TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.475923 %AT, 3451082 nt, 29957 terms. Intergenic: 0.536053 %AT, H2T: 759458 nt, 6462 terms; T2T: 281979 nt, 5047 terms; H2H: 292586 nt, 4465 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|30061571|ref|NC_004741.1| Shigella flexneri 2a str. 2457T, complete genome (length 4599354) thrL 190 - 255 + | thr operon leader peptide TERM 1 280 - 301 + F 100 -13 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGACA GTGCGGGC TTTTTTTTCGACCAA TERM 2 301 - 280 - f 100 -13.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAC AGTGCGGGC TTTTTTTTCGACCAA TERM 3 654 - 642 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTGG TERM 4 2667 - 2654 - g 73 -3.7 -4.81249 | overlap 2655 GTTCAAAGTGAAAAA TGGCG AAAA CGCCC TGGCCTTTTATAGCC thrA 336 - 2798 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2800 - 3732 + | homoserine kinase thrC 3733 - 5019 + | threonine synthase TERM 5 5043 - 5069 + F 91 -8 -5.24129 | gap 1, opp_overlap 5042 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA S0005 5242 - 5529 + | hypothetical protein TERM 6 5557 - 5538 - T 73 -7.8 -4.13654 | overlap 5551 CCGCTAAATGACAAA TGCCGGGT AACA ATCCGGCA TTCAGCGCCTGATGC TERM 7 5563 - 5596 + T 76 -11.7 -2.62043 | opp_overlap 5551, overlap 5558 5573 CAATCCGGCATTCAG CGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACGTTAATTCTGCA TERM 8 5638 - 5669 + T 70 -10 -3.06133 | opp_overlap 5648 CTGCATGCTTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTGACTACAAACTTA yaaA 6458 - 5682 - | hypothetical protein TERM 9 6230 - 6213 - G 73 -9.1 -3.5882 | overlap 6221 6222 GACATCACCTTTAAA CGCCAGA ATCG CCTGGCG GGCATTCGCCGGCGT talB 8237 - 9190 + | transaldolase B TERM 10 9197 - 9226 + F 80 -12.9 -2.5294 | overlap 9196 9194 CTGCTGTAATCATTC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAGCCTG mogA 9305 - 9892 + | molybdenum cofactor biosynthesis protein TERM 11 9915 - 9898 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC GAGC GGGGGGA TCTCAAGACAATTAG yaaH 10493 - 9927 - | hypothetical protein TERM 12 10377 - 10367 - G 75 -6.8 -4.36914 | TGCCGCCGTAGAAAA TGCC CAT GGCA AGAATAATACCGTCC S0012 11355 - 10642 - | hypothetical protein TERM 13 10787 - 10747 - G 87 -14 -3.07994 | gap 1 TTTAACCCCATTTAA TGCTGCGC-CCACAGGGCC TCCC AGCCCCGCGCCGCGCAGCA AACCATGCCCAAGTA TERM 14 11109 - 11143 + g 90 -14.4 -2.96274 | overlap 11103 ATTTACCGTGTCCGC GCAGTTTGTTGGCGAT ACT ATCGCCACCAAAATGC TGTAATTCTCCGGCA TERM 15 11241 - 11253 + g 80 -5.5 -4.93968 | TCAGTATGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT yaaI 11785 - 11381 - | hypothetical protein TERM 16 11847 - 11873 + H 75 -3 -5.11112 | TTTACTGCTGATAAA GAGAAGATTCAG GCA CGTAATCTTTTC TTTTTATTACAATTT dnaK 12162 - 14078 + | molecular chaperone DnaK TERM 17 14142 - 14103 - f 84 -13.6 -2.91467 | gap 1, opp_overlap 14104 AAACGGGTAATTATA CTGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAT TERM 18 14104 - 14141 + F 100 -17.1 -3.25823 | gap 1, opp_overlap 14103 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 19 15242 - 15252 + G 70 -6.8 -4.03811 | overlap 15244 AGCACAACAGCCCGC GCTC AAA GAGC TTCTTTGATGGTGTG dnaJ 14167 - 15297 + | chaperone protein DnaJ TERM 20 15326 - 15309 - T 95 -12.7 -4.09739 | CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CTGGGTAAAAATAGG TERM 21 15394 - 15373 - T 73 -11.5 -2.74792 | opp_overlap 15373 15374, overlap 15372 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 22 15373 - 15394 + T 90 -13.7 -3.39449 | opp_overlap 15373 15372, overlap 15374 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 23 15374 - 15393 + T 90 -15 -2.63348 | opp_overlap 15373 15372, overlap 15373 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG gef 15610 - 15401 - | membrane toxin TERM 24 15618 - 15650 + H 72 -4.9 -4.64844 | gap 1, opp_overlap 15586 TTCAGCATATAGGAG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC TERM 25 16171 - 16184 + G 70 -6.7 -4.06611 | overlap 16168 ATTCTTTAGCAGTGA TGCCT CGGG AGGCA TTATTCTTATCATTG nhaA 16139 - 17305 + | pH-dependent sodium/proton antiporter TERM 26 17321 - 17340 + F 93 -10.7 -4.59414 | CAGGACGGTTTACCG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 17371 - 18270 + | transcriptional activator NhaR S0020 19186 - 18683 - | IS1 orfB S0021 19380 - 19105 - | IS1 orfA TERM 27 19724 - 19739 + r 74 -6 -4.57341 | opp_overlap 19725, overlap 19725 AGCAGGCATAAAAAA ACCCGC TTGC GCGGGC TTTTTCACAAAGCTT TERM 28 19738 - 19725 - R 100 -9.5 -5.64274 | opp_overlap 19724 19725 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 29 19725 - 19738 + r 73 -9.5 -3.33922 | opp_overlap 19725, overlap 19724 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 30 19754 - 19785 + r 72 -10.3 -2.89683 | opp_overlap 19763, overlap 19758 19762 CTTTTTCACAAAGCT TCAGCAAATTGGC GATTAA GCCAGTTTGTTGA TCTGTGCAGTCAGGT rpsT 20032 - 19769 - | 30S ribosomal protein S20 S0023 20135 - 20353 + | hypothetical protein TERM 31 21252 - 21240 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 20361 - 21302 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 32 21511 - 21493 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 33 22500 - 22479 - g 71 -9.5 -3.55622 | gap 1 GTGAACGTCTTCAAA GCG-AACGAC ATC GTCGTTGCGC TGCTGCAGGAAAAAG TERM 34 22563 - 22540 - g 81 -8.8 -4.38712 | overlap 22541 TGCACGTTGAGAAAA TGCAGCACAG CTAT CCGTGCTGCT GGCGTCACAAAACGC TERM 35 22562 - 22541 - g 81 -12.3 -3.22906 | overlap 22540 GCACGTTGAGAAAAT GCAGCACAG CTAT CCGTGCTGC TGGCGTCACAAAACG TERM 36 23994 - 23969 - g 71 -10.5 -2.88069 | gap 1, overlap 23966 TGCAGACTATAACGA CGCACCTGCTGA TGC TCAGCAGA-GCG AAGTACTCAAAGGGC ileS 21345 - 24161 + | isoleucyl-tRNA synthetase TERM 37 24278 - 24244 - g 71 -9.2 -3.44848 | opp_overlap 24268, overlap 24242 TCTGGGCAGCAAATA CCTGATCCTCCAGAAC TTT GCTCTGGGGGATACGG TCCCGCTGTTCCCGT lspA 24161 - 24655 + | lipoprotein signal peptidase TERM 38 24715 - 24660 - f 100 -24.4 -4.68451 | gap 1, overlap 24662 AAAAACAATAATAAA TCCTGCCGGATGCGGCCTACAGATT GCTACAA AATC-GTAGGCCGCATCCGGCAAAA ATCCTCAAAAATAAG TERM 39 24713 - 24662 - f 100 -24.8 -2.60006 | gap 1, overlap 24660 AAACAATAATAAATC CTGCCGGATGCGGCCTACAGATT GCTACAA AATC-GTAGGCCGCATCCGGCAA AAATCCTCAAAAATA TERM 40 24819 - 24796 - g 88 -11 -4.14243 | opp_overlap 24796 CACTTCACGCTAAAA CTCGACGATG GCAC CACCGCCGAG TCTACTCGCAACAAC slpA 24742 - 25191 + | FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) ispH 25193 - 26143 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 41 26191 - 26172 - f 79 -9.3 -4.15453 | opp_overlap 26172 26189 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGAAGAAA TERM 42 26172 - 26191 + F 100 -9.3 -5.24129 | opp_overlap 26172, overlap 26189 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGAAGAAA yaaF 26209 - 27123 + | ribonucleoside hydrolase RihC dapB 27290 - 28111 + | dihydrodipicolinate reductase TERM 43 28167 - 28185 + F 79 -3.1 -5.32396 | opp_overlap 28167 TTTATTAATTATAAA GGGCT TTAATTTTT AGCCC TTTTATTTTTGGTGT TERM 44 29503 - 29475 - g 73 -3.7 -4.84761 | overlap 29476 29499 AGATGTGGAGAAAAA CGTGGTGATGATC ACC GCCCAGAACCACG GTTTTGCGGTGGATG carA 28567 - 29715 + | carbamoyl phosphate synthase small subunit TERM 45 32317 - 32298 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC AAAAGTGGCGGCGCG carB 29733 - 32954 + | carbamoyl phosphate synthase large subunit TERM 46 33008 - 33027 + F 100 -10 -6.07627 | opp_overlap 33008 33006 ATCGAATAACTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTTTGCCCAT caiF 33216 - 33611 + | DNA-binding transcriptional activator CaiF TERM 47 33720 - 33742 + T 79 -8.4 -4.33165 | overlap 33735 TAGGCGTCACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTTCCTCCATTTGC caiE 34308 - 33697 - | carnitine operon protein CaiE caiD 35186 - 34293 - | carnitinyl-CoA dehydratase caiC 36755 - 35187 - | putative crotonobetaine/carnitine-CoA ligase TERM 48 35818 - 35799 - G 70 -10 -3.19003 | opp_overlap 35811, overlap 35788 ATAAGACGTCAGCAA GCGAACGC CGAA GCGTTCAC AAAATGCGTCTTTTT TERM 49 36644 - 36670 + g 75 -7.2 -4.38712 | ACCGGTTAACGACTC CGCCGCTGGATT CAC AAATCAGCGCCG TTTTATGACCGTAAA caiB 38031 - 36814 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 50 38067 - 38096 + r 100 -15.7 -3.21695 | opp_overlap 38084, overlap 38062 38076 ATGTAGCGCATGACT GCCGGATGCGGCG TAAA CGCCTTATCCGGC TTACATTCGTGCTCC caiA 39302 - 38160 - | crotonobetainyl-CoA dehydrogenase TERM 51 38440 - 38456 + g 73 -3.6 -4.7497 | overlap 38441 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 40847 - 39333 - | L-carnitine/gamma-butyrobetaine antiporter TERM 52 40797 - 40825 + g 87 -4.5 -5.30339 | GACGATTATTAATGG CGGAAAGAAAACC TTC GGTTCTATTCCCG TTTTTCTCTTTTCAT TERM 53 40987 - 41002 + H 89 -6.2 -5.28942 | CAATAAGCTGTATTC TGTGAT TGGT ATCACA TTTTTGTTTCGAGTG fixA 41203 - 41973 + | putative electron transfer flavoprotein FixA fixC 42980 - 44266 + | putative oxidoreductase FixC fixX 44263 - 44550 + | putative ferredoxin TERM 54 45066 - 45084 + G 77 -12.4 -2.80113 | CCGCGATGTGGTATG TCGGCGCG ACC TGCGCCGA TCTGGTCGGCTACTG yaaU 44609 - 46003 + | putative transport protein yabF 46051 - 46581 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 55 47553 - 47543 - g 75 -6.8 -4.42062 | opp_overlap 47543 47542 47546 CAGGTGCCAAATAAA CAGC GTC GCTG GTTTGCGGTGTTGTT kefC 46574 - 48436 + | glutathione-regulated potassium-efflux system protein KefC folA 48627 - 49106 + | dihydrofolate reductase TERM 56 49130 - 49164 + T 82 -12.1 -3.322 | opp_overlap 49123 49120, overlap 49131 AGAATTTACGGCTAG TGCCGGATGCGACGC CGGTC GCGTCTTATCCGGCC TTCCTGTATCAGGCT TERM 57 49131 - 49163 + T 90 -15.6 -2.58999 | opp_overlap 49123 49120, overlap 49130 GAATTTACGGCTAGT GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC CTTCCTGTATCAGGC apaH 50026 - 49184 - | diadenosine tetraphosphatase apaG 50410 - 50033 - | ApaG TERM 58 50121 - 50142 + g 72 -8.7 -3.71527 | gap 1, overlap 50134 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 59 50212 - 50194 - G 76 -11 -3.30124 | opp_overlap 50194 50180 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 51234 - 50413 - | dimethyladenosine transferase pdxA 52220 - 51231 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 60 52086 - 52069 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG surA 53506 - 52220 - | peptidyl-prolyl cis-trans isomerase SurA imp 55913 - 53559 - | organic solvent tolerance protein TERM 61 55411 - 55434 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 55401 55411, overlap 55401 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCGCCACGTTGT TERM 62 56303 - 56289 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 63 56306 - 56326 + G 74 -3.1 -5.00884 | opp_overlap 56308, overlap 56314 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 56168 - 56983 + | DNA-J like membrane chaperone protein TERM 64 57036 - 56992 - T 72 -9.1 -3.6512 | opp_overlap 57010 57012, overlap 57007 57009 57010 TAAATAAGTTTTAAA CTGTAGGCCTGATAAGACGCG GCC CGCGTCGCATCAGGCAATCGG CGCACAATTGCCGGA TERM 65 57021 - 57007 - T 79 -11.4 -3.30124 | opp_overlap 57010 57012, overlap 56992 57009 57010 CTGTAGGCCTGATAA GACGCG GCC CGCGTC GCATCAGGCAATCGG TERM 66 57066 - 57009 - T 71 -9.8 -3.21924 | gap 1, opp_overlap 57010 57012, overlap 57007 56992 57010 57044 GTAGGCCTGATAAGA CGCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GCC TTATCCGCCTACCGA TERM 67 57065 - 57010 - T 80 -13.3 -2.5294 | gap 1, opp_overlap 57010 57012, overlap 57007 56992 57009 57044 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG TERM 68 57010 - 57065 + T 73 -11.1 -2.58544 | gap 1, opp_overlap 57007 56992 57010 57009 57044, overlap 57012 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG yabO 57759 - 57100 - | 23S rRNA/tRNA pseudouridine synthase A TERM 69 57492 - 57528 + g 72 -8.6 -3.72576 | gap 1, overlap 57494 GCTTTTTCGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC TERM 70 57719 - 57695 - G 95 -13.7 -3.29273 | opp_overlap 57717, overlap 57693 57717 TTGACCACCATAATA TGGTCATCCTG ATA CAGGATAACCA ACCAGGGTTCCTGCG hepA 60677 - 57771 - | ATP-dependent helicase HepA TERM 71 57820 - 57832 + g 76 -9.1 -3.77219 | TCCAGACGCCAACCT GCCTG ATC CAGGC TTTCCATTACCTGCT TERM 72 59539 - 59563 + g 70 -10 -3.16944 | overlap 59537 AGCGGCTCGATATCC TGCTCGCCGA TCATC TCGCCGAGCA TGTTCAGTTCGTCAT polB 63193 - 60842 - | DNA polymerase II TERM 73 60908 - 60897 - G 77 -5.8 -4.64676 | overlap 60898 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 74 63214 - 63234 + r 76 -8.3 -4.14598 | opp_overlap 63214 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC TERM 75 63234 - 63214 - R 100 -8.3 -5.19261 | opp_overlap 63214 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC araD 63963 - 63268 - | L-ribulose-5-phosphate 4-epimerase TERM 76 64023 - 64056 + r 70 -9.5 -3.05816 | opp_overlap 64033 64035 64036, overlap 64045 64046 AAATCGCAGCGCGTA GGCCTGATAAGACGC GCCA GCGTCGCATCAGGCG TTGAATGCCGGATGC TERM 77 64045 - 64073 + r 80 -9.5 -3.9941 | opp_overlap 64033 64036 64035, overlap 64023 64046 TAAGACGCGCCAGCG TCGCATCAGGCGT TGA ATGCCGGATGCGC TTTGCTTATCCGGCC TERM 78 64046 - 64072 + r 82 -13 -2.99325 | opp_overlap 64036 64035, overlap 64023 64045 AAGACGCGCCAGCGT CGCATCAGGCGT TGA ATGCCGGATGCG CTTTGCTTATCCGGC araA 65665 - 64163 - | L-arabinose isomerase araB 67376 - 65676 - | ribulokinase TERM 79 65991 - 66015 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTGACGGCGATC TERM 80 66738 - 66715 - G 72 -5.3 -4.49958 | gap 2, opp_overlap 66718, overlap 66717 AGCTCATCAAAGAAA CTGGCTGGCGG CAAG CCGCC--CCAG CTTTCGTGCCACAGA TERM 81 67485 - 67471 - H 82 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGC ATAGCA AAGTGTGACGCCGTG araC 67715 - 68593 + | DNA-binding transcriptional regulator AraC TERM 82 69217 - 69236 + G 76 -4.2 -4.92314 | overlap 69219 GCGAGTTTAAATGGT TGCTGCTG GCGA CGGCGGTA TTTTTGTGGGTTGGT yabI 68679 - 69443 + | hypothetical protein thiQ 70255 - 69557 - | thiamine transporter ATP-binding subunit thiP 71849 - 70239 - | thiamine transporter membrane protein TERM 83 70329 - 70317 - G 78 -10.5 -3.48036 | TAGTAGCAGAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA TERM 84 70695 - 70683 - G 77 -6.9 -4.49314 | GAGCAGTAAAAAGAA GCCGG TAG CCAGC ACAATCCCCGGCATG TERM 85 71338 - 71305 - G 81 -4.3 -5.10029 | opp_overlap 71330, overlap 71306 ACGAAGCGGAAAAAA TGCCAGCCGCGCATC CCAA GCTGGGCGGCAAGCT GACGTTGTTCGCCGG tbpA 72808 - 71825 - | thiamine transporter substrate binding subunit TERM 86 72672 - 72682 + g 91 -5.4 -5.32699 | overlap 72675 TCGCAGTTACAGTTG GCTT CAA AAGC TTTTTTGATCTTTGG yabN 74627 - 72972 - | transcriptional regulator SgrR TERM 87 74098 - 74086 - G 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGATATTTGCTGCC TERM 88 74893 - 74913 + H 100 -9.7 -6.17268 | GTGTAAAATCACCCG CCAGCAGAT TAT ACCTGCTGG TTTTTTTTATTCTCG yabM 74949 - 76127 + | putative transport protein TERM 89 76168 - 76149 - T 100 -15 -3.64599 | GGACGATAGCGGAAA GCCCGGTC ATTT GACCGGGC AAGGGGTCTAATTCA leuD 76781 - 76176 - | isopropylmalate isomerase small subunit TERM 90 76612 - 76622 + g 72 -4.6 -4.72272 | overlap 76617 ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCGAGAAA leuC 78192 - 76792 - | isopropylmalate isomerase large subunit TERM 91 77711 - 77723 + g 82 -9.1 -4.19624 | ATGGTCTTCGCACGG CCCTG TTT CAGGG TTTGTGTTGCCAGTA leuB 79286 - 78195 - | 3-isopropylmalate dehydrogenase leuA 80857 - 79286 - | 2-isopropylmalate synthase TERM 92 79991 - 80002 + g 72 -5.8 -4.41616 | AGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 93 80707 - 80697 - G 72 -6.8 -4.19817 | TGCACCGATTCAAAA TCGC CCG GCGA AGAGACGGGGAAACC TERM 94 80908 - 80925 + r 100 -14.1 -5.65927 | opp_overlap 80908 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG TERM 95 80925 - 80908 - R 100 -14.1 -5.60993 | opp_overlap 80908 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG leuL 81036 - 80950 - | leu operon leader peptide TERM 96 81995 - 82005 + G 70 -6.8 -4.07568 | GTACAAAATGAATTG CCTG GTT CAGG TTTTGAACCCGCGAG leuO 81695 - 82639 + | leucine transcriptional activator TERM 97 82645 - 82684 + F 100 -19.6 -5.49234 | opp_overlap 82645 82652, overlap 82678 CAAACGCTAACTGAA TGCAGAATAGGCCAGACA TGAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 98 82684 - 82645 - f 100 -15.2 -3.1996 | opp_overlap 82645 82678, overlap 82652 CAAACGCTAACTGAA TGCAGAATAGGCCAGACA TGAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 99 82678 - 82703 + F 71 -3.4 -4.79955 | opp_overlap 82645 82701, overlap 82645 TGAATGTCTGGTTTA TTCTGCATTT TTTATT GAATGTAGAA TTTTATTCTGAATGT TERM 100 82803 - 82819 + F 72 -5.1 -4.68612 | opp_overlap 82803 TTATTATCAATTTAA TCCTTCG TAA TGGAGGA TTTTATCGTTTCTTT TERM 101 82916 - 82928 + F 83 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCGTCAAAC TERM 102 84270 - 84260 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 82957 - 84681 + | acetolactate synthase 3 catalytic subunit ilvH 84684 - 85175 + | acetolactate synthase 3 regulatory subunit TERM 103 85202 - 85222 + G 100 -9.7 -5.41143 | AGTGCGCAATTTGCA GCCCAACAT GTC ACGTTGGGC TTTTTTTGCGAAATC fruL 85188 - 85274 + | fruR leader peptide fruR 85356 - 86360 + | DNA-binding transcriptional regulator FruR TERM 104 86406 - 86375 - f 100 -13.8 -5.06816 | gap 1 ATCCGCGAACAAAAA TACGCGCCAG-GTGA ATT TCCCTCTGGCGCGTA GAGTACGGGACTGGA S0078 86483 - 86758 + | IS1 orfA S0079 86677 - 87180 + | IS1 orfB yabB 87739 - 88197 + | cell division protein MraZ TERM 105 88438 - 88466 + G 76 -12.4 -2.63073 | overlap 88437 CCACGGACCTTTCTC CGCGCTGGGCGA ATACG TTGCCGAGCGCG ATCTTATTGGCAAGA TERM 106 88532 - 88543 + G 70 -3.6 -4.61873 | CCGCAACTTGATGAT GCTG AACG CGGC TTTTCCTTTATGCGC mraW 88199 - 89140 + | S-adenosyl-methyltransferase MraW TERM 107 89461 - 89448 - g 76 -8.1 -4.18494 | opp_overlap 89447 89445 GATCGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 89137 - 89502 + | cell division protein FtsL TERM 108 89565 - 89585 + G 78 -7.6 -4.37734 | opp_overlap 89565 89563 89566, overlap 89566 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 109 91084 - 91105 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 91053, overlap 91087 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 110 91087 - 91102 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 91053, overlap 91084 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 111 91143 - 91161 + G 73 -11.6 -2.67171 | opp_overlap 91140 91137, overlap 91140 91142 91141 91157 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 89518 - 91284 + | penicillin-binding protein 3; peptidoglycan synthetase TERM 112 91759 - 91741 - g 72 -5.2 -4.53303 | opp_overlap 91743, overlap 91743 GATCCCGACAGAAAA TACTACCG GTT CGGCAGTT GATGTTCAGCATGAG TERM 113 91757 - 91743 - g 72 -7.8 -3.87627 | opp_overlap 91743, overlap 91741 TCCCGACAGAAAATA CTACCG GTT CGGCAG TTGATGTTCAGCATG TERM 114 92382 - 92372 - g 81 -6.8 -4.62783 | overlap 92373 GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGCCTGCACTG murE 91271 - 92758 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 115 93195 - 93156 - g 75 -11.4 -3.07443 | opp_overlap 93164, overlap 93165 TTATACGGCAGGCAA TCTCAACAACGACATCGG TGTA CCGATGACGCTGTTGCGC TTAACGCCGGAATAC TERM 116 93186 - 93165 - g 77 -10.1 -3.6849 | opp_overlap 93164, overlap 93156 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG CTGTTGCGCTTAACG TERM 117 93953 - 93935 - g 70 -5.2 -4.42806 | opp_overlap 93949, overlap 93939 GCATGGGTAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 92755 - 94113 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 118 94700 - 94722 + G 74 -9.9 -3.5241 | gap 1, opp_overlap 94682, overlap 94698 GACCGATGGTCTTGA CGGTCTGGCA ATTA TGCC-GACCG TATTTGTCGCCGGTG mraY 94107 - 95189 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 119 95271 - 95291 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA murD 95192 - 96508 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 96508 - 97752 + | cell division protein FtsW TERM 120 98257 - 98272 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 97749 - 98816 + | N-acetylglucosaminyl transferase murC 98870 - 100345 + | UDP-N-acetylmuramate--L-alanine ligase ddl 100338 - 101258 + | D-alanine--D-alanine ligase ftsQ 101260 - 102090 + | cell division protein FtsQ ftsA 102087 - 103349 + | cell division protein FtsA ftsZ 103410 - 104561 + | cell division protein FtsZ lpxC 104662 - 105579 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 121 105606 - 105649 + F 100 -4.5 -6.17292 | opp_overlap 105606 105618 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT yacA 105810 - 106322 + | SecA regulator SecM TERM 122 108159 - 108172 + G 75 -4.5 -4.8622 | opp_overlap 108159 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC TERM 123 108984 - 108944 - g 74 -8.9 -3.96327 | AGCGTTTAGCACAAA TGCAGCAGCTTAGCCATCA GGA TGACGACTCTGCAGCCGCA GCTGCACTGGCGGCG secA 106384 - 109089 + | preprotein translocase subunit SecA TERM 124 109128 - 109111 - f 100 -12.7 -4.42639 | opp_overlap 109111 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 125 109111 - 109128 + F 100 -12.7 -5.33866 | opp_overlap 109111 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 126 109376 - 109359 - g 70 -4.1 -4.62069 | overlap 109361 TCGCTATTTGAAAAA CTGGAAT ATGA ATTCCCG GACAGGCATATAACT mutT 109149 - 109538 + | nucleoside triphosphate pyrophosphohydrolase TERM 127 109539 - 109568 + T 76 -12.1 -2.72144 | opp_overlap 109548 109549, overlap 109538 109549 CTTAAGCGTCTGTAG GTCGGATAAGGCG TTCA CGCCGCATCCGAC ATTTGCACAAGATGC S0099 109687 - 109553 - | hypothetical protein TERM 128 109614 - 109582 - GT 76 -12 -2.53449 | opp_overlap 109549 109591, overlap 109549 109581 109579 ACATTTGCACAAGAT GCCTGATGCGACGC TGTCC GCGTCTTATCAGGC CTACGTGAGGCATCA yacG 109835 - 109638 - | zinc-binding protein yacF 110588 - 109845 - | hypothetical protein TERM 129 110200 - 110190 - G 70 -6.8 -4.08485 | TGTAGGTAAATCAAA GCTG CAA CAGC CGCCTGGGATGCTCA coaE 111208 - 110588 - | dephospho-CoA kinase TERM 130 111181 - 111146 - G 100 -13.4 -3.81951 | overlap 111147 TCCGAGATCAGCAAA CGCATTGGCAACGGTA CTCT TACCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 131 111180 - 111147 - G 100 -16.9 -2.88849 | overlap 111146 CCGAGATCAGCAAAC GCATTGGCAACGGTA CTCT TACCACTGCCAATGC CTCCCGTTAAGGCAA S0104 112503 - 112396 - | hypothetical protein guaC 111433 - 112476 + | guanosine 5'-monophosphate oxidoreductase TERM 132 112485 - 112510 + gT 100 -16.2 -3.32963 | CCTGTAATCTCCCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATCCCACT hofC 113713 - 112511 - | type IV pilin biogenesis protein TERM 133 113183 - 113169 - G 73 -4.2 -4.77165 | TCCGGCAGAACAAAA TGCAGC ATT GCCACA ACCACCATGATTGCC TERM 134 113797 - 113821 + r 72 -9.2 -3.55622 | opp_overlap 113794 TTTTCAAAAAGCGTA CGCATACCCG CCTGT CGGGCGTGCG TTTCCAGCGATTCAA ppdD 115300 - 114860 - | putative major pilin subunit TERM 135 115253 - 115240 - G 72 -6.7 -4.15453 | CAATGGAGCTTAAAA TGGCA ATGA TGCCA ATAACCACCATCAGT nadC 116396 - 115503 - | quinolinate phosphoribosyltransferase ampD 116484 - 117035 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 117032 - 117886 + | regulatory protein AmpE TERM 136 117921 - 117893 - T 71 -10.2 -2.69151 | overlap 117890 TTGGTGTAGAGATTA TTGCCCTCACCC TGTAC GGGTGAGGGCGT AGAGAGATTAATGCG aroP 119302 - 117929 - | aromatic amino acid transporter pdhR 119843 - 120607 + | transcriptional regulator PdhR TERM 137 120728 - 120681 - f 73 -11.4 -2.70979 | opp_overlap 120698, overlap 120677 120678 120684 CGGTAACTAAACGTA GAACCTGTCTTATTGAGCTTTC TGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 138 120987 - 120975 - g 78 -9.1 -3.9461 | opp_overlap 120974 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG TERM 139 121204 - 121219 + G 75 -11.8 -2.96695 | overlap 121199 121201 AGGGCCACATCTCCC CGGGCG TTTA CGCCCG TGCTTTCCTGGAAGG aceE 120768 - 123431 + | pyruvate dehydrogenase subunit E1 aceF 123446 - 125326 + | dihydrolipoamide acetyltransferase TERM 140 125354 - 125333 - f 95 -11.5 -4.43477 | opp_overlap 125335, overlap 125335 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 141 125335 - 125352 + F 100 -14.1 -5.32882 | opp_overlap 125333 125335 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 142 125352 - 125335 - f 100 -14.1 -3.82321 | opp_overlap 125335, overlap 125333 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 143 126515 - 126487 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGTT lpdA 125651 - 127075 + | dihydrolipoamide dehydrogenase TERM 144 127110 - 127076 - f 72 -9.4 -3.62255 | opp_overlap 127066 GCGAAGAAGAAGTAA TTTTTCGTTTGCCGGA ACA TCCGGCAATTAAAAAA GCGGCTAACCACGCC TERM 145 127127 - 127111 - f 85 -6.5 -5.26875 | opp_overlap 127111 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC TERM 146 127111 - 127127 + F 91 -6.5 -5.50499 | opp_overlap 127111 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC TERM 147 127298 - 127283 - f 72 -4.7 -4.56597 | CTTTCTCCCGAAAAA CCTGA CGTTGT TCAGG TGATGCCGATTGTAT TERM 148 127344 - 127364 + F 71 -3.9 -4.8622 | overlap 127347 ATCACGTTGCTGTTG GTTCAGTGG GCG CTGCTGTAC TTTTTCCTTAAACAC TERM 149 129128 - 129116 - f 71 -7.7 -3.86897 | GGGATTCGTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 150 129471 - 129460 - g 77 -7.2 -4.57837 | overlap 129461 129462 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT TERM 151 131551 - 131537 - g 72 -7.8 -3.87815 | CTGGATGCGCACAAA GGTCAG TTG CCGACC CGCCTGTGGGTGGCA acnB 129353 - 131950 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 152 132011 - 131986 - f 93 -12.7 -3.66897 | gap 1, opp_overlap 131986, overlap 131978 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA TERM 153 131986 - 132011 + F 100 -12.7 -5.72622 | gap 1, opp_overlap 131986 131978 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA yacL 132125 - 132487 + | hypothetical protein TERM 154 132520 - 132493 - T 100 -17.8 -4.59982 | GCAGAAGTAAATAAA TCTGGCGGAGCC TGGG AGCTCCGCCAGA GCCGTTAAACAGCTG speD 133319 - 132525 - | S-adenosylmethionine decarboxylase speE 134201 - 133335 - | spermidine synthase TERM 155 134283 - 134258 - R 74 -10.5 -3.24255 | opp_overlap 134258 134260, overlap 134251 134260 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 156 134281 - 134260 - R 77 -10.9 -3.17362 | opp_overlap 134258 134260, overlap 134258 134251 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 134777 - 134307 - | hypothetical protein TERM 157 134774 - 134784 + g 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 158 136205 - 136193 - g 70 -5.5 -4.3739 | overlap 136200 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGGCTCATCGCGCG yacK 134820 - 136370 + | multicopper oxidase TERM 159 136412 - 136389 - T 82 -11 -3.57462 | opp_overlap 136386 136391, overlap 136391 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTATTTCACAT TERM 160 136410 - 136391 - T 90 -13.6 -3.36515 | opp_overlap 136386 136391, overlap 136389 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC TERM 161 136391 - 136410 + T 93 -13.6 -3.65135 | opp_overlap 136391 136389, overlap 136386 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC gcd 138807 - 136417 - | glucose dehydrogenase TERM 162 137968 - 137978 + g 78 -8.2 -4.15328 | overlap 137969 137975 ATCCGCCATCACTTC CGGC GAA GCCG TTTCTGCTTTGGCTT TERM 163 138936 - 138948 + H 71 -6.9 -4.1822 | TTTTACTGGTATACT GCGCG TCT TGCGC TTTGTTGCGGTGCCA hpt 139013 - 139549 + | hypoxanthine-guanine phosphoribosyltransferase TERM 164 139553 - 139586 + T 79 -3.1 -5.4182 | gap 1, overlap 139556 139557 CTGGACGAGTAAGTG TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA TTTTTATTTGTGGTT yadF 140252 - 139590 - | carbonic anhydrase TERM 165 140875 - 140891 + G 70 -3.5 -4.60924 | TGGATATTGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA yadG 140361 - 141287 + | putative ATP-binding component of a transport system yadH 141284 - 142054 + | hypothetical protein TERM 166 142061 - 142090 + F 95 -12.9 -4.10657 | overlap 142062 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT CGGGGGAGAGGAG TTTTGACGGCTATCA TERM 167 142062 - 142089 + F 85 -14.2 -3.06073 | overlap 142061 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT CGGGGGAGAGGA GTTTTGACGGCTATC yadI 142159 - 142599 + | putative PTS enzyme II B component yadE 142663 - 143892 + | hypothetical protein panD 144276 - 143896 - | aspartate alpha-decarboxylase TERM 168 143975 - 143959 - G 73 -9.4 -3.63744 | opp_overlap 143943 143969, overlap 143957 GTCGCCTTCAAAATA GGCGAC ATTGG GTCGCC AGGTGCGAGCTTCTT TERM 169 144323 - 144309 - H 79 -11.4 -3.33696 | opp_overlap 144309 CCTGTCGTTAACGAA GCAGGC GGT GCCTGC TTTGAGGAAATTCTC TERM 170 144309 - 144323 + H 82 -11.4 -3.56099 | opp_overlap 144309 CCTGTCGTTAACGAA GCAGGC GGT GCCTGC TTTGAGGAAATTCTC yadD 144550 - 145452 + | hypothetical protein TERM 171 145521 - 145491 - T 86 -12 -3.51232 | opp_overlap 145494, overlap 145494 CGTGGGGTAAATTAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AGTATTACGCCAGCT TERM 172 145518 - 145494 - T 77 -9.3 -3.89354 | opp_overlap 145494, overlap 145491 GGGGTAAATTAATAA CTGGCGCCA TCAGCCG TAGCGCCAG TTAAGTATTACGCCA panC 146377 - 145526 - | pantoate--beta-alanine ligase panB 147183 - 146389 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 173 147256 - 147292 + H 79 -10.8 -3.63694 | opp_overlap 147258 147261, overlap 147257 GGGCAATGATTTATC AATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGAC TTATTAAGGGTAGGT TERM 174 147257 - 147291 + H 87 -14.3 -2.77895 | opp_overlap 147258 147261, overlap 147256 GGCAATGATTTATCA ATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGA CTTATTAAGGGTAGG TERM 175 147290 - 147258 - H 83 -13.4 -3.20435 | opp_overlap 147257 147256, overlap 147261 GCAATGATTTATCAA TTACCGCACCGCCA GATGA TGGCGGTGCGGTGG ACTTATTAAGGGTAG TERM 176 147287 - 147261 - H 100 -19.5 -2.79276 | opp_overlap 147257 147256, overlap 147258 ATGATTTATCAATTA CCGCACCGCCA GATGA TGGCGGTGCGG TGGACTTATTAAGGG S0134 147677 - 147952 + | IS1 orfA S0136 147871 - 148374 + | IS1 orfB TERM 177 148519 - 148497 - T 79 -8 -4.3898 | opp_overlap 148499 ATGATTTTCAGAAAA TATTTATATT CGT AATATAAATA AATTACCATTTGCTT folK 149001 - 148522 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 150416 - 148998 - | poly(A) polymerase I yadB 151351 - 150455 - | glutamyl-Q tRNA(Asp) synthetase TERM 178 150743 - 150733 - G 81 -6.8 -4.65895 | CTTTCCAGCCAAAAA GCTG GTA CAGC GGGATTTGCCTTACT TERM 179 151392 - 151368 - R 85 -5.6 -5.4505 | opp_overlap 151371, overlap 151371 TCTTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 180 151371 - 151389 + r 79 -12.4 -2.79302 | opp_overlap 151371 151368 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT TERM 181 151389 - 151371 - R 100 -11.7 -4.81306 | opp_overlap 151371, overlap 151368 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT dksA 151873 - 151418 - | DnaK transcriptional regulator DksA sfsA 152755 - 152051 - | sugar fermentation stimulation protein A TERM 182 152398 - 152419 + g 85 -8.7 -4.48175 | opp_overlap 152393 152398 GCAACATAAAGTCAA TACGGCTGC GTTC GGAGCCGTA TTTTACTTCGCTTTT TERM 183 152713 - 152703 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC yadP 153309 - 152770 - | hypothetical protein TERM 184 152887 - 152876 - G 72 -7.2 -4.23723 | TAAGACCAGTTAAAA CCCG GCGG CGGG AATGTCACCGCCTCG TERM 185 153138 - 153117 - G 70 -7.3 -4.07568 | opp_overlap 153117 TCCGTCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC TGCGCTCACTTCGCC hrpB 153329 - 155803 + | ATP-dependent RNA helicase HrpB TERM 186 156302 - 156314 + G 78 -9.1 -3.86346 | GGCAAGGTCTGGCAA CTGCC CGC GGCAG TTTATGGCCGAATGG TERM 187 157369 - 157355 - g 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAG mrcB 155999 - 158533 + | penicillin-binding protein 1b TERM 188 158575 - 158549 - f 100 -16.7 -3.61268 | CATCTAAGCGTGAAA TACCGGATGGC GAGTT GCCATCCGGTA AAATAACATCCCATC TERM 189 158658 - 158677 + F 76 -9.2 -3.68662 | GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT fhuA 158753 - 160996 + | ferrichrome outer membrane transporter TERM 190 161007 - 161028 + F 82 -11.5 -3.5774 | overlap 161008 161024 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCA TTTCACAAGTTGGCT TERM 191 161008 - 161027 + F 90 -15 -2.74322 | overlap 161007 161024 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC ATTTCACAAGTTGGC fhuC 161047 - 161844 + | iron-hydroxamate transporter ATP-binding subunit TERM 192 161867 - 161895 + G 88 -11 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGTCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 161844 - 162734 + | iron-hydroxamate transporter substrate-binding subunit TERM 193 162873 - 162887 + G 72 -4.3 -4.66163 | CGCCGGATATTGACG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 162731 - 164713 + | iron-hydroxamate transporter permease subunit TERM 194 164717 - 164743 + T 78 -12.2 -2.58579 | opp_overlap 164701 164719, overlap 164716 CAGAGCCGTTAATAG AATGCCTCGCCC GGT GGGCGAGGCAAA ATTATCACAACTTCG TERM 195 164741 - 164719 - T 100 -19.2 -3.66288 | opp_overlap 164717 164716, overlap 164701 GAGCCGTTAATAGAA TGCCTCGCCC GGT GGGCGAGGCA AAATTATCACAACTT hemL 166028 - 164748 - | glutamate-1-semialdehyde aminotransferase TERM 196 166823 - 166841 + G 81 -4.4 -5.14682 | overlap 166825 CTGGCTGCGGCCTTT AACGCGCC GCT GGCGGGTA TTTTGTTTATTATCG TERM 197 166825 - 166839 + G 72 -7 -4.18024 | overlap 166823 GGCTGCGGCCTTTAA CGCGCC GCT GGCGGG TATTTTGTTTATTAT yadQ 166253 - 167674 + | chloride channel protein TERM 198 167962 - 167948 - g 75 -5.6 -4.68994 | opp_overlap 167948 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 167756 - 168100 + | iron-sulfur cluster insertion protein ErpA TERM 199 168110 - 168138 + T 100 -14.7 -3.68024 | overlap 168112 ATCTAATCTGTTGTT CATGTGCCGGATA AAC TATCCGGCACATC TTCTCTCTTCAACGC TERM 200 168112 - 168136 + T 100 -17.3 -3.41962 | overlap 168110 CTAATCTGTTGTTCA TGTGCCGGATA AAC TATCCGGCACA TCTTCTCTCTTCAAC yadS 168770 - 168147 - | hypothetical protein yadT 169608 - 168808 - | vitamin B12-transporter protein BtuF TERM 201 169591 - 169573 - G 88 -11.7 -3.79419 | overlap 169571 TGGCGCGAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGATTTAGCC pfs 170299 - 169601 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 170383 - 171900 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 202 172361 - 172381 + G 70 -11.1 -2.78216 | opp_overlap 172361 172358, overlap 172358 AGCAACAGAAATTCA TGGCGCTGG GTT CCGGCGTCA TCATTGATGCCGATA htrA 172030 - 173454 + | serine endoprotease TERM 203 173465 - 173488 + T 95 -14.6 -3.52093 | AGTAATCTCCCTCAA CCCCTTCCTG AATA CGGGAAGGGG TTCTCCTTACAATCT TERM 204 174623 - 174639 + T 79 -8.7 -4.27441 | ATGTGCAACCGCTGG CAACGTC AAA GGCGTTG TTTATTCATCGTAAT yaeH 175240 - 174854 - | hypothetical protein TERM 205 175112 - 175126 + g 75 -7.1 -4.40003 | AAACTTAACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA TERM 206 175513 - 175551 + r 77 -11 -3.15996 | opp_overlap 175503 175517 175520 175522, overlap 175511 175520 175522 AATTATTCTGAGCCA GAAAGCATACGGGCAGCA TCA TGCTGCCCGTATATGTAC TCTTAATCGATGGTA TERM 207 175547 - 175517 - R 100 -14.8 -3.92075 | opp_overlap 175513 175511 175520 175522, overlap 175520 175522 ATTCTGAGCCAGAAA GCATACGGGCAGCA TCA TGCTGCCCGTATAT GTACTCTTAATCGAT TERM 208 175520 - 175544 + r 100 -18.7 -3.01637 | opp_overlap 175517 175520 175522, overlap 175513 175511 175522 CTGAGCCAGAAAGCA TACGGGCAGCA TCA TGCTGCCCGTA TATGTACTCTTAATC TERM 209 175544 - 175520 - R 100 -18.7 -3.02745 | opp_overlap 175520 175513 175511 175522, overlap 175517 175522 CTGAGCCAGAAAGCA TACGGGCAGCA TCA TGCTGCCCGTA TATGTACTCTTAATC TERM 210 175522 - 175542 + r 100 -16.9 -3.05727 | opp_overlap 175520 175517 175522, overlap 175520 175513 175511 GAGCCAGAAAGCATA CGGGCAGCA TCA TGCTGCCCG TATATGTACTCTTAA TERM 211 175542 - 175522 - R 100 -16.9 -3.06711 | opp_overlap 175522 175520 175513 175511, overlap 175520 175517 GAGCCAGAAAGCATA CGGGCAGCA TCA TGCTGCCCG TATATGTACTCTTAA dapD 176378 - 175554 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 212 175895 - 175914 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATGCCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC glnD 179081 - 176409 - | PII uridylyl-transferase TERM 213 179136 - 179121 - R 100 -11.8 -5.15634 | opp_overlap 179115 179121 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC TERM 214 179121 - 179136 + r 82 -11.8 -3.4758 | opp_overlap 179121, overlap 179115 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC map 179937 - 179143 - | methionine aminopeptidase TERM 215 179887 - 179897 + g 74 -2.4 -5.15381 | overlap 179876 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 216 180715 - 180704 - g 72 -7.2 -4.24413 | overlap 180701 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 180305 - 181030 + | 30S ribosomal protein S2 TERM 217 181023 - 181011 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCTT TERM 218 181205 - 181225 + F 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 219 181460 - 181444 - g 77 -3 -5.13521 | gap 1, overlap 181445 181448 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 181288 - 182139 + | elongation factor Ts TERM 220 182150 - 182171 + F 100 -13.7 -4.84761 | opp_overlap 182150 182153 CTTAATTATCAAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 221 182171 - 182150 - f 100 -11.5 -4.81083 | opp_overlap 182150, overlap 182153 CTTAATTATCAAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 222 182168 - 182153 - f 82 -11.8 -3.30145 | opp_overlap 182150, overlap 182150 AATTATCAAAAAGGA GCCGCC TGAG GGCGGC TTCTTTTTGTGCCCA pyrH 182286 - 183011 + | uridylate kinase frr 183303 - 183860 + | ribosome recycling factor TERM 223 183860 - 183840 - f 76 -8.3 -4.14627 | opp_overlap 183840 183841 183843, overlap 183841 183843 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 224 183840 - 183860 + F 76 -8.3 -4.15044 | opp_overlap 183840 183841 183843, overlap 183841 183843 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 225 183841 - 183859 + F 78 -11.8 -3.08812 | opp_overlap 183840 183841 183843, overlap 183840 183843 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 226 183859 - 183841 - f 78 -11.8 -3.08294 | opp_overlap 183841 183840 183843, overlap 183840 183843 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 227 183873 - 183921 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 183879, overlap 183874 183879 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 228 183874 - 183920 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 183879, overlap 183873 183879 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 229 183879 - 183915 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 183879, overlap 183874 183873 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 230 183915 - 183879 - f 100 -13 -4.98255 | gap 1, opp_overlap 183874 183873 183879 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 231 184401 - 184417 + G 70 -3.7 -4.64657 | ATTGTTACCGGTCGA TAGCG AACATAA CGCTA TTTTTCAGAGTTTAC yaeM 183952 - 185148 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 232 185253 - 185270 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG yaeS 185334 - 186095 + | undecaprenyl pyrophosphate synthase cdsA 186108 - 186965 + | CDP-diglyceride synthase yaeL 186977 - 188329 + | zinc metallopeptidase TERM 233 188868 - 188857 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 234 189564 - 189596 + G 71 -10.5 -2.8547 | opp_overlap 189568, overlap 189568 TGTCGATACCGATAC CCAACGTGTTCCGGG TAG CCCGGACCAGGTTGA TGTAGTCTACAAGGT TERM 235 189568 - 189592 + G 72 -9.9 -3.31269 | opp_overlap 189568, overlap 189564 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAGG TTGATGTAGTCTACA TERM 236 189592 - 189568 - g 70 -9.9 -3.14026 | opp_overlap 189568 189564 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAGG TTGATGTAGTCTACA yaeT 188359 - 190791 + | outer membrane protein assembly factor YaeT TERM 237 190890 - 190873 - f 71 -7.7 -3.96216 | overlap 190874 GGGCCACGCAAAGAA CTGCACC CTCC GGTGCAA ATGGGATGGTAAGGA TERM 238 191375 - 191347 - g 80 -11.8 -3.28712 | overlap 191333 191332 191363 CGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 190913 - 191398 + | periplasmic chaperone TERM 239 191480 - 191455 - g 82 -13.3 -2.97245 | opp_overlap 191453, overlap 191450 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 191402 - 192427 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 240 192454 - 192491 + F 95 -12.7 -4.07515 | overlap 192456 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 241 192456 - 192489 + F 90 -13.1 -3.60967 | overlap 192454 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 192532 - 192987 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 192991 - 193779 + | UDP-N-acetylglucosamine acyltransferase TERM 242 193813 - 193834 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG lpxB 193779 - 194927 + | lipid-A-disaccharide synthase TERM 243 195091 - 195080 - g 81 -7.2 -4.67011 | opp_overlap 195079 AAGCTGAGCGAAAAA CGCC GTCT GGCG CTCTATGAAGAGATC rnhB 194924 - 195520 + | ribonuclease HII dnaE 195557 - 199039 + | DNA polymerase III subunit alpha TERM 244 199205 - 199191 - g 74 -2.8 -5.00616 | GTCTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 199052 - 200011 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 245 200032 - 200049 + F 100 -9.1 -5.24129 | opp_overlap 200032 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 246 200049 - 200032 - f 80 -6.9 -4.61527 | opp_overlap 200032 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG ldcC 200110 - 202251 + | lysine decarboxylase 2 yaeR 202308 - 202697 + | hypothetical protein TERM 247 202717 - 202737 + F 83 -13.3 -3.24925 | TGTCATCGCCGCATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT tilS 202762 - 204060 + | tRNA(Ile)-lysidine synthetase TERM 248 204099 - 204067 - T 93 -12 -3.76952 | overlap 204087 CTTAGTTAAGTGAAA GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC GAAAGTCAATCAGGA yaeO 204369 - 204109 - | Rho-binding antiterminator TERM 249 204393 - 204406 + H 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 250 205017 - 205004 - g 78 -8.1 -4.34737 | opp_overlap 205013, overlap 205006 CGACGAATTAAGAAA GCCTG CACC CAGGC CGCAGAAGTGGCGCT yaeQ 204722 - 205267 + | hypothetical protein yaeJ 205264 - 205686 + | hypothetical protein cutF 205700 - 206410 + | lipoprotein involved with copper homeostasis and adhesion TERM 251 206510 - 206541 + T 87 -10 -4.36914 | opp_overlap 206520, overlap 206511 TAGCACGATTTTGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTTGTGCACGAGGC TERM 252 206511 - 206540 + T 83 -13.5 -3.21934 | opp_overlap 206520, overlap 206510 AGCACGATTTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTTGTGCACGAGG yaeF 207389 - 206565 - | hypothetical protein TERM 253 207412 - 207432 + r 87 -11.1 -3.89346 | opp_overlap 207412 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC TERM 254 207432 - 207412 - R 100 -13.3 -5.10497 | opp_overlap 207412 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 209160 - 207442 - | prolyl-tRNA synthetase TERM 255 209208 - 209190 - R 79 -11 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA yaeB 209978 - 209271 - | hypothetical protein TERM 256 209825 - 209850 + g 83 -12.6 -3.29829 | gap 1 AATGGCTGAATGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGAAGCTATG TERM 257 209875 - 209887 + g 70 -4.7 -4.57073 | overlap 209876 GCTATGAGATGCAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 210379 - 209975 - | outer membrane lipoprotein TERM 258 210243 - 210253 + g 74 -8.2 -3.92659 | overlap 210236 210247 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 259 210464 - 210436 - R 74 -6 -4.58663 | gap 1, opp_overlap 210437, overlap 210439 210442 AGGAGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 260 210462 - 210439 - R 90 -14.6 -3.23975 | opp_overlap 210437, overlap 210436 210442 AGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 261 210459 - 210442 - R 93 -12.7 -3.75505 | opp_overlap 210437, overlap 210439 210436 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 211312 - 210497 - | DL-methionine transporter substrate-binding subunit yaeE 212005 - 211352 - | DL-methionine transporter permease subunit TERM 262 211945 - 211934 - G 79 -2.2 -5.24449 | CACAAACCCAAAAAA TCCG GATA CGAA GGTCATTGCCAGCGT metN 213029 - 211998 - | DL-methionine transporter ATP-binding subunit TERM 263 212319 - 212329 + g 77 -8.2 -4.13767 | overlap 212327 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA yaeD 213217 - 213792 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 264 213943 - 213929 - f 86 -4.2 -5.47159 | opp_overlap 213929, overlap 213930 213937 GTTGAAGAGAAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAATAG TERM 265 213942 - 213930 - f 71 -7.7 -3.87211 | opp_overlap 213929, overlap 213929 213937 TTGAAGAGAAAAAAT CCTGA AAT TCAGG GTTGACTCTGAAATA TERM 266 216021 - 215984 - f 93 -6.3 -5.68438 | opp_overlap 215986 216001, overlap 215986 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 267 215986 - 216019 + F 75 -6.7 -4.49756 | opp_overlap 215984 215986, overlap 216001 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 268 216019 - 215986 - f 86 -8.9 -4.47052 | opp_overlap 215986 216001, overlap 215984 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 269 216084 - 216060 - f 71 -8 -3.93061 | gap 1, opp_overlap 216067 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 270 216638 - 216626 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 271 219127 - 219106 - f 74 -8.7 -3.91196 | CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTAGC TERM 272 219401 - 219420 + F 86 -4.2 -5.50499 | opp_overlap 219401, overlap 219403 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGATG TTTTTTTGCGTCTGG TERM 273 219403 - 219418 + F 72 -5.4 -4.38666 | opp_overlap 219401, overlap 219401 ACTTATTAAGAAGCC TCGAGT TAAC GCTCGA TGTTTTTTTGCGTCT TERM 274 220315 - 220286 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 219551 - 220354 + | 2,5-diketo-D-gluconate reductase B TERM 275 220382 - 220411 + T 89 -9.3 -4.59109 | opp_overlap 220383, overlap 220384 GCTCCTCCGGGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 276 220410 - 220383 - T 81 -12.8 -3.14132 | opp_overlap 220382 220384 CTCCTCCGGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 277 220384 - 220409 + T 100 -16.3 -3.90762 | opp_overlap 220383, overlap 220382 TCCTCCGGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S0201 221721 - 220393 - | IS4 orf TERM 278 221729 - 221754 + r 72 -9.1 -3.61398 | opp_overlap 221729 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 279 221754 - 221729 - R 100 -9.8 -5.61596 | opp_overlap 221729 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC yafC 222703 - 221789 - | putative transcriptional regulator LYSR-type TERM 280 222914 - 222895 - H 82 -11.4 -3.54771 | opp_overlap 222879, overlap 222878 CCTATAACAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTAATAGAGG TERM 281 223010 - 222986 - g 72 -9.9 -3.28924 | opp_overlap 222985 222981 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 282 223609 - 223632 + G 82 -3.1 -5.18371 | overlap 223603 223604 223609 223607 CGATGATCAGCGCCG TCGGGCG TTTGGCCGCC CGCTCGA TTTTGTTTTCTACCG yafD 222944 - 223744 + | hypothetical protein TERM 283 223765 - 223790 + F 70 -4.7 -4.46212 | gap 1, opp_overlap 223749 223776 223777, overlap 223750 223749 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGTCC TTTTATACTCAAACA yafE 223972 - 224592 + | putative biotin synthesis protein TERM 284 224601 - 224621 + T 79 -4.6 -5.25699 | opp_overlap 224601 GGCATAAATAAAAAA GGCACCGG GGGAA TCGGTACC TTTTTATTATCTGGT TERM 285 224621 - 224601 - T 93 -6.1 -5.72622 | opp_overlap 224601 GGCATAAATAAAAAA GGCACCG GGGGAAT CGGTACC TTTTTATTATCTGGT dniR 225986 - 224640 - | membrane-bound lytic murein transglycosylase D TERM 286 225327 - 225364 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 225336, overlap 225336 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 287 225336 - 225356 + g 70 -4.6 -4.46669 | opp_overlap 225336, overlap 225327 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 226813 - 226058 - | hydroxyacylglutathione hydrolase TERM 288 226439 - 226427 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT yafS 226844 - 227569 + | hypothetical protein rnhA 228033 - 227566 - | ribonuclease H TERM 289 228815 - 228803 - g 87 -4.7 -5.24129 | CTGGTGCAGAAAAAA GGCGG AAG CTGCC TCTGGCGGGCATAAA dnaQ 228098 - 228829 + | DNA polymerase III subunit epsilon TERM 290 229044 - 229081 + T 95 -11.6 -4.26903 | gap 2, opp_overlap 229050, overlap 229045 229050 CGTTCCGCCAATATT C-A-GAAAGCCCGAATCA GTAA TGATTCGGGCTTTCGTCG TTTTGGTGAAGTGAG TERM 291 229045 - 229078 + T 100 -16.9 -3.13772 | opp_overlap 229050, overlap 229044 229050 GTTCCGCCAATATTC AGAAAGCCCGAATCA GTAA TGATTCGGGCTTTCG TCGTTTTGGTGAAGT TERM 292 229073 - 229050 - T 100 -15.4 -3.9777 | opp_overlap 229050 229045 229044 GCCAATATTCAGAAA GCCCGAATCA GTAA TGATTCGGGC TTTCGTCGTTTTGGT TERM 293 229050 - 229073 + T 100 -15.4 -3.93659 | opp_overlap 229050, overlap 229045 229044 GCCAATATTCAGAAA GCCCGAATCA GTAA TGATTCGGGC TTTCGTCGTTTTGGT TERM 294 229162 - 229137 - T 100 -9.9 -5.11613 | gap 1, opp_overlap 229137 229136 ATATGATTTAAAAAA TGGCCAGACATT ATA AAT-TCTGGCCA CTTCTGTTACTCCAG safA 230215 - 229169 - | putative cytoplasmic protein S0212 230339 - 230226 - | hypothetical protein safB 230788 - 230483 - | periplasmic chaperone of fimbral assembly machinery safC 232668 - 230785 - | outer membrane usher protein TERM 295 231196 - 231167 - G 77 -7.2 -4.53034 | gap 1, overlap 231173 GGCAGATAATTAAAA GATAAC-TGGCGG ATCAA CCGCCATGCCATC TCACGTTCAGCCATC TERM 296 231431 - 231451 + g 70 -4.5 -4.46212 | CCCGTATAGGGGGTA CGGGTGCCG TAA CGGCGGGCG TTTTCTGATAAGCGG TERM 297 231481 - 231463 - G 80 -11.6 -3.28712 | GGCGTTTTCTGATAA GCGGCGGG GCT CCCGGCGC AGGGAAAAATAACGT TERM 298 232214 - 232234 + g 75 -11.8 -3.08679 | overlap 232216 GCAGGCATATCCGGT GGCGCGGC GGTCA GTCGCGCC TCTTCGATGGCGAGC S0215 233178 - 232684 - | putative cytoplasmic protein sat1 234005 - 233373 - | putative cytoplasmic protein sat2 234369 - 233992 - | putative cytoplasmic protein S0219 234906 - 234607 - | putative cytoplasmic protein S0220 234959 - 235369 + | insertion sequence 2 OrfA protein S0221 235327 - 236232 + | insertion element IS2 transposase InsD S0223 236654 - 236956 + | IS911 orfA TERM 299 237062 - 237042 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 300 237414 - 237403 - g 77 -5.8 -4.63218 | opp_overlap 237408 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG S0224 236983 - 237822 + | IS911 orfB TERM 301 237872 - 237855 - T 100 -10.5 -5.06414 | TTGTTGCAATAAAAA GCCCCGC GAAT GCGAGGC TAAATCCTGGTGTTT S0229 238780 - 238511 - | putative endolysin R of prophage CP-933V S0230 239415 - 239101 - | hypothetical protein TERM 302 239150 - 239171 + g 100 -13.7 -3.85817 | ATTTTTATGGTATAC CGCGCCTCT GAAC AGGGGCGCG TTTCTGGCAACAGCT S0231 239635 - 239420 - | lysis protein S TERM 303 239719 - 239706 - H 100 -9.5 -5.46706 | ATTTGAAAAGAAAAA CCCGC AAAA GCGGG CGAAACGATATATAC S0232 239992 - 240366 + | hypothetical protein S0233 240797 - 240390 - | hypothetical protein S0234 241633 - 240794 - | IS911 orfB S0235 241846 - 240794 - | IS911 orfA TERM 304 241202 - 241213 + g 77 -5.8 -4.63218 | opp_overlap 241198 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 305 241554 - 241574 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG S0236 242170 - 242730 + | putative terminase large subunit TERM 306 243014 - 243000 - gf 72 -5 -4.56597 | GCCGCTTCGCAAAAA TGATGC GCG ACATCA AAAAACCAAAAGAGA S0237 242699 - 243073 + | putative terminase large subunit TERM 307 243401 - 243387 - g 70 -10 -3.22102 | overlap 243385 ATATGCGCCATAACA CGGCAA AGA TTGCCG TTAACGTTGGCGTTC S0238 243074 - 245239 + | putative packaging glycoprotein TERM 308 245936 - 245917 - g 81 -8.6 -4.4017 | gap 1, overlap 245919 CTAATCCTGAGAAAA CA-CGCCAG TTG CTGGCGATG GACGGGCAATCCGCG TERM 309 245933 - 245919 - g 88 -11.4 -3.80535 | overlap 245917 AATCCTGAGAAAACA CGCCAG TTG CTGGCG ATGGACGGGCAATCC S0239 245253 - 246164 + | putative scaffolding protein TERM 310 246249 - 246229 - g 72 -9.7 -3.31322 | overlap 246230 CGGAACCGTCCAGAA CCTGACGCC AAT GGCGTCAAA AGTGACAAAATACCC TERM 311 247169 - 247133 - g 72 -6 -4.42386 | gap 1, opp_overlap 247136, overlap 247136 GCGTCACTGACAAAA GAAGAGAAG-GCTTACG CTAA CGTAAACACCTCTCTTG CTGATACCACTCCGG TERM 312 247166 - 247136 - g 78 -7.7 -4.33182 | gap 1, opp_overlap 247136, overlap 247133 TCACTGACAAAAGAA GAGAAG-GCTTACG CTAA CGTAAACACCTCTC TTGCTGATACCACTC S0240 246164 - 247459 + | putative coat protein TERM 313 247467 - 247484 + F 85 -6.9 -4.96848 | opp_overlap 247468, overlap 247468 CCGCGTGATAACCAG AGGGAGC TTCG GCTCCCG TTTTTATCTGGAGAC TERM 314 247468 - 247483 + F 79 -10.4 -3.57627 | opp_overlap 247468, overlap 247467 CGCGTGATAACCAGA GGGAGC TTCG GCTCCC GTTTTTATCTGGAGA TERM 315 247483 - 247468 - f 73 -10.4 -2.96274 | opp_overlap 247468 247467 CGCGTGATAACCAGA GGGAGC TTCG GCTCCC GTTTTTATCTGGAGA S0241 247504 - 247734 + | hypothetical protein S0242 247712 - 248212 + | putative DNA stabilization protein S0243 248212 - 249630 + | putative packaged DNA stabilization protein S0244 249630 - 250478 + | putative packaged DNA stabilization protein S0245 250478 - 250933 + | putative head assembly protein S0246 250936 - 251628 + | putative DNA transfer protein S0247 251638 - 252969 + | putative prophage DNA injection protein TERM 316 254110 - 254090 - g 76 -7.6 -4.1891 | CTGCGCCAACAGAAA CATCACCA TTCTC CGGTGATG CCGCTGCAGCAACAA TERM 317 254614 - 254600 - g 81 -7.2 -4.59773 | CTGCAGGTGCAAAAA TTGATG CGC CATCAA CAAGGTCAATGCTCA S0248 252970 - 254700 + | putative DNA transfer protein S0249 254826 - 255152 + | IS629 orfA TERM 318 255467 - 255455 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC S0250 255387 - 256034 + | IS629 orfB psiF 256423 - 256085 - | hypothetical protein TERM 319 256519 - 256488 - R 100 -14.4 -5.63374 | opp_overlap 256487 256488 256509, overlap 256489 CTAACAGCAAAAAAA CCACCCGGCAGCGA AAAT TCACTGCCGGGCGC AGTTTTATTTCAGCC TERM 320 256518 - 256489 - R 100 -17.9 -3.96398 | opp_overlap 256488 256487 256509, overlap 256488 TAACAGCAAAAAAAC CACCCGGCAGCGA AAAT TCACTGCCGGGCG CAGTTTTATTTCAGC TERM 321 256509 - 256521 + r 76 -4.8 -4.86731 | opp_overlap 256489 256488, overlap 256488 256487 GGCAGCGAAAATTCA CTGC CGGGC GCAG TTTTATTTCAGCCCC phoA 258008 - 256524 - | alkaline phosphatase TERM 322 257696 - 257664 - G 77 -3.3 -5.04385 | GATACCTTTAAAAAA GCCGCCCGCACCT TCGGCAT AATTACGTGCGGC AGTAATTTCCGAATC TERM 323 257997 - 257983 - G 84 -4.2 -5.21459 | overlap 257985 257993 AAAAATAAAAACAAA GCGACT ATA AGTCTC GGCCGTGACAACTTT yaiB 258300 - 258040 - | hypothetical protein TERM 324 258873 - 258863 - g 75 -6.8 -4.42653 | opp_overlap 258862 258863 ATGCCATTGATAAAA GTCG CTT CGAC GTTGTGCTGCTGGGC TERM 325 259658 - 259671 + G 70 -4.5 -4.56597 | GATGCGCAGGCATGG CGCGT GTAG ACGTG TTTTTAACCCCAGAG ddl 258763 - 259857 + | D-alanyl-alanine synthetase A TERM 326 259866 - 259890 + T 93 -10.8 -4.42851 | AATGTAATATTTTAA CGCCCGATAA TATTC TTATTGGGCG TTTTCAGTTTCTTCA S0255 260225 - 259881 - | hypothetical protein TERM 327 260411 - 260439 + G 77 -8.2 -4.13711 | gap 1, overlap 260414 ATCGCAATGCCTCTT CAACGCCT-GGCA ACAT TGCCTATGCGTTG TTTGTGCTGTTTTGC TERM 328 260580 - 260592 + G 74 -6.2 -4.57569 | TGTCGGCACCATTTT CGGG CTGAT CCCG TTTTTAGCAGGCTGC S0256 260353 - 260661 + | hypothetical protein yaiW 261814 - 260720 - | hypothetical protein sbmA 263047 - 261827 - | transport protein TERM 329 264549 - 264522 - g 75 -11.4 -3.07816 | gap 1 TGGTGACCGAGCTAA GCGGGAATAAACC GTT GGTT-ATCCCCGC ATCCTGATTAATACT yaiH 263399 - 264556 + | beta-lactamase/D-alanine carboxypeptidase TERM 330 264566 - 264602 + T 86 -11.8 -3.55866 | gap 1, opp_overlap 264577, overlap 264570 TCCTGATTAATACTC TGAAGGCAAAC-GGTTG ATAG CGACCAGTTTGCCTTTA TTCATTTCGATATAG TERM 331 264570 - 264598 + T 93 -10.4 -4.40298 | gap 1, opp_overlap 264577, overlap 264566 GATTAATACTCTGAA GGCAAAC-GGTTG ATAG CGACCAGTTTGCC TTTATTCATTTCGAT TERM 332 265078 - 265107 + T 100 -18.1 -3.78409 | opp_overlap 265081, overlap 265081 GCGCGTCCTTTGCAG TAATGCCCGTCAA ATCC TTGACGGGCATTA TTTAGATTAAATTAC TERM 333 265104 - 265081 - T 100 -15.4 -3.14132 | opp_overlap 265078 265081 CGTCCTTTGCAGTAA TGCCCGTCAA ATCC TTGACGGGCA TTATTTAGATTAAAT TERM 334 265081 - 265104 + T 100 -15.4 -4.01381 | opp_overlap 265081, overlap 265078 CGTCCTTTGCAGTAA TGCCCGTCAA ATCC TTGACGGGCA TTATTTAGATTAAAT S0262 266507 - 265695 - | ISEhe3 orfB S0263 267494 - 266781 - | IS600 orfB is600a 267937 - 267635 - | IS600 orfA yi22_6 269619 - 268714 - | insertion element IS2 transposase InsD yi21_6 269942 - 269577 - | insertion sequence 2 OrfA protein S0269 270487 - 270756 + | hypothetical protein hemB 270893 - 271900 + | delta-aminolevulinic acid dehydratase tauD 272857 - 272006 - | taurine dioxygenase TERM 335 272200 - 272189 - G 86 -5.8 -5.06816 | opp_overlap 272189 ATGGGCGAATAAAAA GCCT AACA AGGC TTCGCTCTCTTTCTC TERM 336 272682 - 272670 - G 81 -9.1 -4.08767 | TGCAGTTCGCCAAAA CGCTG GGC CAGCG CGCGTTGCTGCTGCG tauC 273681 - 272854 - | taurine transporter subunit TERM 337 272953 - 272923 - G 88 -8.2 -4.65933 | CAGTTCTAAAAGAAA GGCGATAATCGCAA TCA CCGCGATCCCCGCC AGTACCACGTCAGTC TERM 338 273020 - 273008 - G 84 -10.5 -3.74749 | ACCATAAATCCTAAA CCGCG TGT CGCGG CAATCAGCTCCGCCG tauB 274445 - 273678 - | taurine transporter ATP-binding subunit TERM 339 274040 - 273999 - G 84 -10.8 -3.71848 | TTCGTCGAGTAATAA CAGCTGGGGATTCGCCGC CAGCGC GCGGGCAATCCCCACCCG CTGACGTTGACCATC TERM 340 274117 - 274138 + g 77 -5.9 -4.61868 | gap 1, overlap 274120 TTTTTCAGCATCTGG TGC-GCGATT TCC AGTCGCTGCA TTTTCTCTATACCTG tauA 275354 - 274458 - | taurine transporter substrate binding subunit S0275 276415 - 275912 - | IS1 orfB S0276 276609 - 276334 - | IS1 orfA TERM 341 276723 - 276733 + H 82 -5.4 -5.19275 | opp_overlap 276723 ATTAATACAACATTA TCTG CGA CAGA TTTTATTTTCTGGAT TERM 342 277235 - 277251 + G 78 -10.9 -3.48395 | opp_overlap 277231 277227 CAAAAATGATATACC TGACCAG GAA CTGGTCA TTGTATCCGAACGGT TERM 343 277403 - 277388 - g 85 -3.3 -5.40072 | GCCTTGTCAAAAAAA TGGTA GATGAA TACCA ACAAAACTCTGGGCA ykgH 276754 - 277422 + | hypothetical protein TERM 344 277551 - 277525 - g 88 -12.4 -3.59979 | opp_overlap 277525 CTTTTTCACTGTAAA TATCCTGGCATT ACT AATGCCTGGATA TTTACAGAAGAGCAG TERM 345 277525 - 277551 + G 86 -12.4 -3.53012 | opp_overlap 277525 CTTTTTCACTGTAAA TATCCTGGCATT ACT AATGCCTGGATA TTTACAGAAGAGCAG S0278 277498 - 277710 + | hypothetical protein ykgG 278360 - 277665 - | putative transporter ykgF 279780 - 278353 - | hypothetical protein TERM 346 279532 - 279552 + g 71 -3.3 -4.83615 | gap 1, opp_overlap 279529 279532 TTTTGCAAAATAGAC GTGACCGC CGTTTT GCG-TCAC TTTTTCTGAGAGCTG ykgE 280510 - 279791 - | putative dehydrogenase subunit S0282 280929 - 281204 + | IS1 orfA S0283 281123 - 281626 + | IS1 orfB TERM 347 281667 - 281654 - f 74 -3.9 -5.05153 | opp_overlap 281654 ACCTGAAAAAACAAA TATTG ATGG CAATA TCATTATACATAAGG TERM 348 283979 - 283990 + G 70 -4.4 -4.58663 | opp_overlap 283969, overlap 283974 GAATATCTGCTGGTA CAGA CCAC TCTG TTTTTACGGGATAAT TERM 349 284663 - 284647 - g 82 -2.2 -5.32882 | opp_overlap 284634 CACCATCACAAAAAA TGATGG TCTTT CCGTCA AACTGGCTCAAACCA rhsG 282704 - 284917 + | putative Rhs-family protein TERM 350 284956 - 284989 + G 81 -6.9 -4.71426 | overlap 284959 TGACCAGCCTTTACC GTATTCAGG-AGGGC TGCTTT GCCCTGCCTGAA-AC TTTTCTTGATCGCAC S0285 284940 - 285140 + | cytoplasmic protein TERM 351 285297 - 285318 + G 81 -8.7 -4.30576 | opp_overlap 285295, overlap 285298 CAAAGGTACTAATGT TGACGCTGA CCAC TCAGCGTCC TTTTGATGATCACAC TERM 352 285298 - 285317 + G 81 -12.2 -3.18024 | opp_overlap 285295, overlap 285297 AAAGGTACTAATGTT GACGCTGA CCAC TCAGCGTC CTTTTGATGATCACA S0286 285197 - 285385 + | putative cytoplasmic protein S0287 285407 - 285814 + | putative Rhs-family protein TERM 353 286428 - 286440 + G 86 -10.5 -3.88001 | TGAATTTGATGACCA CGGCG TCG CGCCG TTACTTTTTATGGAG TERM 354 287827 - 287811 - g 71 -9.3 -3.48024 | overlap 287789 287787 287809 CGGCAGTATCAAATA CCGGCGC GAT GCGCTGG GCAATCCCACCGATA rhsD 285811 - 288099 + | putative Rhs-family protein rhs-like 288096 - 289085 + | putative Rhs-family protein TERM 355 289753 - 289781 + T 83 -4.5 -5.38549 | opp_overlap 289745 289754, overlap 289754 ATAGCAACGATAATA ACCGGAAATTTCT TCC AGATCTTTCCGGC TTTTTATTATTTAAC TERM 356 289780 - 289754 - T 71 -8 -3.90241 | opp_overlap 289753 289754, overlap 289745 TAGCAACGATAATAA CCGGAAATTTCT TCC AGATCTTTCCGG CTTTTTATTATTTAA yafV 290904 - 290134 - | hypothetical protein TERM 357 290617 - 290597 - G 74 -3.1 -4.91109 | overlap 290601 CGCTTATCATAAAAA TGTACCGTG CCG CCCGGCTCA ACCAGCAAAAAGCGG ykfE 291058 - 291531 + | vertebrate C-lysozyme inhibitor TERM 358 291565 - 291548 - T 100 -12.7 -4.56367 | opp_overlap 291548 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG TERM 359 291548 - 291565 + T 93 -12.7 -3.73068 | opp_overlap 291548 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG fadE 294018 - 291574 - | acyl-CoA dehydrogenase TERM 360 293052 - 293066 + g 73 -11.4 -2.73364 | opp_overlap 293050 GGCGACGACCAATTT CCACGC CCG GCGTGG TGGTTGGGATCAGCG TERM 361 293667 - 293686 + g 70 -4.2 -4.62069 | overlap 293651 CAGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 362 294495 - 294476 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 294476 294477, overlap 294477 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCTATTTCTGACG gmhA 294258 - 294836 + | phosphoheptose isomerase TERM 363 294847 - 294879 + F 73 -9.8 -3.34043 | gap 1, opp_overlap 294838 294857 294858, overlap 294847 294858 AGTAAGTCTGGCGTA G-GCCGGATAAGGCG TTTA CGCCGCATCCGGCAC TTGTGCGCTGATGCC TERM 364 295769 - 295748 - g 74 -8.7 -3.91084 | opp_overlap 295763, overlap 295764 TGACGGGCAATGAAA CCTGGCAAA AAAT TATGCCAGG CGAATGGCGCTTATT yafJ 295042 - 295809 + | putative amidotransferase yafK 296520 - 295780 - | hypothetical protein yafL 296871 - 297425 + | putative lipoprotein yafM 297601 - 298098 + | hypothetical protein fhiA 300054 - 298315 - | flagellar biosynthetic protein FlhA TERM 365 299507 - 299488 - Gf 76 -5 -4.87626 | gap 1 GCTGAACAGCAAAAA CGGCAGATG CGG CATCC-CCG GCACCACCGCCAGCA mbhA 299999 - 300784 + | hypothetical protein dinP 300855 - 301910 + | DNA polymerase IV TERM 366 302152 - 302141 - g 76 -3.6 -4.9934 | ACAAGAGGAGAAAAA GCCC ATAA AGGC GCGCTTTCGTCCAAG yafN 301962 - 302255 + | putative antitoxin of the YafO-YafN toxin-antitoxin system yafO 302258 - 302656 + | putative toxin YafO yafP 302666 - 303118 + | hypothetical protein TERM 367 303334 - 303308 - f 79 -10.3 -3.63515 | opp_overlap 303298 TGTTACTCTCAATAA TTCAAGTCGCA GCACA TGCAACTTGAA GTATGACGAGTCTAT S0304 303364 - 304407 + | hypothetical protein prfH 304523 - 304978 + | peptide chain release factor 2 TERM 368 305127 - 305096 - T 100 -17.3 -3.86776 | TAATGAAGGATGAAA CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG CAAATCAAATAATTA pepD 306597 - 305140 - | aminoacyl-histidine dipeptidase (peptidase D) TERM 369 305259 - 305280 + g 71 -2.2 -5.00616 | opp_overlap 305259 TTGGCCCGATAGAAA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGACC TERM 370 306195 - 306205 + g 72 -6.8 -4.25104 | GCACTTCCAGCGGGC CGTG AAC CACG TTTTCGTCAGCCAGA TERM 371 306578 - 306555 - G 90 -9 -4.57837 | gap 1, opp_overlap 306557 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG gpt 306859 - 307317 + | xanthine-guanine phosphoribosyltransferase TERM 372 307321 - 307351 + F 84 -7.4 -4.74103 | overlap 307324 TCCGGTCGCTAATCT TTTCAACGCCTGGC ATT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 373 307324 - 307348 + F 100 -17.9 -4.47888 | overlap 307321 GGTCGCTAATCTTTT CAACGCCTGGC ATT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 374 307934 - 307957 + G 72 -4.4 -4.70659 | overlap 307935 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 307409 - 308653 + | fermentation/respiration switch protein crl 308711 - 309112 + | DNA-binding transcriptional regulator Crl TERM 375 309144 - 309119 - T 72 -9.1 -3.64822 | gap 1, opp_overlap 309119 309120 309121, overlap 309120 ACGGCGTGAGTGAAA TGTGCCGGATGC ATC ACATCCGGCA-A TATTCATTAAAACTG TERM 376 309144 - 309120 - T 72 -10.7 -2.78679 | opp_overlap 309119 309120 309121, overlap 309119 CGGCGTGAGTGAAAT GTGCCGGATGC ATC ACATCCGGCAA TATTCATTAAAACTG TERM 377 309120 - 309144 + T 71 -10 -3.24329 | opp_overlap 309119 309120, overlap 309119 309121 CGGCGTGAGTGAAAT GTGCCGGATG CATCA CATCCGGCAA TATTCATTAAAACTG TERM 378 309121 - 309143 + T 80 -13.5 -2.54276 | opp_overlap 309119 309120, overlap 309120 309119 GGCGTGAGTGAAATG TGCCGGATG CATCA CATCCGGCA ATATTCATTAAAACT phoE 310206 - 309151 - | outer membrane phosphoporin protein E TERM 379 309748 - 309768 + g 76 -9 -3.79519 | gap 1 GTCGGTGTTCCGATA CGTCGCCAG ACCG CTGGCG-CG TTTGGTCATAAAGTT TERM 380 309913 - 309923 + g 79 -2.4 -5.21709 | TTTCAACCCGGCAAA AGCG AGA CGCG TTTTTTGCTGTGCAG S0311 310382 - 310657 + | IS1 orfA S0312 310576 - 311079 + | IS1 orfB proB 311270 - 312373 + | gamma-glutamyl kinase proA 312385 - 313638 + | gamma-glutamyl phosphate reductase TERM 381 313699 - 313645 - T 88 -8.4 -4.86731 | opp_overlap 313645 313698 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 382 313645 - 313699 + T 72 -8.4 -3.69437 | opp_overlap 313645, overlap 313698 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG S0316 315006 - 313843 - | putative phage integrase TERM 383 314663 - 314678 + g 70 -4.7 -4.48221 | CTCCAGTTTTCCTCA TGACG CCGGTT CGTCA TTTTCTGCATTGCTG S0317 315192 - 315494 + | IS600 orfA S0318 315635 - 316348 + | IS600 orfB S0319 316401 - 317051 + | hypothetical protein TERM 384 317300 - 317284 - gT 73 -3.7 -4.74518 | AATGATGAAAAGAAA TCTGC ACTGATA GCAGA GGCAACGAATGTAAT S4801 316960 - 317421 + | putative phage tail fibre protein TERM 385 318197 - 318231 + T 100 -12.5 -4.37886 | gap 1, opp_overlap 318205, overlap 318197 318199 318205 TATGCGCTATATATC T-ATAAAAAGGCGCAA TTAA TTGCGCCTTTTTATCA TTTTATCAAAAATGG TERM 386 318197 - 318230 + T 86 -14.1 -3.2241 | opp_overlap 318205, overlap 318197 318199 318205 TATGCGCTATATATC TATAAAAAGGCGCAA TTAA TTGCGCCTTTTTATC ATTTTATCAAAAATG TERM 387 318199 - 318228 + T 100 -16.7 -3.1733 | opp_overlap 318205, overlap 318197 318197 318205 TGCGCTATATATCTA TAAAAAGGCGCAA TTAA TTGCGCCTTTTTA TCATTTTATCAAAAA TERM 388 318222 - 318205 - T 100 -11.3 -4.90455 | opp_overlap 318199 318197 318197 318205 ATATATCTATAAAAA GGCGCAA TTAA TTGCGCC TTTTTATCATTTTAT TERM 389 318205 - 318222 + T 100 -11.3 -5.10601 | opp_overlap 318205, overlap 318199 318197 318197 ATATATCTATAAAAA GGCGCAA TTAA TTGCGCC TTTTTATCATTTTAT TERM 390 318277 - 318244 - T 76 -5.3 -4.7373 | gap 1, opp_overlap 318265 TCATTTTATCAAAAA TGGCCCACCGACTGTC CTC GATAGCCAATG-GCCA ATTTTATCTGATACA S4802 319278 - 318229 - | hypothetical protein TERM 391 320884 - 320912 + G 70 -10.4 -3.21595 | gap 1, opp_overlap 320873 320868 ATATTGTGCCGGTTG GCCAGCACT-TAC CGAA GTATGGTGCTGGC TTACTGATGAAAATT S4808 319729 - 320919 + | hypothetical protein TERM 392 321216 - 321202 - T 72 -8.5 -3.68619 | opp_overlap 321199 TGTAAGGTATTTAAA GGGGC ATTCA GCCCC TCCGTCTATTTGTGA gtrII 322769 - 321309 - | putative glucosyl tranferase II TERM 393 321643 - 321668 + g 78 -8.5 -4.2074 | GTTTGAGATGTGTAT GATATTTCTTT AGCT AAAGAGATATC TTTCTGTCTTGCGAG gtrBI 323695 - 322766 - | putative bactoprenol glucosyl transferase gtrAI 324054 - 323692 - | putative flippase S0322 324609 - 324316 - | integrase fragment S0323 325431 - 324718 - | IS600 orfB S0324 325874 - 325572 - | IS600 orfA TERM 394 326403 - 326388 - g 70 -4.7 -4.48221 | CAGCAATGCAGAAAA TGACG AACCGG CGTCA TGAGGAAAACTGGAG S0325 326060 - 327223 + | putative phage integrase TERM 395 327479 - 327446 - f 71 -10.4 -2.60061 | opp_overlap 327446 327440 327448 327452, overlap 327445 327448 327452 ACATTCACAGAAGAG CACAAAGCCTTGCA ATCCAG TGCAAAGCTTGGTG TGTCTCCGTTTTGTT TERM 396 328210 - 328225 + G 75 -4.7 -4.86613 | TTACATGGTTATGAT TAGCG CAATAT CGCTA TTTGTTTTCATTTTA S4804 327572 - 328744 + | hypothetical protein TERM 397 328977 - 328955 - T 79 -9.8 -3.75378 | ATCTGCACAATATAA CCGCTAGCAA CTG CTGCGAGCGG ATGAGAAAAGCTAAC S0326 329988 - 329548 - | IS600 orfB S0327 331349 - 330729 - | IS629 orfB TERM 398 331296 - 331308 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA S0328 331929 - 331711 - | IS629, orfA TERM 399 331992 - 332025 + H 95 -11.7 -3.86944 | CGGTTCAGATAGTGC TAACGGGTGAGCTAC GAAA GTGGCTCACCCGAAA TTTCATACTTCTGCC TERM 400 332481 - 332503 + G 86 -12.7 -3.5241 | overlap 332489 332494 332496 TCTGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 401 332489 - 332505 + G 81 -10.1 -3.87373 | overlap 332481 332494 332496 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG TERM 402 333203 - 333163 - g 95 -9.9 -4.65182 | gap 3 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC GAAAGTCATCAGGAT yaiC 332080 - 333195 + | diguanylate cyclase AdrA proC 334021 - 333212 - | pyrroline-5-carboxylate reductase yaiI 334141 - 334599 + | hypothetical protein TERM 403 334665 - 334681 + F 83 -2.3 -5.64421 | GGGATGTATTGAGAT TTTTACT TTA AGTGGAA TTTTTTCTTTACAAT TERM 404 335022 - 334966 - g 74 -7.7 -4.03234 | opp_overlap 334966 334967, overlap 334967 TTCGCGCCAGAGAAA CGGCGGCGCTGGAAGCGGTAACTGCGG CAT CCACCGTTATCGCTACAGGCGGCGGCA TTATTCTGACGGAAT TERM 405 334967 - 335021 + G 71 -11.2 -2.87146 | opp_overlap 334966 334967, overlap 334966 TCGCGCCAGAGAAAC GGCGGCGCTGGAAGCGGTAACTGCGG CAT CCACCGTTATCGCTACAGGCGGCGGC ATTATTCTGACGGAA aroL 334782 - 335306 + | shikimate kinase II yaiA 335356 - 335547 + | hypothetical protein TERM 406 335610 - 335620 + F 76 -4 -4.94902 | CTGCGTCACATTTTT CATA ATT TATG TTTTTCTAATAATTA aroM 335805 - 336482 + | hypothetical protein yaiE 336554 - 336838 + | hypothetical protein TERM 407 336844 - 336868 + F 80 -6.3 -4.8667 | overlap 336845 336860 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATATC TERM 408 336845 - 336867 + F 75 -9.8 -3.51279 | overlap 336844 336860 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATAT S0336 337047 - 337328 + | hypothetical protein S0337 337325 - 337780 + | hypothetical protein rdgC 338769 - 337858 - | recombination associated protein TERM 409 338319 - 338331 + g 77 -3.3 -5.03314 | overlap 338304 TACGCAGTAATGCCA GCGTA TCT TCCGC TTTTTTGGCACTGGC yajF 338894 - 339787 + | fructokinase TERM 410 339849 - 339807 - T 85 -5.5 -5.30189 | gap 1, opp_overlap 339805 339807, overlap 339811 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCCG-CG TCTTATCAGGCCTAC TERM 411 339807 - 339849 + T 71 -9.9 -3.21924 | gap 1, opp_overlap 339807 339811, overlap 339805 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC-GCG TCTTATCAGGCCTAC TERM 412 339846 - 339811 - T 73 -10.4 -2.949 | opp_overlap 339807 339805, overlap 339807 AGAGTAAAAAACGTA GGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC GCGTCTTATCAGGCC araJ 341126 - 339945 - | protein AraJ TERM 413 340663 - 340653 - G 74 -2.4 -5.14163 | AGCGATCAATAAAAA GGTG TAA CGCC AGCATTCCTGACTTA TERM 414 340722 - 340763 + g 78 -9.4 -3.96337 | gap 1, opp_overlap 340730 340731 340733, overlap 340732 ATTGGCGACTGTCAT CCCGGAAACCATCCCCGCC ACGGC GGCGGTGACT-TTTCCGGG TTTGATAATTTTTGA TERM 415 340818 - 340806 - G 77 -3.3 -5.0538 | overlap 340807 340808 TCCGACGCCAAAAAA TGCGC CAT GCGGA AAGCCGGATACCAGC sbcC 344395 - 341252 - | exonuclease subunit SbcC TERM 416 341602 - 341616 + g 73 -11.4 -2.77962 | overlap 341601 341608 CAACAACCTCGACTT CCAGCG CCT CGCTGG CTTTGCGCTGTAACA TERM 417 342117 - 342148 + g 81 -7.3 -4.60924 | gap 1, opp_overlap 342112 TCGTCAAAGACGCTG GCCTGTAGCGCGGT GTCAA ACTGCGCT-TGGGC TTTTTGCAGACTTTG TERM 418 342906 - 342921 + g 85 -10.4 -4.25848 | GCCTGTAACTGTGCA CGCTGG GCTT CCAGCG TTTTGATGCGCGCTT TERM 419 343549 - 343570 + g 87 -5 -5.29445 | opp_overlap 343549 GTTGTGCCAGACTAA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 345594 - 344392 - | exonuclease subunit SbcD TERM 420 345001 - 345017 + g 70 -6.5 -4.25104 | opp_overlap 345000 344996 345001, overlap 344979 CGTGCCAATATAAAT GTCACGC ACG GCGTCAC TTTTACTGGAACCCA phoB 345784 - 346473 + | transcriptional regulator PhoB phoR 346531 - 347826 + | phosphate regulon sensor protein TERM 421 347853 - 347874 + F 100 -13.1 -4.88918 | opp_overlap 347856 CATCTTTTATTGCCA TAAGCCAGC CGAT GCTGGCTTA TTTTCTTTGCAGTCA TERM 422 347871 - 347856 - f 77 -10.4 -3.31144 | opp_overlap 347853 CTTTTATTGCCATAA GCCAGC CGAT GCTGGC TTATTTTCTTTGCAG TERM 423 348506 - 348518 + G 72 -6.9 -4.18018 | ACGGTTTGTTACCTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 348233 - 349552 + | branched-chain amino-acid transport system II carrier protein TERM 424 349574 - 349597 + F 100 -15.3 -5.64304 | opp_overlap 349577 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 349628 - 351001 + | putative proline-specific permease TERM 425 351018 - 351046 + F 88 -14.6 -3.03338 | opp_overlap 351005, overlap 351008 ACTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT TERM 426 351324 - 351361 + G 83 -12.8 -3.32022 | opp_overlap 351318 351315 GCATAAGCAGCGCAG TCAGCCGCA-GCCAGGCG TCAC CGCATGGCGTGCGGC-GA TTGATCTCTCCAGCG TERM 427 351496 - 351529 + G 82 -3.1 -5.26918 | gap 1, overlap 351497 351523 TTTGCCGTCGATGTA CCTGATAT-CGGCCCA CAA TGGGCTGCGGATCAGA TTTTTTATCAGATCT malZ 351157 - 352974 + | maltodextrin glucosidase TERM 428 353958 - 353942 - g 74 -10.1 -3.53091 | overlap 353951 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGTTGCTGGG TERM 429 354181 - 354161 - g 72 -4.6 -4.70659 | gap 1, opp_overlap 354167 354172, overlap 354162 354163 GTTTATAGCGAAAAA CCGGGC-GC GGTT GCAGCCCCG ACCGCTGGTCTGCAT TERM 430 354172 - 354195 + G 70 -6.6 -4.0896 | opp_overlap 354163 354161 354162, overlap 354167 354181 AAAACCGGGCGCGGT TGCAGCCCCG ACCG CTGGTCTGCA TTTTGACGAGCCTTT TERM 431 354464 - 354454 - g 83 -5.4 -5.02476 | ACAGGCGGCAAAAAA CGAT CTT ATCG AACCGTTCTTTGACG queA 353645 - 354715 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 432 354833 - 354849 + G 70 -5.1 -4.33785 | overlap 354830 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 354770 - 355897 + | queuine tRNA-ribosyltransferase yajC 355920 - 356252 + | preprotein translocase subunit YajC TERM 433 356841 - 356795 - g 73 -3.8 -4.86731 | opp_overlap 356835, overlap 356798 356799 356801 TGTTCGTAAAGAAAA CAACTACG-GCCTGAGCATCAC TTTCC GCGATGCTAAAGCTCGT-GATG AAGCCATTGCGTATC TERM 434 357374 - 357359 - g 71 -9 -3.54029 | CTTCACCAAGGACAA CATCGG CAAA CCGATG GCAACCCTGTTTGTG secD 356280 - 358127 + | preprotein translocase subunit SecD secF 358138 - 359109 + | preprotein translocase subunit SecF TERM 435 359134 - 359153 + F 100 -10 -5.92337 | opp_overlap 359134 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT TERM 436 359153 - 359134 - f 73 -7.8 -4.11216 | opp_overlap 359134 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT yajD 359238 - 359585 + | hypothetical protein TERM 437 359752 - 359732 - T 95 -12.6 -4.14257 | opp_overlap 359732 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA TERM 438 359732 - 359752 + T 95 -12.6 -4.30576 | opp_overlap 359732 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA tsx 360646 - 359762 - | outer membrane protein Tsx yajI 361483 - 360944 - | hypothetical protein TERM 439 361279 - 361322 + g 76 -7.4 -4.29396 | opp_overlap 361295, overlap 361277 361311 361312 CCGGTGTTTTCGCTC CAGGCAGAAGGTAAACCCCA CTGC TGGATTTTGCATTCAGCCTG TTTTGCTGAGTGATT TERM 440 361376 - 361391 + g 71 -9 -3.53018 | overlap 361360 361374 CGTCATCTCCTGGTT CAGCGT GCTG ACGCTG TGTTTCATCTGTCGC ybaD 361634 - 362083 + | transcriptional regulator NrdR ribD 362087 - 363190 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 441 363703 - 363687 - g 70 -6.5 -4.17132 | overlap 363688 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACCGCGCTTGAAAT ribH 363279 - 363749 + | riboflavin synthase subunit beta TERM 442 363903 - 363892 - g 70 -5.8 -4.23723 | opp_overlap 363880 363877, overlap 363882 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 443 364040 - 364015 - g 73 -3.9 -4.87665 | gap 1, overlap 364016 364018 GGCCAGGTAGAAAAA GCAGTACTGCGC ATT GCGCTGTAC-GA ACTGTCTAAACGTAG TERM 444 364038 - 364018 - g 76 -11.1 -3.32986 | overlap 364016 364015 CAGGTAGAAAAAGCA GTACTGCGC ATT GCGCTGTAC GAACTGTCTAAACGT nusB 363769 - 364188 + | transcription antitermination protein NusB TERM 445 364195 - 364235 + F 95 -7.7 -5.43553 | gap 2 AAAAAGTAATATCCA GGCCGGTAGATTCACGGAA GACTG TTCCATG-ATC-GCCGGCC TTTTCTTTTTTACCT TERM 446 364972 - 364985 + G 70 -4.5 -4.47328 | overlap 364973 GCGCACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT TERM 447 365184 - 365204 + G 73 -9 -3.64703 | GGGCTTTGTTTTATT CGTGACGG CGAAC CTGTCACG TTTGACTGGAAAGGA thiL 364266 - 365243 + | thiamine monophosphate kinase TERM 448 365340 - 365360 + G 100 -13.3 -4.04719 | CGTTCCTGGCTCGAT GGGATCGCT GGC GGCGATCCC TTTCTGGTATCTGAT pgpA 365221 - 365739 + | phosphatidylglycerophosphatase A TERM 449 366241 - 366251 + T 85 -6.8 -4.98255 | opp_overlap 366234, overlap 366234 CTGACAAACTGCGCC CAGC AGT GCTG TTTTTGTAGTTCCAG dxs 368684 - 366822 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 450 366995 - 367008 + g 78 -5.2 -4.78237 | CTCCGCTACCTGCGC CGCC CATAAT GGCG TTTTCTTCTACGGTG ispA 369608 - 368709 - | geranyltranstransferase xseB 369850 - 369608 - | exodeoxyribonuclease VII small subunit yajK 370056 - 371504 + | thiamine biosynthesis protein ThiI TERM 451 371518 - 371541 + T 100 -15.4 -3.55444 | AATTTGTAGTTTTTA CGTCGCATCT GGTC AGATGCGACG TTTGCCGCATCCGAC thiJ 372154 - 371558 - | hypothetical protein apbA 373022 - 372111 - | 2-dehydropantoate 2-reductase TERM 452 373116 - 373062 - H 88 -12.5 -3.61398 | gap 2, opp_overlap 373059 373113 373114, overlap 373063 373111 CCGGGTGTTCAATAA GGC-TATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATACGTC CTGGTGCAGGACTGT TERM 453 373113 - 373063 - H 84 -13.7 -2.76696 | opp_overlap 373059, overlap 373062 373111 CGGGTGTTCAATAAG GCTATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATA-C GTCCTGGTGCAGGAC TERM 454 373114 - 373128 + H 73 -10 -3.38135 | opp_overlap 373062 373111, overlap 373113 ACAATTAAGGGATAC GTCCTG GTG CAGGAC TGTTGGTTATTTAAC yajQ 373190 - 373681 + | nucleotide-binding protein TERM 455 373709 - 373726 + T 95 -12.7 -4.1196 | AGCTACTGATTGTCA GGGCCAC CGTG GTGGCCC TTTTGACCATGCATT S4809 375471 - 373741 - | hypothetical protein TERM 456 373938 - 373948 + g 100 -5.4 -5.47218 | AGGTAATGTGTGCCA TGCA TTC TGCA TTTTTTTGCATACAA TERM 457 374177 - 374193 + g 76 -3.7 -4.99972 | AATAGTCCTCTCATT TCACTTT CAG AATGTGA TTTTTGCTCTTTTAT TERM 458 374838 - 374854 + g 82 -2.2 -5.37043 | opp_overlap 374851, overlap 374851 TATTCAGCGCCTTAT CGGCAT AATGA ATGGCG TTTTTTATATCGCCT TERM 459 374851 - 374868 + g 71 -2.6 -4.93877 | opp_overlap 374851, overlap 374838 ATCGGCATAATGAAT GGCGTT TTTTAT ATCGCC TTTTGTTTGATAACC S4810 377677 - 375524 - | hypothetical protein TERM 460 376556 - 376573 + g 74 -9.9 -3.5594 | AACAGAAATTTGTTT TCCGTCT TTAT AGACGGA TTTAGACAGTAACTT S0372 377828 - 378103 + | IS1 orfA S4811 378231 - 378524 + | IS1 orfB S4812 378811 - 378572 - | hypothetical protein S0373 379416 - 379105 - | hypothetical protein TERM 461 379522 - 379546 + r 83 -13.7 -2.62396 | opp_overlap 379524 379526 379528, overlap 379524 379526 379528 TGCTCACTCTGTCAA GAGATACGGTT ATT AGCCGTATCTC TGATCTCAGACAATA TERM 462 379524 - 379544 + r 72 -10.5 -2.85351 | opp_overlap 379524 379526 379528, overlap 379522 379526 379528 CTCACTCTGTCAAGA GATACGGTT ATT AGCCGTATC TCTGATCTCAGACAA TERM 463 379585 - 379560 - R 90 -13.5 -3.50393 | opp_overlap 379566 379578, overlap 379566 TCTGATCTCAGACAA TAAAAAGGTGC CGTA GCACCTTTTTA ATAGAGAGGTTTTGT TERM 464 379579 - 379566 - R 100 -8.1 -5.24796 | opp_overlap 379566 379578, overlap 379560 CTCAGACAATAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG TERM 465 379566 - 379579 + r 84 -8.1 -4.72272 | opp_overlap 379560 379566, overlap 379578 CTCAGACAATAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG cyoE 380487 - 379600 - | protoheme IX farnesyltransferase TERM 466 380411 - 380391 - G 74 -9.7 -3.45386 | overlap 380379 ACAGGGGATAATCAA TGCTGCCCT TTG AGGCCAGCA GGAATCCCCCAATCA cyoD 380831 - 380502 - | cytochrome o ubiquinol oxidase subunit IV cyoC 381445 - 380831 - | cytochrome o ubiquinol oxidase subunit III TERM 467 381158 - 381128 - G 72 -7.5 -4.00042 | opp_overlap 381142 TCCGGCACCAAACAA CCAGGTCAACGCC AGCCA GGAGATAACCTGG CTTTTGTTGTTTTTG TERM 468 381142 - 381159 + g 100 -8.4 -5.18715 | opp_overlap 381128 ACCAGGTCAACGCCA GCCAGG AGATAA CCTGGC TTTTGTTGTTTTTGT TERM 469 381472 - 381499 + r 77 -9.2 -3.85698 | opp_overlap 381479, overlap 381480 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 470 381480 - 381491 + r 78 -5.8 -4.84529 | opp_overlap 381479, overlap 381472 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC S0379 385027 - 383978 - | ISSfl3 orfD S0380 385431 - 385243 - | ISSfl3 orfC S0381 385562 - 385428 - | ISSfl3 orfC S0382 385929 - 385582 - | ISSfl3 orfB S0383 386423 - 385926 - | ISSfl3 orfA TERM 471 386264 - 386252 - G 73 -9.1 -3.62046 | CGATCCGGGCAACAA CAGCC CCA GGCTG TAACGCCTGCTTAGC TERM 472 386604 - 386631 + r 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG TERM 473 386769 - 386749 - R 76 -4.9 -4.90525 | opp_overlap 386752 CAATGCGAAATAAAA CAATTATTT AAC AAATAATTA TCATTAAAGTGACAA TERM 474 386913 - 386959 + r 77 -10.5 -3.38314 | overlap 386912 AAGCGATGCTGATGT TTATTTAGCCGTAATAATTAC GGCGA GTGATTACTACAGCTAAATAA TATTTACAGATTACG ampG 388445 - 386970 - | muropeptide transporter TERM 475 387597 - 387569 - G 72 -11 -3.1012 | overlap 387557 387567 387566 AAATGCCGAAAATCA GCAGCGCCCG GAACAGCGA CAGGCGCTGC ATCAAAATCCCACCG TERM 476 388106 - 388093 - G 75 -4.5 -4.81551 | GAGGCAGAGCAAAAA GCGAT CACC ACCGC CAGCGCCGCCATCCA TERM 477 388284 - 388268 - G 71 -2.9 -4.76892 | overlap 388269 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGAGAGAAGAAACCA yajG 389067 - 388489 - | hypothetical protein bolA 389372 - 389689 + | transcriptional regulator BolA TERM 478 389743 - 389766 + F 93 -9.6 -4.59984 | opp_overlap 389736 389748, overlap 389748 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 479 389748 - 389761 + F 100 -9.5 -5.23292 | opp_overlap 389748, overlap 389743 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 480 389761 - 389748 - f 100 -9.5 -4.74132 | opp_overlap 389748 389743 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 481 389848 - 389833 - f 85 -6.8 -5.055 | overlap 389835 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 482 389846 - 389835 - f 71 -7.2 -4.15235 | overlap 389833 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG tig 390033 - 391331 + | trigger factor TERM 483 391366 - 391389 + F 100 -12.4 -5.9873 | opp_overlap 391366 391365 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA TERM 484 391902 - 391918 + G 70 -5 -4.44667 | ATCTGTATGGGCCAG GCGGCC TCGAT GGGCGC TTTCTTGTTGACCGC clpP 391578 - 392201 + | ATP-dependent Clp protease proteolytic subunit clpX 392327 - 393601 + | ATP-dependent protease ATP-binding subunit TERM 485 393630 - 393658 + F 80 -6.7 -4.88711 | opp_overlap 393635, overlap 393635 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 486 393653 - 393635 - f 93 -8.8 -4.88407 | opp_overlap 393630 393635 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 487 393635 - 393653 + F 91 -11 -4.3623 | opp_overlap 393635, overlap 393630 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 488 394735 - 394722 - g 77 -3.1 -5.10029 | gap 1, overlap 394712 394724 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 489 394740 - 394724 - g 82 -9.4 -4.17355 | overlap 394712 394722 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 490 395082 - 395071 - g 70 -4.4 -4.45485 | opp_overlap 395064 ATGAGATCGACAAAA TGTC TTCT GACA TGCGAGGCGATCCGG TERM 491 395784 - 395772 - g 75 -5.5 -4.72986 | GATTTTTACGAAAAA CGTGA CAT CCACG TCCACGTACCGGAAG lon 393789 - 396143 + | DNA-binding ATP-dependent protease La TERM 492 396208 - 396173 - f 79 -4.6 -5.14163 | opp_overlap 396176, overlap 396175 396176 ATGCACTAATAAAAA CAGGGCTGGCAGGC TAATTCGG GCTTGCCAGCCTTT TTTTGTCTCGCTAAG TERM 493 396206 - 396175 - f 74 -7.2 -4.19587 | opp_overlap 396176, overlap 396173 396176 GCACTAATAAAAACA GGGCTGGCAGGC TAATTCGG GCTTGCCAGCCT TTTTTTGTCTCGCTA TERM 494 396176 - 396205 + F 100 -13.6 -5.72616 | opp_overlap 396175 396173 396176 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT TERM 495 396205 - 396176 - f 73 -10.7 -3.10668 | opp_overlap 396176, overlap 396175 396173 CACTAATAAAAACAG GGCTGGCAGGC TAATTCGG GCTTGCCAGCC TTTTTTTGTCTCGCT hupB 396352 - 396624 + | transcriptional regulator HU subunit beta TERM 496 396660 - 396679 + F 100 -10 -5.7827 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT TERM 497 397554 - 397527 - g 73 -12 -2.5655 | overlap 397526 GTGAGTTACATCAAG CTGGTTGCCGCA ACGA TGCAGCAACCGG TTAGCGATGCGGATA TERM 498 398605 - 398574 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ybaU 396816 - 398687 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 499 398730 - 398757 + F 72 -10.6 -2.93447 | opp_overlap 398731 398736, overlap 398736 GTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 500 398756 - 398731 - f 86 -11.9 -3.63515 | opp_overlap 398730 398736, overlap 398736 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 501 398736 - 398751 + F 81 -8.2 -4.39571 | opp_overlap 398731 398736, overlap 398730 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 502 398751 - 398736 - f 78 -6 -4.89477 | opp_overlap 398736 398730, overlap 398731 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA ybaV 398838 - 399209 + | hypothetical protein TERM 503 399215 - 399228 + F 70 -2.4 -5.0133 | opp_overlap 399215 AACCCTGTAATTAAT TTGC ATAGTG GCAA TTTTTTGCCAGACTG TERM 504 399268 - 399246 - f 74 -10.7 -3.12351 | opp_overlap 399246 399241 399248 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC TERM 505 399246 - 399268 + F 73 -10.7 -2.96274 | opp_overlap 399246, overlap 399241 399248 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC ybaW 399303 - 399701 + | hypothetical protein ybaX 400448 - 399753 - | queuosine biosynthesis protein QueC TERM 506 400488 - 400474 - H 88 -8.6 -4.89477 | GCTTGAACAATAAAA GCGTTA TGG TAACGC CTGCGATTAACCCGG TERM 507 400861 - 400879 + H 73 -2.2 -5.1925 | overlap 400862 400863 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 508 402728 - 402717 - g 95 -5.8 -5.44119 | overlap 402718 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 402293 - 403123 + | hypothetical protein TERM 509 403141 - 403156 + F 100 -11.8 -6.15259 | AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTTTGCGTTG TERM 510 403264 - 403250 - g 72 -4.3 -4.6008 | overlap 403262 AAAATAGAATTAAAA GAGAA AAAAA TTCTC CGTGGAAGGGCTATG TERM 511 403468 - 403455 - g 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG ybaO 403190 - 403735 + | putative LRP-like transcriptional regulator mdlA 403765 - 405537 + | putative multidrug transporter membrane\ATP-binding components mdlB 405530 - 407311 + | putative multidrug transporter membrane\ATP-binding components TERM 512 407348 - 407371 + F 89 -8.9 -4.68645 | opp_overlap 407348 407343 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC glnK 407492 - 407830 + | nitrogen regulatory protein P-II 2 TERM 513 408002 - 408015 + G 70 -5.9 -4.15453 | overlap 408013 TGTTTATGACTATTC CGGGG ATTG CCCTG TTTTACGGTGGGTTG amtB 407860 - 409146 + | ammonium transporter TERM 514 409189 - 409163 - T 100 -11.7 -5.07053 | gap 1, opp_overlap 409163 AAGCACTGCAAAAAA TAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 515 409163 - 409189 + T 100 -11.7 -5.68023 | gap 1, opp_overlap 409163 AAGCACTGCAAAAAA TAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA tesB 410055 - 409195 - | acyl-CoA thioesterase II TERM 516 410085 - 410075 - H 74 -6.8 -4.24342 | overlap 410076 CTCTCCAGTAACAAA GCTG CCG CAGC AAGCCAAAGTGAGTT ybaY 410273 - 410845 + | hypothetical protein TERM 517 410923 - 410948 + F 100 -9.8 -5.61596 | opp_overlap 410923 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 518 410948 - 410923 - f 72 -9.1 -3.61398 | opp_overlap 410923 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT S0405 410956 - 412284 + | IS4 orf TERM 519 412295 - 412266 - T 89 -9.3 -4.59109 | opp_overlap 412267, overlap 412268 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCCGCCCGGAGA TERM 520 412267 - 412294 + T 81 -12.8 -3.14132 | opp_overlap 412266 412268 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCGCCCGGAG TERM 521 412293 - 412268 - T 100 -16.3 -3.90762 | opp_overlap 412267, overlap 412266 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCGCCCGGA ybaZ 412625 - 412314 - | hypothetical protein TERM 522 412707 - 412697 - H 71 -6.8 -4.16016 | GCATTGCGCAAGAAA CCAG CAT CTGG CACGCAATGGGTTGC ybaA 413004 - 413357 + | hypothetical protein ylaB 414949 - 413399 - | hypothetical protein TERM 523 413817 - 413835 + g 80 -5.2 -5.02074 | TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA ylaC 415583 - 415113 - | hypothetical protein TERM 524 415224 - 415210 - G 77 -11.4 -3.13403 | opp_overlap 415201, overlap 415208 TGTTCCTTATGAACA TCCGCG ACA CGCGGA GAGTTCAAGATGGCT hha 416640 - 416422 - | hemolysin expression-modulating protein ybaJ 417040 - 416666 - | hypothetical protein TERM 525 417551 - 417566 + r 79 -11.8 -3.28537 | opp_overlap 417551 GTTATGCATAAAAAA GGCCGC TTAC GCGGCC TTAGTGATTACATGT TERM 526 417566 - 417551 - R 100 -11.8 -5.28176 | opp_overlap 417551 GTTATGCATAAAAAA GGCCGC TTAC GCGGCC TTAGTGATTACATGT acrB 420735 - 417586 - | acriflavine resistance protein TERM 527 418906 - 418927 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 528 420609 - 420648 + g 100 -15.8 -3.57144 | AGGCGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 421951 - 420758 - | acriflavin resistance protein AcrA precursor TERM 529 421922 - 421940 + g 93 -6 -5.17744 | opp_overlap 421918 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 422093 - 422740 + | DNA-binding transcriptional repressor AcrR TERM 530 423163 - 423150 - g 70 -3.7 -4.62783 | overlap 423133 CAGCTACGGCAAAAA GTCGC TGAA GCGCC GGAAAAAATGCGCCA TERM 531 423684 - 423670 - g 79 -4.2 -5.15969 | CTTTAACTGAAAAAA CGGC GCAGGAA GCCG TCTCCCCGGATGAAG aefA 422868 - 426230 + | potassium efflux protein KefA ybaM 426603 - 426442 - | hypothetical protein priC 427144 - 426617 - | primosomal replication protein N'' ybaN 427214 - 427591 + | hypothetical protein apt 427744 - 428295 + | adenine phosphoribosyltransferase TERM 532 428347 - 428371 + F 70 -9.9 -3.09492 | opp_overlap 428296, overlap 428347 428349 428365 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 533 428606 - 428578 - g 72 -5.2 -4.56597 | gap 1, opp_overlap 428547 GTGGCGTCGGAAAAA CCTCTATCGCCCG ACTG CTGGCGA-AGGGG CTAAACTGCGAAACC TERM 534 429660 - 429640 - g 74 -10.4 -3.53224 | overlap 429641 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 535 429741 - 429714 - g 76 -10.5 -3.36112 | gap 1 GCAAAAAAGAGTGAA CCGGCAGC-CGC TACCC GCGCGCGGCCGG TGAATAACGCTGCGC TERM 536 429898 - 429882 - g 75 -4.3 -4.7497 | overlap 429885 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTGAAAAA TERM 537 429895 - 429885 - g 77 -6.8 -4.4831 | overlap 429882 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTGAA TERM 538 429947 - 429934 - g 88 -5.2 -5.27779 | TGGAACATGAAAAAA CGCC GGAACT GGCG GTGAAGCTAGCGGCA TERM 539 430095 - 430053 - g 71 -9.1 -3.56594 | opp_overlap 430062 430068 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 540 430265 - 430248 - g 95 -6.9 -5.17744 | opp_overlap 430245 430248 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 428424 - 430349 + | DNA polymerase III subunits gamma and tau TERM 541 430351 - 430367 + F 77 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC TERM 542 430475 - 430463 - g 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA ybaB 430402 - 430731 + | hypothetical protein TERM 543 430811 - 430767 - g 72 -10.6 -3.07622 | gap 1, overlap 430757 430770 ACACAGCTTATGGAA GCACTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 544 430808 - 430770 - g 81 -13.1 -2.75382 | gap 1, overlap 430767 CAGCTTATGGAAGCA CTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 545 431151 - 431140 - g 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAATC recR 430731 - 431336 + | recombination protein RecR TERM 546 431336 - 431371 + F 72 -10.4 -2.90804 | opp_overlap 431327 431342, overlap 431335 431345 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG AGCA CCTGCTCTCGCTTGAA ATTATTCTCCCTTGT TERM 547 431365 - 431342 - f 100 -16.8 -3.90112 | opp_overlap 431336 431335 431345, overlap 431327 TCGTTTTTAAGCAAA CGAGAGCAGG AGCA CCTGCTCTCG CTTGAAATTATTCTC TERM 548 431345 - 431362 + F 73 -11.3 -2.55818 | opp_overlap 431342, overlap 431336 431335 TTTTTAAGCAAACGA GAGCAGG AGCA CCTGCTC TCGCTTGAAATTATT TERM 549 431907 - 431887 - g 100 -10.5 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAAC GGC GTCTTCTGG GAATCGGCTGGCGAA TERM 550 432572 - 432556 - g 81 -7.3 -4.60487 | overlap 432558 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 551 432570 - 432558 - g 72 -7.7 -3.91506 | overlap 432556 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 431446 - 433320 + | heat shock protein 90 TERM 552 433326 - 433353 + F 100 -15.7 -5.50723 | GGTTTCCTGATGTCA TGCCGGATGAC CTTTGT GTCATCCGGCA TTTTTCTTTTCATCA adk 433501 - 434145 + | adenylate kinase TERM 553 434156 - 434181 + F 82 -11.9 -3.31144 | overlap 434153 GCTAATCAAGCCGCA GCAGATCTGCT TTCG GGCAGGTCTGC TTATCCACCTCAGGC hemH 434277 - 435239 + | ferrochelatase ybaC 436195 - 435377 - | putative lipase TERM 554 437278 - 437257 - g 78 -7.9 -4.37198 | AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG CGCTATAGCGGAATT gsk 436347 - 437651 + | inosine-guanosine kinase TERM 555 437669 - 437700 + T 72 -8.6 -3.71873 | opp_overlap 437679 437680, overlap 437670 437679 437680 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTGGCTCTCGATGC TERM 556 437670 - 437699 + T 77 -12.1 -2.82803 | opp_overlap 437679 437680, overlap 437669 437679 437680 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTGGCTCTCGATG ybaL 439460 - 437784 - | putative cation:proton antiport protein TERM 557 439694 - 439662 - R 87 -10.6 -4.13945 | opp_overlap 439652, overlap 439665 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 558 439691 - 439665 - R 93 -15.3 -3.09831 | opp_overlap 439652, overlap 439662 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT fsr 440918 - 439698 - | fosmidomycin resistance protein TERM 559 440016 - 440004 - G 81 -10.5 -3.66424 | TAAAATCAGCGTAAA CGGCG CAA CGCCG AGGATAGAGCCCCAA TERM 560 440603 - 440584 - G 74 -7.8 -4.10007 | AGAACTGCGCCAAAA CTGCCCGC CAGC GCAAGCAG CACCAGACCACTTAA TERM 561 440884 - 440899 + g 72 -6.8 -4.23045 | gap 1, overlap 440883 440884 GTTGACGCAGCCGCG CCC-GCC ACA GGCTGGG TTTGTTCACTCATTG ushA 441136 - 442788 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 562 442819 - 442796 - T 100 -16.8 -3.67976 | opp_overlap 442789 442794 442792, overlap 442789 GGCAGTAATCCGAAA GTGCCGGATG TTTG CATCCGGCAC AATGCTTAATCGCGG ybaK 443304 - 442825 - | hypothetical protein TERM 563 442963 - 442974 + g 79 -2.2 -5.24129 | GGGGGCGTCGATAAT CGTT GGCA GACG TTTTTTCTGCCCCAG TERM 564 443481 - 443502 + r 90 -7.3 -5.40072 | overlap 443482 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 565 443482 - 443501 + r 83 -10.8 -3.83561 | overlap 443481 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA ybaP 444302 - 443508 - | putative ligase TERM 566 444104 - 444123 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG ybaQ 444386 - 444781 + | hypothetical protein TERM 567 444980 - 444959 - T 75 -10.1 -3.59979 | opp_overlap 444946, overlap 444973 TGCGTCGATGCCAAA TGCGCCGCC CTAA AGCAGCGCA TCCGCAATGACGTAC ybaR 447500 - 444996 - | copper exporting ATPase ybaS 447762 - 448694 + | glutaminase ybaT 448697 - 449989 + | putative amino acid/amine transport protein TERM 568 450157 - 450139 - g 73 -3.8 -4.7497 | GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCCATTCGCTTCTA ybbI 450114 - 450521 + | DNA-binding transcriptional regulator CueR ybbJ 450977 - 450522 - | hypothetical protein ybbK 451894 - 450977 - | putative protease TERM 569 451775 - 451798 + g 72 -9.7 -3.33969 | GAGCCCCGGCTGTAA CGTTTTGGT ATAGCG ACCAAAACG TTCTACCGTCCATTG TERM 570 452679 - 452646 - gH 72 -10.3 -2.76833 | overlap 452645 452648 AAAGACGAAATTAAT CATGCGGATAAAGTG ATTA CACTGCAACCGCATG CCGGAGAAATGCAGG ybbL 452040 - 452717 + | putative ABC transporter ATP-binding protein YbbL ybbM 452677 - 453483 + | putative metal resistance protein TERM 571 453512 - 453481 - T 95 -10.9 -4.4846 | opp_overlap 453486 453489, overlap 453482 CAATTGAAGAAGAAA TGATGCGATGCCG GATGCG CAGCATCGCATCC GGCGTTGTGGTTCAT TERM 572 453511 - 453482 - T 90 -14.4 -3.27992 | opp_overlap 453486 453489, overlap 453481 AATTGAAGAAGAAAT GATGCGATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA TERM 573 453486 - 453519 + T 100 -16.8 -2.81547 | opp_overlap 453482 453481, overlap 453489 GAAGAAGAAATGATG CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA TERM 574 453489 - 453516 + T 95 -14.9 -3.55487 | opp_overlap 453482 453481, overlap 453486 GAAGAAATGATGCGA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC ybbN 454436 - 453546 - | putative thioredoxin-like protein TERM 575 453835 - 453859 + g 70 -10.7 -2.83715 | TTCAGCAGTTCGATT TGCGCTACCAG CCC CTGGTAGCGGG TGTCCTGATCCTGCA ybbO 455270 - 454461 - | short chain dehydrogenase TERM 576 455819 - 455799 - H 77 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCG GCGG-CACG GAAGGTTAACAGGAC TERM 577 456100 - 456129 + G 75 -5.7 -4.72386 | gap 1, opp_overlap 456094 456093 ACGAAGAAGCGCGGG CAAAGTTG-CGCGC GAA GCACGTCGGCTTTG TTTTTCAGTCATTTA ybbA 455853 - 456539 + | putative ABC transporter ATP-binding protein YbbA TERM 578 457016 - 457026 + T 76 -8.2 -4.11484 | opp_overlap 457016 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAACCCCTTCCA TERM 579 457858 - 457871 + T 70 -9.5 -3.08798 | GCTGCCTCTGCGCCT GGCGG TTAG CCGCC TGTTACGTCAGCCGT TERM 580 458860 - 458874 + T 73 -11.4 -2.6999 | overlap 458856 458853 458858 GGATTGTTCTGCCGT GCAGCG GTG CGCTGC TGCTGTCGCTTTTCG TERM 581 459150 - 459126 - T 90 -12.9 -3.53012 | opp_overlap 459126 GTCGGTTTTTTTAAA GGCCGAAGG AGGTAAA CCTTCGGCC TTAGCTACGTTTCCT TERM 582 459126 - 459150 + T 83 -12.9 -3.11999 | opp_overlap 459126 GTCGGTTTTTTTAAA GGCCGAAGG AGGTAAA CCTTCGGCC TTAGCTACGTTTCCT TERM 583 459568 - 459603 + T 74 -10.7 -3.16203 | opp_overlap 459570 459578, overlap 459566 459570 459578 GTCTTGGGCGGAAAA AATAAAAAAACCGAC TGTCAT GTCGGTTTTTTTATA TCTGTATTCTGGTGC TERM 584 459570 - 459601 + T 83 -13.3 -3.13593 | opp_overlap 459570 459578, overlap 459568 459566 459578 CTTGGGCGGAAAAAA TAAAAAAACCGAC TGTCAT GTCGGTTTTTTTA TATCTGTATTCTGGT TERM 585 459601 - 459570 - T 100 -13.3 -5.00616 | opp_overlap 459570 459568 459566 459578, overlap 459578 CTTGGGCGGAAAAAA TAAAAAAACCGAC TGTCAT GTCGGTTTTTTTA TATCTGTATTCTGGT TERM 586 459593 - 459578 - T 100 -6.1 -6.28401 | opp_overlap 459570 459568 459566 459578, overlap 459570 GAAAAAATAAAAAAA CCGAC TGTCAT GTCGG TTTTTTTATATCTGT TERM 587 459578 - 459593 + T 93 -6.1 -5.77988 | opp_overlap 459578 459570, overlap 459570 459568 459566 GAAAAAATAAAAAAA CCGAC TGTCAT GTCGG TTTTTTTATATCTGT TERM 588 459613 - 459623 + T 78 -5.4 -4.77165 | TTTATATCTGTATTC TGGT GCA ACCA TTTTGTTCTCACGAC ybbB 460758 - 459664 - | tRNA 2-selenouridine synthase TERM 589 460138 - 460151 + g 72 -4.5 -4.70879 | opp_overlap 460137 CCACAGGCGCAAATC CTGAC GGGC GTCGG TTTTTAGCATTTCGG ybbS 461753 - 460827 - | DNA-binding transcriptional activator AllS TERM 590 461775 - 461790 + H 73 -4 -4.82819 | gap 1, opp_overlap 461775, overlap 461777 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG ybbT 461983 - 462465 + | ureidoglycolate hydrolase ybbU 462543 - 463358 + | DNA-binding transcriptional repressor AllR TERM 591 463371 - 463388 + F 100 -12.7 -5.40474 | TAGTGTCTGTCGCAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT TERM 592 463428 - 463410 - f 83 -10.4 -3.786 | TGACAAAATTTGAAA GTTGGAAA ATT TTTCCAAC TAATAGAGGTAGGAA gcl 463448 - 465229 + | glyoxylate carboligase gip 465242 - 465523 + | glyoxylate-induced protein S0455 466037 - 465534 - | IS1 orfB S0456 466231 - 465956 - | IS1 orfA ylbA 466931 - 466260 - | hypothetical protein TERM 593 466620 - 466646 + g 77 -10.2 -3.59087 | AAGATAGCCACCTTC GCTTAAGGCAAA TGT TTTGCCTTCGGC TTTGGCAGTGATATT ylbB 468099 - 466942 - | allantoate amidohydrolase TERM 594 468107 - 468092 - G 70 -6.1 -4.21141 | opp_overlap 468092 GGCGAATAAAGTAAA CGGGT CATCCC ACCCG TTGGGTCAGCGCCAA TERM 595 468571 - 468587 + H 81 -5 -5.1615 | ATGGCGCTTTAGATG CGCGCG CCGGT CGCCCG TTTTTTGCCTGTTCC TERM 596 469152 - 469168 + G 82 -7.9 -4.56597 | CGCGCATTGAGGTTT CGCCTGA TGA TCCGGCG TTTTTGCAGCCAGAG arcC 468821 - 469714 + | carbamate kinase purK 470919 - 469852 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 471425 - 470916 - | phosphoribosylaminoimidazole carboxylase catalytic subunit ybbF 472265 - 471543 - | UDP-2,3-diacylglucosamine hydrolase TERM 597 472038 - 472024 - G 74 -6.4 -4.46212 | TTGCCGAGCAGAAAA TCACGG TTG CCATGA ATGAAATAACAGGGA TERM 598 472230 - 472195 - G 100 -12.7 -5.00616 | gap 1, opp_overlap 472204 TCCCCCGCTAAAAAA CGCAGAA-AACCGGCG GTGAT CGCCGGTTCTTCCACG CAGAGATGAAGATCT TERM 599 472204 - 472220 + g 85 -11.5 -3.61398 | opp_overlap 472195 AAAAAACGCAGAAAA CCGGCGG TGA TCGCCGG TTCTTCCACGCAGAG ppiB 472762 - 472268 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 600 472519 - 472529 + g 72 -5.4 -4.58283 | GTGCCATTGCCAGCG TACC ACG GGTA TTTTTCAGGCCGTTG cysS 472936 - 474321 + | cysteinyl-tRNA synthetase TERM 601 474333 - 474356 + T 100 -16.8 -3.46602 | opp_overlap 474323 GTAATTGCGCAATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA ybcI 474866 - 474357 - | hypothetical protein TERM 602 474735 - 474719 - G 78 -5.1 -4.77036 | opp_overlap 474721 CGCGATGACCAAAAA CATTGCC GTA AGCAACG CCAAATTTAAACGAC TERM 603 474965 - 474944 - R 100 -15.9 -3.95836 | AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GAAAGGGATCAGGCA ybcJ 475186 - 474974 - | hypothetical protein folD 476054 - 475188 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 604 475219 - 475233 + g 72 -7.1 -4.18494 | opp_overlap 475217 475221 TCATGATATTCAACG CACGC CTGTA GCGTG TTTTCAATCAGCGTG TERM 605 475453 - 475470 + g 70 -4.1 -4.72272 | AACAGATCGGCATTT TCTACGT GATG ACGCAGA TTTTTAGTGAAGCGG TERM 606 476204 - 476214 + H 73 -4 -4.75372 | TGAGGTCGCTGAGAT TGAA AGC TTCA TTTTTCGTACATGAT TERM 607 476703 - 476715 + G 70 -6.3 -4.23723 | GTCACACTCGGTCAA TATCG TAC CGATA TTTTCAATGCTGTTG sfmA 476502 - 477077 + | putative fimbrial-like protein sfmC 477297 - 477989 + | putative chaperone S0471 479035 - 478532 - | IS1 orfB S0472 479229 - 478954 - | IS1 orfA TERM 608 479579 - 479602 + r 75 -9.6 -3.59262 | overlap 479583 CGGGTTTTCTTGATT CAGACGCGCA GCGG TGTGCGTTTG TTTGCCGCTATAGCG TERM 609 479583 - 479598 + r 77 -6.8 -4.43208 | overlap 479579 TTTTCTTGATTCAGA CGCGCA GCGG TGTGCG TTTGTTTGCCGCTAT TERM 610 479738 - 479708 - R 76 -11.8 -2.60079 | overlap 479718 TGACCGTATAATTCA CGCGATTACACCGC ATT GCGGTATCAACGCG CCCTTAGCTCAGTTG envY 480619 - 479858 - | envelope protein TERM 611 480793 - 480763 - R 86 -11.2 -3.727 | opp_overlap 480775, overlap 480765 CTGACGAGAGCGAAA GAGGTAAGCCAGGT CGT ACCCGACTTACCTG GAGGGGATTTAATAC TERM 612 480791 - 480765 - R 90 -13.8 -3.44487 | opp_overlap 480775, overlap 480763 GACGAGAGCGAAAGA GGTAAGCCAGGT CGT ACCCGACTTACC TGGAGGGGATTTAAT ybcH 481692 - 480802 - | hypothetical protein TERM 613 484211 - 484235 + r 78 -6.4 -4.72272 | gap 2, opp_overlap 484210 484214, overlap 484215 CTTCACTGCGACAAC GCAGGGTCGGCG CAG CGTCG-CCC-GC TTTTTGCTGGGCAAG TERM 614 484546 - 484531 - R 76 -4 -5.05116 | gap 1, opp_overlap 484544, overlap 484533 GGATAAATAACAAAA TG-GCGA TAA TCGCTCA GCCCCAGCTCTTCTG TERM 615 485773 - 485757 - R 70 -5.1 -4.44797 | overlap 485749 CCAGCAACAGCAAAA GCTGG ATCATCA CCAGC ATCGCGAGGAAGCTG ybcZ 488477 - 487035 - | sensor kinase CusS ylcA 489150 - 488467 - | DNA-binding transcriptional activator CusR TERM 616 488681 - 488671 - G 82 -3.2 -5.24531 | overlap 488673 ATGGCGGAGAAAAAA CTCC AGC AGAG TAAATTCTTTACTGG TERM 617 489212 - 489233 + H 72 -6.7 -4.34402 | opp_overlap 489220, overlap 489211 ATGGCAATCGCTTAT TGGCAAAAT GACA ATTTTGTCA TTTTCCTGTCACCGG TERM 618 490200 - 490215 + G 81 -6.8 -4.65838 | overlap 490211 TAATGCTAATATTGG TGCTGC GCGT GCGGCA TTTTTCCCGTCTATC ylcB 489307 - 490689 + | copper/silver efflux system outer membrane protein CusC ylcC 490713 - 491045 + | periplasmic copper-binding protein S0484 491986 - 492309 + | IntA S0485 492969 - 492349 - | IS629 orfB TERM 619 492916 - 492928 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA S0486 493558 - 493232 - | IS629 orfA S0487 495490 - 494699 - | insertion sequence 2 OrfB protein S0488 495972 - 495562 - | insertion sequence 2 OrfA protein TERM 620 496770 - 496782 + G 87 -4.8 -5.19212 | overlap 496760 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTTTGGTGCTGAT ybdE 496745 - 499888 + | putative inner membrane component for iron transport TERM 621 500220 - 500255 + G 84 -11.2 -3.71873 | gap 1, opp_overlap 500231 CAGCTTGGCGAGATG GTGGTCGAA-GAGCCGG TAT CCGGTTCATTTGCCCAC TTTGCCTATAAATAC pheP 499989 - 501365 + | phenylalanine transporter TERM 622 501397 - 501423 + T 100 -16.7 -5.65513 | opp_overlap 501395 501394 501392 CCGACAAAACGATGT CCGCTCTCATC CATTC GATGAGAGCGG TTTTTTTAATTACTG ybdG 502680 - 501433 - | putative transport protein TERM 623 502780 - 502759 - R 82 -11.5 -3.61103 | overlap 502761 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GAGAGAATTACACTT TERM 624 502778 - 502761 - R 90 -14.1 -3.38224 | overlap 502759 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGAGAGAATTACAC nfnB 503441 - 502788 - | dihydropteridine reductase ybdF 503903 - 503535 - | hypothetical protein ybdJ 504216 - 503968 - | hypothetical protein ybdK 505400 - 504282 - | carboxylate-amine ligase TERM 625 504972 - 504959 - G 82 -8.1 -4.49556 | CGTGCAGCAAATAAA TGGCG TCAT CGCCA CTGGCACAGCCAACA TERM 626 505186 - 505176 - G 70 -6.8 -4.09685 | opp_overlap 505179 CTGCATCGCTGAAAA CTGC CCG GCAG CCTGGTTGATATCAC TERM 627 506004 - 505988 - g 76 -3.7 -4.92363 | AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGCGTTAGTGC IS103 505832 - 506353 + | IS103 orf S0498 506350 - 506781 + | IS150 orfB TERM 628 507183 - 507151 - f 100 -13.6 -4.55128 | opp_overlap 507151 AGCCTGAAATTAAAA GGTCTGACTCCAAT TGAAT ATCGGAATCAGACC TATATGCCTCGTGTA TERM 629 507232 - 507272 + F 72 -9.2 -3.65046 | gap 1, overlap 507271 GGGTCAGTACACCCT GGGGCTGCCACTCCAAA CCAGACAA TTTGGA-TGGTAGTCCC TTCTTCGCATGGAGG S0499 507298 - 507450 + | hypothetical protein TERM 630 507451 - 507483 + F 77 -10.6 -3.32963 | gap 1, opp_overlap 507450, overlap 507451 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGGAT TERM 631 507451 - 507482 + F 71 -10.8 -2.59564 | opp_overlap 507450, overlap 507451 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GTAA TCCCCGCATATCCG GTTGTCAGGTCAGGA TERM 632 507522 - 507551 + F 100 -17.9 -4.19735 | ACCTGCTTTACACTT TCGCCCGCGGTCA GTGA TGGCTGCGGGCGA TTTCGTTTTAAGAGC S0500 507702 - 507953 + | hypothetical protein TERM 633 507954 - 507985 + T 71 -10.8 -2.59564 | opp_overlap 507953, overlap 507954 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GTAA TCCCCGCATATCCG GTTGTCAGGTCAGAG TERM 634 507954 - 507986 + T 77 -10.6 -3.32963 | gap 1, opp_overlap 507953, overlap 507954 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGAGT entD 508704 - 508075 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 635 508418 - 508401 - G 73 -9.1 -3.59979 | TCGGTTGACGGGAAA CCACGGC CAAT GCCGTAG CCCCGCAGTGGCTAA TERM 636 508839 - 508810 - R 100 -17.9 -3.30124 | opp_overlap 508807 508804, overlap 508792 TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCGTGAACGAC GCGCACTTTGTCAAC fepA 511110 - 508870 - | outer membrane receptor FepA TERM 637 509233 - 509264 + g 77 -2.9 -5.11836 | gap 1, overlap 509236 TGAGTTCAACGTGTA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 638 510915 - 510928 + g 70 -3.7 -4.64657 | TGATCTCCGACACAT CGCGG GCAA CCGGG TTTTTGCGGATTTCA TERM 639 511618 - 511628 + G 72 -6.8 -4.15044 | ATGCCAACTGGCGCG GCAG CTA CTGC TTTATTCCCACCGAA TERM 640 511725 - 511707 - g 77 -8.2 -4.08692 | GAAGGCTGGCGAAAA CTATTACC CCA GGCAATAG CCGATCCGCTGAATC fes 511353 - 512555 + | enterobactin/ferric enterobactin esterase TERM 641 514203 - 514187 - g 95 -10.1 -4.64144 | overlap 514178 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGCAGATGCGCGT TERM 642 515051 - 515063 + G 70 -6.9 -4.07687 | CGGCGGTAGATGTCA GCTGG TAT CCGGC TTTTGGCGAGGAACT TERM 643 516001 - 516011 + G 78 -8.2 -4.18762 | CTGTTTTGTTTCCAT CCGG CGT CCGG TTTTGCCTGGCAGTT TERM 644 516189 - 516163 - g 81 -12.2 -3.16683 | overlap 516166 ACGCTACTTGAGCAA CAACCGCACGGC ATT GCGGCGCGGCTG CGTGCCCGTGGCGAA TERM 645 516186 - 516166 - g 79 -10.3 -3.7282 | overlap 516163 CTACTTGAGCAACAA CCGCACGGC ATT GCGGCGCGG CTGCGTGCCCGTGGC entF 512773 - 516618 + | enterobactin synthase subunit F S0505 516702 - 516977 + | IS1 orfA S0506 516896 - 517399 + | IS1 orfB TERM 646 517413 - 517439 + T 100 -8.2 -5.85425 | AAGTTGGAGTCATTA CCCATAATTA CAGAAAA TAATTATGGG TTTTTTATTTGTTTG fepC 519555 - 518740 - | iron-enterobactin transporter ATP-binding protein fepG 520544 - 519552 - | iron-enterobactin transporter permease TERM 647 520336 - 520310 - G 95 -10 -4.67353 | overlap 520311 TCAGCGACTGAAAAA TCGCGCCGCTGA CGC CCAGCGCCGCGC CAATCAACAGCGCCA TERM 648 520335 - 520311 - G 89 -13.5 -3.3993 | overlap 520310 CAGCGACTGAAAAAT CGCGCCGCTGA CGC CCAGCGCCGCG CCAATCAACAGCGCC fepD 521557 - 520541 - | iron-enterobactin transporter membrane protein ybdA 521656 - 522888 + | enterobactin exporter EntS fepB 523848 - 522892 - | iron-enterobactin transporter periplasmic binding protein TERM 649 526535 - 526550 + G 71 -3.2 -4.87626 | AGCACAATGCCAGTG CCTTTG ATGC CAACGG TTTTTACTGTTCCGG TERM 650 526920 - 526900 - g 70 -3.9 -4.72201 | overlap 526903 GTCGATAAAAAACAA TTACGTCAG TGG CTGGCGTCA CGCGCATCAGCCTGA entE 525325 - 526935 + | enterobactin synthase subunit E entB 526949 - 527806 + | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase entA 527806 - 528552 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 528555 - 528968 + | hypothetical protein TERM 651 530621 - 530633 + G 72 -6.9 -4.19177 | overlap 530620 GGTAGATGCGGGTAC GCGTG CTG CGCGC TTTATGTTGCAGGAT cstA 529149 - 531254 + | carbon starvation protein ybdH 532731 - 531643 - | hypothetical protein TERM 652 533503 - 533530 + G 72 -6.2 -4.39696 | opp_overlap 533479 AGTGTGCTGGCGCAT CCGCAGCTGC GTGAGCGG GCAGTGGCGG TTTCTTCATTTGGCA TERM 653 533967 - 533995 + G 72 -8.2 -3.81137 | gap 1 GAAGGAATCGACGTT GCTGGCAGCAG CTGAACGC CTGC-GCCAGC TTTAGCTATTTAACC ybdL 532840 - 534000 + | putative aminotransferase S0522 535146 - 534520 - | IS911 orfB TERM 654 534928 - 534939 + g 77 -5.8 -4.63218 | opp_overlap 534924 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S0523 535688 - 535386 - | IS911 orfA S0526 536938 - 537216 + | ISEhe3 orfA S0527 537273 - 538085 + | ISEhe3 orfB TERM 655 538377 - 538393 + T 73 -4.5 -4.86621 | ATAAAGTAAACACTG TAAAGCA GAG TGTTTTA TTTTTCATTCGCGCT dsbG 540312 - 539566 - | disulfide isomerase/thiol-disulfide oxidase TERM 656 540759 - 540737 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 540684 - 541247 + | alkyl hydroperoxide reductase subunit C TERM 657 541385 - 541404 + F 100 -13.6 -4.63218 | AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 658 541536 - 541519 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 541462 - 543057 + | alkyl hydroperoxide reductase, F52a subunit TERM 659 543088 - 543111 + T 100 -13.1 -5.27923 | opp_overlap 543103, overlap 543102 ACCTGCAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATGGCATTA TERM 660 543157 - 543131 - T 100 -18 -4.7373 | opp_overlap 543102 543124 543123, overlap 543103 TTATGGCATTAAAAA GCCCTGCCGGGA TGT TCCAGGCAGGGC GGCATAAATACTTTT ybdQ 543606 - 543178 - | hypothetical protein ybdR 543827 - 545065 + | putative oxidoreductase TERM 661 545261 - 545242 - gT 88 -12.2 -3.53811 | CTGATTTTGCGTAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 545706 - 545296 - | nucleoside diphosphate kinase regulator S0533 545146 - 545607 + | hypothetical protein TERM 662 545786 - 545764 - TR 100 -12.7 -5.11836 | opp_overlap 545764 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 663 545764 - 545786 + Tr 86 -11.2 -3.6608 | opp_overlap 545764 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT rna 546759 - 545935 - | ribonuclease I TERM 664 546719 - 546705 - G 77 -8.5 -4.13872 | overlap 546696 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGGCAGAATG TERM 665 546789 - 546830 + r 73 -7.9 -4.19371 | opp_overlap 546796, overlap 546792 CTATCTATTAAATCA TAAAAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 666 546792 - 546827 + r 70 -9.6 -3.10512 | opp_overlap 546796, overlap 546789 TCTATTAAATCATAA AAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGA TGATTTATTCAGCGT TERM 667 546823 - 546796 - R 100 -18.5 -5.42265 | opp_overlap 546792 546789 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA TERM 668 547835 - 547819 - R 78 -6.5 -4.64598 | opp_overlap 547825, overlap 547790 547820 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 669 547834 - 547820 - R 73 -10 -3.38036 | opp_overlap 547825, overlap 547790 547819 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG citG 549246 - 548368 - | triphosphoribosyl-dephospho-CoA synthase TERM 670 548479 - 548496 + g 77 -6.2 -4.63928 | ATAATCGAGATCGGT GGGGGT TCGAAT GCCCCC TTTTTGCAATAATGT TERM 671 549306 - 549321 + r 83 -10.4 -3.72576 | TGGGTTTTTCCACGC GCGCAG ACGG CTGCGC TTTGCTCGCACAACA citX 549771 - 549283 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase citF 551307 - 549775 - | citrate lyase alpha chain citE 552226 - 551318 - | citrate lyase beta chain (acyl lyase subunit) citD 552519 - 552223 - | citrate lyase subunit gamma citC 553679 - 552534 - | citrate lyase synthetase (citrate (pro-3S)-lyase ligase TERM 672 553278 - 553267 - G 77 -7.2 -4.58395 | opp_overlap 553274, overlap 553269 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT TERM 673 553526 - 553540 + g 100 -2.7 -6.14618 | overlap 553527 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 674 553527 - 553539 + g 70 -6.2 -4.25111 | overlap 553526 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 675 553620 - 553667 + g 77 -2.9 -5.13343 | gap 1, overlap 553621 CCTGAAGGTGCATGT TGTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAACTGATAACC TTTTATTTTCACTTG S0543 554562 - 554059 - | IS1 orfB S0545 554756 - 554481 - | IS1 orfA ybhA 555625 - 556443 + | phosphotransferase TERM 676 556431 - 556451 + T 71 -9.7 -3.2964 | CCAGTTCATTTATAG CCACCTGAT TTA ATCAGGCGG TTATCGACACACTTT modC 557502 - 556444 - | molybdate transporter ATP-binding protein modB 558194 - 557505 - | molybdate ABC transporter permease protein TERM 677 557807 - 557789 - G 79 -4.4 -4.97158 | overlap 557790 TGATAGTAAAGAAAA CGCGCCAG CGC CCGGCACC TAGTGTTCTTGCGGC modA 558967 - 558194 - | molybdate transporter periplasmic protein TERM 678 558342 - 558352 + g 72 -6.8 -4.17491 | GAATCTTCCGGGAAG GTGG CAA CCAC TTTTACCCCTTTGCT TERM 679 559124 - 559107 - R 100 -8.4 -5.35224 | TTGAGAAAAAGAAAA TGCCCG ACTAAG CGGGCA CTCAGGGAATCAATG S0550 559283 - 559134 - | hypothetical protein TERM 680 560110 - 560094 - g 81 -10.9 -3.57462 | TACCCGACGGGCAAA CACTGTG CGC CACAGTG CCGGTAAATGAAGCG modE 559412 - 560200 + | DNA-binding transcriptional regulator ModE TERM 681 560707 - 560732 + G 86 -11.1 -3.90559 | opp_overlap 560699 GAAAAACCCTGCTGT GTCAGGCGCTG ATGT CGGAGCCTGAC TTGTTGATTCTTGAT modF 560268 - 561740 + | putative molybdenum transport ATP-binding protein ModF TERM 682 562513 - 562496 - g 70 -4.1 -4.60041 | gap 1, overlap 562497 562498 ACCGACCTGCAAAAA GC-CCAGC CGG ACTGGAGC ATTGCCCTGCTGCGC TERM 683 562763 - 562748 - g 77 -6.1 -4.65895 | GTGGCGATGGAAAAA CTGGC GAACAA GCCAG GCGTACACATCTACA galE 562001 - 563017 + | UDP-galactose-4-epimerase TERM 684 563240 - 563224 - g 81 -6.5 -4.8667 | overlap 563225 GACAGGCGATAAAAA CCCCGAT TAC ACCGGGA CTTACGTTTTCACTA galT 563027 - 564073 + | galactose-1-phosphate uridylyltransferase galK 564077 - 565225 + | galactokinase galM 565219 - 566259 + | aldose 1-epimerase TERM 685 566266 - 566282 + F 87 -10.1 -4.27467 | GCTGAGTAATGTTAA GCCCTCG TCA TGAGGGC TTTATCTTCATATTG TERM 686 566594 - 566579 - g 74 -6.1 -4.45664 | overlap 566580 GTAAGCGAAGCAAAA GCAGC AGGTAA GCTGC TGAAAGAGGAAGGTT gpmA 566462 - 567214 + | phosphoglyceromutase TERM 687 567241 - 567261 + T 100 -8.3 -5.73978 | opp_overlap 567241 TTAAAAAATGAGAAA GCCGACT GCAAGTG AGTCGGC TTTTTTGTTTGTCGT TERM 688 567261 - 567241 - T 79 -8.3 -4.3179 | opp_overlap 567241 TTAAAAAATGAGAAA GCCGACT GCAAGTG AGTCGGC TTTTTTGTTTGTCGT TERM 689 567296 - 567328 + T 79 -12.7 -2.87136 | opp_overlap 567295 567290, overlap 567305 567306 AACAATGGAGCACAT TGCCTGATGCGACGC TGC GCGTCTTATCAGGCC TGTGGTGATTCATCG TERM 690 567306 - 567318 + T 70 -9.1 -3.30771 | opp_overlap 567295 567290, overlap 567305 567296 CACATTGCCTGATGC GACGC TGC GCGTC TTATCAGGCCTGTGG aroG 568433 - 567381 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 691 568570 - 568558 - H 77 -3.3 -5.16071 | AATTAGCAAGAAAAA CGCCA GAT TGTCG CGAAAAACGAGATCT S0559 568749 - 569129 + | putative homeobox protein TERM 692 569151 - 569170 + F 93 -9.3 -4.78661 | opp_overlap 569151 569150 AAAATAGCCAATAAT GGGAGAG CGGAGT CTCTCCC TTTTAATTTTTCACT TERM 693 569538 - 569549 + G 70 -4.4 -4.53034 | overlap 569526 ATGCCATCGCCCTCG TGGT AATT ACCA TTTTGATTGTCTGGG ybgR 569243 - 570184 + | zinc transporter ZitB TERM 694 570190 - 570220 + T 100 -15.5 -3.15544 | opp_overlap 570186 TCACCATTAATGGGA CAGCGCGCGTGAG CCTCT TTCACGTGCGCTG TTGATCCACATCCGG pnuC 570900 - 570181 - | PnuC protein nadA 571981 - 570938 - | quinolinate synthetase TERM 695 572196 - 572228 + r 100 -15.7 -3.19463 | opp_overlap 572197 572205, overlap 572197 572205 TGAGGATGCCTGAAT AGCAAAAAAGCGCCT TTA GGGCGCTTTTTTGCA TTGGTGGGTCGTGCA TERM 696 572227 - 572197 - R 100 -18.5 -3.03441 | opp_overlap 572196 572197 572205, overlap 572205 GAGGATGCCTGAATA GCAAAAAAGCGCC TTTAG GGCGCTTTTTTGC ATTGGTGGGTCGTGC TERM 697 572197 - 572227 + r 100 -19.2 -2.51464 | opp_overlap 572197 572205, overlap 572196 572205 GAGGATGCCTGAATA GCAAAAAAGCGCCT TTA GGGCGCTTTTTTGC ATTGGTGGGTCGTGC TERM 698 572219 - 572205 - R 100 -8.5 -5.27779 | opp_overlap 572197 572196 572205, overlap 572197 CTGAATAGCAAAAAA GCGCC TTTAG GGCGC TTTTTTGCATTGGTG TERM 699 572205 - 572219 + r 100 -9.2 -5.17576 | opp_overlap 572205 572197, overlap 572197 572196 CTGAATAGCAAAAAA GCGCCT TTA GGGCGC TTTTTTGCATTGGTG TERM 700 572670 - 572685 + r 72 -9 -3.52941 | CTCGCCCTTCGGCGC CGTTGC TGAT GCAACG TTATCCTTCACGTTT TERM 701 572922 - 572957 + r 70 -9.1 -3.4285 | opp_overlap 572926, overlap 572924 GCTTATGATTCGCAC GACACGACCAGAAAT AATGCG ACTTCTGGTCGTGTG TTATGCATTACATCG TERM 702 572924 - 572955 + r 79 -11.7 -3.28368 | opp_overlap 572926, overlap 572922 TTATGATTCGCACGA CACGACCAGAAAT AATGCG ACTTCTGGTCGTG TGTTATGCATTACAT TERM 703 572953 - 572926 - R 72 -10.7 -2.79302 | opp_overlap 572924 572922 ATGATTCGCACGACA CGACCAGAAAT AATGCG ACTTCTGGTCG TGTGTTATGCATTAC ybgF 573756 - 572965 - | hypothetical protein TERM 704 573504 - 573517 + g 70 -5.3 -4.29738 | GCTCCACGACCTGAT TCAGT TGAT ACTGA TTTTCCTGAATCTGA TERM 705 573702 - 573686 - G 100 -15.1 -4.25104 | GGTGCCTGAGCAAAA GCGGCCC AGG GGGCCGC TATACCAACCAGTAA pal 574287 - 573766 - | peptidoglycan-associated outer membrane lipoprotein tolB 575614 - 574322 - | translocation protein TolB tolA 576988 - 575747 - | cell envelope integrity inner membrane protein TolA TERM 706 576132 - 576160 + g 100 -13.1 -4.63527 | opp_overlap 576129, overlap 576130 576129 576138 576153 CCGAAAATATCATCT GCCTCTGCGGCAG CTT TTGCTGCAGCGGC TTTTTCAGCTGCTGC TERM 707 576138 - 576190 + g 100 -8.2 -5.36441 | opp_overlap 576129, overlap 576130 576129 576132 576153 576179 576183 ATATCATCTGCCTCT GCGGCAGCTTTTGCTGCAGCGGCT TTTTC AGCTGCTGCTTTTGCCGCTGCCGC TTTTTTGTCTGCGGC TERM 708 576153 - 576175 + g 91 -11.3 -4.11216 | overlap 576132 576138 GCGGCAGCTTTTGCT GCAGCGGCT TTTTC AGCTGCTGC TTTTGCCGCTGCCGC TERM 709 576183 - 576208 + g 85 -6.8 -4.84359 | overlap 576138 576179 576201 GCTGCTGCTTTTGCC GCTGCCGC TTTTTTGTCT GCGGCGGC TTTTTCTGCCGCTGC TERM 710 576201 - 576223 + g 90 -9.8 -4.32177 | overlap 576179 576183 576216 GCCGCTTTTTTGTCT GCGGCGGC TTTTTCT GCCGCTGC TTTCTTATCAGCTGC TERM 711 576234 - 576256 + g 83 -6.2 -4.95806 | overlap 576216 576232 576247 576249 GCTGCTTTCTTATCA GCTGCTGC CTTATCA GCAGCCGC TTTTTCTGCTGCTTT TERM 712 576249 - 576268 + g 87 -4.9 -5.26316 | overlap 576232 576234 576247 GCTGCTGCCTTATCA GCAGCCG CTTTTT CTGCTGC TTTTTTGTCGGCTGC TERM 713 576279 - 576301 + g 72 -6.2 -4.32177 | overlap 576277 576293 576294 GCTGCTTTTTTGTCG GCTGCAGC TTTCTCT GCTGCCGC TTTCTTATCAGCTGC TERM 714 576399 - 576424 + g 70 -4.5 -4.46854 | overlap 576397 576366 TTCTTTCTTGCTTCA GCTGCAGCTGC TTCT GCCGCTTCCGC TTTCTTCTTCAGTGC TERM 715 576441 - 576457 + g 84 -3.5 -5.27923 | TTCTTCTTCAGTGCC GCAGCGG CTA CCTCGGC TTTTTTCTGCGCTTC TERM 716 576618 - 576635 + g 74 -3.4 -4.93296 | gap 1, overlap 576620 AACTCGGCCTGTTTT GC-GGCT TCTTC AGCCTGC TTTTTCTGCTCCTGA tolR 577481 - 577053 - | colicin uptake protein TolR tolQ 578177 - 577485 - | colicin uptake protein TolQ ybgC 578578 - 578174 - | acyl-CoA thioester hydrolase YbgC TERM 717 578707 - 578682 - R 82 -7.6 -4.57341 | opp_overlap 578683, overlap 578683 AAGGGCGCGTAAAAA TTTATGGGCC TGGAGC GGCCCATAAT TTTTTAAAGAGAATT TERM 718 578706 - 578683 - R 79 -11.1 -3.33922 | opp_overlap 578683, overlap 578682 AGGGCGCGTAAAAAT TTATGGGCC TGGAGC GGCCCATAA TTTTTTAAAGAGAAT TERM 719 578683 - 578706 + r 100 -11.1 -5.00884 | opp_overlap 578683 578682 AGGGCGCGTAAAAAT TTATGGGCC TGGAGC GGCCCATAA TTTTTTAAAGAGAAT ybgE 579021 - 578728 - | hypothetical protein TERM 720 578986 - 578959 - G 81 -12.1 -3.21595 | gap 1, opp_overlap 578964, overlap 578946 578964 AAGCGCCATCACGAA GGA-AAGCGCCC GCAGG GGGCGCTTGTCC ATTACCGCATACAAG TERM 721 578964 - 578980 + g 76 -10.8 -3.41878 | opp_overlap 578946 578959 578964 CCATCACGAAGGAAA GCGCCC GCAGG GGGCGC TTGTCCATTACCGCA TERM 722 578980 - 578964 - G 86 -10.8 -3.97042 | opp_overlap 578964, overlap 578946 578959 CCATCACGAAGGAAA GCGCCC GCAGG GGGCGC TTGTCCATTACCGCA cydB 580288 - 579149 - | cytochrome d terminal oxidase polypeptide subunit II cydA 581875 - 580304 - | cytochrome d terminal oxidase, polypeptide subunit I TERM 723 582664 - 582637 - R 90 -10.6 -4.23213 | overlap 582638 582662 TGTAGACCGAATAAA GCGTTCATGCCG TATC CGGCATGAACAA AGCGCCCTTTGTCAA TERM 724 582663 - 582638 - R 86 -14.1 -3.13446 | overlap 582637 582662 GTAGACCGAATAAAG CGTTCATGCCG TATC CGGCATGAACA AAGCGCCCTTTGTCA ybgG 585353 - 582720 - | alpha-mannosidase TERM 725 583022 - 583036 + g 71 -2.8 -4.77567 | CTTTGTTGAGCTTCA TCGCAT CCC ATGGGA TTTTGTTGTAACACT TERM 726 584310 - 584349 + g 79 -3.7 -5.08169 | gap 2, opp_overlap 584309, overlap 584309 584312 GATTTCGCGATGAAC TT-TG-TCACGACAGCAGC AGCC GATGCTGTCGTGGGCATGA TTTTTTAAGATCTCT TERM 727 584312 - 584346 + g 72 -10.1 -3.38726 | gap 1, opp_overlap 584309, overlap 584309 584310 TTTCGCGATGAACTT TG-TCACGACAGCAGC AGCC GATGCTGTCGTGGGCA TGATTTTTTAAGATC hrsA 587347 - 585371 - | 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC TERM 728 586189 - 586204 + g 77 -8.2 -4.03234 | opp_overlap 586188 586187 GTCCAGCCGCAAAGC CTGGCG CTAA CGCCGG TTTATCTGCCAGCGA TERM 729 588207 - 588190 - gR 100 -11.3 -5.01535 | CGATAAGCACAAAAA GGCCATC ATAC GATGGCC AACCATGTGGAAACC sucD 589152 - 588283 - | succinyl-CoA synthetase subunit alpha farR 587457 - 588401 + | DNA-binding transcriptional repressor MngR sucC 590318 - 589152 - | succinyl-CoA synthetase subunit beta TERM 730 589247 - 589260 + g 76 -9.5 -3.73068 | CAGCCAGTTTCTTCG CGCCG AGTT CGGCG TTGTTACCTTCCAGA TERM 731 589650 - 589673 + g 77 -10.2 -3.59979 | opp_overlap 589652 ATCAGGCTGGCGGAA CAGGGCGTTG CCAT CAGCGCCCAG TTTGCCGTCGAGGCA TERM 732 589893 - 589913 + g 73 -4 -4.81249 | gap 1 AACTTTATGGATCAG GT-GCGGAG TTTC TTCCGCCAC TTTTTCGATTTCCAC TERM 733 590391 - 590357 - R 79 -10.8 -3.55444 | TCGTTATCTTTTAAA CCGTAGACCGACAC CCTATCC ACGTCGGTCTACAG TGCAGGTGAAGCTTA sucB 591629 - 590412 - | dihydrolipoamide acetyltransferase TERM 734 591082 - 591098 + g 70 -3.6 -4.67353 | ACACGCTTACGCAGG CGAGTC ATCGG GACACG TTTTTCACTACGTGC kgd 594445 - 591644 - | alpha-ketoglutarate decarboxylase TERM 735 593830 - 593842 + g 100 -7.7 -5.48063 | CAGCGGCGGTCAGTT CGCTT AAG AAGCG TTTTTTCTCTTCGCT TERM 736 593886 - 593902 + g 83 -5.1 -5.11063 | CGACCAGACTCGATA CGCTG TTGGATC CAGCG TTTTTCTTCGGTGCT S0585 594687 - 594427 - | hypothetical protein TERM 737 594555 - 594612 + g 72 -4.3 -4.67607 | gap 1, opp_overlap 594563 594564, overlap 594519 594556 594563 594564 CTACGTAGTGGCTCG CGAAGGAA-CCTTTAAAAACTGTCTTAG TGT CAGGGGCAGTTTTTAAAGATTTCCTGCA TTTCTTTGTTACGCC TERM 738 594564 - 594602 + g 71 -11.2 -2.89178 | opp_overlap 594564 594563, overlap 594563 594556 594555 GGCTCGCGAAGGAAC CTTTAAAAACTGTCTTAG TGT CAGGGGCAGTTTTTAAAG