TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.47735 %AT, 3943281 nt, 34445 terms. Intergenic: 0.545417 %AT, H2T: 770459 nt, 6363 terms; T2T: 236896 nt, 4579 terms; H2H: 271087 nt, 3914 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|74310614|ref|NC_007384.1| Shigella sonnei Ss046, complete genome (length 4825265) thrL 190 - 255 + | thr operon leader peptide TERM 1 312 - 269 - f 100 -14 -3.83502 | opp_overlap 280, overlap 280 GACGCGTACAGGAAA CACAGAAAAAAGCCCGCACC TGAC AGTGCGGGCTTTTTTTTTCG ACCAAAGGTAACGAG TERM 2 280 - 301 + F 100 -13 -6.06723 | opp_overlap 269 280 GAAACACAGAAAAAA GCCCGCAC CTGACA GTGCGGGC TTTTTTTTTCGACCA TERM 3 301 - 280 - f 100 -13.7 -5.51046 | opp_overlap 280, overlap 269 GAAACACAGAAAAAA GCCCGCACC TGAC AGTGCGGGC TTTTTTTTTCGACCA TERM 4 655 - 643 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTAG TERM 5 2668 - 2655 - g 73 -3.7 -4.81249 | overlap 2656 GTTCAAAGTGAAAAA TGGCG AAAA CGCCC TGGCCTTTTATAGCC thrA 337 - 2799 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2801 - 3733 + | homoserine kinase TERM 6 4450 - 4421 - g 81 -12.9 -2.72661 | gap 1, opp_overlap 4418 TACTACTTTGAAGCA GTTGCGCAGCTGCC GCA GGAAGC-GCGCAAC CAGCTGGTTGTCTCG thrC 3734 - 5020 + | threonine synthase TERM 7 5044 - 5070 + F 91 -8 -5.24129 | gap 1, opp_overlap 5043 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA SSON_0005 5234 - 5530 + | hypothetical protein TERM 8 5558 - 5539 - T 73 -7.8 -4.13654 | overlap 5552 CCGCTAAATGACAAA TGCCGGGT AACA ATCCGGCA TTCAGCGCCTGATGC TERM 9 5639 - 5670 + T 70 -10 -3.06133 | opp_overlap 5649 CTGCATGCTTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTGACTGCAAACTTA yaaA 6459 - 5683 - | hypothetical protein SSON_0007 7446 - 7949 + | IS1 ORF TERM 10 8504 - 8488 - f 75 -11.5 -3.02144 | CCACCGGCGGTAATA GCCAGCG CAA CGCCGGC CAGGTTGCCGCTACC talB 9014 - 9967 + | transaldolase B TERM 11 9974 - 10003 + F 80 -12.9 -2.5294 | overlap 9973 9971 CTGCTGTAATCATTC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAGCCTG mogA 10082 - 10669 + | molybdenum cofactor biosynthesis protein TERM 12 10692 - 10675 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC GAGC GGGGGGA TCTCAAAACAATTAG yaaH 11270 - 10704 - | hypothetical protein TERM 13 11154 - 11144 - G 75 -6.8 -4.36914 | TGCCGCCGTAGAAAA TGCC CAT GGCA AGAATAATACCGTCC SSON_0012 12132 - 11419 - | hypothetical protein TERM 14 11564 - 11524 - G 72 -11.2 -3.07994 | TTTAACCCCATTTAA TGCTGCGC-CCACAGGGCCT CCC AGACCC-GCGCCGCGCAGCA AACCATGCCCAAGCA TERM 15 11886 - 11920 + g 90 -14.4 -2.96274 | opp_overlap 11918, overlap 11880 ATTTACCGTGTCCGC GCAGTTTGTTGGCGAT ACT ATCGCCACCAAAATGC TGTAATTCTCCAGCA TERM 16 12018 - 12030 + g 80 -5.5 -4.93968 | overlap 12009 TCAGTACGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT yaaI 12562 - 12158 - | hypothetical protein TERM 17 12624 - 12650 + H 75 -3 -5.11112 | TTTACTGCTGATAAA GAGAAGATTCAG GTA CGTAATCTTTTC TTTTTATTACAATTT dnaK 12939 - 14855 + | molecular chaperone DnaK TERM 18 14919 - 14880 - f 84 -13.6 -2.91467 | gap 1, opp_overlap 14881 AAACGGGTAATTATA CTGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGACAAT TERM 19 14881 - 14918 + F 100 -17.1 -3.25823 | gap 1, opp_overlap 14880 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGACAA TERM 20 15025 - 15012 - g 71 -2.3 -4.98531 | GCGTGAAATCAAAAA GGCCT ACAA ACGCC TGGCCATGAAATACC TERM 21 16019 - 16029 + G 70 -6.8 -4.03811 | overlap 16021 AGCACAACAGCCCGC GCTC AAA GAGC TTCTTTGATGGTGTG dnaJ 14944 - 16074 + | chaperone protein DnaJ TERM 22 16103 - 16086 - T 95 -12.7 -4.09739 | opp_overlap 16086 CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC TTGGGTAAAATTAGG TERM 23 16086 - 16103 + T 80 -12.7 -3.07994 | opp_overlap 16086 CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC TTGGGTAAAATTAGG TERM 24 16172 - 16149 - T 73 -8 -4.15565 | opp_overlap 16150 16151, overlap 16150 GCGAGCACCTGAAAA GTGGCGGGGA TCAC TCCCCGCCGT TGCTCTTACTCGGAT TERM 25 16171 - 16150 - T 75 -11.5 -3.09018 | opp_overlap 16150 16151, overlap 16149 CGAGCACCTGAAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 26 16150 - 16171 + T 90 -13.7 -3.39449 | opp_overlap 16150 16149, overlap 16151 CGAGCACCTGAAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 27 16151 - 16170 + T 90 -15 -2.63348 | opp_overlap 16150 16149, overlap 16150 GAGCACCTGAAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG gef 16387 - 16178 - | Gef protein interferes with membrane function when in excess TERM 28 16395 - 16427 + r 80 -7.1 -4.64844 | gap 1, opp_overlap 16363 TTCAGCATATAGGGG GCCTCGGGTTGATA GTAAAA TATCA-CTCGGGGC TTTTCTCTATCTGCC SSON_0017 17855 - 17028 - | putative transposase TERM 29 17210 - 17230 + g 100 -5.3 -5.47159 | overlap 17190 17187 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG TERM 30 18763 - 18743 - g 77 -9.7 -3.59979 | overlap 18747 18757 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 31 18759 - 18747 - g 75 -6.9 -4.44046 | overlap 18743 18757 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_0018 17921 - 19093 + | IS21 ORF1 SSON_0019 19093 - 19890 + | IS21 ORF2 SSON_0020 20289 - 19900 - | hypothetical protein TERM 32 20604 - 20617 + G 70 -6.7 -4.06611 | overlap 20601 ATTCTTTAGCAGTGA TGCCT CGGG AGGCA TTATTCTTATCATTG nhaA 20572 - 21738 + | pH-dependent sodium/proton antiporter TERM 33 21754 - 21773 + F 93 -10.7 -4.59414 | CAGGACGGTTTACCG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 21798 - 22703 + | transcriptional activator NhaR SSON_0023 23424 - 22741 - | hypothetical protein TERM 34 23384 - 23400 + g 72 -5.1 -4.53853 | opp_overlap 23384, overlap 23387 TCTAAATTATAAGAT GACCTTC CTG GAAGCTC TATTTTTTTTACCGT SSON_0024 24517 - 23714 - | hypothetical protein SSON_0025 24753 - 25256 + | IS1 ORF SSON_0026 25635 - 25267 - | hypothetical protein TERM 35 25531 - 25500 - G 72 -10.4 -3.32562 | opp_overlap 25502 ATAAAGGTTGCATAA TATTGGCAGAAA GGCTATTT TTTCTGCCAATA TCATAAAAATCATCA TERM 36 25561 - 25541 - G 74 -3.3 -4.98436 | opp_overlap 25541 25559 CCAATATCATAAAAA TCATCATAA TCA CTCTGATGA TAGTGTTTATCATTT SSON_0027 27197 - 26076 - | hypothetical protein TERM 37 27936 - 27951 + r 74 -6 -4.57341 | opp_overlap 27937, overlap 27937 GCAGGCATAAAAAAA ACCCGC TTGC GCGGGC TTTTTCACAAAGCTT TERM 38 27937 - 27950 + r 73 -9.5 -3.33922 | opp_overlap 27937, overlap 27936 CAGGCATAAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 39 27950 - 27937 - R 100 -9.5 -5.96219 | opp_overlap 27937 27936 CAGGCATAAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 40 27966 - 27997 + r 72 -10.3 -2.89683 | opp_overlap 27975, overlap 27970 27974 CTTTTTCACAAAGCT TCAGCAAATTGGC GATTAA GCCAGTTTGTTGA TCTGTGCAGTCAGGT rpsT 28244 - 27981 - | 30S ribosomal protein S20 SSON_0029 28347 - 28565 + | hypothetical protein TERM 41 29464 - 29452 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 28573 - 29514 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 42 29723 - 29705 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 43 30712 - 30691 - g 71 -9.5 -3.55622 | gap 1 GTGAACGTCTTCAAA GCG-AACGAC ATC GTCGTTGCGC TGCTGCAGGAAAAAG TERM 44 30775 - 30752 - g 81 -8.8 -4.38712 | overlap 30753 TGCACGTTGAGAAAA TGCAGCACAG CTAT CCGTGCTGCT GGCGTCACAAAACGC TERM 45 30774 - 30753 - g 81 -12.3 -3.22906 | overlap 30752 GCACGTTGAGAAAAT GCAGCACAG CTAT CCGTGCTGC TGGCGTCACAAAACG TERM 46 32206 - 32181 - g 71 -10.5 -2.88069 | gap 1, overlap 32178 TGCAGACTATAACGA CGCACCTGCTGA TGC TCAGCAGA-GCG AAGTACTCAAAGGGC ileS 29557 - 32373 + | isoleucyl-tRNA synthetase TERM 47 32490 - 32456 - g 71 -9.2 -3.44848 | opp_overlap 32480, overlap 32454 TCTGGGCAGCAAATA CCTGATCCTCCAGAAC TTT GCTCTGGGGGATACGG TCCCGCTGTTCCCGT lspA 32373 - 32867 + | lipoprotein signal peptidase TERM 48 32895 - 32944 + F 100 -18.1 -3.53811 | gap 1, opp_overlap 32874 32873 32926 32941, overlap 32882 32885 GATGCGATGCTGACG CATCTTATCCGGCCTACAGATTGC TGC GAAATC-GTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 49 33069 - 33046 - g 88 -11 -4.14243 | CACTTCACGCTAAAA CTCGACGATG GCAC CACCGCCGAG TCTACCCGCAACAAC slpA 32992 - 33441 + | FKBX-type 16KD peptidyl-prolyl cis-trans isomerase ispH 33443 - 34393 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 50 34422 - 34441 + F 100 -9.3 -5.24129 | opp_overlap 34422, overlap 34439 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 51 34441 - 34422 - f 79 -9.3 -4.15453 | opp_overlap 34422 34439 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA yaaF 34459 - 35373 + | ribonucleoside hydrolase RihC dapB 35540 - 36361 + | dihydrodipicolinate reductase TERM 52 37753 - 37725 - g 73 -3.7 -4.84761 | overlap 37726 37749 AGATGTGGAGAAAAA CGTGGTGATGATC ACC GCCCAGAACCACG GTTTTGCGGTGGATG carA 36817 - 37965 + | carbamoyl phosphate synthase small subunit TERM 53 40567 - 40548 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC AAAAGTGGCGGCGCG carB 37983 - 41204 + | carbamoyl phosphate synthase large subunit TERM 54 41258 - 41277 + T 100 -10 -5.77853 | opp_overlap 41256 41258 ATCGAATAAGTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTTGCCCATT SSON_0039 41874 - 41371 - | IS1 ORF caiF 42242 - 42637 + | DNA-binding transcriptional activator CaiF TERM 55 42869 - 42891 + T 79 -8.4 -4.33165 | overlap 42884 TAGGCGTCACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTTCCTCCATTTGC caiE 43457 - 42846 - | carnitine operon protein CaiE caiD 44335 - 43442 - | carnitinyl-CoA dehydratase TERM 56 44309 - 44329 + g 72 -6.8 -4.27211 | overlap 44311 AGCGTGATTATTAGT TGGCAGGG TAGTT CCCTGCTG TTTCATTTATTTCAG TERM 57 44311 - 44327 + g 76 -9.4 -3.72091 | overlap 44309 CGTGATTATTAGTTG GCAGGG TAGTT CCCTGC TGTTTCATTTATTTC caiC 45904 - 44336 - | putative crotonobetaine/carnitine-CoA ligase TERM 58 44967 - 44948 - G 70 -10 -3.19003 | opp_overlap 44957 44960 ATAAGACGTCAGCAA GCGAACGC CGAA GCGTTCAC AAAACGCATCTTTTT TERM 59 44957 - 44977 + g 78 -5.4 -4.77036 | opp_overlap 44948, overlap 44960 CAGCAAGCGAACGCC GAAGCGTT CACAA AACGCATC TTTTTCCTGCTCCGA TERM 60 45793 - 45819 + g 75 -7.2 -4.38712 | ACCGGTTAACGACTC CGCCGCTGGATT CAC AAATCAGCGCCG TTTTATGACCGTAAA SSON_0044 46053 - 46355 + | IS600 ORF1 SSON_0045 46496 - 47209 + | IS600 ORF2 caiA 49718 - 48576 - | crotonobetainyl-CoA dehydrogenase TERM 61 48856 - 48872 + g 73 -3.6 -4.7497 | overlap 48857 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 51263 - 49749 - | L-carnitine/gamma-butyrobetaine antiporter TERM 62 51213 - 51241 + g 87 -4.5 -5.30339 | GACGATTATTAACGG CGGAAAGAAAACC TTC GGTTCTATTCCCG TTTTTCTCTTTTCAT TERM 63 51403 - 51418 + H 100 -6.2 -6.09133 | CAATAAGCTGCATTC TGTGAT TGTT ATCACA TTTTTTTTTCGGGTG TERM 64 51571 - 51607 + H 73 -9.7 -3.35695 | overlap 51565 TTTTTCTACGCCATG TTTTCAATATTGGTGAG GAA CTTAACAATATTGAAAG TTGGATTTATCTGCG fixA 51737 - 52507 + | putative electron transfer flavoprotein FixA fixB 52522 - 53463 + | putative electron transfer flavoprotein FixB TERM 65 54563 - 54546 - g 71 -2.6 -4.90266 | TTCAGTAAGCAAAAA CTGGCG GAATAT CGTCAG CATCTTGAGAGTGGC fixC 53514 - 54800 + | putative oxidoreductase FixC fixX 54797 - 55084 + | putative ferredoxin TERM 66 55409 - 55445 + F 77 -7.3 -4.49556 | opp_overlap 55414, overlap 55411 55415 AATGTTCCTCATTGA TATCATCGCCATCGG CGTGATA TCGGTGGCGACGATG TTTGTTTCATCCCCC TERM 67 55411 - 55443 + F 71 -7.7 -3.85603 | opp_overlap 55414, overlap 55409 55415 TGTTCCTCATTGATA TCATCGCCATCGG CGTGATA TCGGTGGCGACGA TGTTTGTTTCATCCC TERM 68 55600 - 55618 + F 79 -12.4 -2.80113 | CCGCCATGTGGTATG TCGGCGCG ACC TGCGCCGA TCTGGTCGGCTACTG yabF 56582 - 57112 + | glutathione-regulated potassium-efflux system ancillary protein KefF kefC 57105 - 58967 + | glutathione-regulated potassium-efflux system protein KefC folA 59159 - 59638 + | dihydrofolate reductase TERM 69 59662 - 59696 + T 82 -12.1 -3.322 | opp_overlap 59655, overlap 59663 AGAATTTACGGCTAG TGCCGGATGCGACGC CGGTC GCGTCTTATCCGGCC TTCCTATATCAGGCT TERM 70 59663 - 59695 + T 90 -15.6 -2.58999 | opp_overlap 59655, overlap 59662 GAATTTACGGCTAGT GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC CTTCCTATATCAGGC apaH 60558 - 59716 - | diadenosine tetraphosphatase apaG 60942 - 60565 - | ApaG TERM 71 60653 - 60674 + g 72 -8.7 -3.71527 | gap 1, overlap 60666 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 72 60744 - 60726 - G 76 -11 -3.30124 | opp_overlap 60726 60712 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 61766 - 60945 - | dimethyladenosine transferase pdxA 62752 - 61763 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 73 62618 - 62601 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG surA 64038 - 62752 - | peptidyl-prolyl cis-trans isomerase SurA imp 66445 - 64091 - | organic solvent tolerance protein TERM 74 65943 - 65966 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 65933 65943, overlap 65933 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCGCCACGTTGT TERM 75 66835 - 66821 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 76 66838 - 66858 + G 74 -3.1 -5.00884 | opp_overlap 66840, overlap 66846 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 66700 - 67515 + | DNA-J like membrane chaperone protein TERM 77 67568 - 67524 - T 72 -9.1 -3.6512 | opp_overlap 67542 67544, overlap 67539 67541 67542 TAAATAAGTTTTAAA CTGTAGGCCTGATAAGACGCG GCC CGCGTCGCATCAGGCAATCGG CGCACAATTGCCGGA TERM 78 67553 - 67539 - T 79 -11.4 -3.30124 | opp_overlap 67542 67544, overlap 67524 67541 67542 CTGTAGGCCTGATAA GACGCG GCC CGCGTC GCATCAGGCAATCGG TERM 79 67598 - 67541 - T 71 -9.8 -3.21924 | gap 1, opp_overlap 67542 67544, overlap 67539 67524 67542 67576 GTAGGCCTGATAAGA CGCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GCC TTATCCGCCTACCGA TERM 80 67542 - 67597 + T 73 -11.1 -2.58544 | gap 1, opp_overlap 67539 67524 67541 67542 67576, overlap 67544 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG TERM 81 67597 - 67542 - T 80 -13.3 -2.5294 | gap 1, opp_overlap 67542 67544, overlap 67539 67524 67541 67576 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG yabO 68291 - 67632 - | 23S rRNA/tRNA pseudouridine synthase A TERM 82 68024 - 68060 + g 72 -8.6 -3.72576 | gap 1, overlap 68026 GCTTTTTCGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC hepA 71209 - 68303 - | ATP-dependent helicase HepA TERM 83 68352 - 68364 + g 76 -9.1 -3.77219 | TCCAGACGCCAGCCT GCCTG ATC CAGGC TTTCCATTACCTGCT TERM 84 70071 - 70095 + g 70 -10 -3.16944 | overlap 70069 AGCGGCTCGATATCC TGCTCGCCGA TCATC TCGCCGAGCA TGTTCAGTTCGTCAT polB 73724 - 71373 - | DNA polymerase II TERM 85 71439 - 71428 - G 77 -5.8 -4.64676 | overlap 71429 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 86 73534 - 73485 - G 71 -10.7 -2.89602 | gap 1, opp_overlap 73530, overlap 73484 GGCGCGACAGTAAAG GCCATACACCGGCTGGCGGTGAAA ATC CTTTAACGCCAGC-GGTGTCAGGC GAAAGCCTTGTTTAC TERM 87 73745 - 73765 + r 76 -8.3 -4.14598 | opp_overlap 73745 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC TERM 88 73765 - 73745 - R 100 -8.3 -5.19261 | opp_overlap 73745 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC araD 74494 - 73799 - | L-ribulose-5-phosphate 4-epimerase TERM 89 74587 - 74563 - R 70 -9.9 -3.10622 | overlap 74562 GAGGGGGAAAACAAT GCCGGATGCGC TTT GCTTATCCGGC CTACAAAATCGCAGC TERM 90 74629 - 74659 + r 73 -11.2 -2.70932 | opp_overlap 74618 74621 74620, overlap 74608 ATAAGACGCGTCAGC GTCGCATCAGGCAT TAC ATACCTGATGTGGC TACTTAGCGACGAAA araA 76165 - 74663 - | L-arabinose isomerase araB 77876 - 76176 - | ribulokinase TERM 91 76491 - 76515 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTGACGGCGATC TERM 92 77238 - 77215 - G 72 -5.3 -4.49958 | gap 2, opp_overlap 77218, overlap 77217 AGCTCATCAAAGAAA CTGGCTGGCGG CAAG CCGCC--CCAG CTTTCGTGCCACAGA TERM 93 77985 - 77971 - H 82 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGC ATAGCA AAGTGTGACGCCGTG araC 78215 - 79093 + | DNA-binding transcriptional regulator AraC TERM 94 79616 - 79637 + G 85 -8.6 -4.45544 | opp_overlap 79615 CACGCCGAATATTAT CGGCTGCC TGCTGT GGCCGCCG TTTTACTTCCTGCCA TERM 95 79717 - 79736 + G 76 -4.2 -4.92314 | overlap 79719 GTGAGTTTAAATGGT TGCTGCTG GCGA CGGCGGTA TTTTTGTGGGTTGGT yabI 79179 - 79943 + | hypothetical protein TERM 96 79960 - 80010 + T 79 -8.9 -4.18058 | GGATAGTTTGCATCG GCGC-TGGTTTGTTCCCTTCTCCCC AGA GGGGCGAGGGGA-CTGTCCGTGCGC TTTTAACCTGTAATT thiQ 80711 - 80013 - | thiamine transporter ATP-binding subunit thiP 82305 - 80695 - | thiamine transporter membrane protein TERM 97 80785 - 80773 - G 78 -10.5 -3.48036 | TAGTAGCAGAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA TERM 98 81151 - 81139 - G 77 -6.9 -4.49314 | GAGCAGTAAAAAGAA GCCGG TAG CCAGC ACAATCCCCGGCATG tbpA 83264 - 82281 - | thiamine transporter substrate binding subunit TERM 99 83128 - 83138 + g 91 -5.4 -5.32699 | overlap 83131 TCGCAGTTACAGTCG GCTT CAA AAGC TTTTTTGATCTTTGG yabN 85083 - 83428 - | transcriptional regulator SgrR TERM 100 84554 - 84542 - G 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGATATTTGCTGCC TERM 101 85349 - 85369 + H 100 -9.7 -6.17268 | GTGTAAAATCACCCG CCAGCAGAT TAT ACCTGCTGG TTTTTTTTATTCTCG yabM 85405 - 86520 + | putative transport protein SSON_0077 86769 - 87272 + | IS1 ORF TERM 102 87400 - 87381 - T 100 -15 -3.64599 | GGACGATAGCGGAAA GCCCGGTC ATTT GACCGGGC AAGGGGATTAATTCA leuD 88013 - 87408 - | isopropylmalate isomerase small subunit TERM 103 87844 - 87854 + g 72 -4.6 -4.72272 | overlap 87849 ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCGAGAAA leuC 89424 - 88024 - | isopropylmalate isomerase large subunit TERM 104 88719 - 88736 + g 70 -4.1 -4.58685 | overlap 88716 88716 TAAAGGTGGTTTCGT CCGGT GCAACCAG ACCGG TTTTTGCGCCCATTT TERM 105 88832 - 88853 + g 74 -7.9 -4.12902 | overlap 88850 AACTCCACCACATGC CCGGTGCCG CCTG CGCTACCGG TTTTACCGATAATTG TERM 106 88943 - 88955 + g 76 -9.1 -3.75629 | ATGGTTTTTGCGCGG CCCTG TTT CAGGG TTTGCGTTGCCAGTA leuB 90518 - 89427 - | 3-isopropylmalate dehydrogenase leuA 92089 - 90518 - | 2-isopropylmalate synthase TERM 107 91223 - 91234 + g 72 -5.8 -4.41616 | AGCGAATGCGCTGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 108 91939 - 91929 - G 72 -6.8 -4.19817 | TGCACCGATTCAAAA TCGC CCG GCGA AGAGACGGGGAAACC TERM 109 92140 - 92157 + r 100 -14.1 -5.65927 | opp_overlap 92140 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG TERM 110 92157 - 92140 - R 100 -14.1 -5.60993 | opp_overlap 92140 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG leuL 92268 - 92182 - | leu operon leader peptide TERM 111 93228 - 93238 + G 70 -6.8 -4.07568 | GTACAAAATGAATTG CCTG GTT CAGG TTTTGAACCCGCGAG TERM 112 93790 - 93776 - g 77 -2.8 -5.07652 | opp_overlap 93776, overlap 93784 GCCGTTAAAACAAAA TAGCAG AAC CTGTTA TCTCTCCTGGCATGA leuO 92928 - 93872 + | leucine transcriptional activator TERM 113 93878 - 93917 + F 100 -12.4 -5.49234 | opp_overlap 93878, overlap 93880 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TGAA TGTCTGGTTTATTCTGTA TTTTTTATTGAATGT TERM 114 93880 - 93915 + F 100 -12.8 -4.37495 | opp_overlap 93878, overlap 93878 AACGCTAACTGAATG CAGAATAGGTCAGACA TGAA TGTCTGGTTTATTCTG TATTTTTTATTGAAT TERM 115 94036 - 94052 + F 72 -5.1 -4.68612 | opp_overlap 94036 TTATTATCAATTTAA TCCTTCG TAA TGGAGGA TTTTATCGTTTCTTT TERM 116 94149 - 94161 + F 83 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCGTCAAAC TERM 117 95503 - 95493 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 94190 - 95914 + | acetolactate synthase 3 catalytic subunit ilvH 95917 - 96408 + | acetolactate synthase 3 regulatory subunit TERM 118 96434 - 96454 + G 100 -9.7 -5.41143 | AATGCGCAATTTGCA GCCCAACAT GTC ACGTTGGGC TTTTTTTGCGAAATC fruL 96420 - 96506 + | fruR leader peptide fruR 96588 - 97592 + | DNA-binding transcriptional regulator FruR TERM 119 97638 - 97607 - f 100 -13.8 -5.06816 | gap 1, overlap 97593 AGCCGCGAACAAAAA TACGCGCCAG-GTGA ATT TCCCTCTGGCGCGTA GGTGATGCTGCCAAC SSON_0088 97888 - 98391 + | IS1 ORF yabB 98971 - 99429 + | cell division protein MraZ TERM 120 99670 - 99698 + G 76 -12.4 -2.52623 | overlap 99669 CCACGGACCTTTCTC CGCGCTGGGCGA ATACG TTGCCGAGCGCG ATCTTATCGGCAAGA TERM 121 99764 - 99775 + G 70 -3.6 -4.61873 | CCGCAACTTGATGAT GCTG AGCG CGGC TTTTCCTTTATGCGC mraW 99431 - 100372 + | S-adenosyl-methyltransferase MraW TERM 122 100693 - 100680 - g 76 -8.1 -4.18494 | opp_overlap 100679 100677 GATCGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 100369 - 100734 + | cell division protein FtsL TERM 123 100797 - 100817 + G 78 -7.6 -4.37734 | opp_overlap 100797 100795 100798, overlap 100798 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 124 102316 - 102337 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 102285, overlap 102319 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 125 102319 - 102334 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 102285, overlap 102316 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 126 102375 - 102393 + G 73 -11.6 -2.67171 | opp_overlap 102372 102369, overlap 102372 102374 102373 102389 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 100750 - 102516 + | septum formation; penicillin-binding protein 3; peptidoglycan synthetase TERM 127 103620 - 103610 - g 81 -6.8 -4.62783 | overlap 103611 GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGCCTGCACTG murE 102503 - 103996 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 128 104433 - 104394 - g 87 -13.6 -3.07443 | opp_overlap 104403, overlap 104403 TTATACGGCAGGCAA TCTCAACAACGACATCGG TGTA CCGATGACGTTGTTGCGC TTGACGCCGGAATAC TERM 129 104403 - 104424 + G 77 -10.1 -3.68222 | opp_overlap 104394 104403 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG TTGTTGCGCTTGACG TERM 130 104424 - 104403 - g 77 -10.1 -3.6849 | opp_overlap 104403, overlap 104394 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG TTGTTGCGCTTGACG TERM 131 105191 - 105173 - g 70 -5.2 -4.41348 | opp_overlap 105187, overlap 105177 GCGTGGGTAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 103993 - 105351 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 105345 - 106427 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 132 106509 - 106529 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA TERM 133 107620 - 107606 - g 70 -10 -3.16608 | ACCGAAACCATGGAA CAAGCG ATG CGCTTG CTGGCTCCGCGTGTT murD 106430 - 107746 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 107746 - 108990 + | cell division protein FtsW TERM 134 109495 - 109510 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 108987 - 110054 + | N-acetylglucosaminyl transferase murC 110108 - 111583 + | UDP-N-acetylmuramate--L-alanine ligase ddl 111576 - 112496 + | D-alanine--D-alanine ligase ftsQ 112498 - 113328 + | cell division protein FtsQ ftsA 113325 - 114587 + | cell division protein FtsA ftsZ 114648 - 115799 + | cell division protein FtsZ lpxC 115900 - 116817 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase yacA 117048 - 117560 + | SecA regulator SecM TERM 135 119397 - 119410 + G 75 -4.5 -4.8622 | opp_overlap 119397 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC secA 117622 - 120327 + | preprotein translocase subunit SecA TERM 136 120366 - 120349 - f 100 -12.7 -4.42639 | opp_overlap 120349 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 137 120349 - 120366 + F 100 -12.7 -5.33866 | opp_overlap 120349 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 138 120614 - 120597 - g 70 -4.1 -4.62069 | overlap 120599 TCGCTATTTGAAAAA CTGGAAT ATGA ATTCCCG GACAGGCATATAACT mutT 120387 - 120776 + | nucleoside triphosphate pyrophosphohydrolase TERM 139 120777 - 120806 + T 76 -12.1 -2.72144 | opp_overlap 120786 120787, overlap 120776 120787 CTTAAGCGTCTGTAG GTCGGATAAGGCG TTCA CGCCGCATCCGAC ATTTGCACAAGATGC SSON_0108 120925 - 120791 - | hypothetical protein TERM 140 120852 - 120820 - GT 76 -12 -2.53449 | opp_overlap 120787 120829, overlap 120787 120819 120817 ACATTTGCACAAGAT GCCTGATGCGACGC TGTCC GCGTCTTATCAGGC CTACGTGCGGCATCA yacG 121073 - 120876 - | zinc-binding protein yacF 121826 - 121083 - | hypothetical protein TERM 141 121438 - 121428 - G 70 -6.8 -4.08485 | TGTAGGTAAATCAAA GCTG CAA CAGC CGCCTGGGATGCTCA TERM 142 121508 - 121538 + g 72 -6.8 -4.21462 | GAAATTGCCCGATAC GCGGCGCGGA AATTAATACGC TCCCCGCCGC TTTTAACTGCTGAAT coaE 122446 - 121826 - | dephospho-CoA kinase TERM 143 122150 - 122201 + g 74 -2.3 -5.0916 | gap 2, opp_overlap 122176 AGTAGCTTGCTGGAT CTGGTGTTGCGTCTCTTGCTGAATC AGCG GATGCAGCA-GGG-CGTTAAGCCAG TTTTTCTCTTCCGGG TERM 144 122419 - 122384 - G 76 -9 -3.81951 | overlap 122385 TCCGAGATCAGCAAA CGCATTGGCAACGGTA CTCT TGCCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 145 122418 - 122385 - G 78 -12.5 -2.88849 | overlap 122384 CCGAGATCAGCAAAC GCATTGGCAACGGTA CTCT TGCCACTGCCAATGC CTCCCGTTAAGGCAA SSON_0113 123741 - 123634 - | hypothetical protein guaC 122671 - 123714 + | guanosine 5'-monophosphate oxidoreductase TERM 146 123723 - 123748 + gT 85 -12.6 -3.32963 | CCTGTAATCTTCCAA CGCTGGTGTG GAGCAA CACGCCAGCG TTATCCCATCCCACT hofC 124951 - 123749 - | type IV pilin biogenesis protein TERM 147 124421 - 124407 - G 73 -4.2 -4.77165 | TCCGGCAGAACAAAA TGCAGC ATT GCCACA ACCACCATGATTGCC ppdD 126777 - 126337 - | putative major pilin subunit TERM 148 126730 - 126717 - G 70 -6.7 -4.08692 | CAATGGCGCTTAAAA TGGCA ATGA TGCCA ATAACCACCATCAGT nadC 127873 - 126980 - | quinolinate phosphoribosyltransferase TERM 149 127245 - 127267 + g 72 -5.4 -4.57073 | TCGACTTCTACTGGC GCATCCGGGT GCA GCCAGGACGC TTTTTCGACGGCCTG ampD 127961 - 128512 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 128509 - 129363 + | regulatory protein AmpE TERM 150 129398 - 129370 - T 72 -10.2 -2.84325 | overlap 129367 TTGGTGTAAAGATTA TTGCCCTCACCC TGCAT GGGTGAGGGCGT AGAGAGATTAATGCG aroP 130779 - 129406 - | aromatic amino acid transporter pdhR 131320 - 132084 + | transcriptional regulator PdhR TERM 151 132205 - 132158 - f 73 -11.4 -2.70979 | opp_overlap 132175, overlap 132154 132155 132161 CGGCAACTAAACGTA GAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 152 132464 - 132452 - g 78 -9.1 -3.9461 | opp_overlap 132451 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG aceE 132245 - 134908 + | pyruvate dehydrogenase subunit E1 aceF 134923 - 136815 + | dihydrolipoamide acetyltransferase TERM 153 136843 - 136822 - f 95 -11.5 -4.43477 | opp_overlap 136824, overlap 136824 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 154 136824 - 136841 + F 100 -14.1 -5.32882 | opp_overlap 136824 136822 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 155 136841 - 136824 - f 100 -14.1 -3.82321 | opp_overlap 136824, overlap 136822 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 156 138004 - 137976 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TGGACGACCGTGGTT lpdA 137140 - 138564 + | dihydrolipoamide dehydrogenase TERM 157 138599 - 138565 - T 72 -9.4 -3.62255 | opp_overlap 138555 GCGAAGAAGAAGTAA TTTTTCGTTTGCCGGA ACA TCCGGCAATTAAAAAA GCGGCTAACCACGCC TERM 158 138616 - 138600 - T 85 -6.5 -5.26875 | opp_overlap 138600 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC TERM 159 138600 - 138616 + T 91 -6.5 -5.50499 | opp_overlap 138600 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC yacH 140392 - 138635 - | hypothetical protein TERM 160 138787 - 138772 - G 70 -4.7 -4.56597 | CTTTTTCCCGAAAAA CCTGA CGTTGT TCAGG TGATGCCGATTGTAT TERM 161 138833 - 138853 + g 73 -3.9 -4.8622 | overlap 138836 ATCACGTTGCTGTTG GTTCAGTGG GCG CTGCTGTAC TTTTTCCTTAAACAC TERM 162 140522 - 140510 - H 71 -7.7 -3.86346 | GGATTCGTTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 163 140865 - 140854 - g 77 -7.2 -4.57837 | overlap 140855 140856 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT acnB 140747 - 143344 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 164 143405 - 143380 - f 93 -12.7 -3.66897 | gap 1, opp_overlap 143380, overlap 143372 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA TERM 165 143380 - 143405 + F 100 -12.7 -5.72622 | gap 1, opp_overlap 143372 143380 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA yacL 143519 - 143881 + | hypothetical protein TERM 166 143914 - 143887 - T 100 -17.8 -4.59982 | GCAGAAGTAAATAAA TCTGGCGGAGCC TGGG AGCTCCGCCAGA GCCGTTAAACAGCTG speD 144713 - 143919 - | S-adenosylmethionine decarboxylase speE 145595 - 144729 - | spermidine synthase TERM 167 145677 - 145652 - R 74 -10.5 -3.24255 | opp_overlap 145652 145654, overlap 145645 145654 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 168 145675 - 145654 - R 77 -10.9 -3.17362 | opp_overlap 145654 145652, overlap 145652 145645 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 146171 - 145701 - | hypothetical protein TERM 169 146168 - 146178 + g 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 170 147599 - 147587 - g 70 -5.5 -4.3739 | overlap 147594 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGGCTCATCGCGCG yacK 146214 - 147764 + | multicopper oxidase TERM 171 147806 - 147783 - T 82 -11 -3.57462 | opp_overlap 147780 147785, overlap 147785 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTATTTCACAT TERM 172 147785 - 147804 + T 93 -13.6 -3.65135 | opp_overlap 147783 147785, overlap 147780 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC TERM 173 147804 - 147785 - T 90 -13.6 -3.36515 | opp_overlap 147785 147780, overlap 147783 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC gcd 150201 - 147811 - | glucose dehydrogenase TERM 174 148455 - 148437 - G 76 -11 -3.40597 | overlap 148435 CGCCCCATTCAAACA TTCCCAGG TTA CCCGGGAA GACCAGCGTGCCCTG TERM 175 149362 - 149372 + g 78 -8.2 -4.15328 | overlap 149363 149369 ATCCGCCATCACTTC CGGC GAA GCCG TTTCTGCTTTGGCTT hpt 150407 - 150943 + | hypoxanthine phosphoribosyltransferase TERM 176 150947 - 150980 + T 79 -3.1 -5.4182 | gap 1, overlap 150950 150951 CGGGACGAGTAAGTG TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA TTTTTATTTGTGGTT yadF 151646 - 150984 - | carbonic anhydrase TERM 177 152269 - 152285 + G 70 -3.5 -4.60924 | TGGATATTGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA yadG 151755 - 152681 + | putative ATP-binding component of a transport system yadH 152678 - 153448 + | hypothetical protein TERM 178 153455 - 153484 + F 79 -9.3 -4.10657 | overlap 153456 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT TGGGGGAGAGGAG TTTTGACGGCTATCA TERM 179 153456 - 153483 + F 73 -10.6 -3.06073 | overlap 153455 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT TGGGGGAGAGGA GTTTTGACGGCTATC yadI 153553 - 153993 + | putative PTS system enzyme IIB component yadE 154057 - 155286 + | hypothetical protein panD 155670 - 155290 - | aspartate alpha-decarboxylase TERM 180 155369 - 155353 - G 73 -9.4 -3.63744 | opp_overlap 155337 155363, overlap 155351 GTCGCCTTCAAAATA GGCGAC GTTGG GTCGCC AGGTGCGAGCTTCTT TERM 181 155703 - 155717 + H 82 -11.4 -3.56099 | opp_overlap 155703 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 182 155717 - 155703 - H 79 -11.4 -3.33696 | opp_overlap 155703 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC yadD 155887 - 156840 + | hypothetical protein TERM 183 157036 - 157015 - T 79 -11.7 -3.14132 | GCTCCTGGGGATTAA TGAGAGACA TCCA TGTCTCTCA CCGAAGGCCAGCCTG TERM 184 157060 - 157042 - T 73 -10.2 -3.05463 | opp_overlap 157040 157057 ATGTCTCTCACCGAA GGCCAGCC TGC GGCTGGGC AAATTCGTTCCTGAC panC 157983 - 157132 - | pantoate--beta-alanine ligase panB 158789 - 157995 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 185 158862 - 158898 + H 79 -10.8 -3.63694 | opp_overlap 158864 158867, overlap 158863 GGGCAATGATTTATC AATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGAC TTATTAAGGGTAGGT TERM 186 158863 - 158897 + H 87 -14.3 -2.77895 | opp_overlap 158864 158867, overlap 158862 GGCAATGATTTATCA ATTACCGCACCGCCA GATGA TGGCGGTGCGGTGGA CTTATTAAGGGTAGG TERM 187 158896 - 158864 - H 83 -13.4 -3.20435 | opp_overlap 158863 158862, overlap 158867 GCAATGATTTATCAA TTACCGCACCGCCA GATGA TGGCGGTGCGGTGG ACTTATTAAGGGTAG TERM 188 158893 - 158867 - H 100 -19.5 -2.79276 | opp_overlap 158863 158862, overlap 158864 ATGATTTATCAATTA CCGCACCGCCA GATGA TGGCGGTGCGG TGGACTTATTAAGGG TERM 189 159309 - 159287 - H 75 -6.2 -4.50358 | opp_overlap 159288 159292, overlap 159288 AGTGAAATATCAAAA GGAACCGGTG TGG CACCGTTTCT GATTTGTTCTGCACT TERM 190 159308 - 159288 - H 71 -9.7 -3.2913 | opp_overlap 159288 159292, overlap 159287 GTGAAATATCAAAAG GAACCGGTG TGG CACCGTTTC TGATTTGTTCTGCAC TERM 191 159288 - 159308 + H 71 -9.7 -3.15008 | opp_overlap 159288 159287, overlap 159292 GTGAAATATCAAAAG GAACCGGTG TGG CACCGTTTC TGATTTGTTCTGCAC TERM 192 159292 - 159304 + H 83 -9.1 -4.21885 | opp_overlap 159288 159287, overlap 159288 AATATCAAAAGGAAC CGGTG TGG CACCG TTTCTGATTTGTTCT SSON_0143 159623 - 160126 + | IS1 ORF SSON_0144 160653 - 161558 + | insertion element IS2 transposase InsD yadK 162935 - 162339 - | putative fimbrial protein yadL 163564 - 162962 - | putative fimbrial protein TERM 193 163082 - 163072 - G 70 -5.4 -4.32177 | TCATCGGATAATAAA CAAC CGC GTTG GCTGCATTGGAGATA SSON_0147 164964 - 164059 - | insertion element IS2 transposase InsD SSON_0148 165287 - 164922 - | insertion sequence 2 OrfA protein SSON_0149 166368 - 165337 - | IS630 orf TERM 194 165383 - 165402 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 165395 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG SSON_0150 168180 - 167677 - | IS1 ORF ecpD 170391 - 169651 - | putative chaperone protein EcpD TERM 195 170462 - 170420 - R 72 -5.9 -4.44548 | gap 1 CAGAGTTAATTAAAA CAGGGAATAATA-TAAAAAT AGAA ATTATTAACACTATTCCCTG TATATTCATTCAATC yadN 171080 - 170496 - | putative fimbrial-like protein TERM 196 171447 - 171425 - R 79 -8 -4.3898 | opp_overlap 171427 ATGATTTTCAGAAAA TATTTATATT CGT AATATAAATA AATTACCATTTGCTT folK 171929 - 171450 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 173344 - 171926 - | poly(A) polymerase I yadB 174279 - 173383 - | glutamyl-Q tRNA(Asp) synthetase TERM 197 173671 - 173661 - G 81 -6.8 -4.65895 | opp_overlap 173670 CTTTCCAGCCAAAAA GCTG GTA CAGC GAGATTTGCCTTACT TERM 198 174320 - 174296 - R 85 -5.6 -5.4505 | opp_overlap 174299, overlap 174299 TCTTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 199 174317 - 174299 - R 100 -11.7 -4.81306 | opp_overlap 174299, overlap 174296 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT TERM 200 174299 - 174317 + r 79 -12.4 -2.79302 | opp_overlap 174299 174296 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT dksA 174801 - 174346 - | DnaK transcriptional regulator DksA sfsA 175683 - 174979 - | sugar fermentation stimulation protein A TERM 201 175326 - 175347 + g 77 -7.3 -4.48175 | gap 1, opp_overlap 175326 175321, overlap 175340 GCAACATAAAGTCAA TACGGCTGCG TTC TGC-GCCGTA TTTTACTTCGCTTTT TERM 202 175641 - 175631 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC yadP 176237 - 175698 - | hypothetical protein TERM 203 175947 - 175935 - G 74 -10.5 -3.15544 | CGCCAGCTGGATTAA GCCGC GTG GCGGC TGACGCATCCCTAAC TERM 204 176066 - 176045 - G 70 -7.3 -4.07568 | opp_overlap 176045 176051, overlap 176051 TCCGTCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC GGCGCTCACTTCGCC hrpB 176257 - 178731 + | ATP-dependent RNA helicase HrpB TERM 205 179230 - 179242 + G 78 -9.1 -3.86346 | GGCAAGGTCTGGCAA CTGCC CGC GGCAG TTTATGGCCGAATGG TERM 206 180297 - 180283 - g 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAG mrcB 178927 - 181461 + | penicillin-binding protein 1b TERM 207 181503 - 181477 - f 100 -16.7 -3.61268 | CATCTAAGCGTGAAA TACCGGATGGC GAATT GCCATCCGGTA AAATAACATCCCACC TERM 208 181586 - 181605 + F 76 -9.2 -3.68662 | GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT TERM 209 182414 - 182400 - g 76 -4.2 -4.98436 | opp_overlap 182400, overlap 182392 182402 CGAACAGCAGAAAAA CTCTGA ATC TCAGCG TTATACCATTGCTCC fhuA 181681 - 183870 + | ferrichrome outer membrane transporter TERM 210 183881 - 183902 + F 82 -11.5 -3.5774 | overlap 183882 183898 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCA TTTCACAAGTTGGCT TERM 211 183882 - 183901 + F 90 -15 -2.74322 | overlap 183881 183898 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC ATTTCACAAGTTGGC fhuC 183921 - 184718 + | iron-hydroxamate transporter ATP-binding subunit TERM 212 184741 - 184769 + G 88 -11 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGTCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 184718 - 185608 + | iron-hydroxamate transporter substrate-binding subunit TERM 213 185747 - 185761 + G 72 -4.3 -4.66163 | opp_overlap 185741 CGCCAGACATCGATG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 185605 - 187587 + | iron-hydroxamate transporter permease subunit TERM 214 187683 - 187642 - T 70 -9.3 -3.32844 | opp_overlap 187653 187654 187656, overlap 187646 GCGTTTACGCGACAA CGGATGCCCGATGCGACGC TGGC GCGTCTTATCGGGCCTACA AACGGCCCCGAATCG TERM 215 187679 - 187646 - T 73 -10.9 -2.60079 | opp_overlap 187653 187654 187656, overlap 187642 TTACGCGACAACGGA TGCCCGATGCGACGC TGGC GCGTCTTATCGGGCC TACAAACGGCCCCGA hemL 189025 - 187745 - | glutamate-1-semialdehyde aminotransferase TERM 216 187894 - 187884 - G 72 -6.8 -4.23615 | overlap 187880 ATCATATGGAAGAAA CGCT TAA AGCG TTCCACGTCACAGGC TERM 217 189302 - 189278 - g 88 -11.4 -3.85698 | overlap 189281 CTCCCTCTTTAGAAA CACCGCAGGC CGCGC GCCTGCGACG CAGACAACTGATTCG TERM 218 189299 - 189281 - g 73 -11.7 -2.70946 | overlap 189278 CCTCTTTAGAAACAC CGCAGGC CGCGC GCCTGCG ACGCAGACAACTGAT TERM 219 189820 - 189838 + G 81 -4.4 -5.14682 | overlap 189822 CTGGCTGCGGCCTTT AACGCGCC GCT GGCGGGTA TTTTGTTTATTATCG TERM 220 189822 - 189836 + G 72 -7 -4.18024 | overlap 189820 GGCTGCGGCCTTTAA CGCGCC GCT GGCGGG TATTTTGTTTATTAT yadQ 189250 - 190671 + | chloride channel protein yadR 190753 - 191097 + | iron-sulfur cluster insertion protein ErpA TERM 221 191107 - 191135 + T 93 -12.5 -3.68024 | overlap 191109 ATCTAATCTGTTGTT CATGTGCCGGATA AAC TATCCGGCGCATC TTCTCTCTTCAACGC TERM 222 191109 - 191133 + T 100 -15.1 -3.41962 | overlap 191107 CTAATCTGTTGTTCA TGTGCCGGATA AAC TATCCGGCGCA TCTTCTCTCTTCAAC yadS 191767 - 191144 - | hypothetical protein yadT 192605 - 191805 - | vitamin B12-transporter protein BtuF TERM 223 191984 - 191972 - G 71 -9.1 -3.50853 | CGCCTGTAATGACAA TCGCC TGT GGCGA GCGTGCTAACACCTG TERM 224 192590 - 192568 - G 72 -4.7 -4.63486 | overlap 192570 AGTGGCGCAAGAAAA GACAGGGCG ACCAG CGCCCTGAA CAGTGACTTAGCCAT TERM 225 192588 - 192570 - G 90 -11.7 -3.93367 | overlap 192568 TGGCGCAAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGACTTAGCC pfs 193296 - 192598 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SSON_0173 194463 - 194966 + | IS1 ORF TERM 226 196135 - 196155 + G 70 -11.1 -2.78216 | opp_overlap 196135 196132, overlap 196132 AGCAACAGAAATTCA TGGCGCTGG GTT CCGGCGTCA TCATTGATGCCGATA htrA 195804 - 197228 + | serine endoprotease TERM 227 197239 - 197262 + F 95 -14.6 -3.52093 | AGTAATCTCCCTCAA CCCCTTCCTG AATA CGGGAAGGGG TTCTCCTTACAATCT yaeG 197383 - 198540 + | carbohydrate diacid transcriptional activator CdaR yaeH 199015 - 198629 - | hypothetical protein TERM 228 198887 - 198901 + g 75 -7.1 -4.40003 | AAACTTCACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA yaeI 199968 - 199177 - | phosphodiesterase YaeI TERM 229 199706 - 199690 - G 72 -8.7 -3.82665 | GAGGACATCACTAAA CGCCGAA AAA TTCAGCG GCATATCAAATAATA TERM 230 200033 - 200011 - R 100 -10.5 -5.75342 | overlap 200012 TCCCTGCAAAAAAAA TCGGGCAGC GTCGT GCTGCCCGT GTGCATACTTTTAGT TERM 231 200032 - 200012 - R 100 -14 -4.04482 | overlap 200011 CCCTGCAAAAAAAAT CGGGCAGC GTCGT GCTGCCCG TGTGCATACTTTTAG dapD 200868 - 200044 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 232 200385 - 200404 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATGCCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC glnD 203571 - 200899 - | PII uridylyl-transferase TERM 233 203626 - 203611 - R 100 -11.8 -5.15634 | opp_overlap 203605 203611 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC TERM 234 203611 - 203626 + r 82 -11.8 -3.4758 | opp_overlap 203611, overlap 203605 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC map 204427 - 203633 - | methionine aminopeptidase TERM 235 204377 - 204387 + g 74 -2.4 -5.15381 | overlap 204366 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 236 205205 - 205194 - g 72 -7.2 -4.24413 | overlap 205191 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 204795 - 205520 + | 30S ribosomal protein S2 TERM 237 205513 - 205501 - f 73 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCTT TERM 238 205695 - 205715 + F 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 239 205950 - 205934 - g 77 -3 -5.13521 | gap 1, overlap 205935 205938 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 205778 - 206629 + | elongation factor Ts TERM 240 206640 - 206661 + F 100 -13.7 -4.84761 | opp_overlap 206640 206643 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 241 206661 - 206640 - f 91 -11.5 -4.23892 | opp_overlap 206640, overlap 206643 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 242 206658 - 206643 - f 79 -11.8 -3.12324 | opp_overlap 206640, overlap 206640 AATTATCGAAAAGGA GCCGCC TGAG GGCGGC TTCTTTTTGTGCCCA pyrH 206776 - 207501 + | uridylate kinase frr 207793 - 208350 + | ribosome recycling factor TERM 243 208330 - 208350 + F 76 -8.3 -4.15044 | opp_overlap 208330 208331 208333, overlap 208331 208333 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 244 208350 - 208330 - f 76 -8.3 -4.14627 | opp_overlap 208330 208331 208333, overlap 208331 208333 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 245 208331 - 208349 + F 78 -11.8 -3.08812 | opp_overlap 208330 208331 208333, overlap 208330 208333 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 246 208349 - 208331 - f 78 -11.8 -3.08294 | opp_overlap 208331 208330 208333, overlap 208330 208333 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 247 208363 - 208411 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 208369, overlap 208364 208369 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 248 208364 - 208410 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 208369, overlap 208363 208369 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 249 208405 - 208369 - f 100 -13 -4.98255 | gap 1, opp_overlap 208364 208363 208369 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 250 208369 - 208405 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 208369, overlap 208364 208363 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC yaeM 208442 - 209638 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 251 209743 - 209760 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG yaeS 209824 - 210585 + | undecaprenyl pyrophosphate synthase cdsA 210598 - 211455 + | CDP-diglyceride synthase yaeL 211467 - 212819 + | zinc metallopeptidase TERM 252 213358 - 213347 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 253 214082 - 214058 - g 70 -9.9 -3.14026 | opp_overlap 214054 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAGG TAGATGTAGTCTACA yaeT 212849 - 215281 + | outer membrane protein assembly factor YaeT TERM 254 215380 - 215363 - f 71 -7.7 -3.96216 | overlap 215364 GGGCCACGCAAAGAA CTGCACC CTCC GGTGCAA ATGGGATGGTAAGGA TERM 255 215865 - 215837 - g 80 -11.8 -3.28712 | overlap 215823 215822 215853 CGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 215403 - 215888 + | periplasmic chaperone TERM 256 215970 - 215945 - g 82 -13.3 -2.97245 | opp_overlap 215943, overlap 215940 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 215892 - 216917 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 257 216944 - 216981 + F 95 -12.7 -4.07515 | overlap 216946 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 258 216946 - 216979 + F 90 -13.1 -3.60967 | overlap 216944 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 217022 - 217477 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 217481 - 218269 + | UDP-N-acetylglucosamine acyltransferase TERM 259 218303 - 218324 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG lpxB 218269 - 219417 + | lipid-A-disaccharide synthase TERM 260 219581 - 219570 - g 81 -7.2 -4.67011 | opp_overlap 219569 AAGCTGAGCGAAAAA CGCC GTCT GGCG CTCTATGAAGAGATC rnhB 219414 - 220010 + | ribonuclease HII dnaE 220047 - 223529 + | DNA polymerase III subunit alpha accA 223542 - 224501 