, overlap 695943 695944 695947 695948 TCACAGGCAAGTAAA TAGTAATGCCGGAGGCA AGT TTCCTCCGGCTTTATCA TGTCACCCACTGTGG TERM 860 695975 - 695943 - T 72 -9.1 -3.56006 | opp_overlap 695946 695948, overlap 695941 695944 695947 695948 ACAGGCAAGTAAATA GTAATGCCGGAGGCA AGT TTCCTCCGGCTTTAT CATGTCACCCACTGT TERM 861 695974 - 695944 - T 78 -12.6 -2.72881 | opp_overlap 695946 695948, overlap 695943 695941 695947 695948 CAGGCAAGTAAATAG TAATGCCGGAGGCA AGT TTCCTCCGGCTTTA TCATGTCACCCACTG TERM 862 695971 - 695947 - T 75 -9.9 -3.50456 | opp_overlap 695946 695948, overlap 695944 695943 695941 695948 GCAAGTAAATAGTAA TGCCGGAGGCA AGT TTCCTCCGGCT TTATCATGTCACCCA TERM 863 695948 - 695970 + T 95 -13.4 -4.0162 | opp_overlap 695947 695944 695943 695941 695948, overlap 695946 CAAGTAAATAGTAAT GCCGGAGGCA AGT TTCCTCCGGC TTTATCATGTCACCC TERM 864 695970 - 695948 - T 81 -13.4 -2.6955 | opp_overlap 695946 695948, overlap 695947 695944 695943 695941 CAAGTAAATAGTAAT GCCGGAGGCA AGT TTCCTCCGGC TTTATCATGTCACCC TERM 865 696288 - 696325 + T 70 -9.2 -3.4052 | TTTCCAGCATATGTT TACGCTGGCGGAAACG GGTTAG CGTTTGCCCCAGTGTA TTGATTCACTTGAAG SF0661 697168 - 696659 - | putative repressor protein TERM 866 699162 - 699138 - g 79 -3.6 -5.08824 | gap 1, overlap 699140 GCCGGAGTGAAAAAA GTTGTGG-TCA GATT TGATCCACAGC AGTTACACAGCACGG SF0662 697731 - 699185 + | putative phage transposase SF0663 699247 - 699549 + | IS600 ORF1 SF0664 699585 - 700403 + | IS600 ORF2 TERM 867 700581 - 700571 - g 72 -6.8 -4.15222 | overlap 700572 ACGGCCTTTAACAAA CTCG CGC CGAG AACCGTCGGGAAGCG SF0665 700415 - 700690 + | hypothetical protein SF0666 701628 - 700687 - | putative bacteriophage protein SF0667 702129 - 701773 - | putative bacteriophage protein SF0668 703353 - 702133 - | putative bacteriophage protein SF0669 703815 - 703357 - | putative bacteriophage protein SF0670 705457 - 703991 - | putative bacteriophage protein TERM 868 705550 - 705570 + r 81 -3.9 -5.37593 | overlap 705552 705553 AACGTTTGGTGACGG TATCTCGCG TTT TGCGAGGTC TTTTTTACTTTCGAC TERM 869 705552 - 705568 + r 72 -6.5 -4.31698 | overlap 705550 705553 CGTTTGGTGACGGTA TCTCGCG TTT TGCGAGG TCTTTTTTACTTTCG SF0671 706217 - 705678 - | putative bacteriophage protein SF0672 707107 - 706202 - | insertion element IS2 transposase InsD SF0673 707430 - 707065 - | insertion sequence 2 OrfA protein SF0674 708129 - 707506 - | putative bacteriophage protein SF0675 708904 - 708140 - | putative bacteriophage protein TERM 870 708715 - 708743 + g 74 -6.1 -4.57569 | TGGCAGGCTTTCTGC TGGTACGCA CTTTCCTTTTT TGCGTACCA TTTTTGCAAACCTGC SF0676 709099 - 709611 + | hypothetical protein SF0677 709982 - 710320 + | IS911 ORF1 TERM 871 710426 - 710406 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 872 710778 - 710767 - g 77 -5.8 -4.63218 | opp_overlap 710772 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SF0678 710347 - 711186 + | IS911 ORF2 SF0679 711215 - 711637 + | putative bacteriophage protein TERM 873 711718 - 711730 + T 100 -6.2 -5.96219 | opp_overlap 711717 GACATTTGAAAGAGC CCGC TTTAT GCGG TTTTTTTTATACCTG TERM 874 712397 - 712412 + T 77 -3.9 -5.26316 | GGAACACACTCTTAA CTGCC TTGGCT GGCGG TTTTTTGTACAGTGC TERM 875 712750 - 712774 + T 100 -11.5 -5.64421 | GGTAAAGGTGATTCA GGCCATCAG AGTTTTG CTGATGGCC TTTTTTCTTTCCGAT TERM 876 712884 - 712836 - T 73 -2.2 -5.13473 | opp_overlap 712862 712863 712870 712875 712879, overlap 712838 712842 712844 ATCAGATGGAAAAAA TATCAACAGGCATTGCCTACGG CACCT CCGCCGGCAGTGCCGGCTACTG GTTTTTGCAGTGGTT TERM 877 712878 - 712842 - T 79 -10 -3.66995 | opp_overlap 712862 712863 712870 712875, overlap 712838 712836 712844 TGGAAAAAATATCAA CAGGCATTGCCTACGG CACCT CCGCCGGCAGTGCCGG CTACTGGTTTTTGCA TERM 878 712876 - 712844 - T 79 -11.2 -3.39574 | opp_overlap 712862 712863 712870 712875, overlap 712842 712838 712836 GAAAAAATATCAACA GGCATTGCCTACGG CACCT CCGCCGGCAGTGCC GGCTACTGGTTTTTG SF0680 713768 - 712950 - | IS600 ORF2 SF0681 714106 - 713804 - | IS600 ORF1 SF0682 714382 - 716241 + | putative bacteriophage protein SF0683 717055 - 716216 - | IS911 ORF2 TERM 879 716624 - 716635 + g 77 -5.8 -4.63218 | opp_overlap 716620 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 880 716976 - 716996 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF0685 717420 - 717082 - | IS911 ORF1 SF0684 717477 - 718355 + | putative replication protein DnaC TERM 881 718385 - 718408 + G 72 -8.8 -3.85698 | overlap 718388 CGTAACGATGACCTT GAAGGCGCTG TCAT CGGCGCGTTC TTTCTGCGCGGAGCA TERM 882 719319 - 719307 - g 81 -6.2 -4.82901 | TCGGGCTGATAAAAA CCCG AACCA CGGG GCGTCATGACCTTGC SF0686 718352 - 719743 + | putative helicase SF0687 719740 - 719997 + | putative bacteriophage protein TERM 883 720084 - 720070 - f 78 -5.6 -4.83169 | opp_overlap 720069 720070, overlap 720056 AGCCCGGGATAAAAA TCACCG AAC CGGAGA GTATTTGATGAGCGT ybcQ 720285 - 720665 + | putative Q protein TERM 884 720755 - 720770 + F 100 -11.8 -5.28176 | opp_overlap 720755 GCCACACAGCTTAAA CCCGCC TCCG GGCGGG TTTTTTATGCCTGAA TERM 885 720770 - 720755 - f 86 -11.8 -3.65425 | opp_overlap 720755 GCCACACAGCTTAAA CCCGCC TCCG GGCGGG TTTTTTATGCCTGAA TERM 886 721526 - 721536 + G 72 -4.6 -4.64598 | opp_overlap 721489, overlap 721514 721513 721521 721530 CCTCCGCCGGCAGTG CCGG CTA CTGG TTTTTGCAGTGGTTG SF0689 721468 - 721683 + | putative S protein TERM 887 721717 - 721703 - g 72 -7.2 -4.29227 | overlap 721710 TGAAGCATGAAGAAA TGAATC AGC GATTCA ATCACCTGGAAAATG TERM 888 721815 - 721792 - g 81 -6 -4.77698 | gap 1, opp_overlap 721791 721792 GAAGATGAAAACAAA CGCCGCGATGA GCA TTAT-GCGGCG ATTTACGATTACTGC SF0690 721687 - 722316 + | hypothetical protein SF0691 722646 - 722915 + | putative endolysin R of prophage CP-933V SF0692 722912 - 723316 + | endopeptidase SF0693 723378 - 723680 + | IS600 ORF1 SF0694 724165 - 723731 - | IS629 ORF2 SF0695 724600 - 724247 - | IS629 ORF2 TERM 889 724284 - 724296 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF0696 724926 - 724600 - | IS629 ORF1 SF0697 725011 - 725829 + | IS600 ORF2 SF0698 725857 - 726180 + | putative DNA packaging protein of prophage; terminase small subunit TERM 890 726582 - 726597 + GF 73 -4 -4.83269 | gap 1, opp_overlap 726582 AACACCGGGATAATA CGC-TCA CAC TGAAGCG TTTTTCCTCTGGTGT SF0699 726152 - 726757 + | putative DNA packaging protein of prophage CP-933R; terminase large subunit TERM 891 727514 - 727496 - g 100 -6.7 -5.5112 | GCGATCAATAAAAAA TACCGCC ATGCA GACGGTA CCGAAATGACCATTT TERM 892 727679 - 727665 - g 77 -8.5 -4.12188 | opp_overlap 727664 TCACCATGCCGAAAA CCCGC AATCA GCGGG GTGTGTATCTGTGTG TERM 893 727787 - 727805 + G 76 -3.8 -5.00616 | overlap 727789 TCGTATGCCATCCGC TTTCCTGA TAA TCCGGAGA TTTTTTCGCAGACAG SF0700 726869 - 728062 + | putative DNA packaging protein of prophage CP-933R; terminase large subunit SF0701 728263 - 729318 + | head-tail preconnector gp5 TERM 894 729533 - 729546 + GF 75 -4.5 -4.77757 | gap 1, overlap 729530 729529 CGGGGGATTATTCGT C-CGCC ACG GGCGCG TTTTGATTTTTACCA TERM 895 729777 - 729758 - gf 72 -4.9 -4.61231 | overlap 729759 GCAGAGCGCGAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGCCCAGGC SF0702 729233 - 729856 + | head-tail preconnector gp5 TERM 896 729906 - 729921 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC TERM 897 730723 - 730688 - g 78 -11.2 -3.46824 | gap 1, overlap 730689 GGATGAATTAATCAA TGCGTCGGACGCCATCA GCG TGATGGC-TGCGACGCT GAACACACACGATAC TERM 898 730722 - 730689 - g 90 -14.7 -2.67613 | gap 1, overlap 730688 GATGAATTAATCAAT GCGTCGGACGCCATCA GCG TGATGGC-TGCGACGC TGAACACACACGATA SF0703 729846 - 731351 + | head-tail preconnector gp5 TERM 899 731702 - 731687 - g 77 -3.2 -5.07275 | GGATACACACAAAAA GGCGAA TGCC TTTGCC GGCAGTGCCCTGAGT SF0704 731388 - 731735 + | capsid protein small subunit TERM 900 731945 - 731935 - g 88 -8.2 -4.652 | opp_overlap 731935 731937, overlap 731926 731936 731937 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG TERM 901 732576 - 732556 - g 93 -9.7 -4.56597 | TCGTGGTGGCAAAAA CGTCCTATG TGG CAGAGGACG GTACCGAAAAACGTT SF0705 731793 - 732821 + | major capsid protein TERM 902 732830 - 732848 + F 100 -11.7 -4.88407 | opp_overlap 732842 GAAATAATCCGTGAG CGGGAGC TAAAT GCTCCCG TTTTTCATTCAATCA SF0706 732873 - 733259 + | putative DNA-packaging protein TERM 903 733382 - 733394 + G 71 -3.3 -4.77036 | GAACTTGAGGGGACA CACCT GAC AGGGG TTTTTGATGATCCCG TERM 904 733409 - 733419 + G 70 -4 -4.63218 | GTTTTTGATGATCCC GAAA GTA TTTC TTTTGTTGCCGGGGG SF0707 733271 - 733648 + | putative tail attachment protein TERM 905 733754 - 733718 - g 100 -15.9 -3.53811 | CGCATGGGCGGTAAA CCGTGTGGCGGCAAAGA TTG TTTCTGTCGCCACACGG CAGGTTGCGCAGAAT SF0708 733635 - 734219 + | putative tail component of prophage CP-933K TERM 906 734270 - 734287 + G 74 -3.3 -5.01732 | overlap 734271 CGCCTTCGGGAACAG TGTGGAG ACAG CGCCACG TTTTTTGACGGGCTT SF0709 734216 - 734617 + | putative tail component of prophage CP-933K SF0710 734622 - 735368 + | putative tail component of prophage CP-933K TERM 907 735388 - 735405 + F 100 -14.1 -4.65895 | ACGATACTCATCATT GCCCCGG TTAT CCGGGGC TTTTTGCATCCGGAG SF0711 735409 - 735813 + | putative tail component of prophage CP-933K TERM 908 736025 - 736038 + GF 76 -8.1 -4.07568 | overlap 736001 CAGCGATGCTGCGGT GGCTG ATTT CAGCC TTTTACCGGAAGAGA SF0712 735822 - 736151 + | putative tail component of prophage CP-933K TERM 909 736448 - 736430 - gf 70 -4.4 -4.5442 | overlap 736441 CCCTGAATCAGAAAA TGCGCGAG GAA CAGGCGCA GGCCAGGGCACTGGC TERM 910 736461 - 736491 + GF 75 -6.1 -4.37658 | gap 1, opp_overlap 736480, overlap 736480 GCAGGCCAGGGCACT GGCGG-AGGCGC AGGATAAA GCGGCTGCCGCC TTTTATCGCCAGATT TERM 911 736490 - 736480 - gf 74 -8.2 -3.96624 | opp_overlap 736461 736480 GAGGCGCAGGATAAA GCGG CTG CCGC CTTTTATCGCCAGAT TERM 912 737098 - 737079 - gf 95 -13.6 -3.32997 | opp_overlap 737075, overlap 737074 GGGCGAGAAATTTAA CCGTCAGC TGGC GCTGACGG GACATTATGCCGGTG TERM 913 737960 - 737943 - gf 77 -2.7 -5.14163 | gap 1, overlap 737945 737947 AGCCATTAAGAAAAA TACACGGG CAA CCCGTA-A TGATGAGGCCACCCG TERM 914 737959 - 737945 - gf 76 -7.8 -4.19587 | overlap 737943 737947 CCATTAAGAAAAATA CACGGG CAA CCCGTA ATGATGAGGCCACCC TERM 915 737957 - 737947 - gf 72 -8.2 -3.67974 | overlap 737945 737943 ATTAAGAAAAATACA CGGG CAA CCCG TAATGATGAGGCCAC TERM 916 738540 - 738514 - gf 76 -5 -4.78077 | CTGAATGAAAACAAA CGCTACTGGCAG GAA CTGGAAGTGGCG CAGGGCGACTGGAAA SF0713 736123 - 739164 + | putative tail length tape measure protein precursor TERM 917 739359 - 739390 + G 100 -15.2 -3.35798 | overlap 739355 TTTCTGGAACGGCAC GGTGGCGTCCGC GCATTTCA GTGGACGCCACC TTATGACTGGAAACT SF0714 739164 - 739493 + | putative minor tail protein TERM 918 739642 - 739628 - g 80 -5.7 -4.94972 | GAGCAGAACGAAAAA GGTGA GCCGG TCACC TGGCAGGGGCGGCAG TERM 919 739804 - 739824 + G 90 -9.7 -4.42653 | overlap 739806 CGGCGGAACGGTGGT CCGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT SF0715 739493 - 740191 + | minor tail protein TERM 920 740222 - 740206 - gf 70 -9.5 -3.03214 | opp_overlap 740215, overlap 740208 AATCCATGACACAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA TERM 921 740327 - 740312 - gf 70 -10.4 -2.5474 | overlap 740311 740309 TCCCAGCGAGAATAT CTCCGG TGAG CCGGAG GAACGGTTCCGGATG TERM 922 740701 - 740731 + GF 74 -6 -4.45945 | overlap 740700 740698 AGGTGCCGTTGTCAT CAGCACAACCGGGC GAT GTGCTGCTGTGCTG TTTTGGTTCATCGGT SF0716 740196 - 740939 + | putative tail assembly protein SF0717 740903 - 741478 + | putative tail component TERM 923 741495 - 741518 + F 70 -9.6 -3.01125 | opp_overlap 741487 741500, overlap 741500 GCAAAATGTTTCATG TGAAACCGCC TGCG GGCGGTTTTG TCGTTTATGGAGCGT TERM 924 741500 - 741513 + F 93 -9.5 -4.64846 | opp_overlap 741500, overlap 741495 ATGTTTCATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 925 741513 - 741500 - f 75 -9.5 -3.60098 | opp_overlap 741495 741500 ATGTTTCATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 926 741689 - 741669 - g 71 -3.1 -4.7497 | TGGATGGATTAAAAA GCGTGCTGC TGA ACGGTACGC CGGTCCTGGATAGCG TERM 927 743300 - 743275 - g 72 -9.7 -3.30441 | GAGTATCCGTGAGAA CGACGACGGCA CGTA TGCCATCACCG CCGTGCAGCATGTGC TERM 928 744202 - 744173 - g 70 -6.5 -4.18367 | CAGCAGATACAGAAA GTTCAGGTTGATA CAAA TAATAACCTGAAC AGCATGTGGGCTGTG SF0718 741539 - 745018 + | host specificity protein TERM 929 745038 - 745055 + F 100 -11.3 -5.4505 | opp_overlap 745028 745036 TATAACCCAGATACG GGCACCA GAAA TGGTGCC TTTTTTATTGCAGAA SF0719 745086 - 745685 + | putative membrane protein precursor TERM 930 745713 - 745732 + G 100 -10 -4.85599 | gap 1, opp_overlap 745713 CACAGTGTTATGACA GCCCG-CTG GTT CAGGCGGGC TTTTTGTGGGGTGAA SF0720 745707 - 746810 + | putative tail component encoded by cryptic prophage CP-933M SF0721 747111 - 747734 + | putative tail component of prophage CP-933K TERM 931 747849 - 747872 + T 93 -10.2 -4.58395 | opp_overlap 747846 747845, overlap 747851 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 932 747851 - 747870 + T 100 -15 -3.90762 | opp_overlap 747846 747845, overlap 747849 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_1 749677 - 747914 - | invasion plasmid antigen TERM 933 750008 - 749974 - R 100 -10.1 -5.24129 | opp_overlap 749974 TGCGTTGACAAAAAA TTAGCGCAAGAGGAC AAAAA ATCACCTTGCGCTAA TGCTCTGTATCAGGT TERM 934 750253 - 750227 - R 83 -13.8 -2.53759 | opp_overlap 750224, overlap 750232 750234 AATACCTTTAAGTGA TACCAGATGGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA ybhB 750736 - 750260 - | putative kinase inhibitor protein bioA 752084 - 750795 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioB 752171 - 753211 + | biotin synthesis, sulfur insertion? TERM 935 753251 - 753231 - g 76 -9.6 -3.77302 | overlap 753227 GCAGGAGAAAATCAA CGCGGCGC TCGAT GCGCGGCG TGCTGCCGATGCCCT bioF 753208 - 754362 + | 8-amino-7-oxononanoate synthase bioC 754349 - 755104 + | biotin biosynthesis protein BioC bioD 755097 - 755774 + | dithiobiotin synthetase TERM 936 756570 - 756555 - g 72 -4.6 -4.63218 | opp_overlap 756556, overlap 756556 TTGCGCCCAACAAAA CGCTGG CGGC CCAGCT GTATGGCGAAATGAA TERM 937 757161 - 757151 - g 70 -6.8 -4.1421 | GAGATCAAAGAAGAA CTGG CCG CCAG ACGCAAAGTGCTGTT TERM 938 757204 - 757190 - g 75 -5.7 -4.67697 | overlap 757183 757192 TTGGAAAACAACAAA CTGCT GGAAG AGCAG CGGCTGACCCAGCGT uvrB 756353 - 758374 + | excinuclease ABC subunit B TERM 939 758465 - 758522 + T 100 -15.5 -3.12482 | opp_overlap 758488 758489, overlap 758465 GCAATATATTGAATT TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCA CTTTGTCTTCAATAG TERM 940 758465 - 758523 + T 87 -9.5 -4.21607 | gap 1, opp_overlap 758488 758489, overlap 758465 GCAATATATTGAATT -TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCAC TTTGTCTTCAATAGG ybhK 759474 - 758566 - | putative structural protein moaA 759871 - 760860 + | molybdenum cofactor biosynthesis protein A moaB 760882 - 761394 + | molybdopterin biosynthesis protein B moaC 761397 - 761882 + | molybdenum cofactor biosynthesis protein C moaD 761875 - 762120 + | molybdopterin synthase small subunit TERM 941 762394 - 762404 + G 80 -5.4 -4.89852 | GGAATTATGGCCGGG CGAT GAA ATCG TTTTTGTCGGTGTCA MoaE 762122 - 762574 + | molybdopterin synthase large subunit TERM 942 762551 - 762574 + F 76 -2.3 -5.4505 | overlap 762558 GCCCGGGAGAGCGAT CTGCAGGCG GCAAAA CGCTGGTAG TTTTTTGTTAGCCGG ybhL 762711 - 763415 + | hypothetical protein TERM 943 763435 - 763453 + F 100 -8.1 -5.84381 | TTTTCACCATCACTA TCCCGGC CATGT GTCGGGA TTTTTTTCTTACTAA TERM 944 763535 - 763565 + F 70 -4.8 -4.42851 | opp_overlap 763542, overlap 763530 AATCGTTTTCCGTAT CCATAAATACAAAA GTA TTTTGTATGCGTGG TTTTAAATTTATTGA TERM 945 763940 - 763967 + G 85 -7 -4.76041 | gap 1 TGTATATGCCATTAT CATCGTGTTCAGC ACT GC-GGGCGCGATG TTTTTAATCAGTATG ybhM 763620 - 764333 + | hypothetical protein ybhN 765325 - 764369 - | hypothetical protein TERM 946 765074 - 765088 + g 90 -11.4 -3.86015 | opp_overlap 765064 765062 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA ybhO 766566 - 765325 - | cardiolipin synthase 2 ybhP 767324 - 766563 - | hypothetical protein TERM 947 766616 - 766653 + g 77 -6.2 -4.62783 | gap 1, overlap 766619 766619 AAAGGTGTCGCCATG TCCGCAGCGGCAACGCG GTTGG CGCGCTGGCGCTG-GCA TTTTTGACGTAGATC ybhQ 767457 - 767867 + | hypothetical protein ybhR 768935 - 767829 - | hypothetical protein TERM 948 768761 - 768795 + g 70 -10 -3.21912 | GTTCCACCGAATGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTAGTCACTTCCAGC ybhS 770079 - 768946 - | hypothetical protein ybhF 771823 - 770072 - | putative ATP-binding component of a transport system TERM 949 770928 - 770912 - G 70 -5.1 -4.41302 | CAGCAAATCAATAAA CGCATCT TCA AAACGCG GCGTAGTTTCGTTGA TERM 950 771566 - 771587 + g 93 -8.7 -4.7373 | gap 1, opp_overlap 771560, overlap 771566 771568 CGGCATATAGCCGAG C-ACGGCGTG CAG CGCGCCGTCG TTTTTGATCGGATCA TERM 951 771568 - 771584 + g 80 -11.5 -3.28472 | opp_overlap 771560, overlap 771566 771566 GCATATAGCCGAGCA CGGCGTG CAG CGCGCCG TCGTTTTTGATCGGA SF0745 772799 - 771801 - | hypothetical protein ybiH 773482 - 772799 - | putative DNA-binding transcriptional regulator TERM 952 773413 - 773425 + g 81 -4.8 -5.09173 | opp_overlap 773399 773400 ACTGCGCCAGTGCGG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 953 773483 - 773506 + H 73 -9.8 -3.37354 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCCATATG rhlE 773699 - 774919 + | ATP-dependent RNA helicase RhlE TERM 954 774981 - 775012 + T 75 -10 -3.53012 | opp_overlap 774991, overlap 774982 TTGCATGCTTTTGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTCACAACAAGCAC TERM 955 774982 - 775011 + T 81 -13.5 -2.71712 | opp_overlap 774991, overlap 774981 TGCATGCTTTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTCACAACAAGCA ybiA 775575 - 775093 - | hypothetical protein TERM 956 775950 - 775927 - g 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT GAGT ACCGCCAACG TGGCGTTGCAGGATC dinG 775695 - 777845 + | ATP-dependent DNA helicase DinG TERM 957 777828 - 777841 + F 71 -9.5 -3.25223 | opp_overlap 777824 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 958 777901 - 777928 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 777901 777899 777897 777920 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC ybiB 777873 - 778835 + | hypothetical protein TERM 959 778847 - 778870 + F 95 -12.5 -4.07568 | TTAATTTTTATCTCA GCCGGATGA GCCACG TCATCCGGC TTTTACCCCACCGCA ybiC 778976 - 780061 + | hypothetical protein TERM 960 780089 - 780068 - T 100 -13.7 -5.81412 | GCCAGCTAAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT TERM 961 780213 - 780246 + T 70 -9.5 -3.07344 | opp_overlap 780223 780225 780226, overlap 780225 780226 GGTTCGGATTTTGTA GGCCTGATAAGACGC GGTA GCGTCGCATCAGGCA TCTGTTGCCGGATGC ybiJ 780550 - 780290 - | hypothetical protein TERM 962 780423 - 780441 + g 71 -3.1 -4.79657 | overlap 780409 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 963 780600 - 780615 + r 83 -4 -5.40072 | overlap 780601 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTACGAGAGA ybiI 781081 - 780815 - | hypothetical protein ybiX 781832 - 781155 - | putative hydroxylase TERM 964 781235 - 781251 + g 73 -3.7 -4.87786 | overlap 781237 TTTCACCATAGCGGC TTTTCAG CGA CTGAATA TTTTTGTCCAGTTCA TERM 965 781866 - 781849 - H 100 -12.7 -4.58283 | CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ATCTGAATCAGAAAT TERM 966 783815 - 783805 - H 71 -6.8 -4.07124 | CACCACGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 967 783915 - 783940 + H 100 -9.8 -5.61596 | opp_overlap 783915 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 968 783940 - 783915 - H 72 -9.1 -3.61398 | opp_overlap 783915 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SF0755 783930 - 785276 + | IS4 orf TERM 969 785287 - 785258 - T 89 -9.3 -4.59109 | overlap 785260 785281 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACCCACGCCGGGGA TERM 970 785285 - 785260 - T 100 -16.3 -3.90762 | overlap 785258 785281 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACCCACGCCGGG TERM 971 785844 - 785823 - T 74 -7.3 -4.23434 | opp_overlap 785823 CAAAACAGGCGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT ybiM 786263 - 785859 - | hypothetical protein TERM 972 785927 - 785945 + g 71 -3 -4.86033 | overlap 785928 TAATGACATAACCTT TCGCGC CTTGTTC GCGCGC TTTTTCTGCCAGTTT TERM 973 786101 - 786111 + g 71 -3.2 -4.77036 | CGGTGGCAATCAGTA GTGT GAG GCAC TTTTTCATAATGACA ybiN 786314 - 787321 + | putative SAM-dependent methyltransferase ybiO 789381 - 787318 - | hypothetical protein TERM 974 788536 - 788586 + g 93 -2.4 -5.63517 | opp_overlap 788532 788530 788533 788543 788544, overlap 788543 GCGGATAAACAGGCT GAAAAAAGCCAGCGAATGCTCCGC AAA GTTGAGCATATGCTGGGTAATCTC TTTTTTATTTCGGAA TERM 975 788579 - 788543 - G 79 -3.5 -5.04987 | opp_overlap 788543 788536, overlap 788532 788530 788533 788544 AACAGGCTGAAAAAA GCCAGCGAATGCTCCGC AAA GTTGAGCATATGCTGGG TAATCTCTTTTTTAT TERM 976 788893 - 788918 + g 74 -11.1 -3.18264 | overlap 788900 TTGGAAAGCGATGGT GCGACTGCCTG CATT CAGGTTGTCGC TTAATACCTGGCCGA TERM 977 789392 - 789405 + r 100 -4.5 -5.8187 | gap 1, overlap 789384 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTGTTCGATA glnQ 790525 - 789803 - | glutamine ABC transporter ATP-binding protein glnP 791181 - 790522 - | glutamine ABC transporter permease protein TERM 978 791326 - 791343 + r 83 -4.1 -5.33866 | overlap 791327 GTAGCGTTATTATTT CGGTTCA GTAC TGAACCA TTTTTTGTAGATTTC glnH 792066 - 791320 - | glutamine ABC transporter periplasmic protein TERM 979 792185 - 792175 - R 80 -6.8 -4.59109 | opp_overlap 792174 792175 GAGATGCGGCAAAAA CGTG ATG CACG ATTTATAGGGCAATA TERM 980 792252 - 792210 - R 80 -12.8 -3.06315 | opp_overlap 792217 792251, overlap 792247 GCAATACCCTGAAGA TGCACCATTCTGGGGCACCA ATC TGGTGCGCTAAAATTGTGCA CTCAACACAGTGATT TERM 981 792313 - 792294 - R 77 -3.6 -5.16237 | opp_overlap 792294 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATGTGGAT TERM 982 792407 - 792429 + r 79 -7.6 -4.40804 | opp_overlap 792408, overlap 792408 GGGCTGCAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGGGTACTA TERM 983 792428 - 792408 - R 100 -13.3 -5.07652 | opp_overlap 792407 792408 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT TERM 984 792408 - 792428 + r 77 -11.1 -3.24 | opp_overlap 792408, overlap 792407 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT dps 792973 - 792470 - | DNA starvation/stationary phase protection protein Dps TERM 985 792877 - 792892 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTGTC TERM 986 793263 - 793234 - R 95 -13.1 -3.96827 | opp_overlap 793231, overlap 793257 AAAAGTAGCGAGAAA TTCTGCATGGTTA TGCA TAACCATACAGAA ATGTAAATTTAATTA ybiF 794159 - 793272 - | threonine and homoserine efflux system TERM 987 794351 - 794335 - H 79 -9.5 -3.72315 | opp_overlap 794335 794334, overlap 794333 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 794512 - 795027 + | outer membrane protein X TERM 988 795042 - 795071 + T 100 -12.3 -4.70879 | opp_overlap 795048, overlap 795048 ATCACTTTGGTGATA TAAAAATCCGCCT CTCG GGGCGGATTTTTG TTTTTAAGGTTTCGG TERM 989 795065 - 795048 - T 91 -8.4 -4.96848 | opp_overlap 795042 795048 TTGGTGATATAAAAA TCCGCC TCTCGG GGCGGA TTTTTGTTTTTAAGG TERM 990 795048 - 795065 + T 100 -9.1 -5.61881 | opp_overlap 795048, overlap 795042 TTGGTGATATAAAAA TCCGCCT CTCG GGGCGGA TTTTTGTTTTTAAGG ybiP 796658 - 795075 - | putative enzyme TERM 991 795474 - 795499 + g 70 -4.7 -4.50159 | TAAATCGTCCGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTCGATTGCA TERM 992 796629 - 796614 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGATTCTTTG TERM 993 796909 - 796932 + H 76 -8.1 -4.05322 | opp_overlap 796911, overlap 796911 ATAAAAGCAGGAGTG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCTGAAGGTTT TERM 994 796911 - 796930 + H 79 -10.7 -3.615 | opp_overlap 796911, overlap 796909 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCTGAAGGT TERM 995 796930 - 796911 - H 74 -10.7 -3.12803 | opp_overlap 796911 796909 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCTGAAGGT SF0767 797244 - 797711 + | manganese transport regulator MntR TERM 996 797969 - 797981 + G 70 -6.9 -4.04319 | overlap 797963 ATGTTTATGGTGCTG GCGGC GGC GCTGC TTTCTACCTTTCTGA ybiR 797708 - 798826 + | hypothetical protein TERM 997 798845 - 798863 + T 100 -11 -4.75954 | opp_overlap 798845 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTGTTTTACGTTTT TERM 998 798863 - 798845 - T 100 -8.8 -5.63517 | opp_overlap 798845 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTGTTTTACGTTTT ybiS 799804 - 798884 - | hypothetical protein ybiT 800023 - 801615 + | putative ATP-binding component of a transport system TERM 999 801700 - 801676 - T 72 -8.5 -3.79633 | overlap 801674 GACAAATGCAAAATA GCCTGATGCGC TAC GCTTATCAGGC CTACGCAGTACCTGT ybiU 803121 - 801856 - | hypothetical protein TERM 1000 801959 - 801969 + g 88 -8.2 -4.62069 | CGCGGGAAGTCGCCC GGCG ATG CGCC TTTTTCCAGTGCGGC TERM 1001 802501 - 802464 - G 74 -7.6 -4.08394 | overlap 802452 802465 AGACGTTGGCGAAAA CGTGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGCC CCGGAGTCGGTATGC TERM 1002 802500 - 802465 - G 72 -11.1 -3.04715 | overlap 802464 GACGTTGGCGAAAAC GTGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGC CCCGGAGTCGGTATG TERM 1003 803264 - 803246 - R 100 -11.7 -4.43173 | AAAAAGAAGGGAAAA CCGGAGC GCATG GCTCCGG TAGAGAGGTCAGCTG SF0772 804088 - 803273 - | hypothetical protein ybiW 806666 - 804234 - | putative formate acetyltransferase TERM 1004 804521 - 804533 + g 71 -9.1 -3.55444 | opp_overlap 804519 CGCCGCCGAGAATCG CTGCC GTA GGCAG TTTACCCACTGAGCC TERM 1005 806217 - 806231 + g 71 -2.8 -4.77438 | opp_overlap 806213 CGCTTTAATGATGCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT ybiY 807598 - 806672 - | putative pyruvate formate-lyase 2 activating enzyme TERM 1006 806937 - 806950 + g 79 -3.7 -5.11033 | overlap 806934 ATAATGATTTTTTTG CCCGC TGCG GCGAG TTTTTTCAGGTTATC TERM 1007 807133 - 807116 - G 76 -12.7 -2.52834 | overlap 807115 TACCGCAGTATGAAT GCCTGCC TCGT GGCAGGC TTGCAGCAGCGCCGT mipB 807702 - 808364 + | fructose-6-phosphate aldolase TERM 1008 808470 - 808510 + T 77 -10.3 -3.37474 | opp_overlap 808463 808464 808496 808497, overlap 808471 808501 CCAGATAAGGCGTTC ACGCCGCATCTGGCGTCTG GAG CAAATGCCTGATGCGACGC TTGTCGCGTCTTATC TERM 1009 808471 - 808509 + T 83 -13.8 -2.62003 | opp_overlap 808463 808464 808496 808497, overlap 808470 808501 CAGATAAGGCGTTCA CGCCGCATCTGGCGTCTG GAG CAAATGCCTGATGCGACG CTTGTCGCGTCTTAT TERM 1010 808530 - 808496 - T 72 -8.5 -3.72576 | opp_overlap 808471 808470 808501, overlap 808464 808497 GGCGTCTGGAGCAAA TGCCTGATGCGACGC TTGTC GCGTCTTATCAGGCT TGGAGGTGGCAATTA TERM 1011 808529 - 808497 - T 77 -12 -2.83403 | opp_overlap 808471 808470 808501, overlap 808464 808496 GCGTCTGGAGCAAAT GCCTGATGCGACGC TTGTC GCGTCTTATCAGGC TTGGAGGTGGCAATT TERM 1012 808501 - 808520 + T 73 -10 -3.33261 | opp_overlap 808464 808497 808496, overlap 808471 808470 CTGGAGCAAATGCCT GATGCGAC GCTT GTCGCGTC TTATCAGGCTTGGAG moeB 809292 - 808543 - | molybdopterin biosynthesis protein MoeB TERM 1013 808631 - 808662 + g 79 -10.1 -3.79668 | opp_overlap 808623 TACATGACGATTTTC CCGCTGGCCGGTT TGCCAT AACCTGCCAGCAG TTTGATCGCTTCCAT moeA 810527 - 809292 - | molybdopterin biosynthesis protein MoeA TERM 1014 809636 - 809624 - G 78 -10.5 -3.53444 | TCAGCGTCGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 1015 809830 - 809820 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGTGGATCGT TERM 1016 809994 - 809984 - G 87 -4.6 -5.252 | CACCGGTAGAAAAAA GCGC TAC ACGC ACTTTACGAATCACC TERM 1017 810436 - 810424 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG AAC CAGTG GCAGCGTTTCCTGGG TERM 1018 811395 - 811409 + G 70 -5.6 -4.30719 | opp_overlap 811396, overlap 811396 GATGCTACGCCAATA ACGCCA GTG TGGCGG TTTCTTGTACCGGCA TERM 1019 811408 - 811396 - g 73 -9.1 -3.65224 | opp_overlap 811395 811396 ATGCTACGCCAATAA CGCCA GTG TGGCG GTTTCTTGTACCGGC ybiK 810731 - 811696 + | L-asparaginase TERM 1020 812211 - 812187 - g 77 -11.4 -3.15544 | opp_overlap 812183 812201 CGTTATTCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG SF0779 811716 - 813554 + | glutathione transporter ATP-binding protein TERM 1021 815042 - 815026 - g 71 -3 -4.82901 | gap 1 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG SF0780 813574 - 815112 + | putative transport protein TERM 1022 815551 - 815576 + G 71 -3.2 -4.87291 | overlap 815539 CGGTGTCGGGGATCT CGTTTCCGGC ATTTGC GCTGGGGATG TTTTTAATTCAGGTA TERM 1023 815955 - 815967 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT SF0781 815130 - 816050 + | putative transport system permease protein SF0782 816053 - 816964 + | putative transport system permease protein TERM 1024 817104 - 817075 - f 78 -6.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACTATTT TTGCAGCGGC ACAGCGTTCAGATAG TERM 1025 819083 - 819070 - f 70 -2.3 -4.95484 | CATCATGAAAGAAAA TGGCC TGAA GGCGA ACAGCCTCTGTGTTG TERM 1026 819523 - 819534 + G 79 -4.4 -4.95806 | overlap 819532 AGTTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT TERM 1027 820057 - 820047 - g 72 -8.2 -3.72051 | overlap 820040 TTTAAGAACGGTAAA CCGG TGA CCGG TGATGAATATAATGC SF0784 819492 - 820820 + | hypothetical protein TERM 1028 820869 - 820821 - T 71 -9.8 -3.1505 | gap 1, opp_overlap 820805 820829 820833, overlap 820824 ATTAGCTGGCAGTAA TCATTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAATTA AACCCGGCTACCCCA TERM 1029 820866 - 820824 - T 74 -11.5 -2.78018 | gap 1, opp_overlap 820829 820833, overlap 820821 AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC TERM 1030 820829 - 820862 + T 73 -9.5 -3.33696 | opp_overlap 820824 820821, overlap 820833 GCAGTAATCATTATT CGCAGGCCGGACAAA TGAT TTTGCCCGGCCTGAA TTAATTAAACCCGGC TERM 1031 820833 - 820858 + T 81 -13.3 -2.60244 | opp_overlap 820824 820821, overlap 820829 TAATCATTATTCGCA GGCCGGACAAA TGAT TTTGCCCGGCC TGAATTAATTAAACC yliG 822192 - 820867 - | hypothetical protein TERM 1032 822172 - 822160 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 822405 - 822788 + | biofilm formation regulatory protein BssR TERM 1033 822784 - 822828 + F 76 -5 -4.84359 | opp_overlap 822792 822796, overlap 822792 822793 822796 CCATGCTTGAGAAGG CCTGAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 1034 822820 - 822792 - f 83 -9.6 -4.12198 | opp_overlap 822784 822792 822793 822796, overlap 822796 GAGAAGGCCTGAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1035 822793 - 822820 + F 72 -9.3 -3.59063 | gap 1, opp_overlap 822792 822796, overlap 822792 822784 822796 AGAAGGCCTGAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1036 822816 - 822796 - f 93 -12.6 -3.67175 | opp_overlap 822793 822792 822784 822796, overlap 822792 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1037 822796 - 822816 + F 88 -12.6 -3.48703 | opp_overlap 822796 822792, overlap 822793 822792 822784 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1038 823364 - 823376 + G 77 -2.7 -5.16841 | CGGCTGGTATTCGAC GGTAA AGG TTATC TTTTTATTGCTCTGG TERM 1039 823660 - 823645 - g 71 -2.4 -4.92239 | overlap 823649 GCAAAAAGGCAAAAA CTACGG CTGG CCGCTG GCAACCTGGGGAATC yliI 822899 - 823837 + | putative dehydrogenase yliJ 824642 - 824010 - | putative transferase TERM 1040 824914 - 824929 + G 87 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT SF0789 824861 - 825877 + | putative D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 SF0790 825906 - 826208 + | IS600 ORF1 SF0791 826244 - 827062 + | IS600 ORF2 SF0792 827089 - 827352 + | putative D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 TERM 1041 827364 - 827388 + T 90 -13.6 -3.39862 | opp_overlap 827364 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT TERM 1042 827388 - 827364 - T 82 -12.1 -3.30159 | opp_overlap 827364 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT deoR 828157 - 827399 - | DNA-binding transcriptional repressor DeoR TERM 1043 827909 - 827920 + g 79 -3.6 -5.06414 | overlap 827911 TGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG ybjG 828811 - 828215 - | undecaprenyl pyrophosphate phosphatase TERM 1044 828593 - 828583 - G 72 -5.4 -4.56597 | overlap 828585 GGTCGTGCGGAAAAA GATG TCC CATC GTCCAGGACACAAAC cmr 829096 - 830322 + | chloramphenicol resistance pump Cmr TERM 1045 830354 - 830328 - T 91 -6.6 -5.47399 | opp_overlap 830328 CGAAGGGTAAAAAAA TGCCTGATTG ATTTGTG CGATCAGGCA TTCTCGAATTAATGG TERM 1046 830328 - 830354 + T 70 -8.8 -3.37464 | opp_overlap 830328 CGAAGGGTAAAAAAA TGCCTGATTG ATTTGTG CGATCAGGCA TTCTCGAATTAATGG ybjH 830647 - 830363 - | hypothetical protein SF0797 831521 - 830733 - | hypothetical protein SF0798 832756 - 831548 - | putative DEOR-type transcriptional regulator TERM 1047 832336 - 832323 - G 71 -3.1 -4.85599 | gap 1 CCCAGGCTATAAAAA CCG-TG CAT CATCGG CAAAACCGTTTTATT SF0799 832840 - 833376 + | putative DEOR-type transcriptional regulator TERM 1048 833438 - 833402 - T 85 -3.7 -5.60689 | TTAGATAACAAAAAA CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG CTCCACAAAATGGGG TERM 1049 833497 - 833467 - T 74 -3.3 -4.97158 | gap 1, opp_overlap 833494 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG SF0800 835236 - 833551 - | hypothetical protein TERM 1050 834135 - 834121 - G 83 -10 -4.09108 | opp_overlap 834120 834119 834117 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACGCG TERM 1051 834401 - 834440 + g 72 -7.8 -3.85817 | GGATCGAGTCGGGCA TGGGCGTCGGGATAGCCT ACCA ACGCTATTTCATCGCCCA TTTGTAGCACGGCAT ybjM 835506 - 835883 + | hypothetical protein TERM 1052 835909 - 835877 - T 90 -6.9 -5.40625 | opp_overlap 835885, overlap 835885 ACAGCACAGAAAAAA TCAGTAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 1053 835901 - 835885 - T 80 -10.1 -3.98747 | opp_overlap 835885, overlap 835877 GAAAAAATCAGTAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG TERM 1054 835913 - 835925 + T 71 -3.3 -4.87133 | opp_overlap 835913 GGGCTTGTCAGACGA TCAGG CGT CCAGA TTTTCTTTCACCCAT grxA 836170 - 835913 - | glutaredoxin 1 ybjC 836330 - 836617 + | hypothetical protein SF0804 837902 - 836694 - | iso-IS10R ORF mdaA 837954 - 838661 + | nitroreductase A TERM 1055 839186 - 839239 + G 76 -11 -3.27475 | gap 1, opp_overlap 839206, overlap 839184 839187 839206 CGTCGTGCTGGCGGA GACTCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 1056 839187 - 839238 + G 90 -14.5 -2.56271 | gap 1, opp_overlap 839206, overlap 839186 839184 839206 GTCGTGCTGGCGGAG ACTCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 838722 - 839624 + | ribosomal protein S6 modification protein ybjN 839712 - 840188 + | putative sensory transduction regulator TERM 1057 840196 - 840239 + F 93 -14 -3.65046 | gap 1, opp_overlap 840192 840193, overlap 840196 TCCACTGATAATTCC TTTCG-AGCACGCAGTCGCTG CCG CAGTGACTGCGCGCTGCAAAA TTATCTGCTGTTTTT TERM 1058 840196 - 840238 + F 84 -14.2 -2.77401 | opp_overlap 840192 840193, overlap 840196 TCCACTGATAATTCC TTTCGAGCACGCAGTCGCTG CCG CAGTGACTGCGCGCTGCAAA ATTATCTGCTGTTTT TERM 1059 840482 - 840464 - f 82 -3.2 -5.60993 | opp_overlap 840464 GCGCCGATAAAAAAA TATGCA CGTTTAT TGCATA TCTTTCAGTGTGACA TERM 1060 841509 - 841497 - g 72 -6.9 -4.20918 | GTCAACGCCAATAAA GCAGC CAC GCCGC TGGTGAGTGCGGAAG potF 840540 - 841652 + | putrescine ABC transporter periplasmic substrate-binding protein TERM 1061 842314 - 842295 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 841747 - 842880 + | putrescine transporter ATP-binding subunit potH 842890 - 843843 + | putrescine ABC transporter membrane protein TERM 1062 844381 - 844391 + G 71 -3.2 -4.81083 | ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTCGTCATTACG potI 843840 - 844685 + | putrescine ABC transporter membrane protein TERM 1063 844715 - 844739 + F 95 -12.2 -4.25104 | opp_overlap 844718, overlap 844718 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG TERM 1064 844736 - 844718 - f 86 -11.7 -3.48772 | opp_overlap 844718 844715 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG TERM 1065 844718 - 844736 + F 95 -11.7 -4.25256 | opp_overlap 844718, overlap 844715 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG ybjO 844745 - 845233 + | hypothetical protein rumB 845274 - 846401 + | 23S rRNA methyluridine methyltransferase TERM 1066 846419 - 846406 - T 88 -5.9 -5.5604 | TGAAGCAATAAAAAA GCCAC AGGT GCGGC TTCAGATTGCTGATC artJ 847307 - 846576 - | arginine 3rd transport system periplasmic binding protein TERM 1067 846925 - 846949 + g 77 -7.2 -4.46757 | TTTTCCATCCCAATG CGTTTGCC TTTCAGGTC GGCAAACG TTTTGTAGGTATCTT TERM 1068 847456 - 847430 - R 100 -9.5 -6.01187 | opp_overlap 847430 AATGAAATAAAAAAA GACGGATAACT TAGTG AGTTGTCCGTC TTCATTATAAGAATT TERM 1069 847430 - 847456 + r 85 -12.4 -3.4489 | opp_overlap 847430 AATGAAATAAAAAAA GACGGATAACTT AGT GAGTTGTCCGTC TTCATTATAAGAATT artM 848267 - 847599 - | arginine transporter permease subunit ArtM artQ 848983 - 848267 - | arginine transporter permease subunit ArtQ TERM 1070 848819 - 848792 - G 70 -5.6 -4.33956 | gap 1, overlap 848794 848797 GCCAAAATAGATAAA CAGCACTACCAGA ATT TCTGGCAG-GCCA CGCAGAATGGTTACC TERM 1071 848817 - 848794 - G 72 -8.2 -3.75733 | gap 1, overlap 848792 848797 CAAAATAGATAAACA GCACTACCAGA ATT TCTGGCAG-GC CACGCAGAATGGTTA TERM 1072 848939 - 848929 - G 74 -8.2 -3.99898 | opp_overlap 848935, overlap 848930 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 849721 - 848990 - | arginine 3rd transport system periplasmic binding protein artP 850467 - 849739 - | arginine transporter ATP-binding subunit ybjP 851200 - 850685 - | putative lipoprotein TERM 1073 852662 - 852647 - g 74 -3.2 -4.88405 | opp_overlap 852647 AATTTTGAAACAAAA CCTGTT CATT ATCAGG ATTTATTAACACGAT SF0820 851849 - 853618 + | hypothetical protein SF0821 853829 - 854152 + | hypothetical protein SF0822 854149 - 854979 + | putative regulator SF0823 856025 - 854976 - | putative nucleotide di-P-sugar epimerase or dehydratase TERM 1074 855112 - 855140 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGGCGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 857518 - 856088 - | putative dTDP-glucose enzyme TERM 1075 856605 - 856618 + g 84 -3.8 -5.20606 | TCGTAGCCCCAGTCG CTGG AGTTGA CCAG TTTTTCTTCCTCTTT ybjU 858530 - 857529 - | L-threonine aldolase poxB 860285 - 858567 - | pyruvate dehydrogenase TERM 1076 860408 - 860383 - R 82 -11.9 -3.38581 | overlap 860381 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATAAGGCGATTATGC SF0827 861386 - 860418 - | HCP oxidoreductase, NADH-dependent TERM 1077 861024 - 861012 - G 70 -10.5 -2.71119 | overlap 860994 861011 ACGCATCGACATAAT CGGCG TGA CGCCG CAGCCTGCCGCCAGC ybjW 863050 - 861398 - | hydroxylamine reductase TERM 1078 863224 - 863209 - R 72 -3.2 -4.99035 | overlap 863211 TTACGCAGAGAAAAA GGCGAT GAGG ATCGGC ACTAACAGGCTAAGA ybjE 864141 - 863194 - | putative surface protein SF0830 865124 - 864219 - | insertion element IS2 transposase InsD SF0831 865492 - 865082 - | insertion sequence 2 OrfA protein aqpZ 866585 - 865890 - | aquaporin Z TERM 1079 866478 - 866460 - G 95 -12.4 -4.06903 | opp_overlap 866475 AACGGTCAAACCAAA TGCCAGCG CCA CGCCGGCA AAACCAATGCCTAAT insB 867032 - 866637 - | IS1 ORF2 insA 867334 - 867059 - | IS1 ORF1 ybjD 867786 - 869444 + | hypothetical protein ybjX 870433 - 869441 - | putative enzyme TERM 1080 869466 - 869515 + g 90 -6.6 -5.14965 | gap 3, overlap 869468 869469 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT TERM 1081 869469 - 869513 + g 73 -11.6 -2.80472 | gap 2, overlap 869468 869466 ATCGTGGCCATTTGT GGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC CGTTTTTTACTGGCG TERM 1082 870274 - 870263 - G 71 -3 -4.7373 | CGAGCGCAGCAAAAA TTTC TGGC GAAA ACTACAGCGATGCCA SF0837 870502 - 870636 + | hypothetical protein SF0838 870548 - 871663 + | macrolide transporter subunit MacA TERM 1083 871888 - 871926 + G 72 -4.6 -4.65263 | gap 3, opp_overlap 871874, overlap 871893 ATTGCCACGCTGGAC GCCG--ATGCGC-TGGCGC AACT GCGCCGCGAGCATTTCGGC TTTATTTTCCAGCGT TERM 1084 872695 - 872683 - g 75 -5.5 -4.66163 | overlap 872686 ATCGCCATCCAAAAA CAACC GTG GGTCG CCTCAGCCACACCTG TERM 1085 872927 - 872959 + G 85 -13.5 -3.25823 | ATGTGGTTGGCGAGG TGATTCTGGTCGGCA ATA TGCCCGCCAGAGTCA TTGGTGTGGCGGAAG ybjZ 871660 - 873606 + | macrolide transporter ATP-binding /permease protein TERM 1086 873642 - 873622 - T 100 -12.6 -4.96848 | opp_overlap 873622 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT TERM 1087 873622 - 873642 + T 95 -12.6 -4.35926 | opp_overlap 873622 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT cspD 873903 - 873679 - | stationary phase/starvation inducible regulatory protein CspD TERM 1088 874338 - 874348 + G 77 -6.8 -4.45738 | opp_overlap 874338 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG clpS 874226 - 874546 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1089 874554 - 874541 - f 88 -8.1 -4.85599 | TGTACGCTAGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1090 876759 - 876719 - g 90 -6.8 -5.11033 | opp_overlap 876721 GACAACCTGAAAAAA CCGCTCGCCAACGAAC TGCTGTTTG GTTCGCTGGTGGACGG CGGTCAGGTGACGGT clpA 874577 - 876853 + | ATP-dependent Clp protease ATP-binding subunit TERM 1091 876879 - 876906 + T 100 -12.8 -5.38054 | AGGTAGGTTGGTGAA GTCCGTAATCTC GTCA GGGGTTACGGAC TTTTTATTTATGGGG TERM 1092 877242 - 877223 - T 100 -10 -5.82388 | opp_overlap 877223 877221 AAATGCGAAAAAAAA GCTCGCAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1093 877538 - 877554 + T 79 -7.9 -4.40037 | opp_overlap 877538 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT TERM 1094 877554 - 877538 - T 100 -10.1 -5.56263 | opp_overlap 877538 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT infA 877815 - 877597 - | translation initiation factor IF-1 aat 878804 - 878100 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1095 878681 - 878669 - G 81 -6.3 -4.7329 | overlap 878672 AAAACCACGGAAAAA TACCA CGC TGGTA AGCCATTAACAGGCG cydC 880567 - 878846 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 882334 - 880568 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1096 882431 - 882397 - R 74 -3.4 -5.06103 | opp_overlap 882398 882401, overlap 882401 882402 ACAACGGGGAAAAAA TAAAGGCGACCCATAG TCG CAAGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1097 882427 - 882401 - R 83 -6.4 -5.04249 | opp_overlap 882398 882401, overlap 882397 882402 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT TERM 1098 882401 - 882427 + r 72 -6.4 -4.25231 | opp_overlap 882401 882397 882402, overlap 882398 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT trxB 883422 - 882457 - | thioredoxin reductase TERM 1099 883285 - 883302 + g 81 -6.9 -4.66163 | overlap 883272 TTCCACTTCCGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT lrp 883966 - 884460 + | leucine-responsive transcriptional regulator TERM 1100 884514 - 884550 + F 79 -8.8 -4.13767 | gap 1, opp_overlap 884516 884520, overlap 884517 884520 TCCTGTTAATCCATA CAG-CAACAGTACTGGG GTAA CCTGGTACTGTTGTCCG TTTTAGCATCGGGCA TERM 1101 884517 - 884546 + F 83 -13.7 -2.75577 | opp_overlap 884516 884520, overlap 884514 884520 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG TERM 1102 884520 - 884543 + F 75 -9.6 -3.52113 | opp_overlap 884520 884516, overlap 884517 884514 TAATCCATACAGCAA CAGTACTGGG GTAA CCTGGTACTG TTGTCCGTTTTAGCA TERM 1103 886303 - 886266 - g 74 -3.2 -5.00616 | opp_overlap 886272 886277, overlap 886224 886267 886268 886270 TCTGGCGTGAAAAAA GCGACACTGGCGACGG GGGCTG CCGCAACCGTTGCCGC GCCAGTCTTCAGTCT ftsK 884595 - 888623 + | DNA translocase FtsK lolA 888775 - 889389 + | outer-membrane lipoprotein carrier protein ycaJ 889400 - 890743 + | recombination factor protein RarA serS 890834 - 892126 + | seryl-tRNA synthetase TERM 1104 892166 - 892152 - f 88 -8.5 -4.74103 | opp_overlap 892152 TTCTGAATCTAAAAA GCGCC TTTAG GGCGC TTTTTTTGTCTCCCT TERM 1105 892152 - 892166 + F 100 -9.2 -5.72616 | opp_overlap 892152 TTCTGAATCTAAAAA GCGCCT TTA GGGCGC TTTTTTTGTCTCCCT TERM 1106 893301 - 893288 - g 73 -3.8 -4.78107 | CATGATCACTAAAAA CCTG GTGGAT CAGG CATTCCTCGATAAAT dmsA 892692 - 894809 + | anaerobic dimethyl sulfoxide reductase subunit A dmsB 894820 - 895437 + | anaerobic dimethyl sulfoxide reductase subunit B dmsC 895439 - 896230 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1107 896236 - 896263 + T 83 -6.2 -5.04733 | opp_overlap 896241, overlap 896241 CGCAAGCTAATCAGT AACAACCGGGGT TTCG GCCCCGGTTCTC TTTTATTTCTGCTTC TERM 1108 896258 - 896241 - T 79 -9.8 -3.77722 | opp_overlap 896236 896241 GCTAATCAGTAACAA CCGGGG TTTCGG CCCCGG TTCTCTTTTATTTCT TERM 1109 896241 - 896258 + T 87 -10.5 -4.14927 | opp_overlap 896241, overlap 896236 GCTAATCAGTAACAA CCGGGGT TTCG GCCCCGG TTCTCTTTTATTTCT ycaC 896892 - 896266 - | hypothetical protein ycaD 897207 - 898355 + | MFS family transporter TERM 1110 898397 - 898366 - f 71 -9.6 -3.26596 | opp_overlap 898366, overlap 898371 TGTAAATGAATTCAA GCAAAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1111 898366 - 898397 + F 100 -7.4 -5.82036 | opp_overlap 898366 898371 TGTAAATGAATTCAA GCAAAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1112 898664 - 898637 - f 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 1113 899004 - 899016 + G 73 -9.1 -3.62046 | GCTAAGCAGGCGTTA CAGCC TGG GGCTG TTGTTGCCCGGATCG SF0858 898668 - 899342 + | ISSfl4 ORF1 SF0859 899339 - 899686 + | ISSfl4 ORF2 TERM 1114 899937 - 899900 - g 70 -6.2 -4.1585 | overlap 899901 899905 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 1115 899959 - 899942 - g 82 -9.1 -4.19238 | overlap 899955 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA SF0860 899706 - 901307 + | ISSfl4 ORF3 SF0861 901342 - 901608 + | IS2 ORF2 SF0862 902686 - 901847 - | IS911 ORF2 TERM 1116 902255 - 902266 + g 77 -5.8 -4.63218 | opp_overlap 902251 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 1117 902607 - 902627 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF0863 903051 - 902713 - | IS911 ORF1 SF0864 903489 - 903199 - | putative bacteriophage protein SF0865 903787 - 904089 + | IS600 ORF1 SF0866 904125 - 904943 + | IS600 ORF2 SF0867 905354 - 904983 - | hypothetical protein SF0868 905680 - 905393 - | hypothetical protein TERM 1118 905852 - 905816 - R 89 -4.2 -5.74288 | gap 1, opp_overlap 905816 ATAAACAACAAAAAA CCCGCCGAAACGCTGAG AGAT CACGGCGATG-GGCGGG TTAAGTGCGGGTGCG TERM 1119 906056 - 906071 + r 83 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 1120 906150 - 906200 + r 100 -12.1 -4.64844 | gap 1, opp_overlap 906117 CAAAGCATGAAATTG GCCTCAGATTAATGTTAAGCGTCT TGCC GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC SF0869 906879 - 906313 - | hypothetical protein TERM 1121 907061 - 907076 + G 75 -11.8 -2.85402 | overlap 907069 ATGTGTGACTGCTCC CCGCCC TTTC GGGCGG TCTCCTGATGATTTG SF0870 907050 - 907427 + | hypothetical protein TERM 1122 907437 - 907449 + T 72 -5.5 -4.37886 | AATTAACCTGATTAC GAGGG TCA TCCTC TTTTATCGGAAATAA SF0871 907983 - 907561 - | putative bacteriophage protein SF0873 909522 - 908890 - | putative bacteriophage protein TERM 1123 909136 - 909156 + g 85 -8.3 -4.5852 | overlap 909137 TTTTTGATCCGTTTG TGTAACGCT GGC AGCGTTACC TTTTCGTTTCAGTTC TERM 1124 909137 - 909155 + g 80 -11.8 -3.34028 | overlap 909136 TTTTGATCCGTTTGT GTAACGCT GGC AGCGTTAC CTTTTCGTTTCAGTT TERM 1125 909535 - 909555 + r 93 -12.7 -3.68351 | CATTTGTTTTCACCT TGTAACGCT CGC AGCGTTACA TTTAACTGATACCGA SF0874 910022 - 909600 - | putative bacteriophage protein SF0875 910233 - 910006 - | DNA-binding transcriptional regulator DicC TERM 1126 910328 - 910318 - g 78 -5.4 -4.87626 | CCCTAATATGAAAAA CGAA ACC TTCG GTGCTCGCCTCTTAC SF0876 910310 - 910717 + | transcriptional repressor DicA SF0877 910920 - 911075 + | hypothetical protein TERM 1127 911151 - 911131 - T 76 -7.5 -4.30441 | overlap 911132 CTAGAAGATGCAAAA CGCCTCCAG CAA CTGGAGCCA AATGCAGGCACTGGG TERM 1128 911244 - 911224 - T 93 -11.9 -3.71487 | TATGATAGCGAAGAA GCCTTCTAC AAA GCAGAAGGC CGTGCAGGATATTCA SF0878 912427 - 911522 - | insertion element IS2 transposase InsD SF0879 912750 - 912385 - | insertion sequence 2 OrfA protein TERM 1129 913405 - 913418 + G 100 -5.2 -5.64274 | opp_overlap 913405 GACTACTGCGCATAA CCGC GCTCAG GCGG TTTTTTTATGCGTCA SF0880 913190 - 914146 + | putative bacteriophage protein TERM 1130 914339 - 914319 - f 79 -10.5 -3.58726 | CTGTGTGACAGACAA GTAAGCCCT GAT AAGGCTTAC ACTGCTGAACTTATT SF0881 914660 - 914962 + | IS600 ORF1 SF0882 914998 - 915816 + | IS600 ORF2 SF0883 916485 - 915841 - | putative exodeoxyribonuclease VIII of prophage CP-933R TERM 1131 916114 - 916135 + g 75 -5.7 -4.71828 | overlap 916116 GCAATCCTGGCAATC CTCGTGGGC GTCT GCCTGCGCG TTTTCTTCCTGGCCT TERM 1132 916144 - 916158 + g 72 -7.1 -4.21086 | overlap 916155 CTGCGCGTTTTCTTC CTGGC CTCCC GCCAG TTCTTTGGTTTCTTG TERM 1133 916552 - 916578 + r 91 -7.2 -5.49809 | overlap 916556 TCCCAGGTTCTTCAC TCAGGCCTGCAC ACT GTGCAGGCTTTC TTTTTTTCAGATTTC TERM 1134 916556 - 916574 + r 100 -14.6 -5.20328 | overlap 916552 AGGTTCTTCACTCAG GCCTGCAC ACT GTGCAGGC TTTCTTTTTTTCAGA TERM 1135 916622 - 916635 + r 82 -3.1 -5.60993 | gap 1 ATTGCAATCAGATTT GCCAGA AAT TC-GGC TTTTTTTCTGCGGGC SF0884 917647 - 916829 - | IS600 ORF2 SF0885 917985 - 917683 - | IS600 ORF1 SF0886 918051 - 918668 + | hypothetical protein TERM 1136 918783 - 918806 + F 93 -10.2 -4.58395 | opp_overlap 918780 918779, overlap 918785 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 1137 918785 - 918804 + F 100 -15 -3.90762 | opp_overlap 918780 918779, overlap 918783 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC TERM 1138 921031 - 921071 + F 79 -8 -4.48072 | gap 1, opp_overlap 921029 921027 921039 921060, overlap 921035 921060 GATCAAAATCATATC T-CAATGTACTGTTTTTTT CTTT AAAAAAACAGTACATTCTA TTTTATAATGACTGT TERM 1139 921035 - 921066 + F 100 -14.8 -4.04187 | opp_overlap 921029 921027 921039 921060, overlap 921031 921060 AAAATCATATCTCAA TGTACTGTTTTTTT CTTT AAAAAAACAGTACA TTCTATTTTATAATG TERM 1140 921085 - 921060 - f 79 -2.7 -5.40072 | gap 1, opp_overlap 921035 921031 921060, overlap 921039 921029 921027 TTTTCTTTAAAAAAA CAGTACATTCTA TTT TATAATG-ACTG TGTATTCCCATGGAA TERM 1141 922511 - 922497 - g 85 -7 -4.7373 | overlap 922499 CTACTGCATGAAAAA GGCCGC TAT GCGGTC GGGCAGGGACCAATG ybhE 921555 - 922550 + | 6-phosphogluconolactonase TERM 1142 922560 - 922590 + F 79 -12 -3.27164 | gap 1, opp_overlap 922552 922563, overlap 922553 922561 922563 CACTAACCGCTGATT TA-ACCGGCGCAG TCTCTC CTGCGCCGGTGTA TTAACTTATCTCCTG TERM 1143 922561 - 922588 + F 81 -12.7 -3.19511 | opp_overlap 922552 922563, overlap 922560 922553 922563 ACTAACCGCTGATTT AACCGGCGCAG TCTCTC CTGCGCCGGTG TATTAACTTATCTCC TERM 1144 922586 - 922563 - f 93 -15.3 -3.06133 | opp_overlap 922563 922561 922560 922553, overlap 922552 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACTTATCT TERM 1145 922563 - 922586 + F 100 -15.3 -3.15379 | opp_overlap 922552 922563, overlap 922561 922560 922553 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACTTATCT TERM 1146 924255 - 924239 - g 70 -5.1 -4.4078 | overlap 924241 CCGCTGGAACGAAAA CTGGAAA AGT TTTCCCG ACTGATAATCAGATT ybhH 923833 - 924780 + | hypothetical protein TERM 1147 924841 - 924819 - f 71 -10 -3.15732 | overlap 924817 924816 ACAATCAATAAAGGA CTTCTGTATG AGT CATACAGAAA GAACAGGATTTTAAA TERM 1148 925384 - 925367 - g 79 -4.1 -5.09426 | opp_overlap 925380 925381 CCGAACCGGAAAAAA GTCCG CGTCGTGT CGGAC ATTACCTGATGATGT ybhI 924919 - 926289 + | putative membrane pump protein TERM 1149 926433 - 926456 + F 82 -13.2 -2.89055 | TCCATTTATTATCTT TCTGCGCACT TCAC GGTGCGCAGA TATCTGGAGCATTTG TERM 1150 926507 - 926493 - g 81 -7 -4.63184 | AAGTTATCTGAAAAA GGCGTG TTT CTCGCC AGTAATAACGAAATA TERM 1151 926585 - 926574 - g 100 -5.8 -5.71638 | opp_overlap 926574 GAAGAAGCAAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT ybhJ 926472 - 928652 + | putative enzyme TERM 1152 928711 - 928759 + T 75 -9.5 -3.53811 | opp_overlap 928756, overlap 928698 928701 928741 928744 GATGCGATGCTGGCG CATCTTATCCGACCTACAAATCG CAT CGAACCGTAGGCCGGATAAGGCG TTTACGCCGCATCCG ybhC 930076 - 928793 - | putative pectinesterase SF0894 930981 - 930211 - | putative integrase encoded by prophage CP-933K; partial TERM 1153 931009 - 931025 + r 77 -3.7 -5.14965 | TGTCTTCTGCTTGAT TCCTC TGCTGGC GAGGA TTTTTTCGTAGCGAT SF0895 932011 - 931193 - | IS600 ORF2 SF0896 932349 - 932047 - | IS600 ORF1 TERM 1154 932745 - 932722 - R 100 -13.2 -5.4505 | opp_overlap 932722 GCGCGGAATAAAAAA GCGGCAACTC AATA AAGTTGCCGC TTTACGAGGAAATTA TERM 1155 932722 - 932745 + r 88 -12.5 -3.53761 | opp_overlap 932722 GCGCGGAATAAAAAA GCGGCAACT CAATAA AGTTGCCGC TTTACGAGGAAATTA pflA 933498 - 932758 - | pyruvate formate lyase-activating enzyme 1 TERM 1156 932822 - 932844 + g 72 -6.3 -4.34263 | overlap 932823 TCCATGGTCTCTTTC TTCGGTGGT TTAAC ACCATCGAG TTTGTATTCTTCACC TERM 1157 933193 - 933176 - G 71 -2.7 -4.75219 | gap 1 TAACGACGAACAAAA CCGT-TGG TAT CCAGACAG GTATGAATGCCTTCT TERM 1158 933321 - 933304 - G 72 -7.7 -3.87869 | opp_overlap 933304 GGAAGCGTTCATAAA GTGGCGA TAGG TCACCAC TTCCTTCATCAAATC TERM 1159 933615 - 933659 + r 82 -7.2 -4.80882 | gap 1, opp_overlap 933628, overlap 933616 933628 TGACAAAAAAGGCTC TCGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACGC TTTTTACTGTACGAT TERM 1160 933616 - 933658 + r 79 -10.7 -3.47806 | gap 1, opp_overlap 933628, overlap 933615 933628 GACAAAAAAGGCTCT CGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACG CTTTTTACTGTACGA TERM 1161 933647 - 933628 - R 100 -11.4 -5.00616 | opp_overlap 933616 933615 933628 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT TERM 1162 933628 - 933647 + r 83 -9.2 -4.33851 | opp_overlap 933628, overlap 933616 933615 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT pflB 935972 - 933690 - | formate acetyltransferase 1 focA 936884 - 936027 - | formate transporter TERM 1163 937238 - 937216 - R 74 -11.3 -2.86654 | opp_overlap 937216, overlap 937215 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC TERM 1164 937257 - 937287 + r 70 -2.5 -5.07652 | opp_overlap 937257 937264, overlap 937262 937264 TATAACTCAGACTAA TCATTAAGCCTAC ATTGC GTAGGCTATTTGA TTTTATTTTGCCCAG TERM 1165 937262 - 937282 + r 72 -5.4 -4.41486 | opp_overlap 937257 937264, overlap 937257 937264 CTCAGACTAATCATT AAGCCTAC ATTGC GTAGGCTA TTTGATTTTATTTTG ycaO 939050 - 937290 - | hypothetical protein TERM 1166 937636 - 937646 + g 75 -6.8 -4.41047 | overlap 937631 TCGCCACCAGCCAGC GCCA GCA TGGC TTTTAATTCACCGAT TERM 1167 939206 - 939223 + H 78 -6.3 -4.62054 | CGATCTCCACCGTAT GGCATTT GATA AAGTGCC TTTTGATTTCCTTGG SF0901 939495 - 939806 + | hypothetical protein TERM 1168 940622 - 940601 - g 71 -3 -4.82901 | gap 1, opp_overlap 940618, overlap 940603 TGGCGCGCAGAAAAA TATC-GGCC CGGCT GGCCTGACA ATCGTCATCGTTCGT serC 940005 - 941093 + | phosphoserine aminotransferase TERM 1169 941113 - 941133 + F 100 -12.6 -5.4659 | GAAATTTTGCTTAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG aroA 941164 - 942447 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1170 942558 - 942583 + F 100 -9.8 -5.61596 | opp_overlap 942558 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 1171 942583 - 942558 - f 72 -9.1 -3.61398 | opp_overlap 942558 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SF0904 942573 - 943919 + | IS4 orf TERM 1172 943930 - 943901 - f 89 -9.3 -4.59109 | overlap 943903 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACGGCACATTGTCG TERM 1173 943928 - 943903 - f 100 -16.3 -3.90762 | overlap 943901 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACGGCACATTGT ycaL 944055 - 944819 + | putative heat shock protein TERM 1174 944935 - 944955 + F 76 -8.9 -3.66784 | opp_overlap 944948, overlap 944948 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC TERM 1175 945311 - 945348 + G 81 -10.5 -3.57561 | opp_overlap 945277, overlap 945300 945289 AAGTCGCGGCATTCC CACGCGTTCGTGAAGCA TTAT TGCGTCGCCAACGCGCG TTTCGCGAATTACCA TERM 1176 945544 - 945532 - g 70 -6.9 -4.04806 | GCCGAGATCAAAGAA CGCGA CGA CCGCG ATCGTAACCGAGCGG TERM 1177 945652 - 945637 - g 70 -4 -4.68424 | gap 1, overlap 945646 945648 CAATTGATTGAAAAA GCGC-TA CAA TACGCGC GCCAGAAATTGGCTC cmk 944992 - 945675 + | cytidylate kinase TERM 1178 945960 - 945950 - g 88 -8.2 -4.63527 | overlap 945951 945952 TGAGCAGTTCAAAAA CGCC CAG GGCG AGCTGGAAATCCAGG rpsA 945786 - 947459 + | 30S ribosomal protein S1 TERM 1179 947470 - 947491 + F 87 -9.5 -4.29929 | overlap 947464 AGTAATTCTCTGACT CTTCGGGAT TTTT ATTCCGAAG TTTGTTGAGTTTACT TERM 1180 947568 - 947538 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 947545, overlap 947541 947545 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAGCAACAGCA TERM 1181 947566 - 947541 - f 93 -15.5 -2.84098 | opp_overlap 947545, overlap 947538 947545 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAGCAACAG TERM 1182 947562 - 947545 - f 90 -14.1 -3.30554 | opp_overlap 947545, overlap 947541 947538 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA TERM 1183 947545 - 947562 + F 86 -14.1 -3.18264 | opp_overlap 947545 947541 947538 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA ihfB 947619 - 947903 + | integration host factor subunit beta TERM 1184 947933 - 947947 + F 91 -7.8 -5.20154 | opp_overlap 947933, overlap 947925 TTGAACGCGAGAAAA GCACCT GTC GGGTGC TTTTTTCAATTCTCT TERM 1185 947947 - 947933 - f 77 -7.1 -4.42788 | opp_overlap 947933 947925 TTGAACGCGAGAAAA GCACC TGTCG GGTGC TTTTTTCAATTCTCT TERM 1186 949095 - 949121 + F 77 -3.6 -5.22312 | overlap 949098 949099 949116 CGCAAAGTTTATGGC TCTCTGCCGC TGCGGTC GCGGCACTGA TTTTTTGGTATCAGT TERM 1187 951248 - 951261 + G 77 -6.7 -4.44211 | GGATAACCTGACTGC CGGTA CGAT TACCG TTGTTTTCTCTTCAA msbA 950406 - 952154 + | lipid transporter ATP-binding/permease protein TERM 1188 952186 - 952205 + G 75 -11.4 -2.88677 | overlap 952188 TGGTGAATCCCCTTT GTGGCGGC TATT GCTGCCAC TCTCCTGGTTGTATG TERM 1189 952286 - 952262 - g 75 -5.5 -4.61873 | overlap 952267 TGCTATAAACTAAAA CTGAAGCGCGC CTG GCGTGCCCCCG TACCGGTTGTCGTGG TERM 1190 952557 - 952547 - g 70 -6.8 -4.09685 | TCTGATGCGGTAAAA GCCA TTC TGGC GCAACACCCTGATGT TERM 1191 952855 - 952879 + G 74 -2.9 -5.0133 | gap 2, overlap 952855 952856 ACATGTAGTGGCGAT G-GCGG-GGAT TGGGC ATCCGCCGCGC TTTTTTGCCACGCTG lpxK 952151 - 953137 + | tetraacyldisaccharide 4'-kinase TERM 1192 954072 - 954083 + G 74 -2.2 -5.10154 | gap 1, opp_overlap 954072 TCTGGGATCGCAAAC GC-GC AGA GCAGC TTTTTGATTTTAGCT TERM 1193 954132 - 954142 + G 70 -6.8 -4.00512 | opp_overlap 954131 954132 CCCCAGCGCCGAAAC GCCA GTA TGGC TATTTTGTTCTGCCA ycaQ 953174 - 954406 + | hypothetical protein ycaR 954458 - 954640 + | hypothetical protein kdsB 954637 - 955383 + | 3-deoxy-manno-octulosonate cytidylyltransferase SF0915 955537 - 956430 + | hypothetical protein ycbC 957186 - 956407 - | hypothetical protein TERM 1194 957868 - 957853 - g 100 -2.4 -5.93252 | overlap 957855 CCGAAAAAGAAAAAA CGGACG CTTT CGCCAG ATTATCCACGCGACC smtA 957322 - 958107 + | putative metallothionein SmtA TERM 1195 959274 - 959299 + G 81 -10.5 -3.58505 | gap 1, opp_overlap 959270, overlap 959242 959270 CTGTCACAGTATCCG CGTGC-ACGTCA CTT TGACGTTGCGCG TATTGTTATTGATCA mukF 958104 - 959426 + | condesin subunit F TERM 1196 959478 - 959493 + G 70 -10.4 -3.17075 | GAATCCGTTATTTCC GGCGCT GGAC AGCGCC TTACGTTCAGGCCGC mukE 959434 - 960111 + | condesin subunit E TERM 1197 961346 - 961300 - g 70 -6.5 -4.15565 | gap 1, opp_overlap 961292, overlap 961304 TGGACGAGCTGAAAA GCCAGCTTGCT-GACTACCAGC AGGC GCTGGACGTCCAGCAAACGCGC GCGATCCAGTATAAC TERM 1198 961498 - 961483 - g 81 -4.7 -5.10497 | AAGCGACTGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC TERM 1199 963505 - 963491 - g 72 -8.5 -3.82202 | opp_overlap 963502 CATGGTGAAAGATAA CGGCG TTGAG CGCCG CTTACACCGTCGTGA TERM 1200 963961 - 963925 - g 72 -11 -3.05844 | gap 1, overlap 963956 TTGGTCAGGTGAACA GCGTGCGTCTCAACG TGAACGTG CGT-GAAACGCACGC CATGCTGCTGGATGT mukB 960111 - 964571 + | cell division protein MukB TERM 1201 964599 - 964574 - f 73 -7.5 -4.1899 | opp_overlap 964578, overlap 964578 CCAGGCGAGTTAAAA TTAAGGCGGCA GCAA TGCCGCCTTTT CTTTTTCCGAAAACT TERM 1202 964578 - 964595 + F 100 -12.7 -5.26119 | opp_overlap 964578 964574 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1203 964595 - 964578 - f 93 -12.7 -3.69605 | opp_overlap 964578, overlap 964574 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1204 964726 - 964701 - f 72 -9.1 -3.61398 | opp_overlap 964701 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 1205 964701 - 964726 + F 100 -9.8 -5.61596 | opp_overlap 964701 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SF0921 964716 - 966062 + | IS4 orf TERM 1206 966073 - 966044 - f 89 -9.3 -4.59109 | overlap 966046 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACATAACGGCGC TERM 1207 966071 - 966046 - f 100 -16.3 -3.90762 | overlap 966044 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACATAACGGC ycbB 966270 - 968117 + | hypothetical protein ycbK 968298 - 968846 + | hypothetical protein TERM 1208 968979 - 968940 - g 76 -7.7 -4.15044 | gap 1, overlap 968941 TCTGGTGTGAACAAA CCCGCCTGGCCGCACTGG TCGAT CCTG-GCGGCGATGCGGA AAAAATCAAACAGGA ycbL 968873 - 969520 + | hypothetical protein TERM 1209 969705 - 969729 + T 70 -5 -4.42235 | gap 1, overlap 969700 969708 CGTTTGTCATCAGTC TCA-GCCCGCT TTTC AGCGGGCTTCA TTGTTTTTAACGCTT TERM 1210 969708 - 969725 + T 93 -12.7 -3.74868 | overlap 969705 969700 TTGTCATCAGTCTCA GCCCGCT TTTC AGCGGGC TTCATTGTTTTTAAC aspC 970933 - 969743 - | aromatic amino acid aminotransferase TERM 1211 971086 - 971071 - R 100 -9 -5.97575 | opp_overlap 971071 AAGGCATAAAAAAAA CAGGAC CAAC GTCCTG TTTTTTCGGCATTTA TERM 1212 971071 - 971086 + r 100 -9 -5.07107 | opp_overlap 971071 AAGGCATAAAAAAAA CAGGAC CAAC GTCCTG TTTTTTCGGCATTTA ompF 972206 - 971118 - | outer membrane protein F TERM 1213 971638 - 971658 + g 70 -4.7 -4.57569 | gap 1, opp_overlap 971623 971615 971638, overlap 971640 CCGTCGCCGTTAGAA CG-GCGTG CAGTGT CACGCTCG TTTTTACCCAGGTAC TERM 1214 972632 - 972656 + r 76 -2.1 -5.28176 | opp_overlap 972632 972636 CAGCTAAGAAAAAAC TAATCCGCAAT AAG AGTACGGGTTA TTTTTTGTGCGTAAA TERM 1215 972792 - 972773 - R 100 -13.6 -5.43621 | opp_overlap 972773 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT TERM 1216 972773 - 972792 + r 93 -13.6 -3.53091 | opp_overlap 972773 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT asnC 974207 - 972807 - | asparaginyl-tRNA synthetase TERM 1217 974367 - 974350 - R 100 -9.1 -5.22943 | opp_overlap 974347 ATTAAAGGTAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG pncB 975578 - 974376 - | nicotinate phosphoribosyltransferase TERM 1218 977888 - 977878 - g 72 -6.8 -4.19472 | GAAGATATTGCAAAA CGCA CTC TGCG TAATGCCTGCCTGCG TERM 1219 977983 - 977995 + G 78 -9.1 -3.86822 | overlap 977985 AACAATATGACCGAT GCGCT GGC AGCGC TTTCTGCGGCGGTTG TERM 1220 978389 - 978377 - g 70 -4.7 -4.47328 | overlap 978378 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAACAGTTGAAAGG pepN 975844 - 978459 + | aminopeptidase N TERM 1221 978510 - 978476 - T 76 -8.5 -4.18197 | opp_overlap 978484 978486, overlap 978477 ACTTTTGAGCCAAAA TGCCTGATGCGACGC TTGAC GCGTCTTATCAGGCC TACAACTCCGTTGAA TERM 1222 978509 - 978477 - T 78 -12 -3.10597 | opp_overlap 978484 978486, overlap 978476 CTTTTGAGCCAAAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAACTCCGTTGA ssuB 979433 - 978666 - | aliphatic sulfonates transport ATP-binding subunit SF0931 980083 - 979430 - | taurine transport system permease protein SF0932 980963 - 980058 - | insertion element IS2 transposase InsD SF0933 981286 - 980921 - | insertion sequence 2 OrfA protein ycbN 982714 - 981569 - | alkanesulfonate monooxygenase ycbO 983670 - 982711 - | alkanesulfonate transporter substrate-binding subunit TERM 1223 982755 - 982767 + g 74 -3.3 -5.00616 | GCTGCCAGATGCGCT GGCGA ATA TCGAC TTTTTTCGGCACCAG ycbP 984238 - 983663 - | NAD(P)H-dependent FMN reductase SF0937 984570 - 984157 - | hypothetical protein insA 984651 - 984926 + | IS1 ORF1 insB 985841 - 985446 - | IS1 ORF2 insA 986143 - 985868 - | IS1 ORF1 TERM 1224 987202 - 987192 - g 72 -5.4 -4.47217 | opp_overlap 987192 AACGATTAAGCAAAA TGGT TAC ACCA TTTACCAAACTTATG ycbS 986284 - 988884 + | putative outer membrane protein SF0942 988875 - 989858 + | fimbrial protein SF0943 989956 - 990498 + | putative fimbrial-like protein TERM 1225 990649 - 990678 + GF 88 -2.1 -5.52384 | gap 1, overlap 990650 TAGCAAGCAAATCAA TGTG-CAGTTAGGC GAT GTCTCGCTGACACG TTTTTTTCATGGGAA SF0944 990458 - 991021 + | putative fimbrial-like protein ycbF 990987 - 991724 + | hypotheical protein TERM 1226 992447 - 992434 - g 72 -5.3 -4.47707 | CGCGATTAAAAATAA GCAAA ATGA TTTGC AAGCGATGCACCATA pyrD 991835 - 992845 + | dihydroorotate dehydrogenase 2 ycbW 992983 - 993561 + | hypothetical protein SF0948 994667 - 993558 - | hypothetical protein TERM 1227 994148 - 994165 + g 75 -5.5 -4.62069 | opp_overlap 994139 994140 CGGAAACCACCAGAT TGGGGCG GAAT TGCTCCA TTTTTACACTGGCCG TERM 1228 996393 - 996377 - g 70 -3.7 -4.6902 | CCATAAGGGCAAAAA CCAGT ACCAGAA ACTGG GCGAGAAGGGCGAGT ycbY 994911 - 997019 + | 23S rRNA m(2)G2445 methyltransferase TERM 1229 998673 - 998661 - g 82 -2.6 -5.40072 | overlap 998669 CTGCGGTGAAAAAAA GCGA AGAAG CCGC CGCGCCAAAAGCAGA uup 997031 - 998938 + | ABC transporter ATPase component TERM 1230 999012 - 998984 - f 83 -8.9 -4.21936 | overlap 998985 CTGACAACGGTAAAA TTGCCTGATGAAC TGG GTTTATCAGGCAT GAAAACCAACACTTT TERM 1231 999011 - 998985 - f 81 -12.4 -3.1268 | overlap 998984 TGACAACGGTAAAAT TGCCTGATGAAC TGG GTTTATCAGGCA TGAAAACCAACACTT TERM 1232 999466 - 999482 + G 72 -4.3 -4.62069 | opp_overlap 999466 GGTCCGTTTAAAAGA GCAACTG GCA CGGGTGC TTTTTCAACTCAAAA TERM 1233 999568 - 999600 + G 71 -3.3 -4.84146 | overlap 999573 GATGGCTTACGGCAG CATTGGGGTAGGCAG CAG CTTTCTCCCCTGGTG TTTATTTTGTGTCCT pqiA 999068 - 1000321 + | paraquat-inducible protein A TERM 1234 1001116 - 1001130 + G 70 -4.3 -4.58424 | GGCAGCCAGTGGCAC CGAAA ACAGC TTTCG TTTTGTATGATGATC pqiB 1000326 - 1001966 + | paraquat-inducible protein B ymbA 1001963 - 1002526 + | hypothetical protein TERM 1235 1002549 - 1002575 + T 100 -10.8 -6.02919 | opp_overlap 1002549 GATTTGTAAATATAA CCGTCTCCGGTA TGT TGCCTGAGGCGG TTTTTTTGTTTCTAA TERM 1236 1002715 - 1002741 + T 72 -3 -5.07652 | overlap 1002716 1002717 CGCGGTATTGCTTAA CTGTGATTGC ACATTTA GTAATCACTG TTTTCTTTTCCACCA TERM 1237 1002964 - 1002994 + T 79 -8.2 -4.34345 | opp_overlap 1002967 1002971, overlap 1002966 1002971 ATTCTGTCTCTTTAA AAAGAAACCTCCGC ATT GCGGAGGTTTCGCC TTTTGATACTCTGTC TERM 1238 1002966 - 1002992 + T 90 -15.2 -2.51207 | opp_overlap 1002967 1002971, overlap 1002964 1002971 TCTGTCTCTTTAAAA AGAAACCTCCGC ATT GCGGAGGTTTCG CCTTTTGATACTCTG TERM 1239 1002991 - 1002967 - T 100 -18.7 -4.56597 | opp_overlap 1002966 1002964 1002971, overlap 1002971 CTGTCTCTTTAAAAA GAAACCTCCGC ATT GCGGAGGTTTC GCCTTTTGATACTCT TERM 1240 1002987 - 1002971 - T 100 -13.7 -4.85782 | opp_overlap 1002966 1002964 1002971, overlap 1002967 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA TERM 1241 1002971 - 1002987 + T 100 -13.7 -3.77484 | opp_overlap 1002971 1002967, overlap 1002966 1002964 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA fabA 1003537 - 1003019 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase SF0955 1005367 - 1003607 - | putative ATP-dependent protease ycbG 1005552 - 1005956 + | hypothetical protein TERM 1242 1006071 - 1006035 - T 95 -13.2 -3.794 | gap 1, opp_overlap 1006046, overlap 1006046 GTTCAATTTACTAAA GGCAAAAAAAACCCCGC AGCA GCGGGGTTTTTCT-ACC AGACGATAACTTAAG TERM 1243 1006046 - 1006061 + T 100 -11.8 -4.82901 | opp_overlap 1006035 1006046 TAAAGGCAAAAAAAA CCCCGC AGCA GCGGGG TTTTTCTACCAGACG TERM 1244 1006061 - 1006046 - T 100 -11.8 -5.89947 | opp_overlap 1006046, overlap 1006035 TAAAGGCAAAAAAAA CCCCGC AGCA GCGGGG TTTTTCTACCAGACG ompA 1007128 - 1006082 - | outer membrane protein A TERM 1245 1007396 - 1007384 - R 100 -4.7 -6.02914 | overlap 1007385 TTTACAGAAAAAAAA CGCGG AAA CCGCT TCAGACAAGCCTTCG TERM 1246 1007395 - 1007385 - R 79 -8.2 -4.20122 | overlap 1007384 TTACAGAAAAAAAAC GCGG AAA CCGC TTCAGACAAGCCTTC sulA 1007994 - 1007485 - | SOS cell division inhibitor SF0960 1008714 - 1009079 + | insertion sequence 2 OrfA protein SF0961 1009037 - 1009690 + | IS2 ORF2 SF0962 1011815 - 1009650 - | hypothetical protein TERM 1247 1010408 - 1010382 - G 77 -2.9 -5.16572 | gap 1, overlap 1010384 1010387 1010399 1010400 1010402 ACGGAAGGCAAAAAA GAGCACGCCGGT AATA ACCAGCA-GCAC CAGCTGCCCTTCCAG TERM 1248 1010550 - 1010539 - G 72 -4.4 -4.62441 | TGGCAGACAAACAAA CTTG TCAG CAAG ATCCAATACCCGTGA TERM 1249 1010960 - 1010935 - G 74 -8.3 -3.95554 | gap 1, overlap 1010937 TGACGCAACAAAATA CA-GCGTGACAG TTG CTGGCACGCCTG GCCCTGCATCGACAT TERM 1250 1010957 - 1010937 - G 78 -11.1 -3.55864 | overlap 1010935 ACGCAACAAAATACA GCGTGACAG TTG CTGGCACGC CTGGCCCTGCATCGA yccF 1012271 - 1011825 - | hypothetical protein TERM 1251 1011857 - 1011869 + g 71 -9.1 -3.52906 | overlap 1011854 GTGCATTGGCTTCAC GCGCA GCT TGCGC TGTTTCTACCGATAC TERM 1252 1012192 - 1012178 - G 75 -5 -4.74103 | GCGGTAAGGTAAAAA TCAGCA CAA TACTGA CCAGAGTCGCCAACA helD 1012394 - 1014448 + | DNA helicase IV TERM 1253 1014472 - 1014453 - T 100 -13.6 -4.24711 | opp_overlap 1014449 1014446 GAAAACCGTAAGAAA CAGGTGGC GTTT GCCACCTG TGCAATATTACTTCA mgsA 1014938 - 1014480 - | methylglyoxal synthase TERM 1254 1015024 - 1015011 - R 88 -8.1 -4.7889 | overlap 1015013 ATAAAGACCGAAAAA GCCTG CGCA CAGGC ACAAAAATCTCAGGA SF0966 1015696 - 1015034 - | hypothetical protein TERM 1255 1016047 - 1016029 - g 77 -8.8 -4.08064 | AAGTTGCCGGCAAAA CGCTGCTG GGC CAGCAGGG GTATGGCACGCTGGC SF0967 1015815 - 1016282 + | hypothetical protein TERM 1256 1016287 - 1016314 + T 100 -17.1 -4.1673 | opp_overlap 1016287 TGGCCAAATAAAAAA TCCCCGGAAGG CAAAAA CCTTCCGGGGA TTTGTTCAGGGATTA TERM 1257 1016314 - 1016287 - T 100 -17.8 -5.63517 | opp_overlap 1016287 TGGCCAAATAAAAAA TCCCCGGAAGGC AAAA ACCTTCCGGGGA TTTGTTCAGGGATTA yccV 1016695 - 1016327 - | hypothetical protein SF0970 1017892 - 1016702 - | putative oxidoreductase TERM 1258 1016817 - 1016838 + g 72 -5.9 -4.40358 | gap 1, opp_overlap 1016821, overlap 1016821 ACATCACGACCGGCA TCAATTGCGG CAT CCGCGAT-GA TTTTCTGAAATAAAT SF0969 1017987 - 1018265 + | hypothetical protein yccK 1018591 - 1018262 - | sulfurtransferase TusE TERM 1259 1018326 - 1018357 + g 91 -8 -5.06414 | TTAGCCGGGCCTTTC GGGAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCACCAAA TERM 1260 1018662 - 1018636 - R 100 -10.1 -5.46657 | CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTATG AAAGTGTTAGCGGGT yccA 1019341 - 1018682 - | hypothetical protein TERM 1261 1019123 - 1019136 + g 70 -5.2 -4.42386 | GGAGATAATCCCGGT CGGC TTATTC GCCG TTTTATAGGTCAGGA TERM 1262 1019510 - 1019542 + H 77 -9.2 -3.90744 | opp_overlap 1019515, overlap 1019515 TTCGACAGGCAAAAG AAAAAGGGGTTAGC ATTTA GCTAACCCCTTATC TTATTTGGCGGAAGC TERM 1263 1019537 - 1019515 - H 100 -13.5 -5.48213 | opp_overlap 1019515 1019510 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG TERM 1264 1019515 - 1019537 + H 95 -13.5 -3.90464 | opp_overlap 1019515, overlap 1019510 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG hyaA 1020061 - 1021179 + | hydrogenase-1 small subunit TERM 1265 1021364 - 1021385 + G 72 -10.1 -3.35371 | gap 1, overlap 1021384 CATCCTGCAAGGGCG CGACCCGCGC GAT GCGTGGG-CG TTCGTTGAACGTATC TERM 1266 1022387 - 1022373 - g 88 -11.4 -3.72893 | TACTCGTGGATCAAA GCGCCA CGC TGGCGC GGTAACGCGATGGAA hyaB 1021176 - 1022969 + | hydrogenase 1 large subunit hyaC 1022988 - 1023695 + | hydrogenase 1 b-type cytochrome subunit hyaD 1023692 - 1024279 + | hydrogenase 1 maturation protease hyaE 1024276 - 1024674 + | hydrogenase-1 operon protein HyaE TERM 1267 1025249 - 1025271 + GF 83 -6.2 -4.9792 | opp_overlap 1025250, overlap 1025250 TAATCTGACGCAATT ACCCATCAGC GAG GCTGATCGGC TTTTTCTCTCGCGTC TERM 1268 1025250 - 1025270 + GF 77 -9.7 -3.58029 | opp_overlap 1025250, overlap 1025249 AATCTGACGCAATTA CCCATCAGC GAG GCTGATCGG CTTTTTCTCTCGCGT hyaF 1024671 - 1025660 + | hydrogenase-1 operon protein hyaF TERM 1269 1025754 - 1025776 + GF 83 -6.2 -4.9792 | opp_overlap 1025755, overlap 1025755 TAATCTGACGCAATT ACCCATCAGC GAG GCTGATCGGC TTTTTCTCTCGCGTC TERM 1270 1025755 - 1025775 + GF 77 -9.7 -3.58029 | opp_overlap 1025755, overlap 1025754 AATCTGACGCAATTA CCCATCAGC GAG GCTGATCGG CTTTTTCTCTCGCGT SF0979 1025494 - 1026033 + | hydrogenase-1 operon protein TERM 1271 1026604 - 1026639 + G 70 -5.4 -4.34402 | gap 1, opp_overlap 1026604 ATTGTGGATATTGAA TGC-CAACGGTTGGATG CAA TACCCGACCGGTGCGCA TTTTGATATCGACAC TERM 1272 1026670 - 1026691 + G 78 -10.9 -3.54424 | opp_overlap 1026672 CCTGCGTATGGAGAT GACCAGCTT CAGC GAGCTGGTC TTTAACCCGGTCAGC TERM 1273 1027083 - 1027073 - g 77 -8.2 -4.0942 | CACTCATTAGATAAA CCCG TGC CGGG TCTGAAGAATTTGAT appC 1026167 - 1027711 + | third cytochrome oxidase, subunit I appB 1027723 - 1028859 + | third cytochrome oxidase, subunit II TERM 1274 1029005 - 1028972 - f 81 -13.1 -2.60988 | overlap 1028969 1028968 AAGTTAACGAACGTA GGCCTGATGCGGCGC ATTA GCATCGCATCAGGCA ATCAATAATGTTAGA TERM 1275 1029411 - 1029397 - g 77 -10 -3.65542 | overlap 1029395 CGTACCCGTAAAACA GGCGAA GCC TTCGCC GCCGGGCTGGCACCT appA 1029043 - 1030341 + | phosphoanhydride phosphorylase TERM 1276 1030376 - 1030353 - T 100 -14 -5.31456 | opp_overlap 1030358 GTAATGCATAAAAAA GAGCATTCAG TTAC CTGAATGCTC TGAGGCTGATGACAA TERM 1277 1030435 - 1030424 - T 71 -7.2 -4.16943 | opp_overlap 1030411 GCGTAGACCGGAAAA GGCG TTCA CGCC GCATCCGGTCACTTT SF0983 1032402 - 1030456 - | hypothetical protein TERM 1278 1031581 - 1031595 + g 72 -5.6 -4.56597 | overlap 1031583 GCGTTTGCGTTCTTG CTCCAG CGT CTGGCG TTTTTCCAGCAGCGC etp 1033088 - 1032642 - | phosphotyrosine-protein phosphatase TERM 1279 1032729 - 1032743 + g 70 -6.4 -4.1891 | opp_overlap 1032729, overlap 1032725 CTGACTTTTACGATA GGGATC CGG GATCTC TTTCTGTTCCAGCCA TERM 1280 1033034 - 1033015 - G 72 -11.4 -2.50816 | overlap 1033014 CGTTTACGCAGCAAG CGCTCGCC AATG GGCGAACG GCAAATGTTGCCGGT yccZ 1034215 - 1033076 - | exopolysaccharide export protein ymcA 1036357 - 1034261 - | hypothetical protein ymcB 1037103 - 1036357 - | hypothetical protein ymcC 1037744 - 1037100 - | putative regulator ymcD 1038174 - 1037851 - | hypothetical protein cspH 1038810 - 1038598 - | cold shock-like protein cspG 1039108 - 1039308 + | cold shock protein CspG TERM 1281 1039513 - 1039529 + G 100 -9.4 -5.4251 | opp_overlap 1039513 1039510 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCTGCC ymcE 1039482 - 1039712 + | cold shock gene yccL 1039702 - 1039875 + | hypothetical protein yccM 1040997 - 1039924 - | hypothetical protein TERM 1282 1040960 - 1040981 + g 100 -2.9 -5.71712 | gap 1, overlap 1040964 1040965 CCGCCCGTCGTGCCT GGCCGCCGCT GCC AGCGG-GTTC TTTTTTTCTCTGCCA TERM 1283 1040964 - 1040978 + g 80 -5.6 -4.92669 | overlap 1040960 1040965 CCGTCGTGCCTGGCC GCCGCT GCC AGCGGG TTCTTTTTTTCTCTG TERM 1284 1040965 - 1040977 + g 71 -9.1 -3.53161 | overlap 1040964 1040960 CGTCGTGCCTGGCCG CCGCT GCC AGCGG GTTCTTTTTTTCTCT SF0995 1043528 - 1041099 - | histidine protein kinase/phosphatase, aerobic respiration sensor-response protein, sensor for arcA TERM 1285 1041499 - 1041511 + g 76 -9.1 -3.76402 | AATAGTGAACTGGTA CGCTG GCG CAGCG TTTCGTCAATGACAT TERM 1286 1044781 - 1044808 + G 72 -5.6 -4.48987 | gap 1 CAATTACAGGGGCAA TCGGT-GTCTGAT AAT GTCAGCCCACCGA TTTTAGTTCTGACGC torT 1043893 - 1044921 + | periplasmic sensory protein associated with the TorRS two-component regulatory system torR 1045586 - 1044894 - | DNA-binding transcriptional regulator TorR torC 1045673 - 1046845 + | trimethylamine N-oxide reductase, cytochrome c-type subunit TERM 1287 1047207 - 1047218 + T 72 -5.8 -4.38712 | CGACACCTCCCAGCG CGGT GATA ACCG TTTTGTGCGCGTGAG TERM 1288 1047620 - 1047610 - T 74 -6.8 -4.21908 | overlap 1047617 TACGAGCAGCTAAAA GCGA AAG TCGC CGCCGGTGAAGTTGA TERM 1289 1049541 - 1049523 - T 86 -13.1 -3.36823 | opp_overlap 1049519, overlap 1049518 TTGCTGAAAAGCGAA CCGCCGC TCACT GCGGCGG TGAATGATCTGGAAA insB 1049983 - 1049588 - | IS1 ORF2 insA 1050285 - 1050010 - | IS1 ORF1 TERM 1290 1050649 - 1050628 - R 70 -2.2 -5.00616 | GTTTGCGGCAAAAAA CACTGACG GCGCTG CGGCAATG GTTACCAGAGTTTGC TERM 1291 1050794 - 1050780 - R 71 -7.1 -4.08216 | opp_overlap 1050769 1050768 1050771 1050770 TTATGCGCCTGAAAA GACGC GTTTA GCGTC GCATCAGGCATTATG TERM 1292 1050872 - 1050902 + r 83 -14 -2.73364 | opp_overlap 1050870 1050869, overlap 1050878 ATGAGCTACAAACCG GGAAAGCCGCTGGC GTA GCAGGCGGTTTTCC TGCTTCAGGTGCGCA yccD 1051156 - 1050851 - | chaperone-modulator protein CbpM TERM 1293 1050878 - 1050896 + g 78 -8 -4.3534 | opp_overlap 1050870 1050869, overlap 1050872 TACAAACCGGGAAAG CCGCTGGC GTA GCAGGCGG TTTTCCTGCTTCAGG cbpA 1052076 - 1051156 - | curved DNA-binding protein CbpA TERM 1294 1051276 - 1051290 + g 86 -6.4 -5.14563 | overlap 1051285 TTTCAGTACCGCATA CAGATC GCC GGTCTG TTTTTTGCTCACCAG TERM 1295 1051796 - 1051776 - G 72 -6.9 -4.18494 | CATGCTGACCGAAAA TTGACGAGA AGA TATCGTCAA AATCTTCGGCATTAA TERM 1296 1053268 - 1053258 - g 91 -5.4 -5.37345 | opp_overlap 1053258 TTGAATGACAAAAAA TGCA TAC TGCA TTTACCCGAGTTTAT yccE 1052337 - 1053593 + | hypothetical protein TERM 1297 1053737 - 1053765 + F 93 -10.3 -4.61633 | opp_overlap 1053739 GAGGCAGGGGCTAAT CAGGCATAGTTTG CGT CAAACCTTGCCTG TTTTTGAAGATGTAT TERM 1298 1054326 - 1054310 - g 87 -4.3 -5.19212 | ATCACCAGGAAAAAA TGGGCAC TAT GGACCCA ACCTTTAACCCGATG agp 1053886 - 1055127 + | glucose-1-phosphatase/inositol phosphatase TERM 1299 1055157 - 1055135 - T 100 -16.3 -4.84673 | opp_overlap 1055131 TGAAATAACAGAAAA CTCCCCCGC GAGAA GCGGGGGAG TCGCTGGTTAAACGT yccJ 1055392 - 1055165 - | hypothetical protein wrbA 1056009 - 1055413 - | TrpR binding protein WrbA TERM 1300 1056329 - 1056314 - R 76 -7.6 -4.19817 | opp_overlap 1056321 CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTAATTCT TERM 1301 1056545 - 1056562 + r 100 -14.1 -4.84918 | opp_overlap 1056542 GTCAAAAAGTCATCA CCGCCGG TAAC CCGGCGG TTTTCTGTTTATGGC ycdG 1057965 - 1056571 - | putative transport protein SF1010 1058378 - 1057920 - | hypothetical protein SF1011 1059015 - 1058425 - | hypothetical protein TERM 1302 1058584 - 1058573 - G 70 -7.2 -4.11216 | overlap 1058574 TGTTGACGGTCAAAA CCCG ACAT CGGG CCGGTATCCAGTCCC SF1012 1059825 - 1059025 - | putative acetyltransferase SF1013 1060219 - 1059833 - | hypothetical protein SF1014 1060965 - 1060231 - | putative synthetase TERM 1303 1060437 - 1060402 - GR 87 -4.6 -5.24531 | gap 1, opp_overlap 1060409, overlap 1060403 ATGCTCCAGAAAAAA GCCATCGCGTAGCGTCG ATT CGACGC-AGACGTTGGT AGCGATACCGGTGAA TERM 1304 1060436 - 1060403 - GR 72 -8.1 -3.73995 | gap 1, opp_overlap 1060409, overlap 1060402 TGCTCCAGAAAAAAG CCATCGCGTAGCGTCG ATT CGACGC-AGACGTTGG TAGCGATACCGGTGA SF1015 1062071 - 1060923 - | hypothetical protein TERM 1305 1062378 - 1062365 - g 82 -2.3 -5.45652 | overlap 1062351 AGCGCGAAGAAAAAA GCGAT TCTT AGCGC AGCACTGGACACTTT TERM 1306 1062770 - 1062725 - g 74 -8.3 -3.99405 | gap 1, opp_overlap 1062725 TTAATTGATGAGAAA TCGGCGC-TGATTGCCGGTT GGGTCAA AAGCGGCAAACTCGCGCCGA TTGATCCGCAGCATT ycdC 1062302 - 1062940 + | putative tet operon regulator TERM 1307 1062970 - 1062947 - T 74 -11 -2.85297 | opp_overlap 1062942 1062942 1062968, overlap 1062944 1062942 CCACGTTAAAGATGA CGGAGGAGGT TGTA ACATCCTCCG GCTACCTGTTTAACC TERM 1308 1063014 - 1062999 - T 83 -10.4 -3.73775 | opp_overlap 1063008 CCGATCGTCATTAAA CTGGCG TTAC CGCCAG CGGCAGCGGTATTCA SF1017 1064422 - 1063235 - | IS91 orf TERM 1309 1064010 - 1064025 + g 73 -9 -3.63805 | ATCCCCGGCTCCACA TCTGCC TGAT GGCAGA TTTCCAGTATCACAT TERM 1310 1064335 - 1064356 + g 70 -7.2 -4.06419 | opp_overlap 1064332 CTGATTCAATTACCA CCGGACGG ACTGCC CCTTCCGG TTGTTTCTCCAGCCA SF1018 1064844 - 1064422 - | putative IS91 ORF2 TERM 1311 1064666 - 1064680 + g 74 -10 -3.44284 | opp_overlap 1064665 1064666, overlap 1064665 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA SF1019 1064943 - 1065551 + | putative cytochrome TERM 1312 1066561 - 1066542 - g 72 -5 -4.6902 | opp_overlap 1066556 CCACAACTGCAAAAA GCCAAC CCGGAACT GTTGGC AAAAGTCGATGCCAA ycdO 1065609 - 1066736 + | hypothetical protein TERM 1313 1066785 - 1066762 - g 90 -9.6 -4.53036 | opp_overlap 1066760 1066776, overlap 1066776 GTATAAAGATGAAAA CGGCGTGA ATGAACCG TCACGCCG ACGTTTACTGAAAGG TERM 1314 1066858 - 1066848 - g 82 -3.2 -5.28176 | overlap 1066854 CTCATGCACAAAAAA CGCA AAG TGCA CCGGGCACGCTTTCA ycdB 1066742 - 1068007 + | hypothetical protein TERM 1315 1068563 - 1068580 + G 70 -10.5 -2.80816 | opp_overlap 1068563 1068562 GTTCGTGCGCATAAT CGCGCTG CCAA CGGCGCG TGTGATGAATACAAA SF1022 1068479 - 1069402 + | hypothetical protein TERM 1316 1069417 - 1069441 + T 100 -13.6 -4.33907 | overlap 1069421 AGTGTATTATCGGTG CAGAGCCCGG GCGAA CCGGGCTTTG TTTTGGGTGTTTATG TERM 1317 1069421 - 1069437 + T 93 -10.8 -4.71418 | overlap 1069417 TATTATCGGTGCAGA GCCCGG GCGAA CCGGGC TTTGTTTTGGGTGTT SF1023 1070378 - 1069512 - | IS3 ORF2 TERM 1318 1070101 - 1070128 + g 75 -4.7 -4.74103 | overlap 1070076 1070076 GCCTTTGCCCTCAGT CCCTGACGGCG CAGGCT TGCCGCCACGG TTTTTACGTTAAAGG SF1024 1070683 - 1070375 - | IS3 ORF1 ycdU 1071266 - 1072252 + | hypothetical protein TERM 1319 1072431 - 1072412 - f 100 -7.8 -5.92337 | opp_overlap 1072412 1072410 ATATACGAAAAAAAA GCCCGTAC TTTC GTACGCGC TCTTCTTTAAATATG TERM 1320 1072746 - 1072728 - f 72 -8.9 -3.58184 | AGATCATAACGATAA GTGCGAA TAAAT TTCGCAC AACGCTTTTCGGGAG TERM 1321 1074052 - 1074069 + G 72 -5.5 -4.57073 | TGGATCTGATTATTG CCGGTTT TCAT GAGCCGG TTTTTGCGCCACATG ycdX 1073760 - 1074497 + | putative hydrolase ycdY 1074521 - 1075075 + | putative oxidoreductase component TERM 1322 1075614 - 1075596 - g 71 -2.2 -4.88407 | overlap 1075598 TTACGCAATGAAAAA CAGCGGCC TGT GGCTGGCG GCGCGTAGTGCAAAG ycdZ 1075147 - 1075668 + | hypothetical protein TERM 1323 1075685 - 1075659 - T 100 -9.5 -5.01811 | opp_overlap 1075663, overlap 1075663 GCAGGAAATCAAAAA TAAAGCGTGAG GGGCA CTCACGCTTTC GCTTAAACAGTAAAT TERM 1324 1075663 - 1075681 + T 83 -10.3 -3.75332 | opp_overlap 1075663 1075659 GAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1325 1075681 - 1075663 - T 100 -10.3 -5.00388 | opp_overlap 1075663, overlap 1075659 GAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1326 1075700 - 1075721 + T 91 -8.7 -5.03994 | opp_overlap 1075700 CGCTTAAACAGTAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTGTCAGG TERM 1327 1075721 - 1075700 - T 74 -8.7 -4.00532 | opp_overlap 1075700 CGCTTAAACAGTAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTGTCAGG TERM 1328 1076202 - 1076215 + T 73 -4.5 -4.77165 | opp_overlap 1076202, overlap 1076203 GGATTCGGTTATTAA TGGCA ACCG TGCCG TTTTCTTGTGCCGCA TERM 1329 1076400 - 1076357 - T 93 -11.8 -3.70902 | opp_overlap 1076361, overlap 1076361 TGTTGTATACCGAAA CAAAGATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATCTTTG TAGCTCTGAGCACGA TERM 1330 1076396 - 1076361 - T 77 -6.8 -4.48299 | opp_overlap 1076361, overlap 1076357 GTATACCGAAACAAA GATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATC TTTGTAGCTCTGAGC SF1032 1077980 - 1076772 - | iso-IS10R ORF csgE 1078702 - 1078313 - | curli assembly protein CsgE csgD 1079357 - 1078707 - | DNA-binding transcriptional regulator CsgD TERM 1331 1079100 - 1079121 + g 93 -8.9 -4.77036 | opp_overlap 1079103 TTCAGGCGTATTTAG CAACAATAT TTTG ATATTGTTG TTTTTCCTGCTCAAA TERM 1332 1079742 - 1079763 + H 82 -3 -5.52384 | AAACGTTTTTGTTTT TTCTCCAC ACCTCC GTGGACAA TTTTTTTACTGCAAA csgB 1080111 - 1080566 + | curlin minor subunit SF1037 1080780 - 1081082 + | IS600 ORF1 SF1038 1081118 - 1081861 + | IS600 ORF2 TERM 1333 1082245 - 1082230 - f 87 -10.4 -4.08706 | opp_overlap 1082230 TTTGTATTACAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA TERM 1334 1082230 - 1082245 + F 100 -10.4 -5.75342 | opp_overlap 1082230 TTTGTATTACAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA csgC 1082266 - 1082598 + | putative autoagglutination protein SF1040 1082719 - 1083030 + | hypothetical protein SF1041 1083125 - 1083658 + | hypothetical protein TERM 1335 1084301 - 1084324 + GT 75 -9.7 -3.53811 | opp_overlap 1084304, overlap 1084289 1084304 ACCCGCCTCCTGGCA TAACGATGC CATGAC GCATCGTTA TTTACGCAAAATGGA TERM 1336 1085037 - 1085007 - gT 100 -11.8 -5.03314 | opp_overlap 1085010, overlap 1084991 1085010 GTTATTCTCAAAAAA GAACCCGCCACCAG TTT CTGGAAGCGGGTTA TGGTCAGACTGGCGT TERM 1337 1085010 - 1085034 + GT 80 -11.3 -3.41051 | opp_overlap 1084991 1085007 1085010 ATTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG TERM 1338 1085034 - 1085010 - gT 100 -13.5 -4.62085 | opp_overlap 1085010, overlap 1084991 1085007 ATTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG ymdC 1083600 - 1085081 + | putative synthase mdoC 1086246 - 1085089 - | glucans biosynthesis protein TERM 1339 1085726 - 1085703 - G 100 -3.2 -5.64274 | gap 1, overlap 1085706 1085707 CGAGGCATAAAAAAA TCACCGATAGT TTT ACCATCGA-GA ATTTTTTATTCGTTT TERM 1340 1087084 - 1087074 - g 88 -5.4 -5.22289 | CAGCAAAGATAAAAA CGAT GAA ATCG TCAGCATGCTCGGGG mdoG 1086640 - 1088175 + | glucan biosynthesis protein G mdoH 1088168 - 1090711 + | glucosyltransferase MdoH TERM 1341 1090859 - 1090842 - T 73 -2 -5.11063 | gap 1, opp_overlap 1090844, overlap 1090831 1090844 1090845 ACGAGCCAATAAAAA TACCGGC GTTAT GCCG-TA ATGCCAGTCAGTTAA TERM 1342 1090860 - 1090889 + T 89 -9.3 -4.59109 | opp_overlap 1090844, overlap 1090844 1090862 CGGCGTTATGCCGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1343 1090862 - 1090887 + T 100 -16.3 -3.90762 | opp_overlap 1090844, overlap 1090844 1090860 GCGTTATGCCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SF1046 1092314 - 1091127 - | IS91 orf TERM 1344 1091902 - 1091917 + g 73 -9 -3.63805 | ATCCCCGGCTCCACA TCTGCC TGAT GGCAGA TTTCCAGTATCACAT TERM 1345 1092227 - 1092248 + g 70 -7.2 -4.06419 | opp_overlap 1092224 CTGATTCAATTACCA CCGGACGG ACTGCC CCTTCCGG TTGTTTCTCCAGCCA SF1048 1092736 - 1092314 - | putative IS91 ORF2 TERM 1346 1092572 - 1092558 - GH 70 -10 -2.95111 | opp_overlap 1092558 1092557, overlap 1092557 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA TERM 1347 1092558 - 1092572 + gH 74 -10 -3.44284 | opp_overlap 1092557 1092558, overlap 1092557 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA TERM 1348 1093032 - 1093043 + Gr 72 -4.4 -4.61231 | CTCTAGGCATTCAAG GTTC TGAA GAAC TTTTTAGAAATATGA SF1047 1092698 - 1094038 + | hypothetical protein TERM 1349 1094215 - 1094225 + Tr 72 -5.4 -4.50159 | GCAACTGTTAGACCG GATG CAC CATC TTTCTTTAGCTTCAA SF1049 1095079 - 1094411 - | IS629 ORF2 SF1050 1095620 - 1095294 - | IS629 ORF1 SF1051 1096016 - 1096354 + | IS911 ORF1 TERM 1350 1096460 - 1096440 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 1351 1096812 - 1096801 - g 77 -5.8 -4.63218 | opp_overlap 1096806 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SF1052 1096381 - 1097220 + | IS911 ORF2 SF1053 1097729 - 1097226 - | hypothetical protein SF1054 1097793 - 1098158 + | insertion sequence 2 OrfA protein SF1055 1098116 - 1099021 + | insertion element IS2 transposase InsD SF1056 1099417 - 1099743 + | IS629 ORF1 TERM 1352 1100059 - 1100047 - g 70 -4.8 -4.56597 | overlap 1100049 TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCGGCCGGAAAGCC SF1057 1099958 - 1100626 + | IS629 ORF2 SF1058 1100914 - 1101216 + | IS600 ORF1 SF1059 1101252 - 1102070 + | IS600 ORF2 SF1060 1103027 - 1102095 - | hypothetical protein htrB 1104340 - 1103420 - | lipid A biosynthesis lauroyl acyltransferase TERM 1353 1103808 - 1103818 + g 70 -5.4 -4.41348 | TTTAAATCTTTGCGG TCGA GCA TCGA TTTATTTGAGCGCAA TERM 1354 1104159 - 1104181 + g 72 -8.4 -3.73224 | CACAGTTCCAGGTTG CGATGCACAA TTT TTGCGCGTCG TTTCATAAAACGTAA TERM 1355 1104620 - 1104607 - g 70 -6.7 -4.10429 | overlap 1104615 AACGACGCGTTAAAA GCCAA AATG TTGGC TGAGAGCGAACCGCG TERM 1356 1105268 - 1105292 + G 70 -4.1 -4.63218 | opp_overlap 1105257 1105255 AATACGCCCGTAAGG CGCGCGAGCAG GGC TTGCCGGTGCG TTTTATTGGCAAAAA yceA 1104565 - 1105617 + | hypothetical protein TERM 1357 1105653 - 1105619 - T 72 -5.7 -4.46675 | opp_overlap 1105622 1105623, overlap 1105621 1105624 ATCCAACAGAATAAA TATCATTGCCGGATG CGTGC CATCCGGCAACATTT CACTCTTACTTCTGC TERM 1358 1105651 - 1105621 - T 72 -8.3 -3.83144 | opp_overlap 1105622 1105623, overlap 1105619 1105624 CCAACAGAATAAATA TCATTGCCGGATG CGTGC CATCCGGCAACAT TTCACTCTTACTTCT TERM 1359 1105623 - 1105649 + T 74 -10.9 -2.86618 | opp_overlap 1105621 1105619 1105624, overlap 1105622 AACAGAATAAATATC ATTGCCGGATG CGTGC CATCCGGCAAC ATTTCACTCTTACTT TERM 1360 1105648 - 1105624 - T 88 -14.4 -2.9735 | opp_overlap 1105623 1105622, overlap 1105621 1105619 ACAGAATAAATATCA TTGCCGGATG CGTGC CATCCGGCAA CATTTCACTCTTACT yceI 1106234 - 1105659 - | hypothetical protein TERM 1361 1105963 - 1105951 - G 70 -5.5 -4.42386 | GTGGTATTGAGAAAA TCCGC ACT GCGAA GATGTTTATCGCGTT SF1064 1106804 - 1106238 - | putative cytochrome TERM 1362 1106406 - 1106371 - G 77 -6 -4.66609 | gap 1, overlap 1106372 CACGCGAGCCAAAAA TGCAGG-GCACCGGCAA AGT CTGCCTGTGCGCCAGCG TCGGCAAGGGTCGCG yceO 1107178 - 1107065 - | hypothetical protein TERM 1363 1107137 - 1107127 - G 75 -5.4 -4.62163 | AGAGAAAAAGATAAA GCAT CAG ATGC TCGCGAATATTATTG TERM 1364 1107216 - 1107197 - R 93 -10.7 -4.57837 | opp_overlap 1107202 ATACTCCTGTAAAAA CGGCCTC ATTCTG GAGGCCG TAATGATGATTATTG solA 1108344 - 1107226 - | N-methyltryptophan oxidase TERM 1365 1108329 - 1108343 + g 100 -3.6 -5.76633 | CGCTGCCAATAATGA TGAGAT CGT ATTTCA TTTTTTTCTCTCTGC TERM 1366 1108434 - 1108418 - R 76 -9.4 -3.74347 | opp_overlap 1108418, overlap 1108412 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT TERM 1367 1108418 - 1108434 + r 83 -9.4 -4.20084 | opp_overlap 1108412 1108418 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT TERM 1368 1108981 - 1108966 - R 100 -7.5 -5.85244 | AAGTAAAATAAAAAA GCCGG GGCGAT CCGGC AAAAACAAAAATCAC dinI 1109248 - 1109003 - | DNA damage-inducible protein I pyrC 1110368 - 1109322 - | dihydroorotase TERM 1369 1110467 - 1110452 - R 100 -11.8 -4.91852 | opp_overlap 1110449 TGCACGAAAAATAAA GGGCGC GAAT GCGCCC TCGTCATTAATCCGT yceB 1111034 - 1110474 - | hypothetical protein TERM 1370 1111165 - 1111119 - R 83 -4.3 -5.31275 | gap 1, overlap 1111126 1111128 CGCCAGCAGAAAAAA CTGA-AAACGGCGGCAACCCGC GAAT ACAGGCTGCCGCGGCGGGTCAG GATTAAATCGCCATT TERM 1371 1111157 - 1111126 - R 100 -12.2 -4.55016 | overlap 1111119 1111128 AGAAAAAACTGAAAA CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG CGGGTCAGGATTAAA TERM 1372 1111155 - 1111128 - R 80 -13.4 -2.56715 | overlap 1111126 1111119 AAAAAACTGAAAACG GCGGCAACCCGC GAAT ACAGGCTGCCGC GGCGGGTCAGGATTA grxB 1111815 - 1111168 - | glutaredoxin 2 yceL 1113087 - 1111879 - | multidrug resistance protein MdtH TERM 1373 1111904 - 1111914 + g 74 -8.2 -3.92373 | opp_overlap 1111901 1111904, overlap 1111883 CGTTCCAGCAAACGA CGCG CGG CGCG TTTCTGACTAAACTG TERM 1374 1112590 - 1112574 - G 79 -3.5 -5.03227 | overlap 1112576 ATAGCACAAACAAAA CGGCCCC TGT GGCGCAG ACCAGGCGAAAGTCG TERM 1375 1112703 - 1112684 - G 87 -4.9 -5.30686 | opp_overlap 1112684 AACAGCGAGAAAAAA CGACCAC GTTGTT GTGGACG GATTAGTTTCACCAC TERM 1376 1113170 - 1113200 + H 71 -3.4 -4.8667 | overlap 1113171 1113189 CTTCGGGGACAGTAT TTTTTTATCAAAAC GTC GCTTTGATAGAGAG TTTTTATCAAATATG TERM 1377 1113588 - 1113600 + G 84 -7.7 -4.67556 | opp_overlap 1113588 ACGAAAAAGAGATTA TTGGC GTT GCCAA TTTTTCCAATGTTGT rimJ 1113323 - 1113907 + | ribosomal-protein-S5-alanine N-acetyltransferase yceH 1113918 - 1114565 + | hypothetical protein mviM 1114567 - 1115400 + | putative virulence factor TERM 1378 1115553 - 1115569 + F 100 -13.7 -4.11692 | ATTCGCCTCTTTCAG CGCCTGC CTT GCAGGCG TTTTGCCCGTGGGTC mviN 1115600 - 1117135 + | putative virulence factor TERM 1379 1117171 - 1117140 - T 72 -10.2 -2.77344 | gap 1, opp_overlap 1117139 1117142, overlap 1117139 1117143 GGACGGTGTAACAAT GCAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TATTCAGATCGAAAT TERM 1380 1117142 - 1117168 + T 86 -14.4 -2.75074 | opp_overlap 1117139 1117140 1117143, overlap 1117139 ACGGTGTAACAATGC ATTCCGGCCTGC AGT GCAGGCCGGAGA TAATATTCAGATCGA TERM 1381 1117167 - 1117143 - T 90 -15.7 -2.6563 | opp_overlap 1117142 1117139, overlap 1117139 1117140 CGGTGTAACAATGCA TTCCGGCCTGC AGT GCAGGCCGGAG ATAATATTCAGATCG flgN 1117591 - 1117175 - | flagella synthesis protein FlgN flgM 1117889 - 1117596 - | anti-sigma28 factor FlgM TERM 1382 1117633 - 1117660 + g 73 -4 -4.86621 | overlap 1117634 1117637 TGCGCTTCGTTGATC AGCGCATCGGCA ATTT TGCCGGTGTCCA TTTTTAGTTCACCGT flgA 1118624 - 1117965 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1383 1118838 - 1118820 - g 72 -10.2 -3.38991 | overlap 1118818 ACGTTTTCAACAAGA GGCGCTCA ATC TGCGCGCC CAGCGTCAGGAAGTG flgB 1118779 - 1119195 + | flagellar basal body rod protein FlgB TERM 1384 1119225 - 1119237 + F 73 -10.5 -3.05816 | GAATATTTTTGATAT CGCCG GGT CGGCG TTAACTGCCCAGTCC TERM 1385 1119438 - 1119423 - f 71 -7.6 -3.86015 | opp_overlap 1119414 CAGGCCCCGGACAAA CTGGTT TATG AACCAG GTAATCCGCTGGCAG TERM 1386 1120061 - 1120042 - f 82 -7.1 -4.88736 | opp_overlap 1120042 CATCACCGATAAAAA TGGCGCG GTTGTG CGCACCA TTGATATTGGTGAAC TERM 1387 1121268 - 1121256 - g 70 -5.5 -4.32951 | opp_overlap 1121260 1121261, overlap 1121261 ATTCCAACGAACAAA CCCAA CTG CTGGG GCAGATTGTACTGGC flgE 1120334 - 1121542 + | flagellar hook protein FlgE TERM 1388 1121632 - 1121616 - f 70 -9.3 -3.35371 | opp_overlap 1121616, overlap 1121618 CAGACGCTGAATCAA CAGGCGG TAA CCGCCAG TAATCTGGCCAATGC TERM 1389 1121630 - 1121618 - f 74 -10.5 -3.24329 | opp_overlap 1121616, overlap 1121616 GACGCTGAATCAACA GGCGG TAA CCGCC AGTAATCTGGCCAAT flgG 1122451 - 1123233 + | flagellar basal body rod protein FlgG TERM 1390 1123241 - 1123259 + F 74 -8.1 -3.96337 | opp_overlap 1123241 AACTCTAAGGCATAA CCGGTGG CAGGT TCACCGG TTTACTGATTTTTGA flgH 1123286 - 1123984 + | flagellar basal body L-ring protein flgI 1123996 - 1125093 + | flagellar basal body P-ring protein flgJ 1125093 - 1126034 + | peptidoglycan hydrolase TERM 1391 1126366 - 1126344 - T 76 -9.1 -3.70902 | overlap 1126345 1126347 CTGCGCAGACGCAAA GTAGCGGGC TGACC GCCCGCTAT GAGCAGATGTCGAAA TERM 1392 1126365 - 1126345 - T 79 -12.6 -2.82327 | overlap 1126344 1126347 TGCGCAGACGCAAAG TAGCGGGC TGACC GCCCGCTA TGAGCAGATGTCGAA TERM 1393 1126363 - 1126347 - T 73 -10.8 -2.95942 | overlap 1126345 1126344 CGCAGACGCAAAGTA GCGGGC TGACC GCCCGC TATGAGCAGATGTCG TERM 1394 1126493 - 1126477 - T 75 -11.5 -3.06737 | opp_overlap 1126486, overlap 1126468 GAGTAACGCGGAAGA CCCGGCG GCG CGCCAGG CGCTGATTGGGAAAT TERM 1395 1128738 - 1128766 + T 100 -16 -5.85178 | overlap 1128763 TGGGTATGTTTTGTC TGCCCGCTCTGG GATCG CCGGGGCGGGCA TTTTTTTTGCCTATT TERM 1396 1128871 - 1128852 - T 100 -11.4 -5.69793 | opp_overlap 1128852 1128848 1128844 ACATGAAATAAAAAA GCCCTGGC AGTT ACCAGGGC TTGATTACTTTGAGC TERM 1397 1128852 - 1128871 + T 79 -10.7 -3.5013 | opp_overlap 1128852, overlap 1128848 1128844 ACATGAAATAAAAAA GCCCTGG CAGTTA CCAGGGC TTGATTACTTTGAGC rne 1132084 - 1128893 - | ribonuclease E TERM 1398 1130479 - 1130506 + g 73 -9.2 -3.61894 | gap 1 GCGCTGGCGGTACAT CCGGCA-TGGCAA AGG TTGCCAGTGCAGG TTGTTCAGGACGCTT TERM 1399 1131482 - 1131496 + g 88 -5.6 -5.18357 | CAGGAACGGAGCCGG GCGGCT TTC AGCGGC TTTTTTGATGGCTTC SF1089 1132165 - 1132539 + | hypothetical protein yceC 1132657 - 1133616 + | 23S rRNA pseudouridylate synthase C TERM 1400 1133687 - 1133640 - T 76 -11.8 -2.60219 | opp_overlap 1133648 1133649, overlap 1133639 1133658 1133659 TATAAGCCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCTGCAC CGATTGCCGGATGCG TERM 1401 1133713 - 1133658 - T 74 -10.3 -3.28712 | opp_overlap 1133649 1133648, overlap 1133640 1133639 1133659 CGGTTGGCCTGATAA GGCGTTTACGCCGCATCAGGCCGCC TGCACC GATTGCCGGATGCGACGTAACCGCA TCCGGCGCAAACAAC TERM 1402 1133712 - 1133659 - T 83 -13.8 -2.57132 | opp_overlap 1133649 1133648, overlap 1133640 1133639 1133658 GGTTGGCCTGATAAG GCGTTTACGCCGCATCAGGCCGCC TGCACC GATTGCCGGATGCGACGTAACCGC ATCCGGCGCAAACAA maf 1134312 - 1133728 - | Maf-like protein TERM 1403 1134424 - 1134413 - H 71 -3.6 -4.78077 | overlap 1134414 1134417 CTGAACGAAAATAAA GCAG TAAC CCGC AATGTGTGCGAATTA TERM 1404 1134443 - 1134471 + H 83 -10.3 -3.74077 | opp_overlap 1134449, overlap 1134449 GTGTGCGAATTATTG GCAAAAGGCAACC ACA GGCTGCCTTTTTC TTTGACTCTATGACG TERM 1405 1134465 - 1134449 - H 83 -10.1 -4.12902 | opp_overlap 1134443 1134449 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT TERM 1406 1134449 - 1134465 + H 95 -7.9 -5.31519 | opp_overlap 1134449, overlap 1134443 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT yceD 1134511 - 1135032 + | hypothetical protein rpmF 1135084 - 1135257 + | 50S ribosomal protein L32 TERM 1407 1135273 - 1135258 - f 70 -9 -3.34895 | opp_overlap 1135244 GTCATCGCTAAGTAA TCACGC GTCT GCGTGA TGAAGCTTAGTGAGG TERM 1408 1135394 - 1135423 + G 78 -10.7 -3.51032 | overlap 1135395 1135398 TTTTGGCCCTTCCGT GACAGTGCCTGCA GCAT TGCAGGCACTGAA TTCTAATTCGCAACT TERM 1409 1135395 - 1135422 + G 85 -14.2 -2.70298 | overlap 1135394 1135398 TTTGGCCCTTCCGTG ACAGTGCCTGCA GCAT TGCAGGCACTGA ATTCTAATTCGCAAC TERM 1410 1135398 - 1135419 + G 90 -14.5 -2.63347 | overlap 1135395 1135394 GGCCCTTCCGTGACA GTGCCTGCA GCAT TGCAGGCAC TGAATTCTAATTCGC plsX 1135338 - 1136408 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 1136476 - 1137429 + | 3-oxoacyl-(acyl carrier protein) synthase III fabD 1137445 - 1138374 + | acyl carrier protein S-malonyltransferase TERM 1411 1138426 - 1138406 - g 90 -7.5 -4.86621 | overlap 1138408 ATTTTGAAGGAAAAA TCGCACTGG TAA CCGGTGCAA GCCGCGGAATTGGCC fabG 1138387 - 1139121 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1139332 - 1139568 + | acyl carrier protein TERM 1412 1139571 - 1139609 + F 80 -6.7 -4.84359 | gap 1, opp_overlap 1139519 1139574 1139576, overlap 1139577 1139580 CCACCAGGCGTAAGT GAACATCTCCAGGCGGTC GTTC GACCGCCTG-AGTTTATC TTTTTGTCCCACTAG TERM 1413 1139604 - 1139576 - f 71 -9.6 -3.15056 | gap 1, opp_overlap 1139571 1139577 1139580, overlap 1139574 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTATCTTTTTGTCCC TERM 1414 1139577 - 1139603 + F 100 -13.1 -4.60808 | gap 1, opp_overlap 1139576 1139574, overlap 1139571 1139580 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTATCTTTTTGTCC TERM 1415 1139580 - 1139601 + F 90 -15.9 -2.59288 | opp_overlap 1139576 1139574, overlap 1139577 1139571 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTATCTTTTTGT TERM 1416 1140027 - 1140007 - g 70 -3.9 -4.68384 | overlap 1140012 ACTGATCGAAGAAAA CCACACATC TCT GATGAACGG TGGTCCACGTAAGAT TERM 1417 1140323 - 1140298 - g 74 -10.3 -3.51329 | TACCCGCAATGATAA CCCGCAAGCGG CGAG CCGCCCGTGGG ATAAAGAGCGTGATG fabF 1139654 - 1140895 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1418 1140921 - 1140936 + F 100 -8.2 -5.52096 | opp_overlap 1140921 TCCACCCATATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT TERM 1419 1140936 - 1140921 - f 72 -6 -4.55287 | opp_overlap 1140921 TCCACCCATATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT pabC 1141015 - 1141824 + | 4-amino-4-deoxychorismate lyase yceG 1141827 - 1142849 + | hypothetical protein TERM 1420 1143298 - 1143283 - g 91 -11.8 -4.08692 | GAAGTTGGCTTAAAA CGCGCG CGTG CGCGCG GCGAGCTGGATCGTA tdk 1142839 - 1143480 + | thymidylate kinase TERM 1421 1143526 - 1143516 - g 81 -6.8 -4.59773 | CCTGATTTCGAAAAA CTGG TAG CCAG CTATCAGGCCGGAAG TERM 1422 1143882 - 1143896 + G 71 -2.8 -4.7497 | opp_overlap 1143892 ACGCTTGAAGAGCCA CCAG CAGAAAC CTGG TTTTTCCTGGCTACC TERM 1423 1144058 - 1144085 + G 72 -7.7 -3.90922 | gap 1 CGCATTGCGCTTAAG CGCCGGT-TCGC CTGGC GCGGCACTGGCG TTGTTTCAGGGAGAT TERM 1424 1144260 - 1144248 - g 81 -9.1 -4.09864 | ATGGATGCGCTAAAA CGCCA TCA TGGCG CTGCGCAGGTGACCA holB 1143477 - 1144481 + | DNA polymerase III subunit delta' ycfH 1144492 - 1145289 + | putative metallodependent hydrolase TERM 1425 1145361 - 1145334 - f 74 -8.4 -3.93057 | opp_overlap 1145352 1145353, overlap 1145335 GCTAAAACGAGTAAA GTTCACCGCCGA AAAT TGGGCGGTGAAT AACCGCGTTTGAAAT TERM 1426 1145360 - 1145335 - f 78 -11.9 -2.95111 | opp_overlap 1145352 1145353, overlap 1145334 CTAAAACGAGTAAAG TTCACCGCCGA AAAT TGGGCGGTGAA TAACCGCGTTTGAAA TERM 1427 1146429 - 1146412 - g 70 -4 -4.61566 | opp_overlap 1146410 1146412 TGCTAAACCAGAAAA CCGCGC GAAAGT GGGCGG TATTATGATCTCCGC ptsG 1145585 - 1147018 + | glucose-specific PTS system IIBC components TERM 1428 1147060 - 1147043 - f 81 -12.7 -3.25823 | opp_overlap 1147043 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT TERM 1429 1147043 - 1147060 + F 100 -12.7 -5.04987 | opp_overlap 1147043 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT TERM 1430 1147773 - 1147798 + F 76 -4.7 -4.88736 | gap 1, opp_overlap 1147771 1147773 CATTGATGTCAAACA CCAGACCAGCGT AAG GCG-TGGTGTGG TTTTTCTCCATGCTG TERM 1431 1149826 - 1149816 - g 75 -5.4 -4.59773 | CCGTAGCGGCAAAAA TTGC TGA GCAA GAAGGTATTGCCGAA ycfF 1149602 - 1149961 + | purine nucleoside phosphoramidase ycfL 1149964 - 1150341 + | hypothetical protein ycfM 1150353 - 1150937 + | hypothetical protein TERM 1432 1151006 - 1151027 + G 91 -9.4 -4.58685 | CAATAATCCCATCAC GCGCGACG AATTGC TGTCGCGC TTTTTCCCGCAGTTT thiK 1150977 - 1151801 + | thiamine kinase TERM 1433 1152706 - 1152716 + G 70 -6.8 -4.08706 | opp_overlap 1152706 CCGATCAAGGCAGAA CGTG TTA CACG TTTGTATCATAAAGG ycfO 1151812 - 1152837 + | beta-hexosaminidase ycfP 1152860 - 1153402 + | hypothetical protein ndh 1153810 - 1155114 + | respiratory NADH dehydrogenase TERM 1434 1155181 - 1155213 + F 76 -12 -2.60723 | opp_overlap 1155190, overlap 1155180 TGGTACGAGCGGTAG GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC ATTCCTTCAGACTCC ycfJ 1155341 - 1155880 + | hypothetical protein TERM 1435 1155902 - 1155930 + T 100 -12.4 -5.06103 | TGTACTCTGCAATTT GGCCCCTCATTC GCTCA GGCTGAGGGGCC TTTTTTGCGACTTAT ycfQ 1156652 - 1155942 - | hypothetical protein TERM 1436 1156530 - 1156540 + g 100 -2.4 -5.77853 | GTCGAACACTTTTGG GCGG CCA CGGC TTTTTTTTACACATT TERM 1437 1156844 - 1156831 - H 70 -2.3 -4.92239 | opp_overlap 1156836 TGAAAAACGTAAAAA CCTCA TCGC TGCGG CGATTTTAAGCTCCA ycfR 1156859 - 1157071 + | hypothetical protein TERM 1438 1157110 - 1157136 + T 100 -18.8 -5.93809 | CTACTGCTGATTTTT TCCCCGCGACAT GCC GTGTCGCGGGGA TTTTTTTTATCCAGG ycfS 1158116 - 1157154 - | hypothetical protein TERM 1439 1158230 - 1158251 + r 72 -10.8 -2.84878 | overlap 1158229 TGTAAATGTTGCAGA TGGGGGCG CAGAAA CGCCCCCG ATTTACATTAAGCGA mfd 1161705 - 1158259 - | transcription-repair coupling factor TERM 1440 1159221 - 1159233 + g 70 -6.9 -4.01564 | GCACCAGTTCTGCCA GCCGT TCG GCGGC TTTCTGAATGTTTTC TERM 1441 1160476 - 1160486 + g 72 -5.4 -4.45544 | opp_overlap 1160463 AAGACGCATAATGCG TTGC GGA GCAA TTTTAATTCGTGCGA TERM 1442 1160586 - 1160601 + g 77 -3.2 -5.07486 | opp_overlap 1160582, overlap 1160582 CGAGGAACTTACGCA GCGC ATCCAGCG GCGC TTTTTGTTGCGCCTG ycfT 1162906 - 1161833 - | hypothetical protein TERM 1443 1162251 - 1162236 - G 81 -9 -4.08651 | opp_overlap 1162250, overlap 1162248 ACGGTAAGCAAAGAA GCCATC AGCA GATGGC GGCGCAACGGCACCT TERM 1444 1163898 - 1163885 - g 90 -8.1 -4.77157 | overlap 1163878 TTAAGTCAGCAAAAA CTGCC TGAA GGCAG CAAATGGCAGGACTG ycfU 1163168 - 1164367 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1164360 - 1165061 + | lipoprotein transporter ATP-binding subunit ycfW 1165061 - 1166305 + | outer membrane-specific lipoprotein transporter subunit LolE ycfX 1166334 - 1167245 + | N-acetyl-D-glucosamine kinase TERM 1445 1167325 - 1167309 - g 75 -4.4 -4.85782 | gap 1, opp_overlap 1167309 1167312 1167315, overlap 1167311 TTTCGTAAAAATAAA CG-TCGC CTGC GCGAGCG TTTGCGTCAGCGTAT TERM 1446 1167328 - 1167339 + G 82 -2.2 -5.41143 | overlap 1167315 1167312 GCCTGCGCGAGCGTT TGCG TCAG CGTA TTTTTTTCAGAGATA cobB 1167261 - 1168082 + | NAD-dependent deacetylase TERM 1447 1168206 - 1168229 + T 71 -9.5 -3.22091 | opp_overlap 1168207, overlap 1168207 CTTGCTAACTAAAAA ACGGGCGGT AATACC ACCGCCCGC TTGCTGAATTAACGT TERM 1448 1168228 - 1168207 - T 100 -13.7 -5.26875 | opp_overlap 1168207 1168206 TTGCTAACTAAAAAA CGGGCGGTA ATAC CACCGCCCG CTTGCTGAATTAACG TERM 1449 1168207 - 1168228 + T 80 -13 -2.52933 | opp_overlap 1168207, overlap 1168206 TTGCTAACTAAAAAA CGGGCGGT AATACC ACCGCCCG CTTGCTGAATTAACG potD 1169284 - 1168238 - | spermidine/putrescine ABC transporter periplasmic substrate-binding protein potC 1170075 - 1169281 - | spermidine/putrescine ABC transporter membrane protein potB 1170929 - 1170072 - | spermidine/putrescine ABC transporter membrane protein potA 1172049 - 1170913 - | putrescine/spermidine ABC transporter ATPase protein TERM 1450 1172960 - 1172948 - g 77 -2.7 -5.0916 | opp_overlap 1172948 CGGTCAATATAAAAA TTGTC GGT AACAA TGTTCATCCGGGCAC pepT 1172299 - 1173525 + | peptidase T TERM 1451 1173559 - 1173533 - T 83 -9.4 -4.32201 | opp_overlap 1173533, overlap 1173534 GGAAGTAAGCGAAAA GGGATGCGGCAT GTG ATGCTGCATCCG GCTTAAATCCAAACT TERM 1452 1173558 - 1173534 - T 83 -12.9 -3.18598 | opp_overlap 1173533, overlap 1173533 GAAGTAAGCGAAAAG GGATGCGGCAT GTG ATGCTGCATCC GGCTTAAATCCAAAC ycfD 1174704 - 1173574 - | hypothetical protein SF1131 1174923 - 1175291 + | putative integrase of prophage CP-933C SF1132 1175319 - 1176173 + | putative integrase of prophage CP-933C TERM 1453 1176161 - 1176184 + F 75 -2.6 -5.1287 | gap 1, overlap 1176163 CACGCTACCAGTAGC CA-GAAGAAAA TAA TTTTTTTCGTG TTTTTTCAGTATGCG TERM 1454 1176385 - 1176363 - f 85 -5.6 -5.30686 | opp_overlap 1176363 AATAGCGAGAAAAAA GGCATGAAAC AAT ATTTTATGCC TTTGTATTAACATGA TERM 1455 1176363 - 1176385 + F 74 -7.1 -4.20368 | opp_overlap 1176363 AATAGCGAGAAAAAA GGCATGAAA CAATA TTTTATGCC TTTGTATTAACATGA TERM 1456 1176910 - 1176890 - g 100 -11.8 -5.64274 | opp_overlap 1176889 1176890 TCAGGCATAAAAAAA GCGGCCCC GAAAT GGAGCCGC CTTTCTGAACAGATA TERM 1457 1177231 - 1177203 - g 71 -9.5 -3.51232 | opp_overlap 1177202, overlap 1177204 GCGCCTGTAAAGCAA TGCGCCGTAGTAC CTC ACACCACGGCGCT GATAGTTTTTATCCT TERM 1458 1177230 - 1177204 - g 81 -13 -2.70525 | opp_overlap 1177202, overlap 1177203 CGCCTGTAAAGCAAT GCGCCGTAGTAC CTC ACACCACGGCGC TGATAGTTTTTATCC TERM 1459 1177522 - 1177484 - g 74 -2.4 -5.1485 | gap 1, opp_overlap 1177489, overlap 1177489 CAATCAACACAAAAA GCAAAGCCCCG-CACTG TAGGAG CAGTAACGGGGCTTCTA ACCAACAACGTAAAC TERM 1460 1177517 - 1177489 - g 81 -8.9 -4.41882 | gap 1, opp_overlap 1177489, overlap 1177484 AACACAAAAAGCAAA GCCCCG-CACTG TAGGAG CAGTAACGGGGC TTCTAACCAACAACG SF1133 1176794 - 1177540 + | hypothetical protein SF1134 1178414 - 1178713 + | hypothetical protein TERM 1461 1178747 - 1178737 - g 88 -2.4 -5.53288 | CCGAACGTAAAAAAA CAGC CAC GCGG AATAAAACACAAAGA TERM 1462 1179441 - 1179425 - g 74 -7.9 -4.13767 | CGCTTGACCTGAAAA CGGGGGA ATT TTCCCCG CACACGCCGGAGAAC TERM 1463 1179862 - 1179842 - g 70 -3.9 -4.71426 | overlap 1179843 CGGGCATCAAGAAAA TCACGGG CGGTGAC CCCGTGG AAATTAACCCGAAAT SF1135 1178710 - 1180458 + | bacteriophage P4 DNA primase TERM 1464 1180437 - 1180449 + F 77 -3.3 -5.14894 | opp_overlap 1180437 CGCAATAACAACAGA CGAGT GCG ACGCG TTTTTATAATTTTTT SF1136 1180825 - 1181025 + | hypothetical protein TERM 1465 1181522 - 1181537 + F 100 -10.4 -5.49729 | GAACCACACCACGCA GCCGGA GCAA TCCGGC TTTTTTTGCGTCATT SF1137 1181640 - 1181864 + | hypothetical protein TERM 1466 1181900 - 1181885 - f 73 -10.4 -3.04983 | opp_overlap 1181885 CATACAGCACATACA GCCGGA GCAA TCCGGC TTTTTGTTATTTTTT TERM 1467 1181885 - 1181900 + F 100 -10.4 -5.54403 | opp_overlap 1181885 CATACAGCACATACA GCCGGA GCAA TCCGGC TTTTTGTTATTTTTT TERM 1468 1182003 - 1182026 + F 72 -8.8 -3.57615 | TGATTATTCTCGCCC GTGGTGCCAG GACG CTGGGGCCAC TTTCCCGCCTGTTAA TERM 1469 1182128 - 1182157 + F 100 -7.9 -5.60993 | TTGAGTGTTTGCCGC GTCCTGGAGTT CCTTACTT AACCCCAGGAC TTTTTTTATGCAGAG TERM 1470 1182989 - 1182972 - f 77 -3.3 -5.1101 | overlap 1182974 GCATTACGTAAAAAA TACCGCA AAAA CGCGGTC TGAGTGGTTAACTCC TERM 1471 1183328 - 1183357 + F 86 -9.3 -4.42386 | opp_overlap 1183335, overlap 1183335 CGACGATTAACAGCA TACAGAAGGGGCT AAAA AGCCCCTTTAGTG TTTTATGGGTGAAAA TERM 1472 1183350 - 1183335 - f 79 -10.4 -3.64431 | opp_overlap 1183335 1183328 TAACAGCATACAGAA GGGGCT AAAA AGCCCC TTTAGTGTTTTATGG TERM 1473 1183335 - 1183350 + F 87 -10.4 -4.10958 | opp_overlap 1183335, overlap 1183328 TAACAGCATACAGAA GGGGCT AAAA AGCCCC TTTAGTGTTTTATGG SF1139 1183362 - 1183934 + | putative head maturation protease of prophage CP-933C TERM 1474 1184684 - 1184666 - g 72 -4.4 -4.60924 | overlap 1184667 1184668 GAAACGCCGGAAAAA CGCCCATC CTT GAAGGGGG GATGAGCTATCAGCA SF1140 1183936 - 1185147 + | putative head portal protein SF1141 1185144 - 1185482 + | putative head-tail adaptor SF1142 1185479 - 1185775 + | hypothetical protein SF1143 1186003 - 1186215 + | putative holin protein of prophage CP-933C TERM 1475 1186255 - 1186228 - g 72 -4.8 -4.64676 | opp_overlap 1186216, overlap 1186216 TGAGCGGGAACAAAA CCGCCTTATCCG TGGA CTTATAAGGCAG CGTGACGCATGGAAG TERM 1476 1186309 - 1186298 - g 72 -5.8 -4.40003 | GGGCATAAAGATAAA GCGT CAGG ACGC GCAGAACGCATCACA SF1144 1186199 - 1186381 + | hypothetical protein SF1145 1186452 - 1186763 + | hypothetical protein SF1146 1186930 - 1188408 + | putative terminase of prophage CP-933C SF1147 1188422 - 1188703 + | hypothetical protein TERM 1477 1188737 - 1188724 - T 76 -8.1 -4.12738 | TGAGATTAAAGCAAA GCGCA AAAT TGCGC TGGCTACATCCCTCA TERM 1478 1189007 - 1188993 - T 73 -4.2 -4.84761 | opp_overlap 1188995 1189004, overlap 1188995 ACACCGTGACAAAAA GACGGT TTA ACCGTT CATTAAAAATCGACG TERM 1479 1189005 - 1188995 - T 71 -6.8 -4.04397 | opp_overlap 1188995 1189004, overlap 1188993 ACCGTGACAAAAAGA CGGT TTA ACCG TTCATTAAAAATCGA TERM 1480 1189042 - 1189058 + T 83 -6.6 -5.00616 | TTTGTGCTTTCCGGA TGACGT GGCCA ACGTCA TTTTTTAGCGAAAAA phoQ 1190960 - 1189500 - | sensor protein PhoQ TERM 1481 1190109 - 1190119 + g 77 -8.2 -4.13014 | CGTACTTTGCAGCAC CGCC AGT GGCG TTTTCAGACTATGGG TERM 1482 1190143 - 1190182 + g 72 -4.3 -4.60041 | gap 1 CTATGGGTCAGGTCG GTGAGCGTCGTACGGTAT TTGTC GTAACGTTCG-CGTTCAC TTTTTAACAATCGGT phoP 1191631 - 1190960 - | DNA-binding transcriptional regulator PhoP TERM 1483 1191791 - 1191760 - R 76 -9.4 -3.6968 | gap 1, opp_overlap 1191760 1191761 1191763, overlap 1191761 1191763 GGATAATCTTAATAA GCAG-GCCGGACAGC ATC GCCATCCGGCACTGA TTTGAGGCTTATTTC TERM 1484 1191790 - 1191761 - R 82 -12.9 -2.81326 | gap 1, opp_overlap 1191760 1191761 1191763, overlap 1191760 1191763 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG ATTTGAGGCTTATTT TERM 1485 1191787 - 1191763 - R 70 -9.9 -2.94759 | opp_overlap 1191763 1191761 1191760, overlap 1191761 1191760 TAATCTTAATAAGCA GGCCGGACAGC ATC GCCATCCGGCA CTGATTTGAGGCTTA purB 1193170 - 1191800 - | adenylosuccinate lyase ycfC 1193815 - 1193174 - | hypothetical protein TERM 1486 1193675 - 1193656 - G 75 -5.7 -4.59773 | gap 1, opp_overlap 1193657, overlap 1193657 CGCTACCGCCAAAAA CCGCCAGC GTCGA GCTGG-GG TTCATATCAATAATA trmU 1194957 - 1193851 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1487 1194867 - 1194853 - G 72 -7.8 -3.86346 | opp_overlap 1194855 CCAGTTCTTCATAAA CAGGCC TTC GACCTG ATATCCCTGTTGTTG SF1153 1195472 - 1195011 - | putative phosphohydrolase ymfC 1196105 - 1195482 - | 23S rRNA pseudouridine synthase E TERM 1488 1196083 - 1196095 + g 77 -2.7 -5.11613 | overlap 1196084 CGCTTAACCTGGTGA TTTCT AAA AGAAG TTTTTTGCATGGTAT icdA 1196307 - 1197557 + | isocitrate dehydrogenase TERM 1489 1197580 - 1197604 + F 100 -10 -5.05113 | opp_overlap 1197583, overlap 1197583 ATGTGTTAAATATTT AAACGGGCGT ATAAC ACGCCCGTTG TTTTATTTATGTGGA TERM 1490 1197601 - 1197583 - f 93 -12.4 -3.81137 | opp_overlap 1197580 1197583 TGTTAAATATTTAAA CGGGCGTA TAA CACGCCCG TTGTTTTATTTATGT TERM 1491 1197583 - 1197601 + F 100 -11.7 -4.60302 | opp_overlap 1197583, overlap 1197580 TGTTAAATATTTAAA CGGGCGT ATAAC ACGCCCG TTGTTTTATTTATGT TERM 1492 1199220 - 1199232 + G 70 -4.8 -4.57837 | GGGCAATAAATAATG GGGA GATCG TCCC TTTTTACCAACCTGT SF1156 1198442 - 1199965 + | hypothetical protein TERM 1493 1201338 - 1201314 - g 70 -5.7 -4.34912 | AAGTAATGAAAATAA TGCCATAGCAA AAC TGGATATGGCA AAAGGGGAGATCACA TERM 1494 1201766 - 1201780 + G 76 -4.2 -4.88736 | CGGATAGTGAGGTAT CATCGG CTG CAGATG TTTTTATCAATAATA SF1157 1201042 - 1203363 + | hypothetical protein TERM 1495 1203406 - 1203384 - T 100 -12 -5.08824 | CCGTTAGCTAAAAAA CCGCGTCG TATTCAT CGACGCGG TACATATGAAATATT SF1158 1203755 - 1203420 - | hypothetical protein SF1159 1204043 - 1203759 - | hypothetical protein TERM 1496 1205054 - 1205039 - R 84 -10.4 -3.85704 | opp_overlap 1205039 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGA TERM 1497 1205039 - 1205054 + r 93 -10.4 -4.54727 | opp_overlap 1205039 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGA TERM 1498 1205120 - 1205101 - R 90 -7 -5.40072 | overlap 1205102 TCTGGGGCAAAAAAA GCCCGCCA GTTA CGGCGGGA AACCTCATCCTATGG TERM 1499 1205119 - 1205102 - R 83 -10.5 -3.83561 | overlap 1205101 CTGGGGCAAAAAAAG CCCGCCA GTTA CGGCGGG AAACCTCATCCTATG TERM 1500 1205370 - 1205343 - R 100 -11.4 -4.76041 | overlap 1205344 GAGAGGGATGAAAAA CTCAAGGCAGAA ATGA CTCTGCCTTGAA GATAAATGCGTTTTT TERM 1501 1205369 - 1205344 - R 85 -12.7 -3.44902 | overlap 1205343 AGAGGGATGAAAAAC TCAAGGCAGAA ATGA CTCTGCCTTGA AGATAAATGCGTTTT minE 1205661 - 1205395 - | cell division topological specificity factor MinE minD 1206477 - 1205665 - | cell division inhibitor MinD minC 1207196 - 1206501 - | septum formation inhibitor SF1164 1208825 - 1207920 - | insertion element IS2 transposase InsD SF1165 1209148 - 1208783 - | insertion sequence 2 OrfA protein TERM 1502 1209478 - 1209509 + H 73 -10.2 -3.01914 | gap 1, overlap 1209477 1209472 1209486 GAGTGGGGCGTTAAC GTCTA-TGACGGGGA TAG TCCCCGTCGGTTGAC ATTTACTTAATTTGA TERM 1503 1209486 - 1209500 + H 73 -11.4 -2.56046 | overlap 1209478 1209477 1209472 CGTTAACGTCTATGA CGGGGA TAG TCCCCG TCGGTTGACATTTAC SF1166 1209866 - 1210174 + | IS3 ORF1 TERM 1504 1210448 - 1210421 - g 75 -4.7 -4.74103 | overlap 1210422 1210423 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC SF1167 1210171 - 1211025 + | IS3 ORF2 TERM 1505 1211269 - 1211281 + F 74 -3.3 -5.00616 | opp_overlap 1211269 1211270, overlap 1211254 CTGCGTTCGGTAAAA TCCCG GCG CGGCA TTTTTTGCCGGGGGG ycgL 1211383 - 1211709 + | hypothetical protein SF1169 1211781 - 1212440 + | hypothetical protein ycgN 1212532 - 1212978 + | hypothetical protein umuD 1214458 - 1214877 + | DNA polymerase V subunit UmuD umuC 1214877 - 1216145 + | DNA polymerase V subunit UmuC TERM 1506 1216182 - 1216165 - T 100 -12.7 -5.14965 | AGCGGCAGGAAAAAA GCGCTCC CGCA GGAGCGC CGAATGGATTAGCGA dsbB 1216721 - 1216191 - | disulfide bond formation protein B TERM 1507 1216348 - 1216315 - G 81 -4.5 -5.1287 | gap 1, overlap 1216317 TCCATACCTAAAAAA TC-CCACTGACGCTCG GCG CAATCGCCAGAGGCGA CAAACACTTGCGGCA TERM 1508 1216833 - 1216860 + r 79 -9.8 -3.79113 | opp_overlap 1216831 1216837, overlap 1216837 TATCGGGCGAAAAGG CAAACCGGGCAT TTAT ATGCCCGGTAAG TTGTTATCAAAGCGT TERM 1509 1216856 - 1216837 - R 100 -13.6 -3.92659 | opp_overlap 1216833 1216837, overlap 1216831 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA TERM 1510 1216837 - 1216856 + r 83 -13.6 -2.68806 | opp_overlap 1216837 1216831, overlap 1216833 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA nhaB 1218408 - 1216867 - | sodium/proton antiporter TERM 1511 1217350 - 1217332 - G 80 -5.3 -4.88736 | gap 1 GACTACCGAGAAAAA CACCGTCA ACAG TG-CGGTG AATGGCAGAGATTCG fadR 1218629 - 1219348 + | fatty acid metabolism regulator TERM 1512 1219371 - 1219386 + T 100 -10.4 -5.80727 | opp_overlap 1219370 1219371 CGTTTAAAGAGCAAC CCCCTC AAAC GAGGGG TTTTTTGTTGTTTTT TERM 1513 1219386 - 1219371 - T 71 -10.4 -2.67021 | opp_overlap 1219371, overlap 1219370 CGTTTAAAGAGCAAC CCCCTC AAAC GAGGGG TTTTTTGTTGTTTTT ycgB 1220932 - 1219400 - | hypothetical protein TERM 1514 1220343 - 1220355 + g 76 -4.1 -5.01732 | TGCCGGGCTTTCTCT TCTTG CAG CGAGA TTTTTTGCGGGCGTT dadA 1221262 - 1222560 + | D-amino acid dehydrogenase small subunit dadX 1222570 - 1223640 + | alanine racemase TERM 1515 1223747 - 1223773 + T 88 -12.5 -3.53224 | opp_overlap 1223749 AGCCATTGCCCATGA TAGTGTCCATT AAAAG AATGGACACTA TTTCCCCGGAACCTG TERM 1516 1223771 - 1223749 - T 72 -10.7 -2.78816 | opp_overlap 1223747 CCATTGCCCATGATA GTGTCCATT AAAAG AATGGACAC TATTTCCCCGGAACC SF1180 1225115 - 1224072 - | invasion plasmid antigen SF1181 1227569 - 1225833 - | potassium/proton antiporter ldcA 1228560 - 1227664 - | L,D-carboxypeptidase A mltE 1228631 - 1229290 + | murein transglycosylase E TERM 1517 1229298 - 1229312 + T 74 -5.6 -4.58283 | CGATGTAAATCAGTC GCGCAC TTT GTCCGC TTTTTCCCGGGCTTC ycgR 1230026 - 1229292 - | hypothetical protein SF1185 1230194 - 1230481 + | hypothetical protein TERM 1518 1230524 - 1230493 - f 70 -9.4 -3.33583 | opp_overlap 1230494, overlap 1230494 ATAAGATTTTCATAA GGCGGATAGCGATA CAGA TGCCGCTATCCGCT TTCACATCAGAACGT TERM 1519 1230494 - 1230523 + F 90 -12.9 -3.59979 | opp_overlap 1230493 1230494 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 1520 1230523 - 1230494 - f 81 -12.9 -2.59668 | opp_overlap 1230494, overlap 1230493 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG mltE 1230618 - 1231133 + | murein transglycosylase E TERM 1521 1231141 - 1231155 + T 74 -5.6 -4.58283 | CGATGTAAATCAGTC GCGCAC TTT GTCCGC TTTTTCCCGGGCTTC SF1187 1231869 - 1231135 - | hypothetical protein ymgE 1232070 - 1232324 + | hypothetical protein TERM 1522 1232367 - 1232336 - T 70 -9.4 -3.33583 | opp_overlap 1232337, overlap 1232337 ATAAGATTTTCATAA GGCGGATAGCGATA CAGA TGCCGCTATCCGCT TTCACATCAGAACGT TERM 1523 1232366 - 1232337 - T 81 -12.9 -2.59668 | opp_overlap 1232337, overlap 1232336 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 1524 1232337 - 1232366 + T 90 -12.9 -3.59979 | opp_overlap 1232337 1232336 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 1525 1233390 - 1233402 + T 100 -4.7 -5.93252 | opp_overlap 1233390 TGTAATCGGAATAAT GGCTG TAG CTGCC TTTTTTATTTTTCAA modD 1235208 - 1234354 - | molybdenum transport protein ModD SF1191 1236017 - 1235208 - | hypothetical protein TERM 1526 1235919 - 1235944 + g 91 -5.3 -5.37043 | TTCCGCCATTTTCTC CGCCCGTTGAT CCCA GTGATCGGGCG TTTTTTCTGTGCGGT SF1192 1236785 - 1236027 - | putative ferric enterobactin transport ATP-binding protein SF1193 1237762 - 1236782 - | putative iron compound ABC transporter permease protein SF1194 1238784 - 1237762 - | putative ATP-binding protein of ABC transporter TERM 1527 1238833 - 1238808 - RH 84 -8.5 -4.67038 | TCCTGAAAAGTAAAA TCGATATATAC TTTC ATATATATCGA TAAAAATCATGTTCA insB 1239790 - 1239497 - | IS1 ORF2 SF1195 1239104 - 1239562 + | hypothetical protein insA 1240195 - 1239920 - | IS1 ORF1 SF1198 1240621 - 1241829 + | iso-IS10R ORF TERM 1528 1242424 - 1242413 - T 79 -4.4 -5.24129 | opp_overlap 1242413, overlap 1242420 1242422 TCTGTGTAGAAAAAA CCAT AGAT ATGG TGTTATCTGCCGACA TERM 1529 1242424 - 1242481 + T 71 -10.6 -2.74563 | gap 1, opp_overlap 1242422 1242420 1242441, overlap 1242441 AAAACCATAGATATG GTGTTATCTGCCGACAACGCCATCCGG AGAAG CCGAATGACGTTGTCGG-AGTAAGCGC TGGTTAAGGTGTGGG TERM 1530 1242465 - 1242441 - T 71 -10 -3.29511 | opp_overlap 1242424 1242441, overlap 1242422 1242420 GTTATCTGCCGACAA CGCCATCCGG AGAAG CCGAATGACG TTGTCGGAGTAAGCG treA 1244182 - 1242485 - | trehalase ycgC 1245920 - 1244502 - | dihydroxyacetone kinase subunit M TERM 1531 1245407 - 1245392 - G 74 -8.2 -4.00066 | overlap 1245395 TCGATAAGGTATAAA CCAGCC GGGA GGCCGG ACGTACATGCAGGCC SF1202 1246563 - 1245931 - | dihydroxyacetone kinase ADP-binding subunit TERM 1532 1245979 - 1246035 + g 73 -9.4 -3.5774 | gap 1, opp_overlap 1245972 1246026, overlap 1246033 CATAAACATCACCGA GGTCGCGCCGG-GATCCTGGTGACC AATACTGC GTTCACCGAGATAACTGGCGCGGCC TTTGCGGGCTTGCAT SF1203 1247674 - 1246574 - | dihydroxyacetone kinase subunit DhaK TERM 1533 1247759 - 1247779 + H 70 -9.9 -2.97934 | opp_overlap 1247758 1247759 1247761, overlap 1247761 AAAATTAGCCCAAAT TATGTTTCA TAG TGAAACATA TGCTTTAATGAATGT TERM 1534 1248753 - 1248765 + G 79 -4.7 -4.90302 | opp_overlap 1248753 ACCGATAATAGAAAC GCAGG GAA CCAGC TTTATTTTGTTGCTC TERM 1535 1249119 - 1249131 + G 72 -6.9 -4.15788 | GCTGGAACTGGCACA CGGCG GCA CGCTG TTTCTTGAAAAGATT SF1204 1247863 - 1249791 + | DNA-binding transcriptional regulator DhaR SF1205 1252758 - 1249891 - | putative adhesion and penetration protein TERM 1536 1253519 - 1253546 + r 75 -11.4 -3.10537 | opp_overlap 1253524, overlap 1253524 GGACTCGGTGAAATG AAAAATCCACGC AATT GCGTGGATTTTA TATACTTTTGCGCTC TERM 1537 1253524 - 1253541 + r 95 -11.3 -4.6709 | opp_overlap 1253524, overlap 1253519 CGGTGAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG TERM 1538 1253541 - 1253524 - R 100 -11.3 -4.98531 | opp_overlap 1253524 1253519 CGGTGAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG ychF 1254693 - 1253602 - | translation-associated GTPase TERM 1539 1254158 - 1254172 + g 70 -7.1 -4.11216 | CTTAAATCCAGCGCG CGCAG CATAC CTGCG TTTTCCAGCTGGGGC TERM 1540 1254232 - 1254243 + g 72 -5.8 -4.38927 | TTTCGCGTCTTTATC GCCA CCTT TGGC TTTCTTCTGTACGCG pth 1255394 - 1254810 - | peptidyl-tRNA hydrolase TERM 1541 1255480 - 1255464 - H 73 -2.2 -5.24129 | CCGCTTGACAAAAAA CTGCGT ATCAA ATGCAG ATAACGTAATAATTG ychH 1255672 - 1255950 + | hypothetical protein TERM 1542 1255967 - 1255996 + T 74 -11.5 -2.87963 | overlap 1255967 AAATAATGCAGTTTG CTGACCAGTCAGT TTGC GCTGACTGGTCAA TCTCGTACTTATAAA ychM 1257657 - 1256005 - | putative sulfate transporter YchM TERM 1543 1257777 - 1257790 + r 73 -9.5 -3.34894 | opp_overlap 1257777, overlap 1257775 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT TERM 1544 1257790 - 1257777 - R 100 -9.5 -5.76633 | opp_overlap 1257777 1257775 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT prsA 1258756 - 1257809 - | ribose-phosphate pyrophosphokinase TERM 1545 1258887 - 1258873 - R 75 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAACTCAGCTTGCC ychB 1259758 - 1258907 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 1260381 - 1259758 - | outer membrane lipoprotein LolB TERM 1546 1259833 - 1259843 + g 75 -6.8 -4.371 | overlap 1259829 CATATTGGCTGGCAT CGCA GGT TGCG TTTTGGTGTCATAAC TERM 1547 1259984 - 1260009 + g 73 -9.1 -3.5882 | CACTGGCGCAAGCTG TTGAGCGGAAT TGGC ATTCCGGTCAA TTTGCCAATCATCTC hemA 1260595 - 1261851 + | glutamyl-tRNA reductase TERM 1548 1262707 - 1262690 - g 79 -4.1 -5.1523 | TTCACAACATAAAAA CAAAGCG AAGG CGCTTTC AGTGCTCGGTGCTCG prfA 1261893 - 1262975 + | peptide chain release factor 1 TERM 1549 1263791 - 1263775 - g 72 -10.1 -3.31792 | TGACTATGGTGATAA CGAGCGC GTA ACGCTCG GCCGCTATTATCAAT hemK 1262975 - 1263808 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase SF1216 1263805 - 1264197 + | putative transcriptional regulator ychA 1264201 - 1265010 + | putative transcriptional regulator kdsA 1265046 - 1265900 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1550 1265945 - 1265923 - T 80 -6.3 -4.85782 | opp_overlap 1265923 TGCTTGAAAAATAAA GTCTTAGCG TTCTG CGTTAAGAC TTTTTTCATGGGTGC TERM 1551 1265923 - 1265945 + T 100 -9.2 -5.1675 | opp_overlap 1265923 TGCTTGAAAAATAAA GTCTTAGCGT TCT GCGTTAAGAC TTTTTTCATGGGTGC TERM 1552 1265999 - 1265974 - T 100 -13.3 -5.4251 | opp_overlap 1265973 1265972 1265993 GCCAGATACAAAAAA GGCCGCAGG CTGTTACC CCTGCGGCC GGTTTCGGGCGCATA TERM 1553 1266005 - 1266040 + T 76 -7.5 -4.21768 | gap 1, overlap 1265993 CCCTGCGGCCGGTTT CGGGCG-CATATTGCC ATCAC GGCAGCCTGACGCCCG TTTTCACCTTACTTC TERM 1554 1266223 - 1266264 + T 80 -6.5 -4.78848 | gap 1, overlap 1266188 1266187 1266186 TGGTTTCAAGATTAG CCCCCGTTTTGTTGTCAGGT TTT ACCTCTCAACGTG-CGGGGG TTTTCTCTTTCCAGC chaA 1267662 - 1266562 - | calcium/sodium:proton antiporter TERM 1555 1268072 - 1268051 - g 72 -6.5 -4.30253 | overlap 1268054 TATAAAGATAAAGAA GATCGGCGT GATG ACGCCAGTC GCGAAGAAACCGCGC chaB 1267931 - 1268161 + | cation transport regulator chaC 1268298 - 1269014 + | cation transport regulator ychN 1269411 - 1269058 - | hypothetical protein ychP 1269737 - 1270990 + | hypothetical protein narL 1271641 - 1270991 - | transcriptional regulator NarL narX 1273430 - 1271634 - | nitrate/nitrite sensor protein NarX TERM 1556 1271708 - 1271685 - G 70 -6 -4.15044 | gap 1, opp_overlap 1271685 TTTTTCGGGAATAAA GGTGACCACCA CTT CGGT-GCCACC TGATTCACGACGGCG TERM 1557 1272215 - 1272190 - G 74 -8.3 -3.92542 | TGCATCTGTAAACAA CTCACCTGCAT CTTC ATGCAAGAGAG AGATTGGGCAATAGA TERM 1558 1272397 - 1272373 - G 79 -12.1 -3.04144 | TGGTCATGGCTAAGA TGACGCCCCTG CGG CAGGGTCGCCA GCAAAATACCGTACT TERM 1559 1273636 - 1273618 - H 74 -5.4 -4.60487 | overlap 1273620 CAGCACCGTGAAAAA TCTCATAA TTT TTATGAAA TCACTGTACTCACTA TERM 1560 1273955 - 1273965 + G 81 -6.8 -4.67038 | opp_overlap 1273955 GTTGCGGTGAACTTA CCGA AAG TCGG TTTTAATTTTACGAC narK 1273769 - 1275160 + | nitrate transport protein nark TERM 1561 1275184 - 1275202 + F 100 -16 -5.64274 | ATTTGATTATCCTTT GCGCGGCA TGA TGCCGCGC TTTTTTTATGCGTCA TERM 1562 1275367 - 1275387 + F 73 -11.3 -2.57988 | opp_overlap 1275370, overlap 1275366 1275364 ATAAAACGTCTTAAT TTACAGCAT GTT ATGCTGTAA CTGTTAATTATCCTA TERM 1563 1275839 - 1275820 - g 76 -10.6 -3.32769 | opp_overlap 1275838, overlap 1275813 CTGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG TGCCAGCTACTCCTG TERM 1564 1277954 - 1277967 + G 72 -6.7 -4.1552 | ACGACATGAATACTT CGGAT ATGC ATCCG TTTATTCACCCGCTG narG 1275553 - 1279296 + | nitrate reductase 1 alpha subunit TERM 1565 1279390 - 1279376 - g 75 -5.6 -4.60041 | AGTTACCTGTAAAAA CGTCTG GAC CAGCCG TGAAGGCGTGGAATA narH 1279293 - 1280831 + | nitrate reductase 1, beta subunit TERM 1566 1280965 - 1280939 - g 73 -9.5 -3.5771 | opp_overlap 1280944, overlap 1280929 1280942 AAAAATCTGTCGAAA GAAGATGCCCA TGCGC TGGGCATTTTC CTGCGCGATTTAACG TERM 1567 1280944 - 1280960 + G 76 -8 -4.25848 | opp_overlap 1280942 1280939 1280929 TCTGTCGAAAGAAGA TGCCCA TGCGC TGGGCA TTTTCCTGCGCGATT narJ 1280828 - 1281538 + | nitrate reductase 1, delta subunit narI 1281538 - 1282215 + | nitrate reductase 1, cytochrome b(NR), gamma subunit TERM 1568 1282237 - 1282252 + T 100 -8.2 -5.60993 | opp_overlap 1282237 TTTAGTTCACATAGA CCCTGC TTCG GCGGGG TTTTTTTATGGGCAC purU 1283663 - 1282821 - | formyltetrahydrofolate deformylase TERM 1569 1282866 - 1282854 - G 77 -6.9 -4.44448 | ATTACCGTAAACAAA GACGC GTT GCGCC AGTACTTTGTATAGC ychJ 1284171 - 1283713 - | hypothetical protein ychK 1284284 - 1285189 + | hypothetical protein hnr 1285281 - 1286294 + | response regulator of RpoS TERM 1570 1287197 - 1287187 - g 70 -4.6 -4.56597 | CGTTGCTGGCAAAAA CCCC TCC GGGA GCTGGTGATGAAATT galU 1286496 - 1287404 + | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 1571 1287452 - 1287431 - T 79 -10.1 -3.76224 | opp_overlap 1287431, overlap 1287408 GTGTTATCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1572 1287431 - 1287452 + T 100 -12.3 -5.66684 | opp_overlap 1287408 1287431 GTGTTATCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1573 1287504 - 1287520 + T 100 -13.7 -4.08767 | opp_overlap 1287504 CCGGACAATAAAAAA TCCCGCC GCT GGCGGGA TTTTAAGCAAGTGCA TERM 1574 1287520 - 1287504 - T 100 -13.7 -5.55769 | opp_overlap 1287504 CCGGACAATAAAAAA TCCCGCC GCT GGCGGGA TTTTAAGCAAGTGCA hns 1287961 - 1287548 - | global DNA-binding transcriptional dual regulator H-NS tdk 1288566 - 1289183 + | thymidine kinase TERM 1575 1289458 - 1289487 + T 89 -9.3 -4.59109 | overlap 1289460 GCCCCAGAAGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGAGCTGTG TERM 1576 1289460 - 1289485 + T 100 -16.3 -3.90762 | overlap 1289458 CCCAGAAGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGAGCTG SF1239 1290815 - 1289469 - | IS4 orf TERM 1577 1290830 - 1290805 - G 100 -9.8 -5.61596 | opp_overlap 1290805 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1578 1290805 - 1290830 + g 73 -9.1 -3.61398 | opp_overlap 1290805 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 1579 1290927 - 1290940 + r 83 -4.5 -5.28826 | opp_overlap 1290927 AGCGCTACTGATTAA GCGGA TTTT TTCGC TTTTTTCTCAGCTTT adhE 1293598 - 1290923 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1580 1290957 - 1290967 + g 88 -8.2 -4.64763 | overlap 1290960 TTTTTCTCAGCTTTA GCCG GAG CGGC TTCTTTTTTCGCTGC TERM 1581 1290960 - 1290970 + g 77 -3.2 -5.09225 | overlap 1290957 TTCTCAGCTTTAGCC GGAG CGG CTTC TTTTTTCGCTGCAGT ychE 1294075 - 1294722 + | hypothetical protein TERM 1582 1294756 - 1294739 - T 76 -8.4 -4.05788 | opp_overlap 1294739, overlap 1294724 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA TERM 1583 1294739 - 1294756 + T 74 -8.4 -3.98113 | opp_overlap 1294724 1294739 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA insB 1295484 - 1295089 - | IS1 ORF2 insA 1295786 - 1295511 - | IS1 ORF1 TERM 1584 1296059 - 1296037 - H 73 -7.8 -4.08557 | GTCGCGAAAGAATAA TGTGTCTC GACAGGG GAGACACA GTACGAATCGACATA oppA 1296237 - 1297868 + | periplasmic oligopeptide binding protein TERM 1585 1297871 - 1297911 + F 82 -7 -4.87786 | gap 2, opp_overlap 1297877, overlap 1297872 1297875 1297876 TGTGAAGCACTAATG GCA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTGA TTTTTATCGCATTAC TERM 1586 1297872 - 1297910 + F 79 -10.5 -3.51948 | gap 2, opp_overlap 1297877, overlap 1297871 1297875 1297876 GTGAAGCACTAATGG CA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTG ATTTTTATCGCATTA TERM 1587 1297875 - 1297906 + F 81 -12.4 -3.22077 | gap 1, opp_overlap 1297877, overlap 1297872 1297871 1297876 AAGCACTAATGGCAA TAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTG TCTGATTTTTATCGC TERM 1588 1297876 - 1297904 + F 100 -15.3 -3.16187 | opp_overlap 1297877, overlap 1297875 1297872 1297871 AGCACTAATGGCAAT ACGTGGGGCAGGA GTG TCCTGCTCCACGG TGTCTGATTTTTATC TERM 1589 1297903 - 1297877 - f 100 -16.6 -3.10464 | opp_overlap 1297876 1297875 1297872 1297871 GCACTAATGGCAATA CGTGGGGCAGGA GTG TCCTGCTCCACG GTGTCTGATTTTTAT TERM 1590 1298363 - 1298381 + G 70 -4.4 -4.5442 | opp_overlap 1298363, overlap 1298348 1298365 TGGGGCTGGCAATGA CCGGGGTT GTT ATCCCCAG TTTTGTGGTTGCGCC TERM 1591 1298795 - 1298812 + G 74 -2.7 -4.93877 | overlap 1298785 1298778 1298802 TAAGCCTGACCATCC TGGTTGG TGCG TTAACCA TTTTGTTTAATGCCA oppB 1297954 - 1298874 + | oligopeptide transporter permease TERM 1592 1298921 - 1298909 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1298889 - 1299797 + | oligopeptide transport permease protein oppD 1299809 - 1300822 + | oligopeptide transporter ATP-binding component TERM 1593 1301675 - 1301657 - g 93 -8.8 -4.95547 | TGGAGAAGAACAAAA CCATCCAG TTA CTGGAAGG GGAATTACCGTCGCC oppF 1300819 - 1301823 + | ATP-binding protein of oligopeptide ABC transport system TERM 1594 1301858 - 1301827 - T 93 -10.2 -4.57073 | opp_overlap 1301833, overlap 1301830 1301833 GATCCGCTTTAAAAA CAATAAGGGCTGAC AGTT GTCAGCCCTTTTTC ACGCTAAAAGCGATT TERM 1595 1301855 - 1301830 - T 100 -11.9 -4.40561 | opp_overlap 1301833, overlap 1301827 1301833 CCGCTTTAAAAACAA TAAGGGCTGAC AGTT GTCAGCCCTTT TTCACGCTAAAAGCG TERM 1596 1301852 - 1301833 - T 100 -13.6 -4.31587 | opp_overlap 1301833, overlap 1301830 1301827 CTTTAAAAACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCTAAAA TERM 1597 1301833 - 1301852 + T 100 -13.6 -4.59773 | opp_overlap 1301833 1301830 1301827 CTTTAAAAACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCTAAAA SF1249 1302205 - 1301876 - | dsDNA-mimic protein cls 1303700 - 1302240 - | cardiolipin synthetase TERM 1598 1302281 - 1302269 - G 78 -9.1 -3.88577 | overlap 1302267 TGAAGAAGTAAAACA GTCGC TCG GCGAC ACGTTGCCATAATGG TERM 1599 1302907 - 1302878 - G 78 -8.5 -4.2461 | opp_overlap 1302880, overlap 1302881 1302882 AGTCGCAGGAATAAA TAATCCCCATCGC GGTG GCGATGGGGCCTT CCATACGCGCCATCA TERM 1600 1302904 - 1302881 - G 95 -12.4 -4.24413 | opp_overlap 1302880, overlap 1302878 1302882 CGCAGGAATAAATAA TCCCCATCGC GGTG GCGATGGGGC CTTCCATACGCGCCA TERM 1601 1302903 - 1302882 - G 100 -15.9 -3.13925 | opp_overlap 1302880, overlap 1302881 1302878 GCAGGAATAAATAAT CCCCATCGC GGTG GCGATGGGG CCTTCCATACGCGCC TERM 1602 1303167 - 1303144 - G 74 -3 -5.00616 | overlap 1303148 GGGCTGCGGAAAAAA GCCACACTCC CGGC GGAGTCGAGC ATCAATCGGCAATGA TERM 1603 1304047 - 1304018 - R 72 -8.7 -3.79071 | gap 1, opp_overlap 1304018 1304014 1304013 1304019 1304022, overlap 1304019 1304022 TCTACAATATCTAAA TGTACTGGGCACCA TTG CGGTGCCCAATA-A GTTTACTCTTCCGTC TERM 1604 1304047 - 1304019 - R 72 -10.3 -2.86961 | opp_overlap 1304018 1304014 1304013 1304019 1304022, overlap 1304018 1304022 CTACAATATCTAAAT GTACTGGGCACCA TTG CGGTGCCCAATAA GTTTACTCTTCCGTC TERM 1605 1304044 - 1304022 - R 76 -12 -2.67958 | opp_overlap 1304022 1304019 1304018 1304014 1304013, overlap 1304018 1304019 CAATATCTAAATGTA CTGGGCACCA TTG CGGTGCCCAA TAAGTTTACTCTTCC kch 1305324 - 1304071 - | voltage-gated potassium channel TERM 1606 1305607 - 1305577 - H 76 -9.1 -3.74178 | opp_overlap 1305580, overlap 1305583 TAAGGAAAGGCCAAA CAAGAACACGGTT GCAAA AACCGTGCCCTTA AATATTGGATCTCTA TERM 1607 1305601 - 1305583 - H 79 -8.9 -4.1023 | opp_overlap 1305580, overlap 1305577 AAGGCCAAACAAGAA CACGGTT GCAAA AACCGTG CCCTTAAATATTGGA SF1252 1305687 - 1305989 + | IS600 ORF1 SF1253 1306130 - 1306843 + | IS600 ORF2 yciI 1307187 - 1306891 - | YciI-like protein TERM 1608 1308044 - 1308034 - g 81 -6.8 -4.62069 | GCGTGAGGTGAAAAA TGCG ATG CGCA GATGGCGTTATGAGC tonB 1307402 - 1308130 + | transport protein TonB TERM 1609 1308136 - 1308169 + T 100 -16.9 -3.14564 | opp_overlap 1308138 1308145, overlap 1308138 1308145 AATTCAGTAAGCAGA AAGTCAAAAGCCTCC GACC GGAGGCTTTTGACTA TTACTCAACAGGTAA TERM 1610 1308138 - 1308167 + T 100 -19.5 -3.13522 | opp_overlap 1308138 1308145, overlap 1308136 1308145 TTCAGTAAGCAGAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAC TATTACTCAACAGGT TERM 1611 1308167 - 1308138 - T 100 -19.5 -4.08144 | opp_overlap 1308136 1308138 1308145, overlap 1308145 TTCAGTAAGCAGAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAC TATTACTCAACAGGT TERM 1612 1308145 - 1308160 + T 90 -10.4 -4.29325 | opp_overlap 1308145 1308138, overlap 1308138 1308136 AGCAGAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGACTATTACTC TERM 1613 1308160 - 1308145 - T 93 -10.4 -4.40173 | opp_overlap 1308138 1308136 1308145, overlap 1308138 AGCAGAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGACTATTACTC yciA 1308568 - 1308170 - | acyl-CoA thioester hydrolase TERM 1614 1308621 - 1308587 - R 90 -10.8 -4.22948 | overlap 1308593 AAAACCGACTTAAAA GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC TGAGGAGAACAGAGG yciB 1309212 - 1308673 - | intracellular septation protein A TERM 1615 1308903 - 1308919 + g 72 -4.3 -4.7254 | overlap 1308876 1308904 GTTCTTTACTCAGCA TCCGCTG AAT TAGCGGC TTTTTCATCACCCAT yciC 1309985 - 1309242 - | hypothetical protein TERM 1616 1310401 - 1310419 + G 82 -3 -5.28176 | overlap 1310403 TTCTGGCAGTGCCTT TGCGCATG AAG CAGGCGAA TTTTTTATGCGTGCA yciD 1310342 - 1310980 + | outer membrane protein W TERM 1617 1311016 - 1310994 - T 100 -14.2 -4.84017 | overlap 1310971 1310995 AATTCCGCACAAAAA CGACCCCGTA ATA TACGGGGTCA ATAAGGACATGGTAT TERM 1618 1311015 - 1310995 - T 100 -15.5 -3.49687 | overlap 1310971 1310994 ATTCCGCACAAAAAC GACCCCGTA ATA TACGGGGTC AATAAGGACATGGTA yciE 1311546 - 1311040 - | hypothetical protein TERM 1619 1311378 - 1311394 + g 71 -2.2 -5.00138 | GATCAAGAATAGTTT CCAGTT GAACA ATCTGG TTTTTGGTTTCACTA yciF 1312092 - 1311592 - | putative structural protein TERM 1620 1312134 - 1312113 - R 85 -13.7 -2.94144 | opp_overlap 1312110, overlap 1312110 TCTCCAGTGAAATCA CTGCGAGCC ATAC GGCCCGCAG ATGCAATTATCTTTA yciG 1312414 - 1312178 - | hypothetical protein TERM 1621 1312730 - 1312708 - R 95 -11.2 -4.45261 | overlap 1312709 TAAAGAAAGTTAAAA TGCCGCCAGC GGA ACTGGCGGCT GTGGGATTAACTGCG TERM 1622 1312729 - 1312709 - R 90 -14.7 -3.2553 | overlap 1312708 AAAGAAAGTTAAAAT GCCGCCAGC GGA ACTGGCGGC TGTGGGATTAACTGC trpA 1313543 - 1312737 - | tryptophan synthase subunit alpha trpB 1314736 - 1313543 - | tryptophan synthase subunit beta trpC 1316109 - 1314748 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1623 1314839 - 1314851 + g 86 -10.5 -3.89614 | opp_overlap 1314838 1314837 1314834 GAATTAAAATCAAGT CCGGC GCA GCCGG TTTGTGCCGCTTCCA trpD 1317705 - 1316110 - | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 1624 1317029 - 1317053 + g 74 -6.4 -4.46854 | gap 1, overlap 1317030 TTCAGCTCGCCACGC ACCACC-GCTG AAAA CAGCTGGTGGC TTTCTTGTTGGCTAA TERM 1625 1317030 - 1317052 + g 70 -9.9 -3.27389 | gap 1, overlap 1317029 TCAGCTCGCCACGCA CCACC-GCTG AAAA CAGCTGGTGG CTTTCTTGTTGGCTA trpE 1319267 - 1317705 - | anthranilate synthase component I TERM 1626 1319242 - 1319252 + g 82 -3.2 -5.20783 | TCGCAGGTTAGCAGT TCGA GAG TCGG TTTTTGTGTTTGCAT TERM 1627 1319315 - 1319297 - R 100 -8.8 -5.75342 | TTTGTTCAAAAAAAA GCCCGC TCATTAG GCGGGC TGGGTATCTGATTGC trpL 1319403 - 1319359 - | trp operon leader peptide yciV 1319650 - 1320450 + | putative enzyme TERM 1628 1320601 - 1320590 - gT 79 -3.6 -5.1167 | AATTGAAGATAAAAA CGCC ATGG AGCG TATTTGTCGTATTCG yciO 1320411 - 1321067 + | hypothetical protein TERM 1629 1321101 - 1321118 + T 72 -9.1 -3.49851 | opp_overlap 1321101, overlap 1321097 TACGCGGCCTTAAAA TGGCGCT ATAC GGCGCCA TTGATTCTCCTGTTC TERM 1630 1321118 - 1321101 - T 76 -8.4 -4.07885 | opp_overlap 1321097 1321101 TACGCGGCCTTAAAA TGGCGC TATACG GCGCCA TTGATTCTCCTGTTC TERM 1631 1322020 - 1322040 + T 84 -8.3 -4.62872 | opp_overlap 1322020 1322017 CGGTTAATCAAAGTA TGCCGGA CGTCATA TCCGGCA TTTTTACAGATTAAT btuR 1322641 - 1322051 - | cob(I)yrinic acid a,c-diamide adenosyltransferase yciK 1323396 - 1322638 - | short chain dehydrogenase TERM 1632 1323736 - 1323724 - g 82 -9.1 -4.2528 | GCTCAACGTAATAAA CGCCA GCG TGGCG AGTTACGGGTCAACA sohB 1323616 - 1324665 + | putative periplasmic protease TERM 1633 1324693 - 1324674 - T 95 -11.4 -4.46775 | opp_overlap 1324674 GATGTAAAAGACAAA CGCGAGGC TAAA ACCTCGCG TTTTGCTTTAATCAA TERM 1634 1324674 - 1324693 + T 93 -10.7 -4.58773 | opp_overlap 1324674 GATGTAAAAGACAAA CGCGAGG CTAAAA CCTCGCG TTTTGCTTTAATCAA yciN 1324952 - 1324701 - | hypothetical protein TERM 1635 1325480 - 1325469 - g 70 -4.4 -4.58395 | CTCAGCTGCCAAAAA GAGT GCCG ACTC TACCTCCACCAAGAC TERM 1636 1326136 - 1326121 - g 74 -6 -4.56775 | AGTCTGCTGGAAAAA GCGCGC TACA GCGTGC TGGAACGTGAAGACA TERM 1637 1326253 - 1326242 - g 90 -4.4 -5.40072 | TTGGCGTGAAAAAAA CCAT GATG ATGG CGCAGCGTTTGTATG topA 1325332 - 1327929 + | DNA topoisomerase I TERM 1638 1327953 - 1327985 + F 74 -10.8 -3.29121 | gap 1, opp_overlap 1327961, overlap 1327961 TCTGTCAGGTTTTTA TAAACAAAGGGTCGC GAAA GCGGCCCTTT-TTTA TTGCATATTATTTTT TERM 1639 1327978 - 1327961 - f 81 -8.3 -4.55295 | opp_overlap 1327953 1327961 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT TERM 1640 1327961 - 1327978 + F 100 -10.5 -5.49234 | opp_overlap 1327961, overlap 1327953 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT cysB 1328139 - 1329113 + | transcriptional regulator CysB TERM 1641 1329127 - 1329160 + F 73 -9.7 -3.35613 | overlap 1329124 AATTTCTTGCGTTAT TTTCGGCACCTTT TATGTAGC GAAGGTGCCGGAA TATATTCTCTTTTGT SF1278 1329408 - 1329572 + | hypothetical protein yciX 1329554 - 1329742 + | hypothetical protein TERM 1642 1329959 - 1329974 + F 93 -11.8 -3.66643 | CTCACTGATCCTTGA CCCCGC TGCG GCGGGG TTGTCATTTGCTTTG TERM 1643 1330479 - 1330518 + G 75 -7.3 -4.32034 | gap 2, overlap 1330478 TTAACCCGCTCTCAC CGGTCGACCTGGTCATTGA CCAC TCGGTGACC-G-TCGATCG TTTTGGTGATGATGA TERM 1644 1332409 - 1332399 - g 72 -8.2 -3.82433 | opp_overlap 1332398, overlap 1332389 ATAAGCAGGAGCAAA CGCC GCT GGCG GTGATTGCCGGGAAA acnA 1330115 - 1332790 + | aconitate hydratase TERM 1645 1332831 - 1332797 - T 78 -11.6 -2.98947 | opp_overlap 1332797, overlap 1332794 TTGAAGTAACAAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TGAATTACACGATGC TERM 1646 1332797 - 1332831 + T 76 -11.6 -2.52896 | opp_overlap 1332794 1332797 TTGAAGTAACAAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TGAATTACACGATGC ribA 1333444 - 1332854 - | GTP cyclohydrolase II pgpB 1333614 - 1334378 + | phosphatidylglycerophosphatase B yciS 1334527 - 1334835 + | hypothetical protein TERM 1647 1335649 - 1335635 - g 70 -7.1 -4.08945 | AGCAGTTGGGTAAAA CTGCC GAATG GGCAG AATTCCTGCAACGCG yciM 1334842 - 1336011 + | hypothetical protein pyrF 1336204 - 1336941 + | orotidine 5'-phosphate decarboxylase yciH 1336938 - 1337267 + | translation initiation factor Sui1 TERM 1648 1337276 - 1337295 + T 93 -13.6 -3.63589 | opp_overlap 1337276, overlap 1337268 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAAATATTTTA TERM 1649 1337295 - 1337276 - T 100 -13.6 -5.0916 | opp_overlap 1337276 1337268 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAAATATTTTA osmB 1337612 - 1337394 - | lipoprotein SF1288 1338630 - 1337881 - | putative DEOR-type transcriptional regulator SF1289 1338902 - 1338720 - | hypothetical protein TERM 1650 1341239 - 1341215 - R 100 -13.6 -4.42062 | GAGCGGGGAAATAAA CGGCCCATCC ATGAG GAATGGGCCG TGAAAGGAGATTACG rnb 1343184 - 1341250 - | exoribonuclease II TERM 1651 1341435 - 1341424 - G 72 -7.2 -4.15222 | opp_overlap 1341424 1341423 AGGTGCCGGAATAAA GGCG ATAG CGCC GTTATCAACCAAACG TERM 1652 1341502 - 1341513 + g 75 -7.2 -4.32857 | opp_overlap 1341497, overlap 1341497 1341489 CGCCGCGAAACGGGT GCCG GTCC CGGC TTTATCTTTCAGGAA yciW 1344379 - 1343252 - | putative oxidoreductase TERM 1653 1343888 - 1343877 - G 75 -4.4 -4.75309 | opp_overlap 1343877 TGAAAGCCAATAAAA CCAA TGAT TTGG TTAATGATCACACAG TERM 1654 1344504 - 1344484 - R 93 -12.5 -3.71149 | opp_overlap 1344482 1344484 1344485, overlap 1344485 GTATAACAGAGATAA CGGGCGGCA GAA CGCCGCCCA TCTTTACCAACAGAA TERM 1655 1344484 - 1344504 + r 73 -9.6 -3.34398 | opp_overlap 1344484 1344485, overlap 1344482 1344485 GTATAACAGAGATAA CGGGCGGC AGAAC GCCGCCCA TCTTTACCAACAGAA TERM 1656 1344485 - 1344503 + r 81 -13.1 -2.60496 | opp_overlap 1344485 1344484, overlap 1344484 1344482 TATAACAGAGATAAC GGGCGGC AGAAC GCCGCCC ATCTTTACCAACAGA TERM 1657 1344503 - 1344485 - R 84 -13.8 -2.81966 | opp_overlap 1344484 1344482 1344485, overlap 1344484 TATAACAGAGATAAC GGGCGGCA GAA CGCCGCCC ATCTTTACCAACAGA fabI 1345311 - 1344523 - | enoyl-(acyl carrier protein) reductase TERM 1658 1345659 - 1345700 + r 100 -15.1 -3.20723 | gap 1 AACAGCTATTCGGCT CGGTCGG-CCCCCTCGCCCT TTC AGGGTGAGGGTGACCGGCGG TTCAGTTCCTGCAGA ycjD 1346032 - 1345679 - | hypothetical protein TERM 1659 1346028 - 1346074 + g 100 -19.8 -2.62184 | GATTTTATTTTATCC ATCACCTCATTCTGACAAGA TTTAATC TCTTGTCAGAATGAGGTGAA TAATCTGGAAGGAGG sapF 1346906 - 1346100 - | putative ATP-binding protein of peptide transport system TERM 1660 1346849 - 1346866 + g 77 -6.9 -4.45664 | opp_overlap 1346845 1346844 1346848 1346849 GACGACGAAACCAAC CGGTCCG GTAG CGGAACG TTTTACTTAAATTAC sapD 1347900 - 1346908 - | putative ATP-binding protein of peptide transport system sapC 1348790 - 1347900 - | peptide transport permease protein TERM 1661 1348506 - 1348485 - G 86 -10.9 -3.96892 | gap 1 AAGCGTCACCACAAA TGCGCC-ACC CAC GGTTGGCGCA GCTCCGCTCAGTAAA TERM 1662 1348728 - 1348761 + g 91 -10.9 -4.26188 | gap 1, opp_overlap 1348727 GTCACTATAAAATTT GCGCCAGGC-GGTACG CAG CGTGCCCGGCGGGCGC TTTTCGCTGTATACG sapB 1349742 - 1348777 - | peptide transport permease protein sapA 1351382 - 1349739 - | peptide transport periplasmic protein TERM 1663 1351290 - 1351279 - G 81 -7.2 -4.68545 | overlap 1351272 ACGCAATAGACAAAA CCGC TGTC GCGG ATATCAGCATGCGGG TERM 1664 1351486 - 1351518 + r 100 -15.7 -3.16039 | opp_overlap 1351495, overlap 1351473 GGCCGTGTGGTTGGT CGTTGAACAGGTGGC GTC GCCATCTGTTCAACA TTCGTACCCGTGATT ymjA 1351940 - 1351695 - | hypothetical protein TERM 1665 1352065 - 1352024 - R 100 -16 -3.12351 | gap 1, opp_overlap 1352017, overlap 1352055 TCTTTTTATAGTTAA TGGCGCGGCGCGTTACCCT CAGGC AGGATAATGCGCCGCG-CA TCCGGCTATTACGTT ycjJ 1353459 - 1352074 - | putative amino acid/amine transport protein TERM 1666 1352260 - 1352279 + g 71 -2.9 -4.81082 | gap 1, opp_overlap 1352260 1352261, overlap 1352260 1352261 CGGCATCAGCAAATA G-TGGAAG TGATC CTTCCAGC TTTTATTCATTCCTT SF1302 1355180 - 1353762 - | putative glutamine synthetase TERM 1667 1354388 - 1354398 + g 70 -5.4 -4.4009 | CCATAAAAGTGGCGT GCAT CTT ATGC TTTTCTGCCATCAGA puuD 1355380 - 1356156 + | gamma-glutamyl-gamma-aminobutyrate hydrolase ycjC 1356183 - 1356740 + | DNA-binding transcriptional repressor PuuR TERM 1668 1356825 - 1356811 - f 81 -8.5 -4.55295 | GTCGCCAGAAATAAA CGGGC ATGCA GCCCG GGGATCTCTGCGCCC TERM 1669 1357053 - 1357041 - g 74 -7.7 -4.07885 | CACCGCTGGCGAAAA TTGCC CGC GGCAA GAGCGTCGATATCGA TERM 1670 1357758 - 1357745 - g 77 -5.9 -4.59773 | opp_overlap 1357748 CCGGATCTGCAAAAA GCGGC AAGC GCCAC CGCCGCAGGCATCTT aldH 1356890 - 1358377 + | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase TERM 1671 1358840 - 1358829 - g 70 -5.8 -4.1822 | overlap 1358831 CGCTACGGCAATAAA CAGC TGGA GCTG CTGGACGTCAACGCT TERM 1672 1359363 - 1359346 - g 71 -2.7 -4.84363 | CGAAACTACTAAAAA CCTTC CCTCAGTT GAAGG GCGTGAAAATTGATT TERM 1673 1359582 - 1359604 + G 70 -11.2 -2.72511 | overlap 1359581 CATTACCCGTTCCCC GGCGGGCGCA CGC TGCGCGTGCC ATTTACCGCGATGGG ordL 1358379 - 1359659 + | oxidoreductase TERM 1674 1360554 - 1360572 + G 75 -11.6 -3.05816 | CGCGAATATTATGGA CGCGCCCG CGC CGGGCGGG TTGGGTGGCACCTAC goaG 1359697 - 1360962 + | PLP-dependent GABA aminotransferase pspF 1362059 - 1361082 - | phage shock protein operon transcriptional activator TERM 1675 1361181 - 1361195 + g 93 -8.6 -4.77438 | opp_overlap 1361180 1361183 CCCCTGTTGCAAACT GAGTTG CAG CAACTC TTTTTCCTGCTGCAT TERM 1676 1362809 - 1362799 - g 82 -3.2 -5.27335 | opp_overlap 1362802 TTCGGTAAACAAAAA TCGC TGG ACGA TCAGTTTGCCGAACT pspA 1362226 - 1362894 + | phage shock protein PspA pspB 1362948 - 1363172 + | phage shock protein B pspC 1363172 - 1363531 + | DNA-binding transcriptional activator PspC pspD 1363540 - 1363761 + | peripheral inner membrane phage-shock protein pspE 1363804 - 1364151 + | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 1677 1364168 - 1364183 + F 100 -11.8 -6.02914 | AGAATTCACCATGAG CGGCGC TTAT GCGCCG TTTTTTTTCTGTCAC insA 1365522 - 1365797 + | IS1 ORF1 TERM 1678 1367858 - 1367842 - f 73 -7.9 -4.15044 | CTGCCGGTGAATAAA GCGGTTG TCA CTACCGC CACCTGGAAAGACAA ycjO 1368123 - 1369004 + | putative binding-protein dependent transport protein ycjP 1368991 - 1369833 + | putative transport system permease protein TERM 1679 1370005 - 1369977 - g 76 -11 -3.40597 | opp_overlap 1369999, overlap 1369949 1369975 CGGCGCACCGAAACA CGGAACGGAAGT GGTCG ACTTCCGCGCCG CCAGCCCGTTTATCG ycjQ 1369864 - 1370916 + | putative oxidoreductase TERM 1680 1371860 - 1371820 - f 71 -10.3 -2.72344 | opp_overlap 1371829 CTGCACCCGCAACGA TCTGGAACTGGTGGCTGTC TGT GACAGCCGCCTTTCCCAGG CGCAGGCGCTGGCAG TERM 1681 1371829 - 1371851 + F 100 -15.6 -3.53012 | opp_overlap 1371820 CAACGATCTGGAACT GGTGGCTGTC TGT GACAGCCGCC TTTCCCAGGCGCAGG ycjT 1372770 - 1375037 + | hypothetical protein ycjU 1375034 - 1375693 + | putative beta-phosphoglucomutase TERM 1682 1376580 - 1376556 - g 79 -12.1 -3.05963 | ATCGTGATGGGAATA CGCCCGGAAGA TAT TCATCCGGACG CGCAAGAGGAAAATA ycjV 1375707 - 1376675 + | putative ATP-binding component of a transport system TERM 1683 1376813 - 1376792 - T 73 -10.1 -3.36569 | overlap 1376790 1376794 GCAATTCGCTAAATA CAGGGGGAA GGCA TTCCCCCAG GATAATACAAGGAAC TERM 1684 1376811 - 1376794 - T 77 -11.3 -3.24976 | overlap 1376792 1376790 AATTCGCTAAATACA GGGGGAA GGCA TTCCCCC AGGATAATACAAGGA TERM 1685 1377826 - 1377785 - T 95 -12.3 -3.92373 | TATCCGATCTATAAA TGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCATTCA GGCAAGGTAGCTGGT ycjW 1378842 - 1377844 - | putative LACI-type transcriptional regulator TERM 1686 1378619 - 1378609 - G 79 -4.6 -4.98522 | AACTTCAGAGAAAAA CGGA TTA CCCG CCGTAGTTTTGGTCG ycjX 1378998 - 1380395 + | putative enzyme ycjF 1380392 - 1381453 + | hypothetical protein tyrR 1381601 - 1383142 + | DNA-binding transcriptional regulator TyrR TERM 1687 1383191 - 1383137 - T 72 -8.9 -3.63862 | gap 2, opp_overlap 1383139 1383145 1383150, overlap 1383143 1383152 CAGAAGAAGAACGAA GAGTAAGCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATT-A-ACTTATGC TTTCAGTACAGCCAG TERM 1688 1383139 - 1383191 + T 86 -12.1 -3.64703 | opp_overlap 1383137 1383143 1383152, overlap 1383145 1383150 GAAGAAGAACGAAGA GTAAGCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTTATGC TTTCAGTACAGCCAG TERM 1689 1383187 - 1383143 - T 90 -13.7 -3.4382 | opp_overlap 1383139 1383145 1383150, overlap 1383137 1383152 AAGAACGAAGAGTAA GCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTT ATGCTTTCAGTACAG TERM 1690 1383145 - 1383185 + T 100 -18.5 -3.61609 | opp_overlap 1383143 1383137 1383152, overlap 1383139 1383150 GAACGAAGAGTAAGC GCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAC TTATGCTTTCAGTAC TERM 1691 1383150 - 1383180 + T 100 -21.4 -3.27601 | opp_overlap 1383143 1383137 1383152, overlap 1383145 1383139 AAGAGTAAGCGCGAA TATGCCTGATGGTG CAA CACCATCAGGCATA TTAACTTATGCTTTC TERM 1692 1383178 - 1383152 - T 100 -19.6 -3.06737 | opp_overlap 1383150 1383145 1383139, overlap 1383143 1383137 GAGTAAGCGCGAATA TGCCTGATGGTG CAA CACCATCAGGCA TATTAACTTATGCTT tpx 1383692 - 1383186 - | thiol peroxidase ycjG 1383811 - 1384776 + | putative muconate cycloisomerase I ycjI 1385479 - 1384751 - | murein peptide amidase A TERM 1693 1385460 - 1385445 - G 73 -11.8 -2.71712 | overlap 1385444 GTTCCGGGCGGAAAT GCGCCG CGTT CGGCGC GTGAGCGGGTTACGG TERM 1694 1385530 - 1385543 + r 72 -5.3 -4.63932 | TTGTGCAAATTTTGC GGATT ATCA AATCC TTTTCTTCAACGCTA TERM 1695 1385726 - 1385750 + r 73 -11.5 -2.74865 | opp_overlap 1385726, overlap 1385723 AATAAGTTTAATAAA TCGTACTGCAC ATA GTACAGTACGA TGGTATCTATATAAT TERM 1696 1385750 - 1385726 - R 100 -13.7 -4.22591 | opp_overlap 1385726 1385723 AATAAGTTTAATAAA TCGTACTGCAC ATA GTACAGTACGA TGGTATCTATATAAT SF1333 1386408 - 1385770 - | hypothetical protein SF1334 1386956 - 1386426 - | hypothetical protein TERM 1697 1386713 - 1386739 + g 70 -5 -4.4891 | ACAACATTTTTGTCG CACCTCCCGG TTGTTGC CCGCGTGGTG TTTTATAGTAGTCAG TERM 1698 1387399 - 1387374 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 1387382, overlap 1387375 1387389 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 1699 1388379 - 1388407 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SF1335 1387236 - 1388432 + | ISSfl2 ORF SF1336 1388808 - 1388578 - | hypothetical protein ycjY 1389728 - 1388808 - | hypothetical protein SF1339 1391163 - 1390345 - | IS600 ORF2 SF1340 1391501 - 1391199 - | IS600 ORF1 SF1342 1392934 - 1392029 - | insertion element IS2 transposase InsD SF1343 1393257 - 1392892 - | insertion sequence 2 OrfA protein TERM 1700 1393436 - 1393418 - H 79 -10.3 -3.6215 | opp_overlap 1393411 1393421 1393422 1393428 CTAACCCATCCCAAA CCCTTCC CTTCC GGAAGGG AGTTTCGGGATTTTG SF1344 1394096 - 1394842 + | putative replication protein SF1345 1394857 - 1395279 + | putative bacteriophage protein TERM 1701 1395403 - 1395391 - g 70 -5.5 -4.37886 | TTATTTCCGATAAAA GAGGA TGA CCCTC GTAATCAGGTTAATT SF1346 1395280 - 1395693 + | putative bacteriophage protein TERM 1702 1395779 - 1395764 - f 77 -11.8 -2.85402 | overlap 1395756 CAAATCATCAGGAGA CCGCCC GAAA GGGCGG TAATGAATGGTTACA SF1347 1395786 - 1396004 + | hypothetical protein SF1348 1396006 - 1396371 + | hypothetical protein SF1349 1396368 - 1397033 + | hypothetical protein SF1350 1397033 - 1397398 + | hypothetical protein TERM 1703 1397515 - 1397483 - T 100 -16.5 -4.15044 | opp_overlap 1397489, overlap 1397489 GTTGGGGTTAACAAA CAAAAACCCCGGA TTGATGG TCCGGGGTTTTTG AAGGAAACAAAACAG TERM 1704 1397489 - 1397509 + T 95 -11.1 -4.56597 | opp_overlap 1397483 1397489 GTTAACAAACAAAAA CCCCGGATT GAT GGTCCGGGG TTTTTGAAGGAAACA TERM 1705 1397509 - 1397489 - T 100 -9.7 -5.47159 | opp_overlap 1397489, overlap 1397483 GTTAACAAACAAAAA CCCCGGA TTGATGG TCCGGGG TTTTTGAAGGAAACA TERM 1706 1397552 - 1397528 - T 74 -3.6 -4.99947 | gap 1, overlap 1397530 TTGAAGGAAACAAAA CAGA-AACAGC AATT GCCGTTACCTG TTGTTACCATGGCAA TERM 1707 1397788 - 1397738 - T 100 -12.1 -4.64844 | gap 1 GGCAGACAGAGAAAA GCCCCAG-TTAACATTACGCGTCC TGCA AGACGCTTAACATTAATCTGAGGC CCAATCTATGTCTCA TERM 1708 1397882 - 1397867 - T 83 -9 -4.36411 | TATGAAGCAGCAAAA GGCGAT GTTA ATCGCC CTGATCGTCATCTGT TERM 1709 1398037 - 1398016 - T 74 -11.5 -2.77416 | opp_overlap 1398013 1398011 1398008, overlap 1398009 AGGAGTAAGAGACCA GGCGGGGGA GAAA TCCCTCGCC ACCTCTCATGTGTCA TERM 1710 1398092 - 1398079 - T 79 -9.5 -3.73775 | opp_overlap 1398079 CGCACCCGCACTAAA CCCGC TTCG GCGGG TTTTTTGTTGCGTGC TERM 1711 1398079 - 1398092 + T 100 -9.5 -5.4833 | opp_overlap 1398079 CGCACCCGCACTAAA CCCGC TTCG GCGGG TTTTTTGTTGCGTGC insB 1398909 - 1398514 - | IS1 ORF2 insA 1399211 - 1398936 - | IS1 ORF1 SF1353 1399345 - 1399944 + | hypothetical protein SF1354 1399944 - 1400234 + | putative bacteriophage protein TERM 1712 1400412 - 1400393 - g 81 -4.3 -5.08824 | CTGGCATCCAAAAAA TTGACGA AAACAG CCGTCAA TGAAGCCCTGCGCAG SF1355 1400231 - 1400785 + | putative bacteriophage protein TERM 1713 1400875 - 1400888 + F 100 -8.1 -5.2422 | opp_overlap 1400875 TACGGAGCGATATGA GACGC GCCC GCGTC TTTTTTCATATCGTT SF1356 1401173 - 1401475 + | IS600 ORF1 SF1357 1401511 - 1402329 + | IS600 ORF2 SF1358 1402357 - 1402725 + | hypothetical protein SF1359 1402922 - 1403293 + | putative tail fiber assembly protein TERM 1714 1403275 - 1403293 + F 73 -7.4 -4.13995 | overlap 1403278 TGAATGGCCCGCCTC TCCGGAAG GTT CTTCCTGA TTTAATTTATCGCGA SF1360 1403317 - 1404585 + | putative tail fiber protein SF1361 1404596 - 1405159 + | hypothetical protein TERM 1715 1405166 - 1405198 + T 73 -10.6 -3.10012 | gap 1, opp_overlap 1405165 1405166 GTGGAATAACAGAAG CTGCGGCACG-TCGT ATGC AGGAACGTGCCGCGG TTGGCTGGTAAACTT sitD 1406217 - 1405360 - | Iron transport protein, inner membrane component sitC 1407071 - 1406214 - | Iron transport protein sitB 1407895 - 1407068 - | Iron transport protein, ATP-binding component sitA 1408785 - 1407895 - | Iron transport protein TERM 1716 1408845 - 1408860 + H 79 -7.6 -4.4009 | opp_overlap 1408845 1408854 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCATAACC TERM 1717 1408860 - 1408845 - H 79 -7.6 -4.4522 | opp_overlap 1408845, overlap 1408854 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCATAACC insA 1409936 - 1410211 + | IS1 ORF1 insB 1410238 - 1410633 + | IS1 ORF2 ydaQ 1410989 - 1410822 - | hypothetical protein SF1370 1411705 - 1411037 - | IS629 ORF2 TERM 1718 1411604 - 1411616 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF1371 1412296 - 1411970 - | IS629 ORF1 SF1372 1413414 - 1412371 - | putative bacteriophage protein SF1373 1413794 - 1413474 - | putative host-nuclease inhibitor protein Gam TERM 1719 1413644 - 1413659 + g 70 -4 -4.60487 | gap 1, opp_overlap 1413644 AGAGCGATTCAAACA GGTGCTG AGG CAG-ACC TTTTTCCAGGTCGTC SF1374 1414510 - 1414989 + | IS600 ORF2 SF1375 1416461 - 1415037 - | putative exodeoxyribonuclease VIII TERM 1720 1415244 - 1415260 + g 88 -2.2 -5.52023 | gap 1, overlap 1415239 1415245 CTGTTCATCTGCCAT TGC-GCC AGAT GGCTGCG TTTTTTCTTCATCAT TERM 1721 1416528 - 1416554 + r 91 -7.2 -5.49809 | overlap 1416532 TCCCAGGTTCTTCAT TCAGGCCTGCAC AGT GTGCAGGCTTTC TTTTTTTCAGATTTC TERM 1722 1416532 - 1416550 + r 100 -14.6 -5.20328 | overlap 1416528 AGGTTCTTCATTCAG GCCTGCAC AGT GTGCAGGC TTTCTTTTTTTCAGA SF1376 1416836 - 1416561 - | hypothetical protein TERM 1723 1416598 - 1416611 + g 100 -3.1 -5.93809 | gap 1 ATTGCAATCAGAGTT GCCAGA AAT TC-GGC TTTTTTTTCTGCGGG kil 1417302 - 1417081 - | FtsZ inhibitor protein TERM 1724 1417135 - 1417154 + g 79 -5 -4.91109 | GAGGAAGACTTTAAT CATGCAGT CAGA AATGCATG TTTTTGTAGTCAGGC SF1378 1418284 - 1417379 - | insertion element IS2 transposase InsD SF1379 1418652 - 1418242 - | insertion sequence 2 OrfA protein TERM 1725 1418786 - 1418772 - R 72 -5.7 -4.52589 | TTTTTCCAGATAAAA CTGGA AAGTA TCCAG GGTACAGACCAGTGC SF1380 1419537 - 1418905 - | hypothetical protein TERM 1726 1419069 - 1419088 + g 70 -10 -3.18274 | TGTCGGTGTAGGTGA CGTCCTCA AAAT TGAGGGCG TTAAATTCAGGTGAG TERM 1727 1419430 - 1419417 - G 100 -5.2 -5.64274 | TTACGCATAAAAAAA CCGC TTCAGC GCGG CTATGCGCTCGAGTA TERM 1728 1420079 - 1420069 - H 80 -5.4 -4.93547 | TCAATGAAGCAAAAA CTCA GGC TGAG GTTGATCGCGCTGTG TERM 1729 1420432 - 1420422 - H 74 -5.4 -4.56597 | CCCCTCCTGTAAAAA TGAG TAT CTCA TGGACTACAATTTCA TERM 1730 1420757 - 1420730 - H 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 1731 1421097 - 1421109 + GH 73 -9.1 -3.62046 | GCTAAGCAGGCGTTA CAGCC TGG GGCTG TTGTTGCCCGGATCG SF1381 1420761 - 1421372 + | ISSfl4 ORF1 SF1382 1421321 - 1421884 + | hypothetical protein TERM 1732 1421999 - 1422022 + T 93 -10.2 -4.58395 | opp_overlap 1421996 1421995, overlap 1422001 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 1733 1422001 - 1422020 + T 100 -15 -3.90762 | opp_overlap 1421996 1421995, overlap 1421999 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_3 1423779 - 1422064 - | invasion plasmid antigen TERM 1734 1424091 - 1424059 - H 87 -10.6 -4.08919 | AAATCGTAAAGGAAA CCGTAGCACGTCGT ATGCA AGAACGTGCCACGG CTGGCTGATGGATGT insA 1424372 - 1424596 + | IS1 ORF1 insB 1424623 - 1425018 + | IS1 ORF2 SF1387 1426147 - 1426965 + | IS600 ORF2 SF1388 1427497 - 1427222 - | hypothetical protein TERM 1735 1427506 - 1427490 - G 74 -7.9 -4.12857 | opp_overlap 1427490 1427487 AACCAGGACAAATAA CCCGCCA TGC CGACGGG TTCTTTTTGGATCAG TERM 1736 1427490 - 1427506 + g 70 -5 -4.44608 | opp_overlap 1427490, overlap 1427487 AACCAGGACAAATAA CCCGCC ATGCC GACGGG TTCTTTTTGGATCAG SF1389 1427754 - 1427518 - | hypothetical protein TERM 1737 1427740 - 1427729 - G 70 -7.2 -4.13767 | TCGTCGATTTCAAAA GCGC CTAT GCGC ACACTGGTTTTCATC yebU 1429311 - 1428046 - | putative nucleolar proteins TERM 1738 1428666 - 1428676 + g 71 -2.4 -5.02074 | TTTCCTGATTGCTTT CGGG TGA CCAG TTTTTTAGCGCATCG TERM 1739 1429239 - 1429229 - G 70 -4 -4.63932 | CAGGCGGCAAGAAAA TCAT CAA ATGA GAGCGTCGAAGGCAT TERM 1740 1429384 - 1429357 - R 79 -11.2 -3.41602 | opp_overlap 1429351, overlap 1429358 CGCAGTTTAGCATAA GCGCTCCGGCGC AGGC ACGCCGGAGCAG TGGGCATTATTTGGG TERM 1741 1429383 - 1429358 - R 86 -14.7 -2.64747 | opp_overlap 1429351, overlap 1429357 GCAGTTTAGCATAAG CGCTCCGGCGC AGGC ACGCCGGAGCA GTGGGCATTATTTGG TERM 1742 1429435 - 1429456 + r 74 -8.1 -3.85389 | gap 1, overlap 1429439 GCCACTCTTTCGGTT CACTTTCCTG CAA CAGGAA-GTG TTTGCCTTCTTGGGC SF1392 1433263 - 1431980 - | hypothetical protein TERM 1743 1432178 - 1432160 - G 77 -8.8 -4.08111 | overlap 1432162 TAAAGATATGACAAA CAGGTCGA GTA TCGACCAG CGTCCAATCCAGGTC TERM 1744 1432176 - 1432162 - G 77 -10 -3.61777 | overlap 1432160 AAGATATGACAAACA GGTCGA GTA TCGACC AGCGTCCAATCCAGG TERM 1745 1432911 - 1432901 - G 74 -3.2 -4.94222 | AATAACGCAGAAAAA GACC ATT GATC CCGTTATCGCATCGC TERM 1746 1433024 - 1433002 - G 70 -9.8 -3.14125 | overlap 1433000 GCCAGATATGCAACA GCGGTTCGCC CCA GGCAAACGGC ATAAGCAACAGCATG TERM 1747 1433075 - 1433091 + g 70 -3.6 -4.65895 | overlap 1433076 GCGCGTTAGCGACCA GTCGCG CCCGT CGCGAA TTTTTGCCTGACAGC TERM 1748 1433321 - 1433345 + H 72 -6.6 -4.26903 | opp_overlap 1433332 TGATGGGAATGATCT TGAGCATTAA CGCAT TTAATGCTTA TTTTAATAGGCTGGC SF1393 1433393 - 1433890 + | hypothetical protein TERM 1749 1434395 - 1434383 - f 71 -6.9 -4.06419 | overlap 1434386 GCTGGTGAGAAAGAA GACGC ACC GCGCC GCGAACGCAAGCCAC yebJ 1434566 - 1434685 + | hypothetical protein TERM 1750 1435057 - 1435072 + G 77 -8.2 -4.14392 | opp_overlap 1435056 1435055, overlap 1435058 ACGATCTCTACAATC TGGCGC AAAA GCGCCG TTTTGAACGTTACCA TERM 1751 1435130 - 1435112 - g 74 -8.1 -4.13767 | GTCGGTACTGGAAAA GCCGATG GATTT CACCGGC AACGACACTTATAAC prc 1434705 - 1436753 + | carboxy-terminal protease TERM 1752 1436783 - 1436760 - f 90 -14 -3.42147 | opp_overlap 1436760 GTCAAGTAATATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1753 1436760 - 1436783 + F 100 -14 -5.00616 | opp_overlap 1436760 GTCAAGTAATATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1754 1436905 - 1436915 + F 80 -6.8 -4.65916 | opp_overlap 1436891, overlap 1436881 1436880 1436893 ATACGATGTGGGTAT CGCA TAT TGCG TTTTGTTAAACTGAG htpX 1436948 - 1437826 + | heat shock protein HtpX TERM 1755 1437872 - 1437841 - T 76 -11.7 -2.74026 | opp_overlap 1437847, overlap 1437847 ATATGAAGTAAATAC TAAAAAGCGCGTC CTGATC GACGCGCTTTTTT TATGCCCTGGCTCGT TERM 1756 1437847 - 1437866 + T 100 -10.7 -5.626 | opp_overlap 1437841 1437847 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG TERM 1757 1437866 - 1437847 - T 100 -10.7 -4.946 | opp_overlap 1437847, overlap 1437841 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG SF1397 1439356 - 1437872 - | putative transport protein SF1398 1439422 - 1440213 + | putative regulator TERM 1758 1440223 - 1440253 + T 77 -6.9 -4.44046 | opp_overlap 1440223 1440226 TTCTGATGAGAGTAA GAACCTGTCGG AATATCAAA CAGACAGGTTC TTTATTTAGCATGAG SF1399 1440595 - 1440356 - | hypothetical protein SF1400 1440754 - 1440897 + | hypothetical protein SF1401 1440972 - 1441259 + | hypothetical protein TERM 1759 1441273 - 1441304 + F 71 -9.6 -3.25729 | gap 1, opp_overlap 1441281 AATCCTTCCTCAATC TTGAGTAACCCCGTC GTT GAAGG-GTTACTCAA TTCATCCTGATTATA SF1402 1441929 - 1442072 + | hypothetical protein cspC 1442085 - 1442294 + | cold shock-like protein CspC TERM 1760 1442271 - 1442287 + F 70 -9.5 -2.94747 | opp_overlap 1442262 CAGAAAGGTCCGGCA GCTGTTA ACG TAACAGC TATCTGATCGAATCC TERM 1761 1442343 - 1442361 + F 88 -8.1 -4.85177 | opp_overlap 1442343 CAATCTCGCTATAAA GCCTCGT CGAAT GCGAGGC TTTTTACTATGCTTT TERM 1762 1442361 - 1442343 - f 71 -7.4 -3.86822 | opp_overlap 1442343 CAATCTCGCTATAAA GCCTCG TCGAATG CGAGGC TTTTTACTATGCTTT rrmA 1442460 - 1443269 + | 23S rRNA methyltransferase A SF1405 1443808 - 1443266 - | hypothetical protein TERM 1763 1443522 - 1443538 + g 73 -11.5 -2.55437 | opp_overlap 1443522, overlap 1443521 1443519 ACCAGTAGCCAGAAA CCGTGCC GAC GGCGCGG CTCTTCATCTTCATC TERM 1764 1443538 - 1443522 - G 78 -9.3 -3.93963 | opp_overlap 1443521 1443519 1443522 ACCAGTAGCCAGAAA CCGTGCC GAC GGCGCGG CTCTTCATCTTCATC TERM 1765 1444252 - 1444201 - R 73 -9.8 -3.42364 | gap 1, opp_overlap 1444199 1444203, overlap 1444199 AGGGAAGAGATAATA TAGCCTAAGCTATGTCTGAT-TATT AAA AATACACTAAACATAGCTTTGGCTA AATTCATAAGTTATT insB 1444691 - 1444296 - | IS1 ORF2 insA 1444993 - 1444718 - | IS1 ORF1 SF1408 1445498 - 1445022 - | hypothetical protein TERM 1766 1445518 - 1445537 + r 71 -10.6 -2.62396 | opp_overlap 1445519 CCTCCAGATAAAAAA ACGGGGCC AAAA GGCCCCGG TAGTGTACGACAGTC TERM 1767 1445536 - 1445519 - R 100 -14.1 -5.71712 | opp_overlap 1445518 CTCCAGATAAAAAAA CGGGGCC AAAA GGCCCCG GTAGTGTACGACAGT manZ 1446413 - 1445553 - | mannose-specific PTS system protein IID TERM 1768 1446354 - 1446368 + g 82 -2.8 -5.28778 | opp_overlap 1446355, overlap 1446355 GAATACGCCACGAAT ATCACT TTG AGTGAG TTTTTTCTCGGTGGT manY 1447217 - 1446417 - | PTS enzyme IIC manX 1448251 - 1447280 - | PTS enzyme IIAB TERM 1769 1447818 - 1447843 + g 100 -12.5 -4.58685 | GGAGCCGCTTTTGGT GCTGCGGCAGC GGGT GCTGGCGCGGC TTTTTCAACCGGTTT TERM 1770 1448496 - 1448519 + H 72 -8.2 -3.67588 | opp_overlap 1448500 AAGGTAAATCTTTGC CAAATCAGAG GCGT CTCTGATATG TTTAACTCCCGTTTA TERM 1771 1449878 - 1449889 + G 72 -5.8 -4.35483 | overlap 1449855 GGCGTGCTGCGTCGC GCTC GCGG GAGC TTTGTTATCGTGACC yoaE 1448714 - 1450264 + | putative transport protein TERM 1772 1450309 - 1450277 - T 71 -9.9 -3.18199 | opp_overlap 1450285 1450305, overlap 1450266 1450265 TAAGCGTTAACGTAA CGACATAATGGGCGT GAT ATGTCCATTATGCCG GGCGGGCGGCGGTTG SF1413 1451866 - 1450268 - | hypothetical protein TERM 1773 1450305 - 1450339 + g 100 -14.9 -3.54424 | opp_overlap 1450277 GTGATATGTCCATTA TGCCGGGCGGGCGGC GGTTG GCTGCCCGCCAGCCA TTTGGGAAAATCACG TERM 1774 1451987 - 1451961 - R 95 -13 -3.88583 | overlap 1451962 GAAAGCGGGTATAAA TTCGCCCATCCG TTG CAGATGGGCGAG TAAGAAGTATTAGTC TERM 1775 1451986 - 1451962 - R 100 -16.5 -2.92668 | overlap 1451961 AAAGCGGGTATAAAT TCGCCCATCCG TTG CAGATGGGCGA GTAAGAAGTATTAGT sdaA 1453361 - 1451997 - | L-serine deaminase yeaB 1454123 - 1453545 - | hypothetical protein pabB 1455488 - 1454127 - | para-aminobenzoate synthase component I TERM 1776 1454418 - 1454407 - G 72 -5.8 -4.3129 | opp_overlap 1454407, overlap 1454408 GAGCCACCAGGAAAA GCTG CGCG CAGC AGATCGCTGGCGTGT TERM 1777 1454723 - 1454712 - G 70 -3.6 -4.63952 | ATCACAAAGAATAAA CCGC TCTG GCGA AAGGCTTAAAATTGC TERM 1778 1454774 - 1454761 - G 83 -5.2 -5.1615 | TCAAGACGTAAAAAA GCGC TAAATG GCGC GCGGTTGGCCTGATT TERM 1779 1455382 - 1455354 - G 72 -8.1 -3.98159 | overlap 1455355 GACCACAATATCAAA GCGGCTATACGGA TGA TCGGCATAGCCGG AGTGTAAAAGCATCG TERM 1780 1455381 - 1455355 - G 75 -11.6 -2.98173 | overlap 1455354 ACCACAATATCAAAG CGGCTATACGGA TGA TCGGCATAGCCG GAGTGTAAAAGCATC SF1417 1455562 - 1455741 + | hypothetical protein TERM 1781 1455831 - 1455801 - T 100 -11.3 -4.84359 | TGATTGTGAGAAAAA GGACGCTTTTTAT ATGTG ATTAAAAGCGTCC TGACCCATTTATGCT SF1418 1456220 - 1455861 - | hypothetical protein TERM 1782 1456504 - 1456530 + r 71 -9.5 -3.25668 | overlap 1456503 GTAATATCTTATTCT CTGGTCGATTT ATGTA AAACCGACCAG TATTATCGATAAATT SF1419 1456968 - 1456576 - | hypothetical protein TERM 1783 1457873 - 1457893 + G 72 -6.1 -4.3467 | AAAGTGCGCTGATCG TCTTGCCCA GAG TGCGCAGGA TTTTCGTCTGCAACT TERM 1784 1458440 - 1458451 + G 72 -4.4 -4.64846 | opp_overlap 1458440 GATCATCGAAGCTAA CAAC GGTC GTTG TTTTATGCTTTGTAC SF1420 1457052 - 1458962 + | putative enzyme yeaZ 1459020 - 1459715 + | hypothetical protein SF1422 1459755 - 1460336 + | putative outer membrane protein TERM 1785 1460390 - 1460352 - f 100 -24.9 -3.53012 | opp_overlap 1460355 1460363, overlap 1460355 1460363 TTGCTTGTTTTTAAA GAATGCAGAAACAGCGG CTGGT CCGCTGTTTCTGCATTC TTACGGTAAAGATAA TERM 1786 1460355 - 1460387 + F 100 -20.8 -3.65046 | opp_overlap 1460352 1460355 1460363, overlap 1460363 CTTGTTTTTAAAGAA TGCAGAAACAGCGG CTGGT CCGCTGTTTCTGCA TTCTTACGGTAAAGA TERM 1787 1460387 - 1460355 - f 100 -20.8 -3.90744 | opp_overlap 1460355 1460363, overlap 1460352 1460363 CTTGTTTTTAAAGAA TGCAGAAACAGCGG CTGGT CCGCTGTTTCTGCA TTCTTACGGTAAAGA TERM 1788 1460379 - 1460363 - f 79 -9.4 -4.0386 | opp_overlap 1460363 1460355, overlap 1460355 1460352 TAAAGAATGCAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCTTAC TERM 1789 1460363 - 1460379 + F 79 -9.4 -4.02253 | opp_overlap 1460355 1460352 1460363, overlap 1460355 TAAAGAATGCAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCTTAC TERM 1790 1461497 - 1461509 + G 72 -7.7 -3.91144 | opp_overlap 1461496 1461493, overlap 1461500 1461501 TGAACAATAAAGAGT TCCAG CAG CTGGA TTTCTCCAGTCTGCA TERM 1791 1462074 - 1462085 + G 70 -4.4 -4.57569 | opp_overlap 1462074 ATCGCTTACCGAAGA GTCA CTGG TGAC TTTTTGCCGCCGTCA fadD 1460476 - 1462227 + | long-chain-fatty-acid--CoA ligase TERM 1792 1462248 - 1462264 + F 100 -10.8 -5.75342 | opp_overlap 1462239, overlap 1462237 AAGTCAGTCGTCAGA CGCCGG TTAAT CCGGCG TTTTTTTTGACGCCC rnd 1462309 - 1463424 + | ribonuclease D TERM 1793 1463477 - 1463427 - T 95 -12.5 -4.26344 | opp_overlap 1463436 ATATCCGCAGTAAAA TCTTCCGAAGCCGGACTGGGCGC GCTCA GCGCCACATCCGGCTTTGGCAAA CTACAAATCCAACAC TERM 1794 1463436 - 1463468 + T 86 -12.1 -3.54424 | opp_overlap 1463427 GTAAAATCTTCCGAA GCCGGACTG-GGCGC GCTCA GCGCCACA-TCCGGC TTTGGCAAACTACAA yeaX 1464443 - 1463478 - | putative diogenase beta subunit TERM 1795 1464199 - 1464189 - G 88 -8.2 -4.65895 | opp_overlap 1464196 1464196 CTGCTGATGCAAAAA GCGG GAA CCGC CGCGCGAGTTTTCTT TERM 1796 1464478 - 1464463 - R 73 -4.6 -4.7373 | opp_overlap 1464468 1464469, overlap 1464466 1464467 GTACTCCATCAAAAA TCAGCC CAGC GGCGGA AAATACCGCCGCCGA SF1427 1466024 - 1465458 - | putative repressor protein TERM 1797 1466030 - 1466040 + H 75 -3.2 -5.1517 | overlap 1466017 1466024 CCGGGGGCATAAAAA TGCG CTC TGCA TTTTTGCTTTCTTTT SF1428 1466391 - 1466693 + | IS600 ORF1 SF1429 1466729 - 1467547 + | IS600 ORF2 TERM 1798 1468203 - 1468233 + T 78 -4.8 -5.03314 | gap 1, opp_overlap 1468209, overlap 1468204 1468205 1468209 TTAACGCTTAAATTG CA-CAAAGGCTGC ACACAG GCAGCCTTTGCTA TTTTTTAGAGGTGAC TERM 1799 1468204 - 1468231 + T 83 -9.9 -4.14633 | opp_overlap 1468209, overlap 1468203 1468205 1468209 TAACGCTTAAATTGC ACAAAGGCTGC ACACAG GCAGCCTTTGC TATTTTTTAGAGGTG TERM 1800 1468205 - 1468230 + T 82 -13.4 -3.08056 | opp_overlap 1468209, overlap 1468204 1468203 1468209 AACGCTTAAATTGCA CAAAGGCTGC ACACAG GCAGCCTTTG CTATTTTTTAGAGGT TERM 1801 1468226 - 1468209 - T 74 -8.4 -3.95219 | opp_overlap 1468205 1468204 1468203 1468209 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG TERM 1802 1468209 - 1468226 + T 76 -8.4 -4.18668 | opp_overlap 1468209, overlap 1468205 1468204 1468203 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG yeaP 1469483 - 1468458 - | hypothetical protein yoaF 1469666 - 1469920 + | hypothetical protein yeaO 1470310 - 1469942 - | hypothetical protein TERM 1803 1469969 - 1469993 + g 86 -6.5 -5.1675 | gap 1 TAGCCAGTCGGCCAG CACCAGCGCA TGGTTC TGCG-TGGTG TTTTTTGCTGCGTAG yeaN 1471524 - 1470463 - | putative amino acid/amine transport protein TERM 1804 1471432 - 1471420 - G 74 -10.5 -3.1876 | AATCGTATCCAGTAA CGGCG CTG CGCCG GTAAAGGTGACGCGT yeaL 1472842 - 1472396 - | hypothetical protein SF1436 1472964 - 1473116 + | hypothetical protein yeaK 1473620 - 1473117 - | hypothetical protein TERM 1805 1474398 - 1474381 - H 70 -9.9 -3.06492 | opp_overlap 1474361 CGATCGATGCCAATA CTTCCTG ACTG CAGGAAG GACCAGTTATTCATC SF1439 1474805 - 1475107 + | IS600 ORF1 SF1440 1475143 - 1475961 + | IS600 ORF2 yeaF 1476368 - 1477114 + | hypothetical protein TERM 1806 1477150 - 1477166 + F 100 -13.7 -4.2803 | opp_overlap 1477150 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG TERM 1807 1477166 - 1477150 - f 100 -13.7 -4.82901 | opp_overlap 1477150 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG SF1442 1477204 - 1477965 + | putative aldehyde reductase yeaD 1478900 - 1478016 - | hypothetical protein TERM 1808 1478957 - 1478940 - R 100 -11.3 -5.82316 | opp_overlap 1478940 ATCAGGTAAAAAAAA GAGCGAC CGAA GTCGCTC TTTTTAGATCACAGT TERM 1809 1478940 - 1478957 + r 95 -11.3 -4.66163 | opp_overlap 1478940 ATCAGGTAAAAAAAA GAGCGAC CGAA GTCGCTC TTTTTAGATCACAGT gapA 1479979 - 1478984 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1810 1480051 - 1480035 - H 72 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT yeaA 1480321 - 1480734 + | methionine sulfoxide reductase B SF1446 1480776 - 1481048 + | hypothetical protein TERM 1811 1481537 - 1481520 - g 77 -8.3 -4.08485 | GTGACTGAAATTAAA GCCGCGG CAAT CTGCGGC GCAGACATGAAGCAC SF1447 1481418 - 1482494 + | putative oxidoreductase TERM 1812 1482549 - 1482539 - g 71 -2.4 -4.90002 | GAACAGATAACAAAA CCGC ATT GTGG TGCACGGCTGGATCG TERM 1813 1483214 - 1483202 - g 78 -9.1 -3.9093 | CGGAGTATAGAAGAA GGCGT CAT ACGCC AGACGGGTAAACCTT SF1448 1482521 - 1483900 + | putative transport protein SF1450 1484983 - 1485819 + | putative aldolase SF1451 1485824 - 1486771 + | putative kinase TERM 1814 1487017 - 1487003 - g 86 -4.2 -5.41143 | CAGGCGTTAAAAAAA CTGCCC CGT GAACAG GTTGTAGTAGAAACC TERM 1815 1487132 - 1487104 - g 78 -5.2 -4.84359 | GCAGTTGTATAAAAA CCTTTCCCCGGA ATCTA TCCGCGAAGAGG TAGAAGCCAGCTTGC TERM 1816 1487189 - 1487206 + G 74 -3.3 -5.0133 | ATCTATATGACGCAC TGGCAGT CGGT GCCGCCA TTTTTTACGCCGATA TERM 1817 1487557 - 1487567 + G 70 -6.8 -4.03093 | opp_overlap 1487557 TGATATGCTTGAACA GTGG CAG CCAC TTTGTGCTCGTTATC SF1452 1486826 - 1487761 + | hypothetical protein SF1453 1487898 - 1488656 + | putative DEOR-type transcriptional regulator TERM 1818 1488718 - 1488739 + F 73 -10.9 -2.56591 | opp_overlap 1488716 1488718, overlap 1488717 AAATGATGATAAAGA TGCGGCAAG TGAA TTTGCCGCA ATTGCTACCTTTTAT TERM 1819 1488739 - 1488718 - f 79 -10.2 -3.60538 | opp_overlap 1488718 1488717, overlap 1488716 AAATGATGATAAAGA TGCGGCAA GTGAAT TTGCCGCA ATTGCTACCTTTTAT TERM 1820 1489263 - 1489285 + G 100 -4.8 -5.63103 | CCCATGCTGTCTGCG GCGATAGGCG TGG TGGTTATCGC TTTTTTTAGTTGGCG ydjE 1488774 - 1490132 + | putative transport protein ydjB 1490866 - 1490225 - | nicotinamidase/pyrazinamidase ansA 1491893 - 1490877 - | cytoplasmic asparaginase I TERM 1821 1491114 - 1491140 + g 73 -3.7 -4.77173 | overlap 1491116 AATACCGCGATCGCT GGCTTCTTGTA ATTCC TGCAGGAAGGC TTTGTTTTGTGGCGC TERM 1822 1492050 - 1492021 - R 100 -9.4 -5.08824 | gap 1, overlap 1492024 1492025 CGTCGAGGTAAAAAA TAATGTGGCCGAC GATCT GTCGGCCAC-TCA GTACAAGACTTAACG TERM 1823 1492048 - 1492024 - R 95 -11.4 -4.64763 | overlap 1492021 1492025 CGAGGTAAAAAATAA TGTGGCCGAC GATCT GTCGGCCACT CAGTACAAGACTTAA TERM 1824 1492047 - 1492025 - R 93 -14.9 -3.37773 | overlap 1492024 1492021 GAGGTAAAAAATAAT GTGGCCGAC GATCT GTCGGCCAC TCAGTACAAGACTTA sppA 1493916 - 1492060 - | protease 4 TERM 1825 1493906 - 1493887 - G 77 -2.8 -5.08824 | overlap 1493889 CGTCCATTTAAAAAA TCCGGCAA TAAA TCGCCAAA GGGTTCGCATGTATT ydjA 1494095 - 1494628 + | hypothetical protein selD 1494745 - 1495788 + | selenophosphate synthetase TERM 1826 1496216 - 1496167 - g 77 -8.5 -4.13945 | gap 1, opp_overlap 1496173 1496212, overlap 1496168 ACTGGCACCGGAAAA GCGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCGG TTGAGCGGGCGATCG TERM 1827 1496215 - 1496168 - g 75 -12 -3.08046 | gap 1, opp_overlap 1496173 1496212, overlap 1496167 CTGGCACCGGAAAAG CGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCG GTTGAGCGGGCGATC TERM 1828 1496936 - 1496923 - g 74 -3.1 -4.91109 | gap 1 TTGGGATGACAAAAA GGT-CG ATG CGCACC ACGCCATCATCCCGA topB 1495793 - 1497754 + | DNA topoisomerase III TERM 1829 1497795 - 1497825 + G 100 -4.8 -5.47821 | AGTCATATTCTGAAA TATCCAGCGGAT CAAGAAA GTTCGTTGGATA TTTTTTTGCATGGAT TERM 1830 1497904 - 1497890 - g 79 -3.6 -5.16237 | AATGTGATGAAAAAA GTTTTA TTG CAAAAC CATCCTGGGAGCGAG ynjI 1497770 - 1498921 + | hypothetical protein gdhA 1500204 - 1499038 - | glutamate dehydrogenase SF1463 1500330 - 1500695 + | insertion sequence 2 OrfA protein SF1464 1500653 - 1501558 + | insertion element IS2 transposase InsD TERM 1831 1502077 - 1502100 + G 93 -12.4 -3.87815 | overlap 1502067 CAGGCGGGCAGTCAG CGCAGCCCTG TACT CAGTGCTGCG TTTATCAGGATCAAA SF1465 1501953 - 1502225 + | hypothetical protein SF1466 1502598 - 1502191 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase TERM 1832 1502839 - 1502856 + G 75 -5.5 -4.63218 | CGCTGGGCTGGTATC TGGCGGC GCTA GTCGTCA TTTTGTTGAACAGGC TERM 1833 1503276 - 1503302 + G 95 -15.2 -2.75803 | GTGTGGAGTGGGTAT CTGACGCTGAAG TCG CTCCAGCGTCAG TAATTGCAATGTTAT SF1467 1502685 - 1503305 + | putative cytochrome oxidase TERM 1834 1503341 - 1503356 + T 79 -4.6 -5.09895 | overlap 1503342 GCCCGGGCCGCGTTC ACCGGT TGCA ACCGGA TTTTTTGGATCGCTG TERM 1835 1503955 - 1503970 + T 71 -6.8 -4.08767 | opp_overlap 1503943 1503946 GAATGACCGTGGTGT CATGGC GAAT GCCGTG TTTTGCCAGCATCGC TERM 1836 1504187 - 1504207 + T 73 -4.5 -4.82901 | opp_overlap 1504189, overlap 1504189 CCATTGCGGATAAAC CAGCTGCTC AAA GTGCGGCAG TTTTTGTAGACGGGA SF1469 1505341 - 1504688 - | putative ATP-binding component of a transport system TERM 1837 1506137 - 1506148 + H 74 -7.2 -4.22748 | CATCAGCAGCAGACT GGCG AGTG CGCC TTTCGTTTGTTGATC TERM 1838 1506325 - 1506339 + H 74 -5.6 -4.67353 | opp_overlap 1506324, overlap 1506327 ATCCAGCACAATGAC CTGCTG CAA CAGCCG TTTTTCGCTCAATAC TERM 1839 1506902 - 1506916 + H 80 -7.1 -4.59773 | TTGCAATATTTCGCG CTGCC CGTCA GGCAG TTTTTGCGGATCGAG TERM 1840 1507113 - 1507125 + H 100 -9.1 -5.14965 | opp_overlap 1507113, overlap 1507104 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1841 1507125 - 1507113 - H 72 -9.1 -3.53012 | opp_overlap 1507104 1507113 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1842 1507592 - 1507545 - H 72 -4.9 -4.65895 | gap 2, opp_overlap 1507580 GTCGGCACTGAAAAA TCTCCCCGCACCGGCAGCTGTGT GTCG ACATAGC-GCCAGTT-GGGCAGA GTCTCCGCCCAGCCC TERM 1843 1507686 - 1507717 + H 100 -13.9 -4.4017 | opp_overlap 1507689 CCAGTGGCTGTGTAA GAATCCGGAAACG CTCACT TGTTTCCGGATTC TTTTATGCACATTGG TERM 1844 1507714 - 1507689 - H 72 -9.1 -3.61398 | opp_overlap 1507686 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTCTTTTATGCACAT SF1471 1507704 - 1509050 + | IS4 orf TERM 1845 1509061 - 1509032 - T 89 -9.3 -4.59109 | opp_overlap 1509029 1509026 1509033 1509034, overlap 1509034 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCTTTTAAGGTG TERM 1846 1509033 - 1509060 + T 88 -12.8 -3.54181 | opp_overlap 1509032 1509034, overlap 1509029 1509026 1509034 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCTTTTAAGGT TERM 1847 1509059 - 1509034 - T 100 -16.3 -3.90762 | opp_overlap 1509033 1509029 1509026 1509034, overlap 1509032 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCTTTTAAGG TERM 1848 1509034 - 1509059 + T 90 -16.3 -2.71785 | opp_overlap 1509034 1509032, overlap 1509033 1509029 1509026 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCTTTTAAGG TERM 1849 1509320 - 1509334 + T 70 -10 -3.06696 | TCATTTTTAATTTCC TGCCAG TCA CTGGCA TGTGTTGCCAAAGAA ynjA 1509897 - 1509400 - | hypothetical protein ydjZ 1510651 - 1509947 - | hypothetical protein TERM 1850 1510333 - 1510316 - G 88 -5.5 -5.24129 | gap 1, overlap 1510319 1510321 TCTGGCGATAAAAAA GCACAGCG CCG CGCCG-GC CATCGAACTGGTCCA TERM 1851 1510580 - 1510550 - G 86 -11.1 -3.91897 | overlap 1510570 GCTGCGATTGATAAA CTCATGGACGCCG GGAAG CAGCGCCCATGCG AGCAGCATAGCGAAC ydjY 1511508 - 1510669 - | hypothetical protein TERM 1852 1510825 - 1510835 + gr 71 -2.4 -4.92791 | GCTATCCAGACACAC CAGG CAA CCCG TTTTCTTCTCTTCTG ydjX 1512061 - 1511351 - | hypothetical protein xthA 1513034 - 1512228 - | exonuclease III TERM 1853 1512812 - 1512798 - G 73 -9.2 -3.57144 | opp_overlap 1512801 1512803 GTCGTCACCGGGAAA GCCGCG ACG CACGGC AATCGGCGTCTCTTT TERM 1854 1513176 - 1513194 + H 74 -11 -2.92792 | overlap 1513173 CGCTTTTGGTGCGCG CTGCGTCA GAA TGGCGCAG TAATTTCCAGTAAAT TERM 1855 1514210 - 1514265 + H 79 -10.3 -3.61398 | gap 1, opp_overlap 1514228 1514236, overlap 1514200 TGCACTACGGCGTGA CGC-CCGATCTGTTAACCACCGCCAA AGCGC TGGGCGGCGGTTTCCCGGTCGGTGCG TTGTTGGCAACCGAA TERM 1856 1515053 - 1515071 + G 79 -10.2 -3.85698 | opp_overlap 1515046 CGATCACACCGGCAG CAGCGAGC TGT GCACGCTG TTTCTCGACCCGGAC TERM 1857 1515408 - 1515391 - g 77 -9.8 -3.5944 | AGGTACATCCGCAAA CCGCGC CTGCCC GCGCGG TGCTGGAGAAAGAAG TERM 1858 1515597 - 1515634 + G 70 -6.1 -4.19735 | gap 1, opp_overlap 1515588 AATTATCACCATTTC CGCGTGG-TGCTGGCGCG TAC CGATCCGGCAACCGAGCG TTTGATTTTAACCGC SF1479 1514700 - 1515731 + | arginine succinyltransferase TERM 1859 1516121 - 1516147 + G 100 -14.4 -3.56821 | opp_overlap 1516095 GCGGCGAGCCTGCGA CATCGCCCGCAC GGC GTGCTGGCGGTG TTTGGGCCGTATAAT SF1480 1515728 - 1517149 + | succinylglutamic semialdehyde dehydrogenase TERM 1860 1517640 - 1517655 + F 72 -4.7 -4.56597 | opp_overlap 1517640 GCGCCCGTCACTGAA TCGCT GTTAAA AGCGA TTTTTAAGGACGAAG TERM 1861 1518340 - 1518320 - f 71 -6.8 -4.06864 | TTGACAGAAGAAGAA CGCCGG GCGGTGAAT CCGGCG GTGATGATGAACGAT TERM 1862 1518580 - 1518567 - f 76 -4.5 -5.055 | opp_overlap 1518556, overlap 1518568 TTAACGGGTAAAAAA CCGGT TATC ACCGA GCGAGAAATCAACGG ydjS 1518624 - 1519496 + | succinylglutamate desuccinylase TERM 1863 1519538 - 1519489 - f 74 -3.5 -5.03145 | opp_overlap 1519492 1519501, overlap 1519492 1519497 1519499 1519500 TAATGCTCGAAAAAA TAAGCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGCTTT CTTATAAATTAATAC TERM 1864 1519535 - 1519492 - f 72 -5.2 -4.61482 | opp_overlap 1519492 1519501, overlap 1519489 1519497 1519499 1519500 TGCTCGAAAAAATAA GCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGC TTTCTTATAAATTAA TERM 1865 1519527 - 1519500 - f 78 -12.8 -2.53642 | opp_overlap 1519492 1519501, overlap 1519499 1519497 1519492 1519489 AAAATAAGCTAATAC TTACCCGCAGAA ATCA TTCTGCGGGTAT TAAGTTGCTTTCTTA TERM 1866 1519501 - 1519526 + F 100 -16.3 -3.2827 | opp_overlap 1519500 1519499 1519497 1519492 1519489, overlap 1519492 AAATAAGCTAATACT TACCCGCAGAA ATCA TTCTGCGGGTA TTAAGTTGCTTTCTT spy 1519826 - 1520311 + | periplasmic protein TERM 1867 1520387 - 1520333 - f 86 -12.1 -3.52779 | opp_overlap 1520335, overlap 1520335 AGCCAAAAAACTTAA GACCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGGTT TTCTTTTCTCTTCTC TERM 1868 1520385 - 1520335 - f 93 -14.7 -3.3244 | opp_overlap 1520335, overlap 1520333 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC TERM 1869 1520335 - 1520385 + F 100 -19.8 -5.26907 | opp_overlap 1520333 1520335 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTTG CAG TAATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC SF1484 1520514 - 1521089 + | hypothetical protein SF1485 1521936 - 1521049 - | nucleotide excision repair endonuclease TERM 1870 1521596 - 1521612 + g 70 -6.5 -4.15044 | AGGGCACAGAGCTGG CGATTGC GGC GCAACCG TTTATTAAACAGCGG TERM 1871 1522094 - 1522135 + r 84 -8.7 -4.57569 | opp_overlap 1522097 1522100 1522101, overlap 1522097 1522101 ATAGTTTTGTAGGTA GAATAAGGCGTTCACGCCG CATC CGGCGTGAACAAATTACTC TTTTTCGCACAATCC TERM 1872 1522132 - 1522097 - R 79 -11.2 -3.35679 | opp_overlap 1522094 1522097 1522101, overlap 1522100 1522101 GTTTTGTAGGTAGAA TAAGGCGTTCACGCCG CATC CGGCGTGAACAAATTA CTCTTTTTCGCACAA TERM 1873 1522129 - 1522100 - R 72 -8.5 -3.8211 | opp_overlap 1522097 1522094 1522101, overlap 1522097 1522101 TTGTAGGTAGAATAA GGCGTTCACGCCG CATC CGGCGTGAACAAA TTACTCTTTTTCGCA TERM 1874 1522128 - 1522101 - R 77 -12 -2.88945 | opp_overlap 1522101 1522097 1522094, overlap 1522100 1522097 TGTAGGTAGAATAAG GCGTTCACGCCG CATC CGGCGTGAACAA ATTACTCTTTTTCGC nadE 1522993 - 1522166 - | NAD synthetase TERM 1875 1522955 - 1522967 + g 72 -4.7 -4.69324 | overlap 1522956 ATTAATCTGCGGTTT TGCGC CCA GCGCC TTTATTATTTGTTGT osmE 1523195 - 1523533 + | DNA-binding transcriptional activator OsmE TERM 1876 1523568 - 1523583 + F 100 -7.5 -5.78622 | opp_overlap 1523568 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTTGGCCTGA TERM 1877 1523583 - 1523568 - f 71 -7.5 -3.8646 | opp_overlap 1523568 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTTGGCCTGA celA 1523832 - 1524152 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB celB 1524237 - 1525586 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC celC 1525645 - 1525995 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 1878 1526112 - 1526100 - T 71 -3.4 -4.79352 | TTATCTATAACAAAA CTGA GAGTA TCAG CGGACTGCATCAGCA insB 1527090 - 1526695 - | IS1 ORF2 insA 1527392 - 1527117 - | IS1 ORF1 celF 1527727 - 1529079 + | cryptic phospho-beta-glucosidase; cryptic ydjC 1529092 - 1529850 + | hypothetical protein TERM 1879 1529855 - 1529895 + T 72 -9.2 -3.5394 | gap 2, opp_overlap 1529855 1529856, overlap 1529857 1529863 TTGATGTGTAAGTAA GGTGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCATA TTTACGCCGGAATTT TERM 1880 1529894 - 1529856 - T 71 -10.5 -2.60723 | gap 2, opp_overlap 1529855 1529857 1529863, overlap 1529855 TGATGTGTAAGTAAG GTGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCAT ATTTACGCCGGAATT TERM 1881 1529857 - 1529893 + T 90 -14 -3.34517 | gap 2, opp_overlap 1529856 1529855, overlap 1529855 1529863 GATGTGTAAGTAAGG TGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCA TATTTACGCCGGAAT TERM 1882 1529863 - 1529886 + T 82 -11.8 -3.452 | gap 1, opp_overlap 1529856 1529855, overlap 1529857 1529855 TAAGTAAGGTGGTAA GGTCAC-TCCC CAG GGGACGTGACC TTATCCATATTTACG katE 1532158 - 1529897 - | hydroperoxidase II SF1497 1532341 - 1532604 + | cell division modulator ydjO 1532881 - 1533621 + | hypothetical protein insB 1534027 - 1533632 - | IS1 ORF2 insA 1534329 - 1534054 - | IS1 ORF1 TERM 1883 1534464 - 1534434 - R 90 -10.4 -4.33653 | CATTTAAAAAGTAAA GCAACGGCCCCTAT ACA AAACGGACCGTTGC CAGCATAAGAATTAA SF1501 1535866 - 1534799 - | putative transporter TERM 1884 1535307 - 1535293 - G 70 -3.6 -4.59853 | GGAATGCGGCAAAAA TTACCA CGC TGATAA TTGACGTCGGATTGG SF1502 1536589 - 1535999 - | hypothetical protein TERM 1885 1536581 - 1536566 - G 73 -4 -4.74767 | gap 1, overlap 1536568 ACAAGCAATAGAAAA GAGAAGG TGA CCTTC-C GCCGTCATGATAAAA TERM 1886 1536580 - 1536568 - G 72 -7.7 -3.97283 | overlap 1536566 AAGCAATAGAAAAGA GAAGG TGA CCTTC CGCCGTCATGATAAA TERM 1887 1536748 - 1536721 - R 100 -19.2 -4.16301 | opp_overlap 1536721 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG TERM 1888 1536721 - 1536748 + r 95 -17 -2.70932 | opp_overlap 1536721 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG yniC 1537420 - 1536752 - | 2-deoxyglucose-6-phosphatase TERM 1889 1537752 - 1537763 + G 90 -7.2 -5.15381 | GATCGATATGATGCA GGCG AATA CGCC TTTTTTGAATCTGTT TERM 1890 1537829 - 1537849 + G 81 -6.1 -4.84359 | overlap 1537832 GTGTGAACGTTATGT TCTGGGTGA TTT TCATCCTGA TTTTTGTCGGACTGG SF1504 1537567 - 1538103 + | hypothetical protein TERM 1891 1538126 - 1538110 - T 93 -10.8 -4.43477 | opp_overlap 1538109 1538110 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA TERM 1892 1538110 - 1538126 + T 71 -10.8 -2.64099 | opp_overlap 1538110, overlap 1538109 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA SF1505 1539004 - 1538144 - | hypothetical protein TERM 1893 1538708 - 1538696 - G 90 -9.1 -4.48713 | CTGACCAAGAATAAA TGCGC TAT GCGCA TCCAGCGGACGAGGT SF1506 1539400 - 1539110 - | hypothetical protein TERM 1894 1539471 - 1539494 + r 100 -9.6 -5.06414 | overlap 1539473 CGACAGGTTGGTGGT GATTCCCCCA ATGC TGGGGGAATG TTTTTGTTAGCGGGA TERM 1895 1539473 - 1539492 + r 95 -12.2 -4.16307 | overlap 1539471 ACAGGTTGGTGGTGA TTCCCCCA ATGC TGGGGGAA TGTTTTTGTTAGCGG pfkB 1540430 - 1539501 - | 6-phosphofructokinase 2 TERM 1896 1540673 - 1540689 + H 100 -6.5 -5.88565 | CTTAAGAAAGTTTCC GGGACCG CGA TGGTCTC TTTTTTTGTTGTACG TERM 1897 1540850 - 1540840 - g 83 -5.4 -5.03314 | opp_overlap 1540840 GCCAGCGCTAAAAAA CCTT TCG AAGG TAATCTGAACGCAGG TERM 1898 1541237 - 1541225 - g 73 -9.1 -3.67141 | opp_overlap 1541230, overlap 1541229 ACAATGCCAGTGAAA CCCAG CCG CTGGG CTATGCCTCCGGGGC SF1508 1540750 - 1541475 + | hypothetical protein TERM 1899 1541482 - 1541510 + T 79 -10.9 -3.38317 | opp_overlap 1541481, overlap 1541480 1541484 AGCATGTAAAATTAT CTGCCGGACCGTG TTA TGCGGTCTGGCTG TCTTCGTTTGTCACT TERM 1900 1541484 - 1541508 + T 79 -12.1 -3.25317 | opp_overlap 1541481, overlap 1541482 1541480 CATGTAAAATTATCT GCCGGACCGTG TTA TGCGGTCTGGC TGTCTTCGTTTGTCA insB 1543177 - 1542782 - | IS1 ORF2 insA 1543479 - 1543204 - | IS1 ORF1 TERM 1901 1543608 - 1543618 + H 83 -4 -5.34555 | opp_overlap 1543608 GTTTCTAGTAATAAG GAAA TGA TTTC TTTTTTATAGTGTAA TERM 1902 1545166 - 1545152 - g 73 -9.2 -3.61715 | CAGCGCCTGGAAGAA GCCGCG AAA CGCGAC CACCGTAAAATCGGT TERM 1903 1545367 - 1545357 - g 71 -2.4 -5.00616 | TCCTGTGGGAAAAAA CCGG TCA CTGG GACAACTACAAAGAT TERM 1904 1546036 - 1546061 + G 72 -8.9 -3.8512 | overlap 1546038 ATTCGCTGGTTTCTT CCCGACCTGGC TTGC GCCAGTTCAGG TTGTTATCATGAATA thrS 1544438 - 1546366 + | threonyl-tRNA synthetase TERM 1905 1546770 - 1546746 - g 72 -6.4 -4.39571 | gap 1 GTGATAAAGCCAAAA TCACG-CTGCG TTTC CGCGGTCGTGA GATGGCGCACCAGCA infC 1546478 - 1546912 + | translation initiation factor IF-3 TERM 1906 1546929 - 1546958 + F 76 -9.3 -3.72593 | opp_overlap 1546925, overlap 1546951 GCCTTCAAGTAGCAC TATCTGTGGAGCC TTTG GGCTTCACAGGCA TTGTTCGCCTTTGTT rpmI 1547009 - 1547206 + | 50S ribosomal protein L35 rplT 1547259 - 1547615 + | 50S ribosomal protein L20 TERM 1907 1547627 - 1547645 + F 93 -10.3 -4.54727 | opp_overlap 1547627 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1908 1547645 - 1547627 - f 79 -10.3 -3.62418 | opp_overlap 1547627 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC pheM 1547738 - 1547782 + | phenylalanyl-tRNA synthetase (pheST) operon leader peptide TERM 1909 1547847 - 1547832 - f 79 -10.4 -3.55815 | opp_overlap 1547832 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1910 1547832 - 1547847 + F 100 -10.4 -5.71712 | opp_overlap 1547832 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1911 1547894 - 1547880 - f 82 -2.7 -5.61881 | TTTGAAAAATAAAAA GCCAG TCTAT CAGGC GTAATTGTCGCAGCC TERM 1912 1548182 - 1548170 - g 71 -2.6 -5.0133 | TATTTGGGTAAAAAA GGGC ACTTA ACCC TTCAGATGACGACCC pheS 1548065 - 1549048 + | phenylalanyl-tRNA synthetase subunit alpha pheT 1549063 - 1551450 + | phenylalanyl-tRNA synthetase subunit beta ihfA 1551455 - 1551754 + | integration host factor subunit alpha TERM 1913 1551786 - 1551772 - f 100 -12.8 -4.88407 | opp_overlap 1551772 TGATCTAACTAAAAA GGCCGC TAT GCGGCC TTTTTTCTTTTCACT TERM 1914 1551772 - 1551786 + F 100 -12.8 -5.80951 | opp_overlap 1551772 TGATCTAACTAAAAA GGCCGC TAT GCGGCC TTTTTTCTTTTCACT btuC 1551855 - 1552835 + | vtamin B12-transporter permease btuE 1552898 - 1553449 + | putative glutathione peroxidase btuD 1553449 - 1554198 + | vitamin B12-transporter ATPase nlpC 1554276 - 1554740 + | lipoprotein TERM 1915 1554779 - 1554753 - f 100 -19.6 -4.60487 | opp_overlap 1554753 TAGTATGTCGAAAAA TTGACGGCGATG ATA CATCGCCGTCAA TTTACTCCTGAATAC TERM 1916 1554753 - 1554779 + F 100 -19.6 -3.79747 | opp_overlap 1554753 TAGTATGTCGAAAAA TTGACGGCGATG ATA CATCGCCGTCAA TTTACTCCTGAATAC TERM 1917 1555458 - 1555486 + G 77 -5.9 -4.63218 | GCGGTTTTTGATGGT CTTTTCACCCGCG TAA TGCTGGAGAAAGG TTTTATTCAGCAACA SF1524 1554987 - 1555700 + | hypothetical protein TERM 1918 1555754 - 1555774 + F 78 -6.1 -4.63932 | opp_overlap 1555754 1555752 CTACACTATCAAACA GATAGGATC TAT GACCCTGTC TTTTATTACCCGCTG SF1525 1555764 - 1557200 + | hypothetical protein TERM 1919 1557521 - 1557498 - T 95 -13.2 -3.86822 | CAAGTTGCGCAGAAA TGCCCATCCC ATCA GGAATGGGCA CGCATTCAGAAGCGG aroH 1558573 - 1557527 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1920 1557919 - 1557932 + g 86 -6.7 -4.96848 | opp_overlap 1557919, overlap 1557909 CGCTGGTCTGATAGA TGGTC ATCT GACCA TTTTTGTCTGGCGAG TERM 1921 1558741 - 1558714 - R 95 -7.8 -5.33131 | opp_overlap 1558722 TAACAAAAAAACAAA CCAATGCACTAG TTCT CTAGTACATTCG GCGACTAAGGCCCAT ydiA 1559563 - 1558730 - | hypothetical protein TERM 1922 1559648 - 1559667 + H 85 -6.6 -5.24129 | overlap 1559642 GTAATGTCTGGTTTA TAAAATGA ACCT TCATTTTA TTTTTTATAAAAACA TERM 1923 1561583 - 1561601 + G 78 -8 -4.36914 | opp_overlap 1561582, overlap 1561595 1561598 TCTGACTGAAGGGAT CGCGACGC TGG GTGCCGCG TTTTATCCGAAGCGC ppsA 1559895 - 1562273 + | phosphoenolpyruvate synthase TERM 1924 1562310 - 1562276 - T 82 -5.5 -5.10665 | opp_overlap 1562281, overlap 1562280 1562281 ACTGAAGAAATAAAA TAAATCCCCGGCGGC GTTCA GTCGCCGGGGTTATG TGATCCCCGAAGATG TERM 1925 1562306 - 1562280 - T 100 -10.7 -5.02645 | opp_overlap 1562281, overlap 1562276 1562281 AAGAAATAAAATAAA TCCCCGGCGGC GTTCA GTCGCCGGGGT TATGTGATCCCCGAA TERM 1926 1562281 - 1562305 + T 100 -16.4 -3.54475 | opp_overlap 1562280 1562276 1562281 AGAAATAAAATAAAT CCCCGGCGGC GTTCA GTCGCCGGGG TTATGTGATCCCCGA TERM 1927 1562305 - 1562281 - T 93 -14.2 -3.57927 | opp_overlap 1562281, overlap 1562280 1562276 AGAAATAAAATAAAT CCCCGGCGGC GTTCA GTCGCCGGGG TTATGTGATCCCCGA ydiD 1564030 - 1562330 - | short chain acyl-CoA synthetase TERM 1928 1563151 - 1563119 - G 85 -9.8 -4.16904 | overlap 1563140 AAGATCATAGACAAA CGGCGTTGCGCCTA GCATA CAGGTGCAACGCTG CTGCTCAAGCAGCGC TERM 1929 1564022 - 1563997 - G 84 -11.2 -3.81755 | gap 1, overlap 1564000 ACTCTCGAAACAGAA CATCAGGCCCG AGTTG CGGGCCTG-TG GGATGCATGATTAGC TERM 1930 1564020 - 1564000 - G 84 -14 -2.69057 | overlap 1563997 CTCGAAACAGAACAT CAGGCCCG AGTTG CGGGCCTG TGGGATGCATGATTA ydiT 1564326 - 1564033 - | hypothetical protein ydiS 1565612 - 1564323 - | hypothetical protein ydiR 1566606 - 1565668 - | electron transfer flavoprotein subunit YdiR ydiQ 1567390 - 1566626 - | putative electron transfer flavoprotein YdiQ TERM 1931 1567647 - 1567679 + H 80 -6.3 -4.90869 | opp_overlap 1567631 1567654, overlap 1567655 GCGGTTGTATAACCG CAATACACGCCGTAT TTT ATCCGGCATATATTG TTTTTGCTTGCTCAT insA 1568246 - 1568521 + | IS1 ORF1 insB 1568548 - 1568943 + | IS1 ORF2 SF1537 1570267 - 1569506 - | transcriptional regulator YdeO TERM 1932 1570772 - 1570742 - R 81 -12.8 -3.28537 | opp_overlap 1570736 ATAGTCAATGAGGAA TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA ATGAGAAGAGGCATT SF1538 1573065 - 1570786 - | putative oxidoreductase SF1539 1574136 - 1573399 - | minor fimbrial subunit, D-mannose specific adhesin TERM 1933 1573510 - 1573547 + g 71 -3.4 -4.74103 | gap 1, overlap 1573513 TACTTTGCTTTTATT TACTGTCCCCAGGGAGA CATTT TCTCCC-GTAGCCAGTA TTTTTCCATTACGCA insA 1574204 - 1574479 + | IS1 ORF1 insB 1574506 - 1574901 + | IS1 ORF2 SF1542 1574979 - 1575797 + | IS600 ORF2 TERM 1934 1576065 - 1576043 - f 100 -9.9 -5.68489 | opp_overlap 1576043 GACAACAATAAAAAA GCCACCAGT TAACT ACTGATGGC TCTGATAACTCATGC TERM 1935 1576596 - 1576584 - f 83 -4.1 -5.28942 | overlap 1576585 TACCTTAAATAAAAA CCTGA TTA TCAAG CAGATATGCATGGAT ycgW 1576757 - 1577092 + | hypothetical protein TERM 1936 1577148 - 1577127 - T 100 -15.9 -4.3341 | CAAAATCAATATAAA CAGCCCCTC CGGA GAGGGGCTG GAGAGTGGCGCTATG TERM 1937 1578319 - 1578304 - T 100 -7.5 -5.7946 | opp_overlap 1578304 1578317, overlap 1578305 TTCGCAATAAAAAAA CCCGC TCAGCG GCGGG TTGTAGAAACTCTTC TERM 1938 1578315 - 1578305 - T 76 -8.2 -4.06592 | opp_overlap 1578304, overlap 1578304 TCGCAATAAAAAAAC CCGC TCA GCGG CGGGTTGTAGAAACT SF1544 1579223 - 1578402 - | antitermination protein, homolog of cryptic prophage rus 1579594 - 1579238 - | endodeoxyribonuclease RUS (Holliday junction resolvase) SF1546 1580656 - 1579607 - | hypothetical protein TERM 1939 1580928 - 1580957 + r 77 -11.4 -3.13403 | overlap 1580926 GTAATATTTTGCGTT GCGTGCCATCGG TTTTCT CCGGTGGCACGG TGTTACTCAGCGGGA SF1547 1581251 - 1581003 - | hypothetical protein TERM 1940 1581401 - 1581388 - R 100 -9.5 -5.77734 | opp_overlap 1581388 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 1941 1581388 - 1581401 + r 70 -9.5 -3.06183 | opp_overlap 1581388 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 1942 1581598 - 1581613 + r 83 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA relE 1581986 - 1581699 - | hypothetical protein relB 1582225 - 1581986 - | bifunctional antitoxin/transcriptional repressor RelB SF1550 1583265 - 1582552 - | IS600 ORF2 SF1551 1583708 - 1583406 - | IS600 ORF1 SF1552 1583809 - 1584789 + | proline permease TERM 1943 1584798 - 1584821 + F 100 -9.6 -5.16841 | TCTGTAAACCCTCAA TCCCTTCTCT TACC GGAGAGGGGA TTTTTATTCATATAA ydfI 1584878 - 1586338 + | putative oxidoreductase TERM 1944 1586367 - 1586344 - T 100 -11.8 -5.63103 | gap 1, overlap 1586348 CGTGAAGTAAAAAAA GCAATGCCGCC ATC GGCGGCATT-C ACACACTTAGTTCAT TERM 1945 1586364 - 1586348 - T 100 -13.7 -4.07651 | overlap 1586344 AAGTAAAAAAAGCAA TGCCGCC ATC GGCGGCA TTCACACACTTAGTT SF1554 1586577 - 1586374 - | hypothetical protein TERM 1946 1586748 - 1586721 - R 76 -8.4 -4.08064 | opp_overlap 1586744, overlap 1586722 AAGGCGGGGGGAAAA GCCTCTCATCCC GGAT GGGATGAGAGTA AATGAATTACTCTTC TERM 1947 1586747 - 1586722 - R 78 -11.9 -3.04517 | opp_overlap 1586744, overlap 1586721 AGGCGGGGGGAAAAG CCTCTCATCCC GGAT GGGATGAGAGT AAATGAATTACTCTT ydfH 1587393 - 1586755 - | hypothetical protein TERM 1948 1587521 - 1587504 - R 84 -10.5 -3.8591 | TGTGACAAGCAATAA CCCGGCA GTTA CGCCGGG TATAAAAATTACTGA ydfG 1588276 - 1587530 - | 3-hydroxy acid dehydrogenase dcp 1588413 - 1590458 + | dipeptidyl carboxypeptidase II TERM 1949 1590507 - 1590460 - T 79 -8.5 -4.2074 | gap 2, opp_overlap 1590466 1590470, overlap 1590462 1590469 1590470 GCTTGAACATATAAA CACCACCAATGGCTGGCCTGGAG ATAT CGCCAGGCCAGCC-T-GGTTATA GCAGTAATTGCAGCA TERM 1950 1590505 - 1590462 - T 76 -8.9 -3.70043 | gap 2, opp_overlap 1590466 1590470, overlap 1590460 1590469 1590470 TTGAACATATAAACA CCACCAATGGCTGGCCTGGAG ATAT CGCCAGGCCAGCC-T-GGTTA TAGCAGTAATTGCAG TERM 1951 1590466 - 1590502 + T 86 -13 -3.32268 | gap 1, opp_overlap 1590462 1590460 1590469 1590470, overlap 1590470 ACATATAAACACCAC CAATGGCTGGCCTGGAG ATAT CGCCAGGCCAGCC-TGG TTATAGCAGTAATTG TERM 1952 1590500 - 1590469 - T 100 -15.8 -3.31691 | opp_overlap 1590466 1590470, overlap 1590462 1590460 1590470 TATAAACACCACCAA TGGCTGGCCTGGAG ATAT CGCCAGGCCAGCCT GGTTATAGCAGTAAT TERM 1953 1590470 - 1590499 + T 100 -19.3 -2.83271 | opp_overlap 1590469 1590462 1590460 1590470, overlap 1590466 ATAAACACCACCAAT GGCTGGCCTGGAG ATAT CGCCAGGCCAGCC TGGTTATAGCAGTAA TERM 1954 1590499 - 1590470 - T 100 -19.3 -2.58292 | opp_overlap 1590470 1590466, overlap 1590469 1590462 1590460 ATAAACACCACCAAT GGCTGGCCTGGAG ATAT CGCCAGGCCAGCC TGGTTATAGCAGTAA ydeJ 1591021 - 1590503 - | competence damage-inducible protein A TERM 1955 1590958 - 1590930 - G 84 -13.9 -2.55074 | opp_overlap 1590926 GTTAAGCGTAATTGA TCCGCGATAAGTC TTT GACTCAACGCGGA TGTCAGGTTTTCAAT TERM 1956 1591402 - 1591375 - H 73 -7.6 -4.07885 | overlap 1591378 CAGGGCGGTTTAAAA CAGGATGCAGCG CCAC CGCCGCCTCATG CAATAGAAGATGGCT TERM 1957 1591888 - 1591846 - H 91 -2.1 -5.92337 | gap 1, overlap 1591851 ATATATTAAAAAAAA CAACAGCGTATTTTGCACAG GAGT CGCTGAAAAATACGC-GTTA ATCGAACAATGGCGA SF1559 1591925 - 1592743 + | IS600 ORF2 TERM 1958 1592889 - 1592906 + T 100 -10.5 -5.42259 | CCATGCAAGCATTCA CCGCCGG TTTA CTGGCGG TTTTTTTCGCCGTCA TERM 1959 1592964 - 1592928 - T 100 -10.2 -4.82901 | gap 1, opp_overlap 1592929, overlap 1592929 1592931 TCGCCGTCATAAAAA TCAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGGT TAGGTGAGGGATTAT TERM 1960 1592929 - 1592963 + T 85 -13.7 -3.06133 | gap 1, opp_overlap 1592928 1592929 1592931 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 1961 1592963 - 1592929 - T 93 -13.7 -3.49419 | gap 1, opp_overlap 1592929, overlap 1592928 1592931 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 1962 1592961 - 1592931 - T 93 -14.9 -3.31915 | gap 1, opp_overlap 1592929, overlap 1592929 1592928 CCGTCATAAAAATCA GGCCCCTTG-TACA CAAC TGTAACAAGGGGCC GGTTAGGTGAGGGAT TERM 1963 1593235 - 1593219 - T 72 -5.7 -4.40298 | overlap 1593220 ACTTAAATCAACAAA GCGCGGG CTG CCCCCAC GGTCTTGCACGAATC ydeF 1594329 - 1593211 - | putative transport protein TERM 1964 1594323 - 1594333 + g 72 -5.4 -4.48902 | opp_overlap 1594315, overlap 1594315 1594320 TCATAAATGGCAGCG TAGC CAT GCTA TTTCTTTACATCTCT TERM 1965 1594715 - 1594736 + G 86 -3.6 -5.4505 | overlap 1594717 CGGTTTGCGCTTTAT GCTGGTCG CTTTTC CGGCCATC TTTTTTGTTGCACGA TERM 1966 1594861 - 1594883 + G 84 -4 -5.23316 | overlap 1594854 CTGCTGGACTGGCTT CGCTGGTGTT ACA GGCACAGGCG TTTTTTACTATCGTG TERM 1967 1594895 - 1594907 + G 70 -6.9 -4.05788 | GGCGTTTTTTACTAT CGTGC TTG GCGCG TTTACTTTCGGGGAG TERM 1968 1594951 - 1594962 + G 77 -5.8 -4.63527 | opp_overlap 1594942 AACAATTGGCGGGGA TCGC CTTA GCGA TTTTTGGCGTACTGG ydeD 1594593 - 1595492 + | O-acetylserine/cysteine export protein TERM 1969 1595513 - 1595496 - T 93 -12.7 -3.73068 | GTGGGAAGTTAATAA GCCCCGA GATG TCGGGGC CAGAACAAACTACAT marB 1595741 - 1595523 - | hypothetical protein TERM 1970 1595637 - 1595604 - G 77 -8.9 -4.08485 | gap 1, overlap 1595605 GTGATTTAAATCAAA CGGTGGTTGTTCCTGC GAT GGGGGAACAACCAC-G ACATTGGCACAAGAA marA 1596156 - 1595773 - | DNA-binding transcriptional activator MarA TERM 1971 1595818 - 1595806 - G 72 -4.7 -4.68424 | TAATGGATGTAAAAA GCGCG ATT CGCCC TGCATATTGGTCATC marR 1596610 - 1596176 - | DNA-binding transcriptional repressor MarR ydeB 1596822 - 1597487 + | multiple drug resistance protein MarC TERM 1972 1597492 - 1597505 + T 79 -9.5 -3.6707 | opp_overlap 1597492 CGTACCATTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT TERM 1973 1597505 - 1597492 - T 100 -9.5 -5.1861 | opp_overlap 1597492 CGTACCATTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT ydeA 1598702 - 1597614 - | sugar efflux transporter SF1567 1599967 - 1598852 - | hypothetical protein TERM 1974 1599532 - 1599521 - G 72 -5.8 -4.40605 | ATTCATAAACAGAAA GAGC ACAC GCTC GACGCCGGTCTGAAA TERM 1975 1600165 - 1600151 - H 79 -11.4 -3.36569 | overlap 1600149 CCAAGTGTTTAAAGA TGCGGG AAT CCCGCA AGGCGTATATGGCTG TERM 1976 1600582 - 1600570 - H 86 -9.1 -4.3898 | opp_overlap 1600574 1600575 ATCAGGTGGAGAAAA CCCTG GCG CAGGG TGCGCGTTTGTTACT TERM 1977 1601031 - 1601007 - H 72 -10.8 -2.87931 | gap 1 TTCAGCTCTGATATA CTCGCAGGTCT TTTC AGACCTGCG-G TCCAGGAGTAGAAAG yneH 1601046 - 1601972 + | glutaminase TERM 1978 1602198 - 1602216 + G 82 -11.7 -3.524 | TCGCTCAGCACGCCA CCGCGAC CTGCT GTCGCGG TTGTCTGGCTAAGTG SF1570 1601972 - 1602316 + | hypothetical protein TERM 1979 1602529 - 1602539 + F 74 -5.4 -4.62069 | opp_overlap 1602529 TCATCTGCTACGTAA TAGC ATC GCTA TTTTTGCGCTAACCA TERM 1980 1603187 - 1603224 + G 89 -14.3 -3.14404 | ACATGTCTGTTGACC TTTGTCACCGGTGCGGT GGAA ATCGTACTGGTGGCAAA TTCGGTGATTGATAT SF1571 1602941 - 1603888 + | hypothetical protein uxaB 1604115 - 1605566 + | altronate oxidoreductase TERM 1981 1605586 - 1605601 + T 93 -10.4 -4.58585 | ACCGTTACTTCTGAA CCCGGT TTCG ACCGGG TTTCTTATTTCACTA SF1573 1607061 - 1606141 - | IS1294 transposase TERM 1982 1606178 - 1606190 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 1983 1606274 - 1606288 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 1984 1606809 - 1606819 + g 79 -4.6 -5.00616 | overlap 1606804 1606803 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC SF1574 1607259 - 1607071 - | hypothetical protein TERM 1985 1607642 - 1607655 + G 79 -2.3 -5.28166 | GTTCAGCATTCTCGG TGTCG CCAT CGCCA TTTTTCTTGGTTTTC TERM 1986 1607774 - 1607764 - g 72 -4.6 -4.70659 | overlap 1607765 1607767 1607769 TGCGAGAGGTAAAAA CGAC ATT GCCG GATTCGGCAAGTGTA SF1575 1607409 - 1608374 + | hypothetical protein SF1576 1609136 - 1608378 - | trans-aconitate 2-methyltransferase SF1577 1609466 - 1609176 - | autoinducer-2 (AI-2) modifying protein LsrG SF1578 1610260 - 1609490 - | aldolase SF1579 1611190 - 1610285 - | insertion element IS2 transposase InsD SF1580 1611393 - 1611148 - | IS2 orf1 TERM 1987 1611921 - 1611935 + r 72 -5.6 -4.41348 | GTGAACTTACCACGC CCAGCA ATG TGCCGG TTTCTTTGACAGGAG TERM 1988 1612351 - 1612339 - R 70 -9.1 -3.33525 | overlap 1612337 TTCACGCATAGAACA TGCCG AAA CGGCA GCGATATACTCCGGG ydeW 1613637 - 1612684 - | sorC family transcriptional regulator TERM 1989 1613582 - 1613566 - G 78 -7.9 -4.34402 | overlap 1613567 GTCGTGATAGTAAAA CCACGCG ATC CGCGCGA CCTGTTCTTCTTCAC TERM 1990 1614258 - 1614278 + G 79 -10.4 -3.85092 | AAAATGAAGAACTTG CTGGCGGC GCTGG GCTGCCAG TTTGATCTGCATAGT TERM 1991 1615226 - 1615256 + G 83 -9.7 -4.11805 | CTACCAGCTGTTGCG CAGCATCGCCGCA CAGAA TGTGGCTGTGCTG TTTATCTCCTCTGAT SF1583 1613886 - 1615421 + | putative ATP-binding component of a transport system TERM 1992 1615953 - 1615968 + G 75 -4.6 -4.82901 | opp_overlap 1615953, overlap 1615942 1615941 1615955 GGCTGCTGGCGAAGA CGGCGT TTGG ACGCAG TTTTTATGCCACGGG ydeY 1615415 - 1616443 + | putative transport system permease protein TERM 1993 1617033 - 1617043 + G 74 -8.2 -3.86822 | GATTGGGCAAAGCCC GCGC GTG GCGC TTTATAGCGCGATTC TERM 1994 1617248 - 1617259 + G 81 -7.2 -4.71828 | GTTCCATTATCGGCA CCGC CATT GCGG TTTTATTAGTGGGAT ydeZ 1616443 - 1617435 + | putative transport system permease protein SF1587 1618685 - 1619050 + | insertion sequence 2 OrfA protein SF1588 1619084 - 1619923 + | insertion sequence 2 OrfB protein SF1589 1620785 - 1619973 - | hypothetical protein SF1590 1621126 - 1620842 - | hypothetical protein rspA 1622411 - 1621197 - | starvation sensing protein SF1592 1622943 - 1622617 - | hypothetical protein SF1593 1623078 - 1623419 + | hypothetical protein ynfC 1624727 - 1624017 - | hypothetical protein SF1596 1624835 - 1625140 + | hypothetical protein TERM 1995 1625157 - 1625179 + F 76 -12 -2.74144 | opp_overlap 1625157, overlap 1625156 ACATTATCGACTGAA CGCCGGATAT GAC ACATCCGGCG ATTTGAACATACAAC TERM 1996 1625179 - 1625157 - f 85 -14.2 -3.08642 | opp_overlap 1625156 1625157 ACATTATCGACTGAA CGCCGGATAT GAC ACATCCGGCG ATTTGAACATACAAC SF1597 1625339 - 1625659 + | hypothetical protein TERM 1997 1626103 - 1626084 - gT 74 -5.6 -4.57073 | TATCTTCTTGAAAAA GCGCGCGA GAAA TCGAACGC CAAAATGATTGTTAT SF1598 1625628 - 1626461 + | putative anaerobic dimethyl sulfoxide reductase subunit A TERM 1998 1627225 - 1627203 - T 100 -9.8 -4.80453 | opp_overlap 1627215 CTAGTACAAAACAAA GGCCCAGACC ATT GGTCCAGACC GTAGTTAGTTAATCA SF1599 1628472 - 1627483 - | hypothetical protein SF1600 1629048 - 1628557 - | hypothetical protein SF1601 1629869 - 1629369 - | hypothetical protein SF1602 1630374 - 1629859 - | hypothetical protein SF1603 1631173 - 1630805 - | hypothetical protein SF1604 1632070 - 1631585 - | putative integrase SF1605 1632981 - 1632142 - | IS911 ORF2 TERM 1999 1632550 - 1632561 + g 77 -5.8 -4.63218 | opp_overlap 1632546 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 2000 1632902 - 1632922 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF1606 1633346 - 1633008 - | IS911 ORF1 SF1608 1634417 - 1633380 - | putative integrase TERM 2001 1634931 - 1634905 - gH 91 -3.1 -5.54192 | gap 1 ACGAACTGAAAAAAA TGGGTATCTATA AGCG TAAAGAT-CCCA ATGGCCATTTTGTCG SF1607 1634343 - 1635509 + | putative anaerobic dimethyl sulfoxide reductase subunit A TERM 2002 1636527 - 1636513 - fH 77 -3.5 -5.1861 | GTTACGATGAAAAAA CGCTG CCCGC CAACG CACCACGTAACGCGC TERM 2003 1636947 - 1636964 + FH 76 -4.1 -4.93296 | opp_overlap 1636947 1636941 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2004 1636964 - 1636947 - fH 86 -4.1 -5.45802 | opp_overlap 1636947, overlap 1636941 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC SF1610 1637619 - 1638236 + | putative oxidoreductase, Fe-S subunit TERM 2005 1638359 - 1638345 - g 72 -5.7 -4.56597 | overlap 1638349 GTTCGCCGCCAAAAA TGACG CAGAC CGTCA GCACATTGTTCGTGG TERM 2006 1638602 - 1638616 + G 78 -7.8 -4.3586 | GGTTACTTGTCAGCA TGGCGC TCG GCGTCA TTTTCGTCTGGATGA SF1611 1638238 - 1639092 + | putative DMSO reductase anchor subunit TERM 2007 1639099 - 1639118 + F 72 -9.2 -3.6106 | opp_overlap 1639098 1639097, overlap 1639100 GCAGGTTAACAAATT GGTGCGGG GCAA CCCGCACA TTTCAGGATGTTAGG TERM 2008 1639100 - 1639117 + F 79 -12.7 -2.76315 | opp_overlap 1639098 1639097, overlap 1639099 CAGGTTAACAAATTG GTGCGGG GCAA CCCGCAC ATTTCAGGATGTTAG TERM 2009 1639172 - 1639194 + G 95 -9.8 -4.65916 | overlap 1639170 ATAATTTTTCTGTCG CGGCGCGC GTGTTGG GCGCGCTG TTTTATTACGCTCCA TERM 2010 1639210 - 1639231 + G 70 -10.9 -2.74012 | gap 1, opp_overlap 1639214, overlap 1639213 TTTTATTACGCTCCA GAGAGTGCGG AAG CCGCAC-CTC TGGTTGCGGTACTCA TERM 2011 1639228 - 1639214 - g 75 -11.4 -2.8805 | opp_overlap 1639213 1639210 ATTACGCTCCAGAGA GTGCGG AAG CCGCAC CTCTGGTTGCGGTAC TERM 2012 1639285 - 1639310 + G 70 -6.9 -4.07885 | gap 1, opp_overlap 1639285 1639286, overlap 1639285 TGGCCTCTACCAGAA G-CGTCATTAGC GCC GCTGGTGACGGC TTTTCAGACACAGTG TERM 2013 1639604 - 1639616 + G 75 -4.8 -4.82518 | CATGGCACCTTTTTC CGTG GTCAA CACG TTTTCTTGATGTTTT SF1612 1639135 - 1639749 + | twin-argninine leader-binding protein DmsD TERM 2014 1639803 - 1639817 + F 89 -4.2 -5.80248 | opp_overlap 1639803 GATTCGGCAATAATA CGTTAC AAT GTCACG TTTTTTTATCTCTTA TERM 2015 1640257 - 1640292 + G 70 -10.4 -3.14344 | opp_overlap 1640254 GCCTGGTTAAATCGC TTGCCTCGCTGCTGGT AGTA ACCAGCGGCAGTGCAA TTGGTCGCGAAGGTG TERM 2016 1640396 - 1640420 + G 77 -12.1 -2.78715 | overlap 1640399 ATGGATCGCCTGTGG GGCCGCGGC GGGAATG GCTGCGGCC TATCGTGCCCCGCTT TERM 2017 1641112 - 1641082 - g 77 -9.7 -3.64599 | opp_overlap 1641085, overlap 1641085 TGATGATATGTGAAA TGACCGGGGAGTA TCAGC TACTCCCCGGTTT ATTGATTGCCTGCGT TERM 2018 1641109 - 1641085 - g 95 -15.8 -2.93585 | opp_overlap 1641085, overlap 1641082 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG TERM 2019 1641085 - 1641109 + G 100 -15.8 -4.33621 | opp_overlap 1641085 1641082 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG SF1613 1639944 - 1641200 + | putative voltage-gated ClC-type chloride channel ClcB bioD 1641848 - 1641153 - | putative dithiobiotin synthetase mlc 1643193 - 1641973 - | putative NAGC-like transcriptional regulator TERM 2020 1642637 - 1642626 - G 72 -7.2 -4.19624 | opp_overlap 1642626 CATGCTGAATATAAA CCGG TACG CCGG TATGCTGCTCCAGCG TERM 2021 1642640 - 1642667 + g 88 -8.4 -4.6951 | gap 1 ACCGGTACGCCGGTA TGCTGCTCCAGCG CCT CGCCG-AGCGGCA TTTCTTTTACATCCT TERM 2022 1642931 - 1642905 - G 70 -4.4 -4.4773 | overlap 1642899 1642907 GCAGAGCAAGGAAAA TCTCCCCGCG ACTAATG CGCAGAGAAA GATAGTGCCAGGCTT ynfL 1644230 - 1643328 - | putative LYSR-type transcriptional regulator TERM 2023 1644087 - 1644097 + g 72 -6.8 -4.25056 | overlap 1644076 AGTTCGTGCCAGCAG TCGG GCA CCGA TTTGTTGCTCCAGTG TERM 2024 1645595 - 1645630 + H 78 -12.1 -3.09516 | gap 2, opp_overlap 1645595, overlap 1645598 TGCACGCCTGAAAAA TAAGTCCGGACTGCGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2025 1645630 - 1645595 - H 100 -12.1 -4.58395 | gap 2, opp_overlap 1645595 1645598 TGCACGCCTGAAAAA TAAGTCCGGACTGCGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2026 1645598 - 1645627 + H 76 -9.4 -3.69395 | gap 2, opp_overlap 1645595, overlap 1645595 ACGCCTGAAAAATAA GTCCGGACTGCGGT AAAT ACC-C-GTCCGGAC TTATTGCCTGCTCAA TERM 2027 1646174 - 1646164 - g 72 -6.8 -4.17477 | overlap 1646165 1646167 AAAAAACAGCATAAA GCAG CAC CTGC CCAGAAAGCGCAGGC asr 1646014 - 1646322 + | acid shock protein precursor TERM 2028 1646367 - 1646397 + F 76 -11.9 -2.71924 | opp_overlap 1646365 1646368, overlap 1646366 TCGCGCCTGAAAATT ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC CTTTAGCGGAGGGTA TERM 2029 1646396 - 1646368 - f 82 -13.2 -3.08032 | opp_overlap 1646367 1646366, overlap 1646365 CGCGCCTGAAAATTA CGGTGCTAAGCG GGTAA CGTTTAGCACCG CCTTTAGCGGAGGGT SF1619 1646598 - 1647419 + | hypothetical protein TERM 2030 1647460 - 1647420 - T 86 -9.1 -4.40561 | gap 1, opp_overlap 1647426 1647428, overlap 1647417 1647428 CTGTCGCAAAAATAA TGTTCAA-ACGCTGCCCG ACAGCG CGGGCAGCGTCTTCATCA GGCAAGTTTCACCAT TERM 2031 1647426 - 1647453 + T 81 -12.7 -3.14463 | opp_overlap 1647417 1647420 1647428, overlap 1647428 CAAAAATAATGTTCA AACGCTGCCCG ACAGCG CGGGCAGCGTC TTCATCAGGCAAGTT TERM 2032 1647451 - 1647428 - T 100 -15.3 -3.65722 | opp_overlap 1647428 1647426, overlap 1647417 1647420 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TCTTCATCAGGCAAG TERM 2033 1647428 - 1647451 + T 100 -15.3 -3.13403 | opp_overlap 1647417 1647420 1647428, overlap 1647426 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TCTTCATCAGGCAAG SF1620 1647787 - 1647458 - | multidrug efflux system protein MdtI SF1621 1648139 - 1647774 - | multidrug efflux system protein MdtJ TERM 2034 1647964 - 1647976 + g 90 -4.7 -5.40072 | opp_overlap 1647965, overlap 1647965 CACAGCGCATAAGCT ACGCC TAA GGCGA TTTTTTTAACGGCGA TERM 2035 1647965 - 1647975 + g 72 -8.2 -3.83561 | opp_overlap 1647965, overlap 1647964 ACAGCGCATAAGCTA CGCC TAA GGCG ATTTTTTTAACGGCG TERM 2036 1648261 - 1648251 - H 74 -8.2 -3.92804 | overlap 1648252 GAAGAAAGGACTAAA GCGC GTT GCGC CAGTGCTGCTCACCT tqsA 1648550 - 1649584 + | putative transport protein TERM 2037 1649606 - 1649581 - T 95 -13.3 -3.69068 | overlap 1649579 1649582 CGATCTCAATAAAGA GTGACGGCCTC CGCA GAGGCCGTCAG GGTTACAGAGCTTTC TERM 2038 1649605 - 1649582 - T 100 -16.8 -2.80958 | overlap 1649581 1649579 GATCTCAATAAAGAG TGACGGCCTC CGCA GAGGCCGTCA GGGTTACAGAGCTTT pntB 1650997 - 1649609 - | pyridine nucleotide transhydrogenase pntA 1652555 - 1651008 - | NAD(P) transhydrogenase subunit alpha TERM 2039 1651122 - 1651096 - G 72 -5.8 -4.3898 | overlap 1651100 AGCACCGCGATAAAA CTAAGGAAGCTA ACC CAGCCTCCCTGG CCAATCTGCAACAGT SF1625 1653064 - 1654008 + | hypothetical protein TERM 2040 1654045 - 1654029 - f 77 -10.8 -3.31461 | opp_overlap 1654021 1654029 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2041 1654029 - 1654045 + F 83 -10.8 -3.81062 | opp_overlap 1654029, overlap 1654021 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2042 1654607 - 1654619 + G 73 -4.1 -4.77036 | TGCATCGGCTTTATT GTGGA TTG TTCAC TTTTTGATCCTGCGC SF1626 1654194 - 1655576 + | putative arginine/ornithine antiporter TERM 2043 1656269 - 1656249 - g 77 -8.3 -4.06419 | opp_overlap 1656239 1656249 1656253 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGTTGC TERM 2044 1656249 - 1656269 + G 76 -10.5 -3.35867 | opp_overlap 1656249, overlap 1656239 1656253 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGTTGC ydgB 1655613 - 1656335 + | short chain dehydrogenase ydgC 1656667 - 1656332 - | hypothetical protein rstA 1656796 - 1657539 + | DNA-binding transcriptional regulator RstA TERM 2045 1657660 - 1657679 + G 80 -5.6 -5.00616 | overlap 1657661 TATAATCGCCTCGTC CCTGCGTC TTAT GGCGCAGA TTTTTTACAACAAAC TERM 2046 1657661 - 1657678 + G 73 -9.1 -3.60048 | overlap 1657660 ATAATCGCCTCGTCC CTGCGTC TTAT GGCGCAG ATTTTTTACAACAAA TERM 2047 1657819 - 1657833 + G 71 -2.8 -4.86033 | overlap 1657821 ATCAAAAGAGCGAAT CCCTTT CCA AAAGTG TTTTTATCGCGATTT SF1630 1657628 - 1657891 + | hypothetical protein SF1631 1658037 - 1659083 + | putative transporter TERM 2048 1660214 - 1660178 - g 73 -3.6 -4.87665 | CGGTACGGATAAAAA CGCTCATGCAAGGCCA TTATG CGGCGTTGGATATGCG CTTAATGGAGCGCGT rstB 1659262 - 1660563 + | sensor protein RstB tus 1660639 - 1661568 + | DNA replication terminus site-binding protein fumC 1662968 - 1661565 - | fumarate hydratase TERM 2049 1662085 - 1662054 - G 76 -12.2 -2.50443 | gap 1, opp_overlap 1662053, overlap 1662053 TGAGATTTCACCAAT TCCGCAGCGCGGGCC AGA GGCCAGC-CAGCGGA CATCATTGGCGATTT TERM 2050 1663089 - 1663104 + r 76 -11.8 -2.68607 | opp_overlap 1663089, overlap 1663088 1663086 1663084 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC TERM 2051 1663104 - 1663089 - R 100 -11.8 -5.47218 | opp_overlap 1663089 1663088 1663086 1663084 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC fumA 1664757 - 1663111 - | fumarase A, fumarate hydratase class I; aerobic isozyme TERM 2052 1663731 - 1663746 + g 72 -4.7 -4.66163 | CAGGGATATATTTAC CTGGA TTATGT TCCAG TTTTTCGATCCAGAT TERM 2053 1665166 - 1665205 + G 95 -15.2 -3.06583 | gap 1, opp_overlap 1665158, overlap 1665171 AAATCGACTCTGCTC GGAGAGGCCGTT-GCCAAA CGC TTTGGCGAACTGCCTTTCC TGTTCAAAGTATTAT TERM 2054 1665171 - 1665200 + G 81 -10.1 -3.92592 | gap 1, opp_overlap 1665158, overlap 1665166 GACTCTGCTCGGAGA GGCCGTT-GCCAAA CGC TTTGGCGAACTGCC TTTCCTGTTCAAAGT TERM 2055 1665437 - 1665457 + G 72 -9.7 -3.29973 | CCCTACTCCAGCCGG TCGCCGG TGCACAT CCGGCGA TTGCTCACTTTTTAC manA 1664956 - 1666131 + | mannose-6-phosphate isomerase TERM 2056 1666189 - 1666209 + F 95 -12.6 -4.27483 | opp_overlap 1666184 1666187 1666186 AGGCTTATAACACCT TCAGGCGG CCAGT CCGCCTGA TTTCATTTTATGGAT TERM 2057 1666759 - 1666742 - g 73 -4 -4.86773 | overlap 1666743 1666744 CAAAAGGATGAAAAA GTCGCC TTTAGC GGCGGC GAGTTCCAGTTAAAT TERM 2058 1667408 - 1667390 - g 74 -8.1 -4.04927 | gap 1 GCAACGACTAAAGAA GCGCC-GC AAAC GCTGGCGC AGGAAGTAGATCGTT ydgA 1666232 - 1667740 + | hypothetical protein TERM 2059 1667754 - 1667777 + T 91 -11 -4.34402 | opp_overlap 1667741 1667754 AATTCACGGCCAAAA CGCCGGAG AATTTTCA CTCCGGCG TTTTCATCTGAAAAC TERM 2060 1667777 - 1667754 - T 89 -11 -4.1196 | opp_overlap 1667754, overlap 1667741 AATTCACGGCCAAAA CGCCGGAG AATTTTCA CTCCGGCG TTTTCATCTGAAAAC TERM 2061 1667932 - 1667961 + T 87 -10 -4.3255 | opp_overlap 1667935, overlap 1667935 TTTGTCAACAATCTG AAACGCCGGAGG TTTTTC TCTCCGGCGTTA TTTCTTACTTCAGCA TERM 2062 1667935 - 1667958 + T 95 -11.7 -4.27694 | opp_overlap 1667935, overlap 1667932 GTCAACAATCTGAAA CGCCGGAGG TTTTTC TCTCCGGCG TTATTTCTTACTTCA TERM 2063 1667958 - 1667935 - T 86 -11 -3.72051 | opp_overlap 1667935 1667932 GTCAACAATCTGAAA CGCCGGAG GTTTTTCT CTCCGGCG TTATTTCTTACTTCA uidC 1669232 - 1668060 - | membrane-associated protein TERM 2064 1670190 - 1670224 + r 100 -14.3 -3.69395 | gap 1, opp_overlap 1670181 AATGAAGCGGCAATC CCACGAGC-CGCGCCC AGAC GGGCGCGAGATTGTGG TTGTTGGGTCATCGC uidA 1672005 - 1670302 - | beta-D-glucuronidase TERM 2065 1670790 - 1670803 + g 73 -3.8 -4.83169 | opp_overlap 1670790, overlap 1670788 CAATACTCCACATCA CCAC GCTTGG GTGG TTTTTGTCACGCGCT TERM 2066 1671859 - 1671881 + g 78 -7.6 -4.30719 | opp_overlap 1671858 CTGATCGTTAAAACT GCCTGGCACT GCA ATTGCCCGGC TTTCTTGTAACGCGC TERM 2067 1672381 - 1672355 - R 74 -8.7 -3.87318 | gap 1 AATTACGATATGAAA CGCGGGCACAGT TATC ACCA-GCCCGCG AAATGAGAGGATCAG uidR 1672983 - 1672393 - | repressor for uid operon insB 1673783 - 1673388 - | IS1 ORF2 insA 1674085 - 1673810 - | IS1 ORF1 SF1644 1674756 - 1674136 - | 7-alpha-hydroxysteroid dehydrogenase TERM 2068 1674201 - 1674214 + g 86 -3.9 -5.40072 | CCCCCGGCGCAATGC TATTC ACCC GAATA TTTTTTTCACCCAGG TERM 2069 1674806 - 1674790 - R 84 -5.1 -5.3104 | opp_overlap 1674799 TCAGTAAAAATAAAA GGCAC CGCCTGT GTGCC ACATTTTTTATCATT TERM 2070 1674799 - 1674809 + r 85 -5.4 -5.37345 | opp_overlap 1674790 ATAAAAGGCACCGCC TGTG TGC CACA TTTTTTATCATTAAC malI 1675896 - 1674868 - | DNA-binding transcriptional repressor MalI TERM 2071 1676438 - 1676428 - g 72 -6.8 -4.24342 | TGGTTGACCAATAAA GGCA TTC TGCC AACCACAGATGCCGC TERM 2072 1676505 - 1676536 + G 74 -10.2 -3.47573 | gap 1 GATCCAGTCGATCGA TACCGG-GATCCTCG GTG CGGTGATCGCCGGTA TTATCGTCTGGATGC malX 1676071 - 1677663 + | bifunctional maltose and glucose-specific PTS system components IICB malY 1677673 - 1678845 + | cystathionine beta-lyase; maltose regulon modulator TERM 2073 1678845 - 1678886 + F 84 -8.7 -4.652 | overlap 1678846 CCGCGCTGTTCGCTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA TTTTTACCCTGCTTT TERM 2074 1678846 - 1678885 + F 85 -12.2 -3.38036 | overlap 1678845 CGCGCTGTTCGCTAA CCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGG ATTTTTACCCTGCTT TERM 2075 1679930 - 1679918 - g 75 -4.7 -4.80882 | AGCGCAGAGGAAAAA CGCGC ACT GCGAG AAAAAGTCGCCGCGA add 1678949 - 1679950 + | adenosine deaminase TERM 2076 1679957 - 1679981 + T 100 -17.3 -4.56597 | opp_overlap 1679957 GCGAAGTAACAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTCACGCAAGGC TERM 2077 1679981 - 1679957 - T 100 -17.3 -5.1963 | opp_overlap 1679957 GCGAAGTAACAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTCACGCAAGGC SF1649 1681026 - 1679986 - | putative oxidoreductase TERM 2078 1681415 - 1681437 + H 72 -6.3 -4.3208 | gap 1 GCACTTGTGGAGCGA CATGCTGCCC GTCC GGGT-GCATG TTTTCACTTGTCGGA SF1650 1681667 - 1681882 + | oriC-binding nucleoid-associated protein TERM 2079 1682006 - 1682025 + G 75 -7 -4.3014 | overlap 1682010 TATTGGAGGCTGGTT GCTTGGCC CGTT GGCCTGGC TTTTAGTCGCTCTGT SF1651 1681968 - 1682408 + | hypothetical protein SF1652 1682485 - 1683066 + | Na(+)-translocating NADH-quinone reductase subunit E SF1653 1683066 - 1683644 + | electron transport complex protein RnfB TERM 2080 1683685 - 1683669 - g 87 -4.5 -5.28176 | overlap 1683674 TGCATTCAGAAAAAA TAAAATC TGG GATTTCA ACGGCGGCATCCATC TERM 2081 1683721 - 1683674 - g 100 -5.5 -5.49579 | overlap 1683669 TCAGAAAAAATAAAA TCTGGGATTTCAACGGCGGCA TCCATC CACCGGAGATGAAAACCCAGA CCAACGGTACCCCCC TERM 2082 1683734 - 1683761 + G 86 -6.9 -4.90079 | overlap 1683735 1683736 AGACCAACGGTACCC CCCTGCGCCAG GTACTA CTGGCGCAGCA TTTTGTTATTCCACT TERM 2083 1683735 - 1683760 + G 74 -10.4 -3.52963 | overlap 1683734 1683736 GACCAACGGTACCCC CCTGCGCCAG GTACTA CTGGCGCAGC ATTTTGTTATTCCAC TERM 2084 1683736 - 1683759 + G 85 -13.9 -2.71055 | overlap 1683735 1683734 ACCAACGGTACCCCC CTGCGCCAG GTACTA CTGGCGCAG CATTTTGTTATTCCA TERM 2085 1684150 - 1684136 - g 72 -8.6 -3.80142 | GAGATAAGATTGAAA CGTTGA TTA TCAACG CTGCTGAGTGCGAGC TERM 2086 1685801 - 1685785 - g 82 -11.5 -3.54424 | opp_overlap 1685785, overlap 1685767 GTCGATCCGCGCAAA GCCGCAG TTG CCGCGGC TATTGCCCGCGTTCA SF1654 1683637 - 1685859 + | electron transport complex protein RnfC TERM 2087 1685954 - 1685970 + G 93 -5.8 -5.27477 | opp_overlap 1685954, overlap 1685955 CAGCCGTGCCAGGAA TCGCAG CGCAA CTGCGG TTTTTTGGTTGGGGT rnfD 1685860 - 1686918 + | electron transport complex protein RnfD SF1656 1686922 - 1687542 + | electron transport complex protein RnfG TERM 2088 1687936 - 1687912 - g 74 -3.4 -5.00616 | opp_overlap 1687912, overlap 1687913 TTCGCCGCCAAAAAA GGTCCGGCGC TTTCG GCACTGGACG GCTTTTCAATTGGTA TERM 2089 1687954 - 1687968 + G 72 -11.4 -2.50195 | overlap 1687953 1687952 1687955 TTTTCAATTGGTACG GGCGCA ACC TGCGCC ATGTTCGTGCTGGGT ydgQ 1687546 - 1688241 + | SoxR-reducing system protein RsxE nth 1688241 - 1688876 + | endonuclease III TERM 2090 1688902 - 1688883 - f 84 -8.6 -4.66987 | opp_overlap 1688882 1688883 GACATCTGAAGAAAA GGGGTAAC ACCG ATTACCCC ATTGATAACCTTTCT TERM 2091 1689528 - 1689508 - g 76 -4 -4.99134 | opp_overlap 1689512 1689518, overlap 1689512 1689513 1689519 ACTGCAAACCAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTCAAACAA TERM 2092 1689539 - 1689512 - g 74 -8.6 -3.90592 | gap 1, opp_overlap 1689512 1689518 1689528 1689531, overlap 1689508 1689513 1689519 CAAACCAAAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAGGCGTT TERM 2093 1690523 - 1690558 + G 70 -11.2 -2.7924 | gap 1, opp_overlap 1690515 1690514 1690512, overlap 1690520 1690518 ACAAGATGGGTGATA CCCTGCCGA-TGCCAAC CAA GTTTGCAATCGGCATGG TGATGTGTTCTGGTG tppB 1689487 - 1690989 + | putative tripeptide transporter permease TERM 2094 1691035 - 1691013 - f 86 -13.5 -3.30635 | opp_overlap 1691013 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTTGTTCAG TERM 2095 1691013 - 1691035 + F 100 -13.5 -6.36459 | opp_overlap 1691013 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTTGTTCAG TERM 2096 1691212 - 1691200 - g 84 -4.1 -5.28481 | opp_overlap 1691200 GATTTAATGAAAAAA CGTCT CGA AAACG GTGACGATTACTTTT TERM 2097 1691385 - 1691375 - g 70 -5.4 -4.36914 | TTTCCCGCTATAAAA CCAT CGA ATGG CTGAATTACATCGCC gst 1691095 - 1691700 + | glutathionine S-transferase pdxY 1692607 - 1691744 - | pyridoxamine kinase TERM 2098 1692653 - 1692624 - R 88 -8.5 -4.82901 | overlap 1692625 1692627 TTCCCTGTATAAAAA CCAGGGGGAGTGA TTTC TCACTCCCCCCTT CCACTGATGCATATT TERM 2099 1692652 - 1692625 - R 86 -12 -3.49419 | overlap 1692624 1692627 TCCCTGTATAAAAAC CAGGGGGAGTGA TTTC TCACTCCCCCCT TCCACTGATGCATAT TERM 2100 1692650 - 1692627 - R 100 -16.8 -3.31915 | overlap 1692625 1692624 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC CTTCCACTGATGCAT TERM 2101 1692673 - 1692698 + r 95 -13.3 -3.67976 | overlap 1692668 1692674 TGATGCATATTTCCC AGGGGGAGTGA TGTC TCACTCCCCCC TTTCCACTTAATGCA TERM 2102 1692674 - 1692697 + r 100 -16.8 -2.80464 | overlap 1692668 1692673 GATGCATATTTCCCA GGGGGAGTGA TGTC TCACTCCCCC CTTTCCACTTAATGC tyrS 1693988 - 1692714 - | tyrosyl-tRNA synthetase TERM 2103 1693096 - 1693113 + g 84 -4.1 -5.21506 | gap 1, overlap 1693071 1693068 1693093 1693097 AGTACATACTGGGCG C-GCGGTG CTT TACCGCTG TTTTTATCTTCTTCT TERM 2104 1693097 - 1693111 + g 76 -7.8 -4.20977 | overlap 1693071 1693068 1693093 1693096 GTACATACTGGGCGC GCGGTG CTT TACCGC TGTTTTTATCTTCTT pdxH 1694773 - 1694117 - | pyridoxamine 5'-phosphate oxidase TERM 2105 1694196 - 1694171 - G 73 -4 -4.83169 | gap 1 ACGCTGGTACAAAAA GCGGTCATGCA GGCGA TGC-TCACCGC CCTGCCAGAACTCAA TERM 2106 1694521 - 1694542 + g 81 -5.9 -4.78107 | gap 1, overlap 1694524 CTTTACGGCTACCGA GGT-TGGTGT AAA ACACCATGCC TTTTTCGTCGTAATG TERM 2107 1694701 - 1694716 + g 72 -7.5 -3.93262 | overlap 1694713 CGGCGGGAAGATCGC GGCGG CGTAAC CCGCC TTTGGTGTATTCACG ydhA 1695080 - 1694832 - | hypothetical protein SF1665 1696007 - 1695102 - | insertion element IS2 transposase InsD SF1666 1696375 - 1695965 - | insertion sequence 2 OrfA protein anmK 1697704 - 1696595 - | anhydro-N-acetylmuramic acid kinase TERM 2108 1696721 - 1696759 + g 100 -16.8 -3.51924 | opp_overlap 1696735 AGCCAATGCTTCCAT GTCATCGCCACTAATGCC AAC GGCATCGGTGGTGGTGAC TTCTGTGCCTAGCAG slyB 1697978 - 1698445 + | putative outer membrane protein TERM 2109 1698485 - 1698450 - T 95 -11.8 -3.90744 | opp_overlap 1698447 1698439 1698450 CTCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT TERM 2110 1698450 - 1698485 + T 86 -11.8 -3.5332 | opp_overlap 1698450, overlap 1698447 1698439 CTCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT slyA 1698926 - 1698492 - | transcriptional regulator SlyA SF1670 1699127 - 1699363 + | hypothetical protein TERM 2111 1700032 - 1700018 - g 73 -4.2 -4.79955 | opp_overlap 1700018 ATAGTGATAACAAAA CGTTAC AGG GTCACG TTTCCAGTATCGGTC SF1671 1699357 - 1700223 + | hypothetical protein TERM 2112 1701716 - 1701747 + T 70 -9.4 -3.35798 | gap 1, overlap 1701714 TCTGGCAAAAATCGT TGGCGTTGCGCTGGC TTG GCTAGCGTT-CGCCA TTCTGCGTCCAGGAT TERM 2113 1702164 - 1702141 - T 70 -10.2 -2.52516 | opp_overlap 1702141 1702142 1702143, overlap 1702140 CCCGTCATCATCAAC CTGCCGCCCG TGAG CTGGCGGCAA TTGTCTGGCGGCTGT TERM 2114 1702142 - 1702163 + T 73 -11.5 -2.6914 | opp_overlap 1702141 1702140, overlap 1702141 1702143 CCGTCATCATCAACC TGCCGCCCG TGAG CTGGCGGCA ATTGTCTGGCGGCTG sodC 1702772 - 1702236 - | superoxide dismutase TERM 2115 1702273 - 1702283 + g 72 -8.2 -3.78329 | opp_overlap 1702254 TAGCGTTCACCGCCA CCGC CCA GCGG TTTAGGTTGATCGGA TERM 2116 1702484 - 1702511 + g 81 -11.2 -3.69902 | gap 1, opp_overlap 1702483 1702481, overlap 1702506 1702508 TTTGTGGATCAAGAT GCCCGC-CTGCGG ATT CCGCGGCGCTGGC TTTGCCATCTTTGGT SF1674 1703734 - 1702838 - | hypothetical protein SF1675 1704160 - 1703783 - | hypothetical protein SF1676 1704125 - 1704724 + | hypothetical protein TERM 2117 1704711 - 1704730 + FH 81 -4.9 -5.24129 | overlap 1704712 AAAACATTATTGCGA CGCCTGC CGTTTA GCAGGCA TTTTTTATCACCAGA TERM 2118 1704712 - 1704729 + FH 72 -8.4 -3.73995 | overlap 1704711 AAACATTATTGCGAC GCCTGC CGTTTA GCAGGC ATTTTTTATCACCAG nemA 1704761 - 1705858 + | N-ethylmaleimide reductase TERM 2119 1706217 - 1706204 - g 71 -2.3 -5.01732 | overlap 1706205 AAGCGTGCGAAAAAA TCCGT CAAA ACGGG GGTAACGTGACCCGT gloA 1705939 - 1706346 + | glyoxalase I TERM 2120 1706352 - 1706379 + F 73 -9.9 -3.46647 | gap 1, overlap 1706350 AGGCAACTAATCTCC TGCCGGGCGTGA ACTCA TCGCGCCCG-CA TCTTTACTGCATCGA TERM 2121 1706472 - 1706486 + G 77 -7.1 -4.45077 | opp_overlap 1706471 TAACGCTCAACTTAC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA rnt 1706449 - 1707096 + | ribonuclease T TERM 2122 1708227 - 1708239 + T 74 -6.9 -4.19624 | GATCTGGTGATTCAG GTGGC AAC GCCGC TTTCTGTTGCCAGTG TERM 2123 1711299 - 1711279 - T 70 -9 -3.42283 | overlap 1711277 1711291 1711294 CAAGCCACGCAAACA CGCCACTA TACAC CAGTGGCG CTCTCCGCCAACGAT TERM 2124 1711785 - 1711771 - T 72 -8.5 -3.70773 | CTCCACAGGCAAGAA CGGCG TGCCC CGCCG CTAAAATGTTACGAG TERM 2125 1712266 - 1712279 + T 71 -3.8 -4.83615 | overlap 1712253 1712251 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG TERM 2126 1712612 - 1712624 + T 71 -3.4 -4.82901 | GGGAAAAGCAGCCCG CTTC CGGAA GAAG TTTTTGTAAGCCCGC TERM 2127 1712945 - 1712935 - T 76 -4.6 -5.04249 | CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT TERM 2128 1713392 - 1713347 - T 76 -8.1 -4.11216 | opp_overlap 1713360, overlap 1713348 TGGTCAGGTGGAAAA CCGCGCCTTATATCCCCGCCC TGAA GGACGAGGTTTTACGGCGCAC CGGATAAAGGACTGA TERM 2129 1713391 - 1713348 - T 78 -11.6 -3.06515 | opp_overlap 1713360, overlap 1713347 GGTCAGGTGGAAAAC CGCGCCTTATATCCCCGCCC TGAA GGACGAGGTTTTACGGCGCA CCGGATAAAGGACTG TERM 2130 1713434 - 1713401 - T 80 -9.6 -3.89346 | opp_overlap 1713404 1713424, overlap 1713404 GGCGCACCGGATAAA GGACTGACGGATGC CCGTTC GCATCCGTCAGTAT TGCAGGACGGATTAT TERM 2131 1713404 - 1713431 + T 93 -15.7 -3.01791 | opp_overlap 1713401 1713404, overlap 1713424 GCACCGGATAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT TERM 2132 1713431 - 1713404 - T 93 -15.7 -3.01918 | opp_overlap 1713404 1713424, overlap 1713401 GCACCGGATAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT ydhD 1713793 - 1713446 - | hypothetical protein TERM 2133 1714446 - 1714435 - g 70 -3.6 -4.63486 | overlap 1714422 1714421 ACGCCGTCAATAAAA CGGC CTCA GCCA GCTTTACCGAAAAGT TERM 2134 1714537 - 1714508 - g 90 -7.9 -4.81249 | gap 1 TGTGAAAGTCAAAAA TGCCGCGTCAGGAA CCC TTGCCGACGCG-CA CAAAGCGAAGGTGCA TERM 2135 1714570 - 1714557 - g 84 -8.1 -4.62471 | GCGAAGGTGCAAAAA GCCAC GAAA GTGGC AATGAATAAACTGAT ydhO 1714128 - 1714955 + | putative lipoprotein TERM 2136 1714988 - 1714958 - f 79 -9.2 -4.09511 | gap 1, opp_overlap 1714954 1714959 1714960, overlap 1714959 AACACTTCGCTAAAA CTTTACCCTGTTG TTACGG CAACAGGGT-AAG TTCATCTTTTGTCTC TERM 2137 1714959 - 1714988 + F 88 -12.3 -3.59432 | opp_overlap 1714958 1714959, overlap 1714954 1714960 ACACTTCGCTAAAAC TTTACCCTGTTGT TACG GCAACAGGGTAAG TTCATCTTTTGTCTC TERM 2138 1714960 - 1714987 + F 83 -13.6 -2.74575 | opp_overlap 1714958 1714959, overlap 1714959 1714954 CACTTCGCTAAAACT TTACCCTGTTGT TACG GCAACAGGGTAA GTTCATCTTTTGTCT sodB 1715083 - 1715664 + | superoxide dismutase TERM 2139 1715777 - 1715798 + T 100 -14.5 -5.38326 | opp_overlap 