ATTTCCTGCATTTCT sdhB 595462 - 594746 - | succinate dehydrogenase iron-sulfur subunit sdhA 597244 - 595478 - | succinate dehydrogenase flavoprotein subunit TERM 739 596484 - 596531 + g 70 -11.2 -2.83299 | gap 1, overlap 596483 596520 CCACGGCAACCTTCG GTGACCAGTACGCCCGCACCGGC AAT GCCGGT-CGGGTGGAATTGCCAC ATTTCCATATCCTGC sdhD 597591 - 597244 - | succinate dehydrogenase cytochrome b556 small membrane subunit sdhC 597974 - 597585 - | succinate dehydrogenase cytochrome b556 large membrane subunit TERM 740 597875 - 597864 - G 70 -5.8 -4.1822 | GCCCACTGCAACAAA GGTG ATCA CACC GGAAACGCGATGGAG gltA 598683 - 599966 + | type II citrate synthase TERM 741 599993 - 600020 + F 100 -15 -4.99035 | opp_overlap 599992 599991 599989 TAAGTTGTAAATATT TTAACCCGCCGT TCAA ATGGCGGGTTAA TTTTTATATGCCTAA TERM 742 600071 - 600060 - f 73 -2.2 -5.27023 | ATTGTAAAAATAAAA TCCA CTAT CGGA CATTCATATATTCTA TERM 743 600140 - 600120 - f 93 -9.9 -4.65032 | opp_overlap 600118 600120 TAAATTATAAACAAA TAGATGATT TTT AATCATCTA TCTTCCTCTCAGTTA TERM 744 600120 - 600140 + F 71 -9.9 -3.21288 | opp_overlap 600120, overlap 600118 TAAATTATAAACAAA TAGATGATT TTT AATCATCTA TCTTCCTCTCAGTTA TERM 745 600305 - 600289 - f 73 -2.3 -5.24003 | overlap 600291 AAGAAAAACTAAAAA CATTCGA CAA TCAAATA AGATATTCTTGCACC ybgD 600357 - 600923 + | putative fimbrial-like protein TERM 746 600934 - 600951 + F 100 -14.1 -3.76781 | AATAAGTATTACTTT GGCGGCG CTAT CGCCGCC TTTCATAAAATATTT TERM 747 601074 - 601097 + G 77 -8.2 -4.07618 | opp_overlap 601076, overlap 601076 TGAATGTTCTCGATA AATCAATGCG CGAC CGCATTGATA TTTCATTATTAAAGG TERM 748 601076 - 601095 + G 81 -10.8 -3.62957 | opp_overlap 601076, overlap 601074 AATGTTCTCGATAAA TCAATGCG CGAC CGCATTGA TATTTCATTATTAAA TERM 749 601095 - 601076 - g 86 -10.8 -3.86194 | opp_overlap 601076 601074 AATGTTCTCGATAAA TCAATGCG CGAC CGCATTGA TATTTCATTATTAAA TERM 750 601131 - 601118 - g 76 -3.8 -5.01811 | opp_overlap 601126 TTATTAAAGGAAAAA GGAG TCATTG CTCC CGGTGAGTATTTTGT TERM 751 602301 - 602291 - g 70 -6.8 -4.0648 | AATTACAGCAAACAA GTGG ATG CCAC TAACAGCACGATTTC ybgQ 600974 - 603433 + | putative outer membrane protein TERM 752 603747 - 603759 + G 71 -3.3 -4.8667 | AAAATTACCGGGCGA TCGCG AAA CGCTA TTTTTCTACAATATG ybgP 603448 - 604179 + | putative chaperone TERM 753 605261 - 605288 + F 85 -12.8 -3.35522 | overlap 605259 TAACTGATTTGCCAT GATGCCCTTTGC AGCC GGAAAGGGCATC TCTTTCAGAAAATTG abrB 605359 - 606450 + | putative transport protein nei 607238 - 606447 - | endonuclease VIII ybgL 608008 - 607274 - | hypothetical protein TERM 754 607832 - 607815 - G 78 -8.5 -4.25104 | GCGCTGCGACCAAAA TTTTCCC TGTC GGGAAAA CTCGGGTGAGCGCCA ybgJ 609580 - 608924 - | putative carboxylase TERM 755 609348 - 609323 - G 72 -6.7 -4.20918 | opp_overlap 609323 CGGAATTTCAATAAA GCGAGACTCAG GTTC CAGGGCCTCGC TCTCCTCCCACCAGC ybgI 610346 - 609603 - | putative hydrolase-oxidase TERM 756 609805 - 609781 - G 70 -3.5 -4.71426 | gap 1, overlap 609785 609796 TCGCCAGTAATAAAA GCATCCACGC CAAAAC GCGCGG-CGC TATCGATAAAACTTT ybgH 610617 - 612098 + | putative transport protein TERM 757 612110 - 612151 + T 77 -10.2 -3.46936 | gap 1, overlap 612107 612145 ATAATAGGCCAGCAC CG-ATGCCTGATGCGACGC TTGAC GCGTCTTATCAGGCCTACG TATTTCCTGCAATTT phrB 613666 - 612248 - | deoxyribodipyrimidine photolyase TERM 758 612692 - 612702 + g 81 -8.2 -4.39571 | opp_overlap 612691 612692 AGCGGCATCAATAAT CGGG TAT CCCG TTTTGCCTTTCTGCC ybgA 614172 - 613663 - | hypothetical protein S0604 614301 - 614588 + | hypothetical protein TERM 759 614626 - 614600 - T 100 -10.2 -5.32699 | opp_overlap 614600 TTAAATATTAAAAAA GCTGGGAAGATT TAA AACCTTCCTAGC TTTTTATTCTGTCTT TERM 760 614600 - 614626 + T 100 -10.2 -5.28561 | opp_overlap 614600 TTAAATATTAAAAAA GCTGGGAAGATT TAA AACCTTCCTAGC TTTTTATTCTGTCTT rhsE 618412 - 615026 - | putative Rhs-family protein TERM 761 616554 - 616526 - G 72 -10.2 -3.39784 | overlap 616524 CCACTGGTAATAATA CCCTTCACCGCC TGGCT GGCGGTGCAGCG TCATGCAGTGGTTTT TERM 762 618037 - 618076 + g 81 -9.8 -3.95022 | gap 1, overlap 618070 CCTGCGCCTCTATGT CCTGCCGCG-ATGCCGCAG TCG CCGCTGCCCGCGCGGCAGG TTTGCTGTTGATCCA S0606 619531 - 619028 - | IS1 orfB S0607 619734 - 619450 - | IS1 orfA TERM 763 620131 - 620160 + r 90 -13.7 -3.36273 | opp_overlap 620125 620122 620131, overlap 620123 620125 ATAATACGATGGAAA CGTCTTCCATGTT AATT ATCATGGAAGACG TTGATGTTGAACACC TERM 764 620160 - 620131 - R 100 -13.7 -3.72009 | opp_overlap 620123 620125 620131, overlap 620125 620122 ATAATACGATGGAAA CGTCTTCCATGTT AATT ATCATGGAAGACG TTGATGTTGAACACC TERM 765 620208 - 620174 - R 80 -12.2 -3.04144 | opp_overlap 620183, overlap 620180 CGTTGATGTTGAACA CCTAAACCAGCCCCCT GAT ACGAGGCTGGCTTAAG CGCGCAGGCAATCAG TERM 766 620202 - 620180 - R 79 -9.8 -3.76373 | opp_overlap 620183, overlap 620174 TGTTGAACACCTAAA CCAGCCCCCT GAT ACGAGGCTGG CTTAAGCGCGCAGGC ybfA 620426 - 620220 - | hypothetical protein TERM 767 620626 - 620637 + H 82 -5.8 -5.14894 | opp_overlap 620626 CCATCAGTTAAATCA TGGC CTTT GCCA TTTTTATACTTTTTT kdpA 620828 - 622501 + | potassium-transporting ATPase subunit A TERM 768 623230 - 623246 + F 73 -7.9 -4.11216 | overlap 623225 TCTTTTTACTGGCAA CCGCCAC GCT GTGGCCG TTTTCCGCGTGGGGC TERM 769 623534 - 623518 - f 73 -2.2 -5.14563 | gap 1, overlap 623519 GCGTGGATGAAAAAA CGCTGGC TGAC GCC-GCA CAACTGGCTTCGCTG TERM 770 624273 - 624290 + F 75 -9.9 -3.61517 | opp_overlap 624271 GCATTGCCAACGATG TGGCGAA ATAC TTCGCCA TTATTCCGGCGGCGT kdpC 624580 - 625152 + | potassium-transporting ATPase subunit C TERM 771 625475 - 625496 + F 76 -11.6 -2.66692 | opp_overlap 625475, overlap 625474 ATCTTAATGGACGAA CTGGCGCA CAGTAA TGCGCCAG GTTCTCGTCATCCTA TERM 772 625496 - 625475 - f 81 -12.3 -3.22091 | opp_overlap 625475 625474 ATCTTAATGGACGAA CTGGCGCAC AGTA ATGCGCCAG GTTCTCGTCATCCTA TERM 773 625620 - 625650 + F 70 -2.5 -5.08824 | gap 1, opp_overlap 625627, overlap 625624 TCAGCGGCGTCACCG GAATTCAGGTACGG GAAA CCGTGCCCG-ATCC TTTTTTCGATGCCGC TERM 774 625624 - 625647 + F 70 -8.8 -3.39842 | opp_overlap 625627, overlap 625620 CGGCGTCACCGGAAT TCAGGTACGG GAAA CCGTGCCCGA TCCTTTTTTCGATGC TERM 775 626483 - 626497 + F 74 -11.4 -2.82519 | overlap 626481 ATGGACGCTGGCCTT CGGTGG TTG CCACCG TCATTAATGTGGTGA TERM 776 629900 - 629914 + F 73 -7.8 -4.03234 | opp_overlap 629877 GAGCGTTGCTACAGG CTGGTG CAA CACCGG TTTATCTGGAAACGG potE 631391 - 632710 + | putrescine transporter TERM 777 632747 - 632728 - T 85 -5.6 -5.41359 | opp_overlap 632728, overlap 632730 AAGCAAAGTAAAAAA GGGCGATC TTGC GACCGCTC TTTTTTTATTAAATG TERM 778 632728 - 632747 + T 100 -5.6 -5.8187 | opp_overlap 632728 632730 AAGCAAAGTAAAAAA GGGCGATC TTGC GACCGCTC TTTTTTTATTAAATG pgm 634406 - 632766 - | phosphoglucomutase TERM 779 634371 - 634392 + g 78 -10.9 -3.42621 | opp_overlap 634366 AATCAAATCACTCTG TTGTGCAGG TTGG CCTGCACGA TTGTGGATTGCCATT seqA 634977 - 634432 - | replication initiation regulator SeqA TERM 780 634773 - 634755 - G 81 -11 -3.60151 | opp_overlap 634754 634755 CGTCCGAAAGCAGAA GTTCACGC ATT GCGCGAAC CTTGTCTTTAATCGT ybfF 635162 - 635926 + | hypothetical protein ybfE 635997 - 636359 + | LexA regulated protein fldA 636499 - 637029 + | flavodoxin FldA TERM 781 637035 - 637062 + F 100 -16.4 -3.19463 | overlap 637037 TAATGCCTGATGTGA TGCGGCGTAGAC TCAT GTCTACGCCGTA TTAATAGATAATGCC TERM 782 637037 - 637060 + F 100 -16.8 -3.15996 | overlap 637035 ATGCCTGATGTGATG CGGCGTAGAC TCAT GTCTACGCCG TATTAATAGATAATG fur 637318 - 637764 + | ferric uptake regulator TERM 783 637806 - 637779 - T 73 -11.4 -2.72463 | opp_overlap 637784, overlap 637784 AGCCAGCCTGAACGA GAAAAGCCAACC TGCG GGTTGGCTTTTT TATACAAGGGAAATA TERM 784 637801 - 637784 - T 95 -11.3 -4.5442 | opp_overlap 637784, overlap 637779 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG TERM 785 637784 - 637801 + T 100 -11.3 -5.24129 | opp_overlap 637784 637779 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG TERM 786 637847 - 637828 - T 80 -5.7 -5.011 | opp_overlap 637825 637828 637830 AGGGAAATAAGAAAA GCGAGAG TTACAG CTCTCAC TTATTTGTTATTACT ybfN 638174 - 637848 - | hypothetical protein ybfM 639617 - 638211 - | hypothetical protein TERM 787 638504 - 638517 + g 81 -6.7 -4.63527 | CGCCGATGGCGAAGC CTGGA AGAT TCCAG TTTTTCAGGTCATAC TERM 788 638766 - 638786 + g 74 -8.3 -3.86897 | opp_overlap 638762 638765 GCCGTCATAAAGATC GTTGACGCT GCG ATCGTCAAC TTTATCGCGGGTACC TERM 789 639995 - 639979 - R 100 -11.5 -5.4588 | opp_overlap 639979 GAAAAGCAGAAAAAA CGCCGCA GAG CGCGGCG TTTGGGATTGTTTGC TERM 790 639979 - 639995 + r 83 -10.8 -3.74238 | opp_overlap 639979 GAAAAGCAGAAAAAA CGCCGC AGAGC GCGGCG TTTGGGATTGTTTGC glnS 641860 - 640196 - | glutaminyl-tRNA synthetase TERM 791 640832 - 640844 + g 86 -9.1 -4.42639 | opp_overlap 640825 640826, overlap 640826 ATCGATAACCGCCAT TGCGC GCG GCGCA TTTTCGTTGAGATCT TERM 792 641921 - 641934 + r 75 -3.1 -5.10029 | TATAAGCGGGACAGG CTGAC AACT GTTAG TTTTTTAAAATTGAT TERM 793 642012 - 641990 - R 100 -12 -6.15828 | opp_overlap 641990 TTGATGAAAAAAAAA GCGGCAGAGA AGA TCTCCACCGC TTGTCATTGTTGGAT nagE 644009 - 642063 - | N-acetyl glucosamine specific PTS system components IIABC TERM 794 643954 - 643932 - G 74 -11.2 -3.1886 | overlap 643923 ACCGAATCGCAGCAA CAGCGCCGCC ACC GGCAGCACCG CGATAGGGAGCTGTA TERM 795 644155 - 644133 - H 76 -8.6 -4.09243 | CAGAGTGTGTGAAAA TTTAATTCGC ATC GCAAATTAAA CGCGTGTCTTTTGTG TERM 796 644728 - 644715 - g 100 -6.7 -5.52023 | AGTATGAAGAAAAAA TCCGT TCTT ACGGA AAAATTCATCTGTTT nagB 644342 - 645142 + | glucosamine-6-phosphate deaminase TERM 797 645827 - 645814 - g 72 -4.5 -4.62203 | gap 1 TTGAAAGAAGCAAAA GC-CGG TTT CCGCGC GGGGATTACCTTTGC TERM 798 645997 - 645985 - g 73 -9.1 -3.66356 | ATTCGTAACGCTAAA CGCCT TAA AGGCG ACAAACTGTGTCTGG TERM 799 646047 - 646057 + G 70 -4 -4.59773 | AGCAGGTGCCAACAT TGAA CAG TTCA TTTTTGCGGGTAAAA nagA 645202 - 646350 + | N-acetylglucosamine-6-phosphate deacetylase nagC 646359 - 647579 + | transcriptional repressor of nag (N-acetylglucosamine) operon TERM 800 648408 - 648383 - f 82 -13.3 -3.06162 | opp_overlap 648387 GACGTTATCTGAATA CCACCCACGTC TGCG GACGTGGTTGG CTCTGATGACAAACG TERM 801 648387 - 648404 + F 77 -11.3 -3.14468 | opp_overlap 648383 TTATCTGAATACCAC CCACGTC TGCG GACGTGG TTGGCTCTGATGACA TERM 802 648705 - 648719 + F 95 -7.8 -5.40072 | overlap 648697 648697 ATAGCTTGCGCACAG TGCTGC TTT GCGGCA TTTTTTTAAACAAGC TERM 803 650076 - 650066 - g 71 -3.2 -4.87318 | overlap 650068 GGCAAAATGGAAAAA CACA TCC TGCG TGAATGTTTTGAGTC asnB 648776 - 650440 + | asparagine synthetase B TERM 804 650452 - 650475 + T 100 -13.8 -4.56133 | opp_overlap 650447, overlap 650454 GTAAGAAATGCGGTA CTGCCCCGGA GAAA TCCGGGGCTG TTTTAGTTATTGCGC TERM 805 650454 - 650473 + T 100 -15 -3.88577 | opp_overlap 650447, overlap 650452 AAGAAATGCGGTACT GCCCCGGA GAAA TCCGGGGC TGTTTTAGTTATTGC TERM 806 651338 - 651327 - T 73 -4.4 -4.81249 | CGGCAAATTCAAAAA CCAA TTTG TTGG GGTATCGCCAAGCGG TERM 807 651527 - 651554 + T 77 -11.4 -3.28209 | opp_overlap 651533, overlap 651533 TACCCCAGCCACATT AAAAAAGCTCGC TTCG GCGAGCTTTTTG CTTTTCTGCGTTCAT TERM 808 651533 - 651548 + T 100 -10.4 -5.1417 | opp_overlap 651533, overlap 651527 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGC TERM 809 651548 - 651533 - T 100 -10.4 -5.22312 | opp_overlap 651533 651527 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGC ubiF 652851 - 651676 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 810 653346 - 653369 + G 72 -10.2 -3.39505 | gap 1, opp_overlap 653344 653345 CGGAGATGATCAACT CCGTGC-GCGG CGA CCGCAGCCCGG TTGTAGATATCAGCT TERM 811 654367 - 654354 - g 72 -8.1 -3.89346 | TGCGCATGGCAGAAA CACCG GAGT CGGTG ATTGCCCGCACCCGC yleA 652997 - 654421 + | hypothetical protein TERM 812 654426 - 654451 + F 100 -9.7 -5.51046 | gap 1, overlap 654428 ATCAGCCGTAATTCT CA-GGCCTGCCG TTC CGGTGGGCCTTG TTTTTTCTCTCTTTA TERM 813 654428 - 654448 + F 100 -12.5 -4.78477 | overlap 654426 CAGCCGTAATTCTCA GGCCTGCCG TTC CGGTGGGCC TTGTTTTTTCTCTCT TERM 814 654935 - 654916 - g 82 -9.2 -4.26292 | overlap 654931 AATATCAAAACTAAA CGCGGCGT AATT AAGCCGCG CACGCCAAACCAGGC ybeZ 654535 - 655614 + | putative ATP-binding protein in pho regulon TERM 815 655670 - 655655 - g 73 -9 -3.67611 | GGCATGTGAAGATAA TTCCGG GTTA CCGGAA GAGAGCCAGTTTCAA ybeY 655611 - 656078 + | putative metalloprotease TERM 816 656109 - 656132 + F 86 -8.8 -4.43477 | overlap 656103 656108 ACTGGCAGACGTCCC CGCCGTTGGT GATT AACGACGGCG TTTTGATTAACTAAC ybeX 656168 - 657046 + | putative transport protein TERM 817 657095 - 657121 + G 81 -10.2 -3.97307 | gap 1, opp_overlap 657095 GCCTCATTAATTGAA CGCCAGC-GCA TTCGCC TGCTGCTGGCG TTATTATTCGGTGCC TERM 818 657121 - 657095 - g 70 -10.2 -3.20723 | gap 1, opp_overlap 657095 GCCTCATTAATTGAA CGCCAGC-GCA TTCGCC TGCTGCTGGCG TTATTATTCGGTGCC TERM 819 657734 - 657707 - g 72 -10.6 -3.12351 | opp_overlap 657703 657703 CTGCGTTACATCCAA TGGTTTACCCCG CAAC CGGAGAAAACCA TTCAGGTTTCGATGG lnt 657071 - 658609 + | apolipoprotein N-acyltransferase TERM 820 658913 - 658897 - f 71 -7.3 -4.08485 | TTTAGCCAAACTAAA TGTACCT AAC AGGCACA ACACTGCACAATAAA TERM 821 659455 - 659427 - g 81 -7.3 -4.72272 | overlap 659446 CCTGTTGACCAAAAA GGGCGGCGATATC AAA GATTTTGCCGACC TGAAAGGCAAAGCCG TERM 822 659670 - 659659 - g 70 -5.8 -4.29326 | GCGAAAGCGAAGAAA CCAG ACAA CTGG GATATCGTCGGCAAG ybeJ 659005 - 659913 + | glutamate and aspartate transporter subunit TERM 823 660036 - 660063 + F 100 -16.4 -5.26316 | TGGGTAACAATCTTC GAGGGTAGCAGT TAAC GCTGCTACCCTC TTTTTTCTGGAGTAG TERM 824 660392 - 660409 + G 71 -2 -5.01811 | TGGTTTAAGGCCGAG CTGGAT CCCAAT ATTCAG TTTTTCCTTTCATCC gltJ 660083 - 660823 + | glutamate/aspartate transport system permease gltK 660823 - 661497 + | glutamate/aspartate transport system permease gltL 661497 - 662222 + | ATP-binding protein of glutamate/aspartate transport system rihA 662340 - 663275 + | ribonucleoside hydrolase 1 TERM 825 663285 - 663326 + T 75 -6.7 -4.40232 | gap 1, overlap 663287 GCTTAACACTCGTCA TTGATTAAGATCACCACGCG TTA CCTG-GGTGGTCTTAATCTA TTTATCTCTTTTTCT TERM 826 663287 - 663324 + T 76 -9.3 -3.77089 | gap 1, overlap 663285 TTAACACTCGTCATT GATTAAGATCACCACGCG TTA CCTG-GGTGGTCTTAATC TATTTATCTCTTTTT TERM 827 665075 - 665030 - T 79 -11 -3.3514 | overlap 665031 665033 665055 ATTGAGACCTCATAA TCACGGCTGCCGGATGCGGC GTAAAT GCTGCATCCGGCATCGGCGC AAAAAACACATCGTC TERM 828 665074 - 665031 - T 86 -14.5 -2.60763 | overlap 665030 665033 665055 TTGAGACCTCATAAT CACGGCTGCCGGATGCGGC GTAAAT GCTGCATCCGGCATCGGCG CAAAAAACACATCGT TERM 829 665072 - 665033 - T 82 -13.5 -2.84298 | overlap 665031 665030 665055 GAGACCTCATAATCA CGGCTGCCGGATGCGGC GTAAAT GCTGCATCCGGCATCGG CGCAAAAAACACATC ybeV 666540 - 665089 - | hypothetical protein ybeU 667244 - 666537 - | putative tRNA ligase TERM 830 666687 - 666705 + g 77 -10.2 -3.66784 | TTTGTACAGGGTTAG CGCCTCGC GTA GCGAAGCG TTGTCTTCGCACTGA TERM 831 667885 - 667864 - g 74 -2.9 -4.9934 | overlap 667866 ACAACATTACAAAAA TGCGGAAAG ATTA CTTGCCGGA CTTCCCGCACATTAA ybeT 667346 - 667900 + | hypothetical protein ybeS 669337 - 667910 - | putative enzyme ybeR 670041 - 669334 - | hypothetical protein TERM 832 670284 - 670300 + G 73 -3.7 -4.81212 | AAGGCGATTGCGAGG CTCAATA TAT TGTTGGG TTTTATTATAATCGC TERM 833 670584 - 670559 - g 85 -9.7 -4.1523 | opp_overlap 670580, overlap 670580 CCCAACTATAAAGAA GCGGTTACCTG GTAT CAGATAGCCGC GGAGAGCGGAATGTC TERM 834 671099 - 671081 - g 76 -11 -3.30039 | opp_overlap 671096, overlap 671079 TACGGAGAAGGAAGA CCTGTCGA TCT CCGACAGG CTCTCGACCTGTATC ybeQ 670199 - 671182 + | hypothetical protein ybeL 671734 - 671252 - | hypothetical protein TERM 835 672314 - 672298 - g 78 -5.1 -4.8048 | opp_overlap 672301 CGCGTATATGAAAAA CCAGC TCAAAAT GCTGG GCTTTGGTTATGACT leuS 671969 - 674551 + | leucyl-tRNA synthetase TERM 836 674631 - 674650 + G 72 -10 -3.36785 | overlap 674632 CGGGTGTGGCTGGCA TCTGCGTG ACAC CACGCAGG TTCCTTCCACTATGA TERM 837 674632 - 674649 + G 73 -11.3 -2.6175 | overlap 674631 GGGTGTGGCTGGCAT CTGCGTG ACAC CACGCAG GTTCCTTCCACTATG TERM 838 674797 - 674765 - g 70 -4.7 -4.55295 | opp_overlap 674770 TGCTTGATAAAGAAA CCACGCGTAAGGACG TTC CATCCCTGCGTTTGG GTAAAGTGAGCATCG rlpB 674566 - 675147 + | LPS-assembly lipoprotein RplB TERM 839 675168 - 675210 + G 100 -12 -4.45544 | gap 1, opp_overlap 675171, overlap 675169 675171 CGGTTGTACCCGGAA CA-ACTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCGTATC TTTTACTTGGTAACG TERM 840 675169 - 675208 + G 100 -17.1 -3.83437 | opp_overlap 675171, overlap 675168 675171 GGTTGTACCCGGAAC AACTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCGTA TCTTTTACTTGGTAA TERM 841 675206 - 675171 - g 100 -17.5 -3.63515 | opp_overlap 675169 675168 675171 TTGTACCCGGAACAA CTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCG TATCTTTTACTTGGT TERM 842 675171 - 675206 + G 100 -19.7 -3.49321 | opp_overlap 675171, overlap 675169 675168 TTGTACCCGGAACAA CTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCG TATCTTTTACTTGGT holA 675147 - 676178 + | DNA polymerase III subunit delta TERM 843 676478 - 676488 + G 70 -4.6 -4.48713 | overlap 676471 AACAAGGACCGGACG TGCC GCT GGCG TTTATTATTGGTCAG nadD 676180 - 676821 + | nicotinic acid mononucleotide adenylyltransferase phpB 676845 - 677456 + | alpha-ribazole phosphatase ybeB 677824 - 678033 + | hypothetical protein ybeA 678037 - 678504 + | SPOUT methyltransferase superfamily protein TERM 844 678594 - 678606 + G 77 -6.2 -4.66264 | overlap 678588 GCTGTTTGTGCGCCG GGCG CTGGT CGCC TTTTTGGGGATTTTG TERM 845 679871 - 679858 - g 74 -2.3 -5.03747 | opp_overlap 679846, overlap 679846 679860 AAACGCTTTAAAAAA CCGTG GTAT CAGGG TGACACCATTCCGGT mrdA 678535 - 680436 + | penicillin-binding protein 2 TERM 846 680498 - 680464 - g 100 -6.5 -5.80364 | ATCCGAATAAAAAAA CATTCTGGGATAAAG TCCAT CTCGATCCCACAATG CTGCTGATTTTACTG mrdB 680439 - 681551 + | cell wall shape-determining protein rlpA 681562 - 682650 + | rare lipoprotein A TERM 847 683106 - 683121 + G 77 -10.4 -3.64049 | CAACGACGCATGGGC CACCGG TAAC CCGGTG TTTAAAGGTTCTTCG dacA 682789 - 684000 + | D-alanyl-D-alanine carboxypeptidase fraction A TERM 848 684055 - 684082 + F 75 -9.8 -3.56675 | opp_overlap 684059, overlap 684053 684059 CTAAGCATCAGTAAA AAAACTCCCGCC TTCT GGCGGGAGTTGC TATTTAATTACGTTA TERM 849 684078 - 684059 - f 100 -15 -5.55664 | opp_overlap 684055 684053 684059 GCATCAGTAAAAAAA CTCCCGCC TTCT GGCGGGAG TTGCTATTTAATTAC TERM 850 684059 - 684078 + F 100 -15 -3.50456 | opp_overlap 684059, overlap 684055 684053 GCATCAGTAAAAAAA CTCCCGCC TTCT GGCGGGAG TTGCTATTTAATTAC ybeD 684111 - 684374 + | hypothetical protein lipB 684475 - 685116 + | lipoyltransferase ybeF 685528 - 686328 + | putative DNA-binding transcriptional regulator TERM 851 686647 - 686614 - g 74 -6 -4.57073 | gap 1, overlap 686616 TATCCCGGTTAAAAA CGTG-GCAACAGAGC GCGAA GCCCTGCTGCGCAAG CCGGAATGGATGAAA lipA 686537 - 687502 + | lipoyl synthase TERM 852 687539 - 687556 + T 100 -11.3 -5.36441 | opp_overlap 687539 CTGTCTGATAAAAAA CCCGCTT TTTG AAGCGGG TTTTTTGTATCGAAC TERM 853 687556 - 687539 - T 100 -11.3 -5.24129 | opp_overlap 687539 CTGTCTGATAAAAAA CCCGCTT TTTG AAGCGGG TTTTTTGTATCGAAC tatE 687806 - 687603 - | twin arginine translocase protein E ybeM 688498 - 687935 - | putative amidase TERM 854 688082 - 688100 + g 77 -3 -5.06414 | opp_overlap 688074 688084, overlap 688084 GCCAAAGGGATCTAT AATCCGGC TTT GCCCGATA TTTTTGTTCCCGCAC ccrB 688816 - 689199 + | camphor resistance protein CrcB TERM 855 689213 - 689229 + T 83 -9.4 -4.36729 | opp_overlap 689213 AAAGACCAAAAAAAA CCCGCT GATTA AGCGGG TTTTGAATTCTTGCT TERM 856 689229 - 689213 - T 100 -9.4 -5.9663 | opp_overlap 689213 AAAGACCAAAAAAAA CCCGCT GATTA AGCGGG TTTTGAATTCTTGCT cspE 689462 - 689253 - | cold shock protein CspE TERM 857 689504 - 689488 - R 71 -7.3 -4.02302 | opp_overlap 689487 689490 TTTACATGAAAAATA GACACAA ATG CTGTGTC GGTTATCAGTACACC crcA 690197 - 689637 - | palmitoyl transferase for Lipid A TERM 858 689972 - 689995 + g 100 -4.5 -5.73978 | overlap 689964 689973 CAAAACCGCCACCCC ACGGTCGCT CGTTAT AGCGATCGG TTTTTTCTTTGTCGT TERM 859 689973 - 689994 + g 74 -8 -4.01946 | overlap 689964 689972 AAAACCGCCACCCCA CGGTCGCT CGTTAT AGCGATCG GTTTTTTCTTTGTCG dcuC 690786 - 692171 + | C4-dicarboxylate transporter DcuC TERM 860 692209 - 692173 - T 74 -8.7 -3.94746 | opp_overlap 692178 692180, overlap 692175 692176 692179 692180 TCACAGGCAAGTAAA TAGTAATGCCGGAGGCA AGT TTCCTCCGGCTTTATCA TGTCACCCACTGTGG TERM 861 692207 - 692175 - T 72 -9.1 -3.56006 | opp_overlap 692178 692180, overlap 692173 692176 692179 692180 ACAGGCAAGTAAATA GTAATGCCGGAGGCA AGT TTCCTCCGGCTTTAT CATGTCACCCACTGT TERM 862 692206 - 692176 - T 78 -12.6 -2.72881 | opp_overlap 692178 692180, overlap 692175 692173 692179 692180 CAGGCAAGTAAATAG TAATGCCGGAGGCA AGT TTCCTCCGGCTTTA TCATGTCACCCACTG TERM 863 692203 - 692179 - T 75 -9.9 -3.50456 | opp_overlap 692178 692180, overlap 692176 692175 692173 692180 GCAAGTAAATAGTAA TGCCGGAGGCA AGT TTCCTCCGGCT TTATCATGTCACCCA TERM 864 692180 - 692202 + T 95 -13.4 -4.0162 | opp_overlap 692180 692179 692176 692175 692173, overlap 692178 CAAGTAAATAGTAAT GCCGGAGGCA AGT TTCCTCCGGC TTTATCATGTCACCC TERM 865 692202 - 692180 - T 81 -13.4 -2.6955 | opp_overlap 692178 692180, overlap 692179 692176 692175 692173 CAAGTAAATAGTAAT GCCGGAGGCA AGT TTCCTCCGGC TTTATCATGTCACCC TERM 866 692520 - 692557 + T 70 -9.2 -3.4052 | TTTCCAGCATATGTT TACGCTGGCGGAAACG GGTTAG CGTTTGCCCCAGTGTA TTGATTCACTTGAAG S0684 693400 - 692891 - | putative repressor protein TERM 867 695394 - 695370 - g 79 -3.6 -5.08824 | gap 1, overlap 695372 GCCGGAGTGAAAAAA GTTGTGG-TCA GATT TGATCCACAGC AGTTACACAGCACGG S0685 693963 - 695417 + | putative phage transposase S0686 695479 - 695781 + | IS600 orfA S0687 695922 - 696635 + | IS600 orfB S0688 696877 - 696632 - | hypothetical protein TERM 868 696813 - 696803 - G 72 -6.8 -4.15222 | overlap 696804 ACGGCCTTTAACAAA CTCG CGC CGAG AACCGTCGGGAAGCG S0689 697860 - 696919 - | putative bacteriophage protein S0690 697973 - 697872 - | hypothetical protein S0691 698361 - 698005 - | putative bacteriophage protein S0692 699585 - 698365 - | putative bacteriophage protein S0693 700047 - 699589 - | putative bacteriophage protein S0694 701689 - 700223 - | putative bacteriophage protein S0695 701922 - 701689 - | hypothetical protein TERM 869 701782 - 701802 + g 86 -3.9 -5.37593 | overlap 701784 701785 AACGTTTGGTGACGG TATCTCGCG TTT TGCGAGGTC TTTTTTACTTTCGAC TERM 870 701784 - 701800 + g 72 -6.5 -4.31698 | overlap 701782 701785 CGTTTGGTGACGGTA TCTCGCG TTT TGCGAGG TCTTTTTTACTTTCG S0696 702449 - 701910 - | putative bacteriophage protein S0697 703339 - 702434 - | insertion element IS2 transposase InsD S0698 703662 - 703297 - | insertion sequence 2 OrfA protein S0699 704361 - 703738 - | putative bacteriophage protein S0700 705136 - 704372 - | putative bacteriophage protein TERM 871 704947 - 704975 + g 74 -6.1 -4.57569 | TGGCAGGCTTTCTGC TGGTACGCA CTTTCCTTTTT TGCGTACCA TTTTTGCAAACCTGC S0701 705832 - 705206 - | IS911 orfB TERM 872 705614 - 705625 + g 77 -5.8 -4.63218 | opp_overlap 705610 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S0702 706029 - 705829 - | IS911 orfB TERM 873 705966 - 705986 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG S0703 706374 - 706072 - | IS911 orfA S0704 706519 - 706692 + | hypothetical protein S0705 707502 - 707804 + | IS911 orfA TERM 874 707910 - 707890 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT S0706 707847 - 708047 + | IS911 orfB S0707 708044 - 708202 + | IS911 orfB TERM 875 708259 - 708248 - f 74 -5.8 -4.63218 | opp_overlap 708253 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG S0708 708293 - 708667 + | IS911 orfB S0709 708696 - 709118 + | putative bacteriophage protein TERM 876 709199 - 709211 + F 100 -6.2 -5.96219 | opp_overlap 709198 GACATTTGAAAGAGC CCGC TTTAT GCGG TTTTTTTTATACCTG TERM 877 709878 - 709893 + F 77 -3.9 -5.26316 | GGAACACACTCTTAA CTGCC TTGGTT GGCGG TTTTTTGTACAGTGC TERM 878 710230 - 710254 + F 100 -11.5 -5.64421 | GGTAAAGGTGATTCA GGCCATCAG AGTTTTG CTGATGGCC TTTTTTCTTTCCGAT TERM 879 710364 - 710316 - g 74 -2.2 -5.13473 | opp_overlap 710342 710343 710350 710355 710359, overlap 710318 710322 710324 ATCAGATGGAAAAAA TATCAACAGGCATTGCCTACGG CACCT CCGCCGGCAGTGCCGGCTACTG GTTTTTGCAGTGGTT TERM 880 710358 - 710322 - g 77 -10 -3.66995 | opp_overlap 710342 710343 710350 710355, overlap 710318 710316 710324 TGGAAAAAATATCAA CAGGCATTGCCTACGG CACCT CCGCCGGCAGTGCCGG CTACTGGTTTTTGCA TERM 881 710356 - 710324 - g 76 -11.2 -3.39574 | opp_overlap 710342 710343 710350 710355, overlap 710322 710318 710316 GAAAAAATATCAACA GGCATTGCCTACGG CACCT CCGCCGGCAGTGCC GGCTACTGGTTTTTG TERM 882 710355 - 710365 + G 72 -4.6 -4.64598 | opp_overlap 710324 710322 710318 710316, overlap 710343 710342 710350 710359 CCTCCGCCGGCAGTG CCGG CTA CTGG TTTTTGCAGTGGTTG ybcR 710297 - 710389 + | hypothetical protein S0715 711116 - 710430 - | IS600 orfB S0716 711559 - 711257 - | IS600 orfA S0718 711835 - 713694 + | putative bacteriophage protein S0719 714295 - 713669 - | IS911 orfB TERM 883 714077 - 714088 + g 77 -5.8 -4.63218 | opp_overlap 714073 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S0720 714492 - 714292 - | IS911 orfB TERM 884 714429 - 714449 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG S0721 714837 - 714535 - | IS911 orfA S0722 714930 - 715808 + | putative replication protein DnaC TERM 885 715838 - 715861 + G 72 -8.8 -3.85698 | overlap 715841 CGTAACGATGACCTT GAAGGCGCTG TCAT CGGCGCGTTC TTTCTGCGCGGAGCA TERM 886 716772 - 716760 - g 81 -6.2 -4.82901 | TCGGGCTGATAAAAA CCCG AACCA CGGG GCGTCATGACCTTGC S0723 715805 - 717196 + | putative helicase S0724 717193 - 717450 + | putative bacteriophage protein TERM 887 717537 - 717523 - f 78 -5.6 -4.83169 | opp_overlap 717522 717523, overlap 717509 AGCCCGGGATAAAAA TCACCG AAC CGGAGA GTATTTGATGAGCGT S0725 717545 - 717745 + | putative bacteriophage protein ybcQ 717738 - 718118 + | putative Q protein TERM 888 718208 - 718223 + F 100 -11.8 -5.28176 | opp_overlap 718208 GCCACACAGCTTAAA CCCGCC TCCG GGCGGG TTTTTTATGCCTGAA TERM 889 718223 - 718208 - f 86 -11.8 -3.65425 | opp_overlap 718208 GCCACACAGCTTAAA CCCGCC TCCG GGCGGG TTTTTTATGCCTGAA TERM 890 718979 - 718989 + G 72 -4.6 -4.64598 | opp_overlap 718942, overlap 718967 718966 718974 718983 CCTCCGCCGGCAGTG CCGG CTA CTGG TTTTTGCAGTGGTTG S0731 718921 - 719136 + | putative S protein TERM 891 719170 - 719156 - g 72 -7.2 -4.29227 | overlap 719163 TGAAGCATGAAGAAA TGAATC AGC GATTCA ATCACCTGGAAAATG TERM 892 719268 - 719245 - g 81 -6 -4.77698 | gap 1, opp_overlap 719244 719245 GAAGATGAAAACAAA CGCCGCGATGA GCA TTAT-GCGGCG ATTTACGATTACTGC S0732 719140 - 719769 + | hypothetical protein S0733 719835 - 720368 + | putative endolysin R of prophage CP-933V S0734 720365 - 720769 + | endopeptidase S0735 720831 - 721133 + | IS600 orfA S0736 721274 - 721987 + | IS600 orfB TERM 893 722740 - 722755 + G 73 -4 -4.83269 | gap 1, opp_overlap 722740 AACACCGGGATAATA CGC-TCA CAC TGAAGCG TTTTTCCTCTGGTGT TERM 894 723672 - 723654 - g 100 -6.7 -5.5112 | GCGATCAATAAAAAA TACCGCC ATGCA GACGGTA CCGAAATGACCATTT TERM 895 723837 - 723823 - g 77 -8.5 -4.12188 | opp_overlap 723822 TCACCATGCCGAAAA CCCGC AATCA GCGGG GTGTGTATCTGTGTG TERM 896 723945 - 723963 + G 76 -3.8 -5.00616 | overlap 723947 TCGTATGCCATCCGC TTTCCTGA TAA TCCGGAGA TTTTTTCGCAGACAG S0737 722310 - 724220 + | putative DNA packaging protein of prophage CP-933R; terminase large subunit S0738 724221 - 724424 + | putative head completion protein gp3 S0739 724421 - 725476 + | head-tail preconnector gp5 TERM 897 725691 - 725704 + GF 75 -4.5 -4.77757 | gap 1, overlap 725688 725687 CGGGGGATTATTCGT C-CGCC ACG GGCGCG TTTTGATTTTTACCA TERM 898 725935 - 725916 - gf 72 -4.9 -4.61231 | overlap 725917 GCAGAGCGCGAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGCCCAGGC S0740 725391 - 726014 + | head-tail preconnector gp5 TERM 899 726064 - 726079 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC TERM 900 726881 - 726846 - g 78 -11.2 -3.46824 | gap 1, overlap 726847 GGATGAATTAATCAA TGCGTCGGACGCCATCA GCG TGATGGC-TGCGACGCT GAACACACACGATAC TERM 901 726880 - 726847 - g 90 -14.7 -2.67613 | gap 1, overlap 726846 GATGAATTAATCAAT GCGTCGGACGCCATCA GCG TGATGGC-TGCGACGC TGAACACACACGATA S0741 726004 - 727509 + | head-tail preconnector gp5 TERM 902 727860 - 727845 - g 77 -3.2 -5.07275 | GGATACACACAAAAA GGCGAA TGCC TTTGCC GGCAGTGCCCTGAGT S0742 727546 - 727893 + | capsid protein small subunit TERM 903 728103 - 728093 - g 88 -8.2 -4.652 | opp_overlap 728093 728095, overlap 728084 728094 728095 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG TERM 904 728734 - 728714 - g 93 -9.7 -4.56597 | TCGTGGTGGCAAAAA CGTCCTATG TGG CAGAGGACG GTACCGAAAAACGTT S0743 727951 - 728979 + | major capsid protein TERM 905 728988 - 729006 + F 100 -11.7 -4.88407 | opp_overlap 729000 GAAATAATCCGTGAG CGGGAGC TAAAT GCTCCCG TTTTTCATTCAATCA S0744 729031 - 729417 + | putative DNA-packaging protein TERM 906 729540 - 729552 + G 71 -3.3 -4.77036 | GAACTTGAGGGGACA CACCT GAC AGGGG TTTTTGATGATCCCG TERM 907 729567 - 729577 + G 70 -4 -4.63218 | GTTTTTGATGATCCC GAAA GTA TTTC TTTTGTTGCCGGGGG S0745 729429 - 729806 + | putative tail attachment protein TERM 908 729912 - 729876 - g 100 -15.9 -3.53811 | CGCATGGGCGGTAAA CCGTGTGGCGGCAAAGA TTG TTTCTGTCGCCACACGG CAGGTTGCGCAGAAT S0746 729793 - 730377 + | putative tail component of prophage CP-933K TERM 909 730428 - 730445 + G 74 -3.3 -5.01732 | overlap 730429 CGCCTTCGGGAACAG TGTGGAG ACAG CGCCACG TTTTTTGACGGGCTT S0747 730374 - 730775 + | putative tail component of prophage CP-933K S0748 730786 - 731526 + | putative tail component of prophage CP-933K TERM 910 731546 - 731563 + F 100 -14.1 -4.65895 | ACGATACTCATCATT GCCCCGG TTAT CCGGGGC TTTTTGCATCCGGAG S0749 731585 - 731971 + | putative tail component of prophage CP-933K TERM 911 732183 - 732196 + GF 76 -8.1 -4.07568 | overlap 732159 CAGCGATGCTGCGGT GGCTG ATTT CAGCC TTTTACCGGAAGAGA S0750 732034 - 732309 + | putative tail component of prophage CP-933K TERM 912 732606 - 732588 - gf 70 -4.4 -4.5442 | overlap 732599 CCCTGAATCAGAAAA TGCGCGAG GAA CAGGCGCA GGCCAGGGCACTGGC TERM 913 732619 - 732649 + GF 75 -6.1 -4.37658 | gap 1, opp_overlap 732638, overlap 732638 GCAGGCCAGGGCACT GGCGG-AGGCGC AGGATAAA GCGGCTGCCGCC TTTTATCGCCAGATT TERM 914 732648 - 732638 - gf 74 -8.2 -3.96624 | opp_overlap 732619 732638 GAGGCGCAGGATAAA GCGG CTG CCGC CTTTTATCGCCAGAT TERM 915 733256 - 733237 - gf 95 -13.6 -3.32997 | opp_overlap 733233, overlap 733232 GGGCGAGAAATTTAA CCGTCAGC TGGC GCTGACGG GACATTATGCCGGTG TERM 916 734118 - 734101 - gf 77 -2.7 -5.14163 | gap 1, overlap 734103 734105 AGCCATTAAGAAAAA TACACGGG CAA CCCGTA-A TGATGAGGCCACCCG TERM 917 734117 - 734103 - gf 76 -7.8 -4.19587 | overlap 734101 734105 CCATTAAGAAAAATA CACGGG CAA CCCGTA ATGATGAGGCCACCC TERM 918 734115 - 734105 - gf 72 -8.2 -3.67974 | overlap 734103 734101 ATTAAGAAAAATACA CGGG CAA CCCG TAATGATGAGGCCAC TERM 919 734698 - 734672 - gf 76 -5 -4.78077 | CTGAATGAAAACAAA CGCTACTGGCAG GAA CTGGAAGTGGCG CAGGGCGACTGGAAA S0751 732281 - 735322 + | putative tail length tape measure protein precursor TERM 920 735517 - 735548 + G 100 -15.2 -3.35798 | overlap 735513 TTTCTGGAACGGCAC GGTGGCGTCCGC GCATTTCA GTGGACGCCACC TTATGACTGGAAACT S0752 735322 - 735651 + | putative minor tail protein TERM 921 735800 - 735786 - g 80 -5.7 -4.94972 | GAGCAGAACGAAAAA GGTGA GCCGG TCACC TGGCAGGGGCGGCAG TERM 922 735962 - 735982 + G 90 -9.7 -4.42653 | overlap 735964 CGGCGGAACGGTGGT CCGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT S0753 735651 - 736349 + | minor tail protein TERM 923 736380 - 736364 - f 70 -9.5 -3.03214 | opp_overlap 736373, overlap 736366 AATCCATGACACAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA TERM 924 736485 - 736470 - f 70 -10.4 -2.5474 | overlap 736469 736467 TCCCAGCGAGAATAT CTCCGG TGAG CCGGAG GAACGGTTCCGGATG TERM 925 736859 - 736889 + G 74 -6 -4.45945 | overlap 736858 736856 AGGTGCCGTTGTCAT CAGCACAACCGGGC GAT GTGCTGCTGTGCTG TTTTGGTTCATCGGT S0754 736498 - 737097 + | putative tail assembly protein S0755 737094 - 737636 + | putative tail component TERM 926 737653 - 737676 + F 70 -9.6 -3.01125 | opp_overlap 737645 737658, overlap 737658 GCAAAATGTTTCATG TGAAACCGCC TGCG GGCGGTTTTG TCGTTTATGGAGCGT TERM 927 737671 - 737658 - f 75 -9.5 -3.60098 | opp_overlap 737653 737658 ATGTTTCATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 928 737658 - 737671 + F 93 -9.5 -4.64846 | opp_overlap 737658, overlap 737653 ATGTTTCATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 929 737847 - 737827 - g 71 -3.1 -4.7497 | TGGATGGATTAAAAA GCGTGCTGC TGA ACGGTACGC CGGTCCTGGATAGCG TERM 930 739458 - 739433 - g 72 -9.7 -3.30441 | GAGTATCCGTGAGAA CGACGACGGCA CGTA TGCCATCACCG CCGTGCAGCATGTGC TERM 931 740360 - 740331 - g 70 -6.5 -4.18367 | CAGCAGATACAGAAA GTTCAGGTTGATA CAAA TAATAACCTGAAC AGCATGTGGGCTGTG S0756 737697 - 741176 + | host specificity protein TERM 932 741196 - 741213 + F 100 -11.3 -5.4505 | opp_overlap 741186 741194 TATAACCCAGATACG GGCACCA GAAA TGGTGCC TTTTTTATTGCAGAA S0757 741244 - 741843 + | putative membrane protein precursor TERM 933 741871 - 741890 + F 100 -10 -4.85599 | gap 1, opp_overlap 741871 CACAGTGTTATGACA GCCCG-CTG GTT CAGGCGGGC TTTTTGTGGGGTGAA S0758 741907 - 742968 + | putative tail component encoded by cryptic prophage CP-933M S0759 743269 - 743892 + | putative tail component of prophage CP-933K TERM 934 744007 - 744030 + F 93 -10.2 -4.58395 | opp_overlap 744004 744003, overlap 744009 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 935 744009 - 744028 + F 100 -15 -3.90762 | opp_overlap 744004 744003, overlap 744007 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC S0763 745944 - 746123 + | hypothetical protein TERM 936 746165 - 746131 - T 100 -10.1 -5.24129 | opp_overlap 746131 TGCGTTGACAAAAAA TTAGCGCAAGAGGAC AAAAA ATCACCTTGCGCTAA TGCTCTGTATCAGGT TERM 937 746410 - 746384 - T 83 -13.8 -2.53759 | opp_overlap 746381, overlap 746389 746391 AATACCTTTAAGTGA TACCAGATGGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA ybhB 746893 - 746417 - | putative kinase inhibitor protein bioA 748241 - 746952 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioB 748328 - 749368 + | biotin synthesis, sulfur insertion? TERM 938 749408 - 749388 - g 76 -9.6 -3.77302 | overlap 749384 GCAGGAGAAAATCAA CGCGGCGC TCGAT GCGCGGCG TGCTGCCGATGCCCT bioF 749365 - 750519 + | 8-amino-7-oxononanoate synthase bioC 750506 - 751261 + | biotin biosynthesis protein BioC bioD 751254 - 751931 + | dithiobiotin synthetase TERM 939 752727 - 752712 - g 72 -4.6 -4.63218 | opp_overlap 752713, overlap 752713 TTGCGCCCAACAAAA CGCTGG CGGC CCAGCT GTATGGCGAAATGAA TERM 940 753318 - 753308 - g 70 -6.8 -4.1421 | GAGATCAAAGAAGAA CTGG CCG CCAG ACGCAAAGTGCTGTT TERM 941 753361 - 753347 - g 75 -5.7 -4.67697 | overlap 753340 753349 TTGGAAAACAACAAA CTGCT GGAAG AGCAG CGGCTGACCCAGCGT uvrB 752510 - 754531 + | excinuclease ABC subunit B TERM 942 754622 - 754680 + T 87 -9.5 -4.21607 | gap 1, opp_overlap 754645 754646, overlap 754622 GCAATATATTGAATT -TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCAC TTTGTCTTCAATAGG TERM 943 754622 - 754679 + T 100 -15.5 -3.12482 | opp_overlap 754645 754646, overlap 754622 GCAATATATTGAATT TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCA CTTTGTCTTCAATAG ybhK 755631 - 754723 - | putative structural protein moaA 756028 - 757017 + | molybdenum cofactor biosynthesis protein A moaB 757039 - 757551 + | molybdopterin biosynthesis protein B moaC 757554 - 758039 + | molybdenum cofactor biosynthesis protein C moaD 758032 - 758277 + | molybdopterin synthase small subunit TERM 944 758551 - 758561 + G 80 -5.4 -4.89852 | GGAATTATGGCCGGG CGAT GAA ATCG TTTTTGTCGGTGTCA MoaE 758279 - 758731 + | molybdopterin synthase large subunit TERM 945 758708 - 758731 + F 76 -2.3 -5.4505 | overlap 758715 GCCCGGGAGAGCGAT CTGCAGGCG GCAAAA CGCTGGTAG TTTTTTGTTAGCCGG ybhL 758868 - 759572 + | hypothetical protein TERM 946 759592 - 759610 + F 100 -8.1 -5.84381 | TTTTCACCATCACTA TCCCGGC CATGT GTCGGGA TTTTTTTCTTACTAA TERM 947 759692 - 759722 + F 70 -4.8 -4.42851 | opp_overlap 759699, overlap 759687 AATCGTTTTCCGTAT CCATAAATACAAAA GTA TTTTGTATGCGTGG TTTTAAATTTATTGA TERM 948 760097 - 760124 + G 85 -7 -4.76041 | gap 1 TGTATATGCCATTAT CATCGTGTTCAGC ACT GC-GGGCGCGATG TTTTTAATCAGTATG ybhM 759777 - 760490 + | hypothetical protein ybhN 761482 - 760526 - | hypothetical protein TERM 949 761231 - 761245 + g 90 -11.4 -3.86015 | opp_overlap 761221 761219 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA ybhO 762723 - 761482 - | cardiolipin synthase 2 ybhP 763481 - 762720 - | hypothetical protein TERM 950 762773 - 762810 + g 77 -6.2 -4.62783 | gap 1, overlap 762776 762776 AAAGGTGTCGCCATG TCCGCAGCGGCAACGCG GTTGG CGCGCTGGCGCTG-GCA TTTTTGACGTAGATC ybhQ 763614 - 764024 + | hypothetical protein ybhR 765092 - 763986 - | hypothetical protein TERM 951 764918 - 764952 + g 70 -10 -3.21912 | GTTCCACCGAATGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTAGTCACTTCCAGC ybhS 766236 - 765103 - | hypothetical protein ybhF 767980 - 766229 - | putative ATP-binding component of a transport system TERM 952 767085 - 767069 - G 70 -5.1 -4.41302 | CAGCAAATCAATAAA CGCATCT TCA AAACGCG GCGTAGTTTCGTTGA TERM 953 767723 - 767744 + g 93 -8.7 -4.7373 | gap 1, opp_overlap 767717, overlap 767723 767725 CGGCATATAGCCGAG C-ACGGCGTG CAG CGCGCCGTCG TTTTTGATCGGATCA TERM 954 767725 - 767741 + g 80 -11.5 -3.28472 | opp_overlap 767717, overlap 767723 767723 GCATATAGCCGAGCA CGGCGTG CAG CGCGCCG TCGTTTTTGATCGGA S0786 768956 - 767958 - | hypothetical protein ybiH 769639 - 768956 - | putative DNA-binding transcriptional regulator TERM 955 769570 - 769582 + g 81 -4.8 -5.09173 | opp_overlap 769556 769557 ACTGCGCCAGTGCGG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 956 769640 - 769663 + H 73 -9.8 -3.37354 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCCATATG rhlE 769856 - 771076 + | ATP-dependent RNA helicase RhlE TERM 957 771138 - 771169 + T 75 -10 -3.53012 | opp_overlap 771148, overlap 771139 TTGCATGCTTTTGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTCACAACAAGCAC TERM 958 771139 - 771168 + T 81 -13.5 -2.71712 | opp_overlap 771148, overlap 771138 TGCATGCTTTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTCACAACAAGCA ybiA 771732 - 771250 - | hypothetical protein TERM 959 772107 - 772084 - g 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT GAGT ACCGCCAACG TGGCGTTGCAGGATC dinG 771852 - 774002 + | ATP-dependent DNA helicase DinG TERM 960 773985 - 773998 + F 71 -9.5 -3.25223 | opp_overlap 773981 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 961 774058 - 774085 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 774056 774054 774058 774077 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC ybiB 774030 - 774992 + | hypothetical protein TERM 962 775004 - 775027 + F 95 -12.5 -4.07568 | TTAATTTTTATCTCA GCCGGATGA GCCACG TCATCCGGC TTTTACCCCACCGCA ybiC 775133 - 776218 + | hypothetical protein TERM 963 776246 - 776225 - T 100 -13.7 -5.81412 | GCCAGCTAAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT TERM 964 776370 - 776403 + T 70 -9.5 -3.07344 | opp_overlap 776380 776382 776383, overlap 776382 776383 GGTTCGGATTTTGTA GGCCTGATAAGACGC GGTA GCGTCGCATCAGGCA TCTGTTGCCGGATGC ybiJ 776707 - 776447 - | hypothetical protein TERM 965 776580 - 776598 + g 71 -3.1 -4.79657 | overlap 776566 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 966 776757 - 776772 + r 83 -4 -5.40072 | overlap 776758 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTACGAGAGA ybiI 777238 - 776972 - | hypothetical protein ybiX 777989 - 777312 - | putative hydroxylase TERM 967 777392 - 777408 + g 73 -3.7 -4.87786 | overlap 777394 TTTCACCATAGCGGC TTTTCAG CGA CTGAATA TTTTTGTCCAGTTCA TERM 968 778023 - 778006 - H 100 -12.7 -4.58283 | CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ATCTGAATCAGAAAT TERM 969 779972 - 779962 - H 71 -6.8 -4.07124 | CACCACGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 970 780097 - 780072 - H 72 -9.1 -3.61398 | opp_overlap 780072 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 971 780072 - 780097 + H 100 -9.8 -5.61596 | opp_overlap 780072 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT S0797 780105 - 781433 + | IS4 orf TERM 972 781444 - 781415 - T 89 -9.3 -4.59109 | overlap 781417 781438 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACCCACGCCGGGGA TERM 973 781442 - 781417 - T 100 -16.3 -3.90762 | overlap 781415 781438 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACCCACGCCGGG TERM 974 782001 - 781980 - T 74 -7.3 -4.23434 | opp_overlap 781980 CAAAACAGGCGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT ybiM 782420 - 782016 - | hypothetical protein TERM 975 782084 - 782102 + g 71 -3 -4.86033 | overlap 782085 TAATGACATAACCTT TCGCGC CTTGTTC GCGCGC TTTTTCTGCCAGTTT TERM 976 782258 - 782268 + g 71 -3.2 -4.77036 | CGGTGGCAATCAGTA GTGT GAG GCAC TTTTTCATAATGACA ybiN 782471 - 783478 + | putative SAM-dependent methyltransferase TERM 977 784693 - 784743 + T 83 -2.4 -5.63517 | opp_overlap 784689 784687 784690 784700 784701, overlap 784700 GCGGATAAACAGGCT GAAAAAAGCCAGCGAATGCTCCGC AAA GTTGAGCATATGCTGGGTAATCTC TTTTTTATTTCGGAA TERM 978 784736 - 784700 - T 74 -3.5 -5.04987 | opp_overlap 784700 784693, overlap 784689 784687 784690 784701 AACAGGCTGAAAAAA GCCAGCGAATGCTCCGC AAA GTTGAGCATATGCTGGG TAATCTCTTTTTTAT TERM 979 785050 - 785075 + T 77 -11.1 -3.18264 | overlap 785057 TTGGAAAGCGATGGT GCGACTGCCTG CATT CAGGTTGTCGC TTAATACCTGGCCGA TERM 980 785549 - 785562 + T 100 -4.5 -5.8187 | gap 1, overlap 785541 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTGTTCGATA glnQ 786682 - 785960 - | glutamine ABC transporter ATP-binding protein glnP 787338 - 786679 - | glutamine ABC transporter permease protein TERM 981 787483 - 787500 + r 83 -4.1 -5.33866 | overlap 787484 GTAGCGTTATTATTT CGGTTCA GTAC TGAACCA TTTTTTGTAGATTTC glnH 788223 - 787477 - | glutamine ABC transporter periplasmic protein TERM 982 788342 - 788332 - R 80 -6.8 -4.59109 | opp_overlap 788332 788331 GAGATGCGGCAAAAA CGTG ATG CACG ATTTATAGGGCAATA TERM 983 788409 - 788367 - R 80 -12.8 -3.06315 | opp_overlap 788374 788408, overlap 788404 GCAATACCCTGAAGA TGCACCATTCTGGGGCACCA ATC TGGTGCGCTAAAATTGTGCA CTCAACACAGTGATT TERM 984 788470 - 788451 - R 77 -3.6 -5.16237 | opp_overlap 788451 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATGTGGAT TERM 985 788564 - 788586 + r 79 -7.6 -4.40804 | opp_overlap 788565, overlap 788565 GGGCTGCAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGGGTACTA TERM 986 788585 - 788565 - R 100 -13.3 -5.07652 | opp_overlap 788564 788565 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT TERM 987 788565 - 788585 + r 77 -11.1 -3.24 | opp_overlap 788565, overlap 788564 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT dps 789130 - 788627 - | DNA starvation/stationary phase protection protein Dps TERM 988 789034 - 789049 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTGTC TERM 989 789420 - 789391 - R 95 -13.1 -3.96827 | opp_overlap 789388, overlap 789414 AAAAGTAGCGAGAAA TTCTGCATGGTTA TGCA TAACCATACAGAA ATGTAAATTTAATTA ybiF 790316 - 789429 - | threonine and homoserine efflux system TERM 990 790508 - 790492 - H 79 -9.5 -3.72315 | opp_overlap 790491 790492, overlap 790490 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 790669 - 791184 + | outer membrane protein X TERM 991 791199 - 791228 + T 100 -12.3 -4.70879 | opp_overlap 791205, overlap 791205 ATCACTTTGGTGATA TAAAAATCCGCCT CTCG GGGCGGATTTTTG TTTTTAAGGTTTCGG TERM 992 791222 - 791205 - T 91 -8.4 -4.96848 | opp_overlap 791199 791205 TTGGTGATATAAAAA TCCGCC TCTCGG GGCGGA TTTTTGTTTTTAAGG TERM 993 791205 - 791222 + T 100 -9.1 -5.61881 | opp_overlap 791205, overlap 791199 TTGGTGATATAAAAA TCCGCCT CTCG GGGCGGA TTTTTGTTTTTAAGG ybiP 792815 - 791232 - | putative enzyme TERM 994 791631 - 791656 + g 70 -4.7 -4.50159 | TAAATCGTCCGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTCGATTGCA TERM 995 792786 - 792771 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGATTCTTTG TERM 996 793066 - 793089 + H 76 -8.1 -4.05322 | opp_overlap 793068, overlap 793068 ATAAAAGCAGGAGTG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCTGAAGGTTT TERM 997 793087 - 793068 - H 74 -10.7 -3.12803 | opp_overlap 793066 793068 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCTGAAGGT TERM 998 793068 - 793087 + H 79 -10.7 -3.615 | opp_overlap 793068, overlap 793066 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCTGAAGGT S0810 793401 - 793868 + | manganese transport regulator MntR TERM 999 794126 - 794138 + G 70 -6.9 -4.04319 | overlap 794120 ATGTTTATGGTGCTG GCGGC GGC GCTGC TTTCTACCTTTCTGA ybiR 793865 - 794983 + | hypothetical protein TERM 1000 794997 - 795025 + T 95 -11.1 -4.4267 | opp_overlap 795002, overlap 795002 AAGGTCTGGCAAATA AAAAAGGCGGATT ATG AGTCCGCCTTTTG TTTTACGTTTTGACG TERM 1001 795002 - 795020 + T 100 -11 -5.14698 | opp_overlap 795002, overlap 794997 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTTGTTTTACGTTT TERM 1002 795020 - 795002 - T 100 -8.8 -5.63517 | opp_overlap 794997 795002 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTTGTTTTACGTTT ybiS 795962 - 795042 - | hypothetical protein ybiT 796181 - 797773 + | putative ATP-binding component of a transport system TERM 1003 797858 - 797834 - T 72 -8.5 -3.79633 | overlap 797832 GACAAATGCAAAATA GCCTGATGCGC TAC GCTTATCAGGC CTACGCAGTACCTGT ybiU 799279 - 798014 - | hypothetical protein TERM 1004 798117 - 798127 + g 88 -8.2 -4.62069 | CGCGGGAAGTCGCCC GGCG ATG CGCC TTTTTCCAGTGCGGC TERM 1005 798659 - 798622 - G 74 -7.6 -4.08394 | overlap 798610 798623 AGACGTTGGCGAAAA CGTGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGCC CCGGAGTCGGTATGC TERM 1006 798658 - 798623 - G 72 -11.1 -3.04715 | overlap 798622 GACGTTGGCGAAAAC GTGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGC CCCGGAGTCGGTATG TERM 1007 799422 - 799404 - R 100 -11.7 -4.43173 | AAAAAGAAGGGAAAA CCGGAGC GCATG GCTCCGG TAGAGAGGTCAGCTG S0815 800246 - 799431 - | hypothetical protein ybiW 802824 - 800392 - | putative formate acetyltransferase TERM 1008 800679 - 800691 + g 71 -9.1 -3.55444 | opp_overlap 800677 CGCCGCCGAGAATCG CTGCC GTA GGCAG TTTACCCACTGAGCC TERM 1009 802375 - 802389 + g 71 -2.8 -4.77438 | opp_overlap 802371 CGCTTTAATGATGCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT ybiY 803756 - 802830 - | putative pyruvate formate-lyase 2 activating enzyme TERM 1010 803095 - 803108 + g 79 -3.7 -5.11033 | overlap 803092 ATAATGATTTTTTTG CCCGC TGCG GCGAG TTTTTTCAGGTTATC TERM 1011 803291 - 803274 - G 76 -12.7 -2.52834 | overlap 803273 TACCGCAGTATGAAT GCCTGCC TCGT GGCAGGC TTGCAGCAGCGCCGT mipB 803860 - 804522 + | fructose-6-phosphate aldolase TERM 1012 804628 - 804668 + T 77 -10.3 -3.37474 | opp_overlap 804621 804622 804654 804655, overlap 804629 804659 CCAGATAAGGCGTTC ACGCCGCATCTGGCGTCTG GAG CAAATGCCTGATGCGACGC TTGTCGCGTCTTATC TERM 1013 804629 - 804667 + T 83 -13.8 -2.62003 | opp_overlap 804621 804622 804654 804655, overlap 804628 804659 CAGATAAGGCGTTCA CGCCGCATCTGGCGTCTG GAG CAAATGCCTGATGCGACG CTTGTCGCGTCTTAT TERM 1014 804688 - 804654 - T 72 -8.5 -3.72576 | opp_overlap 804629 804628 804659, overlap 804622 804655 GGCGTCTGGAGCAAA TGCCTGATGCGACGC TTGTC GCGTCTTATCAGGCT TGGAGGTGGCAATTA TERM 1015 804687 - 804655 - T 77 -12 -2.83403 | opp_overlap 804629 804628 804659, overlap 804622 804654 GCGTCTGGAGCAAAT GCCTGATGCGACGC TTGTC GCGTCTTATCAGGC TTGGAGGTGGCAATT TERM 1016 804659 - 804678 + T 73 -10 -3.33261 | opp_overlap 804622 804655 804654, overlap 804629 804628 CTGGAGCAAATGCCT GATGCGAC GCTT GTCGCGTC TTATCAGGCTTGGAG moeB 805450 - 804701 - | molybdopterin biosynthesis protein MoeB TERM 1017 804789 - 804820 + g 79 -10.1 -3.79668 | opp_overlap 804781 TACATGACGATTTTC CCGCTGGCCGGTT TGCCAT AACCTGCCAGCAG TTTGATCGCTTCCAT moeA 806685 - 805450 - | molybdopterin biosynthesis protein MoeA TERM 1018 805794 - 805782 - G 78 -10.5 -3.53444 | TCAGCGTCGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 1019 805988 - 805978 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGTGGATCGT TERM 1020 806152 - 806142 - G 87 -4.6 -5.252 | CACCGGTAGAAAAAA GCGC TAC ACGC ACTTTACGAATCACC TERM 1021 806594 - 806582 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG AAC CAGTG GCAGCGTTTCCTGGG TERM 1022 807553 - 807567 + G 70 -5.6 -4.30719 | opp_overlap 807554, overlap 807554 GATGCTACGCCAATA ACGCCA GTG TGGCGG TTTCTTGTACCGGCA TERM 1023 807566 - 807554 - g 73 -9.1 -3.65224 | opp_overlap 807553 807554 ATGCTACGCCAATAA CGCCA GTG TGGCG GTTTCTTGTACCGGC ybiK 806889 - 807854 + | L-asparaginase TERM 1024 808369 - 808345 - g 77 -11.4 -3.15544 | opp_overlap 808341 808359 CGTTATTCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG S0822 807874 - 809712 + | glutathione transporter ATP-binding protein TERM 1025 811200 - 811184 - g 71 -3 -4.82901 | gap 1 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG S0823 809732 - 811270 + | putative transport protein TERM 1026 811709 - 811734 + G 71 -3.2 -4.87291 | overlap 811697 CGGTGTCGGGGATCT CGTTTCCGGC ATTTGC GCTGGGGATG TTTTTAATTCAGGTA TERM 1027 812113 - 812125 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT S0824 811288 - 812208 + | putative transport system permease protein S0825 812211 - 813122 + | putative transport system permease protein TERM 1028 813262 - 813233 - f 78 -6.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACTATTT TTGCAGCGGC ACAGCGTTCAGATAG TERM 1029 815241 - 815228 - f 70 -2.3 -4.95484 | CATCATGAAAGAAAA TGGCC TGAA GGCGA ACAGCCTCTGTGTTG TERM 1030 815681 - 815692 + G 79 -4.4 -4.95806 | overlap 815690 AGTTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT TERM 1031 816215 - 816205 - g 72 -8.2 -3.72051 | overlap 816198 TTTAAGAACGGTAAA CCGG TGA CCGG TGATGAATATAATGC S0827 815650 - 816978 + | hypothetical protein TERM 1032 817027 - 816979 - T 71 -9.8 -3.1505 | gap 1, opp_overlap 816963 816987 816991, overlap 816982 ATTAGCTGGCAGTAA TCATTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAATTA AACCCGGCTACCCCA TERM 1033 817024 - 816982 - T 74 -11.5 -2.78018 | gap 1, opp_overlap 816987 816991, overlap 816979 AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC TERM 1034 816987 - 817020 + T 73 -9.5 -3.33696 | opp_overlap 816982 816979, overlap 816991 GCAGTAATCATTATT CGCAGGCCGGACAAA TGAT TTTGCCCGGCCTGAA TTAATTAAACCCGGC TERM 1035 816991 - 817016 + T 81 -13.3 -2.60244 | opp_overlap 816982 816979, overlap 816987 TAATCATTATTCGCA GGCCGGACAAA TGAT TTTGCCCGGCC TGAATTAATTAAACC yliG 818350 - 817025 - | hypothetical protein TERM 1036 818330 - 818318 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 818563 - 818946 + | biofilm formation regulatory protein BssR TERM 1037 818942 - 818986 + T 76 -5 -4.84359 | opp_overlap 818950 818954, overlap 818950 818951 818954 CCATGCTTGAGAAGG CCTGAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 1038 818978 - 818950 - T 83 -9.6 -4.12198 | opp_overlap 818950 818942 818951 818954, overlap 818954 GAGAAGGCCTGAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1039 818951 - 818978 + T 72 -9.3 -3.59063 | gap 1, opp_overlap 818950 818954, overlap 818950 818942 818954 AGAAGGCCTGAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1040 818954 - 818974 + T 88 -12.6 -3.48703 | opp_overlap 818950 818954, overlap 818951 818950 818942 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1041 818974 - 818954 - T 93 -12.6 -3.67175 | opp_overlap 818954 818951 818950 818942, overlap 818950 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1042 819522 - 819534 + T 75 -2.7 -5.16841 | CGGCTGGTATTCGAC GGTAA AGG TTATC TTTTTATTGCTCTGG TERM 1043 819576 - 819563 - T 70 -9.5 -3.10579 | overlap 819560 GGGCGAAAACAATCA GCGCC CGAC GGCGC AGGATCTGGATAAAT TERM 1044 819818 - 819803 - T 70 -2.4 -4.92239 | overlap 819807 GCAAAAAGGCAAAAA CTACGG CTGG CCGCTG GCAACCTGGGGAATC yliJ 820800 - 820168 - | putative transferase TERM 1045 821072 - 821087 + H 84 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT S0833 822062 - 822364 + | IS600 orfA S0834 822505 - 823218 + | IS600 orfB TERM 1046 823544 - 823520 - T 82 -12.1 -3.30159 | opp_overlap 823520 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT TERM 1047 823520 - 823544 + T 90 -13.6 -3.39862 | opp_overlap 823520 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT deoR 824313 - 823555 - | DNA-binding transcriptional repressor DeoR TERM 1048 824065 - 824076 + g 79 -3.6 -5.06414 | overlap 824067 TGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG ybjG 824967 - 824371 - | undecaprenyl pyrophosphate phosphatase TERM 1049 824749 - 824739 - G 72 -5.4 -4.56597 | overlap 824741 GGTCGTGCGGAAAAA GATG TCC CATC GTCCAGGACACAAAC cmr 825252 - 826478 + | chloramphenicol resistance pump Cmr TERM 1050 826484 - 826510 + T 70 -8.8 -3.37464 | opp_overlap 826484 CGAAGGGTAAAAAAA TGCCTGATTG ATTTGTG CGATCAGGCA TTCTCGAATTAATGG TERM 1051 826510 - 826484 - T 91 -6.6 -5.47399 | opp_overlap 826484 CGAAGGGTAAAAAAA TGCCTGATTG ATTTGTG CGATCAGGCA TTCTCGAATTAATGG ybjH 826803 - 826519 - | hypothetical protein S0840 827677 - 826889 - | hypothetical protein S0841 828912 - 827704 - | putative DEOR-type transcriptional regulator TERM 1052 828492 - 828479 - G 71 -3.1 -4.85599 | gap 1 CCCAGGCTATAAAAA CCG-TG CAT CATCGG CAAAACCGTTTTATT S0842 828996 - 829532 + | putative DEOR-type transcriptional regulator TERM 1053 829594 - 829558 - T 85 -3.7 -5.60689 | TTAGATAACAAAAAA CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG CTCCACAAAATGGGG TERM 1054 829653 - 829623 - T 74 -3.3 -4.97158 | gap 1, opp_overlap 829650 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG S0843 831392 - 829707 - | hypothetical protein TERM 1055 830291 - 830277 - G 83 -10 -4.09108 | opp_overlap 830276 830275 830273 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACGCG TERM 1056 830557 - 830596 + g 72 -7.8 -3.85817 | GGATCGAGTCGGGCA TGGGCGTCGGGATAGCCT ACCA ACGCTATTTCATCGCCCA TTTGTAGCACGGCAT ybjM 831662 - 832039 + | hypothetical protein TERM 1057 832065 - 832033 - T 90 -6.9 -5.40625 | opp_overlap 832041, overlap 832041 ACAGCACAGAAAAAA TCAGTAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 1058 832057 - 832041 - T 80 -10.1 -3.98747 | opp_overlap 832041, overlap 832033 GAAAAAATCAGTAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG TERM 1059 832069 - 832081 + T 71 -3.3 -4.87133 | opp_overlap 832069 GGGCTTGTCAGACGA TCAGG CGT CCAGA TTTTCTTTCACCCAT grxA 832326 - 832069 - | glutaredoxin 1 ybjC 832486 - 832773 + | hypothetical protein mdaA 832757 - 833479 + | nitroreductase A TERM 1060 834004 - 834057 + G 76 -11 -3.27475 | gap 1, opp_overlap 834024, overlap 834002 834005 834024 CGTCGTGCTGGCGGA GACTCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 1061 834005 - 834056 + G 90 -14.5 -2.56271 | gap 1, opp_overlap 834024, overlap 834004 834002 834024 GTCGTGCTGGCGGAG ACTCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 833540 - 834442 + | ribosomal protein S6 modification protein ybjN 834530 - 835006 + | putative sensory transduction regulator TERM 1062 835014 - 835057 + F 93 -14 -3.65046 | gap 1, opp_overlap 835010 835011, overlap 835014 TCCACTGATAATTCC TTTCG-AGCACGCAGTCGCTG CCG CAGTGACTGCGCGCTGCAAAA TTATCTGCTGTTTTT TERM 1063 835014 - 835056 + F 84 -14.2 -2.77401 | opp_overlap 835010 835011, overlap 835014 TCCACTGATAATTCC TTTCGAGCACGCAGTCGCTG CCG CAGTGACTGCGCGCTGCAAA ATTATCTGCTGTTTT TERM 1064 835300 - 835282 - f 82 -3.2 -5.60993 | opp_overlap 835282 GCGCCGATAAAAAAA TATGCA CGTTTAT TGCATA TCTTTCAGTGTGACA TERM 1065 836327 - 836315 - g 72 -6.9 -4.20918 | GTCAACGCCAATAAA GCAGC CAC GCCGC TGGTGAGTGCGGAAG potF 835358 - 836470 + | putrescine ABC transporter periplasmic substrate-binding protein TERM 1066 837132 - 837113 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 836565 - 837698 + | putrescine transporter ATP-binding subunit potH 837708 - 838661 + | putrescine ABC transporter membrane protein TERM 1067 839199 - 839209 + G 71 -3.2 -4.81083 | ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTCGTCATTACG potI 838658 - 839503 + | putrescine ABC transporter membrane protein TERM 1068 839533 - 839557 + F 95 -12.2 -4.25104 | opp_overlap 839536, overlap 839536 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG TERM 1069 839554 - 839536 - f 86 -11.7 -3.48772 | opp_overlap 839533 839536 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG TERM 1070 839536 - 839554 + F 95 -11.7 -4.25256 | opp_overlap 839536, overlap 839533 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG ybjO 839563 - 840051 + | hypothetical protein rumB 840092 - 841219 + | 23S rRNA methyluridine methyltransferase TERM 1071 841237 - 841224 - T 88 -5.9 -5.5604 | TGAAGCAATAAAAAA GCCAC AGGT GCGGC TTCAGATTGCTGATC artJ 842125 - 841394 - | arginine 3rd transport system periplasmic binding protein TERM 1072 841743 - 841767 + g 77 -7.2 -4.46757 | TTTTCCATCCCAATG CGTTTGCC TTTCAGGTC GGCAAACG TTTTGTAGGTATCTT TERM 1073 842248 - 842274 + r 85 -12.4 -3.4489 | opp_overlap 842248 AATGAAATAAAAAAA GACGGATAACTT AGT GAGTTGTCCGTC TTCATTATAAGAATT TERM 1074 842274 - 842248 - R 100 -9.5 -6.01187 | opp_overlap 842248 AATGAAATAAAAAAA GACGGATAACT TAGTG AGTTGTCCGTC TTCATTATAAGAATT artM 843085 - 842417 - | arginine transporter permease subunit ArtM artQ 843801 - 843085 - | arginine transporter permease subunit ArtQ TERM 1075 843637 - 843610 - G 70 -5.6 -4.33956 | gap 1, overlap 843612 843615 GCCAAAATAGATAAA CAGCACTACCAGA ATT TCTGGCAG-GCCA CGCAGAATGGTTACC TERM 1076 843635 - 843612 - G 72 -8.2 -3.75733 | gap 1, overlap 843610 843615 CAAAATAGATAAACA GCACTACCAGA ATT TCTGGCAG-GC CACGCAGAATGGTTA TERM 1077 843757 - 843747 - G 74 -8.2 -3.99898 | opp_overlap 843753, overlap 843748 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 844539 - 843808 - | arginine 3rd transport system periplasmic binding protein artP 845285 - 844557 - | arginine transporter ATP-binding subunit ybjP 846018 - 845503 - | putative lipoprotein S4813 846214 - 846032 - | hypothetical protein TERM 1078 847480 - 847465 - g 74 -3.2 -4.88405 | opp_overlap 847465 AATTTTGAAACAAAA CCTGTT CATT ATCAGG ATTTATTAACACGAT S4814 846667 - 848436 + | hypothetical protein S0862 848646 - 848969 + | hypothetical protein S0863 848966 - 849796 + | putative regulator S0864 850842 - 849793 - | putative nucleotide di-P-sugar epimerase or dehydratase TERM 1079 849929 - 849957 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGGCGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 852335 - 850905 - | putative dTDP-glucose enzyme TERM 1080 851422 - 851435 + g 84 -3.8 -5.20606 | TCGTAGCCCCAGTCG CTGG AGTTGA CCAG TTTTTCTTCCTCTTT ybjU 853347 - 852346 - | L-threonine aldolase poxB 855102 - 853384 - | pyruvate dehydrogenase TERM 1081 855225 - 855200 - R 82 -11.9 -3.38581 | overlap 855198 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATAAGGCGATTATGC S0868 856203 - 855235 - | HCP oxidoreductase, NADH-dependent TERM 1082 855841 - 855829 - G 70 -10.5 -2.71119 | overlap 855811 855828 ACGCATCGACATAAT CGGCG TGA CGCCG CAGCCTGCCGCCAGC ybjW 857867 - 856215 - | hydroxylamine reductase TERM 1083 858041 - 858026 - R 72 -3.2 -4.99035 | overlap 858028 TTACGCAGAGAAAAA GGCGAT GAGG ATCGGC ACTAACAGGCTAAGA ybjE 858958 - 858011 - | putative surface protein S0871 859939 - 859034 - | insertion element IS2 transposase InsD S0872 860262 - 859897 - | insertion sequence 2 OrfA protein aqpZ 861398 - 860703 - | aquaporin Z TERM 1084 861291 - 861273 - G 95 -12.4 -4.06903 | opp_overlap 861288 AACGGTCAAACCAAA TGCCAGCG CCA CGCCGGCA AAACCAATGCCTAAT S0874 861953 - 861450 - | IS1 orfB S0875 862147 - 861872 - | IS1 orfA ybjD 862599 - 864257 + | hypothetical protein ybjX 865246 - 864254 - | putative enzyme TERM 1085 864279 - 864328 + g 90 -6.6 -5.14965 | gap 3, overlap 864281 864282 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT TERM 1086 864282 - 864326 + g 73 -11.6 -2.80472 | gap 2, overlap 864281 864279 ATCGTGGCCATTTGT GGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC CGTTTTTTACTGGCG TERM 1087 865087 - 865076 - G 71 -3 -4.7373 | CGAGCGCAGCAAAAA TTTC TGGC GAAA ACTACAGCGATGCCA S0878 865361 - 866476 + | macrolide transporter subunit MacA TERM 1088 866701 - 866739 + G 72 -4.6 -4.65263 | gap 3, opp_overlap 866687, overlap 866706 ATTGCCACGCTGGAC GCCG--ATGCGC-TGGCGC AACT GCGCCGCGAGCATTTCGGC TTTATTTTCCAGCGT TERM 1089 867508 - 867496 - g 75 -5.5 -4.66163 | overlap 867499 ATCGCCATCCAAAAA CAACC GTG GGTCG CCTCAGCCACACCTG TERM 1090 867740 - 867772 + G 85 -13.5 -3.25823 | ATGTGGTTGGCGAGG TGATTCTGGTCGGCA ATA TGCCCGCCAGAGTCA TTGGTGTGGCGGAAG ybjZ 866473 - 868419 + | macrolide transporter ATP-binding /permease protein TERM 1091 868435 - 868455 + T 95 -12.6 -4.35926 | opp_overlap 868435 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT TERM 1092 868455 - 868435 - T 100 -12.6 -4.96848 | opp_overlap 868435 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT cspD 868716 - 868492 - | stationary phase/starvation inducible regulatory protein CspD TERM 1093 869151 - 869161 + G 77 -6.8 -4.45738 | opp_overlap 869151 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG clpS 869039 - 869359 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1094 869367 - 869354 - f 88 -8.1 -4.85599 | TGTACGCTAGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1095 871572 - 871532 - g 90 -6.8 -5.11033 | opp_overlap 871534 GACAACCTGAAAAAA CCGCTCGCCAACGAAC TGCTGTTTG GTTCGCTGGTGGACGG CGGTCAGGTGACGGT clpA 869390 - 871666 + | ATP-dependent Clp protease ATP-binding subunit TERM 1096 871692 - 871719 + T 100 -12.8 -5.38054 | AGGTAGGTTGGTGAA GTCCGTAATCTC GTCA GGGGTTACGGAC TTTTTATTTATGGGG TERM 1097 872055 - 872036 - T 100 -10 -5.82388 | opp_overlap 872036 872034 AAATGCGAAAAAAAA GCTCGCAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1098 872351 - 872367 + T 79 -7.9 -4.40037 | opp_overlap 872351 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT TERM 1099 872367 - 872351 - T 100 -10.1 -5.56263 | opp_overlap 872351 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT infA 872628 - 872410 - | translation initiation factor IF-1 aat 873617 - 872913 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1100 873494 - 873482 - G 81 -6.3 -4.7329 | overlap 873485 AAAACCACGGAAAAA TACCA CGC TGGTA AGCCATTAACAGGCG cydC 875380 - 873659 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 877147 - 875381 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1101 877244 - 877210 - R 74 -3.4 -5.06103 | opp_overlap 877211 877214, overlap 877214 877215 ACAACGGGGAAAAAA TAAAGGCGACCCATAG TCG CAAGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1102 877240 - 877214 - R 83 -6.4 -5.04249 | opp_overlap 877211 877214, overlap 877210 877215 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT TERM 1103 877214 - 877240 + r 72 -6.4 -4.25231 | opp_overlap 877214 877210 877215, overlap 877211 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT trxB 878235 - 877270 - | thioredoxin reductase TERM 1104 878098 - 878115 + g 81 -6.9 -4.66163 | overlap 878085 TTCCACTTCCGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT lrp 878779 - 879273 + | leucine-responsive transcriptional regulator TERM 1105 879327 - 879363 + F 79 -8.8 -4.13767 | gap 1, opp_overlap 879329 879333, overlap 879330 879333 TCCTGTTAATCCATA CAG-CAACAGTACTGGG GTAA CCTGGTACTGTTGTCCG TTTTAGCATCGGGCA TERM 1106 879330 - 879359 + F 83 -13.7 -2.75577 | opp_overlap 879329 879333, overlap 879327 879333 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG TERM 1107 879333 - 879356 + F 75 -9.6 -3.52113 | opp_overlap 879329 879333, overlap 879330 879327 TAATCCATACAGCAA CAGTACTGGG GTAA CCTGGTACTG TTGTCCGTTTTAGCA TERM 1108 881116 - 881079 - g 74 -3.2 -5.00616 | opp_overlap 881085 881090, overlap 881037 881080 881081 881083 TCTGGCGTGAAAAAA GCGACACTGGCGACGG GGGCTG CCGCAACCGTTGCCGC GCCAGTCTTCAGTCT ftsK 879408 - 883436 + | DNA translocase FtsK lolA 883588 - 884202 + | outer-membrane lipoprotein carrier protein ycaJ 884213 - 885556 + | recombination factor protein RarA serS 885647 - 886939 + | seryl-tRNA synthetase TERM 1109 886965 - 886979 + F 100 -9.2 -5.72616 | opp_overlap 886965 TTCTGAATCTAAAAA GCGCCT TTA GGGCGC TTTTTTTGTCTCCCT TERM 1110 886979 - 886965 - f 88 -8.5 -4.74103 | opp_overlap 886965 TTCTGAATCTAAAAA GCGCC TTTAG GGCGC TTTTTTTGTCTCCCT TERM 1111 888115 - 888102 - g 73 -3.8 -4.78107 | CATGATCACTAAAAA CCTG GTGGAT CAGG CATTCCTCGATAAAT dmsA 887266 - 889623 + | anaerobic dimethyl sulfoxide reductase subunit A dmsB 889634 - 890251 + | anaerobic dimethyl sulfoxide reductase subunit B dmsC 890253 - 891044 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1112 891050 - 891077 + T 83 -6.2 -5.04733 | opp_overlap 891055, overlap 891055 CGCAAGCTAATCAGT AACAACCGGGGT TTCG GCCCCGGTTCTC TTTTATTTCTGCTTC TERM 1113 891072 - 891055 - T 79 -9.8 -3.77722 | opp_overlap 891055 891050 GCTAATCAGTAACAA CCGGGG TTTCGG CCCCGG TTCTCTTTTATTTCT TERM 1114 891055 - 891072 + T 87 -10.5 -4.14927 | opp_overlap 891055, overlap 891050 GCTAATCAGTAACAA CCGGGGT TTCG GCCCCGG TTCTCTTTTATTTCT ycaC 891706 - 891080 - | hypothetical protein ycaD 892021 - 893169 + | MFS family transporter TERM 1115 893211 - 893180 - f 71 -9.6 -3.26596 | opp_overlap 893180, overlap 893185 TGTAAATGAATTCAA GCAAAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1116 893180 - 893211 + F 100 -7.4 -5.82036 | opp_overlap 893180 893185 TGTAAATGAATTCAA GCAAAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1117 893478 - 893451 - f 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 1118 893818 - 893830 + G 73 -9.1 -3.62046 | opp_overlap 893811 GCTAAGCAGGCATTA CAGCC TGG GGCTG TTGTTGCCCGGATCG S0899 893482 - 894156 + | ISSfl3 orfA S0900 894153 - 894503 + | ISSfl3 orfB TERM 1119 894731 - 894694 - g 70 -6.2 -4.1585 | overlap 894695 894699 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 1120 894753 - 894736 - g 82 -9.1 -4.19238 | overlap 894749 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA S0901 894500 - 896101 + | ISSfl3 orfC,D TERM 1121 897049 - 897060 + T 74 -5.8 -4.63218 | opp_overlap 897045 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S0905 897809 - 897507 - | IS911 orfA S0906 897996 - 897790 - | putative bacteriophage protein S0907 898283 - 897993 - | putative bacteriophage protein S0908 898414 - 898283 - | hypothetical protein S0909 898581 - 898883 + | IS600 orfA S0910 899024 - 899737 + | IS600 orfB S0911 900148 - 899777 - | hypothetical protein TERM 1122 900646 - 900610 - R 100 -8.6 -5.74288 | gap 1, opp_overlap 900610 ATAAACAACAAAAAA CCCGCCGAAACGCTGAG AGAT CACAGCGATG-GGCGGG TTAAGTGCGGGTGCG S0912 900822 - 900724 - | host cell-killing modulation protein TERM 1123 900849 - 900864 + r 83 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 1124 900943 - 900993 + r 100 -12.1 -4.64844 | gap 1, opp_overlap 900910 CAAAGCATGAAATTG GCCTCAGATTAATGTTAAGCGTCT TGCC GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC S0913 901672 - 901106 - | hypothetical protein TERM 1125 901854 - 901869 + r 77 -11.8 -2.85402 | overlap 901862 ATGTGTGACTGCTCC CCGCCC TTTC GGGCGG TCTCCTGATGATTTG TERM 1126 902230 - 902242 + r 72 -5.5 -4.37886 | AATTAACCTGATTAC GAGGG TCA TCCTC TTTTATCGGAAATAA S0914 902776 - 902354 - | putative bacteriophage protein S0917 904321 - 903683 - | putative bacteriophage protein TERM 1127 903935 - 903955 + g 85 -8.3 -4.5852 | overlap 903936 TTTTTGATCCGTTTG TGTAACGCT GGC AGCGTTACC TTTTCGTTTCAGTTC TERM 1128 903936 - 903954 + g 80 -11.8 -3.34028 | overlap 903935 TTTTGATCCGTTTGT GTAACGCT GGC AGCGTTAC CTTTTCGTTTCAGTT TERM 1129 904334 - 904354 + r 93 -12.7 -3.68351 | CATTTGTTTTCACCT TGTAACGCT CGC AGCGTTACA TTTAACTGATACCGA S0918 904821 - 904399 - | putative bacteriophage protein S0919 905032 - 904805 - | DNA-binding transcriptional regulator DicC TERM 1130 905127 - 905117 - H 78 -5.4 -4.87626 | CCCTAATATGAAAAA CGAA ACC TTCG GTGCTCGCCTCTTAC S0920 905720 - 905875 + | hypothetical protein TERM 1131 905951 - 905931 - g 78 -7.5 -4.30441 | overlap 905932 CTAGAAGATGCAAAA CGCCTCCAG CAA CTGGAGCCA AATGCAGGCACTGGG TERM 1132 906044 - 906024 - g 88 -11.9 -3.71487 | TATGATAGCGAAGAA GCCTTCTAC AAA GCAGAAGGC CGTGCAGGATATTCA S0921 905877 - 906080 + | hypothetical protein S0922 907227 - 906322 - | insertion element IS2 transposase InsD S0923 907550 - 907185 - | insertion sequence 2 OrfA protein TERM 1133 908205 - 908218 + GH 100 -5.2 -5.64274 | opp_overlap 908205 GACTACTGCGCATAA CCGC GCTCAG GCGG TTTTTTTATGCGTCA S0924 908098 - 908637 + | putative bacteriophage protein S0925 908598 - 908945 + | hypothetical protein TERM 1134 909138 - 909118 - f 79 -10.5 -3.58726 | CTGTGTGACAGACAA GTAAGCCCT GAT AAGGCTTAC ACTGCTGAACTTATT TERM 1135 909761 - 909717 - g 100 -3 -5.60864 | gap 1, overlap 909723 GATATATTAAAAAAA TCAACAGCGTATTTTGCACAG GAGT CGCTGAAAAATACGC-GTTAA TCGAACAATGGCGAC S0927 909459 - 909761 + | IS600 orfA S0928 909902 - 910615 + | IS600 orfB S0929 911284 - 910640 - | putative exodeoxyribonuclease VIII of prophage CP-933R TERM 1136 910913 - 910934 + g 75 -5.7 -4.71828 | overlap 910915 GCAATCCTGGCAATC CTCGTGGGC GTCT GCCTGCGCG TTTTCTTCCTGGCCT TERM 1137 910943 - 910957 + g 72 -7.1 -4.21086 | overlap 910954 CTGCGCGTTTTCTTC CTGGC CTCCC GCCAG TTCTTTGGTTTCTTG TERM 1138 911351 - 911377 + r 91 -7.2 -5.49809 | overlap 911355 TCCCAGGTTCTTCAC TCAGGCCTGCAC ACT GTGCAGGCTTTC TTTTTTTCAGATTTC TERM 1139 911355 - 911373 + r 100 -14.6 -5.20328 | overlap 911351 AGGTTCTTCACTCAG GCCTGCAC ACT GTGCAGGC TTTCTTTTTTTCAGA TERM 1140 911421 - 911434 + r 82 -3.1 -5.60993 | gap 1 ATTGCAATCAGATTT GCCAGA AAT TC-GGC TTTTTTTCTGCGGGC S0930 912068 - 911628 - | IS600 orfB S0931 912785 - 912483 - | IS600 orfA S0932 912851 - 913468 + | hypothetical protein TERM 1141 913583 - 913606 + T 93 -10.2 -4.58395 | opp_overlap 913580 913579, overlap 913585 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 1142 913585 - 913604 + T 100 -15 -3.90762 | opp_overlap 913580 913579, overlap 913583 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_2 915474 - 913648 - | invasion plasmid antigen TERM 1143 915832 - 915872 + H 79 -8 -4.48072 | gap 1, opp_overlap 915830 915828 915840 915861, overlap 915836 915861 GATCAAAATCATATC T-CAATGTACTGTTTTTTT CTTT AAAAAAACAGTACATTCTA TTTTATAATGACTGT TERM 1144 915836 - 915867 + H 100 -14.8 -4.04187 | opp_overlap 915830 915828 915840 915861, overlap 915832 915861 AAAATCATATCTCAA TGTACTGTTTTTTT CTTT AAAAAAACAGTACA TTCTATTTTATAATG TERM 1145 915886 - 915861 - H 79 -2.7 -5.40072 | gap 1, opp_overlap 915836 915832 915861, overlap 915840 915830 915828 TTTTCTTTAAAAAAA CAGTACATTCTA TTT TATAATG-ACTG TGTATTCCCATGGAA TERM 1146 917312 - 917298 - g 85 -7 -4.7373 | overlap 917300 CTACTGCATGAAAAA GGCCGC TAT GCGGTC GGGCAGGGACCAATG ybhE 916356 - 917351 + | 6-phosphogluconolactonase TERM 1147 917361 - 917391 + F 79 -12 -3.27164 | gap 1, opp_overlap 917353 917364, overlap 917354 917362 917364 CACTAACCGCTGATT TA-ACCGGCGCAG TCTCTC CTGCGCCGGTGTA TTAACTTATCTCCTG TERM 1148 917362 - 917389 + F 81 -12.7 -3.19511 | opp_overlap 917353 917364, overlap 917361 917354 917364 ACTAACCGCTGATTT AACCGGCGCAG TCTCTC CTGCGCCGGTG TATTAACTTATCTCC TERM 1149 917364 - 917387 + F 100 -15.3 -3.15379 | opp_overlap 917353 917364, overlap 917362 917361 917354 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACTTATCT TERM 1150 917387 - 917364 - f 93 -15.3 -3.06133 | opp_overlap 917364 917362 917361 917354, overlap 917353 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACTTATCT TERM 1151 919056 - 919040 - g 70 -5.1 -4.4078 | overlap 919042 CCGCTGGAACGAAAA CTGGAAA AGT TTTCCCG ACTGATAATCAGATT ybhH 918634 - 919581 + | hypothetical protein TERM 1152 919642 - 919620 - f 71 -10 -3.15732 | overlap 919618 919617 ACAATCAATAAAGGA CTTCTGTATG AGT CATACAGAAA GAACAGGATTTTAAA TERM 1153 920185 - 920168 - g 79 -4.1 -5.09426 | opp_overlap 920181 920182 CCGAACCGGAAAAAA GTCCG CGTCGTGT CGGAC ATTACCTGATGATGT ybhI 919720 - 921090 + | putative membrane pump protein TERM 1154 921234 - 921257 + F 82 -13.2 -2.89055 | TCCATTTATTATCTT TCTGCGCACT TCAC GGTGCGCAGA TATCTGGAGCATTTG TERM 1155 921308 - 921294 - g 81 -7 -4.63184 | AAGTTATCTGAAAAA GGCGTG TTT CTCGCC AGTAATAACGAAATA TERM 1156 921386 - 921375 - g 100 -5.8 -5.71638 | opp_overlap 921375 GAAGAAGCAAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT ybhJ 921273 - 923453 + | putative enzyme TERM 1157 923512 - 923560 + T 75 -9.5 -3.53811 | opp_overlap 923557, overlap 923499 923502 923542 923545 GATGCGATGCTGGCG CATCTTATCCGACCTACAAATCG CAT CGAACCGTAGGCCGGATAAGGCG TTTACGCCGCATCCG ybhC 924877 - 923594 - | putative pectinesterase S0941 925782 - 925012 - | putative integrase encoded by prophage CP-933K; partial TERM 1158 925810 - 925826 + r 77 -3.7 -5.14965 | TGTCTTCTGCTTGAT TCCTC TGCTGGC GAGGA TTTTTTCGTAGCGAT S0942 926707 - 925994 - | IS600 orfB S0943 927150 - 926848 - | IS600 orfA TERM 1159 927715 - 927688 - g 77 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG S0944 927343 - 927771 + | putative lysozyme protein R of prophage CP-933K TERM 1160 928055 - 928067 + G 73 -9.1 -3.62046 | opp_overlap 928048 GCTAAGCAGGCATTA CAGCC TGG GGCTG TTGTTGCCCGGATCG S0945 927896 - 928393 + | ISSfl3 orfA S0946 928390 - 928740 + | ISSfl3 orfB TERM 1161 928968 - 928931 - g 70 -6.2 -4.1585 | overlap 928932 928936 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 1162 928990 - 928973 - g 82 -9.1 -4.19238 | overlap 928986 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA S0947 928737 - 929279 + | ISSfl3 orfC S0948 929285 - 929611 + | IS629 orfA TERM 1163 929931 - 929919 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC S0949 929611 - 930498 + | IS629 orfB S0950 930482 - 930670 + | hypothetical protein S0952 931204 - 931479 + | IS1 orfA S0953 931398 - 931901 + | IS1 orfB S0956 933145 - 933447 + | IS600 orfA S0957 933588 - 934301 + | IS600 orfB S0958 935047 - 934544 - | IS1 orfB S0959 935875 - 935162 - | IS600 orfB S0960 936318 - 936016 - | IS600 orfA TERM 1164 936691 - 936714 + r 88 -12.5 -3.53761 | opp_overlap 936691 GCGCGGAATAAAAAA GCGGCAACT CAATAA AGTTGCCGC TTTACGAGGAAATTA TERM 1165 936714 - 936691 - R 100 -13.2 -5.4505 | opp_overlap 936691 GCGCGGAATAAAAAA GCGGCAACTC AATA AAGTTGCCGC TTTACGAGGAAATTA pflA 937467 - 936727 - | pyruvate formate lyase-activating enzyme 1 TERM 1166 936791 - 936813 + g 72 -6.3 -4.34263 | overlap 936792 TCCATGGTCTCTTTC TTCGGTGGT TTAAC ACCATCGAG TTTGTATTCTTCACC TERM 1167 937162 - 937145 - G 71 -2.7 -4.75219 | gap 1 TAACGACGAACAAAA CCGT-TGG TAT CCAGACAG GTATGAATGCCTTCT TERM 1168 937290 - 937273 - G 72 -7.7 -3.87869 | opp_overlap 937273 GGAAGCGTTCATAAA GTGGCGA TAGG TCACCAC TTCCTTCATCAAATC TERM 1169 937584 - 937628 + r 82 -7.2 -4.80882 | gap 1, opp_overlap 937597, overlap 937585 937597 TGACAAAAAAGGCTC TCGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACGC TTTTTACTGTACGAT TERM 1170 937585 - 937627 + r 79 -10.7 -3.47806 | gap 1, opp_overlap 937597, overlap 937584 937597 GACAAAAAAGGCTCT CGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACG CTTTTTACTGTACGA TERM 1171 937616 - 937597 - R 100 -11.4 -5.00616 | opp_overlap 937597 937585 937584 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT TERM 1172 937597 - 937616 + r 83 -9.2 -4.33851 | opp_overlap 937597, overlap 937585 937584 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT pflB 939941 - 937659 - | formate acetyltransferase 1 focA 940853 - 939996 - | formate transporter TERM 1173 941207 - 941185 - R 74 -11.3 -2.86654 | opp_overlap 941185, overlap 941184 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC TERM 1174 941226 - 941256 + r 70 -2.5 -5.07652 | opp_overlap 941226 941233, overlap 941231 941233 TATAACTCAGACTAA TCATTAAGCCTAC ATTGC GTAGGCTATTTGA TTTTATTTTGCCCAG TERM 1175 941231 - 941251 + r 72 -5.4 -4.41486 | opp_overlap 941226 941233, overlap 941226 941233 CTCAGACTAATCATT AAGCCTAC ATTGC GTAGGCTA TTTGATTTTATTTTG ycaO 943019 - 941259 - | hypothetical protein TERM 1176 941605 - 941615 + g 75 -6.8 -4.41047 | overlap 941600 TCGCCACCAGCCAGC GCCA GCA TGGC TTTTAATTCACCGAT TERM 1177 943175 - 943192 + H 78 -6.3 -4.62054 | CGATCTCCACCGTAT GGCATTT GATA AAGTGCC TTTTGATTTCCTTGG TERM 1178 944591 - 944570 - g 71 -3 -4.82901 | gap 1, opp_overlap 944587, overlap 944572 TGGCGCGCAGAAAAA TATC-GGCC CGGCT GGCCTGACA ATCGTCATCGTTCGT serC 943974 - 945062 + | phosphoserine aminotransferase TERM 1179 945082 - 945102 + F 100 -12.6 -5.4659 | GAAATTTTGCTTAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG aroA 945133 - 946416 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1180 946527 - 946552 + F 100 -9.8 -5.61596 | opp_overlap 946527 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 1181 946552 - 946527 - f 72 -9.1 -3.61398 | opp_overlap 946527 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT yi41 946560 - 947888 + | IS4 orf TERM 1182 947899 - 947870 - f 89 -9.3 -4.59109 | overlap 947872 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACGGCACATTGTCG TERM 1183 947897 - 947872 - f 100 -16.3 -3.90762 | overlap 947870 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACGGCACATTGT ycaL 948024 - 948788 + | putative heat shock protein TERM 1184 948904 - 948924 + F 76 -8.9 -3.66784 | opp_overlap 948917, overlap 948917 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC TERM 1185 949280 - 949317 + G 81 -10.5 -3.57561 | opp_overlap 949246, overlap 949269 949258 AAGTCGCGGCATTCC CACGCGTTCGTGAAGCA TTAT TGCGTCGCCAACGCGCG TTTCGCGAATTACCA TERM 1186 949513 - 949501 - g 70 -6.9 -4.04806 | GCCGAGATCAAAGAA CGCGA CGA CCGCG ATCGTAACCGAGCGG TERM 1187 949621 - 949606 - g 70 -4 -4.68424 | gap 1, overlap 949615 949617 CAATTGATTGAAAAA GCGC-TA CAA TACGCGC GCCAGAAATTGGCTC cmk 948961 - 949644 + | cytidylate kinase TERM 1188 949929 - 949919 - g 88 -8.2 -4.63527 | overlap 949920 949921 TGAGCAGTTCAAAAA CGCC CAG GGCG AGCTGGAAATCCAGG rpsA 949755 - 951428 + | 30S ribosomal protein S1 TERM 1189 951439 - 951460 + F 87 -9.5 -4.29929 | overlap 951433 AGTAATTCTCTGACT CTTCGGGAT TTTT ATTCCGAAG TTTGTTGAGTTTACT TERM 1190 951537 - 951507 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 951514, overlap 951510 951514 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAGCAACAGCA TERM 1191 951535 - 951510 - f 93 -15.5 -2.84098 | opp_overlap 951514, overlap 951507 951514 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAGCAACAG TERM 1192 951514 - 951531 + F 86 -14.1 -3.18264 | opp_overlap 951510 951507 951514 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA TERM 1193 951531 - 951514 - f 90 -14.1 -3.30554 | opp_overlap 951514, overlap 951510 951507 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA ihfB 951588 - 951872 + | integration host factor subunit beta TERM 1194 951902 - 951916 + F 91 -7.8 -5.20154 | opp_overlap 951902, overlap 951894 TTGAACGCGAGAAAA GCACCT GTC GGGTGC TTTTTTCAATTCTCT TERM 1195 951916 - 951902 - f 77 -7.1 -4.42788 | opp_overlap 951902 951894 TTGAACGCGAGAAAA GCACC TGTCG GGTGC TTTTTTCAATTCTCT TERM 1196 953064 - 953090 + F 77 -3.6 -5.22312 | overlap 953067 953068 953085 CGCAAAGTTTATGGC TCTCTGCCGC TGCGGTC GCGGCACTGA TTTTTTGGTATCAGT TERM 1197 955217 - 955230 + G 77 -6.7 -4.44211 | GGATAACCTGACTGC CGGTA CGAT TACCG TTGTTTTCTCTTCAA msbA 954375 - 956123 + | lipid transporter ATP-binding/permease protein TERM 1198 956155 - 956174 + G 75 -11.4 -2.88677 | overlap 956157 TGGTGAATCCCCTTT GTGGCGGC TATT GCTGCCAC TCTCCTGGTTGTATG TERM 1199 956255 - 956231 - g 75 -5.5 -4.61873 | overlap 956236 TGCTATAAACTAAAA CTGAAGCGCGC CTG GCGTGCCCCCG TACCGGTTGTCGTGG TERM 1200 956526 - 956516 - g 70 -6.8 -4.09685 | TCTGATGCGGTAAAA GCCA TTC TGGC GCAACACCCTGATGT TERM 1201 956824 - 956848 + G 74 -2.9 -5.0133 | gap 2, overlap 956824 956825 ACATGTAGTGGCGAT G-GCGG-GGAT TGGGC ATCCGCCGCGC TTTTTTGCCACGCTG lpxK 956120 - 957106 + | tetraacyldisaccharide 4'-kinase TERM 1202 958041 - 958052 + G 74 -2.2 -5.10154 | gap 1, opp_overlap 958041 TCTGGGATCGCAAAC GC-GC AGA GCAGC TTTTTGATTTTAGCT TERM 1203 958101 - 958111 + G 70 -6.8 -4.00512 | opp_overlap 958100 958101 CCCCAGCGCCGAAAC GCCA GTA TGGC TATTTTGTTCTGCCA ycaQ 957143 - 958375 + | hypothetical protein ycaR 958427 - 958609 + | hypothetical protein kdsB 958606 - 959352 + | 3-deoxy-manno-octulosonate cytidylyltransferase S0979 959506 - 960399 + | hypothetical protein ycbC 961155 - 960376 - | hypothetical protein TERM 1204 961837 - 961822 - g 100 -2.4 -5.93252 | overlap 961824 CCGAAAAAGAAAAAA CGGACG CTTT CGCCAG ATTATCCACGCGACC smtA 961291 - 962076 + | putative metallothionein SmtA TERM 1205 963213 - 963184 - g 70 -5.7 -4.36914 | gap 1, opp_overlap 963211 TTGCCGTGTACAAAA CCAGA-CAAGTGCC GCT GGATCTTGGTCTGG TGGTACGCGAATATC TERM 1206 963243 - 963268 + G 81 -10.5 -3.58505 | gap 1, opp_overlap 963239, overlap 963211 963239 CTGTCACAGTATCCG CGTGC-ACGTCA CTT TGACGTTGCGCG TATTGTTATTGATCA mukF 962073 - 963395 + | condesin subunit F TERM 1207 963447 - 963462 + G 70 -10.4 -3.17075 | GAATCCGTTATTTCC GGCGCT GGAC AGCGCC TTACGTTCAGGCCGC mukE 963403 - 964080 + | condesin subunit E TERM 1208 965315 - 965269 - g 70 -6.5 -4.15565 | gap 1, opp_overlap 965261, overlap 965273 TGGACGAGCTGAAAA GCCAGCTTGCT-GACTACCAGC AGGC GCTGGACGTCCAGCAAACGCGC GCGATCCAGTATAAC TERM 1209 965467 - 965452 - g 81 -4.7 -5.10497 | AAGCGACTGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC TERM 1210 967474 - 967460 - g 72 -8.5 -3.82202 | opp_overlap 967471 CATGGTGAAAGATAA CGGCG TTGAG CGCCG CTTACACCGTCGTGA TERM 1211 967930 - 967894 - g 72 -11 -3.05844 | gap 1, overlap 967925 TTGGTCAGGTGAACA GCGTGCGTCTCAACG TGAACGTG CGT-GAAACGCACGC CATGCTGCTGGATGT mukB 964080 - 968540 + | cell division protein MukB TERM 1212 968568 - 968543 - f 73 -7.5 -4.1899 | opp_overlap 968547, overlap 968547 CCAGGCGAGTTAAAA TTAAGGCGGCA GCAA TGCCGCCTTTT CTTTTTCCGAAAACT TERM 1213 968547 - 968564 + F 100 -12.7 -5.26119 | opp_overlap 968547 968543 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1214 968564 - 968547 - f 93 -12.7 -3.69605 | opp_overlap 968547, overlap 968543 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1215 968695 - 968670 - f 72 -9.1 -3.61398 | opp_overlap 968670 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 1216 968670 - 968695 + F 100 -9.8 -5.61596 | opp_overlap 968670 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT S0985 968703 - 970031 + | IS4 orf TERM 1217 970042 - 970013 - f 89 -9.3 -4.59109 | overlap 970015 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACATAACGGCGC TERM 1218 970040 - 970015 - f 100 -16.3 -3.90762 | overlap 970013 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACATAACGGC ycbB 970239 - 972086 + | hypothetical protein ycbK 972267 - 972815 + | hypothetical protein TERM 1219 972948 - 972909 - g 76 -7.7 -4.15044 | gap 1, overlap 972910 TCTGGTGTGAACAAA CCCGCCTGGCCGCACTGG TCGAT CCTG-GCGGCGATGCGGA AAAAATCAAACAGGA ycbL 972842 - 973489 + | hypothetical protein TERM 1220 973674 - 973698 + T 70 -5 -4.42235 | gap 1, overlap 973669 973677 CGTTTGTCATCAGTC TCA-GCCCGCT TTTC AGCGGGCTTCA TTGTTTTTAACGCTT TERM 1221 973677 - 973694 + T 93 -12.7 -3.74868 | overlap 973674 973669 TTGTCATCAGTCTCA GCCCGCT TTTC AGCGGGC TTCATTGTTTTTAAC aspC 974902 - 973712 - | aromatic amino acid aminotransferase TERM 1222 975055 - 975040 - R 100 -9 -5.97575 | opp_overlap 975040 AAGGCATAAAAAAAA CAGGAC CAAC GTCCTG TTTTTTCGGCATTTA TERM 1223 975040 - 975055 + r 100 -9 -5.07107 | opp_overlap 975040 AAGGCATAAAAAAAA CAGGAC CAAC GTCCTG TTTTTTCGGCATTTA ompF 976175 - 975087 - | outer membrane protein F TERM 1224 975607 - 975627 + g 70 -4.7 -4.57569 | gap 1, opp_overlap 975592 975584 975607, overlap 975609 CCGTCGCCGTTAGAA CG-GCGTG CAGTGT CACGCTCG TTTTTACCCAGGTAC TERM 1225 976601 - 976625 + r 76 -2.1 -5.28176 | opp_overlap 976601 976605 CAGCTAAGAAAAAAC TAATCCGCAAT AAG AGTACGGGTTA TTTTTTGTGCGTAAA TERM 1226 976742 - 976761 + r 93 -13.6 -3.53091 | opp_overlap 976742 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT TERM 1227 976761 - 976742 - R 100 -13.6 -5.43621 | opp_overlap 976742 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT asnC 978176 - 976776 - | asparaginyl-tRNA synthetase TERM 1228 978336 - 978319 - R 100 -9.1 -5.22943 | opp_overlap 978316 ATTAAAGGTAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG pncB 979547 - 978345 - | nicotinate phosphoribosyltransferase TERM 1229 981857 - 981847 - g 72 -6.8 -4.19472 | GAAGATATTGCAAAA CGCA CTC TGCG TAATGCCTGCCTGCG TERM 1230 981952 - 981964 + G 78 -9.1 -3.86822 | overlap 981954 AACAATATGACCGAT GCGCT GGC AGCGC TTTCTGCGGCGGTTG TERM 1231 982358 - 982346 - g 70 -4.7 -4.47328 | overlap 982347 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAACAGTTGAAAGG pepN 979813 - 982428 + | aminopeptidase N TERM 1232 982479 - 982445 - T 76 -8.5 -4.18197 | opp_overlap 982453 982455, overlap 982446 ACTTTTGAGCCAAAA TGCCTGATGCGACGC TTGAC GCGTCTTATCAGGCC TACAACTCCGTTGAA TERM 1233 982478 - 982446 - T 78 -12 -3.10597 | opp_overlap 982453 982455, overlap 982445 CTTTTGAGCCAAAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAACTCCGTTGA ssuB 983402 - 982635 - | aliphatic sulfonates transport ATP-binding subunit S0996 984932 - 984027 - | insertion element IS2 transposase InsD S0997 985255 - 984890 - | insertion sequence 2 OrfA protein ycbN 986683 - 985538 - | alkanesulfonate monooxygenase ycbO 987639 - 986680 - | alkanesulfonate transporter substrate-binding subunit TERM 1234 986724 - 986736 + g 74 -3.3 -5.00616 | GCTGCCAGATGCGCT GGCGA ATA TCGAC TTTTTTCGGCACCAG ycbP 988207 - 987632 - | NAD(P)H-dependent FMN reductase S1002 988345 - 989040 + | IS1 orfB, A S1004 989914 - 989411 - | IS1 orfB S1005 990108 - 989833 - | IS1 orfA TERM 1235 991166 - 991156 - g 72 -5.4 -4.47217 | opp_overlap 991156 AACGATTAAGCAAAA TGGT TAC ACCA TTTACCAAACTTATG ycbS 990248 - 992848 + | putative outer membrane protein S1007 992839 - 993822 + | fimbrial protein S1008 993920 - 994462 + | putative fimbrial-like protein TERM 1236 994613 - 994642 + GF 88 -2.1 -5.52384 | gap 1, overlap 994614 TAGCAAGCAAATCAA TGTG-CAGTTAGGC GAT GTCTCGCTGACACG TTTTTTTCATGGGAA S1009 994422 - 994985 + | putative fimbrial-like protein ycbF 994951 - 995688 + | hypotheical protein TERM 1237 996412 - 996399 - g 72 -5.3 -4.47707 | CGCGATTAAAAATAA GCAAA ATGA TTTGC AAGCGATGCACCATA pyrD 995800 - 996810 + | dihydroorotate dehydrogenase 2 ycbW 996948 - 997526 + | hypothetical protein S1013 998632 - 997523 - | hypothetical protein TERM 1238 998113 - 998130 + g 75 -5.5 -4.62069 | opp_overlap 998104 998105 CGGAAACCACCAGAT TGGGGCG GAAT TGCTCCA TTTTTACACTGGCCG TERM 1239 1000358 - 1000342 - g 70 -3.7 -4.6902 | CCATAAGGGCAAAAA CCAGT ACCAGAA ACTGG GCGAGAAGGGCGAGT ycbY 998876 - 1000984 + | 23S rRNA m(2)G2445 methyltransferase TERM 1240 1002638 - 1002626 - g 82 -2.6 -5.40072 | overlap 1002634 CTGCGGTGAAAAAAA GCGA AGAAG CCGC CGCGCCAAAAGCAGA uup 1000996 - 1002903 + | ABC transporter ATPase component TERM 1241 1002977 - 1002949 - f 83 -8.9 -4.21936 | overlap 1002950 CTGACAACGGTAAAA TTGCCTGATGAAC TGG GTTTATCAGGCAT GAAAACCAACACTTT TERM 1242 1002976 - 1002950 - f 81 -12.4 -3.1268 | overlap 1002949 TGACAACGGTAAAAT TGCCTGATGAAC TGG GTTTATCAGGCA TGAAAACCAACACTT TERM 1243 1003431 - 1003447 + G 72 -4.3 -4.62069 | opp_overlap 1003431 GGTCCGTTTAAAAGA GCAACTG GCA CGGGTGC TTTTTCAACTCAAAA TERM 1244 1003533 - 1003565 + G 71 -3.3 -4.84146 | overlap 1003538 GATGGCTTACGGCAG CATTGGGGTAGGCAG CAG CTTTCTCCCCTGGTG TTTATTTTGTGTCCT pqiA 1003033 - 1004286 + | paraquat-inducible protein A TERM 1245 1005081 - 1005095 + G 70 -4.3 -4.58424 | GGCAGCCAGTGGCAC CGAAA ACAGC TTTCG TTTTGTATGATGATC pqiB 1004291 - 1005931 + | paraquat-inducible protein B ymbA 1005928 - 1006491 + | hypothetical protein TERM 1246 1006514 - 1006540 + F 100 -10.8 -6.02919 | opp_overlap 1006514 GATTTGTAAATATAA CCGTCTCCGGTA TGT TGCCTGAGGCGG TTTTTTTGTTTCTAA TERM 1247 1006680 - 1006706 + F 72 -3 -5.07652 | overlap 1006681 1006682 CGCGGTATTGCTTAA CTGTGATTGC ACATTTA GTAATCACTG TTTTCTTTTCCACCA rmf 1006747 - 1006914 + | ribosome modulation factor TERM 1248 1006929 - 1006959 + T 79 -8.2 -4.34345 | opp_overlap 1006932 1006936, overlap 1006931 1006936 ATTCTGTCTCTTTAA AAAGAAACCTCCGC ATT GCGGAGGTTTCGCC TTTTGATACTCTGTC TERM 1249 1006931 - 1006957 + T 90 -15.2 -2.51207 | opp_overlap 1006932 1006936, overlap 1006929 1006936 TCTGTCTCTTTAAAA AGAAACCTCCGC ATT GCGGAGGTTTCG CCTTTTGATACTCTG TERM 1250 1006956 - 1006932 - T 100 -18.7 -4.56597 | opp_overlap 1006931 1006929 1006936, overlap 1006936 CTGTCTCTTTAAAAA GAAACCTCCGC ATT GCGGAGGTTTC GCCTTTTGATACTCT TERM 1251 1006936 - 1006952 + T 100 -13.7 -3.77484 | opp_overlap 1006932 1006936, overlap 1006931 1006929 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA TERM 1252 1006952 - 1006936 - T 100 -13.7 -4.85782 | opp_overlap 1006936 1006931 1006929, overlap 1006932 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA fabA 1007502 - 1006984 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase S1021 1009331 - 1007571 - | putative ATP-dependent protease ycbG 1009516 - 1009968 + | hypothetical protein TERM 1253 1010033 - 1009997 - T 95 -13.2 -3.794 | gap 1, opp_overlap 1010008, overlap 1010008 GTTCAATTTACTAAA GGCAAAAAAAACCCCGC AGCA GCGGGGTTTTTCT-ACC AGACGATAACTTAAG TERM 1254 1010023 - 1010008 - T 100 -11.8 -5.89947 | opp_overlap 1010008, overlap 1009997 TAAAGGCAAAAAAAA CCCCGC AGCA GCGGGG TTTTTCTACCAGACG TERM 1255 1010008 - 1010023 + T 100 -11.8 -4.82901 | opp_overlap 1010008 1009997 TAAAGGCAAAAAAAA CCCCGC AGCA GCGGGG TTTTTCTACCAGACG ompA 1011090 - 1010044 - | outer membrane protein A TERM 1256 1011357 - 1011345 - R 100 -4.7 -6.02914 | overlap 1011346 TTTACAGAAAAAAAA CGCGG AAA CCGCT TCAGACAAGCCTTCG TERM 1257 1011356 - 1011346 - R 79 -8.2 -4.20122 | overlap 1011345 TTACAGAAAAAAAAC GCGG AAA CCGC TTCAGACAAGCCTTC sulA 1011955 - 1011446 - | SOS cell division inhibitor S1025 1012174 - 1012599 + | hypothetical protein S1026 1012675 - 1013040 + | insertion sequence 2 OrfA protein S1027 1013019 - 1013651 + | IS2 orfB S1028 1015776 - 1013611 - | hypothetical protein TERM 1258 1014369 - 1014343 - G 77 -2.9 -5.16572 | gap 1, overlap 1014345 1014348 1014360 1014361 1014363 ACGGAAGGCAAAAAA GAGCACGCCGGT AATA ACCAGCA-GCAC CAGCTGCCCTTCCAG TERM 1259 1014511 - 1014500 - G 72 -4.4 -4.62441 | TGGCAGACAAACAAA CTTG TCAG CAAG ATCCAATACCCGTGA TERM 1260 1014921 - 1014896 - G 74 -8.3 -3.95554 | gap 1, overlap 1014898 TGACGCAACAAAATA CA-GCGTGACAG TTG CTGGCACGCCTG GCCCTGCATCGACAT TERM 1261 1014918 - 1014898 - G 78 -11.1 -3.55864 | overlap 1014896 ACGCAACAAAATACA GCGTGACAG TTG CTGGCACGC CTGGCCCTGCATCGA yccF 1016232 - 1015786 - | hypothetical protein TERM 1262 1015818 - 1015830 + g 71 -9.1 -3.52906 | overlap 1015815 GTGCATTGGCTTCAC GCGCA GCT TGCGC TGTTTCTACCGATAC TERM 1263 1016153 - 1016139 - G 75 -5 -4.74103 | GCGGTAAGGTAAAAA TCAGCA CAA TACTGA CCAGAGTCGCCAACA helD 1016355 - 1018409 + | DNA helicase IV TERM 1264 1018433 - 1018414 - T 100 -13.6 -4.24711 | opp_overlap 1018410 1018407 GAAAACCGTAAGAAA CAGGTGGC GTTT GCCACCTG TGCAATATTACTTCA mgsA 1018899 - 1018441 - | methylglyoxal synthase TERM 1265 1018985 - 1018972 - R 88 -8.1 -4.7889 | overlap 1018974 ATAAAGACCGAAAAA GCCTG CGCA CAGGC ACAAAAATCTCAGGA S1032 1019657 - 1018995 - | hypothetical protein TERM 1266 1020008 - 1019990 - g 77 -8.8 -4.08064 | AAGTTGCCGGCAAAA CGCTGCTG GGC CAGCAGGG GTATGGCACGCTGGC S1033 1019776 - 1020243 + | hypothetical protein TERM 1267 1020248 - 1020275 + T 100 -17.1 -4.1673 | opp_overlap 1020248 TGGCCAAATAAAAAA TCCCCGGAAGG CAAAAA CCTTCCGGGGA TTTGTTCAGGGATTA TERM 1268 1020275 - 1020248 - T 100 -17.8 -5.63517 | opp_overlap 1020248 TGGCCAAATAAAAAA TCCCCGGAAGGC AAAA ACCTTCCGGGGA TTTGTTCAGGGATTA yccV 1020656 - 1020288 - | hypothetical protein S1035 1021766 - 1020663 - | putative oxidoreductase TERM 1269 1020778 - 1020799 + g 72 -5.9 -4.40358 | gap 1, opp_overlap 1020782, overlap 1020782 ACATCACGACCGGCA TCAATTGCGG CAT CCGCGAT-GA TTTTCTGAAATAAAT S1036 1021948 - 1022226 + | hypothetical protein yccK 1022552 - 1022223 - | sulfurtransferase TusE TERM 1270 1022287 - 1022318 + g 91 -8 -5.06414 | TTAGCCGGGCCTTTC GGGAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCACCAAA TERM 1271 1022623 - 1022597 - R 100 -10.1 -5.46657 | CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTATG AAAGTGTTAGCGGGT yccA 1023302 - 1022643 - | hypothetical protein TERM 1272 1023084 - 1023097 + g 70 -5.2 -4.42386 | GGAGATAATCCCGGT CGGC TTATTC GCCG TTTTATAGGTCAGGA TERM 1273 1023476 - 1023498 + H 77 -9.1 -3.90464 | opp_overlap 1023476, overlap 1023471 CAGGCAAAAGAAAAA GGGGGTAGC GTTTA GCTAACCCC TTATCTTATTTGGCG TERM 1274 1023498 - 1023476 - H 100 -9.1 -5.48213 | opp_overlap 1023471 1023476 CAGGCAAAAGAAAAA GGGGGTAGC GTTTA GCTAACCCC TTATCTTATTTGGCG hyaA 1024022 - 1025140 + | hydrogenase-1 small subunit TERM 1275 1025325 - 1025346 + G 72 -10.1 -3.35371 | gap 1, overlap 1025345 CATCCTGCAAGGGCG CGACCCGCGC GAT GCGTGGG-CG TTCGTTGAACGTATC TERM 1276 1026348 - 1026334 - g 88 -11.4 -3.72893 | TACTCGTGGATCAAA GCGCCA CGC TGGCGC GGTAACGCGATGGAA hyaB 1025137 - 1026930 + | hydrogenase 1 large subunit hyaC 1026949 - 1027656 + | hydrogenase 1 b-type cytochrome subunit hyaD 1027653 - 1028240 + | hydrogenase 1 maturation protease hyaE 1028237 - 1028635 + | hydrogenase-1 operon protein HyaE TERM 1277 1029210 - 1029232 + G 83 -6.2 -4.9792 | opp_overlap 1029211, overlap 1029211 TAATCTGACGCAATT ACCCATCAGC GAG GCTGATCGGC TTTTTCTCTCGCGTC TERM 1278 1029211 - 1029231 + G 77 -9.7 -3.58029 | opp_overlap 1029211, overlap 1029210 AATCTGACGCAATTA CCCATCAGC GAG GCTGATCGG CTTTTTCTCTCGCGT hyaF 1028632 - 1029489 + | hydrogenase-1 operon protein hyaF TERM 1279 1030060 - 1030095 + G 70 -5.4 -4.34402 | gap 1, opp_overlap 1030060 ATTGTGGATATTGAA TGC-CAACGGTTGGATG CAA TACCCGACCGGTGCGCA TTTTGATATCGACAC TERM 1280 1030126 - 1030147 + G 78 -10.9 -3.54424 | opp_overlap 1030128 CCTGCGTATGGAGAT GACCAGCTT CAGC GAGCTGGTC TTTAACCCGGTCAGC TERM 1281 1030539 - 1030529 - g 77 -8.2 -4.0942 | CACTCATTAGATAAA CCCG TGC CGGG TCTGAAGAATTTGAT appC 1029623 - 1031167 + | third cytochrome oxidase, subunit I appB 1031179 - 1032315 + | third cytochrome oxidase, subunit II TERM 1282 1032461 - 1032428 - f 81 -13.1 -2.60988 | overlap 1032425 1032424 AAGTTAACGAACGTA GGCCTGATGCGGCGC ATTA GCATCGCATCAGGCA ATCAATAATGTTAGA appA 1032499 - 1033797 + | phosphoanhydride phosphorylase TERM 1283 1033832 - 1033809 - T 100 -14 -5.31456 | opp_overlap 1033814 GTAATGCATAAAAAA GAGCATTCAG TTAC CTGAATGCTC TGAGGCTGATGACAA TERM 1284 1033891 - 1033880 - T 71 -7.2 -4.16943 | opp_overlap 1033867 GCGTAGACCGGAAAA GGCG TTCA CGCC GCATCCGGTCACTTT TERM 1285 1035037 - 1035051 + T 74 -5.6 -4.56597 | overlap 1035039 GCGTTTGCGTTCTTG CTCCAG CGT CTGGCG TTTTTCCAGCAGCGC etp 1036544 - 1036098 - | phosphotyrosine-protein phosphatase TERM 1286 1036185 - 1036199 + g 70 -6.4 -4.1891 | opp_overlap 1036185, overlap 1036181 CTGACTTTTACGATA GGGATC CGG GATCTC TTTCTGTTCCAGCCA TERM 1287 1036490 - 1036471 - G 72 -11.4 -2.50816 | overlap 1036470 CGTTTACGCAGCAAG CGCTCGCC AATG GGCGAACG GCAAATGTTGCCGGT yccZ 1037671 - 1036532 - | exopolysaccharide export protein ymcA 1039813 - 1037717 - | hypothetical protein ymcB 1040559 - 1039813 - | hypothetical protein ymcC 1041200 - 1040556 - | putative regulator ymcD 1041630 - 1041307 - | hypothetical protein cspH 1042266 - 1042054 - | cold shock-like protein S1058 1042621 - 1042896 + | IS1 orfA S1059 1042815 - 1043318 + | IS1 orfB cspG 1043340 - 1043540 + | cold shock protein CspG TERM 1288 1043745 - 1043761 + G 100 -9.4 -5.4251 | opp_overlap 1043742 1043745 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCTGCC ymcE 1043714 - 1043944 + | cold shock gene yccM 1045229 - 1044156 - | hypothetical protein TERM 1289 1045192 - 1045213 + g 100 -2.9 -5.71712 | gap 1, overlap 1045196 1045197 CCGCCCGTCGTGCCT GGCCGCCGCT GCC AGCGG-GTTC TTTTTTTCTCTGCCA TERM 1290 1045196 - 1045210 + g 80 -5.6 -4.92669 | overlap 1045192 1045197 CCGTCGTGCCTGGCC GCCGCT GCC AGCGGG TTCTTTTTTTCTCTG TERM 1291 1045197 - 1045209 + g 71 -9.1 -3.53161 | overlap 1045196 1045192 CGTCGTGCCTGGCCG CCGCT GCC AGCGG GTTCTTTTTTTCTCT TERM 1292 1045731 - 1045743 + H 76 -9.1 -3.76402 | AATAGTGAACTGGTA CGCTG GCG CAGCG TTTCGTCAATGACAT TERM 1293 1049013 - 1049040 + G 72 -5.6 -4.48987 | gap 1 CAATTACAGGGGCAA TCGGT-GTCTGAT AAT GTCAGCCCACCGA TTTTAGTTCTGACGC torT 1048125 - 1049153 + | periplasmic sensory protein associated with the TorRS two-component regulatory system torR 1049818 - 1049126 - | DNA-binding transcriptional regulator TorR torC 1049905 - 1051077 + | trimethylamine N-oxide reductase, cytochrome c-type subunit TERM 1294 1051439 - 1051450 + T 72 -5.8 -4.38712 | CGACACCTCCCAGCG CGGT GATA ACCG TTTTGTGCGCGTGAG TERM 1295 1051852 - 1051842 - T 74 -6.8 -4.21908 | overlap 1051849 TACGAGCAGCTAAAA GCGA AAG TCGC CGCCGGTGAAGTTGA TERM 1296 1053773 - 1053755 - T 86 -13.1 -3.36823 | opp_overlap 1053751, overlap 1053750 TTGCTGAAAAGCGAA CCGCCGC TCACT GCGGCGG TGAATGATCTGGAAA S1069 1054323 - 1053820 - | IS1 orfB S1070 1054517 - 1054242 - | IS1 orfA TERM 1297 1054881 - 1054860 - R 70 -2.2 -5.00616 | GTTTGCGGCAAAAAA CACTGACG GCGCTG CGGCAATG GTTACCAGAGTTTGC TERM 1298 1055026 - 1055012 - R 71 -7.1 -4.08216 | opp_overlap 1055001 1055000 1055003 1055002 TTATGCGCCTGAAAA GACGC GTTTA GCGTC GCATCAGGCATTATG TERM 1299 1055104 - 1055134 + r 83 -14 -2.73364 | opp_overlap 1055102 1055101, overlap 1055110 ATGAGCTACAAACCG GGAAAGCCGCTGGC GTA GCAGGCGGTTTTCC TGCTTCAGGTGCGCA yccD 1055388 - 1055083 - | chaperone-modulator protein CbpM TERM 1300 1055110 - 1055128 + g 78 -8 -4.3534 | opp_overlap 1055102 1055101, overlap 1055104 TACAAACCGGGAAAG CCGCTGGC GTA GCAGGCGG TTTTCCTGCTTCAGG cbpA 1056308 - 1055388 - | curved DNA-binding protein CbpA TERM 1301 1055508 - 1055522 + g 86 -6.4 -5.14563 | overlap 1055517 TTTCAGTACCGCATA CAGATC GCC GGTCTG TTTTTTGCTCACCAG TERM 1302 1056028 - 1056008 - G 72 -6.9 -4.18494 | CATGCTGACCGAAAA TTGACGAGA AGA TATCGTCAA AATCTTCGGCATTAA TERM 1303 1057500 - 1057490 - g 91 -5.4 -5.37345 | opp_overlap 1057490 TTGAATGACAAAAAA TGCA TAC TGCA TTTACCCGAGTTTAT yccE 1056569 - 1057825 + | hypothetical protein TERM 1304 1057969 - 1057997 + F 93 -10.3 -4.61633 | opp_overlap 1057971 GAGGCAGGGGCTAAT CAGGCATAGTTTG CGT CAAACCTTGCCTG TTTTTGAAGATGTAT TERM 1305 1058558 - 1058542 - g 87 -4.3 -5.19212 | ATCACCAGGAAAAAA TGGGCAC TAT GGACCCA ACCTTTAACCCGATG agp 1058118 - 1059359 + | glucose-1-phosphatase/inositol phosphatase TERM 1306 1059389 - 1059367 - T 100 -16.3 -4.84673 | opp_overlap 1059363 TGAAATAACAGAAAA CTCCCCCGC GAGAA GCGGGGGAG TCGCTGGTTAAACGT yccJ 1059624 - 1059397 - | hypothetical protein wrbA 1060241 - 1059645 - | TrpR binding protein WrbA TERM 1307 1060561 - 1060546 - g 76 -7.6 -4.19817 | opp_overlap 1060553 CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTAATTCT ycdF 1060451 - 1060681 + | hypothetical protein TERM 1308 1060777 - 1060794 + T 100 -14.1 -4.84918 | opp_overlap 1060774 GTCAAAAAGTCATCA CCGCCGG TAAC CCGGCGG TTTTCTGTTTATGGC ycdG 1062197 - 1060803 - | putative transport protein S1080 1062610 - 1062152 - | hypothetical protein S1081 1063247 - 1062657 - | hypothetical protein TERM 1309 1062816 - 1062805 - G 70 -7.2 -4.11216 | overlap 1062806 TGTTGACGGTCAAAA CCCG ACAT CGGG CCGGTATCCAGTCCC S1082 1064057 - 1063257 - | putative acetyltransferase S1083 1064451 - 1064065 - | hypothetical protein S1084 1065197 - 1064463 - | putative synthetase TERM 1310 1064669 - 1064634 - GR 87 -4.6 -5.24531 | gap 1, opp_overlap 1064641, overlap 1064635 ATGCTCCAGAAAAAA GCCATCGCGTAGCGTCG ATT CGACGC-AGACGTTGGT AGCGATACCGGTGAA TERM 1311 1064668 - 1064635 - GR 72 -8.1 -3.73995 | gap 1, opp_overlap 1064641, overlap 1064634 TGCTCCAGAAAAAAG CCATCGCGTAGCGTCG ATT CGACGC-AGACGTTGG TAGCGATACCGGTGA S1085 1066303 - 1065155 - | hypothetical protein TERM 1312 1066610 - 1066597 - g 82 -2.3 -5.45652 | overlap 1066583 AGCGCGAAGAAAAAA GCGAT TCTT AGCGC AGCACTGGACACTTT TERM 1313 1067002 - 1066957 - g 74 -8.3 -3.99405 | gap 1, opp_overlap 1066957 TTAATTGATGAGAAA TCGGCGC-TGATTGCCGGTT GGGTCAA AAGCGGCAAACTCGCGCCGA TTGATCCGCAGCATT ycdC 1066534 - 1067172 + | putative tet operon regulator TERM 1314 1067202 - 1067179 - T 74 -11 -2.85297 | opp_overlap 1067174 1067174 1067200, overlap 1067176 1067174 CCACGTTAAAGATGA CGGAGGAGGT TGTA ACATCCTCCG GCTACCTGTTTAACC TERM 1315 1067246 - 1067231 - T 83 -10.4 -3.73775 | opp_overlap 1067240 CCGATCGTCATTAAA CTGGCG TTAC CGCCAG CGGCAGCGGTATTCA S1087 1068653 - 1067466 - | IS91 TERM 1316 1068241 - 1068256 + g 73 -9 -3.63805 | ATCCCCGGCTCCACA TCTGCC TGAT GGCAGA TTTCCAGTATCACAT TERM 1317 1068566 - 1068587 + g 70 -7.2 -4.06419 | opp_overlap 1068563 CTGATTCAATTACCA CCGGACGG ACTGCC CCTTCCGG TTGTTTCTCCAGCCA S1088 1069017 - 1068670 - | IS91 S1089 1069073 - 1069780 + | putative cytochrome TERM 1318 1070790 - 1070771 - g 72 -5 -4.6902 | opp_overlap 1070785 CCACAACTGCAAAAA GCCAAC CCGGAACT GTTGGC AAAAGTCGATGCCAA ycdO 1069838 - 1070965 + | hypothetical protein TERM 1319 1071014 - 1070991 - g 90 -9.6 -4.53036 | opp_overlap 1070989 1071005, overlap 1071005 GTATAAAGATGAAAA CGGCGTGA ATGAACCG TCACGCCG ACGTTTACTGAAAGG TERM 1320 1071087 - 1071077 - g 82 -3.2 -5.28176 | overlap 1071083 CTCATGCACAAAAAA CGCA AAG TGCA CCGGGCACGCTTTCA ycdB 1070971 - 1072236 + | hypothetical protein TERM 1321 1072792 - 1072809 + T 72 -10.5 -2.80816 | opp_overlap 1072791 1072792 GTTCGTGCGCATAAT CGCGCTG CCAA CGGCGCG TGTGATGAATACAAA TERM 1322 1073646 - 1073670 + T 100 -13.6 -4.33907 | overlap 1073650 AGTGTATTATCGGTG CAGAGCCCGG GCGAA CCGGGCTTTG TTTTGGGTGTTTATG TERM 1323 1073650 - 1073666 + T 93 -10.8 -4.71418 | overlap 1073646 TATTATCGGTGCAGA GCCCGG GCGAA CCGGGC TTTGTTTTGGGTGTT S1093 1074607 - 1073741 - | IS3 orfB TERM 1324 1074330 - 1074357 + g 75 -4.7 -4.74103 | overlap 1074305 1074305 GCCTTTGCCCTCAGT CCCTGACGGCG CAGGCT TGCCGCCACGG TTTTTACGTTAAAGG S1094 1074903 - 1074604 - | IS3 orfA ycdU 1075495 - 1076481 + | hypothetical protein TERM 1325 1076660 - 1076641 - f 100 -7.8 -5.92337 | opp_overlap 1076639 1076641 ATATACGAAAAAAAA GCCCGTAC TTTC GTACGCGC TCTTCTTTAAATATG TERM 1326 1076975 - 1076957 - f 72 -8.9 -3.58184 | AGATCATAACGATAA GTGCGAA TAAAT TTCGCAC AACGCTTTTCGGGAG TERM 1327 1078281 - 1078298 + G 72 -5.5 -4.57073 | TGGATCTGATTATTG CCGGTTT TCAT GAGCCGG TTTTTGCGCCACATG ycdX 1077989 - 1078726 + | putative hydrolase ycdY 1078750 - 1079304 + | putative oxidoreductase component TERM 1328 1079843 - 1079825 - g 71 -2.2 -4.88407 | overlap 1079827 TTACGCAATGAAAAA CAGCGGCC TGT GGCTGGCG GCGCGTAGTGCAAAG ycdZ 1079376 - 1079897 + | hypothetical protein TERM 1329 1079914 - 1079888 - T 100 -9.5 -5.01811 | opp_overlap 1079892, overlap 1079892 GCAGGAAATCAAAAA TAAAGCGTGAG GGGCA CTCACGCTTTC GCTTAAACAGTAAAT TERM 1330 1079910 - 1079892 - T 100 -10.3 -5.00388 | opp_overlap 1079892, overlap 1079888 GAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1331 1079892 - 1079910 + T 83 -10.3 -3.75332 | opp_overlap 1079892 1079888 GAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1332 1079950 - 1079929 - T 74 -8.7 -4.00532 | opp_overlap 1079929 CGCTTAAACAGTAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTGTCAGG TERM 1333 1079929 - 1079950 + T 91 -8.7 -5.03994 | opp_overlap 1079929 CGCTTAAACAGTAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTGTCAGG TERM 1334 1080431 - 1080444 + T 73 -4.5 -4.77165 | opp_overlap 1080431, overlap 1080432 GGATTCGGTTATTAA TGGCA ACCG TGCCG TTTTCTTGTGCCGCA TERM 1335 1080629 - 1080586 - T 93 -11.8 -3.70902 | opp_overlap 1080590, overlap 1080590 TGTTGTATACCGAAA CAAAGATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATCTTTG TAGCTCTGAGCACGA TERM 1336 1080625 - 1080590 - T 77 -6.8 -4.48299 | opp_overlap 1080590, overlap 1080586 GTATACCGAAACAAA GATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATC TTTGTAGCTCTGAGC csgF 1081179 - 1080763 - | curli assembly protein CsgF csgE 1081593 - 1081204 - | curli assembly protein CsgE csgD 1082248 - 1081598 - | DNA-binding transcriptional regulator CsgD TERM 1337 1081991 - 1082012 + g 93 -8.9 -4.77036 | opp_overlap 1081994 TTCAGGCGTATTTAG CAACAATAT TTTG ATATTGTTG TTTTTCCTGCTCAAA TERM 1338 1082633 - 1082654 + H 82 -3 -5.52384 | AAACGTTTTTGTTTT TTCTCCAC ACCTCC GTGGACAA TTTTTTTACTGCAAA csgB 1083002 - 1083457 + | curlin minor subunit S1110 1083671 - 1083973 + | IS600 S1111 1084114 - 1084752 + | IS600 ORF2 TERM 1339 1085136 - 1085121 - f 87 -10.4 -4.08706 | opp_overlap 1085121 TTTGTATTACAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA TERM 1340 1085121 - 1085136 + F 100 -10.4 -5.75342 | opp_overlap 1085121 TTTGTATTACAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA csgC 1085157 - 1085489 + | putative autoagglutination protein S1114 1085610 - 1085921 + | hypothetical protein S1115 1086016 - 1086549 + | hypothetical protein TERM 1341 1087192 - 1087215 + GT 75 -9.7 -3.53811 | opp_overlap 1087195, overlap 1087180 1087195 ACCCGCCTCCTGGCA TAACGATGC CATGAC GCATCGTTA TTTACGCAAAATGGA TERM 1342 1087928 - 1087898 - gT 100 -11.8 -5.03314 | opp_overlap 1087901, overlap 1087882 1087901 GTTATTCTCAAAAAA GAACCCGCCACCAG TTT CTGGAAGCGGGTTA TGGTCAGACTGGCGT TERM 1343 1087901 - 1087925 + GT 80 -11.3 -3.41051 | opp_overlap 1087882 1087898 1087901 ATTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG TERM 1344 1087925 - 1087901 - gT 100 -13.5 -4.62085 | opp_overlap 1087901, overlap 1087882 1087898 ATTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG ymdC 1086491 - 1087972 + | putative synthase mdoC 1089137 - 1087980 - | glucans biosynthesis protein TERM 1345 1088617 - 1088594 - G 100 -3.2 -5.64274 | gap 1, overlap 1088597 1088598 CGAGGCATAAAAAAA TCACCGATAGT TTT ACCATCGA-GA ATTTTTTATTCGTTT TERM 1346 1089975 - 1089965 - g 88 -5.4 -5.22289 | CAGCAAAGATAAAAA CGAT GAA ATCG TCAGCATGCTCGGGG mdoG 1089531 - 1091066 + | glucan biosynthesis protein G mdoH 1091059 - 1093602 + | glucosyltransferase MdoH TERM 1347 1093751 - 1093733 - T 79 -4.5 -5.11063 | opp_overlap 1093737, overlap 1093722 1093735 ACGAGCCAATAAAAA TACCGGC GTTAT GCCTGTA ATGCCAGTCAGTTAA TERM 1348 1093752 - 1093781 + T 89 -9.3 -4.59109 | opp_overlap 1093735, overlap 1093754 GGCGTTATGCCTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1349 1093754 - 1093779 + T 100 -16.3 -3.90762 | opp_overlap 1093735, overlap 1093752 CGTTATGCCTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S1120 1095207 - 1094152 - | IS91 orf TERM 1350 1094795 - 1094810 + g 73 -9 -3.63805 | ATCCCCGGCTCCACA TCTGCC TGAT GGCAGA TTTCCAGTATCACAT TERM 1351 1095120 - 1095141 + g 70 -7.2 -4.06419 | opp_overlap 1095117 CTGATTCAATTACCA CCGGACGG ACTGCC CCTTCCGG TTGTTTCTCCAGCCA S4816 1095629 - 1095207 - | hypothetical protein TERM 1352 1095451 - 1095465 + gH 74 -10 -3.44284 | opp_overlap 1095451 1095450, overlap 1095450 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA TERM 1353 1095465 - 1095451 - GH 70 -10 -2.95111 | opp_overlap 1095450 1095451, overlap 1095450 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA TERM 1354 1095925 - 1095936 + GH 72 -4.4 -4.61231 | CTCTAGGCATTCAAG GTTC TGAA GAAC TTTTTAGAAATATGA S4815 1095591 - 1096931 + | hypothetical protein TERM 1355 1097108 - 1097118 + G 72 -5.4 -4.50159 | GCAACTGTTAGACCG GATG CAC CATC TTTCTTTAGCTTCAA S4817 1096928 - 1097200 + | hypothetical protein S1123 1097924 - 1097304 - | IS629 orfB TERM 1356 1097871 - 1097883 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA S1124 1098513 - 1098187 - | IS629 orfA S1126 1098945 - 1099247 + | IS911 orfA TERM 1357 1099705 - 1099694 - g 77 -5.8 -4.63218 | opp_overlap 1099699 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG S1127 1099436 - 1100113 + | IS911 orfB S1128 1100553 - 1100131 - | hypothetical protein S1129 1100686 - 1101051 + | insertion sequence 2 OrfA protein S1130 1101009 - 1101914 + | insertion element IS2 transposase InsD S1131 1102310 - 1102636 + | IS629 orfA TERM 1358 1102952 - 1102940 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC S1132 1102872 - 1103519 + | IS629 orfB S1133 1103807 - 1104109 + | IS600 orfA S1134 1104250 - 1104729 + | IS600 orfB S1135 1104738 - 1104962 + | IS600 orfB S1136 1105919 - 1104987 - | hypothetical protein htrB 1107232 - 1106312 - | lipid A biosynthesis lauroyl acyltransferase TERM 1359 1106700 - 1106710 + g 70 -5.4 -4.41348 | TTTAAATCTTTGCGG TCGA GCA TCGA TTTATTTGAGCGCAA TERM 1360 1107051 - 1107073 + g 72 -8.4 -3.73224 | CACAGTTCCAGGTTG CGATGCACAA TTT TTGCGCGTCG TTTCATAAAACGTAA TERM 1361 1107512 - 1107499 - g 70 -6.7 -4.10429 | overlap 1107507 AACGACGCGTTAAAA GCCAA AATG TTGGC TGAGAGCGAACCGCG TERM 1362 1108160 - 1108184 + G 70 -4.1 -4.63218 | opp_overlap 1108149 1108147 AATACGCCCGTAAGG CGCGCGAGCAG GGC TTGCCGGTGCG TTTTATTGGCAAAAA yceA 1107457 - 1108509 + | hypothetical protein TERM 1363 1108545 - 1108511 - T 72 -5.7 -4.46675 | opp_overlap 1108514 1108515, overlap 1108513 1108516 ATCCAACAGAATAAA TATCATTGCCGGATG CGTGC CATCCGGCAACATTT CACTCTTACTTCTGC TERM 1364 1108543 - 1108513 - T 72 -8.3 -3.83144 | opp_overlap 1108514 1108515, overlap 1108511 1108516 CCAACAGAATAAATA TCATTGCCGGATG CGTGC CATCCGGCAACAT TTCACTCTTACTTCT TERM 1365 1108515 - 1108541 + T 74 -10.9 -2.86618 | opp_overlap 1108513 1108511 1108516, overlap 1108514 AACAGAATAAATATC ATTGCCGGATG CGTGC CATCCGGCAAC ATTTCACTCTTACTT TERM 1366 1108540 - 1108516 - T 88 -14.4 -2.9735 | opp_overlap 1108515 1108514, overlap 1108513 1108511 ACAGAATAAATATCA TTGCCGGATG CGTGC CATCCGGCAA CATTTCACTCTTACT yceI 1109126 - 1108551 - | hypothetical protein TERM 1367 1108855 - 1108843 - G 70 -5.5 -4.42386 | GTGGTATTGAGAAAA TCCGC ACT GCGAA GATGTTTATCGCGTT S1141 1109696 - 1109130 - | putative cytochrome TERM 1368 1109298 - 1109263 - G 77 -6 -4.66609 | gap 1, overlap 1109264 CACGCGAGCCAAAAA TGCAGG-GCACCGGCAA AGT CTGCCTGTGCGCCAGCG TCGGCAAGGGTCGCG yceO 1110070 - 1109957 - | hypothetical protein TERM 1369 1110029 - 1110019 - G 75 -5.4 -4.62163 | AGAGAAAAAGATAAA GCAT CAG ATGC TCGCGAATATTATTG TERM 1370 1110108 - 1110089 - R 93 -10.7 -4.57837 | opp_overlap 1110094 ATACTCCTGTAAAAA CGGCCTC ATTCTG GAGGCCG TAATGATGATTATTG solA 1111236 - 1110118 - | N-methyltryptophan oxidase TERM 1371 1111221 - 1111235 + g 100 -3.6 -5.76633 | CGCTGCCAATAATGA TGAGAT CGT ATTTCA TTTTTTTCTCTCTGC TERM 1372 1111326 - 1111310 - R 76 -9.4 -3.74347 | opp_overlap 1111310, overlap 1111304 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT TERM 1373 1111310 - 1111326 + r 83 -9.4 -4.20084 | opp_overlap 1111304 1111310 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT bssS 1111605 - 1111351 - | biofilm formation regulatory protein BssS TERM 1374 1111580 - 1111591 + g 71 -3 -4.8236 | ACGAGCGGATGAGTC TGAA TGAC TTCA TTATTTTTTTCCATC TERM 1375 1111873 - 1111858 - R 100 -7.5 -5.85244 | AAGTAAAATAAAAAA GCCGG GGCGAT CCGGC AAAAACAAAAATCAC dinI 1112140 - 1111895 - | DNA damage-inducible protein I pyrC 1113260 - 1112214 - | dihydroorotase TERM 1376 1113359 - 1113344 - R 100 -11.8 -4.91852 | opp_overlap 1113341 TGCACGAAAAATAAA GGGCGC GAAT GCGCCC TCGTCATTAATCCGT yceB 1113926 - 1113366 - | hypothetical protein TERM 1377 1114057 - 1114011 - R 83 -4.3 -5.31275 | gap 1, overlap 1114018 1114020 CGCCAGCAGAAAAAA CTGA-AAACGGCGGCAACCCGC GAAT ACAGGCTGCCGCGGCGGGTCAG GATTAAATCGCCATT TERM 1378 1114049 - 1114018 - R 100 -12.2 -4.55016 | overlap 1114011 1114020 AGAAAAAACTGAAAA CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG CGGGTCAGGATTAAA TERM 1379 1114047 - 1114020 - R 80 -13.4 -2.56715 | overlap 1114018 1114011 AAAAAACTGAAAACG GCGGCAACCCGC GAAT ACAGGCTGCCGC GGCGGGTCAGGATTA grxB 1114707 - 1114060 - | glutaredoxin 2 yceL 1115979 - 1114771 - | multidrug resistance protein MdtH TERM 1380 1114796 - 1114806 + g 74 -8.2 -3.92373 | opp_overlap 1114793 1114796, overlap 1114775 CGTTCCAGCAAACGA CGCG CGG CGCG TTTCTGACTAAACTG TERM 1381 1115482 - 1115466 - G 79 -3.5 -5.03227 | overlap 1115468 ATAGCACAAACAAAA CGGCCCC TGT GGCGCAG ACCAGGCGAAAGTCG TERM 1382 1115595 - 1115576 - G 87 -4.9 -5.30686 | opp_overlap 1115576 AACAGCGAGAAAAAA CGACCAC GTTGTT GTGGACG GATTAGTTTCACCAC TERM 1383 1116062 - 1116092 + H 71 -3.4 -4.8667 | overlap 1116063 1116081 CTTCGGGGACAGTAT TTTTTTATCAAAAC GTC GCTTTGATAGAGAG TTTTTATCAAATATG TERM 1384 1116480 - 1116492 + G 84 -7.7 -4.67556 | opp_overlap 1116480 ACGAAAAAGAGATTA TTGGC GTT GCCAA TTTTTCCAATGTTGT rimJ 1116215 - 1116799 + | ribosomal-protein-S5-alanine N-acetyltransferase yceH 1116810 - 1117457 + | hypothetical protein mviM 1117459 - 1118292 + | putative virulence factor TERM 1385 1118445 - 1118461 + F 100 -13.7 -4.11692 | ATTCGCCTCTTTCAG CGCCTGC CTT GCAGGCG TTTTGCCCGTGGGTC mviN 1118492 - 1120027 + | putative virulence factor TERM 1386 1120063 - 1120032 - T 72 -10.2 -2.77344 | gap 1, opp_overlap 1120031 1120034, overlap 1120031 1120035 GGACGGTGTAACAAT GCAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TATTCAGATCGAAAT TERM 1387 1120034 - 1120060 + T 86 -14.4 -2.75074 | opp_overlap 1120031 1120032 1120035, overlap 1120031 ACGGTGTAACAATGC ATTCCGGCCTGC AGT GCAGGCCGGAGA TAATATTCAGATCGA TERM 1388 1120059 - 1120035 - T 90 -15.7 -2.6563 | opp_overlap 1120034 1120031, overlap 1120031 1120032 CGGTGTAACAATGCA TTCCGGCCTGC AGT GCAGGCCGGAG ATAATATTCAGATCG flgN 1120483 - 1120067 - | flagella synthesis protein FlgN flgM 1120781 - 1120488 - | anti-sigma28 factor FlgM TERM 1389 1120525 - 1120552 + g 73 -4 -4.86621 | overlap 1120526 1120529 TGCGCTTCGTTGATC AGCGCATCGGCA ATTT TGCCGGTGTCCA TTTTTAGTTCACCGT flgA 1121516 - 1120857 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1390 1121730 - 1121712 - g 72 -10.2 -3.38991 | overlap 1121710 ACGTTTTCAACAAGA GGCGCTCA ATC TGCGCGCC CAGCGTCAGGAAGTG flgB 1121671 - 1122087 + | flagellar basal body rod protein FlgB TERM 1391 1122117 - 1122129 + F 73 -10.5 -3.05816 | GAATATTTTTGATAT CGCCG GGT CGGCG TTAACTGCCCAGTCC TERM 1392 1122330 - 1122315 - f 71 -7.6 -3.86015 | opp_overlap 1122306 CAGGCCCCGGACAAA CTGGTT TATG AACCAG GTAATCCGCTGGCAG TERM 1393 1122953 - 1122934 - g 86 -7.1 -4.88736 | opp_overlap 1122934 CATCACCGATAAAAA TGGCGCG GTTGTG CGCACCA TTGATATTGGTGAAC flgD 1122506 - 1123201 + | flagellar basal body rod modification protein TERM 1394 1124160 - 1124148 - g 70 -5.5 -4.32951 | opp_overlap 1124152 1124153, overlap 1124153 ATTCCAACGAACAAA CCCAA CTG CTGGG GCAGATTGTACTGGC flgE 1123226 - 1124434 + | flagellar hook protein FlgE TERM 1395 1124524 - 1124508 - f 70 -9.3 -3.35371 | opp_overlap 1124508, overlap 1124510 CAGACGCTGAATCAA CAGGCGG TAA CCGCCAG TAATCTGGCCAATGC TERM 1396 1124522 - 1124510 - f 74 -10.5 -3.24329 | opp_overlap 1124508, overlap 1124508 GACGCTGAATCAACA GGCGG TAA CCGCC AGTAATCTGGCCAAT flgG 1125343 - 1126125 + | flagellar basal body rod protein FlgG TERM 1397 1126133 - 1126151 + F 74 -8.1 -3.96337 | opp_overlap 1126133 AACTCTAAGGCATAA CCGGTGG CAGGT TCACCGG TTTACTGATTTTTGA flgH 1126178 - 1126876 + | flagellar basal body L-ring protein flgI 1126888 - 1127985 + | flagellar basal body P-ring protein flgJ 1127985 - 1128926 + | peptidoglycan hydrolase TERM 1398 1129385 - 1129369 - T 75 -11.5 -3.06737 | opp_overlap 1129378, overlap 1129360 GAGTAACGCGGAAGA CCCGGCG GCG CGCCAGG CGCTGATTGGGAAAT TERM 1399 1131630 - 1131658 + T 100 -16 -5.85178 | overlap 1131655 TGGGTATGTTTTGTC TGCCCGCTCTGG GATCG CCGGGGCGGGCA TTTTTTTTGCCTATT TERM 1400 1131763 - 1131744 - T 100 -11.4 -5.69793 | opp_overlap 1131744 1131740 1131736 ACATGAAATAAAAAA GCCCTGGC AGTT ACCAGGGC TTGATTACTTTGAGC TERM 1401 1131744 - 1131763 + T 79 -10.7 -3.5013 | opp_overlap 1131744, overlap 1131740 1131736 ACATGAAATAAAAAA GCCCTGG CAGTTA CCAGGGC TTGATTACTTTGAGC rne 1134976 - 1131785 - | ribonuclease E TERM 1402 1133371 - 1133398 + g 73 -9.2 -3.61894 | gap 1 GCGCTGGCGGTACAT CCGGCA-TGGCAA AGG TTGCCAGTGCAGG TTGTTCAGGACGCTT TERM 1403 1134374 - 1134388 + g 88 -5.6 -5.18357 | CAGGAACGGAGCCGG GCGGCT TTC AGCGGC TTTTTTGATGGCTTC S1169 1135057 - 1135431 + | hypothetical protein yceC 1135549 - 1136508 + | 23S rRNA pseudouridylate synthase C TERM 1404 1136579 - 1136532 - T 76 -11.8 -2.60219 | opp_overlap 1136540 1136541, overlap 1136531 1136550 1136551 TATAAGCCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCTGCAC CGATTGCCGGATGCG TERM 1405 1136605 - 1136550 - T 74 -10.3 -3.28712 | opp_overlap 1136541 1136540, overlap 1136532 1136531 1136551 CGGTTGGCCTGATAA GGCGTTTACGCCGCATCAGGCCGCC TGCACC GATTGCCGGATGCGACGTAACCGCA TCCGGCGCAAACAAC TERM 1406 1136604 - 1136551 - T 83 -13.8 -2.57132 | opp_overlap 1136541 1136540, overlap 1136532 1136531 1136550 GGTTGGCCTGATAAG GCGTTTACGCCGCATCAGGCCGCC TGCACC GATTGCCGGATGCGACGTAACCGC ATCCGGCGCAAACAA maf 1137204 - 1136620 - | Maf-like protein TERM 1407 1137316 - 1137305 - H 71 -3.6 -4.78077 | overlap 1137306 1137309 CTGAACGAAAATAAA GCAG TAAC CCGC AATGTGTGCGAATTA TERM 1408 1137335 - 1137363 + H 83 -10.3 -3.74077 | opp_overlap 1137341, overlap 1137341 GTGTGCGAATTATTG GCAAAAGGCAACC ACA GGCTGCCTTTTTC TTTGACTCTATGACG TERM 1409 1137341 - 1137357 + H 95 -7.9 -5.31519 | opp_overlap 1137341, overlap 1137335 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT TERM 1410 1137357 - 1137341 - H 83 -10.1 -4.12902 | opp_overlap 1137341 1137335 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT yceD 1137403 - 1137924 + | hypothetical protein rpmF 1137976 - 1138149 + | 50S ribosomal protein L32 TERM 1411 1138165 - 1138150 - f 70 -9 -3.34895 | opp_overlap 1138136 GTCATCGCTAAGTAA TCACGC GTCT GCGTGA TGAAGCTTAGTGAGG TERM 1412 1138286 - 1138315 + G 78 -10.7 -3.51032 | overlap 1138287 1138290 TTTTGGCCCTTCCGT GACAGTGCCTGCA GCAT TGCAGGCACTGAA TTCTAATTCGCAACT TERM 1413 1138287 - 1138314 + G 85 -14.2 -2.70298 | overlap 1138286 1138290 TTTGGCCCTTCCGTG ACAGTGCCTGCA GCAT TGCAGGCACTGA ATTCTAATTCGCAAC TERM 1414 1138290 - 1138311 + G 90 -14.5 -2.63347 | overlap 1138287 1138286 GGCCCTTCCGTGACA GTGCCTGCA GCAT TGCAGGCAC TGAATTCTAATTCGC plsX 1138230 - 1139300 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 1139368 - 1140321 + | 3-oxoacyl-(acyl carrier protein) synthase III fabD 1140337 - 1141266 + | acyl carrier protein S-malonyltransferase TERM 1415 1141318 - 1141298 - g 90 -7.5 -4.86621 | overlap 1141300 ATTTTGAAGGAAAAA TCGCACTGG TAA CCGGTGCAA GCCGCGGAATTGGCC fabG 1141279 - 1142013 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1142224 - 1142460 + | acyl carrier protein TERM 1416 1142496 - 1142468 - f 71 -9.6 -3.15056 | gap 1, opp_overlap 1142469 1142472, overlap 1142466 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTTGTCC TERM 1417 1142469 - 1142495 + F 100 -13.1 -5.02287 | gap 1, opp_overlap 1142468 1142466, overlap 1142472 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTTGTC TERM 1418 1142472 - 1142493 + F 90 -15.9 -2.72919 | opp_overlap 1142468 1142466, overlap 1142469 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTTG TERM 1419 1142920 - 1142900 - g 70 -3.9 -4.68384 | overlap 1142905 ACTGATCGAAGAAAA CCACACATC TCT GATGAACGG TGGTCCACGTAAGAT TERM 1420 1143216 - 1143191 - g 74 -10.3 -3.51329 | TACCCGCAATGATAA CCCGCAAGCGG CGAG CCGCCCGTGGG ATAAAGAGCGTGATG fabF 1142547 - 1143788 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1421 1143814 - 1143829 + F 100 -8.2 -5.52096 | opp_overlap 1143814 TCCACCCATATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT TERM 1422 1143829 - 1143814 - f 72 -6 -4.55287 | opp_overlap 1143814 TCCACCCATATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT pabC 1143908 - 1144717 + | 4-amino-4-deoxychorismate lyase yceG 1144720 - 1145742 + | hypothetical protein TERM 1423 1146191 - 1146176 - g 91 -11.8 -4.08692 | GAAGTTGGCTTAAAA CGCGCG CGTG CGCGCG GCGAGCTGGATCGTA tdk 1145732 - 1146373 + | thymidylate kinase TERM 1424 1146419 - 1146409 - g 81 -6.8 -4.59773 | CCTGATTTCGAAAAA CTGG TAG CCAG CTATCAGGCCGGAAG TERM 1425 1146775 - 1146789 + G 71 -2.8 -4.7497 | opp_overlap 1146785 ACGCTTGAAGAGCCA CCAG CAGAAAC CTGG TTTTTCCTGGCTACC TERM 1426 1146951 - 1146978 + G 72 -7.7 -3.90922 | gap 1 CGCATTGCGCTTAAG CGCCGGT-TCGC CTGGC GCGGCACTGGCG TTGTTTCAGGGAGAT TERM 1427 1147153 - 1147141 - g 81 -9.1 -4.09864 | ATGGATGCGCTAAAA CGCCA TCA TGGCG CTGCGCAGGTGACCA holB 1146370 - 1147374 + | DNA polymerase III subunit delta' ycfH 1147385 - 1148182 + | putative metallodependent hydrolase TERM 1428 1148254 - 1148227 - f 74 -8.4 -3.93057 | opp_overlap 1148245 1148246, overlap 1148228 GCTAAAACGAGTAAA GTTCACCGCCGA AAAT TGGGCGGTGAAT AACCGCGTTTGAAAT TERM 1429 1148253 - 1148228 - f 78 -11.9 -2.95111 | opp_overlap 1148245 1148246, overlap 1148227 CTAAAACGAGTAAAG TTCACCGCCGA AAAT TGGGCGGTGAA TAACCGCGTTTGAAA TERM 1430 1149321 - 1149304 - g 70 -4 -4.61566 | opp_overlap 1149304 1149302 TGCTAAACCAGAAAA CCGCGC GAAAGT GGGCGG TATTATGATCTCCGC ptsG 1148477 - 1149910 + | glucose-specific PTS system IIBC components TERM 1431 1149952 - 1149935 - f 81 -12.7 -3.25823 | opp_overlap 1149935 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT TERM 1432 1149935 - 1149952 + F 100 -12.7 -5.04987 | opp_overlap 1149935 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT TERM 1433 1150665 - 1150690 + F 76 -4.7 -4.88736 | gap 1, opp_overlap 1150663 1150665 CATTGATGTCAAACA CCAGACCAGCGT AAG GCG-TGGTGTGG TTTTTCTCCATGCTG TERM 1434 1152718 - 1152708 - g 75 -5.4 -4.59773 | CCGTAGCGGCAAAAA TTGC TGA GCAA GAAGGTATTGCCGAA ycfF 1152494 - 1152853 + | purine nucleoside phosphoramidase ycfL 1152856 - 1153233 + | hypothetical protein ycfM 1153248 - 1153889 + | hypothetical protein TERM 1435 1153899 - 1153920 + G 91 -9.4 -4.58685 | CAATAATCCCATCAC GCGCGACG AATTGC TGTCGCGC TTTTTCCCGCAGTTT thiK 1153870 - 1154694 + | thiamine kinase TERM 1436 1155599 - 1155609 + G 70 -6.8 -4.08706 | opp_overlap 1155599 CCGATCAAGGCAGAA CGTG TTA CACG TTTGTATCATAAAGG ycfO 1154705 - 1155730 + | beta-hexosaminidase ycfP 1155753 - 1156295 + | hypothetical protein ndh 1156703 - 1158007 + | respiratory NADH dehydrogenase TERM 1437 1158074 - 1158106 + F 76 -12 -2.60723 | opp_overlap 1158083, overlap 1158073 TGGTACGAGCGGTAG GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC ATTCCTTCAGACTCC ycfJ 1158234 - 1158773 + | hypothetical protein TERM 1438 1158795 - 1158823 + T 100 -12.4 -5.06103 | TGTACTCTGCAATTT GGCCCCTCATTC GCTCA GGCTGAGGGGCC TTTTTTGCGACTTAT ycfQ 1159545 - 1158835 - | hypothetical protein TERM 1439 1159423 - 1159433 + g 100 -2.4 -5.77853 | GTCGAACACTTTTGG GCGG CCA CGGC TTTTTTTTACACATT TERM 1440 1159737 - 1159724 - H 70 -2.3 -4.92239 | opp_overlap 1159729 TGAAAAACGTAAAAA CCTCA TCGC TGCGG CGATTTTAAGCTCCA ycfR 1159752 - 1159964 + | hypothetical protein TERM 1441 1160003 - 1160029 + T 100 -18.8 -5.93809 | CTACTGCTGATTTTT TCCCCGCGACAT GCC GTGTCGCGGGGA TTTTTTTTATCCAGG ycfS 1161009 - 1160047 - | hypothetical protein TERM 1442 1161123 - 1161144 + r 72 -10.8 -2.84878 | overlap 1161122 TGTAAATGTTGCAGA TGGGGGCG CAGAAA CGCCCCCG ATTTACATTAAGCGA mfd 1164598 - 1161152 - | transcription-repair coupling factor TERM 1443 1162114 - 1162126 + g 70 -6.9 -4.01564 | GCACCAGTTCTGCCA GCCGT TCG GCGGC TTTCTGAATGTTTTC TERM 1444 1163369 - 1163379 + g 72 -5.4 -4.45544 | opp_overlap 1163356 AAGACGCATAATGCG TTGC GGA GCAA TTTTAATTCGTGCGA TERM 1445 1163479 - 1163494 + g 77 -3.2 -5.07486 | opp_overlap 1163475, overlap 1163475 CGAGGAACTTACGCA GCGC ATCCAGCG GCGC TTTTTGTTGCGCCTG ycfT 1165799 - 1164726 - | hypothetical protein TERM 1446 1165144 - 1165129 - G 81 -9 -4.08651 | opp_overlap 1165143, overlap 1165141 ACGGTAAGCAAAGAA GCCATC AGCA GATGGC GGCGCAACGGCACCT TERM 1447 1166791 - 1166778 - g 90 -8.1 -4.77157 | overlap 1166771 TTAAGTCAGCAAAAA CTGCC TGAA GGCAG CAAATGGCAGGACTG ycfU 1166061 - 1167260 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1167253 - 1167954 + | lipoprotein transporter ATP-binding subunit ycfW 1167954 - 1169198 + | outer membrane-specific lipoprotein transporter subunit LolE ycfX 1169227 - 1170138 + | N-acetyl-D-glucosamine kinase TERM 1448 1170218 - 1170202 - g 75 -4.4 -4.85782 | gap 1, opp_overlap 1170202 1170205 1170208, overlap 1170204 TTTCGTAAAAATAAA CG-TCGC CTGC GCGAGCG TTTGCGTCAGCGTAT TERM 1449 1170221 - 1170232 + G 82 -2.2 -5.41143 | overlap 1170208 1170205 GCCTGCGCGAGCGTT TGCG TCAG CGTA TTTTTTTCAGAGATA cobB 1170154 - 1170975 + | NAD-dependent deacetylase TERM 1450 1171099 - 1171122 + T 71 -9.5 -3.22091 | opp_overlap 1171100, overlap 1171100 CTTGCTAACTAAAAA ACGGGCGGT AATACC ACCGCCCGC TTGCTGAATTAACGT TERM 1451 1171121 - 1171100 - T 100 -13.7 -5.26875 | opp_overlap 1171100 1171099 TTGCTAACTAAAAAA CGGGCGGTA ATAC CACCGCCCG CTTGCTGAATTAACG TERM 1452 1171100 - 1171121 + T 80 -13 -2.52933 | opp_overlap 1171100, overlap 1171099 TTGCTAACTAAAAAA CGGGCGGT AATACC ACCGCCCG CTTGCTGAATTAACG potD 1172177 - 1171131 - | spermidine/putrescine ABC transporter periplasmic substrate-binding protein potC 1172968 - 1172174 - | spermidine/putrescine ABC transporter membrane protein potB 1173822 - 1172965 - | spermidine/putrescine ABC transporter membrane protein potA 1174942 - 1173806 - | putrescine/spermidine ABC transporter ATPase protein TERM 1453 1175853 - 1175841 - g 77 -2.7 -5.0916 | opp_overlap 1175841 CGGTCAATATAAAAA TTGTC GGT AACAA TGTTCATCCGGGCAC pepT 1175192 - 1176418 + | peptidase T TERM 1454 1176452 - 1176426 - T 83 -9.4 -4.32201 | opp_overlap 1176426, overlap 1176427 GGAAGTAAGCGAAAA GGGATGCGGCAT GTG ATGCTGCATCCG GCTTAAATCCAAACT TERM 1455 1176451 - 1176427 - T 83 -12.9 -3.18598 | opp_overlap 1176426, overlap 1176426 GAAGTAAGCGAAAAG GGATGCGGCAT GTG ATGCTGCATCC GGCTTAAATCCAAAC