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 261 224539 - 224568 + T 89 -9.3 -4.59109 | overlap 224541 GTCACTTCGGTGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 262 224541 - 224566 + T 100 -16.3 -3.90762 | overlap 224539 CACTTCGGTGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_0198 225896 - 224550 - | IS4 orf TERM 263 225886 - 225911 + g 73 -9.1 -3.61398 | opp_overlap 225886 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 264 225911 - 225886 - G 100 -9.8 -5.61596 | opp_overlap 225886 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 265 227035 - 227051 + G 76 -8 -4.27617 | CACTTCGATTCCGCC TGGGTG CCGTA CACCCA TTTTCATCCGATCTA ldcC 226039 - 228180 + | lysine decarboxylase 2, constitutive yaeR 228237 - 228626 + | hypothetical protein TERM 266 228646 - 228666 + F 83 -13.3 -3.24925 | TGTCATCGCCGCATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT tilS 228691 - 229989 + | tRNA(Ile)-lysidine synthetase TERM 267 230028 - 229996 - T 93 -12 -3.76952 | overlap 230016 CTTAGTTAAGTGAAA GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC GAAAGTCAATCAGGA yaeO 230298 - 230038 - | Rho-binding antiterminator yaeP 230485 - 230285 - | hypothetical protein TERM 268 230322 - 230335 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 269 230946 - 230933 - g 76 -8.1 -4.24342 | opp_overlap 230942 CGGCGGATTAAGAAA GCCTG CACC CAGGC CGCAAAAGTGGCGCT yaeQ 230651 - 231196 + | hypothetical protein cutF 231628 - 232338 + | lipoprotein involved with copper homeostasis and adhesion yaeF 233317 - 232493 - | hypothetical protein TERM 270 233340 - 233360 + r 87 -11.1 -3.89346 | opp_overlap 233340 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC TERM 271 233360 - 233340 - R 100 -13.3 -5.10497 | opp_overlap 233340 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 235088 - 233370 - | prolyl-tRNA synthetase TERM 272 235136 - 235118 - R 79 -11 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA yaeB 235906 - 235199 - | hypothetical protein TERM 273 235753 - 235778 + g 83 -12.6 -3.28924 | gap 1 AATGGCTGAACGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGGAGCAATG TERM 274 235803 - 235815 + g 70 -4.7 -4.56597 | overlap 235804 GCAATGAGATGCAGT TCGCC GTT GGCGC TTTTTACCAGACCAG rcsF 236307 - 235903 - | outer membrane lipoprotein TERM 275 236171 - 236181 + g 74 -8.2 -3.92659 | overlap 236164 236175 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 276 236392 - 236364 - R 74 -6 -4.58663 | gap 1, opp_overlap 236365, overlap 236367 236370 AGGAGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 277 236390 - 236367 - R 90 -14.6 -3.23975 | opp_overlap 236365, overlap 236364 236370 AGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 278 236387 - 236370 - R 93 -12.7 -3.75505 | opp_overlap 236365, overlap 236367 236364 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 237240 - 236425 - | DL-methionine transporter substrate-binding subunit yaeE 237933 - 237280 - | DL-methionine transporter permease subunit TERM 279 237873 - 237862 - G 79 -2.2 -5.24449 | CACAAAGCCAAAAAA TCCG GATA CGAA GGTCATTGCCAGCGT metN 238957 - 237926 - | DL-methionine transporter ATP-binding subunit TERM 280 238247 - 238257 + g 77 -8.2 -4.13767 | overlap 238255 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA yaeD 239145 - 239720 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 281 239871 - 239857 - f 86 -4.2 -5.47159 | opp_overlap 239857, overlap 239858 239865 GTTGAAGAGAAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 282 239870 - 239858 - f 71 -7.7 -3.87211 | opp_overlap 239857, overlap 239857 239865 TTGAAGAGAAAAAAT CCTGA AAT TCAGG GTTGACTCTGAAAGA TERM 283 239903 - 239891 - f 71 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 284 241950 - 241913 - f 93 -6.3 -5.68438 | opp_overlap 241915 241930, overlap 241915 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 285 241948 - 241915 - f 86 -8.9 -4.47052 | opp_overlap 241915 241930, overlap 241913 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 286 241915 - 241948 + F 75 -6.7 -4.49756 | opp_overlap 241913 241915, overlap 241930 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 287 242567 - 242555 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 288 245055 - 245034 - f 74 -8.7 -3.91196 | opp_overlap 245051 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 289 245454 - 245473 + F 100 -10 -5.92337 | opp_overlap 245454 245453 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGAGG TTTTTTTTCGTCTGT TERM 290 246368 - 246339 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 245604 - 246407 + | 2,5-diketo-D-gluconate reductase B TERM 291 246418 - 246435 + T 95 -11.3 -4.68593 | ATTAAGCCTCTCTGA CAGCTCC TCCG GGAGCTG TTTTTACATGCTCGC yafC 247318 - 246404 - | putative transcriptional regulator LYSR-type TERM 292 247529 - 247510 - H 82 -11.4 -3.54771 | opp_overlap 247494, overlap 247493 CCTATAACAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTAATAGAGG TERM 293 248224 - 248247 + G 82 -3.1 -5.18371 | overlap 248218 248219 248222 248224 CGATGATCAGCGCCG TCGGGCG TTTGGTCGCC CGCTCGA TTTTGTTTTCTACCG yafD 247559 - 248359 + | hypothetical protein TERM 294 248411 - 248391 - g 70 -9.7 -3.27022 | opp_overlap 248364, overlap 248364 CGCAGGGCAGACCAA CGTTTGGCG CTG CGCAAAACG TGAGCGCGGTGGTGG yafE 248363 - 248986 + | putative biotin synthesis protein TERM 295 248985 - 249025 + T 93 -15 -3.05997 | opp_overlap 248995, overlap 248995 CACATAAAGCGGCAT AAATAAAAAAGGCACCGG GGGAA TCGGTGCCTTTTTTATTA TCTGGTTTGTCAGGA TERM 296 248995 - 249015 + T 100 -10.4 -5.60689 | opp_overlap 248995, overlap 248985 GGCATAAATAAAAAA GGCACCGG GGGAA TCGGTGCC TTTTTTATTATCTGG TERM 297 249015 - 248995 - T 100 -9.7 -5.72622 | opp_overlap 248995 248985 GGCATAAATAAAAAA GGCACCG GGGGAAT CGGTGCC TTTTTTATTATCTGG dniR 250393 - 249035 - | membrane-bound lytic murein transglycosylase D TERM 298 249734 - 249771 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 249743, overlap 249743 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 299 249743 - 249763 + g 70 -4.6 -4.46669 | opp_overlap 249743, overlap 249734 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 251220 - 250465 - | hydroxyacylglutathione hydrolase TERM 300 250846 - 250834 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT yafS 251236 - 251976 + | hypothetical protein rnhA 252440 - 251973 - | ribonuclease H dnaQ 252505 - 253236 + | DNA polymerase III subunit epsilon TERM 301 253497 - 253475 - f 72 -9.2 -3.51137 | opp_overlap 253475 AATGAGTTCAGAGAA CCGCAAGATT TTT AATTTTGCGG TTTTTTTGCATTTAA TERM 302 253475 - 253497 + F 100 -11.4 -5.58209 | opp_overlap 253475 AATGAGTTCAGAGAA CCGCAAGATT TTT AATTTTGCGG TTTTTTTGCATTTAA TERM 303 254202 - 254214 + G 70 -5.5 -4.42386 | overlap 254203 AGAATATGAACTGGA TGCAG GCA CTGCG TTTTGTGGCTGCAAA TERM 304 254336 - 254326 - g 76 -4 -4.95155 | GTCAGATTATAAAAA TCAA AAA TTGA CTGACACGATGTCAC yafT 253775 - 254560 + | putative aminopeptidase TERM 305 255110 - 255100 - T 74 -5.4 -4.59882 | GTAAAAAACAAAGAA GCAT TGA ATGC AGGGAAAAATAATAT yafU 255524 - 255186 - | hypothetical protein TERM 306 255430 - 255418 - G 76 -7.7 -4.28375 | CTAACACAGGCAAAA GAAGC CAG GCTTC CAATAGCGGTTGCAA SSON_0233 256647 - 256165 - | Hcp-like protein SSON_0234 258023 - 256671 - | hypothetical protein TERM 307 257550 - 257562 + g 74 -10.5 -3.17723 | GAGCAGATTCTCCAC GCGCG GAA CGCGC TTCAGTTCCACCTGC SSON_0235 258720 - 258034 - | hypothetical protein SSON_0236 259932 - 258757 - | hypothetical protein TERM 308 259810 - 259827 + g 79 -4 -5.12068 | overlap 259812 CTCCAGCATTCGCAT CACGCG CAGCAC CGCGAG TTTTTCTTCACTCTC SSON_0237 260850 - 259945 - | insertion element IS2 transposase InsD SSON_0238 261173 - 260808 - | insertion sequence 2 OrfA protein SSON_0239 262894 - 261215 - | hypothetical protein TERM 309 261557 - 261541 - G 74 -5.8 -4.52589 | CTGTGGCAGAGAAAA CCGTCA GGCGG CGACGG GAACGTATCAGCCAG TERM 310 262132 - 262171 + g 91 -11.4 -4.05033 | gap 1, overlap 262133 GGCGTATATCCTGTA AGCGGCTGCGCAGCGTCTG TAA CAGATGCT-CGCGGCGGCG TTTGTCTGCGGTCAG TERM 311 262133 - 262170 + g 93 -14.9 -3.02698 | gap 1, overlap 262132 GCGTATATCCTGTAA GCGGCTGCGCAGCGTCTG TAA CAGATGCT-CGCGGCGGC GTTTGTCTGCGGTCA SSON_0240 264325 - 262913 - | hypothetical protein SSON_0241 265022 - 264330 - | hypothetical protein TERM 312 264513 - 264489 - G 80 -11.3 -3.31501 | opp_overlap 264487 264504, overlap 264480 ATCAATCCCGGATAA CCCCCGGCTGG ACT CCAGCAGGGTG CCGTTCTCGCGCACA TERM 313 264855 - 264802 - G 70 -5.1 -4.36914 | gap 1, opp_overlap 264764 264763, overlap 264804 GCCTCGCCCACAAAA CCGGCTTTGACCAGCG-CCCCGTCAA ACC CTGACGGGGACAGCGGTGCCAGCAGG CGGTCATAGCAGTCA SSON_0242 267529 - 265070 - | putative ATP-dependent Clp proteinase ATP-binding chain TERM 314 267511 - 267468 - G 90 -13 -3.48924 | gap 1, opp_overlap 267504, overlap 267503 GCAGGCGGTATATAA CGCAGCGGCG-AATGCAGCAG GGC CAGCAGCAACACGCCGCCGCG CAGTTCGCTGTGCTG SSON_0243 267847 - 267548 - | hypothetical protein SSON_0244 268617 - 267856 - | hypothetical protein TERM 315 268003 - 268013 + g 100 -4.6 -5.67967 | GATGAGCTGATAACG CCCG CCC TGGG TTTTTTTGTCCTGGT TERM 316 268453 - 268440 - G 85 -6.7 -4.7373 | opp_overlap 268433 CCACCTGAGCAAAAA GATGC TCCG GCATC GTCTGGCTGTTCATG SSON_0245 269410 - 268622 - | putative cytoplasmic protein SSON_0246 269912 - 269403 - | hypothetical protein TERM 317 269762 - 269727 - G 85 -8.2 -4.52589 | gap 1 GTCGGGGATAGAAAA GACGGTGCCGTCGGGCA GTG TGCCTGACG-CGCTGTC AATCATGATCTTACC SSON_0247 270478 - 269954 - | lipoprotein TERM 318 270373 - 270386 + g 81 -5.9 -4.7373 | CCTTCAGGCTCCCGA CCTGG ATAT CCGGG TTTTTGATCACCTCA SSON_0248 271755 - 270475 - | hypothetical protein TERM 319 271283 - 271271 - G 75 -4.8 -4.84359 | opp_overlap 271271 GGATCGGCAGAAAAA CCGT TTACC ACGG TGTCTGCAAGCTGGT SSON_0249 272862 - 271780 - | hypothetical protein TERM 320 272240 - 272257 + gr 72 -9.1 -3.54424 | opp_overlap 272239 AGGCCACAGATAATT TCCGGGG ATCG TCCCGGA TTTGCCAGGATCCCG SSON_0250 274676 - 272826 - | hypothetical protein TERM 321 274276 - 274290 + gr 81 -7.1 -4.62069 | AGGGTGAAGGTACAG GGAGG CGGCT CCTCC TTTTTAGCATCAGAG TERM 322 275076 - 275060 - R 72 -5.1 -4.61231 | opp_overlap 275062, overlap 275062 CCATACGCTCAAAAA GAGAACC TGT GGTTCTT TCCCGATCCGGTATC TERM 323 275074 - 275062 - R 71 -7.7 -3.91908 | opp_overlap 275062, overlap 275060 ATACGCTCAAAAAGA GAACC TGT GGTTC TTTCCCGATCCGGTA SSON_0251 275648 - 275100 - | hypothetical protein SSON_0252 276575 - 275685 - | putative cytoplasmic protein SSON_0253 276850 - 276626 - | hypothetical protein TERM 324 276693 - 276678 - G 76 -4 -4.94992 | opp_overlap 276692 TGAAACTCACAAAAA TGGATA ATCT CATCCA ATAGATCACTGATAC SSON_0254 277385 - 276885 - | hypothetical protein TERM 325 277782 - 277768 - H 74 -5.8 -4.66953 | GGAATATCTCAAAAA TTATCA AAA TGATAA TTCAGAAAGGATAAA SSON_0255 278082 - 278600 + | putative hemolysin co-regulated protein TERM 326 278638 - 278611 - f 100 -17.1 -3.21705 | opp_overlap 278611, overlap 278606 CATAAGTTAAGCCAA CAGCATCCGGC TATCAG GCCGGATGCTG TTTTTGTATTACGCC TERM 327 278611 - 278638 + F 100 -17.8 -5.0916 | opp_overlap 278611 278606 CATAAGTTAAGCCAA CAGCATCCGGCT ATCA GGCCGGATGCTG TTTTTGTATTACGCC TERM 328 279200 - 279190 - g 75 -6.8 -4.41494 | GATCCTGAAGGAAAA CGGT GTG ACCG AGTGGAGTCCGCTGT TERM 329 279361 - 279336 - g 74 -2.5 -5.03715 | gap 1, opp_overlap 279343 279356 279358, overlap 279339 279340 AGCACGCGCAAAAAA GTACCG-ACCAG AGC CTGGTCCTGTGC GACACCGTGCGTTAT vgrG 278810 - 280951 + | Rhs element protein TERM 330 281710 - 281724 + G 77 -8.5 -4.13945 | GACGGGGGTGACGGA CGGCG CGGGC CGCCG TTTTCACATGGCGCT SSON_0257 281027 - 285235 + | rhs core protein with extension SSON_0258 285247 - 285696 + | dsORF-h1 TERM 331 286327 - 286292 - g 84 -7.6 -4.68424 | gap 1, opp_overlap 286300 286304 286308 286317, overlap 286294 286314 286317 CAATTGATGGAAAAA CGCTCCGGC-ACTCTTA TGA CAAGAGTCGCCGCAGGG GAGCGATTCATGTCA ybfL 286237 - 287094 + | putative receptor protein TERM 332 288757 - 288722 - g 70 -4 -4.68424 | gap 1, opp_overlap 288730 288734 288738 288747, overlap 288724 288744 288747 CAATTGATGGAAAAA CGCTCCGGC-ACTCTTA TGA CAAGAGTCGCCGCAAGG GAGCGATTCATGTCA yhhI 288388 - 289524 + | putative receptor yafV 290336 - 289566 - | hypothetical protein TERM 333 290049 - 290029 - G 74 -3.1 -4.91109 | overlap 290033 CGCTTATCATAAAAA TGTACCGTG CCG CCCGGCTCA ACCAGCAAAAAGCGG ykfE 290490 - 290963 + | vertebrate C-lysozyme inhibitor TERM 334 290997 - 290980 - T 100 -12.7 -4.56367 | opp_overlap 290980 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG TERM 335 290980 - 290997 + T 93 -12.7 -3.73068 | opp_overlap 290980 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG fadE 293450 - 291006 - | acyl-CoA dehydrogenase TERM 336 293099 - 293118 + g 70 -4.2 -4.62069 | overlap 293083 CGGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 337 293927 - 293908 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 293908 293909, overlap 293909 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCTATTTCTGACG gmhA 293690 - 294268 + | phosphoheptose isomerase TERM 338 294279 - 294311 + F 73 -9.8 -3.34043 | gap 1, opp_overlap 294270 294289 294290, overlap 294279 294290 AGTAAGTCTGGCGTA G-GCCGGATAAGGCG TTTA CGCCGCATCCGGCAC TTGTGCGCTGATGCC TERM 339 295201 - 295180 - g 74 -8.7 -3.91084 | opp_overlap 295195 TGACGGGCAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGCGCTTATT yafJ 294474 - 295241 + | putative amidotransferase yafK 295952 - 295212 - | hypothetical protein yafQ 296386 - 296108 - | hypothetical protein dinJ 296649 - 296389 - | damage-inducible protein J TERM 340 296448 - 296458 + g 86 -6.8 -4.93547 | TATGAACATCAACGC CAGC TTC GCTG TTTTTGATTGATTGA yafL 296859 - 297608 + | putative lipoprotein SSON_0270 298400 - 297897 - | IS1 ORF yafM 298848 - 299345 + | hypothetical protein TERM 341 299480 - 299424 - Tf 70 -8.9 -3.30124 | opp_overlap 299414 299413 299436 299439 CGGTAGGCCGGATAA GGCGTTTACGC-CGCATCCGGCAGTTG TGCAC CAA-TGCCGGATACTTACATCAACGCC CCCATAATCTTCAAC fhiA 301207 - 299468 - | flagellar biosynthesis TERM 342 301178 - 301166 - Gg 72 -6.3 -4.35483 | GGTGACGACAATAAA GTTGA TTG TCAAC AGCGTCAGTAAATCC TERM 343 301809 - 301778 - gH 77 -5.8 -4.62069 | gap 1, opp_overlap 301779 301780, overlap 301786 GCTGGATTCCAAAAA TCCGCAAAGCGCGGG CAA CCGGCGCATTG-AGA TTATGGTGCTGACCA TERM 344 301802 - 301786 - gH 76 -9.3 -3.68853 | opp_overlap 301780 301779, overlap 301778 CCAAAAATCCGCAAA GCGCGGG CAA CCGGCGC ATTGAGATTATGGTG mbhA 301152 - 301937 + | hypothetical protein dinP 302008 - 303063 + | DNA polymerase IV yafP 303060 - 303512 + | hypothetical protein SSON_0277 305499 - 304303 - | ISSfl2 ORF TERM 345 305336 - 305361 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 305316, overlap 305322 305337 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 346 306086 - 306068 - H 73 -2.3 -5.26875 | overlap 306069 TTGCGAACGAAAAAA CGCTCCA CTCGC TGGCGCA TGGGGCTGGGCGTAA prfH 306456 - 306956 + | peptide chain release factor-like protein TERM 347 307000 - 306969 - T 100 -17.3 -3.86776 | TAATGAAGGATGAAA CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG CAAATCAAATAATTA pepD 308470 - 307013 - | aminoacyl-histidine dipeptidase TERM 348 307132 - 307153 + g 71 -2.2 -5.00616 | opp_overlap 307132 TTGGCCCGATAGAAA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGACC TERM 349 308068 - 308078 + g 72 -6.8 -4.25104 | GCACTTCCAGCGGGC CGTG AAC CACG TTTTCGTCAGCCAGA TERM 350 308451 - 308428 - G 90 -9 -4.57837 | gap 1, opp_overlap 308430 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG gpt 308731 - 309189 + | xanthine-guanine phosphoribosyltransferase TERM 351 309193 - 309223 + F 84 -7.4 -4.74103 | overlap 309196 TCCGGTCGCTAATCT TTTCAACGCCTGGC ACT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 352 309196 - 309220 + F 100 -17.9 -4.47888 | overlap 309193 GGTCGCTAATCTTTT CAACGCCTGGC ACT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 353 309806 - 309829 + G 72 -4.4 -4.70659 | overlap 309807 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 309281 - 310525 + | fermentation/respiration switch protein crl 310583 - 310984 + | DNA-binding transcriptional regulator Crl TERM 354 311016 - 310991 - T 82 -11.3 -3.64822 | gap 1, opp_overlap 310991, overlap 310992 ACGGCGTGAGTGAAA TGTGCCGGATGT ATC ACATCCGGCA-A TATCCATTAAAACTG TERM 355 311016 - 310992 - T 82 -12.9 -2.78679 | opp_overlap 310991, overlap 310991 CGGCGTGAGTGAAAT GTGCCGGATGT ATC ACATCCGGCAA TATCCATTAAAACTG phoE 312078 - 311023 - | outer membrane phosphoporin protein E TERM 356 311620 - 311640 + g 76 -9 -3.79519 | gap 1 GTCGGTGTTCCGATA CGTCGCCAG ACCG CTGGCG-CG TTTGGTCATAAAGTT proB 312366 - 313469 + | gamma-glutamyl kinase proA 313481 - 314734 + | gamma-glutamyl phosphate reductase TERM 357 314741 - 314795 + T 72 -8.4 -3.69437 | opp_overlap 314741, overlap 314794 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 358 314795 - 314741 - T 88 -8.4 -4.86731 | opp_overlap 314741 314794 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 359 315376 - 315388 + T 72 -4.7 -4.69962 | overlap 315377 CCCTTTTTAGTGGAT ACGCC TAC GGCGC TTATTTTTTGGTATA TERM 360 315995 - 315980 - T 79 -4 -5.26158 | TAAATAAAAAATAAA TAGCCA TAAA TAGCTA TAAATACATCTTAAT TERM 361 316366 - 316337 - T 77 -7.3 -4.46675 | opp_overlap 316321 316325, overlap 316338 ATTTAACATAATAAA TGTTATATGTGCT AAGG AACACATATAACG CCTTGAATTGATGTA TERM 362 316365 - 316338 - T 74 -10.8 -3.26921 | opp_overlap 316325, overlap 316337 TTTAACATAATAAAT GTTATATGTGCT AAGG AACACATATAAC GCCTTGAATTGATGT SSON_0287 317393 - 316680 - | IS600 ORF2 SSON_0288 317836 - 317534 - | IS600 ORF1 TERM 363 318216 - 318240 + H 73 -8 -4.053 | opp_overlap 318216 GTGCTATGTGACAAA TGGATGTAAC GAGAG GTTACATTCA TTTATCTGAAATGCT TERM 364 318411 - 318387 - H 82 -12.9 -2.77182 | overlap 318367 318384 GCTCACAGTGAACTA GGGGTAGGTCA TAG TGAACTACCCC CACAGAATTCTGTTA TERM 365 319573 - 319554 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 319536 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_0289 318588 - 319619 + | IS630 orf SSON_0290 320065 - 320568 + | IS1 ORF SSON_0291 320570 - 321541 + | hypothetical protein SSON_0292 321696 - 321998 + | IS600 ORF1 SSON_0293 322139 - 322852 + | IS600 ORF2 TERM 366 323019 - 322986 - T 71 -9.7 -3.14564 | opp_overlap 322988 323010, overlap 323010 GGATTCGTGCATTAA GATCCGATCGTGAAC CACT ATTAACGATCGAATC GCTTTTGCCCCAACC mhpB 324218 - 323274 - | 3-(2,3-dihydroxyphenyl)propionate dioxygenase mhpA 325884 - 324220 - | 3-(3-hydroxyphenyl)propionate hydroxylase lacI 326836 - 327918 + | lac repressor TERM 367 328215 - 328273 + G 85 -13.2 -3.13403 | gap 1 AGCCTGAATGGCGAA TGGCGCTTT-GCCTGGTTTCCGGCACC AGAAGC GGTGCCGGAAAGCTGGCTGGAGTGCGA TCTTCCTGAGGCCGA TERM 368 328386 - 328405 + G 79 -10 -3.73647 | gap 1 AATCCGCCTTTTGTT CCCG-CGGA GAA TCCGACGGG TTGTTACTCGCTCAC TERM 369 328599 - 328589 - g 93 -8.2 -5.00884 | ACGCGCCGGAAAAAA CCGC CTC GCGG TGATGGTGCTGCGCT TERM 370 328955 - 328934 - g 83 -10.1 -4.14392 | overlap 328935 TCTGAACGTCGAAAA CCCGGCGCT GTGG AGCGCCGAA ATCCCGAATCTCTAT TERM 371 328954 - 328935 - g 75 -11.4 -3.08314 | overlap 328934 CTGAACGTCGAAAAC CCGGCGCT GTGG AGCGCCGA AATCCCGAATCTCTA lacZ 328041 - 331115 + | beta-D-galactosidase TERM 372 331144 - 331122 - f 83 -9 -4.24569 | opp_overlap 331121 331123, overlap 331119 331123 CAAAAATAATAATAA CCGGGCAGGC CAT GTCTGCCCGT ATTTCGCGTAAGGAA TERM 373 331143 - 331123 - f 81 -12.5 -3.12301 | opp_overlap 331121 331123, overlap 331122 331119 AAAAATAATAATAAC CGGGCAGGC CAT GTCTGCCCG TATTTCGCGTAAGGA TERM 374 331123 - 331143 + F 93 -14.7 -3.38046 | opp_overlap 331123 331122 331119, overlap 331121 AAAAATAATAATAAC CGGGCAGGC CAT GTCTGCCCG TATTTCGCGTAAGGA SSON_0301 331686 - 332189 + | IS1 ORF yahN 332229 - 332861 + | putative cytochrome subunit of dehydrogenase yahM 333153 - 332878 - | hypothetical protein TERM 375 332988 - 333009 + g 95 -7.2 -5.31059 | TAGCTTCCCATTTCA GCCCACTC TCCCCT GTGTGGGC TTTTTTCATTGGTCT SSON_0304 333438 - 333740 + | IS600 ORF1 SSON_0305 333881 - 334594 + | IS600 ORF2 TERM 376 334635 - 334650 + T 72 -3.2 -5.00884 | overlap 334636 TATTGCCAGTACACC TCACCA CTGC TGGTGC TTTTTTAAGCGAAGT yahL 335618 - 334803 - | hypothetical protein TERM 377 335785 - 335824 + r 70 -8.9 -3.37493 | gap 2, opp_overlap 335785, overlap 335786 GCTACTTTGATATTA TTTCGCTCT-C-CTTAACT AAAA AGTTAAGTGGAGAGCGAAG TTAATATGTTAAACC TERM 378 335786 - 335823 + r 71 -10.2 -2.62175 | gap 2, opp_overlap 335785, overlap 335785 CTACTTTGATATTAT TTCGCTCT-C-CTTAACT AAAA AGTTAAGTGGAGAGCGAA GTTAATATGTTAAAC SSON_0307 336364 - 335861 - | IS1 ORF yahK 337687 - 336638 - | putative oxidoreductase TERM 379 337032 - 337042 + g 88 -8.2 -4.66833 | TTAACAACTTCATCG GCCC CCA GGGC TTTTTCCGCTTCGCG yahJ 339446 - 338064 - | deaminase TERM 380 338846 - 338862 + g 80 -5.1 -5.00616 | overlap 338847 GCCGCGCCAGCACCG CCTGCAA ATT TTGCAGA TTTTTTAGGCCGGAA yahI 340406 - 339456 - | putative carbamate kinase yahG 341907 - 340549 - | hypothetical protein yahF 343454 - 341907 - | putative oxidoreductase subunit TERM 381 343150 - 343181 + g 86 -10.8 -3.92324 | opp_overlap 343147 GCGCTGGCAATAGTG GCGTAACGCGCCTC GTGC GAGCCGCTTTGCGC TTTGGTGTTGAACAG TERM 382 343359 - 343373 + g 90 -10 -4.41616 | CGCCACAAATGCCTG CTCGAC GCC GTCGAG TTTATTTGCACGCGT yahE 344307 - 343444 - | hypothetical protein TERM 383 344401 - 344417 + H 72 -6.5 -4.2243 | overlap 344413 AAAGCCCCGTTCCCG CGCCAGT TCC AGTGGCG TTTTGCCATATTTAT SSON_0315 344839 - 345342 + | IS1 ORF ykgG 346157 - 345462 - | putative transporter ykgF 347577 - 346150 - | hypothetical protein TERM 384 347329 - 347349 + g 71 -3.3 -4.83615 | gap 1, opp_overlap 347326 TTTTGCAAACCAGAC GTGACCGC CGTTTT GCG-TCAC TTTTTCTGAGAGCTG ykgE 348307 - 347588 - | putative dehydrogenase subunit ykgD 349689 - 348835 - | putative ARAC-type regulatory protein TERM 385 350480 - 350490 + G 81 -6.8 -4.65895 | opp_overlap 350479 350480 TAACCATTTTAGAAG CAGC TTC GCTG TTTTTGCCTCGGGAA ykgC 349915 - 351240 + | pyridine nucleotide-disulfide oxidoreductase TERM 386 351280 - 351249 - f 100 -12.4 -4.45261 | overlap 351252 351269 CAAATAAACTCAAAA TCAGACGCCAGAAC AAAT ATTCTGGCGTCTCA GAGAAAAGAATCTTA TERM 387 351277 - 351252 - f 86 -14.1 -3.16695 | overlap 351249 351269 ATAAACTCAAAATCA GACGCCAGAAC AAAT ATTCTGGCGTC TCAGAGAAAAGAATC ykgI 351334 - 351585 + | hypothetical protein ykgB 351588 - 352190 + | hypothetical protein SSON_0323 353186 - 352350 - | putative dehydrogenase SSON_0324 354385 - 353480 - | insertion element IS2 transposase InsD SSON_0325 354708 - 354343 - | insertion sequence 2 OrfA protein SSON_0326 355466 - 354753 - | IS600 ORF2 SSON_0327 355909 - 355607 - | IS600 ORF1 TERM 388 356370 - 356382 + H 77 -10.5 -3.33671 | GTCTGCGTCTGCTGT CCGGC ATT GCCGG TTCTGAACTGCATAT TERM 389 357051 - 357031 - g 70 -4 -4.64766 | gap 1, overlap 357032 357033 GTTAGACCTGAAAAA CTGCGCCAT GAAG ATGACGC-G TAATAACGAAGAGGT mhpD 356492 - 357301 + | 2-keto-4-pentenoate hydratase TERM 390 357582 - 357555 - g 70 -4.1 -4.62069 | opp_overlap 357559 357560 357574, overlap 357559 CGCGCATGTGAAAAA CGATGCCGCTT TACGCG AAGCGAAACCG GATATTCGCTTAATT TERM 391 357728 - 357742 + G 80 -11.4 -3.33696 | TGGTGGCGGCAGTTT CACGCG TGG CGCGTG TTCATTACGCCGAAA TERM 392 358228 - 358208 - g 74 -2.6 -5.07567 | gap 2, overlap 358210 CGACAGCGGAAAAAA TG-GC-CCAG TCA CTGGCGCGCA AGGCAGGAGAAGCGG mhpF 357298 - 358248 + | acetaldehyde dehydrogenase mhpE 358245 - 359258 + | 4-hydroxy-2-ketovalerate aldolase TERM 393 359373 - 359428 + F 79 -11.2 -3.30243 | gap 1, opp_overlap 359371 359373 359374, overlap 359374 359403 359404 359407 GTAGGTCTGATAAGA CGCGTTAGCGTCGCATCAGGCA-TC TGCGCAC GACTGCCGGATGCGGCGTGAACGCC TTATCCGGCCTACAT TERM 394 359374 - 359427 + F 86 -14.7 -2.57931 | gap 1, opp_overlap 359371 359374 359373, overlap 359373 359403 359404 359407 TAGGTCTGATAAGAC GCGTTAGCGTCGCATCAGGCA-TC TGCGCAC GACTGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA TERM 395 359427 - 359374 - f 70 -10.3 -2.5294 | gap 1, opp_overlap 359373 359374 359403 359404 359407, overlap 359371 359373 TAGGTCTGATAAGAC GCGTTAGCGTCGCATCAGGCA-TC TGCGCAC GACTGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA TERM 396 359407 - 359438 + F 78 -12.2 -2.66451 | opp_overlap 359374 359373, overlap 359374 359373 359404 359403 GCATCTGCGCACGAC TGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACATTTCGCTACAT TERM 397 359579 - 359599 + G 95 -9 -5.0917 | CATCATCTTCATCCC GCCTGATG CTGAC CATCGGGC TTTGTTTTTTGGTCG TERM 398 359989 - 360020 + G 74 -10 -3.53012 | overlap 359984 ATGTATTGCGGTGTT CCCATTGGCGCGGC GCTG GCGGCGACACTGGG TTTCGCGGGGGCAAA TERM 399 360076 - 360124 + G 70 -6.1 -4.18018 | gap 2, overlap 360103 GTAGGTGGTGTGGTG CCGTTGATTCTGGT-GCC-GC TATTAATGC GCTGGCTGCCGGAGTCAGCGG TTTTCGCTGGCGAAA mhpT 359545 - 360756 + | putative 3-hydroxyphenylpropionic transporter MhpT TERM 400 360967 - 360948 - g 81 -4.9 -5.06103 | overlap 360937 360949 AGAACGGCGAAAAAA TCGCGCG TTCAGG CGCGTGA AGCTCGGGCTGCGGT yaiL 360858 - 361397 + | nucleoprotein/polynucleotide-associated enzyme yaiM 362456 - 361623 - | putative esterase TERM 401 362414 - 362438 + g 70 -3.5 -4.68424 | overlap 362416 AATGCCGATACACAT TTTGCCAGC CGCCAAA GCTGGCATG TTTTTCAATGAGTTC TERM 402 362416 - 362436 + g 74 -8.3 -3.95214 | overlap 362414 TGCCGATACACATTT TGCCAGC CGCCAAA GCTGGCA TGTTTTTCAATGAGT TERM 403 362533 - 362513 - R 79 -9.7 -3.76482 | GGAGAGTATTAAGAA CCCCGTC TGAAGTG GACGGGG TATACCTGCGGGAAA adhC 363658 - 362549 - | alcohol dehydrogenase class III yaiN 363989 - 363693 - | regulator protein FrmR TERM 404 364044 - 363994 - R 100 -21 -3.06302 | gap 1, opp_overlap 363998 364003, overlap 363996 363998 ATCATCTGCACGCAA TATACTATAGGGAGGTATGCTAT ATGTCA AT-GCATACCTCCCTATAGTATA TAACGCTGGAGAATA TERM 405 364042 - 363996 - R 100 -19.2 -3.08996 | gap 1, opp_overlap 363998 364003, overlap 363994 363998 CATCTGCACGCAATA TACTATAGGGAGGTATGCTAT ATGTCA AT-GCATACCTCCCTATAGTA TATAACGCTGGAGAA TERM 406 364040 - 363998 - R 100 -17.4 -3.10344 | gap 1, opp_overlap 363998 364003, overlap 363996 363994 TCTGCACGCAATATA CTATAGGGAGGTATGCTAT ATGTCA AT-GCATACCTCCCTATAG TATATAACGCTGGAG TERM 407 363998 - 364040 + r 100 -17.4 -2.88544 | gap 1, opp_overlap 363996 363994 363998, overlap 364003 TCTGCACGCAATATA CTATAGGGAGGTATGCTAT ATGTCA AT-GCATACCTCCCTATAG TATATAACGCTGGAG TERM 408 364003 - 364035 + r 74 -11.5 -2.88999 | gap 1, opp_overlap 363998 363996 363994, overlap 363998 ACGCAATATACTATA GGGAGGTATGCTAT ATGTCA AT-GCATACCTCCC TATAGTATATAACGC yaiO 364929 - 364156 - | hypothetical protein SSON_0338 365491 - 364931 - | putative transferase TERM 409 366362 - 366351 - R 88 -5.8 -5.48825 | CATCACTTAAAAAAA CCTG GTCG CAGG TGGCATAATTGAGGC TERM 410 366659 - 366640 - R 93 -10.8 -4.66609 | TAGCGTACTTAAAAA CCATAGCA ACAT TGCTATGG ACATACAGATAAATA yaiS 367368 - 366697 - | hypothetical protein TERM 411 367307 - 367322 + g 71 -3.2 -4.86731 | opp_overlap 367307 367316 GGATGTGCGCCAATA GCAAGG ATAC CCTTTC TTTTATTTGCCGAAG TERM 412 367431 - 367445 + r 73 -10 -3.38317 | opp_overlap 367412 367409 367429, overlap 367430 367425 CTCAGAGACGTAATC TCTGGC GCA GCCAGA TGTTAATTTATAAAT SSON_0341 368773 - 367868 - | insertion element IS2 transposase InsD SSON_0342 369096 - 368731 - | insertion sequence 2 OrfA protein tauA 369314 - 370276 + | taurine transporter substrate binding subunit TERM 413 370617 - 370596 - g 77 -5.9 -4.61868 | gap 1, overlap 370600 CAGGTATAGAGAAAA TGCAGCGACT GGA AATCGC-GCA CCAGATGCTGAAAAA TERM 414 370694 - 370735 + G 84 -10.8 -3.71848 | GGTGGTCAACGTCAG CGGGTGGGGATTGCCCGC GCGCTG GCGGCGAATCCCCAGCTG TTATTACTCGACGAA tauB 370289 - 371056 + | taurine transporter ATP-binding subunit TERM 415 371714 - 371726 + G 84 -10.5 -3.74749 | CGGCGGAGCTGATTG CCGCG ACA CGCGG TTTAGGATTTATGGT TERM 416 371781 - 371811 + G 88 -8.2 -4.65933 | GACTGACGTGGTACT GGCGGGGATCGCGG TGA TTGCGATTATCGCC TTTCTTTTAGAACTG tauC 371053 - 371880 + | taurine transporter subunit TERM 417 372052 - 372064 + G 81 -9.1 -4.08767 | CGCAGCAGCAACGCG CGCTG GCC CAGCG TTTTGGCGAACTGCA TERM 418 372534 - 372545 + G 86 -5.8 -5.06816 | opp_overlap 372534 GAGAAAGAGAGCGAA GCCT TGTT AGGC TTTTTATTCGCCCAT tauD 371877 - 372728 + | taurine dioxygenase hemB 373841 - 372834 - | delta-aminolevulinic acid dehydratase SSON_0348 374250 - 373978 - | hypothetical protein yaiU 374335 - 377223 + | flagellar protein TERM 419 377293 - 377264 - f 100 -18.1 -3.78409 | opp_overlap 377267, overlap 377267 GTAATTTAATCTAAA TAATGCCCGTCAA GGAT TTGACGGGCATTA CTGCAAAGGACGCGC TERM 420 377267 - 377290 + G 100 -15.4 -3.14132 | opp_overlap 377264 377267 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 421 377290 - 377267 - g 100 -15.4 -4.01381 | opp_overlap 377267, overlap 377264 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 422 377925 - 377889 - g 82 -11.8 -3.55866 | gap 1, opp_overlap 377901, overlap 377893 CTATATCGAAATGAA TAAAGGCAAACTGGTCG CTAT CAACC-GTTTGCCTTCA GAGTATTAATCAGGA TERM 423 377921 - 377893 - g 90 -10.4 -4.40298 | gap 1, opp_overlap 377901, overlap 377889 ATCGAAATGAATAAA GGCAAACTGGTCG CTAT CAACC-GTTTGCC TTCAGAGTATTAATC yaiV 377266 - 377934 + | putative DNA-binding transcriptional regulator TERM 424 377942 - 377969 + T 75 -11.4 -3.07816 | gap 1 AGTATTAATCAGGAT GCGGGGAT-AACC AAC GGTTTATTCCCGC TTAGCTCGGTCACCA yaiH 379092 - 377935 - | beta-lactamase/D-alanine carboxypeptidase sbmA 379444 - 380664 + | transport protein yaiW 380677 - 381771 + | hypothetical protein SSON_0354 382138 - 381830 - | hypothetical protein TERM 425 381911 - 381899 - G 81 -6.2 -4.7373 | GCAGCCTACTAAAAA CGGG ATCAG CCCG AAAATGGTGCCGACA TERM 426 382080 - 382052 - G 77 -8.2 -4.13711 | gap 1, overlap 382055 GCAAAACAGCACAAA CAACGCATAGGCA ATGT TGCC-AGGCGTTG AAGAGGCATTGCGAT SSON_0355 382266 - 382610 + | hypothetical protein TERM 427 382625 - 382601 - T 93 -10.8 -4.42851 | TGAAGAAACTGAAAA CGCCCAATAA GAATA TTATCGGGCG TTAAAATATTACATT ddl 383728 - 382634 - | D-alanyl-alanine synthetase A TERM 428 382833 - 382820 - G 70 -4.5 -4.56597 | CTCTGGGGTTAAAAA CACGT CTAC ACGCG CCATGCCTGCGCATC TERM 429 383618 - 383628 + g 75 -6.8 -4.42653 | opp_overlap 383618 383617 GCCCAGCAGCACAAC GTCG AAG CGAC TTTTATCAATGGCAT yaiB 384191 - 384451 + | hypothetical protein TERM 430 384494 - 384508 + G 84 -4.2 -5.21459 | overlap 384485 384496 AAAGTTGTCACGGCC GAGACT TAT AGTCGC TTTGTTTTTATTTTT TERM 431 384795 - 384827 + G 77 -3.3 -5.04385 | GATTCGGAAATTACT GCCGCACGTAATT ATGCCGA AGGTGCGGGCGGC TTTTTTAAAGGTATC phoA 384483 - 385967 + | alkaline phosphatase TERM 432 386004 - 385970 - f 80 -6.3 -4.86731 | gap 1, opp_overlap 385972 385973 386003, overlap 385965 385971 385972 GGGGCTGAAATAAAA CCGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-GT TTTTTTGCTGTTAGC TERM 433 386003 - 385971 - f 75 -9.8 -3.51557 | gap 1, opp_overlap 385972 385973, overlap 385970 385965 385972 GGGCTGAAATAAAAC CGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-G TTTTTTTGCTGTTAG TERM 434 385972 - 386003 + F 100 -14.4 -5.63374 | opp_overlap 385971 385970 385965 385972, overlap 385973 GGCTGAAATAAAACC GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG TTTTTTTGCTGTTAG TERM 435 385973 - 386002 + F 100 -17.9 -3.96398 | opp_overlap 385971 385972 385970 385965, overlap 385972 GCTGAAATAAAACCG CGCCCGGCAGTGA ATTT TCGCTGCCGGGTG GTTTTTTTGCTGTTA psiF 386068 - 386406 + | hypothetical protein TERM 436 386420 - 386453 + F 95 -11.7 -3.86944 | GATACCTGATAGTGC TAACGGGTGAGCTAC GAAA GTGGCTCACCCGAAA TTTCATACTTCTGCC TERM 437 386909 - 386931 + G 86 -12.7 -3.5241 | overlap 386917 386922 386924 TATGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 438 386917 - 386933 + G 81 -10.1 -3.87373 | overlap 386909 386922 386924 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG yaiC 386508 - 387359 + | hypothetical protein SSON_0361 387873 - 387370 - | IS1 ORF TERM 439 388215 - 388175 - R 93 -9.9 -4.65182 | gap 3 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC GAAAGTCATCAGGAT proC 389033 - 388224 - | pyrroline-5-carboxylate reductase yaiI 389153 - 389611 + | hypothetical protein TERM 440 389677 - 389693 + F 89 -5.9 -5.64421 | GGGATGTATTGAGAT TTTCACT TTA AGTGGAA TTTTTTCTTTACAAT aroL 389794 - 390318 + | shikimate kinase II yaiA 390368 - 390559 + | hypothetical protein aroM 390817 - 391494 + | hypothetical protein yaiE 391566 - 391850 + | hypothetical protein TERM 441 391856 - 391880 + F 80 -6.3 -4.8667 | overlap 391857 391872 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATATC TERM 442 391857 - 391879 + F 75 -9.8 -3.51279 | overlap 391856 391872 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATAT TERM 443 392006 - 391981 - f 72 -9.1 -3.61398 | opp_overlap 391981 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 444 391981 - 392006 + F 100 -9.8 -5.61596 | opp_overlap 391981 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_0368 391996 - 393342 + | IS4 orf TERM 445 393353 - 393324 - f 89 -9.3 -4.59109 | opp_overlap 393325 393326, overlap 393326 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TATTCCTTTGCTGCG TERM 446 393325 - 393352 + F 95 -12.8 -3.91541 | opp_overlap 393324 393326, overlap 393326 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTATTCCTTTGCTGC TERM 447 393326 - 393351 + F 93 -16.3 -2.94202 | opp_overlap 393326 393324, overlap 393325 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTATTCCTTTGCTG TERM 448 393351 - 393326 - f 100 -16.3 -3.90762 | opp_overlap 393325 393326, overlap 393324 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTATTCCTTTGCTG SSON_0369 393496 - 393777 + | hypothetical protein SSON_0370 393774 - 394229 + | hypothetical protein rdgC 395218 - 394307 - | recombination associated protein TERM 449 394768 - 394780 + g 77 -3.3 -5.03314 | overlap 394753 TACGCAGTAATGCCA GCGTA TCT TCCGC TTTTTTGGCACTGGC yajF 395343 - 396251 + | fructokinase TERM 450 396298 - 396256 - T 85 -5.5 -5.30189 | gap 1, opp_overlap 396256 396254, overlap 396260 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCCG-CG TCTTATCAGGCCTAC TERM 451 396256 - 396298 + T 71 -9.9 -3.21924 | gap 1, opp_overlap 396256 396260, overlap 396254 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC-GCG TCTTATCAGGCCTAC TERM 452 396295 - 396260 - T 73 -10.4 -2.949 | opp_overlap 396256 396254, overlap 396256 AGAGTAAAAAACGTA GGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC GCGTCTTATCAGGCC araJ 397578 - 396394 - | protein AraJ TERM 453 396618 - 396628 + g 77 -8.2 -4.13945 | CACCTAATAACTCTC CGCC TTT GGCG TTTTGCAGTAACAAT TERM 454 397112 - 397102 - G 74 -2.4 -5.14163 | AGCGATCAATAAAAA GGTG TAA CGCC AGCTAAATTCCTGAC TERM 455 397174 - 397215 + g 78 -9.4 -3.96337 | gap 1, opp_overlap 397182 397183 397185, overlap 397184 ATTGGCGACTGTCAT CCCGGAAACCATCCCCGCC ACGGC GGCGGTGACT-TTTCCGGG TTTGATAATTTTTGA TERM 456 397270 - 397258 - G 77 -3.3 -5.0538 | GCCGACGCCAAAAAA TGCGC CAT GCGGA AAGCCGGAAACCAGG sbcC 400847 - 397704 - | exonuclease subunit SbcC TERM 457 398054 - 398068 + g 73 -11.4 -2.77962 | overlap 398053 CAACAACCTCGACTT CCAGCG CCT CGCTGG CTTTGCGCTGTAACA TERM 458 400001 - 400022 + g 87 -5 -5.29445 | opp_overlap 400001 GTTGTGCCAGACTAA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 402046 - 400844 - | exonuclease subunit SbcD TERM 459 401453 - 401469 + g 70 -6.5 -4.25104 | opp_overlap 401452 401448 401453 CGTGCCAATATAAAT GTCACGC ACA GCGTCAC TTTTACTGGCCCCCA phoB 402236 - 402925 + | transcriptional regulator PhoB TERM 460 403034 - 403060 + G 82 -2.8 -5.28481 | overlap 403032 403048 GAGCTGCTACTTTGC TGCCTCCCGGCT TTC ATCCTGGGTGCA TTTTTTGGTTACCTG phoR 402983 - 404278 + | phosphate regulon sensor protein TERM 461 404305 - 404326 + F 100 -9.5 -4.88918 | opp_overlap 404308 CATCTTTTATTGCCA TAAGCCAGT CGAT GCTGGCTTA TTTTCTTTGCAGTCA TERM 462 404958 - 404970 + G 72 -6.9 -4.18018 | ACGGTTTGTTACCTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 404685 - 406004 + | branched chain amino acid transport system II carrier protein TERM 463 406026 - 406049 + F 100 -15.3 -5.64304 | opp_overlap 406029 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 406080 - 407453 + | putative proline-specific permease TERM 464 407470 - 407498 + F 88 -14.6 -3.03338 | overlap 407460 CCTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT malZ 407609 - 409426 + | maltodextrin glucosidase yajB 410012 - 409431 - | acyl carrier protein phosphodiesterase TERM 465 410418 - 410402 - g 74 -10.1 -3.53091 | overlap 410411 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGCTGCTGGG TERM 466 410641 - 410621 - g 72 -4.6 -4.70659 | gap 1, opp_overlap 410632, overlap 410622 410623 GTTTATAGCGAAAAA CCGGGC-GC GGTT GCAGCCCCG ACCGCAGGTCTGCAT TERM 467 410632 - 410655 + G 70 -6.6 -4.0896 | opp_overlap 410623 410621 410622, overlap 410641 AAAACCGGGCGCGGT TGCAGCCCCG ACCG CAGGTCTGCA TTTTGACGAACCTTT TERM 468 410924 - 410914 - g 72 -5.4 -4.57569 | TCAGGCGGCGAAAAA CGAT CTT ATCG AACCGTTCTTTGACG queA 410105 - 411175 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 469 411294 - 411310 + G 70 -5.1 -4.33785 | overlap 411291 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 411231 - 412358 + | queuine tRNA-ribosyltransferase yajC 412381 - 412713 + | preprotein translocase subunit YajC TERM 470 413302 - 413256 - g 73 -3.8 -4.86731 | opp_overlap 413296, overlap 413259 413260 413262 TGTTCGTAAAGAAAA CAACTACG-GCCTGAGCATCAC TTTCC GCGATGCTAAAGCTCGT-GATG AAGCCATTGCGTATC TERM 471 413835 - 413820 - g 71 -9 -3.54029 | CTTCACCAAGGACAA CATCGG CAAA CCGATG GCAACCCTGTTTGTG secD 412741 - 414588 + | preprotein translocase subunit SecD secF 414599 - 415570 + | preprotein translocase subunit SecF TERM 472 415614 - 415595 - f 73 -7.8 -4.11216 | opp_overlap 415595 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT TERM 473 415595 - 415614 + F 100 -10 -5.92337 | opp_overlap 415595 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT yajD 415699 - 416046 + | hypothetical protein TERM 474 416213 - 416193 - T 95 -12.6 -4.14257 | opp_overlap 416193 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA TERM 475 416193 - 416213 + T 95 -12.6 -4.30576 | opp_overlap 416193 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA tsx 417107 - 416223 - | nucleoside channel yajI 417945 - 417406 - | hypothetical protein TERM 476 417741 - 417784 + g 76 -7.4 -4.29396 | opp_overlap 417757, overlap 417739 417773 417774 CCGGTGTTTTCGCTC CAGGCAGAAGGTAAACCCCA CTGC TGGATTTTGCATTCAGCCTG TTTTGCTGAGTGATT TERM 477 417838 - 417853 + g 71 -9 -3.53018 | overlap 417822 417836 CGTCATCTCCTGGTT CAGCGT GCTG ACGCTG TGTTTCATCTGTCGC ybaD 418096 - 418545 + | transcriptional regulator NrdR ribD 418549 - 419652 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 478 420165 - 420149 - g 70 -6.5 -4.17132 | overlap 420150 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACCGCGCTTGAAAT ribH 419741 - 420211 + | riboflavin synthase subunit beta TERM 479 420365 - 420354 - g 70 -5.8 -4.23723 | opp_overlap 420342 420339, overlap 420344 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 480 420502 - 420477 - g 76 -3.9 -4.89852 | gap 1, overlap 420478 420480 GGACAGGTAGAAAAA GCAGTACTGCGC ATT GCGCTGTAC-GA ACTGTCTAAACGTAG TERM 481 420500 - 420480 - g 76 -11.1 -3.32986 | overlap 420478 420477 CAGGTAGAAAAAGCA GTACTGCGC ATT GCGCTGTAC GAACTGTCTAAACGT nusB 420231 - 420650 + | transcription antitermination protein NusB TERM 482 420657 - 420697 + F 83 -4.1 -5.43553 | gap 2 AAAAAGTGATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCATG-ATC-GTCGGCC TTTTCTTTTTTACCT TERM 483 421434 - 421447 + G 70 -4.5 -4.47328 | overlap 421435 GCGCACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT TERM 484 421646 - 421666 + G 73 -9 -3.64703 | GGGCTTTGTTTTATT CGTGACGG CGAAC CTGTCACG TTTGACTGGAAAGGA thiL 420728 - 421705 + | thiamine monophosphate kinase TERM 485 421801 - 421823 + G 78 -10.6 -3.50492 | opp_overlap 421780, overlap 421802 TCGTTCCTGGCACGA TGGGATCGCT GGC AGCGATTCCG TTCTGGTATCTGATG TERM 486 421802 - 421822 + G 73 -11.9 -2.69813 | opp_overlap 421780, overlap 421801 CGTTCCTGGCACGAT GGGATCGCT GGC AGCGATTCC GTTCTGGTATCTGAT pgpA 421683 - 422201 + | phosphatidylglycerophosphatase A yajO 423229 - 422255 - | putative NAD(P)H-dependent xylose reductase TERM 487 422703 - 422713 + g 86 -6.8 -4.91712 | CTGATAAACTGCGCC CAGC CGT GCTG TTTTTGTAGCTTCAG dxs 425146 - 423284 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 488 423457 - 423470 + g 78 -5.2 -4.78237 | CGCCGCTGCCTGCGC CGCC CATAAT GGCG TTTTCTTCTACGGTG TERM 489 423660 - 423673 + g 70 -4.5 -4.56775 | overlap 423661 CGCTTCACAATGCCT TTGCC AATT GGCAG TTTTTCCAGCGGCGT ispA 426070 - 425171 - | geranyltranstransferase xseB 426312 - 426070 - | exodeoxyribonuclease VII small subunit yajK 426518 - 427966 + | thiamine biosynthesis protein ThiI TERM 490 427980 - 428003 + T 100 -15.4 -3.55444 | AATTTGTGGTTTTTA CGTCGCATCT GGTC AGATGCGACG TTTGCCGCATCCGAC thiJ 428616 - 428020 - | hypothetical protein apbA 429484 - 428573 - | 2-dehydropantoate 2-reductase TERM 491 429578 - 429524 - H 75 -9.7 -3.61398 | gap 2, opp_overlap 429521 429566 429570 429575, overlap 429525 429573 CCGGGTGTTCAATAA GGC-TATCCCTTAATTGTGCAT-GC TGTTGTG ACTATGCACAATTAAGGGATACGTC CTGGTGCAGGACTGT TERM 492 429575 - 429525 - H 74 -10.9 -2.76696 | opp_overlap 429521 429566 429570, overlap 429524 429573 CGGGTGTTCAATAAG GCTATCCCTTAATTGTGCAT-GC TGTTGTG ACTATGCACAATTAAGGGATA-C GTCCTGGTGCAGGAC yajQ 429652 - 430143 + | nucleotide-binding protein yajR 431641 - 430271 - | putative transport protein TERM 493 431465 - 431449 - G 77 -6.5 -4.67234 | overlap 431450 ACGGAATCTGAAAAA CGGCCTG AGT CAGACCA TAAATACCAATGGCA TERM 494 431564 - 431552 - G 74 -7.7 -4.1021 | overlap 431554 CGGCAGAACCATAAA CATGC CCA GCATG CGCAACGAGAATACG SSON_0405 431948 - 432451 + | IS1 ORF TERM 495 432530 - 432548 + F 73 -10.4 -3.10493 | CAGGTATGTTTTTTT GCATTCAT AAA ATGAATGC TCTATATGTTGAAAA TERM 496 433045 - 433033 - g 72 -7.7 -3.86202 | CGTTATGATACCAAA CCTGA TGT TCAGG AAGCGATTAAATGGT SSON_0406 432760 - 433224 + | hypothetical protein SSON_0407 433738 - 433235 - | IS1 ORF TERM 497 434152 - 434132 - g 80 -5.3 -4.99035 | opp_overlap 434132, overlap 434144 TGATTGACAGAAAAA CGGTTGACG ATA CGTTACCCG TGATTACGGTTACCC TERM 498 434476 - 434456 - g 74 -9.7 -3.47227 | overlap 434450 CTGTAAGGACCACAA TCGTTGCCG CAA CGGCAACCA TTAACGGCAAGGATG SSON_0408 433990 - 434532 + | hypothetical protein SSON_0409 435130 - 434588 - | putative acetyltransferase SSON_0410 435473 - 435114 - | hypothetical protein TERM 499 435596 - 435569 - R 75 -10 -3.50393 | opp_overlap 435576 435588, overlap 435576 TCTGATCTCAGACAA TAAAAAAGGTGC CGTA GCACCTTTTTAA TAGAGAGGTTGTGTT TERM 500 435589 - 435576 - R 100 -8.1 -5.60689 | opp_overlap 435576 435588, overlap 435569 TCAGACAATAAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG TERM 501 435576 - 435589 + r 84 -8.1 -4.72272 | opp_overlap 435576 435569, overlap 435588 TCAGACAATAAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG cyoE 436500 - 435610 - | protoheme IX farnesyltransferase TERM 502 436421 - 436401 - G 74 -9.7 -3.45386 | overlap 436389 ACAGGGGATAATCAA TGCTGCCCT TTG AGGCCAGCA GGAATCCCCCAATCA cyoD 436841 - 436512 - | cytochrome o ubiquinol oxidase subunit IV cyoC 437455 - 436841 - | cytochrome o ubiquinol oxidase subunit III TERM 503 437168 - 437138 - G 72 -7.5 -4.00042 | opp_overlap 437152 TCCGGCACCAAACAA CCAGGTCAACGCC AGCCA GGAGATAACCTGG CTTTTGTTGTTTTTG TERM 504 437152 - 437169 + g 100 -8.4 -5.18715 | opp_overlap 437138 ACCAGGTCAACGCCA GCCAGG AGATAA CCTGGC TTTTGTTGTTTTTGT cyoB 439436 - 437445 - | cytochrome o ubiquinol oxidase subunit I TERM 505 437482 - 437509 + g 76 -9.2 -3.85698 | opp_overlap 437489, overlap 437490 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 506 437490 - 437501 + g 81 -5.8 -4.84529 | opp_overlap 437489, overlap 437482 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC cyoA 440405 - 439458 - | cytochrome o ubiquinol oxidase subunit II TERM 507 440810 - 440856 + r 77 -10.5 -3.38314 | overlap 440809 AAGCGATACTGATGT TTATTTAGCCGTAATAATTAC GGCGA GTGATTACTACAGCTAAATAA TATTTACAGATTACG ampG 442342 - 440867 - | muropeptide transporter TERM 508 441494 - 441466 - G 72 -11 -3.1012 | overlap 441454 441464 441463 AAATGCCGAAAATCA GCAGCGCCCG GAACAGCGA CAGGCGCTGC ATCAAAATCCCACCG TERM 509 442003 - 441990 - G 72 -4.5 -4.72986 | GAGGCCGAGCAAAAA GCGAT CACC ACCGC CAGTGCCGCCATCCA TERM 510 442181 - 442165 - G 71 -2.9 -4.76892 | overlap 442166 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGAGAGAAGAAACCA yajG 442964 - 442386 - | hypothetical protein bolA 443269 - 443586 + | transcriptional regulator BolA TERM 511 443640 - 443663 + F 93 -9.6 -4.59984 | opp_overlap 443633 443645, overlap 443645 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 512 443658 - 443645 - f 100 -9.5 -4.74132 | opp_overlap 443640 443645 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 513 443645 - 443658 + F 100 -9.5 -5.23292 | opp_overlap 443645, overlap 443640 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 514 443745 - 443730 - f 85 -6.8 -5.055 | overlap 443732 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 515 443743 - 443732 - f 71 -7.2 -4.15235 | overlap 443730 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG tig 443930 - 445228 + | trigger factor TERM 516 445263 - 445286 + F 100 -12.4 -5.9873 | opp_overlap 445263 445262 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA clpP 445474 - 446097 + | ATP-dependent Clp protease proteolytic subunit clpX 446223 - 447497 + | ATP-dependent protease ATP-binding subunit TERM 517 447526 - 447554 + F 80 -6.7 -4.88711 | opp_overlap 447531, overlap 447531 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 518 447549 - 447531 - f 93 -8.8 -4.88407 | opp_overlap 447526 447531 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 519 447531 - 447549 + F 91 -11 -4.3623 | opp_overlap 447531, overlap 447526 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 520 448631 - 448618 - g 77 -3.1 -5.10029 | gap 1, overlap 448608 448620 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 521 448636 - 448620 - g 82 -9.4 -4.17355 | overlap 448608 448618 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 522 448978 - 448967 - g 70 -4.4 -4.45485 | opp_overlap 448960 ATGAGATCGACAAAA TGTC TTCT GACA TGCGAGGCGATCCGG TERM 523 449680 - 449668 - g 75 -5.5 -4.72986 | GATTTTTACGAAAAA CGTGA CAT CCACG TCCACGTACCGGAAG lon 447685 - 450039 + | DNA-binding ATP-dependent protease La TERM 524 450104 - 450069 - f 79 -4.6 -5.14163 | opp_overlap 450072, overlap 450071 450072 ATGCACTAATAAAAA CAGGGCTGGCAGGC TAATTCGG GCTTGCCAGCCTTT TTTTGTCTCGCTAAG TERM 525 450102 - 450071 - f 74 -7.2 -4.19587 | opp_overlap 450072, overlap 450069 450072 GCACTAATAAAAACA GGGCTGGCAGGC TAATTCGG GCTTGCCAGCCT TTTTTTGTCTCGCTA TERM 526 450072 - 450101 + F 100 -13.6 -5.72616 | opp_overlap 450071 450069 450072 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT TERM 527 450101 - 450072 - f 73 -10.7 -3.10668 | opp_overlap 450072, overlap 450071 450069 CACTAATAAAAACAG GGCTGGCAGGC TAATTCGG GCTTGCCAGCC TTTTTTTGTCTCGCT hupB 450248 - 450520 + | transcriptional regulator HU subunit beta TERM 528 450556 - 450575 + F 100 -10 -5.7827 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT TERM 529 452501 - 452470 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ybaU 450712 - 452583 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 530 452626 - 452653 + F 72 -10.6 -2.93447 | opp_overlap 452627 452632, overlap 452632 GTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 531 452652 - 452627 - f 86 -11.9 -3.63515 | opp_overlap 452626 452632, overlap 452632 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 532 452647 - 452632 - f 78 -6 -4.89477 | opp_overlap 452632 452626, overlap 452627 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 533 452632 - 452647 + F 81 -8.2 -4.39571 | opp_overlap 452627 452632, overlap 452626 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA SSON_0425 452903 - 453205 + | IS600 ORF1 SSON_0426 453346 - 453957 + | IS600 ORF2 SSON_0427 454714 - 453917 - | IS21 ORF2 SSON_0428 455886 - 454714 - | IS21 ORF1 TERM 534 455044 - 455064 + g 77 -9.7 -3.59979 | overlap 455040 455048 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 535 455048 - 455060 + g 75 -6.9 -4.44046 | overlap 455040 455044 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_0429 455927 - 456193 + | IS600 ORF2 ybaV 456099 - 456506 + | hypothetical protein TERM 536 456512 - 456525 + F 70 -2.4 -5.0133 | opp_overlap 456512 AACCCTGTAATTAAT TTGC ATAGTG GCAA TTTTTTGCCAGACTG TERM 537 456565 - 456543 - f 74 -10.7 -3.12351 | opp_overlap 456538 456543 456545 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC TERM 538 456543 - 456565 + F 73 -10.7 -2.96274 | opp_overlap 456543, overlap 456538 456545 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC ybaW 456600 - 456998 + | hypothetical protein ybaX 457745 - 457050 - | queuosine biosynthesis protein QueC TERM 539 457785 - 457771 - R 88 -8.6 -4.89477 | GCTTGAACAATAAAA GCGTTA TGG TAACGC CTGCGATTAACCCGG ybaE 459510 - 457810 - | hypothetical protein TERM 540 458158 - 458176 + g 79 -2.2 -5.1925 | overlap 458159 458160 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 541 460033 - 460022 - g 95 -5.8 -5.44119 | overlap 460023 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 459598 - 460428 + | hypothetical protein TERM 542 460446 - 460461 + F 100 -11.8 -5.53288 | AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTGCGTTGAA TERM 543 460567 - 460553 - g 72 -4.3 -4.6008 | overlap 460565 AAAATAGAATTAAAA GAGAA AAAAA TTCTC CGTGGAAGGGCTATG TERM 544 460771 - 460758 - g 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG ybaO 460493 - 461038 + | putative LRP-like transcriptional regulator mdlA 461068 - 462840 + | putative multidrug transporter membrane\ATP-binding components mdlB 462833 - 464614 + | putative multidrug transporter membrane\ATP-binding components TERM 545 464651 - 464674 + F 89 -8.9 -4.67038 | opp_overlap 464646 464651 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAAAC glnK 464795 - 465133 + | nitrogen regulatory protein P-II 2 TERM 546 465305 - 465318 + G 70 -5.9 -4.15453 | overlap 465316 TGTTTATGACTATTC CGGGG ATTG CCCTG TTTTACGGTGGGTTG amtB 465163 - 466449 + | ammonium transporter TERM 547 466492 - 466466 - T 100 -9.5 -5.07053 | gap 1, opp_overlap 466466 466468, overlap 466468 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 548 466466 - 466492 + T 93 -7.3 -5.68023 | gap 1, opp_overlap 466466 466468, overlap 466468 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 549 466490 - 466468 - T 83 -9.9 -4.15748 | gap 1, opp_overlap 466466 466468, overlap 466466 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT TERM 550 466468 - 466490 + T 90 -9.9 -4.46828 | gap 1, opp_overlap 466468 466466, overlap 466466 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT tesB 467358 - 466498 - | acyl-CoA thioesterase II ybaY 467576 - 468148 + | glycoprotein-polysaccharide metabolism TERM 551 468155 - 468182 + T 90 -15 -2.71364 | opp_overlap 468153 468150 468149, overlap 468159 CAATATTAAGCGACG TTAACCCTCTCC GCCC GGAGAGGGTTAG TAGTTCCAGCGATAA TERM 552 468159 - 468178 + T 86 -13.6 -3.27298 | opp_overlap 468153 468150 468149, overlap 468155 ATTAAGCGACGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG ybaZ 468568 - 468179 - | hypothetical protein TERM 553 468572 - 468562 - G 72 -6.8 -4.16016 | GCATTGCGCAAGAAA CCAG CAT CTGG CACGCGATGGGTTGC ybaA 468869 - 469222 + | hypothetical protein TERM 554 469680 - 469698 + T 78 -5.2 -5.02074 | GATTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA ylaB 470818 - 469658 - | hypothetical protein ylaC 471485 - 470976 - | hypothetical protein TERM 555 471087 - 471073 - G 77 -11.4 -3.13403 | opp_overlap 471064, overlap 471071 TGTTCCTTATGAACA TCCGCG ACA CGCGGA GAGTTCAAGATGGCT ylaD 472113 - 471562 - | maltose O-acetyltransferase hha 472502 - 472284 - | hemolysin expression-modulating protein ybaJ 472902 - 472528 - | hypothetical protein TERM 556 473413 - 473428 + r 79 -11.8 -3.27476 | opp_overlap 473413 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT TERM 557 473428 - 473413 - R 100 -11.8 -5.28176 | opp_overlap 473413 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT acrB 476597 - 473448 - | acridine efflux pump TERM 558 474768 - 474789 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 559 476471 - 476510 + g 100 -15.8 -3.57144 | AGGCGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 477813 - 476620 - | acridine efflux pump TERM 560 477784 - 477802 + g 93 -6 -5.17744 | opp_overlap 477780 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 477955 - 478602 + | DNA-binding transcriptional repressor AcrR TERM 561 479025 - 479012 - g 70 -3.7 -4.62783 | overlap 478995 CAGCTACGGCAAAAA GTCGC TGAA GCGCC AGAAAAAATGCGCCA TERM 562 479546 - 479532 - g 79 -4.2 -5.15969 | CTTTAACTGAAAAAA CGGC GCAGGAA GCCG TCTCCCCGGATGAAG aefA 478730 - 482092 + | potassium efflux protein KefA ybaM 482465 - 482304 - | hypothetical protein priC 483006 - 482479 - | primosomal replication protein N'' ybaN 483076 - 483453 + | hypothetical protein apt 483606 - 484157 + | adenine phosphoribosyltransferase TERM 563 484209 - 484233 + F 70 -9.9 -3.09492 | opp_overlap 484158, overlap 484209 484211 484227 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 564 484468 - 484440 - g 72 -5.2 -4.56597 | gap 1, opp_overlap 484409 GTGGCGTCGGAAAAA CCTCTATCGCCCG ACTG CTGGCGA-AGGGG CTAAACTGCGAAACC TERM 565 485522 - 485502 - g 74 -10.4 -3.53224 | overlap 485503 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 566 485760 - 485744 - g 75 -4.3 -4.7497 | overlap 485747 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTGAAAAA TERM 567 485757 - 485747 - g 77 -6.8 -4.4831 | overlap 485744 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTGAA TERM 568 485812 - 485796 - g 93 -6.5 -5.27779 | TGGAACATGAAAAAA CGCCG GAACTGG CGGCG AAGCTAGCGGCAGAA TERM 569 485957 - 485915 - g 71 -9.1 -3.56594 | opp_overlap 485924 485930 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 570 486127 - 486110 - g 95 -6.9 -5.17744 | opp_overlap 486107 486110 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 484286 - 486211 + | DNA polymerase III subunits gamma and tau TERM 571 486213 - 486229 + F 77 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC TERM 572 486337 - 486325 - g 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA ybaB 486264 - 486593 + | hypothetical protein TERM 573 486673 - 486629 - g 72 -10.6 -3.07622 | gap 1, overlap 486619 486632 ACACAGCTTATGGAA GCACTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 574 486670 - 486632 - g 81 -13.1 -2.75382 | gap 1, overlap 486629 CAGCTTATGGAAGCA CTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 575 487013 - 487002 - g 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAATC recR 486593 - 487198 + | recombination protein RecR TERM 576 487198 - 487233 + F 72 -10.4 -2.90804 | opp_overlap 487189 487204, overlap 487197 487207 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG ATCA CCTGCTCTCGCTTGAA ATTATTCTCCCTTGT TERM 577 487227 - 487204 - f 100 -16.8 -3.90112 | opp_overlap 487198 487197 487207, overlap 487189 TCGTTTTTAAGCAAA CGAGAGCAGG ATCA CCTGCTCTCG CTTGAAATTATTCTC TERM 578 487207 - 487224 + F 73 -11.3 -2.55818 | opp_overlap 487204, overlap 487198 487197 TTTTTAAGCAAACGA GAGCAGG ATCA CCTGCTC TCGCTTGAAATTATT TERM 579 487769 - 487749 - g 100 -10.5 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAAC GGC GTCTTCTGG GAATCGGCTGGCGAA TERM 580 488434 - 488418 - g 81 -7.3 -4.60487 | overlap 488420 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 581 488432 - 488420 - g 72 -7.7 -3.91506 | overlap 488418 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 487308 - 489182 + | heat shock protein 90 TERM 582 489188 - 489215 + F 100 -15.7 -5.50723 | GGTTTCCTGATGTCA TGCCGGATGAC CTTTGT GTCATCCGGCA TTTTTCTTTTCATCA adk 489363 - 490007 + | adenylate kinase hemH 490139 - 491101 + | ferrochelatase ybaC 492057 - 491098 - | acetyl esterase TERM 583 491126 - 491150 + g 70 -5.7 -4.3129 | gap 1, opp_overlap 491123, overlap 491124 GTAAAGAACTGAGCG CCGTCG-CGA AGAGCC TCGTCGGCGG TTTTCATCATCCGTG TERM 584 493140 - 493119 - g 78 -7.9 -4.37198 | AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG CGCTATAGCGGAATT gsk 492209 - 493513 + | inosine-guanosine kinase TERM 585 493531 - 493562 + T 72 -8.6 -3.71873 | opp_overlap 493541 493542, overlap 493532 493541 493542 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTGGCTCTCGATGC TERM 586 493532 - 493561 + T 77 -12.1 -2.82803 | opp_overlap 493541 493542, overlap 493531 493541 493542 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTGGCTCTCGATG ybaL 495322 - 493646 - | putative cation:proton antiport protein TERM 587 495556 - 495524 - R 87 -10.6 -4.13945 | opp_overlap 495514, overlap 495527 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 588 495553 - 495527 - R 93 -15.3 -3.09831 | opp_overlap 495514, overlap 495524 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT SSON_0466 496410 - 495697 - | IS600 ORF2 SSON_0467 496853 - 496551 - | IS600 ORF1 fsr 498047 - 496905 - | fosmidomycin resistance protein TERM 589 497145 - 497133 - G 81 -10.5 -3.66424 | TAAAATCAGCGTAAA CGGCG CAA CGCCG AGGATAGAGCCCCAA TERM 590 497732 - 497713 - G 74 -7.8 -4.10007 | AGAACTGCGCCAAAA CTGCCCGC CAGC GCAAGCAG CACCAGACCACTTAA ushA 498265 - 499917 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 591 499948 - 499925 - T 95 -13.2 -3.67976 | opp_overlap 499918 499923 499921, overlap 499918 GGCAGTAATCCGAAA GTGCCGGATA TTTG CATCCGGCAC AATGCTTAATCGCGG ybaK 500433 - 499954 - | hypothetical protein TERM 592 500092 - 500103 + g 93 -5.8 -5.24129 | opp_overlap 500091 500092 GGGGGCGTCGATAAT CGTC GGCA GACG TTTTTTCTGCCCCAA TERM 593 500610 - 500631 + r 90 -7.3 -5.40072 | overlap 500611 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 594 500611 - 500630 + r 83 -10.8 -3.83561 | overlap 500610 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA ybaP 501431 - 500637 - | putative ligase TERM 595 501233 - 501252 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG ybaQ 501515 - 501910 + | hypothetical protein TERM 596 502109 - 502088 - T 75 -10.1 -3.59979 | opp_overlap 502075, overlap 502102 TGCGTCGATGCCAAA TGCGCCGCC CTAA AGCAGCGCA TCCGCAATGACGTAC ybaR 504629 - 502125 - | copper exporting ATPase TERM 597 503428 - 503387 - G 70 -10.9 -2.74012 | gap 1 GCACCATGCGAATGA TCCGTGACAGCGTGGTATGG CTG CCA-ACCGCACTGGCACGAA ACAGCACACTGCCGT ybaS 504891 - 505823 + | glutaminase ybaT 505826 - 507118 + | putative amino acid/amine transport protein TERM 598 507286 - 507268 - g 73 -3.8 -4.7497 | GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCCATTCGCTTCTA ybbI 507243 - 507650 + | DNA-binding transcriptional regulator CueR ybbJ 508106 - 507651 - | hypothetical protein ybbK 509023 - 508106 - | putative protease TERM 599 508904 - 508927 + g 72 -9.7 -3.33969 | GAGCCCCGGCTGTAA CGTTTTGGT ATAGCG ACCAAAACG TTCTACCGTCCATTG TERM 600 509808 - 509775 - gH 72 -10.3 -2.76833 | overlap 509774 509777 AAAGACGAAATTAAT CATGCGGATAAAGTG ATTA CACTGCAACCGCATG CCGGAGAAATGCAGG ybbL 509169 - 509846 + | putative ABC transporter ATP-binding protein YbbL TERM 601 510597 - 510571 - gT 73 -10.9 -2.59742 | overlap 510570 CGTAAGTTTTATAAT TCGCGCCACCA GTTGG TGGTGACGCAA TTGAAGAAGAAATGA ybbM 509806 - 510612 + | putative metal resistance protein TERM 602 510641 - 510610 - T 95 -10.9 -4.4846 | opp_overlap 510615 510618, overlap 510611 CAATTGAAGAAGAAA TGATGCGATGCCG GATGCG CAGCATCGCATCC GGCGTTGTGGTTCAT TERM 603 510640 - 510611 - T 90 -14.4 -3.27992 | opp_overlap 510615 510618, overlap 510610 AATTGAAGAAGAAAT GATGCGATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA TERM 604 510615 - 510648 + T 100 -16.8 -2.81547 | opp_overlap 510611 510610, overlap 510618 GAAGAAGAAATGATG CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA TERM 605 510618 - 510645 + T 95 -14.9 -3.55487 | opp_overlap 510611 510610, overlap 510615 GAAGAAATGATGCGA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC ybbN 511565 - 510675 - | putative thioredoxin-like protein ybbO 512399 - 511590 - | short chain dehydrogenase tesA 513015 - 512389 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 606 512685 - 512716 + gH 78 -12.4 -2.71011 | gap 1, opp_overlap 512715, overlap 512672 GGCGCAGCGTTTGCT CGGTTTGCTGTGGCT GAA AACCAC-GCAAACCG TCATTGCCGCCCAGT TERM 607 512949 - 512929 - GH 78 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCG GCGG-CACG GAAGGTTAACAGGGC TERM 608 513230 - 513259 + GH 75 -5.7 -4.72386 | gap 1, opp_overlap 513224 513223 ACGAAGAAGCGCGGG CAAAGTTG-CGCGC GAA GCACGTCGGCTTTG TTTTTCAGTCATTTA ybbA 512983 - 513669 + | putative ABC transporter ATP-binding protein YbbA TERM 609 514146 - 514156 + G 77 -8.2 -4.11484 | opp_overlap 514146 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAACCCCTTCCA ybbP 513666 - 516080 + | putative oxidoreductase ybbB 517408 - 516314 - | tRNA 2-selenouridine synthase TERM 610 516788 - 516801 + g 72 -4.5 -4.70879 | opp_overlap 516787 CCACAGGCGCAAATC CTGAC GGGC GTCGG TTTTTAGCATTTCGG TERM 611 518425 - 518440 + r 73 -4 -4.82819 | gap 1, opp_overlap 518425, overlap 518427 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG SSON_0488 519086 - 518583 - | IS1 ORF TERM 612 519403 - 519393 - H 73 -4 -4.75372 | ATCATGGACGAAAAA TGAA GCT TTCA ATCTCAGCGACGGTG TERM 613 520145 - 520128 - g 70 -4.1 -4.72272 | CCGCTTCACTAAAAA TCTGCGT CACC ACGTAGA AAATGCCGATCTACT TERM 614 520379 - 520365 - g 72 -7.1 -4.18494 | opp_overlap 520367 520367 CACGCTGATTGAAAA CACGC TACAG GCGTG CGTTGAATATCATGA folD 519544 - 520410 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase ybcJ 520412 - 520624 + | hypothetical protein TERM 615 520633 - 520654 + F 100 -15.9 -3.95836 | TGCCTGATCCCTTTC CCGGCCTGT ATCA ACAGGCCGG TTCTCTTTTCAGACT TERM 616 520875 - 520891 + G 78 -5.1 -4.77036 | opp_overlap 520871 GTCGTTTAAATTTGG CGTTGCT TAC GGCAATG TTTTTGGTCATCGCG ybcI 520837 - 521253 + | hypothetical protein TERM 617 521277 - 521254 - T 100 -16.8 -3.46602 | TGGCGCAGACGATAA CCGGATGCGA AAAC TCGCATCCGG CAATAGCGCAATTAC cysS 522674 - 521289 - | cysteinyl-tRNA synthetase TERM 618 523091 - 523081 - g 72 -5.4 -4.58283 | CAACGGTCTGAAAAA TACC CGT GGTA CGCTGGCAATGGCCC ppiB 522848 - 523342 + | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 619 523380 - 523415 + G 100 -12.7 -5.00616 | gap 1, opp_overlap 523390 AGATCTTCATCTCTG CGTGGAAGAACCGGCG ATCAC CGCCGGTT-TTCTGCG TTTTTTAGCGGGGGA TERM 620 523406 - 523390 - g 85 -11.5 -3.61398 | opp_overlap 523380 CTCTGCGTGGAAGAA CCGGCGA TCA CCGCCGG TTTTCTGCGTTTTTT TERM 621 523572 - 523586 + G 74 -6.4 -4.46212 | TCCCTGTTATTTCAT TCATGG CAA CCGTGA TTTTCTGCTCGGCAA ybbF 523345 - 524067 + | UDP-2,3-diacylglucosamine hydrolase purE 524185 - 524694 + | phosphoribosylaminoimidazole carboxylase purK 524691 - 525758 + | phosphoribosylaminoimidazole carboxylase ATPase subunit arcC 526788 - 525895 - | carbamate kinase TERM 622 526457 - 526441 - G 82 -7.9 -4.56597 | CTCTGGCTGCAAAAA CGCCGGA TCA TCAGGCG AAACCTCAATGCGCG ylbF 527438 - 526785 - | putative carboxylase TERM 623 527066 - 527022 - G 90 -7.1 -5.1615 | gap 1, overlap 527035 GGAATAGGCAAAAAA CTGGCGTAACTCAGCAGGCA GCGGAT CGCCTGCCGC-CAACGCCAG TGGCCCGAAAAGCCC ylbE 528450 - 527449 - | hypothetical protein TERM 624 527651 - 527639 - G 74 -7.7 -4.07885 | CACGCGCCCTGAAAA TCCCA GCC TGGGA TCTGCAACTGCATAT SSON_0500 529265 - 528762 - | IS1 ORF TERM 625 530355 - 530325 - R 91 -6.9 -5.63012 | gap 1, opp_overlap 530334 530335 AAAAATAAAGAAAAA CCACTGAAATCCTG ATAA CAGGCTTTC-GCGG CTGACTGCAAAATTG TERM 626 530417 - 530397 - R 77 -10.4 -3.36671 | ACCTTAACCGGAGAA TGCCCGCC GCAAG GACGGGCA TTGCAGGGGCCAGAT TERM 627 530650 - 530662 + r 72 -4.7 -4.72272 | CGGCATCTTTTCCTG GGGCG ATA CGGCC TTTTTGCTGCAGACC TERM 628 531533 - 531547 + r 83 -10 -4.11216 | CGGCATTTCGATCAT GGTGGT GAT ACCACC TTTTGCCGCTGCGCG gip 532380 - 531529 - | hydroxypyruvate isomerase SSON_0504 532819 - 533322 + | IS1 ORF TERM 629 534672 - 534662 - f 72 -8.2 -3.73072 | overlap 534663 AATGTTTTGATTAAA GCGC TTG GCGC AGGCGGTGTACGCAT sfmH 535187 - 536164 + | involved in fimbrial asembly sfmF 536175 - 536690 + | putative fimbrial protein SSON_0508 537623 - 538528 + | insertion element IS2 transposase InsD SSON_0509 539136 - 538633 - | IS1 ORF TERM 630 539683 - 539653 - R 76 -11.8 -2.60079 | overlap 539663 TGACCGTATAATTCA CGCGATTACACCGC ATT GCGGTATCAACGCG CCCTTAGCTCAGTTG envY 540563 - 539802 - | envelope protein TERM 631 540737 - 540707 - R 86 -11.2 -3.727 | opp_overlap 540719, overlap 540709 CTGACGAGAGCGAAA GAGGTAAGCCAGGT CGT ACCCGACTTACCTG GAGGAGATTTAATAC TERM 632 540735 - 540709 - R 90 -13.8 -3.44487 | opp_overlap 540719, overlap 540707 GACGAGAGCGAAAGA GGTAAGCCAGGT CGT ACCCGACTTACC TGGAGGAGATTTAAT ybcH 541636 - 540746 - | hypothetical protein nfrA 544609 - 541637 - | bacteriophage N4 receptor, outer membrane subunit TERM 633 544494 - 544479 - G 79 -4 -5.05116 | gap 1, opp_overlap 544492, overlap 544481 GGATAAATAACAAAA TG-GCGA TAA TCGCTCA GCCCCAGCTCTTCTG SSON_0516 545846 - 545343 - | IS1 ORF SSON_0517 549505 - 546074 - | rhs core protein with extension SSON_0518 550563 - 549478 - | hypothetical protein TERM 634 550449 - 550471 + gr 77 -3.2 -5.14563 | overlap 550451 GAATTTCATCGCCCA GCCTGGCGGC GGG GGGGCCAGAC TTTTTTGATGCCAAC SSON_0519 551098 - 550637 - | hypothetical protein SSON_0520 553027 - 551126 - | putative Vgr protein TERM 635 551446 - 551459 + g 90 -6.7 -5.12707 | overlap 551427 TACCTTCCTGGATCG TGACC GTCT GGTCA TTTTTTACGGTTTCG TERM 636 552655 - 552675 + g 70 -5.3 -4.37502 | overlap 552667 TCACCCCGTTTTCCT GCAACATCG TGC CGAGGATGC TTTTGATGTCCTCGT ybcZ 555212 - 553764 - | sensor kinase CusS ylcA 555885 - 555202 - | DNA-binding transcriptional activator CusR TERM 637 555416 - 555406 - G 82 -3.2 -5.24531 | overlap 555408 ATGGCGGAGAAAAAA CTCC AGC AGAG TAAACTCTTTACTGG TERM 638 555947 - 555968 + H 72 -6.7 -4.34402 | opp_overlap 555955, overlap 555946 ATGGCAATCGCTTAT TGGCAAAAT GACA ATTTTGTCA TTTTCCTGTCACCGG TERM 639 556935 - 556950 + G 81 -6.8 -4.65838 | overlap 556946 TAATGCTAATATTGG TGCTGC GCGT GCGGCA TTTTTCCCGTCTATC ylcB 556042 - 557424 + | copper/silver efflux system outer membrane protein CusC ylcC 557448 - 557780 + | periplasmic copper-binding protein ylcD 557796 - 559019 + | copper/silver efflux system membrane fusion protein CusB TERM 640 559056 - 559068 + G 87 -4.8 -5.19212 | overlap 559046 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTTTGGTGCTGAT TERM 641 560211 - 560250 + G 73 -11.5 -2.83715 | gap 1 ATATTATGTCGTTGG GCGGCATTG-CGATTGCC GTCGG GGCGATGGTCGATGCCGC TATCGTCATGATCGA TERM 642 561386 - 561354 - g 85 -12 -3.57144 | gap 1 TGCGTTATCCGCAAA GCTGGCGCGATAGCC CGCA GGC-ACTGCGCCAGC TACCGATCCTGACGC ybdE 559031 - 562174 + | putative inner membrane component for iron transport TERM 643 562507 - 562542 + G 84 -11.2 -3.71873 | gap 1, opp_overlap 562518 CAGCTTGGCGAGATG GTGGTCGAA-GAGCCGG TAT CCGGTTCATTTGCCCAC TTTGCCTATAAATAC pheP 562276 - 563652 + | phenylalanine transporter TERM 644 563684 - 563710 + T 100 -16.7 -5.65513 | opp_overlap 563682 563681 563679 CCGACAAAACGATGT CCGCTCTCATC CATTC GATGAGAGCGG TTTTTTTAATTACTG ybdG 564967 - 563720 - | putative transport TERM 645 565067 - 565046 - R 82 -11.5 -3.61103 | overlap 565048 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GAGAGAATTACACTT TERM 646 565065 - 565048 - R 90 -14.1 -3.38224 | overlap 565046 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGAGAGAATTACAC nfnB 565728 - 565075 - | dihydropteridine reductase ybdF 566190 - 565822 - | hypothetical protein ybdK 567687 - 566569 - | carboxylate-amine ligase TERM 647 567259 - 567246 - G 82 -8.1 -4.49556 | CGTGCAGCAAATAAA TGGCG TCAT CGCCA CTGGCGCAGCCAACA TERM 648 568280 - 568311 + r 71 -10.8 -2.59564 | opp_overlap 568279, overlap 568280 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GTAA TCCCCGCATATCCG GTTGTCAGGTCAGGA TERM 649 568280 - 568312 + r 77 -10.6 -3.32963 | gap 1, opp_overlap 568279, overlap 568280 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGGAT TERM 650 568351 - 568380 + r 100 -17.9 -4.19735 | ACCTGCTTTACACTT TCGCCCGCGGTCA GTGA TGGCTGCGGGCGA TTTCGTTTTACGAGC TERM 651 568567 - 568536 - R 70 -8.9 -3.45571 | gap 2, opp_overlap 568563, overlap 568530 GTCTGGAAAGATGAA GCCCCAGGA--GATA TTTC TATCAATCCTGGGGC TGCCACTCCGAACCT entD 569533 - 568904 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 652 569668 - 569639 - R 93 -14.3 -3.30124 | TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACGAC GCGCACTTTGTCAAC fepA 571939 - 569699 - | outer membrane receptor FepA TERM 653 570062 - 570093 + g 77 -2.9 -5.11836 | gap 1, overlap 570065 TGAGTTCAACGTGTA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 654 570727 - 570699 - G 70 -10.2 -3.18849 | gap 1, opp_overlap 570716, overlap 570665 570697 CTCACACCATCAATA GCGCCG-CCGGTG TTCG CCCCGGTCAGCGC CTGGGTATTGGAACT TERM 655 571264 - 571281 + g 75 -6.9 -4.4017 | GGCCCTGGTTGATAT CCCACGC GTCA GCCTGGG TTTTGTCGAGGTTGC TERM 656 571406 - 571429 + g 82 -3.1 -5.19212 | gap 1, overlap 571406 571409 GAAATAAGCGTCCCA GG-AGCCGTG CCACT CACCGCTGCC TTTTTTGGTAATGAT TERM 657 572447 - 572457 + G 72 -6.8 -4.15044 | ATGCCAACTGGCGCG GCAG CTA CTGC TTTATTCCCACCGAA TERM 658 572554 - 572536 - g 77 -8.2 -4.08692 | GAAGGCTGGCGAAAA CTATTACC CCA GGCAATAG CCGATCCGCTGAATC fes 572260 - 573384 + | enterobactin/ferric enterobactin esterase ybdZ 573387 - 573605 + | putative cytoplasmic protein TERM 659 575020 - 575004 - g 95 -10.1 -4.64144 | overlap 574995 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGCAGATGCGCGT TERM 660 575679 - 575698 + G 76 -7.8 -4.2123 | opp_overlap 575667 CGACCACGCACTTTG TGCCGTCG ATGC TGGCGGCA TTTGTTGCCTCGCTG TERM 661 575868 - 575880 + G 70 -6.9 -4.07687 | CGGCGGTAGATGTCA GCTGG TAT CCGGC TTTTGGCGAGGAACT TERM 662 576818 - 576828 + G 78 -8.2 -4.18762 | CTGTTTTGTTTCCAT CCGG CGT CCGG TTTTGCCTGGCAGTT entF 573602 - 577483 + | enterobactin synthase subunit F TERM 663 577528 - 577502 - f 77 -8.9 -3.94811 | opp_overlap 577502 AATATTATCTATAAA CCCATAATTAC AGAAA ATAATTATGGG TTTTTTATTTGTTTG TERM 664 577502 - 577528 + F 100 -8.2 -5.85425 | opp_overlap 577502 AATATTATCTATAAA CCCATAATTA CAGAAAA TAATTATGGG TTTTTTATTTGTTTG fepE 577699 - 578832 + | ferric enterobactin transport protein FepE fepC 579644 - 578829 - | iron-enterobactin transporter ATP-binding protein fepG 580633 - 579641 - | iron-enterobactin transporter permease TERM 665 580425 - 580399 - G 95 -10 -4.67353 | overlap 580400 TCAGCGACTGAAAAA TCGCGCCGCTGA CGC CCAGCGCCGCGC CAATCAACAGCGCCA TERM 666 580424 - 580400 - G 89 -13.5 -3.3993 | overlap 580399 CAGCGACTGAAAAAT CGCGCCGCTGA CGC CCAGCGCCGCG CCAATCAACAGCGCC fepD 581634 - 580630 - | iron-enterobactin transporter membrane protein ybdA 581745 - 582995 + | enterobactin exporter EntS TERM 667 583023 - 583047 + T 74 -11.3 -2.85407 | overlap 583022 TTTCCCCTCACCCTA ACCCTCTCCCC AAA GGGGCGAGGGG ATTATTAGTGCTCTA fepB 584041 - 583076 - | iron-enterobactin transporter periplasmic binding protein entC 584416 - 585591 + | isochorismate hydroxymutase 2 TERM 668 586280 - 586336 + G 77 -10.2 -3.6761 | gap 2, opp_overlap 586267 586271, overlap 586281 586325 AACAGACACGCTACC TGTGC-GCGATCCCGGCGG-CTCATAAC TAC GCTATGAGTTCGCCAGGATCGCTGGGCG TCTTTCTTGCCGGAG TERM 669 586281 - 586335 + G 73 -11.5 -2.80244 | gap 2, opp_overlap 586271, overlap 586280 586325 ACAGACACGCTACCT GTGC-GCGATCCCGGCGG-CTCATAAC TAC GCTATGAGTTCGCCAGGATCGCTGGGC GTCTTTCTTGCCGGA TERM 670 586811 - 586826 + G 71 -3.2 -4.87626 | AGCACAATGCCAGTG CCTTTG ATGC CAACGG TTTTTACTGTTCCGG TERM 671 587196 - 587176 - g 70 -3.9 -4.72201 | overlap 587179 GTCGATAAAAAACAA TTACGTCAG TGG CTGGCGTCA CGCGCATCAGCCTGA entE 585601 - 587211 + | enterobactin synthase subunit E entB 587225 - 588082 + | 2,3-dihydro-2,3-dihydroxybenzoate synthetase TERM 672 588138 - 588153 + G 70 -6.1 -4.15044 | TAAAGGTATCGGCTA CGCCA CGGCGC TGGCG TTTGTTGAAGCGGGA entA 588082 - 588828 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 588831 - 589244 + | hypothetical protein TERM 673 590897 - 590909 + G 72 -6.9 -4.19177 | overlap 590896 GGTAGATGCGGGTAC GCGTG CTG CGCGC TTTATGTTGCAGGAT cstA 589425 - 591530 + | carbon starvation protein TERM 674 591648 - 591680 + F 73 -9.8 -3.34715 | gap 1, opp_overlap 591658, overlap 591646 591648 TTGATAGCATTTGTA G-GCCGGATAAGGCG TTCA CGCCGCATCCGGCAC TCTTTCAGCAACATG ybdD 591712 - 591909 + | hypothetical protein ybdH 593007 - 591919 - | hypothetical protein TERM 675 594243 - 594271 + G 77 -8.2 -4.14764 | gap 1 GAAGGAATCGACGTT GCTGGCAGCAG CTGAACGC CTGC-GCCAGC TTTAGTTATTTAACC ybdL 593116 - 594276 + | putative aminotransferase ybdM 594906 - 594277 - | hypothetical protein SSON_0555 596395 - 596898 + | IS1 ORF dsbG 597650 - 596892 - | disulfide isomerase/thiol-disulfide oxidase TERM 676 598097 - 598075 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 598022 - 598585 + | alkyl hydroperoxide reductase subunit C TERM 677 598649 - 598668 + F 100 -13.6 -4.63218 | AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 678 598681 - 598734 + F 72 -8.9 -3.53012 | gap 1, opp_overlap 598694, overlap 598684 CGATTTTCTTCCCCG CACCATGATGCAAGCTGCATCCA-GG TAG CCGTAGAGGCCGCTTGCATGATGATG TTTAAAGCCCAGGAG TERM 679 598800 - 598783 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 598726 - 600321 + | alkyl hydroperoxide reductase, F52a subunit TERM 680 600352 - 600375 + T 100 -13.1 -5.27923 | opp_overlap 600367, overlap 600366 ACCTGCAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATGGCATTA TERM 681 600421 - 600395 - T 100 -18 -4.7373 | opp_overlap 600366 600388 600387, overlap 600367 TTATGGCATTAAAAA GCCCTGCCGGGA TGT TCCAGGCAGGGC GGCATAAATACTTTT ybdQ 600870 - 600442 - | hypothetical protein ybdR 601091 - 602329 + | putative oxidoreductase TERM 682 602525 - 602506 - gT 88 -12.2 -3.53811 | CTGATTTTGCGTAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 602970 - 602560 - | nucleoside diphosphate kinase regulator SSON_0561 602410 - 602871 + | hypothetical protein TERM 683 603050 - 603028 - TR 100 -12.7 -5.11836 | opp_overlap 603028 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 684 603028 - 603050 + Tr 86 -11.2 -3.6608 | opp_overlap 603028 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT rna 604006 - 603200 - | ribonuclease I TERM 685 603984 - 603970 - G 77 -8.5 -4.13872 | overlap 603961 603980 603981 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGCCAGAATG TERM 686 604054 - 604095 + r 73 -7.9 -4.19371 | opp_overlap 604061, overlap 604057 CTATCTATTAAATCA TAAAAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 687 604057 - 604092 + r 70 -9.6 -3.10512 | opp_overlap 604061, overlap 604054 TCTATTAAATCATAA AAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGA TGATTTATTCAGCGT TERM 688 604088 - 604061 - R 100 -18.5 -5.42265 | opp_overlap 604057 604054 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA ybdS 605583 - 604120 - | hypothetical protein TERM 689 605101 - 605085 - G 77 -6.5 -4.64598 | opp_overlap 605091, overlap 605056 605086 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 690 605100 - 605086 - G 72 -10 -3.38036 | opp_overlap 605091, overlap 605056 605085 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG citG 606512 - 605634 - | triphosphoribosyl-dephospho-CoA synthase TERM 691 605745 - 605762 + gr 78 -6.2 -4.63928 | ATAATCGAGATCGGC GGGGGT TCGAAT GCCCCC TTTTTGCAATAATGT citX 607038 - 606487 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase TERM 692 606572 - 606587 + gr 83 -10.4 -3.72576 | TGGGTTTTTCCACGC GCGCAG ACGG CTGCGC TTTGCTCGCACAACA citF 608574 - 607042 - | citrate lyase alpha chain citE 609508 - 608585 - | citrate lyase beta chain; acyl lyase subunit citD 609786 - 609490 - | citrate lyase subunit gamma TERM 693 610109 - 610089 - R 71 -7.5 -3.93695 | TTCAGTACCGACAAA GCGGTGAGT TAC ACCCAGCGC GGGAGCGAGGTACTG TERM 694 610545 - 610534 - R 80 -7.2 -4.58395 | opp_overlap 610541, overlap 610536 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT SSON_0570 611220 - 610717 - | IS1 ORF TERM 695 611569 - 611583 + H 95 -2.7 -6.14618 | overlap 611570 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 696 611570 - 611582 + H 72 -6.2 -4.25111 | overlap 611569 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 697 611663 - 611710 + H 81 -5.1 -5.13343 | gap 1, overlap 611664 CCTGAAGGTGCATGT TGTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAGTTGATAACC TTTTATTTTCACTTG TERM 698 611664 - 611709 + H 72 -8.6 -3.66379 | gap 1, overlap 611663 CTGAAGGTGCATGTT GTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAGTTGATAAC CTTTTATTTTCACTT TERM 699 613197 - 613209 + GH 71 -3.3 -4.7373 | TTTGCCGATCGCCAG GTGGC GGG GCTGC TTTTTGGTAAAGTGC citA 612015 - 613673 + | putative sensor-type protein citB 613642 - 614322 + | two-component response regulator DpiA TERM 700 614325 - 614361 + T 74 -8.7 -3.94746 | opp_overlap 614332 614344, overlap 614327 614328 614331 614332 CCACAGTGGGTGACA TGATAAAGCCGGAGGAA ACT TGCCTCCGGCATTACTA TTTACTTGCCTGTGA TERM 701 614327 - 614359 + T 72 -9.1 -3.56006 | opp_overlap 614332 614344, overlap 614325 614328 614331 614332 ACAGTGGGTGACATG ATAAAGCCGGAGGAA ACT TGCCTCCGGCATTAC TATTTACTTGCCTGT TERM 702 614328 - 614358 + T 78 -12.6 -2.72881 | opp_overlap 614332 614344, overlap 614327 614325 614331 614332 CAGTGGGTGACATGA TAAAGCCGGAGGAA ACT TGCCTCCGGCATTA CTATTTACTTGCCTG TERM 703 614331 - 614355 + T 75 -9.9 -3.50456 | opp_overlap 614332 614344, overlap 614328 614327 614325 614332 TGGGTGACATGATAA AGCCGGAGGAA ACT TGCCTCCGGCA TTACTATTTACTTGC TERM 704 614332 - 614354 + T 81 -13.4 -2.6955 | opp_overlap 614332 614344, overlap 614331 614328 614327 614325 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG TERM 705 614354 - 614332 - T 95 -13.4 -4.0162 | opp_overlap 614331 614328 614327 614325 614332, overlap 614344 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG dcuC 615706 - 614363 - | C4-dicarboxylate transporter DcuC SSON_0575 615974 - 616477 + | IS1 ORF TERM 706 616626 - 616603 - g 100 -4.5 -5.73978 | overlap 616604 616619 ACGACAAAGAAAAAA CCGATCGCT ATAACG AGCGACCGT GGGGTGGCGGTTTTG TERM 707 616625 - 616604 - g 74 -8 -4.01946 | overlap 616603 616619 CGACAAAGAAAAAAC CGATCGCT ATAACG AGCGACCG TGGGGTGGCGGTTTT crcA 616479 - 616961 + | palmitoyl transferase for Lipid A TERM 708 617094 - 617110 + F 71 -7.3 -4.02302 | opp_overlap 617096 GGTGTACTGGTAACC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 617136 - 617345 + | cold shock protein CspE TERM 709 617385 - 617369 - T 83 -9.4 -4.36729 | opp_overlap 617369 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTCTTT TERM 710 617369 - 617385 + T 100 -9.4 -5.9663 | opp_overlap 617369 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTCTTT crcB 617782 - 617399 - | hypothetical protein TERM 711 618516 - 618498 - g 77 -3 -5.06414 | opp_overlap 618500 618512, overlap 618500 GTGCGGGAACAAAAA TATCGGGC AAA GCCGGATT ATAGATCCCTTTGGC ybeM 618100 - 618663 + | putative amidase tatE 618792 - 618995 + | twin arginine translocase protein E TERM 712 619059 - 619088 + T 89 -9.3 -4.59109 | opp_overlap 619060, overlap 619061 CGCTTCAAAAAGCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 713 619087 - 619060 - T 85 -12.8 -3.45031 | opp_overlap 619059 619061 GCTTCAAAAAGCTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 714 619061 - 619086 + T 100 -16.3 -3.90762 | opp_overlap 619060, overlap 619059 CTTCAAAAAGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_0581 620416 - 619070 - | IS4 orf TERM 715 620406 - 620431 + g 73 -9.1 -3.61398 | opp_overlap 620406 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 716 620431 - 620406 - G 100 -9.8 -5.61596 | opp_overlap 620406 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC lipA 621498 - 620533 - | lipoyl synthase TERM 717 621388 - 621421 + g 74 -6 -4.57073 | gap 1, overlap 621390 TTTCATCCATTCCGG CTTGCGCAGCAGGGC TTCGC GCTCTGTTGC-CACG TTTTTAACCGGGATA ybeF 622507 - 621707 - | putative DNA-binding transcriptional regulator lipB 623561 - 622920 - | lipoyltransferase ybeD 623925 - 623662 - | hypothetical protein TERM 718 623981 - 623954 - R 75 -9.8 -3.56675 | opp_overlap 623958, overlap 623952 623958 TAACGTAATTAAATA GCAACTCCCGCC AGAA GGCGGGAGTTTT TTACTGATGCTTAGT TERM 719 623958 - 623977 + r 100 -15 -5.19212 | opp_overlap 623954 623952 623958 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT TERM 720 623977 - 623958 - R 100 -15 -3.50456 | opp_overlap 623958, overlap 623954 623952 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT dacA 625246 - 624035 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 721 624929 - 624914 - G 77 -10.4 -3.64049 | CGAAGAACCTTTAAA CACCGG GTTA CCGGTG GCCCATGCGTCGTTG rlpA 626473 - 625385 - | rare lipoprotein A mrdB 627596 - 626484 - | cell wall shape-determining protein TERM 722 627537 - 627571 + g 100 -6.5 -5.80364 | CAGTAAGATCAGCAG CATTGTGGGATCGAG ATGGA CTTTATCCCAGAATG TTTTTTTATTCGGAT mrdA 629500 - 627599 - | penicillin-binding protein 2 TERM 723 628164 - 628177 + g 74 -2.3 -5.03747 | opp_overlap 628175, overlap 628155 628175 ACCGGAATGGTGTCA CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 724 629441 - 629429 - G 77 -6.2 -4.66264 | overlap 629430 CAAAATCCCCAAAAA GGCG ACCAG CGCC CGGCGCACAAACAGC ybeA 629998 - 629531 - | SPOUT methyltransferase superfamily protein ybeB 630211 - 630002 - | hypothetical protein phpB 631190 - 630666 - | PhpB nadD 631855 - 631214 - | nicotinic acid mononucleotide adenylyltransferase TERM 725 631557 - 631547 - G 70 -4.6 -4.48713 | overlap 631549 CTGACCAATAATAAA CGCC AGC GGCA CGTCCGGTCCTTGTT holA 632888 - 631857 - | DNA polymerase III subunit delta TERM 726 632867 - 632825 - G 100 -12 -4.45544 | gap 1, opp_overlap 632829, overlap 632827 632829 CGTTACCAAGTAAAA GATACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGT-TG TTCCGGGTACAACCG TERM 727 632866 - 632827 - G 100 -17.1 -3.83437 | opp_overlap 632829, overlap 632825 632829 TTACCAAGTAAAAGA TACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGTT GTTCCGGGTACAACC TERM 728 632864 - 632829 - G 100 -19.7 -3.49321 | opp_overlap 632829, overlap 632827 632825 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA TERM 729 632829 - 632864 + g 100 -17.5 -3.63515 | opp_overlap 632829 632827 632825 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA rlpB 633469 - 632888 - | LPS-assembly lipoprotein RplB TERM 730 633238 - 633270 + g 70 -4.7 -4.55295 | opp_overlap 633243 CGATGCTCACTTTAC CCAAACGCAGGGATG GAA CGTCCTTACGCGTGG TTTCTTTATCAAGCA TERM 731 633404 - 633385 - G 72 -10 -3.36785 | overlap 633386 TCATAGTGGAAGGAA CCTGCGTG GTAT CACGCAGA TGCCAGCCACACCCG TERM 732 633403 - 633386 - G 73 -11.3 -2.6175 | overlap 633385 CATAGTGGAAGGAAC CTGCGTG GTAT CACGCAG ATGCCAGCCACACCC leuS 636066 - 633484 - | leucyl-tRNA synthetase TERM 733 635721 - 635737 + g 78 -5.1 -4.8048 | opp_overlap 635719 AGTCATAACCAAAGC CCAGC ATTTTGA GCTGG TTTTTCATATACGCG TERM 734 635826 - 635851 + g 74 -6.2 -4.57073 | gap 2, opp_overlap 635825 CAGGCAGACCAAACG CGTCC--CAGCC GATC GGCTGCAGGACG TTTTTGCCCAGCATA ybeL 636301 - 636783 + | hypothetical protein ybeQ 637836 - 636853 - | hypothetical protein TERM 735 636936 - 636954 + g 76 -11 -3.30039 | opp_overlap 636925, overlap 636933 GATACAGGTCGAGAG CCTGTCGG AGA TCGACAGG TCTTCCTTCTCCGTA TERM 736 637451 - 637476 + g 76 -7.5 -4.1523 | opp_overlap 637441, overlap 637441 GACATTCCGCTCTCC GCGGCTATCTG ATAC CAGACAACCGC TTCTTTATAATTGGG TERM 737 637751 - 637735 - G 73 -3.7 -4.81212 | GCGATTATAATAAAA CCCAACA ATA TATTGAG CCTCGCAATCGCCTT ybeR 637994 - 638701 + | hypothetical protein ybeS 638698 - 640125 + | putative enzyme of polynucleotide modification TERM 738 640150 - 640171 + T 72 -2.9 -4.9934 | overlap 640152 TTAATGTGCGGGAAG TCCGGCAAG TAAT CTTTCCGCA TTTTTGTAATGTTGT ybeT 640689 - 640135 - | hypothetical protein TERM 739 641348 - 641330 - g 77 -10.2 -3.66784 | TCAGTGCGAAGACAA CGCTTCGC TAC GCGAGGCG CTAACCCTGTACAAA ybeU 640791 - 641498 + | putative tRNA ligase ybeV 641495 - 642946 + | hypothetical protein TERM 740 642961 - 643004 + T 100 -15.2 -3.56643 | overlap 642964 AGGATGTGTTTTTTG CGCCGATGCCGGATGCAGCG TTTA TGCCGCATCCGGCAGCCGTG TTTAAGGGATCTCAA ybeW 644676 - 643006 - | putative dnaK protein TERM 741 644756 - 644719 - R 76 -9.3 -3.74227 | gap 1, overlap 644717 ATAAACAGATAAACA GATTAAGACCACC-CAGG TAA CGCGTGGTGATCTTAATC AATGACGTGTGTTAA rihA 645703 - 644768 - | ribonucleoside hydrolase 1 gltL 646546 - 645821 - | ATP-binding protein of glutamate/aspartate transport system gltK 647220 - 646546 - | glutamate/aspartate transport system permease gltJ 647960 - 647220 - | glutamate/aspartate transport system permease TERM 742 647651 - 647634 - G 71 -2 -5.01811 | GGATGAAAGGAAAAA CTGAAT ATTGGG ATCCAG CTCGGCCTTAAACCA TERM 743 648007 - 647980 - R 100 -16.4 -5.26316 | CTACTCCAGAAAAAA GAGGGTAGCAGC GTTA ACTGCTACCCTC GAAGATTGTTACCCA ybeJ 649038 - 648130 - | glutamate and aspartate transporter subunit TERM 744 648373 - 648384 + g 70 -5.8 -4.29326 | overlap 648364 CTTGCCGACGATTTC CCAG TTGT CTGG TTTCTTCGCTTTCGC TERM 745 648588 - 648616 + g 81 -7.3 -4.72272 | CGGCTTTGTCTTTCA GGTCGGCAAAATC TTT GATATCGCCGCCC TTTTTGGTCAGCAGG TERM 746 649637 - 649653 + G 83 -12.3 -3.37915 | overlap 649635 GCACTTATCCATCTC GGCGCAA ACG TTGCGCC TCTTACTTTGTCGGG SSON_0610 649493 - 651370 + | hypothetical protein TERM 747 651397 - 651377 - T 100 -13.3 -5.10208 | GAACCGTAAGAAAAA GGGGCATGA TAA CCATGCCCC AAAGCTCAATGAGAA lnt 652986 - 651448 - | apolipoprotein N-acyltransferase TERM 748 652323 - 652350 + g 72 -10.6 -3.12351 | opp_overlap 652317 652318 CCATCGAAACCTGAA TGGTTTTCTCCG GTTG CGGGGTAAACCA TTGGATGTAACGCAG TERM 749 652962 - 652936 - G 81 -10.2 -3.97307 | gap 1, opp_overlap 652936 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC TERM 750 652936 - 652962 + g 70 -10.2 -3.20723 | gap 1, opp_overlap 652936 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC ybeX 653889 - 653011 - | putative transport protein ybeY 654446 - 653979 - | putative metalloprotease TERM 751 654387 - 654402 + g 73 -9 -3.67611 | TTGAAACTGGCTCTC TTCCGG TAAC CCGGAA TTATCTTCACATGCC ybeZ 655522 - 654443 - | putative ATP-binding protein in pho regulon TERM 752 654477 - 654490 + g 73 -3.7 -4.86293 | overlap 654463 654463 TCGCGCTTGCGTTCT GCCGC CAGC GCCGC TTTTCGTTTTTGTTC TERM 753 655122 - 655141 + g 82 -9.2 -4.26292 | overlap 655103 GCCTGGTTTGGCGTG CGCGGCTT AATT ACGCCGCG TTTGGTTTTGATATT TERM 754 655631 - 655606 - R 100 -13.3 -5.51046 | gap 1, overlap 655609 TAAAGAGAGAAAAAA CAAGGCCCACCG GAA CGGCGGGCCT-G AGAATTACGGCTGAT TERM 755 655629 - 655609 - R 100 -16.1 -4.78477 | overlap 655606 AGAGAGAAAAAACAA GGCCCACCG GAA CGGCGGGCC TGAGAATTACGGCTG yleA 657060 - 655636 - | hypothetical protein TERM 756 656711 - 656688 - G 72 -10.2 -3.39505 | gap 1, opp_overlap 656687 656700 AGCTGATATCTACAA CCGGGCTGCGG TCG CCGC-GCACGG AGTTGATCATCTCCG TERM 757 657571 - 657538 - g 83 -10.3 -4.10657 | gap 1, overlap 657541 CTATATGGTGGAAAA CACCGTCCTGCAACAG GCG CTGTGGCAGG-CGCTG GAAGCGCATCCGAAA TERM 758 657568 - 657541 - g 70 -10.6 -2.78508 | gap 1, overlap 657538 TATGGTGGAAAACAC CGTCCTGCAACAG GCG CTGTGGCAGG-CG CTGGAAGCGCATCCG ubiF 657206 - 658381 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 759 658530 - 658503 - T 77 -11.4 -3.28209 | opp_overlap 658509, overlap 658509 ATGAACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTT AATGTGGCTGGGGTA TERM 760 658509 - 658524 + T 100 -10.4 -5.22312 | opp_overlap 658503 658509 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 761 658524 - 658509 - T 100 -10.4 -5.1417 | opp_overlap 658509, overlap 658503 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 762 658718 - 658729 + T 73 -4.4 -4.81249 | CCGCTTGGCGATACC CCAA CAAA TTGG TTTTTGAATTTGCCG TERM 763 659575 - 659612 + T 95 -12 -4.36596 | opp_overlap 659576 659577 659582, overlap 659576 659577 659582 ACAAGCACCTCAATA ACTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCGCA TTTCTTACTTATACG TERM 764 659576 - 659611 + T 100 -15.5 -3.21235 | opp_overlap 659576 659577 659582, overlap 659575 659577 659582 CAAGCACCTCAATAA CTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCGC ATTTCTTACTTATAC TERM 765 659610 - 659576 - T 100 -16.6 -3.66732 | gap 1, opp_overlap 659576 659575 659577 659582, overlap 659577 659582 CAAGCACCTCAATAA CTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTC-G CATTTCTTACTTATA TERM 766 659577 - 659610 + T 100 -19 -2.52018 | opp_overlap 659576 659577 659582, overlap 659576 659575 659582 AAGCACCTCAATAAC TGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCG CATTTCTTACTTATA TERM 767 659610 - 659577 - T 100 -16.8 -2.79557 | opp_overlap 659577 659576 659575 659582, overlap 659576 659582 AAGCACCTCAATAAC TGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTCG CATTTCTTACTTATA TERM 768 659605 - 659582 - T 100 -15.3 -3.85389 | opp_overlap 659577 659576 659575 659582, overlap 659576 659577 CCTCAATAACTGAAA CAGCCCCGG ATTTCA CCGGGGCTG TTTCGCATTTCTTAC TERM 769 659582 - 659605 + T 100 -15.3 -3.76534 | opp_overlap 659582 659576 659577, overlap 659577 659576 659575 CCTCAATAACTGAAA CAGCCCCGG ATTTCA CCGGGGCTG TTTCGCATTTCTTAC asnB 661281 - 659617 - | asparagine synthetase B TERM 770 659740 - 659716 - G 80 -11.3 -3.40611 | overlap 659714 TTTAGCGGAAGAACA CGCGACGGACG GGC CGCCCGGCACG CACTCAGCGGCGCTC TERM 771 659981 - 659991 + g 71 -3.2 -4.87318 | overlap 659975 GACTCAAAACATTCA CGCA GGA TGTG TTTTTCCATTTTGCC TERM 772 661352 - 661338 - H 95 -7.8 -5.40072 | overlap 661347 661350 GCTTGTTTAAAAAAA TGCCGC AAA GCAGCA CTGTGCGCAAGCGAT SSON_0628 661750 - 662253 + | IS1 ORF TERM 773 662426 - 662451 + T 82 -13.3 -3.06162 | opp_overlap 662430 CGTTTGTCATCAGAG CCAACCACGTC CGCA GACGTGGGTGG TATTCAGATAACGTC TERM 774 662447 - 662430 - T 77 -11.3 -3.14468 | opp_overlap 662426 TGTCATCAGAGCCAA CCACGTC CGCA GACGTGG GTGGTATTCAGATAA nagD 663207 - 662455 - | UMP phosphatase nagC 664475 - 663255 - | transcriptional repressor of nag (N-acetylglucosamine) operon nagA 665632 - 664484 - | N-acetylglucosamine-6-phosphate deacetylase TERM 775 664787 - 664777 - G 70 -4 -4.59773 | TTTTACCCGCAAAAA TGAA CTG TTCA ATGTTGGCACCTGCT TERM 776 664837 - 664849 + g 73 -9.1 -3.66356 | CCAGACACAGTTTGT CGCCT TTA AGGCG TTTAGCGTTACGAAT nagB 666492 - 665692 - | glucosamine-6-phosphate deaminase TERM 777 666106 - 666119 + g 100 -6.7 -5.52023 | AAACAGATGAATTTT TCCGT AAGA ACGGA TTTTTTCTTCATACT TERM 778 666880 - 666902 + G 85 -13.4 -3.1886 | overlap 666892 TACAGCTCCCTATCG CGGTGCTGCC GGT GGCGGCACTG TTGCTGCGATTCGGT TERM 779 667223 - 667238 + G 79 -4.6 -4.88736 | overlap 667205 667204 CGGCAAACGCTTTGT GCCGAT TGCC ACCGGC TTTTTCTGCCTGGTG nagE 666825 - 668771 + | N-acetyl glucosamine specific PTS system components IIABC TERM 780 668878 - 668900 + F 100 -12 -6.15828 | opp_overlap 668878 GCGGGACTGGCAAAA GCGGTGGAGA TCT TCTCTGCCGC TTTTTTTTTCATCAA TERM 781 668900 - 668878 - f 73 -7.6 -4.11216 | opp_overlap 668878 GCGGGACTGGCAAAA GCGGTGGAGA TCT TCTCTGCCGC TTTTTTTTTCATCAA TERM 782 668928 - 668938 + F 72 -5.4 -4.43272 | opp_overlap 668928 CAATCATCCCCATAA TCTC AGT GAGA TTTTCGATTTTCGCT glnS 669030 - 670694 + | glutaminyl-tRNA synthetase TERM 783 670896 - 670912 + F 100 -10.8 -5.4588 | opp_overlap 670896 GCAAACAATCCAAAA CGCCGC GTTCA GCGGCG TTTTTTCTGCTTTTC TERM 784 670912 - 670896 - f 93 -10.8 -4.39407 | opp_overlap 670896 GCAAACAATCCAAAA CGCCGC GTTCA GCGGCG TTTTTTCTGCTTTTC TERM 785 672123 - 672103 - g 74 -8.3 -3.86897 | GGTACGCGCGATAAA GTTGACGAT CGC AGCGTCAAC GACCTTTATGACGGC TERM 786 672385 - 672372 - g 81 -6.7 -4.63527 | GTATGACCTGAAAAA CTGGA ATCT TCCAG GCTTCGCCATCGGCG ybfM 671272 - 672441 + | hypothetical protein ybfN 672728 - 673054 + | hypothetical protein TERM 787 673055 - 673074 + T 80 -5.7 -5.011 | opp_overlap 673055 673052 673057 AGTAATAACAAATAA GTGAGAG CTGTAA CTCTCGC TTTTCTTATTTCCCT TERM 788 673095 - 673124 + T 78 -12.3 -2.72463 | opp_overlap 673101, overlap 673101 TTATTTCCCTTGCAT AAAAAAGCCAACC CGCA GGTTGGCTTTTTC TCATTCAGGCTGGCT TERM 789 673118 - 673101 - T 100 -11.3 -5.24129 | opp_overlap 673095 673101 CCCTTGCATAAAAAA GCCAACC CGCA GGTTGGC TTTTTCTCATTCAGG TERM 790 673101 - 673118 + T 100 -11.3 -4.98255 | opp_overlap 673101, overlap 673095 CCCTTGCATAAAAAA GCCAACC CGCA GGTTGGC TTTTTCTCATTCAGG fur 673585 - 673139 - | ferric uptake regulator TERM 791 673868 - 673841 - R 100 -16.4 -3.19463 | overlap 673843 GGCATTATCTATTAA TACGGCGTAGAC ATGA GTCTACGCCGCA TCACATCAGGCATTG TERM 792 673866 - 673843 - R 100 -16.8 -3.15996 | overlap 673841 CATTATCTATTAATA CGGCGTAGAC ATGA GTCTACGCCG CATCACATCAGGCAT fldA 674404 - 673874 - | flavodoxin FldA ybfE 674906 - 674544 - | LexA regulated protein ybfF 675741 - 674977 - | hypothetical protein TERM 793 676130 - 676148 + G 81 -11 -3.64915 | opp_overlap 676129 676130, overlap 676125 ACGATTAAAGACAAG GTTCGCGC AAT GCGTGAAC TTCTGCTTTCTGACG seqA 675926 - 676471 + | replication initiation regulator SeqA TERM 794 676532 - 676511 - g 78 -10.9 -3.42621 | opp_overlap 676506 AATGGCAATCCACAA TCGTGCAGG CCAA CCTGCACAA CAGAGTGATTTGATT pgm 676497 - 678137 + | phosphoglucomutase TERM 795 678156 - 678175 + T 100 -11.4 -5.41359 | opp_overlap 678156 CATTTAATAAAAAAA GGGCGGTC GCAA GATCGCCC TTTTTTACTTTGCTT TERM 796 678175 - 678156 - T 100 -9.2 -5.8187 | opp_overlap 678156 CATTTAATAAAAAAA GGGCGGTC GCAA GATCGCCC TTTTTTACTTTGCTT potE 679512 - 678193 - | putrescine transporter speF 681707 - 679509 - | ornithine decarboxylase TERM 797 681004 - 680990 - G 74 -7.8 -4.03234 | opp_overlap 681001 CCGTTTCCAGATAAA CCGGTG TTG CACCAG CCTGTAGCAACGCTC TERM 798 682425 - 682409 - R 71 -7.3 -4.15328 | opp_overlap 682409, overlap 682420 AATTCAAAGCATAAA CCGATAT CCA ATACCGG TTTCAGTAATGAAGT kdpE 683074 - 682397 - | DNA-binding transcriptional activator KdpE kdpD 685755 - 683071 - | sensor protein KdpD TERM 799 684413 - 684399 - G 73 -11.4 -2.82519 | overlap 684396 TCACCACATTAATGA CGGTGG CAA CCACCG AAGGCCAGCGTCCAT TERM 800 685280 - 685250 - G 74 -2.5 -5.08824 | gap 1, opp_overlap 685256, overlap 685253 GCGGCATCGAAAAAA GGAT-CGGGCACGG TTTC CCGTACCTGAATTC CGGTGACGCCGCTGA TERM 801 685425 - 685404 - G 73 -11.6 -2.64416 | opp_overlap 685404, overlap 685403 TAGGGTGACGAGAAC CTGGCGCA TTACTG TGCGCCAG TTCGTCCATTAAGAT TERM 802 685404 - 685425 + g 81 -12.3 -3.22091 | opp_overlap 685404 685403 TAGGGTGACGAGAAC CTGGCGCAT TACT GTGCGCCAG TTCGTCCATTAAGAT kdpC 686320 - 685748 - | potassium-transporting ATPase subunit C kdpB 688377 - 686329 - | potassium-transporting ATPase subunit B TERM 803 686627 - 686610 - G 77 -9.9 -3.61517 | opp_overlap 686608 ACGCCGCCGGAATAA TGGCGAA GTAT TTCGCCA CATCGTTGGCAATGC TERM 804 687367 - 687383 + g 74 -2.2 -5.14563 | gap 1, overlap 687368 CAGCGAAGCCAGTTG TGC-GGC GTCA GCCAGCG TTTTTTCATCCACGC TERM 805 687671 - 687655 - G 74 -7.9 -4.11216 | overlap 687656 GCCCCACGCGGAAAA CGGCCAC AGC GTGGCGG TTGCCAGTAAAAAGA kdpA 690073 - 688400 - | potassium-transporting ATPase subunit A kdpF 690162 - 690073 - | KdpF protein TERM 806 690275 - 690264 - H 82 -5.8 -5.14894 | opp_overlap 690264 AAAAAAGTATAAAAA TGGC AAAA GCCA TGATTTAACTAATGT ybfA 690475 - 690681 + | hypothetical protein TERM 807 690729 - 690708 - f 100 -17.3 -4.28375 | opp_overlap 690708 TGAATACATTGAAAA CCGCCAGCG GAAA CGCTGGCGG TTTTTTGTATCAGGA TERM 808 690708 - 690729 + F 100 -17.3 -5.36441 | opp_overlap 690708 TGAATACATTGAAAA CCGCCAGCG GAAA CGCTGGCGG TTTTTTGTATCAGGA SSON_0652 690923 - 691681 + | hypothetical protein SSON_0653 691896 - 693431 + | putative transposase TERM 809 693506 - 693487 - g 100 -15 -3.76952 | CTGACCCAACTGAAA CTCCCGGC GATG GCCGGGAG CCTGATACGGCAACG TERM 810 693657 - 693633 - g 93 -5.8 -5.24531 | gap 1 ACGGTTGAGAAAAAA TGCCTGCCTGA AATA TCAGGCA-ACA CCGGAAGGGCTGCGT SSON_0654 693448 - 694203 + | putative transposase subunit TERM 811 694362 - 694380 + G 75 -6.7 -4.30844 | gap 1, overlap 694365 AGCAGGCCATTTCCG GCGGGACG GAAC CGTCC-GC TTTTCCTGATACCCT TERM 812 694938 - 694960 + G 70 -5.6 -4.34402 | gap 1 TCACGCGCATCACCA CGCCGGATG GCAGGG CATC-GGCG TTTTACTATAACCAC rhsA 694244 - 697630 + | rhsA protein in rhs element SSON_0656 697875 - 698378 + | IS1 ORF phrB 699922 - 698504 - | deoxyribodipyrimidine photolyase TERM 813 698948 - 698958 + g 81 -8.2 -4.30014 | opp_overlap 698948 698947 AGCGGCATCAACAAT CGGG TAT CCCG TTTTGCCTTCCTGCC ybgA 700428 - 699919 - | hypothetical protein SSON_0659 701460 - 700957 - | IS1 ORF ybgH 703240 - 701759 - | putative transport protein TERM 814 704052 - 704076 + G 70 -3.5 -4.71426 | gap 1, overlap 704051 704055 AAAGTTTTATCGATA GCG-CCGCGC GTTTTG GCGTGGATGC TTTTATTACTGGCGA ybgI 703511 - 704254 + | putative hydrolase-oxidase TERM 815 704509 - 704534 + G 72 -6.7 -4.20918 | opp_overlap 704509 GCTGGTGGGAGGAGA GCGAGGCCCTG GAAC CTGAGTCTCGC TTTATTGAAATTCCG ybgJ 704277 - 704933 + | putative carboxylase ybgK 704927 - 705859 + | putative carboxylase TERM 816 706025 - 706042 + G 78 -8.5 -4.25104 | TGGCGCTCACCCGAG TTTTCCC GACA GGGAAAA TTTTGGTCGCAGCGC ybgL 705849 - 706583 + | hypothetical protein nei 706619 - 707410 + | endonuclease VIII abrB 708498 - 707407 - | putative transport protein TERM 817 708596 - 708569 - R 85 -12.8 -3.35522 | overlap 708567 CAATTTTCTGAAAGA GATGCCCTTTCC GGCT GCAAAGGGCATC ATGGCAAATCAGTTA ybgO 709696 - 708605 - | hypothetical protein TERM 818 709316 - 709326 + gr 72 -4.6 -4.7078 | AATACACTGGTTAGT GTCG ATG CGGC TTTTTCCCTGGTTGG ybgP 710394 - 709663 - | putative chaperone TERM 819 710095 - 710083 - GR 71 -3.3 -4.8667 | CATATTGTAGAAAAA TAGCG TTT CGCGA TCGCCCGGTAATTTT TERM 820 711540 - 711550 + r 71 -6.8 -4.0648 | GAAATCGTGCTGTTA GTGG CAT CCAC TTGTTTGCTGTAATT TERM 821 712710 - 712723 + r 74 -3.8 -5.01811 | opp_overlap 712701 ACAAAATACTCACCG GGAG CAATGA CTCC TTTTTCCTTTAATAA TERM 822 712907 - 712890 - R 100 -14.1 -3.76781 | AAATATTTTATGAAA GGCGGCG ATAG CGCCGCC AAAGTAATACTTATT ybgD 713484 - 712918 - | putative fimbrial-like protein TERM 823 713536 - 713552 + r 73 -2.3 -5.24003 | overlap 713538 GGTGCAAGAATATCT TATTTGA TTG TCGAATG TTTTTAGTTTTTCTT TERM 824 713701 - 713721 + r 74 -5.5 -4.65032 | opp_overlap 713701 713699 713703, overlap 713703 TAACTGAGAGGAAGA TAGATGATT AAA AATCATCGA TTTGTTTATAATTTA TERM 825 713769 - 713780 + r 73 -2.2 -5.27023 | TAGAATATATGAATG TCCG ATAG TGGA TTTTATTTTTACAAT TERM 826 713847 - 713820 - R 100 -15 -4.96848 | opp_overlap 713819 713818 713816 TTGGGCATATAAAAA TTAACCCGCCAT TTGA ACGGCGGGTTAA AATATTTACAACTTA gltA 715157 - 713874 - | type II citrate synthase TERM 827 715965 - 715976 + G 70 -5.8 -4.1822 | CTCCATCGCGTTTCC GGTG TGAT CACC TTTGTTGCAGTGGGC sdhC 715866 - 716255 + | succinate dehydrogenase cytochrome b556 large membrane subunit sdhD 716249 - 716596 + | succinate dehydrogenase cytochrome b556 small membrane subunit TERM 828 717356 - 717309 - g 70 -11.2 -2.83299 | gap 1, overlap 717302 717308 GCAGGATATGGAAAT GTGGCAATTCCACCCG-ACCGGC ATT GCCGGTGCGGGCGTACTGGTCAC CGAAGGTTGCCGTGG sdhA 716596 - 718362 + | succinate dehydrogenase flavoprotein subunit sdhB 718378 - 719094 + | succinate dehydrogenase iron-sulfur subunit TERM 829 719114 - 719160 + F 70 -10.7 -2.57931 | opp_overlap 719111 719096 719114 719113 719136 719139, overlap 719113 719136 TAGGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCA ACCAG TGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA TERM 830 719285 - 719228 - g 72 -4.3 -4.67607 | gap 1, opp_overlap 719237 719238, overlap 719229 719237 719238 719276 GGCGTAACAAAGAAA TGCAGGAAATCTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAGG-TTCCTTCG CGAGCCACTACATAG TERM 831 719276 - 719238 - g 71 -11.2 -2.89178 | opp_overlap 719237 719238, overlap 719237 719229 719228 AGAAATGCAGGAAAT CTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAG GTTCCTTCGCGAGCC SSON_0676 719153 - 719413 + | hypothetical protein TERM 832 719954 - 719938 - g 83 -5.1 -5.11063 | AGCACCGAAGAAAAA CGCTG GATCCAA CAGCG TATCGAGTCTGGTCG TERM 833 720010 - 719998 - g 100 -7.7 -5.48063 | AGCGAAGAGAAAAAA CGCTT CTT AAGCG AACTGACCGCCGCTG TERM 834 720244 - 720217 - g 71 -2 -5.00616 | gap 1, opp_overlap 720225, overlap 720219 GTGCTGGGTAAAAAA CCGCAAGACTTGT TCG ACGAGT-TTGCCG GTAAACATAAAGAAC kgd 719395 - 722196 + | alpha-ketoglutarate decarboxylase TERM 835 722758 - 722742 - g 70 -3.6 -4.67353 | GCACGTAGTGAAAAA CGTGTC CCGAT GACTCG CCTGCGTAAGCGTGT sucB 722211 - 723428 + | dihydrolipoamide acetyltransferase TERM 836 723449 - 723483 + F 79 -10.8 -3.55444 | TAAGCTTCACCTGCA CTGTAGACCGACGT GGATAGG GTGTCGGTCTACGG TTTAAAAGATAACGA TERM 837 723947 - 723927 - g 73 -4 -4.81249 | gap 1 GTGGAAATCGAAAAA GTGGCGGAA GAAA CTCCGC-AC CTGATCCACAAAGTT TERM 838 724593 - 724580 - g 76 -9.5 -3.73068 | TCTGGAAGGTAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 723522 - 724688 + | succinyl-CoA synthetase subunit beta sucD 724688 - 725557 + | succinyl-CoA synthetase subunit alpha TERM 839 725633 - 725650 + T 100 -11.3 -5.39755 | GGTTTCGACATGGTT GGCCATC GTAT GATGGCC TTTTTTGTGCTTATC farR 726383 - 725661 - | DNA-binding transcriptional repressor MngR TERM 840 727650 - 727635 - g 77 -8.2 -4.03234 | opp_overlap 727635 727634 TCTCTGGCAGATAAA CCGGCG TTAG CGCCAG GCTTTGCGGCTGGAC hrsA 726492 - 728468 + | 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC TERM 841 731098 - 731125 + G 91 -10.6 -4.23213 | overlap 731087 731099 TTGACAAAGGGCGCT TTGTTCATGCCG GATA CGGCATGAACGC TTTATTCGGTCTACA TERM 842 731099 - 731124 + G 89 -14.1 -3.13446 | overlap 731087 731098 TGACAAAGGGCGCTT TGTTCATGCCG GATA CGGCATGAACG CTTTATTCGGTCTAC TERM 843 731231 - 731246 + G 85 -6.8 -4.85782 | TATCTTCACTCTCAA GCCACG TATA TGTGGC TTTATTTTTAACAAA SSON_0684 731067 - 731294 + | hypothetical protein cydA 731887 - 733458 + | cytochrome d terminal oxidase polypeptide subunit I cydB 733474 - 734613 + | cytochrome d terminal oxidase polypeptide subunit II TERM 844 734776 - 734803 + G 81 -12.1 -3.21595 | gap 1, opp_overlap 734782, overlap 734782 734795 CTTGTATGCGGTAAT GGACAAGCGCCC CCTGC GGGCGCTT-TCC TTCGTGATGGCGCTT TERM 845 734798 - 734782 - g 76 -10.8 -3.41878 | opp_overlap 734782 734776 734795 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 846 734782 - 734798 + G 86 -10.8 -3.97042 | opp_overlap 734782, overlap 734776 734795 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG ybgE 734741 - 735034 + | hypothetical protein TERM 847 735055 - 735080 + F 82 -7.6 -4.63184 | opp_overlap 735056, overlap 735056 AATTCTCTTTAAAAA ATTATGGGCC GCTCCA GGCCCATAAA TTTTTACGCTCCCTT TERM 848 735056 - 735079 + F 79 -11.1 -3.37188 | opp_overlap 735056, overlap 735055 ATTCTCTTTAAAAAA TTATGGGCC GCTCCA GGCCCATAA ATTTTTACGCTCCCT TERM 849 735079 - 735056 - f 100 -11.1 -5.00884 | opp_overlap 735056 735055 ATTCTCTTTAAAAAA TTATGGGCC GCTCCA GGCCCATAA ATTTTTACGCTCCCT ybgC 735184 - 735588 + | acyl-CoA thioester hydrolase YbgC tolQ 735585 - 736277 + | colicin uptake protein TolQ tolR 736281 - 736709 + | colicin uptake protein TolR TERM 850 737144 - 737127 - g 77 -3.4 -5.1244 | gap 1, overlap 737130 TCAGGAACAGAAAAA GCAGGCT GAAGA AGCC-GC AAAACAGGCCGAGTT TERM 851 737348 - 737329 - g 87 -4.8 -5.27923 | overlap 737305 GAAGCGCAGAAAAAA GCCGAGGC AGCC GCTGCGGC ACTGAAGAAGAAAGC TERM 852 737387 - 737362 - g 70 -4.5 -4.46854 | overlap 737377 GCACTGAAGAAGAAA GCGGAAGCGGC AGAA GCTGCTGCAGC TGAAGCAAGAAAGAA TERM 853 737426 - 737404 - g 81 -6.2 -4.73297 | overlap 737405 GAAGCAAGAAAGAAA GCGGCAGC AGAGAAA GCTGCAGC CGACAAAAAAGCAGC TERM 854 737428 - 737405 - g 71 -9.5 -3.42352 | overlap 737404 AAGCAAGAAAGAAAG CGGCAGCAG AGAAAG CTGCAGCCG ACAAAAAAGCAGCAG TERM 855 737456 - 737437 - g 87 -4.9 -5.26316 | overlap 737438 737449 737450 GCAGCCGACAAAAAA GCAGCAG AAAAAG CGGCTGC TGATAAGGCAGCAGC TERM 856 737471 - 737449 - g 83 -6.2 -4.95806 | overlap 737437 737438 737450 737467 AAAGCAGCAGAAAAA GCGGCTGC TGATAAG GCAGCAGC TGATAAGAAAGCAGC TERM 857 737504 - 737482 - g 90 -9.8 -4.32177 | overlap 737467 737497 737499 GCAGCTGATAAGAAA GCAGCGGC AGAAAAA GCCGCCGC AGACAAAAAAGCGGC TERM 858 737522 - 737497 - g 85 -6.8 -4.84359 | overlap 737482 737499 737515 737516 GCAGCGGCAGAAAAA GCCGCCGC AGACAAAAAA GCGGCAGC GGCAAAAGCAGCGGC TERM 859 737525 - 737515 - g 82 -2.4 -5.36441 | overlap 737497 737499 737516 GCCGCAGACAAAAAA GCGG CAG CGGC AAAAGCAGCGGCAGA TERM 860 737552 - 737530 - g 83 -9.8 -4.11216 | overlap 737516 737545 737547 GCGGCAGCGGCAAAA GCAGCGGC AGAAAAA GCCGCCGC AGACAAAAAAGCGGC TERM 861 737570 - 737545 - g 85 -6.8 -4.84359 | overlap 737530 737547 737563 GCAGCGGCAGAAAAA GCCGCCGC AGACAAAAAA GCGGCAGC GGCAAAAGCAGCAGC TERM 862 737615 - 737563 - g 100 -8.2 -5.36441 | opp_overlap 737608, overlap 737545 737547 737578 737593 737608 737609 GCCGCAGACAAAAAA GCGGCAGCGGCAAAAGCAGCAGCT GAAAA AGCCGCTGCAGCAAAAGCTGCCGC AGAGGCAGATGATAT TERM 863 737600 - 737578 - g 91 -11.3 -4.11216 | overlap 737563 737593 GCGGCAGCGGCAAAA GCAGCAGCT GAAAA AGCCGCTGC AGCAAAAGCTGCCGC TERM 864 737621 - 737593 - g 100 -13.1 -4.63527 | opp_overlap 737608, overlap 737578 737563 737608 737609 GCAGCAGCTGAAAAA GCCGCTGCAGCAA AAG CTGCCGCAGAGGC AGATGATATTTTCGG tolA 736774 - 738006 + | cell envelope integrity inner membrane protein TolA tolB 738139 - 739431 + | translocation protein TolB pal 739466 - 739987 + | peptidoglycan-associated outer membrane lipoprotein TERM 865 740051 - 740067 + G 100 -15.1 -4.25104 | TTACTGGTTGGTATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCACC TERM 866 740249 - 740236 - g 70 -5.3 -4.29738 | TCAGATTCAGGAAAA TCAGT ATCA ACTGA ATCAGGTCGTGGAGC ybgF 739997 - 740788 + | hypothetical protein TERM 867 740831 - 740796 - f 70 -9.1 -3.4285 | opp_overlap 740800, overlap 740798 CGATGTAATGCATAA CACACGACCAGAAGT CGCATT ATTTCTGGTCGTGTC GTGCGAATCATAAGC TERM 868 740829 - 740798 - f 79 -11.7 -3.28368 | opp_overlap 740800, overlap 740796 ATGTAATGCATAACA CACGACCAGAAGT CGCATT ATTTCTGGTCGTG TCGTGCGAATCATAA TERM 869 740800 - 740827 + F 72 -10.7 -2.79302 | opp_overlap 740798 740796 GTAATGCATAACACA CGACCAGAAGT CGCATT ATTTCTGGTCG TGTCGTGCGAATCAT TERM 870 741083 - 741068 - f 70 -9 -3.40899 | overlap 741082 AAGCGTGTAGGATAA CGTTGC GTCA GCAACG GCCCGTAGGGCGAGC TERM 871 741599 - 741567 - f 71 -9.9 -3.19463 | opp_overlap 741568 741576, overlap 741568 741576 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGAGATATTCAA TERM 872 741568 - 741598 + F 87 -14.9 -2.91735 | opp_overlap 741567 741568 741576, overlap 741576 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGAGATATTCA TERM 873 741598 - 741568 - f 80 -13.4 -2.51464 | opp_overlap 741568 741576, overlap 741567 741576 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGAGATATTCA TERM 874 741576 - 741590 + F 100 -8.5 -5.24989 | opp_overlap 741576 741568 741567, overlap 741568 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGA TERM 875 741590 - 741576 - f 100 -9.2 -5.17576 | opp_overlap 741568 741576, overlap 741568 741567 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGA TERM 876 741640 - 741618 - f 77 -10.6 -3.45231 | overlap 741616 741619 TGAGATATTCAAAGA TTCGAACCTG CAG CAGGTTCGAG TTGAGCGCAGCGAAA TERM 877 741639 - 741619 - f 83 -14.1 -2.66656 | overlap 741618 741616 GAGATATTCAAAGAT TCGAACCTG CAG CAGGTTCGA GTTGAGCGCAGCGAA TERM 878 741683 - 741659 - f 74 -8.6 -3.96483 | gap 2 AGCGCAGCGAAACAA CGGAGCCGCTCG CGG CGA-CGGC-CCG AAGGGCGAGCGAAGC TERM 879 741755 - 741723 - f 71 -9.9 -3.19463 | opp_overlap 741724 741732, overlap 741724 741732 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATTCAGGCATCCTCA TERM 880 741724 - 741754 + F 88 -14.9 -3.03441 | opp_overlap 741723 741724 741732, overlap 741732 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATTCAGGCATCCTC TERM 881 741754 - 741724 - f 80 -13.4 -2.51464 | opp_overlap 741724 741732, overlap 741723 741732 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATTCAGGCATCCTC TERM 882 741746 - 741732 - f 100 -9.2 -5.17576 | opp_overlap 741732 741724, overlap 741724 741723 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATTCAG TERM 883 741732 - 741746 + F 100 -8.5 -5.27779 | opp_overlap 741724 741723 741732, overlap 741724 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATTCAG TERM 884 741905 - 741935 + F 79 -9 -4.19238 | opp_overlap 741904 741914 ATAAAACAAATTACG CCGATAGTAGCGAA TAT TACGCTAATGTCGG TTTTAACGTTAAGCC TERM 885 743792 - 743772 - g 77 -9.7 -3.59979 | overlap 743776 743786 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 886 743788 - 743776 - g 75 -6.9 -4.44046 | overlap 743772 743786 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_0701 742950 - 744122 + | IS21 ORF1 SSON_0702 744122 - 744919 + | IS21 ORF2 TERM 887 745892 - 745862 - g 100 -15.5 -3.15544 | opp_overlap 745858 TCGGATGTGGATCAA CAGCGCACGTGAA AGAGG CTCACGCGCGCTG TCCCATTAATGGTGA pnuC 745182 - 745901 + | required for NMN transport ybgR 746839 - 745898 - | zinc transporter ZitB TERM 888 746544 - 746533 - G 70 -4.4 -4.53034 | overlap 746542 CCCAGACAATCAAAA TGGT AATT ACCA CGAGGGCGATGGCAT TERM 889 746931 - 746912 - R 93 -9.3 -4.78661 | opp_overlap 746912 746911 AGTGAAAAATTAAAA GGGAGAG ACTCCG CTCTCCC ATTATTGGCTATTTT TERM 890 746962 - 747016 + r 75 -2.9 -5.16841 | gap 1, overlap 746969 GCAGGGTTACTGCGT GGTAC-CGTCGGTTTTGGTATCGACA TCAT TATTGATGCCATCACCGATTTGTACC TTTTTATTGATATCC SSON_0705 747333 - 746953 - | putative homeobox protein TERM 891 747049 - 747067 + g 72 -5.2 -4.51363 | ACATCGACCATCTTT GCACATGG TGT TCTTGTGC TTTTCATCTTTGGTC TERM 892 747512 - 747524 + H 77 -3.3 -5.16071 | AGATCTCGTTTTTCG CGACA ATC TGGCG TTTTTCTTGCTAATT aroG 747649 - 748701 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 893 748786 - 748754 - T 79 -12.7 -2.87136 | opp_overlap 748753 748749, overlap 748764 748766 CGATGAATCACCACA GGCCTGATAAGACGC GCA GCGTCGCATCAGGCA ATGTGCTCCATTGTT TERM 894 748776 - 748764 - T 70 -9.1 -3.30771 | opp_overlap 748753 748749, overlap 748754 748766 CCACAGGCCTGATAA GACGC GCA GCGTC GCATCAGGCAATGTG TERM 895 748834 - 748814 - T 100 -8.3 -5.5112 | opp_overlap 748814 GTTAGCAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTTAAA TERM 896 748814 - 748834 + T 79 -8.3 -4.2687 | opp_overlap 748814 GTTAGCAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTTAAA gpmA 749612 - 748860 - | phosphoglyceromutase 1 TERM 897 749302 - 749312 + g 78 -8.2 -4.1552 | overlap 749288 TCGCCATACTTTTCG GCGG TTT CCGC TTTGTTCAGACCCTG TERM 898 749480 - 749495 + g 74 -6.1 -4.45664 | overlap 749478 AACCTTCCTCTTTCA GCAGC TTACCT GCTGC TTTTGCTTCGCTTAC TERM 899 749808 - 749792 - R 87 -10.1 -4.27467 | CAATATGAAGATAAA GCCCTCA TGA CGAGGGC TTAACATTACTCAGC galM 750855 - 749815 - | aldose 1-epimerase galK 751997 - 750849 - | galactokinase galT 753047 - 752001 - | galactose-1-phosphate uridylyltransferase TERM 900 752834 - 752850 + g 81 -6.5 -4.8667 | overlap 752835 TAGTGAAAACGTAAG TCCCGGT GTA ATCGGGG TTTTTATCGCCTGTC galE 754073 - 753057 - | UDP-galactose-4-epimerase TERM 901 753311 - 753326 + g 77 -6.1 -4.65895 | TGTAGATGTGTACGC CTGGC TTGTTC GCCAG TTTTTCCATCGCCAC TERM 902 753561 - 753578 + g 70 -4.1 -4.60041 | gap 1, overlap 753563 753564 GCGCAGCAGGGCAAT GCTCCAGT CCG GCTGG-GC TTTTTGCAGGTCGGT modF 755806 - 754334 - | putative molybdenum transport ATP-binding protein ModF TERM 903 755032 - 755005 - G 75 -7.1 -4.31433 | gap 1, opp_overlap 755005 755008 GATCGTTATAAGAAA CCACGCCATTGT TCAGC ACAAT-GCGCGG TTCGTTGGCGGGTAA TERM 904 755367 - 755342 - G 86 -11.1 -3.90559 | opp_overlap 755362 ATCAAGAATCAACAA GTCAGGCTCCG ACAT CAGCGCCTGAC ACAGCAGGGTTTTTC TERM 905 755561 - 755575 + g 77 -6.4 -4.67904 | overlap 755562 GTTATTCCGCTGCCA TTCGTC GCT GACGAG TTTTTGCAATTGCTC modE 756662 - 755874 - | DNA-binding transcriptional regulator ModE TERM 906 755964 - 755980 + g 81 -10.9 -3.57462 | CGCTTCATTTACCGG CACTGTG GCG CACAGTG TTTGCCCGTCGGGTA SSON_0714 756791 - 756940 + | hypothetical protein TERM 907 756950 - 756967 + F 91 -8.4 -4.96501 | CATTGATTCCCTGAA TGCCCG CTTAGT CGGGCA TTTCTTTTTCTCAAC TERM 908 757731 - 757721 - g 72 -6.8 -4.17491 | AGCAAAGGGGTAAAA GTGG TTG CCAC CTTCCCGGAAGATTC modA 757106 - 757879 + | molybdate transporter periplasmic protein TERM 909 758266 - 758284 + G 79 -4.4 -4.97158 | overlap 758267 GCCGCAAGAACACTA GGTGCCGG GCG CTGGCGCG TTTTCTTTACTATCA modB 757879 - 758568 + | molybdate ABC transporter permease protein modC 758571 - 759629 + | molybdate transporter ATP-binding protein TERM 910 759642 - 759622 - f 71 -9.7 -3.2964 | AAAGTGTGTCGATAA CCGCCTGAT TAA ATCAGGTGG CTATAAATGAACTGG SSON_0718 760456 - 760758 + | IS600 ORF1 SSON_0719 760899 - 761612 + | IS600 ORF2 rem 762288 - 762001 - | hypothetical protein TERM 911 762460 - 762424 - R 100 -8.6 -5.74288 | gap 1, opp_overlap 762424 ATAAACAACAAAAAA CCCGCCGAAACGCTGAG AGAT CACAGCGATG-GGCGGG TTAAGTGCGGGTGCG TERM 912 762664 - 762679 + r 83 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 913 762758 - 762808 + r 100 -12.1 -4.64844 | gap 1, opp_overlap 762725 CAAAGCATGAAATTG GCCTCAGATTAATGTTAAGCGTCT TGCC GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC SSON_0721 763607 - 762921 - | hypothetical protein SSON_0722 764111 - 763755 - | putative bacteriophage protein SSON_0723 765352 - 764606 - | putative replication protein TERM 914 765751 - 765771 + H 84 -8.3 -4.5852 | overlap 765752 TTTTTGATCCGTTTG TGTAACGCT GGC AGCGTTACC TTTTCGTTTCAGTTC TERM 915 765752 - 765770 + H 82 -11.8 -3.34028 | overlap 765751 TTTTGATCCGTTTGT GTAACGCT GGC AGCGTTAC CTTTTCGTTTCAGTT SSON_0725 766100 - 766402 + | IS600 ORF1 SSON_0726 766543 - 767256 + | IS600 ORF2 TERM 916 767419 - 767439 + T 93 -12.7 -3.68351 | CATTTGTTTTCACCT TGTAACGCT CGC AGCGTTACA TTTAACTGATACCGA SSON_0727 767789 - 767484 - | putative bacteriophage protein TERM 917 768211 - 768201 - H 78 -5.4 -4.87626 | CCCTAATATGAAAAA CGAA ACC TTCG GTGCTCGCCTCTTAC SSON_0728 768804 - 768959 + | hypothetical protein SSON_0729 769036 - 769338 + | IS600 ORF1 SSON_0730 770525 - 769686 - | IS911 ORF2 TERM 918 770094 - 770105 + g 77 -5.8 -4.63218 | opp_overlap 770090 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG TERM 919 770446 - 770466 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 920 771051 - 771066 + r 77 -3.9 -5.26316 | GGAACACACTCTTAA CTGCC TTGGCT GGCGG TTTTTTGTACAGTGC TERM 921 771225 - 771202 - R 72 -6.6 -4.2711 | overlap 771203 AGAAAAATAATGAAA TGCCCCCCTC CGGG GAGGAGGACC GTAGAAAAAAGGACC TERM 922 771224 - 771203 - R 71 -10.1 -3.13826 | overlap 771202 GAAAAATAATGAAAT GCCCCCCTC CGGG GAGGAGGAC CGTAGAAAAAAGGAC TERM 923 771405 - 771429 + r 100 -11.5 -5.64421 | GGTAAAGGTGATTCA GGCCATCAG AGTTTTG CTGATGGCC TTTTTTCTTTCCGAT SSON_0731 772687 - 771491 - | ISSfl2 ORF TERM 924 772524 - 772549 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 772504, overlap 772510 772525 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 925 772992 - 772944 - R 73 -2.2 -5.13473 | opp_overlap 772970 772971 772978 772983 772987, overlap 772946 772950 772952 ATCAGATGGAAAAAA TATCAACAGGCATTGCCTACGG CACCT CCGCCGGCAGTGCCGGCTACTG GTTTTTGCAGTGGTT TERM 926 772986 - 772950 - R 79 -10 -3.66995 | opp_overlap 772970 772971 772978 772983, overlap 772946 772944 772952 TGGAAAAAATATCAA CAGGCATTGCCTACGG CACCT CCGCCGGCAGTGCCGG CTACTGGTTTTTGCA TERM 927 772984 - 772952 - R 79 -11.2 -3.39574 | opp_overlap 772970 772971 772978 772983, overlap 772950 772946 772944 GAAAAAATATCAACA GGCATTGCCTACGG CACCT CCGCCGGCAGTGCC GGCTACTGGTTTTTG SSON_0732 774039 - 773134 - | insertion element IS2 transposase InsD SSON_0733 774476 - 774973 + | lysozyme-like protein SSON_0734 774970 - 775440 + | endopeptidase TERM 928 776425 - 776397 - gf 78 -6.1 -4.57569 | GCAGGTTTGCAAAAA TGGTACGCA AAAAAGGAAAG TGCGTACCA GCAGAAAGCCTGCCA TERM 929 776522 - 776500 - gf 71 -7.7 -3.84266 | overlap 776501 ACACCGGATACGAAA CCGATACGC GGAAT GCGTACCGA TCCCCCGACTAACCC SSON_0735 776236 - 777000 + | putative bacteriophage protein TERM 930 778261 - 778241 - gf 86 -3.9 -5.37593 | overlap 778243 778244 GTCGAAAGTAAAAAA GACCTCGCA AAA CGCGAGATA CCGTCACCAAACGTT TERM 931 778259 - 778243 - gf 72 -6.5 -4.31698 | overlap 778241 778244 CGAAAGTAAAAAAGA CCTCGCA AAA CGCGAGA TACCGTCACCAAACG SSON_0736 776933 - 778354 + | putative bacteriophage protein SSON_0737 778738 - 779820 + | putative bacteriophage protein SSON_0738 780458 - 781678 + | putative bacteriophage protein SSON_0739 781682 - 782188 + | putative bacteriophage protein SSON_0740 782453 - 782956 + | IS1 ORF TERM 932 784335 - 784321 - g 85 -7 -4.7373 | overlap 784323 CTACTGCATGAAAAA GGCCGC TAT GCGGTC GGGCAGGGACCAATG ybhE 783379 - 784374 + | 6-phosphogluconolactonase TERM 933 784387 - 784410 + T 93 -15.3 -3.10053 | TAACCGCTGATTTAC CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT ybhD 785431 - 784415 - | putative transcriptional regulator LYSR-type TERM 934 784535 - 784514 - G 82 -2.9 -5.17576 | opp_overlap 784523, overlap 784506 CAGCAAGGCAAAAAA GCGTTCTGC TGCC GGAGAAAGC ACGGCATCTTTGCGG TERM 935 785572 - 785562 - R 88 -5.4 -5.55664 | overlap 785542 TTATTATGAAAAAAA TACC CTG GGTA ATGACTCCAACTTAT SSON_0743 786087 - 785584 - | IS1 ORF TERM 936 786355 - 786344 - g 86 -5.8 -5.1101 | opp_overlap 786344 GCATCACCCAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT ybhJ 786323 - 788503 + | putative enzyme TERM 937 788525 - 788553 + T 76 -11.8 -2.73468 | overlap 788549 788552 CCATGTGAATGTAGG TCGCATTCGGCA CTTAT TGTCGGATGCGA TGCTTGCGCATCTTA TERM 938 788655 - 788703 + T 75 -9.5 -3.53811 | opp_overlap 788700, overlap 788642 788645 788685 788688 GATGCGATGCTTGCG CATCTTATCCGACCTACAAATCG CAT CGAACCGTAGGCCGGATAAGGCG TTTACGCCGCATCCG ybhC 790020 - 788737 - | putative pectinesterase intE 790967 - 790155 - | putative integrase fragment SSON_0747 791708 - 790995 - | IS600 ORF2 SSON_0748 792151 - 791849 - | IS600 ORF1 SSON_0749 792167 - 793420 + | putative tail fiber protein SSON_0750 793371 - 793994 + | putative tail component of prophage TERM 939 794109 - 794132 + T 93 -10.2 -4.58395 | opp_overlap 794106 794105, overlap 794111 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 940 794111 - 794130 + T 100 -15 -3.90762 | opp_overlap 794106 794105, overlap 794109 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_1 795937 - 794174 - | invasion plasmid antigen TERM 941 796268 - 796234 - R 100 -10.1 -5.24129 | opp_overlap 796234 TGCGTTGACAAAAAA TTAGCGCAAGAGGAC AAAAA ATCACCTTGCGCTAA TGCTCTGTATCAGGT TERM 942 796512 - 796486 - R 83 -13.8 -2.53759 | opp_overlap 796483, overlap 796491 796493 AATACCTTTAAGTGA TACCAGATGGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA ybhB 796995 - 796519 - | putative kinase inhibitor protein bioA 798343 - 797054 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 943 797369 - 797381 + g 76 -9.1 -3.72576 | opp_overlap 797369 797368 GCCAGATTCGAGAAT CGCCA GGC TGGCG TTTGCTGCCGCGCAG bioB 798430 - 799470 + | biotin synthesis bioF 799467 - 800621 + | 8-amino-7-oxononanoate synthase bioC 800608 - 801363 + | biotin biosynthesis protein BioC bioD 801356 - 802033 + | dithiobiotin synthetase TERM 944 802829 - 802814 - g 72 -4.6 -4.63218 | opp_overlap 802815, overlap 802815 TTGCGCCCAACAAAA CGCTGG CGGC CCAGCT GTATGGCGAAATGAA TERM 945 803420 - 803410 - g 70 -6.8 -4.1421 | GAGATCAAAGAAGAA CTGG CCG CCAG ACGCAAAGTGCTGTT TERM 946 803463 - 803449 - g 75 -5.7 -4.67697 | overlap 803442 803451 TTGGAAAACAACAAA CTGCT GGAAG AGCAG CGGCTGACCCAGCGT uvrB 802612 - 804633 + | excinuclease ABC subunit B TERM 947 804724 - 804781 + T 77 -11.1 -3.12482 | opp_overlap 804725 804747, overlap 804725 GCAATACATTGAATT AGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCA CTTTGTCTTCAATAG TERM 948 804780 - 804725 - T 100 -16.8 -2.78868 | opp_overlap 804724 804725, overlap 804747 CAATACATTGAATTA GCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGC ACTTTGTCTTCAATA TERM 949 804725 - 804782 + T 74 -7 -4.21607 | gap 2, opp_overlap 804725 804747, overlap 804724 CAATACATTGAATTA GCGCG-GTT-TGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCAC TTTGTCTTCAATAGG ybhK 805733 - 804825 - | putative structural protein moaA 806130 - 807119 + | molybdenum cofactor biosynthesis protein A moaB 807141 - 807653 + | molybdopterin biosynthesis, protein B moaC 807656 - 808141 + | molybdenum cofactor biosynthesis protein C moaD 808134 - 808379 + | molybdopterin synthase small subunit TERM 950 808653 - 808663 + G 80 -5.4 -4.89852 | GGAATTATGGCCGGG CGAT GAA ATCG TTTTTGTCGGTGTCA MoaE 808381 - 808833 + | molybdopterin synthase large subunit ybhL 808970 - 809674 + | hypothetical protein TERM 951 809694 - 809712 + F 100 -8.1 -5.84381 | TTTTCACCATCACTA TCCCGGC CATGT GTCGGGA TTTTTTTCTTACTAA TERM 952 809794 - 809824 + F 70 -4.8 -4.42851 | opp_overlap 809801, overlap 809789 AATCGTTTTCCGTAT CCATAAATACAAAA GTA TTTTGTATGCGTGG TTTTAAATTTATTGA TERM 953 810199 - 810226 + G 85 -7 -4.76041 | gap 1 TGTATATGCCATTAT CATCGTGTTCAGC ACT GC-GGGCGCGATG TTTTTAATCAGTATG ybhM 809879 - 810592 + | hypothetical protein TERM 954 811119 - 811133 + T 87 -11.4 -3.86015 | opp_overlap 811109 811107 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA ybhO 812609 - 811368 - | cardiolipin synthase 2 ybhP 813367 - 812606 - | hypothetical protein TERM 955 812659 - 812696 + g 77 -6.2 -4.62783 | gap 1, overlap 812662 812662 AAAGGTGTCGCCATG TCCGCAGCGGCAACGCG GTTGG CGCGCTGGCGCTG-GCA TTTTTGACGTAGATC ybhQ 813500 - 813910 + | hypothetical protein ybhR 814978 - 813872 - | hypothetical protein TERM 956 814804 - 814838 + g 70 -10 -3.21912 | GCTCCACCGAATGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTAGTCACTTCCAGC ybhS 816122 - 814989 - | hypothetical protein ybhF 817851 - 816115 - | putative ATP-binding component of a transport system TERM 957 816971 - 816955 - G 70 -5.1 -4.41302 | CAGCAAATCAATAAA CGCATCT TCA AAACGCG GCGTAGTTTCGTTGA TERM 958 817609 - 817630 + g 93 -8.7 -4.88407 | gap 1, opp_overlap 817603, overlap 817609 817611 CGGCATATAGCCGAG C-ACGGCGTG CAG CGCGCCGTCG TTTTTGATTGGATCA TERM 959 817611 - 817627 + g 80 -11.5 -3.32518 | opp_overlap 817603, overlap 817609 817609 GCATATAGCCGAGCA CGGCGTG CAG CGCGCCG TCGTTTTTGATTGGA SSON_0774 818842 - 817844 - | hypothetical protein TERM 960 818363 - 818393 + g 81 -9.6 -4.13304 | TGCTGATTTCAGCGT TGCCTGCGCCTGGT CGC GCGAGGAGCGGGCA TTTTCCAGGTCATTT ybiH 819525 - 818842 - | putative DNA-binding transcriptional regulator TERM 961 819456 - 819468 + g 81 -4.8 -5.09173 | opp_overlap 819442 819443 ACTGCGCCAGTGCGG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 962 819526 - 819549 + H 73 -9.8 -3.41839 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCTATATG TERM 963 821060 - 821023 - g 85 -6.9 -4.86033 | gap 1, overlap 821024 821050 821051 AAACCTGCAGAAAAA CCGTCTCGCCGCCTCGGC GAT GCCAAACCGGC-AGGCGA ACAACAACGTCGCCG rhlE 819742 - 821106 + | ATP-dependent RNA helicase RhlE TERM 964 821226 - 821257 + T 75 -10 -3.53012 | opp_overlap 821236, overlap 821227 TTGCATGCTTTTGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTCACAACAAGCAC TERM 965 821227 - 821256 + T 81 -13.5 -2.71712 | opp_overlap 821236, overlap 821226 TGCATGCTTTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTCACAACAAGCA ybiA 821820 - 821338 - | hypothetical protein TERM 966 822195 - 822172 - g 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT GAGT ACCGCCAACG TGGCGTTGCAGGATC dinG 821940 - 824090 + | ATP-dependent DNA helicase DinG TERM 967 824073 - 824086 + F 71 -9.5 -3.25223 | opp_overlap 824069 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 968 824146 - 824173 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 824146 824144 824142 824165 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC ybiB 824118 - 825080 + | hypothetical protein TERM 969 825092 - 825115 + F 95 -12.5 -4.07568 | TTAATTCTTTTCTCA GCCGGATGA GCCATG TCATCCGGC TTTTACCCCACCGCA ybiC 825221 - 826306 + | hypothetical protein TERM 970 826334 - 826313 - T 100 -13.7 -5.81412 | GCCAGCTAAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT TERM 971 826458 - 826491 + T 70 -9.5 -3.07344 | opp_overlap 826468 826470 826471, overlap 826470 826471 GGTTCGGATTTTGTA GGCCTGATAAGACGC GGTA GCGTCGCATCAGGCA TCTGTTGCCGGATGC TERM 972 826470 - 826518 + T 82 -11.6 -3.37796 | opp_overlap 826468 826470 826471, overlap 826458 826471 GTAGGCCTGATAAGA CGCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 973 826517 - 826471 - T 70 -10.7 -2.5294 | opp_overlap 826458 826470 826471, overlap 826468 826470 TAGGCCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG TERM 974 826471 - 826517 + T 90 -15.1 -2.62463 | opp_overlap 826468 826471 826470, overlap 826458 826470 TAGGCCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG ybiJ 826795 - 826535 - | hypothetical protein TERM 975 826668 - 826686 + g 71 -3.1 -4.79657 | overlap 826654 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 976 826845 - 826860 + r 83 -4 -5.40072 | overlap 826846 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTACGAGAGA ybiI 827326 - 827060 - | hypothetical protein ybiX 828077 - 827400 - | putative hydroxylase TERM 977 827469 - 827479 + g 77 -8.2 -4.08767 | opp_overlap 827445, overlap 827467 GATCTCTTCACTTTC GCCG TAG CGGC TTTTCAGCGACTGAA TERM 978 827782 - 827738 - G 74 -8.5 -3.86524 | overlap 827739 ACAGCGTGGCAGAAA GGTCAGTACGCATCCAGCC GTTTTGT GGATGGCTGCGTACTGCGC CATCCACATGGAAAC TERM 979 828111 - 828094 - R 100 -12.7 -4.58283 | CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ATCTGAATCAGAAAT TERM 980 829728 - 829743 + r 70 -2.4 -5.03145 | TTTTTGACTTTGTCG CGTCCG GCAT CGTGCG TTTTTTCGCCCATTA TERM 981 830060 - 830050 - R 71 -6.8 -4.07124 | CACCACGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 982 830111 - 830140 + r 89 -9.3 -4.59109 | overlap 830113 ACCCACGCCGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 983 830113 - 830138 + r 100 -16.3 -3.90762 | overlap 830111 CCACGCCGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_0784 831468 - 830122 - | IS4 orf TERM 984 831483 - 831458 - G 100 -9.8 -5.61596 | opp_overlap 831458 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 985 831458 - 831483 + g 73 -9.1 -3.61398 | opp_overlap 831458 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 986 831539 - 831549 + r 84 -8.2 -4.57569 | opp_overlap 831526, overlap 831535 GATCGGCATTACCCA CGCC GGG GGCG TTTTTGAGCGCGTCG TERM 987 832089 - 832068 - R 74 -7.3 -4.23434 | opp_overlap 832068 CAAAACAGGCGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT ybiM 832508 - 832104 - | hypothetical protein TERM 988 832172 - 832190 + g 71 -3 -4.86033 | overlap 832173 TAATGACATAACCTT TCGCGC CTTGTTC GCGCGC TTTTTCTGCCAGTTT TERM 989 832346 - 832356 + g 71 -3.2 -4.77036 | CGGTGGCAATCAGTA GTGT GAG GCAC TTTTTCATAATGACA ybiN 832559 - 833566 + | putative SAM-dependent methyltransferase ybiO 835788 - 833563 - | hypothetical protein TERM 990 835138 - 835163 + g 74 -11.1 -3.18264 | overlap 835145 TTGGAAAGCGATGGT GCGACTGCCTG CATT CAGGTTGTCGC TTAATACCTGGCCGA TERM 991 835637 - 835650 + g 100 -4.5 -6.11243 | gap 1, overlap 835629 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTTGTTCGAT TERM 992 835904 - 835865 - R 78 -12.2 -2.60725 | opp_overlap 835867, overlap 835864 TTAAATGAGAGGAAT CTGGTGTGCCTCCCTTTC GGGT GAAAGGGAGGCAGAGAAG TTAAGAGACGTGCTG glnQ 836627 - 835905 - | glutamine ABC transporter ATP-binding protein glnP 837283 - 836624 - | glutamine ABC transporter permease protein glnH 838168 - 837422 - | glutamine ABC transporter periplasmic protein TERM 993 838287 - 838277 - R 80 -6.8 -4.59109 | opp_overlap 838277 838276 GAGATGCGGCAAAAA CGTG ATG CACG ATTTATAGGGCAATA TERM 994 838354 - 838312 - R 80 -12.8 -3.06315 | opp_overlap 838319 838353, overlap 838349 GCAATACCCTGAAGA TGCACCATTCTGGGGCACCA ATC TGGTGCGCTAAAATTGTGCA CTCAACACAGTGATT TERM 995 838415 - 838396 - R 77 -3.6 -5.16237 | opp_overlap 838396 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATGTGGAT TERM 996 838509 - 838531 + r 79 -7.6 -4.40804 | opp_overlap 838510, overlap 838510 GGGCTGCAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGGGTACTA TERM 997 838530 - 838510 - R 100 -13.3 -5.07652 | opp_overlap 838510 838509 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT TERM 998 838510 - 838530 + r 77 -11.1 -3.24 | opp_overlap 838510, overlap 838509 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT dps 839075 - 838572 - | DNA starvation/stationary phase protection protein Dps TERM 999 838979 - 838994 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTGTC TERM 1000 839333 - 839368 + r 71 -10.6 -2.71693 | opp_overlap 839336, overlap 839330 AGGAAAAGTAGCGAG AAATTCTGCATGGTTA TGCA TAACCATGCAGAAATG TAAATTTAATTAATG TERM 1001 839365 - 839336 - R 100 -16.7 -3.96827 | opp_overlap 839333 839330 AAAAGTAGCGAGAAA TTCTGCATGGTTA TGCA TAACCATGCAGAA ATGTAAATTTAATTA ybiF 840261 - 839374 - | threonine and homoserine efflux system TERM 1002 840453 - 840437 - H 79 -9.5 -3.72315 | opp_overlap 840437 840436, overlap 840435 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 840614 - 841129 + | outer membrane protein X TERM 1003 841151 - 841168 + T 100 -9.1 -5.79595 | opp_overlap 841151 TGGTGATATAAAAAA TCCGCCT CTCG GGGCGGA TTTTTTGTTTTAAGG TERM 1004 841168 - 841151 - T 100 -8.4 -5.36441 | opp_overlap 841151 TGGTGATATAAAAAA TCCGCC TCTCGG GGCGGA TTTTTTGTTTTAAGG ybiP 842761 - 841178 - | putative enzyme TERM 1005 841577 - 841602 + g 70 -4.7 -4.50159 | TAAATCGTCCGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTCGATTGCA TERM 1006 842732 - 842717 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGATTCTTTG TERM 1007 843012 - 843035 + H 74 -8.1 -3.8709 | opp_overlap 843014, overlap 843014 ATAAAAGCAGGAGGG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCGGAAGGTTT TERM 1008 843033 - 843014 - H 74 -10.7 -3.12803 | opp_overlap 843012 843014 AAAAGCAGGAGGGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT TERM 1009 843014 - 843033 + H 79 -10.7 -3.52113 | opp_overlap 843014, overlap 843012 AAAAGCAGGAGGGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT SSON_0796 843347 - 843814 + | manganese transport regulator MntR TERM 1010 844072 - 844084 + G 70 -6.9 -4.04319 | overlap 844066 ATGTTTATGGTGCTG GCGGC GGC GCTGC TTTCTACCTTTCTGA ybiR 843811 - 844929 + | hypothetical protein TERM 1011 844943 - 844971 + T 75 -11.1 -2.95113 | opp_overlap 844948, overlap 844948 AGGGTCTGGCAAATA AAAAAGGCGGATT ATG AGTCCGCCTTTTG CTTTAAGTTTTGAAG TERM 1012 844966 - 844948 - T 100 -8.8 -5.63517 | opp_overlap 844948 844943 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTTGCTTTAAGTTT TERM 1013 844948 - 844966 + T 95 -11 -4.59424 | opp_overlap 844948, overlap 844943 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTTGCTTTAAGTTT ybiS 845908 - 844988 - | hypothetical protein ybiT 846127 - 847722 + | putative ATP-binding component of a transport system SSON_0800 850265 - 847902 - | putative glucosidase TERM 1014 850210 - 850192 - G 71 -11 -2.87026 | TACAGGCACAGGATA TGCTGGCC ATC GACCAGCA GTTCAACGTGGTGGG SSON_0801 851581 - 850280 - | putative hexuronate transporter TERM 1015 851143 - 851115 - G 72 -4.6 -4.67353 | opp_overlap 851119, overlap 851119 GCACCGATGGAAAAA CCGA-CGCCTGC CCAGCCT GC-GGCGATCGG GCGTTCTGATTTTGG TERM 1016 851236 - 851225 - G 70 -7.2 -4.06687 | ACCGCCCATAAAGAA GCGC AACA GCGC CAGATGTCCCCAGTT TERM 1017 851511 - 851500 - G 88 -2.2 -5.53991 | CACCGAGCAAAAAAA GGAC CAGT ATCC ACCAACGCAGATTTT TERM 1018 852527 - 852543 + G 70 -7.3 -4.11216 | overlap 852528 CACCATGACCGTCAT TTGCTGA ATA TCAGCAG TTTTAGCGCTAAAGA TERM 1019 852592 - 852619 + G 72 -7.6 -3.96148 | AGCGTGGCTGGATGC CGCCAATGGCAA GACG TTGCCGACGGCG TTTCTGGTCGGCGGG SSON_0802 851876 - 852979 + | putative transcriptional regulator ybiU 854211 - 852946 - | hypothetical protein TERM 1020 853049 - 853059 + g 88 -8.2 -4.62069 | CGCGGGAAGTCGCCC GGCG ATG CGCC TTTTTCCAGTGCGGC TERM 1021 853591 - 853554 - G 100 -13.4 -4.08394 | overlap 853542 853555 AGACGTTGGCGAAAA CGCGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGCC CCGGAGTCGGTATGC TERM 1022 853590 - 853555 - G 100 -16.9 -3.04715 | overlap 853554 GACGTTGGCGAAAAC GCGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGC CCCGGAGTCGGTATG TERM 1023 854354 - 854336 - R 100 -11.7 -4.43173 | AAAAAGAAGGGAAAA CCGGAGC GCACG GCTCCGG TAGAGAGGTCAGCTG SSON_0804 855178 - 854363 - | hypothetical protein TERM 1024 855319 - 855289 - R 73 -11 -2.74012 | opp_overlap 855277 TGATGATGTGAATGA TTTAGCCCGGCGAC GAC GCCGCCGGGCCGAG GAGATTACAGCATAT ybiW 857756 - 855324 - | putative formate acetyltransferase TERM 1025 855611 - 855623 + g 71 -9.1 -3.55444 | opp_overlap 855609 CGCCGCCGAGAATCG CTGCC GTA GGCAG TTTACCCACTGAGCC TERM 1026 857307 - 857321 + g 71 -2.8 -4.77438 | CGCTTTAATGATTCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT ybiY 858688 - 857762 - | putative pyruvate formate-lyase 2 activating enzyme TERM 1027 858027 - 858040 + g 79 -3.7 -5.11033 | overlap 858024 ATAATGATTTTTTTG CCCGC TGCG GCGAG TTTTTTCAGGTTATC mipB 858792 - 859454 + | fructose-6-phosphate aldolase TERM 1028 859560 - 859600 + T 77 -10.3 -3.37474 | opp_overlap 859553 859554 859586 859587, overlap 859561 859591 CCAGATAAGGCGTTC ACGCCGCATCTGGCGTCTG GAG CAAATGCCTGATGCGACGC TTGTCGCGTCTTATC TERM 1029 859561 - 859599 + T 83 -13.8 -2.62003 | opp_overlap 859553 859554 859586 859587, overlap 859560 859591 CAGATAAGGCGTTCA CGCCGCATCTGGCGTCTG GAG CAAATGCCTGATGCGACG CTTGTCGCGTCTTAT TERM 1030 859620 - 859586 - T 72 -8.5 -3.72576 | opp_overlap 859561 859560 859591, overlap 859554 859587 GGCGTCTGGAGCAAA TGCCTGATGCGACGC TTGTC GCGTCTTATCAGGCC TGGAGGTGGCAATTA TERM 1031 859619 - 859587 - T 77 -12 -2.83403 | opp_overlap 859561 859560 859591, overlap 859554 859586 GCGTCTGGAGCAAAT GCCTGATGCGACGC TTGTC GCGTCTTATCAGGC CTGGAGGTGGCAATT TERM 1032 859591 - 859610 + T 73 -10 -3.30124 | opp_overlap 859554 859587 859586, overlap 859561 859560 CTGGAGCAAATGCCT GATGCGAC GCTT GTCGCGTC TTATCAGGCCTGGAG moeB 860382 - 859633 - | molybdopterin biosynthesis protein MoeB moeA 861617 - 860382 - | molybdopterin biosynthesis protein MoeA TERM 1033 860726 - 860714 - G 78 -10.5 -3.53444 | TCAGCGTCGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 1034 860920 - 860910 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGGGGATCGT TERM 1035 861084 - 861074 - G 87 -4.6 -5.252 | CACCGGTAGAAAAAA GCGC TAC ACGC ACTTTACGAATCACC TERM 1036 861526 - 861514 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG TAC CAGTG GCAGCGTTTCCTGGG TERM 1037 862485 - 862499 + G 70 -5.6 -4.38927 | opp_overlap 862486, overlap 862486 GATGCTACGCCAATA ACGCCA GTG TGGCGG TTTCTTGTATCGGCA TERM 1038 862498 - 862486 - g 73 -9.1 -3.65224 | opp_overlap 862486 862485 ATGCTACGCCAATAA CGCCA GTG TGGCG GTTTCTTGTATCGGC ybiK 861821 - 862786 + | L-asparaginase TERM 1039 863066 - 863094 + G 75 -11.7 -2.84325 | opp_overlap 863053 863044 863065 863066, overlap 863062 GAGCGCTGCACAAAT GCGCCATGTTCGC GGT GCGGATATGGCGA TGATATTTCAGGAGC TERM 1040 863301 - 863277 - g 77 -11.4 -3.15544 | opp_overlap 863273 863291 CGTTATCCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG SSON_0811 862806 - 864644 + | glutathione transporter ATP-binding protein TERM 1041 866132 - 866116 - g 71 -3 -4.82901 | gap 1, overlap 866118 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG SSON_0812 864664 - 866202 + | putative transport protein TERM 1042 867045 - 867057 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT SSON_0813 866220 - 867140 + | putative transport system permease protein SSON_0814 867143 - 868054 + | putative transport system permease protein TERM 1043 868194 - 868165 - f 78 -6.