1715771 TGTCAGCAACTGTAA CGCAGAAGG TTAT CCTTCTGCG TTTTTGTTTAATTAG TERM 2140 1715826 - 1715842 + T 70 -5.1 -4.42653 | overlap 1715816 1715814 TAGCTGTTAGCAACG CAAACTG TTT CAGGTTG TTTTCTGGCTGACAT SF1685 1716979 - 1715810 - | putative transport protein TERM 2141 1717096 - 1717062 - H 72 -3 -4.96276 | ACAAAAAAATGAAAA TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA ACAAACAGGAAGGAG TERM 2142 1717582 - 1717548 - g 79 -4.4 -4.90079 | gap 1, opp_overlap 1717548, overlap 1717550 ATGGCAACAATAAAA GATGTAGC-GAAACG AGCAAA CGTTTCCACTACAAC TGTGTCACACGTGAT TERM 2143 1717630 - 1717606 - g 91 -9.3 -4.71828 | overlap 1717627 ACGTGATCAACAAAA CACGTTTCGTC GCT GAAGAAACGCG CAACGCCGTGTGGGC TERM 2144 1718070 - 1718058 - g 72 -10.5 -3.06796 | CGTTATCTGATTGAA CGCGG TCA CCGCG AAATCGGCGTCATCC TERM 2145 1718107 - 1718128 + G 81 -8.7 -4.37092 | gap 1, opp_overlap 1718105 1718107 CGCTGGAACGTAACA CCGGCGCAGG CCG CCT-TGCCGG TTTTATGAAGGCGAT TERM 2146 1718357 - 1718377 + G 74 -7.5 -4.07687 | opp_overlap 1718360 1718361, overlap 1718360 1718361 GCTGATCGGTTATGA TAACGTGCG CAA CGCGCGCTA TTTTACGCCGGCGCT TERM 2147 1718361 - 1718375 + G 73 -9.2 -3.63744 | opp_overlap 1718360 1718361, overlap 1718360 1718357 ATCGGTTATGATAAC GTGCGC AAC GCGCGC TATTTTACGCCGGCG purR 1717533 - 1718468 + | DNA-binding transcriptional repressor PurR ydhB 1719525 - 1718584 - | putative DNA-binding transcriptional regulator ydhC 1719638 - 1720849 + | inner membrane transport protein YdhC cfa 1721140 - 1722288 + | cyclopropane fatty acyl phospholipid synthase ribE 1722969 - 1722328 - | riboflavin synthase subunit alpha TERM 2148 1722527 - 1722503 - G 70 -3.5 -4.69027 | gap 1, overlap 1722495 1722504 1722505 AAATGGACGCAAAAA CGCGTTGGCG TGACTT CGCCGACG-G TCAGGCTAATACCGT TERM 2149 1723126 - 1723143 + r 80 -6.2 -4.85129 | overlap 1723141 CTGCTTCTTCTTTTT GCTGCC CATTCA GGCGGC TTTTTAGTCTCTCAT SF1692 1724599 - 1723886 - | iso-IS10R ORF SF1693 1725093 - 1724665 - | iso-IS10R ORF TERM 2150 1725933 - 1725899 - R 79 -9.4 -4.15044 | gap 1, opp_overlap 1725901 1725904, overlap 1725904 CGTCCCGCTAATAAA GACA-AGGCGCAACC TTCACG GGTTGCGCCTGTGTT TTTACGCAGGCTGGA TERM 2151 1725901 - 1725931 + r 100 -12.7 -4.57073 | gap 1, opp_overlap 1725899 1725904, overlap 1725904 TCCCGCTAATAAAGA CA-AGGCGCAACCT TCAC GGGTTGCGCCTGTG TTTTTACGCAGGCTG TERM 2152 1725927 - 1725904 - R 100 -13.9 -3.96841 | opp_overlap 1725904 1725901, overlap 1725899 CGCTAATAAAGACAA GGCGCAACC TTCACG GGTTGCGCC TGTGTTTTTACGCAG TERM 2153 1725904 - 1725927 + r 95 -14.6 -3.53855 | opp_overlap 1725899 1725904, overlap 1725901 CGCTAATAAAGACAA GGCGCAACCT TCAC GGGTTGCGCC TGTGTTTTTACGCAG SF1694 1727191 - 1725935 - | hypothetical protein TERM 2154 1726227 - 1726215 - G 74 -7.7 -4.09805 | opp_overlap 1726215 1726214 TTACCAACAATGAAA GTGAC GCT GTCAC CTTTTACCGTACTGC TERM 2155 1727368 - 1727357 - H 70 -2.2 -5.07486 | overlap 1727340 GATCCTGAATAAAAA TCGC CCTT GCAA ATCAACAAAATATAG TERM 2156 1727546 - 1727577 + H 80 -6.7 -4.76075 | gap 2, overlap 1727571 1727573 TTGACATGGTGGGGG TC-GGTG-GTTCGAG TCCA CTCGGACGCACCAGA TTTTCTTAATCTGGT TERM 2157 1727571 - 1727593 + H 76 -4.9 -4.78661 | overlap 1727546 1727573 GAGTCCACTCGGACG CACCAGATT TTCTT AATCTGGTC TTTTCCTTTTTCCCT TERM 2158 1727573 - 1727591 + H 71 -7.5 -3.99386 | overlap 1727546 1727571 GTCCACTCGGACGCA CCAGATT TTCTT AATCTGG TCTTTTCCTTTTTCC SF1695 1727683 - 1727988 + | hypothetical protein TERM 2159 1727988 - 1727970 - T 75 -9.6 -3.54676 | opp_overlap 1727966, overlap 1727966 ACTTAGTCAAATCAA TCAGGCAA AAC TCGCCTGA CAGAATTTAATCAAG TERM 2160 1728003 - 1728017 + T 79 -8.5 -4.3014 | opp_overlap 1728003 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTCATCCCTGTCT TERM 2161 1728273 - 1728289 + T 75 -10.9 -3.05844 | opp_overlap 1728271 1728269 1728268 AACTCAAAAATGATG CTGGCAA ATA TTGCCAG TATTGAAATACCGCC SF1697 1730360 - 1729548 - | hypothetical protein ydhU 1731149 - 1730364 - | hypothetical protein SF1699 1731865 - 1731146 - | putative oxidoreductase, Fe-S subunit SF1700 1732516 - 1731878 - | hypothetical protein ydhV 1734325 - 1732529 - | hypothetical protein TERM 2162 1732622 - 1732635 + g 70 -4.5 -4.55295 | opp_overlap 1732618, overlap 1732617 TGGACAACCAAGCTG TGGGT CCCA GCCCA TTTCTTTGTAGAACA TERM 2163 1733705 - 1733721 + g 75 -4.3 -4.87037 | opp_overlap 1733708, overlap 1733706 ACAACGGATCGGGCA AGAGTGG CAG CCGCTCA TTTTTACTGTGTATT SF1702 1735277 - 1734651 - | hypothetical protein TERM 2164 1735462 - 1735452 - R 79 -2.6 -5.31275 | opp_overlap 1735452 GGTTAGGAGAAAAAA TAAT GTG ATTA TTCTGAGCCCTTAAC TERM 2165 1735729 - 1735698 - R 77 -8.9 -3.83675 | gap 1, opp_overlap 1735695, overlap 1735700 CAACTGAAGCAAGAA TATCAGGATGAAGC TTACC GCCTCATCCTGA-A TGGTCATTTTACCAG TERM 2166 1735728 - 1735700 - R 93 -14 -3.4945 | opp_overlap 1735695, overlap 1735698 ACTGAAGCAAGAATA TCAGGATGAAGC TTACC GCCTCATCCTGA ATGGTCATTTTACCA SF1703 1735942 - 1735733 - | hypothetical protein insB 1736223 - 1736726 + | IS1 ORF2 TERM 2167 1738235 - 1738247 + G 81 -9.1 -4.08706 | opp_overlap 1738234 1738232 1738235 GCAAAAGGTAAATAC CCGCT GGA AGCGG TTTCTATCATGGCGA pykF 1737275 - 1738687 + | pyruvate kinase TERM 2168 1738736 - 1738720 - f 74 -10.8 -3.12847 | opp_overlap 1738720 AATTTGTATATCGAA GCGCCC CTGAT GGGCGC TTTTTTTATTTAATC TERM 2169 1738720 - 1738736 + F 100 -10.8 -5.99154 | opp_overlap 1738720 AATTTGTATATCGAA GCGCCC CTGAT GGGCGC TTTTTTTATTTAATC TERM 2170 1739161 - 1739136 - g 70 -9.7 -3.17212 | gap 1 TGACCAGCTGAGCAA CGACGTGAACGC AAT GCGTTC-CGACG TTCAGGCTGCTAAAG lpp 1738999 - 1739235 + | murein lipoprotein TERM 2171 1739275 - 1739257 - T 100 -14.6 -4.74103 | opp_overlap 1739257 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTCTGCTA TERM 2172 1739257 - 1739275 + T 100 -14.6 -5.74122 | opp_overlap 1739257 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTCTGCTA ynhG 1740302 - 1739298 - | hypothetical protein TERM 2173 1740132 - 1740153 + g 71 -2.1 -4.88388 | opp_overlap 1740133 1740135, overlap 1740133 TGCTGCAGTATCAAA ACGTCGGGC AATA GCCTGAAGG TTTTTATCCCCTTCT ynhA 1740867 - 1740451 - | cysteine desufuration protein SufE SF1709 1741814 - 1743022 + | iso-IS10R ORF ynhC 1744706 - 1743435 - | cysteine desulfurase activator complex subunit SufD sufC 1745427 - 1744681 - | cysteine desulfurase ATPase component ynhE 1746924 - 1745437 - | cysteine desulfurase activator complex subunit SufB TERM 2174 1746585 - 1746574 - G 81 -7.2 -4.65895 | opp_overlap 1746573 CTCTTTACTTAAAAA GGCG TTCG CGCC AGTTTGCTGCACCGC sufA 1747301 - 1746933 - | iron-sulfur cluster assembly scaffold protein TERM 2175 1747624 - 1747594 - R 100 -17 -5.05116 | opp_overlap 1747594 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG TERM 2176 1747594 - 1747624 + r 100 -19.2 -3.86897 | opp_overlap 1747594 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG SF1715 1748118 - 1747849 - | hypothetical protein TERM 2177 1748094 - 1748059 - G 74 -9.8 -3.48276 | overlap 1748061 1748062 CTCGCTTTTAGACAA GACCTGCACAGTATAC CACC GTTTACTGTGCAGATA ATGACCAAAAGCAAT TERM 2178 1748092 - 1748061 - G 83 -12.4 -3.31726 | overlap 1748059 1748062 CGCTTTTAGACAAGA CCTGCACAGTATAC CACC GTTTACTGTGCAGA TAATGACCAAAAGCA TERM 2179 1748091 - 1748062 - G 84 -13.7 -2.58822 | overlap 1748061 1748059 GCTTTTAGACAAGAC CTGCACAGTATAC CACC GTTTACTGTGCAG ATAATGACCAAAAGC TERM 2180 1748172 - 1748145 - R 70 -4.8 -4.43859 | overlap 1748147 GACAACGTCACAAAA TGGCGGTCGTCA ATCG TGACGAACAGCA CAAACGCCCTTTCTC SF1716 1748547 - 1748137 - | hypothetical protein ydiJ 1751600 - 1748544 - | putative oxidase TERM 2181 1751202 - 1751181 - G 76 -3.7 -5.00616 | opp_overlap 1751195 TTCCGGCGCAAAAAA GTAGCCGAA CGGT TTCAGGTAC TGATTGAGTTGGTCT SF1718 1751989 - 1753101 + | putative inner membrane protein TERM 2182 1753140 - 1753098 - f 72 -8.4 -3.80019 | opp_overlap 1753109, overlap 1753103 CGAGAAACCGAATAA GTAATTTCTCATCAGGCGGC TCT GCCGCCTGATTGTTAATCAC CGCTAATTGATATTT TERM 2183 1753109 - 1753129 + F 100 -16.9 -3.72027 | opp_overlap 1753103 1753098 ATAAGTAATTTCTCA TCAGGCGGC TCT GCCGCCTGA TTGTTAATCACCGCT TERM 2184 1753365 - 1753384 + F 100 -3.5 -5.82388 | overlap 1753366 CTGTGTGTAGTCTTT TCCCATC TCCCAC GATGGGC TTTTTTTTAACATTT TERM 2185 1753366 - 1753383 + F 71 -7 -4.06993 | overlap 1753365 TGTGTGTAGTCTTTT CCCATC TCCCAC GATGGG CTTTTTTTTAACATT SF1719 1753530 - 1753886 + | hypothetical protein SF1720 1754046 - 1755191 + | putative transport system permease protein SF1721 1755485 - 1756645 + | putative amino acid/amine transport protein TERM 2186 1757120 - 1757108 - g 70 -3.5 -4.66535 | opp_overlap 1757096 AAGGTTTAAAAGAAA TTAAA CTC TTTAA CCGTCGGGATGAGTT aroE 1756657 - 1757523 + | quinate/shikimate dehydrogenase TERM 2187 1758259 - 1758244 - g 91 -5.4 -5.40072 | gap 1 GGTGCGGTAAAAAAA GCCTCTG CGC CAG-GGC AAATCTCGGTAAATG aroD 1757554 - 1758312 + | 3-dehydroquinate dehydratase TERM 2188 1758353 - 1758320 - T 84 -10.4 -3.86312 | overlap 1758352 AGGCATAAGCAATAA TATTTCGGCGGAAA TACCCT CCCCCGCCGAAATA AAAAAAGTATTTTTA insB 1758789 - 1758394 - | IS1 ORF2 insA 1759091 - 1758816 - | IS1 ORF1 ydeN 1759201 - 1760691 + | putative sulfatase TERM 2189 1760703 - 1760724 + F 82 -11.5 -3.61715 | opp_overlap 1760697, overlap 1760704 ATAACTAAACCTTCA TGCGGCGGA TTTT TCCGCCGCC TTATTGAGCGAGATA TERM 2190 1760704 - 1760723 + F 93 -15 -2.76815 | opp_overlap 1760697, overlap 1760703 TAACTAAACCTTCAT GCGGCGGA TTTT TCCGCCGC CTTATTGAGCGAGAT TERM 2191 1761012 - 1760998 - g 70 -3.6 -4.62783 | overlap 1760999 TATGCAGGCCAAAAA CGTATT TTT AATACA TTACAAACGAATGGC SF1727 1760743 - 1761900 + | putative enzyme TERM 2192 1761954 - 1761979 + F 83 -10.5 -3.80841 | opp_overlap 1761953 1761952 1761956 ATGACCTTAACAAGG CACCCGACA TAAATTCC TGTCGGGTG TTTCGTCATCATCAT TERM 2193 1762420 - 1762442 + F 76 -7.6 -4.2586 | GGCAGCTCGTTCTTT GGTTCCCTGC CCT GCTGGGGATC TTTGTATTAATATCC TERM 2194 1765653 - 1765637 - g 78 -7.9 -4.39989 | ATCAAATCAGCAAAA GCAGTCG TAC CGACAGC GCGACTAAAACCACC yddB 1763914 - 1766274 + | hypothetical protein insB 1767047 - 1766544 - | IS1 ORF2 TERM 2195 1767642 - 1767620 - g 81 -11.2 -3.62572 | opp_overlap 1767633 1767634, overlap 1767621 CATCAGGATGCGAAA TGGCGCACCT CTC AGGCGCGCCG CCCTTTCCTGCTGGC TERM 2196 1767641 - 1767621 - g 90 -14.7 -2.77222 | opp_overlap 1767633 1767634, overlap 1767620 ATCAGGATGCGAAAT GGCGCACCT CTC AGGCGCGCC GCCCTTTCCTGCTGG SF1731 1767122 - 1769053 + | hypothetical protein insA 1769087 - 1769362 + | IS1 ORF1 insB 1769389 - 1769784 + | IS1 ORF2 TERM 2197 1769938 - 1769902 - f 76 -8.7 -4.18506 | opp_overlap 1769907 1769908 1769937, overlap 1769905 1769908 TTATTGCCAAAATAA TAACAGCCCCGTCAACA CAT CGTTGGCGGGGATTTTA GCAATATTCGCTATT TERM 2198 1769907 - 1769933 + F 83 -10.1 -4.14472 | opp_overlap 1769905 1769902 1769908, overlap 1769908 GCCAAAATAATAACA GCCCCGTCAAC ACATC GTTGGCGGGGA TTTTAGCAATATTCG TERM 2199 1769908 - 1769932 + F 85 -13.6 -3.08201 | opp_overlap 1769905 1769902 1769908, overlap 1769907 CCAAAATAATAACAG CCCCGTCAAC ACATC GTTGGCGGGG ATTTTAGCAATATTC TERM 2200 1769932 - 1769908 - f 77 -12.1 -2.80636 | opp_overlap 1769908 1769907, overlap 1769905 1769902 CCAAAATAATAACAG CCCCGTCAACA CAT CGTTGGCGGGG ATTTTAGCAATATTC TERM 2201 1769937 - 1769951 + F 72 -2.8 -5.01497 | opp_overlap 1769902 CGTTGGCGGGGATTT TAGCAA TAT TCGCTA TTTTTATGTAATAAT TERM 2202 1770991 - 1771005 + G 78 -9.2 -3.86822 | overlap 1770999 GACATGCACATCGAC GCCGCC AGC GGTGGC TTTCTGGCACCGTTC gadB 1770262 - 1771662 + | glutamate decarboxylase isozyme TERM 2203 1771681 - 1771710 + F 82 -11.5 -3.57387 | opp_overlap 1771692 1771696, overlap 1771684 CGTTTAACGGTAACG GTGTCCCGAAACG AACC CGTTTCGGGATAA TTTCCAAAGTCTGTT TERM 2204 1771684 - 1771707 + F 93 -15.4 -2.91322 | opp_overlap 1771692 1771696, overlap 1771681 TTAACGGTAACGGTG TCCCGAAACG AACC CGTTTCGGGA TAATTTCCAAAGTCT TERM 2205 1771776 - 1771748 - f 76 -7.6 -4.30416 | overlap 1771750 ATTAGCAACGGAAAA TATTGTTCTGAA TACGC TTCAGAACAAAA CAGGTGCGGTTCCGA TERM 2206 1771774 - 1771750 - f 83 -10.2 -3.75051 | overlap 1771748 TAGCAACGGAAAATA TTGTTCTGAA TACGC TTCAGAACAA AACAGGTGCGGTTCC TERM 2207 1771951 - 1771968 + G 75 -5.5 -4.67256 | TTTCATTAGTCTTCT TCCTGCT ATTA GGCGGGA TTTTATGGTTTATTC TERM 2208 1772799 - 1772786 - g 71 -3.1 -4.8667 | gap 1, opp_overlap 1772791, overlap 1772787 1772788 CACAGCGCAGAAAAA CCTGCT GCC AGC-GG CATTCGCTAAAATGA xasA 1771818 - 1773353 + | acid sensitivity protein, putative transporter TERM 2209 1773379 - 1773401 + F 100 -13.5 -4.81685 | opp_overlap 1773379 ATGGTTATAAGACAA GGGAGCGAT AATTC ATCGCTCCC TTTTTCGTGCTTGCT TERM 2210 1773401 - 1773379 - f 100 -14.2 -3.75378 | opp_overlap 1773379 ATGGTTATAAGACAA GGGAGCGATA ATT CATCGCTCCC TTTTTCGTGCTTGCT SF1736 1773484 - 1774803 + | hypothetical protein TERM 2211 1774818 - 1774858 + F 85 -12.7 -3.34962 | opp_overlap 1774828, overlap 1774819 1774828 AACTACCATGCTTAC TTTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACACC TTGTGAAATATCCCA TERM 2212 1774819 - 1774857 + F 90 -16.2 -2.60763 | opp_overlap 1774828, overlap 1774818 1774828 ACTACCATGCTTACT TTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACAC CTTGTGAAATATCCC TERM 2213 1774848 - 1774828 - f 75 -9.7 -3.62597 | opp_overlap 1774819 1774818 1774828 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 2214 1774828 - 1774848 + F 79 -9.7 -3.66028 | opp_overlap 1774828, overlap 1774819 1774818 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 2215 1775121 - 1775131 + F 74 -6.8 -4.27062 | GCAGTTAGTCGATCT CGCA CGT TGCG TTTCGTTTTGATTCC yddV 1775180 - 1776325 + | hypothetical protein TERM 2216 1776881 - 1776894 + F 93 -9.5 -4.55798 | GACAAATTCCTCTCG CCCGC ACTC GCGGG TTTTCCTTTAAGGTG TERM 2217 1777924 - 1777934 + F 77 -6.8 -4.41616 | GCACTGGCTGCCGCT CTCG GGC CGAG TTTATTTAACGCCAT SF1741 1778364 - 1779350 + | putative ATP-binding component of a transport system SF1742 1779343 - 1780113 + | ATP-binding protein of oligopeptide ABC transport system TERM 2218 1780153 - 1780163 + T 73 -2.4 -5.24129 | opp_overlap 1780143 GGAAACCGCACGTTG CCGC AAG GCTG TTTTTTCTACGAACG TERM 2219 1780309 - 1780282 - T 86 -11.3 -3.67558 | TAGAGATGCTAACAA CGCATCAGGCA TTCACG CGCCTGACGCG TCATCCGGCAATGCT osmC 1780756 - 1780325 - | osmotically inducible protein insB 1781324 - 1780929 - | IS1 ORF2 insA 1781626 - 1781351 - | IS1 ORF1 TERM 2220 1781717 - 1781696 - H 95 -13.1 -3.82031 | opp_overlap 1781696 CCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTATCTGCTTTA TERM 2221 1781696 - 1781717 + H 100 -13.1 -5.06585 | opp_overlap 1781696 CCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTATCTGCTTTA TERM 2222 1782178 - 1782188 + G 72 -6.8 -4.2074 | overlap 1782171 AGATCTACCGCCGTT CACG CGG CGTG TTTATCTCTTACCAG TERM 2223 1782597 - 1782569 - g 95 -6.8 -5.40072 | gap 1 CTTTGCTCAAAAAAA TGCGAT-GCCGTT ACTT AACCGCTATCGCA ATGAAATTTGTTCTT TERM 2224 1783214 - 1783231 + G 78 -10.5 -3.49048 | overlap 1783212 CAACGCCTTTATTTT CCCGGGC ATCG GCCTGGG TGTTATTGCTTCCGG sfcA 1781814 - 1783511 + | malate dehydrogenase TERM 2225 1783518 - 1783541 + F 70 -8.8 -3.4404 | opp_overlap 1783512, overlap 1783517 1783519 TCCATCTAAGCCTGC ACCCGGTAGT GAAG GCTACCGGGC TATTTCCCTCTCCCT TERM 2226 1783519 - 1783540 + F 78 -12.3 -2.65942 | opp_overlap 1783512, overlap 1783518 1783517 CCATCTAAGCCTGCA CCCGGTAGT GAAG GCTACCGGG CTATTTCCCTCTCCC adhP 1783645 - 1784655 + | alcohol dehydrogenase yddM 1784723 - 1785085 + | hypothetical protein TERM 2227 1785109 - 1785090 - T 86 -4.2 -5.4833 | TTACGCAATAAAAAA TGGCACCC TATA AAGCGCCA TTTGAAACTGATGAC TERM 2228 1785293 - 1785262 - T 86 -13.9 -3.21395 | opp_overlap 1785268, overlap 1785268 ACGTTGTCTACAATA TGAAAATGGCGCC TTTTAC AGCGCCATTTTCA GCTTAAAGTTCAAAA TERM 2229 1785287 - 1785268 - T 77 -7.1 -4.46656 | opp_overlap 1785268, overlap 1785262 TCTACAATATGAAAA TGGCGCC TTTTAC AGCGCCA TTTTCAGCTTAAAGT fdnI 1785966 - 1785313 - | formate dehydrogenase-N subunit gamma TERM 2230 1785827 - 1785777 - G 72 -6.6 -4.26076 | opp_overlap 1785775 1785813, overlap 1785763 1785760 TCAGTGCGACGAAAA TCGCAATGCCGAAGAAGGGGTGCA AAA TGCGTCCCATCTGCGGCGTACCGA AGGTTTGCGTCAGCC fdnH 1786843 - 1785959 - | formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit TERM 2231 1786057 - 1786069 + g 71 -9.1 -3.5394 | opp_overlap 1786052 1786056, overlap 1786066 TGGCAATAAAGCCAG CCGCT GCC AGCGG TTTCAACGCGCCTTT fdnG 1789903 - 1786856 - | formate dehydrogenase-N, nitrate-inducible, alpha subunit TERM 2232 1788888 - 1788913 + g 70 -3.9 -4.60487 | overlap 1788889 1788890 1788909 TCATCGAACTGATAG TTCCAGGACGA TTTG TCGTACTGGCG TTTTTCAGCGTCATA TERM 2233 1789129 - 1789157 + g 90 -7.6 -4.75174 | gap 1 GCGTAAAACGGGGAT CGACAACGAT-CA AGGT TGCATCGTTGTTG TTTTTCGCTTCCATC TERM 2234 1789682 - 1789694 + g 71 -2.6 -5.02074 | overlap 1789673 TTCAATGTGATAAAT CGCT TCTCT GGCG TTTTTTGCGCCATCA yddG 1790135 - 1791016 + | hypothetical protein TERM 2235 1791047 - 1791019 - T 95 -11.7 -4.07687 | opp_overlap 1791022, overlap 1791022 1791023 ACGTCGTGGTTAAAA TAATTGCCGGGTC TAC GGCCCGGCAGTTA ATCAGATAAATTCCG TERM 2236 1791022 - 1791044 + T 83 -13.4 -3.1706 | opp_overlap 1791019 1791022 1791023 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 2237 1791044 - 1791022 - T 79 -9 -4.17048 | opp_overlap 1791022, overlap 1791019 1791023 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 2238 1791043 - 1791023 - T 80 -12.5 -3.09908 | opp_overlap 1791022, overlap 1791022 1791019 CGTGGTTAAAATAAT TGCCGGGTC TAC GGCCCGGCA GTTAATCAGATAAAT insB 1791614 - 1791219 - | IS1 ORF2 insA 1791916 - 1791641 - | IS1 ORF1 SF1755 1792048 - 1793148 + | putative outer membrane porin protein TERM 2239 1793162 - 1793181 + F 100 -10.7 -5.00138 | AACGTCCTCTCCTGA CCAGCCC TTCTCT GGGCTGG TTTTTGATTTAAGTG SF1756 1793312 - 1793797 + | hypothetical protein TERM 2240 1794874 - 1794860 - g 71 -2.2 -4.91573 | opp_overlap 1794861, overlap 1794861 AAAACAGAGCAAAAA CTTAAA TTT TTTAAA TGTTTCTGGGAAGAA SF1757 1793907 - 1794896 + | putative glycoprotein TERM 2241 1795135 - 1795118 - f 73 -4.1 -4.89729 | TATAAAAGTTAAAAA CATGACC TTAG GGTAATG CTGCCAACTTACTGA insA 1795184 - 1795459 + | IS1 ORF1 insB 1795486 - 1795881 + | IS1 ORF2 TERM 2242 1797347 - 1797369 + G 72 -8.5 -3.79021 | gap 1 CTGCTGTTCCTTACC TTACCGG-GC ACAG GCTCCGGTAA TTTCATCGCCTTTTA TERM 2243 1797569 - 1797583 + G 85 -2.7 -5.4505 | TTTATCTCAGCCATT GGCGC AGTGG GCGGC TTTTTTATTCCGCAG narU 1796339 - 1797727 + | nitrite extrusion protein 2 TERM 2244 1798095 - 1798076 - f 74 -10.6 -3.27298 | opp_overlap 1798070 CTGCCCAATCATGAA CCTCGCGG CTGC CCGCGTGG CGCAAGTTACTCCTG TERM 2245 1798726 - 1798706 - f 75 -9.7 -3.64703 | overlap 1798709 TGGCTGGCACCGAAA CAAGGCACT GAT AGCGCCCTG GCGATGGCAATGGGG TERM 2246 1798723 - 1798709 - f 71 -7.8 -3.96216 | overlap 1798706 CTGGCACCGAAACAA GGCACT GAT AGCGCC CTGGCGATGGCAATG TERM 2247 1799032 - 1799006 - f 73 -4.5 -4.82901 | gap 1 CGCTGGGGAGAAAAA GGCAAATGGAAT CTGG AATCCATT-GCC GCCGGTACGGAAACC SF1762 1801546 - 1802478 + | nitrate reductase 1, beta subunit TERM 2248 1802634 - 1802620 - g 74 -10 -3.44284 | opp_overlap 1802620 1802619, overlap 1802618 TTTTGACGAAGAAGA CGCAGA AGT TCTGCG CTTTGATAGTTTTGA SF1763 1802456 - 1802878 + | putative IS91 ORF2 TERM 2249 1802965 - 1802944 - g 70 -7.2 -4.06419 | opp_overlap 1802941 TGGCTGGAGAAACAA CCGGAAGG GGCAGT CCGTCCGG TGGTAATTGAATCAG TERM 2250 1803290 - 1803275 - g 73 -9 -3.63805 | ATGTGATACTGGAAA TCTGCC ATCA GGCAGA TGTGGAGCCGGGGAT SF1764 1802878 - 1804065 + | IS91 orf TERM 2251 1804310 - 1804329 + T 89 -11.4 -4.06903 | opp_overlap 1804305 TGAGTAATTACTTGA TGCCCGGT ATTT GCCGGGCA TTTAATTTAACGATT SF1765 1805058 - 1804336 - | putative DNA-binding transcriptional regulator TERM 2252 1805134 - 1805162 + r 70 -9.1 -3.34895 | opp_overlap 1805137 1805143 1805149, overlap 1805137 1805142 1805143 AATGACGTGGTTAGT TAATTAAAACTGA AAT TCAGCTTTAATTA TTAATTAAAGCTGAA TERM 2253 1805142 - 1805184 + r 72 -5 -4.69027 | opp_overlap 1805137 1805143 1805149, overlap 1805137 1805134 1805143 GGTTAGTTAATTAAA ACTGAAATTCAGCTTTAATT ATT AATTAAAGCTGAAAATAAGC TTTTTGCCTGGATTT TERM 2254 1805183 - 1805143 - R 81 -8.5 -4.43477 | opp_overlap 1805137 1805134 1805143 1805142, overlap 1805137 1805149 GTTAGTTAATTAAAA CTGAAATTCAGCTTTAATT ATT AATTAAAGCTGAAAATAAG CTTTTTGCCTGGATT TERM 2255 1805177 - 1805149 - R 100 -14.9 -3.96452 | opp_overlap 1805137 1805134 1805143 1805142, overlap 1805137 1805143 TAATTAAAACTGAAA TTCAGCTTTAATT ATT AATTAAAGCTGAA AATAAGCTTTTTGCC yncB 1806359 - 1805163 - | putative oxidoreductase TERM 2256 1805196 - 1805227 + g 74 -5.8 -4.46212 | overlap 1805197 AAGCTTTTTGCCTGG ATTTTTATGGCGGC TTAC GCCGCCGTTGAAAC TTTTATCATCACCCG SF1767 1807301 - 1806396 - | insertion element IS2 transposase InsD SF1768 1807624 - 1807259 - | insertion sequence 2 OrfA protein SF1769 1807783 - 1808301 + | putative resistance protein SF1770 1808298 - 1808747 + | hypothetical protein SF1771 1808981 - 1808748 - | hypothetical protein SF1772 1809315 - 1809067 - | hypothetical protein TERM 2257 1809287 - 1809269 - G 71 -3.1 -4.75472 | gap 1, opp_overlap 1809271 1809272, overlap 1809270 1809271 GCCATATGAATAAAA CGCGCGCA AATA TGCGC-CA TTTTTTGACGTGCAT SF1773 1810741 - 1809932 - | putative acetyltransferase TERM 2258 1810944 - 1810913 - R 76 -8 -4.32482 | overlap 1810914 1810916 ACTCAGAACCTAAAA CGATAGTGGCCGTC CTAT AACAGCCACTAACA TCTAACTTAATGTTT TERM 2259 1810941 - 1810916 - R 74 -10.5 -3.14977 | overlap 1810914 1810913 CAGAACCTAAAACGA TAGTGGCCGTC CTAT AACAGCCACTA ACATCTAACTTAATG SF1774 1812375 - 1810951 - | gamma-aminobutyraldehyde dehydrogenase SF1775 1813191 - 1812397 - | putative transport system permease protein TERM 2260 1812780 - 1812767 - G 70 -3.8 -4.68994 | ACCACTACGCAAAAA GTCG CATGAC CGAC CACGATGGTGAAAAA TERM 2261 1813517 - 1813497 - H 75 -9.7 -3.54919 | overlap 1813485 AATGACGGCGGCAAA CGCTCAAGC GCC GCCTGAACG GGCAGGATCATCGAG TERM 2262 1814117 - 1814096 - g 70 -7.2 -4.06419 | opp_overlap 1814093 TGGCTGGAGAAACAA CCGGAAGG GGCAGT CCGTCCGG TGGTAATTGAATCAG TERM 2263 1814442 - 1814427 - g 73 -9 -3.63805 | ATGTGATACTGGAAA TCTGCC ATCA GGCAGA TGTGGAGCCGGGGAT SF1777 1813871 - 1815217 + | IS91 orf TERM 2264 1815665 - 1815678 + T 71 -3.8 -4.83615 | overlap 1815652 1815650 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG TERM 2265 1816011 - 1816023 + T 71 -3.4 -4.82901 | GGGAAAAGCAGCCCG CTTC CGGAA GAAG TTTTTGTAAGCCCGC TERM 2266 1816344 - 1816334 - T 76 -4.6 -5.04249 | CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT TERM 2267 1816759 - 1816778 + T 71 -7 -4.07568 | opp_overlap 1816747 1816746 AACCGCGCCTTATAT CCCCGCCC TGAA GGATGGGG TTTTACGGCGCACCG TERM 2268 1816821 - 1816802 - T 100 -13.6 -4.85599 | CGCACCGGATAAAAA GCGCCATC TAAC GATGGCGC GTCTGGAACTACTTT SF1779 1817487 - 1816990 - | hypothetical protein TERM 2269 1817235 - 1817259 + g 78 -8.6 -4.2558 | opp_overlap 1817235 AAATTTTATCCAGAA CTTTCTGCCC TACCT GGGTAGAAGG TTTTGGTACCGGATA TERM 2270 1817357 - 1817346 - G 70 -5.8 -4.28774 | opp_overlap 1817346 CTACCCAACGTAAAA CAGG TTTA CCTG TTGCTGAGGTTGTTT tehB 1818383 - 1817790 - | tellurite resistance protein TehB TERM 2271 1817844 - 1817873 + g 73 -9.2 -3.58428 | AATACGATTACCGTT GGCGTCGGTGCG GTGCAG CTCGCCGACGTC TTCATTGTATTTCAC tehA 1819372 - 1818380 - | potassium-tellurite ethidium and proflavin transporter TERM 2272 1818890 - 1818872 - G 72 -5.3 -4.56597 | gap 1, overlap 1818874 GCCTGCGCCTAAAAA CACCAGAC CGGC GTC-GGTG TAGCCCAACGCACCA TERM 2273 1820045 - 1820057 + G 77 -3.3 -5.0925 | opp_overlap 1820045 TATGCTTTTATTGAA CATCG CGC CGAAG TTTTTGATTTTGCCA SF1782 1819496 - 1820476 + | hypothetical protein rimL 1821007 - 1820471 - | ribosomal-protein-L7/L12-serine acetyltransferase TERM 2274 1820598 - 1820562 - G 74 -6.5 -4.5442 | opp_overlap 1820566 1820574 1820596, overlap 1820563 1820566 CCTTCAAGGATAAAA CCATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTGT CCACCCGACATTTGA TERM 2275 1820597 - 1820563 - G 72 -10 -3.3217 | opp_overlap 1820566 1820574 1820596, overlap 1820562 1820566 CTTCAAGGATAAAAC CATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTG TCCACCCGACATTTG TERM 2276 1820566 - 1820594 + g 83 -12.5 -3.28791 | opp_overlap 1820566 1820563 1820562, overlap 1820574 CAAGGATAAAACCAT TGCGCAAAGCGAC CTG GTTGCTTTGCGGA TTGTCCACCCGACAT TERM 2277 1821059 - 1821043 - R 100 -10.8 -5.00616 | GCTGTTGTTAAAAAA GCCGCC TGGCT GGCGGC TTAGGAAAGTTTACA TERM 2278 1821089 - 1821101 + r 73 -7.7 -4.13282 | ACCTCTTTGACGCTC TCCTG CTG CAGGA TTTTGAGCATCTCAT ydcH 1821237 - 1821070 - | hypothetical protein TERM 2279 1821421 - 1821398 - gR 90 -14.6 -2.90075 | TCGTGTTTAACCAGA CGGCACCTCC CGAA GAAGGTGCCG AAGAAAAAACGATTA mdoD 1823089 - 1821434 - | glucan biosynthesis protein D SF1785 1821310 - 1821513 + | hypothetical protein TERM 2280 1822623 - 1822611 - GT 74 -6.9 -4.21827 | opp_overlap 1822612 1822613, overlap 1822612 TTAAACACGCGAAAA CCGGC AAA GCCGA GATCGCTTTGCCCTT SF1787 1824657 - 1823314 - | hypothetical protein TERM 2281 1824299 - 1824282 - G 75 -5.5 -4.7078 | GTAAGGATGTAAAAA CGCGGAA GGGA TTACGCG CCAGAGAAGCATCAT SF1788 1824733 - 1825797 + | putative LYSR-type transcriptional regulator trg 1827475 - 1825835 - | methyl-accepting chemotaxis protein III, ribose sensor receptor TERM 2282 1826745 - 1826757 + g 95 -9.1 -5.10497 | TCATTCATCGTCAGA TCGCC ACT GGCGA TTTTTTCAATCCGTT TERM 2283 1828023 - 1828007 - g 76 -3.7 -4.92363 | AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGCGTTAGTGC SF1790 1827851 - 1828333 + | IS150 ORF1(ORF A) SF1791 1829148 - 1828330 - | IS600 ORF2 SF1792 1829486 - 1829184 - | IS600 ORF1 TERM 2284 1829742 - 1829710 - R 93 -10.7 -4.55128 | opp_overlap 1829710 AGCCTGAAATTAAAA GGTCTGACTCCAA ATGAATA TCGGAATCAGACC TATATGCCTCGTGTT ydcA 1830255 - 1830082 - | hypothetical protein TERM 2285 1830226 - 1830211 - G 70 -5.4 -4.38712 | GGCATCGGCATAAAA GGAAAC AAGC GTTCCC ATAAACAAAATAAGT TERM 2286 1830450 - 1830482 + r 78 -4.9 -4.92385 | overlap 1830449 1830452 TAGACCCGTATTCTT CGCCTGTACCA CGGGTCGGTTT TAGTACAGGCG TTTTCTTTAAATATC cybB 1831030 - 1830500 - | cytochrome b561 SF1795 1831219 - 1831971 + | putative glyceraldehyde-3-phosphate dehydrogenase A gapC 1831968 - 1832219 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2287 1832226 - 1832251 + T 83 -10.4 -3.71527 | overlap 1832228 AAACTCTGACGCGCA CAGGCGGAGG AAAAAA CCTCCGCCTC TTTCACTCATTAAGA TERM 2288 1832228 - 1832249 + T 86 -13 -3.43853 | overlap 1832226 ACTCTGACGCGCACA GGCGGAGG AAAAAA CCTCCGCC TCTTTCACTCATTAA aldA 1833700 - 1832261 - | aldehyde dehydrogenase A TERM 2289 1833857 - 1833893 + H 82 -8 -4.62069 | overlap 1833858 TAAAAGTCAGGAGTC ATGCCCGTTTGCAAAC AAGTG GTTCACAAACGGGCAA TTTTTAACGTAACGA TERM 2290 1833858 - 1833892 + H 79 -11.5 -3.3692 | overlap 1833857 AAAAGTCAGGAGTCA TGCCCGTTTGCAAAC AAGTG GTTCACAAACGGGCA ATTTTTAACGTAACG SF1799 1834975 - 1835277 + | IS911 ORF1 TERM 2291 1835383 - 1835363 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 2292 1835735 - 1835724 - g 77 -5.8 -4.63218 | opp_overlap 1835729 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SF1800 1835304 - 1836143 + | IS911 ORF2 SF1801 1836188 - 1836901 + | IS600 ORF2 hrpA 1840947 - 1837102 - | ATP-dependent RNA helicase HrpA TERM 2293 1838267 - 1838224 - G 72 -5.2 -4.57073 | opp_overlap 1838222 1838223 1838224 GACGCGGCCTAAAAA CGCTTCGGCGTAGTTTGGTG CAGG CACAAAATTACGGCGTACCG GTTTCGGCAACGATT TERM 2294 1839351 - 1839372 + g 71 -2.9 -4.7373 | overlap 1839356 CGAGGAAGTCGGATT CTTTGTCGT GGAA GCGACGATG TTTTTCGTCCGATGC TERM 2295 1841009 - 1841035 + H 75 -3.1 -5.10933 | gap 1, overlap 1841015 TGTTCTGTCATAACG TTAGT-GGGCAG TAGT CTGCCTGATTAA TTTTCTTTTAAATGA acpD 1841205 - 1841810 + | azoreductase SF1804 1842573 - 1842875 + | IS600 ORF1 SF1805 1842911 - 1843729 + | IS600 ORF2 SF1807 1844480 - 1843770 - | hypothetical protein SF1808 1846188 - 1844431 - | hypothetical protein SF1809 1846947 - 1846204 - | putative phosphatidate cytidiltransferase TERM 2296 1846249 - 1846237 - G 100 -3.3 -6.17669 | AATAAAATAAAAAAA TACCG GAG CGGTG AAAATTAATGAGTCA TERM 2297 1846875 - 1846856 - G 70 -3.6 -4.68506 | opp_overlap 1846856 AACCAACGCGAAAAA TGTACG GATATAAG CGTACA ATATTCTTTCAATGC SF1810 1847704 - 1847099 - | hypothetical protein TERM 2298 1847531 - 1847521 - G 71 -2.4 -4.89852 | CCATACGGATAAAAA GCAC GAT GGGC AATAGCAAAAAGAGG ydbD 1849509 - 1847875 - | hypothetical protein TERM 2299 1848573 - 1848583 + g 72 -5.4 -4.58283 | GTTTCATCGACGTGC TCAG ATA CTGA TTTTTCGCCAGATTA TERM 2300 1849608 - 1849624 + H 78 -5.9 -4.87665 | TCATCAGCGCTTTTT TGACATT TTC AGTGTCA TTTTTGTCACTCGCA insB 1850298 - 1850801 + | IS1 ORF2 TERM 2301 1850933 - 1850978 + T 71 -3.3 -4.88736 | overlap 1850934 AAAGCGGTTACACAT GCTGCCGGAAATCATCATT TTTTCACC AAAGCTGATTTCTGGCGGA TTTTTATCGCTGGTC TERM 2302 1851230 - 1851208 - T 86 -14.9 -2.74012 | GGATTATCTGAATCA GCTCCCCTG GATTG CAGGGGAGC TGCAAGATTAAACCA ldhA 1852227 - 1851238 - | D-lactate dehydrogenase TERM 2303 1852005 - 1852030 + g 84 -7.5 -4.66953 | opp_overlap 1851995, overlap 1852003 TGAAACCGGCACAGC GCAGGGCGATA TATT TAACGCCGTGC TTTTTCAGCTCTTCC TERM 2304 1853434 - 1853409 - g 80 -11.9 -3.39862 | ATTAAGCATGGATAA CAGTCAACTGC CTCT GCAGCTGACCG GTGAAGCGAAACAGG ydbH 1852435 - 1855074 + | hypothetical protein ynbE 1855071 - 1855256 + | hypothetical protein ydbL 1855261 - 1855590 + | hypothetical protein TERM 2305 1855769 - 1855717 - f 73 -9.5 -3.4404 | gap 2, opp_overlap 1855718 1855731, overlap 1855715 1855731 ATGCATAGTCAAATA TCTGTTTTAACTAATTGGCGTTGCA GTACA TGCAACGCCAATTAGTTAG--CGGA ATTTACGTCGATACT TERM 2306 1855718 - 1855770 + F 83 -10.8 -3.67296 | opp_overlap 1855717 1855715 1855731, overlap 1855731 TGCATAGTCAAATAT CTGTTTTAACTAATTGGCGTTGCA GTACA TGCAACGCCAATTAGTTAGCGGAA TTTACGTCGATACTC TERM 2307 1855757 - 1855731 - f 100 -15.3 -3.33815 | opp_overlap 1855718 1855731, overlap 1855717 1855715 ATCTGTTTTAACTAA TTGGCGTTGCA GTACA TGCAACGCCAA TTAGTTAGCGGAATT TERM 2308 1855731 - 1855757 + F 100 -15.3 -3.34192 | opp_overlap 1855731 1855717 1855715, overlap 1855718 ATCTGTTTTAACTAA TTGGCGTTGCA GTACA TGCAACGCCAA TTAGTTAGCGGAATT insA 1856042 - 1856317 + | IS1 ORF1 insB 1856344 - 1856739 + | IS1 ORF2 SF1821 1857234 - 1856872 - | hypothetical protein TERM 2309 1857218 - 1857233 + g 87 -4.6 -5.27769 | opp_overlap 1857186 CGTCGAGAGCTGTCC TGCGCG TTGC CCCGCA TTTTTACTTTTTTAT TERM 2310 1857723 - 1857759 + G 72 -5.2 -4.55887 | overlap 1857724 CTGACGCCATTTGTC CTGCATGTAGCGGC-ACG TAC CGTTGCCAC-ACATGCAC TTTCTATTTTTGGCG TERM 2311 1858407 - 1858395 - g 70 -6.9 -4.13903 | GACAGAACCAAAGAA CCCGG TGC CCAGG CAGAACCGCTCTATC TERM 2312 1859061 - 1859042 - g 70 -10 -3.16564 | gap 1 CTTCTATGTGATTAA CGC-GGCGA AAA TCGCCCGCG AATGTGGCCTGGCGG TERM 2313 1859091 - 1859104 + G 77 -3.1 -5.1287 | overlap 1859089 GCCCGTATTAATACC GTCAT GCAG ATGGC TTTTTTCCATCTGAC ydbK 1857411 - 1860935 + | putative oxidoreductase, Fe-S subunit TERM 2314 1860968 - 1860997 + F 87 -7.1 -5.10064 | opp_overlap 1860973, overlap 1860970 1860973 TATCCAATTCTAAAA AAAAAGCCCGGAC GACT GTTCGGGCTTGTC TTTTTATATGTTGGA TERM 2315 1860970 - 1860995 + F 83 -9.7 -4.16832 | opp_overlap 1860973, overlap 1860968 1860973 TCCAATTCTAAAAAA AAAGCCCGGAC GACT GTTCGGGCTTG TCTTTTTATATGTTG TERM 2316 1860992 - 1860973 - f 100 -9.2 -6.10489 | opp_overlap 1860970 1860968 1860973 AATTCTAAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG TERM 2317 1860973 - 1860992 + F 89 -11.4 -4.16226 | opp_overlap 1860973, overlap 1860970 1860968 AATTCTAAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG SF1823 1861302 - 1862198 + | putative outer membrane protein 1b (Ib;c) TERM 2318 1862440 - 1862458 + F 100 -10.2 -5.03945 | GTTCTAAATCCTCCT GCCCGCTG TTA TGGCGGGC TTTTTCTGCTTATTC ynaF 1862500 - 1863006 + | putative filament protein TERM 2319 1863033 - 1863014 - f 70 -10.7 -2.55351 | opp_overlap 1863014, overlap 1863013 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2320 1863014 - 1863033 + F 100 -10.7 -4.95957 | opp_overlap 1863014 1863013 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2321 1863252 - 1863242 - g 74 -2.4 -5.0809 | AACAAATTACAAAAA CGTC TGC GTCG TAACGTGGGCGAAGC TERM 2322 1863437 - 1863425 - g 84 -10.5 -3.71672 | CTCGATCAAAAGCAA CCGGG CTT CCCGG AACACGTTCTGCCCG ydaO 1863182 - 1864117 + | C32 tRNA thiolase TERM 2323 1864128 - 1864151 + T 87 -14.6 -2.80074 | opp_overlap 1864126 1864118, overlap 1864126 1864124 AATAACCAGGATAGC GCCCGATGCG CAAG CGTATCGGGC TACTCTTATGGAGGC dbpA 1865613 - 1864246 - | ATP-dependent RNA helicase DbpA TERM 2324 1864504 - 1864530 + g 70 -4.4 -4.52857 | opp_overlap 1864505, overlap 1864505 1864509 CGTCACAATGGAACT ATTAGCTGGCGG CGT TTGCCAGTTAAG TTTTATCTGCAACAT TERM 2325 1865901 - 1865882 - R 100 -10 -5.85178 | AACAGGCAAAAAAAA GCCGACTC ATCA AAGTCGGC GTCGTACGAATCAAT TERM 2326 1866038 - 1866055 + r 72 -2.7 -4.96848 | gap 1 AGAGTTTATTGACTT CGCT-CAA ACT TTGCGGCG TTTTTGTATACAGAC zntB 1867074 - 1866091 - | zinc transporter TERM 2327 1867698 - 1867727 + r 79 -2.9 -5.28176 | gap 1, opp_overlap 1867697, overlap 1867699 1867700 CGCTCGGCAAATTAT CAGCGCA-AAAAAC AAG GTTTTTATGCGCGC TTTTTTCTGACTAAC TERM 2328 1868097 - 1868058 - R 71 -3.4 -4.75372 | gap 1, overlap 1868060 ATTACTGAGCAAAAA CGGCTGGAGGAGCAGC-TG GAA CATGCTGCTCACCATGACG CGATGACCGGATTAC TERM 2329 1869041 - 1869016 - R 77 -10.4 -3.34227 | opp_overlap 1869033 TGAGGAAATTATCAA GCTGCAGCGT GTCGAT ACGCTGCGGC GCACGTTGGTTACGC SF1830 1870853 - 1869399 - | multidrug resistant protein TERM 2330 1870703 - 1870720 + g 74 -7.7 -4.01603 | opp_overlap 1870702 CAGCAATTAAATAGC TGGTCTG AAGC CAGGCCA TTTCGTCTTTACCTG TERM 2331 1870966 - 1870976 + H 77 -6.8 -4.53303 | opp_overlap 1870966 1870965 CAATTTTGGTGAAAT TGCC AGT GGCA TTTTCTATCGGAATC SF1831 1871358 - 1871546 + | hypothetical protein TERM 2332 1871808 - 1871798 - g 79 -4.6 -5.00616 | overlap 1871799 1871800 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 2333 1872343 - 1872329 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 2334 1872439 - 1872427 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG SF1832 1871556 - 1872755 + | IS1294 transposase SF1834 1874092 - 1874478 + | hypothetical protein TERM 2335 1874607 - 1874635 + F 100 -10.3 -5.9003 | CTGCTGTGTGTACTG TAGAGTCTGGCGG ATG TCGACAGGCTCTA TTTTTTTATTCATTT ogt 1875022 - 1875537 + | O-6-alkylguanine-DNA:cysteine-protein methyltransferase fnr 1875732 - 1876484 + | fumarate/nitrate reduction transcriptional regulator TERM 2336 1876506 - 1876554 + F 79 -12 -3.23638 | CGCATAACTCACTAT CCTTCTGTCATATCATTAAATT TTTCT GATTTATTGATCTGGCAGAAGG TTCATCACTGTTTCA ydaA 1876636 - 1877586 + | universal stress protein UspE TERM 2337 1877606 - 1877627 + T 100 -10.1 -5.30155 | opp_overlap 1877608, overlap 1877608 TCTTCAATAACTGAC AAGGCCCGA GTTA TCGGGCCTA TTTTTTACTTACTGC TERM 2338 1877608 - 1877625 + T 95 -12.7 -4.27681 | opp_overlap 1877608, overlap 1877606 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT TERM 2339 1877625 - 1877608 - T 88 -12.7 -3.47751 | opp_overlap 1877608 1877606 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT SF1838 1878932 - 1878093 - | IS911 ORF2 TERM 2340 1878501 - 1878512 + g 77 -5.8 -4.63218 | opp_overlap 1878497 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG SF1839 1879261 - 1878959 - | IS911 ORF1 TERM 2341 1880292 - 1880313 + G 70 -5.1 -4.43877 | overlap 1880293 ACGGTATGGGCTGAG TGGCTTGCT GCAC AGCAAGACG TTTATTTGAAGATTA SF1840 1879389 - 1880420 + | hypothetical protein TERM 2342 1880459 - 1880432 - T 83 -14.2 -2.74525 | overlap 1880429 1880448 CTAAATCAGACATCA CTGGCGTTATCC ACAA GGGTAACGCCAG TTCCCATCACATCAA SF1841 1882105 - 1880471 - | putative transport periplasmic protein TERM 2343 1881079 - 1881089 + g 70 -6.8 -4.09685 | opp_overlap 1881079 1881078 CATCTGGTATAAAAT GCCA CGC TGGC TTTTCGCCCGTCCCC TERM 2344 1881845 - 1881859 + g 86 -7.1 -4.95876 | TTGAGTCGCGACGCC GGGGA CAATC TCCCC TTTTTCGTTCTGATT SF1843 1882952 - 1883254 + | IS600 ORF1 SF1844 1883739 - 1883305 - | IS629 ORF2 SF1845 1884174 - 1883821 - | IS629 ORF2 TERM 2345 1883858 - 1883870 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF1846 1884500 - 1884174 - | IS629 ORF1 SF1847 1884585 - 1885403 + | IS600 ORF2 SF1848 1885415 - 1885801 + | putative excisionase TERM 2346 1886617 - 1886603 - T 79 -2.7 -5.31275 | CGGGATTAGAAAAAA CAGCC CTGAC GGCAG CATTCACCCGGACGG TERM 2347 1887009 - 1886983 - T 100 -11 -5.69379 | ATACAATTAAAAAAA GACCGAATAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT TERM 2348 1887150 - 1887140 - T 70 -2.4 -5.08088 | AATGGTCAATAAAAA GCGC GGT GCTC ATCAGCTTAAATGTT TERM 2349 1887200 - 1887171 - T 72 -5.1 -4.70879 | gap 2, opp_overlap 1887171 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA TERM 2350 1887171 - 1887200 + T 89 -5.1 -5.7946 | gap 2, opp_overlap 1887171 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA SF1850 1887578 - 1887237 - | hypothetical protein TERM 2351 1888444 - 1888434 - R 71 -6.8 -4.02132 | GGTGAAATGGATAAA TCGC AGC GCGA TCCAGGTAAACGCCA SF1852 1888841 - 1888467 - | hypothetical protein holE 1888980 - 1889210 + | DNA polymerase III subunit theta TERM 2352 1890031 - 1890017 - g 70 -7.1 -4.1399 | overlap 1890013 TTATCGATACAGAAA CCTGC GGTTT GCAGG GAGGGATCGTTGAGA SF1855 1889992 - 1890654 + | exodeoxyribonuclease X ptrB 1892711 - 1890651 - | protease 2 TERM 2353 1891945 - 1891929 - G 71 -2.2 -4.96501 | gap 1, opp_overlap 1891930, overlap 1891930 CGGCAGAAAAACAAA CGGCTCG GCAT CG-GCCA TTTCCGCGTCCAGCA TERM 2354 1892347 - 1892337 - G 75 -5.4 -4.67982 | opp_overlap 1892345 GCCCATCGAATAAAA CTCA CTA TGAG CTGCGCGCTTGTTGG yebE 1893580 - 1892921 - | hypothetical protein TERM 2355 1893327 - 1893339 + g 74 -3.3 -4.88684 | overlap 1893327 TGCGGTTCGTCCTGA TGCGC CGC GCGAA TTTTATCTTTGTATT yebF 1894263 - 1893907 - | hypothetical protein TERM 2356 1894090 - 1894102 + g 75 -4.7 -4.73613 | overlap 1894091 TTGATCATCTGCCCA GCGCG CCA CGCGA TTTTGTTGATAATCA TERM 2357 1894409 - 1894425 + H 73 -2.1 -5.18726 | opp_overlap 1894410 1894411, overlap 1894411 TTGCCGGTTTTCAGA ATGGTGC TCA GCACCTC TTTTTGTTCTGCCAG TERM 2358 1894411 - 1894423 + H 83 -9.1 -4.22377 | opp_overlap 1894410 1894411, overlap 1894409 GCCGGTTTTCAGAAT GGTGC TCA GCACC TCTTTTTGTTCTGCC purT 1894754 - 1895932 + | phosphoribosylglycinamide formyltransferase 2 TERM 2359 1895986 - 1895947 - T 79 -3.1 -5.41746 | gap 3, opp_overlap 1895958, overlap 1895958 AACCCGGCAAAAAAA CGCTACAAAAATGCCCGATC CTA GATCGGGCATTTT-G-A-CT TTTACAGCTTAGCGC TERM 2360 1895958 - 1895978 + T 100 -15.5 -4.4267 | opp_overlap 1895947 1895958 AAAACGCTACAAAAA TGCCCGATC CTA GATCGGGCA TTTTGACTTTTACAG TERM 2361 1895978 - 1895958 - T 100 -15.5 -4.90296 | opp_overlap 1895958, overlap 1895947 AAAACGCTACAAAAA TGCCCGATC CTA GATCGGGCA TTTTGACTTTTACAG eda 1896629 - 1895988 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2362 1896584 - 1896572 - G 71 -9.1 -3.44051 | opp_overlap 1896580 1896581, overlap 1896581 TTTTTACCACGATAA CCGGT ACA ACCGG GCCGGTGGTCAGGAT TERM 2363 1896690 - 1896707 + r 82 -7.7 -4.56597 | GATACAGGTTGCGCC CTGTTCG GCAC CGGACAG TTTTTCACGCAAGGC edd 1898477 - 1896666 - | phosphogluconate dehydratase TERM 2364 1898292 - 1898306 + g 71 -2.8 -4.7878 | overlap 1898298 ATTGTTACGCAACAT GCTTTT CAA AGAGGC TTTGTTTTCTGGCTG TERM 2365 1898298 - 1898310 + g 72 -6.3 -4.42386 | overlap 1898292 ACGCAACATGCTTTT CAAAG AGG CTTTG TTTTCTGGCTGGCAG TERM 2366 1898632 - 1898607 - H 100 -11.2 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGTG-GG TGAAT CCGCACGAGGC CTGAAAGTGTAAAAA TERM 2367 1900148 - 1900114 - H 86 -13.6 -3.22388 | overlap 1900118 CAGGGAAGGCAGCAA TTTACGACGCGCAAGG TCG CCTTTCGCGCCGAAAA TGACCAGGTCACAGG TERM 2368 1900144 - 1900118 - H 86 -14.4 -2.57721 | overlap 1900114 GAAGGCAGCAATTTA CGACGCGCAAGG TCG CCTTTCGCGCCG AAAATGACCAGGTCA TERM 2369 1900150 - 1900170 + H 70 -8.9 -3.46068 | opp_overlap 1900149 1900152, overlap 1900160 TTTCGCGCCGAAAAT GACCAGGTC ACA GGCCTGGGC TGTTTGCGTTACCGC TERM 2370 1900336 - 1900322 - H 71 -7 -4.15565 | overlap 1900323 GCGATTACGGGAAAA GCGCGC AAA GCGCGG CAAAACTGATAAAAA TERM 2371 1900335 - 1900323 - H 73 -10.5 -3.09018 | overlap 1900322 CGATTACGGGAAAAG CGCGC AAA GCGCG GCAAAACTGATAAAA TERM 2372 1900560 - 1900545 - g 81 -4.7 -5.02476 | overlap 1900534 ATATGCTGGAAAAAA TCCAG TCTCAG CTGGA ACATTTGAGCAAATC yebK 1900526 - 1901395 + | DNA-binding transcriptional regulator HexR TERM 2373 1901382 - 1901408 + F 77 -11.6 -2.87146 | opp_overlap 1901368 1901382 1901398 AGTTACTTAATTTAA GTGACGATCGCT AAA AGCGACTGTCAC TGTCCTAATCTTATA TERM 2374 1901408 - 1901382 - f 79 -11.6 -3.19371 | opp_overlap 1901382, overlap 1901368 1901398 AGTTACTTAATTTAA GTGACGATCGCT AAA AGCGACTGTCAC TGTCCTAATCTTATA TERM 2375 1901861 - 1901850 - g 95 -5.8 -5.38054 | GGCGACAAAGAAAAA GTCG GTAT CGAC TACAAAGGCCTGCCT pykA 1901523 - 1902965 + | pyruvate kinase TERM 2376 1902972 - 1903003 + T 93 -15.8 -2.92668 | opp_overlap 1902969 1902967 1902966, overlap 1902969 GTAGAGTAAGTACGT TGCCGGATGCGGCG AAAA CGCCACATCCGGCC TATAGTTCAATGATA TERM 2377 1903073 - 1903091 + T 100 -10.3 -5.68438 | TATCATCAGGCGAAG GCCTCTC CTCGC GAGAGGC TTTTTTATTTGATGG msbB 1904067 - 1903096 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2378 1903578 - 1903566 - G 79 -4.7 -4.9755 | opp_overlap 1903566 AGACATAATCAAAAA CCGGG TTG CCCTG ATTATGGAACATCGC TERM 2379 1904170 - 1904148 - R 100 -10.6 -5.99154 | CACCAAATAAAAAAA GCCGGTAC TGACTGC GTACCGGC TGCGAATGGATGTTA yebA 1905509 - 1904187 - | hypothetical protein TERM 2380 1904888 - 1904904 + g 81 -10.1 -3.87815 | opp_overlap 1904899, overlap 1904875 CTGCGCTCACTTCGG CGCTGGT TAA ACCGGCG TTTCTGGCGCTGGCA znuA 1906457 - 1905525 - | high-affinity zinc transporter periplasmic component TERM 2381 1905801 - 1905812 + g 72 -4.4 -4.59773 | ATGACCAAGCGGTGT CAGT CCGA ACTG TTTTTCGAAATAGCC TERM 2382 1906053 - 1906066 + g 77 -3.1 -5.03715 | overlap 1906042 1906051 GAAATCGCCGTGATG GTGAT CTTC GTCAC TTTTTTCCGCGTGGT TERM 2383 1906166 - 1906184 + g 75 -5.3 -4.65895 | TTACCTGCTTCGCTT CTGGTAA TTTGC TTACCGG TTTTTGCATAAACGC znuC 1906536 - 1907291 + | high-affinity zinc transporter ATPase znuB 1907311 - 1908072 + | high-affinity zinc transporter membrane component ruvB 1909229 - 1908219 - | Holliday junction DNA helicase B ruvA 1909849 - 1909238 - | Holliday junction DNA helicase motor protein TERM 2384 1909918 - 1909899 - H 93 -6.4 -5.67063 | overlap 1909900 TGTATGATAAAAAAA TGCTGGAT AGAT ATCCAGCG AAGGATGAAGAAAAC TERM 2385 1909917 - 1909900 - H 80 -9.9 -3.99153 | overlap 1909899 GTATGATAAAAAAAT GCTGGAT AGAT ATCCAGC GAAGGATGAAGAAAA TERM 2386 1910404 - 1910392 - g 85 -3.4 -5.35721 | ACAGAACAACAAAAA CAAC GAATT GTTG AACAGGTTCCCTCCC TERM 2387 1910718 - 1910693 - g 77 -10.4 -3.61178 | opp_overlap 1910709 CGGAGGGAGTTGAAA CGCCTCAGCC GGAACT GACCGAGGCG GTATAACTTAACGCA SF1872 1910122 - 1910724 + | hypothetical protein ruvC 1911247 - 1910726 - | Holliday junction resolvase TERM 2388 1910860 - 1910889 + g 86 -7.1 -5.02074 | opp_overlap 1910864 TAGCGGGCAGTTTCA GCAAGGTGCGG ACCATATG CTGCACCTGGC TTTTTTCGGCACTAC ntpA 1912534 - 1912052 - | dATP pyrophosphohydrolase aspS 1914394 - 1912622 - | aspartyl-tRNA synthetase TERM 2389 1915313 - 1915288 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 1915296, overlap 1915289 1915303 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 2390 1916293 - 1916321 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SF1878 1915150 - 1916346 + | ISSfl2 ORF SF1879 1917075 - 1917323 + | hypothetical protein TERM 2391 1917528 - 1917513 - f 72 -6.1 -4.26076 | GCAGTCTCAGCAAAA CACCG ACCAGA CGGTG AGAAGACAAAAAGAT ipaH_4 1917923 - 1919674 + | invasion plasmid antigen TERM 2392 1919739 - 1919716 - T 93 -10.2 -4.58395 | opp_overlap 1919728 1919729, overlap 1919718 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 2393 1919737 - 1919718 - T 100 -15 -3.90762 | opp_overlap 1919728 1919729, overlap 1919716 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT SF1881 1920477 - 1919854 - | putative tail component of prophage CP-933K SF1882 1921839 - 1920778 - | putative tail component encoded by cryptic prophage CP-933M TERM 2394 1921875 - 1921856 - R 100 -10 -4.85599 | gap 1, opp_overlap 1921856 TTCACCCCACAAAAA GCCCGCCTG AAC CAG-CGGGC TGTCATAACACTGTG SF1883 1922502 - 1921903 - | putative membrane protein precursor TERM 2395 1922550 - 1922533 - R 100 -11.3 -5.4505 | opp_overlap 1922531 1922549 TTCTGCAATAAAAAA GGCACCA TTTC TGGTGCC CGTATCTGGGTTATA SF1884 1926049 - 1922570 - | host specificity protein TERM 2396 1923386 - 1923415 + g 70 -6.5 -4.18367 | CACAGCCCACATGCT GTTCAGGTTATTA TTTG TATCAACCTGAAC TTTCTGTATCTGCTG TERM 2397 1924288 - 1924313 + g 72 -9.7 -3.30441 | GCACATGCTGCACGG CGGTGATGGCA TACG TGCCGTCGTCG TTCTCACGGATACTC TERM 2398 1925899 - 1925919 + g 71 -3.1 -4.7497 | CGCTATCCAGGACCG GCGTACCGT TCA GCAGCACGC TTTTTAATCCATCCA TERM 2399 1926093 - 1926070 - R 70 -9.6 -3.01125 | opp_overlap 1926075 1926088, overlap 1926075 ACGCTCCATAAACGA CAAAACCGCC CGCA GGCGGTTTCA CATGAAACATTTTGC TERM 2400 1926075 - 1926088 + r 75 -9.5 -3.60098 | opp_overlap 1926070 1926075 CCATAAACGACAAAA CCGCC CGCA GGCGG TTTCACATGAAACAT TERM 2401 1926088 - 1926075 - R 93 -9.5 -4.64846 | opp_overlap 1926075, overlap 1926070 CCATAAACGACAAAA CCGCC CGCA GGCGG TTTCACATGAAACAT SF1885 1926652 - 1926110 - | putative tail component SF1886 1927248 - 1926649 - | putative tail assembly protein TERM 2402 1926887 - 1926857 - G 74 -6 -4.45945 | overlap 1926862 1926864 ACCGATGAACCAAAA CAGCACAGCAGCAC ATC GCCCGGTTGTGCTG ATGACAACGGCACCT TERM 2403 1927261 - 1927276 + r 70 -10.4 -2.5474 | overlap 1927260 1927258 CATCCGGAACCGTTC CTCCGG CTCA CCGGAG ATATTCTCGCTGGGA TERM 2404 1927366 - 1927382 + r 70 -9.5 -3.03214 | opp_overlap 1927336, overlap 1927368 TCGCCGGGCGTGCGC CAGAATC GCT GATTCTG TCTGTGTCATGGATT SF1887 1928095 - 1927397 - | minor tail protein TERM 2405 1927784 - 1927764 - G 90 -9.7 -4.42653 | overlap 1927766 ACCGCATCCAGAAAA CGGGCGTAA ACC TTACGCCGG ACCACCGTTCCGCCG TERM 2406 1927946 - 1927960 + g 80 -5.7 -4.94972 | CTGCCGCCCCTGCCA GGTGA CCGGC TCACC TTTTTCGTTCTGCTC SF1888 1928424 - 1928095 - | putative minor tail protein TERM 2407 1928229 - 1928198 - G 100 -15.2 -3.35798 | overlap 1928216 AGTTTCCAGTCATAA GGTGGCGTCCAC TGAAATGC GCGGACGCCACC GTGCCGTTCCAGAAA SF1889 1931465 - 1928424 - | putative tail length tape measure protein precursor TERM 2408 1929048 - 1929074 + gr 76 -5 -4.78077 | TTTCCAGTCGCCCTG CGCCACTTCCAG TTC CTGCCAGTAGCG TTTGTTTTCATTCAG TERM 2409 1929628 - 1929645 + gr 77 -2.7 -5.14163 | gap 1, overlap 1929629 1929631 CGGGTGGCCTCATCA T-TACGGG TTG CCCGTGTA TTTTTCTTAATGGCT TERM 2410 1929629 - 1929643 + gr 76 -7.8 -4.19587 | overlap 1929628 1929631 GGGTGGCCTCATCAT TACGGG TTG CCCGTG TATTTTTCTTAATGG TERM 2411 1929631 - 1929641 + gr 72 -8.2 -3.67974 | overlap 1929629 1929628 GTGGCCTCATCATTA CGGG TTG CCCG TGTATTTTTCTTAAT TERM 2412 1930490 - 1930509 + gr 95 -13.6 -3.32997 | opp_overlap 1930486, overlap 1930486 CACCGGCATAATGTC CCGTCAGC GCCA GCTGACGG TTAAATTTCTCGCCC TERM 2413 1931127 - 1931097 - GR 75 -6.1 -4.37658 | gap 1, opp_overlap 1931098, overlap 1931098 AATCTGGCGATAAAA GGCGGCAGCCGC TTTATCCT GCGCCT-CCGCC AGTGCCCTGGCCTGC TERM 2414 1931098 - 1931108 + gr 74 -8.2 -3.96624 | opp_overlap 1931097 1931098 ATCTGGCGATAAAAG GCGG CAG CCGC TTTATCCTGCGCCTC TERM 2415 1931140 - 1931158 + gr 70 -4.4 -4.5442 | overlap 1931134 GCCAGTGCCCTGGCC TGCGCCTG TTC CTCGCGCA TTTTCTGATTCAGGG SF1890 1931712 - 1931437 - | putative tail component of prophage CP-933K TERM 2416 1931563 - 1931550 - GR 76 -8.1 -4.07568 | overlap 1931561 TCTCTTCCGGTAAAA GGCTG AAAT CAGCC ACCGCAGCATCGCTG SF1891 1932161 - 1931775 - | putative tail component of prophage CP-933K TERM 2417 1932200 - 1932183 - R 100 -14.1 -4.65895 | CTCCGGATGCAAAAA GCCCCGG ATAA CCGGGGC AATGATGAGTATCGT SF1892 1932960 - 1932220 - | putative tail component of prophage CP-933K SF1893 1933372 - 1932971 - | putative tail component of prophage CP-933K TERM 2418 1933318 - 1933301 - G 74 -3.3 -5.01732 | overlap 1933302 AAGCCCGTCAAAAAA CGTGGCG CTGT CTCCACA CTGTTCCCGAAGGCG SF1894 1933959 - 1933369 - | putative tail component of prophage CP-933K TERM 2419 1933840 - 1933876 + g 72 -8 -3.86897 | gap 1 ATTCCCGGCAACCTG CCGGGTGGCAACCGAGA CCGC TTTCTGT-GCCACACGG TTTATCGCCCATGCG SF1895 1934317 - 1933946 - | putative tail attachment protein SF1896 1934730 - 1934329 - | putative DNA-packaging protein TERM 2420 1935157 - 1935132 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 1935140, overlap 1935133 1935147 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 2421 1936137 - 1936165 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SF1897 1934994 - 1936190 + | ISSfl2 ORF TERM 2422 1936275 - 1936251 - T 100 -7.9 -5.64421 | ATCGGAAAGAAAAAA GGCCATCAG CAAAACT CTGATGACC TGAATCACCTTTACC TERM 2423 1936455 - 1936478 + T 72 -6.6 -4.2711 | overlap 1936456 GGTCCTTTTTTCTAC GGTCCTCCTC CCCG GAGGGGGGCA TTTCATTATTTTTCT TERM 2424 1936456 - 1936477 + T 71 -10.1 -3.13826 | overlap 1936455 GTCCTTTTTTCTACG GTCCTCCTC CCCG GAGGGGGGC ATTTCATTATTTTTC TERM 2425 1936629 - 1936614 - T 77 -3.9 -5.24129 | GCGCTGTACAAAAAA CCGCC AGCCAA GGCAG TTAAGAGTGTGTTCC TERM 2426 1937305 - 1937295 - T 100 -8.2 -5.64274 | opp_overlap 1937295 1937298 TCAGGCATAAAAAAA CCGC TCG GCGG CGGGTTTTGCTTACT SF1898 1938065 - 1937376 - | putative Q antiterminator encoded by prophage CP-933P TERM 2427 1937901 - 1937926 + g 100 -8.3 -5.42862 | gap 1 CCGCGTTATCATTTT TCCGGTCACCTC ATC GCGGT-ACCGGA TTTTTTTACGCCTGT SF1899 1938421 - 1938062 - | putative crossover junction endodeoxyribonuclease SF1900 1938625 - 1938927 + | IS600 ORF1 SF1901 1938963 - 1939781 + | IS600 ORF2 insB 1940671 - 1940294 - | IS1 ORF2 insA 1940943 - 1940716 - | IS1 ORF1 SF1904 1941077 - 1941904 + | putative serine protease SF1905 1941948 - 1942697 + | hypothetical protein SF1906 1942694 - 1943263 + | hypothetical protein SF1907 1944799 - 1943960 - | IS911 ORF2 TERM 2428 1944368 - 1944379 + g 77 -5.8 -4.63218 | opp_overlap 1944364 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 2429 1944720 - 1944740 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF1908 1945164 - 1944826 - | IS911 ORF1 TERM 2430 1945574 - 1945550 - H 73 -10 -3.31915 | opp_overlap 1945549 1945550, overlap 1945548 1945547 TGGTTACAAAAATTA GCGCAGTGGC ATCAG ACCACTACGC CTTATCTTTTTTTAC yecN 1945761 - 1946156 + | hypothetical protein yecO 1946197 - 1946940 + | hypothetical protein yecP 1946937 - 1947908 + | putative enzyme TERM 2431 1948043 - 1948064 + T 77 -11.5 -3.28745 | opp_overlap 1948041 1948040, overlap 1948045 ACGTTTGCATAACCT CAGCGCCCG TTTC CGGGCGCTA TTCACTTCTTACGCC TERM 2432 1948045 - 1948062 + T 86 -14.1 -3.20751 | opp_overlap 1948041 1948040, overlap 1948043 GTTTGCATAACCTCA GCGCCCG TTTC CGGGCGC TATTCACTTCTTACG bisZ 1950502 - 1948073 - | biotin sulfoxide reductase 2 TERM 2433 1949766 - 1949779 + g 74 -2.3 -5.06451 | opp_overlap 1949758 1949767, overlap 1949758 1949767 GGATCAATGGCAATC ACTGG TTTG CCAGA TTTTTTCAGCTGATG TERM 2434 1950454 - 1950470 + g 71 -9.4 -3.48105 | overlap 1950453 TCACCACCAGCGCTC CAGCGG CAATA CCGCTG TGTTTAATAAATTCA yecK 1951627 - 1950527 - | putative cytochrome C-type protein TERM 2435 1951967 - 1951943 - R 100 -10 -5.64274 | TCAGGGATAAAAAAA GGCCCCTG TTGAAATTG CAGGGGCC TGGTACGAGCAAGCA cutC 1952455 - 1952015 - | copper homeostasis protein yecM 1953341 - 1952775 - | hypothetical protein TERM 2436 1953172 - 1953192 + g 72 -6.7 -4.25104 | opp_overlap 1953146 1953166 TGTTCAAAACCGCGA CGCCAGCGC TCA GCGGTGACG TTTTGATGGCAACGC TERM 2437 1953516 - 1953534 + H 77 -11 -3.20382 | ATTTCTTTAACTGGT GCGGGCAA TTT TTGCTCGC TTCATCAATGTAAGG TERM 2438 1954877 - 1954867 - g 70 -4.6 -4.57569 | overlap 1954849 GGATCTCTCCAAAAA CCGC ACC ACGG ACTACATCTTCGACT argS 1953557 - 1955290 + | arginyl-tRNA synthetase TERM 2439 1955312 - 1955337 + F 100 -9.8 -5.46657 | gap 1, opp_overlap 1955312 TTTCGTGAGAGTGAA GCCTGATCAGG GTTAG CC-GATCAGGC TTTTTTATTGCCATC TERM 2440 1955337 - 1955312 - f 77 -11.2 -3.12351 | opp_overlap 1955312 TTTCGTGAGAGTGAA GCCTGATCAG GGTTAG CCGATCAGGC TTTTTTATTGCCATC yecT 1955467 - 1955955 + | hypothetical protein SF1919 1956609 - 1956175 - | IS629 ORF2 SF1920 1957047 - 1956691 - | IS629 ORF2 TERM 2441 1956728 - 1956740 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF1921 1957370 - 1957044 - | IS629 ORF1 flhE 1957760 - 1957422 - | flagellar protein flhB 1960977 - 1959784 - | flagellar biosynthesis protein FlhB TERM 2442 1959881 - 1959861 - G 72 -4.6 -4.63218 | TTCTCGTTAATAAAA TCCAGGGC TGCCG GCACCGGA AGATGAGTAGGTGTA TERM 2443 1960308 - 1960324 + g 84 -7.9 -4.62783 | CATCACGAATATCCT GCCGCGA CAT TCGCAGC TTTTTCAGGTGGCTG TERM 2444 1960894 - 1960920 + g 71 -2.2 -4.9218 | overlap 1960895 GGTCAGTTCACGGGA ACGCGGGA TTTGCCCCTCT TCCCGCGC TTTTTCTAGTCGGTG SF1925 1962445 - 1961606 - | IS911 ORF2 TERM 2445 1962014 - 1962025 + g 77 -5.8 -4.63218 | opp_overlap 1962010 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 2446 1962366 - 1962386 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF1926 1962810 - 1962472 - | IS911 ORF1 TERM 2447 1962993 - 1963018 + G 76 -12.7 -2.51547 | opp_overlap 1962993, overlap 1962992 1962990 1963013 1963014 GATGAGCATAAGAAA GCCAGAGTATT ACTT GATACTCTGGC CTGTTCCTGTCCGGC TERM 2448 1963018 - 1962993 - g 95 -12 -4.36554 | opp_overlap 1962993 1962992 1962990 1963013 1963014 GATGAGCATAAGAAA GCCAGAGTAT TACTTG ATACTCTGGC CTGTTCCTGTCCGGC TERM 2449 1963023 - 1963038 + G 70 -4.7 -4.57569 | overlap 1963014 1963013 GATACTCTGGCCTGT TCCTG TCCGGC CAGGA TTTTTGGCGGGATGG SF1927 1962915 - 1963310 + | hypothetical protein SF1928 1963700 - 1964518 + | IS600 ORF2 SF1929 1964530 - 1964934 + | hypothetical protein cheZ 1965666 - 1965022 - | chemotaxis regulator CheZ cheY 1966066 - 1965677 - | chemotaxis regulatory protein CheY cheB 1967130 - 1966081 - | chemotaxis-specific methylesterase cheR 1967993 - 1967133 - | chemotaxis methyltransferase CheR tap 1969613 - 1968012 - | methyl-accepting protein IV TERM 2450 1968615 - 1968630 + g 74 -2.4 -5.055 | overlap 1968609 1968612 1968616 AACACCGCCCGCCTG CGCCGT TGTC GCGGCA TTTTTTGCCAGTTCC TERM 2451 1969224 - 1969243 + g 74 -6.4 -4.46757 | overlap 1969234 CTGATGTTCGAGATC GTTGTGCC AGCG GGCAAAAC TTTTCTCCGTCTCTT tar 1971320 - 1969659 - | methyl-accepting chemotaxis protein II, aspartate sensor receptor TERM 2452 1970565 - 1970542 - G 73 -9.6 -3.64822 | ACGGTGTCAGTCAAA GAGCGTTGCA TATG TGAAACGCTC TGCGCCAGGTCACCC TERM 2453 1971436 - 1971416 - R 100 -8.3 -5.67283 | opp_overlap 1971416 1971412 AATTGAAATAAAAAA CCCGATG CGCAGAT CATCGGG TTCATTTCAATTGAG cheW 1971968 - 1971465 - | purine-binding chemotaxis protein TERM 2454 1971511 - 1971521 + g 71 -3.2 -4.74706 | opp_overlap 1971495 AGCGCCATCTCTTCG CTGT TCA GCAG TTTTTCGATGTTCAC cheA 1973953 - 1971989 - | chemotaxis protein CheA TERM 2455 1972178 - 1972194 + g 72 -7.9 -3.89346 | opp_overlap 1972175 1972176 ATCCACCAGCAAGGC GTAGCGG CGA CCGCCAC TTTGTAAGATCACCA TERM 2456 1973544 - 1973566 + g 76 -11.2 -3.41527 | overlap 1973550 CTTAATCGGGTCACT GCGGATGGCG TTT CGCCTTTCGC TTCTAATGCCAGTTG TERM 2457 1973550 - 1973560 + g 72 -8.2 -3.82083 | overlap 1973544 CGGGTCACTGCGGAT GGCG TTT CGCC TTTCGCTTCTAATGC motB 1974884 - 1973958 - | flagellar motor protein MotB TERM 2458 1973996 - 1974014 + g 93 -8.8 -4.83169 | TTGTGGGAACACTGA CCTGTGGT GCA ACCTCAGG TTTTTCTAGGGCGCT motA 1975768 - 1974881 - | flagellar motor protein MotA TERM 2459 1975584 - 1975603 + g 72 -8.6 -3.82097 | gap 1, opp_overlap 1975583 1975584 CGACGAAACAGCAAC GGCAGCGCT TTC AGCG-TGCC TTTAATCGCTTTGCC TERM 2460 1975868 - 1975845 - R 100 -12.5 -6.06723 | TTGGGGAAAAAAAAA GCAGCGGTA CGTCGT TACCGCTGC TGGAATGTTGCGCCA flhC 1976473 - 1975895 - | transcriptional activator FlhC insA 1976736 - 1977011 + | IS1 ORF1 insB 1977038 - 1977433 + | IS1 ORF2 otsB 1978671 - 1977871 - | trehalose-6-phosphate phosphatase TERM 2461 1978105 - 1978092 - G 71 -9.5 -3.5241 | overlap 1978079 1978090 CATCGCCCAGAAATA CGGGC GTTC GCCCG ATAAAAGGAGCTTCC TERM 2462 1978799 - 1978774 - R 93 -12.6 -3.81414 | opp_overlap 1978776 ATTTGCAACGAAGAA CAGCCAACCG TTGTGG CGGCTGGCTG TGGTGGGAAAAAACG araH 1979827 - 1978838 - | L-arabinose transporter permease protein araG 1981353 - 1979839 - | L-arabinose transporter ATP-binding protein TERM 2463 1981383 - 1981409 + H 93 -10.8 -4.57341 | overlap 1981384 1981385 TCACTGGTCGTTCAC ACCCCCTCTGCA TCA TGCAGAGGGGAA TTTTTCCGGCAAATT TERM 2464 1981384 - 1981408 + H 93 -14.3 -3.33922 | overlap 1981383 1981385 CACTGGTCGTTCACA CCCCCTCTGCA TCA TGCAGAGGGGA ATTTTTCCGGCAAAT TERM 2465 1981385 - 1981407 + H 100 -17.8 -2.60032 | overlap 1981384 1981383 ACTGGTCGTTCACAC CCCCTCTGCA TCA TGCAGAGGGG AATTTTTCCGGCAAA TERM 2466 1982466 - 1982454 - H 78 -6.3 -4.62069 | opp_overlap 1982454 TGTGTAGGGCAAAAA CGAAT GAC ATTCG TTAAATTAATCGGAA TERM 2467 1983610 - 1983587 - g 70 -5.2 -4.41633 | GATCTGGAAAAAGAA CAGCAGCATG ATGG CCTGTTGCTG CAAACCATTCTTGAT yecI 1983209 - 1983712 + | ferritin-like protein TERM 2468 1983715 - 1983747 + F 78 -6.2 -4.56597 | opp_overlap 1983718 1983720, overlap 1983716 CCAGCTGCATTGATC ATACATCGGCGCTA ATACA TTGCGCCGATGAAG TTTTTGAGAAACCGC TERM 2469 1983716 - 1983746 + F 73 -9.7 -3.33744 | opp_overlap 1983718 1983720, overlap 1983715 CAGCTGCATTGATCA TACATCGGCGCTA ATACA TTGCGCCGATGAA GTTTTTGAGAAACCG TERM 2470 1983744 - 1983718 - f 79 -12.3 -2.80816 | opp_overlap 1983716 1983715, overlap 1983720 GCTGCATTGATCATA CATCGGCGCTA ATACA TTGCGCCGATG AAGTTTTTGAGAAAC TERM 2471 1983786 - 1983759 - f 95 -13.5 -3.86822 | opp_overlap 1983759 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTGTT TGAAGCAGCGG TTTTTTTAATGGGAT TERM 2472 1983759 - 1983786 + F 100 -11.3 -5.52986 | opp_overlap 1983759 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTGTT TGAAGCAGCGG TTTTTTTAATGGGAT TERM 2473 1984130 - 1984157 + F 73 -10 -3.30007 | opp_overlap 1984129 1984137, overlap 1984137 CCGTCATCAGGACAC AAAAAAACCTGC CGGA GCAGGTTTTTTG TTATCGGAACATATT TERM 2474 1984137 - 1984150 + F 100 -8.1 -5.55769 | opp_overlap 1984137 1984129, overlap 1984130 CAGGACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 2475 1984150 - 1984137 - f 100 -8.1 -5.74122 | opp_overlap 1984130 1984137, overlap 1984129 CAGGACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 2476 1984424 - 1984436 + F 72 -9.1 -3.64488 | opp_overlap 1984424 1984423 1984421 1984411, overlap 1984423 GATGGCAAGAAATAG CGCCT GCC AGGCG TCTTTTCCGGCCATT SF1950 1984507 - 1984830 + | hypothetical protein TERM 2477 1984867 - 1984834 - f 73 -9.7 -3.34398 | opp_overlap 1984843, overlap 1984832 1984835 GTCTTTCTCTAAATA TTTTAATCAGCGAGG GGAT CTTCGCTGATTAAAG AAATAGCGGTAATGC TERM 2478 1984866 - 1984835 - f 81 -13.2 -2.60496 | opp_overlap 1984843, overlap 1984834 1984832 TCTTTCTCTAAATAT TTTAATCAGCGAGG GGAT CTTCGCTGATTAAA GAAATAGCGGTAATG ftn 1985001 - 1985498 + | ferritin TERM 2479 1985506 - 1985527 + T 100 -17.3 -3.61178 | opp_overlap 1985495, overlap 1985505 AAAACTAATGCTCTC CGGCGGCAG GTTT CTGCCGCCG TTTCAAATCAGTGAC yecH 1985774 - 1985535 - | hypothetical protein TERM 2480 1985585 - 1985572 - G 77 -6.7 -4.57569 | opp_overlap 1985570 TGATCGGTCGAAAAA CCTTC TTCT GAAGG TATAAATTTGCCTTT TERM 2481 1986925 - 1986935 + G 72 -8.2 -3.7229 | overlap 1986923 CAATTACCTTTCTGC CGCC GTT GGCG TTTGCACTGTTTTAT tyrP 1985964 - 1987175 + | tyrosine-specific transport protein yecA 1987902 - 1987237 - | hypothetical protein TERM 2482 1987956 - 1987968 + r 78 -6.3 -4.69027 | CTTACATGCCGGTCC GTATC AGA GATAC TTTTTGAGTGGCTTT TERM 2483 1988051 - 1988038 - R 100 -8.1 -5.64274 | opp_overlap 1988038 GCAGGCACAAAAAAA CCACC CGAA GGTGG TTTCACGACACTGCT TERM 2484 1988139 - 1988159 + r 72 -10.5 -2.89742 | overlap 1988142 GCACAGCGCGAACGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2485 1988294 - 1988316 + r 73 -7.7 -4.13767 | CAGGCCTTTCAGCCA GACATCCGC TTGAC GCCGATGTC TTTTAAACTGGAGCG TERM 2486 1988358 - 1988374 + r 73 -10.9 -2.62616 | opp_overlap 1988337 TCGAACTCGAGACCT CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 1989100 - 1988552 - | phosphatidylglycerophosphate synthetase uvrC 1990989 - 1989157 - | excinuclease ABC subunit C uvrY 1991642 - 1990986 - | response regulator TERM 2487 1991892 - 1991881 - H 73 -4.4 -4.80167 | CAGCAAAAATGAAAA TCAG CCCG CTGA ATATGTAACATTAAT TERM 2488 1992253 - 1992242 - g 81 -5.8 -4.77986 | TTAAAGATGGAAAAA CAGC TTGC GCTG ATCGAAGACGAAACC yecF 1992101 - 1992325 + | hypothetical protein TERM 2489 1992359 - 1992333 - T 100 -12.3 -4.70583 | opp_overlap 1992333 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTATTGACAAAATCA TERM 2490 1992333 - 1992359 + T 95 -14.5 -3.62046 | opp_overlap 1992333 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTATTGACAAAATCA sdiA 1992978 - 1992352 - | transcriptional regulator of ftsQAZ gene cluster TERM 2491 1993167 - 1993197 + r 89 -5.3 -5.70522 | gap 1, opp_overlap 1993162 1993161, overlap 1993168 1993170 CGCTTGAAATGGCGT CCCGCCCCGACAGG TGAA TC-GTCGGGGCTGA TTTTTTCTTATTATT TERM 2492 1993168 - 1993196 + r 77 -8.8 -3.98653 | gap 1, opp_overlap 1993162 1993161, overlap 1993167 1993170 GCTTGAAATGGCGTC CCGCCCCGACAGG TGAA TC-GTCGGGGCTG ATTTTTTCTTATTAT TERM 2493 1993170 - 1993194 + r 75 -10 -3.54636 | gap 1, opp_overlap 1993162 1993161, overlap 1993168 1993167 TTGAAATGGCGTCCC GCCCCGACAGG TGAA TC-GTCGGGGC TGATTTTTTCTTATT yecC 1993960 - 1993208 - | putative amino-acid ABC transporter ATP-binding protein YecC yecS 1994625 - 1993957 - | putative transport system permease protein (former yecC) TERM 2494 1994182 - 1994170 - G 72 -7.7 -3.95787 | TACCAGACTGATAAA GCTGT TCG ACAGC GGCGGCAACGCCACC TERM 2495 1994474 - 1994459 - G 81 -4.6 -5.08178 | overlap 1994460 ATAGAGATATAAAAA CGCGCC AGCC AGCGCA CGGGCCAGATTGGCG yedO 1995626 - 1994640 - | D-cysteine desulfhydrase TERM 2496 1995692 - 1995711 + r 84 -4.9 -5.39755 | opp_overlap 1995693, overlap 1995693 ACGCGTAAATAAAAA AGGCGCT AGTGAA AGCGCCC TTTTTTGTCATTATG TERM 2497 1995710 - 1995693 - R 100 -8.4 -5.63517 | opp_overlap 1995692 1995693 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT TERM 2498 1995693 - 1995710 + r 72 -8.4 -3.82226 | opp_overlap 1995693, overlap 1995692 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT SF1963 1996588 - 1995731 - | cystine transporter subunit TERM 2499 1995895 - 1995909 + g 84 -7.8 -4.63486 | CTTCACCGGTTACTG CCAGCG TAT CGTTGG TTTTCTTCACCAGAT TERM 2500 1996055 - 1996078 + g 79 -2.3 -5.22039 | CAGCCACTCTTCATA GTTGGTGCC CAGACC GACACCCAC TTTTTTGCCTTTCAG fliZ 1997206 - 1996619 - | protein FliZ TERM 2501 1997892 - 1997880 - R 72 -9.1 -3.49653 | opp_overlap 1997879 1997878 ACCAGCGGGACATAA CGCTG CCA CAGCG AGTGTTTATCCATTA TERM 2502 1998079 - 1998063 - R 100 -15.1 -5.15969 | opp_overlap 1998063 GCCGAATGTAAAAAA CCCCGCC GGT GGCGGGG TTTGAGAGGCATTCA TERM 2503 1998063 - 1998079 + r 100 -15.1 -3.54459 | opp_overlap 1998063 GCCGAATGTAAAAAA CCCCGCC GGT GGCGGGG TTTGAGAGGCATTCA fliC 1999752 - 1998100 - | flagellin fliD 2000018 - 2001424 + | flagellar capping protein fliS 2001449 - 2001859 + | flagellar protein FliS fliT 2001859 - 2002224 + | flagellar biosynthesis protein FliT amyA 2002302 - 2003789 + | cytoplasmic alpha-amylase TERM 2504 2003815 - 2003795 - T 71 -10.4 -2.66272 | opp_overlap 2003794, overlap 2003792 GGTGATTTAAATCCA TCCCCGAC GGCAA GCCGGGGA GATTTCATTACGGCA TERM 2505 2003834 - 2003849 + T 74 -8.2 -3.85698 | TTCATTACGGCAGTG GCGTCG GTAA CGGCGC TTTATCCAGCGCGGC yedD 2004236 - 2003823 - | hypothetical protein yedE 2004423 - 2005628 + | putative inner membrane protein yedF 2005625 - 2005858 + | hypothetical protein TERM 2506 2005864 - 2005892 + T 77 -11.7 -2.77182 | opp_overlap 2005859 2005855 2005848, overlap 2005861 TCAGAAGTAATCCCT CATTCCCGCTGTG GCC CACAGCGGGAACA TCGTTACCTCTGACA TERM 2507 2006652 - 2006602 - T 82 -7.6 -4.66833 | gap 1, overlap 2006603 GGGTAATGTCAAAAA CCAGGGCGCGGAGTTAATTCAAC CTGTTT GTTGACATC-CTCCACGCCCTGA ATGACGAGGACCCCT TERM 2508 2006651 - 2006603 - T 70 -8.9 -3.39618 | gap 1, overlap 2006602 GGTAATGTCAAAAAC CAGGGCGCGGAGTTAATTCAAC CTGTTT GTTGACATC-CTCCACGCCCTG AATGACGAGGACCCC TERM 2509 2006674 - 2006691 + T 70 -9.9 -2.94888 | overlap 2006672 2006687 AGGACCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT SF1975 2007481 - 2006675 - | putative virulence protein TERM 2510 2007250 - 2007263 + g 73 -3.8 -4.83615 | overlap 2007237 2007235 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG TERM 2511 2007538 - 2007569 + H 78 -6.6 -4.65895 | gap 1 CGAGCTTAACGCCCT GCGGATAGCGGAATG CAT CATTCTGTCA-CCGC TTTTTGAATCAGGGG SF1976 2007861 - 2008175 + | hypothetical protein TERM 2512 2008673 - 2008657 - f 77 -3.8 -5.25976 | AATTAAAAAAATAAA TTATGA GTCAA TCATAA ATAACAACCTTTAAT nmpC 2008894 - 2009976 + | putative outer membrane porin protein C precurser TERM 2513 2010026 - 2009991 - T 100 -14.2 -3.68529 | gap 1, overlap 2009993 ATCTGATTACTCAAA GATATGTTGTGGGAGGC TTT GCCTCCC-CAACATATA AGTGGCGCTCTCAAG TERM 2514 2010024 - 2009993 - T 100 -16.8 -3.42395 | gap 1, overlap 2009991 CTGATTACTCAAAGA TATGTTGTGGGAGGC TTT GCCTCCC-CAACATA TAAGTGGCGCTCTCA TERM 2515 2010099 - 2010118 + T 84 -7.8 -4.78107 | TTACCCTTTATTTTC TGGGACGT TTCA ACGCCCCA TTTTTAATAATACTC SF1978 2011263 - 2010526 - | putative regulator ybcL 2011824 - 2011273 - | putative kinase inhibitor emrE 2012325 - 2011993 - | multidrug efflux protein fliE 2012984 - 2012670 - | flagellar hook-basal body protein FliE TERM 2516 2012796 - 2012810 + g 93 -8.6 -4.88067 | TAGCGCCACGCCGGG TTCACC GAG GGTGAA TTTTTCTGCCTGCGT TERM 2517 2014209 - 2014193 - H 72 -5.7 -4.40882 | overlap 2014194 GACAAATCAAAATAA CCGCCAG CAG CAGGCGA GCACCACCAGCAATA TERM 2518 2014496 - 2014511 + H 76 -8.2 -4.07568 | opp_overlap 2014495 2014483 2014496 TAGCAGTGACGAAAG CGGCGG AGCA CTGCCG TTTTGGCAACAGCAA fliG 2014850 - 2015845 + | flagellar motor switch protein G fliH 2015838 - 2016524 + | flagellar assembly protein H TERM 2519 2016726 - 2016754 + G 70 -3.8 -4.72986 | overlap 2016728 ACGAAGTAGAAAGCG AAGTCGTTGGCT TTAAC GGTCAACGGCTG TTTTTAATGCCGCTG TERM 2520 2016857 - 2016840 - g 82 -11.3 -3.56099 | opp_overlap 2016853 2016855 CAGAAGGGCTGCAAA GCGGCAA GCAG TTGCCGC TCGGTCCGGCGTTAT TERM 2521 2017119 - 2017143 + G 74 -8.5 -3.95584 | TGATGGCACGCTACA CCCGCGCCGAT GTC ATTGTCGTGGG TTTGATTGGTGAACG TERM 2522 2017464 - 2017436 - g 74 -10.4 -3.53012 | opp_overlap 2017442 TCGGTGTTTGCCAAA TTACCGGCAC TGGTCGAGC GTGCCGGTAA TGGCATTAGCGGCGG fliI 2016524 - 2017897 + | flagellum-specific ATP synthase fliJ 2017916 - 2018260 + | flagellar protein TERM 2523 2019048 - 2019029 - g 76 -7.9 -4.16842 | GCCAGGGGCAACAAA GTGCAGA GTTGCG TCTGCAC CCACAGGATTTAGGT fliK 2018257 - 2019384 + | flagellar hook-length control protein fliL 2019489 - 2019953 + | flagellar basal body-associated protein FliL fliM 2019958 - 2020962 + | flagellar motor switch protein FliM TERM 2524 2021068 - 2021056 - g 74 -2.6 -5.12617 | opp_overlap 2021059, overlap 2021045 CAACCAGCGAAAAAA GCGC TGCCG ACGC GGTGTTCCAGCAATT fliN 2020959 - 2021372 + | flagellar motor switch protein FliN fliO 2021375 - 2021740 + | flagellar biosynthesis protein FliO TERM 2525 2022139 - 2022127 - g 70 -4.7 -4.57073 | opp_overlap 2022131, overlap 2022129 GAGGCGCTGGAAAAA GGGGC GCA GCCGC TGCGTGAGTTTATGC fliP 2021740 - 2022477 + | flagellar biosynthesis protein FliP fliQ 2022487 - 2022756 + | flagellar biosynthesis protein FliQ TERM 2526 2023451 - 2023477 + G 72 -4.4 -4.58685 | overlap 2023433 2023453 CGGCATCTCTTTAAT GGCGGCATTAAT GCC GTTAATTGCGCC TTTTTGCGAACATTT fliR 2022765 - 2023550 + | flagellar biosynthesis protein FliR rcsA 2023835 - 2024458 + | positive regulator for ctr capsule biosynthesis, positive transcription factor TERM 2527 2024494 - 2024461 - T 85 -13.9 -3.04248 | opp_overlap 2024455 2024454, overlap 2024451 2024463 CAACATGCGCTAACA CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG AATAAGATTACTCTG TERM 2528 2024492 - 2024463 - T 73 -10.7 -3.07522 | opp_overlap 2024455 2024454, overlap 2024461 ACATGCGCTAACACA TTCTGACTGGTGG TTTC CCACCAGTCAGGC TGAATAAGATTACTC dsrB 2024690 - 2024502 - | hypothetical protein SF1998 2024853 - 2025080 + | hypothetical protein TERM 2529 2025119 - 2025097 - T 100 -9.9 -5.88565 | gap 1 TGCACAATAAAAAAA TCCCGAC-CC TGAG GGTGTCGGGA TGAAACTTGCTTAAG yedQ 2027674 - 2026190 - | hypothetical protein TERM 2530 2026258 - 2026246 - G 73 -9.1 -3.64703 | GTTTTGCGAGGTAAA GCCGA CGG TCGGC CAATGACTGGAGTTG TERM 2531 2028001 - 2028052 + r 79 -10.2 -3.64049 | gap 1, opp_overlap 2028017, overlap 2028012 ACTATCATTCATTGC AGGCATTG-GGACACCAGGCCGGAT GTG ATCCGGCCTGGTGTTAATGATACCC TTTCAAACTTCTTCC TERM 2532 2028012 - 2028040 + r 100 -23.3 -3.22491 | opp_overlap 2028017, overlap 2028001 TTGCAGGCATTGGGA CACCAGGCCGGAT GTG ATCCGGCCTGGTG TTAATGATACCCTTT TERM 2533 2028035 - 2028017 - R 86 -14.6 -2.62983 | opp_overlap 2028012 2028001 GGCATTGGGACACCA GGCCGGAT GTG ATCCGGCC TGGTGTTAATGATAC SF2001 2028237 - 2028055 - | hypothetical protein yedI 2029233 - 2028316 - | hypothetical protein yedA 2029406 - 2030326 + | hypothetical protein vsr 2030785 - 2030315 - | DNA mismatch endonuclease, patch repair protein dcm 2032184 - 2030766 - | DNA cytosine methylase TERM 2534 2031453 - 2031475 + g 75 -4.9 -4.78752 | gap 1, overlap 2031470 GCCCAGTTCGTCCAG CG-TCTGCAT GATG ATGCGGAACG TTTTTCCCTTATCGT TERM 2535 2032213 - 2032193 - R 83 -13.3 -3.15999 | CCTGCATAGATTTAA CCGGCCATC TGA GATGGCCGA CAGGTTAACATAATT SF2007 2033901 - 2033089 - | hypothetical protein SF2008 2034242 - 2033958 - | hypothetical protein TERM 2536 2034753 - 2034742 - g 70 -5.8 -4.17789 | opp_overlap 2034742 CAACTACAAAGCAAA TGGC GATG GCCA TGGTTTATCTGCAAC SF2009 2034263 - 2035111 + | putative outer membrane pore protein SF2010 2035987 - 2035082 - | insertion element IS2 transposase InsD SF2011 2036310 - 2035945 - | insertion sequence 2 OrfA protein TERM 2537 2036627 - 2036656 + H 100 -13.7 -5.4756 | opp_overlap 2036624 2036622 2036619 2036617 2036627 TAAAACATAACACCA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT TERM 2538 2036656 - 2036627 - H 84 -13.7 -2.89741 | opp_overlap 2036627, overlap 2036624 2036622 2036619 2036617 TAAAACATAACACCA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT insA 2037211 - 2037486 + | IS1 ORF1 insB 2037513 - 2037908 + | IS1 ORF2 yedU 2037954 - 2038805 + | chaperone protein HchA TERM 2539 2038873 - 2038841 - T 76 -12.1 -2.67017 | opp_overlap 2038841, overlap 2038840 AAGCGCATAATCAAT CGCAGCCACGT TAATACTCACG ACGTGGCTGCG TTTTTTCACGGTTAA TERM 2540 2038841 - 2038873 + T 100 -12.8 -5.055 | opp_overlap 2038841 2038840 AAGCGCATAATCAAT CGCAGCCACGTT AATACTCAC GACGTGGCTGCG TTTTTTCACGGTTAA yedV 2040271 - 2038913 - | putative 2-component sensor protein yedW 2040942 - 2040271 - | transcriptional regulatory protein YedW SF2017 2041075 - 2041488 + | hypothetical protein TERM 2541 2041561 - 2041506 - f 72 -6.3 -4.323 | gap 2, opp_overlap 2041506 CGTAAATATGTAAAA GCTGATCTCTGCT-A-CTGTTAGGGAG GTGA CTCCCTGACAGATTAACAGTAAACAGC TCTTGTTGGTTAACG SF2019 2042602 - 2043237 + | putative sulfite oxidase subunit YedZ SF2020 2043495 - 2044145 + | hypothetical protein TERM 2542 2044123 - 2044145 + F 81 -3.4 -5.44119 | overlap 2044128 GTAGCGAAGAAGTGG TCGAGGAGAT GAT GTCTCATTGA TTTTTTTGCGCTGAC TERM 2543 2044235 - 2044259 + F 100 -9.4 -5.62045 | gap 1, opp_overlap 2044235 2044232 AGTAAGACAAACTCA GACACG-CTCA TACT TGAGTCGTGTC TTTTTTATTATGTCT TERM 2544 2044925 - 2044911 - f 78 -5.8 -4.77986 | opp_overlap 2044910 TCAAAGAGTTAAAAA TTTTTC TTG GAAAAA ATGTCTTAAAATCGT TERM 2545 2045176 - 2045208 + F 100 -8.4 -5.63236 | gap 1, opp_overlap 2045122 2045176 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT SF2021 2045549 - 2046217 + | hypothetical protein TERM 2546 2046257 - 2046225 - f 86 -13.6 -3.16564 | gap 1, opp_overlap 2046225 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT TERM 2547 2046225 - 2046257 + F 89 -11.4 -4.08919 | gap 1, opp_overlap 2046225 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT SF2023 2047253 - 2048461 + | iso-IS10R ORF TERM 2548 2049555 - 2049580 + T 72 -10.3 -2.80784 | opp_overlap 2049556 2049557, overlap 2049552 ACTGACTCCGGAAAA ACGGAGGCCCG CCCC CGGGCCTCCCC TGATTCATCCGTTTC TERM 2549 2049579 - 2049556 - T 100 -13.8 -4.58395 | opp_overlap 2049555 2049552, overlap 2049557 CTGACTCCGGAAAAA CGGAGGCCCG CCCC CGGGCCTCCC CTGATTCATCCGTTT TERM 2550 2049578 - 2049557 - T 100 -17.3 -3.34716 | opp_overlap 2049555 2049552, overlap 2049556 TGACTCCGGAAAAAC GGAGGCCCG CCCC CGGGCCTCC CCTGATTCATCCGTT SF2024 2050071 - 2049694 - | hypothetical protein SF2025 2051248 - 2050214 - | IS600 ORF2 insB 2051323 - 2051826 + | IS1 ORF2 TERM 2551 2051910 - 2051894 - T 100 -10.1 -5.67063 | opp_overlap 2051894 2051893 TCCACTATAAAAAAA CCGCCAA TTT CTGGCGG CTTATATATTAATCA SF2027 2052401 - 2051919 - | hypothetical protein SF2028 2054418 - 2052469 - | putative tail protein TERM 2552 2053682 - 2053692 + g 79 -2.4 -5.28826 | GGGCTAATGCGCAAC GAGC GGA GCAC TTTTTTCTGCGATTT SF2029 2054838 - 2054503 - | bacteriophage protein TERM 2553 2054588 - 2054576 - G 91 -5.5 -5.41143 | overlap 2054577 GACTGGGTAAAAAAA CGCAG GAT CTGCA TGCTGGTCTTAAAAA SF2030 2055194 - 2054838 - | hypothetical protein SF2031 2056690 - 2055194 - | putative sheath protein TERM 2554 2056748 - 2056730 - R 71 -10.2 -2.67143 | ACACGTACCACATCA CCCGCCGC TAT ACGGCGGA ACCAGTAGCTGCTTT SF2032 2057112 - 2056858 - | hypothetical protein SF2033 2058060 - 2057242 - | IS600 ORF2 SF2034 2058398 - 2058096 - | IS600 ORF1 SF2035 2059277 - 2058450 - | ISSfl4 ORF3 TERM 2555 2059024 - 2059041 + g 82 -9.1 -4.19238 | overlap 2059012 TCTTCCAGAAGATTT CTGGCTG TGTT CAGCCGG TTTTCCAGTTCCGAC TERM 2556 2059046 - 2059083 + g 70 -6.2 -4.1585 | overlap 2059047 2059051 TGTTCAGCCGGTTTT CCAGTTCCGACAGTCG TTTTTC TGCCTGTCGGATCTGA TTTTCAAGCTTATGA SF2036 2059644 - 2059297 - | ISSfl4 ORF2 SF2037 2060315 - 2059641 - | ISSfl4 ORF1 TERM 2557 2059979 - 2059967 - G 73 -9.1 -3.62046 | CGATCCGGGCAACAA CAGCC CCA GGCTG TAACGCCTGCTTAGC TERM 2558 2060319 - 2060346 + r 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG SF2038 2060629 - 2060414 - | lysis protein S TERM 2559 2060712 - 2060701 - R 93 -7.2 -5.79595 | TTTGAAAAGAAAAAA CCGC AAAA GCGG GCGAAACGATATATA TERM 2560 2061343 - 2061358 + r 70 -2.4 -5.08483 | overlap 2061338 2061333 AAGTGGCACAAAAAA CCCGCT TGTG GGAGGG TTTTGTTTGCTTTTG SF2039 2062113 - 2061430 - | putative Q antiterminator of prophage SF2040 2062475 - 2062110 - | putative crossover junction endodeoxyribonuclease SF2041 2063462 - 2062476 - | hypothetical protein SF2042 2063814 - 2063536 - | hypothetical protein TERM 2561 2063776 - 2063747 - G 100 -17.1 -3.44319 | opp_overlap 2063746 2063745, overlap 2063748 TTGAATGCATGAGAA CGCCGCCCGTGCC TGCT GGCAGGGGCGGCA GAGTTATCCGAATTG TERM 2562 2063775 - 2063748 - G 100 -18.4 -2.6627 | opp_overlap 2063746 2063745, overlap 2063747 TGAATGCATGAGAAC GCCGCCCGTGCC TGCT GGCAGGGGCGGC AGAGTTATCCGAATT TERM 2563 2063911 - 2063898 - R 100 -9.5 -5.49579 | opp_overlap 2063898 CCAGAAAAAACAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 2564 2063898 - 2063911 + r 70 -9.5 -3.06183 | opp_overlap 2063898 CCAGAAAAAACAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 2565 2064108 - 2064123 + r 83 -9 -4.36411 | opp_overlap 2064108 2064107 ACAGATGACGATAAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 2566 2064202 - 2064252 + r 100 -12.1 -4.64844 | gap 1 TTCAGCATGGATTGA GCCTCAGATTAATGTTAAGCGTCT TGCA GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC TERM 2567 2064462 - 2064447 - R 79 -3.2 -5.42862 | overlap 2064435 ACACCCCTAAAAAAA GGGCAT TTAT ATGTCC AAACATTAATATCAA SF2043 2065124 - 2064789 - | hypothetical protein SF2044 2065552 - 2066397 + | putative integrase for prophage CP-933U SF2045 2066594 - 2067430 + | hypothetical protein TERM 2568 2068614 - 2068602 - g 72 -5.5 -4.56597 | opp_overlap 2068602, overlap 2068604 GCCGCGGGGCAAAAA TGCGA ATG CCGCA TATCGTCCCCCTCTC SF2046 2068281 - 2068652 + | putative integrase SF2047 2068721 - 2069029 + | putative integrase TERM 2569 2069065 - 2069083 + T 82 -11 -3.60814 | opp_overlap 2069062 2069059 TCTGGCAAATTACCA CCACCTCT ACA GGAGGTGG TTCTATATAGACTTT SF2048 2069976 - 2069137 - | IS911 ORF2 TERM 2570 2069545 - 2069556 + g 77 -5.8 -4.63218 | opp_overlap 2069541 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 2571 2069897 - 2069917 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF2049 2070341 - 2070003 - | IS911 ORF1 SF2051 2070932 - 2071234 + | IS600 ORF1 SF2052 2071270 - 2072061 + | IS600 ORF2 TERM 2572 2072318 - 2072341 + F 100 -15.4 -3.78096 | CGCTCGTGATAGCCT GGCGAAGATC ATCC GATCTTCGCC TTATACTTTTGTTTC TERM 2573 2072933 - 2072951 + G 84 -7.4 -4.65895 | overlap 2072935 CCCCGCTATCGCATT TTGATGCG CGC CGCGTCGA TTTTTCCCTCGCACG TERM 2574 2073191 - 2073203 + G 72 -7.7 -3.91084 | opp_overlap 2073191 2073189 2073187 2073186 GGAAAAAACACCAGA TGCCA GCA TGGCA TTTAATTACCGCTGA amn 2072413 - 2073867 + | AMP nucleosidase SF2054 2074210 - 2074926 + | hypothetical protein TERM 2575 2074934 - 2074968 + T 84 -13.9 -2.90382 | opp_overlap 2074939 2074943, overlap 2074939 2074943 ATCTCTAATTATATT TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATTCTT TERM 2576 2074939 - 2074963 + T 77 -9.4 -3.8766 | opp_overlap 2074939 2074943, overlap 2074934 2074943 TAATTATATTTTAAA GAAATCTGTC TTTAT GGCAGATTTC TTTAATCTCATATAA TERM 2577 2075042 - 2075027 - T 75 -3.2 -5.24531 | ATTGCTTATAAAAAA TCCCCG TCCC CAGAGA AATAATATTTATTAA TERM 2578 2075319 - 2075291 - T 100 -19 -5.4387 | opp_overlap 2075286 2075285 ACAGAAATCAAAAAA CCCGGCCACTTT TTTAC AAAGTGGCCGGG TAAAAATAATTTTTA TERM 2579 2075320 - 2075334 + T 79 -4.4 -5.13473 | overlap 2075286 2075285 TACAAAGTGGCCGGG TAAAAA TAA TTTTTA TTTTTTAACTGTCCT TERM 2580 2076435 - 2076455 + T 75 -6.2 -4.43681 | TAAGAATATTCAGGC TACCGTTA ATCAG TAGCGGTA TTTTCGTATTCCCTG TERM 2581 2076771 - 2076761 - T 79 -3.2 -5.42862 | ATAGCTGCAAAAAAA GCCA TAA TGAC CATATTGAAGCTGTC TERM 2582 2077278 - 2077296 + T 100 -11.7 -4.86133 | opp_overlap 2077278, overlap 2077287 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG TERM 2583 2077296 - 2077278 - T 95 -11.7 -4.12942 | opp_overlap 2077278 2077287 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG cbl 2078253 - 2077303 - | transcriptional regulator Cbl nac 2079272 - 2078355 - | nitrogen assimilation transcriptional regulator TERM 2584 2078826 - 2078864 + g 78 -5.4 -4.8622 | AGCCACAGGGGAATG CTCATAAATCACCGCC ATATCGA GTTGGTGATTTATCAG TTTTTCGTTAAGCAC TERM 2585 2079682 - 2079711 + r 80 -12.3 -3.02946 | opp_overlap 2079688, overlap 2079688 AGAGGAGCCAAATTC AAAAAAGCCTGCT TTCG AGCAGGCTTTTTA CTTTCTAATTACCAA TERM 2586 2079688 - 2079705 + r 100 -11.3 -5.05505 | opp_overlap 2079688, overlap 2079682 GCCAAATTCAAAAAA GCCTGCT TTCG AGCAGGC TTTTTACTTTCTAAT TERM 2587 2079705 - 2079688 - R 100 -11.3 -5.22039 | opp_overlap 2079688 2079682 GCCAAATTCAAAAAA GCCTGCT TTCG AGCAGGC TTTTTACTTTCTAAT erfK 2080667 - 2079732 - | hypothetical protein cobT 2081808 - 2080729 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2082563 - 2081820 - | cobalamin synthase cobU 2083069 - 2082560 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase SF2062 2083899 - 2083081 - | IS600 ORF2 SF2063 2084237 - 2083935 - | IS600 ORF1 SF2064 2084480 - 2084806 + | IS629 ORF1 TERM 2588 2085122 - 2085110 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SF2065 2085021 - 2085689 + | IS629 ORF2 TERM 2589 2086268 - 2086255 - g 70 -3.7 -4.72333 | opp_overlap 2086262, overlap 2086256 AATTAGAGGTAAAAA CGCCC TACC GGGCC ATGAATCACCCGGTC SF2066 2085911 - 2086393 + | hypothetical protein TERM 2590 2086542 - 2086506 - T 82 -10.9 -3.60998 | opp_overlap 2086513, overlap 2086502 2086509 2086513 ACAGATAAGAATCAA TGAGCAATGAGGGTTGC CGG GCAACCCTCATTGAATA AAACGGGAATTACTT TERM 2591 2086539 - 2086509 - T 100 -17 -2.91042 | opp_overlap 2086513, overlap 2086506 2086502 2086513 GATAAGAATCAATGA GCAATGAGGGTTGC CGG GCAACCCTCATTGA ATAAAACGGGAATTA TERM 2592 2086535 - 2086513 - T 100 -16.4 -3.30956 | opp_overlap 2086513, overlap 2086509 2086506 2086502 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA TERM 2593 2086513 - 2086535 + T 100 -16.4 -3.05384 | opp_overlap 2086513 2086509 2086506 2086502 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA yeeX 2086947 - 2086552 - | hypothetical protein TERM 2594 2086860 - 2086843 - G 70 -5.6 -4.329 | GAACAGACGAACAAA TTCCAG TACGTC CTGGAA TGAAGGCTTGGTAGT TERM 2595 2087217 - 2087205 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SF2069 2087164 - 2087784 + | IS629 ORF2 sbcB 2088329 - 2089753 + | exonuclease I yeeD 2090023 - 2089796 - | hypothetical protein yeeE 2091095 - 2090037 - | putative transport system permease protein TERM 2596 2091253 - 2091226 - R 100 -12.8 -6.04419 | opp_overlap 2091226 AAAAGAATAAAAAAA CCGGAGCCAAAT GTTC ATTCGACTCCGG TTTATTATTAGAAAA TERM 2597 2091226 - 2091253 + r 81 -8.4 -4.44667 | opp_overlap 2091226 AAAAGAATAAAAAAA CCGGAGCCAAAT GTTC ATTCGACTCCGG TTTATTATTAGAAAA yeeF 2092632 - 2091274 - | putative amino acid/amine transport protein TERM 2598 2092813 - 2092787 - R 87 -7.3 -5.26875 | opp_overlap 2092790, overlap 2092790 GTTTGAAGCAAAAAA TAACCGACGCT AATTA AACGTCGGTTT TTAATCATTTTTTGA TERM 2599 2092790 - 2092810 + r 82 -6.8 -4.88129 | opp_overlap 2092790 2092787 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTTAATCATTTTT TERM 2600 2092810 - 2092790 - R 89 -9 -4.72473 | opp_overlap 2092790, overlap 2092787 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTTAATCATTTTT yeeY 2093828 - 2092845 - | putative LYSR-type transcriptional regulator SF2075 2094698 - 2093874 - | putative enzyme of sugar metabolism yoeB 2095035 - 2094781 - | hypothetical protein insB 2095452 - 2095057 - | IS1 ORF2 insA 2095754 - 2095479 - | IS1 ORF1 yefM 2096060 - 2095788 - | antitoxin YefM hisL 2096343 - 2096384 + | his operon leader peptide TERM 2601 2096449 - 2096475 + F 100 -19.5 -5.4505 | opp_overlap 2096449 TGAACGCATGAGAAA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG TERM 2602 2096475 - 2096449 - f 100 -20.2 -3.99405 | opp_overlap 2096449 TGAACGCATGAGAAA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG TERM 2603 2096833 - 2096845 + G 81 -10.5 -3.64703 | CGTCGTCTGGATTTC GGCGG CTG CCGCC TTTCGCTGGCAACGC TERM 2604 2097386 - 2097376 - g 70 -6.8 -4.00407 | opp_overlap 2097379, overlap 2097379 ATGGAAAAACTGAAA GCAC TGG GTGC CAGTTCAATCCTGGT hisG 2096530 - 2097429 + | ATP phosphoribosyltransferase hisD 2097435 - 2098739 + | histidinol dehydrogenase TERM 2605 2099595 - 2099609 + G 72 -7.1 -4.16943 | opp_overlap 2099592 2099593 2099590 CACTGAAAGAGATCC CCTGC GTGGA GCAGG TTTTCGACTCTGAAA hisC 2098736 - 2099806 + | histidinol-phosphate aminotransferase TERM 2606 2100557 - 2100570 + G 70 -5.9 -4.28487 | opp_overlap 2100557, overlap 2100546 2100552 CCCTCGGCGACAAAC GCGGT ATTT GCCGC TTTGGTTTTGTGCTG hisB 2099806 - 2100873 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2100873 - 2101463 + | imidazole glycerol phosphate synthase subunit HisH hisA 2101463 - 2102200 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 2102182 - 2102958 + | imidazole glycerol phosphate synthase subunit HisF hisI 2102952 - 2103563 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 2607 2103700 - 2103725 + T 100 -14.7 -4.21607 | opp_overlap 2103700 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA TERM 2608 2103725 - 2103700 - T 100 -14.7 -5.75945 | opp_overlap 2103700 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA wzzB 2104762 - 2103749 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 2609 2104168 - 2104196 + g 72 -4.5 -4.65895 | GCTCCTGCGCGACCA CTTCCTGGGTTCT TAA AGAGTCCTGCAAG TTTTTCCGTCCCAGA TERM 2610 2104861 - 2104841 - R 76 -8.3 -4.0865 | GGTAACAAAAGACAA TCAGGGC GTAAATA GCCCTGA TAACAAGATGTTAGT TERM 2611 2105644 - 2105628 - R 76 -8.7 -4.07687 | opp_overlap 2105628 2105629, overlap 2105629 ATCGCTGCGGTAAAA CCAACGG GAA CCGTTGA TTTGATGACCATAAC TERM 2612 2105643 - 2105629 - R 70 -10 -3.04398 | opp_overlap 2105628 2105629, overlap 2105628 TCGCTGCGGTAAAAC CAACGG GAA CCGTTG ATTTGATGACCATAA TERM 2613 2106032 - 2106060 + r 76 -8.3 -4.1196 | opp_overlap 2106053, overlap 2106033 CTGTGAATCATGATG TTTTTAGCATCGT GAT AAGATGCTAAAAG TTTTAACGCTACGTT TERM 2614 2106033 - 2106059 + r 70 -9.6 -3.06694 | opp_overlap 2106053, overlap 2106032 TGTGAATCATGATGT TTTTAGCATCGT GAT AAGATGCTAAAA GTTTTAACGCTACGT TERM 2615 2106214 - 2106192 - R 100 -11.2 -5.75945 | opp_overlap 2106191 ATTTGGCAAAAAAAA GCCCGGTGCA ATA TACGCCGGGC CTCAATTTTATTGTT gnd 2107648 - 2106242 - | 6-phosphogluconate dehydrogenase SF2092 2108664 - 2108113 - | hypothetical protein SF2093 2109364 - 2108765 - | hypothetical protein TERM 2616 2109083 - 2109057 - G 70 -5.2 -4.43213 | opp_overlap 2109065, overlap 2109058 GGGAACAGAGGAAAA CGCAAATATTGT TCA ACAACAATTGCA TGGTGCTCAACTAAT TERM 2617 2109315 - 2109292 - G 70 -4 -4.6644 | overlap 2109303 AACACACCGTAAAAA TTAAAAAGAT AGCA ATCTTATTAA ATTGCCCGACCATGC TERM 2618 2109530 - 2109494 - R 100 -18.3 -4.74989 | opp_overlap 2109494 2109496 2109500 2109502 2109514, overlap 2109514 AAACAATACACAAAA TACAAATCCAACGGCAA TTA TTGCCGTTGTATTTGTA TGTTCAACATACAAA TERM 2619 2109494 - 2109530 + r 100 -18.3 -3.04144 | opp_overlap 2109494 2109514, overlap 2109496 2109500 2109502 2109514 AAACAATACACAAAA TACAAATCCAACGGCAA TTA TTGCCGTTGTATTTGTA TGTTCAACATACAAA TERM 2620 2109496 - 2109528 + r 100 -16.5 -3.07895 | opp_overlap 2109494 2109514, overlap 2109494 2109500 2109502 2109514 ACAATACACAAAATA CAAATCCAACGGCAA TTA TTGCCGTTGTATTTG TATGTTCAACATACA TERM 2621 2109500 - 2109524 + r 91 -11.5 -4.2074 | opp_overlap 2109494 2109514, overlap 2109496 2109494 2109502 2109514 TACACAAAATACAAA TCCAACGGCAA TTA TTGCCGTTGTA TTTGTATGTTCAACA TERM 2622 2109502 - 2109522 + r 100 -14.1 -3.70043 | opp_overlap 2109494 2109514, overlap 2109500 2109496 2109494 2109514 CACAAAATACAAATC CAACGGCAA TTA TTGCCGTTG TATTTGTATGTTCAA TERM 2623 2109514 - 2109556 + r 100 -26.8 -3.10715 | opp_overlap 2109494 2109514, overlap 2109502 2109500 2109496 2109494 ATCCAACGGCAATTA TTGCCGTTGTATTTGTATGT TCA ACATACAAATACAACGGCAA TTCAATCATAGTAAA TERM 2624 2109556 - 2109514 - R 100 -26.8 -2.7566 | opp_overlap 2109502 2109500 2109496 2109494 2109514, overlap 2109494 ATCCAACGGCAATTA TTGCCGTTGTATTTGTATGT TCA ACATACAAATACAACGGCAA TTCAATCATAGTAAA SF2094 2110072 - 2109581 - | hypothetical protein rfbJ 2110519 - 2110130 - | glycosyl transferase rfbI 2110956 - 2110582 - | glycosyl translocase rfc 2112108 - 2110960 - | O-antigen polymerase TERM 2625 2111113 - 2111126 + g 80 -5.3 -5.00846 | opp_overlap 2111106 2111113 AAAAAGTATTAACGA CATCA TTAA TGATG TTTTTGTACTATTTA TERM 2626 2111618 - 2111606 - G 100 -6.9 -5.76949 | GATTTGGAAAAAAAA GCCCC ATC GGGAC GAAAAAAGAACTCGC rfbG 2112997 - 2112128 - | dTDP-rhamnosyl transferase TERM 2627 2112381 - 2112396 + g 74 -7.6 -4.00684 | overlap 2112392 ACTTGGTTGTTTTCA TGCTGT CTGT ACAGCA TTGTTGGTTTTCTAT TERM 2628 2112923 - 2112934 + g 81 -4.4 -5.11063 | opp_overlap 2112923 TGATATAAAAATTGA GATG TCTA CATC TTTTTGTTCAATAAT rfbF 2113916 - 2113026 - | dTDP-rhamnosyl transferase rfbE 2115202 - 2113946 - | polysaccharide biosynthesis protein TERM 2629 2114100 - 2114074 - G 71 -2.2 -4.94487 | overlap 2114076 CCATAAAATACAAAA GGGCTAAATAAG GAA CCAATTCAGCAC AATGAATCAAAGCAG rfbC 2115763 - 2115218 - | dTDP-6-deoxy-L-mannose-dehydrogenase rfbA 2116646 - 2115768 - | glucose-1-phosphate thymidylyltransferase TERM 2630 2116126 - 2116141 + g 74 -3.3 -4.90266 | TAGAAATAAAGCCCA GTAAC CGCATA GTTAC TTTTTGGTTCCTGCG TERM 2631 2116660 - 2116700 + r 79 -8.3 -4.2528 | opp_overlap 2116668 ATTTCACCATTCCTT TTAATTCATCTCGCTCTAG CAT CATGAGCGAGATGCAATAA TTTGTTAAATTGCCG rfbD 2117604 - 2116705 - | dTDP-4-dehydrorhamnose reductase rfbB 2118689 - 2117604 - | dTDP-glucose 4,6 dehydratase galF 2119955 - 2119062 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalF wcaM 2121524 - 2120130 - | putative colanic acid biosynthesis protein TERM 2632 2120249 - 2120264 + g 79 -4 -5.03314 | CATGAACATTTGCAA GAGACA GCAG TGTTTC TTTTTTCGCCATAAA TERM 2633 2121486 - 2121468 - G 70 -10.3 -3.18383 | AGGGGTATGGAGGAA GGCAAGC GCCGA GCTTGCC GTCAGGAAGGTGCGT wcaL 2122755 - 2121535 - | putative colanic acid biosynthesis glycosyl transferase TERM 2634 2122170 - 2122181 + g 86 -5.8 -5.03145 | CGGCGATTTTTTCTC TGGG GCAG CCCA TTTTTTGCAGCCTTC wcaK 2124032 - 2122752 - | putative pyruvyl transferase TERM 2635 2124113 - 2124165 + r 87 -10.6 -4.08216 | gap 1, opp_overlap 2124147 2124162, overlap 2124100 2124103 2124148 GATGCGACGCTGGCG CGTCTTATCAGGCCTACAGGTCCCG AGCA CAGAACC-GTAGGACGGATAAGGCG TTTTACGCCGCATCC TERM 2636 2124174 - 2124162 - R 70 -9.1 -3.37796 | opp_overlap 2124113 2124148 CCGTAGGACGGATAA GGCGT TTT ACGCC GCATCCGGCAACCGT wzxC 2125690 - 2124212 - | colanic acid exporter wcaJ 2127086 - 2125692 - | putative UDP-glucose lipid carrier transferase cpsG 2128511 - 2127141 - | phosphomannomutase TERM 2637 2128537 - 2128559 + r 81 -3.4 -5.3658 | overlap 2128544 TTTTTCAGGCAATAG TTGGCCCT GACCGAA ACGGCCAA TTTTATTTTTGTCGT TERM 2638 2128657 - 2128642 - R 72 -5.4 -4.3898 | gap 1, overlap 2128647 ATCAGGCCTACAAAA CCGAACC GTA GGT-CGG ATAAGGCGTTCACGC TERM 2639 2128688 - 2128647 - R 79 -11.5 -3.41587 | opp_overlap 2128670, overlap 2128642 2128662 GCCTACAAAACCGAA CCGTAGGTCGGATAAGGCG TTCA CGCCGCATCCGACAAACAG CGCCTGATGCGACGT TERM 2640 2128710 - 2128662 - R 77 -10.2 -3.30124 | opp_overlap 2128670, overlap 2128647 CCGTAGGTCGGATAA GGCGTTCACGCCGCATCCGACA AACAG CGCCTGATGCGACGTTTACACC CGTCCGTAGCGATCC cpsB 2130140 - 2128704 - | mannose-1-phosphate guanyltransferase wcaI 2131366 - 2130143 - | glycosyl transferase TERM 2641 2130510 - 2130534 + g 76 -3.5 -5.00616 | overlap 2130512 GGGAAAAATTGCATG TTGCGCAGT CCACGCT GCTGCGCCA TTTTTTCCAGCCGCG wcaH 2131842 - 2131363 - | GDP-mannose mannosyl hydrolase wcaG 2132810 - 2131842 - | putative nucleotide di-P-sugar epimerase or dehydratase gmd 2133934 - 2132813 - | GDP-D-mannose dehydratase wcaF 2134508 - 2133960 - | putative colanic acid biosynthesis acetyltransferase WcaF insA 2134704 - 2134979 + | IS1 ORF1 insB 2135006 - 2135401 + | IS1 ORF2 TERM 2642 2135905 - 2135892 - T 76 -5.3 -4.84146 | ACCAGATAAAAGAAA CGTAA TATC TTACG ATGGTTGTGTGGCGA wcaC 2137430 - 2136213 - | glycosyl transferase TERM 2643 2137242 - 2137224 - G 70 -6.7 -4.09503 | opp_overlap 2137236 AAACAGACGAAACAA CGCAATG TTCGC CATCGCG GTCATCCGCGGCGTA wcaB 2137915 - 2137427 - | putative colanic acid biosynthesis acetyltransferase WcaB SF2124 2141012 - 2138850 - | tyrosine kinase TERM 2644 2140797 - 2140812 + g 72 -6.1 -4.33767 | GCCGATATCCTGCAC CAGCG AATTGC CGCTG TTTTGCTCGATTTGT wzb 2141458 - 2141015 - | tyrosine phosphatase wza 2142603 - 2141464 - | putative polysaccharide export protein TERM 2645 2144036 - 2143992 - g 95 -15.7 -2.90075 | opp_overlap 2144001 TTTCCGCTAATCAGA CGCTACGCCAGCGGACTACCG AAG CGGTAATGCGCCTGCTTAGCG GGCAAAAAGAAGATG TERM 2646 2144076 - 2144048 - g 70 -5.1 -4.40963 | overlap 2144051 AGCGGGCAAAAAGAA GATGCGGAACTGG ACG CCAAAACCGCGTC CATGCTGGTGGATCA TERM 2647 2144678 - 2144666 - g 70 -4.1 -4.72272 | overlap 2144667 CCGCTGGATGAAAAA CGTGA ATA TCACA CCATTGCCGGGCTGT yegH 2143262 - 2144845 + | putative transport protein asmA 2147150 - 2145297 - | putative assembly protein TERM 2648 2146284 - 2146313 + g 70 -7.1 -4.128 | GTCAAGATTCAGTTG CGGGAATTGCAGT CTCA GCTGCCATTCCGG TTTCTCTGTCAGCGT dcd 2147753 - 2147172 - | deoxycytidine triphosphate deaminase udk 2148486 - 2147845 - | uridine kinase TERM 2649 2147886 - 2147896 + g 70 -4.6 -4.56597 | opp_overlap 2147882 2147880 CTTTCAATATATCGA TCGC GAT GCGG TTTTTCCCGCCGCGC TERM 2650 2148952 - 2148971 + r 70 -5 -4.38712 | gap 1, overlap 2148955 CACTGTGGTTCCCGA CGTCCATCA TGA TGGTGG-CG TTTTATCGCCATGCC SF2132 2150444 - 2149248 - | ISSfl2 ORF TERM 2651 2149301 - 2149273 - G 71 -3.2 -4.82901 | TGCGGGGTATAAAAA GTCCCG-TCGCGCA TCA TG-GCGAACAGAAC GTCGCAGCGTCGTCT TERM 2652 2150281 - 2150306 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 2150261, overlap 2150267 2150282 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 2653 2150692 - 2150717 + r 73 -4.6 -4.81551 | overlap 2150693 TGGTTGTCCTGCTGA CGCCCGGAGA CGATCC TCTCAGGGCA TTTTTGATATGGGTA TERM 2654 2150809 - 2150823 + r 93 -10 -4.67353 | ATCTGCTGCGCCATC GCAACC CAC GGTTGC TTTTTGAGTCGCTGC TERM 2655 2151173 - 2151138 - R 93 -12 -3.75153 | gap 1, overlap 2151142 2151143 2151157 2151158 CGTGCGGAACGCAAA CACATTTCCGAAAGCGA AAC CCGCTTTCGGAA-CGCG ATGGAATATTCCGCT TERM 2656 2151170 - 2151142 - R 85 -12.5 -3.30106 | overlap 2151138 2151143 2151157 2151158 CGGAACGCAAACACA TTTCCGAAAGCGA AAC CCGCTTTCGGAAC GCGATGGAATATTCC TERM 2657 2151169 - 2151143 - R 90 -16 -2.57581 | overlap 2151142 2151138 2151157 2151158 GGAACGCAAACACAT TTCCGAAAGCGA AAC CCGCTTTCGGAA CGCGATGGAATATTC alkA 2154521 - 2153673 - | 3-methyl-adenine DNA glycosylase II TERM 2658 2154467 - 2154448 - G 73 -11.4 -2.62263 | ACCGTTTCCACACCA CTCACCGC ACGG GCGGCGAG AAATCCCAACATCCA TERM 2659 2154759 - 2154741 - R 70 -5.2 -4.4874 | opp_overlap 2154742, overlap 2154742 GCTAAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG TERM 2660 2155496 - 2155483 - R 71 -3.8 -4.81249 | GGCGAAACCGAAAAA GGCA TCGCCC TGCC GATCCTGCCGTGGTA TERM 2661 2156014 - 2156054 + r 80 -6.1 -4.83615 | gap 1, opp_overlap 2156015, overlap 2156015 TTTCGTTAAAAGAAA ATGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCAG TTTTTCTGCCGCCTG TERM 2662 2156015 - 2156053 + r 75 -9.6 -3.49687 | gap 1, opp_overlap 2156015, overlap 2156014 TTCGTTAAAAGAAAA TGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCA GTTTTTCTGCCGCCT TERM 2663 2156053 - 2156015 - R 100 -9.6 -5.07652 | gap 1, opp_overlap 2156015 2156014 TTCGTTAAAAGAAAA TGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCA GTTTTTCTGCCGCCT SF2135 2157968 - 2156436 - | putative chaperonin SF2136 2158717 - 2157956 - | hypothetical protein TERM 2664 2158222 - 2158206 - G 71 -9.5 -3.53444 | TCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC GGCATCTTCATCGGT TERM 2665 2158453 - 2158432 - G 72 -5.2 -4.56597 | gap 1, overlap 2158434 CCGCCTCGGCAAAAA GTCGCTGAC GAACG GTCAGC-AC AATATCCGTGGCGAG TERM 2666 2158729 - 2158702 - G 74 -8.4 -3.92373 | overlap 2158705 CAGCGGATGCATAAA CCAGACGCCAGC TCAC ACTGACGTCCAG CCTTTTGGCGCTTCC SF2137 2159373 - 2158714 - | hypothetical protein TERM 2667 2159185 - 2159195 + g 72 -5.4 -4.56597 | GAACGTCACAATGCC GAGT TCC ACTC TTTTTAAAGCCAGCG TERM 2668 2159970 - 2159945 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 2159953, overlap 2159946 2159960 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 2669 2160950 - 2160978 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SF2138 2159807 - 2161003 + | ISSfl2 ORF TERM 2670 2161482 - 2161460 - g 71 -10.6 -2.93853 | opp_overlap 2161460 2161461, overlap 2161459 TGTTGGTAACCAAAT CTCCAGTGGT GAT ACCACCGGAA TTGTGGTGATCACCC SF2139 2161005 - 2162057 + | acriflavin resistance protein A TERM 2671 2162054 - 2162043 - f 80 -5.8 -5.09173 | opp_overlap 2162053 GAATACGCGAAAAAA GGAG CACG CTCC TGATGCAGGTGTTAC TERM 2672 2162082 - 2162101 + F 72 -6.4 -4.33819 | opp_overlap 2162084 TACCCCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 2673 2162118 - 2162144 + F 71 -9.5 -3.13403 | gap 1, overlap 2162117 TTATTATGCGTCCTG TCGCCACCA-CG CTGC TGATGGTGGCGA TCTTACTCGCCGGGA TERM 2674 2163363 - 2163341 - f 73 -4.1 -4.7657 | gap 1 GAAAAAGGCGAAAAA CCGTTG-GCG GCGG CGCTCAAGGG CGCAGGTGAAATCGG TERM 2675 2165663 - 2165697 + G 73 -11.4 -2.65815 | opp_overlap 2165685 2165686, overlap 2165654 TTCGCCTCGACGCAG CTGGCTCCGACGATTT CGC AAATCGACGGTGTCGG TGATGTCGATGTCGG TERM 2676 2165911 - 2165889 - g 78 -7.6 -4.30416 | opp_overlap 2165891 2165902, overlap 2165891 2165902 2165905 ACGATGAACTGAAAA CCGCCGCTGA ATA TCAGCCGCTG ATTATTCACTACAAC TERM 2677 2167658 - 2167697 + G 81 -9.3 -4.07568 | gap 2 ACCCAGCTTGGTGTG CCTTCGACGGTGCGCGGCA GTTT TGCCG-GCACGG-CGCAGG TTTTCCAGGAGACGA TERM 2678 2167943 - 2167927 - g 77 -3 -5.07486 | gap 1, opp_overlap 2167927 2167929, overlap 2167929 CATCGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG yegO 2165180 - 2168245 + | multidrug efflux system subunit MdtC yegB 2168246 - 2169661 + | multidrug efflux system protein MdtE TERM 2679 2169981 - 2169937 - g 78 -8.4 -4.20025 | gap 1, opp_overlap 2169943, overlap 2169933 AATTCGGAAGATAAA CCCGGCCCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAGTTCTGG GTGGTCGATCAAAAC TERM 2680 2169943 - 2169975 + G 80 -12 -3.37975 | gap 1, opp_overlap 2169933 2169937 GAAGATAAACCCGGC CCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAG TTCTGGGTGGTCGAT baeS 2169658 - 2171061 + | signal transduction histidine-protein kinase BaeS TERM 2681 2171492 - 2171503 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCATG TERM 2682 2171710 - 2171678 - g 75 -4.7 -4.81551 | CAGCCACATTAAAAA TCTGCGCCGCAAGCT GGA ATCTCTCGACGCCGA ACAGTCATTTATCCG baeR 2171058 - 2171780 + | DNA-binding transcriptional regulator BaeR TERM 2683 2171937 - 2171920 - f 71 -7.7 -3.84514 | opp_overlap 2171920, overlap 2171915 ACTTTAATCAGTAAA CAGCACC TTTA GATGCTG TTTTCGATAAGCAAT SF2145 2171932 - 2172303 + | hypothetical protein TERM 2684 2173196 - 2173182 - g 73 -9.2 -3.69395 | overlap 2173179 TTTATGATCGAAGAA GCCCAG CGT CCGGGC GAGTATATGACCGCG TERM 2685 2173680 - 2173670 - g 78 -8.2 -4.24948 | TGAGCACATGGAAAA CGCC AAA GGCG AAGCTATGCCGGTCG yegQ 2172450 - 2173811 + | hypothetical protein TERM 2686 2173945 - 2173976 + T 100 -8.1 -5.28176 | overlap 2173948 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTGTACATAAG TERM 2687 2173948 - 2173973 + T 93 -9.8 -4.73105 | overlap 2173945 GGAACCACCTCCTTA GCCTGTGTAA TCTCCC TTACACGGGC TTATTTTTTGTACAT SF2148 2174530 - 2174153 - | hypothetical protein TERM 2688 2175358 - 2175344 - g 71 -2.7 -4.77757 | opp_overlap 2175348 CCGGAAAAATTAAAA GCCGC GCTGG GTGGC GTCTCTTACATCATT SF2149 2174876 - 2175775 + | lipid kinase TERM 2689 2175850 - 2175806 - T 86 -13 -3.39595 | gap 1, opp_overlap 2175823 TTGAACCAGGGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTTATCCGGCA-TACAGA ACAATACTACACCGT gatR 2176636 - 2175857 - | galactitol utilization operon repressor TERM 2690 2176479 - 2176492 + g 74 -2.3 -5.06414 | opp_overlap 2176478, overlap 2176480 GCACCGCCATGAAAG CGCGT AACC ACGCC TTTTTGTTCGAGAAA TERM 2691 2176706 - 2176733 + r 76 -9.1 -3.74693 | gap 1, opp_overlap 2176705 2176707 2176708, overlap 2176707 TCTGTTTTGCACAAT AC-CGGGCCAGC ATCAC GCTGGCCCGCGG TTTCATGGAATGAGC TERM 2692 2176707 - 2176732 + r 79 -12.6 -2.84602 | gap 1, opp_overlap 2176705 2176707 2176708, overlap 2176706 CTGTTTTGCACAATA C-CGGGCCAGC ATCAC GCTGGCCCGCG GTTTCATGGAATGAG TERM 2693 2176731 - 2176707 - R 83 -13.5 -3.21276 | opp_overlap 2176707 2176706, overlap 2176705 2176708 CTGTTTTGCACAATA CCGGGCCAGCA TCA CGCTGGCCCGC GGTTTCATGGAATGA TERM 2694 2176730 - 2176708 - R 95 -17 -2.52623 | opp_overlap 2176707 2176706, overlap 2176707 2176705 TGTTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCATGGAATG gatD 2177776 - 2176736 - | galactitol-1-phosphate dehydrogenase insB 2178204 - 2177809 - | IS1 ORF2 insA 2178506 - 2178231 - | IS1 ORF1 gatC 2179956 - 2178601 - | PTS system galactitol-specific enzyme IIC gatB 2180244 - 2179960 - | galactitol-specific PTS system component IIB gatA 2180727 - 2180275 - | galactitol-specific PTS system component IIA gatZ 2181999 - 2180737 - | putative tagatose 6-phosphate kinase 1 gatY 2182882 - 2182028 - | tagatose-bisphosphate aldolase TERM 2695 2183027 - 2183006 - R 100 -13.7 -5.58209 | TGAAAGGCAAAAAAA CGGCCTCCC GATA GGGAAGCCG TAGCAAAGTGCGCGT SF2159 2184242 - 2183190 - | fructose-bisphosphate aldolase TERM 2696 2184598 - 2184586 - H 74 -3.3 -5.06414 | overlap 2184590 CGCCTTTAACAAAAA CGTAC TAG GTCCG ACCTCGAAGATTGCG TERM 2697 2185144 - 2185126 - H 70 -9.6 -2.98823 | opp_overlap 2185110, overlap 2185128 TGGCGGCGACACAGA CACCATAG GTG CTATGGCG ACGGCGATTTGCGGC TERM 2698 2185349 - 2185379 + G 80 -11.9 -3.33162 | gap 1, overlap 2185343 CGGTGATGGTCGTCG GCG-CGGCGGTCAT TGAC GTGATCGCCGACGC TTATGCCCTCCCCTG SF2161 2185282 - 2186247 + | putative kinase TERM 2699 2186282 - 2186330 + F 95 -11 -4.39568 | opp_overlap 2186282, overlap 2186284 ATGCTGTACTCAATA GGCCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGGTA TTTTGCTATCTAACT TERM 2700 2186284 - 2186328 + F 100 -15.8 -3.79993 | opp_overlap 2186282, overlap 2186282 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA SF2162 2186692 - 2187900 + | iso-IS10R ORF TERM 2701 2188173 - 2188204 + T 81 -5.1 -5.12707 | gap 1, opp_overlap 2188172 2188173 CACCGGGCAAAATAT TGCCATGCTCCAGC ACCCC GCTGC-GCACGGCA TTTTTTACCGTTTCG TERM 2702 2188254 - 2188236 - T 83 -8.8 -4.25401 | CAAACTTAATATAAA GCGGCG TGTTATC CGCCGC TAAAATACGCTCGTT yegX 2189174 - 2188353 - | hypothetical protein thiD 2190039 - 2189239 - | phosphomethylpyrimidine kinase TERM 2703 2189705 - 2189691 - G 73 -9.2 -3.66178 | opp_overlap 2189692 2189694, overlap 2189676 CCGCCGAAGGTGAAA GCAGCG GGT CGCCGC TTTTTGCCAGCATAA TERM 2704 2189694 - 2189705 + g 77 -7.2 -4.57569 | opp_overlap 2189676 2189691, overlap 2189692 CCGAAGGTGAAAGCA GCGG GTCG CCGC TTTTTGCCAGCATAA thiM 2190824 - 2190036 - | hydroxyethylthiazole kinase yohL 2191319 - 2191047 - | hypothetical protein TERM 2705 2192354 - 2192372 + H 73 -7.4 -4.08919 | CTCTCTGCTCGCTAA GGATGCTT TTA GGGCATCC TTTCATTTACACTTT yohN 2192490 - 2192828 + | hypothetical protein TERM 2706 2192854 - 2192834 - T 100 -11.1 -5.42259 | overlap 2192835 TCATCGCTAAAAAAA GCCCCCTCA TCA TGAGGGGGA AATGCAGACACCTTG TERM 2707 2192853 - 2192835 - T 100 -14.6 -3.84633 | overlap 2192834 CATCGCTAAAAAAAG CCCCCTCA TCA TGAGGGGG AAATGCAGACACCTT yehA 2193943 - 2193128 - | putative type-1 fimbrial protein TERM 2708 2193656 - 2193668 + g 79 -4.1 -5.14163 | GCTCTGATTATTTGA CAACG TGA TGTTG TTTTTATTGGTCCAT yehB 2196439 - 2193959 - | putative outer membrane protein insA 2196991 - 2197218 + | IS1 ORF1 insB 2197263 - 2197640 + | IS1 ORF2 TERM 2709 2197948 - 2197929 - T 100 -10 -4.98531 | opp_overlap 2197928 CTCTTAAATTAAAAA GCCGCCAT GGGG ATAGCGGC CATGTTTATTACCTG yehD 2198510 - 2197986 - | putative fimbrial-like protein TERM 2710 2198770 - 2198741 - R 100 -15.3 -5.5353 | opp_overlap 2198748 GATATCAATAAAAAA GACGAAATCATTT ATAT AAATGATTTCGTC GGTAATGACTCCAAC insB 2199181 - 2198786 - | IS1 ORF2 insA 2199483 - 2199208 - | IS1 ORF1 TERM 2711 2200093 - 2200061 - R 80 -6.3 -4.85782 | TGCGGCAAAAACAAA TACACCGCATCAATA TAA CATCTCTGCGGTGTA TGAAGAATAACCAGA mrp 2201232 - 2200123 - | putative ATPase TERM 2712 2201731 - 2201714 - g 93 -8.5 -4.86731 | TCGCCTGAAAGAAAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 2713 2201776 - 2201763 - g 70 -3.8 -4.60487 | opp_overlap 2201768 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTGAA TERM 2714 2202405 - 2202393 - g 76 -9.1 -3.73775 | opp_overlap 2202389 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG metG 2201364 - 2203397 + | methionyl-tRNA synthetase TERM 2715 2203409 - 2203428 + F 100 -10.7 -5.01553 | ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT SF2181 2203793 - 2204095 + | IS600 ORF1 SF2182 2204131 - 2204949 + | IS600 ORF2 insA 2205607 - 2205882 + | IS1 ORF1 insB 2205909 - 2206304 + | IS1 ORF2 TERM 2716 2206903 - 2206872 - f 100 -13.7 -3.84961 | GATCGAATGACGAAA GCCTGCGCTGCGT TCCCAC ACGCAGCACTGGC AGCACTGGCGGAACT TERM 2717 2207492 - 2207482 - f 72 -5.4 -4.40993 | opp_overlap 2207476, overlap 2207476 GAGAAAGCAGTAAAA GCAT GGA ATGC CCTTACTCTATCTCC TERM 2718 2210485 - 2210472 - f 79 -4.5 -5.10767 | CATCGAAGACAAAAA GCTGC CTGC ACAGC AAAAAGCTCGAGATG TERM 2719 2211785 - 2211809 + F 71 -7.1 -4.19258 | opp_overlap 2211784 2211800, overlap 2211786 AACAACTGAAAACGT TCTGCCAGC CACAAAC GCTGGCAGC TTTTGCCTGGGATCT TERM 2720 2211786 - 2211808 + F 73 -10.6 -3.11073 | opp_overlap 2211784 2211800, overlap 2211785 ACAACTGAAAACGTT CTGCCAGC CACAAAC GCTGGCAG CTTTTGCCTGGGATC TERM 2721 2213060 - 2213037 - f 84 -8.1 -4.72007 | opp_overlap 2213038, overlap 2213038 TTCCATTAAAACAAA GCGGGCAGT GATGCG ACTGCCCGT TATCTACACGACTTA TERM 2722 2213038 - 2213059 + F 86 -11.6 -3.48772 | opp_overlap 2213037 2213038 TCCATTAAAACAAAG CGGGCAGT GATGCG ACTGCCCG TTATCTACACGACTT TERM 2723 2213059 - 2213038 - f 82 -11.6 -3.42481 | opp_overlap 2213038, overlap 2213037 TCCATTAAAACAAAG CGGGCAGT GATGCG ACTGCCCG TTATCTACACGACTT TERM 2724 2213449 - 2213423 - g 74 -10.3 -3.51633 | opp_overlap 2213411 2213408, overlap 2213403 2213401 ATATACTCTAGATAA TTCAAGTCGCA GCACA TGCAACTTGAA GTATGACGAGTATAG SF2187 2213091 - 2213498 + | hypothetical protein TERM 2725 2213494 - 2213476 - f 74 -11 -2.84229 | opp_overlap 2213476, overlap 2213475 ATAGCTTTATTAAAG GGGGGAAC GGT ATTCCCCC TTAGATGCGTTTCAA TERM 2726 2213476 - 2213494 + F 73 -10.3 -3.11732 | opp_overlap 2213475 2213476 ATAGCTTTATTAAAG GGGGGAA CGGTA TTCCCCC TTAGATGCGTTTCAA TERM 2727 2213892 - 2213934 + F 72 -10.2 -2.90725 | opp_overlap 2213890 2213892, overlap 2213885 2213897 2213906 TTAGGCCTGAAAATA GTAAATAAAAGAACCTGC CTCACCA GCAGTTTTTTTTATTTAC TGTGATCTGCTTTCC TERM 2728 2213906 - 2213920 + F 100 -2.8 -6.25578 | opp_overlap 2213892 2213890, overlap 2213897 2213892 2213885 AGTAAATAAAAGAAC CTGC CTCACCA GCAG TTTTTTTTATTTACT yehL 2213974 - 2215128 + | hypothetical protein yehM 2215139 - 2217418 + | hypothetical protein yehP 2217411 - 2218547 + | hypothetical protein TERM 2729 2218592 - 2218611 + G 70 -4.2 -4.63218 | opp_overlap 2218578 2218575 2218574, overlap 2218593 ACACCGCAGGCACTG ACGGCGTT AAGC AATGCCGG TTTTGTTAAGCGCAG TERM 2730 2219317 - 2219303 - g 77 -11.4 -3.14211 | AGCCGCGCGCAGCAA GCAGCG GAA CGCTGC AGCTGGCGATGGGTG TERM 2731 2220150 - 2220162 + G 75 -5.5 -4.71426 | CCGTGTGTCTGGTTT CTGGC TTT GTCAG TTTTGTTGATGGGCA TERM 2732 2220407 - 2220420 + G 75 -4.5 -4.85599 | opp_overlap 2220406, overlap 2220406 TTGCTGGCGAATGAC CTCAC CGCG GTGGG TTTTTATCGGCTGGC yehQ 2218544 - 2220547 + | hypothetical protein TERM 2733 2220626 - 2220642 + T 77 -10.9 -3.22298 | opp_overlap 2220622 TATCCTATATAGCCC CTGGTGA GAG TCACCAG TTGGTAATGACTCCA insB 2221153 - 2220680 - | IS1 ORF2 TERM 2734 2221557 - 2221531 - g 76 -8 -4.29073 | GAAGAATCGAAGAAA TTCAGCGCCAAT CTG AACGGCACTGAA ATTGCCATTACCTAT yehR 2221438 - 2221899 + | hypothetical protein insB 2222515 - 2222120 - | IS1 ORF2 insA 2222817 - 2222542 - | IS1 ORF1 yehS 2223243 - 2222851 - | hypothetical protein yehT 2223952 - 2223233 - | putative two-component response-regulatory protein YehT yehU 2225634 - 2223949 - | putative 2-component sensor protein TERM 2735 2224597 - 2224615 + g 70 -5.8 -4.18488 | AAGCAGTTGCGCAAT CCCCTCGC CCA GCGTGCGG TTTATTGAACTGAAT TERM 2736 2225852 - 2225827 - H 72 -9.1 -3.61398 | opp_overlap 2225827 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 2737 2225827 - 2225852 + H 100 -9.8 -5.61596 | opp_overlap 2225827 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 2738 2227198 - 2227169 - H 89 -9.3 -4.59109 | overlap 2227171 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACCCTATAGATGCA TERM 2739 2227196 - 2227171 - H 100 -16.3 -3.90762 | overlap 2227169 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACCCTATAGATG TERM 2740 2227394 - 2227378 - H 72 -5.1 -4.62302 | overlap 2227380 CAACATTTTTAAAAA TCGACGA AGA TCGTCCA GGAGCGCCGTTTTTC SF2200 2227585 - 2227833 + | DNA-damage-inducible protein TERM 2741 2227902 - 2227934 + F 100 -8.4 -5.63236 | gap 1, opp_overlap 2227848 2227902 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT SF2201 2228275 - 2228943 + | hypothetical protein TERM 2742 2228983 - 2228951 - f 86 -13.6 -3.16564 | gap 1, opp_overlap 2228951 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT TERM 2743 2228951 - 2228983 + F 89 -11.4 -4.08919 | gap 1, opp_overlap 2228951 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT SF2203 2229979 - 2231187 + | iso-IS10R ORF TERM 2744 2232281 - 2232306 + T 72 -10.3 -2.80784 | opp_overlap 2232282 2232283, overlap 2232278 ACTGACTCCGGAAAA ACGGAGGCCCG CCCC CGGGCCTCCCC TGATTCATCCGTTTC TERM 2745 2232305 - 2232282 - T 100 -13.8 -4.58395 | opp_overlap 2232281 2232278, overlap 2232283 CTGACTCCGGAAAAA CGGAGGCCCG CCCC CGGGCCTCCC CTGATTCATCCGTTT TERM 2746 2232304 - 2232283 - T 100 -17.3 -3.34716 | opp_overlap 2232281 2232278, overlap 2232282 TGACTCCGGAAAAAC GGAGGCCCG CCCC CGGGCCTCC CCTGATTCATCCGTT SF2204 2232797 - 2232420 - | hypothetical protein SF2205 2234263 - 2232974 - | putative tail fiber protein TERM 2747 2234305 - 2234287 - R 73 -7.4 -4.13995 | overlap 2234290 TCGCGATAAATTAAA TCAGGAAG AAC CTTCCGGA GAGGCGGGCCATTCA SF2206 2234775 - 2234287 - | putative tail fiber assembly protein SF2207 2235248 - 2234835 - | hypothetical protein insA 2235290 - 2235565 + | IS1 ORF1 insB 2235592 - 2235987 + | IS1 ORF2 TERM 2748 2236011 - 2236024 + F 89 -6.7 -5.3104 | CATTACCGAAGTACT GTGCA TAAA TGCAC TTTTGTTTTTAGTCC SF2211 2236686 - 2237012 + | IS629 ORF1 TERM 2749 2237328 - 2237316 - g 70 -4.8 -4.56597 | overlap 2237318 TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCGGCCGGAAAGCC SF2212 2237227 - 2237895 + | IS629 ORF2 yehW 2239272 - 2238541 - | putative transport system permease protein TERM 2750 2238964 - 2238940 - G 72 -8.5 -3.83026 | TGGTTGCAGACCAAA GCCGATCACCG GAA CGGCAATCGCC AGCACTGCGACAGGC yehX 2240203 - 2239277 - | putative ATP-binding component of a transport system yehY 2241353 - 2240196 - | putative transport system permease protein TERM 2751 2240744 - 2240720 - G 90 -4.9 -5.39721 | TGAGCAGAGAAAAAA TTGCCCCCTGC CGC GCAGTGGAAAA GTAGCACCAGATGCC TERM 2752 2241180 - 2241166 - G 70 -5.6 -4.37886 | overlap 2241142 2241168 TTAGCGGGGACAAAA CAGGCT GTC AGCCAG GCGCAACCAACGCCC TERM 2753 2241292 - 2241282 - G 74 -8.2 -3.97368 | overlap 2241283 CGCGTAACTGATAAA CGGC AGC GCCG CTGCGATTGCCGTCA yehZ 2242277 - 2241360 - | putative transport system permease protein TERM 2754 2241437 - 2241454 + g 70 -3.5 -4.65895 | gap 1, overlap 2241433 CCACTGCAATGCTGG CATT-CAG TTG CTGCAATG TTTTTGCATCGAGGC TERM 2755 2241935 - 2241948 + g 73 -3.8 -4.84529 | overlap 2241927 AGATTAACTTGTTGT GCTC CGCATC GAGC TTTTTGACTTTCTCG TERM 2756 2242499 - 2242517 + r 74 -10.2 -3.15579 | opp_overlap 2242499 TGAACATCAGGCAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC TERM 2757 2242517 - 2242499 - R 93 -12.4 -3.71607 | opp_overlap 2242499 TGAACATCAGGCAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC bglX 2244826 - 2242529 - | beta-D-glucoside glucohydrolase TERM 2758 2242677 - 2242695 + g 75 -6.6 -4.37658 | CTGACAGTCTGAGTT TCGCCCGG TTT CAGGGTGA TTTTCTCAAAGCCTT TERM 2759 2245755 - 2245768 + G 70 -6.7 -4.01703 | opp_overlap 2245754, overlap 2245754 CCGCACGTTATAACG CCGAT CCGG ATCGG TTATTTGAATCTTCT dld 2245022 - 2246737 + | D-lactate dehydrogenase TERM 2760 2246769 - 2246741 - T 84 -7.6 -4.74801 | gap 2, opp_overlap 2246742, overlap 2246742 2246744 GAAGTGGAGTAAAAA TTACGGATGGCAGA GTA TC-GCCATCCG-AA TTCACTTAATCGTTC TERM 2761 2246769 - 2246742 - T 70 -9.2 -3.44158 | gap 1, opp_overlap 2246742, overlap 2246741 2246744 AAGTGGAGTAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGAA TTCACTTAATCGTTC TERM 2762 2246767 - 2246744 - T 79 -11.8 -3.28472 | gap 1, opp_overlap 2246742, overlap 2246741 2246742 GTGGAGTAAAAATTA CGGATGGCAGA GTA TC-GCCATCCG AATTCACTTAATCGT pbpG 2247716 - 2246775 - | D-alanyl-D-alanine endopeptidase TERM 2763 2246803 - 2246819 + g 100 -10.8 -5.8096 | overlap 2246787 GCCGTCTGCCCCGCC GCCGCC ATTTG GGCGGC TTTTTGTTTTTTATA TERM 2764 2247320 - 2247330 + g 81 -8.2 -4.3739 | opp_overlap 2247305, overlap 2247309 GGTGCGCAAGGCTTG CCGC CGC GCGG TTTTCTGAAGACATC TERM 2765 2247868 - 2247833 - R 86 -11.2 -3.75015 | overlap 2247834 AGAATCGTGAGTAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAACG TCAAAGAACTTTCTA TERM 2766 2247867 - 2247834 - R 87 -14.7 -2.84527 | overlap 2247833 GAATCGTGAGTAAAT GCTGCATTGCTGACA TTTA CGCCAGCAATGCAAC GTCAAAGAACTTTCT yohC 2248468 - 2247881 - | hypothetical protein yohD 2248602 - 2249216 + | hypothetical protein TERM 2767 2249212 - 2249198 - T 80 -5.6 -5.06414 | GCGCGGGAAGAAAAA GCCGGA TAA TCAGGC GTAAAGCAGTTGCCA SF2223 2251250 - 2250147 - | putative enzyme TERM 2768 2250233 - 2250219 - G 73 -9.2 -3.61398 | CTGCCCTTGCAATAA CAGGCC ATT GGCCCG CTCACGCAGCGCCGG TERM 2769 2250636 - 2250621 - G 70 -4.6 -4.46926 | GATGTCAGGATAAAA TGCCGC TTTT GCCGCA TCAATAGTGCTTAAC SF2224 2251673 - 2251317 - | hypothetical protein TERM 2770 2252035 - 2251996 - R 83 -14.2 -2.71364 | overlap 2251984 TCACTGGCGCAAGGA GCGCGCAGGGGGCGAC CAATCGCC GCCGCCCCCTGCCCCC CCGGGCTCTGGCGAA yohI 2253208 - 2252261 - | tRNA-dihydrouridine synthase C TERM 2771 2253249 - 2253228 - H 100 -8.1 -5.42259 | gap 1, opp_overlap 2253231, overlap 2253229 2253231 TCACCCGCAAAAAAA TGAGGCGCTA TGT TAGCGCCT-A TGGTCAGCGGATTAA TERM 2772 2253249 - 2253229 - H 80 -9.7 -3.84633 | opp_overlap 2253231, overlap 2253228 2253231 CACCCGCAAAAAAAT GAGGCGCTA TGT TAGCGCCTA TGGTCAGCGGATTAA TERM 2773 2253231 - 2253247 + H 79 -12.3 -2.78715 | opp_overlap 2253231 2253228 2253229 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAGCGGATT TERM 2774 2253247 - 2253231 - H 88 -12.3 -3.49966 | opp_overlap 2253231, overlap 2253228 2253229 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAGCGGATT TERM 2775 2253271 - 2253310 + H 73 -9.5 -3.32993 | gap 2, opp_overlap 2253276, overlap 2253276 2253278 GCGGATTAAAGGTCT GCA-A-AGAGGGATTGCTG CAAA CTGCAATCCCTCTCTATGC TTGATGTATGCCTGA TERM 2776 2253303 - 2253276 - H 93 -14.2 -3.56594 | opp_overlap 2253271 2253276 2253278 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 2777 2253276 - 2253303 + H 85 -14.2 -3.0281 | opp_overlap 2253276, overlap 2253271 2253278 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 2778 2253278 - 2253301 + H 75 -11 -3.06361 | opp_overlap 2253276, overlap 2253276 2253271 AAAGGTCTGCAAAGA GGGATTGCTG CAAA CTGCAATCCC TCTCTATGCTTGATG TERM 2779 2253503 - 2253522 + G 90 -9.3 -4.4959 | TTTCGTCCTGATTTA TGCCTGC CTGTAT GCAGGCA TTTTCATTGCTTCCC yohJ 2253447 - 2253845 + | hypothetical protein yohK 2253842 - 2254537 + | hypothetical protein cdd 2254667 - 2255551 + | cytidine deaminase TERM 2780 2255619 - 2255635 + F 89 -10.9 -4.15044 | TGGTGTCGAAATTCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC TERM 