ycfD 1177597 - 1176467 - | hypothetical protein S1211 1177837 - 1179066 + | putative integrase of prophage CP-933C TERM 1456 1179054 - 1179077 + F 75 -2.6 -5.1287 | gap 1, overlap 1179056 CACGCTACCAGTAGC CA-GAAGAAAA TAA TTTTTTTCGTG TTTTTTCAGTATGCG TERM 1457 1179278 - 1179256 - f 85 -5.6 -5.30686 | opp_overlap 1179256 AATAGCGAGAAAAAA GGCATGAAAC AAT ATTTTATGCC TTTGTATTAACATGA TERM 1458 1179256 - 1179278 + F 74 -7.1 -4.20368 | opp_overlap 1179256 AATAGCGAGAAAAAA GGCATGAAA CAATA TTTTATGCC TTTGTATTAACATGA TERM 1459 1179803 - 1179783 - f 100 -11.8 -5.64274 | opp_overlap 1179782 1179783 TCAGGCATAAAAAAA GCGGCCCC GAAAT GGAGCCGC CTTTCTGAACAGATA TERM 1460 1179783 - 1179803 + F 72 -10.3 -2.91593 | opp_overlap 1179783, overlap 1179782 TCAGGCATAAAAAAA GCGGCCCCG AAA TGGAGCCGC CTTTCTGAACAGATA TERM 1461 1180124 - 1180096 - f 75 -9.5 -3.51232 | opp_overlap 1180095, overlap 1180097 GCGCCTGTAAAGCAA TGCGCCGTAGTAC CTC ACACCACGGCGCT GATAGTTTTTATCCT TERM 1462 1180123 - 1180097 - f 81 -13 -2.70525 | opp_overlap 1180095, overlap 1180096 CGCCTGTAAAGCAAT GCGCCGTAGTAC CTC ACACCACGGCGC TGATAGTTTTTATCC TERM 1463 1180415 - 1180377 - g 74 -2.4 -5.1485 | gap 1, opp_overlap 1180382, overlap 1180382 CAATCAACACAAAAA GCAAAGCCCCG-CACTG TAGGAG CAGTAACGGGGCTTCTA ACCAACAACGTAAAC TERM 1464 1180410 - 1180382 - g 81 -8.9 -4.41882 | gap 1, opp_overlap 1180382, overlap 1180377 AACACAAAAAGCAAA GCCCCG-CACTG TAGGAG CAGTAACGGGGC TTCTAACCAACAACG S1212 1180340 - 1180642 + | hypothetical protein S1214 1181307 - 1181606 + | hypothetical protein TERM 1465 1181640 - 1181630 - g 88 -2.4 -5.53288 | CCGAACGTAAAAAAA CAGC CAC GCGG AATAAAACACAAAGA TERM 1466 1182334 - 1182318 - g 74 -7.9 -4.13767 | CGCTTGACCTGAAAA CGGGGGA ATT TTCCCCG CACACGCCGGAGAAC TERM 1467 1182755 - 1182735 - g 70 -3.9 -4.71426 | overlap 1182736 CGGGCATCAAGAAAA TCACGGG CGGTGAC CCCGTGG AAATTAACCCGAAAT S1215 1181603 - 1183351 + | bacteriophage P4 DNA primase TERM 1468 1183330 - 1183342 + F 77 -3.3 -5.14894 | opp_overlap 1183330 CGCAATAACAACAGA CGAGT GCG ACGCG TTTTTATAATTTTTT S1216 1183718 - 1183918 + | hypothetical protein S1217 1183915 - 1184220 + | hypothetical protein S1218 1184230 - 1184391 + | hypothetical protein TERM 1469 1184415 - 1184430 + F 100 -10.4 -5.49729 | GAACCACACCACGCA GCCGGA GCAA TCCGGC TTTTTTTGCGTCATT S1219 1184533 - 1184757 + | hypothetical protein TERM 1470 1184793 - 1184778 - f 73 -10.4 -3.04983 | opp_overlap 1184778 CATACAGCACATACA GCCGGA GCAA TCCGGC TTTTTGTTATTTTTT TERM 1471 1184778 - 1184793 + F 100 -10.4 -5.54403 | opp_overlap 1184778 CATACAGCACATACA GCCGGA GCAA TCCGGC TTTTTGTTATTTTTT TERM 1472 1184896 - 1184919 + F 72 -8.8 -3.57615 | TGATTATTCTCGCCC GTGGTGCCAG GACG CTGGGGCCAC TTTCCCGCCTGTTAA TERM 1473 1185021 - 1185050 + F 100 -7.9 -5.60993 | TTGAGTGTTTGCCGC GTCCTGGAGTT CCTTACTT AACCCCAGGAC TTTTTTTATGCAGAG TERM 1474 1185882 - 1185865 - f 77 -3.3 -5.1101 | overlap 1185867 GCATTACGTAAAAAA TACCGCA AAAA CGCGGTC TGAGTGGTTAACTCC TERM 1475 1186221 - 1186250 + F 86 -9.3 -4.42386 | opp_overlap 1186228, overlap 1186228 CGACGATTAACAGCA TACAGAAGGGGCT AAAA AGCCCCTTTAGTG TTTTATGGGTGAAAA TERM 1476 1186228 - 1186243 + F 87 -10.4 -4.10958 | opp_overlap 1186228, overlap 1186221 TAACAGCATACAGAA GGGGCT AAAA AGCCCC TTTAGTGTTTTATGG TERM 1477 1186243 - 1186228 - f 79 -10.4 -3.64431 | opp_overlap 1186221 1186228 TAACAGCATACAGAA GGGGCT AAAA AGCCCC TTTAGTGTTTTATGG S1222 1186255 - 1186827 + | putative head maturation protease of prophage CP-933C TERM 1478 1187577 - 1187559 - g 72 -4.4 -4.60924 | overlap 1187560 1187561 GAAACGCCGGAAAAA CGCCCATC CTT GAAGGGGG GATGAGCTATCAGCA S1223 1186865 - 1187992 + | putative head portal protein S1224 1188037 - 1188375 + | putative head-tail adaptor S1225 1188372 - 1188668 + | hypothetical protein S1226 1188896 - 1189108 + | putative holin protein of prophage CP-933C TERM 1479 1189148 - 1189121 - f 72 -4.8 -4.64676 | opp_overlap 1189109, overlap 1189109 TGAGCGGGAACAAAA CCGCCTTATCCG TGGA CTTATAAGGCAG CGTGACGCATGGAAG TERM 1480 1189202 - 1189191 - f 72 -5.8 -4.40003 | GGGCATAAAGATAAA GCGT CAGG ACGC GCAGAACGCATCACA S1227 1189345 - 1189656 + | hypothetical protein S1228 1189823 - 1191301 + | putative terminase of prophage CP-933C S1229 1191315 - 1191596 + | hypothetical protein TERM 1481 1191630 - 1191617 - T 76 -8.1 -4.12738 | TGAGATTAAAGCAAA GCGCA AAAT TGCGC TGGCTACATCCCTCA TERM 1482 1191900 - 1191886 - T 73 -4.2 -4.84761 | opp_overlap 1191888 1191897, overlap 1191888 ACACCGTGACAAAAA GACGGT TTA ACCGTT CATTAAAAATCGACG TERM 1483 1191898 - 1191888 - T 71 -6.8 -4.04397 | opp_overlap 1191888 1191897, overlap 1191886 ACCGTGACAAAAAGA CGGT TTA ACCG TTCATTAAAAATCGA TERM 1484 1191935 - 1191951 + T 83 -6.6 -5.00616 | TTTGTGCTTTCCGGA TGACGT GGCCA ACGTCA TTTTTTAGCGAAAAA phoQ 1193853 - 1192393 - | sensor protein PhoQ TERM 1485 1193002 - 1193012 + g 77 -8.2 -4.13014 | CGTACTTTGCAGCAC CGCC AGT GGCG TTTTCAGACTATGGG TERM 1486 1193036 - 1193075 + g 72 -4.3 -4.60041 | gap 1 CTATGGGTCAGGTCG GTGAGCGTCGTACGGTAT TTGTC GTAACGTTCG-CGTTCAC TTTTTAACAATCGGT phoP 1194524 - 1193853 - | DNA-binding transcriptional regulator PhoP TERM 1487 1194684 - 1194653 - R 76 -9.4 -3.6968 | gap 1, opp_overlap 1194653 1194654 1194656, overlap 1194654 1194656 GGATAATCTTAATAA GCAG-GCCGGACAGC ATC GCCATCCGGCACTGA TTTGAGGCTTATTTC TERM 1488 1194683 - 1194654 - R 82 -12.9 -2.81326 | gap 1, opp_overlap 1194654 1194653 1194656, overlap 1194653 1194656 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG ATTTGAGGCTTATTT TERM 1489 1194680 - 1194656 - R 70 -9.9 -2.94759 | opp_overlap 1194654 1194653 1194656, overlap 1194654 1194653 TAATCTTAATAAGCA GGCCGGACAGC ATC GCCATCCGGCA CTGATTTGAGGCTTA purB 1196063 - 1194693 - | adenylosuccinate lyase ycfC 1196708 - 1196067 - | hypothetical protein TERM 1490 1196568 - 1196549 - G 75 -5.7 -4.59773 | gap 1, opp_overlap 1196550, overlap 1196550 CGCTACCGCCAAAAA CCGCCAGC GTCGA GCTGG-GG TTCATATCAATAATA trmU 1197850 - 1196744 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1491 1197760 - 1197746 - G 72 -7.8 -3.86346 | opp_overlap 1197748 CCAGTTCTTCATAAA CAGGCC TTC GACCTG ATATCCCTGTTGTTG S1236 1198365 - 1197904 - | putative phosphohydrolase ymfC 1198998 - 1198375 - | 23S rRNA pseudouridine synthase E TERM 1492 1198976 - 1198988 + g 77 -2.7 -5.11613 | overlap 1198977 CGCTTAACCTGGTGA TTTCT AAA AGAAG TTTTTTGCATGGTAT icdA 1199200 - 1200450 + | isocitrate dehydrogenase TERM 1493 1200473 - 1200497 + T 100 -10 -5.05113 | opp_overlap 1200476, overlap 1200476 ATGTGTTAAATATTT AAACGGGCGT ATAAC ACGCCCGTTG TTTTATTTATGTGGA TERM 1494 1200494 - 1200476 - T 93 -12.4 -3.81137 | opp_overlap 1200473 1200476 TGTTAAATATTTAAA CGGGCGTA TAA CACGCCCG TTGTTTTATTTATGT TERM 1495 1200476 - 1200494 + T 100 -11.7 -4.60302 | opp_overlap 1200476, overlap 1200473 TGTTAAATATTTAAA CGGGCGT ATAAC ACGCCCG TTGTTTTATTTATGT S1239 1201060 - 1200557 - | IS1 orfB S1240 1201254 - 1200979 - | IS1 orfA TERM 1496 1202126 - 1202138 + G 70 -4.8 -4.57837 | GGGCAATAAATAATG GGGA GATCG TCCC TTTTTACCAACCTGT S1241 1201348 - 1202871 + | hypothetical protein TERM 1497 1204244 - 1204220 - g 70 -5.7 -4.34912 | AAGTAATGAAAATAA TGCCATAGCAA AAC TGGATATGGCA AAAGGGGAGATCACA TERM 1498 1204672 - 1204686 + G 76 -4.2 -4.88736 | CGGATAGTGAGGTAT CATCGG CTG CAGATG TTTTTATCAATAATA S1242 1203948 - 1206269 + | hypothetical protein TERM 1499 1206312 - 1206290 - T 100 -12 -5.08824 | CCGTTAGCTAAAAAA CCGCGTCG TATTCAT CGACGCGG TACATATGAAATATT S1244 1206661 - 1206326 - | hypothetical protein S1245 1206949 - 1206665 - | hypothetical protein S1246 1207717 - 1207929 + | hypothetical protein TERM 1500 1207960 - 1207945 - T 84 -10.4 -3.85704 | opp_overlap 1207945 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGA TERM 1501 1207945 - 1207960 + T 93 -10.4 -4.54727 | opp_overlap 1207945 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGA TERM 1502 1208026 - 1208007 - T 90 -7 -5.40072 | overlap 1208008 TCTGGGGCAAAAAAA GCCCGCCA GTTA CGGCGGGA AACCTCATCCTATGG TERM 1503 1208025 - 1208008 - T 83 -10.5 -3.83561 | overlap 1208007 CTGGGGCAAAAAAAG CCCGCCA GTTA CGGCGGG AAACCTCATCCTATG TERM 1504 1208276 - 1208249 - T 100 -11.4 -4.76041 | overlap 1208250 GAGAGGGATGAAAAA CTCAAGGCAGAA ATGA CTCTGCCTTGAA GATAAATGCGTTTTT TERM 1505 1208275 - 1208250 - T 85 -12.7 -3.44902 | overlap 1208249 AGAGGGATGAAAAAC TCAAGGCAGAA ATGA CTCTGCCTTGA AGATAAATGCGTTTT minE 1208567 - 1208301 - | cell division topological specificity factor MinE minD 1209383 - 1208571 - | cell division inhibitor MinD minC 1210102 - 1209407 - | septum formation inhibitor S1251 1211730 - 1210825 - | insertion element IS2 transposase InsD TERM 1506 1212379 - 1212410 + H 73 -10.2 -3.01914 | gap 1, overlap 1212378 1212373 1212387 GAGTGGGGCGTTAAC GTCTA-TGACGGGGA TAG TCCCCGTCGGTTGAC ATTTACTTAATTTGA TERM 1507 1212387 - 1212401 + H 73 -11.4 -2.56046 | overlap 1212379 1212378 1212373 CGTTAACGTCTATGA CGGGGA TAG TCCCCG TCGGTTGACATTTAC S1253 1212776 - 1213075 + | IS3 orfA TERM 1508 1213349 - 1213322 - g 75 -4.7 -4.74103 | overlap 1213323 1213324 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC S1254 1213072 - 1213926 + | IS3 orfB TERM 1509 1214170 - 1214182 + F 74 -3.3 -5.00616 | opp_overlap 1214170 1214171, overlap 1214155 CTGCGTTCGGTAAAA TCCCG GCG CGGCA TTTTTTGCCGGGGGG ycgL 1214284 - 1214610 + | hypothetical protein S1257 1214682 - 1215341 + | hypothetical protein ycgN 1215433 - 1215879 + | hypothetical protein umuD 1217359 - 1217778 + | DNA polymerase V subunit UmuD umuC 1217778 - 1219046 + | DNA polymerase V subunit UmuC TERM 1510 1219083 - 1219066 - T 100 -12.7 -5.14965 | AGCGGCAGGAAAAAA GCGCTCC CGCA GGAGCGC CGAATGGATTAGCGA dsbB 1219622 - 1219092 - | disulfide bond formation protein B TERM 1511 1219249 - 1219216 - G 81 -4.5 -5.1287 | gap 1, overlap 1219218 TCCATACCTAAAAAA TC-CCACTGACGCTCG GCG CAATCGCCAGAGGCGA CAAACACTTGCGGCA TERM 1512 1219734 - 1219761 + r 79 -9.8 -3.79113 | opp_overlap 1219732 1219738, overlap 1219738 TATCGGGCGAAAAGG CAAACCGGGCAT TTAT ATGCCCGGTAAG TTGTTATCAAAGCGT TERM 1513 1219757 - 1219738 - R 100 -13.6 -3.92659 | opp_overlap 1219734 1219738, overlap 1219732 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA TERM 1514 1219738 - 1219757 + r 83 -13.6 -2.68806 | opp_overlap 1219738 1219732, overlap 1219734 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA nhaB 1221309 - 1219768 - | sodium/proton antiporter TERM 1515 1220251 - 1220233 - G 80 -5.3 -4.88736 | gap 1 GACTACCGAGAAAAA CACCGTCA ACAG TG-CGGTG AATGGCAGAGATTCG fadR 1221530 - 1222249 + | fatty acid metabolism regulator TERM 1516 1222272 - 1222287 + T 100 -10.4 -5.80727 | opp_overlap 1222272 1222271 CGTTTAAAGAGCAAC CCCCTC AAAC GAGGGG TTTTTTGTTGTTTTT TERM 1517 1222287 - 1222272 - T 71 -10.4 -2.67021 | opp_overlap 1222272, overlap 1222271 CGTTTAAAGAGCAAC CCCCTC AAAC GAGGGG TTTTTTGTTGTTTTT ycgB 1223833 - 1222301 - | hypothetical protein TERM 1518 1223244 - 1223256 + g 76 -4.1 -5.01732 | TGCCGGGCTTTCTCT TCTTG CAG CGAGA TTTTTTGCGGGCGTT dadA 1224163 - 1225461 + | D-amino acid dehydrogenase small subunit dadX 1225471 - 1226541 + | alanine racemase TERM 1519 1226648 - 1226674 + T 88 -12.5 -3.53224 | opp_overlap 1226650 AGCCATTGCCCATGA TAGTGTCCATT AAAAG AATGGACACTA TTTCCCCGGAACCTG TERM 1520 1226672 - 1226650 - T 72 -10.7 -2.78816 | opp_overlap 1226648 CCATTGCCCATGATA GTGTCCATT AAAAG AATGGACAC TATTTCCCCGGAACC ipaH_3 1228004 - 1227396 - | invasion plasmid antigen fragment S1269 1230467 - 1228731 - | potassium/proton antiporter ldcA 1231476 - 1230562 - | L,D-carboxypeptidase A mltE 1231462 - 1232187 + | murein transglycosylase E TERM 1521 1232195 - 1232209 + Tr 74 -5.6 -4.58283 | CGATGTAAATCAGTC GCGCAC TTT GTCCGC TTTTTCCCGGGCTTC ycgR 1232923 - 1232189 - | hypothetical protein ymgE 1233124 - 1233378 + | hypothetical protein TERM 1522 1233421 - 1233390 - T 70 -9.4 -3.33583 | opp_overlap 1233391, overlap 1233391 ATAAGATTTTCATAA GGCGGATAGCGATA CAGA TGCCGCTATCCGCT TTCACATCAGAACGT TERM 1523 1233420 - 1233391 - T 81 -12.9 -2.59668 | opp_overlap 1233391, overlap 1233390 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 1524 1233391 - 1233420 + T 90 -12.9 -3.59979 | opp_overlap 1233391 1233390 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 1525 1234444 - 1234456 + T 100 -4.7 -5.93252 | opp_overlap 1234444 TGTAATCGGAATAAT GGCTG TAG CTGCC TTTTTTATTTTTCAA modD 1236262 - 1235408 - | molybdenum transport protein ModD S1277 1237071 - 1236262 - | hypothetical protein TERM 1526 1236973 - 1236998 + g 91 -5.3 -5.37043 | TTCCGCCATTTTCTC CGCCCGTTGAT CCCA GTGATCGGGCG TTTTTTCTGTGCGGT S1278 1237839 - 1237081 - | putative ferric enterobactin transport ATP-binding protein S1279 1238816 - 1237836 - | putative iron compound ABC transporter permease protein S1280 1239838 - 1238816 - | putative ATP-binding protein of ABC transporter TERM 1527 1239887 - 1239862 - R 84 -8.5 -4.67038 | TCCTGAAAAGTAAAA TCGATATATAC TTTC ATATATATCGA TAAAAATCATGTTCA S1281 1241054 - 1240551 - | IS1 orfB S1282 1241248 - 1240973 - | IS1 orfA TERM 1528 1242139 - 1242128 - R 79 -4.4 -5.24129 | opp_overlap 1242128, overlap 1242135 1242137 TCTGTGTAGAAAAAA CCAT AGAT ATGG TGTTATCTGCCGACA TERM 1529 1242139 - 1242196 + r 71 -10.6 -2.74563 | gap 1, opp_overlap 1242137 1242135 1242156, overlap 1242156 AAAACCATAGATATG GTGTTATCTGCCGACAACGCCATCCGG AGAAG CCGAATGACGTTGTCGG-AGTAAGCGC TGGTTAAGGTGTGGG TERM 1530 1242180 - 1242156 - R 71 -10 -3.29511 | opp_overlap 1242139 1242156, overlap 1242137 1242135 GTTATCTGCCGACAA CGCCATCCGG AGAAG CCGAATGACG TTGTCGGAGTAAGCG treA 1243897 - 1242200 - | trehalase ycgC 1245635 - 1244217 - | dihydroxyacetone kinase subunit M TERM 1531 1245122 - 1245107 - G 74 -8.2 -4.00066 | overlap 1245110 TCGATAAGGTATAAA CCAGCC GGGA GGCCGG ACGTACATGCAGGCC S1286 1246278 - 1245646 - | dihydroxyacetone kinase ADP-binding subunit TERM 1532 1245694 - 1245750 + g 73 -9.4 -3.5774 | gap 1, opp_overlap 1245687 1245741, overlap 1245748 CATAAACATCACCGA GGTCGCGCCGG-GATCCTGGTGACC AATACTGC GTTCACCGAGATAACTGGCGCGGCC TTTGCGGGCTTGCAT S1287 1247389 - 1246289 - | dihydroxyacetone kinase subunit DhaK TERM 1533 1247474 - 1247494 + H 70 -9.9 -2.97934 | opp_overlap 1247474 1247473 1247476, overlap 1247476 AAAATTAGCCCAAAT TATGTTTCA TAG TGAAACATA TGCTTTAATGAATGT TERM 1534 1248468 - 1248480 + G 79 -4.7 -4.90302 | opp_overlap 1248468 ACCGATAATAGAAAC GCAGG GAA CCAGC TTTATTTTGTTGCTC TERM 1535 1248834 - 1248846 + G 72 -6.9 -4.15788 | GCTGGAACTGGCACA CGGCG GCA CGCTG TTTCTTGAAAAGATT S1288 1247578 - 1249506 + | DNA-binding transcriptional regulator DhaR S1289 1252473 - 1249606 - | putative adhesion and penetration protein TERM 1536 1253234 - 1253261 + r 75 -11.4 -3.10537 | opp_overlap 1253239, overlap 1253239 GGACTCGGTGAAATG AAAAATCCACGC AATT GCGTGGATTTTA TATACTTTTGCGCTC TERM 1537 1253239 - 1253256 + r 95 -11.3 -4.6709 | opp_overlap 1253239, overlap 1253234 CGGTGAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG TERM 1538 1253256 - 1253239 - R 100 -11.3 -4.98531 | opp_overlap 1253239 1253234 CGGTGAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG ychF 1254408 - 1253317 - | translation-associated GTPase TERM 1539 1253873 - 1253887 + g 70 -7.1 -4.11216 | CTTAAATCCAGCGCG CGCAG CATAC CTGCG TTTTCCAGCTGGGGC TERM 1540 1253947 - 1253958 + g 72 -5.8 -4.38927 | TTTCGCGTCTTTATC GCCA CCTT TGGC TTTCTTCTGTACGCG pth 1255109 - 1254525 - | peptidyl-tRNA hydrolase TERM 1541 1255195 - 1255179 - H 73 -2.2 -5.24129 | CCGCTTGACAAAAAA CTGCGT ATCAA ATGCAG ATAACGTAATAATTG ychH 1255387 - 1255665 + | hypothetical protein TERM 1542 1255682 - 1255711 + T 74 -11.5 -2.87963 | overlap 1255682 AAATAATGCAGTTTG CTGACCAGTCAGT TTGC GCTGACTGGTCAA TCTCGTACTTATAAA ychM 1257372 - 1255720 - | putative sulfate transporter YchM TERM 1543 1257505 - 1257492 - R 100 -9.5 -5.76633 | opp_overlap 1257492 1257490 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT TERM 1544 1257492 - 1257505 + r 73 -9.5 -3.34894 | opp_overlap 1257492, overlap 1257490 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT prsA 1258471 - 1257524 - | ribose-phosphate pyrophosphokinase TERM 1545 1258602 - 1258588 - R 75 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAACTCAGCTTGCC ychB 1259473 - 1258622 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 1260096 - 1259473 - | outer membrane lipoprotein LolB TERM 1546 1259548 - 1259558 + g 75 -6.8 -4.371 | overlap 1259544 CATATTGGCTGGCAT CGCA GGT TGCG TTTTGGTGTCATAAC TERM 1547 1259699 - 1259724 + g 73 -9.1 -3.5882 | CACTGGCGCAAGCTG TTGAGCGGAAT TGGC ATTCCGGTCAA TTTGCCAATCATCTC hemA 1260310 - 1261566 + | glutamyl-tRNA reductase TERM 1548 1262422 - 1262405 - g 79 -4.1 -5.1523 | TTCACAACATAAAAA CAAAGCG AAGG CGCTTTC AGTGCTCGGTGCTCG prfA 1261608 - 1262690 + | peptide chain release factor 1 TERM 1549 1263506 - 1263490 - g 72 -10.1 -3.31792 | TGACTATGGTGATAA CGAGCGC GTA ACGCTCG GCCGCTATTATCAAT hemK 1262690 - 1263523 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase S1300 1263520 - 1263912 + | putative transcriptional regulator ychA 1263916 - 1264725 + | putative transcriptional regulator kdsA 1264761 - 1265615 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1550 1265638 - 1265660 + T 100 -9.2 -5.1675 | opp_overlap 1265638 TGCTTGAAAAATAAA GTCTTAGCGT TCT GCGTTAAGAC TTTTTTCATGGGTAC TERM 1551 1265660 - 1265638 - T 80 -6.3 -4.85782 | opp_overlap 1265638 TGCTTGAAAAATAAA GTCTTAGCG TTCTG CGTTAAGAC TTTTTTCATGGGTAC TERM 1552 1265714 - 1265689 - T 100 -13.3 -5.43414 | opp_overlap 1265688 1265687 1265708 ACCAGATACAAAAAA GGCCGCAGG CTGTTACC CCTGCGGCC GGTTTCGGGCGCATA TERM 1553 1265720 - 1265755 + T 76 -7.5 -4.21768 | gap 1, overlap 1265708 CCCTGCGGCCGGTTT CGGGCG-CATATTGCC ATCAC GGCAGCCTGACGCCCG TTTTCACCTTACTTC TERM 1554 1265937 - 1265978 + T 80 -6.5 -4.78848 | gap 1, overlap 1265902 1265901 1265900 TGGTTTCAAGATTAG CCCCCGTTTTGTTGTCAGGT TTT ACCTCTCAACGTG-CGGGGG TTTTCTCTTTCCAGC chaA 1267376 - 1266276 - | calcium/sodium:proton antiporter TERM 1555 1267787 - 1267766 - g 72 -6.5 -4.30253 | overlap 1267769 TATAAAGATAAAGAA GATCGGCGT GATG ACGCCAGTC GCGAAGAAACCGCGC chaB 1267646 - 1267876 + | cation transport regulator chaC 1268013 - 1268729 + | cation transport regulator ychN 1269126 - 1268773 - | hypothetical protein ychP 1269452 - 1270705 + | hypothetical protein narL 1271356 - 1270706 - | transcriptional regulator NarL narX 1273145 - 1271349 - | nitrate/nitrite sensor protein NarX TERM 1556 1271423 - 1271400 - G 70 -6 -4.15044 | gap 1, opp_overlap 1271400 TTTTTCGGGAATAAA GGTGACCACCA CTT CGGT-GCCACC TGATTCACGACGGCG TERM 1557 1271930 - 1271905 - G 74 -8.3 -3.92542 | TGCATCTGTAAACAA CTCACCTGCAT CTTC ATGCAAGAGAG AGATTGGGCAATAGA TERM 1558 1272112 - 1272088 - G 79 -12.1 -3.04144 | TGGTCATGGCTAAGA TGACGCCCCTG CGG CAGGGTCGCCA GCAAAATACCGTACT TERM 1559 1273351 - 1273333 - H 74 -5.4 -4.60487 | overlap 1273335 CAGCACCGTGAAAAA TCTCATAA TTT TTATGAAA TCACTGTACTCACTA TERM 1560 1273670 - 1273680 + G 81 -6.8 -4.67038 | opp_overlap 1273670 GTTGCGGTGAACTTA CCGA AAG TCGG TTTTAATTTTACGAC narK 1273484 - 1274875 + | nitrate transport protein nark TERM 1561 1274899 - 1274917 + F 100 -16 -5.64274 | ATTTGATTATCCTTT GCGCGGCA TGA TGCCGCGC TTTTTTTATGCGTCA TERM 1562 1275082 - 1275102 + F 73 -11.3 -2.57988 | opp_overlap 1275085, overlap 1275081 1275079 ATAAAACGTCTTAAT TTACAGCAT GTT ATGCTGTAA CTGTTAATTATCCTA TERM 1563 1275554 - 1275535 - g 76 -10.6 -3.32769 | opp_overlap 1275553, overlap 1275528 CTGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG TGCCAGCTACTCCTG TERM 1564 1277669 - 1277682 + G 72 -6.7 -4.1552 | ACGACATGAATACTT CGGAT ATGC ATCCG TTTATTCACCCGCTG narG 1275268 - 1279011 + | nitrate reductase 1 alpha subunit TERM 1565 1279105 - 1279091 - g 75 -5.6 -4.60041 | AGTTACCTGTAAAAA CGTCTG GAC CAGCCG TGAAGGCGTGGAATA narH 1279008 - 1280546 + | nitrate reductase 1, beta subunit TERM 1566 1280680 - 1280654 - g 73 -9.5 -3.5771 | opp_overlap 1280659, overlap 1280644 1280657 AAAAATCTGTCGAAA GAAGATGCCCA TGCGC TGGGCATTTTC CTGCGCGATTTAACG TERM 1567 1280659 - 1280675 + G 76 -8 -4.25848 | opp_overlap 1280657 1280654 1280644 TCTGTCGAAAGAAGA TGCCCA TGCGC TGGGCA TTTTCCTGCGCGATT narJ 1280543 - 1281253 + | nitrate reductase 1, delta subunit narI 1281253 - 1281930 + | nitrate reductase 1, cytochrome b(NR), gamma subunit TERM 1568 1281952 - 1281967 + T 100 -8.2 -5.60993 | opp_overlap 1281952 TTTAGTTCACATAGA CCCTGC TTCG GCGGGG TTTTTTTATGGGCAC purU 1283556 - 1282714 - | formyltetrahydrofolate deformylase TERM 1569 1282759 - 1282747 - G 77 -6.9 -4.44448 | ATTACCGTAAACAAA GACGC GTT GCGCC AGTACTTTGTATAGC ychJ 1284064 - 1283606 - | hypothetical protein ychK 1284177 - 1285082 + | hypothetical protein hnr 1285174 - 1286187 + | response regulator of RpoS TERM 1570 1287090 - 1287080 - g 70 -4.6 -4.56597 | CGTTGCTGGCAAAAA CCCC TCC GGGA GCTGGTGATGAAATT galU 1286389 - 1287297 + | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 1571 1287324 - 1287345 + T 100 -12.3 -5.66684 | opp_overlap 1287301 1287324 GTGTTATCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1572 1287345 - 1287324 - T 79 -10.1 -3.76224 | opp_overlap 1287324, overlap 1287301 GTGTTATCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1573 1287397 - 1287413 + T 100 -13.7 -4.08767 | opp_overlap 1287397 CCGGACAATAAAAAA TCCCGCC GCT GGCGGGA TTTTAAGCAAGTGCA TERM 1574 1287413 - 1287397 - T 100 -13.7 -5.55769 | opp_overlap 1287397 CCGGACAATAAAAAA TCCCGCC GCT GGCGGGA TTTTAAGCAAGTGCA hns 1287854 - 1287441 - | global DNA-binding transcriptional dual regulator H-NS tdk 1288459 - 1289076 + | thymidine kinase TERM 1575 1289351 - 1289380 + T 89 -9.3 -4.59109 | overlap 1289353 GCCCCAGAAGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGAGCTGTG TERM 1576 1289353 - 1289378 + T 100 -16.3 -3.90762 | overlap 1289351 CCCAGAAGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGAGCTG S1325 1290690 - 1289362 - | IS4 orf TERM 1577 1290698 - 1290723 + r 72 -9.1 -3.61398 | opp_overlap 1290698 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 1578 1290723 - 1290698 - R 100 -9.8 -5.61596 | opp_overlap 1290698 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1579 1290820 - 1290833 + r 83 -4.5 -5.28826 | opp_overlap 1290820 AGCGCTACTGATTAA GCGGA TTTT TTCGC TTTTTTCTCAGCTTT adhE 1293491 - 1290816 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1580 1290850 - 1290860 + g 88 -8.2 -4.64763 | overlap 1290853 TTTTTCTCAGCTTTA GCCG GAG CGGC TTCTTTTTTCGCTGC TERM 1581 1290853 - 1290863 + g 77 -3.2 -5.09225 | overlap 1290850 TTCTCAGCTTTAGCC GGAG CGG CTTC TTTTTTCGCTGCAGT ychE 1293968 - 1294615 + | hypothetical protein TERM 1582 1294649 - 1294632 - T 76 -8.4 -4.05788 | opp_overlap 1294632, overlap 1294617 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA TERM 1583 1294632 - 1294649 + T 74 -8.4 -3.98113 | opp_overlap 1294617 1294632 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA S1328 1295485 - 1294982 - | IS1 orfB S1329 1295679 - 1295404 - | IS1 orfA TERM 1584 1295952 - 1295930 - H 73 -7.8 -4.08557 | GTCGCGAAAGAATAA TGTGTCTC GACAGGG GAGACACA GTACGAATCGACATA oppA 1296130 - 1297761 + | periplasmic oligopeptide binding protein TERM 1585 1297764 - 1297804 + F 82 -7 -4.87786 | gap 2, opp_overlap 1297770, overlap 1297765 1297768 1297769 TGTGAAGCACTAATG GCA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTGA TTTTTATCGCATTAC TERM 1586 1297765 - 1297803 + F 79 -10.5 -3.51948 | gap 2, opp_overlap 1297770, overlap 1297764 1297768 1297769 GTGAAGCACTAATGG CA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTG ATTTTTATCGCATTA TERM 1587 1297768 - 1297799 + F 81 -12.4 -3.22077 | gap 1, opp_overlap 1297770, overlap 1297765 1297764 1297769 AAGCACTAATGGCAA TAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTG TCTGATTTTTATCGC TERM 1588 1297769 - 1297797 + F 100 -15.3 -3.16187 | opp_overlap 1297770, overlap 1297768 1297765 1297764 AGCACTAATGGCAAT ACGTGGGGCAGGA GTG TCCTGCTCCACGG TGTCTGATTTTTATC TERM 1589 1297796 - 1297770 - f 100 -16.6 -3.10464 | opp_overlap 1297769 1297768 1297765 1297764 GCACTAATGGCAATA CGTGGGGCAGGA GTG TCCTGCTCCACG GTGTCTGATTTTTAT TERM 1590 1298256 - 1298274 + G 70 -4.4 -4.5442 | opp_overlap 1298256, overlap 1298241 1298258 TGGGGCTGGCAATGA CCGGGGTT GTT ATCCCCAG TTTTGTGGTTGCGCC TERM 1591 1298688 - 1298705 + G 74 -2.7 -4.93877 | overlap 1298678 1298671 1298695 TAAGCCTGACCATCC TGGTTGG TGCG TTAACCA TTTTGTTTAATGCCA oppB 1297847 - 1298767 + | oligopeptide transporter permease TERM 1592 1298814 - 1298802 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1298782 - 1299690 + | oligopeptide transport permease protein oppD 1299702 - 1300715 + | oligopeptide transporter ATP-binding component TERM 1593 1301568 - 1301550 - g 93 -8.8 -4.95547 | TGGAGAAGAACAAAA CCATCCAG TTA CTGGAAGG GGAATTACCGTCGCC oppF 1300712 - 1301716 + | ATP-binding protein of oligopeptide ABC transport system TERM 1594 1301751 - 1301720 - T 93 -10.2 -4.57073 | opp_overlap 1301726, overlap 1301723 1301726 GATCCGCTTTAAAAA CAATAAGGGCTGAC AGTT GTCAGCCCTTTTTC ACGCTAAAAGCGATT TERM 1595 1301748 - 1301723 - T 100 -11.9 -4.40561 | opp_overlap 1301726, overlap 1301720 1301726 CCGCTTTAAAAACAA TAAGGGCTGAC AGTT GTCAGCCCTTT TTCACGCTAAAAGCG TERM 1596 1301745 - 1301726 - T 100 -13.6 -4.31587 | opp_overlap 1301726, overlap 1301723 1301720 CTTTAAAAACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCTAAAA TERM 1597 1301726 - 1301745 + T 100 -13.6 -4.59773 | opp_overlap 1301726 1301723 1301720 CTTTAAAAACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCTAAAA S1335 1302098 - 1301769 - | dsDNA-mimic protein cls 1303593 - 1302133 - | cardiolipin synthetase TERM 1598 1302174 - 1302162 - G 78 -9.1 -3.88577 | overlap 1302160 TGAAGAAGTAAAACA GTCGC TCG GCGAC ACGTTGCCATAATGG TERM 1599 1302800 - 1302771 - G 78 -8.5 -4.2461 | opp_overlap 1302773, overlap 1302774 1302775 AGTCGCAGGAATAAA TAATCCCCATCGC GGTG GCGATGGGGCCTT CCATACGCGCCATCA TERM 1600 1302797 - 1302774 - G 95 -12.4 -4.24413 | opp_overlap 1302773, overlap 1302771 1302775 CGCAGGAATAAATAA TCCCCATCGC GGTG GCGATGGGGC CTTCCATACGCGCCA TERM 1601 1302796 - 1302775 - G 100 -15.9 -3.13925 | opp_overlap 1302773, overlap 1302774 1302771 GCAGGAATAAATAAT CCCCATCGC GGTG GCGATGGGG CCTTCCATACGCGCC TERM 1602 1303060 - 1303037 - G 74 -3 -5.00616 | overlap 1303041 GGGCTGCGGAAAAAA GCCACACTCC CGGC GGAGTCGAGC ATCAATCGGCAATGA TERM 1603 1303940 - 1303911 - R 72 -8.7 -3.79071 | gap 1, opp_overlap 1303907 1303906 1303911 1303912 1303915, overlap 1303912 1303915 TCTACAATATCTAAA TGTACTGGGCACCA TTG CGGTGCCCAATA-A GTTTACTCTTCCGTC TERM 1604 1303940 - 1303912 - R 72 -10.3 -2.86961 | opp_overlap 1303911 1303907 1303906 1303912 1303915, overlap 1303911 1303915 CTACAATATCTAAAT GTACTGGGCACCA TTG CGGTGCCCAATAA GTTTACTCTTCCGTC TERM 1605 1303937 - 1303915 - R 76 -12 -2.67958 | opp_overlap 1303912 1303911 1303907 1303906 1303915, overlap 1303911 1303912 CAATATCTAAATGTA CTGGGCACCA TTG CGGTGCCCAA TAAGTTTACTCTTCC kch 1305217 - 1303964 - | voltage-gated potassium channel TERM 1606 1305500 - 1305470 - H 76 -9.1 -3.74178 | opp_overlap 1305473, overlap 1305476 TAAGGAAAGGCCAAA CAAGAACACGGTT GCAAA AACCGTGCCCTTA AATATTGGATCTCTA TERM 1607 1305494 - 1305476 - H 79 -8.9 -4.1023 | opp_overlap 1305473, overlap 1305470 AAGGCCAAACAAGAA CACGGTT GCAAA AACCGTG CCCTTAAATATTGGA S1338 1305580 - 1305882 + | IS600 orfA S1339 1306023 - 1306709 + | IS600 orfB yciI 1307053 - 1306757 - | YciI-like protein TERM 1608 1307910 - 1307900 - g 81 -6.8 -4.62069 | GCGTGAGGTGAAAAA TGCG ATG CGCA GATGGCGTTATGAGC tonB 1307268 - 1307996 + | transport protein TonB TERM 1609 1308002 - 1308035 + T 100 -16.9 -3.14564 | opp_overlap 1308004 1308011, overlap 1308004 1308011 AATTCAGTAAGCAGA AAGTCAAAAGCCTCC GACC GGAGGCTTTTGACTA TTACTCAACAGGTAA TERM 1610 1308004 - 1308033 + T 100 -19.5 -3.13522 | opp_overlap 1308004 1308011, overlap 1308002 1308011 TTCAGTAAGCAGAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAC TATTACTCAACAGGT TERM 1611 1308033 - 1308004 - T 100 -19.5 -4.08144 | opp_overlap 1308004 1308002 1308011, overlap 1308011 TTCAGTAAGCAGAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAC TATTACTCAACAGGT TERM 1612 1308011 - 1308026 + T 90 -10.4 -4.29325 | opp_overlap 1308004 1308011, overlap 1308004 1308002 AGCAGAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGACTATTACTC TERM 1613 1308026 - 1308011 - T 93 -10.4 -4.40173 | opp_overlap 1308011 1308004 1308002, overlap 1308004 AGCAGAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGACTATTACTC yciA 1308434 - 1308036 - | acyl-CoA thioester hydrolase TERM 1614 1308487 - 1308453 - R 90 -10.8 -4.22948 | overlap 1308459 AAAACCGACTTAAAA GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC TGAGGAGAACAGAGG yciB 1309078 - 1308539 - | intracellular septation protein A TERM 1615 1308769 - 1308785 + g 72 -4.3 -4.7254 | overlap 1308742 1308770 GTTCTTTACTCAGCA TCCGCTG AAT TAGCGGC TTTTTCATCACCCAT yciC 1309851 - 1309108 - | hypothetical protein TERM 1616 1310267 - 1310285 + G 82 -3 -5.28176 | overlap 1310269 TTCTGGCAGTGCCTT TGCGCATG AAG CAGGCGAA TTTTTTATGCGTGCA yciD 1310208 - 1310846 + | outer membrane protein W TERM 1617 1310882 - 1310860 - T 100 -14.2 -4.84017 | overlap 1310837 1310861 AATTCCGCACAAAAA CGACCCCGTA ATA TACGGGGTCA ATAAGGACATGGTAT TERM 1618 1310881 - 1310861 - T 100 -15.5 -3.49687 | overlap 1310837 1310860 ATTCCGCACAAAAAC GACCCCGTA ATA TACGGGGTC AATAAGGACATGGTA yciE 1311412 - 1310906 - | hypothetical protein TERM 1619 1311244 - 1311260 + g 71 -2.2 -5.00138 | GATCAAGAATAGTTT CCAGTT GAACA ATCTGG TTTTTGGTTTCACTA yciF 1311958 - 1311458 - | putative structural protein TERM 1620 1312000 - 1311979 - R 85 -13.7 -2.94144 | opp_overlap 1311976, overlap 1311976 TCTCCAGTGAAATCA CTGCGAGCC ATAC GGCCCGCAG ATGCAATTATCTTTA yciG 1312280 - 1312044 - | hypothetical protein TERM 1621 1312596 - 1312574 - R 95 -11.2 -4.45261 | overlap 1312575 TAAAGAAAGTTAAAA TGCCGCCAGC GGA ACTGGCGGCT GTGGGATTAACTGCG TERM 1622 1312595 - 1312575 - R 90 -14.7 -3.2553 | overlap 1312574 AAAGAAAGTTAAAAT GCCGCCAGC GGA ACTGGCGGC TGTGGGATTAACTGC trpA 1313409 - 1312603 - | tryptophan synthase subunit alpha trpB 1314602 - 1313409 - | tryptophan synthase subunit beta trpC 1315975 - 1314614 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1623 1314705 - 1314717 + g 86 -10.5 -3.89614 | opp_overlap 1314704 1314703 1314700 GAATTAAAATCAAGT CCGGC GCA GCCGG TTTGTGCCGCTTCCA trpD 1317571 - 1315976 - | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 1624 1316895 - 1316919 + g 74 -6.4 -4.46854 | gap 1, overlap 1316896 TTCAGCTCGCCACGC ACCACC-GCTG AAAA CAGCTGGTGGC TTTCTTGTTGGCTAA TERM 1625 1316896 - 1316918 + g 70 -9.9 -3.27389 | gap 1, overlap 1316895 TCAGCTCGCCACGCA CCACC-GCTG AAAA CAGCTGGTGG CTTTCTTGTTGGCTA trpE 1319133 - 1317571 - | anthranilate synthase component I TERM 1626 1319108 - 1319118 + g 82 -3.2 -5.20783 | TCGCAGGTTAGCAGT TCGA GAG TCGG TTTTTGTGTTTGCAT TERM 1627 1319181 - 1319163 - R 100 -8.8 -5.75342 | TTTGTTCAAAAAAAA GCCCGC TCATTAG GCGGGC TGGGTATCTGATTGC trpL 1319269 - 1319225 - | trp operon leader peptide yciV 1319407 - 1320288 + | putative enzyme TERM 1628 1320439 - 1320428 - gf 79 -3.6 -5.1167 | AATTGAAGATAAAAA CGCC ATGG AGCG TATTTGTCGTATTCG yciO 1320249 - 1320905 + | hypothetical protein TERM 1629 1320956 - 1320939 - f 76 -8.4 -4.07885 | opp_overlap 1320939 1320935 TACGCGGCCTTAAAA TGGCGC TATACG GCGCCA TTGATTCTCCTGTTC TERM 1630 1320939 - 1320956 + F 72 -9.1 -3.49851 | opp_overlap 1320939, overlap 1320935 TACGCGGCCTTAAAA TGGCGCT ATAC GGCGCCA TTGATTCTCCTGTTC yciL 1321006 - 1321878 + | 23S rRNA pseudouridylate synthase B TERM 1631 1321887 - 1321907 + T 84 -8.3 -4.62872 | opp_overlap 1321887 1321884 CGGTTAATCAAAGTA TGCCGGA CGTCATA TCCGGCA TTTTTACAGATTAAT btuR 1322508 - 1321918 - | cob(I)yrinic acid a,c-diamide adenosyltransferase yciK 1323263 - 1322505 - | short chain dehydrogenase TERM 1632 1323603 - 1323591 - g 82 -9.1 -4.2528 | GCTCAACGTAATAAA CGCCA GCG TGGCG AGTTACGGGTCAACA sohB 1323483 - 1324532 + | putative periplasmic protease TERM 1633 1324560 - 1324541 - T 95 -11.4 -4.46775 | opp_overlap 1324541 GATGTAAAAGACAAA CGCGAGGC TAAG ACCTCGCG TTTTGCTTTAATCAA TERM 1634 1324541 - 1324560 + T 93 -10.7 -4.58773 | opp_overlap 1324541 GATGTAAAAGACAAA CGCGAGG CTAAGA CCTCGCG TTTTGCTTTAATCAA yciN 1324819 - 1324568 - | hypothetical protein TERM 1635 1325347 - 1325336 - g 70 -4.4 -4.58395 | CTCAGCTGCCAAAAA GAGT GCCG ACTC TACCTCCACCAAGAC TERM 1636 1326003 - 1325988 - g 74 -6 -4.56775 | AGTCTGCTGGAAAAA GCGCGC TACA GCGTGC TGGAACGTGAAGACA TERM 1637 1326120 - 1326109 - g 90 -4.4 -5.40072 | TTGGCGTGAAAAAAA CCAT GATG ATGG CGCAGCGTTTGTATG topA 1325199 - 1327796 + | DNA topoisomerase I TERM 1638 1327820 - 1327852 + F 74 -10.8 -3.29121 | gap 1, opp_overlap 1327828, overlap 1327828 TCTGTCAGGTTTTTA TAAACAAAGGGTCGC GAAA GCGGCCCTTT-TTTA TTGCATATTATTTTT TERM 1639 1327845 - 1327828 - f 81 -8.3 -4.55295 | opp_overlap 1327820 1327828 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT TERM 1640 1327828 - 1327845 + F 100 -10.5 -5.49234 | opp_overlap 1327828, overlap 1327820 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT cysB 1328006 - 1328980 + | transcriptional regulator CysB TERM 1641 1328994 - 1329027 + F 73 -9.7 -3.35613 | overlap 1328991 AATTTCTTGCGTTAT TTTCGGCACCTTT TATGTAGC GAAGGTGCCGGAA TATATTCTCTTTTGT TERM 1642 1329826 - 1329841 + F 93 -11.8 -3.66643 | CTCACTGATCCTTGA CCCCGC TGCG GCGGGG TTGTCATTTGCTTTG TERM 1643 1330346 - 1330385 + G 75 -7.3 -4.32034 | gap 2, overlap 1330345 TTAACCCGCTCTCAC CGGTCGACCTGGTCATTGA CCAC TCGGTGACC-G-TCGATCG TTTTGGTGATGATGA TERM 1644 1332276 - 1332266 - g 72 -8.2 -3.82433 | opp_overlap 1332265, overlap 1332256 ATAAGCAGGAGCAAA CGCC GCT GGCG GTGATTGCCGGGAAA acnA 1329982 - 1332657 + | aconitate hydratase TERM 1645 1332698 - 1332664 - T 78 -11.6 -2.98947 | opp_overlap 1332664, overlap 1332661 TTGAAGTAACAAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TGAATTACACGATGC TERM 1646 1332664 - 1332698 + T 76 -11.6 -2.52896 | opp_overlap 1332664 1332661 TTGAAGTAACAAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TGAATTACACGATGC ribA 1333311 - 1332721 - | GTP cyclohydrolase II pgpB 1333481 - 1334245 + | phosphatidylglycerophosphatase B yciS 1334394 - 1334702 + | hypothetical protein TERM 1647 1335516 - 1335502 - g 70 -7.1 -4.08945 | AGCAGTTGGGTAAAA CTGCC GAATG GGCAG AATTCCTGCAACGCG yciM 1334709 - 1335878 + | hypothetical protein pyrF 1336071 - 1336808 + | orotidine 5'-phosphate decarboxylase yciH 1336805 - 1337134 + | translation initiation factor Sui1 TERM 1648 1337162 - 1337143 - T 100 -13.6 -5.0916 | opp_overlap 1337143 1337136 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC TERM 1649 1337143 - 1337162 + T 100 -13.6 -3.71687 | opp_overlap 1337143, overlap 1337136 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC osmB 1337478 - 1337260 - | lipoprotein S1371 1338496 - 1337747 - | putative DEOR-type transcriptional regulator TERM 1650 1341105 - 1341081 - R 100 -13.6 -4.42062 | GAGCGGGGAAATAAA CGGCCCATCC ATGAG GAATGGGCCG TGAAAGGAGATTACG rnb 1343050 - 1341116 - | exoribonuclease II TERM 1651 1341301 - 1341290 - G 72 -7.2 -4.15222 | opp_overlap 1341290 1341289 AGGTGCCGGAATAAA GGCG ATAG CGCC GTTATCAACCAAACG TERM 1652 1341368 - 1341379 + g 75 -7.2 -4.32857 | opp_overlap 1341363, overlap 1341363 1341355 CGCCGCGAAACGGGT GCCG GTCC CGGC TTTATCTTTCAGGAA yciW 1344245 - 1343118 - | putative oxidoreductase TERM 1653 1343754 - 1343743 - G 75 -4.4 -4.75309 | opp_overlap 1343743 TGAAAGCCAATAAAA CCAA TGAT TTGG TTAATGATCACACAG TERM 1654 1344370 - 1344350 - R 93 -12.5 -3.71149 | opp_overlap 1344350 1344348 1344351, overlap 1344351 GTATAACAGAGATAA CGGGCGGCA GAA CGCCGCCCA TCTTTACCAACAGAA TERM 1655 1344350 - 1344370 + r 73 -9.6 -3.34398 | opp_overlap 1344350 1344351, overlap 1344348 1344351 GTATAACAGAGATAA CGGGCGGC AGAAC GCCGCCCA TCTTTACCAACAGAA TERM 1656 1344369 - 1344351 - R 84 -13.8 -2.81966 | opp_overlap 1344351 1344350 1344348, overlap 1344350 TATAACAGAGATAAC GGGCGGCA GAA CGCCGCCC ATCTTTACCAACAGA TERM 1657 1344351 - 1344369 + r 81 -13.1 -2.60496 | opp_overlap 1344350 1344351, overlap 1344350 1344348 TATAACAGAGATAAC GGGCGGC AGAAC GCCGCCC ATCTTTACCAACAGA fabI 1345177 - 1344389 - | enoyl-(acyl carrier protein) reductase TERM 1658 1345525 - 1345566 + r 100 -15.1 -3.20723 | gap 1 AACAGCTATTCGGCT CGGTCGG-CCCCCTCGCCCT TTC AGGGTGAGGGTGACCGGCGG TTCAGTTCCTGCAGA ycjD 1345898 - 1345545 - | hypothetical protein TERM 1659 1345894 - 1345940 + g 100 -19.8 -2.62184 | GATTTTATTTTATCC ATCACCTCATTCTGACAAGA TTTAATC TCTTGTCAGAATGAGGTGAA TAATCTGGAAGGAGG sapF 1346772 - 1345966 - | putative ATP-binding protein of peptide transport system TERM 1660 1346715 - 1346732 + g 77 -6.9 -4.45664 | opp_overlap 1346711 1346710 1346714 1346715 GACGACGAAACCAAC CGGTCCG GTAG CGGAACG TTTTACTTAAATTAC sapD 1347766 - 1346774 - | putative ATP-binding protein of peptide transport system sapC 1348656 - 1347766 - | peptide transport permease protein TERM 1661 1348372 - 1348351 - G 86 -10.9 -3.96892 | gap 1 AAGCGTCACCACAAA TGCGCC-ACC CAC GGTTGGCGCA GCTCCGCTCAGTAAA TERM 1662 1348594 - 1348627 + g 91 -10.9 -4.26188 | gap 1, opp_overlap 1348593 GTCACTATAAAATTT GCGCCAGGC-GGTACG CAG CGTGCCCGGCGGGCGC TTTTCGCTGTATACG sapB 1349608 - 1348643 - | peptide transport permease protein sapA 1351248 - 1349605 - | peptide transport periplasmic protein TERM 1663 1350244 - 1350229 - G 70 -3.9 -4.64861 | overlap 1350231 GCGCGGTAAAATAAA GGCCG CCGTTT CAGCC GTACCATAATAGATG TERM 1664 1351156 - 1351145 - G 81 -7.2 -4.68545 | overlap 1351138 ACGCAATAGACAAAA CCGC TGTC GCGG ATATCAGCATGCGGG TERM 1665 1351352 - 1351384 + r 100 -15.7 -3.16039 | opp_overlap 1351361, overlap 1351339 GGCCGTGTGGTTGGT CGTTGAACAGGTGGC GTC GCCATCTGTTCAACA TTCGTACCCGTGATT TERM 1666 1351930 - 1351889 - R 100 -16 -3.12351 | gap 1, opp_overlap 1351882, overlap 1351920 TCTTTTTATAGTTAA TGGCGCGGCGCGTTACCCT CAGGC AGGATAATGCGCCGCG-CA TCCGGCTATTACGTT ycjJ 1353324 - 1351939 - | putative amino acid/amine transport protein TERM 1667 1352125 - 1352144 + g 71 -2.9 -4.81082 | gap 1, opp_overlap 1352125 1352126, overlap 1352125 1352126 CGGCATCAGCAAATA G-TGGAAG TGATC CTTCCAGC TTTTATTCATTCCTT S1384 1355045 - 1353627 - | putative glutamine synthetase TERM 1668 1354253 - 1354263 + g 70 -5.4 -4.4009 | CCATAAAAGTGGCGT GCAT CTT ATGC TTTTCTGCCATCAGA puuD 1355245 - 1356021 + | gamma-glutamyl-gamma-aminobutyrate hydrolase ycjC 1356048 - 1356605 + | DNA-binding transcriptional repressor PuuR TERM 1669 1356690 - 1356676 - f 81 -8.5 -4.55295 | GTCGCCAGAAATAAA CGGGC ATGCA GCCCG GGGATCTCTGCGCCC TERM 1670 1356918 - 1356906 - g 74 -7.7 -4.07885 | CACCGCTGGCGAAAA TTGCC CGC GGCAA GAGCGTCGATATCGA TERM 1671 1357623 - 1357610 - g 77 -5.9 -4.59773 | opp_overlap 1357613 CCGGATCTGCAAAAA GCGGC AAGC GCCAC CGCCGCAGGCATCTT aldH 1356755 - 1358242 + | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase TERM 1672 1358705 - 1358694 - g 70 -5.8 -4.1822 | overlap 1358696 CGCTACGGCAATAAA CAGC TGGA GCTG CTGGACGTCAACGCT TERM 1673 1359228 - 1359211 - g 71 -2.7 -4.84363 | CGAAACTACTAAAAA CCTTC CCTCAGTT GAAGG GCGTGAAAATTGATT TERM 1674 1359447 - 1359469 + G 70 -11.2 -2.72511 | overlap 1359446 CATTACCCGTTCCCC GGCGGGCGCA CGC TGCGCGTGCC ATTTACCGCGATGGG ordL 1358244 - 1359524 + | oxidoreductase TERM 1675 1360419 - 1360437 + G 75 -11.6 -3.05816 | CGCGAATATTATGGA CGCGCCCG CGC CGGGCGGG TTGGGTGGCACCTAC goaG 1359562 - 1360827 + | PLP-dependent GABA aminotransferase pspF 1361924 - 1360947 - | phage shock protein operon transcriptional activator TERM 1676 1361046 - 1361060 + g 93 -8.6 -4.77438 | opp_overlap 1361045 1361048 CCCCTGTTGCAAACT GAGTTG CAG CAACTC TTTTTCCTGCTGCAT TERM 1677 1362674 - 1362664 - g 82 -3.2 -5.27335 | opp_overlap 1362667 TTCGGTAAACAAAAA TCGC TGG ACGA TCAGTTTGCCGAACT pspA 1362091 - 1362759 + | phage shock protein PspA pspB 1362813 - 1363037 + | phage shock protein B pspC 1363037 - 1363396 + | DNA-binding transcriptional activator PspC pspD 1363405 - 1363626 + | peripheral inner membrane phage-shock protein pspE 1363669 - 1364016 + | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 1678 1364033 - 1364048 + F 100 -11.8 -6.02914 | AGAATTCACCATGAG CGGCGC TTAT GCGCCG TTTTTTTTCTGTCAC S1397 1365387 - 1365662 + | IS1 orfA S1398 1365581 - 1366084 + | IS1 orfB TERM 1679 1367736 - 1367720 - f 73 -7.9 -4.15044 | CTGCCGGTGAATAAA GCGGTTG TCA CTACCGC CACCTGGAAAGACAA ycjO 1368001 - 1368882 + | putative binding-protein dependent transport protein ycjP 1368869 - 1369711 + | putative transport system permease protein TERM 1680 1369883 - 1369855 - g 76 -11 -3.40597 | opp_overlap 1369877, overlap 1369827 1369853 CGGCGCACCGAAACA CGGAACGGAAGT GGTCG ACTTCCGCGCCG CCAGCCCGTTTATCG ycjQ 1369742 - 1370794 + | putative oxidoreductase TERM 1681 1371707 - 1371729 + G 100 -15.6 -3.53012 | opp_overlap 1371698 CAACGATCTGGAACT GGTGGCTGTC TGT GACAGCCGCC TTTCCCAGGCGCAGG ycjS 1371597 - 1372652 + | putative dehydrogenase ycjT 1372649 - 1374916 + | hypothetical protein ycjU 1374913 - 1375572 + | putative beta-phosphoglucomutase TERM 1682 1376459 - 1376435 - g 79 -12.1 -3.05963 | ATCGTGATGGGAATA CGCCCGGAAGA TAT TCATCCGGACG CGCAAGAGGAAAATA ycjV 1375586 - 1376554 + | putative ATP-binding component of a transport system TERM 1683 1376692 - 1376671 - T 73 -10.1 -3.36569 | overlap 1376669 1376673 GCAATTCGCTAAATA CAGGGGGAA GGCA TTCCCCCAG GATAATACAAGGAAC TERM 1684 1376690 - 1376673 - T 77 -11.3 -3.24976 | overlap 1376671 1376669 AATTCGCTAAATACA GGGGGAA GGCA TTCCCCC AGGATAATACAAGGA TERM 1685 1377705 - 1377664 - T 95 -12.3 -3.92373 | TATCCGATCTATAAA TGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCATTCA GGCAAGGTAGCTGGT ycjW 1378721 - 1377723 - | putative LACI-type transcriptional regulator TERM 1686 1378498 - 1378488 - G 79 -4.6 -4.98522 | AACTTCAGAGAAAAA CGGA TTA CCCG CCGTAGTTTTGGTCG ycjX 1378877 - 1380274 + | putative enzyme ycjF 1380271 - 1381332 + | hypothetical protein tyrR 1381480 - 1383021 + | DNA-binding transcriptional regulator TyrR TERM 1687 1383070 - 1383016 - T 72 -8.9 -3.63862 | gap 2, opp_overlap 1383018 1383024 1383029, overlap 1383022 1383031 CAGAAGAAGAACGAA GAGTAAGCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATT-A-ACTTATGC TTTCAGTACAGCCAG TERM 1688 1383018 - 1383070 + T 86 -12.1 -3.64703 | opp_overlap 1383016 1383022 1383031, overlap 1383024 1383029 GAAGAAGAACGAAGA GTAAGCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTTATGC TTTCAGTACAGCCAG TERM 1689 1383066 - 1383022 - T 90 -13.7 -3.4382 | opp_overlap 1383018 1383024 1383029, overlap 1383016 1383031 AAGAACGAAGAGTAA GCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTT ATGCTTTCAGTACAG TERM 1690 1383024 - 1383064 + T 100 -18.5 -3.61609 | opp_overlap 1383022 1383016 1383031, overlap 1383018 1383029 GAACGAAGAGTAAGC GCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAC TTATGCTTTCAGTAC TERM 1691 1383029 - 1383059 + T 100 -21.4 -3.27601 | opp_overlap 1383022 1383016 1383031, overlap 1383024 1383018 AAGAGTAAGCGCGAA TATGCCTGATGGTG CAA CACCATCAGGCATA TTAACTTATGCTTTC TERM 1692 1383057 - 1383031 - T 100 -19.6 -3.06737 | opp_overlap 1383029 1383024 1383018, overlap 1383022 1383016 GAGTAAGCGCGAATA TGCCTGATGGTG CAA CACCATCAGGCA TATTAACTTATGCTT tpx 1383571 - 1383065 - | thiol peroxidase ycjG 1383690 - 1384655 + | putative muconate cycloisomerase I ycjI 1385358 - 1384630 - | murein peptide amidase A TERM 1693 1385339 - 1385324 - G 73 -11.8 -2.71712 | overlap 1385323 GTTCCGGGCGGAAAT GCGCCG CGTT CGGCGC GTGAGCGGGTTACGG TERM 1694 1385409 - 1385422 + r 72 -5.3 -4.63932 | TTGTGCAAATTTTGC GGATT ATCA AATCC TTTTCTTCAACGCTA TERM 1695 1385605 - 1385629 + r 73 -11.5 -2.74865 | opp_overlap 1385605, overlap 1385602 AATAAGTTTAATAAA TCGTACTGCAC ATA GTACAGTACGA TGGTATCTATATAAT TERM 1696 1385629 - 1385605 - R 100 -13.7 -4.22591 | opp_overlap 1385605 1385602 AATAAGTTTAATAAA TCGTACTGCAC ATA GTACAGTACGA TGGTATCTATATAAT S1416 1386287 - 1385649 - | hypothetical protein TERM 1697 1386592 - 1386618 + H 70 -5 -4.4891 | ACAACATTTTTGTCG CACCTCCCGG TTGTTGC CCGCGTGGTG TTTTATAGTAGTCAG TERM 1698 1387278 - 1387253 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 1387261, overlap 1387254 1387268 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT S1418 1387115 - 1388200 + | ISSfl4 orf ycjZ 1389744 - 1390226 + | putative LYSR-type transcriptional regulator S1422 1390936 - 1390223 - | IS600 orfB S1423 1391379 - 1391077 - | IS600 orfA TERM 1699 1392486 - 1392472 - g 86 -7.1 -4.95876 | AATCAGAACGAAAAA GGGGA GATTG TCCCC GGCGTCGCGACTCAA TERM 1700 1393252 - 1393242 - g 70 -6.8 -4.09685 | opp_overlap 1393241 1393242 GGGGACGGGCGAAAA GCCA GCG TGGC ATTTTATACCAGATG S1424 1392226 - 1393860 + | putative transport periplasmic protein TERM 1701 1393872 - 1393899 + T 83 -14.2 -2.74525 | overlap 1393867 1393869 TTGATGTGATGGGAA CTGGCGTTACCC TTGT GGATAACGCCAG TGATGTCTGATTTAG S1425 1394942 - 1393911 - | hypothetical protein TERM 1702 1394039 - 1394018 - G 70 -5.1 -4.43877 | overlap 1394019 TAATCTTCAAATAAA CGTCTTGCT GTGC AGCAAGCCA CTCAGCCCATACCGT S1426 1395070 - 1395372 + | IS911 orfA S1427 1396190 - 1395618 - | IS91 orf S1428 1396804 - 1396190 - | IS91 orf TERM 1703 1396717 - 1396738 + g 70 -7.2 -4.06419 | opp_overlap 1396714 CTGATTCAATTACCA CCGGACGG ACTGCC CCTTCCGG TTGTTTCTCCAGCCA S1429 1397169 - 1396804 - | IS91 orf TERM 1704 1397048 - 1397062 + g 74 -10 -3.44284 | opp_overlap 1397047 1397048, overlap 1397047 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA TERM 1705 1397658 - 1397647 - g 77 -5.8 -4.63218 | opp_overlap 1397652 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG S1431 1397440 - 1397841 + | IS911 orfB TERM 1706 1398542 - 1398521 - T 100 -10.1 -5.30155 | opp_overlap 1398523, overlap 1398523 GCAGTAAGTAAAAAA TAGGCCCGA TAAC TCGGGCCTT GTCAGTTATTGAAGA TERM 1707 1398540 - 1398523 - T 95 -12.7 -4.27681 | opp_overlap 1398523, overlap 1398521 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA TERM 1708 1398523 - 1398540 + T 88 -12.7 -3.47751 | opp_overlap 1398523 1398521 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA ydaA 1399512 - 1398562 - | universal stress protein UspE TERM 1709 1399642 - 1399594 - R 79 -12 -3.23638 | TGAAACAGTGATGAA CCTTCTGCCAGATCAATAAATC AGAAA AATTTAATGATATGACAGAAGG ATAGTGAGTTATGCG fnr 1400416 - 1399664 - | fumarate/nitrate reduction transcriptional regulator ogt 1401126 - 1400611 - | O-6-alkylguanine-DNA:cysteine-protein methyltransferase TERM 1710 1401541 - 1401513 - R 100 -10.3 -5.9003 | AAATGAATAAAAAAA TAGAGCCTGTCGA CAT CCGCCAGACTCTA CAGTACACACAGCAG S1430 1402056 - 1401670 - | hypothetical protein S1439 1402582 - 1403229 + | putative secretion protein S1440 1403659 - 1403393 - | IS1294 transposase TERM 1711 1403709 - 1403721 + r 76 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT S1441 1404591 - 1403767 - | IS1294 transposase TERM 1712 1403804 - 1403818 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 1713 1404339 - 1404349 + g 79 -4.6 -5.00616 | overlap 1404334 1404333 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC TERM 1714 1405181 - 1405171 - g 77 -6.8 -4.53303 | opp_overlap 1405170 1405171 GATTCCGATAGAAAA TGCC ACT GGCA ATTTCACCAAAATTG S1443 1404902 - 1405297 + | putative secretion protein TERM 1715 1405444 - 1405427 - f 73 -7.7 -4.01603 | opp_overlap 1405431 CAGGTAAAGACGAAA TGGCCTG GCTT CAGACCA GCTATTTAATTGCTG TERM 1716 1407106 - 1407131 + F 77 -10.4 -3.34227 | opp_overlap 1407101 GCGTAACCAACGTGC GCCGCAGCGT ATCGAC ACGCTGCAGC TTGATAATTTCCTCA TERM 1717 1408050 - 1408089 + F 71 -3.4 -4.75372 | gap 1, overlap 1408074 GTAATCCGGTCATCG CGTCATGGTGAGCAGCATG TTC CA-GCTGCTCCTCCAGCCG TTTTTGCTCAGTAAT TERM 1718 1408449 - 1408420 - f 79 -2.9 -5.28176 | gap 1, opp_overlap 1408420, overlap 1408421 1408422 GTTAGTCAGAAAAAA GCGCGCATAAAAAC CTT GTTTTT-TGCGCTG ATAATTTGCCGAGCG zntB 1409073 - 1410056 + | zinc transporter TERM 1719 1410109 - 1410092 - f 72 -2.7 -4.96848 | gap 1 GTCTGTATACAAAAA CGCCGCAA AGT TTG-AGCG AAGTCAATAAACTCT TERM 1720 1410246 - 1410265 + F 100 -10 -5.85178 | ATTGATTCGTACGAC GCCGACTT TGAT GAGTCGGC TTTTTTTTGCCTGTT TERM 1721 1411643 - 1411617 - g 70 -4.4 -4.52857 | opp_overlap 1411618, overlap 1411618 1411622 ATGTTGCAGATAAAA CTTAACTGGCAA ACG CCGCCAGCTAAT AGTTCCATTGTGACG dbpA 1410534 - 1411901 + | ATP-dependent RNA helicase DbpA TERM 1722 1412019 - 1411996 - T 87 -14.6 -2.80074 | opp_overlap 1411993 1411985, overlap 1411993 1411991 GCCTCCATAAGAGTA GCCCGATACG CTTG CGCATCGGGC GCTATCCTGGTTATT ydaO 1412965 - 1412030 - | C32 tRNA thiolase TERM 1723 1412710 - 1412722 + g 84 -10.5 -3.71672 | CGGGCAGAACGTGTT CCGGG AAG CCCGG TTGCTTTTGATCGAG TERM 1724 1412895 - 1412905 + g 74 -2.4 -5.0809 | GCTTCGCCCACGTTA CGAC GCA GACG TTTTTGTAATTTGTT TERM 1725 1413133 - 1413114 - R 100 -10.7 -4.95957 | opp_overlap 1413113 1413114 GAAATGAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA TERM 1726 1413114 - 1413133 + r 70 -10.7 -2.55351 | opp_overlap 1413114, overlap 1413113 GAAATGAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA ynaF 1413647 - 1413141 - | putative filament protein TERM 1727 1413707 - 1413689 - R 100 -10.2 -5.03945 | GAATAAGCAGAAAAA GCCCGCCA TAA CAGCGGGC AGGAGGATTTAGAAC TERM 1728 1415179 - 1415150 - R 87 -7.1 -5.10064 | opp_overlap 1415155, overlap 1415152 1415155 TCCAACATATAAAAA GACAAGCCCGAAC AGTC GTCCGGGCTTTTT TTTTAGAATTGGATA TERM 1729 1415177 - 1415152 - R 83 -9.7 -4.16832 | opp_overlap 1415155, overlap 1415150 1415155 CAACATATAAAAAGA CAAGCCCGAAC AGTC GTCCGGGCTTT TTTTTTAGAATTGGA TERM 1730 1415155 - 1415174 + r 100 -9.2 -6.10489 | opp_overlap 1415155 1415152 1415150 CATATAAAAAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTTAGAATT TERM 1731 1415174 - 1415155 - R 89 -11.4 -4.16226 | opp_overlap 1415155, overlap 1415152 1415150 CATATAAAAAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTTAGAATT ydbK 1418736 - 1415212 - | putative oxidoreductase, Fe-S subunit TERM 1732 1417056 - 1417043 - G 77 -3.1 -5.1287 | overlap 1417044 GTCAGATGGAAAAAA GCCAT CTGC ATGAC GGTATTAATACGGGC TERM 1733 1417086 - 1417105 + g 70 -10 -3.16564 | gap 1 CCGCCAGGCCACATT CGCGGGCGA TTT TCGCC-GCG TTAATCACATAGAAG TERM 1734 1417740 - 1417752 + g 70 -6.9 -4.13903 | GATAGAGCGGTTCTG CCTGG GCA CCGGG TTCTTTGGTTCTGTC TERM 1735 1418424 - 1418388 - G 72 -5.2 -4.55887 | overlap 1418389 CGCCAAAAATAGAAA GTGCATGT-GTGGCAACG GTA CGT-GCCGCTACATGCAG GACAAATGGCGTCAG TERM 1736 1418929 - 1418914 - R 83 -4.6 -5.27769 | opp_overlap 1418919 ATAAAAAAGTAAAAA TGCGGG GCAA CGCGCA GGACAGCTCTCGACG S1453 1419912 - 1419409 - | IS1 orfB S1454 1420106 - 1419831 - | IS1 orfA TERM 1737 1420430 - 1420378 - R 83 -10.8 -3.67296 | opp_overlap 1420378 1420379 1420391, overlap 1420391 GAGTATCGACGTAAA TTCCGCTAACTAATTGGCGTTGCA TGTAC TGCAACGCCAATTAGTTAAAACAG ATATTTGACTATGCA TERM 1738 1420379 - 1420431 + r 73 -9.5 -3.4404 | gap 2, opp_overlap 1420378 1420391, overlap 1420378 1420391 AGTATCGACGTAAAT TCCG--CTAACTAATTGGCGTTGCA TGTAC TGCAACGCCAATTAGTTAAAACAGA TATTTGACTATGCAT TERM 1739 1420417 - 1420391 - R 100 -15.3 -3.34192 | opp_overlap 1420391 1420379 1420378, overlap 1420378 AATTCCGCTAACTAA TTGGCGTTGCA TGTAC TGCAACGCCAA TTAGTTAAAACAGAT TERM 1740 1420391 - 1420417 + r 100 -15.3 -3.33815 | opp_overlap 1420378 1420391, overlap 1420379 1420378 AATTCCGCTAACTAA TTGGCGTTGCA TGTAC TGCAACGCCAA TTAGTTAAAACAGAT ydbL 1420887 - 1420558 - | hypothetical protein ynbE 1421077 - 1420892 - | hypothetical protein ydbH 1423713 - 1421074 - | hypothetical protein TERM 1741 1422714 - 1422739 + g 80 -11.9 -3.39862 | CCTGTTTCGCTTCAC CGGTCAGCTGC AGAG GCAGTTGACTG TTATCCATGCTTAAT TERM 1742 1424143 - 1424118 - g 84 -7.5 -4.66953 | opp_overlap 1424139, overlap 1424135 GGAAGAGCTGAAAAA GCACGGCGTTA AATA TATCGCCCTGC GCTGTGCCGGTTTCA ldhA 1423921 - 1424910 + | D-lactate dehydrogenase TERM 1743 1424918 - 1424940 + T 86 -14.9 -2.74012 | TGGTTTAATCTTGCA GCTCCCCTG CAATC CAGGGGAGC TGATTCAGATAATCC TERM 1744 1425215 - 1425170 - T 71 -3.3 -4.88736 | overlap 1425171 GACCAGCGATAAAAA TCCGCCAGAAATCAGCTTT GGTGAAAA AATGATGATTTCCGGCAGC ATGTGTAACCGCTTT S1461 1425850 - 1425347 - | IS1 orfB S1462 1426044 - 1425769 - | IS1 orfA TERM 1745 1426540 - 1426524 - H 78 -5.9 -4.87665 | TGCGAGTGACAAAAA TGACACT GAA AATGTCA AAAAAGCGCTGATGA TERM 1746 1427575 - 1427565 - g 72 -5.4 -4.58283 | TAATCTGGCGAAAAA TCAG TAT CTGA GCACGTCGATGAAAC ydbD 1426639 - 1428273 + | hypothetical protein TERM 1747 1428617 - 1428627 + G 71 -2.4 -4.89852 | CCTCTTTTTGCTATT GCCC ATC GTGC TTTTTATCCGTATGG S1464 1428444 - 1429049 + | hypothetical protein TERM 1748 1429273 - 1429292 + G 70 -3.6 -4.68506 | opp_overlap 1429273 GCATTGAAAGAATAT TGTACG CTTATATC CGTACA TTTTTCGCGTTGGTT TERM 1749 1429899 - 1429911 + G 100 -3.3 -6.17669 | TGACTCATTAATTTT CACCG CTC CGGTA TTTTTTTATTTTATT S1465 1429201 - 1429944 + | putative phosphatidate cytidiltransferase S1466 1429960 - 1431717 + | hypothetical protein S1468 1433132 - 1432419 - | IS600 orfB S1469 1433575 - 1433273 - | IS600 orfA acpD 1434943 - 1434338 - | azoreductase TERM 1750 1435139 - 1435113 - H 75 -3.1 -5.10933 | gap 1, overlap 1435120 TCATTTAAAAGAAAA TTAATCAGGCAG ACTA CTGCCC-ACTAA CGTTATGACAGAACA TERM 1751 1436797 - 1436776 - g 71 -2.9 -4.7373 | overlap 1436778 GCATCGGACGAAAAA CATCGTCGC TTCC ACGACAAAG AATCCGACTTCCTCG TERM 1752 1437881 - 1437924 + G 72 -5.2 -4.57073 | opp_overlap 1437881 1437880 1437913 AATCGTTGCCGAAAC CGGTACGCCGTAATTTTGTG CCTG CACCAAACTACGCCGAAGCG TTTTTAGGCCGCGTC hrpA 1435201 - 1439046 + | ATP-dependent RNA helicase HrpA S1473 1439960 - 1439247 - | IS600 orfB TERM 1753 1441038 - 1441002 - H 82 -8 -4.62069 | overlap 1441003 TCGTTACGTTAAAAA TTGCCCGTTTGTGAAC CACTT GTTTGCAAACGGGCAT GACTCCTGACTTTTA TERM 1754 1441037 - 1441003 - H 79 -11.5 -3.3692 | overlap 1441002 CGTTACGTTAAAAAT TGCCCGTTTGTGAAC CACTT GTTTGCAAACGGGCA TGACTCCTGACTTTT aldA 1441195 - 1442634 + | aldehyde dehydrogenase A TERM 1755 1442669 - 1442644 - f 83 -10.4 -3.71527 | overlap 1442646 TCTTAATGAGTGAAA GAGGCGGAGG TTTTTT CCTCCGCCTG TGCGCGTCAGAGTTT TERM 1756 1442667 - 1442646 - f 86 -13 -3.43853 | overlap 1442644 TTAATGAGTGAAAGA GGCGGAGG TTTTTT CCTCCGCC TGTGCGCGTCAGAGT cybB 1443865 - 1444395 + | cytochrome b561 TERM 1757 1444445 - 1444413 - f 78 -4.9 -4.92385 | overlap 1444427 1444431 GATATTTAAAGAAAA CGCCTGTACTA AAACCGACCCG TGGTACAGGCG AAGAATACGGGTCTA TERM 1758 1444669 - 1444684 + G 70 -5.4 -4.38712 | ACTTATTTTGTTTAT GGGAAC GCTT GTTTCC TTTTATGCCGATGCC ydcA 1444640 - 1444813 + | hypothetical protein TERM 1759 1445153 - 1445185 + T 93 -10.7 -4.55128 | opp_overlap 1445153 AACACGAGGCATATA GGTCTGATTCCGA TATTCAT TTGGAGTCAGACC TTTTAATTTCAGGCT S1482 1445986 - 1445135 - | IS103 orf S1483 1446504 - 1445983 - | IS103 orf TERM 1760 1446332 - 1446348 + g 76 -3.7 -4.92363 | GCACTAACGCCTTTA GGTTTGG GAA TTAAACC TTTTTCTCCATGTTT TERM 1761 1447610 - 1447598 - g 95 -9.1 -5.10497 | AACGGATTGAAAAAA TCGCC AGT GGCGA TCTGACGATGAATGA trg 1446880 - 1448520 + | methyl-accepting chemotaxis protein III, ribose sensor receptor S1486 1449622 - 1448558 - | putative LYSR-type transcriptional regulator TERM 1762 1450056 - 1450073 + G 75 -5.5 -4.7078 | ATGATGCTTCTCTGG CGCGTAA TCCC TTCCGCG TTTTTACATCCTTAC S1487 1449698 - 1451041 + | hypothetical protein TERM 1763 1451732 - 1451744 + GT 74 -6.9 -4.21827 | opp_overlap 1451720 1451719, overlap 1451733 AAGGGCAAAGCGATC TCGGC TTT GCCGG TTTTCGCGTGTTTAA S1489 1453045 - 1452842 - | hypothetical protein mdoD 1451266 - 1452921 + | glucan biosynthesis protein D TERM 1764 1452934 - 1452957 + gF 90 -14.6 -2.90075 | TAATCGTTTTTTCTT CGGCACCTTC TTCG GGAGGTGCCG TCTGGTTAAACACGA TERM 1765 1453266 - 1453254 - g 74 -7.7 -4.13282 | ATGAGATGCTCAAAA TCCTG CAG CAGGA GAGCGTCAAAGAGGT ydcH 1453118 - 1453285 + | hypothetical protein TERM 1766 1453296 - 1453312 + F 100 -10.8 -5.00616 | TGTAAACTTTCCTAA GCCGCC AGCCA GGCGGC TTTTTTAACAACAGC TERM 1767 1453757 - 1453793 + G 74 -6.5 -4.5442 | opp_overlap 1453747 1453761 1453769, overlap 1453758 1453761 TCAAATGTCGGGTGG ACAATCCGCAAAGCAAC CAG GTCGCTTTGCGCAATGG TTTTATCCTTGAAGG TERM 1768 1453758 - 1453792 + G 72 -10 -3.3217 | opp_overlap 1453747 1453761 1453769, overlap 1453757 1453761 CAAATGTCGGGTGGA CAATCCGCAAAGCAAC CAG GTCGCTTTGCGCAATG GTTTTATCCTTGAAG TERM 1769 1453789 - 1453761 - g 83 -12.5 -3.28791 | opp_overlap 1453761 1453758 1453757, overlap 1453769 ATGTCGGGTGGACAA TCCGCAAAGCAAC CAG GTCGCTTTGCGCA ATGGTTTTATCCTTG rimL 1453348 - 1453884 + | ribosomal-protein-L7/L12-serine acetyltransferase S1492 1454859 - 1453879 - | hypothetical protein TERM 1770 1454310 - 1454298 - G 77 -3.3 -5.0925 | opp_overlap 1454298 TGGCAAAATCAAAAA CTTCG GCG CGATG TTCAATAAAAGCATA TERM 1771 1455465 - 1455483 + G 72 -5.3 -4.56597 | gap 1, overlap 1455462 TGGTGCGTTGGGCTA CACC-GAC GCCG GTCTGGTG TTTTTAGGCGCAGGC tehA 1454983 - 1455975 + | potassium-tellurite ethidium and proflavin transporter TERM 1772 1456511 - 1456482 - g 73 -9.2 -3.58428 | GTGAAATACAATGAA GACGTCGGCGAG CTGCAC CGCACCGACGCC AACGGTAATCGTATT tehB 1455972 - 1456565 + | tellurite resistance protein TehB TERM 1773 1456998 - 1457009 + G 70 -5.8 -4.28774 | opp_overlap 1456998 AAACAACCTCAGCAA CAGG TAAA CCTG TTTTACGTTGGGTAG TERM 1774 1457120 - 1457096 - g 78 -8.6 -4.2558 | opp_overlap 1457096 TATCCGGTACCAAAA CCTTCTACCC AGGTA GGGCAGAAAG TTCTGGATAAAATTT S1495 1456868 - 1457524 + | hypothetical protein TERM 1775 1457533 - 1457552 + T 100 -13.6 -4.85599 | AAAGTAGTTCCAGAC GCGCCATC GTTA GATGGCGC TTTTTATCCGGTGCG TERM 1776 1457595 - 1457576 - T 71 -7 -4.07568 | opp_overlap 1457564 1457563 CGGTGCGCCGTAAAA CCCCATCC TTCA GGGCGGGG ATATAAGGCGCGGTT TERM 1777 1458010 - 1458020 + T 76 -4.6 -5.04249 | ACAATGCCTTCCACG CCGG ATA TCGG TTTCTTTTTTCACAG TERM 1778 1458343 - 1458331 - T 71 -3.4 -4.82901 | GCGGGCTTACAAAAA CTTC TTCCG GAAG CGGGCTGCTTTTCCC TERM 1779 1458401 - 1458370 - T 78 -6.6 -4.65895 | gap 1, overlap 1458372 TCCCCGATTCAAAAA GCG-GTGACAGAATG ATG CATTCCGCTACCCGC AGGGCGTTAAGCTCG TERM 1780 1458689 - 1458676 - T 71 -3.8 -4.83615 | overlap 1458682 1458684 CAGTTTTCAGAAAAA CCAG AAGACG CTGG CGAGACTTCAGCGAC S1497 1460324 - 1459137 - | IS91 orf TERM 1781 1460611 - 1460600 - g 85 -3 -5.40072 | TCTTCGTCAAAAAAA TCAT CCGG ATGA AGTTTCACAACATAG S1498 1460353 - 1460679 + | IS91 orf TERM 1782 1461016 - 1460984 - f 87 -10.6 -4.08919 | AAATCGTAAAGGAAA CCGTAGCACGTCGT ATGCA AGAACGTGCCACGG CTGGCTGATGGATGT S1499 1461247 - 1461522 + | IS1 orfA S1500 1461441 - 1461944 + | IS1 orfB S1502 1462735 - 1463037 + | IS600 orfA S1503 1463178 - 1463891 + | IS600 orfB S1504 1464423 - 1464148 - | hypothetical protein TERM 1783 1464416 - 1464432 + g 70 -5 -4.44608 | opp_overlap 1464416, overlap 1464413 AACCAGGACAAATAA CCCGCC ATGCC GACGGG TTCTTTTTGGATCAG TERM 1784 1464432 - 1464416 - G 74 -7.9 -4.12857 | opp_overlap 1464413 1464416 AACCAGGACAAATAA CCCGCCA TGC CGACGGG TTCTTTTTGGATCAG S1505 1464680 - 1464444 - | hypothetical protein TERM 1785 1464666 - 1464655 - G 70 -7.2 -4.13767 | TCGTCGATTTCAAAA GCGC CTAT GCGC ACACTGGTTTTCATC TERM 1786 1465592 - 1465602 + r 70 -2.4 -5.02074 | TTTCCTGATTGCTTT CGGG TGA CCAG TTTTTTAGCGCATCG TERM 1787 1466310 - 1466283 - R 79 -11.2 -3.41602 | opp_overlap 1466277, overlap 1466284 CGCAGTTTAGCATAA GCGCTCCGGCGC AGGC ACGCCGGAGCAG TGGGCATTATTTGGG TERM 1788 1466309 - 1466284 - R 86 -14.7 -2.64747 | opp_overlap 1466277, overlap 1466283 GCAGTTTAGCATAAG CGCTCCGGCGC AGGC ACGCCGGAGCA GTGGGCATTATTTGG TERM 1789 1466361 - 1466382 + r 74 -8.1 -3.85389 | gap 1, overlap 1466365 GCCACTCTTTCGGTT CACTTTCCTG CAA CAGGAA-GTG TTTGCCTTCTTGGGC S1508 1470189 - 1468906 - | hypothetical protein TERM 1790 1469104 - 1469086 - G 77 -8.8 -4.08111 | overlap 1469088 TAAAGATATGACAAA CAGGTCGA GTA TCGACCAG CGTCCAATCCAGGTC TERM 1791 1469102 - 1469088 - G 77 -10 -3.61777 | overlap 1469086 AAGATATGACAAACA GGTCGA GTA TCGACC AGCGTCCAATCCAGG TERM 1792 1469837 - 1469827 - G 74 -3.2 -4.94222 | AATAACGCAGAAAAA GACC ATT GATC CCGTTATCGCATCGC TERM 1793 1469950 - 1469928 - G 70 -9.8 -3.14125 | overlap 1469926 GCCAGATATGCAACA GCGGTTCGCC CCA GGCAAACGGC ATAAGCAACAGCATG TERM 1794 1470001 - 1470017 + g 70 -3.6 -4.65895 | overlap 1470002 GCGCGTTAGCGACCA GTCGCG CCCGT CGCGAA TTTTTGCCTGACAGC TERM 1795 1470247 - 1470271 + H 72 -6.6 -4.26903 | opp_overlap 1470258 TGATGGGAATGATCT TGAGCATTAA CGCAT TTAATGCTTA TTTTAATAGGCTGGC S1509 1470319 - 1470816 + | hypothetical protein TERM 1796 1471321 - 1471309 - f 71 -6.9 -4.06419 | overlap 1471312 GCTGGTGAGAAAGAA GACGC ACC GCGCC GCGAACGCAAGCCAC yebJ 1471492 - 1471611 + | hypothetical protein TERM 1797 1471983 - 1471998 + G 77 -8.2 -4.14392 | opp_overlap 1471982 1471981, overlap 1471984 ACGATCTCTACAATC TGGCGC AAAA GCGCCG TTTTGAACGTTACCA TERM 1798 1472056 - 1472038 - g 74 -8.1 -4.13767 | GTCGGTACTGGAAAA GCCGATG GATTT CACCGGC AACGACACTTATAAC prc 1471631 - 1473679 + | carboxy-terminal protease TERM 1799 1473709 - 1473686 - f 90 -14 -3.42147 | opp_overlap 1473686 GTCAAGTAATATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1800 1473686 - 1473709 + F 100 -14 -5.00616 | opp_overlap 1473686 GTCAAGTAATATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1801 1473831 - 1473841 + F 80 -6.8 -4.65916 | opp_overlap 1473817, overlap 1473807 1473806 1473819 ATACGATGTGGGTAT CGCA TAT TGCG TTTTGTTAAACTGAG htpX 1473874 - 1474752 + | heat shock protein HtpX TERM 1802 1474798 - 1474767 - T 76 -11.7 -2.74026 | opp_overlap 1474773, overlap 1474773 ATATGAAGTAAATAC TAAAAAGCGCGTC CTGATC GACGCGCTTTTTT TATGCCCTGGCTCGT TERM 1803 1474792 - 1474773 - T 100 -10.7 -4.946 | opp_overlap 1474773, overlap 1474767 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG TERM 1804 1474773 - 1474792 + T 100 -10.7 -5.626 | opp_overlap 1474767 1474773 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG S1513 1476282 - 1474798 - | putative transport protein S1514 1476348 - 1477139 + | putative regulator TERM 1805 1477149 - 1477179 + F 77 -6.9 -4.44046 | opp_overlap 1477149 1477152 TTCTGATGAGAGTAA GAACCTGTCGG AATATCAAA CAGACAGGTTC TTTATTTAGCATGAG S1515 1477680 - 1477823 + | hypothetical protein S1516 1477898 - 1478185 + | hypothetical protein TERM 1806 1478199 - 1478230 + F 71 -9.6 -3.25729 | gap 1, opp_overlap 1478207 AATCCTTCCTCAATC TTGAGTAACCCCGTC GTT GAAGG-GTTACTCAA TTCATCCTGATTATA S1517 1478855 - 1478998 + | hypothetical protein cspC 1479011 - 1479220 + | cold shock-like protein CspC TERM 1807 1479197 - 1479213 + F 70 -9.5 -2.94747 | opp_overlap 1479188 CAGAAAGGTCCGGCA GCTGTTA ACG TAACAGC TATCTGATCGAATCC TERM 1808 1479287 - 1479269 - f 71 -7.4 -3.86822 | opp_overlap 1479269 CAATCTCGCTATAAA GCCTCG TCGAATG CGAGGC TTTTTACTATGCTTT TERM 1809 1479269 - 1479287 + F 88 -8.1 -4.85177 | opp_overlap 1479269 CAATCTCGCTATAAA GCCTCGT CGAAT GCGAGGC TTTTTACTATGCTTT rrmA 1479386 - 1480195 + | 23S rRNA methyltransferase A S1520 1480812 - 1480192 - | hypothetical protein TERM 1810 1480448 - 1480464 + g 73 -11.5 -2.55437 | opp_overlap 1480448, overlap 1480447 1480445 ACCAGTAGCCAGAAA CCGTGCC GAC GGCGCGG CTCTTCATCTTCATC TERM 1811 1480464 - 1480448 - G 78 -9.3 -3.93963 | opp_overlap 1480448 1480447 1480445 ACCAGTAGCCAGAAA CCGTGCC GAC GGCGCGG CTCTTCATCTTCATC TERM 1812 1481177 - 1481126 - R 73 -9.8 -3.42364 | gap 1, opp_overlap 1481124 1481128, overlap 1481124 AGGGAAGAGATAATA TAGCCTAAGCTATGTCTGAT-TATT AAA AATACACTAAACATAGCTTTGGCTA AATTCATAAGTTATT S1521 1481724 - 1481221 - | IS1 orfB S1522 1481918 - 1481643 - | IS1 orfA S1523 1482423 - 1481947 - | hypothetical protein TERM 1813 1482443 - 1482462 + r 71 -10.6 -2.62396 | opp_overlap 1482444 CCTCCAGATAAAAAA ACGGGGCC AAAA GGCCCCGG TAGTGTACGACAGTC TERM 1814 1482461 - 1482444 - R 100 -14.1 -5.71712 | opp_overlap 1482443 CTCCAGATAAAAAAA CGGGGCC AAAA GGCCCCG GTAGTGTACGACAGT manZ 1483338 - 1482478 - | mannose-specific PTS system protein IID TERM 1815 1483279 - 1483293 + g 82 -2.8 -5.28778 | opp_overlap 1483280, overlap 1483280 GAATACGCCACGAAT ATCACT TTG AGTGAG TTTTTTCTCGGTGGT manY 1484142 - 1483342 - | PTS enzyme IIC manX 1485176 - 1484205 - | PTS enzyme IIAB TERM 1816 1484743 - 1484768 + g 100 -12.5 -4.58685 | GGAGCCGCTTTTGGT GCTGCGGCAGC GGGT GCTGGCGCGGC TTTTTCAACCGGTTT TERM 1817 1485421 - 1485444 + H 72 -8.2 -3.67588 | opp_overlap 1485425 AAGGTAAATCTTTGC CAAATCAGAG GCGT CTCTGATATG TTTAACTCCCGTTTA TERM 1818 1486803 - 1486814 + G 72 -5.8 -4.35483 | overlap 1486780 GGCGTGCTGCGTCGC GCTC GCGG GAGC TTTGTTATCGTGACC yoaE 1485639 - 1487189 + | putative transport protein TERM 1819 1487234 - 1487202 - T 71 -9.9 -3.18199 | opp_overlap 1487210 1487230, overlap 1487191 1487190 TAAGCGTTAACGTAA CGACATAATGGGCGT GAT ATGTCCATTATGCCG GGCGGGCGGCGGTTG S1528 1488791 - 1487193 - | hypothetical protein TERM 1820 1487230 - 1487264 + g 100 -14.9 -3.54424 | opp_overlap 1487202 GTGATATGTCCATTA TGCCGGGCGGGCGGC GGTTG GCTGCCCGCCAGCCA TTTGGGAAAATCACG TERM 1821 1488912 - 1488886 - R 95 -13 -3.88583 | overlap 1488887 GAAAGCGGGTATAAA TTCGCCCATCCG TTG CAGATGGGCGAG TAAGAAGTATTAGTC TERM 1822 1488911 - 1488887 - R 100 -16.5 -2.92668 | overlap 1488886 AAAGCGGGTATAAAT TCGCCCATCCG TTG CAGATGGGCGA GTAAGAAGTATTAGT sdaA 1490286 - 1488922 - | L-serine deaminase yeaB 1491048 - 1490470 - | hypothetical protein pabB 1492413 - 1491052 - | para-aminobenzoate synthase component I TERM 1823 1491343 - 1491332 - G 72 -5.8 -4.3129 | opp_overlap 1491332, overlap 1491333 GAGCCACCAGGAAAA GCTG CGCG CAGC AGATCGCTGGCGTGT TERM 1824 1491648 - 1491637 - G 70 -3.6 -4.63952 | ATCACAAAGAATAAA CCGC TCTG GCGA AAGGCTTAAAATTGC TERM 1825 1491699 - 1491686 - G 83 -5.2 -5.1615 | TCAAGACGTAAAAAA GCGC TAAATG GCGC GCGGTTGGCCTGATT TERM 1826 1492307 - 1492279 - G 72 -8.1 -3.98159 | overlap 1492280 GACCACAATATCAAA GCGGCTATACGGA TGA TCGGCATAGCCGG AGTGTAAAAGCATCG TERM 1827 1492306 - 1492280 - G 75 -11.6 -2.98173 | overlap 1492279 ACCACAATATCAAAG CGGCTATACGGA TGA TCGGCATAGCCG GAGTGTAAAAGCATC S1532 1492487 - 1492666 + | hypothetical protein TERM 1828 1492756 - 1492726 - T 100 -11.3 -4.84359 | TGATTGTGAGAAAAA GGACGCTTTTTAT ATGTG ATTAAAAGCGTCC TGACCCATTTATGCT S1533 1493145 - 1492786 - | hypothetical protein TERM 1829 1493435 - 1493461 + r 71 -9.5 -3.25668 | overlap 1493434 GTAATATCTTATTCT CTGGTCGATTT ATGTA AAACCGACCAG TATTATCGATAAATT S1534 1493899 - 1493507 - | hypothetical protein TERM 1830 1494804 - 1494824 + G 72 -6.1 -4.3467 | AAAGTGCGCTGATCG TCTTGCCCA GAG TGCGCAGGA TTTTCGTCTGCAACT TERM 1831 1495371 - 1495382 + G 72 -4.4 -4.64846 | opp_overlap 1495371 GATCATCGAAGCTAA CAAC GGTC GTTG TTTTATGCTTTGTAC S1535 1493983 - 1495893 + | putative enzyme yeaZ 1495951 - 1496646 + | hypothetical protein S1537 1496686 - 1497267 + | putative outer membrane protein TERM 1832 1497321 - 1497283 - f 100 -24.9 -3.53012 | opp_overlap 1497286 1497294, overlap 1497286 1497294 TTGCTTGTTTTTAAA GAATGCAGAAACAGCGG CTGGT CCGCTGTTTCTGCATTC TTACGGTAAAGATAA TERM 1833 1497318 - 1497286 - f 100 -20.8 -3.90744 | opp_overlap 1497286 1497294, overlap 1497283 1497294 CTTGTTTTTAAAGAA TGCAGAAACAGCGG CTGGT CCGCTGTTTCTGCA TTCTTACGGTAAAGA TERM 1834 1497286 - 1497318 + F 100 -20.8 -3.65046 | opp_overlap 1497286 1497283 1497294, overlap 1497294 CTTGTTTTTAAAGAA TGCAGAAACAGCGG CTGGT CCGCTGTTTCTGCA TTCTTACGGTAAAGA TERM 1835 1497310 - 1497294 - f 79 -9.4 -4.0386 | opp_overlap 1497286 1497294, overlap 1497286 1497283 TAAAGAATGCAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCTTAC TERM 1836 1497294 - 1497310 + F 79 -9.4 -4.02253 | opp_overlap 1497294 1497286 1497283, overlap 1497286 TAAAGAATGCAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCTTAC TERM 1837 1498428 - 1498440 + G 72 -7.7 -3.91144 | opp_overlap 1498427 1498424, overlap 1498431 1498432 TGAACAATAAAGAGT TCCAG CAG CTGGA TTTCTCCAGTCTGCA TERM 1838 1499005 - 1499016 + G 70 -4.4 -4.57569 | opp_overlap 1499005 ATCGCTTACCGAAGA GTCA CTGG TGAC TTTTTGCCGCCGTCA fadD 1497407 - 1499158 + | long-chain-fatty-acid--CoA ligase TERM 1839 1499179 - 1499195 + F 100 -10.8 -5.75342 | opp_overlap 1499170, overlap 1499168 AAGTCAGTCGTCAGA CGCCGG TTAAT CCGGCG TTTTTTTTGACGCCC rnd 1499240 - 1500355 + | ribonuclease D TERM 1840 1500408 - 1500358 - T 95 -12.5 -4.26344 | opp_overlap 1500367 ATATCCGCAGTAAAA TCTTCCGAAGCCGGACTGGGCGC GCTCA GCGCCACATCCGGCTTTGGCAAA CTACAAATCCAACAC TERM 1841 1500367 - 1500399 + T 86 -12.1 -3.54424 | opp_overlap 1500358 GTAAAATCTTCCGAA GCCGGACTG-GGCGC GCTCA GCGCCACA-TCCGGC TTTGGCAAACTACAA yeaX 1501374 - 1500409 - | putative diogenase beta subunit TERM 1842 1501130 - 1501120 - G 88 -8.2 -4.65895 | opp_overlap 1501127 1501127 CTGCTGATGCAAAAA GCGG GAA CCGC CGCGCGAGTTTTCTT TERM 1843 1501409 - 1501394 - R 73 -4.6 -4.7373 | opp_overlap 1501399 1501400, overlap 1501397 1501398 GTACTCCATCAAAAA TCAGCC CAGC GGCGGA AAATACCGCCGCCGA S1542 1502955 - 1502389 - | putative repressor protein TERM 1844 1502961 - 1502971 + H 75 -3.2 -5.1517 | overlap 1502948 1502955 CCGGGGGCATAAAAA TGCG CTC TGCA TTTTTGCTTTCTTTT S1543 1503322 - 1503624 + | IS600 orfA S1544 1503765 - 1504478 + | IS600 orfB TERM 1845 1505145 - 1505175 + T 78 -4.8 -5.03314 | gap 1, opp_overlap 1505151, overlap 1505146 1505147 1505151 TTAACGCTTAAATTG CA-CAAAGGCTGC ACACAG GCAGCCTTTGCTA TTTTTTAGAGGTGAC TERM 1846 1505146 - 1505173 + T 83 -9.9 -4.14633 | opp_overlap 1505151, overlap 1505145 1505147 1505151 TAACGCTTAAATTGC ACAAAGGCTGC ACACAG GCAGCCTTTGC TATTTTTTAGAGGTG TERM 1847 1505147 - 1505172 + T 82 -13.4 -3.08056 | opp_overlap 1505151, overlap 1505146 1505145 1505151 AACGCTTAAATTGCA CAAAGGCTGC ACACAG GCAGCCTTTG CTATTTTTTAGAGGT TERM 1848 1505168 - 1505151 - T 74 -8.4 -3.95219 | opp_overlap 1505147 1505146 1505145 1505151 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG TERM 1849 1505151 - 1505168 + T 76 -8.4 -4.18668 | opp_overlap 1505151, overlap 1505147 1505146 1505145 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG yeaP 1506425 - 1505400 - | hypothetical protein yoaF 1506608 - 1506862 + | hypothetical protein yeaO 1507252 - 1506884 - | hypothetical protein TERM 1850 1506911 - 1506935 + g 86 -6.5 -5.1675 | gap 1 TAGCCAGTCGGCCAG CACCAGCGCA TGGTTC TGCG-TGGTG TTTTTTGCTGCGTAG yeaN 1508466 - 1507405 - | putative amino acid/amine transport protein TERM 1851 1508374 - 1508362 - G 74 -10.5 -3.1876 | AATCGTATCCAGTAA CGGCG CTG CGCCG GTAAAGGTGACGCGT yeaL 1509783 - 1509337 - | hypothetical protein S1551 1509905 - 1510057 + | hypothetical protein yeaK 1510561 - 1510058 - | hypothetical protein TERM 1852 1511339 - 1511322 - H 70 -9.9 -3.06492 | opp_overlap 1511302 CGATCGATGCCAATA CTTCCTG ACTG CAGGAAG GACCAGTTATTCATC S1554 1512189 - 1512902 + | IS600 orfB yeaG 1514306 - 1512927 - | hypothetical protein TERM 1853 1513343 - 1513356 + g 72 -4.5 -4.72127 | CGATGTAAACACGGT CGAGG AAGG CTTCG TTGTTTTTGTTATTA yeaF 1514742 - 1515488 + | hypothetical protein TERM 1854 1515540 - 1515524 - f 100 -13.7 -4.82901 | opp_overlap 1515524 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG TERM 1855 1515524 - 1515540 + F 100 -13.7 -4.2803 | opp_overlap 1515524 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG S1557 1515578 - 1516339 + | putative aldehyde reductase yeaD 1517274 - 1516390 - | hypothetical protein TERM 1856 1517331 - 1517314 - R 100 -11.3 -5.82316 | opp_overlap 1517314 ATCAGGTAAAAAAAA GAGCGAC CGAA GTCGCTC TTTTTAGATCACAGT TERM 1857 1517314 - 1517331 + r 95 -11.3 -4.66163 | opp_overlap 1517314 ATCAGGTAAAAAAAA GAGCGAC CGAA GTCGCTC TTTTTAGATCACAGT gapA 1518353 - 1517358 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1858 1518425 - 1518409 - H 72 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT yeaA 1518695 - 1519108 + | methionine sulfoxide reductase B S1561 1519150 - 1519422 + | hypothetical protein TERM 1859 1519911 - 1519894 - g 77 -8.3 -4.08485 | GTGACTGAAATTAAA GCCGCGG CAAT CTGCGGC GCAGACATGAAGCAC S1562 1519792 - 1520868 + | putative oxidoreductase TERM 1860 1520923 - 1520913 - g 71 -2.4 -4.90002 | GAACAGATAACAAAA CCGC ATT GTGG TGCACGGCTGGATCG TERM 1861 1521588 - 1521576 - g 78 -9.1 -3.9093 | CGGAGTATAGAAGAA GGCGT CAT ACGCC AGACGGGTAAACCTT S1563 1520895 - 1522274 + | putative transport protein S1565 1523357 - 1524193 + | putative aldolase S1566 1524198 - 1525145 + | putative kinase TERM 1862 1525391 - 1525377 - g 86 -4.2 -5.41143 | CAGGCGTTAAAAAAA CTGCCC CGT GAACAG GTTGTAGTAGAAACC TERM 1863 1525506 - 1525478 - g 78 -5.2 -4.84359 | GCAGTTGTATAAAAA CCTTTCCCCGGA ATCTA TCCGCGAAGAGG TAGAAGCCAGCTTGC TERM 1864 1525563 - 1525580 + G 74 -3.3 -5.0133 | ATCTATATGACGCAC TGGCAGT CGGT GCCGCCA TTTTTTACGCCGATA TERM 1865 1525931 - 1525941 + G 70 -6.8 -4.03093 | opp_overlap 1525931 TGATATGCTTGAACA GTGG CAG CCAC TTTGTGCTCGTTATC S1567 1525200 - 1526135 + | hypothetical protein S1568 1526272 - 1527030 + | putative DEOR-type transcriptional regulator TERM 1866 1527113 - 1527092 - f 79 -10.2 -3.60538 | opp_overlap 1527091 1527092, overlap 1527090 AAATGATGATAAAGA TGCGGCAA GTGAAT TTGCCGCA ATTGCTACCTTTTAT TERM 1867 1527092 - 1527113 + F 73 -10.9 -2.56591 | opp_overlap 1527092 1527090, overlap 1527091 AAATGATGATAAAGA TGCGGCAAG TGAA TTTGCCGCA ATTGCTACCTTTTAT TERM 1868 1527637 - 1527659 + G 100 -4.8 -5.63103 | CCCATGCTGTCTGCG GCGATAGGCG TGG TGGTTATCGC TTTTTTTAGTTGGCG ydjE 1527148 - 1528506 + | putative transport protein ydjB 1529240 - 1528599 - | nicotinamidase/pyrazinamidase ansA 1530267 - 1529251 - | cytoplasmic asparaginase I TERM 1869 1529488 - 1529514 + g 73 -3.7 -4.77173 | overlap 1529490 AATACCGCGATCGCT GGCTTCTTGTA ATTCC TGCAGGAAGGC TTTGTTTTGTGGCGC TERM 1870 1530424 - 1530395 - R 100 -9.4 -5.08824 | gap 1, overlap 1530398 1530399 CGTCGAGGTAAAAAA TAATGTGGCCGAC GATCT GTCGGCCAC-TCA GTACAAGACTTAACG TERM 1871 1530422 - 1530398 - R 95 -11.4 -4.64763 | overlap 1530395 1530399 CGAGGTAAAAAATAA TGTGGCCGAC GATCT GTCGGCCACT CAGTACAAGACTTAA TERM 1872 1530421 - 1530399 - R 93 -14.9 -3.37773 | overlap 1530398 1530395 GAGGTAAAAAATAAT GTGGCCGAC GATCT GTCGGCCAC TCAGTACAAGACTTA sppA 1532290 - 1530434 - | protease 4 TERM 1873 1532280 - 1532261 - G 77 -2.8 -5.08824 | overlap 1532263 CGTCCATTTAAAAAA TCCGGCAA TAAA TCGCCAAA GGGTTCGCATGTATT ydjA 1532451 - 1533002 + | hypothetical protein selD 1533119 - 1534162 + | selenophosphate synthetase TERM 1874 1534590 - 1534541 - g 77 -8.5 -4.13945 | gap 1, opp_overlap 1534547 1534586, overlap 1534542 ACTGGCACCGGAAAA GCGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCGG TTGAGCGGGCGATCG TERM 1875 1534589 - 1534542 - g 75 -12 -3.08046 | gap 1, opp_overlap 1534547 1534586, overlap 1534541 CTGGCACCGGAAAAG CGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCG GTTGAGCGGGCGATC TERM 1876 1535310 - 1535297 - g 74 -3.1 -4.91109 | gap 1 TTGGGATGACAAAAA GGT-CG ATG CGCACC ACGCCATCATCCCGA topB 1534167 - 1536128 + | DNA topoisomerase III TERM 1877 1536169 - 1536199 + F 86 -4.8 -5.47821 | AGTCATATTCTGAAA TATCCAGCGGAT CAAGAAA GTTCGTTGGATA TTTTTTTGCATGGAT TERM 1878 1536278 - 1536264 - f 77 -3.6 -5.16237 | AATGTGATGAAAAAA GTTTTA TTG CAAAAC CATCCTGGGAGCGAG S1578 1538704 - 1539069 + | insertion sequence 2 OrfA protein S1579 1539027 - 1539932 + | insertion element IS2 transposase InsD TERM 1879 1540451 - 1540474 + G 93 -12.4 -3.87815 | overlap 1540441 CAGGCGGGCAGTCAG CGCAGCCCTG TACT CAGTGCTGCG TTTATCAGGATCAAA S1580 1540327 - 1540599 + | hypothetical protein S1581 1540972 - 1540565 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase TERM 1880 1541213 - 1541230 + G 75 -5.5 -4.63218 | CGCTGGGCTGGTATC TGGCGGC GCTA GTCGTCA TTTTGTTGAACAGGC TERM 1881 1541650 - 1541676 + G 95 -15.2 -2.75803 | GTGTGGAGTGGGTAT CTGACGCTGAAG TCG CTCCAGCGTCAG TAATTGCAATGTTAT S1582 1541059 - 1541679 + | putative cytochrome oxidase TERM 1882 1541715 - 1541730 + T 79 -4.6 -5.09895 | overlap 1541716 GCCCGGGCCGCGTTC ACCGGT TGCA ACCGGA TTTTTTGGATCGCTG TERM 1883 1542329 - 1542344 + T 71 -6.8 -4.08767 | opp_overlap 1542317 1542320 GAATGACCGTGGTGT CATGGC GAAT GCCGTG TTTTGCCAGCATCGC TERM 1884 1542561 - 1542581 + T 73 -4.5 -4.82901 | opp_overlap 1542563, overlap 1542563 CCATTGCGGATAAAC CAGCTGCTC AAA GTGCGGCAG TTTTTGTAGACGGGA S1584 1543715 - 1543062 - | putative ATP-binding component of a transport system TERM 1885 1544511 - 1544522 + H 74 -7.2 -4.22748 | CATCAGCAGCAGACT GGCG AGTG CGCC TTTCGTTTGTTGATC TERM 1886 1544699 - 1544713 + H 74 -5.6 -4.67353 | opp_overlap 1544698, overlap 1544701 ATCCAGCACAATGAC CTGCTG CAA CAGCCG TTTTTCGCTCAATAC TERM 1887 1545276 - 1545290 + H 80 -7.1 -4.59773 | TTGCAATATTTCGCG CTGCC CGTCA GGCAG TTTTTGCGGATCGAG TERM 1888 1545487 - 1545499 + H 100 -9.1 -5.14965 | opp_overlap 1545487, overlap 1545478 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1889 1545499 - 1545487 - H 72 -9.1 -3.53012 | opp_overlap 1545478 1545487 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1890 1545966 - 1545919 - H 72 -4.9 -4.65895 | gap 2, opp_overlap 1545954 GTCGGCACTGAAAAA TCTCCCCGCACCGGCAGCTGTGT GTCG ACATAGC-GCCAGTT-GGGCAGA GTCTCCGCCCAGCCC TERM 1891 1546060 - 1546091 + H 100 -13.9 -4.4017 | opp_overlap 1546063 CCAGTGGCTGTGTAA GAATCCGGAAACG CTCACT TGTTTCCGGATTC TTTTATGCACATTGG TERM 1892 1546088 - 1546063 - H 72 -9.1 -3.61398 | opp_overlap 1546060 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTCTTTTATGCACAT S1588 1546096 - 1547424 + | IS4 orf TERM 1893 1547435 - 1547406 - T 89 -9.3 -4.59109 | opp_overlap 1547403 1547400 1547407 1547408, overlap 1547408 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCTTTTAAGGTG TERM 1894 1547407 - 1547434 + T 88 -12.8 -3.54181 | opp_overlap 1547406 1547408, overlap 1547403 1547400 1547408 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCTTTTAAGGT TERM 1895 1547408 - 1547433 + T 90 -16.3 -2.71785 | opp_overlap 1547406 1547408, overlap 1547407 1547403 1547400 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCTTTTAAGG TERM 1896 1547433 - 1547408 - T 100 -16.3 -3.90762 | opp_overlap 1547408 1547407 1547403 1547400, overlap 1547406 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCTTTTAAGG TERM 1897 1547694 - 1547708 + T 70 -10 -3.06696 | TCATTTTTAATTTCC TGCCAG TCA CTGGCA TGTGTTGCCAAAGAA ynjA 1548322 - 1547774 - | hypothetical protein ydjZ 1549026 - 1548322 - | hypothetical protein TERM 1898 1548708 - 1548691 - G 88 -5.5 -5.24129 | gap 1, overlap 1548694 1548696 TCTGGCGATAAAAAA GCACAGCG CCG CGCCG-GC CATCGAACTGGTCCA TERM 1899 1548955 - 1548925 - G 86 -11.1 -3.91897 | overlap 1548945 GCTGCGATTGATAAA CTCATGGACGCCG GGAAG CAGCGCCCATGCG AGCAGCATAGCGAAC ydjY 1549883 - 1549044 - | hypothetical protein TERM 1900 1549200 - 1549210 + gr 71 -2.4 -4.92791 | GCTATCCAGACACAC CAGG CAA CCCG TTTTCTTCTCTTCTG ydjX 1550436 - 1549726 - | hypothetical protein xthA 1551409 - 1550603 - | exonuclease III TERM 1901 1551187 - 1551173 - G 73 -9.2 -3.57144 | opp_overlap 1551176 1551178 GTCGTCACCGGGAAA GCCGCG ACG CACGGC AATCGGCGTCTCTTT TERM 1902 1551551 - 1551569 + H 74 -11 -2.92792 | overlap 1551548 CGCTTTTGGTGCGCG CTGCGTCA GAA TGGCGCAG TAATTTCCAGTAAAT TERM 1903 1552585 - 1552640 + H 79 -10.3 -3.61398 | gap 1, opp_overlap 1552603 1552611, overlap 1552575 TGCACTACGGCGTGA CGC-CCGATCTGTTAACCACCGCCAA AGCGC TGGGCGGCGGTTTCCCGGTCGGTGCG TTGTTGGCAACCGAA TERM 1904 1553428 - 1553446 + G 79 -10.2 -3.85698 | opp_overlap 1553421 CGATCACACCGGCAG CAGCGAGC TGT GCACGCTG TTTCTCGACCCGGAC TERM 1905 1553783 - 1553766 - g 77 -9.8 -3.5944 | AGGTACATCCGCAAA CCGCGC CTGCCC GCGCGG TGCTGGAGAAAGAAG TERM 1906 1553972 - 1554009 + G 70 -6.1 -4.19735 | gap 1, opp_overlap 1553963 AATTATCACCATTTC CGCGTGG-TGCTGGCGCG TAC CGATCCGGCAACCGAGCG TTTGATTTTAACCGC S1596 1553075 - 1554106 + | arginine succinyltransferase TERM 1907 1554496 - 1554522 + G 100 -14.4 -3.56821 | opp_overlap 1554470 GCGGCGAGCCTGCGA CATCGCCCGCAC GGC GTGCTGGCGGTG TTTGGGCCGTATAAT astD 1554103 - 1555581 + | succinylglutamic semialdehyde dehydrogenase TERM 1908 1556016 - 1556031 + F 72 -4.7 -4.56597 | opp_overlap 1556016 GCGCCCGTCACTGAA TCGCT GTTAAA AGCGA TTTTTAAGGACGAAG TERM 1909 1556716 - 1556696 - f 71 -6.8 -4.06864 | TTGACAGAAGAAGAA CGCCGG GCGGTGAAT CCGGCG GTGATGATGAACGAT TERM 1910 1556956 - 1556943 - g 81 -4.5 -5.055 | opp_overlap 1556932, overlap 1556944 TTAACGGGTAAAAAA CCGGT TATC ACCGA GCGAGAAATCAACGG ydjS 1556904 - 1557872 + | succinylglutamate desuccinylase TERM 1911 1557914 - 1557865 - f 74 -3.5 -5.03145 | opp_overlap 1557868 1557877, overlap 1557868 1557873 1557875 1557876 TAATGCTCGAAAAAA TAAGCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGCTTT CTTATAAATTAATAC TERM 1912 1557911 - 1557868 - f 72 -5.2 -4.61482 | opp_overlap 1557868 1557877, overlap 1557865 1557873 1557875 1557876 TGCTCGAAAAAATAA GCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGC TTTCTTATAAATTAA TERM 1913 1557903 - 1557876 - f 78 -12.8 -2.53642 | opp_overlap 1557868 1557877, overlap 1557875 1557873 1557868 1557865 AAAATAAGCTAATAC TTACCCGCAGAA ATCA TTCTGCGGGTAT TAAGTTGCTTTCTTA TERM 1914 1557877 - 1557902 + F 100 -16.3 -3.2827 | opp_overlap 1557876 1557875 1557873 1557868 1557865, overlap 1557868 AAATAAGCTAATACT TACCCGCAGAA ATCA TTCTGCGGGTA TTAAGTTGCTTTCTT spy 1558202 - 1558687 + | periplasmic protein TERM 1915 1558763 - 1558709 - f 86 -12.1 -3.52779 | opp_overlap 1558711, overlap 1558711 AGCCAAAAAACTTAA GACCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGGTT TTCTTTTCTCTTCTC TERM 1916 1558761 - 1558711 - f 93 -14.7 -3.3244 | opp_overlap 1558711, overlap 1558709 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC TERM 1917 1558711 - 1558761 + F 100 -19.8 -5.26907 | opp_overlap 1558709 1558711 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTTG CAG TAATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC S1601 1558890 - 1559465 + | hypothetical protein S1602 1560312 - 1559425 - | nucleotide excision repair endonuclease TERM 1918 1559972 - 1559988 + g 70 -6.5 -4.15044 | AGGGCACAGAGCTGG CGATTGC GGC GCAACCG TTTATTAAACAGCGG TERM 1919 1560470 - 1560511 + r 84 -8.7 -4.57569 | opp_overlap 1560473 1560476 1560477, overlap 1560473 1560477 ATAGTTTTGTAGGTA GAATAAGGCGTTCACGCCG CATC CGGCGTGAACAAATTACTC TTTTTCGCACAATCC TERM 1920 1560508 - 1560473 - R 79 -11.2 -3.35679 | opp_overlap 1560470 1560473 1560477, overlap 1560476 1560477 GTTTTGTAGGTAGAA TAAGGCGTTCACGCCG CATC CGGCGTGAACAAATTA CTCTTTTTCGCACAA TERM 1921 1560505 - 1560476 - R 72 -8.5 -3.8211 | opp_overlap 1560473 1560470 1560477, overlap 1560473 1560477 TTGTAGGTAGAATAA GGCGTTCACGCCG CATC CGGCGTGAACAAA TTACTCTTTTTCGCA TERM 1922 1560504 - 1560477 - R 77 -12 -2.88945 | opp_overlap 1560473 1560470 1560477, overlap 1560476 1560473 TGTAGGTAGAATAAG GCGTTCACGCCG CATC CGGCGTGAACAA ATTACTCTTTTTCGC nadE 1561369 - 1560542 - | NAD synthetase TERM 1923 1561331 - 1561343 + g 72 -4.7 -4.69324 | overlap 1561332 ATTAATCTGCGGTTT TGCGC CCA GCGCC TTTATTATTTGTTGT osmE 1561571 - 1561909 + | DNA-binding transcriptional activator OsmE TERM 1924 1561944 - 1561959 + F 100 -7.5 -5.78622 | opp_overlap 1561944 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTTGGCCTGA TERM 1925 1561959 - 1561944 - f 71 -7.5 -3.8646 | opp_overlap 1561944 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTTGGCCTGA celA 1562208 - 1562528 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB celC 1564020 - 1564370 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 1926 1564487 - 1564475 - T 71 -3.4 -4.79352 | TTATCTATAACAAAA CTGA GAGTA TCAG CGGACTGCATCAGCA S1609 1565573 - 1565070 - | IS1 orfB S1610 1565767 - 1565492 - | IS1 orfA celF 1566102 - 1567454 + | cryptic phospho-beta-glucosidase; cryptic ydjC 1567467 - 1568225 + | hypothetical protein TERM 1927 1568230 - 1568270 + T 72 -9.2 -3.5394 | gap 2, opp_overlap 1568230 1568231, overlap 1568232 1568238 TTGATGTGTAAGTAA GGTGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCATA TTTACGCCGGAATTT TERM 1928 1568269 - 1568231 - T 71 -10.5 -2.60723 | gap 2, opp_overlap 1568230 1568232 1568238, overlap 1568230 TGATGTGTAAGTAAG GTGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCAT ATTTACGCCGGAATT TERM 1929 1568232 - 1568268 + T 90 -14 -3.34517 | gap 2, opp_overlap 1568231 1568230, overlap 1568230 1568238 GATGTGTAAGTAAGG TGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCA TATTTACGCCGGAAT TERM 1930 1568238 - 1568261 + T 82 -11.8 -3.452 | gap 1, opp_overlap 1568231 1568230, overlap 1568232 1568230 TAAGTAAGGTGGTAA GGTCAC-TCCC CAG GGGACGTGACC TTATCCATATTTACG katE 1570533 - 1568272 - | hydroperoxidase II S1614 1570716 - 1570979 + | cell division modulator S1616 1572511 - 1572008 - | IS1 orfB S1617 1572705 - 1572430 - | IS1 orfA TERM 1931 1572840 - 1572810 - R 90 -10.4 -4.33653 | CATTTAAAAAGTAAA GCAACGGCCCCTAT ACA AAACGGACCGTTGC CAGCATAAGAATTAA S1619 1574965 - 1574375 - | hypothetical protein TERM 1932 1574957 - 1574942 - G 73 -4 -4.74767 | gap 1, overlap 1574944 ACAAGCAATAGAAAA GAGAAGG TGA CCTTC-C GCCGTCATGATAAAA TERM 1933 1574956 - 1574944 - G 72 -7.7 -3.97283 | overlap 1574942 AAGCAATAGAAAAGA GAAGG TGA CCTTC CGCCGTCATGATAAA TERM 1934 1575124 - 1575097 - R 100 -19.2 -4.16301 | opp_overlap 1575097 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG TERM 1935 1575097 - 1575124 + r 95 -17 -2.70932 | opp_overlap 1575097 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG yniC 1575796 - 1575128 - | 2-deoxyglucose-6-phosphatase TERM 1936 1576128 - 1576139 + G 90 -7.2 -5.15381 | GATCGATATGATGCA GGCG AATA CGCC TTTTTTGAATCTGTT TERM 1937 1576205 - 1576225 + G 81 -6.1 -4.84359 | overlap 1576208 GTGTGAACGTTATGT TCTGGGTGA TTT TCATCCTGA TTTTTGTCGGACTGG S1621 1575943 - 1576479 + | hypothetical protein TERM 1938 1576486 - 1576502 + T 71 -10.8 -2.64099 | opp_overlap 1576486, overlap 1576485 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA TERM 1939 1576502 - 1576486 - T 93 -10.8 -4.43477 | opp_overlap 1576485 1576486 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA S1622 1577380 - 1576520 - | hypothetical protein TERM 1940 1577084 - 1577072 - G 90 -9.1 -4.48713 | CTGACCAAGAATAAA TGCGC TAT GCGCA TCCAGCGGACGAGGT S1623 1577776 - 1577486 - | hypothetical protein TERM 1941 1577847 - 1577870 + r 100 -9.6 -5.06414 | overlap 1577849 CGACAGGTTGGTGGT GATTCCCCCA ATGC TGGGGGAATG TTTTTGTTAGCGGGA TERM 1942 1577849 - 1577868 + r 95 -12.2 -4.16307 | overlap 1577847 ACAGGTTGGTGGTGA TTCCCCCA ATGC TGGGGGAA TGTTTTTGTTAGCGG pfkB 1578806 - 1577877 - | 6-phosphofructokinase 2 TERM 1943 1579049 - 1579065 + H 100 -6.5 -5.88565 | CTTAAGAAAGTTTCC GGGACCG CGA TGGTCTC TTTTTTTGTTGTACG TERM 1944 1579226 - 1579216 - g 83 -5.4 -5.03314 | opp_overlap 1579216 GCCAGCGCTAAAAAA CCTT TCG AAGG TAATCTGAACGCAGG TERM 1945 1579613 - 1579601 - g 73 -9.1 -3.67141 | opp_overlap 1579606, overlap 1579605 ACAATGCCAGTGAAA CCCAG CCG CTGGG CTATGCCTCCGGGGC S1625 1579126 - 1579851 + | hypothetical protein TERM 1946 1579858 - 1579886 + T 79 -10.9 -3.38317 | opp_overlap 1579857, overlap 1579856 1579860 AGCATGTAAAATTAT CTGCCGGACCGTG TTA TGCGGTCTGGCTG TCTTCGTTTGTCACT TERM 1947 1579860 - 1579884 + T 79 -12.1 -3.25317 | opp_overlap 1579857, overlap 1579858 1579856 CATGTAAAATTATCT GCCGGACCGTG TTA TGCGGTCTGGC TGTCTTCGTTTGTCA S1627 1581661 - 1581158 - | IS1 orfB S1628 1581855 - 1581580 - | IS1 orfA TERM 1948 1581984 - 1581994 + H 83 -4 -5.34555 | opp_overlap 1581984 GTTTCTAGTAATAAG GAAA TGA TTTC TTTTTTATAGTGTAA TERM 1949 1583542 - 1583528 - g 73 -9.2 -3.61715 | CAGCGCCTGGAAGAA GCCGCG AAA CGCGAC CACCGTAAAATCGGT TERM 1950 1583743 - 1583733 - g 71 -2.4 -5.00616 | TCCTGTGGGAAAAAA CCGG TCA CTGG GACAACTACAAAGAT TERM 1951 1584412 - 1584437 + G 72 -8.9 -3.8512 | overlap 1584414 ATTCGCTGGTTTCTT CCCGACCTGGC TTGC GCCAGTTCAGG TTGTTATCATGAATA thrS 1582814 - 1584742 + | threonyl-tRNA synthetase TERM 1952 1585146 - 1585122 - g 72 -6.4 -4.39571 | gap 1 GTGATAAAGCCAAAA TCACG-CTGCG TTTC CGCGGTCGTGA GATGGCGCACCAGCA infC 1584854 - 1585288 + | translation initiation factor IF-3 TERM 1953 1585305 - 1585334 + F 76 -9.3 -3.72593 | opp_overlap 1585301, overlap 1585327 GCCTTCAAGTAGCAC TATCTGTGGAGCC TTTG GGCTTCACAGGCA TTGTTCGCCTTTGTT rpmI 1585385 - 1585582 + | 50S ribosomal protein L35 rplT 1585635 - 1585991 + | 50S ribosomal protein L20 TERM 1954 1586003 - 1586021 + F 93 -10.3 -4.54727 | opp_overlap 1586003 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1955 1586021 - 1586003 - f 79 -10.3 -3.62418 | opp_overlap 1586003 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC pheM 1586114 - 1586158 + | phenylalanyl-tRNA synthetase (pheST) operon leader peptide TERM 1956 1586223 - 1586208 - f 79 -10.4 -3.55815 | opp_overlap 1586208 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1957 1586208 - 1586223 + F 100 -10.4 -5.71712 | opp_overlap 1586208 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1958 1586270 - 1586256 - f 82 -2.7 -5.61881 | TTTGAAAAATAAAAA GCCAG TCTAT CAGGC GTAATTGTCGCAGCC TERM 1959 1586558 - 1586546 - g 71 -2.6 -5.0133 | TATTTGGGTAAAAAA GGGC ACTTA ACCC TTCAGATGACGACCC pheS 1586441 - 1587424 + | phenylalanyl-tRNA synthetase subunit alpha pheT 1587439 - 1589826 + | phenylalanyl-tRNA synthetase subunit beta ihfA 1589831 - 1590130 + | integration host factor subunit alpha TERM 1960 1590148 - 1590162 + F 100 -12.8 -5.80951 | opp_overlap 1590148 TGATCTAACTAAAAA GGCCGC TAT GCGGCC TTTTTTCTTTTCACT TERM 1961 1590162 - 1590148 - f 100 -12.8 -4.88407 | opp_overlap 1590148 TGATCTAACTAAAAA GGCCGC TAT GCGGCC TTTTTTCTTTTCACT btuC 1590231 - 1591211 + | vtamin B12-transporter permease btuE 1591274 - 1591825 + | putative glutathione peroxidase btuD 1591825 - 1592574 + | vitamin B12-transporter ATPase nlpC 1592652 - 1593116 + | lipoprotein TERM 1962 1593129 - 1593155 + F 100 -19.6 -3.79747 | opp_overlap 1593129 TAGTATGTCGAAAAA TTGACGGCGATG ATA CATCGCCGTCAA TTTACTCCTGAATAC TERM 1963 1593155 - 1593129 - f 100 -19.6 -4.60487 | opp_overlap 1593129 TAGTATGTCGAAAAA TTGACGGCGATG ATA CATCGCCGTCAA TTTACTCCTGAATAC TERM 1964 1593834 - 1593862 + G 77 -5.9 -4.63218 | GCGGTTTTTGATGGT CTTTTCACCCGCG TAA TGCTGGAGAAAGG TTTTATTCAGCAACA S1641 1593363 - 1594076 + | hypothetical protein TERM 1965 1594130 - 1594150 + F 78 -6.1 -4.63932 | opp_overlap 1594130 1594128 CTACACTATCAAACA GATAGGATC TAT GACCCTGTC TTTTATTACCCGCTG S1642 1594140 - 1595576 + | hypothetical protein ydiE 1595771 - 1595580 - | hypothetical protein TERM 1966 1595897 - 1595874 - R 95 -13.2 -3.86822 | CAAGTTGCGCAGAAA TGCCCATCCC ATCA GGAATGGGCA CGCATTCAGAAGCGG aroH 1596949 - 1595903 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1967 1596295 - 1596308 + g 86 -6.7 -4.96848 | opp_overlap 1596295, overlap 1596285 CGCTGGTCTGATAGA TGGTC ATCT GACCA TTTTTGTCTGGCGAG TERM 1968 1597117 - 1597090 - R 95 -7.8 -5.33131 | opp_overlap 1597098 TAACAAAAAAACAAA CCAATGCACTAG TTCT CTAGTACATTCG GCGACTAAGGCCCAT ydiA 1597939 - 1597106 - | hypothetical protein TERM 1969 1599960 - 1599978 + G 78 -8 -4.36914 | opp_overlap 1599959, overlap 1599972 1599975 TCTGACTGAAGGGAT CGCGACGC TGG GTGCCGCG TTTTATCCGAAGCGC ppsA 1598272 - 1600650 + | phosphoenolpyruvate synthase TERM 1970 1600687 - 1600653 - T 82 -5.5 -5.10665 | opp_overlap 1600658, overlap 1600657 1600658 ACTGAAGAAATAAAA TAAATCCCCGGCGGC GTTCA GTCGCCGGGGTTATG TGATCCCCGAAGATG TERM 1971 1600683 - 1600657 - T 100 -10.7 -5.02645 | opp_overlap 1600658, overlap 1600653 1600658 AAGAAATAAAATAAA TCCCCGGCGGC GTTCA GTCGCCGGGGT TATGTGATCCCCGAA TERM 1972 1600682 - 1600658 - T 93 -14.2 -3.57927 | opp_overlap 1600658, overlap 1600657 1600653 AGAAATAAAATAAAT CCCCGGCGGC GTTCA GTCGCCGGGG TTATGTGATCCCCGA TERM 1973 1600658 - 1600682 + T 100 -16.4 -3.54475 | opp_overlap 1600658 1600657 1600653 AGAAATAAAATAAAT CCCCGGCGGC GTTCA GTCGCCGGGG TTATGTGATCCCCGA ydiD 1602407 - 1600707 - | short chain acyl-CoA synthetase TERM 1974 1601528 - 1601496 - G 85 -9.8 -4.16904 | overlap 1601517 AAGATCATAGACAAA CGGCGTTGCGCCTA GCATA CAGGTGCAACGCTG CTGCTCAAGCAGCGC TERM 1975 1602399 - 1602374 - G 84 -11.2 -3.81755 | gap 1, overlap 1602377 ACTCTCGAAACAGAA CATCAGGCCCG AGTTG CGGGCCTG-TG GGATGCATGATTAGC TERM 1976 1602397 - 1602377 - G 84 -14 -2.69057 | overlap 1602374 CTCGAAACAGAACAT CAGGCCCG AGTTG CGGGCCTG TGGGATGCATGATTA ydiT 1602703 - 1602410 - | hypothetical protein ydiS 1603989 - 1602700 - | hypothetical protein ydiR 1604983 - 1604045 - | electron transfer flavoprotein subunit YdiR ydiQ 1605767 - 1605003 - | putative electron transfer flavoprotein YdiQ TERM 1977 1606021 - 1606053 + H 80 -6.3 -4.90869 | opp_overlap 1606005 1606028, overlap 1606029 GCGGTTGTATAACCG CAATACACGCCGTAT TTT ATCCGGCATATATTG TTTTTGCTTGCTCAT S1652 1606086 - 1606586 + | putative ARAC-type regulatory protein S1653 1607022 - 1607315 + | IS1 S1654 1608639 - 1607878 - | transcriptional regulator YdeO S1655 1608910 - 1608707 - | hypothetical protein TERM 1978 1609144 - 1609114 - R 81 -12.8 -3.28537 | opp_overlap 1609108 ATAGTCAATGAGGAA TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA ATGAGAAGAGGCATT S1656 1611437 - 1609158 - | putative oxidoreductase TERM 1979 1611882 - 1611919 + H 71 -3.4 -4.74103 | gap 1, overlap 1611885 TACTTTGCTTTTATT TACTGTCCCCAGGGAGA CATTT TCTCCC-GTAGCCAGTA TTTTTCCATTACGCA S1658 1612576 - 1612851 + | IS1 orfA S1659 1612770 - 1613273 + | IS1 orfB S1660 1613481 - 1614194 + | IS600 orfB S1661 1614398 - 1614219 - | putative lysis protein S of prophage CP-933V TERM 1980 1614462 - 1614440 - R 100 -9.9 -5.68489 | opp_overlap 1614440 GACAACAATAAAAAA GCCACCAGT TAACT ACTGATGGC TCTGATAACTCATGC S4818 1614909 - 1614706 - | hypothetical protein TERM 1981 1614993 - 1614981 - R 83 -4.1 -5.28942 | overlap 1614982 TACCTTAAATAAAAA CCTGA TTA TCAAG CAGATATGCATGGAT TERM 1982 1615545 - 1615524 - R 100 -15.9 -4.3341 | CAAAATCAATATAAA CAGCCCCTC CGGA GAGGGGCTG GAGAGTGGCGCTATG TERM 1983 1616716 - 1616701 - R 100 -7.5 -5.7946 | opp_overlap 1616701 1616714, overlap 1616702 TTCGCAATAAAAAAA CCCGC TCAGCG GCGGG TTGTAGAAACTCTTC TERM 1984 1616712 - 1616702 - R 76 -8.2 -4.06592 | opp_overlap 1616701, overlap 1616701 TCGCAATAAAAAAAC CCGC TCA GCGG CGGGTTGTAGAAACT rus 1617991 - 1617635 - | endodeoxyribonuclease RUS (Holliday junction resolvase) TERM 1985 1619325 - 1619354 + r 77 -11.4 -3.13403 | overlap 1619323 GTAATATTTTGCGTT GCGTGCCATCGG TTTTCT CCGGTGGCACGG TGTTACTCAGCGGGA rem 1619648 - 1619400 - | hypothetical protein TERM 1986 1619785 - 1619798 + r 70 -9.5 -3.06183 | opp_overlap 1619785 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 1987 1619798 - 1619785 - R 100 -9.5 -5.77734 | opp_overlap 1619785 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG relF 1620024 - 1619869 - | prophage maintenance protein TERM 1988 1619995 - 1620010 + g 86 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA relE 1620383 - 1620096 - | hypothetical protein relB 1620622 - 1620383 - | bifunctional antitoxin/transcriptional repressor RelB b4285 1621308 - 1620682 - | IS911 orfB TERM 1989 1621090 - 1621101 + g 77 -5.8 -4.63218 | opp_overlap 1621086 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S1673 1621850 - 1621548 - | IS911 orfA S1675 1622914 - 1622201 - | IS600 orfB S1676 1623357 - 1623055 - | IS600 orfA TERM 1990 1624447 - 1624470 + H 100 -9.6 -5.16841 | TCTGTAAACCCTCAA TCCCTTCTCT TACC GGAGAGGGGA TTTTTATTCATATAA ydfI 1624527 - 1625987 + | putative oxidoreductase TERM 1991 1626016 - 1625993 - T 100 -11.8 -5.63103 | gap 1, overlap 1625997 CGTGAAGTAAAAAAA GCAATGCCGCC ATC GGCGGCATT-C ACACACTTAGTTCAT TERM 1992 1626013 - 1625997 - T 100 -13.7 -4.07651 | overlap 1625993 AAGTAAAAAAAGCAA TGCCGCC ATC GGCGGCA TTCACACACTTAGTT S1679 1626226 - 1626023 - | hypothetical protein TERM 1993 1626397 - 1626370 - R 76 -8.4 -4.08064 | opp_overlap 1626393, overlap 1626371 AAGGCGGGGGGAAAA GCCTCTCATCCC GGAT GGGATGAGAGTA AATGAATTACTCTTC TERM 1994 1626396 - 1626371 - R 78 -11.9 -3.04517 | opp_overlap 1626393, overlap 1626370 AGGCGGGGGGAAAAG CCTCTCATCCC GGAT GGGATGAGAGT AAATGAATTACTCTT ydfH 1627090 - 1626404 - | hypothetical protein TERM 1995 1627170 - 1627153 - R 84 -10.5 -3.8591 | TGTGACAAGCAATAA CCCGGCA GTTA CGCCGGG TATAAAAATTACTGA ydfG 1627925 - 1627179 - | 3-hydroxy acid dehydrogenase dcp 1628062 - 1630107 + | dipeptidyl carboxypeptidase II TERM 1996 1630156 - 1630109 - T 79 -8.5 -4.2074 | gap 2, opp_overlap 1630115 1630119, overlap 1630111 1630118 1630119 GCTTGAACATATAAA CACCACCAATGGCTGGCCTGGAG ATAT CGCCAGGCCAGCC-T-GGTTATA GCAGTAATTGCAGCA TERM 1997 1630154 - 1630111 - T 76 -8.9 -3.70043 | gap 2, opp_overlap 1630115 1630119, overlap 1630109 1630118 1630119 TTGAACATATAAACA CCACCAATGGCTGGCCTGGAG ATAT CGCCAGGCCAGCC-T-GGTTA TAGCAGTAATTGCAG TERM 1998 1630115 - 1630151 + T 86 -13 -3.32268 | gap 1, opp_overlap 1630111 1630109 1630118 1630119, overlap 1630119 ACATATAAACACCAC CAATGGCTGGCCTGGAG ATAT CGCCAGGCCAGCC-TGG TTATAGCAGTAATTG TERM 1999 1630149 - 1630118 - T 100 -15.8 -3.31691 | opp_overlap 1630115 1630119, overlap 1630111 1630109 1630119 TATAAACACCACCAA TGGCTGGCCTGGAG ATAT CGCCAGGCCAGCCT GGTTATAGCAGTAAT TERM 2000 1630119 - 1630148 + T 100 -19.3 -2.83271 | opp_overlap 1630118 1630111 1630109 1630119, overlap 1630115 ATAAACACCACCAAT GGCTGGCCTGGAG ATAT CGCCAGGCCAGCC TGGTTATAGCAGTAA TERM 2001 1630148 - 1630119 - T 100 -19.3 -2.58292 | opp_overlap 1630119 1630115, overlap 1630118 1630111 1630109 ATAAACACCACCAAT GGCTGGCCTGGAG ATAT CGCCAGGCCAGCC TGGTTATAGCAGTAA ydeJ 1630670 - 1630152 - | competence damage-inducible protein A TERM 2002 1630607 - 1630579 - G 84 -13.9 -2.55074 | opp_overlap 1630575 GTTAAGCGTAATTGA TCCGCGATAAGTC TTT GACTCAACGCGGA TGTCAGGTTTTCAAT TERM 2003 1631051 - 1631024 - g 74 -7.6 -4.07885 | overlap 1631027 CAGGGCGGTTTAAAA CAGGATGCAGCG CCAC CGCCGCCTCATG CAATAGAAGATGGCT ydeI 1630946 - 1631179 + | hypothetical protein S1685 1631236 - 1631538 + | IS600 S1686 1631679 - 1632392 + | IS600 TERM 2004 1632540 - 1632557 + T 100 -10.5 -5.42259 | CCATGCAAGCATTCA CCGCCGG TTTA CTGGCGG TTTTTTTCGCCGTCA TERM 2005 1632615 - 1632579 - T 100 -10.2 -4.82901 | gap 1, opp_overlap 1632580, overlap 1632580 1632582 TCGCCGTCATAAAAA TCAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGGT TAGGTGAGGGATTAT TERM 2006 1632614 - 1632580 - T 93 -13.7 -3.49419 | gap 1, opp_overlap 1632580, overlap 1632579 1632582 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 2007 1632580 - 1632614 + T 85 -13.7 -3.06133 | gap 1, opp_overlap 1632579 1632580 1632582 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 2008 1632612 - 1632582 - T 93 -14.9 -3.31915 | gap 1, opp_overlap 1632580, overlap 1632580 1632579 CCGTCATAAAAATCA GGCCCCTTG-TACA CAAC TGTAACAAGGGGCC GGTTAGGTGAGGGAT TERM 2009 1632886 - 1632870 - T 72 -5.7 -4.40298 | overlap 1632871 ACTTAAATCAACAAA GCGCGGG CTG CCCCCAC GGTCTTGCACGAATC ydeF 1633980 - 1632862 - | putative transport protein TERM 2010 1633974 - 1633984 + g 72 -5.4 -4.48902 | opp_overlap 1633966, overlap 1633966 1633971 TCATAAATGGCAGCG TAGC CAT GCTA TTTCTTTACATCTCT TERM 2011 1634366 - 1634387 + G 86 -3.6 -5.4505 | overlap 1634368 CGGTTTGCGCTTTAT GCTGGTCG CTTTTC CGGCCATC TTTTTTGTTGCACGA TERM 2012 1634512 - 1634534 + G 84 -4 -5.23316 | overlap 1634505 CTGCTGGACTGGCTT CGCTGGTGTT ACA GGCACAGGCG TTTTTTACTATCGTG TERM 2013 1634546 - 1634558 + G 70 -6.9 -4.05788 | GGCGTTTTTTACTAT CGTGC TTG GCGCG TTTACTTTCGGGGAG TERM 2014 1634602 - 1634613 + G 77 -5.8 -4.63527 | opp_overlap 1634593 AACAATTGGCGGGGA TCGC CTTA GCGA TTTTTGGCGTACTGG ydeD 1634244 - 1635143 + | O-acetylserine/cysteine export protein TERM 2015 1635164 - 1635147 - T 93 -12.7 -3.73068 | GTGGGAAGTTAATAA GCCCCGA GATG TCGGGGC CAGAACAAACTACAT marB 1635392 - 1635174 - | hypothetical protein TERM 2016 1635288 - 1635255 - G 77 -8.9 -4.08485 | gap 1, overlap 1635256 GTGATTTAAATCAAA CGGTGGTTGTTCCTGC GAT GGGGGAACAACCAC-G ACATTGGCACAAGAA marA 1635807 - 1635424 - | DNA-binding transcriptional activator MarA TERM 2017 1635469 - 1635457 - G 72 -4.7 -4.68424 | TAATGGATGTAAAAA GCGCG ATT CGCCC TGCATATTGGTCATC marR 1636261 - 1635827 - | DNA-binding transcriptional repressor MarR ydeB 1636473 - 1637138 + | multiple drug resistance protein MarC TERM 2018 1637143 - 1637156 + T 79 -9.5 -3.6707 | opp_overlap 1637143 CGTACCATTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT TERM 2019 1637156 - 1637143 - T 100 -9.5 -5.1861 | opp_overlap 1637143 CGTACCATTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT ydeA 1638353 - 1637163 - | sugar efflux transporter S1694 1639618 - 1638503 - | hypothetical protein TERM 2020 1639183 - 1639172 - G 72 -5.8 -4.40605 | ATTCATAAACAGAAA GAGC ACAC GCTC GACGCCGGTCTGAAA TERM 2021 1639816 - 1639802 - H 79 -11.4 -3.36569 | overlap 1639800 CCAAGTGTTTAAAGA TGCGGG AAT CCCGCA AGGCGTATATGGCTG TERM 2022 1640233 - 1640221 - H 86 -9.1 -4.3898 | opp_overlap 1640225 1640226 ATCAGGTGGAGAAAA CCCTG GCG CAGGG TGCGCGTTTGTTACT TERM 2023 1640682 - 1640658 - H 72 -10.8 -2.87931 | gap 1 TTCAGCTCTGATATA CTCGCAGGTCT TTTC AGACCTGCG-G TCCAGGAGTAGAAAG yneH 1640697 - 1641623 + | glutaminase TERM 2024 1641849 - 1641867 + G 82 -11.7 -3.524 | TCGCTCAGCACGCCA CCGCGAC CTGCT GTCGCGG TTGTCTGGCTAAGTG S1697 1641623 - 1641967 + | hypothetical protein TERM 2025 1642180 - 1642190 + F 74 -5.4 -4.62069 | opp_overlap 1642180 TCATCTGCTACGTAA TAGC ATC GCTA TTTTTGCGCTAACCA TERM 2026 1642838 - 1642875 + G 89 -14.3 -3.14404 | ACATGTCTGTTGACC TTTGTCACCGGTGCGGT GGAA ATCGTACTGGTGGCAAA TTCGGTGATTGATAT S1698 1642592 - 1643539 + | hypothetical protein uxaB 1643766 - 1645217 + | altronate oxidoreductase TERM 2027 1645237 - 1645252 + F 93 -10.4 -4.58585 | ACCGTTACTTCTGAA CCCGGT TTCG ACCGGG TTTCTTATTTCACTA TERM 2028 1645830 - 1645842 + F 76 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 2029 1645925 - 1645939 + F 72 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 2030 1646394 - 1646376 - f 73 -10.2 -3.01712 | GGTTGCTTTCGAACA CCGGCCAC TGC GTGTCCGG CAGGGTGAAGACCAG TERM 2031 1646460 - 1646470 + F 76 -4.6 -5.00616 | overlap 1646455 1646454 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC TERM 2032 1647293 - 1647306 + G 79 -2.3 -5.28166 | GTTCAGCATTCTCGG TGTCG CCAT CGCCA TTTTTCTTGGTTTTC TERM 2033 1647425 - 1647415 - g 72 -4.6 -4.70659 | overlap 1647416 1647418 1647420 TGCGAGAGGTAAAAA CGAC ATT GCCG GATTCGGCAAGTGTA S1701 1647060 - 1648025 + | hypothetical protein S1702 1648787 - 1648029 - | trans-aconitate 2-methyltransferase S1703 1649117 - 1648827 - | autoinducer-2 (AI-2) modifying protein LsrG S1704 1649923 - 1649141 - | aldolase S1705 1650841 - 1649936 - | insertion element IS2 transposase InsD S1706 1651164 - 1650799 - | insertion sequence 2 OrfA protein TERM 2034 1651559 - 1651573 + r 72 -5.6 -4.41348 | GTGAACTTACCACGC CCAGCA ATG TGCCGG TTTCTTTGACAGGAG TERM 2035 1651988 - 1651976 - R 70 -9.1 -3.33525 | overlap 1651974 TTCACGCATAGAACA TGCCG AAA CGGCA GCGATATACTCCGGG ydeW 1653274 - 1652321 - | sorC family transcriptional regulator TERM 2036 1653219 - 1653203 - G 78 -7.9 -4.34402 | overlap 1653204 GTCGTGATAGTAAAA CCACGCG ATC CGCGCGA CCTGTTCTTCTTCAC TERM 2037 1653895 - 1653915 + G 79 -10.4 -3.85092 | AAAATGAAGAACTTG CTGGCGGC GCTGG GCTGCCAG TTTGATCTGCATAGT TERM 2038 1654863 - 1654893 + G 83 -9.7 -4.11805 | CTACCAGCTGTTGCG CAGCATCGCCGCA CAGAA TGTGGCTGTGCTG TTTATCTCCTCTGAT S1709 1653523 - 1655058 + | putative ATP-binding component of a transport system TERM 2039 1655590 - 1655605 + G 75 -4.6 -4.82901 | opp_overlap 1655590, overlap 1655579 1655578 1655592 GGCTGCTGGCGAAGA CGGCGT TTGG ACGCAG TTTTTATGCCACGGG ydeY 1655052 - 1656080 + | putative transport system permease protein TERM 2040 1656670 - 1656680 + G 74 -8.2 -3.86822 | GATTGGGCAAAGCCC GCGC GTG GCGC TTTATAGCGCGATTC TERM 2041 1656885 - 1656896 + G 81 -7.2 -4.71828 | GTTCCATTATCGGCA CCGC CATT GCGG TTTTATTAGTGGGAT ydeZ 1656080 - 1657072 + | putative transport system permease protein S1714 1658322 - 1658687 + | insertion sequence 2 OrfA protein S1715 1658645 - 1659550 + | insertion element IS2 transposase InsD S1716 1660412 - 1659600 - | ISEhe3 orfB S1717 1660747 - 1660469 - | ISEhe3 orfA rspA 1662038 - 1660824 - | starvation sensing protein S1719 1662570 - 1662244 - | hypothetical protein S1720 1662705 - 1663046 + | hypothetical protein ynfC 1664354 - 1663644 - | hypothetical protein S1723 1664462 - 1664767 + | hypothetical protein TERM 2042 1664806 - 1664784 - T 85 -14.2 -3.08642 | opp_overlap 1664783 1664784 ACATTATCGACTGAA CGCCGGATAT GAC ACATCCGGCG ATTTGAACATACAAC TERM 2043 1664784 - 1664806 + T 76 -12 -2.74144 | opp_overlap 1664784, overlap 1664783 ACATTATCGACTGAA CGCCGGATAT GAC ACATCCGGCG ATTTGAACATACAAC TERM 2044 1665730 - 1665711 - T 74 -5.6 -4.57073 | TATCTTCTTGAAAAA GCGCGCGA GAAA TCGAACGC CAAAATGATTGTTAT TERM 2045 1666852 - 1666830 - T 100 -9.8 -4.80453 | opp_overlap 1666842 CTAGTACAAAACAAA GGCCCAGACC ATT GGTCCAGACC GTAGTTAGTTAATCA S1727 1668099 - 1667110 - | hypothetical protein S1728 1668677 - 1668186 - | hypothetical protein S1730 1669498 - 1668998 - | hypothetical protein S1731 1670003 - 1669488 - | hypothetical protein S1732 1670802 - 1670434 - | hypothetical protein S1736 1672397 - 1671771 - | IS911 orfB TERM 2046 1672179 - 1672190 + g 77 -5.8 -4.63218 | opp_overlap 1672175 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S1738 1672939 - 1672637 - | IS911 orfA S1739 1673797 - 1673009 - | putative integrase TERM 2047 1674560 - 1674534 - H 82 -3.1 -5.54192 | gap 1 ACGAACTGAAAAAAA TGGGTATCTATA AGCG TAAAGAT-CCCA ATGGCCATTTTGTCG TERM 2048 1676156 - 1676142 - H 77 -3.5 -5.1861 | GTTACGATGAAAAAA CGCTG CCCGC CAACG CACCACGTAACGCGC TERM 2049 1676593 - 1676576 - H 86 -4.1 -5.45802 | opp_overlap 1676576, overlap 1676570 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2050 1676576 - 1676593 + H 76 -4.1 -4.93296 | opp_overlap 1676576 1676570 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC S1742 1677248 - 1677865 + | putative oxidoreductase, Fe-S subunit TERM 2051 1677988 - 1677974 - g 72 -5.7 -4.56597 | overlap 1677978 GTTCGCCGCCAAAAA TGACG CAGAC CGTCA GCACATTGTTCGTGG TERM 2052 1678231 - 1678245 + G 78 -7.8 -4.3586 | GGTTACTTGTCAGCA TGGCGC TCG GCGTCA TTTTCGTCTGGATGA S1743 1677867 - 1678721 + | putative DMSO reductase anchor subunit TERM 2053 1678728 - 1678747 + F 72 -9.2 -3.6106 | opp_overlap 1678727 1678726, overlap 1678729 GCAGGTTAACAAATT GGTGCGGG GCAA CCCGCACA TTTCAGGATGTTAGG TERM 2054 1678729 - 1678746 + F 79 -12.7 -2.76315 | opp_overlap 1678727 1678726, overlap 1678728 CAGGTTAACAAATTG GTGCGGG GCAA CCCGCAC ATTTCAGGATGTTAG TERM 2055 1678801 - 1678823 + G 95 -9.8 -4.65916 | overlap 1678799 ATAATTTTTCTGTCG CGGCGCGC GTGTTGG GCGCGCTG TTTTATTACGCTCCA TERM 2056 1678839 - 1678860 + G 70 -10.9 -2.74012 | gap 1, opp_overlap 1678843, overlap 1678842 TTTTATTACGCTCCA GAGAGTGCGG AAG CCGCAC-CTC TGGTTGCGGTACTCA TERM 2057 1678857 - 1678843 - g 75 -11.4 -2.8805 | opp_overlap 1678842 1678839 ATTACGCTCCAGAGA GTGCGG AAG CCGCAC CTCTGGTTGCGGTAC TERM 2058 1678914 - 1678939 + G 70 -6.9 -4.07885 | gap 1, opp_overlap 1678914 1678915, overlap 1678914 TGGCCTCTACCAGAA G-CGTCATTAGC GCC GCTGGTGACGGC TTTTCAGACACAGTG TERM 2059 1679233 - 1679245 + G 75 -4.8 -4.82518 | CATGGCACCTTTTTC CGTG GTCAA CACG TTTTCTTGATGTTTT S1744 1678764 - 1679378 + | twin-argninine leader-binding protein DmsD TERM 2060 1679432 - 1679446 + F 89 -4.2 -5.80248 | opp_overlap 1679432 GATTCGGCAATAATA CGTTAC AAT GTCACG TTTTTTTATCTCTTA TERM 2061 1679886 - 1679921 + G 70 -10.4 -3.14344 | opp_overlap 1679883 GCCTGGTTAAATCGC TTGCCTCGCTGCTGGT AGTA ACCAGCGGCAGTGCAA TTGGTCGCGAAGGTG TERM 2062 1680025 - 1680049 + G 77 -12.1 -2.78715 | overlap 1680028 ATGGATCGCCTGTGG GGCCGCGGC GGGAATG GCTGCGGCC TATCGTGCCCCGCTT TERM 2063 1680741 - 1680711 - g 77 -9.7 -3.64599 | opp_overlap 1680714, overlap 1680714 TGATGATATGTGAAA TGACCGGGGAGTA TCAGC TACTCCCCGGTTT ATTGATTGCCTGCGT TERM 2064 1680714 - 1680738 + G 100 -15.8 -4.33621 | opp_overlap 1680711 1680714 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG TERM 2065 1680738 - 1680714 - g 95 -15.8 -2.93585 | opp_overlap 1680714, overlap 1680711 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG S1745 1679573 - 1680829 + | putative voltage-gated ClC-type chloride channel ClcB bioD 1681477 - 1680782 - | putative dithiobiotin synthetase mlc 1682822 - 1681602 - | putative NAGC-like transcriptional regulator TERM 2066 1682266 - 1682255 - G 72 -7.2 -4.19624 | opp_overlap 1682255 1682265 CATGCTGAATATAAA CCGG TACG CCGG TATGCTGCTCCAGCG TERM 2067 1682265 - 1682300 + g 72 -6.8 -4.21908 | gap 1, opp_overlap 1682255, overlap 1682255 1682269 ATAAACCGGTACGCC GGTATGCTGCTCCAGCG CCT CGCCG-AGCGGCATCTC TTTTACATCCTCGTA TERM 2068 1682560 - 1682534 - G 70 -4.4 -4.4773 | overlap 1682528 1682536 GCAGAGCAAGGAAAA TCTCCCCGCG ACTAATG CGCAGAGAAA GATAGTGCCAGGCTT ynfL 1683868 - 1682957 - | putative LYSR-type transcriptional regulator TERM 2069 1683725 - 1683735 + g 72 -6.8 -4.25056 | overlap 1683714 AGTTCGTGCCAGCAG TCGG GCA CCGA TTTGTTGCTCCAGTG TERM 2070 1685233 - 1685268 + H 78 -12.1 -3.09516 | gap 2, opp_overlap 1685233, overlap 1685236 TGCACGCCTGAAAAA TAAGTCCGGACTGCGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2071 1685268 - 1685233 - H 100 -12.1 -4.58395 | gap 2, opp_overlap 1685233 1685236 TGCACGCCTGAAAAA TAAGTCCGGACTGCGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2072 1685236 - 1685265 + H 76 -9.4 -3.69395 | gap 2, opp_overlap 1685233, overlap 1685233 ACGCCTGAAAAATAA GTCCGGACTGCGGT AAAT ACC-C-GTCCGGAC TTATTGCCTGCTCAA TERM 2073 1685812 - 1685802 - g 72 -6.8 -4.17477 | overlap 1685803 1685805 AAAAAACAGCATAAA GCAG CAC CTGC CCAGAAAGCGCAGGC asr 1685652 - 1685960 + | acid shock protein precursor TERM 2074 1686005 - 1686035 + F 76 -11.9 -2.71924 | opp_overlap 1686003 1686006, overlap 1686004 TCGCGCCTGAAAATT ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC CTTTAGCGGAGGGTA TERM 2075 1686034 - 1686006 - f 82 -13.2 -3.08032 | opp_overlap 1686005 1686004, overlap 1686003 CGCGCCTGAAAATTA CGGTGCTAAGCG GGTAA CGTTTAGCACCG CCTTTAGCGGAGGGT S1751 1686236 - 1687057 + | hypothetical protein TERM 2076 1687098 - 1687058 - T 86 -9.1 -4.40561 | gap 1, opp_overlap 1687064 1687066, overlap 1687055 1687066 CTGTCGCAAAAATAA TGTTCAA-ACGCTGCCCG ACAGCG CGGGCAGCGTCTTCATCA GGCAAGTTTCACCAT TERM 2077 1687064 - 1687091 + T 81 -12.7 -3.14463 | opp_overlap 1687055 1687058 1687066, overlap 1687066 CAAAAATAATGTTCA AACGCTGCCCG ACAGCG CGGGCAGCGTC TTCATCAGGCAAGTT TERM 2078 1687066 - 1687089 + T 100 -15.3 -3.13403 | opp_overlap 1687055 1687058 1687066, overlap 1687064 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TCTTCATCAGGCAAG TERM 2079 1687089 - 1687066 - T 100 -15.3 -3.65722 | opp_overlap 1687066 1687064, overlap 1687055 1687058 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TCTTCATCAGGCAAG S1752 1687425 - 1687096 - | multidrug efflux system protein MdtI S1753 1687777 - 1687412 - | multidrug efflux system protein MdtJ TERM 2080 1687602 - 1687614 + g 90 -4.7 -5.40072 | opp_overlap 1687603, overlap 1687603 CACAGCGCATAAGCT ACGCC TAA GGCGA TTTTTTTAACGGCGA TERM 2081 1687603 - 1687613 + g 72 -8.2 -3.83561 | opp_overlap 1687603, overlap 1687602 ACAGCGCATAAGCTA CGCC TAA GGCG ATTTTTTTAACGGCG TERM 2082 1687899 - 1687889 - H 74 -8.2 -3.92804 | overlap 1687890 GAAGAAAGGACTAAA GCGC GTT GCGC CAGTGCTGCTCACCT tqsA 1688188 - 1689222 + | putative transport protein TERM 2083 1689244 - 1689219 - T 95 -13.3 -3.69068 | overlap 1689217 1689220 CGATCTCAATAAAGA GTGACGGCCTC CGCA GAGGCCGTCAG GGTTACAGAGCTTTC TERM 2084 1689243 - 1689220 - T 100 -16.8 -2.80958 | overlap 1689219 1689217 GATCTCAATAAAGAG TGACGGCCTC CGCA GAGGCCGTCA GGGTTACAGAGCTTT pntB 1690635 - 1689247 - | pyridine nucleotide transhydrogenase pntA 1692193 - 1690646 - | NAD(P) transhydrogenase subunit alpha TERM 2085 1690760 - 1690734 - G 72 -5.8 -4.3898 | overlap 1690738 AGCACCGCGATAAAA CTAAGGAAGCTA ACC CAGCCTCCCTGG CCAATCTGCAACAGT S1757 1692702 - 1693646 + | hypothetical protein TERM 2086 1693667 - 1693683 + F 83 -10.8 -3.81062 | opp_overlap 1693667, overlap 1693659 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2087 1693683 - 1693667 - f 77 -10.8 -3.31461 | opp_overlap 1693667 1693659 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2088 1694245 - 1694257 + G 73 -4.1 -4.77036 | TGCATCGGCTTTATT GTGGA TTG TTCAC TTTTTGATCCTGCGC S1758 1693832 - 1695214 + | putative arginine/ornithine antiporter TERM 2089 1695887 - 1695907 + G 76 -10.5 -3.35867 | opp_overlap 1695887, overlap 1695877 1695891 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGTTGC TERM 2090 1695907 - 1695887 - g 77 -8.3 -4.06419 | opp_overlap 1695877 1695887 1695891 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGTTGC ydgB 1695251 - 1695973 + | short chain dehydrogenase ydgC 1696305 - 1695970 - | hypothetical protein rstA 1696434 - 1697177 + | DNA-binding transcriptional regulator RstA TERM 2091 1697298 - 1697317 + F 80 -5.6 -5.00616 | overlap 1697299 TATAATCGCCTCGTC CCTGCGTC TTAT GGCGCAGA TTTTTTACAACAAAC TERM 2092 1697299 - 1697316 + F 72 -9.1 -3.60048 | overlap 1697298 ATAATCGCCTCGTCC CTGCGTC TTAT GGCGCAG ATTTTTTACAACAAA S1762 1697675 - 1698721 + | putative transporter TERM 2093 1699852 - 1699816 - g 73 -3.6 -4.87665 | CGGTACGGATAAAAA CGCTCATGCAAGGCCA TTATG CGGCGTTGGATATGCG CTTAATGGAGCGCGT rstB 1698900 - 1700201 + | sensor protein RstB tus 1700277 - 1701206 + | DNA replication terminus site-binding protein fumC 1702606 - 1701203 - | fumarate hydratase TERM 2094 1701723 - 1701692 - G 76 -12.2 -2.50443 | gap 1, opp_overlap 1701691, overlap 1701691 TGAGATTTCACCAAT TCCGCAGCGCGGGCC AGA GGCCAGC-CAGCGGA CATCATTGGCGATTT TERM 2095 1702742 - 1702727 - R 100 -11.8 -5.47218 | opp_overlap 1702726 1702724 1702722 1702727 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC TERM 2096 1702727 - 1702742 + r 76 -11.8 -2.68607 | opp_overlap 1702727, overlap 1702726 1702724 1702722 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC fumA 1704395 - 1702749 - | fumarase A, fumarate hydratase class I; aerobic isozyme TERM 2097 1703369 - 1703384 + g 72 -4.7 -4.66163 | CAGGGATATATTTAC CTGGA TTATGT TCCAG TTTTTCGATCCAGAT TERM 2098 1704804 - 1704843 + G 95 -15.2 -3.06583 | gap 1, opp_overlap 1704796, overlap 1704809 AAATCGACTCTGCTC GGAGAGGCCGTT-GCCAAA CGC TTTGGCGAACTGCCTTTCC TGTTCAAAGTATTAT TERM 2099 1704809 - 1704838 + G 81 -10.1 -3.92592 | gap 1, opp_overlap 1704796, overlap 1704804 GACTCTGCTCGGAGA GGCCGTT-GCCAAA CGC TTTGGCGAACTGCC TTTCCTGTTCAAAGT TERM 2100 1705075 - 1705095 + G 72 -9.7 -3.29973 | CCCTACTCCAGCCGG TCGCCGG TGCACAT CCGGCGA TTGCTCACTTTTTAC manA 1704594 - 1705769 + | mannose-6-phosphate isomerase TERM 2101 1705827 - 1705847 + F 95 -12.6 -4.27483 | opp_overlap 1705822 1705825 1705824 AGGCTTATAACACCT TCAGGCGG CCAGT CCGCCTGA TTTCATTTTATGGAT TERM 2102 1706397 - 1706380 - g 73 -4 -4.86773 | overlap 1706381 1706382 CAAAAGGATGAAAAA GTCGCC TTTAGC GGCGGC GAGTTCCAGTTAAAT TERM 2103 1707046 - 1707028 - g 74 -8.1 -4.04927 | gap 1 GCAACGACTAAAGAA GCGCC-GC AAAC GCTGGCGC AGGAAGTAGATCGTT ydgA 1705870 - 1707345 + | hypothetical protein TERM 2104 1707416 - 1707393 - T 89 -11 -4.1196 | opp_overlap 1707393, overlap 1707380 AATTCACGGCCAAAA CGCCGGAG AATTTTCA CTCCGGCG TTTTCATCTGAAAAC TERM 2105 1707393 - 1707416 + T 91 -11 -4.34402 | opp_overlap 1707393 1707380 AATTCACGGCCAAAA CGCCGGAG AATTTTCA CTCCGGCG TTTTCATCTGAAAAC TERM 2106 1707571 - 1707600 + T 87 -10 -4.3255 | opp_overlap 1707574, overlap 1707574 TTTGTCAACAATCTG AAACGCCGGAGG TTTTTC TCTCCGGCGTTA TTTCTTACTTCAGCA TERM 2107 1707574 - 1707597 + T 95 -11.7 -4.27694 | opp_overlap 1707574, overlap 1707571 GTCAACAATCTGAAA CGCCGGAGG TTTTTC TCTCCGGCG TTATTTCTTACTTCA TERM 2108 1707597 - 1707574 - T 86 -11 -3.72051 | opp_overlap 1707571 1707574 GTCAACAATCTGAAA CGCCGGAG GTTTTTCT CTCCGGCG TTATTTCTTACTTCA uidC 1708870 - 1707605 - | membrane-associated protein TERM 2109 1709828 - 1709862 + r 100 -14.3 -3.69395 | gap 1, opp_overlap 1709819 AATGAAGCGGCAATC CCACGAGC-CGCGCCC AGAC GGGCGCGAGATTGTGG TTGTTGGGTCATCGC uidA 1711643 - 1709940 - | beta-D-glucuronidase TERM 2110 1710428 - 1710441 + g 73 -3.8 -4.83169 | opp_overlap 1710428, overlap 1710426 CAATACTCCACATCA CCAC GCTTGG GTGG TTTTTGTCACGCGCT TERM 2111 1711497 - 1711519 + g 78 -7.6 -4.30719 | opp_overlap 1711496 CTGATCGTTAAAACT GCCTGGCACT GCA ATTGCCCGGC TTTCTTGTAACGCGC uidR 1712621 - 1712031 - | repressor for uid operon S1774 1713529 - 1713026 - | IS1 orfB S1775 1713723 - 1713448 - | IS1 orfA TERM 2112 1713839 - 1713852 + r 81 -3.9 -5.40072 | CCCCCGGCGCAATGC TATTC ACCC GAATA TTTTTTTCACCCAGG TERM 2113 1714444 - 1714428 - R 84 -5.1 -5.3104 | opp_overlap 1714437 TCAGTAAAAATAAAA GGCAC CGCCTGT GTGCC ACATTTTTTATCATT TERM 2114 1714437 - 1714447 + r 85 -5.4 -5.37345 | opp_overlap 1714428 ATAAAAGGCACCGCC TGTG TGC CACA TTTTTTATCATTAAC malI 1715534 - 1714506 - | DNA-binding transcriptional repressor MalI TERM 2115 1716076 - 1716066 - g 72 -6.8 -4.24342 | TGGTTGACCAATAAA GGCA TTC TGCC AACCACAGATGCCGC TERM 2116 1716143 - 1716174 + G 74 -10.2 -3.47573 | gap 1 GATCCAGTCGATCGA TACCGG-GATCCTCG GTG CGGTGATCGCCGGTA TTATCGTCTGGATGC malX 1715709 - 1717301 + | bifunctional maltose and glucose-specific PTS system components IICB malY 1717311 - 1718483 + | cystathionine beta-lyase; maltose regulon modulator TERM 2117 1718483 - 1718524 + F 84 -8.7 -4.652 | overlap 1718484 CCGCGCTGTTCGCTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA TTTTTACCCTGCTTT TERM 2118 1718484 - 1718523 + F 85 -12.2 -3.38036 | overlap 1718483 CGCGCTGTTCGCTAA CCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGG ATTTTTACCCTGCTT TERM 2119 1719568 - 1719556 - g 75 -4.7 -4.80882 | AGCGCAGAGGAAAAA CGCGC ACT GCGAG AAAAAGTCGCCGCGA add 1718587 - 1719588 + | adenosine deaminase TERM 2120 1719619 - 1719595 - T 100 -17.3 -5.1963 | opp_overlap 1719595 GCGAAGTAACAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTCACGCAAGGC TERM 2121 1719595 - 1719619 + T 100 -17.3 -4.56597 | opp_overlap 1719595 GCGAAGTAACAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTCACGCAAGGC S1781 1720664 - 1719624 - | putative oxidoreductase TERM 2122 1721053 - 1721075 + H 72 -6.3 -4.3208 | gap 1 GCACTTGTGGAGCGA CATGCTGCCC GTCC GGGT-GCATG TTTTCACTTGTCGGA S1782 1721305 - 1721520 + | oriC-binding nucleoid-associated protein TERM 2123 1721644 - 1721663 + G 75 -7 -4.3014 | overlap 1721648 TATTGGAGGCTGGTT GCTTGGCC CGTT GGCCTGGC TTTTAGTCGCTCTGT S1783 1721606 - 1722046 + | hypothetical protein S1784 1722123 - 1722704 + | Na(+)-translocating NADH-quinone reductase subunit E S1785 1722704 - 1723282 + | electron transport complex protein RnfB TERM 2124 1723323 - 1723307 - g 87 -4.5 -5.28176 | overlap 1723312 TGCATTCAGAAAAAA TAAAATC TGG GATTTCA ACGGCGGCATCCATC TERM 2125 1723359 - 1723312 - g 100 -5.5 -5.49579 | overlap 1723307 TCAGAAAAAATAAAA TCTGGGATTTCAACGGCGGCA TCCATC CACCGGAGATGAAAACCCAGA CCAACGGTACCCCCC TERM 2126 1723372 - 1723399 + G 86 -6.9 -4.90079 | overlap 1723373 1723374 AGACCAACGGTACCC CCCTGCGCCAG GTACTA CTGGCGCAGCA TTTTGTTATTCCACT TERM 2127 1723373 - 1723398 + G 74 -10.4 -3.52963 | overlap 1723372 1723374 GACCAACGGTACCCC CCTGCGCCAG GTACTA CTGGCGCAGC ATTTTGTTATTCCAC TERM 2128 1723374 - 1723397 + G 85 -13.9 -2.71055 | overlap 1723373 1723372 ACCAACGGTACCCCC CTGCGCCAG GTACTA CTGGCGCAG CATTTTGTTATTCCA TERM 2129 1723788 - 1723774 - g 72 -8.6 -3.80142 | GAGATAAGATTGAAA CGTTGA TTA TCAACG CTGCTGAGTGCGAGC TERM 2130 1725439 - 1725423 - g 82 -11.5 -3.54424 | opp_overlap 1725423, overlap 1725405 GTCGATCCGCGCAAA GCCGCAG TTG CCGCGGC TATTGCCCGCGTTCA S1786 1723275 - 1725497 + | electron transport complex protein RnfC TERM 2131 1725592 - 1725608 + G 93 -5.8 -5.27477 | opp_overlap 1725592, overlap 1725593 CAGCCGTGCCAGGAA TCGCAG CGCAA CTGCGG TTTTTTGGTTGGGGT rnfD 1725498 - 1726556 + | electron transport complex protein RnfD S1788 1726560 - 1727180 + | electron transport complex protein RnfG TERM 2132 1727574 - 1727550 - g 77 -3.4 -5.03314 | opp_overlap 1727550, overlap 1727551 TTCACCGCCAAAAAA GGTCCGGCGC TTTCG GCACTGGACG GCTTTTCAATTGGTA TERM 2133 1727592 - 1727606 + G 72 -11.4 -2.50195 | overlap 1727591 1727590 1727593 TTTTCAATTGGTACG GGCGCA ACC TGCGCC ATGTTCGTGCTGGGT ydgQ 1727184 - 1727879 + | SoxR-reducing system protein RsxE nth 1727879 - 1728514 + | endonuclease III TERM 2134 1728540 - 1728521 - f 84 -8.6 -4.66987 | opp_overlap 1728520 1728521 GACATCTGAAGAAAA GGGGTAAC ACCG ATTACCCC ATTGATAACCTTTCT TERM 2135 1729166 - 1729146 - g 76 -4 -4.99134 | opp_overlap 1729150 1729156, overlap 1729150 1729151 1729157 ACTGCAAACCAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTCAAACAA TERM 2136 1729177 - 1729150 - g 74 -8.6 -3.90592 | gap 1, opp_overlap 1729150 1729156 1729166 1729169, overlap 1729146 1729151 1729157 CAAACCAAAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAGGCGTT TERM 2137 1730161 - 1730196 + G 70 -11.2 -2.7924 | gap 1, opp_overlap 1730153 1730152 1730150, overlap 1730158 1730156 ACAAGATGGGTGATA CCCTGCCGA-TGCCAAC CAA GTTTGCAATCGGCATGG TGATGTGTTCTGGTG tppB 1729125 - 1730627 + | putative tripeptide transporter permease TERM 2138 1730651 - 1730673 + F 100 -13.5 -6.36459 | opp_overlap 1730651 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTTGTTCAG TERM 2139 1730673 - 1730651 - f 86 -13.5 -3.30635 | opp_overlap 1730651 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTTGTTCAG TERM 2140 1730850 - 1730838 - g 84 -4.1 -5.28481 | opp_overlap 1730838 GATTTAATGAAAAAA CGTCT CGA AAACG GTGACGATTACTTTT TERM 2141 1731023 - 1731013 - g 70 -5.4 -4.36914 | TTTCCCGCTATAAAA CCAT CGA ATGG CTGAATTACATCGCC gst 1730733 - 1731338 + | glutathionine S-transferase pdxY 1732245 - 1731382 - | pyridoxamine kinase TERM 2142 1732291 - 1732262 - R 100 -10.7 -4.82901 | opp_overlap 1732265, overlap 1732263 1732265 TTCCCTGTATAAAAA CCAGGGGGAGTGA TTTC TCACTCCCCCTTT CCACTTAATGCATTA TERM 2143 1732290 - 1732263 - R 93 -14.2 -3.49419 | opp_overlap 1732265, overlap 1732262 1732265 TCCCTGTATAAAAAC CAGGGGGAGTGA TTTC TCACTCCCCCTT TCCACTTAATGCATT TERM 2144 1732265 - 1732288 + r 100 -16.8 -3.67976 | opp_overlap 1732265 1732263 1732262 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA TERM 2145 1732288 - 1732265 - R 100 -16.8 -3.31915 | opp_overlap 1732265, overlap 1732263 1732262 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA tyrS 1733578 - 1732304 - | tyrosyl-tRNA synthetase TERM 2146 1732686 - 1732703 + g 84 -4.1 -5.21506 | gap 1, overlap 1732661 1732658 1732683 1732687 AGTACATACTGGGCG C-GCGGTG CTT TACCGCTG TTTTTATCTTCTTCT TERM 2147 1732687 - 1732701 + g 76 -7.8 -4.20977 | overlap 1732661 1732658 1732683 1732686 GTACATACTGGGCGC GCGGTG CTT TACCGC TGTTTTTATCTTCTT pdxH 1734363 - 1733707 - | pyridoxamine 5'-phosphate oxidase TERM 2148 1733786 - 1733761 - G 73 -4 -4.83169 | gap 1 ACGCTGGTACAAAAA GCGGTCATGCA GGCGA TGC-TCACCGC CCTGCCAGAACTCAA TERM 2149 1734111 - 1734132 + g 81 -5.9 -4.78107 | gap 1, overlap 1734114 CTTTACGGCTACCGA GGT-TGGTGT AAA ACACCATGCC TTTTTCGTCGTAATG TERM 2150 1734291 - 1734306 + g 72 -7.5 -3.93262 | overlap 1734303 CGGCGGGAAGATCGC GGCGG CGTAAC CCGCC TTTGGTGTATTCACG ydhA 1734670 - 1734422 - | hypothetical protein S1797 1735597 - 1734692 - | insertion element IS2 transposase InsD S1798 1735920 - 1735555 - | insertion sequence 2 OrfA protein anmK 1737294 - 1736185 - | anhydro-N-acetylmuramic acid kinase TERM 2151 1736311 - 1736349 + g 100 -16.8 -3.51924 | opp_overlap 1736325 AGCCAATGCTTCCAT GTCATCGCCACTAATGCC AAC GGCATCGGTGGTGGTGAC TTCTGTGCCTAGCAG slyB 1737568 - 1738035 + | putative outer membrane protein TERM 2152 1738040 - 1738075 + T 86 -11.8 -3.5332 | opp_overlap 1738040, overlap 1738037 1738029 CTCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT TERM 2153 1738075 - 1738040 - T 95 -11.8 -3.90744 | opp_overlap 1738037 1738029 1738040 CTCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT slyA 1738516 - 1738082 - | transcriptional regulator SlyA S1802 1738717 - 1738953 + | hypothetical protein TERM 2154 1739622 - 1739608 - g 73 -4.2 -4.79955 | opp_overlap 1739608 ATAGTGATAACAAAA CGTTAC AGG GTCACG TTTCCAGTATCGGTC S1803 1738947 - 1739813 + | hypothetical protein TERM 2155 1741306 - 1741337 + T 70 -9.4 -3.35798 | gap 1, overlap 1741304 TCTGGCAAAAATCGT TGGCGTTGCGCTGGC TTG GCTAGCGTT-CGCCA TTCTGCGTCCAGGAT TERM 2156 1741754 - 1741731 - T 70 -10.2 -2.52516 | opp_overlap 1741731 1741732 1741733, overlap 1741730 CCCGTCATCATCAAC CTGCCGCCCG TGAG CTGGCGGCAA TTGTCTGGCGGCTGT TERM 2157 1741732 - 1741753 + T 73 -11.5 -2.6914 | opp_overlap 1741731 1741730, overlap 1741731 1741733 CCGTCATCATCAACC TGCCGCCCG TGAG CTGGCGGCA ATTGTCTGGCGGCTG sodC 1742362 - 1741826 - | superoxide dismutase TERM 2158 1741863 - 1741873 + g 72 -8.2 -3.78329 | opp_overlap 1741844 TAGCGTTCACCGCCA CCGC CCA GCGG TTTAGGTTGATCGGA TERM 2159 1742074 - 1742101 + g 81 -11.2 -3.69902 | gap 1, opp_overlap 1742073 1742071, overlap 1742096 1742098 TTTGTGGATCAAGAT GCCCGC-CTGCGG ATT CCGCGGCGCTGGC TTTGCCATCTTTGGT S1806 1743324 - 1742428 - | hypothetical protein S1808 1743750 - 1743373 - | hypothetical protein S1807 1743715 - 1744314 + | hypothetical protein TERM 2160 1744301 - 1744320 + FH 81 -4.9 -5.24129 | overlap 1744302 AAAACATTATTGCGA CGCCTGC CGTTTA GCAGGCA TTTTTTATCACCAGA TERM 2161 1744302 - 1744319 + FH 72 -8.4 -3.73995 | overlap 1744301 AAACATTATTGCGAC GCCTGC CGTTTA GCAGGC ATTTTTTATCACCAG nemA 1744351 - 1745448 + | N-ethylmaleimide reductase TERM 2162 1745807 - 1745794 - g 71 -2.3 -5.01732 | overlap 1745795 AAGCGTGCGAAAAAA TCCGT CAAA ACGGG GGTAACGTGACCCGT gloA 1745529 - 1745936 + | glyoxalase I TERM 2163 1745942 - 1745969 + F 73 -9.9 -3.46647 | gap 1, overlap 1745940 AGGCAACTAATCTCC TGCCGGGCGTGA ACTCA TCGCGCCCG-CA TCTTTACTGCATCGA TERM 2164 1746062 - 1746076 + G 77 -7.1 -4.45077 | opp_overlap 1746061 TAACGCTCAACTTAC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA rnt 1746039 - 1746686 + | ribonuclease