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACTATTT TTGCAGCGGC ACAGCGTTCAGATAG SSON_0816 869051 - 869554 + | IS1 ORF TERM 1044 870210 - 870185 - T 71 -9.6 -3.2614 | opp_overlap 870184, overlap 870187 870188 GATCGTTGATATTAA CACCCGCGCC ATTCTG GGCGCGGAGG CGTTGTGCCGTTGGG TERM 1045 870208 - 870187 - T 74 -10.8 -3.19602 | opp_overlap 870184, overlap 870185 870188 TCGTTGATATTAACA CCCGCGCC ATTCTG GGCGCGGA GGCGTTGTGCCGTTG TERM 1046 870207 - 870188 - T 76 -12.1 -2.51547 | opp_overlap 870184, overlap 870187 870185 CGTTGATATTAACAC CCGCGCC ATTCTG GGCGCGG AGGCGTTGTGCCGTT TERM 1047 870471 - 870458 - T 70 -2.3 -4.95484 | CATCATGAAAGAAAA TGGCC TGAA GGCGA ACAGCCTCTGTGTTG TERM 1048 870911 - 870922 + T 76 -4.4 -4.95806 | overlap 870920 AGTTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT TERM 1049 871400 - 871381 - T 73 -7.8 -4.11216 | opp_overlap 871395 871397 871399 TCTTTACTGTCAAAA TCGCTGGC GATG GACAGCGA GAACCTGATGTTCTC TERM 1050 871984 - 871966 - T 70 -5.3 -4.41177 | gap 1, opp_overlap 871974, overlap 871959 871970 TAGATAAAGGTAAAA TCTACCGC TTCG GCGGT-GA CGAATTTGCGGTGAT yliG 873573 - 872248 - | hypothetical protein TERM 1051 873553 - 873541 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 873786 - 874169 + | biofilm formation regulatory protein BssR TERM 1052 874165 - 874209 + F 76 -5 -4.84359 | opp_overlap 874173 874177, overlap 874173 874174 874177 CCATGCTTGAGAAGG CCTGAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 1053 874201 - 874173 - f 83 -9.6 -4.12198 | opp_overlap 874165 874173 874174 874177, overlap 874177 GAGAAGGCCTGAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1054 874174 - 874201 + F 72 -9.3 -3.59063 | gap 1, opp_overlap 874173 874177, overlap 874173 874165 874177 AGAAGGCCTGAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1055 874197 - 874177 - f 93 -12.6 -3.67175 | opp_overlap 874174 874173 874165 874177, overlap 874173 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1056 874177 - 874197 + F 88 -12.6 -3.48703 | opp_overlap 874177 874173, overlap 874174 874173 874165 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1057 874745 - 874757 + G 77 -2.7 -5.16841 | CGGCTGGTATTCGAC GGTAA AGG TTATC TTTTTATTGCTCTGG yliI 874280 - 875395 + | putative dehydrogenase yliJ 875970 - 875392 - | putative transferase TERM 1058 876296 - 876311 + H 84 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT SSON_0823 876440 - 876742 + | IS600 ORF1 SSON_0824 876883 - 877596 + | IS600 ORF2 TERM 1059 878770 - 878746 - T 82 -12.1 -3.30159 | opp_overlap 878746 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT TERM 1060 878746 - 878770 + T 90 -13.6 -3.39862 | opp_overlap 878746 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT deoR 879539 - 878781 - | DNA-binding transcriptional repressor DeoR TERM 1061 879291 - 879302 + g 79 -3.6 -5.06414 | overlap 879293 TGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG ybjG 880193 - 879597 - | undecaprenyl pyrophosphate phosphatase TERM 1062 879975 - 879965 - G 72 -5.4 -4.56597 | overlap 879967 GGTCGTGCGGAAAAA GATG TCC CATC GTCCAGGACACAAAC TERM 1063 881737 - 881711 - R 100 -8.7 -5.47399 | opp_overlap 881711 CGAAGGGTAAAAAAA TGCCTGACTGC TTTGT GCGATCAGGCA TTCTCGAATTAATGG ybjH 882030 - 881746 - | hypothetical protein SSON_0829 882904 - 882116 - | hypothetical protein SSON_0830 884139 - 882931 - | putative DEOR-type transcriptional regulator TERM 1064 883719 - 883706 - G 71 -3.1 -4.85599 | gap 1 CCTAGGCTATAAAAA CCG-TG CAT CATCGG CAAAACCGTTTTATT SSON_0831 884223 - 884759 + | putative DEOR-type transcriptional regulator TERM 1065 884821 - 884785 - T 85 -3.7 -5.60689 | TTAGATAACAAAAAA CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG CTCCACAAAATGGGG TERM 1066 884880 - 884850 - T 74 -3.3 -4.97158 | gap 1, opp_overlap 884877 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG SSON_0832 886619 - 884934 - | hypothetical protein TERM 1067 885518 - 885504 - G 83 -10 -4.09108 | opp_overlap 885503 885502 885500 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACGCG TERM 1068 885784 - 885823 + g 72 -7.8 -3.85817 | GGATCGAGTCGGGCA TGGGCGTCGGGATAGCCT ACCA ACGCTATTTCATCGCCCA TTTGTAGCACGGCAT ybjM 886889 - 887266 + | hypothetical protein TERM 1069 887292 - 887260 - T 90 -6.9 -5.40625 | opp_overlap 887268, overlap 887268 ACAGCACAGAAAAAA TCAGTAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 1070 887284 - 887268 - T 80 -10.1 -3.98747 | opp_overlap 887268, overlap 887260 GAAAAAATCAGTAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG TERM 1071 887296 - 887308 + T 71 -3.3 -4.87133 | opp_overlap 887296 GGGCTTGTCAGACGA TCAGG CGT CCAGA TTTTCTTTCACCCAT grxA 887553 - 887296 - | glutaredoxin 1 ybjC 887713 - 888000 + | hypothetical protein mdaA 887984 - 888706 + | nitroreductase A TERM 1072 889229 - 889286 + G 95 -14.2 -3.40522 | gap 1, opp_overlap 889251, overlap 889231 889232 889251 GGCGTCGTGCTGGCG GAGACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCATA TTCTGGTGCAGGAAT TERM 1073 889231 - 889284 + G 100 -16.8 -3.27475 | gap 1, opp_overlap 889251, overlap 889229 889232 889251 CGTCGTGCTGGCGGA GACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 1074 889232 - 889283 + G 100 -20.3 -2.56271 | gap 1, opp_overlap 889251, overlap 889231 889229 889251 GTCGTGCTGGCGGAG ACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 888767 - 889669 + | ribosomal protein S6 modification protein ybjN 889757 - 890233 + | putative sensory transduction regulator TERM 1075 890241 - 890283 + F 77 -12 -2.77401 | opp_overlap 890238, overlap 890241 TCCACTGATAACTCC TTTCGAGCACGCAGTCGCTG GTG CAGTGGCTGCGCGCTGCAAA ATTATCTGCTGTTTT TERM 1076 890241 - 890284 + F 86 -11.8 -3.65046 | gap 1, opp_overlap 890238, overlap 890241 TCCACTGATAACTCC TTTCG-AGCACGCAGTCGCTG GTG CAGTGGCTGCGCGCTGCAAAA TTATCTGCTGTTTTT TERM 1077 890526 - 890508 - f 75 -3.2 -5.24129 | opp_overlap 890508 CCCGCCGATAAAAAA TATGCA CGTTTAT TGCATA TCTTTTAGTGTGACA TERM 1078 891553 - 891541 - g 72 -6.9 -4.20918 | GCCAACGCCAATAAA GCAGC CAC GCCGC TGGTGAGTGCGGAAG potF 890584 - 891696 + | putrescine ABC transporter periplasmic substrate-binding protein TERM 1079 892358 - 892339 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 891791 - 892924 + | putrescine transporter ATP-binding subunit potH 892934 - 893887 + | putrescine ABC transporter membrane protein TERM 1080 894210 - 894237 + G 82 -12 -3.45032 | overlap 894205 894203 TATGATCACCGCGCC GCTGGTGATGCC AGAT GGCATCACGGGC TTGTCGCTGTTGTTA TERM 1081 894425 - 894435 + G 71 -3.2 -4.81083 | ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTCGTCATTACG potI 893884 - 894729 + | putrescine ABC transporter membrane protein TERM 1082 894759 - 894783 + F 95 -12.2 -4.25104 | opp_overlap 894762, overlap 894762 GCCAACCTGGCTACA TAATGCCGCG CATGC CGCGGCATTG TTTTCATGGAAGACG TERM 1083 894780 - 894762 - f 86 -11.7 -3.48772 | opp_overlap 894759 894762 AACCTGGCTACATAA TGCCGCG CATGC CGCGGCA TTGTTTTCATGGAAG TERM 1084 894762 - 894780 + F 95 -11.7 -4.25256 | opp_overlap 894762, overlap 894759 AACCTGGCTACATAA TGCCGCG CATGC CGCGGCA TTGTTTTCATGGAAG ybjO 894789 - 895277 + | hypothetical protein rumB 895318 - 896445 + | 23S rRNA methyluridine methyltransferase TERM 1085 896463 - 896450 - T 100 -9.5 -5.5604 | TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTCAGATTGCTGATC artJ 897351 - 896620 - | arginine 3rd transport system periplasmic binding protein TERM 1086 896969 - 896993 + g 77 -7.2 -4.46757 | opp_overlap 896969 TTTTCCATCCCAATA CGTTTGCC TTTCAGATC GGCAAACG TTTTGTAGGTATCTT TERM 1087 897475 - 897501 + r 85 -12.4 -3.4489 | opp_overlap 897475 ATGAAATAAAAAAAA GACGGATAACTT AGT GAGTTGTCCGTC TTCATTATAAGAATT TERM 1088 897501 - 897475 - R 100 -9.5 -6.25578 | opp_overlap 897475 ATGAAATAAAAAAAA GACGGATAACT TAGTG AGTTGTCCGTC TTCATTATAAGAATT artM 898312 - 897644 - | arginine transporter permease subunit ArtM artQ 899028 - 898312 - | arginine transporter permease subunit ArtQ TERM 1089 898984 - 898974 - G 74 -8.2 -3.99898 | opp_overlap 898980, overlap 898975 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 899766 - 899035 - | arginine 3rd transport system periplasmic binding protein artP 900512 - 899784 - | arginine transporter ATP-binding subunit TERM 1090 900699 - 900671 - R 77 -9 -3.96148 | gap 1, opp_overlap 900670 900671 GTCGGCGAGCATAAA TGT-CGGCATTCC TCAC GAAATGCCGGACA ATTTACGGGGTTTAT ybjP 901245 - 900730 - | putative lipoprotein TERM 1091 901010 - 901035 + g 72 -7.5 -3.92373 | TGACTATTATCGCGG CTGGCATCGCT AAGA AGGGTTGCCAG TTTGTCACTCAAATA TERM 1092 902707 - 902692 - g 74 -3.2 -4.88405 | opp_overlap 902692 AATTTTGAAACAAAA CCTGTT CATT ATCAGG ATTTATTAACACGAT SSON_0851 901894 - 903663 + | hypothetical protein SSON_0852 903874 - 904197 + | hypothetical protein SSON_0853 904194 - 905024 + | putative regulator SSON_0854 906070 - 905021 - | putative nucleotide di-P-sugar epimerase or dehydratase TERM 1093 905157 - 905185 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGACGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 907563 - 906133 - | putative dTDP-glucose enzyme TERM 1094 906343 - 906354 + g 72 -4.4 -4.66833 | opp_overlap 906343 TTTCATGCCAAATAA CAAC GTAA GTTG TTTTTCCGGTTCAAC TERM 1095 906650 - 906663 + g 73 -3.8 -4.81734 | TCGTAGCCCCAGTCG CTGG AGTTGA CCAG TTTTTCCTCCTCTTT ybjU 908575 - 907574 - | L-threonine aldolase poxB 910330 - 908612 - | pyruvate dehydrogenase TERM 1096 910453 - 910428 - R 82 -11.9 -3.38581 | overlap 910426 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATAAGGCGATTATGC SSON_0858 911431 - 910463 - | HCP oxidoreductase, NADH-dependent TERM 1097 911069 - 911057 - G 70 -10.5 -2.71119 | overlap 911039 911056 ACGCATCGACATAAT CGGCG TGA CGCCG CAGCCTGCCGCCAGC ybjW 913095 - 911443 - | hydroxylamine reductase TERM 1098 913269 - 913254 - R 72 -3.2 -4.99035 | overlap 913256 TTACGCAGAGAAAAA GGCGAT GAGG ATCGGC ACTAACAGGCTAAGA ybjE 914186 - 913239 - | putative surface protein TERM 1099 914474 - 914513 + H 100 -17.8 -2.71364 | TTCGCCAGAGCCCGG GGGGGCAGGGGGCGGC GGCGATTG GCCGCCCCCTGCGCGC TCCTTGCGCCAGTGG TERM 1100 914621 - 914601 - H 100 -11.1 -5.46629 | opp_overlap 914601 AACATCTTAAAAAAA GGCCTGACA TTA CGCCAGGCC TTCTGCGTTAATTAA SSON_0862 915182 - 915685 + | IS1 ORF ybjD 915971 - 917629 + | hypothetical protein TERM 1101 917651 - 917700 + T 85 -6.6 -5.14965 | gap 3, overlap 917653 917654 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT ybjX 918618 - 917626 - | putative enzyme TERM 1102 917654 - 917698 + g 73 -11.6 -2.80472 | gap 2, overlap 917653 917651 ATCGTGGCCATTTGT GGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC CGTTTTTTACTGGCG TERM 1103 918459 - 918448 - G 71 -3 -4.7373 | CGAGCGCAGCAAAAA TTTC TGGC GAAA ACTACGGCGATGCCA SSON_0865 918733 - 919848 + | macrolide transporter subunit MacA TERM 1104 920073 - 920111 + G 72 -4.6 -4.65263 | gap 3, overlap 920078 GTTGCCACGCTGGAC GCCG--ATGCGC-TGGCGC AACT GCGCCGCGAGCATTTCGGC TTTATTTTCCAGCGT TERM 1105 920880 - 920868 - g 75 -5.5 -4.66163 | overlap 920871 ATCGCCATCCAAAAA CAACC GTG GGTCG CCTCAGCCACACCTG TERM 1106 921112 - 921144 + G 85 -13.5 -3.25823 | ATGTGGTTGGCGAGG TGATTCTGGTCGGCA ATA TGCCCGCCAGAGTCA TTGGTGTGGCGGAAG ybjZ 919845 - 921791 + | macrolide transporter ATP-binding /permease protein TERM 1107 921827 - 921807 - T 100 -12.6 -4.96848 | opp_overlap 921807 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT TERM 1108 921807 - 921827 + T 95 -12.6 -4.35926 | opp_overlap 921807 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT cspD 922088 - 921864 - | stationary phase/starvation inducible regulatory protein CspD TERM 1109 922580 - 922564 - g 85 -2.9 -5.38249 | overlap 922557 922579 ACCAACCACAAAAAA CGCCTTT TTT AATGACG GTGGCAATCTTAGCG TERM 1110 922741 - 922727 - g 75 -5.6 -4.67353 | overlap 922729 GCAGCCAGGGAAAAA GCGGCA CAG TGTCGC GCCTGGCTGGCTGAG SSON_0868 922493 - 923731 + | putative integrase TERM 1111 923808 - 923774 - f 79 -8.9 -4.08064 | gap 1, opp_overlap 923774 923778, overlap 923778 AATGGCCCTCTAAAA TAAATCGTCGAATATC GGCA AATAT-CGACGATTTA TATGTGTCAACTATC TERM 1112 923804 - 923778 - f 72 -5.3 -4.64861 | gap 1, opp_overlap 923778 923774, overlap 923774 GCCCTCTAAAATAAA TCGTCGAATATC GGCA AATAT-CGACGA TTTATATGTGTCAAC SSON_0869 924285 - 924788 + | IS1 ORF TERM 1113 924797 - 924815 + F 74 -3.8 -4.98531 | TCAATAAGTTGGAGT CATTACCA GCA TGGTTGTG TTTTTAATTTAAGAG TERM 1114 925174 - 925155 - g 100 -10.7 -4.85653 | opp_overlap 925154 925161 GACACATAAAACAAA GGCGACC TGGGGC GGTCGCC AGTTTGGAAACACTA TERM 1115 925876 - 925846 - g 72 -8.4 -3.74198 | overlap 925866 AAAAAAGACTTGAAA TGGTATTCACCTAA ATG TAATGTGAATACCA CAAGTGCTGATACAT TERM 1116 925951 - 925913 - g 82 -13.2 -2.98034 | opp_overlap 925917, overlap 925910 925917 CAGCAATTGAAACGA CGAAGCCCCGCAAGTG TCGTTAC CACTCGCAGGGCTTCT AACCAACAACGTAAA TERM 1117 925947 - 925917 - g 83 -12.6 -3.33885 | opp_overlap 925917, overlap 925913 925910 AATTGAAACGACGAA GCCCCGCAAGTG TCGTTAC CACTCGCAGGGC TTCTAACCAACAACG SSON_0870 925138 - 925953 + | hypothetical protein TERM 1118 926690 - 926703 + G 71 -9.5 -3.54424 | TATTAGCAGATTCAG GCGGG AAAT CCCGC TTTCCAGAAATAACC SSON_0871 926496 - 926795 + | hypothetical protein TERM 1119 927195 - 927181 - g 86 -4.2 -5.45802 | GGCGGAAAAGAAAAA GGTAGT TGA ACTGCC TGTAAAGAAAAAAGA SSON_0872 926792 - 928279 + | bacteriophage P4 DNA primase TERM 1120 928300 - 928330 + F 72 -9 -3.53444 | overlap 928304 TTCGCTGGTGGACTT CTGCGGCTATCTCA TGT TGAGGTAGCCTGAG TTTAACGGACACTCC TERM 1121 928304 - 928326 + F 78 -12.8 -2.64155 | overlap 928300 CTGGTGGACTTCTGC GGCTATCTCA TGT TGAGGTAGCC TGAGTTTAACGGACA SSON_0873 928381 - 928683 + | IS600 ORF1 SSON_0874 928824 - 929537 + | IS600 ORF2 SSON_0875 930165 - 930410 + | hypothetical protein TERM 1122 930757 - 930740 - g 79 -4.7 -5.00616 | CCGGGCGGTAAAAAA GGCCAAC AGGG GCAGGCC ACTGATGCACTGAAC SSON_0876 930407 - 930829 + | putative single stranded DNA-binding protein TERM 1123 930861 - 930846 - f 79 -10.4 -3.5361 | opp_overlap 930846 CAACGAGTGACAGAA GCCGGA GCAA TCCGGC TTTTTTGTAGGTACT TERM 1124 930846 - 930861 + F 100 -10.4 -5.28778 | opp_overlap 930846 CAACGAGTGACAGAA GCCGGA GCAA TCCGGC TTTTTTGTAGGTACT TERM 1125 931074 - 931100 + F 80 -10.1 -3.85698 | gap 1, opp_overlap 931074 CAGGCGCAAAAAAAA GCGCC-CCGATG GTGC CACCGGAGGCGC TTTGTCAGCGACAAA TERM 1126 931100 - 931074 - f 100 -12.3 -5.76949 | gap 1, opp_overlap 931074 CAGGCGCAAAAAAAA GCGCC-CCGATG GTGC CACCGGAGGCGC TTTGTCAGCGACAAA TERM 1127 931345 - 931332 - f 75 -6.7 -4.46581 | GAAAACCGGATAAAA GTGCA ACAG TGCAC ATAGACGCCGGAACT SSON_0877 931489 - 932634 + | putative protease/scaffold protein SSON_0878 932598 - 933356 + | unknown protein encoded within prophage TERM 1128 933363 - 933378 + F 100 -11.8 -5.03715 | opp_overlap 933363 TCTTCATGAGAACAA GGCGGC AGCA GCCGCC TTTTTTGCGGGTCCT TERM 1129 933378 - 933363 - f 95 -11.8 -3.84406 | opp_overlap 933363 TCTTCATGAGAACAA GGCGGC AGCA GCCGCC TTTTTTGCGGGTCCT SSON_0879 933615 - 933860 + | hypothetical protein TERM 1130 934789 - 934769 - g 77 -9.7 -3.59979 | overlap 934773 934783 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 1131 934785 - 934773 - g 75 -6.9 -4.44046 | overlap 934769 934783 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_0880 933947 - 935119 + | IS21 ORF1 SSON_0881 935119 - 935916 + | IS21 ORF2 TERM 1132 936222 - 936252 + F 100 -14.1 -3.79906 | gap 1, opp_overlap 936205, overlap 936225 GTTTCTCATATGTGA GT-ACCGAGGGCGG AATT CCGCCTTCGGTTAC TTATTGTGCGCATGC TERM 1133 936225 - 936248 + F 100 -16 -3.58208 | opp_overlap 936205, overlap 936222 TCTCATATGTGAGTA CCGAGGGCGG AATT CCGCCTTCGG TTACTTATTGTGCGC TERM 1134 936556 - 936545 - f 80 -5.8 -4.96773 | TCAATGAAAAATAAA GGCT AATA AGCC AAATGCTATAAATGA TERM 1135 936782 - 936792 + G 77 -6.8 -4.45738 | opp_overlap 936782 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG clpS 936670 - 936990 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1136 936998 - 936985 - f 88 -8.1 -4.85599 | TGTACGCTAGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1137 937693 - 937682 - g 70 -7.2 -4.07568 | CTGGTGTCGGTAAAA CCGC GATT GCGG AAGGTCTTGCCTGGC TERM 1138 939203 - 939163 - g 90 -6.8 -5.11033 | opp_overlap 939165 GACAACCTGAAAAAA CCGCTCGCCAACGAAC TGCTGTTTG GTTCGCTGGTGGACGG CGGTCAGGTCACCGT clpA 937021 - 939297 + | ATP-dependent Clp protease ATP-binding subunit TERM 1139 939323 - 939350 + T 100 -15 -5.38054 | AGGTAGGTTGGTGAA GTCCGTAATCTC GAAA GAGGTTACGGAC TTTTTGTTTATGGGG TERM 1140 939689 - 939670 - T 100 -10 -5.82388 | opp_overlap 939668 939670 AAATGCGAAAAAAAA GCTCGCAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1141 940001 - 939985 - T 100 -10.1 -5.56263 | opp_overlap 939985 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT TERM 1142 939985 - 940001 + T 79 -7.9 -4.40037 | opp_overlap 939985 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT infA 940262 - 940044 - | translation initiation factor IF-1 aat 941251 - 940547 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1143 941128 - 941116 - G 81 -6.3 -4.7329 | overlap 941119 AAAACCACGGAAAAA TACCA CGC TGGTA AGCCATTAACAGGCG cydC 943014 - 941293 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 944781 - 943015 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1144 944057 - 944044 - G 74 -3.1 -4.91109 | GCCGGAGGATAAAAA TGCCA GCCG TAGCA CTTCCATTGTCCGTT TERM 1145 944878 - 944844 - R 74 -3.4 -5.06103 | opp_overlap 944845 944848, overlap 944848 944849 ACAACGGGGAAAAAA TAAAGGCGACCCATAG TCG CAAGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1146 944848 - 944874 + r 72 -6.4 -4.25231 | opp_overlap 944844 944848 944849, overlap 944845 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT TERM 1147 944874 - 944848 - R 83 -6.4 -5.04249 | opp_overlap 944848 944845, overlap 944844 944849 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT trxB 945869 - 944904 - | thioredoxin reductase TERM 1148 945732 - 945749 + g 81 -6.9 -4.66163 | overlap 945719 TTCCACTTCCGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT lrp 946414 - 946908 + | leucine-responsive transcriptional regulator TERM 1149 946962 - 946998 + F 79 -8.8 -4.13767 | gap 1, opp_overlap 946964 946968, overlap 946965 946968 TCCTGTTAATCCATA CAG-CAACAGTACTGGG GTAA CCTGGTACTGTTGTCCG TTTTAGCATCGGGCA TERM 1150 946965 - 946994 + F 83 -13.7 -2.75577 | opp_overlap 946964 946968, overlap 946962 946968 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG TERM 1151 946968 - 946991 + F 75 -9.6 -3.52113 | opp_overlap 946964 946968, overlap 946965 946962 TAATCCATACAGCAA CAGTACTGGG GTAA CCTGGTACTG TTGTCCGTTTTAGCA TERM 1152 948790 - 948753 - g 74 -3.2 -5.00616 | opp_overlap 948759 948764, overlap 948754 948755 948757 TCTGGCGTGAAAAAA GCGACACTGGCGACGG GGGCTG CCGCAACCGTTGCCGC GCCAGTCTTCAGTCT ftsK 947043 - 951110 + | DNA translocase FtsK lolA 951262 - 951876 + | outer-membrane lipoprotein carrier protein ycaJ 951887 - 953230 + | recombination factor protein RarA serS 953321 - 954613 + | seryl-tRNA synthetase TERM 1153 954652 - 954639 - f 100 -9.5 -4.74103 | opp_overlap 954639 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT TERM 1154 954639 - 954652 + F 100 -9.5 -5.72616 | opp_overlap 954639 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT dmsA 954939 - 957296 + | anaerobic dimethyl sulfoxide reductase subunit A dmsB 957307 - 957924 + | anaerobic dimethyl sulfoxide reductase subunit B dmsC 957926 - 958789 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1155 958795 - 958822 + T 83 -6.2 -5.04733 | opp_overlap 958800, overlap 958800 CGCAAGCTAATCAGT AACAACCGGGGT TTCG GCCCCGGTTCTC TTTTATTTCTGCTTC TERM 1156 958817 - 958800 - T 79 -9.8 -3.77722 | opp_overlap 958795 958800 GCTAATCAGTAACAA CCGGGG TTTCGG CCCCGG TTCTCTTTTATTTCT TERM 1157 958800 - 958817 + T 87 -10.5 -4.14927 | opp_overlap 958800, overlap 958795 GCTAATCAGTAACAA CCGGGGT TTCG GCCCCGG TTCTCTTTTATTTCT ycaC 959451 - 958825 - | hypothetical protein ycaD 959766 - 960914 + | MFS family transporter TERM 1158 960925 - 960956 + F 100 -13.2 -5.82036 | opp_overlap 960925 960920 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1159 960956 - 960925 - f 83 -13.2 -3.26596 | opp_overlap 960925, overlap 960920 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1160 961222 - 961244 + F 79 -4 -5.17353 | opp_overlap 961222, overlap 961222 961225 961228 CGTTGTTAATAACTA CGCCAACCAG GGG CTGGTGGTTG TTTTTTCATGGGTGT TERM 1161 961225 - 961241 + F 78 -6.5 -4.67552 | opp_overlap 961222, overlap 961222 961222 961228 TGTTAATAACTACGC CAACCAG GGG CTGGTGG TTGTTTTTTCATGGG TERM 1162 962196 - 962210 + F 71 -10 -3.24747 | CGATTCTGATTATGC TGCCGA CTC TCGGCA TTGGTGATATGAACA SSON_0901 963055 - 963558 + | IS1 ORF TERM 1163 964596 - 964573 - T 100 -13.2 -5.4505 | opp_overlap 964573 GTGCGGAATAAAAAA GCGGCAACTC AATA AAGTTGCCGC TTTACGGGGAAATTA TERM 1164 964573 - 964596 + T 88 -12.5 -3.53761 | opp_overlap 964573 GTGCGGAATAAAAAA GCGGCAACT CAATAA AGTTGCCGC TTTACGGGGAAATTA pflA 965349 - 964609 - | pyruvate formate lyase-activating enzyme 1 TERM 1165 965044 - 965027 - G 71 -2.7 -4.75219 | gap 1 TAACGACGAACAAAA CCGT-TGG TGT CCAGACAG GTATGAATGCCTTCT TERM 1166 965172 - 965155 - G 72 -7.7 -3.87869 | opp_overlap 965155 GGAAGCGTTCATAAA GTGGCGA TAGG TCACCAC CTCTTTCATTAAATC TERM 1167 965466 - 965510 + r 82 -7.2 -4.80882 | gap 1, opp_overlap 965479, overlap 965467 965479 TGACAAAAAAGGCTC TCGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACGC TTTTTACTGTACGAT TERM 1168 965467 - 965509 + r 79 -10.7 -3.47806 | gap 1, opp_overlap 965479, overlap 965466 965479 GACAAAAAAGGCTCT CGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACG CTTTTTACTGTACGA TERM 1169 965498 - 965479 - R 100 -11.4 -5.00616 | opp_overlap 965467 965466 965479 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT TERM 1170 965479 - 965498 + r 83 -9.2 -4.33851 | opp_overlap 965479, overlap 965467 965466 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT pflB 967823 - 965541 - | formate acetyltransferase 1 TERM 1171 967869 - 967890 + r 76 -8.7 -4.08216 | ATTTACTGCGTACTT CGACAACCA TTAA TGGTGGTCG TTTTCACGCAGGTAA focA 968735 - 967878 - | formate transporter TERM 1172 969089 - 969067 - R 74 -11.3 -2.86654 | opp_overlap 969067, overlap 969066 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC TERM 1173 969108 - 969138 + r 70 -2.5 -5.07652 | opp_overlap 969108 969115, overlap 969113 969115 TATAACTCAGACTAA TCATTAAGCCTAC ATTGC GTAGGCTATTTGA TTTTATTTTGCCCAG TERM 1174 969113 - 969133 + r 72 -5.4 -4.41486 | opp_overlap 969108 969115, overlap 969108 969115 CTCAGACTAATCATT AAGCCTAC ATTGC GTAGGCTA TTTGATTTTATTTTG ycaO 970910 - 969141 - | hypothetical protein TERM 1175 969487 - 969497 + g 75 -6.8 -4.41047 | overlap 969482 TCGCCACCAGCCAGC GCCA GCA TGGC TTTTAATTCACCGAT TERM 1176 971057 - 971074 + G 77 -6.3 -4.62054 | CGATCTCCACCGTAT GGCATTT GATA AAGTGCC TTTTGATTTCCTTGG ycaP 971031 - 971723 + | hypothetical protein TERM 1177 972539 - 972518 - g 71 -3 -4.82901 | gap 1, opp_overlap 972535, overlap 972520 TGGCGCGCAGAAAAA TATC-GGCC CGGCT GGCCTGACA ATCGTCATCGTTCGT serC 971922 - 973010 + | phosphoserine aminotransferase TERM 1178 973030 - 973050 + F 100 -12.6 -5.4659 | GAAATTTTGCTTAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG aroA 973081 - 974364 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1179 974500 - 974475 - f 72 -9.1 -3.61398 | opp_overlap 974475 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 1180 974475 - 974500 + F 100 -9.8 -5.61596 | opp_overlap 974475 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_0910 974490 - 975836 + | IS4 orf TERM 1181 975847 - 975818 - f 89 -9.3 -4.59109 | overlap 975820 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACGGCACATTGTCG TERM 1182 975845 - 975820 - f 100 -16.3 -3.90762 | overlap 975818 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACGGCACATTGT ycaL 975948 - 976736 + | putative heat shock protein TERM 1183 976852 - 976872 + F 76 -8.9 -3.66784 | opp_overlap 976865, overlap 976865 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC TERM 1184 977228 - 977265 + G 81 -10.5 -3.57561 | opp_overlap 977194 977206, overlap 977217 977206 AAGTCGCGGCATTCC CACGCGTTCGTGAAGCA TTAT TGCGTCGCCAACGCGCG TTTCGCGAATTACCA TERM 1185 977461 - 977449 - g 70 -6.9 -4.04806 | GCCGAGATCAAAGAA CGCGA CGA CCGCG ATCGTAACCGAGCGG TERM 1186 977569 - 977554 - g 70 -4 -4.68424 | gap 1, overlap 977563 977565 CAAGTGATTGAAAAA GCGC-TA CAA TACGCGC GCCAGAAATTGGCTC cmk 976909 - 977592 + | cytidylate kinase TERM 1187 977877 - 977867 - g 88 -8.2 -4.63527 | overlap 977868 977869 TGAGCAGTTCAAAAA CGCC CAG GGCG AGCTGGAAATCCAGG rpsA 977703 - 979376 + | 30S ribosomal protein S1 TERM 1188 979387 - 979408 + F 87 -9.5 -4.29929 | overlap 979381 AGTAATTCTCTGACT CTTCGGGAT TTTT ATTCCGAAG TTTGTTGAGTTTACT TERM 1189 979485 - 979455 - f 85 -12.7 -3.33696 | gap 1, opp_overlap 979462, overlap 979458 979462 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAGCAACAGCA TERM 1190 979483 - 979458 - f 93 -15.5 -2.84098 | opp_overlap 979462, overlap 979455 979462 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAGCAACAG TERM 1191 979462 - 979479 + F 86 -14.1 -3.18264 | opp_overlap 979458 979455 979462 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA TERM 1192 979479 - 979462 - f 90 -14.1 -3.30554 | opp_overlap 979462, overlap 979458 979455 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA ihfB 979536 - 979820 + | integration host factor subunit beta TERM 1193 979842 - 979872 + F 83 -9.8 -4.08706 | opp_overlap 979850, overlap 979843 979850 ACTCAAACTTGAACG CGAGAAAAGCACCT GTC GGGTGCTTTTTTCA TTTCTCTAATCAGGA TERM 1194 979843 - 979871 + F 82 -13.3 -3.04902 | opp_overlap 979850, overlap 979842 979850 CTCAAACTTGAACGC GAGAAAAGCACCT GTC GGGTGCTTTTTTC ATTTCTCTAATCAGG TERM 1195 979864 - 979850 - f 77 -7.1 -4.42788 | opp_overlap 979850 979843 979842 TTGAACGCGAGAAAA GCACC TGTCG GGTGC TTTTTTCATTTCTCT TERM 1196 979850 - 979864 + F 95 -7.8 -5.4387 | opp_overlap 979850, overlap 979843 979842 TTGAACGCGAGAAAA GCACCT GTC GGGTGC TTTTTTCATTTCTCT TERM 1197 981012 - 981038 + G 84 -3.6 -5.22312 | overlap 981015 981016 981033 CGCAAAGTTTATGGC TCTCTGCCGC TGCGGTC GCGGCACTGA TTTTTTGGTATCAGT ycaI 980027 - 982291 + | hypothetical protein TERM 1198 983170 - 983183 + G 77 -6.7 -4.44211 | GGATAACCTGACTGC CGGTA CGAT TACCG TTGTTTTCTCTTCAA msbA 982328 - 984076 + | lipid transporter ATP-binding/permease protein TERM 1199 984108 - 984127 + G 75 -11.4 -2.88677 | overlap 984110 TGGTGAATCCCCTTT GTGGCGGC TATT GCTGCCAC TCTCCTGGTTGTATG TERM 1200 984208 - 984184 - g 75 -5.5 -4.61873 | overlap 984189 TGCTATAAACTAAAA CTGAAGCGCGC CTG GCGTGCCCCCG TACCGGTTGTCGTGG TERM 1201 984479 - 984469 - g 70 -6.8 -4.09685 | TCTGATGCGGTAAAA GCCA TTC TGGC GCAACACCCTGATGT TERM 1202 984777 - 984801 + G 74 -2.9 -5.0133 | gap 2, overlap 984777 984778 ACATGTAGTGGCGAT G-GCGG-GGAT TGGGC ATCCGCCGCGC TTTTTTGCCACGCTG lpxK 984073 - 985059 + | tetraacyldisaccharide 4'-kinase TERM 1203 985994 - 986005 + G 74 -2.2 -5.10154 | gap 1, opp_overlap 985994 TCTGGGATCGCAAAC GC-GC AGA GCAGC TTTTTGATTTTAGCT TERM 1204 986054 - 986064 + G 70 -6.8 -4.00512 | opp_overlap 986053 986054 CCCCAGCGCCGAAAC GCCA GTA TGGC TATTTTGTTCTGCCA ycaQ 985096 - 986328 + | hypothetical protein ycaR 986380 - 986562 + | hypothetical protein kdsB 986559 - 987305 + | 3-deoxy-manno-octulosonate cytidylyltransferase SSON_0921 987459 - 988352 + | hypothetical protein ycbC 989108 - 988329 - | hypothetical protein TERM 1205 989790 - 989775 - g 100 -2.4 -5.93252 | overlap 989777 CCGAAAAAGAAAAAA CGGACG CTTT CGCCAG ATTATCCACGCGACC smtA 989244 - 990029 + | putative metallothionein SmtA TERM 1206 991166 - 991137 - g 70 -5.7 -4.36914 | gap 1, opp_overlap 991164 TTGCCGTGTACAAAA CCAGA-CAAGTGCC GCT GGATCTTGGTCTGG TGGTACGCGAATATC TERM 1207 991196 - 991221 + G 81 -10.5 -3.58505 | gap 1, opp_overlap 991192, overlap 991164 991192 CTGTCACAGTATCCG CGTGC-ACGTCA CTT TGACGTTGCGCG TATTGTTATTGATCA mukF 990026 - 991348 + | condesin subunit F TERM 1208 991400 - 991415 + G 70 -10.4 -3.17075 | GAATCCGTTATTTCC GGCGCT GGAC AGCGCC TTACGTTCAGGCCGC mukE 991356 - 992033 + | condesin subunit E TERM 1209 993268 - 993222 - g 70 -6.5 -4.15565 | gap 1, opp_overlap 993214, overlap 993226 TGGACGAGCTGAAAA GCCAGCTTGCT-GACTACCAGC AGGC GCTGGACGTCCAGCAAACGCGC GCGATCCAGTATAAC TERM 1210 993420 - 993405 - g 81 -4.7 -5.10497 | AAGCGACTGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC mukB 992033 - 996493 + | cell division protein MukB TERM 1211 996521 - 996496 - f 76 -7.5 -4.24948 | opp_overlap 996500, overlap 996500 TCAGGAGAGTTAAAA TTAAGGCGGCA GCAA TGCCGCCTTTT CTTTTTCCGAAAACT TERM 1212 996500 - 996517 + F 100 -12.7 -5.26119 | opp_overlap 996496 996500 GAGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1213 996517 - 996500 - f 93 -12.7 -3.70676 | opp_overlap 996500, overlap 996496 GAGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1214 996623 - 996648 + F 100 -9.8 -5.61596 | opp_overlap 996623 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 1215 996648 - 996623 - f 72 -9.1 -3.61398 | opp_overlap 996623 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_0927 996638 - 997984 + | IS4 orf TERM 1216 997995 - 997966 - f 89 -9.3 -4.59109 | overlap 997968 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACATTACGGCGC TERM 1217 997993 - 997968 - f 100 -16.3 -3.90762 | overlap 997966 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACATTACGGC ycbB 998192 - 1000039 + | hypothetical protein ycbK 1000220 - 1000768 + | hypothetical protein ycbL 1000795 - 1001442 + | hypothetical protein TERM 1218 1001474 - 1001456 - T 100 -10.2 -5.38951 | opp_overlap 1001455 AAGGCACATAAAAAA GCCCGCTT TTA ATGCGGGC CTGGATTTCTGGCAA TERM 1219 1001621 - 1001653 + T 71 -3.4 -4.81083 | gap 1, overlap 1001626 1001629 TGTTGCGTTTGTCAT CAGTCTCAGCCCGCT TTTC AGCGGGCTTC-ATTG TTTTTAATGCTTACA TERM 1220 1001626 - 1001650 + T 70 -5 -4.50218 | gap 1, overlap 1001621 1001629 CGTTTGTCATCAGTC TCA-GCCCGCT TTTC AGCGGGCTTCA TTGTTTTTAATGCTT TERM 1221 1001629 - 1001646 + T 93 -12.7 -3.75772 | overlap 1001626 1001621 TTGTCATCAGTCTCA GCCCGCT TTTC AGCGGGC TTCATTGTTTTTAAT aspC 1002854 - 1001664 - | aromatic amino acid aminotransferase TERM 1222 1002341 - 1002363 + g 70 -9.9 -3.18912 | ACAGCACTACGTCGC CAGCCTGAG CTTCA TTCAGGCTG TTAATCAGTGCATCG TERM 1223 1002992 - 1003007 + r 100 -9 -5.07107 | opp_overlap 1002992 AAGGTATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA TERM 1224 1003007 - 1002992 - R 100 -9 -5.97575 | opp_overlap 1002992 AAGGTATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA ompF 1004127 - 1003039 - | outer membrane protein F TERM 1225 1003559 - 1003579 + g 70 -4.7 -4.57569 | gap 1, opp_overlap 1003544 1003536 1003559, overlap 1003561 CCGTCGCCGTTAGAA CG-GCGTG CAGTGT CACGCTCG TTTTTACCCAGGTAC TERM 1226 1004579 - 1004553 - R 79 -2.2 -5.4833 | opp_overlap 1004554, overlap 1004554 1004557 1004558 TCAGCTAAGAAAAAA CTAATCCGCAAT AAG AATGCGGGTTAT TTTTTGTGCGTAAAT TERM 1227 1004554 - 1004578 + r 95 -7.9 -5.28176 | opp_overlap 1004553 1004554 1004557 1004558 CAGCTAAGAAAAAAC TAATCCGCAAT AAG AATGCGGGTTA TTTTTTGTGCGTAAA TERM 1228 1004695 - 1004714 + r 93 -13.6 -3.53091 | opp_overlap 1004695 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT TERM 1229 1004714 - 1004695 - R 100 -13.6 -5.43621 | opp_overlap 1004695 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT asnC 1006129 - 1004729 - | asparaginyl-tRNA synthetase TERM 1230 1006292 - 1006275 - R 100 -9.1 -5.58209 | opp_overlap 1006272 TTAAAGGTAAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG pncB 1007503 - 1006301 - | nicotinate phosphoribosyltransferase TERM 1231 1009810 - 1009800 - g 72 -6.8 -4.19472 | GAAGATATTGCAAAA CGCA CTC TGCG AAATGCCTGCCTGCG TERM 1232 1009905 - 1009917 + G 78 -9.1 -3.86822 | overlap 1009907 AACAATATGACCGAT GCGCT GGC AGCGC TTTCTGCGGCGGTTG TERM 1233 1010311 - 1010299 - g 70 -4.7 -4.47328 | overlap 1010300 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAACAGTTGAAAGG pepN 1007769 - 1010381 + | aminopeptidase N TERM 1234 1010432 - 1010398 - T 76 -8.5 -4.18197 | opp_overlap 1010406 1010408, overlap 1010399 ACTTTTGAGCCAAAA TGCCTGATGCGACGC TTGAC GCGTCTTATCAGGCC TACAACTCCGTTGAA TERM 1235 1010431 - 1010399 - T 78 -12 -3.10597 | opp_overlap 1010406 1010408, overlap 1010398 CTTTTGAGCCAAAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAACTCCGTTGA ssuB 1011355 - 1010588 - | aliphatic sulfonates transport ATP-binding subunit ssuC 1012143 - 1011352 - | alkanesulfonate transporter permease subunit ycbO 1014258 - 1013299 - | alkanesulfonate transporter substrate-binding subunit ycbP 1014826 - 1014251 - | NAD(P)H-dependent FMN reductase SSON_0941 1015398 - 1015901 + | IS1 ORF ycbQ 1015950 - 1016501 + | putative fimbrial-like protein TERM 1236 1016525 - 1016563 + F 70 -2.5 -5.03314 | gap 1, opp_overlap 1016530, overlap 1016527 1016531 1016532 1016533 ATTAATTGTTTTATT AATTAGTA-CCCCTCTAG TGTT CTGGAGGGGATATTCATA TTTTTTAAGAGTGAC TERM 1237 1016531 - 1016557 + F 72 -8.1 -3.66995 | gap 1, opp_overlap 1016530, overlap 1016527 1016525 1016532 1016533 TGTTTTATTAATTAG TA-CCCCTCTAG TGTT CTGGAGGGGATA TTCATATTTTTTAAG TERM 1238 1016532 - 1016555 + F 70 -8.8 -3.39574 | opp_overlap 1016530, overlap 1016531 1016527 1016525 1016533 GTTTTATTAATTAGT ACCCCTCTAG TGTT CTGGAGGGGA TATTCATATTTTTTA TERM 1239 1016533 - 1016554 + F 78 -12.3 -2.62118 | opp_overlap 1016530, overlap 1016532 1016531 1016527 1016525 TTTTATTAATTAGTA CCCCTCTAG TGTT CTGGAGGGG ATATTCATATTTTTT ycbR 1016584 - 1017285 + | putative chaperone TERM 1240 1018228 - 1018218 - f 72 -5.4 -4.47217 | opp_overlap 1018218 AACGATTAAGCAAAA TGGT TAC ACCA TTTACCAAACTTATG SSON_0945 1019900 - 1020970 + | FimH-like protein TERM 1241 1021222 - 1021255 + GF 70 -4.5 -4.56597 | gap 1, overlap 1021226 AATATCGATATCACC GGTTGTGC-CGCTAGT ATT ACTGGCGCGGACGTCC TTTTTAGCGGCGAGG SSON_0946 1020982 - 1021524 + | putative fimbrial-like protein TERM 1242 1021675 - 1021704 + GF 88 -2.1 -5.52384 | gap 1, overlap 1021676 TAGCAAGCAAATCAA TGTG-CAGTTAGGC GAT GTCTCGCTGACACG TTTTTTTCATGGGAA SSON_0947 1021484 - 1022047 + | putative fimbrial-like protein ycbF 1022013 - 1022750 + | hypotheical protein TERM 1243 1022759 - 1022773 + F 86 -2.8 -5.75342 | GCCCTGAAACAGGTT CGGAAA ACG TTTGCG TTTTTTTTGCCGCAG TERM 1244 1023473 - 1023460 - g 72 -5.3 -4.47707 | CGCGATTAAAAATAA GCAAA ATGA TTTGC AAGCGATGCACCATA TERM 1245 1023703 - 1023684 - g 70 -4.2 -4.65895 | overlap 1023688 CGCTTCAGTTAAAAA GCACCGAA ATTA TTCGCCGC TTGTCACTGGAATTA pyrD 1022861 - 1023871 + | dihydroorotate dehydrogenase 2 TERM 1246 1023893 - 1023936 + F 74 -10.6 -3.22448 | opp_overlap 1023903 1023904 1023906, overlap 1023900 1023904 CTTCGAATTCCTCTT TATAAGATAATCAGGGCT TTATTTTC AGCCCTGGTTGTTTTATA TTCATCGCTGTTGCT TERM 1247 1023900 - 1023929 + F 78 -6.5 -4.70583 | opp_overlap 1023903 1023904 1023906, overlap 1023893 1023904 TTCCTCTTTATAAGA TAATCAGGGCT TTATTTTC AGCCCTGGTTG TTTTATATTCATCGC TERM 1248 1024319 - 1024334 + G 71 -2.5 -4.88918 | ATCTCAAACCGCAAA TGCCG AAAAGC TGGCA TTTTGTTTCCCATGG ycbW 1024009 - 1024587 + | hypothetical protein SSON_0951 1025693 - 1024584 - | hypothetical protein TERM 1249 1025174 - 1025191 + g 75 -5.5 -4.62069 | opp_overlap 1025165 1025166 CGGAAACCACCAGAT TGGGGCG GAAT TGCTCCA TTTTTACACTGGCCG TERM 1250 1027419 - 1027403 - g 70 -3.7 -4.6902 | CCAGAAGGGCAAAAA CCAGT ACCAGAA ACTGG GCGAGAAGGGCGAGT ycbY 1025937 - 1028045 + | 23S rRNA m(2)G2445 methyltransferase TERM 1251 1029705 - 1029695 - g 74 -8.2 -3.88925 | AAAAAAACCGAAGAA GCCG CCG CGGC AAAAGCAGAAACTGT uup 1028057 - 1029964 + | ABC transporter ATPase component TERM 1252 1030038 - 1030010 - f 83 -8.9 -4.21936 | overlap 1030011 CTGACAACGGTAAAA TTGCCTGATGAAC TGG GTTTATCAGGCAT GAAAACCAACACTTT TERM 1253 1030037 - 1030011 - f 81 -12.4 -3.1268 | overlap 1030010 TGACAACGGTAAAAT TGCCTGATGAAC TGG GTTTATCAGGCA TGAAAACCAACACTT TERM 1254 1030492 - 1030508 + G 72 -4.3 -4.62069 | opp_overlap 1030492 GGTCCGTTTAAAAGA GCAACTG GCA CGGGTGC TTTTTCAACTCAAAA TERM 1255 1030594 - 1030626 + G 71 -3.3 -4.84146 | overlap 1030599 GATGGCTTACGGCAG CATTGGGGTAGGCAG CAG CTTTCTCCCCTGGTG TTTATTTTGTGTCCT pqiA 1030094 - 1031347 + | paraquat-inducible protein A TERM 1256 1032142 - 1032156 + G 70 -4.3 -4.58424 | GGCAGCCAGTGGCAC CGAAA ACAGC TTTCG TTTTGTATGATGATC pqiB 1031352 - 1032992 + | paraquat-inducible protein B ymbA 1033004 - 1033552 + | hypothetical protein TERM 1257 1033575 - 1033601 + F 100 -10.8 -6.02919 | opp_overlap 1033575 GATTTGTAAATATAA CCGTCTCCGGTA TGT TGCCTGAGGCGG TTTTTTTGTTTCTAA TERM 1258 1033741 - 1033767 + F 72 -3 -5.07652 | overlap 1033742 1033743 CGCGGTATTGCTTAA CTGTGATTGC ACATTTA GTAATCACTG TTTTCTTTTCCACCA rmf 1033808 - 1033975 + | ribosome modulation factor TERM 1259 1033990 - 1034020 + T 79 -8.2 -4.34345 | opp_overlap 1033993 1033997, overlap 1033992 1033997 ATTCTGTCTCTTTAA AAAGAAACCTCCGC ATT GCGGAGGTTTCGCC TTTTGATACTCTGTC TERM 1260 1033992 - 1034018 + T 90 -15.2 -2.51207 | opp_overlap 1033993 1033997, overlap 1033990 1033997 TCTGTCTCTTTAAAA AGAAACCTCCGC ATT GCGGAGGTTTCG CCTTTTGATACTCTG TERM 1261 1034017 - 1033993 - T 100 -18.7 -4.56597 | opp_overlap 1033992 1033990 1033997, overlap 1033997 CTGTCTCTTTAAAAA GAAACCTCCGC ATT GCGGAGGTTTC GCCTTTTGATACTCT TERM 1262 1034013 - 1033997 - T 100 -13.7 -4.85782 | opp_overlap 1033992 1033990 1033997, overlap 1033993 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA TERM 1263 1033997 - 1034013 + T 100 -13.7 -3.77484 | opp_overlap 1033997 1033993, overlap 1033992 1033990 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA fabA 1034563 - 1034045 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase SSON_0959 1036392 - 1034632 - | putative ATP-dependent protease ycbG 1036578 - 1037030 + | hypothetical protein TERM 1264 1037095 - 1037059 - T 95 -13.2 -3.794 | gap 1, opp_overlap 1037070, overlap 1037070 GTTCAATTTACTAAA GGCAAAAAAAACCCCGC AGCA GCGGGGTTTTTCT-ACC AGACGAGAACTTAAG TERM 1265 1037085 - 1037070 - T 100 -11.8 -5.89947 | opp_overlap 1037070, overlap 1037059 TAAAGGCAAAAAAAA CCCCGC AGCA GCGGGG TTTTTCTACCAGACG TERM 1266 1037070 - 1037085 + T 100 -11.8 -4.82901 | opp_overlap 1037070 1037059 TAAAGGCAAAAAAAA CCCCGC AGCA GCGGGG TTTTTCTACCAGACG ompA 1038146 - 1037106 - | outer membrane protein A sulA 1039010 - 1038501 - | SOS cell division inhibitor SSON_0963 1039229 - 1039858 + | hypothetical protein SSON_0964 1041983 - 1039821 - | hypothetical protein TERM 1267 1040576 - 1040550 - G 77 -2.9 -5.16572 | gap 1, overlap 1040552 1040555 1040567 1040568 1040570 ACGGAAGGCAAAAAA GAGCACGCCGGT AATA ACCAGCA-GCAC CAGCTGCCCTTCCAG TERM 1268 1040718 - 1040707 - G 72 -4.4 -4.62441 | TGGCAGACAAACAAA CTTG TCAG CAAG ATCCAATACCCGTGA TERM 1269 1041128 - 1041103 - G 74 -8.3 -3.95554 | gap 1, overlap 1041105 TGACGCAACAAAATA CA-GCGTGACAG TTG CTGGCACGCCTG GCCCTGCATCGACAT TERM 1270 1041125 - 1041105 - G 78 -11.1 -3.55864 | overlap 1041103 ACGCAACAAAATACA GCGTGACAG TTG CTGGCACGC CTGGCCCTGCATCGA yccF 1042439 - 1041993 - | hypothetical protein TERM 1271 1042025 - 1042037 + g 71 -9.1 -3.52906 | overlap 1042022 GTGCATTGGCTTCAC GCGCA GCT TGCGC TGTTTCTACCGATAC TERM 1272 1042360 - 1042346 - G 75 -5 -4.74103 | GCGGTAAGGTAAAAA TCAGCA CAA TACTGA CCAGAGTCGCCAACA helD 1042562 - 1044616 + | DNA helicase IV TERM 1273 1044640 - 1044621 - T 100 -13.6 -4.24711 | opp_overlap 1044617 1044614 GAAAACCGTAAGAAA CAGGTGGC GTTT GCCACCTG TGCAATATTACTTCA mgsA 1045106 - 1044648 - | methylglyoxal synthase TERM 1274 1045192 - 1045179 - R 88 -8.1 -4.7889 | overlap 1045181 ATAAAGACCGAAAAA GCCTG CGCA CAGGC ACAAAAATCTCAGGA SSON_0968 1045864 - 1045202 - | hypothetical protein SSON_0969 1046445 - 1045942 - | IS1 ORF TERM 1275 1046992 - 1046974 - g 77 -8.8 -4.08064 | AAGTTGCCGGCAAAA CGCTGCTG GGC CAGCAGGG GTATGGCACGCTGGC SSON_0970 1046733 - 1047227 + | hypothetical protein TERM 1276 1047232 - 1047259 + T 100 -17.1 -3.34344 | opp_overlap 1047232 TGGCCAAATAAAAAA TCCCCGGAAGG CAAAAA CCTTCCGGGGA TTCGTTCAGGGATCA TERM 1277 1047259 - 1047232 - T 100 -17.8 -5.63517 | opp_overlap 1047232 TGGCCAAATAAAAAA TCCCCGGAAGGC AAAA ACCTTCCGGGGA TTCGTTCAGGGATCA yccV 1047640 - 1047272 - | hypothetical protein TERM 1278 1047762 - 1047783 + H 72 -5.9 -4.40358 | gap 1, opp_overlap 1047766, overlap 1047766 ACATCACGGCCGGCA TCAATTGCGG CAT CCGCGAT-GA TTTTCTGAAATAAAT SSON_0973 1048932 - 1049210 + | hypothetical protein yccK 1049536 - 1049207 - | sulfurtransferase TusE TERM 1279 1049271 - 1049302 + g 91 -8 -5.06414 | opp_overlap 1049276 TTAGCCGGACCTTTC GGAAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCGCCAAA TERM 1280 1049607 - 1049581 - R 100 -10.1 -5.46657 | CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTATG AAAGTGTTAGCGGGT yccA 1050286 - 1049627 - | hypothetical protein TERM 1281 1050068 - 1050081 + g 70 -5.2 -4.42386 | GGAGATAATCCCGGT CGGC TTATTC GCCG TTTTATAGGTCAGGA TERM 1282 1050455 - 1050487 + H 77 -9.2 -3.90744 | opp_overlap 1050460, overlap 1050460 TTCGACAGGCAAAAG AAAAAGGGGTTAGC ATTTA GCTAACCCCTTATC TTATTTGGCGGAAGC TERM 1283 1050482 - 1050460 - H 100 -13.5 -5.48213 | opp_overlap 1050455 1050460 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG TERM 1284 1050460 - 1050482 + H 95 -13.5 -3.90464 | opp_overlap 1050460, overlap 1050455 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG SSON_0977 1051003 - 1051587 + | IS1 ORF hyaA 1051783 - 1052901 + | hydrogenase-1 small subunit TERM 1285 1053086 - 1053107 + G 72 -10.1 -3.35371 | gap 1, opp_overlap 1053081 1053082, overlap 1053106 