2781 2256292 - 2256302 + G 79 -4.6 -5.00884 | opp_overlap 2256292 CTTTATATTTTTAAA CGTG AAC CGCG TTTTTTAGGGCCGCT sanA 2255701 - 2256420 + | hypothetical protein TERM 2782 2256553 - 2256536 - g 75 -5.5 -4.60924 | opp_overlap 2256538, overlap 2256538 TAAACGGGTTAAAAA TGCACCG GAAC CGGTGTA TGTCTGGCGAGCAAA SF2230 2256423 - 2256662 + | hypothetical protein TERM 2783 2257153 - 2257163 + G 85 -6.8 -4.76123 | overlap 2257112 CCCATTGATATCGGC CGCT TAC AGCG TTTTGTTACTGATTT TERM 2784 2257755 - 2257771 + G 85 -11.5 -3.68827 | AAAAGAGTTTGCCAG CGCCCGG GAG CTGGGCG TTTCGATCATCGATG SF2231 2256856 - 2258094 + | putative oxidoreductase TERM 2785 2258686 - 2258675 - T 72 -5.8 -4.54821 | opp_overlap 2258675, overlap 2258658 ATCTTAATCAGAAAA TCGG TATG CCGA TCGTTAACGGTAAAT mglC 2260313 - 2259303 - | beta-methylgalactoside transporter inner membrane component TERM 2786 2260338 - 2260375 + r 91 -8.5 -4.96848 | opp_overlap 2260342 2260344 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGTTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2261849 - 2260329 - | galactose/methyl galaxtoside transporter ATP-binding protein TERM 2787 2261209 - 2261224 + g 78 -7.6 -4.38154 | opp_overlap 2261209 2261208 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGCGAGATAT TERM 2788 2261901 - 2261879 - R 100 -14.9 -3.88232 | opp_overlap 2261892, overlap 2261892 TTGGCCATACAATAA GGGCGCAGT AAACG ACTGCGCCC AATCAGTCTTATTTC mglB 2262908 - 2261910 - | galactose-binding transport protein; receptor for galactose taxis TERM 2789 2262011 - 2262027 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAGATCA galS 2264228 - 2263188 - | DNA-binding transcriptional regulator GalS yeiB 2265446 - 2264370 - | hypothetical protein TERM 2790 2265349 - 2265379 + g 71 -9.1 -3.44848 | gap 1, opp_overlap 2265352 2265353, overlap 2265347 2265353 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAGC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 2791 2265376 - 2265352 - G 78 -10.8 -3.51924 | gap 1, opp_overlap 2265349 2265347 2265353, overlap 2265353 GCGGGATTGAGATAA GCCGCCTTTGG TAGC CCAAAGGCG-C TGATGTTTAATAGCA TERM 2792 2265376 - 2265353 - G 70 -11 -2.7094 | opp_overlap 2265349 2265347 2265353, overlap 2265352 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA TERM 2793 2265353 - 2265376 + g 71 -11 -2.87501 | opp_overlap 2265352 2265353, overlap 2265349 2265347 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA folE 2266131 - 2265463 - | GTP cyclohydrolase I TERM 2794 2267234 - 2267249 + r 76 -11.8 -2.56271 | opp_overlap 2267230 2267231, overlap 2267233 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA TERM 2795 2267439 - 2267453 + r 77 -9.2 -3.87373 | CGGTGTTTTAGCCGT CGCGCT GTC GGCGCG TTTCTGCCCGGTATA TERM 2796 2269520 - 2269501 - R 100 -13.6 -4.75776 | AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA lysP 2271011 - 2269542 - | lysine transporter TERM 2797 2270439 - 2270404 - G 70 -6.8 -4.08945 | gap 1, opp_overlap 2270414 2270415, overlap 2270415 ATCATCGCCGCAAAA CCACCAG-CAAACGGCG CTT CGCCGATTGTCCAGTTG CTCCAGCCCGCAGGC TERM 2798 2270427 - 2270415 - G 84 -10.5 -3.83705 | opp_overlap 2270414 2270415, overlap 2270404 AAAACCACCAGCAAA CGGCG CTT CGCCG ATTGTCCAGTTGCTC yeiE 2272098 - 2271217 - | putative DNA-binding transcriptional regulator TERM 2799 2272894 - 2272868 - g 75 -6.6 -4.42386 | CCCGGATGCAGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 2800 2273166 - 2273148 - g 71 -2.2 -5.00884 | AGCGCGCTGAAAAAA GCTGGGGC GAA ACCTCTGC TGATGGCACTGGTAC yeiH 2272197 - 2273246 + | hypothetical protein nfo 2273320 - 2274177 + | endonuclease IV TERM 2801 2274581 - 2274565 - g 82 -9.3 -4.15044 | opp_overlap 2274563 2274570 2274573 TGCTCCTGGAAGAAA CGCGCCG TGC CGGCGTG AATGTCTCCGGCTGC yeiI 2274180 - 2275268 + | hypothetical protein yeiJ 2276574 - 2275324 - | putative transport system permease protein TERM 2802 2275948 - 2275933 - G 78 -9 -3.9122 | overlap 2275920 CAGGCGGGCAAACAA GATCCC GCCA GGGATC GCCATTAACGATGCC TERM 2803 2276069 - 2276105 + g 72 -7.3 -4.19735 | AATAATTCATTGCGA TTCAGACGATCGATAAA GGG TTTGACGATCGCCGGAA TTTCGTTTTGCCCGA TERM 2804 2276386 - 2276400 + g 71 -2.7 -4.82901 | overlap 2276376 CGCCATCACTTTGTG GACGC CAAAA GCGAC TTTTTCTGCGACCCA TERM 2805 2276662 - 2276627 - R 80 -9.6 -3.96148 | opp_overlap 2276629, overlap 2276629 TCTGCCCATCAGAAA TAGCCGGGCCTGCATC TTGC GATACTGTCCCGGCTT GTTATCAACACTTAA TERM 2806 2276629 - 2276660 + r 79 -10 -3.79678 | opp_overlap 2276627 2276629 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT TERM 2807 2276660 - 2276629 - R 88 -12.2 -3.57406 | opp_overlap 2276629, overlap 2276627 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT rihB 2277615 - 2276674 - | ribonucleoside hydrolase 2 TERM 2808 2276728 - 2276751 + g 90 -11.8 -3.92324 | opp_overlap 2276725 2276728 TAAGCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTGGTATTAGCGGG TERM 2809 2277823 - 2277849 + G 71 -2.1 -5.02074 | opp_overlap 2277823, overlap 2277828 TTGCTTTTCAACGGA TGTTTCAGCCG ATACG CGGCTGTTTCA TTTTTTAGCGCGTGA TERM 2810 2277828 - 2277844 + G 86 -9.4 -4.42765 | opp_overlap 2277823, overlap 2277823 TTTCAACGGATGTTT CAGCCG ATACG CGGCTG TTTCATTTTTTAGCG TERM 2811 2277887 - 2277901 + G 82 -7.8 -4.52589 | GTGCAGGAAGGGCAA CAGCCG TCA TGGCTG TTTTATCTGACGCGA yeiL 2277785 - 2278363 + | DNA-binding transcriptional activator YeiL yeiM 2279761 - 2278511 - | putative transport system permease protein TERM 2812 2279251 - 2279297 + g 83 -10.2 -4.07568 | overlap 2279254 CGGTAAACAACTCGT TGCGATTCACGCGATCGATAAA CGG TTTAACGATCGCCGGGATCTCA TTTTGCCCGAGGAAA TERM 2813 2279254 - 2279294 + g 72 -10.5 -3.08032 | overlap 2279251 TAAACAACTCGTTGC GATTCACGCGATCGATAAA CGG TTTAACGATCGCCGGGATC TCATTTTGCCCGAGG TERM 2814 2279749 - 2279766 + g 70 -5.7 -4.30014 | TCCCCACAACACTTC TCATTAT ATCC ATAATGA TTTTCCCTTCATGCC TERM 2815 2279805 - 2279788 - R 83 -10.5 -3.74693 | opp_overlap 2279788 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA TERM 2816 2279788 - 2279805 + r 81 -8.3 -4.39287 | opp_overlap 2279788 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA yeiN 2280793 - 2279855 - | hypothetical protein TERM 2817 2279894 - 2279906 + g 73 -9.1 -3.61398 | opp_overlap 2279902, overlap 2279896 TTTGGCAATTTCACT CGCCA GAA TGGCG TTGTTGAACACCAGC TERM 2818 2280460 - 2280470 + g 74 -3.2 -5.00616 | TCGTTGAAGCCACAG TGGT TGC GCCA TTTTTTCCGGCGGCA yeiC 2281722 - 2280781 - | hypothetical protein TERM 2819 2281549 - 2281576 + g 72 -6.2 -4.42619 | opp_overlap 2281529 TACGGCGCTCAGTAG CCAGGCTTTGTT ACCC AGCAACGCCAGG TTTTGTGCAATATTG TERM 2820 2281988 - 2281969 - R 100 -9.3 -5.28683 | AGGAACACTAAAAAA GGGCAGA AAATAA TCTGCCC TTGAGGAAATAACCT TERM 2821 2282100 - 2282140 + r 78 -6.1 -4.66318 | opp_overlap 2282104, overlap 2282101 2282102 TCTCTTTGCGCTCAT CAAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACACC TTTTATTACGCTGCT TERM 2822 2282101 - 2282139 + r 73 -9.6 -3.39068 | opp_overlap 2282104, overlap 2282100 2282102 CTCTTTGCGCTCATC AAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACAC CTTTTATTACGCTGC TERM 2823 2282102 - 2282138 + r 81 -13.1 -2.62958 | opp_overlap 2282104, overlap 2282101 2282100 TCTTTGCGCTCATCA AATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACA CCTTTTATTACGCTG TERM 2824 2282136 - 2282104 - R 100 -17.9 -3.72576 | opp_overlap 2282102 2282101 2282100 TTTGCGCTCATCAAA TGTTACAGGGCAGGA AAT TTCTGCCCTGTAACA CACCTTTTATTACGC fruA 2283837 - 2282146 - | fructose-specific PTS system IIBC component fruK 2284792 - 2283854 - | 1-phosphofructokinase fruB 2285922 - 2284792 - | bifunctional fructose-specific PTS IIA/HPr protein yeiO 2286290 - 2287468 + | putative transport insB 2287857 - 2287462 - | IS1 ORF2 insA 2288159 - 2287884 - | IS1 ORF1 TERM 2825 2288477 - 2288458 - H 71 -10 -3.27525 | gap 1, overlap 2288453 2288472 GGGCTGGAAATTGAA GGGGCAGTG CAA CAC-GCCCC GCAACCCGGACGGCA yeiP 2288653 - 2289225 + | elongation factor P TERM 2826 2289246 - 2289265 + F 100 -10 -5.46129 | opp_overlap 2289246 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA TERM 2827 2289265 - 2289246 - f 79 -7.8 -4.42386 | opp_overlap 2289246 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA yeiQ 2289448 - 2290914 + | putative oxidoreductase TERM 2828 2290925 - 2290963 + F 76 -8.1 -4.03183 | opp_overlap 2290932 TTTAACGATTTCTGC GGTTAAAGCGGATGAAG CTCAC CTTCGTCCGCTCTCCCC TTCTCTTTTCTGCCT TERM 2829 2290956 - 2290932 - f 75 -10 -3.53091 | opp_overlap 2290925 ATTTCTGCGGTTAAA GCGGATGAAG CTCAC CTTCGTCCGC TCTCCCCTTCTCTTT yeiR 2291032 - 2292018 + | hypothetical protein TERM 2830 2292078 - 2292068 - g 73 -4 -4.81734 | opp_overlap 2292068 AAATATGATTAAAAA TTTG CCG CAAA TAGTGTTGTTGAATA TERM 2831 2292318 - 2292308 - g 75 -4.6 -4.86731 | CTGGCTGAAAGAAAA CGCC CCT GGCA GACGACGTATCGTGA SF2261 2292057 - 2292770 + | hypothetical protein TERM 2832 2293119 - 2293130 + F 79 -2.2 -5.61596 | AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT TERM 2833 2293658 - 2293671 + G 70 -6.7 -4.08557 | overlap 2293657 GTTTGTCCATGCTTC CACCA GCAG TGGTG TTATTATTTCCAGCA spr 2293182 - 2293748 + | putative outer membrane lipoprotein TERM 2834 2293815 - 2293798 - f 86 -11.3 -3.77219 | opp_overlap 2293798 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 2835 2293798 - 2293815 + F 100 -11.3 -5.85244 | opp_overlap 2293798 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 2836 2294633 - 2294645 + G 70 -4.1 -4.72272 | CTGGACATGGAACGA TGTGT GGT ACGCA TTTTTACTGGGCGGC TERM 2837 2295211 - 2295229 + G 71 -9.6 -3.50447 | overlap 2295199 2295223 GCGCGCTTATCTATC TTGAGCGT TTT ACGCTCGA TTATCTGAAAATTGA rtn 2293929 - 2295485 + | hypothetical protein TERM 2838 2296462 - 2296443 - g 79 -2.2 -5.25803 | gap 1, overlap 2296445 2296447 AATTTCGATAAAAAA TACATCATC AAA GATGA-GCA AAAGAACGAATCAGC TERM 2839 2296601 - 2296583 - g 100 -13.2 -3.75105 | TGAATGGATGAACAA GGCGTTGT TTT ACAACGCC TGGAGTCGCACGAAC yejA 2295567 - 2297381 + | hypothetical protein TERM 2840 2298227 - 2298272 + G 80 -5.3 -5.02074 | overlap 2298240 TATGTTCCGCAACGC CATGCTGCTGGTGATTGCCGG TTTT CCGGCGACGTTTATCAGCATG TTTTTTACCGGCTCG yejB 2297382 - 2298476 + | putative transport system permease protein TERM 2841 2299341 - 2299361 + G 70 -11.2 -2.73875 | overlap 2299338 TCGGTCTACCGCTCG GTTCACCG TCACT CGGTGAAC TGCTGTTACAAGGGA yejE 2298476 - 2299501 + | putative transport system permease protein yejF 2299503 - 2301092 + | putative ATP-binding component of a transport system yejG 2301440 - 2301096 - | hypothetical protein bcr 2302963 - 2301773 - | bicyclomycin/multidrug efflux system rsuA 2303686 - 2302991 - | 16S rRNA pseudouridylate synthase A yejH 2303836 - 2305596 + | putative ATP-dependent helicase rplY 2305721 - 2306005 + | 50S ribosomal protein L25 TERM 2842 2306021 - 2306050 + T 93 -15.9 -2.90219 | opp_overlap 2306028, overlap 2306028 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCG GCGGGGTTTTTTG TATCTGCAGATTATG TERM 2843 2306028 - 2306043 + T 100 -11.8 -5.4251 | opp_overlap 2306028, overlap 2306021 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTATCTGCA TERM 2844 2306043 - 2306028 - T 100 -11.8 -5.06103 | opp_overlap 2306028 2306021 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTATCTGCA yejK 2307151 - 2306144 - | nucleoid-associated protein NdpA TERM 2845 2307293 - 2307282 - H 100 -5.8 -6.04378 | opp_overlap 2307282 2307292 AAAGCAGAAAAAAAA CCGT TGCT ACGG TAATATGTTGCCCTT yejL 2307333 - 2307560 + | hypothetical protein TERM 2846 2307978 - 2308012 + G 81 -6.5 -4.78572 | gap 1, overlap 2307981 AAATGAGATGGCGCG CGACTGGCA-GCTGAT GTTC ATCAGCGTGCCGGTTA TTTTATTGCTTGAAC TERM 2847 2307981 - 2308009 + G 93 -10.4 -4.48997 | gap 1, overlap 2307978 TGAGATGGCGCGCGA CTGGCA-GCTGAT GTTC ATCAGCGTGCCGG TTATTTTATTGCTTG TERM 2848 2308417 - 2308430 + G 76 -8.1 -4.25104 | opp_overlap 2308410 2308415, overlap 2308429 TTCGAGAAGCAGATG CCTGC GCTG GCAGG TTTTGCTGAGCAAAA yejM 2307580 - 2309340 + | putative sulfatase TERM 2849 2309326 - 2309366 + T 71 -9.9 -3.24825 | opp_overlap 2309323, overlap 2309324 2309328 ACAGACGAGAAGCGT TTTATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAATA TCTTACTTGCAATCG TERM 2850 2309328 - 2309364 + T 81 -12.5 -3.18634 | opp_overlap 2309323, overlap 2309326 2309324 AGACGAGAAGCGTTT TATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAA TATCTTACTTGCAAT TERM 2851 2309510 - 2309526 + T 100 -8 -5.76633 | opp_overlap 2309510, overlap 2309502 AATCCCAAGAAAAAA CCAACC CTTAC GGTTGG TTTTTTTATATCTGC TERM 2852 2309526 - 2309510 - T 100 -8 -5.4756 | opp_overlap 2309510 2309502 AATCCCAAGAAAAAA CCAACC CTTAC GGTTGG TTTTTTTATATCTGC yejO 2312100 - 2309590 - | putative ATP-binding component of a transport system TERM 2853 2310329 - 2310356 + g 70 -9.8 -3.23853 | overlap 2310327 TGCTCAAAACCAGCT CCCGCATCAGTG GTCA CGTTGTTGCGGG TGTTAATTGCCGAAC narP 2312501 - 2313148 + | transcriptional regulator NarP TERM 2854 2313178 - 2313152 - T 91 -8 -5.18726 | opp_overlap 2313150, overlap 2313154 GGGGCACAATAAAAA TAGCCCGATG GATTTAT CATCGGGCTG AGATTTATGACAAAC TERM 2855 2313176 - 2313154 - T 90 -10.6 -4.22377 | opp_overlap 2313150, overlap 2313152 GGCACAATAAAAATA GCCCGATG GATTTAT CATCGGGC TGAGATTTATGACAA TERM 2856 2313328 - 2313355 + T 89 -6.3 -5.35815 | gap 1, overlap 2313329 2313330 ACTTTGTCATCAGTC TA-GCCCGATGG CATCA CCATCGGGCCTC TTTTTATTTACTCTC TERM 2857 2313329 - 2313353 + T 91 -11.4 -4.29436 | overlap 2313328 2313330 CTTTGTCATCAGTCT AGCCCGATGG CATCA CCATCGGGCC TCTTTTTATTTACTC TERM 2858 2313330 - 2313352 + T 90 -14.9 -3.16035 | overlap 2313329 2313328 TTTGTCATCAGTCTA GCCCGATGG CATCA CCATCGGGC CTCTTTTTATTTACT ccmH 2314411 - 2313359 - | subunit of heme lyase TERM 2859 2314418 - 2314406 - G 77 -3.3 -5.07486 | CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT dsbE 2314965 - 2314408 - | disulfide oxidoreductase ccmF 2316905 - 2314962 - | cytochrome c-type biogenesis protein TERM 2860 2315424 - 2315400 - G 71 -9.3 -3.54638 | ATAATTCTGGCTAAA GGCAATGCCAA CAA TTGTCACTGCC AGCCCCAGGTGAGCC ccmE 2317381 - 2316902 - | cytochrome c-type biogenesis protein CcmE ccmD 2317587 - 2317378 - | heme exporter protein C TERM 2861 2317545 - 2317534 - G 95 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2318321 - 2317584 - | heme exporter protein C TERM 2862 2317741 - 2317706 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2317706 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2319025 - 2318363 - | heme exporter protein B, cytochrome c-type biogenesis protein TERM 2863 2318494 - 2318478 - G 81 -10.8 -3.57797 | GGCAAATGCATAGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG ccmA 2319645 - 2319022 - | cytochrome c biogenesis protein CcmA napC 2320260 - 2319658 - | cytochrome c-type protein NapC TERM 2864 2320084 - 2320110 + g 81 -6.6 -4.66163 | GCGCATTTCGTGGCA GCTAATGCAGAA CTC TTCGGTATTGGC TTTTTCCATCCCGGT napB 2320719 - 2320270 - | diheme cytochrome c550 TERM 2865 2320384 - 2320361 - G 70 -5.9 -4.18674 | overlap 2320362 TGCAGACAGAAATAA CGACGCGGA GCCACT TCCGCGCCC ACTTTGCCGTCGCTG napH 2321579 - 2320716 - | quinol dehydrogenase membrane component TERM 2866 2321052 - 2321028 - G 86 -3.5 -5.35815 | overlap 2321042 TAGATCAAATAAAAA CAGCGCG AGAATAAGCAG CGCGCCG CTGCCGAAGCCCATT TERM 2867 2321056 - 2321042 - G 88 -11.4 -3.80174 | overlap 2321028 ACAGCGCGAGAATAA GCAGCG CGC CGCTGC CGAAGCCCATTACCA napG 2322261 - 2321566 - | quinol dehydrogenase periplasmic component TERM 2868 2322123 - 2322154 + g 81 -12.4 -3.21276 | gap 1, overlap 2322127 TGGCTCCGGGCGGGC GCAA-CCGCACGC CAGATGC GCGTGCGGTTTGC TGTTGTAACCCCAGC TERM 2869 2322127 - 2322149 + g 90 -12 -3.97088 | overlap 2322123 TCCGGGCGGGCGCAA CCGCACGC CAGATGC GCGTGCGG TTTGCTGTTGTAACC napA 2324754 - 2322268 - | nitrate reductase napD 2325014 - 2324751 - | assembly protein for periplasmic nitrate reductase napF 2325498 - 2325004 - | ferredoxin-type protein TERM 2870 2325641 - 2325631 - H 71 -6.8 -4.08767 | CCGATCGGGGTAAAA CCTG TAG CAGG ATCAAAAGAGTGGCG eco 2325906 - 2326394 + | ecotin precursor TERM 2871 2327772 - 2327742 - T 80 -9.6 -3.92641 | overlap 2327743 2327746 AACGGTATTGATAAA TGAACGCGGAGTAC GCA GCACGCCGCGCTCG ACCTGGTGCGCCCAG TERM 2872 2327771 - 2327743 - T 82 -13.1 -2.95102 | overlap 2327742 2327746 ACGGTATTGATAAAT GAACGCGGAGTAC GCA GCACGCCGCGCTC GACCTGGTGCGCCCA TERM 2873 2327768 - 2327746 - T 82 -11.2 -3.61988 | overlap 2327743 2327742 GTATTGATAAATGAA CGCGGAGTAC GCA GCACGCCGCG CTCGACCTGGTGCGC yojI 2330001 - 2328358 - | multidrug transporter membrane component/ATP-binding component TERM 2874 2328623 - 2328633 + g 79 -2.4 -5.28826 | opp_overlap 2328622 2328624, overlap 2328614 GCCAGCGCCAGCAAC AGCG CCA CGCG TTTTTTCTGCCCTTT alkB 2330727 - 2330077 - | alkylated DNA repair protein ada 2331791 - 2330727 - | O6-methylguanine-DNA methyltransferase; transcription activator/repressor yojL 2332920 - 2331865 - | thiamine biosynthesis lipoprotein ApbE TERM 2875 2333017 - 2332990 - R 80 -12.8 -3.10622 | opp_overlap 2332997, overlap 2332997 TACGCTGAAAACAAT GAAAAAAGGGCC CGCA GGCCCTTTGTTC GATATCCATCGAGAT TERM 2876 2332997 - 2333010 + r 87 -9.5 -4.23213 | opp_overlap 2332997 2332990 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCCA TERM 2877 2333010 - 2332997 - R 100 -9.5 -5.43514 | opp_overlap 2332997, overlap 2332990 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCCA ompC 2334153 - 2333032 - | outer membrane porin protein C TERM 2878 2334554 - 2334572 + H 100 -11 -5.48303 | TTACCCCTATTTCAA CCGGATGC CTC GCATTCGG TTTTTTTACCCTTCT TERM 2879 2336258 - 2336232 - g 70 -5 -4.56978 | opp_overlap 2336240 CTGGTAAACAAGAAA CTCAAGCAGGCG CAG CGTCTGTATGAG AAAAACCAGCAGGGG yojN 2334891 - 2337563 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC rcsB 2337580 - 2338230 + | transcriptional regulator RcsB TERM 2880 2338240 - 2338273 + T 95 -14.7 -3.55622 | opp_overlap 2338231 2338250, overlap 2338241 2338253 GACTAATCATCTGTA GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA TTTGCACCGATTGCC TERM 2881 2338241 - 2338272 + T 100 -18.2 -2.73159 | opp_overlap 2338231 2338250, overlap 2338240 2338253 ACTAATCATCTGTAG GCCAGATAAGACGC GTTA GTGTCTTATCTGGC ATTTGCACCGATTGC TERM 2882 2338354 - 2338387 + T 95 -14.7 -3.61178 | opp_overlap 2338351 2338354, overlap 2338355 2338367 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GTGTCTTATCTGGCA TTTGCACTGAATGCC TERM 2883 2338387 - 2338354 - T 80 -12.5 -3.00585 | opp_overlap 2338354 2338355 2338367, overlap 2338351 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GTGTCTTATCTGGCA TTTGCACTGAATGCC TERM 2884 2338355 - 2338386 + T 100 -18.2 -2.76492 | opp_overlap 2338354 2338351, overlap 2338354 2338367 ATTACATTAAAGTAG GCCAGATAAGACGC GTCA GTGTCTTATCTGGC ATTTGCACTGAATGC rcsC 2341279 - 2338430 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 2885 2340897 - 2340876 - G 75 -4.5 -4.8543 | gap 1, overlap 2340880 TAAGCCGCAGAAAAA TTATCGCGCC AGT AGCGC-ATAA ACCACGCCAATGACT TERM 2886 2340977 - 2340996 + g 86 -10.7 -3.96148 | opp_overlap 2340967 2340965 2340977 AAACAGCGGTTCAAA CGCAGGC ACATCC GCCTGCG TTTCTCGTCCACGCG TERM 2887 2340996 - 2340977 - G 82 -11.4 -3.55815 | opp_overlap 2340977, overlap 2340967 2340965 AAACAGCGGTTCAAA CGCAGGCA CATC CGCCTGCG TTTCTCGTCCACGCG TERM 2888 2341505 - 2341450 - R 78 -6 -4.78157 | overlap 2341454 ACGAAAAATAAGAAA TGACCAATCTGCCGACGCTTGTTAAT GGTT ATATCCTGGCGTCGGCAGATCGCCCA GCAGTCTTATCTGAA SF2303 2342330 - 2341554 - | hypothetical protein TERM 2889 2341788 - 2341800 + g 82 -7.7 -4.57073 | CGTGACATCCATATC CAGTG CAC CACTG TTTTTCAGCACGGTG TERM 2890 2342232 - 2342203 - G 70 -3.6 -4.60041 | gap 2, overlap 2342204 ATCGATTGTGAAAAA CTGGCATCTTCGCC CTCT GCCG--GATGCCAG CCAGAGAGCGGTGCG SF2304 2343984 - 2342335 - | hypothetical protein TERM 2891 2342573 - 2342588 + g 95 -6 -5.40072 | opp_overlap 2342573, overlap 2342574 TCGCCTTGTAATATA CGCCGC CACT GCGGCA TTTTTTTCGCCAGCC TERM 2892 2342574 - 2342587 + g 76 -9.5 -3.83561 | opp_overlap 2342573, overlap 2342573 CGCCTTGTAATATAC GCCGC CACT GCGGC ATTTTTTTCGCCAGC TERM 2893 2342869 - 2342859 - G 70 -6.8 -4.05446 | opp_overlap 2342862, overlap 2342861 2342862 CTGGCGAAGCAGAAA CACG CTG CGTG GCGCTGCTGTCGGGG TERM 2894 2343883 - 2343909 + g 76 -10.8 -3.29829 | overlap 2343884 CAGCTGATACAGTTG ATCGTGCTGCGC ACC GCGCAGCACCAG TTGTAACGGCGTCTC TERM 2895 2343884 - 2343908 + g 84 -14.3 -2.57683 | overlap 2343883 AGCTGATACAGTTGA TCGTGCTGCGC ACC GCGCAGCACCA GTTGTAACGGCGTCT SF2305 2344500 - 2343985 - | hypothetical protein TERM 2896 2345091 - 2345112 + r 74 -10.9 -2.79679 | GGCATATTATCCGCC TGCTCGGCA TAAC TGTCGAGCA TATGCTGCCAGTATT SF2306 2347098 - 2346259 - | IS911 ORF2 TERM 2897 2346667 - 2346678 + g 77 -5.8 -4.63218 | opp_overlap 2346663 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG SF2307 2347463 - 2347125 - | IS911 ORF1 TERM 2898 2348874 - 2348861 - R 70 -2.3 -4.96848 | overlap 2348862 TCTCGGAGACAAAAA CGCCG CCTT CAGCA TCCTTACCCAGAATG SF2309 2350399 - 2349776 - | hypothetical protein TERM 2899 2349993 - 2350007 + g 93 -11.4 -4.2074 | opp_overlap 2349986 AAAAAAATCATATCG CCAGGC AGC GCCTGG TTTATGTCTTGGCCA TERM 2900 2350057 - 2350073 + g 75 -5.7 -4.59773 | GAATCAAATTAATCG CGGTCAC GTA GGGGCCG TTTTTCCCGCTCCCC TERM 2901 2351309 - 2351324 + r 70 -2.4 -5.07567 | overlap 2351314 GCGCTGACCACGATG CGCAGG CGTA CTGGCG TTTTTTCGGCTGTAC TERM 2902 2351355 - 2351370 + r 76 -4.6 -5.03314 | opp_overlap 2351356, overlap 2351356 GCTCTTCCAGGCCAA AGCTGG CTTG CCAGCG TTTTTTACCGCTCAA TERM 2903 2351635 - 2351605 - R 71 -7.6 -3.92542 | overlap 2351608 2351630 2351631 2351633 GGTAGCGGCAAACAA CAATGGCTCCAGCA GTT TGCTTAAACCACTG CGCTGGATCAGCACC TERM 2904 2351830 - 2351820 - R 78 -5.4 -4.73682 | TCTGATAATAGAAAA CGAA ATC TTCG CTCAGAACATCGTGG TERM 2905 2352181 - 2352160 - R 81 -8.7 -4.55023 | opp_overlap 2352160, overlap 2352155 CCTAATACGACAAAA GCCCAGACT TTGC AGCCTGGAC TTTTCAATTCAAACA TERM 2906 2352198 - 2352211 + r 76 -8.1 -4.13767 | opp_overlap 2352198 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA TERM 2907 2352211 - 2352198 - R 74 -8.1 -4.0098 | opp_overlap 2352198 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA gyrA 2354860 - 2352233 - | DNA gyrase subunit A TERM 2908 2353988 - 2354008 + g 82 -2.4 -5.45802 | overlap 2353980 AGACTCGTCACGCAG CGCGCTGA TGCCT TCCACGCG TTTTTCTTTTACCAG ubiG 2355007 - 2355729 + | 3-demethylubiquinone-9 3-methyltransferase TERM 2909 2355762 - 2355776 + F 73 -10 -3.30124 | overlap 2355757 2355773 GCCAATGCCTGATGC GACGCT TGC AGCGTC TTATCAGGCCTACAA TERM 2910 2355773 - 2355817 + F 88 -12.3 -3.53811 | opp_overlap 2355814, overlap 2355762 2355804 ATGCGACGCTTGCAG CGTCTTATCAGGCCTAC AAATGCTCTCC GTAGGCCAGATAAGGCG TTTACGCCGCATCCG TERM 2911 2355897 - 2355884 - f 71 -3.7 -4.87665 | overlap 2355885 2355886 CGTCATCGACAAAAA CCCTG CCGT CTGGG CAAAATCATCACTCC TERM 2912 2359436 - 2359408 - f 80 -6 -5.07567 | gap 1, overlap 2359433 TCATATCCGAAAAAA CCAG-CCATTGCC CATC GGCGATAGACTGG CCCCCTGAATCTCCA SF2313 2359607 - 2359885 + | IS2 orf1 SF2314 2359843 - 2360748 + | insertion element IS2 transposase InsD TERM 2913 2362594 - 2362581 - g 77 -6.7 -4.56597 | GCTGGTGTTGAAAAA CAACC GTGG GGTTG AAGGCAACCGCGTGC TERM 2914 2363453 - 2363441 - g 70 -4.8 -4.4959 | opp_overlap 2363451 GTGAATCAATCAAAA CGCA CGGCC TGCG TAACTCCACGCTTTC nrdA 2361619 - 2363904 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2915 2363974 - 2363931 - f 90 -13.3 -3.53811 | opp_overlap 2363923 2363939, overlap 2363971 2363973 CGGATGCGGCGTAAA CGCCTTATCCGGCCTAC GGCTCGGTTT GTAGGCCTGATAAGACG CGCCAGCGTCGCATC TERM 2916 2364025 - 2364042 + F 71 -7.7 -3.88291 | gap 1 AGCGTGAACGCCTTA TCCG-GCC TAC GGCTCGGA TTTGTAGGCCTGATA nrdB 2364138 - 2365268 + | ribonucleotide-diphosphate reductase subunit beta yfaE 2365268 - 2365522 + | 2Fe-2S ferredoxin YfaE inaA 2366226 - 2365576 - | hypothetical protein yfaH 2366441 - 2366647 + | hypothetical protein TERM 2917 2366680 - 2366655 - T 93 -15.5 -2.86743 | overlap 2366657 AAATTTGATATGAGA CAGGATGGCGC ATGA ACGCCATCCTG CAGTAACATTACTCT TERM 2918 2366678 - 2366657 - T 80 -12.3 -2.97925 | overlap 2366655 ATTTGATATGAGACA GGATGGCGC ATGA ACGCCATCC TGCAGTAACATTACT glpQ 2367765 - 2366689 - | glycerophosphodiester phosphodiesterase glpT 2369128 - 2367770 - | sn-glycerol-3-phosphate transporter TERM 2919 2367975 - 2367991 + g 79 -3.5 -5.08824 | AGCCCGGTAAAGCCC GCTGCCG TAC CTGCCGC TTTTTTCGGTGCCAG TERM 2920 2368407 - 2368426 + g 76 -4.2 -4.94972 | gap 1 ATGAAGATTTGCTTC GCGG-TCAG CTC CTGTTCCGC TTTTTCGTTATAGTC TERM 2921 2368864 - 2368849 - G 70 -6 -4.25104 | CTGCGGGCAGGAAAA CGCGCG GATT CGAGCG ATCCGATACCGAACC glpA 2369401 - 2371029 + | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 2922 2371103 - 2371088 - g 72 -4.6 -4.66833 | CTGCAACTGCAAAAA CACGGC CTGC GCTGTG CCATTGTCACGCGTG TERM 2923 2372041 - 2372031 - g 74 -8.2 -3.86897 | TTGATGTGCTACAAA CCGC CAC GCGG GGTGAATGGTATAAG glpB 2371019 - 2372278 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2372275 - 2373465 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 2924 2373478 - 2373505 + F 100 -14.2 -4.65895 | TAAACTCCCTTCTGA TGCCCGGTAAGC ATGT GGTTACCGGGCA TTTTTGCGTACACGA TERM 2925 2373799 - 2373760 - g 71 -9.4 -3.4376 | gap 1 ATACATTTACCAGAA CCACTGCGCAAGCTTTGCA ACC TGCAAACCTTACGCC-TGG AACCCACTAGTTTTA yfaD 2373658 - 2374608 + | hypothetical protein SF2328 2376376 - 2375174 - | competence damage-inducible protein A TERM 2926 2375880 - 2375862 - G 87 -4.5 -5.27335 | gap 1, overlap 2375863 TGTGGTAAAGAAAAA CGCTCGCG CAGG CGCG-GCA GGATTTCGTGCTCGA SF2329 2377005 - 2376463 - | hypothetical protein yfaO 2377347 - 2377709 + | hypothetical protein TERM 2927 2377737 - 2377716 - T 82 -13.1 -2.93073 | opp_overlap 2377706, overlap 2377699 2377713 CTTCTTTAACAATGA TGACAGCCA TCAC TGGCTGTCA GATTGAAAATTTAGT ais 2378326 - 2377748 - | protein induced by aluminum SF2332 2378658 - 2379797 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase SF2333 2379801 - 2380769 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2928 2380991 - 2381003 + F 88 -7.7 -5.0432 | CGCATTGCCCAACTG TCACC AGA GGTGA TTTTCTCTTTTTATT TERM 2929 2382228 - 2382208 - g 70 -4 -4.59773 | opp_overlap 2382208 GCCTATGGCGAAAAA GAGGGT TTACAGTTC ACCCTC TTCCTCCCGTTTAAC ybfG 2381200 - 2382750 + | hypothetical protein SF2335 2382747 - 2383637 + | hypothetical protein TERM 2930 2383859 - 2383820 - g 75 -5.7 -4.59773 | opp_overlap 2383820 2383818 2383821 2383858, overlap 2383821 CGTTATTTCGAAAAA CCCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGGC TATTTGGCGCGAATA TERM 2931 2384669 - 2384647 - g 81 -4.8 -5.14563 | opp_overlap 2384650 GCTGGCAGCAAAAAA TAATCCTCTG GCG CTGCGGATTA ATGGCTGGATTAACA TERM 2932 2384867 - 2384842 - g 72 -6.9 -4.19678 | gap 1 GTACACCTTAACAAA CGTCGAAAAGAC CTG GTCTTT-CGCCG CGCTTTGCCCGCTGG arnT 2383637 - 2385289 + | 4-amino-4-deoxy-L-arabinose transferase TERM 2933 2385489 - 2385469 - f 73 -11.1 -2.59431 | opp_overlap 2385468 2385465, overlap 2385465 GTCTTGCAGAACGTA CCGGTAGGC ATT GCCTACCCG ATGTTAAGTCTGAAT TERM 2934 2385554 - 2385579 + F 72 -8.9 -3.56142 | opp_overlap 2385547 GGCACGAACCGGTAT CGCCGCGTCAC TGGT GTGGGGTGGCG TTCATTATTGGTGGC SF2337 2385621 - 2386007 + | hypothetical protein pmrD 2386273 - 2386001 - | polymyxin resistance protein B menE 2387733 - 2386378 - | O-succinylbenzoic acid--CoA ligase TERM 2935 2387617 - 2387652 + g 70 -9.7 -3.25015 | gap 1, opp_overlap 2387605 2387617 AAAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG TERM 2936 2387652 - 2387617 - G 75 -11.9 -3.06312 | gap 1, opp_overlap 2387617, overlap 2387605 AAAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG menC 2388692 - 2387730 - | O-succinylbenzoate synthase TERM 2937 2388092 - 2388109 + g 81 -9.1 -4.09511 | opp_overlap 2388091 TTTCACGGGCAAACG CTCGCGA ATCA TCGCGGG TTTTGCACGGCTCTT TERM 2938 2388606 - 2388616 + g 85 -8.2 -4.57837 | opp_overlap 2388603 CAGGCAAACGTACAG CCCG TCG CGGG TTTTTAACCGCCTGT menB 2389549 - 2388692 - | naphthoate synthase TERM 2939 2389594 - 2389571 - R 84 -10.4 -3.91897 | gap 1, opp_overlap 2389584 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATTACGCCAGCGGGA yfbB 2390322 - 2389564 - | acyl-CoA thioester hydrolase YfbB TERM 2940 2389599 - 2389624 + g 74 -9.7 -3.48276 | gap 1, overlap 2389584 CCAGACTTGCGATTA CGC-CAGCGGGA TTT TCCCGATGCGCG TTATGTCCGGCGCGA TERM 2941 2389731 - 2389720 - G 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 2942 2389789 - 2389755 - G 70 -10.8 -2.80796 | gap 1, opp_overlap 2389788, overlap 2389754 2389757 2389775 2389776 GGTTAGCACGTAAAT CAGGCTGGACGGCGA GAGAAG TCGCC-TCCAGCATG GCGGCAAGGGTTGCG TERM 2943 2390038 - 2390016 - G 72 -7.6 -3.95051 | CAATAACCCCACAAA GCCCCGCCAG CCC CTGGCAAGCC GCCATCATCGCCACC menD 2391989 - 2390319 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 2944 2391349 - 2391359 + g 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CGC GCTG TTTTTCACTTTCCAG menF 2393373 - 2392078 - | menaquinone-specific isochorismate synthase TERM 2945 2392512 - 2392531 + g 80 -5.6 -4.91109 | AGATATCTTCCACCA CCAGCATG TTCT CGCGCTGG TTTTTATCATCCGCC TERM 2946 2393438 - 2393408 - R 82 -13.4 -2.85847 | opp_overlap 2393396 AAGCCTCACATTATA CGGGGTACTACA AAAAAAA TGCAGTACCCCG GTGTAGGGAGGTTTT elaB 2393757 - 2393452 - | hypothetical protein elaA 2394273 - 2393812 - | hypothetical protein elaC 2394338 - 2395255 + | ribonuclease Z insA 2395691 - 2395966 + | IS1 ORF1 insB 2395993 - 2396388 + | IS1 ORF2 TERM 2947 2396649 - 2396686 + F 78 -12.1 -2.96695 | opp_overlap 2396651, overlap 2396647 ACATCATTGTTAATC AATTCGACCAGTCAGTA AATA TGCTGACTGGTCGAACA TAATTTGCTAAAAAG TERM 2948 2396684 - 2396651 - f 100 -16.9 -3.35073 | opp_overlap 2396649 2396647 ATCATTGTTAATCAA TTCGACCAGTCAGTA AATA TGCTGACTGGTCGAA CATAATTTGCTAAAA TERM 2949 2396756 - 2396783 + F 100 -15 -3.16785 | gap 1, opp_overlap 2396764, overlap 2396764 AATCTACGGGTATTT CCAGCATATCGCG GCA CGCGAT-TGCTGG TCTGTTGATGTAGTG TERM 2950 2397176 - 2397153 - f 83 -4 -5.38249 | gap 1 AGCAATTAGAAAAAA CAGTTCGT-TA TCT TACACAAACTG TGCATCCACGTAATG yfbM 2397771 - 2398094 + | hypothetical protein TERM 2951 2398117 - 2398137 + T 74 -8.2 -3.97368 | opp_overlap 2398118, overlap 2398118 AGAGCGCCAAAAAAA ACCGCCGA ACATG TCGGCGGC TTTCTGACTTACAAA TERM 2952 2398118 - 2398136 + T 78 -11.7 -2.981 | opp_overlap 2398118, overlap 2398117 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA TERM 2953 2398136 - 2398118 - T 100 -11.7 -5.76949 | opp_overlap 2398117 2398118 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA nuoN 2399618 - 2398161 - | NADH dehydrogenase subunit N TERM 2954 2398800 - 2398788 - G 73 -9.1 -3.67296 | GATGATGGAGGCAAA GGCGA TAA TCGCC AGTACTACGCGAATC nuoM 2401154 - 2399625 - | NADH dehydrogenase subunit M TERM 2955 2400588 - 2400578 - G 74 -2.4 -5.10461 | overlap 2400579 2400581 2400582 TGTAGTGAACAAAAA CCAG CGC CAGG ATGGCGATCAACATC TERM 2956 2400946 - 2400934 - G 75 -6.9 -4.41956 | ATAGAGATACCAAAA CGCGG GAT CCACG GCATGTCGAATTCAG TERM 2957 2401238 - 2401280 + r 71 -7.7 -3.88232 | gap 1, overlap 2401239 TCTCTTCGGACTGGG GGTAGTGTCGGATGCGCCGC GAAG GCAGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 2958 2401239 - 2401279 + r 74 -11.2 -2.92618 | gap 1, overlap 2401238 CTCTTCGGACTGGGG GTAGTGTCGGATGCGCCGC GAAG GCAGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2403159 - 2401318 - | NADH dehydrogenase subunit L TERM 2959 2401814 - 2401832 + g 72 -4.6 -4.68601 | overlap 2401812 CTGTGAGTTACCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT TERM 2960 2402644 - 2402625 - G 78 -7.8 -4.33165 | CGAAAGCGAGGAAAA CGTCACCC ACAC GGGTCACG ACGAACGCTTTCATT nuoK 2403458 - 2403156 - | NADH dehydrogenase subunit K nuoJ 2404009 - 2403455 - | NADH dehydrogenase subunit J nuoI 2404563 - 2404021 - | NADH dehydrogenase subunit I nuoH 2405555 - 2404578 - | NADH dehydrogenase subunit H TERM 2961 2404948 - 2404924 - G 77 -12.1 -2.71712 | overlap 2404923 TCCGGCTGGTCAAAC GGGTGACGGTG ACA CACCGCCACGC CCGCGATGGCAAAGG TERM 2962 2405398 - 2405378 - G 90 -14.7 -2.71364 | TCATGTCCGCAACCA GCTGGAGCG AAC CGCCCCAGC CAACACGGTTAGGTC nuoG 2408278 - 2405552 - | NADH dehydrogenase subunit G TERM 2963 2407515 - 2407526 + g 70 -5.8 -4.18018 | TAGTGGTTTACCGTA CCGT TGTA ACGG TTTTCGATACGACGC TERM 2964 2408170 - 2408151 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2409668 - 2408331 - | NADH dehydrogenase I subunit F TERM 2965 2408790 - 2408804 + g 88 -11.4 -3.84451 | GTCAGTCCCCGCGCC GCCTGG CTG CCAGGC TTTAAATTTCAGACC TERM 2966 2409591 - 2409605 + g 81 -10 -3.96148 | overlap 2409590 GCTGCGGTATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2410165 - 2409665 - | NADH dehydrogenase subunit E nuoC 2411970 - 2410168 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 2967 2411690 - 2411679 - G 72 -5.8 -4.41548 | opp_overlap 2411688, overlap 2411687 2411688 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 2968 2411711 - 2411687 - G 74 -3.3 -4.89729 | opp_overlap 2411688, overlap 2411679 2411688 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT nuoB 2412726 - 2412064 - | NADH dehydrogenase subunit B nuoA 2413185 - 2412742 - | NADH dehydrogenase subunit A TERM 2969 2412887 - 2412873 - G 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC TERM 2970 2413739 - 2413774 + r 100 -8.9 -5.09173 | opp_overlap 2413742, overlap 2413740 2413742 GATTTTTACTAAAAA AAAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTCG TTTTTTACACTATTG TERM 2971 2413740 - 2413773 + r 88 -12.4 -3.6442 | opp_overlap 2413742, overlap 2413739 2413742 ATTTTTACTAAAAAA AAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTC GTTTTTTACACTATT TERM 2972 2413771 - 2413742 - R 100 -15 -5.86061 | opp_overlap 2413742 2413740 2413739 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTTACACTA TERM 2973 2413742 - 2413771 + r 100 -15 -3.38726 | opp_overlap 2413742, overlap 2413740 2413739 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTTACACTA lrhA 2414755 - 2413817 - | LysR family NADH dehydrogenase transcriptional regulator TERM 2974 2414038 - 2414064 + g 77 -12.2 -2.78679 | overlap 2414037 GGCTCATCATCTCAA CCGGCCTTGCCG TCA CGCCAAGACCGG CTTTCACTGCCGCAC TERM 2975 2414505 - 2414479 - G 72 -11.1 -3.12482 | opp_overlap 2414486, overlap 2414483 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGGATTTTCC TERM 2976 2414525 - 2414508 - G 72 -6.3 -4.30576 | gap 1, overlap 2414510 GCCTCATCATTAAAA CG-CAGGA TTT TCCTGGCG TAACCAAGAAGTTGA TERM 2977 2415679 - 2415663 - H 76 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC TERM 2978 2415913 - 2415891 - g 70 -10.6 -2.75963 | overlap 2415890 ATTGCGATTCCAAAG GGCTTTACTC CGC GCGTAAAGCC ATCATGCAGCACTAC SF2366 2415674 - 2416891 + | aminotransferase AlaT TERM 2979 2416901 - 2416927 + F 86 -13.8 -3.28791 | CTGTAATCTTAATTT CACTGCCGGA GATTGCA TCCGGCAGTG TTATCCCGCCACAAT TERM 2980 2417483 - 2417456 - g 70 -4.8 -4.56597 | gap 1, overlap 2417458 2417471 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG TCGCAGCCAGGAGAT TERM 2981 2417503 - 2417517 + G 72 -7.2 -4.1673 | AGCCAGGAGATGGAC TACTTC ATG GAAGTA TTTGTTCCCAGCTTC SF2367 2416975 - 2417574 + | hypothetical protein yfbS 2419465 - 2417633 - | putative transport protein TERM 2982 2419532 - 2419515 - R 100 -9.8 -5.24129 | TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG yfbT 2420202 - 2419552 - | putative phosphatase TERM 2983 2419832 - 2419845 + g 76 -9.5 -3.79419 | overlap 2419831 ACAAACACCTCTGGT GCGGG AAGC CCCGC TATTTTATGGCGCGC SF2370 2420707 - 2420213 - | hypothetical protein TERM 2984 2420746 - 2420764 + r 74 -6 -4.55689 | opp_overlap 2420746 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 2985 2420764 - 2420746 - R 89 -6 -5.76949 | opp_overlap 2420746 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT SF2371 2421245 - 2420790 - | hypothetical protein ackA 2421583 - 2422785 + | acetate kinase TERM 2986 2422789 - 2422816 + F 100 -16.4 -4.36914 | gap 1, overlap 2422791 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 2987 2422791 - 2422813 + F 100 -19.2 -2.8733 | overlap 2422789 GACTGCCTGATTTCA CACCGCCAGC TCA GCTGGCGGTG CTGTTTTGTAACCCG TERM 2988 2423831 - 2423846 + G 78 -9 -3.96148 | overlap 2423835 CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2422860 - 2425004 + | phosphate acetyltransferase TERM 2989 2425045 - 2425067 + F 100 -10.7 -5.64304 | CTGCGGATATCTGAA CCGGAAATA ATCAC TATTTCCGG TTTTTTATTCTCTTA TERM 2990 2426017 - 2426036 + G 74 -8.6 -3.87149 | overlap 2425989 TTCGTGAAAAGCAGG CGGATGTT GAAC AACGTCCG TTTACCTTTGGTGAC yfcC 2425194 - 2426714 + | hypothetical protein TERM 2991 2426724 - 2426741 + T 100 -12.7 -5.32944 | opp_overlap 2426719 2426726 CACTAAAAATGTTAA GAGCCGC AATT GCGGCTC TTTTTTCATTCTGCC TERM 2992 2426739 - 2426726 - T 71 -9.5 -3.17553 | opp_overlap 2426724, overlap 2426719 CTAAAAATGTTAAGA GCCGC AATT GCGGC TCTTTTTTCATTCTG SF2375 2427289 - 2426747 - | putative regulator TERM 2993 2426835 - 2426853 + g 82 -9.6 -4.16016 | opp_overlap 2426834 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA yfcE 2427898 - 2427347 - | phosphodiesterase yfcF 2428598 - 2427954 - | hypothetical protein TERM 2994 2428290 - 2428305 + g 86 -9 -4.42386 | CCAGGCCTGAATCTG TCGTGC ACGC GCACGA TTTTCTAAATCAAGC TERM 2995 2429001 - 2428981 - g 70 -5.4 -4.37092 | overlap 2428984 ATCTGGCTGAGAAAA CAGGACTC TTTTT GAGTCATG AAACGCGTGAGCGCG yfcG 2428734 - 2429381 + | putative S-transferase folX 2429438 - 2429800 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 2996 2430086 - 2430064 - g 71 -2.6 -4.93968 | overlap 2430066 ACTCACAAGCAAAAA GAGCGTCTCT GCC AAAGCCGCTG GAATATCACGCAAAA TERM 2997 2430278 - 2430238 - g 93 -12.6 -3.93583 | gap 1, overlap 2430223 GAATTTACTCATAAA CTCTGCGCCC-GCTGGGAA GAGA TTGCCTGCCGGGCGCAAAG TGACAAAACGCGAGT SF2380 2429821 - 2430714 + | putative sugar nucleotide epimerase yfcI 2431652 - 2430762 - | hypothetical protein TERM 2998 2431628 - 2431616 - G 71 -9.1 -3.51168 | overlap 2431614 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 2999 2431843 - 2431817 - R 71 -7.3 -4.08064 | gap 1, overlap 2431819 AATTCCCCTTGAAAA TACTCCGGCAGC GTTA GCCACCGGAG-A GGAAATTATTTCAGC TERM 3000 2431842 - 2431819 - R 88 -12.4 -3.63744 | overlap 2431817 TTCCCCTTGAAAATA CTCCGGCAGC GTTA GCCACCGGAG AGGAAATTATTTCAG hisP 2432622 - 2431849 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2433346 - 2432630 - | histidine transport, membrane protein M TERM 3001 2432655 - 2432668 + g 72 -4.5 -4.64766 | opp_overlap 2432646, overlap 2432656 GAAGAAGGTTTCACA TGCTG CAAC CAGCG TTTTTCCGCTCTGCG hisQ 2434029 - 2433343 - | histidine transport system permease protein TERM 3002 2434065 - 2434099 + r 70 -4.9 -4.42062 | gap 1, overlap 2434066 TGGTGAATTACCGCC TCTTGTCTCCCTCCGG TTAC CCGAAGGGAG-CGGGC TTTCTTTCACCGATG hisJ 2434900 - 2434106 - | histidine-binding periplasmic protein of high-affinity histidine transport system TERM 3003 2434760 - 2434772 + g 84 -4.1 -5.27477 | opp_overlap 2434752 ATCGAAACCAACCAG TTCGC CTT GTGAA TTTTTTGATTCAAAT argT 2435903 - 2435121 - | lysine-, arginine-, ornithine-binding periplasmic protein TERM 3004 2435247 - 2435270 + g 100 -5.2 -5.63645 | ATCTTTACGTAGCCC TACACCGGTG CCAT CACCGAAGTA TTTTTTGTCTTTTAC TERM 3005 2436160 - 2436142 - R 95 -13.2 -4.07687 | overlap 2436153 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG ubiX 2436738 - 2436169 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3006 2436820 - 2436802 - R 78 -12.4 -2.53263 | GGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TCAGCGAAGGCATCA purF 2438350 - 2436833 - | amidophosphoribosyltransferase TERM 3007 2437252 - 2437265 + g 73 -3.7 -4.82901 | GGACGATGGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 3008 2438121 - 2438087 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TAGGGTAACGCACAT cvpA 2438875 - 2438387 - | colicin V production protein TERM 3009 2439003 - 2438978 - R 100 -9.8 -5.1356 | GCGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC dedD 2439796 - 2439134 - | hypothetical protein folC 2441054 - 2439786 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3010 2440453 - 2440466 + g 70 -3.7 -4.65895 | opp_overlap 2440438 GGCATTTCCGGCTCA CCGAC AATT GCCGG TTTTTCGCTGCGGAA TERM 3011 2441030 - 2441006 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 3012 2441091 - 2441113 + r 93 -14.8 -3.45054 | opp_overlap 2441091 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 3013 2441113 - 2441091 - R 100 -17 -4.46656 | opp_overlap 2441091 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2442038 - 2441124 - | acetyl-CoA carboxylase subunit beta TERM 3014 2442060 - 2442074 + r 71 -3.5 -4.78848 | CCTTTCTGTCTGAAC CTGGT TCGAT GCCAG TTTTATCTTTGGGGA TERM 3015 2442182 - 2442170 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC GGAGTTACTTTTTAT dedA 2442853 - 2442194 - | hypothetical protein TERM 3016 2442870 - 2442926 + r 80 -9.5 -3.90241 | overlap 2442881 2442921 TTTGCCTATGCCTTG TACTCGTCATCTTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAATGTTCCGAGCA TTATTCTCGTTAGTC TERM 3017 2442881 - 2442915 + r 93 -15.2 -3.03338 | overlap 2442870 CTTGTACTCGTCATC TTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCATTAT truA 2443748 - 2442936 - | tRNA pseudouridine synthase A TERM 3018 2443500 - 2443525 + g 72 -8.1 -3.92542 | ATTTACGCCCAAGGT CCACGCCGCGT CTTT GCGCTGCGCGG TTGTTTCGAAATGCA usg 2444761 - 2443748 - | putative semialdehyde dehydrogenase TERM 3019 2444814 - 2444787 - R 73 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATGTTA CAGCAGAGAGC ATGAAGAAGAGATTA pdxB 2445963 - 2444827 - | erythronate-4-phosphate dehydrogenase TERM 3020 2445493 - 2445456 - G 82 -12 -3.48063 | overlap 2445458 TATGGAAAGTCAGAA TATCCGCGCGCTGGAC TAACTC ATCCAGCGAGCGGAAA TCACCCTCATCCCCA TERM 3021 2445491 - 2445458 - G 100 -14.6 -3.30797 | overlap 2445456 TGGAAAGTCAGAATA TCCGCGCGCTGGAC TAACTC ATCCAGCGAGCGGA AATCACCCTCATCCC div 2446062 - 2447057 + | flagella biosynthesis regulator SF2398 2448232 - 2447054 - | hypothetical protein TERM 3022 2448179 - 2448163 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGAGA TGCGG AAGAGCGAAAAACTG TERM 3023 2448393 - 2448424 + r 81 -12.4 -3.14132 | opp_overlap 2448400, overlap 2448400 CGATTGTCAATGATG TGAAAAAGGGAACC ATCA GGTTCCCTTTTGCG TTAGTGCCGGAGGCC TERM 3024 2448400 - 2448417 + r 91 -11.3 -4.30014 | opp_overlap 2448400, overlap 2448393 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC TERM 3025 2448417 - 2448400 - R 95 -11.3 -4.64598 | opp_overlap 2448393 2448400 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC fabB 2449728 - 2448487 - | 3-oxoacyl-(acyl carrier protein) synthase I mnmC 2449887 - 2451893 + | 5-methylaminomethyl-2-thiouridine methyltransferase SF2401 2452292 - 2452014 - | hypothetical protein SF2402 2452874 - 2452326 - | putative transporting ATPase yfcA 2453683 - 2452874 - | hypothetical protein TERM 3026 2453241 - 2453226 - G 75 -4.6 -4.84017 | AATCCGTCATAAAAA CCGACG CAGC CACCGG CAATTAACGCGAAGG mepA 2454507 - 2453683 - | penicillin-insensitive murein endopeptidase TERM 3027 2454413 - 2454428 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 3028 2454484 - 2454497 + g 76 -3.7 -4.95211 | GGCAAGCAGAGCCAG CAGCG CAAT CGCGG TTTTGTTCATTTTTT aroC 2455596 - 2454511 - | chorismate synthase TERM 3029 2455153 - 2455167 + g 77 -2.8 -5.03314 | opp_overlap 2455153, overlap 2455155 GATTTCAATACCAAA TTTCTC GGC GAGATA TTTTTTGGCAATCGC yfcB 2456896 - 2455631 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase SF2406 2456729 - 2457280 + | hypothetical protein SF2408 2458274 - 2457384 - | hypothetical protein TERM 3030 2457853 - 2457843 - G 78 -5.4 -4.75472 | TGTATAGGAATAAAA GGAT GCG ATCC AAGGGCAACCATAAT SF2409 2458785 - 2458261 - | fimbrial protein SF2410 2459252 - 2458782 - | putative minor fimbrial subunit SF2411 2459797 - 2459249 - | putative minor fimbrial subunit TERM 3031 2459951 - 2459941 - R 74 -8.2 -3.87075 | opp_overlap 2459937 ACTATTGGCGAGAAA CCGG CTG CCGG ATTGCCATTTTTCTG SF2413 2461329 - 2460544 - | hypothetical protein TERM 3032 2461397 - 2461422 + r 77 -11.3 -3.28712 | opp_overlap 2461402, overlap 2461399 TCCGTCCCACTGCCA TAGTACCGTTA TAGC TAACGGTACTG TTGTCGCCCCACGGC TERM 3033 2461399 - 2461420 + r 79 -11.7 -3.21276 | opp_overlap 2461402, overlap 2461397 CGTCCCACTGCCATA GTACCGTTA TAGC TAACGGTAC TGTTGTCGCCCCACG TERM 3034 2461644 - 2461616 - R 71 -7.3 -4.05747 | opp_overlap 2461616 2461622, overlap 2461625 TATAGTTGAGATAAA CCGAAACACCCGC ATC GCGGAAGTTCTGG TTATAAGTGGCGGTG TERM 3035 2462416 - 2462426 + r 74 -6.8 -4.32034 | TAATCCTCGCCCAGC GCCA GTT TGGC TTTTAATGATGGTAA TERM 3036 2462956 - 2462968 + r 72 -4.7 -4.56702 | AAATATCGTACTCTT CCGCC AAT GGCTG TTTATTTAGTTGAAC TERM 3037 2463260 - 2463233 - R 93 -12 -3.80569 | opp_overlap 2463233, overlap 2463234 CAAAATACATTTAAA TCCCCCATAGCA GTGT CGCTATGGGGGT ATGCCTTACAGGTAA TERM 3038 2463259 - 2463234 - R 93 -15.5 -2.87257 | opp_overlap 2463233, overlap 2463233 AAAATACATTTAAAT CCCCCATAGCA GTGT CGCTATGGGGG TATGCCTTACAGGTA SF2415 2463829 - 2463266 - | putative fimbrial-like protein TERM 3039 2463614 - 2463629 + g 70 -4.6 -4.51654 | AATCTGGAAACTTTT CGGCGT GGTG GTGCCG TTATTTTTCAGTTTT TERM 3040 2463754 - 2463810 + g 77 -8.8 -4.09739 | overlap 2463742 TACCGTTGTTACCCG CAGCGATTGTTGCCGTAGAGGTGA ACACGCCCA TCACCATTGCCGCAGCAATAGCTG TTTTAACAAACTTAC insB 2464493 - 2464098 - | IS1 ORF2 insA 2464795 - 2464520 - | IS1 ORF1 TERM 3041 2465246 - 2465278 + r 93 -13.7 -3.53811 | opp_overlap 2465246 CTGCCTAATGAGCAA TTATGCCCAATGA ATCTACC TCATTGGGCATAA TTTGGAACACATCAG TERM 3042 2465278 - 2465246 - R 90 -14.4 -3.27298 | opp_overlap 2465246 CTGCCTAATGAGCAA TTATGCCCAATGAA TCTAC CTCATTGGGCATAA TTTGGAACACATCAG SF2418 2465775 - 2465290 - | phosphohistidine phosphatase fadJ 2468122 - 2465978 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3043 2466325 - 2466337 + g 100 -4.8 -5.46698 | overlap 2466286 TGAGCGGGTAAATGG CAGG ATCGA CCTG TTTTTTGCTTTTACG TERM 3044 2466671 - 2466683 + g 70 -6.9 -4.13963 | opp_overlap 2466670 2466671, overlap 2466660 GTCACGCACGACAAT GGGCG TTT TGCCC TGTTTTTTCGCCAGT fadI 2469432 - 2468122 - | 3-ketoacyl-CoA thiolase TERM 3045 2469594 - 2469568 - H 100 -20.2 -5.3689 | AGAAAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG TACGTACCCGAGAGG fadL 2470268 - 2471608 + | long-chain fatty acid outer membrane transporter TERM 3046 2471630 - 2471650 + F 100 -15.5 -3.64822 | opp_overlap 2471630 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCCCACT TERM 3047 2471650 - 2471630 - f 100 -15.5 -3.85698 | opp_overlap 2471630 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCCCACT SF2422 2472120 - 2473328 + | iso-IS10R ORF SF2423 2473303 - 2474370 + | hypothetical protein TERM 3048 2474546 - 2474507 - T 77 -10.3 -3.3785 | opp_overlap 2474517, overlap 2474517 GTAATTGAGGGATAA CAACAAAAAAGGTGAGT TTTGCG ACTCACCTTTTTTATTT GTTTCTTATTCAGAA TERM 3049 2474536 - 2474517 - T 100 -7.9 -5.68489 | opp_overlap 2474517, overlap 2474507 GATAACAACAAAAAA GGTGAGT TTTGCG ACTCACC TTTTTTATTTGTTTC TERM 3050 2474517 - 2474536 + T 100 -8.6 -5.85425 | opp_overlap 2474517 2474507 GATAACAACAAAAAA GGTGAGTT TTGC GACTCACC TTTTTTATTTGTTTC vacJ 2475307 - 2474552 - | lipoprotein precursor yfdC 2475712 - 2476533 + | putative transport protein TERM 3051 2476829 - 2476807 - f 93 -10 -4.60487 | CATGACGGGTAAAAA GTGGATAAAA TAA TTTTACCCAC CGGATTTTTACCCAT SF2426 2476843 - 2477337 + | putative integrase SF2427 2478151 - 2477312 - | IS911 ORF2 TERM 3052 2477720 - 2477731 + g 77 -5.8 -4.63218 | opp_overlap 2477716 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 3053 2478072 - 2478092 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SF2428 2478480 - 2478178 - | IS911 ORF1 SF2429 2479084 - 2478461 - | IS4 orf TERM 3054 2479102 - 2479071 - G 100 -13.9 -4.4017 | opp_overlap 2479074 CCAATGTGCATAAAA GAATCCGGAAACA AGTGAG CGTTTCCGGATTC TTACACAGCCACTGG TERM 3055 2479074 - 2479099 + g 73 -9.1 -3.61398 | opp_overlap 2479071 ATGTGCATAAAAGAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 3056 2479287 - 2479302 + H 71 -7.6 -3.87815 | GTTAACGTTAACATT TGCGAT ATTC ATCGCA TTTATGAAAGTAAGG SF2430 2479382 - 2480815 + | hypothetical protein SF2431 2481881 - 2480823 - | sucrose specific repressor SF2432 2482029 - 2482247 + | high-affinity transport permease for gluconate TERM 3057 2482653 - 2482619 - g 70 -5.6 -4.36914 | opp_overlap 2482620 TCCGGCTCTATAAAA GCACGCGGCGGGATTT ATG AAGTCCTGGCACATGC AGAAAAACTGGCTCT dsdA 2482265 - 2483593 + | D-serine dehydratase emrY 2485239 - 2483701 - | multidrug resistance protein Y TERM 3058 2484810 - 2484821 + g 82 -2.2 -5.31877 | TTGACCATAATGCCA GAGC AAAT GTTC TTTTTTCTGGTGGAT emrK 2486402 - 2485239 - | multidrug resistance protein K TERM 3059 2485894 - 2485910 + g 81 -10.1 -3.89131 | TTATAAGCCTGGATA GCGGCAT TCA GTGCCGC TTTGCTACTTATTAA TERM 3060 2486024 - 2486051 + g 83 -10 -4.1337 | gap 1, opp_overlap 2486024, overlap 2486027 ATTGTTGATACTGAA TAC-GTGCTGAAG CGA CTTCGGCACTGTA TTGTTTATCCTGTAA TERM 3061 2486027 - 2486047 + g 80 -11.9 -3.39301 | opp_overlap 2486024, overlap 2486024 GTTGATACTGAATAC GTGCTGAAG CGA CTTCGGCAC TGTATTGTTTATCCT evgA 2486818 - 2487432 + | DNA-binding transcriptional activator EvgA TERM 3062 2487736 - 2487711 - g 75 -5.5 -4.60924 | overlap 2487700 TAAATCTTTTAAAAA GAGCGTTAAAT ATCA AATTAACACTC CGGGAATACGCAGAT TERM 3063 2488674 - 2488655 - g 100 -4.3 -5.66989 | opp_overlap 2488655 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC ATATTATTATGAGCT TERM 3064 2489586 - 2489574 - g 71 -3.3 -4.7373 | CTACCGTAGCAAAAA GTCAG TTT CTGGC AACGATGAGTCACGA evgS 2487437 - 2491030 + | hybrid sensory histidine kinase in two-component regulatory system with EvgA TERM 3065 2491037 - 2491063 + T 82 -11.6 -3.34517 | opp_overlap 2491032, overlap 2491032 2491035 AATGACTAAATTGCG GCTCCCACAATG TTC TAATGTGGGAGC TATTTACCAGCACAT yfdE 2492270 - 2491086 - | hypothetical protein TERM 3066 2491159 - 2491174 + g 75 -4.6 -4.87786 | opp_overlap 2491153, overlap 2491130 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 3067 2492276 - 2492252 - G 83 -6.5 -5.0133 | gap 1, opp_overlap 2492251 2492252 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA yfdV 2493249 - 2492305 - | putative transporter YfdV SF2440 2495013 - 2493319 - | putative oxalyl-CoA decarboxylase TERM 3068 2493910 - 2493927 + g 73 -3.5 -4.79667 | AAAGTAATTTAATGG TTGAGTA TCTG TACTTAA TTTTTCATGCATTTT TERM 3069 2494342 - 2494315 - G 76 -7.9 -4.1711 | gap 1, opp_overlap 2494323 AGCACTTTCAATAAA TTCACGAAGCTG TTCAT CAGCTT-GTGAA TACGCCGCGCCTTTG TERM 3070 2494835 - 2494820 - G 77 -6.1 -4.63218 | overlap 2494821 2494822 TTTTGGGTAAGAAAA CCGCT TGCCGC AGCGG CATAGCCTGCCGACT SF2441 2496317 - 2495067 - | formyl-coenzyme A transferase TERM 3071 2496159 - 2496211 + g 70 -6.2 -4.26903 | opp_overlap 2496164 2496166, overlap 2496160 2496164 AAGCGCATCGATATC AGGAATATCTCGCAGTTGGTGACG CGTTA CGTCACCAACGCCGGGACGTTCAA TTTTAATAACGTCAG TERM 3072 2496160 - 2496210 + g 70 -9.7 -3.1582 | opp_overlap 2496164 2496166, overlap 2496159 2496164 AGCGCATCGATATCA GGAATATCTCGCAGTTGGTGACG CGTTA CGTCACCAACGCCGGGACGTTCA ATTTTAATAACGTCA TERM 3073 2496204 - 2496166 - G 81 -12.4 -3.18849 | opp_overlap 2496164 2496160 2496159, overlap 2496164 TCGATATCAGGAATA TCTCGCAGTTGGTGACGC GTT ACGTCACCAACGCCGGGA CGTTCAATTTTAATA TERM 3074 2496775 - 2496739 - R 95 -11.9 -3.92542 | opp_overlap 2496738 2496737 GCGAGCGCCAAATAA TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA AATTGTCGGCTGGAG SF2442 2497453 - 2496830 - | hypothetical protein TERM 3075 2497881 - 2497871 - R 82 -5.4 -5.15381 | AAGAGACTGAAAAAA CATC AGC GATG ACGACCACACACTCT SF2443 2498344 - 2498102 - | hypothetical protein ddg 2498697 - 2499617 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 3076 2500085 - 2500066 - T 100 -13.6 -4.8622 | opp_overlap 2500066 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG TERM 3077 2500066 - 2500085 + T 100 -13.6 -3.89215 | opp_overlap 2500066 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG SF2445 2501346 - 2500108 - | aminotransferase TERM 3078 2501391 - 2501408 + H 71 -6.9 -4.11394 | overlap 2501393 2501404 ACCGTCCGAGCGACG CTGCCAC AATG GTGGCTG TTTTGAAAATAGCCT TERM 3079 2502380 - 2502359 - H 78 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC SF2447 2503224 - 2503958 + | putative 2-component transcriptional regulator TERM 3080 2504272 - 2504315 + T 72 -8.2 -3.69663 | gap 1, overlap 2504264 GCCTGGTGTTCGCAC CGACCTGGCTTGGGTTATCGT TTT ACGATAGCCGCA-CCACGTCG TTGTTGCATCCTGCT TERM 3081 2504459 - 2504509 + T 72 -4.7 -4.60797 | gap 1, opp_overlap 2504499, overlap 2504461 AAGTTTGCTGCATCT TTGCCGCAACGTGGTGAATATGCC GCCG GGTA-ATTCACAACCGCGCGGCGA TTTTCTCTATCACAG SF2449 2507326 - 2504831 - | putative PTS system enzyme IIA component, enzyme I TERM 3082 2505684 - 2505660 - G 78 -8.5 -4.23213 | opp_overlap 2505660 CCGATACTGAAGAAA TCGACCTCATC GCA GAAGTGGTCGA TGATGTAGCACACCG TERM 3083 2506212 - 2506246 + g 75 -5.1 -4.72486 | gap 2, opp_overlap 2506217, overlap 2506215 2506217 2506225 CGCTTGTTATCACGG GAATAGGC-CA-GCTGC GCG GCAGCCTGCGCCTGTTG TTTTTGGCGTTTATC TERM 3084 2506215 - 2506243 + g 77 -6.8 -4.45259 | gap 2, opp_overlap 2506217, overlap 2506212 2506217 2506225 TTGTTATCACGGGAA TAGGC-CA-GCTGC GCG GCAGCCTGCGCCTG TTGTTTTTGGCGTTT SF2450 2508388 - 2507351 - | exoaminopeptidase TERM 3085 2507464 - 2507434 - G 77 -8.4 -4.11216 | gap 2 GCTCCATCTGCAAAA TGTCGCGGCAATCG GCAAT CGAT-GCCGCG-CA ATGTCCGTGGCGGGT TERM 3086 2508690 - 2508648 - R 81 -13.2 -2.71144 | CAGCCTCGGTAATGA CCCGGCGCGCGGCGTCGTCA ATC TGCTGGCAGCGCACGCCGGG GCGAATTGCAGAGAT TERM 3087 2508870 - 2508921 + r 71 -10.8 -2.62184 | gap 1, overlap 2508854 CCCGCTGCAACAATC TTGTCGCTGGC-TTTGCCGTGCGGC AGC GCCCCGCGCCAGCCGCTGGCGACAA TGGTGTCAAAAGAGG SF2452 2510733 - 2509486 - | putative transport protein TERM 3088 2510161 - 2510187 + g 76 -12.4 -2.54732 | opp_overlap 2510163 2510168, overlap 2510160 2510163 2510168 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCATTTCAC TERM 3089 2510168 - 2510180 + g 72 -5.5 -4.56607 | opp_overlap 2510168 2510163, overlap 2510163 2510161 2510160 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC SF2453 2511081 - 2510755 - | putative PTS system enzyme IIB component TERM 3090 2511287 - 2511262 - R 72 -8.3 -3.70674 | overlap 2511260 2511263 2511265 GTATGATTTAAAAGA TTATCGGGAGA GTTA CCTCCCGATAT AACAGGAAGGATTTA TERM 3091 2511286 - 2511263 - R 77 -11.8 -2.81922 | overlap 2511262 2511260 2511265 TATGATTTAAAAGAT TATCGGGAGA GTTA CCTCCCGATA TAACAGGAAGGATTT TERM 3092 2511284 - 2511265 - R 70 -10 -2.95081 | overlap 2511263 2511262 2511260 TGATTTAAAAGATTA TCGGGAGA GTTA CCTCCCGA TATAACAGGAAGGAT glk 2512265 - 2511300 - | glucokinase SF2455 2512469 - 2513725 + | hypothetical protein SF2456 2513840 - 2514166 + | hypothetical protein TERM 3093 2514223 - 2514190 - T 73 -9.5 -3.44319 | opp_overlap 2514200, overlap 2514191 TCCAATGGAGCACAA TGCCTGATGCGACGC TAGC GCGTCTTATCAGGCC TACAAACCGGCTCTT TERM 3094 2514222 - 2514191 - T 81 -13 -2.6627 | opp_overlap 2514200, overlap 2514190 CCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCGGCTCT mntH 2515545 - 2514307 - | manganese transport protein MntH TERM 3095 2515576 - 2515561 - H 73 -7.6 -4.07568 | opp_overlap 2515561 2515556 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTATGCTA TERM 3096 2516474 - 2516495 + G 70 -7.3 -4.00782 | CGTCGTTGCTGCGCT GGTACTGAA CATG TTCAGCACC TTTATCGTGCTGTCG nupC 2515881 - 2517083 + | permease of transport system for 3 nucleosides TERM 3097 2517133 - 2517086 - f 100 -17.2 -4.07687 | opp_overlap 2517087 2517100, overlap 2517087 2517089 2517100 ACTGGTGCTGTAAAA CCATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC TERM 3098 2517132 - 2517087 - f 100 -20.7 -3.04398 | opp_overlap 2517087 2517100, overlap 2517086 2517089 2517100 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3099 2517087 - 2517132 + F 100 -16.3 -3.17212 | opp_overlap 2517087 2517086 2517089 2517100, overlap 2517100 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3100 2517130 - 2517089 - f 100 -17.5 -3.08032 | opp_overlap 2517087 2517100, overlap 2517087 2517086 2517100 GGTGCTGTAAAACCA TACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCC TGTTAATCAGCTAAT TERM 3101 2517100 - 2517119 + F 100 -15 -5.04987 | opp_overlap 2517089 2517087 2517086 2517100, overlap 2517087 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3102 2517119 - 2517100 - f 100 -15 -5.43414 | opp_overlap 2517100 2517087, overlap 2517089 2517087 2517086 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3103 2517332 - 2517285 - f 100 -17.2 -4.07687 | opp_overlap 2517286 2517299, overlap 2517286 2517288 2517299 ACTGGTGCTGTAAAA CCATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC TERM 3104 2517286 - 2517331 + F 100 -16.3 -3.17212 | opp_overlap 2517286 2517285 2517288 2517299, overlap 2517299 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3105 2517331 - 2517286 - f 100 -20.7 -3.04398 | opp_overlap 2517286 2517299, overlap 2517285 2517288 2517299 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3106 2517329 - 2517288 - f 100 -17.5 -3.08032 | opp_overlap 2517286 2517299, overlap 2517286 2517285 2517299 GGTGCTGTAAAACCA TACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCC TGTTAATCAGCTAAT TERM 3107 2517318 - 2517299 - f 100 -15 -5.43414 | opp_overlap 2517299 2517286, overlap 2517288 2517286 2517285 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3108 2517299 - 2517318 + F 100 -15 -5.04987 | opp_overlap 2517288 2517286 2517285 2517299, overlap 2517286 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3109 2518603 - 2518587 - f 80 -6.5 -4.74215 | AGATGATGAAGAAAA CGGGTAC CAG GTAACCG GCAATAAAGTCGTTT TERM 3110 2519443 - 2519424 - f 100 -11.4 -5.43414 | AGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTGGAAATTTGGTGG TERM 3111 2519984 - 2519972 - g 82 -9.1 -4.28762 | overlap 2519962 ACAACGTCACCAAAA CCTGG CGT CCAGG GTGGCAAAGCCCGAC yfeC 2519879 - 2520223 + | hypothetical protein TERM 3112 2520350 - 2520336 - g 71 -2.8 -4.87318 | overlap 2520328 TGGAAAACGGAAAAA TTTCCC GGC GTGAAA GGCGGTCGTGCCAGA yfeD 2520246 - 2520623 + | hypothetical protein TERM 3113 2520626 - 2520660 + T 84 -8.6 -4.58663 | opp_overlap 2520632, overlap 2520632 CGAATCAGCATAAAT AAAAAACGGCAGGATA TTA TCTCCTGCCGTTTATC TTTTTACACGCTAAT TERM 3114 2520654 - 2520632 - T 100 -12 -5.73978 | opp_overlap 2520626 2520632 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC TERM 3115 2520632 - 2520654 + T 100 -12 -4.55887 | opp_overlap 2520632, overlap 2520626 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC gltX 2522090 - 2520675 - | glutamyl-tRNA synthetase TERM 3116 2522657 - 2522625 - H 71 -9.9 -3.19463 | opp_overlap 2522626 2522634, overlap 2522626 2522634 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATACTCAA TERM 3117 2522626 - 2522656 + H 87 -14.9 -2.90212 | opp_overlap 2522626 2522625 2522634, overlap 2522634 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATACTCA TERM 3118 2522656 - 2522626 - H 80 -13.4 -2.51464 | opp_overlap 2522626 2522634, overlap 2522625 2522634 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATACTCA TERM 3119 2522648 - 2522634 - H 100 -9.2 -5.17576 | opp_overlap 2522626 2522634, overlap 2522626 2522625 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3120 2522634 - 2522648 + H 100 -8.5 -5.24989 | opp_overlap 2522634 2522626 2522625, overlap 2522626 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3121 2522741 - 2522717 - H 74 -8.6 -3.96483 | gap 2 AGCGCAGCGAAACAA CGGAGCCGCTCG CGG CGA-CGGC-CCG AAGGGCGAGCGAAGC TERM 3122 2522813 - 2522781 - H 100 -15.7 -3.19463 | opp_overlap 2522782 2522790, overlap 2522782 2522790 TGCACGACCCACCAA TGCAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATTTGTAA TERM 3123 2522782 - 2522812 + H 100 -18.5 -2.94194 | opp_overlap 2522782 2522781 2522790, overlap 2522790 GCACGACCCACCAAT GCAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3124 2522812 - 2522782 - H 100 -19.2 -2.51464 | opp_overlap 2522782 2522790, overlap 2522781 2522790 GCACGACCCACCAAT GCAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3125 2522804 - 2522790 - H 100 -9.2 -5.17576 | opp_overlap 2522790 2522782, overlap 2522782 2522781 CACCAATGCAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3126 2522790 - 2522804 + H 100 -8.5 -5.24989 | opp_overlap 2522782 2522781 2522790, overlap 2522782 CACCAATGCAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3127 2523226 - 2523215 - g 71 -2.2 -5.00884 | ATCCTGTTGAAAAAA CGAC TCAT ATCG ATATCTATATCTGAT flxA 2522899 - 2523240 + | hypothetical protein yfeR 2524157 - 2523231 - | putative LYSR-type transcriptional regulator TERM 3128 2524465 - 2524480 + G 73 -9 -3.69621 | TTTGTGGGTAATGTG CAGCAC CTTC GTGCTG TTTCCGATTCTGGGT yfeH 2524247 - 2525245 + | putative cytochrome oxidase ligA 2527477 - 2525462 - | NAD-dependent DNA ligase LigA TERM 3129 2527516 - 2527500 - R 93 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAGGAGTTA zipA 2528531 - 2527548 - | cell division protein ZipA TERM 3130 2528635 - 2528669 + H 72 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3131 2528788 - 2528798 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3132 2529067 - 2529077 + G 72 -6.8 -4.20516 | AACTGGATTGCCGCT CCGT TTA ACGG TTTATTGGCTGAACA cysZ 2528764 - 2529525 + | putative sulfate transport protein CysZ TERM 3133 2529565 - 2529584 + F 93 -12.8 -3.7347 | opp_overlap 2529563 2529565 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3134 2529584 - 2529565 - f 77 -10.6 -3.34398 | opp_overlap 2529565, overlap 2529563 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3135 2530190 - 2530176 - g 82 -3.4 -5.19261 | overlap 2530177 AAATTCACGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2529710 - 2530681 + | cysteine synthase A TERM 3136 2530710 - 2530725 + F 100 -9 -5.26316 | opp_overlap 2530710 2530701 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC TERM 3137 2530725 - 2530710 - f 100 -9 -5.08011 | opp_overlap 2530710, overlap 2530701 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC ptsH 2531065 - 2531322 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3138 2531684 - 2531655 - g 72 -6.5 -4.36903 | gap 1, opp_overlap 2531655 2531655, overlap 2531657 CTGATTAAAGATAAA CACATGA-CAGCTG ACG CAGCTGCTCATGAA GTTATCGAAGGTCAG TERM 3139 2531682 - 2531657 - g 88 -11.3 -3.78193 | gap 1, opp_overlap 2531655 2531655, overlap 2531655 GATTAAAGATAAACA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2531367 - 2533094 + | phosphoenolpyruvate-protein phosphotransferase crr 2533135 - 2533644 + | glucose-specific PTS system component TERM 3140 2533657 - 2533688 + T 95 -16.8 -2.70932 | opp_overlap 2533664, overlap 2533664 2533686 TAATTCTTGCCGCAG TGAAAAATGGCGCC CATC GGCGCCATTTTTTA TGCTTCCGCCAGCGG TERM 3141 2533681 - 2533664 - T 100 -12.7 -4.65895 | opp_overlap 2533664 2533657 TGCCGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTATGCTTCCG TERM 3142 2533664 - 2533681 + T 100 -12.7 -5.37345 | opp_overlap 2533664, overlap 2533657 TGCCGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTATGCTTCCG pdxK 2534537 - 2533686 - | pyridoxal kinase TERM 3143 2533977 - 2533990 + g 77 -6.7 -4.56597 | CACCCATTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA TERM 3144 2534859 - 2534869 + G 72 -6.8 -4.25056 | GTAACCGCATTGACA CTGC CGA GCAG TTTATTGATAAGGTA yfeK 2534642 - 2535016 + | hypothetical protein TERM 3145 2535775 - 2535813 + T 82 -11.2 -3.62046 | gap 1, opp_overlap 2535776, overlap 2535776 ACACGAAAATTAAAA ACTGCATTTGTCGGCAG CAACAA CTGCCGACAAAT-CAGA TTATTGACAAAGTGC TERM 3146 2535776 - 2535812 + T 87 -14.7 -2.77013 | gap 1, opp_overlap 2535776, overlap 2535775 CACGAAAATTAAAAA CTGCATTTGTCGGCAG CAACAA CTGCCGACAAAT-CAG ATTATTGACAAAGTG TERM 3147 2535812 - 2535776 - T 100 -15.4 -5.1166 | gap 1, opp_overlap 2535776 2535775 CACGAAAATTAAAAA CTGCATTTGTCGGCAGC AACA ACTGCCGACAAAT-CAG ATTATTGACAAAGTG TERM 3148 2535883 - 2535826 - T 75 -11.3 -2.96164 | opp_overlap 2535821 2535831 2535833, overlap 2535825 AGATTATTGACAAAG TGCACTTTGTTTATGCCGGATGCGGCG TAAA CGCCTGATCCGGCATAAAAATATTGCT AATTCAATATATTGC TERM 3149 2535831 - 2535878 + T 81 -12.8 -3.28537 | opp_overlap 2535825 2535826, overlap 2535821 2535833 ATTGACAAAGTGCAC TTTGTTTATGCCGGATGCGGCG TAAA CGCCTGATCCGGCATAAAAATA TTGCTAATTCAATAT TERM 3150 2535833 - 2535876 + T 100 -15.4 -3.20494 | opp_overlap 2535825 2535826, overlap 2535821 2535831 TGACAAAGTGCACTT TGTTTATGCCGGATGCGGCG TAAA CGCCTGATCCGGCATAAAAA TATTGCTAATTCAAT cysM 2536887 - 2535976 - | cysteine synthase B TERM 3151 2536999 - 2536972 - R 89 -9.1 -4.72272 | gap 1, opp_overlap 2536972 2536989 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysU 2539816 - 2538983 - | sulfate/thiosulfate transporter subunit cysP 2540832 - 2539816 - | thiosulfate transporter subunit TERM 3152 2541123 - 2541100 - R 87 -11 -3.93038 | TAGTTCAAGACGAAA TCCTCCCCAC ACAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2541927 - 2541136 - | short chain dehydrogenase yfeT 2543115 - 2542114 - | hypothetical protein TERM 3153 2543942 - 2543924 - gH 79 -2.4 -5.1925 | gap 1 GCAGAAGCTAAAAAA CGCC-TG GATCAA CACGGCG GCTTTATTCGTCAGG murQ 2543078 - 2543974 + | N-acetylmuramic acid-6-phosphate etherase TERM 3154 2544157 - 2544173 + G 84 -7.9 -4.60487 | CGTCATTTTGACCAG CGACCAG GTG CAGGTCG TTTTTGGGCCTGGTA murP 2543978 - 2545402 + | N-acetylmuramic acid phosphotransfer permease TERM 3155 2545531 - 2545558 + T 100 -14.2 -3.767 | opp_overlap 2545531 AAGCAGTAATAAAAA GGCCAGTCAGTA ATGT TACTGCCTGGCC TTTAATCAATGAATC TERM 3156 2545558 - 2545531 - T 100 -14.2 -5.16071 | opp_overlap 2545531 AAGCAGTAATAAAAA GGCCAGTCAGTA ATGT TACTGCCTGGCC TTTAATCAATGAATC TERM 3157 2545589 - 2545579 - T 71 -6.8 -4.10331 | TCAATGAATCAGAAA CGCT TAC AGCG CCATCAACTTGTCCA SF2484 2546481 - 2545582 - | hypothetical protein TERM 3158 2545628 - 2545638 + g 72 -8.2 -3.72576 | GCGAAATAATAGCCG CCGG TTA CCGG TTTGGTGAAACGCAA TERM 3159 2546016 - 2546041 + g 74 -6 -4.54047 | opp_overlap 2546008 2546007, overlap 2546007 2546018 TGATAACCGCCACTT CGCGGCGCGT CTCTTC ACCCGCCGGG TTTTCTGTACCGTCA TERM 3160 2546503 - 2546521 + r 79 -10.3 -3.63341 | opp_overlap 2546503 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT TERM 3161 2546521 - 2546503 - R 90 -10.3 -4.20868 | opp_overlap 2546503 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT SF2485 2547152 - 2546577 - | hypothetical protein SF2486 2547662 - 2547213 - | hypothetical protein TERM 3162 2547457 - 2547441 - G 74 -2.1 -5.06816 | overlap 2547442 2547443 ACCGCTCAACAAAAA CGCCAGC ACC GCCGGAA TACCGGGAATCAGCC SF2487 2548074 - 2547649 - | putative acetyltransferase TERM 3163 2549089 - 2549078 - g 72 -5.8 -4.36914 | opp_overlap 2549078, overlap 2549079 CGTTTCGTCAGAAAA TCGC CACA GCGA TTGCTGAAGGCGTGA amiA 2548288 - 2549157 + | N-acetylmuramoyl-l-alanine amidase I TERM 3164 2549385 - 2549431 + G 100 -17.5 -3.69323 | gap 2 GCCTGCTTCCGCCAC CGCTCATCGCC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCG TTTCACTGGTAGTGC TERM 3165 2549478 - 2549489 + G 100 -3.6 -5.7946 | overlap 2549476 TGTTCCCACCAGCCA CGCG AATG TGCG TTTTTTTATTGCCGA TERM 3166 2549692 - 2549718 + G 84 -10.8 -3.81951 | opp_overlap 2549683 2549685 2549695, overlap 2549695 CTCAAACATCGCAAC GAACAGCGCGGC ATT GGCGGGCTGTTC TTTGATGATCTGAAC TERM 3167 2549695 - 2549715 + G 70 -6.7 -4.03811 | opp_overlap 2549695 2549683 2549685, overlap 2549692 AAACATCGCAACGAA CAGCGCGGC ATT GGCGGGCTG TTCTTTGATGATCTG hemF 2549161 - 2550060 + | coproporphyrinogen III oxidase TERM 3168 2550547 - 2550581 + T 71 -7.1 -4.02456 | gap 2, opp_overlap 2550567, overlap 2550575 2550577 TTCTCGCAAAACGTC GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC TTTATGCTGCTCTTT SF2491 2551664 - 2551164 - | hypothetical protein TERM 3169 2551212 - 2551244 + g 70 -4.8 -4.56597 | overlap 2551214 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCCAGCGGCCA SF2492 2552336 - 2551677 - | hypothetical protein TERM 3170 2552477 - 2552492 + H 79 -4.6 -5.21709 | opp_overlap 2552477 CAGCGGGTCAGCAAA GGGGGA CAAA TGCCCC TTTTTTCATGTCAGA TERM 3171 2552627 - 2552612 - H 74 -6.8 -4.32402 | overlap 2552624 CTGCAAGCAAAATAA GCCGCA AAAA TGCGAC CCCATGTTTACTAGC TERM 3172 2552786 - 2552763 - H 100 -7.4 -5.76949 | overlap 2552765 2552766 GACGCTGAAAAAAAA TAGGTGGGCA TTTT TGCCCACTCA CTAGCCGCAAATTTG TERM 3173 2552784 - 2552765 - H 79 -7.8 -4.52949 | overlap 2552763 2552766 CGCTGAAAAAAAATA GGTGGGCA TTTT TGCCCACT CACTAGCCGCAAATT TERM 3174 2552783 - 2552766 - H 79 -11.3 -3.30685 | overlap 2552765 2552763 GCTGAAAAAAAATAG GTGGGCA TTTT TGCCCAC TCACTAGCCGCAAAT SF2493 2553518 - 2554309 + | hypothetical protein TERM 3175 2554317 - 2554331 + F 100 -9.2 -5.14645 | opp_overlap 2554317 2554316 TGCAGTGAACACAAG CGGGCG CAA TGCCCG TTTTTATTGCCTTAT TERM 3176 2554501 - 2554485 - f 100 -7.2 -5.81412 | TGCACGCAAAAAAAA CCCGCC GGAGA AGCGGG AAATAGAGACATATC TERM 3177 2555092 - 2555102 + G 70 -4.6 -4.56978 | AGATGGATTTATGAC CCTG AAG CGGG TTTATTGTTTAGCCG SF2494 2555029 - 2555424 + | hypothetical protein TERM 3178 2555646 - 2555674 + G 72 -6.7 -4.1721 | opp_overlap 2555646 2555645 2555634, overlap 2555634 GAAGGCACTGCAAAG CGGCGACTCATTT GCG AATTAAGTCGTCG TTTTGGCGTGTCAAT SF2495 2555442 - 2555705 + | hypothetical protein TERM 3179 2556006 - 2555992 - g 72 -7.8 -3.9534 | ATGGAGATGTACAAA CAGAGC GGT GCTCCG AATCCCGATGAGTAC SF2496 2555728 - 2556270 + | hypothetical protein TERM 3180 2556302 - 2556285 - f 100 -10.5 -4.77775 | opp_overlap 2556285 ATCGGATAAAAGAAA GCCGGGA ATTA CCCCGGC TGACTTAACAATGTG TERM 3181 2556568 - 2556557 - g 71 -3 -4.75219 | GAACTATCAATAAAA TCAT CGAC ATGA AATCGGGGCCGAGCA SF2497 2556367 - 2556696 + | hypothetical protein SF2498 2557526 - 2557738 + | hypothetical protein SF2499 2557990 - 2559450 + | putative amino acid antiporter SF2500 2559472 - 2560293 + | glutamate racemase TERM 3182 2560356 - 2560344 - T 73 -7.7 -4.14511 | AACTGCACCCCAAAA GTTGG ACA CCAAC TGAGTAAGGTGCATT TERM 3183 2560399 - 2560383 - T 71 -8 -3.92373 | CATTTTATGGACAAA CCCAGT TACAT ACTGGG TAGTGCATCCAATTA SF2501 2560807 - 2560412 - | iso-IS1 ORF2 TERM 3184 2560837 - 2560852 + r 70 -2.5 -5.0538 | overlap 2560825 2560838 CAGGCGAAGAAGTTA TTCGC TTTGGC GCGAG TTTTTTAAAGTCCGG SF2502 2562998 - 2561625 - | reactivating factor for ethanolamine ammonia lyase TERM 3185 2562662 - 2562611 - GR 71 -7.8 -3.85698 | gap 1, opp_overlap 2562661, overlap 2562612 GCCGTTGTTCAGAAA GGGTTTGCGCCCCGGCTCCGTGACC GGC GATCACGGATTCGAGGTGCGG-CCC GGCGCTGGCGACGAC TERM 3186 2562661 - 2562695 + gr 76 -3.5 -4.90266 | gap 1, opp_overlap 2562611 2562612 2562682, overlap 2562663 2562682 GATTCGAGGTGCGGC CCGGCGCTG-GCGA CGACAAAA TCGCCCAGCGACTG TTTTTCCTTCATCAC TERM 3187 2562692 - 2562682 - GR 77 -6.8 -4.46212 | opp_overlap 2562682 2562663 2562661 CTGGCGACGACAAAA TCGC CCA GCGA CTGTTTTTCCTTCAT SF2503 2563452 - 2562973 - | hypothetical protein SF2504 2563872 - 2563465 - | hypothetical protein TERM 3188 2563635 - 2563649 + g 82 -11.4 -3.53761 | opp_overlap 2563634 2563631 TCAGCGCTAAATCAC CGGCGA TCA TCGCCG TTTCGCCGGGAGTTA TERM 3189 2564076 - 2564047 - R 100 -15.1 -4.27617 | opp_overlap 2564037, overlap 2564048 TATATTTCAGGAAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAGAATGA TERM 3190 2564075 - 2564048 - R 100 -18.6 -3.16088 | opp_overlap 2564037, overlap 2564047 ATATTTCAGGAAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAGAATG SF2505 2566372 - 2564093 - | malic enzyme TERM 3191 2564529 - 2564508 - G 70 -5.1 -4.4261 | gap 1, overlap 2564509 GGCTCAATACCAAAA CGACGGACAG TTT CTG-CCGCCA TCAAGGTGATCTCCG TERM 3192 2565166 - 2565145 - G 72 -10.1 -3.32769 | CGTCGAAATCAGCAA TCGGACGCG TCGC CACGCCCGA CTCCATCGCCGCTTT TERM 3193 2565811 - 2565821 + g 71 -3.2 -4.82901 | opp_overlap 2565800 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3194 2566436 - 2566408 - H 78 -6.1 -4.55697 | gap 1, opp_overlap 2566426 ACGTTCACAAATAAA GTGTGTGGGCAA CAGCCC CTGCCCACA-AC GTGGCGCACATTATT talA 2566661 - 2567611 + | transaldolase A TERM 3195 2567933 - 2567917 - g 74 -7.9 -4.13945 | AGTTGCATTCGAAAA CCCCAGG CCA CCCGGAG ATTGGCTATACGCCA tktB 2567631 - 2569634 + | transketolase SF2508 2570780 - 2569737 - | hypothetical protein TERM 3196 2570779 - 2570768 - G 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAG CGCA TGGACGGTACGACCC yffH 2571481 - 2570906 - | hypothetical protein TERM 3197 2571482 - 2571531 + r 79 -9.3 -4.03234 | overlap 2571483 GATTTGTTGCGTCAT ACCGACTCCACAGCGCGAAATGA ACAA TTATATTACGCTGTGAAGTCGGG TTTGTCTGCGCAGGC TERM 3198 2571483 - 2571530 + r 80 -12.8 -3.01726 | overlap 2571482 ATTTGTTGCGTCATA CCGACTCCACAGCGCGAAATGA ACAA TTATATTACGCTGTGAAGTCGG GTTTGTCTGCGCAGG yffG 2573528 - 2571549 - | putative oxidoreductase Fe-S binding subunit TERM 3199 2573752 - 2573774 + H 71 -7.6 -3.91792 | opp_overlap 2573749, overlap 2573752 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3200 2573752 - 2573775 + H 86 -5.2 -5.55698 | gap 1, opp_overlap 2573749, overlap 2573752 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3201 2574469 - 2574441 - H 78 -5.9 -4.81212 | opp_overlap 2574451 GTCAGTAGAAGAAAA GACCCGCGATCTC CAC GAGACCAAGCGTC GTCTGGAGGTGTTGT TERM 3202 2575240 - 2575207 - H 72 -8.7 -3.66874 | opp_overlap 2575199 2575199, overlap 2575190 CCAACGCCAGCGAAA TCGCCGTCAGTTGCG TCAC CGCGCCGGACGGCAA TCACACGGTTTATAT TERM 3203 2575712 - 2575731 + G 82 -2.8 -5.26875 | gap 1, opp_overlap 2575703, overlap 2575714 2575715 GACAATCCTGTTGTG TCTGACAGG TAC CCTGGC-GA TTTTTTCATTGCCCG TERM 3204 2576539 - 2576529 - g 70 -6.8 -4.07568 | GGGTTGGGGGTAAAA CTGG CCT CCAG CGCAAACGAAATGGC TERM 3205 2577647 - 2577630 - g 72 -6.9 -4.17906 | AACCAAATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCACCAGCAATT acrD 2575653 - 2578766 + | aminoglycoside/multidrug efflux system TERM 3206 2578806 - 2578771 - f 82 -11.4 -3.53444 | opp_overlap 2578778, overlap 2578778 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCCAATG TGTCGCCTTTTTCA ACTTTCCGATTAAGA TERM 3207 2578778 - 2578799 + F 84 -8.7 -4.70879 | opp_overlap 2578778 2578771 ATAAGCAATAAAAAA GGCGACATG CCAA TGTGTCGCC TTTTTCAACTTTCCG TERM 3208 2578799 - 2578778 - f 91 -7.3 -5.57396 | opp_overlap 2578778, overlap 2578771 ATAAGCAATAAAAAA GGCGACA TGCCAATG TGTCGCC TTTTTCAACTTTCCG TERM 3209 2578817 - 2578841 + F 74 -11.5 -2.79609 | opp_overlap 2578820 2578823, overlap 2578816 2578814 2578820 2578823 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCGGGTTCTTG CTGTTTATACTTTGT TERM 3210 2578820 - 2578838 + F 82 -11 -3.52009 | opp_overlap 2578820 2578823, overlap 2578817 2578816 2578814 2578823 CAACTTTCCGATTAA GAACCTGC TCA GCGGGTTC TTGCTGTTTATACTT TERM 3211 2579554 - 2579522 - g 72 -4.8 -4.64676 | opp_overlap 2579529 CTACCCGCAATAAAA TCACCGATGCGGCC TCTGC GGCGGCATTAATGA CTGAAATGCCTGCAA yffB 2579305 - 2579661 + | hypothetical protein dapE 2579665 - 2580792 + | succinyl-diaminopimelate desuccinylase SF2515 2580796 - 2581020 + | hypothetical protein TERM 3212 2581102 - 2581050 - T 70 -10.6 -2.57931 | gap 1, opp_overlap 2581050 2581049 2581092, overlap 2581049 2581082 CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATGG TGAA CGATC-CCTGATGCGACGCTCACGC GTCTTATCAGGCCAG ypfH 2581828 - 2581130 - | esterase YpfH ypfI 2583917 - 2581902 - | hypothetical protein TERM 3213 2582051 - 2582061 + g 79 -4.6 -4.96848 | opp_overlap 2582046 TGGTACATAACTGCG CGTC ACT GGCG TTTTTCTGTAAACGC TERM 3214 2583528 - 2583517 - G 72 -5.8 -4.38154 | AGATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA SF2518 2584795 - 2583932 - | hypothetical protein TERM 3215 2584454 - 2584417 - G 72 -9.7 -3.30338 | opp_overlap 2584425 AGAACGGCCCCATAA TGGACTGGCCCGCCCCG CAGC CGGTGCGCGTCATTCCA CGGTACATGACCAGC purC 2585676 - 2584963 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3216 2585027 - 2585063 + g 72 -5.7 -4.55295 | opp_overlap 2585040, overlap 2585029 ATCAGGCCACCGAGG CTCTGGCGGAAACGGTC TTT GTCCATTTTCTCCAGTG TTTCTTTGTCCCACA TERM 3217 2585858 - 2585885 + r 73 -4 -4.90266 | opp_overlap 2585862, overlap 2585860 2585862 CGTATCATATCAGAA AAAAGGGCCGGA TGAT TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3218 2585881 - 2585862 - R 100 -11.4 -5.34555 | opp_overlap 2585862 2585860 2585858 TCATATCAGAAAAAA GGGCCGGA TGAT TCCAGCCC TGTATTTTTACTTGC TERM 3219 2585862 - 2585881 + r 72 -9.2 -3.61182 | opp_overlap 2585862, overlap 2585860 2585858 TCATATCAGAAAAAA GGGCCGGA TGAT TCCAGCCC TGTATTTTTACTTGC nlpB 2586923 - 2585889 - | lipoprotein TERM 3220 2586063 - 2586081 + g 76 -11 -3.41878 | GCCCAGTTCCTGCCA GTCGCTGT CAG ACAGCGGC TTATAAGTTACGGCC TERM 3221 2586512 - 2586540 + g 77 -6 -4.62069 | opp_overlap 2586493, overlap 2586515 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2587818 - 2586940 - | dihydrodipicolinate synthase gcvR 2587964 - 2588536 + | glycine cleavage system transcriptional repressor bcp 2588536 - 2589006 + | thioredoxin-dependent thiol peroxidase TERM 3222 2589817 - 2589805 - g 82 -2.6 -5.35815 | opp_overlap 2589808 CAGATGAAAGAAAAA CAGC GCCTT GCCG CAAGCTGGTTTGCCA TERM 3223 2589838 - 2589850 + G 73 -9.1 -3.6682 | TGGTTTGCCAATGGC GGGGA GTC TCCCC TTTCCCTCACTCAGG hyfA 2589259 - 2589876 + | hydrogenase 4 Fe-S subunit TERM 3224 2592494 - 2592506 + G 72 -7.7 -3.95022 | CTGCTTCATTGAGAT GGGAA AAA TTCCC TTTGATGTTGCTGAA TERM 3225 2592754 - 2592769 + G 79 -2.4 -5.2189 | opp_overlap 2592752 CAATCGCAGAAAACA CGCTGG CACG CGGGCG TTTTTTACTCATTCA hyfC 2591904 - 2592851 + | hydrogenase 4 membrane subunit TERM 3226 2594028 - 2594040 + G 73 -9.1 -3.69283 | AATTACCGGTGTGCC GCCGT TCA ACGGC TTCTTCAGTAAATTC hyfD 2592868 - 2594307 + | hydrogenase 4 subunit D hyfE 2594319 - 2594969 + | hydrogenase 4 membrane subunit TERM 3227 2595864 - 2595876 + GF 100 -9.1 -4.94972 | CGGCATGTTGTCGGT TGCCG TGG CGGCA TTTTTCATTCTGGTA hyfF 2594974 - 2596560 + | hydrogenase 4 subunit F TERM 3228 2597419 - 2597433 + GF 74 -2.8 -4.89562 | TCATTTGCTCAACCT TGGC CTCTCCT GCCA TTTTGTTGGTTTTGA SF2530 2596505 - 2597848 + | large subunit of hydrogenase 3 SF2531 2597845 - 2598264 + | large subunit of hydrogenase 3 hyfH 2598274 - 2598819 + | hydrogenase 4 subunit H hyfI 2598816 - 2599574 + | hydrogenase 4 Fe-S subunit SF2534 2599504 - 2599980 + | putative protein processing element SF2535 2600007 - 2601839 + | formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons TERM 3229 2602114 - 2602089 - T 93 -10.5 -4.38712 | gap 1 TTGAGCGCCAGAAAA GCGGCAAT-CGC TGA ACGGATTGCCGC CCATAAAATTGCCCG TERM 3230 2602950 - 2602921 - T 84 -8.5 -4.62872 | opp_overlap 2602922 2602924, overlap 2602922 2602924 AGGAATCCTGAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTAT TTATTTACGTCAGGA TERM 3231 2602922 - 2602949 + T 100 -12 -4.46112 | opp_overlap 2602921 2602922 2602924, overlap 2602924 GGAATCCTGAAAAAT CAGCCCGGCGAA ACAG TTCGTCGGGCTA TTTATTTACGTCAGG TERM 3232 2602949 - 2602922 - T 82 -12 -3.37 | opp_overlap 2602922 2602924, overlap 2602921 2602924 GGAATCCTGAAAAAT CAGCCCGGCGAA ACAG TTCGTCGGGCTA TTTATTTACGTCAGG TERM 3233 2602924 - 2602947 + T 100 -14.6 -3.83744 | opp_overlap 2602922 2602921 2602924, overlap 2602922 AATCCTGAAAAATCA GCCCGGCGAA ACAG TTCGTCGGGC TATTTATTTACGTCA TERM 3234 2602947 - 2602924 - T 81 -12.4 -3.24823 | opp_overlap 2602924 2602922, overlap 2602922 2602921 AATCCTGAAAAATCA GCCCGGCGAA ACAG TTCGTCGGGC TATTTATTTACGTCA TERM 3235 2602974 - 2603009 + T 74 -8.2 -3.94877 | opp_overlap 2602977, overlap 2602975 GTCAGGAATCCTGAA AAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGA TTATTCTTGCGCGAT TERM 3236 2602975 - 2603008 + T 78 -11.7 -2.96444 | opp_overlap 2602977, overlap 2602974 TCAGGAATCCTGAAA AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG ATTATTCTTGCGCGA TERM 3237 2603006 - 2602977 - T 100 -16.5 -4.62872 | opp_overlap 2602975 2602974 AGGAATCCTGAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA AGATTATTCTTGCGC perM 2604071 - 2603010 - | putative permease SF2538 2604284 - 2605747 + | hypothetical protein SF2539 2605768 - 2606127 + | putative oxidoreductase SF2540 2607006 - 2606260 - | DNA replication initiation factor TERM 3238 2607016 - 2607058 + r 76 -7.7 -4.26393 | opp_overlap 2607012, overlap 2607022 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2608345 - 2607056 - | uracil transporter TERM 3239 2607426 - 2607400 - G 72 -8.6 -3.767 | overlap 2607415 TACCGACGCAGGAAA GCAGGATAGCGA AAA TCGCCGCCCCGC CGATAACCCAGGTAC TERM 3240 2607565 - 2607580 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3241 2608386 - 2608420 + r 83 -4.3 -5.44198 | opp_overlap 2608394, overlap 2608389 2608394 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3242 2608389 - 2608417 + r 78 -6 -4.74161 | opp_overlap 2608394, overlap 2608386 2608394 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3243 2608412 - 2608394 - R 100 -11 -5.81412 | opp_overlap 2608394 2608389 2608386 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT TERM 3244 2608394 - 2608412 + r 90 -10.3 -4.2711 | opp_overlap 2608394, overlap 2608389 2608386 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT upp 2609057 - 2608431 - | uracil phosphoribosyltransferase purM 2609366 - 2610418 + | phosphoribosylaminoimidazole synthetase TERM 3245 2610559 - 2610528 - g 100 -13.7 -3.72027 | opp_overlap 2610550 2610554, overlap 2610525 AGTTTTCAGCAATAA GGCCGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3246 2610554 - 2610566 + G 72 -10.5 -3.02144 | opp_overlap 2610528, overlap 2610550 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACGCATAC purN 2610418 - 2611056 + | phosphoribosylglycinamide formyltransferase TERM 3247 2611093 - 2611074 - f 72 -10.7 -2.78679 | opp_overlap 2611074, overlap 2611073 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3248 2611074 - 2611093 + F 100 -10.7 -4.74504 | opp_overlap 2611073 2611074 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3249 2613064 - 2613027 - g 70 -6.9 -4.10657 | overlap 2613028 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2611228 - 2613294 + | polyphosphate kinase TERM 3250 2613322 - 2613348 + G 74 -10.8 -3.23853 | overlap 2613320 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2613299 - 2614840 + | exopolyphosphatase TERM 3251 2614846 - 2614874 + F 100 -18.2 -3.6279 | CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT SF2547 2616054 - 2616356 + | IS600 ORF1 SF2548 2616392 - 2617210 + | IS600 ORF2 TERM 3252 2618274 - 2618263 - f 76 -2.2 -5.32599 | overlap 2618255 GATAAAAGAGAAAAA CCTC ACCG GAAG AAATATGCGCGAAAG SF2550 2618741 - 2618932 + | hypothetical protein SF2551 2619243 - 2619761 + | putative outer membrane lipoprotein SF2552 2619777 - 2620316 + | hypothetical protein TERM 3253 2620356 - 2620385 + T 73 -10.1 -3.41693 | opp_overlap 2620361, overlap 2620361 TGATTCTTGAAGATA AAAAACCCTCTGT AGTA ACGGAGGGTTTTG TTCATTCATAGTGCA TERM 3254 2620361 - 2620380 + T 100 -10 -4.80178 | opp_overlap 2620361, overlap 2620356 CTTGAAGATAAAAAA CCCTCTGT AGTA ACGGAGGG TTTTGTTCATTCATA TERM 3255 2620380 - 2620361 - T 100 -7.8 -5.47159 | opp_overlap 2620361 2620356 CTTGAAGATAAAAAA CCCTCTGT AGTA ACGGAGGG TTTTGTTCATTCATA guaA 2621988 - 2620411 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3256 2622050 - 2622028 - R 91 -11.3 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA ATCGGGCGA AGAGAATCAGGAGCC guaB 2623523 - 2622057 - | inositol-5-monophosphate dehydrogenase TERM 3257 2622975 - 2622989 + g 73 -4.2 -4.79667 | overlap 2622986 GTCATCAACCACCAG CGCTTT TTC AACGCG TTTTTCGTGCATTTT xseA 2623685 - 2625055 + | exodeoxyribonuclease VII large subunit SF2556 2625303 - 2625052 - | hypothetical protein engA 2626808 - 2625336 - | GTP-binding protein EngA TERM 3258 2626906 - 2626875 - R 100 -13.8 -3.90048 | opp_overlap 2626881, overlap 2626876 2626881 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3259 2626905 - 2626876 - R 100 -17.3 -2.93708 | opp_overlap 2626881, overlap 2626875 2626881 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3260 2626881 - 2626900 + r 79 -9.2 -4.11216 | opp_overlap 2626876 2626875 2626881 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3261 2626900 - 2626881 - R 95 -11.4 -4.60746 | opp_overlap 2626881, overlap 2626876 2626875 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG SF2558 2628104 - 2626926 - | outer membrane protein assembly complex subunit YfgL TERM 3262 2627352 - 2627336 - G 78 -8.7 -4.18506 | overlap 2627348 CCAGCGCGAAAACAA CGCCGTT AAC AACGACG GGAGTCGTGTCAACA TERM 3263 2627508 - 2627497 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC SF2559 2628735 - 2628115 - | hypothetical protein TERM 3264 2628278 - 2628296 + g 77 -8.2 -4.07687 | GCAGCCCACCCTTCA CCTTTGAT GGT ATCAAGGG TTTTCAGCGCGGCAT TERM 3265 2628547 - 2628559 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2630027 - 2628753 - | histidyl-tRNA synthetase TERM 3266 2629991 - 2630016 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3267 2630100 - 2630054 - R 72 -3 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCC TCAATGTTTC GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 3268 2630129 - 2630109 - R 82 -13.3 -3.00298 | opp_overlap 2630103 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2631257 - 2630130 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2632297 - 2631284 - | hypothetical protein TERM 3269 2632577 - 2632540 - R 100 -12.2 -4.42653 | gap 1, overlap 2632542 ACTTCATTCATAAAA GATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT TERM 3270 2632575 - 2632542 - R 100 -14.8 -3.82117 | gap 1, overlap 2632540 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC yfgB 2633736 - 2632582 - | hypothetical protein TERM 3271 2633498 - 2633518 + g 71 -9 -3.50832 | gap 1, overlap 2633495 TCTTCAACCACTTCC GGTGCGCGG ATTT CCGC-CACC TCTTTCAGTTTGCCG TERM 3272 2633825 - 2633794 - R 91 -8.7 -5.04249 | gap 2, opp_overlap 2633793 2633790 2633789, overlap 2633796 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2634317 - 2633886 - | nucleoside diphosphate kinase SF2565 2636581 - 2634467 - | peptidoglycan synthetase; penicillin-binding protein 1B TERM 3273 2634843 - 2634868 + g 72 -7.6 -3.96148 | gap 2 TCTTGCTTCGCCTGC GGGCAGTCAGCG GCGA CGC-G-CTGCCC TTTGTCATCCAGCCA TERM 3274 2635755 - 2635742 - G 70 -3.8 -4.60949 | overlap 2635738 CAGACCATAAACAAA CGGT TTGAGC ACCG ATCCTGGCGATCGGA SF2566 2636999 - 2636583 - | ISSfl2 ORF TERM 3275 2636636 - 2636608 - G 71 -3.2 -4.82901 | TGCGGGGTATAAAAA GTCCCG-TCGCGCA TCA TG-GCGAACAGAAC GTCGCAGCGTCGTCT TERM 3276 2637158 - 2637171 + r 72 -8.1 -3.78934 | GCGCAAGTTTGCAGA GCTGG GCTG CCAGC TTCTTCTCACCCAGC SF2567 2637780 - 2637178 - | ISSfl2 ORF TERM 3277 2637617 - 2637642 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 2637597, overlap 2637603 2637618 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 3278 2638543 - 2638501 - R 76 -11.6 -2.74292 | gap 1, opp_overlap 2638501 2638504 2638508 2638516, overlap 2638503 2638508 2638516 GAAATAAGTATATTA CAGGCAATAAAAAACCGCC GAATTT GGCGTTTTTTTATTGC-TG GTCTGGTTCGCGGCC TERM 3279 2638501 - 2638544 + r 79 -12.6 -2.90194 | opp_overlap 2638501 2638503 2638508 2638516, overlap 2638504 2638508 2638516 GAAATAAGTATATTA CAGGCAATAAAAAACCGCCG AATT TGGCGTTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 3280 2638542 - 2638503 - R 74 -10.9 -2.90382 | opp_overlap 2638501 2638504 2638508 2638516, overlap 2638501 2638508 2638516 AATAAGTATATTACA GGCAATAAAAAACCGCC GAATTT GGCGTTTTTTTATTGCT GGTCTGGTTCGCGGC TERM 3281 2638504 - 2638541 + r 90 -15.1 -2.69964 | opp_overlap 2638503 2638501 2638508 2638516, overlap 2638501 2638508 2638516 ATAAGTATATTACAG GCAATAAAAAACCGCCG AATT TGGCGTTTTTTTATTGC TGGTCTGGTTCGCGG TERM 3282 2638516 - 2638529 + r 100 -5.9 -5.84381 | opp_overlap 2638508 2638503 2638501 2638516, overlap 2638508 2638504 2638501 CAGGCAATAAAAAAC CGCCG AATT TGGCG TTTTTTTATTGCTGG TERM 3283 2638833 - 2638863 + r 71 -9.8 -3.22223 | opp_overlap 2638833 2638840, overlap 2638837 2638840 CTTTCCTTTAAAAAA CAAAAAACCGCC AAAATCA GGCGGTTATTTG TTGCTGGTCCGGTTC TERM 3284 2638863 - 2638833 - R 100 -9.8 -5.00616 | opp_overlap 2638833 2638837 2638840, overlap 2638840 CTTTCCTTTAAAAAA CAAAAAACCGCC AAAATCA GGCGGTTATTTG TTGCTGGTCCGGTTC TERM 3285 2638840 - 2638856 + r 72 -6.5 -4.25016 | opp_overlap 2638840 2638833, overlap 2638837 2638833 TTAAAAAACAAAAAA CCGCC AAAATCA GGCGG TTATTTGTTGCTGGT TERM 3286 2638856 - 2638840 - R 100 -6.5 -6.04324 | opp_overlap 2638837 2638833 2638840, overlap 2638833 TTAAAAAACAAAAAA CCGCC AAAATCA GGCGG TTATTTGTTGCTGGT TERM 3287 2638948 - 2638979 + r 79 -9 -4.10144 | gap 1, opp_overlap 2638938 2638951, overlap 2638951 GACAATACTCGCCAG TAACTCTCTTTTTGT CAA GCAA-AAGAGAGTTA TTATTGTTCTGTTAG TERM 3288 2639236 - 2639222 - R 89 -11.4 -4.15884 | opp_overlap 2639208 CCAAGTAAATAATAA CCGGAG TCT CTCCGG CGACAATTTACTGGT TERM 3289 2639285 - 2639308 + r 95 -12.4 -4.3208 | opp_overlap 2639280, overlap 2639287 CAGCAAGTAAGCCCG AATGCCGCCC TTTA GGGCGGCATA TTTTAGATTATCCGG TERM 3290 2639287 - 2639306 + r 100 -15 -3.76167 | opp_overlap 2639280, overlap 2639285 GCAAGTAAGCCCGAA TGCCGCCC TTTA GGGCGGCA TATTTTAGATTATCC sseB 2640087 - 2639311 - | enhanced serine sensitivity protein SseB TERM 3291 2639816 - 2639845 + g 83 -13 -3.02263 | opp_overlap 2639813, overlap 2639820 2639843 2639844 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCGCCTGT TERM 3292 2640188 - 2640223 + r 86 -11.8 -3.51976 | opp_overlap 2640185 2640184 2640200, overlap 2640184 2640191 AATTTGCAGAATTTG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA TTAGTTTACGCCGTT TERM 3293 2640191 - 2640220 + r 81 -13.5 -2.59569 | opp_overlap 2640185 2640184 2640200, overlap 2640188 2640184 TTGCAGAATTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATATTAGTTTACGCC pepB 2641512 - 2640229 - | aminopeptidase B TERM 3294 2640385 - 2640364 - G 70 -6.5 -4.16284 | gap 1, overlap 2640365 2640376 ATAGTTCTCAACAAA GTGCGACAGG AAG CCCGCCGC-C GTGCTCGCGCCTGCC TERM 3295 2641565 - 2641544 - R 100 -13.7 -4.4261 | opp_overlap 2641544 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTCACTCGGCT TERM 3296 2641544 - 2641565 + r 79 -11.5 -3.37522 | opp_overlap 2641544 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTCACTCGGCT yfhJ 2641771 - 2641571 - | hypothetical protein fdx 2642118 - 2641783 - | [2FE-2S] ferredoxin, electron carrer protein hscA 2643970 - 2642120 - | chaperone protein HscA TERM 3297 2643451 - 2643463 + g 76 -9.1 -3.74693 | CATGCAACCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2644502 - 2643987 - | co-chaperone HscB TERM 3298 2644582 - 2644556 - R 84 -8.7 -4.6951 | gap 1, opp_overlap 2644556 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2644921 - 2644598 - | iron-sulfur cluster assembly protein SF2576 2645324 - 2644938 - | scaffold protein yfhO 2646566 - 2645352 - | cysteine desulfurase SF2578 2647166 - 2646678 - | DNA-binding transcriptional regulator IscR TERM 3299 2647062 - 2647052 - G 75 -6.8 -4.38927 | GTTCCAGATAAGAAA GGGA AAT TCCC TGACGTTCGGAAATA TERM 3300 2647189 - 2647201 + r 91 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3301 2647251 - 2647298 + r 72 -8.6 -3.6715 | overlap 2647253 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 3302 2647253 - 2647296 + r 79 -11.2 -3.4149 | overlap 2647251 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT SF2579 2648176 - 2647436 - | putative ATP synthase beta subunit TERM 3303 2648060 - 2648097 + g 76 -7.9 -4.25104 | gap 1, overlap 2648050 2648063 GGAGTCGGGTTTCAC CAGT-GGATTAACCAGCC ACA GATTGGTTAATCCCATTG TTTTCATGGCACGGG TERM 3304 2648063 - 2648094 + g 70 -6 -4.25256 | gap 1, overlap 2648060 GTCGGGTTTCACCAG T-GGATTAACCAGCC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 3305 2648313 - 2648341 + G 79 -12.3 -3.02166 | opp_overlap 2648314, overlap 2648309 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 3306 2648340 - 2648314 - g 87 -13.6 -3.04263 | opp_overlap 2648313 2648309 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2648295 - 2649098 + | inositol monophosphatase SF2581 2649243 - 2650097 + | putative enzyme csiE 2650288 - 2651568 + | stationary phase inducible protein CsiE hcaT 2652699 - 2651560 - | putative 3-phenylpropionic acid transporter TERM 3307 2651840 - 2651824 - G 70 -10.1 -3.23216 | opp_overlap 2651824 2651827 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC TERM 3308 2652105 - 2652082 - G 86 -11 -3.9009 | overlap 2652073 2652102 AACGCAGGCCAGAAA GCGCCAGTTC TGGC GAACCAGCGC CAACCACGCAGACCA TERM 3309 2652832 - 2652821 - R 73 -2.2 -5.22794 | gap 1, opp_overlap 2652822, overlap 2652822 ACAAGCACTAAAAAA CTGCG ATC CGC-G ACGCATGTTGCAAAA hcaR 2653749 - 2652859 - | DNA-binding transcriptional regulator HcaR hcaA1 2653885 - 2655246 + | large terminal subunit of phenylpropionate dioxygenase hcaA2 2655243 - 2655761 + | 3-phenylpropionate dioxygenase subunit beta hcaC 2655761 - 2656081 + | 3-phenylpropionate dioxygenase ferredoxin subunit TERM 3310 2656531 - 2656509 - g 77 -10.4 -3.59262 | overlap 2656510 TTTCACACTGTCAAA TGCCGCCTGG TAT CCTGGCGGCG GTGGCCCGCTGTACA TERM 3311 2656530 - 2656510 - g 85 -13.9 -2.75343 | overlap 2656509 TTCACACTGTCAAAT GCCGCCTGG TAT CCTGGCGGC GGTGGCCCGCTGTAC hcaB 2656078 - 2656890 + | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase TERM 3312 2657228 - 2657247 + F 77 -10.7 -3.40371 | opp_overlap 2657223 2657222 TTATAGCAACCGGCG CGGCAGC TCGACC GCTGCCG TTGCTTGATGCACTG yphA 2658147 - 2658641 + | hypothetical protein TERM 3313 2658681 - 2658646 - T 93 -11.8 -3.72695 | opp_overlap 2658648, overlap 2658648 ATCGGCGTTAGGAAA GATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATT TTATAAATTACAGCC TERM 3314 2658648 - 2658679 + T 100 -16.6 -4.4715 | opp_overlap 2658646 2658648 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG TERM 3315 2658679 - 2658648 - T 93 -14.4 -3.44848 | opp_overlap 2658648, overlap 2658646 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG yphB 2659561 - 2658689 - | hypothetical protein yphC 2660667 - 2659573 - | putative oxidoreductase TERM 3316 2660318 - 2660308 - G 74 -8.2 -3.93985 | overlap 2660309 ACAAGAGATAGGAAA GCCG CGG CGGC AGTTCGGGCAAAAAC yphD 2661698 - 2660700 - | putative transport system permease protein TERM 3317 2661099 - 2661112 + g 70 -3.7 -4.63527 | opp_overlap 2661099, overlap 2661100 AACGGCAAAAACCGA GCGCC CGAA GGCGG TTTTTCGGCTAATGA yphE 2663234 - 2661723 - | putative ATP-binding component of a transport system TERM 3318 2662109 - 2662129 + g 74 -2.5 -5.055 | overlap 2662110 2662115 GGATGGTGGACCATT GCAGCAC ACCGTTG GTGCTGA TTTTTTGCCGATTGG TERM 3319 2662187 - 2662200 + g 70 -5.2 -4.41548 | overlap 2662174 GCCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAG yphG 2667437 - 2664336 - | hypothetical protein yphH 2667735 - 2668928 + | putative NAGC-like transcriptional regulator TERM 3320 2668948 - 2668965 + T 77 -11.3 -3.23216 | opp_overlap 2668948 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCATAAAC TERM 3321 2668965 - 2668948 - T 87 -11.3 -4.00066 | opp_overlap 2668948 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCATAAAC glyA 2670379 - 2669126 - | serine hydroxymethyltransferase TERM 3322 2671147 - 2671131 - g 72 -5.7 -4.50661 | opp_overlap 2671133, overlap 2671133 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GTTGGGAAGGTACTC hmpA 2670706 - 2671896 + | nitric oxide dioxygenase glnB 2672279 - 2671941 - | nitrogen regulatory protein P-II 1 yfhA 2673674 - 2672340 - | putative 2-component transcriptional regulator TERM 3323 2673049 - 2673039 - G 72 -8.2 -3.74251 | overlap 2673040 GACAGCGCCAGTAAA CGCG CCA CGCG CATGACCAAACAGCT TERM 3324 2673402 - 2673377 - G 76 -4 -5.01811 | gap 1, overlap 2673378 TGAGGAAACTAAAAA CGCC-CTGCTG TGTTG CAGCAACGGCA TCGGGGATAGAACCA yfhG 2674377 - 2673664 - | hypothetical protein TERM 3325 2674530 - 2674516 - R 72 -2.8 -5.01553 | opp_overlap 2674518, overlap 2674518 AACTGACAAATAAAA TAGCCT GAT AGGATA GGCTGTTAGCATTAT yfhK 2676032 - 2674542 - | putative 2-component sensor protein TERM 3326 2675172 - 2675182 + g 93 -8.2 -4.90266 | overlap 2675157 GCCCTCGCGCATACT CGCC AGT GGCG TTTTTAATTCATGAG TERM 3327 2676057 - 2676027 - G 100 -16.3 -2.91681 | opp_overlap 2676030 2676034, overlap 2676030 2676034 GGGGAAGTTCAGATA CAACAAAGCCGGG AATTA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3328 2676030 - 2676054 + g 100 -15.8 -3.32844 | opp_overlap 2676027 2676030 2676034, overlap 2676034 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3329 2676054 - 2676030 - G 100 -15.8 -3.60412 | opp_overlap 2676030 2676034, overlap 2676027 2676034 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3330 2676034 - 2676050 + r 90 -10.8 -4.32177 | opp_overlap 2676030 2676027 2676034, overlap 2676030 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3331 2676050 - 2676034 - R 93 -10.8 -4.42974 | opp_overlap 2676034 2676030, overlap 2676030 2676027 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3332 2676409 - 2676390 - R 71 -10 -3.15252 | AAATCAATCATTTAA GTGTCGCC AGAA AGCGACAC GGTAAACCACCCATT TERM 3333 2676449 - 2676466 + r 70 -9.1 -3.45737 | opp_overlap 2676449 TACAGACACAAAAAA GCTCCCG GAGT TGGGAGC TTATGATAGTGGTTG TERM 3334 2676466 - 2676449 - R 100 -8.4 -5.4492 | opp_overlap 2676449 TACAGACACAAAAAA GCTCCC GGAGTT GGGAGC TTATGATAGTGGTTG purL 2680414 - 2676527 - | phosphoribosylformylglycinamidine synthase TERM 3335 2679218 - 2679229 + g 74 -2.2 -5.14163 | overlap 2679212 2679211 CAGCTCTTCGCCATT GTGG CTGT TCAC TTTTTCTTCATAAGT TERM 3336 2680529 - 2680518 - H 73 -4.4 -4.86731 | TGCGTGGAAATAAAA TCAC CATC GTGA ATTAGCAACGCGTGC TERM 3337 2680692 - 2680682 - H 75 -2.6 -5.1848 | opp_overlap 2680682 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG yfhD 2680811 - 2682229 + | putative transglycosylase yfhC 2682762 - 2682226 - | tRNA-specific adenosine deaminase yfhB 2683422 - 2682787 - | hypothetical protein TERM 3338 2683053 - 2683038 - G 74 -6.1 -4.46112 | overlap 2683050 GCGTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 3339 2683418 - 2683396 - G 86 -6.2 -5.16572 | overlap 2683399 2683401 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT TERM 3340 2684368 - 2684336 - g 72 -7.7 -3.94877 | ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCTCAGGGAATGTTA yfhH 2683631 - 2684479 + | putative DNA-binding transcriptional regulator SF2609 2685372 - 2684932 - | DNA-invertase TERM 3341 2685461 - 2685486 + H 79 -2.7 -5.40072 | gap 1, opp_overlap 2685461 2685475 2685480, overlap 2685474 2685484 TTCCATGGGAATACA CAGT-CATTATA AAA TAGAATGTACTG TTTTTTTAAAGAAAA TERM 3342 2685515 - 2685475 - H 79 -8 -4.48072 | gap 1, opp_overlap 2685461 2685474 2685484, overlap 2685461 2685480 ACAGTCATTATAAAA TAGAATGTACTGTTTTTTT AAAG AAAAAAACAGTACATTG-A GATATGATTTGGATC TERM 3343 2685511 - 2685480 - H 100 -14.8 -4.04187 | opp_overlap 2685461 2685474 2685484, overlap 2685461 2685475 CATTATAAAATAGAA TGTACTGTTTTTTT AAAG AAAAAAACAGTACA TTGAGATATGATTTG ipaH_7 2685873 - 2687699 + | invasion plasmid antigen TERM 3344 2687764 - 2687741 - T 93 -10.2 -4.58395 | opp_overlap 2687753 2687754, overlap 2687743 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 3345 2687762 - 2687743 - T 100 -15 -3.90762 | opp_overlap 2687753 2687754, overlap 2687741 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT SF2611 2688502 - 2687879 - | putative tail component of prophage CP-933K SF2612 2689669 - 2688803 - | putative tail fiber protein TERM 3346 2689759 - 2689741 - R 73 -7.4 -4.13995 | overlap 2689744 TCGCGATAAATTAAA TCAGGAAG AAC CTTCCGGA GAGGCGGGCCATTCA SF2613 2690229 - 2689741 - | putative tail fiber assembly protein SF2614 2690807 - 2690289 - | hypothetical protein SF2615 2690871 - 2691236 + | insertion sequence 2 OrfA protein SF2617 2693012 - 2691933 - | putative tail fiber protein SF2616 2691194 - 2692099 + | insertion element IS2 transposase InsD SF2618 2693604 - 2692999 - | hypothetical protein SF2619 2694073 - 2693606 - | putative bacteriophage protein SF2620 2694368 - 2694670 + | IS600 ORF1 SF2621 2694811 - 2695524 + | IS600 ORF2 TERM 3347 2695571 - 2695591 + T 82 -11.2 -3.64488 | overlap 2695569 CAGTACACCTCATTT TACAGCCC CGTCC GGGCTGTA TGTTTTCACCAGCTT SF2622 2696221 - 2695565 - | hypothetical protein TERM 3348 2695697 - 2695754 + g 100 -13.6 -4.91977 | gap 2, opp_overlap 2695718 AACTGAATCACGCCA GGCTTTCTGCTCGTCGATAATCCGCCGG ATCT CAGGC-G-TTATCGGCAGGCGGAAAGCC TTTTGTGTTTTCATA SF2623 2696664 - 2696263 - | hypothetical protein TERM 3349 2696376 - 2696395 + g 78 -5.7 -4.81249 | gap 1, opp_overlap 2696376 CCAGCTGGATAACGA GCTCCGGC CACTC GCCG-AGC TTTTTACCTTTGAGG TERM 3350 2696473 - 2696484 + g 79 -4.4 -4.93696 | GCTGAAATCGATACG GAGA TAGT TCTC TTTTTCGTATTTGGA yfhL 2696879 - 2697139 + | hypothetical protein TERM 3351 2697136 - 2697166 + T 76 -9.3 -3.71284 | opp_overlap 2697135 2697136 CCACGCGGATAAAAT TTAATATTCTACT CTGGA AGTAGAGTATTAA TTATATTACTGGGAA TERM 3352 2697313 - 2697284 - T 100 -13.6 -3.78022 | opp_overlap 2697284 TTTATAGTTATTAAA GGCGCGTCCGAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT TERM 3353 2697809 - 2697773 - T 100 -10.9 -4.83759 | opp_overlap 2697773 2697779 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCC GTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3354 2697773 - 2697809 + T 95 -10.9 -4.56597 | opp_overlap 2697773, overlap 2697779 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCC GTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3355 2697779 - 2697803 + T 73 -4.1 -4.77757 | opp_overlap 2697773, overlap 2697773 AGTTAAAAAGTAAAA CCCCCGTTC CTTACCC GTTCGGGGG TTTTACTTTTTAAAG acpS 2698213 - 2697833 - | 4'-phosphopantetheinyl transferase TERM 3356 2698089 - 2698071 - G 78 -7.4 -4.36914 | opp_overlap 2698071 CGCTTCGCCAGAAAA CGCACC GGCTGGT GGTGCG TTTTCCAGATTGCCC TERM 3357 2698071 - 2698089 + g 74 -8.1 -4.14392 | opp_overlap 2698071 CGCTTCGCCAGAAAA CGCACCG GCTGG TGGTGCG TTTTCCAGATTGCCC pdxJ 2698944 - 2698213 - | pyridoxal phosphate biosynthetic protein PdxJ recO 2699684 - 2698956 - | DNA repair protein RecO TERM 3358 2699107 - 2699117 + g 72 -6.8 -4.21275 | overlap 2699089 2699088 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2700601 - 2699696 - | GTP-binding protein Era TERM 3359 2700040 - 2700030 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC TERM 3360 2700509 - 2700520 + g 70 -5.8 -4.16284 | GGTGATGGAGATTTT CTGC CCCA GCAG TTTGTTCAACAATGT rnc 2701278 - 2700598 - | ribonuclease III TERM 3361 2701537 - 2701505 - R 100 -21.5 -4.07877 | TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGCTATTA lepB 2702524 - 2701550 - | lsignal peptidase I TERM 3362 2702086 - 2702102 + g 76 -9.5 -3.76373 | overlap 2702064 GTAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2704339 - 2702540 - | GTP-binding protein LepA TERM 3363 2702638 - 2702651 + g 74 -2.3 -5.07486 | overlap 2702636 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGGCTG TERM 3364 2704544 - 2704527 - R 91 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2705016 - 2704537 - | SoxR reducing system protein RseC rseB 2705969 - 2705013 - | periplasmic negative regulator of sigmaE TERM 3365 2705910 - 2705883 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 2706619 - 2705969 - | anti-RNA polymerase sigma factor SigE TERM 3366 2706345 - 2706357 + g 78 -7.7 -4.43189 | opp_overlap 2706353, overlap 2706353 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTCTGCCATTGAT rpoE 2707227 - 2706652 - | RNA polymerase sigma factor RpoE TERM 3367 2707658 - 2707636 - R 77 -3.5 -5.20222 | opp_overlap 2707657 ATTAAACAAAGAAAA TGAATACTC TCCCT GAACATTCA TGTGACGTGTTGATT TERM 3368 2707782 - 2707802 + r 76 -8.9 -3.73775 | overlap 2707785 TCAACATTTTATGCC CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACTGAC TERM 3369 2709274 - 2709261 - R 75 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA yfiC 2710099 - 2709242 - | putative enzyme TERM 3370 2709358 - 2709332 - G 88 -12.4 -3.58269 | overlap 2709356 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 3371 2710017 - 2710004 - G 77 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 3372 2710548 - 2710537 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT srmB 2710111 - 2711445 + | ATP-dependent RNA helicase SrmB TERM 3373 2711449 - 2711474 + T 100 -15.5 -5.40072 | opp_overlap 2711447 2711446 ACAGAAGAGTAATCT CAATGCCGGGT TTAA GCCCGGCATTG TTTTTTTACGCAACC yfiE 2712406 - 2711480 - | putative LYSR-type transcriptional regulator TERM 3374 2711947 - 2711930 - G 75 -6.9 -4.4009 | opp_overlap 2711929, overlap 2711933 CCCTACGCGATAAAA GACGCCG ACAT CGGCCTC ATCATTCAGTAGCGC TERM 3375 2712017 - 2712003 - G 70 -7.1 -4.05446 | GCCTGCAACGATAAA CGCAC TTTTG GTGCG CGTTGCCGAAAACGC TERM 3376 2712275 - 2712289 + g 70 -5 -4.57569 | AAAAGTCACCGTCGA TTGTGT ACA GCACAA TTTTTGCGAAGCTCG TERM 3377 2712310 - 2712290 - G 82 -11.3 -3.46602 | TTGTGTACAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC yfiK 2712464 - 2713051 + | neutral amino-acid efflux protein TERM 3378 2713028 - 2713040 + T 72 -4.8 -4.66537 | CTGTTGCTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAACGAA TERM 3379 2713061 - 2713084 + T 100 -16.8 -3.22884 | opp_overlap 2713061, overlap 2713053 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 3380 2713084 - 2713061 - T 100 -16.8 -5.65513 | opp_overlap 2713053 2713061 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC yfiD 2713490 - 2713107 - | autonomous glycyl radical cofactor GrcA TERM 3381 2713634 - 2713618 - H 77 -3.7 -5.24551 | TTAAATCAACAAAAA CCACA CATCGAT TGTGG TCGTAAATGGATTTT TERM 3382 2714257 - 2714274 + G 100 -9.1 -5.18726 | opp_overlap 2714253 2714256 AGCCTGATTAACCAG CACCGCG AAGG CGTGGTG TTTTTGTTGTGGGGA ung 2713795 - 2714346 + | uracil-DNA glycosylase TERM 3383 2714525 - 2714498 - T 90 -13.4 -3.5394 | opp_overlap 2714496 2714499 2714522 2714524, overlap 2714499 AAATTTGCGGGGAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 3384 2714524 - 2714499 - T 95 -16.9 -2.72043 | opp_overlap 2714496 2714499 2714522, overlap 2714498 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 3385 2714499 - 2714524 + T 88 -14.7 -3.0169 | opp_overlap 2714499 2714498, overlap 2714496 2714522 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT yfiF 2715569 - 2714532 - | putative methyltransferase TERM 3386 2715368 - 2715356 - G 71 -9.1 -3.53012 | opp_overlap 2715336 CCGGCGCGCGGGAAA CCGTG CGC CACGG CGAATCTTCCCACTT trxC 2715776 - 2716195 + | thioredoxin 2 TERM 3387 2716202 - 2716222 + F 100 -14.7 -4.50976 | TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 3388 2716235 - 2716245 + F 70 -2.4 -5.02476 | overlap 2716243 CCGTTTTCTCCTCTG CGAC AAT GGCG TTTTTTCGACGCTCT TERM 3389 2716297 - 2716322 + G 70 -3.9 -4.63218 | overlap 2716300 CTCCAGTTACGCGCC GAGCGTATTGC GCGC GCAACACGTCC TTTTCTTGCCCGCGG TERM 3390 2716477 - 2716461 - g 72 -10.1 -3.3782 | opp_overlap 2716460 2716458 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA yfiP 2716240 - 2716962 + | hypothetical protein TERM 3391 2717404 - 2717446 + G 70 -5.5 -4.42806 | overlap 2717389 2717400 CTGGCAAGGTCTGAA TGCCAGCTTTTCGCCTGTG CCGAT TAAACGCGGCAAGCTGGCG TTTATTTCGCAATCG TERM 3392 2718685 - 2718675 - g 77 -6.8 -4.58395 | overlap 2718676 2718677 TCGATCGCGTAAAAA TGGC CTG GCCA CAGGCGCGGGTCCAC yfiQ 2716994 - 2719654 + | hypothetical protein pssA 2719768 - 2721123 + | phosphatidylserine synthase TERM 3393 2721146 - 2721130 - f 72 -9.4 -3.51032 | opp_overlap 2721130 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 3394 2721130 - 2721146 + F 100 -9.4 -5.04249 | opp_overlap 2721130 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG yfiM 2721220 - 2721492 + | hypothetical protein kgtP 2722787 - 2721489 - | alpha-ketoglutarate transporter TERM 3395 2723042 - 2723030 - H 70 -9.1 -3.4072 | overlap 2723032 TATGTGGGAGTATAA GACGC GCA GCGTC GCATCAGGCATTTTT TERM 3396 2723096 - 2723077 - H 100 -13.6 -4.74103 | opp_overlap 2723077 GCGCCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTTCGCTTAGTTTGA TERM 3397 2723077 - 2723096 + H 100 -13.6 -3.83214 | opp_overlap 2723077 GCGCCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTTCGCTTAGTTTGA TERM 3398 2723243 - 2723264 + H 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 3399 2725732 - 2725744 + H 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3400 2726286 - 2726310 + H 71 -8 -3.93061 | gap 1, opp_overlap 2726292 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 3401 2726349 - 2726386 + H 93 -6.3 -5.68438 | opp_overlap 2726345 2726351, overlap 2726351 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 3402 2726384 - 2726351 - H 75 -6.7 -4.49756 | opp_overlap 2726349 2726351, overlap 2726345 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 3403 2726351 - 2726384 + H 86 -8.9 -4.47052 | opp_overlap 2726345 2726351, overlap 2726349 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT SF2651 2728353 - 2728775 + | IS4 orf TERM 3404 2728786 - 2728757 - T 89 -9.3 -4.59109 | overlap 2728759 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCTCAAGGGCT TERM 3405 2728784 - 2728759 - T 100 -16.3 -3.90762 | overlap 2728757 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCTCAAGGG SF2652 2729563 - 2728826 - | outer membrane protein assembly complex subunit YfiO TERM 3406 2729663 - 2729653 - H 74 -8.2 -3.8766 | GCACACTATATTAAA CGGC AAA GCCG TAAAACCCCAACGAT rluD 2729698 - 2730678 + | 23S rRNA pseudouridine synthase D yfiH 2730675 - 2731406 + | hypothetical protein TERM 3407 2732340 - 2732360 + G 72 -7.5 -3.86822 | opp_overlap 2732340 AACGATCTTGCCAAA CAGGAAGGC AAC GTCATCCTG TTTATCGACGAATTA clpB 2731536 - 2734109 + | protein disaggregation chaperone TERM 3408 2734135 - 2734164 + T 89 -9.3 -4.59109 | overlap 2734137 AGCCCTTCGGGGCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3409 2734137 - 2734162 + T 100 -16.3 -3.90762 | overlap 2734135 CCCTTCGGGGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SF2656 2735492 - 2734146 - | IS4 orf TERM 3410 2735507 - 2735482 - G 100 -9.8 -5.61596 | opp_overlap 2735482 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3411 2735482 - 2735507 + g 73 -9.1 -3.61398 | opp_overlap 2735482 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 3412 2735551 - 2735575 + H 95 -2.7 -5.94214 | TGATCCTTAACTGAT CGGCATTACAG CCC TTGAGCTGCCG TTTTTTTATTCTGTT TERM 3413 2736100 - 2736067 - g 72 -6.7 -4.1822 | gap 1, overlap 2736068 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG yfiA 2735806 - 2736147 + | translation inhibitor protein RaiA TERM 3414 2736173 - 2736188 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC pheL 2736251 - 2736298 + | leader peptide of chorismate mutase-P-prephenate dehydratase TERM 3415 2736367 - 2736347 - f 87 -10.3 -4.03167 | opp_overlap 2736347 GAAGACGAACAATAA GGCCTCCCA AAT CGGGGGGCC TTTTTTATTGATAAC TERM 3416 2736347 - 2736367 + F 100 -11.8 -5.5112 | opp_overlap 2736347 GAAGACGAACAATAA GGCCTCCC AAATC GGGGGGCC TTTTTTATTGATAAC pheA 2736397 - 2737557 + | bifunctional chorismate mutase/prephenate dehydratase TERM 3417 2737562 - 2737595 + T 72 -10.3 -2.83073 | opp_overlap 2737564 2737565, overlap 2737561 2737558 2737565 ATCCAACCTGATGAA AAGGTGCCGGATGAT GTGA ATCATCCGGCACTGG ATTATTACTGGCGAT TERM 3418 2737593 - 2737564 - T 100 -15.1 -4.28361 | opp_overlap 2737562 2737561 2737558 2737565, overlap 2737565 CCAACCTGATGAAAA GGTGCCGGATGAT GTGA ATCATCCGGCACT GGATTATTACTGGCG TERM 3419 2737592 - 2737565 - T 100 -18.6 -3.16534 | opp_overlap 2737565 2737562 2737561 2737558, overlap 2737564 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC TERM 3420 2737565 - 2737592 + T 100 -18.6 -2.67428 | opp_overlap 2737564 2737565, overlap 2737562 2737561 2737558 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC tyrA 2738721 - 2737600 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 3421 2737895 - 2737909 + g 71 -2.8 -4.77165 | GAGAGCGCCAGAAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGG aroF 2739802 - 2738732 - | phospho-2-dehydro-3-deoxyheptonate aldolase yfiL 2740012 - 2740377 + | hypothetical protein SF2663 2740527 - 2741045 + | hypothetical protein TERM 3422 2741775 - 2741759 - f 78 -6.5 -4.64766 | overlap 2741761 TTTACAGGCCAAAAA TGCGCAG CTT CTGCGTA CCGCGCTACATGACC yfiB 2742276 - 2742758 + | putative outer membrane lipoprotein TERM 3423 2742804 - 2742783 - T 100 -11.5 -5.82281 | opp_overlap 2742783 2742801 2742803 AAACAGACAAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 2743182 - 2742835 - | 50S ribosomal protein L19 trmD 2743991 - 2743224 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2744570 - 2744022 - | 16S rRNA-processing protein rpsP 2744837 - 2744589 - | 30S ribosomal protein S16 TERM 3424 2744893 - 2744861 - R 89 -9.2 -4.63218 | gap 1, opp_overlap 2744864, overlap 2744864 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 3425 2744891 - 2744864 - R 100 -12 -4.43307 | opp_overlap 2744864, overlap 2744861 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 2746335 - 2744974 - | signal recognition particle protein TERM 3426 2746596 - 2746582 - g 85 -2.7 -5.40072 | overlap 2746584 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC SF2671 2746427 - 2747293 + | hypothetical protein yfjD 2747917 - 2748600 + | putative transport protein TERM 3427 2748603 - 2748636 + T 75 -9.5 -3.61398 | opp_overlap 2748607, overlap 2748604 2748607 TGTGGCGGAGTAACG AAAACGGCCCTGCAT TCGC ATGCAGGGCCGTGAA TTATTACGAAAACAG TERM 3428 2748604 - 2748635 + T 82 -13 -2.76696 | opp_overlap 2748607, overlap 2748603 2748607 GTGGCGGAGTAACGA AAACGGCCCTGCAT TCGC ATGCAGGGCCGTGA ATTATTACGAAAACA TERM 3429 2748607 - 2748632 + T 100 -19.1 -2.6563 | opp_overlap 2748607, overlap 2748604 2748603 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA TERM 3430 2748632 - 2748607 - T 100 -19.1 -4.45544 | opp_overlap 2748607 2748604 2748603 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA grpE 2749248 - 2748655 - | heat shock protein GrpE ppnK 2749371 - 2750249 + | inorganic