T TERM 2165 1747817 - 1747829 + T 74 -6.9 -4.19624 | GATCTGGTGATTCAG GTGGC AAC GCCGC TTTCTGTTGCCAGTG TERM 2166 1750889 - 1750869 - T 70 -9 -3.42283 | overlap 1750867 1750881 1750884 CAAGCCACGCAAACA CGCCACTA TACAC CAGTGGCG CTCTCCGCCAACGAT S1813 1752429 - 1751281 - | putative virulence protein TERM 2167 1751856 - 1751869 + g 86 -3.8 -5.41143 | overlap 1751843 1751841 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTTTGAAAACTG TERM 2168 1752144 - 1752175 + g 95 -10.2 -4.65895 | gap 1 CGAGCTTAACGTCCT GCGGGTAGCGGAATG CAG CATTCTG-TCCCCGC TTTTTGAATCGGGGA TERM 2169 1752202 - 1752214 + g 81 -6.3 -4.82901 | GGGAAAAGCAGCCCG CTTCT GGA AGAAG TTTTTGTAAGCCCGC TERM 2170 1752535 - 1752525 - R 76 -4.6 -5.04249 | CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT TERM 2171 1752982 - 1752937 - R 76 -8.1 -4.11216 | opp_overlap 1752950, overlap 1752938 TGGTCAGGTGGAAAA CCGCGCCTTATATCCCCGCCC TGAA GGACGAGGTTTTACGGCGCAC CGGATAAAGGACTGA TERM 2172 1752981 - 1752938 - R 78 -11.6 -3.06515 | opp_overlap 1752950, overlap 1752937 GGTCAGGTGGAAAAC CGCGCCTTATATCCCCGCCC TGAA GGACGAGGTTTTACGGCGCA CCGGATAAAGGACTG TERM 2173 1753024 - 1752991 - R 80 -9.6 -3.89346 | opp_overlap 1752994 1753014, overlap 1752994 GGCGCACCGGATAAA GGACTGACGGATGC CCGTTC GCATCCGTCAGTAT TGCAGGACGGATTAT TERM 2174 1753021 - 1752994 - R 93 -15.7 -3.01918 | opp_overlap 1752994 1753014, overlap 1752991 GCACCGGATAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT TERM 2175 1752994 - 1753021 + r 93 -15.7 -3.01791 | opp_overlap 1752994 1752991, overlap 1753014 GCACCGGATAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT ydhD 1753383 - 1753036 - | hypothetical protein TERM 2176 1754036 - 1754025 - g 70 -3.6 -4.63486 | overlap 1754012 1754011 ACGCCGTCAATAAAA CGGC CTCA GCCA GCTTTACCGAAAAGT TERM 2177 1754127 - 1754098 - g 90 -7.9 -4.81249 | gap 1 TGTGAAAGTCAAAAA TGCCGCGTCAGGAA CCC TTGCCGACGCG-CA CAAAGCGAAGGTGCA TERM 2178 1754160 - 1754147 - g 84 -8.1 -4.62471 | GCGAAGGTGCAAAAA GCCAC GAAA GTGGC AATGAATAAACTGAT ydhO 1753718 - 1754545 + | putative lipoprotein TERM 2179 1754578 - 1754548 - f 79 -9.2 -4.09511 | gap 1, opp_overlap 1754544 1754549 1754550, overlap 1754549 AACACTTCGCTAAAA CTTTACCCTGTTG TTACGG CAACAGGGT-AAG TTCATCTTTTGTCTC TERM 2180 1754549 - 1754578 + F 88 -12.3 -3.59432 | opp_overlap 1754548 1754549, overlap 1754544 1754550 ACACTTCGCTAAAAC TTTACCCTGTTGT TACG GCAACAGGGTAAG TTCATCTTTTGTCTC TERM 2181 1754550 - 1754577 + F 83 -13.6 -2.74575 | opp_overlap 1754548 1754549, overlap 1754549 1754544 CACTTCGCTAAAACT TTACCCTGTTGT TACG GCAACAGGGTAA GTTCATCTTTTGTCT sodB 1754673 - 1755254 + | superoxide dismutase TERM 2182 1755367 - 1755388 + T 100 -14.5 -5.38326 | opp_overlap 1755361 TGTCAGCAACTGTAA CGCAGAAGG TTAT CCTTCTGCG TTTTTGTTTAATTAG TERM 2183 1755416 - 1755432 + T 70 -5.1 -4.42653 | overlap 1755406 1755404 TAGCTGTTAGCAACG CAAACTG TTT CAGGTTG TTTTCTGGCTGACAT S1817 1756569 - 1755400 - | putative transport protein TERM 2184 1756686 - 1756652 - H 72 -3 -4.96276 | ACAAAAAAATGAAAA TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA ACAAACAGGAAGGAG TERM 2185 1757172 - 1757138 - g 79 -4.4 -4.90079 | gap 1, opp_overlap 1757138, overlap 1757140 ATGGCAACAATAAAA GATGTAGC-GAAACG AGCAAA CGTTTCCACTACAAC TGTGTCACACGTGAT TERM 2186 1757220 - 1757196 - g 91 -9.3 -4.71828 | overlap 1757217 ACGTGATCAACAAAA CACGTTTCGTC GCT GAAGAAACGCG CAACGCCGTGTGGGC TERM 2187 1757660 - 1757648 - g 72 -10.5 -3.06796 | CGTTATCTGATTGAA CGCGG TCA CCGCG AAATCGGCGTCATCC TERM 2188 1757697 - 1757718 + G 81 -8.7 -4.37092 | gap 1, opp_overlap 1757697 1757695 CGCTGGAACGTAACA CCGGCGCAGG CCG CCT-TGCCGG TTTTATGAAGGCGAT TERM 2189 1757947 - 1757967 + G 74 -7.5 -4.07687 | opp_overlap 1757950 1757951, overlap 1757950 1757951 GCTGATCGGTTATGA TAACGTGCG CAA CGCGCGCTA TTTTACGCCGGCGCT TERM 2190 1757951 - 1757965 + G 73 -9.2 -3.63744 | opp_overlap 1757950 1757951, overlap 1757950 1757947 ATCGGTTATGATAAC GTGCGC AAC GCGCGC TATTTTACGCCGGCG purR 1757123 - 1758148 + | DNA-binding transcriptional repressor PurR ydhB 1759077 - 1758145 - | putative DNA-binding transcriptional regulator ydhC 1759190 - 1760401 + | inner membrane transport protein YdhC cfa 1760692 - 1761840 + | cyclopropane fatty acyl phospholipid synthase ribE 1762521 - 1761880 - | riboflavin synthase subunit alpha TERM 2191 1762079 - 1762055 - G 70 -3.5 -4.69027 | gap 1, overlap 1762047 1762056 1762057 AAATGGACGCAAAAA CGCGTTGGCG TGACTT CGCCGACG-G TCAGGCTAATACCGT TERM 2192 1762678 - 1762695 + H 80 -6.2 -4.85129 | overlap 1762693 CTGCTTCTTCTTTTT GCTGCC CATTCA GGCGGC TTTTTAGTCTCTCAT ydhE 1762736 - 1764109 + | multidrug efflux protein TERM 2193 1764148 - 1764114 - T 79 -9.4 -4.15044 | gap 1, opp_overlap 1764116 1764119, overlap 1764119 CGTCCCGCTAATAAA GACA-AGGCGCAACC TTCACG GGTTGCGCCTGTGTT TTTACGCAGGCTGGA TERM 2194 1764116 - 1764146 + T 100 -12.7 -4.57073 | gap 1, opp_overlap 1764114 1764119, overlap 1764119 TCCCGCTAATAAAGA CA-AGGCGCAACCT TCAC GGGTTGCGCCTGTG TTTTTACGCAGGCTG TERM 2195 1764142 - 1764119 - T 100 -13.9 -3.96841 | opp_overlap 1764119 1764116, overlap 1764114 CGCTAATAAAGACAA GGCGCAACC TTCACG GGTTGCGCC TGTGTTTTTACGCAG TERM 2196 1764119 - 1764142 + T 95 -14.6 -3.53855 | opp_overlap 1764114 1764119, overlap 1764116 CGCTAATAAAGACAA GGCGCAACCT TCAC GGGTTGCGCC TGTGTTTTTACGCAG S1824 1765406 - 1764150 - | hypothetical protein TERM 2197 1764442 - 1764430 - G 74 -7.7 -4.09805 | opp_overlap 1764430 1764429 TTACCAACAATGAAA GTGAC GCT GTCAC CTTTTACCGTACTGC TERM 2198 1765583 - 1765572 - H 70 -2.2 -5.07486 | overlap 1765555 GATCCTGAATAAAAA TCGC CCTT GCAA ATCAACAAAATATAG TERM 2199 1765842 - 1765873 + H 80 -6.7 -4.76075 | gap 2, overlap 1765867 1765869 TTGACATGGTGGGGG TC-GGTG-GTTCGAG TCCA CTCGGACGCACCAGA TTTTCTTAATCTGGT TERM 2200 1765867 - 1765889 + H 76 -4.9 -4.78661 | overlap 1765842 1765869 GAGTCCACTCGGACG CACCAGATT TTCTT AATCTGGTC TTTTCCTTTTTCCCT TERM 2201 1765869 - 1765887 + H 71 -7.5 -3.99386 | overlap 1765842 1765867 GTCCACTCGGACGCA CCAGATT TTCTT AATCTGG TCTTTTCCTTTTTCC S1827 1765979 - 1766284 + | hypothetical protein TERM 2202 1766284 - 1766266 - T 75 -9.6 -3.54676 | opp_overlap 1766262, overlap 1766262 ACTTAGTCAAATCAA TCAGGCAA AAC TCGCCTGA CAGAATTTAATCAAG TERM 2203 1766299 - 1766313 + T 79 -8.5 -4.3014 | opp_overlap 1766299 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTCATCCCTGTCT TERM 2204 1766569 - 1766585 + T 75 -10.9 -3.05844 | opp_overlap 1766567 1766565 1766564 AACTCAAAAATGATG CTGGCAA ATA TTGCCAG TATTGAAATACCGCC S1829 1768656 - 1767844 - | hypothetical protein ydhU 1769445 - 1768660 - | hypothetical protein S1831 1770161 - 1769442 - | putative oxidoreductase, Fe-S subunit S1832 1770812 - 1770174 - | hypothetical protein TERM 2205 1772001 - 1772017 + r 73 -4.3 -4.87037 | opp_overlap 1772004, overlap 1772002 ACAACGGATCGGGCA AGAGTGG CAG CCGCTCA TTTTTACTGTGTATT S1834 1773573 - 1772947 - | hypothetical protein TERM 2206 1773758 - 1773748 - R 79 -2.6 -5.31275 | opp_overlap 1773748 GGTTAGGAGAAAAAA TAAT GTG ATTA TTCTGAGCCCTTAAC TERM 2207 1774025 - 1773994 - R 77 -8.9 -3.83675 | gap 1, opp_overlap 1773991, overlap 1773996 CAACTGAAGCAAGAA TATCAGGATGAAGC TTACC GCCTCATCCTGA-A TGGTCATTTTACCAG TERM 2208 1774024 - 1773996 - R 93 -14 -3.4945 | opp_overlap 1773991, overlap 1773994 ACTGAAGCAAGAATA TCAGGATGAAGC TTACC GCCTCATCCTGA ATGGTCATTTTACCA S1835 1774238 - 1774029 - | hypothetical protein S1836 1774325 - 1774600 + | IS1 orfA S1837 1774519 - 1775022 + | IS1 orfB TERM 2209 1776531 - 1776543 + G 81 -9.1 -4.08706 | opp_overlap 1776531 1776530 1776528 GCAAAAGGTAAATAC CCGCT GGA AGCGG TTTCTATCATGGCGA pykF 1775571 - 1776983 + | pyruvate kinase TERM 2210 1777031 - 1777016 - f 79 -11.8 -3.12847 | opp_overlap 1777016 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2211 1777016 - 1777031 + F 100 -11.8 -5.99154 | opp_overlap 1777016 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2212 1777456 - 1777431 - g 70 -9.7 -3.17212 | gap 1 TGACCAGCTGAGCAA CGACGTGAACGC AAT GCGTTC-CGACG TTCAGGCTGCTAAAG lpp 1777294 - 1777530 + | murein lipoprotein TERM 2213 1777570 - 1777552 - T 100 -14.6 -4.74103 | opp_overlap 1777552 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTCTGCTA TERM 2214 1777552 - 1777570 + T 100 -14.6 -5.74122 | opp_overlap 1777552 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTCTGCTA ynhG 1778597 - 1777593 - | hypothetical protein TERM 2215 1778427 - 1778448 + g 71 -2.1 -4.88388 | opp_overlap 1778428 1778430, overlap 1778428 TGCTGCAGTATCAAA ACGTCGGGC AATA GCCTGAAGG TTTTTATCCCCTTCT ynhA 1779162 - 1778746 - | cysteine desufuration protein SufE S1842 1780395 - 1779175 - | selenocysteine lyase ynhC 1781663 - 1780392 - | cysteine desulfurase activator complex subunit SufD sufC 1782384 - 1781638 - | cysteine desulfurase ATPase component ynhE 1783881 - 1782394 - | cysteine desulfurase activator complex subunit SufB TERM 2216 1783542 - 1783531 - G 81 -7.2 -4.65895 | opp_overlap 1783530 CTCTTTACTTAAAAA GGCG TTCG CGCC AGTTTGCTGCACCGC sufA 1784258 - 1783890 - | iron-sulfur cluster assembly scaffold protein TERM 2217 1784581 - 1784551 - R 100 -17 -5.05116 | opp_overlap 1784551 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG TERM 2218 1784551 - 1784581 + r 100 -19.2 -3.86897 | opp_overlap 1784551 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG S1847 1785075 - 1784806 - | hypothetical protein TERM 2219 1785051 - 1785016 - G 74 -9.8 -3.48276 | overlap 1785018 1785019 CTCGCTTTTAGACAA GACCTGCACAGTATAC CACC GTTTACTGTGCAGATA ATGACCAAAAGCAAT TERM 2220 1785049 - 1785018 - G 83 -12.4 -3.31726 | overlap 1785016 1785019 CGCTTTTAGACAAGA CCTGCACAGTATAC CACC GTTTACTGTGCAGA TAATGACCAAAAGCA TERM 2221 1785048 - 1785019 - G 84 -13.7 -2.58822 | overlap 1785018 1785016 GCTTTTAGACAAGAC CTGCACAGTATAC CACC GTTTACTGTGCAG ATAATGACCAAAAGC TERM 2222 1785129 - 1785102 - R 70 -4.8 -4.43859 | overlap 1785104 GACAACGTCACAAAA TGGCGGTCGTCA ATCG TGACGAACAGCA CAAACGCCCTTTCTC S1848 1785504 - 1785094 - | hypothetical protein ydiJ 1788557 - 1785501 - | putative oxidase TERM 2223 1788159 - 1788138 - G 76 -3.7 -5.00616 | opp_overlap 1788152 TTCCGGCGCAAAAAA GTAGCCGAA CGGT TTCAGGTAC TGATTGAGTTGGTCT S1850 1788946 - 1790058 + | putative inner membrane protein TERM 2224 1790097 - 1790055 - f 72 -8.4 -3.80019 | opp_overlap 1790066, overlap 1790060 CGAGAAACCGAATAA GTAATTTCTCATCAGGCGGC TCT GCCGCCTGATTGTTAATCAC CGCTAATTGATATTT TERM 2225 1790066 - 1790086 + F 100 -16.9 -3.72027 | opp_overlap 1790060 1790055 ATAAGTAATTTCTCA TCAGGCGGC TCT GCCGCCTGA TTGTTAATCACCGCT TERM 2226 1790322 - 1790341 + F 100 -3.5 -5.82388 | overlap 1790323 CTGTGTGTAGTCTTT TCCCATC TCCCAC GATGGGC TTTTTTTTAACATTT TERM 2227 1790323 - 1790340 + F 71 -7 -4.06993 | overlap 1790322 TGTGTGTAGTCTTTT CCCATC TCCCAC GATGGG CTTTTTTTTAACATT S1851 1790487 - 1790843 + | hypothetical protein S1852 1791003 - 1792148 + | putative transport system permease protein S1853 1792442 - 1793602 + | putative amino acid/amine transport protein TERM 2228 1794077 - 1794065 - g 70 -3.5 -4.66535 | opp_overlap 1794053 AAGGTTTAAAAGAAA TTAAA CTC TTTAA CCGTCGGGATGAGTT aroE 1793614 - 1794480 + | quinate/shikimate dehydrogenase TERM 2229 1795216 - 1795201 - g 91 -5.4 -5.40072 | gap 1 GGTGCGGTAAAAAAA GCCTCTG CGC CAG-GGC AAATCTCGGTAAATG aroD 1794511 - 1795269 + | 3-dehydroquinate dehydratase TERM 2230 1795310 - 1795277 - T 84 -10.4 -3.86312 | overlap 1795309 AGGCATAAGCAATAA TATTTCGGCGGAAA TACCCT CCCCCGCCGAAATA AAAAAAGTATTTTTA S1857 1795854 - 1795351 - | IS1 orfB S1856 1796048 - 1795773 - | IS1 orfA TERM 2231 1797661 - 1797682 + H 82 -11.5 -3.61715 | opp_overlap 1797655, overlap 1797662 ATAACTAAACCTTCA TGCGGCGGA TTTT TCCGCCGCC TTATTGAGCGAGATA TERM 2232 1797662 - 1797681 + H 93 -15 -2.76815 | opp_overlap 1797655, overlap 1797661 TAACTAAACCTTCAT GCGGCGGA TTTT TCCGCCGC CTTATTGAGCGAGAT TERM 2233 1797970 - 1797956 - g 70 -3.6 -4.62783 | overlap 1797957 TATGCAGGCCAAAAA CGTATT TTT AATACA TTACAAACGAATGGC S1859 1797701 - 1798858 + | putative enzyme TERM 2234 1798912 - 1798937 + F 83 -10.5 -3.80841 | opp_overlap 1798911 1798910 1798914 ATGACCTTAACAAGG CACCCGACA TAAATTCC TGTCGGGTG TTTCGTCATCATCAT TERM 2235 1799378 - 1799400 + F 76 -7.6 -4.2586 | GGCAGCTCGTTCTTT GGTTCCCTGC CCT GCTGGGGATC TTTGTATTAATATCC TERM 2236 1802611 - 1802595 - g 78 -7.9 -4.39989 | ATCAAATCAGCAAAA GCAGTCG TAC CGACAGC GCGACTAAAACCACC yddB 1800872 - 1803232 + | hypothetical protein S1862 1804005 - 1803502 - | IS1 orfB S1863 1804199 - 1803924 - | IS1 orfA TERM 2237 1804600 - 1804578 - H 82 -11.2 -3.62572 | opp_overlap 1804591 1804592, overlap 1804579 CATCAGGATGCGAAA TGGCGCACCT CTC AGGCGCGCCG CCCTTTCCTGCTGGC TERM 2238 1804599 - 1804579 - H 87 -14.7 -2.77222 | opp_overlap 1804591 1804592, overlap 1804578 ATCAGGATGCGAAAT GGCGCACCT CTC AGGCGCGCC GCCCTTTCCTGCTGG TERM 2239 1806020 - 1806001 - H 73 -7.8 -4.08767 | overlap 1805987 1805986 TTCAGGCGTTGAAAA CGCTCGAC CAGC GTCCAGCG GAGAAATTCGCCCAG TERM 2240 1806338 - 1806317 - H 85 -6.7 -5.093 | gap 1, opp_overlap 1806321, overlap 1806321 TGTAAAAGAACAAAA TGA-ACCTGT GGC ACAGGTTTCA CAGTGGAAGCGTTAT TERM 2241 1806333 - 1806321 - H 71 -7.7 -3.89307 | opp_overlap 1806321, overlap 1806317 AAAGAACAAAATGAA CCTGT GGC ACAGG TTTCACAGTGGAAGC S1865 1806810 - 1807085 + | IS1 orfA S1866 1807004 - 1807507 + | IS1 orfB TERM 2242 1807661 - 1807625 - f 76 -8.7 -4.18506 | opp_overlap 1807630 1807631 1807660, overlap 1807628 1807631 TTATTGCCAAAATAA TAACAGCCCCGTCAACA CAT CGTTGGCGGGGATTTTA GCAATATTCGCTATT TERM 2243 1807630 - 1807656 + F 83 -10.1 -4.14472 | opp_overlap 1807628 1807625 1807631, overlap 1807631 GCCAAAATAATAACA GCCCCGTCAAC ACATC GTTGGCGGGGA TTTTAGCAATATTCG TERM 2244 1807655 - 1807631 - f 77 -12.1 -2.80636 | opp_overlap 1807630 1807631, overlap 1807628 1807625 CCAAAATAATAACAG CCCCGTCAACA CAT CGTTGGCGGGG ATTTTAGCAATATTC TERM 2245 1807631 - 1807655 + F 85 -13.6 -3.08201 | opp_overlap 1807631 1807628 1807625, overlap 1807630 CCAAAATAATAACAG CCCCGTCAAC ACATC GTTGGCGGGG ATTTTAGCAATATTC TERM 2246 1807660 - 1807674 + F 72 -2.8 -5.01497 | opp_overlap 1807625 CGTTGGCGGGGATTT TAGCAA TAT TCGCTA TTTTTATGTAATAAT TERM 2247 1808714 - 1808728 + G 78 -9.2 -3.86822 | overlap 1808722 GACATGCACATCGAC GCCGCC AGC GGTGGC TTTCTGGCACCGTTC gadB 1807985 - 1809385 + | glutamate decarboxylase isozyme TERM 2248 1809404 - 1809433 + F 82 -11.5 -3.57387 | opp_overlap 1809415 1809419, overlap 1809407 CGTTTAACGGTAACG GTGTCCCGAAACG AACC CGTTTCGGGATAA TTTCCAAAGTCTGTT TERM 2249 1809407 - 1809430 + F 93 -15.4 -2.91322 | opp_overlap 1809415 1809419, overlap 1809404 TTAACGGTAACGGTG TCCCGAAACG AACC CGTTTCGGGA TAATTTCCAAAGTCT TERM 2250 1809499 - 1809471 - f 76 -7.6 -4.30416 | overlap 1809473 ATTAGCAACGGAAAA TATTGTTCTGAA TACGC TTCAGAACAAAA CAGGTGCGGTTCCGA TERM 2251 1809497 - 1809473 - f 83 -10.2 -3.75051 | overlap 1809471 TAGCAACGGAAAATA TTGTTCTGAA TACGC TTCAGAACAA AACAGGTGCGGTTCC TERM 2252 1809674 - 1809691 + G 75 -5.5 -4.67256 | TTTCATTAGTCTTCT TCCTGCT ATTA GGCGGGA TTTTATGGTTTATTC TERM 2253 1810522 - 1810509 - g 71 -3.1 -4.8667 | gap 1, opp_overlap 1810514, overlap 1810510 1810511 CACAGCGCAGAAAAA CCTGCT GCC AGC-GG CATTCGCTAAAATGA xasA 1809541 - 1811076 + | acid sensitivity protein, putative transporter TERM 2254 1811102 - 1811124 + F 100 -13.5 -4.81685 | opp_overlap 1811102 ATGGTTATAAGACAA GGGAGCGAT AATTC ATCGCTCCC TTTTTCGTGCTTGCT TERM 2255 1811124 - 1811102 - f 100 -14.2 -3.75378 | opp_overlap 1811102 ATGGTTATAAGACAA GGGAGCGATA ATT CATCGCTCCC TTTTTCGTGCTTGCT S1869 1811207 - 1812526 + | hypothetical protein TERM 2256 1812541 - 1812581 + F 85 -12.7 -3.34962 | opp_overlap 1812551, overlap 1812542 1812551 AACTACCATGCTTAC TTTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACACC TTGTGAAATATCCCA TERM 2257 1812542 - 1812580 + F 90 -16.2 -2.60763 | opp_overlap 1812551, overlap 1812541 1812551 ACTACCATGCTTACT TTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACAC CTTGTGAAATATCCC TERM 2258 1812571 - 1812551 - f 75 -9.7 -3.62597 | opp_overlap 1812551 1812542 1812541 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 2259 1812551 - 1812571 + F 79 -9.7 -3.66028 | opp_overlap 1812551, overlap 1812542 1812541 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 2260 1812844 - 1812854 + F 74 -6.8 -4.27062 | GCAGTTAGTCGATCT CGCA CGT TGCG TTTCGTTTTGATTCC TERM 2261 1814604 - 1814617 + F 93 -9.5 -4.55798 | GACAAATTCCTCTCG CCCGC ACTC GCGGG TTTTCCTTTAAGGTG TERM 2262 1815647 - 1815657 + G 75 -6.8 -4.41616 | GCACTGGCTGCCGCT CTCG GGC CGAG TTTATTTAACGCCAT S1873 1815194 - 1816090 + | ATP-dependent peptide transporter membrane subunit S1874 1816087 - 1817073 + | putative ATP-binding component of a transport system TERM 2263 1817876 - 1817886 + T 73 -2.4 -5.24129 | opp_overlap 1817866 GGAAACCGCACGTTG CCGC AAG GCTG TTTTTTCTACGAACG TERM 2264 1818032 - 1818005 - T 86 -11.3 -3.67558 | TAGAGATGCTAACAA CGCATCAGGCA TTCACG CGCCTGACGCG TCATCCGGCAATGCT osmC 1818479 - 1818048 - | osmotically inducible protein S1877 1819155 - 1818652 - | IS1 orfB S1878 1819349 - 1819074 - | IS1 orfA TERM 2265 1819440 - 1819419 - H 95 -13.1 -3.82031 | opp_overlap 1819419 CCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTATCTGCTTTA TERM 2266 1819419 - 1819440 + H 100 -13.1 -5.06585 | opp_overlap 1819419 CCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTATCTGCTTTA TERM 2267 1819901 - 1819911 + G 72 -6.8 -4.2074 | overlap 1819894 AGATCTACCGCCGTT CACG CGG CGTG TTTATCTCTTACCAG TERM 2268 1820320 - 1820292 - g 95 -6.8 -5.40072 | gap 1 CTTTGCTCAAAAAAA TGCGAT-GCCGTT ACTT AACCGCTATCGCA ATGAAATTTGTTCTT TERM 2269 1820937 - 1820954 + G 78 -10.5 -3.49048 | overlap 1820935 CAACGCCTTTATTTT CCCGGGC ATCG GCCTGGG TGTTATTGCTTCCGG sfcA 1819537 - 1821234 + | malate dehydrogenase TERM 2270 1821241 - 1821264 + F 70 -8.8 -3.4404 | opp_overlap 1821235, overlap 1821240 1821242 TCCATCTAAGCCTGC ACCCGGTAGT GAAG GCTACCGGGC TATTTCCCTCTCCCT TERM 2271 1821242 - 1821263 + F 78 -12.3 -2.65942 | opp_overlap 1821235, overlap 1821241 1821240 CCATCTAAGCCTGCA CCCGGTAGT GAAG GCTACCGGG CTATTTCCCTCTCCC adhP 1821368 - 1822378 + | alcohol dehydrogenase yddM 1822446 - 1822808 + | hypothetical protein TERM 2272 1823016 - 1822985 - T 86 -13.9 -3.21395 | opp_overlap 1822991, overlap 1822991 ACGTTGTCTACAATA TGAAAATGGCGCC TTTTAC AGCGCCATTTTCA GCTTAAAGTTCAAAA TERM 2273 1823010 - 1822991 - T 77 -7.1 -4.46656 | opp_overlap 1822991, overlap 1822985 TCTACAATATGAAAA TGGCGCC TTTTAC AGCGCCA TTTTCAGCTTAAAGT fdnI 1823689 - 1823036 - | formate dehydrogenase-N subunit gamma TERM 2274 1823550 - 1823500 - G 72 -6.6 -4.26076 | opp_overlap 1823498 1823536, overlap 1823486 1823483 TCAGTGCGACGAAAA TCGCAATGCCGAAGAAGGGGTGCA AAA TGCGTCCCATCTGCGGCGTACCGA AGGTTTGCGTCAGCC fdnH 1824566 - 1823682 - | formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit TERM 2275 1823780 - 1823792 + g 71 -9.1 -3.5394 | opp_overlap 1823775 1823779, overlap 1823789 TGGCAATAAAGCCAG CCGCT GCC AGCGG TTTCAACGCGCCTTT fdnG 1827626 - 1824579 - | formate dehydrogenase-N, nitrate-inducible, alpha subunit TERM 2276 1826611 - 1826636 + g 70 -3.9 -4.60487 | overlap 1826612 1826613 1826632 TCATCGAACTGATAG TTCCAGGACGA TTTG TCGTACTGGCG TTTTTCAGCGTCATA TERM 2277 1826852 - 1826880 + g 90 -7.6 -4.75174 | gap 1 GCGTAAAACGGGGAT CGACAACGAT-CA AGGT TGCATCGTTGTTG TTTTTCGCTTCCATC TERM 2278 1827405 - 1827417 + g 71 -2.6 -5.02074 | overlap 1827396 TTCAATGTGATAAAT CGCT TCTCT GGCG TTTTTTGCGCCATCA yddG 1827858 - 1828739 + | hypothetical protein TERM 2279 1828770 - 1828742 - f 95 -11.7 -4.07687 | opp_overlap 1828745, overlap 1828745 1828746 ACGTCGTGGTTAAAA TAATTGCCGGGTC TAC GGCCCGGCAGTTA ATCAGATAAATTCCG TERM 2280 1828767 - 1828745 - f 79 -9 -4.17048 | opp_overlap 1828745, overlap 1828742 1828746 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 2281 1828745 - 1828767 + F 83 -13.4 -3.1706 | opp_overlap 1828745 1828742 1828746 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 2282 1828766 - 1828746 - f 80 -12.5 -3.09908 | opp_overlap 1828745, overlap 1828745 1828742 CGTGGTTAAAATAAT TGCCGGGTC TAC GGCCCGGCA GTTAATCAGATAAAT S1887 1828994 - 1830094 + | putative outer membrane porin protein TERM 2283 1830108 - 1830127 + F 100 -10.7 -5.00138 | AACGTCCTCTCCTGA CCAGCCC TTCTCT GGGCTGG TTTTTGATTTAAGTG TERM 2284 1831820 - 1831806 - g 71 -2.2 -4.91573 | opp_overlap 1831807, overlap 1831807 AAAACAGAGCAAAAA CTTAAA TTT TTTAAA TGTTTCTGGGAAGAA S1888 1830853 - 1831842 + | putative glycoprotein TERM 2285 1832081 - 1832064 - f 73 -4.1 -4.89729 | TATAAAAGTTAAAAA CATGACC TTAG GGTAATG CTGCCAACTTACTGA S1890 1832130 - 1832405 + | IS1 orfA S1891 1832324 - 1832827 + | IS1 orfB TERM 2286 1834293 - 1834315 + G 72 -8.5 -3.79021 | gap 1 CTGCTGTTCCTTACC TTACCGG-GC ACAG GCTCCGGTAA TTTCATCGCCTTTTA TERM 2287 1834515 - 1834529 + G 85 -2.7 -5.4505 | TTTATCTCAGCCATT GGCGC AGTGG GCGGC TTTTTTATTCCGCAG narU 1833285 - 1834673 + | nitrite extrusion protein 2 TERM 2288 1835041 - 1835022 - f 74 -10.6 -3.27298 | opp_overlap 1835016 CTGCCCAATCATGAA CCTCGCGG CTGC CCGCGTGG CGCAAGTTACTCCTG TERM 2289 1835672 - 1835652 - f 75 -9.7 -3.64703 | overlap 1835655 TGGCTGGCACCGAAA CAAGGCACT GAT AGCGCCCTG GCGATGGCAATGGGG TERM 2290 1835669 - 1835655 - f 71 -7.8 -3.96216 | overlap 1835652 CTGGCACCGAAACAA GGCACT GAT AGCGCC CTGGCGATGGCAATG TERM 2291 1835978 - 1835952 - f 73 -4.5 -4.82901 | gap 1 CGCTGGGGAGAAAAA GGCAAATGGAAT CTGG AATCCATT-GCC GCCGGTACGGAAACC TERM 2292 1839580 - 1839566 - f 73 -10 -3.44284 | opp_overlap 1839565 1839566, overlap 1839564 TTTTGACGAAGAAGA CGCAGA AGT TCTGCG CTTTGATAGTTTTGA TERM 2293 1839566 - 1839580 + F 70 -10 -2.95111 | opp_overlap 1839566 1839564, overlap 1839565 TTTTGACGAAGAAGA CGCAGA AGT TCTGCG CTTTGATAGTTTTGA TERM 2294 1839910 - 1839889 - g 70 -7.2 -4.06419 | opp_overlap 1839886 TGGCTGGAGAAACAA CCGGAAGG GTCAGT CCGTCCGG TGGTAATTGAATCAG TERM 2295 1840235 - 1840220 - g 73 -9 -3.63805 | ATGTGATACTGGAAA TCTGCC ATCA GGCAGA TGTGGAGCCGGGGAT S1896 1839823 - 1841043 + | IS91 orf TERM 2296 1841256 - 1841275 + T 89 -11.4 -4.06903 | opp_overlap 1841251 TGAGTAATTACTTGA TGCCCGGT ATTT GCCGGGCA TTTAATTTAACGATT S1897 1842004 - 1841282 - | putative DNA-binding transcriptional regulator yncB 1843275 - 1842145 - | putative oxidoreductase S1899 1844217 - 1843312 - | insertion element IS2 transposase InsD S1900 1844540 - 1844175 - | insertion sequence 2 OrfA protein S1901 1844699 - 1845217 + | putative resistance protein S1902 1845214 - 1845663 + | hypothetical protein S1903 1845897 - 1845664 - | hypothetical protein S1904 1846231 - 1845983 - | hypothetical protein TERM 2297 1846203 - 1846185 - G 71 -3.1 -4.75472 | gap 1, opp_overlap 1846187 1846188, overlap 1846186 1846187 GCCATATGAATAAAA CGCGCGCA AATA TGCGC-CA TTTTTTGACGTGCAT TERM 2298 1847860 - 1847829 - R 76 -8 -4.32482 | overlap 1847830 1847832 ACTCAGAACCTAAAA CGATAGTGGCCGTC CTAT AACAGCCACTAACA TCTAACTTAATGTTT TERM 2299 1847857 - 1847832 - R 74 -10.5 -3.14977 | overlap 1847830 1847829 CAGAACCTAAAACGA TAGTGGCCGTC CTAT AACAGCCACTA ACATCTAACTTAATG S1905 1849291 - 1847867 - | gamma-aminobutyraldehyde dehydrogenase S1906 1850107 - 1849313 - | putative transport system permease protein TERM 2300 1849696 - 1849683 - G 70 -3.8 -4.68994 | ACCACTACGCAAAAA GTCG CATGAC CGAC CACGATGGTGAAAAA TERM 2301 1850433 - 1850413 - H 75 -9.7 -3.54919 | overlap 1850401 AATGACGGCGGCAAA CGCTCAAGC GCC GCCTGAACG GGCAGGATCATCGAG TERM 2302 1851033 - 1851012 - g 70 -7.2 -4.06419 | opp_overlap 1851009 TGGCTGGAGAAACAA CCGGAAGG GGCAGT CCGTCCGG TGGTAATTGAATCAG TERM 2303 1851358 - 1851343 - g 73 -9 -3.63805 | ATGTGATACTGGAAA TCTGCC ATCA GGCAGA TGTGGAGCCGGGGAT S1908 1850946 - 1851560 + | IS1294 transposase S1909 1851560 - 1852006 + | IS1294 transposase S1910 1852690 - 1852484 - | IS629 orfB S1911 1853105 - 1852746 - | IS629 orfB TERM 2304 1853052 - 1853064 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA S1912 1853694 - 1853368 - | IS629 orfA TERM 2305 1855811 - 1855797 - R 79 -2.7 -5.31275 | CGGGATTAGAAAAAA CAGCC CTGAC GGCAG CATTCACCCGGACGG TERM 2306 1856203 - 1856177 - R 100 -11 -5.69379 | ATACAATTAAAAAAA GACCGAATAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT TERM 2307 1856344 - 1856334 - R 70 -2.4 -5.08088 | AATGGTCAATAAAAA GCGC GGT GCTC ATCAGCTTAAATGTT TERM 2308 1856394 - 1856365 - R 72 -5.1 -4.70879 | gap 2, opp_overlap 1856365 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA TERM 2309 1856365 - 1856394 + r 89 -5.1 -5.7946 | gap 2, opp_overlap 1856365 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA S1915 1856772 - 1856431 - | hypothetical protein TERM 2310 1857638 - 1857628 - R 71 -6.8 -4.02132 | GGTGAAATGGATAAA TCGC AGC GCGA TCCAGGTAAACGCCA S1917 1858035 - 1857661 - | hypothetical protein holE 1858174 - 1858404 + | DNA polymerase III subunit theta S1919 1858737 - 1859162 + | hypothetical protein TERM 2311 1859225 - 1859211 - g 70 -7.1 -4.1399 | overlap 1859207 TTATCGATACAGAAA CCTGC GGTTT GCAGG GAGGGATCGTTGAGA S1920 1859186 - 1859848 + | exodeoxyribonuclease X ptrB 1861905 - 1859845 - | protease 2 TERM 2312 1861139 - 1861123 - G 71 -2.2 -4.96501 | gap 1, opp_overlap 1861124, overlap 1861124 CGGCAGAAAAACAAA CGGCTCG GCAT CG-GCCA TTTCCGCGTCCAGCA TERM 2313 1861541 - 1861531 - G 75 -5.4 -4.67982 | opp_overlap 1861539 GCCCATCGAATAAAA CTCA CTA TGAG CTGCGCGCTTGTTGG yebE 1862774 - 1862115 - | hypothetical protein TERM 2314 1862521 - 1862533 + g 74 -3.3 -4.88684 | overlap 1862521 TGCGGTTCGTCCTGA TGCGC CGC GCGAA TTTTATCTTTGTATT yebF 1863457 - 1863101 - | hypothetical protein TERM 2315 1863284 - 1863296 + g 75 -4.7 -4.73613 | overlap 1863285 TTGATCATCTGCCCA GCGCG CCA CGCGA TTTTGTTGATAATCA TERM 2316 1863603 - 1863619 + H 73 -2.1 -5.18726 | opp_overlap 1863604 1863605, overlap 1863605 TTGCCGGTTTTCAGA ATGGTGC TCA GCACCTC TTTTTGTTCTGCCAG TERM 2317 1863605 - 1863617 + H 83 -9.1 -4.22377 | opp_overlap 1863605 1863604, overlap 1863603 GCCGGTTTTCAGAAT GGTGC TCA GCACC TCTTTTTGTTCTGCC purT 1863948 - 1865126 + | phosphoribosylglycinamide formyltransferase 2 TERM 2318 1865180 - 1865141 - T 79 -3.1 -5.41746 | gap 3, opp_overlap 1865152, overlap 1865152 AACCCGGCAAAAAAA CGCTACAAAAATGCCCGATC CTA GATCGGGCATTTT-G-A-CT TTTACAGCTTAGCGC TERM 2319 1865172 - 1865152 - T 100 -15.5 -4.90296 | opp_overlap 1865152, overlap 1865141 AAAACGCTACAAAAA TGCCCGATC CTA GATCGGGCA TTTTGACTTTTACAG TERM 2320 1865152 - 1865172 + T 100 -15.5 -4.4267 | opp_overlap 1865152 1865141 AAAACGCTACAAAAA TGCCCGATC CTA GATCGGGCA TTTTGACTTTTACAG eda 1865823 - 1865182 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2321 1865778 - 1865766 - G 71 -9.1 -3.44051 | opp_overlap 1865774 1865775, overlap 1865775 TTTTTACCACGATAA CCGGT ACA ACCGG GCCGGTGGTCAGGAT TERM 2322 1865884 - 1865901 + r 82 -7.7 -4.56597 | GATACAGGTTGCGCC CTGTTCG GCAC CGGACAG TTTTTCACGCAAGGC edd 1867671 - 1865860 - | phosphogluconate dehydratase TERM 2323 1867486 - 1867500 + g 71 -2.8 -4.7878 | overlap 1867492 ATTGTTACGCAACAT GCTTTT CAA AGAGGC TTTGTTTTCTGGCTG TERM 2324 1867492 - 1867504 + g 72 -6.3 -4.42386 | overlap 1867486 ACGCAACATGCTTTT CAAAG AGG CTTTG TTTTCTGGCTGGCAG TERM 2325 1867826 - 1867801 - R 100 -11.2 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGTG-GG TGAAT CCGCACGAGGC CTGAAAGTGTAAAAA zwf 1869381 - 1867906 - | glucose-6-phosphate 1-dehydrogenase TERM 2326 1869341 - 1869307 - G 89 -13.6 -3.22388 | overlap 1869311 CAGGGAAGGCAGCAA TTTACGACGCGCAAGG TCG CCTTTCGCGCCGAAAA TGACCAGGTCACAGG TERM 2327 1869337 - 1869311 - G 90 -14.4 -2.57721 | overlap 1869307 GAAGGCAGCAATTTA CGACGCGCAAGG TCG CCTTTCGCGCCG AAAATGACCAGGTCA TERM 2328 1869529 - 1869515 - H 71 -7 -4.15565 | overlap 1869516 GCGATTACGGGAAAA GCGCGC AAA GCGCGG CAAAACTGATAAAAA TERM 2329 1869528 - 1869516 - H 73 -10.5 -3.09018 | overlap 1869515 CGATTACGGGAAAAG CGCGC AAA GCGCG GCAAAACTGATAAAA TERM 2330 1869753 - 1869738 - g 81 -4.7 -5.02476 | overlap 1869727 ATATGCTGGAAAAAA TCCAG TCTCAG CTGGA ACATTTGAGCAAATC yebK 1869719 - 1870540 + | DNA-binding transcriptional regulator HexR TERM 2331 1870603 - 1870577 - f 79 -11.6 -3.19371 | opp_overlap 1870577, overlap 1870563 1870593 AGTTACTTAATTTAA GTGACGATCGCT AAA AGCGACTGTCAC TGTCCTAATCTTATA TERM 2332 1870577 - 1870603 + F 77 -11.6 -2.87146 | opp_overlap 1870563 1870577 1870593 AGTTACTTAATTTAA GTGACGATCGCT AAA AGCGACTGTCAC TGTCCTAATCTTATA TERM 2333 1871056 - 1871045 - g 95 -5.8 -5.38054 | GGCGACAAAGAAAAA GTCG GTAT CGAC TACAAAGGCCTGCCT pykA 1870718 - 1872160 + | pyruvate kinase TERM 2334 1872167 - 1872198 + T 93 -15.8 -2.92668 | opp_overlap 1872164 1872162 1872161, overlap 1872164 GTAGAGTAAGTACGT TGCCGGATGCGGCG AAAA CGCCACATCCGGCC TATAGTTCAATGATA TERM 2335 1872268 - 1872286 + T 100 -10.3 -5.68438 | TATCATCAGGCGAAG GCCTCTC CTCGC GAGAGGC TTTTTTATTTGATGG msbB 1873262 - 1872291 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2336 1872773 - 1872761 - G 79 -4.7 -4.9755 | opp_overlap 1872761 AGACATAATCAAAAA CCGGG TTG CCCTG ATTATGGAACATCGC TERM 2337 1873365 - 1873343 - R 100 -10.6 -5.99154 | CACCAAATAAAAAAA GCCGGTAC TGACTGC GTACCGGC TGCGAATGGATGTTA yebA 1874704 - 1873382 - | hypothetical protein TERM 2338 1874083 - 1874099 + g 81 -10.1 -3.87815 | opp_overlap 1874094, overlap 1874070 CTGCGCTCACTTCGG CGCTGGT TAA ACCGGCG TTTCTGGCGCTGGCA znuA 1875652 - 1874720 - | high-affinity zinc transporter periplasmic component TERM 2339 1874996 - 1875007 + g 72 -4.4 -4.59773 | ATGACCAAGCGGTGT CAGT CCGA ACTG TTTTTCGAAATAGCC TERM 2340 1875248 - 1875261 + g 77 -3.1 -5.03715 | overlap 1875237 1875246 GAAATCGCCGTGATG GTGAT CTTC GTCAC TTTTTTCCGCGTGGT TERM 2341 1875361 - 1875379 + g 75 -5.3 -4.65895 | TTACCTGCTTCGCTT CTGGTAA TTTGC TTACCGG TTTTTGCATAAACGC znuC 1875731 - 1876486 + | high-affinity zinc transporter ATPase znuB 1876483 - 1877268 + | high-affinity zinc transporter membrane component ruvB 1878425 - 1877415 - | Holliday junction DNA helicase B ruvA 1879045 - 1878434 - | Holliday junction DNA helicase motor protein TERM 2342 1879114 - 1879095 - R 93 -6.4 -5.67063 | overlap 1879096 TGTATGATAAAAAAA TGCTGGAT AGAT ATCCAGCG AAGGATGAAGAAAAC TERM 2343 1879113 - 1879096 - R 80 -9.9 -3.99153 | overlap 1879095 GTATGATAAAAAAAT GCTGGAT AGAT ATCCAGC GAAGGATGAAGAAAA TERM 2344 1879601 - 1879589 - R 81 -3.4 -5.35721 | ACAGAACAACAAAAA CAAC GAATT GTTG AACAGGTTCCCTCCC TERM 2345 1879915 - 1879890 - R 79 -10.4 -3.61178 | opp_overlap 1879906 CGGAGGGAGTTGAAA CGCCTCAGCC GGAACT GACCGAGGCG GTATAACTTAACGCA ruvC 1880444 - 1879923 - | Holliday junction resolvase TERM 2346 1880057 - 1880086 + g 86 -7.1 -5.02074 | opp_overlap 1880061 TAGCGGGCAGTTTCA GCAAGGTGCGG ACCATATG CTGCACCTGGC TTTTTTCGGCACTAC yebC 1881219 - 1880479 - | hypothetical protein ntpA 1881730 - 1881248 - | dATP pyrophosphohydrolase aspS 1883590 - 1881818 - | aspartyl-tRNA synthetase TERM 2347 1884509 - 1884484 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 1884492, overlap 1884485 1884499 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 2348 1885489 - 1885517 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA S1944 1884346 - 1885542 + | ISSfl4 orf S1946 1886271 - 1886519 + | hypothetical protein TERM 2349 1886724 - 1886709 - f 72 -6.1 -4.26076 | GCAGTCTCAGCAAAA CACCG ACCAGA CGGTG AGAAGACAAAAAGAT ipaH_4 1887119 - 1888870 + | invasion plasmid antigen S1948 1889050 - 1888871 - | hypothetical protein TERM 2350 1888935 - 1888912 - G 93 -10.2 -4.58395 | opp_overlap 1888924 1888925, overlap 1888914 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 2351 1888933 - 1888914 - G 100 -15 -3.90762 | opp_overlap 1888924 1888925, overlap 1888912 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT TERM 2352 1888936 - 1888947 + g 70 -5.8 -4.2074 | overlap 1888925 1888924 GCCCCCGGGCCTCCC CGGA TTCA TCCG TTTCTCTGTTCAGCC S1949 1889673 - 1889050 - | hypothetical protein TERM 2353 1889837 - 1889825 - H 72 -9.1 -3.62046 | CGATCCGGGCAACAA CAGCC CCA GGCTG TAACGCCTGCTTAGC TERM 2354 1890177 - 1890204 + H 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG TERM 2355 1890502 - 1890512 + H 74 -5.4 -4.56597 | TGAAATTGTAGTCCA TGAG ATA CTCA TTTTTACAGGAGGGG TERM 2356 1890855 - 1890865 + H 80 -5.4 -4.93547 | CACAGCGCGATCAAC CTCA GCC TGAG TTTTTGCTTCATTGA TERM 2357 1891504 - 1891517 + G 100 -5.2 -5.64274 | TACTGGAGCGCATAG CCGC GCTGAA GCGG TTTTTTTATGCGTAA TERM 2358 1891865 - 1891846 - g 70 -10 -3.18274 | CTCACCTGAATTTAA CGCCCTCA ATTT TGAGGACG TCACCTACACCGACA S1950 1891397 - 1891939 + | hypothetical protein TERM 2359 1892147 - 1892161 + F 72 -5.7 -4.52589 | GCACTGGTCTGTACC CTGGA TACTT TCCAG TTTTATCTGGAAAAA S1952 1892281 - 1892691 + | insertion sequence 2 OrfA protein S1953 1892649 - 1893554 + | insertion element IS2 transposase InsD TERM 2360 1893798 - 1893779 - f 76 -5 -4.91109 | GCCTGACTACAAAAA CATGCATT TCTG ACTGCATG ATTAAAGTCTTCCTC TERM 2361 1894335 - 1894322 - g 100 -3.1 -5.93809 | gap 1 CCCGCAGAAAAAAAA GCC-GA ATT TCTGGC AACTCTGATTGCAAT S1954 1894097 - 1894372 + | hypothetical protein TERM 2362 1894405 - 1894379 - f 91 -7.2 -5.49809 | overlap 1894383 GAAATCTGAAAAAAA GAAAGCCTGCAC ACT GTGCAGGCCTGA ATGAAGAACCTGGGA TERM 2363 1894401 - 1894383 - f 100 -14.6 -5.20328 | overlap 1894379 TCTGAAAAAAAGAAA GCCTGCAC ACT GTGCAGGC CTGAATGAAGAACCT TERM 2364 1895689 - 1895673 - g 88 -2.2 -5.52023 | gap 1, overlap 1895674 1895677 ATGATGAAGAAAAAA CGCAGCC ATCT GGC-GCA ATGGCAGATGAACAG S1955 1894472 - 1895896 + | putative exodeoxyribonuclease VIII TERM 2365 1897289 - 1897274 - g 70 -4 -4.60487 | gap 1, opp_overlap 1897274 GACGACCTGGAAAAA GGT-CTG CCT CAGCACC TGTTTGAATCGCTCT S1957 1897139 - 1897459 + | putative host-nuclease inhibitor protein Gam S1958 1897519 - 1898562 + | putative bacteriophage protein S1959 1898637 - 1898963 + | IS629 orfA TERM 2366 1899279 - 1899267 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC S1960 1899199 - 1899846 + | IS629 orfB S1961 1900753 - 1900250 - | IS1 orfB S1962 1900947 - 1900672 - | IS1 orfA TERM 2367 1901223 - 1901210 - g 71 -3.1 -4.85782 | gap 1, opp_overlap 1901222, overlap 1901211 1901212 TCCCCCAAAAACAAA TGCCGG GAT CCGG-A CGGTAGCATTACTGC S1963 1901037 - 1901642 + | putative integrase for prophage CP-933R TERM 2368 1902023 - 1902038 + F 79 -7.6 -4.4522 | opp_overlap 1902023, overlap 1902008 GGTTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG TERM 2369 1902038 - 1902023 - f 79 -7.6 -4.4009 | opp_overlap 1902008 1902023 GGTTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG sitA 1902098 - 1902988 + | Iron transport protein sitB 1902988 - 1903815 + | Iron transport protein, ATP-binding component sitC 1903812 - 1904669 + | Iron transport protein sitD 1904666 - 1905523 + | Iron transport protein, inner membrane component TERM 2370 1905717 - 1905685 - T 73 -10.6 -3.10012 | gap 1, opp_overlap 1905684 1905685 AAGTTTACCAGCCAA CCGCGGCACGTTCCT GCAT ACGA-CGTGCCGCAG CTTCTGTTATTCCAC S1968 1906287 - 1905724 - | hypothetical protein S1969 1907566 - 1906298 - | putative tail fiber protein TERM 2371 1907608 - 1907590 - R 73 -7.4 -4.13995 | overlap 1907593 TCGCGATAAATTAAA TCAGGAAG AAC CTTCCGGA GAGGCGGGCCATTCA S1970 1908078 - 1907590 - | putative tail fiber assembly protein S1971 1908341 - 1908138 - | hypothetical protein S1972 1909271 - 1908558 - | IS600 orfB S1973 1909688 - 1909479 - | IS1 orfB S1975 1910176 - 1909901 - | IS1 orfA S1978 1911391 - 1910765 - | IS911 orfB TERM 2372 1911173 - 1911184 + g 77 -5.8 -4.63218 | opp_overlap 1911169 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S1980 1911933 - 1911631 - | IS911 orfA S1981 1914238 - 1912634 - | putative integrase TERM 2373 1914768 - 1914758 - R 100 -8.2 -5.64274 | opp_overlap 1914758 1914761 TCAGGCATAAAAAAA CCGC TCG GCGG CGGGTTTTGCTTACT S1986 1915528 - 1914839 - | putative Q antiterminator encoded by prophage CP-933P TERM 2374 1915364 - 1915389 + g 100 -8.3 -5.42862 | gap 1 CCGCGTTATCATTTT TCCGGTCACCTC ATC GCGGT-ACCGGA TTTTTTTACGCCTGT S1987 1915884 - 1915525 - | putative crossover junction endodeoxyribonuclease S1989 1916531 - 1917244 + | IS600 orfB S1990 1917742 - 1918569 + | putative serine protease S1991 1918613 - 1919362 + | hypothetical protein S1992 1919359 - 1919928 + | hypothetical protein S1994 1920052 - 1920294 + | hypothetical protein S1995 1920298 - 1920444 + | putative bacteriophage protein TERM 2375 1921033 - 1921044 + T 74 -5.8 -4.63218 | opp_overlap 1921029 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S1998 1921793 - 1921491 - | IS911 orfA TERM 2376 1922239 - 1922215 - H 73 -10 -3.31915 | opp_overlap 1922215 1922214, overlap 1922213 1922212 TGGTTACAAAAATTA GCGCAGTGGC ATCAG ACCACTACGC CTTATCTTTTTTTAC yecN 1922426 - 1922821 + | hypothetical protein yecO 1922862 - 1923605 + | hypothetical protein yecP 1923602 - 1924573 + | putative enzyme TERM 2377 1924708 - 1924729 + T 77 -11.5 -3.28745 | opp_overlap 1924706 1924705, overlap 1924710 ACGTTTGCATAACCT CAGCGCCCG TTTC CGGGCGCTA TTCACTTCTTACGCC TERM 2378 1924710 - 1924727 + T 86 -14.1 -3.20751 | opp_overlap 1924706 1924705, overlap 1924708 GTTTGCATAACCTCA GCGCCCG TTTC CGGGCGC TATTCACTTCTTACG bisZ 1927167 - 1924738 - | biotin sulfoxide reductase 2 TERM 2379 1926431 - 1926444 + g 74 -2.3 -5.06451 | opp_overlap 1926423 1926432, overlap 1926423 1926432 GGATCAATGGCAATC ACTGG TTTG CCAGA TTTTTTCAGCTGATG TERM 2380 1927119 - 1927135 + g 71 -9.4 -3.48105 | overlap 1927118 TCACCACCAGCGCTC CAGCGG CAATA CCGCTG TGTTTAATAAATTCA yecK 1928292 - 1927192 - | putative cytochrome C-type protein TERM 2381 1928632 - 1928608 - R 100 -10 -5.64274 | TCAGGGATAAAAAAA GGCCCCTG TTGAAATTG CAGGGGCC TGGTACGAGCAAGCA cutC 1929120 - 1928680 - | copper homeostasis protein yecM 1930006 - 1929440 - | hypothetical protein TERM 2382 1929837 - 1929857 + g 72 -6.7 -4.25104 | opp_overlap 1929811 1929831 TGTTCAAAACCGCGA CGCCAGCGC TCA GCGGTGACG TTTTGATGGCAACGC TERM 2383 1930181 - 1930199 + H 77 -11 -3.20382 | ATTTCTTTAACTGGT GCGGGCAA TTT TTGCTCGC TTCATCAATGTAAGG TERM 2384 1931542 - 1931532 - g 70 -4.6 -4.57569 | overlap 1931514 GGATCTCTCCAAAAA CCGC ACC ACGG ACTACATCTTCGACT argS 1930222 - 1931955 + | arginyl-tRNA synthetase TERM 2385 1932002 - 1931977 - T 77 -11.2 -3.12351 | opp_overlap 1931977 TTTCGTGAGAGTGAA GCCTGATCAG GGTTAG CCGATCAGGC TTTTTTATTGCCATC TERM 2386 1931977 - 1932002 + T 100 -9.8 -5.46657 | gap 1, opp_overlap 1931977 TTTCGTGAGAGTGAA GCCTGATCAGG GTTAG CC-GATCAGGC TTTTTTATTGCCATC S2009 1933274 - 1932840 - | IS629 orfB TERM 2387 1933393 - 1933405 + r 72 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA S2011 1934035 - 1933709 - | IS629 orfA flhE 1934425 - 1934087 - | flagellar protein flhB 1937642 - 1936449 - | flagellar biosynthesis protein FlhB TERM 2388 1936546 - 1936526 - G 72 -4.6 -4.63218 | TTCTCGTTAATAAAA TCCAGGGC TGCCG GCACCGGA AGATGAGTAGGTGTA TERM 2389 1936973 - 1936989 + g 84 -7.9 -4.62783 | CATCACGAATATCCT GCCGCGA CAT TCGCAGC TTTTTCAGGTGGCTG TERM 2390 1937559 - 1937585 + g 71 -2.2 -4.9218 | overlap 1937560 GGTCAGTTCACGGGA ACGCGGGA TTTGCCCCTCT TCCCGCGC TTTTTCTAGTCGGTG S2015 1937878 - 1938336 + | hypothetical protein TERM 2391 1938668 - 1938679 + T 74 -5.8 -4.63218 | opp_overlap 1938664 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S2018 1939428 - 1939126 - | IS911 orfA TERM 2392 1939647 - 1939672 + G 76 -12.7 -2.51547 | opp_overlap 1939647, overlap 1939646 1939644 1939667 1939668 GATGAGCATAAGAAA GCCAGAGTATT ACTT GATACTCTGGC CTGTTCCTGTCCGGC TERM 2393 1939672 - 1939647 - g 95 -12 -4.36554 | opp_overlap 1939646 1939644 1939647 1939667 1939668 GATGAGCATAAGAAA GCCAGAGTAT TACTTG ATACTCTGGC CTGTTCCTGTCCGGC TERM 2394 1939677 - 1939692 + G 70 -4.7 -4.57569 | overlap 1939668 1939667 GATACTCTGGCCTGT TCCTG TCCGGC CAGGA TTTTTGGCGGGATGG S2019 1939569 - 1939964 + | hypothetical protein S2020 1940459 - 1941172 + | IS600 orfB cheZ 1942321 - 1941677 - | chemotaxis regulator CheZ cheY 1942721 - 1942332 - | chemotaxis regulatory protein CheY cheB 1943785 - 1942736 - | chemotaxis-specific methylesterase cheR 1944648 - 1943788 - | chemotaxis methyltransferase CheR tap 1946268 - 1944667 - | methyl-accepting protein IV TERM 2395 1945270 - 1945285 + g 74 -2.4 -5.055 | overlap 1945264 1945267 1945271 AACACCGCCCGCCTG CGCCGT TGTC GCGGCA TTTTTTGCCAGTTCC TERM 2396 1945879 - 1945898 + g 74 -6.4 -4.46757 | overlap 1945889 CTGATGTTCGAGATC GTTGTGCC AGCG GGCAAAAC TTTTCTCCGTCTCTT tar 1947975 - 1946314 - | methyl-accepting chemotaxis protein II, aspartate sensor receptor TERM 2397 1947220 - 1947197 - G 73 -9.6 -3.64822 | ACGGTGTCAGTCAAA GAGCGTTGCA TATG TGAAACGCTC TGCGCCAGGTCACCC TERM 2398 1948091 - 1948071 - R 100 -8.3 -5.67283 | opp_overlap 1948067 1948071 AATTGAAATAAAAAA CCCGATG CGCAGAT CATCGGG TTCATTTCAATTGAG cheW 1948623 - 1948120 - | purine-binding chemotaxis protein TERM 2399 1948166 - 1948176 + g 71 -3.2 -4.74706 | opp_overlap 1948150 AGCGCCATCTCTTCG CTGT TCA GCAG TTTTTCGATGTTCAC cheA 1950608 - 1948644 - | chemotaxis protein CheA TERM 2400 1948833 - 1948849 + g 72 -7.9 -3.89346 | opp_overlap 1948830 1948831 ATCCACCAGCAAGGC GTAGCGG CGA CCGCCAC TTTGTAAGATCACCA TERM 2401 1950199 - 1950221 + g 76 -11.2 -3.41527 | overlap 1950205 CTTAATCGGGTCACT GCGGATGGCG TTT CGCCTTTCGC TTCTAATGCCAGTTG TERM 2402 1950205 - 1950215 + g 72 -8.2 -3.82083 | overlap 1950199 CGGGTCACTGCGGAT GGCG TTT CGCC TTTCGCTTCTAATGC motB 1951539 - 1950613 - | flagellar motor protein MotB TERM 2403 1950651 - 1950669 + g 93 -8.8 -4.83169 | TTGTGGGAACACTGA CCTGTGGT GCA ACCTCAGG TTTTTCTAGGGCGCT motA 1952423 - 1951536 - | flagellar motor protein MotA TERM 2404 1952239 - 1952258 + g 72 -8.6 -3.82097 | gap 1, opp_overlap 1952239 1952238 CGACGAAACAGCAAC GGCAGCGCT TTC AGCG-TGCC TTTAATCGCTTTGCC TERM 2405 1952523 - 1952500 - R 100 -12.5 -6.06723 | TTGGGGAAAAAAAAA GCAGCGGTA CGTCGT TACCGCTGC TGGAATGTTGCGCCA flhC 1953128 - 1952550 - | transcriptional activator FlhC S2033 1953391 - 1953666 + | IS1 orfA S2034 1953585 - 1954088 + | IS1 orfB otsB 1955326 - 1954526 - | trehalose-6-phosphate phosphatase TERM 2406 1954760 - 1954747 - G 71 -9.5 -3.5241 | overlap 1954734 1954745 CATCGCCCAGAAATA CGGGC GTTC GCCCG ATAAAAGGAGCTTCC TERM 2407 1955454 - 1955429 - R 93 -12.6 -3.81414 | opp_overlap 1955431 ATTTGCAACGAAGAA CAGCCAACCG TTGTGG CGGCTGGCTG TGGTGGGAAAAAACG araH 1956482 - 1955493 - | L-arabinose transporter permease protein araG 1958008 - 1956494 - | L-arabinose transporter ATP-binding protein TERM 2408 1958038 - 1958064 + H 93 -10.8 -4.57341 | overlap 1958039 1958040 TCACTGGTCGTTCAC ACCCCCTCTGCA TCA TGCAGAGGGGAA TTTTTCCGGCAAATT TERM 2409 1958039 - 1958063 + H 93 -14.3 -3.33922 | overlap 1958038 1958040 CACTGGTCGTTCACA CCCCCTCTGCA TCA TGCAGAGGGGA ATTTTTCCGGCAAAT TERM 2410 1958040 - 1958062 + H 100 -17.8 -2.60032 | overlap 1958039 1958038 ACTGGTCGTTCACAC CCCCTCTGCA TCA TGCAGAGGGG AATTTTTCCGGCAAA TERM 2411 1959121 - 1959109 - H 78 -6.3 -4.62069 | opp_overlap 1959109 TGTGTAGGGCAAAAA CGAAT GAC ATTCG TTAAATTAATCGGAA TERM 2412 1960265 - 1960242 - g 70 -5.2 -4.41633 | GATCTGGAAAAAGAA CAGCAGCATG ATGG CCTGTTGCTG CAAACCATTCTTGAT yecI 1959864 - 1960367 + | ferritin-like protein TERM 2413 1960370 - 1960402 + F 78 -6.2 -4.56597 | opp_overlap 1960373 1960375, overlap 1960371 CCAGCTGCATTGATC ATACATCGGCGCTA ATACA TTGCGCCGATGAAG TTTTTGAGAAACCGC TERM 2414 1960371 - 1960401 + F 73 -9.7 -3.33744 | opp_overlap 1960373 1960375, overlap 1960370 CAGCTGCATTGATCA TACATCGGCGCTA ATACA TTGCGCCGATGAA GTTTTTGAGAAACCG TERM 2415 1960399 - 1960373 - f 79 -12.3 -2.80816 | opp_overlap 1960371 1960370, overlap 1960375 GCTGCATTGATCATA CATCGGCGCTA ATACA TTGCGCCGATG AAGTTTTTGAGAAAC TERM 2416 1960441 - 1960414 - f 95 -13.5 -3.86822 | opp_overlap 1960414 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTGTT TGAAGCAGCGG TTTTTTTAATGGGAT TERM 2417 1960414 - 1960441 + F 100 -11.3 -5.52986 | opp_overlap 1960414 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTGTT TGAAGCAGCGG TTTTTTTAATGGGAT TERM 2418 1960785 - 1960812 + F 73 -10 -3.30007 | opp_overlap 1960784 1960792, overlap 1960792 CCGTCATCAGGACAC AAAAAAACCTGC CGGA GCAGGTTTTTTG TTATCGGAACATATT TERM 2419 1960792 - 1960805 + F 100 -8.1 -5.55769 | opp_overlap 1960784 1960792, overlap 1960785 CAGGACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 2420 1960805 - 1960792 - f 100 -8.1 -5.74122 | opp_overlap 1960792 1960785, overlap 1960784 CAGGACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 2421 1961079 - 1961091 + F 72 -9.1 -3.64488 | opp_overlap 1961078 1961076 1961066 1961079, overlap 1961078 GATGGCAAGAAATAG CGCCT GCC AGGCG TCTTTTCCGGCCATT S2043 1961162 - 1961485 + | hypothetical protein TERM 2422 1961522 - 1961489 - f 73 -9.7 -3.34398 | opp_overlap 1961498, overlap 1961487 1961490 GTCTTTCTCTAAATA TTTTAATCAGCGAGG GGAT CTTCGCTGATTAAAG AAATAGCGGTAATGC TERM 2423 1961521 - 1961490 - f 81 -13.2 -2.60496 | opp_overlap 1961498, overlap 1961489 1961487 TCTTTCTCTAAATAT TTTAATCAGCGAGG GGAT CTTCGCTGATTAAA GAAATAGCGGTAATG ftn 1961656 - 1962153 + | ferritin TERM 2424 1962161 - 1962182 + T 100 -17.3 -3.61178 | opp_overlap 1962150, overlap 1962160 AAAACTAATGCTCTC CGGCGGCAG GTTT CTGCCGCCG TTTCAAATCAGTGAC yecH 1962429 - 1962190 - | hypothetical protein TERM 2425 1962240 - 1962227 - G 77 -6.7 -4.57569 | opp_overlap 1962225 TGATCGGTCGAAAAA CCTTC TTCT GAAGG TATAAATTTGCCTTT TERM 2426 1963580 - 1963590 + G 72 -8.2 -3.7229 | overlap 1963578 CAATTACCTTTCTGC CGCC GTT GGCG TTTGCACTGTTTTAT tyrP 1962619 - 1963830 + | tyrosine-specific transport protein yecA 1964557 - 1963892 - | hypothetical protein TERM 2427 1964611 - 1964623 + r 78 -6.3 -4.69027 | CTTACATGCCGGTCC GTATC AGA GATAC TTTTTGAGTGGCTTT TERM 2428 1964706 - 1964693 - R 100 -8.1 -5.64274 | opp_overlap 1964693 GCAGGCACAAAAAAA CCACC CGAA GGTGG TTTCACGACACTGCT TERM 2429 1964794 - 1964814 + r 72 -10.5 -2.89742 | overlap 1964797 GCACAGCGCGAACGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2430 1964949 - 1964971 + r 73 -7.7 -4.13767 | CAGGCCTTTCAGCCA GACATCCGC TTGAC GCCGATGTC TTTTAAACTGGAGCG TERM 2431 1965013 - 1965029 + r 73 -10.9 -2.62616 | opp_overlap 1964992 TCGAACTCGAGACCT CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 1965755 - 1965207 - | phosphatidylglycerophosphate synthetase uvrC 1967644 - 1965812 - | excinuclease ABC subunit C uvrY 1968297 - 1967641 - | response regulator TERM 2432 1968547 - 1968536 - H 73 -4.4 -4.80167 | CAGCAAAAATGAAAA TCAG CCCG CTGA ATATGTAACATTAAT TERM 2433 1968908 - 1968897 - g 81 -5.8 -4.77986 | TTAAAGATGGAAAAA CAGC TTGC GCTG ATCGAAGACGAAACC yecF 1968756 - 1968980 + | hypothetical protein TERM 2434 1969014 - 1968988 - T 100 -12.3 -4.70583 | opp_overlap 1968988 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTATTGACAAAATCA TERM 2435 1968988 - 1969014 + T 95 -14.5 -3.62046 | opp_overlap 1968988 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTATTGACAAAATCA sdiA 1969633 - 1969007 - | transcriptional regulator of ftsQAZ gene cluster TERM 2436 1969822 - 1969852 + r 89 -5.3 -5.70522 | gap 1, opp_overlap 1969817 1969816, overlap 1969823 1969825 CGCTTGAAATGGCGT CCCGCCCCGACAGG TGAA TC-GTCGGGGCTGA TTTTTTCTTATTATT TERM 2437 1969823 - 1969851 + r 77 -8.8 -3.98653 | gap 1, opp_overlap 1969817 1969816, overlap 1969822 1969825 GCTTGAAATGGCGTC CCGCCCCGACAGG TGAA TC-GTCGGGGCTG ATTTTTTCTTATTAT TERM 2438 1969825 - 1969849 + r 75 -10 -3.54636 | gap 1, opp_overlap 1969817 1969816, overlap 1969823 1969822 TTGAAATGGCGTCCC GCCCCGACAGG TGAA TC-GTCGGGGC TGATTTTTTCTTATT yecC 1970615 - 1969863 - | putative amino-acid ABC transporter ATP-binding protein YecC yecS 1971280 - 1970612 - | putative transport system permease protein (former yecC) TERM 2439 1970837 - 1970825 - G 72 -7.7 -3.95787 | TACCAGACTGATAAA GCTGT TCG ACAGC GGCGGCAACGCCACC TERM 2440 1971129 - 1971114 - G 81 -4.6 -5.08178 | overlap 1971115 ATAGAGATATAAAAA CGCGCC AGCC AGCGCA CGGGCCAGATTGGCG yedO 1972281 - 1971295 - | D-cysteine desulfhydrase TERM 2441 1972347 - 1972366 + r 84 -4.9 -5.39755 | opp_overlap 1972348, overlap 1972348 ACGCGTAAATAAAAA AGGCGCT AGTGAA AGCGCCC TTTTTTGTCATTATG TERM 2442 1972365 - 1972348 - R 100 -8.4 -5.63517 | opp_overlap 1972348 1972347 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT TERM 2443 1972348 - 1972365 + r 72 -8.4 -3.82226 | opp_overlap 1972348, overlap 1972347 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT TERM 2444 1972550 - 1972564 + r 82 -7.8 -4.63486 | CTTCACCGGTTACTG CCAGCG TAT CGTTGG TTTTCTTCACCAGAT TERM 2445 1972711 - 1972734 + r 73 -2.3 -5.22039 | CAGCCACTCTTCATA GTTGGTGCC CAGACC GACACCCAC TTTTTTGCCTTTCAG fliZ 1973862 - 1973275 - | protein FliZ TERM 2446 1974548 - 1974536 - R 72 -9.1 -3.49653 | opp_overlap 1974535 1974534 ACCAGCGGGACATAA CGCTG CCA CAGCG AGTGTTTATCCATTA TERM 2447 1974719 - 1974735 + r 100 -15.1 -3.54459 | opp_overlap 1974719 GCCGAATGTAAAAAA CCCCGCC GGT GGCGGGG TTTGAGAGGCATTCA TERM 2448 1974735 - 1974719 - R 100 -15.1 -5.15969 | opp_overlap 1974719 GCCGAATGTAAAAAA CCCCGCC GGT GGCGGGG TTTGAGAGGCATTCA fliC 1976408 - 1974756 - | flagellin fliD 1976674 - 1978080 + | flagellar capping protein fliS 1978105 - 1978515 + | flagellar protein FliS fliT 1978515 - 1978880 + | flagellar biosynthesis protein FliT amyA 1978958 - 1980445 + | cytoplasmic alpha-amylase TERM 2449 1980450 - 1980472 + T 72 -10.5 -2.93853 | opp_overlap 1980448 1980447 1980451, overlap 1980449 AGGTGATTTAAATCC ATCCCCGGC GGCAA GCCGGGGAG ATTTCATTACGGCAG TERM 2450 1980471 - 1980451 - T 83 -14 -2.66272 | opp_overlap 1980450 1980449, overlap 1980448 1980447 GGTGATTTAAATCCA TCCCCGGC GGCAA GCCGGGGA GATTTCATTACGGCA TERM 2451 1980490 - 1980505 + T 74 -8.2 -3.85698 | TTCATTACGGCAGTG GCGTCG GTAA CGGCGC TTTATCCAGCGCGGC yedD 1980892 - 1980479 - | hypothetical protein yedE 1981079 - 1982284 + | putative inner membrane protein yedF 1982281 - 1982514 + | hypothetical protein TERM 2452 1982520 - 1982548 + T 77 -11.7 -2.77182 | opp_overlap 1982515 1982511 1982504, overlap 1982517 TCAGAAGTAATCCCT CATTCCCGCTGTG GCC CACAGCGGGAACA TCGTTACCTCTGACA TERM 2453 1983308 - 1983258 - T 82 -7.6 -4.66833 | gap 1, overlap 1983259 GGGTAATGTCAAAAA CCAGGGCGCGGAGTTAATTCAAC CTGTTT GTTGACATC-CTCCACGCCCTGA ATGACGAGGACCCCT TERM 2454 1983307 - 1983259 - T 70 -8.9 -3.39618 | gap 1, overlap 1983258 GGTAATGTCAAAAAC CAGGGCGCGGAGTTAATTCAAC CTGTTT GTTGACATC-CTCCACGCCCTG AATGACGAGGACCCC TERM 2455 1983330 - 1983347 + T 70 -9.9 -2.94888 | overlap 1983328 1983343 AGGACCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT S2072 1984137 - 1983331 - | putative virulence protein TERM 2456 1983906 - 1983919 + g 73 -3.8 -4.83615 | overlap 1983893 1983891 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG TERM 2457 1984194 - 1984225 + H 78 -6.6 -4.65895 | gap 1 CGAGCTTAACGCCCT GCGGATAGCGGAATG CAT CATTCTGTCA-CCGC TTTTTGAATCAGGGG TERM 2458 1985325 - 1985309 - H 77 -3.8 -5.25976 | AATTAAAAAAATAAA TTATGA GTCAA TCATAA ATAACAACCTTTAAT nmpC 1985546 - 1986628 + | putative outer membrane porin protein C precurser TERM 2459 1986678 - 1986643 - T 100 -14.2 -3.68529 | gap 1, overlap 1986645 ATCTGATTACTCAAA GATATGTTGTGGGAGGC TTT GCCTCCC-CAACATATA AGTGGCGCTCTCAAG TERM 2460 1986676 - 1986645 - T 100 -16.8 -3.42395 | gap 1, overlap 1986643 CTGATTACTCAAAGA TATGTTGTGGGAGGC TTT GCCTCCC-CAACATA TAAGTGGCGCTCTCA TERM 2461 1986751 - 1986770 + T 84 -7.8 -4.78107 | TTACCCTTTATTTTC TGGGACGT TTCA ACGCCCCA TTTTTAATAATACTC S4819 1987915 - 1987178 - | putative regulator ybcL 1988476 - 1987925 - | putative kinase inhibitor emrE 1988977 - 1988645 - | multidrug efflux protein fliE 1989636 - 1989322 - | flagellar hook-basal body protein FliE TERM 2462 1989448 - 1989462 + g 93 -8.6 -4.88067 | TAGCGCCACGCCGGG TTCACC GAG GGTGAA TTTTTCTGCCTGCGT TERM 2463 1990861 - 1990845 - H 72 -5.7 -4.40882 | overlap 1990846 GACAAATCAAAATAA CCGCCAG CAG CAGGCGA GCACCACCAGCAATA TERM 2464 1991148 - 1991163 + H 76 -8.2 -4.07568 | opp_overlap 1991147 1991135 1991148 TAGCAGTGACGAAAG CGGCGG AGCA CTGCCG TTTTGGCAACAGCAA fliG 1991502 - 1992497 + | flagellar motor switch protein G fliH 1992490 - 1993176 + | flagellar assembly protein H TERM 2465 1993378 - 1993406 + G 70 -3.8 -4.72986 | overlap 1993380 ACGAAGTAGAAAGCG AAGTCGTTGGCT TTAAC GGTCAACGGCTG TTTTTAATGCCGCTG TERM 2466 1993509 - 1993492 - g 82 -11.3 -3.56099 | opp_overlap 1993505 1993507 CAGAAGGGCTGCAAA GCGGCAA GCAG TTGCCGC TCGGTCCGGCGTTAT TERM 2467 1993771 - 1993795 + G 74 -8.5 -3.95584 | TGATGGCACGCTACA CCCGCGCCGAT GTC ATTGTCGTGGG TTTGATTGGTGAACG TERM 2468 1994116 - 1994088 - g 74 -10.4 -3.53012 | opp_overlap 1994094 TCGGTGTTTGCCAAA TTACCGGCAC TGGTCGAGC GTGCCGGTAA TGGCATTAGCGGCGG fliI 1993176 - 1994549 + | flagellum-specific ATP synthase TERM 2469 1995700 - 1995681 - g 76 -7.9 -4.16842 | GCCAGGGGCAACAAA GTGCAGA GTTGCG TCTGCAC CCACAGGATTTAGGT fliK 1994909 - 1996036 + | flagellar hook-length control protein fliL 1996141 - 1996605 + | flagellar basal body-associated protein FliL fliM 1996610 - 1997614 + | flagellar motor switch protein FliM TERM 2470 1997720 - 1997708 - g 74 -2.6 -5.12617 | opp_overlap 1997711, overlap 1997697 CAACCAGCGAAAAAA GCGC TGCCG ACGC GGTGTTCCAGCAATT fliN 1997611 - 1998024 + | flagellar motor switch protein FliN fliO 1998027 - 1998392 + | flagellar biosynthesis protein FliO TERM 2471 1998819 - 1998807 - f 72 -4.7 -4.57073 | opp_overlap 1998811, overlap 1998809 GAGGCGCTGGAAAAA GGGGC GCA GCCGC TGCGTGAGTTTATGC fliQ 1999167 - 1999436 + | flagellar biosynthesis protein FliQ TERM 2472 2000131 - 2000157 + G 72 -4.4 -4.58685 | overlap 2000113 2000133 CGGCATCTCTTTAAT GGCGGCATTAAT GCC GTTAATTGCGCC TTTTTGCGAACATTT fliR 1999445 - 2000230 + | flagellar biosynthesis protein FliR rcsA 2000515 - 2001138 + | positive regulator for ctr capsule biosynthesis, positive transcription factor TERM 2473 2001174 - 2001141 - T 85 -13.9 -3.04248 | opp_overlap 2001135 2001134, overlap 2001131 2001143 CAACATGCGCTAACA CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG AATAAGATTACTCTG TERM 2474 2001172 - 2001143 - T 73 -10.7 -3.07522 | opp_overlap 2001135 2001134, overlap 2001141 ACATGCGCTAACACA TTCTGACTGGTGG TTTC CCACCAGTCAGGC TGAATAAGATTACTC dsrB 2001370 - 2001182 - | hypothetical protein S2092 2001533 - 2001760 + | hypothetical protein TERM 2475 2001799 - 2001777 - T 100 -9.9 -5.88565 | gap 1 TGCACAATAAAAAAA TCCCGAC-CC TGAG GGTGTCGGGA TGAAACTTGCTTAAG TERM 2476 2002938 - 2002926 - T 72 -9.1 -3.64703 | GTTTTGCGAGGTAAA GCCGA CGG TCGGC CAATGACTGGAGTTG TERM 2477 2004681 - 2004732 + T 79 -10.2 -3.64049 | gap 1, opp_overlap 2004697, overlap 2004692 ACTATCATTCATTGC AGGCATTG-GGACACCAGGCCGGAT GTG ATCCGGCCTGGTGTTAATGATACCC TTTCAAACTTCTTCC TERM 2478 2004692 - 2004720 + T 100 -23.3 -3.22491 | opp_overlap 2004697, overlap 2004681 TTGCAGGCATTGGGA CACCAGGCCGGAT GTG ATCCGGCCTGGTG TTAATGATACCCTTT TERM 2479 2004715 - 2004697 - T 86 -14.6 -2.62983 | opp_overlap 2004692 2004681 GGCATTGGGACACCA GGCCGGAT GTG ATCCGGCC TGGTGTTAATGATAC S2096 2004917 - 2004735 - | hypothetical protein yedI 2005913 - 2004996 - | hypothetical protein yedA 2006086 - 2007006 + | hypothetical protein vsr 2007465 - 2006995 - | DNA mismatch endonuclease, patch repair protein dcm 2008864 - 2007446 - | DNA cytosine methylase TERM 2480 2008133 - 2008155 + g 75 -4.9 -4.78752 | gap 1, overlap 2008150 GCCCAGTTCGTCCAG CG-TCTGCAT GATG ATGCGGAACG TTTTTCCCTTATCGT TERM 2481 2008893 - 2008873 - R 83 -13.3 -3.15999 | CCTGCATAGATTTAA CCGGCCATC TGA GATGGCCGA CAGGTTAACATAATT S2103 2010581 - 2009769 - | ISEhe3 orfB S2104 2010916 - 2010638 - | ISEhe3 orfA TERM 2482 2011433 - 2011422 - gR 70 -5.8 -4.17789 | opp_overlap 2011422 CAACTACAAAGCAAA TGGC GATG GCCA TGGTTTATCTGCAAC S2106 2012660 - 2011755 - | insertion element IS2 transposase InsD S2105 2010943 - 2011830 + | putative outer membrane pore protein S2107 2012983 - 2012618 - | insertion sequence 2 OrfA protein S2108 2013047 - 2013256 + | putative outer membrane protein TERM 2483 2013329 - 2013300 - f 84 -13.7 -2.89741 | opp_overlap 2013300, overlap 2013297 2013295 2013292 2013290 TAAAACATAACACCA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT TERM 2484 2013300 - 2013329 + F 100 -13.7 -5.4756 | opp_overlap 2013300 2013297 2013295 2013292 2013290 TAAAACATAACACCA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT S2109 2013884 - 2014159 + | IS1 orfA S2110 2014078 - 2014581 + | IS1 orfB yedU 2014627 - 2015499 + | chaperone protein HchA TERM 2485 2015513 - 2015545 + T 100 -12.8 -5.055 | opp_overlap 2015513 2015512 AAGCGCATAATCAAT CGCAGCCACGTT AATACTCAC GACGTGGCTGCG TTTTTTCACGGTTAA TERM 2486 2015545 - 2015513 - T 76 -12.1 -2.67017 | opp_overlap 2015513, overlap 2015512 AAGCGCATAATCAAT CGCAGCCACGT TAATACTCACG ACGTGGCTGCG TTTTTTCACGGTTAA yedV 2016943 - 2015585 - | putative 2-component sensor protein yedW 2017614 - 2016943 - | transcriptional regulatory protein YedW S2114 2017747 - 2018160 + | hypothetical protein TERM 2487 2018233 - 2018178 - f 72 -6.3 -4.323 | gap 2, opp_overlap 2018178 CGTAAATATGTAAAA GCTGATCTCTGCT-A-CTGTTAGGGAG GTGA CTCCCTGACAGATTAACAGTAAACAGC TCTTGTTGGTTAACG S2116 2019274 - 2019909 + | putative sulfite oxidase subunit YedZ S2117 2020167 - 2020817 + | hypothetical protein TERM 2488 2020795 - 2020817 + T 81 -3.4 -5.44119 | overlap 2020800 GTAGCGAAGAAGTGG TCGAGGAGAT GAT GTCTCATTGA TTTTTTTGCGCTGAC TERM 2489 2020907 - 2020931 + T 100 -9.4 -5.62045 | gap 1, opp_overlap 2020907 2020904 AGTAAGACAAACTCA GACACG-CTCA TACT TGAGTCGTGTC TTTTTTATTATGTCT TERM 2490 2021597 - 2021583 - T 78 -5.8 -4.77986 | opp_overlap 2021582 TCAAAGAGTTAAAAA TTTTTC TTG GAAAAA ATGTCTTAAAATCGT TERM 2491 2021848 - 2021880 + T 100 -8.4 -5.63236 | gap 1, opp_overlap 2021794 2021848 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT S2118 2022164 - 2021895 - | putative bacteriophage protein TERM 2492 2022929 - 2022897 - H 86 -13.6 -3.16564 | gap 1, opp_overlap 2022897 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT TERM 2493 2022897 - 2022929 + H 89 -11.4 -4.08919 | gap 1, opp_overlap 2022897 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT ipaH_5 2023205 - 2024848 + | invasion plasmid antigen TERM 2494 2024889 - 2024914 + T 72 -10.3 -2.80784 | opp_overlap 2024890 2024891, overlap 2024886 ACTGACTCCGGAAAA ACGGAGGCCCG CCCC CGGGCCTCCCC TGATTCATCCGTTTC TERM 2495 2024913 - 2024890 - T 100 -13.8 -4.58395 | opp_overlap 2024889 2024886, overlap 2024891 CTGACTCCGGAAAAA CGGAGGCCCG CCCC CGGGCCTCCC CTGATTCATCCGTTT TERM 2496 2024912 - 2024891 - T 100 -17.3 -3.34716 | opp_overlap 2024889 2024886, overlap 2024890 TGACTCCGGAAAAAC GGAGGCCCG CCCC CGGGCCTCC CCTGATTCATCCGTT S2121 2025405 - 2025028 - | hypothetical protein S2122 2026462 - 2026737 + | IS1 orfA S2123 2026656 - 2027159 + | IS1 orfB TERM 2497 2027243 - 2027227 - T 100 -10.1 -5.67063 | opp_overlap 2027226 2027227 TCCACTATAAAAAAA CCGCCAA TTT CTGGCGG CTTATATATTAATCA S2124 2029751 - 2027802 - | putative tail protein TERM 2498 2029015 - 2029025 + g 79 -2.4 -5.28826 | GGGCTAATGCGCAAC GAGC GGA GCAC TTTTTTCTGCGATTT S2126 2030171 - 2029836 - | bacteriophage protein TERM 2499 2029921 - 2029909 - G 91 -5.5 -5.41143 | overlap 2029910 GACTGGGTAAAAAAA CGCAG GAT CTGCA TGCTGGTCTTAAAAA S2127 2030527 - 2030171 - | hypothetical protein S2128 2032023 - 2030527 - | putative sheath protein TERM 2500 2032081 - 2032063 - R 71 -10.2 -2.67143 | ACACGTACCACATCA CCCGCCGC TAT ACGGCGGA ACCAGTAGCTGCTTT S2129 2032445 - 2032191 - | hypothetical protein S2130 2033288 - 2032575 - | IS600 orfB S2131 2033731 - 2033429 - | IS600 orfA TERM 2501 2034356 - 2034373 + r 79 -9.1 -4.19238 | overlap 2034344 TCTTCCAGAAGATTT CTGGCTG TGTT CAGCCGG TTTTCCAGTTCCGAC TERM 2502 2034379 - 2034414 + r 70 -9.7 -3.09028 | overlap 2034378 2034383 GTTCAGCCGGTTTTC CAGTTCCGACAGTCG TTTTTC TGCCTGTCGGATCTG ATTTTCAAGCTTATG S2133 2034956 - 2034606 - | ISSfl3 orfB S2134 2035450 - 2034953 - | ISSfl3 orfA TERM 2503 2035291 - 2035279 - G 73 -9.1 -3.62046 | CGATCCGGGCAACAA CAGCC CCA GGCTG TAACGCCTGCTTAGC TERM 2504 2035631 - 2035658 + r 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG TERM 2505 2036024 - 2036013 - R 93 -7.2 -5.79595 | TTTGAAAAGAAAAAA CCGC AAAA GCGG GCGAAACGATATATA TERM 2506 2036645 - 2036680 + r 89 -11.2 -4.14243 | opp_overlap 2036655, overlap 2036650 2036655 TATCCGAGATAAGTG GCACAAAAAACCCGCT TGTG GGCGGGTTTTGTTTGC TTTTGCCATCACGTA TERM 2507 2036650 - 2036675 + r 79 -8.3 -4.20806 | opp_overlap 2036655, overlap 2036645 2036655 GAGATAAGTGGCACA AAAAACCCGCT TGTG GGCGGGTTTTG TTTGCTTTTGCCATC TERM 2508 2036655 - 2036670 + r 91 -8.2 -5.08483 | opp_overlap 2036655, overlap 2036650 2036645 AAGTGGCACAAAAAA CCCGCT TGTG GGCGGG TTTTGTTTGCTTTTG TERM 2509 2036670 - 2036655 - R 91 -7.5 -5.25803 | opp_overlap 2036650 2036645 2036655 AAGTGGCACAAAAAA CCCGC TTGTGG GCGGG TTTTGTTTGCTTTTG S2139 2037425 - 2036742 - | putative Q antiterminator of prophage S2140 2037787 - 2037422 - | putative crossover junction endodeoxyribonuclease S2142 2038774 - 2037788 - | hypothetical protein TERM 2510 2039058 - 2039090 + Gr 73 -11.2 -2.60219 | gap 1, opp_overlap 2039059 2039060, overlap 2039057 TTTGAATGCATGAGA AC-GCCGCCCGTGCC TGCT GGCAGGGGCGGCAGA GTTATCCGAATTGTA TERM 2511 2039088 - 2039059 - gR 100 -17.1 -3.44319 | opp_overlap 2039058 2039057, overlap 2039060 TTGAATGCATGAGAA CGCCGCCCGTGCC TGCT GGCAGGGGCGGCA GAGTTATCCGAATTG TERM 2512 2039087 - 2039060 - gR 100 -18.4 -2.6627 | opp_overlap 2039058 2039057, overlap 2039059 TGAATGCATGAGAAC GCCGCCCGTGCC TGCT GGCAGGGGCGGC AGAGTTATCCGAATT TERM 2513 2039210 - 2039223 + Gr 70 -9.5 -3.06183 | opp_overlap 2039210 CCAGAAAAAACAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 2514 2039223 - 2039210 - gR 100 -9.5 -5.49579 | opp_overlap 2039210 CCAGAAAAAACAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG S2141 2038773 - 2039252 + | hypothetical protein S2143 2039506 - 2039294 - | putative cell killing protein of prophage TERM 2515 2039420 - 2039435 + g 86 -9 -4.36411 | opp_overlap 2039420 2039419 ACAGATGACGATAAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 2516 2039514 - 2039564 + r 100 -12.1 -4.64844 | gap 1 TTCAGCATGGATTGA GCCTCAGATTAATGTTAAGCGTCT TGCA GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC TERM 2517 2039774 - 2039759 - R 79 -3.2 -5.42862 | overlap 2039747 ACACCCCTAAAAAAA GGGCAT TTAT ATGTCC AAACATTAATATCAA S2144 2040436 - 2040101 - | hypothetical protein S2145 2040562 - 2040684 + | hypothetical protein S2146 2040864 - 2041709 + | putative integrase for prophage CP-933U S2148 2041906 - 2042742 + | hypothetical protein TERM 2518 2043927 - 2043915 - g 72 -5.5 -4.56597 | opp_overlap 2043915, overlap 2043917 GCCGCGGGGCAAAAA TGCGA ATG CCGCA TATCGTCCCCCTCTC S2152 2043593 - 2044342 + | putative integrase TERM 2519 2044378 - 2044396 + T 82 -11 -3.60814 | opp_overlap 2044375 2044372 TCTGGCAAATTACCA CCACCTCT ACA GGAGGTGG TTCTATATAGACTTT TERM 2520 2044857 - 2044868 + T 74 -5.8 -4.63218 | opp_overlap 2044853 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S2155 2045545 - 2045315 - | IS911 orfA S2157 2046243 - 2046545 + | IS600 orfA S2158 2046686 - 2047399 + | IS600 orfB TERM 2521 2047656 - 2047679 + F 100 -15.4 -3.78096 | CGCTCGTGATAGCCT GGCGAAGATC ATCC GATCTTCGCC TTATACTTTTGTTTC TERM 2522 2048271 - 2048289 + G 84 -7.4 -4.65895 | overlap 2048273 CCCCGCTATCGCATT TTGATGCG CGC CGCGTCGA TTTTTCCCTCGCACG TERM 2523 2048529 - 2048541 + G 72 -7.7 -3.91084 | opp_overlap 2048527 2048525 2048524 2048529 GGAAAAAACACCAGA TGCCA GCA TGGCA TTTAATTACCGCTGA amn 2047751 - 2049205 + | AMP nucleosidase S2161 2049548 - 2050264 + | hypothetical protein TERM 2524 2050272 - 2050306 + T 84 -13.9 -2.90382 | opp_overlap 2050277 2050281, overlap 2050277 2050281 ATCTCTAATTATATT TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATTCTT TERM 2525 2050277 - 2050301 + T 77 -9.4 -3.8766 | opp_overlap 2050277 2050281, overlap 2050272 2050281 TAATTATATTTTAAA GAAATCTGTC TTTAT GGCAGATTTC TTTAATCTCATATAA TERM 2526 2050380 - 2050365 - T 75 -3.2 -5.24531 | ATTGCTTATAAAAAA TCCCCG TCCC CAGAGA AATAATATTTATTAA TERM 2527 2050657 - 2050629 - T 100 -19 -5.4387 | opp_overlap 2050624 2050623 ACAGAAATCAAAAAA CCCGGCCACTTT TTTAC AAAGTGGCCGGG TAAAAATAATTTTTA TERM 2528 2050658 - 2050672 + T 79 -4.4 -5.13473 | overlap 2050624 2050623 TACAAAGTGGCCGGG TAAAAA TAA TTTTTA TTTTTTAACTGTCCT TERM 2529 2051773 - 2051793 + T 75 -6.2 -4.43681 | TAAGAATATTCAGGC TACCGTTA ATCAG TAGCGGTA TTTTCGTATTCCCTG TERM 2530 2052109 - 2052099 - T 79 -3.2 -5.42862 | ATAGCTGCAAAAAAA GCCA TAA TGAC CATATTGAAGCTGTC TERM 2531 2052616 - 2052634 + T 100 -11.7 -4.86133 | opp_overlap 2052616, overlap 2052625 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG TERM 2532 2052634 - 2052616 - T 95 -11.7 -4.12942 | opp_overlap 2052616 2052625 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG cbl 2053591 - 2052641 - | transcriptional regulator Cbl nac 2054610 - 2053693 - | nitrogen assimilation transcriptional regulator TERM 2533 2054164 - 2054202 + g 78 -5.4 -4.8622 | AGCCACAGGGGAATG CTCATAAATCACCGCC ATATCGA GTTGGTGATTTATCAG TTTTTCGTTAAGCAC TERM 2534 2055019 - 2055048 + r 80 -12.3 -3.02946 | opp_overlap 2055025, overlap 2055025 AGAGGAGCCAAATTC AAAAAAGCCTGCT TTCG AGCAGGCTTTTTA CTTTCTAATTACCAA TERM 2535 2055042 - 2055025 - R 100 -11.3 -5.22039 | opp_overlap 2055025 2055019 GCCAAATTCAAAAAA GCCTGCT TTCG AGCAGGC TTTTTACTTTCTAAT TERM 2536 2055025 - 2055042 + r 100 -11.3 -5.05505 | opp_overlap 2055025, overlap 2055019 GCCAAATTCAAAAAA GCCTGCT TTCG AGCAGGC TTTTTACTTTCTAAT erfK 2056004 - 2055069 - | hypothetical protein cobT 2057145 - 2056066 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2057900 - 2057157 - | cobalamin synthase S2172 2059131 - 2058418 - | IS600 orfB S2173 2059574 - 2059272 - | IS600 orfA is629a 2059817 - 2060143 + | IS629 orfA TERM 2537 2060459 - 2060447 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC is629b 2060379 - 2061026 + | IS629 orfB TERM 2538 2061877 - 2061841 - T 82 -10.9 -3.60998 | opp_overlap 2061848, overlap 2061837 2061844 2061848 ACAGATAAGAATCAA TGAGCAATGAGGGTTGC CGG GCAACCCTCATTGAATA AAACGGGAATTACTT TERM 2539 2061874 - 2061844 - T 100 -17 -2.91042 | opp_overlap 2061848, overlap 2061841 2061837 2061848 GATAAGAATCAATGA GCAATGAGGGTTGC CGG GCAACCCTCATTGA ATAAAACGGGAATTA TERM 2540 2061870 - 2061848 - T 100 -16.4 -3.30956 | opp_overlap 2061848, overlap 2061844 2061841 2061837 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA TERM 2541 2061848 - 2061870 + T 100 -16.4 -3.05384 | opp_overlap 2061848 2061844 2061841 2061837 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA yeeX 2062282 - 2061887 - | hypothetical protein TERM 2542 2062195 - 2062178 - G 70 -5.6 -4.329 | GAACAGACGAACAAA TTCCAG TACGTC CTGGAA TGAAGGCTTGGTAGT TERM 2543 2062753 - 2062726 - H 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 2544 2063093 - 2063105 + G 73 -9.1 -3.62046 | opp_overlap 2063086 GCTAAGCAGGCATTA CAGCC TGG GGCTG TTGTTGCCCGGATCG S2179 2062757 - 2063431 + | ISSfl3 orfA S2180 2063428 - 2063640 + | ISSfl3 orfB S2181 2064161 - 2063643 - | IS629 orfA S2182 2064526 - 2064173 - | IS629 orfB TERM 2545 2064210 - 2064222 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA TERM 2546 2065315 - 2065278 - g 70 -6.2 -4.1585 | overlap 2065279 2065283 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 2547 2065337 - 2065320 - g 82 -9.1 -4.19238 | overlap 2065333 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA S2184 2065084 - 2066685 + | ISSfl3 orfC TERM 2548 2066746 - 2066729 - f 72 -8.5 -3.70925 | TTACGAACAAATTAA GCCTTTT CTCG AAAAGGC CATGACAATGTACAA S2185 2066754 - 2067068 + | hypothetical protein S2187 2067776 - 2067528 - | ISSfl3 orfD S2189 2069125 - 2068553 - | ISSfl3 orfC TERM 2549 2068872 - 2068889 + g 82 -9.1 -4.19238 | overlap 2068860 TCTTCCAGAAGATTT CTGGCTG TGTT CAGCCGG TTTTCCAGTTCCGAC TERM 2550 2068894 - 2068931 + g 70 -6.2 -4.1585 | overlap 2068895 2068899 TGTTCAGCCGGTTTT CCAGTTCCGACAGTCG TTTTTC TGCCTGTCGGATCTGA TTTTCAAGCTTATGA S2190 2069472 - 2069122 - | ISSfl3 orfB S2191 2069966 - 2069469 - | ISSfl3 orfA TERM 2551 2069807 - 2069795 - G 73 -9.1 -3.62046 | CGATCCGGGCAACAA CAGCC CCA GGCTG TAACGCCTGCTTAGC TERM 2552 2070147 - 2070174 + H 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG sbcB 2071243 - 2072667 + | exonuclease I yeeD 2072937 - 2072710 - | hypothetical protein yeeE 2074009 - 2072951 - | putative transport system permease protein TERM 2553 2074140 - 2074167 + r 81 -8.4 -4.44667 | opp_overlap 2074140 AAAAGAATAAAAAAA CCGGAGCCAAAT GTTC ATTCGACTCCGG TTTATTATTAGAAAA TERM 2554 2074167 - 2074140 - R 100 -12.8 -6.04419 | opp_overlap 2074140 AAAAGAATAAAAAAA CCGGAGCCAAAT GTTC ATTCGACTCCGG TTTATTATTAGAAAA yeeF 2075546 - 2074188 - | putative amino acid/amine transport protein TERM 2555 2075727 - 2075701 - R 87 -7.3 -5.26875 | opp_overlap 2075704, overlap 2075704 GTTTGAAGCAAAAAA TAACCGACGCT AATTA AACGTCGGTTT TTAATCATTTTTTGA TERM 2556 2075704 - 2075724 + r 82 -6.8 -4.88129 | opp_overlap 2075701 2075704 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTTAATCATTTTT TERM 2557 2075724 - 2075704 - R 89 -9 -4.72473 | opp_overlap 2075704, overlap 2075701 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTTAATCATTTTT yeeY 2076742 - 2075759 - | putative LYSR-type transcriptional regulator S2198 2077612 - 2076788 - | putative enzyme of sugar metabolism S2199 2078264 - 2077971 - | IS1 orfB S2200 2078667 - 2078392 - | IS1 orfA yefM 2078973 - 2078701 - | antitoxin YefM TERM 2558 2079362 - 2079388 + H 100 -19.5 -5.4505 | opp_overlap 2079362 TGAACGCATGAGAAA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG TERM 2559 2079388 - 2079362 - H 100 -20.2 -3.99405 | opp_overlap 2079362 TGAACGCATGAGAAA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG TERM 2560 2079746 - 2079758 + G 81 -10.5 -3.64703 | CGTCGTCTGGATTTC GGCGG CTG CCGCC TTTCGCTGGCAACGC TERM 2561 2080299 - 2080289 - g 70 -6.8 -4.00407 | opp_overlap 2080292, overlap 2080292 ATGGAAAAACTGAAA GCAC TGG GTGC CAGTTCAATCCTGGT hisG 2079443 - 2080342 + | ATP phosphoribosyltransferase hisD 2080348 - 2081652 + | histidinol dehydrogenase TERM 2562 2082508 - 2082522 + G 72 -7.1 -4.16943 | opp_overlap 2082505 2082506 2082503 CACTGAAAGAGATCC CCTGC GTGGA GCAGG TTTTCGACTCTGAAA hisC 2081649 - 2082719 + | histidinol-phosphate aminotransferase TERM 2563 2083470 - 2083483 + G 70 -5.9 -4.28487 | opp_overlap 2083470, overlap 2083459 2083465 CCCTCGGCGACAAAC GCGGT ATTT GCCGC TTTGGTTTTGTGCTG hisB 2082719 - 2083786 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2083786 - 2084376 + | imidazole glycerol phosphate synthase subunit HisH hisA 2084376 - 2085113 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 2085095 - 2085871 + | imidazole glycerol phosphate synthase subunit HisF hisI 2085865 - 2086476 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 2564 2086613 - 2086638 + T 100 -14.7 -4.21607 | opp_overlap 2086613 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA TERM 2565 2086638 - 2086613 - T 100 -14.7 -5.75945 | opp_overlap 2086613 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA wzzB 2087675 - 2086662 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 2566 2087081 - 2087109 + g 72 -4.5 -4.65895 | GCTCCTGCGCGACCA CTTCCTGGGTTCT TAA AGAGTCCTGCAAG TTTTTCCGTCCCAGA TERM 2567 2087774 - 2087754 - R 76 -8.3 -4.0865 | GGTAACAAAAGACAA TCAGGGC GTAAATA GCCCTGA TAACAAGATGTTAGT TERM 2568 2088557 - 2088541 - R 76 -8.7 -4.07687 | opp_overlap 2088541 2088542, overlap 2088542 ATCGCTGCGGTAAAA CCAACGG GAA CCGTTGA TTTGATGACCATAAC TERM 2569 2088556 - 2088542 - R 70 -10 -3.04398 | opp_overlap 2088541 2088542, overlap 2088541 TCGCTGCGGTAAAAC CAACGG GAA CCGTTG ATTTGATGACCATAA TERM 2570 2088945 - 2088973 + r 76 -8.3 -4.1196 | opp_overlap 2088966, overlap 2088946 CTGTGAATCATGATG TTTTTAGCATCGT GAT AAGATGCTAAAAG TTTTAACGCTACGTT TERM 2571 2088946 - 2088972 + r 70 -9.6 -3.06694 | opp_overlap 2088966, overlap 2088945 TGTGAATCATGATGT TTTTAGCATCGT GAT AAGATGCTAAAA GTTTTAACGCTACGT TERM 2572 2089127 - 2089105 - R 100 -11.2 -5.75945 | opp_overlap 2089104 ATTTGGCAAAAAAAA GCCCGGTGCA ATA TACGCCGGGC CTCAATTTTATTGTT gnd 2090561 - 2089155 - | 6-phosphogluconate dehydrogenase S2213 2091029 - 2090670 - | hypothetical protein S2214 2091577 - 2091026 - | hypothetical protein S2215 2092277 - 2091678 - | hypothetical protein TERM 2573 2091996 - 2091970 - G 70 -5.2 -4.43213 | opp_overlap 2091978, overlap 2091971 GGGAACAGAGGAAAA CGCAAATATTGT TCA ACAACAATTGCA TGGTGCTCAACTAAT TERM 2574 2092228 - 2092205 - G 70 -4 -4.6644 | overlap 2092216 AACACACCGTAAAAA TTAAAAAGAT AGCA ATCTTATTAA ATTGCCCGACCATGC S2216 2092939 - 2092448 - | hypothetical protein rfbJ 2093386 - 2092997 - | glycosyl transferase rfbI 2093823 - 2093449 - | glycosyl translocase rfc 2094975 - 2093827 - | O-antigen polymerase TERM 2575 2093980 - 2093993 + g 80 -5.3 -5.00846 | opp_overlap 2093973 2093980 AAAAAGTATTAACGA CATCA TTAA TGATG TTTTTGTACTATTTA TERM 2576 2094485 - 2094473 - G 100 -6.9 -5.76949 | GATTTGGAAAAAAAA GCCCC ATC GGGAC GAAAAAAGAACTCGC rfbG 2095864 - 2094995 - | dTDP-rhamnosyl transferase TERM 2577 2095248 - 2095263 + g 74 -7.6 -4.00684 | overlap 2095259 ACTTGGTTGTTTTCA TGCTGT CTGT ACAGCA TTGTTGGTTTTCTAT TERM 2578 2095790 - 2095801 + g 81 -4.4 -5.11063 | opp_overlap 2095790 TGATATAAAAATTGA GATG TCTA CATC TTTTTGTTCAATAAT rfbF 2096783 - 2095893 - | dTDP-rhamnosyl transferase rfbE 2098069 - 2096813 - | polysaccharide biosynthesis protein TERM 2579 2096967 - 2096941 - G 71 -2.2 -4.94487 | overlap 2096943 CCATAAAATACAAAA GGGCTAAATAAG GAA CCAATTCAGCAC AATGAATCAAAGCAG rfbC 2098630 - 2098085 - | dTDP-6-deoxy-L-mannose-dehydrogenase rfbA 2099512 - 2098634 - | glucose-1-phosphate thymidylyltransferase TERM 2580 2098992 - 2099007 + g 74 -3.3 -4.90266 | TAGAAATAAAGCCCA GTAAC CGCATA GTTAC TTTTTGGTTCCTGCG TERM 2581 2099526 - 2099566 + r 79 -8.3 -4.2528 | opp_overlap 2099534 ATTTCACCATTCCTT TTAATTCATCTCGCTCTAG CAT CATGAGCGAGATGCAATAA TTTGTTAAATTGCCG rfbD 2100470 - 2099571 - | dTDP-4-dehydrorhamnose reductase rfbB 2101555 - 2100470 - | dTDP-glucose 4,6 dehydratase galF 2102821 - 2101928 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalF wcaM 2104390 - 2102996 - | putative colanic acid biosynthesis protein TERM 2582 2103115 - 2103130 + g 79 -4 -5.03314 | CATGAACATTTGCAA GAGACA GCAG TGTTTC TTTTTTCGCCATAAA TERM 2583 2104352 - 2104334 - G 70 -10.3 -3.18383 | AGGGGTATGGAGGAA GGCAAGC GCCGA GCTTGCC GTCAGGAAGGTGCGT wcaL 2105621 - 2104401 - | putative colanic acid biosynthesis glycosyl transferase TERM 2584 2105036 - 2105047 + g 86 -5.8 -5.03145 | CGGCGATTTTTTCTC TGGG GCAG CCCA TTTTTTGCAGCCTTC wcaK 2106898 - 2105618 - | putative pyruvyl transferase TERM 2585 2106979 - 2107031 + r 87 -10.6 -4.08216 | gap 1, opp_overlap 2107013 2107028, overlap 2106966 2106969 2107014 GATGCGACGCTGGCG CGTCTTATCAGGCCTACAGGTCCCG AGCA CAGAACC-GTAGGACGGATAAGGCG TTTTACGCCGCATCC TERM 2586 2107040 - 2107028 - R 70 -9.1 -3.37796 | opp_overlap 2106979 2107014 CCGTAGGACGGATAA GGCGT TTT ACGCC GCATCCGGCAACCGT wzxC 2108556 - 2107078 - | colanic acid exporter wcaJ 2109952 - 2108558 - | putative UDP-glucose lipid carrier transferase cpsG 2111377 - 2110007 - | phosphomannomutase TERM 2587 2111403 - 2111425 + r 81 -3.4 -5.3658 | overlap 2111410 TTTTTCAGGCAATAG TTGGCCCT GACCGAA ACGGCCAA TTTTATTTTTGTCGT TERM 2588 2111523 - 2111508 - R 72 -5.4 -4.3898 | gap 1, overlap 2111513 ATCAGGCCTACAAAA CCGAACC GTA GGT-CGG ATAAGGCGTTCACGC TERM 2589 2111554 - 2111513 - R 79 -11.5 -3.41587 | opp_overlap 2111536, overlap 2111508 2111528 GCCTACAAAACCGAA CCGTAGGTCGGATAAGGCG TTCA CGCCGCATCCGACAAACAG CGCCTGATGCGACGT TERM 2590 2111576 - 2111528 - R 77 -10.2 -3.30124 | opp_overlap 2111536, overlap 2111513 CCGTAGGTCGGATAA GGCGTTCACGCCGCATCCGACA AACAG CGCCTGATGCGACGTTTACACC CGTCCGTAGCGATCC cpsB 2113006 - 2111570 - | mannose-1-phosphate guanyltransferase wcaI 2114232 - 2113009 - | glycosyl transferase TERM 2591 2113376 - 2113400 + g 76 -3.5 -5.00616 | overlap 2113378 GGGAAAAATTGCATG TTGCGCAGT CCACGCT GCTGCGCCA TTTTTTCCAGCCGCG wcaH 2114708 - 2114229 - | GDP-mannose mannosyl hydrolase wcaG 2115676 - 2114708 - | putative nucleotide di-P-sugar epimerase or dehydratase gmd 2116800 - 2115679 - | GDP-D-mannose dehydratase wcaF 2117374 - 2116826 - | putative colanic acid biosynthesis acetyltransferase WcaF S2242 2117570 - 2117845 + | IS1 orfA S2243 2117764 - 2118267 + | IS1 orfB TERM 2592 2118769 - 2118756 - T 76 -5.3 -4.84146 | ACCAGATAAAAGAAA CGTAA TATC TTACG ATGGTTGTGTGGCGA wcaB 2120780 - 2120292 - | putative colanic acid biosynthesis acetyltransferase WcaB S2248 2123877 - 2121715 - | tyrosine kinase TERM 2593 2123662 - 2123677 + g 72 -6.1 -4.33767 | GCCGATATCCTGCAC CAGCG AATTGC CGCTG TTTTGCTCGATTTGT wzb 2124323 - 2123880 - | tyrosine phosphatase wza 2125468 - 2124329 - | putative polysaccharide export protein TERM 2594 2126901 - 2126857 - g 95 -15.7 -2.90075 | opp_overlap 2126866 TTTCCGCTAATCAGA CGCTACGCCAGCGGACTACCG AAG CGGTAATGCGCCTGCTTAGCG GGCAAAAAGAAGATG TERM 2595 2127543 - 2127531 - g 70 -4.1 -4.72272 | overlap 2127532 CCGCTGGATGAAAAA CGTGA ATA TCACA CCATTGCCGGGCTGT yegH 2126127 - 2127710 + | putative transport protein asmA 2130012 - 2128159 - | putative assembly protein TERM 2596 2129146 - 2129175 + g 70 -7.1 -4.128 | GTCAAGATTCAGTTG CGGGAATTGCAGT CTCA GCTGCCATTCCGG TTTCTCTGTCAGCGT dcd 2130615 - 2130034 - | deoxycytidine triphosphate deaminase udk 2131348 - 2130707 - | uridine kinase TERM 2597 2130748 - 2130758 + g 70 -4.6 -4.56597 | opp_overlap 2130744 2130742 CTTTCAATATATCGA TCGC GAT GCGG TTTTTCCCGCCGCGC TERM 2598 2131814 - 2131833 + r 70 -5 -4.38712 | gap 1, overlap 2131817 CACTGTGGTTCCCGA CGTCCATCA TGA TGGTGG-CG TTTTATCGCCATGCC S2256 2133306 - 2132110 - | ISSfl4 orf TERM 2599 2133143 - 2133168 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 2133123, overlap 2133129 2133144 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 2600 2133554 - 2133579 + r 73 -4.6 -4.81551 | overlap 2133555 TGGTTGTCCTGCTGA CGCCCGGAGA CGATCC TCTCAGGGCA TTTTTGATATGGGTA TERM 2601 2133671 - 2133685 + r 93 -10 -4.67353 | ATCTGCTGCGCCATC GCAACC CAC GGTTGC TTTTTGAGTCGCTGC TERM 2602 2134035 - 2134000 - R 93 -12 -3.75153 | gap 1, overlap 2134004 2134005 2134019 2134020 CGTGCGGAACGCAAA CACATTTCCGAAAGCGA AAC CCGCTTTCGGAA-CGCG ATGGAATATTCCGCT TERM 2603 2134032 - 2134004 - R 85 -12.5 -3.30106 | overlap 2134000 2134005 2134019 2134020 CGGAACGCAAACACA TTTCCGAAAGCGA AAC CCGCTTTCGGAAC GCGATGGAATATTCC TERM 2604 2134031 - 2134005 - R 90 -16 -2.57581 | overlap 2134004 2134000 2134019 2134020 GGAACGCAAACACAT TTCCGAAAGCGA AAC CCGCTTTCGGAA CGCGATGGAATATTC alkA 2137383 - 2136535 - | 3-methyl-adenine DNA glycosylase II TERM 2605 2137329 - 2137310 - G 73 -11.4 -2.62263 | ACCGTTTCCACACCA CTCACCGC ACGG GCGGCGAG AAATCCCAACATCCA TERM 2606 2137621 - 2137603 - R 70 -5.2 -4.4874 | opp_overlap 2137604, overlap 2137604 GCTAAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG TERM 2607 2138358 - 2138345 - R 71 -3.8 -4.81249 | GGCGAAACCGAAAAA GGCA TCGCCC TGCC GATCCTGCCGTGGTA TERM 2608 2138876 - 2138916 + r 80 -6.1 -4.83615 | gap 1, opp_overlap 2138877, overlap 2138877 TTTCGTTAAAAGAAA ATGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCAG TTTTTCTGCCGCCTG TERM 2609 2138915 - 2138877 - R 100 -9.6 -5.07652 | gap 1, opp_overlap 2138877 2138876 TTCGTTAAAAGAAAA TGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCA GTTTTTCTGCCGCCT TERM 2610 2138877 - 2138915 + r 75 -9.6 -3.49687 | gap 1, opp_overlap 2138877, overlap 2138876 TTCGTTAAAAGAAAA TGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCA GTTTTTCTGCCGCCT S2261 2141579 - 2140818 - | hypothetical protein TERM 2611 2141084 - 2141068 - G 71 -9.5 -3.53444 | TCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC GGCATCTTCATCGGT TERM 2612 2141315 - 2141294 - G 72 -5.2 -4.56597 | gap 1, overlap 2141296 CCGCCTCGGCAAAAA GTCGCTGAC GAACG GTCAGC-AC AATATCCGTGGCGAG TERM 2613 2141591 - 2141564 - G 74 -8.4 -3.92373 | overlap 2141567 CAGCGGATGCATAAA CCAGACGCCAGC TCAC ACTGACGTCCAG CCTTTTGGCGCTTCC S2262 2142235 - 2141576 - | hypothetical protein TERM 2614 2142047 - 2142057 + g 72 -5.4 -4.56597 | GAACGTCACAATGCC GAGT TCC ACTC TTTTTAAAGCCAGCG TERM 2615 2142832 - 2142807 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 2142815, overlap 2142808 2142822 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 2616 2143812 - 2143840 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA issfl4 2142669 - 2143865 + | ISSfl4 orf TERM 2617 2144344 - 2144322 - f 72 -10.6 -2.93853 | opp_overlap 2144322 2144323, overlap 2144321 TGTTGGTAACCAAAT CTCCAGTGGT GAT ACCACCGGAA TTGTGGTGATCACCC TERM 2618 2144916 - 2144905 - f 80 -5.8 -5.09173 | opp_overlap 2144915 GAATACGCGAAAAAA GGAG CACG CTCC TGATGCAGGTGTTAC TERM 2619 2144944 - 2144963 + F 72 -6.4 -4.33819 | opp_overlap 2144946 TACCCCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 2620 2144980 - 2145006 + F 71 -9.5 -3.13403 | gap 1, overlap 2144979 TTATTATGCGTCCTG TCGCCACCA-CG CTGC TGATGGTGGCGA TCTTACTCGCCGGGA TERM 2621 2146225 - 2146203 - f 73 -4.1 -4.7657 | gap 1 GAAAAAGGCGAAAAA CCGTTG-GCG GCGG CGCTCAAGGG CGCAGGTGAAATCGG TERM 2622 2148525 - 2148559 + G 73 -11.4 -2.65815 | opp_overlap 2148547 2148548, overlap 2148516 TTCGCCTCGACGCAG CTGGCTCCGACGATTT CGC AAATCGACGGTGTCGG TGATGTCGATGTCGG TERM 2623 2148773 - 2148751 - g 78 -7.6 -4.30416 | opp_overlap 2148753 2148764, overlap 2148753 2148764 2148767 ACGATGAACTGAAAA CCGCCGCTGA ATA TCAGCCGCTG ATTATTCACTACAAC TERM 2624 2150520 - 2150559 + G 81 -9.3 -4.07568 | gap 2 ACCCAGCTTGGTGTG CCTTCGACGGTGCGCGGCA GTTT TGCCG-GCACGG-CGCAGG TTTTCCAGGAGACGA TERM 2625 2150805 - 2150789 - g 77 -3 -5.07486 | gap 1, opp_overlap 2150789 2150791, overlap 2150791 CATCGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG yegO 2148042 - 2151107 + | multidrug efflux system subunit MdtC yegB 2151108 - 2152523 + | multidrug efflux system protein MdtE TERM 2626 2152843 - 2152799 - g 78 -8.4 -4.20025 | gap 1, opp_overlap 2152805, overlap 2152795 AATTCGGAAGATAAA CCCGGCCCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAGTTCTGG GTGGTCGATCAAAAC TERM 2627 2152805 - 2152837 + G 80 -12 -3.37975 | gap 1, opp_overlap 2152795 2152799 GAAGATAAACCCGGC CCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAG TTCTGGGTGGTCGAT baeS 2152520 - 2153923 + | signal transduction histidine-protein kinase BaeS TERM 2628 2154354 - 2154365 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCATG TERM 2629 2154572 - 2154540 - g 75 -4.7 -4.81551 | CAGCCACATTAAAAA TCTGCGCCGCAAGCT GGA ATCTCTCGACGCCGA ACAGTCATTTATCCG baeR 2153920 - 2154642 + | DNA-binding transcriptional regulator BaeR TERM 2630 2154799 - 2154782 - f 71 -7.7 -3.84514 | opp_overlap 2154782, overlap 2154777 ACTTTAATCAGTAAA CAGCACC TTTA GATGCTG TTTTCGATAAGCAAT S2270 2154794 - 2155165 + | hypothetical protein TERM 2631 2156058 - 2156044 - g 73 -9.2 -3.69395 | overlap 2156041 TTTATGATCGAAGAA GCCCAG CGT CCGGGC GAGTATATGACCGCG TERM 2632 2156542 - 2156532 - g 78 -8.2 -4.24948 | TGAGCACATGGAAAA CGCC AAA GGCG AAGCTATGCCGGTCG yegQ 2155312 - 2156673 + | hypothetical protein TERM 2633 2156807 - 2156838 + T 100 -8.1 -5.28176 | overlap 2156810 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTGTACATAAG TERM 2634 2156810 - 2156835 + T 93 -9.8 -4.73105 | overlap 2156807 GGAACCACCTCCTTA GCCTGTGTAA TCTCCC TTACACGGGC TTATTTTTTGTACAT S2273 2157392 - 2157015 - | hypothetical protein TERM 2635 2158220 - 2158206 - g 71 -2.7 -4.77757 | opp_overlap 2158210 CCGGAAAAATTAAAA GCCGC GCTGG GTGGC GTCTCTTACATCATT S2274 2157738 - 2158637 + | lipid kinase TERM 2636 2158712 - 2158668 - T 86 -13 -3.39595 | gap 1, opp_overlap 2158685 TTGAACCAGGGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTTATCCGGCA-TACAGA ACAATACTACACCGT gatR 2159498 - 2158719 - | galactitol utilization operon repressor TERM 2637 2159341 - 2159354 + g 74 -2.3 -5.06414 | opp_overlap 2159340, overlap 2159342 GCACCGCCATGAAAG CGCGT AACC ACGCC TTTTTGTTCGAGAAA TERM 2638 2159568 - 2159595 + r 76 -9.1 -3.74693 | gap 1, opp_overlap 2159567 2159569 2159570, overlap 2159569 TCTGTTTTGCACAAT AC-CGGGCCAGC ATCAC GCTGGCCCGCGG TTTCATGGAATGAGC TERM 2639 2159593 - 2159569 - R 83 -13.5 -3.21276 | opp_overlap 2159568 2159569, overlap 2159567 2159570 CTGTTTTGCACAATA CCGGGCCAGCA TCA CGCTGGCCCGC GGTTTCATGGAATGA TERM 2640 2159569 - 2159594 + r 79 -12.6 -2.84602 | gap 1, opp_overlap 2159569 2159567 2159570, overlap 2159568 CTGTTTTGCACAATA C-CGGGCCAGC ATCAC GCTGGCCCGCG GTTTCATGGAATGAG TERM 2641 2159592 - 2159570 - R 95 -17 -2.52623 | opp_overlap 2159569 2159568, overlap 2159569 2159567 TGTTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCATGGAATG gatD 2160638 - 2159598 - | galactitol-1-phosphate dehydrogenase S2278 2161174 - 2160671 - | IS1 orfB S2279 2161368 - 2161093 - | IS1 orfA gatC 2162818 - 2161463 - | PTS system galactitol-specific enzyme IIC gatB 2163106 - 2162822 - | galactitol-specific PTS system component IIB gatA 2163589 - 2163137 - | galactitol-specific PTS system component IIA gatZ 2164861 - 2163599 - | putative tagatose 6-phosphate kinase 1 gatY 2165744 - 2164890 - | tagatose-bisphosphate aldolase TERM 2642 2165889 - 2165868 - R 100 -13.7 -5.58209 | TGAAAGGCAAAAAAA CGGCCTCCC GATA GGGAAGCCG TAGCAAAGTGCGCGT S2285 2167104 - 2166052 - | fructose-bisphosphate aldolase TERM 2643 2167460 - 2167448 - H 74 -3.3 -5.06414 | overlap 2167452 CGCCTTTAACAAAAA CGTAC TAG GTCCG ACCTCGAAGATTGCG TERM 2644 2168006 - 2167988 - H 70 -9.6 -2.98823 | opp_overlap 2167972, overlap 2167990 TGGCGGCGACACAGA CACCATAG GTG CTATGGCG ACGGCGATTTGCGGC TERM 2645 2168211 - 2168241 + G 80 -11.9 -3.33162 | gap 1, overlap 2168205 CGGTGATGGTCGTCG GCG-CGGCGGTCAT TGAC GTGATCGCCGACGC TTATGCCCTCCCCTG S2287 2168144 - 2169109 + | putative kinase yegW 2169829 - 2169083 - | putative transcriptional regulator TERM 2646 2169144 - 2169192 + g 93 -11 -4.39568 | opp_overlap 2169144, overlap 2169146 ATGCTGTACTCAATA GGCCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGGTA TTTTGCTATCTAACT TERM 2647 2169146 - 2169190 + g 100 -15.8 -3.79993 | opp_overlap 2169144, overlap 2169144 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA TERM 2648 2169697 - 2169728 + g 83 -5.1 -5.12707 | gap 1, opp_overlap 2169697 2169696 CACCGGGCAAAATAT TGCCATGCTCCAGC ACCCC GCTGC-GCACGGCA TTTTTTACCGTTTCG TERM 2649 2169778 - 2169760 - G 78 -8.8 -4.25401 | CAAACTTAATATAAA GCGGCG TGTTATC CGCCGC TAAAATACGCTCGTT yegX 2170698 - 2169877 - | hypothetical protein thiD 2171563 - 2170763 - | phosphomethylpyrimidine kinase TERM 2650 2171229 - 2171215 - G 73 -9.2 -3.66178 | opp_overlap 2171216 2171218, overlap 2171200 CCGCCGAAGGTGAAA GCAGCG GGT CGCCGC TTTTTGCCAGCATAA TERM 2651 2171218 - 2171229 + g 77 -7.2 -4.57569 | opp_overlap 2171200 2171215, overlap 2171216 CCGAAGGTGAAAGCA GCGG GTCG CCGC TTTTTGCCAGCATAA thiM 2172348 - 2171560 - | hydroxyethylthiazole kinase yohL 2172843 - 2172571 - | hypothetical protein TERM 2652 2173878 - 2173896 + r 73 -7.4 -4.08919 | CTCTCTGCTCGCTAA GGATGCTT TTA GGGCATCC TTTCATTTACACTTT TERM 2653 2174378 - 2174358 - R 100 -11.1 -5.42259 | overlap 2174359 TCATCGCTAAAAAAA GCCCCCTCA TCA TGAGGGGGA AATGCAGACACCTTG TERM 2654 2174377 - 2174359 - R 100 -14.6 -3.84633 | overlap 2174358 CATCGCTAAAAAAAG CCCCCTCA TCA TGAGGGGG AAATGCAGACACCTT TERM 2655 2175180 - 2175192 + r 79 -4.1 -5.14163 | GCTCTGATTATTTGA CAACG TGA TGTTG TTTTTATTGGTCCAT yehB 2177963 - 2175483 - | putative outer membrane protein TERM 2656 2178696 - 2178677 - R 100 -10 -4.98531 | opp_overlap 2178676 CTCTTAAATTAAAAA GCCGCCAT GGGG ATAGCGGC CATGTTTATTACCTG yehD 2179258 - 2178734 - | putative fimbrial-like protein TERM 2657 2179518 - 2179489 - R 100 -15.3 -5.5353 | opp_overlap 2179496 GATATCAATAAAAAA GACGAAATCATTT ATAT AAATGATTTCGTC GGTAATGACTCCAAC S2299 2180037 - 2179534 - | IS1 orfB S2300 2180231 - 2179956 - | IS1 orfA yehE 2180609 - 2180328 - | hypothetical protein TERM 2658 2180841 - 2180809 - R 80 -6.3 -4.85782 | TGCGGCAAAAACAAA TACACCGCATCAATA TAA CATCTCTGCGGTGTA TGAAGAATAACCAGA mrp 2181980 - 2180871 - | putative ATPase TERM 2659 2182479 - 2182462 - g 93 -8.5 -4.86731 | TCGCCTGAAAGAAAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 2660 2182524 - 2182511 - g 70 -3.8 -4.60487 | opp_overlap 2182516 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTGAA TERM 2661 2183153 - 2183141 - g 76 -9.1 -3.73775 | opp_overlap 2183137 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG metG 2182112 - 2184145 + | methionyl-tRNA synthetase TERM 2662 2184157 - 2184176 + F 100 -10.7 -5.01553 | ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT TERM 2663 2187651 - 2187620 - f 100 -13.7 -3.84961 | GATCGAATGACGAAA GCCTGCGCTGCGT TCCCAC ACGCAGCACTGGC AGCACTGGCGGAACT TERM 2664 2188240 - 2188230 - f 72 -5.4 -4.40993 | opp_overlap 2188224, overlap 2188224 GAGAAAGCAGTAAAA GCAT GGA ATGC CCTTACTCTATCTCC TERM 2665 2191233 - 2191220 - f 79 -4.5 -5.10767 | CATCGAAGACAAAAA GCTGC CTGC ACAGC AAAAAGCTCGAGATG TERM 2666 2192533 - 2192557 + F 71 -7.1 -4.19258 | opp_overlap 2192532 2192548, overlap 2192534 AACAACTGAAAACGT TCTGCCAGC CACAAAC GCTGGCAGC TTTTGCCTGGGATCT TERM 2667 2192534 - 2192556 + F 73 -10.6 -3.11073 | opp_overlap 2192532 2192548, overlap 2192533 ACAACTGAAAACGTT CTGCCAGC CACAAAC GCTGGCAG CTTTTGCCTGGGATC TERM 2668 2193808 - 2193785 - f 84 -8.1 -4.72007 | opp_overlap 2193786, overlap 2193786 TTCCATTAAAACAAA GCGGGCAGT GATGCG ACTGCCCGT TATCTACACGACTTA TERM 2669 2193786 - 2193807 + F 86 -11.6 -3.48772 | opp_overlap 2193786 2193785 TCCATTAAAACAAAG CGGGCAGT GATGCG ACTGCCCG TTATCTACACGACTT TERM 2670 2193807 - 2193786 - f 82 -11.6 -3.42481 | opp_overlap 2193786, overlap 2193785 TCCATTAAAACAAAG CGGGCAGT GATGCG ACTGCCCG TTATCTACACGACTT TERM 2671 2194197 - 2194171 - f 79 -10.3 -3.51633 | opp_overlap 2194159 2194156, overlap 2194151 2194149 ATATACTCTAGATAA TTCAAGTCGCA GCACA TGCAACTTGAA GTATGACGAGTATAG TERM 2672 2194224 - 2194242 + F 73 -10.3 -3.11732 | opp_overlap 2194224 2194223 ATAGCTTTATTAAAG GGGGGAA CGGTA TTCCCCC TTAGATGCGTTTCAA TERM 2673 2194242 - 2194224 - f 74 -11 -2.84229 | opp_overlap 2194224, overlap 2194223 ATAGCTTTATTAAAG GGGGGAAC GGT ATTCCCCC TTAGATGCGTTTCAA TERM 2674 2194640 - 2194682 + F 72 -10.2 -2.90725 | opp_overlap 2194640 2194638, overlap 2194633 2194645 2194654 TTAGGCCTGAAAATA GTAAATAAAAGAACCTGC CTCACCA GCAGTTTTTTTTATTTAC TGTGATCTGCTTTCC TERM 2675 2194654 - 2194668 + F 100 -2.8 -6.25578 | opp_overlap 2194640 2194638, overlap 2194645 2194640 2194633 AGTAAATAAAAGAAC CTGC CTCACCA GCAG TTTTTTTTATTTACT yehL 2194722 - 2195876 + | hypothetical protein yehM 2195887 - 2198166 + | hypothetical protein yehP 2198159 - 2199295 + | hypothetical protein TERM 2676 2199340 - 2199359 + G 70 -4.2 -4.63218 | opp_overlap 2199326 2199323 2199322, overlap 2199341 ACACCGCAGGCACTG ACGGCGTT AAGC AATGCCGG TTTTGTTAAGCGCAG TERM 2677 2200065 - 2200051 - g 77 -11.4 -3.14211 | AGCCGCGCGCAGCAA GCAGCG GAA CGCTGC AGCTGGCGATGGGTG TERM 2678 2200898 - 2200910 + G 75 -5.5 -4.71426 | CCGTGTGTCTGGTTT CTGGC TTT GTCAG TTTTGTTGATGGGCA TERM 2679 2201155 - 2201168 + G 75 -4.5 -4.85599 | opp_overlap 2201154, overlap 2201154 TTGCTGGCGAATGAC CTCAC CGCG GTGGG TTTTTATCGGCTGGC yehQ 2199292 - 2201295 + | hypothetical protein TERM 2680 2201374 - 2201390 + T 77 -10.9 -3.22298 | opp_overlap 2201370 TATCCTATATAGCCC CTGGTGA GAG TCACCAG TTGGTAATGACTCCA S2317 2201911 - 2201408 - | IS1 orfB S2318 2202105 - 2201830 - | IS1 orfA TERM 2681 2202315 - 2202289 - g 76 -8 -4.29073 | GAAGAATCGAAGAAA TTCAGCGCCAAT CTG AACGGCACTGAA ATTGCCATTACCTAT yehR 2202196 - 2202657 + | hypothetical protein S2321 2203381 - 2202878 - | IS1 orfB S2322 2203575 - 2203300 - | IS1 orfA yehT 2204710 - 2203991 - | putative two-component response-regulatory protein YehT yehU 2206392 - 2204707 - | putative 2-component sensor protein TERM 2682 2205355 - 2205373 + g 70 -5.8 -4.18488 | AAGCAGTTGCGCAAT CCCCTCGC CCA GCGTGCGG TTTATTGAACTGAAT TERM 2683 2206610 - 2206585 - H 72 -9.1 -3.61398 | opp_overlap 2206585 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 2684 2206585 - 2206610 + H 100 -9.8 -5.61596 | opp_overlap 2206585 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 2685 2207956 - 2207927 - H 89 -9.3 -4.59109 | overlap 2207929 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACCCTATAGATGCA TERM 2686 2207954 - 2207929 - H 100 -16.3 -3.90762 | overlap 2207927 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACCCTATAGATG TERM 2687 2208152 - 2208136 - H 72 -5.1 -4.62302 | overlap 2208138 CAACATTTTTAAAAA TCGACGA AGA TCGTCCA GGAGCGCCGTTTTTC S2328 2208343 - 2208591 + | DNA-damage-inducible protein TERM 2688 2208660 - 2208692 + T 100 -8.4 -5.63236 | gap 1, opp_overlap 2208606 2208660 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT S2329 2208976 - 2208707 - | hypothetical protein TERM 2689 2209741 - 2209709 - R 86 -13.6 -3.16564 | gap 1, opp_overlap 2209709 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT TERM 2690 2209709 - 2209741 + r 89 -11.4 -4.08919 | gap 1, opp_overlap 2209709 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT S2331 2212205 - 2211660 - | hypothetical protein TERM 2691 2211724 - 2211701 - G 100 -13.8 -4.58395 | opp_overlap 2211700 2211697, overlap 2211702 CTGACTCCGGAAAAA CGGAGGCCCG CCCC CGGGCCTCCC CTGATTCATCCGTTT TERM 2692 2211723 - 2211702 - G 100 -17.3 -3.34716 | opp_overlap 2211700 2211697, overlap 2211701 TGACTCCGGAAAAAC GGAGGCCCG CCCC CGGGCCTCC CCTGATTCATCCGTT S2332 2213584 - 2212250 - | putative phage tail fiber protein TERM 2693 2213727 - 2213709 - R 73 -7.4 -4.13995 | overlap 2213712 TCGCGATAAATTAAA TCAGGAAG AAC CTTCCGGA GAGGCGGGCCATTCA S2333 2214197 - 2213709 - | putative phage tail fiber assembly protein S2334 2214367 - 2214257 - | putative phage tail fiber protein S2335 2214712 - 2214987 + | IS1 orfA S2336 2214906 - 2215409 + | IS1 B TERM 2694 2215433 - 2215446 + F 89 -6.7 -5.3104 | CATTACCGAAGTACT GTGCA TAAA TGCAC TTTTGTTTTTAGTCC S2337 2216108 - 2216434 + | IS629 orfA TERM 2695 2216750 - 2216738 - g 70 -4.8 -4.56597 | overlap 2216740 TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCGGCCGGAAAGCC S2338 2216670 - 2217317 + | IS629 orfB S2340 2217682 - 2217368 - | hypothetical protein S2341 2217875 - 2217982 + | hypothetical protein yehW 2218694 - 2217963 - | putative transport system permease protein TERM 2696 2218386 - 2218362 - G 72 -8.5 -3.83026 | TGGTTGCAGACCAAA GCCGATCACCG GAA CGGCAATCGCC AGCACTGCGACAGGC yehX 2219625 - 2218699 - | putative ATP-binding component of a transport system yehY 2220775 - 2219618 - | putative transport system permease protein TERM 2697 2220166 - 2220142 - G 90 -4.9 -5.39721 | TGAGCAGAGAAAAAA TTGCCCCCTGC CGC GCAGTGGAAAA GTAGCACCAGATGCC TERM 2698 2220602 - 2220588 - G 70 -5.6 -4.37886 | overlap 2220564 2220590 TTAGCGGGGACAAAA CAGGCT GTC AGCCAG GCGCAACCAACGCCC TERM 2699 2220714 - 2220704 - G 74 -8.2 -3.97368 | overlap 2220705 CGCGTAACTGATAAA CGGC AGC GCCG CTGCGATTGCCGTCA yehZ 2221699 - 2220782 - | putative transport system permease protein TERM 2700 2220859 - 2220876 + g 70 -3.5 -4.65895 | gap 1, overlap 2220855 CCACTGCAATGCTGG CATT-CAG TTG CTGCAATG TTTTTGCATCGAGGC TERM 2701 2221357 - 2221370 + g 73 -3.8 -4.84529 | overlap 2221349 AGATTAACTTGTTGT GCTC CGCATC GAGC TTTTTGACTTTCTCG TERM 2702 2221921 - 2221939 + r 74 -10.2 -3.15579 | opp_overlap 2221921 TGAACATCAGGCAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC TERM 2703 2221939 - 2221921 - R 93 -12.4 -3.71607 | opp_overlap 2221921 TGAACATCAGGCAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC bglX 2224248 - 2221951 - | beta-D-glucoside glucohydrolase TERM 2704 2222099 - 2222117 + g 75 -6.6 -4.37658 | CTGACAGTCTGAGTT TCGCCCGG TTT CAGGGTGA TTTTCTCAAAGCCTT TERM 2705 2225177 - 2225190 + G 70 -6.7 -4.01703 | opp_overlap 2225176, overlap 2225176 CCGCACGTTATAACG CCGAT CCGG ATCGG TTATTTGAATCTTCT dld 2224444 - 2226159 + | D-lactate dehydrogenase TERM 2706 2226191 - 2226163 - T 84 -7.6 -4.74801 | gap 2, opp_overlap 2226164, overlap 2226164 2226166 GAAGTGGAGTAAAAA TTACGGATGGCAGA GTA TC-GCCATCCG-AA TTCACTTAATCGTTC TERM 2707 2226191 - 2226164 - T 70 -9.2 -3.44158 | gap 1, opp_overlap 2226164, overlap 2226163 2226166 AAGTGGAGTAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGAA TTCACTTAATCGTTC TERM 2708 2226189 - 2226166 - T 79 -11.8 -3.28472 | gap 1, opp_overlap 2226164, overlap 2226163 2226164 GTGGAGTAAAAATTA CGGATGGCAGA GTA TC-GCCATCCG AATTCACTTAATCGT pbpG 2227138 - 2226197 - | D-alanyl-D-alanine endopeptidase TERM 2709 2226225 - 2226241 + g 100 -10.8 -5.8096 | overlap 2226209 GCCGTCTGCCCCGCC GCCGCC ATTTG GGCGGC TTTTTGTTTTTTATA TERM 2710 2226742 - 2226752 + g 81 -8.2 -4.3739 | opp_overlap 2226727, overlap 2226731 GGTGCGCAAGGCTTG CCGC CGC GCGG TTTTCTGAAGACATC TERM 2711 2227290 - 2227255 - R 86 -11.2 -3.75015 | overlap 2227256 AGAATCGTGAGTAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAACG TCAAAGAACTTTCTA TERM 2712 2227289 - 2227256 - R 87 -14.7 -2.84527 | overlap 2227255 GAATCGTGAGTAAAT GCTGCATTGCTGACA TTTA CGCCAGCAATGCAAC GTCAAAGAACTTTCT yohC 2227890 - 2227303 - | hypothetical protein yohD 2228024 - 2228638 + | hypothetical protein TERM 2713 2228634 - 2228620 - T 80 -5.6 -5.06414 | GCGCGGGAAGAAAAA GCCGGA TAA TCAGGC GTAAAGCAGTTGCCA TERM 2714 2229655 - 2229641 - T 72 -9.2 -3.61398 | CTGCCCTTGCAATAA CAGGCC ATT GGCCCG CTCACGCAGCGCCGG TERM 2715 2231457 - 2231418 - T 83 -14.2 -2.71364 | overlap 2231406 TCACTGGCGCAAGGA GCGCGCAGGGGGCGAC CAATCGCC GCCGCCCCCTGCCCCC CCGGGCTCTGGCGAA yohI 2232630 - 2231683 - | tRNA-dihydrouridine synthase C TERM 2716 2232671 - 2232650 - H 100 -8.1 -5.42259 | gap 1, opp_overlap 2232653, overlap 2232651 2232653 TCACCCGCAAAAAAA TGAGGCGCTA TGT TAGCGCCT-A TGGTCAGCGGATTAA TERM 2717 2232671 - 2232651 - H 80 -9.7 -3.84633 | opp_overlap 2232653, overlap 2232650 2232653 CACCCGCAAAAAAAT GAGGCGCTA TGT TAGCGCCTA TGGTCAGCGGATTAA TERM 2718 2232653 - 2232669 + H 79 -12.3 -2.78715 | opp_overlap 2232650 2232651 2232653 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAGCGGATT TERM 2719 2232669 - 2232653 - H 88 -12.3 -3.49966 | opp_overlap 2232653, overlap 2232650 2232651 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAGCGGATT TERM 2720 2232693 - 2232732 + H 73 -9.5 -3.32993 | gap 2, opp_overlap 2232698, overlap 2232698 2232700 GCGGATTAAAGGTCT GCA-A-AGAGGGATTGCTG CAAA CTGCAATCCCTCTCTATGC TTGATGTATGCCTGA TERM 2721 2232698 - 2232725 + H 85 -14.2 -3.0281 | opp_overlap 2232698, overlap 2232693 2232700 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 2722 2232725 - 2232698 - H 93 -14.2 -3.56594 | opp_overlap 2232698 2232693 2232700 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 2723 2232700 - 2232723 + H 75 -11 -3.06361 | opp_overlap 2232698, overlap 2232698 2232693 AAAGGTCTGCAAAGA GGGATTGCTG CAAA CTGCAATCCC TCTCTATGCTTGATG TERM 2724 2232925 - 2232944 + G 90 -9.3 -4.4959 | TTTCGTCCTGATTTA TGCCTGC CTGTAT GCAGGCA TTTTCATTGCTTCCC yohJ 2232869 - 2233267 + | hypothetical protein yohK 2233264 - 2233959 + | hypothetical protein cdd 2234089 - 2234973 + | cytidine deaminase TERM 2725 2235041 - 2235057 + F 89 -10.9 -4.15044 | TGGTGTCGAAATTCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC TERM 2726 2235714 - 2235724 + G 79 -4.6 -5.00884 | opp_overlap 2235714 CTTTATATTTTTAAA CGTG AAC CGCG TTTTTTAGGGCCGCT sanA 2235123 - 2235842 + | hypothetical protein TERM 2727 2235975 - 2235958 - g 75 -5.5 -4.60924 | opp_overlap 2235960, overlap 2235960 TAAACGGGTTAAAAA TGCACCG GAAC CGGTGTA TGTCTGGCGAGCAAA S2359 2235845 - 2236084 + | hypothetical protein TERM 2728 2236575 - 2236585 + G 85 -6.8 -4.76123 | overlap 2236534 CCCATTGATATCGGC CGCT TAC AGCG TTTTGTTACTGATTT TERM 2729 2237177 - 2237193 + G 85 -11.5 -3.68827 | AAAAGAGTTTGCCAG CGCCCGG GAG CTGGGCG TTTCGATCATCGATG S2360 2236278 - 2237516 + | putative oxidoreductase TERM 2730 2238142 - 2238131 - T 72 -5.8 -4.54821 | opp_overlap 2238131, overlap 2238114 ATCTTAATCAGAAAA TCGG TATG CCGA TCGTTAACGGTAAAT mglC 2239769 - 2238759 - | beta-methylgalactoside transporter inner membrane component TERM 2731 2239794 - 2239831 + r 91 -8.5 -4.96848 | opp_overlap 2239798 2239800 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGTTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2241305 - 2239785 - | galactose/methyl galaxtoside transporter ATP-binding protein TERM 2732 2240665 - 2240680 + g 78 -7.6 -4.38154 | opp_overlap 2240665 2240664 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGCGAGATAT TERM 2733 2241357 - 2241335 - R 100 -14.9 -3.88232 | opp_overlap 2241348, overlap 2241348 TTGGCCATACAATAA GGGCGCAGT AAACG ACTGCGCCC AATCAGTCTTATTTC mglB 2242364 - 2241366 - | galactose-binding transport protein; receptor for galactose taxis TERM 2734 2241467 - 2241483 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAGATCA galS 2243684 - 2242644 - | DNA-binding transcriptional regulator GalS yeiB 2244902 - 2243826 - | hypothetical protein TERM 2735 2244805 - 2244835 + g 71 -9.1 -3.44848 | gap 1, opp_overlap 2244808 2244809, overlap 2244803 2244809 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAGC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 2736 2244832 - 2244808 - G 78 -10.8 -3.51924 | gap 1, opp_overlap 2244805 2244803 2244809, overlap 2244809 GCGGGATTGAGATAA GCCGCCTTTGG TAGC CCAAAGGCG-C TGATGTTTAATAGCA TERM 2737 2244832 - 2244809 - G 70 -11 -2.7094 | opp_overlap 2244809 2244805 2244803, overlap 2244808 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA TERM 2738 2244809 - 2244832 + g 71 -11 -2.87501 | opp_overlap 2244808 2244809, overlap 2244805 2244803 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA folE 2245587 - 2244919 - | GTP cyclohydrolase I TERM 2739 2246687 - 2246702 + r 76 -11.8 -2.56271 | opp_overlap 2246683 2246684, overlap 2246686 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA TERM 2740 2246892 - 2246906 + r 77 -9.2 -3.87373 | CGGTGTTTTAGCCGT CGCGCT GTC GGCGCG TTTCTGCCCGGTATA TERM 2741 2248973 - 2248954 - R 100 -13.6 -4.75776 | AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA lysP 2250464 - 2248995 - | lysine transporter TERM 2742 2249892 - 2249857 - G 70 -6.8 -4.08945 | gap 1, opp_overlap 2249867 2249868, overlap 2249868 ATCATCGCCGCAAAA CCACCAG-CAAACGGCG CTT CGCCGATTGTCCAGTTG CTCCAGCCCGCAGGC TERM 2743 2249880 - 2249868 - G 84 -10.5 -3.83705 | opp_overlap 2249868 2249867, overlap 2249857 AAAACCACCAGCAAA CGGCG CTT CGCCG ATTGTCCAGTTGCTC yeiE 2251551 - 2250670 - | putative DNA-binding transcriptional regulator TERM 2744 2252347 - 2252321 - g 75 -6.6 -4.42386 | CCCGGATGCAGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 2745 2252619 - 2252601 - g 71 -2.2 -5.00884 | AGCGCGCTGAAAAAA GCTGGGGC GAA ACCTCTGC TGATGGCACTGGTAC yeiH 2251650 - 2252699 + | hypothetical protein nfo 2252773 - 2253630 + | endonuclease IV TERM 2746 2254034 - 2254018 - g 82 -9.3 -4.15044 | opp_overlap 2254016 2254023 2254026 TGCTCCTGGAAGAAA CGCGCCG TGC CGGCGTG AATGTCTCCGGCTGC yeiI 2253633 - 2254721 + | hypothetical protein yeiJ 2256027 - 2254777 - | putative transport system permease protein TERM 2747 2255401 - 2255386 - G 78 -9 -3.9122 | overlap 2255373 CAGGCGGGCAAACAA GATCCC GCCA GGGATC GCCATTAACGATGCC TERM 2748 2255522 - 2255558 + g 72 -7.3 -4.19735 | AATAATTCATTGCGA TTCAGACGATCGATAAA GGG TTTGACGATCGCCGGAA TTTCGTTTTGCCCGA TERM 2749 2255839 - 2255853 + g 71 -2.7 -4.82901 | overlap 2255829 CGCCATCACTTTGTG GACGC CAAAA GCGAC TTTTTCTGCGACCCA TERM 2750 2256115 - 2256080 - R 80 -9.6 -3.96148 | opp_overlap 2256082, overlap 2256082 TCTGCCCATCAGAAA TAGCCGGGCCTGCATC TTGC GATACTGTCCCGGCTT GTTATCAACACTTAA TERM 2751 2256082 - 2256113 + r 79 -10 -3.79678 | opp_overlap 2256080 2256082 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT TERM 2752 2256113 - 2256082 - R 88 -12.2 -3.57406 | opp_overlap 2256082, overlap 2256080 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT rihB 2257068 - 2256127 - | ribonucleoside hydrolase 2 TERM 2753 2256181 - 2256204 + g 90 -11.8 -3.92324 | opp_overlap 2256178 2256181 TAAGCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTGGTATTAGCGGG TERM 2754 2257276 - 2257302 + G 71 -2.1 -5.02074 | opp_overlap 2257276, overlap 2257281 TTGCTTTTCAACGGA TGTTTCAGCCG ATACG CGGCTGTTTCA TTTTTTAGCGCGTGA TERM 2755 2257281 - 2257297 + G 86 -9.4 -4.42765 | opp_overlap 2257276, overlap 2257276 TTTCAACGGATGTTT CAGCCG ATACG CGGCTG TTTCATTTTTTAGCG TERM 2756 2257340 - 2257354 + G 82 -7.8 -4.52589 | GTGCAGGAAGGGCAA CAGCCG TCA TGGCTG TTTTATCTGACGCGA yeiL 2257238 - 2257816 + | DNA-binding transcriptional activator YeiL yeiM 2259214 - 2257964 - | putative transport system permease protein TERM 2757 2258704 - 2258750 + g 83 -10.2 -4.07568 | overlap 2258707 CGGTAAACAACTCGT TGCGATTCACGCGATCGATAAA CGG TTTAACGATCGCCGGGATCTCA TTTTGCCCGAGGAAA TERM 2758 2258707 - 2258747 + g 72 -10.5 -3.08032 | overlap 2258704 TAAACAACTCGTTGC GATTCACGCGATCGATAAA CGG TTTAACGATCGCCGGGATC TCATTTTGCCCGAGG TERM 2759 2259202 - 2259219 + g 70 -5.7 -4.30014 | TCCCCACAACACTTC TCATTAT ATCC ATAATGA TTTTCCCTTCATGCC TERM 2760 2259241 - 2259258 + r 81 -8.3 -4.39287 | opp_overlap 2259241 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA TERM 2761 2259258 - 2259241 - R 83 -10.5 -3.74693 | opp_overlap 2259241 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA yeiN 2260246 - 2259308 - | hypothetical protein TERM 2762 2259347 - 2259359 + g 73 -9.1 -3.61398 | opp_overlap 2259355, overlap 2259349 TTTGGCAATTTCACT CGCCA GAA TGGCG TTGTTGAACACCAGC TERM 2763 2259913 - 2259923 + g 74 -3.2 -5.00616 | TCGTTGAAGCCACAG TGGT TGC GCCA TTTTTTCCGGCGGCA yeiC 2261175 - 2260234 - | hypothetical protein TERM 2764 2261002 - 2261029 + g 72 -6.2 -4.42619 | opp_overlap 2260982 TACGGCGCTCAGTAG CCAGGCTTTGTT ACCC AGCAACGCCAGG TTTTGTGCAATATTG TERM 2765 2261441 - 2261422 - R 100 -9.3 -5.28683 | AGGAACACTAAAAAA GGGCAGA AAATAA TCTGCCC TTGAGGAAATAACCT TERM 2766 2261553 - 2261593 + r 78 -6.1 -4.66318 | opp_overlap 2261557, overlap 2261554 2261555 TCTCTTTGCGCTCAT CAAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACACC TTTTATTACGCTGCT TERM 2767 2261554 - 2261592 + r 73 -9.6 -3.39068 | opp_overlap 2261557, overlap 2261553 2261555 CTCTTTGCGCTCATC AAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACAC CTTTTATTACGCTGC TERM 2768 2261555 - 2261591 + r 81 -13.1 -2.62958 | opp_overlap 2261557, overlap 2261554 2261553 TCTTTGCGCTCATCA AATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACA CCTTTTATTACGCTG TERM 2769 2261589 - 2261557 - R 100 -17.9 -3.72576 | opp_overlap 2261555 2261554 2261553 TTTGCGCTCATCAAA TGTTACAGGGCAGGA AAT TTCTGCCCTGTAACA CACCTTTTATTACGC fruA 2263290 - 2261599 - | fructose-specific PTS system IIBC component fruK 2264245 - 2263307 - | 1-phosphofructokinase fruB 2265375 - 2264245 - | bifunctional fructose-specific PTS IIA/HPr protein yeiO 2265743 - 2266921 + | putative transport S2385 2267418 - 2266915 - | IS1 orfB S2386 2267612 - 2267337 - | IS1 orfA TERM 2770 2267930 - 2267911 - H 71 -10 -3.27525 | gap 1, overlap 2267906 2267925 GGGCTGGAAATTGAA GGGGCAGTG CAA CAC-GCCCC GCAACCCGGACGGCA yeiP 2268106 - 2268678 + | elongation factor P TERM 2771 2268718 - 2268699 - f 79 -7.8 -4.42386 | opp_overlap 2268699 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA TERM 2772 2268699 - 2268718 + F 100 -10 -5.46129 | opp_overlap 2268699 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA yeiQ 2268901 - 2270367 + | putative oxidoreductase TERM 2773 2270378 - 2270416 + F 76 -8.1 -4.03183 | opp_overlap 2270385 TTTAACGATTTCTGC GGTTAAAGCGGATGAAG CTCAC CTTCGTCCGCTCTCCCC TTCTCTTTTCTGCCT TERM 2774 2270409 - 2270385 - f 75 -10 -3.53091 | opp_overlap 2270378 ATTTCTGCGGTTAAA GCGGATGAAG CTCAC CTTCGTCCGC TCTCCCCTTCTCTTT yeiR 2270485 - 2271471 + | hypothetical protein TERM 2775 2271531 - 2271521 - g 73 -4 -4.81734 | opp_overlap 2271521 AAATATGATTAAAAA TTTG CCG CAAA TAGTGTTGTTGAATA TERM 2776 2271771 - 2271761 - g 75 -4.6 -4.86731 | CTGGCTGAAAGAAAA CGCC CCT GGCA GACGACGTATCGTGA S2390 2271510 - 2272223 + | hypothetical protein TERM 2777 2272572 - 2272583 + F 79 -2.2 -5.61596 | AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT TERM 2778 2273111 - 2273124 + G 70 -6.7 -4.08557 | overlap 2273110 GTTTGTCCATGCTTC CACCA GCAG TGGTG TTATTATTTCCAGCA spr 2272635 - 2273201 + | putative outer membrane lipoprotein TERM 2779 2273268 - 2273251 - f 86 -11.3 -3.77219 | opp_overlap 2273251 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 2780 2273251 - 2273268 + F 100 -11.3 -5.85244 | opp_overlap 2273251 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 2781 2274086 - 2274098 + G 70 -4.1 -4.72272 | CTGGACATGGAACGA TGTGT GGT ACGCA TTTTTACTGGGCGGC TERM 2782 2274664 - 2274682 + G 71 -9.6 -3.50447 | overlap 2274652 2274676 GCGCGCTTATCTATC TTGAGCGT TTT ACGCTCGA TTATCTGAAAATTGA rtn 2273382 - 2274938 + | hypothetical protein TERM 2783 2275915 - 2275896 - g 79 -2.2 -5.25803 | gap 1, overlap 2275898 2275900 AATTTCGATAAAAAA TACATCATC AAA GATGA-GCA AAAGAACGAATCAGC TERM 2784 2276054 - 2276036 - g 100 -13.2 -3.75105 | TGAATGGATGAACAA GGCGTTGT TTT ACAACGCC TGGAGTCGCACGAAC yejA 2275020 - 2276834 + | hypothetical protein TERM 2785 2277680 - 2277725 + G 80 -5.3 -5.02074 | overlap 2277693 TATGTTCCGCAACGC CATGCTGCTGGTGATTGCCGG TTTT CCGGCGACGTTTATCAGCATG TTTTTTACCGGCTCG yejB 2276835 - 2277929 + | putative transport system permease protein TERM 2786 2278794 - 2278814 + G 70 -11.2 -2.73875 | overlap 2278791 TCGGTCTACCGCTCG GTTCACCG TCACT CGGTGAAC TGCTGTTACAAGGGA yejE 2277929 - 2278954 + | putative transport system permease protein yejF 2278956 - 2280545 + | putative ATP-binding component of a transport system yejG 2280893 - 2280549 - | hypothetical protein bcr 2282416 - 2281226 - | bicyclomycin/multidrug efflux system rsuA 2283139 - 2282444 - | 16S rRNA pseudouridylate synthase A yejH 2283289 - 2285049 + | putative ATP-dependent helicase rplY 2285174 - 2285458 + | 50S ribosomal protein L25 TERM 2787 2285474 - 2285503 + T 93 -15.9 -2.90219 | opp_overlap 2285481, overlap 2285481 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCG GCGGGGTTTTTTG TATCTGCAGATTATG TERM 2788 2285481 - 2285496 + T 100 -11.8 -5.4251 | opp_overlap 2285481, overlap 2285474 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTATCTGCA TERM 2789 2285496 - 2285481 - T 100 -11.8 -5.06103 | opp_overlap 2285481 2285474 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTATCTGCA yejK 2286604 - 2285597 - | nucleoid-associated protein NdpA TERM 2790 2286746 - 2286735 - H 100 -5.8 -6.04378 | opp_overlap 2286735 2286745 AAAGCAGAAAAAAAA CCGT TGCT ACGG TAATATGTTGCCCTT yejL 2286786 - 2287013 + | hypothetical protein TERM 2791 2287431 - 2287465 + G 81 -6.5 -4.78572 | gap 1, overlap 2287434 AAATGAGATGGCGCG CGACTGGCA-GCTGAT GTTC ATCAGCGTGCCGGTTA TTTTATTGCTTGAAC TERM 2792 2287434 - 2287462 + G 93 -10.4 -4.48997 | gap 1, overlap 2287431 TGAGATGGCGCGCGA CTGGCA-GCTGAT GTTC ATCAGCGTGCCGG TTATTTTATTGCTTG TERM 2793 2287870 - 2287883 + G 76 -8.1 -4.25104 | opp_overlap 2287863 2287868, overlap 2287882 TTCGAGAAGCAGATG CCTGC GCTG GCAGG TTTTGCTGAGCAAAA yejM 2287033 - 2288793 + | putative sulfatase TERM 2794 2288779 - 2288819 + T 71 -9.9 -3.24825 | opp_overlap 2288776, overlap 2288777 2288781 ACAGACGAGAAGCGT TTTATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAATA TCTTACTTGCAATCG TERM 2795 2288781 - 2288817 + T 81 -12.5 -3.18634 | opp_overlap 2288776, overlap 2288779 2288777 AGACGAGAAGCGTTT TATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAA TATCTTACTTGCAAT TERM 2796 2288978 - 2288962 - T 100 -8 -5.4756 | opp_overlap 2288954 2288962 AATCCCAAGAAAAAA CCAACC CTTAC GGTTGG TTTTTTTATATCTGC TERM 2797 2288962 - 2288978 + T 100 -8 -5.76633 | opp_overlap 2288962, overlap 2288954 AATCCCAAGAAAAAA CCAACC CTTAC GGTTGG TTTTTTTATATCTGC TERM 2798 2289005 - 2289036 + T 93 -8.8 -4.73682 | opp_overlap 2289009, overlap 2289009 CTGCAATTAATTCGA TAAACAGACCGTGA CACA TCACAGCCTGTTTA TTTTCTGTTATCAGA TERM 2799 2289009 - 2289032 + T 76 -5.2 -4.89519 | opp_overlap 2289009, overlap 2289005 AATTAATTCGATAAA CAGACCGTGA CACA TCACAGCCTG TTTATTTTCTGTTAT TERM 2800 2289032 - 2289009 - T 80 -9.6 -3.93638 | opp_overlap 2289005 2289009 AATTAATTCGATAAA CAGACCGTGA CACA TCACAGCCTG TTTATTTTCTGTTAT yejO 2291557 - 2289047 - | putative ATP-binding component of a transport system TERM 2801 2289786 - 2289813 + g 70 -9.8 -3.23853 | overlap 2289784 TGCTCAAAACCAGCT CCCGCATCAGTG GTCA CGTTGTTGCGGG TGTTAATTGCCGAAC narP 2291958 - 2292605 + | transcriptional regulator NarP TERM 2802 2292635 - 2292609 - T 91 -8 -5.18726 | opp_overlap 2292607, overlap 2292611 GGGGCACAATAAAAA TAGCCCGATG GATTTAT CATCGGGCTG AGATTTATGACAAAC TERM 2803 2292633 - 2292611 - T 90 -10.6 -4.22377 | opp_overlap 2292607, overlap 2292609 GGCACAATAAAAATA GCCCGATG GATTTAT CATCGGGC TGAGATTTATGACAA TERM 2804 2292785 - 2292812 + T 89 -6.3 -5.35815 | gap 1, overlap 2292786 2292787 ACTTTGTCATCAGTC TA-GCCCGATGG CATCA CCATCGGGCCTC TTTTTATTTACTCTC TERM 2805 2292786 - 2292810 + T 91 -11.4 -4.29436 | overlap 2292785 2292787 CTTTGTCATCAGTCT AGCCCGATGG CATCA CCATCGGGCC TCTTTTTATTTACTC TERM 2806 2292787 - 2292809 + T 90 -14.9 -3.16035 | overlap 2292786 2292785 TTTGTCATCAGTCTA GCCCGATGG CATCA CCATCGGGC CTCTTTTTATTTACT ccmH 2293868 - 2292816 - | subunit of heme lyase TERM 2807 2293875 - 2293863 - G 77 -3.3 -5.07486 | CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT dsbE 2294422 - 2293865 - | disulfide oxidoreductase ccmF 2296362 - 2294419 - | cytochrome c-type biogenesis protein TERM 2808 2294881 - 2294857 - G 71 -9.3 -3.54638 | ATAATTCTGGCTAAA GGCAATGCCAA CAA TTGTCACTGCC AGCCCCAGGTGAGCC ccmE 2296838 - 2296359 - | cytochrome c-type biogenesis protein CcmE ccmD 2297044 - 2296835 - | heme exporter protein C TERM 2809 2297002 - 2296991 - G 95 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2297778 - 2297041 - | heme exporter protein C TERM 2810 2297198 - 2297163 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2297163 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2298482 - 2297820 - | heme exporter protein B, cytochrome c-type biogenesis protein TERM 2811 2297951 - 2297935 - G 81 -10.8 -3.57797 | GGCAAATGCATAGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG ccmA 2299102 - 2298479 - | cytochrome c biogenesis protein CcmA napC 2299717 - 2299115 - | cytochrome c-type protein NapC TERM 2812 2299541 - 2299567 + g 81 -6.6 -4.66163 | GCGCATTTCGTGGCA GCTAATGCAGAA CTC TTCGGTATTGGC TTTTTCCATCCCGGT napB 2300176 - 2299727 - | diheme cytochrome c550 TERM 2813 2299841 - 2299818 - G 70 -5.9 -4.18674 | overlap 2299819 TGCAGACAGAAATAA CGACGCGGA GCCACT TCCGCGCCC ACTTTGCCGTCGCTG napH 2301036 - 2300173 - | quinol dehydrogenase membrane component TERM 2814 2300509 - 2300485 - G 86 -3.5 -5.35815 | overlap 2300499 TAGATCAAATAAAAA CAGCGCG AGAATAAGCAG CGCGCCG CTGCCGAAGCCCATT TERM 2815 2300513 - 2300499 - G 88 -11.4 -3.80174 | overlap 2300485 ACAGCGCGAGAATAA GCAGCG CGC CGCTGC CGAAGCCCATTACCA napG 2301718 - 2301023 - | quinol dehydrogenase periplasmic component TERM 2816 2301580 - 2301611 + g 81 -12.4 -3.21276 | gap 1, overlap 2301584 TGGCTCCGGGCGGGC GCAA-CCGCACGC CAGATGC GCGTGCGGTTTGC TGTTGTAACCCCAGC TERM 2817 2301584 - 2301606 + g 90 -12 -3.97088 | overlap 2301580 TCCGGGCGGGCGCAA CCGCACGC CAGATGC GCGTGCGG TTTGCTGTTGTAACC napA 2304211 - 2301725 - | nitrate reductase napD 2304471 - 2304208 - | assembly protein for periplasmic nitrate reductase napF 2304955 - 2304461 - | ferredoxin-type protein TERM 2818 2305098 - 2305088 - H 71 -6.8 -4.08767 | CCGATCGGGGTAAAA CCTG TAG CAGG ATCAAAAGAGTGGCG eco 2305363 - 2305851 + | ecotin precursor TERM 2819 2307229 - 2307199 - T 80 -9.6 -3.92641 | overlap 2307200 2307203 AACGGTATTGATAAA TGAACGCGGAGTAC GCA GCACGCCGCGCTCG ACCTGGTGCGCCCAG TERM 2820 2307228 - 2307200 - T 82 -13.1 -2.95102 | overlap 2307199 2307203 ACGGTATTGATAAAT GAACGCGGAGTAC GCA GCACGCCGCGCTC GACCTGGTGCGCCCA TERM 2821 2307225 - 2307203 - T 82 -11.2 -3.61988 | overlap 2307200 2307199 GTATTGATAAATGAA CGCGGAGTAC GCA GCACGCCGCG CTCGACCTGGTGCGC yojI 2309458 - 2307815 - | multidrug transporter membrane component/ATP-binding component TERM 2822 2308080 - 2308090 + g 79 -2.4 -5.28826 | opp_overlap 2308079 2308081, overlap 2308071 GCCAGCGCCAGCAAC AGCG CCA CGCG TTTTTTCTGCCCTTT alkB 2310184 - 2309534 - | alkylated DNA repair protein ada 2311248 - 2310184 - | O6-methylguanine-DNA methyltransferase; transcription activator/repressor yojL 2312377 - 2311322 - | thiamine biosynthesis lipoprotein ApbE TERM 2823 2312474 - 2312447 - R 80 -12.8 -3.10622 | opp_overlap 2312454, overlap 2312454 TACGCTGAAAACAAT GAAAAAAGGGCC CGCA GGCCCTTTGTTC GATATCCATCGAGAT TERM 2824 2312454 - 2312467 + r 87 -9.5 -4.23213 | opp_overlap 2312454 2312447 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCCA TERM 2825 2312467 - 2312454 - R 100 -9.5 -5.43514 | opp_overlap 2312454, overlap 2312447 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCCA ompC 2313610 - 2312489 - | outer membrane porin protein C TERM 2826 2314011 - 2314029 + H 100 -11 -5.48303 | TTACCCCTATTTCAA CCGGATGC CTC GCATTCGG TTTTTTTACCCTTCT TERM 2827 2315715 - 2315689 - g 70 -5 -4.56978 | opp_overlap 2315697 CTGGTAAACAAGAAA CTCAAGCAGGCG CAG CGTCTGTATGAG AAAAACCAGCAGGGG yojN 2314348 - 2317020 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC rcsB 2317037 - 2317687 + | transcriptional regulator RcsB TERM 2828 2317697 - 2317730 + T 95 -14.7 -3.55622 | opp_overlap 2317688 2317707, overlap 2317698 2317710 GACTAATCATCTGTA GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA TTTGCACCGATTGCC TERM 2829 2317698 - 2317729 + T 100 -18.2 -2.73159 | opp_overlap 2317688 2317707, overlap 2317697 2317710 ACTAATCATCTGTAG GCCAGATAAGACGC GTTA GTGTCTTATCTGGC ATTTGCACCGATTGC TERM 2830 2317811 - 2317844 + T 95 -14.7 -3.61178 | opp_overlap 2317808 2317811, overlap 2317812 2317824 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GTGTCTTATCTGGCA TTTGCACTGAATGCC TERM 2831 2317844 - 2317811 - T 80 -12.5 -3.00585 | opp_overlap 2317811 2317812 2317824, overlap 2317808 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GTGTCTTATCTGGCA TTTGCACTGAATGCC TERM 2832 2317812 - 2317843 + T 100 -18.2 -2.76492 | opp_overlap 2317811 2317808, overlap 2317811 2317824 ATTACATTAAAGTAG GCCAGATAAGACGC GTCA GTGTCTTATCTGGC ATTTGCACTGAATGC rcsC 2320736 - 2317887 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 2833 2320354 - 2320333 - G 75 -4.5 -4.8543 | gap 1, overlap 2320337 TAAGCCGCAGAAAAA TTATCGCGCC AGT AGCGC-ATAA ACCACGCCAATGACT TERM 2834 2320434 - 2320453 + g 86 -10.7 -3.96148 | opp_overlap 2320424 2320422 2320434 AAACAGCGGTTCAAA CGCAGGC ACATCC GCCTGCG TTTCTCGTCCACGCG TERM 2835 2320453 - 2320434 - G 82 -11.4 -3.55815 | opp_overlap 2320434, overlap 2320424 2320422 AAACAGCGGTTCAAA CGCAGGCA CATC CGCCTGCG TTTCTCGTCCACGCG TERM 2836 2320962 - 2320907 - R 78 -6 -4.78157 | overlap 2320911 ACGAAAAATAAGAAA TGACCAATCTGCCGACGCTTGTTAAT GGTT ATATCCTGGCGTCGGCAGATCGCCCA GCAGTCTTATCTGAA S2434 2321787 - 2321011 - | hypothetical protein TERM 2837 2321245 - 2321257 + g 82 -7.7 -4.57073 | CGTGACATCCATATC CAGTG CAC CACTG TTTTTCAGCACGGTG TERM 2838 2321689 - 2321660 - G 70 -3.6 -4.60041 | gap 2, overlap 2321661 ATCGATTGTGAAAAA CTGGCATCTTCGCC CTCT GCCG--GATGCCAG CCAGAGAGCGGTGCG S2435 2323441 - 2321792 - | hypothetical protein TERM 2839 2322030 - 2322045 + g 95 -6 -5.40072 | opp_overlap 2322030, overlap 2322031 TCGCCTTGTAATATA CGCCGC CACT GCGGCA TTTTTTTCGCCAGCC TERM 2840 2322031 - 2322044 + g 76 -9.5 -3.83561 | opp_overlap 2322030, overlap 2322030 CGCCTTGTAATATAC GCCGC CACT GCGGC ATTTTTTTCGCCAGC TERM 2841 2322326 - 2322316 - G 70 -6.8 -4.05446 | opp_overlap 2322319, overlap 2322318 2322319 CTGGCGAAGCAGAAA CACG CTG CGTG GCGCTGCTGTCGGGG TERM 2842 2323340 - 2323366 + g 76 -10.8 -3.29829 | overlap 2323341 CAGCTGATACAGTTG ATCGTGCTGCGC ACC GCGCAGCACCAG TTGTAACGGCGTCTC TERM 2843 2323341 - 2323365 + g 84 -14.3 -2.57683 | overlap 2323340 AGCTGATACAGTTGA TCGTGCTGCGC ACC GCGCAGCACCA GTTGTAACGGCGTCT S2436 2323957 - 2323442 - | hypothetical protein TERM 2844 2324548 - 2324569 + r 74 -10.9 -2.79679 | GGCATATTATCCGCC TGCTCGGCA TAAC TGTCGAGCA TATGCTGCCAGTATT S2438 2326342 - 2325716 - | IS911 orfB TERM 2845 2326124 - 2326135 + g 77 -5.8 -4.63218 | opp_overlap 2326120 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S2440 2326884 - 2326582 - | IS911 orfA TERM 2846 2328331 - 2328318 - R 70 -2.3 -4.96848 | overlap 2328319 TCTCGGAGACAAAAA CGCCG CCTT CAGCA TCCTTACCCAGAATG S2442 2329856 - 2329233 - | hypothetical protein TERM 2847 2329450 - 2329464 + g 93 -11.4 -4.2074 | opp_overlap 2329443 AAAAAAATCATATCG CCAGGC AGC GCCTGG TTTATGTCTTGGCCA TERM 2848 2329514 - 2329530 + g 75 -5.7 -4.59773 | GAATCAAATTAATCG CGGTCAC GTA GGGGCCG TTTTTCCCGCTCCCC TERM 2849 2330766 - 2330781 + r 70 -2.4 -5.07567 | overlap 2330771 GCGCTGACCACGATG CGCAGG CGTA CTGGCG TTTTTTCGGCTGTAC TERM 2850 2330812 - 2330827 + r 76 -4.6 -5.03314 | opp_overlap 2330813, overlap 2330813 GCTCTTCCAGGCCAA AGCTGG CTTG CCAGCG TTTTTTACCGCTCAA TERM 2851 2331092 - 2331062 - R 71 -7.6 -3.92542 | overlap 2331065 2331087 2331088 2331090 GGTAGCGGCAAACAA CAATGGCTCCAGCA GTT TGCTTAAACCACTG CGCTGGATCAGCACC TERM 2852 2331287 - 2331277 - R 78 -5.4 -4.73682 | TCTGATAATAGAAAA CGAA ATC TTCG CTCAGAACATCGTGG TERM 2853 2331638 - 2331617 - R 81 -8.7 -4.55023 | opp_overlap 2331617, overlap 2331612 CCTAATACGACAAAA GCCCAGACT TTGC AGCCTGGAC TTTTCAATTCAAACA TERM 2854 2331668 - 2331655 - R 74 -8.1 -4.0098 | opp_overlap 2331655 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA TERM 2855 2331655 - 2331668 + r 76 -8.1 -4.13767 | opp_overlap 2331655 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA gyrA 2334317 - 2331690 - | DNA gyrase subunit A TERM 2856 2333445 - 2333465 + g 82 -2.4 -5.45802 | overlap 2333437 AGACTCGTCACGCAG CGCGCTGA TGCCT TCCACGCG TTTTTCTTTTACCAG ubiG 2334464 - 2335186 + | 3-demethylubiquinone-9 3-methyltransferase TERM 2857 2335219 - 2335233 + F 73 -10 -3.30124 | overlap 2335214 2335230 GCCAATGCCTGATGC GACGCT TGC AGCGTC TTATCAGGCCTACAA TERM 2858 2335230 - 2335274 + F 88 -12.3 -3.53811 | opp_overlap 2335271, overlap 2335219 2335261 ATGCGACGCTTGCAG CGTCTTATCAGGCCTAC AAATGCTCTCC GTAGGCCAGATAAGGCG TTTACGCCGCATCCG TERM 2859 2335354 - 2335341 - f 71 -3.7 -4.87665 | overlap 2335342 2335343 CGTCATCGACAAAAA CCCTG CCGT CTGGG CAAAATCATCACTCC TERM 2860 2338893 - 2338865 - f 80 -6 -5.07567 | gap 1, overlap 2338890 TCATATCCGAAAAAA CCAG-CCATTGCC CATC GGCGATAGACTGG CCCCCTGAATCTCCA S2447 2338932 - 2339342 + | insertion sequence 2 OrfA protein S2448 2339300 - 2340205 + | insertion element IS2 transposase InsD TERM 2861 2342051 - 2342038 - g 77 -6.7 -4.56597 | GCTGGTGTTGAAAAA CAACC GTGG GGTTG AAGGCAACCGCGTGC TERM 2862 2342910 - 2342898 - g 70 -4.8 -4.4959 | opp_overlap 2342908 GTGAATCAATCAAAA CGCA CGGCC TGCG TAACTCCACGCTTTC nrdA 2341076 - 2343361 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2863 2343431 - 2343388 - f 90 -13.3 -3.53811 | opp_overlap 2343380 2343396, overlap 2343428 2343430 CGGATGCGGCGTAAA CGCCTTATCCGGCCTAC GGCTCGGTTT GTAGGCCTGATAAGACG CGCCAGCGTCGCATC TERM 2864 2343482 - 2343499 + F 71 -7.7 -3.88291 | gap 1 AGCGTGAACGCCTTA TCCG-GCC TAC GGCTCGGA TTTGTAGGCCTGATA nrdB 2343595 - 2344725 + | ribonucleotide-diphosphate reductase subunit beta yfaE 2344725 - 2344979 + | 2Fe-2S ferredoxin YfaE inaA 2345683 - 2345033 - | hypothetical protein yfaH 2345898 - 2346104 + | hypothetical protein TERM 2865 2346137 - 2346112 - T 93 -15.5 -2.86743 | overlap 2346114 AAATTTGATATGAGA CAGGATGGCGC ATGA ACGCCATCCTG CAGTAACATTACTCT TERM 2866 2346135 - 2346114 - T 80 -12.3 -2.97925 | overlap 2346112 ATTTGATATGAGACA GGATGGCGC ATGA ACGCCATCC TGCAGTAACATTACT glpQ 2347222 - 2346146 - | glycerophosphodiester phosphodiesterase glpT 2348585 - 2347227 - | sn-glycerol-3-phosphate transporter TERM 2867 2347432 - 2347448 + g 79 -3.5 -5.08824 | AGCCCGGTAAAGCCC GCTGCCG TAC CTGCCGC TTTTTTCGGTGCCAG TERM 2868 2347864 - 2347883 + g 76 -4.2 -4.94972 | gap 1 ATGAAGATTTGCTTC GCGG-TCAG CTC CTGTTCCGC TTTTTCGTTATAGTC TERM 2869 2348321 - 2348306 - G 70 -6 -4.25104 | CTGCGGGCAGGAAAA CGCGCG GATT CGAGCG ATCCGATACCGAACC glpA 2348858 - 2350486 + | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 2870 2350560 - 2350545 - g 72 -4.6 -4.66833 | CTGCAACTGCAAAAA CACGGC CTGC GCTGTG CCATTGTCACGCGTG TERM 2871 2351498 - 2351488 - g 74 -8.2 -3.86897 | TTGATGTGCTACAAA CCGC CAC GCGG GGTGAATGGTATAAG glpB 2350476 - 2351735 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2351732 - 2352922 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 2872 2352935 - 2352962 + F 100 -14.2 -4.65895 | TAAACTCCCTTCTGA TGCCCGGTAAGC ATGT GGTTACCGGGCA TTTTTGCGTACACGA TERM 2873 2353256 - 2353217 - g 71 -9.4 -3.4376 | gap 1 ATACATTTACCAGAA CCACTGCGCAAGCTTTGCA ACC TGCAAACCTTACGCC-TGG AACCCACTAGTTTTA yfaD 2353115 - 2354065 + | hypothetical protein S2460 2354576 - 2354106 - | hypothetical protein S2461 2355833 - 2354631 - | competence damage-inducible protein A TERM 2874 2355337 - 2355319 - G 87 -4.5 -5.27335 | gap 1, overlap 2355320 TGTGGTAAAGAAAAA CGCTCGCG CAGG CGCG-GCA GGATTTCGTGCTCGA S2462 2356462 - 2355920 - | hypothetical protein yfaO 2356804 - 2357166 + | hypothetical protein TERM 2875 2357194 - 2357173 - T 82 -13.1 -2.93073 | opp_overlap 2357163, overlap 2357156 2357170 CTTCTTTAACAATGA TGACAGCCA TCAC TGGCTGTCA GATTGAAAATTTAGT ais 2357783 - 2357205 - | protein induced by aluminum S2465 2358115 - 2359254 