CATCCTACAAGGGCG CGACCCGCGC GAT GCGTGGG-CG TTCGTTGAACGTATC TERM 1286 1054109 - 1054095 - g 72 -8.5 -3.72893 | TACTCGTGGATCAAA GCGCC GCGCT GGCGC GGTAACGCGATGGAA TERM 1287 1054347 - 1054334 - g 72 -4.5 -4.67904 | overlap 1054335 GACTAACCTGAAAAA CGGCA ATCT TGCCA CCGCCTCCACGGAAA hyaB 1052898 - 1054691 + | hydrogenase 1 large subunit hyaD 1055413 - 1056000 + | hydrogenase 1 maturation protease hyaE 1055997 - 1056335 + | hydrogenase-1 operon protein HyaE TERM 1288 1056970 - 1056992 + G 83 -6.2 -4.9792 | opp_overlap 1056971, overlap 1056971 TAATCTGACGCAATT ACCCATCAGC GAG GCTGATCGGC TTTTTCTCTCACGTC TERM 1289 1056971 - 1056991 + G 77 -9.7 -3.58029 | opp_overlap 1056971, overlap 1056970 AATCTGACGCAATTA CCCATCAGC GAG GCTGATCGG CTTTTTCTCTCACGT hyaF 1056392 - 1057249 + | nickel incorporation into hydrogenase-1 proteins TERM 1290 1057820 - 1057855 + G 70 -5.4 -4.34402 | gap 1, opp_overlap 1057820 ATTGTGGATATTGAA TGC-CAACGGTTGGATG CAA TACCCGACCGGTGCGCA TTTTGATATCGACAC TERM 1291 1057886 - 1057907 + G 78 -10.9 -3.54424 | opp_overlap 1057888 CCTACGTATGGAGAT GACCAGCTT CAGC GAGCTGGTC TTTAACCCGGTCAGC appC 1057383 - 1058927 + | third cytochrome oxidase, subunit I appB 1058939 - 1060075 + | third cytochrome oxidase, subunit II yccB 1060088 - 1060180 + | hypothetical protein TERM 1292 1060222 - 1060189 - f 81 -13.1 -2.60988 | overlap 1060186 1060185 AAGTTAACGAACGTA GGCCTGATGCGGCGC ATTA GCATCGCATCAGGCA ATCAATAATGTCAGA TERM 1293 1060628 - 1060614 - g 77 -10 -3.65542 | overlap 1060612 CGTACCCGTAAAACA GGCGAA GCC TTCGCC GCCGGGCTGGCACCT TERM 1294 1060727 - 1060714 - g 72 -4.5 -4.59853 | overlap 1060715 TTAATCCTCTAAAAA CTGGC GTTT GCCAA CTGGATAACGCGAAC appA 1060260 - 1061558 + | phosphoanhydride phosphorylase TERM 1295 1061593 - 1061570 - T 100 -14 -5.31456 | opp_overlap 1061575 GTAATGCATAAAAAA GAGCATTCAG TTAC CTGAATGCTC TGAGGCTGATGACAA TERM 1296 1061652 - 1061641 - T 71 -7.2 -4.16943 | opp_overlap 1061628 GCGTAGACCGGAAAA GGCG TTCA CGCC GCATCCGGCCACTTT yccC 1063853 - 1061673 - | cryptic autophosphorylating protein tyrosine kinase Etk TERM 1297 1062798 - 1062812 + g 72 -5.6 -4.56597 | overlap 1062800 GCGTTTGCGTTCTTG CTCCAG CGT CTGGCG TTTTTCCAGCAGCGC TERM 1298 1063434 - 1063457 + g 91 -5.2 -5.38326 | TTGTGGAATATGCAT CCAGCTGATC GCCA GCTCACCTGG TTTTTCTTTGGTTAA etp 1064319 - 1063873 - | phosphotyrosine-protein phosphatase TERM 1299 1063960 - 1063974 + g 70 -6.4 -4.1891 | opp_overlap 1063960, overlap 1063956 CTGACTTTTACGATA GGGATC CGG GATCTC TTTCTGTTCCAGCCA TERM 1300 1064265 - 1064246 - G 72 -11.4 -2.50816 | overlap 1064245 CGTTTACGCAGCAAG CGCTCGCC AATG GGCGAACG GCAAATGTTGCCGGT yccZ 1065446 - 1064307 - | putative function in exopolysaccharide production ymcA 1067588 - 1065492 - | hypothetical protein ymcB 1068334 - 1067588 - | hypothetical protein ymcC 1068975 - 1068331 - | putative regulator ymcD 1069405 - 1069082 - | hypothetical protein cspH 1070046 - 1069834 - | cold shock-like protein SSON_0996 1070646 - 1070143 - | IS1 ORF cspG 1071109 - 1071321 + | cold shock protein CspG TERM 1301 1071526 - 1071542 + G 100 -9.4 -5.4251 | opp_overlap 1071526 1071523 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCTGCC sfa 1071495 - 1071725 + | cold shock gene gnsA 1071715 - 1071888 + | GnsA TERM 1302 1072973 - 1072994 + T 86 -2.9 -5.71712 | gap 1, overlap 1072977 1072978 CCGCCCGTCGTGCCT GGCCGCCGCT GCC AGCGG-GTTC TTTTTTTCTCTGCCA TERM 1303 1072977 - 1072991 + T 80 -5.6 -4.92669 | overlap 1072973 1072978 CCGTCGTGCCTGGCC GCCGCT GCC AGCGGG TTCTTTTTTTCTCTG TERM 1304 1072978 - 1072990 + T 72 -9.1 -3.53161 | overlap 1072977 1072973 CGTCGTGCCTGGCCG CCGCT GCC AGCGG GTTCTTTTTTTCTCT torS 1075826 - 1073082 - | hybrid sensory histidine kinase TorS TERM 1305 1073512 - 1073524 + g 76 -9.1 -3.76402 | AATAATGAACTGGTA CGCTG GCG CAGCG TTTCGTCAATGACAT TERM 1306 1076034 - 1076056 + G 72 -7.6 -3.86346 | opp_overlap 1076035, overlap 1076035 GCCGCTTAAAGCCAA ACGCGCATGG AAA CTGTGCGCGC TTTATCCCAGCCTGA TERM 1307 1076035 - 1076055 + G 71 -11.1 -2.91593 | opp_overlap 1076035, overlap 1076034 CCGCTTAAAGCCAAA CGCGCATGG AAA CTGTGCGCG CTTTATCCCAGCCTG TERM 1308 1076570 - 1076540 - g 72 -8.2 -3.7456 | ATAACGATATTGAAA TCCAGCGTAACCTG TTG CAGGAGATGCTGGA ACGCCACCCAGAAAT TERM 1309 1076797 - 1076824 + G 72 -5.6 -4.48987 | gap 1 CAATTACAGGGGCAA TCGGT-GTCTGAT AAT GTCAGCCCACCGA TTTTAGTTCTGACGC torT 1075909 - 1076937 + | periplasmic sensory protein associated with the TorRS two-component regulatory system torR 1077602 - 1076910 - | DNA-binding transcriptional regulator TorR torC 1077722 - 1078894 + | trimethylamine N-oxide reductase, cytochrome c-type subunit TERM 1310 1079256 - 1079267 + T 72 -5.8 -4.38712 | CGATACCTCCCAGCG CGGT GATA ACCG TTTTGTGCGCGTGAG TERM 1311 1079669 - 1079659 - T 71 -6.8 -4.18494 | overlap 1079666 TACGCGCAGCTAAAA GCGA AAG TCGC CGCCGGTGAAATTGA TERM 1312 1081411 - 1081393 - T 86 -13.1 -3.36823 | overlap 1081388 TTGCTGAAAAGCGAA CCGCCGC TCACT GCGGCGG TGAATGCGCTGGAAA TERM 1313 1081742 - 1081721 - T 70 -2.2 -5.00616 | GTTTGCGGCAAAAAA CACTGACG GCGCTG CGGCAATG GTTACCAGAGTTTGC TERM 1314 1081887 - 1081873 - T 71 -7.1 -4.08216 | opp_overlap 1081862 1081861 1081864 1081863 TTATGCGCCTGAAAA GACGC GTTTA GCGTC GCATCAGGCATTATG TERM 1315 1081965 - 1081995 + T 83 -14 -2.73364 | opp_overlap 1081963 1081962, overlap 1081971 ATGAGCTACAAACCG GGAAAGCCGCTGGC GTA GCAGGCGGTTTTCC TGCTTCAGGTGCGCA yccD 1082249 - 1081944 - | chaperone-modulator protein CbpM TERM 1316 1081971 - 1081989 + g 78 -8 -4.3534 | opp_overlap 1081963 1081962, overlap 1081965 TACAAACCGGGAAAG CCGCTGGC GTA GCAGGCGG TTTTCCTGCTTCAGG cbpA 1083169 - 1082249 - | curved DNA-binding protein CbpA TERM 1317 1082369 - 1082383 + g 86 -6.4 -5.14563 | overlap 1082378 TTTCAGTACCGCATA CAGATC GCC GGTCTG TTTTTTGCTCACCAG TERM 1318 1082889 - 1082869 - G 72 -6.9 -4.18494 | CATGCTGACCGAAAA TTGACGAGA AGA TATCGTCAA AATCTTCGGCATTAA TERM 1319 1084479 - 1084460 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 1084442 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_1009 1083494 - 1084525 + | IS630 orf SSON_1010 1084585 - 1085145 + | hypothetical protein TERM 1320 1085406 - 1085396 - g 91 -5.4 -5.37345 | opp_overlap 1085396 TTGAATGACAAAAAA TGCA TAC TGCA TTTACCCGAATTTAT TERM 1321 1085434 - 1085447 + G 70 -6.7 -4.07568 | opp_overlap 1085434 TATATTTAATGATAA CAAGG CACG CCTTG TTTTAGACACCGACC SSON_1011 1085348 - 1085731 + | hypothetical protein TERM 1322 1085876 - 1085904 + F 93 -10.3 -4.61633 | opp_overlap 1085878 GAGGCAGGGGCTAAT CAGGCATAGTTTG CGT CAAACCTTGCCTG TTTTTGAAGATGTAT TERM 1323 1086465 - 1086449 - g 87 -4.3 -5.19212 | ATCACCAGGAAAAAA TGGGCAC TAT GGACCCA ACCTTTAACCCGGTG agp 1086025 - 1087266 + | glucose-1-phosphatase/inositol phosphatase TERM 1324 1087296 - 1087274 - T 100 -16.3 -4.84673 | opp_overlap 1087270 TGAAATAACAGAAAA CTCCCCCGC GAGAA GCGGGGGAG TCGCTGGTTAAACGT yccJ 1087531 - 1087304 - | hypothetical protein wrbA 1088157 - 1087552 - | TrpR binding protein WrbA SSON_1015 1089027 - 1089932 + | insertion element IS2 transposase InsD TERM 1325 1090863 - 1090841 - g 87 -4.3 -5.20606 | gap 1, opp_overlap 1090843 1090847, overlap 1090843 1090847 AAACAGGAAGAAAAA GATGAACTGA TAGT TCAGTT-ATC ACGAGAAAAGGCGAG TERM 1326 1090857 - 1090843 - g 72 -7.2 -4.20491 | opp_overlap 1090843 1090847, overlap 1090841 1090847 ACAGGAAGAAAAAGA TGAACT GAT AGTTCA GTTATCACGAGAAAA SSON_1016 1089944 - 1091188 + | hypothetical protein SSON_1017 1092067 - 1091312 - | putative transposase subunit TERM 1327 1091858 - 1091882 + g 93 -5.8 -5.24531 | gap 1 ACGCAGCCCTTCCGG TGT-TGCCTGA TATT TCAGGCAGGCA TTTTTTCTCAACCGT TERM 1328 1092009 - 1092028 + g 100 -15 -3.76952 | CGTTGCCGTATCAGG CTCCCGGC CATC GCCGGGAG TTTCAGTTGGGTCAG SSON_1018 1093619 - 1092084 - | putative transposase TERM 1329 1093885 - 1093915 + r 91 -7.6 -5.11033 | TTTGAAGCTACTCGA CCAGCGTTACTATT AGC ATTGGTGACGTTGG TTTTTTCAGCTTCTG SSON_1019 1096881 - 1094701 - | hypothetical protein TERM 1330 1094793 - 1094783 - G 75 -5.4 -4.62772 | TTGAAAGTAAAGAAA GATG GTT CATC TGGTCGAACGACAAC TERM 1331 1095816 - 1095832 + g 81 -6.5 -4.7497 | TAGGGAGAGTATCAG CGGAAAG TAC CTTCCCG TTTTTCATGGCTGCA TERM 1332 1096954 - 1096919 - R 100 -11.3 -4.84527 | TTCATATACGAAAAA GGGAAAGACTACCGA TATCAC TCGATAATCTCTCCC GTAGATTTTCACCCA SSON_1020 1097921 - 1097211 - | hypothetical protein TERM 1333 1098258 - 1098242 - R 73 -10.9 -2.55 | opp_overlap 1098241 TAATAGTTTAATTCA GGAAGAG TTG CTCTTCC CTATTACCATCATCT SSON_1021 1101148 - 1100195 - | hypothetical protein TERM 1334 1100249 - 1100259 + g 85 -3.2 -5.45813 | TTTTTCTTTCTTTGG CTCG GTG TGAG TTTTCTTTTTTGGTG TERM 1335 1100725 - 1100783 + g 77 -9.8 -3.70307 | overlap 1100722 1100747 1100750 ACGTGTCAAAGATTT TGACTGACTGAGTAAAAAATTTTGACTC AGT GGGTAAAGAATTTTGACTCAGTGGGTCA TCTTTCTTGACTGAC TERM 1336 1101208 - 1101182 - R 91 -8.7 -4.93079 | opp_overlap 1101206, overlap 1101206 AATAAAACAAAGAAA GGGCTGACCAC GTATA GTGACCAACCC CAGAGGGAGTGAATT SSON_1022 1102191 - 1101667 - | putative DNA methylase TERM 1337 1102362 - 1102378 + H 88 -8.1 -4.86001 | opp_overlap 1102349 1102362 1102361 AATCTGTACAGTAAC TTTTCAG AAT CTGAAAA TTTTTATAAAATCGT TERM 1338 1103901 - 1103886 - g 88 -11.8 -3.82665 | opp_overlap 1103882 1103886 CAGGATATTACCAAA CGCGGG TCTA CCCGCG TCAGTTCACTAAGCT TERM 1339 1103886 - 1103901 + G 73 -11.8 -2.55015 | opp_overlap 1103886, overlap 1103882 CAGGATATTACCAAA CGCGGG TCTA CCCGCG TCAGTTCACTAAGCT TERM 1340 1103951 - 1103936 - g 76 -7.6 -4.19817 | opp_overlap 1103943 CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTAATTCT ycdF 1103841 - 1104071 + | hypothetical protein TERM 1341 1104233 - 1104250 + T 74 -10.5 -3.23216 | opp_overlap 1104230 1104226 1104227 GTCAAAAAGCCATCA CCGCCGG TTAC CCGGTGG TTGATACTGATGACA TERM 1342 1104407 - 1104426 + T 100 -16.4 -4.84918 | opp_overlap 1104402 TGTCAACAATCTGCA CCGCCGGG TAAC CCCGGCGG TTTTCTGTTTATGGC ycdG 1105829 - 1104435 - | putative transport protein SSON_1025 1106242 - 1105784 - | hypothetical protein SSON_1026 1106879 - 1106289 - | hypothetical protein TERM 1343 1106448 - 1106437 - G 70 -7.2 -4.11216 | overlap 1106438 TGTTGACGGTCAAAA CCCG ACAT CGGG CCGGTATCCAGTCCC SSON_1027 1107689 - 1106889 - | putative acetyltransferase SSON_1030 1109605 - 1108871 - | putative synthetase TERM 1344 1109077 - 1109042 - G 87 -4.6 -5.26918 | gap 1, opp_overlap 1109049, overlap 1109043 ATACTCCAGAAAAAA GCCATCGCGTAGCGTCG ATT CGACGC-AGACGTTGGT AGCGATACCGGTGAA SSON_1031 1110694 - 1110191 - | IS1 ORF TERM 1345 1111795 - 1111782 - g 82 -2.3 -5.45652 | overlap 1111768 AGCGCGAAGAAAAAA GCGAT TCTT AGCGC AGCACTGGACACTTT ycdC 1111719 - 1112357 + | putative tet operon regulator TERM 1346 1112359 - 1112392 + T 73 -10.9 -2.61144 | opp_overlap 1112359 1112361 1112362, overlap 1112357 1112359 TTCGACCACGTTAAA GATGCCGGAGGAGGT TGTA ACATCCTCCGGCTAC CTGTTTAACCGATCG TERM 1347 1112359 - 1112393 + T 70 -9.3 -3.35775 | gap 1, opp_overlap 1112359 1112361 1112362, overlap 1112359 1112357 TTCGACCACGTTAAA GAT-GCCGGAGGAGGT TGTA ACATCCTCCGGCTACC TGTTTAACCGATCGT TERM 1348 1112393 - 1112359 - T 82 -11.5 -3.62096 | gap 1, opp_overlap 1112359 1112359 1112357, overlap 1112361 1112362 TTCGACCACGTTAAA GAT-GCCGGAGGAGGT TGTA ACATCCTCCGGCTACC TGTTTAACCGATCGT TERM 1349 1112390 - 1112361 - T 82 -12.1 -3.39018 | opp_overlap 1112359 1112359 1112357, overlap 1112359 1112362 CGACCACGTTAAAGA TGCCGGAGGAGGT TGTA ACATCCTCCGGCT ACCTGTTTAACCGAT TERM 1350 1112389 - 1112362 - T 90 -15.6 -2.63089 | opp_overlap 1112359 1112359 1112357, overlap 1112361 1112359 GACCACGTTAAAGAT GCCGGAGGAGGT TGTA ACATCCTCCGGC TACCTGTTTAACCGA TERM 1351 1112431 - 1112416 - T 83 -10.4 -3.73775 | opp_overlap 1112425 CCGATCGTCATTAAA CTGGCG TTAC CGCCAG CGGCAGCGGTATTCA putA 1116359 - 1112397 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1352 1114413 - 1114427 + g 75 -5.7 -4.62336 | CGGTTGTTCCAGCAT TGGCA AGGCC TGCCA TTTTTGCAGTGCACT TERM 1353 1115633 - 1115644 + g 70 -7.2 -4.12188 | CACCTTTGCGGATCA GCGG TTCA CCGC TTTTACCGATAATGC TERM 1354 1116053 - 1116037 - G 70 -10.9 -2.82516 | overlap 1116041 TGTTCCAGCAGCATA GAAACCG CTT CGGTTTC CGGGCGGCGATAGGC TERM 1355 1116621 - 1116604 - H 71 -3.5 -4.74801 | gap 1 CAACCTGATGAAAAA TAGTG-TC GCT GAGCACTA AAATTTAATGTAAAT putP 1116781 - 1118289 + | major sodium/proline symporter TERM 1356 1118298 - 1118286 - f 72 -6.3 -4.25283 | opp_overlap 1118297 ACGGTTGCAGGAAAA CTAAG GGA CTTAG CCTGCGGCGGTTTTG TERM 1357 1118419 - 1118369 - f 82 -11.8 -3.35695 | gap 2 GCCATATAAATTGAA TGGTGCAGGGAGCGCGCAGGGGGC GGCCA GTCGCC-GC-CGCCCCCTGCACCC CCGGGCTCTGGCGAA ycdN 1118946 - 1119785 + | high-affinity iron permease ycdO 1119843 - 1120970 + | hypothetical protein TERM 1358 1121019 - 1120996 - g 90 -9.6 -4.53036 | opp_overlap 1120994 1121010, overlap 1121010 GTATAAAGATGAAAA CGGCGTGA ATGAACCG TCACGCCG ACGTTTACTGAAAGG TERM 1359 1121098 - 1121088 - g 82 -3.2 -5.28176 | overlap 1121094 CTCATGCACAAAAAA CGCA AAG TGCA CCGGGCACGCTTTCA ycdB 1120976 - 1122247 + | hypothetical protein TERM 1360 1122817 - 1122834 + G 70 -10.5 -2.80816 | opp_overlap 1122817 1122816 GTTCGTGCGCATAAT CGCGCTG CCAA CGGCGCG TGTGATGAATACAAA TERM 1361 1123641 - 1123608 - g 90 -14.7 -2.84325 | gap 1, overlap 1123605 1123603 GTTCGGTAAAGAGGA CTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTG CATGCCTACAGTTAA phoH 1122592 - 1123656 + | hypothetical protein TERM 1362 1123671 - 1123695 + F 100 -13.6 -4.86731 | overlap 1123675 AGTGTGTTATCGGTG CAGAGCCCGG GCGAA CCGGGCTTTG TTTTATTTCAACAGA TERM 1363 1123675 - 1123691 + F 100 -10.8 -4.96996 | overlap 1123671 TGTTATCGGTGCAGA GCCCGG GCGAA CCGGGC TTTGTTTTATTTCAA SSON_1040 1124237 - 1124923 + | hypothetical protein TERM 1364 1125000 - 1124981 - f 100 -10 -5.62219 | opp_overlap 1124979 1124981 AATATACGAAAAAAA GCCCGTAC CTTC GTACGAGC TCTTCTTTAAAGATG TERM 1365 1125181 - 1125162 - f 100 -10 -5.92337 | opp_overlap 1125160 1125162 ATATACGAAAAAAAA GCCCGTAC TTTC GTACGAGC TCTTCTTTAAATATG ycdW 1125477 - 1126454 + | putative dehydrogenase TERM 1366 1126801 - 1126818 + G 72 -5.5 -4.57073 | TGGATCTGATTATTG CCGGTTT TCAT GAGCCGG TTTTTGCACCACATG ycdX 1126509 - 1127246 + | putative hydrolase ycdY 1127270 - 1127824 + | putative oxidoreductase component TERM 1367 1128363 - 1128345 - g 71 -2.2 -4.88407 | overlap 1128347 TTACGCAATGAAAAA CAGCGGCC TGT GGCTGGCG GCGCGTAGTGCAAAG ycdZ 1127878 - 1128417 + | hypothetical protein TERM 1368 1128434 - 1128408 - T 100 -9.5 -5.01811 | opp_overlap 1128412, overlap 1128412 GCAGGAAATCAAAAA TAAAGCGTGAG GGGCA CTCACGCTTTC GCTTAAACAGTAAAA TERM 1369 1128412 - 1128430 + T 83 -10.3 -3.75332 | opp_overlap 1128412 1128408 GAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1370 1128430 - 1128412 - T 100 -10.3 -5.00388 | opp_overlap 1128412, overlap 1128408 GAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1371 1128450 - 1128471 + T 91 -8.7 -5.03994 | opp_overlap 1128450 1128445 GCTTAAACAGTAAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTGTCAGG TERM 1372 1128471 - 1128450 - T 81 -8.7 -4.49756 | opp_overlap 1128450, overlap 1128445 GCTTAAACAGTAAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTGTCAGG csgG 1129315 - 1128482 - | curli production assembly/transport component, 2nd curli operon TERM 1373 1128952 - 1128965 + g 75 -4.5 -4.77165 | opp_overlap 1128952, overlap 1128953 GGATTCGGTTATTAA TGGCA ACTG TGCCG TTTTCTTGTGCCGCA TERM 1374 1129208 - 1129165 - G 85 -11.8 -3.70902 | opp_overlap 1129169, overlap 1129169 TGTTGTATACCGAAA CAAAGATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATCTTTG TAGCTCTGAGCTCGA TERM 1375 1129204 - 1129169 - G 77 -6.8 -4.48299 | opp_overlap 1129169, overlap 1129165 GTATACCGAAACAAA GATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATC TTTGTAGCTCTGAGC csgF 1129758 - 1129342 - | curli assembly protein CsgF csgE 1130172 - 1129783 - | curli assembly protein CsgE TERM 1376 1130570 - 1130591 + H 93 -8.9 -4.77036 | opp_overlap 1130573 TTCAGGCGTATTTAG CAACAATAT TTTG ATATTGTTG TTTTTCCTGCTCAAA SSON_1049 1130941 - 1131444 + | IS1 ORF SSON_1051 1132110 - 1132613 + | IS1 ORF TERM 1377 1132929 - 1132916 - f 77 -3.9 -5.11836 | AGATTTAAAAGAAAA CAAAA TATT TTTTG CGTAGATAACAGCGT csgB 1133134 - 1133589 + | curlin minor subunit csgA 1133630 - 1134082 + | cryptic curlin major subunit TERM 1378 1135040 - 1135020 - g 77 -9.7 -3.59979 | overlap 1135024 1135034 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 1379 1135036 - 1135024 - g 75 -6.9 -4.44046 | overlap 1135020 1135034 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_1054 1134198 - 1135370 + | IS21 ORF1 SSON_1055 1135370 - 1136167 + | IS21 ORF2 TERM 1380 1136239 - 1136254 + F 100 -10.4 -5.40072 | opp_overlap 1136239 ACAGTATTACAGAAA CAGGGC GCAA GCCCTG TTTTTTTCGGGAGAA TERM 1381 1136254 - 1136239 - f 87 -10.4 -4.10566 | opp_overlap 1136239 ACAGTATTACAGAAA CAGGGC GCAA GCCCTG TTTTTTTCGGGAGAA csgC 1136274 - 1136606 + | putative autoagglutination protein SSON_1057 1136727 - 1137038 + | hypothetical protein SSON_1058 1137133 - 1137666 + | hypothetical protein TERM 1382 1139008 - 1138997 - gT 70 -4.4 -4.46112 | CGTCATGCAAAGAAA GAGA TTAT TCTC AAAAAAGAACCCGCC TERM 1383 1139045 - 1139015 - gT 100 -11.8 -5.03715 | opp_overlap 1139018, overlap 1139018 ATTATTCTCAAAAAA GAACCCGCCACCAG TTT CTGGAAGCGGGTTA TGGTCAGACTGGCGT TERM 1384 1139042 - 1139018 - gT 100 -13.5 -4.62085 | opp_overlap 1139018, overlap 1139015 ATTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG TERM 1385 1139018 - 1139042 + GT 80 -11.3 -3.41051 | opp_overlap 1139015 1139018 ATTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG ymdC 1137608 - 1139089 + | putative synthase mdoC 1140254 - 1139097 - | glucans biosynthesis protein TERM 1386 1139734 - 1139711 - G 100 -3.2 -5.64274 | gap 1, overlap 1139714 1139715 CGAGGCATAAAAAAA TCACCGATAGT TTT ACCATCGA-GA ATTTTTTATTCGTTT TERM 1387 1141093 - 1141083 - g 88 -5.4 -5.22289 | CAGCAAAGATAAAAA CGAT GAA ATCG TCAGCATGCTCGGGG mdoG 1140649 - 1142184 + | glucan biosynthesis protein G mdoH 1142177 - 1144720 + | glucosyltransferase MdoH TERM 1388 1144760 - 1144724 - f 74 -3.8 -5.06414 | gap 2, opp_overlap 1144724 GCTTCGCAATAAAAA TGTAGTTGCCTGATGCGC TAC GCTTATCAGGC--CTACA TCGTTCATGCAATTT TERM 1389 1144868 - 1144851 - f 73 -2 -5.11063 | gap 1, opp_overlap 1144853, overlap 1144840 1144853 1144854 ACGAGCCAATAAAAA TACCGGC GTTAT GCCG-TA ATGCCGATCAGTTAA TERM 1390 1144943 - 1144918 - f 72 -9.1 -3.61398 | opp_overlap 1144918 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 1391 1144918 - 1144943 + F 100 -9.8 -5.61596 | opp_overlap 1144918 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_1063 1144933 - 1146279 + | IS4 orf TERM 1392 1146290 - 1146261 - f 89 -9.3 -4.59109 | opp_overlap 1146254 1146282 1146284, overlap 1146263 1146284 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACGGCGTTATGCCG TERM 1393 1146288 - 1146263 - f 100 -16.3 -3.90762 | opp_overlap 1146254 1146282 1146284, overlap 1146261 1146284 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACGGCGTTATGC TERM 1394 1146282 - 1146308 + F 85 -5.8 -5.40072 | opp_overlap 1146263 1146261 1146284, overlap 1146254 1146284 GTCAGTTGCTTAACT GACTGGCATTAC GGC GTTATGCCGGTA TTTTTTTACGGAAGA TERM 1395 1146284 - 1146306 + F 79 -8.4 -4.34482 | opp_overlap 1146263 1146261 1146284, overlap 1146254 1146282 CAGTTGCTTAACTGA CTGGCATTAC GGC GTTATGCCGG TATTTTTTTACGGAA yceK 1146332 - 1146559 + | hypothetical protein msyB 1146937 - 1146560 - | hypothetical protein SSON_1066 1147062 - 1146964 - | hypothetical protein yceE 1148066 - 1147017 - | putative transport protein TERM 1396 1148373 - 1148356 - R 100 -9.1 -5.29782 | opp_overlap 1148356 1148371 CACAGGTACAAAAAA GCCCCCT ATAA AGGAGGC TGTGTAGTCTATTAA SSON_1068 1150462 - 1149266 - | ISSfl2 ORF TERM 1397 1150299 - 1150324 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 1150279, overlap 1150285 1150300 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT SSON_1069 1151575 - 1150820 - | putative transposase subunit TERM 1398 1151366 - 1151390 + g 93 -5.8 -5.24531 | gap 1 ACGCAGCCCTTCCGG TGT-TGCCTGA TATT TCAGGCAGGCA TTTTTTCTCAACCGT TERM 1399 1151517 - 1151536 + g 100 -15 -3.76952 | CGTTGCCGTATCAGG CTCCCGGC CATC GCCGGGAG TTTCAGTTGGGTCAG SSON_1070 1153127 - 1151592 - | putative transposase TERM 1400 1153804 - 1153826 + r 78 -4.9 -5.06414 | overlap 1153795 TGTCTTTAGCAATTC GTGCTATTT ATTAA ATATAGCAC TTTTTGTTAAAACAG SSON_1071 1154920 - 1154015 - | insertion element IS2 transposase InsD SSON_1072 1155243 - 1154878 - | insertion sequence 2 OrfA protein SSON_1073 1155526 - 1155966 + | IS600 ORF2 htrB 1157434 - 1156514 - | lipid A biosynthesis lauroyl acyltransferase TERM 1401 1156902 - 1156912 + g 70 -5.4 -4.41348 | TTTAAATCTTTGCGG TCGA GCA TCGA TTTATTTGAGCGCAA TERM 1402 1157253 - 1157275 + g 72 -8.4 -3.73224 | CACAGTTCCAGGTTG CGATGCACAA TTT TTGCGCGTCG TTTCATAAAACGTAA TERM 1403 1158362 - 1158386 + G 70 -4.1 -4.63218 | opp_overlap 1158351 1158349 AATACGCCCGTAAGG CGCGCGAGCAG GGC TTGCCGGTGCG TTTTATTGGCAAAAA yceA 1157659 - 1158711 + | hypothetical protein TERM 1404 1158747 - 1158713 - T 72 -5.7 -4.46675 | opp_overlap 1158716 1158717, overlap 1158715 1158718 ATCCAACAGAATAAA TATCATTGCCGGATG CGTGC CATCCGGCAACATTT CACGCTTACTTCTGC TERM 1405 1158745 - 1158715 - T 72 -8.3 -3.83144 | opp_overlap 1158716 1158717, overlap 1158713 1158718 CCAACAGAATAAATA TCATTGCCGGATG CGTGC CATCCGGCAACAT TTCACGCTTACTTCT TERM 1406 1158717 - 1158743 + T 74 -10.9 -2.77005 | opp_overlap 1158715 1158713 1158718, overlap 1158716 AACAGAATAAATATC ATTGCCGGATG CGTGC CATCCGGCAAC ATTTCACGCTTACTT TERM 1407 1158742 - 1158718 - T 88 -14.4 -2.9735 | opp_overlap 1158717 1158716, overlap 1158715 1158713 ACAGAATAAATATCA TTGCCGGATG CGTGC CATCCGGCAA CATTTCACGCTTACT yceI 1159328 - 1158753 - | hypothetical protein SSON_1077 1159898 - 1159332 - | putative cytochrome TERM 1408 1159500 - 1159465 - G 77 -6 -4.66609 | gap 1, overlap 1159466 CACGCGAGCCAAAAA TGCAGG-GCACCGGCAA AGT CTGCCTGTGCGCCAGCG TCGGCAAGGGTCGCG SSON_1078 1160176 - 1160679 + | IS1 ORF TERM 1409 1160760 - 1160741 - T 93 -10.7 -4.57837 | opp_overlap 1160746 ATACTCCTGTAAAAA CGGCCTC ATTCTG GAGGCCG TAATGATGATTATTG solA 1161888 - 1160770 - | N-methyltryptophan oxidase TERM 1410 1161873 - 1161887 + g 100 -3.6 -5.76633 | CGCTGCCAATAATGA TGAGAT CGT ATTTCA TTTTTTTCTCTCTGC TERM 1411 1161962 - 1161978 + r 83 -9.4 -4.20084 | opp_overlap 1161956 1161962 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT TERM 1412 1161978 - 1161962 - R 76 -9.4 -3.74347 | opp_overlap 1161962, overlap 1161956 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT bssS 1162257 - 1162003 - | biofilm formation regulatory protein BssS TERM 1413 1162232 - 1162243 + g 71 -3 -4.8236 | ACGAGCGGATGAGTC TGAA TGAC TTCA TTATTTTTTTCCATC TERM 1414 1162525 - 1162510 - R 100 -11.8 -5.85244 | AAGTAAAATAAAAAA GCCGGG GCGA CCCGGC AAAAACAAAAATCAC dinI 1162792 - 1162547 - | DNA damage-inducible protein I pyrC 1163912 - 1162866 - | dihydroorotase TERM 1415 1164011 - 1163996 - R 100 -11.8 -4.91852 | opp_overlap 1163993 TGCACGAAAAATAAA GGGCGC GAAT GCGCCC TCGTCATTAATCCGT yceB 1164578 - 1164018 - | hypothetical protein TERM 1416 1164709 - 1164663 - R 83 -4.3 -5.31275 | gap 1, overlap 1164670 1164672 CGCCAGCAGAAAAAA CTGA-AAACGGCGGCAACCCGC GAAT ACAGGCTGCCGCGGCGGGTCAG GATTAAATCGCCATT TERM 1417 1164701 - 1164670 - R 100 -12.2 -4.55016 | overlap 1164663 1164672 AGAAAAAACTGAAAA CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG CGGGTCAGGATTAAA TERM 1418 1164699 - 1164672 - R 80 -13.4 -2.56715 | overlap 1164670 1164663 AAAAAACTGAAAACG GCGGCAACCCGC GAAT ACAGGCTGCCGC GGCGGGTCAGGATTA grxB 1165359 - 1164712 - | glutaredoxin 2 TERM 1419 1165448 - 1165458 + r 74 -8.2 -3.92373 | opp_overlap 1165445 1165448, overlap 1165447 CGTTCCAGCAAACGA CGCG TTG CGCG TTTCTGACTAAACTG yceL 1166631 - 1165423 - | multidrug resistance protein MdtH TERM 1420 1166134 - 1166118 - G 79 -3.5 -5.03227 | overlap 1166120 ACAGCACAAACAAAA CGGCCCC TGT GGCGCAG ACCAGGCGAAAGTCG TERM 1421 1166244 - 1166228 - G 88 -5.1 -5.30686 | opp_overlap 1166228, overlap 1166231 AACAGCGAGAAAAAA CGACAAC GTT GTTGTGG ACGGATTAGTTTCAC TERM 1422 1166714 - 1166744 + H 71 -3.4 -4.8667 | overlap 1166715 1166733 CTTCGGGGACAATAT TTTTTTATCAAAAC GTC GCTTTGATAGAGAG TTTTTATCAAATATG TERM 1423 1167132 - 1167144 + G 84 -7.7 -4.67556 | opp_overlap 1167132 ACGAAAAAGAGATTA TTGGC GTT GCCAA TTTTTCCAATGTTGT rimJ 1166867 - 1167451 + | ribosomal-protein-S5-alanine N-acetyltransferase yceH 1167462 - 1168109 + | hypothetical protein mviM 1168111 - 1169034 + | putative virulence factor TERM 1424 1169097 - 1169113 + F 100 -13.7 -4.11692 | ATTCGCCTCTTTCAG CGCCTGC CTT GCAGGCG TTTTGCCCGTGGGTC mviN 1169144 - 1170679 + | putative virulence factor TERM 1425 1170715 - 1170684 - T 72 -10.2 -2.77344 | gap 1, opp_overlap 1170683 1170686, overlap 1170683 1170687 GGACGGTGTAACAAT GCAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TATTCAGATCGAAAT TERM 1426 1170686 - 1170712 + T 86 -14.4 -2.75074 | opp_overlap 1170683 1170684 1170687, overlap 1170683 ACGGTGTAACAATGC ATTCCGGCCTGC AGT GCAGGCCGGAGA TAATATTCAGATCGA TERM 1427 1170711 - 1170687 - T 90 -15.7 -2.6563 | opp_overlap 1170686 1170683, overlap 1170683 1170684 CGGTGTAACAATGCA TTCCGGCCTGC AGT GCAGGCCGGAG ATAATATTCAGATCG flgN 1171135 - 1170719 - | protein of flagellar biosynthesis flgM 1171433 - 1171140 - | anti-sigma28 factor FlgM TERM 1428 1171177 - 1171204 + g 73 -4 -4.86621 | overlap 1171178 1171181 TGCGCTTCGTTGATC AGCGCATCGGCA ATTT TGCCGGTGTCCA TTTTTAGTTCACCGT flgA 1172168 - 1171509 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1429 1171786 - 1171814 + g 100 -14.6 -4.564 | gap 1, overlap 1171774 ATATCCAGCACCGTA CGCGG-TGGCAGG GTAT CCTGCCGTCCGCG TTTTAGTTTGACATT TERM 1430 1172382 - 1172364 - g 72 -10.2 -3.38991 | overlap 1172362 ACGTTTTCAACAAGA GGCGCTCA ATC TGCGCGCC CAGCGTCAGGAAGTG flgB 1172323 - 1172739 + | flagellar basal body rod protein FlgB TERM 1431 1172769 - 1172781 + G 72 -10.5 -3.05816 | GAATATTTTTGATAT CGCCG GGT CGGCG TTAACTGCCCAGTCC flgC 1172743 - 1173147 + | flagellar basal body rod protein FlgC TERM 1432 1173606 - 1173587 - g 86 -7.1 -4.88736 | opp_overlap 1173587 CATCACCGATAAAAA TGGCGCG GTTGTG CGCACCA TTGATATTGGTGAAC flgD 1173159 - 1173854 + | flagellar basal body rod modification protein flgE 1173879 - 1175084 + | flagellar hook protein FlgE TERM 1433 1175172 - 1175160 - g 74 -10.5 -3.26366 | opp_overlap 1175158, overlap 1175158 GACACTGAATCAACA GGCGG TAA CCGCC AGTAATCTGGCCAAT flgF 1175104 - 1175859 + | flagellar basal body rod protein FlgF TERM 1434 1176811 - 1176829 + F 74 -8.1 -3.96337 | AACTCTAAGGCTTAA CCGGTGG CAGGT TCACCGG TTTACTGATTTTTGA flgH 1176856 - 1177554 + | flagellar basal body L-ring protein flgI 1177566 - 1178663 + | flagellar basal body P-ring protein flgJ 1178663 - 1179604 + | peptidoglycan hydrolase flgK 1179670 - 1181313 + | flagellar hook-associated protein FlgK TERM 1435 1182006 - 1181995 - g 77 -7.2 -4.56969 | opp_overlap 1181996, overlap 1181982 1181996 AAGCGGATAAAGAAA CCGC CGCT GCGG CGTTAGATAAAACCA TERM 1436 1181996 - 1182008 + G 72 -10.5 -3.05384 | opp_overlap 1181982 1181995 1181996 AGCGGATAAAGAAAC CGCCG CTG CGGCG TTAGATAAAACCAAC TERM 1437 1182008 - 1181996 - g 76 -10.5 -3.33097 | opp_overlap 1181996, overlap 1181982 1181995 AGCGGATAAAGAAAC CGCCG CTG CGGCG TTAGATAAAACCAAC flgL 1181325 - 1182278 + | flagellar hook-associated protein FlgL TERM 1438 1182320 - 1182348 + T 100 -12.4 -5.54264 | overlap 1182345 TGGGTATGTTTTGTC TGCCTGCTCTGG GATCG CCGGGGCGGGCA TTTTTTTGCCTATTT TERM 1439 1182452 - 1182433 - T 100 -11.4 -5.69793 | opp_overlap 1182433 AGATGAAATAAAAAA GCCCTGGC AGTT ACCAGGGC TTGATTACTTGAGCT TERM 1440 1182433 - 1182452 + T 77 -10.7 -3.45634 | opp_overlap 1182433 AGATGAAATAAAAAA GCCCTGG CAGTTA CCAGGGC TTGATTACTTGAGCT rne 1185658 - 1182473 - | ribonuclease E TERM 1441 1184053 - 1184080 + g 73 -9.2 -3.61894 | gap 1 GCGCTGGCGGCACAT CCGGCA-TGGCAA AGG TTGCCAGTGCAGG TTGTTCAGGACGCTT TERM 1442 1185056 - 1185070 + g 88 -5.6 -5.18357 | CAGGAACGGAGCCGG GCGGCT TTC AGCGGC TTTTTTGATGGCTTC SSON_1105 1185739 - 1186113 + | hypothetical protein yceC 1186231 - 1187190 + | 23S rRNA pseudouridylate synthase C TERM 1443 1187261 - 1187214 - T 76 -11.8 -2.60219 | opp_overlap 1187222 1187223, overlap 1187213 1187232 1187233 TATAAGCCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCTGCAC CGATTGCCGGATGCG TERM 1444 1187287 - 1187232 - T 74 -10.3 -3.28712 | opp_overlap 1187223 1187222, overlap 1187214 1187213 1187233 CGGTTGGCCTGATAA GGCGTTTACGCCGCATCAGGCCGCC TGCACC GATTGCCGGATGCGACGTAACCGCA TCCAGCGCAAACAAC TERM 1445 1187286 - 1187233 - T 83 -13.8 -2.57132 | opp_overlap 1187223 1187222, overlap 1187214 1187213 1187232 GGTTGGCCTGATAAG GCGTTTACGCCGCATCAGGCCGCC TGCACC GATTGCCGGATGCGACGTAACCGC ATCCAGCGCAAACAA yceF 1187886 - 1187302 - | Maf-like protein TERM 1446 1187998 - 1187987 - H 71 -3.6 -4.78077 | overlap 1187988 1187991 CTGAACGAAAATAAA GCAG TAAC CCGC AATGTGTGCGAATTA TERM 1447 1188017 - 1188045 + H 83 -10.3 -3.74077 | opp_overlap 1188023, overlap 1188023 GTGTGCGAATTATTG GCAAAAGGCAACC ACA GGCTGCCTTTTTC TTTGACTCTATGACG TERM 1448 1188039 - 1188023 - H 83 -10.1 -4.12902 | opp_overlap 1188023 1188017 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT TERM 1449 1188023 - 1188039 + H 95 -7.9 -5.31519 | opp_overlap 1188023, overlap 1188017 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT yceD 1188085 - 1188606 + | hypothetical protein rpmF 1188658 - 1188831 + | 50S ribosomal protein L32 TERM 1450 1188847 - 1188832 - f 70 -9 -3.34895 | opp_overlap 1188818 GTCATCGCTAAGTAA TCACGC GTCT GCGTGA TGAAGCTTAGTGAGG TERM 1451 1188968 - 1188997 + G 78 -10.7 -3.51032 | overlap 1188969 1188972 TTTTGGCCCTTCCGT GACAGTGCCTGCA GCAT TGCAGGCACTGAA TTCTAATTCGCAACT TERM 1452 1188969 - 1188996 + G 85 -14.2 -2.70298 | overlap 1188968 1188972 TTTGGCCCTTCCGTG ACAGTGCCTGCA GCAT TGCAGGCACTGA ATTCTAATTCGCAAC TERM 1453 1188972 - 1188993 + G 90 -14.5 -2.63347 | overlap 1188969 1188968 GGCCCTTCCGTGACA GTGCCTGCA GCAT TGCAGGCAC TGAATTCTAATTCGC plsX 1188912 - 1189982 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 1190050 - 1191003 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1454 1191406 - 1191389 - g 73 -11.3 -2.80522 | overlap 1191388 AGCTCATGCAAGAAG CCGTACC GGAA GGTACGG GCGCTATGGCGGCAA fabD 1191019 - 1191948 + | malonyl-CoA-[acyl-carrier-protein] transacylase TERM 1455 1192000 - 1191980 - g 90 -7.5 -4.86621 | overlap 1191982 ATTTTGAAGGAAAAA TCGCACTGG TAA CCGGTGCAA GCCGCGGAATTGGCC fabG 1191961 - 1192695 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1192906 - 1193142 + | acyl carrier protein TERM 1456 1193178 - 1193150 - f 71 -9.6 -3.15056 | gap 1, opp_overlap 1193151 1193154, overlap 1193148 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTTGTCC TERM 1457 1193151 - 1193177 + F 100 -13.1 -5.02287 | gap 1, opp_overlap 1193150 1193148, overlap 1193154 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTTGTC TERM 1458 1193154 - 1193175 + F 90 -15.9 -2.72919 | opp_overlap 1193150 1193148, overlap 1193151 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTTG TERM 1459 1193603 - 1193583 - g 70 -3.9 -4.68384 | overlap 1193588 ACTGATCGAAGAAAA CCACACATC TCT GATGAACGG TGGTCCACGTAAGAT TERM 1460 1193899 - 1193874 - g 74 -10.3 -3.51329 | TACCCGCAATGATAA CCCGCAAGCGG CGAG CCGCCCGTGGG ATAAAGAGCGTGATG fabF 1193230 - 1194471 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1461 1194497 - 1194512 + F 100 -8.2 -5.52096 | opp_overlap 1194497 CCCACCCATATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT TERM 1462 1194512 - 1194497 - f 72 -6 -4.55287 | opp_overlap 1194497 CCCACCCATATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT pabC 1194591 - 1195400 + | 4-amino-4-deoxychorismate lyase yceG 1195403 - 1196425 + | hypothetical protein TERM 1463 1196874 - 1196859 - g 91 -11.8 -4.08692 | GAAGTTGGCTTAAAA CGCGCG CGTG CGCGCG GCGAGCTGGATCGTA tdk 1196415 - 1197056 + | thymidylate kinase TERM 1464 1197102 - 1197092 - g 81 -6.8 -4.59773 | CCTGATTTCGAAAAA CTGG TAG CCAG CTATCAGGCCGGAAG TERM 1465 1197458 - 1197472 + G 71 -2.8 -4.7497 | opp_overlap 1197468 ACGCTTGAAGAGCCA CCAG CAGAAAC CTGG TTTTTCCTGGCTACC TERM 1466 1197634 - 1197661 + G 72 -7.7 -3.90922 | gap 1 CGCATTGCGCTTAAG CGCCGGT-TCGC CTGGC GCGGCACTGGCG TTGTTTCAGGGAGAT holB 1197053 - 1198057 + | DNA polymerase III subunit delta' ycfH 1198068 - 1198865 + | putative metallodependent hydrolase TERM 1467 1198937 - 1198910 - f 74 -8.4 -3.93057 | overlap 1198911 GCTAAAACGAGTAAA GTTCACCGCCGA AAAT TGGGCGGTGAAT AACCACGTTTGAAAT TERM 1468 1198936 - 1198911 - f 78 -11.9 -2.95111 | overlap 1198910 CTAAAACGAGTAAAG TTCACCGCCGA AAAT TGGGCGGTGAA TAACCACGTTTGAAA TERM 1469 1200004 - 1199987 - g 70 -4 -4.61566 | opp_overlap 1199987 1199985 TGCTAAACCAGAAAA CCGCGC GAAAGT GGGCGG TATTATGATCTCCGC ptsG 1199160 - 1200593 + | glucose-specific PTS system IIBC components TERM 1470 1200618 - 1200635 + T 91 -8.3 -5.04987 | opp_overlap 1200618 CGTTGGGGAGACTAA GGCCGCC AGAT GGCTGCC TTTTTTACAGGTGTT fhuE 1202842 - 1200653 - | ferric-rhodotorulic acid outer membrane transporter TERM 1471 1201348 - 1201373 + g 79 -4.7 -4.88736 | gap 1, opp_overlap 1201346 1201348 CATTGATGTCAAACA CCAGACCAGCGT AAG GCG-TGGTGTGG TTTTTCTCCATGCTG TERM 1472 1203400 - 1203390 - g 75 -5.4 -4.59773 | CCGTAGCGGCAAAAA TTGC TGA GCAA GAAGGTATTGCCGAA ycfF 1203176 - 1203535 + | purine nucleoside phosphoramidase ycfL 1203538 - 1203915 + | hypothetical protein ycfM 1203929 - 1204570 + | hypothetical protein TERM 1473 1204580 - 1204601 + G 91 -9.4 -4.58685 | CAATAATCCCATCAC GCGCGACG AATTGC TGTCGCGC TTTTTCCCGCAGTTT thiK 1204551 - 1205375 + | thiamine kinase TERM 1474 1206280 - 1206290 + G 70 -6.8 -4.08706 | opp_overlap 1206280 CCGATCAAGGCAGAA CGTG TTA CACG TTTGTATCATAAAGG ycfO 1205386 - 1206411 + | beta-hexosaminidase ycfP 1206434 - 1206976 + | hypothetical protein ndh 1207384 - 1208688 + | respiratory NADH dehydrogenase TERM 1475 1208755 - 1208787 + F 76 -12 -2.61199 | opp_overlap 1208764, overlap 1208754 TGGTACGAGCGGTAG GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC ATTCCTTCAGACTTC ycfJ 1208915 - 1209454 + | hypothetical protein TERM 1476 1209477 - 1209503 + T 100 -10.1 -5.43866 | GTACTCTGCAATTTG GCCCCTCATTC GCTCA GGCTGAGGGGC TTTTTTTGCGACTTA ycfQ 1210226 - 1209516 - | hypothetical protein TERM 1477 1210104 - 1210114 + g 100 -2.4 -5.77853 | GTCGAACACTTTTGG GCGG CCA CGGC TTTTTTTTACACATT TERM 1478 1210410 - 1210421 + G 70 -5.8 -4.15006 | opp_overlap 1210405 ACGTAAAAACCCTCA TCGC TGCG GCGA TTTTAAGCTCCATGT ycfR 1210388 - 1210645 + | hypothetical protein TERM 1479 1210684 - 1210710 + T 100 -18.8 -5.93809 | CTACTGCTGATTTTT TCCCCGCGACAT GCC GTGTCGCGGGGA TTTTTTTTATCCAGG ycfS 1211546 - 1210728 - | hypothetical protein TERM 1480 1211798 - 1211819 + r 72 -10.8 -2.79492 | overlap 1211797 TGTAAATGTTGCAGA TGGGGGCG CAGAAA CGCCCCCG ATTTACCATTAAGCG mfd 1215274 - 1211828 - | transcription-repair coupling factor TERM 1481 1214045 - 1214055 + g 72 -5.4 -4.45544 | opp_overlap 1214032 AAGACGCATAATGCG TTGC GGA GCAA TTTTAATTCGTGCGA TERM 1482 1214155 - 1214170 + g 82 -3.2 -5.20333 | opp_overlap 1214151, overlap 1214151 CGAGGAACTTACGCA GCGC ATCCAGCG GCGC TTTTTGTTGTGCCTG TERM 1483 1215397 - 1215380 - R 85 -12.7 -3.30701 | opp_overlap 1215377 1215380 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGTTTAACGAGAGT TERM 1484 1215380 - 1215397 + r 79 -12.7 -2.90615 | opp_overlap 1215380, overlap 1215377 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGTTTAACGAGAGT ycfT 1216475 - 1215402 - | hypothetical protein TERM 1485 1215820 - 1215805 - G 81 -9 -4.08651 | opp_overlap 1215819, overlap 1215817 ACGGTAAGCAAAGAA GCCATC AGCA GATGGC GGCGCAACGGCACCT TERM 1486 1217467 - 1217454 - g 90 -8.1 -4.77157 | overlap 1217447 TTAAGTCAGCAAAAA CTGCC TGAA GGCAG CAAATGGCAGGACTG TERM 1487 1217561 - 1217573 + G 84 -10.5 -3.72051 | GCTGAGCCTGATTGT CGCCG TTG CGGCG TTTAACATTATTACC ycfU 1216737 - 1217936 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1217929 - 1218630 + | lipoprotein transporter ATP-binding subunit ycfW 1218630 - 1219874 + | outer membrane-specific lipoprotein transporter subunit LolE ycfX 1219903 - 1220814 + | N-acetyl-D-glucosamine kinase TERM 1488 1220894 - 1220878 - g 81 -5.8 -4.85782 | gap 1, opp_overlap 1220878 1220881 1220884 TTTCGTAAAAATAAA CGC-CGC CTGC GCGAGCG TTTGCGTCAGCGTAT TERM 1489 1220897 - 1220908 + G 82 -2.2 -5.41143 | overlap 1220884 1220881 GCCTGCGCGAGCGTT TGCG TCAG CGTA TTTTTTTCAGAGATA cobB 1220830 - 1221651 + | NAD-dependent deacetylase TERM 1490 1221797 - 1221776 - T 100 -13.7 -5.26875 | opp_overlap 1221776 TTGCTAACTAAAAAA CGGGCGGTA ATAC CACCGCCCG TTTGCTGAATTAACG TERM 1491 1221776 - 1221797 + T 95 -13 -3.794 | opp_overlap 1221776 TTGCTAACTAAAAAA CGGGCGGT AATACC ACCGCCCG TTTGCTGAATTAACG potD 1222853 - 1221807 - | spermidine/putrescine ABC transporter periplasmic substrate-binding protein potC 1223644 - 1222850 - | spermidine/putrescine ABC transporter membrane protein potB 1224498 - 1223641 - | spermidine/putrescine ABC transporter membrane protein potA 1225618 - 1224482 - | putrescine/spermidine ABC transporter ATPase protein pepT 1225868 - 1227094 + | peptidase T TERM 1492 1227128 - 1227102 - T 100 -15.2 -4.32201 | opp_overlap 1227102, overlap 1227103 GGAAGTAAGCGAAAA GGGATGCGGCAT GTG ATGCCGCATCCG GCTTAAATCCAAACT TERM 1493 1227127 - 1227103 - T 100 -18.7 -3.18598 | opp_overlap 1227102, overlap 1227102 GAAGTAAGCGAAAAG GGATGCGGCAT GTG ATGCCGCATCC GGCTTAAATCCAAAC ycfD 1228273 - 1227143 - | hypothetical protein phoQ 1229800 - 1228340 - | sensor protein PhoQ TERM 1494 1228949 - 1228959 + g 77 -8.2 -4.13014 | CGTACTTTGCAGCAC CGCC AGT GGCG TTTTCAGACTATGGG TERM 1495 1228983 - 1229022 + g 72 -4.3 -4.60041 | gap 1 CTATGGGTCAGGTCG GTGAGCGTCGTACGGTAT TTGTC GTAACGTTCG-CGTTCAC TTTTTAACAATCGGT phoP 1230471 - 1229800 - | DNA-binding transcriptional regulator PhoP TERM 1496 1230631 - 1230600 - R 76 -9.4 -3.6968 | gap 1, overlap 1230601 1230603 GGATAATCTTAATAA GCAG-GCCGGACAGC ATC GCCATCCGGCACTGA TACGAGTTTATTTCA TERM 1497 1230630 - 1230601 - R 82 -12.9 -2.81326 | gap 1, overlap 1230600 1230603 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG ATACGAGTTTATTTC TERM 1498 1230627 - 1230603 - R 70 -9.9 -2.94759 | overlap 1230601 1230600 TAATCTTAATAAGCA GGCCGGACAGC ATC GCCATCCGGCA CTGATACGAGTTTAT purB 1232009 - 1230639 - | adenylosuccinate lyase ycfC 1232654 - 1232013 - | hypothetical protein TERM 1499 1232514 - 1232495 - G 75 -5.7 -4.59773 | gap 1, opp_overlap 1232496, overlap 1232496 CGCTACCGCCAAAAA CCGCCAGC GTCGA GCTGG-GG TTCATATCAATAATA trmU 1233796 - 1232690 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase SSON_1152 1234311 - 1233850 - | putative phosphohydrolase ymfC 1234944 - 1234321 - | 23S rRNA pseudouridine synthase E TERM 1500 1234922 - 1234934 + g 77 -2.7 -5.11613 | overlap 1234923 CGCTTAACCTGGTGA TTTCT AAA AGAAG TTTTTTGCATGGTAT icdA 1235146 - 1236396 + | isocitrate dehydrogenase TERM 1501 1236419 - 1236443 + T 100 -10 -5.05113 | opp_overlap 1236422, overlap 1236422 ATGAGTTAAATATTG AAACGGGCGT ATAAC ACGCCCGTTG TTTTATTTATGTGGA TERM 1502 1236422 - 1236440 + T 100 -11.7 -4.60302 | opp_overlap 1236422, overlap 1236419 AGTTAAATATTGAAA CGGGCGT ATAAC ACGCCCG TTGTTTTATTTATGT TERM 1503 1236440 - 1236422 - T 93 -12.4 -3.81539 | opp_overlap 1236422 1236419 AGTTAAATATTGAAA CGGGCGTA TAA CACGCCCG TTGTTTTATTTATGT TERM 1504 1236504 - 1236521 + T 71 -3.3 -4.91109 | opp_overlap 1236494, overlap 1236506 1236507 ATGAAGCCCATTACT TGAGCCC ATAT GGGCATA TTTTTATAATGCAAC ycgW 1236822 - 1236499 - | hypothetical protein TERM 1505 1237279 - 1237303 + r 73 -4.2 -4.90455 | opp_overlap 1237282, overlap 1237282 GTGCGTTAAGTATTG AAACGGGCGT ATGGC ACACCCGTTG TTTTTATAAATATAT TERM 1506 1237282 - 1237300 + r 72 -5.9 -4.5448 | opp_overlap 1237282, overlap 1237279 CGTTAAGTATTGAAA CGGGCGT ATGGC ACACCCG TTGTTTTTATAAATA TERM 1507 1237300 - 1237282 - R 76 -8.8 -3.71527 | opp_overlap 1237282 1237279 CGTTAAGTATTGAAA CGGGCGTA TGG CACACCCG TTGTTTTTATAAATA ycgX 1237922 - 1237518 - | hypothetical protein TERM 1508 1237577 - 1237589 + g 70 -5.5 -4.3953 | GCGTATTATCAATGG CGTAG TAA CTGCG TTTGTTATGATTAAC ycgE 1238874 - 1238143 - | putative transcriptional regulator TERM 1509 1238960 - 1238925 - H 76 -9.3 -3.70109 | TACACGACCCAATAA TACTTTGTACAATAT ACGCTA AAATTGTACAAAGTA TAAATAAGATTTCAG TERM 1510 1239669 - 1239692 + H 73 -8 -4.03885 | CCCCGTCTTTACGCT GCCCAACCGC TATG GCTGATGGGC TTCATTTTTTTGCAC SSON_1159 1240529 - 1241032 + | IS1 ORF SSON_1160 1241774 - 1242679 + | insertion element IS2 transposase InsD TERM 1511 1242830 - 1242804 - T 100 -16.7 -4.18018 | opp_overlap 1242802 1242799 CCCCGTTAGCTAAAA TACCGCGTCGA ATTCA TCGACGCGGTA ACATATTAAATATTA SSON_1161 1243178 - 1242843 - | hypothetical protein SSON_1162 1243466 - 1243182 - | hypothetical protein TERM 1512 1243302 - 1243317 + g 72 -4.7 -4.62069 | GGCGGCACCCACTTT TGCAC CTTTAC GTGCA TTTTTACCGTCGCGG TERM 1513 1244205 - 1244190 - R 84 -10.4 -3.85704 | opp_overlap 1244190 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGG TERM 1514 1244190 - 1244205 + r 93 -10.4 -4.54727 | opp_overlap 1244190 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGG TERM 1515 1244271 - 1244252 - R 90 -7 -5.40072 | overlap 1244253 TCTGGGGCAAAAAAA GCCCGCCA GTTA CGGCGGGA AACCTCATCCTATGG TERM 1516 1244270 - 1244253 - R 83 -10.5 -3.83561 | overlap 1244252 CTGGGGCAAAAAAAG CCCGCCA GTTA CGGCGGG AAACCTCATCCTATG TERM 1517 1244521 - 1244494 - R 100 -11.4 -4.76041 | overlap 1244495 GAGAGGGATGAAAAA CTCAAGGCAGAA ATGA CTCTGCCTTGAA GATAAATGCGTTTTT TERM 1518 1244520 - 1244495 - R 85 -12.7 -3.44902 | overlap 1244494 AGAGGGATGAAAAAC TCAAGGCAGAA ATGA CTCTGCCTTGA AGATAAATGCGTTTT minE 1244812 - 1244546 - | cell division topological specificity factor MinE minD 1245628 - 1244816 - | cell division inhibitor MinD minC 1246347 - 1245652 - | septum formation inhibitor ycgJ 1246867 - 1247235 + | hypothetical protein ycgK 1247744 - 1247343 - | hypothetical protein TERM 1519 1247839 - 1247851 + H 74 -3.3 -5.00616 | opp_overlap 1247839 1247840, overlap 1247824 CTGCGTTCGGTAAAA TCCCG GCG CGGCA TTTTTTGCCGGGGGG ycgL 1247953 - 1248279 + | hypothetical protein ycgM 1248351 - 1249010 + | hypothetical protein ycgN 1249102 - 1249548 + | hypothetical protein SSON_1171 1250840 - 1250337 - | IS1 ORF SSON_1172 1251890 - 1251387 - | IS1 ORF umuD 1252592 - 1253011 + | DNA polymerase V subunit UmuD SSON_1176 1254717 - 1253521 - | ISSfl2 ORF TERM 1520 1253574 - 1253546 - G 71 -3.2 -4.82901 | TGCGGGGTATAAAAA GTCCCG-TCGCGCA TCA TG-GCGAACAGAAC GTCGCAGCGTCGTCT TERM 1521 1254554 - 1254579 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 1254534, overlap 1254540 1254555 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 1522 1255766 - 1255749 - R 100 -12.7 -5.14965 | AGCGGCAGGAAAAAA GCGCTCC CGCA GGAGCGC CGAATGGATTAGCGA dsbB 1256305 - 1255775 - | disulfide bond formation protein B TERM 1523 1255932 - 1255899 - G 81 -4.5 -5.1287 | gap 1, overlap 1255901 TCCAGACCTAAAAAA TC-CCACTGACGCTCG GCG CAATCGCCAGAGGCGA CAAACACTTGCGGCA TERM 1524 1256417 - 1256444 + r 79 -9.8 -3.79113 | opp_overlap 1256415 1256421, overlap 1256421 TATCGGGCGAAAAGG CAAACCGGGCAT TTAT ATGCCCGGTAAG TTGTTATCAAAGCGT TERM 1525 1256440 - 1256421 - R 100 -13.6 -3.92659 | opp_overlap 1256417 1256421, overlap 1256415 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA TERM 1526 1256421 - 1256440 + r 83 -13.6 -2.68806 | opp_overlap 1256421 1256415, overlap 1256417 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA nhaB 1257992 - 1256451 - | sodium/proton antiporter TERM 1527 1256934 - 1256916 - G 80 -5.3 -4.88736 | gap 1 GACTACCGAGAAAAA CACCGTCA ACAG TG-CGGTG AATGGCAGAGATTCG fadR 1258213 - 1258932 + | fatty acid metabolism regulator TERM 1528 1258955 - 1258970 + T 100 -8.2 -5.80727 | opp_overlap 1258934 1258955 CGTTTAAAGAGCAAA CCCCTC AAAC GGGGGG TTTTTTGTTGTTTTT ycgB 1260516 - 1258984 - | hypothetical protein TERM 1529 1259927 - 1259939 + g 76 -4.1 -5.01732 | TGCCGGGCTTTCTCT TCTTG CAG CGAGA TTTTTTGCGGGCGTT dadA 1260846 - 1262144 + | D-amino acid dehydrogenase small subunit dadX 1262154 - 1263224 + | alanine racemase TERM 1530 1263332 - 1263358 + T 79 -10.3 -3.53224 | opp_overlap 