polyphosphate/ATP-NAD kinase recN 2750335 - 2751996 + | recombination and repair protein smpA 2752334 - 2752486 + | small membrane protein A TERM 3431 2752506 - 2752545 + T 93 -12.4 -3.70444 | gap 1, opp_overlap 2752518, overlap 2752518 AAAGTTGCTCTCAAA GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC TGTTATTTATTCGCT TERM 3432 2752518 - 2752534 + T 100 -12.3 -5.46276 | opp_overlap 2752518, overlap 2752506 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT TERM 3433 2752534 - 2752518 - T 100 -12.3 -5.10077 | opp_overlap 2752506 2752518 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT SF2677 2752838 - 2752548 - | hypothetical protein TERM 3434 2752664 - 2752682 + g 74 -3 -4.96773 | overlap 2752666 CGCTTAGTTTTGCCG GACGGC TGTAAAT GCCGAC TTTGTTTTTAGTTAA TERM 3435 2752762 - 2752787 + g 74 -9.8 -3.45118 | gap 1, overlap 2752763 TCAACCGTCGCGCCC T-CCTGCAGCG TCACT CGCTGCAGGTA TTGCTTCTCAGGTAG TERM 3436 2752763 - 2752785 + g 100 -14.9 -3.29593 | overlap 2752762 CAACCGTCGCGCCCT CCTGCAGCG TCACT CGCTGCAGG TATTGCTTCTCAGGT SF2678 2753265 - 2752828 - | hypothetical protein TERM 3437 2753827 - 2753815 - g 70 -5.5 -4.35524 | GGTGCAAAGTGAAAA TCGGC GTC GCCAA AGGTAAAAAACAGCA smpB 2753436 - 2753918 + | SsrA-binding protein TERM 3438 2754232 - 2754217 - f 72 -3.2 -5.08011 | overlap 2754219 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 3439 2754568 - 2754543 - f 93 -16.1 -3.06737 | opp_overlap 2754543, overlap 2754534 GATGAAGTCCTAAGA GCCCGCACGGC GCAA GCCCTGCGGGC TTTTTTGTGCTCCGA TERM 3440 2754543 - 2754568 + F 100 -16.1 -5.31275 | opp_overlap 2754543 2754534 GATGAAGTCCTAAGA GCCCGCACGGC GCAA GCCCTGCGGGC TTTTTTGTGCTCCGA TERM 3441 2755598 - 2755588 - g 72 -8.2 -3.81951 | CTGGAGATGATGAAA CCGC TAA GCGG CAACCGAGAATTTAT SF2680 2754700 - 2755941 + | integrase insA 2756141 - 2756416 + | IS1 ORF1 insB 2756443 - 2756838 + | IS1 ORF2 TERM 3442 2757138 - 2757121 - g 79 -4.1 -5.02606 | CAGTAAACAACAAAA TCAGCAG ACGT CTTCTGA ACGTGAACTGGAGAT SF2683 2756948 - 2757256 + | IS3 ORF1 TERM 3443 2757530 - 2757503 - g 75 -4.7 -4.74103 | overlap 2757504 2757505 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC SF2684 2757253 - 2758119 + | IS3 ORF2 TERM 3444 2758153 - 2758174 + F 100 -11.6 -5.03715 | opp_overlap 2758152 2758151 TGGGTAGGATCAATT TGCCCGCT TGGCAT AGCGGGCA TTTTTTCCAGGTACT TERM 3445 2759026 - 2759016 - f 74 -6.8 -4.37092 | ATGTTTTCTATAAAA CCAG GAC CTGG AAATTTACCTATCGA TERM 3446 2761259 - 2761296 + F 71 -7 -4.10552 | opp_overlap 2761259, overlap 2761262 2761263 2761264 2761266 CTATTTATAATTTAA TGTTATATCTGCCCCG ATAAAA CGGGGCAGATAATATG TTTAGTTTACTAACG TERM 3447 2761262 - 2761294 + F 82 -11.5 -3.64541 | gap 1, opp_overlap 2761259, overlap 2761259 2761263 2761264 2761266 TTTATAATTTAATGT TA-TATCTGCCCCG ATAAAA CGGGGCAGATAATA TGTTTAGTTTACTAA TERM 3448 2761263 - 2761292 + F 85 -12.2 -3.39117 | opp_overlap 2761259, overlap 2761262 2761259 2761264 2761266 TTATAATTTAATGTT ATATCTGCCCCG ATAAAA CGGGGCAGATAA TATGTTTAGTTTACT TERM 3449 2761264 - 2761291 + F 90 -15.7 -2.62386 | opp_overlap 2761259, overlap 2761263 2761262 2761259 2761266 TATAATTTAATGTTA TATCTGCCCCG ATAAAA CGGGGCAGATA ATATGTTTAGTTTAC TERM 3450 2761266 - 2761289 + F 84 -13.9 -2.83953 | opp_overlap 2761259, overlap 2761264 2761263 2761262 2761259 TAATTTAATGTTATA TCTGCCCCG ATAAAA CGGGGCAGA TAATATGTTTAGTTT TERM 3451 2762165 - 2762182 + GF 72 -9.1 -3.53012 | TTCCGCCATCCACTG GCGCGTC GCCC GATGCGC TTTGCCGCGCCGCCG SF2686 2761589 - 2762521 + | hypothetical protein TERM 3452 2763097 - 2763077 - gf 72 -2.6 -4.9218 | overlap 2763078 2763079 CAGTGAGCATAAAAA CGGCGTG-GT GAT ACGCAC-CCG TCAGGGCGGTGAATA TERM 3453 2763170 - 2763188 + GF 70 -5.2 -4.38927 | opp_overlap 2763169, overlap 2763171 CCGGCTGGTGAAAAT GCTCGG CCTCGAA CCGGGC TTTATTATCTGCCCG ygaF 2762475 - 2763809 + | hypothetical protein TERM 3454 2763925 - 2763903 - f 79 -10.6 -3.65046 | overlap 2763914 GCTGGACGCCAACAA TGGTGAAGTC ATC GACGTCACCA ATCCGGCGAACGGCG TERM 3455 2764337 - 2764389 + F 100 -15.6 -3.50393 | gap 2, opp_overlap 2764330 2764331 CCCGTAAAGCCGGTC CGGCG-CTGGC-GGCAGGCTGCACCA TGG TGCTGAAGCCCGCCAGTCAGACGCCG TTCTCTGCGCTGGCG TERM 3456 2765691 - 2765655 - g 70 -4.2 -4.61527 | opp_overlap 2765679, overlap 2765644 2765656 AAAACGCGGTAAAAA TCGCCCGCGCCGCCAC CAAAC GTAGCGGCACCATCGC TTTTAGCGGCGAGTA gabT 2765447 - 2766574 + | 4-aminobutyrate aminotransferase TERM 3457 2766596 - 2766608 + F 70 -9.1 -3.30124 | opp_overlap 2766571, overlap 2766595 2766605 CCCCATGCAGGAGGC GACGC TGC GCGTC TTGTCCGGCCTACGA TERM 3458 2766661 - 2766632 - f 90 -14.3 -3.25072 | opp_overlap 2766605 2766630, overlap 2766627 2766641 CCTACGAGAATCCAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC AATCTGTACGTGAAC gabP 2766812 - 2768026 + | gamma-aminobutyrate transporter TERM 3459 2768438 - 2768461 + G 70 -6.8 -4.07568 | gap 1, overlap 2768440 ATCGGGTGGCGTCTA TGTCAGAGCAG GAG CTGCTC-GATA TTTTCGACGCCCGCG ygaE 2768233 - 2768895 + | DNA-binding transcriptional regulator CsiR ygaU 2769345 - 2768896 - | hypothetical protein TERM 3460 2768923 - 2768945 + g 100 -10.6 -4.63184 | overlap 2768924 2768940 AATACGCAACACTTG CCCCGGATAA ATT TTATCCGGGC TTTTTAGCATCGGTT TERM 3461 2768924 - 2768944 + g 95 -14.1 -3.37188 | overlap 2768923 2768940 ATACGCAACACTTGC CCCGGATAA ATT TTATCCGGG CTTTTTAGCATCGGT TERM 3462 2768961 - 2768975 + g 71 -2.8 -4.77567 | overlap 2768963 TTTTTAGCATCGGTT TATTCG CTT CGAAGA TTTTATTGTACAGAT TERM 3463 2769413 - 2769394 - R 81 -12.8 -3.29649 | AGTGTAGCAGAGGAA CGCGGCGC GTTA ACGCCGCG GGGGTGAGCACAGGT TERM 3464 2769638 - 2769626 - R 78 -6.3 -4.58395 | CTCATTGTTTAAAAA GAGAT TTT ATCTC TTAAGCGTAGTAATT SF2693 2770593 - 2769688 - | insertion element IS2 transposase InsD SF2694 2770916 - 2770551 - | insertion sequence 2 OrfA protein SF2695 2771106 - 2771405 + | hypothetical protein ygaP 2771415 - 2771939 + | hypothetical protein stpA 2772390 - 2771986 - | DNA binding protein, nucleoid-associated TERM 3465 2772106 - 2772123 + g 83 -6.2 -5.00616 | overlap 2772105 AGTGAATTTATATTT CGCCGG ACGCGG CTGGCG TTTTTTACCAGCACG TERM 3466 2772694 - 2772670 - H 83 -6.5 -4.92791 | opp_overlap 2772670 2772675, overlap 2772675 TATAACAGAATAAAA GAAAACACC CCTCACT GGTGCTTTC TGCTGTTAATGTACA TERM 3467 2772689 - 2772675 - H 79 -2.8 -5.31091 | opp_overlap 2772675 2772670, overlap 2772670 CAGAATAAAAGAAAA CACC CCTCACT GGTG CTTTCTGCTGTTAAT SF2698 2773058 - 2773507 + | hypothetical protein TERM 3468 2773516 - 2773542 + T 93 -12.2 -3.68619 | overlap 2773518 AGCCTGACTCTTCTT TTCGCGACTGGC ATC GCCAGTCGCGTC TTTAACTGGCTTCGC TERM 3469 2773518 - 2773540 + T 100 -19.2 -3.42283 | overlap 2773516 CCTGACTCTTCTTTT CGCGACTGGC ATC GCCAGTCGCG TCTTTAACTGGCTTC ygaC 2773888 - 2773544 - | hypothetical protein TERM 3470 2773710 - 2773720 + g 70 -5.4 -4.43681 | overlap 2773696 2773692 2773693 GGTTCAGCCAGTGTT GAAC TGC GTTC TTTTAATGTTGGATG ygaM 2774028 - 2774270 + | hypothetical protein TERM 3471 2774401 - 2774421 + F 100 -12.6 -4.89063 | opp_overlap 2774391 AATACGCGTCTTTGA CCCCGAAG CCTGT CTTCGGGG TTTCTTTTTGCCTGG nrdH 2774617 - 2774862 + | glutaredoxin-like protein nrdI 2774859 - 2775269 + | ribonucleotide reductase stimulatory protein TERM 3472 2775764 - 2775774 + G 79 -2.4 -5.17353 | CAGCAGCGCGGCGAA CTGG TTT CCTG TTTTTTGCTGCGTAT TERM 3473 2776536 - 2776563 + G 95 -14.2 -3.54129 | gap 1, overlap 2776536 ATTCCCCCGATTTTT CC-CGCACGGTAG AGA CTGCCGTGCGCGG TTTAACGGCGGTGTC TERM 3474 2776536 - 2776562 + G 90 -14.4 -2.72263 | overlap 2776536 ATTCCCCCGATTTTT CCCGCACGGTAG AGA CTGCCGTGCGCG GTTTAACGGCGGTGT nrdE 2775281 - 2777386 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 2777396 - 2778355 + | ribonucleotide-diphosphate reductase subunit beta TERM 3475 2778470 - 2778494 + F 87 -7.2 -5.14477 | CTCTGTTGCATTATT CGCCTGAA ACTACAATA TTCAGGCG TTTTTTCGCTATCTA proV 2778710 - 2779912 + | glycine betaine transporter ATP-binding subunit proW 2779905 - 2780969 + | glycine betaine transporter membrane protein TERM 3476 2780979 - 2780997 + F 85 -12.4 -3.31144 | AAGTAACTCTGCACT TGCCCGGT GAC GCCGGGCA TTATCACCCTGCCAA TERM 3477 2781848 - 2781833 - g 71 -3.2 -4.87665 | opp_overlap 2781839, overlap 2781835 CTGGACCGAGAAAAA TCCGGC GGCA GCCAAA CTGTTTGCCATTATG proX 2781027 - 2782019 + | glycine betaine transporter periplasmic subunit TERM 3478 2782029 - 2782061 + F 84 -14.2 -2.87931 | gap 1, opp_overlap 2782039 AAGTAATTTTTATTC G-GGCGGATAAGGCG TTTT CGCCTCATCCGCCGC TCTGTACACAATGCC SF2708 2782211 - 2783170 + | hypothetical protein TERM 3479 2783856 - 2783842 - g 77 -7 -4.4874 | opp_overlap 2783843, overlap 2783843 TGCAAAAATCGAAAA CCGCCC TAT GGGCGT TTGGCCTGACGGATG TERM 3480 2783843 - 2783855 + G 81 -10.5 -3.60098 | opp_overlap 2783843 2783842 GCAAAAATCGAAAAC CGCCC TAT GGGCG TTTGGCCTGACGGAT TERM 3481 2783855 - 2783843 - g 76 -10.5 -3.28159 | opp_overlap 2783843, overlap 2783842 GCAAAAATCGAAAAC CGCCC TAT GGGCG TTTGGCCTGACGGAT SF2709 2783514 - 2784251 + | hypothetical protein TERM 3482 2784478 - 2784488 + G 70 -6.8 -4.03234 | GTCGGCTTCGCGGTA CTGG GTG CCAG TTTCTATAAAACACG ygaH 2784241 - 2784576 + | hypothetical protein TERM 3483 2784997 - 2784984 - g 70 -6.7 -4.11484 | TCGAACGTCGTAAAA GCGAT AACG ATCGC CGCTGCCTGCATCTG emrR 2784767 - 2785198 + | transcriptional repressor MprA TERM 3484 2785246 - 2785269 + F 100 -12.5 -4.56597 | opp_overlap 2785245 2785244 2785242 2785262 AAAGAAAAAATGACC GGCCAGCAT CGCAAC ATGCTGGCC TTTTTGGCAAGCAGG TERM 3485 2785736 - 2785725 - f 80 -5.8 -5.03314 | TTGAGGTGCAAAAAA TCGC CCTC GCGA AAGCACAAAGCGACT emrB 2786514 - 2788052 + | multidrug resistant protein emrB TERM 3486 2788082 - 2788063 - T 88 -12.2 -3.50422 | opp_overlap 2788063, overlap 2788059 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT TERM 3487 2788063 - 2788082 + T 100 -12.2 -5.1848 | opp_overlap 2788063 2788059 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT ygaG 2788631 - 2788116 - | S-ribosylhomocysteinase TERM 3488 2788750 - 2788767 + r 100 -11.3 -5.58522 | CAGAGATGAAATTTT GGCCACT CCCG AGTGGCC TTTTTCTTTTCTGTC gshA 2790121 - 2788781 - | glutamate--cysteine ligase SF2716 2790839 - 2790411 - | hypothetical protein yqaB 2791402 - 2790836 - | fructose-1-phosphatase csrA 2792646 - 2792461 - | carbon storage regulator alaS 2795511 - 2792881 - | alanyl-tRNA synthetase recX 2796139 - 2795639 - | recombination regulator RecX TERM 3489 2796187 - 2796170 - R 88 -8.3 -4.86862 | opp_overlap 2796169 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGCCCC AGGTTTTGCTGATAA recA 2797443 - 2796382 - | recombinase A TERM 3490 2797184 - 2797223 + g 100 -14.4 -4.08064 | gap 1, opp_overlap 2797168, overlap 2797185 GCACAGGTTTTACCT TCACGCTG-CGCTGCGG CGATCAC CTGCAGCGTCAGCGTGG TTTTACCGGAAGATT TERM 3491 2797185 - 2797222 + g 95 -15.7 -3.04517 | gap 1, opp_overlap 2797168, overlap 2797184 CACAGGTTTTACCTT CACGCTG-CGCTGCGG CGATCAC CTGCAGCGTCAGCGTG GTTTTACCGGAAGAT ygaD 2798020 - 2797523 - | competence damage-inducible protein A TERM 3492 2798165 - 2798121 - R 84 -5 -5.28778 | gap 1, opp_overlap 2798133 AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGTAAAT-AGC TACTGTACTCGCGCC mltB 2799250 - 2798165 - | murein hydrolase B TERM 3493 2799720 - 2799733 + H 81 -8.1 -4.45771 | overlap 2799728 GTTACCTACTGTTAC CGTGC ATTG GCACG TTTGTCTTTTGCAAT TERM 3494 2800431 - 2800412 - g 79 -3.6 -5.093 | overlap 2800415 CGTAAAAGAAGAAAA CATCAC TGTAGTGG GTGATG CGACACCACAACCCT srlE 2800065 - 2801024 + | PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components srlB 2801035 - 2801406 + | glucitol/sorbitol-specific PTS system component IIA srlD 2801410 - 2802189 + | sorbitol-6-phosphate dehydrogenase TERM 3495 2802221 - 2802194 - f 74 -10.7 -3.14564 | gap 1, overlap 2802214 TGATGTTCTGATCAA CAGCGGAGATCC GTTAA GGATCTCCG-TG AGACTATAGAATGCC TERM 3496 2802259 - 2802233 - f 100 -15.2 -3.57651 | CGTGAGACTATAGAA TGCCTGATGCGC TAC GCTCATCAGGCA TACAGGACTTCCGCC gutM 2802294 - 2802653 + | DNA-binding transcriptional activator GutM TERM 3497 2803414 - 2803390 - g 78 -10.8 -3.55444 | opp_overlap 2803412 TTTGCAGTCTTGAAA GCGTCGATAA GCTAA TTACCGACGC AGGTATCGATCCGGC srlR 2802720 - 2803493 + | DNA-bindng transcriptional repressor SrlR TERM 3498 2803684 - 2803697 + G 100 -3.7 -5.64274 | overlap 2803685 GCAACACTTGCCAGT ACCGG CACA CCGGC TTTTTTTGTCCATCC gutQ 2803486 - 2804451 + | D-arabinose 5-phosphate isomerase ygaA 2805962 - 2804448 - | anaerobic nitric oxide reductase transcription regulator TERM 3499 2806248 - 2806234 - g 84 -7.8 -4.68724 | overlap 2806235 GCACGGAATATAAAA CGCTGC GCG GCAGCA GCTACAACAGCTACC SF2733 2806149 - 2807588 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3500 2807760 - 2807781 + G 77 -12.3 -2.72043 | overlap 2807759 2807748 AACGTGCCGACGACC TTACCCGCC AGAC GGCGGGTGA ATTTGCCGGGCAGTT TERM 3501 2807893 - 2807917 + G 72 -7.8 -3.87373 | opp_overlap 2807894, overlap 2807894 GCAATACGACAAGTT AGTGCTGGCA ACCGG TGCCAGCGCC TTTGTCCCGCCTGTG TERM 3502 2807894 - 2807916 + G 75 -11.3 -2.92102 | opp_overlap 2807894, overlap 2807893 CAATACGACAAGTTA GTGCTGGCA ACCGG TGCCAGCGC CTTTGTCCCGCCTGT TERM 3503 2808331 - 2808306 - g 90 -13.3 -3.53224 | gap 1, opp_overlap 2808322 GACTGCGCCCGGAAA CAGCCCTGGCAC GAC GCGCC-GGGCTG ACGATTAATCGCGGC ygbD 2807585 - 2808718 + | nitric oxide reductase TERM 3504 2808772 - 2808739 - T 83 -9.5 -4.08216 | opp_overlap 2808746 2808747 2808749 2808759 2808760, overlap 2808740 CTACTGTGCCTAAAA TGTCGGATGCGACGC TGGC GCGTCTTATCCGACC TACGGGGACGCATGT TERM 3505 2808771 - 2808740 - T 82 -13 -3.04715 | opp_overlap 2808746 2808747 2808749 2808759 2808760, overlap 2808739 TACTGTGCCTAAAAT GTCGGATGCGACGC TGGC GCGTCTTATCCGAC CTACGGGGACGCATG hypF 2811098 - 2808846 - | transcriptional regulatory protein TERM 3506 2809445 - 2809431 - G 90 -11.4 -3.86346 | opp_overlap 2809439 2809440 CCACTCCGGCACAAA GCGCAG GCA CTGCGC CAGCAGGTTTCGCCA TERM 3507 2811077 - 2811087 + g 77 -3.2 -5.09426 | opp_overlap 2811064 TACGCAGTTGGACAC CGCA AGA TGTG TTTTTTGCCATTGAG TERM 3508 2811263 - 2811277 + r 93 -9.2 -4.85599 | opp_overlap 2811260 2811262 TTTTTAGAACATCAG CGCCGT ACG GCGGCG TTTTTCTGCGCTCAG hydN 2811778 - 2811251 - | electron transport protein HydN TERM 3509 2811914 - 2811885 - R 91 -7.9 -5.18357 | opp_overlap 2811887 2811908, overlap 2811887 TAATGCAGGAAAAAA GATGTCATCGACA CTAG TGACGATGACATG TGATGACAATGTTTA TERM 3510 2811887 - 2811912 + r 72 -10.5 -2.79679 | opp_overlap 2811885 2811887, overlap 2811908 ATGCAGGAAAAAAGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT TERM 3511 2811912 - 2811887 - R 90 -10.5 -4.2131 | opp_overlap 2811887 2811908, overlap 2811885 ATGCAGGAAAAAAGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT ascG 2812937 - 2811927 - | ascBF operon repressor hycE 2814789 - 2813080 - | large subunit of hydrogenase 3 (part of FHL complex) hycD 2815730 - 2814807 - | membrane-spanning protein of hydrogenase 3 (part of FHL complex) hycC 2817550 - 2815733 - | formate hydrogenlyase subunit 3 hycB 2818198 - 2817587 - | small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) TERM 3512 2818049 - 2818066 + g 71 -2.7 -4.86621 | gap 1, opp_overlap 2818051, overlap 2818051 2818052 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTGAGCAT TERM 3513 2818274 - 2818236 - R 79 -8.3 -4.2558 | gap 1 CATTTTTGACGAAAA CATGCCGATGAAATGTCA TTTT CGACACT-CATCGACACG CCCATCCCCAAACAG TERM 3514 2818301 - 2818287 - R 82 -11.4 -3.57263 | opp_overlap 2818299 ACGCCCATCCCCAAA CAGGCG TAA CGCCTG CAAAACGGGCAAAGC hycA 2818784 - 2818323 - | formate hydrogenlyase regulatory protein HycA hypA 2818984 - 2819346 + | hydrogenase nickel incorporation protein TERM 3515 2819626 - 2819613 - g 75 -4.5 -4.82901 | CGTGCTGGACAAAAA CAACC GTCT GGCTG AACGCAACCGCGCGC hypB 2819350 - 2820222 + | hydrogenase nickel incorporation protein HypB TERM 3516 2820335 - 2820371 + G 77 -10.2 -3.60296 | gap 1, overlap 2820341 CGATGAAAACGGTCA GCCGCGCGTGGGCCAGT GGGT ACTGGTTCACGT-TGGC TTTGCCATGAGCGTA TERM 3517 2820341 - 2820366 + G 80 -11.9 -3.28497 | overlap 2820335 AAACGGTCAGCCGCG CGTGGGCCAGT GGGT ACTGGTTCACG TTGGCTTTGCCATGA hypC 2820213 - 2820485 + | hydrogenase isoenzymes formation protein TERM 3518 2820834 - 2820824 - g 72 -6.8 -4.18018 | CTGTTGCAGGCAAAA GCAC GCG GTGC CGATGTGCGCATCGT TERM 3519 2821098 - 2821119 + G 72 -5.9 -4.36914 | GCCACGTTAGTATGG TTATCGGCA CTGA TGCCTATAA TTTTATCGCCAGCGA hypD 2820485 - 2821606 + | hydrogenase isoenzyme HypD hypE 2821645 - 2822613 + | hypE product TERM 3520 2822653 - 2822669 + F 100 -13.7 -3.72576 | AGTCAATGACCTTTT GCACCGC TTT GCGGTGC TTTCCTGGAAGAACA TERM 3521 2822768 - 2822784 + G 72 -10.1 -3.35775 | overlap 2822767 CAGCAGCCCGATCTG GCCTCGC TGT GTGAGGC TCTTTCGCAACTGGT TERM 3522 2822855 - 2822803 - g 77 -10 -3.60792 | gap 2, opp_overlap 2822814 2822816 2822851 TTCGCAACTGGTAAA GCGTTCTGCGCTCGCCGACAACGC GGCTATT GTGTTGT-GGCAAGCGCAGA-CTC AACGTGCGTCTTATT TERM 3523 2824281 - 2824269 - g 85 -3.3 -5.44119 | overlap 2824270 GCGATCTGAAAAAAA TGGTC GCC GACCG AGAGTTCCGTAGCGA fhlA 2822687 - 2824765 + | formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons TERM 3524 2824799 - 2824773 - T 72 -8.1 -3.6715 | gap 1, opp_overlap 2824774, overlap 2824766 2824774 TGATTTAACTGCAAA TTGCCGGACAGA TCTG CCTGTCCGG-AA TACTATTCACGAGGT ygbA 2825155 - 2824802 - | hypothetical protein insB 2825721 - 2825218 - | IS1 ORF2 SF2751 2825796 - 2826122 + | putative IS1 encoded protein TERM 3525 2826804 - 2826792 - g 72 -10.5 -3.05463 | ATGTCGCTGATTGAA GGCCG TCG CGGCC TGCGCCGTCGCCCGC TERM 3526 2827811 - 2827794 - g 70 -4.1 -4.62069 | opp_overlap 2827796 CTGGCACTGGAAAAA CAGCTTT ATGA AGAGCTG TTCGACCTGCTGTTG TERM 3527 2828700 - 2828683 - g 72 -6.3 -4.31433 | gap 1 CAGTGCCAGAAGAAA CTTCG-CC TGC GGTCGAAG CACTGGAAAATCTCG mutS 2826219 - 2828780 + | DNA mismatch repair protein TERM 3528 2828813 - 2828787 - T 87 -11 -3.9461 | opp_overlap 2828787 CTGGTGTAATAACAA TTCCCGATAG TCTTTTG CTATCGGGAA TATTAACGACAACTG TERM 3529 2828787 - 2828813 + T 78 -11.7 -3.01924 | opp_overlap 2828787 CTGGTGTAATAACAA TTCCCGATAGT CTTTT GCTATCGGGAA TATTAACGACAACTG TERM 3530 2828880 - 2828845 - T 100 -10.6 -5.38326 | CGAATCAAATAAAAA TACCCTGTATAATAGG AAAG CTTATTTTACAGGGTA AAACCATGCCATCTA ygbI 2830386 - 2829589 - | putative DEOR-type transcriptional regulator TERM 3531 2829869 - 2829851 - G 93 -8.9 -5.0065 | GATGCAGAAATAAAA GCCTGAT CAATC ATCAGGC TGCACAGCATGGTCG TERM 3532 2830434 - 2830470 + H 73 -11.2 -2.63301 | opp_overlap 2830445, overlap 2830445 GCAACTAACGCTTAG TTCACATAAAATAACA CAAAA TGTTAATTTATGTGAA TCATCTCACCATATC SF2756 2831742 - 2832044 + | IS600 ORF1 SF2757 2832080 - 2832898 + | IS600 ORF2 TERM 3533 2833103 - 2833122 + T 100 -10 -5.7946 | opp_overlap 2833103 2833105 GTTTCCTTTATTTAA CAGTCCGT TCCC GCGGACTG TTTTTTTATTCAGGC SF2758 2835228 - 2833132 - | putative phage transposase SF2759 2835481 - 2835230 - | putative DNA-binding protein TERM 3534 2835314 - 2835325 + g 100 -4.4 -5.69793 | opp_overlap 2835314, overlap 2835303 2835307 TATAGCGTCAGAAAT TACG CGTT CGTA TTTTTTGTTTGGTGT TERM 3535 2835541 - 2835502 - H 93 -10.8 -4.4715 | CTTTAACCTACAAAA TTACCCGCGCGGATATCC GGTC GGATATCCGTATGGATAA AGATTAAGATACCAA TERM 3536 2835551 - 2835583 + H 83 -6.4 -5.0809 | gap 1, opp_overlap 2835551 2835553, overlap 2835553 GGATAAAGATTAAGA TACCAAAGACTCCCT GCAA AGGGC-TCTTTGGTG TTTTTATGATTTATT TERM 3537 2835553 - 2835581 + H 71 -6.8 -4.13732 | gap 1, opp_overlap 2835553 2835551, overlap 2835551 ATAAAGATTAAGATA CCAAAGACTCCCT GCAA AGGGC-TCTTTGG TGTTTTTATGATTTA SF2760 2835646 - 2836209 + | putative regulatory protein yclC 2837429 - 2836479 - | putative 4-hydroxybenzoate decarboxylase padI 2838022 - 2837429 - | phenylacrylic acid decarboxylase-like protein TERM 3538 2838145 - 2838131 - H 85 -6.4 -5.14563 | overlap 2838132 TTCGTCACTAAAAAA CCGCTA TGA TAGCGA CAGAGAATTAGCCCG TERM 3539 2838407 - 2838429 + G 70 -6.9 -4.06678 | opp_overlap 2838405 2838408, overlap 2838408 TCAGACGTGAACATG ACGTCGCTG ACAAG CGGCGACGC TTTGTCTGGCTGACT SF2763 2838169 - 2838576 + | putative transcriptional regulator TERM 3540 2838654 - 2838677 + T 95 -12.4 -3.87075 | opp_overlap 2838654 CAAACAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT TERM 3541 2838677 - 2838654 - T 100 -14.6 -5.67711 | opp_overlap 2838654 CAAACAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT SF2764 2839724 - 2838696 - | RNA polymerase sigma factor RpoS nlpD 2840890 - 2839751 - | lipoprotein NlpD TERM 3542 2840012 - 2839993 - G 70 -7 -4.12254 | opp_overlap 2839992 TACCAGCATAAACAA CGCGGCCA TCTG CGGTCGCG ATAATTGCCTGTCCT TERM 3543 2840215 - 2840229 + g 72 -5 -4.65078 | TGGTCGCAGTTGGCT TGTTGT TCG GCAACA TTTTGTTAGCACTCT TERM 3544 2840486 - 2840509 + g 83 -5.3 -5.04385 | GTTGCCAGTAATCCA GGCGATATA GAAAAG TGTGTCGCC TTTTTTCACGGTATA TERM 3545 2840859 - 2840847 - G 86 -10.5 -3.96224 | GAAACCAGTGACAAA GCCGC AAT GCGGC GAACGGTGAATTTTG pcm 2841656 - 2841030 - | protein-L-isoaspartate O-methyltransferase TERM 3546 2841169 - 2841195 + g 70 -10.9 -2.72511 | overlap 2841168 AGAATCCCGCCTTCG TCCAGCTGCGT CATTA GCGCAGTTGGA ATTTCCGGCGGTGCC surE 2842411 - 2841650 - | stationary phase survival protein SurE truD 2843441 - 2842392 - | tRNA pseudouridine synthase D ispF 2843917 - 2843438 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2844627 - 2843917 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3547 2844592 - 2844580 - G 73 -9.1 -3.57462 | CATTCGACGGCCAAA TCCGG CCG CCGGA ACCACGGCGCAAACA ftsB 2844957 - 2844646 - | cell division protein FtsB TERM 3548 2845040 - 2845062 + r 74 -11.4 -2.82142 | opp_overlap 2845038, overlap 2845039 ATACCGCGACAACGC GGGCAAATGT ACC ACATTTGTCC ATTGTTACGTATACC ygbE 2845474 - 2845151 - | hypothetical protein cysC 2846129 - 2845524 - | adenylylsulfate kinase TERM 3549 2846075 - 2846034 - G 71 -9.5 -3.55071 | gap 1, opp_overlap 2846035 2846045, overlap 2846039 2846042 GGAGAGGCCGGTAAA CCACA-GCACTACACCACGA TGA CCGTGGTGTAGTTCGCGTTG TTGCACAGTGACCGG TERM 3550 2846035 - 2846072 + g 73 -9.2 -3.62597 | gap 1, opp_overlap 2846034 2846039 2846042, overlap 2846045 GAGAGGCCGGTAAAC CACAGCACTACACCACG ATGAC CGTGGTGTAGTTC-GCG TTGTTGCACAGTGAC TERM 3551 2846069 - 2846039 - G 93 -14.8 -3.00525 | opp_overlap 2846035 2846045, overlap 2846034 2846042 GGCCGGTAAACCACA GCACTACACCACGA TGA CCGTGGTGTAGTTC GCGTTGTTGCACAGT TERM 3552 2846066 - 2846042 - G 90 -15.1 -2.7314 | opp_overlap 2846035 2846045, overlap 2846039 2846034 CGGTAAACCACAGCA CTACACCACGA TGA CCGTGGTGTAG TTCGCGTTGTTGCAC cysN 2847556 - 2846129 - | sulfate adenylyltransferase subunit 1 TERM 3553 2846692 - 2846676 - G 72 -5.8 -4.32034 | opp_overlap 2846676 CGATCACCATCAAAA GTCACG ATCCG CGCGAC GTTTGATTCCACACC cysD 2848466 - 2847558 - | sulfate adenylyltransferase subunit 2 TERM 3554 2848618 - 2848606 - H 76 -4.8 -4.88228 | opp_overlap 2848615 AGCTAATATCAAAAA GTGC TTAAG GCAC CGGATTTCGGGCGTT iap 2848718 - 2849755 + | alkaline phosphatase isozyme conversion aminopeptidase SF2777 2850851 - 2849841 - | hypothetical protein TERM 3555 2850299 - 2850288 - G 71 -2.2 -5.0133 | GACGCGTGGAAAAAA TCGC GTTG ACGA CCCTGTCCAGTCTGC TERM 3556 2851395 - 2851425 + r 86 -9.1 -4.45083 | gap 1, opp_overlap 2851360 2851416 TACGTTCGAACGCGA GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 3557 2851581 - 2851556 - R 100 -9.7 -5.45802 | opp_overlap 2851556 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 2852336 - 2851602 - | phosphoadenosine phosphosulfate reductase cysI 2854122 - 2852410 - | sulfite reductase subunit beta TERM 3558 2852794 - 2852765 - G 95 -11.5 -4.37092 | gap 1, overlap 2852777 2852778 ATGTTGTCGATAAAA GACGGCAGGAAACG CTC CGCTTCC-GCCATC GCCAGCGGGCAAGTC cysJ 2855921 - 2854122 - | sulfite reductase subunit alpha TERM 3559 2855830 - 2855816 - G 70 -7.1 -4.0056 | overlap 2855808 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TAGGCGTTAAATCGG TERM 3560 2856148 - 2856168 + H 72 -6.2 -4.21194 | ATTAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA TERM 3561 2856580 - 2856568 - g 91 -9.1 -4.67048 | opp_overlap 2856567 2856572, overlap 2856570 TGATGGTAAAAGAAA CCTGC ACC GCAGG GTGTATCTATCGCGG ygcM 2856240 - 2856602 + | putative 6-pyruvoyl tetrahydrobiopterin synthase TERM 3562 2856728 - 2856759 + GF 91 -11.5 -4.08689 | overlap 2856729 2856756 GCCGGTATTGCAGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGA TTTATCCGTTTTGTT TERM 3563 2856729 - 2856758 + GF 93 -15 -3.03587 | overlap 2856728 2856756 CCGGTATTGCAGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG ATTTATCCGTTTTGT TERM 3564 2856756 - 2856767 + GF 77 -5.8 -4.71426 | overlap 2856729 2856728 TACGCTGCGCGCGAG CGGA TTTA TCCG TTTTGTTACTCGAAC ygcN 2856650 - 2857951 + | hypothetical protein ygcO 2857906 - 2858202 + | hypothetical protein TERM 3565 2858689 - 2858664 - T 74 -3.9 -5.08824 | opp_overlap 2858646, overlap 2858665 GGGTGACGGAAAAAA TCCGCCAAC CGCTGATT GCTGGCGGG CTGGTATGCGATGAA ygcQ 2859835 - 2858942 - | putative flavoprotein ygcR 2860578 - 2859799 - | putative transport protein ygcS 2861965 - 2860556 - | putative transport protein TERM 3566 2861945 - 2861924 - G 100 -14.5 -3.9461 | GTCCGGTAATAAGAA CGGCTTCTC GCCT GAGAAGCCG AAAAGGCAACGCCCC TERM 3567 2861979 - 2861950 - G 93 -11.4 -4.21936 | CTGAGAAGCCGAAAA GGCAACGCCCCG TCATCG CGGAACGCTGCC TGATACATTATTTTT SF2788 2862781 - 2861987 - | hypothetical protein TERM 3568 2862556 - 2862572 + g 70 -10.1 -3.17392 | TCCCTTCGCCCGTCG CCTTCGC AAT GCGAGGG TTACCTTCAGCCATA insB 2863090 - 2863593 + | IS1 ORF2 ygcF 2864303 - 2863632 - | hypothetical protein TERM 3569 2864155 - 2864144 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 3570 2864247 - 2864234 - G 84 -3.7 -5.24551 | overlap 2864235 GTAAACGAATAAAAA TGGCG GGAA CGCCG GTAAAGTAACCCTCA insA 2864697 - 2864972 + | IS1 ORF1 insB 2864999 - 2865394 + | IS1 ORF2 ygcG 2865396 - 2866205 + | hypothetical protein TERM 3571 2866240 - 2866221 - T 100 -13.6 -5.31275 | opp_overlap 2866221 2866221 2866222 CTCCACCATAAAAAA TGCCAGCC CGAA GGCTGGCA TTATCAAATCAGATA TERM 3572 2866221 - 2866240 + T 90 -13.6 -3.33162 | opp_overlap 2866221, overlap 2866221 2866222 CTCCACCATAAAAAA TGCCAGCC CGAA GGCTGGCA TTATCAAATCAGATA eno 2867563 - 2866265 - | phosphopyruvate hydratase TERM 3573 2867606 - 2867634 + r 76 -11.7 -2.7458 | opp_overlap 2867608 2867611, overlap 2867605 CTGAAACTCCAGACA AACAACGCGTACC CAA GGTACGCGTTGCC GTTCTAACTTTTTTA TERM 3574 2867632 - 2867608 - R 100 -18.7 -4.07562 | opp_overlap 2867606 2867605, overlap 2867611 GAAACTCCAGACAAA CAACGCGTACC CAA GGTACGCGTTG CCGTTCTAACTTTTT TERM 3575 2867629 - 2867611 - R 100 -14.6 -4.15029 | opp_overlap 2867606 2867605, overlap 2867608 ACTCCAGACAAACAA CGCGTACC CAA GGTACGCG TTGCCGTTCTAACTT pyrG 2869288 - 2867651 - | CTP synthetase TERM 3576 2868958 - 2868979 + g 90 -11.5 -3.90744 | opp_overlap 2868947 TAACCTGCACGGTTG CGCCGAGGT AGTC ACCGCGGCG TTCTTTACGCAGAAC mazG 2870307 - 2869516 - | nucleoside triphosphate pyrophosphohydrolase TERM 3577 2869845 - 2869857 + g 74 -7.7 -4.11869 | opp_overlap 2869845 TCCAGTCGAAGCCAA CGTTG GCG CAACG TTTCTGGATTTTTTG TERM 3578 2870399 - 2870360 - R 79 -8.6 -4.2558 | opp_overlap 2870366, overlap 2870362 2870364 TACCTTCGAGTAAAA GATATCGCTGGATACGGC TGAC GCCATATCCAGCTATGTA AGACTAACTCCCGTG TERM 3579 2870397 - 2870362 - R 86 -11.2 -3.73042 | opp_overlap 2870366, overlap 2870360 2870364 CCTTCGAGTAAAAGA TATCGCTGGATACGGC TGAC GCCATATCCAGCTATG TAAGACTAACTCCCG TERM 3580 2870395 - 2870364 - R 90 -13.8 -3.44672 | opp_overlap 2870366, overlap 2870362 2870360 TTCGAGTAAAAGATA TCGCTGGATACGGC TGAC GCCATATCCAGCTA TGTAAGACTAACTCC TERM 3581 2870366 - 2870393 + r 84 -14.2 -2.88663 | opp_overlap 2870364 2870362 2870360 CGAGTAAAAGATATC GCTGGATACGGC TGAC GCCATATCCAGC TATGTAAGACTAACT relA 2872637 - 2870403 - | GDP/GTP pyrophosphokinase rumA 2873986 - 2872685 - | 23S rRNA 5-methyluridine methyltransferase TERM 3582 2874915 - 2874894 - g 70 -4.3 -4.57569 | opp_overlap 2874895, overlap 2874895 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 3583 2876020 - 2876007 - g 71 -2.3 -5.02323 | overlap 2876002 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGTA barA 2874043 - 2876799 + | hybrid sensory histidine kinase BarA TERM 3584 2876990 - 2877021 + T 95 -10.9 -4.67943 | opp_overlap 2876996, overlap 2876996 GCGTTTAGCATCAGT CTCAAACCGGCTC CAGATA GAGCCGGTTTTGG TTTTCTGTCTTAACG TERM 3585 2877015 - 2876996 - T 82 -11.4 -3.58522 | opp_overlap 2876990 2876996 AGCATCAGTCTCAAA CCGGCTCC AGAT AGAGCCGG TTTTGGTTTTCTGTC TERM 3586 2876996 - 2877015 + T 100 -10.7 -4.75518 | opp_overlap 2876996, overlap 2876990 AGCATCAGTCTCAAA CCGGCTC CAGATA GAGCCGG TTTTGGTTTTCTGTC ygcX 2878371 - 2877031 - | putative glucarate dehydratase TERM 3587 2877850 - 2877874 + g 70 -10.7 -2.83403 | opp_overlap 2877853, overlap 2877849 ATGACGCAGGCGATA CCAGTCGCATG AGT CATCCGGCTGG CTTTGATACGGCAGA ygcY 2879732 - 2878392 - | putative glucarate dehydratase TERM 3588 2879018 - 2879000 - G 70 -4.5 -4.55295 | CTTTGCATAAAGAAA TGGCTTC ATCAA GCAGCCA TGCACCGTTGGGATC TERM 3589 2879670 - 2879693 + g 79 -10.4 -3.85092 | gap 1, opp_overlap 2879664 ATTGAGCAACATGCT GTCATGTCCGG CGA CCGGA-ATGAC TTTCATATCAGTAAT SF2802 2881101 - 2879734 - | putative transport protein TERM 3590 2881272 - 2881254 - R 76 -4.4 -4.93898 | overlap 2881217 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA SF2803 2881984 - 2881535 - | flavodoxin yqcB 2882784 - 2882002 - | tRNA pseudouridine synthase C SF2805 2883113 - 2882784 - | hypothetical protein TERM 3591 2883164 - 2883193 + r 79 -10.7 -3.51411 | opp_overlap 2883166, overlap 2883160 2883165 TAGCAGGAATAAAAA AAGGGAGCACTGT ATTC ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3592 2883165 - 2883192 + r 83 -14.2 -2.70525 | opp_overlap 2883166, overlap 2883164 2883160 AGCAGGAATAAAAAA AGGGAGCACTGT ATTC ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3593 2883191 - 2883166 - R 100 -17.7 -5.84381 | opp_overlap 2883165 2883164 2883160 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGTGCTCCC GGTTCGTTTCGCAGC syd 2884280 - 2883735 - | SecY interacting protein Syd TERM 3594 2884183 - 2884160 - G 74 -8.9 -3.9392 | opp_overlap 2884159 2884160 CGGTAGTTGAAATAA TGCACGGTG AAGGAA CACCGTACA ATTCCTCACTTAACG TERM 3595 2885050 - 2885028 - g 71 -10.6 -2.86271 | opp_overlap 2885026 2885040 2885041, overlap 2885025 2885040 CCGTCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 2884348 - 2885196 + | 7-cyano-7-deazaguanine reductase TERM 3596 2886341 - 2886324 - g 81 -6.3 -4.86731 | gap 1 GCTGGTGAAAGAAAA TCGCC-GT GAT ACAGGCGA TGCCTACAGCTTTAA ygdH 2885308 - 2886672 + | hypothetical protein TERM 3597 2886741 - 2886766 + F 100 -9.8 -5.61596 | opp_overlap 2886741 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3598 2886766 - 2886741 - f 72 -9.1 -3.61398 | opp_overlap 2886741 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SF2809 2886756 - 2888102 + | IS4 orf TERM 3599 2888113 - 2888084 - f 89 -9.3 -4.59109 | opp_overlap 2888085, overlap 2888086 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCCCCCGGTGAC TERM 3600 2888085 - 2888112 + F 81 -12.8 -3.14564 | opp_overlap 2888084 2888086 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCCCCGGTGA TERM 3601 2888111 - 2888086 - f 100 -16.3 -3.90762 | opp_overlap 2888085, overlap 2888084 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCCCCGGTG TERM 3602 2888120 - 2888141 + F 93 -10.1 -4.72556 | overlap 2888138 GACTGGCATTACTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG TERM 3603 2888138 - 2888149 + F 71 -3.6 -4.77157 | overlap 2888120 GGTGACGTTTGTTGC CGGG TTTT CTCG TTTTTGGTCACTTAC TERM 3604 2888395 - 2888420 + F 76 -8.5 -4.06527 | gap 1, overlap 2888401 AGAAGTCAGATGTCG TTTAATGGGCAA ATA TTGCCC-TTAAA TTCTCTTTTACTTTT TERM 3605 2888401 - 2888415 + F 73 -10 -3.32941 | overlap 2888395 CAGATGTCGTTTAAT GGGCAA ATA TTGCCC TTAAATTCTCTTTTA sdaC 2888666 - 2889955 + | serine transporter TERM 3606 2889964 - 2889983 + F 81 -12.8 -3.27786 | overlap 2889976 2889978 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 3607 2890790 - 2890770 - g 72 -5.3 -4.4767 | opp_overlap 2890770 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA TERM 3608 2891356 - 2891320 - g 71 -9.4 -3.42659 | gap 1, opp_overlap 2891355, overlap 2891314 AGGTAAAGACATGAA CGCCAAG-TACCGCGAA ACCT CTCGCGGCGGCCTGGCG ATGAAGATCGTTGCC sdaB 2890013 - 2891380 + | L-serine dehydratase (deaminase), L-SD2 TERM 3609 2891390 - 2891412 + F 75 -9.8 -3.57825 | overlap 2891405 GATTAATCTCTCCCA GAGGCCTCGT TTT GCGAAGCCTC TTCCTGTTTTCTCAA TERM 3610 2891660 - 2891649 - g 75 -7.2 -4.30576 | overlap 2891651 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG xni 2891401 - 2892246 + | exonuclease IX TERM 3611 2892252 - 2892281 + T 70 -9.3 -3.32844 | overlap 2892253 GGTACGGTAACGGCG AGCCGGATACG CCGCAAAT CGTATCCGGCA TTATCACATCAGCGC TERM 3612 2892253 - 2892280 + T 78 -12.8 -2.59564 | overlap 2892252 GTACGGTAACGGCGA GCCGGATACG CCGCAAAT CGTATCCGGC ATTATCACATCAGCG fucO 2893447 - 2892299 - | L-1,2-propanediol oxidoreductase TERM 3613 2892654 - 2892638 - G 70 -5.7 -4.38712 | TGGAGTGTTATAAAA CGCGCCC AGT GGATGCG CCATACCATGCACCA fucA 2894122 - 2893475 - | L-fuculose phosphate aldolase TERM 3614 2894858 - 2894875 + G 77 -6.3 -4.62957 | gap 1 ACAAATTTCCAGGCT GGCCTGAT CCA ATC-GGCC TTTTACTTTGGTTAT fucP 2894669 - 2895985 + | L-fucose transporter TERM 3615 2896039 - 2896028 - g 93 -2.2 -5.63103 | CTGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC TERM 3616 2896744 - 2896728 - g 71 -3 -4.82901 | gap 1, overlap 2896730 CTGGGCTGATAAAAA CTTCCGC TATG GCG-AAG ATGAAAATAACAAAC fucI 2896018 - 2897793 + | L-fucose isomerase TERM 3617 2897858 - 2897885 + F 82 -12.9 -3.01791 | overlap 2897860 ACAAGCAAGAGTGGT TAGCCGGATAA ACAATG TTATCCGGCTA TATTGCAGGAGCGAT TERM 3618 2897860 - 2897883 + F 75 -11.1 -3.06696 | overlap 2897858 AAGCAAGAGTGGTTA GCCGGATAA ACAATG TTATCCGGC TATATTGCAGGAGCG fucU 2899323 - 2899745 + | protein of fucose operon TERM 3619 2899741 - 2899731 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATACCGG TERM 3620 2899758 - 2899778 + F 73 -9.6 -3.34043 | overlap 2899759 TAATCTCATACCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 3621 2899759 - 2899777 + F 81 -13.1 -2.60212 | overlap 2899758 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 3622 2900051 - 2900069 + G 72 -11.6 -2.52464 | opp_overlap 2900050 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 2899803 - 2900534 + | DNA-binding transcriptional activator FucR ygdE 2901678 - 2900578 - | putative RNA 2'-O-ribose methyltransferase ygdD 2902066 - 2901671 - | hypothetical protein TERM 3623 2902039 - 2902025 - G 74 -8.5 -3.88001 | TGCCACAAAAATGAA GCCGC TAATG GCGGC GAAAATCAGCATAAA gcvA 2903002 - 2902085 - | DNA-binding transcriptional activator GcvA TERM 3624 2903244 - 2903258 + r 100 -10 -5.17576 | opp_overlap 2903243 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 3625 2903309 - 2903328 + r 100 -10.7 -5.86332 | opp_overlap 2903309 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC TERM 3626 2903328 - 2903309 - R 70 -10.7 -2.57423 | opp_overlap 2903309 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC SF2823 2903583 - 2903353 - | hypothetical protein SF2824 2903772 - 2904977 + | cysteine sulfinate desulfinase ygdK 2904977 - 2905420 + | hypothetical protein TERM 3627 2905429 - 2905466 + T 100 -14.9 -3.92542 | opp_overlap 2905429 2905430, overlap 2905430 2905432 GGTTTAAGCACAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC TERM 3628 2905466 - 2905429 - T 100 -17.1 -3.59946 | opp_overlap 2905429 2905430 2905432, overlap 2905430 GGTTTAAGCACAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC TERM 3629 2905430 - 2905465 + T 100 -18.4 -2.95204 | opp_overlap 2905429 2905430, overlap 2905429 2905432 GTTTAAGCACAGAAC CGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTG ATTGTTTAACCCTGA TERM 3630 2905465 - 2905430 - T 100 -18.4 -2.75647 | opp_overlap 2905430 2905429 2905432, overlap 2905429 GTTTAAGCACAGAAC CGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTG ATTGTTTAACCCTGA TERM 3631 2905432 - 2905463 + T 100 -17.4 -3.02639 | opp_overlap 2905430 2905429, overlap 2905430 2905429 TTAAGCACAGAACCG GGTCGGATAAGACG TTCG CGTCTCATCCGACC TGATTGTTTAACCCT ygdL 2906277 - 2905471 - | putative enzyme TERM 3632 2906317 - 2906297 - R 100 -10.4 -4.93365 | CCTCAGAATTAAAAA GGGCGAGG TTATC CCTCACCC TAAACGCATAAATGC mltA 2907612 - 2906515 - | murein transglycosylase A TERM 3633 2908017 - 2908030 + r 100 -8.1 -6.02919 | opp_overlap 2908017 CAACCAATTATTGAA CACCC TAAC GGGTG TTTTTTTGTTTCTGA TERM 3634 2908074 - 2908061 - R 88 -5.9 -5.60993 | opp_overlap 2908061 TCTCCCATAAAAAAA GCGCC ATTC AGCGC CTTTTTATCATCCCC SF2828 2909425 - 2908082 - | putative amidase TERM 3635 2908394 - 2908404 + g 78 -8.2 -4.25104 | opp_overlap 2908394 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTCACGCCAC TERM 3636 2910343 - 2910360 + G 79 -12.7 -2.98381 | opp_overlap 2910335, overlap 2910341 2910345 AGTGAAAGCCTGCCG CAGCGGC GTGC GCCGCTG TCATTTAATCAGTTA TERM 3637 2910859 - 2910844 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 2909567 - 2910898 + | N-acetylglutamate synthase TERM 3638 2910953 - 2910909 - T 74 -7.2 -4.30978 | gap 2, opp_overlap 2910909, overlap 2910912 GGTAAGCGATGAAAA TCACCGGATGCG--GCAGGCGT AAC ACTCGTGCGTCGCATCCGGCAA TTACGTTTATTCCCG RecD 2912786 - 2910960 - | exonuclease V subunit alpha TERM 3639 2911698 - 2911714 + g 79 -4.3 -5.00616 | opp_overlap 2911696 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 3640 2912490 - 2912468 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCGCC ACA GAGGATCATC GGCGTGGGTTCATCT RecB 2916328 - 2912786 - | exonuclease V subunit beta TERM 3641 2913947 - 2913972 + g 74 -8.3 -3.85817 | gap 1, overlap 2913948 CAGATCTTCCGCCAG ACGTTCGACCTC CGC GAGGTCG-ACGC TTTCTGGCGCAGCAT TERM 3642 2913948 - 2913971 + g 75 -11.8 -2.91276 | gap 1, overlap 2913947 AGATCTTCCGCCAGA CGTTCGACCTC CGC GAGGTCG-ACG CTTTCTGGCGCAGCA TERM 3643 2915287 - 2915299 + g 74 -6.2 -4.57569 | overlap 2915286 2915294 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 3644 2915475 - 2915454 - G 70 -5.8 -4.16016 | CGATCTTCTAAGAAA CGCTGGGA GAATTT TTCCAGCG ACTCCGGCAACTGAT TERM 3645 2916196 - 2916182 - G 71 -9.2 -3.53224 | CAGCGGGCGGGGAAA GGCGGC GGA ACCGCC TAGTCCAAGTAACAG TERM 3646 2916297 - 2916271 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptr 2919209 - 2916321 - | protease III TERM 3647 2916945 - 2916962 + g 72 -5.5 -4.58395 | CGCTGCCAGTGCGGA GTCGGTG CTGT TACCGGC TTTTTCAAAGATGAC TERM 3648 2918395 - 2918423 + g 84 -3.7 -5.28755 | overlap 2918390 2918396 2918403 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT TERM 3649 2918841 - 2918827 - G 70 -7.1 -4.128 | ACTTCCAGATAGAAA GCCGT GCGAT ACGGC GCAGTGCTGGCATTG recC 2922753 - 2919385 - | exonuclease V subunit gamma TERM 3650 2919774 - 2919762 - G 95 -9.1 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCGCC ATTACCACCGCTGGC TERM 3651 2921798 - 2921780 - G 70 -4.4 -4.45083 | opp_overlap 2921783 GTCACATCGACAAAA GCGTCCAG CTC CTGGCTGC TCTCCAGGTCAGAAA ppdC 2923116 - 2922766 - | hypothetical protein ygdB 2923508 - 2923101 - | hypothetical protein TERM 3652 2923300 - 2923330 + g 85 -8.2 -4.56597 | opp_overlap 2923304 GCGTACTGCGAGCAC TGAACTGCTGGCTG CGT CTGCCAGGAGTGCA TTTTTCCCCACGCCA TERM 3653 2924701 - 2924682 - R 100 -10.7 -5.44119 | CGGAGGGTAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT thyA 2925517 - 2924723 - | thymidylate synthase TERM 3654 2925138 - 2925155 + g 72 -4.7 -4.64598 | GCTGAAACAATAATG CGGCGCG AATC CGGGTCG TTTTTCAGCTGGTTC TERM 3655 2925390 - 2925360 - G 72 -11.1 -3.09516 | opp_overlap 2925376 TCGTGGATGATGGAA CGCAGGTGGCAAC GTTTG GTTGTCACCAGCG GGAATCCATCCTGCA lgt 2926399 - 2925524 - | prolipoprotein diacylglyceryl transferase ptsP 2928796 - 2926550 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 3656 2928102 - 2928142 + g 81 -10.6 -3.61398 | gap 2, opp_overlap 2928078 2928110 TCTTTTTGTGCTCCG GCGGCAAA-GCGTTT-GCTG TAG CGGCGAAACTCGTTTGCCGC TTCTTCCAGCGCCCC ygdP 2929339 - 2928809 - | dinucleoside polyphosphate hydrolase TERM 3657 2930277 - 2930262 - g 76 -7.6 -4.27316 | opp_overlap 2930260 2930262 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCGCT TERM 3658 2930641 - 2930653 + G 85 -6.9 -4.86731 | CGAACGGATTCTGAC GCTGC CAC GCGGC TTTTATTTGAAGAAG mutH 2930024 - 2930713 + | DNA mismatch repair protein SF2842 2930782 - 2931495 + | putative transport protein SF2843 2931633 - 2931851 + | hypothetical protein TERM 3659 2931880 - 2931856 - f 79 -8.6 -4.20918 | opp_overlap 2931855 2931854, overlap 2931859 TTGAACGTTAACAAA TAAGGTCAGC ATCCG GCTGGCCTTA AGATTTTTCTCTTTC TERM 3660 2932785 - 2932775 - g 93 -8.2 -4.82855 | opp_overlap 2932774 2932772, overlap 2932777 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATCGC SF2844 2931959 - 2932999 + | putative aldo-keto reductase TERM 3661 2933030 - 2933001 - T 77 -9.3 -3.96327 | opp_overlap 2933002 2933007, overlap 2933003 2933019 ATCCTGCACCATAAA GATTAACGCCGGT TAAA ACCGGCGTTAAAT ATTAATGACGGCGCT TERM 3662 2933002 - 2933029 + T 81 -12.8 -3.13403 | opp_overlap 2933001 2933003 2933019, overlap 2933007 TCCTGCACCATAAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC TERM 3663 2933028 - 2933003 - T 100 -16.3 -3.57406 | opp_overlap 2933002 2933007, overlap 2933001 2933019 CCTGCACCATAAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 3664 2933007 - 2933024 + T 81 -12.7 -3.20348 | opp_overlap 2933003 2933001 2933019, overlap 2933002 CACCATAAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 3665 2933066 - 2933036 - T 70 -9 -3.45571 | opp_overlap 2933039, overlap 2933019 2933030 2933039 GGCGTTAAATATTAA TGACGGCGCTGC CAGATCC ACAGCGCCGTTA TTGCCAGCGCAAATA TERM 3666 2933039 - 2933063 + T 75 -10 -3.61398 | opp_overlap 2933019 2933036 2933030 2933039 GTTAAATATTAATGA CGGCGCTG CCAGATCCA CAGCGCCG TTATTGCCAGCGCAA TERM 3667 2933063 - 2933039 - T 72 -10.7 -2.8742 | opp_overlap 2933039, overlap 2933019 2933036 2933030 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG TTATTGCCAGCGCAA ygeD 2934222 - 2933032 - | hypothetical protein TERM 3668 2933562 - 2933549 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 2936374 - 2934215 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 3669 2936470 - 2936487 + H 81 -12.7 -3.14132 | opp_overlap 2936470 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3670 2936487 - 2936470 - H 100 -12.7 -5.75945 | opp_overlap 2936470 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3671 2936690 - 2936673 - H 100 -12.7 -6.07627 | opp_overlap 2936672 2936669 2936679 ACCGGCAAAAAAAAA CCTGCGC ATCT GCGCAGG CTGGTGTAATTCATG galR 2936960 - 2937991 + | DNA-binding transcriptional regulator GalR lysA 2939260 - 2937998 - | diaminopimelate decarboxylase lysR 2939382 - 2940317 + | DNA-binding transcriptional regulator LysR ygeA 2940996 - 2940304 - | putative racemase TERM 3672 2941118 - 2941092 - R 100 -18.8 -5.30155 | CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGACGCC araE 2942543 - 2941125 - | low-affinity L-arabinose transport system proton symport protein TERM 3673 2942600 - 2942582 - R 76 -4.6 -5.04385 | overlap 2942584 2942585 GACATTGTGAAAAAA TACGTGAA CAA TTCACACA GGTGTCAGGTCGGAA TERM 3674 2942835 - 2942818 - R 100 -12.7 -5.4492 | TAGAGATATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAG kduD 2943619 - 2942858 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 3675 2943462 - 2943447 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTCGATGG kduI 2944485 - 2943649 - | 5-keto-4-deoxyuronate isomerase TERM 3676 2944531 - 2944545 + r 72 -5 -4.60797 | overlap 2944528 2944532 AATAGAAAACGATAG TGAAAC ACT GTTTCG TTTTCTCTATAAAGG TERM 3677 2944591 - 2944619 + r 86 -12.1 -3.60792 | opp_overlap 2944598, overlap 2944598 GGCTAGGGTTTTCAA TTAAAAATAAAAC AAT GTTTTATTTTTAA TTTAAGGATTAAAAA TERM 3678 2944612 - 2944598 - R 78 -5.8 -4.8622 | opp_overlap 2944591 2944598 GTTTTCAATTAAAAA TAAAAC AAT GTTTTA TTTTTAATTTAAGGA TERM 3679 2944598 - 2944612 + r 80 -5.8 -4.98531 | opp_overlap 2944598, overlap 2944591 GTTTTCAATTAAAAA TAAAAC AAT GTTTTA TTTTTAATTTAAGGA yqeF 2945953 - 2944772 - | acetyl-CoA acetyltransferase TERM 3680 2946040 - 2946027 - H 84 -5.3 -5.41746 | AATTGTTTAAAAAAA GTGAT TTTT ATCAC AAAGGAAATATGCCT SF2855 2946319 - 2947437 + | putative transporter protein TERM 3681 2947447 - 2947484 + F 100 -16.7 -4.8083 | gap 1, overlap 2947440 2947448 AGCTAATATCCGTTG TGG-ATGGTTCAAAATTG CTA CAATTTTGAACCATTCCA TTTTTCATAATATTC TERM 3682 2947448 - 2947482 + F 100 -18.2 -2.67364 | overlap 2947440 2947447 GCTAATATCCGTTGT GGATGGTTCAAAATTG CTA CAATTTTGAACCATTC CATTTTTCATAATAT SF2856 2948063 - 2948371 + | IS3 ORF1 TERM 3683 2948645 - 2948618 - g 75 -4.7 -4.74103 | overlap 2948619 2948620 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC SF2857 2948368 - 2949234 + | IS3 ORF2 SF2858 2949841 - 2949248 - | hypothetical protein TERM 3684 2950210 - 2950245 + r 79 -8.2 -4.20932 | overlap 2950240 CGGTCTGACTACCCG GCCCTTTTGGTCTGGC TCAG GTCAGGCTATGGGGGC TTTTGGCTCGCTCTT TERM 3685 2950458 - 2950430 - R 100 -11.7 -4.80453 | CTAGTACAAAATAAA GGCCAGACATCCA GTT CGGAAGTCTGACC AATAGTCGTTATTGT SF2859 2951462 - 2950473 - | hypothetical protein SF2860 2952037 - 2951546 - | hypothetical protein SF2861 2953081 - 2952335 - | hypothetical protein SF2862 2953443 - 2953781 + | IS911 ORF1 TERM 3686 2953887 - 2953867 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT SF2863 2953808 - 2954071 + | IS911 ORF2 SF2864 2954247 - 2954651 + | IS911 ORF2 SF2865 2955788 - 2955456 - | hypothetical protein SF2866 2957517 - 2955907 - | putative integrase SF2867 2958583 - 2957804 - | putative lipoprotein TERM 3687 2957911 - 2957925 + g 76 -4.2 -5.00884 | opp_overlap 2957887 2957883 ATGCCGCATCCGTGC TCCCCA TAG TGGCGA TTTTTTGCCCAGCCT TERM 3688 2959272 - 2959252 - g 78 -8.3 -4.25658 | overlap 2959249 ACTTGACGAAAACAA GCGCGAT ACCGCCG ATCGCGC ACTGCTAACTCGCCA TERM 3689 2960575 - 2960608 + G 77 -10.3 -3.61398 | gap 1, overlap 2960577 2960578 CTCACGCCAGAGCTA TGTTGCCGCGCCTGCG CTG CGCAG-TGCGGCACTA TTATTAAAAGAGAAA TERM 3690 2960577 - 2960606 + G 76 -10.7 -3.38812 | gap 1, overlap 2960575 2960578 CACGCCAGAGCTATG TTGCCGCGCCTGCG CTG CGCAG-TGCGGCAC TATTATTAAAAGAGA TERM 3691 2960578 - 2960605 + G 84 -14.2 -2.63073 | gap 1, overlap 2960577 2960575 ACGCCAGAGCTATGT TGCCGCGCCTGCG CTG CGCAG-TGCGGCA CTATTATTAAAAGAG TERM 3692 2960666 - 2960625 - g 80 -5.2 -4.91977 | gap 1 TATTAAAAGAGAAAA TCATCGCTCAC-GCCGCAG TCATG CTACATCAGTCAGCGATGA ATTTGACCCTGATAA SF2868 2958974 - 2961271 + | xanthine dehydrogenase subunit XdhA TERM 3693 2961357 - 2961335 - g 70 -9.8 -3.16564 | TGCCGATGCCATCAA CCTGCTGGCT GAC AACCCGCAGG CCAAACTGCTCGCCG ygeT 2961282 - 2962160 + | xanthine dehydrogenase subunit XdhB SF2870 2962157 - 2962636 + | xanthine dehydrogenase subunit XdhC TERM 3694 2962670 - 2962639 - f 93 -10.8 -4.5528 | opp_overlap 2962644, overlap 2962640 2962644 GAAAACGAAGTAAAA GGATATCCGGCCTG AATT CAGGCCGGATTCAC TGAGGTTATGTGTTT TERM 3695 2962668 - 2962640 - f 90 -14 -3.31541 | gap 1, opp_overlap 2962644, overlap 2962639 2962644 AAAACGAAGTAAAAG GATATCCGGCCTG AATT CAGGCCGGAT-TC ACTGAGGTTATGTGT TERM 3696 2962665 - 2962644 - f 100 -15.9 -3.14708 | opp_overlap 2962644, overlap 2962640 2962639 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG TERM 3697 2962644 - 2962665 + F 93 -15.9 -3.08471 | opp_overlap 2962640 2962639 2962644 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG insA 2962749 - 2963024 + | IS1 ORF1 SF2872 2964164 - 2963259 - | insertion element IS2 transposase InsD SF2873 2964487 - 2964122 - | insertion sequence 2 OrfA protein ygfU 2965214 - 2966731 + | putative permease SF2875 2966981 - 2967529 + | isopentenyl-diphosphate delta-isomerase TERM 3698 2967551 - 2967534 - T 100 -10.5 -5.64421 | opp_overlap 2967534 AGCTTAAATAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAACGT lysS 2969089 - 2967572 - | lysyl-tRNA synthetase TERM 3699 2970240 - 2970266 + r 100 -11.7 -5.24129 | gap 1, opp_overlap 2970240 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG TERM 3700 2970266 - 2970240 - R 82 -11.7 -3.30903 | gap 1, opp_overlap 2970240 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG recJ 2972021 - 2970288 - | ssDNA exonuclease RecJ TERM 3701 2971180 - 2971190 + g 71 -3.2 -4.87665 | GCAAAACCTAAATCG CTGG CGG CTAG TTTTTGTGCATCGCG TERM 3702 2971422 - 2971410 - G 70 -4.7 -4.58395 | CTGATCGCGCAAAAA GGTGC GCA GCGCC AGCATCAGATAAAAC dsbC 2972737 - 2972027 - | thiol:disulfide interchange protein DsbC TERM 3703 2972230 - 2972240 + g 84 -4 -5.19879 | CTGCCATCACATCAT CAAA CGC TTTG TTTTTATCTTTCGCA xerD 2973658 - 2972762 - | site-specific tyrosine recombinase XerD fldB 2973770 - 2974291 + | flavodoxin FldB TERM 3704 2974298 - 2974327 + T 72 -8.5 -3.77188 | TACGCCTGATCTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TCTTTATCTTTGCGT SF2882 2974738 - 2974331 - | hypothetical protein ygfY 2974985 - 2974719 - | hypothetical protein ygfZ 2975228 - 2976208 + | putative global regulator SF2885 2977063 - 2976404 - | putative oxidoreductase TERM 3705 2976468 - 2976485 + g 71 -9.1 -3.50572 | opp_overlap 2976453 2976468 2976467 CCGCCGAGCACGAAG CCGTGCC AGAT GGCATGG TTGTATGGAATGCGT TERM 3706 2978136 - 2978124 - g 70 -5.5 -4.38369 | opp_overlap 2978134 CAACGAAATAAACAA CCAGC GTA ACTGG CGTGCGCCGCTGTTT bglA 2977582 - 2979015 + | 6-phospho-beta-glucosidase A TERM 3707 2979055 - 2979025 - T 74 -10.6 -3.18681 | gap 1, opp_overlap 2979019, overlap 2979028 CTTTAAGTCGATGAA GTACCGGATGCAA TACTTG TTGCATCCGGT-C AGACAACTTCCCTGT TERM 3708 2979053 - 2979028 - T 82 -13.4 -2.79023 | opp_overlap 2979019, overlap 2979025 TAAGTCGATGAAGTA CCGGATGCAA TACTTG TTGCATCCGG TCAGACAACTTCCCT ygfF 2979815 - 2979072 - | hypothetical protein TERM 3709 2980043 - 2980056 + r 75 -9.5 -3.56092 | opp_overlap 2980043 TCATCTGACTAAAAA GGCGC CGAA GCGCC TTTAGAAAATACTCG TERM 3710 2980056 - 2980043 - R 100 -9.5 -4.7373 | opp_overlap 2980043 TCATCTGACTAAAAA GGCGC CGAA GCGCC TTTAGAAAATACTCG gcvP 2982955 - 2980082 - | glycine dehydrogenase gcvH 2983463 - 2983074 - | glycine cleavage system protein H gcvT 2984581 - 2983487 - | glycine cleavage system aminomethyltransferase T TERM 3711 2984985 - 2984962 - R 93 -10.3 -4.39386 | overlap 2984956 TTCAAATGAGGAAAA TCTCCCGGC GAAAAA ACCGGGAGA TGAAAGTGTGATGGG visC 2986231 - 2985029 - | hypothetical protein TERM 3712 2985631 - 2985643 + g 73 -9.1 -3.67775 | opp_overlap 2985619 AAACCTGCCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 2987432 - 2986254 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 2988754 - 2987429 - | proline aminopeptidase P II TERM 3713 2988687 - 2988673 - G 75 -5.6 -4.72272 | opp_overlap 2988673 2988677, overlap 2988674 2988676 2988677 CTGGTGCAGCAAAAA TCAGCG CGG CGCTGC CGGGTTGCATTTGCT TERM 3714 2988686 - 2988674 - G 71 -9.1 -3.43042 | opp_overlap 2988673 2988677, overlap 2988673 2988676 2988677 TGGTGCAGCAAAAAT CAGCG CGG CGCTG CCGGGTTGCATTTGC ygfB 2989358 - 2988780 - | hypothetical protein ygfE 2989526 - 2989855 + | Z-ring-associated protein TERM 3715 2990526 - 2990549 + G 74 -3 -4.91109 | overlap 2990527 2990530 CTTTGATGAGTACGG TCAGCGCCTG GGAA TGGGCGGTGG TTTTTATGATCGGAC ygfA 2990155 - 2990703 + | putative ligase TERM 3716 2990880 - 2990899 + T 86 -11.4 -3.66178 | ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 3717 2991125 - 2991085 - T 78 -6.2 -4.7254 | gap 2, opp_overlap 2991078 2991086 2991095, overlap 2991086 2991087 AGTGGCTATCAAAAA GTTCGGTTCAGGGCGATGCA CCC CGCATCGCCCTGATT-G-AC ATCGTTGATTCTTTG TERM 3718 2991095 - 2991117 + T 86 -14.9 -2.74488 | opp_overlap 2991087 2991085 2991086, overlap 2991086 2991078 AAAAAGTTCGGTTCA GGGCGATGC ACCCC GCATCGCCC TGATTGACATCGTTG TERM 3719 2991272 - 2991291 + T 86 -11.4 -3.66178 | overlap 2991285 ACCCTTCTCCTTTAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 3720 2991436 - 2991466 + T 76 -8.2 -4.07568 | opp_overlap 2991440, overlap 2991440 TGGAGAAGGGATAAA AAAACGGGCAAGTC AGT GACCTGCCCGTTAA TTTTCAGAGAAGGGG TERM 3721 2991462 - 2991440 - T 100 -15.6 -5.66684 | opp_overlap 2991440 2991436 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA TERM 3722 2991440 - 2991462 + T 95 -13.4 -3.66908 | opp_overlap 2991440, overlap 2991436 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA serA 2992716 - 2991484 - | D-3-phosphoglycerate dehydrogenase TERM 3723 2992148 - 2992161 + g 72 -4.5 -4.70515 | overlap 2992147 2992149 TGTACCTGAGTGGCG TTGCC CAGC GGCAG TTTGTTTTCAATATC TERM 3724 2992801 - 2992783 - R 79 -3.2 -5.27399 | overlap 2992786 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCGA TERM 3725 2992798 - 2992786 - R 72 -4.9 -4.69962 | overlap 2992783 CATATCAAAAAATAA TATTG CGG CAATA TGAACGTTTGCGTCG TERM 3726 2992945 - 2992971 + r 77 -11.6 -2.91873 | opp_overlap 2992938 2992936, overlap 2992942 AATGAAGAGAATTTT TTTAACGGGGGA GGT TCCCCCGTCAGA TCATTTCACAATGGT rpiA 2993631 - 2992972 - | ribose-5-phosphate isomerase A TERM 3727 2993058 - 2993080 + g 72 -7 -4.20531 | AGCCAACAGTCACCA CGCCAGGAAT CGC ATTTATGGCG TTTTCCATCGCTATC TERM 3728 2994232 - 2994209 - g 72 -4.4 -4.70626 | overlap 2994211 GAACAAGGGCAAAAA CTGCTGGCAC TGCT GCGCCAGGTG GAGTTGCTGGAAGAA iciA 2994014 - 2994907 + | chromosome replication initiation inhibitor protein TERM 3729 2994941 - 2994921 - f 70 -9.8 -3.0082 | opp_overlap 2994921 2994920, overlap 2994920 AATCCATCAAATAAT GCCTGATA GCACA TATCAGGC GTTGTCCTCACTTCT TERM 3730 2995584 - 2995605 + G 74 -5.9 -4.57353 | gap 1, overlap 2995583 GATGACCATGAATGG CG-CAGTGCT ACC AGTACTGGCG TTTTATATCGTCGCC TERM 3731 2995981 - 2995991 + G 70 -6.8 -4.06419 | AACGTCGCCATGTTG CGTG CGG CACG TTATTTATGGAGCGA sbm 2995111 - 2997255 + | methylmalonyl-CoA mutase TERM 3732 2997586 - 2997598 + G 72 -6.9 -4.1552 | opp_overlap 2997577, overlap 2997587 GAATGACCTGGCGCG TGCCG AGG CGGCG TTTATTCGCCCGGTA ygfD 2997248 - 2998243 + | arginine/ornithine transport system ATPase ygfG 2998254 - 2999039 + | methylmalonyl-CoA decarboxylase ygfI 3001433 - 3000483 - | putative LYSR-type transcriptional regulator TERM 3733 3000542 - 3000600 + g 83 -9.89999 -4.06904 | gap 2, overlap 3000542 TCGATGCTGGGTTAA TGGT--TTGTCCCGTCACGATCTTCAGCA ATA TGCTGAAGATCGTGGCGGTATAACGATGA TTTCTGATTGAATAA TERM 3734 3000542 - 3000597 + g 100 -18.6 -3.0682 | gap 1, overlap 3000542 TCGATGCTGGGTTAA TGGTTTGTCCCGTCACGATCTTCAGCA ATA TGCTGAAGATCGTGGCGGTATAA-CGA TGATTTCTGATTGAA TERM 3735 3001326 - 3001351 + g 84 -3.9 -5.24129 | opp_overlap 3001332, overlap 3001327 CGCGGCAATGCTTTT ACCAAATGGCG AAGC CGTCATATGGA TTTTTTCTGCCGCCC TERM 3736 3001567 - 3001597 + r 79 -10.5 -3.50808 | gap 1, opp_overlap 3001556 3001566 3001565 3001569, overlap 3001565 AATATCGGGTAAAGG CAT-TAGCCCGACG AATA CGTCGGGCTACAAG TATTATTGTGCTGCA TERM 3737 3001594 - 3001569 - R 81 -13.3 -2.64472 | opp_overlap 3001567 3001565, overlap 3001556 3001566 3001565 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAGTATTATTGTGCT yggE 3002340 - 3001600 - | hypothetical protein yggA 3003068 - 3002433 - | arginine exporter protein TERM 3738 3003198 - 3003173 - R 82 -11.9 -3.31932 | opp_overlap 3003171, overlap 3003171 ATAACTAATAAGAGA GAGGCCAGAGA GTAT TATCTGGCCTC AGCGTTGATTACGCA yggB 3004067 - 3003207 - | mechanosensitive channel MscS TERM 3739 3004233 - 3004217 - R 100 -11.5 -5.40072 | TTTTGGCGAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fba 3005337 - 3004258 - | fructose-bisphosphate aldolase TERM 3740 3005517 - 3005497 - R 75 -3.1 -5.20216 | overlap 3005498 TAGAGTATGAAAAAA TGCGTGCTC TAA AAGCGCGCT GAAACAAGTGCAGGT pgk 3006715 - 3005552 - | phosphoglycerate kinase epd 3007784 - 3006765 - | erythrose 4-phosphate dehydrogenase TERM 3741 3008209 - 3008228 + H 72 -2.8 -5.02074 | gap 1, overlap 3008211 CTTTTACGCACTGCG CCTCCT-CC CCG GGCAGGAAG TTTTTTCCCAGCTAC SF2913 3008318 - 3008587 + | putative DNA-binding protein SF2914 3008610 - 3009188 + | putative inner membrane protein TERM 3742 3009546 - 3009561 + F 71 -10.4 -2.67406 | overlap 3009550 GCTCTGTTTGCTTCT CGCCTG CCGC CAGGCG TCGCTTATCTGTTTG SF2916 3009884 - 3010561 + | putative ATP-binding protein of ABC transport system TERM 3743 3010783 - 3010770 - g 78 -5.2 -4.7657 | opp_overlap 3010781, overlap 3010772 GAAAAACCTGAAAAA CCGC CAGCGC GCGG CAAAGGTTGGCGTAC TERM 3744 3011136 - 3011159 + G 81 -9.6 -4.11805 | opp_overlap 3011132 GGTAGCAATCAGTCA TGACGCCG CATTTACC CGGCGTCA TTTCTCTCGTGTGGT SF2917 3010555 - 3011232 + | putative ATP-binding protein of ABC transport system frcK 3011917 - 3011204 - | putative fructose transport system kinase yggD 3012423 - 3011914 - | putative DNA-binding transcriptional regulator yggF 3013221 - 3012445 - | fructose-1,6-bisphosphatase II-like protein TERM 3745 3013281 - 3013319 + r 76 -2.5 -5.35224 | overlap 3013289 3013300 GAAAAGCGACGTCGT TTAATG-CCTGGCGCATCG CGG TGAC-CGCCAGGCCATCAA TTTTATTTTTGTCGC TERM 3746 3013352 - 3013371 + r 85 -13.6 -3.05384 | overlap 3013354 CATCCGGTTTGCGGC CAGGCAGC CAAC GCTGCCTG TTCCGTAACGCGAAA TERM 3747 3013354 - 3013369 + r 73 -10.4 -3.08679 | overlap 3013352 TCCGGTTTGCGGCCA GGCAGC CAAC GCTGCC TGTTCCGTAACGCGA SF2921 3014396 - 3013407 - | putative oxidoreductase insB 3015045 - 3014650 - | IS1 ORF2 insA 3015347 - 3015072 - | IS1 ORF1 TERM 3748 3015645 - 3015660 + H 72 -4.8 -4.58859 | TTGTTATGTTCATCA CAAAAT CAAC ATTTTG TTTGTTATTGTATTT TERM 3749 3016057 - 3016037 - g 77 -9.7 -3.64703 | TCCCTTTTATGGAAA GCGTGGAGA AAA TTTCCACGC GTAATCAGGCTGTGG SF2924 3015838 - 3016746 + | putative serine protease TERM 3750 3016752 - 3016769 + T 74 -10.5 -3.28924 | opp_overlap 3016752 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGTCC TTCTCACAAAACGTC TERM 3751 3016769 - 3016752 - T 100 -8.3 -5.65513 | opp_overlap 3016752 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGTCC TTCTCACAAAACGTC tktA 3018783 - 3016792 - | transketolase TERM 3752 3019754 - 3019727 - g 77 -10 -3.65314 | GCGAAGCTGGAAGAA GGTCGTCAAA GCTCAATG TTTGACGACC ATCCTGCATCCGCCG yggG 3018935 - 3019819 + | hypothetical protein TERM 3753 3019985 - 3019954 - T 70 -10.8 -2.52464 | opp_overlap 3019954, overlap 3019964 CGGGTGCCGAACGTA GGTCGGATAAGGCG TTCA CGCCGCATCCGACA TTAATGGCACGTTTT speB 3020945 - 3020025 - | agmatinase TERM 3754 3020578 - 3020568 - G 72 -6.8 -4.1822 | CGGCAGCGTAACAAA GTGG TCA CCAC CGAAGGAGAGCATAC TERM 3755 3020905 - 3020893 - G 77 -3.4 -5.03314 | opp_overlap 3020899 3020902, overlap 3020900 GGCAGGCGTAAAAAA CCAA AGGCA TTGG AAACCAGTGAGTTAT TERM 3756 3020981 - 3021013 + r 90 -14.9 -3.27525 | opp_overlap 3020981, overlap 3020976 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC TERM 3757 3021013 - 3020981 - R 100 -14.9 -5.71712 | opp_overlap 3020981 3020976 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC SF2928 3021455 - 3021081 - | lipoprotein insB 3021876 - 3021481 - | IS1 ORF2 insA 3022178 - 3021903 - | IS1 ORF1 speA 3024213 - 3022207 - | arginine decarboxylase TERM 3758 3022530 - 3022520 - G 81 -6.8 -4.59342 | overlap 3022522 CCGACCATAAAGAAA CCGA GCA TCGG CGGATTCTCTGGATC yqgB 3024356 - 3024210 - | hypothetical protein TERM 3759 3024418 - 3024401 - H 81 -8.5 -4.52703 | opp_overlap 3024391 3024413, overlap 3024391 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC TERM 3760 3024657 - 3024681 + H 76 -2.2 -5.27335 | gap 1, overlap 3024661 ACCCGGCTGGAAGTG GCAACACGA AAGAAACG TCGTGT-GC TTTTTATTTAAGCCG TERM 3761 3024695 - 3024705 + H 79 -8.2 -4.36914 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA TERM 3762 3025472 - 3025460 - g 91 -9.1 -4.59853 | TGAAGTGCGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 3763 3026071 - 3026059 - g 72 -5.5 -4.57482 | opp_overlap 3026059 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGTGA TERM 3764 3026136 - 3026107 - g 74 -2.7 -5.00616 | gap 1, overlap 3026115 TCCCGTGGGAAAAAA CCGACAAAGCGCAG CTG CTGCGCGATG-CTG CCGGTCTGAAGTAAT TERM 3765 3026129 - 3026115 - g 91 -11.4 -4.11869 | overlap 3026107 GAAAAAACCGACAAA GCGCAG CTG CTGCGC GATGCTGCCGGTCTG metK 3024996 - 3026150 + | S-adenosylmethionine synthetase TERM 3766 3026173 - 3026191 + F 100 -11.7 -5.48213 | opp_overlap 3026173 TCACCTGCGTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 3767 3026191 - 3026173 - f 86 -11.7 -3.53444 | opp_overlap 3026173 TCACCTGCGTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 3768 3026506 - 3026525 + F 78 -6.5 -4.68994 | overlap 3026486 GTAAGCGATTACACT GATGTGA TTTGCT TCACATC TTTTTACGTCGTACT galP 3026626 - 3027981 + | major facilitator superfamily galactose-proton symporter TERM 3769 3028241 - 3028266 + G 75 -5.5 -4.63486 | ATCCGCCTCAATCCC GTTTTGCTGTT GGAA AACAGTGAAGC TTTTATTGAAGAAGT sprT 3028058 - 3028555 + | hypothetical protein TERM 3770 3028888 - 3028874 - g 71 -2.7 -4.77757 | overlap 3028875 GCGCAAAAATGAAAA CCGCG CCAGC CGCGT AGAGTGGGAACACGT TERM 3771 3029146 - 3029130 - g 87 -4.3 -5.28942 | opp_overlap 3029145, overlap 3029142 GATTTCAAAGAAAAA GCTGCCG AAC CACCAGC GCGTGCACGCGGTGC endA 3028650 - 3029357 + | DNA-specific endonuclease I TERM 3772 3029405 - 3029427 + F 72 -4.7 -4.71061 | opp_overlap 3029406, overlap 3029406 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT yggJ 3029437 - 3030168 + | hypothetical protein TERM 3773 3031070 - 3031090 + G 74 -11.2 -3.1552 | opp_overlap 3031068, overlap 3031068 AGATTGAAGCAGAGT TTCCGGTG TCGAT CACCGGAA TGTTAATGGATGCCA gshB 3030181 - 3031131 + | glutathione synthetase TERM 3774 3031168 - 3031208 + F 70 -2.3 -5.00616 | TCGTTGAGACTCTGA GTGACAGCGCCCTTCTTTC CAC GCATACTGGGCGCTGTTGC TTTTTTGAACCAGGA yqgE 3031240 - 3031803 + | hypothetical protein TERM 3775 3032109 - 3032121 + G 70 -4.7 -4.56597 | overlap 3032104 CTTAGCACTGTGGAA GCCCG TTC CGGTC TTTTTGAACAGGGCG TERM 3776 3032174 - 3032157 - g 76 -7.7 -4.15044 | opp_overlap 3032170 CGGGCGCTCAACAAA GGCAAAG TTGA CTCTGCC TCTGCGGTTATTATT yqgF 3031803 - 3032219 + | Holliday junction resolvase-like protein TERM 3777 3032312 - 3032345 + TF 79 -8.1 -4.30933 | opp_overlap 3032322, overlap 3032313 CTGGCAGCGGCTGTA GGTCTGATAAGACGC GTTA GCGTCGCATCAGACA TTTATTGCCTTTATA TERM 3778 3032313 - 3032344 + TF 79 -11.6 -3.17475 | opp_overlap 3032322, overlap 3032312 TGGCAGCGGCTGTAG GTCTGATAAGACGC GTTA GCGTCGCATCAGAC ATTTATTGCCTTTAT yggR 3033420 - 3032395 - | putative transport protein TERM 3779 3033442 - 3033463 + GH 83 -12.3 -3.28791 | GGGACAAAATCTCAG CGGCTGCAA CGCG TTGCGGCCG TTCTCCAGAAGAAAT TERM 3780 3033526 - 3033507 - gH 83 -5.7 -5.13722 | overlap 3033508 GTCAGTAAAACAAAA CCTGCGA GCGCCA TCGCAGA AGCCATTGATGCCGG TERM 3781 3033673 - 3033661 - gH 72 -4.7 -4.65916 | overlap 3033628 3033662 TGCAGTCTAATAAAA GCCGC CTA GTGGC AGAGCATTTCGACTG TERM 3782 3034033 - 3034020 - gH 71 -9.5 -3.14468 | TCGGACGATATGGAA GCCGC CATT GCGGC AGGTAGCACGATGGT yggS 3033393 - 3034097 + | hypothetical protein yggT 3034115 - 3034681 + | putative resistance protein TERM 3783 3034903 - 3034888 - g 70 -3.9 -4.65895 | GTGGTGATTGAAAAA GGCGA ACTTGG CCGCC ACAAACAAATTAAAA yggU 3034678 - 3034968 + | hypothetical protein TERM 3784 3035029 - 3035044 + G 78 -9 -3.96093 | AGTGCGTGAGCTGGC GTCGCT GCTT AGCGAC TTTGGTCTTGATATC TERM 3785 3035212 - 3035235 + G 77 -10.2 -3.65046 | overlap 3035204 AGATGCGCTGGGTGG CGCGCCGGGT ATTT ACTCCGCGCG TTATTCCGGTGAAGA yggV 3034976 - 3035569 + | putative deoxyribonucleotide triphosphate pyrophosphatase yggW 3035562 - 3036698 + | coproporphyrinogen III oxidase TERM 3786 3036695 - 3036732 + F 81 -8.5 -4.37658 | opp_overlap 3036684 3036699 3036702 3036706, overlap 3036684 3036698 3036699 3036702 3036706 ATTATTCCTCGCTGA GTAATCATTAATGCGCC TGCG GGCGCATTAATCACTTC TTTTATCCCCCCGTT TERM 3787 3036698 - 3036729 + F 83 -8.8 -4.30995 | opp_overlap 3036699 3036702 3036706, overlap 3036695 3036699 3036702 3036706 ATTCCTCGCTGAGTA ATCATTAATGCGCC TGCG GGCGCATTAATCAC TTCTTTTATCCCCCC TERM 3788 3036728 - 3036699 - f 81 -12.3 -3.14132 | opp_overlap 3036699 3036698 3036695 3036702 3036706, overlap 3036702 3036706 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTATCCCCC TERM 3789 3036699 - 3036728 + F 81 -12.3 -3.18115 | opp_overlap 3036699 3036702 3036706, overlap 3036698 3036695 3036702 3036706 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTATCCCCC TERM 3790 3036702 - 3036725 + F 84 -14 -2.78052 | opp_overlap 3036699 3036702 3036706, overlap 3036699 3036698 3036695 3036706 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTATCC TERM 3791 3036725 - 3036702 - f 84 -14 -2.77899 | opp_overlap 3036702 3036699 3036698 3036695 3036706, overlap 3036699 3036706 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTATCC TERM 3792 3036706 - 3036721 + F 74 -10.4 -3.26842 | opp_overlap 3036702 3036699 3036706, overlap 3036702 3036699 3036698 3036695 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT TERM 3793 3036721 - 3036706 - f 74 -10.4 -3.29096 | opp_overlap 3036706 3036702 3036699 3036698 3036695, overlap 3036702 3036699 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT SF2947 3037012 - 3037365 + | hypothetical protein SF2948 3037382 - 3037975 + | hypothetical protein TERM 3794 3038002 - 3037978 - f 73 -9.9 -3.38812 | opp_overlap 3037979 3037982, overlap 3037976 3037979 CGCTGCTCAATAATA TTCCGGGCCAG CCT CTGGCCCTGAT TTTCCAGGATGCTTA TERM 3795 3038001 - 3037979 - f 81 -13.4 -2.63073 | opp_overlap 3037979 3037982, overlap 3037978 3037976 GCTGCTCAATAATAT TCCGGGCCAG CCT CTGGCCCTGA TTTTCCAGGATGCTT TERM 3796 3037979 - 3038001 + F 95 -13.4 -4.10429 | opp_overlap 3037978 3037976 3037979, overlap 3037982 GCTGCTCAATAATAT TCCGGGCCAG CCT CTGGCCCTGA TTTTCCAGGATGCTT TERM 3797 3037982 - 3037998 + F 85 -13.7 -3.08508 | opp_overlap 3037979 3037978 3037976, overlap 3037979 GCTCAATAATATTCC GGGCCAG CCT CTGGCCC TGATTTTCCAGGATG SF2949 3038020 - 3038523 + | hypothetical protein insB 3038941 - 3038546 - | IS1 ORF2 insA 3039243 - 3038968 - | IS1 ORF1 TERM 3798 3039652 - 3039666 + G 77 -11.4 -3.14564 | CTGGTTCAGCCGTTG CGGCAG CTG CTGCCG TTGGTGGCACACTGA TERM 3799 3039939 - 3039925 - g 74 -8.6 -3.85817 | ACCCGCTTTCAGAAA GAGCAA CCT TTGCTC AGGCCTGTAAAGCGT SF2952 3039300 - 3040601 + | hypothetical protein TERM 3800 3040645 - 3040606 - T 75 -3 -5.15969 | gap 1, overlap 3040609 GGCTAATGTAAAAAA TA-ATTTGCCGGATAACTT TTT ATATTATCCGGCAAAGGCA CTTAACATGAGTTAC TERM 3801 3040641 - 3040609 - T 100 -12.9 -4.67173 | overlap 3040606 TAATGTAAAAAATAA TTTGCCGGATAACTT TTT ATATTATCCGGCAAA GGCACTTAACATGAG yggM 3041664 - 3040702 - | putative alpha helix chain TERM 3802 3041542 - 3041554 + g 71 -3.3 -4.76892 | opp_overlap 3041542 ATCAAGCTTGAGAAT GCCGT GAT ACTGC TTTTTGAATTGATCT TERM 3803 3041773 - 3041753 - R 100 -14.7 -4.74103 | opp_overlap 3041754 GTCTGAAGTGAAAAA GCCCCGGCA CGA TGCCGGGAC GAGGTGATTAGTACT ansB 3042827 - 3041781 - | L-asparaginase II TERM 3804 3042526 - 3042544 + g 85 -3.1 -5.41143 | ACGAAGCCGTCGGTT TTATCGC AGTCG GCGTTAA TTTTTTTCGCCAGTG TERM 3805 3042987 - 3042965 - R 79 -9.2 -4.12315 | opp_overlap 3042965 AAACGAAGAATTAAA CGGCATAAAA AAG TATTATGCCG TCTTAAAATAGAGGA yggN 3043719 - 3043003 - | hypothetical protein TERM 3806 3043080 - 3043099 + g 77 -6.4 -4.63184 | opp_overlap 3043079 CATCTTTGCCAAACT GCTGGAAA TCTT TTTCCTGC TTTTTCCACTCGGTT TERM 3807 3043651 - 3043629 - G 73 -12 -2.82623 | overlap 3043626 3043631 GCGGGCTGACAATCA CATCGTCACG CGG CGTGACGCTG CACTGGTAGTCGGCG TERM 3808 3043693 - 3043709 + g 74 -8 -4.12188 | opp_overlap 3043693 3043692 TGCCGTCACTGAAAG TGCTGC CGCCA GCAGCA TTTTGCGCATCATAG TERM 3809 3043766 - 3043743 - R 86 -8.8 -4.44667 | overlap 3043746 TCCCTCAAGAACAAA TCAGGCCAGC ATAT GCTGGCCCCA GATTGATAACAAAGT TERM 3810 3043763 - 3043746 - R 81 -12.7 -3.19055 | overlap 3043743 CTCAAGAACAAATCA GGCCAGC ATAT GCTGGCC CCAGATTGATAACAA yggL 3044232 - 3043906 - | hypothetical protein trmB 3044951 - 3044232 - | tRNA (guanine-N(7))-methyltransferase TERM 3811 3045955 - 3045940 - g 72 -10.4 -3.28924 | CATTGGCTGGCACAA CGGCAG ATTG CTGCCG ATAACCTGACGCAAC mutY 3045112 - 3046164 + | adenine DNA glycosylase TERM 3812 3046374 - 3046354 - g 73 -4 -4.78981 | overlap 3046368 ATTAATGAAAAGAAA CTCAACAT GATGA ATGCCGAG CACCGCAAGCTGCTG yggX 3046192 - 3046467 + | hypothetical protein TERM 3813 3046498 - 3046471 - f 93 -6.3 -5.8096 | gap 1, opp_overlap 3046473, overlap 3046473 3046474 GATAAAAAATAAAAA CAG-TGCCGGAG CACGC CTCCGGCAGCTT GCATAAAAACAAACA TERM 3814 3046495 - 3046473 - f 86 -9.1 -4.48934 | opp_overlap 3046473, overlap 3046471 3046474 TAAAAAATAAAAACA GTGCCGGAG CACGC CTCCGGCAG CTTGCATAAAAACAA TERM 3815 3046494 - 3046474 - f 81 -12.6 -3.257 | opp_overlap 3046473, overlap 3046473 3046471 AAAAAATAAAAACAG TGCCGGAG CACGC CTCCGGCA GCTTGCATAAAAACA mltC 3046529 - 3047611 + | murein transglycosylase C TERM 3816 3047645 - 3047622 - f 70 -10.3 -2.51471 | overlap 3047621 GATAATTCCATTAAC CGCCCCTGA CGATGC TCAGGGGCA AAAATGTTATCCACA nupG 3047765 - 3049069 + | permease protein for nucleosides TERM 3817 3049074 - 3049117 + T 90 -14 -3.34013 | opp_overlap 3049085, overlap 3049085 TTAGCCACTAATTAC GCAAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTATTC TTACTTCAACACATA TERM 3818 3049106 - 3049085 - T 100 -11.5 -5.30616 | opp_overlap 3049074 3049085 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC TERM 3819 3049085 - 3049106 + T 100 -13.7 -5.95946 | opp_overlap 3049085, overlap 3049074 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC speC 3051313 - 3049118 - | ornithine decarboxylase TERM 3820 3049427 - 3049438 + g 76 -3.6 -4.92363 | CGGGAAACTCTGCTG GCGG AACA TCGC TTTTTGTAGGTCTTT TERM 3821 3050158 - 3050145 - G 72 -5.2 -4.57569 | overlap 3050114 TTATGCGGGCAAAAA CGCG CCTGTC CGCG GATATGGTTATCTTT TERM 3822 3050159 - 3050170 + g 82 -3 -5.29782 | ACGCGCCTGTCCGCG GATA TGGT TATC TTTTTTATGGATCTG TERM 3823 3050846 - 3050861 + g 77 -6.8 -4.56597 | opp_overlap 3050846 GAAATCGTAAAAATG GCGTCC GGCA GGATGC TTTTTAAAGAACGCA TERM 3824 3051095 - 3051074 - G 90 -7.3 -5.0916 | overlap 3051091 TTCGGAATACAAAAA CACCGGT AGATGAAA ACCGGTG CGCTTAAGCAACGCA TERM 3825 3051357 - 3051387 + H 73 -9.9 -3.41602 | opp_overlap 3051356 3051359 3051366 CCGACCGCCAGACAT CAGTAAAAGCAGA AACGC TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 3826 3051462 - 3051447 - H 71 -7.6 -3.92005 | ACATAGAAAGGGAAA CGTTTC GCGC GAAACG GCGATAAGCGAGAGA yqgA 3051651 - 3052358 + | putative transport protein TERM 3827 3052506 - 3052490 - f 73 -10.9 -2.62616 | opp_overlap 3052489 3052488 3052485 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 3828 3052571 - 3052552 - f 90 -13.6 -3.31196 | opp_overlap 3052552 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 3829 3052552 - 3052571 + F 100 -13.6 -4.98531 | opp_overlap 3052552 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 3830 3052951 - 3052938 - g 70 -5.2 -4.386 | GAAGCTCGTACAAAA CGGG ATGAGG CCCG AAAACTGATTTCAGA SF2964 3052737 - 3053999 + | putative P4-type integrase TERM 3831 3053993 - 3054041 + F 100 -9.1 -5.38958 | gap 2, opp_overlap 3053997 3053999 3054003, overlap 3053996 3054003 GATTAACAATCCATT AAAATAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTAATTA TTTTTCTTTGTAAAT TERM 3832 3053996 - 3054038 + F 100 -10.8 -4.76311 | gap 2, opp_overlap 3053997 3053999 3054003, overlap 3053993 3054003 TAACAATCCATTAAA ATAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTAA TTATTTTTCTTTGTA TERM 3833 3054037 - 3053997 - f 100 -14.3 -4.32651 | gap 2, opp_overlap 3053996 3053993 3054003, overlap 3053999 3054003 AACAATCCATTAAAA TAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTA ATTATTTTTCTTTGT TERM 3834 3054033 - 3053999 - f 100 -14.3 -3.75571 | opp_overlap 3053996 3053993 3054003, overlap 3053997 3054003 CAATCCATTAAAATA GTAAGCAGTCCGGGC AATCA GCCCGGACTGCTTTA ACTAATTATTTTTCT TERM 3835 3054029 - 3054003 - f 100 -19.5 -3.55966 | opp_overlap 3054003 3053996 3053993, overlap 3053999 3053997 CCATTAAAATAGTAA GCAGTCCGGGC AATCA GCCCGGACTGC TTTAACTAATTATTT TERM 3836 3054003 - 3054029 + F 100 -19.5 -3.74658 | opp_overlap 3053999 3053997 3054003, overlap 3053996 3053993 CCATTAAAATAGTAA GCAGTCCGGGC AATCA GCCCGGACTGC TTTAACTAATTATTT TERM 3837 3055908 - 3055889 - g 85 -2.9 -5.34365 | gap 1, overlap 3055890 3055891 3055893 GGACAAGAACAAAAA GTCACTCT ACTGA AGAGTG-C TAAAACGGAATGGAA SF2965 3054452 - 3057967 + | superfamily I DNA helicase SF2966 3058307 - 3058672 + | hypothetical protein TERM 3838 3059620 - 3059582 - g 79 -9.7 -3.85698 | gap 1 CGTGCTGGTCAGAAA TTATGACAGCAG-CGCCT TCAA AGGCGACCGCTACCACAA CACGAAAAATGGCAT TERM 3839 3059655 - 3059630 - g 83 -6.1 -4.90906 | CCACAACACGAAAAA TGGCATCAACG CCGA CATCGGTGCCA GTACGGACCTGGATG SF2967 3059316 - 3060077 + | hypothetical protein TERM 3840 3060135 - 3060155 + F 78 -11.9 -3.05463 | opp_overlap 3060135 TTTCCATCATCAAAA GTCTGTCGG ACA TCGACAGAC TTAACTCCCCCGGAT TERM 3841 3060155 - 3060135 - f 91 -11.2 -4.30576 | opp_overlap 3060135 TTTCCATCATCAAAA GTCTGTCG GACAT CGACAGAC TTAACTCCCCCGGAT TERM 3842 3060225 - 3060211 - f 80 -7.2 -4.57581 | overlap 3060213 3060218 ACCGGAAACAACAAA GATCAA ATT TTGATC GCAAAATTCAAAATA TERM 3843 3061110 - 3061128 + GF 78 -5.3 -4.80882 | CAAAACTATAATCCC GACTTGT TAAGC GCAAGTC TTTTTAATCTGGACT sigA 3060438 - 3064295 + | serine protease TERM 3844 3064305 - 3064322 + GT 100 -14.1 -3.78934 | opp_overlap 3064299 3064301 3064302, overlap 3064302 TTCTGATAACAGCCC GGGCCGC GTTT GCGGCCC TTCTTCTACCGGAGA SF2969 3064225 - 3064923 + | hypothetical protein TERM 3845 3064975 - 3065002 + T 100 -18.6 -3.06133 | opp_overlap 3064968 3064965 AAATATCATTCATCA TGACCGGCGTTT GTAT AAACGCCGGTCA TTCGCTAACAGCTTC SF2970 3065673 - 3065326 - | hypothetical protein SF2971 3065799 - 3066305 + | hypothetical protein SF2972 3066392 - 3067306 + | hypothetical protein TERM 3846 3067706 - 3067725 + TF 72 -9.2 -3.53444 | opp_overlap 3067707, overlap 3067707 AAGAGTCTCTGAGAA AGGCTGCC TTCC GGCAGCCC TTTACCCCCACATCA TERM 3847 3067707 - 3067724 + TF 78 -12.7 -2.71924 | opp_overlap 3067707, overlap 3067706 AGAGTCTCTGAGAAA GGCTGCC TTCC GGCAGCC CTTTACCCCCACATC TERM 3848 3067724 - 3067707 - Tf 95 -12.7 -3.86524 | opp_overlap 3067707 3067706 AGAGTCTCTGAGAAA GGCTGCC TTCC GGCAGCC CTTTACCCCCACATC pic 3070950 - 3067738 - | serine protease precurser set1B 3069556 - 3069741 + | Shet1B set1A 3069745 - 3070278 + | Shet1A TERM 3849 3070854 - 3070872 + gT 73 -10.2 -2.99458 | overlap 3070851 AGTTTTTACTGCCCT GGCTCAGG GTA CCTGTGCC TGATGTTTTGTCGTA TERM 3850 3071913 - 3071899 - TR 73 -4.3 -4.75518 | overlap 3071910 3071911 GATATAAAAGTAAAA TAGCT GAAGA AGCTA ATGATAACCCGACGT SF2974 3072407 - 3072021 - | IS629 ORF2 TERM 3851 3072257 - 3072272 + g 75 -5.4 -4.67123 | AGTCACCAGTACTCC CTGTTG ATGC CAGCAG TTTTGCTTCTTTTAG SF2976 3074092 - 3072584 - | reverse transcriptase-like protein TERM 3852 3073955 - 3073970 + gH 72 -8.2 -3.72893 | CACGCCATCAACGCC GGGGGT ATGG GCCCCC TTTGATGAAAGCGTG SF2975 3074061 - 3074486 + | hypothetical protein SF2977 3074521 - 3074772 + | hypothetical protein SF2978 3075177 - 3074821 - | IS629 ORF2 TERM 3853 3074858 - 3074870 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF2979 3075500 - 3075174 - | IS629 ORF1 SF2980 3076208 - 3075783 - | hypothetical protein SF2981 3076588 - 3076205 - | hypothetical protein TERM 3854 3076867 - 3076847 - R 71 -10.5 -2.74144 | overlap 3076846 GTGTCATGGTTAAAT CTCCGTATG GTT CATACGGAA TGACCACGCCGTAAA SF2982 3077560 - 3076961 - | hypothetical protein SF2983 3078926 - 3077718 - | iso-IS10R ORF SF2984 3079615 - 3079980 + | insertion sequence 2 OrfA protein SF2985 3080056 - 3080844 + | insertion sequence 2 OrfB protein TERM 3855 3081231 - 3081246 + F 88 -3.4 -5.67063 | opp_overlap 3081231 TTCTGTAAATAATAC TAATTA ACCT TAATTA TTTTTTTATGGTACA TERM 3856 3081471 - 3081455 - f 73 -2.4 -5.19261 | AAATTCATTAAAAAA TTAATT GCATG AATTAA CAGGTTTTTTTATGA SF2986 3081531 - 3082322 + | hypothetical protein TERM 3857 3082566 - 3082547 - f 70 -5 -4.431 | opp_overlap 3082564 GATTCACTGACAAAA CAGACAAC CTGT ATTGCCTG TACACAACAGTTTCT SF2987 3082708 - 3082914 + | hypothetical protein TERM 3858 3083029 - 3083017 - g 76 -7.7 -4.24123 | GCAACAACTTGAAAA CAGGT GTG ACCTG CTGCTCATCCAGCAT TERM 3859 3083365 - 3083350 - g 71 -9 -3.5394 | AAACCGGCTGGCAAA CAGGCT GAAC AGCCTG CTCCGGCGTTTCGAC SF2988 3083000 - 3083572 + | hypothetical protein TERM 3860 3085843 - 3085825 - g 87 -4.5 -5.31519 | overlap 3085827 AGACTGAAACAAAAA CAGGATG AAAAA CATCCAG TACATAACCCAGTGA SF2989 3085141 - 3086160 + | hypothetical protein TERM 3861 3086215 - 3086240 + F 100 -12.6 -5.06052 | gap 1 TTATCTCCGTGAATC CCCCGC-CACC TTTCC GGTGCGCGGGG TTTTGTCTTTTTTCA sap 3086270 - 3087142 + | hypothetical protein TERM 3862 3087271 - 3087247 - f 83 -6.5 -4.92791 | opp_overlap 3087247 3087266 GATAATAGAATAAAA CGATCGATA CCTATTT TACCGATCG TTAATATCGATCGTT TERM 3863 3087411 - 3087438 + F 100 -20 -5.45652 | TGTAACCCTTTACCT GCCGGTATCCAC ATCT GTGGATACCGGC TTTTTTATTCACCCT TERM 3864 3090073 - 3090106 + G 74 -10.9 -3.1355 | CCGCGTCCGGGGCTG GGGCTGGCTGGGTTC GCTG GAAACCGGTCTGCCC TTCAGTATCACTGAC SF2991 3087470 - 3090598 + | outer membrane fluffing protein TERM 3865 3090605 - 3090661 + F 79 -10.2 -3.65199 | overlap 3090606 ACCTTCTGATAATTC TGCATTGCCTC-TCTGTGGTCCCGGTCA TGA TGACCGGGACC-CGGACGGGGGAAAACG TTTCAGTGCCACATT TERM 3866 3090606 - 3090660 + F 74 -11.5 -2.78798 | overlap 3090605 CCTTCTGATAATTCT GCATTGCCTC-TCTGTGGTCCCGGTCA TGA TGACCGGGACC-CGGACGGGGGAAAAC GTTTCAGTGCCACAT TERM 3867 3090815 - 3090795 - g 85 -13.3 -3.24747 | opp_overlap 3090794 3090795 TGTTCAGAGCATTAA CCAGCACAG CGT CTGCGCTGG CAGGGTTCATATTGC SF2992 3090719 - 3093235 + | hypothetical protein SF2993 3093311 - 3093766 + | hypothetical protein TERM 3868 3093790 - 3093820 + F 95 -12.6 -3.85698 | overlap 3093792 GTCAGTTTCATGCTT CAGCCTCTGCCACA ACG TATGGCAGAGGCTA TTTATCAGGAGAAAC TERM 3869 3093792 - 3093818 + F 100 -15.2 -3.51934 | overlap 3093790 CAGTTTCATGCTTCA GCCTCTGCCACA ACG TATGGCAGAGGC TATTTATCAGGAGAA TERM 3870 3094100 - 3094125 + F 100 -16.9 -5.46129 | GATTTCATCCATCAG GCCGCGTCTTC TCCG GGAGACGCGGC TTTTTTCATTTGTTG TERM 3871 3094349 - 3094365 + G 70 -3.5 -4.62069 | overlap 3094347 3094354 TGGAAAGTCTGCAGC GGGAAGG CTT CCAGCCC TTTTTCGCCTGCCAG SF2994 3094177 - 3094995 + | hypothetical protein TERM 3872 3095039 - 3095068 + F 100 -16.5 -3.34455 | gap 1, opp_overlap 3095037 3095034, overlap 3095034 GGCACCAGAATCACC CGACGCCCCGG-AG GCG CTGCCGGGGTGTCG TTCCATTTCTGATGA TERM 3873 3095148 - 3095131 - f 74 -8.5 -3.85817 | ACCGTCCCGGAGAAA TCAGTCT GTGC AGACTGA GTATACAGGCAATGG TERM 3874 3095254 - 3095279 + F 77 -10.5 -3.32844 | opp_overlap 3095248 CTGATATTACCGGGT CATCACGGTCA GTGA TGAACGTGATG TTGTCAGCTCCCGAC SF2995 3095337 - 3095810 + | hypothetical protein TERM 3875 3096221 - 3096270 + G 75 -5.7 -4.61566 | gap 1, overlap 3096206 3096210 GGTACAGGCACTGGC CCTGGTTGATATCCGGGTACCGGA CCA TCTGATAGTCGG-TGGCAGCCAGG TTTTCTCCTTTGCGG yeeS 3095811 - 3096302 + | RADC family DNA repair protein yeeT 3096389 - 3096610 + | hypothetical protein yeeU 3096690 - 3097067 + | putative structural protein yeeV 3097114 - 3097491 + | hypothetical protein yeeW 3097488 - 3097976 + | hypothetical protein SF3001 3097996 - 3098193 + | hypothetical protein TERM 3876 3098207 - 3098187 - f 93 -11.9 -3.65812 | opp_overlap 3098186 3098185 GTTTCTGCAACAGAA CCGGTGAGT CTT ACTCACCAG ACTTCATTCCACTGA TERM 3877 3098223 - 3098245 + F 100 -12 -4.65153 | overlap 3098217 ACTTCATTCCACTGA CGCCAGCC TGAATAC GGCTGGCG TTTTCGTTTATCTGC SF3002 3098278 - 3099120 + | hypothetical protein TERM 3878 3099281 - 3099266 - f 83 -10.4 -3.82824 | opp_overlap 3099266 CACTATTTAGAAGAA CCAGCC TACG GGCTGG TTTTTTGCTTTCTGG TERM 3879 3099266 - 3099281 + F 100 -10.4 -5.42514 | opp_overlap 3099266 CACTATTTAGAAGAA CCAGCC TACG GGCTGG TTTTTTGCTTTCTGG TERM 3880 3099390 - 3099402 + F 72 -5.5 -4.53705 | AAGTAGCCCCCTTCT GGTCA CTG TGGCC TTTTCTGTCAAACTT SF3003 3099723 - 3100931 + | iso-IS10R ORF SF3004 3101190 - 3101480 + | hypothetical protein SF3005 3101874 - 3102182 + | IS3 ORF1 TERM 3881 3102456 - 3102429 - g 75 -4.7 -4.74103 | overlap 3102430 3102431 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC SF3006 3102179 - 3103045 + | IS3 ORF2 SF3007 3103616 - 3103149 - | hypothetical protein SF3008 3103921 - 3103682 - | hypothetical protein SF3009 3104661 - 3104056 - | hypothetical protein insB 3105069 - 3104776 - | IS1 ORF2 insA 3105474 - 3105199 - | IS1 ORF1 TERM 3882 3105501 - 3105556 + r 84 -8.2 -4.67608 | gap 4, opp_overlap 3105508, overlap 3105508 AAAATCACCATCATA CACTAAATCAGTAAGTTGGCAG-CATTA CCGG TAATGACT-CCAACTTACTGA-T-AGTG TTTTATGTTCAGATA TERM 3883 3105551 - 3105508 - R 95 -13.4 -3.89956 | opp_overlap 3105508 3105501 CCATCATACACTAAA TCAGTAAGTTGGCAGCATTA CCGG TAATGACTCCAACTTACTGA TAGTGTTTTATGTTC TERM 3884 3105508 - 3105551 + r 82 -12.9 -3.02181 | opp_overlap 3105508, overlap 3105501 CCATCATACACTAAA TCAGTAAGTTGGCAG-CATTA CCGG TAATGACT-CCAACTTACTGA TAGTGTTTTATGTTC insB 3105838 - 3105545 - | IS1 ORF2 insA 3106243 - 3105968 - | IS1 ORF1 TERM 3885 3107664 - 3107690 + r 77 -7.3 -4.39696 | opp_overlap 3107664 ACAGACAAATGGAAA GCCGGGTGA TATTTACCT TCATCCGGC TTTATTGATTTACGA yghK 3109097 - 3107700 - | putative permease TERM 3886 3108033 - 3108021 - G 71 -3.3 -4.86033 | overlap 3108032 AAACGGTGAGAAAAA CGGGA ACA TCACG CCTGTACCTGCCAGT TERM 3887 3108237 - 3108224 - G 81 -4.5 -5.06414 | overlap 3108210 3108227 TCGCCGCAATAAAAA TAGCG GTGC CGCCA GCCGAGAGAGGGTCG TERM 3888 3108543 - 3108555 + g 72 -5.5 -4.56597 | TTGCCCCATGCTGAT TGCCG TTT CGGTA TTTTTCGGCCGCCAG TERM 3889 3109629 - 3109604 - R 79 -12.6 -2.83164 | opp_overlap 3109604 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT TERM 3890 3109604 - 3109629 + r 100 -10.4 -5.04987 | opp_overlap 3109604 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT glcB 3111814 - 3109643 - | malate synthase G glcG 3112240 - 3111836 - | hypothetical protein TERM 3891 3112042 - 3112057 + g 72 -7.5 -3.96327 | TTTCACGACGCCCCA GCGCG GCGGTA CGCGC TTTCTCCTGGGAGAT TERM 3892 3114194 - 3114172 - H 72 -5.4 -4.46212 | overlap 3114173 3114174 3114184 GTGCCGAGGACAAAA TCGCGGACCG AAC CGCTCCACGG GCGACGCGGCCCCGC glcC 3116277 - 3117047 + | DNA-binding transcriptional regulator GlcC TERM 3893 3117725 - 3117736 + F 83 -4.4 -5.40072 | CACCTTTTTGCGCAC CTGA TCCA TCAG TTTTTTTAGCGCCGG TERM 3894 3118146 - 3118157 + F 74 -5.8 -4.56597 | TGCCAGATGATATGG TCCG TCCC CGGA TTTTTCGCAGACAAA TERM 3895 3118916 - 3118893 - g 77 -3 -5.09426 | gap 1, opp_overlap 3118898 CTGAACCTGAAAAAA GGCGAAC-GCG TGG CGCTGATTGCC GAAACGAGTAGCGGG TERM 3896 3120139 - 3120151 + G 70 -4.1 -4.63218 | CGGAAATTCATTCTG GCGAT GCG ATTGC TTTTGTTACCGCCCA SF3021 3118716 - 3120404 + | acyl-CoA synthetase TERM 3897 3120844 - 3120807 - g 70 -9.9 -3.16039 | gap 1 AACGACTGGCAGCAA TGGCGGACGAAATTACGC TGG GCGTT-TTTCGCCCGACA GCCGTGTATGGTCCC SF3022 3120419 - 3121315 + | hypothetical protein SF3023 3121348 - 3121596 + | hypothetical protein SF3024 3121596 - 3121946 + | putative class II aminotransferase SF3025 3121979 - 3122767 + | putative class II aminotransferase TERM 3898 3122774 - 3122801 + T 100 -20.6 -3.99878 | opp_overlap 3122768 3122769 AAGCAGTAATGTGAG CCCGCCGTGGTG TTTG CGCCACGGCGGG TTTAATGTTGTCTGT SF3026 3123882 - 3122803 - | hypothetical protein SF3027 3124949 - 3123879 - | hypothetical protein TERM 3899 3124962 - 3124975 + r 86 -5.3 -5.5604 | CATCTCACTAACGCC CTCAA TCCT TTGAG TTTTTTATTCATTGA SF3028 3125540 - 3124980 - | hypothetical protein TERM 3900 3125125 - 3125174 + g 82 -2.8 -5.21683 | gap 1, overlap 3125116 AAGCGCCAGGCAACG CGTCCCTGTCCATTGCCGTCAAT AACGA ATTG-CGCCCACGGATAGCGGCG TTTATTTTTTTCGAT SF3029 3126376 - 3125552 - | hypothetical protein yghQ 3127725 - 3126376 - | hypothetical protein yghR 3128529 - 3127771 - | hypothetical protein TERM 3901 3128223 - 3128247 + g 72 -7 -4.24384 | opp_overlap 3128223 3128226, overlap 3128218 AGAAGCAGTACATAA TCACCGCCGC CCATA GCGCCGGAGA TTTGGTTTTCATGCT yghS 3129274 - 3128561 - | hypothetical protein yghT 3129448 - 3130140 + | hypothetical protein TERM 3902 3130182 - 3130148 - T 100 -13.7 -4.68994 | opp_overlap 3130154 ATCACTAGTCAAAAA TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA GGAAGGTTAAATCAA TERM 3903 3130154 - 3130176 + T 79 -9.1 -4.08692 | opp_overlap 3130148 AGTCAAAAATGGAAA TGCCCGATC GCCAG GACCGGGCA TTTTCAGGAAGGTTA pitB 3131688 - 3130189 - | low-affinity phosphate transport protein TERM 3904 3131965 - 3131929 - R 83 -13.2 -3.16668 | opp_overlap 3131930 3131964 GAATATTTTGATTAA TCCCCGTACTAATTAT TCTTC ATAATCAGTACGGGGT TGCTACAACATGTAT TERM 3905 3131930 - 3131964 + r 90 -14.5 -3.15249 | opp_overlap 3131929 AATATTTTGATTAAT CCCCGTACTAATTAT TCTTC ATAATCAGTACGGGG TTGCTACAACATGTA gsp 3133839 - 3131980 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 3906 3134501 - 3134522 + G 72 -5.8 -4.34771 | gap 1 TCTGGTTACAGGGTG CCGC-GCCG TTCCT CGGCGGTGG TTTTGGTCACTTTTA TERM 3907 3134704 - 3134730 + G 81 -10.1 -3.91897 | TTTGGCAACGTGGTG CTCGGCGGCGT GTATG ATGCCGCAGAG TTTCTGGATGCGGGA SF3036 3133996 - 3134910 + | putative glutathione S-transferase YghU TERM 3908 3135017 - 3134984 - T 73 -9.5 -3.31322 | opp_overlap 3134991 3134992 3134994, overlap 3134952 3134985 GGCAATCGTGCACAA TGCCTGATGCGACGC TGCC GCGTCTTATCAGGCC TACAAAAGCTAATCA TERM 3909 3135016 - 3134985 - T 81 -13 -2.58579 | opp_overlap 3134991 3134992 3134994, overlap 3134952 3134984 GCAATCGTGCACAAT GCCTGATGCGACGC TGCC GCGTCTTATCAGGC CTACAAAAGCTAATC hybG 3135281 - 3135033 - | hydrogenase 2 accessory protein HypG hypA 3135756 - 3135415 - | hydrogenase nickel incorporation protein HybF TERM 3910 3135658 - 3135623 - G 88 -8.4 -4.67641 | gap 2, opp_overlap 3135623 3135624, overlap 3135624 3135625 3135627 ATTTCAAAACTAAAA CGGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CCA ATTTCCAGCCACACG TERM 3911 3135657 - 3135624 - G 72 -9.7 -3.395 | gap 2, opp_overlap 3135624 3135623, overlap 3135623 3135625 3135627 TTTCAAAACTAAAAC GGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CC AATTTCCAGCCACAC TERM 3912 3135657 - 3135625 - G 76 -12.1 -2.62977 | gap 1, opp_overlap 3135624 3135623, overlap 3135624 3135623 3135627 TTCAAAACTAAAACG GACGGCGCTCTCCT CAACGC AGGAGAGCGC-GCC AATTTCCAGCCACAC TERM 3913 3135655 - 3135627 - G 71 -11.1 -2.84272 | gap 1, opp_overlap 3135624 3135623, overlap 3135624 3135625 3135623 CAAAACTAAAACGGA CGGCGCTCTCCT CAACGC AGGAGAGCGC-G CCAATTTCCAGCCAC hybE 3136237 - 3135749 - | hydrogenase 2-specific chaperone TERM 3914 3135802 - 3135779 - G 90 -13.2 -3.53012 | gap 1, opp_overlap 3135766 3135780, overlap 3135781 CCTCCTGCGGCCAAA CA-GCAGGGCG CGA CGCCCTGCGTG TGGTACATCCGGATT TERM 3915 3135780 - 3135800 + g 77 -12.5 -2.80816 | opp_overlap 3135779 3135781, overlap 3135766 CTCCTGCGGCCAAAC AGCAGGGCG CGA CGCCCTGCG TGTGGTACATCCGGA TERM 3916 3135799 - 3135781 - G 100 -16 -3.34398 | opp_overlap 3135780 3135766, overlap 3135779 TCCTGCGGCCAAACA GCAGGGCG CGA CGCCCTGC GTGTGGTACATCCGG hybD 3136724 - 3136230 - | hydrogenase 2 maturation endopeptidase TERM 3917 3136371 - 3136386 + g 70 -4.6 -4.57569 | CGATTCCGGGATCAC GCCGAC CAGG GTCAGC TTTTTCGGAAACTCA hybC 3138427 - 3136724 - | hydrogenase 2 large subunit TERM 3918 3137398 - 3137410 + g 78 -10.5 -3.50335 | overlap 3137394 3137406 TGGTACCTTCCCACG GCGCC TGT GGCGC TTCGTCTTTATACCA TERM 3919 3138273 - 3138287 + g 72 -4.9 -4.61633 | opp_overlap 3138265, overlap 3138276 3138280 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 3920 3138446 - 3138457 + r 76 -4.4 -5.07652 | overlap 3138435 3138440 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3139602 - 3138424 - | putative hydrogenase 2 b cytochrome subunit hybA 3140578 - 3139592 - | hydrogenase 2 protein HybA TERM 3921 3140235 - 3140248 + g 72 -6.7 -4.29106 | CAGTTCGGATCGACG CAGTG CATA CACTG TTTCTTAATGTACGC SF3044 3141699 - 3140581 - | hydrogenase 2 small subunit SF3045 3142175 - 3141888 - | hypothetical protein TERM 3922 3142188 - 3142213 + r 79 -10.7 -3.63744 | overlap 3142187 CATCGTTCACCTCAT TCGTTATATAT CGCC ATATATAACGA TATTTTAGGCAAAGA SF3046 3142704 - 3142294 - | hypothetical protein TERM 3923 3143889 - 3143902 + G 70 -4.5 -4.45544 | CGAGTTGCTGCACGA GTGGA AAAT TCCGC TTTTAATTCATCAAC SF3047 3143338 - 3144378 + | aldo-keto reductase TERM 3924 3144410 - 3144390 - T 100 -15.4 -3.62775 | overlap 3144379 ATGACCTGTTAATAA CGGGCGCG CGAAC CGCGCCCG AATCAGATCAGTGAT yqhA 3144912 - 3144418 - | hypothetical protein yghA 3145103 - 3145987 + | oxidoreductase TERM 3925 3145993 - 3146019 + T 87 -14.5 -2.86539 | opp_overlap 3145993, overlap 3145972 3145990 TTTAGGTTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTGTGAATTCAC TERM 3926 3146019 - 3145993 - T 100 -13.8 -5.44119 | opp_overlap 3145972 3145990 3145993 TTTAGGTTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTGTGAATTCAC TERM 3927 3146224 - 3146250 + T 72 -10.8 -2.78298 | overlap 3146223 GCAATAGATTTTGTA GGCCTGATGAGC GTA GCGCATCAGGCA ATTCTACTTTACTTC exbD 3146684 - 3146259 - | biopolymer transport protein ExbD exbB 3147425 - 3146691 - | biopolymer transport protein ExbB SF3052 3147573 - 3147418 - | hypothetical protein TERM 3928 3147674 - 3147664 - H 73 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 3929 3147817 - 3147805 - g 85 -6.9 -4.75174 | overlap 3147808 TATGGAAGCCAAAAA GCACG CGA CGCGC AATCGCGCCAATGGC metC 3147677 - 3148864 + | cystathionine beta-lyase TERM 3930 3149366 - 3149392 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT yghB 3149004 - 3149663 + | hypothetical protein TERM 3931 3149674 - 3149699 + TF 86 -11.9 -3.5486 | overlap 3149672 CCTGACGATTTTCCC CGTTCCCGG CTGCTGTA CCGGGAACG TATTTAATTCCCCTG yqhC 3150830 - 3149703 - | putative ARAC-type regulatory protein TERM 3932 3151699 - 3151684 - gH 71 -3.2 -4.8622 | CTGTGGAATGAAAAA CGCG AGACCAAG CGCG CTAAGCTGCTGCAAT yqhD 3150796 - 3151959 + | putative oxidoreductase TERM 3933 3152046 - 3152017 - fH 77 -10.7 -3.36968 | opp_overlap 3152020, overlap 3152019 3152020 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 3934 3152044 - 3152019 - fH 83 -13.3 -3.25192 | opp_overlap 3152020, overlap 3152017 3152020 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 3935 3152020 - 3152043 + FH 100 -16.8 -3.25823 | opp_overlap 3152020 3152019 3152017 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 3936 3152043 - 3152020 - fH 95 -16.8 -2.54794 | opp_overlap 3152020, overlap 3152019 3152017 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3152064 - 3152891 + | 2,5-diketo-D-gluconate reductase A TERM 3937 3152903 - 3152933 + F 73 -7.4 -4.10429 | overlap 3152904 CTAACGTGCAAATTC TCCCGGTGGCGGTA ATG TTCCGCTACCGGAC TTTTCAGAAATCATT TERM 3938 3152904 - 3152932 + F 75 -10.9 -3.05775 | overlap 3152903 TAACGTGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT yqhG 3153091 - 3154017 + | hypothetical protein yqhH 3154068 - 3154325 + | putative outer membrane lipoprotein TERM 3939 3154361 - 3154334 - T 100 -12.7 -5.73339 | opp_overlap 3154334 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC TERM 3940 3154334 - 3154361 + T 100 -14.9 -5.78622 | opp_overlap 3154334 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC SF3060 3155609 - 3154368 - | hypothetical protein TERM 3941 3154427 - 3154439 + g 90 -4.8 -5.44119 | TCACCGGACGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC TERM 3942 3155436 - 3155419 - G 72 -6.9 -4.25957 | overlap 3155416 ATAGAACAGAAAGAA CAGCCGC CAAA GCAGCCG CGCATAATGTTGACC TERM 3943 3156701 - 3156660 - R 71 -7.4 -3.93913 | gap 1, overlap 3156661 3156664 AAAGAGAAATCGAAA GGTAT-TCCATACTCGCCC TCCTC GGGCGAGTATGAAGATTAC GGTACCGGATTGACC TERM 3944 3156696 - 3156664 - R 78 -12.8 -2.6993 | overlap 3156660 3156661 AGAAATCGAAAGGTA TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG ATTACGGTACCGGAT sufI 3158110 - 3156698 - | repressor protein for FtsI plsC 3158922 - 3158185 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase parC 3161414 - 3159156 - | DNA topoisomerase IV subunit A TERM 3945 3160585 - 3160606 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACGC TERM 3946 3161543 - 3161517 - R 75 -11.5 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGACGGCGA TAAAGGCATCAATGT SF3064 3162442 - 3161960 - | hypothetical protein ygiW 3162887 - 3162495 - | hypothetical protein ygiX 3163039 - 3163698 + | DNA-binding transcriptional regulator QseB TERM 3947 3163947 - 3163926 - g 70 -3.7 -4.72863 | CCAAATAAATTAAAA CACGGTCAT GTTG ATGACGATG CGCTGACCTTTGCCA ygiY 3163695 - 3164969 + | sensor protein QseC TERM 3948 3164978 - 3165009 + F 100 -14.6 -4.30576 | opp_overlap 3164987 CTGGTAACTTCTCTG TCTATGAGAGCCGT TAAA ACGACTCTCATAGA TTTTACTAATAGCAA TERM 3949 3165381 - 3165401 + F 74 -5.5 -4.56729 | opp_overlap 3165381 3165380 3165383 AAATCCATTTATAAT TATCAACAT GAC ACGTTGATA TTTTCATCTTTTACT TERM 3950 3165783 - 3165728 - g 81 -12.6 -3.18199 | gap 1, opp_overlap 3165736 3165760, overlap 3165731 CAATGGTCAACTGAA CGACACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATGTCC GCATCGTTCGCGCCG TERM 3951 3165780 - 3165731 - g 81 -12.9 -2.78712 | gap 1, opp_overlap 3165736 3165760, overlap 3165728 TGGTCAACTGAACGA CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATG TCCGCATCGTTCGCG mdaB 3165666 - 3166247 + | modulator of drug activity B ygiN 3166278 - 3166592 + | hypothetical protein TERM 3952 3166602 - 3166630 + T 71 -7.3 -4.15396 | overlap 3166604 ATTTAATCCTGCCTT GTTTGCCCGGCCA TCC TGACCGGGCAATG TTCTTTCCTTTAAAC TERM 3953 3166604 - 3166628 + T 100 -14.3 -3.66578 | overlap 3166602 TTAATCCTGCCTTGT TTGCCCGGCCA TCC TGACCGGGCAA TGTTCTTTCCTTTAA parE 3168532 - 3166640 - | DNA topoisomerase IV subunit B TERM 3954 3168261 - 3168236 - G 78 -10.5 -3.48395 | ATTTTTGTTAGAGAA TTTACCGCCTG CATG CAGACGGCAAA GAATCAGTTCAACCG yqiA 3169142 - 3168561 - | esterase YqiA icc 3169969 - 3169142 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase TERM 3955 3169953 - 3169921 - G 100 -14.2 -4.14392 | opp_overlap 3169912 3169911, overlap 3169922 CGGTAATTTGTAAAA TCCTTCCTCTGGCC TCACC AGCCAGAGGAAGGG TTAACAGGCTTTCCA TERM 3956 3169952 - 3169922 - G 100 -17.7 -3.08314 | opp_overlap 3169912 3169911, overlap 3169921 GGTAATTTGTAAAAT CCTTCCTCTGGCC TCACC AGCCAGAGGAAGG GTTAACAGGCTTTCC yqiB 3170416 - 3169994 - | hypothetical protein TERM 3957 3170083 - 3170093 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA TERM 3958 3170441 - 3170493 + r 74 -6.9 -4.20712 | overlap 3170449 CTCATTTTTTAACGC TTGATGATGCAGCTGCAGCCATTGC AAA GCGATGACCGACGCTGCGTTGTCGA TTTTCCCCTCTTCTA nudF 3171046 - 3170417 - | ADP-ribose pyrophosphatase NudF tolC 3171251 - 3172732 + | outer membrane channel protein TERM 3959 3172959 - 3172970 + G 71 -2.2 -4.9218 | overlap 3172958 CACCAGTCGCTCTCG CGGT TGCC ACTG TTTTTATGCTGGCTG ygiA 3172732 - 3172992 + | hypothetical protein TERM 3960 3173410 - 3173380 - gf 88 -8.3 -4.59773 | gap 1, overlap 3173381 3173383 CGCGACGGGTAAAAA CTATGGCGCAGCCC AGCC AGGCCGCACCAT-G ACCGTACCGAAGACG TERM 3961 3173408 - 3173383 - gf 77 -11.1 -3.24422 | overlap 3173380 3173381 GACGGGTAAAAACTA TGGCGCAGCCC AGCC AGGCCGCACCA TGACCGTACCGAAGA TERM 3962 3173517 - 3173499 - gf 70 -5.2 -4.41348 | CTGTTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC ygiB 3172880 - 3173551 + | hypothetical protein TERM 3963 3173619 - 3173663 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 3173633, overlap 3173622 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGAC TERM 3964 3173622 - 3173660 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 3173633, overlap 3173619 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT ygiC 3173557 - 3174717 + | putative synthetase/amidase TERM 3965 3174759 - 3174718 - T 75 -9.6 -3.61517 | gap 2, opp_overlap 3174724 3174725 3174727, overlap 3174727 ATTTTTGTTGAATAA GCCA-CGA-TACCGGATGGC ACTC GCCATCCGGTAATTGTTAGC CTATCTGCACCGACA TERM 3966 3174724 - 3174751 + T 100 -14.2 -3.67558 | opp_overlap 3174718 3174727, overlap 3174725 3174727 GTTGAATAAGCCACG ATACCGGATGGC ACTC GCCATCCGGTAA TTGTTAGCCTATCTG TERM 3967 3174725 - 3174750 + T 100 -17.7 -2.80053 | opp_overlap 3174718 3174727, overlap 3174724 3174727 TTGAATAAGCCACGA TACCGGATGGC ACTC GCCATCCGGTA ATTGTTAGCCTATCT TERM 3968 3174727 - 3174748 + T 93 -15.9 -2.94313 | opp_overlap 3174727 3174718, overlap 3174725 3174724 GAATAAGCCACGATA CCGGATGGC ACTC GCCATCCGG TAATTGTTAGCCTAT TERM 3969 3174748 - 3174727 - T 93 -15.9 -2.84619 | opp_overlap 3174725 3174724 3174727, overlap 3174718 GAATAAGCCACGATA CCGGATGGC ACTC GCCATCCGG TAATTGTTAGCCTAT ygiD 3175570 - 3174755 - | hypothetical protein ygiE 3175686 - 3176459 + | zinc transporter ZupT TERM 3970 3176506 - 3176463 - T 72 -4.7 -4.59853 | gap 1, opp_overlap 3176474 3176503, overlap 3176466 3176468 3176469 3176471 GGAATTGGTTAAAAA CAAC-ATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCAGCTT CACGAAAGCCTTATT TERM 3971 3176502 - 3176466 - T 95 -11 -4.40963 | opp_overlap 3176474, overlap 3176463 3176468 3176469 3176471 ATTGGTTAAAAACAA CATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCA GCTTCACGAAAGCCT TERM 3972 3176500 - 3176468 - T 100 -13.6 -3.80746 | opp_overlap 3176474, overlap 3176466 3176463 3176469 3176471 TGGTTAAAAACAACA TCAGAAGTTGTCCA GCACA TGGACAACTTCTGC CAGCTTCACGAAAGC TERM 3973 3176499 - 3176469 - T 100 -17.1 -2.87725 | opp_overlap 3176474, overlap 3176468 3176466 3176463 3176471 GGTTAAAAACAACAT CAGAAGTTGTCCA GCACA TGGACAACTTCTG CCAGCTTCACGAAAG TERM 3974 3176497 - 3176471 - T 85 -13.9 -2.97636 | opp_overlap 3176474, overlap 3176469 3176468 3176466 3176463 TTAAAAACAACATCA GAAGTTGTCCA GCACA TGGACAACTTC TGCCAGCTTCACGAA TERM 3975 3176474 - 3176494 + T 73 -9.8 -3.31322 | opp_overlap 3176471 3176469 3176468 3176466 3176463 AAAACAACATCAGAA GTTGTCCA GCACA TGGACAAC TTCTGCCAGCTTCAC TERM 3976 3176913 - 3176892 - T 86 -5.1 -5.46706 | opp_overlap 3176892 AGGGCAAAATAAAAA CCGAAGCCA GCTA CAACTTCGG TTTCTTGATTAAGGC ribB 3177601 - 3176948 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 3977 3177316 - 3177344 + g 90 -10.3 -4.41206 | opp_overlap 3177321 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT SF3082 3177915 - 3178265 + | hypothetical protein TERM 3978 3178282 - 3178318 + F 78 -6.2 -4.7033 | gap 1, opp_overlap 3178284 CATTTGTCTTTAATG CACTGTAAATTATGA ATTAATCC TC-TAATTTACAGTG TTTTCTATTACATTA SF3083 3178521 - 3178886 + | insertion sequence 2 OrfA protein SF3084 3178844 - 3179695 + | insertion sequence 2 OrfB protein insA 3179746 - 3180021 + | IS1 ORF1 insB 3180048 - 3180443 + | IS1 ORF2 SF3087 3180468 - 3180728 + | IS4 orf TERM 3979 3180739 - 3180710 - T 89 -9.3 -4.59109 | opp_overlap 3180703, overlap 3180712 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACCGTTAGTGAG TERM 3980 3180737 - 3180712 - T 100 -16.3 -3.90762 | opp_overlap 3180703, overlap 3180710 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACCGTTAGTG TERM 3981 3181114 - 3181089 - T 77 -11.9 -2.81584 | opp_overlap 3181094, overlap 3181094 ATCTAATACAAACAC TAAAACGGGCC ATCA GGCCCGTTATA TCAGTGCTCTAACTC TERM 3982 3181094 - 3181109 + T 86 -11.8 -3.53164 | opp_overlap 3181089 3181094 ATACAAACACTAAAA CGGGCC ATCA GGCCCG TTATATCAGTGCTCT TERM 3983 3181109 - 3181094 - T 100 -11.8 -4.5394 | opp_overlap 3181094, overlap 3181089 ATACAAACACTAAAA CGGGCC ATCA GGCCCG TTATATCAGTGCTCT glgS 3181315 - 3181115 - | glycogen synthesis protein GlgS insB 3181942 - 3182334 + | IS1 ORF2 TERM 3984 3183294 - 3183316 + F 100 -8.4 -5.4251 | opp_overlap 3183293 TTTCAGCTATGAACG TCCCTGGC ACAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3985 3183495 - 3183476 - f 86 -11.4 -3.71649 | overlap 3183460 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTACAGAAGGAAAG TERM 3986 3183670 - 3183692 + F 100 -8.4 -5.4251 | opp_overlap 3183668 3183666 3183670 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3987 3183871 - 3183852 - f 86 -11.4 -3.71649 | opp_overlap 3183852 3183851, overlap 3183835 3183845 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG TERM 3988 3184045 - 3184067 + F 100 -8.4 -5.4251 | opp_overlap 3184043 3184041 3184045 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3989 3184246 - 3184227 - g 88 -11.4 -3.71649 | opp_overlap 3184227 3184226, overlap 3184210 3184220 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG SF3092 3184127 - 3184378 + | hypothetical protein SF3093 3185878 - 3184445 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase glnE 3188766 - 3185926 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 3990 3186919 - 3186894 - G 72 -11.1 -3.06261 | opp_overlap 3186886 3186916 CCGCAATGCGTAACA GCTGCGCCTGT TTGA ACTGACGCAGC GCCTCAAGCTGTTGT TERM 3991 3187941 - 3187924 - G 70 -4 -4.6951 | ACGACGGAAAACAAA CGGGCG CAGCAT CGCACG CAACTCGTTAGCATA TERM 3992 3188737 - 3188703 - G 81 -9.3 -4.07687 | gap 1, opp_overlap 3188703 ATTCCTCGGCTAAAA GCTCTGGCAG-CCGCT CAAC AACGGTCTGCCAGTAC TGCTGTAACGGTGAA ygiF 3190090 - 3188789 - | hypothetical protein TERM 3993 3189145 - 3189119 - G 72 -5 -4.65895 | opp_overlap 3189106, overlap 3189120 TTTGGCATCTAAAAA CGGCTGCCATGC TTT GCTTACCAGCCA TTCGGTCAACGCCAG TERM 3994 3189739 - 3189723 - G 71 -2.9 -4.82901 | TTTTCGCGATAAAAA TCGGTGC TAA ACAGCGA CTGCACGCGGGAAGC TERM 3995 3190764 - 3190754 - g 83 -5.4 -5.093 | GTTAAAAGAAGAAAA TCAG AAA CTGA AAAACGAGCTGATTG ygiM 3190332 - 3190952 + | putative signal transduction protein TERM 3996 3191122 - 3191149 + G 95 -11.2 -4.47397 | overlap 3191123 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTGTTTCT TERM 3997 3191123 - 3191148 + G 95 -14.7 -3.26811 | overlap 3191122 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTGTTTC TERM 3998 3191221 - 3191233 + G 90 -9.1 -4.4773 | opp_overlap 3191208 3191215 AACGGAAATCCGGTT CCGGT TAC ACCGG TTTTACTTGCTATAC TERM 3999 3191424 - 3191434 + G 78 -8.2 -4.2679 | overlap 3191423 3191424 CCGTTACGCGTACTG CGCG TGG CGCG TTTTGCTGCGCGTTA TERM 4000 3191607 - 3191628 + G 75 -5.1 -4.63218 | gap 1 TTCTTCCAGGTACTG CGCG-ATTGC GGC GCACTTCGCG TTTTATTCCCGGAAA cca 3191016 - 3192254 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase uppP 3193238 - 3192417 - | undecaprenyl pyrophosphate phosphatase folB 3193697 - 3193329 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiP 3195363 - 3194362 - | transcriptional activator TtdR ygiH 3193802 - 3194419 + | putative glycerol-3-phosphate acyltransferase PlsY ttdA 3195573 - 3196382 + | tartrate dehydratase subunit alpha TERM 4001 3196964 - 3196949 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 3196410 - 3197015 + | L(+)-tartrate dehydratase subunit beta TERM 4002 3197023 - 3197042 + F 89 -9.3 -4.57073 | opp_overlap 3197016 3197017 TCAAATAACCCTCCC GGAGAGG CTCACC CCTCTCC TTTTTCGCAGGCATA TERM 4003 3197228 - 3197264 + G 71 -11 -2.91912 | gap 1, overlap 3197232 CCCGTGCCGGGTGCC GTGGTGGCGATGGTGGG TATC TCCATCATCGCCAT-AC TCTCTCCCTGGCTGC TERM 4004 3197232 - 3197261 + G 90 -15.1 -2.7035 | overlap 3197228 TGCCGGGTGCCGTGG TGGCGATGGTGGG TATC TCCATCATCGCCA TACTCTCTCCCTGGC TERM 4005 3197468 - 3197458 - g 72 -5.4 -4.57073 | opp_overlap 3197465 GATTCTGGTGAAAAA GATG GGG CATC GCACGCTGTTTCTCG ygjE 3197063 - 3198526 + | hypothetical protein ygjD 3199581 - 3198568 - | O-sialoglycoprotein endopeptidase TERM 4006 3198701 - 3198726 + g 84 -3.9 -5.243 | gap 1, overlap 3198699 GTACAAAATTCCGGA CGC-GCGTAGAA CAC TTCGCCGCGGCG TTTTTTCATCATTTC TERM 4007 3198964 - 3198952 - G 72 -5.5 -4.50976 | overlap 3198959 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 4008 3199500 - 3199515 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 4009 3199786 - 3199769 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3199819 - 3200034 + | 30S ribosomal protein S21 TERM 4010 3200078 - 3200111 + F 82 -7.6 -4.62475 | overlap 3200082 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 4011 3200082 - 3200108 + F 95 -10.9 -4.40882 | gap 1, overlap 3200078 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 4012 3200595 - 3200580 - g 70 -3.9 -4.60487 | opp_overlap 3200594, overlap 3200594 CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCTCGCT TERM 4013 3201477 - 3201444 - g 70 -5.9 -4.20696 | opp_overlap 3201444 3201455, overlap 3201436 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 3200145 - 3201890 + | DNA primase TERM 4014 3202858 - 3202838 - g 73 -9.1 -3.60948 | GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTGCCG rpoD 3202085 - 3203926 + | RNA polymerase sigma factor RpoD TERM 4015 3204049 - 3204074 + F 100 -9.8 -5.61596 | opp_overlap 3204049 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 4016 3204074 - 3204049 - f 72 -9.1 -3.61398 | opp_overlap 3204049 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SF3109 3204064 - 3205410 + | IS4 orf TERM 4017 3205421 - 3205392 - f 89 -9.3 -4.59109 | opp_overlap 3205393, overlap 3205394 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCCCCCGGTGAC TERM 4018 3205393 - 3205420 + F 81 -12.8 -3.14564 | opp_overlap 3205392 3205394 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCCCCGGTGA TERM 4019 3205419 - 3205394 - f 100 -16.3 -3.90762 | opp_overlap 3205393, overlap 3205392 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCCCCGGTG TERM 4020 3206160 - 3206181 + F 100 -14.5 -5.71295 | opp_overlap 3206160 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 4021 3206181 - 3206160 - f 100 -14.5 -3.91597 | opp_overlap 3206160 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 4022 3207347 - 3207390 + G 77 -6.6 -4.49556 | gap 1, overlap 3207357 CATGAACACGGTCAA TGTTG-CGGTGGTCGCCACGG TCG CGGCGGCGGTCGTCGGCAACG TTTCTTTGGTCACGG TERM 4023 3207811 - 3207796 - g 100 -3.3 -5.72622 | opp_overlap 3207803 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT yqjI 3207224 - 3207847 + | hypothetical protein TERM 4024 3207892 - 3207848 - f 74 -10.6 -3.1886 | opp_overlap 3207865, overlap 3207849 ACGCAACTGGATTAA TCGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACGC TTGACGCGCCTTATC TERM 4025 3207891 - 3207849 - f 83 -14.1 -2.50994 | opp_overlap 3207865, overlap 3207848 CGCAACTGGATTAAT CGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACG CTTGACGCGCCTTAT TERM 4026 3207936 - 3207967 + F 76 -11.6 -2.64099 | opp_overlap 3207945 3207947, overlap 3207935 CTACACACCCCGCAG GCCTGATAAGATGC GCCA GCATCGCATCAGGC ATTGTGCTCCAACCG TERM 4027 3208016 - 3208045 + F 82 -11.3 -3.57144 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA TERM 4028 3209731 - 3209712 - f 74 -5.8 -4.57073 | gap 1, overlap 3209715 TATCTTGCCCAAAAA TCA-GGCAA TTA TTGCCCTGA AAACGTGCATTTGCG ygjG 3209912 - 3211318 + | putrescine--2-oxoglutarate aminotransferase TERM 4029 3211324 - 3211356 + F 100 -12.8 -4.82901 | opp_overlap 3211326, overlap 3211326 AGAAGCGTAATATCA AATCGGATGGCGAT ACGAC GTCGCCATCCGATC TTTTTATACGACGCG TERM 4030 3211354 - 3211326 - f 100 -14.7 -3.9344 | opp_overlap 3211326 3211324 AAGCGTAATATCAAA TCGGATGGCGA TACGACG TCGCCATCCGA TCTTTTTATACGACG TERM 4031 3211326 - 3211354 + F 100 -15.4 -4.03995 | opp_overlap 3211326, overlap 3211324 AAGCGTAATATCAAA TCGGATGGCGAT ACGAC GTCGCCATCCGA TCTTTTTATACGACG TERM 4032 3211555 - 3211568 + F 70 -2.3 -5.0133 | overlap 3211540 CGGCACCAGGCTGGT CACGG TTTG CAGTG TTTTTTCCCCACATC TERM 4033 3212836 - 3212818 - g 95 -10.2 -4.72272 | opp_overlap 3212831 CTGGTGTATGAAAAA GCCCGCGA TGG TCGCGCGC TGCCGCTGCTAGTCT ebgR 3211909 - 3212892 + | DNA-binding transcriptional repressor EbgR TERM 4034 3212899 - 3212941 + F 73 -4.2 -4.73614 | gap 1, opp_overlap 3212906, overlap 3212900 3212901 ACCCGTTAAATCCCC TTACA-CACTGTTCGGCAA TCATTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC TERM 4035 3213215 - 3213227 + G 91 -7.7 -5.03314 | GCCCTTAAGCAGTCA GTGGA ATT TCCAC TTTTTTGACCATCCG TERM 4036 3213898 - 3213885 - g 75 -4.5 -4.74103 | opp_overlap 3213885 TTGGCAATTGAAAAA CTGAC CAGC GCCAG CTTTGCTTTTACTGT TERM 4037 3215032 - 3215010 - g 72 -7.6 -3.8647 | ACGCAGCAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTGCA ebgA 3213075 - 3216161 + | cryptic beta-D-galactosidase subunit alpha TERM 4038 3216576 - 3216588 + G 72 -7.7 -3.96216 | opp_overlap 3216576 3216573 3216572 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 3216158 - 3216607 + | cryptic beta-D-galactosidase subunit beta TERM 4039 3216644 - 3216608 - f 76 -8 -4.27512 | overlap 3216611 3216614 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCACCGCTA CCCTACACATTTTCG TERM 4040 3216641 - 3216611 - f 87 -9.7 -4.24183 | overlap 3216608 3216614 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCACCG CTACCCTACACATTT TERM 4041 3216638 - 3216614 - f 80 -12.2 -3.09866 | overlap 3216611 3216608 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCA CCGCTACCCTACACA TERM 4042 3216916 - 3216902 - g 72 -5.6 -4.56775 | ACGCGTGGGTAAAAA GTTCGC TGG GCGGAC GTTGGGCATTTATTA TERM 4043 3217671 - 3217659 - g 70 -4.7 -4.45664 | CGAACTTAACGAAAA CGGCG TTC CGGCG CGCGCAGCATGGATC ygjI 3216670 - 3218103 + | putative oxidoreductase TERM 4044 3218128 - 3218164 + F 76 -8.3 -4.04922 | opp_overlap 3218123, overlap 3218130 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAATAG TTTCTGCCTTTATAT TERM 4045 3218130 - 3218161 + F 75 -11.1 -3.05274 | gap 1, opp_overlap 3218123, overlap 3218128 AAAAATGAGCAGGCA TTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAA TAGTTTCTGCCTTTA TERM 4046 3219916 - 3219893 - g 78 -8.2 -4.15833 | gap 1 ACTATCAGCGCAAAA TCAGCGCCACC CGT GATGGC-CTGA AAGTCACCTTTGGCA ygjK 3219325 - 3221676 + | glycosyl hydrolase ygjL 3221902 - 3223920 + | putative NADPH dehydrogenase ygjM 3224381 - 3223965 - | hypothetical protein ygjN 3224692 - 3224378 - | hypothetical protein TERM 4047 3224729 - 3224759 + r 71 -6.8 -4.17296 | opp_overlap 3224731, overlap 3224730 3224733 AATTGGCAATATGAT AACATCCGTTGACA GAT TGGCAACGGATGAA TTTATCTGTGTGACG TERM 4048 3224730 - 3224758 + r 73 -10.3 -3.09896 | opp_overlap 3224731, overlap 3224729 3224733 ATTGGCAATATGATA ACATCCGTTGACA GAT TGGCAACGGATGA ATTTATCTGTGTGAC TERM 4049 3224757 - 3224731 - R 93 -13.8 -3.52073 | opp_overlap 3224730 3224729 3224733 TTGGCAATATGATAA CATCCGTTGACA GAT TGGCAACGGATG AATTTATCTGTGTGA TERM 4050 3224733 - 3224755 + r 71 -10.6 -2.75389 | opp_overlap 3224731, overlap 3224730 3224729 GGCAATATGATAACA TCCGTTGACA GAT TGGCAACGGA TGAATTTATCTGTGT TERM 4051 3224895 - 3224944 + r 75 -10 -3.53811 | opp_overlap 3224873 3224871 3224931 3224941, overlap 3224884 ATGCGACGCTTGCCG CGTCTTATCCGGCCTGGGGGTA ACGTGC TGAACGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 4052 3224962 - 3224931 - R 78 -12.2 -2.52795 | opp_overlap 3224895, overlap 3224941 AACGTGCTGAACGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA GGTAACTCCCAATCT ygjO 3226113 - 3224977 - | putative enzyme TERM 4053 3225626 - 3225642 + g 74 -6.5 -4.58283 | CATGCCAGCGTGGTG GTGGTCG GGC CGAGCAC TTTTTCGAACAGTTC ygjP 3226162 - 3226701 + | hypothetical protein ygjQ 3226778 - 3227470 + | hypothetical protein TERM 4054 3228320 - 3228302 - g 70 -3.8 -4.65895 | opp_overlap 3228302 3228314 CTGGTGATTGAAAAA CTGTCTGA ATG CCAGAAAG TCTGCTTTGTGCCGC ygjR 3227531 - 3228547 + | hypothetical protein TERM 4055 3228712 - 3228693 - f 83 -10.8 -3.66178 | opp_overlap 3228693 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4056 3228693 - 3228712 + F 100 -10.8 -5.56673 | opp_overlap 3228693 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4057 3228768 - 3228793 + F 100 -13.3 -5.76633 | opp_overlap 3228768 3228767 3228765 ATGCATAAAAAGCAG CGGCTGACGTC TTCC GACGTTGGCCG TTTTTTTATGTGTAA ygjT 3228818 - 3229780 + | putative transport protein TERM 4058 3230225 - 3230208 - f 75 -6.3 -4.44046 | TTTATGTTAAATAAA TGCAACC ATTA AGTTGCA AAACATGACCTCTCT ygjU 3230378 - 3231622 + | serine/threonine transporter SstT TERM 4059 3231631 - 3231655 + T 100 -12.1 -4.6468 | TAATTAATTGTTTAA CCCCTTTCGTC TAT GGCGGGAGGGG TTTTCTCTACTTTAA ygjV 3232178 - 3231627 - | hypothetical protein TERM 4060 3232234 - 3232210 - R 95 -12.9 -4.21922 | opp_overlap 3232210 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC TERM 4061 3232210 - 3232234 + r 100 -10 -5.4505 | opp_overlap 3232210 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC uxaA 3233748 - 3232261 - | altronate hydrolase TERM 4062 3232437 - 3232463 + g 77 -8.7 -4.11216 | TCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA uxaC 3235175 - 3233763 - | glucuronate isomerase TERM 4063 3233982 - 3233961 - G 72 -7.9 -3.95787 | opp_overlap 3233962 3233974, overlap 3233974 CAGCATACCGACAAA GCGGCTCAG CAGA CCGAGCTGC GCCAGTTGGGTCATC TERM 4064 3236518 - 3236538 + G 72 -8.9 -3.83502 | overlap 3236504 3236522 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTGAACCTG TERM 4065 3236522 - 3236534 + G 73 -9.1 -3.59402 | overlap 3236504 3236518 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTGAA exuT 3235660 - 3236958 + | transport protein of hexuronates TERM 4066 3236999 - 3237009 + T 71 -6.8 -4.03234 | opp_overlap 3236998 AGCCACCTTATAACC CGAC TTC GTCG TTTATATAGAAAAAA SF3134 3237678 - 3237046 - | hypothetical protein insA 3237825 - 3238100 + | IS1 ORF1 insB 3238127 - 3238522 + | IS1 ORF2 exuR 3238630 - 3239406 + | DNA-binding transcriptional repressor ExuR TERM 4067 3239420 - 3239439 + F 87 -10.7 -4.0942 | opp_overlap 3239410 GAAATTCCTGTCCGA CAGGCGC TGCAAT GCGCCTG TTTGTCTCGTCGGTA TERM 4068 3239697 - 3239681 - f 70 -5.1 -4.44819 | opp_overlap 3239693, overlap 3239683 CAGAACATACCAAAA CAGCAAT AAC ATTGCGG TAGTGCATCTTTTAA yqjA 3239751 - 3240413 + | hypothetical protein yqjB 3240432 - 3240800 + | hypothetical protein TERM 4069 3240863 - 3240890 + F 79 -10.6 -3.48924 | opp_overlap 3240863 3240864 3240866, overlap 3240864 3240867 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG TERM 4070 3240864 - 3240889 + F 76 -11.9 -2.6914 | opp_overlap 3240864 3240863 3240866, overlap 3240863 3240867 CTGTCTATGATTAAT GAGGCGGTGGT TAAC ACTACCGCTTC GTTGTCTGGACAATC TERM 4071 3240867 - 3240886 + F 75 -10 -3.49618 | opp_overlap 3240866 3240864 3240863, overlap 3240864 3240863 TCTATGATTAATGAG GCGGTGGT TAAC ACTACCGC TTCGTTGTCTGGACA yqjD 3241339 - 3241644 + | hypothetical protein yqjE 3241647 - 3242051 + | hypothetical protein TERM 4072 3242091 - 3242113 + G 71 -9.2 -3.54741 | opp_overlap 3242104 3242105 GCAACTGCTTAGCCA GATCCAGC AACAACG GCTGGATC TTTCCGCCAGTAGTC SF3143 3242041 - 3242340 + | hypothetical protein TERM 4073 3242350 - 3242368 + F 85 -12.4 -3.37071 | GGTTAACTTCCCTCT GGCCGGAG CAA TTCCGGCC TTATCCATCAAATTT TERM 4074 3242508 - 3242491 - g 100 -4.1 -5.60993 | overlap 3242494 3242497 CCTTGCACAAAAAAA CAATCAG CAGC CTGAGTG GCGCAGTGGAGAGTA TERM 4075 3242505 - 3242494 - g 79 -4.4 -4.89054 | overlap 3242491 3242497 TGCACAAAAAAACAA TCAG CAGC CTGA GTGGCGCAGTGGAGA TERM 4076 3242665 - 3242678 + G 87 -4.5 -5.27335 | GTGTCCCGGGTTTTA TGCTG CTGA CGGCA TTTTTATTTCACAGC SF3144 3242436 - 3242822 + | hypothetical protein TERM 4077 3242867 - 3242850 - f 100 -11.3 -5.37345 | opp_overlap 3242850 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG TERM 4078 3242850 - 3242867 + F 100 -11.3 -4.87626 | opp_overlap 3242850 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG yqjG 3242892 - 3243878 + | putative transferase TERM 4079 3243884 - 3243901 + F 74 -11.3 -2.8664 | opp_overlap 3243884 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA TERM 4080 3243901 - 3243884 - f 100 -11.3 -5.40072 | opp_overlap 3243884 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA yhaH 3244171 - 3244539 + | putative cytochrome TERM 4081 3244564 - 3244547 - T 73 -9.9 -3.34845 | opp_overlap 3244543 3244542 3244550 AAGAATAATGATTAA GCACCTT GTAA AAGGTGC TTCAAATTGTTGACA TERM 4082 3244720 - 3244737 + T 71 -9.9 -3.26842 | opp_overlap 3244720 TGTCAGCAGTCAGAA GCACCTT GTGA AAGGTGC TTAATAGATTATTTT TERM 4083 3244737 - 3244720 - T 73 -9.9 -3.37796 | opp_overlap 3244720 TGTCAGCAGTCAGAA GCACCTT GTGA AAGGTGC TTAATAGATTATTTT yhaJ 3245642 - 3244746 - | putative LYSR-type transcriptional regulator yhaK 3245747 - 3246448 + | hypothetical protein yhaL 3246471 - 3246635 + | hypothetical protein TERM 4084 3246754 - 3246708 - T 72 -8.7 -3.69681 | gap 1, overlap 3246706 3246709 TCAACAAATTAAACA CCCCGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCAT-CAGGT ACAAAACACAACAAC TERM 4085 3246753 - 3246709 - T 79 -12.2 -2.80724 | gap 1, overlap 3246708 3246706 CAACAAATTAAACAC CCCGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCAT-CAGG TACAAAACACAACAA yhaM 3247413 - 3246847 - | hypothetical protein TERM 4086 3247563 - 3247552 - R 74 -7.2 -4.35604 | GGAATCGAGAATAAA GCGG ATCG CCGC AAATGGGACTTCATT yhaO 3249516 - 3248185 - | putative transport system permease protein TERM 4087 3249766 - 3249749 - R 100 -11.3 -6.00086 | AGATCACAAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG TERM 4088 3249795 - 3249778 - R 80 -9.9 -3.84961 | overlap 3249790 CACCCAAGGATGAAA GCTGACA GCAA TGTCAGC CGCAGACCACTTTAA SF3152 3251155 - 3249791 - | putative L-serine deaminase TERM 4089 3251220 - 3251186 - R 75 -11.5 -3.05384 | gap 1, opp_overlap 3251199 3251200, overlap 3251200 TTGCCGTTCAGTGAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCTTTACGCACT yhaR 3251616 - 3251227 - | hypothetical protein tdcE 3253924 - 3251630 - | formate acetyltransferase 3 TERM 4090 3252120 - 3252142 + g 70 -5.5 -4.33854 | GACTGGGTAGGGACG GCGTTGCGA TAGGT TGGCAGCGC TTTAATTTTCTTCAT TERM 4091 3252515 - 3252525 + g 70 -6.8 -4.07687 | overlap 3252512 CAGCACGTCGTCCAT CAGC GGT GCTG TTTTCGGCCCGACCT TERM 4092 3253520 - 3253551 + g 81 -8.8 -4.35461 | gap 1 ATATTCAAATTCACT GTCCATTTCACGGCC ATA GGC-GTGGAATGAAC TTTTAATCATATTAA tdcD 3255178 - 3253958 - | propionate/acetate kinase TERM 4093 3254992 - 3255022 + g 70 -11 -2.74144 | overlap 3254992 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA TERM 4094 3254992 - 3255023 + g 73 -9.4 -3.57263 | gap 1, overlap 3254992 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT tdcC 3256523 - 3255192 - | threonine/serine transporter TdcC tdcB 3257534 - 3256545 - | threonine dehydratase TERM 4095 3256597 - 3256618 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA tdcA 3258571 - 3257633 - | DNA-binding transcriptional activator TdcA tdcR 3258761 - 3259105 + | DNA-binding transcriptional activator TdcR TERM 4096 3259877 - 3259891 + T 75 -2.9 -5.23396 | CTTTTTTTCACCCGA TCATT TTAAT AATGA TTTTTATTGATTATT TERM 4097 3261241 - 3261215 - T 72 -5 -4.66833 | overlap 3261216 TGGCAACCGCAAAAA TGCCTGATGCGC TAC GCTTATCAGGCC TACGCCATCTCTGCA TERM 4098 3261476 - 3261449 - T 100 -15 -4.07568 | opp_overlap 3261456, overlap 3261456 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTATATCAGGTGAAA TERM 4099 3261469 - 3261456 - T 100 -9.5 -5.0925 | opp_overlap 3261456, overlap 3261449 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTATATCA TERM 4100 3261456 - 3261469 + T 93 -9.5 -4.72846 | opp_overlap 3261449 3261456 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTATATCA TERM 4101 3261589 - 3261562 - T 100 -15 -4.07568 | opp_overlap 3261569, overlap 3261569 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTACATCAGGTGAAA TERM 4102 3261569 - 3261582 + T 93 -9.5 -4.67353 | opp_overlap 3261562 3261569 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTACATCA TERM 4103 3261582 - 3261569 - T 100 -9.5 -5.0925 | opp_overlap 3261569, overlap 3261562 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTACATCA TERM 4104 3261702 - 3261675 - T 100 -15 -4.07568 | opp_overlap 3261682, overlap 3261682 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAAACAGGTGAAA TERM 4105 3261682 - 3261695 + T 93 -9.5 -4.65895 | opp_overlap 3261675 3261682 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAAACA TERM 4106 3261695 - 3261682 - T 100 -9.5 -5.0925 | opp_overlap 3261682, overlap 3261675 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAAACA yhaD 3263264 - 3262119 - | glycerate kinase I TERM 4107 3263287 - 3263298 + r 74 -7.2 -4.34263 | opp_overlap 3263287 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 3264251 - 3263361 - | tartronate semialdehyde reductase TERM 4108 3263921 - 3263935 + g 77 -10 -3.57561 | overlap 3263915 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA TERM 4109 3264178 - 3264192 + g 73 -4.2 -4.81685 | opp_overlap 3264178 ACCACCAGCGAGTAA CCTGCT TTC AGAAGG TTTTTACTCATTGGT yhaU 3266401 - 3265067 - | putative transport protein TERM 4110 3265701 - 3265715 + g 86 -7 -4.9218 | TTGGGACCGCTTGCT GCCGCG CTG CCCGGC TTTTTGTGGTCCATA TERM 4111 3267632 - 3267654 + G 72 -6.2 -4.4009 | overlap 3267633 AACTGGTTGTCGGCA TGCATTGCGG TGG CAGCGATGCG TTTTCTGGCGTAACG yhaG 3266776 - 3268347 + | putative hydrolase TERM 4112 3268363 - 3268393 + T 73 -10.6 -3.05384 | overlap 3268365 TAATTCAATTCGTAT TATGCCCGATAG CACACGT TTATCGGGCATA TTGAGTCACAGCGAA agaR 3269223 - 3268399 - | DNA-binding transcriptional regulator AgaR TERM 4113 3269778 - 3269756 - g 74 -9.8 -3.53444 | overlap 3269769 CCATCTGGGGCCAAA CCGCTGGCAA AAC CTGCCAGCCG CTCAGGCAATGGCCA agaZ 3269472 - 3270752 + | putative tagatose 6-phosphate kinase 2 agaV 3270739 - 3271248 + | N-acetylgalactosamine-specific PTS system transporter subunit IIB agaW 3271259 - 3272038 + | N-acetylgalactosameine-specific IIC component 2 agaE 3272028 - 3272837 + | putative transport enzyme subunit agaF 3272924 - 3273358 + | putative transport enzyme subunit TERM 4114 3273770 - 3273757 - g 70 -5.2 -4.30987 | ACGCCGCAGAATAAA GGCG CGCATC CGCC GGGTAATGCTGCCAA agaA 3273355 - 3273798 + | N-acetylglucosamine-6-phosphate deacetylase insA 3273827 - 3274102 + | IS1 ORF1 insB 3274129 - 3274524 + | IS1 ORF2 TERM 4115 3274849 - 3274859 + G 81 -6.8 -4.63592 | TGGGGATTGATTTTT GGCT GGA AGCC TTATTTTTATTCCGC agaC 3274779 - 3275582 + | N-acetylgalactosamine-specific PTS system transporter subunit IIC agaD 3275572 - 3276363 + | N-acetylgalactosamine-specific PTS system transporter subunit IID TERM 4116 3276371 - 3276395 + G 100 -14.3 -3.90856 | opp_overlap 3276370 3276366 3276365 3276373 TTTTGTAAATGGAAC GAGGCACTGCT TCT GGCGGTGCCTC TTTACTTAAGGAATT TERM 4117 3276590 - 3276572 - g 82 -3 -5.24531 | opp_overlap 3276576 ATCTGGTAGAAAAAA TCCACCAG CAG CAGGTTGA TATCAGCCAGCTCAC TERM 4118 3276947 - 3276923 - g 95 -9.9 -4.65168 | overlap 3276924 ATGAGATGTTAAAAA CCACGGGTCGC CCC GTGACTCGTGG GATCACCTTAGGCCT TERM 4119 3276939 - 3276924 - g 72 -10.4 -3.38378 | overlap 3276923 TGAGATGTTAAAAAC CACGGG TCGC CCCGTG ACTCGTGGGATCACC agaI 3276364 - 3277119 + | galactosamine-6-phosphate isomerase insB 3278023 - 3277628 - | IS1 ORF2 insA 3278325 - 3278050 - | IS1 ORF1 TERM 4120 3278889 - 3278918 + H 100 -13.7 -4.50241 | overlap 3278890 ACCGTTAATACGTTA CGGCGTTATCTGA CCTT TCAGATAACGCCC TTTTCCTTCCTCTTT TERM 4121 3278890 - 3278917 + H 100 -17.2 -3.28518 | overlap 3278889 CCGTTAATACGTTAC GGCGTTATCTGA CCTT TCAGATAACGCC CTTTTCCTTCCTCTT TERM 4122 3279121 - 3279108 - g 72 -5.9 -4.41348 | opp_overlap 3279108 CCTGTCGCAAACAAA GGCGC AGAA ACGCC TTATTTACTGCAATC yraI 3278961 - 3279656 + | putative chaperone TERM 4123 3280814 - 3280790 - T 70 -9.2 -3.42605 | overlap 3280788 3280786 GGCATCTAAAATATA GCGCGACCGC TGGAC GCTATCGCGC TGATGCAAACAGTGA SF3183 3281843 - 3281421 - | IS2 ORF2 SF3184 3281850 - 3282281 + | putative IS2 ORF SF3185 3282649 - 3282284 - | insertion sequence 2 OrfA protein TERM 4124 3283972 - 3283951 - g 77 -3 -5.07275 | TCACACAGATAAAAA GCAGCA CCGTATATTC TGCTGC AACCCAAACGGGTGT TERM 4125 3284423 - 3284411 - g 71 -9.1 -3.46117 | overlap 3284402 AGTAGACCAGTACAA CCTGG TCG CCAGG CGAAGAAGTTCAGAC yraK 3283548 - 3284639 + | putative fimbrial protein TERM 4126 3284674 - 3284642 - T 89 -11.5 -4.07885 | gap 1, overlap 3284645 CATGGTGCGGTAAAA GAAGACGTTGCGTT TTGATT AACGCAACG-CTTC GGCACTGTTACCCCT TERM 4127 3284671 - 3284645 - T 73 -7.4 -4.17048 | gap 1, overlap 3284642 GGTGCGGTAAAAGAA GACGTTGCGTT TTGATT AACGCAACG-C TTCGGCACTGTTACC yraL 3285542 - 3284682 - | hypothetical protein TERM 4128 3284743 - 3284759 + g 83 -6.5 -5.00616 | overlap 3284741 3284753 ACGCCATGAATTTCT GCGGC CAGCGCC GCCGC TTTTTTCAGCGGCAG TERM 4129 3285602 - 3285591 - H 86 -3 -5.75945 | ATTGCGTAAAAAAAA TATC ACTG GATA CATTATGGTACCCTC TERM 4130 3285738 - 3285750 + GH 72 -4.7 -4.66537 | overlap 3285731 3285735 GCAGGGCACGGCGCA GGCTG ATT CTGCC TTTTATCTTCAGCAG TERM 4131 3286023 - 3286005 - gH 78 -5.3 -4.79352 | opp_overlap 3286012 3286015, overlap 3285985 3285983 3285981 3285980 CGATTTAGAACAAAA CCAGCAA GCGCG TTACTGG CAGGCAAAAATCGAT yraM 3285607 - 3287643 + | putative glycosylase yraN 3287601 - 3287996 + | hypothetical protein yraO 3288016 - 3288606 + | DnaA initiator-associating protein DiaA yraP 3288616 - 3289191 + | hypothetical protein TERM 4132 3289257 - 3289292 + T 76 -8.2 -4.1899 | opp_overlap 3289269, overlap 3289226 3289259 3289260 CAACGATGCAAACCG TAGGTCGGATAAGGCG TTTA CGCCGCATCCGACATG TTTTCCCTCAAATCA TERM 4133 3289259 - 3289290 + T 72 -8.6 -3.69483 | opp_overlap 3289269, overlap 3289226 3289257 3289260 ACGATGCAAACCGTA GGTCGGATAAGGCG TTTA CGCCGCATCCGACA TGTTTTCCCTCAAAT TERM 4134 3289260 - 3289289 + T 77 -12.1 -2.81208 | opp_overlap 3289269, overlap 3289226 3289259 3289257 CGATGCAAACCGTAG GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATGTTTTCCCTCAAA yraQ 3290345 - 3289305 - | hypothetical protein yraR 3291098 - 3290418 - | hypothetical protein yhbO 3291139 - 3291699 + | hypothetical protein yhbP 3292122 - 3291679 - | hypothetical protein TERM 4135 3291960 - 3291970 + g 74 -8.2 -3.87914 | overlap 3291961 GCGGCCCACTCATCT GCGC GTG GCGC GTTTTTTCTTCCGTC TERM 4136 3291961 - 3291971 + g 100 -8.2 -5.4833 | overlap 3291960 CGGCCCACTCATCTG CGCG TGG CGCG TTTTTTCTTCCGTCA yhbQ 3292173 - 3292475 + | GIY-YIG nuclease superfamily protein yhbS 3292965 - 3292462 - | hypothetical protein yhbT 3293483 - 3292959 - | hypothetical protein TERM 4137 3294098 - 3294120 + G 71 -9 -3.43676 | overlap 3294100 GCCATTTTGACGTTG CCCGCGTGGT GCT GCCGCGCGTG TTGTCGATTCATCAG TERM 4138 3294100 - 3294118 + G 72 -10.2 -3.28814 | overlap 3294098 CATTTTGACGTTGCC CGCGTGGT GCT GCCGCGCG TGTTGTCGATTCATC yhbU 3293692 - 3294687 + | putative collagenase yhbV 3294696 - 3295574 + | hypothetical protein yhbW 3295655 - 3296662 + | hypothetical protein mtr 3298024 - 3296780 - | tryptophan permease TERM 4139 3297130 - 3297114 - G 70 -4.3 -4.48902 | AGATAGTCAAACAAA CCCAGCG TTA CGCCAAG GAACGAACTCGCTAC TERM 4140 3297564 - 3297583 + g 76 -9.3 -3.78775 | opp_overlap 3297562 3297563 GCCCCCAGCACAATC GCCGTCA TGCGGC TGACGGC TTTAGTACTCAACCA TERM 4141 3297650 - 3297633 - G 70 -4 -4.67641 | opp_overlap 3297638 AGTGCAAAACCAAAA CCCGCC GCCCGT GCCGGG ACGTTTAGCGACATC TERM 4142 3297921 - 3297905 - G 74 -2.9 -4.9218 | overlap 3297906 CATTGACCAGAAAAA CCACGCC CCG GACATGA CCACTGGCAGAGAAA TERM 4143 3297997 - 3297970 - G 76 -10.6 -3.28712 | gap 1, opp_overlap 3297969 3297989 TGGTGCCGCCGATAA TCACCA-CGCCGC CAA GCAGCGACGGTGA CGTTTGGGTGGTGGT TERM 4144 3298112 - 3298134 + r 74 -10.6 -3.17888 | opp_overlap 3298112, overlap 3298110 3298108 3298106 AAAGACAGAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT TERM 4145 3298134 - 3298112 - R 100 -10.6 -5.82281 | opp_overlap 3298112 3298110 3298108 3298106 AAAGACAGAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT deaD 3300067 - 3298178 - | ATP-dependent RNA helicase DeaD TERM 4146 3300212 - 3300187 - R 73 -7.5 -4.04023 | overlap 3300188 ATTAACGAACAACAA CGCCCTCACCC GTTA AGGTGATGGCA ATCAAAAAAGATTAC yhbM 3301131 - 3300247 - | lipoprotein NlpI TERM 4147 3301228 - 3301207 - R 100 -15.1 -4.07568 | CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC pnp 3303444 - 3301240 - | polynucleotide phosphorylase/polyadenylase TERM 4148 3303583 - 3303601 + r 77 -7.3 -4.38712 | opp_overlap 3303584, overlap 3303584 CGTCAGCTTGAAAAA AGGGGCC ACTCA GGCCCCC TTTTCTGAAACTCGC TERM 4149 3303600 - 3303584 - R 100 -10.8 -5.03314 | opp_overlap 3303583 3303584 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG TERM 4150 3303584 - 3303600 + r 74 -10.8 -3.22906 | opp_overlap 3303584, overlap 3303583 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG rpsO 3303891 - 3303622 - | 30S ribosomal protein S15 TERM 4151 3303726 - 3303747 + g 85 -2.9 -5.34555 | opp_overlap 3303728, overlap 3303728 3303729 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC truB 3304984 - 3304040 - | tRNA pseudouridine synthase B rbfA 3305385 - 3304984 - | ribosome-binding factor A TERM 4152 3305323 - 3305334 + g 75 -4.4 -4.82855 | overlap 3305315 TTCACGCTGCAGGAT GAGA GCGA TCTC TTTTTGCATTTCCTG TERM 4153 3305422 - 3305408 - R 100 -11.4 -5.24129 | opp_overlap 3305408 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4154 3305408 - 3305422 + r 95 -11.4 -4.68506 | opp_overlap 3305408 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4155 3305536 - 3305497 - R 93 -15 -3.11634 | opp_overlap 3305475 3305511, overlap 3305475 3305474 CGTCACATCAGGCAA TCCATGCCGGATGCGGCG TAAA CGCCTTATCCCGCATGGA ACCCTAAAAACCTTA infB 3308197 - 3305549 - | translation initiation factor IF-2 nusA 3309709 - 3308222 - | transcription elongation factor NusA TERM 4156 3308363 - 3308353 - G 74 -8.2 -3.89346 | opp_overlap 3308358, overlap 3308354 CTTCCAGCGTACAAA CGCC ACG GGCG GCCAGTTTGAATGCC TERM 4157 3308456 - 3308474 + g 82 -7.4 -4.57569 | TTCTTCCTGGGCCTG TGCAATGG TGG CCAGTGCA TTTTTAGCACGCTCG yhbC 3310189 - 3309737 - | hypothetical protein TERM 4158 3310226 - 3310214 - H 93 -6.9 -5.80248 | opp_overlap 3310213 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4159 3310254 - 3310271 + H 71 -6.9 -4.0641 | opp_overlap 3310255, overlap 3310255 GTCAGATAACAAAAA ACCCCGA TAAA TCGGGGC TTTATATAACTGAAC TERM 4160 3310270 - 3310255 - H 100 -10.4 -5.60689 | opp_overlap 3310255 3310254 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 4161 3310255 - 3310270 + H 73 -10.4 -3.03525 | opp_overlap 3310255, overlap 3310254 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA argG 3310820 - 3312163 + | argininosuccinate synthase TERM 4162 3314249 - 3314218 - T 100 -14.6 -4.32436 | opp_overlap 3314224, overlap 3314219 3314224 AGACCAGGACCAAAA CGAAAAGAGACGCT TTTC AGCGTCTCTTTTCT GGAATTTGGTACCGA TERM 4163 3314248 - 3314219 - T 100 -18.1 -3.18738 | opp_overlap 3314224, overlap 3314218 3314224 GACCAGGACCAAAAC GAAAAGAGACGCT TTTC AGCGTCTCTTTTC TGGAATTTGGTACCG TERM 4164 3314224 - 3314243 + T 100 -12.2 -4.44974 | opp_overlap 3314219 3314218 3314224 GGACCAAAACGAAAA GAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 4165 3314243 - 3314224 - T 100 -12.2 -4.70319 | opp_overlap 3314224, overlap 3314219 3314218 GGACCAAAACGAAAA GAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 4166 3314381 - 3314403 + T 76 -7.7 -4.32607 | GATATCGCTGGTCGG CTTAGCCGG AGCAG CTGGCTGAG TTTGTTCGGTTTTCG secG 3314689 - 3314357 - | preprotein translocase subunit SecG TERM 4167 3314889 - 3314877 - R 77 -3.3 -5.24129 | opp_overlap 3314878, overlap 3314878 3314879 TTCGCCGAGAAAAAA TGCGA CAA TCGCC GCCTTTTTAGCCAGT glmM 3316253 - 3314916 - | phosphoglucosamine mutase folP 3317094 - 3316246 - | dihydropteroate synthase TERM 4168 3316700 - 3316689 - G 70 -7.2 -4.0942 | opp_overlap 3316689 TATGCATCAGACAAA CCGG TAAA CCGG TTTCTGCAGCCGCCT TERM 4169 3317129 - 3317148 + r 87 -10.6 -4.18494 | opp_overlap 3317129 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA TERM 4170 3317148 - 3317129 - R 100 -12.8 -5.56673 | opp_overlap 3317129 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA hflB 3319118 - 3317184 - | ATP-dependent metalloprotease TERM 4171 3318191 - 3318170 - G 74 -10.1 -3.42574 | overlap 3318184 GCAAGCCGACCACAA CCTGGCGGT CGAA ACGGCCAGG ACGCAGCAGGGCCGG rrmJ 3319847 - 3319218 - | 23S rRNA methyltransferase J TERM 4172 3319748 - 3319761 + g 76 -3.8 -4.99638 | opp_overlap 3319740 GTTTAAACCAGGCAC GGGA ACGTAA TCCC TTTTTCTGTGCCTGT TERM 4173 3320014 - 3319997 - g 90 -4.9 -5.34309 | gap 1, overlap 3320002 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG yhbY 3319973 - 3320266 + | RNA-binding protein YhbY TERM 4174 3320352 - 3320379 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3320359, overlap 3320359 CACGCTCTGTTCGTT GATAAAAGGCCGC AGA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4175 3320373 - 3320359 - T 95 -12.8 -4.36914 | opp_overlap 3320352 3320359 TGTTCGTTGATAAAA GGCCGC AGA GCGGCC TTTTTCCTTTCTTTA TERM 4176 3320359 - 3320373 + T 100 -12.8 -5.13137 | opp_overlap 3320359, overlap 3320352 TGTTCGTTGATAAAA GGCCGC AGA GCGGCC TTTTTCCTTTCTTTA greA 3320898 - 3320422 - | transcription elongation factor GreA TERM 4177 3320460 - 3320471 + g 72 -7.2 -4.25104 | CTTCAAATTCTACTT CGCC GCCC GGCG TTTTGATGACCACAA TERM 4178 3321031 - 3321000 - H 89 -5.2 -5.68023 | gap 1, overlap 3321002 CCAGAAGCAAAAAAA TA-CCGACCCGGG TACAAGT CCCAGGTCAGCTA CAATTCACATTTTGA TERM 4179 3321028 - 3321002 - H 86 -9.4 -4.46828 | overlap 3321000 AGAAGCAAAAAAATA CCGACCCGGG TACAAGT CCCAGGTCAG CTACAATTCACATTT TERM 4180 3321954 - 3321938 - g 70 -5.8 -4.24326 | AAAGATGAGTTAAAA CAGGCG GGTAT CACCTG GAGCGGAACACTGCT dacB 3321146 - 3322579 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4181 3322613 - 3322587 - T 100 -18.1 -4.71382 | opp_overlap 3322591, overlap 3322591 ACAATTAGTCAAAAA GAAACCCCGGC GCATG GCCGGGGTTTC AGATTATTGACAAAG TERM 4182 3322609 - 3322591 - T 100 -13.1 -4.89063 | opp_overlap 3322591, overlap 3322587 TTAGTCAAAAAGAAA CCCCGGC GCATG GCCGGGG TTTCAGATTATTGAC TERM 4183 3322591 - 3322609 + T 95 -13.1 -3.72051 | opp_overlap 3322591 3322587 TTAGTCAAAAAGAAA CCCCGGC GCATG GCCGGGG TTTCAGATTATTGAC obgE 3323937 - 3322765 - | GTPase ObgE TERM 4184 3323115 - 3323131 + g 72 -7.9 -3.91506 | opp_overlap 3323106 3323105, overlap 3323113 3323117 ACCAACGCGGTTTCG CCGCCAG ATC CTGGCTG TATTTTTCCAGCTCG TERM 4185 3323117 - 3323129 + g 71 -9.1 -3.54256 | opp_overlap 3323106 3323105, overlap 3323115 3323113 CAACGCGGTTTCGCC GCCAG ATC CTGGC TGTATTTTTCCAGCT yhbE 3324918 - 3323953 - | hypothetical protein TERM 4186 3324185 - 3324148 - G 76 -9.1 -3.74198 | gap 1, overlap 3324141 AAAAAACAGCGTAAA CAGTG-GGGTGAGCGTGA TGA TCGCGCTCACCTGCGCTG CCTGCCAGCGAGCCA TERM 4187 3325016 - 3324995 - R 100 -15.9 -4.75174 | opp_overlap 3324995 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG TERM 4188 3324995 - 3325016 + r 100 -15.9 -3.794 | opp_overlap 3324995 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG rpmA 3325302 - 3325045 - | 50S ribosomal protein L27 rplU 3325634 - 3325323 - | 50S ribosomal protein L21 TERM 4189 3326431 - 3326403 - g 70 -5.1 -4.3586 | opp_overlap 3326421 TTATCTATAGCAAAA CCGCGCGTCTG TTTGAGG CTGCCGCGCAG TGTTCCGGGATTCTG TERM 4190 3326579 - 3326569 - g 81 -6.8 -4.67755 | ACAGTTAGGTAAAAA CGTC GGC GACG ATCTGAACGAAGGTA ispB 3325892 - 3326863 + | octaprenyl diphosphate synthase TERM 4191 3326877 - 3326895 + F 90 -16 -2.7386 | AATCCCCTCCCTTCA TCCCGCGC AGT GCGCGGGA TGATTCCAGTAAATT nlp 3327090 - 3327368 + | DNA-binding transcriptional regulator Nlp murA 3328675 - 3327416 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4192 3328173 - 3328195 + g 86 -10.6 -3.92075 | opp_overlap 3328171 GCAGCACACATGATG GTCACCGTTG CGC CAACGCTGAC TTTATCCATCACGAT yrbA 3328999 - 3328730 - | hypothetical protein TERM 4193 3328826 - 3328849 + g 76 -3.8 -5.00884 | CGCAATATATTCCAT CAGCGGGC CATAGACC GTCTGCTG TTTTTTAACCCGACT TERM 4194 3329084 - 3329060 - R 85 -7.2 -5.05712 | gap 1, overlap 3329079 ATAAATAAGCAAAAA GCCTCG-CTGA TAAA TCAGACAAGGC TCGACTTGCAGGCAG yrbB 3329533 - 3329144 - | hypothetical protein yrbC 3330072 - 3329437 - | hypothetical protein TERM 4195 3329595 - 3329608 + gr 70 -4.5 -4.57569 | overlap 3329596 CGTAAGCTTGCCAGT TTCCC GTCT GGGAG TTTTTACGCCACTGG vpsC 3330642 - 3330091 - | cytoplasmic membrane protein TERM 4196 3330596 - 3330577 - G 72 -5.6 -4.46112 | CTTCAGGCAAACAAA CAGCGCCG CCAG CAGTGCTG CTAATAAAAAGATAC vpsB 3331429 - 3330647 - | integral membrane protein vpsA 3332246 - 3331437 - | putative ABC transporter ATP-binding protein YrbF TERM 4197 3332945 - 3332968 + G 90 -7.4 -4.87665 | gap 1 CTTGCAGAGCTGCCG CGTGAC-GGCG GAT TGCCCGTCGCG TTTTTATGGCTCGGC TERM 4198 3333167 - 3333154 - g 72 -6.7 -4.24002 | TCGCAAAGGTGAAAA CGACA TTGC TGTCG GAAATATCATTGGCG TERM 4199 3333282 - 3333293 + G 70 -4.4 -4.47888 | ACTACAGCGTGATGT TGCT GGTG AGCA TTATTTTTGCGTTGC yrbG 3332456 - 3333421 + | putative calcium/sodium:proton antiporter TERM 4200 3334351 - 3334369 + G 84 -11 -3.79138 | ATATCACCTCCGTGA TGGTTGCC GAT GGCGACCA TTTACTCGGTGTGTT yrbH 3333435 - 3334421 + | D-arabinose 5-phosphate isomerase yrbI 3334442 - 3335008 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 4201 3335097 - 3335086 - gf 70 -3.6 -4.59511 | AATATGGCCGAAAAA GACG ATAC CGCC CAGGTGGTCGTCAAC yrbK 3335005 - 3335580 + | hypothetical protein TERM 4202 3336088 - 3336074 - gf 71 -3.4 -4.80417 | overlap 3336075 GACAAAAACAACAAA GGCCAG ACC CCGGCA CAGAAGAAGGGTAAT yhbN 3335549 - 3336106 + | hypothetical protein yhbG 3336113 - 3336838 + | putative ABC transporter ATP-binding protein YhbG rpoN 3336886 - 3338319 + | RNA polymerase factor sigma-54 yhbH 3338342 - 3338629 + | putative sigma(54) modulation protein TERM 4203 3338657 - 3338683 + F 95 -13 -3.93236 | overlap 3338658 TTAGCATGTGCATGG CGGCCTGTTGTG CGG CACAACGGGCCA TTTGTACGGTTAATG TERM 4204 3338658 - 3338682 + F 100 -16.5 -2.95459 | overlap 3338657 TAGCATGTGCATGGC GGCCTGTTGTG CGG CACAACGGGCC ATTTGTACGGTTAAT TERM 4205 3338882 - 3338894 + G 81 -6.9 -4.61231 | overlap 3338878 AAACAACTTAGCCTG CCGCC TCA GGTGG TTTTTGAAGCTATCC ptsN 3338747 - 3339238 + | sugar-specific enzyme IIA component of PTS TERM 4206 3339292 - 3339278 - f 74 -8.6 -3.96148 | CGTTGTGAGGAGAAA CAGTAC ATG GTACTG ATGATCGTCAGCGGA yhbJ 3339284 - 3340138 + | hypothetical protein TERM 4207 3340192 - 3340167 - g 88 -11.1 -4.13654 | overlap 3340170 TGTTGAAATCACAAA CAAGCTGGGCA TGCA TGCCCGGCCTG CAATGAAGCTGTTTG TERM 4208 3340189 - 3340170 - g 82 -9.2 -4.1851 | overlap 3340167 TGAAATCACAAACAA GCTGGGCA TGCA TGCCCGGC CTGCAATGAAGCTGT ptsO 3340135 - 3340407 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4209 3340395 - 3340416 + F 72 -10.3 -2.75963 | overlap 3340394 CTTTAATTCTGGTTT TGATGAAGA TTAA TCTTCATCA CTTTGACATACAACT yrbL 3340620 - 3341252 + | hypothetical protein yhbL 3342626 - 3341973 - | isoprenoid biosynthesis protein TERM 4210 3342836 - 3342858 + r 82 -5.4 -5.19261 | overlap 3342837 3342839 TGGCGCAGTATTCGC GCACCCCGGT CTA GCCGGGGTCA TTTTTTAGTGGCTTT TERM 4211 3342837 - 3342857 + r 76 -8.9 -3.6993 | overlap 3342836 3342839 GGCGCAGTATTCGCG CACCCCGGT CTA GCCGGGGTC ATTTTTTAGTGGCTT TERM 4212 3342839 - 3342855 + r 79 -11.5 -3.41701 | overlap 3342837 3342836 CGCAGTATTCGCGCA CCCCGGT CTA GCCGGGG TCATTTTTTAGTGGC arcB 3345192 - 3342856 - | aerobic respiration control sensor protein ArcB TERM 4213 3343253 - 3343269 + g 70 -6.5 -4.2704 | GTACTCTCCTCATCA TCCTGGG TAT CCCAGAA TTTCTTGATCATCGC TERM 4214 3344589 - 3344613 + g 74 -2.8 -4.92239 | CCGGTGAGTAAACAT CAGCAGGTTT CAGGT GAACCAGTTG TTTTTCGCTTTTTCC yhcC 3346217 - 3345288 - | hypothetical protein TERM 4215 3345661 - 3345634 - G 73 -11.3 -2.60615 | overlap 3345633 3345631 AGCGTTTGCAAACAT TCAGCCTGCCC TTCGCC AGGCAGGCCGA CAATTAAGTGGGAAC TERM 4216 3346516 - 3346532 + H 71 -7.3 -4.0371 | opp_overlap 3346518 AACACGCCTTTATGA CAGTCAG GAA TTGACTG TTTCTCTAACGACTC TERM 4217 3346695 - 3346713 + H 76 -11.8 -2.71918 | overlap 3346694 3346693 3346697 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 4218 3347464 - 3347482 + G 70 -4.5 -4.56961 | gap 1, overlap 3347468 TAAAGGTCTGTGTAT GC-CGGCG GATC TGCCGCGC TTTTATCTGGATCTT TERM 4219 3348069 - 3348056 - g 72 -5.2 -4.58283 | GAAGTGGTCGAAAAA GGCC GCGTCG GGCC AGGCGAACTGATGGT gltB 3346799 - 3351352 + | glutamate synthase subunit alpha TERM 4220 3352139 - 3352117 - g 74 -7.6 -4.07568 | overlap 3352123 CGGCGGGCTGGAAAA CGAAGACGCC GAT GGCGTGTACG CAGCGCTGCCGTTCC gltD 3351365 - 3352783 + | glutamate synthase subunit beta TERM 4221 3353293 - 3353271 - f 100 -16.4 -3.6106 | overlap 3353282 TTCAACATGTTGAAA TTCGCCAGAC AGT GTCTGGCGAA TTAACACCATTGGGA TERM 4222 3353344 - 3353298 - f 100 -16 -3.33696 | opp_overlap 3353341, overlap 3353282 3353300 TGTCTGGCGAATTAA CACCATTGGGAATTCCGCAGAC ACC ATCTGCAGAATTCCCATCGGCA AAGATTTGGCAGACG TERM 4223 3353342 - 3353300 - f 100 -18.6 -3.23853 | opp_overlap 3353341, overlap 3353282 3353298 TCTGGCGAATTAACA CCATTGGGAATTCCGCAGAC ACC ATCTGCAGAATTCCCATCGG CAAAGATTTGGCAGA TERM 4224 3353373 - 3353347 - f 88 -12.4 -3.57263 | opp_overlap 3353341, overlap 3353349 ATTCCCATCGGCAAA GATTTGGCAGAC GCT GTCTGCCAAATG AGAGGCTGTTTGATA TERM 4225 3353371 - 3353349 - f 100 -15 -3.36515 | opp_overlap 3353341, overlap 3353347 TCCCATCGGCAAAGA TTTGGCAGAC GCT GTCTGCCAAA TGAGAGGCTGTTTGA SF3255 3353520 - 3353822 + | IS600 ORF1 SF3256 3353858 - 3354676 + | IS600 ORF2 yhcH 3355574 - 3355110 - | hypothetical protein yhcI 3356446 - 3355571 - | N-acetylmannosamine kinase yhcJ 3357132 - 3356443 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 4226 3357172 - 3357153 - R 72 -10.7 -2.78679 | overlap 3357152 TTCCCTTAGCGAAAG GCCCGGT ACATAG ACCGGGC AACAGGATTAACTTT nanT 3358670 - 3357180 - | putative sialic acid transporter TERM 4227 3358683 - 3358704 + r 95 -12.3 -3.8377 | gap 1 CATTGTGAGTCTCCC GCG-GTGGGC GAT GCCCACACGC TTTGGTATGAAAATT TERM 4228 3358782 - 3358732 - R 74 -11.2 -2.89683 | opp_overlap 3358762 3358764 ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAACAACTCA CCCGCGCTCTTGCAT nanA 3359673 - 3358780 - | N-acetylneuraminate lyase yhcK 3360577 - 3359795 - | transcriptional regulator NanR insA 3361024 - 3361299 + | IS1 ORF1 insB 3361326 - 3361721 + | IS1 ORF2 SF3265 3362143 - 3361715 - | hypothetical protein insB 3362218 - 3362721 + | IS1 ORF2 TERM 4229 3363419 - 3363408 - g 82 -3 -5.24129 | GCTTTTGACAAAAAA GATA AAAA TATC AATCACGAACAGGCA TERM 4230 3364014 - 3364024 + G 78 -8.2 -4.15565 | ACGTCAGGAATTGCA GGCG TTT CGCC TTTTGCGGTGGTGAA yhcL 3362742 - 3364109 + | putative cryptic C4-dicarboxylate transporter DcuD TERM 4231 3364121 - 3364151 + T 85 -12.7 -3.33696 | opp_overlap 3364121 3364123 3364128, overlap 3364123 3364128 TTAAGTCATTAAAAA GACAAAACAGGCC GCCTG GGCCTGTTTTGTA TTACTTCACAACGCG TERM 4232 3364151 - 3364121 - T 100 -12.7 -4.77157 | opp_overlap 3364121 3364123 3364128, overlap 3364123 3364128 TTAAGTCATTAAAAA GACAAAACAGGCC GCCTG GGCCTGTTTTGTA TTACTTCACAACGCG TERM 4233 3364123 - 3364149 + T 100 -15.3 -3.23853 | opp_overlap 3364123 3364121 3364128, overlap 3364121 3364128 AAGTCATTAAAAAGA CAAAACAGGCC GCCTG GGCCTGTTTTG TATTACTTCACAACG TERM 4234 3364149 - 3364123 - T 100 -15.3 -3.9993 | opp_overlap 3364121 3364123 3364128, overlap 3364121 3364128 AAGTCATTAAAAAGA CAAAACAGGCC GCCTG GGCCTGTTTTG TATTACTTCACAACG TERM 4235 3364144 - 3364128 - T 100 -9.4 -5.00027 | opp_overlap 3364123 3364121 3364128, overlap 3364123 3364121 ATTAAAAAGACAAAA CAGGCC GCCTG GGCCTG TTTTGTATTACTTCA TERM 4236 3364128 - 3364144 + T 93 -9.4 -4.73864 | opp_overlap 3364128 3364123 3364121, overlap 3364123 3364121 ATTAAAAAGACAAAA CAGGCC GCCTG GGCCTG TTTTGTATTACTTCA sspB 3364649 - 3364152 - | ClpXP protease specificity-enhancing factor sspA 3365293 - 3364655 - | stringent starvation protein A TERM 4237 3365636 - 3365649 + r 100 -9.5 -5.03145 | opp_overlap 3365636 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG TERM 4238 3365649 - 3365636 - R 100 -9.5 -5.64274 | opp_overlap 3365636 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG rpsI 3366080 - 3365688 - | 30S ribosomal protein S9 rplM 3366524 - 3366096 - | 50S ribosomal protein L13 TERM 4239 3366386 - 3366401 + g 70 -6.8 -4.05446 | CACCGGTATCTACGT GCGGAG TATA TTCCGC TTTGTGCTTACCGCG TERM 4240 3366702 - 3366720 + r 100 -8.8 -5.06735 | opp_overlap 3366700 GATTATAGAGAAGTC GGGGTCAA AGA TCGACCCC TTTTTGTGATTTGTG yhcM 3367870 - 3366743 - | hypothetical protein TERM 4241 3368325 - 3368302 - g 100 -11 -4.65168 | opp_overlap 3368302 AGCACATGGCAAAAA GCTCCAGCAG CCTG CTGCCGGAAC TGTCTGCTGAAGCAA yhcB 3368064 - 3368462 + | cytochrome d ubiquinol oxidase subunit III TERM 4242 3368473 - 3368491 + F 79 -12.4 -2.83517 | ACTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTCTCCCT SF3274 3368574 - 3369773 + | putative periplasmic serine protease Do, heat shock protein HtrA TERM 4243 3369973 - 3370002 + F 73 -10.7 -3.11192 | opp_overlap 3369973 CGTTAATGTCGTAAA CCGGGCATCAGGC TGAC GTGTGATGTCCGG TTAACTCGTGGTATG TERM 4244 3370820 - 3370793 - g 78 -10.6 -3.42124 | gap 1, opp_overlap 3370807, overlap 3370787 CAAAATTATGGATAA GCTGATC-CGCGA TGG TCGCGTGATCCGC GGCTACATTGGTATC degS 3370053 - 3371120 + | serine endoprotease TERM 4245 3371165 - 3371136 - T 79 -9.4 -4.09685 | opp_overlap 3371142, overlap 3371142 GTCGAGTGCTCAAAA CAAAAACCGGAG TCTGTG CTCCGGTTTTTT ATTATTCGCTAATCA TERM 4246 3371159 - 3371142 - T 100 -8.4 -5.45802 | opp_overlap 3371142, overlap 3371136 TGCTCAAAACAAAAA CCGGAG TCTGTG CTCCGG TTTTTTATTATTCGC TERM 4247 3371142 - 3371159 + T 100 -9.1 -5.64873 | opp_overlap 3371142 3371136 TGCTCAAAACAAAAA CCGGAGT CTGT GCTCCGG TTTTTTATTATTCGC mdh 3372120 - 3371182 - | malate dehydrogenase argR 3372555 - 3373025 + | arginine repressor TERM 4248 3373028 - 3373058 + F 73 -9.6 -3.30039 | overlap 3373027 3373052 CCAGGAGCTTTAATC TCTGCCCCGTCGCT TCT GGCGGCGGGGAAAA TGTTGCTTATCCCTC TERM 4249 3373176 - 3373166 - f 82 -3.2 -5.45726 | CATACGGTAAAAAAA GCAC ATT ATGC AAAATTCATTATCTA yhcN 3373339 - 3373653 + | hypothetical protein TERM 4250 3373681 - 3373697 + T 100 -9.3 -5.78622 | opp_overlap 3373679 TTGTCCGACGATATT GCCCCCG GTT CGTGGGC TTTTTTTTGCGCTAA yhcO 3373981 - 3373709 - | hypothetical protein TERM 4251 3374047 - 3374065 + r 95 -12.4 -4.29176 | opp_overlap 3374047 ATAGCCATGAAAAAA CCGACGCT TTT GGCGTCGG TTTTGACTTAACTAT TERM 4252 3374065 - 3374047 - R 100 -11.7 -5.17353 | opp_overlap 3374047 ATAGCCATGAAAAAA CCGACGC TTTTG GCGTCGG TTTTGACTTAACTAT yhcP 3376040 - 3374073 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 3376978 - 3376046 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4253 3376751 - 3376765 + g 76 -4.2 -5.0133 | CGGCTGGTCGATGGT GAACAG TAT CTGTCC TTTTTTCACCAGCTG yhcS 3377390 - 3378301 + | putative DNA-binding transcriptional regulator tldD 3379874 - 3378429 - | protease TldD TERM 4254 3379284 - 3379255 - G 74 -6.3 -4.50661 | gap 1, opp_overlap 3379271 AACTCATAACCAAAA CGACCGCCGCCGCC ACT GGC-ACCGCGTTCG CGTTTGCCATCTTCT TERM 4255 3379358 - 3379322 - G 81 -10.8 -3.65827 | gap 1 GAACGCTCACGGAAA GACGCACCAGCGGACGG ACAT CCG-CCGCTAGCGTGCC GTCGGTGGCCGCAAC yhdP 3382990 - 3380030 - | hypothetical protein TERM 4256 3380648 - 3380659 + g 74 -5.8 -4.54727 | opp_overlap 3380629 GGCGGCATCAATTTT CTGC CCAC GCAG TTTTCCTTTCAGCGA cafA 3385367 - 3383898 - | ribonuclease G maf 3385950 - 3385357 - | Maf-like protein mreD 3386447 - 3385959 - | rod shape-determining protein MreD mreC 3387550 - 3386447 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4257 3387227 - 3387256 + g 76 -7.7 -4.27117 | opp_overlap 3387229, overlap 3387235 ACGCAGCGGGGAACC CAGCAGCTCGCGC AGAC GCGCGTTCTCCTG TTTGTATTGTCCAAG TERM 4258 3387235 - 3387248 + g 73 -9.5 -3.59627 | opp_overlap 3387229, overlap 3387227 GGGAACCCAGCAGCT CGCGC AGAC GCGCG TTCTCCTGTTTGTAT TERM 4259 3387609 - 3387576 - R 77 -11.7 -2.78596 | opp_overlap 3387571, overlap 3387579 TATTCTCGTATCAGA CCAGGCAGGGTAAAC AGAC GCTTCCCCTGCCTGC ATCCGATTACTCTTC TERM 4260 3387606 - 3387579 - R 76 -12 -2.66316 | opp_overlap 3387571, overlap 3387576 TCTCGTATCAGACCA GGCAGGGTAAAC AGAC GCTTCCCCTGCC TGCATCCGATTACTC mreB 3388719 - 3387616 - | regulator of ftsI, penicillin binding protein 3 TERM 4261 3388411 - 3388428 + g 74 -8.3 -3.90291 | opp_overlap 3388411, overlap 3388413 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4262 3388428 - 3388411 - G 72 -8.3 -3.73647 | opp_overlap 3388411 3388413 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4263 3388413 - 3388426 + g 71 -9.5 -3.54146 | opp_overlap 3388411, overlap 3388411 CAGTCACGAAGAAGT CGGCG ATAA CGCCG TCTTTCATTGGGCGA yhdA 3390904 - 3388964 - | regulatory protein CsrD TERM 4264 3389682 - 3389665 - G 72 -8.3 -3.85698 | CCGGTTTTTGATAAA GGCGCGG GCCG CCGCGAC TGAGCATTTGCTCGA TERM 4265 3391765 - 3391817 + G 70 -5.7 -4.33819 | gap 3, overlap 3391758 ATTACGGCGGCTGCG TGGCG-GCCTGTGGTCTGGC-GGGTG GTTT TACTCTGCCA-ACCACGGTCATGCCA TTTATTCTGCGTAAT yhdH 3391056 - 3392030 + | putative dehydrogenase SF3292 3392316 - 3392435 + | hypothetical protein accB 3393008 - 3393478 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4266 3394440 - 3394422 - g 74 -8 -4.00756 | GACCTGATCAAAGAA CAGCTGCG TAT CGCTGCCG GTCAACCGCTGTCGA accC 3393489 - 3394838 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4267 3394858 - 3394874 + F 100 -13.7 -5.5112 | opp_overlap 3394858 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG TERM 4268 3394874 - 3394858 - f 100 -13.7 -4.19276 | opp_overlap 3394858 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG yhdT 3394947 - 3395189 + | hypothetical protein panF 3395179 - 3396630 + | sodium/panthothenate symporter TERM 4269 3396705 - 3396733 + G 77 -8.9 -4.11216 | opp_overlap 3396670 3396714, overlap 3396706 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 4270 3396706 - 3396732 + G 79 -12.4 -3.06515 | opp_overlap 3396670 3396714, overlap 3396705 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3396642 - 3397523 + | ribosomal protein L11 methyltransferase TERM 4271 3397617 - 3397577 - f 90 -9.9 -4.43189 | opp_overlap 3397575 AGCAAGCTCACAAAA GGCACGTAAATTTGC CGATTATTTAC GCAAATTTGCGTGCC AAAATTTTCATTCAT TERM 4272 3397657 - 3397642 - f 81 -3.3 -5.38958 | opp_overlap 3397642 3397651, overlap 3397653 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTTGAGTGTA TERM 4273 3397817 - 3397803 - f 76 -4.2 -5.00884 | overlap 3397804 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG yhdG 3397975 - 3398817 + | putative dehydrogenase fis 3398843 - 3399139 + | DNA-binding protein Fis TERM 4274 3399169 - 3399194 + F 100 -8.2 -5.29782 | opp_overlap 3399169 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4275 3399194 - 3399169 - f 74 -6 -4.7254 | opp_overlap 3399169 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4276 3400060 - 3400046 - g 88 -5.6 -5.21683 | AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCCGGTT yhdJ 3399225 - 3400109 + | putative methyltransferase yhdU 3400166 - 3400393 + | hypothetical protein insB 3400890 - 3400387 - | IS1 ORF2 SF3303 3400965 - 3401291 + | putative IS1 encoded protein TERM 4277 3401285 - 3401269 - f 87 -9.5 -4.27259 | opp_overlap 3401271, overlap 3401282 CACAGACAGGTAAAA GACGTTT CCC AAACGTC CTATAACGATAATTT yhdW 3401320 - 3402345 + | putative periplasmic binding transport protein TERM 4278 3402362 - 3402383 + F 85 -13.7 -3.07233 | opp_overlap 3402361 3402364, overlap 3402364 3402379 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC TERM 4279 3402364 - 3402381 + F 73 -10.5 -3.09135 | opp_overlap 3402364 3402361, overlap 3402362 3402379 GGTGTGAGGTAACGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT SF3305 3402395 - 3402886 + | putative transport system permease protein TERM 4280 3402920 - 3402944 + T 74 -7.1 -4.30933 | TCGTGGGCTTTATAT TCCGTCACC GCAGCTG GGAGACGGA TTTATTGCGTTTATG insB 3403369 - 3402974 - | IS1 ORF2 insA 3403671 - 3403396 - | IS1 ORF1 TERM 4281 3405388 - 3405400 + G 73 -4.1 -4.87803 | TGTTTTCGCCGCGCT GATCT ACT GGATC TTTTGTTTCAGCATG yhdY 3404369 - 3405472 + | putative transport system permease protein yhdZ 3405480 - 3406238 + | putative ATP-binding component of a transport system TERM 4282 3406284 - 3406265 - f 100 -13.6 -5.0925 | opp_overlap 3406254 3406265 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4283 3406265 - 3406284 + F 100 -13.6 -3.83214 | opp_overlap 3406265, overlap 3406254 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4284 3406676 - 3406697 + F 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4285 3409165 - 3409177 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4286 3409719 - 3409743 + F 71 -8 -3.93061 | gap 1, opp_overlap 3409725 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4287 3409945 - 3409958 + F 75 -6.7 -4.41177 | overlap 3409910 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 4288 3411735 - 3411747 + F 71 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4289 3411767 - 3411781 + F 79 -4.2 -5.1485 | opp_overlap 3411767, overlap 3411756 3411768 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTCGTTG yrdA 3411810 - 3412580 + | putative transferase yrdB 3412813 - 3412556 - | hypothetical protein aroE 3413628 - 3412810 - | shikimate 5-dehydrogenase yrdC 3414205 - 3413633 - | putative ribosome maturation factor yrdD 3414728 - 3414210 - | putative DNA topoisomerase TERM 4290 3414265 - 3414255 - G 70 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 4291 3414626 - 3414590 - G 89 -13.1 -3.34233 | overlap 3414593 3414619 CCAGAACTTTGACAA TATGTCCATCCGCTGAA GAT TTCAGAGGACGGACGTA GTCACACGCCGGATA TERM 4292 3414623 - 3414593 - G 89 -14.8 -2.53747 | overlap 3414590 3414619 GAACTTTGACAATAT GTCCATCCGCTGAA GAT TTCAGAGGACGGAC GTAGTCACACGCCGG smg 3415239 - 3414781 - | hypothetical protein TERM 4293 3415089 - 3415107 + g 74 -6 -4.57569 | TCGGTTCTGCCAACC CTTCCTGA TAA TCAGCAAG TTTTTCCAGCCATAG smf 3416350 - 3415226 - | hypothetical protein TERM 4294 3415809 - 3415795 - G 72 -10 -3.34715 | overlap 3415776 3415793 CACCCTGTTCAAACA GACTGG CAG CCAGTC GGGCATGGCGACGCG def 3416515 - 3417024 + | peptide deformylase TERM 4295 3417085 - 3417107 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 4296 3417187 - 3417177 - g 74 -3.2 -5.02074 | overlap 3417181 GGACGCGGTAAAAAA CTGA TGC CCAG CCCGATTAAAGTTCT TERM 4297 3417270 - 3417260 - g 85 -6.8 -4.77165 | overlap 3417261 GCGTCCACAAGAAAA CCAG CAA CTGG TCGCCGATTTGCAGG fmt 3417039 - 3417986 + | methionyl-tRNA formyltransferase TERM 4298 3418002 - 3418020 + F 70 -2.2 -5.01535 | overlap 3418003 TAGTCCACTCTTCTA AGCCCGGT CTT GCCGAGCA TTTTTATACTTATGA TERM 4299 3418057 - 3418041 - g 88 -5.1 -5.17353 | overlap 3418044 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCCCAGGC TERM 4300 3418054 - 3418044 - g 75 -5.4 -4.67552 | overlap 3418041 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCCCA TERM 4301 3418180 - 3418194 + G 77 -10 -3.60971 | opp_overlap 3418149 AAGAGTTGTGCTTTG GCGTAC TGC GTACGC TTTCGCAGTTAGACT TERM 4302 3419278 - 3419264 - g 73 -3.5 -4.87133 | opp_overlap 3419274 ACCGGGTAAACAAAA TCAGC CTGGT GCCGA AGAGGGCGACGGCTT sun 3418032 - 3419321 + | 16S rRNA methyltransferase B TERM 4303 3420044 - 3420033 - g 77 -5.8 -4.62783 | CAGCGACTGGAAAAA CCGT ATAA ACGG ATCATGCTGGTTGGT trkA 3419343 - 3420719 + | potassium transporter peripheral membrane component TERM 4304 3420721 - 3420748 + F 100 -15.8 -3.89938 | opp_overlap 3420724 3420727, overlap 3420724 3420727 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT TERM 4305 3420745 - 3420724 - f 86 -13.1 -3.33696 | opp_overlap 3420724 3420721 3420727, overlap 3420727 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4306 3420724 - 3420745 + F 95 -13.1 -4.05629 | opp_overlap 3420724 3420727, overlap 3420721 3420727 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4307 3420727 - 3420742 + F 87 -10.4 -4.13254 | opp_overlap 3420724 3420727, overlap 3420724 3420721 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4308 3420742 - 3420727 - f 83 -10.4 -3.81146 | opp_overlap 3420727 3420724 3420721, overlap 3420724 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4309 3420896 - 3420869 - f 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 4310 3421236 - 3421248 + G 73 -9.1 -3.62046 | opp_overlap 3421229 GCTAAGCAGGCATTA CAGCC TGG GGCTG TTGTTGCCCGGATCG SF3322 3420900 - 3421574 + | ISSfl4 ORF1 SF3323 3421571 - 3421918 + | ISSfl4 ORF2 TERM 4311 3422169 - 3422132 - g 70 -6.2 -4.1585 | overlap 3422133 3422137 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 4312 3422191 - 3422174 - g 82 -9.1 -4.19238 | overlap 3422187 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA SF3324 3421938 - 3423539 + | ISSfl4 ORF3 SF3325 3423830 - 3423543 - | ISSfl4 ORF1 TERM 4313 3423834 - 3423861 + r 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG TERM 4314 3423956 - 3423989 + r 90 -14.1 -3.37879 | opp_overlap 3423966, overlap 3423966 TGGGGATACTACGGG TATAAAAAAACCCGC CGGG GCGGGTTTTTTTACA TTGCTTCAGATTACT TERM 4315 3423979 - 3423966 - R 100 -9.5 -5.61596 | opp_overlap 3423966 3423956 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACATTGCT TERM 4316 3423966 - 3423979 + r 100 -9.5 -5.54192 | opp_overlap 3423966, overlap 3423956 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACATTGCT TERM 4317 3424010 - 3424020 + r 71 -6.8 -4.0371 | overlap 3423990 3423989 TCAGATTACTCTGCA GCAG CTT CTGC TTTCTCTGAACGATC rplQ 3424383 - 3424000 - | 50S ribosomal protein L17 rpoA 3425413 - 3424424 - | DNA-directed RNA polymerase subunit alpha TERM 4318 3424507 - 3424519 + g 74 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCAAGGTT TERM 4319 3425454 - 3425436 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3426047 - 3425439 - | 30S ribosomal protein S4 TERM 4320 3425549 - 3425559 + g 70 -6.8 -4.12188 | overlap 3425546 CAGCATCAACTTCCA GCCA AGT TGGC TTTTCACGCTGCTCA TERM 4321 3426086 - 3426104 + r 76 -4.4 -5.00616 | opp_overlap 3426077 3426086 AACAAACCTGGAAAA CGAGGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3426482 - 3426093 - | 30S ribosomal protein S11 TERM 4322 3426516 - 3426541 + r 70 -8.9 -3.39449 | overlap 3426517 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 4323 3426517 - 3426540 + r 71 -10.2 -2.63348 | overlap 3426516 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG rpsM 3426855 - 3426499 - | 30S ribosomal protein S13 TERM 4324 3426680 - 3426698 + g 77 -8.8 -4.05446 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTCCTTCAGACA TERM 4325 3426972 - 3426943 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 3427118 - 3427002 - | 50S ribosomal protein L36 secY 3428481 - 3427150 - | preprotein translocase subunit SecY TERM 4326 3427683 - 3427637 - G 73 -9.4 -3.56921 | opp_overlap 3427643 3427651, overlap 3427635 GGGAACAGAATAATA CTGGAAGCGAAGATTGCCGGGA TTA CCCCCGCCATATTCACTTTCAG CGGTAAATGTGTGCT TERM 4327 3428048 - 3428017 - G 74 -10.2 -3.51032 | opp_overlap 3428023, overlap 3428023 AGCGGTGAAGTAGAA TGCAAAGCCCGG GTTAATCA CCAGGCCTTGCA TACCAGGCATATTCG rplO 3428923 - 3428489 - | 50S ribosomal protein L15 TERM 4328 3428869 - 3428882 + g 75 -5.2 -4.59853 | opp_overlap 3428862, overlap 3428862 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3429106 - 3428927 - | 50S ribosomal protein L30 rpsE 3429613 - 3429110 - | 30S ribosomal protein S5 rplR 3429981 - 3429628 - | 50S ribosomal protein L18 rplF 3430524 - 3429991 - | 50S ribosomal protein L6 rpsH 3430929 - 3430537 - | 30S ribosomal protein S8 rpsN 3431268 - 3430963 - | 30S ribosomal protein S14 rplE 3431822 - 3431283 - | 50S ribosomal protein L5 TERM 4329 3431660 - 3431678 + g 93 -6 -5.24531 | ATGCTGCCAGGTCTG CTGCTG CGTTATC CAGCAG TTTTTTGTCAGCGAT TERM 4330 3431766 - 3431777 + g 81 -4.4 -5.12617 | opp_overlap 3431766, overlap 3431745 AGAATTGTAGTTAAA CTCA GTCA TGAG TTTTTTAACTACTTC rplX 3432151 - 3431837 - | 50S ribosomal protein L24 rplN 3432533 - 3432162 - | 50S ribosomal protein L14 TERM 4331 3432648 - 3432673 + r 90 -14.9 -3.25823 | opp_overlap 3432648, overlap 3432652 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4332 3432673 - 3432648 - R 100 -14.9 -5.252 | opp_overlap 3432648 3432652 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4333 3432652 - 3432669 + r 91 -11.3 -4.29106 | opp_overlap 3432648, overlap 3432648 GGTAGAAAAAATAAA CGGCTCA TTTC TGAGCCG TTTATTCGTATCGAG rpsQ 3432952 - 3432698 - | 30S ribosomal protein S17 TERM 4334 3432920 - 3432873 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 3432892 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA rpmC 3433143 - 3432952 - | 50S ribosomal protein L29 rplP 3433553 - 3433143 - | 50S ribosomal protein L16 rpsC 3434267 - 3433566 - | 30S ribosomal protein S3 rplV 3434617 - 3434285 - | 50S ribosomal protein L22 rpsS 3434910 - 3434632 - | 30S ribosomal protein S19 rplB 3435748 - 3434927 - | 50S ribosomal protein L2 TERM 4335 3435784 - 3435804 + r 75 -9.7 -3.57462 | opp_overlap 3435787, overlap 3435787 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3436068 - 3435766 - | 50S ribosomal protein L23 TERM 4336 3436035 - 3436023 - G 78 -9.1 -3.85817 | ACGCTTTTTCAGAAA CGTGC GGT GCACG CAGCACCTTCAGCAG rplD 3436670 - 3436065 - | 50S ribosomal protein L4 TERM 4337 3436638 - 3436650 + g 78 -10.5 -3.42663 | opp_overlap 3436633, overlap 3436637 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3437310 - 3436681 - | 50S ribosomal protein L3 rpsJ 3437654 - 3437343 - | 30S ribosomal protein S10 TERM 4338 3438115 - 3438153 + G 73 -3.9 -4.84311 | gap 1, overlap 3438117 CAAAGCATGGCTTGT TACCTGA-CAGATTTACG TGCC CGTTACTCTGGTCAGGTC TTTTGTTCTATCAAG hopD 3438033 - 3438320 + | putative leader peptidase bfr 3438973 - 3438497 - | bacterioferritin, iron storage and detoxification protein TERM 4339 3438814 - 3438790 - G 79 -2.2 -5.26119 | gap 1, opp_overlap 3438790 3438792, overlap 3438785 3438792 CTTCTAAAAACAAAA TACGCTCGATA TATT TATC-AGCGTG TTTCATCTCATCGAT yheA 3439240 - 3439046 - | bacterioferritin-associated ferredoxin TERM 4340 3439378 - 3439393 + r 95 -11.8 -4.27316 | opp_overlap 3439378 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC TERM 4341 3439393 - 3439378 - R 100 -11.8 -4.72986 | opp_overlap 3439378 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC tuf 3440607 - 3439423 - | elongation factor Tu TERM 4342 3440561 - 3440577 + g 70 -4.4 -4.4715 | gap 1, opp_overlap 3440561 ACGTGGCCGATAGTA CCG-ACG TTAA CGTGCGG TTTTGTACGTTCAAA TERM 4343 3440652 - 3440627 - R 93 -15.5 -2.78935 | opp_overlap 3440623 3440622 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA fusA 3442792 - 3440918 - | GTP-binding protein chain elongation factor EF-G TERM 4344 3442864 - 3442839 - R 82 -11.2 -3.63895 | gap 1, opp_overlap 3442829, overlap 3442829 TTTAAGTAGCCCAAA GCGGGCTGCTT ACTGG AAGC-GCCCGC CTGGTGACTAAAACT rpsG 3443359 - 3442889 - | 30S ribosomal protein S7 rpsL 3443830 - 3443456 - | 30S ribosomal protein S12 TERM 4345 3443900 - 3443878 - R 100 -12.8 -4.7268 | AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG yheL 3444243 - 3443956 - | tRNA 2-thiouridine synthesizing protein B yheM 3444610 - 3444251 - | hypothetical protein yheN 3444996 - 3444610 - | hypothetical protein yheO 3445718 - 3444996 - | hypothetical protein TERM 4346 3445513 - 3445544 + g 76 -7.4 -4.21194 | gap 1 ATCTTCCGGCCTGTA TGTTCA-CCGTTAGC AAT GCGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4347 3445743 - 3445730 - R 78 -6.7 -4.59226 | opp_overlap 3445740 3445741 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTAACTTT TERM 4348 3445802 - 3445814 + r 72 -9.1 -3.54919 | opp_overlap 3445800 3445798 3445802 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 4349 3445841 - 3445884 + r 72 -4.7 -4.61482 | gap 2, opp_overlap 3445853, overlap 3445842 3445853 AATTATATCCGGCCT GTAATAAAAAAACCGCCGCCT GGTC AGGCGGCGG--TTCTTAATGC TTATTTTTTAGCAGA TERM 4350 3445842 - 3445887 + r 76 -4.2 -5.0133 | gap 2, opp_overlap 3445853, overlap 3445841 3445853 ATTATATCCGGCCTG TAA-TA-AAAAAACCGCCGCCT GGTC AGGCGGCGGTTCTTAATGCTTA TTTTTTAGCAGAATC TERM 4351 3445853 - 3445874 + r 100 -17.3 -3.79396 | opp_overlap 3445853, overlap 3445841 3445842 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT TERM 4352 3445874 - 3445853 - R 100 -17.3 -5.7946 | opp_overlap 3445853 3445841 3445842 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT fkpA 3446697 - 3445885 - | FKBP-type peptidyl-prolyl cis-trans isomerase slyX 3446918 - 3447136 + | hypothetical protein TERM 4353 3447137 - 3447175 + T 100 -14.6 -4.29325 | opp_overlap 3447149, overlap 3447149 CCGCCACATTATTGA GGCGTAAAAAAAGCGGGG ATT CCCCGCTTTTTTGTCACC TTTTCGGTATTAGTG TERM 4354 3447149 - 3447163 + T 100 -12.8 -5.28826 | opp_overlap 3447149, overlap 3447137 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT TERM 4355 3447163 - 3447149 - T 100 -12.8 -5.42259 | opp_overlap 3447149 3447137 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT slyD 3447775 - 3447185 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4356 3447749 - 3447760 + g 72 -5.8 -4.39989 | overlap 3447733 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3448070 - 3447870 - | hypothetical protein kefB 3449741 - 3448080 - | glutathione-regulated potassium-efflux system protein KefB yheR 3450368 - 3449817 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 4357 3451796 - 3451772 - g 93 -12.9 -3.6053 | overlap 3451768 3451781 TGGGCGATAAAGTAA CCGAAGAAACG CGC CGCTTCTCCGG TGGGGAAAAAGCCCG TERM 4358 3451823 - 3451807 - g 70 -5 -4.56597 | opp_overlap 3451807, overlap 3451781 TCCGGTGGGGAAAAA GCCCGC CTGGT GCTGGC ATTAATTGTCTGGCA yheS 3450499 - 3452412 + | putative ABC transporter ATP-binding protein TERM 4359 3452565 - 3452578 + G 70 -4.5 -4.45083 | TGGCAGCGGCTGGAG TTGCC CGAC GGCGA TTTTGTCGATCTCGC yheT 3452412 - 3453434 + | putative hydrolase TERM 4360 3453566 - 3453542 - g 78 -8.5 -4.20769 | ACACTTGAACAGAAA GTCGCCGACGT CAA ACGCCAGCTAC AGTGCGGAGAAGCGG yheU 3453428 - 3453646 + | hypothetical protein prkB 3453700 - 3454569 + | phosphoribulokinase yhfA 3455028 - 3454624 - | hypothetical protein TERM 4361 3454974 - 3454962 - G 76 -7.7 -4.25104 | TGCCGTCCATTAAAA TCTGG TGA CCAGA GGCGGATTCGCCCAG TERM 4362 3455440 - 3455415 - g 70 -10.5 -2.76171 | overlap 3455412 ACCCATCCAAGAGCA CGCTTATTCAC CAGG GTGAAAAAGCG GAAACGCTGTACTAC crp 3455330 - 3455962 + | cAMP-regulatory protein TERM 4363 3455974 - 3455998 + F 100 -16.5 -4.86731 | overlap 3455964 TTAATCCCGTCGGAG TGGCGCGTTAC CTG GTAGCGCGCCA TTTTGTTTCCCCCGA yhfK 3456013 - 3458103 + | hypothetical protein argD 3459390 - 3458170 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein pabA 3460039 - 3459476 - | para-aminobenzoate synthase component II fic 3460673 - 3460071 - | cell filamentation protein Fic TERM 4364 3460368 - 3460382 + g 75 -5.6 -4.70659 | overlap 3460370 CTCCAGATCCTGCAT CAGGGC ATT GCCCTC TTTTTCGATATAAGC TERM 4365 3460370 - 3460380 + g 74 -8.2 -3.96999 | overlap 3460368 CCAGATCCTGCATCA GGGC ATT GCCC TCTTTTTCGATATAA yhfG 3460830 - 3460663 - | hypothetical protein TERM 4366 3460925 - 3460904 - R 100 -17.3 -3.46602 | GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG ppiA 3461516 - 3460935 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4367 3461742 - 3461761 + H 73 -2.1 -5.26119 | overlap 3461743 AAAATCGCCCGCTCG CGGCATA TCCCGC TATGCCA TTTTATTTTTGAACG TERM 4368 3461833 - 3461856 + G 72 -8.8 -3.78934 | GGATTAGCTTTCTCT CCTACGCACT GACT GGTGCGTTGG TTATTGTCACCGGGA TERM 4369 3462171 - 3462188 + G 74 -7.7 -4.015 | gap 1, overlap 3462175 ATGTATGAAGGGCGT CAGCGCGG TTC CCGC-CTG TTATTTACTGACTCC TERM 4370 3462380 - 3462370 - g 85 -6.8 -4.73388 | AACGTGCACCAAAAA CGGA TGC TCCG GTAGAGAAAGAAAAG yhfC 3461787 - 3462968 + | hypothetical protein TERM 4371 3462976 - 3463003 + F 93 -10.5 -4.43213 | overlap 3462977 CTCATTAATTGCTAA TGCCGGACGGC ACTATC GTCGTCCGGCC TTTTCCTCTCTTCCC TERM 4372 3462977 - 3463002 + F 86 -14 -3.25205 | overlap 3462976 TCATTAATTGCTAAT GCCGGACGGC ACTATC GTCGTCCGGC CTTTTCCTCTCTTCC TERM 4373 3465042 - 3465019 - g 70 -5.2 -4.3467 | gap 1, opp_overlap 3465027 3465030, overlap 3465005 3465020 ATCTCTACACCAAAA TCACC-GGCTC CCA GCGCCTGGCGA TGTTTGGCGCACAGA nirB 3463230 - 3465773 + | nitrite reductase (NAD(P)H) subunit TERM 4374 3465981 - 3465996 + G 70 -6.1 -4.28774 | opp_overlap 3465992 TGTGGGTCGCCAGCC CGCTG AAAAAA CAGCG TTTTCGCTTAAGTGA TERM 4375 3466005 - 3465992 - g 71 -2.3 -5.00884 | opp_overlap 3465981 3466000 AGCCCGCTGAAAAAA CAGCG TTTT CGCTT AAGTGATGGCTTGTG nirD 3465770 - 3466096 + | nitrite reductase small subunit TERM 4376 3466105 - 3466125 + F 89 -8.9 -4.68994 | overlap 3466106 CGGTTAATGTTTTAA CGGGAGGCG CAA TGCCTCCCC TTTTTGCATGGTCCT TERM 4377 3466106 - 3466124 + F 85 -12.4 -3.40674 | overlap 3466105 GGTTAATGTTTTAAC GGGAGGCG CAA TGCCTCCC CTTTTTGCATGGTCC TERM 4378 3466135 - 3466168 + F 85 -6.1 -5.16472 | gap 1, overlap 3466136 CTCCCCTTTTTGCAT GGTCCTGTAATG-ACC TTC GGTATATTGCAGGACA TTTTTTAAACTTTTT TERM 4379 3466136 - 3466167 + F 79 -9.6 -3.67443 | gap 1, overlap 3466135 TCCCCTTTTTGCATG GTCCTGTAATG-ACC TTC GGTATATTGCAGGAC ATTTTTTAAACTTTT TERM 4380 3466675 - 3466658 - g 74 -7.7 -4.07568 | opp_overlap 3466658 TCGCGCTGGCTAAAA CCACTGC ACCG GCAATGG TACTGTTCTTCAAAG nirC 3466474 - 3467028 + | nitrite reductase, NirC protein TERM 4381 3467827 - 3467842 + G 82 -9 -4.25104 | ATGAATCTGGTACGC CGCGAT GCTG ATCGCG TTTTCGTCGGCAAAC TERM 4382 3468312 - 3468276 - g 81 -9.3 -4.11484 | opp_overlap 3468288, overlap 3468281 GGCAATTGTCGAAAA CGGAACGGCAGTCACGC AGC GCGTGATTGACGGTACG CTCACGCAACTCGGT TERM 4383 3468307 - 3468281 - g 76 -10.8 -3.36823 | opp_overlap 3468288, overlap 3468276 TTGTCGAAAACGGAA CGGCAGTCACGC AGC GCGTGATTGACG GTACGCTCACGCAAC cysG 3467047 - 3468420 + | siroheme synthase TERM 4384 3468430 - 3468447 + F 86 -11.3 -3.74762 | CATTAATTTAACCCG GGCCAGA GAAT TCTGGCC TTCTTAATGACTCTT TERM 4385 3468523 - 3468485 - f 76 -4 -4.9448 | opp_overlap 3468487, overlap 3468487 ATTCAGCAAATAAAA CATAACCCCTTAATAAAT ATT ATCTGCTAATGGGTTATA TTCACCGTTACAGCG yhfL 3468667 - 3468834 + | hypothetical protein TERM 4386 3468874 - 3468901 + F 93 -10.6 -4.65722 | gap 1, overlap 3468876 CCGGTTTAATTGCCC GACGCCCTCTGGA TTT TCC-GAGGGCGTA TTTGTTTCTATGTCC TERM 4387 3468876 - 3468899 + F 95 -13.2 -3.92887 | gap 1, overlap 3468874 GGTTTAATTGCCCGA CGCCCTCTGGA TTT TCC-GAGGGCG TATTTGTTTCTATGT TERM 4388 3471105 - 3471078 - g 86 -6.3 -5.06816 | gap 1, opp_overlap 3471096 ACCTGGGAAGAAAAA GGCC-GCCAGCT TGGTG AACTGGCCAGCC AGTGGCCGATGATTT frlB 3470466 - 3471509 + | fructoselysine-6-P-deglycase TERM 4389 3471517 - 3471538 + F 90 -12.9 -3.53343 | opp_overlap 3471511, overlap 3471518 AATATTAATCCCTCT CCCGGCCCG GCAA CGGGCCGGA TTTACGCAAGGAGTT TERM 4390 3471518 - 3471537 + F 95 -16.4 -2.71791 | opp_overlap 3471511, overlap 3471517 ATATTAATCCCTCTC CCGGCCCG GCAA CGGGCCGG ATTTACGCAAGGAGT TERM 4391 3471581 - 3471566 - g 76 -7.6 -4.26903 | GTTACCCGATGAAAA CAGGTA TGTT TACCTG CGGCCACCAGCGGCT yhfP 3471559 - 3472389 + | fructoselysine 3-epimerase yhfQ 3472386 - 3473171 + | fructoselysine 6-kinase TERM 4392 3473173 - 3473210 + F 73 -9.9 -3.33696 | opp_overlap 3473178, overlap 3473175 3473178 ACGGTGCCTGGTAGG TATAACGTTGGCGTGAG CATC TTCACGCCAACGTGCTG TTACTTGCCGGAAAA TERM 4393 3473175 - 3473208 + F 74 -10.3 -3.23853 | opp_overlap 3473178, overlap 3473173 3473178 GGTGCCTGGTAGGTA TAACGTTGGCGTGAG CATC TTCACGCCAACGTGC TGTTACTTGCCGGAA TERM 4394 3473205 - 3473178 - f 100 -15.7 -3.35679 | opp_overlap 3473175 3473173 3473178 GCCTGGTAGGTATAA CGTTGGCGTGA GCATCT TCACGCCAACG TGCTGTTACTTGCCG TERM 4395 3473178 - 3473205 + F 100 -16.4 -2.80699 | opp_overlap 3473178, overlap 3473175 3473173 GCCTGGTAGGTATAA CGTTGGCGTGAG CATC TTCACGCCAACG TGCTGTTACTTGCCG yhfR 3473205 - 3474002 + | DNA-binding transcriptional regulator FrlR TERM 4396 3474014 - 3474057 + T 100 -14.7 -4.18018 | gap 1, opp_overlap 3473999 3474004 3474003 3474018 3474020, overlap 3474015 3474019 TTAACCGTAGGCCGG ATAAGATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCA-CTGAA TTTTACATCCCGCAC TERM 4397 3474015 - 3474056 + T 100 -18.2 -3.10597 | gap 1, opp_overlap 3473999 3474004 3474003 3474018 3474020, overlap 3474014 3474019 TAACCGTAGGCCGGA TAAGATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCA-CTGA ATTTTACATCCCGCA TERM 4398 3474053 - 3474018 - T 100 -19.9 -3.30124 | gap 1, opp_overlap 3474015 3474014 3474019, overlap 3474004 3474003 3474020 CCGTAGGCCGGATAA GATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCA-C TGAATTTTACATCCC TERM 4399 3474019 - 3474053 + T 100 -20.1 -2.76404 | opp_overlap 3474004 3474003 3474018 3474020, overlap 3474015 3474014 CGTAGGCCGGATAAG ATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCAC TGAATTTTACATCCC TERM 4400 3474052 - 3474020 - T 100 -23.6 -3.21924 | opp_overlap 3474019 3474015 3474014, overlap 3474004 3474003 3474018 GTAGGCCGGATAAGA TGCGCCAGCATCGC ATCCG GCGATGCTGGCGCA CTGAATTTTACATCC yhfS 3475247 - 3474162 - | hypothetical protein yhfT 3476563 - 3475259 - | putative transport system permease protein yhfU 3476967 - 3476575 - | hypothetical protein yhfV 3477610 - 3476939 - | putative hydrolase yhfW 3479040 - 3477814 - | putative mutase yhfX 3480204 - 3479041 - | hypothetical protein TERM 4401 3480169 - 3480183 + g 76 -9.2 -3.72984 | opp_overlap 3480168, overlap 3480181 TGCGGCGGAAATCAG CGCCGG GTT CTGGCG TTTCAATGCTTCTAC TERM 4402 3480228 - 3480242 + r 82 -2.9 -5.54264 | opp_overlap 3480237, overlap 3480232 3480237 CTCGTTTCTGTTCCT TGAAT TAAAT ATTCA TTTTTTTGAATATTT yhfY 3480692 - 3480288 - | hypothetical protein yhfZ 3481353 - 3480667 - | hypothetical protein TERM 4403 3481699 - 3481712 + r 75 -9.5 -3.58343 | opp_overlap 3481699 AAGAGGATAAAAAAA CCGGG TTTC CCCGG TTTCAGAGTGATGAC TERM 4404 3481712 - 3481699 - R 100 -9.5 -5.70829 | opp_overlap 3481699 AAGAGGATAAAAAAA CCGGG TTTC CCCGG TTTCAGAGTGATGAC trpS 3482846 - 3481842 - | tryptophanyl-tRNA synthetase TERM 4405 3481938 - 3481985 + g 95 -15.9 -3.06183 | gap 1, overlap 3481920 3481947 GTCTTTCATCACCTG TTGCAGGAAGGCT-TCATCGTT GCGGA AACGGTGATAGCGTTCCTGCAA TTCAGTCAGCATACC gph 3483597 - 3482839 - | phosphoglycolate phosphatase rpe 3484267 - 3483590 - | ribulose-phosphate 3-epimerase TERM 4406 3484272 - 3484284 + r 78 -6.3 -4.61482 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTTTCGCGGG dam 3485121 - 3484285 - | DNA adenine methylase TERM 4407 3484681 - 3484701 + g 79 -2.5 -5.24129 | AGCGAAGTGATACAA CTCTGCTTC CGG GAAATAGGG TTTTTTGTAGCGGCC TERM 4408 3484812 - 3484792 - G 82 -3.1 -5.19879 | overlap 3484794 3484797 GTTCAAATATAAAAA CAGTACCGC CCG ACGGAACGG ATCCTGGCTTTTGTT TERM 4409 3485005 - 3484984 - G 100 -13.1 -4.60073 | overlap 3484999 GATATAACGAGAAAA GTCGGTGTT GAGA AACACCGAC CCGGCACCTACAAAA damX 3486520 - 3485228 - | hypothetical protein TERM 4410 3485878 - 3485891 + g 75 -6.7 -4.431 | TGACCGCCACATTGT TCAGC TGTT GCTGA TTTTGTGGCTGGGTC TERM 4411 3486596 - 3486578 - R 77 -11 -3.15621 | opp_overlap 3486575, overlap 3486576 AACCTGAAGCTAATA GACCGCTT GAT AAGCGGCC TGACCTTTCTTGTTG aroB 3487700 - 3486612 - | 3-dehydroquinate synthase aroK 3488278 - 3487757 - | shikimate kinase I TERM 4412 3488066 - 3488084 + g 72 -4.5 -4.64676 | AATACCCTGTTTCTC GGTCAAC TCATT GATGACC TTTTCTTCGCGATCG TERM 4413 3488342 - 3488316 - R 83 -10 -4.05446 | TTCGTTAATGATAAA CCCGCTTCGCTC AGA GAGCGCCGCAGG ACATGAACTGAAACC TERM 4414 3488537 - 3488521 - R 83 -6.5 -5.06451 | GATTAGCGTAAAAAA GACAGCA AAA TGCCGCC TGAATGATAAATCAT hofQ 3489917 - 3488679 - | outer membrane porin HofQ TERM 4415 3488845 - 3488831 - G 75 -5.6 -4.59773 | TTTTACGGGTAAAAA TGCCGC CCA GCGCCA ACGTTTCTCCGCTTT TERM 4416 3489420 - 3489467 + g 72 -7.8 -3.87075 | gap 1 TACCCACTGTTCAAG CGCGCTTAACGCCGTTTTGTTAT CTC GTAGCAAAA-GGCGATTGGTGCG TTTATCGACGGTCAT yrfB 3490596 - 3490225 - | hypothetical protein yrfC 3491188 - 3490649 - | hypothetical protein yrfD 3491994 - 3491188 - | hypothetical protein TERM 4417 3491987 - 3492003 + g 78 -12.3 -2.92091 | ATGATCTCCTTATCA CCCGTCA CTC TGACGGG TATATCAATGCGTCT mrcA 3492063 - 3494639 + | peptidoglycan synthetase TERM 4418 3494660 - 3494647 - T 93 -9.5 -4.72272 | opp_overlap 3494647 3494656 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA TERM 4419 3494647 - 3494660 + T 87 -9.5 -4.28774 | opp_overlap 3494647, overlap 3494656 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA nudE 3495364 - 3494804 - | ADP-ribose diphosphatase NudE TERM 4420 3496686 - 3496736 + G 74 -7.6 -4.10178 | gap 1 AAAAACTTTCCGTTA CAGCACTGGCTGCGCAGTACG ATTATCGCTG CGGGCT-CGCTGCTAGTGCTG TTTATGCTGTTATTC yrfF 3495684 - 3497819 + | putative dehydrogenase TERM 4421 3497861 - 3497820 - f 79 -9.5 -3.67775 | gap 1, opp_overlap 3497824, overlap 3497823 AGCCTTATCGAATAA CACGTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT-TG CTTCACTCTGGAGAT TERM 4422 3497859 - 3497823 - f 78 -12.3 -2.64872 | opp_overlap 3497824, overlap 3497820 CTTATCGAATAACAC GTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT TGCTTCACTCTGGAG TERM 4423 3497824 - 3497858 + F 100 -18 -3.39142 | opp_overlap 3497823 3497820 TTATCGAATAACACG TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA yrfG 3497839 - 3498552 + | putative phosphatase TERM 4424 3498608 - 3498618 + G 75 -4.6 -4.82901 | CTGGATAAATGGCTA TGGG CTG CCCG TTTTTATAAAACCCG yrfH 3498563 - 3498964 + | ribosome-associated heat shock protein Hsp15 TERM 4425 3499316 - 3499291 - g 93 -10.4 -4.44974 | opp_overlap 3499290 CGAAATTCCAGAAAA TGCCGACCTG AAAACG CTGGTCGGCA ATGGTTACGTGGTGA hslO 3498989 - 3499858 + | Hsp33-like chaperonin TERM 4426 3499876 - 3499899 + T 100 -16.8 -4.15106 | opp_overlap 3499871 3499887 TCATTAATGAGTATG TCCGGCAGAG AGGG CTCTGCCGGA TTTTACGACTTAATG yhgE 3501726 - 3500002 - | putative transport protein TERM 4427 3501592 - 3501580 - G 70 -5.5 -4.34771 | overlap 3501581 TAAAACGGATGAAAA CGCGA CGG TCGCA GGCACGCCATAAACA SF3421 3501933 - 3501802 - | hypothetical protein TERM 4428 3501968 - 3501989 + H 75 -3 -5.26918 | overlap 3501969 CGATAATAGCAACCG TTTCGTGA CAGGAA TCACGGAG TTTTTTGTCAAATAT TERM 4429 3502438 - 3502424 - g 73 -11.4 -2.77043 | opp_overlap 3502422, overlap 3502423 GGCAGCATCTGAAAG GCCTGG TGA CCAGGC AGCTTTCCGGCAAAC TERM 4430 3503698 - 3503679 - g 73 -11.4 -2.59797 | overlap 3503678 3503676 CTTCGATAAATACAC CGACACCC CTGC GGGTGCCG CGCTGGTAGCGGCTG pckA 3502105 - 3503727 + | phosphoenolpyruvate carboxykinase TERM 4431 3503797 - 3503776 - T 100 -13.7 -4.65153 | opp_overlap 3503776 TTATAGAAAGCAAAA CGGGAGGCA CCTT CGCCTCCCG TTTATTTACCCTTCT TERM 4432 3503776 - 3503797 + T 100 -13 -4.46835 | opp_overlap 3503776 TTATAGAAAGCAAAA CGGGAGGC ACCTTC GCCTCCCG TTTATTTACCCTTCT envZ 3505155 - 3503803 - | osmolarity sensor protein TERM 4433 3505100 - 3505068 - G 73 -12 -2.73443 | overlap 3505067 GCACCACCAGATAAG TCGTCACCAGGCTG GCGAA CAGCAAGGTGACGA TGAGCAATAACGTAC ompR 3505871 - 3505152 - | osmolarity response regulator TERM 4434 3505391 - 3505377 - G 77 -10 -3.62096 | opp_overlap 3505383 3505388, overlap 3505381 CTTCAGTACCGCAAA CTCACC GCT GGTGAG CGGCATCGGCTCATC greB 3506099 - 3506575 + | transcription elongation factor GreB TERM 4435 3508203 - 3508191 - g 74 -10.5 -3.14132 | CTGTTCCGCTATTAA CCCGC GTG GCGGG CCTGACGCGCATGAT TERM 4436 3508565 - 3508544 - g 84 -7.9 -4.62904 | gap 1, opp_overlap 3508543 3508542, overlap 3508545 AAAGAGCTGGAAAAA CCGGGTCGCG ATC CGCGTCC-GG AATTTAAAACCGCTC yhgF 3506771 - 3508993 + | hypothetical protein TERM 4437 3509095 - 3509073 - f 100 -17.8 -4.52589 | opp_overlap 3509073 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGCAC TTTTATTCCACAGCC TERM 4438 3509073 - 3509095 + F 100 -17.8 -4.63218 | opp_overlap 3509073 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGCAC TTTTATTCCACAGCC feoA 3509431 - 3509658 + | ferrous iron transport protein A TERM 4439 3510522 - 3510533 + G 74 -5.8 -4.53036 | TGCTCAACCGTTTCC TCGG TCTG CCGA TTTTCCTCTTTGTGA TERM 4440 3511305 - 3511287 - g 77 -8.2 -4.11216 | overlap 3511300 CGTTGAGCGGGAAAA TCGTCGAT AAC ATCAACGA CTCGGCGCTGGCTTC feoB 3509675 - 3511996 + | ferrous iron transport protein B yhgG 3511996 - 3512232 + | hypothetical protein TERM 4441 3512259 - 3512283 + F 100 -12.2 -5.08824 | gap 1, opp_overlap 3512259 CGCCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4442 3512283 - 3512259 - f 95 -12.2 -4.07568 | gap 1, opp_overlap 3512259 CGCCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4443 3512323 - 3512311 - f 80 -6.3 -4.82901 | GGCTTTCCATAAAAA TGCAA TTC TTGCA GCGCAACGTAAGTTC TERM 4444 3512462 - 3512446 - g 71 -2.9 -4.77036 | overlap 3512449 CGCCATGAGTAAAAA GCAGAGT TCC ACCCCAC ATGATGCGCTGTTCA yhgA 3512435 - 3513322 + | hypothetical protein SF3431 3513398 - 3513763 + | insertion sequence 2 OrfA protein SF3432 3513721 - 3514626 + | insertion element IS2 transposase InsD SF3433 3514722 - 3514991 + | hypothetical protein SF3434 3514985 - 3515350 + | PemK protein bioH 3516139 - 3515351 - | carboxylesterase BioH TERM 4445 3515442 - 3515429 - G 70 -5.2 -4.44046 | opp_overlap 3515429 CGGATGCGAAATAAA CGGC GCATGG GCCG CTTTGGCGAAGATAT TERM 4446 3516000 - 3515975 - G 72 -8.9 -3.75665 | TGACAGCGCACCAAA TCCCCGGCTAC GCCC GAAGCCGGGCA GGTCAACAAGGTGCA yhgH 3516177 - 3516860 + | gluconate periplasmic binding protein yhgI 3516919 - 3517494 + | putative DNA uptake protein gntT 3517855 - 3519171 + | high-affinity transport permease for gluconate TERM 4447 3519208 - 3519177 - T 77 -11 -3.23393 | gap 1, overlap 3519175 3519178 GGTGATTTGATAACA CTGACTGCCGGATGC ATC GCATCCGACA-TCAA CCGCACTCTACTTCT TERM 4448 3519207 - 3519178 - T 78 -12.3 -2.53822 | gap 1, overlap 3519177 3519175 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGACA-TCA ACCGCACTCTACTTC malQ 3521300 - 3519216 - | 4-alpha-glucanotransferase TERM 4449 3519315 - 3519327 + g 74 -3.3 -4.93296 | opp_overlap 3519294 3519293 3519291 3519315, overlap 3519292 AAGCGTTGCGGAAAG CTTGC GTC GCCAG TTTTTATACTGGTAA TERM 4450 3520253 - 3520239 - G 74 -10 -3.56092 | overlap 3520240 CCAGCAGGCGGCAAA CTGGCT GTA AGCCAG CCACTGCAACCAGAG TERM 4451 3520433 - 3520410 - G 72 -8.8 -3.74872 | overlap 3520425 ATGTAGCGCATCAAA GGCAGCCTGC CAGA ACAGGCTGTC GCCCTGCTCTGCAAC TERM 4452 3521145 - 3521171 + g 85 -13.1 -3.18582 | gap 1, overlap 3521142 3521141 3521162 3521163 GACATTCGGGACTGG CGTTACCGCCAC TTTC GTGGCGGTA-CG TTGATGCATCGCGTC malP 3523703 - 3521310 - | maltodextrin phosphorylase TERM 4453 3522220 - 3522236 + g 70 -3.7 -4.62872 | TATTGCTGACGGAAT TTCGC ATCATCA GCGAA TTTTTCCAGATTGAT TERM 4454 3522309 - 3522326 + g 79 -9.9 -3.72576 | ATCCAACAGAGCCGC CAGTGCA GGGT TGCACTG TTTGATCCAGCGACG TERM 4455 3522887 - 3522903 + g 72 -5.1 -4.57073 | CACACTGGAAGTATT GCTGC ATCAGGC GCAGC TTTTTACCGGCAGTA TERM 4456 3524126 - 3524143 + r 72 -6.3 -4.21676 | gap 1, overlap 3524126 3524128 AGGGAAACCAGTATT C-ACGCTG GAT CAGCGTCG TTTTAGGTGAGTTGT TERM 4457 3524624 - 3524612 - R 78 -5.5 -4.75372 | overlap 3524613 ACGATGGAGCAAAAA CGGCA ATA TGCCA GCCTGACGTCACTCT TERM 4458 3526642 - 3526624 - R 73 -11 -2.55074 | opp_overlap 3526622, overlap 3526614 TCGAAGGCGAAGCGA TGGCGCAA CAA CTGCGCCA GCTGATTCAACTTAA yhgJ 3527657 - 3527052 - | RNA 3'-terminal-phosphate cyclase TERM 4459 3527710 - 3527671 - R 72 -6.3 -4.37092 | gap 1, opp_overlap 3527671 3527672 3527674, overlap 3527672 3527673 ACCCGGCGGATAAAA TCCGCAGGCGGCGCCGAC GGGTT ATCGGTGCCGCC-GCTCA CTTCAACACGCGAAG TERM 4460 3527674 - 3527707 + r 83 -13.9 -2.52464 | gap 1, opp_overlap 3527672 3527673 3527671, overlap 3527672 3527671 CGGCGGATAAAATCC GCAGGCGGCGCCGA CGGGTTA TCGGTGCCGCC-GC TCACTTCAACACGCG rtcB 3529298 - 3528072 - | hypothetical protein TERM 4461 3529201 - 3529188 - G 77 -5.9 -4.65263 | opp_overlap 3529186 3529188 ATGTTTGAAAATAAA CGGCA TCTT CGCCG TATTAATAAGTTGCT TERM 4462 3529930 - 3529914 - g 71 -2.1 -5.00884 | overlap 3529917 ACTCCGCGCAAAAAA GAACAGC CGC GCGGCCC AGGTGAAGTGACGAT TERM 4463 3530943 - 3530958 + G 79 -4.6 -4.93696 | GCAAAGTCGCTTTCT GCTGCC GGAC GACAGC TTTTTGATGTTTCGC rtcR 3529479 - 3531077 + | putative 2-component regulator glpR 3531817 - 3531059 - | DNA-binding transcriptional repressor GlpR TERM 4464 3531571 - 3531583 + g 90 -6.9 -5.12068 | GCTCCGCCACTTTGC GGGCG ATG CGCTC TTTTTCTTCGGTCTG glpG 3532658 - 3531834 - | intramembrane serine protease GlpG TERM 4465 3532518 - 3532477 - G 74 -10.1 -3.48276 | opp_overlap 3532466 3532477, overlap 3532478 3532504 CTGGCCGCCAGATAA CGCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGCC CGCACGCGCTCGGCC TERM 4466 3532517 - 3532478 - G 84 -13.6 -2.68823 | opp_overlap 3532466 3532477, overlap 3532477 3532504 TGGCCGCCAGATAAC GCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGC CCGCACGCGCTCGGC TERM 4467 3532524 - 3532504 - G 75 -6.7 -4.36914 | overlap 3532478 3532477 GGGTTTTCGAGAAAA CGCGCCAGC TCC GCCCGCACG CGCTCGGCCTGGGAC TERM 4468 3532638 - 3532620 - G 72 -5.8 -4.33621 | overlap 3532616 3532622 CATGTAATCAACAAA CGCCTGCG CCA CGCGGGGG TTAGCAAAAGAGGTA glpE 3533035 - 3532709 - | thiosulfate sulfurtransferase TERM 4469 3533175 - 3533190 + H 71 -7.6 -3.95219 | opp_overlap 3533175 GATTCTTTGCTAATA TGTTCG ATAA CGAACA TTTATGAGCTTTAAC glpD 3533225 - 3534730 + | glycerol-3-phosphate dehydrogenase yzgL 3535229 - 3534936 - | hypothetical protein TERM 4470 3535326 - 3535355 + r 89 -9.3 -4.59109 | overlap 3535318 3535328 GGACCCTTTGGCCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4471 3535328 - 3535353 + r 100 -16.3 -3.90762 | overlap 3535318 3535326 ACCCTTTGGCCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SF3450 3536683 - 3535337 - | IS4 orf TERM 4472 3536673 - 3536698 + g 73 -9.1 -3.61398 | opp_overlap 3536673 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4473 3536698 - 3536673 - G 100 -9.8 -5.61596 | opp_overlap 3536673 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC glgP 3539230 - 3536783 - | glycogen phosphorylase TERM 4474 3537022 - 3537001 - G 72 -10.1 -3.38316 | opp_overlap 3537000 TGATCAGCGAATCAA CCAGATCGC GATA GCGACCCGG ATCTTCCGGACTGAA TERM 4475 3538848 - 3538880 + g 88 -8.9 -4.72497 | overlap 3538849 3538851 AAGCAAGCCGCCAGA CGTCCCAGGCCACCG TTA CCGAGGCCTGGGTCA TTTTCTTCATCAATC TERM 4476 3538849 - 3538879 + g 86 -12.4 -3.42775 | overlap 3538848 3538851 AGCAAGCCGCCAGAC GTCCCAGGCCACCG TTA CCGAGGCCTGGGTC ATTTTCTTCATCAAT TERM 4477 3538851 - 3538877 + g 95 -13.6 -3.27725 | overlap 3538849 3538848 CAAGCCGCCAGACGT CCCAGGCCACCG TTA CCGAGGCCTGGG TCATTTTCTTCATCA glgA 3540682 - 3539249 - | glycogen synthase TERM 4478 3539916 - 3539928 + g 82 -7.7 -4.46212 | opp_overlap 3539909 AACAGTAAGTCCGTC TCTGG ACT CCAGA TTTTCTCGTCCACGC glgC 3541977 - 3540682 - | glucose-1-phosphate adenylyltransferase TERM 4479 3541486 - 3541500 + g 84 -7.8 -4.60487 | opp_overlap 3541486 3541485 TGGCATACAAGCAAC GGTGCA ACG TGCGCC TTTTTCGACGTGATC glgX 3543968 - 3541995 - | glycogen debranching enzyme TERM 4480 3543601 - 3543572 - G 70 -10 -3.2056 | opp_overlap 3543588 AGTCATAGTGATCAA CCACCACTACGC ATTTCG GCGCAATGGCGG CGTTGTCGCGATAGT glgB 3546151 - 3543965 - | glycogen branching enzyme TERM 4481 3544542 - 3544552 + g 83 -5.4 -5.0538 | TCGCCCGGCATGCGG TCGA GAA TCGA TTTTTTACCGTGGAC TERM 4482 3545428 - 3545446 + g 91 -7.4 -5.09173 | CATAAATAGAGATTG GCGCATCA AAC TGATTCGC TTTTTTGCGCTCTTC TERM 4483 3546405 - 3546388 - R 71 -9.8 -3.15996 | opp_overlap 3546386 3546385, overlap 3546386 TATTACGCACTAACA GGGGCG GCATCG CGCCCC AGATTTAATGAATAA asd 3547527 - 3546424 - | aspartate-semialdehyde dehydrogenase yhgN 3547719 - 3548312 + | dITP- and XTP- hydrolyzing protein TERM 4484 3548360 - 3548335 - T 88 -12.6 -3.63922 | overlap 3548333 AGTTTTTCGAAAAGA GCCCGGTAGC GTCACA ACTACCGGGC GAACAAACTTAACTC gntU 3549646 - 3548369 - | low affinity gluconate transporter TERM 4485 3549684 - 3549656 - R 71 -3.9 -4.77036 | overlap 3549658 3549659 CTTCATGACTAAAAA CAGCAGCAG TAAAACAGACC CTACTGCTG TTAAAACAAGCGTTA gntK 3550240 - 3549713 - | gluconate kinase 1 TERM 4486 3550298 - 3550272 - R 72 -3 -5.01845 | opp_overlap 3550272 TACAAGAATTAAAAA TGTTACGGGTAA CTG TTATCGGCAACA TTGTCCAGCCGGACA gntR 3551317 - 3550379 - | regulator of gluconate (gnt) operon TERM 4487 3551103 - 3551115 + g 76 -9.1 -3.75629 | opp_overlap 3551098 GTCTGATAACCGTGC GCGTC GGT GACGC TTTCGATTCCGCGTA TERM 4488 3551548 - 3551517 - R 100 -13.6 -4.10429 | overlap 3551507 AACGACGCGGCAAAA CCCCGGAAGCGTGC ATCA GCACGCGACCGGAG CGAGCGAGGAAGCCT yhhW 3552293 - 3551598 - | hypothetical protein yhhX 3553453 - 3552416 - | putative dehydrogenase TERM 4489 3553595 - 3553579 - H 100 -9.4 -6.21477 | AAGATCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAATACTGGAA yhhY 3553786 - 3554274 + | putative acetyltransferase YhhY ggt 3556075 - 3554333 - | gamma-glutamyltranspeptidase periplasmic precursor TERM 4490 3554923 - 3554962 + g 82 -3.4 -5.22312 | gap 1 GATTACTCTCATAAG GCGCAAGCTTGCCAGGGCG AAT CTCACTGGACGGCTT-CGC TTTTTTGATATCAAT TERM 4491 3555581 - 3555593 + g 71 -9.1 -3.51934 | overlap 3555579 CACGACTTTGTTCAG CGGCA TGG TGCCG TATTTATCCAGCGCC TERM 4492 3556049 - 3556066 + g 90 -9.1 -4.51699 | opp_overlap 3556033 AGCAGCAATGGCCAC CCGGCGT AAAA ACGTCGG TTTTATCATCGTTAT TERM 4493 3556217 - 3556230 + G 72 -8.1 -3.95219 | overlap 3556227 GACTTCTGATTCTTA CGGCA CTCC TGCCG TTTGTCGGCTTTGCA TERM 4494 3556602 - 3556569 - g 81 -9.5 -4.0162 | GCCGGAGAGGAGAAA CGGCGACATGCTGAA TCAG CCCAGCACGCCGCAG CCTGACATTCCGTTG yhhA 3556195 - 3556635 + | hypothetical protein ugpQ 3557365 - 3556622 - | cytoplasmic glycerophosphodiester phosphodiesterase TERM 4495 3556683 - 3556714 + g 78 -8.6 -4.17556 | gap 1, opp_overlap 3556681 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GCCGC-GTGCTGGGG TTTATTGACGGTATA SF3467 3558324 - 3559532 + | iso-IS10R ORF ugpE 3560537 - 3559692 - | glycerol-3-phosphate transporter membrane protein ugpA 3561421 - 3560534 - | glycerol-3-phosphate transporter permease ugpB 3562835 - 3561519 - | glycerol-3-phosphate transporter periplasmic binding protein TERM 4496 3561917 - 3561930 + g 72 -5.9 -4.38154 | overlap 3561928 CCCACAGGCTGGCTC CGCCG ATAA TGGCG TTTTGTGGCGCATCT TERM 4497 3562863 - 3562876 + r 70 -5.2 -4.46212 | opp_overlap 3562861 3562873, overlap 3562862 TTGTTGTACCGAATG CGCG AATTCA CGCG TTTTATGCTCGCGGG TERM 4498 3563198 - 3563213 + r 70 -9 -3.35996 | opp_overlap 3563198, overlap 3563190 3563192 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG TERM 4499 3563213 - 3563198 - R 72 -9 -3.53811 | opp_overlap 3563190 3563192 3563198 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG livF 3563945 - 3563232 - | leucine/isoleucine/valine transporter ATP-binding subunit TERM 4500 3563494 - 3563476 - G 70 -4.5 -4.51994 | TCAAGTAACAACAAA CGCGGAT TGCTC ATCAGCG CGCGACCAATCGCCA livG 3564714 - 3563947 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 3565988 - 3564711 - | leucine/isoleucine/valine transporter permease subunit livH 3566911 - 3565985 - | branched-chain amino acid transporter permease subunit LivH TERM 4501 3566792 - 3566776 - G 83 -10.1 -4.1347 | opp_overlap 3566776 TGCCAATCATATAAA CCTCGCC GTG GGCGAAG TTGATCATGCCGATA TERM 4502 3566951 - 3566929 - R 82 -11.2 -3.55622 | overlap 3566930 GGTAACCTTTCTAAA CCCGCCCGCA TTT TACGGGCGGT GGGATGATCACTTGG TERM 4503 3566950 - 3566930 - R 86 -14.7 -2.73159 | overlap 3566929 GTAACCTTTCTAAAC CCGCCCGCA TTT TACGGGCGG TGGGATGATCACTTG livK 3568068 - 3566959 - | high-affinity leucine-specific transport protein, periplasmic binding protein TERM 4504 3568436 - 3568426 - H 95 -3.2 -5.88476 | AAAAGAAATAAAAAA GAGA AAG CCTC CGATTAAATTATTTC yhhK 3568492 - 3568875 + | hypothetical protein livJ 3570234 - 3569074 - | high-affinity amino acid transport protein, periplasmic binding protein TERM 4505 3569905 - 3569916 + g 70 -5.8 -4.15044 | CACATATTTAATGCC GTCG TTAA CGAC TTTGTTCGCCACCGC TERM 4506 3570426 - 3570407 - R 100 -7.8 -5.75538 | opp_overlap 3570407 CCCAAAAAACAAAAA CCCCGGAC TCTC ATCCAGGG TTCTCTGCTTAATAG rpoH 3571302 - 3570448 - | RNA polymerase factor sigma-32 ftsX 3572605 - 3571547 - | cell division protein FtsX TERM 4507 3572231 - 3572253 + g 77 -3.3 -5.03314 | gap 1 CTGTGCCACCACGCC CGCAGCGGCG TCAT CGTC-CAGCG TTTTTTGCAAGTAAA ftsE 3573266 - 3572598 - | cell division protein FtsE ftsY 3574765 - 3573269 - | cell division protein FtsY TERM 4508 3574937 - 3574924 - g 87 -4.5 -5.1861 | TTTATCATGAAAAAA CCGAA TCAT TCCGG CAGCGGCCAAATCCG yhhF 3574915 - 3575511 + | 16S rRNA m(2)G966-methyltransferase TERM 4509 3575692 - 3575723 + G 80 -11.7 -3.39018 | opp_overlap 3575688, overlap 3575689 CCCGCAGATGACCAC CGCCGAAAAGG TGCGGATTTT CCTTTTCGGCG TGTTTGAACTGCTGG yhhL 3575501 - 3575770 + | hypothetical protein TERM 4510 3575794 - 3575768 - T 75 -3.1 -5.22039 | overlap 3575755 TTTAAAGTTAAAAAA TAACCTTATTG TTCGC CAACAAAGCTA ACAAAGCGCGTTCCT yhhM 3576132 - 3575773 - | putative receptor TERM 4511 3576504 - 3576518 + G 71 -3.4 -4.8048 | overlap 3576505 3576506 CGTCAACGTCTGATG TACGCC ATC GGCGCG TTTTTCCTCTCGCAC yhhN 3576273 - 3576899 + | putative enzyme TERM 4512 3576910 - 3576929 + F 80 -12.2 -3.01984 | opp_overlap 3576906 3576905 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA TERM 4513 3577706 - 3577685 - g 83 -10.1 -4.13654 | CGCTGAAACCAGAAA CCGCCACGC GCCT GCGTAACGG TGAGCGGGAAGAGGT zntA 3576973 - 3579171 + | zinc/cadmium/mercury/lead-transporting ATPase TERM 4514 3579203 - 3579178 - T 74 -8.3 -3.83724 | AGGAGATAAGGCAAA CCGATCGCA ACATTGAG CGCGATCGG TCCCCTCGCCCCTCT yhhP 3579518 - 3579273 - | cell developmental protein SirA TERM 4515 3579373 - 3579357 - G 70 -4.3 -4.52803 | CATAAAGGTACAAAA CCCAGGA ATA TCGCGGG TAGTGGCCGGATCGT TERM 4516 3580191 - 3580209 + G 95 -6.6 -5.1963 | overlap 3580192 CACACTGTTCGGTAA CGTCAGCG ACA CGCTGGCC TTTTTCTTCATTGCC TERM 4517 3580192 - 3580208 + G 77 -10.1 -3.70694 | overlap 3580191 ACACTGTTCGGTAAC GTCAGCG ACA CGCTGGC CTTTTTCTTCATTGC yhhQ 3579739 - 3580404 + | hypothetical protein SF3490 3580477 - 3581034 + | hypothetical protein TERM 4518 3581052 - 3581079 + T 100 -13.4 -5.52384 | opp_overlap 3581047 TTTAAGATGATGAGG CGGCCTCAGGGA CGTG TTCCGGAGGCCG TTTTTTTAATCGCCA yhhS 3582255 - 3581038 - | hypothetical protein TERM 4519 3582801 - 3582785 - g 75 -5.1 -4.60041 | ATGGACTCGGAAAAA GTGGTTA CCT TCACCAC AGCGCTAATGACCGG yhhT 3582389 - 3583438 + | hypothetical protein TERM 4520 3583718 - 3583686 - g 82 -11.3 -3.53224 | opp_overlap 3583676 3583713, overlap 3583707 CATTCGCGCCGGAAA CGCCGCTATGGTTCA ACT TAAGCCATAGCGGTG ACGATATCGCTCTGC yhhU 3583493 - 3584080 + | holo-(acyl carrier protein) synthase 2 nikA 3584191 - 3585765 + | periplasmic binding protein for nickel TERM 4521 3585811 - 3585831 + G 90 -7.5 -4.93296 | overlap 3585814 TGCTGATCCCGATGG TGCTCGCCG CCT CGGTGATCA TTTTTCTGATGCTGC nikB 3585765 - 3586709 + | nickel transporter permease NikB nikC 3586706 - 3587539 + | nickel transporter permease NikC nikD 3587539 - 3588303 + | nickel transporter ATP-binding protein nikE 3588300 - 3589106 + | nickel transporter ATP-binding protein yhhG 3589112 - 3589513 + | nickel responsive regulator TERM 4522 3589583 - 3589540 - T 76 -4.2 -5.03713 | gap 1, opp_overlap 3589548 3589553, overlap 3589542 3589548 AACAAGGAAAGAAAA GATATTAACTGAACTTAATTT ATA AAATTAAGTTCAGTTG-CATA GATAGATCCTGTAAA TERM 4523 3589583 - 3589542 - T 83 -9.9 -4.11369 | gap 1, opp_overlap 3589548 3589553, overlap 3589540 3589548 CAAGGAAAGAAAAGA TAT-TAACTGAACTTAATTT ATA AAATTAAGTTCAGTTGCATA GATAGATCCTGTAAA TERM 4524 3589548 - 3589576 + T 88 -14.9 -3.08133 | opp_overlap 3589540 3589542 3589548, overlap 3589553 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC TERM 4525 3589576 - 3589548 - T 95 -14.9 -3.48814 | opp_overlap 3589548 3589553, overlap 3589540 3589542 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC SF3500 3589992 - 3589633 - | hypothetical protein yhhJ 3591447 - 3590323 - | putative transporter TERM 4526 3590667 - 3590651 - G 70 -10.1 -3.24232 | overlap 3590649 3590647 GTGGTGGCAAACAGA CTGAGCG CCA CGCCCAG CATAAACAGCGGGAT yhiH 3594182 - 3591447 - | putative ATP-binding component of a transport system TERM 4527 3592959 - 3592937 - G 85 -11.3 -3.65351 | gap 1, overlap 3592919 3592916 CCACCGCCAGCGAAA GCCGCT-GGC GAAT GCCGAGCGGC AATGACTCCGGCAGA yhiI 3595246 - 3594179 - | hypothetical protein TERM 4528 3594250 - 3594261 + g 72 -7.2 -4.1964 | GCACCCACGCTACGC CCGG TAAA CCGG TTTTGACATATTCCA TERM 4529 3595295 - 3595315 + r 74 -11.1 -2.80344 | opp_overlap 3595293 3595292, overlap 3595294 CGCGTGTTACAACTG CCGCCGAAC GAC GTTCAGCGG ATTCTTCCATCCGGG yhiJ 3597234 - 3595612 - | hypothetical protein TERM 4530 3595708 - 3595720 + g 71 -9.1 -3.52918 | overlap 3595704 AGTGGTTATCTCTGG CCCTG CAC CAGGG TTAATTTGGCAATTA SF3505 3599271 - 3597496 - | hypothetical protein TERM 4531 3598270 - 3598294 + g 91 -8.1 -5.08178 | opp_overlap 3598273 CATGTCTCTCGTATT TAATAAATTGT AGA GCAATTTATTA TTTTTATGTATGTAT TERM 4532 3600515 - 3600541 + r 91 -8.1 -5.03145 | opp_overlap 3600514 AAAATTTACATAATC CCAGCGTTA TTCATATCT TAACGCTGG TTTTTTACGAACTTA SF3507 3601103 - 3600588 - | hypothetical protein SF3508 3601821 - 3601057 - | hypothetical protein TERM 4533 3602484 - 3602464 - g 70 -4 -4.6008 | overlap 3602455 3602465 AAAATATAATGAAAA CGATGACA CCTAT CGTCATCA TTACTGGGCATCACT SF3509 3602067 - 3602828 + | hypothetical protein TERM 4534 3602911 - 3602891 - T 100 -12.6 -5.1925 | TTATAAGTTAAAAAA GGCGGGAT ATCAA ATCCCGCC ATGAAATTAACTAAT SF3510 3603447 - 3602935 - | hypothetical protein TERM 4535 3603421 - 3603407 - G 72 -5.6 -4.48987 | opp_overlap 3603406 GCCTGAGAAGCAAAA GCTGTC CCC GCCAGC ATGATTGCCAACAAT TERM 4536 3603476 - 3603488 + r 84 -7.7 -4.7923 | TGATTTTCATTTACA CTGCA AAA TGCAG TTTCTTTCTTTGCAT TERM 4537 3603581 - 3603559 - R 76 -5 -4.84761 | overlap 3603563 ACATCTTCACAAAAA TAAATTATGA GTT TCTTAATTTA GAAACTATAAACATG TERM 4538 3603591 - 3603563 - R 72 -2.7 -4.96501 | gap 1, overlap 3603559 CTTCACAAAAATAAA TTATGAGTTTCT TAATTT AGAAACT-ATAA ACATGTCGCCGCTAT SF3511 3604734 - 3603586 - | hypothetical protein SF3512 3604826 - 3605191 + | insertion sequence 2 OrfA protein SF3514 3606866 - 3605979 - | putative outer membrane pore protein SF3513 3605149 - 3606054 + | insertion element IS2 transposase InsD TERM 4539 3606376 - 3606387 + gF 70 -5.8 -4.17789 | opp_overlap 3606376 GTTGCAGATAAACCA TGGC CATC GCCA TTTGCTTTGTAGTTG SF3515 3606887 - 3607171 + | hypothetical protein SF3516 3607228 - 3608040 + | hypothetical protein SF3517 3608683 - 3608360 - | putative IS1 encoded protein insB 3608758 - 3609261 + | IS1 ORF2 TERM 4540 3609315 - 3609291 - T 74 -7.1 -4.30933 | CATAAACGCAATAAA TCCGTCTCC CAGCTGC GGTGACGGA ATATAAAGCCCACGA TERM 4541 3609873 - 3609852 - T 85 -13.7 -3.07233 | opp_overlap 3609851 3609854, overlap 3609843 3609854 GCATAACGCTGAAGA GAGCGCCGC CGTA GCGACGCTC GTTACCTCACACCGA TERM 4542 3609871 - 3609854 - T 73 -10.5 -3.09135 | opp_overlap 3609854 3609851, overlap 3609843 3609852 ATAACGCTGAAGAGA GCGCCGC CGTA GCGACGC TCGTTACCTCACACC yhdW 3610807 - 3609890 - | putative periplasmic binding transport protein TERM 4543 3610950 - 3610966 + r 87 -9.5 -4.27259 | opp_overlap 3610952, overlap 3610942 AAATTATCGTTATAG GACGTTT GGG AAACGTC TTTTACCTGTCTGTG SF3521 3611270 - 3610944 - | putative IS1 encoded protein insB 3611345 - 3611848 + | IS1 ORF2 yhiN 3613265 - 3612066 - | hypothetical protein TERM 4544 3614116 - 3614097 - g 70 -4.2 -4.65933 | overlap 3614093 GAGCGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 3613497 - 3614996 + | low-affinity phosphate transport protein TERM 4545 3615036 - 3615015 - T 77 -11.5 -3.14218 | opp_overlap 3615015, overlap 3615013 3615012 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATACGTTA TERM 4546 3615015 - 3615036 + T 100 -13.7 -5.66684 | opp_overlap 3615015 3615013 3615012 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATACGTTA yhiO 3615402 - 3615067 - | universal stress protein UspB uspA 3615796 - 3616230 + | universal stress protein TERM 4547 3616257 - 3616274 + T 100 -14.1 -4.77757 | CGACGTGTTCCTGAA CGCCCGC ATAT GCGGGCG TTTTGCTTTTTGGCG TERM 4548 3618058 - 3618033 - T 100 -19.1 -3.86346 | opp_overlap 3618033 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACTG TERM 4549 3618033 - 3618058 + T 100 -19.1 -4.20806 | opp_overlap 3618033 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACTG yhiQ 3618818 - 3618066 - | putative methyltransferase TERM 4550 3618677 - 3618654 - G 70 -4.6 -4.49531 | gap 1 AACAAAATCAACAAA GATGCCGCCAA GTT TTGGCT-CATC ACGCTTGCGCAATTC TERM 4551 3618772 - 3618793 + g 88 -11.5 -3.794 | opp_overlap 3618774, overlap 3618774 GCCGCCAGAACAGAT AAGGCGCCG TCTC CGGCGCCTG TTTCATCAATTAAGC TERM 4552 3618774 - 3618791 + g 95 -14.1 -3.48105 | opp_overlap 3618774, overlap 3618772 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA TERM 4553 3618791 - 3618774 - G 100 -14.1 -3.72788 | opp_overlap 3618772 3618774 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA prlC 3620868 - 3618826 - | oligopeptidase A TERM 4554 3618910 - 3618932 + g 74 -10.6 -3.21276 | opp_overlap 3618899, overlap 3618909 CAGATCCATCGGCTC TTCTGAACCG CCA CGGCTCAGAA TGTTGTCGAGGAACG TERM 4555 3619989 - 3619999 + g 70 -4.6 -4.46581 | opp_overlap 3619983, overlap 3619983 TTAAGAAATCCAGCA CCTG CTG CGGG TTTTCTGCCATTTTA TERM 4556 3621592 - 3621582 - g 75 -5.4 -4.58773 | CGTATGAAATGAAAA CTGA CTA TCAG GCGGTGGTCAGCGGG yhiR 3621071 - 3621913 + | hypothetical protein gor 3621985 - 3623337 + | glutathione reductase TERM 4557 3623346 - 3623372 + T 100 -16 -3.43217 | opp_overlap 3623346, overlap 3623339 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG TERM 4558 3623372 - 3623346 - T 100 -13.8 -3.71649 | opp_overlap 3623346 3623339 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG TERM 4559 3623833 - 3623801 - T 100 -16.6 -3.01791 | opp_overlap 3623810, overlap 3623810 ACTCTGGGCTGAAGA GTAAAAAAACCGAC GCGAA GTCGGTTTTTTTAC GTCCGGATTCGGACA TERM 4560 3623810 - 3623824 + T 91 -7.1 -5.47218 | opp_overlap 3623801 3623810 TGAAGAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACGTCCGG TERM 4561 3623824 - 3623810 - T 93 -7.1 -5.63374 | opp_overlap 3623810, overlap 3623801 TGAAGAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACGTCCGG TERM 4562 3624066 - 3624035 - T 70 -9.7 -3.0464 | gap 1, opp_overlap 3624043, overlap 3624043 AACTCAGGCTGAAGA GTAAAAAA-CCGAC GCAAA GTCGGTTTTTTTAC GTCCTGATTCAAACC TERM 4563 3624043 - 3624057 + T 91 -7.1 -5.48825 | opp_overlap 3624035 3624043 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG TERM 4564 3624057 - 3624043 - T 90 -7.1 -5.27779 | opp_overlap 3624043, overlap 3624035 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG insB 3624645 - 3624250 - | IS1 ORF2 insA 3624947 - 3624672 - | IS1 ORF1 SF3534 3624989 - 3625534 + | hypothetical protein TERM 4565 3625607 - 3625622 + GF 90 -6.8 -5.08824 | TATCATCAGCCTGCT GCTGGA TGAG TCCGGC TTTTTTGAATGGGCA TERM 4566 3625703 - 3625724 + GF 73 -9.3 -3.58343 | CTGGATTGTCCTGCT CGGTGCCGC CGTT GCGGCCCTG TTTGCCAATGATGGC TERM 4567 3626358 - 3626345 - gf 71 -9.5 -3.28712 | CGTGCTGGCGGATAA CGGCC TGTG GGCCG CGACGCTCGGCACCG arsB 3625401 - 3626690 + | arsenical pump membrane protein arsC 3626703 - 3627128 + | arsenate reductase insB 3627478 - 3627981 + | IS1 ORF2 SF3538 3628012 - 3628968 + | hypothetical protein TERM 4568 3629163 - 3629135 - f 74 -11.1 -2.77503 | opp_overlap 3629132 3629131 3629129, overlap 3629125 3629132 ATAACCACGTAATCA TGCTTCTCTGACA TTT TATCGGAGAAGCA ATGACTCTTTGTCTC TERM 4569 3630365 - 3630379 + G 70 -5 -4.50943 | opp_overlap 3630365 CAACATCTTGACAAA CAAATC AAT GGTTTG TTTTCTACATTGTTA SF3539 3629549 - 3630772 + | hypothetical protein TERM 4570 3631502 - 3631536 + G 74 -10.6 -3.14564 | TGGGATTACGGCTAT GGTGCATTCTGGCCGG AAC CGGGCTGGGGTGCGCC TTACTACACCAATGC slp 3630986 - 3631585 + | outer membrane protein induced after carbon starvation TERM 4571 3631596 - 3631626 + F 80 -12.7 -3.10522 | opp_overlap 3631589 3631597, overlap 3631599 AATAACACCACCGAA AGATGCAGATGCT TTCTC AGCATCTGCATCA TGTATTACATAAAAT TERM 4572 3631625 - 3631597 - f 100 -16.2 -3.72009 | opp_overlap 3631596 3631599, overlap 3631589 ATAACACCACCGAAA GATGCAGATGCT TTCTC AGCATCTGCATC ATGTATTACATAAAA TERM 4573 3631599 - 3631623 + F 82 -13 -2.76322 | opp_overlap 3631589 3631597, overlap 3631596 AACACCACCGAAAGA TGCAGATGCT TTCTC AGCATCTGCA TCATGTATTACATAA yhiF 3631741 - 3632271 + | hypothetical protein TERM 4574 3632975 - 3633005 + T 100 -12.6 -4.93968 | opp_overlap 3632975 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT TERM 4575 3633005 - 3632975 - T 100 -14.8 -4.93595 | opp_overlap 3632975 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT hdeB 3633361 - 3633023 - | acid-resistance protein TERM 4576 3633428 - 3633381 - R 73 -10.8 -3.00259 | gap 1, opp_overlap 3633385, overlap 3633385 TATAGAGATTATATA TGAACAGG-AGGAATAGCTGCTT TTA AAGAAGATATTCCGGCCTGTTCA ATATGCAAGGAAGTA hdeA 3633797 - 3633465 - | acid-resistance protein TERM 4577 3633647 - 3633634 - G 72 -6.7 -4.25283 | AGCGCTTCAGCAAAA CCAAC TGCA GTTGG CTGGAAGGATTCGTC hdeD 3634052 - 3634624 + | acid-resistance membrane protein TERM 4578 3634641 - 3634675 + F 100 -15.9 -3.26545 | opp_overlap 3634628 3634651, overlap 3634642 TACCCCGGTTGTCAC CCGGATCATAGTCAC TTGAT GTGACTATGATCCGA TTAATACTCTCTCCG TERM 4579 3634642 - 3634674 + F 100 -19.4 -2.55606 | opp_overlap 3634628 3634651, overlap 3634641 ACCCCGGTTGTCACC CGGATCATAGTCAC TTGAT GTGACTATGATCCG ATTAATACTCTCTCC TERM 4580 3635070 - 3635050 - f 100 -14.1 -4.65263 | opp_overlap 3635050 ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC TTAAGTCGAAACAAG TERM 4581 3635050 - 3635070 + F 85 -14.1 -3.05384 | opp_overlap 3635050 ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC TTAAGTCGAAACAAG yhiE 3635423 - 3635950 + | hypothetical protein TERM 4582 3636113 - 3636131 + T 95 -3.1 -6.02345 | overlap 3636090 AATGCTGGCAGGAAC TGTTGGC AGAAC GGCAACA TTTTTTTTGTCGTTG TERM 4583 3636379 - 3636362 - T 70 -9.8 -2.97475 | overlap 3636361 CCTGCGATGACAAAT CGGCGG AAAACG CCGCCG CCATGACGCCTGAGG TERM 4584 3636535 - 3636516 - T 70 -9.4 -3.31415 | TATCATTAAACGCAA CTTTATCG AAGG CGATAAAG TGAACCAGGGCGATT TERM 4585 3636642 - 3636604 - T 75 -9.6 -3.56594 | gap 1, overlap 3636595 3636594 CTAAACTCCGCCAAA GGC-TCGCTGGCGAAAG CGCTCT CTACCGCCAGCAATGCC CGCATCACCTTTAAC insB 3637742 - 3637347 - | IS1 ORF2 insA 3638044 - 3637769 - | IS1 ORF1 TERM 4586 3639922 - 3639936 + G 74 -7.8 -4.06001 | opp_overlap 3639922, overlap 3639924 3639927 GTTTGGCTGGACTAA CGGTGT GGT ACGCCG TTTAATTGGTTTGTA treF 3638315 - 3639964 + | trehalase TERM 4587 3640008 - 3639965 - T 82 -11.2 -3.51329 | opp_overlap 3639968, overlap 3639968 3640006 TACGGCGAACCATAA TATTTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAATTA TCCTCTTCAGGAGGA TERM 4588 3640005 - 3639968 - T 81 -12.9 -2.59447 | opp_overlap 3639968, overlap 3639965 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA TERM 4589 3639968 - 3640005 + T 90 -12.9 -3.52073 | opp_overlap 3639968 3639965 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA TERM 4590 3640101 - 3640076 - T 72 -9.1 -3.61398 | opp_overlap 3640076 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 4591 3640076 - 3640101 + T 100 -9.8 -5.61596 | opp_overlap 3640076 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 4592 3641447 - 3641418 - T 89 -9.3 -4.59109 | opp_overlap 3641419 3641420, overlap 3641420 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTTCAGGAGGAGA TERM 4593 3641419 - 3641446 + T 85 -12.8 -3.33696 | opp_overlap 3641418 3641420, overlap 3641420 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTTCAGGAGGAG TERM 4594 3641420 - 3641445 + T 90 -16.3 -2.60075 | opp_overlap 3641418 3641420, overlap 3641419 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTTCAGGAGGA TERM 4595 3641445 - 3641420 - T 100 -16.3 -3.90762 | opp_overlap 3641420 3641419, overlap 3641418 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTTCAGGAGGA yhjB 3642054 - 3641452 - | putative regulator TERM 4596 3642610 - 3642644 + G 72 -4.8 -4.62772 | opp_overlap 3642610 3642611, overlap 3642611 3642612 CAGTTGTTCATCAAA GTCGCGGAGCTGGAAA GTT TTTCCCGCGCGGCGGA TTTCTTTGCTTTGCC yhjC 3642502 - 3643473 + | putative transcriptional regulator LYSR-type yhjD 3643522 - 3644535 + | hypothetical protein TERM 4597 3644537 - 3644574 + F 71 -10.5 -2.62512 | opp_overlap 3644529 3644538 3644541, overlap 3644536 3644535 3644550 AAACGCAGCCTTAAA ATAGGCCGGATGCGGCG TAAA CGCCTTATCCGGCATAC GATTTTATTCGGCCT TERM 4598 3644573 - 3644538 - f 95 -11.8 -4.1196 | opp_overlap 3644537 3644536 3644535 3644550, overlap 3644529 3644541 AACGCAGCCTTAAAA TAGGCCGGATGCGGCG TAAA CGCCTTATCCGGCATA CGATTTTATTCGGCC TERM 4599 3644570 - 3644541 - f 82 -13.5 -2.79004 | opp_overlap 3644537 3644536 3644535 3644550, overlap 3644529 3644538 GCAGCCTTAAAATAG GCCGGATGCGGCG TAAA CGCCTTATCCGGC ATACGATTTTATTCG TERM 4600 3644602 - 3644633 + F 82 -13 -2.78596 | opp_overlap 3644611 3644613 CCTGGCTCCCCGTAG GCCGGATAAGATGC GCCA GCATCGCATCCGGC TATAATGCGCACATA TERM 4601 3645027 - 3645047 + G 79 -9.7 -3.73106 | GTCCTTGTCGCCTCT CTCATTGGC ACG GCCATTGAG TTCTTCGACTTTTAC TERM 4602 3645182 - 3645192 + G 75 -4.6 -4.86773 | CGTCGCGCGCCCCAT TGGC TCT GCCG TTTTTGGTCATTTTG TERM 4603 3645537 - 3645548 + G 70 -5.8 -4.27117 | TTTATGAGCTGGGGC TGGC GTGT GCCA TTTATCTTCTCGGCG TERM 4604 3645924 - 3645904 - g 91 -11.9 -4.07568 | opp_overlap 3645908 3645910 TTGGTCGCCGTAAAA GCATGGTGA TCA TCACCACGC TGATCATCCTGTTCG yhjE 3644946 - 3646268 + | putative transport protein TERM 4605 3646450 - 3646411 - T 73 -10.2 -2.9916 | gap 1, opp_overlap 3646411 3646419, overlap 3646410 GCCAAAAATCTAAAT CTGTTTAATTGCCGGATGT CAG ACATCCGGCAATTAT-CAT CACTTCTTCATCTGC TERM 4606 3646419 - 3646443 + T 100 -17.3 -3.45434 | opp_overlap 3646411 3646410, overlap 3646411 TCTAAATCTGTTTAA TTGCCGGATGT CAG ACATCCGGCAA TTATCATCACTTCTT yhjG 3648510 - 3646450 - | hypothetical protein TERM 4607 3648450 - 3648428 - G 72 -7 -4.1899 | overlap 3648441 CGATTCCAGTCAAAA GTTGCAATCA AAA TGATCGCCAC GACAATCAACAACAA yhjH 3649347 - 3648580 - | EAL domain-containing protein TERM 4608 3650357 - 3650344 - g 82 -3.1 -5.27335 | CTGCCGAAAGAAAAA GTGAT CGAT ACCAC CGCAGCTGGCGACTC kdgK 3649360 - 3650508 + | ketodeoxygluconokinase TERM 4609 3650557 - 3650526 - T 76 -8 -4.24948 | overlap 3650527 GCAGCATATGCAAAA GGCTGGATAAAGTG TTAC CCCTCTATCCAGCT CATCCATAAATACCT TERM 4610 3650556 - 3650527 - T 77 -11.5 -3.14487 | overlap 3650526 CAGCATATGCAAAAG GCTGGATAAAGTG TTAC CCCTCTATCCAGC TCATCCATAAATACC yhjJ 3652100 - 3650604 - | hypothetical protein TERM 4611 3652154 - 3652137 - R 93 -6.9 -5.7946 | CTGGTAATAAAAAAA CTGCCCG TTGT CGGTCAG TCTAAATGACGTTAA TERM 4612 3652255 - 3652227 - R 100 -14 -4.52669 | opp_overlap 3652234 AAGAAGTGAAATAAA CCTGAACTCACC CAGGT GGTAAGTTCAGG CACAGGGGTCAATTA TERM 4613 3652308 - 3652279 - R 72 -9.3 -3.59315 | overlap 3652281 TCAATTATGCGCAAA CACCCGCACTC GGGGAAGG GAGTGCGGGCA TAAGTGGTGAGATTA TERM 4614 3652306 - 3652281 - R 82 -11.9 -3.37259 | overlap 3652279 AATTATGCGCAAACA CCCGCACTC GGGGAAGG GAGTGCGGG CATAAGTGGTGAGAT dctA 3653607 - 3652321 - | C4-dicarboxylate transporter DctA TERM 4615 3653385 - 3653373 - G 74 -7.7 -4.08317 | opp_overlap 3653384 CAATTTCAAAGTAAA GCAGT GCG ACTGC GCCGGTACGACCGAC TERM 4616 3653755 - 3653734 - R 73 -4.4 -4.7657 | opp_overlap 3653738 3653740 CAAAAAGGTTAAAAA GTTTGAGC TGGCTC GCACAAAC CAGCACTTTTTAAAG yhjK 3655742 - 3653793 - | putative phosphodiesterase TERM 4617 3658007 - 3658028 + r 73 -4.4 -4.83615 | gap 1, opp_overlap 3658007 GCTGGCTGGCAGAGA GC-GAGGCG ATAAA CGCTTCAGC TTTTTCTGGCGACTG TERM 4618 3658094 - 3658116 + r 79 -12 -3.22298 | TAGTGTTGCCGCTGT CCATCCGCAG GGT CTGCTGATGG TTGGTGCTGCCTCGA TERM 4619 3658339 - 3658351 + r 74 -6.9 -4.36914 | opp_overlap 3658313, overlap 3658316 3658320 CTGGCGCTGAACTGC CTGCG CAT CGCGG TTTTGTAAAAAAGGC yhjN 3661596 - 3659287 - | cellulose synthase regulator protein TERM 4620 3663944 - 3663954 + r 72 -8.2 -3.671 | opp_overlap 3663942, overlap 3663943 3663950 CAGACCTGAAAATGC CCGC TGC GCGG TTTCGGCGTTTCTTT TERM 4621 3663950 - 3663962 + r 70 -4.7 -4.42062 | opp_overlap 3663942, overlap 3663943 3663944 TGAAAATGCCCGCTG CGCGG TTT CGGCG TTTCTTTGCGCGATG TERM 4622 3664035 - 3664017 - R 71 -10.2 -2.64765 | overlap 3664013 GAATGAGATAACGGA CCGGGTCC AGC GGACGCGG ACGCGAGGCGTTGAT yhjQ 3665003 - 3664251 - | cell division protein insB 3665572 - 3665177 - | IS1 ORF2 insA 3665874 - 3665599 - | IS1 ORF1 yhjS 3666072 - 3667643 + | putative protease yhjT 3667640 - 3667831 + | hypothetical protein TERM 4623 3668805 - 3668819 + G 74 -2.7 -5.00884 | opp_overlap 3668805 GATGATGGGACATAA CGGCC AGTTC GGCGG TTTTTTGAAAGAAGT yhjU 3667828 - 3669507 + | hypothetical protein TERM 4624 3669543 - 3669518 - T 100 -16.2 -4.81685 | AGTAAGCACGAAAAA GGCCGCAGAG TTTAAC CTCTGCGGCC TGATCCGGGCGCAAA SF3571 3669869 - 3669594 - | hypothetical protein TERM 4625 3669768 - 3669809 + g 100 -13.2 -4.60797 | gap 2, opp_overlap 3669767 TGGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 4626 3669972 - 3669984 + r 83 -6.3 -5.06414 | AGAATATTATCCGCG TGCAA TCG TTGCA TTTTTCTTACGAAAA TERM 4627 3670026 - 3670001 - R 100 -14 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCAC CCCTGCGGCC TGGTCCGGGCGCAAA SF3572 3670352 - 3670077 - | hypothetical protein TERM 4628 3670251 - 3670292 + g 100 -13.2 -4.60797 | gap 2, overlap 3670215 CAGGTTCAAGAATGG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 4629 3670455 - 3670467 + r 83 -6.3 -5.06414 | AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 4630 3670509 - 3670484 - R 100 -14 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCAC CCCTGCGGCC TGGTCCGGGCGCAAA SF3573 3670802 - 3670560 - | hypothetical protein TERM 4631 3670734 - 3670775 + g 100 -11 -4.60797 | gap 2, overlap 3670698 TGGATGCAAGAATGG CCCCCGTGGTGTTGTCAGGT GCAT ACCTG-CAACG-TGCGGGGG TTTTCTCTCTCCAGC TERM 4632 3670938 - 3670950 + H 83 -6.3 -5.06414 | AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 4633 3670992 - 3670967 - H 100 -14 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCAC CCCTGCGGCC TGGTCCGGGCGCAAA TERM 4634 3671217 - 3671258 + H 100 -13.2 -4.60797 | gap 2, opp_overlap 3671242 TAGGTTCAAGATTAG CCCCCGTTATGTTGTCAGGT ACAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC yhjV 3671626 - 3672897 + | putative transporter protein TERM 4635 3672899 - 3672917 + T 77 -7.3 -4.4715 | opp_overlap 3672899 AGCTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGTGAGTTAACG TERM 4636 3672917 - 3672899 - T 79 -9.5 -3.76402 | opp_overlap 3672899 AGCTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGTGAGTTAACG dppF 3673931 - 3672927 - | dipeptide transporter ATP-binding subunit dppD 3674911 - 3673928 - | dipeptide transporter ATP-binding subunit TERM 4637 3674812 - 3674861 + g 70 -10.7 -2.83403 | gap 1, overlap 3674811 3674854 CAATCCCGACCACTT CGCCCTGTTTTACGCTGTAG-CTG ATG CGGTCTACGGCGCGGAACGGTGCG CTTTCGTCGCCGAAA dppC 3675824 - 3674922 - | dipeptide transporter dppB 3676853 - 3675834 - | dipeptide transporter permease DppB dppA 3678768 - 3677161 - | dipeptide transport protein TERM 4638 3677912 - 3677928 + g 81 -9.5 -4.02424 | TTCAGCCCCGGCATT TCCATCA GGT TGATGGA TTTATCCTGCTTCAT TERM 4639 3679483 - 3679501 + r 83 -8.8 -4.25074 | opp_overlap 3679484, overlap 3679484 TACAAATGCAAAAAA ACCTGCTC GTT GAGCAGGC TTTTCGAATTTGGTC TERM 4640 3679484 - 3679500 + r 81 -12.3 -3.14321 | opp_overlap 3679484, overlap 3679483 ACAAATGCAAAAAAA CCTGCTC GTT GAGCAGG CTTTTCGAATTTGGT TERM 4641 3679500 - 3679484 - R 100 -12.3 -5.59564 | opp_overlap 3679484 3679483 ACAAATGCAAAAAAA CCTGCTC GTT GAGCAGG CTTTTCGAATTTGGT TERM 4642 3679544 - 3679562 + r 74 -10.2 -3.14211 | overlap 3679561 TTACTCGCCACTTCG TGGCTCGC CCT GCGGGCCG TTGCTGGCGCAACGT TERM 4643 3679561 - 3679576 + r 72 -9 -3.55368 | overlap 3679544 GCTCGCCCTGCGGGC CGTTGC TGGC GCAACG TTCTCTCGCTTCGCT TERM 4644 3679651 - 3679669 + r 100 -14.6 -4.25074 | opp_overlap 3679651 TGCAGATGCAAAAAA GCCTGCTC GTT GAGCAGGC TTTTCGAATTTGGTC TERM 4645 3679669 - 3679651 - R 100 -14.6 -5.1287 | opp_overlap 3679651 TGCAGATGCAAAAAA GCCTGCTC GTT GAGCAGGC TTTTCGAATTTGGTC yhjW 3681539 - 3679848 - | phosphoethanolamine transferase TERM 4646 3681778 - 3681761 - R 100 -12.7 -4.88129 | opp_overlap 3681759 3681758 AAAAAGCAGTAAAAA GGGCCAG TTAA CTGGCCC AAATTTTACGAGTCA yhjX 3683071 - 3681863 - | putative resistance protein TERM 4647 3683165 - 3683151 - R 78 -6.4 -4.56775 | overlap 3683152 ATGCTTGGGGAAAAA CGGCAT GAA ATGCCA TCAGAACGGAATGAA yhjY 3683998 - 3683300 - | putative lipase TERM 4648 3683590 - 3683560 - G 79 -12.6 -3.06133 | overlap 3683562 CAAGCCGGGAGTCAA CACGCCAGCCTAAG CTA CTCACGCTGGCATG CCATAACGGATCGGT TERM 4649 3684327 - 3684312 - g 83 -6.1 -5.00884 | ACCGTCCTCAAAAAA CGCGA AAACTA TCGCG CCTACTTTCATCAGT tag 3684156 - 3684719 + | 3-methyl-adenine DNA glycosylase I yiaC 3684716 - 3685156 + | hypothetical protein bisC 3687404 - 3685125 - | biotin sulfoxide reductase TERM 4650 3685219 - 3685241 + g 73 -11.3 -2.66695 | overlap 3685218 3685217 TTACCCGCACAGCCA TTCCCCAGC CGCGA GCTGGGGAG ATCTTTGGTCAGCAC TERM 4651 3686490 - 3686508 + g 70 -6 -4.2558 | overlap 3686492 CTGCATTCCCCAGCC TGCCATCA GCA TGGTGGTA TTTTGGTGGAAAATA TERM 4652 3686571 - 3686583 + g 81 -6.2 -4.74706 | overlap 3686569 ACCACAAATCTCTGC CGCC CATTC GGCG TTTTTCGCTATTCCG TERM 4653 3686779 - 3686808 + g 72 -4.3 -4.61231 | gap 1, opp_overlap 3686766 3686771 3686807, overlap 3686780 AAGAAATCGACGGTT TCCGATC-GCATTG GAT CAATGCAGATCAGC TTTTTCCCACTGTCA yiaD 3687645 - 3688271 + | putative outer membrane lipoprotein TERM 4654 3688281 - 3688308 + F 100 -14.3 -3.82481 | CTGTAATCCCTTTCA TGCCAGGTGAT GCAGAA ATCACCTGGCA TTCTTCAGTTTTCCT yiaE 3688375 - 3689349 + | 2-hydroxyacid dehydrogenase TERM 4655 3689371 - 3689389 + T 82 -7.4 -4.55446 | opp_overlap 3689371 ACTGCGTGAAGTAAA GCCCGA TAATCGC TCGGGC TTTTACTCTTTATTG TERM 4656 3689389 - 3689371 - T 71 -7.4 -3.90291 | opp_overlap 3689371 ACTGCGTGAAGTAAA GCCCGA TAATCGC TCGGGC TTTTACTCTTTATTG yiaF 3690229 - 3689399 - | hypothetical protein TERM 4657 3690860 - 3690879 + H 100 -13.6 -4.08692 | CTTTATTGCTGTTTA CGGTCCTG ATGA CAGGACCG TTTTCCAACCGATTA cspA 3691114 - 3691326 + | major cold shock protein TERM 4658 3691355 - 3691374 + T 100 -11.4 -6.32976 | opp_overlap 3691345 3691340 3691355 3691353 GCACAGAATCTAAGA TCCCTGCC ATTT GGCGGGGA TTTTTTTATTTTTTT TERM 4659 3691785 - 3691817 + T 100 -13.6 -4.55128 | opp_overlap 3691785 TACACGAGGCATATA GGTCTGATTCCGAT ATTCA ATTGGAGTCAGACC TTTTAATTTCAGGCT SF3590 3692618 - 3691767 - | IS150 ORF2 SF3591 3693283 - 3692615 - | IS150 ORF1(ORF A) TERM 4660 3692964 - 3692980 + g 76 -3.7 -4.92363 | GCACTAACGCCTTTA GGTTTGG GAA TTAAACC TTTTTCTCCATGTTT insB 3693358 - 3693861 + | IS1 ORF2 TERM 4661 3694798 - 3694775 - g 70 -3.8 -4.62471 | gap 1, overlap 3694778 GCTAAGCTGGAAAAA GATCCGCAGCT TAA AGC-GCAGTTC CTCGAAGTTTATCCG TERM 4662 3694932 - 3694918 - g 75 -7.1 -4.34402 | GCGTGGAGATGAAAA TGCGC TGACG GCGCA ACAGAAAAAAGGCTA yhjA 3693920 - 3695317 + | putative cytochrome C peroxidase TERM 4663 3695327 - 3695352 + F 100 -14.1 -5.08601 | opp_overlap 3695323 CAATAATTAATTTGA TCGCCCGAACA GGAA TGTTTGGGCGA TTTTTATTACGATAA gadA 3695528 - 3696928 + | glutamate decarboxylase isozyme TERM 4664 3696944 - 3696990 + F 86 -10.9 -3.72324 | opp_overlap 3696948, overlap 3696948 TAACATAACGTTGTA AAAACCGAATGCCCAGCCTTT AAAAA AACAGCTGGGCATTCGGTTGC TTATTAATCGCAATA TERM 4665 3696986 - 3696948 - f 100 -18.3 -4.60255 | opp_overlap 3696944 3696948 ATAACGTTGTAAAAA CCGAATGCCCAGCCTTT AAAAA AACAGCTGGGCATTCGG TTGCTTATTAATCGC TERM 4666 3696948 - 3696986 + F 100 -16.1 -3.56142 | opp_overlap 3696948, overlap 3696944 ATAACGTTGTAAAAA CCGAATGCCCAGCCTTT AAAAA AACAGCTGGGCATTCGG TTGCTTATTAATCGC yhiX 3697298 - 3698122 + | DNA-binding transcriptional regulator GadX TERM 4667 3698165 - 3698147 - f 100 -5.2 -6.06529 | CAGACATAAAAAAAA CCCGGC ATAGGGG ACCGGG AAGAGGATAGTCTGC yhiW 3698490 - 3699218 + | putative ARAC-type regulatory protein TERM 4668 3699290 - 3699303 + T 70 -9.5 -2.99057 | overlap 3699288 TCCCTGATGATTTCT GCCGG GCTA CCGGC TAGTTCTCTTTCGCA TERM 4669 3699536 - 3699569 + T 79 -12.6 -2.92667 | opp_overlap 3699536, overlap 3699533 3699538 ATGGTTAGCAGGAAA GAGTAAGGCTGAAC CTTCAC GTTCAACCTTACTC TCATTTACACGTTAC TERM 4670 3699569 - 3699536 - T 100 -14.8 -3.78953 | opp_overlap 3699533 3699536 3699538 ATGGTTAGCAGGAAA GAGTAAGGCTGAAC CTTCAC GTTCAACCTTACTC TCATTTACACGTTAC SF3597 3700525 - 3699581 - | acriflavine resistance protein SF3598 3702694 - 3700610 - | acriflavine resistance protein TERM 4671 3702048 - 3702059 + g 70 -5.8 -4.19577 | CCACCCAGTTGACCA CCAG AAAT CTGG TTGTTTTGCACCTTA TERM 4672 3703079 - 3703063 - H 77 -3.7 -5.10767 | CATTCAAGATAAAAA TGCTTGA TTA TTAAGCA ATCAGGAATGGGAGT TERM 4673 3703168 - 3703136 - H 72 -8.5 -3.70863 | overlap 3703138 CAGAGAGTATTGAAA TAGCTATCACCTAAC TTT ATCAGGCGATAGCTG GTAGATGATGTAGGT TERM 4674 3703166 - 3703138 - H 79 -11.1 -3.43109 | overlap 3703136 GAGAGTATTGAAATA GCTATCACCTAAC TTT ATCAGGCGATAGC TGGTAGATGATGTAG insA 3703236 - 3703511 + | IS1 ORF1 insB 3703538 - 3703933 + | IS1 ORF2 TERM 4675 3703955 - 3703972 + T 100 -12.7 -4.72272 | opp_overlap 3703955 GTCATTACCAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGGCG TERM 4676 3703972 - 3703955 - T 100 -12.7 -5.1861 | opp_overlap 3703955 GTCATTACCAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGGCG glyS 3706060 - 3703991 - | glycyl-tRNA synthetase subunit beta TERM 4677 3705501 - 3705491 - G 72 -8.2 -3.85698 | CGGTTCGCCCATAAA GCGG TGG CCGC GAATCACGCGATCGG glyQ 3706981 - 3706070 - | glycyl-tRNA synthetase subunit alpha TERM 4678 3706276 - 3706294 + g 70 -6.7 -4.12254 | gap 1 GCAGCGGATTTTCCA GCGCCAGC AGCT GCTG-CGC TTCTTTCTCGTACTG SF3604 3707375 - 3707076 - | hypothetical protein TERM 4679 3707182 - 3707200 + g 77 -3 -5.14563 | overlap 3707187 CTTCCCTGGAACTGT TCGAAGGC GGT GACGTCGA TTTTTTGCTCGCCGG TERM 4680 3707705 - 3707717 + G 71 -3.3 -4.84363 | TTCTGCCTCTCGTGT CAGCG TGC CGCTA TTTTTCATGATTTCC yiaH 3707550 - 3708545 + | hypothetical protein TERM 4681 3708577 - 3708552 - T 75 -6.1 -4.43477 | opp_overlap 3708552 GTGAGTTAAGTAAAA GCCCGTTCA CATTGGAC TGACCGGGC TTACGTGAATTATTC yiaA 3709024 - 3708587 - | hypothetical protein yiaB 3709411 - 3709070 - | hypothetical protein TERM 4682 3709136 - 3709118 - G 82 -2.4 -5.42131 | CAAGCAGACAAAAAA GGCGAT GGGGTAG ATCACC ATTTCATAAGCATTG xylB 3711034 - 3709580 - | xylulokinase TERM 4683 3710008 - 3709993 - G 77 -3.2 -5.04868 | opp_overlap 3709994, overlap 3709994 TCAAACCAAAGAAAA CCCC CTTCGCCT GGGG ATTATTGTGTGGTGT TERM 4684 3711084 - 3711056 - H 100 -9.6 -5.40072 | gap 1, opp_overlap 3711081, overlap 3711057 CGTTCCTTAAAAAAA TGCCCGG-TATCG CTAC CGATAACCGGGCC AACGGACTGCACAGT TERM 4685 3711083 - 3711057 - H 95 -13.1 -3.83561 | gap 1, opp_overlap 3711081, overlap 3711056 GTTCCTTAAAAAAAT GCCCGG-TATCG CTAC CGATAACCGGGC CAACGGACTGCACAG TERM 4686 3711971 - 3711988 + H 74 -8.3 -3.86822 | GGGTTCGTCGCCGCA CCCGCGC CATA GCGAGGG TTTGTAAAGCAGTTA xylF 3712794 - 3713786 + | D-xylose transporter subunit XylF TERM 4687 3713790 - 3713818 + F 95 -12.4 -4.0641 | opp_overlap 3713777 AGCGAGCTGTAAGCG TTACGCCCCGGC GCGGA GCGGGGGCGTGA TTTCTCTCCATGCCG TERM 4688 3715113 - 3715103 - g 85 -6.8 -4.81083 | GGCAATCAGCAAAAA GCGA TCC TCGC CCGCTGTCTGTTACT xylG 3713864 - 3715405 + | xylose transporter ATP-binding subunit xylH 3715383 - 3716564 + | putative xylose transporter, membrane component TERM 4689 3716581 - 3716612 + T 100 -12.4 -4.7078 | opp_overlap 3716588 TTTGATAAAAATTTT CTCAAAGCCGGTTA CGTA TTACCGGTTTTGAG TTTTTGCATGATTCA TERM 4690 3716953 - 3716971 + T 78 -6 -4.81249 | opp_overlap 3716953 3716968 TGCCACCGATAACTA TGCGCT GGTTGAA AGCGCA TTTTTGCATTTAAAA TERM 4691 3716989 - 3717009 + T 72 -3.2 -4.98436 | TTTGCATTTAAAAGA GAAAGGCG TTAAC CGCTTTGC TTTTTATGGTCTTCC TERM 4692 3717913 - 3717884 - T 87 -10.1 -4.26903 | CTGATGCGAGCAAAA GCCTTATCCGACC GACA AATCAGATAAGGC TCGAGGAAATGAAAT bax 3718752 - 3717928 - | hypothetical protein TERM 4693 3718509 - 3718519 + g 71 -2.4 -4.92777 | overlap 3718509 AAGGCATTACGGTCC GGAG AAA CGCC TTTTTCCTTGGTGTT TERM 4694 3719559 - 3719577 + G 72 -8.8 -3.80573 | opp_overlap 3719559 3719558 AAATAACGTTACAAC CCGCTGCT ACC AGCAACGG TTTACTCCTGCTGGA TERM 4695 3721027 - 3721045 + G 72 -6.6 -4.2461 | overlap 3721034 ACAAACGACACTTTC GCTGAAGC AGG GCTACGGC TTTGTTCGTGAGCAT malS 3719072 - 3721102 + | periplasmic alpha-amylase precursor TERM 4696 3722372 - 3722360 - g 71 -9.1 -3.54741 | TATCAGCGCCTGAAA GCACG CGG CGTGC TGATGGTGCCGGGGC avtA 3721280 - 3722533 + | valine--pyruvate transaminase TERM 4697 3722651 - 3722681 + T 72 -9.1 -3.53444 | gap 1, opp_overlap 3722648 3722647, overlap 3722651 CATAAACAAAGCGCA C-TATTCCGGCGTT GAGA AACGCCGGAAAACG TTTCAAACAGGCTGC yiaI 3723157 - 3722684 - | hypothetical protein yiaJ 3724107 - 3723259 - | putative regulator TERM 4698 3724305 - 3724293 - H 77 -3.3 -5.19261 | AAAGCGATCAAAAAA CAAGG AAG CCTAG GATGAAAGTGACATT yiaK 3724307 - 3725305 + | 2,3-diketo-L-gulonate reductase insA 3725520 - 3725795 + | IS1 ORF1 insB 3725822 - 3726217 + | IS1 ORF2 SF3623 3726551 - 3727843 + | hypothetical protein insA 3727877 - 3728152 + | IS1 ORF1 insB 3728179 - 3728574 + | IS1 ORF2 TERM 4699 3728707 - 3728695 - T 82 -7.7 -4.67478 | GAAATACAAAAATAA GCACT CCC AGTGC AAAATAGTCCAGGAA aldB 3730898 - 3729270 - | aldehyde dehydrogenase B (lactaldehyde dehydrogenase) TERM 4700 3730092 - 3730080 - G 71 -9.1 -3.55444 | opp_overlap 3730079 3730086 CGTTGAGCCGGTAAA CGCCA CTT TGGCG ATGCGTTTCGAGGTC TERM 4701 3730559 - 3730539 - G 85 -11.9 -3.66356 | overlap 3730544 ATCGGCAATCTTAAA CAGAATCGC CGC GCGATCCTG CACCGAGGTGTGCGC TERM 4702 3730958 - 3730936 - R 93 -9.8 -4.65838 | opp_overlap 3730937, overlap 3730937 GAGATAGTTGAAAAA GCGGCTGACA ATT TGCCAGCCGT TGTTGGAATGATGAT TERM 4703 3730957 - 3730937 - R 86 -13.3 -3.3878 | opp_overlap 3730937, overlap 3730936 AGATAGTTGAAAAAG CGGCTGACA ATT TGCCAGCCG TTGTTGGAATGATGA TERM 4704 3730937 - 3730957 + r 86 -11.1 -3.66018 | opp_overlap 3730937 3730936 AGATAGTTGAAAAAG CGGCTGACA ATT TGCCAGCCG TTGTTGGAATGATGA yiaY 3732124 - 3730973 - | putative alcohol dehydrogenase TERM 4705 3732253 - 3732227 - R 100 -8.1 -5.13741 | opp_overlap 3732227 TTAATCTAATAAAAA GCACATTGTAT TCATT AAACAATGTGC TTTATTTAAAATCAT TERM 4706 3732227 - 3732253 + r 81 -8.1 -4.44448 | opp_overlap 3732227 TTAATCTAATAAAAA GCACATTGTAT TCATT AAACAATGTGC TTTATTTAAAATCAT TERM 4707 3732345 - 3732335 - R 71 -6.8 -4.08557 | overlap 3732336 TTCCGGAAATAATAA TGCG TCG CGCA ATAAATGATCATTTC selB 3734158 - 3732314 - | selenocysteinyl-tRNA-specific translation factor TERM 4708 3733751 - 3733730 - G 76 -9.5 -3.85698 | opp_overlap 3733730 3733712 TGCTGCGGTGATAAA CAGTTTTGC CTCA GCAAAACCG TATTCCCGCAGAACC selA 3735546 - 3734155 - | selenocysteine synthase yibF 3736252 - 3735644 - | glutathione S-transferase TERM 4709 3735795 - 3735781 - G 70 -10 -3.1544 | CGACAGCACAGGCAA TGGCGA TAG TCGCCA GATTGACCGTATCGG TERM 4710 3736223 - 3736210 - G 88 -5.3 -5.31072 | ACAACAGAATAAAAA GTTTG CGTA CAAAC GGGCTGGTGTAGCTA yibH 3737408 - 3736323 - | hypothetical protein TERM 4711 3736720 - 3736740 + g 78 -12.5 -2.91264 | AAGACCATCACCGGA CGCAGCGGC AAG GCAGCTGCG TATGTACCTGGGCGG TERM 4712 3737257 - 3737283 + g 74 -7.4 -4.09685 | gap 1 ATTCCCGTCACCTGT GGC-GTGATAG GGATCG CTATCACTGCC TTTTGCGCGGTAAAA yibI 3737773 - 3737411 - | hypothetical protein TERM 4713 3738049 - 3738034 - H 85 -3.3 -5.50723 | opp_overlap 3738034 CCATCAAAACAAAAA TGTGA CATTAC TCACA TTTAAATGCCATTTT TERM 4714 3739844 - 3739811 - g 70 -10.4 -3.21276 | overlap 3739809 TGGGCGCGGAGAACA TCTTCCTCGGTCGC AAAGCA GCAACCAAAGAAGA AGCGATTCGTTTTGC TERM 4715 3739953 - 3739930 - g 75 -5.2 -4.59773 | opp_overlap 3739930 CTGGATCGTGAAAAA CTGACCCCGA CTTA TCTGGGTGAG TCTATCGCGGTGCCA mtlA 3738310 - 3740223 + | PTS system, mannitol-specific enzyme IIABC components TERM 4716 3740234 - 3740253 + F 93 -13.6 -3.64703 | opp_overlap 3740229 AGTAATCCAATCCTA CCCTCTCC TCAC GGAGAGGG TTTGGGTGAGGGAAA TERM 4717 3740701 - 3740683 - g 74 -7.4 -4.07885 | CATCGCCTGTGAAAA CATGGTAC GCG GCACCACG CAGCTGAAAGGTCAT mtlD 3740318 - 3741466 + | mannitol-1-phosphate 5-dehydrogenase TERM 4718 3741894 - 3741920 + G 77 -12.2 -2.71712 | overlap 3741894 TGGTGAACTGCACTG CGTGGCGGCGTT ACC ACCGCCGCCACA GTTTGAACCAGCAGA TERM 4719 3741894 - 3741921 + G 82 -12 -3.53012 | gap 1, overlap 3741894 TGGTGAACTGCACTG C-GTGGCGGCGTT ACC ACCGCCGCCACAG TTTGAACCAGCAGAC mtlR 3741466 - 3742053 + | mannitol repressor protein TERM 4720 3742068 - 3742050 - f 76 -8.2 -4.10855 | AAAAGCCTTTCAAAA GTAAGCAA CGT CTGCTTAC TGCCCCTCTACCTGC yibL 3742558 - 3742920 + | hypothetical protein insB 3743434 - 3743039 - | IS1 ORF2 insA 3743736 - 3743461 - | IS1 ORF1 SF3639 3744375 - 3744923 + | hypothetical protein SF3640 3744967 - 3746115 + | hypothetical protein TERM 4721 3749077 - 3749065 - g 71 -2.7 -4.75472 | TGCAGAGGAAGAAAA TACAA TCT CTGTA GGTTCTTCTACTAAC SF3641 3746657 - 3749629 + | hypothetical protein TERM 4722 3749697 - 3749669 - f 100 -17.6 -3.71917 | AGGGCAAACGCCAAA TTGCCTGATGCG TTACG CGCATCAGGCAA GATAAGGCGCTCCGG TERM 4723 3749751 - 3749726 - f 79 -11.9 -3.28745 | opp_overlap 3749726, overlap 3749721 GGGTCAACAATCTAA GGGCAATTCTC TGAT GAGGATTGCCC TTTTCTTTACCAGAC TERM 4724 3749726 - 3749751 + F 100 -14.1 -4.86731 | opp_overlap 3749726 3749721 GGGTCAACAATCTAA GGGCAATTCTC TGAT GAGGATTGCCC TTTTCTTTACCAGAC TERM 4725 3751053 - 3751032 - g 70 -5.8 -4.1822 | CCGTACCTCAATAAA CTGGTTGC CCGTAT GCCACCAG TGGTCAGCGAGGCTA lldP 3749997 - 3751652 + | L-lactate permease TERM 4726 3752210 - 3752222 + G 80 -5.5 -5.02074 | CGTCAGCGGATGTAT CTGGT GCC ACCGG TTTTTTCACAACTGA lldR 3751652 - 3752428 + | DNA-binding transcriptional repressor LldR TERM 4727 3752541 - 3752523 - g 72 -11 -3.05343 | overlap 3752525 TGCATATTCTGAATA CACGCTGC GCC GCAACGTG GAAGATTTGTCAGAA lldD 3752425 - 3753615 + | L-lactate dehydrogenase TERM 4728 3753787 - 3753809 + F 77 -12 -2.79302 | opp_overlap 3753775 CAATTTTCTGCTATC CTGCCCCC GCACTAA GGGGGCAG TATGCTAAACATCGT yibK 3753811 - 3754284 + | putative tRNA/rRNA methyltransferase YibK cysE 3755158 - 3754337 - | serine acetyltransferase TERM 4729 3754674 - 3754710 + g 70 -3.6 -4.7254 | opp_overlap 3754672 3754675, overlap 3754675 GTTTCACCCACAACG ATGCCCGTGGCGTGGT CGAGC ATAATGCCACGGCCAA TTTTTGCTGCCGGGT TERM 4730 3755212 - 3755183 - R 82 -11.5 -3.56987 | gap 1, overlap 3755186 CACACGATGAGATAA TGA-CCGGCCCG TTCTGCG CGGGCCGGGTCA TAGCGGTAACAAAGG TERM 4731 3755208 - 3755186 - R 82 -13.4 -2.90888 | overlap 3755183 ACGATGAGATAATGA CCGGCCCG TTCTGCG CGGGCCGG GTCATAGCGGTAACA gpsA 3756257 - 3755238 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 4732 3756151 - 3756177 + g 78 -8.7 -4.1552 | gap 1 ATATGTTCAGGGTCA TGGCCCCAGAGG ACAA CCTC-GTGGCCA TTTCTTGCCAGGGTA TERM 4733 3756255 - 3756271 + g 81 -10.9 -3.69283 | overlap 3756266 AGCATTACGTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3756724 - 3756257 - | preprotein translocase subunit SecB grxC 3757038 - 3756787 - | glutaredoxin 3 yibN 3757611 - 3757180 - | hypothetical protein yibO 3757856 - 3759400 + | phosphoglyceromutase TERM 4734 3759471 - 3759520 + G 81 -9.3 -4.07568 | gap 1, opp_overlap 3759471, overlap 3759482 GCAGGTTTGCAATCA GGCCCATCAT-CTACGCCAGCGTT CTT AGCGCTGGCGTATTGTTGTGCGCC TTTTCCGCCCACGCG TERM 4735 3759482 - 3759508 + G 100 -17.4 -3.81022 | opp_overlap 3759471, overlap 3759471 ATCAGGCCCATCATC TACGCCAGCGTT CTT AGCGCTGGCGTA TTGTTGTGCGCCTTT TERM 4736 3759802 - 3759764 - g 75 -5 -4.77036 | overlap 3759749 3759766 CTGGAGCAGCAAAAA GCCGCCCAGGAGCGCAGC CTC GCCGCACAACTGGATGCC GCATTCCGTCAGGGC TERM 4737 3760017 - 3759999 - g 78 -8.9 -4.27474 | overlap 3760016 AAAGCGAGCAACAAA CGCTGTT ATATG AACAGCG CGCCCAACAGGCGAA yibP 3759410 - 3760693 + | hypothetical protein TERM 4738 3760829 - 3760819 - f 77 -6.8 -4.48987 | opp_overlap 3760801 CCCGCACAACGAAAA CCAG GTG CTGG CGATGCCTTCCGCTA TERM 4739 3761469 - 3761449 - g 88 -8.2 -4.59109 | opp_overlap 3761442 TACACCGCCGAAAAA CGCTGTGC CTGAT GCACCGCG TAATCCGTTCCGTGG yibQ 3760823 - 3761656 + | hypothetical protein insB 3762260 - 3761865 - | IS1 ORF2 insA 3762562 - 3762287 - | IS1 ORF1 TERM 4740 3762765 - 3762782 + r 93 -12.7 -3.83155 | opp_overlap 3762765 TATCCTCAGATAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC TERM 4741 3762782 - 3762765 - R 100 -12.7 -4.53303 | opp_overlap 3762765 TATCCTCAGATAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC tdh 3763817 - 3762792 - | L-threonine 3-dehydrogenase TERM 4742 3763640 - 3763657 + g 74 -2.7 -5.00884 | ATTCATGGCCCACGA CCATC GGCACCGG GATGG TTTTTTGCGACCACT kbl 3765023 - 3763827 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 4743 3765253 - 3765224 - R 100 -13.1 -4.99035 | opp_overlap 3765224 3765231, overlap 3765231 GCATTGATATAAAAA GAAAAAATGATGC CAAA GCATCATTTTTCC TATCTCAGTTGGCAT TERM 4744 3765224 - 3765253 + r 75 -10.9 -2.95091 | opp_overlap 3765224 3765231, overlap 3765231 GCATTGATATAAAAA GAAAAAATGATGC CAAA GCATCATTTTTCC TATCTCAGTTGGCAT TERM 4745 3765246 - 3765231 - R 100 -7.6 -5.98675 | opp_overlap 3765224 3765231, overlap 3765224 TATAAAAAGAAAAAA TGATGC CAAA GCATCA TTTTTCCTATCTCAG TERM 4746 3765231 - 3765246 + r 84 -7.6 -4.84527 | opp_overlap 3765231 3765224, overlap 3765224 TATAAAAAGAAAAAA TGATGC CAAA GCATCA TTTTTCCTATCTCAG htrL 3766155 - 3765298 - | hypothetical protein TERM 4747 3765816 - 3765829 + g 82 -2.3 -5.32944 | opp_overlap 3765809 3765808, overlap 3765810 3765817 AAACATACTCTGGTG ACCAG TACT CTGGG TTTTTTAATTGTCGA TERM 4748 3766197 - 3766187 - H 72 -2.6 -4.94703 | AATATAAAAAAAGAA TTAT ATC ATAA ATATTAACAGAATGT TERM 4749 3766880 - 3766864 - g 81 -6.5 -4.77036 | opp_overlap 3766864 CGCGAGTACGAAAAA CCGTTGA ATG TCTACGG TTACTCAAAATTCCT TERM 4750 3767052 - 3767040 - g 73 -9.1 -3.65522 | overlap 3767050 CACCCAGCTTAATAA CGGTG AAT CACCG AAGCTGTTCGAAGGT rfaD 3766459 - 3767391 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 4751 3767502 - 3767529 + G 76 -9.2 -3.7941 | gap 1, opp_overlap 3767499 3767502 CCAGGCGATAATCGA TGTGATGGCACCG GCA TGGTGCCGTC-CA TTATTATCGCGGATG rfaF 3767401 - 3768447 + | ADP-heptose:LPS heptosyltransferase II rfaC 3768481 - 3769443 + | ADP-heptose:LPS heptosyl transferase I TERM 4752 3769941 - 3769952 + G 74 -2.2 -5.10461 | CACCGTAGCATTTCT GACT CGAT GGTC TTTTTATTCCCTGCA waaI 3769440 - 3770648 + | lipid A-core, surface polymer ligase TERM 4753 3770654 - 3770682 + T 89 -11.1 -4.15222 | opp_overlap 3770660, overlap 3770660 AAACAAGTAAAAAAT AAAAAAGGCTGCA TAA TGCGGCCTTTTTA TTTATTCAAACCAAT TERM 4754 3770676 - 3770660 - T 100 -7.9 -6.04324 | opp_overlap 3770654 3770660 GTAAAAAATAAAAAA GGCTGCA TAA TGCGGCC TTTTTATTTATTCAA TERM 4755 3770660 - 3770676 + T 100 -10.1 -5.47159 | opp_overlap 3770660, overlap 3770654 GTAAAAAATAAAAAA GGCTGCA TAA TGCGGCC TTTTTATTTATTCAA waaD 3771826 - 3770684 - | lipopolysaccharide 1,2-N- acetylglucosaminetransferase waaJ 3772848 - 3771835 - | putative UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase waaY 3773580 - 3772873 - | lipopolysaccharide core biosynthesis protein waaL 3774613 - 3773606 - | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase waaP 3775462 - 3774656 - | lipopolysaccharide core biosynthesis protein TERM 4756 3774845 - 3774825 - G 77 -3.3 -5.10461 | TTCATTGAAGAAAAA TAAAGCCCT ATA AGATCTTTA TCGCGCCAACGACCT waaG 3776570 - 3775446 - | LPS alpha1,3-glucosyltransferase waaQ 3777625 - 3776567 - | lipopolysaccharide core biosynthesis protein insB 3778378 - 3777983 - | IS1 ORF2 insA 3778680 - 3778405 - | IS1 ORF1 TERM 4757 3779475 - 3779450 - g 75 -5.3 -4.61482 | overlap 3779451 GGGCGCAAAAAATAA CCAGGTAACCG TTAC CGGTAGCCTGA AATTCGATATTTCTG TERM 4758 3780001 - 3779991 - g 70 -6.8 -4.08945 | opp_overlap 3779991 ACTACGCTTGCAAAA GAGG TTT CCTC TTTACTCACCGACGC kdtA 3778854 - 3780131 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 3780139 - 3780618 + | phosphopantetheine adenylyltransferase mutM 3781466 - 3780657 - | formamidopyrimidine-DNA glycosylase TERM 4759 3781549 - 3781514 - R 100 -16.4 -2.90194 | opp_overlap 3781517 3781524, overlap 3781517 3781524 ATGGGGGCAAGCAGA TAACAAAAAACCCCGC CGGA GCGAGGTTTTTCGTTA CATCAAAGCGAGAAT TERM 4760 3781546 - 3781517 - R 93 -13.7 -3.59946 | opp_overlap 3781517 3781524, overlap 3781514 3781524 GGGGCAAGCAGATAA CAAAAAACCCCGC CGGA GCGAGGTTTTTCG TTACATCAAAGCGAG TERM 4761 3781539 - 3781524 - R 100 -8.2 -5.60689 | opp_overlap 3781524 3781517, overlap 3781517 3781514 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTTTCGTTACATCA TERM 4762 3781524 - 3781539 + r 78 -6 -4.88407 | opp_overlap 3781517 3781514 3781524, overlap 3781517 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTTTCGTTACATCA rpmG 3781731 - 3781564 - | 50S ribosomal protein L33 TERM 4763 3781608 - 3781632 + g 70 -3.6 -4.62872 | gap 1, opp_overlap 3781608 CGTGCTGACGAACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGCTTAGT rpmB 3781988 - 3781752 - | 50S ribosomal protein L28 TERM 4764 3782192 - 3782179 - R 72 -6.7 -4.2074 | overlap 3782182 TCCCGAACAGACAAA GATCC CGAA GGATC GCGCATAGCGGGTTA radC 3782879 - 3782205 - | DNA repair protein RadC dfp 3783045 - 3784265 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 4765 3784575 - 3784603 + G 77 -3 -5.08601 | opp_overlap 3784579, overlap 3784580 3784590 GGACAGCTTCACCAT TCAACCTGGCGA ACGCA TCGCCCAGATGA TTTTTGTTCCGGTAG dut 3784243 - 3784701 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 4766 3784754 - 3784734 - f 76 -11.9 -2.50817 | overlap 3784733 3784731 3784729 AACGTCATAACATAG CCGCAAACA TTT CGTTTGCGG TCATAGCGTGGGTGC slmA 3784808 - 3785404 + | nucleoid occlusion protein TERM 4767 3785408 - 3785435 + T 90 -9.8 -4.41348 | opp_overlap 3785407 3785405 3785410, overlap 3785409 3785410 CAGTTGCAGTAATAT GACGCCGGATGA CTTT TCATCCGGCGAG TTTCTTTAAACGCCA TERM 4768 3785409 - 3785434 + T 83 -13.3 -3.24488 | opp_overlap 3785407 3785405 3785410, overlap 3785408 3785410 AGTTGCAGTAATATG ACGCCGGATGA CTTT TCATCCGGCGA GTTTCTTTAAACGCC TERM 4769 3785433 - 3785410 - T 100 -16.8 -2.77523 | opp_overlap 3785410 3785409 3785408, overlap 3785407 3785405 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC TERM 4770 3785410 - 3785433 + T 95 -16.8 -2.54371 | opp_overlap 3785407 3785405 3785410, overlap 3785409 3785408 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC pyrE 3786082 - 3785441 - | orotate phosphoribosyltransferase TERM 4771 3786140 - 3786123 - R 100 -11.3 -6.06529 | TACAGACAAAAAAAA GGCGACT CATC AGTCGCC TTAAAAATCAGTTTG rph 3786864 - 3786148 - | ribonuclease PH yicC 3786991 - 3787854 + | hypothetical protein TERM 4772 3787892 - 3787916 + F 76 -4.2 -5.06414 | opp_overlap 3787892 TTCAGCCTTCACAAA TGCCGCCC ACTCAAACA GAGCGGCA TTTTTCTTCCCCGCA TERM 4773 3788279 - 3788248 - g 100 -16 -2.63079 | opp_overlap 3788233 3788245, overlap 3788233 3788244 3788245 TGGTCACACAATTGA TGACCATTTCGAGG AGAT CCTCGATATGGTCA AAATTGGCTCAAATG dinD 3788075 - 3788899 + | DNA-damage-inducible protein D yicG 3789136 - 3789807 + | hypothetical protein TERM 4774 3789827 - 3789852 + T 95 -11.9 -3.89354 | CAAAACCTGTGATCT GCTGGGCAG CCAGCCAA CTGCCCAGC TTCTTGATTTGCGCA ligB 3791486 - 3789804 - | NAD-dependent DNA ligase LigB TERM 4775 3790865 - 3790829 - GT 79 -4.4 -4.9725 | gap 2, overlap 3790831 ATGCCCAGACAAAAA CAGCCAGTGAGTTTAGCG TGT CGCTATTCCC-CTGGC-G CATCATCAGGCCAGC TERM 4776 3790864 - 3790831 - GT 76 -8.1 -4.11141 | gap 1, overlap 3790829 GCCCAGACAAAAACA GCCAGTGAGTTTAGCG TGT CGCTATTCCC-CTGGC GCATCATCAGGCCAG SF3687 3791610 - 3791347 - | hypothetical protein TERM 4777 3791567 - 3791586 + gH 70 -6.4 -4.18488 | AACGGAGTCTGCGAG GACGCTTC CTGA GAATCGTC TTTATTGCAGTAAAT TERM 4778 3791799 - 3791811 + G 82 -9.1 -4.15044 | opp_overlap 3791795 3791799 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA gmk 3791744 - 3792367 + | guanylate kinase rpoZ 3792422 - 3792697 + | DNA-directed RNA polymerase subunit omega TERM 4779 3793272 - 3793254 - g 70 -5.2 -4.371 | opp_overlap 3793254, overlap 3793248 TCCACCACATTAAAA CCGAACTC GAA GAGCTGGG TTTTGAGGCGCTGTA spoT 3792716 - 3794824 + | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase spoU 3794831 - 3795520 + | tRNA guanosine-2'-O-methyltransferase TERM 4780 3797343 - 3797324 - g 90 -10 -4.36914 | overlap 3797340 TGCTGCTCTACAAAA CGCCGCTT TCTA AAACGGCG CAAATTCGCCTGCAA recG 3795526 - 3797607 + | ATP-dependent DNA helicase RecG TERM 4781 3797633 - 3797610 - T 83 -9.5 -4.14392 | opp_overlap 3797611, overlap 3797611 3797626 CTCGAATGCGTAAAA GGCGGCGGT GAGAAG ACCGCCGCT TCATCGGTTAACCGG TERM 4782 3797632 - 3797611 - T 82 -13 -3.08314 | opp_overlap 3797611, overlap 3797610 3797626 TCGAATGCGTAAAAG GCGGCGGT GAGAAG ACCGCCGC TTCATCGGTTAACCG TERM 4783 3797611 - 3797632 + T 83 -13 -3.21912 | opp_overlap 3797610 3797611 3797626 TCGAATGCGTAAAAG GCGGCGGT GAGAAG ACCGCCGC TTCATCGGTTAACCG gltS 3798846 - 3797641 - | glutamate transport protein TERM 4784 3798510 - 3798520 + g 72 -6.8 -4.18018 | opp_overlap 3798510 GGCTAGCCATACCAA TGCC AAT GGCA TTTTGCATCACCAAC TERM 4785 3799060 - 3799071 + H 73 -4.4 -4.80455 | TTAGATGAGGATGTG GCAA ACGT TTGC TTTTCTCTTTCGGTC TERM 4786 3800059 - 3800047 - g 76 -9.1 -3.83026 | overlap 3800056 CCGCTGTACATGAAA CGCCT GAA AGGCG GCGTGCTGGCAAACG TERM 4787 3800394 - 3800407 + G 72 -6.7 -4.24002 | overlap 3800374 TGGTCTGGGCGTGTC TCAGC AGCC GCTGA TTTTGCAGTTTGCCC yicE 3799126 - 3800517 + | putative transport protein TERM 4788 3800524 - 3800512 - f 73 -4.1 -4.91109 | opp_overlap 3800491, overlap 3800518 3800519 3800522 TTCCCACCAGAAAAA CAGTA ATT CACTG GCGGCGGTAAGATAA TERM 4789 3800551 - 3800522 - f 81 -13 -2.63644 | gap 1, overlap 3800512 3800519 3800518 AAAAACAGTAATTCA CTGGCGGCGGTAA GATAA TTACCGCCGC-AG TCTCACCTCTTTCAC yicH 3800638 - 3802347 + | hypothetical protein TERM 4790 3802358 - 3802386 + T 88 -14.5 -3.08312 | opp_overlap 3802356 3802355 GGTAAACATCAATCT CGCCGGGTACGAC TCA GACGTACCCGGCA TTCCGTCAATAGATT yicI 3804718 - 3802400 - | alpha-xylosidase YicI TERM 4791 3804912 - 3804925 + H 76 -5.2 -4.83615 | ATGATGCTAATCGTG GCGC TGTTCT GCGC TTTTTCTGCCGCATC TERM 4792 3807075 - 3807065 - g 100 -3.2 -5.61689 | AAAAGGAAGAAAAAA TCGC GCA GCAA ATGAGTCTGAAAAAT TERM 4793 3807761 - 3807741 - g 80 -11.3 -3.35298 | opp_overlap 3807745, overlap 3807745 TAAGGAAAGCATTAA CCAAGTAAT TGA ATTACTTGG ATATAAGGGAAGACT SF3698 3806770 - 3807981 + | putative integrase TERM 4794 3808027 - 3808051 + F 100 -12.9 -5.35721 | CAATTAAGTATTTTA TCCTCTGGCCT ACA AGGCTGGAGGA TTTTTGTTATTATAT shiA 3808393 - 3809436 + | hypothetical protein TERM 4795 3809503 - 3809523 + F 87 -9.7 -4.31397 | AACACTGTGTTCCTT CCCCAGG TGATTAC CCTGGGG TTATTTTCTGAAAGT TERM 4796 3809894 - 3809878 - f 70 -9.5 -3.03159 | opp_overlap 3809874 3809873 3809892 CCAACTTTTTTAATA TGGACAA TAG TTGTCCA TACGGTGGTTTTATA shiB 3809951 - 3810412 + | hypothetical protein SF3701 3810900 - 3810409 - | IS3 ORF2 SF3702 3811264 - 3810872 - | hypothetical protein SF3703 3811560 - 3811261 - | IS3 ORF1 shiC 3811745 - 3812263 + | hypothetical protein SF3705 3813012 - 3812344 - | IS629 ORF2 TERM 4797 3812911 - 3812923 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SF3706 3813553 - 3813227 - | IS629 ORF1 TERM 4798 3813760 - 3813733 - R 86 -12.1 -3.61398 | CCTGTCTGGCAACAA TCGCGTCCATC TGTATT AATGGACGCGA ACGATGAACTCTCAA SF3707 3814495 - 3814223 - | hypothetical protein SF3708 3815461 - 3814556 - | insertion element IS2 transposase InsD SF3709 3815784 - 3815419 - | insertion sequence 2 OrfA protein SF3710 3816151 - 3816345 + | hypothetical protein shiD 3817103 - 3817501 + | colV-immunity protein TERM 4799 3817798 - 3817775 - T 100 -7.4 -5.97575 | overlap 3817777 AATTGATAAAAAAAA CGCCAGCA ACACATAG TGCCGGCG GAGGGAATACCCCAT insB 3818525 - 3818022 - | IS1 ORF2 TERM 4800 3818996 - 3818972 - gR 75 -5.2 -4.64992 | gap 1, opp_overlap 3818979 CCCAAAAAACATAAA GATGAAAGAAA CTTA TTTCTT-CATC CTCAACTCGTCATCA imm 3820714 - 3819521 - | putative membrane transport protein shiE 3818600 - 3819571 + | hypothetical protein TERM 4801 3820772 - 3820823 + FH 72 -5.6 -4.39166 | gap 1, opp_overlap 3820764 3820775, overlap 3820772 3820775 3820785 AATTAATTTATCTGA CAATAACATTTATTGTTGATAATGA GAA TCATTATTGAC-ATAATTGTTATTA TTTTACTGTGTGGGA TERM 4802 3820775 - 3820820 + FH 74 -7.3 -4.30909 | gap 1, opp_overlap 3820764 3820775, overlap 3820772 3820772 3820785 TAATTTATCTGACAA TAACATTTATTGTTGATAATGA GAA TCATTATTGAC-ATAATTGTTA TTATTTTACTGTGTG TERM 4803 3820890 - 3820871 - g 82 -7.8 -4.56597 | overlap 3820872 CTGCCCTCTGAAAAA CCAGCCAC AGAT GTGGCTGC GCAGTGCTTCCTGAA TERM 4804 3820889 - 3820872 - g 80 -11.3 -3.33744 | overlap 3820871 TGCCCTCTGAAAAAC CAGCCAC AGAT GTGGCTG CGCAGTGCTTCCTGA TERM 4805 3820983 - 3820962 - g 81 -13.1 -2.5547 | overlap 3820948 3820961 ACCCGCCAGACGAAT TGCTCATCC CGCT GGATGAGCA GAAATCGCTCCATTT TERM 4806 3821375 - 3821386 + G 70 -5.8 -4.19817 | overlap 3821364 ATGGCACCCCACTTC CCAC TGCG GTGG TTTTCGGTGGATAAA iucA 3820793 - 3822574 + | siderophore biosynthesis protein TERM 4807 3823478 - 3823498 + G 85 -11.9 -3.61715 | AAGCGCTCGCGCATG GTGATGGCG GAT CGTCATCAC TTCTTCACGGAGGTC iucB 3822575 - 3823522 + | siderophore biosynthesis protein TERM 4808 3825099 - 3825109 + G 70 -4.6 -4.4727 | overlap 3825094 TCCACAAATGGCAGA GCGT TTT GCGC TTTTCTCACTCTTCA iucC 3823522 - 3825264 + | siderophore biosynthesis protein TERM 4809 3825362 - 3825376 + G 71 -2.8 -4.7373 | GAACTGTCTCTTCTT TGACGA ACA TCCTCA TTTTTCCTGGCATCC iucD 3825261 - 3826598 + | lysine:N6-hydroxylase iutA 3826604 - 3828799 + | putative ferric siderophore receptor TERM 4810 3828823 - 3828870 + F 82 -12.9 -2.8547 | opp_overlap 3828834 3828837, overlap 3828834 3828837 CTTTTGCAACAAGGG TATGCTGTAAACAACATGGTC CTTGGT GGCCATGTTGTTTACAGCCAG TATAATATACAGCCT TERM 4811 3828834 - 3828859 + F 75 -9.8 -3.54129 | opp_overlap 3828834 3828837, overlap 3828823 3828837 AGGGTATGCTGTAAA CAACATGGTC CTTGGT GGCCATGTTG TTTACAGCCAGTATA SF3720 3829720 - 3830478 + | serine protease SF3721 3831354 - 3830449 - | insertion element IS2 transposase InsD SF3722 3831677 - 3831312 - | insertion sequence 2 OrfA protein TERM 4812 3832591 - 3832601 + G 77 -8.2 -4.10164 | opp_overlap 3832583 3832590, overlap 3832590 GACAGTACGCAAATT CGCG GCG CGCG TTTGTATACTGATAA TERM 4813 3833043 - 3833059 + G 70 -4.3 -4.48299 | overlap 3833045 TGTCGGTAAAGATCT TGGCGCT TTG GGCGCAA TTTCTTTCGATGTGA TERM 4814 3833543 - 3833565 + G 78 -10.6 -3.49232 | overlap 3833542 TTCCTTTATCGGGCT GGTGGGGTAA TAG TTACGCCACC TATTCTGTTTCGCAA lpfC 3831823 - 3834345 + | putative long polar fimbriae insB 3834898 - 3834503 - | IS1 ORF2 insA 3835200 - 3834925 - | IS1 ORF1 TERM 4815 3835722 - 3835739 + G 70 -6.3 -4.1891 | gap 1, opp_overlap 3835698, overlap 3835724 CCCCGGTGGATTACT CA-CAGCC GAT GGCTGATG TTTATATTCGGGGCG SF3726 3835511 - 3836206 + | putative fimbrial protein pstS 3836454 - 3837494 + | phosphate transporter subunit pstC 3837581 - 3838540 + | phosphate transporter permease subunit pstA 3838540 - 3839430 + | phosphate transporter permease subunit pstB 3839522 - 3840295 + | phosphate transporter subunit phoU 3840310 - 3841035 + | transcriptional regulator PhoU TERM 4816 3841045 - 3841075 + F 95 -14.3 -3.63054 | opp_overlap 3841045 3841049, overlap 3841049 AAATAATTCACCAGA CAAATCCCAATAA CTTAA TTATTGGGATTTG TTATATATAACTTTA TERM 4817 3841075 - 3841045 - f 93 -15 -2.85021 | opp_overlap 3841045 3841049, overlap 3841049 AAATAATTCACCAGA CAAATCCCAATAAC TTA ATTATTGGGATTTG TTATATATAACTTTA TERM 4818 3841071 - 3841049 - f 83 -10 -4.09822 | opp_overlap 3841045 3841049, overlap 3841045 AATTCACCAGACAAA TCCCAATAAC TTA ATTATTGGGA TTTGTTATATATAAC TERM 4819 3841049 - 3841071 + F 86 -9.3 -4.42974 | opp_overlap 3841049 3841045, overlap 3841045 AATTCACCAGACAAA TCCCAATAA CTTAA TTATTGGGA TTTGTTATATATAAC TERM 4820 3841259 - 3841290 + F 100 -5.1 -6.5058 | opp_overlap 3841258 3841268 ATTCGCAGGCAAAAC CTGACATAACCAG AGAATA CTGGTGAAGTCGG TTTTTTTTTGTTTAT bglG 3841322 - 3842143 + | transcriptional antiterminator BglG bglF 3842277 - 3844154 + | beta-glucoside-specific PTS system components IIABC insA 3845256 - 3845531 + | IS1 ORF1 insB 3845558 - 3845953 + | IS1 ORF2 TERM 4821 3846367 - 3846392 + F 78 -12.7 -2.64572 | opp_overlap 3846364, overlap 3846365 3846361 3846358 GCACCTTAATTATCG TCGCATTCAGA ACAG TCTGGATGCGA TACGTTAATTCTTTC TERM 4822 3846561 - 3846546 - g 79 -4.7 -4.9218 | GAGTTATTAGAAAAA GCGTT AAGAGA AACGC AAAGCGAACTCAAAA TERM 4823 3846741 - 3846725 - g 74 -2.1 -5.16206 | opp_overlap 3846726, overlap 3846726 AAATGAAGAGAAAAA TGCCAGT GAG ACAGGCT CGATTTATTCTTCCA TERM 4824 3847159 - 3847147 - g 72 -7.7 -3.92659 | overlap 3847141 CGCCGAAAATTGAAA TCCAG ATG CTGGA CTGGAAAACGCAGCG yieC 3846468 - 3848045 + | putative receptor protein TERM 4825 3848094 - 3848117 + G 86 -11 -3.97947 | opp_overlap 3848087, overlap 3848097 TAAAAATTGCTGCTT TAACGCTGGC TATT GCCAGCGGTA TTTCTGCTCAGTGGG TERM 4826 3848097 - 3848114 + G 77 -12.7 -2.7439 | opp_overlap 3848087, overlap 3848094 AAATTGCTGCTTTAA CGCTGGC TATT GCCAGCG GTATTTCTGCTCAGT yieL 3848072 - 3849247 + | putative xylanase yieK 3849249 - 3849971 + | putative 6-phosphogluconolactonase TERM 4827 3850012 - 3849985 - T 72 -6.3 -4.2204 | gap 1, opp_overlap 3849985 3849983 AAGCTGAAGAAATAA GGCCGGA-TGTA TGAAT TACGCTCCGGCC TGTTCTCATTATTTA SF3740 3851430 - 3850624 - | ISSfl4 ORF3 SF3741 3851907 - 3851560 - | ISSfl4 ORF2 SF3742 3852578 - 3851904 - | ISSfl4 ORF1 TERM 4828 3852242 - 3852230 - G 73 -9.1 -3.62046 | opp_overlap 3852222 CGATCCGGGCAACAA CAGCC CCA GGCTG TAATGCCTGCTTAGC TERM 4829 3852582 - 3852609 + r 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG yieI 3853219 - 3852746 - | putative inner membrane protein TERM 4830 3853105 - 3853117 + g 74 -7.7 -4.08394 | opp_overlap 3853105 GTATTATTACCAAAA GAACC AGC GGTTC TTTTGCGAAGAATAT TERM 4831 3853117 - 3853105 - G 78 -7.7 -4.32034 | opp_overlap 3853105 GTATTATTACCAAAA GAACC AGC GGTTC TTTTGCGAAGAATAT yieH 3853942 - 3853286 - | 6-phosphogluconate phosphatase yieG 3854107 - 3855444 + | putative membrane / transport protein TERM 4832 3855465 - 3855489 + T 93 -6.4 -5.65927 | gap 1, opp_overlap 3855451 3855465 ATAGCGCATTAAAAA CCCGCCATGCA TGAT TAC-TGGCGGG TTTTTTATTTAGATC TERM 4833 3855489 - 3855465 - T 88 -8.6 -4.74132 | gap 1, opp_overlap 3855465, overlap 3855451 ATAGCGCATTAAAAA CCCGCCATGCA TGAT TAC-TGGCGGG TTTTTTATTTAGATC yieF 3856064 - 3855498 - | hypothetical protein TERM 4834 3855672 - 3855662 - G 72 -6.8 -4.2828 | TTGCATCGAGGAAAA CCAG AAT CTGG CGCAGGTGATACTGA yieE 3856835 - 3856086 - | hypothetical protein SF3749 3857370 - 3857672 + | IS600 ORF1 SF3750 3857708 - 3858526 + | IS600 ORF2 yidY 3860368 - 3859193 - | multidrug efflux system protein MdtL TERM 4835 3859625 - 3859592 - G 73 -9 -3.60475 | gap 1, overlap 3859579 AATTCCCAGCGCAAA TGGCGTCGAGAATGA AAAGG TCATGCT-GACGCCA GCGGTCAGCGCCATA TERM 4836 3859792 - 3859764 - G 74 -2.3 -5.14563 | opp_overlap 3859772, overlap 3859772 CGGCTGAGGAAAAAA CGATTAAGCAGCG ACT CGCTATTTTCTCG TGGTTTGTCCGAAGC TERM 4837 3860490 - 3860468 - R 83 -13.5 -3.12351 | opp_overlap 3860471, overlap 3860471 TTTCCTGAGAGGCAA GAAGCCAGC GAATG GCTGGCTTC TTGAAGGATTTAGCC TERM 4838 3860487 - 3860471 - R 76 -9.4 -3.70773 | opp_overlap 3860471, overlap 3860468 CCTGAGAGGCAAGAA GCCAGC GAATG GCTGGC TTCTTGAAGGATTTA TERM 4839 3860471 - 3860487 + r 72 -9.4 -3.64283 | opp_overlap 3860471 3860468 CCTGAGAGGCAAGAA GCCAGC GAATG GCTGGC TTCTTGAAGGATTTA tnaB 3861747 - 3860500 - | tryptophan permease TnaB TERM 4840 3861644 - 3861634 - G 75 -4.6 -4.85599 | GGCACCCCAGAAAAA CCAG GCA CCGG CAAGATCAACAGGTA tnaA 3863253 - 3861838 - | tryptophanase TERM 4841 3862604 - 3862620 + g 78 -8 -4.35524 | ATATCGTATTTCTTC GCGATG CTGTA CATCGC TTTTAAGTTTGCCAG TERM 4842 3863487 - 3863505 + r 73 -10.4 -3.06009 | AATTAAGGGCGGTGA TCGACAAT CTT ATTGTCGA TATTGAACCATTTTG tnaL 3863548 - 3863474 - | tryptophanase leader peptide insA 3863655 - 3863930 + | IS1 ORF1 insB 3863957 - 3864352 + | IS1 ORF2 TERM 4843 3864558 - 3864523 - T 86 -12 -3.53712 | gap 1, opp_overlap 3864528 3864550, overlap 3864520 3864524 3864548 3864550 AGTGCTAACAATGAA GCGAAGCCGCA-TCTGA CAG TCAGAATACGGCTTCGT AAGCGCGGTTACTTA TERM 4844 3864557 - 3864524 - T 90 -15.5 -2.71745 | gap 1, opp_overlap 3864528 3864550, overlap 3864520 3864523 3864548 3864550 GTGCTAACAATGAAG CGAAGCCGCA-TCTGA CAG TCAGAATACGGCTTCG TAAGCGCGGTTACTT trmE 3865931 - 3864567 - | tRNA modification GTPase TrmE TERM 4845 3864909 - 3864923 + g 76 -7.8 -4.20516 | overlap 3864899 CATTCCCAGCGTTTC GCCGGT GAT ATCGGC TTTATTGCGTACCAC TERM 4846 3865993 - 3866012 + r 79 -9.2 -4.17048 | opp_overlap 3865994, overlap 3865994 CTACGAAAAGAAAAA AGGCGGTC AACT GACCGCCC TTATTTTAGCGAAAA TERM 4847 3865994 - 3866011 + r 80 -12.7 -3.09908 | opp_overlap 3865994, overlap 3865993 TACGAAAAGAAAAAA GGCGGTC AACT GACCGCC CTTATTTTAGCGAAA TERM 4848 3866011 - 3865994 - R 100 -12.7 -5.83211 | opp_overlap 3865994 3865993 TACGAAAAGAAAAAA GGCGGTC AACT GACCGCC CTTATTTTAGCGAAA yidC 3867683 - 3866037 - | putative inner membrane protein translocase component YidC rnpA 3868266 - 3867907 - | ribonuclease P TERM 4849 3868082 - 3868102 + g 74 -2.6 -5.06816 | gap 1 CGTTTAATCCGATTG CGTTC-ATG GGCG CGTCGAACG TTTTTCTTGGCGACT rpmH 3868423 - 3868283 - | 50S ribosomal protein L34 TERM 4850 3869359 - 3869340 - g 74 -10 -3.54129 | gap 1, opp_overlap 3869339 3869338, overlap 3869311 CACAGGTGGCGCAAA CGCAGC-CG CAA CGTGCTGCG CCTTCTACGCGCTCA dnaA 3869099 - 3870325 + | replication initiation protein DnaA dnaN 3870436 - 3871536 + | DNA polymerase III subunit beta TERM 4851 3871669 - 3871688 + G 73 -9.2 -3.63968 | overlap 3871685 TGGAAGCCATCTATA CGCTCGGC CATG GTCGGGCG TTTCGCAGTTTGCAG TERM 4852 3872094 - 3872054 - g 70 -10.3 -3.1372 | overlap 3872052 GACTCGTTACGAACA GCTACGCCCGTGGGATAAA GAA CTGATCCCGCTGGCGGAGC AAATCAGCACCTGGC recF 3871536 - 3872609 + | recombination protein F TERM 4853 3873870 - 3873856 - g 74 -10 -3.53012 | GGCCTGCCGGGCAAA CTGGCA GAC TGCCAG GAACGCGATCCGGCG TERM 4854 3874979 - 3875007 + G 72 -7.3 -4.15044 | overlap 3874980 3874983 TGTTCACCACGCTGA TGGGCGACGCCGT AGA ACCGCGTCGTGCG TTTATTGAAGAGAAC TERM 4855 3874983 - 3875003 + G 70 -11.1 -2.75825 | overlap 3874980 3874979 CACCACGCTGATGGG CGACGCCGT AGA ACCGCGTCG TGCGTTTATTGAAGA gyrB 3872638 - 3875052 + | DNA gyrase subunit B TERM 4856 3875214 - 3875184 - f 100 -17 -3.47751 | opp_overlap 3875189, overlap 3875189 GGCAAGAAGCTATAA GAAAAGGGCGGAGA TCA TCTCCGCCCTTTTT ATTTCTGCAATCCGC TERM 4857 3875189 - 3875209 + F 100 -16.9 -5.38054 | opp_overlap 3875189 3875184 GAAGCTATAAGAAAA GGGCGGAGA TCA TCTCCGCCC TTTTTATTTCTGCAA TERM 4858 3875209 - 3875189 - f 100 -16.9 -4.80959 | opp_overlap 3875189, overlap 3875184 GAAGCTATAAGAAAA GGGCGGAGA TCA TCTCCGCCC TTTTTATTTCTGCAA yidB 3875292 - 3875690 + | hypothetical protein TERM 4859 3875896 - 3875884 - g 72 -5.5 -4.56775 | ACCCGCCGTTAAAAA TGCGA TTG CCGCA GCTCGCGCCCGTGGC yidA 3875804 - 3876616 + | sugar phosphatase TERM 4860 3876614 - 3876664 + T 100 -16.4 -3.57418 | gap 1, opp_overlap 3876617, overlap 3876617 AAGTATGTGCTGAAT TAATCTGTGGGCGGGCAAACAGC ATAAAC GC-GTTTGCCCGCTTACTGATTA TTGGTTTACTGCATA TERM 4861 3876661 - 3876617 - T 73 -10 -3.34013 | gap 1, opp_overlap 3876614 3876617 TATGTGCTGAATTAA TCTGTGGGCGGGCAAACAGCA TAAA CGC-GTTTGCCCGCTTACTGA TTATTGGTTTACTGC TERM 4862 3876617 - 3876661 + T 100 -13.7 -3.91541 | gap 1, opp_overlap 3876617, overlap 3876614 TATGTGCTGAATTAA TCTGTGGGCGGGCAAACAGC ATAAAC GC-GTTTGCCCGCTTACTGA TTATTGGTTTACTGC SF3768 3877318 - 3876662 - | hypothetical protein yidW 3877596 - 3878285 + | regulator protein for dgo operon dgoK 3878282 - 3879160 + | 2-oxo-3-deoxygalactonate kinase dgoT 3880981 - 3882318 + | D-galactonate transport protein yidS 3883379 - 3882279 - | putative oxidoreductase TERM 4863 3882329 - 3882363 + g 85 -10.1 -4.15222 | opp_overlap 3882337 GATAATCTTTCAACT GTGGAATATGCGC CACACCACT GCGCATAATCCAC TTTCTTAAAGCCGGT TERM 4864 3882373 - 3882394 + g 95 -9.4 -4.87807 | opp_overlap 3882373 ATCCACTTTCTTAAA GCCGGTGC GGTCAG GCATCGGC TTTTTACTATCTTGC TERM 4865 3883264 - 3883278 + g 73 -4.2 -4.82901 | overlap 3883262 3883261 TTGCTGAAACCTTCA GTACCG CAC TGGTGC TTTTTATCCAGCGCG TERM 4866 3884312 - 3884279 - g 81 -9.5 -4.0098 | gap 1, opp_overlap 3884301 GTGGAACGGAAACAA CCCTACCCG-CGCCAC CGC GTGGCGTCGTGCAGCG ACGTTTAACCTTTAC yidR 3883444 - 3884718 + | hypothetical protein yidQ 3885052 - 3884720 - | hypothetical protein ibpA 3885357 - 3885770 + | heat shock protein IbpA TERM 4867 3886157 - 3886128 - g 88 -2.1 -5.57729 | opp_overlap 3886128 3886141 3886151, overlap 3886151 AAAGAAGAGAAAAAA TGGCTGCATCA AGGGCTTA TGAATCAGCCA TTTAGCCTGAGTTTT ibpB 3885882 - 3886310 + | heat shock chaperone IbpB TERM 4868 3886326 - 3886346 + F 100 -14.7 -5.90231 | CTAGCTATTCTCTTT GCCCCGCCA TTC TGGTGGGGC TTTTTTTGTCTTTCT yidE 3886506 - 3888167 + | hypothetical protein yidP 3888880 - 3888206 - | putative transcriptional regulator TERM 4869 3888966 - 3888952 - H 82 -2.9 -5.47821 | opp_overlap 3888952, overlap 3888942 ATCGATTGAAAAAAA TCTTT TTTTT AAAGA TGTGTTCGATGCTGT TERM 4870 3890035 - 3890045 + H 77 -6.8 -4.43208 | CTCAAAAATCTTTGG TGCC GTG GGCA TTTCTTTAGCGATGT TERM 4871 3890482 - 3890471 - g 70 -5.8 -4.22041 | AAAGCCGAATACAAA GCCT CGCG AGGC CAAACCACCGCTGCA glvB 3890306 - 3890791 + | arbutin specific enzyme IIB component of PTS TERM 4872 3891609 - 3891641 + T 87 -11.3 -3.90922 | overlap 3891611 3891612 GAGTTACGTTAATTG TGTGGACTGGCATCC GTT GGGTGCTGGTCCGTA TTCTTTAGCACGGCT TERM 4873 3891611 - 3891639 + T 86 -11.7 -3.54488 | overlap 3891609 3891612 GTTACGTTAATTGTG TGGACTGGCATCC GTT GGGTGCTGGTCCG TATTCTTTAGCACGG TERM 4874 3891612 - 3891638 + T 81 -13 -2.72371 | overlap 3891611 3891609 TTACGTTAATTGTGT GGACTGGCATCC GTT GGGTGCTGGTCC GTATTCTTTAGCACG yidL 3892495 - 3891602 - | putative ARAC-type regulatory protein yidK 3892662 - 3894377 + | putative symporter YidK TERM 4875 3895853 - 3895843 - T 85 -5.4 -5.31275 | GTGGAGGAGAAAAAA CAGA AAT TCTG ACGATAATGCCCGCT TERM 4876 3895920 - 3895906 - T 72 -9.2 -3.53811 | TTCAGGCTGCTTAAA CCAGCG AAC CGCCGG TCAGGAAGGAAAAAA yidI 3896314 - 3895901 - | hypothetical protein TERM 4877 3896048 - 3896033 - G 70 -6.1 -4.17556 | CATACCGCCAATAAA TGCGC AAAGTA GCGCA GCAATGGCCAGTGCG yidH 3896423 - 3896770 + | hypothetical protein yidG 3896760 - 3897122 + | hypothetical protein TERM 4878 3897160 - 3897201 + G 75 -4.4 -4.86033 | opp_overlap 3897163 3897181, overlap 3897162 TGAAGAGGACAGGCA TAAGCTGGTTGTAGAGTA CAAGGA TGCTCTGCAACCTGCCGA TTTTTATCACAATTT TERM 4879 3897489 - 3897523 + G 90 -7.7 -4.92757 | opp_overlap 3897489, overlap 3897472 ACGCTCGGCAGGAGA CGCCAGACAGCGTGC TTTGT GCGGGCTATCAGGCG TTTTATTCTTACTCC yidF 3897119 - 3897616 + | putative transcriptional regulator TERM 4880 3897672 - 3897629 - T 79 -10.3 -3.53444 | gap 2 TGACGTGCGCTTAAA CGGGCTGCCCCTGATGCGACA TCCG CGTCGC--CAGCGGCAGCCAG CACAGCACGATCAAC emrD 3898676 - 3897624 - | multidrug resistance protein D TERM 4881 3898060 - 3898041 - G 80 -5.6 -5.02074 | overlap 3898043 CCATGCCCCAAAAAA TGCCGCCG GAAT CGGCAGAA TAAACAAAATACTGA ilvB 3898737 - 3900335 + | acetolactate synthase catalytic subunit TERM 4882 3900498 - 3900487 - g 74 -5.8 -4.45485 | AGGACAGCGACAAAA GCCA TATC TGGC TACTGGTCAATGACG ilvN 3900339 - 3900629 + | acetolactate synthase 1 regulatory subunit TERM 4883 3900652 - 3900676 + F 100 -12.2 -6.06723 | opp_overlap 3900652 3900651 3900649 AGGCTTGAACAACAT CGCGCTTATC GTTAA GGTAAGCGCG TTTTTTTTTACCCGC uhpA 3900704 - 3901294 + | DNA-binding transcriptional activator UhpA TERM 4884 3902358 - 3902372 + G 72 -7 -4.15788 | overlap 3902370 GTCGCTGGGCGTTTA CGACGC GGT GCGCCG TTTGTTAGGACGGTT uhpB 3901294 - 3902796 + | sensory histidine kinase UhpB TERM 4885 3903843 - 3903855 + G 73 -9.1 -3.65581 | TGCCAGCTACGTGAT GCAGG CAA CCTGC TTCTTCACCATTGGT uhpC 3902806 - 3904125 + | regulatory protein UhpC TERM 4886 3904830 - 3904844 + G 70 -6.4 -4.20368 | overlap 3904819 TACCTGTTCGATGGC CATGTC ATC GGCATG TTTATCTTCCCGTCG uhpT 3904263 - 3905654 + | sugar phosphate antiporter TERM 4887 3905673 - 3905691 + T 100 -13.1 -5.95946 | TAACTGGTGACTTTT GCCCGGC ATGAC GCCGGGC TTTTTTTATTATTCC yicP 3907466 - 3905700 - | cryptic adenine deaminase TERM 4888 3907445 - 3907467 + g 77 -2.8 -5.09245 | TAATGTGATGAAATT TATGGTTAAT GGA ATTATTCATA TTTTTCTCATTTTGA yicO 3907563 - 3908975 + | hypothetical protein yicN 3909001 - 3909480 + | hypothetical protein TERM 4889 3909724 - 3909714 - g 77 -8.2 -4.09864 | ATTTATTGCCGAAAA CCGC GGC GCGG ATGCCATCACCCGAC TERM 4890 3909889 - 3909905 + G 75 -5.1 -4.67607 | overlap 3909890 ACCGTGACCGCCTTT GTGGCAA TGT TTGCCAG TTTGTTTATTACCCA TERM 4891 3910112 - 3910147 + G 72 -6.8 -4.20368 | gap 1, overlap 3910108 3910081 3910139 TGGTACCGCCGCGTA CGGTGCCGAAGG-CGCT GTC GGTGATCTTCGGCGCGG TTTCTATTGCGCTGG nepI 3909691 - 3910881 + | ribonucleoside transporter SF3800 3911215 - 3910922 - | putative transport protein SF3801 3911470 - 3911772 + | IS600 ORF1 SF3802 3911808 - 3912626 + | IS600 ORF2 SF3803 3913173 - 3912667 - | putative secreted autotransporter toxin SF3804 3914700 - 3913711 - | serine protease SF3805 3914802 - 3915167 + | insertion sequence 2 OrfA protein SF3806 3915125 - 3916030 + | insertion element IS2 transposase InsD lpfA 3917368 - 3916796 - | putative major fimbrial subunit TERM 4892 3917407 - 3917429 + r 73 -4.3 -4.8622 | gap 1, opp_overlap 3917407 3917409, overlap 3917410 TCCTTTACCATGAAT CATCACTTAT ATTA ATAAGTG-TG TTTTTGATTCAAAGG TERM 4893 3917410 - 3917427 + r 71 -7.1 -4.05402 | opp_overlap 3917409 3917407, overlap 3917407 TTTACCATGAATCAT CACTTAT ATTA ATAAGTG TGTTTTTGATTCAAA TERM 4894 3917649 - 3917678 + r 89 -9.3 -4.59109 | opp_overlap 3917650, overlap 3917641 3917651 CACCGGTCGGCAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4895 3917677 - 3917650 - R 81 -12.8 -3.14211 | opp_overlap 3917641 3917649 3917651 ACCGGTCGGCAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 4896 3917651 - 3917676 + r 100 -16.3 -3.90762 | opp_overlap 3917650, overlap 3917641 3917649 CCGGTCGGCAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SF3808 3919006 - 3917660 - | IS4 orf TERM 4897 3919021 - 3918996 - G 100 -9.8 -5.61596 | opp_overlap 3918996 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4898 3918996 - 3919021 + g 73 -9.1 -3.61398 | opp_overlap 3918996 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC glmS 3920938 - 3919109 - | D-fructose-6-phosphate amidotransferase TERM 4899 3920107 - 3920141 + g 93 -6.4 -5.27923 | gap 1, opp_overlap 3920106 3920110, overlap 3920110 CCAGCTCGCTTAAAT CAACCTGACCGTGGC TGATGC GCC-CGGTAAGGGTG TTTTTTATCGCGTTC glmU 3922470 - 3921100 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 4900 3921708 - 3921695 - G 70 -5.2 -4.34402 | overlap 3921696 CCGCGCAGATCAAAA CGCG CCGGAT CGCG CAGCATAACGCCTGC TERM 4901 3921720 - 3921732 + g 84 -7.7 -4.62302 | CGCGCAGCATAACGC CTGCT AAC AGCAG TTTTTCAGCCTGTTC TERM 4902 3922772 - 3922803 + r 73 -10.2 -3.08032 | opp_overlap 3922777, overlap 3922777 CGGGTCAACGCGTAA AAAAAGCCAGCCTG TTTC CAGACTGGCTTTTG TGCTTTTCAAGCCGG TERM 4903 3922777 - 3922798 + r 93 -10.1 -4.67635 | opp_overlap 3922777, overlap 3922772 CAACGCGTAAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA TERM 4904 3922798 - 3922777 - R 100 -12.3 -5.43866 | opp_overlap 3922777 3922772 CAACGCGTAAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA atpC 3923234 - 3922821 - | F0F1 ATP synthase subunit epsilon atpD 3924643 - 3923261 - | F0F1 ATP synthase subunit beta TERM 4905 3924410 - 3924433 + g 76 -7.4 -4.18018 | CGCTTTACCTACCGG GACTTCGATC GGGT GTTCGAGGTC TTTTACATCCAGACC atpG 3925533 - 3924670 - | F0F1 ATP synthase subunit gamma TERM 4906 3925358 - 3925391 + g 100 -14.7 -3.91897 | opp_overlap 3925358 TTATATTCCAGATTA CCGTGTGCAAGGTGA CCAA TCACTTTGCGCATGG TTTCTGCATAAGGAC atpA 3927125 - 3925584 - | F0F1 ATP synthase subunit alpha TERM 4907 3926563 - 3926599 + g 78 -8.7 -4.26188 | overlap 3926564 CATTTGATACCGGAA TCGCGCTGGTTGATGAT GGC ATCGATAGCCAGTGCGG TTTTACCTGTCTGAC TERM 4908 3926564 - 3926598 + g 70 -10 -3.15231 | overlap 3926563 ATTTGATACCGGAAT CGCGCTGGTTGATGAT GGC ATCGATAGCCAGTGCG GTTTTACCTGTCTGA atpH 3927671 - 3927138 - | F0F1 ATP synthase subunit delta TERM 4909 3927497 - 3927541 + g 72 -5.1 -4.50686 | gap 3, opp_overlap 3927492 3927495, overlap 3927492 3927498 CTGCGATAAACGACT CGGC-GAGCGT-T-TCTGGCGC AAGC GCGCCAGAGAGAAGCTCTGCCA TTTGTTCGTTTTTGG atpF 3928156 - 3927686 - | F0F1 ATP synthase subunit B TERM 4910 3928030 - 3928051 + g 70 -3.7 -4.67353 | CTGCGGAAGCAAGGC CGTCAGCAA TTTC TTTTTGACG TTTTTCGATGGCTGC TERM 4911 3928057 - 3928085 + g 73 -11.8 -2.77899 | gap 1, overlap 3928054 CTTTTTGACGTTTTT CG-ATGGCTGCCA TTAA TGGCGGCCATACG TACTTCATGCAGAAC atpE 3928457 - 3928218 - | F0F1 ATP synthase subunit C atpB 3929319 - 3928504 - | F0F1 ATP synthase subunit A TERM 4912 3929006 - 3928986 - G 74 -11.1 -3.17527 | overlap 3928973 3928984 GATTCATCAGGAATA CCCAGACGA AGA TCGTCAGGG CCAGCGGAGCAATCA atpI 3929708 - 3929328 - | F0F1 ATP synthase subunit I TERM 4913 3930237 - 3930200 - R 86 -5.2 -5.52384 | gap 3, overlap 3930228 TGCTTACCAAAAAAA GCCACGTT-A-TCTTGTTG ATG CAA-AAGAGTGAACGTGGC GTTAAATGTAACCAG gidB 3930948 - 3930325 - | glucose-inhibited division protein B TERM 4914 3930973 - 3931000 + r 100 -18.6 -4.77759 | overlap 3930997 3930998 CTGTTCTTGATGCGT TGCCTGGTAAGC GGGT GCTTACCAGGCA TTTTTAATGCGTTAT gidA 3932901 - 3931012 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 4915 3932035 - 3932052 + g 70 -6.3 -4.21607 | gap 1, overlap 3932038 CTGATGCTGATTTCT GTC-TGCG AAG CGCATGAC TTTGTCTTCGATCGA mioC 3933723 - 3933280 - | flavodoxin asnC 3934271 - 3933813 - | DNA-binding transcriptional regulator AsnC TERM 4916 3934732 - 3934677 - g 100 -17.1 -2.75074 | gap 2 CTTAGGGCAACACGA CTTCAGCGCGGGCGAAGGGCTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGTCTTTCTCCGT asnA 3934423 - 3935415 + | asparagine synthetase AsnA yieM 3936871 - 3935420 - | hypothetical protein TERM 4917 3936505 - 3936493 - G 75 -4.8 -4.84017 | AACGCTGGAGAAAAA GCGT GTGTA ACGC TGAAGTTATTGTGCT yieN 3938385 - 3936865 - | regulatory ATPase RavA TERM 4918 3938137 - 3938118 - G 71 -2.9 -4.75404 | gap 1 AAAGGGGACCAAAAA CTTCTTCC GGCGT GGA-GAAG CGGGTCATCAGATAT TERM 4919 3938502 - 3938527 + H 100 -9.8 -5.61596 | opp_overlap 3938502 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 4920 3938527 - 3938502 - H 72 -9.1 -3.61398 | opp_overlap 3938502 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SF3827 3938517 - 3939863 + | IS4 orf TERM 4921 3939874 - 3939845 - f 89 -9.3 -4.59109 | opp_overlap 3939846, overlap 3939847 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCAAAGGGGGGG TERM 4922 3939846 - 3939873 + F 81 -12.8 -3.14132 | opp_overlap 3939845 3939847 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCAAAGGGGGG TERM 4923 3939872 - 3939847 - f 100 -16.3 -3.90762 | opp_overlap 3939846, overlap 3939845 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCAAAGGGGG TERM 4924 3939949 - 3939963 + F 79 -4.2 -5.24129 | overlap 3939948 ATTTTGCCGTTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 4925 3940150 - 3940173 + G 76 -3.8 -4.88736 | overlap 3940147 3940146 CAGTTTGGTTTTGGC GTTGAACGCG ATGC CGTGTTTGGC TTTTTATCGCTGATC trkD 3940021 - 3941889 + | potassium transport protein Kup TERM 4926 3941897 - 3941921 + F 100 -9.3 -5.50723 | AAATCTAACGCCAGA CGCCTCCTT TCTTCAT AAGGGGGCG TTTTTGTTTTCATGG TERM 4927 3942414 - 3942444 + G 75 -11.3 -3.00907 | gap 1, overlap 3942408 3942423 3942442 AAAGTCAGGCGGTAA TTCGCA-GCGGAGA ATGT TCTCCGTATGCGAA TATCATTCTCTGTGC rbsD 3942056 - 3942475 + | D-ribose pyranase TERM 4928 3942548 - 3942537 - f 71 -7.2 -4.07568 | TTCCCGGGCGTAAAA GCCC TCTC GGGC GCAGCGTTAAATGTC insA 3942890 - 3943165 + | IS1 ORF1 insB 3943192 - 3943587 + | IS1 ORF2 rbsC 3944769 - 3945734 + | ribose ABC transporter permease protein TERM 4929 3946731 - 3946755 + F 90 -9.9 -4.38712 | opp_overlap 3946727 3946724, overlap 3946732 AAGAAAAGCAGGGCA CGCGCCACCCT AAC ACGGTGGCGCA TTTTATGGACATCCC TERM 4930 3946732 - 3946754 + F 83 -13.4 -3.22906 | opp_overlap 3946727 3946724, overlap 3946731 AGAAAAGCAGGGCAC GCGCCACCCT AAC ACGGTGGCGC ATTTTATGGACATCC rbsK 3946760 - 3947704 + | ribokinase TERM 4931 3947728 - 3947744 + G 72 -7.9 -3.91897 | overlap 3947729 TACAATGAAAGATGT TGCCCGT TTG GCGGGCG TTTCTACCTCAACAG rbsR 3947717 - 3948700 + | transcriptional repressor RbsR yieO 3950069 - 3948666 - | putative transport protein yieP 3950664 - 3950116 - | hypothetical protein TERM 4932 3952902 - 3952889 - R 75 -6.7 -4.41177 | overlap 3952893 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 4933 3953128 - 3953104 - R 71 -8 -3.93061 | gap 1, opp_overlap 3953111 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 4934 3953682 - 3953670 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 4935 3956171 - 3956150 - R 74 -8.7 -3.91196 | CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTAGC TERM 4936 3956523 - 3956542 + r 100 -5.8 -6.02914 | gap 1, opp_overlap 3956523 3956540 CCCCTGCCGAAATCA TCCTTAGCG AAA CG-TAAGGA TTTTTTTTATCTGAA yifA 3957451 - 3956612 - | transcriptional regulator HdfR TERM 4937 3956809 - 3956826 + g 72 -9.9 -3.31144 | CAATCTGTTGCTGTG CCAGTTC AGCA GAACTGG TTGTCAGAATGGGAA yifE 3957570 - 3957908 + | hypothetical protein TERM 4938 3957915 - 3957927 + F 93 -6.9 -5.72616 | opp_overlap 3957915 3957909 GACGATTAATAAAAA GGGCG AAA TGCCC TTTTTTTATGTCAGT TERM 4939 3957927 - 3957915 - f 85 -6.2 -5.15167 | opp_overlap 3957915, overlap 3957909 GACGATTAATAAAAA GGGC GAAAT GCCC TTTTTTTATGTCAGT TERM 4940 3959663 - 3959640 - f 76 -4 -5.00616 | opp_overlap 3959646 TTTCTTTTTAAAAAA CAACAATTTC TATT GAAATTATTA AAGCCATCATAAAAA ilvL 3959764 - 3959862 + | ilvG operon leader peptide TERM 4941 3959912 - 3959885 - f 79 -11.2 -3.45366 | opp_overlap 3959887, overlap 3959870 3959887 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTGACCTTAAAA TERM 4942 3959887 - 3959910 + F 100 -13.8 -5.47399 | opp_overlap 3959885 3959887 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTGACCTTAA TERM 4943 3959910 - 3959887 - f 86 -13.8 -3.29727 | opp_overlap 3959887, overlap 3959885 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTGACCTTAA TERM 4944 3960804 - 3960815 + G 70 -5.8 -4.25283 | TGACCTGCTGATCGC CGTG GGTG CACG TTTTGATGACCGGGT ilvG 3960001 - 3961647 + | acetolactate synthase 2 catalytic subunit ilvM 3961647 - 3961907 + | acetolactate synthase 2 regulatory subunit TERM 4945 3961914 - 3961897 - f 72 -5.5 -4.3767 | overlap 3961899 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAATATAAAAATG ilvE 3961927 - 3962856 + | branched-chain amino acid aminotransferase TERM 4946 3962888 - 3962867 - f 100 -12.3 -5.61913 | opp_overlap 3962867 AATAAATACAAAAAA TGGGACGGC ACGC ACCGTCCCA TTTACGAGACAGACA TERM 4947 3962867 - 3962888 + F 86 -11.6 -3.53012 | opp_overlap 3962867 AATAAATACAAAAAA TGGGACGG CACGCA CCGTCCCA TTTACGAGACAGACA ilvD 3962921 - 3964771 + | dihydroxy-acid dehydratase TERM 4948 3965018 - 3965008 - g 79 -2.4 -5.30348 | ACGGAAGAACAAAAA GCGC ACG GCGT GATCACTGCTTCTGC TERM 4949 3965041 - 3965058 + G 71 -3.3 -4.77165 | gap 1, opp_overlap 3965043, overlap 3965043 GCTTCTGCGGGTAAC CACG-CGC AGG GCGTCGCG TTTTCTTCTGCGCGG ilvA 3964774 - 3966318 + | threonine dehydratase ilvY 3967205 - 3966315 - | DNA-binding transcriptional regulator IlvY TERM 4950 3966353 - 3966369 + g 95 -9.4 -4.82901 | opp_overlap 3966343 3966353, overlap 3966343 AGAATGCCTCAATTA GCGGCT CATGT AGCCGC TTTTTCTGCGCACAC TERM 4951 3967097 - 3967065 - G 72 -7.6 -3.86897 | GTTATCGCGCACAAA CAGCGGCTGGCCGA GATCT TCTTCCAGGCGCTG AATCTGCCGTGAGAG TERM 4952 3967171 - 3967156 - G 83 -10.4 -4.07568 | opp_overlap 3967146 3967162 3967162 GCGCTGCGGCCAAAA TGGCGG CTTT CCGCCA GATGCAGGAAGGTTT ilvC 3967355 - 3968830 + | ketol-acid reductoisomerase TERM 4953 3968845 - 3968873 + T 100 -16.1 -3.24825 | overlap 3968846 3968849 ATAGCGATTCAGAGT TCAAGGCCTTCTC CCG GAGAAGGCCTTGC TATTAGTTACGGTAC TERM 4954 3968846 - 3968872 + T 100 -19.6 -2.54574 | overlap 3968845 3968849 TAGCGATTCAGAGTT CAAGGCCTTCTC CCG GAGAAGGCCTTG CTATTAGTTACGGTA TERM 4955 3968849 - 3968869 + T 100 -15.5 -3.42147 | overlap 3968846 3968845 CGATTCAGAGTTCAA GGCCTTCTC CCG GAGAAGGCC TTGCTATTAGTTACG ppiC 3969157 - 3968876 - | peptidyl-prolyl cis-trans isomerase C (rotamase C) TERM 4956 3969888 - 3969866 - g 71 -2.7 -4.77165 | gap 1 GCTGGCAGAACAAAA TTCG-CTACC TGCT GGTGGACGAA TATCAGGACACCAAC TERM 4957 3970782 - 3970755 - g 84 -10.6 -3.72592 | AATGCGCATGAAGAA CGTCAACCAACT GTTT AGCTGGATGACG GAGATGCTGGAAGGC TERM 4958 3971101 - 3971086 - g 81 -10.4 -3.90922 | ACGCTGTGTAAAGAA CGCCGT CAGT ACGGCG AACTGGTGCGCCCGG rep 3969244 - 3971265 + | ATP-dependent DNA helicase Rep TERM 4959 3971302 - 3971271 - T 72 -10.8 -2.76911 | opp_overlap 3971270 3971270, overlap 3971270 3971266 3971267 3971263 AGGGAAATAATCAAG GCCGGAGAAGATGC GTCA GCATCGCATCCGGC ACTTACTCATTAATG TERM 4960 3971330 - 3971354 + T 72 -6.5 -4.2558 | gap 1 ATGCACTTCCAGCGG CCAGTGGACA TAGCTC TG-CCACTGG TTTTCCTGAGCAATA gppA 3972796 - 3971312 - | guanosine pentaphosphate phosphohydrolase TERM 4961 3971991 - 3971974 - G 93 -9.9 -4.57569 | TCAGTTCGGTAAAAA TGGCGAT CAGG ATCGCCA GACCACTCGGGAACA rhlB 3974195 - 3972930 - | ATP-dependent RNA helicase RhlB TERM 4962 3973447 - 3973465 + g 100 -7.4 -5.5604 | overlap 3973448 CACTCTTCTTCGATC AGCGTTTG CAG CAAACGCA TTTTTTCTTCGTTAG TERM 4963 3973448 - 3973464 + g 86 -10.9 -3.91997 | overlap 3973447 ACTCTTCTTCGATCA GCGTTTG CAG CAAACGC ATTTTTTCTTCGTTA trxA 3974272 - 3974655 + | thioredoxin rhoL 3974796 - 3974897 + | putative Rho operon leader peptide TERM 4964 3975385 - 3975373 - g 70 -4.1 -4.63486 | ACGCCCGCAACAAAA TCCTC TTT GAGAA CTTAACCCCGCTGCA rho 3974982 - 3976241 + | transcription termination factor Rho TERM 4965 3976256 - 3976285 + G 95 -13.7 -3.38183 | opp_overlap 3976261, overlap 3976261 AATTTGTCTTATGCC AAAAACGCCACGT GTTT ACGTGGCGTTTTG CTTTTATATCTGTAA TERM 4966 3976261 - 3976280 + G 100 -13.6 -4.75518 | opp_overlap 3976261, overlap 3976256 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC TERM 4967 3976280 - 3976261 - g 100 -13.6 -4.62069 | opp_overlap 3976261 3976256 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC SF3857 3976251 - 3976469 + | hypothetical protein TERM 4968 3976501 - 3976517 + G 100 -8.1 -5.7946 | TTTACTGACAGTGAG TACTGAT CTC ATCAGTA TTTTTTTATTCACGA TERM 4969 3976922 - 3976960 + G 89 -14 -3.14881 | opp_overlap 3976930, overlap 3976908 3976930 TTTGCCGTCTGGGCG GCCATTAATGCGTTCAAC ATG GTTGATGGCATTGATGGC TTGCTGGGCGGGTTG TERM 4970 3977547 - 3977537 - g 70 -6.8 -4.11751 | overlap 3977527 ATTAAGCGCGTAAAA CGCA GAC TGCG TAGAAATCGTGGTGG rfe 3976481 - 3977584 + | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase TERM 4971 3978010 - 3977990 - g 72 -11.1 -3.02144 | opp_overlap 3977994 3977995, overlap 3977995 GGATGGTGGGCAACA GCAAAGCCG ATG CGGCGTTGC TGGATGAAATGATTA TERM 4972 3978005 - 3977995 - g 74 -8.2 -3.92324 | opp_overlap 3977995 3977994, overlap 3977990 GTGGGCAACAGCAAA GCCG ATG CGGC GTTGCTGGATGAAAT wzzE 3977596 - 3978642 + | lipopolysaccharide biosynthesis protein WzzE TERM 4973 3978653 - 3978678 + F 100 -18.3 -3.61517 | opp_overlap 3978642 3978646 3978649 AATAGCAACACTGCT GCGGTGAGCGC AAAG GCGCTCGCCGC TTATTCGAAGAGAAT TERM 4974 3979389 - 3979371 - g 78 -8.9 -4.15044 | GTGGCTTTGAAGAAA TCTGCCA CGCGC TGGCAGA CATCGCCACCACGCA wecB 3978656 - 3979828 + | UDP-N-acetyl glucosamine-2-epimerase TERM 4975 3980003 - 3980018 + G 76 -3.9 -5.00616 | CGAGCGTAGTAAAAA CTGCC GTAGAA GGCGG TTTTTTACGAGCGAG TERM 4976 3980480 - 3980495 + G 70 -5.4 -4.31692 | CCGAAAACAGCTTCC GCGATG TGAA TATCGC TTTTGCTAATGAATT wecC 3979825 - 3981087 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 4977 3981609 - 3981579 - g 74 -7.5 -4.07885 | gap 1 TATTCCGCGTCAAAA GCCAGCAGCG-ACC ATCT GGTGCGCGCCTGGC TGCGGACCTACGGTC rffG 3981087 - 3982154 + | dTDP-glucose 4,6-dehydratase TERM 4978 3982425 - 3982439 + G 72 -7.8 -3.97947 | opp_overlap 3982412 CAGCCCAGCCCGGAC GGTCTG GCG CAGGCC TTTATCATCGGTGAA rffH 3982173 - 3983054 + | glucose-1-phosphate thymidylyltransferase TERM 4979 3983431 - 3983418 - g 76 -8.1 -4.19258 | opp_overlap 3983421 3983422 ACAGTGGATTGAAAA TGCCG TGCG CGGCA CCTTTGATCATCAAT wecD 3983161 - 3983706 + | TDP-fucosamine acetyltransferase TERM 4980 3983810 - 3983838 + G 81 -9.6 -4.07568 | gap 1, opp_overlap 3983837, overlap 3983837 GATGGCGGTTTTACC CGTCGCTGCCAGC AGTG GCTGG-AGCAACG TTTTGGCAGCGCCAA wecE 3983711 - 3984841 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 4981 3984957 - 3984977 + G 76 -11.1 -3.36289 | CCGGCGGGGCTTGGG CTGGCGGCA AAT TTCCGCCAG TTGATTACCGTGCTC wzxE 3984843 - 3986093 + | putative cytochrome TERM 4982 3986142 - 3986152 + G 72 -4.6 -4.65895 | overlap 3986114 CTCACCATAACCGAA CCGT TTT GCGG TTTTTCAATGACGCG TERM 4983 3986363 - 3986398 + G 85 -6.8 -4.8667 | overlap 3986393 AATCCCACACTGTGG CTGGCTCTGCTGAGTG GTGG CATTAAGCCCAGCCAG TTTTTCTGGCATATC TERM 4984 3986445 - 3986459 + G 71 -2.1 -5.02074 | ATGAGCTTTCCAGTG GCTTG AGATA TAAGC TTTTTTACCCACTAC TERM 4985 3986559 - 3986544 - g 70 -6.8 -4.07568 | overlap 3986555 GCTTTTTTGCCAAAA CACACC CAAA GGTGCG GGGAGAACTGCTGTA yifM 3986090 - 3987169 + | 4-alpha-L-fucosyltransferase TERM 4986 3987631 - 3987648 + G 71 -3.3 -4.80167 | overlap 3987634 AGTGAAGTCTCCGGC GTGGCGT TAAA ACGCTTC TTTTACTTTTTCATC TERM 4987 3987634 - 3987645 + G 74 -5.8 -4.47007 | overlap 3987631 GAAGTCTCCGGCGTG GCGT TAAA ACGC TTCTTTTACTTTTTC TERM 4988 3987699 - 3987714 + G 71 -3.2 -4.77036 | CTTTCTGCGCCAGGA CAGCAA AGCG TGGCTG TTTTTCCTCGTCAGC wecF 3987166 - 3988518 + | putative entero common antigen polymerase TERM 4989 3988801 - 3988766 - g 77 -6 -4.68593 | gap 1, opp_overlap 3988769, overlap 3988769 TTCAGTACGTAAAAA GTACCCGCAGGCGCAGG TTT CCCGCGT-TGCCGGTGC CGATCTCTGGGAAGA wecG 3988521 - 3989261 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4990 3989279 - 3989304 + F 71 -9.7 -3.18764 | opp_overlap 3989280, overlap 3989277 3989275 TTCCTCTCTTTGTAA AGCGACGGAGT GGTC ACTTCGTCGCC TGTCTGCTTTTTTAT TERM 4991 3989303 - 3989280 - f 82 -11 -3.53012 | opp_overlap 3989279 3989277 3989275 TCCTCTCTTTGTAAA GCGACGGAGT GGTC ACTTCGTCGC CTGTCTGCTTTTTTA TERM 4992 3989423 - 3989411 - f 72 -9.1 -3.57039 | TACCCATAACGATAA CCGGT AAC ACCGG AAAGCATGCAAACAC TERM 4993 3989778 - 3989788 + G 77 -8.2 -4.08164 | opp_overlap 3989777 3989774 GATCTCAGAAATCAC CGCC ATT GGCG TTTATGTCCAGTTTT TERM 4994 3989944 - 3989924 - g 71 -10.5 -2.87051 | opp_overlap 3989924, overlap 3989923 TCGCGATGATCAAAG TCACCACGA TTA TCGTGATGA TTGTCATTGGCCTGG TERM 4995 3990415 - 3990399 - g 72 -5.7 -4.58395 | CGCACTGGCGAAAAA CCGTCAG TTA CCGGCGG CAATGGCAAAAGTTT yifK 3989452 - 3990705 + | putative transport protein YifK TERM 4996 3991384 - 3991399 + F 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT aslB 3991522 - 3992757 + | putative arylsulfatase regulator TERM 4997 3992780 - 3992762 - T 84 -5.2 -5.37865 | TGAATAAGTAAAAAA GCGGCC ATTTGGA AGCCGC CTGCGGTTGATTGCC SF3872 3993832 - 3992927 - | insertion element IS2 transposase InsD SF3873 3994155 - 3993790 - | insertion sequence 2 OrfA protein TERM 4998 3994455 - 3994445 - R 72 -2.6 -4.91459 | opp_overlap 3994445 TAATAGTGACAAAAA TAAA TTA TTTA TTTATCCAGAAAATG TERM 4999 3994937 - 3994962 + r 100 -11.9 -5.64274 | ACAGACCTGTTTTAA CGCCTGCTC CGTAATAA GAGCAGGCG TTTTTTTATGCATCA hemY 3996213 - 3995017 - | putative protoheme IX biogenesis protein hemX 3997433 - 3996216 - | putative uroporphyrinogen III C-methyltransferase TERM 5000 3997046 - 3997071 + g 70 -3.9 -4.68103 | overlap 3997048 GCAGCCAGGTTTTAG CATCGCTGCCG GAAA TGGTGGCGATC TTTTGTTGGACTTCA TERM 5001 3997179 - 3997190 + g 70 -3.6 -4.62336 | CAGCTCGGCTTTTTG GCTC TCCT GGGC TTTTTGCAATGCCGT hemD 3998195 - 3997455 - | uroporphyrinogen-III synthase hemC 3999133 - 3998192 - | porphobilinogen deaminase TERM 5002 4000019 - 3999996 - g 76 -7.4 -4.2828 | CCTGATTGATGAAAA CCGCTTCCGT CATA ATGAAAGCGG CAGCCTGGGGGGCGA TERM 5003 4001527 - 4001543 + G 71 -9.3 -3.53811 | CGCCTTTCCAGCACC CGCCAGG AAA CCGGGCG TTTCAAGGCGCTGCG TERM 5004 4001682 - 4001662 - g 75 -6.8 -4.30987 | overlap 4001658 ATTTCGCATAACAAA CTGCACGG CTTGT CAGTGCAG GTTGAAACCAATCAC cyaA 3999520 - 4002066 + | adenylate cyclase cyaY 4002426 - 4002106 - | frataxin-like protein insA 4002955 - 4003230 + | IS1 ORF1 SF3883 4004564 - 4003587 - | hypothetical protein insB 4003257 - 4003652 + | IS1 ORF2 SF3884 4004866 - 4004561 - | hypothetical protein SF3885 4005925 - 4004888 - | hypothetical protein yifL 4006228 - 4006431 + | putative outer membrane lipoprotein dapF 4006468 - 4007292 + | diaminopimelate epimerase yigA 4007289 - 4007996 + | hypothetical protein TERM 5005 4008347 - 4008331 - g 72 -5.1 -4.57569 | opp_overlap 4008316 TCATCTGCCGAAAAA TATCGAC GTC GACGATA TGAATCGGCTGCTGG TERM 5006 4008577 - 4008608 + G 79 -5 -4.96848 | overlap 4008548 4008606 GCACTGGCTTGATTT GCGCGACCTGTTTG GTAG CGAAGACGACGCGC TTTTTCTGTCGAAAC xerC 4007993 - 4008889 + | site-specific tyrosine recombinase XerC yigB 4008889 - 4009605 + | flavin mononucleotide phosphatase TERM 5007 4009753 - 4009731 - g 82 -9 -4.1523 | opp_overlap 4009739 CTTAATGACAAACAA CGCGAAGCGG TGG CCGCGCCACG CAGCAACCTTCTGGT TERM 5008 4009739 - 4009761 + G 71 -9 -3.44051 | opp_overlap 4009731 CAAACAACGCGAAGC GGTGGCCGCG CCA CGCAGCAACC TTCTGGTGCTGGCGG uvrD 4009689 - 4011851 + | DNA-dependent helicase II TERM 5009 4011865 - 4011877 + F 77 -9.1 -3.9392 | AACGTTGCCGGATGC GGTGC TGC GCACC TTATTTGGCCTAAAA TERM 5010 4012195 - 4012181 - f 74 -3.5 -5.06414 | CTGGCTCAACAAAAA CACGG CATTC CCATG TTTATTAATCCCAAC TERM 5011 4012490 - 4012515 + F 100 -9.8 -5.61596 | opp_overlap 4012490 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 5012 4012515 - 4012490 - f 72 -9.1 -3.61398 | opp_overlap 4012490 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SF3892 4012505 - 4013851 + | IS4 orf TERM 5013 4013862 - 4013833 - f 89 -9.3 -4.59109 | overlap 4013835 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACCTTCTGCTGA TERM 5014 4013860 - 4013835 - f 100 -16.3 -3.90762 | overlap 4013833 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACCTTCTGCT TERM 5015 4014207 - 4014220 + F 86 -3.1 -5.70829 | overlap 4014218 ATGCGCCATTATAGG TCCTA GATG TGGGA TTTTTTTATCCTGTT corA 4014570 - 4015520 + | magnesium/nickel/cobalt transporter CorA TERM 5016 4015562 - 4015524 - T 78 -6.1 -4.57341 | gap 2, opp_overlap 4015529 4015530, overlap 4015527 4015528 4015529 AACTGGTTGTAAAAA GAA-GGC-GGTGGCTTAGC CTG GCTAAGCCACCTGTTATTC AAAGGCTCCAGGTAT TERM 5017 4015557 - 4015527 - T 81 -8.2 -4.40561 | opp_overlap 4015529 4015530, overlap 4015524 4015528 4015529 TGGTTGTAAAAAGAA GGCGGTGGCTTAGC CTG GCTAAGCCACCTGT TATTCAAAGGCTCCA TERM 5018 4015556 - 4015528 - T 79 -11.7 -3.23855 | opp_overlap 4015529 4015530, overlap 4015527 4015524 4015529 GGTTGTAAAAAGAAG GCGGTGGCTTAGC CTG GCTAAGCCACCTG TTATTCAAAGGCTCC TERM 5019 4015529 - 4015556 + T 100 -15 -3.62046 | gap 1, opp_overlap 4015529 4015528 4015527 4015524, overlap 4015530 GTTGTAAAAAGAAGG C-GGTGGCTTAGC CTG GCTAAGCCACCTG TTATTCAAAGGCTCC TERM 5020 4015555 - 4015529 - T 90 -15.2 -2.53831 | opp_overlap 4015529 4015530, overlap 4015528 4015527 4015524 GTTGTAAAAAGAAGG CGGTGGCTTAGC CTG GCTAAGCCACCT GTTATTCAAAGGCTC TERM 5021 4015530 - 4015554 + T 100 -18.7 -3.38991 | opp_overlap 4015529 4015528 4015527 4015524, overlap 4015529 TTGTAAAAAGAAGGC GGTGGCTTAGC CTG GCTAAGCCACC TGTTATTCAAAGGCT yigF 4015941 - 4015561 - | hypothetical protein yigG 4016371 - 4015955 - | hypothetical protein TERM 5022 4016377 - 4016406 + r 100 -9.4 -5.04385 | opp_overlap 4016379, overlap 4016405 CTGTCAGCATGGCAA TATGCCCACTCT CATACA AGAGTCGGCATA TTTTTTCAGAATATA rarD 4017320 - 4016430 - | hypothetical protein TERM 5023 4016511 - 4016499 - G 82 -7.7 -4.46112 | opp_overlap 4016498 4016499 CGCCACCCAAATAAA GGTGA AAG TCACC ATCTTATCGGCACCC TERM 5024 4016518 - 4016528 + g 72 -4.6 -4.59773 | AAAGTCACCATCTTA TCGG CAC CCGG TTTTTCACCATAAAA TERM 5025 4016614 - 4016592 - G 74 -2 -5.10497 | gap 1, overlap 4016608 AATGTACTGAAAAAA GCCTAACGT TGAGAG ACGC-AGGC GCGTGGCAGCGGCAG TERM 5026 4016897 - 4016884 - G 75 -6.7 -4.43477 | GGTAGCGAACCAAAA GTCCA CAGC TGGAC CAACACGCCACATAT TERM 5027 4017216 - 4017183 - G 85 -3.1 -5.40464 | gap 1, overlap 4017191 CACCATAAAGAAAAA CGACCAGATCACG-CG ATG CGTCAGGATCTCATCG GCGGGCACGTAGTAA TERM 5028 4017306 - 4017271 - G 74 -3.2 -4.89521 | gap 1, opp_overlap 4017273 4017274, overlap 4017274 ATACCCCAAATAAAA TAAGCGGCAAGAGCG AGTAATA CGC-CCTGCCGCGTT TGTTTTGCATCCATC TERM 5029 4017273 - 4017304 + g 70 -3.6 -4.68908 | gap 1, opp_overlap 4017271 4017274, overlap 4017274 ACCCCAAATAAAATA AGCGGCAAGAGCG AGTAATA CGCCCT-GCCGCG TTTGTTTTGCATCCA TERM 5030 4017303 - 4017274 - G 90 -9.3 -4.54026 | gap 1, opp_overlap 4017274 4017273, overlap 4017271 CCCCAAATAAAATAA GCGGCAAGAGCG AGTAATA CGC-CCTGCCGC GTTTGTTTTGCATCC TERM 5031 4017349 - 4017361 + r 72 -4.8 -4.67943 | opp_overlap 4017349, overlap 4017342 4017344 TTTTAATTGGTAACA GCAG TTTAC CTGC TTTTATGTCTTCAAC yigI 4017839 - 4017372 - | hypothetical protein pldA 4018004 - 4018873 + | phospholipase A TERM 5032 4018957 - 4018978 + F 100 -12.3 -5.27335 | overlap 4018964 TTGCAGTTTCTCGCG CAGGCGCTG AAAA TAGCGCCTG TTTTTATTTCAGGCA TERM 5033 4020636 - 4020620 - g 71 -9.5 -3.5394 | opp_overlap 4020619 AAACTGTTCGCCAAA TTACGCA AAC TGCGTAA ATCGATTGCCGATGA recQ 4019000 - 4020835 + | ATP-dependent DNA helicase RecQ yigJ 4021151 - 4021519 + | hypothetical protein TERM 5034 4021540 - 4021576 + T 89 -8.8 -4.58395 | gap 1, opp_overlap 4021543 4021552, overlap 4021543 GACGCGTCTTCAGAG TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA TTTTTCACGCATGCC TERM 5035 4021572 - 4021543 - T 90 -14.3 -3.25823 | opp_overlap 4021540 4021543, overlap 4021552 GCGTCTTCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA TERM 5036 4021543 - 4021572 + T 79 -12.1 -3.23855 | opp_overlap 4021543 4021552, overlap 4021540 GCGTCTTCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA yigK 4021997 - 4021581 - | hypothetical protein TERM 5037 4023267 - 4023282 + G 74 -3.2 -5.00616 | opp_overlap 4023247 4023245 TGCGCTCAGTCGCGC TCCACG CCAT CGTTGA TTTTTTCAACAGGCA pldB 4022312 - 4023334 + | lysophospholipase L2 yigL 4023342 - 4024142 + | putative sugar phosphatase TERM 5038 4024179 - 4024223 + TF 77 -10.2 -3.47322 | gap 1 GTCAACCTGATACTT CGCTACAATGG-ATACTCGTT AATC AAAGAGTTTTCCATTGTGGCG TTACTTATCATCACC metR 4025958 - 4025005 - | regulator for metE and metH yigM 4024218 - 4025117 + | hypothetical protein TERM 5039 4025923 - 4025933 + gF 74 -6.8 -4.23434 | overlap 4025884 4025897 GCCGCAGTTCCGCAA CGCT TGT AGCG TTTTCAGGTGTTTTA TERM 5040 4026371 - 4026349 - g 70 -4.1 -4.71426 | gap 1, opp_overlap 4026369, overlap 4026353 CTGGGATCAACAAAA GCAAGCGGGT ATCG ACCTGCT-GC CGGTGGGCGATTTTG TERM 5041 4027264 - 4027250 - g 78 -5.7 -4.82901 | TTCGCCCTACAAAAA TGCCA TGAAC TGGCA CTGCTGCGCGATGCG TERM 5042 4028407 - 4028382 - g 74 -7.5 -4.07687 | overlap 4028400 ACTGTGGCCTGAAAA CGCGCGGCT GGCCAGAA ACCCGCGCG GCACTGGCGAACATG metE 4026194 - 4028455 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 5043 4028461 - 4028485 + T 100 -14.3 -4.5442 | opp_overlap 4028463, overlap 4028463 TCGGGGGTAAATCCA AACCGGGTGGT AAT ACCACCCGGTC TTTTCTCATTACAGC TERM 5044 4028483 - 4028463 - T 100 -16.9 -3.84451 | opp_overlap 4028461 4028463 GGGGGTAAATCCAAA CCGGGTGGT AAT ACCACCCGG TCTTTTCTCATTACA TERM 5045 4028463 - 4028483 + T 100 -16.9 -3.8823 | opp_overlap 4028463, overlap 4028461 GGGGGTAAATCCAAA CCGGGTGGT AAT ACCACCCGG TCTTTTCTCATTACA SF3908 4029375 - 4028494 - | putative enzyme TERM 5046 4029422 - 4029444 + H 72 -6.4 -4.28548 | opp_overlap 4029422 CCTGCAGAATGAAGA GTGATTTATG TGA TATGAATCAC TTTTGGTGGGTAAAT udp 4029571 - 4030332 + | uridine phosphorylase TERM 5047 4030352 - 4030368 + F 100 -9.4 -4.98672 | CTTCTCCTGTCTGAA GGCCGA CGCGT TCGGCC TTTTGTATTTTTGCG TERM 5048 4031088 - 4031074 - g 85 -7.1 -4.78839 | AAGGCGACAATAAAA CCCAG GGCAA CTGGG GCGAGGTAGTATTGA yigN 4030488 - 4031900 + | DNA recombination protein RmuC ubiE 4031995 - 4032750 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 5049 4032910 - 4032932 + G 76 -10.6 -3.29471 | overlap 4032911 TTCGACGTCATTGAT TCTGGTGTTC AGC GAACGCCAGG TTGATGTACTGGGCG TERM 5050 4032911 - 4032931 + G 73 -11.9 -2.57468 | overlap 4032910 TCGACGTCATTGATT CTGGTGTTC AGC GAACGCCAG GTTGATGTACTGGGC yigP 4032764 - 4033369 + | hypothetical protein TERM 5051 4033485 - 4033448 - g 83 -9.9 -4.1196 | gap 1, opp_overlap 4033448 4033451 AACTGATCCCCAAAA TGCGTATCACCCT-GCCG CTA CGGCTATGGCGATACTCA TTATTCTGGATGCCA ubiB 4033366 - 4035006 + | putative ubiquinone biosynthesis protein UbiB tatA 4035043 - 4035354 + | twin argininte translocase protein A SF3915 4035358 - 4035873 + | sec-independent translocase TERM 5052 4036214 - 4036226 + G 70 -4.8 -4.53303 | overlap 4036205 GCCGCTGCTGGTTTC CAGC TCTCT GCTG TTTTATATCGGCATG yigU 4035876 - 4036652 + | TatABCE protein translocation system subunit TERM 5053 4036679 - 4036654 - f 86 -8.9 -4.49364 | opp_overlap 4036656 4036659, overlap 4036655 4036656 4036659 AAACTGAAGAATAAA TTCAACCGCCC GTCA GGGCGGTTGTC ATATGGAGTACAGGA TERM 5054 4036678 - 4036655 - f 81 -12.4 -3.27992 | opp_overlap 4036656 4036659, overlap 4036654 4036656 4036659 AACTGAAGAATAAAT TCAACCGCCC GTCA GGGCGGTTGT CATATGGAGTACAGG TERM 5055 4036656 - 4036677 + F 90 -15.9 -2.63596 | opp_overlap 4036656 4036655 4036654 4036659, overlap 4036659 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5056 4036677 - 4036656 - f 90 -15.9 -2.5571 | opp_overlap 4036656 4036659, overlap 4036655 4036654 4036659 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5057 4036659 - 4036674 + F 82 -11.8 -3.47078 | opp_overlap 4036656 4036655 4036654 4036659, overlap 4036656 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA TERM 5058 4036674 - 4036659 - f 82 -11.8 -3.41554 | opp_overlap 4036659 4036656, overlap 4036656 4036655 4036654 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA yigW 4036694 - 4037476 + | DNase TatD rfaH 4037961 - 4037473 - | transcriptional activator RfaH TERM 5059 4037744 - 4037731 - G 72 -8.1 -3.95219 | GCCAAAGCGCACAAA GTGGC TGAC GCCAC GCGTAGCGCTGATGG TERM 5060 4038540 - 4038528 - g 85 -3.3 -5.4505 | overlap 4038529 CCTGCCAACAAAAAA TCGTC TCT GGCGA TGACGTCGATCTCAA TERM 5061 4038758 - 4038776 + G 70 -6.6 -4.04206 | TGGTGTGCGGCGCAT CCGGGCGA ACG TTTCCCGG TTTCTGTGGCGCTGG yigC 4038128 - 4039621 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 5062 4039626 - 4039614 - f 72 -6.2 -4.24123 | opp_overlap 4039613 4039609 4039614 TTAACAACGGTAAAA GCGC CTGAT GCGC GTTTGTTTTGCCCTA TERM 5063 4039727 - 4039750 + G 79 -3.7 -5.14626 | overlap 4039729 GATACCGTATATCGT GTCCGCATC GTGCCA GACGCGGCC TTTTCTTTTCGTGCT fre 4039667 - 4040368 + | FMN reductase TERM 5064 4040399 - 4040381 - T 100 -9.5 -5.76633 | TGAGATATAAAAAAA CCCGCCC CTGAC AGGCGGG AAGAACGGCAACTAA TERM 5065 4040468 - 4040501 + T 76 -11.7 -2.56596 | overlap 4040475 4040478 GCAATTGGTGCACGA TGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACATTGGTGCCGGA fadA 4041723 - 4040560 - | 3-ketoacyl-CoA thiolase fadB 4043922 - 4041733 - | multifunctional fatty acid oxidation complex subunit alpha TERM 5066 4042646 - 4042671 + g 79 -4 -5.16151 | gap 1, overlap 4042646 4042648 ATGGTTGAAGTGTTA G-ACGCCAGCA CGGTA TCCTGGCGTAC TTTTTGTTCGGTTTC TERM 5067 4043727 - 4043707 - G 76 -3.9 -4.91459 | overlap 4043708 GAACAGGGACAAAAA TTCGGTGAT ATC AGCACCGAC GATAAAGGCTGCTTT TERM 5068 4044040 - 4044018 - H 72 -4.8 -4.60648 | AAAAGATTAAAGAAA TGCCGATC TGATCAC GCTCGGCA GAAATCACGCTCTGG pepQ 4044112 - 4045443 + | proline dipeptidase TERM 5069 4045727 - 4045758 + G 77 -11.6 -3.23853 | opp_overlap 4045726 4045729, overlap 4045726 CGGCGTCGGGGAAAT TACCGCTGTGGTAG TGCG CTACTACGGCGGCA TATTGCTTGGCACCG yigZ 4045443 - 4046057 + | hypothetical protein TERM 5070 4047273 - 4047292 + G 75 -5 -4.84761 | CACTGCCGGAACGTA TCCTCGAA GCCG TTTGGGGA TTTTTCTCCGCCTAT trkH 4046096 - 4047547 + | potassium transporter TERM 5071 4047718 - 4047699 - g 70 -6.4 -4.22338 | opp_overlap 4047702, overlap 4047702 ACCACAATGGGAAAA CTATGACC GTGT GGTCATTG GTGCTTCTATTCGCT hemG 4047559 - 4048104 + | protoporphyrinogen oxidase TERM 5072 4050093 - 4050080 - T 75 -6.7 -4.41177 | overlap 4050084 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5073 4050319 - 4050295 - T 71 -8 -3.93061 | gap 1, opp_overlap 4050302 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5074 4050873 - 4050861 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5075 4053362 - 4053341 - T 74 -8.7 -3.91196 | CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTAGC TERM 5076 4053509 - 4053528 + T 100 -10 -4.7629 | opp_overlap 4053509 TCAAATTAAGCGAAA GGCTATCC GTCA GGATGGCC TTTTTGCGTTGGTGA mobB 4054121 - 4053594 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 5077 4053894 - 4053919 + g 100 -14.1 -3.85698 | opp_overlap 4053891, overlap 4053909 TTCCGTCATCAAGGC CCATCGTTGCT GGCT GGCAACGATGG TTTGTACCGCGCCAG TERM 5078 4054098 - 4054108 + g 71 -3.2 -4.7373 | GGCAAAGGCGAGTAA CGGT ATC ATCG TTTTTCCTGCCATCG mobA 4054687 - 4054103 - | molybdopterin-guanine dinucleotide biosynthesis protein A yihD 4054757 - 4055026 + | hypothetical protein TERM 5079 4056060 - 4056048 - g 72 -6.3 -4.31043 | ATAGAACAGGCAAAA GTTCT ACA AGAAC CCCCTTTGCAATTAA yihE 4055103 - 4056089 + | serine/threonine protein kinase dsbA 4056106 - 4056732 + | periplasmic protein disulfide isomerase I TERM 5080 4056772 - 4056753 - f 100 -13.6 -4.17516 | opp_overlap 4056753 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 5081 4056753 - 4056772 + F 100 -13.6 -6.01369 | opp_overlap 4056753 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 5082 4057070 - 4057060 - g 76 -4 -4.91712 | opp_overlap 4057060 GTTAAGTTATAAAAA CTTT GAC AAAG GCTTTTTTAATTCCC TERM 5083 4057313 - 4057298 - g 71 -3.2 -4.85782 | GCCGCGAAAAATAAA TCGCCC GTGG AAGCGA CATTGCGATTCGCGT yihF 4056845 - 4058317 + | hypothetical protein TERM 5084 4058356 - 4058320 - T 83 -8.9 -4.25104 | gap 1, opp_overlap 4058320 4058321 4058351, overlap 4058322 4058323 TTTTGTTCATTAAAA TACTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA-A CTTACTTATTCTGAC TERM 5085 4058355 - 4058322 - T 100 -14 -3.73042 | opp_overlap 4058321 4058320 4058351, overlap 4058320 4058323 TTGTTCATTAAAATA CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA ACTTACTTATTCTGA TERM 5086 4058354 - 4058323 - T 93 -15.3 -2.83504 | opp_overlap 4058321 4058320 4058351, overlap 4058322 4058320 TGTTCATTAAAATAC TCACTCGCCTCTG CTCATT CAGAGGCGAGTAA AACTTACTTATTCTG yihG 4059290 - 4058358 - | putative endonuclease TERM 5087 4058864 - 4058827 - G 70 -6.3 -4.22554 | gap 1 TGACGTAATAAATAA GCGCGGGA-ATAACGCTT CAT AAACGGCATATCCAGCGC CCAGCACGCCAGGCC TERM 5088 4059133 - 4059118 - G 77 -3.2 -5.10601 | overlap 4059119 ATAAAATCACAAAAA CGCGAA ACCT TTCGCC AAATGACTGGCACAG TERM 5089 4059220 - 4059200 - G 100 -6.9 -5.4833 | overlap 4059203 GGACGGAACAAAAAA TAGTGACCA AAA TGGTCAATA CGATACTCAGCAAAA TERM 5090 4059319 - 4059309 - H 74 -8.2 -4.00756 | CAGTGCACTAAAGAA GCGC AAG GCGC AGATTTTAGCAGAAA TERM 5091 4059484 - 4059461 - H 78 -6.1 -4.56642 | overlap 4059463 AAAAACAAAGACAAA CATCATGCT GTAAAA AGCATGATA ATAAATTAAAAGCGA TERM 5092 4060048 - 4060035 - g 70 -3.7 -4.66833 | overlap 4060036 CGCGAAGCCGAAAAA GCCGG GCGT CCGGT GCTGATTAGCACTGG TERM 5093 4060282 - 4060252 - g 76 -3.8 -5.00616 | GCGTCGGTGAAAAAA CCGCGCAGGCATTG CTG CAAGGTCTTGGCGG GCTGGATACGCTGTA TERM 5094 4060580 - 4060564 - g 70 -3.5 -4.64657 | opp_overlap 4060578, overlap 4060566 4060567 CCAAAGGGGCAAAAA CAGCCGC GAA GCCGCAG GAAACCAGTGTTGCA TERM 5095 4061469 - 4061458 - g 81 -7.2 -4.64334 | AACCGCTGAAGAAAA CGCC GGGT GGCG CGCCGTCAACGTCGG polA 4059654 - 4062440 + | DNA polymerase I TERM 5096 4062664 - 4062689 + T 100 -19.1 -5.4505 | opp_overlap 4062657 GCTGAATATTTTAGC CGCCCCAGTCA GTAA TGACTGGGGCG TTTTTTATTGGGCGA yihA 4063454 - 4062822 - | GTPase EngB TERM 5097 4063927 - 4063972 + H 100 -19.3 -3.69341 | opp_overlap 4063939, overlap 4063939 CGTTAAGGGTTATGA GTCAGGAAAAAAGGCGACAGA GTAA TCTGTCGCCTTTTTTCTTTGC TTGCTTTCTGTTAGA TERM 5098 4063939 - 4063960 + H 100 -14.5 -5.72053 | opp_overlap 4063939, overlap 4063927 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG TERM 5099 4063960 - 4063939 - H 100 -14.5 -5.1675 | opp_overlap 4063939 4063927 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG yihI 4064036 - 4064545 + | hypothetical protein TERM 5100 4064668 - 4064627 - f 72 -10.2 -2.91144 | overlap 4064624 4064629 4064650 4064652 TTATTCGTTAAACTA CAG-CGGTTGTCGCGGCGAC AAAA GTGGCTGCG-CAACCGGCTG ATGACCCGAAACGGG TERM 5101 4064707 - 4064650 - f 100 -14.2 -4.36914 | gap 3, overlap 4064629 4064627 4064624 4064652 GTCGCGGCGACAAAA GTGGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCCGC CAGAGACGCCATCGG TERM 5102 4064705 - 4064652 - f 90 -15.4 -2.52946 | gap 3, overlap 4064629 4064627 4064624 4064650 CGCGGCGACAAAAGT GGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCC GCCAGAGACGCCATC hemN 4064734 - 4066107 + | coproporphyrinogen III oxidase TERM 5103 4066152 - 4066116 - T 74 -10.3 -3.24735 | gap 1, opp_overlap 4066112, overlap 4066111 4066109 GATTTAAAGAGTGAA TGGCGC-TTCGTTTAC AAAGTA GAAAACGAAAGCGCCA TCAATGTGCTGAGAA TERM 5104 4066287 - 4066232 - T 70 -9 -3.30124 | gap 1, opp_overlap 4066232 4066233 4066270, overlap 4066233 TTGTAGGCCGGATAA GGCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGACGCTGGTCGCG TCTTATCAGGCCTAC TERM 5105 4066232 - 4066287 + T 77 -11.2 -3.21924 | gap 1, opp_overlap 4066232 4066233, overlap 4066233 4066270 TTGTAGGCCGGATAA GGCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGACGCTGGTCGCG TCTTATCAGGCCTAC TERM 5106 4066233 - 4066286 + T 86 -14.7 -2.5294 | gap 1, opp_overlap 4066232 4066233, overlap 4066232 4066270 TGTAGGCCGGATAAG GCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGACGCTGGTCGC GTCTTATCAGGCCTA TERM 5107 4066286 - 4066233 - T 78 -12.5 -2.57931 | gap 1, opp_overlap 4066233 4066232 4066270, overlap 4066232 TGTAGGCCGGATAAG GCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGACGCTGGTCGC GTCTTATCAGGCCTA TERM 5108 4066270 - 4066289 + T 73 -10 -3.30124 | opp_overlap 4066233 4066232, overlap 4066233 4066232 CTGAGCATGATGCCT GATGCGAC GCTG GTCGCGTC TTATCAGGCCTACGA glnG 4067967 - 4066558 - | nitrogen regulation protein NR(I) glnL 4069028 - 4067979 - | nitrogen regulation protein NR(II) TERM 5109 4068588 - 4068600 + g 75 -4.7 -4.83269 | opp_overlap 4068589, overlap 4068589 4068599 CGCCGCGCCACGTAA ACCGC CAA GCGGA TTTTTAATCTCATGT TERM 5110 4069140 - 4069123 - R 90 -7 -5.28176 | TTGACGGAGAAAAAA GCCCAT GCAGAG ATGGGC TGAAAGTTTCCACGG TERM 5111 4069184 - 4069164 - R 80 -9.6 -3.91911 | overlap 4069165 TCCACGGCAACTAAA TCCCGGCG TTGTG CGCCGGGT AGTACAACTTCAACT TERM 5112 4069183 - 4069165 - R 82 -13.1 -2.94825 | overlap 4069164 CCACGGCAACTAAAT CCCGGCG TTGTG CGCCGGG TAGTACAACTTCAAC glnA 4070610 - 4069201 - | glutamine synthetase TERM 5113 4069823 - 4069833 + g 70 -6.8 -4.13945 | CCGGAGCCGTTATCA CCGA ACA TCGG TTTTGGCATAAAGGT TERM 5114 4070830 - 4070816 - H 75 -10 -3.481 | opp_overlap 4070791 4070778 4070779, overlap 4070791 4070810 CAATGGAAACATTAA GCACCA TAT TGGTGC AATGACCTTTGGATA yihK 4070983 - 4072806 + | GTP-binding protein TERM 5115 4072847 - 4072830 - f 100 -11.3 -5.28176 | opp_overlap 4072830 TTTAGTCATAAAAAA CCTGCCA GCGA TGGCAGG TTTTTTTTTACCTGT TERM 5116 4072830 - 4072847 + F 100 -11.3 -6.13 | opp_overlap 4072830 TTTAGTCATAAAAAA CCTGCCA GCGA TGGCAGG TTTTTTTTTACCTGT TERM 5117 4073464 - 4073480 + G 72 -4.3 -4.63486 | opp_overlap 4073464 GAAACATATATTAAT CCTGAAG TTG CTCCGGG TTTTATTGAACAACT TERM 5118 4073570 - 4073560 - g 93 -4 -5.52986 | ACGGTAGTAAAAAAA TTGA TTT TCAA ACCCGTCAGAATGCC yihL 4073023 - 4073733 + | putative transcriptional regulator yihM 4073741 - 4074721 + | hypothetical protein TERM 5119 4074768 - 4074752 - f 78 -6.6 -4.68384 | ACGCAGTTAATAAAA CCATTC CATAT GAATGG TCGGTATCTTATTGC TERM 5120 4075359 - 4075369 + G 75 -6.8 -4.35474 | TTCCCTTATTGTGAT TGCC GTA GGCA TTATTATTTTCTTTG yihN 4074823 - 4075881 + | putative resistance protein insA 4075910 - 4076185 + | IS1 ORF1 insB 4076212 - 4076607 + | IS1 ORF2 SF3947 4076987 - 4076601 - | hypothetical protein yihO 4078422 - 4077019 - | putative permease TERM 5121 4078355 - 4078373 + g 90 -7.4 -5.00884 | opp_overlap 4078353 AAATTCGAACCGACG TCGCCCAT ACC ATAGGCGA TTTTTTCCCGCAGAT TERM 5122 4078435 - 4078454 + r 74 -5.6 -4.57882 | opp_overlap 4078438, overlap 4078436 4078438 4078443 CATAATCACTCCTTA TAACGCCC CGCA GGGCGTCG TTTATTATTATTACG TERM 5123 4078451 - 4078438 - R 73 -9.5 -3.30619 | opp_overlap 4078436 4078435 4078438 4078443 AATCACTCCTTATAA CGCCC CGCA GGGCG TCGTTTATTATTATT TERM 5124 4078438 - 4078451 + r 71 -9.5 -3.21565 | opp_overlap 4078438, overlap 4078436 4078435 4078443 AATCACTCCTTATAA CGCCC CGCA GGGCG TCGTTTATTATTATT SF3949 4079872 - 4078619 - | putative permease TERM 5125 4078807 - 4078785 - G 74 -9.8 -3.53444 | overlap 4078786 CGACGGTGTCGGAAA CCAGCGCCCA GTT CAGGCGCTGA GCCGAAGAACGCCAG TERM 5126 4078806 - 4078786 - G 70 -11.1 -2.71924 | overlap 4078785 GACGGTGTCGGAAAC CAGCGCCCA GTT CAGGCGCTG AGCCGAAGAACGCCA TERM 5127 4079336 - 4079390 + g 93 -8.4 -4.81083 | gap 1, opp_overlap 4079332, overlap 4079337 CGTGCACAGCAGCAG GCCCAGCGTA-GCGCCGCCCTGACG CCATGC CGCCAGTGAGGCGCGTTCGTTGGGG TTTTTGGTGATTGCC TERM 5128 4079337 - 4079389 + g 82 -11.9 -3.47927 | gap 1, opp_overlap 4079332, overlap 4079336 GTGCACAGCAGCAGG CCCAGCGTA-GCGCCGCCCTGACG CCATGC CGCCAGTGAGGCGCGTTCGTTGGG GTTTTTGGTGATTGC yihQ 4081921 - 4079885 - | alpha-glucosidase yihR 4083022 - 4082120 - | putative aldose-1-epimerase TERM 5129 4083071 - 4083041 - R 79 -11.3 -3.35992 | gap 1, opp_overlap 4083050, overlap 4083042 AGGCACCTTAATTAA CGACATACAGCCTC CCGT GAGGCTG-ATGTCA AACCCAAAAACTGCA TERM 5130 4083070 - 4083042 - R 78 -12.6 -2.61274 | gap 1, opp_overlap 4083050, overlap 4083041 GGCACCTTAATTAAC GACATACAGCCTC CCGT GAGGCTG-ATGTC AAACCCAAAAACTGC TERM 5131 4083121 - 4083147 + r 95 -12.3 -4.15453 | CTTTGGGGAGAGGGT TAGGGTGAGGG GAAAA CCCGCACCCTA TTTTCAGATCAGTTA yihS 4084401 - 4083160 - | hypothetical protein yihT 4085296 - 4084418 - | putative aldolase yihU 4086216 - 4085320 - | putative dehydrogenase TERM 5132 4085663 - 4085649 - G 75 -7 -4.36914 | overlap 4085651 GGGCTTCGCACAAAA CGGCGG CTT CTGCCG AAAGCGCATTGAGCG TERM 5133 4086853 - 4086819 - g 71 -2.6 -5.0133 | opp_overlap 4086832 GACGGCGCTAAAAAA GCCTTCACCCTGGCCC GTC AGGCGGGTGTGATGAC CGTTCTGGACGGGGA TERM 5134 4087245 - 4087258 + G 82 -2.4 -5.35222 | GGGATCCCTGACTGT GATC AAACCC GATC TTTTTTGTCACTTTT yihV 4086384 - 4087280 + | putative kinase yihW 4087314 - 4088099 + | putative DEOR-type transcriptional regulator yihX 4088198 - 4088797 + | phosphatase rbn 4088791 - 4089663 + | ribonuclease BN yihZ 4089660 - 4090097 + | D-tyrosyl-tRNA deacylase yiiD 4090094 - 4091083 + | putative acetyltransferase TERM 5135 4091090 - 4091113 + T 73 -11 -2.61452 | overlap 4091089 4091092 GAAGAGTAGCTTATG GAGAGGGGCG GTGC TGCCTCTCTC ATTCATTCCGGTCAT insB 4092020 - 4091625 - | IS1 ORF2 insA 4092322 - 4092047 - | IS1 ORF1 SF3963 4092877 - 4094022 + | hypothetical protein SF3964 4094416 - 4094045 - | hypothetical protein TERM 5136 4094154 - 4094191 + g 75 -6.8 -4.34402 | opp_overlap 4094154 4094165 TACCAGTATTCAGAA CTCCAGTGAAAGCGGC ATAGTG GCCGCCTGCTCAGGAG TTTTGCTATGACCCG TERM 5137 4094367 - 4094394 + g 70 -10.6 -2.79133 | opp_overlap 4094367, overlap 4094369 CGATGAGCAAGTAAA GACCGGTTGGTG GCAG TACTGACCGGTC TGTGATGAAAGATTA yiiE 4094674 - 4094919 + | hypothetical protein yiiF 4095137 - 4095379 + | hypothetical protein TERM 5138 4095401 - 4095390 - T 75 -3 -5.09426 | overlap 4095393 GGTAATGGGAAAAAA TGAT GTCA ATCA GATTGCTGACAACGT TERM 5139 4095421 - 4095450 + T 77 -10.7 -3.30124 | overlap 4095411 GCTGACAACGTGCGC GTTGTTCATGCCG GATG CGGCGTGAACGCC TTATCCGGCCTACAA fdhE 4096638 - 4095709 - | formate dehydrogenase accessory protein FdhE TERM 5140 4096567 - 4096586 + g 70 -10.7 -2.71325 | opp_overlap 4096567, overlap 4096564 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG TERM 5141 4096586 - 4096567 - G 86 -10.7 -3.97307 | opp_overlap 4096567 4096564 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4097270 - 4096635 - | formate dehydrogenase-O subunit gamma fdoH 4098169 - 4097267 - | formate dehydrogenase-O, iron-sulfur subunit TERM 5142 4097578 - 4097589 + g 70 -5.8 -4.28018 | overlap 4097575 GCTCAGCAACGCGCT CGCT CGCC AGCG TTTTCATCGACTCTT TERM 5143 4097959 - 4097984 + g 85 -11.3 -3.61715 | gap 1, opp_overlap 4097958 4097959 4097961 ATTTGGCGCTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA TERM 5144 4097984 - 4097959 - G 73 -11.3 -2.71791 | gap 1, opp_overlap 4097959, overlap 4097958 4097961 ATTTGGCGCTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA fdoG 4101232 - 4098182 - | formate dehydrogenase-O, major subunit TERM 5145 4100776 - 4100786 + g 77 -8.2 -4.10657 | AGCGGTTAACAGTCA CGCC TTC GGCG TTTTGCGCAATGTAG fdhD 4101426 - 4102259 + | formate dehydrogenase accessory protein TERM 5146 4102300 - 4102266 - T 100 -11.6 -4.50193 | opp_overlap 4102266 4102269 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 5147 4102266 - 4102300 + T 93 -13.8 -3.5782 | opp_overlap 4102266, overlap 4102269 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 5148 4102269 - 4102297 + T 87 -11.1 -3.91541 | opp_overlap 4102266, overlap 4102266 AATTAATTAAAATAA GTCCTGCGATATA TAT TAAATTGCAGGAC TTATTCATTTCGTGA insB 4102726 - 4102331 - | IS1 ORF2 insA 4103028 - 4102753 - | IS1 ORF1 TERM 5149 4103625 - 4103603 - R 74 -10.6 -3.14125 | overlap 4103601 TTGAGATAGTCAATA TCACGCAGGA TGG TCCTGCCTGA AACGCCAGTCTGTTG frvX 4104782 - 4103712 - | putative fructose-specific phosphotransferase system protein FrvX frvB 4106223 - 4104772 - | putative PTS transporter components IIBC TERM 5150 4105849 - 4105801 - G 78 -9.4 -3.96327 | gap 1, opp_overlap 4105801 4105800, overlap 4105787 4105784 ACCGCCGATGACAAA CGGCAGCGCCGCAGAGACGCCCG CCAT CAGGTGGCTCATCA-CGCTGCCG CTTTGCACTTCCTGT frvA 4106680 - 4106234 - | putative fructose-like phosphotransferase system subunit EIIA TERM 5151 4106843 - 4106859 + r 70 -2.3 -5.05228 | AACCACATGAATCAT TAATGGG TTA TTCATTA TTTTTGTGATTTACT TERM 5152 4106975 - 4106946 - R 90 -10.7 -4.37198 | overlap 4106948 4106949 AATCGAAATTTAAAA TATTGTGCCGGAG GCAT CTCCGGCACATTG GGCAATTACGGCAGG TERM 5153 4106973 - 4106948 - R 95 -13.3 -3.78026 | overlap 4106946 4106949 TCGAAATTTAAAATA TTGTGCCGGAG GCAT CTCCGGCACAT TGGGCAATTACGGCA TERM 5154 4106972 - 4106949 - R 100 -16.8 -2.86093 | overlap 4106948 4106946 CGAAATTTAAAATAT TGTGCCGGAG GCAT CTCCGGCACA TTGGGCAATTACGGC yiiL 4107295 - 4106981 - | hypothetical protein rhaD 4107946 - 4107305 - | rhamnulose-1-phosphate aldolase rhaA 4109630 - 4108371 - | L-rhamnose isomerase rhaB 4111096 - 4109627 - | rhamnulokinase rhaS 4111384 - 4112220 + | transcriptional activator RhaS rhaR 4112204 - 4113142 + | transcriptional activator RhaR SF3984 4114173 - 4113340 - | glp regulon protein TERM 5155 4114829 - 4114815 - g 75 -5.6 -4.6902 | opp_overlap 4114815 GCAGAATTTGAAAAA GCGGCA GCT TCCCGC TTTGGTTCCGGCTGG sodA 4114458 - 4115078 + | superoxide dismutase TERM 5156 4115158 - 4115132 - f 78 -5 -5.06451 | opp_overlap 4115136, overlap 4115136 TATCAGCTTAAAAAA TGAACCATCGCC AAC GGCGGTGGTTTT TTTGTGATCAATTCC TERM 5157 4115154 - 4115136 - f 84 -10.2 -3.93769 | opp_overlap 4115136, overlap 4115132 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5158 4115136 - 4115154 + F 100 -12.4 -5.67063 | opp_overlap 4115136 4115132 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5159 4115215 - 4115201 - f 71 -3.6 -4.83169 | ATGGTCCTATAAAAA TAAAAC AGC GTTTCA ATTGATGTGATTTTG TERM 5160 4115222 - 4115235 + F 76 -5.3 -4.79174 | AGCGTTTCAATTGAT GTGAT TTTG ATCAC TTTTATTGATTAAAT TERM 5161 4115377 - 4115366 - g 72 -5.8 -4.42386 | opp_overlap 4115370 4115372 GCTCGATTGAGAAAA TCCC GGGG GGGA TGATGCTCGTCCCGC kdgT 4115338 - 4116321 + | 2-keto-3-deoxygluconate permease SF3987 4117256 - 4116351 - | insertion element IS2 transposase InsD SF3988 4117579 - 4117214 - | insertion sequence 2 OrfA protein TERM 5162 4117681 - 4117704 + H 95 -13.2 -3.94853 | GTCTAATCCCCACAG CCGGATGAAC TAAC GTTCGTCCGG TTTGCTATTGAGTTC TERM 5163 4117754 - 4117744 - H 71 -6.8 -4.11692 | TACTTACCGCGAAAA CAGC ACG GCTG ACATAAAATAAATAT yiiM 4117806 - 4118480 + | hypothetical protein TERM 5164 4118518 - 4118504 - T 73 -10 -3.30124 | opp_overlap 4118507, overlap 4118507 GTGTAGGCCTGATAA GACGCT ATC AGCGTC GCATCAGGCATCCTG TERM 5165 4118596 - 4118578 - T 77 -8.8 -3.86015 | opp_overlap 4118579, overlap 4118579 TATCCTGCCTACAAA TGCGGAGT TTA ACTCCGCT TATACAGCGGCAACC TERM 5166 4118579 - 4118595 + T 81 -12.3 -3.28712 | opp_overlap 4118579 4118578 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC TERM 5167 4118595 - 4118579 - T 79 -12.3 -2.91395 | opp_overlap 4118579, overlap 4118578 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC cpxA 4119959 - 4118586 - | two-component sensor protein TERM 5168 4119243 - 4119233 - G 70 -6.8 -4.05389 | overlap 4119238 GAGAGATATCAGAAA GCAG ACG CTGC TGAGAGGTCATCATG cpxR 4120654 - 4119956 - | DNA-binding transcriptional regulator CpxR cpxP 4120804 - 4121304 + | periplasmic repressor CpxP TERM 5169 4121346 - 4121362 + F 100 -12.3 -5.9873 | ACCATCCCTGTCTTC CCCCACA TGA TGTGGGG TTTTTTTTATCCTCA TERM 5170 4121976 - 4121990 + G 72 -10 -3.30106 | overlap 4121975 4121973 4121983 GTCTTGGTACGGCTG GCATCG CGC CGATGC TCTGTTTGCATTGGG fieF 4121452 - 4122354 + | ferrous iron efflux protein F TERM 5171 4122593 - 4122563 - g 76 -11.1 -3.28924 | opp_overlap 4122588, overlap 4122588 TAGGTGTGTTGACAA GCGGCGGTGATGC GCCAG GCATGAACGCCGC AATTCGCGGGGTTGT TERM 5172 4122823 - 4122811 - g 77 -3.3 -5.15117 | GAAAACCTGAAAAAA CGTGG TAT CGACG CGCTGGTGGTTATCG TERM 5173 4123191 - 4123180 - g 93 -5.8 -5.22039 | overlap 4123182 4123183 GCGAAAGGTAAAAAA CACG CGAT CGTG GCGATTACCGAACAT pfkA 4122553 - 4123497 + | 6-phosphofructokinase TERM 5174 4123579 - 4123553 - f 78 -5 -4.96646 | overlap 4123554 TGACAGAAGCAAAAA TGCCTGATGCGC TTC GCTTATCAGGCC TACATGAATTCTGCA TERM 5175 4123683 - 4123699 + F 93 -9.4 -4.7497 | opp_overlap 4123683 4123680 TTGTCAGCAATATGA GGCGGA TTTCT TCCGCC TTTTTAATCCCTCAA TERM 5176 4124589 - 4124573 - g 84 -3.6 -5.24129 | overlap 4124575 4124584 GTGGTCGAGAAAAAA GGCACC AAAGA GGTGGC GGAAGCCTACCTGAA sbp 4123817 - 4124806 + | sulfate transporter subunit TERM 5177 4124829 - 4124851 + F 93 -6.9 -5.72622 | opp_overlap 4124829 AGGATAATTATCAAA CCCGGTGGT TTCTC GCGACCGGG TTTTTTATTTGTCAC cdh 4124913 - 4125668 + | CDP-diacylglycerol pyrophosphatase TERM 5178 4125713 - 4125691 - T 90 -13.5 -3.6187 | overlap 4125687 AGTTAAGGAAAGTAA GTGCCGGAT ATGAA ATCCGGCAC CTGTCAGACTTAAGC tpiA 4126490 - 4125723 - | triosephosphate isomerase yiiQ 4127197 - 4126598 - | hypothetical protein TERM 5179 4127190 - 4127177 - G 88 -2.3 -5.53436 | ACATAAGAGAAAAAA CAGCG TACA CCCTG GCTTCATTGACAGTA TERM 5180 4127766 - 4127813 + H 93 -16 -2.84566 | gap 1, overlap 4127763 CTCTTACTGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAATGACAATACCCGGAAAA TCCTTCTGAACTCTT yiiS 4127950 - 4128249 + | hypothetical protein TERM 5181 4128468 - 4128446 - g 76 -10.8 -3.41024 | opp_overlap 4128440, overlap 4128441 4128444 CCCTGCAACAGAAGA TATTCTTCAA TTG TTGAAGAATA AGTCGGATAACAAGC TERM 5182 4128541 - 4128525 - g 70 -3.6 -4.66537 | overlap 4128520 4128527 TGGCCGAAGACAAAA CTGCGT ATTGA ACGCGG AGAAATGCCGGAAAC yiiT 4128276 - 4128704 + | universal stress protein UspD fpr 4129455 - 4128709 - | ferredoxin-NADP reductase TERM 5183 4128735 - 4128775 + g 72 -10.3 -3.35224 | overlap 4128733 GCTCCGCTGTCATAT GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC TCTTTCAGCAACTGT TERM 5184 4129179 - 4129165 - G 70 -5.7 -4.33417 | TTCATCCAGAACAAA GAAGC CAGCT GCTTC GCTAACCACCTGCAC TERM 5185 4129531 - 4129510 - R 100 -13.1 -5.7946 | CTCCGAACAAAAAAA TTCCAGTCC CGAA GGACTGGAA GGCTCAATCGATCAA glpX 4130562 - 4129552 - | fructose 1,6-bisphosphatase II TERM 5186 4130455 - 4130473 + g 95 -9.5 -4.83169 | opp_overlap 4130442 4130441 ACGCATGGCGTTTAC CGCCGCG CCGTC CGCGGTG TTTTTATCGCCGCGT TERM 5187 4130627 - 4130650 + r 79 -10.2 -3.5944 | overlap 4130628 GGTGGGATTATTGAT GTGTGCGGGG TTGC CCCCGCACGG TTTCAGAGTCTGCGT TERM 5188 4130628 - 4130649 + r 83 -13.7 -2.75343 | overlap 4130627 GTGGGATTATTGATG TGTGCGGGG TTGC CCCCGCACG GTTTCAGAGTCTGCG glpK 4132150 - 4130792 - | glycerol kinase TERM 5189 4130820 - 4130833 + g 74 -3.1 -5.02074 | gap 1, overlap 4130811 TCTTCCCACGCCATC GCGCGT TTG AC-CGC TTTTTTCCAGCCTGC TERM 5190 4131274 - 4131284 + g 72 -6.8 -4.25074 | opp_overlap 4131274, overlap 4131282 CCGGAACCACATACA CACC ATT GGTG TTTTGCACTTTGGTG TERM 5191 4132161 - 4132185 + r 72 -8.7 -3.76492 | overlap 4132153 TCCATTGGGTCGTGT TCTACCCAA CCTGGTT TTGGGTAGA TTTGCTCAAATTCGC glpF 4133167 - 4132523 - | glycerol diffusion facilitator protein TERM 5192 4133719 - 4133703 - g 74 -2.9 -5.01858 | GAAAGAAAAAAACAA CTCACTG TCG CAGGAAG TTCAAAATGCCCAGC yiiU 4133593 - 4133838 + | hypothetical protein TERM 5193 4133900 - 4133915 + T 93 -10.4 -4.3953 | opp_overlap 4133900 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA TERM 5194 4133915 - 4133900 - T 100 -10.4 -5.31456 | opp_overlap 4133900 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA menG 4134408 - 4133923 - | ribonuclease activity regulator protein RraA menA 4135427 - 4134501 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5195 4135463 - 4135446 - R 100 -9.1 -5.06816 | opp_overlap 4135433, overlap 4135433 ACGCGCCAATAAAAA TGGGGCC TTTC AGCCCCA TCAAACAATGATGAA hslU 4136825 - 4135494 - | ATP-dependent protease ATP-binding subunit hslV 4137365 - 4136835 - | ATP-dependent protease peptidase subunit TERM 5196 4137420 - 4137401 - R 100 -13.6 -4.05991 | overlap 4137388 4137394 AATACAGAGTACAAA CCCCGTAC AAAA GTACGGGG CATAATGCAATTATA ftsN 4138417 - 4137458 - | essential cell division protein TERM 5197 4137874 - 4137885 + g 70 -5.8 -4.21974 | overlap 4137884 GCGACGTACGCGTCT GCTG CTGC CAGC TTTGTTCAGTCGTAC TERM 5198 4137970 - 4137986 + g 70 -10.1 -3.23853 | overlap 4137961 4137968 GTTGTAGCGTTTGCT GACGCTG TTC CGGCGTC TGTTCATTCCACGGA cytR 4139534 - 4138509 - | DNA-binding transcriptional regulator CytR priA 4141888 - 4139690 - | primosome assembly protein PriA TERM 5199 4140178 - 4140160 - G 74 -10.2 -3.53444 | overlap 4140171 CGACCTGGGTGTAAA GCTGAGCG AAA CGCTCTGC CGAGCGAAAATCGGC TERM 5200 4140745 - 4140773 + g 76 -7.9 -4.29153 | CCGGACGCGCATTCC CCGCCCGGCGCGT CAG GCGCAGCAGGCGG TATTTTTTCTGCTGG rpmE 4142091 - 4142303 + | 50S ribosomal protein L31 TERM 5201 4142323 - 4142336 + T 100 -9.5 -5.64274 | opp_overlap 4142323 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA TERM 5202 4142336 - 4142323 - T 100 -9.5 -5.02074 | opp_overlap 4142323 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA yiiX 4142972 - 4142364 - | putative peptidoglycan peptidase TERM 5203 4142943 - 4142964 + g 85 -7.3 -4.81083 | opp_overlap 4142939 4142940 4142942, overlap 4142942 4142948 AGGTACAGAAACCAG CAGGCTG AGGATCAG CAGCCTG TTTTTCATAGTTAAA metJ 4143473 - 4143156 - | transcriptional repressor protein MetJ TERM 5204 4144050 - 4144106 + G 76 -7.4 -4.24413 | gap 2, opp_overlap 4144089, overlap 4144053 4144054 4144084 GCGCCGCACGACTGC TACGGCGGTAGCTATCGCCTGTTCGACA GTC TGGCGAA-ACGCGGTTGCTATCGC-GTG TTGTTTGTTGATCAA TERM 5205 4144054 - 4144103 + G 73 -11.5 -2.81784 | gap 1, opp_overlap 4144089, overlap 4144053 4144050 4144084 CGCACGACTGCTACG GCGGTAGCTATCGCCTGTTCGACA GTC TGGCGAA-ACGCGGTTGCTATCGC GTGTTGTTTGTTGAT TERM 5206 4144084 - 4144109 + G 70 -6.1 -4.24342 | opp_overlap 4144089, overlap 4144054 4144053 4144050 TGTTCGACAGTCTGG CGAAACGCGGT TGCT ATCGCGTGTTG TTTGTTGATCAAGGC metB 4143750 - 4144910 + | cystathionine gamma-synthase metL 4144913 - 4147345 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 5207 4147496 - 4147518 + F 100 -8.4 -5.42605 | AGTTTATATTTGCAG TCCGGTTTGC TTT GCATATCGGA TTTTCTTTTTCTTAC metF 4147694 - 4148584 + | 5,10-methylenetetrahydrofolate reductase TERM 5208 4148659 - 4148697 + F 71 -10.4 -2.60392 | overlap 4148656 4148661 4148670 GCTGCCTCGAAATGA GGGCGGGAAAATAAGGTT GTC AGCCTTGTTTTCTCCCTC ATTACTTGAAGGATA katG 4148913 - 4151093 + | catalase; hydroperoxidase HPI(I) TERM 5209 4151103 - 4151135 + F 100 -21.5 -4.41616 | CTGTAATCTGACCTT CTTCAGCGACTGTCT TTC AGGCAGTCGCTGAAG TTTCTTTACCGGCGT TERM 5210 4151583 - 4151594 + G 77 -7.2 -4.53398 | TTCGCGATTCTGATT GCCG CTTT CGGC TTATTTTTGGTGTTG SF4021 4151154 - 4152092 + | hypothetical protein TERM 5211 4152959 - 4153000 + T 75 -9.6 -3.65201 | gap 1, opp_overlap 4152971, overlap 4152964 4152971 AGCGCATCAGGCAAT TTTGCGTTCAAACTCCCGG ACAAG CCGGGAGTTTGGA-GTAGG TTATTCCCACTCTTG TERM 5212 4152964 - 4152996 + T 78 -12.8 -2.65808 | opp_overlap 4152971, overlap 4152959 4152971 ATCAGGCAATTTTGC GTTCAAACTCCCGG ACAAG CCGGGAGTTTGGAG TAGGTTATTCCCACT TERM 5213 4152971 - 4152989 + T 86 -11.7 -3.62418 | opp_overlap 4152971, overlap 4152964 4152959 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT TERM 5214 4152989 - 4152971 - T 86 -11.7 -3.53343 | opp_overlap 4152971 4152964 4152959 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT TERM 5215 4153042 - 4153024 - T 72 -10.3 -2.83522 | overlap 4153023 ACTCTTGCAGGAAAC GCTGACC GTACT GGTCAGC TACCAGCAGTGCGGC TERM 5216 4154290 - 4154278 - T 72 -9.1 -3.53091 | ACGCGGCGTTTTAAA GCTGG CTG CCAGC ACCATGCTTTCTGGC SF4024 4154775 - 4154470 - | putative transaldolase TERM 5217 4155724 - 4155737 + H 83 -4.5 -5.27335 | overlap 4155725 TTACGTAGTTGCTGT TTGGC TTCT GCCAG TTTTTCTTTCACCCA TERM 5218 4157132 - 4157143 + H 74 -7.2 -4.20354 | opp_overlap 4157132, overlap 4157133 TATCGGTGCCAATCA GCGC CAGA GCGC TTTTGGCGTTGCCTT TERM 5219 4157458 - 4157468 + H 70 -2.4 -4.93898 | TATCGCAAGTTATGA GGCG GAT CGCA TTTTTGTACTGATAT frwC 4157597 - 4158676 + | putative fructose-like permease EIIC subunit 2 frwB 4158691 - 4159011 + | putative fructose-like phosphotransferase EIIB subunit 2 TERM 5220 4159020 - 4159037 + F 74 -10.5 -3.27525 | CGCTTAAGTTCTTCT CCCGCTC GCAA GGGCGGG TTCGCTTTCCCACAG TERM 5221 4159449 - 4159425 - gf 81 -6.6 -4.59773 | gap 1, opp_overlap 4159402 CCGTACTGGGAAAAA CGTTCGATGAA AGAT TTCATC-AACG GGCAGATGACAGATG TERM 5222 4159793 - 4159808 + GF 77 -9 -3.8512 | opp_overlap 4159782 4159781 TAAGCCGCAGACGTT CTGGCA GGCG TGCCAG TTATTCTGGTACATG pflD 4159062 - 4161359 + | putative formate acetyltransferase 2 TERM 5223 4161580 - 4161594 + GF 72 -9.2 -3.55801 | opp_overlap 4161580, overlap 4161581 CGTGATGCGGATGAA TGCCCC TCC GGGGCG TTTGAACGGATTGGT TERM 5224 4161581 - 4161593 + GF 71 -10.5 -2.73159 | opp_overlap 4161580, overlap 4161580 GTGATGCGGATGAAT GCCCC TCC GGGGC GTTTGAACGGATTGG pflC 4161325 - 4162203 + | pyruvate formate lyase II activase frwD 4162205 - 4162546 + | putative fructose-like phosphotransferase EIIB subunit 3 yijO 4163384 - 4162533 - | putative ARAC-type regulatory protein TERM 5225 4163037 - 4163061 + g 74 -6.3 -4.52347 | opp_overlap 4163020, overlap 4163026 4163033 TATGCGTGGGCCGCG TCGGGCGACGT GTT GCTTCGCCAGA TTTTGATATTGTTTG TERM 5226 4163458 - 4163438 - R 91 -7.6 -5.1861 | gap 1, overlap 4163422 GGCATTATTAAAAAA GGCCAC-CT GAAA AGTGTGGCC TGAGGGGAGTTCGAT yijP 4165266 - 4163533 - | hypothetical protein TERM 5227 4165214 - 4165198 - G 75 -4.3 -4.84033 | opp_overlap 4165208, overlap 4165201 AGAGAAAAACCAAAA GTAGAGC AGT GCCCAAC CCAGGGCTTTCCAGC TERM 5228 4165431 - 4165410 - R 100 -13.7 -4.41206 | opp_overlap 4165410 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGAAGAGGAA TERM 5229 4165410 - 4165431 + r 82 -11.5 -3.53012 | opp_overlap 4165410 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGAAGAGGAA ppc 4168100 - 4165449 - | phosphoenolpyruvate carboxylase TERM 5230 4168353 - 4168384 + r 77 -11.6 -2.76696 | opp_overlap 4168362 4168364 4168374, overlap 4168352 ACACCAAAGGTGTAG GTCGGATAAGATGC GCAA GCATCGCATCCGAC ATTATTGCGGCACCG TERM 5231 4168411 - 4168449 + r 87 -9.5 -4.25104 | gap 1, opp_overlap 4168389 4168374, overlap 4168414 ACCGGAGTTTGGCAA CG-GTGCCGGATGCGGCG CGAG CGCCTTATCCGGCCTACG TTTTAATGCCAGCAA TERM 5232 4168414 - 4168445 + r 79 -12.2 -2.77781 | opp_overlap 4168389 4168374, overlap 4168411 GGAGTTTGGCAACGG TGCCGGATGCGGCG CGAG CGCCTTATCCGGCC TACGTTTTAATGCCA argE 4169603 - 4168452 - | acetylornithine deacetylase TERM 5233 4169681 - 4169663 - H 73 -2.4 -5.14163 | ATTTATGAATAAAAA TACACTAA CGT TGAGCGTA ATAAAACCCACCAGC argC 4169757 - 4170761 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5234 4171041 - 4171028 - g 71 -2.3 -4.90525 | GAACGGCAAATAAAA CCCTG TTGG CATGG GCGAAGAAACATCAG argB 4170772 - 4171545 + | acetylglutamate kinase TERM 5235 4172839 - 4172817 - g 72 -10.6 -3.03635 | opp_overlap 4172815, overlap 4172806 CAAACCGCTGGAAGA TCTGCCACTC AGT GAGTTGCAGA AATTCAGTCAGGTGA argH 4171606 - 4172979 + | argininosuccinate lyase TERM 5236 4173173 - 4173148 - f 72 -9.1 -3.61398 | opp_overlap 4173148 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 5237 4173148 - 4173173 + F 100 -9.8 -5.61596 | opp_overlap 4173148 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SF4038 4173163 - 4174509 + | IS4 orf TERM 5238 4174520 - 4174491 - f 89 -9.3 -4.59109 | overlap 4174493 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCATTCTGGTG TERM 5239 4174518 - 4174493 - f 100 -16.3 -3.90762 | overlap 4174491 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCATTCTGG TERM 5240 4174790 - 4174806 + F 88 -3.7 -5.65496 | TTTTTGAGGGTATTT TTTCTCC TCG GTAGAAA TTTTTGTTTTTAATG TERM 5241 4175449 - 4175439 - g 74 -8.2 -3.91798 | GAACCGGCAACCAAA GGCC TGT GGCC AGAAGAGCAGTTGTG TERM 5242 4175888 - 4175902 + G 76 -7.8 -4.1721 | ATCGCCTGTTTGTCA TGCGGC GGC GCTGCA TTTTGACCTATGGGT SF4039 4174917 - 4176131 + | putative sensor protein insA 4176619 - 4176894 + | IS1 ORF1 insB 4176921 - 4177316 + | IS1 ORF2 TERM 5243 4177344 - 4177356 + F 77 -9.1 -3.91897 | ACCCGGTCTGGGTAT TGGCG AAG CGCCA TTTATGCCTGCGGGA TERM 5244 4178098 - 4178116 + F 83 -6.1 -4.95957 | TCCATCGCCGGGATT CAAAACT TTGGC AGTTTTG TTTTTGCTTCCTTTG TERM 5245 4178326 - 4178308 - f 100 -11 -6.41881 | TAGAATAAAAAAAAA GCGGATCC TGG AGATCCGC AAAAGTTCACGTTGG oxyR 4178512 - 4179429 + | DNA-binding transcriptional regulator OxyR udhA 4180812 - 4179412 - | soluble pyridine nucleotide transhydrogenase TERM 5246 4180868 - 4180843 - H 89 -9.1 -4.60797 | TTCTTATACATAAAA GCAACAGAATG GTAA CATTCTATCGC GGGTAAGCCAATTGA TERM 5247 4181181 - 4181167 - g 100 -2.7 -6.01725 | opp_overlap 4181176 AACAAAAAGAAAAAA CCCGC CGTTC GCTGG TGGAAGCCGCATTTA TERM 5248 4181763 - 4181749 - g 73 -4.2 -4.79752 | GTGAACAAGAGAAAA CCGCAA TTA TTCCGG GAAATGTGAAGGACG yijC 4181079 - 4181783 + | DNA-binding transcriptional repressor FabR TERM 5249 4181978 - 4181991 + G 73 -3.7 -4.77567 | GTAGGCTTGCCGGGT CTGGC AGCT GCCTG TTTTATTCTCGGCGT yijD 4181783 - 4182142 + | hypothetical protein TERM 5250 4182148 - 4182179 + T 100 -15.2 -4.41494 | overlap 4182149 4182150 TGCTGAGTAATCGGT ATCATGCCGGATGC TGGC GCATCCGGCATGGG TTTTACTTCGCGGTC TERM 5251 4182149 - 4182178 + T 100 -18.7 -3.24414 | overlap 4182148 4182150 GCTGAGTAATCGGTA TCATGCCGGATGC TGGC GCATCCGGCATGG GTTTTACTTCGCGGT TERM 5252 4182150 - 4182177 + T 100 -20 -2.54166 | overlap 4182149 4182148 CTGAGTAATCGGTAT CATGCCGGATGC TGGC GCATCCGGCATG GGTTTTACTTCGCGG trmA 4183282 - 4182182 - | tRNA (uracil-5-)-methyltransferase TERM 5253 4182246 - 4182273 + g 74 -9.8 -3.45839 | opp_overlap 4182244 4182246 AACTGATCAAACAGA GCCAGACGTTCG ACCT TGTGCGTCTGGC TTAATGTTTCCAGAT TERM 5254 4184114 - 4184096 - gH 70 -9.6 -3.01712 | GCGGGGTGGTGAATA TCATCACG ACG CGCGATGA ACCCGGAACGGAAAT btuB 4183651 - 4185495 + | vitamin B12/cobalamin outer membrane transporter TERM 5255 4185503 - 4185538 + GF 95 -14 -3.41125 | gap 1, opp_overlap 4185500, overlap 4185505 CCTTCTGAACCACGT CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG TTGTCGGTCTATGAC TERM 5256 4186238 - 4186286 + GF 87 -10.4 -4.18094 | gap 1, opp_overlap 4186238 4186235, overlap 4186239 GAAGCTGAACAATTA TTGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCAG TTTTAGGCTGATTTG TERM 5257 4186239 - 4186285 + GF 78 -11.7 -3.10134 | gap 1, opp_overlap 4186238 4186235, overlap 4186238 AAGCTGAACAATTAT TGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCA GTTTTAGGCTGATTT murI 4185440 - 4186297 + | glutamate racemase TERM 5258 4188282 - 4188269 - f 75 -6.7 -4.41177 | overlap 4188273 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5259 4188508 - 4188484 - f 71 -8 -3.93061 | gap 1, opp_overlap 4188491 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5260 4189062 - 4189050 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5261 4191551 - 4191530 - f 74 -8.7 -3.91196 | CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTAGC TERM 5262 4191698 - 4191711 + F 71 -3.7 -4.84529 | opp_overlap 4191699, overlap 4191692 4191691 4191699 TCAAATTAAGCAGAA AGCCC AGTC GGGCC TTTTTGCGTTTCTAC TERM 5263 4191710 - 4191699 - f 71 -7.2 -4.11938 | opp_overlap 4191699 4191698 4191692 4191691 CAAATTAAGCAGAAA GCCC AGTC GGGC CTTTTTGCGTTTCTA murB 4191810 - 4192838 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 5264 4193193 - 4193211 + G 81 -9.6 -4.08064 | opp_overlap 4193202, overlap 4193179 4193203 GCCGTGGTCGCCGGG GGCGGAAA TGG TTTTCGCC TTTTGGCGCAAACTT TERM 5265 4193203 - 4193224 + G 74 -8.7 -3.90766 | opp_overlap 4193202, overlap 4193193 CCGGGGGCGGAAATG GTTTTCGCC TTTT GGCGCAAAC TTATATTTGTCGATG birA 4192835 - 4193800 + | biotin--protein ligase TERM 5266 4193822 - 4193805 - T 88 -8.4 -4.80417 | CAGAAAAATAAGAAA GGGGAG TATTCG CTCCCC TGCAAATTATTTGCG coaA 4194755 - 4193829 - | pantothenate kinase TERM 5267 4195381 - 4195369 - H 73 -7.7 -4.15222 | opp_overlap 4195365 ACCGGCTCGAATAAA GAGAG CTT CTCTC GATATTCAGTGCAGA TERM 5268 4195743 - 4195727 - g 70 -4.4 -4.4715 | gap 1, opp_overlap 4195727 TTTGAACGTACAAAA CCGCACG TTAA CGT-CGG TACTATCGGCCACGT tuf 4195697 - 4196881 + | elongation factor Tu TERM 5269 4196945 - 4196904 - f 88 -14.5 -3.0792 | opp_overlap 4196905 4196916, overlap 4196916 TAACATTTGACGCAA TGCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGCT TTCGTACCAGAACCT TERM 5270 4196905 - 4196944 + F 100 -13.6 -3.72576 | opp_overlap 4196904 4196916, overlap 4196916 AACATTTGACGCAAT GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC TTTCGTACCAGAACC TERM 5271 4196916 - 4196933 + F 95 -11.3 -4.60924 | opp_overlap 4196904 4196916, overlap 4196905 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5272 4196933 - 4196916 - f 91 -11.3 -4.2679 | opp_overlap 4196916 4196905, overlap 4196904 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5273 4197403 - 4197417 + G 73 -11.4 -2.65264 | CCACGTTGATTGTGG CTGCGG TTA CCGCAG TAATGTCACTGATCC secE 4197111 - 4197494 + | preprotein translocase subunit SecE nusG 4197496 - 4198041 + | transcription antitermination protein NusG TERM 5274 4198076 - 4198058 - f 75 -3 -5.1675 | CCAGCGATCAAAAAA GCGGCGAT TTA ATCGTTGC ACAAGGCGTGAGATT TERM 5275 4198076 - 4198114 + F 100 -13.3 -4.8543 | opp_overlap 4198081, overlap 4198081 4198112 GCGATTTAATCGTTG CACAAGGCGTGAGATTG GAATA CAATTTCGCGCCTTTTG TTTTTATGGGCCTTG TERM 5276 4198081 - 4198109 + F 100 -11.8 -5.35224 | opp_overlap 4198081, overlap 4198076 TTAATCGTTGCACAA GGCGTGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5277 4198112 - 4198141 + F 90 -7.3 -5.36441 | gap 1, overlap 4198076 4198115 ACAATTTCGCGCCTT TTGTTTTTATGGGC CTT GCCCGTA-AAACGA TTTTTTATATCACGG rplK 4198200 - 4198628 + | 50S ribosomal protein L11 TERM 5278 4199176 - 4199136 - g 74 -3.1 -4.98255 | opp_overlap 4199144 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4198657 - 4199337 + | 50S ribosomal protein L1 rplJ 4199750 - 4200247 + | 50S ribosomal protein L10 rplL 4200314 - 4200679 + | 50S ribosomal protein L7/L12 TERM 5279 4200719 - 4200744 + F 100 -17.7 -4.64766 | opp_overlap 4200712 4200710 4200709, overlap 4200690 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5280 4201815 - 4201794 - g 81 -6.5 -4.87665 | gap 1 GTGTACGTAGAAAAA GGC-CGCCGT ATC ACTGCGCGCC ACATTCGCCAGCTGG TERM 5281 4204041 - 4204025 - g 86 -6.5 -5.10033 | overlap 4204026 CGAAGAGAAACAAAA TCAGCTG GAA CAGCTGG CTGAGCAGTATGACG TERM 5282 4204040 - 4204026 - g 77 -10 -3.64393 | overlap 4204025 GAAGAGAAACAAAAT CAGCTG GAA CAGCTG GCTGAGCAGTATGAC rpoB 4200999 - 4205027 + | DNA-directed RNA polymerase subunit beta TERM 5283 4205046 - 4205075 + F 70 -9.2 -3.4252 | opp_overlap 4205064, overlap 4205047 TCGCTCAAACAGGTC ACTGCTGTCGGG GTAAAA CCCGGCAGCGGA TTGTGCTAACTCCGA TERM 5284 4205047 - 4205074 + F 78 -12.7 -2.65298 | opp_overlap 4205064, overlap 4205046 CGCTCAAACAGGTCA CTGCTGTCGGG GTAAAA CCCGGCAGCGG ATTGTGCTAACTCCG TERM 5285 4206444 - 4206460 + G 72 -7.9 -3.87373 | opp_overlap 4206433 4206443 4206440 CGAAGGTAAAGCTAT CCAGCTG CAC CCGCTGG TTTGTGCGGCATATA TERM 5286 4206939 - 4206955 + G 78 -7.9 -4.40561 | CTGCTACCGCATTCT CGGTCTG AAA CCGACCG TTATTTTTGCGGACC rpoC 4205104 - 4209327 + | DNA-directed RNA polymerase subunit beta' TERM 5287 4209367 - 4209354 - T 100 -9.5 -4.8384 | opp_overlap 4209354 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT TERM 5288 4209354 - 4209367 + T 100 -9.5 -5.65177 | opp_overlap 4209354 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT thiH 4210702 - 4209569 - | thiamine biosynthesis protein ThiH thiG 4211469 - 4210699 - | thiazole synthase TERM 5289 4211519 - 4211497 - R 72 -4.9 -4.70626 | overlap 4211488 CAATAACCTGAAAAA GCAGGAT CTGGTCGCC ATCCTGC ACGATATGTTGCGTC thiF 4212410 - 4211655 - | thiamine biosynthesis protein ThiF thiE 4213038 - 4212403 - | thiamine-phosphate pyrophosphorylase thiC 4214933 - 4213038 - | thiamine biosynthesis protein ThiC yjaE 4215643 - 4215167 - | anti-RNA polymerase sigma 70 factor TERM 5290 4215795 - 4215759 - g 75 -4.3 -4.78149 | opp_overlap 4215758, overlap 4215762 4215764 CGTATAATTGAAAAA TTAGATCACGGCTGGTG GGT CGTCAGCCATGAACAAA AATTATGGTTGCCGA nudC 4215738 - 4216511 + | NADH pyrophosphatase TERM 5291 4216669 - 4216684 + G 74 -6 -4.56358 | opp_overlap 4216666, overlap 4216670 AATATAAAGCCACGC GCGCCC AGGC GGGCGA TTTTATGTCGCTGTG TERM 5292 4216718 - 4216706 - g 74 -6.2 -4.56597 | GTCGCTGTGCAAAAA CGCC GAGCT GGCG TGCGAAGTGACTTTG hemE 4216551 - 4217615 + | uroporphyrinogen decarboxylase TERM 5293 4217616 - 4217635 + F 83 -6.4 -4.91429 | opp_overlap 4217618, overlap 4217618 CAGTATCACCGCTAA GAGCCTGA TCCA TCAGGCTA TTTTATTTGCCATTT TERM 5294 4217618 - 4217633 + F 79 -9 -4.06281 | opp_overlap 4217618, overlap 4217616 GTATCACCGCTAAGA GCCTGA TCCA TCAGGC TATTTTATTTGCCAT TERM 5295 4217859 - 4217847 - g 72 -7.7 -3.89822 | GATCGACTCGATAAA GATCC ACC GGATC TGATCGCCGGAGCCG TERM 5296 4218181 - 4218171 - g 71 -2.4 -5.00616 | opp_overlap 4218171 GGCGTGGCGAAAAAA CGGC TCT GCGG TAAATTCGAACCGCT nfi 4217772 - 4218443 + | endonuclease V yjaG 4218486 - 4219076 + | hypothetical protein hupA 4219263 - 4219535 + | transcriptional regulator HU subunit alpha TERM 5297 4219566 - 4219581 + G 100 -10.4 -4.84918 | opp_overlap 4219566 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC TERM 5298 4219581 - 4219566 - g 72 -10.4 -3.35639 | opp_overlap 4219566 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC yjaH 4219548 - 4220243 + | hypothetical protein zraP 4220670 - 4220245 - | zinc resistance protein TERM 5299 4220773 - 4220800 + H 84 -7.8 -4.81083 | gap 1, opp_overlap 4220773 ATAAACGAGTAAAAA TGACTCGCCTGCT GCG GGTAG-CGAGTCA TTTTTACTCATTGAA TERM 5300 4220800 - 4220773 - H 80 -6.2 -4.85267 | opp_overlap 4220773 ATAAACGAGTAAAAA TGACTCGCCTGC TGCG GGTAGCGAGTCA TTTTTACTCATTGAA TERM 5301 4221106 - 4221144 + G 77 -11.6 -3.14344 | TCCGGCTCGCGCGTC GGCATGGGGATGCGCATG CAT CATGCGCAGCAGCAGGCC TTACTGGAAGAAATG hydH 4220908 - 4222284 + | sensor protein ZraS TERM 5302 4223557 - 4223530 - g 90 -10.4 -4.36914 | opp_overlap 4223530 CGGCGCTGGAGAAAA CGGGCGGCAACA AAAC CGAAGCCGCCCG TCAGTTAGGGATCAC hydG 4222281 - 4223606 + | transcriptional regulatory protein ZraR purD 4224892 - 4223603 - | phosphoribosylamine--glycine ligase TERM 5303 4224179 - 4224215 + g 72 -8.6 -3.81259 | gap 1, overlap 4224181 AACTTCATCGGTTAC TACCGGCGCGG-GGGAG TAAG CGCCCATCCCGCCGGTG TTTGGTCCGTTATCT TERM 5304 4224181 - 4224213 + g 71 -9 -3.48506 | gap 1, overlap 4224179 CTTCATCGGTTACTA CCGGCGCGG-GGGAG TAAG CGCCCATCCCGCCGG TGTTTGGTCCGTTAT purH 4226493 - 4224904 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5305 4226565 - 4226524 - H 100 -20.5 -2.96216 | opp_overlap 4226559 4226561, overlap 4226526 4226561 TTTGACTATTACAGA GAGCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGCCC CTAACGGGGCATCCT TERM 5306 4226563 - 4226526 - H 100 -19.5 -3.03443 | opp_overlap 4226559 4226561, overlap 4226524 4226561 TGACTATTACAGAGA GCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGC CCCTAACGGGGCATC TERM 5307 4226610 - 4226628 + H 73 -2.4 -5.20783 | opp_overlap 4226608, overlap 4226614 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTCTTTCAAT TERM 5308 4226898 - 4226884 - H 86 -4.2 -5.47159 | opp_overlap 4226884, overlap 4226885 4226892 GTTGAAGAGAAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAATAG TERM 5309 4226897 - 4226885 - H 71 -7.7 -3.87211 | opp_overlap 4226884, overlap 4226884 4226892 TTGAAGAGAAAAAAT CCTGA AAT TCAGG GTTGACTCTGAAATA TERM 5310 4228720 - 4228707 - H 75 -6.7 -4.41177 | overlap 4228711 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5311 4228946 - 4228922 - H 71 -8 -3.93061 | gap 1, opp_overlap 4228929 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5312 4229500 - 4229488 - H 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5313 4231989 - 4231968 - H 74 -8.7 -3.91196 | CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTAGC TERM 5314 4232809 - 4232824 + H 100 -10.4 -5.63517 | CAGCACCTTACCTCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA TERM 5315 4234013 - 4234027 + H 71 -7 -4.15044 | overlap 4234014 GGTGCTTTTGCGATG GGCGGC ATG GCCGCG TTTATTCCGAGCAAA TERM 5316 4234014 - 4234026 + H 73 -10.5 -3.08812 | overlap 4234013 GTGCTTTTGCGATGG GCGGC ATG GCCGC GTTTATTCCGAGCAA aceA 4234663 - 4235967 + | isocitrate lyase TERM 5317 4236432 - 4236453 + T 77 -3.6 -5.09895 | GTTGCCGGATTACCC GCGCTTCG AGATTG CGGAGAGC TTTTTTAACTCCGTG TERM 5318 4236488 - 4236511 + T 81 -5.2 -5.20783 | overlap 4236489 GTCGGTTATTTGACC ACCGCTCG CTTACTCC CGAGCGGC TTTTTATCTTTAGCT TERM 5319 4236489 - 4236510 + T 72 -8.7 -3.70843 | overlap 4236488 TCGGTTATTTGACCA CCGCTCG CTTACTCC CGAGCGG CTTTTTATCTTTAGC TERM 5320 4237367 - 4237352 - T 78 -4.7 -5.07053 | AAGCAGCGGAAAAAA TCACC GATCTT GGTGA GCAGATTGTAATTCG TERM 5321 4237419 - 4237395 - T 70 -9.3 -3.31144 | opp_overlap 4237395 TCGCCATCTCTATAA TCGAGCGGC GGATGGT GCCGCTCAA TATCTGGCTGGAACA TERM 5322 4237545 - 4237565 + T 84 -5.3 -5.37345 | overlap 4237546 4237546 TTAAAAACTTCGGTG TCACCCGTC ACG GGCGTGTGG TTTTTTATGATTACG iclR 4241182 - 4240358 - | transcriptional repressor IclR TERM 5323 4241206 - 4241220 + H 81 -3.6 -5.30348 | CCTTTTTCTGTATCG TGGAAA TTA TTTTCA TTTTTATTGTTAGCT TERM 5324 4242535 - 4242519 - g 72 -6.5 -4.41237 | overlap 4242521 ATCAAAGAAGAGAAA TACAGCG AGG CGCTGGA TGTGGCGCGTCAGCA TERM 5325 4242533 - 4242521 - g 76 -9.1 -3.79177 | overlap 4242519 CAAAGAAGAGAAATA CAGCG AGG CGCTG GATGTGGCGCGTCAG metH 4241382 - 4245065 + | B12-dependent methionine synthase TERM 5326 4245094 - 4245124 + F 90 -10.4 -4.29106 | opp_overlap 4245098, overlap 4245096 4245098 CACTTTTCCTTACAA CAAACAGGGCGCTC AAT GAGTGCCCTGTCTC TTTATTAATATGAAA TERM 5327 4245096 - 4245122 + F 95 -13 -3.7456 | opp_overlap 4245098, overlap 4245094 4245098 CTTTTCCTTACAACA AACAGGGCGCTC AAT GAGTGCCCTGTC TCTTTATTAATATGA TERM 5328 4245120 - 4245098 - f 95 -13.4 -4.30719 | opp_overlap 4245096 4245094 4245098 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5329 4245098 - 4245120 + F 100 -15.6 -3.44527 | opp_overlap 4245098, overlap 4245096 4245094 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5330 4245361 - 4245379 + G 77 -10.2 -3.70417 | overlap 4245362 4245371 TTCGAACCGGCGTAA TGCGCGTC TTC GGCGCGCG TTTGCGTACTGTCCT TERM 5331 4245362 - 4245378 + G 73 -11.5 -2.81768 | overlap 4245361 4245371 TCGAACCGGCGTAAT GCGCGTC TTC GGCGCGC GTTTGCGTACTGTCC TERM 5332 4245443 - 4245416 - g 86 -4 -5.41143 | GAGCGTCGAAAAAAA GCCGCTCGCC TTTTGCGC GGGGATCGGC GTTACCGCACTGGTA TERM 5333 4246833 - 4246850 + G 70 -4.1 -4.68384 | TTACTGGGAGATATG CAGCG CCTGAACT CGCTG TTTTGTTCGGTGGCT yjbB 4245285 - 4246916 + | putative alpha helix protein TERM 5334 4247000 - 4246980 - T 79 -11.2 -3.45742 | opp_overlap 4246979, overlap 4246978 GCACTATGAACAAGA TGCCGGAT CATGC ATCCGGCA ATTCACTTAAAAACG pepE 4247696 - 4247007 - | peptidase E TERM 5335 4247606 - 4247592 - G 81 -9.2 -4.02534 | AGCGAAAGGGATAAA CACCGC TGA GCGGCG ACCCTGCAACTGTTC TERM 5336 4247944 - 4247969 + r 79 -3.2 -5.39755 | opp_overlap 4247944, overlap 4247946 4247949 GTACTTTGCCACCAA TTTGAGCGCC CCTTAA GGCGCTGATA TTTTTTATCCTTCTC sorE 4249307 - 4248078 - | putative L-sorbose-1-P-reductase sorM 4250147 - 4249359 - | putative sorbose-permease PTS system IID component sorA 4250898 - 4250158 - | putative sorbose-permease PTS system IIC component TERM 5337 4250352 - 4250333 - G 74 -2.8 -4.91852 | CCGAGGAAAAAGAAA GGCATCAA ATAT TTCACGCC CATCATACGTAGCAC sorB 4251515 - 4251021 - | putative sorbose-permease PTS system IIB component sorF 4251922 - 4251515 - | putative sorbose-permease PTS system IIA component TERM 5338 4251921 - 4251910 - G 79 -2.2 -5.24129 | CGTGGGCACAAAAAA TGGC GTTG ACCA TAAAGCCTCCTTAGC sorD 4252738 - 4251932 - | sorbitol-6-phosphate 2-dehydrogenase TERM 5339 4252183 - 4252195 + g 71 -9.1 -3.55815 | GCGCGATACCGACCA CACGG ATA CCGTG TTTACCCAGCTCTTT sorC 4253755 - 4252808 - | putative sor-operon regulator TERM 5340 4254930 - 4254910 - g 72 -4.5 -4.61527 | overlap 4254912 AAAACGGCGGAAAAA GGCGGTCGC CCG GCGTCCAAC GGTAAGCGTTTTACC yjbC 4254103 - 4254975 + | 23S rRNA pseudouridine synthase F SF4096 4256156 - 4255251 - | insertion element IS2 transposase InsD SF4097 4256479 - 4256114 - | insertion sequence 2 OrfA protein TERM 5341 4258076 - 4258089 + G 74 -2.3 -5.14563 | GGTAAGATCAAATCT CCGGT TATC GCTGG TTTTTTAATCAGCAA yjdH 4256894 - 4258525 + | sensory histidine kinase DcuS yjdG 4258522 - 4259241 + | DNA-binding transcriptional activator DcuR TERM 5342 4260716 - 4260705 - g 74 -2.2 -5.0538 | GTCTATCTCAAAAAA CGAA GTCT TCCG TTCCGGTATGATCGC dcuB 4259812 - 4261152 + | anaerobic C4-dicarboxylate transporter TERM 5343 4261160 - 4261191 + F 76 -8.7 -4.13767 | opp_overlap 4261155 TCTTATAAATGCACT TTGCGTGCCGC CCGTGACTAC GCGGCACGCCA TTTTCGAATAACAAA TERM 5344 4261875 - 4261859 - g 73 -3.7 -4.81249 | overlap 4261860 CGGCAAACTGAAAAA CTTCCTC GTC GAGAAAA TGCGTACCCTCGGTA TERM 5345 4261895 - 4261876 - g 75 -7.2 -4.36914 | gap 1 TCCTCGTCGAGAAAA TGC-GTACC CTC GGTACTGCA GCCTGCCCGCCGTAC fumB 4261230 - 4262876 + | fumarase B, fumarate hydratase class I yjdF 4262999 - 4263628 + | hypothetical protein TERM 5346 4263716 - 4263744 + T 75 -6.1 -4.45151 | opp_overlap 4263715 CATTACATTAAGACG TGGCCTGAT AAACATATCGC ATCAGGCCA TTTTCGTTAGCTATT melB 4265176 - 4263767 - | melibiose:sodium symporter melA 4266646 - 4265291 - | alpha-galactosidase TERM 5347 4265401 - 4265426 + g 76 -7.6 -4.18494 | gap 1 TATGCGGGTCCATCA TCGCGG-CGTG GTAAA CACGGTCGCGA TTTTCCGTAAGAATA TERM 5348 4266004 - 4265961 - G 80 -11.6 -3.28712 | opp_overlap 4265960 4265994, overlap 4265994 TGCCCTGCTTCATAA GCCGCCAGCAGTTCCGGGTA GAGA TTCACGTAACTGCCGTCGGC GGTTTTGCGCTCCAG TERM 5349 4265994 - 4266006 + g 70 -6.9 -4.13945 | opp_overlap 4265961 4265994, overlap 4265960 TAGAGATTCACGTAA CTGCC GTC GGCGG TTTTGCGCTCCAGCT TERM 5350 4266725 - 4266778 + H 78 -12.2 -2.54896 | gap 3, opp_overlap 4266735, overlap 4266769 CTTCCAGGTTGAGCA TTCCCATAAACTCAGA--TCCTGCGTG AAG CA-GCAGTAAATCTGAGTTTATGGGAA TAAATTACCTGAAAA TERM 5351 4267488 - 4267477 - g 74 -2.2 -5.03994 | gap 1, opp_overlap 4267484 4267486 GCGCACACACAAAAA CAGCG TCT CGC-G CCATGCGCAATTTTA TERM 5352 4267484 - 4267498 + G 75 -5.6 -4.66537 | opp_overlap 4267477, overlap 4267486 CACAAAAACAGCGTC TCGCGC CAT GCGCAA TTTTATGTTAGCCAG melR 4266929 - 4267837 + | DNA-binding transcriptional regulator MelR TERM 5353 4269157 - 4269167 + G 70 -6.8 -4.07687 | opp_overlap 4269157 ACCTGGCGATCACAA CGGT CCT ACCG TTTTCGCCACCCACT TERM 5354 4269493 - 4269482 - g 70 -5.8 -4.20367 | CCGTGGAACAAAGAA GTCG TCAC CGAC CCACAAACCGGCAAA TERM 5355 4269701 - 4269690 - g 72 -7.2 -4.20918 | opp_overlap 4269700 GTGAACTGGAAGAAA CCGG TGTT CCGG CGGCGCTGGTCACTG TERM 5356 4269988 - 4269970 - g 90 -7.4 -4.86731 | CTGGCTGAAAGAAAA CAACCCTG GCG CACGGTTG AACGAAGCCTATTCC adiA 4268036 - 4270303 + | biodegradative arginine decarboxylase TERM 5357 4270352 - 4270362 + F 79 -8.2 -4.2349 | overlap 4270348 AACATTACGCCGCCT GGCC TTA GGCC TTTTGAGTATGGCAA TERM 5358 4270421 - 4270439 + F 95 -3 -5.85178 | AATGTCATACTTTTT GCGCGG CCCCACC CCACGC TTTTTTTTGCCTGTT TERM 5359 4271298 - 4271308 + G 75 -5.4 -4.69487 | opp_overlap 4271296 4271298 CCTGCGGCTACAACA GTAC GTC GTAC TTTATTTCTGTCTTT adiY 4270628 - 4271389 + | putative ARAC-type regulatory protein TERM 5360 4271560 - 4271592 + G 80 -12 -3.33162 | overlap 4271563 CTCACAAAGTGGGCT TAATCCCCGTCACC CTGAT GGTGTCGGGGAATA TTATGGGGTCAGGTG TERM 5361 4271563 - 4271589 + G 84 -13.7 -2.53822 | overlap 4271560 ACAAAGTGGGCTTAA TCCCCGTCACC CTGAT GGTGTCGGGGA ATATTATGGGGTCAG yjdE 4271526 - 4272863 + | arginine:agmatin antiporter TERM 5362 4272886 - 4272919 + F 90 -9.7 -4.54727 | opp_overlap 4272890, overlap 4272890 TAATCCAGCAAACAT AAAAGCCAACCTTAA GAAC TTAAGGTTGGCTTAA TTTTGCTTTGCGAGC TERM 5363 4272890 - 4272915 + F 100 -14.9 -3.78998 | opp_overlap 4272890, overlap 4272886 CCAGCAAACATAAAA GCCAACCTTAA GAAC TTAAGGTTGGC TTAATTTTGCTTTGC TERM 5364 4272915 - 4272890 - f 100 -14.9 -4.82128 | opp_overlap 4272886 4272890 CCAGCAAACATAAAA GCCAACCTTAA GAAC TTAAGGTTGGC TTAATTTTGCTTTGC yjdB 4272937 - 4274610 + | putative cell division protein basR 4274607 - 4275275 + | DNA-binding transcriptional regulator BasR basS 4275276 - 4276376 + | sensor protein BasS/PmrB TERM 5365 4276401 - 4276382 - T 72 -5 -4.65722 | gap 1, overlap 4276384 CCAGATATAAAGAAA GC-TGCTGA CCA CCAGCACGC TGAACACGGTAGTTA TERM 5366 4276511 - 4276541 + T 78 -12.6 -2.66593 | overlap 4276507 CCTTAAGAGTTCAAT TGGCCTGATAAGAC AGC GTCACATCAGGCCA TCCGTTTCAGCTTAT proP 4278055 - 4276553 - | proline/glycine betaine transporter yjcZ 4279164 - 4278319 - | hypothetical protein yjdA 4281422 - 4279194 - | hypothetical protein TERM 5367 4280659 - 4280671 + g 77 -3.4 -5.03314 | GAGGCGCGTGCCAGC TGCT GGTTA AGCA TTTTTTGCAGATGCG TERM 5368 4281770 - 4281782 + H 100 -9.1 -5.08011 | AATTGCGGCCTTTTT CGGCA ATC TGCCG TTTTTTGGCGCTTTT phnA 4281825 - 4282160 + | hypothetical protein TERM 5369 4282242 - 4282188 - f 93 -14.9 -3.33261 | gap 1, opp_overlap 4282188 4282189 4282212 4282218 4282231, overlap 4282189 4282214 CGGTAAGCCGGATAA GGCGCTCGCGCCGCATCCGGCAA-CG ATGC CGACTGCCTGATGCGACGCTTGCGCG TCTTATCAGGCAGCC TERM 5370 4282188 - 4282242 + F 74 -10.5 -3.21276 | gap 1, opp_overlap 4282188 4282189 4282214, overlap 4282189 4282212 4282218 4282231 CGGTAAGCCGGATAA GGCGCTCGCGCCGCATCCGGCA-ACG ATGC CGACTGCCTGATGCGACGCTTGCGCG TCTTATCAGGCAGCC TERM 5371 4282241 - 4282189 - f 100 -18.4 -2.59742 | gap 1, opp_overlap 