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase S2466 2359258 - 2360226 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2876 2360448 - 2360460 + F 88 -7.7 -5.0432 | CGCATTGCCCAACTG TCACC AGA GGTGA TTTTCTCTTTTTATT TERM 2877 2361685 - 2361665 - g 70 -4 -4.59773 | opp_overlap 2361665 GCCTATGGCGAAAAA GAGGGT TTACAGTTC ACCCTC TTCCTCCCGTTTAAC ybfG 2360657 - 2362207 + | hypothetical protein S2468 2362204 - 2363094 + | hypothetical protein TERM 2878 2363316 - 2363277 - g 75 -5.7 -4.59773 | opp_overlap 2363275 2363277 2363278 2363315, overlap 2363278 CGTTATTTCGAAAAA CCCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGGC TATTTGGCGCGAATA TERM 2879 2364126 - 2364104 - g 81 -4.8 -5.14563 | opp_overlap 2364107 GCTGGCAGCAAAAAA TAATCCTCTG GCG CTGCGGATTA ATGGCTGGATTAACA TERM 2880 2364324 - 2364299 - g 72 -6.9 -4.19678 | gap 1 GTACACCTTAACAAA CGTCGAAAAGAC CTG GTCTTT-CGCCG CGCTTTGCCCGCTGG arnT 2363094 - 2364746 + | 4-amino-4-deoxy-L-arabinose transferase S2567 2364743 - 2365078 + | sucrose-6 phosphate hydrolase S2471 2365078 - 2365464 + | hypothetical protein menE 2367190 - 2365835 - | O-succinylbenzoic acid--CoA ligase TERM 2881 2367074 - 2367109 + g 70 -9.7 -3.25015 | gap 1, opp_overlap 2367074 ATAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG TERM 2882 2367109 - 2367074 - G 75 -11.9 -3.05935 | gap 1, opp_overlap 2367074 ATAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG menC 2368149 - 2367187 - | O-succinylbenzoate synthase TERM 2883 2367549 - 2367566 + g 81 -9.1 -4.09511 | opp_overlap 2367548 TTTCACGGGCAAACG CTCGCGA ATCA TCGCGGG TTTTGCACGGCTCTT TERM 2884 2368063 - 2368073 + g 85 -8.2 -4.57837 | opp_overlap 2368060 CAGGCAAACGTACAG CCCG TCG CGGG TTTTTAACCGCCTGT menB 2369006 - 2368149 - | naphthoate synthase TERM 2885 2369051 - 2369028 - R 84 -10.4 -3.91897 | gap 1, opp_overlap 2369041 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATTACGCCAGCGGGA yfbB 2369779 - 2369021 - | acyl-CoA thioester hydrolase YfbB TERM 2886 2369056 - 2369081 + g 74 -9.7 -3.48276 | gap 1, overlap 2369041 CCAGACTTGCGATTA CGC-CAGCGGGA TTT TCCCGATGCGCG TTATGTCCGGCGCGA TERM 2887 2369188 - 2369177 - G 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 2888 2369246 - 2369212 - G 70 -10.8 -2.80796 | gap 1, opp_overlap 2369245, overlap 2369211 2369214 2369232 2369233 GGTTAGCACGTAAAT CAGGCTGGACGGCGA GAGAAG TCGCC-TCCAGCATG GCGGCAAGGGTTGCG TERM 2889 2369495 - 2369473 - G 72 -7.6 -3.95051 | opp_overlap 2369487 CAATAACCCCACAAA GCCCCGCCAG CCC CTGGCAAGCC GCCATCATTGCCACC menD 2371446 - 2369776 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 2890 2370806 - 2370816 + g 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CGC GCTG TTTTTCACTTTCCAG menF 2372830 - 2371535 - | menaquinone-specific isochorismate synthase TERM 2891 2371969 - 2371988 + g 80 -5.6 -4.91109 | AGATATCTTCCACCA CCAGCATG TTCT CGCGCTGG TTTTTATCATCCGCC TERM 2892 2372895 - 2372865 - R 82 -13.4 -2.85847 | opp_overlap 2372853 AAGCCTCACATTATA CGGGGTACTACA AAAAAAA TGCAGTACCCCG GTGTAGGGAGGTTTT elaB 2373214 - 2372909 - | hypothetical protein elaA 2373730 - 2373269 - | hypothetical protein elaC 2373795 - 2374712 + | ribonuclease Z S2482 2375148 - 2375423 + | IS1 orfA S2483 2375342 - 2375845 + | IS1 orfB TERM 2893 2376106 - 2376143 + T 78 -12.1 -2.96695 | opp_overlap 2376108, overlap 2376104 ACATCATTGTTAATC AATTCGACCAGTCAGTA AATA TGCTGACTGGTCGAACA TAATTTGCTAAAAAG TERM 2894 2376141 - 2376108 - T 100 -16.9 -3.35073 | opp_overlap 2376106 2376104 ATCATTGTTAATCAA TTCGACCAGTCAGTA AATA TGCTGACTGGTCGAA CATAATTTGCTAAAA TERM 2895 2376213 - 2376240 + T 100 -15 -3.16785 | gap 1, opp_overlap 2376221, overlap 2376221 AATCTACGGGTATTT CCAGCATATCGCG GCA CGCGAT-TGCTGG TCTGTTGATGTAGTG TERM 2896 2376633 - 2376610 - T 83 -4 -5.38249 | gap 1 AGCAATTAGAAAAAA CAGTTCGT-TA TCT TACACAAACTG TGCATCCACGTAATG TERM 2897 2377574 - 2377594 + T 74 -8.2 -3.97368 | opp_overlap 2377575, overlap 2377575 AGAGCGCCAAAAAAA ACCGCCGA ACATG TCGGCGGC TTTCTGACTTACAAA TERM 2898 2377593 - 2377575 - T 100 -11.7 -5.76949 | opp_overlap 2377574 2377575 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA TERM 2899 2377575 - 2377593 + T 78 -11.7 -2.981 | opp_overlap 2377575, overlap 2377574 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA nuoN 2379075 - 2377618 - | NADH dehydrogenase subunit N TERM 2900 2378257 - 2378245 - G 73 -9.1 -3.67296 | GATGATGGAGGCAAA GGCGA TAA TCGCC AGTACTACGCGAATC nuoM 2380611 - 2379082 - | NADH dehydrogenase subunit M TERM 2901 2380045 - 2380035 - G 74 -2.4 -5.10461 | overlap 2380036 2380038 2380039 TGTAGTGAACAAAAA CCAG CGC CAGG ATGGCGATCAACATC TERM 2902 2380403 - 2380391 - G 75 -6.9 -4.41956 | ATAGAGATACCAAAA CGCGG GAT CCACG GCATGTCGAATTCAG TERM 2903 2380695 - 2380737 + r 71 -7.7 -3.88232 | gap 1, overlap 2380696 TCTCTTCGGACTGGG GGTAGTGTCGGATGCGCCGC GAAG GCAGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 2904 2380696 - 2380736 + r 74 -11.2 -2.92618 | gap 1, overlap 2380695 CTCTTCGGACTGGGG GTAGTGTCGGATGCGCCGC GAAG GCAGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2382616 - 2380775 - | NADH dehydrogenase subunit L TERM 2905 2381271 - 2381289 + g 72 -4.6 -4.68601 | overlap 2381269 CTGTGAGTTACCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT TERM 2906 2382101 - 2382082 - G 78 -7.8 -4.33165 | CGAAAGCGAGGAAAA CGTCACCC ACAC GGGTCACG ACGAACGCTTTCATT nuoK 2382915 - 2382613 - | NADH dehydrogenase subunit K nuoJ 2383466 - 2382912 - | NADH dehydrogenase subunit J nuoI 2384020 - 2383478 - | NADH dehydrogenase subunit I nuoH 2385012 - 2384035 - | NADH dehydrogenase subunit H TERM 2907 2384405 - 2384381 - G 77 -12.1 -2.71712 | overlap 2384380 TCCGGCTGGTCAAAC GGGTGACGGTG ACA CACCGCCACGC CCGCGATGGCAAAGG TERM 2908 2384855 - 2384835 - G 90 -14.7 -2.71364 | TCATGTCCGCAACCA GCTGGAGCG AAC CGCCCCAGC CAACACGGTTAGGTC nuoG 2387735 - 2385009 - | NADH dehydrogenase subunit G TERM 2909 2386972 - 2386983 + g 70 -5.8 -4.18018 | TAGTGGTTTACCGTA CCGT TGTA ACGG TTTTCGATACGACGC TERM 2910 2387627 - 2387608 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2389125 - 2387788 - | NADH dehydrogenase I subunit F TERM 2911 2388247 - 2388261 + g 88 -11.4 -3.84451 | GTCAGTCCCCGCGCC GCCTGG CTG CCAGGC TTTAAATTTCAGACC TERM 2912 2389048 - 2389062 + g 81 -10 -3.96148 | overlap 2389047 GCTGCGGTATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2389622 - 2389122 - | NADH dehydrogenase subunit E nuoC 2391427 - 2389625 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 2913 2391147 - 2391136 - G 72 -5.8 -4.41548 | opp_overlap 2391145, overlap 2391144 2391145 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 2914 2391168 - 2391144 - G 74 -3.3 -4.89729 | opp_overlap 2391145, overlap 2391136 2391145 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT nuoB 2392183 - 2391521 - | NADH dehydrogenase subunit B nuoA 2392642 - 2392199 - | NADH dehydrogenase subunit A TERM 2915 2392344 - 2392330 - G 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC TERM 2916 2393195 - 2393230 + r 100 -8.9 -5.09173 | opp_overlap 2393198, overlap 2393196 2393198 GATTTTTACTAAAAA AAAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTCG TTTTTTACACTATTG TERM 2917 2393196 - 2393229 + r 88 -12.4 -3.6442 | opp_overlap 2393198, overlap 2393195 2393198 ATTTTTACTAAAAAA AAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTC GTTTTTTACACTATT TERM 2918 2393198 - 2393227 + r 100 -15 -3.38726 | opp_overlap 2393198, overlap 2393196 2393195 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTTACACTA TERM 2919 2393227 - 2393198 - R 100 -15 -5.86061 | opp_overlap 2393198 2393196 2393195 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTTACACTA lrhA 2394211 - 2393273 - | LysR family NADH dehydrogenase transcriptional regulator TERM 2920 2393494 - 2393520 + g 77 -12.2 -2.78679 | overlap 2393493 GGCTCATCATCTCAA CCGGCCTTGCCG TCA CGCCAAGACCGG CTTTCACTGCCGCAC TERM 2921 2393961 - 2393935 - G 72 -11.1 -3.12482 | opp_overlap 2393942, overlap 2393939 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGGATTTTCC TERM 2922 2393981 - 2393964 - G 72 -6.3 -4.30576 | gap 1, overlap 2393966 GCCTCATCATTAAAA CG-CAGGA TTT TCCTGGCG TAACCAAGAAGTTGA TERM 2923 2395135 - 2395119 - H 76 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC TERM 2924 2395369 - 2395347 - g 70 -10.6 -2.75963 | overlap 2395346 ATTGCGATTCCAAAG GGCTTTACTC CGC GCGTAAAGCC ATCATGCAGCACTAC S2501 2395130 - 2396347 + | aminotransferase AlaT TERM 2925 2396357 - 2396383 + F 86 -13.8 -3.28791 | CTGTAATCTTAATTT CACTGCCGGA GATTGCA TCCGGCAGTG TTATCCCGCCACAAT TERM 2926 2396939 - 2396912 - g 70 -4.8 -4.56597 | gap 1, overlap 2396914 2396927 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG TCGCAGCCAGGAGAT TERM 2927 2396959 - 2396973 + G 72 -7.2 -4.1673 | AGCCAGGAGATGGAC TACTTC ATG GAAGTA TTTGTTCCCAGCTTC S2502 2396431 - 2397030 + | hypothetical protein yfbS 2398921 - 2397089 - | putative transport protein TERM 2928 2398988 - 2398971 - R 100 -9.8 -5.24129 | TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG yfbT 2399658 - 2399008 - | putative phosphatase TERM 2929 2399288 - 2399301 + g 76 -9.5 -3.79419 | overlap 2399287 ACAAACACCTCTGGT GCGGG AAGC CCCGC TATTTTATGGCGCGC S2505 2400163 - 2399669 - | hypothetical protein TERM 2930 2400202 - 2400220 + r 74 -6 -4.55689 | opp_overlap 2400202 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 2931 2400220 - 2400202 - R 89 -6 -5.76949 | opp_overlap 2400202 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT S2506 2400701 - 2400246 - | hypothetical protein ackA 2401039 - 2402241 + | acetate kinase TERM 2932 2402245 - 2402272 + F 100 -16.4 -4.36914 | gap 1, overlap 2402247 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 2933 2402247 - 2402269 + F 100 -19.2 -2.8733 | overlap 2402245 GACTGCCTGATTTCA CACCGCCAGC TCA GCTGGCGGTG CTGTTTTGTAACCCG TERM 2934 2403287 - 2403302 + G 78 -9 -3.96148 | overlap 2403291 CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2402316 - 2404460 + | phosphate acetyltransferase TERM 2935 2404501 - 2404523 + F 100 -10.7 -5.64304 | CTGCGGATATCTGAA CCGGAAATA ATCAC TATTTCCGG TTTTTTATTCTCTTA TERM 2936 2405473 - 2405492 + G 74 -8.6 -3.87149 | overlap 2405445 TTCGTGAAAAGCAGG CGGATGTT GAAC AACGTCCG TTTACCTTTGGTGAC yfcC 2404650 - 2406170 + | hypothetical protein TERM 2937 2406180 - 2406197 + T 100 -12.7 -5.32944 | opp_overlap 2406175 2406182 CACTAAAAATGTTAA GAGCCGC AATT GCGGCTC TTTTTTCATTCTGCC TERM 2938 2406195 - 2406182 - T 71 -9.5 -3.17553 | opp_overlap 2406180, overlap 2406175 CTAAAAATGTTAAGA GCCGC AATT GCGGC TCTTTTTTCATTCTG S2510 2406745 - 2406203 - | putative regulator TERM 2939 2406291 - 2406309 + g 82 -9.6 -4.16016 | opp_overlap 2406290 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA yfcE 2407354 - 2406803 - | phosphodiesterase yfcF 2408054 - 2407410 - | hypothetical protein TERM 2940 2407746 - 2407761 + g 86 -9 -4.42386 | CCAGGCCTGAATCTG TCGTGC ACGC GCACGA TTTTCTAAATCAAGC TERM 2941 2408457 - 2408437 - g 70 -5.4 -4.37092 | overlap 2408440 ATCTGGCTGAGAAAA CAGGACTC TTTTT GAGTCATG AAACGCGTGAGCGCG yfcG 2408190 - 2408837 + | putative S-transferase folX 2408894 - 2409256 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 2942 2409542 - 2409520 - g 71 -2.6 -4.93968 | overlap 2409522 ACTCACAAGCAAAAA GAGCGTCTCT GCC AAAGCCGCTG GAATATCACGCAAAA TERM 2943 2409734 - 2409694 - g 93 -12.6 -3.93583 | gap 1, overlap 2409679 GAATTTACTCATAAA CTCTGCGCCC-GCTGGGAA GAGA TTGCCTGCCGGGCGCAAAG TGACAAAACGCGAGT S2515 2409277 - 2410170 + | putative sugar nucleotide epimerase yfcI 2411108 - 2410218 - | hypothetical protein TERM 2944 2411084 - 2411072 - G 71 -9.1 -3.51168 | overlap 2411070 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 2945 2411299 - 2411273 - R 71 -7.3 -4.08064 | gap 1, overlap 2411275 AATTCCCCTTGAAAA TACTCCGGCAGC GTTA GCCACCGGAG-A GGAAATTATTTCAGC TERM 2946 2411298 - 2411275 - R 88 -12.4 -3.63744 | overlap 2411273 TTCCCCTTGAAAATA CTCCGGCAGC GTTA GCCACCGGAG AGGAAATTATTTCAG hisP 2412078 - 2411305 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2412802 - 2412086 - | histidine transport, membrane protein M hisQ 2413485 - 2412799 - | histidine transport system permease protein TERM 2947 2413521 - 2413555 + r 70 -4.9 -4.42062 | gap 1, overlap 2413522 TGGTGAATTACCGCC TCTTGTCTCCCTCCGG TTAC CCGAAGGGAG-CGGGC TTTCTTTCACCGATG hisJ 2414357 - 2413575 - | histidine-binding periplasmic protein of high-affinity histidine transport system TERM 2948 2414217 - 2414229 + g 84 -4.1 -5.27477 | opp_overlap 2414209 ATCGAAACCAACCAG TTCGC CTT GTGAA TTTTTTGATTCAAAT argT 2415360 - 2414578 - | lysine-, arginine-, ornithine-binding periplasmic protein TERM 2949 2414704 - 2414727 + g 100 -5.2 -5.63645 | ATCTTTACGTAGCCC TACACCGGTG CCAT CACCGAAGTA TTTTTTGTCTTTTAC TERM 2950 2415617 - 2415599 - R 95 -13.2 -4.07687 | overlap 2415610 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG ubiX 2416195 - 2415626 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2951 2416277 - 2416259 - R 78 -12.4 -2.53263 | GGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TCAGCGAAGGCATCA purF 2417807 - 2416290 - | amidophosphoribosyltransferase TERM 2952 2416709 - 2416722 + g 73 -3.7 -4.82901 | GGACGATGGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 2953 2417578 - 2417544 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TAGGGTAACGCACAT cvpA 2418332 - 2417844 - | colicin V production protein TERM 2954 2418460 - 2418435 - R 100 -9.8 -5.1356 | GCGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC dedD 2419253 - 2418591 - | hypothetical protein folC 2420511 - 2419243 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 2955 2419910 - 2419923 + g 70 -3.7 -4.65895 | opp_overlap 2419895 GGCATTTCCGGCTCA CCGAC AATT GCCGG TTTTTCGCTGCGGAA TERM 2956 2420487 - 2420463 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 2957 2420548 - 2420570 + r 93 -14.8 -3.45054 | opp_overlap 2420548 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 2958 2420570 - 2420548 - R 100 -17 -4.46656 | opp_overlap 2420548 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2421495 - 2420581 - | acetyl-CoA carboxylase subunit beta TERM 2959 2421517 - 2421531 + r 71 -3.5 -4.78848 | CCTTTCTGTCTGAAC CTGGT TCGAT GCCAG TTTTATCTTTGGGGA TERM 2960 2421639 - 2421627 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC GGAGTTACTTTTTAT dedA 2422310 - 2421651 - | hypothetical protein TERM 2961 2422327 - 2422383 + r 80 -9.5 -3.90241 | overlap 2422338 2422378 TTTGCCTATGCCTTG TACTCGTCATCTTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAATGTTCCGAGCA TTATTCTCGTTAGTC TERM 2962 2422338 - 2422372 + r 93 -15.2 -3.03338 | overlap 2422327 CTTGTACTCGTCATC TTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCATTAT truA 2423205 - 2422393 - | tRNA pseudouridine synthase A TERM 2963 2422957 - 2422982 + g 72 -8.1 -3.92542 | ATTTACGCCCAAGGT CCACGCCGCGT CTTT GCGCTGCGCGG TTGTTTCGAAATGCA usg 2424218 - 2423205 - | putative semialdehyde dehydrogenase TERM 2964 2424271 - 2424244 - R 73 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATGTTA CAGCAGAGAGC ATGAAGAAGAGATTA pdxB 2425420 - 2424284 - | erythronate-4-phosphate dehydrogenase TERM 2965 2424950 - 2424913 - G 82 -12 -3.48063 | overlap 2424915 TATGGAAAGTCAGAA TATCCGCGCGCTGGAC TAACTC ATCCAGCGAGCGGAAA TCACCCTCATCCCCA TERM 2966 2424948 - 2424915 - G 100 -14.6 -3.30797 | overlap 2424913 TGGAAAGTCAGAATA TCCGCGCGCTGGAC TAACTC ATCCAGCGAGCGGA AATCACCCTCATCCC div 2425519 - 2426514 + | flagella biosynthesis regulator S2533 2427689 - 2426511 - | hypothetical protein TERM 2967 2427636 - 2427620 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGAGA TGCGG AAGAGCGAAAAACTG TERM 2968 2427850 - 2427881 + r 81 -12.4 -3.14132 | opp_overlap 2427857, overlap 2427857 CGATTGTCAATGATG TGAAAAAGGGAACC ATCA GGTTCCCTTTTGCG TTAGTGCCGGAGGCC TERM 2969 2427874 - 2427857 - R 95 -11.3 -4.64598 | opp_overlap 2427850 2427857 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC TERM 2970 2427857 - 2427874 + r 91 -11.3 -4.30014 | opp_overlap 2427857, overlap 2427850 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC fabB 2429185 - 2427944 - | 3-oxoacyl-(acyl carrier protein) synthase I mnmC 2429344 - 2431350 + | 5-methylaminomethyl-2-thiouridine methyltransferase S2536 2431749 - 2431471 - | hypothetical protein S2537 2432331 - 2431783 - | putative transporting ATPase yfcA 2433140 - 2432331 - | hypothetical protein TERM 2971 2432698 - 2432683 - G 75 -4.6 -4.84017 | AATCCGTCATAAAAA CCGACG CAGC CACCGG CAATTAACGCGAAGG mepA 2433964 - 2433140 - | penicillin-insensitive murein endopeptidase TERM 2972 2433870 - 2433885 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 2973 2433941 - 2433954 + g 76 -3.7 -4.95211 | GGCAAGCAGAGCCAG CAGCG CAAT CGCGG TTTTGTTCATTTTTT aroC 2435053 - 2433968 - | chorismate synthase TERM 2974 2434610 - 2434624 + g 77 -2.8 -5.03314 | opp_overlap 2434610, overlap 2434612 GATTTCAATACCAAA TTTCTC GGC GAGATA TTTTTTGGCAATCGC yfcB 2436353 - 2435088 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase S2541 2436186 - 2436737 + | hypothetical protein TERM 2975 2437310 - 2437300 - TR 78 -5.4 -4.75472 | TGTATAGGAATAAAA GGAT GCG ATCC AAGGGCAACCATAAT TERM 2976 2439408 - 2439398 - TR 74 -8.2 -3.87075 | opp_overlap 2439394 ACTATTGGCGAGAAA CCGG CTG CCGG ATTGCCATTTTTCTG TERM 2977 2440854 - 2440879 + Tr 77 -11.3 -3.28712 | opp_overlap 2440859, overlap 2440856 TCCGTCCCACTGCCA TAGTACCGTTA TAGC TAACGGTACTG TTGTCGCCCCACGGC TERM 2978 2440856 - 2440877 + Tr 79 -11.7 -3.21276 | opp_overlap 2440859, overlap 2440854 CGTCCCACTGCCATA GTACCGTTA TAGC TAACGGTAC TGTTGTCGCCCCACG TERM 2979 2441101 - 2441073 - TR 71 -7.3 -4.05747 | opp_overlap 2441073 2441079, overlap 2441082 TATAGTTGAGATAAA CCGAAACACCCGC ATC GCGGAAGTTCTGG TTATAAGTGGCGGTG TERM 2980 2441873 - 2441883 + Tr 74 -6.8 -4.32034 | TAATCCTCGCCCAGC GCCA GTT TGGC TTTTAATGATGGTAA TERM 2981 2442413 - 2442425 + Tr 72 -4.7 -4.56702 | AAATATCGTACTCTT CCGCC AAT GGCTG TTTATTTAGTTGAAC TERM 2982 2442717 - 2442690 - TR 93 -12 -3.80569 | opp_overlap 2442690, overlap 2442691 CAAAATACATTTAAA TCCCCCATAGCA GTGT CGCTATGGGGGT ATGCCTTACAGGTAA TERM 2983 2442716 - 2442691 - TR 93 -15.5 -2.87257 | opp_overlap 2442690, overlap 2442690 AAAATACATTTAAAT CCCCCATAGCA GTGT CGCTATGGGGG TATGCCTTACAGGTA S2550 2443286 - 2442723 - | putative fimbrial-like protein TERM 2984 2443071 - 2443086 + g 70 -4.6 -4.51654 | AATCTGGAAACTTTT CGGCGT GGTG GTGCCG TTATTTTTCAGTTTT TERM 2985 2443211 - 2443267 + g 77 -8.8 -4.09739 | overlap 2443199 TACCGTTGTTACCCG CAGCGATTGTTGCCGTAGAGGTGA ACACGCCCA TCACCATTGCCGCAGCAATAGCTG TTTTAACAAACTTAC S2551 2444058 - 2443555 - | IS1 orfB S2552 2444252 - 2443977 - | IS1 orfA TERM 2986 2444703 - 2444735 + r 93 -13.7 -3.53811 | opp_overlap 2444703 CTGCCTAATGAGCAA TTATGCCCAATGA ATCTACC TCATTGGGCATAA TTTGGAACACATCAG TERM 2987 2444735 - 2444703 - R 90 -14.4 -3.27298 | opp_overlap 2444703 CTGCCTAATGAGCAA TTATGCCCAATGAA TCTAC CTCATTGGGCATAA TTTGGAACACATCAG S2553 2445232 - 2444747 - | phosphohistidine phosphatase fadJ 2447579 - 2445435 - | multifunctional fatty acid oxidation complex subunit alpha TERM 2988 2445782 - 2445794 + g 100 -4.8 -5.46698 | overlap 2445743 TGAGCGGGTAAATGG CAGG ATCGA CCTG TTTTTTGCTTTTACG TERM 2989 2446128 - 2446140 + g 70 -6.9 -4.13963 | opp_overlap 2446127 2446128, overlap 2446117 GTCACGCACGACAAT GGGCG TTT TGCCC TGTTTTTTCGCCAGT fadI 2448889 - 2447579 - | 3-ketoacyl-CoA thiolase TERM 2990 2449051 - 2449025 - R 100 -20.2 -5.3689 | AGAAAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG TACGTACCCGAGAGG S2556 2449377 - 2449069 - | hypothetical protein fadL 2449725 - 2451065 + | long-chain fatty acid outer membrane transporter TERM 2991 2451107 - 2451087 - f 100 -15.5 -3.85698 | opp_overlap 2451087 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCCCACT TERM 2992 2451087 - 2451107 + F 100 -15.5 -3.64822 | opp_overlap 2451087 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCCCACT S2558 2451431 - 2452489 + | hypothetical protein TERM 2993 2452665 - 2452626 - T 77 -10.3 -3.3785 | opp_overlap 2452636, overlap 2452636 GTAATTGAGGGATAA CAACAAAAAAGGTGAGT TTTGCG ACTCACCTTTTTTATTT GTTTCTTATTCAGAA TERM 2994 2452636 - 2452655 + T 100 -8.6 -5.85425 | opp_overlap 2452626 2452636 GATAACAACAAAAAA GGTGAGTT TTGC GACTCACC TTTTTTATTTGTTTC TERM 2995 2452655 - 2452636 - T 100 -7.9 -5.68489 | opp_overlap 2452636, overlap 2452626 GATAACAACAAAAAA GGTGAGT TTTGCG ACTCACC TTTTTTATTTGTTTC vacJ 2453426 - 2452671 - | lipoprotein precursor yfdC 2453831 - 2454652 + | putative transport protein TERM 2996 2454948 - 2454926 - T 93 -10 -4.60487 | CATGACGGGTAAAAA GTGGATAAAA TAA TTTTACCCAC CGGATTTTTACCCAT TERM 2997 2455839 - 2455850 + T 74 -5.8 -4.63218 | opp_overlap 2455835 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG S2565 2456599 - 2456297 - | IS911 orfA S2566 2457185 - 2456580 - | IS4 orf TERM 2998 2457193 - 2457218 + H 72 -9.1 -3.61398 | opp_overlap 2457193 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 2999 2457218 - 2457193 - H 100 -9.8 -5.61596 | opp_overlap 2457193 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3000 2457406 - 2457421 + H 71 -7.6 -3.87815 | GTTAACGTTAACATT TGCGAT ATTC ATCGCA TTTATGAAAGTAAGG S2470 2457501 - 2458934 + | hypothetical protein S2568 2460000 - 2458942 - | sucrose specific repressor TERM 3001 2460792 - 2460758 - g 70 -5.6 -4.36914 | opp_overlap 2460759 TCCGGCTCTATAAAA GCACGCGGCGGGATTT ATG AAGTCCTGGCACATGC AGAAAAACTGGCTCT dsdA 2460404 - 2461732 + | D-serine dehydratase emrY 2463378 - 2461840 - | multidrug resistance protein Y TERM 3002 2462949 - 2462960 + g 82 -2.2 -5.31877 | TTGACCATAATGCCA GAGC AAAT GTTC TTTTTTCTGGTGGAT emrK 2464541 - 2463378 - | multidrug resistance protein K TERM 3003 2464033 - 2464049 + g 81 -10.1 -3.89131 | TTATAAGCCTGGATA GCGGCAT TCA GTGCCGC TTTGCTACTTATTAA TERM 3004 2464163 - 2464190 + g 83 -10 -4.1337 | gap 1, opp_overlap 2464163, overlap 2464166 ATTGTTGATACTGAA TAC-GTGCTGAAG CGA CTTCGGCACTGTA TTGTTTATCCTGTAA TERM 3005 2464166 - 2464186 + g 80 -11.9 -3.39301 | opp_overlap 2464163, overlap 2464163 GTTGATACTGAATAC GTGCTGAAG CGA CTTCGGCAC TGTATTGTTTATCCT evgA 2464957 - 2465571 + | DNA-binding transcriptional activator EvgA TERM 3006 2465875 - 2465850 - g 75 -5.5 -4.60924 | overlap 2465839 TAAATCTTTTAAAAA GAGCGTTAAAT ATCA AATTAACACTC CGGGAATACGCAGAT TERM 3007 2466813 - 2466794 - g 100 -4.3 -5.66989 | opp_overlap 2466794 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC ATATTATTATGAGCT TERM 3008 2467725 - 2467713 - g 71 -3.3 -4.7373 | CTACCGTAGCAAAAA GTCAG TTT CTGGC AACGATGAGTCACGA evgS 2465576 - 2469169 + | hybrid sensory histidine kinase in two-component regulatory system with EvgA TERM 3009 2469176 - 2469202 + T 82 -11.6 -3.34517 | opp_overlap 2469171, overlap 2469171 2469174 AATGACTAAATTGCG GCTCCCACAATG TTC TAATGTGGGAGC TATTTACCAGCACAT yfdE 2470409 - 2469225 - | hypothetical protein TERM 3010 2469298 - 2469313 + g 75 -4.6 -4.87786 | opp_overlap 2469292, overlap 2469269 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 3011 2470415 - 2470391 - G 83 -6.5 -5.0133 | gap 1, opp_overlap 2470391 2470390 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA S2577 2473151 - 2471457 - | putative oxalyl-CoA decarboxylase TERM 3012 2472048 - 2472065 + g 73 -3.5 -4.79667 | AAAGTAATTTAATGG TTGAGTA TCTG TACTTAA TTTTTCATGCATTTT TERM 3013 2472480 - 2472453 - G 76 -7.9 -4.1711 | gap 1, opp_overlap 2472461 AGCACTTTCAATAAA TTCACGAAGCTG TTCAT CAGCTT-GTGAA TACGCCGCGCCTTTG TERM 3014 2472973 - 2472958 - G 77 -6.1 -4.63218 | overlap 2472959 2472960 TTTTGGGTAAGAAAA CCGCT TGCCGC AGCGG CATAGCCTGCCGACT S2578 2474455 - 2473205 - | formyl-coenzyme A transferase TERM 3015 2474297 - 2474349 + g 70 -6.2 -4.26903 | opp_overlap 2474302 2474304, overlap 2474298 2474302 AAGCGCATCGATATC AGGAATATCTCGCAGTTGGTGACG CGTTA CGTCACCAACGCCGGGACGTTCAA TTTTAATAACGTCAG TERM 3016 2474298 - 2474348 + g 70 -9.7 -3.1582 | opp_overlap 2474302 2474304, overlap 2474297 2474302 AGCGCATCGATATCA GGAATATCTCGCAGTTGGTGACG CGTTA CGTCACCAACGCCGGGACGTTCA ATTTTAATAACGTCA TERM 3017 2474342 - 2474304 - G 81 -12.4 -3.18849 | opp_overlap 2474302 2474298 2474297, overlap 2474302 TCGATATCAGGAATA TCTCGCAGTTGGTGACGC GTT ACGTCACCAACGCCGGGA CGTTCAATTTTAATA TERM 3018 2474913 - 2474877 - R 95 -11.9 -3.92542 | opp_overlap 2474876 2474875 GCGAGCGCCAAATAA TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA AATTGTCGGCTGGAG S2579 2475591 - 2474968 - | hypothetical protein TERM 3019 2476019 - 2476009 - g 83 -5.4 -5.15381 | AAGAGACTGAAAAAA CATC AGC GATG ACGACCACACACTCT S2580 2475888 - 2476163 + | hypothetical protein S2581 2476482 - 2476240 - | hypothetical protein ddg 2476835 - 2477755 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 3020 2478223 - 2478204 - T 100 -13.6 -4.8622 | opp_overlap 2478204 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG TERM 3021 2478204 - 2478223 + T 100 -13.6 -3.89215 | opp_overlap 2478204 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG S2583 2479484 - 2478246 - | aminotransferase TERM 3022 2479529 - 2479546 + H 71 -6.9 -4.11394 | overlap 2479531 2479542 ACCGTCCGAGCGACG CTGCCAC AATG GTGGCTG TTTTGAAAATAGCCT TERM 3023 2480518 - 2480497 - H 78 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC S2585 2481362 - 2482096 + | putative 2-component transcriptional regulator TERM 3024 2482597 - 2482647 + G 72 -4.7 -4.60797 | gap 1, opp_overlap 2482637, overlap 2482599 AAGTTTGCTGCATCT TTGCCGCAACGTGGTGAATATGCC GCCG GGTA-ATTCACAACCGCGCGGCGA TTTTCTCTATCACAG S2586 2482109 - 2482681 + | putative ARAC-type regulatory protein S2588 2485464 - 2482969 - | putative PTS system enzyme IIA component, enzyme I TERM 3025 2483822 - 2483798 - G 78 -8.5 -4.23213 | opp_overlap 2483798 CCGATACTGAAGAAA TCGACCTCATC GCA GAAGTGGTCGA TGATGTAGCACACCG TERM 3026 2484350 - 2484384 + g 75 -5.1 -4.72486 | gap 2, opp_overlap 2484355, overlap 2484353 2484355 2484363 CGCTTGTTATCACGG GAATAGGC-CA-GCTGC GCG GCAGCCTGCGCCTGTTG TTTTTGGCGTTTATC TERM 3027 2484353 - 2484381 + g 77 -6.8 -4.45259 | gap 2, opp_overlap 2484355, overlap 2484350 2484355 2484363 TTGTTATCACGGGAA TAGGC-CA-GCTGC GCG GCAGCCTGCGCCTG TTGTTTTTGGCGTTT S2589 2486526 - 2485489 - | exoaminopeptidase TERM 3028 2485602 - 2485572 - G 77 -8.4 -4.11216 | gap 2 GCTCCATCTGCAAAA TGTCGCGGCAATCG GCAAT CGAT-GCCGCG-CA ATGTCCGTGGCGGGT TERM 3029 2486828 - 2486786 - R 81 -13.2 -2.71144 | CAGCCTCGGTAATGA CCCGGCGCGCGGCGTCGTCA ATC TGCTGGCAGCGCACGCCGGG GCGAATTGCAGAGAT TERM 3030 2487008 - 2487059 + r 71 -10.8 -2.62184 | gap 1, overlap 2486992 CCCGCTGCAACAATC TTGTCGCTGGC-TTTGCCGTGCGGC AGC GCCCCGCGCCAGCCGCTGGCGACAA TGGTGTCAAAAGAGG S2591 2488871 - 2487624 - | putative transport protein TERM 3031 2488299 - 2488325 + g 76 -12.4 -2.54732 | opp_overlap 2488301 2488306, overlap 2488298 2488301 2488306 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCATTTCAC TERM 3032 2488306 - 2488318 + g 72 -5.5 -4.56607 | opp_overlap 2488306 2488301, overlap 2488301 2488299 2488298 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC S2592 2489219 - 2488893 - | putative PTS system enzyme IIB component TERM 3033 2489425 - 2489400 - R 72 -8.3 -3.70674 | overlap 2489398 2489401 2489403 GTATGATTTAAAAGA TTATCGGGAGA GTTA CCTCCCGATAT AACAGGAAGGATTTA TERM 3034 2489424 - 2489401 - R 77 -11.8 -2.81922 | overlap 2489400 2489398 2489403 TATGATTTAAAAGAT TATCGGGAGA GTTA CCTCCCGATA TAACAGGAAGGATTT TERM 3035 2489422 - 2489403 - R 70 -10 -2.95081 | overlap 2489401 2489400 2489398 TGATTTAAAAGATTA TCGGGAGA GTTA CCTCCCGA TATAACAGGAAGGAT glk 2490403 - 2489438 - | glucokinase S2594 2490607 - 2491863 + | hypothetical protein S2595 2491978 - 2492304 + | hypothetical protein TERM 3036 2492361 - 2492328 - T 73 -9.5 -3.44319 | opp_overlap 2492338, overlap 2492329 TCCAATGGAGCACAA TGCCTGATGCGACGC TAGC GCGTCTTATCAGGCC TACAAACCGGCTCTT TERM 3037 2492360 - 2492329 - T 81 -13 -2.6627 | opp_overlap 2492338, overlap 2492328 CCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCGGCTCT mntH 2493683 - 2492445 - | manganese transport protein MntH TERM 3038 2493714 - 2493699 - H 73 -7.6 -4.07568 | opp_overlap 2493694 2493699 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTATGCTA TERM 3039 2494612 - 2494633 + G 70 -7.3 -4.00782 | CGTCGTTGCTGCGCT GGTACTGAA CATG TTCAGCACC TTTATCGTGCTGTCG nupC 2494019 - 2495221 + | permease of transport system for 3 nucleosides TERM 3040 2495271 - 2495224 - f 100 -17.2 -4.07687 | opp_overlap 2495225 2495238, overlap 2495225 2495227 2495238 ACTGGTGCTGTAAAA CCATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC TERM 3041 2495270 - 2495225 - f 100 -20.7 -3.04398 | opp_overlap 2495225 2495238, overlap 2495224 2495227 2495238 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3042 2495225 - 2495270 + F 100 -16.3 -3.17212 | opp_overlap 2495224 2495225 2495227 2495238, overlap 2495238 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3043 2495268 - 2495227 - f 100 -17.5 -3.08032 | opp_overlap 2495225 2495238, overlap 2495225 2495224 2495238 GGTGCTGTAAAACCA TACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCC TGTTAATCAGCTAAT TERM 3044 2495238 - 2495257 + F 100 -15 -5.04987 | opp_overlap 2495227 2495225 2495224 2495238, overlap 2495225 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3045 2495257 - 2495238 - f 100 -15 -5.43414 | opp_overlap 2495238 2495225, overlap 2495227 2495225 2495224 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3046 2496741 - 2496725 - f 80 -6.5 -4.74215 | AGATGATGAAGAAAA CGGGTAC CAG GTAACCG GCAATAAAGTCGTTT TERM 3047 2497581 - 2497562 - f 100 -11.4 -5.43414 | AGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTGGAAATTTGGTGG TERM 3048 2498122 - 2498110 - g 82 -9.1 -4.28762 | overlap 2498100 ACAACGTCACCAAAA CCTGG CGT CCAGG GTGGCAAAGCCCGAC yfeC 2498017 - 2498361 + | hypothetical protein TERM 3049 2498488 - 2498474 - g 71 -2.8 -4.87318 | overlap 2498466 TGGAAAACGGAAAAA TTTCCC GGC GTGAAA GGCGGTCGTGCCAGA yfeD 2498384 - 2498755 + | hypothetical protein TERM 3050 2498758 - 2498792 + T 84 -8.6 -4.58663 | opp_overlap 2498764, overlap 2498764 CGAATCAGCATAAAT AAAAAACGGCAGGATA TTA TCTCCTGCCGTTTATC TTTTTACACGCTAAT TERM 3051 2498764 - 2498786 + T 100 -12 -4.55887 | opp_overlap 2498764, overlap 2498758 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC TERM 3052 2498786 - 2498764 - T 100 -12 -5.73978 | opp_overlap 2498764 2498758 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC gltX 2500222 - 2498807 - | glutamyl-tRNA synthetase TERM 3053 2500790 - 2500758 - H 71 -9.9 -3.19463 | opp_overlap 2500759 2500767, overlap 2500759 2500767 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATACTCAA TERM 3054 2500789 - 2500759 - H 80 -13.4 -2.51464 | opp_overlap 2500759 2500767, overlap 2500758 2500767 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATACTCA TERM 3055 2500759 - 2500789 + H 87 -14.9 -2.90212 | opp_overlap 2500759 2500758 2500767, overlap 2500767 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATACTCA TERM 3056 2500781 - 2500767 - H 100 -9.2 -5.17576 | opp_overlap 2500767 2500759, overlap 2500759 2500758 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3057 2500767 - 2500781 + H 100 -8.5 -5.24989 | opp_overlap 2500759 2500758 2500767, overlap 2500759 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3058 2500874 - 2500850 - H 74 -8.6 -3.96483 | gap 2 AGCGCAGCGAAACAA CGGAGCCGCTCG CGG CGA-CGGC-CCG AAGGGCGAGCGAAGC TERM 3059 2500946 - 2500914 - H 100 -15.7 -3.19463 | opp_overlap 2500915 2500923, overlap 2500915 2500923 TGCACGACCCACCAA TGCAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATTTGTAA TERM 3060 2500945 - 2500915 - H 100 -19.2 -2.51464 | opp_overlap 2500915 2500923, overlap 2500914 2500923 GCACGACCCACCAAT GCAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3061 2500915 - 2500945 + H 100 -18.5 -2.94194 | opp_overlap 2500915 2500914 2500923, overlap 2500923 GCACGACCCACCAAT GCAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3062 2500923 - 2500937 + H 100 -8.5 -5.24989 | opp_overlap 2500915 2500914 2500923, overlap 2500915 CACCAATGCAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3063 2500937 - 2500923 - H 100 -9.2 -5.17576 | opp_overlap 2500923 2500915, overlap 2500915 2500914 CACCAATGCAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC flxA 2501032 - 2501373 + | hypothetical protein TERM 3064 2501359 - 2501348 - T 70 -2.2 -5.00884 | ATCCTGTTGAAAAAA CGAC TCAT ATCG ATATCTATATCTGAT yfeR 2502290 - 2501364 - | putative LYSR-type transcriptional regulator TERM 3065 2502598 - 2502613 + G 73 -9 -3.69621 | TTTGTGGGTAATGTG CAGCAC CTTC GTGCTG TTTCCGATTCTGGGT yfeH 2502380 - 2503378 + | putative cytochrome oxidase ligA 2505610 - 2503595 - | NAD-dependent DNA ligase LigA TERM 3066 2505649 - 2505633 - R 93 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAGGAGTTA zipA 2506664 - 2505681 - | cell division protein ZipA TERM 3067 2506768 - 2506802 + H 72 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3068 2506921 - 2506931 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3069 2507200 - 2507210 + G 72 -6.8 -4.20516 | AACTGGATTGCCGCT CCGT TTA ACGG TTTATTGGCTGAACA cysZ 2506897 - 2507658 + | putative sulfate transport protein CysZ TERM 3070 2507698 - 2507717 + F 93 -12.8 -3.7347 | opp_overlap 2507698 2507696 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3071 2507717 - 2507698 - f 77 -10.6 -3.34398 | opp_overlap 2507698, overlap 2507696 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3072 2508323 - 2508309 - g 82 -3.4 -5.19261 | overlap 2508310 AAATTCACGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2507843 - 2508814 + | cysteine synthase A TERM 3073 2508858 - 2508843 - f 100 -9 -5.08011 | opp_overlap 2508843, overlap 2508834 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC TERM 3074 2508843 - 2508858 + F 100 -9 -5.26316 | opp_overlap 2508834 2508843 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC ptsH 2509198 - 2509455 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3075 2509817 - 2509788 - g 72 -6.5 -4.36903 | gap 1, opp_overlap 2509788 2509788, overlap 2509790 CTGATTAAAGATAAA CACATGA-CAGCTG ACG CAGCTGCTCATGAA GTTATCGAAGGTCAG TERM 3076 2509815 - 2509790 - g 88 -11.3 -3.78193 | gap 1, opp_overlap 2509788 2509788, overlap 2509788 GATTAAAGATAAACA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2509500 - 2511227 + | phosphoenolpyruvate-protein phosphotransferase crr 2511268 - 2511777 + | glucose-specific PTS system component TERM 3077 2511790 - 2511821 + T 95 -16.8 -2.70932 | opp_overlap 2511797, overlap 2511797 2511819 TAATTCTTGCCGCAG TGAAAAATGGCGCC CATC GGCGCCATTTTTTA TGCTTCCGCCAGCGG TERM 3078 2511814 - 2511797 - T 100 -12.7 -4.65895 | opp_overlap 2511790 2511797 TGCCGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTATGCTTCCG TERM 3079 2511797 - 2511814 + T 100 -12.7 -5.37345 | opp_overlap 2511797, overlap 2511790 TGCCGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTATGCTTCCG pdxK 2512670 - 2511819 - | pyridoxal kinase TERM 3080 2512110 - 2512123 + g 77 -6.7 -4.56597 | CACCCATTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA TERM 3081 2512992 - 2513002 + G 72 -6.8 -4.25056 | GTAACCGCATTGACA CTGC CGA GCAG TTTATTGATAAGGTA yfeK 2512775 - 2513149 + | hypothetical protein TERM 3082 2513908 - 2513946 + T 82 -11.2 -3.62046 | gap 1, opp_overlap 2513909, overlap 2513909 ACACGAAAATTAAAA ACTGCATTTGTCGGCAG CAACAA CTGCCGACAAAT-CAGA TTATTGACAAAGTGC TERM 3083 2513909 - 2513945 + T 87 -14.7 -2.77013 | gap 1, opp_overlap 2513909, overlap 2513908 CACGAAAATTAAAAA CTGCATTTGTCGGCAG CAACAA CTGCCGACAAAT-CAG ATTATTGACAAAGTG TERM 3084 2513945 - 2513909 - T 100 -15.4 -5.1166 | gap 1, opp_overlap 2513909 2513908 CACGAAAATTAAAAA CTGCATTTGTCGGCAGC AACA ACTGCCGACAAAT-CAG ATTATTGACAAAGTG TERM 3085 2514016 - 2513959 - T 75 -11.3 -2.96164 | opp_overlap 2513954 2513964 2513966, overlap 2513958 AGATTATTGACAAAG TGCACTTTGTTTATGCCGGATGCGGCG TAAA CGCCTGATCCGGCATAAAAATATTGCT AATTCAATATATTGC TERM 3086 2513964 - 2514011 + T 81 -12.8 -3.28537 | opp_overlap 2513958 2513959, overlap 2513954 2513966 ATTGACAAAGTGCAC TTTGTTTATGCCGGATGCGGCG TAAA CGCCTGATCCGGCATAAAAATA TTGCTAATTCAATAT TERM 3087 2513966 - 2514009 + T 100 -15.4 -3.20494 | opp_overlap 2513958 2513959, overlap 2513954 2513964 TGACAAAGTGCACTT TGTTTATGCCGGATGCGGCG TAAA CGCCTGATCCGGCATAAAAA TATTGCTAATTCAAT cysM 2515020 - 2514109 - | cysteine synthase B TERM 3088 2515132 - 2515105 - R 89 -9.1 -4.72272 | gap 1, opp_overlap 2515105 2515122 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysA 2516251 - 2515154 - | sulfate/thiosulfate transporter subunit cysW 2516690 - 2516241 - | sulfate transport system permease W protein cysU 2517949 - 2517116 - | sulfate/thiosulfate transporter subunit cysP 2518965 - 2517949 - | thiosulfate transporter subunit TERM 3089 2519256 - 2519233 - R 87 -11 -3.93038 | TAGTTCAAGACGAAA TCCTCCCCAC ACAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2520060 - 2519269 - | short chain dehydrogenase yfeT 2521047 - 2520247 - | hypothetical protein TERM 3090 2522075 - 2522057 - g 79 -2.4 -5.1925 | gap 1 GCAGAAGCTAAAAAA CGCC-TG GATCAA CACGGCG GCTTTATTCGTCAGG murQ 2521211 - 2522107 + | N-acetylmuramic acid-6-phosphate etherase TERM 3091 2522290 - 2522306 + G 84 -7.9 -4.60487 | CGTCATTTTGACCAG CGACCAG GTG CAGGTCG TTTTTGGGCCTGGTA murP 2522111 - 2523535 + | N-acetylmuramic acid phosphotransfer permease TERM 3092 2523691 - 2523664 - T 100 -14.2 -5.16071 | opp_overlap 2523664 AAGCAGTAATAAAAA GGCCAGTCAGTA ATGT TACTGCCTGGCC TTTAATCAATGAATC TERM 3093 2523664 - 2523691 + T 100 -14.2 -3.767 | opp_overlap 2523664 AAGCAGTAATAAAAA GGCCAGTCAGTA ATGT TACTGCCTGGCC TTTAATCAATGAATC TERM 3094 2523722 - 2523712 - T 71 -6.8 -4.10331 | TCAATGAATCAGAAA CGCT TAC AGCG CCATCAACTTGTCCA S2632 2524614 - 2523715 - | hypothetical protein TERM 3095 2523761 - 2523771 + g 72 -8.2 -3.72576 | GCGAAATAATAGCCG CCGG TTA CCGG TTTGGTGAAACGCAA TERM 3096 2524149 - 2524174 + g 74 -6 -4.54047 | opp_overlap 2524141 2524140, overlap 2524140 2524151 TGATAACCGCCACTT CGCGGCGCGT CTCTTC ACCCGCCGGG TTTTCTGTACCGTCA TERM 3097 2524654 - 2524636 - R 90 -10.3 -4.20868 | opp_overlap 2524636 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT TERM 3098 2524636 - 2524654 + r 79 -10.3 -3.63341 | opp_overlap 2524636 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT S2633 2525285 - 2524710 - | hypothetical protein S2634 2525795 - 2525346 - | hypothetical protein TERM 3099 2525590 - 2525574 - G 74 -2.1 -5.06816 | overlap 2525575 2525576 ACCGCTCAACAAAAA CGCCAGC ACC GCCGGAA TACCGGGAATCAGCC S2635 2526207 - 2525782 - | putative acetyltransferase TERM 3100 2527222 - 2527211 - g 72 -5.8 -4.36914 | opp_overlap 2527211, overlap 2527212 CGTTTCGTCAGAAAA TCGC CACA GCGA TTGCTGAAGGCGTGA amiA 2526421 - 2527290 + | N-acetylmuramoyl-l-alanine amidase I TERM 3101 2527519 - 2527565 + T 100 -17.5 -3.69323 | gap 2 GCCTGCTTCCGCCAC CGCTCATCGCC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCG TTTCACTGGTAGTGC TERM 3102 2527612 - 2527623 + T 88 -3.6 -5.7946 | overlap 2527610 TGTTCCCACCAGCCA CGCG AATG TGCG TTTTTTTATTGCCGA TERM 3103 2527826 - 2527852 + T 83 -10.8 -3.81951 | opp_overlap 2527817 2527819 2527829, overlap 2527829 CTCAAACATCGCAAC GAACAGCGCGGC ATT GGCGGGCTGTTC TTTGATGATCTGAAC yfeG 2528760 - 2528200 - | putative ARAC-type regulatory protein TERM 3104 2528681 - 2528715 + g 70 -7.1 -4.02456 | gap 2, opp_overlap 2528701, overlap 2528709 2528711 TTCTCGCAAAACGTC GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC TTTATGCTGCTCTTT S2639 2529798 - 2529298 - | hypothetical protein TERM 3105 2529346 - 2529378 + g 70 -4.8 -4.56597 | overlap 2529348 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCCAGCGGCCA S2641 2530470 - 2529811 - | hypothetical protein TERM 3106 2530613 - 2530626 + H 100 -9.5 -5.21709 | opp_overlap 2530611 2530612 GCGGGTCAGCAAAGG GGGGC AAAT GCCCC TTTTTTCATGTCAGA TERM 3107 2530761 - 2530746 - H 74 -6.8 -4.32402 | overlap 2530758 CTGCAAGCAAAATAA GCCGCA AAAA TGCGAC CCCATGTTTACTAGC TERM 3108 2530920 - 2530897 - H 100 -7.4 -5.76949 | overlap 2530899 2530900 GACGCTGAAAAAAAA TAGGTGGGCA TTTT TGCCCACTCA CTAGCCGCAAATTTG TERM 3109 2530918 - 2530899 - H 79 -7.8 -4.52949 | overlap 2530897 2530900 CGCTGAAAAAAAATA GGTGGGCA TTTT TGCCCACT CACTAGCCGCAAATT TERM 3110 2530917 - 2530900 - H 79 -11.3 -3.30685 | overlap 2530899 2530897 GCTGAAAAAAAATAG GTGGGCA TTTT TGCCCAC TCACTAGCCGCAAAT S2642 2531823 - 2532224 + | hypothetical protein TERM 3111 2532450 - 2532464 + F 100 -9.2 -5.14645 | opp_overlap 2532449 2532450 TGCAGTGAACACAAG CGGGCG CAA TGCCCG TTTTTATTGCCTTAT TERM 3112 2532634 - 2532618 - f 100 -7.2 -5.81412 | TGCAGGCAAAAAAAA CCCGCC GGAGA AGCGGG AAATAGAGACATATC TERM 3113 2533225 - 2533235 + G 70 -4.6 -4.56978 | AGATGGATTTATGAC CCTG AAG CGGG TTTATTGTTTAGCCG S2643 2533162 - 2533557 + | hypothetical protein TERM 3114 2533779 - 2533807 + G 72 -6.7 -4.1721 | opp_overlap 2533778 2533767 2533779, overlap 2533767 GAAGGCACTGCAAAG CGGCGACTCATTT GCG AATTAAGTCGTCG TTTTGGCGTGTCAAT S2644 2533575 - 2533838 + | hypothetical protein TERM 3115 2534139 - 2534125 - g 72 -7.8 -3.9534 | ATGGAGATGTACAAA CAGAGC GGT GCTCCG AATCCCGATGAGTAC S2645 2533861 - 2534403 + | hypothetical protein TERM 3116 2534435 - 2534418 - f 100 -10.5 -4.77775 | opp_overlap 2534418 ATCGGATAAAAGAAA GCCGGGA ATTA CCCCGGC TGACTTAACAATGTG TERM 3117 2534701 - 2534690 - g 71 -3 -4.75219 | GAACTATCAATAAAA TCAT CGAC ATGA AATCGGGGCCGAGCA S2646 2534500 - 2534829 + | hypothetical protein S2647 2534868 - 2535074 + | hypothetical protein S2648 2535659 - 2535871 + | hypothetical protein S2649 2536123 - 2537583 + | putative amino acid antiporter TERM 3118 2538489 - 2538477 - T 73 -7.7 -4.14511 | AACTGCACCCCAAAA GTTGG ACA CCAAC TGAGTAAGGTGCATT TERM 3119 2538532 - 2538516 - T 71 -8 -3.92373 | CATTTTATGGACAAA CCCAGT TACAT ACTGGG TAGTGCATCCAATTA S2650 2538940 - 2538545 - | iso-IS1 ORF2 TERM 3120 2538970 - 2538985 + r 70 -2.5 -5.0538 | overlap 2538958 2538971 CAGGCGAAGAAGTTA TTCGC TTTGGC GCGAG TTTTTTAAAGTCCGG S2651 2539239 - 2538967 - | IS1N orfA TERM 3121 2540795 - 2540744 - R 71 -7.8 -3.85698 | gap 1, opp_overlap 2540794, overlap 2540745 GCCGTTGTTCAGAAA GGGTTTGCGCCCCGGCTCCGTGACC GGC GATCACGGATTCGAGGTGCGG-CCC GGCGCTGGCGACGAC TERM 3122 2540794 - 2540828 + r 71 -3.5 -4.90266 | gap 1, opp_overlap 2540744 2540745 2540815, overlap 2540796 2540815 GATTCGAGGTGCGGC CCGGCGCTG-GCGA CGACAAAA TCGCCCAGCGACTG TTTTTCCTTCATCAC TERM 3123 2540825 - 2540815 - R 77 -6.8 -4.46212 | opp_overlap 2540815 2540796 2540794 CTGGCGACGACAAAA TCGC CCA GCGA CTGTTTTTCCTTCAT S2654 2541585 - 2541106 - | hypothetical protein S2655 2542005 - 2541598 - | hypothetical protein TERM 3124 2541768 - 2541782 + g 82 -11.4 -3.53761 | opp_overlap 2541767 2541764 TCAGCGCTAAATCAC CGGCGA TCA TCGCCG TTTCGCCGGGAGTTA TERM 3125 2542209 - 2542180 - R 100 -15.1 -4.27617 | opp_overlap 2542170, overlap 2542181 TATATTTCAGGAAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAGAATGA TERM 3126 2542208 - 2542181 - R 100 -18.6 -3.16088 | opp_overlap 2542170, overlap 2542180 ATATTTCAGGAAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAGAATG S2656 2544505 - 2542226 - | malic enzyme TERM 3127 2542662 - 2542641 - G 70 -5.1 -4.4261 | gap 1, overlap 2542642 GGCTCAATACCAAAA CGACGGACAG TTT CTG-CCGCCA TCAAGGTGATCTCCG TERM 3128 2543299 - 2543278 - G 72 -10.1 -3.32769 | CGTCGAAATCAGCAA TCGGACGCG TCGC CACGCCCGA CTCCATCGCCGCTTT TERM 3129 2543944 - 2543954 + g 71 -3.2 -4.82901 | opp_overlap 2543933 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3130 2544569 - 2544541 - H 78 -6.1 -4.55697 | gap 1, opp_overlap 2544559 ACGTTCACAAATAAA GTGTGTGGGCAA CAGCCC CTGCCCACA-AC GTGGCGCACATTATT talA 2544794 - 2545744 + | transaldolase A TERM 3131 2546066 - 2546050 - g 74 -7.9 -4.13945 | AGTTGCATTCGAAAA CCCCAGG CCA CCCGGAG ATTGGCTATACGCCA tktB 2545764 - 2547767 + | transketolase S2659 2548913 - 2547870 - | hypothetical protein TERM 3132 2548912 - 2548901 - G 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAG CGCA TGGACGGTACGACCC yffH 2549614 - 2549039 - | hypothetical protein TERM 3133 2549615 - 2549664 + r 79 -9.3 -4.03234 | overlap 2549616 GATTTGTTGCGTCAT ACCGACTCCACAGCGCGAAATGA ACAA TTATATTACGCTGTGAAGTCGGG TTTGTCTGCGCAGGC TERM 3134 2549616 - 2549663 + r 80 -12.8 -3.01726 | overlap 2549615 ATTTGTTGCGTCATA CCGACTCCACAGCGCGAAATGA ACAA TTATATTACGCTGTGAAGTCGG GTTTGTCTGCGCAGG yffG 2551661 - 2549682 - | putative oxidoreductase Fe-S binding subunit TERM 3135 2551885 - 2551907 + H 71 -7.6 -3.91792 | opp_overlap 2551882, overlap 2551885 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3136 2551885 - 2551908 + H 86 -5.2 -5.55698 | gap 1, opp_overlap 2551882, overlap 2551885 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3137 2552602 - 2552574 - H 78 -5.9 -4.81212 | opp_overlap 2552584 GTCAGTAGAAGAAAA GACCCGCGATCTC CAC GAGACCAAGCGTC GTCTGGAGGTGTTGT TERM 3138 2553373 - 2553340 - H 72 -8.7 -3.66874 | opp_overlap 2553332 2553332, overlap 2553323 CCAACGCCAGCGAAA TCGCCGTCAGTTGCG TCAC CGCGCCGGACGGCAA TCACACGGTTTATAT TERM 3139 2553845 - 2553864 + G 82 -2.8 -5.26875 | gap 1, opp_overlap 2553836, overlap 2553847 2553848 GACAATCCTGTTGTG TCTGACAGG TAC CCTGGC-GA TTTTTTCATTGCCCG TERM 3140 2554672 - 2554662 - g 70 -6.8 -4.07568 | GGGTTGGGGGTAAAA CTGG CCT CCAG CGCAAACGAAATGGC TERM 3141 2555780 - 2555763 - g 72 -6.9 -4.17906 | AACCAAATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCACCAGCAATT acrD 2553786 - 2556899 + | aminoglycoside/multidrug efflux system TERM 3142 2556939 - 2556904 - f 82 -11.4 -3.53444 | opp_overlap 2556911, overlap 2556911 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCCAATG TGTCGCCTTTTTCA ACTTTCCGATTAAGA TERM 3143 2556932 - 2556911 - f 91 -7.3 -5.57396 | opp_overlap 2556911, overlap 2556904 ATAAGCAATAAAAAA GGCGACA TGCCAATG TGTCGCC TTTTTCAACTTTCCG TERM 3144 2556911 - 2556932 + F 84 -8.7 -4.70879 | opp_overlap 2556904 2556911 ATAAGCAATAAAAAA GGCGACATG CCAA TGTGTCGCC TTTTTCAACTTTCCG TERM 3145 2556950 - 2556974 + F 74 -11.5 -2.79609 | opp_overlap 2556953 2556956, overlap 2556949 2556947 2556953 2556956 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCGGGTTCTTG CTGTTTATACTTTGT TERM 3146 2556953 - 2556971 + F 82 -11 -3.52009 | opp_overlap 2556953 2556956, overlap 2556950 2556949 2556947 2556956 CAACTTTCCGATTAA GAACCTGC TCA GCGGGTTC TTGCTGTTTATACTT TERM 3147 2557687 - 2557655 - g 72 -4.8 -4.64676 | opp_overlap 2557662 CTACCCGCAATAAAA TCACCGATGCGGCC TCTGC GGCGGCATTAATGA CTGAAATGCCTGCAA yffB 2557438 - 2557794 + | hypothetical protein dapE 2557798 - 2558925 + | succinyl-diaminopimelate desuccinylase TERM 3148 2559235 - 2559183 - T 70 -10.6 -2.57931 | gap 1, opp_overlap 2559183 2559182 2559225, overlap 2559182 2559215 CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATGG TGAA CGATC-CCTGATGCGACGCTCACGC GTCTTATCAGGCCAG ypfH 2559961 - 2559263 - | esterase YpfH ypfI 2562050 - 2560035 - | hypothetical protein TERM 3149 2560184 - 2560194 + g 79 -4.6 -4.96848 | opp_overlap 2560179 TGGTACATAACTGCG CGTC ACT GGCG TTTTTCTGTAAACGC TERM 3150 2561661 - 2561650 - G 72 -5.8 -4.38154 | AGATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA S2668 2562928 - 2562065 - | hypothetical protein TERM 3151 2562587 - 2562550 - G 72 -9.7 -3.30338 | opp_overlap 2562558 AGAACGGCCCCATAA TGGACTGGCCCGCCCCG CAGC CGGTGCGCGTCATTCCA CGGTACATGACCAGC purC 2563809 - 2563096 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3152 2563160 - 2563196 + g 72 -5.7 -4.55295 | opp_overlap 2563173, overlap 2563162 ATCAGGCCACCGAGG CTCTGGCGGAAACGGTC TTT GTCCATTTTCTCCAGTG TTTCTTTGTCCCACA TERM 3153 2563991 - 2564018 + r 73 -4 -4.90266 | opp_overlap 2563995, overlap 2563993 2563995 CGTATCATATCAGAA AAAAGGGCCGGA TGAT TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3154 2564014 - 2563995 - R 100 -11.4 -5.34555 | opp_overlap 2563995 2563993 2563991 TCATATCAGAAAAAA GGGCCGGA TGAT TCCAGCCC TGTATTTTTACTTGC TERM 3155 2563995 - 2564014 + r 72 -9.2 -3.61182 | opp_overlap 2563995, overlap 2563993 2563991 TCATATCAGAAAAAA GGGCCGGA TGAT TCCAGCCC TGTATTTTTACTTGC nlpB 2565056 - 2564022 - | lipoprotein TERM 3156 2564196 - 2564214 + g 76 -11 -3.41878 | GCCCAGTTCCTGCCA GTCGCTGT CAG ACAGCGGC TTATAAGTTACGGCC TERM 3157 2564645 - 2564673 + g 77 -6 -4.62069 | opp_overlap 2564626, overlap 2564648 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2565951 - 2565073 - | dihydrodipicolinate synthase bcp 2566669 - 2567139 + | thioredoxin-dependent thiol peroxidase TERM 3158 2567950 - 2567938 - g 82 -2.6 -5.35815 | opp_overlap 2567941 CAGATGAAAGAAAAA CAGC GCCTT GCCG CAAGCTGGTTTGCCA TERM 3159 2567971 - 2567983 + G 73 -9.1 -3.6682 | TGGTTTGCCAATGGC GGGGA GTC TCCCC TTTCCCTCACTCAGG hyfA 2567392 - 2568009 + | hydrogenase 4 Fe-S subunit TERM 3160 2570627 - 2570639 + G 72 -7.7 -3.95022 | CTGCTTCATTGAGAT GGGAA AAA TTCCC TTTGATGTTGCTGAA TERM 3161 2570887 - 2570902 + G 79 -2.4 -5.2189 | opp_overlap 2570885 CAATCGCAGAAAACA CGCTGG CACG CGGGCG TTTTTTACTCATTCA hyfC 2570037 - 2570984 + | hydrogenase 4 membrane subunit TERM 3162 2572161 - 2572173 + G 73 -9.1 -3.69283 | AATTACCGGTGTGCC GCCGT TCA ACGGC TTCTTCAGTAAATTC hyfD 2571001 - 2572440 + | hydrogenase 4 subunit D hyfE 2572452 - 2573102 + | hydrogenase 4 membrane subunit TERM 3163 2573997 - 2574009 + G 95 -9.1 -4.94972 | CGGCATGTTGTCGGT TGCCG TGG CGGCA TTTTTCATTCTGGTA hyfF 2573107 - 2574693 + | hydrogenase 4 subunit F hyfH 2576407 - 2576952 + | hydrogenase 4 subunit H hyfI 2576949 - 2577707 + | hydrogenase 4 Fe-S subunit S2683 2577637 - 2578113 + | putative protein processing element TERM 3164 2580247 - 2580222 - T 93 -10.5 -4.38712 | gap 1 TTGAGCGCCAGAAAA GCGGCAAT-CGC TGA ACGGATTGCCGC CCATAAAATTGCCCG TERM 3165 2581083 - 2581054 - T 84 -8.5 -4.62872 | opp_overlap 2581055 2581057, overlap 2581055 2581057 AGGAATCCTGAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTAT TTATTTACGTCAGGA TERM 3166 2581055 - 2581082 + T 100 -12 -4.46112 | opp_overlap 2581054 2581055 2581057, overlap 2581057 GGAATCCTGAAAAAT CAGCCCGGCGAA ACAG TTCGTCGGGCTA TTTATTTACGTCAGG TERM 3167 2581082 - 2581055 - T 82 -12 -3.37 | opp_overlap 2581055 2581057, overlap 2581054 2581057 GGAATCCTGAAAAAT CAGCCCGGCGAA ACAG TTCGTCGGGCTA TTTATTTACGTCAGG TERM 3168 2581080 - 2581057 - T 81 -12.4 -3.24823 | opp_overlap 2581057 2581055, overlap 2581055 2581054 AATCCTGAAAAATCA GCCCGGCGAA ACAG TTCGTCGGGC TATTTATTTACGTCA TERM 3169 2581057 - 2581080 + T 100 -14.6 -3.83744 | opp_overlap 2581055 2581054 2581057, overlap 2581055 AATCCTGAAAAATCA GCCCGGCGAA ACAG TTCGTCGGGC TATTTATTTACGTCA TERM 3170 2581107 - 2581142 + T 74 -8.2 -3.94877 | opp_overlap 2581110, overlap 2581108 GTCAGGAATCCTGAA AAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGA TTATTCTTGCGCGAT TERM 3171 2581108 - 2581141 + T 78 -11.7 -2.96444 | opp_overlap 2581110, overlap 2581107 TCAGGAATCCTGAAA AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG ATTATTCTTGCGCGA TERM 3172 2581139 - 2581110 - T 100 -16.5 -4.62872 | opp_overlap 2581108 2581107 AGGAATCCTGAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA AGATTATTCTTGCGC perM 2582204 - 2581143 - | putative permease S2687 2582417 - 2583880 + | hypothetical protein S2688 2583901 - 2584260 + | putative oxidoreductase S2689 2585139 - 2584393 - | DNA replication initiation factor TERM 3173 2585149 - 2585191 + r 76 -7.7 -4.26393 | opp_overlap 2585145, overlap 2585155 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2586478 - 2585189 - | uracil transporter TERM 3174 2585559 - 2585533 - G 72 -8.6 -3.767 | overlap 2585548 TACCGACGCAGGAAA GCAGGATAGCGA AAA TCGCCGCCCCGC CGATAACCCAGGTAC TERM 3175 2585698 - 2585713 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3176 2586519 - 2586553 + r 83 -4.3 -5.44198 | opp_overlap 2586527, overlap 2586522 2586527 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3177 2586522 - 2586550 + r 78 -6 -4.74161 | opp_overlap 2586527, overlap 2586519 2586527 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3178 2586527 - 2586545 + r 90 -10.3 -4.2711 | opp_overlap 2586527, overlap 2586522 2586519 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT TERM 3179 2586545 - 2586527 - R 100 -11 -5.81412 | opp_overlap 2586527 2586522 2586519 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT upp 2587190 - 2586564 - | uracil phosphoribosyltransferase purM 2587499 - 2588551 + | phosphoribosylaminoimidazole synthetase TERM 3180 2588692 - 2588661 - g 100 -13.7 -3.72027 | opp_overlap 2588683 2588687, overlap 2588658 AGTTTTCAGCAATAA GGCCGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3181 2588687 - 2588699 + G 72 -10.5 -3.02144 | opp_overlap 2588661, overlap 2588683 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACGCATAC purN 2588551 - 2589189 + | phosphoribosylglycinamide formyltransferase TERM 3182 2589207 - 2589226 + F 100 -10.7 -4.74504 | opp_overlap 2589206 2589207 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3183 2589226 - 2589207 - f 72 -10.7 -2.78679 | opp_overlap 2589207, overlap 2589206 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3184 2591197 - 2591160 - g 70 -6.9 -4.10657 | overlap 2591161 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2589361 - 2591427 + | polyphosphate kinase TERM 3185 2591455 - 2591481 + G 74 -10.8 -3.23853 | overlap 2591453 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2591432 - 2592973 + | exopolyphosphatase TERM 3186 2592979 - 2593007 + F 100 -18.2 -3.6279 | CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT S2697 2594187 - 2594489 + | IS600 orfA S2698 2594630 - 2595343 + | IS600 orfB TERM 3187 2596406 - 2596395 - f 76 -2.2 -5.32599 | overlap 2596387 GATAAAAGAGAAAAA CCTC ACCG GAAG AAATATGCGCGAAAG S2700 2596873 - 2597064 + | hypothetical protein S2701 2597375 - 2597893 + | putative outer membrane lipoprotein S2702 2597909 - 2598448 + | hypothetical protein TERM 3188 2598488 - 2598517 + F 73 -10.1 -3.41693 | opp_overlap 2598493, overlap 2598493 TGATTCTTGAAGATA AAAAACCCTCTGT AGTA ACGGAGGGTTTTG TTCATTCATAGTGCA TERM 3189 2598512 - 2598493 - f 100 -7.8 -5.47159 | opp_overlap 2598488 2598493 CTTGAAGATAAAAAA CCCTCTGT AGTA ACGGAGGG TTTTGTTCATTCATA TERM 3190 2598493 - 2598512 + F 100 -10 -4.80178 | opp_overlap 2598493, overlap 2598488 CTTGAAGATAAAAAA CCCTCTGT AGTA ACGGAGGG TTTTGTTCATTCATA TERM 3191 2599371 - 2599383 + G 82 -3.3 -5.24531 | overlap 2599372 CCGCCTTGTCCTTGA TCCCG GCA TGGGG TTTTTTCTGGGGGCT S2703 2598850 - 2599665 + | dihydropteroate synthase TERM 3192 2599845 - 2599822 - g 71 -9.5 -3.56092 | opp_overlap 2599816 2599836, overlap 2599804 2599803 CGATGACGGCGGAAA CCGCCTTGC GCGTCG GCATGGCGG CTGGCCGTGTCTTTC S2704 2599752 - 2600054 + | phosphoglucosamine mutase S2705 2601723 - 2600230 - | putative transposase S2706 2602158 - 2601934 - | hypothetical protein parA 2602892 - 2602155 - | resolvase TERM 3193 2603187 - 2603152 - g 93 -10.4 -4.56597 | gap 1, opp_overlap 2603155 2603160 2603161, overlap 2603153 2603155 TGGCCGCCGGAAAAA TCAGCGAAG-CGGCCGG CAT CCCGCCGTCTTCGCTAT CCTTCCACCTGAAAG TERM 3194 2603186 - 2603153 - g 95 -13.9 -3.33744 | gap 1, opp_overlap 2603155 2603160 2603161, overlap 2603152 2603155 GGCCGCCGGAAAAAT CAGCGAAG-CGGCCGG CAT CCCGCCGTCTTCGCTA TCCTTCCACCTGAAA TERM 3195 2603155 - 2603184 + G 86 -14.3 -2.90723 | gap 1, opp_overlap 2603153 2603152 2603155, overlap 2603160 2603161 CCGCCGGAAAAATCA GCGAAG-CGGCCGG CAT CCCGCCGTCTTCGC TATCCTTCCACCTGA TERM 3196 2603184 - 2603155 - g 89 -14.3 -3.23708 | gap 1, opp_overlap 2603155 2603160 2603161, overlap 2603153 2603152 CCGCCGGAAAAATCA GCGAAG-CGGCCGG CAT CCCGCCGTCTTCGC TATCCTTCCACCTGA TERM 3197 2603276 - 2603294 + G 84 -11 -3.85698 | GGCGAACTTTTCGAC GGCCACTA ACC TGGTGGCC TTTCTCACGGAAAAC S2708 2603040 - 2603372 + | putative transcriptional regulator TERM 3198 2603770 - 2603754 - g 71 -9.3 -3.53091 | overlap 2603755 ATCTGCCGCTTGAAA TGGCCGG CAT CCGGCCG ACCCAAGGCCGCACC TERM 3199 2603769 - 2603755 - g 77 -12.8 -2.71712 | overlap 2603754 TCTGCCGCTTGAAAT GGCCGG CAT CCGGCC GACCCAAGGCCGCAC TERM 3200 2604081 - 2604050 - g 72 -8.6 -3.75629 | gap 1, opp_overlap 2604048 2604050 2604051, overlap 2604031 2604051 TATTCCGAACGGAAA GCGGCCGGCCACGTC ATC GACGAGGCCA-CCGA TCTTTCATCCATCGC TERM 3201 2604080 - 2604051 - g 78 -12.1 -2.85056 | gap 1, opp_overlap 2604051 2604050 2604048, overlap 2604031 2604050 ATTCCGAACGGAAAG CGGCCGGCCACGTC ATC GACGAGGCCA-CCG ATCTTTCATCCATCG S2709 2603369 - 2604136 + | putative arsenical resistance protein S2710 2604133 - 2604639 + | arsenate reductase S2711 2604636 - 2605703 + | putative sodium bile acid symporter family protein TERM 3202 2605871 - 2605859 - T 77 -10.5 -3.4072 | opp_overlap 2605867 CAGGCTGCATGAGAA GGCCG ACC CGGCC CGCGCCGTTTCCACT TERM 3203 2606025 - 2606049 + T 80 -9.9 -3.84961 | opp_overlap 2606026, overlap 2606026 AGTGAAGATTGAAAA AGGCGGCCAGT TCG AGTGGCCGCCC TTTCGTCATTAGCTG TERM 3204 2606048 - 2606026 - T 100 -13.4 -4.74706 | opp_overlap 2606026 2606025 GTGAAGATTGAAAAA GGCGGCCAGT TCG AGTGGCCGCC CTTTCGTCATTAGCT TERM 3205 2606026 - 2606048 + T 82 -13.4 -2.90494 | opp_overlap 2606026, overlap 2606025 GTGAAGATTGAAAAA GGCGGCCAGT TCG AGTGGCCGCC CTTTCGTCATTAGCT TERM 3206 2606343 - 2606314 - T 79 -10.6 -3.64822 | AGGTGTTGATTGAAA GTGCCGGGCTGG TTGTGG CCAGCCCGGTGC GCCTACAGGTACAGC TERM 3207 2606552 - 2606581 + T 82 -12.1 -3.30443 | CTTCCCTTGGCGCTT CATCCAGGGCCGC CAAT GCGGCCATGTATG TTGATGTCGTCATCG S2715 2607087 - 2606599 - | hypothetical protein trbL 2608043 - 2607237 - | putative mating pair formation protein trbJ 2609061 - 2608282 - | putative mating pair formation protein TERM 3208 2609022 - 2609002 - G 72 -7.6 -3.86897 | gap 1 GGTAGTGGTGATAAA GCCGGTTGC GAGT GCAAC-GGC TAGAGCGGTTTTTTT TERM 3209 2609034 - 2609048 + g 70 -5.8 -4.20696 | CGGCTAGAGCGGTTT TTTTAG CCG CTAAAA TTTTGGACTTCATGG S2719 2609390 - 2609202 - | putative stabilization protein TERM 3210 2609580 - 2609528 - R 75 -10 -3.61398 | gap 1, opp_overlap 2609543 2609548, overlap 2609529 2609541 2609548 CCCCGGCGCGAATAA GGGAC-AGTGAAGATAGATAACCGG CTTG CCGGTTAGCTAACTTCACCCATCCT GCCCGCATTTCACCC TERM 3211 2609579 - 2609529 - R 82 -13.5 -2.76696 | gap 1, opp_overlap 2609543 2609548, overlap 2609528 2609541 2609548 CCCGGCGCGAATAAG GGAC-AGTGAAGATAGATAACCGG CTTG CCGGTTAGCTAACTTCACCCATCC TGCCCGCATTTCACC TERM 3212 2609566 - 2609541 - R 74 -10.5 -3.13071 | opp_overlap 2609543 2609548, overlap 2609529 2609528 2609548 AAGGGACAGTGAAGA TAGATAACCGG CTTG CCGGTTAGCTA ACTTCACCCATCCTG TERM 3213 2609796 - 2609772 - R 83 -9.9 -4.10781 | overlap 2609775 AACAATCGACACAAA CCATTCGCCCC GAT GGGGCGAGTTG GACGCCAAAAAAGAA TERM 3214 2609793 - 2609775 - R 73 -10.2 -3.07534 | overlap 2609772 AATCGACACAAACCA TTCGCCCC GAT GGGGCGAG TTGGACGCCAAAAAA TERM 3215 2609829 - 2609809 - R 85 -6.8 -5.0538 | TTGGACGCCAAAAAA GAAGGGCA TAACC CGCCCCTC AAGTGTCAATGAACA TERM 3216 2610016 - 2609988 - R 72 -9.2 -3.61398 | opp_overlap 2609988 2609985, overlap 2609991 2609994 CCTGCTTGGTAATAA TAAGAATAATAA TCTTC TTATTATTCTTA CCGAACGAATGGGCA TERM 3217 2610240 - 2610220 - R 82 -11.1 -3.53012 | opp_overlap 2610223, overlap 2610223 CTTCTTGGCGTTAAA CCATCGGCC TAT GGCCGATTG ATAAAGCCCGCCAGG TERM 3218 2610237 - 2610223 - R 74 -11.4 -2.90496 | opp_overlap 2610223, overlap 2610220 CTTGGCGTTAAACCA TCGGCC TAT GGCCGA TTGATAAAGCCCGCC TERM 3219 2610223 - 2610237 + r 77 -11.4 -3.14132 | opp_overlap 2610220 2610223 CTTGGCGTTAAACCA TCGGCC TAT GGCCGA TTGATAAAGCCCGCC TERM 3220 2610246 - 2610257 + r 71 -7.2 -4.1552 | opp_overlap 2610246 TGGCCGATTGATAAA GCCC GCCA GGGC TTTATTGGCAAGGTC TERM 3221 2610293 - 2610277 - R 79 -11.5 -3.36492 | TTGGCAAGGTCAGAA CGCGCCC TCA AGGCGCG AGCTGCACCGCGCAT repC 2611304 - 2610423 - | putative replication protein C S2721 2612118 - 2611291 - | putative DNA helicase TERM 3222 2612142 - 2612123 - R 75 -10 -3.5518 | TCAAGAGCCATATAA CTAGCCCT CTAT AGGGCCAG GTCGCGCAGCTTGAT S2722 2612344 - 2612123 - | hypothetical protein S2723 2613694 - 2612492 - | putative integrase TERM 3223 2613950 - 2613933 - R 100 -10.5 -6.28967 | CACAAACAAAAAAAA GCCCGCA ATTA CGCGGGC TTAGCGGCATTTCAT guaA 2615576 - 2613999 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3224 2615638 - 2615616 - R 91 -11.3 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA ATCGGGCGA AGAGAATCAGGAGCC guaB 2617111 - 2615645 - | inositol-5-monophosphate dehydrogenase TERM 3225 2616563 - 2616577 + g 73 -4.2 -4.79667 | overlap 2616574 GTCATCAACCACCAG CGCTTT TTC AACGCG TTTTTCGTGCATTTT xseA 2617273 - 2618643 + | exodeoxyribonuclease VII large subunit S2728 2618891 - 2618640 - | hypothetical protein engA 2620397 - 2618925 - | GTP-binding protein EngA TERM 3226 2620495 - 2620464 - R 100 -13.8 -3.90048 | opp_overlap 2620470, overlap 2620465 2620470 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3227 2620494 - 2620465 - R 100 -17.3 -2.93708 | opp_overlap 2620470, overlap 2620464 2620470 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3228 2620489 - 2620470 - R 95 -11.4 -4.60746 | opp_overlap 2620470, overlap 2620465 2620464 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3229 2620470 - 2620489 + r 79 -9.2 -4.11216 | opp_overlap 2620465 2620464 2620470 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG S2730 2621693 - 2620515 - | outer membrane protein assembly complex subunit YfgL TERM 3230 2620941 - 2620925 - G 78 -8.7 -4.18506 | overlap 2620937 CCAGCGCGAAAACAA CGCCGTT AAC AACGACG GGAGTCGTGTCAACA TERM 3231 2621097 - 2621086 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC S2731 2622324 - 2621704 - | hypothetical protein TERM 3232 2621867 - 2621885 + g 77 -8.2 -4.07687 | GCAGCCCACCCTTCA CCTTTGAT GGT ATCAAGGG TTTTCAGCGCGGCAT TERM 3233 2622136 - 2622148 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2623616 - 2622342 - | histidyl-tRNA synthetase TERM 3234 2623580 - 2623605 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3235 2623689 - 2623643 - R 72 -3 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCC TCAATGTTTC GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 3236 2623718 - 2623698 - R 82 -13.3 -3.00298 | opp_overlap 2623692 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2624846 - 2623719 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2625886 - 2624873 - | hypothetical protein TERM 3237 2626166 - 2626129 - R 100 -12.2 -4.42653 | gap 1, overlap 2626131 ACTTCATTCATAAAA GATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT TERM 3238 2626164 - 2626131 - R 100 -14.8 -3.82117 | gap 1, overlap 2626129 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC yfgB 2627325 - 2626171 - | hypothetical protein TERM 3239 2627087 - 2627107 + g 71 -9 -3.50832 | gap 1, overlap 2627084 TCTTCAACCACTTCC GGTGCGCGG ATTT CCGC-CACC TCTTTCAGTTTGCCG TERM 3240 2627414 - 2627383 - R 91 -8.7 -5.04249 | gap 2, opp_overlap 2627382 2627379 2627378, overlap 2627385 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2627906 - 2627475 - | nucleoside diphosphate kinase TERM 3241 2628277 - 2628264 - R 72 -8.1 -3.66772 | GTAAACGTTTAATAA TCGCG CCAT CGCGA ACGCCTGTCAGCTGC TERM 3242 2628431 - 2628456 + r 71 -7.6 -3.96148 | gap 2 TCTTGCTTCGCCTGC GGGCAGTCAGCG GCGA CGC-G-CTGCCC TTTGTCATCCAGCCA S2738 2631367 - 2630171 - | ISSfl4 orf TERM 3243 2630224 - 2630196 - G 71 -3.2 -4.82901 | TGCGGGGTATAAAAA GTCCCG-TCGCGCA TCA TG-GCGAACAGAAC GTCGCAGCGTCGTCT TERM 3244 2631204 - 2631229 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 2631184, overlap 2631190 2631205 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 3245 2632130 - 2632088 - R 76 -11.6 -2.74292 | gap 1, opp_overlap 2632088 2632091 2632095 2632103, overlap 2632090 2632095 2632103 GAAATAAGTATATTA CAGGCAATAAAAAACCGCC GAATTT GGCGTTTTTTTATTGC-TG GTCTGGTTCGCGGCC TERM 3246 2632088 - 2632131 + r 79 -12.6 -2.90194 | opp_overlap 2632088 2632090 2632095 2632103, overlap 2632091 2632095 2632103 GAAATAAGTATATTA CAGGCAATAAAAAACCGCCG AATT TGGCGTTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 3247 2632129 - 2632090 - R 74 -10.9 -2.90382 | opp_overlap 2632088 2632091 2632095 2632103, overlap 2632088 2632095 2632103 AATAAGTATATTACA GGCAATAAAAAACCGCC GAATTT GGCGTTTTTTTATTGCT GGTCTGGTTCGCGGC TERM 3248 2632091 - 2632128 + r 90 -15.1 -2.69964 | opp_overlap 2632090 2632088 2632095 2632103, overlap 2632088 2632095 2632103 ATAAGTATATTACAG GCAATAAAAAACCGCCG AATT TGGCGTTTTTTTATTGC TGGTCTGGTTCGCGG TERM 3249 2632103 - 2632116 + r 100 -5.9 -5.84381 | opp_overlap 2632103 2632095 2632090 2632088, overlap 2632095 2632091 2632088 CAGGCAATAAAAAAC CGCCG AATT TGGCG TTTTTTTATTGCTGG TERM 3250 2632450 - 2632420 - R 100 -9.8 -5.00616 | opp_overlap 2632420 2632424 2632427, overlap 2632427 CTTTCCTTTAAAAAA CAAAAAACCGCC AAAATCA GGCGGTTATTTG TTGCTGGTCCGGTTC TERM 3251 2632420 - 2632450 + r 71 -9.8 -3.22223 | opp_overlap 2632420 2632427, overlap 2632424 2632427 CTTTCCTTTAAAAAA CAAAAAACCGCC AAAATCA GGCGGTTATTTG TTGCTGGTCCGGTTC TERM 3252 2632443 - 2632427 - R 100 -6.5 -6.04324 | opp_overlap 2632427 2632424 2632420, overlap 2632420 TTAAAAAACAAAAAA CCGCC AAAATCA GGCGG TTATTTGTTGCTGGT TERM 3253 2632427 - 2632443 + r 72 -6.5 -4.25016 | opp_overlap 2632420 2632427, overlap 2632424 2632420 TTAAAAAACAAAAAA CCGCC AAAATCA GGCGG TTATTTGTTGCTGGT TERM 3254 2632535 - 2632566 + r 79 -9 -4.10144 | gap 1, opp_overlap 2632525 2632538, overlap 2632538 GACAATACTCGCCAG TAACTCTCTTTTTGT CAA GCAA-AAGAGAGTTA TTATTGTTCTGTTAG TERM 3255 2632823 - 2632809 - R 89 -11.4 -4.15884 | opp_overlap 2632795 CCAAGTAAATAATAA CCGGAG TCT CTCCGG CGACAATTTACTGGT TERM 3256 2632872 - 2632895 + r 95 -12.4 -4.3208 | opp_overlap 2632867, overlap 2632874 CAGCAAGTAAGCCCG AATGCCGCCC TTTA GGGCGGCATA TTTTAGATTATCCGG TERM 3257 2632874 - 2632893 + r 100 -15 -3.76167 | opp_overlap 2632867, overlap 2632872 GCAAGTAAGCCCGAA TGCCGCCC TTTA GGGCGGCA TATTTTAGATTATCC sseB 2633674 - 2632898 - | enhanced serine sensitivity protein SseB TERM 3258 2633403 - 2633432 + g 83 -13 -3.02263 | opp_overlap 2633400, overlap 2633407 2633430 2633431 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCGCCTGT TERM 3259 2633775 - 2633810 + r 86 -11.8 -3.51976 | opp_overlap 2633772 2633771 2633787, overlap 2633771 2633778 AATTTGCAGAATTTG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA TTAGTTTACGCCGTT TERM 3260 2633778 - 2633807 + r 81 -13.5 -2.59569 | opp_overlap 2633772 2633771 2633787, overlap 2633775 2633771 TTGCAGAATTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATATTAGTTTACGCC pepB 2635099 - 2633816 - | aminopeptidase B TERM 3261 2633972 - 2633951 - G 70 -6.5 -4.16284 | gap 1, overlap 2633952 2633963 ATAGTTCTCAACAAA GTGCGACAGG AAG CCCGCCGC-C GTGCTCGCGCCTGCC TERM 3262 2635152 - 2635131 - R 100 -13.7 -4.4261 | opp_overlap 2635131 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTCACTCGGCT TERM 3263 2635131 - 2635152 + r 79 -11.5 -3.37522 | opp_overlap 2635131 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTCACTCGGCT yfhJ 2635358 - 2635158 - | hypothetical protein fdx 2635705 - 2635370 - | [2FE-2S] ferredoxin, electron carrer protein hscA 2637557 - 2635707 - | chaperone protein HscA TERM 3264 2637038 - 2637050 + g 76 -9.1 -3.74693 | CATGCAACCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2638089 - 2637574 - | co-chaperone HscB TERM 3265 2638169 - 2638143 - R 84 -8.7 -4.6951 | gap 1, opp_overlap 2638143 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2638508 - 2638185 - | iron-sulfur cluster assembly protein S2748 2638911 - 2638525 - | scaffold protein yfhO 2640153 - 2638939 - | cysteine desulfurase S2750 2640753 - 2640265 - | DNA-binding transcriptional regulator IscR TERM 3266 2640649 - 2640639 - G 75 -6.8 -4.38927 | GTTCCAGATAAGAAA GGGA AAT TCCC TGACGTTCGGAAATA TERM 3267 2640776 - 2640788 + r 91 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3268 2640838 - 2640885 + r 72 -8.6 -3.6715 | overlap 2640840 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 3269 2640840 - 2640883 + r 79 -11.2 -3.4149 | overlap 2640838 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT S2751 2641763 - 2641023 - | putative ATP synthase beta subunit TERM 3270 2641647 - 2641684 + g 76 -7.9 -4.25104 | gap 1, overlap 2641637 2641650 GGAGTCGGGTTTCAC CAGT-GGATTAACCAGCC ACA GATTGGTTAATCCCATTG TTTTCATGGCACGGG TERM 3271 2641650 - 2641681 + g 70 -6 -4.25256 | gap 1, overlap 2641647 GTCGGGTTTCACCAG T-GGATTAACCAGCC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 3272 2641900 - 2641928 + G 79 -12.3 -3.02166 | opp_overlap 2641901, overlap 2641896 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 3273 2641927 - 2641901 - g 87 -13.6 -3.04263 | opp_overlap 2641900 2641896 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2641882 - 2642685 + | inositol monophosphatase S2753 2642830 - 2643684 + | putative enzyme csiE 2643875 - 2645155 + | stationary phase inducible protein CsiE hcaT 2646286 - 2645147 - | putative 3-phenylpropionic acid transporter TERM 3274 2645427 - 2645411 - G 70 -10.1 -3.23216 | opp_overlap 2645411 2645414 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC TERM 3275 2645692 - 2645669 - G 86 -11 -3.9009 | overlap 2645660 2645689 AACGCAGGCCAGAAA GCGCCAGTTC TGGC GAACCAGCGC CAACCACGCAGACCA TERM 3276 2646419 - 2646408 - R 73 -2.2 -5.22794 | gap 1, opp_overlap 2646409, overlap 2646409 ACAAGCACTAAAAAA CTGCG ATC CGC-G ACGCATGTTGCAAAA hcaR 2647336 - 2646446 - | DNA-binding transcriptional regulator HcaR hcaA1 2647472 - 2648833 + | large terminal subunit of phenylpropionate dioxygenase hcaA2 2648830 - 2649348 + | 3-phenylpropionate dioxygenase subunit beta hcaC 2649348 - 2649668 + | 3-phenylpropionate dioxygenase ferredoxin subunit TERM 3277 2650118 - 2650096 - g 77 -10.4 -3.59262 | overlap 2650097 TTTCACACTGTCAAA TGCCGCCTGG TAT CCTGGCGGCG GTGGCCCGCTGTACA TERM 3278 2650117 - 2650097 - g 85 -13.9 -2.75343 | overlap 2650096 TTCACACTGTCAAAT GCCGCCTGG TAT CCTGGCGGC GGTGGCCCGCTGTAC hcaB 2649665 - 2650477 + | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase TERM 3279 2650815 - 2650834 + F 77 -10.7 -3.40371 | opp_overlap 2650810 2650809 TTATAGCAACCGGCG CGGCAGC TCGACC GCTGCCG TTGCTTGATGCACTG yphA 2651734 - 2652228 + | hypothetical protein TERM 3280 2652268 - 2652233 - T 93 -11.8 -3.72695 | opp_overlap 2652235, overlap 2652235 ATCGGCGTTAGGAAA GATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATT TTATAAATTACAGCC TERM 3281 2652266 - 2652235 - T 93 -14.4 -3.44848 | opp_overlap 2652235, overlap 2652233 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG TERM 3282 2652235 - 2652266 + T 100 -16.6 -4.4715 | opp_overlap 2652235 2652233 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG yphB 2653148 - 2652276 - | hypothetical protein yphC 2654254 - 2653160 - | putative oxidoreductase TERM 3283 2653905 - 2653895 - G 74 -8.2 -3.93985 | overlap 2653896 ACAAGAGATAGGAAA GCCG CGG CGGC AGTTCGGGCAAAAAC yphD 2655285 - 2654287 - | putative transport system permease protein TERM 3284 2654686 - 2654699 + g 70 -3.7 -4.63527 | opp_overlap 2654686, overlap 2654687 AACGGCAAAAACCGA GCGCC CGAA GGCGG TTTTTCGGCTAATGA yphE 2656821 - 2655310 - | putative ATP-binding component of a transport system TERM 3285 2655696 - 2655716 + g 74 -2.5 -5.055 | overlap 2655697 2655702 GGATGGTGGACCATT GCAGCAC ACCGTTG GTGCTGA TTTTTTGCCGATTGG TERM 3286 2655774 - 2655787 + g 70 -5.2 -4.41548 | overlap 2655761 GCCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAG TERM 3287 2659601 - 2659611 + H 76 -2.4 -5.4505 | ATCAAACTTGCTTGT CCAC ACT GCGG TTTTTTGTTCAGCGC yphH 2661322 - 2662515 + | putative NAGC-like transcriptional regulator TERM 3288 2662535 - 2662552 + T 77 -11.3 -3.23216 | opp_overlap 2662535 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCATAAAC TERM 3289 2662552 - 2662535 - T 87 -11.3 -4.00066 | opp_overlap 2662535 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCATAAAC glyA 2663966 - 2662713 - | serine hydroxymethyltransferase TERM 3290 2664734 - 2664718 - g 72 -5.7 -4.50661 | opp_overlap 2664720, overlap 2664720 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GTTGGGAAGGTACTC hmpA 2664293 - 2665483 + | nitric oxide dioxygenase glnB 2665866 - 2665528 - | nitrogen regulatory protein P-II 1 yfhA 2667261 - 2665927 - | putative 2-component transcriptional regulator TERM 3291 2666636 - 2666626 - G 72 -8.2 -3.74251 | overlap 2666627 GACAGCGCCAGTAAA CGCG CCA CGCG CATGACCAAACAGCT TERM 3292 2666989 - 2666964 - G 76 -4 -5.01811 | gap 1, overlap 2666965 TGAGGAAACTAAAAA CGCC-CTGCTG TGTTG CAGCAACGGCA TCGGGGATAGAACCA yfhG 2667964 - 2667251 - | hypothetical protein TERM 3293 2668117 - 2668103 - R 72 -2.8 -5.01553 | opp_overlap 2668105, overlap 2668105 AACTGACAAATAAAA TAGCCT GAT AGGATA GGCTGTTAGCATTAT yfhK 2669619 - 2668129 - | putative 2-component sensor protein TERM 3294 2668759 - 2668769 + g 93 -8.2 -4.90266 | overlap 2668744 GCCCTCGCGCATACT CGCC AGT GGCG TTTTTAATTCATGAG TERM 3295 2669644 - 2669614 - G 100 -16.3 -2.91681 | opp_overlap 2669617 2669621, overlap 2669617 2669621 GGGGAAGTTCAGATA CAACAAAGCCGGG AATTA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3296 2669617 - 2669641 + g 100 -15.8 -3.32844 | opp_overlap 2669617 2669614 2669621, overlap 2669621 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3297 2669641 - 2669617 - G 100 -15.8 -3.60412 | opp_overlap 2669617 2669621, overlap 2669614 2669621 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3298 2669637 - 2669621 - R 93 -10.8 -4.42974 | opp_overlap 2669617 2669621, overlap 2669617 2669614 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3299 2669621 - 2669637 + r 90 -10.8 -4.32177 | opp_overlap 2669621 2669617 2669614, overlap 2669617 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3300 2669996 - 2669977 - R 71 -10 -3.15252 | AAATCAATCATTTAA GTGTCGCC AGAA AGCGACAC GGTAAACCACCCATT TERM 3301 2670053 - 2670036 - R 100 -8.4 -5.4492 | opp_overlap 2670036 TACAGACACAAAAAA GCTCCC GGAGTT GGGAGC TTATGATAGTGGTTG TERM 3302 2670036 - 2670053 + r 70 -9.1 -3.45737 | opp_overlap 2670036 TACAGACACAAAAAA GCTCCCG GAGT TGGGAGC TTATGATAGTGGTTG purL 2674001 - 2670114 - | phosphoribosylformylglycinamidine synthase TERM 3303 2672805 - 2672816 + g 74 -2.2 -5.14163 | overlap 2672799 2672798 CAGCTCTTCGCCATT GTGG CTGT TCAC TTTTTCTTCATAAGT TERM 3304 2674116 - 2674105 - H 73 -4.4 -4.86731 | TGCGTGGAAATAAAA TCAC CATC GTGA ATTAGCAACGCGTGC TERM 3305 2674279 - 2674269 - H 75 -2.6 -5.1848 | opp_overlap 2674269 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG yfhD 2674398 - 2675816 + | putative transglycosylase yfhC 2676349 - 2675813 - | tRNA-specific adenosine deaminase yfhB 2677009 - 2676374 - | hypothetical protein TERM 3306 2676640 - 2676625 - G 74 -6.1 -4.46112 | overlap 2676637 GCGTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 3307 2677005 - 2676983 - G 86 -6.2 -5.16572 | overlap 2676986 2676988 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT TERM 3308 2677955 - 2677923 - g 72 -7.7 -3.94877 | ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCTCAGGGAATGTTA yfhH 2677218 - 2678066 + | putative DNA-binding transcriptional regulator S2781 2678959 - 2678519 - | DNA-invertase TERM 3309 2679045 - 2679070 + H 79 -2.7 -5.40072 | gap 1, opp_overlap 2679045 2679059 2679064, overlap 2679058 2679068 TTCCATGGGAATACA CAGT-CATTATA AAA TAGAATGTACTG TTTTTTTAAAGAAAA TERM 3310 2679099 - 2679059 - H 79 -8 -4.48072 | gap 1, opp_overlap 2679045 2679058 2679068, overlap 2679045 2679064 ACAGTCATTATAAAA TAGAATGTACTGTTTTTTT AAAG AAAAAAACAGTACATTG-A GATATGATTTGGATC TERM 3311 2679095 - 2679064 - H 100 -14.8 -4.04187 | opp_overlap 2679045 2679058 2679068, overlap 2679045 2679059 CATTATAAAATAGAA TGTACTGTTTTTTT AAAG AAAAAAACAGTACA TTGAGATATGATTTG ipaH_7 2679457 - 2681283 + | invasion plasmid antigen S2783 2681829 - 2681284 - | hypothetical protein TERM 3312 2681348 - 2681325 - G 100 -13.8 -4.58395 | opp_overlap 2681324 2681321, overlap 2681326 CTGACTCCGGAAAAA CGGAGGCCCG CCCC CGGGCCTCCC CTGATTCATCCGTTT TERM 3313 2681347 - 2681326 - G 100 -17.3 -3.34716 | opp_overlap 2681324 2681321, overlap 2681325 TGACTCCGGAAAAAC GGAGGCCCG CCCC CGGGCCTCC CCTGATTCATCCGTT S2784 2683163 - 2681874 - | putative tail fiber protein TERM 3314 2682593 - 2682613 + g 74 -7.5 -4.07687 | CGTAAATGTCGCTCT GTGCTTCCA TGG TGGGCGCAC TTTTCAGCCCCAGAT TERM 3315 2683205 - 2683187 - R 73 -7.4 -4.13995 | overlap 2683190 TCGCGATAAATTAAA TCAGGAAG AAC CTTCCGGA GAGGCGGGCCATTCA S2785 2683675 - 2683187 - | putative tail fiber assembly protein S2786 2683845 - 2683735 - | putative tail fiber protein S2787 2684317 - 2684682 + | insertion sequence 2 OrfA protein S2789 2686456 - 2685470 - | putative tail fiber protein S2788 2684640 - 2685545 + | insertion element IS2 transposase InsD S2790 2687048 - 2686443 - | hypothetical protein S2791 2687517 - 2687050 - | putative bacteriophage protein S2793 2687812 - 2688114 + | IS600 orfA S2794 2688255 - 2688968 + | IS600 orfB TERM 3316 2689015 - 2689035 + T 82 -11.2 -3.64488 | overlap 2689013 CAGTACACCTCATTT TACAGCCC CGTCC GGGCTGTA TGTTTTCACCAGCTT S2795 2689665 - 2689009 - | hypothetical protein TERM 3317 2689141 - 2689198 + g 100 -13.6 -4.91977 | gap 2, opp_overlap 2689162 AACTGAATCACGCCA GGCTTTCTGCTCGTCGATAATCCGCCGG ATCT CAGGC-G-TTATCGGCAGGCGGAAAGCC TTTTGTGTTTTCATA S2796 2690108 - 2689707 - | hypothetical protein TERM 3318 2689820 - 2689839 + g 78 -5.7 -4.81249 | gap 1, opp_overlap 2689820 CCAGCTGGATAACGA GCTCCGGC CACTC GCCG-AGC TTTTTACCTTTGAGG TERM 3319 2689917 - 2689928 + g 79 -4.4 -4.93696 | GCTGAAATCGATACG GAGA TAGT TCTC TTTTTCGTATTTGGA yfhL 2690323 - 2690583 + | hypothetical protein TERM 3320 2690580 - 2690610 + T 76 -9.3 -3.71284 | opp_overlap 2690580 2690579 CCACGCGGATAAAAT TTAATATTCTACT CTGGA AGTAGAGTATTAA TTATATTACTGGGAA TERM 3321 2690757 - 2690728 - T 100 -13.6 -3.78022 | opp_overlap 2690728 TTTATAGTTATTAAA GGCGCGTCCGAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT TERM 3322 2691253 - 2691217 - T 100 -11.6 -4.83759 | opp_overlap 2691217 2691223 AATTAAAGTTAAAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3323 2691217 - 2691253 + T 95 -10.9 -4.56597 | opp_overlap 2691217, overlap 2691223 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3324 2691223 - 2691247 + T 73 -4.1 -4.77757 | opp_overlap 2691217, overlap 2691217 AGTTAAAAAGTAAAA CCCCCGTTC CTTACCA GTTCGGGGG TTTTACTTTTTAAAG acpS 2691657 - 2691277 - | 4'-phosphopantetheinyl transferase TERM 3325 2691515 - 2691533 + g 74 -8.1 -4.14392 | opp_overlap 2691515 CGCTTCGCCAGAAAA CGCACCG GCTGG TGGTGCG TTTTCCAGATTGCCC TERM 3326 2691533 - 2691515 - G 78 -7.4 -4.36914 | opp_overlap 2691515 CGCTTCGCCAGAAAA CGCACC GGCTGGT GGTGCG TTTTCCAGATTGCCC pdxJ 2692388 - 2691657 - | pyridoxal phosphate biosynthetic protein PdxJ recO 2693128 - 2692400 - | DNA repair protein RecO TERM 3327 2692551 - 2692561 + g 72 -6.8 -4.21275 | overlap 2692533 2692532 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2694045 - 2693140 - | GTP-binding protein Era TERM 3328 2693484 - 2693474 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC TERM 3329 2693953 - 2693964 + g 70 -5.8 -4.16284 | GGTGATGGAGATTTT CTGC CCCA GCAG TTTGTTCAACAATGT rnc 2694722 - 2694042 - | ribonuclease III TERM 3330 2694981 - 2694949 - R 100 -21.5 -4.07877 | TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGCTATTA lepB 2695968 - 2694994 - | lsignal peptidase I TERM 3331 2695530 - 2695546 + g 76 -9.5 -3.76373 | overlap 2695508 GTAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2697783 - 2695984 - | GTP-binding protein LepA TERM 3332 2696082 - 2696095 + g 74 -2.3 -5.07486 | overlap 2696080 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGGCTG TERM 3333 2697988 - 2697971 - R 91 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2698460 - 2697981 - | SoxR reducing system protein RseC rseB 2699413 - 2698457 - | periplasmic negative regulator of sigmaE TERM 3334 2699354 - 2699327 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 2700063 - 2699413 - | anti-RNA polymerase sigma factor SigE TERM 3335 2699789 - 2699801 + g 78 -7.7 -4.43189 | opp_overlap 2699797, overlap 2699797 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTCTGCCATTGAT rpoE 2700671 - 2700096 - | RNA polymerase sigma factor RpoE TERM 3336 2701102 - 2701080 - R 77 -3.5 -5.20222 | opp_overlap 2701101 ATTAAACAAAGAAAA TGAATACTC TCCCT GAACATTCA TGTGACGTGTTGATT TERM 3337 2701226 - 2701246 + r 76 -8.9 -3.73775 | overlap 2701229 TCAACATTTTATGCC CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACTGAC TERM 3338 2702718 - 2702705 - R 75 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA yfiC 2703543 - 2702686 - | putative enzyme TERM 3339 2702802 - 2702776 - G 88 -12.4 -3.58269 | overlap 2702800 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 3340 2703461 - 2703448 - G 77 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 3341 2703992 - 2703981 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT srmB 2703555 - 2704889 + | ATP-dependent RNA helicase SrmB TERM 3342 2704893 - 2704918 + T 100 -15.5 -5.40072 | opp_overlap 2704891 2704890 ACAGAAGAGTAATCT CAATGCCGGGT TTAA GCCCGGCATTG TTTTTTTACGCAACC yfiE 2705850 - 2704924 - | putative LYSR-type transcriptional regulator TERM 3343 2705391 - 2705374 - G 75 -6.9 -4.4009 | opp_overlap 2705373, overlap 2705377 CCCTACGCGATAAAA GACGCCG ACAT CGGCCTC ATCATTCAGTAGCGC TERM 3344 2705461 - 2705447 - G 70 -7.1 -4.05446 | GCCTGCAACGATAAA CGCAC TTTTG GTGCG CGTTGCCGAAAACGC TERM 3345 2705719 - 2705733 + g 70 -5 -4.57569 | AAAAGTCACCGTCGA TTGTGT ACA GCACAA TTTTTGCGAAGCTCG TERM 3346 2705754 - 2705734 - G 82 -11.3 -3.46602 | TTGTGTACAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC yfiK 2705908 - 2706495 + | neutral amino-acid efflux protein TERM 3347 2706472 - 2706484 + T 72 -4.8 -4.66537 | CTGTTGCTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAACGAA TERM 3348 2706528 - 2706505 - T 100 -16.8 -5.65513 | opp_overlap 2706497 2706505 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 3349 2706505 - 2706528 + T 100 -16.8 -3.22884 | opp_overlap 2706505, overlap 2706497 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC yfiD 2706934 - 2706551 - | autonomous glycyl radical cofactor GrcA TERM 3350 2707078 - 2707062 - H 77 -3.7 -5.24551 | TTAAATCAACAAAAA CCACA CATCGAT TGTGG TCGTAAATGGATTTT TERM 3351 2707701 - 2707718 + G 100 -9.1 -5.18726 | opp_overlap 2707697 2707700 AGCCTGATTAACCAG CACCGCG AAGG CGTGGTG TTTTTGTTGTGGGGA ung 2707239 - 2707928 + | uracil-DNA glycosylase TERM 3352 2707969 - 2707942 - T 90 -13.4 -3.5394 | opp_overlap 2707940 2707943 2707966 2707968, overlap 2707943 AAATTTGCGGGGAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 3353 2707943 - 2707968 + T 88 -14.7 -3.0169 | opp_overlap 2707943 2707942, overlap 2707940 2707966 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 3354 2707968 - 2707943 - T 95 -16.9 -2.72043 | opp_overlap 2707940 2707943 2707966, overlap 2707942 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT yfiF 2709013 - 2707976 - | putative methyltransferase TERM 3355 2708812 - 2708800 - G 71 -9.1 -3.53012 | opp_overlap 2708780 CCGGCGCGCGGGAAA CCGTG CGC CACGG CGAATCTTCCCACTT trxC 2709220 - 2709639 + | thioredoxin 2 TERM 3356 2709646 - 2709666 + F 100 -14.7 -4.50976 | TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 3357 2709679 - 2709689 + F 70 -2.4 -5.02476 | overlap 2709687 CCGTTTTCTCCTCTG CGAC AAT GGCG TTTTTTCGACGCTCT TERM 3358 2709741 - 2709766 + G 70 -3.9 -4.63218 | overlap 2709744 CTCCAGTTACGCGCC GAGCGTATTGC GCGC GCAACACGTCC TTTTCTTGCCCGCGG TERM 3359 2709921 - 2709905 - g 72 -10.1 -3.3782 | opp_overlap 2709904 2709902 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA yfiP 2709684 - 2710406 + | hypothetical protein TERM 3360 2710848 - 2710890 + G 70 -5.5 -4.42806 | overlap 2710833 2710844 CTGGCAAGGTCTGAA TGCCAGCTTTTCGCCTGTG CCGAT TAAACGCGGCAAGCTGGCG TTTATTTCGCAATCG TERM 3361 2712129 - 2712119 - g 77 -6.8 -4.58395 | overlap 2712120 2712121 TCGATCGCGTAAAAA TGGC CTG GCCA CAGGCGCGGGTCCAC yfiQ 2710438 - 2713098 + | hypothetical protein pssA 2713212 - 2714567 + | phosphatidylserine synthase TERM 3362 2714574 - 2714590 + F 100 -9.4 -5.04249 | opp_overlap 2714574 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 3363 2714590 - 2714574 - f 72 -9.4 -3.51032 | opp_overlap 2714574 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG yfiM 2714664 - 2714936 + | hypothetical protein kgtP 2716231 - 2714933 - | alpha-ketoglutarate transporter TERM 3364 2716486 - 2716474 - H 70 -9.1 -3.4072 | overlap 2716476 TATGTGGGAGTATAA GACGC GCA GCGTC GCATCAGGCATTTTT TERM 3365 2716521 - 2716540 + H 100 -13.6 -3.83214 | opp_overlap 2716521 GCGCCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTTCGCTTAGTTTGA TERM 3366 2716540 - 2716521 - H 100 -13.6 -4.74103 | opp_overlap 2716521 GCGCCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTTCGCTTAGTTTGA TERM 3367 2716687 - 2716708 + H 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 3368 2719176 - 2719188 + H 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3369 2719730 - 2719754 + H 71 -8 -3.93061 | gap 1, opp_overlap 2719736 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 3370 2719956 - 2719969 + H 75 -6.7 -4.41177 | overlap 2719921 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 3371 2721999 - 2721982 - H 74 -3.3 -5.04597 | overlap 2721954 2721983 2721985 ACTTATAGACAAAAA CGAGCCC CGAA GGGCTAA TGCCGATCAGTTAAG TERM 3372 2722045 - 2722076 + H 100 -13.9 -4.4017 | opp_overlap 2722048 CCAGTGGCTGTGTAA GAATCCGGAAACG CTCACT TGTTTCCGGATTC TTTTATGCACATTGG TERM 3373 2722073 - 2722048 - H 72 -9.1 -3.61398 | opp_overlap 2722045 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTCTTTTATGCACAT S2827 2722081 - 2723409 + | IS4 orf TERM 3374 2723420 - 2723391 - T 89 -9.3 -4.59109 | overlap 2723393 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCTCAAGGGCT TERM 3375 2723418 - 2723393 - T 100 -16.3 -3.90762 | overlap 2723391 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCTCAAGGG S2828 2724197 - 2723460 - | outer membrane protein assembly complex subunit YfiO TERM 3376 2724297 - 2724287 - H 74 -8.2 -3.8766 | GCACACTATATTAAA CGGC AAA GCCG TAAAACCCCAACGAT rluD 2724332 - 2725312 + | 23S rRNA pseudouridine synthase D yfiH 2725309 - 2726040 + | hypothetical protein TERM 3377 2726974 - 2726994 + G 72 -7.5 -3.86822 | opp_overlap 2726974 AACGATCTTGCCAAA CAGGAAGGC AAC GTCATCCTG TTTATCGACGAATTA clpB 2726170 - 2728743 + | protein disaggregation chaperone TERM 3378 2728769 - 2728798 + T 89 -9.3 -4.59109 | overlap 2728771 AGCCCTTCGGGGCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3379 2728771 - 2728796 + T 100 -16.3 -3.90762 | overlap 2728769 CCCTTCGGGGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S2832 2729790 - 2728780 - | IS4 orf S2833 2730107 - 2729727 - | IS4 orf TERM 3380 2730140 - 2730115 - H 100 -9.8 -5.61596 | opp_overlap 2730115 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3381 2730115 - 2730140 + H 72 -9.1 -3.61398 | opp_overlap 2730115 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 3382 2730184 - 2730208 + H 95 -2.7 -5.94214 | TGATCCTTAACTGAT CGGCATTACAG CCC TTGAGCTGCCG TTTTTTTATTCTGTT S2834 2730198 - 2730404 + | hypothetical protein TERM 3383 2730733 - 2730700 - g 72 -6.7 -4.1822 | gap 1, overlap 2730701 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG yfiA 2730439 - 2730780 + | translation inhibitor protein RaiA TERM 3384 2730806 - 2730821 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC pheL 2730884 - 2730931 + | leader peptide of chorismate mutase-P-prephenate dehydratase TERM 3385 2731000 - 2730980 - f 87 -10.3 -4.03167 | opp_overlap 2730980 GAAGACGAACAATAA GGCCTCCCA AAT CGGGGGGCC TTTTTTATTGATAAC TERM 3386 2730980 - 2731000 + F 100 -11.8 -5.5112 | opp_overlap 2730980 GAAGACGAACAATAA GGCCTCCC AAATC GGGGGGCC TTTTTTATTGATAAC pheA 2731030 - 2732190 + | bifunctional chorismate mutase/prephenate dehydratase TERM 3387 2732195 - 2732228 + T 72 -10.3 -2.83073 | opp_overlap 2732197 2732198, overlap 2732194 2732191 2732198 ATCCAACCTGATGAA AAGGTGCCGGATGAT GTGA ATCATCCGGCACTGG ATTATTACTGGCGAT TERM 3388 2732226 - 2732197 - T 100 -15.1 -4.28361 | opp_overlap 2732195 2732194 2732191 2732198, overlap 2732198 CCAACCTGATGAAAA GGTGCCGGATGAT GTGA ATCATCCGGCACT GGATTATTACTGGCG TERM 3389 2732198 - 2732225 + T 100 -18.6 -2.67428 | opp_overlap 2732198 2732197, overlap 2732195 2732194 2732191 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC TERM 3390 2732225 - 2732198 - T 100 -18.6 -3.16534 | opp_overlap 2732195 2732194 2732191 2732198, overlap 2732197 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC tyrA 2733354 - 2732233 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 3391 2732528 - 2732542 + g 71 -2.8 -4.77165 | GAGAGCGCCAGAAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGG aroF 2734435 - 2733365 - | phospho-2-dehydro-3-deoxyheptonate aldolase yfiL 2734645 - 2735010 + | hypothetical protein S2840 2735160 - 2735678 + | hypothetical protein TERM 3392 2736408 - 2736392 - f 78 -6.5 -4.64766 | overlap 2736394 TTTACAGGCCAAAAA TGCGCAG CTT CTGCGTA CCGCGCTACATGACC yfiB 2736909 - 2737391 + | putative outer membrane lipoprotein TERM 3393 2737437 - 2737416 - T 100 -11.5 -5.82281 | opp_overlap 2737416 2737434 2737436 AAACAGACAAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 2737815 - 2737468 - | 50S ribosomal protein L19 trmD 2738624 - 2737857 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2739203 - 2738655 - | 16S rRNA-processing protein rpsP 2739470 - 2739222 - | 30S ribosomal protein S16 TERM 3394 2739526 - 2739494 - R 89 -9.2 -4.63218 | gap 1, opp_overlap 2739497, overlap 2739497 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 3395 2739524 - 2739497 - R 100 -12 -4.43307 | opp_overlap 2739497, overlap 2739494 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 2740968 - 2739607 - | signal recognition particle protein TERM 3396 2741229 - 2741215 - g 85 -2.7 -5.40072 | overlap 2741217 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC S2848 2741060 - 2741926 + | hypothetical protein yfjD 2742550 - 2743233 + | putative transport protein TERM 3397 2743236 - 2743269 + T 75 -9.5 -3.61398 | opp_overlap 2743240, overlap 2743237 2743240 TGTGGCGGAGTAACG AAAACGGCCCTGCAT TCGC ATGCAGGGCCGTGAA TTATTACGAAAACAG TERM 3398 2743237 - 2743268 + T 82 -13 -2.76696 | opp_overlap 2743240, overlap 2743236 2743240 GTGGCGGAGTAACGA AAACGGCCCTGCAT TCGC ATGCAGGGCCGTGA ATTATTACGAAAACA TERM 3399 2743240 - 2743265 + T 100 -19.1 -2.6563 | opp_overlap 2743240, overlap 2743237 2743236 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA TERM 3400 2743265 - 2743240 - T 100 -19.1 -4.45544 | opp_overlap 2743237 2743236 2743240 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA grpE 2743881 - 2743288 - | heat shock protein GrpE ppnK 2744004 - 2744882 + | inorganic polyphosphate/ATP-NAD kinase recN 2744968 - 2746629 + | recombination and repair protein smpA 2746967 - 2747119 + | small membrane protein A TERM 3401 2747139 - 2747178 + T 93 -12.4 -3.70444 | gap 1, opp_overlap 2747151, overlap 2747151 AAAGTTGCTCTCAAA GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC TGTTATTTATTCGCT TERM 3402 2747167 - 2747151 - T 100 -12.3 -5.10077 | opp_overlap 2747139 2747151 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT TERM 3403 2747151 - 2747167 + T 100 -12.3 -5.46276 | opp_overlap 2747151, overlap 2747139 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT S2855 2747471 - 2747181 - | hypothetical protein TERM 3404 2747297 - 2747315 + g 74 -3 -4.96773 | overlap 2747299 CGCTTAGTTTTGCCG GACGGC TGTAAAT GCCGAC TTTGTTTTTAGTTAA TERM 3405 2747395 - 2747420 + g 74 -9.8 -3.45118 | gap 1, overlap 2747396 TCAACCGTCGCGCCC T-CCTGCAGCG TCACT CGCTGCAGGTA TTGCTTCTCAGGTAG TERM 3406 2747396 - 2747418 + g 100 -14.9 -3.29593 | overlap 2747395 CAACCGTCGCGCCCT CCTGCAGCG TCACT CGCTGCAGG TATTGCTTCTCAGGT S2856 2747898 - 2747461 - | hypothetical protein TERM 3407 2748460 - 2748448 - g 70 -5.5 -4.35524 | GGTGCAAAGTGAAAA TCGGC GTC GCCAA AGGTAAAAAACAGCA smpB 2748069 - 2748551 + | SsrA-binding protein TERM 3408 2748865 - 2748850 - f 72 -3.2 -5.08011 | overlap 2748852 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 3409 2749176 - 2749201 + F 100 -16.1 -5.31275 | opp_overlap 2749176 2749167 GATGAAGTCCTAAGA GCCCGCACGGC GCAA GCCCTGCGGGC TTTTTTGTGCTCCGA TERM 3410 2749201 - 2749176 - f 93 -16.1 -3.06737 | opp_overlap 2749176, overlap 2749167 GATGAAGTCCTAAGA GCCCGCACGGC GCAA GCCCTGCGGGC TTTTTTGTGCTCCGA TERM 3411 2750231 - 2750221 - g 72 -8.2 -3.81951 | CTGGAGATGATGAAA CCGC TAA GCGG CAACCGAGAATTTAT S2859 2749333 - 2750574 + | integrase S2860 2750774 - 2751073 + | IS1 orfA S2861 2751589 - 2751888 + | IS3 orfA TERM 3412 2752162 - 2752135 - g 75 -4.7 -4.74103 | overlap 2752136 2752137 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC S2862 2751885 - 2752313 + | IS3 orfB S2863 2752333 - 2752440 + | IS3 orfB TERM 3413 2752789 - 2752810 + F 100 -11.6 -5.03715 | opp_overlap 2752788 2752787 TGGGTAGGATCAATT TGCCCGCT TGGCAT AGCGGGCA TTTTTTCCAGGTACT TERM 3414 2753662 - 2753652 - f 74 -6.8 -4.37092 | ATGTTTTCTATAAAA CCAG GAC CTGG AAATTTACCTATCGA S2870 2755617 - 2755889 + | hypothetical protein TERM 3415 2755895 - 2755932 + F 71 -7 -4.10552 | opp_overlap 2755895, overlap 2755898 2755899 2755900 2755902 CTATTTATAATTTAA TGTTATATCTGCCCCG ATAAAA CGGGGCAGATAATATG TTTAGTTTACTAACG TERM 3416 2755898 - 2755930 + F 82 -11.5 -3.64541 | gap 1, opp_overlap 2755895, overlap 2755895 2755899 2755900 2755902 TTTATAATTTAATGT TA-TATCTGCCCCG ATAAAA CGGGGCAGATAATA TGTTTAGTTTACTAA TERM 3417 2755899 - 2755928 + F 85 -12.2 -3.39117 | opp_overlap 2755895, overlap 2755898 2755895 2755900 2755902 TTATAATTTAATGTT ATATCTGCCCCG ATAAAA CGGGGCAGATAA TATGTTTAGTTTACT TERM 3418 2755900 - 2755927 + F 90 -15.7 -2.62386 | opp_overlap 2755895, overlap 2755899 2755898 2755895 2755902 TATAATTTAATGTTA TATCTGCCCCG ATAAAA CGGGGCAGATA ATATGTTTAGTTTAC TERM 3419 2755902 - 2755925 + F 84 -13.9 -2.83953 | opp_overlap 2755895, overlap 2755900 2755899 2755898 2755895 TAATTTAATGTTATA TCTGCCCCG ATAAAA CGGGGCAGA TAATATGTTTAGTTT TERM 3420 2756801 - 2756818 + GF 72 -9.1 -3.53012 | TTCCGCCATCCACTG GCGCGTC GCCC GATGCGC TTTGCCGCGCCGCCG S2871 2756225 - 2757157 + | hypothetical protein TERM 3421 2757733 - 2757713 - gf 72 -2.6 -4.9218 | overlap 2757714 2757715 CAGTGAGCATAAAAA CGGCGTG-GT GAT ACGCAC-CCG TCAGGGCGGTGAATA TERM 3422 2757806 - 2757824 + GF 70 -5.2 -4.38927 | opp_overlap 2757805, overlap 2757807 CCGGCTGGTGAAAAT GCTCGG CCTCGAA CCGGGC TTTATTATCTGCCCG ygaF 2757111 - 2758445 + | hypothetical protein TERM 3423 2758561 - 2758539 - f 79 -10.6 -3.65046 | overlap 2758550 GCTGGACGCCAACAA TGGTGAAGTC ATC GACGTCACCA ATCCGGCGAACGGCG TERM 3424 2758973 - 2759025 + F 100 -15.6 -3.50393 | gap 2, opp_overlap 2758966 2758967 CCCGTAAAGCCGGTC CGGCG-CTGGC-GGCAGGCTGCACCA TGG TGCTGAAGCCCGCCAGTCAGACGCCG TTCTCTGCGCTGGCG TERM 3425 2760327 - 2760291 - g 70 -4.2 -4.61527 | opp_overlap 2760315, overlap 2760280 2760292 AAAACGCGGTAAAAA TCGCCCGCGCCGCCAC CAAAC GTAGCGGCACCATCGC TTTTAGCGGCGAGTA gabT 2760083 - 2761210 + | 4-aminobutyrate aminotransferase TERM 3426 2761232 - 2761244 + F 70 -9.1 -3.30124 | opp_overlap 2761207, overlap 2761231 2761241 CCCCATGCAGGAGGC GACGC TGC GCGTC TTGTCCGGCCTACGA TERM 3427 2761297 - 2761268 - f 90 -14.3 -3.25072 | opp_overlap 2761241 2761266, overlap 2761263 2761277 CCTACGAGAATCCAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC AATCTGTACGTGAAC gabP 2761448 - 2762848 + | gamma-aminobutyrate transporter TERM 3428 2763074 - 2763097 + G 70 -6.8 -4.07568 | gap 1, overlap 2763076 ATCGGGTGGCGTCTA TGTCAGAGCAG GAG CTGCTC-GATA TTTTCGACGCCCGCG ygaE 2762869 - 2763531 + | DNA-binding transcriptional regulator CsiR ygaU 2763981 - 2763532 - | hypothetical protein TERM 3429 2763559 - 2763581 + g 100 -10.6 -4.63184 | overlap 2763560 2763576 AATACGCAACACTTG CCCCGGATAA ATT TTATCCGGGC TTTTTAGCATCGGTT TERM 3430 2763560 - 2763580 + g 95 -14.1 -3.37188 | overlap 2763559 2763576 ATACGCAACACTTGC CCCGGATAA ATT TTATCCGGG CTTTTTAGCATCGGT TERM 3431 2763597 - 2763611 + g 71 -2.8 -4.77567 | overlap 2763599 TTTTTAGCATCGGTT TATTCG CTT CGAAGA TTTTATTGTACAGAT TERM 3432 2764049 - 2764030 - R 81 -12.8 -3.29649 | AGTGTAGCAGAGGAA CGCGGCGC GTTA ACGCCGCG GGGGTGAGCACAGGT S2878 2764223 - 2764065 - | hypothetical protein TERM 3433 2764274 - 2764262 - R 78 -6.3 -4.58395 | CTCATTGTTTAAAAA GAGAT TTT ATCTC TTAAGCGTAGTAATT S2879 2765229 - 2764324 - | insertion element IS2 transposase InsD S2880 2765552 - 2765187 - | insertion sequence 2 OrfA protein S2881 2765742 - 2766041 + | hypothetical protein ygaP 2766051 - 2766575 + | hypothetical protein stpA 2767026 - 2766622 - | DNA binding protein, nucleoid-associated TERM 3434 2766742 - 2766759 + g 83 -6.2 -5.00616 | overlap 2766741 AGTGAATTTATATTT CGCCGG ACGCGG CTGGCG TTTTTTACCAGCACG TERM 3435 2767330 - 2767306 - H 83 -6.5 -4.92791 | opp_overlap 2767306 2767311, overlap 2767311 TATAACAGAATAAAA GAAAACACC CCTCACT GGTGCTTTC TGCTGTTAATGTACA TERM 3436 2767325 - 2767311 - H 79 -2.8 -5.31091 | opp_overlap 2767306 2767311, overlap 2767306 CAGAATAAAAGAAAA CACC CCTCACT GGTG CTTTCTGCTGTTAAT S2884 2767694 - 2768143 + | hypothetical protein TERM 3437 2768152 - 2768178 + T 93 -12.2 -3.68619 | overlap 2768154 AGCCTGACTCTTCTT TTCGCGACTGGC ATC GCCAGTCGCGTC TTTAACTGGCTTCGC TERM 3438 2768154 - 2768176 + T 100 -19.2 -3.42283 | overlap 2768152 CCTGACTCTTCTTTT CGCGACTGGC ATC GCCAGTCGCG TCTTTAACTGGCTTC ygaC 2768524 - 2768180 - | hypothetical protein TERM 3439 2768346 - 2768356 + g 70 -5.4 -4.43681 | overlap 2768332 2768328 2768329 GGTTCAGCCAGTGTT GAAC TGC GTTC TTTTAATGTTGGATG TERM 3440 2769037 - 2769057 + H 100 -12.6 -4.89063 | opp_overlap 2769027 AATACGCGTCTTTGA CCCCGAAG CCTGT CTTCGGGG TTTCTTTTTGCCTGG nrdH 2769253 - 2769498 + | glutaredoxin-like protein nrdI 2769495 - 2769905 + | ribonucleotide reductase stimulatory protein TERM 3441 2770400 - 2770410 + G 79 -2.4 -5.17353 | CAGCAGCGCGGCGAA CTGG TTT CCTG TTTTTTGCTGCGTAT TERM 3442 2771172 - 2771198 + G 90 -14.4 -2.72263 | overlap 2771172 ATTCCCCCGATTTTT CCCGCACGGTAG AGA CTGCCGTGCGCG GTTTAACGGCGGTGT TERM 3443 2771172 - 2771199 + G 95 -14.2 -3.54129 | gap 1, overlap 2771172 ATTCCCCCGATTTTT CC-CGCACGGTAG AGA CTGCCGTGCGCGG TTTAACGGCGGTGTC nrdE 2769917 - 2772022 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 2772032 - 2772991 + | ribonucleotide-diphosphate reductase subunit beta TERM 3444 2773106 - 2773130 + F 87 -7.2 -5.14477 | CTCTGTTGCATTATT CGCCTGAA ACTACAATA TTCAGGCG TTTTTTCGCTATCTA proV 2773346 - 2774548 + | glycine betaine transporter ATP-binding subunit proW 2774541 - 2775605 + | glycine betaine transporter membrane protein TERM 3445 2775615 - 2775633 + F 85 -12.4 -3.31144 | AAGTAACTCTGCACT TGCCCGGT GAC GCCGGGCA TTATCACCCTGCCAA TERM 3446 2776484 - 2776469 - g 71 -3.2 -4.87665 | opp_overlap 2776475, overlap 2776471 CTGGACCGAGAAAAA TCCGGC GGCA GCCAAA CTGTTTGCCATTATG proX 2775663 - 2776655 + | glycine betaine transporter periplasmic subunit TERM 3447 2776665 - 2776697 + F 84 -14.2 -2.87931 | gap 1, opp_overlap 2776675 AAGTAATTTTTATTC G-GGCGGATAAGGCG TTTT CGCCTCATCCGCCGC TCTGTACACAATGCC S2894 2776847 - 2777806 + | hypothetical protein TERM 3448 2778492 - 2778478 - g 77 -7 -4.4874 | opp_overlap 2778479, overlap 2778479 TGCAAAAATCGAAAA CCGCCC TAT GGGCGT TTGGCCTGACGGATG TERM 3449 2778479 - 2778491 + G 81 -10.5 -3.60098 | opp_overlap 2778479 2778478 GCAAAAATCGAAAAC CGCCC TAT GGGCG TTTGGCCTGACGGAT TERM 3450 2778491 - 2778479 - g 76 -10.5 -3.28159 | opp_overlap 2778479, overlap 2778478 GCAAAAATCGAAAAC CGCCC TAT GGGCG TTTGGCCTGACGGAT S2896 2778150 - 2778887 + | hypothetical protein TERM 3451 2779114 - 2779124 + G 70 -6.8 -4.03234 | GTCGGCTTCGCGGTA CTGG GTG CCAG TTTCTATAAAACACG ygaH 2778877 - 2779212 + | hypothetical protein TERM 3452 2779632 - 2779619 - g 70 -6.7 -4.11484 | TCGAACGTCGTAAAA GCGAT AACG ATCGC CGCTGCCTGCATCTG emrR 2779303 - 2779833 + | transcriptional repressor MprA TERM 3453 2779881 - 2779904 + F 100 -12.5 -4.56597 | opp_overlap 2779880 2779879 2779877 2779897 AAAGAAAAAATGACC GGCCAGCAT CGCAAC ATGCTGGCC TTTTTGGCAAGCAGG TERM 3454 2780371 - 2780360 - f 80 -5.8 -5.03314 | TTGAGGTGCAAAAAA TCGC CCTC GCGA AAGCACAAAGCGACT emrB 2781149 - 2782687 + | multidrug resistant protein emrB TERM 3455 2782717 - 2782698 - T 88 -12.2 -3.50422 | opp_overlap 2782698, overlap 2782694 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT TERM 3456 2782698 - 2782717 + T 100 -12.2 -5.1848 | opp_overlap 2782694 2782698 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT ygaG 2783266 - 2782751 - | S-ribosylhomocysteinase TERM 3457 2783385 - 2783402 + r 100 -11.3 -5.58522 | CAGAGATGAAATTTT GGCCACT CCCG AGTGGCC TTTTTCTTTTCTGTC gshA 2784972 - 2783416 - | glutamate--cysteine ligase S2903 2785473 - 2785045 - | hypothetical protein yqaB 2786036 - 2785470 - | fructose-1-phosphatase csrA 2787280 - 2787095 - | carbon storage regulator alaS 2790145 - 2787515 - | alanyl-tRNA synthetase recX 2790773 - 2790273 - | recombination regulator RecX TERM 3458 2790821 - 2790804 - R 88 -8.3 -4.86862 | opp_overlap 2790803 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGCCCC AGGTTTTGCTGATAA recA 2792077 - 2791016 - | recombinase A TERM 3459 2791818 - 2791857 + g 100 -14.4 -4.08064 | gap 1, opp_overlap 2791802, overlap 2791819 GCACAGGTTTTACCT TCACGCTG-CGCTGCGG CGATCAC CTGCAGCGTCAGCGTGG TTTTACCGGAAGATT TERM 3460 2791819 - 2791856 + g 95 -15.7 -3.04517 | gap 1, opp_overlap 2791802, overlap 2791818 CACAGGTTTTACCTT CACGCTG-CGCTGCGG CGATCAC CTGCAGCGTCAGCGTG GTTTTACCGGAAGAT ygaD 2792654 - 2792157 - | competence damage-inducible protein A TERM 3461 2792799 - 2792755 - R 84 -5 -5.28778 | gap 1, opp_overlap 2792767 AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGTAAAT-AGC TACTGTACTCGCGCC mltB 2793884 - 2792799 - | murein hydrolase B TERM 3462 2794355 - 2794368 + H 81 -8.1 -4.45771 | overlap 2794363 GTTACCTACTGTTAC CGTGC ATTG GCACG TTTGTCTTTTGCAAT TERM 3463 2795066 - 2795047 - g 79 -3.6 -5.093 | overlap 2795050 CGTAAAAGAAGAAAA CATCAC TGTAGTGG GTGATG CGACACCACAACCCT srlE 2794700 - 2795659 + | PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components srlB 2795670 - 2796041 + | glucitol/sorbitol-specific PTS system component IIA srlD 2796045 - 2796824 + | sorbitol-6-phosphate dehydrogenase TERM 3464 2796856 - 2796829 - f 74 -10.7 -3.14564 | gap 1, overlap 2796849 TGATGTTCTGATCAA CAGCGGAGATCC GTTAA GGATCTCCG-TG AGACTATAGAATGCC TERM 3465 2796894 - 2796868 - f 100 -15.2 -3.57651 | CGTGAGACTATAGAA TGCCTGATGCGC TAC GCTCATCAGGCA TACAGGACTTCCGCC gutM 2796929 - 2797288 + | DNA-binding transcriptional activator GutM TERM 3466 2798049 - 2798025 - g 78 -10.8 -3.55444 | opp_overlap 2798047 TTTGCAGTCTTGAAA GCGTCGATAA GCTAA TTACCGACGC AGGTATCGATCCGGC srlR 2797355 - 2798128 + | DNA-bindng transcriptional repressor SrlR TERM 3467 2798319 - 2798332 + G 100 -3.7 -5.64274 | overlap 2798320 GCAACACTTGCCAGT ACCGG CACA CCGGC TTTTTTTGTCCATCC gutQ 2798121 - 2799086 + | D-arabinose 5-phosphate isomerase ygaA 2800597 - 2799083 - | anaerobic nitric oxide reductase transcription regulator TERM 3468 2800883 - 2800869 - g 84 -7.8 -4.68724 | overlap 2800870 GCACGGAATATAAAA CGCTGC GCG GCAGCA GCTACAACAGCTACC S2924 2800784 - 2802223 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3469 2802395 - 2802416 + G 77 -12.3 -2.72043 | overlap 2802394 2802383 AACGTGCCGACGACC TTACCCGCC AGAC GGCGGGTGA ATTTGCCGGGCAGTT TERM 3470 2802528 - 2802552 + G 72 -7.8 -3.87373 | opp_overlap 2802529, overlap 2802529 GCAATACGACAAGTT AGTGCTGGCA ACCGG TGCCAGCGCC TTTGTCCCGCCTGTG TERM 3471 2802529 - 2802551 + G 75 -11.3 -2.92102 | opp_overlap 2802529, overlap 2802528 CAATACGACAAGTTA GTGCTGGCA ACCGG TGCCAGCGC CTTTGTCCCGCCTGT TERM 3472 2802966 - 2802941 - g 90 -13.3 -3.53224 | gap 1, opp_overlap 2802957 GACTGCGCCCGGAAA CAGCCCTGGCAC GAC GCGCC-GGGCTG ACGATTAATCGCGGC ygbD 2802220 - 2803353 + | nitric oxide reductase TERM 3473 2803407 - 2803374 - T 83 -9.5 -4.08216 | opp_overlap 2803381 2803382 2803384 2803394 2803395, overlap 2803375 CTACTGTGCCTAAAA TGTCGGATGCGACGC TGGC GCGTCTTATCCGACC TACGGGGACGCATGT TERM 3474 2803406 - 2803375 - T 82 -13 -3.04715 | opp_overlap 2803381 2803382 2803384 2803394 2803395, overlap 2803374 TACTGTGCCTAAAAT GTCGGATGCGACGC TGGC GCGTCTTATCCGAC CTACGGGGACGCATG hypF 2805733 - 2803481 - | transcriptional regulatory protein TERM 3475 2804080 - 2804066 - G 90 -11.4 -3.86346 | opp_overlap 2804074 2804075 CCACTCCGGCACAAA GCGCAG GCA CTGCGC CAGCAGGTTTCGCCA TERM 3476 2805712 - 2805722 + g 77 -3.2 -5.09426 | opp_overlap 2805699 TACGCAGTTGGACAC CGCA AGA TGTG TTTTTTGCCATTGAG TERM 3477 2805898 - 2805912 + r 93 -9.2 -4.85599 | opp_overlap 2805895 2805897 TTTTTAGAACATCAG CGCCGT ACG GCGGCG TTTTTCTGCGCTCAG hydN 2806413 - 2805886 - | electron transport protein HydN TERM 3478 2806549 - 2806520 - R 91 -7.9 -5.18357 | opp_overlap 2806522 2806543, overlap 2806522 TAATGCAGGAAAAAA GATGTCATCGACA CTAG TGACGATGACATG TGATGACAATGTTTA TERM 3479 2806522 - 2806547 + r 72 -10.5 -2.79679 | opp_overlap 2806522 2806520, overlap 2806543 ATGCAGGAAAAAAGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT TERM 3480 2806547 - 2806522 - R 90 -10.5 -4.2131 | opp_overlap 2806522 2806543, overlap 2806520 ATGCAGGAAAAAAGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT ascG 2807572 - 2806562 - | ascBF operon repressor hycF 2807705 - 2807586 - | iron-sulfur protein of hydrogenase 3 (part of FHL complex) hycE 2809424 - 2807715 - | large subunit of hydrogenase 3 (part of FHL complex) hycD 2810365 - 2809442 - | membrane-spanning protein of hydrogenase 3 (part of FHL complex) hycC 2812161 - 2810368 - | formate hydrogenlyase subunit 3 hycB 2812809 - 2812198 - | small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) TERM 3481 2812660 - 2812677 + g 71 -2.7 -4.86621 | gap 1, opp_overlap 2812662, overlap 2812662 2812663 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTGAGCAT TERM 3482 2812885 - 2812847 - R 79 -8.3 -4.2558 | gap 1 CATTTTTGACGAAAA CATGCCGATGAAATGTCA TTTT CGACACT-CATCGACACG CCCATCCCCAAACAG TERM 3483 2812912 - 2812898 - R 82 -11.4 -3.57263 | opp_overlap 2812910 ACGCCCATCCCCAAA CAGGCG TAA CGCCTG CAAAACGGGCAAAGC hycA 2813395 - 2812934 - | formate hydrogenlyase regulatory protein HycA hypA 2813595 - 2813957 + | hydrogenase nickel incorporation protein TERM 3484 2814237 - 2814224 - g 75 -4.5 -4.82901 | CGTGCTGGACAAAAA CAACC GTCT GGCTG AACGCAACCGCGCGC hypB 2813961 - 2814833 + | hydrogenase nickel incorporation protein HypB TERM 3485 2814946 - 2814982 + G 77 -10.2 -3.60296 | gap 1, overlap 2814952 CGATGAAAACGGTCA GCCGCGCGTGGGCCAGT GGGT ACTGGTTCACGT-TGGC TTTGCCATGAGCGTA TERM 3486 2814952 - 2814977 + G 80 -11.9 -3.28497 | overlap 2814946 AAACGGTCAGCCGCG CGTGGGCCAGT GGGT ACTGGTTCACG TTGGCTTTGCCATGA hypC 2814824 - 2815096 + | hydrogenase isoenzymes formation protein TERM 3487 2815445 - 2815435 - g 72 -6.8 -4.18018 | CTGTTGCAGGCAAAA GCAC GCG GTGC CGATGTGCGCATCGT TERM 3488 2815709 - 2815730 + G 72 -5.9 -4.36914 | GCCACGTTAGTATGG TTATCGGCA CTGA TGCCTATAA TTTTATCGCCAGCGA hypD 2815096 - 2816217 + | hydrogenase isoenzyme HypD hypE 2816256 - 2817224 + | hypE product TERM 3489 2817264 - 2817280 + F 100 -13.7 -3.72576 | AGTCAATGACCTTTT GCACCGC TTT GCGGTGC TTTCCTGGAAGAACA TERM 3490 2817379 - 2817395 + G 72 -10.1 -3.35775 | overlap 2817378 CAGCAGCCCGATCTG GCCTCGC TGT GTGAGGC TCTTTCGCAACTGGT TERM 3491 2817466 - 2817414 - g 77 -10 -3.60792 | gap 2, opp_overlap 2817425 2817427 2817462 TTCGCAACTGGTAAA GCGTTCTGCGCTCGCCGACAACGC GGCTATT GTGTTGT-GGCAAGCGCAGA-CTC AACGTGCGTCTTATT TERM 3492 2818892 - 2818880 - g 85 -3.3 -5.44119 | overlap 2818881 GCGATCTGAAAAAAA TGGTC GCC GACCG AGAGTTCCGTAGCGA fhlA 2817298 - 2819376 + | formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons TERM 3493 2819411 - 2819384 - T 93 -12 -3.6715 | opp_overlap 2819383 2819385, overlap 2819377 2819385 2819396 TGATTTAACTGCAAA TTGCCGGACAGA TCTG CCTGTCCGGCAT ACTATTCACGAGGTT TERM 3494 2819410 - 2819385 - T 93 -15.5 -2.79968 | opp_overlap 2819383 2819385, overlap 2819377 2819384 2819396 GATTTAACTGCAAAT TGCCGGACAGA TCTG CCTGTCCGGCA TACTATTCACGAGGT TERM 3495 2819385 - 2819410 + T 86 -14.8 -2.73994 | opp_overlap 2819377 2819385 2819384 2819396, overlap 2819383 GATTTAACTGCAAAT TGCCGGACAG ATCTGC CTGTCCGGCA TACTATTCACGAGGT ygbA 2819766 - 2819413 - | hypothetical protein S2942 2820332 - 2819829 - | IS1 orfB S2943 2820526 - 2820251 - | IS1 orfA TERM 3496 2821415 - 2821403 - g 72 -10.5 -3.05463 | ATGTCGCTGATTGAA GGCCG TCG CGGCC TGCGCCGTCGCCCGC TERM 3497 2822422 - 2822405 - g 70 -4.1 -4.62069 | opp_overlap 2822407 CTGGCACTGGAAAAA CAGCTTT ATGA AGAGCTG TTCGACCTGCTGTTG TERM 3498 2823311 - 2823294 - g 72 -6.3 -4.31433 | gap 1 CAGTGCCAGAAGAAA CTTCG-CC TGC GGTCGAAG CACTGGAAAATCTCG mutS 2820830 - 2823391 + | DNA mismatch repair protein TERM 3499 2823424 - 2823398 - T 87 -11 -3.9461 | opp_overlap 2823398 CTGGTGTAATAACAA TTCCCGATAG TCTTTTG CTATCGGGAA TATTAACGACAACTG TERM 3500 2823398 - 2823424 + T 78 -11.7 -3.01924 | opp_overlap 2823398 CTGGTGTAATAACAA TTCCCGATAGT CTTTT GCTATCGGGAA TATTAACGACAACTG TERM 3501 2823491 - 2823456 - T 100 -10.6 -5.38326 | CGAATCAAATAAAAA TACCCTGTATAATAGG AAAG CTTATTTTACAGGGTA AAACCATGCCATCTA ygbI 2824997 - 2824200 - | putative DEOR-type transcriptional regulator TERM 3502 2824480 - 2824462 - G 93 -8.9 -5.0065 | GATGCAGAAATAAAA GCCTGAT CAATC ATCAGGC TGCACAGCATGGTCG TERM 3503 2825045 - 2825081 + H 73 -11.2 -2.63301 | opp_overlap 2825056, overlap 2825056 GCAACTAACGCTTAG TTCACATAAAATAACA CAAAA TGTTAATTTATGTGAA TCATCTCACCATATC S2949 2826353 - 2826655 + | IS600 orfA S2950 2826796 - 2827509 + | IS600 orfB TERM 3504 2827808 - 2827827 + T 100 -10 -5.7946 | opp_overlap 2827808 2827810 GTTTCCTTTATTTAA CAGTCCGT TCCC GCGGACTG TTTTTTTATTCAGGC S2951 2829933 - 2827837 - | putative phage transposase S2952 2830186 - 2829935 - | putative DNA-binding protein TERM 3505 2830019 - 2830030 + g 100 -4.4 -5.69793 | opp_overlap 2830019, overlap 2830008 2830012 TATAGCGTCAGAAAT TACG CGTT CGTA TTTTTTGTTTGGTGT TERM 3506 2830246 - 2830207 - H 93 -10.8 -4.4715 | CTTTAACCTACAAAA TTACCCGCGCGGATATCC GGTC GGATATCCGTATGGATAA AGATTAAGATACCAA TERM 3507 2830256 - 2830288 + H 83 -6.4 -5.0809 | gap 1, opp_overlap 2830256 2830258, overlap 2830258 GGATAAAGATTAAGA TACCAAAGATTCCCT GCAA AGGGT-TCTTTGGTG TTTTTATGGTTTATT TERM 3508 2830258 - 2830286 + H 71 -6.8 -4.13732 | gap 1, opp_overlap 2830256 2830258, overlap 2830256 ATAAAGATTAAGATA CCAAAGATTCCCT GCAA AGGGT-TCTTTGG TGTTTTTATGGTTTA S2953 2830351 - 2830914 + | putative regulatory protein yclC 2832134 - 2831184 - | putative 4-hydroxybenzoate decarboxylase padI 2832727 - 2832134 - | phenylacrylic acid decarboxylase-like protein TERM 3509 2832850 - 2832836 - H 85 -6.4 -5.14563 | overlap 2832837 TTCGTCACTAAAAAA CCGCTA TGA TAGCGA CAGAGAATTAGCCCG TERM 3510 2833112 - 2833134 + G 70 -6.9 -4.06678 | opp_overlap 2833110 2833113, overlap 2833113 TCAGACGTGAACATG ACGTCGCTG ACAAG CGGCGACGC TTTGTCTGGCTGACT S2956 2832874 - 2833281 + | putative transcriptional regulator TERM 3511 2833382 - 2833359 - T 100 -14.6 -5.67711 | opp_overlap 2833359 CAAACAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT TERM 3512 2833359 - 2833382 + T 95 -12.4 -3.87075 | opp_overlap 2833359 CAAACAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT nlpD 2835594 - 2834455 - | lipoprotein NlpD TERM 3513 2834716 - 2834697 - G 70 -7 -4.12254 | opp_overlap 2834696 TACCAGCATAAACAA CGCGGCCA TCTG CGGTCGCG ATAATTGCCTGTCCT TERM 3514 2834919 - 2834933 + g 72 -5 -4.65078 | TGGTCGCAGTTGGCT TGTTGT TCG GCAACA TTTTGTTAGCACTCT TERM 3515 2835190 - 2835213 + g 83 -5.3 -5.04385 | GTTGCCAGTAATCCA GGCGATATA GAAAAG TGTGTCGCC TTTTTTCACGGTATA TERM 3516 2835563 - 2835551 - G 86 -10.5 -3.96224 | GAAACCAGTGACAAA GCCGC AAT GCGGC GAACGGTGAATTTTG pcm 2836360 - 2835734 - | protein-L-isoaspartate O-methyltransferase TERM 3517 2835873 - 2835899 + g 70 -10.9 -2.72511 | overlap 2835872 AGAATCCCGCCTTCG TCCAGCTGCGT CATTA GCGCAGTTGGA ATTTCCGGCGGTGCC surE 2837115 - 2836354 - | stationary phase survival protein SurE truD 2838145 - 2837096 - | tRNA pseudouridine synthase D ispF 2838621 - 2838142 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2839331 - 2838621 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3518 2839296 - 2839284 - G 73 -9.1 -3.57462 | CATTCGACGGCCAAA TCCGG CCG CCGGA ACCACGGCGCAAACA ftsB 2839661 - 2839350 - | cell division protein FtsB TERM 3519 2839744 - 2839766 + r 74 -11.4 -2.82142 | opp_overlap 2839742, overlap 2839743 ATACCGCGACAACGC GGGCAAATGT ACC ACATTTGTCC ATTGTTACGTATACC ygbE 2840178 - 2839855 - | hypothetical protein cysC 2840833 - 2840228 - | adenylylsulfate kinase TERM 3520 2840779 - 2840738 - G 71 -9.5 -3.55071 | gap 1, opp_overlap 2840739 2840749, overlap 2840743 2840746 GGAGAGGCCGGTAAA CCACA-GCACTACACCACGA TGA CCGTGGTGTAGTTCGCGTTG TTGCACAGTGACCGG TERM 3521 2840739 - 2840776 + g 73 -9.2 -3.62597 | gap 1, opp_overlap 2840738 2840743 2840746, overlap 2840749 GAGAGGCCGGTAAAC CACAGCACTACACCACG ATGAC CGTGGTGTAGTTC-GCG TTGTTGCACAGTGAC TERM 3522 2840773 - 2840743 - G 93 -14.8 -3.00525 | opp_overlap 2840739 2840749, overlap 2840738 2840746 GGCCGGTAAACCACA GCACTACACCACGA TGA CCGTGGTGTAGTTC GCGTTGTTGCACAGT TERM 3523 2840770 - 2840746 - G 90 -15.1 -2.7314 | opp_overlap 2840739 2840749, overlap 2840743 2840738 CGGTAAACCACAGCA CTACACCACGA TGA CCGTGGTGTAG TTCGCGTTGTTGCAC cysN 2842260 - 2840833 - | sulfate adenylyltransferase subunit 1 TERM 3524 2841396 - 2841380 - G 72 -5.8 -4.32034 | opp_overlap 2841380 CGATCACCATCAAAA GTCACG ATCCG CGCGAC GTTTGATTCCACACC cysD 2843170 - 2842262 - | sulfate adenylyltransferase subunit 2 TERM 3525 2843322 - 2843310 - H 76 -4.8 -4.88228 | opp_overlap 2843319 AGCTAATATCAAAAA GTGC TTAAG GCAC CGGATTTCGGGCGTT iap 2843422 - 2844459 + | alkaline phosphatase isozyme conversion aminopeptidase TERM 3526 2845003 - 2844992 - T 70 -2.2 -5.0133 | GACGCGTGGAAAAAA TCGC GTTG ACGA CCCTGTCCAGTCTGC TERM 3527 2846099 - 2846129 + T 86 -9.1 -4.45083 | gap 1, opp_overlap 2846064 2846120 TACGTTCGAACGCGA GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 3528 2846285 - 2846260 - T 100 -9.7 -5.45802 | opp_overlap 2846260 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 2847040 - 2846306 - | phosphoadenosine phosphosulfate reductase cysI 2848826 - 2847114 - | sulfite reductase subunit beta TERM 3529 2847498 - 2847469 - G 95 -11.5 -4.37092 | gap 1, overlap 2847481 2847482 ATGTTGTCGATAAAA GACGGCAGGAAACG CTC CGCTTCC-GCCATC GCCAGCGGGCAAGTC cysJ 2850625 - 2848826 - | sulfite reductase subunit alpha TERM 3530 2850534 - 2850520 - G 70 -7.1 -4.0056 | overlap 2850512 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TAGGCGTTAAATCGG TERM 3531 2850852 - 2850872 + H 72 -6.2 -4.21194 | ATTAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA TERM 3532 2851284 - 2851272 - g 91 -9.1 -4.67048 | opp_overlap 2851271 2851276, overlap 2851274 TGATGGTAAAAGAAA CCTGC ACC GCAGG GTGTATCTATCGCGG ygcM 2850944 - 2851306 + | putative 6-pyruvoyl tetrahydrobiopterin synthase TERM 3533 2851432 - 2851463 + GF 91 -11.5 -4.08689 | overlap 2851433 2851460 GCCGGTATTGCAGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGA TTTATCCGTTTTGTT TERM 3534 2851433 - 2851462 + GF 93 -15 -3.03587 | overlap 2851432 2851460 CCGGTATTGCAGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG ATTTATCCGTTTTGT TERM 3535 2851460 - 2851471 + GF 77 -5.8 -4.71426 | overlap 2851433 2851432 TACGCTGCGCGCGAG CGGA TTTA TCCG TTTTGTTACTCGAAC ygcN 2851354 - 2852655 + | hypothetical protein ygcO 2852610 - 2852906 + | hypothetical protein TERM 3536 2853393 - 2853368 - T 74 -3.9 -5.08824 | opp_overlap 2853350, overlap 2853369 GGGTGACGGAAAAAA TCCGCCAAC CGCTGATT GCTGGCGGG CTGGTATGCGATGAA ygcQ 2854539 - 2853646 - | putative flavoprotein ygcR 2855282 - 2854503 - | putative transport protein ygcS 2856669 - 2855260 - | putative transport protein TERM 3537 2856649 - 2856628 - G 100 -14.5 -3.9461 | GTCCGGTAATAAGAA CGGCTTCTC GCCT GAGAAGCCG AAAAGGCAACGCCCC TERM 3538 2856683 - 2856654 - G 93 -11.4 -4.21936 | CTGAGAAGCCGAAAA GGCAACGCCCCG TCATCG CGGAACGCTGCC TGATACATTATTTTT S2981 2857485 - 2856691 - | hypothetical protein TERM 3539 2857260 - 2857276 + g 70 -10.1 -3.17392 | TCCCTTCGCCCGTCG CCTTCGC AAT GCGAGGG TTACCTTCAGCCATA S2982 2857600 - 2857875 + | IS1 orfA S2983 2857794 - 2858297 + | IS1 orfB ygcF 2859007 - 2858336 - | hypothetical protein TERM 3540 2858859 - 2858848 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 3541 2858951 - 2858938 - G 84 -3.7 -5.24551 | overlap 2858939 GTAAACGAATAAAAA TGGCG GGAA CGCCG GTAAAGTAACCCTCA S2985 2859401 - 2859676 + | IS1 orfA S2986 2859595 - 2860098 + | IS1 orfB TERM 3542 2860925 - 2860944 + T 90 -13.6 -3.33162 | opp_overlap 2860925, overlap 2860925 2860926 CTCCACCATAAAAAA TGCCAGCC CGAA GGCTGGCA TTATCAAATCAGATA TERM 3543 2860944 - 2860925 - T 100 -13.6 -5.31275 | opp_overlap 2860925 2860925 2860926 CTCCACCATAAAAAA TGCCAGCC CGAA GGCTGGCA TTATCAAATCAGATA eno 2862267 - 2860969 - | phosphopyruvate hydratase TERM 3544 2862310 - 2862338 + r 76 -11.7 -2.7458 | opp_overlap 2862312 2862315, overlap 2862309 CTGAAACTCCAGACA AACAACGCGTACC CAA GGTACGCGTTGCC GTTCTAACTTTTTTA TERM 3545 2862336 - 2862312 - R 100 -18.7 -4.07562 | opp_overlap 2862310 2862309, overlap 2862315 GAAACTCCAGACAAA CAACGCGTACC CAA GGTACGCGTTG CCGTTCTAACTTTTT TERM 3546 2862333 - 2862315 - R 100 -14.6 -4.15029 | opp_overlap 2862310 2862309, overlap 2862312 ACTCCAGACAAACAA CGCGTACC CAA GGTACGCG TTGCCGTTCTAACTT pyrG 2863992 - 2862355 - | CTP synthetase TERM 3547 2863662 - 2863683 + g 90 -11.5 -3.90744 | opp_overlap 2863651 TAACCTGCACGGTTG CGCCGAGGT AGTC ACCGCGGCG TTCTTTACGCAGAAC mazG 2865011 - 2864220 - | nucleoside triphosphate pyrophosphohydrolase TERM 3548 2864549 - 2864561 + g 74 -7.7 -4.11869 | opp_overlap 2864549 TCCAGTCGAAGCCAA CGTTG GCG CAACG TTTCTGGATTTTTTG TERM 3549 2865103 - 2865064 - R 79 -8.6 -4.2558 | opp_overlap 2865070, overlap 2865066 2865068 TACCTTCGAGTAAAA GATATCGCTGGATACGGC TGAC GCCATATCCAGCTATGTA AGACTAACTCCCGTG TERM 3550 2865101 - 2865066 - R 86 -11.2 -3.73042 | opp_overlap 2865070, overlap 2865064 2865068 CCTTCGAGTAAAAGA TATCGCTGGATACGGC TGAC GCCATATCCAGCTATG TAAGACTAACTCCCG TERM 3551 2865099 - 2865068 - R 90 -13.8 -3.44672 | opp_overlap 2865070, overlap 2865066 2865064 TTCGAGTAAAAGATA TCGCTGGATACGGC TGAC GCCATATCCAGCTA TGTAAGACTAACTCC TERM 3552 2865070 - 2865097 + r 84 -14.2 -2.88663 | opp_overlap 2865068 2865066 2865064 CGAGTAAAAGATATC GCTGGATACGGC TGAC GCCATATCCAGC TATGTAAGACTAACT relA 2867341 - 2865107 - | GDP/GTP pyrophosphokinase rumA 2868690 - 2867389 - | 23S rRNA 5-methyluridine methyltransferase TERM 3553 2869619 - 2869598 - g 70 -4.3 -4.57569 | opp_overlap 2869599, overlap 2869599 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 3554 2870724 - 2870711 - g 71 -2.3 -5.02323 | overlap 2870706 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGTA barA 2868747 - 2871503 + | hybrid sensory histidine kinase BarA TERM 3555 2871694 - 2871725 + T 95 -10.9 -4.67943 | opp_overlap 2871700, overlap 2871700 GCGTTTAGCATCAGT CTCAAACCGGCTC CAGATA GAGCCGGTTTTGG TTTTCTGTCTTAACG TERM 3556 2871700 - 2871719 + T 100 -10.7 -4.75518 | opp_overlap 2871700, overlap 2871694 AGCATCAGTCTCAAA CCGGCTC CAGATA GAGCCGG TTTTGGTTTTCTGTC TERM 3557 2871719 - 2871700 - T 82 -11.4 -3.58522 | opp_overlap 2871694 2871700 AGCATCAGTCTCAAA CCGGCTCC AGAT AGAGCCGG TTTTGGTTTTCTGTC ygcX 2873075 - 2871735 - | putative glucarate dehydratase TERM 3558 2872554 - 2872578 + g 70 -10.7 -2.83403 | opp_overlap 2872557, overlap 2872553 ATGACGCAGGCGATA CCAGTCGCATG AGT CATCCGGCTGG CTTTGATACGGCAGA ygcY 2874436 - 2873096 - | putative glucarate dehydratase TERM 3559 2873722 - 2873704 - G 70 -4.5 -4.55295 | CTTTGCATAAAGAAA TGGCTTC ATCAA GCAGCCA TGCACCGTTGGGATC TERM 3560 2874374 - 2874397 + g 79 -10.4 -3.85092 | gap 1, opp_overlap 2874368 ATTGAGCAACATGCT GTCATGTCCGG CGA CCGGA-ATGAC TTTCATATCAGTAAT S2996 2875790 - 2874438 - | putative transport protein TERM 3561 2875961 - 2875943 - R 76 -4.4 -4.93898 | overlap 2875906 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA S2997 2876673 - 2876224 - | flavodoxin yqcB 2877473 - 2876691 - | tRNA pseudouridine synthase C S2999 2877802 - 2877473 - | hypothetical protein TERM 3562 2877853 - 2877882 + r 79 -10.7 -3.51411 | opp_overlap 2877855, overlap 2877849 2877854 TAGCAGGAATAAAAA AAGGGAGCACTGT ATTC ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3563 2877854 - 2877881 + r 83 -14.2 -2.70525 | opp_overlap 2877855, overlap 2877853 2877849 AGCAGGAATAAAAAA AGGGAGCACTGT ATTC ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3564 2877880 - 2877855 - R 100 -17.7 -5.84381 | opp_overlap 2877854 2877853 2877849 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGTGCTCCC GGTTCGTTTCGCAGC syd 2878969 - 2878424 - | SecY interacting protein Syd TERM 3565 2878872 - 2878849 - G 74 -8.9 -3.9392 | opp_overlap 2878848 2878849 CGGTAGTTGAAATAA TGCACGGTG AAGGAA CACCGTACA ATTCCTCACTTAACG TERM 3566 2879739 - 2879717 - g 71 -10.6 -2.86271 | opp_overlap 2879715 2879729 2879730, overlap 2879714 2879729 CCGTCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 2879037 - 2879885 + | 7-cyano-7-deazaguanine reductase TERM 3567 2881030 - 2881013 - g 81 -6.3 -4.86731 | gap 1 GCTGGTGAAAGAAAA TCGCC-GT GAT ACAGGCGA TGCCTACAGCTTTAA ygdH 2879997 - 2881361 + | hypothetical protein TERM 3568 2881430 - 2881455 + F 100 -9.8 -5.61596 | opp_overlap 2881430 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3569 2881455 - 2881430 - f 72 -9.1 -3.61398 | opp_overlap 2881430 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT S3004 2881463 - 2882797 + | IS4 orf TERM 3570 2882805 - 2882773 - f 72 -4.8 -4.59109 | opp_overlap 2882775, overlap 2882775 2882776 CACAGCCCCGAAAAA GAGGCCAGTCAGGT TGCTT AACTGACTGGCATT ACTCCCCCGGTGACG TERM 3571 2882803 - 2882775 - f 71 -7.4 -3.90762 | opp_overlap 2882775, overlap 2882773 2882776 CAGCCCCGAAAAAGA GGCCAGTCAGGT TGCTT AACTGACTGGCA TTACTCCCCCGGTGA TERM 3572 2882802 - 2882776 - f 75 -10.9 -2.93975 | opp_overlap 2882775, overlap 2882775 2882773 AGCCCCGAAAAAGAG GCCAGTCAGGT TGCTT AACTGACTGGC ATTACTCCCCCGGTG TERM 3573 2882811 - 2882832 + F 93 -10.1 -4.72556 | overlap 2882829 GACTGGCATTACTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG TERM 3574 2882829 - 2882840 + F 71 -3.6 -4.77157 | overlap 2882811 GGTGACGTTTGTTGC CGGG TTTT CTCG TTTTTGGTCACTTAC TERM 3575 2883086 - 2883111 + F 76 -8.5 -4.06527 | gap 1, overlap 2883092 AGAAGTCAGATGTCG TTTAATGGGCAA ATA TTGCCC-TTAAA TTCTCTTTTACTTTT TERM 3576 2883092 - 2883106 + F 73 -10 -3.32941 | overlap 2883086 CAGATGTCGTTTAAT GGGCAA ATA TTGCCC TTAAATTCTCTTTTA sdaC 2883357 - 2884646 + | serine transporter TERM 3577 2884655 - 2884674 + F 81 -12.8 -3.27786 | overlap 2884667 2884669 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 3578 2885481 - 2885461 - g 72 -5.3 -4.4767 | opp_overlap 2885461 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA TERM 3579 2886047 - 2886011 - g 71 -9.4 -3.42659 | gap 1, opp_overlap 2886046, overlap 2886005 AGGTAAAGACATGAA CGCCAAG-TACCGCGAA ACCT CTCGCGGCGGCCTGGCG ATGAAGATCGTTGCC sdaB 2884704 - 2886071 + | L-serine dehydratase (deaminase), L-SD2 TERM 3580 2886081 - 2886103 + F 75 -9.8 -3.57825 | overlap 2886096 GATTAATCTCTCCCA GAGGCCTCGT TTT GCGAAGCCTC TTCCTGTTTTCTCAA TERM 3581 2886351 - 2886340 - g 75 -7.2 -4.30576 | overlap 2886342 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG xni 2886092 - 2886937 + | exonuclease IX TERM 3582 2886943 - 2886972 + T 70 -9.3 -3.32844 | overlap 2886944 GGTACGGTAACGGCG AGCCGGATACG CCGCAAAT CGTATCCGGCA TTATCACATCAGCGC TERM 3583 2886944 - 2886971 + T 78 -12.8 -2.59564 | overlap 2886943 GTACGGTAACGGCGA GCCGGATACG CCGCAAAT CGTATCCGGC ATTATCACATCAGCG fucO 2888138 - 2886990 - | L-1,2-propanediol oxidoreductase TERM 3584 2887345 - 2887329 - G 70 -5.7 -4.38712 | TGGAGTGTTATAAAA CGCGCCC AGT GGATGCG CCATACCATGCACCA fucA 2888813 - 2888166 - | L-fuculose phosphate aldolase TERM 3585 2889549 - 2889566 + G 77 -6.3 -4.62957 | gap 1 ACAAATTTCCAGGCT GGCCTGAT CCA ATC-GGCC TTTTACTTTGGTTAT fucP 2889360 - 2890676 + | L-fucose transporter TERM 3586 2890730 - 2890719 - g 93 -2.2 -5.63103 | CTGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC TERM 3587 2891435 - 2891419 - g 71 -3 -4.82901 | gap 1, overlap 2891421 CTGGGCTGATAAAAA CTTCCGC TATG GCG-AAG ATGAAAATAACAAAC fucI 2890709 - 2892484 + | L-fucose isomerase TERM 3588 2892549 - 2892576 + F 82 -12.9 -3.01791 | overlap 2892551 ACAAGCAAGAGTGGT TAGCCGGATAA ACAATG TTATCCGGCTA TATTGCAGGAGCGAT TERM 3589 2892551 - 2892574 + F 75 -11.1 -3.06696 | overlap 2892549 AAGCAAGAGTGGTTA GCCGGATAA ACAATG TTATCCGGC TATATTGCAGGAGCG fucU 2894014 - 2894436 + | protein of fucose operon TERM 3590 2894432 - 2894422 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATACCGG TERM 3591 2894449 - 2894469 + F 73 -9.6 -3.34043 | overlap 2894450 TAATCTCATACCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 3592 2894450 - 2894468 + F 81 -13.1 -2.60212 | overlap 2894449 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 3593 2894742 - 2894760 + G 72 -11.6 -2.52464 | opp_overlap 2894741 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 2894494 - 2895225 + | DNA-binding transcriptional activator FucR ygdE 2896369 - 2895269 - | putative RNA 2'-O-ribose methyltransferase ygdD 2896757 - 2896362 - | hypothetical protein TERM 3594 2896730 - 2896716 - G 74 -8.5 -3.88001 | TGCCACAAAAATGAA GCCGC TAATG GCGGC GAAAATCAGCATAAA gcvA 2897693 - 2896776 - | DNA-binding transcriptional activator GcvA TERM 3595 2897935 - 2897949 + r 100 -10 -5.17576 | opp_overlap 2897934 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 3596 2898019 - 2898000 - R 70 -10.7 -2.57423 | opp_overlap 2898000 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC TERM 3597 2898000 - 2898019 + r 100 -10.7 -5.86332 | opp_overlap 2898000 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC S3018 2898274 - 2898044 - | hypothetical protein S3019 2898463 - 2899668 + | cysteine sulfinate desulfinase ygdK 2899668 - 2900111 + | hypothetical protein TERM 3598 2900157 - 2900120 - T 100 -17.1 -3.59946 | opp_overlap 2900120 2900121 2900123, overlap 2900121 GGTTTAAGCACAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC TERM 3599 2900120 - 2900157 + T 100 -14.9 -3.92542 | opp_overlap 2900120 2900121, overlap 2900121 2900123 GGTTTAAGCACAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC TERM 3600 2900121 - 2900156 + T 100 -18.4 -2.95204 | opp_overlap 2900120 2900121, overlap 2900120 2900123 GTTTAAGCACAGAAC CGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTG ATTGTTTAACCCTGA TERM 3601 2900156 - 2900121 - T 100 -18.4 -2.75647 | opp_overlap 2900121 2900120 2900123, overlap 2900120 GTTTAAGCACAGAAC CGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTG ATTGTTTAACCCTGA TERM 3602 2900123 - 2900154 + T 100 -17.4 -3.02639 | opp_overlap 2900121 2900120, overlap 2900121 2900120 TTAAGCACAGAACCG GGTCGGATAAGACG TTCG CGTCTCATCCGACC TGATTGTTTAACCCT ygdL 2900968 - 2900162 - | putative enzyme TERM 3603 2901008 - 2900988 - R 100 -10.4 -4.93365 | CCTCAGAATTAAAAA GGGCGAGG TTATC CCTCACCC TAAACGCATAAATGC mltA 2902303 - 2901206 - | murein transglycosylase A TERM 3604 2902708 - 2902721 + r 100 -8.1 -6.02919 | opp_overlap 2902708 CAACCAATTATTGAA CACCC TAAC GGGTG TTTTTTTGTTTCTGA TERM 3605 2902765 - 2902752 - R 88 -5.9 -5.60993 | opp_overlap 2902752 TCTCCCATAAAAAAA GCGCC ATTC AGCGC CTTTTTATCATCCCC S3025 2904116 - 2902773 - | putative amidase TERM 3606 2903085 - 2903095 + g 78 -8.2 -4.25104 | opp_overlap 2903085 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTCACGCCAC TERM 3607 2905034 - 2905051 + G 79 -12.7 -2.98381 | opp_overlap 2905026, overlap 2905032 2905036 AGTGAAAGCCTGCCG CAGCGGC GTGC GCCGCTG TCATTTAATCAGTTA TERM 3608 2905550 - 2905535 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 2904258 - 2905589 + | N-acetylglutamate synthase TERM 3609 2905644 - 2905600 - T 74 -7.2 -4.30978 | gap 2, opp_overlap 2905600, overlap 2905603 GGTAAGCGATGAAAA TCACCGGATGCG--GCAGGCGT AAC ACTCGTGCGTCGCATCCGGCAA TTACGTTTATTCCCG RecD 2907477 - 2905651 - | exonuclease V subunit alpha TERM 3610 2906389 - 2906405 + g 79 -4.3 -5.00616 | opp_overlap 2906387 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 3611 2907181 - 2907159 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCGCC ACA GAGGATCATC GGCGTGGGTTCATCT RecB 2911019 - 2907477 - | exonuclease V subunit beta TERM 3612 2908638 - 2908663 + g 74 -8.3 -3.85817 | gap 1, overlap 2908639 CAGATCTTCCGCCAG ACGTTCGACCTC CGC GAGGTCG-ACGC TTTCTGGCGCAGCAT TERM 3613 2908639 - 2908662 + g 75 -11.8 -2.91276 | gap 1, overlap 2908638 AGATCTTCCGCCAGA CGTTCGACCTC CGC GAGGTCG-ACG CTTTCTGGCGCAGCA TERM 3614 2909978 - 2909990 + g 74 -6.2 -4.57569 | overlap 2909977 2909985 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 3615 2910166 - 2910145 - G 70 -5.8 -4.16016 | CGATCTTCTAAGAAA CGCTGGGA GAATTT TTCCAGCG ACTCCGGCAACTGAT TERM 3616 2910887 - 2910873 - G 71 -9.2 -3.53224 | CAGCGGGCGGGGAAA GGCGGC GGA ACCGCC TAGTCCAAGTAACAG TERM 3617 2910988 - 2910962 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptr 2913900 - 2911012 - | protease III TERM 3618 2911636 - 2911653 + g 72 -5.5 -4.58395 | CGCTGCCAGTGCGGA GTCGGTG CTGT TACCGGC TTTTTCAAAGATGAC TERM 3619 2913086 - 2913114 + g 84 -3.7 -5.28755 | overlap 2913081 2913087 2913094 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT TERM 3620 2913532 - 2913518 - G 70 -7.1 -4.128 | ACTTCCAGATAGAAA GCCGT GCGAT ACGGC GCAGTGCTGGCATTG recC 2917444 - 2914076 - | exonuclease V subunit gamma TERM 3621 2914465 - 2914453 - G 95 -9.1 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCGCC ATTACCACCGCTGGC TERM 3622 2916489 - 2916471 - G 70 -4.4 -4.45083 | opp_overlap 2916474 GTCACATCGACAAAA GCGTCCAG CTC CTGGCTGC TCTCCAGGTCAGAAA ppdC 2917807 - 2917457 - | hypothetical protein ygdB 2918199 - 2917792 - | hypothetical protein TERM 3623 2917991 - 2918021 + g 85 -8.2 -4.56597 | opp_overlap 2917995 GCGTACTGCGAGCAC TGAACTGCTGGCTG CGT CTGCCAGGAGTGCA TTTTTCCCCACGCCA ppdB 2918759 - 2918196 - | hypothetical protein TERM 3624 2919382 - 2919363 - R 100 -10.7 -5.44119 | CGGAGGGTAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT thyA 2920198 - 2919404 - | thymidylate synthase TERM 3625 2919819 - 2919836 + g 72 -4.7 -4.64598 | GCTGAAACAATAATG CGGCGCG AATC CGGGTCG TTTTTCAGCTGGTTC TERM 3626 2920071 - 2920041 - G 72 -11.1 -3.09516 | opp_overlap 2920057 TCGTGGATGATGGAA CGCAGGTGGCAAC GTTTG GTTGTCACCAGCG GGAATCCATCCTGCA lgt 2921080 - 2920205 - | prolipoprotein diacylglyceryl transferase ptsP 2923477 - 2921231 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 3627 2922783 - 2922823 + g 81 -10.6 -3.61398 | gap 2, opp_overlap 2922759 2922791 TCTTTTTGTGCTCCG GCGGCAAA-GCGTTT-GCTG TAG CGGCGAAACTCGTTTGCCGC TTCTTCCAGCGCCCC ygdP 2924020 - 2923490 - | dinucleoside polyphosphate hydrolase TERM 3628 2924662 - 2924677 + H 70 -2.5 -5.04249 | TACACTGCGAATATT CGGCA CATAAT TGCTG TTTGTTTTTTAACCA TERM 3629 2924958 - 2924943 - g 76 -7.6 -4.27316 | opp_overlap 2924941 2924943 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCGCT TERM 3630 2925322 - 2925334 + G 85 -6.9 -4.86731 | CGAACGGATTCTGAC GCTGC CAC GCGGC TTTTATTTGAAGAAG mutH 2924705 - 2925394 + | DNA mismatch repair protein S3040 2925463 - 2926176 + | putative transport protein S3041 2926314 - 2926532 + | hypothetical protein TERM 3631 2926561 - 2926537 - f 79 -8.6 -4.20918 | opp_overlap 2926536 2926535, overlap 2926540 TTGAACGTTAACAAA TAAGGTCAGC ATCCG GCTGGCCTTA AGATTTTTCTCTTTC TERM 3632 2927466 - 2927456 - g 93 -8.2 -4.82855 | opp_overlap 2927455 2927453, overlap 2927458 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATCGC S3042 2926640 - 2927680 + | putative aldo-keto reductase TERM 3633 2927711 - 2927682 - T 77 -9.3 -3.96327 | opp_overlap 2927683 2927688, overlap 2927684 2927700 ATCCTGCACCATAAA GATTAACGCCGGT TAAA ACCGGCGTTAAAT ATTAATGACGGCGCT TERM 3634 2927683 - 2927710 + T 81 -12.8 -3.13403 | opp_overlap 2927682 2927684 2927700, overlap 2927688 TCCTGCACCATAAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC TERM 3635 2927709 - 2927684 - T 100 -16.3 -3.57406 | opp_overlap 2927683 2927688, overlap 2927682 2927700 CCTGCACCATAAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 3636 2927688 - 2927705 + T 81 -12.7 -3.20348 | opp_overlap 2927684 2927682 2927700, overlap 2927683 CACCATAAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 3637 2927747 - 2927717 - T 70 -9 -3.45571 | opp_overlap 2927720, overlap 2927700 2927711 2927720 GGCGTTAAATATTAA TGACGGCGCTGC CAGATCC ACAGCGCCGTTA TTGCCAGCGCAAATA TERM 3638 2927720 - 2927744 + T 75 -10 -3.61398 | opp_overlap 2927700 2927717 2927711 2927720 GTTAAATATTAATGA CGGCGCTG CCAGATCCA CAGCGCCG TTATTGCCAGCGCAA TERM 3639 2927744 - 2927720 - T 72 -10.7 -2.8742 | opp_overlap 2927720, overlap 2927700 2927717 2927711 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG TTATTGCCAGCGCAA ygeD 2928903 - 2927713 - | hypothetical protein TERM 3640 2928243 - 2928230 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 2931055 - 2928896 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 3641 2931168 - 2931151 - H 100 -12.7 -5.75945 | opp_overlap 2931151 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3642 2931151 - 2931168 + H 81 -12.7 -3.14132 | opp_overlap 2931151 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3643 2931371 - 2931354 - H 100 -12.7 -6.07627 | opp_overlap 2931353 2931350 2931360 ACCGGCAAAAAAAAA CCTGCGC ATCT GCGCAGG CTGGTGTAATTCATG galR 2931641 - 2932672 + | DNA-binding transcriptional regulator GalR lysA 2933941 - 2932679 - | diaminopimelate decarboxylase lysR 2934063 - 2934998 + | DNA-binding transcriptional regulator LysR ygeA 2935677 - 2934985 - | putative racemase TERM 3644 2935799 - 2935773 - R 100 -18.8 -5.30155 | CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGACGCC araE 2937224 - 2935806 - | low-affinity L-arabinose transport system proton symport protein TERM 3645 2937281 - 2937263 - R 76 -4.6 -5.04385 | overlap 2937265 2937266 GACATTGTGAAAAAA TACGTGAA CAA TTCACACA GGTGTCAGGTCGGAA TERM 3646 2937516 - 2937499 - R 100 -12.7 -5.4492 | TAGAGATATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAG kduD 2938300 - 2937539 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 3647 2938143 - 2938128 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTCGATGG kduI 2939166 - 2938330 - | 5-keto-4-deoxyuronate isomerase TERM 3648 2939212 - 2939226 + r 72 -5 -4.60797 | overlap 2939209 2939213 AATAGAAAACGATAG TGAAAC ACT GTTTCG TTTTCTCTATAAAGG TERM 3649 2939272 - 2939300 + r 86 -12.1 -3.60792 | opp_overlap 2939279, overlap 2939279 GGCTAGGGTTTTCAA TTAAAAATAAAAC AAT GTTTTATTTTTAA TTTAAGGATTAAAAA TERM 3650 2939293 - 2939279 - R 78 -5.8 -4.8622 | opp_overlap 2939272 2939279 GTTTTCAATTAAAAA TAAAAC AAT GTTTTA TTTTTAATTTAAGGA TERM 3651 2939279 - 2939293 + r 80 -5.8 -4.98531 | opp_overlap 2939279, overlap 2939272 GTTTTCAATTAAAAA TAAAAC AAT GTTTTA TTTTTAATTTAAGGA yqeF 2940634 - 2939453 - | acetyl-CoA acetyltransferase TERM 3652 2940721 - 2940708 - H 84 -5.3 -5.41746 | AATTGTTTAAAAAAA GTGAT TTTT ATCAC AAAGGAAATATGCCT S3053 2941000 - 2942118 + | putative transporter protein TERM 3653 2942128 - 2942165 + F 100 -16.7 -4.8083 | gap 1, overlap 2942121 2942129 AGCTAATATCCGTTG TGG-ATGGTTCAAAATTG CTA CAATTTTGAACCATTCCA TTTTTCATAATATTC TERM 3654 2942129 - 2942163 + F 100 -18.2 -2.67364 | overlap 2942121 2942128 GCTAATATCCGTTGT GGATGGTTCAAAATTG CTA CAATTTTGAACCATTC CATTTTTCATAATAT S3055 2942753 - 2943052 + | IS3 orfA TERM 3655 2943326 - 2943299 - g 75 -4.7 -4.74103 | overlap 2943300 2943301 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC S3056 2943049 - 2943915 + | IS3 orfB TERM 3656 2944891 - 2944926 + T 79 -8.2 -4.20932 | overlap 2944921 CGGTCTGACTACCCG GCCCTTTTGGTCTGGC TCAG GTCAGGCTATGGGGGC TTTTGGCTCGCTCTT TERM 3657 2945139 - 2945111 - T 100 -11.7 -4.80453 | CTAGTACAAAATAAA GGCCAGACATCCA GTT CGGAAGTCTGACC AATAGTCGTTATTGT S3059 2946143 - 2945154 - | hypothetical protein S3060 2946718 - 2946227 - | hypothetical protein S3062 2947762 - 2947016 - | hypothetical protein S3063 2949213 - 2948881 - | hypothetical protein S3064 2950942 - 2949332 - | putative integrase S3067 2952008 - 2951229 - | putative lipoprotein TERM 3658 2951336 - 2951350 + g 76 -4.2 -5.00884 | opp_overlap 2951312 2951308 ATGCCGCATCCGTGC TCCCCA TAG TGGCGA TTTTTTGCCCAGCCT TERM 3659 2952697 - 2952677 - g 78 -8.3 -4.25658 | overlap 2952674 ACTTGACGAAAACAA GCGCGAT ACCGCCG ATCGCGC ACTGCTAACTCGCCA TERM 3660 2954000 - 2954033 + G 77 -10.3 -3.61398 | gap 1, overlap 2954002 2954003 CTCACGCCAGAGCTA TGTTGCCGCGCCTGCG CTG CGCAG-TGCGGCACTA TTATTAAAAGAGAAA TERM 3661 2954002 - 2954031 + G 76 -10.7 -3.38812 | gap 1, overlap 2954000 2954003 CACGCCAGAGCTATG TTGCCGCGCCTGCG CTG CGCAG-TGCGGCAC TATTATTAAAAGAGA TERM 3662 2954003 - 2954030 + G 84 -14.2 -2.63073 | gap 1, overlap 2954002 2954000 ACGCCAGAGCTATGT TGCCGCGCCTGCG CTG CGCAG-TGCGGCA CTATTATTAAAAGAG TERM 3663 2954091 - 2954050 - g 80 -5.2 -4.91977 | gap 1 TATTAAAAGAGAAAA TCATCGCTCAC-GCCGCAG TCATG CTACATCAGTCAGCGATGA ATTTGACCCTGATAA S3068 2952399 - 2954696 + | xanthine dehydrogenase subunit XdhA TERM 3664 2954782 - 2954760 - g 70 -9.8 -3.16564 | TGCCGATGCCATCAA CCTGCTGGCT GAC AACCCGCAGG CCAAACTGCTCGCCG ygeT 2954707 - 2955585 + | xanthine dehydrogenase subunit XdhB S3070 2955582 - 2956061 + | xanthine dehydrogenase subunit XdhC TERM 3665 2956095 - 2956064 - f 93 -10.8 -4.5528 | opp_overlap 2956069, overlap 2956065 2956069 GAAAACGAAGTAAAA GGATATCCGGCCTG AATT CAGGCCGGATTCAC TGAGGTTATGTGTTT TERM 3666 2956093 - 2956065 - f 90 -14 -3.31541 | gap 1, opp_overlap 2956069, overlap 2956064 2956069 AAAACGAAGTAAAAG GATATCCGGCCTG AATT CAGGCCGGAT-TC ACTGAGGTTATGTGT TERM 3667 2956069 - 2956090 + F 93 -15.9 -3.08471 | opp_overlap 2956065 2956064 2956069 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG TERM 3668 2956090 - 2956069 - f 100 -15.9 -3.14708 | opp_overlap 2956069, overlap 2956065 2956064 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG S3071 2956174 - 2956449 + | IS1 orfA S3072 2956368 - 2956871 + | IS1 orfB ygfU 2957303 - 2958820 + | putative permease S3074 2959070 - 2959618 + | isopentenyl-diphosphate delta-isomerase TERM 3669 2959640 - 2959623 - T 100 -10.5 -5.64421 | opp_overlap 2959623 AGCTTAAATAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAACGT lysS 2961178 - 2959661 - | lysyl-tRNA synthetase prfB 2962286 - 2961188 - | peptide chain release factor 2 TERM 3670 2962279 - 2962293 + g 74 -2.8 -4.87892 | TTTACCGGATTAATT TCAAAC ATG GTCTGA TTTCTTTTATTGAGC TERM 3671 2962329 - 2962355 + r 100 -11.7 -5.24129 | gap 1, opp_overlap 2962329 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG TERM 3672 2962355 - 2962329 - R 82 -11.7 -3.30903 | gap 1, opp_overlap 2962329 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG recJ 2964110 - 2962377 - | ssDNA exonuclease RecJ TERM 3673 2963269 - 2963279 + g 71 -3.2 -4.87665 | GCAAAACCTAAATCG CTGG CGG CTAG TTTTTGTGCATCGCG TERM 3674 2963511 - 2963499 - G 70 -4.7 -4.58395 | CTGATCGCGCAAAAA GGTGC GCA GCGCC AGCATCAGATAAAAC dsbC 2964826 - 2964116 - | thiol:disulfide interchange protein DsbC TERM 3675 2964319 - 2964329 + g 84 -4 -5.19879 | CTGCCATCACATCAT CAAA CGC TTTG TTTTTATCTTTCGCA xerD 2965747 - 2964851 - | site-specific tyrosine recombinase XerD fldB 2965859 - 2966380 + | flavodoxin FldB TERM 3676 2966387 - 2966416 + T 72 -8.5 -3.77188 | TACGCCTGATCTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TCTTTATCTTTGCGT S3081 2966827 - 2966420 - | hypothetical protein ygfY 2967074 - 2966808 - | hypothetical protein ygfZ 2967317 - 2968297 + | putative global regulator S3084 2969152 - 2968493 - | putative oxidoreductase TERM 3677 2968557 - 2968574 + g 71 -9.1 -3.50572 | opp_overlap 2968542 2968557 2968556 CCGCCGAGCACGAAG CCGTGCC AGAT GGCATGG TTGTATGGAATGCGT TERM 3678 2970225 - 2970213 - g 70 -5.5 -4.38369 | opp_overlap 2970223 CAACGAAATAAACAA CCAGC GTA ACTGG CGTGCGCCGCTGTTT bglA 2969671 - 2971104 + | 6-phospho-beta-glucosidase A TERM 3679 2971144 - 2971114 - T 74 -10.6 -3.18681 | gap 1, opp_overlap 2971108, overlap 2971117 CTTTAAGTCGATGAA GTACCGGATGCAA TACTTG TTGCATCCGGT-C AGACAACTTCCCTGT TERM 3680 2971142 - 2971117 - T 82 -13.4 -2.79023 | opp_overlap 2971108, overlap 2971114 TAAGTCGATGAAGTA CCGGATGCAA TACTTG TTGCATCCGG TCAGACAACTTCCCT ygfF 2971904 - 2971161 - | hypothetical protein TERM 3681 2972145 - 2972132 - R 100 -9.5 -4.7373 | opp_overlap 2972132 TCATCTGACTAAAAA GGCGC CGAA GCGCC TTTAGAAAATACTCG TERM 3682 2972132 - 2972145 + r 75 -9.5 -3.56092 | opp_overlap 2972132 TCATCTGACTAAAAA GGCGC CGAA GCGCC TTTAGAAAATACTCG gcvP 2975044 - 2972171 - | glycine dehydrogenase gcvH 2975552 - 2975163 - | glycine cleavage system protein H gcvT 2976670 - 2975576 - | glycine cleavage system aminomethyltransferase T TERM 3683 2977074 - 2977051 - R 93 -10.3 -4.39386 | overlap 2977045 TTCAAATGAGGAAAA TCTCCCGGC GAAAAA ACCGGGAGA TGAAAGTGTGATGGG visC 2978320 - 2977118 - | hypothetical protein TERM 3684 2977720 - 2977732 + g 73 -9.1 -3.67775 | opp_overlap 2977708 AAACCTGCCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 2979521 - 2978343 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 2980843 - 2979518 - | proline aminopeptidase P II TERM 3685 2980776 - 2980762 - G 75 -5.6 -4.72272 | opp_overlap 2980762 2980766, overlap 2980763 2980765 2980766 CTGGTGCAGCAAAAA TCAGCG CGG CGCTGC CGGGTTGCATTTGCT TERM 3686 2980775 - 2980763 - G 71 -9.1 -3.43042 | opp_overlap 2980762 2980766, overlap 2980762 2980765 2980766 TGGTGCAGCAAAAAT CAGCG CGG CGCTG CCGGGTTGCATTTGC ygfB 2981447 - 2980869 - | hypothetical protein ygfE 2981615 - 2981944 + | Z-ring-associated protein TERM 3687 2982615 - 2982638 + G 74 -3 -4.91109 | overlap 2982616 2982619 CTTTGATGAGTACGG TCAGCGCCTG GGAA TGGGCGGTGG TTTTTATGATCGGAC ygfA 2982244 - 2982792 + | putative ligase TERM 3688 2982969 - 2982988 + T 86 -11.4 -3.66178 | ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 3689 2983214 - 2983174 - T 78 -6.2 -4.7254 | gap 2, opp_overlap 2983167 2983175 2983184, overlap 2983175 2983176 AGTGGCTATCAAAAA GTTCGGTTCAGGGCGATGCA CCC CGCATCGCCCTGATT-G-AC ATCGTTGATTCTTTG TERM 3690 2983184 - 2983206 + T 86 -14.9 -2.74488 | opp_overlap 2983176 2983174 2983175, overlap 2983175 2983167 AAAAAGTTCGGTTCA GGGCGATGC ACCCC GCATCGCCC TGATTGACATCGTTG TERM 3691 2983361 - 2983380 + T 86 -11.4 -3.66178 | overlap 2983374 ACCCTTCTCCTTTAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 3692 2983525 - 2983555 + T 76 -8.2 -4.07568 | opp_overlap 2983529, overlap 2983529 TGGAGAAGGGATAAA AAAACGGGCAAGTC AGT GACCTGCCCGTTAA TTTTCAGAGAAGGGG TERM 3693 2983529 - 2983551 + T 95 -13.4 -3.66908 | opp_overlap 2983529, overlap 2983525 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA TERM 3694 2983551 - 2983529 - T 100 -15.6 -5.66684 | opp_overlap 2983529 2983525 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA serA 2984805 - 2983573 - | D-3-phosphoglycerate dehydrogenase TERM 3695 2984237 - 2984250 + g 72 -4.5 -4.70515 | overlap 2984236 2984238 TGTACCTGAGTGGCG TTGCC CAGC GGCAG TTTGTTTTCAATATC TERM 3696 2984890 - 2984872 - R 79 -3.2 -5.27399 | overlap 2984875 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCGA TERM 3697 2984887 - 2984875 - R 72 -4.9 -4.69962 | overlap 2984872 CATATCAAAAAATAA TATTG CGG CAATA TGAACGTTTGCGTCG TERM 3698 2985034 - 2985060 + r 77 -11.6 -2.91873 | opp_overlap 2985027 2985025, overlap 2985031 AATGAAGAGAATTTT TTTAACGGGGGA GGT TCCCCCGTCAGA TCATTTCACAATGGT rpiA 2985720 - 2985061 - | ribose-5-phosphate isomerase A TERM 3699 2985147 - 2985169 + g 72 -7 -4.20531 | AGCCAACAGTCACCA CGCCAGGAAT CGC ATTTATGGCG TTTTCCATCGCTATC TERM 3700 2986321 - 2986298 - g 72 -4.4 -4.70626 | overlap 2986300 GAACAAGGGCAAAAA CTGCTGGCAC TGCT GCGCCAGGTG GAGTTGCTGGAAGAA iciA 2986103 - 2986996 + | chromosome replication initiation inhibitor protein TERM 3701 2987030 - 2987010 - f 70 -9.8 -3.0082 | opp_overlap 2987010 2987009, overlap 2987009 AATCCATCAAATAAT GCCTGATA GCACA TATCAGGC GTTGTCCTCACTTCT TERM 3702 2987673 - 2987694 + G 74 -5.9 -4.57353 | gap 1, overlap 2987672 GATGACCATGAATGG CG-CAGTGCT ACC AGTACTGGCG TTTTATATCGTCGCC TERM 3703 2988070 - 2988080 + G 70 -6.8 -4.06419 | AACGTCGCCATGTTG CGTG CGG CACG TTATTTATGGAGCGA sbm 2987200 - 2989344 + | methylmalonyl-CoA mutase TERM 3704 2989675 - 2989687 + G 72 -6.9 -4.1552 | opp_overlap 2989666, overlap 2989676 GAATGACCTGGCGCG TGCCG AGG CGGCG TTTATTCGCCCGGTA ygfD 2989337 - 2990332 + | arginine/ornithine transport system ATPase ygfG 2990343 - 2991128 + | methylmalonyl-CoA decarboxylase ygfI 2993522 - 2992572 - | putative LYSR-type transcriptional regulator TERM 3705 2992631 - 2992689 + g 83 -9.89999 -4.06904 | gap 2, overlap 2992631 TCGATGCTGGGTTAA TGGT--TTGTCCCGTCACGATCTTCAGCA ATA TGCTGAAGATCGTGGCGGTATAACGATGA TTTCTGATTGAATAA TERM 3706 2992631 - 2992686 + g 100 -18.6 -3.0682 | gap 1, overlap 2992631 TCGATGCTGGGTTAA TGGTTTGTCCCGTCACGATCTTCAGCA ATA TGCTGAAGATCGTGGCGGTATAA-CGA TGATTTCTGATTGAA TERM 3707 2993415 - 2993440 + g 84 -3.9 -5.24129 | opp_overlap 2993421, overlap 2993416 CGCGGCAATGCTTTT ACCAAATGGCG AAGC CGTCATATGGA TTTTTTCTGCCGCCC TERM 3708 2993656 - 2993686 + r 79 -10.5 -3.50808 | gap 1, opp_overlap 2993645 2993655 2993654 2993658, overlap 2993654 AATATCGGGTAAAGG CAT-TAGCCCGACG AATA CGTCGGGCTACAAG TATTATTGTGCTGCA TERM 3709 2993683 - 2993658 - R 81 -13.3 -2.64472 | opp_overlap 2993656 2993654, overlap 2993645 2993655 2993654 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAGTATTATTGTGCT yggE 2994429 - 2993689 - | hypothetical protein yggA 2995157 - 2994522 - | arginine exporter protein TERM 3710 2995287 - 2995262 - R 82 -11.9 -3.31932 | opp_overlap 2995260, overlap 2995260 ATAACTAATAAGAGA GAGGCCAGAGA GTAT TATCTGGCCTC AGCGTTGATTACGCA yggB 2996156 - 2995296 - | mechanosensitive channel MscS TERM 3711 2996322 - 2996306 - R 100 -11.5 -5.40072 | TTTTGGCGAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fba 2997426 - 2996347 - | fructose-bisphosphate aldolase TERM 3712 2997606 - 2997586 - R 75 -3.1 -5.20216 | overlap 2997587 TAGAGTATGAAAAAA TGCGTGCTC TAA AAGCGCGCT GAAACAAGTGCAGGT pgk 2998804 - 2997641 - | phosphoglycerate kinase epd 2999873 - 2998854 - | erythrose 4-phosphate dehydrogenase TERM 3713 3000298 - 3000317 + H 72 -2.8 -5.02074 | gap 1, overlap 3000300 CTTTTACGCACTGCG CCTCCT-CC CCG GGCAGGAAG TTTTTTCCCAGCTAC S3113 3000407 - 3000676 + | putative DNA-binding protein S3114 3000699 - 3001277 + | putative inner membrane protein S3115 3001278 - 3001586 + | lipoprotein S3116 3001587 - 3001985 + | lipoprotein S3117 3001973 - 3002650 + | putative ATP-binding protein of ABC transport system TERM 3714 3002872 - 3002859 - g 78 -5.2 -4.7657 | opp_overlap 3002870, overlap 3002861 GAAAAACCTGAAAAA CCGC CAGCGC GCGG CAAAGGTTGGCGTAC TERM 3715 3003225 - 3003248 + G 81 -9.6 -4.11805 | opp_overlap 3003221 GGTAGCAATCAGTCA TGACGCCG CATTTACC CGGCGTCA TTTCTCTCGTGTGGT S3118 3002644 - 3003321 + | putative ATP-binding protein of ABC transport system yggD 3004512 - 3004003 - | putative DNA-binding transcriptional regulator yggF 3005499 - 3004534 - | fructose-1,6-bisphosphatase II-like protein TERM 3716 3005370 - 3005408 + g 82 -2.5 -5.35224 | overlap 3005378 3005389 GAAAAGCGACGTCGT TTAATG-CCTGGCGCATCG CGG TGAC-CGCCAGGCCATCAA TTTTATTTTTGTCGC TERM 3717 3005441 - 3005460 + g 87 -13.6 -3.05384 | overlap 3005443 CATCCGGTTTGCGGC CAGGCAGC CAAC GCTGCCTG TTCCGTAACGCGAAA S3122 3006485 - 3005496 - | putative oxidoreductase S3124 3007242 - 3006739 - | IS1 orfB S3125 3007436 - 3007161 - | IS1 orfA TERM 3718 3007734 - 3007749 + H 72 -4.8 -4.58859 | TTGTTATGTTCATCA CAAAAT CAAC ATTTTG TTTGTTATTGTATTT TERM 3719 3008146 - 3008126 - g 77 -9.7 -3.64703 | TCCCTTTTATGGAAA GCGTGGAGA AAA TTTCCACGC GTAATCAGGCTGTGG S3126 3007927 - 3008835 + | putative serine protease TERM 3720 3008841 - 3008858 + T 74 -10.5 -3.28924 | opp_overlap 3008841 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGTCC TTCTCACAAAACGTC TERM 3721 3008858 - 3008841 - T 100 -8.3 -5.65513 | opp_overlap 3008841 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGTCC TTCTCACAAAACGTC tktA 3010872 - 3008881 - | transketolase TERM 3722 3011843 - 3011816 - g 77 -10 -3.65314 | GCGAAGCTGGAAGAA GGTCGTCAAA GCTCAATG TTTGACGACC ATCCTGCATCCGCCG yggG 3011024 - 3011908 + | hypothetical protein TERM 3723 3012074 - 3012043 - T 70 -10.8 -2.52464 | opp_overlap 3012043, overlap 3012053 CGGGTGCCGAACGTA GGTCGGATAAGGCG TTCA CGCCGCATCCGACA TTAATGGCACGTTTT speB 3013034 - 3012114 - | agmatinase TERM 3724 3012667 - 3012657 - G 72 -6.8 -4.1822 | CGGCAGCGTAACAAA GTGG TCA CCAC CGAAGGAGAGCATAC TERM 3725 3012994 - 3012982 - G 77 -3.4 -5.03314 | opp_overlap 3012988 3012991, overlap 3012989 GGCAGGCGTAAAAAA CCAA AGGCA TTGG AAACCAGTGAGTTAT TERM 3726 3013102 - 3013070 - R 100 -14.9 -5.71712 | opp_overlap 3013065 3013070 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC TERM 3727 3013070 - 3013102 + r 90 -14.9 -3.27525 | opp_overlap 3013070, overlap 3013065 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC S3130 3013544 - 3013170 - | lipoprotein S3131 3014073 - 3013570 - | IS1 orfB S3132 3014267 - 3013992 - | IS1 orfA TERM 3728 3014400 - 3014361 - R 100 -10 -5.1383 | overlap 3014365 3014392 AAGAATATATAAAAA GAAAGCGGGCCGATTTAC GTAA ATAAATCGACCCGCCAGC GGAATAATCTTAATT TERM 3729 3014396 - 3014365 - R 100 -16 -5.02777 | overlap 3014361 3014392 ATATATAAAAAGAAA GCGGGCCGATTTAC GTAA ATAAATCGACCCGC CAGCGGAATAATCTT speA 3016390 - 3014414 - | arginine decarboxylase TERM 3730 3014719 - 3014709 - G 81 -6.8 -4.59342 | overlap 3014711 CCGACCATAAAGAAA CCGA GCA TCGG CGGATTCTCTGGATC yqgB 3016545 - 3016399 - | hypothetical protein TERM 3731 3016607 - 3016590 - H 81 -8.5 -4.52703 | opp_overlap 3016580 3016602, overlap 3016580 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC TERM 3732 3016846 - 3016870 + G 79 -2.2 -5.27335 | gap 1, overlap 3016850 ACCCGGCTGGAAGTG GCAACACGA AAGAAACG TCGTGT-GC TTTTTATTTAAGCCG yqgC 3016666 - 3016881 + | hypothetical protein TERM 3733 3016884 - 3016894 + T 79 -8.2 -4.36914 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA yqgD 3017129 - 3016878 - | hypothetical protein TERM 3734 3017661 - 3017649 - g 91 -9.1 -4.59853 | TGAAGTGCGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 3735 3018260 - 3018248 - g 72 -5.5 -4.57482 | opp_overlap 3018248 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGTGA TERM 3736 3018325 - 3018296 - g 74 -2.7 -5.00616 | gap 1, overlap 3018304 TCCCGTGGGAAAAAA CCGACAAAGCGCAG CTG CTGCGCGATG-CTG CCGGTCTGAAGTAAT TERM 3737 3018318 - 3018304 - g 91 -11.4 -4.11869 | overlap 3018296 GAAAAAACCGACAAA GCGCAG CTG CTGCGC GATGCTGCCGGTCTG metK 3017185 - 3018339 + | S-adenosylmethionine synthetase TERM 3738 3018362 - 3018380 + F 100 -11.7 -5.48213 | opp_overlap 3018362 TCACCTGCGTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 3739 3018380 - 3018362 - f 86 -11.7 -3.53444 | opp_overlap 3018362 TCACCTGCGTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 3740 3018695 - 3018714 + F 78 -6.5 -4.68994 | overlap 3018675 GTAAGCGATTACACT GATGTGA TTTGCT TCACATC TTTTTACGTCGTACT galP 3018815 - 3020170 + | major facilitator superfamily galactose-proton symporter TERM 3741 3020430 - 3020455 + G 75 -5.5 -4.63486 | ATCCGCCTCAATCCC GTTTTGCTGTT GGAA AACAGTGAAGC TTTTATTGAAGAAGT sprT 3020247 - 3020744 + | hypothetical protein TERM 3742 3021077 - 3021063 - g 71 -2.7 -4.77757 | overlap 3021064 GCGCAAAAATGAAAA CCGCG CCAGC CGCGT AGAGTGGGAACACAT TERM 3743 3021335 - 3021319 - g 87 -4.3 -5.28942 | opp_overlap 3021334, overlap 3021331 GATTTCAAAGAAAAA GCTGCCG AAC CACCAGC GCGTGCACGCGGTGC endA 3020839 - 3021546 + | DNA-specific endonuclease I TERM 3744 3021594 - 3021616 + F 72 -4.7 -4.71061 | opp_overlap 3021595, overlap 3021595 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT yggJ 3021626 - 3022357 + | hypothetical protein TERM 3745 3023259 - 3023279 + G 74 -11.2 -3.1552 | opp_overlap 3023257, overlap 3023257 AGATTGAAGCAGAGT TTCCGGTG TCGAT CACCGGAA TGTTAATGGATGCCA gshB 3022370 - 3023320 + | glutathione synthetase TERM 3746 3023357 - 3023397 + F 70 -2.3 -5.00616 | TCGTTGAGACTCTGA GTGACAGCGCCCTTCTTTC CAC GCATACTGGGCGCTGTTGC TTTTTTGAACCAGGA yqgE 3023429 - 3023992 + | hypothetical protein TERM 3747 3024298 - 3024310 + G 70 -4.7 -4.56597 | overlap 3024293 CTTAGCACTGTGGAA GCCCG TTC CGGTC TTTTTGAACAGGGCG TERM 3748 3024363 - 3024346 - g 76 -7.7 -4.15044 | opp_overlap 3024359 CGGGCGCTCAACAAA GGCAAAG TTGA CTCTGCC TCTGCGGTTATTATT yqgF 3023992 - 3024408 + | Holliday junction resolvase-like protein TERM 3749 3024501 - 3024534 + TF 79 -8.1 -4.30933 | opp_overlap 3024511, overlap 3024502 CTGGCAGCGGCTGTA GGTCTGATAAGACGC GTTA GCGTCGCATCAGACA TTTATTGCCTTTATA TERM 3750 3024502 - 3024533 + TF 79 -11.6 -3.17475 | opp_overlap 3024511, overlap 3024501 TGGCAGCGGCTGTAG GTCTGATAAGACGC GTTA GCGTCGCATCAGAC ATTTATTGCCTTTAT yggR 3025609 - 3024584 - | putative transport protein TERM 3751 3025631 - 3025652 + GH 83 -12.3 -3.28791 | GGGACAAAATCTCAG CGGCTGCAA CGCG TTGCGGCCG TTCTCCAGAAGAAAT TERM 3752 3025715 - 3025696 - gH 83 -5.7 -5.13722 | overlap 3025697 GTCAGTAAAACAAAA CCTGCGA GCGCCA TCGCAGA AGCCATTGATGCCGG TERM 3753 3025862 - 3025850 - gH 72 -4.7 -4.65916 | overlap 3025817 3025851 TGCAGTCTAATAAAA GCCGC CTA GTGGC AGAGCATTTCGACTG TERM 3754 3026222 - 3026209 - gH 71 -9.5 -3.14468 | TCGGACGATATGGAA GCCGC CATT GCGGC AGGTAGCACGATGGT yggS 3025582 - 3026286 + | hypothetical protein yggT 3026304 - 3026870 + | putative resistance protein TERM 3755 3027092 - 3027077 - g 70 -3.9 -4.65895 | GTGGTGATTGAAAAA GGCGA ACTTGG CCGCC ACAAACAAATTAAAA yggU 3026867 - 3027157 + | hypothetical protein TERM 3756 3027218 - 3027233 + G 78 -9 -3.96093 | AGTGCGTGAGCTGGC GTCGCT GCTT AGCGAC TTTGGTCTTGATATC TERM 3757 3027401 - 3027424 + G 77 -10.2 -3.65046 | overlap 3027393 AGATGCGCTGGGTGG CGCGCCGGGT ATTT ACTCCGCGCG TTATTCCGGTGAAGA yggV 3027165 - 3027758 + | putative deoxyribonucleotide triphosphate pyrophosphatase yggW 3027751 - 3028887 + | coproporphyrinogen III oxidase TERM 3758 3028884 - 3028921 + F 81 -8.5 -4.37658 | opp_overlap 3028873 3028888 3028891 3028895, overlap 3028873 3028887 3028888 3028891 3028895 ATTATTCCTCGCTGA GTAATCATTAATGCGCC TGCG GGCGCATTAATCACTTC TTTTATCCCCCCGTT TERM 3759 3028887 - 3028918 + F 83 -8.8 -4.30995 | opp_overlap 3028888 3028891 3028895, overlap 3028884 3028888 3028891 3028895 ATTCCTCGCTGAGTA ATCATTAATGCGCC TGCG GGCGCATTAATCAC TTCTTTTATCCCCCC TERM 3760 3028917 - 3028888 - f 81 -12.3 -3.14132 | opp_overlap 3028888 3028887 3028884 3028891 3028895, overlap 3028891 3028895 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTATCCCCC TERM 3761 3028888 - 3028917 + F 81 -12.3 -3.18115 | opp_overlap 3028888 3028891 3028895, overlap 3028887 3028884 3028891 3028895 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTATCCCCC TERM 3762 3028891 - 3028914 + F 84 -14 -2.78052 | opp_overlap 3028891 3028888 3028895, overlap 3028888 3028887 3028884 3028895 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTATCC TERM 3763 3028914 - 3028891 - f 84 -14 -2.77899 | opp_overlap 3028888 3028887 3028884 3028891 3028895, overlap 3028888 3028895 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTATCC TERM 3764 3028910 - 3028895 - f 74 -10.4 -3.29096 | opp_overlap 3028895 3028891 3028888 3028887 3028884, overlap 3028891 3028888 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT TERM 3765 3028895 - 3028910 + F 74 -10.4 -3.26842 | opp_overlap 3028891 3028888 3028895, overlap 3028891 3028888 3028887 3028884 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT S3151 3029201 - 3029554 + | hypothetical protein S3152 3029571 - 3030164 + | hypothetical protein TERM 3766 3030191 - 3030167 - f 73 -9.9 -3.38812 | opp_overlap 3030168 3030171, overlap 3030165 3030168 CGCTGCTCAATAATA TTCCGGGCCAG CCT CTGGCCCTGAT TTTCCAGGATGCTTA TERM 3767 3030168 - 3030190 + F 95 -13.4 -4.10429 | opp_overlap 3030168 3030167 3030165, overlap 3030171 GCTGCTCAATAATAT TCCGGGCCAG CCT CTGGCCCTGA TTTTCCAGGATGCTT TERM 3768 3030190 - 3030168 - f 81 -13.4 -2.63073 | opp_overlap 3030168 3030171, overlap 3030167 3030165 GCTGCTCAATAATAT TCCGGGCCAG CCT CTGGCCCTGA TTTTCCAGGATGCTT TERM 3769 3030171 - 3030187 + F 85 -13.7 -3.08508 | opp_overlap 3030168 3030167 3030165, overlap 3030168 GCTCAATAATATTCC GGGCCAG CCT CTGGCCC TGATTTTCCAGGATG S3153 3030209 - 3030712 + | hypothetical protein S3154 3031419 - 3031144 - | IS1 orfA TERM 3770 3031828 - 3031842 + G 77 -11.4 -3.14564 | CTGGTTCAGCCGTTG CGGCAG CTG CTGCCG TTGGTGGCACACTGA TERM 3771 3032115 - 3032101 - g 74 -8.6 -3.85817 | ACCCGCTTTCAGAAA GAGCAA CCT TTGCTC AGGCCTGTAAAGCGT S3155 3031476 - 3032777 + | hypothetical protein TERM 3772 3032821 - 3032782 - T 75 -3 -5.15969 | gap 1, overlap 3032785 GGCTAATGTAAAAAA TA-ATTTGCCGGATAACTT TTT ATATTATCCGGCAAAGGCA CTTAACATGAGTTAC TERM 3773 3032817 - 3032785 - T 100 -12.9 -4.67173 | overlap 3032782 TAATGTAAAAAATAA TTTGCCGGATAACTT TTT ATATTATCCGGCAAA GGCACTTAACATGAG yggM 3033840 - 3032878 - | putative alpha helix chain TERM 3774 3033718 - 3033730 + g 71 -3.3 -4.76892 | opp_overlap 3033718 ATCAAGCTTGAGAAT GCCGT GAT ACTGC TTTTTGAATTGATCT TERM 3775 3033949 - 3033929 - R 100 -14.7 -4.74103 | opp_overlap 3033930 GTCTGAAGTGAAAAA GCCCCGGCA CGA TGCCGGGAC GAGGTGATTAGTACT ansB 3035003 - 3033957 - | L-asparaginase II TERM 3776 3034702 - 3034720 + g 85 -3.1 -5.41143 | ACGAAGCCGTCGGTT TTATCGC AGTCG GCGTTAA TTTTTTTCGCCAGTG TERM 3777 3035163 - 3035141 - R 79 -9.2 -4.12315 | opp_overlap 3035141 AAACGAAGAATTAAA CGGCATAAAA AAG TATTATGCCG TCTTAAAATAGAGGA yggN 3035895 - 3035179 - | hypothetical protein TERM 3778 3035256 - 3035275 + g 77 -6.4 -4.63184 | opp_overlap 3035255 CATCTTTGCCAAACT GCTGGAAA TCTT TTTCCTGC TTTTTCCACTCGGTT TERM 3779 3035827 - 3035805 - G 73 -12 -2.82623 | overlap 3035802 3035807 GCGGGCTGACAATCA CATCGTCACG CGG CGTGACGCTG CACTGGTAGTCGGCG TERM 3780 3035869 - 3035885 + g 74 -8 -4.12188 | opp_overlap 3035869 3035868 TGCCGTCACTGAAAG TGCTGC CGCCA GCAGCA TTTTGCGCATCATAG TERM 3781 3035942 - 3035919 - R 86 -8.8 -4.44667 | overlap 3035922 TCCCTCAAGAACAAA TCAGGCCAGC ATAT GCTGGCCCCA GATTGATAACAAAGT TERM 3782 3035939 - 3035922 - R 81 -12.7 -3.19055 | overlap 3035919 CTCAAGAACAAATCA GGCCAGC ATAT GCTGGCC CCAGATTGATAACAA yggL 3036408 - 3036082 - | hypothetical protein trmB 3037127 - 3036408 - | tRNA (guanine-N(7))-methyltransferase TERM 3783 3038131 - 3038116 - g 72 -10.4 -3.28924 | CATTGGCTGGCACAA CGGCAG ATTG CTGCCG ATAACCTGACGCAAC mutY 3037288 - 3038340 + | adenine DNA glycosylase TERM 3784 3038550 - 3038530 - g 73 -4 -4.78981 | overlap 3038544 ATTAATGAAAAGAAA CTCAACAT GATGA ATGCCGAG CACCGCAAGCTGCTG yggX 3038368 - 3038643 + | hypothetical protein TERM 3785 3038674 - 3038647 - f 93 -6.3 -5.8096 | gap 1, opp_overlap 3038649, overlap 3038649 3038650 GATAAAAAATAAAAA CAG-TGCCGGAG CACGC CTCCGGCAGCTT GCATAAAAACAAACA TERM 3786 3038671 - 3038649 - f 86 -9.1 -4.48934 | opp_overlap 3038649, overlap 3038647 3038650 TAAAAAATAAAAACA GTGCCGGAG CACGC CTCCGGCAG CTTGCATAAAAACAA TERM 3787 3038670 - 3038650 - f 81 -12.6 -3.257 | opp_overlap 3038649, overlap 3038649 3038647 AAAAAATAAAAACAG TGCCGGAG CACGC CTCCGGCA GCTTGCATAAAAACA mltC 3038705 - 3039787 + | murein transglycosylase C TERM 3788 3039821 - 3039798 - f 70 -10.3 -2.51471 | overlap 3039797 GATAATTCCATTAAC CGCCCCTGA CGATGC TCAGGGGCA AAAATGTTATCCACA nupG 3039941 - 3041245 + | permease protein for nucleosides TERM 3789 3041250 - 3041293 + T 90 -14 -3.34013 | opp_overlap 3041261, overlap 3041261 TTAGCCACTAATTAC GCAAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTATTC TTACTTCAACACATA TERM 3790 3041282 - 3041261 - T 100 -11.5 -5.30616 | opp_overlap 3041250 3041261 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC TERM 3791 3041261 - 3041282 + T 100 -13.7 -5.95946 | opp_overlap 3041261, overlap 3041250 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC speC 3043489 - 3041294 - | ornithine decarboxylase TERM 3792 3041603 - 3041614 + g 76 -3.6 -4.92363 | CGGGAAACTCTGCTG GCGG AACA TCGC TTTTTGTAGGTCTTT TERM 3793 3042334 - 3042321 - G 72 -5.2 -4.57569 | overlap 3042290 TTATGCGGGCAAAAA CGCG CCTGTC CGCG GATATGGTTATCTTT TERM 3794 3042335 - 3042346 + g 82 -3 -5.29782 | ACGCGCCTGTCCGCG GATA TGGT TATC TTTTTTATGGATCTG TERM 3795 3043022 - 3043037 + g 77 -6.8 -4.56597 | opp_overlap 3043022 GAAATCGTAAAAATG GCGTCC GGCA GGATGC TTTTTAAAGAACGCA TERM 3796 3043271 - 3043250 - G 90 -7.3 -5.0916 | overlap 3043267 TTCGGAATACAAAAA CACCGGT AGATGAAA ACCGGTG CGCTTAAGCAACGCA TERM 3797 3043533 - 3043563 + H 73 -9.9 -3.41602 | opp_overlap 3043532 3043535 3043542 CCGACCGCCAGACAT CAGTAAAAGCAGA AACGC TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 3798 3043638 - 3043623 - H 71 -7.6 -3.92005 | ACATAGAAAGGGAAA CGTTTC GCGC GAAACG GCGATAAGCGAGAGA yqgA 3043827 - 3044534 + | putative transport protein TERM 3799 3044682 - 3044666 - f 73 -10.9 -2.62616 | opp_overlap 3044665 3044664 3044661 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 3800 3044728 - 3044747 + F 100 -13.6 -4.98531 | opp_overlap 3044728 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 3801 3044747 - 3044728 - f 90 -13.6 -3.31196 | opp_overlap 3044728 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 3802 3045127 - 3045114 - g 70 -5.2 -4.386 | GAAGCTCGTACAAAA CGGG ATGAGG CCCG AAAACTGATTTCAGA S4822 3044913 - 3046175 + | putative P4-type integrase TERM 3803 3046169 - 3046217 + F 100 -9.1 -5.38958 | gap 2, opp_overlap 3046173 3046175 3046179, overlap 3046172 3046179 GATTAACAATCCATT AAAATAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTAATTA TTTTTCTTTGTAAAT TERM 3804 3046172 - 3046214 + F 100 -10.8 -4.76311 | gap 2, opp_overlap 3046173 3046175 3046179, overlap 3046169 3046179 TAACAATCCATTAAA ATAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTAA TTATTTTTCTTTGTA TERM 3805 3046213 - 3046173 - f 100 -14.3 -4.32651 | gap 2, opp_overlap 3046172 3046169 3046179, overlap 3046175 3046179 AACAATCCATTAAAA TAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTA ATTATTTTTCTTTGT TERM 3806 3046209 - 3046175 - f 100 -14.3 -3.75571 | opp_overlap 3046172 3046169 3046179, overlap 3046173 3046179 CAATCCATTAAAATA GTAAGCAGTCCGGGC AATCA GCCCGGACTGCTTTA ACTAATTATTTTTCT TERM 3807 3046205 - 3046179 - f 100 -19.5 -3.55966 | opp_overlap 3046172 3046169 3046179, overlap 3046175 3046173 CCATTAAAATAGTAA GCAGTCCGGGC AATCA GCCCGGACTGC TTTAACTAATTATTT TERM 3808 3046179 - 3046205 + F 100 -19.5 -3.74658 | opp_overlap 3046179 3046175 3046173, overlap 3046172 3046169 CCATTAAAATAGTAA GCAGTCCGGGC AATCA GCCCGGACTGC TTTAACTAATTATTT TERM 3809 3048084 - 3048065 - g 85 -2.9 -5.34365 | gap 1, overlap 3048066 3048067 3048069 GGACAAGAACAAAAA GTCACTCT ACTGA AGAGTG-C TAAAACGGAATGGAA S3169 3046628 - 3050143 + | superfamily I DNA helicase TERM 3810 3051796 - 3051758 - g 79 -9.7 -3.85698 | gap 1 CGTGCTGGTCAGAAA TTATGACAGCAG-CGCCT TCAA AGGCGACCGCTACCACAA CACGAAAAATGGCAT TERM 3811 3051831 - 3051806 - g 83 -6.1 -4.90906 | CCACAACACGAAAAA TGGCATCAACG CCGA CATCGGTGCCA GTACGGACCTGGATG S4823 3051492 - 3052253 + | hypothetical protein TERM 3812 3052311 - 3052331 + F 78 -11.9 -3.05463 | opp_overlap 3052311 TTTCCATCATCAAAA GTCTGTCGG ACA TCGACAGAC TTAACTCCCCCGGAT TERM 3813 3052331 - 3052311 - f 91 -11.2 -4.30576 | opp_overlap 3052311 TTTCCATCATCAAAA GTCTGTCG GACAT CGACAGAC TTAACTCCCCCGGAT TERM 3814 3052401 - 3052387 - f 80 -7.2 -4.57581 | overlap 3052389 3052394 ACCGGAAACAACAAA GATCAA ATT TTGATC GCAAAATTCAAAATA TERM 3815 3053286 - 3053304 + G 78 -5.3 -4.80882 | CAAAACTATAATCCC GACTTGT TAAGC GCAAGTC TTTTTAATCTGGACT sigA 3052614 - 3056471 + | serine protease TERM 3816 3056481 - 3056498 + F 100 -14.1 -3.78934 | opp_overlap 3056475 3056477 3056478, overlap 3056478 TTCTGATAACAGCCC GGGCCGC GTTT GCGGCCC TTCTTCTACCGGAGA TERM 3817 3057151 - 3057178 + F 100 -18.6 -3.06133 | opp_overlap 3057144 3057141 AAATATCATTCATCA TGACCGGCGTTT GTAT AAACGCCGGTCA TTCGCTAACAGCTTC S3177 3059545 - 3059763 + | hypothetical protein TERM 3818 3059882 - 3059901 + T 72 -9.2 -3.53444 | opp_overlap 3059883, overlap 3059883 AAGAGTCTCTGAGAA AGGCTGCC TTCC GGCAGCCC TTTACCCCCACATCA TERM 3819 3059883 - 3059900 + T 78 -12.7 -2.71924 | opp_overlap 3059883, overlap 3059882 AGAGTCTCTGAGAAA GGCTGCC TTCC GGCAGCC CTTTACCCCCACATC TERM 3820 3059900 - 3059883 - T 95 -12.7 -3.86524 | opp_overlap 3059882 3059883 AGAGTCTCTGAGAAA GGCTGCC TTCC GGCAGCC CTTTACCCCCACATC pic 3063126 - 3059914 - | serine protease precurser TERM 3821 3064089 - 3064075 - R 73 -4.3 -4.75518 | overlap 3064086 3064087 GATATAAAAGTAAAA TAGCT GAAGA AGCTA ATGATAACCCGACGT TERM 3822 3064433 - 3064448 + r 74 -5.4 -4.67123 | AGTCACCAGTACTCC CTGTTG ATGC CAGCAG TTTTGCTTCTTTTAG S3180 3065593 - 3064760 - | reverse transcriptase-like protein S3181 3066267 - 3065587 - | reverse transcriptase-like protein TERM 3823 3066130 - 3066145 + g 72 -8.2 -3.72893 | CACGCCATCAACGCC GGGGGT ATGG GCCCCC TTTGATGAAAGCGTG TERM 3824 3067033 - 3067045 + r 72 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA S3184 3067679 - 3067353 - | IS629 orfA S3185 3068387 - 3067962 - | hypothetical protein S3186 3068767 - 3068384 - | hypothetical protein TERM 3825 3069046 - 3069026 - R 71 -10.5 -2.74144 | overlap 3069025 GTGTCATGGTTAAAT CTCCGTATG GTT CATACGGAA TGACCACGCCGTAAA S3187 3069739 - 3069140 - | hypothetical protein S3188 3070456 - 3070821 + | insertion sequence 2 OrfA protein S3189 3070779 - 3071684 + | insertion element IS2 transposase InsD TERM 3826 3072060 - 3072075 + F 88 -3.4 -5.67063 | opp_overlap 3072060 TTCTGTAAATAATAC TAATTA ACCT TAATTA TTTTTTTATGGTACA TERM 3827 3072300 - 3072284 - f 73 -2.4 -5.19261 | AAATTCATTAAAAAA TTAATT GCATG AATTAA CAGGTTTTTTTTATG TERM 3828 3073396 - 3073377 - f 70 -5 -4.431 | opp_overlap 3073394 GATTCACTGACAAAA CAGACAAC CTGT ATTGCCTG TACACAACAGTTTCT S3190 3073538 - 3073744 + | hypothetical protein TERM 3829 3073859 - 3073847 - g 76 -7.7 -4.24123 | GCAACAACTTGAAAA CAGGT GTG ACCTG CTGCTCATCCAGCAT TERM 3830 3074195 - 3074180 - g 71 -9 -3.5394 | AAACCGGCTGGCAAA CAGGCT GAAC AGCCTG CTCCGGCGTTTCGAC S3191 3073830 - 3074402 + | hypothetical protein S4825 3074688 - 3074404 - | hypothetical protein TERM 3831 3076673 - 3076655 - g 87 -4.5 -5.31519 | overlap 3076657 AGACTGAAACAAAAA CAGGATG AAAAA CATCCAG TACATAACCCAGTGA S4826 3075971 - 3076990 + | hypothetical protein TERM 3832 3077045 - 3077070 + F 100 -12.6 -5.06052 | gap 1 TTATCTCCGTGAATC CCCCGC-CACC TTTCC GGTGCGCGGGG TTTTGTCTTTTTTCA sap 3077100 - 3077972 + | hypothetical protein TERM 3833 3078101 - 3078077 - f 83 -6.5 -4.92791 | opp_overlap 3078077 3078096 GATAATAGAATAAAA CGATCGATA CCTATTT TACCGATCG TTAATATCGATCGTT TERM 3834 3078241 - 3078268 + F 100 -20 -5.45652 | TGTAACCCTTTACCT GCCGGTATCCAC ATCT GTGGATACCGGC TTTTTTATTCACCCT S3194 3078306 - 3079199 + | outer membrane fluffing protein TERM 3835 3080900 - 3080933 + G 74 -10.9 -3.1355 | CCGCGTCCGGGGCTG GGGCTGGCTGGGTTC GCTG GAAACCGGTCTGCCC TTCAGTATCACTGAC S3195 3079305 - 3081425 + | outer membrane fluffing protein TERM 3836 3081432 - 3081488 + F 79 -10.2 -3.65199 | overlap 3081433 ACCTTCTGATAATTC TGCATTGCCTC-TCTGTGGTCCCGGTCA TGA TGACCGGGACC-CGGACGGGGGAAAACG TTTCAGTGCCACATT TERM 3837 3081433 - 3081487 + F 74 -11.5 -2.78798 | overlap 3081432 CCTTCTGATAATTCT GCATTGCCTC-TCTGTGGTCCCGGTCA TGA TGACCGGGACC-CGGACGGGGGAAAAC GTTTCAGTGCCACAT TERM 3838 3081642 - 3081622 - g 85 -13.3 -3.24747 | opp_overlap 3081621 3081622 TGTTCAGAGCATTAA CCAGCACAG CGT CTGCGCTGG CAGGGTTCATATTGC S3196 3081546 - 3084062 + | hypothetical protein S3197 3084138 - 3084593 + | hypothetical protein TERM 3839 3084617 - 3084647 + F 95 -12.6 -3.85698 | overlap 3084619 GTCAGTTTCATGCTT CAGCCTCTGCCACA ACG TATGGCAGAGGCTA TTTATCAGGAGAAAC TERM 3840 3084619 - 3084645 + F 100 -15.2 -3.51934 | overlap 3084617 CAGTTTCATGCTTCA GCCTCTGCCACA ACG TATGGCAGAGGC TATTTATCAGGAGAA TERM 3841 3084927 - 3084952 + F 100 -16.9 -5.46129 | GATTTCATCCATCAG GCCGCGTCTTC TCCG GGAGACGCGGC TTTTTTCATTTGTTG TERM 3842 3085176 - 3085192 + G 70 -3.5 -4.62069 | overlap 3085174 3085181 TGGAAAGTCTGCAGC GGGAAGG CTT CCAGCCC TTTTTCGCCTGCCAG S3199 3085004 - 3085822 + | hypothetical protein TERM 3843 3085866 - 3085895 + F 100 -16.5 -3.34455 | gap 1, opp_overlap 3085864 3085861, overlap 3085861 GGCACCAGAATCACC CGACGCCCCGG-AG GCG CTGCCGGGGTGTCG TTCCATTTCTGATGA TERM 3844 3085975 - 3085958 - f 74 -8.5 -3.85817 | ACCGTCCCGGAGAAA TCAGTCT GTGC AGACTGA GTATACAGGCAATGG S3200 3086164 - 3086637 + | hypothetical protein TERM 3845 3087048 - 3087097 + G 75 -5.7 -4.61566 | gap 1, overlap 3087033 3087037 GGTACAGGCACTGGC CCTGGTTGATATCCGGGTACCGGA CCA TCTGATAGTCGG-TGGCAGCCAGG TTTTCTCCTTTGCGG yeeS 3086638 - 3087129 + | RADC family DNA repair protein yeeT 3087216 - 3087437 + | hypothetical protein yeeU 3087517 - 3087894 + | putative structural protein yeeV 3087941 - 3088318 + | hypothetical protein yeeW 3088315 - 3088803 + | hypothetical protein TERM 3846 3089034 - 3089014 - f 93 -11.9 -3.65812 | opp_overlap 3089013 3089012 GTTTCTGCAACAGAA CCGGTGAGT CTT ACTCACCAG ACTTCATTCCACTGA TERM 3847 3089050 - 3089072 + F 100 -12 -4.65153 | overlap 3089044 ACTTCATTCCACTGA CGCCAGCC TGAATAC GGCTGGCG TTTTCGTTTATCTGC S3207 3089105 - 3089947 + | hypothetical protein TERM 3848 3090093 - 3090108 + F 100 -10.4 -5.42514 | opp_overlap 3090093 CACTATTTAGAAGAA CCAGCC TACG GGCTGG TTTTTTGCTTTCTGG TERM 3849 3090108 - 3090093 - f 83 -10.4 -3.82824 | opp_overlap 3090093 CACTATTTAGAAGAA CCAGCC TACG GGCTGG TTTTTTGCTTTCTGG TERM 3850 3090217 - 3090229 + F 72 -5.5 -4.53705 | AAGTAGCCCCCTTCT GGTCA CTG TGGCC TTTTCTGTCAAACTT S3209 3091372 - 3091671 + | IS3 orfA TERM 3851 3091945 - 3091918 - g 75 -4.7 -4.74103 | overlap 3091919 3091920 CCTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG ACTGAGGGCAAAGGC S3210 3091668 - 3092534 + | IS3 orfB S3211 3093410 - 3093171 - | hypothetical protein S3212 3094150 - 3093545 - | hypothetical protein S3213 3094768 - 3094265 - | IS1 orfB S3214 3094962 - 3094687 - | IS1 orfA TERM 3852 3096329 - 3096355 + r 77 -7.3 -4.39696 | opp_overlap 3096329 ACAGACAAATGGAAA GCCGGGTGA TATTTACCT TCATCCGGC TTTATTGATTTACGA yghK 3097951 - 3096365 - | putative permease TERM 3853 3096698 - 3096686 - G 71 -3.3 -4.86033 | overlap 3096697 AAACGGTGAGAAAAA CGGGA ACA TCACG CCTGTACCTGCCAGT TERM 3854 3096902 - 3096889 - G 81 -4.5 -5.06414 | overlap 3096875 3096892 TCGCCGCAATAAAAA TAGCG GTGC CGCCA GCCGAGAGAGGGTCG TERM 3855 3097208 - 3097220 + g 72 -5.5 -4.56597 | TTGCCCCATGCTGAT TGCCG TTT CGGTA TTTTTCGGCCGCCAG TERM 3856 3098292 - 3098267 - R 79 -12.6 -2.83164 | opp_overlap 3098267 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT TERM 3857 3098267 - 3098292 + r 100 -10.4 -5.04987 | opp_overlap 3098267 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT glcB 3100477 - 3098306 - | malate synthase G glcG 3100903 - 3100499 - | hypothetical protein TERM 3858 3100705 - 3100720 + g 72 -7.5 -3.96327 | TTTCACGACGCCCCA GCGCG GCGGTA CGCGC TTTCTCCTGGGAGAT TERM 3859 3102857 - 3102835 - H 72 -5.4 -4.46212 | overlap 3102836 3102837 3102847 GTGCCGAGGACAAAA TCGCGGACCG AAC CGCTCCACGG GCGACGCGGCCCCGC glcC 3104940 - 3105710 + | DNA-binding transcriptional regulator GlcC TERM 3860 3106388 - 3106399 + F 83 -4.4 -5.40072 | CACCTTTTTGCGCAC CTGA TCCA TCAG TTTTTTTAGCGCCGG TERM 3861 3106809 - 3106820 + F 74 -5.8 -4.56597 | TGCCAGATGATATGG TCCG TCCC CGGA TTTTTCGCAGACAAA TERM 3862 3107579 - 3107556 - g 77 -3 -5.09426 | gap 1, opp_overlap 3107561 CTGAACCTGAAAAAA GGCGAAC-GCG TGG CGCTGATTGCC GAAACGAGTAGCGGG TERM 3863 3108802 - 3108814 + G 70 -4.1 -4.63218 | CGGAAATTCATTCTG GCGAT GCG ATTGC TTTTGTTACCGCCCA S3222 3107379 - 3109067 + | acyl-CoA synthetase TERM 3864 3109507 - 3109470 - g 70 -9.9 -3.16039 | gap 1 AACGACTGGCAGCAA TGGCGGACGAAATTACGC TGG GCGTT-TTTCGCCCGACA GCCGTGTATGGTCCC S3223 3109082 - 3109978 + | hypothetical protein S3224 3110011 - 3110259 + | hypothetical protein S3225 3110259 - 3110609 + | putative class II aminotransferase S3226 3110642 - 3111430 + | putative class II aminotransferase TERM 3865 3111437 - 3111464 + T 100 -20.6 -3.99878 | opp_overlap 3111431 3111432 AAGCAGTAATGTGAG CCCGCCGTGGTG TTTG CGCCACGGCGGG TTTAATGTTGTCTGT S3227 3112545 - 3111466 - | hypothetical protein S3228 3113612 - 3112542 - | hypothetical protein TERM 3866 3113625 - 3113638 + r 86 -5.3 -5.5604 | CATCTCACTAACGCC CTCAA TCCT TTGAG TTTTTTATTCATTGA S3229 3114203 - 3113643 - | hypothetical protein TERM 3867 3113788 - 3113837 + g 82 -2.8 -5.21683 | gap 1, overlap 3113779 AAGCGCCAGGCAACG CGTCCCTGTCCATTGCCGTCAAT AACGA ATTG-CGCCCACGGATAGCGGCG TTTATTTTTTTCGAT S3230 3115039 - 3114215 - | hypothetical protein yghQ 3116388 - 3115039 - | hypothetical protein yghR 3117192 - 3116434 - | hypothetical protein TERM 3868 3116886 - 3116910 + g 72 -7 -4.24384 | opp_overlap 3116886 3116889, overlap 3116881 AGAAGCAGTACATAA TCACCGCCGC CCATA GCGCCGGAGA TTTGGTTTTCATGCT yghS 3117937 - 3117224 - | hypothetical protein yghT 3118111 - 3118803 + | hypothetical protein TERM 3869 3118845 - 3118811 - T 100 -13.7 -4.68994 | opp_overlap 3118817 ATCACTAGTCAAAAA TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA GGAAGGTTAAATCAA TERM 3870 3118817 - 3118839 + T 79 -9.1 -4.08692 | opp_overlap 3118811 AGTCAAAAATGGAAA TGCCCGATC GCCAG GACCGGGCA TTTTCAGGAAGGTTA pitB 3120351 - 3118852 - | low-affinity phosphate transport protein TERM 3871 3120628 - 3120592 - R 83 -13.2 -3.16668 | opp_overlap 3120593 3120627 GAATATTTTGATTAA TCCCCGTACTAATTAT TCTTC ATAATCAGTACGGGGT TGCTACAACATGTAT TERM 3872 3120593 - 3120627 + r 90 -14.5 -3.15249 | opp_overlap 3120592 AATATTTTGATTAAT CCCCGTACTAATTAT TCTTC ATAATCAGTACGGGG TTGCTACAACATGTA gsp 3122502 - 3120643 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 3873 3123164 - 3123185 + G 72 -5.8 -4.34771 | gap 1 TCTGGTTACAGGGTG CCGC-GCCG TTCCT CGGCGGTGG TTTTGGTCACTTTTA TERM 3874 3123367 - 3123393 + G 81 -10.1 -3.91897 | TTTGGCAACGTGGTG CTCGGCGGCGT GTATG ATGCCGCAGAG TTTCTGGATGCGGGA S3237 3122659 - 3123573 + | putative glutathione S-transferase YghU TERM 3875 3123680 - 3123647 - T 73 -9.5 -3.31322 | opp_overlap 3123654 3123655 3123657, overlap 3123615 3123648 GGCAATCGTGCACAA TGCCTGATGCGACGC TGCC GCGTCTTATCAGGCC TACAAAAGCTAATCA TERM 3876 3123679 - 3123648 - T 81 -13 -2.58579 | opp_overlap 3123654 3123655 3123657, overlap 3123615 3123647 GCAATCGTGCACAAT GCCTGATGCGACGC TGCC GCGTCTTATCAGGC CTACAAAAGCTAATC hybG 3123944 - 3123696 - | hydrogenase 2 accessory protein HypG hypA 3124419 - 3124078 - | hydrogenase nickel incorporation protein HybF TERM 3877 3124321 - 3124286 - G 88 -8.4 -4.67641 | gap 2, opp_overlap 3124286 3124287, overlap 3124287 3124288 3124290 ATTTCAAAACTAAAA CGGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CCA ATTTCCAGCCACACG TERM 3878 3124320 - 3124287 - G 72 -9.7 -3.395 | gap 2, opp_overlap 3124287 3124286, overlap 3124286 3124288 3124290 TTTCAAAACTAAAAC GGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CC AATTTCCAGCCACAC TERM 3879 3124320 - 3124288 - G 76 -12.1 -2.62977 | gap 1, opp_overlap 3124287 3124286, overlap 3124287 3124286 3124290 TTCAAAACTAAAACG GACGGCGCTCTCCT CAACGC AGGAGAGCGC-GCC AATTTCCAGCCACAC TERM 3880 3124318 - 3124290 - G 71 -11.1 -2.84272 | gap 1, opp_overlap 3124287 3124286, overlap 3124287 3124288 3124286 CAAAACTAAAACGGA CGGCGCTCTCCT CAACGC AGGAGAGCGC-G CCAATTTCCAGCCAC hybE 3124900 - 3124412 - | hydrogenase 2-specific chaperone TERM 3881 3124465 - 3124442 - G 90 -13.2 -3.53012 | gap 1, opp_overlap 3124429 3124443, overlap 3124444 CCTCCTGCGGCCAAA CA-GCAGGGCG CGA CGCCCTGCGTG TGGTACATCCGGATT TERM 3882 3124443 - 3124463 + g 77 -12.5 -2.80816 | opp_overlap 3124442 3124444, overlap 3124429 CTCCTGCGGCCAAAC AGCAGGGCG CGA CGCCCTGCG TGTGGTACATCCGGA TERM 3883 3124462 - 3124444 - G 100 -16 -3.34398 | opp_overlap 3124443 3124429, overlap 3124442 TCCTGCGGCCAAACA GCAGGGCG CGA CGCCCTGC GTGTGGTACATCCGG hybD 3125387 - 3124893 - | hydrogenase 2 maturation endopeptidase TERM 3884 3125034 - 3125049 + g 70 -4.6 -4.57569 | CGATTCCGGGATCAC GCCGAC CAGG GTCAGC TTTTTCGGAAACTCA hybC 3127090 - 3125387 - | hydrogenase 2 large subunit TERM 3885 3126061 - 3126073 + g 78 -10.5 -3.50335 | overlap 3126057 3126069 TGGTACCTTCCCACG GCGCC TGT GGCGC TTCGTCTTTATACCA TERM 3886 3126936 - 3126950 + g 72 -4.9 -4.61633 | opp_overlap 3126928, overlap 3126939 3126943 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 3887 3127109 - 3127120 + r 76 -4.4 -5.07652 | overlap 3127098 3127103 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3128265 - 3127087 - | putative hydrogenase 2 b cytochrome subunit hybA 3129241 - 3128255 - | hydrogenase 2 protein HybA TERM 3888 3128898 - 3128911 + g 72 -6.7 -4.29106 | CAGTTCGGATCGACG CAGTG CATA CACTG TTTCTTAATGTACGC S3245 3130362 - 3129244 - | hydrogenase 2 small subunit S3246 3130838 - 3130551 - | hypothetical protein TERM 3889 3130851 - 3130876 + r 79 -10.7 -3.63744 | overlap 3130850 CATCGTTCACCTCAT TCGTTATATAT CGCC ATATATAACGA TATTTTAGGCAAAGA S3247 3131367 - 3130957 - | hypothetical protein TERM 3890 3132552 - 3132565 + G 70 -4.5 -4.45544 | CGAGTTGCTGCACGA GTGGA AAAT TCCGC TTTTAATTCATCAAC S3249 3132001 - 3133041 + | aldo-keto reductase TERM 3891 3133073 - 3133053 - T 100 -15.4 -3.62775 | overlap 3133042 ATGACCTGTTAATAA CGGGCGCG CGAAC CGCGCCCG AATCAGATCAGTGAT yqhA 3133575 - 3133081 - | hypothetical protein yghA 3133766 - 3134650 + | oxidoreductase TERM 3892 3134682 - 3134656 - Tf 100 -13.8 -5.44119 | opp_overlap 3134635 3134656 3134653 TTTAGGTTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTGTGAATTCAC TERM 3893 3134656 - 3134682 + TF 87 -14.5 -2.86539 | opp_overlap 3134656, overlap 3134635 3134653 TTTAGGTTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTGTGAATTCAC TERM 3894 3134887 - 3134913 + GT 72 -10.8 -2.78298 | overlap 3134886 GCAATAGATTTTGTA GGCCTGATGAGC GTA GCGCATCAGGCA ATTCTACTTTACTTC exbD 3135347 - 3134922 - | biopolymer transport protein ExbD S3252 3134826 - 3135071 + | hypothetical protein exbB 3136088 - 3135354 - | biopolymer transport protein ExbB S3255 3136236 - 3136081 - | hypothetical protein TERM 3895 3136337 - 3136327 - H 73 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 3896 3136480 - 3136468 - g 85 -6.9 -4.75174 | overlap 3136471 TATGGAAGCCAAAAA GCACG CGA CGCGC AATCGCGCCAATGGC metC 3136340 - 3137527 + | cystathionine beta-lyase TERM 3897 3138029 - 3138055 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT yghB 3137667 - 3138326 + | hypothetical protein TERM 3898 3138337 - 3138362 + TF 86 -11.9 -3.5486 | overlap 3138335 CCTGACGATTTTCCC CGTTCCCGG CTGCTGTA CCGGGAACG TATTTAATTCCCCTG yqhC 3139493 - 3138366 - | putative ARAC-type regulatory protein TERM 3899 3140362 - 3140347 - gH 71 -3.2 -4.8622 | CTGTGGAATGAAAAA CGCG AGACCAAG CGCG CTAAGCTGCTGCAAT yqhD 3139459 - 3140622 + | putative oxidoreductase TERM 3900 3140709 - 3140680 - fH 77 -10.7 -3.36968 | opp_overlap 3140683, overlap 3140682 3140683 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 3901 3140707 - 3140682 - fH 83 -13.3 -3.25192 | opp_overlap 3140683, overlap 3140680 3140683 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 3902 3140683 - 3140706 + FH 100 -16.8 -3.25823 | opp_overlap 3140683 3140682 3140680 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 3903 3140706 - 3140683 - fH 95 -16.8 -2.54794 | opp_overlap 3140683, overlap 3140682 3140680 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3140727 - 3141554 + | 2,5-diketo-D-gluconate reductase A TERM 3904 3141566 - 3141596 + F 73 -7.4 -4.10429 | overlap 3141567 CTAACGTGCAAATTC TCCCGGTGGCGGTA ATG TTCCGCTACCGGAC TTTTCAGAAATCATT TERM 3905 3141567 - 3141595 + F 75 -10.9 -3.05775 | overlap 3141566 TAACGTGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT yqhG 3141754 - 3142680 + | hypothetical protein yqhH 3142731 - 3142988 + | putative outer membrane lipoprotein TERM 3906 3142997 - 3143024 + T 100 -14.9 -5.78622 | opp_overlap 3142997 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC TERM 3907 3143024 - 3142997 - T 100 -12.7 -5.73339 | opp_overlap 3142997 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC S3263 3144272 - 3143031 - | hypothetical protein TERM 3908 3143090 - 3143102 + g 90 -4.8 -5.44119 | TCACCGGACGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC TERM 3909 3144099 - 3144082 - G 72 -6.9 -4.25957 | overlap 3144079 ATAGAACAGAAAGAA CAGCCGC CAAA GCAGCCG CGCATAATGTTGACC TERM 3910 3145364 - 3145323 - R 71 -7.4 -3.93913 | gap 1, overlap 3145324 3145327 AAAGAGAAATCGAAA GGTAT-TCCATACTCGCCC TCCTC GGGCGAGTATGAAGATTAC GGTACCGGATTGACC TERM 3911 3145359 - 3145327 - R 78 -12.8 -2.6993 | overlap 3145323 3145324 AGAAATCGAAAGGTA TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG ATTACGGTACCGGAT sufI 3146773 - 3145361 - | repressor protein for FtsI plsC 3147585 - 3146848 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase parC 3150077 - 3147819 - | DNA topoisomerase IV subunit A TERM 3912 3149248 - 3149269 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACGC TERM 3913 3150206 - 3150180 - R 75 -11.5 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGACGGCGA TAAAGGCATCAATGT S3268 3151105 - 3150623 - | hypothetical protein ygiW 3151550 - 3151158 - | hypothetical protein ygiX 3151702 - 3152361 + | DNA-binding transcriptional regulator QseB TERM 3914 3152610 - 3152589 - g 70 -3.7 -4.72863 | CCAAATAAATTAAAA CACGGTCAT GTTG ATGACGATG CGCTGACCTTTGCCA ygiY 3152358 - 3153632 + | sensor protein QseC TERM 3915 3153641 - 3153672 + T 100 -14.6 -4.30576 | opp_overlap 3153650 CTGGTAACTTCTCTG TCTATGAGAGCCGT TAAA ACGACTCTCATAGA TTTTACTAATAGCAA S3272 3154010 - 3153678 - | hypothetical protein TERM 3916 3154044 - 3154064 + H 74 -5.5 -4.56729 | opp_overlap 3154044 3154043 3154046 AAATCCATTTATAAT TATCAACAT GAC ACGTTGATA TTTTCATCTTTTACT TERM 3917 3154446 - 3154391 - g 81 -12.6 -3.18199 | gap 1, opp_overlap 3154399 3154423, overlap 3154394 CAATGGTCAACTGAA CGACACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATGTCC GCATCGTTCGCGCCG TERM 3918 3154443 - 3154394 - g 81 -12.9 -2.78712 | gap 1, opp_overlap 3154399 3154423, overlap 3154391 TGGTCAACTGAACGA CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATG TCCGCATCGTTCGCG mdaB 3154329 - 3154910 + | modulator of drug activity B ygiN 3154941 - 3155255 + | hypothetical protein TERM 3919 3155265 - 3155293 + T 71 -7.3 -4.15396 | overlap 3155267 ATTTAATCCTGCCTT GTTTGCCCGGCCA TCC TGACCGGGCAATG TTCTTTCCTTTAAAC TERM 3920 3155267 - 3155291 + T 100 -14.3 -3.66578 | overlap 3155265 TTAATCCTGCCTTGT TTGCCCGGCCA TCC TGACCGGGCAA TGTTCTTTCCTTTAA parE 3157195 - 3155303 - | DNA topoisomerase IV subunit B TERM 3921 3156924 - 3156899 - G 78 -10.5 -3.48395 | ATTTTTGTTAGAGAA TTTACCGCCTG CATG CAGACGGCAAA GAATCAGTTCAACCG yqiA 3157805 - 3157224 - | esterase YqiA icc 3158632 - 3157805 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase TERM 3922 3158616 - 3158584 - G 100 -14.2 -4.14392 | opp_overlap 3158575 3158574, overlap 3158585 CGGTAATTTGTAAAA TCCTTCCTCTGGCC TCACC AGCCAGAGGAAGGG TTAACAGGCTTTCCA TERM 3923 3158615 - 3158585 - G 100 -17.7 -3.08314 | opp_overlap 3158575 3158574, overlap 3158584 GGTAATTTGTAAAAT CCTTCCTCTGGCC TCACC AGCCAGAGGAAGG GTTAACAGGCTTTCC yqiB 3159079 - 3158657 - | hypothetical protein TERM 3924 3158746 - 3158756 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA TERM 3925 3159104 - 3159156 + r 74 -6.9 -4.20712 | overlap 3159112 CTCATTTTTTAACGC TTGATGATGCAGCTGCAGCCATTGC AAA GCGATGACCGACGCTGCGTTGTCGA TTTTCCCCTCTTCTA nudF 3159709 - 3159080 - | ADP-ribose pyrophosphatase NudF tolC 3159914 - 3161395 + | outer membrane channel protein TERM 3926 3161622 - 3161633 + G 71 -2.2 -4.9218 | overlap 3161621 CACCAGTCGCTCTCG CGGT TGCC ACTG TTTTTATGCTGGCTG ygiA 3161395 - 3161655 + | hypothetical protein TERM 3927 3162073 - 3162043 - gf 88 -8.3 -4.59773 | gap 1, overlap 3162044 3162046 CGCGACGGGTAAAAA CTATGGCGCAGCCC AGCC AGGCCGCACCAT-G ACCGTACCGAAGACG TERM 3928 3162071 - 3162046 - gf 77 -11.1 -3.24422 | overlap 3162043 3162044 GACGGGTAAAAACTA TGGCGCAGCCC AGCC AGGCCGCACCA TGACCGTACCGAAGA TERM 3929 3162180 - 3162162 - gf 70 -5.2 -4.41348 | CTGTTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC ygiB 3161543 - 3162214 + | hypothetical protein TERM 3930 3162282 - 3162326 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 3162296, overlap 3162285 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGAC TERM 3931 3162285 - 3162323 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 3162296, overlap 3162282 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT ygiC 3162220 - 3163380 + | putative synthetase/amidase TERM 3932 3163422 - 3163381 - T 75 -9.6 -3.61517 | gap 2, opp_overlap 3163387 3163388 3163390, overlap 3163390 ATTTTTGTTGAATAA GCCA-CGA-TACCGGATGGC ACTC GCCATCCGGTAATTGTTAGC CTATCTGCACCGACA TERM 3933 3163387 - 3163414 + T 100 -14.2 -3.67558 | opp_overlap 3163381 3163390, overlap 3163388 3163390 GTTGAATAAGCCACG ATACCGGATGGC ACTC GCCATCCGGTAA TTGTTAGCCTATCTG TERM 3934 3163388 - 3163413 + T 100 -17.7 -2.80053 | opp_overlap 3163381 3163390, overlap 3163387 3163390 TTGAATAAGCCACGA TACCGGATGGC ACTC GCCATCCGGTA ATTGTTAGCCTATCT TERM 3935 3163390 - 3163411 + T 93 -15.9 -2.94313 | opp_overlap 3163381 3163390, overlap 3163388 3163387 GAATAAGCCACGATA CCGGATGGC ACTC GCCATCCGG TAATTGTTAGCCTAT TERM 3936 3163411 - 3163390 - T 93 -15.9 -2.84619 | opp_overlap 3163390 3163388 3163387, overlap 3163381 GAATAAGCCACGATA CCGGATGGC ACTC GCCATCCGG TAATTGTTAGCCTAT ygiD 3164233 - 3163418 - | hypothetical protein ygiE 3164349 - 3165122 + | zinc transporter ZupT TERM 3937 3165169 - 3165126 - T 72 -4.7 -4.59853 | gap 1, opp_overlap 3165137 3165166, overlap 3165129 3165131 3165132 3165134 GGAATTGGTTAAAAA CAAC-ATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCAGCTT CACGAAAGCCTTATT TERM 3938 3165165 - 3165129 - T 95 -11 -4.40963 | opp_overlap 3165137, overlap 3165126 3165131 3165132 3165134 ATTGGTTAAAAACAA CATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCA GCTTCACGAAAGCCT TERM 3939 3165163 - 3165131 - T 100 -13.6 -3.80746 | opp_overlap 3165137, overlap 3165129 3165126 3165132 3165134 TGGTTAAAAACAACA TCAGAAGTTGTCCA GCACA TGGACAACTTCTGC CAGCTTCACGAAAGC TERM 3940 3165162 - 3165132 - T 100 -17.1 -2.87725 | opp_overlap 3165137, overlap 3165131 3165129 3165126 3165134 GGTTAAAAACAACAT CAGAAGTTGTCCA GCACA TGGACAACTTCTG CCAGCTTCACGAAAG TERM 3941 3165160 - 3165134 - T 85 -13.9 -2.97636 | opp_overlap 3165137, overlap 3165132 3165131 3165129 3165126 TTAAAAACAACATCA GAAGTTGTCCA GCACA TGGACAACTTC TGCCAGCTTCACGAA TERM 3942 3165137 - 3165157 + T 73 -9.8 -3.31322 | opp_overlap 3165134 3165132 3165131 3165129 3165126 AAAACAACATCAGAA GTTGTCCA GCACA TGGACAAC TTCTGCCAGCTTCAC TERM 3943 3165576 - 3165555 - T 86 -5.1 -5.46706 | opp_overlap 3165555 AGGGCAAAATAAAAA CCGAAGCCA GCTA CAACTTCGG TTTCTTGATTAAGGC ribB 3166264 - 3165611 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 3944 3165979 - 3166007 + g 90 -10.3 -4.41206 | opp_overlap 3165984 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT S3287 3166578 - 3166928 + | hypothetical protein TERM 3945 3166945 - 3166981 + F 78 -6.2 -4.7033 | gap 1, opp_overlap 3166947 CATTTGTCTTTAATG CACTGTAAATTATGA ATTAATCC TC-TAATTTACAGTG TTTTCTATTACATTA S3288 3167184 - 3167549 + | insertion sequence 2 OrfA protein S3289 3167507 - 3168358 + | insertion sequence 2 OrfB protein S3290 3168409 - 3168684 + | IS1 orfA S3291 3168603 - 3169106 + | IS1 orfB S3292 3169116 - 3169391 + | IS4 orf TERM 3946 3169402 - 3169373 - T 89 -9.3 -4.59109 | opp_overlap 3169366, overlap 3169375 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACCGTTAGTGAG TERM 3947 3169400 - 3169375 - T 100 -16.3 -3.90762 | opp_overlap 3169366, overlap 3169373 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACCGTTAGTG TERM 3948 3169777 - 3169752 - T 77 -11.9 -2.81584 | opp_overlap 3169757, overlap 3169757 ATCTAATACAAACAC TAAAACGGGCC ATCA GGCCCGTTATA TCAGTGCTCTAACTC TERM 3949 3169757 - 3169772 + T 86 -11.8 -3.53164 | opp_overlap 3169752 3169757 ATACAAACACTAAAA CGGGCC ATCA GGCCCG TTATATCAGTGCTCT TERM 3950 3169772 - 3169757 - T 100 -11.8 -4.5394 | opp_overlap 3169757, overlap 3169752 ATACAAACACTAAAA CGGGCC ATCA GGCCCG TTATATCAGTGCTCT glgS 3169978 - 3169778 - | glycogen synthesis protein GlgS S3295 3170300 - 3170599 + | IS1 orfA TERM 3951 3171957 - 3171979 + T 100 -8.4 -5.4251 | opp_overlap 3171956 TTTCAGCTATGAACG TCCCTGGC ACAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3952 3172158 - 3172139 - T 86 -11.4 -3.71649 | overlap 3172123 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTACAGAAGGAAAG TERM 3953 3172333 - 3172355 + T 100 -8.4 -5.4251 | opp_overlap 3172331 3172329 3172333 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3954 3172534 - 3172515 - T 86 -11.4 -3.71649 | opp_overlap 3172515 3172514, overlap 3172498 3172508 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG TERM 3955 3172708 - 3172730 + T 100 -8.4 -5.4251 | opp_overlap 3172708 3172706 3172704 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3956 3172909 - 3172890 - T 86 -11.4 -3.71649 | opp_overlap 3172889 3172890, overlap 3172873 3172883 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG S3298 3174541 - 3173108 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase glnE 3177429 - 3174589 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 3957 3175582 - 3175557 - G 72 -11.1 -3.06261 | opp_overlap 3175549 3175579 CCGCAATGCGTAACA GCTGCGCCTGT TTGA ACTGACGCAGC GCCTCAAGCTGTTGT TERM 3958 3176604 - 3176587 - G 70 -4 -4.6951 | ACGACGGAAAACAAA CGGGCG CAGCAT CGCACG CAACTCGTTAGCATA TERM 3959 3177400 - 3177366 - G 81 -9.3 -4.07687 | gap 1, opp_overlap 3177366 ATTCCTCGGCTAAAA GCTCTGGCAG-CCGCT CAAC AACGGTCTGCCAGTAC TGCTGTAACGGTGAA ygiF 3178753 - 3177452 - | hypothetical protein TERM 3960 3177808 - 3177782 - G 72 -5 -4.65895 | opp_overlap 3177769, overlap 3177783 TTTGGCATCTAAAAA CGGCTGCCATGC TTT GCTTACCAGCCA TTCGGTCAACGCCAG TERM 3961 3178402 - 3178386 - G 71 -2.9 -4.82901 | TTTTCGCGATAAAAA TCGGTGC TAA ACAGCGA CTGCACGCGGGAAGC TERM 3962 3179427 - 3179417 - g 83 -5.4 -5.093 | GTTAAAAGAAGAAAA TCAG AAA CTGA AAAACGAGCTGATTG ygiM 3178995 - 3179615 + | putative signal transduction protein TERM 3963 3179785 - 3179812 + G 95 -11.2 -4.47397 | overlap 3179786 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTGTTTCT TERM 3964 3179786 - 3179811 + G 95 -14.7 -3.26811 | overlap 3179785 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTGTTTC TERM 3965 3179884 - 3179896 + G 90 -9.1 -4.4773 | opp_overlap 3179871 3179878 AACGGAAATCCGGTT CCGGT TAC ACCGG TTTTACTTGCTATAC TERM 3966 3180087 - 3180097 + G 78 -8.2 -4.2679 | overlap 3180086 3180087 CCGTTACGCGTACTG CGCG TGG CGCG TTTTGCTGCGCGTTA TERM 3967 3180270 - 3180291 + G 75 -5.1 -4.63218 | gap 1 TTCTTCCAGGTACTG CGCG-ATTGC GGC GCACTTCGCG TTTTATTCCCGGAAA cca 3179679 - 3180917 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase uppP 3181900 - 3181079 - | undecaprenyl pyrophosphate phosphatase folB 3182359 - 3181991 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiP 3184025 - 3183024 - | transcriptional activator TtdR ygiH 3182464 - 3183081 + | putative glycerol-3-phosphate acyltransferase PlsY ttdA 3184235 - 3185044 + | tartrate dehydratase subunit alpha TERM 3968 3185626 - 3185611 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 3185072 - 3185677 + | L(+)-tartrate dehydratase subunit beta TERM 3969 3185685 - 3185704 + F 89 -9.3 -4.57073 | opp_overlap 3185678 3185679 TCAAATAACCCTCCC GGAGAGG CTCACC CCTCTCC TTTTTCGCAGGCATA TERM 3970 3185890 - 3185926 + G 71 -11 -2.91912 | gap 1, overlap 3185894 CCCGTGCCGGGTGCC GTGGTGGCGATGGTGGG TATC TCCATCATCGCCAT-AC TCTCTCCCTGGCTGC TERM 3971 3185894 - 3185923 + G 90 -15.1 -2.7035 | overlap 3185890 TGCCGGGTGCCGTGG TGGCGATGGTGGG TATC TCCATCATCGCCA TACTCTCTCCCTGGC TERM 3972 3186130 - 3186120 - g 72 -5.4 -4.57073 | opp_overlap 3186127 GATTCTGGTGAAAAA GATG GGG CATC GCACGCTGTTTCTCG ygjE 3185725 - 3187188 + | hypothetical protein ygjD 3188244 - 3187231 - | O-sialoglycoprotein endopeptidase TERM 3973 3187364 - 3187389 + g 84 -3.9 -5.243 | gap 1, overlap 3187362 GTACAAAATTCCGGA CGC-GCGTAGAA CAC TTCGCCGCGGCG TTTTTTCATCATTTC TERM 3974 3187627 - 3187615 - G 72 -5.5 -4.50976 | overlap 3187622 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 3975 3188163 - 3188178 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 3976 3188449 - 3188432 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3188482 - 3188697 + | 30S ribosomal protein S21 TERM 3977 3188741 - 3188774 + F 82 -7.6 -4.62475 | overlap 3188745 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 3978 3188745 - 3188771 + F 95 -10.9 -4.40882 | gap 1, overlap 3188741 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 3979 3189258 - 3189243 - g 70 -3.9 -4.60487 | opp_overlap 3189257, overlap 3189257 CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCTCGCT TERM 3980 3190140 - 3190107 - g 70 -5.9 -4.20696 | opp_overlap 3190107 3190118, overlap 3190099 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 3188808 - 3190553 + | DNA primase TERM 3981 3191521 - 3191501 - g 73 -9.1 -3.60948 | GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTGCCG rpoD 3190748 - 3192574 + | RNA polymerase sigma factor RpoD TERM 3982 3192713 - 3192738 + F 100 -9.8 -5.61596 | opp_overlap 3192713 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3983 3192738 - 3192713 - f 72 -9.1 -3.61398 | opp_overlap 3192713 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT S3314 3192746 - 3194074 + | IS4 orf TERM 3984 3194085 - 3194056 - f 89 -9.3 -4.59109 | opp_overlap 3194057, overlap 3194058 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCCCCCGGTGAC TERM 3985 3194057 - 3194084 + F 81 -12.8 -3.14564 | opp_overlap 3194056 3194058 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCCCCGGTGA TERM 3986 3194083 - 3194058 - f 100 -16.3 -3.90762 | opp_overlap 3194057, overlap 3194056 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCCCCGGTG TERM 3987 3194824 - 3194845 + F 100 -14.5 -5.71295 | opp_overlap 3194824 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 3988 3194845 - 3194824 - f 100 -14.5 -3.91597 | opp_overlap 3194824 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 3989 3196011 - 3196054 + G 77 -6.6 -4.49556 | gap 1, overlap 3196021 CATGAACACGGTCAA TGTTG-CGGTGGTCGCCACGG TCG CGGCGGCGGTCGTCGGCAACG TTTCTTTGGTCACGG TERM 3990 3196475 - 3196460 - g 100 -3.3 -5.72622 | opp_overlap 3196467 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT yqjI 3195888 - 3196511 + | hypothetical protein TERM 3991 3196556 - 3196512 - f 74 -10.6 -3.1886 | opp_overlap 3196529, overlap 3196513 ACGCAACTGGATTAA TCGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACGC TTGACGCGCCTTATC TERM 3992 3196555 - 3196513 - f 83 -14.1 -2.50994 | opp_overlap 3196529, overlap 3196512 CGCAACTGGATTAAT CGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACG CTTGACGCGCCTTAT TERM 3993 3196600 - 3196631 + F 76 -11.6 -2.64099 | opp_overlap 3196609 3196611, overlap 3196599 CTACACACCCCGCAG GCCTGATAAGATGC GCCA GCATCGCATCAGGC ATTGTGCTCCAACCG TERM 3994 3196680 - 3196709 + F 82 -11.3 -3.57144 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA TERM 3995 3198395 - 3198376 - f 74 -5.8 -4.57073 | gap 1, overlap 3198379 TATCTTGCCCAAAAA TCA-GGCAA TTA TTGCCCTGA AAACGTGCATTTGCG ygjG 3198576 - 3199982 + | putrescine--2-oxoglutarate aminotransferase TERM 3996 3199988 - 3200020 + F 100 -12.8 -4.82901 | opp_overlap 3199990, overlap 3199990 AGAAGCGTAATATCA AATCGGATGGCGAT ACGAC GTCGCCATCCGATC TTTTTATACGACGCG TERM 3997 3200018 - 3199990 - f 100 -14.7 -3.9344 | opp_overlap 3199988 3199990 AAGCGTAATATCAAA TCGGATGGCGA TACGACG TCGCCATCCGA TCTTTTTATACGACG TERM 3998 3199990 - 3200018 + F 100 -15.4 -4.03995 | opp_overlap 3199990, overlap 3199988 AAGCGTAATATCAAA TCGGATGGCGAT ACGAC GTCGCCATCCGA TCTTTTTATACGACG TERM 3999 3200219 - 3200232 + F 70 -2.3 -5.0133 | overlap 3200204 CGGCACCAGGCTGGT CACGG TTTG CAGTG TTTTTTCCCCACATC TERM 4000 3201500 - 3201482 - g 95 -10.2 -4.72272 | opp_overlap 3201495 CTGGTGTATGAAAAA GCCCGCGA TGG TCGCGCGC TGCCGCTGCTAGTCT ebgR 3200573 - 3201556 + | DNA-binding transcriptional repressor EbgR TERM 4001 3201563 - 3201605 + F 73 -4.2 -4.73614 | gap 1, opp_overlap 3201570, overlap 3201564 3201565 ACCCGTTAAATCCCC TTACA-CACTGTTCGGCAA TCATTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC TERM 4002 3201879 - 3201891 + G 91 -7.7 -5.03314 | GCCCTTAAGCAGTCA GTGGA ATT TCCAC TTTTTTGACCATCCG TERM 4003 3202562 - 3202549 - g 75 -4.5 -4.74103 | opp_overlap 3202549 TTGGCAATTGAAAAA CTGAC CAGC GCCAG CTTTGCTTTTACTGT TERM 4004 3203696 - 3203674 - g 72 -7.6 -3.8647 | ACGCAGCAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTGCA ebgA 3201739 - 3204825 + | cryptic beta-D-galactosidase subunit alpha TERM 4005 3205240 - 3205252 + G 72 -7.7 -3.96216 | opp_overlap 3205237 3205236 3205240 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 3204822 - 3205271 + | cryptic beta-D-galactosidase subunit beta TERM 4006 3205308 - 3205272 - f 76 -8 -4.27512 | overlap 3205275 3205278 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCACCGCTA CCCTACACATTTTCG TERM 4007 3205305 - 3205275 - f 87 -9.7 -4.24183 | overlap 3205272 3205278 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCACCG CTACCCTACACATTT TERM 4008 3205302 - 3205278 - f 80 -12.2 -3.09866 | overlap 3205275 3205272 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCA CCGCTACCCTACACA TERM 4009 3205580 - 3205566 - g 72 -5.6 -4.56775 | ACGCGTGGGTAAAAA GTTCGC TGG GCGGAC GTTGGGCATTTATTA TERM 4010 3206335 - 3206323 - g 70 -4.7 -4.45664 | CGAACTTAACGAAAA CGGCG TTC CGGCG CGCGCAGCATGGATC ygjI 3205334 - 3206767 + | putative oxidoreductase TERM 4011 3206792 - 3206828 + F 76 -8.3 -4.04922 | opp_overlap 3206787, overlap 3206794 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAATAG TTTCTGCCTTTATAT TERM 4012 3206794 - 3206825 + F 75 -11.1 -3.05274 | gap 1, opp_overlap 3206787, overlap 3206792 AAAAATGAGCAGGCA TTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAA TAGTTTCTGCCTTTA TERM 4013 3208580 - 3208557 - g 78 -8.2 -4.15833 | gap 1 ACTATCAGCGCAAAA TCAGCGCCACC CGT GATGGC-CTGA AAGTCACCTTTGGCA ygjK 3207989 - 3210340 + | glycosyl hydrolase ygjL 3210566 - 3212584 + | putative NADPH dehydrogenase ygjM 3213045 - 3212629 - | hypothetical protein ygjN 3213356 - 3213042 - | hypothetical protein TERM 4014 3213393 - 3213423 + r 71 -6.8 -4.17296 | opp_overlap 3213395, overlap 3213394 3213397 AATTGGCAATATGAT AACATCCGTTGACA GAT TGGCAACGGATGAA TTTATCTGTGTGACG TERM 4015 3213394 - 3213422 + r 73 -10.3 -3.09896 | opp_overlap 3213395, overlap 3213393 3213397 ATTGGCAATATGATA ACATCCGTTGACA GAT TGGCAACGGATGA ATTTATCTGTGTGAC TERM 4016 3213421 - 3213395 - R 93 -13.8 -3.52073 | opp_overlap 3213394 3213393 3213397 TTGGCAATATGATAA CATCCGTTGACA GAT TGGCAACGGATG AATTTATCTGTGTGA TERM 4017 3213397 - 3213419 + r 71 -10.6 -2.75389 | opp_overlap 3213395, overlap 3213394 3213393 GGCAATATGATAACA TCCGTTGACA GAT TGGCAACGGA TGAATTTATCTGTGT TERM 4018 3213559 - 3213608 + r 75 -10 -3.53811 | opp_overlap 3213537 3213535 3213595 3213605, overlap 3213548 ATGCGACGCTTGCCG CGTCTTATCCGGCCTGGGGGTA ACGTGC TGAACGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 4019 3213626 - 3213595 - R 78 -12.2 -2.52795 | opp_overlap 3213559, overlap 3213605 AACGTGCTGAACGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA GGTAACTCCCAATCT ygjO 3214777 - 3213641 - | putative enzyme TERM 4020 3214290 - 3214306 + g 74 -6.5 -4.58283 | CATGCCAGCGTGGTG GTGGTCG GGC CGAGCAC TTTTTCGAACAGTTC ygjP 3214826 - 3215365 + | hypothetical protein ygjQ 3215442 - 3216134 + | hypothetical protein TERM 4021 3216984 - 3216966 - g 70 -3.8 -4.65895 | opp_overlap 3216966 3216978 CTGGTGATTGAAAAA CTGTCTGA ATG CCAGAAAG TCTGCTTTGTGCCGC ygjR 3216195 - 3217211 + | hypothetical protein TERM 4022 3217357 - 3217376 + F 100 -10.8 -5.56673 | opp_overlap 3217357 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4023 3217376 - 3217357 - f 83 -10.8 -3.66178 | opp_overlap 3217357 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4024 3217432 - 3217457 + F 100 -13.3 -5.76633 | opp_overlap 3217431 3217429 3217432 ATGCATAAAAAGCAG CGGCTGACGTC TTCC GACGTTGGCCG TTTTTTTATGTGTAA ygjT 3217482 - 3218447 + | putative transport protein TERM 4025 3218879 - 3218862 - f 75 -6.3 -4.44046 | TTTATGTTAAATAAA TGCAACC ATTA AGTTGCA AAACATGACCTCTCT ygjU 3219032 - 3220276 + | serine/threonine transporter SstT TERM 4026 3220285 - 3220309 + T 100 -12.1 -4.6468 | TAATTAATTGTTTAA CCCCTTTCGTC TAT GGCGGGAGGGG TTTTCTCTACTTTAA ygjV 3220832 - 3220281 - | hypothetical protein TERM 4027 3220888 - 3220864 - R 95 -12.9 -4.21922 | opp_overlap 3220864 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC TERM 4028 3220864 - 3220888 + r 100 -10 -5.4505 | opp_overlap 3220864 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC uxaA 3222402 - 3220915 - | altronate hydrolase TERM 4029 3221091 - 3221117 + g 77 -8.7 -4.11216 | TCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA uxaC 3223829 - 3222417 - | glucuronate isomerase TERM 4030 3222636 - 3222615 - G 72 -7.9 -3.95787 | opp_overlap 3222616 3222628, overlap 3222628 CAGCATACCGACAAA GCGGCTCAG CAGA CCGAGCTGC GCCAGTTGGGTCATC TERM 4031 3225172 - 3225192 + G 72 -8.9 -3.83502 | overlap 3225158 3225176 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTGAACCTG TERM 4032 3225176 - 3225188 + G 73 -9.1 -3.59402 | overlap 3225158 3225172 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTGAA exuT 3224314 - 3225612 + | transport protein of hexuronates TERM 4033 3225632 - 3225663 + T 100 -24.6 -4.03234 | opp_overlap 3225613 3225632 TAACGTAAGTTATAA CGACGAAGCCGCCT TATC AGGCGGCTTCGTCG TTTATATAGAAAAAA TERM 4034 3225663 - 3225632 - T 100 -24.6 -3.43564 | opp_overlap 3225632, overlap 3225613 TAACGTAAGTTATAA CGACGAAGCCGCCT TATC AGGCGGCTTCGTCG TTTATATAGAAAAAA S3341 3226332 - 3225700 - | hypothetical protein S3342 3228776 - 3226785 - | hypothetical protein S3343 3228942 - 3229217 + | IS1 orfA S3344 3229136 - 3229639 + | IS1 orfB exuR 3229747 - 3230523 + | DNA-binding transcriptional repressor ExuR TERM 4035 3230537 - 3230556 + F 87 -10.7 -4.0942 | opp_overlap 3230527 GAAATTCCTGTCCGA CAGGCGC TGCAAT GCGCCTG TTTGTCTCGTCGGTA TERM 4036 3230814 - 3230798 - f 70 -5.1 -4.44819 | opp_overlap 3230810, overlap 3230800 CAGAACATACCAAAA CAGCAAT AAC ATTGCGG TAGTGCATCTTTTAA yqjA 3230868 - 3231530 + | hypothetical protein yqjB 3231549 - 3231917 + | hypothetical protein TERM 4037 3231980 - 3232007 + F 79 -10.6 -3.48924 | opp_overlap 3231980 3231981 3231983, overlap 3231981 3231984 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG TERM 4038 3231981 - 3232006 + F 76 -11.9 -2.6914 | opp_overlap 3231980 3231981 3231983, overlap 3231980 3231984 CTGTCTATGATTAAT GAGGCGGTGGT TAAC ACTACCGCTTC GTTGTCTGGACAATC TERM 4039 3231984 - 3232003 + F 75 -10 -3.49618 | opp_overlap 3231983 3231981 3231980, overlap 3231981 3231980 TCTATGATTAATGAG GCGGTGGT TAAC ACTACCGC TTCGTTGTCTGGACA yqjD 3232456 - 3232761 + | hypothetical protein yqjE 3232764 - 3233168 + | hypothetical protein S3351 3233158 - 3233457 + | hypothetical protein TERM 4040 3233467 - 3233485 + F 85 -12.4 -3.37071 | GGTTAACTTCCCTCT GGCCGGAG CAA TTCCGGCC TTATCCATCAAATTT TERM 4041 3233625 - 3233608 - f 86 -4.1 -5.60993 | overlap 3233611 3233614 CCTTGCACAAAAAAA CAATCAG CAGC CTGAGTG GCGCAGTGGAGAGTA TERM 4042 3233622 - 3233611 - f 73 -4.4 -4.89054 | overlap 3233608 3233614 TGCACAAAAAAACAA TCAG CAGC CTGA GTGGCGCAGTGGAGA TERM 4043 3233782 - 3233795 + F 83 -4.5 -5.27335 | GTGTCCCGGGTTTTA TGCTG CTGA CGGCA TTTTTATTTCACAGC TERM 4044 3233967 - 3233984 + F 100 -11.3 -4.87626 | opp_overlap 3233967 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG TERM 4045 3233984 - 3233967 - f 100 -11.3 -5.37345 | opp_overlap 3233967 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG yqjG 3234009 - 3234995 + | putative transferase TERM 4046 3235001 - 3235018 + F 74 -11.3 -2.8664 | opp_overlap 3235001 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA TERM 4047 3235018 - 3235001 - f 100 -11.3 -5.40072 | opp_overlap 3235001 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA yhaH 3235288 - 3235656 + | putative cytochrome TERM 4048 3235681 - 3235664 - T 73 -9.9 -3.34845 | opp_overlap 3235660 3235659 3235667 AAGAATAATGATTAA GCACCTT GTAA AAGGTGC TTCAAATTGTTGACA TERM 4049 3235854 - 3235837 - T 73 -9.9 -3.37796 | opp_overlap 3235837 TGTCAGCAGTCAGAA GCACCTT GTGA AAGGTGC TTAATAGATTATTTT TERM 4050 3235837 - 3235854 + T 71 -9.9 -3.26842 | opp_overlap 3235837 TGTCAGCAGTCAGAA GCACCTT GTGA AAGGTGC TTAATAGATTATTTT yhaJ 3236759 - 3235863 - | putative LYSR-type transcriptional regulator yhaK 3236864 - 3237565 + | hypothetical protein yhaL 3237588 - 3237752 + | hypothetical protein TERM 4051 3237871 - 3237825 - T 72 -8.7 -3.69681 | gap 1, overlap 3237823 3237826 TCAACAAATTAAACA CCCCGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCAT-CAGGT ACAAAACACAACAAC TERM 4052 3237870 - 3237826 - T 79 -12.2 -2.80724 | gap 1, overlap 3237825 3237823 CAACAAATTAAACAC CCCGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCAT-CAGG TACAAAACACAACAA yhaM 3238530 - 3237964 - | hypothetical protein yhaN 3239275 - 3238466 - | hypothetical protein TERM 4053 3238681 - 3238670 - GR 75 -7.2 -4.35604 | GGAATCGAGAATAAA GCGG ATCG CCGC AAATGGGACTTCATT yhaO 3240634 - 3239303 - | putative transport system permease protein TERM 4054 3240884 - 3240867 - R 100 -11.3 -6.00086 | AGATCACAAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG TERM 4055 3240913 - 3240896 - R 80 -9.9 -3.84961 | overlap 3240908 CACCCAAGGATGAAA GCTGACA GCAA TGTCAGC CGCAGACCACTTTAA S3363 3242273 - 3240909 - | putative L-serine deaminase TERM 4056 3242338 - 3242304 - R 75 -11.5 -3.05384 | gap 1, opp_overlap 3242317 3242318, overlap 3242318 TTGCCGTTCAGTGAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCTTTACGCACT yhaR 3242734 - 3242345 - | hypothetical protein tdcE 3245042 - 3242748 - | formate acetyltransferase 3 TERM 4057 3243238 - 3243260 + g 70 -5.5 -4.33854 | GACTGGGTAGGGACG GCGTTGCGA TAGGT TGGCAGCGC TTTAATTTTCTTCAT TERM 4058 3243633 - 3243643 + g 70 -6.8 -4.07687 | overlap 3243630 CAGCACGTCGTCCAT CAGC GGT GCTG TTTTCGGCCCGACCT TERM 4059 3244638 - 3244669 + g 81 -8.8 -4.35461 | gap 1 ATATTCAAATTCACT GTCCATTTCACGGCC ATA GGC-GTGGAATGAAC TTTTAATCATATTAA tdcD 3246296 - 3245076 - | propionate/acetate kinase TERM 4060 3246110 - 3246140 + g 70 -11 -2.74144 | overlap 3246110 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA TERM 4061 3246110 - 3246141 + g 73 -9.4 -3.57263 | gap 1, overlap 3246110 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT tdcC 3247641 - 3246310 - | threonine/serine transporter TdcC tdcB 3248652 - 3247663 - | threonine dehydratase TERM 4062 3247715 - 3247736 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA tdcA 3249689 - 3248751 - | DNA-binding transcriptional activator TdcA tdcR 3249879 - 3250223 + | DNA-binding transcriptional activator TdcR TERM 4063 3250995 - 3251009 + F 75 -2.9 -5.23396 | CTTTTTTTCACCCGA TCATT TTAAT AATGA TTTTTATTGATTATT TERM 4064 3252359 - 3252333 - g 72 -5 -4.66833 | overlap 3252334 TGGCAACCGCAAAAA TGCCTGATGCGC TAC GCTTATCAGGCC TACGCCATCTCTGCA S3374 3252275 - 3252439 + | hypothetical protein TERM 4065 3252594 - 3252567 - T 100 -15 -4.07568 | opp_overlap 3252574, overlap 3252574 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTATATCAGGTGAAA TERM 4066 3252574 - 3252587 + T 93 -9.5 -4.72846 | opp_overlap 3252574 3252567 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTATATCA TERM 4067 3252587 - 3252574 - T 100 -9.5 -5.0925 | opp_overlap 3252574, overlap 3252567 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTATATCA TERM 4068 3252707 - 3252680 - T 100 -15 -4.07568 | opp_overlap 3252687, overlap 3252687 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTACATCAGGTGAAA TERM 4069 3252700 - 3252687 - T 100 -9.5 -5.0925 | opp_overlap 3252687, overlap 3252680 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTACATCA TERM 4070 3252687 - 3252700 + T 93 -9.5 -4.67353 | opp_overlap 3252687 3252680 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTACATCA TERM 4071 3252820 - 3252793 - T 100 -15 -4.07568 | opp_overlap 3252800, overlap 3252800 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAAACAGGTGAAA TERM 4072 3252813 - 3252800 - T 100 -9.5 -5.0925 | opp_overlap 3252800, overlap 3252793 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAAACA TERM 4073 3252800 - 3252813 + T 93 -9.5 -4.65895 | opp_overlap 3252800 3252793 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAAACA yhaD 3254382 - 3253237 - | glycerate kinase I TERM 4074 3254405 - 3254416 + r 74 -7.2 -4.34263 | opp_overlap 3254405 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 3255369 - 3254479 - | tartronate semialdehyde reductase TERM 4075 3255039 - 3255053 + g 77 -10 -3.57561 | overlap 3255033 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA TERM 4076 3255296 - 3255310 + g 73 -4.2 -4.81685 | opp_overlap 3255296 ACCACCAGCGAGTAA CCTGCT TTC AGAAGG TTTTTACTCATTGGT yhaU 3257519 - 3256185 - | putative transport protein TERM 4077 3256819 - 3256833 + g 86 -7 -4.9218 | TTGGGACCGCTTGCT GCCGCG CTG CCCGGC TTTTTGTGGTCCATA TERM 4078 3258750 - 3258772 + G 72 -6.2 -4.4009 | overlap 3258751 AACTGGTTGTCGGCA TGCATTGCGG TGG CAGCGATGCG TTTTCTGGCGTAACG yhaG 3257894 - 3259465 + | putative hydrolase TERM 4079 3259481 - 3259511 + T 73 -10.6 -3.05384 | overlap 3259483 TAATTCAATTCGTAT TATGCCCGATAG CACACGT TTATCGGGCATA TTGAGTCACAGCGAA agaR 3260341 - 3259517 - | DNA-binding transcriptional regulator AgaR TERM 4080 3260896 - 3260874 - g 74 -9.8 -3.53444 | overlap 3260887 CCATCTGGGGCCAAA CCGCTGGCAA AAC CTGCCAGCCG CTCAGGCAATGGCCA agaZ 3260590 - 3261870 + | putative tagatose 6-phosphate kinase 2 agaV 3261857 - 3262366 + | N-acetylgalactosamine-specific PTS system transporter subunit IIB agaW 3262377 - 3263156 + | N-acetylgalactosameine-specific IIC component 2 agaE 3263146 - 3263955 + | putative transport enzyme subunit agaF 3264042 - 3264476 + | putative transport enzyme subunit TERM 4081 3264888 - 3264875 - g 70 -5.2 -4.30987 | ACGCCGCAGAATAAA GGCG CGCATC CGCC GGGTAATGCTGCCAA agaA 3264473 - 3264916 + | N-acetylglucosamine-6-phosphate deacetylase S3388 3264945 - 3265220 + | IS1 orfA S3389 3265139 - 3265642 + | IS1 orfB TERM 4082 3265967 - 3265977 + G 81 -6.8 -4.63592 | TGGGGATTGATTTTT GGCT GGA AGCC TTATTTTTATTCCGC agaC 3265897 - 3266700 + | N-acetylgalactosamine-specific PTS system transporter subunit IIC agaD 3266690 - 3267481 + | N-acetylgalactosamine-specific PTS system transporter subunit IID TERM 4083 3267489 - 3267513 + G 100 -14.3 -3.90856 | opp_overlap 3267488 3267484 3267483 3267491 TTTTGTAAATGGAAC GAGGCACTGCT TCT GGCGGTGCCTC TTTACTTAAGGAATT TERM 4084 3267708 - 3267690 - g 82 -3 -5.24531 | opp_overlap 3267694 ATCTGGTAGAAAAAA TCCACCAG CAG CAGGTTGA TATCAGCCAGCTCAC TERM 4085 3268065 - 3268041 - g 95 -9.9 -4.65168 | overlap 3268042 ATGAGATGTTAAAAA CCACGGGTCGC CCC GTGACTCGTGG GATCACCTTAGGCCT TERM 4086 3268057 - 3268042 - g 72 -10.4 -3.38378 | overlap 3268041 TGAGATGTTAAAAAC CACGGG TCGC CCCGTG ACTCGTGGGATCACC agaI 3267482 - 3268237 + | galactosamine-6-phosphate isomerase S3394 3269249 - 3268746 - | IS1 ORF2 S3395 3269443 - 3269168 - | IS1 orfA TERM 4087 3270007 - 3270036 + H 100 -13.7 -4.50241 | overlap 3270008 ACCGTTAATACGTTA CGGCGTTATCTGA CCTT TCAGATAACGCCC TTTTCCTTCCTCTTT TERM 4088 3270008 - 3270035 + H 100 -17.2 -3.28518 | overlap 3270007 CCGTTAATACGTTAC GGCGTTATCTGA CCTT TCAGATAACGCC CTTTTCCTTCCTCTT TERM 4089 3270239 - 3270226 - g 72 -5.9 -4.41348 | opp_overlap 3270226 CCTGTCGCAAACAAA GGCGC AGAA ACGCC TTATTTACTGCAATC yraI 3270079 - 3270774 + | putative chaperone TERM 4090 3271932 - 3271908 - T 70 -9.2 -3.42605 | overlap 3271906 3271904 GGCATCTAAAATATA GCGCGACCGC TGGAC GCTATCGCGC TGATGCAAACAGTGA S3399 3272961 - 3272539 - | IS2 orfB S3401 3273765 - 3273400 - | insertion sequence 2 OrfA protein TERM 4091 3275088 - 3275067 - g 77 -3 -5.07275 | TCACACAGATAAAAA GCAGCA CCGTATATTC TGCTGC AACCCAAACGGGTGT TERM 4092 3275539 - 3275527 - g 71 -9.1 -3.46117 | overlap 3275518 AGTAGACCAGTACAA CCTGG TCG CCAGG CGAAGAAGTTCAGAC yraK 3274664 - 3275755 + | putative fimbrial protein TERM 4093 3275790 - 3275758 - T 89 -11.5 -4.07885 | gap 1, overlap 3275761 CATGGTGCGGTAAAA GAAGACGTTGCGTT TTGATT AACGCAACG-CTTC GGCACTGTTACCCCT TERM 4094 3275787 - 3275761 - T 73 -7.4 -4.17048 | gap 1, overlap 3275758 GGTGCGGTAAAAGAA GACGTTGCGTT TTGATT AACGCAACG-C TTCGGCACTGTTACC yraL 3276658 - 3275798 - | hypothetical protein TERM 4095 3275859 - 3275875 + g 83 -6.5 -5.00616 | overlap 3275857 3275869 ACGCCATGAATTTCT GCGGC CAGCGCC GCCGC TTTTTTCAGCGGCAG TERM 4096 3276718 - 3276707 - H 86 -3 -5.75945 | ATTGCGTAAAAAAAA TATC ACTG GATA CATTATGGTACCCTC TERM 4097 3276854 - 3276866 + GH 72 -4.7 -4.66537 | overlap 3276847 3276851 GCAGGGCACGGCGCA GGCTG ATT CTGCC TTTTATCTTCAGCAG TERM 4098 3277139 - 3277121 - gH 78 -5.3 -4.79352 | opp_overlap 3277128 3277131, overlap 3277101 3277099 3277097 3277096 CGATTTAGAACAAAA CCAGCAA GCGCG TTACTGG CAGGCAAAAATCGAT yraM 3276723 - 3278759 + | putative glycosylase yraN 3278717 - 3279112 + | hypothetical protein yraO 3279132 - 3279722 + | DnaA initiator-associating protein DiaA yraP 3279732 - 3280307 + | hypothetical protein TERM 4099 3280373 - 3280408 + T 76 -8.2 -4.1899 | opp_overlap 3280385, overlap 3280342 3280375 3280376 CAACGATGCAAACCG TAGGTCGGATAAGGCG TTTA CGCCGCATCCGACATG TTTTCCCTCAAATCA TERM 4100 3280375 - 3280406 + T 72 -8.6 -3.69483 | opp_overlap 3280385, overlap 3280342 3280373 3280376 ACGATGCAAACCGTA GGTCGGATAAGGCG TTTA CGCCGCATCCGACA TGTTTTCCCTCAAAT TERM 4101 3280376 - 3280405 + T 77 -12.1 -2.81208 | opp_overlap 3280385, overlap 3280342 3280375 3280373 CGATGCAAACCGTAG GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATGTTTTCCCTCAAA yraQ 3281461 - 3280421 - | hypothetical protein yraR 3282214 - 3281534 - | hypothetical protein yhbO 3282255 - 3282815 + | hypothetical protein yhbP 3283238 - 3282795 - | hypothetical protein TERM 4102 3283076 - 3283086 + g 74 -8.2 -3.87914 | overlap 3283077 GCGGCCCACTCATCT GCGC GTG GCGC GTTTTTTCTTCCGTC TERM 4103 3283077 - 3283087 + g 100 -8.2 -5.4833 | overlap 3283076 CGGCCCACTCATCTG CGCG TGG CGCG TTTTTTCTTCCGTCA yhbQ 3283289 - 3283591 + | GIY-YIG nuclease superfamily protein yhbS 3284081 - 3283578 - | hypothetical protein yhbT 3284599 - 3284075 - | hypothetical protein TERM 4104 3285214 - 3285236 + G 71 -9 -3.43676 | overlap 3285216 GCCATTTTGACGTTG CCCGCGTGGT GCT GCCGCGCGTG TTGTCGATTCATCAG TERM 4105 3285216 - 3285234 + G 72 -10.2 -3.28814 | overlap 3285214 CATTTTGACGTTGCC CGCGTGGT GCT GCCGCGCG TGTTGTCGATTCATC yhbU 3284808 - 3285803 + | putative collagenase yhbV 3285812 - 3286690 + | hypothetical protein yhbW 3286771 - 3287778 + | hypothetical protein mtr 3289140 - 3287896 - | tryptophan permease TERM 4106 3288246 - 3288230 - G 70 -4.3 -4.48902 | AGATAGTCAAACAAA CCCAGCG TTA CGCCAAG GAACGAACTCGCTAC TERM 4107 3288680 - 3288699 + g 76 -9.3 -3.78775 | opp_overlap 3288678 3288679 GCCCCCAGCACAATC GCCGTCA TGCGGC TGACGGC TTTAGTACTCAACCA TERM 4108 3288766 - 3288749 - G 70 -4 -4.67641 | opp_overlap 3288754 AGTGCAAAACCAAAA CCCGCC GCCCGT GCCGGG ACGTTTAGCGACATC TERM 4109 3289037 - 3289021 - G 74 -2.9 -4.9218 | overlap 3289022 CATTGACCAGAAAAA CCACGCC CCG GACATGA CCACTGGCAGAGAAA TERM 4110 3289113 - 3289086 - G 76 -10.6 -3.28712 | gap 1, opp_overlap 3289085 3289105 TGGTGCCGCCGATAA TCACCA-CGCCGC CAA GCAGCGACGGTGA CGTTTGGGTGGTGGT TERM 4111 3289228 - 3289250 + r 74 -10.6 -3.17888 | opp_overlap 3289228, overlap 3289226 3289224 3289222 AAAGACAGAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT TERM 4112 3289250 - 3289228 - R 100 -10.6 -5.82281 | opp_overlap 3289228 3289226 3289224 3289222 AAAGACAGAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT deaD 3291183 - 3289294 - | ATP-dependent RNA helicase DeaD TERM 4113 3291328 - 3291303 - R 73 -7.5 -4.04023 | overlap 3291304 ATTAACGAACAACAA CGCCCTCACCC GTTA AGGTGATGGCA ATCAAAAAAGATTAC yhbM 3292247 - 3291363 - | lipoprotein NlpI TERM 4114 3292344 - 3292323 - R 100 -15.1 -4.07568 | CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC pnp 3294560 - 3292356 - | polynucleotide phosphorylase/polyadenylase TERM 4115 3294699 - 3294717 + r 77 -7.3 -4.38712 | opp_overlap 3294700, overlap 3294700 CGTCAGCTTGAAAAA AGGGGCC ACTCA GGCCCCC TTTTCTGAAACTCGC TERM 4116 3294716 - 3294700 - R 100 -10.8 -5.03314 | opp_overlap 3294699 3294700 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG TERM 4117 3294700 - 3294716 + r 74 -10.8 -3.22906 | opp_overlap 3294700, overlap 3294699 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG rpsO 3295007 - 3294738 - | 30S ribosomal protein S15 TERM 4118 3294842 - 3294863 + g 85 -2.9 -5.34555 | opp_overlap 3294844, overlap 3294844 3294845 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC truB 3296100 - 3295156 - | tRNA pseudouridine synthase B rbfA 3296501 - 3296100 - | ribosome-binding factor A TERM 4119 3296439 - 3296450 + g 75 -4.4 -4.82855 | overlap 3296431 TTCACGCTGCAGGAT GAGA GCGA TCTC TTTTTGCATTTCCTG TERM 4120 3296524 - 3296538 + r 95 -11.4 -4.68506 | opp_overlap 3296524 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4121 3296538 - 3296524 - R 100 -11.4 -5.24129 | opp_overlap 3296524 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4122 3296652 - 3296613 - R 93 -15 -3.11634 | opp_overlap 3296591 3296627, overlap 3296591 3296590 CGTCACATCAGGCAA TCCATGCCGGATGCGGCG TAAA CGCCTTATCCCGCATGGA ACCCTAAAAACCTTA infB 3299313 - 3296665 - | translation initiation factor IF-2 nusA 3300825 - 3299338 - | transcription elongation factor NusA TERM 4123 3299479 - 3299469 - G 74 -8.2 -3.89346 | opp_overlap 3299474, overlap 3299470 CTTCCAGCGTACAAA CGCC ACG GGCG GCCAGTTTGAATGCC TERM 4124 3299572 - 3299590 + g 82 -7.4 -4.57569 | TTCTTCCTGGGCCTG TGCAATGG TGG CCAGTGCA TTTTTAGCACGCTCG yhbC 3301305 - 3300853 - | hypothetical protein TERM 4125 3301342 - 3301330 - H 93 -6.9 -5.80248 | opp_overlap 3301329 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4126 3301370 - 3301387 + H 71 -6.9 -4.0641 | opp_overlap 3301371, overlap 3301371 GTCAGATAACAAAAA ACCCCGA TAAA TCGGGGC TTTATATAACTGAAC TERM 4127 3301371 - 3301386 + H 73 -10.4 -3.03525 | opp_overlap 3301371, overlap 3301370 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 4128 3301386 - 3301371 - H 100 -10.4 -5.60689 | opp_overlap 3301371 3301370 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA argG 3301936 - 3303279 + | argininosuccinate synthase yhbX 3303769 - 3303287 - | putative alkaline phosphatase I TERM 4129 3305365 - 3305334 - R 100 -14.6 -4.32436 | opp_overlap 3305340, overlap 3305335 3305340 AGACCAGGACCAAAA CGAAAAGAGACGCT TTTC AGCGTCTCTTTTCT GGAATTTGGTACCGA TERM 4130 3305364 - 3305335 - R 100 -18.1 -3.18738 | opp_overlap 3305340, overlap 3305334 3305340 GACCAGGACCAAAAC GAAAAGAGACGCT TTTC AGCGTCTCTTTTC TGGAATTTGGTACCG TERM 4131 3305359 - 3305340 - R 100 -12.2 -4.70319 | opp_overlap 3305340, overlap 3305335 3305334 GGACCAAAACGAAAA GAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 4132 3305340 - 3305359 + r 100 -12.2 -4.44974 | opp_overlap 3305340 3305335 3305334 GGACCAAAACGAAAA GAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 4133 3305497 - 3305519 + r 76 -7.7 -4.32607 | GATATCGCTGGTCGG CTTAGCCGG AGCAG CTGGCTGAG TTTGTTCGGTTTTCG secG 3305805 - 3305473 - | preprotein translocase subunit SecG TERM 4134 3305994 - 3306009 + r 74 -6 -4.60255 | opp_overlap 3305994 3305996, overlap 3305993 TTCGCCGAGAAAAAA GGCGAC AATC GCCGCC TTTTTAGCCAGTTAT TERM 4135 3306006 - 3305994 - R 100 -9.1 -5.24129 | opp_overlap 3305993 3305994, overlap 3305996 TTCGCCGAGAAAAAA GGCGA CAA TCGCC GCCTTTTTAGCCAGT glmM 3307370 - 3306033 - | phosphoglucosamine mutase folP 3308211 - 3307363 - | dihydropteroate synthase TERM 4136 3307817 - 3307806 - G 70 -7.2 -4.0942 | opp_overlap 3307806 TATGCATCAGACAAA CCGG TAAA CCGG TTTCTGCAGCCGCCT TERM 4137 3308265 - 3308246 - R 100 -12.8 -5.56673 | opp_overlap 3308246 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA TERM 4138 3308246 - 3308265 + r 87 -10.6 -4.18494 | opp_overlap 3308246 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA hflB 3310235 - 3308301 - | ATP-dependent metalloprotease TERM 4139 3309308 - 3309287 - G 74 -10.1 -3.42574 | overlap 3309301 GCAAGCCGACCACAA CCTGGCGGT CGAA ACGGCCAGG ACGCAGCAGGGCCGG rrmJ 3310964 - 3310335 - | 23S rRNA methyltransferase J TERM 4140 3310865 - 3310878 + g 76 -3.8 -4.99638 | opp_overlap 3310857 GTTTAAACCAGGCAC GGGA ACGTAA TCCC TTTTTCTGTGCCTGT TERM 4141 3311131 - 3311114 - g 90 -4.9 -5.34309 | gap 1, overlap 3311119 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG yhbY 3311090 - 3311383 + | RNA-binding protein YhbY TERM 4142 3311469 - 3311496 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3311476, overlap 3311476 CACGCTCTGTTCGTT GATAAAAGGCCGC AGA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4143 3311476 - 3311490 + T 100 -12.8 -5.13137 | opp_overlap 3311476, overlap 3311469 TGTTCGTTGATAAAA GGCCGC AGA GCGGCC TTTTTCCTTTCTTTA TERM 4144 3311490 - 3311476 - T 95 -12.8 -4.36914 | opp_overlap 3311476 3311469 TGTTCGTTGATAAAA GGCCGC AGA GCGGCC TTTTTCCTTTCTTTA greA 3312015 - 3311539 - | transcription elongation factor GreA TERM 4145 3311577 - 3311588 + g 72 -7.2 -4.25104 | CTTCAAATTCTACTT CGCC GCCC GGCG TTTTGATGACCACAA TERM 4146 3312148 - 3312117 - H 89 -5.2 -5.68023 | gap 1, overlap 3312119 CCAGAAGCAAAAAAA TA-CCGACCCGGG TACAAGT CCCAGGTCAGCTA CAATTCACATTTTGA TERM 4147 3312145 - 3312119 - H 86 -9.4 -4.46828 | overlap 3312117 AGAAGCAAAAAAATA CCGACCCGGG TACAAGT CCCAGGTCAG CTACAATTCACATTT TERM 4148 3313071 - 3313055 - g 70 -5.8 -4.24326 | AAAGATGAGTTAAAA CAGGCG GGTAT CACCTG GAGCGGAACACTGCT dacB 3312263 - 3313696 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4149 3313730 - 3313704 - T 100 -18.1 -4.71382 | opp_overlap 3313708, overlap 3313708 ACAATTAGTCAAAAA GAAACCCCGGC GCATG GCCGGGGTTTC AGATTATTGACAAAG TERM 4150 3313708 - 3313726 + T 95 -13.1 -3.72051 | opp_overlap 3313704 3313708 TTAGTCAAAAAGAAA CCCCGGC GCATG GCCGGGG TTTCAGATTATTGAC TERM 4151 3313726 - 3313708 - T 100 -13.1 -4.89063 | opp_overlap 3313708, overlap 3313704 TTAGTCAAAAAGAAA CCCCGGC GCATG GCCGGGG TTTCAGATTATTGAC obgE 3315054 - 3313882 - | GTPase ObgE TERM 4152 3314232 - 3314248 + g 72 -7.9 -3.91506 | opp_overlap 3314223 3314222, overlap 3314230 3314234 ACCAACGCGGTTTCG CCGCCAG ATC CTGGCTG TATTTTTCCAGCTCG TERM 4153 3314234 - 3314246 + g 71 -9.1 -3.54256 | opp_overlap 3314223 3314222, overlap 3314232 3314230 CAACGCGGTTTCGCC GCCAG ATC CTGGC TGTATTTTTCCAGCT yhbE 3316035 - 3315070 - | hypothetical protein TERM 4154 3315302 - 3315265 - G 76 -9.1 -3.74198 | gap 1, overlap 3315258 AAAAAACAGCGTAAA CAGTG-GGGTGAGCGTGA TGA TCGCGCTCACCTGCGCTG CCTGCCAGCGAGCCA TERM 4155 3316133 - 3316112 - R 100 -15.9 -4.75174 | opp_overlap 3316112 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG TERM 4156 3316112 - 3316133 + r 100 -15.9 -3.794 | opp_overlap 3316112 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG rpmA 3316419 - 3316162 - | 50S ribosomal protein L27 rplU 3316751 - 3316440 - | 50S ribosomal protein L21 TERM 4157 3317548 - 3317520 - g 70 -5.1 -4.3586 | opp_overlap 3317538 TTATCTATAGCAAAA CCGCGCGTCTG TTTGAGG CTGCCGCGCAG TGTTCCGGGATTCTG TERM 4158 3317696 - 3317686 - g 81 -6.8 -4.67755 | ACAGTTAGGTAAAAA CGTC GGC GACG ATCTGAACGAAGGTA ispB 3317009 - 3317980 + | octaprenyl diphosphate synthase TERM 4159 3317994 - 3318012 + F 90 -16 -2.7386 | AATCCCCTCCCTTCA TCCCGCGC AGT GCGCGGGA TGATTCCAGTAAATT nlp 3318207 - 3318485 + | DNA-binding transcriptional regulator Nlp murA 3319792 - 3318533 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4160 3319290 - 3319312 + g 86 -10.6 -3.92075 | opp_overlap 3319288 GCAGCACACATGATG GTCACCGTTG CGC CAACGCTGAC TTTATCCATCACGAT yrbA 3320116 - 3319847 - | hypothetical protein TERM 4161 3319943 - 3319966 + g 76 -3.8 -5.00884 | CGCAATATATTCCAT CAGCGGGC CATAGACC GTCTGCTG TTTTTTAACCCGACT TERM 4162 3320201 - 3320177 - R 85 -7.2 -5.05712 | gap 1, overlap 3320196 ATAAATAAGCAAAAA GCCTCG-CTGA TAAA TCAGACAAGGC TCGACTTGCAGGCAG yrbB 3320650 - 3320261 - | hypothetical protein yrbC 3321189 - 3320554 - | hypothetical protein TERM 4163 3320712 - 3320725 + gr 70 -4.5 -4.57569 | overlap 3320713 CGTAAGCTTGCCAGT TTCCC GTCT GGGAG TTTTTACGCCACTGG vpsC 3321759 - 3321208 - | cytoplasmic membrane protein TERM 4164 3321713 - 3321694 - G 72 -5.6 -4.46112 | CTTCAGGCAAACAAA CAGCGCCG CCAG CAGTGCTG CTAATAAAAAGATAC vpsB 3322546 - 3321764 - | integral membrane protein vpsA 3323363 - 3322554 - | putative ABC transporter ATP-binding protein YrbF TERM 4165 3324062 - 3324085 + G 90 -7.4 -4.87665 | gap 1 CTTGCAGAGCTGCCG CGTGAC-GGCG GAT TGCCCGTCGCG TTTTTATGGCTCGGC TERM 4166 3324284 - 3324271 - g 72 -6.7 -4.24002 | TCGCAAAGGTGAAAA CGACA TTGC TGTCG GAAATATCATTGGCG TERM 4167 3324399 - 3324410 + G 70 -4.4 -4.47888 | ACTACAGCGTGATGT TGCT GGTG AGCA TTATTTTTGCGTTGC yrbG 3323573 - 3324538 + | putative calcium/sodium:proton antiporter TERM 4168 3325468 - 3325486 + G 84 -11 -3.79138 | ATATCACCTCCGTGA TGGTTGCC GAT GGCGACCA TTTACTCGGTGTGTT yrbH 3324552 - 3325538 + | D-arabinose 5-phosphate isomerase yrbI 3325559 - 3326125 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 4169 3326214 - 3326203 - gf 70 -3.6 -4.59511 | AATATGGCCGAAAAA GACG ATAC CGCC CAGGTGGTCGTCAAC yrbK 3326122 - 3326697 + | hypothetical protein TERM 4170 3327205 - 3327191 - gf 71 -3.4 -4.80417 | overlap 3327192 GACAAAAACAACAAA GGCCAG ACC CCGGCA CAGAAGAAGGGTAAT yhbN 3326666 - 3327223 + | hypothetical protein yhbG 3327230 - 3327955 + | putative ABC transporter ATP-binding protein YhbG rpoN 3328003 - 3329436 + | RNA polymerase factor sigma-54 yhbH 3329459 - 3329746 + | putative sigma(54) modulation protein TERM 4171 3329774 - 3329800 + F 95 -13 -3.93236 | overlap 3329775 TTAGCATGTGCATGG CGGCCTGTTGTG CGG CACAACGGGCCA TTTGTACGGTTAATG TERM 4172 3329775 - 3329799 + F 100 -16.5 -2.95459 | overlap 3329774 TAGCATGTGCATGGC GGCCTGTTGTG CGG CACAACGGGCC ATTTGTACGGTTAAT TERM 4173 3329999 - 3330011 + G 81 -6.9 -4.61231 | overlap 3329995 AAACAACTTAGCCTG CCGCC TCA GGTGG TTTTTGAAGCTATCC ptsN 3329864 - 3330355 + | sugar-specific enzyme IIA component of PTS TERM 4174 3330409 - 3330395 - f 74 -8.6 -3.96148 | CGTTGTGAGGAGAAA CAGTAC ATG GTACTG ATGATCGTCAGCGGA yhbJ 3330401 - 3331255 + | hypothetical protein TERM 4175 3331309 - 3331284 - g 88 -11.1 -4.13654 | overlap 3331287 TGTTGAAATCACAAA CAAGCTGGGCA TGCA TGCCCGGCCTG CAATGAAGCTGTTTG TERM 4176 3331306 - 3331287 - g 82 -9.2 -4.1851 | overlap 3331284 TGAAATCACAAACAA GCTGGGCA TGCA TGCCCGGC CTGCAATGAAGCTGT ptsO 3331252 - 3331524 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4177 3331512 - 3331533 + F 72 -10.3 -2.75963 | overlap 3331511 CTTTAATTCTGGTTT TGATGAAGA TTAA TCTTCATCA CTTTGACATACAACT yrbL 3331737 - 3332369 + | hypothetical protein yhbL 3333743 - 3333090 - | isoprenoid biosynthesis protein TERM 4178 3333953 - 3333975 + r 82 -5.4 -5.19261 | overlap 3333954 3333956 TGGCGCAGTATTCGC GCACCCCGGT CTA GCCGGGGTCA TTTTTTAGTGGCTTT TERM 4179 3333954 - 3333974 + r 76 -8.9 -3.6993 | overlap 3333953 3333956 GGCGCAGTATTCGCG CACCCCGGT CTA GCCGGGGTC ATTTTTTAGTGGCTT TERM 4180 3333956 - 3333972 + r 79 -11.5 -3.41701 | overlap 3333954 3333953 CGCAGTATTCGCGCA CCCCGGT CTA GCCGGGG TCATTTTTTAGTGGC arcB 3336309 - 3333973 - | aerobic respiration control sensor protein ArcB TERM 4181 3334370 - 3334386 + g 70 -6.5 -4.2704 | GTACTCTCCTCATCA TCCTGGG TAT CCCAGAA TTTCTTGATCATCGC TERM 4182 3335706 - 3335730 + g 74 -2.8 -4.92239 | CCGGTGAGTAAACAT CAGCAGGTTT CAGGT GAACCAGTTG TTTTTCGCTTTTTCC yhcC 3337334 - 3336405 - | hypothetical protein TERM 4183 3336778 - 3336751 - G 73 -11.3 -2.60615 | overlap 3336750 3336748 AGCGTTTGCAAACAT TCAGCCTGCCC TTCGCC AGGCAGGCCGA CAATTAAGTGGGAAC TERM 4184 3337633 - 3337649 + H 71 -7.3 -4.0371 | opp_overlap 3337635 AACACGCCTTTATGA CAGTCAG GAA TTGACTG TTTCTCTAACGACTC TERM 4185 3337812 - 3337830 + H 76 -11.8 -2.71918 | overlap 3337811 3337810 3337814 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 4186 3338581 - 3338599 + G 70 -4.5 -4.56961 | gap 1, overlap 3338585 TAAAGGTCTGTGTAT GC-CGGCG GATC TGCCGCGC TTTTATCTGGATCTT TERM 4187 3339186 - 3339173 - g 72 -5.2 -4.58283 | GAAGTGGTCGAAAAA GGCC GCGTCG GGCC AGGCGAACTGATGGT gltB 3337916 - 3342469 + | glutamate synthase subunit alpha TERM 4188 3343256 - 3343234 - g 74 -7.6 -4.07568 | overlap 3343240 CGGCGGGCTGGAAAA CGAAGACGCC GAT GGCGTGTACG CAGCGCTGCCGTTCC gltD 3342482 - 3343900 + | glutamate synthase subunit beta TERM 4189 3344410 - 3344388 - f 100 -16.4 -3.6106 | overlap 3344399 TTCAACATGTTGAAA TTCGCCAGAC AGT GTCTGGCGAA TTAACACCATTGGGA TERM 4190 3344461 - 3344415 - f 100 -16 -3.33696 | overlap 3344399 3344417 TGTCTGGCGAATTAA CACCATTGGGAATTCCGCAGAC ACC ATCTGCAGAATTCCCATCGGCA AAGATTTGGCAGACG TERM 4191 3344459 - 3344417 - f 100 -18.6 -3.23853 | overlap 3344399 3344415 TCTGGCGAATTAACA CCATTGGGAATTCCGCAGAC ACC ATCTGCAGAATTCCCATCGG CAAAGATTTGGCAGA TERM 4192 3344490 - 3344464 - f 88 -12.4 -3.57263 | overlap 3344466 ATTCCCATCGGCAAA GATTTGGCAGAC GCT GTCTGCCAAATT GAGAGGCTGTTTGAT TERM 4193 3344488 - 3344466 - f 100 -15 -3.36515 | overlap 3344464 TCCCATCGGCAAAGA TTTGGCAGAC GCT GTCTGCCAAA TTGAGAGGCTGTTTG S3473 3345046 - 3346116 + | IS600 orf yhcH 3346656 - 3346192 - | hypothetical protein yhcI 3347528 - 3346653 - | N-acetylmannosamine kinase yhcJ 3348214 - 3347525 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 4194 3348254 - 3348235 - R 72 -10.7 -2.78679 | overlap 3348234 TTCCCTTAGCGAAAG GCCCGGT ACATAG ACCGGGC AACAGGATTAACTTT nanT 3349752 - 3348262 - | putative sialic acid transporter TERM 4195 3349765 - 3349786 + r 95 -12.3 -3.8377 | gap 1 CATTGTGAGTCTCCC GCG-GTGGGC GAT GCCCACACGC TTTGGTATGAAAATT TERM 4196 3349864 - 3349814 - R 74 -11.2 -2.89683 | opp_overlap 3349844 3349846 ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAACAACTCA CCCGCGCTCTTGCAT nanA 3350755 - 3349862 - | N-acetylneuraminate lyase yhcK 3351659 - 3350877 - | transcriptional regulator NanR S3480 3352106 - 3352381 + | IS1 orfA S3481 3352300 - 3352803 + | IS1 orfB TERM 4197 3353501 - 3353490 - g 82 -3 -5.24129 | GCTTTTGACAAAAAA GATA AAAA TATC AATCACGAACAGGCA TERM 4198 3354096 - 3354106 + G 78 -8.2 -4.15565 | ACGTCAGGAATTGCA GGCG TTT CGCC TTTTGCGGTGGTGAA yhcL 3352824 - 3354191 + | putative cryptic C4-dicarboxylate transporter DcuD TERM 4199 3354233 - 3354203 - T 100 -12.7 -4.77157 | opp_overlap 3354203 3354205 3354210, overlap 3354205 3354210 TTAAGTCATTAAAAA GACAAAACAGGCC GCCTG GGCCTGTTTTGTA TTACTTCACAACGCG TERM 4200 3354203 - 3354233 + T 85 -12.7 -3.33696 | opp_overlap 3354203 3354205 3354210, overlap 3354205 3354210 TTAAGTCATTAAAAA GACAAAACAGGCC GCCTG GGCCTGTTTTGTA TTACTTCACAACGCG TERM 4201 3354231 - 3354205 - T 100 -15.3 -3.9993 | opp_overlap 3354203 3354205 3354210, overlap 3354203 3354210 AAGTCATTAAAAAGA CAAAACAGGCC GCCTG GGCCTGTTTTG TATTACTTCACAACG TERM 4202 3354205 - 3354231 + T 100 -15.3 -3.23853 | opp_overlap 3354205 3354203 3354210, overlap 3354203 3354210 AAGTCATTAAAAAGA CAAAACAGGCC GCCTG GGCCTGTTTTG TATTACTTCACAACG TERM 4203 3354210 - 3354226 + T 93 -9.4 -4.73864 | opp_overlap 3354210 3354205 3354203, overlap 3354205 3354203 ATTAAAAAGACAAAA CAGGCC GCCTG GGCCTG TTTTGTATTACTTCA TERM 4204 3354226 - 3354210 - T 100 -9.4 -5.00027 | opp_overlap 3354205 3354203 3354210, overlap 3354205 3354203 ATTAAAAAGACAAAA CAGGCC GCCTG GGCCTG TTTTGTATTACTTCA sspB 3354731 - 3354234 - | ClpXP protease specificity-enhancing factor sspA 3355375 - 3354737 - | stringent starvation protein A TERM 4205 3355718 - 3355731 + r 100 -9.5 -5.03145 | opp_overlap 3355718 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG TERM 4206 3355731 - 3355718 - R 100 -9.5 -5.64274 | opp_overlap 3355718 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG rpsI 3356162 - 3355770 - | 30S ribosomal protein S9 rplM 3356606 - 3356178 - | 50S ribosomal protein L13 TERM 4207 3356468 - 3356483 + g 70 -6.8 -4.05446 | CACCGGTATCTACGT GCGGAG TATA TTCCGC TTTGTGCTTACCGCG TERM 4208 3356784 - 3356802 + r 100 -8.8 -5.06735 | opp_overlap 3356782 GATTATAGAGAAGTC GGGGTCAA AGA TCGACCCC TTTTTGTGATTTGTG yhcM 3357952 - 3356825 - | hypothetical protein TERM 4209 3358407 - 3358384 - g 100 -11 -4.65168 | opp_overlap 3358384 AGCACATGGCAAAAA GCTCCAGCAG CCTG CTGCCGGAAC TGTCTGCTGAAGCAA yhcB 3358146 - 3358544 + | cytochrome d ubiquinol oxidase subunit III TERM 4210 3358555 - 3358573 + F 79 -12.4 -2.83517 | ACTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTCTCCCT TERM 4211 3360055 - 3360084 + F 73 -10.7 -3.11192 | opp_overlap 3360055 CGTTAATGTCGTAAA CCGGGCATCAGGC TGAC GTGTGATGTCCGG TTAACTCGTGGTATG TERM 4212 3360902 - 3360875 - g 78 -10.6 -3.42124 | gap 1, opp_overlap 3360889, overlap 3360869 CAAAATTATGGATAA GCTGATC-CGCGA TGG TCGCGTGATCCGC GGCTACATTGGTATC degS 3360135 - 3361202 + | serine endoprotease TERM 4213 3361247 - 3361218 - T 79 -9.4 -4.09685 | opp_overlap 3361224, overlap 3361224 GTCGAGTGCTCAAAA CAAAAACCGGAG TCTGTG CTCCGGTTTTTT ATTATTCGCTAATCA TERM 4214 3361241 - 3361224 - T 100 -8.4 -5.45802 | opp_overlap 3361224, overlap 3361218 TGCTCAAAACAAAAA CCGGAG TCTGTG CTCCGG TTTTTTATTATTCGC TERM 4215 3361224 - 3361241 + T 100 -9.1 -5.64873 | opp_overlap 3361224 3361218 TGCTCAAAACAAAAA CCGGAGT CTGT GCTCCGG TTTTTTATTATTCGC mdh 3362202 - 3361264 - | malate dehydrogenase argR 3362637 - 3363107 + | arginine repressor TERM 4216 3363110 - 3363140 + F 73 -9.6 -3.30039 | overlap 3363109 3363134 CCAGGAGCTTTAATC TCTGCCCCGTCGCT TCT GGCGGCGGGGAAAA TGTTGCTTATCCCTC TERM 4217 3363258 - 3363248 - f 82 -3.2 -5.45726 | CATACGGTAAAAAAA GCAC ATT ATGC AAAATTCATTATCTA yhcN 3363421 - 3363735 + | hypothetical protein TERM 4218 3363763 - 3363779 + T 100 -9.3 -5.78622 | opp_overlap 3363761 TTGTCCGACGATATT GCCCCCG GTT CGTGGGC TTTTTTTTGCGCTAA yhcO 3364063 - 3363791 - | hypothetical protein TERM 4219 3364129 - 3364147 + r 95 -12.4 -4.29176 | opp_overlap 3364129 ATAGCCATGAAAAAA CCGACGCT TTT GGCGTCGG TTTTGACTTAACTAT TERM 4220 3364147 - 3364129 - R 100 -11.7 -5.17353 | opp_overlap 3364129 ATAGCCATGAAAAAA CCGACGC TTTTG GCGTCGG TTTTGACTTAACTAT yhcP 3366122 - 3364155 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 3367060 - 3366128 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4221 3366833 - 3366847 + g 76 -4.2 -5.0133 | CGGCTGGTCGATGGT GAACAG TAT CTGTCC TTTTTTCACCAGCTG yhcR 3367271 - 3367068 - | hypothetical protein yhcS 3367472 - 3368383 + | putative DNA-binding transcriptional regulator tldD 3369956 - 3368511 - | protease TldD TERM 4222 3369366 - 3369337 - G 74 -6.3 -4.50661 | gap 1, opp_overlap 3369353 AACTCATAACCAAAA CGACCGCCGCCGCC ACT GGC-ACCGCGTTCG CGTTTGCCATCTTCT TERM 4223 3369440 - 3369404 - G 81 -10.8 -3.65827 | gap 1 GAACGCTCACGGAAA GACGCACCAGCGGACGG ACAT CCG-CCGCTAGCGTGCC GTCGGTGGCCGCAAC yhdP 3373072 - 3370112 - | hypothetical protein TERM 4224 3370730 - 3370741 + g 74 -5.8 -4.54727 | opp_overlap 3370711 GGCGGCATCAATTTT CTGC CCAC GCAG TTTTCCTTTCAGCGA cafA 3375449 - 3373980 - | ribonuclease G maf 3376032 - 3375439 - | Maf-like protein mreD 3376529 - 3376041 - | rod shape-determining protein MreD mreC 3377632 - 3376736 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4225 3377309 - 3377338 + g 76 -7.7 -4.27117 | opp_overlap 3377311, overlap 3377317 ACGCAGCGGGGAACC CAGCAGCTCGCGC AGAC GCGCGTTCTCCTG TTTGTATTGTCCAAG TERM 4226 3377317 - 3377330 + g 73 -9.5 -3.59627 | opp_overlap 3377311, overlap 3377309 GGGAACCCAGCAGCT CGCGC AGAC GCGCG TTCTCCTGTTTGTAT TERM 4227 3377691 - 3377658 - R 77 -11.7 -2.78596 | opp_overlap 3377653, overlap 3377661 TATTCTCGTATCAGA CCAGGCAGGGTAAAC AGAC GCTTCCCCTGCCTGC ATCCGATTACTCTTC TERM 4228 3377688 - 3377661 - R 76 -12 -2.66316 | opp_overlap 3377653, overlap 3377658 TCTCGTATCAGACCA GGCAGGGTAAAC AGAC GCTTCCCCTGCC TGCATCCGATTACTC mreB 3378801 - 3377698 - | regulator of ftsI, penicillin binding protein 3 TERM 4229 3378493 - 3378510 + g 74 -8.3 -3.90291 | opp_overlap 3378493, overlap 3378495 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4230 3378510 - 3378493 - G 72 -8.3 -3.73647 | opp_overlap 3378493 3378495 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4231 3378495 - 3378508 + g 71 -9.5 -3.54146 | opp_overlap 3378493, overlap 3378493 CAGTCACGAAGAAGT CGGCG ATAA CGCCG TCTTTCATTGGGCGA yhdA 3380986 - 3379046 - | regulatory protein CsrD TERM 4232 3379764 - 3379747 - G 72 -8.3 -3.85698 | CCGGTTTTTGATAAA GGCGCGG GCCG CCGCGAC TGAGCATTTGCTCGA TERM 4233 3381847 - 3381899 + G 70 -5.7 -4.33819 | gap 3, overlap 3381840 ATTACGGCGGCTGCG TGGCG-GCCTGTGGTCTGGC-GGGTG GTTT TACTCTGCCA-ACCACGGTCATGCCA TTTATTCTGCGTAAT yhdH 3381138 - 3382112 + | putative dehydrogenase S3509 3382271 - 3382170 - | hypothetical protein accB 3383090 - 3383560 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4234 3384065 - 3384048 - g 72 -8.3 -3.78775 | CCGGTGATTATCAAA GCCTCCG GCGG CGGCGGC GGTCGCGGTATGCGC TERM 4235 3384522 - 3384504 - g 74 -8 -4.00756 | GACCTGATCAAAGAA CAGCTGCG TAT CGCTGCCG GTCAACCGCTGTCGA accC 3383571 - 3384920 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4236 3384956 - 3384940 - f 100 -13.7 -4.19276 | opp_overlap 3384940 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG TERM 4237 3384940 - 3384956 + F 100 -13.7 -5.5112 | opp_overlap 3384940 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG yhdT 3385029 - 3385271 + | hypothetical protein panF 3385261 - 3386712 + | sodium/panthothenate symporter TERM 4238 3386787 - 3386815 + G 77 -8.9 -4.11216 | opp_overlap 3386752 3386796, overlap 3386788 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 4239 3386788 - 3386814 + G 79 -12.4 -3.06515 | opp_overlap 3386752 3386796, overlap 3386787 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3386724 - 3387605 + | ribosomal protein L11 methyltransferase TERM 4240 3387699 - 3387659 - f 90 -9.9 -4.43189 | opp_overlap 3387657 AGCAAGCTCACAAAA GGCACGTAAATTTGC CGATTATTTAC GCAAATTTGCGTGCC AAAATTTTCATTCAT TERM 4241 3387739 - 3387724 - f 81 -3.3 -5.38958 | opp_overlap 3387724 3387733, overlap 3387735 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTTGAGTGTA TERM 4242 3387899 - 3387885 - f 76 -4.2 -5.00884 | overlap 3387886 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG yhdG 3388057 - 3388899 + | putative dehydrogenase fis 3388925 - 3389221 + | DNA-binding protein Fis TERM 4243 3389251 - 3389276 + F 100 -8.2 -5.29782 | opp_overlap 3389251 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4244 3389276 - 3389251 - f 74 -6 -4.7254 | opp_overlap 3389251 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4245 3390142 - 3390128 - g 88 -5.6 -5.21683 | AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCCGGTT yhdJ 3389307 - 3390191 + | putative methyltransferase S3519 3390972 - 3390469 - | IS1 orfB S3520 3391166 - 3390891 - | IS1 orfA TERM 4246 3391367 - 3391351 - H 87 -9.5 -4.27259 | opp_overlap 3391353, overlap 3391364 CACAGACAGGTAAAA GACGTTT CCC AAACGTC CTATAACGATAATTT yhdW 3391510 - 3392427 + | putative periplasmic binding transport protein TERM 4247 3392444 - 3392465 + T 85 -13.7 -3.07233 | opp_overlap 3392443 3392446, overlap 3392446 3392461 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC TERM 4248 3392446 - 3392463 + T 73 -10.5 -3.09135 | opp_overlap 3392446 3392443, overlap 3392444 3392461 GGTGTGAGGTAACGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT TERM 4249 3393002 - 3393026 + T 74 -7.1 -4.30933 | TCGTGGGCTTTATAT TCCGTCACC GCAGCTG GGAGACGGA TTTATTGCGTTTATG S3523 3393559 - 3393056 - | IS1 orfB S3524 3393753 - 3393478 - | IS1 orfA TERM 4250 3395470 - 3395482 + G 73 -4.1 -4.87803 | TGTTTTCGCCGCGCT GATCT ACT GGATC TTTTGTTTCAGCATG yhdY 3394451 - 3395554 + | putative transport system permease protein yhdZ 3395562 - 3396320 + | putative ATP-binding component of a transport system TERM 4251 3396347 - 3396366 + F 100 -13.6 -3.83214 | opp_overlap 3396347, overlap 3396336 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4252 3396366 - 3396347 - f 100 -13.6 -5.0925 | opp_overlap 3396347 3396336 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4253 3396758 - 3396779 + F 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4254 3399247 - 3399259 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4255 3399801 - 3399825 + F 71 -8 -3.93061 | gap 1, opp_overlap 3399807 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4256 3399864 - 3399901 + F 93 -6.3 -5.68438 | opp_overlap 3399860 3399866, overlap 3399866 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4257 3399866 - 3399899 + F 86 -8.9 -4.47052 | opp_overlap 3399860 3399866, overlap 3399864 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4258 3399899 - 3399866 - f 75 -6.7 -4.49756 | opp_overlap 3399866 3399864, overlap 3399860 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4259 3401909 - 3401921 + F 71 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4260 3401941 - 3401955 + F 86 -4.2 -5.50925 | opp_overlap 3401941, overlap 3401930 3401942 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTTCTCTTCGTT TERM 4261 3401942 - 3401954 + F 71 -7.7 -3.88115 | opp_overlap 3401941, overlap 3401930 3401941 TCTTTCAGAGTCAAC CCTGA ATT TCAGG ATTTTTTCTCTTCGT yrdA 3401985 - 3402755 + | putative transferase yrdB 3402988 - 3402731 - | hypothetical protein aroE 3403803 - 3402985 - | shikimate 5-dehydrogenase yrdC 3404380 - 3403808 - | putative ribosome maturation factor yrdD 3404903 - 3404385 - | putative DNA topoisomerase TERM 4262 3404440 - 3404430 - G 70 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 4263 3404801 - 3404765 - G 89 -13.1 -3.34233 | overlap 3404768 3404794 CCAGAACTTTGACAA TATGTCCATCCGCTGAA GAT TTCAGAGGACGGACGTA GTCACACGCCGGATA TERM 4264 3404798 - 3404768 - G 89 -14.8 -2.53747 | overlap 3404765 3404794 GAACTTTGACAATAT GTCCATCCGCTGAA GAT TTCAGAGGACGGAC GTAGTCACACGCCGG smg 3405414 - 3404956 - | hypothetical protein TERM 4265 3405264 - 3405282 + g 74 -6 -4.57569 | TCGGTTCTGCCAACC CTTCCTGA TAA TCAGCAAG TTTTTCCAGCCATAG smf 3406525 - 3405401 - | hypothetical protein TERM 4266 3405984 - 3405970 - G 72 -10 -3.34715 | overlap 3405951 3405968 CACCCTGTTCAAACA GACTGG CAG CCAGTC GGGCATGGCGACGCG def 3406690 - 3407199 + | peptide deformylase TERM 4267 3407260 - 3407282 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 4268 3407362 - 3407352 - g 74 -3.2 -5.02074 | overlap 3407356 GGACGCGGTAAAAAA CTGA TGC CCAG CCCGATTAAAGTTCT TERM 4269 3407445 - 3407435 - g 85 -6.8 -4.77165 | overlap 3407436 GCGTCCACAAGAAAA CCAG CAA CTGG TCGCCGATTTGCAGG fmt 3407214 - 3408161 + | methionyl-tRNA formyltransferase TERM 4270 3408177 - 3408195 + F 70 -2.2 -5.01535 | overlap 3408178 TAGTCCACTCTTCTA AGCCCGGT CTT GCCGAGCA TTTTTATACTTATGA TERM 4271 3408232 - 3408216 - g 88 -5.1 -5.17353 | overlap 3408219 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCCCAGGC TERM 4272 3408229 - 3408219 - g 75 -5.4 -4.67552 | overlap 3408216 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCCCA TERM 4273 3408355 - 3408369 + G 77 -10 -3.60971 | opp_overlap 3408324 AAGAGTTGTGCTTTG GCGTAC TGC GTACGC TTTCGCAGTTAGACT TERM 4274 3409453 - 3409439 - g 73 -3.5 -4.87133 | opp_overlap 3409449 ACCGGGTAAACAAAA TCAGC CTGGT GCCGA AGAGGGCGACGGCTT sun 3408207 - 3409496 + | 16S rRNA methyltransferase B TERM 4275 3410219 - 3410208 - g 77 -5.8 -4.62783 | CAGCGACTGGAAAAA CCGT ATAA ACGG ATCATGCTGGTTGGT trkA 3409518 - 3410894 + | potassium transporter peripheral membrane component TERM 4276 3410896 - 3410923 + F 100 -15.8 -3.89938 | opp_overlap 3410899 3410902, overlap 3410899 3410902 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT TERM 4277 3410899 - 3410920 + F 95 -13.1 -4.05629 | opp_overlap 3410899 3410902, overlap 3410896 3410902 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4278 3410920 - 3410899 - f 86 -13.1 -3.33696 | opp_overlap 3410896 3410899 3410902, overlap 3410902 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4279 3410902 - 3410917 + F 87 -10.4 -4.13254 | opp_overlap 3410899 3410902, overlap 3410899 3410896 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4280 3410917 - 3410902 - f 83 -10.4 -3.81146 | opp_overlap 3410902 3410899 3410896, overlap 3410899 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4281 3411071 - 3411044 - f 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 4282 3411411 - 3411423 + G 73 -9.1 -3.62046 | opp_overlap 3411404 GCTAAGCAGGCATTA CAGCC TGG GGCTG TTGTTGCCCGGATCG S3547 3411075 - 3411749 + | ISSfl3 orfA S3548 3411746 - 3412096 + | ISSfl3 orfB TERM 4283 3412324 - 3412287 - g 70 -6.2 -4.1585 | overlap 3412288 3412292 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 4284 3412346 - 3412329 - g 82 -9.1 -4.19238 | overlap 3412342 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA S3549 3412093 - 3413694 + | ISSfl3 orfC lysC 3415209 - 3413860 - | aspartate kinase III TERM 4285 3414241 - 3414228 - G 70 -6.7 -4.12188 | CGAGGATGCCGAAAA CTTCC GCGA GGAAG CCGCGAGAATGCAGC TERM 4286 3414625 - 3414639 + g 70 -4.2 -4.68908 | overlap 3414617 3414626 GCCTCCACGGCCAAG CGTCGT TGT ACGACC TTTATTTTCGCTACC TERM 4287 3415810 - 3415843 + G 100 -14.8 -4.93318 | gap 1, opp_overlap 3415806 3415803 AAATGAAAGACGTTA CGATCGCCGATCTTT TTGCT AAAGA-CGGCGATCG TTTTTCTAAGTTCTC pgi 3415734 - 3417383 + | glucose-6-phosphate isomerase TERM 4288 3417532 - 3417508 - f 100 -14.4 -4.7153 | opp_overlap 3417508 AAATAACCTTAAAAA CAATGCCGAC AATAA GTCGGCATTG TTTTATCAGATAAAT TERM 4289 3417508 - 3417532 + F 100 -14.4 -4.40358 | opp_overlap 3417508 AAATAACCTTAAAAA CAATGCCGAC AATAA GTCGGCATTG TTTTATCAGATAAAT yjbE 3417846 - 3418088 + | hypothetical protein TERM 4290 3418157 - 3418178 + F 82 -11.7 -3.32343 | opp_overlap 3418160, overlap 3418160 TGAAGGGATTTACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 4291 3418160 - 3418175 + F 76 -9 -3.80174 | opp_overlap 3418160, overlap 3418157 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT TERM 4292 3418175 - 3418160 - f 70 -9 -3.42699 | opp_overlap 3418160 3418157 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT yjbF 3418172 - 3418840 + | hypothetical protein yjbG 3418837 - 3419574 + | hypothetical protein yjbH 3419574 - 3421670 + | hypothetical protein TERM 4293 3422047 - 3422062 + F 78 -5.4 -4.74103 | GCTGGTGGCTGGGAA TCACCT GAAT GGGTGA TTTTTGAATTACCGG yjbA 3422265 - 3422675 + | phosphate-starvation-inducible protein PsiE TERM 4294 3422710 - 3422679 - T 82 -7.2 -4.73388 | overlap 3422681 AAGCGGGAGTAAAAA GACAGCACGCCG AAATGGCG CGGCGTGCTGGA CAGGAAGATTACAGC TERM 4295 3422708 - 3422681 - T 100 -14.2 -3.98256 | overlap 3422679 GCGGGAGTAAAAAGA CAGCACGCCG AAATGGCG CGGCGTGCTG GACAGGAAGATTACA xylE 3424194 - 3422719 - | D-xylose transporter XylE TERM 4296 3423264 - 3423278 + g 74 -7.8 -4.11484 | opp_overlap 3423252, overlap 3423265 ACAGCGCGATATCCG TGCTGG CCC CCAGCG TTTTGAACACTTCCG TERM 4297 3423665 - 3423647 - G 91 -9 -4.65747 | GAACGGGCAATAAAA TAGTTTAC GCA GTAAACTA AAAGTTGCCCGAAAA TERM 4298 3424494 - 3424477 - R 100 -12.7 -5.99154 | GACGAAAGAAAAAAA GGCGCTC CGTG GAGCGCC GAATAATAGTCACAA malG 3425455 - 3424565 - | maltose transporter permease malF 3427014 - 3425470 - | maltose transporter membrane protein malE 3428358 - 3427168 - | maltose ABC transporter periplasmic protein TERM 4299 3429160 - 3429184 + G 75 -4.4 -4.7497 | gap 2 CGTGGCGATTGGCCG TACGCTGGTGGC CGA GCCA--AGCGTA TTTTTGCTCGATGAA TERM 4300 3429394 - 3429418 + G 72 -7.9 -3.97368 | gap 1 GGAACTGTACCACTA TCCGGCAGAC CGTTTT GTC-GCCGGA TTTATCGGTTCGCCA malK 3428723 - 3429838 + | maltose/maltodextrin transporter ATP-binding protein lamB 3429913 - 3431250 + | maltoporin TERM 4301 3431298 - 3431259 - f 77 -7 -4.4261 | overlap 3431260 3431261 3431273 3431274 GTGGTAATAGCAAAA CCTGGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATAAA AACAGGTTGTCATTA TERM 4302 3431321 - 3431334 + F 70 -9.5 -2.97017 | opp_overlap 3431321, overlap 3431316 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT TERM 4303 3431334 - 3431321 - f 75 -9.5 -3.62096 | opp_overlap 3431321 3431316 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT malM 3431402 - 3432322 + | maltose regulon periplasmic protein TERM 4304 3432355 - 3432374 + F 100 -11.4 -5.71983 | opp_overlap 3432354 3432353 GATTTTGCAACAACT GGTGCGTC TCCT GGCGCACC TTTTTTTATGCTTCC TERM 4305 3432689 - 3432703 + F 74 -5.8 -4.70659 | AGAGATTACTTTATT TATATC AGT GATATA TTTTTAAATATAAAA TERM 4306 3433503 - 3433470 - f 73 -4 -4.88407 | TGATGCAATTAAAAA TTCTCAATATTGTT AATAAA AACTTTATTGAGAA TATGAAGAAAACATT ubiC 3434354 - 3434851 + | chorismate pyruvate lyase ubiA 3434864 - 3435736 + | 4-hydroxybenzoate octaprenyltransferase TERM 4307 3435749 - 3435766 + T 91 -11.3 -4.35604 | opp_overlap 3435749 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGTTGC TERM 4308 3435766 - 3435749 - T 100 -11.3 -5.1101 | opp_overlap 3435749 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGTTGC TERM 4309 3435790 - 3435822 + T 72 -6.2 -4.29326 | GGGTTGCCTGATGCG TTGCGCTTCTCAGG CCTAC CCGGTGAATCGCAA TTTATTGAATTTGCA plsB 3438314 - 3435891 - | glycerol-3-phosphate acyltransferase dgkA 3438485 - 3438853 + | diacylglycerol kinase lexA 3438963 - 3439571 + | LexA repressor TERM 4310 3439585 - 3439608 + F 100 -16 -4.94262 | AACATATCTCTGAGA CCGCGATGCC GCTT GGCGTCGCGG TTTGTTTTTCATCTC dinF 3439644 - 3440969 + | DNA-damage-inducible SOS response protein TERM 4311 3441061 - 3441042 - f 73 -4.3 -4.77567 | opp_overlap 3441028 ACGTTCAGAAGAAAA GTGAACG TACTCT CATTCAC AACCTAACGATGAGG yjbJ 3441085 - 3441294 + | putative stress-response protein yjbK 3441851 - 3441336 - | zinc uptake transcriptional repressor TERM 4312 3441733 - 3441721 - G 71 -9.1 -3.49858 | TCAAGCAGATCATAA GCGCT GAT AGCGC CATCCTGCAGACTCA yjbM 3442447 - 3443154 + | hypothetical protein TERM 4313 3443196 - 3443217 + F 100 -9.5 -5.4251 | opp_overlap 3443196 3443199 AGGCATTATATAAAA