4282188 4282189 4282212 4282218 4282231, overlap 4282188 4282214 GGTAAGCCGGATAAG GCGCTCGCGCCGCATCCGGCAA-CG ATGC CGACTGCCTGATGCGACGCTTGCGC GTCTTATCAGGCAGC TERM 5372 4282189 - 4282241 + F 83 -14 -2.52623 | gap 1, opp_overlap 4282189 4282188 4282214, overlap 4282188 4282212 4282218 4282231 GGTAAGCCGGATAAG GCGCTCGCGCCGCATCCGGCA-ACG ATGC CGACTGCCTGATGCGACGCTTGCGC GTCTTATCAGGCAGC TERM 5373 4282212 - 4282264 + F 73 -10.6 -2.98088 | gap 1, opp_overlap 4282189 4282188 4282214, overlap 4282189 4282188 4282218 4282231 GCCGCATCCGGCAAC GATG-CCGACTGCCTGATGCGACGC TTGC GCGTCTTATCAGGCAGCCTCTCATC TGTATAAATTTCGAA TERM 5374 4282218 - 4282257 + F 100 -17.2 -2.90797 | opp_overlap 4282189 4282188 4282214, overlap 4282189 4282188 4282212 4282231 TCCGGCAACGATGCC GACTGCCTGATGCGACGC TTGC GCGTCTTATCAGGCAGCC TCTCATCTGTATAAA phnB 4282318 - 4282761 + | hypothetical protein TERM 5375 4283304 - 4283284 - g 74 -8.9 -3.96327 | ACCGGCGAGCAGAAA CAGCGCGCG TTA CAGGCGCTG ACCCGCGTTGGCATG phnC 4282894 - 4283682 + | phosphonate/organophosphate ester transporter subunit TERM 5376 4284349 - 4284335 - g 76 -7.8 -4.21936 | overlap 4284336 TCGACAAGCTGAAAA CCTCCG CGC CGGAGA AGCTTAAAGAGCTGA phnD 4283707 - 4284723 + | periplasmic binding protein component of phosphonate transporter insB 4285391 - 4284996 - | IS1 ORF2 insA 4285693 - 4285418 - | IS1 ORF1 TERM 5377 4286303 - 4286313 + r 76 -2.4 -5.38047 | TCTATCTATTATTAC CGCG ATA CGCC TTTTTTCTCTGGCTA TERM 5378 4286987 - 4286997 + r 74 -6.8 -4.2828 | GTTTCTATTAACCTG TCGG CCT CCGA TTTTCATACGTCACG TERM 5379 4287485 - 4287456 - R 83 -12.9 -3.19389 | CAATGGATGGAGCAA TTACCCGCGCG GGAGTTAA CGCGCGGGCAA TAAAACTACAGGCGG soxS 4287814 - 4287491 - | DNA-binding transcriptional regulator SoxS TERM 5380 4288113 - 4288084 - g 70 -5.7 -4.3534 | gap 1 TCGCAATTATCAAAA TCGCTCAGCGTATT GGC ATTCCGCTG-GCGA CCATTGGTGAAGCGT soxR 4287900 - 4288364 + | redox-sensing activator of soxS TERM 5381 4288544 - 4288520 - f 100 -14.4 -4.78848 | opp_overlap 4288520 TCCGCAAACACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 5382 4288520 - 4288544 + F 100 -14.4 -4.67651 | opp_overlap 4288520 TCCGCAAACACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 5383 4289242 - 4289226 - g 71 -9.4 -3.53811 | opp_overlap 4289235 GGTATGTTGGGTAAA GCAGGC TTCCC GCCTGC GGCAGTTTTCGTTGC yjcD 4289070 - 4290419 + | hypothetical protein TERM 5384 4290435 - 4290466 + F 100 -12.4 -4.37658 | opp_overlap 4290441, overlap 4290441 TCTTTCATCGGATTC TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA TTTTCTCCGCACATT TERM 5385 4290441 - 4290460 + F 100 -9.2 -5.54907 | opp_overlap 4290441, overlap 4290435 ATCGGATTCTGAAAA CGGGTGGC AATG GCTGCCCG TTTTTATTTTCTCCG TERM 5386 4290720 - 4290737 + G 74 -2.7 -4.94672 | TTTGGTTTGCATGTG GAGTTTG ATCC TGAACTC TTTTTAGTCTTGTTT yjcE 4290570 - 4292219 + | hypothetical protein TERM 5387 4292297 - 4292239 - T 93 -15.5 -2.76456 | gap 1, opp_overlap 4292260 4292286, overlap 4292260 AAAGCGACGTAACCA GGCCCGAGGTAATCTGAAAAAGGTGCAA TCTT TTGCACCTTTAACAGGTTAGCTCGGG-C GAACATTCATGATTC TERM 5388 4292277 - 4292260 - T 93 -9.9 -4.67234 | opp_overlap 4292260, overlap 4292239 AGGTAATCTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT TERM 5389 4292260 - 4292277 + T 75 -9.9 -3.5774 | opp_overlap 4292239 4292260 AGGTAATCTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT yjcF 4293665 - 4292373 - | hypothetical protein TERM 5390 4293741 - 4293756 + r 80 -6.2 -4.80736 | opp_overlap 4293740 GACTGTCAAAAATCG CTCATT TTTT AATGAG TTTATTTGTTTAATA actP 4295492 - 4293843 - | acetate permease TERM 5391 4295457 - 4295485 + g 72 -6 -4.33105 | gap 1 GTTAGCTGCGAAAGG GAG-TGTGGCGGC AAGC GCCGTCAGAACTC TTTTCATGATGCTTG yjcH 4295803 - 4295489 - | hypothetical protein TERM 5392 4295725 - 4295740 + g 75 -5.4 -4.62783 | overlap 4295726 TAATCGACAGGATGG TGGCAA ACCG TTGCCG TTTTTCGACTAACTC TERM 5393 4295926 - 4295895 - H 78 -12.2 -2.52464 | overlap 4295905 4295906 CCCTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATCAATGCCTGATGC TERM 5394 4295952 - 4295906 - H 70 -10.7 -2.57931 | opp_overlap 4295937, overlap 4295895 4295905 4295932 4295933 TGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCA ATCAA TGCCTGATGCGACGCTGTCGC GTCTTATCAGGCCTA TERM 5395 4295965 - 4295932 - H 73 -9.5 -3.34344 | opp_overlap 4295937, overlap 4295906 4295905 4295933 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAAACCGTTACCG TERM 5396 4295964 - 4295933 - H 81 -13 -2.60392 | opp_overlap 4295937, overlap 4295906 4295905 4295932 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAAACCGTTACC TERM 5397 4295937 - 4295955 + H 79 -11 -3.30124 | opp_overlap 4295906 4295905 4295933 4295932 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA TERM 5398 4297679 - 4297695 + H 78 -6.5 -4.64676 | opp_overlap 4297679, overlap 4297680 CGCCTTCCCAGATGA TGGCGGT GCG ATCGCCG TTTTCTTGCAGATGG TERM 5399 4298335 - 4298315 - H 100 -9.7 -5.51353 | overlap 4298316 GAAAAACAATAAAAA CCGCCATTG CAA CAATGGCGC AATTCGGATGAAGCC TERM 5400 4298334 - 4298316 - H 95 -13.2 -3.87151 | overlap 4298315 AAAAACAATAAAAAC CGCCATTG CAA CAATGGCG CAATTCGGATGAAGC TERM 5401 4298966 - 4298948 - g 72 -8 -3.8709 | opp_overlap 4298962 AAACCTTTTGAGAAA GCCGGACG TTT CGACCAGC AATCGATGGTTTGCG nrfA 4298354 - 4299790 + | cytochrome c nitrite reductase nrfB 4299835 - 4300401 + | cytochrome c-type protein NrfB TERM 5402 4300501 - 4300550 + G 75 -11.5 -2.93703 | gap 1, overlap 4300503 TGAATATCAATGGGG TGCGTTACGGCATGGTGCATGACG AGT CGTTATGCATCG-GCTGTACCGCC TGTATGGATGCTTGT nrfC 4300398 - 4301069 + | formate-dependent nitrite reductase nrfD 4301066 - 4302022 + | formate-dependent nitrate reductase, transmembrane protein TERM 5403 4302652 - 4302683 + G 83 -12.9 -3.07935 | overlap 4302650 GCGGCGAGTTTGATG CGGCCAGCGCCCG AATTTG CTGGCGCTGGGCG TTACCTGGCTGGAGT TERM 5404 4303531 - 4303543 + G 100 -10.5 -4.82901 | opp_overlap 4303531 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTATGAAGCACG TERM 5405 4303543 - 4303531 - g 76 -10.5 -3.34344 | opp_overlap 4303531 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTATGAAGCACG nrfE 4302102 - 4303760 + | heme lyase subunit NrfE nrfF 4303753 - 4304136 + | formate-dependent nitrite reductase complex subunit NrfF nrfG 4304133 - 4304729 + | formate-dependent nitrite reductase complex subunit NrfG TERM 5406 4306194 - 4306210 + G 70 -6.5 -4.28713 | GTAGCGTAGGTATTC CGCTGGA AGG TCTGGCG TTTATTGCTGGTGTT gltP 4305071 - 4306384 + | glutamate/aspartate:proton symporter TERM 5407 4306416 - 4306390 - T 86 -13 -3.30203 | opp_overlap 4306392, overlap 4306385 4306392 GGATCAATAATTGAA GATTGCCGGGGA TAT CCCCCGGCAATG TGTGGATGCCTGATG TERM 5408 4306392 - 4306414 + T 87 -14.9 -2.91912 | opp_overlap 4306390 4306385 4306392 ATCAATAATTGAAGA TTGCCGGGG ATATC CCCCGGCAA TGTGTGGATGCCTGA TERM 5409 4306414 - 4306392 - T 100 -15.6 -3.21153 | opp_overlap 4306392, overlap 4306390 4306385 ATCAATAATTGAAGA TTGCCGGGGA TAT CCCCCGGCAA TGTGTGGATGCCTGA TERM 5410 4306423 - 4306457 + T 70 -10.7 -2.53911 | overlap 4306433 CCGGCAATGTGTGGA TGCCTGATGCGACGC TTGCC GCGTCTTATCAGGCC TACCTTAACCGTTGG TERM 5411 4306462 - 4306476 + T 80 -7.2 -4.62302 | CTTATCAGGCCTACC TTAACC GTT GGTTAA TTTTTCAAACTCTTC yjcO 4307130 - 4306462 - | hypothetical protein TERM 5412 4307230 - 4307211 - R 100 -13.6 -5.66684 | GAATGGATAAAAAAA CAGCCTCC GAAA GGAGGCTG TAGAAAGGACTGTAT TERM 5413 4307303 - 4307355 + r 73 -7.9 -4.19177 | gap 4, opp_overlap 4307301 TACTCGTCAATCACG TACTGC-TCG-GCG-G-CGCGCTGATC GGA GATCGGCTCGACGCGCACGGCGCAGTA TTTGTATTCCGGCGT TERM 5414 4307531 - 4307564 + r 74 -8.3 -3.91897 | gap 1 ACCAATGCCTCATCT TCAATACC-CAGACGT TTG GCGTCTTCGGTATTGA TTTGTGCGTAGCCAG TERM 5415 4308078 - 4308089 + r 77 -7.2 -4.48987 | GCAAAATGACATCCG CCGC CGAC GCGG TTTTGGTTATAAAGA TERM 5416 4308644 - 4308679 + r 93 -9.9 -4.69053 | gap 1 TACTCTTCAAAGCCT TCTGTACGG-GAAGCG ACGAA CGCTTTGTCGTACAGA TTTTCTTCAATAATG TERM 5417 4309583 - 4309558 - R 95 -11.9 -4.10552 | overlap 4309560 CGTGACGAAACGAAA TACCGCGTGAC AGCC ATCACGCGGCA GACATTTTATTTTTT TERM 5418 4309581 - 4309560 - R 88 -12.3 -3.64541 | overlap 4309558 TGACGAAACGAAATA CCGCGTGAC AGCC ATCACGCGG CAGACATTTTATTTT yjcP 4311056 - 4309590 - | putative outer membrane efflux protein MdtP TERM 5419 4310075 - 4310058 - G 70 -4.1 -4.62872 | overlap 4310059 ATCAAGGCCGAAAAA CGCTTTG ATAT CAAAGCT CGGATAGAACAACGC TERM 5420 4310902 - 4310927 + g 72 -6.9 -4.21141 | gap 1 TGCGGCCAGCCGGAG CTGGCAAGATGA ATA TCATCG-GCCAG TTTGATTTGTTCCGG yjcQ 4313095 - 4311053 - | multidrug efflux system protein MdtO TERM 5421 4312847 - 4312823 - G 71 -2.7 -4.8048 | overlap 4312825 4312826 TTTGTAGATCAAAAA CAGGCTGCCGA TCT CCAGCACCGTG GCAACCACAAACAAG yjcR 4314126 - 4313095 - | multidrug resistance protein MdtN TERM 5422 4313637 - 4313651 + gr 88 -12.8 -3.62597 | opp_overlap 4313627 4313625 TAAGATCCGCTTCTG CGGCGC GCT GCGCCG TTCTTGCACGGTCAA TERM 5423 4313729 - 4313751 + gr 90 -7.6 -4.85599 | CGTAATGTATCTGTG GCCTGTTTCG CGG CGGCACGGGC TTTTTCTACCGTGGC TERM 5424 4313992 - 4314007 + gr 70 -9 -3.39895 | ATCAATGGTATCTGC TGACGC GTAA GCGTCA TTAGTTGATGGCGCA SF4143 4314412 - 4314092 - | putative IS1 encoded protein insB 4314487 - 4314990 + | IS1 ORF2 TERM 5425 4315027 - 4315049 + T 100 -13.5 -5.28176 | AACAAATATTGATGG GAAGCCTCC ATAAC GGAGGCTTC TTTTTTATGGCTGGC ssb 4315655 - 4315119 - | single-strand DNA-binding protein uvrA 4315909 - 4318731 + | excinuclease ABC subunit A TERM 5426 4318739 - 4318757 + T 100 -12.4 -4.55128 | overlap 4318747 TGCTGTAATCGTTAA GGCCGCTT TCT GAGCGGCC TTTTCCTTTCAGAGT yjbR 4319122 - 4318766 - | hypothetical protein TERM 5427 4318954 - 4318968 + g 74 -7.8 -4.07568 | overlap 4318953 GACGTAGCAGCTCCG CCAGCT CCG GGCTGG TTTTCAGCGAAACAG yjbQ 4319542 - 4319126 - | hypothetical protein aphA 4320366 - 4319653 - | acid phosphatase/phosphotransferase TERM 5428 4320092 - 4320107 + g 86 -4 -5.40072 | TTCAGATAATCTTCG CTTTCT GGCG AGAAGG TTTTTTTGCCGCGCC SF4150 4320729 - 4321136 + | hypothetical protein TERM 5429 4321442 - 4321465 + T 100 -14.6 -3.79668 | CAGTTTAATTTCACT GCAGGCTGGG TAAC TCCAGCCTGC TTTCCTGCATTACAT tyrB 4322668 - 4321475 - | aromatic amino acid aminotransferase TERM 5430 4322497 - 4322476 - G 72 -6.5 -4.42806 | gap 1 CCATCGGTAAATAAA GCGAAGCGCC ATG GG-GCTGCGC ATTCAGGCGCGCTTC alr 4324000 - 4322921 - | alanine racemase dnaB 4325468 - 4324053 - | replicative DNA helicase TERM 5431 4324120 - 4324145 + g 74 -8.9 -3.9281 | CCGTTAAAGGTCAGG CGTACCGTCCC GATT GGGCCGTTACG TTGTTTACCGATAAT TERM 5432 4324796 - 4324816 + g 100 -6.7 -5.80364 | opp_overlap 4324795 4324796 CGACGATGATCAAAT CCGACGGCT GCA AGCCAGCGG TTTTTTTGTTGAGAT TERM 5433 4325116 - 4325133 + g 77 -3.3 -5.02476 | overlap 4325118 GCATAAGCACTGATG TTCGCCG CACT TGGCGTA TTTTTTGACAGCTCT TERM 5434 4326092 - 4326082 - g 88 -8.2 -4.59853 | overlap 4326071 4326083 GGAACCGCGCAAAAA GCGC AGA GCGC GCTAAAAGCCGGCGC qor 4325551 - 4326534 + | quinone oxidoreductase, NADPH-dependent TERM 5435 4326565 - 4326541 - T 100 -10 -4.77775 | opp_overlap 4326543, overlap 4326543 ATTCCATAAAAGAAA TAGGGCTTCC ACCTG GGAAGCCCTT TCTTTTTATAGTTCG TERM 5436 4326543 - 4326563 + T 100 -12.6 -5.00267 | opp_overlap 4326541 4326543 TCCATAAAAGAAATA GGGCTTCC ACCTG GGAAGCCC TTTCTTTTTATAGTT TERM 5437 4326563 - 4326543 - T 95 -12.6 -3.99938 | opp_overlap 4326543, overlap 4326541 TCCATAAAAGAAATA GGGCTTCC ACCTG GGAAGCCC TTTCTTTTTATAGTT pspG 4326942 - 4326700 - | phage shock protein G TERM 5438 4327045 - 4327022 - R 100 -13.1 -4.43681 | opp_overlap 4327019 4327016 GATTTAACAGCAAAA CGCCCCGCG ACGGTG CGCAGGGCG TGGTGAATTTGACTA yjbN 4328095 - 4327076 - | tRNA-dihydrouridine synthase A TERM 5439 4328257 - 4328243 - R 85 -7.2 -5.09259 | CATTGCAAAAGAAAA TTGAGA TCC TCTCAA GGCATGAAGCTCTCA TERM 5440 4328434 - 4328413 - R 100 -9.5 -5.4251 | opp_overlap 4328413 4328416 TTGATAGAGAAAAAA GAACCCAAT AAAT ATTGGGTCC TTTTATATAATGCCT TERM 5441 4328413 - 4328434 + r 80 -7.3 -4.57755 | opp_overlap 4328413, overlap 4328416 TTGATAGAGAAAAAA GAACCCAAT AAAT ATTGGGTCC TTTTATATAATGCCT yjbM 4329183 - 4328476 - | hypothetical protein yjbL 4329461 - 4329207 - | hypothetical protein TERM 5442 4329897 - 4329909 + G 71 -9.1 -3.49858 | TGAGTCTGCAGGATG GCGCT ATC AGCGC TTATGATCTGCTTGA yjbK 4329779 - 4330294 + | zinc uptake transcriptional repressor yjbJ 4330545 - 4330336 - | putative stress-response protein TERM 5443 4330569 - 4330588 + r 73 -4.3 -4.77567 | opp_overlap 4330582 CCTCATCGTTAGGTT GTGAATG AGAGTA CGTTCAC TTTTCTTCTGAACGT dinF 4331986 - 4330661 - | DNA-damage-inducible SOS response protein TERM 5444 4332045 - 4332022 - R 100 -16 -4.94262 | GAGATGAAAAACAAA CCGCGACGCC AAGC GGCATCGCGG TCTCAGAGATATGTT lexA 4332667 - 4332059 - | LexA repressor dgkA 4333145 - 4332777 - | diacylglycerol kinase plsB 4333316 - 4335739 + | glycerol-3-phosphate acyltransferase TERM 5445 4335840 - 4335808 - T 72 -6.2 -4.29326 | TGCAAATTCAATAAA TTGCGATTCACCGG GTAGG CCTGAGAAGCGCAA CGCATCAGGCAACCC TERM 5446 4335881 - 4335864 - T 91 -11.3 -4.35604 | opp_overlap 4335864 GCAACCCAGAAGAAA GCCGGAT GATC ATCCGGC TTTTTTACATCATCA TERM 5447 4335864 - 4335881 + T 100 -11.3 -5.1101 | opp_overlap 4335864 GCAACCCAGAAGAAA GCCGGAT GATC ATCCGGC TTTTTTACATCATCA ubiA 4336766 - 4335894 - | 4-hydroxybenzoate octaprenyltransferase ubiC 4337276 - 4336779 - | chorismate pyruvate lyase TERM 5448 4338127 - 4338160 + r 73 -4 -4.88407 | AATGTTTTCTTCATA TTCTCAATAAAGTT TTTATT AACAATATTGAGAA TTTTTAATTGCATCA TERM 5449 4338941 - 4338927 - R 74 -5.8 -4.70659 | TTTTATATTTAAAAA TATATC ACT GATATA AATAAAGTAATCTCT TERM 5450 4339275 - 4339256 - R 100 -11.4 -5.71983 | opp_overlap 4339255 4339254 GGAAGCATAAAAAAA GGTGCGCC AGGA GACGCACC AGTTGTTGCAAAATC malM 4340228 - 4339308 - | maltose regulon periplasmic protein TERM 5451 4340296 - 4340309 + r 75 -9.5 -3.62096 | opp_overlap 4340291 4340296 AACCCGATAATCAGA GGGGC TTTC GCCCC TTTCAGATAATGACA TERM 5452 4340309 - 4340296 - R 70 -9.5 -2.97017 | opp_overlap 4340296, overlap 4340291 AACCCGATAATCAGA GGGGC TTTC GCCCC TTTCAGATAATGACA TERM 5453 4340332 - 4340371 + r 77 -7 -4.4261 | overlap 4340329 4340333 4340334 4340346 TAATGACAACCTGTT TTTATGCCGGATGCGGCG TAAA CGCCTTATCCGGCCCAGG TTTTGCTATTACCAC lamB 4341717 - 4340380 - | maltoporin malK 4342907 - 4341792 - | maltose/maltodextrin transporter ATP-binding protein TERM 5454 4342236 - 4342212 - G 72 -7.9 -3.97368 | gap 1 TGGCGAACCGATAAA TCCGGC-GAC AAAACG GTCTGCCGGA TAGTGGTACAGTTCC TERM 5455 4342470 - 4342446 - G 75 -4.4 -4.7497 | gap 2 TTCATCGAGCAAAAA TACGCT--TGGC TCG GCCACCAGCGTA CGGCCAATCGCCACG malE 4343272 - 4344462 + | maltose ABC transporter periplasmic protein malF 4344616 - 4346160 + | maltose transporter membrane protein malG 4346175 - 4347065 + | maltose transporter permease TERM 5456 4347136 - 4347153 + F 100 -12.7 -5.99154 | TTGTGACTATTATTC GGCGCTC CACG GAGCGCC TTTTTTTCTTTCGTC TERM 5457 4347965 - 4347983 + G 91 -9 -4.65747 | TTTTCGGGCAACTTT TAGTTTAC TGC GTAAACTA TTTTATTGCCCGTTC TERM 5458 4348366 - 4348352 - g 74 -7.8 -4.11484 | opp_overlap 4348364, overlap 4348353 CGGAAGTGTTCAAAA CGCTGG GGG CCAGCA CGGATATCGCGCTGT xylE 4347436 - 4348911 + | D-xylose transporter XylE TERM 5459 4348920 - 4348951 + T 82 -7.2 -4.73388 | overlap 4348922 GCTGTAATCTTCCTG TCCAGCACGCCG CGCCATTT CGGCGTGCTGTC TTTTTACTCCCGCTT TERM 5460 4348922 - 4348949 + T 100 -14.2 -3.98256 | overlap 4348920 TGTAATCTTCCTGTC CAGCACGCCG CGCCATTT CGGCGTGCTG TCTTTTTACTCCCGC yjbA 4349365 - 4348955 - | phosphate-starvation-inducible protein PsiE TERM 5461 4349583 - 4349568 - R 78 -5.4 -4.74103 | CCGGTAATTCAAAAA TCACCC ATTC AGGTGA TTCCCAGCCACCAGC yjbH 4352056 - 4349960 - | hypothetical protein yjbG 4352793 - 4352056 - | hypothetical protein yjbF 4353458 - 4352790 - | hypothetical protein TERM 5462 4353473 - 4353452 - G 80 -11.7 -3.32343 | opp_overlap 4353455, overlap 4353455 TCCAGAGGGGCAGAA TAACCACAC CGGA GTGTGGTTA TGGTAAATCCCTTCA TERM 5463 4353455 - 4353470 + g 71 -9 -3.42699 | opp_overlap 4353452 4353455 AGAGGGGCAGAATAA CCACAC CGGA GTGTGG TTATGGTAAATCCCT TERM 5464 4353470 - 4353455 - G 76 -9 -3.80174 | opp_overlap 4353455, overlap 4353452 AGAGGGGCAGAATAA CCACAC CGGA GTGTGG TTATGGTAAATCCCT yjbE 4353784 - 4353542 - | hypothetical protein TERM 5465 4354122 - 4354098 - R 100 -14.4 -4.40358 | opp_overlap 4354098 ATTTATCTGATAAAA CAATGCCGAC TTATT GTCGGCATTG TTTTTAAGGTTATTT TERM 5466 4354098 - 4354122 + r 100 -14.4 -4.7153 | opp_overlap 4354098 ATTTATCTGATAAAA CAATGCCGAC TTATT GTCGGCATTG TTTTTAAGGTTATTT pgi 4355896 - 4354247 - | glucose-6-phosphate isomerase TERM 5467 4355820 - 4355787 - G 100 -14.8 -4.93318 | gap 1, opp_overlap 4355783 4355781 GAGAACTTAGAAAAA CGATCGCCG-TCTTT AGCAA AAAGATCGGCGATCG TAACGTCTTTCATTT TERM 5468 4357005 - 4356991 - g 70 -4.2 -4.68908 | overlap 4356992 4357001 GGTAGCGAAAATAAA GGTCGT ACA ACGACG CTTGGCCGTGGAGGC TERM 5469 4357389 - 4357402 + G 70 -6.7 -4.12188 | GCTGCATTCTCGCGG CTTCC TCGC GGAAG TTTTCGGCATCCTCG lysC 4356421 - 4357770 + | aspartate kinase III SF4182 4359537 - 4357936 - | ISSfl4 ORF3 TERM 5470 4359284 - 4359301 + g 82 -9.1 -4.19238 | overlap 4359272 TCTTCCAGAAGATTT CTGGCTG TGTT CAGCCGG TTTTCCAGTTCCGAC TERM 5471 4359306 - 4359343 + g 70 -6.2 -4.1585 | overlap 4359307 4359311 TGTTCAGCCGGTTTT CCAGTTCCGACAGTCG TTTTTC TGCCTGTCGGATCTGA TTTTCAAGCTTATGA SF4183 4359830 - 4359534 - | ISSfl4 ORF2 SF4184 4360556 - 4359882 - | ISSfl4 ORF1 TERM 5472 4360220 - 4360208 - G 73 -9.1 -3.62046 | CGATCCGGGCAACAA CAGCC CCA GGCTG TAACGCCTGCTTAGC TERM 5473 4360560 - 4360587 + H 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG SF4185 4360716 - 4361081 + | insertion sequence 2 OrfA protein SF4186 4361039 - 4361944 + | insertion element IS2 transposase InsD TERM 5474 4362064 - 4362040 - T 79 -10.1 -3.73224 | opp_overlap 4362043 GCAGTTGTTATTAAA GGATACCCT TTTTACG AGGGTATCC CTTCAGACTGATAAC yjiI 4362728 - 4362144 - | RNA 2'-phosphotransferase-like protein TERM 5475 4362975 - 4362964 - H 95 -3 -5.90231 | opp_overlap 4362964 ACAAACACAAAAAAA CAAT GGGG ATTG TTATGACACAACAAG yjiH 4362966 - 4363661 + | hypothetical protein TERM 5476 4363706 - 4363681 - g 70 -4.7 -4.57569 | opp_overlap 4363699 4363702 4363703 TCAGGTCCGCAAAAA CGTCATGGATA TGTT TATCGATGGCG CGCGCCGTGGCTTTA yjiG 4363658 - 4364119 + | hypothetical protein TERM 5477 4364298 - 4364319 + G 75 -5.1 -4.71426 | gap 1, overlap 4364299 4364299 CGGTTGTCGATCTCA GC-GGGCAGA TCC TCTGCCCAGG TTTTATTGATCAACA iadA 4364132 - 4365304 + | isoaspartyl dipeptidase yjiE 4365369 - 4366280 + | putative DNA-binding transcriptional regulator yjiD 4366674 - 4366273 - | hypothetical protein insB 4367346 - 4366951 - | IS1 ORF2 insA 4367648 - 4367373 - | IS1 ORF1 TERM 5478 4367833 - 4367819 - H 72 -5.8 -4.40333 | TGTAAATAATATAAA TTGATA ACA TATCAA ATACATCAAAAATAC yjiC 4368115 - 4368945 + | hypothetical protein TERM 5479 4369048 - 4369072 + T 74 -8.6 -3.8512 | opp_overlap 4369022 4369021 4369019 4369015 4369048 TCTTAATTTAAGAAA GCGCAAGG AACGTTTAC CCTTGCGC TTATTATAATAAGTC TERM 5480 4369072 - 4369048 - T 83 -9.3 -4.2528 | opp_overlap 4369048, overlap 4369022 4369021 4369019 4369015 TCTTAATTTAAGAAA GCGCAAGGA ACGTTTA CCCTTGCGC TTATTATAATAAGTC uxuR 4369859 - 4369086 - | DNA-binding transcriptional repressor UxuR TERM 5481 4370049 - 4370018 - R 100 -12.5 -4.94243 | GCAAAAAAACGAAAA CTGGTCAACCAAA TATCAG TTTGATTGACCAG TAAGTCTGTAGGGTA uxuB 4371534 - 4370074 - | D-mannonate oxidoreductase TERM 5482 4371268 - 4371282 + g 72 -4.9 -4.62336 | GATAATTTTCAGCTC GGTGC TTTCT GCGCC TTTTTCCGCTACGGT TERM 5483 4371301 - 4371312 + g 86 -5.8 -5.15117 | TTCCGCTACGGTGTA CAGC AGTT GCTG TTTTTTCAGGTTTTC TERM 5484 4371608 - 4371584 - R 100 -15 -3.58329 | opp_overlap 4371580, overlap 4371580 GCAAGGAAGAAGGAA CCGGCACGGC GCGCA GCCATGCCGG TGGGTATTAACGGCT uxuA 4372799 - 4371615 - | mannonate dehydratase TERM 5485 4371740 - 4371770 + g 70 -6.9 -4.0098 | gap 1 CGTCCAGCATCTGAT GACCGTGGTCCGGA CGCA TCGGGATCA-GGTC TTCTTTGCCTTCCGC gntP 4373139 - 4374482 + | fructuronate transporter TERM 5486 4374519 - 4374488 - T 95 -11.6 -4.19746 | gap 1, overlap 4374490 4374493 GGTAGCGTAAAAGAA CA-CCAGAGCCTGCC AAT GGCAGGCTCAGACTG ATGACTAAAGTCTAA TERM 5487 4374516 - 4374490 - T 100 -14.4 -3.69506 | overlap 4374488 4374493 TAGCGTAAAAGAACA CCAGAGCCTGCC AAT GGCAGGCTCAGA CTGATGACTAAAGTC TERM 5488 4374513 - 4374493 - T 100 -16.9 -2.94356 | overlap 4374490 4374488 CGTAAAAGAACACCA GAGCCTGCC AAT GGCAGGCTC AGACTGATGACTAAA fimH 4375635 - 4374733 - | minor fimbrial subunit, D-mannose specific adhesin TERM 5489 4375529 - 4375559 + g 70 -6.9 -4.07885 | gap 1, opp_overlap 4375517 4375515 ACATTAGCGCTGCCA CCGCCAATAGGGAT AGCG GTACC-ATTGGCGG TTTTACAGGCGAATG fimG 4376158 - 4375655 - | minor fimbrial subunit, precursor polypeptide fimF 4376701 - 4376171 - | minor fimbrial subunit, precursor polypeptide TERM 5490 4376638 - 4376609 - G 82 -12.9 -2.87931 | GTTATCTCTGACATA GCCGCGGATAGTA ATCG TGCTATCCGCAGC CAAAACGCGACTTAC TERM 5491 4377378 - 4377390 + r 79 -10.5 -3.56643 | TTACCATCGCCTCCC CCGGC ATA GCCGG TTTGCACGCTATAAC insB 4379170 - 4378775 - | IS1 ORF2 insA 4379472 - 4379197 - | IS1 ORF1 fimC 4380915 - 4380190 - | periplasmic chaperone TERM 5492 4380604 - 4380624 + g 88 -2.6 -5.54192 | opp_overlap 4380606, overlap 4380606 GTTATTTGTTGCATC AAGAATAC GTAAG GTATTCTC TTTTTTTCCCTTCAT TERM 5493 4380606 - 4380622 + g 70 -5.2 -4.40173 | opp_overlap 4380606, overlap 4380604 TATTTGTTGCATCAA GAATAC GTAAG GTATTC TCTTTTTTTCCCTTC TERM 5494 4380747 - 4380759 + g 77 -6.3 -4.62069 | CATTATTTGTCACGG CAAGT TGC ACTTG TTTTTGCCCTGCCGG fimI 4381590 - 4380952 - | fimbrial protein fimA 4382104 - 4381556 - | major type 1 subunit fimbrin (pilin) fimE 4383181 - 4382585 - | tyrosine recombinase TERM 5495 4383296 - 4383267 - R 91 -8 -5.10064 | CCCAATAGATAAAAA GATAACCACACA CGAAGT TATGTGGCTATC AGTCAATTACATTAA TERM 5496 4383346 - 4383331 - R 83 -4 -5.38839 | opp_overlap 4383338, overlap 4383333 CATACAAAAATAAAA TATCAC TGAT GTGACA ACATCTATTTTCATT TERM 5497 4383679 - 4383667 - R 72 -5.5 -4.3898 | opp_overlap 4383672, overlap 4383672 ACTATCTCTATAAAA CAGCA TGA CGCTG TCGTCCTCTGGCTCT fimB 4384261 - 4383776 - | recombinase; regulator for fimA TERM 5498 4383967 - 4383941 - G 81 -5.8 -4.85599 | CTTACGTGATAAAAA TACCCACTCGCT CTC AGCATGCGGATA AGAAGTACGGATACT TERM 5499 4384297 - 4384320 + H 76 -4.6 -4.94902 | overlap 4384287 GACGCGCACTAGCTG TGCTGGGTTA GCAA TAATCCAACA TTTTTATCCTGATTA TERM 5500 4385074 - 4385084 + H 78 -5.4 -4.7923 | overlap 4385079 ACTCTCACTGAGTTA GCTT GCA AAGC TTTCTTTGTTTAGAT yjhA 4385883 - 4386431 + | hypothetical protein TERM 5501 4387328 - 4387314 - gf 70 -5 -4.4648 | AGGTTCACGAGAAAA TTACCA GAA CGGTAA GAACTATGCGCATGA yjhT 4386343 - 4387557 + | hypothetical protein TERM 5502 4387565 - 4387584 + F 76 -12.1 -2.69246 | opp_overlap 4387559 4387558, overlap 4387561 4387558 AAAACTAACGCTTCA GGGCCCC GGTAAA GGGGCCC TGCTATCAATTTGTC yjhS 4387844 - 4388602 + | hypothetical protein insB 4389466 - 4389071 - | IS1 ORF2 insA 4389768 - 4389493 - | IS1 ORF1 TERM 5503 4390017 - 4390006 - g 74 -3 -5.02074 | TGACGTTCCAAAAAA TCAT CGTG ATGA CTTACCTATTGCAAT SF4216 4389863 - 4390558 + | DeoR family transcriptional regulator TERM 5504 4390691 - 4390702 + F 72 -5.8 -4.3898 | CATCCTTGACCAGTA GCCA GATA TGGC TTTTGTCGCAGTCCT SF4217 4391028 - 4391312 + | hypothetical protein SF4218 4391369 - 4392181 + | hypothetical protein SF4220 4392824 - 4392501 - | putative IS1 encoded protein insB 4392899 - 4393402 + | IS1 ORF2 SF4222 4393559 - 4393897 + | IS911 ORF1 TERM 5505 4394003 - 4393983 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 5506 4394355 - 4394344 - g 77 -5.8 -4.63218 | opp_overlap 4394349 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SF4223 4393924 - 4394763 + | IS911 ORF2 SF4224 4395949 - 4394738 - | putative P4-type integrase TERM 5507 4395482 - 4395459 - G 86 -12.4 -3.53444 | GTACGCTGCTGTAAA CGGGCGGC AACTTCGA GCCGCCCG GATGACTCGACTGCT TERM 5508 4396133 - 4396118 - H 100 -9 -5.64274 | opp_overlap 4396116 4396118 TTAGGCACAAAAAAA GACGTC CGTT GACGTC TATTGATGTTCCGAT yjgB 4396386 - 4397447 + | putative oxidoreductase TERM 5509 4397453 - 4397476 + F 74 -10.2 -3.21872 | CGACTTCTGATCCCT TTGCCGGGTG CTGT CGCCCGGCAC TTAAATCTCTTTGGA TERM 5510 4398535 - 4398549 + G 70 -7 -4.07568 | overlap 4398527 CGGTAATCGTGTTCA GCACGC TTT GCGGGC TTTTACGCCAAAAGA yjgR 4397528 - 4399078 + | hypothetical protein TERM 5511 4399188 - 4399173 - T 93 -10.4 -4.57882 | opp_overlap 4399173 GTCAACAATAATAAA GGGAGC TTTC GCTCCC TTGTTAGATTACGAT TERM 5512 4399173 - 4399188 + T 83 -10.4 -3.73336 | opp_overlap 4399173 GTCAACAATAATAAA GGGAGC TTTC GCTCCC TTGTTAGATTACGAT yjgQ 4400279 - 4399197 - | hypothetical protein yjgP 4401379 - 4400279 - | hypothetical protein TERM 5513 4400489 - 4400458 - G 75 -4.4 -4.73613 | gap 1, overlap 4400461 GGATCAGGAAGAAAA GTAGATACAG-CAGC ATG GCTGGCAGCATCGAC AGTACGCGTCCCTGA TERM 5514 4400508 - 4400494 - G 73 -11.4 -2.65264 | GCAGCATCGACAGTA CGCGTC CCT GACGCG GGTTAACCACGCTCA TERM 5515 4403108 - 4403083 - g 70 -4.5 -4.54727 | opp_overlap 4403085, overlap 4403084 4403085 TCTGGTAAAGCAAAA GGCGCAACCGG TCGT CCGGTAGCGTT GCTGGCACAGTTCCT TERM 5516 4403106 - 4403085 - g 73 -11.5 -2.5893 | opp_overlap 4403085, overlap 4403084 4403083 TGGTAAAGCAAAAGG CGCAACCGG TCGT CCGGTAGCG TTGCTGGCACAGTTC TERM 5517 4403085 - 4403106 + G 77 -11.5 -3.14881 | opp_overlap 4403085 4403084 4403083 TGGTAAAGCAAAAGG CGCAACCGG TCGT CCGGTAGCG TTGCTGGCACAGTTC pepA 4401646 - 4403157 + | leucyl aminopeptidase TERM 5518 4403570 - 4403552 - g 70 -4.5 -4.56597 | gap 1, opp_overlap 4403552 GCCTGGCCGCAAAAA CGCAGCAG CAGC CCGC-GCG ATATATTGATTAGTC holC 4403291 - 4403734 + | DNA polymerase III subunit chi TERM 5519 4403965 - 4403949 - g 72 -4.3 -4.62783 | overlap 4403952 CATGCAGGGCAAAAA CACCCTG TGG CAGGTCG GTACTGACCACGCCG TERM 5520 4405229 - 4405209 - g 74 -7.5 -4.07568 | overlap 4405211 TGGCTGGCCGGAAAA TACCGACGC CCT GCGTCAGTT CCACCCAACCAGCGT TERM 5521 4405227 - 4405211 - g 77 -10.1 -3.63744 | overlap 4405209 GCTGGCCGGAAAATA CCGACGC CCT GCGTCAG TTCCACCCAACCAGC valS 4403734 - 4406589 + | valyl-tRNA synthetase TERM 5522 4406635 - 4406608 - T 87 -9.8 -4.3014 | opp_overlap 4406612, overlap 4406612 ACACAGTGATGAAAA CGAAGGCCGGAG CATG CTCCGGCCTTTT TTATCTCTTACAGAA TERM 5523 4406631 - 4406612 - T 100 -15 -3.72073 | opp_overlap 4406612, overlap 4406608 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC TERM 5524 4406612 - 4406631 + T 100 -15 -5.47431 | opp_overlap 4406612 4406608 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC yjgN 4407839 - 4406643 - | hypothetical protein TERM 5525 4406685 - 4406696 + g 70 -5.8 -4.17263 | opp_overlap 4406684 TCCCCGAGAAATACT GGCT AAGA AGCC TTTATCTGGTTGTTC TERM 5526 4407821 - 4407799 - G 79 -2.6 -5.3104 | opp_overlap 4407802 4407804, overlap 4407804 CCATGAAAAACAAAA GAATGGGACG GAA CATCCATTTC ATTAATAACTTGAGC SF4233 4408032 - 4408535 + | hypothetical protein TERM 5527 4408566 - 4408541 - T 100 -9 -5.47399 | opp_overlap 4408541 CGAACTCTAAAAAAA TGCCCGCTAG TATGTG CTATCGGGCA TTTTAATCAATTAAT TERM 5528 4408541 - 4408566 + T 87 -9.7 -4.31379 | opp_overlap 4408541 CGAACTCTAAAAAAA TGCCCGCTAGT ATGT GCTATCGGGCA TTTTAATCAATTAAT yjgD 4408997 - 4408581 - | hypothetical protein argI 4409159 - 4410172 + | ornithine carbamoyltransferase subunit I insA 4410244 - 4410519 + | IS1 ORF1 insB 4410546 - 4410941 + | IS1 ORF2 TERM 5529 4411796 - 4411765 - T 71 -7.4 -3.85698 | overlap 4411766 CGCTCTTTTCACAAA CTCGCCGTAAAC CTGGAGTT ATTTACGGCGAA AAGTCATCACGCCAT yjgK 4412255 - 4411803 - | hypothetical protein yjgJ 4412654 - 4412400 - | hypothetical protein yjgI 4413064 - 4413777 + | oxidoreductase TERM 5530 4413797 - 4413822 + F 91 -8.3 -4.93877 | opp_overlap 4413797 4413796 CTACGCTCAATTAAG CCCAGCCATTA TCCA TGATGTCTGGG TTTTGTTTACTAACG yjgH 4413909 - 4414304 + | hypothetical protein yjgG 4414605 - 4414273 - | hypothetical protein TERM 5531 4414416 - 4414402 - Gf 100 -2.8 -5.95286 | ATGAAAAAGAAAAAA GCAG GAAATGT CTGC AATTATTGATACCGA TERM 5532 4414674 - 4414691 + GH 100 -12.7 -5.81412 | GATCACCCATTCCCA GCCCCTC AATC GAGGGGC TTTTTTTTGCCTAGG pyrL 4414585 - 4414719 + | pyrBI operon leader peptide TERM 5533 4414988 - 4414978 - g 71 -2.4 -5.02074 | TCACTGGGTAAAAAA GGCG AAA CGCT GGCCGATACCATTTC pyrB 4414723 - 4415658 + | aspartate carbamoyltransferase catalytic subunit pyrI 4415671 - 4416132 + | aspartate carbamoyltransferase regulatory subunit TERM 5534 4416176 - 4416151 - f 93 -10.5 -4.63218 | opp_overlap 4416151 CGGTTGGTAATAAAA GTCTGGCTC CCTATAAT GAGCCAGAC TTTTTACCGCTGTAA TERM 5535 4416151 - 4416176 + F 93 -10.5 -4.61231 | opp_overlap 4416151 CGGTTGGTAATAAAA GTCTGGCTC CCTATAAT GAGCCAGAC TTTTTACCGCTGTAA yjgF 4416166 - 4416591 + | hypothetical protein TERM 5536 4416604 - 4416623 + T 74 -10.7 -3.14468 | opp_overlap 4416604 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA TERM 5537 4416623 - 4416604 - T 83 -10.7 -3.65827 | opp_overlap 4416604 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA mgtA 4419493 - 4416797 - | magnesium-transporting ATPase MgtA TERM 5538 4419160 - 4419144 - G 70 -5.1 -4.41348 | CCTGCGGCAAATAAA TCTTCCG TGG CGTAAGA AATAGCACCAAGAAT treR 4419872 - 4420819 + | trehalose repressor TERM 5539 4420859 - 4420872 + F 91 -8.1 -4.92239 | ATCTTCGCTGCGTTT CGGGA ACGT TCCCG TTTTTAAATTTTTCC TERM 5540 4421499 - 4421485 - g 91 -5.6 -5.41143 | opp_overlap 4421485 4421486 4421496 4421497, overlap 4421487 CAGCGGTGAAAAAAA TGGGCG GCA CGCCGA TCCTTGGTATCGTGC treB 4420941 - 4422359 + | trehalose(maltose)-specific PTS system components IIBC TERM 5541 4423350 - 4423362 + G 72 -7.7 -3.87104 | opp_overlap 4423347 AGGAATGCACAACGT GGCAT GGA ATGCC TTGTTCTGGTGTAAC TERM 5542 4423953 - 4423939 - g 75 -11.4 -3.1247 | AGCCGTGAGATCCAA CCCTGG CAG CCAGGG CAAATGCGCGGCAAC treC 4422409 - 4424064 + | trehalose-6-phosphate hydrolase TERM 5543 4424245 - 4424235 - f 74 -5.4 -4.57275 | overlap 4424238 CAAAAAAAGTTAAAA CATC CTT GATG CAAAGCACTATATAT TERM 5544 4424767 - 4424740 - g 77 -6.2 -4.67234 | gap 1, opp_overlap 4424739 4424742, overlap 4424742 ATTGAACGTGAAAAA CGCGG-TCGCCTG AAC CAGGAGATCCGTG GTCTGGTCGAGCAGA nrdD 4424458 - 4426596 + | anaerobic ribonucleoside triphosphate reductase TERM 5545 4426650 - 4426619 - f 80 -10 -3.90112 | opp_overlap 4426615 4426619 4426629, overlap 4426620 4426637 TCTGCGCTAAGCAAA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACATTTGGCAACGG TERM 5546 4426619 - 4426650 + F 78 -12.2 -2.64155 | opp_overlap 4426619 4426620 4426637, overlap 4426615 4426629 TCTGCGCTAAGCAAA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACATTTGGCAACGG TERM 5547 4426649 - 4426620 - f 82 -13.5 -2.93853 | opp_overlap 4426619 4426615 4426629, overlap 4426619 4426637 CTGCGCTAAGCAAAT GCCGGATGCGGCG TAAA CGCCTTATCCGGC CTACATTTGGCAACG TERM 5548 4426684 - 4426637 - f 88 -12.2 -3.53811 | opp_overlap 4426629 4426619 4426615 4426671 4426672, overlap 4426620 4426619 4426681 CGGATGCGGCGTAAA CGCCTTATCCGGCCTACA TTTGGCAACGGC TGTAGGCCTGATAAGACG CGACAGCGTCGCATC TERM 5549 4426671 - 4426704 + F 73 -9.5 -3.34344 | opp_overlap 4426637 4426681, overlap 4426672 TTGGCAACGGCTGTA GGCCTGATAAGACGC GACA GCGTCGCATCAGGCA TTGATTACCGGATGC TERM 5550 4426672 - 4426703 + F 81 -13 -2.60392 | opp_overlap 4426637 4426681, overlap 4426671 TGGCAACGGCTGTAG GCCTGATAAGACGC GACA GCGTCGCATCAGGC ATTGATTACCGGATG TERM 5551 4426699 - 4426681 - f 79 -11 -3.30124 | opp_overlap 4426672 4426671, overlap 4426637 CTGTAGGCCTGATAA GACGCGAC AGC GTCGCATC AGGCATTGATTACCG nrdG 4426754 - 4427218 + | anaerobic ribonucleotide reductase-activating protein TERM 5552 4427255 - 4427222 - T 93 -14.7 -3.4072 | overlap 4427223 CATTTGCGATGATAA GTTCCCTGTTACCTG AGTG CAGGCAACAGGGAAA TGAGGAATTAACGAT TERM 5553 4427254 - 4427223 - T 100 -18.2 -2.64218 | overlap 4427222 ATTTGCGATGATAAG TTCCCTGTTACCTG AGTG CAGGCAACAGGGAA ATGAGGAATTAACGA cybC 4427645 - 4427301 - | soluble cytochrome B562 precursor TERM 5554 4427802 - 4427823 + r 73 -2.1 -5.14563 | overlap 4427803 GTAATTTTTTAGTTT ATAGCGCGG CAGG TCGCGCCAG TTTTTTACTGCCCGG pmbA 4429180 - 4427828 - | peptidase PmbA yjgA 4429274 - 4429825 + | hypothetical protein TERM 5555 4429848 - 4429887 + T 79 -12.8 -2.88544 | overlap 4429851 4429862 TGTTGATGTGAGTAT GGTTTGCCGGATGCGGCG TAAA CGCCTTATCCGGCAATGC TATATCAGGCTGAAG TERM 5556 4429851 - 4429884 + T 100 -17.5 -2.69468 | overlap 4429848 4429862 TGATGTGAGTATGGT TTGCCGGATGCGGCG TAAA CGCCTTATCCGGCAA TGCTATATCAGGCTG yjfG 4431281 - 4429908 - | putative ligase TERM 5557 4431512 - 4431489 - g 81 -9.6 -4.09864 | ATTTATTGTCGAAAA GCAGCACGAG TTTT CTCATGCTAC CGGTGAGCTCACTGC TERM 5558 4432259 - 4432273 + G 74 -8.6 -3.91897 | CCAGCCACCCGGACG GCAAAC TGC GTTTGC TTTATGAGTGCAACC fbp 4431457 - 4432455 + | fructose-1,6-bisphosphatase TERM 5559 4432484 - 4432513 + T 89 -9.3 -4.59109 | opp_overlap 4432485 4432486, overlap 4432486 TCCACACGGAGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5560 4432512 - 4432485 - T 81 -12.8 -3.28912 | opp_overlap 4432484 4432486, overlap 4432486 CCACACGGAGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 5561 4432486 - 4432511 + T 100 -16.3 -3.90762 | opp_overlap 4432486 4432485, overlap 4432484 CACACGGAGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 5562 4432511 - 4432486 - T 90 -16.3 -2.57026 | opp_overlap 4432484 4432486, overlap 4432485 CACACGGAGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SF4259 4433841 - 4432495 - | IS4 orf TERM 5563 4433831 - 4433856 + g 73 -9.1 -3.61398 | opp_overlap 4433831 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 5564 4433856 - 4433831 - G 100 -9.8 -5.61596 | opp_overlap 4433831 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC SF4260 4434922 - 4434050 - | inner membrane ABC transporter permease protein YjfF TERM 5565 4434628 - 4434614 - G 72 -7.8 -3.90328 | overlap 4434627 CAGAAGCCCCATAAA TGCGCC GAA GGCACA GCCCATCACCAGCAC TERM 5566 4434905 - 4434881 - G 72 -7.8 -3.97388 | overlap 4434883 ATAGCCCAGCACAAA GACGCCGATG GTGAT CATCAGCGGC AAGTTACGTTTTATC TERM 5567 4434903 - 4434883 - G 73 -9 -3.57674 | overlap 4434881 AGCCCAGCACAAAGA CGCCGATG GTGAT CATCAGCG GCAAGTTACGTTTTA ytfT 4435934 - 4434909 - | putative transport system permease protein TERM 5568 4435422 - 4435410 - G 76 -9.1 -3.71848 | CGTTGGCAGGAACAA CAGCG ATC CGCTG CCAAACCATGAGAGA TERM 5569 4435903 - 4435891 - G 70 -6.2 -4.18018 | opp_overlap 4435891 GTCGGCCAGTGAAAA CGCC TTTTT GGCG GCGTAGTGTCAGGGA ytfR 4437447 - 4435945 - | putative ATP-binding component of a transport system ytfQ 4438306 - 4437587 - | putative LACI-type transcriptional regulator TERM 5570 4438355 - 4438371 + H 71 -7.3 -4.12902 | CTGGTTTTCCTGCTT TTGCTGA CCA TCGGCAA TTTTCAACGTAATTC ppa 4438853 - 4439383 + | inorganic pyrophosphatase TERM 5571 4439753 - 4439731 - T 72 -5.5 -4.4195 | gap 1, opp_overlap 4439726 4439731 4439734, overlap 4439734 ATACATCGCATAAAA CAACGCCACC CGAA GGAGGCG-TG CTTTTATTATTACTT TERM 5572 4439731 - 4439754 + T 70 -2.2 -4.95167 | opp_overlap 4439731 4439734, overlap 4439726 4439734 ATACATCGCATAAAA CAACGCCACC CGAA GGAGGCGTGC TTTTATTATTACTTA TERM 5573 4439751 - 4439734 - T 79 -8.3 -4.32067 | opp_overlap 4439734 4439731 4439726, overlap 4439731 CATCGCATAAAACAA CGCCACC CGAA GGAGGCG TGCTTTTATTATTAC ytfP 4440104 - 4439763 - | hypothetical protein TERM 5574 4440027 - 4440041 + g 72 -11.4 -2.52834 | opp_overlap 4440026 4440025, overlap 4440026 4440030 4440039 ATCGATACTGAAATC GCCCAG TAA CTGGGC ATTGGTCATCCAGTG ytfN 4443886 - 4440107 - | hypothetical protein TERM 5575 4440157 - 4440136 - G 70 -10.9 -2.70315 | overlap 4440133 4440132 GATAGAGCAAATCCA GTGCCTGGT CTAC ACCAGACAC GGCTTCCAGATATAG TERM 5576 4441752 - 4441791 + g 79 -2.1 -5.22794 | gap 1, overlap 4441755 4441770 TGCGGCACGCACAGT TCCGCATTCGGGTTAAGC CAGCA GTGTGGCCCG-ATGCTGA TTTTTTGCTCCTTAT TERM 5577 4443276 - 4443287 + g 72 -5.8 -4.43272 | CCGAGCGGCTTTTCC TCCG GCTG CGGA TTTTCAATTTTCGGT ytfM 4445616 - 4443883 - | hypothetical protein TERM 5578 4445691 - 4445678 - H 70 -2.4 -5.06816 | ACGGCTTAACAAAAA TCCA GTAATA TGGA TTAAAAAGCAGACTA msrA 4445822 - 4446460 + | methionine sulfoxide reductase A ytfL 4446783 - 4448126 + | putative transport protein TERM 5579 4448170 - 4448137 - f 71 -7.5 -3.89614 | gap 1, opp_overlap 4448141 4448143, overlap 4448139 4448143 CGTAACCCCCAGAAA CATCA-ACGGCTCCTG AAT CAGGAGCCGTCTTATT ACTGCATAGCACTTT TERM 5580 4448168 - 4448139 - f 75 -10.1 -3.5362 | gap 1, opp_overlap 4448141 4448143, overlap 4448137 4448143 TAACCCCCAGAAACA TCA-ACGGCTCCTG AAT CAGGAGCCGTCTTA TTACTGCATAGCACT TERM 5581 4448141 - 4448165 + F 100 -14.3 -3.73647 | opp_overlap 4448139 4448137 4448143, overlap 4448143 ACCCCCAGAAACATC AACGGCTCCTG AAT CAGGAGCCGTC TTATTACTGCATAGC TERM 5582 4448163 - 4448143 - f 100 -16.9 -3.50335 | opp_overlap 4448141 4448143, overlap 4448139 4448137 CCCCAGAAACATCAA CGGCTCCTG AAT CAGGAGCCG TCTTATTACTGCATA TERM 5583 4448143 - 4448163 + F 100 -16.9 -3.44998 | opp_overlap 4448143 4448139 4448137, overlap 4448141 CCCCAGAAACATCAA CGGCTCCTG AAT CAGGAGCCG TCTTATTACTGCATA ytfJ 4448719 - 4449273 + | hypothetical protein ytfI 4450274 - 4449336 - | hypothetical protein TERM 5584 4449915 - 4449927 + g 74 -6.3 -4.51812 | opp_overlap 4449915, overlap 4449911 TTTGAAATCCATGAA TGAGT TAT ACTCA TTTATTGTTATGGGA TERM 5585 4450483 - 4450441 - R 80 -10.1 -3.86346 | gap 1, opp_overlap 4450441 4450440 4450445 TTAGGTTGGGATAAA TCAGGATGGCAGAATCAG GAAATACA CTGTTTCTGCCATC-TGA ATTTAGTAAATGGAC TERM 5586 4450445 - 4450480 + r 76 -12 -2.68279 | opp_overlap 4450441, overlap 4450441 4450440 GTTGGGATAAATCAG GATGGCAGAATCAG GAAATACA CTGTTTCTGCCATC TGAATTTAGTAAATG cysQ 4451226 - 4450486 - | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 5587 4451061 - 4451043 - G 74 -8.8 -3.86015 | overlap 4451046 GATCTTCTTCAGAAA GGACCGGA ATA TCCGGTGC CAGCGTACGTAAACC TERM 5588 4452705 - 4452694 - g 70 -3.6 -4.59773 | GTGGAGGTGGAAAAA GGCC AGTT GACC TTCCGTAATGCCGCC cpdB 4451416 - 4453359 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 5589 4453416 - 4453388 - Tf 82 -11 -3.6053 | opp_overlap 4453406 4453408 4453415, overlap 4453384 4453389 CGGCCTATAAATCAA CCGCATCCGGCA TTTAT TGGCGGATGCGA TGCTGCCGTATCTTA TERM 5590 4453415 - 4453389 - Tf 79 -12.3 -2.75997 | opp_overlap 4453406 4453408, overlap 4453388 4453384 GGCCTATAAATCAAC CGCATCCGGCA TTTAT TGGCGGATGCG ATGCTGCCGTATCTT ytfH 4453955 - 4453485 - | hypothetical protein TERM 5591 4454669 - 4454651 - gH 72 -6.6 -4.18018 | overlap 4454652 CCGCGGCACTGAAAA GCGTCGGA CTG CCCGACGG ACTGGCGGATATGCT TERM 5592 4454668 - 4454652 - gH 70 -10.1 -3.10597 | overlap 4454651 CGCGGCACTGAAAAG CGTCGGA CTG CCCGACG GACTGGCGGATATGC ytfG 4453954 - 4454814 + | putative oxidoreductase ytfF 4454923 - 4455888 + | putative transmembrane subunit ytfE 4455996 - 4456658 + | cell morphogenesis/cell wall metabolism regulator TERM 5593 4456690 - 4456666 - T 100 -16.5 -4.19817 | opp_overlap 4456687 GTGAGTGATCTAAAA GCTGGATGGCA TTG CGCCATCCAGC ATGATAATGCGGTTA cycA 4458115 - 4456703 - | D-alanine/D-serine/glycine permease SF4279 4459043 - 4458423 - | peptidyl-prolyl cis-trans isomerase TERM 5594 4458878 - 4458896 + g 79 -10.2 -3.75153 | opp_overlap 4458881, overlap 4458881 CGCGATGCACCACAT CAACCGGC ACA GCCGGATG TTTGCCTTCCAGCGC TERM 5595 4458893 - 4458881 - G 76 -10.5 -3.29947 | opp_overlap 4458878 4458881 GATGCACCACATCAA CCGGC ACA GCCGG ATGTTTGCCTTCCAG TERM 5596 4459728 - 4459698 - g 74 -7.4 -4.13014 | opp_overlap 4459689, overlap 4459699 4459708 GGCAGATGGTGAAAA TCCGCCAGAACGCC AGC GGCGTGGTGACGGG CTTAACCATTGATAC TERM 5597 4459727 - 4459699 - g 72 -10.9 -3.07487 | opp_overlap 4459689, overlap 4459698 4459708 GCAGATGGTGAAAAT CCGCCAGAACGCC AGC GGCGTGGTGACGG GCTTAACCATTGATA TERM 5598 4459775 - 4459788 + G 70 -3.7 -4.71426 | overlap 4459773 GTCCTGTTTACCCGC CAGCC GGAT GGCAG TTTTATTCGTGCGCG ytfB 4459226 - 4459807 + | hypothetical protein ytfA 4460117 - 4459791 - | hypothetical protein fabG 4460650 - 4461441 + | 3-ketoacyl-(acyl-carrier-protein) reductase insB 4462773 - 4462270 - | IS1 ORF2 SF4283 4461451 - 4462335 + | hypothetical protein SF4285 4462848 - 4463843 + | IS600 ORF2 SF4286 4464936 - 4463884 - | transport of lysine/cadaverine insA 4465111 - 4465386 + | IS1 ORF1 insB 4465413 - 4465808 + | IS1 ORF2 TERM 5599 4466158 - 4466139 - T 100 -13.6 -4.98531 | opp_overlap 4466139 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG TERM 5600 4466139 - 4466158 + T 90 -13.6 -3.31196 | opp_overlap 4466139 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG TERM 5601 4466204 - 4466220 + T 73 -10.9 -2.62616 | opp_overlap 4466203 4466201 4466198 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4466928 - 4466353 - | putative transcriptional regulator dipZ 4468662 - 4466965 - | thiol:disulfide interchange protein precursor cutA 4468976 - 4468638 - | divalent-cation tolerance protein CutA TERM 5602 4469062 - 4469083 + r 80 -12.9 -2.56164 | opp_overlap 4469063, overlap 4469061 GTCGGCGGGAAAGAA AGCGGGGCG TGAA CGCCCCGCG ATTGATCATTACAGC TERM 5603 4469082 - 4469063 - R 100 -16.4 -4.41348 | opp_overlap 4469062 4469061 TCGGCGGGAAAGAAA GCGGGGCG TGAA CGCCCCGC GATTGATCATTACAG dcuA 4470393 - 4469092 - | anaerobic C4-dicarboxylate transporter TERM 5604 4470465 - 4470484 + r 100 -13.6 -5.73978 | opp_overlap 4470465 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTTTTTATTTGTACT TERM 5605 4470484 - 4470465 - R 100 -13.6 -5.55769 | opp_overlap 4470465 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTTTTTATTTGTACT aspA 4471992 - 4470511 - | aspartate ammonia-lyase TERM 5606 4471376 - 4471388 + g 74 -7.7 -4.13282 | overlap 4471367 ACTGCGTCCTGCAGC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 5607 4471811 - 4471826 + g 71 -2.6 -4.92757 | gap 1, opp_overlap 4471811, overlap 4471806 ATACCGCGAACAAAT TCAG-GA ATA TCACTGA TTTTGTTGTTGCTGA fxsA 4472284 - 4472760 + | FxsA TERM 5608 4472769 - 4472801 + T 78 -4.8 -5.0925 | opp_overlap 4472762 4472769 GGATTAATGTCGAAA CGCCGGATTATG TGGTTATGC CATTTTCCGGCG TTTTTCGTTTTGGCA yjeH 4474032 - 4472776 - | inner membrane protein YjeH TERM 5609 4473906 - 4473894 - G 77 -6.9 -4.56314 | opp_overlap 4473899, overlap 4473895 CTAAGATAATCAAAA CGGGC CAC GCCCA CAGGCTGTTATTGCC TERM 5610 4473997 - 4474011 + g 70 -7.1 -4.10744 | opp_overlap 4473987 TAGCAGGCCAATGCC CTGGG CCAGC CCCAG TTCTTGTTTGAGTCC groES 4474308 - 4474601 + | co-chaperonin GroES TERM 5611 4475021 - 4475011 - g 74 -8.2 -3.91897 | CGTGGTATCGACAAA GCGG TTA CCGC TGCAGTTGAAGAACT groEL 4474645 - 4476291 + | chaperonin GroEL TERM 5612 4476344 - 4476321 - f 84 -8 -4.83246 | opp_overlap 4476321 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA TERM 5613 4476321 - 4476344 + F 100 -12.4 -5.50723 | opp_overlap 4476321 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA yjeI 4476396 - 4476782 + | hypothetical protein yjeJ 4477854 - 4476985 - | hypothetical protein insA 4478040 - 4478315 + | IS1 ORF1 insB 4478342 - 4478737 + | IS1 ORF2 TERM 5614 4479026 - 4479047 + T 76 -7.9 -4.30978 | ATCAGTTACTGCTGG CGTAGCTGG AGAT CCAGCGGCG TTTTGCTGGGTTCGC yjeK 4480044 - 4479016 - | hypothetical protein efp 4480086 - 4480652 + | elongation factor P TERM 5615 4480657 - 4480688 + F 90 -13 -3.65046 | overlap 4480661 GCGTGAAGTAATGCG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCAGGTCAGAG TERM 5616 4480661 - 4480684 + F 86 -14.6 -2.66106 | overlap 4480657 GAAGTAATGCGGTTG TGGTGCGGCC TGCA GGCTGCACCA TCACTTATTCAGGTC ecnA 4480704 - 4480829 + | entericidin A ecnB 4480940 - 4481086 + | entericidin B membrane lipoprotein TERM 5617 4481090 - 4481121 + F 91 -8 -5.26316 | opp_overlap 4481094, overlap 4481094 GCGCAGCAATAAGCA ATAACGGTACGACA GCAG TGTCGTGCCGTTTG TTTTTTCTGCGATCG TERM 5618 4481094 - 4481117 + F 100 -13.2 -5.13354 | opp_overlap 4481094, overlap 4481090 AGCAATAAGCAATAA CGGTACGACA GCAG TGTCGTGCCG TTTGTTTTTTCTGCG TERM 5619 4481117 - 4481094 - f 87 -11 -3.90559 | opp_overlap 4481094 4481090 AGCAATAAGCAATAA CGGTACGACA GCAG TGTCGTGCCG TTTGTTTTTTCTGCG sugE 4481112 - 4481579 + | suppresser of groEL blc 4482109 - 4481576 - | outer membrane lipoprotein Blc TERM 5620 4482187 - 4482170 - R 95 -11.3 -4.46581 | GAAAAGCGCAGAAAA GGTCCGA AAAT TCGGACC CGATGAAATTTTACT ampC 4483331 - 4482198 - | beta-lactamase TERM 5621 4483352 - 4483376 + r 93 -12.7 -3.75629 | opp_overlap 4483354, overlap 4483353 CTGGTTTCCATACAA AACGGCCCGCC ATA GGCGGGCCGGA TTTACATTGGCGATG TERM 5622 4483353 - 4483375 + r 93 -16.2 -2.85056 | opp_overlap 4483354, overlap 4483352 TGGTTTCCATACAAA ACGGCCCGCC ATA GGCGGGCCGG ATTTACATTGGCGAT TERM 5623 4483374 - 4483354 - R 100 -19.7 -4.52589 | opp_overlap 4483353 4483352 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCG GATTTACATTGGCGA frdD 4483753 - 4483394 - | fumarate reductase subunit D frdC 4484159 - 4483764 - | fumarate reductase subunit C frdB 4484904 - 4484170 - | fumarate reductase iron-sulfur subunit frdA 4486705 - 4484897 - | fumarate reductase flavoprotein subunit TERM 5624 4485708 - 4485733 + g 79 -2.6 -5.24129 | gap 1, overlap 4485710 GCTTTCGCCAGTTCG CAG-ATGAACG GCAGA CGTTCATGCAG TTTTTTCTCGCCGAG TERM 5625 4485797 - 4485769 - G 70 -7.3 -4.04206 | opp_overlap 4485770 4485772 4485793, overlap 4485772 4485774 GCAGGTCGAGATAAA CCACATCACCACG CGG CGTGGAGATGGTG TTGCCTTTACGCCAT TERM 5626 4485794 - 4485772 - G 75 -12 -3.06418 | opp_overlap 4485770 4485772 4485793, overlap 4485769 4485774 GGTCGAGATAAACCA CATCACCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 5627 4485772 - 4485794 + g 72 -12 -2.51888 | opp_overlap 4485772 4485769 4485774, overlap 4485770 4485793 GGTCGAGATAAACCA CATCACCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 5628 4487834 - 4487846 + G 70 -10.5 -2.71712 | overlap 4487833 CAAGATAACCGTAAG CGCGC GGC GCGCG GTTTGCCGCAGCACC yjeA 4487030 - 4488007 + | lysyl-tRNA synthetase TERM 5629 4488267 - 4488246 - T 79 -3 -5.34555 | opp_overlap 4488246 4488248 4488263, overlap 4488248 TCACACGATAAAAAA GATGAGTC TGATAG GACTCATA TTGATGATCTTTACT insB 4488803 - 4488408 - | IS1 ORF2 insA 4489105 - 4488830 - | IS1 ORF1 TERM 5630 4489529 - 4489543 + r 78 -5.8 -4.91084 | ATTTAGTATTGCTGT TAGTAA GCA TTACTA TTTTGTTATTAAATG TERM 5631 4490545 - 4490506 - R 100 -14.5 -3.8647 | gap 1, opp_overlap 4490514 ACTGATCATATGAAA TCCTG-CAACTCATCGTC TCTCC GGCGATGAGTTGTCAGGA AGTAATGCGTATGGA TERM 5632 4490514 - 4490536 + r 71 -9.9 -3.2963 | opp_overlap 4490506 TATGAAATCCTGCAA CTCATCGTC TCTCC GGCGATGAG TTGTCAGGAAGTAAT TERM 5633 4490602 - 4490637 + r 74 -10.6 -3.21912 | gap 1, opp_overlap 4490596 4490614 TGAAGATGATGTTAA GCTGCTAAATGA-GCCA CGT TGACATCATTTGGCAGC TTCATGCATTACAAA yjeP 4493957 - 4490646 - | hypothetical protein TERM 5634 4491152 - 4491173 + g 72 -5.7 -4.56775 | GATCGCGGATCGTTA CCGTATCGC CAAT GCGAATCGG TTTTTCGAACAGGAT psd 4494947 - 4493979 - | phosphatidylserine decarboxylase yjeQ 4496096 - 4495044 - | ribosome-associated GTPase TERM 5635 4495568 - 4495608 + g 74 -11.1 -3.19509 | overlap 4495557 4495566 4495564 4495562 4495569 TGCGGTAGATATCCA TCTGCTCGTTGACGAACGC CAT GCCTTCGTCGTCCAGCAGG TCTATCTTGTTGAGC TERM 5636 4495569 - 4495607 + g 76 -12.4 -2.51223 | overlap 4495557 4495568 4495566 4495564 4495562 GCGGTAGATATCCAT CTGCTCGTTGACGAACGC CAT GCCTTCGTCGTCCAGCAG GTCTATCTTGTTGAG yjeR 4496191 - 4496736 + | oligoribonuclease TERM 5637 4496858 - 4496838 - Tf 80 -5.5 -4.9792 | overlap 4496840 CACTTGAGATAAAAA CGCAAAAAA AAC TTTTTTGGG GGGTTGCAGAGGGAA TERM 5638 4496989 - 4496973 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5639 4497047 - 4497034 - Tf 72 -6.7 -4.28049 | TCCAAAATTTGAAAA GTGCT GCAA AGCAC AGACCACCCAATCGC TERM 5640 4497222 - 4497206 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5641 4497333 - 4497317 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5642 4497444 - 4497428 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5643 4497667 - 4497689 + TF 76 -4.9 -4.78753 | overlap 4497669 4497685 AATCAAGATTCCGTT TTGTCGAGT CGATC ACTTGACGA TTTTATTCGTCTTGA yjeS 4498886 - 4497747 - | hypothetical protein TERM 5644 4498593 - 4498579 - Gf 73 -10 -3.32844 | opp_overlap 4498578 4498577 CGGCCCAGCGCATAA CGGCTA ACA TAGCCG AGTTTGGGGTTTTTC TERM 5645 4499428 - 4499414 - gH 72 -9.2 -3.53012 | GCCTGCTGGCTGAAA CCGGCG CTA CGCCAG GCGCAGTGATCAACG yjeF 4498885 - 4500432 + | hypothetical protein yjeE 4500404 - 4500865 + | putative ATPase TERM 5646 4501208 - 4501198 - g 72 -6.8 -4.1899 | CGATCTTACCGAAAA CGGT AAA ACCG AAGCGGTGAAGCGGC amiB 4500884 - 4502221 + | N-acetylmuramoyl-l-alanine amidase II TERM 5647 4502453 - 4502426 - g 83 -5.4 -5.14563 | overlap 4502429 TGCGGTATCAAAAAA GATGAGCTGGCG CTGG CGCTGGCTCGTC ATGCCACCAGTAAAA TERM 5648 4503302 - 4503292 - g 77 -8.2 -4.09685 | opp_overlap 4503296 TGCCATCCCGGAAAA CCGC GTG GCGG CGGGGCGCAATCACT TERM 5649 4503518 - 4503482 - g 72 -4.9 -4.65895 | overlap 4503488 4503489 GCGCCGATGCAAAAA CCAAAAGCGCCGGAACC GCA GGAACCTGCACTTGCGG CGAACAGTCAGAGTT TERM 5650 4503521 - 4503488 - g 85 -7.3 -4.78661 | overlap 4503482 4503489 ATGCAAAAACCAAAA GCGCCGGAACCGCAG GAAC CTGCACTTGCGGCGA ACAGTCAGAGTTTTG TERM 5651 4503520 - 4503489 - g 78 -10.8 -3.4557 | overlap 4503482 4503488 TGCAAAAACCAAAAG CGCCGGAACCGCAG GAAC CTGCACTTGCGGCG AACAGTCAGAGTTTT TERM 5652 4503651 - 4503665 + G 71 -9.2 -3.53012 | AGGCACAATTGACGC CGGGTG AAG CGCCCG TTTGCGCCCAGCCGC TERM 5653 4503749 - 4503737 - g 74 -3.3 -4.91109 | TCGGCATTAGAAAAA GCGCA GTC TGCCC TAGCGGAATTGGGTA mutL 4502231 - 4504078 + | DNA mismatch repair protein miaA 4504071 - 4505021 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 5654 4505135 - 4505162 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4505134 4505131, overlap 4505128 AATCTTTACAAGATC CGTTCCTGAACGC ACT GCGT-CGGGAACG TGTTCCAGTTTCTAT TERM 5655 4505338 - 4505328 - g 72 -8.2 -3.78778 | overlap 4505329 TCATCACAGTAACAA CGCC GGT GGCG GTACCAGCAGTAACT hfq 4505107 - 4505415 + | RNA-binding protein Hfq TERM 5656 4506384 - 4506372 - g 71 -3.3 -4.77165 | GCGTGTACAAGAAAA CATCG AAG CGGTG AATACGGTTCTTGAA TERM 5657 4506535 - 4506499 - g 90 -9.5 -4.4768 | overlap 4506495 GACGAAGAGAACAAA CCGATCCGTGTCTG-GC TTTCC GCACAGAC-CGGAGCGG GGATACCACAGCTTT hflX 4505491 - 4506771 + | putative GTPase HflX TERM 5658 4507174 - 4507163 - g 70 -7.2 -4.03811 | opp_overlap 4507173 TATACCATTAAAGAA GCCG AACG CGGC GTGGTAACACGCTTT TERM 5659 4507869 - 4507856 - g 75 -5.3 -4.69664 | GAGACGATGGAAAAA GTGTT GGGT AACAC CCGCAAAGTGCTGGT TERM 5660 4508088 - 4508069 - g 81 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC CAAC GCGCAGCG TAACGACTACCAGCG hflK 4506857 - 4508116 + | FtsH protease regulator HflK hflC 4508119 - 4509123 + | FtsH protease regulator HflC TERM 5661 4509180 - 4509152 - f 87 -9.6 -4.19678 | gap 1, opp_overlap 4509153, overlap 4509153 GTACAGGTCAATAAA GCCACCG-CATCC TCAG GGATGTCGGTGGT TTTCTTTTTCTATAA TERM 5662 4509179 - 4509153 - f 82 -13.1 -3.11325 | gap 1, opp_overlap 4509153, overlap 4509152 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA TERM 5663 4509153 - 4509179 + F 100 -13.1 -5.38839 | gap 1, opp_overlap 4509153 4509152 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA yjeT 4509205 - 4509402 + | hypothetical protein TERM 5664 4509876 - 4509866 - g 74 -8.2 -3.86194 | overlap 4509853 4509867 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 5665 4510021 - 4509989 - g 72 -5.6 -4.56775 | opp_overlap 4509989 4510011, overlap 4510012 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4509506 - 4510804 + | adenylosuccinate synthetase TERM 5666 4511208 - 4511194 - g 74 -2.7 -5.00616 | overlap 4511195 TGTTCGTGGAAAAAA TGGCG GCATT CGCCT GGGTAAACCGGCGAG yjeB 4511009 - 4511434 + | transcriptional repressor NsrR TERM 5667 4511596 - 4511572 - g 75 -5.7 -4.71482 | gap 1, overlap 4511573 ACCAAACGTGAAAAA CCGGCCAGCC GTGATG AGCTGGC-GG TAGAACTGCACATTG TERM 5668 4513811 - 4513800 - g 70 -7.2 -4.08806 | TGAGAAAAAAACGAA GCCG AAAG CGGC GAAGAAAGACGCGAG vacB 4511473 - 4513914 + | exoribonuclease R TERM 5669 4514213 - 4514238 + G 76 -10.5 -3.36492 | gap 1, overlap 4514214 TCTGTTACCGCTGAT TCACGCCCTTGA GTC TCA-GGGCGTGG TTATCCAGTTGGCAA TERM 5670 4514214 - 4514237 + G 73 -11.8 -2.61681 | gap 1, overlap 4514213 CTGTTACCGCTGATT CACGCCCTTGA GTC TCA-GGGCGTG GTTATCCAGTTGGCA TERM 5671 4514308 - 4514278 - g 74 -6 -4.4648 | opp_overlap 4514285 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC CCGCGTGAAGCCAGG yjfH 4514094 - 4514825 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 5672 4514864 - 4514845 - f 72 -6.4 -4.3534 | opp_overlap 4514846, overlap 4514846 TCTGAATTATGAAAA GCCATCCA GATT TGGATGGT TTTTTTGGTAATGCT TERM 5673 4514846 - 4514863 + F 100 -9.9 -5.55664 | opp_overlap 4514845 4514846 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTGGTAATGC TERM 5674 4514863 - 4514846 - f 71 -9.9 -3.20722 | opp_overlap 4514846, overlap 4514845 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTGGTAATGC insA 4514926 - 4515201 + | IS1 ORF1 insB 4515228 - 4515623 + | IS1 ORF2 TERM 5675 4515828 - 4515850 + F 74 -5.5 -4.57341 | gap 1, overlap 4515830 4515841 AGGAATGTTTATGGG AACCGCC-GC GCTG GCTGGCGGTA TTTTTAACGCAGCTT TERM 5676 4515830 - 4515848 + F 74 -8.1 -3.90048 | gap 1, overlap 4515828 4515841 GAATGTTTATGGGAA CCGCC-GC GCTG GCTGGCGG TATTTTTAACGCAGC TERM 5677 4516023 - 4516034 + G 79 -2.2 -5.27779 | gap 1, overlap 4516023 AACGTTGGCGCTAAT G-GGC GGT GCCGC TTTTTTCGTATTGAA TERM 5678 4516436 - 4516426 - g 80 -5.4 -5.00616 | GGTTCTGGCAAAAAA GAGT CTT ACTC TTCAGGCGGCTTTAC yjfM 4515889 - 4516527 + | hypothetical protein TERM 5679 4516892 - 4516915 + G 74 -8.2 -3.95036 | gap 1, opp_overlap 4516883 GTACAACGCCGATAC GCCGACCTCGT TGT ATGA-GTCGGC TTATTTCCAGTGGTT TERM 5680 4517030 - 4517042 + G 82 -3.4 -5.3104 | CTTTAGTGAGCTTTA CAGT CGGGA ACTG TTTTATTTTTGCTGC yjfC 4516530 - 4517693 + | putative synthetase/amidase TERM 5681 4517762 - 4517725 - Tf 90 -14.3 -3.14132 | opp_overlap 4517729 TCTTTCTGTCATGAA TCCATGGCAGTGACCAT ACTA ATGGTGACTGCCATTGA TGGAGGGAGACACAG TERM 5682 4517729 - 4517758 + TF 86 -13.7 -3.14132 | opp_overlap 4517725 TCTGTCATGAATCCA TGGCAGTGACCAT ACTA ATGGTGACTGCCA TTGATGGAGGGAGAC TERM 5683 4518123 - 4518135 + GT 100 -10.5 -4.68724 | overlap 4518104 CCGGCGCATTTGTGG CGCGC GCG GCGCG TTTTATGTTACATGC TERM 5684 4518457 - 4518487 + GT 100 -9.7 -5.24129 | gap 1 CGATGCGCATCTGGT GCTGGCGCAGACCG CGGG CGGTCTGT-CCTGC TTTTTTGTGCCGCGC TERM 5685 4518897 - 4518887 - gT 74 -8.2 -3.9392 | opp_overlap 4518886 GCCGATGCCAAAGAA GCCC TGT GGGC GCGTTTATTTACGCC insB 4519471 - 4519076 - | IS1 ORF2 SF4340 4517759 - 4519141 + | putative carnitine operon oxidoreductase insA 4519773 - 4519498 - | IS1 ORF1 yjfN 4520598 - 4520296 - | hypothetical protein TERM 5686 4520540 - 4520582 + g 76 -3.5 -4.98531 | gap 1 GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA yjfO 4521049 - 4520720 - | hypothetical protein yjfP 4521231 - 4521980 + | esterase yjfQ 4522732 - 4521977 - | transcriptional repressor UlaR TERM 5687 4522831 - 4522790 - R 90 -13.1 -3.47762 | overlap 4522788 4522791 AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTTC TCCACGCTATCCGGTATAA ACGACAGATTACAGG TERM 5688 4522830 - 4522791 - R 86 -14.4 -2.67934 | overlap 4522790 4522788 ATAGCCAGGAAATAC TACGCCGGATAGCGCGAA CTTC TCCACGCTATCCGGTATA AACGACAGATTACAG yjfR 4523910 - 4522840 - | putative L-ascorbate 6-phosphate lactonase ulaA 4524259 - 4525656 + | ascorbate-specific PTS system enzyme IIC sgaB 4525672 - 4525977 + | L-ascorbate-specific enzyme IIB component of PTS ptxA 4525987 - 4526451 + | L-ascorbate-specific enzyme IIA component of PTS TERM 5689 4526652 - 4526618 - g 73 -9.3 -3.59979 | gap 1 GTTCGCGATCTGAAA GCGCTCTACCCGCACA AAAT CGTGCTGGCAGA-CGC CAAAATTGCCGATGC ulaD 4526465 - 4527115 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 5690 4527184 - 4527164 - g 100 -12.5 -4.7497 | GGCATCTATGAAAAA GCGCTCCCC GCC GGGGAGTGC TGGCTGGAACGCCTG sgaU 4527125 - 4527979 + | L-xylulose 5-phosphate 3-epimerase sgaE 4527979 - 4528665 + | L-ribulose-5-phosphate 4-epimerase TERM 5691 4528753 - 4528736 - f 100 -12.7 -5.40072 | CGTTTTTCAAAAAAA GCCCCCT GCGA AGGGGGC AAAGCAAACTATGGC TERM 5692 4528872 - 4528884 + F 70 -9.1 -3.46435 | overlap 4528870 4528869 TACGTGGTAGTACGT TGCGC CTT GCGCA TCTGTTTCTTCATTT rpsF 4529396 - 4529791 + | 30S ribosomal protein S6 rpsR 4530117 - 4530344 + | 30S ribosomal protein S18 rplI 4530386 - 4530835 + | 50S ribosomal protein L9 TERM 5693 4530849 - 4530891 + F 84 -8.4 -4.7254 | opp_overlap 4530837 4530861, overlap 4530856 4530861 AATTCGTTATTCAAC GAGACGTAAAAACGCCGACC ATT GGTCGGCGTTTTGCTTTCTA TTTTTCGTCAGGCAT TERM 5694 4530856 - 4530884 + F 100 -16.1 -3.33352 | opp_overlap 4530861, overlap 4530849 4530861 TATTCAACGAGACGT AAAAACGCCGACC ATT GGTCGGCGTTTTG CTTTCTATTTTTCGT TERM 5695 4530861 - 4530879 + F 100 -16 -4.68919 | opp_overlap 4530861, overlap 4530856 4530849 AACGAGACGTAAAAA CGCCGACC ATT GGTCGGCG TTTTGCTTTCTATTT TERM 5696 4530879 - 4530861 - f 100 -16 -4.72333 | opp_overlap 4530856 4530849 4530861 AACGAGACGTAAAAA CGCCGACC ATT GGTCGGCG TTTTGCTTTCTATTT SF4358 4531533 - 4531811 + | hypothetical protein SF4359 4531868 - 4532449 + | ISEhe3 orfB SF4360 4533308 - 4532490 - | IS600 ORF2 SF4361 4533646 - 4533344 - | IS600 ORF1 SF4362 4533711 - 4534031 + | hypothetical protein TERM 5697 4534071 - 4534044 - T 86 -12 -3.62522 | opp_overlap 4534043, overlap 4534046 TAACGCGGCGAATAA TACCCGGTAGCA CTGG CGCTACCGGGTC AATGTATCAGGCGAC TERM 5698 4534069 - 4534046 - T 93 -14.6 -3.38991 | opp_overlap 4534043, overlap 4534044 ACGCGGCGAATAATA CCCGGTAGCA CTGG CGCTACCGGG TCAATGTATCAGGCG SF4363 4534419 - 4534078 - | endoribonuclease SymE TERM 5699 4534589 - 4534620 + r 91 -11 -4.36914 | opp_overlap 4534597, overlap 4534593 4534597 TAAATTTTGGTGATG TGAATAAAGCGGCT ATTT AGCCGCTTTATTGG TTTTGTGAGGGCGAG TERM 5700 4534593 - 4534616 + r 100 -14 -3.75115 | opp_overlap 4534597, overlap 4534589 4534597 TTTTGGTGATGTGAA TAAAGCGGCT ATTT AGCCGCTTTA TTGGTTTTGTGAGGG TERM 5701 4534612 - 4534597 - R 87 -10.4 -4.1822 | opp_overlap 4534593 4534589 4534597 GGTGATGTGAATAAA GCGGCT ATTT AGCCGC TTTATTGGTTTTGTG TERM 5702 4534597 - 4534612 + r 93 -10.4 -4.48176 | opp_overlap 4534597, overlap 4534593 4534589 GGTGATGTGAATAAA GCGGCT ATTT AGCCGC TTTATTGGTTTTGTG SF4364 4536301 - 4534640 - | hypothetical protein TERM 5703 4534810 - 4534830 + g 82 -3.3 -5.31072 | TAATATTGTAAAAAC TGTCAGAAT TAA GTTTTGGCA TTTTTATTCTGTTCT SF4365 4537806 - 4536301 - | putative restriction modification enzyme M subunit (methylase) TERM 5704 4537205 - 4537187 - G 70 -3.7 -4.67982 | overlap 4537189 GCGCAGGCAAGAAAA CCGCCCG TACCG CAGGCCG GGTCCATAATGGATT TERM 5705 4537454 - 4537471 + g 71 -3.3 -4.87665 | overlap 4537455 CTGAACGCCTGCTTC ACCACGT AGCC GCGTGGG TTTTTATCGATAGGC TERM 5706 4537826 - 4537789 - G 85 -7 -4.7373 | overlap 4537792 4537793 GTATTCCATGAAAAA CAAGGCCTTCTGCAAC ATGATG GTTGCAGAAGGCGCAA AAGAGAGTTGTTAAG TERM 5707 4537823 - 4537792 - G 100 -13.1 -4.47707 | overlap 4537789 4537793 TTCCATGAAAAACAA GGCCTTCTGCAAC ATGATG GTTGCAGAAGGCG CAAAAGAGAGTTGTT TERM 5708 4537822 - 4537793 - G 100 -16.6 -3.27901 | overlap 4537792 4537789 TCCATGAAAAACAAG GCCTTCTGCAAC ATGATG GTTGCAGAAGGC GCAAAAGAGAGTTGT SF4366 4540269 - 4537837 - | Type I restriction enzyme EcoAI R protein (R.EcoAI) TERM 5709 4539707 - 4539728 + g 85 -7.3 -4.79174 | AGAACGCGGTTTTGC CCGTTGGAG ACGG CTTCAATGG TTTTGTTGATTGCCT insA 4540566 - 4540841 + | IS1 ORF1 SF4369 4542100 - 4541198 - | L-lactate permease insB 4540868 - 4541263 + | IS1 ORF2 TERM 5710 4541305 - 4541326 + gT 70 -5.8 -4.1822 | TAGCCTCGCTGACCA CTGGTGGC ATACGG GCAACCAG TTTATTGAGGTACGG yjiA 4542963 - 4542109 - | putative GTP-binding protein YjiA yjiX 4543279 - 4543076 - | hypothetical protein TERM 5711 4543319 - 4543302 - R 100 -14.1 -4.51812 | TCTGATAAGAACAAA GCCCCGC CGAA GCGGGGC TAAACACGGTTAGTG yjiY 4545494 - 4543329 - | putative carbon starvation protein TERM 5712 4545866 - 4545838 - R 100 -9.6 -5.2291 | gap 1, overlap 4545839 AGATCACAATAAAAA TGCCCCTTCGACG AATG CGT-GAAGGGGCT GGAGCTTAAATCGCA TERM 5713 4545865 - 4545839 - R 95 -13.1 -3.72119 | gap 1, overlap 4545838 GATCACAATAAAAAT GCCCCTTCGACG AATG CGT-GAAGGGGC TGGAGCTTAAATCGC hpaC 4546384 - 4545872 - | component C of the 4HPA-hydroxylase SF4374 4547454 - 4546402 - | 4-hydroxyphenylacetate 3-monooxygenase large chain SF4375 4547960 - 4547451 - | hypothetical protein TERM 5714 4548177 - 4548152 - R 76 -11.9 -2.62144 | overlap 4548151 GGCAAATCATAATAT TCCCCGCTAAC AAGG GCTAACGGGGA CGGAATTTTTTATGG SF4376 4548980 - 4548213 - | hypothetical protein TERM 5715 4549160 - 4549148 - R 71 -7.7 -3.87815 | opp_overlap 4549159 TCTCAGGTTGATAAA TGGTC AGC GACCA CGGAATTGTGTTGGT hpaA 4550041 - 4549151 - | putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein hpaX 4551406 - 4550051 - | putative 4-hydroxyphenylacetate permease hpaI 4552231 - 4551428 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 5716 4551522 - 4551485 - G 76 -9.1 -3.82433 | gap 1, opp_overlap 4551485 AGAACTATTACCAAA CCGTGCT-GCCAGCGC TTCGGCG GCGCGGGCGAGCAGGG TGGTGTCAACGCCGA hpaH 4553045 - 4552242 - | 2-oxo-hept-3-ene-1, 7-dioate hydratase TERM 5717 4552429 - 4552444 + g 70 -6 -4.20516 | opp_overlap 4552429, overlap 4552433 GGATGATTCAGCACA CCAGCG GCGA CGCCGG TTTCTTCAATCACGC TERM 5718 4552968 - 4552988 + g 80 -5.4 -4.88736 | gap 1, overlap 4552957 4552965 4552969 GTAATCCAGCGAGAT C-GCGCGGA TCTG TTCGCGCTG TTTTTCTGCCTGATC TERM 5719 4552969 - 4552986 + g 81 -9.1 -4.06182 | overlap 4552957 4552965 4552968 TAATCCAGCGAGATC GCGCGGA TCTG TTCGCGC TGTTTTTCTGCCTGA TERM 5720 4553059 - 4553082 + r 77 -10.2 -3.4072 | ATAGCGATATCCTGT GGCATTGCCG GATG CGGCAGCGCC TTATCATCCGGCCTG hpaF 4553493 - 4553113 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpaD 4554354 - 4553503 - | homoprotocatechuate dyoxygenase TERM 5721 4553816 - 4553797 - G 82 -9.2 -4.16842 | overlap 4553813 CTGATCGTCAATAAA GCGGTGCG ATAA CGAACCGC TGGCAAGGACCGCCA hpaE 4555822 - 4554356 - | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase hpaG 4557108 - 4555819 - | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase TERM 5722 4557133 - 4557158 + H 72 -4.9 -4.65747 | overlap 4557129 4557134 4557137 TCGGATTCGATCATC TTAATCATTAA TATG TTAATGATTAC TTTTATTCCCGATTG TERM 5723 4557632 - 4557616 - g 72 -8.7 -3.72695 | overlap 4557625 AGTGTTGCGATTAAA GCCGATC AAT GATCAGC GGAAGCTCTATATCT hpcR 4557380 - 4557826 + | regulator of the 4HPA-hydroxylase operon TERM 5724 4557845 - 4557855 + F 80 -6.8 -4.67353 | opp_overlap 4557845 TTTAGTATCTGATAA CCAG CGC CTGG TTTTTCCATGGATGG TERM 5725 4557881 - 4557892 + F 72 -3 -4.98531 | GATGGCGGGTTACAC CTTT TCAT AAAG TTTTTGCTTTCCAGG TERM 5726 4557970 - 4557984 + G 72 -7.1 -4.20883 | GTATCAAGATCGTGA CCAGC TTACT GCTGG TTTTGGCCGTTTTTG TERM 5727 4558018 - 4558028 + G 82 -3.2 -5.18357 | TTTTACAACTGACAT CAGG CGG TCTG TTTTTTAATGCCTTA TERM 5728 4558295 - 4558256 - g 91 -5.6 -5.42862 | gap 1, opp_overlap 4558290, overlap 4558272 4558273 ACAGGCGGAAAAAAA CTG-GGCGGATTACGAAGC GTT GCCGCGTGACCCGCGTCAG AGCACCGCCGCAGCG TERM 5729 4559044 - 4559026 - g 70 -5.2 -4.37886 | opp_overlap 4559027, overlap 4559027 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATTGACGGCATTAC tsr 4557945 - 4559609 + | methyl-accepting chemotaxis protein I, serine sensor receptor TERM 5730 4559649 - 4559622 - T 100 -12.2 -4.8543 | gap 1 TAATCGCCATAAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAGGGAGTTTAATCT yjiZ 4561019 - 4559658 - | putative transport protein yjjM 4562040 - 4561234 - | hypothetical protein TERM 5731 4561875 - 4561885 + g 70 -4 -4.69656 | TGAAAAAAGCCTGCT CAAA CAC TTTG TTTTGTTCACTCATT TERM 5732 4563337 - 4563363 + r 100 -5.8 -6.32017 | opp_overlap 4563328 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTTGTTTCTT TERM 5733 4563437 - 4563403 - R 100 -15.8 -3.33261 | TTGTAAGCCGGAGAA GGCGTGTAGGTCGCAC CCT ATGCGACCTACACATC AGTCAGGAATTACCC mdoB 4565738 - 4563447 - | phosphoglycerol transferase I TERM 5734 4564734 - 4564720 - G 72 -5.7 -4.52589 | GTGCGCGAGATAAAA CCATC CGGGT GATGG GTATCGACTGTCAGG yjjA 4566489 - 4565992 - | hypothetical protein dnaC 4567272 - 4566535 - | DNA replication protein DnaC TERM 5735 4567150 - 4567164 + g 72 -7 -4.15703 | ACGTTCGAGAGCGGC GGAGCG GAT CGCCCC TTGTTCTTTCTGCCA dnaT 4567814 - 4567275 - | primosomal protein I TERM 5736 4567371 - 4567385 + g 77 -2.7 -5.07486 | GGCACGACCGATTTG CAGGC TGCGC GCCAG TTTTTGTTGCCACTG TERM 5737 4567904 - 4567869 - R 83 -13.4 -3.26947 | opp_overlap 4567871 4567873 4567903 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTAAGCGAGGCAAT TERM 5738 4567871 - 4567902 + r 73 -10.9 -2.70932 | opp_overlap 4567869, overlap 4567873 ACTTTTATAGTAACA CACGGAGGAGAGG AGGCTG TCTCTCATCCGTG TGCTTAAGCGAGGCA yjjB 4568247 - 4567921 - | hypothetical protein yjjP 4569218 - 4568385 - | putative structural protein TERM 5739 4569115 - 4569105 - G 70 -5.4 -4.43397 | TTGCAAAAGAAATAA TCCA CAC TGGA TACAAAGCCGCGTTA TERM 5740 4569134 - 4569122 - G 70 -6.9 -4.05747 | CACACTGGATACAAA GCCGC GTT ACGGC TCGCTGTTGCTCAGT insA 4569779 - 4570054 + | IS1 ORF1 insB 4570081 - 4570476 + | IS1 ORF2 TERM 5741 4570924 - 4570906 - g 86 -3.9 -5.41143 | gap 1 CAGCGCCCAAAAAAA CAGTGCGA TGCG TCG-ACTG GCAATTCACAGCAAC yjjQ 4570478 - 4571062 + | putative regulator bglJ 4571074 - 4571697 + | DNA-binding transcriptional activator BglJ fhuF 4572523 - 4571735 - | ferric iron reductase involved in ferric hydroximate transport TERM 5742 4572053 - 4572073 + g 73 -11.9 -2.80922 | overlap 4572051 4572049 4572055 GCTGATTAACGTTTC CATTCGCTG CTG CGGCGAATG TGGTGTTGCGTTTTT SF4401 4572553 - 4572900 + | hypothetical protein rsmC 4574572 - 4573541 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 5743 4574917 - 4574901 - gH 79 -2.2 -5.26316 | overlap 4574902 TGACGCCAGAAAAAA TCGCGA TGCTG CCGCAA GGCAGTCGCTGCAAC holD 4574675 - 4575088 + | DNA polymerase III subunit psi rimI 4575057 - 4575503 + | ribosomal-protein-alanine N-acetyltransferase yjjG 4575518 - 4576195 + | nucleotidase prfC 4576286 - 4577875 + | peptide chain release factor 3 TERM 5744 4577886 - 4577911 + F 86 -14.7 -2.68338 | overlap 4577884 4577883 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTCCCTTCCT osmY 4578268 - 4578873 + | periplasmic protein SF4408 4578960 - 4579151 + | hypothetical protein TERM 5745 4579201 - 4579183 - f 100 -14.6 -3.67989 | opp_overlap 4579183 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 5746 4579183 - 4579201 + F 100 -14.6 -4.28049 | opp_overlap 4579183 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 5747 4579640 - 4579650 + G 74 -8.2 -3.90744 | opp_overlap 4579638 CGTTGCAAATGGATA CCGC CGC GCGG TTGTTTGACAGCGGC yjjU 4579273 - 4580346 + | hypothetical protein yjjV 4580487 - 4581125 + | hypothetical protein TERM 5748 4581299 - 4581267 - T 76 -12 -2.57344 | opp_overlap 4581233 4581232 4581276, overlap 4581233 4581266 CAGTTGGCGCACAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAAGTCTGTGCT yjjW 4582202 - 4581339 - | putative activating enzyme TERM 5749 4582149 - 4582125 - GT 78 -6.4 -4.57569 | gap 1, overlap 4582127 GCAGCCCTGCAAAAA CAGAGCCAGAC GACT GCCTGGCCC-G TCAACGCAGGAGAAG TERM 5750 4582148 - 4582127 - GT 81 -10.1 -3.90316 | overlap 4582125 AGCCCTGCAAAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA yjjI 4583715 - 4582174 - | hypothetical protein TERM 5751 4584582 - 4584562 - g 88 -5.3 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCGGCGG GCGGCGTGCGTACTG deoC 4583973 - 4584752 + | deoxyribose-phosphate aldolase TERM 5752 4585333 - 4585375 + G 72 -8.5 -3.85698 | gap 1, overlap 4585322 AAGACGTCGGCGTGG CGATTATCGGTCAGA-CCAG TTCA CTGGCTCCGGCTGATAAACG TTTCTACGCGACCCG deoA 4584879 - 4586201 + | thymidine phosphorylase deoB 4586253 - 4587476 + | phosphopentomutase TERM 5753 4587485 - 4587504 + F 93 -10.7 -4.38927 | GTTCTGATGGATTTG GGCGGAG CGTTGA CTCCGCC TTTGTTATGTCACAA deoD 4587533 - 4588252 + | purine nucleoside phosphorylase TERM 5754 4588286 - 4588309 + T 100 -12.4 -4.87037 | CGATTGTCGTGTTAA GCCGGAGTGG GGGA CTGCTCCGGC TTTTTAGTATCTATT SF4417 4588676 - 4588413 - | hypothetical protein smp 4590395 - 4589751 - | hypothetical protein serB 4590501 - 4591469 + | phosphoserine phosphatase TERM 5755 4592307 - 4592294 - g 80 -5.2 -4.88067 | ACGCAGCCATAAAAA CCGC TTCGGC GCGG TGAATGAGCTGGGCG sms 4591518 - 4592900 + | DNA repair protein RadA TERM 5756 4593069 - 4593045 - g 72 -5 -4.67641 | gap 1, overlap 4593046 ATGCCAAAATTAAAA GCC-CCAGC GCGCAAAA GCTGGAGGC ATTGCACCGTTTTTT TERM 5757 4593823 - 4593838 + G 70 -6.1 -4.15222 | opp_overlap 4593823 4593821 4593824 TTTTGCAGTGAAATA CGCCA ATAAAG TGGCG TTTATTGACACCGAT nadR 4592921 - 4594153 + | nicotinamide-nucleotide adenylyltransferase TERM 5758 4594277 - 4594256 - T 72 -2.9 -5.03145 | gap 1, overlap 4594244 4594258 CAAGGTTTGAAAAAA CCTGCACGGG TGA CCCGC-CACG AAATTGAGGATGCTA TERM 5759 4594343 - 4594387 + T 73 -7.8 -4.11371 | opp_overlap 4594315 4594314, overlap 4594315 ATCCGGCATTCGGTG CTCAATGCCTGATGCGACGC TTACC GCGTCTTATCAGGCCTACAG TTTTACAACGTATTG TERM 5760 4594420 - 4594451 + T 83 -10 -4.15508 | opp_overlap 4594430, overlap 4594421 ATTGCTGGTTTTGTA GGCCGGATAAGGCG TTCG CGCCGCATCCGGCA TTTTACGCATTACTT TERM 5761 4594421 - 4594450 + T 82 -13.5 -3.08581 | opp_overlap 4594430, overlap 4594420 TTGCTGGTTTTGTAG GCCGGATAAGGCG TTCG CGCCGCATCCGGC ATTTTACGCATTACT yjjK 4596128 - 4594461 - | putative ABC transporter ATP-binding protein TERM 5762 4594511 - 4594523 + g 90 -4.7 -5.36965 | overlap 4594502 GCTCCAGCGCGTCTG CGCCC AGC GTGCG TTTTTTGTACTCTTC slt 4596339 - 4598276 + | lytic murein transglycosylase TERM 5763 4598408 - 4598427 + G 72 -6.4 -4.3898 | opp_overlap 4598407 4598408 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 4598366 - 4598692 + | Trp operon repressor TERM 5764 4599131 - 4599146 + F 72 -8.2 -3.76224 | TTTGCTACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA gpmB 4599349 - 4599996 + | phosphoglycerate mutase rob 4600862 - 4599993 - | right origin-binding protein TERM 5765 4601519 - 4601507 - g 74 -6.2 -4.56775 | opp_overlap 4601506 4601507 AGGTTCGCCGAAAAA CGCG ATTAG CGCG GTTCCTGTCATGCCG creA 4601073 - 4601546 + | hypothetical protein creB 4601559 - 4602248 + | DNA-binding response regulator CreB creC 4602248 - 4603672 + | sensory histidine kinase CreC TERM 5766 4604404 - 4604418 + G 77 -2.8 -5.13521 | opp_overlap 4604404 GACCTTAACCAGCAA CTGG CCGCATC CCAG TTTTTTAGGTGATTT creD 4603730 - 4605082 + | hypothetical protein TERM 5767 4605122 - 4605093 - T 100 -13.7 -4.64144 | opp_overlap 4605099, overlap 4605099 AATAAGGTTGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTT TGACGGTGGTAAAGC TERM 5768 4605099 - 4605116 + T 100 -12.7 -5.42259 | opp_overlap 4605093 4605099 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTGACGGTGG TERM 5769 4605116 - 4605099 - T 100 -12.7 -5.61881 | opp_overlap 4605099, overlap 4605093 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTGACGGTGG arcA 4605857 - 4605141 - | two-component response regulator TERM 5770 4605366 - 4605378 + g 71 -9.1 -3.44051 | opp_overlap 4605353 CATGGCGCGGAACTC GCTGC GCG GCAGC TTGTACTGCTCGCCA lasT 4606493 - 4607179 + | putative RNA methyltransferase SEQUENCE gi|31983523|ref|NC_004851.1| Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence (length 221618) CP0001 493 - 191 - | IS2 ORF2 TERM 1 929 - 913 - gH 74 -11.5 -2.79183 | opp_overlap 913 TGCACTGGTATCAGA CCCGGGG CTT CCCCGGA TGATCTCCACGGTAC CP0002 485 - 949 + | putative resolvase TERM 2 1575 - 1549 - g 72 -5.3 -4.57275 | opp_overlap 1555, overlap 1555 TAAAAAAAGCGAAAA TAAAAACAGTA AACGA TACTGATTTTA AAGAGTATAATAAGG TERM 3 1569 - 1555 - g 100 -4.3 -5.49568 | opp_overlap 1555, overlap 1549 AAGCGAAAATAAAAA CAGTA AACGA TACTG ATTTTAAAGAGTATA ospB 1176 - 2042 + | OspB, protein secreted by the Mxi-Spa secretion machinery, function unknown phoN2/apy 2371 - 3111 + | PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolase ospC4 4745 - 3471 - | OspC4 TERM 4 3557 - 3570 + g 70 -5.3 -4.32649 | opp_overlap 3557 TTGCATTGTCAAGCA TAGTG TCCC CACTA TTTGCTTTTTGAAAT TERM 5 3685 - 3696 + g 77 -3 -5.1417 | opp_overlap 3685 ACATCATACAGATTA CAAT ATCT ATTG TTTTTCATTTTCTCC CP0006 5665 - 5264 - | putative protein encoded within IS CP0007 6095 - 5745 - | IS600 ORF2 CP0008 6925 - 6107 - | IS600 ORF2 TERM 6 6962 - 7004 + r 91 -2.1 -5.92337 | gap 1, overlap 6966 TCGCCATTGTTCGAT TAAC-GCGTATTTTTCAGCG ACTC CTGTGCAAAATACGCTGTTG TTTTTTTTAATATAT ospD2 9144 - 7435 - | hypothetical protein TERM 7 7729 - 7747 + g 84 -3.8 -5.28778 | AAATGCCATAAAAAG TCCTGATG TAC CGTTGGGA TTTTTTATCCATAAT TERM 8 9219 - 9202 - R 72 -5.5 -4.44797 | opp_overlap 9203, overlap 9203 TTACTAATAGTAAAA GCCTCCT TACA AGGAGGT AGCTTATTCAGAATG ospF 10295 - 9576 - | OspF CP0011 10794 - 10420 - | hypothetical protein CP0012 10997 - 10620 - | hypothetical protein CP0013 11015 - 11218 + | putative IS1 ORF CP0014 11905 - 11327 - | hypothetical protein CP0015 13227 - 12871 - | IS91 orf CP0016 13412 - 13227 - | putative IS91 ORF2 TERM 9 13852 - 13842 - R 76 -2.4 -5.40072 | CCGGTGGTAAAAAAA CGTC CCC GGCG GCCTTAATGCCAGTC TERM 10 13859 - 13888 + r 89 -9.3 -4.59109 | overlap 13861 TCCCCGGCGGCCTTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 11 13861 - 13886 + r 100 -16.3 -3.90762 | overlap 13859 CCCGGCGGCCTTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG CP0017 15213 - 13870 - | IS4 orf TERM 12 15235 - 15203 - G 78 -7.8 -4.4017 | opp_overlap 15206 CCAATGTGCATAAAA GAATCCGGCAAC TGAGTGAGC GTTTCCGGATTC TTACACAGCCACTGG TERM 13 15522 - 15504 - g 71 -3.1 -4.77567 | gap 1, overlap 15505 15506 AGCCGGATAATAAAA TCCCG-GC TCCG GCACAGGA ACCAGAGCAGATAAA CP0018 15326 - 15661 + | putative protein encoded within IS CP0019 15661 - 16008 + | ISSfl4 ORF2 TERM 14 16069 - 16054 - g 72 -10.4 -3.40522 | opp_overlap 16053 ACTTGCTCATGAGAA TGCCCG CCTG CGGGCA CTGTTGCAGACGCAA CP0020 16028 - 17335 + | ISSfl4 ORF3 CP0021 18104 - 18310 + | putative transposase TERM 15 19006 - 18996 - g 71 -2.6 -4.95957 | TAAAGGAATGAAAAA TAAT ATC ATTA ACGTGACAAATACCG ospD1 18898 - 19575 + | OspD1, secreted by the Mxi-Spa secretion machinery, function unknown CP0023 20087 - 20401 + | hypothetical protein TERM 16 20454 - 20485 + F 76 -8.2 -4.14472 | gap 1, opp_overlap 20453 20457 20459 20460, overlap 20458 20459 20480 CTTCATAACTACAAC TAACAGGGCATCATT ATG AATGATGCCG-GTTA TTTTACCGCTGTTGG TERM 17 20481 - 20459 - f 70 -9.2 -3.31854 | opp_overlap 20458 20454 20459 20480, overlap 20457 20453 20460 TAACTACAACTAACA GGGCATCATT ATG AATGATGCCG GTTATTTTACCGCTG TERM 18 20480 - 20460 - f 78 -12.7 -2.58389 | opp_overlap 20459 20458 20454, overlap 20459 20457 20453 AACTACAACTAACAG GGCATCATT ATG AATGATGCC GGTTATTTTACCGCT ipgB2 20683 - 21249 + | hypothetical protein TERM 19 21645 - 21669 + F 90 -15.7 -2.71011 | CTGCGAGTCGAGTCA GCCGGAGAGAG TTT CACTCTCCGGC TGCTTACGGAACCGT CP0025 21746 - 22330 + | IS3 ORF2 TERM 20 23094 - 23114 + TF 100 -15.5 -3.46848 | overlap 23084 TCCAGGGGGTAATCT GCTCTCCTG ATT CAGGAGAGC TTATGGTCACTTTTG TERM 21 23166 - 23151 - gT 70 -4.6 -4.56914 | overlap 23152 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC CP0028 25043 - 23820 - | ISSfl3 ORF CP0026 23117 - 23899 + | IS100 ORF1 TERM 22 24799 - 24836 + gF 74 -7.8 -4.03645 | gap 1, opp_overlap 24796, overlap 24802 24827 ATCATTGGAATATCG CG-ATGGAGCGCCTCAT TACCC ATGAGGCGATCAATACG TTTGATCTTATTCTT CP0027 25018 - 25449 + | IS100 ORF1 TERM 23 25530 - 25516 - g 80 -11.4 -3.3506 | overlap 25507 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG CP0029 25446 - 26228 + | transposase/IS protein CP0030 26244 - 26633 + | iso-IS1 ORF2 TERM 24 26888 - 26868 - f 72 -8.3 -3.66784 | opp_overlap 26869 26872 GCATTTTTAATATAA GCATGTACA ATA TGTACTTGC ATGCATTACCCTGCT TERM 25 26899 - 26910 + F 100 -5.8 -5.9873 | overlap 26890 CTTGCATGCATTACC CTGC TAAT GCAG TTTTTTTTGTAATAA TERM 26 27657 - 27642 - g 81 -6.1 -4.80453 | TTAGGACAAAACAAA CACGC GATATT GCGTG AGAATATTATTGATA parA 26955 - 28154 + | plasmid segregation protein parB 28154 - 29134 + | plasmid segregation protein CP0034 29521 - 29339 - | hypothetical protein CP0033 29516 - 29875 + | putative transposase TERM 27 30557 - 30582 + FH 71 -6.9 -4.13014 | gap 1, opp_overlap 30557 GTCATATCCGAGAAA GGTGAAAC-TCG TTG CGACGTTTCTCC TTTTAAACGTGTCAA CP0037 31156 - 31551 + | hypothetical protein CP0038 31392 - 31811 + | hypothetical protein CP0039 32752 - 32084 - | IS629 ORF2 TERM 28 32651 - 32663 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA CP0040 33293 - 32967 - | IS629 ORF1 CP0041 33706 - 33299 - | IS150 ORF B CP0042 33762 - 33950 + | IS1294 transposase TERM 29 34212 - 34202 - g 79 -4.6 -5.00616 | overlap 34203 34204 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 30 34747 - 34733 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 31 34843 - 34831 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG CP0043 33960 - 35159 + | IS1294 transposase CP0044 36086 - 35565 - | IS150 ORF1(ORF A) TERM 32 36151 - 36137 - gR 82 -11.4 -3.54475 | GGGTGCAGTACATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG virF 37237 - 36449 - | transcriptional activator VirF CP0045 36124 - 36507 + | IS100 ORF2 TERM 33 36900 - 36924 + gF 100 -2.7 -5.95539 | opp_overlap 36901 36902, overlap 36902 36903 AACAAATCGATAGAA ACCTCCTCCTC AGA GAGGAGGAATA TTTTTTTGTTTAACC TERM 34 36920 - 36901 - Gf 83 -10 -4.11897 | opp_overlap 36900 36902 36903, overlap 36902 ACAAATCGATAGAAA CCTCCTCC TCAG AGAGGAGG AATATTTTTTTGTTT TERM 35 36922 - 36902 - Gf 78 -11.9 -3.06054 | opp_overlap 36900 36902 36903, overlap 36901 CAAATCGATAGAAAC CTCCTCCTC AGA GAGGAGGAA TATTTTTTTGTTTAA TERM 36 36902 - 36922 + gF 95 -9.7 -4.61687 | opp_overlap 36901 36902, overlap 36900 36903 CAAATCGATAGAAAC CTCCTCCTC AGA GAGGAGGAA TATTTTTTTGTTTAA TERM 37 36903 - 36921 + gF 89 -13.2 -3.34572 | opp_overlap 36901 36902, overlap 36902 36900 AAATCGATAGAAACC TCCTCCTC AGA GAGGAGGA ATATTTTTTTGTTTA CP0047 37780 - 38067 + | IS2 ORF2 TERM 38 38223 - 38213 - f 75 -2.6 -5.1925 | overlap 38205 CTATAATGTAAAAAA TAAA TTC TTTA CTAAAATATAACATA ospE2 38249 - 38515 + | OspE2 CP0050 38824 - 38612 - | putative IS1 encoded protein insA 38753 - 38980 + | IS1 ORF1 insB 39007 - 39402 + | IS1 ORF2 TERM 39 40697 - 40722 + F 71 -3.3 -4.74518 | gap 1, opp_overlap 40677, overlap 40683 40698 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT ipaH2.5 41197 - 42888 + | invasion plasmid antigen CP0055 42940 - 43266 + | IS629 ORF1 TERM 40 43582 - 43570 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC CP0056 43481 - 44149 + | IS629 ORF2 CP0057 44377 - 44189 - | IS600 ORF2 CP0058 44715 - 44413 - | IS600 ORF1 CP0059 45265 - 44783 - | hypothetical protein CP0060 45558 - 45256 - | hypothetical protein CP0060a 45830 - 46102 + | hypothetical protein TERM 41 46344 - 46334 - g 79 -4.6 -5.00616 | overlap 46335 46336 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 42 46879 - 46865 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 43 46975 - 46963 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG CP0061 46083 - 47291 + | IS1294 transposase CP0062 47361 - 47591 + | ISSfl1 ORF2 TERM 44 47708 - 47698 - T 85 -5.4 -5.29716 | TCAATATAACAAAAA TGAC AAC GTCA GATTCAGGGCACAAC ospC2 49194 - 47740 - | hypothetical protein TERM 45 47832 - 47845 + g 70 -5.3 -4.32649 | opp_overlap 47832 TTGCATTGTCAAGCA TAGTG TCCC CACTA TTTGCTTTTTGAAAT TERM 46 48568 - 48581 + g 71 -2.4 -4.93877 | opp_overlap 48568 ATTAGCACCAAAATC CACA GTATGA TGTG TTTTATTTAGTGGGA CP0064 49708 - 49511 - | putative IS1 encoded protein insB 49783 - 50241 + | IS1 ORF2 CP0066 50267 - 50593 + | IS629 ORF1 TERM 47 50909 - 50897 - gf 72 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC CP0067 50808 - 51476 + | IS629 ORF2 CP0068 51442 - 51930 + | putative protein encoded within IS TERM 48 51959 - 51928 - f 71 -7.5 -3.91897 | gap 2, overlap 51931 GTTCTCACCGATAAA TAAGCGTCAATACGG CCTT CCGT-T-GACGCTTA CAGAACTCCTGTGGC TERM 49 52057 - 52091 + G 82 -13 -2.87132 | opp_overlap 52048 52045 52072, overlap 52047 ATACGACTTCATTCA GTTGCCGGAACTGA ATGGAGC TCAGTTCCAGCAAC TCTGTGAAACGACAG CP0069 51950 - 52576 + | IS21 ORF2 TERM 50 52733 - 52714 - T 100 -11.4 -4.82901 | GTTCTTTCAGAAAAA GGCCTGCC GAAT GGCAGACC TATCCCATTCGTCAG sepA 56839 - 52745 - | extracellular serine protease SepA CP0071 57241 - 57429 + | IS1294 transposase TERM 51 57691 - 57681 - g 79 -4.6 -5.00616 | overlap 57682 57683 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 52 58226 - 58212 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 53 58322 - 58310 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG CP0072 57439 - 58638 + | IS1294 transposase TERM 54 59248 - 59229 - g 78 -8.6 -4.25104 | opp_overlap 59245, overlap 59245 GTTTTGGCACCAAAA TCCATCTG GCAA CAGACGGA AGTGGCCTCCCGTTA CP0073 58935 - 59264 + | ISSfl1 ORF1 CP0074 59270 - 59659 + | ISSfl1 ORF2 TERM 55 60759 - 60740 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 60722 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC CP0075 59774 - 60805 + | IS630 orf CP0076 60987 - 61271 + | iso-IS1 ORF1 CP0077 61397 - 61579 + | iso-IS1 ORF2 TERM 56 62342 - 62324 - g 76 -7.4 -4.21933 | overlap 62313 TGAATGGGAAAAGAA CTCTTCTC CCG GGGAAGAG CGAGGCATTGCTTTT TERM 57 62857 - 62869 + G 70 -4.1 -4.62471 | opp_overlap 62857 TTAATCAGATAACCA CTCTT CCG GAGAG TTTTTCACAATTAGA ipaH7.8 62214 - 63911 + | invasion plasmid antigen ipaH4.5 64339 - 66063 + | invasion plasmid antigen CP0080 66115 - 66441 + | IS629 ORF1 TERM 58 66757 - 66745 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC CP0081 66656 - 67369 + | IS629 ORF2 TERM 59 68145 - 68131 - f 77 -7.2 -4.55093 | CGATACAAGAATAAA TAGTAG TAA CTACTA TAGCTGCAAATAATG ipgH 68288 - 69691 + | invasion plasmid gene product TERM 60 69888 - 69875 - gf 73 -3.9 -4.82901 | TTTCCGGCAGAAAAA TTATG ACGG CATAA TGGATGCTGAAACCG CP0083 69660 - 69950 + | hypothetical protein TERM 61 70030 - 70009 - f 82 -13.1 -2.87132 | opp_overlap 70009 70013, overlap 70013 GCTGTCTCTTATACA CAAATCCCC ACCC GGGGATTTG TGATGTCAGATGTCC TERM 62 70009 - 70030 + F 81 -13.1 -2.64243 | opp_overlap 70009 70013, overlap 70013 GCTGTCTCTTATACA CAAATCCCC ACCC GGGGATTTG TGATGTCAGATGTCC TERM 63 70013 - 70026 + F 76 -8.1 -4.01888 | opp_overlap 70009 70013, overlap 70009 TCTCTTATACACAAA TCCCC ACCC GGGGA TTTGTGATGTCAGAT TERM 64 70026 - 70013 - f 76 -8.1 -4.12532 | opp_overlap 70013 70009, overlap 70009 TCTCTTATACACAAA TCCCC ACCC GGGGA TTTGTGATGTCAGAT CP0084 70195 - 71403 + | iso-IS10R ORF CP0085 71573 - 71382 - | IS100 ORF2 CP0086 72117 - 71614 - | putative protein encoded within IS CP0087 72881 - 72090 - | IS629 ORF2 TERM 65 72780 - 72792 + gr 72 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA CP0088 73422 - 73096 - | IS629 ORF1 TERM 66 73638 - 73624 - H 79 -11.4 -3.34344 | CTAGGGGGTAATTAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG CP0089 73674 - 74336 + | transposase/IS protein CP0164 74978 - 74712 - | IS1294 transposase CP0090 74709 - 75071 + | IS1294 transposase CP0091 76258 - 75050 - | iso-IS10R ORF CP0092 77257 - 76328 - | IS1294 transposase TERM 67 76461 - 76475 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 68 76996 - 77006 + g 79 -4.6 -5.00616 | overlap 76991 76990 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC ospD3 79610 - 77913 - | hypothetical protein ospC1 81351 - 79939 - | OspC1, secreted by the Mxi-Spa secretion machinery, function unknown TERM 69 80872 - 80882 + g 70 -4 -4.68384 | TTTTGTGCATATTCC TTCA GAC TGAA TTTTATTGAATGACT CP0095 82105 - 81806 - | ISSfl4 ORF3 CP0097 82504 - 82115 - | hypothetical protein CP0096 82466 - 82654 + | putative IS91 ORF2 TERM 70 82644 - 82630 - TR 73 -10 -3.44284 | opp_overlap 82630 82629, overlap 82628 TTTTGACGAAGAAGA CGCAGA AGT TCTGCG CTTTGATTGAACCGC CP0098 83080 - 82691 - | ISSfl1 ORF2 TERM 71 83102 - 83121 + r 79 -8.6 -4.25104 | opp_overlap 83090, overlap 83090 TAACGGGAGGCCACT TCCGTCTG TTGC CAGATGGA TTTTGGTGCCAAAAC CP0099 83625 - 83086 - | ISSfl1 ORF1 CP0100 84118 - 83645 - | hypothetical protein TERM 72 83790 - 83801 + g 75 -4.4 -4.83243 | CGTAATTTCCTGATA GCTT CTGT AAGC TTTATTTTATGTACA TERM 73 84532 - 84507 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 84515, overlap 84508 84522 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 74 85512 - 85540 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA CP0101 84369 - 85565 + | ISSfl2 ORF CP0102 85979 - 85560 - | hypothetical protein TERM 75 85981 - 85991 + r 76 -4 -4.93968 | ATCTGTTTTTTCATA TCAA AGC TTGA TTTTTACTTATACAT CP0105 87915 - 87010 - | insertion element IS2 transposase InsD CP0106 88283 - 87873 - | insertion sequence 2 OrfA protein CP0107 89171 - 88353 - | IS600 ORF2 CP0108 89509 - 89207 - | IS600 ORF1 TERM 76 89927 - 89907 - R 89 -11.1 -4.11216 | opp_overlap 89907 89908, overlap 89908 GGGGCATTCTGAAAA GCCACCTCC TCA GGAGGTGGT CTTTTACTGTGCACA TERM 77 89907 - 89928 + r 91 -10.9 -4.34402 | gap 1, opp_overlap 89907 89908, overlap 89908 GGGGCATTCTGAAAA G-CCACCTCC TCA GGAGGTGGTC TTTTACTGTGCACAG TERM 78 89926 - 89908 - R 88 -14.6 -3.06515 | opp_overlap 89907 89908, overlap 89907 GGGCATTCTGAAAAG CCACCTCC TCA GGAGGTGG TCTTTTACTGTGCAC TERM 79 89908 - 89926 + r 100 -14.6 -3.77806 | opp_overlap 89908 89907, overlap 89907 GGGCATTCTGAAAAG CCACCTCC TCA GGAGGTGG TCTTTTACTGTGCAC TERM 80 89974 - 89949 - R 100 -13.4 -4.96848 | opp_overlap 89949 CTGTGCACAGAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 81 89949 - 89974 + r 90 -13.4 -3.61398 | opp_overlap 89949 CTGTGCACAGAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 82 90026 - 90041 + r 72 -9 -3.53563 | AACTGATCGGCATTA CTCCCT ATTG AGGGAG TTTAAGAAACAATGT CP0109 90515 - 90030 - | hypothetical protein CP0110 90787 - 90503 - | hypothetical protein TERM 83 90855 - 90870 + H 83 -10.4 -3.74077 | opp_overlap 90844 90855 GTAACAGATTACAGA TGCCGC GTCA GCGGCA TTTACCTCTGTGGAC TERM 84 90870 - 90855 - H 73 -10.4 -3.01003 | opp_overlap 90855, overlap 90844 GTAACAGATTACAGA TGCCGC GTCA GCGGCA TTTACCTCTGTGGAC CP0111 91689 - 91853 + | hypothetical protein CP0112 93708 - 92107 - | ISSfl4 ORF3 TERM 85 93455 - 93472 + g 82 -9.1 -4.19238 | overlap 93443 TCTTCCAGAAGATTT CTGGCTG TGTT CAGCCGG TTTTCCAGTTCCGAC TERM 86 93477 - 93514 + g 70 -6.2 -4.1585 | overlap 93478 93482 TGTTCAGCCGGTTTT CCAGTTCCGACAGTCG TTTTTC TGCCTGTCGGATCTGA TTTTCAAGCTTATGA CP0113 94055 - 93705 - | ISSfl4 ORF2 CP0114 94726 - 94052 - | ISSfl4 ORF1 TERM 87 94390 - 94378 - G 73 -9.1 -3.62046 | opp_overlap 94370 CGATCCGGGCAACAA CAGCC CCA GGCTG TAATGCCTGCTTAGC TERM 88 94730 - 94757 + H 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG TERM 89 95921 - 95908 - g 71 -2.4 -4.93877 | opp_overlap 95908 TCCCACTAAATAAAA CACA TCATAC TGTG GATTTTGGTGCTAAT TERM 90 96529 - 96518 - g 77 -3 -5.1417 | opp_overlap 96518 GGAGAAAATGAAAAA CAAT AGAT ATTG TAATCTGTATGATGT TERM 91 96657 - 96644 - g 70 -5.3 -4.32649 | opp_overlap 96644 ATTTCAAAAAGTAAA TAGTG GGGA CACTA TGCTTGACAATGCAA ospC3 95295 - 96749 + | OspC3 CP0116 97087 - 97389 + | IS600 ORF1 CP0117 97417 - 98151 + | IS600 ORF2 CP0118 98573 - 98995 + | IS150 ORF B TERM 92 99687 - 99669 - g 81 -7.3 -4.67011 | overlap 99671 AATGTGATGCAAAAA GGCGGGC GGGCA GCCCGTC AGGCCCGGATGTTCA TERM 93 99781 - 99731 - g 85 -3.1 -5.31877 | gap 1 AGTCAGCATAAAAAA TCCCGACAACAG-CGGCCAGGCGC TCCC GCTCACGTATGTCTGTTGCCGGGA GCAGGCAGAGGACGG TERM 94 99841 - 99828 - g 82 -9.5 -4.26903 | opp_overlap 99839, overlap 99829 CTGACGTCAGGAAAA GCGGC GAGT GCCGC CGATGCACGACGTAT CP0119 99455 - 100231 + | putative transposase TERM 95 100280 - 100250 - T 100 -17.1 -3.14564 | TTACCTGGTGATGAA GTCTCTTGATCAG GAGCT CTGATCAAGAGAC AGCAGCTTAGGGGGG CP0120 101517 - 100321 - | ISSfl2 ORF TERM 96 101354 - 101379 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 101334, overlap 101340 101355 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT CP0121 102713 - 101709 - | IS100 ORF1 TERM 97 102664 - 102679 + g 70 -4.6 -4.56914 | overlap 102665 GTCCGGCTACTCATT CCCTGC TTGT GCAGGA TTTTAATTTCCATAA TERM 98 102736 - 102716 - H 100 -15.5 -3.46848 | overlap 102706 CAAAAGTGACCATAA GCTCTCCTG AAT CAGGAGAGC AGATTACCCCCTGGA ipaJ 104066 - 104845 + | IpaJ, invasion plasmid antigen virB 106721 - 105792 - | transcriptional activator VirB TERM 99 106238 - 106250 + g 77 -3.4 -5.14477 | GAGTGACTTTCGCGC GAGA CAGAT TCTC TTTTTTGGCTATGTC TERM 100 106659 - 106670 + g 72 -4.4 -4.68655 | TTTATTACCAGAATG GAGT GTAA ACTC TTTCTTTTGGCCTTC acp 107174 - 106938 - | Acp, putative acyl carrier protein TERM 101 107148 - 107158 + g 100 -2.6 -5.86976 | ATAGCAAAAGGCCAC TATT GAT AATA TTTTTTCTTTTATCA ipaA 109079 - 107178 - | hypothetical protein TERM 102 107350 - 107311 - G 76 -12.4 -2.60723 | gap 1, opp_overlap 107319, overlap 107310 TCATCTGTAAGTAAT TCTGCAGAGGTATCGTCAA TTT TTGACAATACCT-TGCTGA GGGCGCTAGATACTT TERM 103 107319 - 107343 + g 70 -10.1 -3.14344 | opp_overlap 107311 107310 AAGTAATTCTGCAGA GGTATCGTCAA TTT TTGACAATACC TTGCTGAGGGCGCTA TERM 104 108386 - 108399 + g 73 -3.9 -4.77896 | CTATACCAAATCCTT TACTA TCAA TAGTA TTTTTACGTTGATTG TERM 105 108441 - 108429 - G 72 -7.7 -3.8901 | GCGCAAACTATCAAA GGCAA GTT TTGCC TGTGCGTCAACTAAA ipaD 110086 - 109088 - | hypothetical protein ipaC 111228 - 110137 - | IpaC, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells TERM 106 110953 - 110936 - G 74 -9.9 -3.42373 | opp_overlap 110926, overlap 110927 110934 GAAAGACTGGAAATA TCCAGAG TGTT CTCTGGA GTAAGGGTGTGACTC TERM 107 111261 - 111284 + r 73 -11.2 -2.66255 | opp_overlap 111271, overlap 111242 111259 TATCAAGCAGTAGTT TGTTGCAAAA TTGC TTTTGCAACA TCAGTTCTATTAGCC ipaB 112990 - 111248 - | IpaB, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells TERM 108 111791 - 111805 + g 83 -5.7 -5.0538 | opp_overlap 111789 111791 TGCCCCCAGAATAGA GCCAA TCATT TTGGC TTTTTTCGAGTCGAC TERM 109 112021 - 112011 - G 71 -3.2 -4.82901 | overlap 111976 112013 GCTCCTCCAGAAAAA GCTG CTG CAAC AACACTAACGATAGT TERM 110 112317 - 112333 + g 70 -3.7 -4.67234 | opp_overlap 112317 GTGTTTGAAAATGCA GAAAAAG AGT CTATTTC TTTTTCGAGTTGCAT ipgC 113463 - 112996 - | IpgC, cytoplasmic chaperone for IpaB and IpaC TERM 111 113301 - 113284 - G 79 -4.1 -5.07275 | opp_overlap 113284 113285, overlap 113285 GTATATACATAAAAA CCTGAAG AAAA CTTCAGC TTCCTCTATTCTTCC ipgB1 114146 - 113520 - | IpgB1, secreted by the Mxi-Spa machinery, function unknown ipgA 114551 - 114162 - | IpgA, similarities to IpgE, putative chaperone TERM 112 114431 - 114420 - G 70 -4.4 -4.57341 | opp_overlap 114420 AAGTCCGGTCAAAAA GATG TATT CATC ATTATCTGTTATACA TERM 113 114434 - 114454 + g 70 -4.8 -4.44667 | AGATGTATTCATCAT TATCTGTT ATACA AACAGGTA TTTGTTCTTCGAGCA TERM 114 114505 - 114477 - G 70 -6.1 -4.23674 | opp_overlap 114478, overlap 114478 TTCGAGCAATATAAA GGCTTGATTTTTA TCG TTAAAATCAAGCT TTGCACCTGTTATTT TERM 115 114478 - 114504 + g 73 -9.6 -3.62176 | opp_overlap 114477 114478 TCGAGCAATATAAAG GCTTGATTTTTA TCG TTAAAATCAAGC TTTGCACCTGTTATT icsB 116048 - 114564 - | IcsB, invasion protein TERM 116 114670 - 114686 + g 81 -6.7 -4.72386 | opp_overlap 114670 AGAGAATTGTAATAA TCAATAA TTT TTATTGA TTTTTCGATGATTTC TERM 117 115176 - 115191 + g 84 -7.6 -4.71061 | ATTTGCCAATTGTCT GAAAGC ATCT GCTTTC TTTTTGCATATAAAT TERM 118 115308 - 115331 + g 100 -2.4 -5.95166 | overlap 115312 TACTTTATCAGCACT GACCCC CCAATAACCATA GGGGTC TTTTTTTTGATTAGC TERM 119 115312 - 115329 + g 75 -5.5 -4.61485 | overlap 115308 TTATCAGCACTGACC CCCCAAT AACC ATAGGGG TCTTTTTTTTGATTA TERM 120 116254 - 116235 - H 76 -7.8 -4.27519 | ATCCCACAAGATAAA GTGCCTGA TGTA TCAGGCTC GGAGTGTTATAGAAA ipgD 116362 - 117978 + | hypothetical protein ipgE 117988 - 118350 + | IpgE, cytoplasmic chaperone for IpgD ipgF 118350 - 118808 + | IpgF, periplasmic protein, similarities to the catalytic site of lyzozymes mxiG 118817 - 119932 + | MxiG, component of the Mxi-Spa secretion machinery, contains one transmembrane segment mxiH 119940 - 120191 + | MxiH, component of the Mxi-Spa secretion machinery mxiI 120204 - 120497 + | MxiI, component of the Mxi-Spa secretion machinery TERM 121 120514 - 120524 + G 71 -2.6 -5.00467 | TTATATGATTAGGTA TAAA GGT TTTA TTTTATTCTTGTTGC mxiJ 120503 - 121228 + | MxiJ, lipoprotein, component of the Mxi-Spa secretion machinery TERM 122 121728 - 121718 - g 71 -3.2 -4.74706 | TGCAATATGCAAAAA GGCA CTT TACC GGTATCCAGACATCA mxiK 121225 - 121752 + | MxiK, putative component of the Mxi-Spa secretion machinery mxiN 121694 - 122389 + | MxiN, putative component of the Mxi-Spa secretion machinery TERM 123 122416 - 122399 - g 70 -4.9 -4.58308 | gap 1, overlap 122408 GATTAATCAAATAAA TGCA-AGC AAT GCTCTGCA GCAAAGATTAAATAG mxiL 122382 - 122789 + | MxiL, secreted by and putative component of the Mxi-Spa secretion machinery mxiM 122773 - 123201 + | MxiM, lipoprotein, component of the Mxi-Spa secretion machinery mxiE 123331 - 123963 + | AraC-like family protein MxiE mxiD 123950 - 125650 + | outermembrane protein MxiD mxiC 125669 - 126736 + | Mxi-Spa secretion machinery protein TERM 124 127612 - 127635 + G 74 -6 -4.55016 | TACATCAGCTCTTGC CTTGGCGATA GGGA TGTTGCCAGG TTTTCCGTTTTTTGT mxiA 126749 - 128809 + | MxiA, innermembrane protein, component of the Mxi-Spa secretion machinery spa15 128822 - 129223 + | Spa15, putative component of the Mxi-Spa secretion machinery TERM 125 129613 - 129630 + G 74 -2.6 -5.02476 | opp_overlap 129613 GCTATATAGTGAAAG GGCTGC AATTGA GAAGCC TTTTTTAACAGGTAT TERM 126 130440 - 130416 - g 74 -6.5 -4.46212 | CCTCTCAGGATAAAA TCTACAACAAA ATA TCTGTTGTTGA GAGTTTTCTGAAGCA spa47 129227 - 130519 + | ATP synthase SpaL spa13 130612 - 130950 + | Spa13, component of the Mxi-Spa secretion machinery TERM 127 131246 - 131224 - g 71 -2.1 -4.93877 | overlap 131227 GGCCATTAAAGAAAA TATTTTGAT ACCAG ATCAAGATA TCAAAGCAAGGGAAA TERM 128 131279 - 131269 - g 79 -4 -5.08015 | AAGGGAAAAAATAAA TATC GGC GATA TGAGGGGGATCTTTT TERM 129 131556 - 131546 - g 79 -4 -5.08601 | TCATTGCAAGAAAAA TCAA TAG TTGA AAATGATAAAAATGT spa32 130937 - 131815 + | Spa32, secreted by and component of the Mxi-Spa machinery TERM 130 131971 - 131981 + G 76 -4 -5.00616 | opp_overlap 131980 TGGGTAATTCGTATT GATA CAT TATC TTTTTTGAAAAAAAA spa33 131944 - 132690 + | Spa33, component of the Mxi-Spa secretion machinery spaP 132695 - 133345 + | surface presentation of antigens protein SpaP spa9 133360 - 133620 + | Spa9, component of the Mxi-Spa secretion machinery spa29 133620 - 134390 + | Spa29, component of the Mxi-Spa secretion machinery spa40 134397 - 135425 + | surface presentation of antigens protein SpaS TERM 131 136252 - 136235 - T 82 -11.3 -3.57561 | opp_overlap 136245, overlap 136245 136246 GCTGAACTGGCTAAA GGCCTCA AAAC TGAGGCC GACCTCAATCAGTTT CP0157 136982 - 136257 - | IS600 ORF2 CP0158 137320 - 137018 - | IS600 ORF1 CP0159 137406 - 137594 + | IS600 ORF2 CP0160 137606 - 137770 + | IS1294 transposase CP0161 137785 - 137973 + | IS1294 transposase CP0162 138309 - 137953 - | hypothetical protein TERM 132 138236 - 138226 - G 79 -4.6 -5.00616 | overlap 138227 138228 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 133 138771 - 138757 - R 72 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 134 138866 - 138854 - R 76 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG CP0165 139590 - 139297 - | IS3 ORF2 TERM 135 139382 - 139409 + g 75 -4.7 -4.74504 | overlap 139357 139357 GCCTTTGCCCTCAGC CCCTGACGGCG CAGGCT TGCCGCCACGG TTTTTACGTTAAAGT CP0166 139866 - 139651 - | IS3 ORF1 CP0167 140324 - 139920 - | hypothetical protein TERM 136 140348 - 140368 + r 73 -11.2 -2.66316 | opp_overlap 140367 TCACTTTCCGTTACT GGTGCTGT CCGTC ACAGCACC TCATGTCCTGCGGAC CP0168 141592 - 140876 - | hypothetical protein TERM 137 142109 - 142140 + rH 84 -10.8 -3.9442 | overlap 142107 142111 GACAATGTCATGCTC TCGCCCGTTCCGGT AATA AACGGAGCGGGCTA TCTTTTTGGAATATT TERM 138 142111 - 142138 + rH 90 -13.4 -3.54926 | overlap 142109 142107 CAATGTCATGCTCTC GCCCGTTCCGGT AATA AACGGAGCGGGC TATCTTTTTGGAATA CP0170 142983 - 142609 - | hypothetical protein CP0169 142682 - 143110 + | hypothetical protein CP0171 143116 - 143442 + | IS629 ORF1 TERM 139 143758 - 143746 - gf 72 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC CP0172 143657 - 144064 + | IS629 ORF2 CP0173 144033 - 144326 + | IS629 ORF2 CP0174 144559 - 144329 - | putative transposase CP0175 145160 - 144804 - | IS91 orf CP0176 145582 - 145160 - | putative IS91 ORF2 TERM 140 145538 - 145556 + g 75 -4.6 -4.84359 | opp_overlap 145540, overlap 145540 CATATAACTACCTGA AAGACAAT GAT ATTGTCTG TTTTTATAACGGTAA TERM 141 145540 - 145554 + g 70 -7.2 -4.04397 | opp_overlap 145540, overlap 145538 TATAACTACCTGAAA GACAAT GAT ATTGTC TGTTTTTATAACGGT CP0177 146484 - 146245 - | putative reverse transcriptase TERM 142 146350 - 146380 + g 72 -10.6 -3.05876 | gap 1, overlap 146339 146337 146347 146374 AGCAGTACTTCGGCC TCGCTGGATACTG TGATTC CAGTA-CCAGCGA TCCTTTCTGGCTTTT CP0178 146873 - 146631 - | IS3 ORF2 CP0179 147409 - 146846 - | IS629 ORF2 CP0180 147734 - 147516 - | IS629 ORF1 TERM 143 147864 - 147877 + r 82 -3.1 -5.45726 | overlap 147865 AATAGTTTATAGAGC TGTTC TGAA GAACG TTTTTTTACAGTCTG virA 149115 - 147913 - | VirA, secreted by the Mxi-Spa secretion machinery, function unknown TERM 144 148188 - 148207 + g 73 -4.2 -4.78933 | TAATAACTCGTTGTT CAGGCATG AAAT TAAGCCTG TTTTCTATGTTTTCG TERM 145 149375 - 149358 - H 76 -4.2 -4.96848 | GGGTGTATAGAAAAA CAAAGT GGTTAA ACTTTG GGCAAGCGTACAGAA icsA/virG 149644 - 152952 + | hypothetical protein TERM 146 152985 - 152962 - f 81 -5.2 -5.18726 | opp_overlap 152962 TTCTGATAATAAAAA TGCAGGGCGT GTTG ATGTCCTGCA TTTCTCTGGGACCCA TERM 147 152962 - 152985 + F 83 -9.6 -4.03234 | opp_overlap 152962 TTCTGATAATAAAAA TGCAGGGCGT GTTG ATGTCCTGCA TTTCTCTGGGACCCA TERM 148 152997 - 153020 + F 100 -10.2 -4.84359 | TGCATTTCTCTGGGA CCCACCGTGT AAAA GCTCGGTGGG TTTTTGTGCACATGA TERM 149 153246 - 153259 + F 70 -2.3 -5.0916 | ATATATGACTCTACT GTACC AGCT GGAAC TTTTTCTATTCAGGA TERM 150 153356 - 153339 - f 81 -4.9 -5.10163 | overlap 153334 AATGGTAAAAGAAAA CATTTCC AAGT AGAAATG TGCAGGTGTGCCTTT CP0183 153587 - 153913 + | IS629 ORF1 TERM 151 154229 - 154217 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC CP0184 154128 - 154796 + | IS629 ORF2 TERM 152 155172 - 155157 - gf 100 -2.6 -6.07627 | ACCGTTAAAAAAAAA CATTAC GCTA ATAATG TTCACCCTGTCATTA TERM 153 156509 - 156499 - gf 74 -8.2 -3.88498 | GTGGCACAGATGAAA CCGG ATT CCGG AGCCTACCCACAATT ushA 155137 - 156789 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 154 156879 - 156891 + GT 73 -4.1 -4.85822 | TTTGCGATATGGGAA TGCAG TTG CTGTA TTTTGTGTTTCTGCT CP0186 156758 - 156943 + | hypothetical protein CP0187 157622 - 157296 - | hypothetical protein CP0188 158478 - 157675 - | putative reverse transcriptase TERM 155 157814 - 157800 - G 76 -12.8 -2.62616 | opp_overlap 157800, overlap 157788 GCAGGGGGGAGATTA CGCCGC CCT GCGGCG TTCCTCGACCCCGTG TERM 156 157800 - 157814 + g 81 -12.8 -3.14344 | opp_overlap 157800 157788 GCAGGGGGGAGATTA CGCCGC CCT GCGGCG TTCCTCGACCCCGTG TERM 157 158296 - 158316 + g 72 -6 -4.40993 | TGTCTGCCCGTCAAT GCCTGCCG CCCCA CGGTTGGC TTTTACTCGTTTATA CP0189 158691 - 158491 - | IS600 ORF2 TERM 158 159565 - 159549 - g 72 -5.1 -4.44211 | overlap 159551 TGTAATACAAAAGAA CAGGATA CAT TATCCAG AAATGGCTCTTATCC TERM 159 159817 - 159801 - g 76 -3.7 -5.01535 | GCACAATTACAAAAA GCGAA AGATGAA TTCGC TAACAATCAGAAAAA phoN1 159087 - 159836 + | PhoN1, periplasmic non specific acid ohosphatase TERM 160 159880 - 159909 + T 89 -9.3 -4.59109 | overlap 159882 CGACCTTCAGGGCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCAGGGCTGTG TERM 161 159882 - 159907 + T 100 -16.3 -3.90762 | overlap 159880 ACCTTCAGGGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCAGGGCTG CP0191 160395 - 160006 - | ISSfl1 ORF2 TERM 162 160417 - 160436 + r 79 -8.6 -4.25104 | opp_overlap 160405, overlap 160405 TAACGGGAGGCCACT TCCGTCTG TTGC CAGATGGA TTTTGGTGCCAAAAC CP0192 160850 - 160401 - | ISSfl1 ORF1 CP0193 161276 - 160896 - | hypothetical protein TERM 163 161415 - 161461 + r 100 -10.6 -5.44119 | gap 1, opp_overlap 161422, overlap 161417 TGATTTTTTAGTATG T-ATAAAAGAAGAGCAGGT AATTGACTGA ACCTGCTCTTCTTTTATTA TTTTTTTAACATAGA TERM 164 161417 - 161458 + r 100 -14.8 -4.80853 | opp_overlap 161422, overlap 161415 ATTTTTTAGTATGTA TAAAAGAAGAGCAGGT AATTGACTGA ACCTGCTCTTCTTTTA TTATTTTTTTAACAT TERM 165 161453 - 161422 - R 93 -10.3 -4.43844 | opp_overlap 161417 161415 TTAGTATGTATAAAA GAAGAGCAGGT AATTGACTGA ACCTGCTCTTC TTTTATTATTTTTTT stbB 161854 - 161459 - | plasmid stable inheritance protein TERM 166 161670 - 161659 - G 100 -5.8 -5.47218 | opp_overlap 161637 TCTCACTGAAAAAAA CGCT GATT AGCG TTAACAGTCGGGGGG TERM 167 161756 - 161733 - G 72 -7.4 -3.86015 | GATTGTCTGTAGAAA TCTCCCCGCA TTTG TACTGGGAGA GAGTCTATTGTTTGT stbA 162813 - 161854 - | plasmid stable inheritance protein TERM 168 162037 - 162064 + g 93 -2.1 -5.64421 | gap 1, overlap 162028 162040 TTCTGCCAGAGATTT CACTTCTC-TGT CTATT ACATGAGAAATG TTTTTTATTTCAGCT TERM 169 163305 - 163322 + G 72 -8.4 -3.85698 | opp_overlap 163296 TTAAACGACTGGCCA GCGGTG CAGTCA CACCGC TTTATCGCCGCGCCA yccB 163184 - 164155 + | hypothetical protein TERM 170 164165 - 164190 + G 100 -16.9 -4.07568 | overlap 164169 GGATGAAGTATGACG GAGACGGGCGG GCAA CCGCCCGTTTC TTTTCCGACAAAGGA TERM 171 164169 - 164186 + G 100 -14.1 -4.64861 | overlap 164165 GAAGTATGACGGAGA CGGGCGG GCAA CCGCCCG TTTCTTTTCCGACAA CP0197 164152 - 164463 + | hypothetical protein TERM 172 164487 - 164505 + F 77 -11.7 -2.87132 | opp_overlap 164497, overlap 164503 CAGGCAGCGGGGAAC GGGCACC ACAGG GGTGCCC TCTGTAAGAGAAGGA ycdA 164527 - 165210 + | putative methylase TERM 173 165247 - 165235 - g 90 -7.7 -4.8048 | overlap 165237 GCCGGACACGAAAAA CTTCG CGC CGAAG TGGCGGAGGTGGCCA TERM 174 165340 - 165357 + G 72 -7.7 -3.90744 | GACACCCTGCCGGAA CGTCTGG TGCG TCAGACG TTGTTTCGCGCAAAC yceA 165211 - 165432 + | hypothetical protein CP0200 165429 - 165629 + | hypothetical protein CP0201 165663 - 165878 + | hypothetical protein ycfA 165923 - 166693 + | hypothetical protein CP0203 167685 - 167032 - | putative transposase CP0204 169361 - 167760 - | ISSfl4 ORF3 TERM 175 169108 - 169125 + g 82 -9.1 -4.19238 | overlap 169096 TCTTCCAGAAGATTT CTGGCTG TGTT CAGCCGG TTTTCCAGTTCCGAC TERM 176 169130 - 169167 + g 70 -6.2 -4.1585 | overlap 169131 169135 TGTTCAGCCGGTTTT CCAGTTCCGACAGTCG TTTTTC TGCCTGTCGGATCTGA TTTTCAAGCTTATGA CP0205 169708 - 169358 - | ISSfl4 ORF2 CP0206 170379 - 169705 - | ISSfl4 ORF1 TERM 177 170043 - 170031 - GR 73 -9.1 -3.62046 | opp_overlap 170023 CGATCCGGGCAACAA CAGCC CCA GGCTG TAATGCCTGCTTAGC CP0207 171064 - 170327 - | IS2 ORF2 TERM 178 170383 - 170410 + gr 77 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG CP0208 171500 - 171135 - | insertion sequence 2 OrfA protein CP0209 172610 - 171972 - | hypothetical protein CP0210 173239 - 172967 - | iso-IS1 ORF1 TERM 179 173434 - 173407 - H 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 180 173774 - 173786 + G 73 -9.1 -3.62046 | GCTAAGCAGGCGTTA CAGCC TGG GGCTG TTGTTGCCCGGATCG CP0211 173438 - 174112 + | ISSfl4 ORF1 CP0212 174109 - 174456 + | ISSfl4 ORF2 TERM 181 174707 - 174670 - g 70 -6.2 -4.1585 | overlap 174671 174675 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 182 174729 - 174712 - g 82 -9.1 -4.19238 | overlap 174725 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA CP0213 174476 - 176077 + | ISSfl4 ORF3 TERM 183 176492 - 176471 - g 81 -13.1 -2.64243 | opp_overlap 176471 176475, overlap 176475 GGACATCTGACATCA CAAATCCCC GGGT GGGGATTTG TGTATAAGAGACAGC TERM 184 176471 - 176492 + G 82 -13.1 -2.87132 | opp_overlap 176471 176475, overlap 176475 GGACATCTGACATCA CAAATCCCC GGGT GGGGATTTG TGTATAAGAGACAGC CP0214 176266 - 176499 + | IS100 ORF2 TERM 185 176475 - 176488 + T 76 -8.1 -4.12532 | opp_overlap 176471 176475, overlap 176471 ATCTGACATCACAAA TCCCC GGGT GGGGA TTTGTGTATAAGAGA TERM 186 176488 - 176475 - T 76 -8.1 -4.01888 | opp_overlap 176475 176471, overlap 176471 ATCTGACATCACAAA TCCCC GGGT GGGGA TTTGTGTATAAGAGA CP0215 176841 - 176551 - | hypothetical protein TERM 187 176613 - 176626 + gT 73 -3.9 -4.82901 | CGGTTTCAGCATCCA TTATG CCGT CATAA TTTTTCTGCCGGAAA CP0216 177061 - 176810 - | hypothetical protein CP0217 177513 - 177797 + | hypothetical protein CP0218 177797 - 178072 + | hypothetical protein TERM 188 178226 - 178204 - g 70 -4 -4.63107 | ATGAAATAACGAAAA TTACCGCTCG TGA CTGGCGGCAA TATCGCGCTCCGGGC CP0219 178125 - 178304 + | hypothetical protein insB 178801 - 178298 - | IS1 ORF2 CP0221 178876 - 179178 + | putative IS1 encoded protein CP0222 179387 - 179605 + | putative protein encoded within IS CP0223 179624 - 180004 + | ISSfl4 ORF3 ccdA 180540 - 180758 + | plasmid maintenance protein CcdA TERM 189 181014 - 180997 - g 85 -11.3 -3.62597 | GTTATCGGGGAAGAA GTGGCTG ATCT CAGCCAC CGCGAAAATGACATC ccdB 180739 - 181065 + | plasmid maintenance protein CcdB TERM 190 181586 - 181566 - g 72 -5.3 -4.45259 | overlap 181567 AAATGGGAAAAACAA GCGCTCCCC GGT GAAGAGCGT GATGAGGCTGTCTCC ipaH9.8 181458 - 183095 + | invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery TERM 191 183222 - 183237 + F 72 -10.4 -2.82635 | GAGTGCCGCCTTACA TGCCGC TGGC GCGGCA TATCCTGGTGACGAT TERM 192 183758 - 183772 + F 70 -5 -4.53303 | CTGGACCACACAAGG TAGCGT GTA ACGTTA TTTTGTGTGAAAATC TERM 193 184351 - 184337 - g 82 -2.9 -5.26875 | GCTGCAACCAAAAAA GATAA AGAGA TTATC GACCGACGATTACAA ospG 183824 - 184414 + | OspG, secreted by the Mxi-Spa secretion machinery, function unknown mob9 184661 - 184482 - | plasmid mobilization protein TERM 194 185030 - 185020 - H 76 -2.4 -5.40072 | opp_overlap 185028 CCGGTGGTAAAAAAA CGTC CCC GGCG GCCTAATGCCGATCA TERM 195 185110 - 185085 - H 72 -9.1 -3.61398 | opp_overlap 185085 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 196 185085 - 185110 + H 100 -9.8 -5.61596 | opp_overlap 185085 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT CP0231 186424 - 186753 + | IS629 ORF1 TERM 197 187069 - 187057 - g 70 -4.8 -4.56597 | overlap 187059 TCTCCGGGGTAAAAA GGTC CGTAT GACC ATCAGCCGGAAAGCC CP0232 186968 - 187636 + | IS629 ORF2 TERM 198 187768 - 187739 - f 89 -9.3 -4.59109 | overlap 187741 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TAAGGCCGCCGGGGA TERM 199 187766 - 187741 - f 100 -16.3 -3.90762 | overlap 187739 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAAGGCCGCCGGG TERM 200 187775 - 187785 + F 76 -2.4 -5.40072 | GACTGGCATTAAGGC CGCC GGG GACG TTTTTTTACCACCGG TERM 201 188133 - 188106 - f 76 -4.7 -4.74504 | overlap 188107 188108 ACTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG GCTGAGGGCAAAGGC CP0233 188108 - 188326 + | IS3 ORF2 CP0234 191226 - 188314 - | hypothetical protein TERM 202 190104 - 190093 - G 71 -2.2 -4.91511 | ACTCCATGAGAAAAA GCTC GGAT GAAC TATCTGATTGGCATC shf 191709 - 192551 + | putative carbohydrate transport protein rfbU 192554 - 193642 + | UDP-sugar hydrolase TERM 203 193681 - 193692 + G 72 -4.4 -4.67552 | TATCATTTATCGGTT TCCT TAAA AGGA TTGTTTTTTCCTCAG virK 193647 - 194597 + | hypothetical protein TERM 204 194859 - 194839 - g 72 -5.3 -4.48072 | opp_overlap 194841 194855, overlap 194840 194841 AGATTGAGCAGAAAA GCTCGTCGC AGG GCGACGATT AATTTATCGCTTTGT TERM 205 194857 - 194841 - g 76 -12.3 -2.5639 | opp_overlap 194841 194855, overlap 194840 194839 ATTGAGCAGAAAAGC TCGTCGC AGG GCGACGA TTAATTTATCGCTTT TERM 206 194841 - 194857 + G 88 -12.3 -3.63662 | opp_overlap 194840 194839 194841, overlap 194855 ATTGAGCAGAAAAGC TCGTCGC AGG GCGACGA TTAATTTATCGCTTT msbB2 194662 - 195606 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase CP0239 196716 - 195760 - | IS630 orf TERM 207 195806 - 195825 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 195818 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG CP0242 197884 - 197582 - | IS600 ORF1 traD 197923 - 198108 + | DNA transport protein mvpA 198515 - 198117 - | plasmid maintenance protein TERM 208 198227 - 198257 + Gg 78 -11 -3.55842 | opp_overlap 198228, overlap 198228 CGATCATTTGATCAA ATGGCCCGACAGGG CGT CCCTGACGGGCAAG TTCTGCTCTTATCTG TERM 209 198228 - 198256 + Gg 90 -14.5 -2.72782 | opp_overlap 198228, overlap 198227 GATCATTTGATCAAA TGGCCCGACAGGG CGT CCCTGACGGGCAA GTTCTGCTCTTATCT TERM 210 198256 - 198228 - Gg 100 -14.5 -3.75169 | opp_overlap 198227 198228 GATCATTTGATCAAA TGGCCCGACAGGG CGT CCCTGACGGGCAA GTTCTGCTCTTATCT mvpT 198742 - 198515 - | plasmid maintenance protein trbH 198108 - 198827 + | hypothetical protein CP0247 198803 - 199195 + | oriT nicking and unwinding protein TERM 211 200365 - 200353 - g 70 -4.1 -4.60487 | overlap 200354 GACCAGGGCGAAAAA CTCTC CCT GAAAG AGACGTTAACCCTGC CP0248 199216 - 200580 + | oriT nicking and unwinding protein TERM 212 200945 - 200935 - g 86 -6.8 -5.00616 | TCCGGCCGGAAAAAA TGCC GGT GGCA GACGGTGAGCGTCTG TERM 213 201148 - 201168 + G 75 -5.4 -4.67353 | gap 1 AAACGCCCGGGCATT CCGTCAGCG ACAG TGC-GACGG TTTTTGCCTCCGTCA TERM 214 204021 - 203996 - g 74 -7.6 -4.07687 | AGTTGCCCGGGAAAA TTTGCTGCAG GAGCGT CTGCAGCAGA TGGAGCGGGATATGG CP0249 200577 - 204077 + | oriT nicking and unwinding protein TERM 215 204072 - 204061 - f 71 -3.6 -4.84918 | TGCAGAAAGAGAAAA CCCC GGGC GGAG ACTGATACAGGAAGA TERM 216 204531 - 204545 + G 76 -9.2 -3.85698 | opp_overlap 204514 GGCCATACTCCTGAT GGCCCT GTG GGGGCC TTTGTCCGGCACCAG TERM 217 204770 - 204786 + G 72 -5.1 -4.58283 | GAAAATCATTACCCC GTTTCTG GCC CGGAGAC TTTTTCCCGACGTTC traX 204097 - 204843 + | conjugal transfer pilus acetylation protein TraX TERM 218 205087 - 205069 - g 82 -2.2 -5.40072 | opp_overlap 205072 205078 CTGGCGGCAAAAAAA GCGCAGGC CAG ACAGGCGC TGTCCATTTATCTGA TERM 219 205170 - 205206 + G 70 -10 -3.14344 | ATTATTTGACGGTGA CACGCCCCGGCTTCTG GCCTG CGGTATCCGGGACGTG TTACTGGAAGACGTG TERM 220 205269 - 205255 - g 95 -7 -5.24129 | overlap 205257 CTCTCGCATAAAAAA CTGCGC AGG GCGCTG AAGGCCATCACCCGT finO 204898 - 205458 + | conjugal transfer fertility inhibition protein FinO TERM 221 205485 - 205464 - f 100 -10.1 -6.02919 | TGAGAAATAAAAAAA GCCTCCCCC AGAG AGAGGAGGC AGGGAAATAAGGCTT TERM 222 205601 - 205590 - g 71 -3 -4.77567 | AGGGGGACAAGAAAA TGAA TGGA TTCA GAAACAGTTCACGGA yigA 205589 - 205801 + | hypothetical protein TERM 223 205843 - 205810 - f 91 -7.5 -5.26875 | gap 1, overlap 205811 GGTGTAACGAAAAAA GCAGCCTTCATTACTC TAG GAGTCA-GAAGGCTGA AAGGAGTTTATGAGA TERM 224 205842 - 205811 - f 86 -11 -3.75402 | gap 1, overlap 205810 GTGTAACGAAAAAAG CAGCCTTCATTACTC TAG GAGTCA-GAAGGCTG AAAGGAGTTTATGAG yigB 205985 - 206287 + | hypothetical protein CP0254 207146 - 206328 - | IS600 ORF2 CP0255 207484 - 207182 - | IS600 ORF1 CP0256 207606 - 207773 + | hypothetical protein yihA 208067 - 208657 + | hypothetical protein TERM 225 209129 - 209117 - g 72 -6.3 -4.37092 | AGTTCGTTGAGAAAA TCATC AAA GATGA ACTGCAGAGACTGGA repB 208897 - 209157 + | replication protein TERM 226 209329 - 209283 - f 100 -9 -5.1417 | gap 1 CCAGAAAAGCAAAAA CCCCGATAATCTTCTTTAACT TTGGCG AGTCAGA-AAGATTACCGGGG CCCACTTAAACCGTA tap 209381 - 209455 + | leader peptide RepL TERM 227 209576 - 209558 - g 70 -5.9 -4.22346 | opp_overlap 209558 209557 209560 GAAACTGATGGAAAA GGCGGTG GGCTT CACCTCC CGTTTTGATTTCGCC repA 209448 - 210305 + | replication protein TERM 228 210341 - 210326 - f 83 -10.4 -3.79113 | ACCTCCTCAGAATAA TCCGGC ACGC GCCGGA GGCATTCGCACGCCT TERM 229 210842 - 210792 - f 100 -19 -2.57132 | opp_overlap 210792 210798, overlap 210798 CGCCCCCCTCATAAC TGAAAAGCGCCGCCGCCCCCGCCC AAA GGGCGGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 230 210792 - 210842 + F 85 -12.4 -3.43961 | opp_overlap 210792 210798, overlap 210798 CGCCCCCCTCATAAC TGAAAAGCGCCGCCGCCCCCGCCC AAA GGGCGGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 231 210836 - 210798 - f 100 -18 -4.3208 | opp_overlap 210792 210798, overlap 210792 CCTCATAACTGAAAA GCGCCGCCGCCCCCGCCC AAA GGGCGGGAACAGAGTCGC TTTTAATTATGAATG TERM 232 210798 - 210836 + F 95 -11.4 -4.50058 | opp_overlap 210798 210792, overlap 210792 CCTCATAACTGAAAA GCGCCGCCGCCCCCGCCC AAA GGGCGGGAACAGAGTCGC TTTTAATTATGAATG CP0261 211006 - 211197 + | hypothetical protein CP0262 212623 - 211427 - | IS1294 transposase TERM 233 211740 - 211752 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 234 211836 - 211850 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 235 212371 - 212381 + g 79 -4.6 -5.00616 | overlap 212366 212365 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC CP0263 212821 - 212633 - | IS1294 transposase TERM 236 213029 - 213012 - g 73 -9.1 -3.57561 | overlap 213022 213023 GCTGAACTGGCTAAA GGCCTCA AAAC CGAGGCC GACCTCAATCAGTTT CP0264 212967 - 213134 + | putative transposase ipaH1.4 214879 - 213152 - | invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery TERM 237 214885 - 214915 + r 100 -17.2 -3.07443 | opp_overlap 214885 214891, overlap 214891 ATTTAATCATTATAA CTAGAATTCTTATC AAC GATAAGAATTCTAG TTAAATAGAATATGG TERM 238 214915 - 214885 - R 100 -17.2 -3.47494 | opp_overlap 214885 214891, overlap 214891 ATTTAATCATTATAA CTAGAATTCTTATC AAC GATAAGAATTCTAG TTAAATAGAATATGG TERM 239 214909 - 214891 - R 72 -9 -3.57783 | opp_overlap 214885 214891, overlap 214885 TCATTATAACTAGAA TTCTTATC AAC GATAAGAA TTCTAGTTAAATAGA TERM 240 214891 - 214909 + r 72 -9 -3.52652 | opp_overlap 214891 214885, overlap 214885 TCATTATAACTAGAA TTCTTATC AAC GATAAGAA TTCTAGTTAAATAGA ospE1 215534 - 215268 - | OspE1 TERM 241 215560 - 215570 + r 82 -2.6 -5.55698 | overlap 215554 215559 TATGTTATATTTTGG TAAA AAA TTTA TTTTTTTACATTATA CP0266 216334 - 216182 - | hypothetical protein CP0267 216373 - 216756 + | IS600 ORF1 CP0268 216790 - 217128 + | IS911 ORF1 TERM 242 217234 - 217214 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 243 217586 - 217575 - g 77 -5.8 -4.63218 | opp_overlap 217580 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG CP0269 217155 - 217994 + | IS911 ORF2 CP0270 218767 - 218919 + | IS3 ORF2 TERM 244 220121 - 220143 + F 100 -2.1 -6.20267 | ATCTATGGCCCCCGT TACTTTATT CGCAC AATGAGGTA TTTTTTTATTTTTAC icsP/sopA 220300 - 221247 + | outer membrane protease TERM 245 221229 - 221239 + T 75 -2.6 -5.1848 | TCTCACTTCCGCAGG TATA AAG TATA TTTTTTGAATTGGTT CP0272 221383 - 221216 - | IS629 ORF1