GGACCCAAT ATTT ATTGGGTTC TTTTTTCTCTATCAA TERM 4314 3443217 - 3443196 - f 80 -7.3 -4.57755 | opp_overlap 3443196, overlap 3443199 AGGCATTATATAAAA GGACCCAAT ATTT ATTGGGTTC TTTTTTCTCTATCAA TERM 4315 3443373 - 3443387 + F 85 -7.2 -5.09259 | TGAGAGCTTCATGCC TTGAGA GGA TCTCAA TTTTCTTTTGCAATG yjbN 3443535 - 3444554 + | tRNA-dihydrouridine synthase A TERM 4316 3444585 - 3444608 + F 100 -13.1 -4.43681 | opp_overlap 3444582 3444579 TAGTCAAATTCACCA CGCCCTGCG CACCGT CGCGGGGCG TTTTGCTGTTAAATC pspG 3444688 - 3444930 + | phage shock protein G TERM 4317 3445065 - 3445089 + T 100 -10 -4.77775 | opp_overlap 3445067, overlap 3445067 CGAACTATAAAAAGA AAGGGCTTCC CAGGT GGAAGCCCTA TTTCTTTTATGGAAT TERM 4318 3445067 - 3445087 + T 95 -12.6 -3.99938 | opp_overlap 3445067, overlap 3445065 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA TERM 4319 3445087 - 3445067 - T 100 -12.6 -5.00267 | opp_overlap 3445067 3445065 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA qor 3446079 - 3445096 - | quinone oxidoreductase, NADPH-dependent TERM 4320 3445538 - 3445548 + g 88 -8.2 -4.59853 | overlap 3445537 3445543 GCGCCGGCTTTTAGC GCGC TCT GCGC TTTTTGCGCGGTTCC TERM 4321 3446514 - 3446497 - g 77 -3.3 -5.02476 | overlap 3446499 AGAGCTGTCAAAAAA TACGCCA AGTG CGGCGAA CATCAGTGCTTATGC TERM 4322 3446834 - 3446814 - g 100 -6.7 -5.80364 | opp_overlap 3446813 3446814 ATCTCAACAAAAAAA CCGCTGGCT TGC AGCCGTCGG ATTTGATCATCGTCG TERM 4323 3447510 - 3447485 - g 74 -8.9 -3.9281 | ATTATCGGTAAACAA CGTAACGGCCC AATC GGGACGGTACG CCTGACCTTTAACGG dnaB 3446162 - 3447577 + | replicative DNA helicase alr 3447630 - 3448709 + | alanine racemase TERM 4324 3449133 - 3449154 + G 72 -6.5 -4.42806 | gap 1 GAAGCGCGCCTGAAT GCGCAGC-CC CAT GGCGCTTCGC TTTATTTACCGATGG tyrB 3448962 - 3450155 + | aromatic amino acid aminotransferase TERM 4325 3450188 - 3450165 - f 100 -14.6 -3.79668 | ATGTAATGCAGGAAA GCAGGCTGGA GTTA CCCAGCCTGC AGTGAAATTAAACTG TERM 4326 3451538 - 3451523 - g 86 -4 -5.40072 | GGCGCGGCAAAAAAA CCTTCT CGCC AGAAAG CGAAGATTATCTGAA aphA 3451264 - 3451977 + | acid phosphatase/phosphotransferase yjbQ 3452088 - 3452504 + | hypothetical protein TERM 4327 3452676 - 3452662 - g 74 -7.8 -4.07568 | overlap 3452665 CTGTTTCGCTGAAAA CCAGCC CGG AGCTGG CGGAGCTGCTACGTC yjbR 3452508 - 3452864 + | hypothetical protein TERM 4328 3452891 - 3452873 - T 100 -12.4 -4.55128 | overlap 3452860 ACTCTGAAAGGAAAA GGCCGCTC AGA AAGCGGCC TTAACGATTACAGCA uvrA 3455721 - 3452899 - | excinuclease ABC subunit A ssb 3455975 - 3456511 + | single-strand DNA-binding protein TERM 4329 3456603 - 3456581 - T 100 -13.5 -5.28176 | opp_overlap 3456584 GCCAGCCATAAAAAA GAAGCCTCC GTTAT GGAGGCTTC GGTAATGACTCCAAC TERM 4330 3456584 - 3456600 + T 70 -10.1 -3.10164 | opp_overlap 3456581 AGCCATAAAAAAGAA GCCTCCG TTA TGGAGGC TTCGGTAATGACTCC S3585 3457122 - 3456619 - | IS1 orfB S3586 3457316 - 3457041 - | IS1 orfA yjcB 3457736 - 3457386 - | hypothetical protein TERM 4331 3457790 - 3457770 - R 79 -4.1 -5.1523 | opp_overlap 3457770 TGCAGAACACAAAAA TGAAACA CTCTGTT TGTTTCA TTAATTTTGTGAACT TERM 4332 3458488 - 3458498 + r 76 -2.4 -5.38047 | TCTATCTATTATTAC CGCG ATA CGCC TTTTTTCTCTGGCTA TERM 4333 3459172 - 3459182 + r 74 -6.8 -4.2828 | GTTTCTATTAACCTG TCGG CCT CCGA TTTTCATACGTCACG TERM 4334 3459670 - 3459641 - R 83 -12.9 -3.19389 | CAATGGATGGAGCAA TTACCCGCGCG GGAGTTAA CGCGCGGGCAA TAAAACTACAGGCGG soxS 3459999 - 3459676 - | DNA-binding transcriptional regulator SoxS TERM 4335 3460298 - 3460269 - g 70 -5.7 -4.3534 | gap 1 TCGCAATTATCAAAA TCGCTCAGCGTATT GGC ATTCCGCTG-GCGA CCATTGGTGAAGCGT soxR 3460085 - 3460549 + | redox-sensing activator of soxS TERM 4336 3460729 - 3460705 - f 100 -14.4 -4.78848 | opp_overlap 3460705 TCCGCAAACACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 4337 3460705 - 3460729 + F 100 -14.4 -4.67651 | opp_overlap 3460705 TCCGCAAACACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 4338 3461427 - 3461411 - g 71 -9.4 -3.53811 | opp_overlap 3461420 GGTATGTTGGGTAAA GCAGGC TTCCC GCCTGC GGCAGTTTTCGTTGC yjcD 3461255 - 3462604 + | hypothetical protein TERM 4339 3462620 - 3462651 + F 100 -12.4 -4.37658 | opp_overlap 3462626, overlap 3462626 TCTTTCATCGGATTC TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA TTTTCTCCGCACATT TERM 4340 3462626 - 3462645 + F 100 -9.2 -5.54907 | opp_overlap 3462626, overlap 3462620 ATCGGATTCTGAAAA CGGGTGGC AATG GCTGCCCG TTTTTATTTTCTCCG TERM 4341 3462905 - 3462922 + G 74 -2.7 -4.94672 | TTTGGTTTGCATGTG GAGTTTG ATCC TGAACTC TTTTTAGTCTTGTTT yjcE 3462755 - 3464404 + | hypothetical protein TERM 4342 3464482 - 3464424 - T 93 -15.5 -2.76456 | gap 1, opp_overlap 3464445 3464471, overlap 3464445 AAAGCGACGTAACCA GGCCCGAGGTAATCTGAAAAAGGTGCAA TCTT TTGCACCTTTAACAGGTTAGCTCGGG-C GAACATTCATGATTC TERM 4343 3464462 - 3464445 - T 93 -9.9 -4.67234 | opp_overlap 3464445, overlap 3464424 AGGTAATCTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT TERM 4344 3464445 - 3464462 + T 75 -9.9 -3.5774 | opp_overlap 3464424 3464445 AGGTAATCTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT yjcF 3465850 - 3464558 - | hypothetical protein TERM 4345 3465926 - 3465941 + r 80 -6.2 -4.80736 | opp_overlap 3465925 GACTGTCAAAAATCG CTCATT TTTT AATGAG TTTATTTGTTTAATA actP 3467677 - 3466028 - | acetate permease TERM 4346 3467642 - 3467670 + g 72 -6 -4.33105 | gap 1 GTTAGCTGCGAAAGG GAG-TGTGGCGGC AAGC GCCGTCAGAACTC TTTTCATGATGCTTG yjcH 3467988 - 3467674 - | hypothetical protein TERM 4347 3467910 - 3467925 + g 75 -5.4 -4.62783 | overlap 3467911 TAATCGACAGGATGG TGGCAA ACCG TTGCCG TTTTTCGACTAACTC TERM 4348 3468111 - 3468080 - H 78 -12.2 -2.52464 | overlap 3468090 3468091 CCCTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATCAATGCCTGATGC TERM 4349 3468137 - 3468091 - H 70 -10.7 -2.57931 | opp_overlap 3468122, overlap 3468080 3468090 3468117 3468118 TGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCA ATCAA TGCCTGATGCGACGCTGTCGC GTCTTATCAGGCCTA TERM 4350 3468150 - 3468117 - H 73 -9.5 -3.34344 | opp_overlap 3468122, overlap 3468091 3468090 3468118 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAAACCGTTACCG TERM 4351 3468149 - 3468118 - H 81 -13 -2.60392 | opp_overlap 3468122, overlap 3468091 3468090 3468117 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAAACCGTTACC TERM 4352 3468122 - 3468140 + H 79 -11 -3.30124 | opp_overlap 3468091 3468090 3468118 3468117 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA TERM 4353 3469864 - 3469880 + H 78 -6.5 -4.64676 | opp_overlap 3469864, overlap 3469865 CGCCTTCCCAGATGA TGGCGGT GCG ATCGCCG TTTTCTTGCAGATGG TERM 4354 3470520 - 3470500 - H 100 -9.7 -5.51353 | overlap 3470501 GAAAAACAATAAAAA CCGCCATTG CAA CAATGGCGC AATTCGGATGAAGCC TERM 4355 3470519 - 3470501 - H 95 -13.2 -3.87151 | overlap 3470500 AAAAACAATAAAAAC CGCCATTG CAA CAATGGCG CAATTCGGATGAAGC TERM 4356 3471151 - 3471133 - g 72 -8 -3.8709 | opp_overlap 3471147 AAACCTTTTGAGAAA GCCGGACG TTT CGACCAGC AATCGATGGTTTGCG nrfA 3470539 - 3471975 + | cytochrome c nitrite reductase nrfB 3472020 - 3472586 + | cytochrome c-type protein NrfB TERM 4357 3472686 - 3472735 + G 75 -11.5 -2.93703 | gap 1, overlap 3472688 TGAATATCAATGGGG TGCGTTACGGCATGGTGCATGACG AGT CGTTATGCATCG-GCTGTACCGCC TGTATGGATGCTTGT nrfC 3472583 - 3473254 + | formate-dependent nitrite reductase nrfD 3473251 - 3474207 + | formate-dependent nitrate reductase, transmembrane protein TERM 4358 3474837 - 3474868 + G 83 -12.9 -3.07935 | overlap 3474835 GCGGCGAGTTTGATG CGGCCAGCGCCCG AATTTG CTGGCGCTGGGCG TTACCTGGCTGGAGT TERM 4359 3475716 - 3475728 + G 100 -10.5 -4.82901 | opp_overlap 3475716 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTATGAAGCACG TERM 4360 3475728 - 3475716 - g 76 -10.5 -3.34344 | opp_overlap 3475716 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTATGAAGCACG nrfE 3474287 - 3475945 + | heme lyase subunit NrfE nrfF 3475938 - 3476321 + | formate-dependent nitrite reductase complex subunit NrfF nrfG 3476318 - 3476914 + | formate-dependent nitrite reductase complex subunit NrfG TERM 4361 3478379 - 3478395 + G 70 -6.5 -4.28713 | GTAGCGTAGGTATTC CGCTGGA AGG TCTGGCG TTTATTGCTGGTGTT gltP 3477256 - 3478569 + | glutamate/aspartate:proton symporter TERM 4362 3478601 - 3478575 - T 86 -13 -3.30203 | opp_overlap 3478577, overlap 3478570 3478577 GGATCAATAATTGAA GATTGCCGGGGA TAT CCCCCGGCAATG TGTGGATGCCTGATG TERM 4363 3478599 - 3478577 - T 100 -15.6 -3.21153 | opp_overlap 3478577, overlap 3478575 3478570 ATCAATAATTGAAGA TTGCCGGGGA TAT CCCCCGGCAA TGTGTGGATGCCTGA TERM 4364 3478577 - 3478599 + T 87 -14.9 -2.91912 | opp_overlap 3478577 3478575 3478570 ATCAATAATTGAAGA TTGCCGGGG ATATC CCCCGGCAA TGTGTGGATGCCTGA TERM 4365 3478608 - 3478642 + T 70 -10.7 -2.53911 | overlap 3478618 CCGGCAATGTGTGGA TGCCTGATGCGACGC TTGCC GCGTCTTATCAGGCC TACCTTAACCGTTGG TERM 4366 3478647 - 3478661 + T 80 -7.2 -4.62302 | CTTATCAGGCCTACC TTAACC GTT GGTTAA TTTTTCAAACTCTTC yjcO 3479315 - 3478647 - | hypothetical protein TERM 4367 3479415 - 3479396 - R 100 -13.6 -5.66684 | GAATGGATAAAAAAA CAGCCTCC GAAA GGAGGCTG TAGAAAGGACTGTAT TERM 4368 3479488 - 3479540 + r 73 -7.9 -4.19177 | gap 4, opp_overlap 3479486 TACTCGTCAATCACG TACTGC-TCG-GCG-G-CGCGCTGATC GGA GATCGGCTCGACGCGCACGGCGCAGTA TTTGTATTCCGGCGT TERM 4369 3479716 - 3479749 + r 74 -8.3 -3.91897 | gap 1 ACCAATGCCTCATCT TCAATACC-CAGACGT TTG GCGTCTTCGGTATTGA TTTGTGCGTAGCCAG TERM 4370 3480263 - 3480274 + r 77 -7.2 -4.48987 | GCAAAATGACATCCG CCGC CGAC GCGG TTTTGGTTATAAAGA TERM 4371 3480829 - 3480864 + r 93 -9.9 -4.69053 | gap 1 TACTCTTCAAAGCCT TCTGTACGG-GAAGCG ACGAA CGCTTTGTCGTACAGA TTTTCTTCAATAATG TERM 4372 3481768 - 3481743 - R 95 -11.9 -4.10552 | overlap 3481745 CGTGACGAAACGAAA TACCGCGTGAC AGCC ATCACGCGGCA GACATTTTATTTTTT TERM 4373 3481766 - 3481745 - R 88 -12.3 -3.64541 | overlap 3481743 TGACGAAACGAAATA CCGCGTGAC AGCC ATCACGCGG CAGACATTTTATTTT yjcP 3483241 - 3481775 - | putative outer membrane efflux protein MdtP TERM 4374 3482260 - 3482243 - G 70 -4.1 -4.62872 | overlap 3482244 ATCAAGGCCGAAAAA CGCTTTG ATAT CAAAGCT CGGATAGAACAACGC TERM 4375 3483087 - 3483112 + g 72 -6.9 -4.21141 | gap 1 TGCGGCCAGCCGGAG CTGGCAAGATGA ATA TCATCG-GCCAG TTTGATTTGTTCCGG yjcQ 3485280 - 3483238 - | multidrug efflux system protein MdtO TERM 4376 3485032 - 3485008 - G 71 -2.7 -4.8048 | overlap 3485010 3485011 TTTGTAGATCAAAAA CAGGCTGCCGA TCT CCAGCACCGTG GCAACCACAAACAAG yjcR 3486311 - 3485280 - | multidrug resistance protein MdtN TERM 4377 3485822 - 3485836 + g 88 -12.8 -3.62597 | opp_overlap 3485812 3485810 TAAGATCCGCTTCTG CGGCGC GCT GCGCCG TTCTTGCACGGTCAA TERM 4378 3485914 - 3485936 + g 90 -7.6 -4.85599 | CGTAATGTATCTGTG GCCTGTTTCG CGG CGGCACGGGC TTTTTCTACCGTGGC S3609 3486478 - 3486753 + | IS1 orfA S3610 3486672 - 3487175 + | IS1 orfB phnE 3487393 - 3487169 - | membrane channel protein component of phosphonate transporter phnD 3488464 - 3487448 - | periplasmic binding protein component of phosphonate transporter TERM 4379 3487822 - 3487836 + g 76 -7.8 -4.21936 | overlap 3487823 TCAGCTCTTTAAGCT TCTCCG GCG CGGAGG TTTTCAGCTTGTCGA phnC 3489277 - 3488489 - | phosphonate/organophosphate ester transporter subunit TERM 4380 3488867 - 3488887 + g 74 -8.9 -3.96327 | CATGCCAACGCGGGT CAGCGCCTG TAA CGCGCGCTG TTTCTGCTCGCCGGT phnB 3489853 - 3489410 - | hypothetical protein TERM 4381 3489959 - 3489907 - R 73 -10.6 -2.98088 | gap 1, opp_overlap 3489909 3489929 3489930, overlap 3489914 3489927 3489929 3489930 TTCGAAATTTATACA GATGAGAGGCTGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAGTCGG-CATC GTTGCCGGATGCGGC TERM 4382 3489953 - 3489914 - R 100 -17.2 -2.90797 | opp_overlap 3489909 3489929 3489930, overlap 3489907 3489927 3489929 3489930 TTTATACAGATGAGA GGCTGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAGTC GGCATCGTTGCCGGA TERM 4383 3489929 - 3489983 + r 93 -14.9 -3.33261 | gap 1, opp_overlap 3489927 3489914 3489907 3489929 3489930, overlap 3489909 3489930 GGCTGCCTGATAAGA CGCGCAAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGCGAGCGCC TTATCCGGCTTACCG TERM 4384 3489983 - 3489929 - R 74 -10.5 -3.21276 | gap 1, opp_overlap 3489909 3489929 3489930, overlap 3489927 3489914 3489907 3489930 GGCTGCCTGATAAGA CGCGCAAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGCGAGCGCC TTATCCGGCTTACCG TERM 4385 3489930 - 3489982 + r 100 -18.4 -2.59742 | gap 1, opp_overlap 3489927 3489914 3489907 3489929 3489930, overlap 3489909 3489929 GCTGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGCGAGCGC CTTATCCGGCTTACC TERM 4386 3489982 - 3489930 - R 83 -14 -2.52623 | gap 1, opp_overlap 3489909 3489930 3489929, overlap 3489927 3489914 3489907 3489929 GCTGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGCGAGCGC CTTATCCGGCTTACC phnA 3490346 - 3490011 - | hypothetical protein TERM 4387 3490401 - 3490389 - H 100 -9.1 -5.08011 | AAAAGCGCCAAAAAA CGGCA GAT TGCCG AAAAAGGCCGCAATT TERM 4388 3491512 - 3491500 - g 77 -3.4 -5.03314 | CGCATCTGCAAAAAA TGCT TAACC AGCA GCTGGCACGCGCCTC yjdA 3490749 - 3492977 + | hypothetical protein yjcZ 3493007 - 3493852 + | hypothetical protein proP 3494116 - 3495618 + | proline/glycine betaine transporter TERM 4389 3495660 - 3495630 - T 78 -12.6 -2.66593 | overlap 3495626 ATAAGCTGAAACGGA TGGCCTGATGTGAC GCT GTCTTATCAGGCCA ATTGAACTCTTAAGG TERM 4390 3495770 - 3495789 + T 72 -5 -4.65722 | gap 1, overlap 3495773 TAACTACCGTGTTCA GCGTGCTGG TGG TCAGCA-GC TTTCTTTATATCTGG basS 3496895 - 3495795 - | sensor protein BasS/PmrB basR 3497564 - 3496896 - | DNA-binding transcriptional regulator BasR yjdB 3499234 - 3497561 - | putative cell division protein TERM 4391 3499285 - 3499252 - R 90 -9.7 -4.54727 | opp_overlap 3499256, overlap 3499256 GCTCGCAAAGCAAAA TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT ATGTTTGCTGGATTA TERM 4392 3499256 - 3499281 + r 100 -14.9 -4.82128 | opp_overlap 3499252 3499256 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTGG TERM 4393 3499281 - 3499256 - R 100 -14.9 -3.78998 | opp_overlap 3499256, overlap 3499252 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTGG yjdE 3500645 - 3499308 - | arginine:agmatin antiporter TERM 4394 3500611 - 3500579 - G 80 -12 -3.33162 | overlap 3500582 CACCTGACCCCATAA TATTCCCCGACACC ATCAG GGTGACGGGGATTA AGCCCACTTTGTGAG TERM 4395 3500608 - 3500582 - G 84 -13.7 -2.53822 | overlap 3500579 CTGACCCCATAATAT TCCCCGACACC ATCAG GGTGACGGGGA TTAAGCCCACTTTGT adiY 3501543 - 3500782 - | putative ARAC-type regulatory protein TERM 4396 3500873 - 3500863 - G 75 -5.4 -4.69487 | opp_overlap 3500863 3500861 AAAGACAGAAATAAA GTAC GAC GTAC TGTTGTAGCCGCAGG TERM 4397 3501750 - 3501732 - R 95 -3 -5.85178 | AACAGGCAAAAAAAA GCGTGG GGTGGGG CCGCGC AAAAAGTATGACATT TERM 4398 3501819 - 3501809 - R 79 -8.2 -4.2349 | overlap 3501810 TTGCCATACTCAAAA GGCC TAA GGCC AGGCGGCGTAATGTT adiA 3504135 - 3501868 - | biodegradative arginine decarboxylase TERM 4399 3502183 - 3502201 + g 90 -7.4 -4.86731 | GGAATAGGCTTCGTT CAACCGTG CGC CAGGGTTG TTTTCTTTCAGCCAG TERM 4400 3502470 - 3502481 + g 72 -7.2 -4.20918 | opp_overlap 3502453 CAGTGACCAGCGCCG CCGG AACA CCGG TTTCTTCCAGTTCAC TERM 4401 3502678 - 3502689 + g 70 -5.8 -4.20367 | TTTGCCGGTTTGTGG GTCG GTGA CGAC TTCTTTGTTCCACGG TERM 4402 3503014 - 3503004 - G 70 -6.8 -4.07687 | opp_overlap 3503004 AGTGGGTGGCGAAAA CGGT AGG ACCG TTGTGATCGCCAGGT melR 3505242 - 3504334 - | DNA-binding transcriptional regulator MelR TERM 4403 3504687 - 3504673 - G 75 -5.6 -4.66537 | opp_overlap 3504683, overlap 3504675 CTGGCTAACATAAAA TTGCGC ATG GCGCGA GACGCTGTTTTTGTG TERM 4404 3504683 - 3504694 + g 74 -2.2 -5.03994 | gap 1, opp_overlap 3504675 3504673 TAAAATTGCGCATGG C-GCG AGA CGCTG TTTTTGTGTGTGCGC TERM 4405 3505446 - 3505393 - H 78 -12.2 -2.54896 | gap 3, opp_overlap 3505424, overlap 3505389 TTTTCAGGTAATTTA TTCCCATAAACTCAGATTTACTGC-TG CTT CACGCAGGA--TCTGAGTTTATGGGAA TGCTCAACCTGGAAG TERM 4406 3506177 - 3506165 - g 70 -6.9 -4.13945 | opp_overlap 3506165 3506167, overlap 3506166 AGCTGGAGCGCAAAA CCGCC GAC GGCAG TTACGTGAATCTCTA TERM 4407 3506167 - 3506210 + G 80 -11.6 -3.28712 | opp_overlap 3506165 3506166, overlap 3506165 CTGGAGCGCAAAACC GCCGACGGCAGTTACGTGAA TCTC TACCCGGAACTGCTGGCGGC TTATGAAGCAGGGCA TERM 4408 3506770 - 3506745 - g 76 -7.6 -4.18494 | gap 1 TATTCTTACGGAAAA TCGCGACCGTG TTTAC CACG-CCGCGA TGATGGACCCGCATA melA 3505525 - 3506880 + | alpha-galactosidase melB 3506995 - 3508404 + | melibiose:sodium symporter TERM 4409 3508455 - 3508427 - T 75 -6.1 -4.45151 | opp_overlap 3508426 AATAGCTAACGAAAA TGGCCTGAT GCGATATGTTT ATCAGGCCA CGTCTTAATGTAATG yjdF 3509172 - 3508543 - | hypothetical protein fumB 3510941 - 3509295 - | fumarase B, fumarate hydratase class I TERM 4410 3510276 - 3510295 + g 75 -7.2 -4.36914 | gap 1 GTACGGCGGGCAGGC TGCAGTACC GAG GGTAC-GCA TTTTCTCGACGAGGA TERM 4411 3510296 - 3510312 + g 73 -3.7 -4.81249 | overlap 3510297 TACCGAGGGTACGCA TTTTCTC GAC GAGGAAG TTTTTCAGTTTGCCG TERM 4412 3511011 - 3510980 - R 76 -8.7 -4.13767 | opp_overlap 3511004 TTTGTTATTCGAAAA TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA AGTGCATTTATAAGA dcuB 3512359 - 3511019 - | anaerobic C4-dicarboxylate transporter TERM 4413 3511455 - 3511466 + g 74 -2.2 -5.0538 | GCGATCATACCGGAA CGGA AGAC TTCG TTTTTTGAGATAGAC yjdG 3513649 - 3512930 - | DNA-binding transcriptional activator DcuR yjdH 3515277 - 3513646 - | sensory histidine kinase DcuS TERM 4414 3514095 - 3514082 - G 74 -2.3 -5.14563 | TTGCTGATTAAAAAA CCAGC GATA ACCGG AGATTTGATCTTACC S3633 3515692 - 3516057 + | insertion sequence 2 OrfA protein S3634 3516015 - 3516920 + | insertion element IS2 transposase InsD yjbC 3518118 - 3517246 - | 23S rRNA pseudouridine synthase F TERM 4415 3517291 - 3517311 + g 72 -4.5 -4.61527 | overlap 3517293 GGTAAAACGCTTACC GTTGGACGC CGG GCGACCGCC TTTTTCCGCCGTTTT sorC 3518466 - 3519413 + | putative sor-operon regulator TERM 4416 3520038 - 3520026 - g 71 -9.1 -3.55815 | AAAGAGCTGGGTAAA CACGG TAT CCGTG TGGTCGGTATCGCGC sorD 3519483 - 3520289 + | sorbitol-6-phosphate 2-dehydrogenase TERM 4417 3520300 - 3520311 + G 79 -2.2 -5.24129 | GCTAAGGAGGCTTTA TGGT CAAC GCCA TTTTTTGTGCCCACG sorF 3520299 - 3520706 + | putative sorbose-permease PTS system IIA component sorB 3520706 - 3521200 + | putative sorbose-permease PTS system IIB component TERM 4418 3521869 - 3521888 + G 74 -2.8 -4.91852 | GTGCTACGTATGATG GGCGTGAA ATAT TTGATGCC TTTCTTTTTCCTCGG sorA 3521323 - 3522063 + | putative sorbose-permease PTS system IIC component sorM 3522074 - 3522862 + | putative sorbose-permease PTS system IID component sorE 3522914 - 3524143 + | putative L-sorbose-1-P-reductase TERM 4419 3524277 - 3524252 - f 79 -3.2 -5.39755 | opp_overlap 3524252, overlap 3524254 3524257 GAGAAGGATAAAAAA TATCAGCGCC TTAAGG GGCGCTCAAA TTGGTGGCAAAGTAC TERM 4420 3524615 - 3524629 + G 81 -9.2 -4.02534 | GAACAGTTGCAGGGT CGCCGC TCA GCGGTG TTTATCCCTTTCGCT pepE 3524525 - 3525214 + | peptidase E TERM 4421 3525221 - 3525241 + T 79 -11.2 -3.45742 | opp_overlap 3525220, overlap 3525219 CGTTTTTAAGTGAAT TGCCGGAT GCATG ATCCGGCA TCTTGTTCATAGTGC yjbB 3526936 - 3525305 - | putative alpha helix protein TERM 4422 3525388 - 3525371 - G 70 -4.1 -4.68384 | AGCCACCGAACAAAA CAGCG AGTTCAGG CGCTG CATATCTCCCAGTAA TERM 4423 3526778 - 3526805 + g 86 -4 -5.41143 | TACCAGTGCGGTAAC GCCGATCCCC GCGCAAAA GGCGAGCGGC TTTTTTTCGACGCTC TERM 4424 3526860 - 3526842 - G 77 -10.2 -3.70417 | overlap 3526831 3526843 AGGACAGTACGCAAA CGCGCGCC GAA GACGCGCA TTACGCCGGTTCGAA TERM 4425 3526859 - 3526843 - G 73 -11.5 -2.81768 | overlap 3526831 3526842 GGACAGTACGCAAAC GCGCGCC GAA GACGCGC ATTACGCCGGTTCGA TERM 4426 3527127 - 3527097 - R 90 -10.4 -4.29106 | opp_overlap 3527101, overlap 3527099 3527101 TTTCATATTAATAAA GAGACAGGGCACTC ATT GAGCGCCCTGTTTG TTGTAAGGAAAAGTG TERM 4427 3527125 - 3527099 - R 95 -13 -3.7456 | opp_overlap 3527101, overlap 3527097 3527101 TCATATTAATAAAGA GACAGGGCACTC ATT GAGCGCCCTGTT TGTTGTAAGGAAAAG TERM 4428 3527101 - 3527123 + r 95 -13.4 -4.30719 | opp_overlap 3527101 3527099 3527097 ATATTAATAAAGAGA CAGGGCACTC ATT GAGCGCCCTG TTTGTTGTAAGGAAA TERM 4429 3527123 - 3527101 - R 100 -15.6 -3.44527 | opp_overlap 3527101, overlap 3527099 3527097 ATATTAATAAAGAGA CAGGGCACTC ATT GAGCGCCCTG TTTGTTGTAAGGAAA metH 3530839 - 3527156 - | B12-dependent methionine synthase TERM 4430 3529686 - 3529702 + g 72 -6.5 -4.41237 | overlap 3529688 TGCTGACGCGCCACA TCCAGCG CCT CGCTGTA TTTCTCTTCTTTGAT TERM 4431 3529688 - 3529700 + g 76 -9.1 -3.79177 | overlap 3529686 CTGACGCGCCACATC CAGCG CCT CGCTG TATTTCTCTTCTTTG TERM 4432 3531015 - 3531001 - H 81 -3.6 -5.30348 | AGCTAACAATAAAAA TGAAAA TAA TTTCCA CGATACAGAAAAAGG iclR 3531039 - 3531863 + | transcriptional repressor IclR TERM 4433 3534676 - 3534656 - T 84 -5.3 -5.37345 | overlap 3534657 3534661 CGTAATCATAAAAAA CCACACGCC CGT GACGGGTGA CACCGAAGTTTTTAA TERM 4434 3534802 - 3534826 + T 70 -9.3 -3.31144 | opp_overlap 3534802 TGTTCCAGCCAGATA TTGAGCGGC ACCATCC GCCGCTCGA TTATAGAGATGGCGA TERM 4435 3534854 - 3534869 + T 78 -4.7 -5.07053 | CGAATTACAATCTGC TCACC AAGATC GGTGA TTTTTTCCGCTGCTT TERM 4436 3535733 - 3535710 - T 81 -5.2 -5.20783 | overlap 3535711 AGCTAAAGATAAAAA GCCGCTCG GGAGTAAG CGAGCGGT GGTCAAATAACCGAC TERM 4437 3535732 - 3535711 - T 72 -8.7 -3.70843 | overlap 3535710 GCTAAAGATAAAAAG CCGCTCG GGAGTAAG CGAGCGG TGGTCAAATAACCGA TERM 4438 3535789 - 3535768 - T 77 -3.6 -5.09895 | CACGGAGTTAAAAAA GCTCTCCG CAATCT CGAAGCGC GGGTAATCCGGCAAC aceA 3537558 - 3536254 - | isocitrate lyase TERM 4439 3538208 - 3538194 - R 71 -7 -4.15044 | overlap 3538195 TTTGCTCGGAATAAA CGCGGC CAT GCCGCC CATCGCAAAAGCACC TERM 4440 3538207 - 3538195 - R 73 -10.5 -3.08812 | overlap 3538194 TTGCTCGGAATAAAC GCGGC CAT GCCGC CCATCGCAAAAGCAC TERM 4441 3539412 - 3539397 - R 100 -10.4 -5.63517 | TTCGGAAATAAAAAA GGCACC CGAA GGTGCC TGAGGTAAGGTGCTG metA 3540387 - 3539458 - | homoserine O-succinyltransferase yjaB 3540544 - 3540987 + | hypothetical protein TERM 4442 3541085 - 3541066 - f 100 -10 -4.7629 | opp_overlap 3541066 TCACCAACGCAAAAA GGCCATCC TGAC GGATAGCC TTTCGCTTAATTTGA TERM 4443 3541232 - 3541253 + F 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4444 3543721 - 3543733 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4445 3544275 - 3544299 + F 71 -8 -3.93061 | gap 1, opp_overlap 3544281 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4446 3544501 - 3544514 + F 75 -6.7 -4.41177 | overlap 3544466 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 4447 3546291 - 3546303 + F 71 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4448 3546323 - 3546337 + F 76 -4.2 -5.0916 | opp_overlap 3546323, overlap 3546312 3546324 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTCAACC TERM 4449 3546610 - 3546592 - f 73 -2.4 -5.20783 | opp_overlap 3546600, overlap 3546594 ATTGAAAGAGAAAAA TTCGCG AGCGTTG CGCAAA CGTTTTCGTTACAAT TERM 4450 3546655 - 3546696 + F 100 -20.5 -2.96216 | opp_overlap 3546644 3546642, overlap 3546644 3546657 AGGATGCCCCGTTAG GGGCGTTAGCTGAGTTTTT CGCG AAAAATTCAGCTAACGCTC TCTGTAATAGTCAAA TERM 4451 3546657 - 3546694 + F 100 -19.5 -3.03443 | opp_overlap 3546644 3546642, overlap 3546644 3546655 GATGCCCCGTTAGGG GCGTTAGCTGAGTTTTT CGCG AAAAATTCAGCTAACGC TCTCTGTAATAGTCA purH 3546727 - 3548316 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 4452 3549041 - 3549005 - g 72 -8.6 -3.81259 | gap 1, overlap 3549007 AGATAACGGACCAAA CACCGGCGGGATGGGCG CTTA CTCCC-CCGCGCCGGTA GTAACCGATGAAGTT TERM 4453 3549039 - 3549007 - g 71 -9 -3.48506 | gap 1, overlap 3549005 ATAACGGACCAAACA CCGGCGGGATGGGCG CTTA CTCCC-CCGCGCCGG TAGTAACCGATGAAG purD 3548328 - 3549617 + | phosphoribosylamine--glycine ligase hydG 3550939 - 3549614 - | transcriptional regulatory protein ZraR TERM 4454 3549663 - 3549690 + g 90 -10.4 -4.36914 | opp_overlap 3549663 GTGATCCCTAACTGA CGGGCGGCTTCG GTTT TGTTGCCGCCCG TTTTCTCCAGCGCCG hydH 3552312 - 3550936 - | sensor protein ZraS TERM 4455 3552114 - 3552076 - G 77 -11.6 -3.14344 | CATTTCTTCCAGTAA GGCCTGCTGCTGCGCATG ATG CATGCGCATCCCCATGCC GACGCGCGAGCCGGA TERM 4456 3552447 - 3552420 - H 84 -7.8 -4.81083 | gap 1, opp_overlap 3552420 TTCAATGAGTAAAAA TGACTCG-CTACC CGC AGCAGGCGAGTCA TTTTTACTCGTTTAT TERM 4457 3552420 - 3552447 + H 80 -6.2 -4.85267 | opp_overlap 3552420 TTCAATGAGTAAAAA TGACTCGCTACC CGCA GCAGGCGAGTCA TTTTTACTCGTTTAT zraP 3552550 - 3552975 + | zinc resistance protein yjaH 3553672 - 3552977 - | hypothetical protein TERM 4458 3553639 - 3553654 + g 72 -10.4 -3.35639 | opp_overlap 3553639 GCCAGAAAGACAAAA GGGGTG AAAC CACCCC TTCGTTAAAACTGTT TERM 4459 3553654 - 3553639 - G 100 -10.4 -4.84918 | opp_overlap 3553639 GCCAGAAAGACAAAA GGGGTG AAAC CACCCC TTCGTTAAAACTGTT hupA 3553957 - 3553685 - | transcriptional regulator HU subunit alpha yjaG 3554734 - 3554144 - | hypothetical protein nfi 3555448 - 3554777 - | endonuclease V TERM 4460 3555039 - 3555049 + g 71 -2.4 -5.00616 | opp_overlap 3555039 AGCGGTTCGAATTTA CCGC AGA GCCG TTTTTTCGCCACGCC TERM 4461 3555361 - 3555373 + g 72 -7.7 -3.89822 | CGGCTCCGGCGATCA GATCC GGT GGATC TTTATCGAGTCGATC TERM 4462 3555604 - 3555585 - R 83 -6.4 -4.91429 | opp_overlap 3555587, overlap 3555587 AAATGGCAAATAAAA TAGCCTGA TGGA TCAGGCTC TTAGCGGTGATACTG TERM 4463 3555602 - 3555587 - R 79 -9 -4.06281 | opp_overlap 3555587, overlap 3555585 ATGGCAAATAAAATA GCCTGA TGGA TCAGGC TCTTAGCGGTGATAC hemE 3556669 - 3555605 - | uroporphyrinogen decarboxylase TERM 4464 3556502 - 3556514 + g 74 -6.2 -4.56597 | CAAAGTCACTTCGCA CGCC AGCTC GGCG TTTTTGCACAGCGAC TERM 4465 3556551 - 3556536 - G 74 -6 -4.56358 | opp_overlap 3556537, overlap 3556537 CACAGCGACATAAAA TCGCCC GCCT GGGCGC GCGTGGCTTTATATT nudC 3557482 - 3556709 - | NADH pyrophosphatase TERM 4466 3557425 - 3557461 + g 75 -4.3 -4.78149 | opp_overlap 3557424, overlap 3557428 3557430 TCGGCAACCATAATT TTTGTTCATGGCTGACG ACC CACCAGCCGTGATCTAA TTTTTCAATTATACG yjaE 3557577 - 3558053 + | anti-RNA polymerase sigma 70 factor thiC 3558287 - 3560182 + | thiamine biosynthesis protein ThiC thiE 3560182 - 3560817 + | thiamine-phosphate pyrophosphorylase thiF 3560810 - 3561565 + | thiamine biosynthesis protein ThiF TERM 4467 3561701 - 3561723 + F 72 -4.9 -4.70626 | overlap 3561719 GACGCAACATATCGT GCAGGAT GGCGACCAG ATCCTGC TTTTTCAGGTTATTG thiG 3561751 - 3562521 + | thiazole synthase thiH 3562518 - 3563651 + | thiamine biosynthesis protein ThiH TERM 4468 3563853 - 3563866 + T 100 -9.5 -4.8384 | opp_overlap 3563853 ACACCCATAAAAAAA CCCGC CGAA GCGGG TTTTTACGTTATTTG TERM 4469 3563866 - 3563853 - T 100 -9.5 -5.65177 | opp_overlap 3563853 ACACCCATAAAAAAA CCCGC CGAA GCGGG TTTTTACGTTATTTG rpoC 3568116 - 3563893 - | DNA-directed RNA polymerase subunit beta' TERM 4470 3566281 - 3566265 - G 78 -7.9 -4.40561 | GGTCCGCAAAAATAA CGGTCGG TTT CAGACCG AGAATGCGGTAGCAG TERM 4471 3566776 - 3566760 - G 72 -7.9 -3.87373 | opp_overlap 3566759 3566756 3566766 TATATGCCGCACAAA CCAGCGG GTG CAGCTGG ATAGCTTTACCTTCG TERM 4472 3568174 - 3568145 - R 70 -9.2 -3.4252 | opp_overlap 3568145, overlap 3568146 TCGGAGTTAGCACAA TCCGCTGCCGGG TTTTAC CCCGACAGCAGT GACCTGTTTGAGCGA TERM 4473 3568173 - 3568146 - R 78 -12.7 -2.65298 | opp_overlap 3568145, overlap 3568145 CGGAGTTAGCACAAT CCGCTGCCGGG TTTTAC CCCGACAGCAG TGACCTGTTTGAGCG rpoB 3572221 - 3568193 - | DNA-directed RNA polymerase subunit beta TERM 4474 3569179 - 3569195 + g 86 -6.5 -5.10033 | overlap 3569180 CGTCATACTGCTCAG CCAGCTG TTC CAGCTGA TTTTGTTTCTCTTCG TERM 4475 3569180 - 3569194 + g 77 -10 -3.64393 | overlap 3569179 GTCATACTGCTCAGC CAGCTG TTC CAGCTG ATTTTGTTTCTCTTC TERM 4476 3571405 - 3571426 + g 81 -6.5 -4.87665 | gap 1 CCAGCTGGCGAATGT GGCGCGCAGT GAT ACGGCG-GCC TTTTTCTACGTACAC TERM 4477 3572501 - 3572476 - R 100 -17.7 -4.64766 | opp_overlap 3572469 3572465 3572464, overlap 3572496 CTTACAGCGCAAAAA GGCTGGTGACT AAAA AGTCACCAGCC ATCAGCCTGATTTCT rplL 3572906 - 3572541 - | 50S ribosomal protein L7/L12 rplJ 3573470 - 3572973 - | 50S ribosomal protein L10 rplA 3574587 - 3573883 - | 50S ribosomal protein L1 TERM 4478 3574044 - 3574084 + g 74 -3.1 -4.98255 | opp_overlap 3574052 CTTTCAGTTTGTCAG CGTCAAAGTCCACTTTACC GAT GGTGGTGTGGATGATGCCG TTTTTGTCGTTACGG rplK 3575019 - 3574591 - | 50S ribosomal protein L11 TERM 4479 3574695 - 3574718 + g 77 -8.2 -4.13343 | gap 1, overlap 3574713 CTTTGGTCTGCGCGA TTTCCTGCAGC TGA GC-GCGGGAAA TTTTACCCACTTTGT TERM 4480 3575107 - 3575078 - R 90 -7.3 -5.36441 | gap 1, overlap 3575080 3575105 CCGTGATATAAAAAA TCGTTT-TACGGGC AAG GCCCATAAAAACAA AAGGCGCGAAATTGT TERM 4481 3575143 - 3575105 - R 100 -13.3 -4.8543 | opp_overlap 3575110, overlap 3575078 3575110 CAAGGCCCATAAAAA CAAAAGGCGCGAAATTG TATTC CAATCTCACGCCTTGTG CAACGATTAAATCGC TERM 4482 3575138 - 3575110 - R 100 -11.8 -5.35224 | opp_overlap 3575110, overlap 3575105 CCCATAAAAACAAAA GGCGCGAAATTG TATTC CAATCTCACGCC TTGTGCAACGATTAA TERM 4483 3575143 - 3575161 + r 75 -3 -5.1675 | AATCTCACGCCTTGT GCAACGAT TAA ATCGCCGC TTTTTTGATCGCTGG nusG 3575723 - 3575178 - | transcription antitermination protein NusG secE 3576108 - 3575725 - | preprotein translocase subunit SecE TERM 4484 3575816 - 3575802 - G 73 -11.4 -2.65264 | GGATCAGTGACATTA CTGCGG TAA CCGCAG CCACAATCAGCGTGG TERM 4485 3575905 - 3575916 + g 70 -4.4 -4.5442 | opp_overlap 3575905 ACGGGCAAAAGCAAT GGTA GCTT TACC TTTTGTCGTTAACAG TERM 4486 3576274 - 3576315 + r 88 -14.5 -3.0792 | opp_overlap 3576275 3576286, overlap 3576286 AGGTTCTGGTACGAA AGCGTGCAAAAAGGGCATC AAAT GATGCCCTTTTAGTGCGCA TTGCGTCAAATGTTA TERM 4487 3576314 - 3576275 - R 100 -13.6 -3.72576 | opp_overlap 3576274 3576286, overlap 3576286 GGTTCTGGTACGAAA GCGTGCAAAAAGGGCATC AAAT GATGCCCTTTTAGTGCGC ATTGCGTCAAATGTT TERM 4488 3576303 - 3576286 - R 95 -11.3 -4.60924 | opp_overlap 3576274 3576286, overlap 3576275 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTAGTGCGCATTG TERM 4489 3576286 - 3576303 + r 91 -11.3 -4.2679 | opp_overlap 3576286 3576275, overlap 3576274 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTAGTGCGCATTG tuf 3577522 - 3576338 - | elongation factor Tu TERM 4490 3577476 - 3577492 + g 70 -4.4 -4.4715 | gap 1, opp_overlap 3577476 ACGTGGCCGATAGTA CCG-ACG TTAA CGTGCGG TTTTGTACGTTCAAA TERM 4491 3577838 - 3577850 + H 73 -7.7 -4.15222 | opp_overlap 3577834 TCTGCACTGAATATC GAGAG AAG CTCTC TTTATTCGAGCCGGT S3687 3578098 - 3578253 + | hypothetical protein coaA 3578464 - 3579390 + | pantothenate kinase TERM 4492 3579397 - 3579414 + T 88 -8.4 -4.80417 | CGCAAATAATTTGCA GGGGAG CGAATA CTCCCC TTTCTTATTTTTCTG birA 3580384 - 3579419 - | biotin--protein ligase TERM 4493 3580016 - 3579995 - G 74 -8.7 -3.90766 | opp_overlap 3579994, overlap 3580008 CATCGACAAATATAA GTTTGCGCC AAAA GGCGAAAAC CATTTCCGCCCCCGG TERM 4494 3580026 - 3580008 - G 81 -9.6 -4.08064 | opp_overlap 3579994, overlap 3579995 3580016 AAGTTTGCGCCAAAA GGCGAAAA CCA TTTCCGCC CCCGGCGACCACGGC murB 3581409 - 3580381 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 4495 3581521 - 3581508 - R 71 -3.7 -4.84529 | opp_overlap 3581509, overlap 3581501 3581500 3581509 GTAGAAACGCAAAAA GGCCC GACT GGGCT TTCTGCTTAATTTGA TERM 4496 3581509 - 3581520 + r 71 -7.2 -4.11938 | opp_overlap 3581509 3581508 3581501 3581500 TAGAAACGCAAAAAG GCCC GACT GGGC TTTCTGCTTAATTTG TERM 4497 3581668 - 3581689 + r 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4498 3584157 - 3584169 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4499 3584711 - 3584735 + r 71 -8 -3.93061 | gap 1, opp_overlap 3584717 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4500 3584937 - 3584950 + r 75 -6.7 -4.41177 | overlap 3584902 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 4501 3586981 - 3586933 - R 87 -10.4 -4.18094 | gap 1, opp_overlap 3586933 3586930, overlap 3586934 CAAATCAGCCTAAAA CTGCCAGTTTTTCGAGCGTTTCG AAGC CGTAACGCT-GTAAAACGGGCAA TAATTGTTCAGCTTC TERM 4502 3586980 - 3586934 - R 78 -11.7 -3.10134 | gap 1, opp_overlap 3586933 3586930, overlap 3586933 AAATCAGCCTAAAAC TGCCAGTTTTTCGAGCGTTTCG AAGC CGTAACGCT-GTAAAACGGGCA ATAATTGTTCAGCTT murI 3587779 - 3586922 - | glutamate racemase TERM 4503 3587716 - 3587681 - GR 95 -14 -3.41125 | gap 1, opp_overlap 3587678, overlap 3587702 GTCATAGACCGACAA CCCACCGACGCCGGAGT CAA ACACCAGCA-CGGTGGG ACGTGGTTCAGAAGG btuB 3589568 - 3587724 - | vitamin B12/cobalamin outer membrane transporter TERM 4504 3589105 - 3589123 + gH 70 -9.6 -3.01712 | ATTTCCGTTCCGGGT TCATCGCG CGT CGTGATGA TATTCACCACCCCGC TERM 4505 3590973 - 3590946 - g 74 -9.8 -3.45839 | opp_overlap 3590944 3590946 ATCTGGAAACATTAA GCCAGACGCACA AGGT CGAACGTCTGGC TCTGTTTGATCAGTT trmA 3589937 - 3591037 + | tRNA (uracil-5-)-methyltransferase TERM 4506 3591071 - 3591040 - T 100 -15.2 -4.41494 | overlap 3591041 3591042 GACCGCGAAGTAAAA CCCATGCCGGATGC GCCA GCATCCGGCATGAT ACCGATTACTCAGCA TERM 4507 3591070 - 3591041 - T 100 -18.7 -3.24414 | overlap 3591040 3591042 ACCGCGAAGTAAAAC CCATGCCGGATGC GCCA GCATCCGGCATGA TACCGATTACTCAGC TERM 4508 3591069 - 3591042 - T 100 -20 -2.54166 | overlap 3591041 3591040 CCGCGAAGTAAAACC CATGCCGGATGC GCCA GCATCCGGCATG ATACCGATTACTCAG yijD 3591436 - 3591077 - | hypothetical protein TERM 4509 3591241 - 3591228 - G 73 -3.7 -4.77567 | ACGCCGAGAATAAAA CAGGC AGCT GCCAG ACCCGGCAAGCCTAC TERM 4510 3591456 - 3591470 + r 73 -4.2 -4.79752 | CGTCCTTCACATTTC CCGGAA TAA TTGCGG TTTTCTCTTGTTCAC yijC 3592140 - 3591436 - | DNA-binding transcriptional repressor FabR TERM 4511 3592038 - 3592052 + g 100 -2.7 -6.01725 | opp_overlap 3591990 TAAATGCGGCTTCCA CCAGC GAACG GCGGG TTTTTTCTTTTTGTT udhA 3592407 - 3593807 + | soluble pyridine nucleotide transhydrogenase oxyR 3594707 - 3593790 - | DNA-binding transcriptional regulator OxyR TERM 4512 3594893 - 3594911 + r 100 -11 -6.17268 | CCAACGTGAACTTTT GCGGATCT CCA GGATCCGC TTTTTTTTATTCTAC TERM 4513 3595120 - 3595102 - R 83 -6.1 -4.95957 | CAAAGGAAGCAAAAA CAAAACT GCCAA AGTTTTG AATCCCGGCGATGGA TERM 4514 3595874 - 3595862 - R 77 -9.1 -3.91897 | TCCCGCAGGCATAAA TGGCG CTT CGCCA ATACCCAGACCGGGT S3704 3596405 - 3595902 - | IS1 orfB S3705 3596599 - 3596324 - | IS1 orfA S3707 3598301 - 3597087 - | putative sensor protein TERM 4515 3597330 - 3597316 - G 76 -7.8 -4.1721 | ACCCATAGGTCAAAA TGCAGC GCC GCCGCA TGACAAACAGGCGAT TERM 4516 3597769 - 3597779 + g 74 -8.2 -3.91798 | CACAACTGCTCTTCT GGCC ACA GGCC TTTGGTTGCCGGTTC TERM 4517 3598428 - 3598412 - R 88 -3.7 -5.65496 | CATTAAAAACAAAAA TTTCTAC CGA GGAGAAA AAATACCCTCAAAAA TERM 4518 3598698 - 3598727 + r 89 -9.3 -4.59109 | overlap 3598700 CACCAGAATGCTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4519 3598700 - 3598725 + r 100 -16.3 -3.90762 | overlap 3598698 CCAGAATGCTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S3708 3600037 - 3598709 - | IS4 orf TERM 4520 3600045 - 3600070 + r 72 -9.1 -3.61398 | opp_overlap 3600045 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4521 3600070 - 3600045 - R 100 -9.8 -5.61596 | opp_overlap 3600045 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC argH 3601612 - 3600239 - | argininosuccinate lyase TERM 4522 3600379 - 3600401 + g 72 -10.6 -3.03635 | opp_overlap 3600377, overlap 3600368 TCACCTGACTGAATT TCTGCAACTC ACT GAGTGGCAGA TCTTCCAGCGGTTTG argB 3602446 - 3601673 - | acetylglutamate kinase TERM 4523 3602177 - 3602190 + g 71 -2.3 -4.90525 | CTGATGTTTCTTCGC CCATG CCAA CAGGG TTTTATTTGCCGTTC argC 3603461 - 3602457 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 4524 3603537 - 3603555 + H 73 -2.4 -5.14163 | GCTGGTGGGTTTTAT TACGCTCA ACG TTAGTGTA TTTTTATTCATAAAT argE 3603615 - 3604766 + | acetylornithine deacetylase TERM 4525 3604807 - 3604769 - f 87 -9.5 -4.25104 | gap 1, opp_overlap 3604793 3604797, overlap 3604773 TTGCTGGCATTAAAA CGTAGGCCGGATAAGGCG CTCG CGCCGCATCCGGCAC-CG TTGCCAAACTCCGGT TERM 4526 3604804 - 3604773 - f 79 -12.2 -2.77781 | opp_overlap 3604793 3604797, overlap 3604769 TGGCATTAAAACGTA GGCCGGATAAGGCG CTCG CGCCGCATCCGGCA CCGTTGCCAAACTCC TERM 4527 3604865 - 3604834 - f 77 -11.6 -2.76696 | opp_overlap 3604793 3604840 3604843, overlap 3604833 CGGTGCCGCAATAAT GTCGGATGCGATGC TTGC GCATCTTATCCGAC CTACACCTTTGGTGT ppc 3605118 - 3607769 + | phosphoenolpyruvate carboxylase TERM 4528 3607808 - 3607787 - f 82 -11.5 -3.53012 | opp_overlap 3607787 TTCCTCTTCTGCAAA CCCTCGTGC TTTT GCGCGAGGG TTTTCTGAAATACTT TERM 4529 3607787 - 3607808 + F 100 -13.7 -4.41206 | opp_overlap 3607787 TTCCTCTTCTGCAAA CCCTCGTGC TTTT GCGCGAGGG TTTTCTGAAATACTT TERM 4530 3608004 - 3608020 + G 75 -4.3 -4.84033 | opp_overlap 3607997, overlap 3608007 GCTGGAAAGCCCTGG GTTGGGC ACT GCTCTAC TTTTGGTTTTTCTCT yijP 3607952 - 3609685 + | hypothetical protein TERM 4531 3609760 - 3609780 + F 91 -7.6 -5.1861 | gap 1, overlap 3609776 ATCGAACTCCCCTCA GGCCACACT TTTC AG-GTGGCC TTTTTTAATAATGCC TERM 4532 3610181 - 3610157 - g 74 -6.3 -4.52347 | opp_overlap 3610178, overlap 3610170 3610172 CAAACAATATCAAAA TCTGGCGAAGC AAC ACGTCGCCCGA CGCGGCCCACGCATA yijO 3609834 - 3610685 + | putative ARAC-type regulatory protein frwD 3611013 - 3610672 - | putative fructose-like phosphotransferase EIIB subunit 3 pflC 3611893 - 3611015 - | pyruvate formate lyase II activase TERM 4533 3611638 - 3611624 - GR 72 -9.2 -3.55801 | opp_overlap 3611624, overlap 3611625 ACCAATCCGTTCAAA CGCCCC GGA GGGGCA TTCATCCGCATCACG TERM 4534 3611637 - 3611625 - GR 71 -10.5 -2.73159 | opp_overlap 3611624, overlap 3611624 CCAATCCGTTCAAAC GCCCC GGA GGGGC ATTCATCCGCATCAC pflD 3614156 - 3611859 - | putative formate acetyltransferase 2 TERM 4535 3613425 - 3613410 - GR 77 -9 -3.8512 | opp_overlap 3613417 3613419 CATGTACCAGAATAA CTGGCA CGCC TGCCAG AACGTCTGCGGCTTA TERM 4536 3613769 - 3613793 + gr 81 -6.6 -4.59773 | gap 1, opp_overlap 3613792 CATCTGTCATCTGCC CGTT-GATGAA ATCT TTCATCGAACG TTTTTCCCAGTACGG TERM 4537 3614198 - 3614181 - R 74 -10.5 -3.27525 | CTGTGGGAAAGCGAA CCCGCCC TTGC GAGCGGG AGAAGAACTTAAGCG frwB 3614527 - 3614207 - | putative fructose-like phosphotransferase EIIB subunit 2 frwC 3615621 - 3614542 - | putative fructose-like permease EIIC subunit 2 TERM 4538 3615760 - 3615750 - R 70 -2.4 -4.93898 | ATATCAGTACAAAAA TGCG ATC CGCC TCATAACTTGCGATA TERM 4539 3616086 - 3616075 - R 74 -7.2 -4.20354 | opp_overlap 3616075, overlap 3616067 AAGGCAACGCCAAAA GCGC TCTG GCGC TGATTGGCACCGATA TERM 4540 3617494 - 3617481 - R 83 -4.5 -5.27335 | overlap 3617482 TGGGTGAAAGAAAAA CTGGC AGAA GCCAA ACAGCAACTACGTAA TERM 4541 3618928 - 3618940 + r 72 -9.1 -3.53091 | GCCAGAAAGCATGGT GCTGG CAG CCAGC TTTAAAACGCCGCGT TERM 4542 3620176 - 3620194 + r 72 -10.3 -2.83522 | overlap 3620175 GCCGCACTGCTGGTA GCTGACC AGTAC GGTCAGC GTTTCCTGCAAGAGT TERM 4543 3620259 - 3620218 - R 75 -9.6 -3.65201 | gap 1, opp_overlap 3620229, overlap 3620222 3620229 CAAGAGTGGGAATAA CCTAC-TCCAAACTCCCGG CTTGT CCGGGAGTTTGAACGCAAA ATTGCCTGATGCGCT TERM 4544 3620254 - 3620222 - R 78 -12.8 -2.65808 | opp_overlap 3620229, overlap 3620218 3620229 AGTGGGAATAACCTA CTCCAAACTCCCGG CTTGT CCGGGAGTTTGAAC GCAAAATTGCCTGAT TERM 4545 3620229 - 3620247 + r 86 -11.7 -3.53343 | opp_overlap 3620222 3620218 3620229 ATAACCTACTCCAAA CTCCCGG CTTGT CCGGGAG TTTGAACGCAAAATT TERM 4546 3620247 - 3620229 - R 86 -11.7 -3.62418 | opp_overlap 3620229, overlap 3620222 3620218 ATAACCTACTCCAAA CTCCCGG CTTGT CCGGGAG TTTGAACGCAAAATT TERM 4547 3621635 - 3621624 - R 77 -7.2 -4.53398 | CAACACCAAAAATAA GCCG AAAG CGGC AATCAGAATCGCGAA TERM 4548 3622115 - 3622083 - R 100 -21.5 -4.41616 | ACGCCGGTAAAGAAA CTTCAGCGACTGCCT GAA AGACAGTCGCTGAAG AAGGTCAGATTACAG katG 3624305 - 3622125 - | catalase; hydroperoxidase HPI(I) TERM 4549 3624559 - 3624521 - R 71 -10.4 -2.60392 | overlap 3624520 3624523 3624532 TATCCTTCAAGTAAT GAGGGAGAAAACAAGGCT GAC AACCTTATTTTCCCGCCC TCATTTCGAGGCAGC metF 3625524 - 3624634 - | 5,10-methylenetetrahydrofolate reductase TERM 4550 3625722 - 3625700 - R 100 -8.4 -5.42605 | GTAAGAAAAAGAAAA TCCGATATGC AAA GCAAACCGGA CTGCAAATATAAACT metL 3628305 - 3625873 - | bifunctional aspartate kinase II/homoserine dehydrogenase II metB 3629468 - 3628308 - | cystathionine gamma-synthase TERM 4551 3629134 - 3629109 - G 70 -6.1 -4.24342 | opp_overlap 3629114, overlap 3629112 3629114 3629115 GCCTTGATCAACAAA CAACACGCGAT AGCA ACCGCGTTTCG CCAGACTGTCGAACA TERM 4552 3629168 - 3629112 - G 76 -7.4 -4.24413 | gap 2, opp_overlap 3629114, overlap 3629109 3629114 3629115 TTGATCAACAAACAA CAC-GCGATAGCAACCGCGT-TTCGCCA GAC TGTCGAACAGGCGATAGCTACCGCCGTA GCAGTCGTGCGGCGC TERM 4553 3629164 - 3629115 - G 73 -11.5 -2.81784 | gap 1, opp_overlap 3629114, overlap 3629109 3629114 3629112 ATCAACAAACAACAC GCGATAGCAACCGCGT-TTCGCCA GAC TGTCGAACAGGCGATAGCTACCGC CGTAGCAGTCGTGCG metJ 3629745 - 3630062 + | transcriptional repressor protein MetJ TERM 4554 3630275 - 3630254 - g 85 -7.3 -4.81083 | opp_overlap 3630253 3630254 3630268, overlap 3630247 3630257 TTTAACTATGAAAAA CAGGCTG CTGATCCT CAGCCTG CTGGTTTCTGTACCT yiiX 3630246 - 3630854 + | putative peptidoglycan peptidase TERM 4555 3630882 - 3630895 + T 100 -9.5 -5.02074 | opp_overlap 3630882 TCAGGCACAAAAAAA GCGCC GTGC GGCGC TTTTTTCGGAAATCC TERM 4556 3630895 - 3630882 - T 100 -9.5 -5.64274 | opp_overlap 3630882 TCAGGCACAAAAAAA GCGCC GTGC GGCGC TTTTTTCGGAAATCC rpmE 3631127 - 3630915 - | 50S ribosomal protein L31 TERM 4557 3632473 - 3632445 - g 76 -7.9 -4.29153 | CCAGCAGAAAAAATA CCGCCTGCTGCGC CTG ACGCGCCGGGCGG GGAATGCGCGTCCGG TERM 4558 3633040 - 3633058 + G 74 -10.2 -3.53444 | overlap 3633034 GCCGATTTTCGCTCG GCAGAGCG TTT CGCTCAGC TTTACACCCAGGTCG priA 3631330 - 3633528 + | primosome assembly protein PriA cytR 3633684 - 3634709 + | DNA-binding transcriptional regulator CytR TERM 4559 3635248 - 3635232 - g 70 -10.1 -3.23853 | overlap 3635230 3635244 TCCGTGGAATGAACA GACGCCG GAA CAGCGTC AGCAAACGCTACAAC TERM 4560 3635344 - 3635333 - g 70 -5.8 -4.21974 | overlap 3635300 GTACGACTGAACAAA GCTG GCAG CAGC AGACGCGTACGTCGC ftsN 3634801 - 3635760 + | essential cell division protein TERM 4561 3635798 - 3635817 + F 100 -13.6 -4.05991 | overlap 3635810 3635811 TATAATTGCATTATG CCCCGTAC TTTT GTACGGGG TTTGTACTCTGTATT hslV 3635853 - 3636383 + | ATP-dependent protease peptidase subunit hslU 3636393 - 3637724 + | ATP-dependent protease ATP-binding subunit TERM 4562 3637755 - 3637772 + F 100 -9.1 -5.06816 | opp_overlap 3637767, overlap 3637767 TTCATCATTGTTTGA TGGGGCT GAAA GGCCCCA TTTTTATTGGCGCGT menA 3637791 - 3638717 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase menG 3638810 - 3639295 + | ribonuclease activity regulator protein RraA TERM 4563 3639303 - 3639318 + T 100 -10.4 -5.31456 | opp_overlap 3639303 TTGAATGATAAGAAA GGCACC GCAA GGTGCC TTTTTTCTGCGTTAC TERM 4564 3639318 - 3639303 - T 93 -10.4 -4.3953 | opp_overlap 3639303 TTGAATGATAAGAAA GGCACC GCAA GGTGCC TTTTTTCTGCGTTAC yiiU 3639625 - 3639380 - | hypothetical protein TERM 4565 3639499 - 3639515 + g 74 -2.9 -5.01858 | GCTGGGCATTTTGAA CTTCCTG CGA CAGTGAG TTGTTTTTTTCTTTC glpF 3640051 - 3640695 + | glycerol diffusion facilitator protein TERM 4566 3641058 - 3641034 - g 72 -8.7 -3.76492 | overlap 3641048 GCGAATTTGAGCAAA TCTACCCAA AACCAGG TTGGGTAGA ACACGACCCAATGGA TERM 4567 3641945 - 3641935 - g 72 -6.8 -4.25074 | opp_overlap 3641935, overlap 3641927 CACCAAAGTGCAAAA CACC AAT GGTG TGTATGTGGTTCCGG TERM 4568 3642399 - 3642386 - g 74 -3.1 -5.02074 | gap 1, overlap 3642395 GCAGGCTGGAAAAAA GCG-GT CAA ACGCGC GATGGCGTGGGAAGA glpK 3640919 - 3642427 + | glycerol kinase TERM 4569 3642592 - 3642569 - f 79 -10.2 -3.5944 | overlap 3642570 ACGCAGACTCTGAAA CCGTGCGGGG GCAA CCCCGCACAC ATCAATAATCCCACC TERM 4570 3642591 - 3642570 - f 83 -13.7 -2.75343 | overlap 3642569 CGCAGACTCTGAAAC CGTGCGGGG GCAA CCCCGCACA CATCAATAATCCCAC TERM 4571 3642764 - 3642746 - g 95 -9.5 -4.83169 | opp_overlap 3642756 3642757 ACGCGGCGATAAAAA CACCGCG GACGG CGCGGCG GTAAACGCCATGCGT glpX 3642657 - 3643667 + | fructose 1,6-bisphosphatase II TERM 4572 3643688 - 3643709 + F 100 -13.1 -5.7946 | TTGATCGATTGAGCC TTCCAGTCC TTCG GGACTGGAA TTTTTTTGTTCGGAG TERM 4573 3644040 - 3644054 + G 70 -5.7 -4.33417 | GTGCAGGTGGTTAGC GAAGC AGCTG GCTTC TTTGTTCTGGATGAA TERM 4574 3644484 - 3644444 - g 72 -10.3 -3.35224 | overlap 3644442 ACAGTTGCTGAAAGA GACCCGGCAGATGACGAAA CAT TTACGTCGCCGACCGGGCC ATATGACAGCGGAGC fpr 3643764 - 3644510 + | ferredoxin-NADP reductase yiiT 3644943 - 3644515 - | universal stress protein UspD TERM 4575 3644678 - 3644694 + g 70 -3.6 -4.66537 | overlap 3644680 3644685 GTTTCCGGCATTTCT CCGCGT TCAAT ACGCAG TTTTGTCTTCGGCCA TERM 4576 3644751 - 3644773 + g 76 -10.8 -3.41024 | opp_overlap 3644765, overlap 3644749 3644766 GCTTGTTATCCGACT TATTCTTCAA CAA TTGAAGAATA TCTTCTGTTGCAGGG yiiS 3645269 - 3644970 - | hypothetical protein TERM 4577 3645453 - 3645406 - H 93 -16 -2.84566 | gap 1, overlap 3645403 AAGAGTTCAGAAGGA TTTTCCGGGTATTGTCATTTGCA TCG TGGAAATAACAAT-CCCGGAAAA AAATAGCAGTAAGAG TERM 4578 3646029 - 3646042 + G 88 -2.3 -5.53436 | TACTGTCAATGAAGC CAGGG TGTA CGCTG TTTTTTCTCTTATGT yiiQ 3646022 - 3646621 + | hypothetical protein tpiA 3646729 - 3647496 + | triosephosphate isomerase TERM 4579 3647506 - 3647528 + T 90 -13.5 -3.6187 | overlap 3647502 GCTTAAGTCTGACAG GTGCCGGAT TTCAT ATCCGGCAC TTACTTTCCTTAACT cdh 3648306 - 3647551 - | CDP-diacylglycerol pyrophosphatase TERM 4580 3648390 - 3648368 - R 93 -6.9 -5.72622 | opp_overlap 3648368 GTGACAAATAAAAAA CCCGGTCGC GAGAA ACCACCGGG TTTGATAATTATCCT sbp 3649402 - 3648413 - | sulfate transporter subunit TERM 4581 3648630 - 3648646 + g 84 -3.6 -5.24129 | overlap 3648619 3648632 TTCAGGTAGGCTTCC GCCACC TCTTT GGTGCC TTTTTTCTCGACCAC TERM 4582 3649536 - 3649520 - R 93 -9.4 -4.7497 | opp_overlap 3649517 3649520 TTGAGGGATTAAAAA GGCGGA AGAAA TCCGCC TCATATTGCTGACAA TERM 4583 3649640 - 3649666 + r 78 -5 -4.96646 | overlap 3649641 TGCAGAATTCATGTA GGCCTGATAAGC GAA GCGCATCAGGCA TTTTTGCTTCTGTCA pfkA 3650666 - 3649722 - | 6-phosphofructokinase TERM 4584 3650028 - 3650039 + g 93 -5.8 -5.22039 | overlap 3650020 3650025 ATGTTCGGTAATCGC CACG ATCG CGTG TTTTTTACCTTTCGC TERM 4585 3650396 - 3650408 + g 77 -3.3 -5.15117 | CGATAACCACCAGCG CGTCG ATA CCACG TTTTTTCAGGTTTTC TERM 4586 3650626 - 3650656 + g 76 -11.1 -3.28924 | opp_overlap 3650615, overlap 3650615 ACAACCCCGCGAATT GCGGCGTTCATGC CTGGC GCATCACCGCCGC TTGTCAACACACCTA fieF 3651767 - 3650865 - | ferrous iron efflux protein F TERM 4587 3651243 - 3651229 - G 72 -10 -3.30106 | overlap 3651207 3651227 3651225 CCCAATGCAAACAGA GCATCG GCG CGATGC CAGCCGTACCAAGAC TERM 4588 3651873 - 3651857 - R 100 -12.3 -5.9873 | TGAGGATAAAAAAAA CCCCACA TCA TGTGGGG GAAGACAGGGATGGT cpxP 3652415 - 3651915 - | periplasmic repressor CpxP cpxR 3652565 - 3653263 + | DNA-binding transcriptional regulator CpxR TERM 4589 3653976 - 3653986 + G 70 -6.8 -4.05389 | overlap 3653949 CATGATGACCTCTCA GCAG CGT CTGC TTTCTGATATCTCTC cpxA 3653260 - 3654633 + | two-component sensor protein TERM 4590 3654623 - 3654641 + T 77 -8.8 -3.86015 | opp_overlap 3654624, overlap 3654624 GGTTGCCGCTGTATA AGCGGAGT TAA ACTCCGCA TTTGTAGGCAGGATA TERM 4591 3654640 - 3654624 - T 81 -12.3 -3.28712 | opp_overlap 3654623 3654624 GTTGCCGCTGTATAA GCGGAGT TAA ACTCCGC ATTTGTAGGCAGGAT TERM 4592 3654624 - 3654640 + T 79 -12.3 -2.91395 | opp_overlap 3654624, overlap 3654623 GTTGCCGCTGTATAA GCGGAGT TAA ACTCCGC ATTTGTAGGCAGGAT TERM 4593 3654701 - 3654715 + T 73 -10 -3.30124 | opp_overlap 3654659, overlap 3654659 CAGGATGCCTGATGC GACGCT GAT AGCGTC TTATCAGGCCTACAC yiiM 3655413 - 3654739 - | hypothetical protein TERM 4594 3655465 - 3655475 + H 71 -6.8 -4.11692 | ATATTTATTTTATGT CAGC CGT GCTG TTTTCGCGGTAAGTA TERM 4595 3655538 - 3655515 - H 95 -13.2 -3.94853 | GAACTCAATAGCAAA CCGGACGAAC GTTA GTTCATCCGG CTGTGGGGATTAGAC S3760 3655640 - 3656005 + | insertion sequence 2 OrfA protein S3761 3655963 - 3656868 + | insertion element IS2 transposase InsD kdgT 3657881 - 3656898 - | 2-keto-3-deoxygluconate permease TERM 4596 3657842 - 3657853 + g 72 -5.8 -4.42386 | opp_overlap 3657827 3657825 GCGGGACGAGCATCA TCCC CCCC GGGA TTTTCTCAATCGAGC TERM 4597 3657997 - 3657984 - R 76 -5.3 -4.79174 | ATTTAATCAATAAAA GTGAT CAAA ATCAC ATCAATTGAAACGCT TERM 4598 3658004 - 3658018 + r 71 -3.6 -4.83169 | CAAAATCACATCAAT TGAAAC GCT GTTTTA TTTTTATAGGACCAT TERM 4599 3658061 - 3658087 + r 78 -5 -5.06451 | opp_overlap 3658065, overlap 3658065 GGAATTGATCACAAA AAAACCACCGCC GTT GGCGATGGTTCA TTTTTTAAGCTGATA TERM 4600 3658083 - 3658065 - R 100 -12.4 -5.67063 | opp_overlap 3658061 3658065 TTGATCACAAAAAAA CCACCGCC GTT GGCGATGG TTCATTTTTTAAGCT TERM 4601 3658065 - 3658083 + r 84 -10.2 -3.93769 | opp_overlap 3658065, overlap 3658061 TTGATCACAAAAAAA CCACCGCC GTT GGCGATGG TTCATTTTTTAAGCT sodA 3658761 - 3658141 - | superoxide dismutase TERM 4602 3658390 - 3658404 + g 75 -5.6 -4.6902 | opp_overlap 3658390 CCAGCCGGAACCAAA GCGGGA AGC TGCCGC TTTTTCAAATTCTGC TERM 4603 3660122 - 3660097 - R 70 -10.5 -2.52464 | opp_overlap 3660094 3660093, overlap 3660102 CTTTCTGCGAATTGA GATGACGCC ACTGGCTG GGCGTCATC CCGGTTTCCCGGGTA rhaR 3661015 - 3660077 - | transcriptional activator RhaR rhaS 3661835 - 3660999 - | transcriptional activator RhaS rhaB 3662123 - 3663592 + | rhamnulokinase rhaA 3663589 - 3664848 + | L-rhamnose isomerase rhaD 3665273 - 3665914 + | rhamnulose-1-phosphate aldolase yiiL 3665924 - 3666238 + | hypothetical protein TERM 4604 3666244 - 3666273 + F 90 -10.7 -4.37198 | overlap 3666246 3666247 CCTGCCGTAATTGCC CAATGTGCCGGAG ATGC CTCCGGCACAATA TTTTAAATTTCGATT TERM 4605 3666246 - 3666271 + F 95 -13.3 -3.78026 | overlap 3666244 3666247 TGCCGTAATTGCCCA ATGTGCCGGAG ATGC CTCCGGCACAA TATTTTAAATTTCGA TERM 4606 3666247 - 3666270 + F 100 -16.8 -2.86093 | overlap 3666246 3666244 GCCGTAATTGCCCAA TGTGCCGGAG ATGC CTCCGGCACA ATATTTTAAATTTCG TERM 4607 3666376 - 3666360 - f 70 -2.3 -5.05228 | AGTAAATCACAAAAA TAATGAA TAA CCCATTA ATGATTCATGTGGTT frvA 3666539 - 3666985 + | putative fructose-like phosphotransferase system subunit EIIA TERM 4608 3667370 - 3667418 + G 78 -9.4 -3.96327 | gap 1, opp_overlap 3667370 3667369, overlap 3667410 3667413 ACAGGAAGTGCAAAG CGGCAGCG-TGATGAGCCACCTG ATGG CGGGCGTCTCTGCGGCGCTGCCG TTTGTCATCGGCGGT frvB 3666996 - 3668447 + | putative PTS transporter components IIBC frvX 3668437 - 3669507 + | putative fructose-specific phosphotransferase system protein FrvX TERM 4609 3669594 - 3669616 + G 74 -10.6 -3.14125 | overlap 3669592 CAACAGACTGGCGTT TCAGGCAGGA CCA TCCTGCGTGA TATTGACTATCTCAA frvR 3669507 - 3670157 + | putative frv operon regulatory protein S3775 3670191 - 3670466 + | IS1 orfA S3776 3670385 - 3670888 + | IS1 orfB TERM 4610 3670953 - 3670919 - T 93 -13.8 -3.5782 | opp_overlap 3670919, overlap 3670922 AATTCACGAAATGAA TAAGTCCTGCAATTTA ATA TATATCGCAGGACTTA TTTTAATTAATTGCT TERM 4611 3670919 - 3670953 + T 100 -11.6 -4.50193 | opp_overlap 3670919 3670922 AATTCACGAAATGAA TAAGTCCTGCAATTTA ATA TATATCGCAGGACTTA TTTTAATTAATTGCT TERM 4612 3670950 - 3670922 - T 87 -11.1 -3.91541 | opp_overlap 3670919, overlap 3670919 TCACGAAATGAATAA GTCCTGCAATTTA ATA TATATCGCAGGAC TTATTTTAATTAATT fdhD 3671793 - 3670960 - | formate dehydrogenase accessory protein TERM 4613 3672443 - 3672433 - g 77 -8.2 -4.10657 | CTACATTGCGCAAAA CGCC GAA GGCG TGACTGTTAACCGCT fdoG 3671987 - 3675037 + | formate dehydrogenase-O, major subunit TERM 4614 3675260 - 3675235 - g 85 -11.3 -3.61715 | gap 1, opp_overlap 3675234 3675235 3675237 TACCGTCGGCAATAA CATTGGGG-TGT ACG ACAACCCCAATG ATTTAAGCGCCAAAT TERM 4615 3675235 - 3675260 + G 73 -11.3 -2.71791 | gap 1, opp_overlap 3675235, overlap 3675234 3675237 TACCGTCGGCAATAA CATTGGGG-TGT ACG ACAACCCCAATG ATTTAAGCGCCAAAT TERM 4616 3675641 - 3675630 - g 70 -5.8 -4.28018 | overlap 3675631 AAGAGTCGATGAAAA CGCT GGCG AGCG AGCGCGTTGCTGAGC fdoH 3675050 - 3675952 + | formate dehydrogenase-O, iron-sulfur subunit fdoI 3675949 - 3676584 + | formate dehydrogenase-O subunit gamma TERM 4617 3676633 - 3676652 + G 86 -10.7 -3.97307 | opp_overlap 3676630 3676633 CGAGCGAGAAACGTA CGGCGGA TATGAT TCCGCCG TTATTGTTCCCTCGG TERM 4618 3676652 - 3676633 - g 70 -10.7 -2.71325 | opp_overlap 3676633, overlap 3676630 CGAGCGAGAAACGTA CGGCGGA TATGAT TCCGCCG TTATTGTTCCCTCGG fdhE 3676581 - 3677510 + | formate dehydrogenase accessory protein FdhE TERM 4619 3677798 - 3677769 - T 77 -10.7 -3.30124 | overlap 3677795 TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACAAC GCGCACGTTGTCAGC TERM 4620 3677818 - 3677829 + T 75 -3 -5.09426 | overlap 3677807 ACGTTGTCAGCAATC TGAT TGAC ATCA TTTTTTCCCATTACC yiiF 3678082 - 3677840 - | hypothetical protein yiiE 3678545 - 3678300 - | hypothetical protein TERM 4621 3678852 - 3678825 - R 72 -10.6 -2.79133 | opp_overlap 3678825, overlap 3678827 TAATCTTTCATCACA GACCGGTCAGTA CTGC CACCAACCGGTC TTTACTTGCTCATCG TERM 4622 3679028 - 3679065 + r 70 -9 -3.38272 | opp_overlap 3679028, overlap 3679039 CGGGTCATAGCAAAA CTCCTGAGCAGGCGGC CACTAT GCCGCTTTCACTGGAG TTCTGAATACTGGTA TERM 4623 3679065 - 3679028 - R 74 -6.8 -4.34402 | opp_overlap 3679028 3679039 CGGGTCATAGCAAAA CTCCTGAGCAGGCGGC CACTAT GCCGCTTTCACTGGAG TTCTGAATACTGGTA S4827 3680342 - 3679197 - | hypothetical protein S4828 3680751 - 3680500 - | hypothetical protein S3784 3680897 - 3681172 + | IS1 orfA S3785 3681091 - 3681594 + | IS1 orfB TERM 4624 3682129 - 3682106 - T 73 -11 -2.61452 | overlap 3682105 3682108 ATGACCGGAATGAAT GAGAGAGGCA GCAC CGCCCCTCTC CATAAGCTACTCTTC yiiD 3683125 - 3682136 - | putative acetyltransferase yihZ 3683559 - 3683122 - | D-tyrosyl-tRNA deacylase rbn 3684428 - 3683556 - | ribonuclease BN yihX 3685021 - 3684422 - | phosphatase yihW 3685905 - 3685120 - | putative DEOR-type transcriptional regulator TERM 4625 3685974 - 3685961 - R 76 -2.4 -5.35222 | AAAAGTGACAAAAAA GATC GGGTTT GATC ACAGTCAGGGATCCC yihV 3686835 - 3685939 - | putative kinase TERM 4626 3686366 - 3686400 + g 71 -2.6 -5.0133 | opp_overlap 3686375 TCCCCGTCCAGAACG GTCATCACACCCGCCT GAC GGGCCAGGGTGAAGGC TTTTTTAGCGCCGTC TERM 4627 3687556 - 3687570 + G 75 -7 -4.36914 | overlap 3687549 CGCTCAATGCGCTTT CGGCAG AAG CCGCCG TTTTGTGCGAAGCCC yihU 3687003 - 3687899 + | putative dehydrogenase yihT 3687923 - 3688801 + | putative aldolase yihS 3688818 - 3690059 + | hypothetical protein TERM 4628 3690098 - 3690072 - f 95 -12.3 -4.15453 | TAACTGATCTGAAAA TAGGGTGCGGG TTTTC CCCTCACCCTA ACCCTCTCCCCAAAG TERM 4629 3690148 - 3690178 + F 79 -11.3 -3.35992 | gap 1, opp_overlap 3690156, overlap 3690149 TGCAGTTTTTGGGTT TGACAT-CAGCCTC ACGG GAGGCTGTATGTCG TTAATTAAGGTGCCT TERM 4630 3690149 - 3690177 + F 78 -12.6 -2.61274 | gap 1, opp_overlap 3690156, overlap 3690148 GCAGTTTTTGGGTTT GACAT-CAGCCTC ACGG GAGGCTGTATGTC GTTAATTAAGGTGCC yihR 3690197 - 3691099 + | putative aldose-1-epimerase yihQ 3691298 - 3693334 + | alpha-glucosidase TERM 4631 3693883 - 3693829 - f 88 -8.4 -4.81083 | gap 1, opp_overlap 3693877, overlap 3693830 GGCAATCACCAAAAA CCCCAACGAACGCGCCTCACTGGCG GCATGG CGTCAGGGCGGCGC-TACGCTGGGC CTGCTGCTGTGCACG TERM 4632 3693882 - 3693830 - f 86 -11.9 -3.47927 | gap 1, opp_overlap 3693877, overlap 3693829 GCAATCACCAAAAAC CCCAACGAACGCGCCTCACTGGCG GCATGG CGTCAGGGCGGCGC-TACGCTGGG CCTGCTGCTGTGCAC TERM 4633 3694412 - 3694434 + F 75 -9.8 -3.53444 | overlap 3694413 CTGGCGTTCTTCGGC TCAGCGCCTG AAC TGGGCGCTGG TTTCCGACACCGTCG TERM 4634 3694413 - 3694433 + F 73 -11.1 -2.71924 | overlap 3694412 TGGCGTTCTTCGGCT CAGCGCCTG AAC TGGGCGCTG GTTTCCGACACCGTC TERM 4635 3694784 - 3694765 - f 74 -5.6 -4.57882 | opp_overlap 3694768, overlap 3694743 3694766 3694768 CGTAATAATAATAAA CGACGCCC TGCG GGGCGTTA TAAGGAGTGATTATG TERM 4636 3694781 - 3694768 - f 71 -9.5 -3.21565 | opp_overlap 3694768, overlap 3694743 3694766 3694765 AATAATAATAAACGA CGCCC TGCG GGGCG TTATAAGGAGTGATT TERM 4637 3694768 - 3694781 + F 73 -9.5 -3.30619 | opp_overlap 3694743 3694768 3694766 3694765 AATAATAATAAACGA CGCCC TGCG GGGCG TTATAAGGAGTGATT TERM 4638 3694864 - 3694846 - g 90 -7.4 -5.00884 | opp_overlap 3694844 ATCTGCGGGAAAAAA TCGCCTAT GGT ATGGGCGA CGTCGGTTCGAATTT yihO 3694797 - 3696200 + | putative permease S3800 3697116 - 3696613 - | IS1 orfB S3801 3697310 - 3697035 - | IS1 orfA yihN 3698397 - 3697339 - | putative resistance protein TERM 4639 3697861 - 3697851 - G 75 -6.8 -4.35474 | CAAAGAAAATAATAA TGCC TAC GGCA ATCACAATAAGGGAA TERM 4640 3698452 - 3698468 + r 78 -6.6 -4.68384 | GCAATAAGATACCGA CCATTC ATATG GAATGG TTTTATTAACTGCGT yihM 3699479 - 3698499 - | hypothetical protein yihL 3700197 - 3699487 - | putative transcriptional regulator TERM 4641 3699650 - 3699660 + g 93 -4 -5.52986 | GGCATTCTGACGGGT TTGA AAA TCAA TTTTTTTACTACCGT TERM 4642 3699756 - 3699740 - G 72 -4.3 -4.63486 | opp_overlap 3699740 AGTTGTTCAATAAAA CCCGGAG CAA CTTCAGG ATTAATATATGTTTC TERM 4643 3700390 - 3700373 - R 100 -11.3 -6.13 | opp_overlap 3700373 ACAGGTAAAAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTATGACTAAA TERM 4644 3700373 - 3700390 + r 100 -11.3 -5.28176 | opp_overlap 3700373 ACAGGTAAAAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTATGACTAAA yihK 3702237 - 3700414 - | GTP-binding protein TERM 4645 3702390 - 3702404 + H 75 -10 -3.481 | opp_overlap 3702383 3702384 3702397, overlap 3702386 3702397 TATCCAAAGGTCATT GCACCA ATA TGGTGC TTAATGTTTCCATTG TERM 4646 3703397 - 3703387 - g 70 -6.8 -4.13945 | ACCTTTATGCCAAAA CCGA TGT TCGG TGATAACGGCTCCGG glnA 3702610 - 3704019 + | glutamine synthetase TERM 4647 3704036 - 3704056 + F 80 -9.6 -3.91911 | overlap 3704037 AGTTGAAGTTGTACT ACCCGGCG CACAA CGCCGGGA TTTAGTTGCCGTGGA TERM 4648 3704037 - 3704055 + F 82 -13.1 -2.94825 | overlap 3704036 GTTGAAGTTGTACTA CCCGGCG CACAA CGCCGGG ATTTAGTTGCCGTGG TERM 4649 3704080 - 3704097 + F 90 -7 -5.28176 | CCGTGGAAACTTTCA GCCCAT CTCTGC ATGGGC TTTTTTCTCCGTCAA TERM 4650 3704632 - 3704620 - g 75 -4.7 -4.83269 | opp_overlap 3704621, overlap 3704611 3704621 ACATGAGATTAAAAA TCCGC TTG GCGGT TTACGTGGCGCGGCG glnL 3704192 - 3705241 + | nitrogen regulation protein NR(II) glnG 3705253 - 3706662 + | nitrogen regulation protein NR(I) TERM 4651 3706950 - 3706931 - T 73 -10 -3.30124 | opp_overlap 3706933 3706934, overlap 3706933 3706934 TCGTAGGCCTGATAA GACGCGAC CAGC GTCGCATC AGGCATCATGCTCAG TERM 4652 3706988 - 3706933 - T 77 -11.2 -3.21924 | gap 1, opp_overlap 3706933 3706934, overlap 3706931 3706934 GTAGGCCTGATAAGA CGCGACCAGCGTCGCATCAGGCATC ATGCTCA GATGCCTGATGCGGCG-TAAACGCC TTATCCGGCCTACAA TERM 4653 3706933 - 3706988 + T 70 -9 -3.30124 | gap 1, opp_overlap 3706931 3706933 3706934, overlap 3706934 GTAGGCCTGATAAGA CGCGACCAGCGTCGCATCAGGCATC ATGCTCA GATGCCTGATGCGGCG-TAAACGCC TTATCCGGCCTACAA TERM 4654 3706934 - 3706987 + T 78 -12.5 -2.57931 | gap 1, opp_overlap 3706931 3706933 3706934, overlap 3706933 TAGGCCTGATAAGAC GCGACCAGCGTCGCATCAGGCATC ATGCTCA GATGCCTGATGCGGCG-TAAACGC CTTATCCGGCCTACA TERM 4655 3706987 - 3706934 - T 86 -14.7 -2.5294 | gap 1, opp_overlap 3706934 3706933, overlap 3706931 3706933 TAGGCCTGATAAGAC GCGACCAGCGTCGCATCAGGCATC ATGCTCA GATGCCTGATGCGGCG-TAAACGC CTTATCCGGCCTACA TERM 4656 3707068 - 3707104 + T 74 -10.3 -3.24735 | gap 1, opp_overlap 3707064, overlap 3707064 3707062 TTCTCAGCACATTGA TGGCGCTTTCGTTTTC TACTTT GTAAACGAA-GCGCCA TTCACTCTTTAAATC hemN 3708486 - 3707113 - | coproporphyrinogen III oxidase TERM 4657 3708513 - 3708570 + r 100 -14.2 -4.36914 | gap 3, overlap 3708515 3708549 3708552 3708555 CCGATGGCGTCTCTG GCGGCTACGGCGTACCGGCGGATG-CCCG TTT CGGGTCATCAGCCGGT-TGC-GCAGCCAC TTTTGTCGCCGCGAC TERM 4658 3708515 - 3708568 + r 90 -15.4 -2.52946 | gap 3, overlap 3708513 3708549 3708552 3708555 GATGGCGTCTCTGGC GGCTACGGCGTACCGGCGGATG-CCCG TTT CGGGTCATCAGCCGGT-TGC-GCAGCC ACTTTTGTCGCCGCG TERM 4659 3708552 - 3708593 + r 72 -10.2 -2.91144 | overlap 3708515 3708513 3708549 3708555 CCCGTTTCGGGTCAT CAGCCGGTTG-CGCAGCCAC TTTT GTCGCCGCGACAACCG-CTG TAGTTTAACGAATAA yihI 3709184 - 3708675 - | hypothetical protein TERM 4660 3709293 - 3709248 - H 100 -19.3 -3.69341 | opp_overlap 3709260, overlap 3709260 TCTAACAGAAAGCAA GCAAAGAAAAAAGGCGACAGA TTAC TCTGTCGCCTTTTTTCCTGAC TCATAACCCTTAACG TERM 4661 3709281 - 3709260 - H 100 -14.5 -5.72053 | opp_overlap 3709260, overlap 3709248 CAAGCAAAGAAAAAA GGCGACAGA TTAC TCTGTCGCC TTTTTTCCTGACTCA TERM 4662 3709260 - 3709281 + H 100 -14.5 -5.1675 | opp_overlap 3709260 3709248 CAAGCAAAGAAAAAA GGCGACAGA TTAC TCTGTCGCC TTTTTTCCTGACTCA yihA 3709766 - 3710398 + | GTPase EngB TERM 4663 3710556 - 3710531 - T 100 -19.1 -5.4505 | opp_overlap 3710524 TCGCCCAATAAAAAA CGCCCCAGTCA TTAC TGACTGGGGCG GCTAAAATATTCAGC polA 3713566 - 3710780 - | DNA polymerase I TERM 4664 3711751 - 3711762 + g 81 -7.2 -4.64334 | CCGACGTTGACGGCG CGCC ACCC GGCG TTTTCTTCAGCGGTT TERM 4665 3712640 - 3712656 + g 70 -3.5 -4.64657 | opp_overlap 3712632, overlap 3712640 3712642 TGCAACACTGGTTTC CTGCGGC TTC GCGGCTG TTTTTGCCCCTTTGG TERM 4666 3712938 - 3712968 + g 76 -3.8 -5.00616 | TACAGCGTATCCAGC CCGCCAAGACCTTG CAG CAATGCCTGCGCGG TTTTTTCACCGACGC TERM 4667 3713172 - 3713185 + g 70 -3.7 -4.66833 | overlap 3713173 CCAGTGCTAATCAGC ACCGG ACGC CCGGC TTTTTCGGCTTCGCG TERM 4668 3713736 - 3713759 + H 78 -6.1 -4.56642 | overlap 3713738 TCGCTTTTAATTTAT TATCATGCT TTTTAC AGCATGATG TTTGTCTTTGTTTTT TERM 4669 3713901 - 3713911 + H 74 -8.2 -4.00756 | TTTCTGCTAAAATCT GCGC CTT GCGC TTCTTTAGTGCACTG TERM 4670 3714000 - 3714020 + G 100 -6.9 -5.4833 | overlap 3714003 TTTTGCTGAGTATCG TATTGACCA TTT TGGTCACTA TTTTTTGTTCCGTCC TERM 4671 3714087 - 3714102 + G 77 -3.2 -5.10601 | overlap 3714088 CTGTGCCAGTCATTT GGCGAA AGGT TTCGCG TTTTTGTGATTTTAT TERM 4672 3714356 - 3714393 + G 70 -6.3 -4.22554 | gap 1 GGCCTGGCGTGCTGG GCGCTGGATATGCCGTTT ATG AAGCGTTAT-TCCCGCGC TTATTTATTACGTCA yihG 3713930 - 3714862 + | putative endonuclease TERM 4673 3714864 - 3714900 + T 83 -8.9 -4.25104 | gap 1, opp_overlap 3714859 3714863 3714864, overlap 3714865 3714866 GTCAGAATAAGTAAG T-TTTACTCGCCTCTG AATGAG CAGAGGCGAGTGAGTA TTTTAATGAACAAAA TERM 4674 3714865 - 3714898 + T 100 -14 -3.73042 | opp_overlap 3714859 3714864 3714863, overlap 3714864 3714866 TCAGAATAAGTAAGT TTTACTCGCCTCTG AATGAG CAGAGGCGAGTGAG TATTTTAATGAACAA TERM 4675 3714866 - 3714897 + T 93 -15.3 -2.83504 | opp_overlap 3714859 3714864 3714863, overlap 3714865 3714864 CAGAATAAGTAAGTT TTACTCGCCTCTG AATGAG CAGAGGCGAGTGA GTATTTTAATGAACA yihF 3716375 - 3714903 - | hypothetical protein TERM 4676 3715907 - 3715922 + g 71 -3.2 -4.85782 | ACGCGAATCGCAATG TCGCTT CCAC GGGCGA TTTATTTTTCGCGGC TERM 4677 3716150 - 3716160 + g 76 -4 -4.91712 | opp_overlap 3716150 GGGAATTAAAAAAGC CTTT GTC AAAG TTTTTATAACTTAAC TERM 4678 3716448 - 3716467 + r 100 -13.6 -4.17516 | opp_overlap 3716448 TAAATAATAAAAAAA GCCCGTGA ATAT TCACGGGC TTTATGTAATTTACA TERM 4679 3716467 - 3716448 - R 100 -13.6 -6.01369 | opp_overlap 3716448 TAAATAATAAAAAAA GCCCGTGA ATAT TCACGGGC TTTATGTAATTTACA dsbA 3717114 - 3716488 - | periplasmic protein disulfide isomerase I yihE 3718117 - 3717131 - | serine/threonine protein kinase TERM 4680 3717160 - 3717172 + g 72 -6.3 -4.31043 | TTAATTGCAAAGGGG GTTCT TGT AGAAC TTTTGCCTGTTCTAT yihD 3718463 - 3718194 - | hypothetical protein mobA 3718533 - 3719117 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 4681 3719122 - 3719112 - g 71 -3.2 -4.7373 | CGATGGCAGGAAAAA CGAT GAT ACCG TTACTCGCCTTTGCC TERM 4682 3719326 - 3719301 - g 100 -14.1 -3.85698 | opp_overlap 3719298, overlap 3719258 CTGGCGCGGTACAAA CCATCGTTGCC AGCC AGCAACGATGG GCCTTGATGACGGAA mobB 3719099 - 3719626 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 4683 3719711 - 3719692 - T 100 -10 -4.7629 | opp_overlap 3719692 TCACCAACGCAAAAA GGCCATCC TGAC GGATAGCC TTTCGCTTAATTTGA TERM 4684 3719858 - 3719879 + T 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4685 3722347 - 3722359 + T 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4686 3722901 - 3722925 + T 71 -8 -3.93061 | gap 1, opp_overlap 3722907 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4687 3722964 - 3723001 + T 93 -6.3 -5.68438 | opp_overlap 3722960 3722966, overlap 3722966 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4688 3722999 - 3722966 - T 75 -6.7 -4.49756 | opp_overlap 3722964 3722966, overlap 3722960 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4689 3722966 - 3722999 + T 86 -8.9 -4.47052 | opp_overlap 3722960 3722966, overlap 3722964 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT hemG 3725753 - 3725208 - | protoporphyrinogen oxidase TERM 4690 3725594 - 3725613 + g 70 -6.4 -4.22338 | opp_overlap 3725597, overlap 3725597 AGCGAATAGAAGCAC CAATGACC ACAC GGTCATAG TTTTCCCATTGTGGT trkH 3727216 - 3725765 - | potassium transporter TERM 4691 3726039 - 3726020 - G 75 -5 -4.84761 | ATAGGCGGAGAAAAA TCCCCAAA CGGC TTCGAGGA TACGTTCCGGCAGTG yigZ 3727869 - 3727255 - | hypothetical protein TERM 4692 3727585 - 3727554 - G 77 -11.6 -3.23853 | opp_overlap 3727553 3727556, overlap 3727552 CGGTGCCAAGCAATA TGCCGCCGTAGTAG CGCA CTACCACAGCGGTA ATTTCCCCGACGCCG pepQ 3729200 - 3727869 - | proline dipeptidase TERM 4693 3729272 - 3729294 + H 72 -4.8 -4.60648 | CCAGAGCGTGATTTC TGCCGAGC GTGATCA GATCGGCA TTTCTTTAATCTTTT TERM 4694 3729585 - 3729605 + G 76 -3.9 -4.91459 | overlap 3729586 AAAGCAGCCTTTATC GTCGGTGCT GAT ATCACCGAA TTTTTGTCCCTGTTC TERM 4695 3730666 - 3730641 - g 79 -4 -5.16151 | gap 1, overlap 3730642 3730644 GAAACCGAACAAAAA GTACGCCAGGA TACCG TGCTGGCGT-C TAACACTTCAACCAT fadB 3729390 - 3731579 + | multifunctional fatty acid oxidation complex subunit alpha fadA 3731589 - 3732752 + | 3-ketoacyl-CoA thiolase TERM 4696 3732844 - 3732811 - T 76 -11.7 -2.56596 | overlap 3732821 3732823 TCCGGCACCAATGTA GGCCTGATAAGACGC GCCA GCGTCGCATCAGGCA TCGTGCACCAATTGC TERM 4697 3732913 - 3732931 + T 100 -9.5 -5.76633 | TTAGTTGCCGTTCTT CCCGCCT GTCAG GGGCGGG TTTTTTTATATCTCA fre 3733645 - 3732944 - | FMN reductase TERM 4698 3733585 - 3733562 - G 79 -3.7 -5.14626 | overlap 3733564 AGCACGAAAAGAAAA GGCCGCGTC TGGCAC GATGCGGAC ACGATATACGGTATC TERM 4699 3733686 - 3733698 + r 72 -6.2 -4.24123 | opp_overlap 3733686 3733685 3733681 TAGGGCAAAACAAAC GCGC ATCAG GCGC TTTTACCGTTGTTAA yigC 3735184 - 3733691 - | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 4700 3734554 - 3734536 - G 70 -6.6 -4.04206 | CCAGCGCCACAGAAA CCGGGAAA CGT TCGCCCGG ATGCGCCGCACACCA TERM 4701 3734772 - 3734784 + g 85 -3.3 -5.4505 | overlap 3734767 TTGAGATCGACGTCA TCGCC AGA GACGA TTTTTTGTTGGCAGG TERM 4702 3735568 - 3735581 + G 72 -8.1 -3.95219 | CCATCAGCGCTACGC GTGGC GTCA GCCAC TTTGTGCGCTTTGGC rfaH 3735351 - 3735839 + | transcriptional activator RfaH yigW 3736618 - 3735836 - | DNase TatD TERM 4703 3736633 - 3736658 + r 86 -8.9 -4.49364 | opp_overlap 3736635 3736638, overlap 3736634 3736635 3736638 TCCTGTACTCCATAT GACAACCGCCC TGAC GGGCGGTTGAA TTTATTCTTCAGTTT TERM 4704 3736634 - 3736657 + r 81 -12.4 -3.27992 | opp_overlap 3736635 3736638, overlap 3736633 3736635 3736638 CCTGTACTCCATATG ACAACCGCCC TGAC GGGCGGTTGA ATTTATTCTTCAGTT TERM 4705 3736656 - 3736635 - R 90 -15.9 -2.63596 | opp_overlap 3736634 3736633 3736635 3736638, overlap 3736638 CTGTACTCCATATGA CAACCGCCC TGAC GGGCGGTTG AATTTATTCTTCAGT TERM 4706 3736635 - 3736656 + r 90 -15.9 -2.5571 | opp_overlap 3736635 3736638, overlap 3736634 3736633 3736638 CTGTACTCCATATGA CAACCGCCC TGAC GGGCGGTTG AATTTATTCTTCAGT TERM 4707 3736638 - 3736653 + r 82 -11.8 -3.41554 | opp_overlap 3736635 3736638, overlap 3736635 3736634 3736633 TACTCCATATGACAA CCGCCC TGAC GGGCGG TTGAATTTATTCTTC TERM 4708 3736653 - 3736638 - R 82 -11.8 -3.47078 | opp_overlap 3736638 3736635 3736634 3736633, overlap 3736635 TACTCCATATGACAA CCGCCC TGAC GGGCGG TTGAATTTATTCTTC yigU 3737436 - 3736660 - | TatABCE protein translocation system subunit TERM 4709 3737098 - 3737086 - G 70 -4.8 -4.53303 | overlap 3737095 CATGCCGATATAAAA CAGC AGAGA GCTG GAAACCAGCAGCGGC S3838 3737954 - 3737439 - | sec-independent translocase tatA 3738269 - 3737958 - | twin argininte translocase protein A ubiB 3739946 - 3738306 - | putative ubiquinone biosynthesis protein UbiB TERM 4710 3739827 - 3739864 + g 83 -9.9 -4.1196 | gap 1, opp_overlap 3739827 3739830 TGGCATCCAGAATAA TGAGTATCGCCATAGCCG TAG CGGC-AGGGTGATACGCA TTTTGGGGATCAGTT yigP 3740548 - 3739943 - | hypothetical protein TERM 4711 3740402 - 3740380 - G 76 -10.6 -3.29471 | overlap 3740381 CGCCCAGTACATCAA CCTGGCGTTC GCT GAACACCAGA ATCAATGACGTCGAA TERM 4712 3740401 - 3740381 - G 73 -11.9 -2.57468 | overlap 3740380 GCCCAGTACATCAAC CTGGCGTTC GCT GAACACCAG AATCAATGACGTCGA ubiE 3741317 - 3740562 - | ubiquinone/menaquinone biosynthesis methyltransferase yigN 3742824 - 3741412 - | DNA recombination protein RmuC TERM 4713 3742224 - 3742238 + g 85 -7.1 -4.78839 | TCAATACTACCTCGC CCCAG TTGCC CTGGG TTTTATTGTCGCCTT TERM 4714 3742960 - 3742944 - R 100 -9.4 -4.98672 | CGCAAAAATACAAAA GGCCGA ACGCG TCGGCC TTCAGACAGGAGAAG udp 3743741 - 3742980 - | uridine phosphorylase TERM 4715 3743890 - 3743868 - R 72 -6.4 -4.28548 | opp_overlap 3743868 ATTTACCCACCAAAA GTGATTCATA TCA CATAAATCAC TCTTCATTCTGCAGG S3847 3744419 - 3744111 - | hypothetical protein TERM 4716 3744850 - 3744826 - R 100 -14.3 -4.5442 | opp_overlap 3744828, overlap 3744828 GCTGTAATGAGAAAA GACCGGGTGGT ATT ACCACCCGGTT TGGATTTACCCCCGA TERM 4717 3744828 - 3744848 + r 100 -16.9 -3.84451 | opp_overlap 3744826 3744828 TGTAATGAGAAAAGA CCGGGTGGT ATT ACCACCCGG TTTGGATTTACCCCC TERM 4718 3744848 - 3744828 - R 100 -16.9 -3.8823 | opp_overlap 3744828, overlap 3744826 TGTAATGAGAAAAGA CCGGGTGGT ATT ACCACCCGG TTTGGATTTACCCCC metE 3747117 - 3744856 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 4719 3744904 - 3744929 + g 74 -7.5 -4.07687 | overlap 3744897 CATGTTCGCCAGTGC CGCGCGGGT TTCTGGCC AGCCGCGCG TTTTCAGGCCACAGT TERM 4720 3746047 - 3746061 + g 78 -5.7 -4.82901 | CGCATCGCGCAGCAG TGCCA GTTCA TGGCA TTTTTGTAGGGCGAA TERM 4721 3746940 - 3746962 + g 70 -4.1 -4.71426 | gap 1, opp_overlap 3746931, overlap 3746943 CAAAATCGCCCACCG GC-AGCAGGT CGAT ACCCGCTTGC TTTTGTTGATCCCAG TERM 4722 3747388 - 3747378 - gR 74 -6.8 -4.23434 | overlap 3747379 3747387 TAAAACACCTGAAAA CGCT ACA AGCG TTGCGGAACTGCGGC yigM 3749093 - 3748194 - | hypothetical protein metR 3747353 - 3748306 + | regulator for metE and metH TERM 4723 3749132 - 3749088 - GT 77 -10.2 -3.47322 | gap 1 GGTGATGATAAGTAA CGCCACAATGGAAAACTCTTT GATT AACGAGTAT-CCATTGTAGCG AAGTATCAGGTTGAC yigL 3749969 - 3749169 - | putative sugar phosphatase pldB 3750999 - 3749977 - | lysophospholipase L2 TERM 4724 3750044 - 3750029 - G 74 -3.2 -5.00616 | opp_overlap 3750037 3750039 TGCCTGTTGAAAAAA TCAACG ATGG CGTGGA GCGCGACTGAGCGCA yigK 3751314 - 3751730 + | hypothetical protein TERM 4725 3751771 - 3751735 - T 89 -8.8 -4.58395 | gap 1, opp_overlap 3751739 3751748, overlap 3751739 GGCATGCGTGAAAAA TAATGTCGGATGCGGCG TAAA CGCCTTATCCGAC-TTA CTCTGAAGACGCGTC TERM 4726 3751739 - 3751768 + T 90 -14.3 -3.25823 | opp_overlap 3751735 3751739, overlap 3751748 TGCGTGAAAAATAAT GTCGGATGCGGCG TAAA CGCCTTATCCGAC TTACTCTGAAGACGC TERM 4727 3751768 - 3751739 - T 79 -12.1 -3.23855 | opp_overlap 3751739 3751748, overlap 3751735 TGCGTGAAAAATAAT GTCGGATGCGGCG TAAA CGCCTTATCCGAC TTACTCTGAAGACGC yigJ 3752160 - 3751792 - | hypothetical protein recQ 3754311 - 3752476 - | ATP-dependent DNA helicase RecQ TERM 4728 3752675 - 3752691 + g 71 -9.5 -3.5394 | opp_overlap 3752674 TCATCGGCAATCGAT TTACGCA GTT TGCGTAA TTTGGCGAACAGTTT TERM 4729 3754354 - 3754333 - R 100 -12.3 -5.27335 | overlap 3754327 TGCCTGAAATAAAAA CAGGCGCTA TTTT CAGCGCCTG CGCGAGAAACTGCAA pldA 3755307 - 3754438 - | phospholipase A yigI 3755472 - 3755939 + | hypothetical protein TERM 4730 3755962 - 3755950 - f 72 -4.8 -4.67943 | opp_overlap 3755950, overlap 3755945 3755953 GTTGAAGACATAAAA GCAG GTAAA CTGC TGTTACCAATTAAAA TERM 4731 3756005 - 3756040 + G 74 -3.2 -4.89521 | gap 1, opp_overlap 3756007 3756008, overlap 3756008 GATGGATGCAAAACA AACGCGGCAGG-GCG TATTACT CGCTCTTGCCGCTTA TTTTATTTGGGGTAT TERM 4732 3756038 - 3756007 - g 70 -3.6 -4.68908 | gap 1, opp_overlap 3756005 3756008, overlap 3756008 TGGATGCAAAACAAA CGCGGC-AGGGCG TATTACT CGCTCTTGCCGCT TATTTTATTTGGGGT TERM 4733 3756008 - 3756037 + G 90 -9.3 -4.54026 | gap 1, opp_overlap 3756007 3756008, overlap 3756005 GGATGCAAAACAAAC GCGGCAGG-GCG TATTACT CGCTCTTGCCGC TTATTTTATTTGGGG TERM 4734 3756095 - 3756128 + G 85 -3.1 -5.40464 | gap 1, overlap 3756106 TTACTACGTGCCCGC CGATGAGATCCTGACG CAT CG-CGTGATCTGGTCG TTTTTCTTTATGGTG TERM 4735 3756414 - 3756427 + G 75 -6.7 -4.43477 | ATATGTGGCGTGTTG GTCCA GCTG TGGAC TTTTGGTTCGCTACC TERM 4736 3756697 - 3756719 + G 74 -2 -5.10497 | gap 1, overlap 3756686 CTGCCGCTGCCACGC GCCT-GCGT CTCTCA ACGTTAGGC TTTTTTCAGTACATT TERM 4737 3756793 - 3756783 - g 72 -4.6 -4.59773 | TTTTATGGTGAAAAA CCGG GTG CCGA TAAGATGGTGACTTT TERM 4738 3756800 - 3756812 + G 82 -7.7 -4.46112 | opp_overlap 3756799 3756800 GGGTGCCGATAAGAT GGTGA CTT TCACC TTTATTTGGGTGGCG rarD 3755991 - 3756881 + | hypothetical protein TERM 4739 3756934 - 3756905 - f 100 -9.4 -5.04385 | opp_overlap 3756907, overlap 3756892 TATATTCTGAAAAAA TATGCCGACTCT TGTATG AGAGTGGGCATA TTGCCATGCTGACAG yigG 3756940 - 3757356 + | hypothetical protein yigF 3757370 - 3757750 + | hypothetical protein TERM 4740 3757749 - 3757787 + T 78 -6.1 -4.57341 | gap 2, opp_overlap 3757755 3757757, overlap 3757754 3757755 3757756 ATACCTGGAGCCTTT GAATAACAGGTGGCTTAGC CAG GCTAAGCCACC-GCC-TTC TTTTTACAACCAGTT TERM 4741 3757754 - 3757784 + T 81 -8.2 -4.40561 | opp_overlap 3757755 3757757, overlap 3757749 3757755 3757756 TGGAGCCTTTGAATA ACAGGTGGCTTAGC CAG GCTAAGCCACCGCC TTCTTTTTACAACCA TERM 4742 3757755 - 3757783 + T 79 -11.7 -3.23855 | opp_overlap 3757755 3757757, overlap 3757754 3757749 3757756 GGAGCCTTTGAATAA CAGGTGGCTTAGC CAG GCTAAGCCACCGC CTTCTTTTTACAACC TERM 4743 3757782 - 3757755 - T 100 -15 -3.62046 | gap 1, opp_overlap 3757755 3757754 3757749 3757756, overlap 3757757 GGAGCCTTTGAATAA CAGGTGGCTTAGC CAG GCTAAGCCACC-G CCTTCTTTTTACAAC TERM 4744 3757756 - 3757782 + T 90 -15.2 -2.53831 | opp_overlap 3757755 3757757, overlap 3757755 3757754 3757749 GAGCCTTTGAATAAC AGGTGGCTTAGC CAG GCTAAGCCACCG CCTTCTTTTTACAAC TERM 4745 3757781 - 3757757 - T 100 -18.7 -3.38991 | opp_overlap 3757756 3757755 3757754 3757749, overlap 3757755 AGCCTTTGAATAACA GGTGGCTTAGC CAG GCTAAGCCACC GCCTTCTTTTTACAA corA 3758741 - 3757791 - | magnesium/nickel/cobalt transporter CorA TERM 4746 3759104 - 3759091 - H 86 -3.1 -5.70829 | overlap 3759080 AACAGGATAAAAAAA TCCCA CATC TAGGA CCTATAATGGCGCAT yigE 3759111 - 3759449 + | hypothetical protein TERM 4747 3759449 - 3759478 + T 89 -9.3 -4.59109 | overlap 3759451 TCAGCAGAAGGTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4748 3759451 - 3759476 + T 100 -16.3 -3.90762 | overlap 3759449 AGCAGAAGGTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S3863 3760788 - 3759460 - | IS4 orf TERM 4749 3760796 - 3760821 + H 72 -9.1 -3.61398 | opp_overlap 3760796 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4750 3760821 - 3760796 - H 100 -9.8 -5.61596 | opp_overlap 3760796 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4751 3761116 - 3761130 + G 79 -3.5 -5.06414 | GTTGGGATTAATAAA CATGG GAATG CCGTG TTTTTGTTGAGCCAG S3864 3761014 - 3761313 + | hypothetical protein TERM 4752 3761446 - 3761434 - T 77 -9.1 -3.9392 | TTTTAGGCCAAATAA GGTGC GCA GCACC GCATCCGGCAACGTT uvrD 3763622 - 3761460 - | DNA-dependent helicase II TERM 4753 3763572 - 3763550 - G 71 -9 -3.44051 | opp_overlap 3763558 CCGCCAGCACCAGAA GGTTGCTGCG TGG CGCGGCCACC GCTTCGCGTTGTTTG TERM 4754 3763558 - 3763580 + g 82 -9 -4.1523 | opp_overlap 3763550 ACCAGAAGGTTGCTG CGTGGCGCGG CCA CCGCTTCGCG TTGTTTGTCATTAAG yigB 3764422 - 3763706 - | flavin mononucleotide phosphatase xerC 3765318 - 3764422 - | site-specific tyrosine recombinase XerC TERM 4755 3764734 - 3764703 - G 79 -5 -4.96848 | overlap 3764678 3764728 GTTTCGACAGAAAAA GCGCGTCGTCTTCG CTAC CAAACAGGTCGCGC AAATCAAGCCAGTGC TERM 4756 3764964 - 3764980 + g 72 -5.1 -4.57569 | opp_overlap 3764949 CCAGCAGCCGATTCA TATCGTC GAC GTCGATA TTTTTCGGCAGATGA yigA 3766022 - 3765315 - | hypothetical protein TERM 4757 3765867 - 3765904 + g 76 -12.8 -2.64099 | gap 1, opp_overlap 3765867 3765872, overlap 3765866 GTGCCACTCGACCAA CGAAACG-GTGCCGCGT ACCGG ATGCGGCACACGTATCG CTTCTACTGCGCGCG TERM 4758 3765904 - 3765867 - G 74 -10.6 -3.16564 | gap 1, opp_overlap 3765867 3765866, overlap 3765872 GTGCCACTCGACCAA CGAAACG-GTGCCGCGT ACCGG ATGCGGCACACGTATCG CTTCTACTGCGCGCG TERM 4759 3765899 - 3765872 - G 72 -7.7 -3.95852 | gap 1, opp_overlap 3765867 3765866, overlap 3765867 ACTCGACCAACGAAA CG-GTGCCGCGT ACCGG ATGCGGCACACG TATCGCTTCTACTGC dapF 3766843 - 3766019 - | diaminopimelate epimerase yifL 3767083 - 3766880 - | putative outer membrane lipoprotein S3871 3767386 - 3768423 + | hypothetical protein S3874 3770162 - 3769659 - | IS1 orfB S3875 3770356 - 3770081 - | IS1 orfA cyaY 3770885 - 3771205 + | frataxin-like protein cyaA 3773791 - 3771245 - | adenylate cyclase TERM 4760 3771629 - 3771649 + g 75 -6.8 -4.30987 | overlap 3771625 GTGATTGGTTTCAAC CTGCACTG ACAAG CCGTGCAG TTTGTTATGCGAAAT TERM 4761 3771784 - 3771768 - G 71 -9.3 -3.53811 | CGCAGCGCCTTGAAA CGCCCGG TTT CCTGGCG GGTGCTGGAAAGGCG TERM 4762 3773292 - 3773315 + g 76 -7.4 -4.2828 | TCGCCCCCCAGGCTG CCGCTTTCAT TATG ACGGAAGCGG TTTTCATCAATCAGG hemC 3774178 - 3775119 + | porphobilinogen deaminase hemD 3775116 - 3775856 + | uroporphyrinogen-III synthase TERM 4763 3776132 - 3776121 - g 70 -3.6 -4.62336 | ACGGCATTGCAAAAA GCCC AGGA GAGC CAAAAAGCCGAGCTG TERM 4764 3776265 - 3776240 - g 70 -3.9 -4.68103 | overlap 3776242 TGAAGTCCAACAAAA GATCGCCACCA TTTC CGGCAGCGATG CTAAAACCTGGCTGC hemX 3775878 - 3777077 + | putative uroporphyrinogen III C-methyltransferase hemY 3777080 - 3778276 + | putative protoheme IX biogenesis protein TERM 4765 3778356 - 3778331 - f 100 -11.9 -5.64274 | TGATGCATAAAAAAA CGCCTGCTC TTATTACG GAGCAGGCG TTAAAACAGGTCTGT TERM 4766 3778838 - 3778848 + F 72 -2.6 -4.91459 | opp_overlap 3778838 CATTTTCTGGATAAA TAAA TAA TTTA TTTTTGTCACTATTA S3883 3779138 - 3779503 + | insertion sequence 2 OrfA protein S3884 3779461 - 3780366 + | insertion element IS2 transposase InsD TERM 4767 3780513 - 3780531 + T 84 -5.2 -5.37865 | GGCAATCAACCGCAG GCGGCT TCCAAAT GGCCGC TTTTTTACTTATTCA aslB 3781771 - 3780536 - | putative arylsulfatase regulator TERM 4768 3781909 - 3781894 - R 100 -11.8 -5.8901 | ACAGAAAACAAAAAA CCCCGC CGAA GCGGGG TTCAAAATTGGTCGG yifK 3783842 - 3782457 - | putative transport protein YifK TERM 4769 3782879 - 3782895 + g 72 -5.7 -4.58395 | AAACTTTTGCCATTG CCGCCGG TAA CTGACGG TTTTTCGCCAGTGCG TERM 4770 3783350 - 3783370 + g 71 -10.5 -2.87051 | opp_overlap 3783350, overlap 3783349 CCAGGCCAATGACAA TCATCACGA TAA TCGTGGTGA CTTTGATCATCGCGA TERM 4771 3783516 - 3783506 - G 77 -8.2 -4.08164 | opp_overlap 3783505 3783502 AAAACTGGACATAAA CGCC AAT GGCG GTGATTTCTGAGATC TERM 4772 3783871 - 3783883 + r 72 -9.1 -3.57039 | GTGTTTGCATGCTTT CCGGT GTT ACCGG TTATCGTTATGGGTA TERM 4773 3784015 - 3783990 - R 71 -9.7 -3.18764 | opp_overlap 3783991, overlap 3783988 3783986 ATAAAAAAGCAGACA GGCGACGAAGT GACC ACTCCGTCGCT TTACAAAGAGAGGAA TERM 4774 3783991 - 3784014 + r 82 -11 -3.53012 | opp_overlap 3783990 3783988 3783986 TAAAAAAGCAGACAG GCGACGAAGT GACC ACTCCGTCGC TTTACAAAGAGAGGA wecG 3784773 - 3784033 - | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4775 3784493 - 3784528 + g 77 -6 -4.68593 | gap 1, opp_overlap 3784512, overlap 3784496 TCTTCCCAGAGATCG GCACCGGCA-ACGCGGG AAA CCTGCGCCTGCGGGTAC TTTTTACGTACTGAA wecF 3786128 - 3784776 - | putative entero common antigen polymerase TERM 4776 3785595 - 3785580 - G 71 -3.2 -4.77036 | GCTGACGAGGAAAAA CAGCCA CGCT TTGCTG TCCTGGCGCAGAAAG TERM 4777 3785663 - 3785646 - G 71 -3.3 -4.80167 | overlap 3785649 GATGAAAAAGTAAAA GAAGCGT TTTA ACGCCAC GCCGGAGACTTCACT TERM 4778 3785660 - 3785649 - G 74 -5.8 -4.47007 | overlap 3785646 GAAAAAGTAAAAGAA GCGT TTTA ACGC CACGCCGGAGACTTC yifM 3787204 - 3786125 - | 4-alpha-L-fucosyltransferase TERM 4779 3786735 - 3786750 + g 70 -6.8 -4.07568 | overlap 3786711 TACAGCAGTTCTCCC CGCACC TTTG GGTGTG TTTTGGCAAAAAAGC TERM 4780 3786849 - 3786835 - G 71 -2.1 -5.02074 | GTAGTGGGTAAAAAA GCTTA TATCT CAAGC CACTGGAAAGCTCAT TERM 4781 3786931 - 3786896 - G 85 -6.8 -4.8667 | overlap 3786885 GATATGCCAGAAAAA CTGGCTGGGCTTAATG CCAC CACTCAGCAGAGCCAG CCACAGTGTGGGATT TERM 4782 3787152 - 3787142 - G 72 -4.6 -4.65895 | overlap 3787151 CGCGTCATTGAAAAA CCGC AAA ACGG TTCGGTTATGGTGAG wzxE 3788451 - 3787201 - | putative cytochrome TERM 4783 3788337 - 3788317 - G 76 -11.1 -3.36289 | GAGCACGGTAATCAA CTGGCGGAA ATT TGCCGCCAG CCCAAGCCCCGCCGG wecE 3789583 - 3788453 - | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 4784 3789484 - 3789456 - G 81 -9.6 -4.07568 | gap 1, opp_overlap 3789437, overlap 3789437 TTGGCGCTGCCAAAA CGTTGCT-CCAGC CACT GCTGGCAGCGACG GGTAAAACCGCCATC wecD 3790133 - 3789588 - | TDP-fucosamine acetyltransferase TERM 4785 3789863 - 3789876 + g 76 -8.1 -4.19258 | opp_overlap 3789862 3789861 ATTGATGATCAAAGG TGCCG CGCA CGGCA TTTTCAATCCACTGT rffH 3791121 - 3790240 - | glucose-1-phosphate thymidylyltransferase TERM 4786 3790869 - 3790855 - G 72 -7.8 -3.97947 | opp_overlap 3790860 TTCACCGATGATAAA GGCCTG CGC CAGACC GTCCGGGCTGGGCTG rffG 3792207 - 3791140 - | dTDP-glucose 4,6-dehydratase TERM 4787 3791685 - 3791715 + g 74 -7.5 -4.07885 | gap 1 GACCGTAGGTCCGCA GCCAGGCGCGCACC AGAT GGT-CGCTGCTGGC TTTTGACGCGGAATA wecC 3793469 - 3792207 - | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 4788 3792814 - 3792799 - G 70 -5.4 -4.31692 | AATTCATTAGCAAAA GCGATA TTCA CATCGC GGAAGCTGTTTTCGG TERM 4789 3793291 - 3793276 - G 76 -3.9 -5.00616 | CTCGCTCGTAAAAAA CCGCC TTCTAC GGCAG TTTTTACTACGCTCG wecB 3794638 - 3793466 - | UDP-N-acetyl glucosamine-2-epimerase TERM 4790 3793905 - 3793923 + g 78 -8.9 -4.15044 | TGCGTGGTGGCGATG TCTGCCA GCGCG TGGCAGA TTTCTTCAAAGCCAC TERM 4791 3794641 - 3794616 - G 100 -18.3 -3.61517 | opp_overlap 3794613 3794636 3794640 ATTCTCTTCGAATAA GCGGCGAGCGC CTTT GCGCTCACCGC AGCAGTGTTGCTATT wzzE 3795698 - 3794652 - | lipopolysaccharide biosynthesis protein WzzE TERM 4792 3795284 - 3795304 + g 72 -11.1 -3.02144 | opp_overlap 3795288 3795289, overlap 3795289 TAATCATTTCATCCA GCAACGCCG CAT CGGCTTTGC TGTTGCCCACCATCC TERM 4793 3795289 - 3795299 + g 74 -8.2 -3.92324 | opp_overlap 3795289 3795288, overlap 3795284 ATTTCATCCAGCAAC GCCG CAT CGGC TTTGCTGTTGCCCAC rfe 3796813 - 3795710 - | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase TERM 4794 3795747 - 3795757 + g 70 -6.8 -4.11751 | overlap 3795755 CCACCACGATTTCTA CGCA GTC TGCG TTTTACGCGCTTAAT TERM 4795 3796372 - 3796334 - G 89 -14 -3.14881 | opp_overlap 3796342, overlap 3796342 3796369 CAACCCGCCCAGCAA GCCATCAATGCCATCAAC CAT GTTGAACGCATTAATGGC CGCCCAGACGGCAAA TERM 4796 3796793 - 3796777 - G 100 -8.1 -5.7946 | TCGTGAATAAAAAAA TACTGAT GAG ATCAGTA CTCACTGTCAGTAAA TERM 4797 3797038 - 3797009 - R 90 -13.7 -3.38183 | opp_overlap 3797014, overlap 3797014 TTACAGATATAAAAG CAAAACGCCACGT AAAC ACGTGGCGTTTTT GGCATAAGACAAATT TERM 4798 3797014 - 3797033 + r 100 -13.6 -4.62069 | opp_overlap 3797009 3797014 GATATAAAAGCAAAA CGCCACGT AAAC ACGTGGCG TTTTTGGCATAAGAC TERM 4799 3797033 - 3797014 - R 100 -13.6 -4.75518 | opp_overlap 3797014, overlap 3797009 GATATAAAAGCAAAA CGCCACGT AAAC ACGTGGCG TTTTTGGCATAAGAC rho 3798312 - 3797053 - | transcription termination factor Rho TERM 4800 3797909 - 3797921 + g 70 -4.1 -4.63486 | TGCAGCGGGGTTAAG TTCTC AAA GAGGA TTTTGTTGCGGGCGT rhoL 3798498 - 3798397 - | putative Rho operon leader peptide trxA 3799022 - 3798639 - | thioredoxin TERM 4801 3799847 - 3799829 - g 100 -7.4 -5.5604 | overlap 3799830 CTAACGAAGAAAAAA TGCGTTTG CTG CAAACGCT GATCGAAGAAGAGTG TERM 4802 3799846 - 3799830 - g 86 -10.9 -3.91997 | overlap 3799829 TAACGAAGAAAAAAT GCGTTTG CTG CAAACGC TGATCGAAGAAGAGT rhlB 3799099 - 3800364 + | ATP-dependent RNA helicase RhlB TERM 4803 3801303 - 3801320 + G 93 -9.9 -4.57569 | TGTTCCCGAGTGGTC TGGCGAT CCTG ATCGCCA TTTTTACCGAACTGA TERM 4804 3801964 - 3801940 - g 70 -6.5 -4.2558 | gap 1 TATTGCTCAGGAAAA CCAGTGG-CA GAGCTA TGTCCACTGG CCGCTGGAAGTGCAT gppA 3800498 - 3801982 + | guanosine pentaphosphate phosphohydrolase TERM 4805 3801992 - 3802023 + T 72 -10.8 -2.76911 | opp_overlap 3801990 3801991, overlap 3801991 3801987 3801987 3801983 CATTAATGAGTAAGT GCCGGATGCGATGC TGAC GCATCTTCTCCGGC CTTGATTATTTCCCT rep 3804050 - 3802029 - | ATP-dependent DNA helicase Rep TERM 4806 3802193 - 3802208 + g 81 -10.4 -3.90922 | CCGGGCGCACCAGTT CGCCGT ACTG ACGGCG TTCTTTACACAGCGT TERM 4807 3802512 - 3802539 + g 84 -10.6 -3.72592 | GCCTTCCAGCATCTC CGTCATCCAGCT AAAC AGTTGGTTGACG TTCTTCATGCGCATT TERM 4808 3803406 - 3803428 + g 71 -2.7 -4.77165 | gap 1 GTTGGTGTCCTGATA TTCGTCCACC AGCA GGTAG-CGAA TTTTGTTCTGCCAGC ppiC 3804137 - 3804418 + | peptidyl-prolyl cis-trans isomerase C (rotamase C) TERM 4809 3804449 - 3804421 - T 100 -16.1 -3.24825 | overlap 3804422 3804425 GTACCGTAACTAATA GCAAGGCCTTCTC CGG GAGAAGGCCTTGA ACTCTGAATCGCTAT TERM 4810 3804448 - 3804422 - T 100 -19.6 -2.54574 | overlap 3804421 3804425 TACCGTAACTAATAG CAAGGCCTTCTC CGG GAGAAGGCCTTG AACTCTGAATCGCTA TERM 4811 3804445 - 3804425 - T 100 -15.5 -3.42147 | overlap 3804422 3804421 CGTAACTAATAGCAA GGCCTTCTC CGG GAGAAGGCC TTGAACTCTGAATCG ilvC 3805939 - 3804464 - | ketol-acid reductoisomerase TERM 4812 3806123 - 3806138 + G 83 -10.4 -4.07568 | opp_overlap 3806111 3806112 3806132 AAACCTTCCTGCATC TGGCGG AAAG CCGCCA TTTTGGCCGCAGCGC TERM 4813 3806197 - 3806229 + G 72 -7.6 -3.86897 | CTCTCACGGCAGATT CAGCGCCTGGAAGA AGATC TCGGCCAGCCGCTG TTTGTGCGCGATAAC TERM 4814 3806941 - 3806925 - g 95 -9.4 -4.82901 | opp_overlap 3806925 3806937, overlap 3806937 GTGTGCGCAGAAAAA GCGGCT ACATG AGCCGC TAATTGAGGCATTCT ilvY 3806089 - 3806979 + | DNA-binding transcriptional regulator IlvY ilvA 3808520 - 3806976 - | threonine dehydratase TERM 4815 3808253 - 3808236 - G 71 -3.3 -4.77165 | gap 1, opp_overlap 3808238, overlap 3808238 CCGCGCAGAAGAAAA CGCGACGC CCT GCG-CGTG GTTACCCGCAGAAGC TERM 4816 3808276 - 3808286 + g 79 -2.4 -5.30348 | GCAGAAGCAGTGATC ACGC CGT GCGC TTTTTGTTCTTCCGT ilvD 3810373 - 3808523 - | dihydroxy-acid dehydratase TERM 4817 3810406 - 3810427 + r 100 -12.3 -5.61913 | opp_overlap 3810406 TGTCTGTCTCGTAAA TGGGACGGT GCGT GCCGTCCCA TTTTTTGTATTTATT TERM 4818 3810427 - 3810406 - R 86 -11.6 -3.53012 | opp_overlap 3810406 TGTCTGTCTCGTAAA TGGGACGG TGCGTG CCGTCCCA TTTTTTGTATTTATT ilvE 3811367 - 3810438 - | branched-chain amino acid aminotransferase TERM 4819 3811380 - 3811397 + r 72 -5.5 -4.3767 | overlap 3811382 CATTTTTATATTCCT TTTGCGC TCAG GCGCGGA TTTGTTGTGATGTGG ilvM 3811647 - 3811387 - | acetolactate synthase 2 regulatory subunit ilvG 3813293 - 3811647 - | acetolactate synthase 2 catalytic subunit TERM 4820 3812490 - 3812479 - G 70 -5.8 -4.25283 | ACCCGGTCATCAAAA CGTG CACC CACG GCGATCAGCAGGTCA TERM 4821 3813382 - 3813409 + r 79 -11.2 -3.45366 | opp_overlap 3813384, overlap 3813384 3813407 TTTTAAGGTCAAAAA AACCCCCGGACC TTTC GGTGCGGGGGTC TTAGTTCGTTAAGGC TERM 4822 3813407 - 3813384 - R 100 -13.8 -5.47399 | opp_overlap 3813382 3813384 TTAAGGTCAAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TCTTAGTTCGTTAAG TERM 4823 3813384 - 3813407 + r 86 -13.8 -3.29727 | opp_overlap 3813384, overlap 3813382 TTAAGGTCAAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TCTTAGTTCGTTAAG ilvL 3813530 - 3813432 - | ilvG operon leader peptide TERM 4824 3813631 - 3813654 + r 76 -4 -5.00616 | opp_overlap 3813637 TTTTTATGATGGCTT TAATAATTTC AATA GAAATTGTTG TTTTTTAAAAAGAAA TERM 4825 3815367 - 3815379 + r 85 -6.2 -5.15167 | opp_overlap 3815367, overlap 3815361 ACTGACATAAAAAAA GGGC ATTTC GCCC TTTTTATTAATCGTC TERM 4826 3815379 - 3815367 - R 93 -6.9 -5.72616 | opp_overlap 3815361 3815367 ACTGACATAAAAAAA GGGCA TTT CGCCC TTTTTATTAATCGTC yifE 3815724 - 3815386 - | hypothetical protein TERM 4827 3816485 - 3816468 - g 72 -9.9 -3.31144 | TTCCCATTCTGACAA CCAGTTC TGCT GAACTGG CACAGCAACAGATTG yifA 3815843 - 3816682 + | transcriptional regulator HdfR TERM 4828 3816751 - 3816770 + F 73 -10.8 -3.00946 | opp_overlap 3816751, overlap 3816748 TTCAGATAAAAAAAA TCCTTAGC TTTC GCTAAGGA TGATTTCTGGCAGGG TERM 4829 3816770 - 3816751 - f 100 -10.8 -6.02914 | opp_overlap 3816751 3816748 TTCAGATAAAAAAAA TCCTTAGC TTTC GCTAAGGA TGATTTCTGGCAGGG TERM 4830 3817123 - 3817144 + F 74 -8.7 -3.91196 | GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4831 3819612 - 3819624 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4832 3820166 - 3820190 + F 71 -8 -3.93061 | gap 1, opp_overlap 3820172 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4833 3820392 - 3820405 + F 75 -6.7 -4.41177 | overlap 3820357 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC yieP 3822630 - 3823178 + | hypothetical protein yieO 3823225 - 3824628 + | putative transport protein rbsR 3825577 - 3824594 - | transcriptional repressor RbsR TERM 4834 3825566 - 3825550 - G 72 -7.9 -3.91897 | overlap 3825551 CTGTTGAGGTAGAAA CGCCCGC CAA ACGGGCA ACATCTTTCATTGTA rbsK 3826534 - 3825590 - | ribokinase TERM 4835 3826563 - 3826539 - R 90 -9.9 -4.38712 | opp_overlap 3826535 3826532, overlap 3826540 GGGATGTCCATAAAA TGCGCCACCGT GTT AGGGTGGCGCG TGCCCTGCTTTTCTT TERM 4836 3826562 - 3826540 - R 83 -13.4 -3.22906 | opp_overlap 3826535 3826532, overlap 3826539 GGATGTCCATAAAAT GCGCCACCGT GTT AGGGTGGCGC GTGCCCTGCTTTTCT rbsC 3828525 - 3827560 - | ribose ABC transporter permease protein S3936 3830210 - 3829707 - | IS1 orfB S3937 3830404 - 3830129 - | IS1 orfA TERM 4837 3830746 - 3830757 + r 71 -7.2 -4.07568 | GACATTTAACGCTGC GCCC GAGA GGGC TTTTACGCCCGGGAA rbsD 3831238 - 3830819 - | D-ribose pyranase TERM 4838 3830880 - 3830850 - G 75 -11.3 -3.00907 | gap 1, overlap 3830842 3830840 3830845 GCACAGAGAATGATA TTCGCATACGGAGA ACAT TCTCCGC-TGCGAA TTACCGCCTGACTTT TERM 4839 3831397 - 3831373 - R 100 -9.3 -5.50723 | CCATGAAAACAAAAA CGCCCCCTT ATGAAGA AAGGAGGCG TCTGGCGTTAGATTT trkD 3833273 - 3831405 - | potassium transport protein Kup TERM 4840 3833144 - 3833121 - G 76 -3.8 -4.88736 | overlap 3833129 3833130 GATCAGCGATAAAAA GCCAAACACG GCAT CGCGTTCAAC GCCAAAACCAAACTG TERM 4841 3833345 - 3833331 - R 79 -4.2 -5.24129 | overlap 3833332 TTGGCCCACAAAAAA GCGCAC AGT ATGCAC GATTAACGGCAAAAT TERM 4842 3833420 - 3833449 + r 89 -9.3 -4.59109 | opp_overlap 3833421, overlap 3833422 CCCCCCCTTTGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4843 3833448 - 3833421 - R 81 -12.8 -3.14132 | opp_overlap 3833420 3833422 CCCCCCTTTGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 4844 3833422 - 3833447 + r 100 -16.3 -3.90762 | opp_overlap 3833421, overlap 3833420 CCCCCTTTGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S3941 3834759 - 3833431 - | IS4 orf TERM 4845 3834767 - 3834792 + H 72 -9.1 -3.61398 | opp_overlap 3834767 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4846 3834792 - 3834767 - H 100 -9.8 -5.61596 | opp_overlap 3834767 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4847 3835157 - 3835176 + G 71 -2.9 -4.75404 | gap 1 ATATCTGATGACCCG CTTC-TCC ACGCC GGAAGAAG TTTTTGGTCCCCTTT yieN 3834909 - 3836429 + | regulatory ATPase RavA TERM 4848 3836789 - 3836801 + G 75 -4.8 -4.84017 | AGCACAATAACTTCA GCGT TACAC ACGC TTTTTCTCCAGCGTT yieM 3836423 - 3837874 + | hypothetical protein asnA 3838871 - 3837879 - | asparagine synthetase AsnA TERM 4849 3838562 - 3838617 + g 100 -17.1 -2.75074 | gap 2 ACGGAGAAAGACGGT CTTCATCG-GGGCGAAGGGCT-TTCAT GTGC GTGTACAGCCCTTCGCCCGCGCTGAAG TCGTGTTGCCCTAAG asnC 3839023 - 3839481 + | DNA-binding transcriptional regulator AsnC mioC 3839571 - 3840014 + | flavodoxin TERM 4850 3841259 - 3841242 - g 70 -6.3 -4.21607 | gap 1, overlap 3841246 TCGATCGAAGACAAA GTCATGCG CTT CGCA-GAC AGAAATCAGCATCAG gidA 3840393 - 3842282 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 4851 3842321 - 3842294 - f 100 -18.6 -4.77759 | overlap 3842284 3842283 ATAACGCATTAAAAA TGCCTGGTAAGC ACCC GCTTACCAGGCA ACGCATCAAGAACAG gidB 3842346 - 3842969 + | glucose-inhibited division protein B TERM 4852 3843057 - 3843094 + F 86 -5.2 -5.52384 | gap 3, overlap 3843052 CTGGTTACATTTAAC GCCACGTTCACTCTT-TTG CAT CAACAAGA-T-AACGTGGC TTTTTTTGGTAAGCA atpI 3843586 - 3843966 + | F0F1 ATP synthase subunit I TERM 4853 3844288 - 3844308 + G 74 -11.1 -3.17527 | overlap 3844286 3844299 TGATTGCTCCGCTGG CCCTGACGA TCT TCGTCTGGG TATTCCTGATGAATC atpB 3843975 - 3844790 + | F0F1 ATP synthase subunit A atpE 3844837 - 3845076 + | F0F1 ATP synthase subunit C TERM 4854 3845237 - 3845209 - g 73 -11.8 -2.77899 | gap 1, overlap 3845206 GTTCTGCATGAAGTA CGTATGGCCGCCA TTAA TGGCAGCCAT-CG AAAAACGTCAAAAAG TERM 4855 3845264 - 3845243 - g 70 -3.7 -4.67353 | GCAGCCATCGAAAAA CGTCAAAAA GAAA TTGCTGACG GCCTTGCTTCCGCAG atpF 3845138 - 3845608 + | F0F1 ATP synthase subunit B TERM 4856 3845797 - 3845753 - g 72 -5.1 -4.50686 | gap 3, opp_overlap 3845766 3845789, overlap 3845754 3845789 CCAAAAACGAACAAA TGGCAGAGCTTCTCTCTGGCGC GCTT GCGCCAGA-A-ACGCTC-GCCG AGTCGTTTATCGCAG atpH 3845623 - 3846156 + | F0F1 ATP synthase subunit delta TERM 4857 3846731 - 3846695 - g 78 -8.7 -4.26188 | overlap 3846696 GTCAGACAGGTAAAA CCGCACTGGCTATCGAT GCC ATCATCAACCAGCGCGA TTCCGGTATCAAATG TERM 4858 3846730 - 3846696 - g 70 -10 -3.15231 | overlap 3846695 TCAGACAGGTAAAAC CGCACTGGCTATCGAT GCC ATCATCAACCAGCGCG ATTCCGGTATCAAAT atpA 3846169 - 3847710 + | F0F1 ATP synthase subunit alpha TERM 4859 3847936 - 3847903 - g 100 -14.7 -3.91897 | opp_overlap 3847903 GTCCTTATGCAGAAA CCATGCGCAAAGTGA TTGG TCACCTTGCACACGG TAATCTGGAATATAA atpG 3847761 - 3848624 + | F0F1 ATP synthase subunit gamma TERM 4860 3848884 - 3848861 - g 76 -7.4 -4.18018 | GGTCTGGATGTAAAA GACCTCGAAC ACCC GATCGAAGTC CCGGTAGGTAAAGCG atpD 3848651 - 3850033 + | F0F1 ATP synthase subunit beta atpC 3850060 - 3850473 + | F0F1 ATP synthase subunit epsilon TERM 4861 3850522 - 3850491 - f 73 -10.2 -3.08032 | opp_overlap 3850496, overlap 3850496 CCGGCTTGAAAAGCA CAAAAGCCAGTCTG GAAA CAGGCTGGCTTTTT TTACGCGTTGACCCG TERM 4862 3850517 - 3850496 - f 93 -10.1 -4.67635 | opp_overlap 3850496, overlap 3850491 TTGAAAAGCACAAAA GCCAGTCTG GAAA CAGGCTGGC TTTTTTTACGCGTTG TERM 4863 3850496 - 3850517 + F 100 -12.3 -5.43866 | opp_overlap 3850496 3850491 TTGAAAAGCACAAAA GCCAGTCTG GAAA CAGGCTGGC TTTTTTTACGCGTTG TERM 4864 3851574 - 3851562 - g 84 -7.7 -4.62302 | GAACAGGCTGAAAAA CTGCT GTT AGCAG GCGTTATGCTGCGCG TERM 4865 3851586 - 3851599 + G 70 -5.2 -4.34402 | overlap 3851585 GCAGGCGTTATGCTG CGCG ATCCGG CGCG TTTTGATCTGCGCGG glmU 3850824 - 3852194 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 4866 3853187 - 3853153 - g 93 -6.4 -5.27923 | gap 1, opp_overlap 3853152 3853156, overlap 3853156 GAACGCGATAAAAAA CACCCTTACCG-GGC GCATCA GCCACGGTCAGGTTG ATTTAAGCGAGCTGG glmS 3852356 - 3854185 + | D-fructose-6-phosphate amidotransferase TERM 4867 3854298 - 3854273 - f 72 -9.1 -3.61398 | opp_overlap 3854273 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 4868 3854273 - 3854298 + F 100 -9.8 -5.61596 | opp_overlap 3854273 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT S3960 3854306 - 3855634 + | IS4 orf TERM 4869 3855645 - 3855616 - f 89 -9.3 -4.59109 | opp_overlap 3855617, overlap 3855618 3855639 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTGCCGACCGGTG TERM 4870 3855617 - 3855644 + F 81 -12.8 -3.14211 | opp_overlap 3855616 3855618 3855639 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTGCCGACCGGT TERM 4871 3855643 - 3855618 - f 100 -16.3 -3.90762 | opp_overlap 3855617, overlap 3855616 3855639 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTGCCGACCGG TERM 4872 3855887 - 3855865 - f 73 -4.3 -4.8622 | gap 1, opp_overlap 3855865 3855866, overlap 3855867 CCTTTGAATCAAAAA CA-CACTTAT TAAT ATAAGTGATG ATTCATGGTAAAGGA TERM 4873 3855884 - 3855867 - f 71 -7.1 -4.05402 | opp_overlap 3855866 3855865, overlap 3855865 TTTGAATCAAAAACA CACTTAT TAAT ATAAGTG ATGATTCATGGTAAA lpfA 3855926 - 3856498 + | putative major fimbrial subunit S3963 3858169 - 3857264 - | insertion element IS2 transposase InsD S3964 3858492 - 3858127 - | insertion sequence 2 OrfA protein TERM 4874 3859093 - 3859073 - H 72 -8.3 -3.65754 | opp_overlap 3859063 3859070 3859064 AGAAAGCATTGTAAA CTGGAATGC ATT GTATTCCAG TGATGATGTTTTACA S3965 3860121 - 3860627 + | putative secreted autotransporter toxin S3966 3861381 - 3860668 - | IS600 orfB S3967 3861824 - 3861522 - | IS600 orfA S3968 3862079 - 3862372 + | putative transport protein nepI 3863603 - 3862413 - | ribonucleoside transporter TERM 4875 3863182 - 3863147 - G 72 -6.8 -4.20368 | gap 1, overlap 3863132 3863159 3863162 CCAGCGCAATAGAAA CCGCGCCGAAGATCACC GAC AGCG-CCTTCGGCACCG TACGCGGCGGTACCA TERM 4876 3863405 - 3863389 - G 75 -5.1 -4.67607 | overlap 3863390 TGGGTAATAAACAAA CTGGCAA ACA TTGCCAC AAAGGCGGTCACGGT TERM 4877 3863570 - 3863580 + g 77 -8.2 -4.09864 | GTCGGGTGATGGCAT CCGC GCC GCGG TTTTCGGCAATAAAT yicN 3864293 - 3863814 - | hypothetical protein yicO 3865731 - 3864319 - | hypothetical protein TERM 4878 3865849 - 3865827 - H 72 -2.8 -5.09245 | TCAAAATGAGAAAAA TATGAATAAT TCC ATTAACCATA AATTTCATCACATTA yicP 3865828 - 3867594 + | cryptic adenine deaminase TERM 4879 3867621 - 3867603 - T 100 -13.1 -5.95946 | GGAATAATAAAAAAA GCCCGGC GTCAT GCCGGGC AAAAGTCACCAGTTA uhpT 3869031 - 3867640 - | sugar phosphate antiporter TERM 4880 3868464 - 3868450 - G 70 -6.4 -4.20368 | overlap 3868452 CGACGGGAAGATAAA CATGCC GAT GACATG GCCATCGAACAGGTA uhpC 3870488 - 3869169 - | regulatory protein UhpC TERM 4881 3869451 - 3869439 - G 73 -9.1 -3.65581 | ACCAATGGTGAAGAA GCAGG TTG CCTGC ATCACGTAGCTGGCA uhpB 3872000 - 3870498 - | sensory histidine kinase UhpB TERM 4882 3870936 - 3870922 - G 72 -7 -4.15788 | overlap 3870909 AACCGTCCTAACAAA CGGCGC ACC GCGTCG TAAACGCCCAGCGAC uhpA 3872590 - 3872000 - | DNA-binding transcriptional activator UhpA TERM 4883 3872642 - 3872618 - R 100 -12.2 -6.06723 | opp_overlap 3872617 3872615 3872618 GCGGGTAAAAAAAAA CGCGCTTACC TTAAC GATAAGCGCG ATGTTGTTCAAGCCT ilvN 3872955 - 3872665 - | acetolactate synthase 1 regulatory subunit TERM 4884 3872796 - 3872807 + g 74 -5.8 -4.45485 | CGTCATTGACCAGTA GCCA GATA TGGC TTTTGTCGCTGTCCT ilvB 3874647 - 3872959 - | acetolactate synthase catalytic subunit TERM 4885 3874701 - 3874725 + r 89 -11.4 -4.16279 | gap 1, opp_overlap 3874701, overlap 3874678 TGCTTAAACGAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 4886 3874725 - 3874701 - R 100 -10.7 -4.98531 | gap 1, opp_overlap 3874678 3874701 TGCTTAAACGAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG ivbL 3874851 - 3874753 - | ilvB operon leader peptide TERM 4887 3874788 - 3874824 + g 70 -5.8 -4.27584 | gap 1, overlap 3874797 CCACCACCACACGCA CGACGACC-ACTGCGGC GGAT GGCGCAGTTGGTAGTAG TTTTGCGTTGAACAT TERM 4888 3875002 - 3874987 - H 100 -8.2 -5.60689 | opp_overlap 3874987 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTCGTCAGCCGCCT TERM 4889 3875549 - 3875528 - H 100 -17.3 -3.74747 | opp_overlap 3875528 TCAAGTCGCACCAAA GGGGAGCGG GTAA CCGCTCCCC TTTTATATTTAGCGT TERM 4890 3875528 - 3875549 + H 100 -17.3 -4.79451 | opp_overlap 3875528 TCAAGTCGCACCAAA GGGGAGCGG GTAA CCGCTCCCC TTTTATATTTAGCGT TERM 4891 3875619 - 3875638 + H 74 -3.5 -4.93288 | overlap 3875620 GCCCTACCATCCCTC CCGGCAA CATTTA TTGCCGC TTTTGTTTACATATT TERM 4892 3876533 - 3876552 + G 80 -5.6 -5.02074 | overlap 3876535 TCAGTATTTTGTTTA TTCTGCCG ATTC CGGCGGCA TTTTTTGGGGCATGG TERM 4893 3876921 - 3876964 + G 74 -10.3 -3.53444 | gap 2 GTTGATCGTGCTGTG CTGGCTGCCGCTG--GCGACG CGGA TGTCGCATCAGGGGCAGCCCG TTTAAGCGCACGTCA emrD 3875818 - 3876969 + | multidrug resistance protein D yidF 3877474 - 3876977 - | putative transcriptional regulator TERM 4894 3877104 - 3877070 - G 90 -7.7 -4.92757 | opp_overlap 3877070, overlap 3877090 GGAGTAAGAATAAAA CGCCTGATAGCCCGC ACAAA GCACGCTGTCTGGCG TCTCCTGCCGAGCGT TERM 4895 3877433 - 3877392 - G 75 -4.4 -4.86033 | opp_overlap 3877395 3877398, overlap 3877394 AAATTGTGATAAAAA TCGGCAGGTTGCAGAGCA TCCTTG TACTCTACAACCAGCTTA TGCCTGTCCTCTTCA yidG 3877833 - 3877471 - | hypothetical protein yidH 3878170 - 3877823 - | hypothetical protein TERM 4896 3878545 - 3878560 + G 70 -6.1 -4.17556 | CGCACTGGCCATTGC TGCGC TACTTT GCGCA TTTATTGGCGGTATG yidI 3878279 - 3878692 + | hypothetical protein TERM 4897 3878673 - 3878687 + T 72 -9.2 -3.53811 | TTTTTTCCTTCCTGA CCGGCG GTT CGCTGG TTTAAGCAGCCTGAA TERM 4898 3878740 - 3878750 + T 85 -5.4 -5.31275 | AGCGGGCATTATCGT CAGA ATT TCTG TTTTTTCTCCTCCAC yidK 3881931 - 3880216 - | putative symporter YidK TERM 4899 3882984 - 3882952 - g 90 -11.3 -3.90922 | overlap 3882954 3882955 AGCCGTGCTAAAGAA TACGGACCAGCACCC AAC GGATGCCAGTCCACA CAATTAACGTAACTC TERM 4900 3882982 - 3882954 - g 82 -11.7 -3.54488 | overlap 3882952 3882955 CCGTGCTAAAGAATA CGGACCAGCACCC AAC GGATGCCAGTCCA CACAATTAACGTAAC TERM 4901 3882981 - 3882955 - g 81 -13 -2.72371 | overlap 3882954 3882952 CGTGCTAAAGAATAC GGACCAGCACCC AAC GGATGCCAGTCC ACACAATTAACGTAA yidL 3882098 - 3882991 + | putative ARAC-type regulatory protein glvB 3884287 - 3883802 - | arbutin specific enzyme IIB component of PTS TERM 4902 3884111 - 3884122 + g 70 -5.8 -4.22041 | TGCAGCGGTGGTTTG GCCT CGCG AGGC TTTGTATTCGGCTTT TERM 4903 3884558 - 3884548 - H 77 -6.8 -4.43208 | ACATCGCTAAAGAAA TGCC CAC GGCA CCAAAGATTTTTGAG TERM 4904 3885627 - 3885641 + H 82 -2.9 -5.47821 | opp_overlap 3885627, overlap 3885629 ACAGCATCGAACACA TCTTT AAAAA AAAGA TTTTTTTCAATCGAT yidP 3885713 - 3886387 + | putative transcriptional regulator yidE 3888087 - 3886426 - | hypothetical protein TERM 4905 3888267 - 3888247 - R 100 -14.7 -5.90231 | AGAAAGACAAAAAAA GCCCCACCA GAA TGGCGGGGC AAAGAGAATAGCTAG ibpB 3888711 - 3888283 - | heat shock chaperone IbpB TERM 4906 3888436 - 3888465 + g 88 -2.1 -5.57729 | opp_overlap 3888426 3888436 3888437, overlap 3888426 AAAACTCAGGCTAAA TGGCTGATTCA TAAGCCCT TGATGCAGCCA TTTTTTCTCTTCTTT ibpA 3889236 - 3888823 - | heat shock protein IbpA yidQ 3889541 - 3889873 + | hypothetical protein yidR 3891149 - 3889875 - | hypothetical protein TERM 4907 3890281 - 3890314 + g 81 -9.5 -4.0098 | gap 1, opp_overlap 3890278 GTAAAGGTTAAACGT CGCTGCACGACGCCAC GCG GTGGCG-CGGGTAGGG TTGTTTCCGTTCCAC TERM 4908 3891329 - 3891315 - g 73 -4.2 -4.82901 | overlap 3891318 3891319 CGCGCTGGATAAAAA GCACCA GTG CGGTAC TGAAGGTTTCAGCAA TERM 4909 3892220 - 3892199 - g 95 -9.4 -4.87807 | opp_overlap 3892199 GCAAGATAGTAAAAA GCCGATGC CTGACC GCACCGGC TTTAAGAAAGTGGAT TERM 4910 3892264 - 3892230 - g 85 -10.1 -4.15222 | opp_overlap 3892238 ACCGGCTTTAAGAAA GTGGATTATGCGC AGTGGTGTG GCGCATATTCCAC AGTTGAAAGATTATC yidS 3891214 - 3892314 + | putative oxidoreductase dgoT 3893612 - 3892275 - | D-galactonate transport protein dgoK 3896311 - 3895433 - | 2-oxo-3-deoxygalactonate kinase yidW 3896997 - 3896308 - | regulator protein for dgo operon TERM 4911 3897979 - 3897929 - R 100 -16.4 -3.57418 | gap 1, opp_overlap 3897932, overlap 3897932 TATGCAGTAAACCAA TAATCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGCCCACAGATTA ATTCAGCACATACTT TERM 4912 3897932 - 3897976 + r 73 -10 -3.34013 | gap 1, opp_overlap 3897929 3897932 GCAGTAAACCAATAA TCAGTAAGCGGGCAAAC-GCG TTTA TGCTGTTTGCCCGCCCACAGA TTAATTCAGCACATA TERM 4913 3897976 - 3897932 - R 100 -13.7 -3.91541 | gap 1, opp_overlap 3897932, overlap 3897929 GCAGTAAACCAATAA TCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGCCCACAGA TTAATTCAGCACATA yidA 3898789 - 3897977 - | sugar phosphatase TERM 4914 3898697 - 3898709 + g 72 -5.5 -4.56775 | GCCACGGGCGCGAGC TGCGG CAA TCGCA TTTTTAACGGCGGGT yidB 3899301 - 3898903 - | hypothetical protein TERM 4915 3899379 - 3899409 + r 100 -17 -3.47751 | opp_overlap 3899384, overlap 3899384 GCGGATTGCAGAAAT AAAAAGGGCGGAGA TGA TCTCCGCCCTTTTC TTATAGCTTCTTGCC TERM 4916 3899404 - 3899384 - R 100 -16.9 -5.38054 | opp_overlap 3899379 3899384 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTTCTTATAGCTTC TERM 4917 3899384 - 3899404 + r 100 -16.9 -4.80959 | opp_overlap 3899384, overlap 3899379 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTTCTTATAGCTTC gyrB 3901955 - 3899541 - | DNA gyrase subunit B TERM 4918 3899614 - 3899586 - G 72 -7.3 -4.15044 | overlap 3899587 3899590 GTTCTCTTCAATAAA CGCACGACGCGGT TCT ACGGCGTCGCCCA TCAGCGTGGTGAACA TERM 4919 3899610 - 3899590 - G 70 -11.1 -2.75825 | overlap 3899587 3899586 TCTTCAATAAACGCA CGACGCGGT TCT ACGGCGTCG CCCATCAGCGTGGTG TERM 4920 3900723 - 3900737 + g 74 -10 -3.53012 | CGCCGGATCGCGTTC CTGGCA GTC TGCCAG TTTGCCCGGCAGGCC recF 3903057 - 3901984 - | recombination protein F TERM 4921 3902499 - 3902539 + g 70 -10.3 -3.1372 | overlap 3902497 GCCAGGTGCTGATTT GCTCCGCCAGCGGGATCAG TTC TTTATCCCACGGGCGTAGC TGTTCGTAACGAGTC TERM 4922 3902924 - 3902905 - G 73 -9.2 -3.63968 | overlap 3902898 CTGCAAACTGCGAAA CGCCCGAC CATG GCCGAGCG TATAGATGGCTTCCA dnaN 3904157 - 3903057 - | DNA polymerase III subunit beta dnaA 3905565 - 3904162 - | chromosomal replication initiation protein TERM 4923 3905236 - 3905255 + g 74 -10 -3.54129 | gap 1, opp_overlap 3905235 3905234, overlap 3905254 TGAGCGCGTAGAAGG CGCAGCACG TTG CG-GCTGCG TTTGCGCCACCTGTG rpmH 3906172 - 3906312 + | 50S ribosomal protein L34 TERM 4924 3906513 - 3906493 - g 74 -2.6 -5.06816 | gap 1 AGTCGCCAAGAAAAA CGTTCGACG CGCC CAT-GAACG CAATCGGATTAAACG rnpA 3906329 - 3906688 + | ribonuclease P yidC 3906912 - 3908558 + | putative inner membrane protein translocase component YidC TERM 4925 3908602 - 3908583 - f 79 -9.2 -4.17048 | opp_overlap 3908584, overlap 3908584 TTTTCGCTAAAATAA GGGCGGTC AGTT GACCGCCT TTTTTCTTTTCGTAG TERM 4926 3908584 - 3908601 + F 100 -12.7 -5.83211 | opp_overlap 3908583 3908584 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 4927 3908601 - 3908584 - f 80 -12.7 -3.09908 | opp_overlap 3908584, overlap 3908583 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 4928 3909686 - 3909672 - g 76 -7.8 -4.20516 | overlap 3909682 GTGGTACGCAATAAA GCCGAT ATC ACCGGC GAAACGCTGGGAATG trmE 3908664 - 3910028 + | tRNA modification GTPase TrmE TERM 4929 3910037 - 3910072 + T 86 -12 -3.53712 | gap 1, opp_overlap 3910030 3910042, overlap 3910030 3910036 3910038 3910060 TAAGTAACCGCGCTT ACGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCGC TTCATTGTTAGCACT TERM 4930 3910038 - 3910071 + T 90 -15.5 -2.71745 | gap 1, opp_overlap 3910030 3910042, overlap 3910030 3910036 3910037 3910060 AAGTAACCGCGCTTA CGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCG CTTCATTGTTAGCAC S4014 3910745 - 3910242 - | IS1 orfB S4015 3910939 - 3910664 - | IS1 orfA tnaL 3911046 - 3911120 + | tryptophanase leader peptide TERM 4931 3911990 - 3911974 - g 78 -8 -4.35524 | CTGGCAAACTTAAAA GCGATG TACAG CATCGC GAAGAAATACGATAT tnaA 3911341 - 3912756 + | tryptophanase TERM 4932 3912950 - 3912960 + G 75 -4.6 -4.85599 | TACCTGTTGATCTTG CCGG TGC CTGG TTTTTCTGGGGTGCC tnaB 3912847 - 3914094 + | tryptophan permease TnaB TERM 4933 3914104 - 3914126 + F 83 -13.5 -3.12351 | opp_overlap 3914107, overlap 3914107 GGCTAAATCCTTCAA GAAGCCAGC CATTC GCTGGCTTC TTGCCTCTCAGGAAA TERM 4934 3914107 - 3914123 + F 76 -9.4 -3.70773 | opp_overlap 3914107, overlap 3914104 TAAATCCTTCAAGAA GCCAGC CATTC GCTGGC TTCTTGCCTCTCAGG TERM 4935 3914123 - 3914107 - f 72 -9.4 -3.64283 | opp_overlap 3914107 3914104 TAAATCCTTCAAGAA GCCAGC CATTC GCTGGC TTCTTGCCTCTCAGG TERM 4936 3914802 - 3914830 + G 74 -2.3 -5.14563 | opp_overlap 3914810, overlap 3914810 GCTTCGGACAAACCA CGAGAAAATAGCG AGT CGCTGCTTAATCG TTTTTTCCTCAGCCG TERM 4937 3914969 - 3915002 + G 73 -9 -3.60475 | gap 1, overlap 3914991 TATGGCGCTGACCGC TGGCGTC-AGCATGA CCTTT TCATTCTCGACGCCA TTTGCGCTGGGAATT yidY 3914226 - 3915401 + | multidrug efflux system protein MdtL S4021 3916781 - 3916068 - | IS600 orfB S4022 3917224 - 3916922 - | IS600 orfA yieE 3917759 - 3918508 + | hypothetical protein TERM 4938 3918922 - 3918932 + G 72 -6.8 -4.2828 | TCAGTATCACCTGCG CCAG ATT CTGG TTTTCCTCGATGCAA yieF 3918530 - 3919096 + | hypothetical protein TERM 4939 3919105 - 3919129 + T 88 -8.6 -4.74132 | gap 1, opp_overlap 3919105, overlap 3919123 GATCTAAATAAAAAA CCCGCCA-GTA ATCA TGCATGGCGGG TTTTTAATGCGCTAT TERM 4940 3919129 - 3919105 - T 93 -6.4 -5.65927 | gap 1, opp_overlap 3919105 3919123 GATCTAAATAAAAAA CCCGCCA-GTA ATCA TGCATGGCGGG TTTTTAATGCGCTAT yieG 3920487 - 3919150 - | putative membrane / transport protein yieH 3920652 - 3921308 + | 6-phosphogluconate phosphatase TERM 4941 3921477 - 3921489 + G 78 -7.7 -4.32034 | opp_overlap 3921477 ATATTCTTCGCAAAA GAACC GCT GGTTC TTTTGGTAATAATAC TERM 4942 3921489 - 3921477 - g 74 -7.7 -4.08394 | opp_overlap 3921477 ATATTCTTCGCAAAA GAACC GCT GGTTC TTTTGGTAATAATAC yieI 3921375 - 3921848 + | putative inner membrane protein TERM 4943 3922012 - 3921985 - f 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 4944 3922352 - 3922364 + G 73 -9.1 -3.62046 | opp_overlap 3922345 GCTAAGCAGGCATTA CAGCC TGG GGCTG TTGTTGCCCGGATCG S4029 3922016 - 3922690 + | ISSfl3 orfA S4030 3922687 - 3923037 + | ISSfl3 orfB TERM 4945 3923265 - 3923228 - g 70 -6.2 -4.1585 | overlap 3923229 3923233 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 4946 3923287 - 3923270 - g 82 -9.1 -4.19238 | overlap 3923283 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA S4031 3923034 - 3924635 + | ISSfl3 orfC TERM 4947 3925247 - 3925274 + T 72 -6.3 -4.2204 | gap 1, opp_overlap 3925247 3925245 TAAATAATGAGAACA GGCCGGAGCGTA ATTCA TACA-TCCGGCC TTATTTCTTCAGCTT yieK 3926010 - 3925288 - | putative 6-phosphogluconolactonase yieL 3927187 - 3926012 - | putative xylanase TERM 4948 3927165 - 3927142 - G 86 -11 -3.97947 | opp_overlap 3927135, overlap 3927145 CCCACTGAGCAGAAA TACCGCTGGC AATA GCCAGCGTTA AAGCAGCAATTTTTA TERM 4949 3927162 - 3927145 - G 77 -12.7 -2.7439 | opp_overlap 3927135, overlap 3927142 ACTGAGCAGAAATAC CGCTGGC AATA GCCAGCG TTAAAGCAGCAATTT yieC 3928791 - 3927214 - | putative receptor protein TERM 4950 3928100 - 3928112 + g 72 -7.7 -3.92659 | overlap 3928094 CGCTGCGTTTTCCAG TCCAG CAT CTGGA TTTCAATTTTCGGCG TERM 4951 3928518 - 3928534 + g 74 -2.1 -5.16206 | opp_overlap 3928519, overlap 3928519 TGGAAGAATAAATCG AGCCTGT CTC ACTGGCA TTTTTCTCTTCATTT TERM 4952 3928698 - 3928713 + g 79 -4.7 -4.9218 | TTTTGAGTTCGCTTT GCGTT TCTCTT AACGC TTTTTCTAATAACTC TERM 4953 3928892 - 3928867 - R 78 -12.7 -2.64572 | opp_overlap 3928864, overlap 3928863 3928859 3928856 GAAAGAATTAACGTA TCGCATCCAGA CTGT TCTGAATGCGA CGATAATTAAGGTGC S4036 3929809 - 3929306 - | IS1 orfB S4037 3930003 - 3929728 - | IS1 orfA bglB 3931086 - 3930037 - | phospho-beta-glucosidase B cryptic bglF 3932982 - 3931105 - | beta-glucoside-specific PTS system components IIABC bglG 3933937 - 3933116 - | transcriptional antiterminator BglG TERM 4954 3934000 - 3933969 - R 100 -5.1 -6.5058 | opp_overlap 3933969 3933978 ATAAACAAAAAAAAA CCGACTTCACCAG TATTCT CTGGTTATGTCAG GTTTTGCCTGCGAAT TERM 4955 3934214 - 3934184 - R 95 -14.3 -3.63054 | opp_overlap 3934184 3934188, overlap 3934188 TAAAGTTATATATAA CAAATCCCAATAA TTAAG TTATTGGGATTTG TCTGGTGAATTATTT TERM 4956 3934184 - 3934214 + r 93 -15 -2.85021 | opp_overlap 3934184 3934188, overlap 3934188 TAAAGTTATATATAA CAAATCCCAATAAT TAA GTTATTGGGATTTG TCTGGTGAATTATTT TERM 4957 3934210 - 3934188 - R 86 -9.3 -4.42974 | opp_overlap 3934188 3934184, overlap 3934184 GTTATATATAACAAA TCCCAATAA TTAAG TTATTGGGA TTTGTCTGGTGAATT TERM 4958 3934188 - 3934210 + r 83 -10 -4.09822 | opp_overlap 3934184 3934188, overlap 3934184 GTTATATATAACAAA TCCCAATAAT TAA GTTATTGGGA TTTGTCTGGTGAATT phoU 3934949 - 3934224 - | transcriptional regulator PhoU pstB 3935737 - 3934964 - | phosphate transporter subunit pstA 3936719 - 3935829 - | phosphate transporter permease subunit pstC 3937678 - 3936767 - | phosphate transporter permease subunit pstS 3938805 - 3937765 - | phosphate transporter subunit S4046 3940059 - 3940334 + | IS1 orfA lpfC 3943435 - 3940913 - | putative long polar fimbriae TERM 4959 3941715 - 3941693 - G 78 -10.6 -3.49232 | overlap 3941691 TTGCGAAACAGAATA GGTGGCGTAA CTA TTACCCCACC AGCCCGATAAAGGAA TERM 4960 3942215 - 3942199 - G 70 -4.3 -4.48299 | overlap 3942201 TCACATCGAAAGAAA TTGCGCC CAA AGCGCCA AGATCTTTACCGACA TERM 4961 3942667 - 3942657 - G 77 -8.2 -4.10164 | opp_overlap 3942656 3942664, overlap 3942658 TTATCAGTATACAAA CGCG CGC CGCG AATTTGCGTACTGTC S4049 3943581 - 3943946 + | insertion sequence 2 OrfA protein S4050 3943904 - 3944809 + | insertion element IS2 transposase InsD TERM 4962 3946435 - 3946388 - T 82 -12.9 -2.8547 | opp_overlap 3946399 3946402, overlap 3946399 3946402 AGGCTGTATATTATA CTGGCTGTAAACAACATGGCC ACCAAG GACCATGTTGTTTACAGCATA CCCTTGTTGCAAAAG TERM 4963 3946424 - 3946399 - T 75 -9.8 -3.54129 | opp_overlap 3946399 3946402, overlap 3946388 3946402 TATACTGGCTGTAAA CAACATGGCC ACCAAG GACCATGTTG TTTACAGCATACCCT iutA 3948654 - 3946459 - | putative ferric siderophore receptor iucD 3949997 - 3948660 - | lysine:N6-hydroxylase TERM 4964 3949896 - 3949882 - G 71 -2.8 -4.7373 | GGATGCCAGGAAAAA TGAGGA TGT TCGTCA AAGAAGAGACAGTTC iucC 3951736 - 3949994 - | siderophore biosynthesis protein TERM 4965 3950159 - 3950149 - G 70 -4.6 -4.4727 | overlap 3950151 TGAAGAGTGAGAAAA GCGC AAA ACGC TCTGCCATTTGTGGA TERM 4966 3951780 - 3951760 - R 86 -11.9 -3.61715 | GACCTCCGTGAAGAA GTGATGACG ATC CGCCATCAC CATGCGCGAGCGCTT iucB 3952683 - 3951736 - | siderophore biosynthesis protein iucA 3954465 - 3952684 - | siderophore biosynthesis protein TERM 4967 3953883 - 3953872 - G 70 -5.8 -4.19817 | overlap 3953873 TTTATCCACCGAAAA CCAC CGCA GTGG GAAGTGGGGTGCCAT TERM 4968 3954275 - 3954296 + g 81 -13.1 -2.5547 | overlap 3954274 3954282 AAATGGAGCGATTTC TGCTCATCC AGCG GGATGAGCA ATTCGTCTGGCGGGT TERM 4969 3954368 - 3954387 + g 82 -7.8 -4.56597 | overlap 3954369 TTCAGGAAGCACTGC GCAGCCAC ATCT GTGGCTGG TTTTTCAGAGGGCAG TERM 4970 3954369 - 3954386 + g 80 -11.3 -3.33744 | overlap 3954368 TCAGGAAGCACTGCG CAGCCAC ATCT GTGGCTG GTTTTTCAGAGGGCA TERM 4971 3954486 - 3954435 - G 70 -5.6 -4.39166 | gap 1, opp_overlap 3954438 3954465, overlap 3954438 3954447 3954472 TCCCACACAGTAAAA TAATAACAATTAT-GTCAATAATGA TTC TCATTATCAACAATAAATGTTATTG TCAGATAAATTAATT TERM 4972 3954483 - 3954438 - G 75 -7.3 -4.30909 | gap 1, opp_overlap 3954438 3954465, overlap 3954435 3954447 3954472 CACACAGTAAAATAA TAACAATTAT-GTCAATAATGA TTC TCATTATCAACAATAAATGTTA TTGTCAGATAAATTA shiE 3956658 - 3955687 - | hypothetical protein imm 3954544 - 3955737 + | putative membrane transport protein TERM 4973 3956262 - 3956286 + gF 75 -5.2 -4.64992 | gap 1, opp_overlap 3956268 TGATGACGAGTTGAG GATG-AAGAAA TAAG TTTCTTTCATC TTTATGTTTTTTGGG S4058 3956539 - 3956814 + | IS1 orfA S4059 3956733 - 3957236 + | IS1 orfB TERM 4974 3957460 - 3957483 + T 100 -7.4 -5.97575 | overlap 3957459 ATGGGGTATTCCCTC CGCCGGCA CTATGTGT TGCTGGCG TTTTTTTTATCAATT shiD 3958155 - 3957757 - | colV-immunity protein S4060 3959474 - 3959839 + | insertion sequence 2 OrfA protein S4061 3959797 - 3960702 + | insertion element IS2 transposase InsD TERM 4975 3961497 - 3961524 + F 86 -12.1 -3.61398 | TTGAGAGTTCATCGT TCGCGTCCATT AATACA GATGGACGCGA TTGTTGCCAGACAGG S4062 3961705 - 3962031 + | IS629 orfA TERM 4976 3962347 - 3962335 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC S4063 3962267 - 3962914 + | IS629 orfB shiC 3963513 - 3962995 - | hypothetical protein S4064 3963698 - 3963997 + | IS3 orfA S4832 3963994 - 3964386 + | IS3 orfB shiB 3965306 - 3964845 - | hypothetical protein TERM 4977 3965363 - 3965379 + r 70 -9.5 -3.03159 | opp_overlap 3965355 3965359 3965358 TATAAAACCACCGTA TGGACAA CTA TTGTCCA TATTAAAAAAGTTGG TERM 4978 3965754 - 3965734 - R 87 -9.7 -4.31397 | ACTTTCAGAAAATAA CCCCAGG GTAATCA CCTGGGG AAGGAACACAGTGTT shiA 3966864 - 3965821 - | hypothetical protein TERM 4979 3967230 - 3967206 - R 100 -12.9 -5.35721 | ATATAATAACAAAAA TCCTCCAGCCT TGT AGGCCAGAGGA TAAAATACTTAATTG S4835 3968487 - 3967276 - | putative integrase TERM 4980 3967496 - 3967516 + g 80 -11.3 -3.35298 | opp_overlap 3967500, overlap 3967500 AGTCTTCCCTTATAT CCAAGTAAT TCA ATTACTTGG TTAATGCTTTCCTTA TERM 4981 3968182 - 3968192 + g 100 -3.2 -5.61689 | ATTTTTCAGACTCAT TTGC TGC GCGA TTTTTTCTTCCTTTT TERM 4982 3970345 - 3970332 - H 76 -5.2 -4.83615 | GATGCGGCAGAAAAA GCGC AGAACA GCGC CACGATTAGCATCAT yicI 3970539 - 3972857 + | alpha-xylosidase YicI TERM 4983 3972899 - 3972871 - T 88 -14.5 -3.08312 | opp_overlap 3972869 3972868 AATCTATTGACGGAA TGCCGGGTACGTC TGA GTCGTACCCGGCG AGATTGATGTTTACC yicH 3974619 - 3972910 - | hypothetical protein TERM 4984 3974706 - 3974735 + r 81 -13 -2.63644 | gap 1, overlap 3974703 3974702 3974733 GTGAAAGAGGTGAGA CT-GCGGCGGTAA TTATC TTACCGCCGCCAG TGAATTACTGTTTTT TERM 4985 3974733 - 3974745 + r 73 -4.1 -4.91109 | opp_overlap 3974743, overlap 3974706 3974703 3974702 TTATCTTACCGCCGC CAGTG AAT TACTG TTTTTCTGGTGGGAA yicE 3976131 - 3974740 - | putative transport protein TERM 4986 3974863 - 3974850 - G 72 -6.7 -4.24002 | overlap 3974853 GGGCAAACTGCAAAA TCAGC GGCT GCTGA GACACGCCCAGACCA TERM 4987 3975198 - 3975210 + g 76 -9.1 -3.83026 | overlap 3975180 CGTTTGCCAGCACGC CGCCT TTC AGGCG TTTCATGTACAGCGG TERM 4988 3976197 - 3976186 - H 73 -4.4 -4.80455 | GACCGAAAGAGAAAA GCAA ACGT TTGC CACATCCTCATCTAA TERM 4989 3976747 - 3976737 - g 72 -6.8 -4.18018 | opp_overlap 3976737 GTTGGTGATGCAAAA TGCC ATT GGCA TTGGTATGGCTAGCC gltS 3976411 - 3977616 + | glutamate transport protein TERM 4990 3977624 - 3977647 + T 83 -9.5 -4.14392 | opp_overlap 3977625, overlap 3977617 3977625 CCGGTTAACCGATGA AGCGGCGGT CTTCTC ACCGCCGCC TTTTACGCATTCGAG TERM 4991 3977625 - 3977646 + T 82 -13 -3.08314 | opp_overlap 3977625, overlap 3977617 3977624 CGGTTAACCGATGAA GCGGCGGT CTTCTC ACCGCCGC CTTTTACGCATTCGA TERM 4992 3977646 - 3977625 - T 83 -13 -3.21912 | opp_overlap 3977617 3977625 3977624 CGGTTAACCGATGAA GCGGCGGT CTTCTC ACCGCCGC CTTTTACGCATTCGA recG 3979731 - 3977650 - | ATP-dependent DNA helicase RecG TERM 4993 3977914 - 3977933 + g 90 -10 -4.36914 | overlap 3977904 TTGCAGGCGAATTTG CGCCGTTT TAGA AAGCGGCG TTTTGTAGAGCAGCA spoU 3980426 - 3979737 - | tRNA guanosine-2'-O-methyltransferase spoT 3982541 - 3980433 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 4994 3981985 - 3982003 + g 70 -5.2 -4.371 | opp_overlap 3981985, overlap 3981979 TACAGCGCCTCAAAA CCCAGCTC TTC GAGTTCGG TTTTAATGTGGTGGA rpoZ 3982835 - 3982560 - | DNA-directed RNA polymerase subunit omega gmk 3983513 - 3982890 - | guanylate kinase TERM 4995 3983458 - 3983446 - G 82 -9.1 -4.15044 | opp_overlap 3983442 3983446 TGGGTTTTTAATAAA GCCTG AAT CAGGC TGGATTTACCCGCGC TERM 4996 3984392 - 3984428 + G 79 -4.4 -4.9725 | gap 2, overlap 3984393 GCTGGCCTGATGATG C-GCCAG-GGGAATAGCG ACA CGCTAAACTCACTGGCTG TTTTTGTCTGGGCAT TERM 4997 3984393 - 3984426 + G 74 -8.1 -4.11141 | gap 1, overlap 3984392 CTGGCCTGATGATGC GCCAG-GGGAATAGCG ACA CGCTAAACTCACTGGC TGTTTTTGTCTGGGC TERM 4998 3985430 - 3985405 - g 90 -11.9 -3.89354 | TGCGCAAATCAAGAA GCTGGGCAG TTGGCTGG CTGCCCAGC AGATCACAGGTTTTG ligB 3983771 - 3985453 + | NAD-dependent DNA ligase LigB yicG 3986121 - 3985450 - | hypothetical protein dinD 3987182 - 3986358 - | DNA-damage-inducible protein D TERM 4999 3986978 - 3987009 + g 100 -16 -2.63079 | opp_overlap 3986975 3987004, overlap 3986975 3986975 3987004 CATTTGAGCCAATTT TGACCATATCGAGG ATCT CCTCGAAATGGTCA TCAATTGTGTGACCA TERM 5000 3987365 - 3987341 - R 76 -4.2 -5.06414 | opp_overlap 3987341 TGCGGGGAAGAAAAA TGCCGCTC TGTTTGAGT GGGCGGCA TTTGTGAAGGCTGAA yicC 3988266 - 3987403 - | hypothetical protein rph 3988393 - 3989109 + | ribonuclease PH TERM 5001 3989117 - 3989134 + F 100 -11.3 -6.06529 | CAAACTGATTTTTAA GGCGACT GATG AGTCGCC TTTTTTTTGTCTGTA pyrE 3989175 - 3989816 + | orotate phosphoribosyltransferase TERM 5002 3989849 - 3989822 - T 90 -9.8 -4.41348 | opp_overlap 3989821 3989819 3989824, overlap 3989823 3989824 TGGCGTTTAAAGAAA CTCGCCGGATGA AAAG TCATCCGGCGTC ATATTACTGCAACTG TERM 5003 3989848 - 3989823 - T 83 -13.3 -3.24488 | opp_overlap 3989821 3989819 3989824, overlap 3989822 3989824 GGCGTTTAAAGAAAC TCGCCGGATGA AAAG TCATCCGGCGT CATATTACTGCAACT TERM 5004 3989824 - 3989847 + T 100 -16.8 -2.77523 | opp_overlap 3989823 3989822 3989824, overlap 3989821 3989819 GCGTTTAAAGAAACT CGCCGGATGA AAAG TCATCCGGCG TCATATTACTGCAAC TERM 5005 3989847 - 3989824 - T 95 -16.8 -2.54371 | opp_overlap 3989824 3989821 3989819, overlap 3989823 3989822 GCGTTTAAAGAAACT CGCCGGATGA AAAG TCATCCGGCG TCATATTACTGCAAC slmA 3990449 - 3989853 - | nucleoid occlusion protein TERM 5006 3990503 - 3990523 + r 76 -11.9 -2.50817 | overlap 3990502 3990500 3990498 GCACCCACGCTATGA CCGCAAACG AAA TGTTTGCGG CTATGTTATGACGTT dut 3991014 - 3990556 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 5007 3990682 - 3990654 - G 77 -3 -5.08601 | opp_overlap 3990658, overlap 3990655 3990658 CTACCGGAACAAAAA TCATCTGGGCGA TGCGT TCGCCAGGTTGA ATGGTGAAGCTGTCC dfp 3992212 - 3990992 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase radC 3992378 - 3993052 + | DNA repair protein RadC TERM 5008 3993065 - 3993078 + F 72 -6.7 -4.2074 | overlap 3993062 TAACCCGCTATGCGC GATCC TTCG GGATC TTTGTCTGTTCGGGA rpmB 3993269 - 3993505 + | 50S ribosomal protein L28 TERM 5009 3993649 - 3993625 - g 70 -3.6 -4.62872 | gap 1, opp_overlap 3993625 ACTAAGCCGGAAAAA CTGGAACTGAA AAAA TTC-GATCCAG TTGTTCGTCAGCACG rpmG 3993526 - 3993693 + | 50S ribosomal protein L33 TERM 5010 3993708 - 3993743 + F 100 -16.4 -2.90194 | opp_overlap 3993711 3993718, overlap 3993711 3993718 ATTCTCGCTTTGATG TAACGAAAAACCTCGC TCCG GCGGGGTTTTTTGTTA TCTGCTTGCCCCCAT TERM 5011 3993711 - 3993740 + F 93 -13.7 -3.59946 | opp_overlap 3993711 3993718, overlap 3993708 3993718 CTCGCTTTGATGTAA CGAAAAACCTCGC TCCG GCGGGGTTTTTTG TTATCTGCTTGCCCC TERM 5012 3993718 - 3993733 + F 100 -8.2 -5.60689 | opp_overlap 3993718 3993711, overlap 3993711 3993708 TGATGTAACGAAAAA CCTCGC TCCG GCGGGG TTTTTTGTTATCTGC TERM 5013 3993733 - 3993718 - f 78 -6 -4.88407 | opp_overlap 3993711 3993708 3993718, overlap 3993711 TGATGTAACGAAAAA CCTCGC TCCG GCGGGG TTTTTTGTTATCTGC mutM 3993791 - 3994600 + | formamidopyrimidine-DNA glycosylase coaD 3995118 - 3994639 - | phosphopantetheine adenylyltransferase kdtA 3996403 - 3995126 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 5014 3995256 - 3995266 + g 70 -6.8 -4.08945 | opp_overlap 3995256 GCGTCGGTGAGTAAA GAGG AAA CCTC TTTTGCAAGCGTAGT TERM 5015 3995782 - 3995807 + g 75 -5.3 -4.61482 | overlap 3995783 CAGAAATATCGAATT TCAGGCTACCG GTAA CGGTTACCTGG TTATTTTTTGCGCCC S4097 3996537 - 3996812 + | IS1 orfA S4098 3996731 - 3997234 + | IS1 orfB waaQ 3997592 - 3998650 + | lipopolysaccharide core biosynthesis protein waaG 3998647 - 3999771 + | LPS alpha1,3-glucosyltransferase TERM 5016 4000372 - 4000392 + G 77 -3.3 -5.10461 | AGGTCGTTGGCGCGA TAAAGATCT TAT AGGGCTTTA TTTTTCTTCAATGAA waaP 3999755 - 4000561 + | lipopolysaccharide core biosynthesis protein waaL 4000604 - 4001611 + | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase waaY 4001637 - 4002344 + | lipopolysaccharide core biosynthesis protein waaJ 4002369 - 4003382 + | putative UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase waaD 4003391 - 4004533 + | lipopolysaccharide 1,2-N- acetylglucosaminetransferase TERM 5017 4004563 - 4004535 - T 89 -11.1 -4.15222 | opp_overlap 4004541, overlap 4004541 ATTGGTTTGAATAAA TAAAAAGGCCGCA TTA TGCAGCCTTTTTT ATTTTTTACTTGTTT TERM 5018 4004541 - 4004557 + T 100 -7.9 -6.04324 | opp_overlap 4004535 4004541 TTGAATAAATAAAAA GGCCGCA TTA TGCAGCC TTTTTTATTTTTTAC TERM 5019 4004557 - 4004541 - T 100 -10.1 -5.47159 | opp_overlap 4004541, overlap 4004535 TTGAATAAATAAAAA GGCCGCA TTA TGCAGCC TTTTTTATTTTTTAC waaI 4005777 - 4004569 - | lipid A-core, surface polymer ligase TERM 5020 4005276 - 4005265 - G 74 -2.2 -5.10461 | TGCAGGGAATAAAAA GACC ATCG AGTC AGAAATGCTACGGTG rfaC 4006736 - 4005774 - | ADP-heptose:LPS heptosyl transferase I rfaF 4007816 - 4006770 - | ADP-heptose:LPS heptosyltransferase II TERM 5021 4007715 - 4007688 - G 76 -9.2 -3.7941 | gap 1, opp_overlap 4007688 4007703 CATCCGCGATAATAA TG-GACGGCACCA TGC CGGTGCCATCACA TCGATTATCGCCTGG rfaD 4008758 - 4007826 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 5022 4008165 - 4008177 + g 73 -9.1 -3.65522 | overlap 4008154 ACCTTCGAACAGCTT CGGTG ATT CACCG TTATTAAGCTGGGTG TERM 5023 4008337 - 4008353 + g 81 -6.5 -4.77036 | opp_overlap 4008337 AGGAATTTTGAGTAA CCGTAGA CAT TCAACGG TTTTTCGTACTCGCG TERM 5024 4009020 - 4009030 + H 72 -2.6 -4.94703 | ACATTCTGTTAATAT TTAT GAT ATAA TTCTTTTTTTATATT TERM 5025 4009401 - 4009388 - H 76 -2.3 -5.32944 | opp_overlap 4009395 4009396, overlap 4009389 4009397 TCGACAATTAAAAAA CCCAG AGTA CTGGT CACCAGAGTATGTTT TERM 5026 4009993 - 4009964 - H 75 -10.9 -2.95091 | opp_overlap 4009964 4009971, overlap 4009971 ATGCCAACTGAGATA GGAAAAATGATGC TTTG GCATCATTTTTTC TTTTTATATCAATGC TERM 5027 4009964 - 4009993 + H 100 -13.1 -4.99035 | opp_overlap 4009964 4009971, overlap 4009971 ATGCCAACTGAGATA GGAAAAATGATGC TTTG GCATCATTTTTTC TTTTTATATCAATGC TERM 5028 4009986 - 4009971 - H 84 -7.6 -4.84527 | opp_overlap 4009964 4009971, overlap 4009964 CTGAGATAGGAAAAA TGATGC TTTG GCATCA TTTTTTCTTTTTATA TERM 5029 4009971 - 4009986 + H 100 -7.6 -5.98675 | opp_overlap 4009971 4009964, overlap 4009964 CTGAGATAGGAAAAA TGATGC TTTG GCATCA TTTTTTCTTTTTATA kbl 4010194 - 4011390 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 5030 4011577 - 4011560 - g 74 -2.7 -5.00884 | AGTGGTCGCAAAAAA CCATC CCGGTGCC GATGG TCGTGGGCCATGAAT tdh 4011400 - 4012425 + | L-threonine 3-dehydrogenase TERM 5031 4012435 - 4012452 + F 100 -12.7 -4.53303 | opp_overlap 4012435 GATTAACACGAACAA GGGCTGG TATT CCAGCCC TTTTATCTGAGGATA TERM 5032 4012452 - 4012435 - f 93 -12.7 -3.83155 | opp_overlap 4012435 GATTAACACGAACAA GGGCTGG TATT CCAGCCC TTTTATCTGAGGATA S4112 4012655 - 4012930 + | IS1 orfA S4113 4012849 - 4013352 + | IS1 orfB yibD 4013434 - 4013574 + | putative regulator yibQ 4014394 - 4013561 - | hypothetical protein TERM 5033 4013748 - 4013768 + g 88 -8.2 -4.59109 | opp_overlap 4013741 CCACGGAACGGATTA CGCGGTGC ATCAG GCACAGCG TTTTTCGGCGGTGTA TERM 5034 4014388 - 4014398 + g 77 -6.8 -4.48987 | opp_overlap 4014385 TAGCGGAAGGCATCG CCAG CAC CTGG TTTTCGTTGTGCGGG yibP 4015807 - 4014524 - | hypothetical protein TERM 5035 4015200 - 4015218 + g 78 -8.9 -4.27474 | overlap 4015185 TTCGCCTGTTGGGCG CGCTGTT CATAT AACAGCG TTTGTTGCTCGCTTT TERM 5036 4015415 - 4015453 + g 75 -5 -4.77036 | overlap 4015417 4015445 GCCCTGACGGAATGC GGCATCCAGTTGTGCGGC GAG GCTGCGCTCCTGGGCGGC TTTTTGCTGCTCCAG TERM 5037 4015746 - 4015697 - G 81 -9.3 -4.07568 | gap 1, opp_overlap 4015699, overlap 4015709 CGCGTGGGCGGAAAA GGCGCACAACAATACGCCAGCGCT AAG AACGCTGGCGTAG-ATGATGGGCC TGATTGCAAACCTGC TERM 5038 4015735 - 4015709 - G 100 -17.4 -3.81022 | opp_overlap 4015699, overlap 4015697 AAAGGCGCACAACAA TACGCCAGCGCT AAG AACGCTGGCGTA GATGATGGGCCTGAT yibO 4017361 - 4015817 - | phosphoglyceromutase yibN 4017606 - 4018037 + | hypothetical protein grxC 4018179 - 4018430 + | glutaredoxin 3 secB 4018493 - 4018960 + | preprotein translocase subunit SecB TERM 5039 4018962 - 4018946 - f 86 -10.9 -3.69283 | overlap 4018938 GAAGGTACTGAAGAA CATCAGG ATG CCTGATG AACCAACGTAATGCT TERM 5040 4019066 - 4019040 - g 78 -8.7 -4.1552 | gap 1 TACCCTGGCAAGAAA TGGCCAC-GAGG TTGT CCTCTGGGGCCA TGACCCTGAACATAT gpsA 4018960 - 4019979 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 5041 4020005 - 4020034 + F 82 -11.5 -3.56987 | gap 1, overlap 4020009 CCTTTGTTACCGCTA TGACCCGGCCCG CGCAGAA CGGGCCGG-TCA TTATCTCATCGTGTG TERM 5042 4020009 - 4020031 + F 82 -13.4 -2.90888 | overlap 4020005 TGTTACCGCTATGAC CCGGCCCG CGCAGAA CGGGCCGG TCATTATCTCATCGT TERM 5043 4020543 - 4020507 - g 70 -3.6 -4.7254 | opp_overlap 4020508 4020529, overlap 4020508 ACCCGGCAGCAAAAA TTGGCCGTGGCATTAT GCTCG ACCACGCCACGGGCAT CGTTGTGGGTGAAAC cysE 4020059 - 4020880 + | serine acetyltransferase yibK 4021406 - 4020933 - | putative tRNA/rRNA methyltransferase YibK TERM 5044 4021430 - 4021408 - R 77 -12 -2.79302 | opp_overlap 4021397 ACGATGTTTAGCATA CTGCCCCC TTAGTGC GGGGGCAG GATAGCAGAAAATTG lldD 4022792 - 4021602 - | L-lactate dehydrogenase TERM 5045 4022676 - 4022694 + g 72 -11 -3.05343 | overlap 4022678 TTCTGACAAATCTTC CACGTTGC GGC GCAGCGTG TATTCAGAATATGCA lldR 4023565 - 4022789 - | DNA-binding transcriptional repressor LldR TERM 5046 4023007 - 4022995 - G 80 -5.5 -5.02074 | TCAGTTGTGAAAAAA CCGGT GGC ACCAG ATACATCCGCTGACG lldP 4025220 - 4023565 - | L-lactate permease TERM 5047 4024164 - 4024185 + g 70 -5.8 -4.1822 | TAGCCTCGCTGACCA CTGGTGGC ATACGG GCAACCAG TTTATTGAGGTACGG TERM 5048 4025491 - 4025466 - H 100 -14.1 -4.86731 | opp_overlap 4025461 4025466 GTCTGGTAAAGAAAA GGGCAATCCTC ATCA GAGAATTGCCC TTAGATTGTTGACCC TERM 5049 4025466 - 4025491 + H 79 -11.9 -3.28745 | opp_overlap 4025466, overlap 4025461 GTCTGGTAAAGAAAA GGGCAATCCTC ATCA GAGAATTGCCC TTAGATTGTTGACCC TERM 5050 4025520 - 4025548 + H 100 -17.6 -3.71917 | CCGGAGCGCCTTATC TTGCCTGATGCG CGTAA CGCATCAGGCAA TTTGGCGTTTGCCCT S4130 4031481 - 4031756 + | IS1 orfA S4131 4031675 - 4032178 + | IS1 orfB yibL 4032659 - 4032297 - | hypothetical protein TERM 5051 4033149 - 4033167 + r 76 -8.2 -4.10855 | GCAGGTAGAGGGGCA GTAAGCAG ACG TTGCTTAC TTTTGAAAGGCTTTT mtlR 4033751 - 4033164 - | mannitol repressor protein TERM 5052 4033323 - 4033296 - G 82 -12 -3.53012 | gap 1, overlap 4033297 GTCTGCTGGTTCAAA CTGTGGCGGCGGT GGT AACGCCGCCAC-G CAGTGCAGTTCACCA TERM 5053 4033323 - 4033297 - G 77 -12.2 -2.71712 | overlap 4033296 TCTGCTGGTTCAAAC TGTGGCGGCGGT GGT AACGCCGCCACG CAGTGCAGTTCACCA mtlD 4034899 - 4033751 - | mannitol-1-phosphate 5-dehydrogenase TERM 5054 4034516 - 4034534 + g 74 -7.4 -4.07885 | ATGACCTTTCAGCTG CGTGGTGC CGC GTACCATG TTTTCACAGGCGATG TERM 5055 4034983 - 4034964 - R 93 -13.6 -3.64703 | opp_overlap 4034959 TTTCCCTCACCCAAA CCCTCTCC GTGA GGAGAGGG TAGGATTGGATTACT mtlA 4036907 - 4034994 - | PTS system, mannitol-specific enzyme IIABC components TERM 5056 4035264 - 4035287 + g 75 -5.2 -4.59773 | opp_overlap 4035264 TGGCACCGCGATAGA CTCACCCAGA TAAG TCGGGGTCAG TTTTTCACGATCCAG TERM 5057 4035373 - 4035406 + g 70 -10.4 -3.21276 | overlap 4035371 GCAAAACGAATCGCT TCTTCTTTGGTTGC TGCTTT GCGACCGAGGAAGA TGTTCTCCGCGCCCA TERM 5058 4037168 - 4037183 + H 85 -3.3 -5.50723 | opp_overlap 4037168 AAAATGGCATTTAAA TGTGA GTAATG TCACA TTTTTGTTTTGATGG yibI 4037444 - 4037806 + | hypothetical protein TERM 5059 4037960 - 4037934 - g 74 -7.4 -4.09685 | gap 1 TTTTACCGCGCAAAA GGCAGTGATAG CGATCC CTATCAC-GCC ACAGGTGACGGGAAT TERM 5060 4038497 - 4038477 - g 78 -12.5 -2.91264 | CCGCCCAGGTACATA CGCAGCTGC CTT GCCGCTGCG TCCGGTGATGGTCTT yibH 4037809 - 4038894 + | hypothetical protein TERM 5061 4038994 - 4039007 + G 88 -5.3 -5.31072 | TAGCTACACCAGCCC GTTTG TACG CAAAC TTTTTATTCTGTTGT TERM 5062 4039422 - 4039436 + G 70 -10 -3.1544 | CCGATACGGTCAATC TGGCGA CTA TCGCCA TTGCCTGTGCTGTCG yibF 4038965 - 4039573 + | glutathione S-transferase selA 4039671 - 4041062 + | selenocysteine synthase TERM 5063 4041466 - 4041487 + G 76 -9.5 -3.85698 | opp_overlap 4041451 4041466 GGTTCTGCGGGAATA CGGTTTTGC TGAG GCAAAACTG TTTATCACCGCAGCA TERM 5064 4042872 - 4042882 + G 70 -6.8 -4.08557 | overlap 4042846 GAAATGATCATTTAT TGCG CGA CGCA TTATTATTTCCGGAA selB 4041059 - 4042903 + | selenocysteinyl-tRNA-specific translation factor TERM 5065 4042964 - 4042990 + F 100 -8.1 -5.13741 | opp_overlap 4042964 ATGATTTTAAATAAA GCACATTGTTT AATGA ATACAATGTGC TTTTTATTAGATTAA TERM 5066 4042990 - 4042964 - f 81 -8.1 -4.44448 | opp_overlap 4042964 ATGATTTTAAATAAA GCACATTGTTT AATGA ATACAATGTGC TTTTTATTAGATTAA yiaY 4043093 - 4044244 + | putative alcohol dehydrogenase TERM 5067 4044259 - 4044281 + F 93 -9.8 -4.65838 | opp_overlap 4044260, overlap 4044260 ATCATCATTCCAACA ACGGCTGGCA AAT TGTCAGCCGC TTTTTCAACTATCTC TERM 5068 4044260 - 4044280 + F 86 -13.3 -3.3878 | opp_overlap 4044260, overlap 4044259 TCATCATTCCAACAA CGGCTGGCA AAT TGTCAGCCG CTTTTTCAACTATCT TERM 5069 4044280 - 4044260 - f 86 -11.1 -3.66018 | opp_overlap 4044260 4044259 TCATCATTCCAACAA CGGCTGGCA AAT TGTCAGCCG CTTTTTCAACTATCT TERM 5070 4044658 - 4044678 + G 85 -11.9 -3.66356 | overlap 4044663 GCGCACACCTCGGTG CAGGATCGC GCG GCGATTCTG TTTAAGATTGCCGAT TERM 5071 4045125 - 4045137 + G 71 -9.1 -3.55444 | opp_overlap 4045104 4045124 GACCTCGAAACGCAT CGCCA AAG TGGCG TTTACCGGCTCAACG aldB 4044319 - 4045947 + | aldehyde dehydrogenase B (lactaldehyde dehydrogenase) TERM 5072 4046510 - 4046522 + T 82 -7.7 -4.67478 | TTCCTGGACTATTTT GCACT GGG AGTGC TTATTTTTGTATTTC S4143 4047146 - 4046643 - | IS1 orfB S4144 4047340 - 4047065 - | IS1 orfA S4145 4048666 - 4047374 - | hypothetical protein S4147 4049504 - 4049001 - | IS1 orfB S4148 4049698 - 4049423 - | IS1 orfA yiaK 4050911 - 4049913 - | 2,3-diketo-L-gulonate reductase TERM 5073 4050913 - 4050925 + H 77 -3.3 -5.19261 | AATGTCACTTTCATC CTAGG CTT CCTTG TTTTTTGATCGCTTT yiaJ 4051111 - 4051959 + | putative regulator yiaI 4052061 - 4052534 + | hypothetical protein TERM 5074 4052567 - 4052537 - T 72 -9.1 -3.53444 | gap 1, opp_overlap 4052536 4052535, overlap 4052538 GCAGCCTGTTTGAAA CGTTTTCCGGCGTT TCTC AACGCCGGAATA-G TGCGCTTTGTTTATG avtA 4053938 - 4052685 - | valine--pyruvate transaminase TERM 5075 4052846 - 4052858 + g 71 -9.1 -3.54741 | GCCCCGGCACCATCA GCACG CCG CGTGC TTTCAGGCGCTGATA malS 4056146 - 4054116 - | periplasmic alpha-amylase precursor TERM 5076 4054191 - 4054173 - G 72 -6.6 -4.2461 | overlap 4054169 ATGCTCACGAACAAA GCCGTAGC CCT GCTTCAGC GAAAGTGTCGTTTGT TERM 5077 4055659 - 4055641 - G 72 -8.8 -3.80573 | opp_overlap 4055640 4055641 TCCAGCAGGAGTAAA CCGTTGCT GGT AGCAGCGG GTTGTAACGTTATTT TERM 5078 4056709 - 4056699 - g 71 -2.4 -4.92777 | overlap 4056692 AACACCAAGGAAAAA GGCG TTT CTCC GGACCGTAATGCCTT bax 4056466 - 4057290 + | hypothetical protein TERM 5079 4057305 - 4057334 + T 87 -10.1 -4.26903 | ATTTCATTTCCTCGA GCCTTATCTGATT TGTC GGTCGGATAAGGC TTTTGCTCGCATCAG TERM 5080 4058229 - 4058209 - T 72 -3.2 -4.98436 | GGAAGACCATAAAAA GCAAAGCG GTTAA CGCCTTTC TCTTTTAAATGCAAA TERM 5081 4058265 - 4058247 - T 78 -6 -4.81249 | opp_overlap 4058239 4058247 TTTTAAATGCAAAAA TGCGCT TTCAACC AGCGCA TAGTTATCGGTGGCA TERM 5082 4058637 - 4058606 - T 100 -12.4 -4.7078 | opp_overlap 4058613 TGAATCATGCAAAAA CTCAAAACCGGTAA TACG TAACCGGCTTTGAG AAAATTTTTATCAAA xylH 4059835 - 4058654 - | putative xylose transporter, membrane component xylG 4061354 - 4059813 - | xylose transporter ATP-binding subunit TERM 5083 4060105 - 4060115 + g 85 -6.8 -4.81083 | AGTAACAGACAGCGG GCGA GGA TCGC TTTTTGCTGATTGCC TERM 5084 4061428 - 4061400 - R 95 -12.4 -4.0641 | opp_overlap 4061419 CGGCATGGAGAGAAA TCACGCCCCCGC TCCGC GCCGGGGCGTAA CGCTTACAGCTCGCT xylF 4062424 - 4061432 - | D-xylose transporter subunit XylF TERM 5085 4063247 - 4063230 - H 74 -8.3 -3.86822 | TAACTGCTTTACAAA CCCTCGC TATG GCGCGGG TGCGGCGACGAACCC TERM 5086 4064134 - 4064162 + H 100 -9.6 -5.40072 | gap 1, opp_overlap 4064114, overlap 4064135 ACTGTGCAGTCCGTT GGCCCGGTTATCG GTAG CGATA-CCGGGCA TTTTTTTAAGGAACG TERM 5087 4064135 - 4064161 + H 95 -13.1 -3.83561 | gap 1, opp_overlap 4064114, overlap 4064134 CTGTGCAGTCCGTTG GCCCGGTTATCG GTAG CGATA-CCGGGC ATTTTTTTAAGGAAC TERM 5088 4065210 - 4065225 + G 77 -3.2 -5.04868 | opp_overlap 4065210, overlap 4065210 ACACCACACAATAAT CCCC AGGCGAAG GGGG TTTTCTTTGGTTTGA xylB 4064184 - 4065638 + | xylulokinase TERM 5089 4066082 - 4066100 + G 82 -2.4 -5.42131 | CAATGCTTATGAAAT GGTGAT CTACCCC ATCGCC TTTTTTGTCTGCTTG yiaB 4065807 - 4066148 + | hypothetical protein yiaA 4066194 - 4066631 + | hypothetical protein TERM 5090 4066641 - 4066666 + T 75 -6.1 -4.43477 | opp_overlap 4066641 GAATAATTCACGTAA GCCCGGTCA GTCCAATG TGAACGGGC TTTTACTTAACTCAC yiaH 4067668 - 4066673 - | hypothetical protein TERM 5091 4067513 - 4067501 - G 71 -3.3 -4.84363 | GGAAATCATGAAAAA TAGCG GCA CGCTG ACACGAGAGGCAGAA TERM 5092 4068036 - 4068018 - H 75 -3 -5.14563 | overlap 4068020 CCGGCGAGCAAAAAA TCGACGTC ACC GCCTTCGA ACAGTTCCAGGGAAG TERM 5093 4068942 - 4068924 - g 70 -6.7 -4.12254 | gap 1 CAGTACGAGAAAGAA GCG-CAGC AGCT GCTGGCGC TGGAAAATCCGCTGC glyQ 4068237 - 4069148 + | glycyl-tRNA synthetase subunit alpha TERM 5094 4069717 - 4069727 + G 72 -8.2 -3.85698 | CCGATCGCGTGATTC GCGG CCA CCGC TTTATGGGCGAACCG glyS 4069158 - 4071227 + | glycyl-tRNA synthetase subunit beta TERM 5095 4071246 - 4071263 + T 100 -12.7 -5.1861 | opp_overlap 4071246 CGCCGTTATTAAAAA GCCTGCC ATCT GGCAGGC TTTTTTGGTAATGAC TERM 5096 4071263 - 4071246 - T 100 -12.7 -4.72272 | opp_overlap 4071246 CGCCGTTATTAAAAA GCCTGCC ATCT GGCAGGC TTTTTTGGTAATGAC S4167 4071788 - 4071285 - | IS1 orfB S4168 4071982 - 4071707 - | IS1 orfA TERM 5097 4072050 - 4072082 + H 72 -8.5 -3.70863 | overlap 4072052 ACCTACATCATCTAC CAGCTATCGCCTGAT AAA GTTAGGTGATAGCTA TTTCAATACTCTCTG TERM 5098 4072052 - 4072080 + H 79 -11.1 -3.43109 | overlap 4072050 CTACATCATCTACCA GCTATCGCCTGAT AAA GTTAGGTGATAGC TATTTCAATACTCTC TERM 5099 4072139 - 4072155 + H 77 -3.7 -5.10767 | ACTCCCATTCCTGAT TGCTTAA TAA TCAAGCA TTTTTATCTTGAATG S4169 4072203 - 4072499 + | hypothetical protein TERM 5100 4075682 - 4075649 - T 79 -12.6 -2.92667 | opp_overlap 4075649, overlap 4075646 4075651 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 5101 4075649 - 4075682 + T 100 -14.8 -3.78953 | opp_overlap 4075646 4075649 4075651 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 5102 4075928 - 4075915 - T 70 -9.5 -2.99057 | overlap 4075912 TGCGAAAGAGAACTA GCCGG TAGC CCGGC AGAAATCATCAGGGA yhiW 4076728 - 4076000 - | putative ARAC-type regulatory protein TERM 5103 4077053 - 4077071 + r 100 -5.2 -6.06529 | GCAGACTATCCTCTT CCCGGT CCCCTAT GCCGGG TTTTTTTTATGTCTG yhiX 4077920 - 4077096 - | DNA-binding transcriptional regulator GadX TERM 5104 4078274 - 4078228 - R 86 -10.9 -3.72324 | opp_overlap 4078232, overlap 4078232 TATTGCGATTAATAA GCAACCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGGTTTT TACAACGTTATGTTA TERM 5105 4078232 - 4078270 + r 100 -18.3 -4.60255 | opp_overlap 4078228 4078232 GCGATTAATAAGCAA CCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGG TTTTTACAACGTTAT TERM 5106 4078270 - 4078232 - R 100 -16.1 -3.56142 | opp_overlap 4078232, overlap 4078228 GCGATTAATAAGCAA CCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGG TTTTTACAACGTTAT gadA 4079690 - 4078290 - | glutamate decarboxylase isozyme TERM 5107 4079891 - 4079866 - R 100 -14.1 -5.08601 | opp_overlap 4079862 TTATCGTAATAAAAA TCGCCCAAACA TTCC TGTTCGGGCGA TCAAATTAATTATTG yhjA 4081298 - 4079901 - | putative cytochrome C peroxidase TERM 5108 4080286 - 4080300 + g 75 -7.1 -4.34402 | TAGCCTTTTTTCTGT TGCGC CGTCA GCGCA TTTTCATCTCCACGC TERM 5109 4080420 - 4080443 + g 70 -3.8 -4.62471 | gap 1, overlap 4080423 CGGATAAACTTCGAG GAACTGC-GCT TTA AGCTGCGGATC TTTTTCCAGCTTAGC S4175 4081860 - 4081357 - | IS1 orfB S4177 4082054 - 4081779 - | IS1 orfA TERM 5110 4082254 - 4082238 - H 74 -3.7 -4.92363 | AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGCGTTAGTGC TERM 5111 4083433 - 4083401 - g 100 -13.6 -4.55128 | opp_overlap 4083401 AGCCTGAAATTAAAA GGTCTGACTCCAAT TGAAT ATCGGAATCAGACC TATATGCCTCGTGTA S4178 4082600 - 4083451 + | IS150 putative transposase TERM 5112 4083863 - 4083844 - T 100 -11.4 -6.32976 | opp_overlap 4083844 4083842 4083857 4083861 AAAAAAATAAAAAAA TCCCCGCC AAAT GGCAGGGA TCTTAGATTCTGTGC cspA 4084104 - 4083892 - | major cold shock protein TERM 5113 4084358 - 4084339 - R 100 -13.6 -4.08692 | TAATCGGTTGGAAAA CGGTCCTG TCAT CAGGACCG TAAACAGCAATAAAG yiaG 4084675 - 4084550 - | hypothetical protein yiaF 4084989 - 4085819 + | hypothetical protein TERM 5114 4085847 - 4085829 - T 82 -7.4 -4.55446 | opp_overlap 4085829 CAATAAAGAGTAAAA GCCCGA GCGATTA TCGGGC TTTACTTCACGCAGT TERM 5115 4085829 - 4085847 + T 71 -7.4 -3.90291 | opp_overlap 4085829 CAATAAAGAGTAAAA GCCCGA GCGATTA TCGGGC TTTACTTCACGCAGT yiaE 4086843 - 4085869 - | 2-hydroxyacid dehydrogenase TERM 5116 4086937 - 4086910 - R 100 -14.3 -3.82481 | AGGAAAACTGAAGAA TGCCAGGTGAT TTCTGC ATCACCTGGCA TGAAAGGGATTACAG yiaD 4087573 - 4086947 - | putative outer membrane lipoprotein TERM 5117 4088439 - 4088410 - g 72 -4.3 -4.61231 | gap 1, opp_overlap 4088379 4088432 4088438, overlap 4088411 TGACAGTGGGAAAAA GCTGATCTGCATTG ATC CAATGC-GATCGGA AACCGTCGATTTCTT TERM 5118 4088647 - 4088635 - g 81 -6.2 -4.74706 | overlap 4088636 CGGAATAGCGAAAAA CGCC GAATG GGCG GCAGAGATTTGTGGT TERM 5119 4088728 - 4088710 - g 70 -6 -4.2558 | overlap 4088712 TATTTTCCACCAAAA TACCACCA TGC TGATGGCA GGCTGGGGAATGCAG TERM 5120 4089999 - 4089977 - g 73 -11.3 -2.66695 | overlap 4089976 4089974 GTGCTGACCAAAGAT CTCCCCAGC TCGCG GCTGGGGAA TGGCTGTGCGGGTAA bisC 4087814 - 4090093 + | biotin sulfoxide reductase yiaC 4090502 - 4090062 - | hypothetical protein tag 4091062 - 4090499 - | 3-methyl-adenine DNA glycosylase I TERM 5121 4090891 - 4090906 + g 83 -6.1 -5.00884 | ACTGATGAAAGTAGG CGCGA TAGTTT TCGCG TTTTTTGAGGACGGT TERM 5122 4091628 - 4091658 + G 79 -12.6 -3.06133 | overlap 4091630 ACCGATCCGTTATGG CATGCCAGCGTGAG TAG CTTAGGCTGGCGTG TTGACTCCCGGCTTG yhjY 4091220 - 4091918 + | putative lipase TERM 5123 4092053 - 4092067 + F 78 -6.4 -4.56775 | overlap 4092054 TTCATTCCGTTCTGA TGGCAT TTC ATGCCG TTTTTCCCCAAGCAT yhjX 4092147 - 4093355 + | putative resistance protein TERM 5124 4093440 - 4093457 + F 100 -12.7 -4.88129 | opp_overlap 4093438 4093437 TGACTCGTAAAATTT GGGCCAG TTAA CTGGCCC TTTTTACTGCTTTTT yhjW 4093679 - 4095370 + | phosphoethanolamine transferase TERM 5125 4095567 - 4095549 - f 83 -8.8 -4.25074 | opp_overlap 4095550, overlap 4095550 GACCAAATTCGAAAA GCCTGCTC AAC GAGCAGGT TTTTTTGCATTTGTA TERM 5126 4095566 - 4095550 - f 81 -12.3 -3.14321 | opp_overlap 4095550, overlap 4095549 ACCAAATTCGAAAAG CCTGCTC AAC GAGCAGG TTTTTTTGCATTTGT TERM 5127 4095550 - 4095566 + F 100 -12.3 -5.59564 | opp_overlap 4095550 4095549 ACCAAATTCGAAAAG CCTGCTC AAC GAGCAGG TTTTTTTGCATTTGT TERM 5128 4097138 - 4097122 - g 81 -9.5 -4.02424 | ATGAAGCAGGATAAA TCCATCA ACC TGATGGA AATGCCGGGGCTGAA dppA 4096282 - 4097889 + | dipeptide transport protein dppB 4098197 - 4099216 + | dipeptide transporter permease DppB dppC 4099226 - 4100128 + | dipeptide transporter TERM 5129 4100238 - 4100189 - g 70 -10.7 -2.83403 | gap 1, overlap 4100166 4100188 TTTCGGCGACGAAAG CGCACCGTTCCGCGCCGTAGACCG CAT CAG-CTACAGCGTAAAACAGGGCG AAGTGGTCGGGATTG dppD 4100139 - 4101122 + | dipeptide transporter ATP-binding subunit dppF 4101119 - 4102123 + | dipeptide transporter ATP-binding subunit TERM 5130 4102151 - 4102133 - T 77 -7.3 -4.4715 | opp_overlap 4102133 CGTTAACTCACAAAA CCGGGGC CATGC GCTCCGG TTTACTCAATCAGCT TERM 5131 4102133 - 4102151 + T 79 -9.5 -3.76402 | opp_overlap 4102133 CGTTAACTCACAAAA CCGGGGC CATGC GCTCCGG TTTACTCAATCAGCT yhjV 4103424 - 4102153 - | putative transporter protein TERM 5132 4103833 - 4103792 - R 100 -13.2 -4.60797 | gap 2, opp_overlap 4103794 GCTGGAGAGAGAAAA CCCCCGC-ACGTTG-CAGGT ATGT ACCTGACAACATAACGGGGG CTAATCTTGAACCTA TERM 5133 4104058 - 4104083 + r 100 -14 -4.72272 | TTTGCGCCCGGACCA GGCCGCAGGG GTGAAA CTCTGCGGCC TTTTTCGTAAGAAAA TERM 5134 4104112 - 4104100 - R 83 -6.3 -5.06414 | TTTTCGTAAGAAAAA TGCAA CGG TTGCA AGCGGATAATATTCT TERM 5135 4104316 - 4104275 - R 100 -13.2 -4.60797 | gap 2, overlap 4104311 GCTGGAGAGAGAAAA CCCCCGC-ACGTTG-CAGGT ATGC ACCTGACAACATCACGGGGG CCATTCTTGAACCCA TERM 5136 4104541 - 4104566 + r 100 -16.2 -4.81685 | TTTGCGCCCGGATCA GGCCGCAGAG GTTAAA CTCTGCGGCC TTTTTCGTGCTTACT yhjU 4106256 - 4104577 - | hypothetical protein TERM 5137 4105279 - 4105265 - G 74 -2.7 -5.00884 | opp_overlap 4105265 ACTTCTTTCAAAAAA CCGCC GAACT GGCCG TTATGTCCCATCATC yhjT 4106444 - 4106253 - | hypothetical protein yhjS 4108012 - 4106441 - | putative protease yhjR 4108285 - 4108473 + | hypothetical protein yhjQ 4108485 - 4109237 + | cell division protein TERM 5138 4109453 - 4109471 + F 71 -10.2 -2.64765 | overlap 4109448 ATCAACGCCTCGCGT CCGCGTCC GCT GGACCCGG TCCGTTATCTCATTC TERM 5139 4109538 - 4109526 - f 70 -4.7 -4.42062 | opp_overlap 4109536, overlap 4109534 4109535 CATCGCGCAAAGAAA CGCCG AAA CCGCG CAGCGGGCATTTTCA TERM 5140 4109544 - 4109534 - f 72 -8.2 -3.671 | opp_overlap 4109536, overlap 4109526 4109535 AAAGAAACGCCGAAA CCGC GCA GCGG GCATTTTCAGGTCTG yhjN 4111892 - 4114201 + | cellulose synthase regulator protein TERM 5141 4115149 - 4115137 - g 75 -6.9 -4.36914 | opp_overlap 4115136, overlap 4115138 4115139 GCCTTTTTTACAAAA CCGCG ATG CGCAG GCAGTTCAGCGCCAG yhjM 4114208 - 4115314 + | endo-1,4-D-glucanase TERM 5142 4115394 - 4115372 - f 79 -12 -3.22298 | TCGAGGCAGCACCAA CCATCAGCAG ACC CTGCGGATGG ACAGCGGCAACACTA TERM 5143 4115481 - 4115460 - f 73 -4.4 -4.83615 | gap 1, opp_overlap 4115460 CAGTCGCCAGAAAAA GCTGAAGCG TTTAT CGCCTC-GC TCTCTGCCAGCCAGC yhjK 4117746 - 4119695 + | putative phosphodiesterase TERM 5144 4119733 - 4119754 + F 73 -4.4 -4.7657 | opp_overlap 4119729 4119727 CTTTAAAAAGTGCTG GTTTGTGC GAGCCA GCTCAAAC TTTTTAACCTTTTTG TERM 5145 4120107 - 4120119 + G 74 -7.7 -4.08317 | opp_overlap 4120089 GTCGGTCGTACCGGC GCAGT CGC ACTGC TTTACTTTGAAATTG dctA 4119885 - 4121171 + | C4-dicarboxylate transporter DctA TERM 5146 4121184 - 4121213 + F 72 -9.3 -3.59315 | overlap 4121186 TAATCTCACCACTTA TGCCCGCACTC CCTTCCCC GAGTGCGGGTG TTTGCGCATAATTGA TERM 5147 4121186 - 4121211 + F 82 -11.9 -3.37259 | overlap 4121184 ATCTCACCACTTATG CCCGCACTC CCTTCCCC GAGTGCGGG TGTTTGCGCATAATT TERM 5148 4121237 - 4121265 + F 100 -14 -4.52669 | opp_overlap 4121247 TAATTGACCCCTGTG CCTGAACTTACC ACCTG GGTGAGTTCAGG TTTATTTCACTTCTT TERM 5149 4121338 - 4121355 + F 93 -6.9 -5.7946 | TTAACGTCATTTAGA CTGACCG ACAA CGGGCAG TTTTTTTATTACCAG yhjJ 4121392 - 4122888 + | hypothetical protein TERM 5150 4122935 - 4122966 + T 76 -8 -4.24948 | overlap 4122936 AGGTATTTATGGATG AGCTGGATAGAGGG GTAA CACTTTATCCAGCC TTTTGCATATGCTGC TERM 5151 4122936 - 4122965 + T 77 -11.5 -3.14487 | overlap 4122935 GGTATTTATGGATGA GCTGGATAGAGGG GTAA CACTTTATCCAGC CTTTTGCATATGCTG kdgK 4124132 - 4122984 - | ketodeoxygluconokinase TERM 5152 4123135 - 4123148 + g 82 -3.1 -5.27335 | GAGTCGCCAGCTGCG GTGGT ATCG ATCAC TTTTTCTTTCGGCAG yhjH 4124145 - 4124912 + | EAL domain-containing protein TERM 5153 4125042 - 4125064 + G 72 -7 -4.1899 | overlap 4125034 TTGTTGTTGATTGTC GTGGCGATCA TTT TGATTGCAAC TTTTGACTGGAATCG yhjG 4124982 - 4127042 + | hypothetical protein TERM 5154 4127042 - 4127081 + T 73 -10.2 -2.9916 | gap 1, opp_overlap 4127039 4127049, overlap 4127041 GCAGATGAAGAAGTG ATG-ATAATTGCCGGATGT CTG ACATCCGGCAATTAAACAG ATTTAGATTTTTGGC TERM 5155 4127073 - 4127049 - T 100 -17.3 -3.45434 | opp_overlap 4127042 4127041, overlap 4127039 AAGAAGTGATGATAA TTGCCGGATGT CTG ACATCCGGCAA TTAAACAGATTTAGA yhjE 4128546 - 4127224 - | putative transport protein TERM 5156 4127568 - 4127588 + g 91 -11.9 -4.07568 | opp_overlap 4127562 4127559 CGAACAGGATGATCA GCGTGGTGA TGA TCACCATGC TTTTACGGCGACCAA TERM 5157 4127955 - 4127944 - G 70 -5.8 -4.27117 | CGCCGAGAAGATAAA TGGC ACAC GCCA GCCCCAGCTCATAAA TERM 5158 4128310 - 4128300 - G 75 -4.6 -4.86773 | CAAAATGACCAAAAA CGGC AGA GCCA ATGGGGCGCGCGACG TERM 5159 4128465 - 4128445 - G 79 -9.7 -3.73106 | GTAAAAGTCGAAGAA CTCAATGGC CGT GCCAATGAG AGAGGCGACAAGGAC TERM 5160 4128890 - 4128859 - R 82 -13 -2.78596 | opp_overlap 4128865 4128868 TATGTGCGCATTATA GCCGGATGCGATGC TGGC GCATCTTATCCGGC CTACGGGGAGCCAGG TERM 5161 4128955 - 4128918 - R 71 -10.5 -2.62512 | opp_overlap 4128919 4128922 4128950, overlap 4128917 4128916 4128931 AGGCCGAATAAAATC GTATGCCGGATAAGGCG TTTA CGCCGCATCCGGCCTAT TTTAAGGCTGCGTTT TERM 5162 4128919 - 4128954 + r 95 -11.8 -4.1196 | opp_overlap 4128918 4128917 4128916 4128931, overlap 4128922 4128950 GGCCGAATAAAATCG TATGCCGGATAAGGCG TTTA CGCCGCATCCGGCCTA TTTTAAGGCTGCGTT TERM 5163 4128922 - 4128951 + r 82 -13.5 -2.79004 | opp_overlap 4128918 4128917 4128916 4128931, overlap 4128919 4128950 CGAATAAAATCGTAT GCCGGATAAGGCG TTTA CGCCGCATCCGGC CTATTTTAAGGCTGC yhjD 4129970 - 4128957 - | hypothetical protein yhjC 4130990 - 4130019 - | putative transcriptional regulator LYSR-type TERM 5164 4130882 - 4130848 - G 72 -4.8 -4.62772 | opp_overlap 4130848 4130849, overlap 4130849 4130850 GGCAAAGCAAAGAAA TCCGCCGCGCGGGAAA AAC TTTCCAGCTCCGCGAC TTTGATGAACAACTG yhjB 4131438 - 4132040 + | putative regulator TERM 5165 4132045 - 4132074 + T 89 -9.3 -4.59109 | opp_overlap 4132046 4132047, overlap 4132047 TCTCCTCCTGAAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5166 4132073 - 4132046 - T 85 -12.8 -3.33696 | opp_overlap 4132045 4132047, overlap 4132047 CTCCTCCTGAAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 5167 4132072 - 4132047 - T 90 -16.3 -2.60075 | opp_overlap 4132045 4132047, overlap 4132046 TCCTCCTGAAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 5168 4132047 - 4132072 + T 100 -16.3 -3.90762 | opp_overlap 4132047 4132046, overlap 4132045 TCCTCCTGAAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S4216 4133384 - 4132056 - | IS4 orf TERM 5169 4133392 - 4133417 + r 72 -9.1 -3.61398 | opp_overlap 4133392 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 5170 4133417 - 4133392 - R 100 -9.8 -5.61596 | opp_overlap 4133392 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 5171 4133485 - 4133528 + r 82 -11.2 -3.51329 | opp_overlap 4133488, overlap 4133466 4133488 TCCTCCTGAAGAGGA TAATTTTACAGCCAGCAG GAAGTTAG CGGCTGGCTGTAAAAATA TTATGGTTCGCCGTA TERM 5172 4133525 - 4133488 - R 90 -12.9 -3.52073 | opp_overlap 4133485 4133488 TCCTGAAGAGGATAA TTTTACAGCCAGCAG GAAGTTAG CGGCTGGCTGTAAAA ATATTATGGTTCGCC TERM 5173 4133488 - 4133525 + r 81 -12.9 -2.59447 | opp_overlap 4133488, overlap 4133485 TCCTGAAGAGGATAA TTTTACAGCCAGCAG GAAGTTAG CGGCTGGCTGTAAAA ATATTATGGTTCGCC treF 4135178 - 4133529 - | trehalase TERM 5174 4133571 - 4133557 - G 74 -7.8 -4.06001 | opp_overlap 4133557, overlap 4133532 4133529 TACAAACCAATTAAA CGGCGT ACC ACACCG TTAGTCCAGCCAAAC S4218 4135449 - 4135724 + | IS1 orfA S4219 4135643 - 4136146 + | IS1 orfB TERM 5175 4137206 - 4137244 + T 75 -9.6 -3.56594 | gap 1, overlap 4137230 4137231 GTTAAAGGTGATGCG GGCATTGCTGGCGGTAG AGAGCG CTTTCGCCAGCGA-GCC TTTGGCGGAGTTTAG TERM 5176 4137313 - 4137332 + T 70 -9.4 -3.31415 | AATCGCCCTGGTTCA CTTTATCG CCTT CGATAAAG TTGCGTTTAATGATA TERM 5177 4137469 - 4137486 + T 70 -9.8 -2.97475 | overlap 4137468 CCTCAGGCGTCATGG CGGCGG CGTTTT CCGCCG ATTTGTCATCGCAGG TERM 5178 4137735 - 4137717 - T 95 -3.1 -6.02345 | overlap 4137718 CAACGACAAAAAAAA TGTTGCC GTTCT GCCAACA GTTCCTGCCAGCATT yhiE 4138425 - 4137898 - | hypothetical protein TERM 5179 4138778 - 4138798 + r 100 -14.1 -4.65263 | opp_overlap 4138778 CTTGTTTCGACTTAA GCTGGCAAT TGG ATTGCCAGC TTTCTTTTAACGCAT TERM 5180 4138798 - 4138778 - R 85 -14.1 -3.05384 | opp_overlap 4138778 CTTGTTTCGACTTAA GCTGGCAAT TGG ATTGCCAGC TTTCTTTTAACGCAT TERM 5181 4139207 - 4139173 - R 100 -15.9 -3.26545 | opp_overlap 4139183 4139203, overlap 4139174 CGGAGAGAGTATTAA TCGGATCATAGTCAC ATCAA GTGACTATGATCCGG GTGACAACCGGGGTA TERM 5182 4139206 - 4139174 - R 100 -19.4 -2.55606 | opp_overlap 4139183 4139203, overlap 4139173 GGAGAGAGTATTAAT CGGATCATAGTCAC ATCAA GTGACTATGATCCG GGTGACAACCGGGGT hdeD 4139796 - 4139224 - | acid-resistance membrane protein TERM 5183 4140201 - 4140214 + G 72 -6.7 -4.25283 | GACGAATCCTTCCAG CCAAC TGCA GTTGG TTTTGCTGAAGCGCT hdeA 4140051 - 4140383 + | acid-resistance protein TERM 5184 4140420 - 4140467 + F 73 -10.8 -3.00259 | gap 1, opp_overlap 4140424, overlap 4140424 TACTTCCTTGCATAT TGAACAGGCCGGAATATCTTCTT TAA AAGCAGCTATTCCT-CCTGTTCA TATATAATCTCTATA hdeB 4140487 - 4140825 + | acid-resistance protein TERM 5185 4140843 - 4140873 + T 100 -14.8 -4.93595 | opp_overlap 4140843 AGGTACAAGTAAAAA GGAGTAGCAAGTTG AGC CATCTTGCTGCTCC TTTTTGCATTTTTAT TERM 5186 4140873 - 4140843 - T 100 -12.6 -4.93968 | opp_overlap 4140843 AGGTACAAGTAAAAA GGAGTAGCAAGTTG AGC CATCTTGCTGCTCC TTTTTGCATTTTTAT yhiF 4142107 - 4141577 - | hypothetical protein TERM 5187 4142252 - 4142222 - R 80 -12.7 -3.10522 | opp_overlap 4142223 4142248, overlap 4142225 ATTTTATGTAATACA TGATGCAGATGCT GAGAA AGCATCTGCATCT TTCGGTGGTGTTATT TERM 5188 4142223 - 4142251 + r 100 -16.2 -3.72009 | opp_overlap 4142222 4142225, overlap 4142248 TTTTATGTAATACAT GATGCAGATGCT GAGAA AGCATCTGCATC TTTCGGTGGTGTTAT TERM 5189 4142249 - 4142225 - R 82 -13 -2.76322 | opp_overlap 4142223 4142248, overlap 4142222 TTATGTAATACATGA TGCAGATGCT GAGAA AGCATCTGCA TCTTTCGGTGGTGTT slp 4142862 - 4142263 - | outer membrane protein induced after carbon starvation TERM 5190 4142346 - 4142312 - G 74 -10.6 -3.14564 | GCATTGGTGTAGTAA GGCGCACCCCAGCCCG GTT CCGGCCAGAATGCACC ATAGCCGTAATCCCA TERM 5191 4143483 - 4143469 - R 70 -5 -4.50943 | opp_overlap 4143469 TAACAATGTAGAAAA CAAACC ATT GATTTG TTTGTCAAGATGTTG TERM 5192 4144685 - 4144713 + r 74 -11.1 -2.77503 | opp_overlap 4144681 4144680 4144678, overlap 4144681 4144712 GAGACAAAGAGTCAT TGCTTCTCCGATA AAA TGTCAGAGAAGCA TGATTACGTGGTTAT S4229 4145836 - 4144880 - | hypothetical protein S4230 4146370 - 4145867 - | IS1 orfB S4231 4146564 - 4146289 - | IS1 orfA arsR 4146620 - 4146964 + | DNA-binding transcriptional repressor ArsR TERM 5193 4147224 - 4147239 + G 90 -6.8 -5.08824 | TATCATCAGCCTGCT GCTGGA TGAG TCCGGC TTTTTTGAATGGGCA TERM 5194 4147320 - 4147341 + G 73 -9.3 -3.58343 | CTGGATTGTCCTGCT CGGTGCCGC CGTT GCGGCCCTG TTTGCCAATGATGGC arsB 4147018 - 4148307 + | arsenical pump membrane protein arsC 4148320 - 4148745 + | arsenate reductase S4235 4148901 - 4149176 + | IS1 orfB S4236 4149095 - 4149598 + | IS1 orfB TERM 5195 4149782 - 4149813 + T 70 -9.7 -3.0464 | gap 1, opp_overlap 4149791, overlap 4149791 GGTTTGAATCAGGAC GTAAAAAAACCGAC TTTGC GTCGG-TTTTTTAC TCTTCAGCCTGAGTT TERM 5196 4149791 - 4149805 + T 90 -7.1 -5.27779 | opp_overlap 4149791, overlap 4149782 CAGGACGTAAAAAAA CCGAC TTTGC GTCGG TTTTTTACTCTTCAG TERM 5197 4149805 - 4149791 - T 91 -7.1 -5.48825 | opp_overlap 4149791 4149782 CAGGACGTAAAAAAA CCGAC TTTGC GTCGG TTTTTTACTCTTCAG TERM 5198 4150015 - 4150047 + T 100 -16.6 -3.01791 | opp_overlap 4150024, overlap 4150024 TGTCCGAATCCGGAC GTAAAAAAACCGAC TTCGC GTCGGTTTTTTTAC TCTTCAGCCCAGAGT TERM 5199 4150024 - 4150038 + T 93 -7.1 -5.63374 | opp_overlap 4150024, overlap 4150015 CCGGACGTAAAAAAA CCGAC TTCGC GTCGG TTTTTTTACTCTTCA TERM 5200 4150038 - 4150024 - T 91 -7.1 -5.47218 | opp_overlap 4150015 4150024 CCGGACGTAAAAAAA CCGAC TTCGC GTCGG TTTTTTTACTCTTCA TERM 5201 4150476 - 4150502 + T 100 -13.8 -3.71649 | opp_overlap 4150467 4150476 CGGAAACGTAATTAA GGGCTAAGAGCA CAC TACTCTTAGCCC TTTAACATTTAACGC TERM 5202 4150502 - 4150476 - T 100 -16 -3.43217 | opp_overlap 4150476, overlap 4150467 CGGAAACGTAATTAA GGGCTAAGAGCA CAC TACTCTTAGCCC TTTAACATTTAACGC gor 4151863 - 4150511 - | glutathione reductase yhiR 4152777 - 4151935 - | hypothetical protein TERM 5203 4152252 - 4152266 + g 75 -5.6 -4.58773 | CTATCCCGCTGACCA CCGCCT GAT AGTCGG TTTTCATTTCATACG TERM 5204 4153859 - 4153849 - g 70 -4.6 -4.46581 | opp_overlap 4153849, overlap 4153851 TAAAATGGCAGAAAA CCCG CAG CAGG TGCTGGATTTCTTAA TERM 5205 4154938 - 4154916 - g 74 -10.6 -3.21276 | opp_overlap 4154904, overlap 4154914 CGTTCCTCGACAACA TTCTGAGCCG TGG CGGTTCAGAA GAGCCGATGGATCTG prlC 4152980 - 4155022 + | oligopeptidase A TERM 5206 4155076 - 4155055 - g 88 -11.5 -3.794 | opp_overlap 4155057, overlap 4155057 GCTTAATTGATGAAA CAGGCGCCG GAGA CGGCGCCTT ATCTGTTCTGGCGGC TERM 5207 4155074 - 4155057 - g 95 -14.1 -3.48105 | opp_overlap 4155057, overlap 4155055 TTAATTGATGAAACA GGCGCCG GAGA CGGCGCC TTATCTGTTCTGGCG TERM 5208 4155057 - 4155074 + G 100 -14.1 -3.72788 | opp_overlap 4155057 4155055 TTAATTGATGAAACA GGCGCCG GAGA CGGCGCC TTATCTGTTCTGGCG TERM 5209 4155171 - 4155194 + G 70 -4.6 -4.49531 | gap 1 GAATTGCGCAAGCGT GATG-AGCCAA AAC TTGGCGGCATC TTTGTTGATTTTGTT yhiQ 4155030 - 4155782 + | putative methyltransferase TERM 5210 4155815 - 4155790 - T 100 -19.1 -4.20806 | opp_overlap 4155790 CAGTGTAAAAGTAAA GCAGGGTAGCG ATAA CGCTACCCTGC TTTCTGCAAGAATAA TERM 5211 4155790 - 4155815 + T 100 -19.1 -3.86346 | opp_overlap 4155790 CAGTGTAAAAGTAAA GCAGGGTAGCG ATAA CGCTACCCTGC TTTCTGCAAGAATAA TERM 5212 4157591 - 4157574 - T 100 -14.1 -4.77757 | CGCCAAAAAGCAAAA CGCCCGC ATAT GCGGGCG TTCAGGAACACGTCG uspA 4158052 - 4157618 - | universal stress protein yhiO 4158446 - 4158781 + | universal stress protein UspB TERM 5213 4158812 - 4158833 + T 77 -11.5 -3.14218 | opp_overlap 4158812, overlap 4158810 4158809 TAACGTATAAAAAAA GCGGGCCAG TAAA CTGACCCGC TCGTTTTGGTGCGTA TERM 5214 4158833 - 4158812 - T 100 -13.7 -5.66684 | opp_overlap 4158810 4158809 4158812 TAACGTATAAAAAAA GCGGGCCAG TAAA CTGACCCGC TCGTTTTGGTGCGTA pitA 4160351 - 4158852 - | low-affinity phosphate transport protein TERM 5215 4159732 - 4159751 + g 70 -4.2 -4.65933 | overlap 4159728 ATACGCGTCCAGAAC GGCGGC TTTTTCTT GCCGTC TTTCTTTTCACGCTC yhiN 4160583 - 4161782 + | hypothetical protein TERM 5216 4162087 - 4162107 + F 100 -15.5 -5.7946 | TTGTTTTTACATTTT CACCACCTG TAT CAGGTGGTG TTTTTTTATTGGCGG S4246 4162311 - 4162586 + | IS1 orfA S4247 4162505 - 4163008 + | IS1 orfB S4248 4163318 - 4163019 - | IS600 orfA TERM 5217 4163558 - 4163548 - H 76 -8.2 -4.0371 | opp_overlap 4163548 4163547 TAGTCCTTACACAAA GCCG TGT CGGC CTTCTTGGTTTATTT TERM 5218 4163928 - 4163942 + G 70 -5.6 -4.30001 | overlap 4163925 TTCGTAACGGCTGAA GGTGGC ATC GTCGCC TTGTTTGGTTTTTTG TERM 5219 4164565 - 4164555 - g 79 -2.4 -5.22104 | GAAAAAATAAGAAAA CGCG CAG CTCG GGTATTTGTAAATGA S4249 4163583 - 4164608 + | hypothetical protein TERM 5220 4165747 - 4165778 + F 100 -13.9 -4.00066 | GCGTTGTAGGTTGGT TCCGCGTTCATTA CCTTGT TAGTGAACGCGGA TTTATCAGTTGTCGA TERM 5221 4165932 - 4165913 - f 76 -9.4 -3.70331 | opp_overlap 4165912, overlap 4165911 AAGTGACTCAAAACA CTTCAGTT TTTA AACTGAAG CTTAGTGCAACGCGA S4250 4166011 - 4166571 + | chaperone S4254 4166615 - 4167694 + | fimbrial protein remnant S4252 4168854 - 4167949 - | insertion element IS2 transposase InsD S4253 4169177 - 4168812 - | insertion sequence 2 OrfA protein TERM 5222 4170412 - 4170440 + H 72 -2.7 -4.96501 | gap 1, overlap 4170422 ATAGCGGCGACATGT TTAT-AGTTTCT AAATTA AGAAACTCATAA TTTATTTTTGTGAAG TERM 5223 4170422 - 4170444 + H 76 -5 -4.84761 | overlap 4170412 CATGTTTATAGTTTC TAAATTAAGA AAC TCATAATTTA TTTTTGTGAAGATGT TERM 5224 4170527 - 4170515 - H 84 -7.7 -4.7923 | ATGCAAAGAAAGAAA CTGCA TTT TGCAG TGTAAATGAAAATCA TERM 5225 4170582 - 4170596 + G 72 -5.6 -4.48987 | opp_overlap 4170581 ATTGTTAGCAATCAT GCTGGC GGG GACAGC TTTTGCTTCTCAGGC S4255 4170556 - 4171068 + | hypothetical protein TERM 5226 4171092 - 4171112 + T 100 -12.6 -5.1925 | ATTAGTTAATTTCAT GGCGGGAT TTGAT ATCCCGCC TTTTTTAACTTATAA S4836 4171936 - 4171175 - | hypothetical protein TERM 5227 4171519 - 4171539 + g 70 -4 -4.6008 | overlap 4171516 4171520 AGTGATGCCCAGTAA TGATGACG ATAGG TGTCATCG TTTTCATTATATTTT S4837 4172182 - 4172946 + | hypothetical protein S4838 4172900 - 4173415 + | hypothetical protein TERM 5228 4173488 - 4173462 - f 91 -8.1 -5.03145 | opp_overlap 4173461 TAAGTTCGTAAAAAA CCAGCGTTA AGATATGAA TAACGCTGG GATTATGTAAATTTT TERM 5229 4175733 - 4175709 - f 91 -8.1 -5.08178 | opp_overlap 4175712 ATACATACATAAAAA TAATAAATTGC TCT ACAATTTATTA AATACGAGAGACATG TERM 5230 4178295 - 4178283 - g 71 -9.1 -3.52918 | overlap 4178279 TAATTGCCAAATTAA CCCTG GTG CAGGG CCAGAGATAACCACT yhiJ 4176769 - 4178391 + | hypothetical protein TERM 5231 4178708 - 4178688 - f 74 -11.1 -2.80344 | opp_overlap 4178687 4178686, overlap 4178687 CCCGGATGGAAGAAT CCGCTGAAC GTC GTTCGGCGG CAGTTGTAACACGCG TERM 5232 4179753 - 4179742 - g 72 -7.2 -4.1964 | TGGAATATGTCAAAA CCGG TTTA CCGG GCGTAGCGTGGGTGC yhiI 4178757 - 4179824 + | hypothetical protein TERM 5233 4181044 - 4181066 + G 85 -11.3 -3.65351 | gap 1, overlap 4181045 4181049 TCTGCCGGAGTCATT GCCGCTCGGC ATTC GCC-AGCGGC TTTCGCTGGCGGTGG yhiH 4179821 - 4182556 + | putative ATP-binding component of a transport system TERM 5234 4183336 - 4183352 + G 70 -10.1 -3.24232 | overlap 4183335 4183332 ATCCCGCTGTTTATG CTGGGCG TGG CGCTCAG TCTGTTTGCCACCAC yhhJ 4182556 - 4183680 + | putative transporter S4263 4184011 - 4184370 + | hypothetical protein TERM 5235 4184420 - 4184463 + T 76 -4.2 -5.03713 | gap 1, opp_overlap 4184427 4184432, overlap 4184420 4184427 TTTACAGGATCTATC TATG-CAACTGAACTTAATTT TAT AAATTAAGTTCAGTTAATATC TTTTCTTTCCTTGTT TERM 5236 4184420 - 4184461 + T 83 -9.9 -4.11369 | gap 1, opp_overlap 4184427 4184432, overlap 4184420 4184427 TTTACAGGATCTATC TATGCAACTGAACTTAATTT TAT AAATTAAGTTCAGTTA-ATA TCTTTTCTTTCCTTG TERM 5237 4184455 - 4184427 - T 88 -14.9 -3.08133 | opp_overlap 4184420 4184420 4184427, overlap 4184432 GATCTATCTATGCAA CTGAACTTAATTT TAT AAATTAAGTTCAG TTAATATCTTTTCTT TERM 5238 4184427 - 4184455 + T 95 -14.9 -3.48814 | opp_overlap 4184427 4184432, overlap 4184420 4184420 GATCTATCTATGCAA CTGAACTTAATTT TAT AAATTAAGTTCAG TTAATATCTTTTCTT yhhG 4184891 - 4184490 - | nickel responsive regulator nikE 4185703 - 4184897 - | nickel transporter ATP-binding protein nikD 4186464 - 4185700 - | nickel transporter ATP-binding protein nikC 4187297 - 4186464 - | nickel transporter permease NikC nikB 4188238 - 4187294 - | nickel transporter permease NikB TERM 5239 4188192 - 4188172 - G 90 -7.5 -4.93296 | overlap 4188175 GCAGCATCAGAAAAA TGATCACCG AGG CGGCGAGCA CCATCGGGATCAGCA nikA 4189812 - 4188238 - | periplasmic binding protein for nickel yhhU 4190510 - 4189923 - | holo-(acyl carrier protein) synthase 2 TERM 5240 4190285 - 4190317 + g 82 -11.3 -3.53224 | opp_overlap 4190275 4190312, overlap 4190275 GCAGAGCGATATCGT CACCGCTATGGCTTA AGT TGAACCATAGCGGCG TTTCCGGCGCGAATG yhhT 4191614 - 4190565 - | hypothetical protein TERM 5241 4191202 - 4191218 + g 75 -5.1 -4.60041 | CCGGTCATTAGCGCT GTGGTGA AGG TAACCAC TTTTTCCGAGTCCAT TERM 5242 4192951 - 4192924 - g 100 -13.4 -5.52384 | opp_overlap 4192944 TGGCGATTAAAAAAA CGGCCTCCGGAA CACG TCCCTGAGGCCG CCTCATCATCTTAAA yhhS 4191748 - 4192965 + | hypothetical protein S4273 4193526 - 4192969 - | hypothetical protein yhhQ 4194264 - 4193599 - | hypothetical protein TERM 5243 4193812 - 4193794 - G 95 -6.6 -5.1963 | overlap 4193795 GGCAATGAAGAAAAA GGCCAGCG TGT CGCTGACG TTACCGAACAGTGTG TERM 5244 4193811 - 4193795 - G 77 -10.1 -3.70694 | overlap 4193794 GCAATGAAGAAAAAG GCCAGCG TGT CGCTGAC GTTACCGAACAGTGT TERM 5245 4194630 - 4194646 + G 70 -4.3 -4.52803 | ACGATCCGGCCACTA CCCGCGA TAT TCCTGGG TTTTGTACCTTTATG yhhP 4194485 - 4194730 + | cell developmental protein SirA TERM 5246 4194800 - 4194825 + T 74 -8.3 -3.83724 | AGAGGGGCGAGGGGA CCGATCGCG CTCAATGT TGCGATCGG TTTGCCTTATCTCCT zntA 4197030 - 4194832 - | zinc/cadmium/mercury/lead-transporting ATPase TERM 5247 4196297 - 4196318 + g 83 -10.1 -4.13654 | ACCTCTTCCCGCTCA CCGTTACGC AGGC GCGTGGCGG TTTCTGGTTTCAGCG TERM 5248 4197093 - 4197074 - R 80 -12.2 -3.01984 | opp_overlap 4197070 4197069 TAACCGAAGGATACA CTCTGGAG TCGA CTCCAGAG TCAAGTTTTATCAGA yhhN 4197730 - 4197104 - | putative enzyme TERM 5249 4197499 - 4197485 - G 71 -3.4 -4.8048 | overlap 4197486 4197487 GTGCGAGAGGAAAAA CGCGCC GAT GGCGTA CATCAGACGTTGACG yhhM 4197871 - 4198230 + | putative receptor TERM 5250 4198209 - 4198235 + T 75 -3.1 -5.22039 | overlap 4198228 AGGAACGCGCTTTGT TAGCTTTGTTG GCGAA CAATAAGGTTA TTTTTTAACTTTAAA yhhL 4198502 - 4198233 - | hypothetical protein TERM 5251 4198311 - 4198280 - G 80 -11.7 -3.39018 | opp_overlap 4198277, overlap 4198278 CCAGCAGTTCAAACA CGCCGAAAAGG AAAATCCGCA CCTTTTCGGCG GTGGTCATCTGCGGG yhhF 4199088 - 4198492 - | 16S rRNA m(2)G966-methyltransferase TERM 5252 4199066 - 4199079 + g 87 -4.5 -5.1861 | CGGATTTGGCCGCTG CCGGA ATGA TTCGG TTTTTTCATGATAAA ftsY 4199238 - 4200734 + | cell division protein FtsY ftsE 4200737 - 4201405 + | cell division protein FtsE TERM 5253 4201772 - 4201750 - g 77 -3.3 -5.03314 | gap 1 TTTACTTGCAAAAAA CGCTG-GACG ATGA CGCCGCTGCG GGCGTGGTGGCACAG ftsX 4201398 - 4202456 + | cell division protein FtsX rpoH 4202701 - 4203555 + | RNA polymerase factor sigma-32 TERM 5254 4203577 - 4203596 + F 100 -7.8 -5.75538 | opp_overlap 4203577 CTATTAAGCAGAGAA CCCTGGAT GAGA GTCCGGGG TTTTTGTTTTTTGGG TERM 5255 4204098 - 4204087 - g 70 -5.8 -4.15044 | GCGGTGGCGAACAAA GTCG TTAA CGAC GGCATTAAATATGTG livJ 4203769 - 4204929 + | high-affinity amino acid transport protein, periplasmic binding protein yhhK 4205511 - 4205128 - | hypothetical protein TERM 5256 4205567 - 4205577 + H 95 -3.2 -5.88476 | GAAATAATTTAATCG GAGG CTT TCTC TTTTTTATTTCTTTT livK 4205935 - 4207044 + | high-affinity leucine-specific transport protein, periplasmic binding protein TERM 5257 4207052 - 4207074 + F 82 -11.2 -3.55622 | overlap 4207053 CCAAGTGATCATCCC ACCGCCCGTA AAA TGCGGGCGGG TTTAGAAAGGTTACC TERM 5258 4207053 - 4207073 + F 86 -14.7 -2.73159 | overlap 4207052 CAAGTGATCATCCCA CCGCCCGTA AAA TGCGGGCGG GTTTAGAAAGGTTAC TERM 5259 4207211 - 4207227 + G 83 -10.1 -4.1347 | opp_overlap 4207211 TATCGGCATGATCAA CTTCGCC CAC GGCGAGG TTTATATGATTGGCA livH 4207092 - 4208018 + | branched-chain amino acid transporter permease subunit LivH livM 4208015 - 4209292 + | leucine/isoleucine/valine transporter permease subunit livG 4209289 - 4210056 + | leucine/isoleucine/valine transporter ATP-binding subunit TERM 5260 4210509 - 4210527 + G 70 -4.5 -4.51994 | TGGCGATTGGTCGCG CGCTGAT GAGCA ATCCGCG TTTGTTGTTACTTGA livF 4210058 - 4210771 + | leucine/isoleucine/valine transporter ATP-binding subunit TERM 5261 4210790 - 4210805 + F 72 -9 -3.53811 | opp_overlap 4210790 4210793 4210800 CACGTTGATTGATAA GGAGTC AAAA GACTCC TTTGAGACAGGTGAC TERM 5262 4210805 - 4210790 - f 70 -9 -3.35996 | opp_overlap 4210790, overlap 4210793 4210800 CACGTTGATTGATAA GGAGTC AAAA GACTCC TTTGAGACAGGTGAC TERM 5263 4211140 - 4211127 - f 70 -5.2 -4.46212 | opp_overlap 4211114 4211127, overlap 4211128 CCCGCGAGCATAAAA CGCG TGAATT CGCG CATTCGGTACAACAA TERM 5264 4212086 - 4212073 - g 72 -5.9 -4.38154 | overlap 4212062 AGATGCGCCACAAAA CGCCA TTAT CGGCG GAGCCAGCCTGTGGG ugpB 4211168 - 4212484 + | glycerol-3-phosphate transporter periplasmic binding protein ugpA 4212582 - 4213469 + | glycerol-3-phosphate transporter permease ugpE 4213466 - 4214311 + | glycerol-3-phosphate transporter membrane protein TERM 5265 4215982 - 4215951 - g 78 -8.6 -4.17556 | gap 1, opp_overlap 4215949 TATACCGTCAATAAA CCCCAGCAC-GCGGC AGA GTTGCTGCGCTGGGG CGTGGATTGCATCTG ugpQ 4215300 - 4216043 + | cytoplasmic glycerophosphodiester phosphodiesterase yhhA 4216470 - 4216030 - | hypothetical protein TERM 5266 4216063 - 4216096 + g 81 -9.5 -4.0162 | CAACGGAATGTCAGG CTGCGGCGTGCTGGG CTGA TTCAGCATGTCGCCG TTTCTCCTCTCCGGC TERM 5267 4216448 - 4216435 - G 72 -8.1 -3.95219 | overlap 4216426 TGCAAAGCCGACAAA CGGCA GGAG TGCCG TAAGAATCAGAAGTC TERM 5268 4216616 - 4216599 - g 90 -9.1 -4.51699 | opp_overlap 4216615 ATAACGATGATAAAA CCGACGT TTTT ACGCCGG GTGGCCATTGCTGCT TERM 5269 4217084 - 4217072 - g 71 -9.1 -3.51934 | overlap 4217070 GGCGCTGGATAAATA CGGCA CCA TGCCG CTGAACAAAGTCGTG TERM 5270 4217742 - 4217703 - g 82 -3.4 -5.22312 | gap 1 ATTGATATCAAAAAA GCG-AAGCCGTCCAGTGAG ATT CGCCCTGGCAAGCTTGCGC CTTATGAGAGTAATC ggt 4216590 - 4218332 + | gamma-glutamyltranspeptidase periplasmic precursor yhhY 4218879 - 4218391 - | putative acetyltransferase YhhY TERM 5271 4219070 - 4219086 + H 100 -9.4 -6.21477 | TTCCAGTATTACTTA GCCAGC CGGGT GCTGGC TTTTTTTTTGATCTT yhhX 4219212 - 4220249 + | putative dehydrogenase yhhW 4220372 - 4221067 + | hypothetical protein TERM 5272 4221117 - 4221148 + F 100 -13.6 -4.10429 | overlap 4221144 AGGCTTCCTCGCTCG CTCCGGTCGCGTGC TGAT GCACGCTTCCGGGG TTTTGCCGCGTCGTT TERM 5273 4221562 - 4221550 - g 76 -9.1 -3.75629 | opp_overlap 4221545 TACGCGGAATCGAAA GCGTC ACC GACGC GCACGGTTATCAGAC gntR 4221348 - 4222286 + | regulator of gluconate (gnt) operon TERM 5274 4222367 - 4222393 + F 72 -3 -5.01845 | opp_overlap 4222367 TGTCCGGCTGGACAA TGTTGCCGATAA CAG TTACCCGTAACA TTTTTAATTCTTGTA gntK 4222425 - 4222952 + | gluconate kinase 1 TERM 5275 4222981 - 4223009 + F 71 -3.9 -4.77036 | overlap 4222981 4222980 TAACGCTTGTTTTAA CAGCAGTAG GGTCTGTTTTA CTGCTGCTG TTTTTAGTCATGAAG gntU 4223019 - 4224296 + | low affinity gluconate transporter TERM 5276 4224305 - 4224330 + T 88 -12.6 -3.63922 | overlap 4224303 GAGTTAAGTTTGTTC GCCCGGTAGT TGTGAC GCTACCGGGC TCTTTTCGAAAAACT yhgN 4224946 - 4224353 - | dITP- and XTP- hydrolyzing protein asd 4225138 - 4226241 + | aspartate-semialdehyde dehydrogenase TERM 5277 4226260 - 4226277 + F 71 -9.8 -3.15996 | opp_overlap 4226258 4226257, overlap 4226258 TTATTCATTAAATCT GGGGCG CGATGC CGCCCC TGTTAGTGCGTAATA TERM 5278 4227237 - 4227219 - g 91 -7.4 -5.09173 | GAAGAGCGCAAAAAA GCGAATCA GTT TGATGCGC CAATCTCTATTTATG TERM 5279 4228123 - 4228113 - g 83 -5.4 -5.0538 | GTCCACGGTAAAAAA TCGA TTC TCGA CCGCATGCCGGGCGA glgB 4226514 - 4228700 + | glycogen branching enzyme TERM 5280 4229064 - 4229093 + G 70 -10 -3.2056 | opp_overlap 4229062 ACTATCGCGACAACG CCGCCATTGCGC CGAAAT GCGTAGTGGTGG TTGATCACTATGACT glgX 4228697 - 4230670 + | glycogen debranching enzyme TERM 5281 4231179 - 4231165 - g 84 -7.8 -4.60487 | opp_overlap 4231165 4231164 GATCACGTCGAAAAA GGCGCA CGT TGCACC GTTGCTTGTATGCCA glgC 4230688 - 4231983 + | glucose-1-phosphate adenylyltransferase TERM 5282 4232749 - 4232737 - g 82 -7.7 -4.46212 | opp_overlap 4232743 GCGTGGACGAGAAAA TCTGG AGT CCAGA GACGGACTTACTGTT glgA 4231983 - 4233416 + | glycogen synthase TERM 5283 4233817 - 4233785 - g 88 -8.9 -4.72497 | overlap 4233786 4233788 GATTGATGAAGAAAA TGACCCAGGCCTCGG TAA CGGTGGCCTGGGACG TCTGGCGGCTTGCTT TERM 5284 4233816 - 4233786 - g 86 -12.4 -3.42775 | overlap 4233785 4233788 ATTGATGAAGAAAAT GACCCAGGCCTCGG TAA CGGTGGCCTGGGAC GTCTGGCGGCTTGCT TERM 5285 4233814 - 4233788 - g 95 -13.6 -3.27725 | overlap 4233786 4233785 TGATGAAGAAAATGA CCCAGGCCTCGG TAA CGGTGGCCTGGG ACGTCTGGCGGCTTG TERM 5286 4235643 - 4235664 + G 72 -10.1 -3.38316 | opp_overlap 4235642 TTCAGTCCGGAAGAT CCGGGTCGC TATC GCGATCTGG TTGATTCGCTGATCA glgP 4233435 - 4235882 + | glycogen phosphorylase TERM 5287 4235967 - 4235992 + F 100 -9.8 -5.61596 | opp_overlap 4235967 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 5288 4235992 - 4235967 - f 72 -9.1 -3.61398 | opp_overlap 4235967 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT S4313 4236000 - 4236866 + | IS4 orf S4314 4236872 - 4237327 + | IS4 orf TERM 5289 4237338 - 4237309 - T 89 -9.3 -4.59109 | overlap 4237311 4237332 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TAGGCCAAAGGGTCC TERM 5290 4237336 - 4237311 - T 100 -16.3 -3.90762 | overlap 4237309 4237332 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAGGCCAAAGGGT glpD 4239412 - 4237934 - | glycerol-3-phosphate dehydrogenase TERM 5291 4239490 - 4239475 - H 71 -7.6 -3.95219 | opp_overlap 4239475 GTTAAAGCTCATAAA TGTTCG TTAT CGAACA TATTAGCAAAGAATC glpE 4239630 - 4239956 + | thiosulfate sulfurtransferase TERM 5292 4240027 - 4240045 + G 72 -5.8 -4.33621 | overlap 4240023 4240029 TACCTCTTTTGCTAA CCCCCGCG TGG CGCAGGCG TTTGTTGATTACATG TERM 5293 4240141 - 4240161 + G 75 -6.7 -4.36914 | overlap 4240147 4240148 GTCCCAGGCCGAGCG CGTGCGGGC GGA GCTGGCGCG TTTTCTCGAAAACCC TERM 5294 4240147 - 4240188 + G 74 -10.1 -3.48276 | opp_overlap 4240174 4240175, overlap 4240141 4240148 GGCCGAGCGCGTGCG GGCGGAGCTGGCGCGTTTT CTCG AAAACCCGGCAGATCCGCG TTATCTGGCGGCCAG TERM 5295 4240148 - 4240187 + G 84 -13.6 -2.68823 | opp_overlap 4240174 4240175, overlap 4240141 4240147 GCCGAGCGCGTGCGG GCGGAGCTGGCGCGTTTT CTCG AAAACCCGGCAGATCCGC GTTATCTGGCGGCCA glpG 4240007 - 4240831 + | intramembrane serine protease GlpG TERM 5296 4241094 - 4241082 - g 90 -6.9 -5.12068 | CAGACCGAAGAAAAA GAGCG CAT CGCCC GCAAAGTGGCGGAGC glpR 4240848 - 4241606 + | DNA-binding transcriptional repressor GlpR rtcR 4243186 - 4241588 - | putative 2-component regulator TERM 5297 4241722 - 4241707 - G 79 -4.6 -4.93696 | GCGAAACATCAAAAA GCTGTC GTCC GGCAGC AGAAAGCGACTTTGC TERM 5298 4242735 - 4242751 + g 71 -2.1 -5.00884 | overlap 4242738 ATCGTCACTTCACCT GGGCCGC GCG GCTGTTC TTTTTTGCGCGGAGT TERM 5299 4243464 - 4243477 + G 77 -5.9 -4.65263 | opp_overlap 4243464 4243462 AGCAACTTATTAATA CGGCG AAGA TGCCG TTTATTTTCAAACAT rtcB 4243367 - 4244593 + | hypothetical protein TERM 5300 4244955 - 4244994 + F 72 -6.3 -4.37092 | gap 1, opp_overlap 4244958 4244974 4244975, overlap 4244957 4244975 CTTCGCGTGTTGAAG TGAGC-GGCGGCACCGAT AACCC GTCGGCGCCGCCTGCGGA TTTTATCCGCCGGGT TERM 5301 4244991 - 4244958 - f 83 -13.9 -2.52464 | gap 1, opp_overlap 4244957 4244955 4244975, overlap 4244974 4244975 CGCGTGTTGAAGTGA GC-GGCGGCACCGA TAACCCG TCGGCGCCGCCTGC GGATTTTATCCGCCG yhgJ 4245008 - 4245613 + | RNA 3'-terminal-phosphate cyclase TERM 5302 4246023 - 4246041 + F 73 -11 -2.55074 | opp_overlap 4246021, overlap 4246012 TTAAGTTGAATCAGC TGGCGCAG TTG TTGCGCCA TCGCTTCGCCTTCGA TERM 5303 4248052 - 4248064 + F 78 -5.5 -4.75372 | overlap 4248053 AGAGTGACGTCAGGC TGGCA TAT TGCCG TTTTTGCTCCATCGT TERM 5304 4248550 - 4248533 - f 72 -6.3 -4.21676 | gap 1, overlap 4248534 4248536 ACAACTCACCTAAAA CGACGCTG ATC CAGCGT-G AATACTGGTTTCCCT TERM 5305 4249789 - 4249773 - g 72 -5.1 -4.57073 | TACTGCCGGTAAAAA GCTGC GCCTGAT GCAGC AATACTTCCAGTGTG TERM 5306 4250367 - 4250350 - g 79 -9.9 -3.72576 | CGTCGCTGGATCAAA CAGTGCA ACCC TGCACTG GCGGCTCTGTTGGAT TERM 5307 4250456 - 4250440 - g 70 -3.7 -4.62872 | ATCAATCTGGAAAAA TTCGC TGATGAT GCGAA ATTCCGTCAGCAATA malP 4248973 - 4251366 + | maltodextrin phosphorylase TERM 5308 4251531 - 4251505 - g 85 -13.1 -3.18582 | gap 1, overlap 4251479 4251478 4251520 4251521 GACGCGATGCATCAA CG-TACCGCCAC GAAA GTGGCGGTAACG CCAGTCCCGAATGTC TERM 5309 4252243 - 4252266 + G 72 -8.8 -3.74872 | overlap 4252237 GTTGCAGAGCAGGGC GACAGCCTGT TCTG GCAGGCTGCC TTTGATGCGCTACAT TERM 5310 4252423 - 4252437 + G 74 -10 -3.56092 | overlap 4252420 CTCTGGTTGCAGTGG CTGGCT TAC AGCCAG TTTGCCGCCTGCTGG TERM 5311 4253361 - 4253349 - g 74 -3.3 -4.93296 | opp_overlap 4253349 4253350 4253352 4253353, overlap 4253351 TTACCAGTATAAAAA CTGGC GAC GCAAG CTTTCCGCAACGCTT malQ 4251376 - 4253460 + | 4-alpha-glucanotransferase TERM 5312 4253468 - 4253499 + T 77 -11 -3.23393 | gap 1, overlap 4253466 4253469 AGAAGTAGAGTGCGG TTGA-TGTCGGATGC GAT GCATCCGGCAGTCAG TGTTATCAAATCACC TERM 5313 4253469 - 4253498 + T 78 -12.3 -2.53822 | gap 1, overlap 4253468 4253466 GAAGTAGAGTGCGGT TGA-TGTCGGATGC GAT GCATCCGGCAGTCA GTGTTATCAAATCAC gntT 4254821 - 4253505 - | high-affinity transport permease for gluconate yhgI 4255757 - 4255182 - | putative DNA uptake protein yhgH 4256499 - 4255816 - | gluconate periplasmic binding protein TERM 5314 4256676 - 4256701 + G 72 -8.9 -3.75665 | TGCACCTTGTTGACC TGCCCGGCTTC GGGC GTAGCCGGGGA TTTGGTGCGCTGTCA TERM 5315 4257234 - 4257247 + G 70 -5.2 -4.44046 | opp_overlap 4257234 ATATCTTCGCCAAAG CGGC CCATGC GCCG TTTATTTCGCATCCG bioH 4256537 - 4257325 + | carboxylesterase BioH S4331 4258956 - 4258051 - | insertion element IS2 transposase InsD S4332 4259279 - 4258914 - | insertion sequence 2 OrfA protein yhgA 4260242 - 4259355 - | hypothetical protein TERM 5316 4260215 - 4260231 + g 71 -2.9 -4.77036 | overlap 4260218 TGAACAGCGCATCAT GTGGGGT GGA ACTCTGC TTTTTACTCATGGCG TERM 5317 4260354 - 4260366 + r 80 -6.3 -4.82901 | GAACTTACGTTGCGC TGCAA GAA TTGCA TTTTTATGGAAAGCC TERM 5318 4260418 - 4260394 - R 100 -12.2 -5.08824 | gap 1, opp_overlap 4260394 GCCGCACGCAAAAAA GCCCGG-ATGC AAAC GCATACCGGGC TTTTCAAAACAGGCG TERM 5319 4260394 - 4260418 + r 95 -12.2 -4.07568 | gap 1, opp_overlap 4260394 GCCGCACGCAAAAAA GCCCGG-ATGC AAAC GCATACCGGGC TTTTCAAAACAGGCG yhgG 4260681 - 4260445 - | hypothetical protein feoB 4263002 - 4260681 - | ferrous iron transport protein B TERM 5320 4261372 - 4261390 + g 77 -8.2 -4.11216 | overlap 4261362 GAAGCCAGCGCCGAG TCGTTGAT GTT ATCGACGA TTTTCCCGCTCAACG TERM 5321 4262155 - 4262144 - G 74 -5.8 -4.53036 | TCACAAAGAGGAAAA TCGG CAGA CCGA GGAAACGGTTGAGCA feoA 4263246 - 4263019 - | ferrous iron transport protein A TERM 5322 4263604 - 4263582 - R 100 -17.8 -4.63218 | opp_overlap 4263582 GGCTGTGGAATAAAA GTGCCGGAGA TAT TCTCCGGCAC TTTTATGTCAGGCAA TERM 5323 4263582 - 4263604 + r 100 -17.8 -4.52589 | opp_overlap 4263582 GGCTGTGGAATAAAA GTGCCGGAGA TAT TCTCCGGCAC TTTTATGTCAGGCAA yhgF 4265906 - 4263684 - | hypothetical protein TERM 5324 4264112 - 4264133 + g 84 -7.9 -4.62904 | gap 1, opp_overlap 4264111 4264110, overlap 4264112 GAGCGGTTTTAAATT CC-GGACGCG GAT CGCGACCCGG TTTTTCCAGCTCTTT TERM 5325 4264474 - 4264486 + g 74 -10.5 -3.14132 | ATCATGCGCGTCAGG CCCGC CAC GCGGG TTAATAGCGGAACAG greB 4266578 - 4266102 - | transcription elongation factor GreB TERM 5326 4267286 - 4267300 + G 77 -10 -3.62096 | opp_overlap 4267273 4267276, overlap 4267283 GATGAGCCGATGCCG CTCACC AGC GGTGAG TTTGCGGTACTGAAG ompR 4266806 - 4267525 + | osmolarity response regulator TERM 5327 4267577 - 4267609 + G 73 -12 -2.73443 | overlap 4267576 GTACGTTATTGCTCA TCGTCACCTTGCTG TTCGC CAGCCTGGTGACGA CTTATCTGGTGGTGC envZ 4267522 - 4268874 + | osmolarity sensor protein TERM 5328 4268880 - 4268901 + T 100 -13.7 -4.65153 | opp_overlap 4268880 AGAAGGGTAAATAAA CGGGAGGCG AAGG TGCCTCCCG TTTTGCTTTCTATAA TERM 5329 4268901 - 4268880 - T 100 -13 -4.46835 | opp_overlap 4268880 AGAAGGGTAAATAAA CGGGAGGC GAAGGT GCCTCCCG TTTTGCTTTCTATAA pckA 4270572 - 4268950 - | phosphoenolpyruvate carboxykinase TERM 5330 4268979 - 4268998 + g 73 -11.4 -2.59797 | overlap 4268978 4268977 CAGCCGCTACCAGCG CGGCACCC GCAG GGGTGTCG GTGTATTTATCGAAG TERM 5331 4270239 - 4270253 + g 73 -11.4 -2.77043 | opp_overlap 4270237, overlap 4270238 GTTTGCCGGAAAGCT GCCTGG TCA CCAGGC CTTTCAGATGCTGCC TERM 5332 4270709 - 4270688 - H 75 -3 -5.26918 | overlap 4270689 ATATTTGACAAAAAA CTCCGTGA TTCCTG TCACGAAA CGGTTGCTATTATCG TERM 5333 4271112 - 4271124 + G 70 -5.5 -4.34771 | overlap 4271113 TGTTTATGGCGTGCC TGCGA CCG TCGCG TTTTCATCCGTTTTA yhgE 4270951 - 4272702 + | putative transport protein TERM 5334 4272828 - 4272805 - T 100 -16.8 -4.15106 | opp_overlap 4272799 4272807 CATTAAGTCGTAAAA TCCGGCAGAG CCCT CTCTGCCGGA CATACTCATTAATGA hslO 4273715 - 4272846 - | Hsp33-like chaperonin TERM 5335 4273388 - 4273413 + g 93 -10.4 -4.44974 | opp_overlap 4273387 TCACCACGTAACCAT TGCCGACCAG CGTTTT CAGGTCGGCA TTTTCTGGAATTTCG yrfH 4274141 - 4273740 - | ribosome-associated heat shock protein Hsp15 TERM 5336 4274096 - 4274086 - G 75 -4.6 -4.82901 | CGGGTTTTATAAAAA CGGG CAG CCCA TAGCCATTTATCCAG yrfG 4274865 - 4274152 - | putative phosphatase TERM 5337 4274843 - 4274884 + g 73 -9.5 -3.67775 | gap 1, opp_overlap 4274846, overlap 4274845 ATCTCCAGAGTGAAG CA-ATTTGCGCGACAGGGTA GCA TAACCTGCCGCGCAAACGTG TTATTCGATAAGGCT TERM 5338 4274845 - 4274881 + g 76 -12.3 -2.64872 | opp_overlap 4274846, overlap 4274843 CTCCAGAGTGAAGCA ATTTGCGCGACAGGGTA GCA TAACCTGCCGCGCAAAC GTGTTATTCGATAAG TERM 5339 4274880 - 4274846 - G 100 -18 -3.39142 | opp_overlap 4274845 4274843 TCCAGAGTGAAGCAA TTTGCGCGACAGGGTA GCA TAACCTGCCGCGCAAA CGTGTTATTCGATAA yrfF 4277020 - 4274885 - | putative dehydrogenase TERM 5340 4276018 - 4275968 - G 74 -7.6 -4.10178 | gap 1 GAATAACAGCATAAA CAGCACTAGCAGCG-AGCCCG CAGCGATAAT CGTACTGCGCAGCCAGTGCTG TAACGGAAAGTTTTT nudE 4277340 - 4277900 + | ADP-ribose diphosphatase NudE TERM 5341 4278044 - 4278057 + T 93 -9.5 -4.72272 | opp_overlap 4278021 4278044 TCAGCCAACTGAAAA GGCGC CGAA GCGCC TTTTTAATCAGAACA TERM 5342 4278057 - 4278044 - T 87 -9.5 -4.28774 | opp_overlap 4278044, overlap 4278021 TCAGCCAACTGAAAA GGCGC CGAA GCGCC TTTTTAATCAGAACA mrcA 4280641 - 4278065 - | peptidoglycan synthetase TERM 5343 4280717 - 4280701 - H 79 -12.3 -2.92091 | AGACGCATTGATATA CCCGTCA GAG TGACGGG TGATAAGGAGATCAT yrfD 4280710 - 4281516 + | hypothetical protein yrfC 4281516 - 4282055 + | hypothetical protein yrfB 4282039 - 4282479 + | hypothetical protein TERM 5344 4283284 - 4283237 - g 72 -7.8 -3.87075 | gap 1 ATGACCGTCGATAAA CGCACCAATCGCC-TTTTGCTAC GAG ATAACAAAACGGCGTTAAGCGCG CTTGAACAGTGGGTA TERM 5345 4283859 - 4283873 + G 75 -5.6 -4.59773 | AAAGCGGAGAAACGT TGGCGC TGG GCGGCA TTTTTACCCGTAAAA hofQ 4282787 - 4284025 + | outer membrane porin HofQ TERM 5346 4284167 - 4284183 + F 83 -6.5 -5.06451 | ATGATTTATCATTCA GGCGGCA TTT TGCTGTC TTTTTTACGCTAATC TERM 5347 4284362 - 4284388 + F 83 -10 -4.05446 | GGTTTCAGTTCATGT CCTGCGGCGCTC TCT GAGCGAAGCGGG TTTATCATTAACGAA TERM 5348 4284638 - 4284620 - g 72 -4.5 -4.64676 | CGATCGCGAAGAAAA GGTCATC AATGA GTTGACC GAGAAACAGGGTATT aroK 4284426 - 4284947 + | shikimate kinase I aroB 4285004 - 4286092 + | 3-dehydroquinate synthase TERM 5349 4286108 - 4286126 + F 77 -11 -3.15621 | opp_overlap 4286105, overlap 4286106 CAACAAGAAAGGTCA GGCCGCTT ATC AAGCGGTC TATTAGCTTCAGGTT TERM 5350 4286826 - 4286813 - g 75 -6.7 -4.431 | GACCCAGCCACAAAA TCAGC AACA GCTGA ACAATGTGGCGGTCA damX 4286184 - 4287476 + | hypothetical protein TERM 5351 4287699 - 4287720 + G 100 -13.1 -4.60073 | overlap 4287693 TTTTGTAGGTGCCGG GTCGGTGTT TCTC AACACCGAC TTTTCTCGTTATATC TERM 5352 4287892 - 4287912 + G 82 -3.1 -5.19879 | overlap 4287892 4287894 AACAAAAGCCAGGAT CCGTTCCGT CGG GCGGTACTG TTTTTATATTTGAAC TERM 5353 4288023 - 4288003 - g 79 -2.5 -5.24129 | GGCCGCTACAAAAAA CCCTATTTC CCG GAAGCAGAG TTGTATCACTTCGCT TERM 5354 4288406 - 4288362 - g 70 -3.7 -4.70659 | opp_overlap 4288368 4288372, overlap 4288372 CGGCACACGTAAAAA GGTG-GACGAACTGCTGGCTT TGTAC AAACCAGGAGT-CGTTTCACC CGCGAAAAAATAATT dam 4287583 - 4288419 + | DNA adenine methylase TERM 5355 4288432 - 4288420 - f 78 -6.3 -4.61482 | CCCGCGAAAAAATAA TTCTC AAG GAGAA GCGGATGAAACAGTA rpe 4288437 - 4289114 + | ribulose-phosphate 3-epimerase gph 4289107 - 4289865 + | phosphoglycolate phosphatase TERM 5356 4290766 - 4290719 - g 95 -15.9 -3.06183 | gap 1, overlap 4290728 4290755 GGTATGCTGACTGAA TTGCAGGAACGCTATCACCGTT TCCGC AACGATGA-AGCCTTCCTGCAA CAGGTGATGAAAGAC trpS 4289858 - 4290862 + | tryptophanyl-tRNA synthetase TERM 5357 4290992 - 4291005 + F 100 -9.5 -5.70829 | opp_overlap 4290992 GTCATCACTCTGAAA CCGGG GAAA CCCGG TTTTTTTATCCTCTT TERM 5358 4291005 - 4290992 - f 75 -9.5 -3.58343 | opp_overlap 4290992 GTCATCACTCTGAAA CCGGG GAAA CCCGG TTTTTTTATCCTCTT yhfZ 4291351 - 4292037 + | hypothetical protein yhfY 4292012 - 4292416 + | hypothetical protein TERM 5359 4292476 - 4292462 - f 82 -2.9 -5.54264 | opp_overlap 4292450, overlap 4292450 4292445 AAATATTCAAAAAAA TGAAT ATTTA ATTCA AGGAACAGAAACGAG TERM 5360 4292535 - 4292521 - g 76 -9.2 -3.72984 | opp_overlap 4292520, overlap 4292512 GTAGAAGCATTGAAA CGCCAG AAC CCGGCG CTGATTTCCGCCGCA yhfX 4292500 - 4293663 + | hypothetical protein yhfW 4293664 - 4294890 + | putative mutase yhfV 4294887 - 4295765 + | putative hydrolase yhfU 4295737 - 4296129 + | hypothetical protein yhfT 4296141 - 4297445 + | putative transport system permease protein yhfS 4297457 - 4298542 + | hypothetical protein TERM 5361 4298690 - 4298647 - T 100 -14.7 -4.18018 | gap 1, opp_overlap 4298651 4298652 4298657 4298660 4298687, overlap 4298648 4298651 GTGCGGGATGTAAAA TTCAG-TGCGCCAGCATCGC CGGAT GCGATGCTGGCGCATCTTAT CCGGCCTACGGTTAA TERM 5362 4298689 - 4298648 - T 100 -18.2 -3.10597 | gap 1, opp_overlap 4298651 4298652 4298657 4298660 4298687, overlap 4298647 4298651 TGCGGGATGTAAAAT TCAG-TGCGCCAGCATCGC CGGAT GCGATGCTGGCGCATCTTA TCCGGCCTACGGTTA TERM 5363 4298685 - 4298651 - T 100 -20.1 -2.76404 | opp_overlap 4298651 4298652 4298657 4298660, overlap 4298648 4298647 GGGATGTAAAATTCA GTGCGCCAGCATCGC CGGAT GCGATGCTGGCGCAT CTTATCCGGCCTACG TERM 5364 4298651 - 4298686 + T 100 -19.9 -3.30124 | gap 1, opp_overlap 4298648 4298647 4298651, overlap 4298652 4298657 4298660 GGGATGTAAAATTCA G-TGCGCCAGCATCGC CGGAT GCGATGCTGGCGCATC TTATCCGGCCTACGG TERM 5365 4298652 - 4298684 + T 100 -23.6 -3.21924 | opp_overlap 4298651 4298648 4298647, overlap 4298651 4298657 4298660 GGATGTAAAATTCAG TGCGCCAGCATCGC CGGAT GCGATGCTGGCGCA TCTTATCCGGCCTAC yhfR 4299499 - 4298702 - | DNA-binding transcriptional regulator FrlR TERM 5366 4299531 - 4299494 - G 72 -9.9 -3.33696 | opp_overlap 4299499, overlap 4299496 4299499 TTTTCCGGCAAGTAA CAGCACGTTGGCGTGAA GATG CTCACGCCAACGTTATA CCTACCAGGCACCGT TERM 5367 4299529 - 4299496 - G 70 -10.3 -3.23853 | opp_overlap 4299499, overlap 4299494 4299499 TTCCGGCAAGTAACA GCACGTTGGCGTGAA GATG CTCACGCCAACGTTA TACCTACCAGGCACC TERM 5368 4299499 - 4299526 + r 100 -15.7 -3.35679 | opp_overlap 4299496 4299494 4299499 CGGCAAGTAACAGCA CGTTGGCGTGA AGATGC TCACGCCAACG TTATACCTACCAGGC TERM 5369 4299526 - 4299499 - R 100 -16.4 -2.80699 | opp_overlap 4299499, overlap 4299496 4299494 CGGCAAGTAACAGCA CGTTGGCGTGAA GATG CTCACGCCAACG TTATACCTACCAGGC yhfQ 4300318 - 4299533 - | fructoselysine 6-kinase yhfP 4301145 - 4300315 - | fructoselysine 3-epimerase TERM 5370 4301123 - 4301138 + g 76 -7.6 -4.26903 | AGCCGCTGGTGGCCG CAGGTA AACA TACCTG TTTTCATCGGGTAAC TERM 5371 4301187 - 4301166 - R 90 -12.9 -3.53343 | opp_overlap 4301171, overlap 4301167 AACTCCTTGCGTAAA TCCGGCCCG TTGC CGGGCCGGG AGAGGGATTAATATT TERM 5372 4301186 - 4301167 - R 95 -16.4 -2.71791 | opp_overlap 4301171, overlap 4301166 ACTCCTTGCGTAAAT CCGGCCCG TTGC CGGGCCGG GAGAGGGATTAATAT frlB 4302238 - 4301195 - | fructoselysine-6-P-deglycase TERM 5373 4301599 - 4301626 + g 86 -6.3 -5.06816 | gap 1, opp_overlap 4301590 AAATCATCGGCCACT GGCTGGCCAGTT CACCA AGCTGGC-GGCC TTTTTCTTCCCAGGT TERM 5374 4303830 - 4303803 - R 93 -10.6 -4.65722 | gap 1, overlap 4303805 GGACATAGAAACAAA TACGCCCTC-GGA AAA TCCAGAGGGCGTC GGGCAATTAAACCGG TERM 5375 4303828 - 4303805 - R 95 -13.2 -3.92887 | gap 1, overlap 4303803 ACATAGAAACAAATA CGCCCTC-GGA AAA TCCAGAGGGCG TCGGGCAATTAAACC yhfL 4304037 - 4303870 - | hypothetical protein TERM 5376 4304181 - 4304219 + r 76 -4 -4.9448 | opp_overlap 4304183, overlap 4304183 CGCTGTAACGGTGAA TATAACCCATTAGCAGAT AAT ATTTATTAAGGGGTTATG TTTTATTTGCTGAAT TERM 5377 4304274 - 4304257 - R 86 -11.3 -3.74762 | AAGAGTCATTAAGAA GGCCAGA ATTC TCTGGCC CGGGTTAAATTAATG cysG 4305657 - 4304284 - | siroheme synthase TERM 5378 4304392 - 4304428 + g 81 -9.3 -4.11484 | opp_overlap 4304406, overlap 4304397 ACCGAGTTGCGTGAG CGTACCGTCAATCACGC GCT GCGTGACTGCCGTTCCG TTTTCGACAATTGCC TERM 5379 4304397 - 4304423 + g 76 -10.8 -3.36823 | opp_overlap 4304406, overlap 4304392 GTTGCGTGAGCGTAC CGTCAATCACGC GCT GCGTGACTGCCG TTCCGTTTTCGACAA TERM 5380 4304877 - 4304862 - G 82 -9 -4.25104 | GTTTGCCGACGAAAA CGCGAT CAGC ATCGCG GCGTACCAGATTCAT nirC 4306230 - 4305676 - | nitrite reductase, NirC protein TERM 5381 4306029 - 4306046 + g 74 -7.7 -4.07568 | opp_overlap 4306029 CTTTGAAGAACAGTA CCATTGC CGGT GCAGTGG TTTTAGCCAGCGCGA TERM 5382 4306569 - 4306536 - R 85 -6.1 -5.16472 | gap 1, overlap 4306537 AAAAAGTTTAAAAAA TGTCCTGCAATATACC GAA GGT-CATTACAGGACC ATGCAAAAAGGGGAG TERM 5383 4306568 - 4306537 - R 79 -9.6 -3.67443 | gap 1, overlap 4306536 AAAAGTTTAAAAAAT GTCCTGCAATATACC GAA GGT-CATTACAGGAC CATGCAAAAAGGGGA TERM 5384 4306599 - 4306579 - R 89 -8.9 -4.68994 | overlap 4306580 AGGACCATGCAAAAA GGGGAGGCA TTG CGCCTCCCG TTAAAACATTAACCG TERM 5385 4306598 - 4306580 - R 85 -12.4 -3.40674 | overlap 4306579 GGACCATGCAAAAAG GGGAGGCA TTG CGCCTCCC GTTAAAACATTAACC nirD 4306934 - 4306608 - | nitrite reductase small subunit TERM 5386 4306699 - 4306712 + g 71 -2.3 -5.00884 | opp_overlap 4306693 4306708 CACAAGCCATCACTT AAGCG AAAA CGCTG TTTTTTCAGCGGGCT TERM 5387 4306723 - 4306708 - G 70 -6.1 -4.28774 | opp_overlap 4306699 TCACTTAAGCGAAAA CGCTG TTTTTT CAGCG GGCTGGCGACCCACA nirB 4309474 - 4306931 - | nitrite reductase (NAD(P)H) subunit TERM 5388 4307662 - 4307685 + g 70 -5.2 -4.3467 | gap 1, opp_overlap 4307660 4307662, overlap 4307647 4307670 TCTGTGCGCCAAACA TCGCCAGGCGC TGG GAGCC-GGTGA TTTTGGTGTAGAGAT TERM 5389 4309728 - 4309701 - R 93 -10.5 -4.43213 | overlap 4309702 GGGAAGAGAGGAAAA GGCCGGACGAC GATAGT GCCGTCCGGCA TTAGCAATTAATGAG TERM 5390 4309727 - 4309702 - R 86 -14 -3.25205 | overlap 4309701 GGAAGAGAGGAAAAG GCCGGACGAC GATAGT GCCGTCCGGC ATTAGCAATTAATGA yhfC 4310917 - 4309736 - | hypothetical protein TERM 5391 4310324 - 4310334 + g 85 -6.8 -4.73388 | CTTTTCTTTCTCTAC CGGA GCA TCCG TTTTTGGTGCACGTT TERM 5392 4310533 - 4310516 - G 74 -7.7 -4.015 | gap 1, overlap 4310519 GGAGTCAGTAAATAA CAG-GCGG GAA CCGCGCTG ACGCCCTTCATACAT TERM 5393 4310871 - 4310848 - G 72 -8.8 -3.78934 | TCCCGGTGACAATAA CCAACGCACC AGTC AGTGCGTAGG AGAGAAAGCTAATCC TERM 5394 4310962 - 4310943 - H 73 -2.1 -5.26119 | overlap 4310944 CGTTCAAAAATAAAA TGGCATA GCGGGA TATGCCG CGAGCGGGCGATTTT ppiA 4311188 - 4311769 + | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 5395 4311779 - 4311800 + F 100 -17.3 -3.46602 | CCGTAATGATTTCTC GCGCGGGCA ATCT TGCCCGCGC TTCTGCTCTCCCGGC yhfG 4311874 - 4312041 + | hypothetical protein TERM 5396 4312336 - 4312322 - g 75 -5.6 -4.70659 | overlap 4312324 GCTTATATCGAAAAA GAGGGC AAT GCCCTG ATGCAGGATCTGGAG TERM 5397 4312334 - 4312324 - g 74 -8.2 -3.96999 | overlap 4312322 TTATATCGAAAAAGA GGGC AAT GCCC TGATGCAGGATCTGG fic 4312031 - 4312633 + | cell filamentation protein Fic pabA 4312665 - 4313228 + | para-aminobenzoate synthase component II argD 4313314 - 4314534 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein yhfK 4316691 - 4314601 - | hypothetical protein TERM 5398 4316730 - 4316706 - R 100 -16.5 -4.86731 | overlap 4316724 TCGGGGGAAACAAAA TGGCGCGCTAC CAG GTAACGCGCCA CTCCGACGGGATTAA crp 4317374 - 4316742 - | cAMP-regulatory protein TERM 5399 4317264 - 4317289 + g 70 -10.5 -2.76171 | overlap 4317262 GTAGTACAGCGTTTC CGCTTTTTCAC CCTG GTGAATAAGCG TGCTCTTGGATGGGT TERM 5400 4317730 - 4317742 + G 76 -7.7 -4.25104 | CTGGGCGAATCCGCC TCTGG TCA CCAGA TTTTAATGGACGGCA yhfA 4317676 - 4318080 + | hypothetical protein prkB 4319004 - 4318135 - | phosphoribulokinase yheU 4319276 - 4319058 - | hypothetical protein TERM 5401 4319138 - 4319162 + g 78 -8.5 -4.20769 | CCGCTTCTCCGCACT GTAGCTGGCGT TTG ACGTCGGCGAC TTTCTGTTCAAGTGT yheT 4320292 - 4319270 - | putative hydrolase TERM 5402 4320139 - 4320126 - G 70 -4.5 -4.45083 | GCGAGATCGACAAAA TCGCC GTCG GGCAA CTCCAGCCGCTGCCA yheS 4322205 - 4320292 - | putative ABC transporter ATP-binding protein TERM 5403 4320881 - 4320897 + g 70 -5 -4.56597 | opp_overlap 4320881, overlap 4320893 TGCCAGACAATTAAT GCCAGC ACCAG GCGGGC TTTTTCCCCACCGGA TERM 5404 4320908 - 4320932 + g 93 -12.9 -3.6053 | overlap 4320893 4320904 CGGGCTTTTTCCCCA CCGGAGAAGCG GCG CGTTTCTTCGG TTACTTTATCGCCCA yheR 4322336 - 4322887 + | glutathione-regulated potassium-efflux system ancillary protein KefG kefB 4322963 - 4324624 + | glutathione-regulated potassium-efflux system protein KefB TERM 5405 4324955 - 4324944 - g 72 -5.8 -4.39989 | overlap 4324946 ATGAAAGTAGCAAAA GACC TGGT GGTC AGCCTGGCCTATCAG slyD 4324929 - 4325519 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 5406 4325567 - 4325529 - T 100 -14.6 -4.29325 | opp_overlap 4325541, overlap 4325541 CACTAATACCGAAAA GGTGACAAAAAAGCGGGG AAT CCCCGCTTTTTTTACGCC TCAATAATGTGGCGG TERM 5407 4325555 - 4325541 - T 100 -12.8 -5.28826 | opp_overlap 4325541, overlap 4325529 AAAGGTGACAAAAAA GCGGGG AAT CCCCGC TTTTTTTACGCCTCA TERM 5408 4325541 - 4325555 + T 100 -12.8 -5.42259 | opp_overlap 4325541 4325529 AAAGGTGACAAAAAA GCGGGG AAT CCCCGC TTTTTTTACGCCTCA slyX 4325786 - 4325568 - | hypothetical protein fkpA 4326007 - 4326819 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 5409 4326862 - 4326817 - f 76 -4.2 -5.0133 | gap 2, opp_overlap 4326830, overlap 4326820 4326830 GATTCTGCTAAAAAA TAAGCATTAAGAACCGCCGCCT GACC AGGCGGCGGTTTTTT-TA-TTA CAGGCCGGATATAAT TERM 5410 4326863 - 4326820 - f 72 -4.7 -4.61482 | gap 2, opp_overlap 4326830, overlap 4326817 4326830 TCTGCTAAAAAATAA GCATTAAGAA--CCGCCGCCT GACC AGGCGGCGGTTTTTTTATTAC AGGCCGGATATAATT TERM 5411 4326830 - 4326851 + F 100 -17.3 -5.7946 | opp_overlap 4326817 4326820 4326830 AATAAGCATTAAGAA CCGCCGCCT GACC AGGCGGCGG TTTTTTTATTACAGG TERM 5412 4326851 - 4326830 - f 100 -17.3 -3.79396 | opp_overlap 4326830, overlap 4326817 4326820 AATAAGCATTAAGAA CCGCCGCCT GACC AGGCGGCGG TTTTTTTATTACAGG TERM 5413 4326902 - 4326890 - f 72 -9.1 -3.54919 | opp_overlap 4326890 4326888 4326886 AATTAGTGCTGGAAA GCGGA ACC TCCGC TGTATTAATTTAGTT TERM 5414 4326961 - 4326974 + F 78 -6.7 -4.59226 | opp_overlap 4326933 4326932 AAAGTTAACGACAGG CTCCT GAAA AGGAG TGTTTTTTTTCATGT TERM 5415 4327191 - 4327160 - g 76 -7.4 -4.21194 | gap 1 TTGCAGGATCTAAAA TGTTCAGCCATTCGC ATT GCTAACGG-TGAACA TACAGGCCGGAAGAT yheO 4326986 - 4327708 + | hypothetical protein yheN 4327708 - 4328094 + | hypothetical protein yheM 4328094 - 4328453 + | hypothetical protein yheL 4328461 - 4328748 + | tRNA 2-thiouridine synthesizing protein B TERM 5416 4328804 - 4328826 + F 100 -12.8 -4.7268 | CGCCCTAAAATTCGG CGTCCTCATA TTG TGTGAGGACG TTTTATTACGTGTTT rpsL 4328874 - 4329248 + | 30S ribosomal protein S12 rpsG 4329345 - 4329815 + | 30S ribosomal protein S7 TERM 5417 4329840 - 4329865 + F 82 -11.2 -3.63895 | gap 1, opp_overlap 4329857, overlap 4329857 AGTTTTAGTCACCAG GCGGGC-GCTT CCAGT AAGCAGCCCGC TTTGGGCTACTTAAA fusA 4330060 - 4332027 + | elongation factor EF-2 TERM 5418 4332053 - 4332078 + F 93 -15.5 -2.78935 | opp_overlap 4332049 4332048 TAATACCAAAGTCCC GTGCTCTCTCC TGAA GGGGAGAGCAC TATAGTAAGGAATAT TERM 5419 4332319 - 4332269 - g 74 -2.5 -5.06414 | overlap 4332271 4332312 GCGCCGGAAGAAAAA GCTCGTGGTATCACCATCAACAC TTCTC ACGTTGAATATGACACCCCGACC CGTCACTACGCACAC tuf 4332098 - 4333282 + | elongation factor Tu TERM 5420 4333312 - 4333327 + F 100 -11.8 -4.72986 | opp_overlap 4333312 GTTTTGAATTGAAAA GGGCGC TTCG GCGCCC TTTTTGCTGCCCGTA TERM 5421 4333327 - 4333312 - f 95 -11.8 -4.27316 | opp_overlap 4333312 GTTTTGAATTGAAAA GGGCGC TTCG GCGCCC TTTTTGCTGCCCGTA yheA 4333465 - 4333659 + | bacterioferritin-associated ferredoxin TERM 5422 4333891 - 4333915 + G 79 -2.2 -5.26119 | gap 1, opp_overlap 4333891 4333893, overlap 4333886 4333893 ATCGATGAGATGAAA CACGCT-GATA AATA TATCGAGCGTA TTTTGTTTTTAGAAG bfr 4333732 - 4334208 + | bacterioferritin, iron storage and detoxification protein TERM 5423 4334590 - 4334552 - f 71 -3.9 -4.84311 | gap 1, overlap 4334554 CTTGATAGAACAAAA GACCTGACCAGAGTAACG GGCA CGTAAATCTG-TCAGGTA ACAAGCCATGCTTTG rpsJ 4335051 - 4335362 + | 30S ribosomal protein S10 rplC 4335395 - 4336024 + | 50S ribosomal protein L3 TERM 5424 4336067 - 4336055 - g 78 -10.5 -3.42663 | opp_overlap 4336049, overlap 4336053 ATTAGTATTGAAAGA CGCGC AGA GCGCG CTGACTGTTTCCGAA rplD 4336035 - 4336640 + | 50S ribosomal protein L4 TERM 5425 4336670 - 4336682 + G 78 -9.1 -3.85817 | CTGCTGAAGGTGCTG CGTGC ACC GCACG TTTCTGAAAAAGCGT TERM 5426 4336921 - 4336901 - g 77 -9.7 -3.57462 | opp_overlap 4336904, overlap 4336904 TACGTCACCCTGAAA GAAGGCCAG AAT CTGGACTTC GTTGGCGGCGCTGAG rplW 4336637 - 4336939 + | 50S ribosomal protein L23 rplB 4336957 - 4337778 + | 50S ribosomal protein L2 rpsS 4337795 - 4338073 + | 30S ribosomal protein S19 rplV 4338088 - 4338420 + | 50S ribosomal protein L22 rpsC 4338438 - 4339139 + | 30S ribosomal protein S3 rplP 4339152 - 4339562 + | 50S ribosomal protein L16 rpmC 4339562 - 4339753 + | 50S ribosomal protein L29 TERM 5427 4339785 - 4339832 + G 86 -9.5 -4.36914 | gap 2, opp_overlap 4339802 TACTCTGCAAGGTCG CGTT-GTTAGCGACAA-AATGGA GAAA TCCATTGTTGTTGCTATCGAACG TTTTGTGAAACACCC rpsQ 4339753 - 4340007 + | 30S ribosomal protein S17 TERM 5428 4340032 - 4340057 + F 100 -14.9 -5.252 | opp_overlap 4340032 4340036 CTCTCTCGATACGAA TAAACGGCTCA GAAA TGAGCCGTTTA TTTTTTCTACCCATA TERM 5429 4340057 - 4340032 - f 90 -14.9 -3.25823 | opp_overlap 4340032, overlap 4340036 CTCTCTCGATACGAA TAAACGGCTCA GAAA TGAGCCGTTTA TTTTTTCTACCCATA TERM 5430 4340053 - 4340036 - f 91 -11.3 -4.29106 | opp_overlap 4340032, overlap 4340032 CTCGATACGAATAAA CGGCTCA GAAA TGAGCCG TTTATTTTTTCTACC rplN 4340172 - 4340543 + | 50S ribosomal protein L14 rplX 4340554 - 4340868 + | 50S ribosomal protein L24 TERM 5431 4340939 - 4340928 - g 81 -4.4 -5.12617 | opp_overlap 4340928, overlap 4340930 GAAGTAGTTAAAAAA CTCA TGAC TGAG TTTAACTACAATTCT TERM 5432 4341045 - 4341027 - g 93 -6 -5.24531 | ATCGCTGACAAAAAA CTGCTG GATAACG CAGCAG CAGACCTGGCAGCAA rplE 4340883 - 4341422 + | 50S ribosomal protein L5 rpsN 4341437 - 4341742 + | 30S ribosomal protein S14 rpsH 4341776 - 4342168 + | 30S ribosomal protein S8 rplF 4342181 - 4342714 + | 50S ribosomal protein L6 rplR 4342724 - 4343077 + | 50S ribosomal protein L18 rpsE 4343092 - 4343595 + | 30S ribosomal protein S5 rpmD 4343599 - 4343778 + | 50S ribosomal protein L30 TERM 5433 4343836 - 4343823 - g 75 -5.2 -4.59853 | opp_overlap 4343833, overlap 4343833 CGAAGGCTCCAAAAA GGCG GGTAAA CGCC TGGGTCGTGGTATCG rplO 4343782 - 4344216 + | 50S ribosomal protein L15 TERM 5434 4344657 - 4344688 + G 74 -10.2 -3.51032 | opp_overlap 4344662, overlap 4344663 CGAATATGCCTGGTA TGCAAGGCCTGG TGATTAAC CCGGGCTTTGCA TTCTACTTCACCGCT TERM 5435 4345022 - 4345068 + G 73 -9.4 -3.56921 | opp_overlap 4345028 4345035, overlap 4345020 AGCACACATTTACCG CTGAAAGTGAATATGGCGGGGG TAA TCCCGGCAATCTTCGCTTCCAG TATTATTCTGTTCCC secY 4344224 - 4345555 + | preprotein translocase subunit SecY rpmJ 4345587 - 4345703 + | 50S ribosomal protein L36 TERM 5436 4345733 - 4345762 + F 100 -12.3 -4.6645 | gap 1 TTTCTTGCAAAGTTG GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC TTTTGTATGTCTGTA TERM 5437 4346025 - 4346007 - g 77 -8.8 -4.05446 | TGTCTGAAGGACAAA TCGACACG CTG CGTGACGA AGTTGCCAAATTTGT rpsM 4345850 - 4346206 + | 30S ribosomal protein S13 rpsK 4346223 - 4346612 + | 30S ribosomal protein S11 TERM 5438 4346619 - 4346601 - f 76 -4.4 -5.00616 | opp_overlap 4346601 4346615 CGTCCGCCGAAAAAA CGTCGCGT ATA ACGCCTCG TTTTCCAGGTTTGTT TERM 5439 4347156 - 4347146 - g 70 -6.8 -4.12188 | overlap 4347147 TGAGCAGCGTGAAAA GCCA ACT TGGC TGGAAGTTGATGCTG rpsD 4346646 - 4347266 + | 30S ribosomal protein S4 TERM 5440 4347251 - 4347269 + F 74 -10.4 -3.14132 | ACACCTGATCGTCGA GCTTTACT CCA AGTAAAGC TTAGTACCAAAGAGA TERM 5441 4348198 - 4348186 - g 74 -3.4 -5.01732 | AACCTTGGTAAAAAA TCTC TTACT GAGA TTAAAGACGTGCTGG rpoA 4347292 - 4348281 + | DNA-directed RNA polymerase subunit alpha rplQ 4348322 - 4348705 + | 50S ribosomal protein L17 TERM 5442 4348695 - 4348685 - f 71 -6.8 -4.0371 | overlap 4348691 4348692 GATCGTTCAGAGAAA GCAG AAG CTGC TGCAGAGTAATCTGA TERM 5443 4348749 - 4348716 - f 90 -14.1 -3.37879 | opp_overlap 4348726, overlap 4348726 AGTAATCTGAAGCAA TGTAAAAAAACCCGC CCCG GCGGGTTTTTTTATA CCCGTAGTATCCCCA TERM 5444 4348726 - 4348739 + F 100 -9.5 -5.61596 | opp_overlap 4348716 4348726 AGCAATGTAAAAAAA CCCGC CCCG GCGGG TTTTTTTATACCCGT TERM 5445 4348739 - 4348726 - f 100 -9.5 -5.54192 | opp_overlap 4348726, overlap 4348716 AGCAATGTAAAAAAA CCCGC CCCG GCGGG TTTTTTTATACCCGT TERM 5446 4348871 - 4348844 - f 75 -9.9 -3.61398 | CCTGTCTGGCAACAA TCGCGCCCATC TATATT GATGGACACGA ACGATGAATTCCCAG TERM 5447 4349211 - 4349223 + G 73 -9.1 -3.62046 | opp_overlap 4349204 GCTAAGCAGGCATTA CAGCC TGG GGCTG TTGTTGCCCGGATCG S4437 4348875 - 4349549 + | ISSfl3 orfA S4438 4349546 - 4349896 + | ISSfl3 orfB TERM 5448 4350124 - 4350087 - g 70 -6.2 -4.1585 | overlap 4350088 4350092 TCATAAGCTTGAAAA TCAGATCCGACAGGCA GAAAAA CGACTGTCGGAACTGG AAAACCGGCTGAACA TERM 5449 4350146 - 4350129 - g 82 -9.1 -4.19238 | overlap 4350142 GTCGGAACTGGAAAA CCGGCTG AACA CAGCCAG AAATCTTCTGGAAGA S4439 4349893 - 4350465 + | ISSfl3 orfC S4440 4350527 - 4351489 + | ISSfl3 orfD S4441 4351813 - 4352178 + | insertion sequence 2 OrfA protein S4442 4352136 - 4353041 + | insertion element IS2 transposase InsD TERM 5450 4353160 - 4353137 - T 86 -11.1 -3.73224 | opp_overlap 4353140 GCAGTTGTTATTAAA GGATACCCT TTTACG AGGGTATCC CTTCAGACTGATAAC yjiI 4353824 - 4353240 - | RNA 2'-phosphotransferase-like protein TERM 5451 4354071 - 4354060 - H 95 -3 -5.90231 | opp_overlap 4354060 ACAAACACAAAAAAA CAAT GGGG ATTG TTATGACACAACAAG yjiH 4354062 - 4354757 + | hypothetical protein TERM 5452 4354802 - 4354777 - g 70 -4.7 -4.57569 | opp_overlap 4354795 4354798 4354799 TCAGGTCCGCAAAAA CGTCATGGATA TGTT TATCGATGGCG CGCGCCGTGGCTTTA yjiG 4354754 - 4355215 + | hypothetical protein TERM 5453 4355394 - 4355415 + G 75 -5.1 -4.71426 | gap 1, overlap 4355395 4355395 CGGTTGTCGATCTCA GC-GGGCAGA TCC TCTGCCCAGG TTTTATTGATCAACA iadA 4355228 - 4356400 + | isoaspartyl dipeptidase yjiE 4356465 - 4357376 + | putative DNA-binding transcriptional regulator yjiD 4357770 - 4357369 - | hypothetical protein S4449 4358550 - 4358047 - | IS1 orfB S4450 4358744 - 4358469 - | IS1 orfA TERM 5454 4358929 - 4358915 - R 72 -5.8 -4.40333 | TGTAAATAATATAAA TTGATA ACA TATCAA ATACATCAAAAATAC TERM 5455 4360168 - 4360144 - R 83 -9.3 -4.2528 | opp_overlap 4360144, overlap 4360118 4360117 4360115 4360111 TCTTAATTTAAGAAA GCGCAAGGA ACGTTTA CCCTTGCGC TTATTATAATAAGTC TERM 5456 4360144 - 4360168 + r 74 -8.6 -3.8512 | opp_overlap 4360118 4360117 4360115 4360111 4360144 TCTTAATTTAAGAAA GCGCAAGG AACGTTTAC CCTTGCGC TTATTATAATAAGTC uxuR 4360955 - 4360182 - | DNA-binding transcriptional repressor UxuR TERM 5457 4361145 - 4361114 - R 100 -12.5 -4.94243 | GCAAAAAAACGAAAA CTGGTCAACCAAA TATCAG TTTGATTGACCAG TAAGTCTGTAGGGTA uxuB 4362630 - 4361170 - | D-mannonate oxidoreductase TERM 5458 4362364 - 4362378 + g 72 -4.9 -4.62336 | GATAATTTTCAGCTC GGTGC TTTCT GCGCC TTTTTCCGCTACGGT TERM 5459 4362397 - 4362408 + g 86 -5.8 -5.15117 | TTCCGCTACGGTGTA CAGC AGTT GCTG TTTTTTCAGGTTTTC TERM 5460 4362704 - 4362680 - R 100 -15 -3.58329 | opp_overlap 4362676, overlap 4362676 GCAAGGAAGAAGGAA CCGGCACGGC GCGCA GCCATGCCGG TGGGTATTAACGGCT uxuA 4363895 - 4362711 - | mannonate dehydratase TERM 5461 4362836 - 4362866 + g 70 -6.9 -4.0098 | gap 1 CGTCCAGCATCTGAT GACCGTGGTCCGGA CGCA TCGGGATCA-GGTC TTCTTTGCCTTCCGC gntP 4364235 - 4365578 + | fructuronate transporter TERM 5462 4365615 - 4365584 - T 95 -11.6 -4.19746 | gap 1, overlap 4365586 4365589 GGTAGCGTAAAAGAA CA-CCAGAGCCTGCC AAT GGCAGGCTCAGACTG ATGACTAAAGTCTAA TERM 5463 4365612 - 4365586 - T 100 -14.4 -3.69506 | overlap 4365584 4365589 TAGCGTAAAAGAACA CCAGAGCCTGCC AAT GGCAGGCTCAGA CTGATGACTAAAGTC TERM 5464 4365609 - 4365589 - T 100 -16.9 -2.94356 | overlap 4365586 4365584 CGTAAAAGAACACCA GAGCCTGCC AAT GGCAGGCTC AGACTGATGACTAAA fimH 4366731 - 4365829 - | minor fimbrial subunit, D-mannose specific adhesin TERM 5465 4366625 - 4366655 + g 70 -6.9 -4.07885 | gap 1, opp_overlap 4366613 4366611 ACATTAGCGCTGCCA CCGCCAATAGGGAT AGCG GTACC-ATTGGCGG TTTTACAGGCGAATG fimG 4367254 - 4366751 - | minor fimbrial subunit, precursor polypeptide fimF 4367797 - 4367267 - | minor fimbrial subunit, precursor polypeptide TERM 5466 4367734 - 4367705 - G 82 -12.9 -2.87931 | GTTATCTCTGACATA GCCGCGGATAGTA ATCG TGCTATCCGCAGC CAAAACGCGACTTAC TERM 5467 4368474 - 4368486 + r 79 -10.5 -3.56643 | TTACCATCGCCTCCC CCGGC ATA GCCGG TTTGCACGCTATAAC S4460 4370374 - 4369871 - | IS1 orfB S4461 4370568 - 4370293 - | IS1 orfA fimC 4372011 - 4371286 - | periplasmic chaperone TERM 5468 4371700 - 4371720 + g 88 -2.6 -5.54192 | opp_overlap 4371702, overlap 4371702 GTTATTTGTTGCATC AAGAATAC GTAAG GTATTCTC TTTTTTTCCCTTCAT TERM 5469 4371702 - 4371718 + g 70 -5.2 -4.40173 | opp_overlap 4371702, overlap 4371700 TATTTGTTGCATCAA GAATAC GTAAG GTATTC TCTTTTTTTCCCTTC TERM 5470 4371843 - 4371855 + g 77 -6.3 -4.62069 | CATTATTTGTCACGG CAAGT TGC ACTTG TTTTTGCCCTGCCGG fimI 4372686 - 4372048 - | fimbrial protein fimA 4373200 - 4372652 - | major type 1 subunit fimbrin (pilin) fimE 4374277 - 4373681 - | tyrosine recombinase TERM 5471 4374392 - 4374363 - R 91 -8 -5.10064 | CCCAATAGATAAAAA GATAACCACACA CGAAGT TATGTGGCTATC AGTCAATTACATTAA TERM 5472 4374442 - 4374427 - R 83 -4 -5.38839 | opp_overlap 4374434, overlap 4374429 CATACAAAAATAAAA TATCAC TGAT GTGACA ACATCTATTTTCATT TERM 5473 4374775 - 4374763 - R 72 -5.5 -4.3898 | opp_overlap 4374768, overlap 4374768 ACTATCTCTATAAAA CAGCA TGA CGCTG TCGTCCTCTGGCTCT fimB 4375357 - 4374872 - | recombinase; regulator for fimA TERM 5474 4375063 - 4375037 - G 81 -5.8 -4.85599 | CTTACGTGATAAAAA TACCCACTCGCT CTC AGCATGCGGATA AGAAGTACGGATACT TERM 5475 4375393 - 4375416 + H 76 -4.6 -4.94902 | overlap 4375383 GACGCGCACTAGCTG TGCTGGGTTA GCAA TAATCCAACA TTTTTATCCTGATTA TERM 5476 4376170 - 4376180 + H 78 -5.4 -4.7923 | overlap 4376175 ACTCTCACTGAGTTA GCTT GCA AAGC TTTCTTTGTTTAGAT yjhA 4376979 - 4377527 + | hypothetical protein TERM 5477 4378424 - 4378410 - gf 70 -5 -4.4648 | AGGTTCACGAGAAAA TTACCA GAA CGGTAA GAACTATGCGCATGA yjhT 4377439 - 4378653 + | hypothetical protein TERM 5478 4378661 - 4378680 + F 76 -12.1 -2.69246 | opp_overlap 4378655 4378654, overlap 4378657 4378654 AAAACTAACGCTTCA GGGCCCC GGTAAA GGGGCCC TGCTATCAATTTGTC yjhS 4378940 - 4379698 + | hypothetical protein S4471 4380670 - 4380167 - | IS1 orfB S4472 4380864 - 4380589 - | IS1 orfA TERM 5479 4381113 - 4381102 - g 74 -3 -5.02074 | TGACGTTCCAAAAAA TCAT CGTG ATGA CTTACCTATTGCAAT S4473 4380959 - 4381654 + | DeoR family transcriptional regulator S4474 4381871 - 4381755 - | hypothetical protein TERM 5480 4381787 - 4381798 + g 72 -5.8 -4.3898 | CATCCTTGACCAGTA GCCA GATA TGGC TTTTGTCGCAGTCCT S4475 4382130 - 4382408 + | ISEhe3a orf S4476 4382477 - 4382779 + | IS600 orfA S4477 4382920 - 4383633 + | IS600 orfB S4479 4384901 - 4385176 + | IS1 orfA S4480 4385095 - 4385598 + | IS1 orfB S4481 4385791 - 4386093 + | IS911 orfA TERM 5481 4386551 - 4386540 - g 77 -5.8 -4.63218 | opp_overlap 4386545 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG S4483 4386333 - 4386959 + | IS911 orfB S4839 4388145 - 4386934 - | putative P4-type integrase TERM 5482 4387678 - 4387655 - G 86 -12.4 -3.53444 | GTACGCTGCTGTAAA CGGGCGGC AACTTCGA GCCGCCCG GATGACTCGACTGCT TERM 5483 4388329 - 4388314 - H 100 -9 -5.64274 | opp_overlap 4388312 4388314 TTAGGCACAAAAAAA GACGTC CGTT GACGTC TATTGATGTTCCGAT yjgB 4388582 - 4389643 + | putative oxidoreductase TERM 5484 4389649 - 4389672 + F 74 -10.2 -3.21872 | CGACTTCTGATCCCT TTGCCGGGTG CTGT CGCCCGGCAC TTAAATCTCTTTGGA TERM 5485 4390731 - 4390745 + G 70 -7 -4.07568 | overlap 4390723 CGGTAATCGTGTTCA GCACGC TTT GCGGGC TTTTACGCCAAAAGA yjgR 4389772 - 4391286 + | hypothetical protein TERM 5486 4391370 - 4391385 + T 83 -10.4 -3.73336 | opp_overlap 4391370 GTCAACAATAATAAA GGGAGC TTTC GCTCCC TTGTTAGATTACGAT TERM 5487 4391385 - 4391370 - T 93 -10.4 -4.57882 | opp_overlap 4391370 GTCAACAATAATAAA GGGAGC TTTC GCTCCC TTGTTAGATTACGAT yjgQ 4392476 - 4391394 - | hypothetical protein yjgP 4393576 - 4392476 - | hypothetical protein TERM 5488 4392686 - 4392655 - G 75 -4.4 -4.73613 | gap 1, overlap 4392658 GGATCAGGAAGAAAA GTAGATACAG-CAGC ATG GCTGGCAGCATCGAC AGTACGCGTCCCTGA TERM 5489 4392705 - 4392691 - G 73 -11.4 -2.65264 | GCAGCATCGACAGTA CGCGTC CCT GACGCG GGTTAACCACGCTCA TERM 5490 4395305 - 4395280 - g 70 -4.5 -4.54727 | opp_overlap 4395282, overlap 4395281 4395282 TCTGGTAAAGCAAAA GGCGCAACCGG TCGT CCGGTAGCGTT GCTGGCACAGTTCCT TERM 5491 4395282 - 4395303 + G 77 -11.5 -3.14881 | opp_overlap 4395281 4395280 4395282 TGGTAAAGCAAAAGG CGCAACCGG TCGT CCGGTAGCG TTGCTGGCACAGTTC TERM 5492 4395303 - 4395282 - g 73 -11.5 -2.5893 | opp_overlap 4395282, overlap 4395281 4395280 TGGTAAAGCAAAAGG CGCAACCGG TCGT CCGGTAGCG TTGCTGGCACAGTTC pepA 4393843 - 4395354 + | leucyl aminopeptidase TERM 5493 4395767 - 4395749 - g 70 -4.5 -4.56597 | gap 1, opp_overlap 4395749 GCCTGGCCGCAAAAA CGCAGCAG CAGC CCGC-GCG ATATATTGATTAGTC holC 4395488 - 4395931 + | DNA polymerase III subunit chi TERM 5494 4396162 - 4396146 - g 72 -4.3 -4.62783 | overlap 4396149 CATGCAGGGCAAAAA CACCCTG TGG CAGGTCG GTACTGACCACGCCG TERM 5495 4397426 - 4397406 - g 74 -7.5 -4.07568 | overlap 4397408 TGGCTGGCCGGAAAA TACCGACGC CCT GCGTCAGTT CCACCCAACCAGCGT TERM 5496 4397424 - 4397408 - g 77 -10.1 -3.63744 | overlap 4397406 GCTGGCCGGAAAATA CCGACGC CCT GCGTCAG TTCCACCCAACCAGC valS 4395931 - 4398786 + | valyl-tRNA synthetase TERM 5497 4398832 - 4398805 - T 87 -9.8 -4.3014 | opp_overlap 4398809, overlap 4398809 ACACAGTGATGAAAA CGAAGGCCGGAG CATG CTCCGGCCTTTT TTATCTCTTACAGAA TERM 5498 4398828 - 4398809 - T 100 -15 -3.72073 | opp_overlap 4398809, overlap 4398805 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC TERM 5499 4398809 - 4398828 + T 100 -15 -5.47431 | opp_overlap 4398809 4398805 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC yjgN 4400036 - 4398840 - | hypothetical protein TERM 5500 4398882 - 4398893 + g 70 -5.8 -4.17263 | opp_overlap 4398881 TCCCCGAGAAATACT GGCT AAGA AGCC TTTATCTGGTTGTTC TERM 5501 4400018 - 4399996 - G 79 -2.6 -5.3104 | opp_overlap 4399999 4400001, overlap 4400001 CCATGAAAAACAAAA GAATGGGACG GAA CATCCATTTC ATTAATAACTTGAGC TERM 5502 4400760 - 4400735 - R 100 -9 -5.47399 | opp_overlap 4400735 CGAACTCTAAAAAAA TGCCCGCTAG TATGTG CTATCGGGCA TTTTAATCAATTAAT TERM 5503 4400735 - 4400760 + r 87 -9.7 -4.31379 | opp_overlap 4400735 CGAACTCTAAAAAAA TGCCCGCTAGT ATGT GCTATCGGGCA TTTTAATCAATTAAT yjgD 4401191 - 4400775 - | hypothetical protein argI 4401353 - 4402366 + | ornithine carbamoyltransferase subunit I S4497 4402438 - 4402713 + | IS1 orfA S4498 4402632 - 4403135 + | IS1 orfB TERM 5504 4403990 - 4403959 - T 71 -7.4 -3.85698 | overlap 4403960 CGCTCTTTTCACAAA CTCGCCGTAAAC CTGGAGTT ATTTACGGCGAA AAGTCATCACGCCAT yjgK 4404449 - 4403997 - | hypothetical protein yjgJ 4404848 - 4404594 - | hypothetical protein S4502 4405075 - 4404920 - | hypothetical protein yjgI 4405258 - 4405971 + | oxidoreductase TERM 5505 4405991 - 4406016 + F 91 -8.3 -4.93877 | opp_overlap 4405991 4405990 CTACGCTCAATTAAG CCCAGCCATTA TCCA TGATGTCTGGG TTTTGTTTACTAACG yjgH 4406103 - 4406498 + | hypothetical protein yjgG 4406799 - 4406467 - | hypothetical protein TERM 5506 4406610 - 4406596 - Gf 100 -2.8 -5.95286 | ATGAAAAAGAAAAAA GCAG GAAATGT CTGC AATTATTGATACCGA TERM 5507 4406868 - 4406885 + GH 100 -12.7 -5.81412 | GATCACCCATTCCCA GCCCCTC AATC GAGGGGC TTTTTTTTGCCTAGG pyrL 4406779 - 4406913 + | pyrBI operon leader peptide TERM 5508 4407182 - 4407172 - g 71 -2.4 -5.02074 | TCACTGGGTAAAAAA GGCG AAA CGCT GGCCGATACCATTTC pyrB 4406917 - 4407852 + | aspartate carbamoyltransferase catalytic subunit pyrI 4407865 - 4408326 + | aspartate carbamoyltransferase regulatory subunit TERM 5509 4408345 - 4408370 + F 93 -10.5 -4.61231 | opp_overlap 4408345 CGGTTGGTAATAAAA GTCTGGCTC CCTATAAT GAGCCAGAC TTTTTACCGCTGTAA TERM 5510 4408370 - 4408345 - f 93 -10.5 -4.63218 | opp_overlap 4408345 CGGTTGGTAATAAAA GTCTGGCTC CCTATAAT GAGCCAGAC TTTTTACCGCTGTAA yjgF 4408360 - 4408785 + | hypothetical protein TERM 5511 4408798 - 4408817 + T 74 -10.7 -3.14468 | opp_overlap 4408798 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA TERM 5512 4408817 - 4408798 - T 83 -10.7 -3.65827 | opp_overlap 4408798 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA mgtA 4411687 - 4408991 - | magnesium-transporting ATPase MgtA TERM 5513 4411354 - 4411338 - G 70 -5.1 -4.41348 | CCTGCGGCAAATAAA TCTTCCG TGG CGTAAGA AATAGCACCAAGAAT treR 4412066 - 4413013 + | trehalose repressor TERM 5514 4413053 - 4413066 + F 91 -8.1 -4.92239 | ATCTTCGCTGCGTTT CGGGA ACGT TCCCG TTTTTAAATTTTTCC treB 4413135 - 4414553 + | trehalose(maltose)-specific PTS system components IIBC TERM 5515 4415544 - 4415556 + G 72 -7.7 -3.87104 | opp_overlap 4415541 AGGAATGCACAACGT GGCAT GGA ATGCC TTGTTCTGGTGTAAC TERM 5516 4416147 - 4416133 - g 75 -11.4 -3.1247 | AGCCGTGAGATCCAA CCCTGG CAG CCAGGG CAAATGCGCGGCAAC treC 4414603 - 4416258 + | trehalose-6-phosphate hydrolase TERM 5517 4416439 - 4416429 - f 74 -5.4 -4.57275 | overlap 4416432 CAAAAAAAGTTAAAA CATC CTT GATG CAAAGCACTATATAT TERM 5518 4416961 - 4416934 - g 77 -6.2 -4.67234 | gap 1, opp_overlap 4416933 4416936, overlap 4416936 ATTGAACGTGAAAAA CGCGG-TCGCCTG AAC CAGGAGATCCGTG GTCTGGTCGAGCAGA nrdD 4416652 - 4418790 + | anaerobic ribonucleoside triphosphate reductase TERM 5519 4418844 - 4418813 - f 80 -10 -3.90112 | opp_overlap 4418809 4418813 4418823, overlap 4418814 4418831 TCTGCGCTAAGCAAA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACATTTGGCAACGG TERM 5520 4418813 - 4418844 + F 78 -12.2 -2.64155 | opp_overlap 4418813 4418814 4418831, overlap 4418809 4418823 TCTGCGCTAAGCAAA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACATTTGGCAACGG TERM 5521 4418843 - 4418814 - f 82 -13.5 -2.93853 | opp_overlap 4418813 4418809 4418823, overlap 4418813 4418831 CTGCGCTAAGCAAAT GCCGGATGCGGCG TAAA CGCCTTATCCGGC CTACATTTGGCAACG TERM 5522 4418878 - 4418831 - f 88 -12.2 -3.53811 | opp_overlap 4418823 4418813 4418809 4418865 4418866, overlap 4418814 4418813 4418875 CGGATGCGGCGTAAA CGCCTTATCCGGCCTACA TTTGGCAACGGC TGTAGGCCTGATAAGACG CGACAGCGTCGCATC TERM 5523 4418865 - 4418898 + F 73 -9.5 -3.34344 | opp_overlap 4418831 4418875, overlap 4418866 TTGGCAACGGCTGTA GGCCTGATAAGACGC GACA GCGTCGCATCAGGCA TTGATTACCGGATGC TERM 5524 4418866 - 4418897 + F 81 -13 -2.60392 | opp_overlap 4418831 4418875, overlap 4418865 TGGCAACGGCTGTAG GCCTGATAAGACGC GACA GCGTCGCATCAGGC ATTGATTACCGGATG TERM 5525 4418893 - 4418875 - f 79 -11 -3.30124 | opp_overlap 4418866 4418865, overlap 4418831 CTGTAGGCCTGATAA GACGCGAC AGC GTCGCATC AGGCATTGATTACCG nrdG 4418948 - 4419412 + | anaerobic ribonucleotide reductase-activating protein TERM 5526 4419449 - 4419416 - T 93 -14.7 -3.4072 | overlap 4419417 CATTTGCGATGATAA GTTCCCTGTTACCTG AGTG CAGGCAACAGGGAAA TGAGGAATTAACGAT TERM 5527 4419448 - 4419417 - T 100 -18.2 -2.64218 | overlap 4419416 ATTTGCGATGATAAG TTCCCTGTTACCTG AGTG CAGGCAACAGGGAA ATGAGGAATTAACGA TERM 5528 4419996 - 4420017 + T 73 -2.1 -5.14563 | overlap 4419997 GTAATTTTTTAGTTT ATAGCGCGG CAGG TCGCGCCAG TTTTTTACTGCCCGG pmbA 4421374 - 4420022 - | peptidase PmbA yjgA 4421468 - 4422019 + | hypothetical protein TERM 5529 4422042 - 4422081 + T 79 -12.8 -2.88544 | overlap 4422045 4422056 TGTTGATGTGAGTAT GGTTTGCCGGATGCGGCG TAAA CGCCTTATCCGGCAATGC TATATCAGGCTGAAG TERM 5530 4422045 - 4422078 + T 100 -17.5 -2.69468 | overlap 4422042 4422056 TGATGTGAGTATGGT TTGCCGGATGCGGCG TAAA CGCCTTATCCGGCAA TGCTATATCAGGCTG yjfG 4423475 - 4422102 - | putative ligase TERM 5531 4423706 - 4423683 - g 81 -9.6 -4.09864 | ATTTATTGTCGAAAA GCAGCACGAG TTTT CTCATGCTAC CGGTGAGCTCACTGC TERM 5532 4424453 - 4424467 + G 74 -8.6 -3.91897 | CCAGCCACCCGGACG GCAAAC TGC GTTTGC TTTATGAGTGCAACC fbp 4423651 - 4424649 + | fructose-1,6-bisphosphatase TERM 5533 4424676 - 4424705 + T 89 -9.3 -4.59109 | opp_overlap 4424677 4424678, overlap 4424678 TCTCCACACGGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5534 4424704 - 4424677 - T 81 -12.8 -3.20382 | opp_overlap 4424676 4424678, overlap 4424678 CTCCACACGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 5535 4424678 - 4424703 + T 100 -16.3 -3.90762 | opp_overlap 4424678 4424677, overlap 4424676 TCCACACGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 5536 4424703 - 4424678 - T 90 -16.3 -2.52015 | opp_overlap 4424676 4424678, overlap 4424677 TCCACACGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG S4521 4426015 - 4424687 - | IS4 orf TERM 5537 4426048 - 4426023 - R 100 -9.8 -5.61596 | opp_overlap 4426023 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 5538 4426023 - 4426048 + r 72 -9.1 -3.61398 | opp_overlap 4426023 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 5539 4426821 - 4426807 - R 71 -7.8 -3.90328 | overlap 4426820 CAGAAGCCCCATAAA TGCGCC GAA GGCACA GCCCATCACCAGCAC TERM 5540 4427098 - 4427074 - R 71 -7.8 -3.97388 | overlap 4427076 ATAGCCCAGCACAAA GACGCCGATG GTGAT CATCAGCGGC AAGTTACGTTTTATC TERM 5541 4427096 - 4427076 - R 72 -9 -3.57674 | overlap 4427074 AGCCCAGCACAAAGA CGCCGATG GTGAT CATCAGCG GCAAGTTACGTTTTA ytfT 4428127 - 4427102 - | putative transport system permease protein TERM 5542 4427615 - 4427603 - G 76 -9.1 -3.71848 | CGTTGGCAGGAACAA CAGCG ATC CGCTG CCAAACCATGAGAGA TERM 5543 4428096 - 4428084 - G 70 -6.2 -4.18018 | opp_overlap 4428084 GTCGGCCAGTGAAAA CGCC TTTTT GGCG GCGTAGTGTCAGGGA ytfR 4429640 - 4428138 - | putative ATP-binding component of a transport system TERM 5544 4429920 - 4429910 - H 72 -8.2 -3.65902 | opp_overlap 4429918 TCCAGCGCATCGAAA GCGG GTC CCGC CATGTTCGGCGTCAG TERM 5545 4430548 - 4430564 + H 71 -7.3 -4.12902 | CTGGTTTTCCTGCTT TTGCTGA CCA TCGGCAA TTTTCAACGTAATTC ppa 4431046 - 4431576 + | inorganic pyrophosphatase TERM 5546 4431924 - 4431947 + TF 70 -2.2 -4.95167 | opp_overlap 4431924 4431927, overlap 4431919 4431927 ATACATCGCATAAAA CAACGCCACC CGAA GGAGGCGTGC TTTTATTATTACTTA TERM 5547 4431946 - 4431924 - Tf 72 -5.5 -4.4195 | gap 1, opp_overlap 4431924 4431919 4431927, overlap 4431927 ATACATCGCATAAAA CAACGCCACC CGAA GGAGGCG-TG CTTTTATTATTACTT TERM 5548 4431944 - 4431927 - Tf 79 -8.3 -4.32067 | opp_overlap 4431924 4431919 4431927, overlap 4431924 CATCGCATAAAACAA CGCCACC CGAA GGAGGCG TGCTTTTATTATTAC ytfP 4432297 - 4431956 - | hypothetical protein yjfA 4431952 - 4432215 + | hypothetical protein TERM 5549 4432220 - 4432234 + gT 73 -11.4 -2.52834 | opp_overlap 4432219 4432218, overlap 4432219 4432223 4432232 ATCGATACTGAAATC GCCCAG TAA CTGGGC ATTGGTCATCCAGTG ytfN 4436079 - 4432300 - | hypothetical protein TERM 5550 4432350 - 4432329 - G 70 -10.9 -2.70315 | overlap 4432326 4432325 GATAGAGCAAATCCA GTGCCTGGT CTAC ACCAGACAC GGCTTCCAGATATAG TERM 5551 4433945 - 4433984 + g 79 -2.1 -5.22794 | gap 1, overlap 4433948 4433963 TGCGGCACGCACAGT TCCGCATTCGGGTTAAGC CAGCA GTGTGGCCCG-ATGCTGA TTTTTTGCTCCTTAT TERM 5552 4435469 - 4435480 + g 72 -5.8 -4.43272 | CCGAGCGGCTTTTCC TCCG GCTG CGGA TTTTCAATTTTCGGT ytfM 4437809 - 4436076 - | hypothetical protein TERM 5553 4437884 - 4437871 - H 70 -2.4 -5.06816 | ACGGCTTAACAAAAA TCCA GTAATA TGGA TTAAAAAGCAGACTA msrA 4438015 - 4438653 + | methionine sulfoxide reductase A ytfL 4438976 - 4440319 + | putative transport protein TERM 5554 4440363 - 4440330 - T 71 -7.5 -3.89614 | gap 1, opp_overlap 4440334 4440336, overlap 4440332 4440336 CGTAACCCCCAGAAA CATCA-ACGGCTCCTG AAT CAGGAGCCGTCTTATT ACTGCATAGCACTTT TERM 5555 4440361 - 4440332 - T 75 -10.1 -3.5362 | gap 1, opp_overlap 4440334 4440336, overlap 4440330 4440336 TAACCCCCAGAAACA TCA-ACGGCTCCTG AAT CAGGAGCCGTCTTA TTACTGCATAGCACT TERM 5556 4440334 - 4440358 + T 100 -14.3 -3.73647 | opp_overlap 4440332 4440330 4440336, overlap 4440336 ACCCCCAGAAACATC AACGGCTCCTG AAT CAGGAGCCGTC TTATTACTGCATAGC TERM 5557 4440336 - 4440356 + T 100 -16.9 -3.44998 | opp_overlap 4440332 4440330 4440336, overlap 4440334 CCCCAGAAACATCAA CGGCTCCTG AAT CAGGAGCCG TCTTATTACTGCATA TERM 5558 4440356 - 4440336 - T 100 -16.9 -3.50335 | opp_overlap 4440336 4440334, overlap 4440332 4440330 CCCCAGAAACATCAA CGGCTCCTG AAT CAGGAGCCG TCTTATTACTGCATA ytfK 4440626 - 4440381 - | hypothetical protein ytfJ 4440912 - 4441466 + | hypothetical protein TERM 5559 4442108 - 4442120 + T 75 -6.3 -4.51812 | opp_overlap 4442108, overlap 4442104 TTTGAAATCCATGAA TGAGT TAT ACTCA TTTATTGTTATGGGA TERM 5560 4442676 - 4442634 - T 80 -10.1 -3.86346 | gap 1, opp_overlap 4442633 4442634 4442638 TTAGGTTGGGATAAA TCAGGATGGCAGAATCAG GAAATACA CTGTTTCTGCCATC-TGA ATTTAGTAAATGGAC TERM 5561 4442638 - 4442673 + T 76 -12 -2.68279 | opp_overlap 4442634, overlap 4442634 4442633 GTTGGGATAAATCAG GATGGCAGAATCAG GAAATACA CTGTTTCTGCCATC TGAATTTAGTAAATG cysQ 4443419 - 4442679 - | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 5562 4443254 - 4443236 - G 74 -8.8 -3.86015 | overlap 4443239 GATCTTCTTCAGAAA GGACCGGA ATA TCCGGTGC CAGCGTACGTAAACC TERM 5563 4444898 - 4444887 - g 70 -3.6 -4.59773 | GTGGAGGTGGAAAAA GGCC AGTT GACC TTCCGTAATGCCGCC cpdB 4443609 - 4445552 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 5564 4445609 - 4445581 - Tf 82 -11 -3.6053 | opp_overlap 4445599 4445601 4445608, overlap 4445577 4445582 CGGCCTATAAATCAA CCGCATCCGGCA TTTAT TGGCGGATGCGA TGCTGCCGTATCTTA TERM 5565 4445608 - 4445582 - Tf 79 -12.3 -2.75997 | opp_overlap 4445599 4445601, overlap 4445581 4445577 GGCCTATAAATCAAC CGCATCCGGCA TTTAT TGGCGGATGCG ATGCTGCCGTATCTT ytfH 4446148 - 4445678 - | hypothetical protein TERM 5566 4446862 - 4446844 - gH 72 -6.6 -4.18018 | overlap 4446845 CCGCGGCACTGAAAA GCGTCGGA CTG CCCGACGG ACTGGCGGATATGCT TERM 5567 4446861 - 4446845 - gH 70 -10.1 -3.10597 | overlap 4446844 CGCGGCACTGAAAAG CGTCGGA CTG CCCGACG GACTGGCGGATATGC ytfG 4446147 - 4447007 + | putative oxidoreductase ytfF 4447116 - 4448081 + | putative transmembrane subunit ytfE 4448189 - 4448851 + | cell morphogenesis/cell wall metabolism regulator TERM 5568 4448883 - 4448859 - T 100 -16.5 -4.19817 | opp_overlap 4448880 GTGAGTGATCTAAAA GCTGGATGGCA TTG CGCCATCCAGC ATGATAATGCGGTTA cycA 4450308 - 4448896 - | D-alanine/D-serine/glycine permease TERM 5569 4451071 - 4451089 + H 83 -10.2 -3.75153 | opp_overlap 4451074, overlap 4451074 CGCGATGCACCACAT CAACCGGC ACA GCCGGATG TTTGCCTTCCAGCGC TERM 5570 4451074 - 4451086 + H 71 -10.5 -2.6732 | opp_overlap 4451074, overlap 4451071 GATGCACCACATCAA CCGGC ACA GCCGG ATGTTTGCCTTCCAG TERM 5571 4451086 - 4451074 - H 77 -10.5 -3.29947 | opp_overlap 4451074 4451071 GATGCACCACATCAA CCGGC ACA GCCGG ATGTTTGCCTTCCAG TERM 5572 4451921 - 4451891 - g 74 -7.4 -4.13014 | opp_overlap 4451882, overlap 4451892 4451901 GGCAGATGGTGAAAA TCCGCCAGAACGCC AGC GGCGTGGTGACGGG CTTAACCATTGATAC TERM 5573 4451920 - 4451892 - g 72 -10.9 -3.07487 | opp_overlap 4451882, overlap 4451891 4451901 GCAGATGGTGAAAAT CCGCCAGAACGCC AGC GGCGTGGTGACGG GCTTAACCATTGATA TERM 5574 4451968 - 4451981 + G 70 -3.7 -4.71426 | overlap 4451966 GTCCTGTTTACCCGC CAGCC GGAT GGCAG TTTTATTCGTGCGCG ytfB 4451419 - 4452000 + | hypothetical protein ytfA 4452310 - 4451984 - | hypothetical protein fabG 4452843 - 4453634 + | 3-ketoacyl-(acyl-carrier-protein) reductase S4549 4454966 - 4454463 - | IS1 orfB S4548 4453644 - 4454528 + | hypothetical protein S4550 4455160 - 4454885 - | IS1 orfA S4551 4455218 - 4456036 + | IS600 orfB S4552 4457129 - 4456077 - | transport of lysine/cadaverine S4553 4457304 - 4457579 + | IS1 orfA S4554 4457498 - 4458001 + | IS1 orfB TERM 5575 4458332 - 4458351 + T 90 -13.6 -3.31196 | opp_overlap 4458332 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG TERM 5576 4458351 - 4458332 - T 100 -13.6 -4.98531 | opp_overlap 4458332 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG TERM 5577 4458397 - 4458413 + T 73 -10.9 -2.62616 | opp_overlap 4458396 4458394 4458391 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4459121 - 4458546 - | putative transcriptional regulator dipZ 4460855 - 4459158 - | thiol:disulfide interchange protein precursor cutA 4461169 - 4460831 - | divalent-cation tolerance protein CutA TERM 5578 4461255 - 4461276 + r 80 -12.9 -2.56164 | opp_overlap 4461256, overlap 4461254 GTCGGCGGGAAAGAA AGCGGGGCG TGAA CGCCCCGCG ATTGATCATTACAGC TERM 5579 4461275 - 4461256 - R 100 -16.4 -4.41348 | opp_overlap 4461255 4461254 TCGGCGGGAAAGAAA GCGGGGCG TGAA CGCCCCGC GATTGATCATTACAG dcuA 4462586 - 4461285 - | anaerobic C4-dicarboxylate transporter TERM 5580 4462658 - 4462677 + r 100 -13.6 -5.73978 | opp_overlap 4462658 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTTTTTATTTGTACT TERM 5581 4462677 - 4462658 - R 100 -13.6 -5.55769 | opp_overlap 4462658 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTTTTTATTTGTACT aspA 4464185 - 4462704 - | aspartate ammonia-lyase TERM 5582 4463569 - 4463581 + g 74 -7.7 -4.13282 | overlap 4463560 ACTGCGTCCTGCAGC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 5583 4464004 - 4464019 + g 71 -2.6 -4.92757 | gap 1, opp_overlap 4464004, overlap 4463999 ATACCGCGAACAAAT TCAG-GA ATA TCACTGA TTTTGTTGTTGCTGA fxsA 4464477 - 4464953 + | FxsA TERM 5584 4464962 - 4464994 + T 78 -4.8 -5.0925 | opp_overlap 4464955 4464962 GGATTAATGTCGAAA CGCCGGATTATG TGGTTATGC CATTTTCCGGCG TTTTTCGTTTTGGCA yjeH 4466225 - 4464969 - | inner membrane protein YjeH TERM 5585 4466099 - 4466087 - G 77 -6.9 -4.56314 | opp_overlap 4466092, overlap 4466088 CTAAGATAATCAAAA CGGGC CAC GCCCA CAGGCTGTTATTGCC TERM 5586 4466190 - 4466204 + g 70 -7.1 -4.10744 | opp_overlap 4466180 TAGCAGGCCAATGCC CTGGG CCAGC CCCAG TTCTTGTTTGAGTCC groES 4466501 - 4466794 + | co-chaperonin GroES TERM 5587 4467214 - 4467204 - g 74 -8.2 -3.91897 | CGTGGTATCGACAAA GCGG TTA CCGC TGCAGTTGAAGAACT groEL 4466838 - 4468484 + | chaperonin GroEL TERM 5588 4468537 - 4468514 - f 84 -8 -4.83246 | opp_overlap 4468514 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA TERM 5589 4468514 - 4468537 + F 100 -12.4 -5.50723 | opp_overlap 4468514 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA yjeI 4468589 - 4468975 + | hypothetical protein yjeJ 4470047 - 4469178 - | hypothetical protein S4567 4470233 - 4470508 + | IS1 orfA S4568 4470427 - 4470930 + | IS1 orfB TERM 5590 4471219 - 4471240 + T 76 -7.9 -4.30978 | ATCAGTTACTGCTGG CGTAGCTGG AGAT CCAGCGGCG TTTTGCTGGGTTCGC yjeK 4472237 - 4471209 - | hypothetical protein efp 4472279 - 4472845 + | elongation factor P TERM 5591 4472850 - 4472881 + F 90 -13 -3.65046 | overlap 4472854 GCGTGAAGTAATGCG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCAGGTCAGAG TERM 5592 4472854 - 4472877 + F 86 -14.6 -2.66106 | overlap 4472850 GAAGTAATGCGGTTG TGGTGCGGCC TGCA GGCTGCACCA TCACTTATTCAGGTC TERM 5593 4473283 - 4473314 + F 91 -8 -5.26316 | opp_overlap 4473287, overlap 4473287 GCGCAGCAATAAGCA ATAACGGTACGACA GCAG TGTCGTGCCGTTTG TTTTTTCTGCGATCG TERM 5594 4473310 - 4473287 - f 87 -11 -3.90559 | opp_overlap 4473287 4473283 AGCAATAAGCAATAA CGGTACGACA GCAG TGTCGTGCCG TTTGTTTTTTCTGCG TERM 5595 4473287 - 4473310 + F 100 -13.2 -5.13354 | opp_overlap 4473287, overlap 4473283 AGCAATAAGCAATAA CGGTACGACA GCAG TGTCGTGCCG TTTGTTTTTTCTGCG sugE 4473305 - 4473772 + | suppresser of groEL blc 4474302 - 4473769 - | outer membrane lipoprotein Blc TERM 5596 4474380 - 4474363 - R 95 -11.3 -4.46581 | GAAAAGCGCAGAAAA GGTCCGA AAAT TCGGACC CGATGAAATTTTACT ampC 4475524 - 4474391 - | beta-lactamase TERM 5597 4475545 - 4475569 + r 93 -12.7 -3.75629 | opp_overlap 4475547, overlap 4475546 CTGGTTTCCATACAA AACGGCCCGCC ATA GGCGGGCCGGA TTTACATTGGCGATG TERM 5598 4475546 - 4475568 + r 93 -16.2 -2.85056 | opp_overlap 4475547, overlap 4475545 TGGTTTCCATACAAA ACGGCCCGCC ATA GGCGGGCCGG ATTTACATTGGCGAT TERM 5599 4475567 - 4475547 - R 100 -19.7 -4.52589 | opp_overlap 4475546 4475545 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCG GATTTACATTGGCGA frdD 4475946 - 4475587 - | fumarate reductase subunit D frdC 4476352 - 4475957 - | fumarate reductase subunit C frdB 4477097 - 4476363 - | fumarate reductase iron-sulfur subunit frdA 4478898 - 4477090 - | fumarate reductase flavoprotein subunit TERM 5600 4477901 - 4477926 + g 79 -2.6 -5.24129 | gap 1, overlap 4477903 GCTTTCGCCAGTTCG CAG-ATGAACG GCAGA CGTTCATGCAG TTTTTTCTCGCCGAG TERM 5601 4477990 - 4477962 - G 70 -7.3 -4.04206 | opp_overlap 4477963 4477965 4477986, overlap 4477965 4477967 GCAGGTCGAGATAAA CCACATCACCACG CGG CGTGGAGATGGTG TTGCCTTTACGCCAT TERM 5602 4477987 - 4477965 - G 75 -12 -3.06418 | opp_overlap 4477963 4477965 4477986, overlap 4477962 4477967 GGTCGAGATAAACCA CATCACCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 5603 4477965 - 4477987 + g 72 -12 -2.51888 | opp_overlap 4477965 4477962 4477967, overlap 4477963 4477986 GGTCGAGATAAACCA CATCACCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 5604 4480027 - 4480039 + G 70 -10.5 -2.71712 | overlap 4480026 CAAGATAACCGTAAG CGCGC GGC GCGCG GTTTGCCGCAGCACC yjeA 4479223 - 4480200 + | lysyl-tRNA synthetase TERM 5605 4480460 - 4480439 - T 79 -3 -5.34555 | opp_overlap 4480439 4480441 4480456, overlap 4480441 TCACACGATAAAAAA GATGAGTC TGATAG GACTCATA TTGATGATCTTTACT S4579 4481264 - 4480989 - | IS1 orfA TERM 5606 4481688 - 4481702 + r 78 -5.8 -4.91084 | ATTTAGTATTGCTGT TAGTAA GCA TTACTA TTTTGTTATTAAATG TERM 5607 4482704 - 4482665 - R 100 -14.5 -3.8647 | gap 1, opp_overlap 4482673 ACTGATCATATGAAA TCCTG-CAACTCATCGTC TCTCC GGCGATGAGTTGTCAGGA AGTAATGCGTATGGA TERM 5608 4482673 - 4482695 + r 71 -9.9 -3.2963 | opp_overlap 4482665 TATGAAATCCTGCAA CTCATCGTC TCTCC GGCGATGAG TTGTCAGGAAGTAAT TERM 5609 4482761 - 4482796 + r 74 -10.6 -3.21912 | gap 1, opp_overlap 4482755 4482773 TGAAGATGATGTTAA GCTGCTAAATGA-GCCA CGT TGACATCATTTGGCAGC TTCATGCATTACAAA yjeP 4486116 - 4482805 - | hypothetical protein TERM 5610 4483311 - 4483332 + g 72 -5.7 -4.56775 | GATCGCGGATCGTTA CCGTATCGC CAAT GCGAATCGG TTTTTCGAACAGGAT psd 4487106 - 4486138 - | phosphatidylserine decarboxylase yjeQ 4488255 - 4487203 - | ribosome-associated GTPase TERM 5611 4487727 - 4487767 + g 74 -11.1 -3.19509 | overlap 4487716 4487725 4487723 4487721 4487728 TGCGGTAGATATCCA TCTGCTCGTTGACGAACGC CAT GCCTTCGTCGTCCAGCAGG TCTATCTTGTTGAGC TERM 5612 4487728 - 4487766 + g 76 -12.4 -2.51223 | overlap 4487716 4487727 4487725 4487723 4487721 GCGGTAGATATCCAT CTGCTCGTTGACGAACGC CAT GCCTTCGTCGTCCAGCAG GTCTATCTTGTTGAG yjeR 4488350 - 4488895 + | oligoribonuclease TERM 5613 4489017 - 4488997 - Tf 80 -5.5 -4.9792 | overlap 4488999 CACTTGAGATAAAAA CGCAAAAAA AAC TTTTTTGGG GGGTTGCAGAGGGAA TERM 5614 4489148 - 4489132 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5615 4489206 - 4489193 - Tf 72 -6.7 -4.28049 | TCCAAAATTTGAAAA GTGCT GCAA AGCAC AGACCACCCAATCGC TERM 5616 4489381 - 4489365 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5617 4489492 - 4489476 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5618 4489603 - 4489587 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5619 4489826 - 4489848 + TF 76 -4.9 -4.78753 | overlap 4489828 4489844 AATCAAGATTCCGTT TTGTCGAGT CGATC ACTTGACGA TTTTATTCGTCTTGA yjeS 4491045 - 4489906 - | hypothetical protein TERM 5620 4490752 - 4490738 - Gf 73 -10 -3.32844 | opp_overlap 4490737 4490736 CGGCCCAGCGCATAA CGGCTA ACA TAGCCG AGTTTGGGGTTTTTC TERM 5621 4491587 - 4491573 - gH 72 -9.2 -3.53012 | GCCTGCTGGCTGAAA CCGGCG CTA CGCCAG GCGCAGTGATCAACG yjeF 4491044 - 4492591 + | hypothetical protein yjeE 4492563 - 4493024 + | putative ATPase TERM 5622 4493367 - 4493357 - g 72 -6.8 -4.1899 | CGATCTTACCGAAAA CGGT AAA ACCG AAGCGGTGAAGCGGC amiB 4493043 - 4494380 + | N-acetylmuramoyl-l-alanine amidase II TERM 5623 4494612 - 4494585 - g 83 -5.4 -5.14563 | overlap 4494588 TGCGGTATCAAAAAA GATGAGCTGGCG CTGG CGCTGGCTCGTC ATGCCACCAGTAAAA TERM 5624 4495461 - 4495451 - g 77 -8.2 -4.09685 | opp_overlap 4495455 TGCCATCCCGGAAAA CCGC GTG GCGG CGGGGCGCAATCACT TERM 5625 4495677 - 4495641 - g 72 -4.9 -4.65895 | overlap 4495647 4495648 GCGCCGATGCAAAAA CCAAAAGCGCCGGAACC GCA GGAACCTGCACTTGCGG CGAACAGTCAGAGTT TERM 5626 4495680 - 4495647 - g 85 -7.3 -4.78661 | overlap 4495641 4495648 ATGCAAAAACCAAAA GCGCCGGAACCGCAG GAAC CTGCACTTGCGGCGA ACAGTCAGAGTTTTG TERM 5627 4495679 - 4495648 - g 78 -10.8 -3.4557 | overlap 4495641 4495647 TGCAAAAACCAAAAG CGCCGGAACCGCAG GAAC CTGCACTTGCGGCG AACAGTCAGAGTTTT TERM 5628 4495810 - 4495824 + G 71 -9.2 -3.53012 | AGGCACAATTGACGC CGGGTG AAG CGCCCG TTTGCGCCCAGCCGC TERM 5629 4495908 - 4495896 - g 74 -3.3 -4.91109 | TCGGCATTAGAAAAA GCGCA GTC TGCCC TAGCGGAATTGGGTA mutL 4494390 - 4496237 + | DNA mismatch repair protein miaA 4496230 - 4497180 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 5630 4497294 - 4497321 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4497293 4497290, overlap 4497287 AATCTTTACAAGATC CGTTCCTGAACGC ACT GCGT-CGGGAACG TGTTCCAGTTTCTAT TERM 5631 4497497 - 4497487 - g 72 -8.2 -3.78778 | overlap 4497488 TCATCACAGTAACAA CGCC GGT GGCG GTACCAGCAGTAACT hfq 4497266 - 4497574 + | RNA-binding protein Hfq TERM 5632 4498543 - 4498531 - g 71 -3.3 -4.77165 | GCGTGTACAAGAAAA CATCG AAG CGGTG AATACGGTTCTTGAA TERM 5633 4498694 - 4498658 - g 90 -9.5 -4.4768 | overlap 4498654 GACGAAGAGAACAAA CCGATCCGTGTCTG-GC TTTCC GCACAGAC-CGGAGCGG GGATACCACAGCTTT hflX 4497650 - 4498930 + | putative GTPase HflX TERM 5634 4499333 - 4499322 - g 70 -7.2 -4.03811 | opp_overlap 4499332 TATACCATTAAAGAA GCCG AACG CGGC GTGGTAACACGCTTT TERM 5635 4500028 - 4500015 - g 75 -5.3 -4.69664 | GAGACGATGGAAAAA GTGTT GGGT AACAC CCGCAAAGTGCTGGT TERM 5636 4500247 - 4500228 - g 81 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC CAAC GCGCAGCG TAACGACTACCAGCG hflK 4499016 - 4500275 + | FtsH protease regulator HflK hflC 4500278 - 4501282 + | FtsH protease regulator HflC TERM 5637 4501339 - 4501311 - f 87 -9.6 -4.19678 | gap 1, opp_overlap 4501312, overlap 4501312 GTACAGGTCAATAAA GCCACCG-CATCC TCAG GGATGTCGGTGGT TTTCTTTTTCTATAA TERM 5638 4501312 - 4501338 + F 100 -13.1 -5.38839 | gap 1, opp_overlap 4501311 4501312 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA TERM 5639 4501338 - 4501312 - f 82 -13.1 -3.11325 | gap 1, opp_overlap 4501312, overlap 4501311 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA yjeT 4501364 - 4501561 + | hypothetical protein TERM 5640 4502035 - 4502025 - g 74 -8.2 -3.86194 | overlap 4502012 4502026 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 5641 4502180 - 4502148 - g 72 -5.6 -4.56775 | opp_overlap 4502148 4502170, overlap 4502171 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4501665 - 4502963 + | adenylosuccinate synthetase TERM 5642 4503367 - 4503353 - g 74 -2.7 -5.00616 | overlap 4503354 TGTTCGTGGAAAAAA TGGCG GCATT CGCCT GGGTAAACCGGCGAG yjeB 4503168 - 4503593 + | transcriptional repressor NsrR TERM 5643 4503755 - 4503731 - g 75 -5.7 -4.71482 | gap 1, overlap 4503732 ACCAAACGTGAAAAA CCGGCCAGCC GTGATG AGCTGGC-GG TAGAACTGCACATTG TERM 5644 4505970 - 4505959 - g 70 -7.2 -4.08806 | TGAGAAAAAAACGAA GCCG AAAG CGGC GAAGAAAGACGCGAG vacB 4503632 - 4506073 + | exoribonuclease R TERM 5645 4506372 - 4506397 + G 76 -10.5 -3.36492 | gap 1, overlap 4506373 TCTGTTACCGCTGAT TCACGCCCTTGA GTC TCA-GGGCGTGG TTATCCAGTTGGCAA TERM 5646 4506373 - 4506396 + G 73 -11.8 -2.61681 | gap 1, overlap 4506372 CTGTTACCGCTGATT CACGCCCTTGA GTC TCA-GGGCGTG GTTATCCAGTTGGCA TERM 5647 4506467 - 4506437 - g 74 -6 -4.4648 | opp_overlap 4506444 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC CCGCGTGAAGCCAGG yjfH 4506253 - 4506984 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 5648 4507023 - 4507004 - f 72 -6.4 -4.3534 | opp_overlap 4507005, overlap 4507005 TCTGAATTATGAAAA GCCATCCA GATT TGGATGGT TTTTTTGGTAATGCT TERM 5649 4507005 - 4507022 + F 100 -9.9 -5.55664 | opp_overlap 4507004 4507005 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTGGTAATGC TERM 5650 4507022 - 4507005 - f 71 -9.9 -3.20722 | opp_overlap 4507005, overlap 4507004 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTGGTAATGC S4604 4507085 - 4507360 + | IS1 orfA S4605 4507279 - 4507782 + | IS1 orfB TERM 5651 4507987 - 4508009 + F 74 -5.5 -4.57341 | gap 1, overlap 4507989 4508000 AGGAATGTTTATGGG AACCGCC-GC GCTG GCTGGCGGTA TTTTTAACGCAGCTT TERM 5652 4507989 - 4508007 + F 74 -8.1 -3.90048 | gap 1, overlap 4507987 4508000 GAATGTTTATGGGAA CCGCC-GC GCTG GCTGGCGG TATTTTTAACGCAGC TERM 5653 4508182 - 4508193 + G 79 -2.2 -5.27779 | gap 1, overlap 4508182 AACGTTGGCGCTAAT G-GGC GGT GCCGC TTTTTTCGTATTGAA TERM 5654 4508595 - 4508585 - g 80 -5.4 -5.00616 | GGTTCTGGCAAAAAA GAGT CTT ACTC TTCAGGCGGCTTTAC yjfM 4508048 - 4508686 + | hypothetical protein TERM 5655 4509051 - 4509074 + G 74 -8.2 -3.95036 | gap 1, opp_overlap 4509042 GTACAACGCCGATAC GCCGACCTCGT TGT ATGA-GTCGGC TTATTTCCAGTGGTT TERM 5656 4509189 - 4509201 + G 82 -3.4 -5.3104 | CTTTAGTGAGCTTTA CAGT CGGGA ACTG TTTTATTTTTGCTGC yjfC 4508689 - 4509852 + | putative synthetase/amidase TERM 5657 4509921 - 4509884 - T 90 -14.3 -3.14132 | opp_overlap 4509888 TCTTTCTGTCATGAA TCCATGGCAGTGACCAT ACTA ATGGTGACTGCCATTGA TGGAGGGAGACACAG TERM 5658 4509888 - 4509917 + T 86 -13.7 -3.14132 | opp_overlap 4509884 TCTGTCATGAATCCA TGGCAGTGACCAT ACTA ATGGTGACTGCCA TTGATGGAGGGAGAC TERM 5659 4510282 - 4510294 + T 93 -10.5 -4.68724 | overlap 4510263 CCGGCGCATTTGTGG CGCGC GCG GCGCG TTTTATGTTACATGC TERM 5660 4510616 - 4510646 + T 100 -9.7 -5.24129 | gap 1 CGATGCGCATCTGGT GCTGGCGCAGACCG CGGG CGGTCTGT-CCTGC TTTTTTGTGCCGCGC TERM 5661 4511056 - 4511046 - T 74 -8.2 -3.9392 | opp_overlap 4511045 GCCGATGCCAAAGAA GCCC TGT GGGC GCGTTTATTTACGCC S4610 4511738 - 4511235 - | IS1 orfB S4611 4511932 - 4511657 - | IS1 orfA yjfN 4512757 - 4512455 - | hypothetical protein TERM 5662 4512699 - 4512741 + g 76 -3.5 -4.98531 | gap 1 GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA yjfO 4513208 - 4512879 - | hypothetical protein yjfP 4513390 - 4514139 + | esterase yjfQ 4514891 - 4514136 - | transcriptional repressor UlaR TERM 5663 4514990 - 4514949 - R 90 -13.1 -3.47762 | overlap 4514947 4514950 AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTTC TCCACGCTATCCGGTATAA ACGACAGATTACAGG TERM 5664 4514989 - 4514950 - R 86 -14.4 -2.67934 | overlap 4514949 4514947 ATAGCCAGGAAATAC TACGCCGGATAGCGCGAA CTTC TCCACGCTATCCGGTATA AACGACAGATTACAG yjfR 4516069 - 4514999 - | putative L-ascorbate 6-phosphate lactonase ulaA 4516418 - 4517815 + | ascorbate-specific PTS system enzyme IIC sgaB 4517831 - 4518136 + | L-ascorbate-specific enzyme IIB component of PTS ptxA 4518146 - 4518610 + | L-ascorbate-specific enzyme IIA component of PTS TERM 5665 4518811 - 4518777 - g 73 -9.3 -3.59979 | gap 1 GTTCGCGATCTGAAA GCGCTCTACCCGCACA AAAT CGTGCTGGCAGA-CGC CAAAATTGCCGATGC ulaD 4518624 - 4519274 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 5666 4519343 - 4519323 - g 100 -12.5 -4.7497 | GGCATCTATGAAAAA GCGCTCCCC GCC GGGGAGTGC TGGCTGGAACGCCTG sgaU 4519284 - 4520138 + | L-xylulose 5-phosphate 3-epimerase sgaE 4520138 - 4520824 + | L-ribulose-5-phosphate 4-epimerase TERM 5667 4520912 - 4520895 - T 100 -12.7 -5.40072 | CGTTTTTCAAAAAAA GCCCCCT GCGA AGGGGGC AAAGCAAACTATGGC yjfY 4521228 - 4520953 - | hypothetical protein TERM 5668 4521031 - 4521043 + g 71 -9.1 -3.46435 | overlap 4521029 4521028 TACGTGGTAGTACGT TGCGC CTT GCGCA TCTGTTTCTTCATTT rpsF 4521555 - 4521950 + | 30S ribosomal protein S6 priB 4521957 - 4522271 + | primosomal replication protein N rpsR 4522276 - 4522503 + | 30S ribosomal protein S18 rplI 4522545 - 4522994 + | 50S ribosomal protein L9 TERM 5669 4523008 - 4523050 + F 84 -8.4 -4.7254 | opp_overlap 4522996 4523020, overlap 4523015 4523020 AATTCGTTATTCAAC GAGACGTAAAAACGCCGACC ATT GGTCGGCGTTTTGCTTTCTA TTTTTCGTCAGGCAT TERM 5670 4523015 - 4523043 + F 100 -16.1 -3.33352 | opp_overlap 4523020, overlap 4523008 4523020 TATTCAACGAGACGT AAAAACGCCGACC ATT GGTCGGCGTTTTG CTTTCTATTTTTCGT TERM 5671 4523038 - 4523020 - f 100 -16 -4.72333 | opp_overlap 4523015 4523008 4523020 AACGAGACGTAAAAA CGCCGACC ATT GGTCGGCG TTTTGCTTTCTATTT TERM 5672 4523020 - 4523038 + F 100 -16 -4.68919 | opp_overlap 4523020, overlap 4523015 4523008 AACGAGACGTAAAAA CGCCGACC ATT GGTCGGCG TTTTGCTTTCTATTT S4629 4523692 - 4523970 + | ISEhe3 orfA S4630 4524027 - 4524608 + | ISEhe3 orfB S4631 4525362 - 4524649 - | IS600 orfB S4632 4525805 - 4525503 - | IS600 orfA S4633 4525870 - 4526190 + | hypothetical protein TERM 5673 4526230 - 4526203 - T 86 -12 -3.62522 | opp_overlap 4526202, overlap 4526205 TAACGCGGCGAATAA TACCCGGTAGCA CTGG CGCTACCGGGTC AATGTATCAGGCGAC TERM 5674 4526228 - 4526205 - T 93 -14.6 -3.38991 | opp_overlap 4526202, overlap 4526203 ACGCGGCGAATAATA CCCGGTAGCA CTGG CGCTACCGGG TCAATGTATCAGGCG TERM 5675 4526748 - 4526779 + T 91 -11 -4.36914 | opp_overlap 4526756, overlap 4526752 4526756 TAAATTTTGGTGATG TGAATAAAGCGGCT ATTT AGCCGCTTTATTGG TTTTGTGAGGGCGAG TERM 5676 4526752 - 4526775 + T 100 -14 -3.75115 | opp_overlap 4526756, overlap 4526748 4526756 TTTTGGTGATGTGAA TAAAGCGGCT ATTT AGCCGCTTTA TTGGTTTTGTGAGGG TERM 5677 4526771 - 4526756 - T 87 -10.4 -4.1822 | opp_overlap 4526752 4526748 4526756 GGTGATGTGAATAAA GCGGCT ATTT AGCCGC TTTATTGGTTTTGTG TERM 5678 4526756 - 4526771 + T 93 -10.4 -4.48176 | opp_overlap 4526756, overlap 4526752 4526748 GGTGATGTGAATAAA GCGGCT ATTT AGCCGC TTTATTGGTTTTGTG S4635 4528454 - 4526799 - | hypothetical protein TERM 5679 4526969 - 4526989 + g 82 -3.3 -5.31072 | TAATATTGTAAAAAC TGTCAGAAT TAA GTTTTGGCA TTTTTATTCTGTTCT TERM 5680 4529607 - 4529624 + H 71 -3.3 -4.87665 | overlap 4529608 CTGAACGCCTGCTTC ACCACGT AGCC GCGTGGG TTTTTATCGATAGGC TERM 5681 4529979 - 4529942 - H 82 -7 -4.7373 | overlap 4529945 4529946 GTATTCCATGAAAAA CAAGGCCTTCTGCAAC ATGATG GTTGCAGAAGGCGCAA AAGAGAGTTGTTAAG TERM 5682 4529976 - 4529945 - H 100 -13.1 -4.47707 | overlap 4529942 4529946 TTCCATGAAAAACAA GGCCTTCTGCAAC ATGATG GTTGCAGAAGGCG CAAAAGAGAGTTGTT TERM 5683 4529975 - 4529946 - H 100 -16.6 -3.27901 | overlap 4529945 4529942 TCCATGAAAAACAAG GCCTTCTGCAAC ATGATG GTTGCAGAAGGC GCAAAAGAGAGTTGT TERM 5684 4531860 - 4531881 + H 82 -7.3 -4.79174 | AGAACGCGGTTTTGC CCGTTGGAG ACGG CTTCAATGG TTTTGTTGATTGCCT S4638 4532719 - 4532994 + | IS1 orfA S4639 4532913 - 4533416 + | IS1 orfB TERM 5685 4533500 - 4533490 - T 78 -5.4 -4.8083 | CAATACGACGAAAAA TAGC ATC GCTA AGTAATTTAGGGGTA TERM 5686 4534237 - 4534204 - T 76 -9 -3.74077 | gap 1 TCTGACATATCTAAA GAGTTCCACTCGTAA TAATG TTGCG-GTGGAACTC TCAAAAAGTTGATCT yjiA 4535116 - 4534262 - | putative GTP-binding protein YjiA yjiX 4535432 - 4535229 - | hypothetical protein TERM 5687 4535472 - 4535455 - R 100 -14.1 -4.51812 | TCTGATAAGAACAAA GCCCCGC CGAA GCGGGGC TAAACACGGTTAGTG yjiY 4537647 - 4535482 - | putative carbon starvation protein TERM 5688 4538019 - 4537991 - R 100 -9.6 -5.2291 | gap 1, overlap 4537992 AGATCACAATAAAAA TGCCCCTTCGACG AATG CGT-GAAGGGGCT GGAGCTTAAATCGCA TERM 5689 4538018 - 4537992 - R 95 -13.1 -3.72119 | gap 1, overlap 4537991 GATCACAATAAAAAT GCCCCTTCGACG AATG CGT-GAAGGGGC TGGAGCTTAAATCGC hpaC 4538537 - 4538025 - | component C of the 4HPA-hydroxylase TERM 5690 4540330 - 4540305 - R 76 -11.9 -2.62144 | overlap 4540304 GGCAAATCATAATAT TCCCCGCTAAC AAGG GCTAACGGGGA CGGAATTTTTTATGG S4646 4541133 - 4540366 - | hypothetical protein TERM 5691 4541313 - 4541301 - R 71 -7.7 -3.87815 | opp_overlap 4541312 TCTCAGGTTGATAAA TGGTC AGC GACCA CGGAATTGTGTTGGT hpaA 4542194 - 4541304 - | putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein hpaX 4543559 - 4542204 - | putative 4-hydroxyphenylacetate permease hpaI 4544384 - 4543581 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 5692 4543675 - 4543638 - G 76 -9.1 -3.82433 | gap 1, opp_overlap 4543638 AGAACTATTACCAAA CCGTGCT-GCCAGCGC TTCGGCG GCGCGGGCGAGCAGGG TGGTGTCAACGCCGA hpaH 4545198 - 4544395 - | 2-oxo-hept-3-ene-1, 7-dioate hydratase TERM 5693 4544582 - 4544597 + g 70 -6 -4.20516 | opp_overlap 4544582, overlap 4544586 GGATGATTCAGCACA CCAGCG GCGA CGCCGG TTTCTTCAATCACGC TERM 5694 4545121 - 4545141 + g 80 -5.4 -4.88736 | gap 1, overlap 4545110 4545118 4545122 GTAATCCAGCGAGAT C-GCGCGGA TCTG TTCGCGCTG TTTTTCTGCCTGATC TERM 5695 4545122 - 4545139 + g 81 -9.1 -4.06182 | overlap 4545110 4545118 4545121 TAATCCAGCGAGATC GCGCGGA TCTG TTCGCGC TGTTTTTCTGCCTGA TERM 5696 4545212 - 4545235 + r 77 -10.2 -3.4072 | ATAGCGATATCCTGT GGCATTGCCG GATG CGGCAGCGCC TTATCATCCGGCCTG hpaF 4545646 - 4545266 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpaD 4546507 - 4545656 - | homoprotocatechuate dyoxygenase TERM 5697 4545969 - 4545950 - G 82 -9.2 -4.16842 | overlap 4545966 CTGATCGTCAATAAA GCGGTGCG ATAA CGAACCGC TGGCAAGGACCGCCA hpaE 4547975 - 4546509 - | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase hpaG 4549261 - 4547972 - | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase TERM 5698 4549286 - 4549311 + H 72 -4.9 -4.65747 | overlap 4549282 4549287 4549290 TCGGATTCGATCATC TTAATCATTAA TATG TTAATGATTAC TTTTATTCCCGATTG TERM 5699 4549785 - 4549769 - g 72 -8.7 -3.72695 | overlap 4549778 AGTGTTGCGATTAAA GCCGATC AAT GATCAGC GGAAGCTCTATATCT hpcR 4549533 - 4549979 + | regulator of the 4HPA-hydroxylase operon TERM 5700 4549998 - 4550008 + F 80 -6.8 -4.67353 | opp_overlap 4549998 TTTAGTATCTGATAA CCAG CGC CTGG TTTTTCCATGGATGG TERM 5701 4550034 - 4550045 + F 72 -3 -4.98531 | GATGGCGGGTTACAC CTTT TCAT AAAG TTTTTGCTTTCCAGG TERM 5702 4550123 - 4550137 + G 72 -7.1 -4.20883 | GTATCAAGATCGTGA CCAGC TTACT GCTGG TTTTGGCCGTTTTTG TERM 5703 4550171 - 4550181 + G 82 -3.2 -5.18357 | TTTTACAACTGACAT CAGG CGG TCTG TTTTTTAATGCCTTA TERM 5704 4550448 - 4550409 - g 91 -5.6 -5.42862 | gap 1, opp_overlap 4550443, overlap 4550425 4550426 ACAGGCGGAAAAAAA CTG-GGCGGATTACGAAGC GTT GCCGCGTGACCCGCGTCAG AGCACCGCCGCAGCG TERM 5705 4551197 - 4551179 - g 70 -5.2 -4.37886 | opp_overlap 4551180, overlap 4551180 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATTGACGGCATTAC tsr 4550098 - 4551762 + | methyl-accepting chemotaxis protein I, serine sensor receptor TERM 5706 4551802 - 4551775 - T 100 -12.2 -4.8543 | gap 1 TAATCGCCATAAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAGGGAGTTTAATCT yjiZ 4553172 - 4551811 - | putative transport protein yjjM 4554193 - 4553387 - | hypothetical protein TERM 5707 4554028 - 4554038 + g 70 -4 -4.69656 | TGAAAAAAGCCTGCT CAAA CAC TTTG TTTTGTTCACTCATT TERM 5708 4555490 - 4555516 + r 100 -5.8 -6.32017 | opp_overlap 4555481 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTTGTTTCTT TERM 5709 4555590 - 4555556 - R 100 -15.8 -3.33261 | TTGTAAGCCGGAGAA GGCGTGTAGGTCGCAC CCT ATGCGACCTACACATC AGTCAGGAATTACCC mdoB 4557891 - 4555600 - | phosphoglycerol transferase I TERM 5710 4556887 - 4556873 - G 72 -5.7 -4.52589 | GTGCGCGAGATAAAA CCATC CGGGT GATGG GTATCGACTGTCAGG yjjA 4558642 - 4558145 - | hypothetical protein dnaC 4559425 - 4558688 - | DNA replication protein DnaC TERM 5711 4559303 - 4559317 + g 72 -7 -4.15703 | ACGTTCGAGAGCGGC GGAGCG GAT CGCCCC TTGTTCTTTCTGCCA dnaT 4559967 - 4559428 - | primosomal protein I TERM 5712 4559524 - 4559538 + g 77 -2.7 -5.07486 | GGCACGACCGATTTG CAGGC TGCGC GCCAG TTTTTGTTGCCACTG TERM 5713 4560057 - 4560022 - R 83 -13.4 -3.26947 | opp_overlap 4560024 4560026 4560056 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTAAGCGAGGCAAT TERM 5714 4560024 - 4560055 + r 73 -10.9 -2.70932 | opp_overlap 4560022, overlap 4560026 ACTTTTATAGTAACA CACGGAGGAGAGG AGGCTG TCTCTCATCCGTG TGCTTAAGCGAGGCA yjjB 4560400 - 4560074 - | hypothetical protein TERM 5715 4561268 - 4561258 - H 72 -5.4 -4.43397 | TTGCAAAAGAAATAA TCCA CAC TGGA TACAAAGCCGCGTTA TERM 5716 4561287 - 4561275 - H 71 -6.9 -4.05747 | CACACTGGATACAAA GCCGC GTT ACGGC TCGCTGTTGCTCAGT S4666 4561932 - 4562207 + | IS1 orfA S4667 4562126 - 4562629 + | IS1 orfB TERM 5717 4563077 - 4563059 - f 81 -3.9 -5.41143 | gap 1 CAGCGCCCAAAAAAA CAGTGCGA TGCG TCG-ACTG GCAATTCACAGCAAC bglJ 4563227 - 4563850 + | DNA-binding transcriptional activator BglJ fhuF 4564676 - 4563888 - | ferric iron reductase involved in ferric hydroximate transport TERM 5718 4564206 - 4564226 + g 73 -11.9 -2.80922 | overlap 4564204 4564202 4564208 GCTGATTAACGTTTC CATTCGCTG CTG CGGCGAATG TGGTGTTGCGTTTTT rsmC 4566722 - 4565691 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 5719 4567067 - 4567051 - gH 79 -2.2 -5.26316 | overlap 4567052 TGACGCCAGAAAAAA TCGCGA TGCTG CCGCAA GGCAGTCGCTGCAAC holD 4566825 - 4567238 + | DNA polymerase III subunit psi rimI 4567207 - 4567653 + | ribosomal-protein-alanine N-acetyltransferase yjjG 4567668 - 4568345 + | nucleotidase prfC 4568436 - 4570025 + | peptide chain release factor 3 TERM 5720 4570036 - 4570061 + F 86 -14.7 -2.68338 | overlap 4570034 4570033 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTCCCTTCCT osmY 4570418 - 4571023 + | periplasmic protein TERM 5721 4571333 - 4571351 + F 100 -14.6 -4.28049 | opp_overlap 4571333 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 5722 4571351 - 4571333 - f 100 -14.6 -3.67989 | opp_overlap 4571333 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 5723 4571790 - 4571800 + G 74 -8.2 -3.90744 | opp_overlap 4571788 CGTTGCAAATGGATA CCGC CGC GCGG TTGTTTGACAGCGGC yjjU 4571423 - 4572496 + | hypothetical protein yjjV 4572637 - 4573275 + | hypothetical protein TERM 5724 4573449 - 4573417 - T 76 -12 -2.57344 | opp_overlap 4573383 4573382 4573426, overlap 4573383 4573416 CAGTTGGCGCACAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAAGTCTGTGCC yjjW 4574352 - 4573489 - | putative activating enzyme TERM 5725 4574299 - 4574275 - GT 78 -6.4 -4.57569 | gap 1, overlap 4574277 GCAGCCCTGCAAAAA CAGAGCCAGAC GACT GCCTGGCCC-G TCAACGCAGGAGAAG TERM 5726 4574298 - 4574277 - GT 81 -10.1 -3.90316 | overlap 4574275 AGCCCTGCAAAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA yjjI 4575865 - 4574324 - | hypothetical protein TERM 5727 4576732 - 4576712 - g 88 -5.3 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCGGCGG GCGGCGTGCGTACTG deoC 4576123 - 4576902 + | deoxyribose-phosphate aldolase TERM 5728 4577483 - 4577525 + G 72 -8.5 -3.85698 | gap 1, overlap 4577472 AAGACGTCGGCGTGG CGATTATCGGTCAGA-CCAG TTCA CTGGCTCCGGCTGATAAACG TTTCTACGCGACCCG deoA 4577029 - 4578351 + | thymidine phosphorylase deoB 4578404 - 4579627 + | phosphopentomutase TERM 5729 4579636 - 4579655 + F 93 -10.7 -4.38927 | GTTCTGATGGATTTG GGCGGAG CGTTGA CTCCGCC TTTGTTATGTCACAA deoD 4579684 - 4580403 + | purine nucleoside phosphorylase TERM 5730 4580437 - 4580460 + T 100 -12.4 -4.87037 | CGATTGTCGTGTTAA GCCGGAGTGG GGGA CTGCTCCGGC TTTTTAGTATCTATT S4688 4580827 - 4580564 - | hypothetical protein smp 4582546 - 4581902 - | hypothetical protein serB 4582652 - 4583620 + | phosphoserine phosphatase TERM 5731 4584458 - 4584445 - g 80 -5.2 -4.88067 | ACGCAGCCATAAAAA CCGC TTCGGC GCGG TGAATGAGCTGGGCG sms 4583669 - 4585051 + | DNA repair protein RadA TERM 5732 4585220 - 4585196 - g 72 -5 -4.67641 | gap 1, overlap 4585197 ATGCCAAAATTAAAA GCC-CCAGC GCGCAAAA GCTGGAGGC ATTGCACCGTTTTTT TERM 5733 4585974 - 4585989 + G 70 -6.1 -4.15222 | opp_overlap 4585974 4585972 4585975 TTTTGCAGTGAAATA CGCCA ATAAAG TGGCG TTTATTGACACCGAT nadR 4585072 - 4586304 + | nicotinamide-nucleotide adenylyltransferase TERM 5734 4586428 - 4586407 - T 72 -2.9 -5.03145 | gap 1, overlap 4586395 4586409 CAAGGTTTGAAAAAA CCTGCACGGG TGA CCCGC-CACG AAATTGAGGATGCTA TERM 5735 4586494 - 4586538 + T 73 -7.8 -4.11371 | opp_overlap 4586466 4586465, overlap 4586466 ATCCGGCATTCGGTG CTCAATGCCTGATGCGACGC TTACC GCGTCTTATCAGGCCTACAG TTTTACAACGTATTG TERM 5736 4586571 - 4586602 + T 83 -10 -4.15508 | opp_overlap 4586581, overlap 4586572 ATTGCTGGTTTTGTA GGCCGGATAAGGCG TTCG CGCCGCATCCGGCA TTTTACGCATTACTT TERM 5737 4586572 - 4586601 + T 82 -13.5 -3.08581 | opp_overlap 4586581, overlap 4586571 TTGCTGGTTTTGTAG GCCGGATAAGGCG TTCG CGCCGCATCCGGC ATTTTACGCATTACT yjjK 4588279 - 4586612 - | putative ABC transporter ATP-binding protein TERM 5738 4586662 - 4586674 + g 90 -4.7 -5.36965 | overlap 4586653 GCTCCAGCGCGTCTG CGCCC AGC GTGCG TTTTTTGTACTCTTC slt 4588490 - 4590427 + | lytic murein transglycosylase TERM 5739 4590559 - 4590578 + G 72 -6.4 -4.3898 | opp_overlap 4590558 4590559 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 4590517 - 4590843 + | Trp operon repressor TERM 5740 4591282 - 4591297 + F 72 -8.2 -3.76224 | TTTGCTACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA gpmB 4591500 - 4592147 + | phosphoglycerate mutase rob 4593013 - 4592144 - | right origin-binding protein TERM 5741 4593670 - 4593658 - g 74 -6.2 -4.56775 | opp_overlap 4593658 4593657 AGGTTCGCCGAAAAA CGCG ATTAG CGCG GTTCCTGTCATGCCG creA 4593224 - 4593697 + | hypothetical protein creB 4593710 - 4594399 + | DNA-binding response regulator CreB creC 4594399 - 4595823 + | sensory histidine kinase CreC TERM 5742 4596555 - 4596569 + G 77 -2.8 -5.13521 | opp_overlap 4596555 GACCTTAACCAGCAA CTGG CCGCATC CCAG TTTTTTAGGTGATTT creD 4595881 - 4597233 + | hypothetical protein TERM 5743 4597273 - 4597244 - T 100 -13.7 -4.64144 | opp_overlap 4597250, overlap 4597250 AATAAGGTTGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTT TGACGGTGGTAAAGC TERM 5744 4597250 - 4597267 + T 100 -12.7 -5.42259 | opp_overlap 4597244 4597250 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTGACGGTGG TERM 5745 4597267 - 4597250 - T 100 -12.7 -5.61881 | opp_overlap 4597250, overlap 4597244 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTGACGGTGG arcA 4598008 - 4597292 - | two-component response regulator TERM 5746 4597517 - 4597529 + g 71 -9.1 -3.44051 | opp_overlap 4597504 CATGGCGCGGAACTC GCTGC GCG GCAGC TTGTACTGCTCGCCA yjjY 4598104 - 4598244 + | hypothetical protein lasT 4598644 - 4599330 + | putative RNA methyltransferase