1263334 AGCCATTGCCCATGA TAGTGTCCATT AAAAG GATGGACACTA TTTCCCCGGAACCTG ycgO 1265347 - 1263611 - | potassium/proton antiporter ldcA 1266356 - 1265442 - | L,D-carboxypeptidase A mltE 1266342 - 1267067 + | murein transglycosylase E TERM 1531 1267075 - 1267089 + Tr 74 -5.6 -4.58283 | CGATGTAAATCAGTC GCGCAC TTT GTCCGC TTTTTCCCGGGCTTC ycgR 1267803 - 1267069 - | hypothetical protein ymgE 1267971 - 1268225 + | transglycosylase associated protein SSON_1188 1268277 - 1268579 + | IS600 ORF1 SSON_1189 1268720 - 1269433 + | IS600 ORF2 SSON_1191 1270881 - 1270168 - | IS600 ORF2 SSON_1192 1271324 - 1271022 - | IS600 ORF1 TERM 1532 1273006 - 1272975 - g 87 -13.9 -3.01785 | overlap 1272970 1272968 TGCTAAAACATCAGA CGGCACCTACATT GCAGTA AATGTAGATGCCG CTACAGGTAACACGT fliC 1271890 - 1273464 + | flagellar filament structural protein TERM 1533 1273500 - 1273484 - f 100 -15.1 -3.55761 | opp_overlap 1273484 CACTTATCGCTCAAA CCCCGCC ACC GGCGGGG TTTTTTCTGTCCGCA TERM 1534 1273484 - 1273500 + F 100 -15.1 -5.36441 | opp_overlap 1273484 CACTTATCGCTCAAA CCCCGCC ACC GGCGGGG TTTTTTCTGTCCGCA TERM 1535 1273672 - 1273684 + G 71 -9.1 -3.49653 | opp_overlap 1273671 1273670 TAATGGATAAACACT CGCTG TGG CAGCG TTATGTCCCGCTGGT TERM 1536 1274234 - 1274211 - g 72 -4.6 -4.59773 | CCGGAGCGCGAAAAA CTGGTATTAA CCCT CTATTACCAG GAAGAGCTGAATCTC fliA 1273629 - 1274348 + | flagellar biosynthesis sigma factor TERM 1537 1274598 - 1274612 + F 72 -5.6 -4.52703 | overlap 1274599 GAACAAAAATCATGG GCGGCA TTG TGCCGA TTTTGTGGTGATTTA TERM 1538 1274599 - 1274611 + F 70 -9.1 -3.30538 | overlap 1274598 AACAAAAATCATGGG CGGCA TTG TGCCG ATTTTGTGGTGATTT TERM 1539 1274625 - 1274647 + F 79 -4.1 -5.17054 | CGATTTTGTGGTGAT TTACACTGC AAAAC GCAGAGTGA TTTTTTCGATATTAT SSON_1196 1274968 - 1275471 + | IS1 ORF TERM 1540 1276286 - 1276263 - g 79 -2.3 -5.22039 | CTGAAAGGCAAAAAA GTGGGTGTC GGTCTG GGCACCAAC TATGAAGAGTGGCTG TERM 1541 1276446 - 1276432 - g 84 -7.8 -4.63486 | ATCTGGTGAAGAAAA CCAACG ATA CGCTGG CAGTAACCGGTGAAG fliY 1275810 - 1276610 + | cystine transporter subunit SSON_1198 1277695 - 1276664 - | IS630 orf TERM 1542 1276710 - 1276729 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 1276722 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG yedO 1277870 - 1278856 + | D-cysteine desulfhydrase TERM 1543 1279022 - 1279037 + G 81 -4.6 -5.08178 | overlap 1279023 CGCCAATCTGGCCCG TGCGCT GGCT GGCGCG TTTTTATATCTCTAT TERM 1544 1279314 - 1279326 + G 72 -7.7 -3.88291 | GGTGGCGTTGCCGCC GCTGT CGA ACAGC TTTATCAGCCTGGTA yecS 1278871 - 1279539 + | putative transport system permease protein (former yecC) TERM 1545 1280152 - 1280178 + G 81 -6.4 -4.82901 | opp_overlap 1280147, overlap 1280154 CGCACGAAATGAGCT TTGCCCGGGATG TTG CGGACCGGGCGA TTTTTATGGACCAGG yecC 1279536 - 1280288 + | putative amino-acid ABC transporter ATP-binding protein YecC TERM 1546 1280329 - 1280299 - f 89 -5.3 -5.70522 | gap 1, opp_overlap 1280323 1280324, overlap 1280300 1280302 AATAATAAGAAAAAA TCAGCCCCGAC-GA TTCA CCTGTCGGGGCGGG ACGCCATTTCAAGCG TERM 1547 1280328 - 1280300 - f 77 -8.8 -3.98653 | gap 1, opp_overlap 1280323 1280324, overlap 1280299 1280302 ATAATAAGAAAAAAT CAGCCCCGAC-GA TTCA CCTGTCGGGGCGG GACGCCATTTCAAGC TERM 1548 1280326 - 1280302 - f 75 -10 -3.54636 | gap 1, opp_overlap 1280323 1280324, overlap 1280300 1280299 AATAAGAAAAAATCA GCCCCGAC-GA TTCA CCTGTCGGGGC GGGACGCCATTTCAA sdiA 1280518 - 1281240 + | DNA-binding transcriptional activator SdiA TERM 1549 1281299 - 1281273 - T 84 -8.7 -4.70659 | opp_overlap 1281273 1281274, overlap 1281274 TGCCAGATGCAAAAA TCGGCTGAAAG GCACG CTCTCAGCCGG TTTTATATTACTGAC TERM 1550 1281273 - 1281299 + T 84 -8.7 -4.70583 | opp_overlap 1281273 1281274, overlap 1281274 TGCCAGATGCAAAAA TCGGCTGAAAG GCACG CTCTCAGCCGG TTTTATATTACTGAC TERM 1551 1281298 - 1281274 - T 85 -12.2 -3.41913 | opp_overlap 1281274 1281273, overlap 1281273 GCCAGATGCAAAAAT CGGCTGAAAG GCACG CTCTCAGCCG GTTTTATATTACTGA TERM 1552 1281274 - 1281298 + T 73 -10 -3.41627 | opp_overlap 1281273 1281274, overlap 1281273 GCCAGATGCAAAAAT CGGCTGAAAG GCACG CTCTCAGCCG GTTTTATATTACTGA yecF 1281531 - 1281307 - | hypothetical protein TERM 1553 1281379 - 1281390 + g 81 -5.8 -4.77986 | GGTTTCGTCTTCGAT CAGC GCAA GCTG TTTTTCCATCTTTAA TERM 1554 1281740 - 1281751 + H 73 -4.4 -4.80167 | ATTAATGTTACATAT TCAG CGGG CTGA TTTTCATTTTTGCTG uvrY 1281990 - 1282646 + | response regulator uvrC 1282643 - 1284475 + | excinuclease ABC subunit C pgsA 1284532 - 1285080 + | phosphatidylglycerophosphate synthetase TERM 1555 1285274 - 1285258 - f 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 1556 1285338 - 1285316 - f 73 -7.7 -4.13767 | CGCTCCAGTTTAAAA GACATCGGC GTCAA GCGGATGTC TGGCTGAAAGGCCTG TERM 1557 1285493 - 1285473 - f 72 -10.5 -2.89742 | overlap 1285476 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGTTCGCGCTGTGC TERM 1558 1285581 - 1285594 + F 100 -8.1 -5.64274 | opp_overlap 1285581 AGCAGTGTCGTGAAA CCACC TTCG GGTGG TTTTTTTGTGCCTGC TERM 1559 1285676 - 1285664 - f 78 -6.3 -4.69027 | AAAGCCACTCAAAAA GTATC TCT GATAC GGACCGGCATGTAAG yecA 1285730 - 1286395 + | hypothetical protein tyrP 1287668 - 1286457 - | tyrosine-specific transport system TERM 1560 1286707 - 1286697 - G 72 -8.2 -3.7229 | overlap 1286698 ATAAAACAGTGCAAA CGCC AAC GGCG GCAGAAAGGTAATTG yecH 1287859 - 1288098 + | hypothetical protein TERM 1561 1288128 - 1288106 - T 100 -16.3 -3.61178 | overlap 1288119 GTCACTGATTTGAAA CGGCGGCAG TAAAC CTGCCGCCG GAGAGCATTAGTTTT ftn 1288633 - 1288136 - | ferritin TERM 1562 1288767 - 1288800 + r 73 -9.7 -3.34398 | opp_overlap 1288776, overlap 1288765 1288768 GCATTACCGCTATTT CTTTAATCAGCGAAG ATCC CCTCGCTGATTAAAA TATTTAGAGAAAGAC TERM 1563 1288768 - 1288799 + r 81 -13.2 -2.60496 | opp_overlap 1288776, overlap 1288767 1288765 CATTACCGCTATTTC TTTAATCAGCGAAG ATCC CCTCGCTGATTAAA ATATTTAGAGAAAGA SSON_1214 1289127 - 1288804 - | hypothetical protein TERM 1564 1289210 - 1289198 - R 72 -9.1 -3.64488 | opp_overlap 1289198 1289197 1289194 1289185, overlap 1289196 AATGGCCGGAAAAGA CGCCT GGC AGGCG CTATTTCTTGCCATC TERM 1565 1289504 - 1289477 - R 73 -10 -3.30007 | opp_overlap 1289477 1289484, overlap 1289484 AATATGTTCCGATAA CAAAAAACCTGC TCCG GCAGGTTTTTTT GTGTCCTGATGACGG TERM 1566 1289497 - 1289484 - R 100 -8.1 -5.55769 | opp_overlap 1289477 1289484, overlap 1289477 TCCGATAACAAAAAA CCTGC TCCG GCAGG TTTTTTTGTGTCCTG TERM 1567 1289484 - 1289497 + r 100 -8.1 -5.74122 | opp_overlap 1289484 1289477, overlap 1289477 TCCGATAACAAAAAA CCTGC TCCG GCAGG TTTTTTTGTGTCCTG TERM 1568 1289848 - 1289875 + r 95 -13.5 -3.86822 | opp_overlap 1289848, overlap 1289874 ATCCCATTAAAAAAA CCGCTGCTTCA AACAGA TGAGGCAGCGG TTTCTCAAAACCTTC TERM 1569 1289875 - 1289848 - R 100 -11.3 -5.52986 | opp_overlap 1289848 1289874 ATCCCATTAAAAAAA CCGCTGCTTCA AACAGA TGAGGCAGCGG TTTCTCAAAACCTTC TERM 1570 1289920 - 1289886 - R 87 -10.7 -4.07687 | opp_overlap 1289874, overlap 1289887 AGCGGTTTCTCAAAA CCTTCATCGGCGCAA TGCAT TAGCGCCGATGATGA TCAATGCAGCTGGTG TERM 1571 1289919 - 1289887 - R 78 -12 -3.04398 | overlap 1289886 GCGGTTTCTCAAAAC CTTCATCGGCGCAA TGCAT TAGCGCCGATGATG ATCAATGCAGCTGGT yecI 1290424 - 1289921 - | ferritin-like protein TERM 1572 1290982 - 1291004 + H 71 -7.8 -3.84996 | opp_overlap 1290987 ATCTGCTGTGCATTC GACAATTTGT CTG ACAAATTGGC TTTCCCTTATGTCTT araF 1291221 - 1292210 + | L-arabinose-binding periplasmic protein TERM 1573 1292250 - 1292224 - f 93 -10.8 -4.57341 | overlap 1292225 1292226 AATTTGCCGGAAAAA TTCCCCTCTGCA TGA TGCAGAGGGGGT GTGAACGACCAGTGA TERM 1574 1292249 - 1292225 - f 93 -14.3 -3.33922 | overlap 1292224 1292226 ATTTGCCGGAAAAAT TCCCCTCTGCA TGA TGCAGAGGGGG TGTGAACGACCAGTG TERM 1575 1292248 - 1292226 - f 100 -17.8 -2.60032 | overlap 1292225 1292224 TTTGCCGGAAAAATT CCCCTCTGCA TGA TGCAGAGGGG GTGTGAACGACCAGT araG 1292280 - 1293794 + | L-arabinose transporter ATP-binding protein araH 1293806 - 1294795 + | L-arabinose transporter permease protein TERM 1576 1294785 - 1294798 + F 72 -3.1 -5.00616 | opp_overlap 1294785, overlap 1294777 AGCAAAAAGCGAAAC GCATT GTCT GATGC TTTTTTCCACAACAA TERM 1577 1294834 - 1294859 + F 93 -12.6 -3.81414 | opp_overlap 1294836 CGTTTTTTCCCACCA CAGCCAGCCG CCACAA CGGTTGGCTG TTCTTCATTGCAAAT TERM 1578 1295528 - 1295541 + GF 75 -9.5 -3.5241 | overlap 1295525 1295535 GGAAGCTCCCTTTAT CGGGC GAAC GCCCG TATTTCTGGGCGATG otsB 1294962 - 1295762 + | trehalose-6-phosphate phosphatase otsA 1295737 - 1297161 + | trehalose-6-phosphate synthase yecG 1297596 - 1297168 - | universal stress protein UspC TERM 1579 1297254 - 1297221 - G 85 -14.1 -2.75382 | gap 1, opp_overlap 1297219, overlap 1297218 CACTTGAGGCAATCA CTCTTTTCGCCGAGCA GGA TGCTC-GCGAAAAGAA ACTGTGATTGTGATT TERM 1580 1298097 - 1298116 + r 72 -9.4 -3.63515 | AGTAATTGAGTGTTT TGTGTGAT CTGC ATCACACA TTATTGAAAATCGCA SSON_1223 1299108 - 1298395 - | IS600 ORF2 SSON_1224 1299551 - 1299249 - | IS600 ORF1 flhD 1299634 - 1299993 + | transcriptional activator FlhD flhC 1299996 - 1300574 + | transcriptional activator FlhC TERM 1581 1300601 - 1300624 + F 100 -8.9 -5.40474 | AGGCGCAACATTCCA GTAGCGGTA ACGACG TACCGCTGC TTTTTTTGCCCCAAT TERM 1582 1301316 - 1301336 + G 70 -3.9 -4.72029 | TTATCGCACATGCGA TGGTGGGGA CTT TCCTCGGCA TTTTATTGGCTTACG motA 1300700 - 1301587 + | flagellar motor protein MotA TERM 1583 1302472 - 1302454 - g 85 -8.8 -4.56775 | AGCGCCCTGGAAAAA CCTGAGGT TGC ACCACAGG TCAGTGTTCCCACAA motB 1301584 - 1302510 + | flagellar motor protein MotB TERM 1584 1302924 - 1302902 - g 76 -11.2 -3.41527 | overlap 1302908 CAACTGGCATTAGAA GCGAAAGGCG AAA CGCCATCCGC AGTGACCCGATTAAG TERM 1585 1302918 - 1302908 - g 72 -8.2 -3.82083 | overlap 1302902 GCATTAGAAGCGAAA GGCG AAA CGCC ATCCGCAGTGACCCG TERM 1586 1304290 - 1304274 - g 72 -7.9 -3.89346 | opp_overlap 1304272 1304283 TTGTGATCTTACAAA GTGGCGG TCG CCGCTAC GCCTTGCTGGTGGAT cheA 1302515 - 1304479 + | chemotaxis protein CheA TERM 1587 1304957 - 1304947 - g 71 -3.2 -4.74706 | opp_overlap 1304955 GTGAACATCGAAAAA CTGC TGA ACAG CGAAGAGATGGCGCT cheW 1304500 - 1305003 + | purine-binding chemotaxis protein TERM 1588 1305032 - 1305052 + F 100 -8.3 -5.67283 | opp_overlap 1305028 1305032 CTCAATTGAAATGAA CCCGATG ATCTGCG CATCGGG TTTTTTATTTCAATT TERM 1589 1305903 - 1305926 + G 73 -9.6 -3.64822 | overlap 1305891 GGGCGACCTGGCGCA GAGCGTTTCA CATA TGCAACGCTC TTTGACTGACACCGT tar 1305148 - 1306809 + | methyl-accepting chemotaxis protein II TERM 1590 1307244 - 1307225 - g 74 -6.4 -4.46757 | overlap 1307216 AAGAGACGGAGAAAA GTTTTGCC CGCT GGCACAAC GATCTCGAACATCAG TERM 1591 1307853 - 1307838 - g 74 -2.4 -5.055 | overlap 1307839 1307840 1307849 GGAACTGGCAAAAAA TGCCGC GACA ACGGCG CAGGCGGGCGGTGTT tap 1306855 - 1308456 + | methyl-accepting protein IV cheR 1308475 - 1309335 + | chemotaxis methyltransferase CheR cheB 1309338 - 1310387 + | chemotaxis-specific methylesterase cheY 1310402 - 1310791 + | chemotaxis regulatory protein CheY TERM 1592 1310871 - 1310893 + G 74 -9.8 -3.53811 | overlap 1310859 GCGCGCATCGGCAGC CTGACGCGTA TGC TGCGCGACAG TTTGCGGGAACTGGG cheZ 1310802 - 1311446 + | chemotaxis regulator CheZ TERM 1593 1311453 - 1311488 + T 82 -13.4 -2.78596 | GGATTTTGATTTGTA TTGCCTGATGTGGCGT GACC ACGTCATATCAGGCGG TCTGATAAGGCGATG TERM 1594 1311731 - 1311705 - T 70 -2.2 -4.9218 | overlap 1311706 CACCGACTAGAAAAA GCGCGGGA AGAGGGGCAAA TCCCGCGT TCCCGTGAACTGACC SSON_1237 1312544 - 1312131 - | hypothetical protein SSON_1238 1312829 - 1313332 + | IS1 ORF SSON_1239 1313927 - 1313343 - | putative transposase TERM 1595 1314536 - 1314520 - g 72 -5 -4.62783 | CAGCCACCTGAAAAA GCTGCG TATGT CGCGGC AGGATATTCGTGATG TERM 1596 1314964 - 1314984 + G 72 -4.6 -4.63218 | ACAACCTACTCATCT TCCGGTGC CGGAA GCCCTGGA TTTTATTAACGAGAA flhB 1314044 - 1315015 + | flagellar biosynthesis protein FlhB TERM 1597 1316574 - 1316599 + T 100 -17.7 -3.83026 | opp_overlap 1316574 GATGGCAATAAAAAA GCCTGATCAGG TAAC CCTGATCAGGC TTTACTCTCACGAAA TERM 1598 1316599 - 1316574 - T 100 -17.7 -5.46657 | opp_overlap 1316574 GATGGCAATAAAAAA GCCTGATCAGG TAAC CCTGATCAGGC TTTACTCTCACGAAA argS 1318357 - 1316621 - | arginyl-tRNA synthetase TERM 1599 1317034 - 1317044 + g 70 -4.6 -4.57569 | overlap 1317040 AGTCGAAGATGTAGT CCGT GGT GCGG TTTTTGGAGAGATCC TERM 1600 1318297 - 1318276 - G 70 -10.1 -3.27298 | overlap 1318272 TTGCTGAATGACGAA CCTGCGGTT CGCA ATCCGCAGG CGCGCCTGCCGCAAT TERM 1601 1318398 - 1318380 - H 77 -11 -3.20382 | CCTTACATTGATGAA GCGAGCAA AAA TTGCCCGC ACCAGTTAAAGAAAT yecM 1318567 - 1319139 + | hypothetical protein cutC 1319153 - 1319899 + | copper homeostasis protein CutC TERM 1602 1319947 - 1319971 + F 100 -10 -5.64274 | TGCTTGCTCGTACCA GGCCCCTG CAATTTCAA CAGGGGCC TTTTTTTATCCCTGA TERM 1603 1320254 - 1320269 + F 72 -5.4 -4.41616 | opp_overlap 1320254 TTAATTATACAATGA TTCCGG TGTT CTGGAA TTTATTTAGAGGAAT yecK 1320287 - 1321387 + | putative cytochrome C-type protein TERM 1604 1321460 - 1321444 - f 72 -9.4 -3.48105 | overlap 1321442 TGAATTTATTAAACA CAGCGG TATTG CCGCTG GAGCGCAGGTGGTGA SSON_1246 1321578 - 1321880 + | IS600 ORF1 SSON_1247 1322021 - 1322734 + | IS600 ORF2 TERM 1605 1323415 - 1323402 - g 74 -2.3 -5.06451 | opp_overlap 1323403 1323404, overlap 1323403 1323404 CATCAGCTGAAAAAA TCTGG CAAA CCAGT GATTGCCATTGATCC bisZ 1322817 - 1325108 + | biotin sulfoxide reductase 2 TERM 1606 1325138 - 1325117 - T 77 -11.5 -3.28745 | opp_overlap 1325115 1325114, overlap 1325119 GGCGTAAGAAGTGAA TAGCGCCCG GAAA CGGGCGCTG AGGTTATGCAAACGT TERM 1607 1325136 - 1325119 - T 86 -14.1 -3.20751 | opp_overlap 1325115 1325114, overlap 1325117 CGTAAGAAGTGAATA GCGCCCG GAAA CGGGCGC TGAGGTTATGCAAAC yecP 1326244 - 1325273 - | putative enzyme yecO 1326984 - 1326241 - | hypothetical protein yecN 1327420 - 1327025 - | hypothetical protein TERM 1608 1327607 - 1327631 + H 70 -10 -3.06418 | opp_overlap 1327607 1327606, overlap 1327603 GTAAAAAAAGATAAG GCGTAGTGGT CTGAT GCCACTGCGC TAATTTCTGTAACCA TERM 1609 1328294 - 1328269 - H 72 -10.5 -2.77899 | opp_overlap 1328268 1328267 GCGCTCTATTAACCA GTCTCATAAGG AAGT CCTTTTGAGAC ACTTTCAACGTAACG SSON_1253 1328407 - 1328958 + | putative resolvase TERM 1610 1329161 - 1329145 - f 88 -8.1 -4.83615 | opp_overlap 1329145 1329144 CATTTTTTATAAAAA TTTTCAG ACT CTGAAAA GTTACTGTACAGAAT TERM 1611 1329223 - 1329209 - f 74 -5.8 -4.60889 | overlap 1329186 AAGTATCTGTAAAAA CTTTTA AGA TAAAAG ATAGATATCCCAGAA TERM 1612 1329378 - 1329389 + F 83 -4.4 -5.38549 | overlap 1329364 GGGGGTTCTGATTAC TGGA GAAC TCCA TTTTTGTTATTTAAG TERM 1613 1330302 - 1330327 + F 79 -9 -4.16943 | opp_overlap 1330302 TATTTTAATCACACA GGCTAATCGG TTTTAT CCGGTTGGCC TTTTCACGTATGAGG TERM 1614 1330747 - 1330706 - f 74 -5.9 -4.70583 | gap 1, overlap 1330709 CTCAGTAAGACAAAA TGACACCACTACCAGTGACA AAA TGTCA-TGGGGGTAGTGACA AAATGTCACCCGTGT SSON_1254 1330868 - 1331242 + | hypothetical protein TERM 1615 1331672 - 1331695 + F 71 -7.6 -3.90744 | gap 1, opp_overlap 1331661 CAAAGCAACCTAAGC TTGC-GAATCT GTG AGATTCAGCAA TTGTTTCAAGAAAGC TERM 1616 1333192 - 1333212 + F 83 -4 -5.30616 | overlap 1333195 GCATAATTTTAATTA TGGGAGAG CAATT CTCTCTTA TTTTTCTTTCAATAA TERM 1617 1333195 - 1333209 + F 74 -5.7 -4.72696 | overlap 1333192 TAATTTTAATTATGG GAGAG CAATT CTCTC TTATTTTTCTTTCAA TERM 1618 1333344 - 1333367 + F 78 -5.2 -4.92239 | ATTATTGAATCCTTT GCCCTTCACA GAAA TGTTTAGGGC TTTTTCAGTTTTTAA SSON_1255 1334146 - 1334448 + | IS600 ORF1 SSON_1256 1334589 - 1335302 + | IS600 ORF2 SSON_1257 1335487 - 1335299 - | hypothetical protein TERM 1619 1335571 - 1335559 - R 83 -4.1 -5.28942 | overlap 1335560 TACCTTAAATAAAAA CCTGA TTA TCAAG CAGATATGCATGGAT TERM 1620 1336124 - 1336103 - R 100 -15.9 -4.3341 | CAAAATCAATATAAA CAGCCCCTC CGGA GAGGGGCTG GAGAGTGGCGCTATG TERM 1621 1337293 - 1337278 - R 95 -7.5 -5.4505 | opp_overlap 1337278 1337291, overlap 1337279 TTCCGCAATAAAAAA CCCGC TCGGCG GCGGG TTGTAGAAACTCTTC TERM 1622 1337289 - 1337279 - R 74 -8.2 -3.86307 | opp_overlap 1337278, overlap 1337278 TCCGCAATAAAAAAC CCGC TCG GCGG CGGGTTGTAGAAACT SSON_1260 1338189 - 1337335 - | antitermination protein Q SSON_1261 1338560 - 1338186 - | putative crossover junction endodeoxyribonuclease SSON_1262 1338817 - 1338560 - | putative bacteriophage protein SSON_1263 1339949 - 1339152 - | IS21 ORF2 SSON_1264 1341121 - 1339949 - | IS21 ORF1 TERM 1623 1340279 - 1340299 + g 77 -9.7 -3.59979 | overlap 1340275 1340283 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 1624 1340283 - 1340295 + g 75 -6.9 -4.44046 | overlap 1340275 1340279 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_1265 1341140 - 1341412 + | IS2 orf1 SSON_1266 1341370 - 1342275 + | insertion element IS2 transposase InsD SSON_1267 1342392 - 1342694 + | IS600 ORF1 SSON_1268 1343360 - 1342857 - | IS1 ORF SSON_1269 1343612 - 1344325 + | IS600 ORF2 SSON_1270 1344353 - 1345306 + | putative phage tail fiber protein SSON_1271 1345257 - 1345880 + | hypothetical protein TERM 1625 1345995 - 1346018 + T 93 -10.2 -4.58395 | opp_overlap 1345992 1345991, overlap 1345997 AAACGGATGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 1626 1345997 - 1346016 + T 100 -15 -3.90762 | opp_overlap 1345992 1345991, overlap 1345995 ACGGATGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_2 1347811 - 1346060 - | invasion plasmid antigen TERM 1627 1348207 - 1348222 + r 72 -6.1 -4.26076 | ATCTTTTTGTCTTCT CACCG TCTGGT CGGTG TTTTGCTGAGACTGC SSON_1273 1348660 - 1348412 - | hypothetical protein yecD 1349581 - 1349015 - | hypothetical protein aspS 1349891 - 1351663 + | aspartyl-tRNA synthetase ntpA 1351781 - 1352233 + | dATP pyrophosphohydrolase yebC 1352262 - 1353002 + | hypothetical protein TERM 1628 1353270 - 1353258 - g 72 -4.7 -4.59773 | overlap 1353259 CTTTATGGCCAAAAA TGCCG ACT CGGCT CTGAAACTGGGGCAG TERM 1629 1353424 - 1353395 - g 86 -7.1 -5.02074 | opp_overlap 1353399 GTAGTGCCGAAAAAA GCCAGGTGCAG CATATGGT CCGCACCTTGC TGAAACTGCCCGCTA ruvC 1353037 - 1353558 + | Holliday junction resolvase TERM 1630 1353566 - 1353591 + T 79 -10.4 -3.61178 | opp_overlap 1353563 TGCGTTAAGTTATAC CGCCTCGGTC AGTTCA GGCTGAGGCG TTTCAACTCCCTCCG yebB 1354162 - 1353560 - | hypothetical protein TERM 1631 1353880 - 1353892 + g 85 -3.4 -5.35721 | GGGAGGGAACCTGTT CAAC AATTC GTTG TTTTTGTTGTTCTGT TERM 1632 1354205 - 1354215 + H 95 -2.6 -6.06723 | opp_overlap 1354205 ATATACGTAATAGCA TAAA AAA TTTA TTTTTTTTTCAGGAG TERM 1633 1354371 - 1354390 + H 93 -6.4 -5.67063 | overlap 1354372 GTTTTCTTCATCCTT CGCTGGAT ATCT ATCCAGCA TTTTTTTATCATACA TERM 1634 1354372 - 1354389 + H 80 -9.9 -3.99153 | overlap 1354371 TTTTCTTCATCCTTC GCTGGAT ATCT ATCCAGC ATTTTTTTATCATAC TERM 1635 1354684 - 1354672 - g 72 -5.5 -4.45151 | AAGAGTTAATCAAAA CCAAC GGC GTCGG CCCGAAGTTGGCGCT TERM 1636 1354808 - 1354798 - g 82 -2.4 -5.42259 | GCATTGGTAAAAAAA CCGC CGA GCGT TTAATTGTCGAAATG ruvA 1354440 - 1355051 + | Holliday junction DNA helicase motor protein ruvB 1355060 - 1356070 + | Holliday junction DNA helicase B znuB 1357002 - 1356217 - | high-affinity zinc transporter membrane component znuC 1357754 - 1356999 - | high-affinity zinc transporter ATPase TERM 1637 1358124 - 1358106 - g 75 -5.3 -4.65895 | GCGTTTATGCAAAAA CCGGTAA GCAAA TTACCAG GAGCGAAGCAGGTAA TERM 1638 1358237 - 1358224 - g 77 -3.1 -5.03715 | overlap 1358225 1358234 ACCACGCGGAAAAAA GTGAC GAAG ATCAC CATCACGGCGATTTC TERM 1639 1358489 - 1358478 - g 72 -4.4 -4.59773 | GGCTATTTCGAAAAA CAGT TCGG ACTG ACACCGCTTGGTCAT znuA 1357833 - 1358765 + | high-affinity zinc transporter periplasmic component TERM 1640 1359402 - 1359386 - g 81 -10.1 -3.87815 | opp_overlap 1359373, overlap 1359400 TGCCAGCGCCAGAAA CGCCGGT TTA ACCAGCG CCGAAGTGAGCGCAG yebA 1358781 - 1360103 + | hypothetical protein TERM 1641 1360120 - 1360142 + F 100 -7 -5.99154 | TAACATCCATTCGCA GCCGGTAC GCAGTCA GTATCGGC TTTTTTTATTTGGTG TERM 1642 1360157 - 1360175 + F 72 -10.2 -2.85351 | CTTTTTTTATTTGGT GCGGGGCA AGT TGCGCCGC TATACTATCACCAGA TERM 1643 1360712 - 1360724 + G 79 -4.7 -4.9755 | opp_overlap 1360712 GCGATGTTCCATAAT CAGGG CAA CCCGG TTTTTGATTATGTCT msbB 1360223 - 1361194 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1644 1361221 - 1361200 - T 100 -13.1 -5.99154 | opp_overlap 1361200 TATCAAATAAAAAAA GCCTCTCAA ATTA TTGAGAGGC TGTACTCGATAAAAA TERM 1645 1361200 - 1361221 + T 82 -13.1 -2.80816 | opp_overlap 1361200 TATCAAATAAAAAAA GCCTCTCAA ATTA TTGAGAGGC TGTACTCGATAAAAA SSON_1287 1362709 - 1361414 - | hypothetical protein TERM 1646 1362228 - 1362251 + g 76 -7.5 -4.23054 | CCTGCATCTTCGTGG TATGCACGG ATCTCA CTGTGCATA TTTTCAGTAATGTAT SSON_1288 1363258 - 1362755 - | IS1 ORF SSON_1289 1365133 - 1363481 - | putative alpha-mannosidase TERM 1647 1363784 - 1363795 + g 71 -2.2 -4.95876 | CACCATAAGCGCATA GGGA CAGA TCTC TTTTTCATTATAGTT TERM 1648 1364164 - 1364185 + g 100 -3.7 -5.61824 | gap 1, opp_overlap 1364154 1364169 AGCAACCTTGTAACT CAAAGCGGCC TGC GGC-GATTTG TTTTTTTAACTTTTC SSON_1290 1367038 - 1365170 - | hypothetical protein TERM 1649 1366037 - 1366057 + g 70 -3.9 -4.65916 | overlap 1366039 CTCAGCATCATCGGC CAGACCAAT ATT AGTGGTCAG TTTTATTAACATAAC TERM 1650 1367117 - 1367084 - R 79 -7.5 -4.51238 | overlap 1367086 1367088 GTTATAAAAGACAAA TAGATTGTGATCGCC TACA GACGATCACAATGAA AGGAAAATATTAACG TERM 1651 1367115 - 1367086 - R 80 -10.1 -3.85066 | overlap 1367084 1367088 TATAAAAGACAAATA GATTGTGATCGCC TACA GACGATCACAATG AAAGGAAAATATTAA TERM 1652 1367113 - 1367088 - R 88 -12.7 -3.48031 | overlap 1367086 1367084 TAAAAGACAAATAGA TTGTGATCGCC TACA GACGATCACAA TGAAAGGAAAATATT SSON_1291 1367366 - 1367127 - | hypothetical protein SSON_1292 1367682 - 1368185 + | IS1 ORF SSON_1293 1368306 - 1369148 + | hypothetical protein TERM 1653 1369200 - 1369175 - T 95 -14.7 -3.53444 | opp_overlap 1369170, overlap 1369177 TTATGTGTTGCTAAA TACCCCGGCCA TCAG CGGCCGGGGCA GGTGAGATTACTCTA TERM 1654 1369198 - 1369177 - T 100 -15.1 -3.34517 | opp_overlap 1369170, overlap 1369175 ATGTGTTGCTAAATA CCCCGGCCA TCAG CGGCCGGGG CAGGTGAGATTACTC pykA 1370650 - 1369208 - | pyruvate kinase TERM 1655 1370312 - 1370323 + g 95 -5.8 -5.38054 | AGGCAGGCCTTTGTA GTCG ATAC CGAC TTTTTCTTTGTCGCC yebK 1371647 - 1370778 - | DNA-binding transcriptional regulator HexR TERM 1656 1371613 - 1371628 + g 81 -4.7 -5.02476 | overlap 1371623 GATTTGCTCAAATGT TCCAG CTGAGA CTGGA TTTTTTCCAGCATAT TERM 1657 1372025 - 1372059 + G 89 -13.6 -3.22388 | overlap 1372029 CCTGTGACCTGGTCA TTTTCGGCGCGAAAGG CGA CCTTGCGCGTCGTAAA TTGCTGCCTTCCCTG TERM 1658 1372029 - 1372055 + G 90 -14.4 -2.57721 | overlap 1372025 TGACCTGGTCATTTT CGGCGCGAAAGG CGA CCTTGCGCGTCG TAAATTGCTGCCTTC zwf 1371985 - 1373460 + | glucose-6-phosphate 1-dehydrogenase TERM 1659 1373540 - 1373565 + F 100 -11.2 -5.80364 | gap 1 TTTTTACACTTTCAG GCCTCGTGCGG ATTCA CC-CACGAGGC TTTTTTTATTACACT TERM 1660 1375482 - 1375465 - g 82 -7.7 -4.56597 | GCCTTGCGTGAAAAA CTGTCCG GTGC CGAACAG GGCGCAACCTGTATC edd 1373695 - 1375506 + | phosphogluconate dehydratase TERM 1661 1375588 - 1375600 + G 71 -9.1 -3.44051 | opp_overlap 1375575 1375574, overlap 1375575 ATCCTGACCACCGGC CCGGT TGT ACCGG TTATCGTGGTAAAAA eda 1375543 - 1376184 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1662 1376214 - 1376194 - T 100 -13.3 -4.4267 | opp_overlap 1376194 1376195, overlap 1376195 CTGTAAAAGTCAAAA CGCCCGATC TAC GATCGGGCA TTTTTGTAGCGTTTT TERM 1663 1376194 - 1376214 + T 100 -11.1 -4.90296 | opp_overlap 1376194 1376195, overlap 1376195 CTGTAAAAGTCAAAA CGCCCGATC TAC GATCGGGCA TTTTTGTAGCGTTTT TERM 1664 1376195 - 1376213 + T 95 -14.6 -3.52551 | opp_overlap 1376194 1376195, overlap 1376194 TGTAAAAGTCAAAAC GCCCGATC TAC GATCGGGC ATTTTTGTAGCGTTT TERM 1665 1376213 - 1376195 - T 90 -14.6 -3.24879 | opp_overlap 1376195 1376194, overlap 1376194 TGTAAAAGTCAAAAC GCCCGATC TAC GATCGGGC ATTTTTGTAGCGTTT purT 1377418 - 1376240 - | phosphoribosylglycinamide formyltransferase 2 yebG 1377552 - 1377842 + | DNA damage-inducible protein YebG TERM 1666 1378082 - 1378070 - g 75 -4.7 -4.73613 | overlap 1378071 TGATTATCAACAAAA TCGCG TGG CGCGT TGGGCAGATGATCAA yebF 1377897 - 1378265 + | hypothetical protein TERM 1667 1378845 - 1378833 - g 74 -3.3 -4.88684 | overlap 1378835 AATACAAAGATAAAA TTCGC GCG GCGCA TCAGGACGAACCGCA yebE 1378592 - 1379251 + | hypothetical protein TERM 1668 1379823 - 1379833 + G 75 -5.4 -4.67982 | opp_overlap 1379815 CCAATAAGCGCGCAG CTCA TAG TGAG TTTTATTCGATGGGC TERM 1669 1380225 - 1380241 + G 71 -2.2 -4.96501 | gap 1, opp_overlap 1380226, overlap 1380226 TGCTGGACGCGGAAA TGGC-CG ATGC CGAGCCG TTTGTTTTTCTGCCG ptrB 1379459 - 1381519 + | protease 2 SSON_1304 1382178 - 1381516 - | exodeoxyribonuclease X TERM 1670 1382139 - 1382153 + g 70 -7.1 -4.1399 | overlap 1382143 TCTCAACGATCCCTC CCTGC AAACC GCAGG TTTCTGTATCGATAA SSON_1305 1382858 - 1382202 - | hypothetical protein holE 1383190 - 1382960 - | DNA polymerase III subunit theta SSON_1307 1383329 - 1383703 + | hypothetical protein TERM 1671 1383726 - 1383736 + G 70 -6.8 -4.02132 | TGGCGTTTACCTGGA TCGC GCT GCGA TTTATCCATTTCACC SSON_1308 1383707 - 1384579 + | putative resistance protein SSON_1309 1384592 - 1384933 + | hypothetical protein TERM 1672 1384970 - 1384999 + T 72 -5.1 -4.70879 | gap 2, opp_overlap 1384970 TTTCCAATAAAAAAA CCGCCTCAGTTCT TTCACC AGAAC-G-GGCGG TTTTTAACATTTAAG TERM 1673 1384999 - 1384970 - T 89 -5.1 -5.7946 | gap 2, opp_overlap 1384970 TTTCCAATAAAAAAA CCGCCTCAGTTCT TTCACC AGAAC-G-GGCGG TTTTTAACATTTAAG TERM 1674 1385161 - 1385187 + T 100 -11 -5.64006 | AGAGCCATTTCCCTG GACCGAATAC AGGAATC GTATTCGGTC TTTTTTTAATTGCAT SSON_1310 1386402 - 1385326 - | putative phage integrase protein TERM 1675 1385552 - 1385566 + g 82 -2.7 -5.31275 | CCATCCGGGTGAATG CTGCC GTCAG GGCTG TTTTTTCTAATCCCG TERM 1676 1386041 - 1386025 - G 72 -6.5 -4.42976 | opp_overlap 1386025, overlap 1386018 CCACAAATCAAGAAA CTCGGCA ATA TGGCGAG TGGTTATTTCTGTCA SSON_1311 1386684 - 1386439 - | IS1 ORF SSON_1312 1387555 - 1386695 - | insertion element IS2 transposase InsD SSON_1313 1387878 - 1387513 - | insertion sequence 2 OrfA protein SSON_1314 1388233 - 1387967 - | IS1 ORF SSON_1315 1388861 - 1389163 + | IS600 ORF1 SSON_1316 1389304 - 1390017 + | IS600 ORF2 TERM 1677 1390068 - 1390091 + T 93 -10.2 -4.58395 | opp_overlap 1390056 1390065 1390064, overlap 1390070 ACACCTCAGAATCCG GGGAGGCCCG GGGG CGGGCCTCTG TTTTTCCGGAGTCAG TERM 1678 1390070 - 1390089 + T 100 -15 -3.90762 | opp_overlap 1390065 1390064, overlap 1390068 ACCTCAGAATCCGGG GAGGCCCG GGGG CGGGCCTC TGTTTTTCCGGAGTC ipaH_3 1391848 - 1390133 - | invasion plasmid antigen SSON_1318 1392763 - 1392050 - | IS600 ORF2 SSON_1319 1393206 - 1392904 - | IS600 ORF1 TERM 1679 1393427 - 1393395 - R 87 -10.6 -4.08919 | AAATCGTAAAGGAAA CCGTAGCACGTCGT ATGCA AGAACGTGCCACGG CTGGCTGATGGATGT SSON_1320 1394547 - 1394044 - | IS1 ORF SSON_1322 1395159 - 1395461 + | IS600 ORF1 SSON_1323 1395602 - 1396315 + | IS600 ORF2 SSON_1324 1396833 - 1396558 - | hypothetical protein TERM 1680 1396636 - 1396625 - G 72 -7.2 -4.21933 | opp_overlap 1396624 TCAATCGGAAAACAA CCGC CATG GCGG ATCCGTTGATCGCTC TERM 1681 1396826 - 1396842 + g 70 -5 -4.44608 | opp_overlap 1396826, overlap 1396823 AACCAGGACAAATAA CCCGCC ATCCC GACGGG TTCTTTTTGGATCAG TERM 1682 1396842 - 1396826 - G 74 -7.9 -4.12857 | opp_overlap 1396826 1396823 AACCAGGACAAATAA CCCGCCA TCC CGACGGG TTCTTTTTGGATCAG SSON_1325 1397264 - 1397767 + | IS1 ORF TERM 1683 1397853 - 1397842 - T 71 -7.2 -4.13767 | TCGTCGATTTCAAAA GCGC CTAT GCGC ACACTGGTTTTCATC yebU 1399430 - 1397985 - | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 1684 1398779 - 1398789 + g 86 -6.8 -5.02074 | TTTCCTGATTGCTTT CTGG TGA CCAG TTTTTTAGCGCATCG TERM 1685 1399497 - 1399472 - R 100 -14.7 -3.9712 | opp_overlap 1399465, overlap 1399473 GCAGTTTAGCATAAA CGCTCCGGCGC AGGC ACGCCGGAGCA GTGGGCATTATTTGG TERM 1686 1399496 - 1399473 - R 93 -16 -2.97951 | opp_overlap 1399465, overlap 1399472 CAGTTTAGCATAAAC GCTCCGGCGC AGGC ACGCCGGAGC AGTGGGCATTATTTG SSON_1327 1402144 - 1399505 - | hypothetical protein SSON_1328 1403390 - 1402107 - | hypothetical protein TERM 1687 1402305 - 1402287 - GH 79 -8.8 -4.08111 | overlap 1402289 TAAAGATATGACAAA CAGGTCGA GCA TCGACCAG CGTCCAATCCAGGTC TERM 1688 1402303 - 1402289 - GH 77 -10 -3.61777 | overlap 1402287 AAGATATGACAAACA GGTCGA GCA TCGACC AGCGTCCAATCCAGG TERM 1689 1403151 - 1403129 - GH 71 -9.8 -3.14125 | overlap 1403127 GCCAGATATGCAACA GCGGTTCGCC CCA GGCAAACGGC ATCAGCAACAGCATG TERM 1690 1403202 - 1403218 + gH 70 -3.6 -4.65895 | opp_overlap 1403177, overlap 1403203 GCGCGTTAGCGACCA GTCGCG CCCGT CGCGAA TTTTTGCCTGACAGC TERM 1691 1403448 - 1403472 + H 72 -6.6 -4.26903 | opp_overlap 1403459 TGATGGGAATGATCT TGAGCATTAA CGCAT TTAATGCTTA TTTTAATAGGCTGGC SSON_1329 1403466 - 1404017 + | hypothetical protein TERM 1692 1404522 - 1404510 - g 70 -6.9 -4.06419 | overlap 1404513 GCTGGTGAGAAAGAA GACGC ACC GCGCC GCGAACGCAAGCCAC proQ 1404114 - 1404812 + | putative solute/DNA competence effector TERM 1693 1405184 - 1405199 + G 77 -8.2 -4.14392 | opp_overlap 1405183 1405182, overlap 1405185 ACGATCTCTACAATC TGGCGC AAAA GCGCCG TTTTGAGCGTTACCA TERM 1694 1405257 - 1405239 - g 74 -8.1 -4.13767 | GTCGGTACTGGAAAA GCCGATG GATTT CACCGGC AACGACACTTATAAC TERM 1695 1406408 - 1406398 - g 72 -8.2 -3.77219 | AGTACGCAACGTAAA GGCG TAA CGCC AGACATCATCATGCC prc 1404832 - 1406880 + | carboxy-terminal protease TERM 1696 1406887 - 1406910 + F 100 -14 -5.00616 | opp_overlap 1406887 GTCAAGTAATATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1697 1406910 - 1406887 - f 90 -14 -3.42147 | opp_overlap 1406887 GTCAAGTAATATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1698 1407032 - 1407042 + F 80 -6.8 -4.65916 | opp_overlap 1407018, overlap 1407008 1407007 1407020 ATACGATGTGGGTAT CGCA TAT TGCG TTTTGTTAAACTGAG htpX 1407072 - 1407953 + | heat shock protein HtpX TERM 1699 1407999 - 1407968 - f 76 -11.7 -2.74026 | opp_overlap 1407974, overlap 1407974 ATATGAAGTAAATAC TAAAAAGCGCGTC CTGATC GACGCGCTTTTTT TATGCCCTGGATCGT TERM 1700 1407974 - 1407993 + F 100 -10.7 -5.626 | opp_overlap 1407968 1407974 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG TERM 1701 1407993 - 1407974 - f 100 -10.7 -4.946 | opp_overlap 1407974, overlap 1407968 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG SSON_1334 1409239 - 1410030 + | putative regulator TERM 1702 1410040 - 1410070 + F 77 -6.9 -4.44046 | opp_overlap 1410040 1410043 TTCTGATGAGAGTAA GAACCTGTCGG AATATCAAA CAGACAGGTTC TTTATTTAGCATGAG SSON_1335 1410571 - 1410714 + | hypothetical protein SSON_1336 1410789 - 1411076 + | hypothetical protein TERM 1703 1411090 - 1411121 + F 71 -9.6 -3.25729 | gap 1, opp_overlap 1411098 AATCCTTCCTCAATC TTGAGTAACCCCGTC GTT GAAGG-GTTACTCAA TTCATCCTGATTATA TERM 1704 1411360 - 1411379 + F 72 -10.8 -2.89285 | opp_overlap 1411358, overlap 1411359 TCTTATTTTAAATTT TCAATCCC TTTG GGGATTGA CTTCTCTTTAGGGTA cspC 1411903 - 1412112 + | cold shock-like protein CspC TERM 1705 1412089 - 1412105 + F 70 -9.5 -2.94747 | opp_overlap 1412080 CAGAAAGGTCCGGCA GCTGTTA ACG TAACAGC TATCTGATCGAATCC TERM 1706 1412161 - 1412179 + F 88 -8.1 -4.85177 | opp_overlap 1412161 CAATCTCGCTATAAA GCCTCGT CGAAT GCGAGGC TTTTTACTATGCTTT TERM 1707 1412179 - 1412161 - f 71 -7.4 -3.86822 | opp_overlap 1412161 CAATCTCGCTATAAA GCCTCG TCGAATG CGAGGC TTTTTACTATGCTTT rrmA 1412278 - 1413087 + | 23S rRNA methyltransferase A SSON_1339 1413704 - 1413084 - | hypothetical protein TERM 1708 1414070 - 1414019 - R 71 -9.8 -3.1577 | gap 1, opp_overlap 1414017 1414021, overlap 1414017 1414059 AGGGAAGAGGTAATA TAGCCTAAGCTATGTCTGAT-TATT AAA AATACACTAAACATAGCTTTGGCTA AATTCATAACTTATT SSON_1340 1414539 - 1414081 - | hypothetical protein TERM 1709 1414559 - 1414578 + r 71 -10.6 -2.62396 | opp_overlap 1414560 CCTCCAGATAAAAAA ACGGGGCC AAAA GGCCCCGG TAGTGTACAACAGTC TERM 1710 1414577 - 1414560 - R 100 -14.1 -5.71712 | opp_overlap 1414559 CTCCAGATAAAAAAA CGGGGCC AAAA GGCCCCG GTAGTGTACAACAGT manZ 1415454 - 1414594 - | mannose-specific PTS system protein IID TERM 1711 1415395 - 1415409 + g 82 -2.8 -5.28778 | opp_overlap 1415396, overlap 1415396 GAAGACGCCACGAAT ATCACT TTG AGTGAG TTTTTTCTCGGTGGT manY 1416258 - 1415458 - | PTS enzyme IIC, mannose-specific manX 1417292 - 1416321 - | PTS enzyme IIAB, mannose-specific TERM 1712 1416859 - 1416884 + g 100 -12.5 -4.58685 | GGAGCCGCTTTTGGT GCTGCGGCAGC GGGT GCTGGCGCGGC TTTTTCAACCGGTTT TERM 1713 1417537 - 1417560 + H 72 -8.2 -3.67588 | opp_overlap 1417541 AAGGTAAATCTTTGC CAAATCAGAG GCGT CTCTGATATG TTTAACTCCCGTTTA TERM 1714 1418919 - 1418930 + G 72 -5.8 -4.35483 | GGCGTGCTGCGTCGT GCTC GCGG GAGC TTTGTTATCGTGACC yoaE 1417755 - 1419305 + | putative transport protein TERM 1715 1419350 - 1419318 - T 83 -13.5 -3.22409 | opp_overlap 1419326 1419346, overlap 1419307 1419313 TAAGCATTAACGTAA CGGCATAATGGGCGT GAT ATGTCCATTATGCCG GGCGGGCGGCGGTTG SSON_1345 1420937 - 1419309 - | hypothetical protein TERM 1716 1419346 - 1419380 + g 100 -14.9 -3.54424 | opp_overlap 1419318 1419313 GTGATATGTCCATTA TGCCGGGCGGGCGGC GGTTG GCTGCCCGCCAGCCA TTTGGGAAAATCACG TERM 1717 1421028 - 1421002 - R 95 -13 -3.88583 | overlap 1421003 GAAAGCGGGTATAAA TTCGCCCATCCG TTG CAGATGGGCGAG TAAGAAGTATTAGTC TERM 1718 1421027 - 1421003 - R 100 -16.5 -2.92668 | overlap 1421002 AAAGCGGGTATAAAT TCGCCCATCCG TTG CAGATGGGCGA GTAAGAAGTATTAGT sdaA 1422402 - 1421038 - | L-serine deaminase yeaB 1423164 - 1422586 - | hypothetical protein pabB 1424529 - 1423168 - | p-aminobenzoate synthetase, component I TERM 1719 1423459 - 1423448 - G 72 -5.8 -4.3129 | opp_overlap 1423439 1423436, overlap 1423449 GAGCCACCAGGAAAA GCTG CGCG CAGC AGATCGCTGGCGTGT TERM 1720 1423764 - 1423753 - G 70 -3.6 -4.63952 | ATCACAAAGAATAAA CCGC TCTG GCGA AAGGCTTAAAATTGC TERM 1721 1423815 - 1423802 - G 83 -5.2 -5.1615 | TCAAGACGTAAAAAA GCGC TAAATG GCGC GCGGTTGGCCTGATT TERM 1722 1424423 - 1424395 - G 72 -8.1 -3.98159 | overlap 1424396 GACCACAATATCAAA GCGGCTATACGGA TGA TCGGCATAGCCGG AGTGTAAAAGCATCG TERM 1723 1424422 - 1424396 - G 75 -11.6 -2.98173 | overlap 1424395 ACCACAATATCAAAG CGGCTATACGGA TGA TCGGCATAGCCG GAGTGTAAAAGCATC SSON_1349 1424603 - 1424782 + | hypothetical protein TERM 1724 1424872 - 1424842 - T 100 -11.3 -4.84359 | opp_overlap 1424839 1424836 TGATTGTGAGAAAAA GGACGCTTTTTAT ATGTG ATTAAAAGCGTCC TGATCCATTTATGCT SSON_1350 1425201 - 1424902 - | hypothetical protein SSON_1351 1425777 - 1425274 - | IS1 ORF TERM 1725 1426327 - 1426353 + r 71 -9.5 -3.25668 | overlap 1426326 GTAATATCTTATTCT CTGGTCGATTT ATGTA AAACCGACCAG TATTATCGATAAATT SSON_1352 1426791 - 1426399 - | hypothetical protein TERM 1726 1428263 - 1428274 + G 72 -4.4 -4.64846 | opp_overlap 1428263 GATCATCGAAGCTAA CAAC GGTC GTTG TTTTATGCTTTGTAC yoaA 1426875 - 1428785 + | putative enzyme TERM 1727 1428867 - 1428889 + G 82 -13.5 -2.87132 | overlap 1428867 1428883 CTGGCTATCGATACC GCGACAGAG GTCTG CTCTGTCGC TCTGTGGAACGACGG yeaZ 1428843 - 1429538 + | hypothetical protein SSON_1355 1429578 - 1430159 + | putative outer membrane protein TERM 1728 1430205 - 1430181 - f 100 -14.4 -5.27335 | opp_overlap 1430181 1430185 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCGTTCATACGGCA TERM 1729 1430181 - 1430205 + F 86 -14.4 -2.56596 | opp_overlap 1430181, overlap 1430185 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCGTTCATACGGCA TERM 1730 1430185 - 1430201 + F 77 -9.4 -3.98826 | opp_overlap 1430181, overlap 1430181 TTAAAGAAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCGTTCATAC TERM 1731 1431319 - 1431331 + G 72 -7.7 -3.91144 | opp_overlap 1431318 1431315, overlap 1431322 1431323 TGAACAATAAAGAGT TCCAG CAG CTGGA TTTCTCCAGTCTGCA fadD 1430364 - 1432049 + | long-chain-fatty-acid--CoA ligase TERM 1732 1432070 - 1432086 + F 100 -10.8 -5.75342 | opp_overlap 1432061, overlap 1432059 AAGTCAGTCGTCAGA CGCCGG TTAAT CCGGCG TTTTTTTTGACGCCC rnd 1432119 - 1433246 + | ribonuclease D TERM 1733 1433299 - 1433249 - T 95 -12.5 -4.26344 | opp_overlap 1433258 ATATCCGCAGTAAAA TCTTCCGAAGCCGGACTGGGCGC GCTCA GCGCCACATCCGGCTTTGGCAAA CTACAAATCCAACAC TERM 1734 1433258 - 1433290 + T 86 -12.1 -3.54424 | opp_overlap 1433249 GTAAAATCTTCCGAA GCCGGACTG-GGCGC GCTCA GCGCCACA-TCCGGC TTTGGCAAACTACAA yeaX 1434265 - 1433300 - | putative diogenase beta subunit TERM 1735 1434021 - 1434011 - G 88 -8.2 -4.65895 | opp_overlap 1434018 1434018 CTGCTGATGCAAAAA GCGG GAA CCGC CGCGCGAGTTTTCCT TERM 1736 1434300 - 1434285 - R 73 -4.6 -4.7373 | opp_overlap 1434290 1434291, overlap 1434288 1434289 GTACTCCATCAAAAA TCAGCC CAGC GGCGGA AAATACCGCCGCCGA yeaW 1435445 - 1434321 - | hypothetical protein yeaV 1436922 - 1435477 - | putative transporter TERM 1737 1436972 - 1436988 + r 79 -10.1 -3.78934 | AAAGTGTATATTGTG TTGGCCG CGT CGGCCGA TTGTTGTGGGAAAAG TERM 1738 1437316 - 1437300 - R 100 -13.7 -5.87996 | GAACGAATAAAAAAA CCGCGTC AGT GACGCGG TTCAAATAAACTGGT yeaU 1438423 - 1437338 - | putative tartrate dehydrogenase TERM 1739 1438528 - 1438518 - g 71 -3.2 -4.78848 | TGGTGAAACATAAAA CACG AAT CATG AATAATTTACCGCTG yeaT 1438505 - 1439449 + | putative transcriptional regulator LYSR-type TERM 1740 1439476 - 1439491 + F 74 -5.4 -4.64846 | ATTATCGGGTTGATA TCGGGT TAAA ACCTGA TTTTCTCCTTTCTAA TERM 1741 1439616 - 1439627 + G 79 -2.2 -5.29716 | ATTACTGGACCTATC TGGT TGGG GCCA TTTTTATTGTGTTGG TERM 1742 1439902 - 1439921 + G 72 -5.7 -4.56775 | gap 1, overlap 1439905 CGAGGCCAAATCCGA TGAGCCCC AATAC GGGGC-CA TTTTTAAACGCGCGT yeaS 1439576 - 1440214 + | leucine export protein LeuE yeaR 1440387 - 1440746 + | hypothetical protein yoaG 1440750 - 1440932 + | hypothetical protein yeaQ 1441080 - 1441328 + | hypothetical protein TERM 1743 1441340 - 1441370 + T 78 -4.8 -5.03314 | gap 1, opp_overlap 1441346, overlap 1441341 1441342 1441346 TTAACGCTTAAATTG CA-CAAAGGCTGC ACACAG GCAGCCTTTGCTA TTTTTTAGAGGTGAC TERM 1744 1441341 - 1441368 + T 83 -9.9 -4.14633 | opp_overlap 1441346, overlap 1441340 1441342 1441346 TAACGCTTAAATTGC ACAAAGGCTGC ACACAG GCAGCCTTTGC TATTTTTTAGAGGTG TERM 1745 1441342 - 1441367 + T 82 -13.4 -3.08056 | opp_overlap 1441346, overlap 1441341 1441340 1441346 AACGCTTAAATTGCA CAAAGGCTGC ACACAG GCAGCCTTTG CTATTTTTTAGAGGT TERM 1746 1441363 - 1441346 - T 74 -8.4 -3.95219 | opp_overlap 1441342 1441341 1441340 1441346 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG TERM 1747 1441346 - 1441363 + T 76 -8.4 -4.18668 | opp_overlap 1441346, overlap 1441342 1441341 1441340 CTTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTTTAG yeaP 1442749 - 1441595 - | hypothetical protein yoaF 1442803 - 1443057 + | hypothetical protein yeaO 1443447 - 1443079 - | hypothetical protein TERM 1748 1443106 - 1443130 + g 86 -6.5 -5.1675 | gap 1 TAGCCAGTCGGCCAG CACCAGCGCA TGGTTC TGCG-TGGTG TTTTTTGCTGCGTAG yeaN 1444662 - 1443481 - | putative amino acid/amine transport protein TERM 1749 1444948 - 1444960 + G 73 -9.1 -3.64703 | TTATGGATGGTGCCG CCGCA ATA TGCGG TTTGGATACCGGGCG TERM 1750 1445518 - 1445497 - g 93 -11.5 -4.1711 | opp_overlap 1445495, overlap 1445472 1445471 ACTATGTTTAAGAAA GGCCTGGGG CAAA CGCCAGGCC GATATATTGCGGGAT yeaM 1444759 - 1445580 + | putative ARAC-type regulatory protein yeaL 1445983 - 1445537 - | hypothetical protein SSON_1373 1446105 - 1446257 + | hypothetical protein yeaK 1446761 - 1446258 - | hypothetical protein TERM 1751 1446650 - 1446625 - G 78 -10.5 -3.53012 | gap 1, opp_overlap 1446620 GCTCCCTGGCCTAAA GCGGTGCCACGA ATT TC-TGACACCGC TTCACATTTACCTAC yeaJ 1448243 - 1446804 - | hypothetical protein SSON_1376 1448789 - 1448286 - | IS1 ORF TERM 1752 1449233 - 1449215 - R 79 -8.1 -4.20106 | AAATTGTATGCAAAA GCCACGC AAAAA GCATGGC TCTGAATATTTTTGC yeaI 1450726 - 1449251 - | hypothetical protein TERM 1753 1449287 - 1449307 + g 74 -7.5 -4.13872 | TTTGTTGCCCCCCTC GCTTTTCGC TTC GCGTAAGGC TTTATCTGCTTCCGT TERM 1754 1449988 - 1449977 - G 71 -2.2 -4.94672 | AAAGAACAGTAAAAA TGCC CACA GACA AACCAATATTTTTGT TERM 1755 1450136 - 1450146 + g 100 -2.4 -5.97979 | opp_overlap 1450136 AATCAGCGCCAGCAA CAGG ATT CCCG TTTTTTTCTTATTGT TERM 1756 1450867 - 1450841 - R 100 -11.6 -4.76892 | opp_overlap 1450839 1450838 1450834 1450841, overlap 1450833 ACAGTAAGCTAAAAA TCAGCCAGGCGA TAA TGACCTGGCTGA TAGTTTTAGTCTTTA TERM 1757 1450841 - 1450867 + r 71 -9.5 -3.19995 | gap 1, opp_overlap 1450833 1450841, overlap 1450839 1450838 1450834 ACAGTAAGCTAAAAA TCAGCCAGG-CG ATAA TGACCTGGCTGA TAGTTTTAGTCTTTA yeaH 1452156 - 1450873 - | hypothetical protein yeaG 1454203 - 1452269 - | hypothetical protein TERM 1758 1452379 - 1452390 + g 70 -5.8 -4.19238 | CGTGTTTCTTCTGCT CGTC GGTT GACG TTTTGGCGTTAAACG TERM 1759 1453240 - 1453253 + g 72 -4.5 -4.72127 | CGATGTAAACACGGT CGAGG AAGG CTTCG TTGTTTTTGTTATTA yeaF 1454639 - 1455385 + | hypothetical protein TERM 1760 1455437 - 1455421 - f 100 -13.7 -4.82901 | opp_overlap 1455421 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG TERM 1761 1455421 - 1455437 + F 100 -13.7 -4.2803 | opp_overlap 1455421 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG SSON_1381 1455475 - 1456329 + | putative an aldehyde reductase yeaD 1457285 - 1456380 - | hypothetical protein TERM 1762 1457321 - 1457350 + r 89 -9.3 -4.59109 | overlap 1457323 GCGACCGAAGTCGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1763 1457323 - 1457348 + r 100 -16.3 -3.90762 | overlap 1457321 GACCGAAGTCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_1383 1458678 - 1457332 - | IS4 orf TERM 1764 1458693 - 1458668 - G 100 -9.8 -5.61596 | opp_overlap 1458668 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1765 1458668 - 1458693 + g 73 -9.1 -3.61398 | opp_overlap 1458668 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC gapA 1459781 - 1458786 - | glyceraldehyde-3-phosphate dehydrogenase A TERM 1766 1459853 - 1459837 - H 72 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT yeaA 1460123 - 1460536 + | methionine sulfoxide reductase B SSON_1386 1460533 - 1460850 + | hypothetical protein ydjB 1461652 - 1461011 - | nicotinamidase/pyrazinamidase ansA 1462679 - 1461663 - | cytoplasmic asparaginase I TERM 1767 1461900 - 1461926 + g 73 -3.7 -4.77173 | overlap 1461902 AATACCGCGATCGCT GGCTTCTTGTA ATTCC TGCAGGAAGGC TTTGTTTTGTGGCGC TERM 1768 1462836 - 1462807 - R 100 -9.4 -5.08824 | gap 1, overlap 1462810 1462811 CGTCGACGTAAAAAA TAATGTGGCCGAC GATCT GTCGGCCAC-TCA GTACAAGACTTAACG TERM 1769 1462834 - 1462810 - R 95 -11.4 -4.64763 | overlap 1462807 1462811 CGACGTAAAAAATAA TGTGGCCGAC GATCT GTCGGCCACT CAGTACAAGACTTAA TERM 1770 1462833 - 1462811 - R 93 -14.9 -3.37773 | overlap 1462810 1462807 GACGTAAAAAATAAT GTGGCCGAC GATCT GTCGGCCAC TCAGTACAAGACTTA sppA 1464702 - 1462846 - | protease 4 TERM 1771 1464692 - 1464673 - G 77 -2.8 -5.08824 | overlap 1464675 CGTCCATTTAAAAAA TCCGGCAA TAAA TCGCCAAA GGGTTCGCATGTATT ydjA 1464863 - 1465414 + | hypothetical protein selD 1465531 - 1466574 + | selenophosphate synthetase TERM 1772 1467002 - 1466953 - g 77 -8.5 -4.13945 | gap 1, opp_overlap 1466959 1466998 1467000, overlap 1466954 1466986 ACTGGCACCGGAAAA GCGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCGG TTGAGCGGGCGCTCG TERM 1773 1467001 - 1466954 - g 75 -12 -3.08046 | gap 1, opp_overlap 1466959 1466998 1467000, overlap 1466953 1466986 CTGGCACCGGAAAAG CGCCAGCAGGTGCAGCGTTGCTT GAT AAACGAC-CTGAACCCGCAGGCG GTTGAGCGGGCGCTC TERM 1774 1466998 - 1467023 + G 83 -13.3 -3.05596 | opp_overlap 1466954 1466953 1466986, overlap 1467000 CGACCTGAACCCGCA GGCGGTTGAGC GGGC GCTCGACCGTC TTCGGTCCAACAGTG TERM 1775 1467000 - 1467021 + G 79 -12.3 -3.08679 | opp_overlap 1466954 1466953 1466986, overlap 1466998 ACCTGAACCCGCAGG CGGTTGAGC GGGC GCTCGACCG TCTTCGGTCCAACAG topB 1466579 - 1468540 + | DNA topoisomerase III SSON_1393 1469091 - 1468588 - | IS1 ORF TERM 1776 1469358 - 1469388 + r 100 -7 -5.81412 | opp_overlap 1469358 AGTCATATTCTGAAA TATCCAGCGGAT CAAGAAA ATTCGTTGGATA TTTTTTTTGCATGGA TERM 1777 1469468 - 1469454 - R 77 -3.6 -5.16237 | AATGTGATGAAAAAA GTTTTA TTA CAAAAC CATCCTGGGAGCGAG gdhA 1471944 - 1470601 - | glutamate dehydrogenase TERM 1778 1471869 - 1471897 + g 70 -6.7 -4.12902 | gap 1 CTTCACGAACGGCTT GCGCGAACTCGG TTTGAT TCGGGT-CGCGC TTTTGGACATGGTTG TERM 1779 1472304 - 1472327 + G 93 -12.4 -3.87815 | overlap 1472294 CAGGCGGGCAGTCAG CGCAGCCCTG TACT CAGTGCTGCG TTTATCAGGATCAAA SSON_1396 1472180 - 1472452 + | hypothetical protein SSON_1397 1472825 - 1472418 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase TERM 1780 1473066 - 1473083 + H 74 -5.5 -4.63218 | CGCTGGGCTGGTATC TGGCGGC GCTA GTCGTCA TTTTGTTGAACAGGC SSON_1399 1473432 - 1473935 + | IS1 ORF TERM 1781 1474279 - 1474305 + T 90 -15.2 -2.75803 | GTGTGGAGTGGGTAT CTGACGCTGAAG TCG CTCCAGCGTCAG TAATTGCAATGTTAT SSON_1400 1475639 - 1474317 - | putative thiosulfate sulfur transferase TERM 1782 1474344 - 1474359 + g 81 -4.6 -5.09895 | overlap 1474345 GTCCGGGCCGCGTTC ACCGGT TGCT ACCGGA TTTTTTGGATCGCTG TERM 1783 1474958 - 1474973 + g 70 -6.8 -4.08767 | opp_overlap 1474946 1474949 GAATGACCGTGGTGT CATGGC GAAT GCCGTG TTTTGCCAGCATCGC TERM 1784 1475190 - 1475210 + g 75 -4.5 -4.82901 | opp_overlap 1475192, overlap 1475192 CCATTGCGGATAAAC CAGCTGCTC AAA GTGCGGCAG TTTTTGTAGACGGGA SSON_1401 1476344 - 1475691 - | putative ATP-binding component of a transport system TERM 1785 1477158 - 1477169 + r 74 -7.2 -4.22748 | CATCAGCAGCAGACT GGCG AGTG CGCC TTTCGTTTGTTGATC TERM 1786 1477392 - 1477406 + r 74 -5.6 -4.67353 | opp_overlap 1477391, overlap 1477394 ATCCAGCACAATGAC CTGCTG CAA CAGCCG TTTTTCGCTCAATAC SSON_1403 1479019 - 1477853 - | hypothetical protein TERM 1787 1477970 - 1477984 + g 81 -7.1 -4.59773 | TTGCAATATTTCGCG CTGCC CGTCA GGCAG TTTTTGCGGATCGAG TERM 1788 1478181 - 1478193 + g 95 -9.1 -5.14965 | opp_overlap 1478181, overlap 1478172 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1789 1478193 - 1478181 - G 71 -9.1 -3.53012 | opp_overlap 1478172 1478181 CTGCTTGCCGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1790 1478660 - 1478613 - G 72 -4.9 -4.65895 | gap 2, opp_overlap 1478648 GTCGGCACTGAAAAA TCTTCCCGCACCGGCAGCTGTGT GTCG ACATAGC-GCCAGTT-GGGCAGA GTCTCCGCCCAGCCC ynjA 1479577 - 1479029 - | hypothetical protein ydjZ 1480284 - 1479577 - | hypothetical protein TERM 1791 1479963 - 1479946 - G 88 -5.5 -5.24129 | gap 1, overlap 1479949 1479951 TCTGGCGATAAAAAA GCACAGCG CCG CGCCG-GC CATCGAACTGGTCCA TERM 1792 1480210 - 1480180 - G 86 -11.1 -3.91897 | overlap 1480200 GCTGCGATTGATAAA CTCATGGACGCCG GGAAG CAGCGCCCATGCG AGCAGCATAGCGAAC ydjY 1481138 - 1480299 - | hypothetical protein TERM 1793 1480455 - 1480465 + gr 71 -2.4 -4.92791 | GCTATCCAGACACAC CAGG CAA CCCG TTTTCTTCTCTTCTG ydjX 1481739 - 1480981 - | hypothetical protein xthA 1482664 - 1481858 - | exonuclease III TERM 1794 1482442 - 1482428 - G 73 -9.2 -3.57144 | opp_overlap 1482431 1482433 GTCGTCACCGGGAAA GCCGCG ACG CACGGC AATCGGCGTCTCTTT TERM 1795 1482806 - 1482824 + H 74 -11 -2.92792 | overlap 1482803 CGCTTTTGGTGCGCG CTGCGTCA GAA TGGCGCAG TAATTTCCAGTAAAT cstC 1483110 - 1484330 + | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 1796 1484683 - 1484701 + G 79 -10.2 -3.85698 | opp_overlap 1484676 CGATCACACCGGCAG CAGCGAGC TGT GCACGCTG TTTCTCGACCCGGAC TERM 1797 1485038 - 1485021 - g 77 -9.8 -3.5944 | AGGTACATCCGCAAA CCGCGC CTGCCC GCGCGG TGCTGGAGAAAGAAG TERM 1798 1485227 - 1485264 + G 70 -6.1 -4.19735 | gap 1, opp_overlap 1485218 AATTATCACCATTTC CGCGTGG-TGCTGGCGCG TAC CGATCCGGCAACCGAGCG TTTGATTTTAACCGC SSON_1410 1484327 - 1485361 + | arginine succinyltransferase TERM 1799 1485751 - 1485777 + F 95 -14.4 -3.56821 | opp_overlap 1485725 GCGGCGAGCCTGCGA CATCGCCCGCAC GGC GTGCTGGCGGTG TTTGGGCCGTATAAT TERM 1800 1487565 - 1487546 - g 72 -7 -4.25104 | opp_overlap 1487546 1487546 TTTCGCCCAGCAAAA CCCGGACG TTAT CGACCAGG GTGTTTTTCATAATG TERM 1801 1487981 - 1487961 - g 70 -6.8 -4.06864 | TTGACAGAAGAAGAA CGCCGG GCGGTGAAT CCGGCG GTGATGATGAACGAT SSON_1412 1486833 - 1488176 + | succinylarginine dihydrolase TERM 1802 1488221 - 1488208 - g 81 -4.5 -5.055 | opp_overlap 1488197, overlap 1488209 TTAACGGGTAAAAAA CCGGT TATC ACCGA GCGAGAAATCAACGG ydjS 1488169 - 1489137 + | succinylglutamate desuccinylase TERM 1803 1489179 - 1489130 - f 74 -3.5 -5.03145 | opp_overlap 1489133 1489142, overlap 1489133 1489138 1489140 1489141 TAATGCTCGAAAAAA TAAGCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGCTTT CTTATAAATTAATAC TERM 1804 1489176 - 1489133 - f 72 -5.2 -4.61482 | opp_overlap 1489133 1489142, overlap 1489130 1489138 1489140 1489141 TGCTCGAAAAAATAA GCTAATACTTACCCGCAGAA ATCA TTCTGCGGGTATTAAGTTGC TTTCTTATAAATTAA TERM 1805 1489168 - 1489141 - f 78 -12.8 -2.53642 | opp_overlap 1489133 1489142, overlap 1489140 1489138 1489133 1489130 AAAATAAGCTAATAC TTACCCGCAGAA ATCA TTCTGCGGGTAT TAAGTTGCTTTCTTA TERM 1806 1489142 - 1489167 + F 100 -16.3 -3.2827 | opp_overlap 1489141 1489140 1489138 1489133 1489130, overlap 1489133 AAATAAGCTAATACT TACCCGCAGAA ATCA TTCTGCGGGTA TTAAGTTGCTTTCTT spy 1489467 - 1489928 + | periplasmic protein SSON_1415 1490173 - 1490676 + | IS1 ORF TERM 1807 1490805 - 1490751 - f 86 -12.1 -3.52779 | opp_overlap 1490753, overlap 1490753 AGCCAAAAAACTTAA GACCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGGTT TTCTTTTCTCTTCTC TERM 1808 1490803 - 1490753 - f 93 -14.7 -3.3244 | opp_overlap 1490753, overlap 1490751 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC TERM 1809 1490753 - 1490803 + F 100 -19.8 -5.26907 | opp_overlap 1490751 1490753 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTTG CAG TAATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC SSON_1416 1490869 - 1491507 + | hypothetical protein SSON_1417 1492354 - 1491467 - | nucleotide excision repair endonuclease TERM 1810 1492014 - 1492030 + g 70 -6.5 -4.15044 | AGGGCACAGAGCTGG CGATTGC GGC GCAACCG TTTATTAAACAGCGG TERM 1811 1492512 - 1492553 + r 84 -8.7 -4.56597 | opp_overlap 1492518 1492519, overlap 1492515 1492519 ATAGTTTTGTAGGTC GAATAAGGCGTTCACGCCG CATC CGGCGTGAACAAATTACTC TTTTTCGCACAAACC TERM 1812 1492546 - 1492519 - R 77 -12 -2.77895 | opp_overlap 1492515 1492512 1492519, overlap 1492518 TGTAGGTCGAATAAG GCGTTCACGCCG CATC CGGCGTGAACAA ATTACTCTTTTTCGC nadE 1493411 - 1492584 - | NAD synthetase TERM 1813 1492670 - 1492686 + g 71 -3 -4.74103 | gap 1 TCTCTATTGTTCTGG CG-ACCT GTTC AGGTACG TTTTTCCCTTCCAGA TERM 1814 1493373 - 1493385 + g 72 -4.7 -4.69324 | overlap 1493374 ATTAATCTGCGGTTT TGCGC CCA GCGCC TTTATTATTTGTTGT osmE 1493613 - 1493951 + | DNA-binding transcriptional activator OsmE TERM 1815 1493986 - 1494001 + F 100 -7.5 -5.78622 | opp_overlap 1493986 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTTGGCCTGA TERM 1816 1494001 - 1493986 - f 71 -7.5 -3.8646 | opp_overlap 1493986 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTTGGCCTGA celA 1494250 - 1494570 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB TERM 1817 1494616 - 1494635 + F 82 -7.9 -4.62904 | opp_overlap 1494614 1494610 1494616 TTTCATAAATCAATA CCGCAAT ATTTAA ATTGCGG TTTTTAAGGGTATTT celB 1494655 - 1496013 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC celC 1496064 - 1496414 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 1818 1496531 - 1496519 - g 71 -3.4 -4.79352 | TTATCTATAACAAAA CTGA GAGTA TCAG CGGGCTGCATCAGCA TERM 1819 1496688 - 1496718 + G 79 -4.7 -5.00884 | TGAGTTTGGTGCCAC GCGTATATTGAAC GTTGG GATCAGTAAACGC TTTTTTGAGCAGCAT celD 1496422 - 1497264 + | DNA-binding transcriptional regulator ChbR celF 1497369 - 1498721 + | cryptic phospho-beta-glucosidase ydjC 1498734 - 1499492 + | hypothetical protein TERM 1820 1499752 - 1499717 - T 93 -11.8 -3.68529 | opp_overlap 1499743, overlap 1499720 AGCGCACTATGTAAA TCATTTGAGGCGGCGC AATT GCGCCGCCTCCCATCA GGCAGGAATTTTGTC TERM 1821 1499749 - 1499720 - T 82 -13.5 -2.95116 | opp_overlap 1499743, overlap 1499717 GCACTATGTAAATCA TTTGAGGCGGCGC AATT GCGCCGCCTCCCA TCAGGCAGGAATTTT katE 1502011 - 1499750 - | hydroperoxidase II TERM 1822 1500592 - 1500570 - G 76 -7.6 -4.22652 | opp_overlap 1500568 1500570 1500586 TGATATGATTCAAAA CCGCCGCG TTTCGGT CCCGGCGG TGTTTCGCGCGGCCA SSON_1427 1502194 - 1502457 + | cell division modulator TERM 1823 1503542 - 1503512 - T 90 -10.4 -4.33653 | CATTTAAAAAGTAAA GCAACGGCCCCTAT ACA AAACGGACCGTTGC CAGCATAAGAATTAA SSON_1428 1504945 - 1503554 - | kinase fragment TERM 1824 1504386 - 1504372 - G 70 -3.6 -4.59853 | GGAATGCGGCAAAAA TTACCA CGC TGATAA TTGACGTCGGATTGG SSON_1429 1505668 - 1505078 - | hypothetical protein TERM 1825 1505660 - 1505645 - G 73 -4 -4.74767 | gap 1, overlap 1505647 ACAAGCAATAGAAAA GAGAAGG TGA CCTTC-C GCCGTCATGATAAAA TERM 1826 1505659 - 1505647 - G 72 -7.7 -3.97283 | overlap 1505645 AAGCAATAGAAAAGA GAAGG TGA CCTTC CGCCGTCATGATAAA TERM 1827 1505800 - 1505827 + r 95 -17 -2.70932 | opp_overlap 1505800 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG TERM 1828 1505827 - 1505800 - R 100 -19.2 -4.16301 | opp_overlap 1505800 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG yniC 1506499 - 1505831 - | 2-deoxyglucose-6-phosphatase TERM 1829 1506831 - 1506842 + G 90 -7.2 -5.15381 | GATCGATATGATGCA GGCG AATA CGCC TTTTTTGAATCTGTT TERM 1830 1506908 - 1506928 + G 81 -6.1 -4.84359 | overlap 1506911 GCGTGAACGTTATGT TCTGGGTGA TTT TCATCCTGA TTTTTGTCGGACTGG SSON_1431 1506646 - 1507182 + | hypothetical protein TERM 1831 1507189 - 1507205 + T 71 -10.8 -2.64099 | opp_overlap 1507189, overlap 1507188 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA TERM 1832 1507205 - 1507189 - T 93 -10.8 -4.43477 | opp_overlap 1507189 1507188 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA SSON_1432 1508083 - 1507223 - | hypothetical protein TERM 1833 1507787 - 1507775 - G 90 -9.1 -4.48713 | CTGACCAAGAATAAA TGCGC TAT GCGCA TCCAGCGGACGAGGT SSON_1433 1508479 - 1508189 - | hypothetical protein TERM 1834 1508550 - 1508573 + r 100 -9.6 -5.06414 | overlap 1508552 CGACAGGTTGGTGGT GATTCCCCCA ATGC TGGGGGAATG TTTTTGTTAGCGGGA TERM 1835 1508552 - 1508571 + r 95 -12.2 -4.16307 | overlap 1508550 ACAGGTTGGTGGTGA TTCCCCCA ATGC TGGGGGAA TGTTTTTGTTAGCGG pfkB 1509509 - 1508580 - | 6-phosphofructokinase 2 TERM 1836 1509752 - 1509768 + H 100 -6.5 -5.88565 | CTTAAGAAAGTTTCC GGGACCG CGA TGGTCTC TTTTTTTGTTGTACG TERM 1837 1509929 - 1509919 - g 83 -5.4 -5.03314 | opp_overlap 1509919 GCCAGCGCTAAAAAA CCTT TCG AAGG TAATCTGAACGCAGG TERM 1838 1510316 - 1510304 - g 73 -9.1 -3.67141 | opp_overlap 1510309, overlap 1510308 ACAATGCCAGTGAAA CCCAG CCG CTGGG CTATGCCTCCGGGGC SSON_1435 1509796 - 1510554 + | hypothetical protein TERM 1839 1510561 - 1510589 + T 79 -10.9 -3.38317 | opp_overlap 1510560, overlap 1510559 1510563 AGCATGTAAAATTAT CTGCCGGACCGTG TTA TGCGGTCTGGCTG TCTTCGTTTGTCACT TERM 1840 1510563 - 1510587 + T 79 -12.1 -3.25317 | opp_overlap 1510560, overlap 1510561 1510559 CATGTAAAATTATCT GCCGGACCGTG TTA TGCGGTCTGGC TGTCTTCGTTTGTCA SSON_1436 1510825 - 1510607 - | hypothetical protein TERM 1841 1511680 - 1511692 + H 72 -9.1 -3.62522 | ATAAGCTATTGAGTC TGGCC TGT GGCCA TTATTAACAACATTG SSON_1437 1512504 - 1513007 + | IS1 ORF TERM 1842 1514815 - 1514801 - g 73 -9.2 -3.61715 | CAGCGCCTGGAAGAA GCCGCG AAA CGCGAC CACCGTAAAATCGGT TERM 1843 1515016 - 1515006 - g 71 -2.4 -5.00616 | TCCTGTGGGAAAAAA CCGG TCA CTGG GACAACTACAAAGAT TERM 1844 1515685 - 1515710 + G 72 -8.9 -3.8512 | overlap 1515687 ATTCGCTGGTTTCTT CCCGACCTGGC TTGC GCCAGTTCAGG TTGTTATCATGAATA thrS 1514087 - 1516015 + | threonyl-tRNA synthetase TERM 1845 1516419 - 1516395 - g 72 -6.4 -4.39571 | gap 1 GTGATAAAGCCAAAA TCACG-CTGCG TTTC CGCGGTCGTGA GATGGCGCACCAGCA infC 1516127 - 1516561 + | translation initiation factor IF-3 TERM 1846 1516579 - 1516606 + F 100 -14.2 -4.23707 | opp_overlap 1516574, overlap 1516600 CCTTCAAGTAGCACT GTCTGTGGAGCC TTCG GGCTTCACAGGC TTTGTTCGCCTTTGT rpmI 1516658 - 1516855 + | 50S ribosomal protein L35 rplT 1516908 - 1517264 + | 50S ribosomal protein L20 TERM 1847 1517276 - 1517294 + F 93 -10.3 -4.54727 | opp_overlap 1517276 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1848 1517294 - 1517276 - f 79 -10.3 -3.62418 | opp_overlap 1517276 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC SSON_1443 1517387 - 1517431 + | hypothetical protein TERM 1849 1517481 - 1517496 + F 100 -10.4 -5.71712 | opp_overlap 1517481 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1850 1517496 - 1517481 - f 79 -10.4 -3.55815 | opp_overlap 1517481 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1851 1517543 - 1517529 - f 82 -2.7 -5.61881 | TTTGAAAAATAAAAA GCCAG TCTAT CAGGC GTAATTGTCGCAGCC TERM 1852 1517831 - 1517819 - g 71 -2.6 -5.0133 | TATTTGGGTAAAAAA GGGC ACTTA ACCC TTCAGATGACGACCC pheS 1517714 - 1518697 + | phenylalanyl-tRNA synthetase subunit alpha pheT 1518712 - 1521099 + | phenylalanyl-tRNA synthetase subunit beta ihfA 1521104 - 1521403 + | integration host factor subunit alpha TERM 1853 1521435 - 1521421 - f 100 -12.8 -4.88407 | opp_overlap 1521421 TGATCTAACTAAAAA GGCCGC TCT GCGGCC TTTTTTCTTTTCACT TERM 1854 1521421 - 1521435 + F 100 -12.8 -5.80951 | opp_overlap 1521421 TGATCTAACTAAAAA GGCCGC TCT GCGGCC TTTTTTCTTTTCACT btuC 1521504 - 1522484 + | vtamin B12-transporter permease btuE 1522547 - 1523098 + | putative glutathione peroxidase btuD 1523098 - 1523847 + | vitamin B12-transporter ATPase nlpC 1523925 - 1524389 + | lipoprotein TERM 1855 1525475 - 1525456 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 1525438 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_1451 1524490 - 1525521 + | IS630 orf TERM 1856 1525557 - 1525583 + F 100 -21 -3.79747 | opp_overlap 1525557 TAGTATGTCGAAAAA TGGACGGCGATG ATA CATCGCCGTCCA TTTACTCCTGAATAC TERM 1857 1525583 - 1525557 - f 100 -21 -4.60487 | opp_overlap 1525557 TAGTATGTCGAAAAA TGGACGGCGATG ATA CATCGCCGTCCA TTTACTCCTGAATAC SSON_1452 1525791 - 1526504 + | hypothetical protein SSON_1453 1526567 - 1528003 + | hypothetical protein ydiE 1528198 - 1528007 - | hypothetical protein TERM 1858 1528324 - 1528301 - R 100 -15.4 -3.86822 | opp_overlap 1528291 CAAGTTGCGCAGAAA TGCCCATTCC GTCA GGAATGGGCA CGCATTCAGAAGCGG aroH 1529376 - 1528330 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1859 1528722 - 1528735 + g 86 -6.7 -4.96848 | opp_overlap 1528722, overlap 1528712 CGCTGGTCTGATAGA TGGTC ATCT GACCA TTTTTGTCTGGCGAG TERM 1860 1529545 - 1529516 - R 76 -4.3 -4.98468 | opp_overlap 1529525, overlap 1529517 ATAACAAAAAAATAA GCTAATGCACTAG TTCT CTAGTACATTCGG CGACTAAGGCCCATG ydiA 1530366 - 1529533 - | hypothetical protein TERM 1861 1532387 - 1532405 + G 78 -8 -4.36914 | opp_overlap 1532386, overlap 1532399 1532402 TCTGACTGAAGGGAT CGCGACGC TGG GTGCCGCG TTTTATCCGAAGCGC ppsA 1530699 - 1533077 + | phosphoenolpyruvate synthase TERM 1862 1533114 - 1533080 - f 82 -5.5 -5.10665 | opp_overlap 1533085, overlap 1533084 1533085 ACTGAAGAAATAAAA TAAATCCCCGGCGGC GTTCA GTCGCCGGGGTTATG TGATCCCCGAAGATG TERM 1863 1533110 - 1533084 - f 100 -10.7 -5.02645 | opp_overlap 1533085, overlap 1533080 1533085 AAGAAATAAAATAAA TCCCCGGCGGC GTTCA GTCGCCGGGGT TATGTGATCCCCGAA TERM 1864 1533085 - 1533109 + F 100 -16.4 -3.54475 | opp_overlap 1533084 1533080 1533085 AGAAATAAAATAAAT CCCCGGCGGC GTTCA GTCGCCGGGG TTATGTGATCCCCGA TERM 1865 1533109 - 1533085 - f 93 -14.2 -3.57927 | opp_overlap 1533085, overlap 1533084 1533080 AGAAATAAAATAAAT CCCCGGCGGC GTTCA GTCGCCGGGG TTATGTGATCCCCGA SSON_1459 1533749 - 1534252 + | IS1 ORF TERM 1866 1534934 - 1534966 + T 74 -8.4 -3.86312 | overlap 1534936 1534937 TTAAATATATTTTTT AAGTTCGGCGGGGA GGGTG TTCCCGCCGAAATA TTATTGCTTATGCCT TERM 1867 1534936 - 1534964 + T 82 -11 -3.51235 | overlap 1534934 1534937 AAATATATTTTTTAA GTTCGGCGGGGA GGGTG TTCCCGCCGAAA TATTATTGCTTATGC TERM 1868 1534937 - 1534963 + T 86 -14.5 -2.70018 | overlap 1534936 1534934 AATATATTTTTTAAG TTCGGCGGGGA GGGTG TTCCCGCCGAA ATATTATTGCTTATG aroD 1535732 - 1534974 - | 3-dehydroquinate dehydratase TERM 1869 1535027 - 1535042 + g 91 -5.4 -5.40072 | gap 1 CATTTACCGAGATTT GCC-CTG GTG CAGAGGC TTTTTTTACCGCACC ydiB 1536629 - 1535763 - | quinate/shikimate dehydrogenase TERM 1870 1536166 - 1536178 + g 70 -3.5 -4.66535 | opp_overlap 1536173 AACTCATCCCGACGG TTAAA GAG TTTAA TTTCTTTTAAACCTT SSON_1463 1537912 - 1536641 - | putative amino acid/amine transport protein SSON_1464 1538980 - 1538477 - | IS1 ORF SSON_1466 1540607 - 1540224 - | hypothetical protein TERM 1871 1540745 - 1540726 - R 100 -9.3 -5.82388 | AAATGTTAAAAAAAA GCCCATC GTGGGA GATGGGC AAAGACTACACACAG SSON_1467 1541436 - 1540933 - | IS1 ORF TERM 1872 1541747 - 1541789 + r 72 -8.4 -3.80019 | opp_overlap 1541758, overlap 1541751 AAATATCAATTAGCG GTGATTAACAATCAGGCGGC AGA GCCGCCTGATGAGAAATTAC TTATTCGGTTTCTCG TERM 1873 1541778 - 1541758 - R 100 -16.9 -3.72027 | opp_overlap 1541751 1541747 AGCGGTGATTAACAA TCAGGCGGC AGA GCCGCCTGA TGAGAAATTACTTAT SSON_1468 1542898 - 1541786 - | putative inner membrane protein TERM 1874 1543685 - 1543706 + G 76 -3.7 -5.00616 | opp_overlap 1543682 AGATCAACTCAATCA GTACCTGAA ACCG TTCGGCTAC TTTTTTGCACCAGAA ydiJ 1543287 - 1546343 + | putative oxidase SSON_1470 1546340 - 1546750 + | hypothetical protein SSON_1471 1546769 - 1547038 + | hypothetical protein TERM 1875 1547263 - 1547293 + F 100 -17 -5.05116 | opp_overlap 1547263 CGGATGGGGTAGAAA CCCTTAAGCCTGTG TCG CACAGACTTAAGGG TTTTCTTATTTCTGA TERM 1876 1547293 - 1547263 - f 100 -19.2 -3.86897 | opp_overlap 1547263 CGGATGGGGTAGAAA CCCTTAAGCCTGTG TCG CACAGACTTAAGGG TTTTCTTATTTCTGA sufA 1547586 - 1547954 + | iron-sulfur cluster assembly scaffold protein TERM 1877 1548302 - 1548313 + GF 81 -7.2 -4.65895 | opp_overlap 1548301 GCGGTGCAGCAAACT GGCG CGAA CGCC TTTTTAAGTAAAGAG TERM 1878 1548532 - 1548511 - gf 73 -10.1 -3.34517 | overlap 1548509 ACTGGTGCGTAAATA TCTCGGCAC TGTG GTGCCGGGA AATGACAACTTCTTT ynhE 1547924 - 1549450 + | cysteine desulfurase activator complex subunit SufB sufC 1549460 - 1550206 + | cysteine desulfurase ATPase component ynhC 1550181 - 1551452 + | cysteine desulfurase activator complex subunit SufD TERM 1879 1552002 - 1551991 - g 77 -5.8 -4.66537 | GCTGGGAACAGAAAA TCCG CTGG CGGA AATAATCACGCTTGC SSON_1476 1551449 - 1552669 + | selenocysteine lyase ynhA 1552682 - 1553098 + | cysteine desufuration protein SufE TERM 1880 1553417 - 1553396 - g 71 -2.1 -4.88388 | opp_overlap 1553397 1553399, overlap 1553397 AGAAGGGGATAAAAA CCTTCAGGC TATT GCCCGACGT TTTGATACTGCGGCA ynhG 1553247 - 1554251 + | hypothetical protein TERM 1881 1554274 - 1554292 + T 100 -14.6 -4.74103 | opp_overlap 1554274 TAGCAGACAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCACTTCACAG TERM 1882 1554292 - 1554274 - T 100 -14.6 -5.74122 | opp_overlap 1554274 TAGCAGACAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCACTTCACAG lpp 1554550 - 1554314 - | murein lipoprotein TERM 1883 1554388 - 1554413 + g 70 -9.7 -3.17212 | gap 1 CTTTAGCAGCCTGAA CGTCG-GAACGC ATT GCGTTCACGTCG TTGCTCAGCTGGTCA TERM 1884 1554827 - 1554812 - R 100 -11.8 -5.68438 | opp_overlap 1554812 CGATTAAATAAAAAA GCGCCC ATCA GGGCGC TTCGATATACAAATT TERM 1885 1554812 - 1554827 + r 79 -11.8 -3.12847 | opp_overlap 1554812 CGATTAAATAAAAAA GCGCCC ATCA GGGCGC TTCGATATACAAATT pykF 1556272 - 1554860 - | pyruvate kinase TERM 1886 1555312 - 1555300 - G 81 -9.1 -4.08706 | opp_overlap 1555299 1555297 1555300 TCGCCATGATAGAAA CCGCT TCC AGCGG GTATTTACCTTTTGC SSON_1481 1556829 - 1557038 + | hypothetical protein TERM 1887 1557042 - 1557073 + F 77 -8.9 -3.83675 | gap 1, opp_overlap 1557037, overlap 1557043 CTGGTAAAATGACCA T-TCAGGATGAGGC GGTAA GCTTCATCCTGATA TTCTTGCTTCAGTTG TERM 1888 1557043 - 1557071 + F 93 -14 -3.4945 | opp_overlap 1557037, overlap 1557042 TGGTAAAATGACCAT TCAGGATGAGGC GGTAA GCTTCATCCTGA TATTCTTGCTTCAGT TERM 1889 1557309 - 1557319 + F 79 -2.6 -5.31275 | opp_overlap 1557309 GTTAAGGGCTCAGAA TAAT CAC ATTA TTTTTTCTCCTAACC SSON_1482 1557494 - 1558120 + | hypothetical protein TERM 1890 1559067 - 1559051 - g 81 -6.5 -4.87037 | opp_overlap 1559054, overlap 1559052 AATACACAGTAAAAA TGAGTGG CTG CCACTCT TGCCCGATCCGTTGT TERM 1891 1559066 - 1559052 - g 74 -10 -3.50595 | opp_overlap 1559054, overlap 1559051 ATACACAGTAAAAAT GAGTGG CTG CCACTC TTGCCCGATCCGTTG TERM 1892 1560156 - 1560143 - g 70 -4.5 -4.55295 | opp_overlap 1560146, overlap 1560145 TGTTCTACAAAGAAA TGGGC TGGG ACCCA CAGCTTGGTTGTCCA SSON_1483 1558141 - 1560249 + | putative oxidoreductase SSON_1484 1560253 - 1560900 + | hypothetical protein SSON_1485 1560913 - 1561632 + | putative oxidoreductase, Fe-S subunit ydhU 1561629 - 1562414 + | hypothetical protein SSON_1487 1562418 - 1563230 + | hypothetical protein SSON_1488 1564846 - 1563242 - | hypothetical protein TERM 1893 1563436 - 1563453 + g 72 -4.9 -4.62002 | gap 1, opp_overlap 1563438, overlap 1563438 AATCTTCGCCAACAT CA-GGGAT TTC ATCCCCTG TTTTCTGTAATTGCT TERM 1894 1564666 - 1564692 + g 71 -2.2 -4.88222 | opp_overlap 1564671, overlap 1564667 1564669 TAATCGGCGGTATTT CAATACTGGCAA TAT TTGCCAGCATCA TTTTTGAGTTTTCCT TERM 1895 1564687 - 1564671 - G 72 -10.9 -3.05844 | opp_overlap 1564669 1564667 1564666 GGCGGTATTTCAATA CTGGCAA TAT TTGCCAG CATCATTTTTGAGTT TERM 1896 1564957 - 1564943 - R 79 -8.5 -4.3014 | opp_overlap 1564943 AGACAGGGATGAAAA GGGCG CTAAC CGCCC TTGATTAAATTCTGT TERM 1897 1564972 - 1564990 + r 75 -9.6 -3.54676 | opp_overlap 1564968, overlap 1564968 CTTGATTAAATTCTG TCAGGCGA GTT TTGCCTGA TTGATTTGACTAAGT SSON_1489 1565277 - 1564972 - | hypothetical protein TERM 1898 1565389 - 1565367 - H 76 -4.9 -4.78661 | overlap 1565369 1565383 AGGGAAAAAGGAAAA GACCAGATT AAGAA AATCTGGTG CGTCCGAGTGGACTC TERM 1899 1565387 - 1565369 - H 71 -7.5 -3.99386 | overlap 1565367 1565383 GGAAAAAGGAAAAGA CCAGATT AAGAA AATCTGG TGCGTCCGAGTGGAC TERM 1900 1565414 - 1565383 - H 80 -6.7 -4.76075 | gap 2, overlap 1565369 1565367 ACCAGATTAAGAAAA TCTGGTGCGTCCGAG TGGA CTCGAAC-CACC-GA CCCCCACCATGTCAA TERM 1901 1565673 - 1565684 + H 70 -2.2 -5.07486 | overlap 1565681 CTATATTTTGTTGAT TTGC AAGG GCGA TTTTTATTCAGGATC TERM 1902 1566814 - 1566826 + G 74 -7.7 -4.09805 | opp_overlap 1566814 1566813 GCAGTACGGTAAAAG GTGAC AGC GTCAC TTTCATTGTTGGTAA SSON_1492 1565850 - 1567106 + | hypothetical protein TERM 1903 1567108 - 1567142 + T 79 -9.4 -4.15044 | gap 1, opp_overlap 1567110 1567114, overlap 1567114 TCCAGCCTGCGTAAA AACACAGGCGCAACC CGTGAA GGTTGCGCCT-TGTC TTTATTAGCGGGACG TERM 1904 1567140 - 1567110 - T 100 -12.7 -4.57073 | gap 1, opp_overlap 1567108 1567114, overlap 1567114 CAGCCTGCGTAAAAA CACAGGCGCAACCC GTGA AGGTTGCGCCT-TG TCTTTATTAGCGGGA TERM 1905 1567114 - 1567137 + T 100 -13.9 -3.96841 | opp_overlap 1567114 1567110, overlap 1567108 CTGCGTAAAAACACA GGCGCAACC CGTGAA GGTTGCGCC TTGTCTTTATTAGCG TERM 1906 1567137 - 1567114 - T 95 -14.6 -3.53855 | opp_overlap 1567108 1567114, overlap 1567110 CTGCGTAAAAACACA GGCGCAACCC GTGA AGGTTGCGCC TTGTCTTTATTAGCG ydhE 1568520 - 1567147 - | multidrug efflux protein TERM 1907 1568578 - 1568561 - H 80 -6.2 -4.85129 | overlap 1568552 ATGAGAGACTAAAAA GCCGCC TGAATG GGCAGC AAAAAGAAGAAGCAG TERM 1908 1569177 - 1569201 + G 70 -3.5 -4.69027 | gap 1, overlap 1569177 1569178 1569198 ACGGTATTAGCCTGA C-CGTCGGCG AAGTCA CGCCAACGCG TTTTTGCGTCCATTT ribE 1568735 - 1569376 + | riboflavin synthase subunit alpha TERM 1909 1569404 - 1569384 - T 93 -14 -3.60475 | opp_overlap 1569400 AAGCCTGATCTGAAA TCGCCCCC GGAGA GGGGGCGA TAGAATAGCCTTTAG cfa 1570564 - 1569416 - | cyclopropane fatty acyl phospholipid synthase ydhC 1572066 - 1570855 - | inner membrane transport protein YdhC ydhB 1572179 - 1573111 + | putative DNA-binding transcriptional regulator purR 1574133 - 1573108 - | DNA-binding transcriptional repressor PurR TERM 1910 1573596 - 1573608 + g 72 -10.5 -3.06796 | GGATAACGCCGATTT CGCGG TGA CCGCG TTCAATCAGATAACG TERM 1911 1574036 - 1574060 + g 91 -9.3 -4.71828 | overlap 1574029 GCCCACACGGCGTTG CGCGTTTCTTC AGC GACGAAACGTG TTTTGTTGATCACGT TERM 1912 1574084 - 1574118 + g 79 -4.4 -4.90079 | gap 1, opp_overlap 1574084, overlap 1574086 ATCACGTGTGACACA GTTGTAGTGGAAACG TTTGCT CGTTTC-GCTACATC TTTTATTGTTGCCAT TERM 1913 1574570 - 1574604 + H 72 -3 -4.96276 | CTCCTTCCTGTTTGT TAGCAAAATGGCAAAA GTG TTTTCTCTTTTTGTTA TTTTCATTTTTTTGT TERM 1914 1575840 - 1575824 - g 70 -5.1 -4.42653 | overlap 1575834 1575836 ATGTCAGCCAGAAAA CAACCTG AAA CAGTTTG CGTTGCCAACAGCTA SSON_1499 1574687 - 1575856 + | putative transport protein TERM 1915 1575889 - 1575868 - T 100 -14.5 -5.38326 | opp_overlap 1575862 CTAATTAAACAAAAA CGCAGAAGG ATAA CCTTCTGCG TTACAGTTGCTGACA sodB 1576583 - 1576002 - | superoxide dismutase TERM 1916 1576678 - 1576708 + r 79 -9.2 -4.09511 | gap 1, opp_overlap 1576674 1576678 1576679, overlap 1576678 GAGACAAAAGATGAA CTT-ACCCTGTTG CCGTAA CAACAGGGTAAAG TTTTAGCGAAGTGTT TERM 1917 1576707 - 1576678 - R 88 -12.3 -3.59432 | opp_overlap 1576678 1576678, overlap 1576674 1576679 GAGACAAAAGATGAA CTTACCCTGTTGC CGTA ACAACAGGGTAAA GTTTTAGCGAAGTGT TERM 1918 1576706 - 1576679 - R 83 -13.6 -2.74575 | opp_overlap 1576678 1576678, overlap 1576678 1576674 AGACAAAAGATGAAC TTACCCTGTTGC CGTA ACAACAGGGTAA AGTTTTAGCGAAGTG ydhO 1577526 - 1576711 - | putative lipoprotein TERM 1919 1577129 - 1577158 + g 90 -7.9 -4.81249 | gap 1 TGCACCTTCGCTTTG TG-CGCGTCGGCAA GAG TTCCTGACGCGGCA TTTTTGACTTTCACA TERM 1920 1577220 - 1577231 + g 70 -3.6 -4.63486 | overlap 1577227 1577228 ACTTTTCGGTAAAGC TGGC TGAG GCCG TTTTATTGACGGCGT ydhD 1577860 - 1578207 + | hypothetical protein TERM 1921 1578219 - 1578252 + T 83 -9.6 -4.12532 | opp_overlap 1578208 1578222, overlap 1578222 ATAATCCGTCCTGCA ATACTGACGGATGC GAACGG GCATCCGTCAGTCC TTTCTCTATCCCCAA TERM 1922 1578222 - 1578249 + T 93 -15.7 -3.09116 | opp_overlap 1578208 1578222, overlap 1578219 ATCCGTCCTGCAATA CTGACGGATGC GAACGG GCATCCGTCAG TCCTTTCTCTATCCC TERM 1923 1578249 - 1578222 - T 93 -15.7 -3.01791 | opp_overlap 1578219 1578222, overlap 1578208 ATCCGTCCTGCAATA CTGACGGATGC GAACGG GCATCCGTCAG TCCTTTCTCTATCCC TERM 1924 1578605 - 1578627 + T 74 -11.3 -2.81118 | opp_overlap 1578605, overlap 1578604 1578623 GATCGTTGGCAGAGA GCGCCACTG GTGTA TAGTGGCGC GTTTGCGTGGCTTGT TERM 1925 1578627 - 1578605 - T 72 -10.6 -2.87344 | opp_overlap 1578605 1578604 1578623 GATCGTTGGCAGAGA GCGCCACT GGTGTAT AGTGGCGC GTTTGCGTGGCTTGT TERM 1926 1581630 - 1581618 - T 74 -6.9 -4.19624 | CACTGGCAACAGAAA GCGGC GTT GCCAC CTGAATCATCAGATC rnt 1583567 - 1582920 - | ribonuclease T TERM 1927 1583544 - 1583530 - G 77 -7.1 -4.45077 | opp_overlap 1583529 TAAAAACCACGAAAA CGGTC GCACA GACCG GTAAGTTGAGCGTTA TERM 1928 1583664 - 1583637 - R 73 -9.9 -3.46647 | gap 1, overlap 1583635 TCGATGCAGTAAAGA TG-CGGGCGCGA TGAGT TCACGCCCGGCA GGAGATTAGTTGCCC gloA 1584077 - 1583670 - | glyoxalase I TERM 1929 1583799 - 1583812 + g 71 -2.3 -5.01732 | overlap 1583800 ACGGGTCACGTTACC CCCGT TTTG ACGGA TTTTTTCGCACGCTT nemA 1585255 - 1584158 - | N-ethylmaleimide reductase TERM 1930 1585208 - 1585195 - G 75 -4.5 -4.82901 | opp_overlap 1585195 GCGGTGCCATAAAAA TACGG TTTG CCGCA GTTATTGCGCCCACT TERM 1931 1585305 - 1585286 - RH 81 -4.9 -5.24129 | overlap 1585287 TCTGGTGATAAAAAA TGCCTGC TAAACG GCAGGCG TCGCAATAATGGTTT TERM 1932 1585304 - 1585287 - RH 72 -8.4 -3.73995 | overlap 1585286 CTGGTGATAAAAAAT GCCTGC TAAACG GCAGGC GTCGCAATAATGGTT SSON_1508 1585891 - 1585292 - | hypothetical protein SSON_1507 1585856 - 1586233 + | hypothetical protein SSON_1509 1586282 - 1587178 + | hypothetical protein TERM 1933 1587532 - 1587505 - g 81 -11.2 -3.69902 | gap 1, opp_overlap 1587504 1587502, overlap 1587498 1587496 ACCAAAGATGGCAAA GCCAGCGCCGCGG AAT CCGCAG-GCGGGC ATCTTGATCCACAAA TERM 1934 1587743 - 1587733 - g 72 -8.2 -3.78329 | opp_overlap 1587739 TCCGATCAACCTAAA CCGC TGG GCGG TGGCGGTGAACGCTA sodC 1587259 - 1587780 + | superoxide dismutase SSON_1511 1589772 - 1587781 - | hypothetical protein TERM 1935 1587874 - 1587853 - G 73 -11.5 -2.6914 | opp_overlap 1587852 1587851, overlap 1587840 1587852 CAGCCGCCAGACAAT TGCCGCCAG CTCA CGGGCGGCA GGTTGATGATGACGG SSON_1512 1590692 - 1589793 - | hypothetical protein TERM 1936 1589984 - 1589998 + gr 73 -4.2 -4.79955 | opp_overlap 1589984 GACCGATACTGGAAA CGTGAC CCT GTAACG TTTTGTTATCACTAT SSON_1513 1590889 - 1590653 - | hypothetical protein slyA 1591090 - 1591524 + | transcriptional regulator SlyA TERM 1937 1591566 - 1591531 - T 86 -11.8 -3.5332 | opp_overlap 1591531, overlap 1591527 1591519 AAAGGGTGAAATGAA GGGGGCGTGTGGTCAG TAAC CTGACCACACGCAAAC TTATTTAGCGCGGAG TERM 1938 1591531 - 1591566 + T 95 -11.8 -3.90744 | opp_overlap 1591531 1591527 1591519 AAAGGGTGAAATGAA GGGGGCGTGTGGTCAG TAAC CTGACCACACGCAAAC TTATTTAGCGCGGAG slyB 1592038 - 1591571 - | putative outer membrane protein TERM 1939 1593295 - 1593257 - g 100 -16.8 -3.51924 | opp_overlap 1593271 1593287 CTGCCAGGCACAGAA GTCACCACCACCGATGCC GTT GGCATTAGTGGCGATGAC ATGGAAGCATTGGCA anmK 1592312 - 1593421 + | anhydro-N-acetylmuramic acid kinase ydhA 1593600 - 1593848 + | hypothetical protein TERM 1940 1594159 - 1594138 - g 81 -5.9 -4.78107 | gap 1, overlap 1594142 CATTACGACGAAAAA GGCATGGTGT TTT ACACCA-ACC TCGGCAGCCGTAAAG TERM 1941 1594484 - 1594509 + G 73 -4 -4.83169 | gap 1 TTGAGTTCTGGCAGG GCGGTGA-GCA TCGCC TGCATGACCGC TTTTTGTACCAGCGT pdxH 1593907 - 1594563 + | pyridoxamine 5'-phosphate oxidase TERM 1942 1595584 - 1595567 - g 84 -4.1 -5.21506 | gap 1, overlap 1595569 1595577 1595578 1595580 AGAAGAAGATAAAAA CAGCGGTA AAG CACCGC-G CGCCCAGTATGTACT TERM 1943 1595583 - 1595569 - g 76 -7.8 -4.20977 | overlap 1595567 1595577 1595578 1595580 AAGAAGATAAAAACA GCGGTA AAG CACCGC GCGCCCAGTATGTAC tyrS 1594692 - 1595966 + | tyrosyl-tRNA synthetase TERM 1944 1595979 - 1596008 + F 100 -10.7 -4.82901 | opp_overlap 1595982, overlap 1595980 1595982 TAATGCATTAAGTGG AAAGGGGGAGTGA GAAA TCACTCCCCCTGG TTTTTATACAGGGAA TERM 1945 1595980 - 1596007 + F 93 -14.2 -3.49419 | opp_overlap 1595982, overlap 1595979 1595982 AATGCATTAAGTGGA AAGGGGGAGTGA GAAA TCACTCCCCCTG GTTTTTATACAGGGA TERM 1946 1595982 - 1596005 + F 100 -16.8 -3.31915 | opp_overlap 1595982, overlap 1595980 1595979 TGCATTAAGTGGAAA GGGGGAGTGA GAAA TCACTCCCCC TGGTTTTTATACAGG TERM 1947 1596005 - 1595982 - f 100 -16.8 -3.67976 | opp_overlap 1595980 1595979 1595982 TGCATTAAGTGGAAA GGGGGAGTGA GAAA TCACTCCCCC TGGTTTTTATACAGG pdxY 1596025 - 1596888 + | pyridoxamine kinase TERM 1948 1597432 - 1597461 + T 89 -9.3 -4.59109 | opp_overlap 1597433, overlap 1597434 CACCGTTTTCGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1949 1597460 - 1597433 - T 81 -12.8 -3.14211 | opp_overlap 1597432 1597434 ACCGTTTTCGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 1950 1597434 - 1597459 + T 100 -16.3 -3.90762 | opp_overlap 1597433, overlap 1597432 CCGTTTTCGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_1521 1598081 - 1597443 - | IS4 orf SSON_1522 1598787 - 1598200 - | IS4 orf TERM 1951 1598777 - 1598802 + g 73 -9.1 -3.61398 | opp_overlap 1598777 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 1952 1598802 - 1598777 - G 100 -9.8 -5.61596 | opp_overlap 1598777 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1953 1598857 - 1598869 + r 83 -4.1 -5.28481 | TGATCGGCATTACAC CGTTT TCG AGACG TTTTTTCATTAAATC TERM 1954 1599055 - 1599033 - R 100 -13.5 -6.09888 | opp_overlap 1599033 GCTGAACAAAAAAAA GCCGCTAAC GAAAA GTTAGCGGC TTGTAAAAGAGTTTC TERM 1955 1599033 - 1599055 + r 86 -13.5 -3.30635 | opp_overlap 1599033 GCTGAACAAAAAAAA GCCGCTAAC GAAAA GTTAGCGGC TTGTAAAAGAGTTTC tppB 1600581 - 1599079 - | putative tripeptide transporter permease TERM 1956 1599545 - 1599510 - G 70 -11.2 -2.7924 | gap 1, opp_overlap 1599543, overlap 1599505 1599503 CACCAGAACACATCA CCATGCCGATTGCAAAC TTG GTTGGCA-TCGGCAGGG TATCGCCCATCTTGT TERM 1957 1600134 - 1600150 + g 76 -3.5 -4.91511 | opp_overlap 1600122 ACATGGTGAATGCAC CGTCCAG ACG CGGGTCG TTTTTCTCATAGCAT TERM 1958 1600529 - 1600556 + g 74 -8.6 -3.90592 | gap 1, opp_overlap 1600516 1600513 1600535 1600544, overlap 1600522 1600530 1600540 AACGCCTTCGGTTGT TTGAAAGCGTTCA AAC TGA-CGCTTTCAG TTGGTTTTTGGTTTG TERM 1959 1600540 - 1600560 + g 76 -4 -4.99134 | opp_overlap 1600535 1600544, overlap 1600522 1600530 1600529 TTGTTTGAAAGCGTT CAAACTGA CGCTT TCAGTTGG TTTTTGGTTTGCAGT TERM 1960 1601166 - 1601185 + r 84 -8.6 -4.66987 | opp_overlap 1601165 1601166 AGAAAGGTTATCAAT GGGGTAAT CGGT GTTACCCC TTTTCTTCAGATGTC nth 1601827 - 1601192 - | endonuclease III ydgQ 1602522 - 1601827 - | SoxR-reducing system protein RsxE TERM 1961 1602114 - 1602100 - G 72 -11.4 -2.50195 | overlap 1602090 1602099 1602097 ACCCAGCACGAACAT GGCGCA GGT TGCGCC CATACCAATTGAAAA TERM 1962 1602132 - 1602156 + g 74 -3.4 -5.00616 | opp_overlap 1602132, overlap 1602133 TACCAATTGAAAAGC CGTCCAGTGC CGAAA GCGCCGGACC TTTTTTGGCGGCGAA SSON_1527 1603146 - 1602526 - | electron transport complex protein RnfG rnfD 1604208 - 1603150 - | electron transport complex protein RnfD TERM 1963 1603327 - 1603308 - G 70 -6.4 -4.17048 | overlap 1603310 1603313 GCGCGCCGAAAATAA GACGACCA CGAT TGGTCGTA GAAGCGGTAACCGGG TERM 1964 1603325 - 1603310 - G 73 -9 -3.68435 | overlap 1603308 1603313 GCGCCGAAAATAAGA CGACCA CGAT TGGTCG TAGAAGCGGTAACCG TERM 1965 1604114 - 1604098 - G 79 -2.2 -5.27477 | opp_overlap 1604104, overlap 1604099 ACCCCAACCAAAAAA CCACAG TTGCG CTGCGA TTCCTGGCACGGCTG SSON_1529 1606431 - 1604209 - | electron transport complex protein RnfC TERM 1966 1604270 - 1604283 + g 71 -9.5 -3.54424 | opp_overlap 1604267 GCGCGGGCAATAGCC GCGGC AACT GCCGC TTTGCGCGGATCAAC TERM 1967 1605918 - 1605932 + g 72 -8.6 -3.80142 | GCTCGCACTCAGCCG CGTTGA TAA TCAACG TTTCAATCTTATCTC TERM 1968 1606334 - 1606307 - G 100 -12.7 -4.90079 | overlap 1606309 AGTGGAATAACAAAA CGCTGCGCCAG TGGTAC CTGGCGCAGGG GTGTACCGTTGGACT TERM 1969 1606332 - 1606309 - G 85 -13.9 -2.71055 | overlap 1606307 TGGAATAACAAAACG CTGCGCCAG TGGTAC CTGGCGCAG GGGTGTACCGTTGGA TERM 1970 1606383 - 1606399 + g 87 -4.5 -5.28176 | overlap 1606348 GATGGATGCCGCCGT TGAAATC CCA GATTTTA TTTTTTCTGAATGCA SSON_1530 1607002 - 1606424 - | electron transport complex protein RnfB SSON_1531 1607583 - 1607002 - | Na(+)-translocating NADH-quinone reductase subunit E SSON_1532 1608124 - 1607660 - | hypothetical protein TERM 1971 1608062 - 1608043 - G 75 -7 -4.3014 | overlap 1608047 ACAGAGCGACTAAAA GCCAGGCC AACG GGCCAAGC AACCAGCCTCCAATA SSON_1533 1608401 - 1608186 - | oriC-binding nucleoid-associated protein TERM 1972 1608645 - 1608623 - H 72 -6.3 -4.3208 | gap 1 TCCGACAAGTGAAAA CATGC-ACCC GGAC GGGCAGCATG TCGCTCCACAAGTGC SSON_1534 1609035 - 1610075 + | putative oxidoreductase TERM 1973 1610104 - 1610080 - T 100 -17.3 -4.56597 | opp_overlap 1610080 GCCTTGCGTGAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTGTTACTTCGC TERM 1974 1610080 - 1610104 + T 100 -17.3 -5.1963 | opp_overlap 1610080 GCCTTGCGTGAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTGTTACTTCGC TERM 1975 1610131 - 1610143 + T 76 -4.7 -4.80882 | TCGCGGCGACTTTTT CTCGC AGT GCGCG TTTTTCCTCTGCGCT add 1611112 - 1610111 - | adenosine deaminase TERM 1976 1610835 - 1610855 + g 74 -11.1 -3.20387 | opp_overlap 1610834, overlap 1610834 CGCAGCTCGACATAG TGCAGGCCG TTA CGGGCTGCA TCTTCAATGTTTTCA TERM 1977 1611216 - 1611175 - R 84 -8.7 -4.652 | overlap 1611176 AAAGCAGGGTAAAAA TCCACGATTGCGCAACG ATTTTTTA CGTTGCGCAATTGGGGT TAGCGAACAGCGCGG TERM 1978 1611215 - 1611176 - R 85 -12.2 -3.38036 | overlap 1611175 AAGCAGGGTAAAAAT CCACGATTGCGCAACG ATTTTTTA CGTTGCGCAATTGGGG TTAGCGAACAGCGCG malY 1612388 - 1611216 - | hypothetical protein malX 1613990 - 1612398 - | bifunctional maltose and glucose-specific PTS system components IICB TERM 1979 1613119 - 1613100 - G 74 -8.6 -3.87373 | gap 1 CAGACCGCCGAGAAA CGC-AGGCA TTT TGCCTTGCG AAAGGAAACGCGTGG TERM 1980 1613623 - 1613633 + g 72 -6.8 -4.24342 | overlap 1613596 GCGGCGTCCGTGGTT GGCA GAA TGCC TTTATTGGTCAACCA malI 1614165 - 1615193 + | DNA-binding transcriptional repressor MalI TERM 1981 1615262 - 1615252 - f 85 -5.4 -5.37345 | opp_overlap 1615255 GTTAATGATAAAAAA TGTG GCA CACA GGCGGTGCCTTTTAT TERM 1982 1615255 - 1615271 + F 84 -5.1 -5.3104 | opp_overlap 1615252 AATGATAAAAAATGT GGCAC ACAGGCG GTGCC TTTTATTTTTACTGA SSON_1539 1615396 - 1615698 + | IS600 ORF1 SSON_1540 1615839 - 1616552 + | IS600 ORF2 hdhA 1616635 - 1617402 + | 7-alpha-hydroxysteroid dehydrogenase TERM 1983 1617445 - 1617415 - f 83 -14.2 -2.604 | overlap 1617412 1617411 TAATACACTAACGGA CCGGTAAACAAC CGTGCGT GTTGTTTACCGG GATAAACTCATCAAC uidR 1617623 - 1618213 + | repressor for uid operon TERM 1984 1618225 - 1618251 + F 74 -8.7 -3.90684 | gap 1 CTGATCCTCTCATTT CGCGGGC-TGGT GATA ACTGTGCCCGCG TTTCATACTTTAATT TERM 1985 1618748 - 1618726 - g 72 -6.2 -4.30719 | opp_overlap 1618725 GCGCGTTACAAGAAA GCCGGGCA ATTGCTG TGCCAGGC AGTTTTAACGATCAG TERM 1986 1619817 - 1619804 - g 73 -3.8 -4.83169 | opp_overlap 1619804, overlap 1619805 AGCGCGTGACAAAAA CCAC CCAAGC GTGG TGATGTGGAGTATTG uidA 1618602 - 1620413 + | beta-D-glucuronidase TERM 1987 1620864 - 1620830 - g 100 -14.3 -3.69395 | gap 1, opp_overlap 1620830 1620854 GCGATGACCCAACAA CCACAATCCCGCGCCC GTCT GGGCGCG-GCTCGTGG GATTGCCGCTTCATT uidB 1620410 - 1621783 + | glucuronide transporter TERM 1988 1623118 - 1623095 - g 91 -11.7 -4.11304 | opp_overlap 1623095 TGAAGTCAGAAATAA CGCCGGAGA GAAAAA CCTCCGGCG TTTCAGATTGTTGAC TERM 1989 1623095 - 1623118 + G 84 -11 -3.72051 | opp_overlap 1623095 TGAAGTCAGAAATAA CGCCGGAG AGAAAAAC CTCCGGCG TTTCAGATTGTTGAC uidC 1621822 - 1623132 + | putative outer membrane porin protein TERM 1990 1623299 - 1623276 - T 76 -7.4 -4.34402 | opp_overlap 1623276 1623295 GTTTTCAGATGAAAA CGCCGAAG TGAAAATT CTCCGGCG TTTTGGCCGTGAATT ydgA 1624821 - 1623313 - | hypothetical protein TERM 1991 1623645 - 1623663 + g 74 -8.1 -4.04927 | gap 1 AACGATCTACTTCCT GCGCCAGC GTTT GC-GGCGC TTCTTTAGTCGTTGC TERM 1992 1624294 - 1624311 + g 73 -4 -4.86773 | overlap 1624292 1624296 ATTTAACTGGAACTC GCCGCC GCTAAA GGCGAC TTTTTCATCCTTTTG TERM 1993 1624864 - 1624844 - R 95 -12.6 -4.27483 | opp_overlap 1624842 1624841 1624858 ATCCATAAAATGAAA TCAGGCGG ACTGG CCGCCTGA AGGTGTTATAAGCCT manA 1626097 - 1624922 - | mannose-6-phosphate isomerase TERM 1994 1625887 - 1625848 - G 95 -15.2 -3.06583 | gap 1, opp_overlap 1625839, overlap 1625853 ATAATACTTTGAACA GGAAAGGCAGTTCGCCAAA GCG TTTGGC-AACGGCCTCTCC GAGCAGAGTCGATTT TERM 1995 1625882 - 1625853 - G 81 -10.1 -3.92592 | gap 1, opp_overlap 1625839, overlap 1625848 ACTTTGAACAGGAAA GGCAGTTCGCCAAA GCG TTTGGC-AACGGCC TCTCCGAGCAGAGTC TERM 1996 1626362 - 1626344 - g 74 -2.4 -5.08824 | TTTCCACTCAAAAAA GATGATAC TGA GTATTACC TGCTAACCAGCGAAC TERM 1997 1626444 - 1626472 + G 72 -7.4 -3.97947 | overlap 1626423 AAGCGTTAACTCTGT TGGCGCGTCAGG CGTTT CATGATGCGTCA TTTATGCTGCGTCCG TERM 1998 1626908 - 1626896 - g 74 -7.7 -4.11623 | TATCAGGAAACCAAA GCGTT ACT AACGC CGGGGAAACTGAAAA TERM 1999 1627322 - 1627307 - g 72 -4.7 -4.66163 | ATCTGGATCGAAAAA CTGGA ACATAA TCCAG GTAAATATATCCCTG fumA 1626296 - 1627942 + | fumarase A TERM 2000 1627949 - 1627964 + F 100 -11.8 -5.47218 | opp_overlap 1627949 1627948 1627946 1627944 GTGAAATAAACAGAG CCGCCC TTCG GGGCGG TTTTTTTACATGGCA TERM 2001 1627964 - 1627949 - f 76 -11.8 -2.68607 | opp_overlap 1627949, overlap 1627948 1627946 1627944 GTGAAATAAACAGAG CCGCCC TTCG GGGCGG TTTTTTTACATGGCA TERM 2002 1628968 - 1628999 + G 76 -12.2 -2.50443 | gap 1, opp_overlap 1628966, overlap 1628967 AAATCGCCAATGATG TCCGCTG-GCTGGCC TCT GGCCCGCGCTGCGGA ATTGGTGAAATCTCA fumC 1628085 - 1629488 + | fumarate hydratase tus 1630414 - 1629485 - | DNA replication terminus site-binding protein rstB 1631791 - 1630490 - | sensor protein RstB rstA 1632523 - 1631795 - | DNA-binding transcriptional regulator RstA ydgC 1632643 - 1632978 + | hypothetical protein ydgB 1633697 - 1632975 - | short chain dehydrogenase TERM 2003 1633061 - 1633041 - G 76 -10.5 -3.35867 | opp_overlap 1633041, overlap 1633030 1633045 GCAACTGGTAAGTAA GTAATCGAC CAG GTCGATCAC TTCTTTCTCGCCAGG TERM 2004 1633041 - 1633061 + g 77 -8.3 -4.06419 | opp_overlap 1633041 1633030 1633045 GCAACTGGTAAGTAA GTAATCGAC CAG GTCGATCAC TTCTTTCTCGCCAGG SSON_1555 1635116 - 1633734 - | putative arginine/ornithine antiporter TERM 2005 1634703 - 1634691 - G 73 -4.1 -4.77036 | GCGCAGGATCAAAAA GTGAA CAA TCCAC AATAAAGCCGATGCA TERM 2006 1635281 - 1635265 - R 83 -10.8 -3.81062 | opp_overlap 1635265, overlap 1635258 ACTAAAAATGCGAAA GGCGGC ATCAA GCCGCC TTATAGGAGTAACTG TERM 2007 1635265 - 1635281 + r 77 -10.8 -3.31461 | opp_overlap 1635265 1635258 ACTAAAAATGCGAAA GGCGGC ATCAA GCCGCC TTATAGGAGTAACTG ydgH 1636246 - 1635302 - | hypothetical protein TERM 2008 1635336 - 1635371 + g 73 -12 -2.72855 | gap 1, overlap 1635326 CTGACGGTCAGGTTA TTACCACGTT-CCTGCC ACT GGCGGGTGATGTGGTAA TACTTAGCACCTTTC pntA 1636770 - 1638302 + | NAD(P) transhydrogenase subunit alpha pntB 1638313 - 1639701 + | pyridine nucleotide transhydrogenase TERM 2009 1639704 - 1639729 + T 95 -13.3 -3.69068 | overlap 1639702 1639705 GAAAGCTCTGTAACC CTGACGGCCTC TGCG GAGGCCGTCAC TCTTTATTGAGATCG TERM 2010 1639705 - 1639728 + T 100 -16.8 -2.80958 | overlap 1639704 1639702 AAAGCTCTGTAACCC TGACGGCCTC TGCG GAGGCCGTCA CTCTTTATTGAGATC tqsA 1640760 - 1639726 - | putative transport protein TERM 2011 1639891 - 1639876 - G 74 -3.2 -5.00765 | overlap 1639878 1639885 AATCAACGACAAAAA TACCAC CAAT GTGGAA AGCCCCAGCCCACGT TERM 2012 1641050 - 1641060 + H 74 -8.2 -3.92804 | overlap 1641049 AGGTGAGCAGCACTG GCGC AAC GCGC TTTAGTCCTTTCTTC SSON_1560 1641172 - 1641537 + | multidrug efflux system protein MdtJ SSON_1561 1641524 - 1641853 + | multidrug efflux system protein MdtI TERM 2013 1641851 - 1641891 + T 86 -9.1 -4.40561 | gap 1, opp_overlap 1641858 1641860, overlap 1641851 1641860 ATGGTGAAACTTGCC TGATGAACACGCTGCCCG CACAGT CGGGCAGCGT-TTGAACA TTATTTTTGCGACAG TERM 2014 1641885 - 1641858 - T 81 -12.7 -3.14463 | opp_overlap 1641851 1641851 1641860, overlap 1641860 AACTTGCCTGATGAA CACGCTGCCCG CACAGT CGGGCAGCGTT TGAACATTATTTTTG TERM 2015 1641860 - 1641883 + T 100 -15.3 -3.65722 | opp_overlap 1641858 1641860, overlap 1641851 1641851 CTTGCCTGATGAACA CGCTGCCCG CACAGT CGGGCAGCG TTTGAACATTATTTT TERM 2016 1641883 - 1641860 - T 100 -15.3 -3.13403 | opp_overlap 1641860 1641851 1641851, overlap 1641858 CTTGCCTGATGAACA CGCTGCCCG CACAGT CGGGCAGCG TTTGAACATTATTTT SSON_1562 1642713 - 1641892 - | hypothetical protein TERM 2017 1642944 - 1642914 - R 76 -11.9 -2.71924 | opp_overlap 1642912 1642915, overlap 1642913 TACCCTCCGCTAAAG GCGGTGCTAAACG TTACC CGCTTAGCACCGT AATTTTCAGGCGCGA TERM 2018 1642915 - 1642943 + r 82 -13.2 -3.08032 | opp_overlap 1642914 1642913, overlap 1642912 ACCCTCCGCTAAAGG CGGTGCTAAACG TTACC CGCTTAGCACCG TAATTTTCAGGCGCG asr 1643261 - 1642989 - | acid shock protein precursor TERM 2019 1643137 - 1643147 + g 72 -6.8 -4.17477 | overlap 1643120 1643117 GCCTGCGCTTTCTGG GCAG GTG CTGC TTTATGCTGTTTTTT SSON_1564 1644005 - 1643385 - | IS2 ORF2 SSON_1565 1644864 - 1644067 - | IS21 ORF2 SSON_1566 1646036 - 1644864 - | IS21 ORF1 TERM 2020 1645194 - 1645214 + g 77 -9.7 -3.59979 | overlap 1645190 1645198 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 2021 1645198 - 1645210 + g 75 -6.9 -4.44046 | overlap 1645190 1645194 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_1567 1646425 - 1646123 - | IS2 ORF2 TERM 2022 1647151 - 1647186 + r 93 -9.8 -4.58395 | gap 1, opp_overlap 1647151 1647154 GGTTTGAGCAAGCAA TAAGTCCGGACGTGTAG TTA CCGCA-GTCCGGGCTTA TTTTTCAGGCGTGCA ynfM 1648444 - 1647191 - | putative transport protein TERM 2023 1648608 - 1648633 + G 76 -11.1 -3.34398 | overlap 1648607 GCGGAAGAGCTGCAT TTCGGGCGCGC CGCT GCCCGCCTGAA TATTTCGCAACCACC TERM 2024 1649117 - 1649135 + G 83 -5.2 -5.14563 | AACGCTGGCTGAACT GGCGAAAG AAC CCTTCGTC TTTTTTGATCCGCAC ynfL 1648551 - 1649444 + | putative transcriptional regulator LYSR-type TERM 2025 1649841 - 1649867 + G 70 -4.4 -4.4773 | overlap 1649843 1649863 AAGCCTGGCACTATC TTTCTCTGCG CATTAGT CGCGGGGAGA TTTTCCTTGCTCTGC TERM 2026 1650136 - 1650101 - g 72 -6.8 -4.21908 | gap 1, opp_overlap 1650135, overlap 1650105 1650135 TACGAGGATGTAAAA GAGATGCCGCT-CGGCG AGG CGCTGGAGCAGCATACC GGCGTACCGGTTTAT TERM 2027 1650135 - 1650146 + G 72 -7.2 -4.19624 | opp_overlap 1650101 1650135 CGCTGGAGCAGCATA CCGG CGTA CCGG TTTATATTCAGCATG mlc 1649579 - 1650799 + | putative NAGC-like transcriptional regulator SSON_1571 1650924 - 1651619 + | putative dithiobiotin synthetase SSON_1572 1652828 - 1651572 - | putative voltage-gated ClC-type chloride channel ClcB TERM 2028 1651660 - 1651690 + g 77 -9.7 -3.64599 | opp_overlap 1651663, overlap 1651663 ACGCAGGCAATCAAT AAACCGGGGAGTA GCTGA TACTCCCCGGTCA TTTCACATATCATCA TERM 2029 1651663 - 1651687 + g 95 -15.8 -2.93585 | opp_overlap 1651663, overlap 1651660 CAGGCAATCAATAAA CCGGGGAGTA GCTGA TACTCCCCGG TCATTTCACATATCA TERM 2030 1651687 - 1651663 - G 100 -15.8 -4.33621 | opp_overlap 1651663 1651660 CAGGCAATCAATAAA CCGGGGAGTA GCTGA TACTCCCCGG TCATTTCACATATCA TERM 2031 1652515 - 1652480 - G 70 -10.4 -3.14344 | opp_overlap 1652477 CACCTTCGCGACCAA TTGCACTGCCGCTGGT TACT ACCAGCAGCGAGGCAA GCGATTTAACCAGGC SSON_1573 1653637 - 1653023 - | twin-argninine leader-binding protein DmsD TERM 2032 1653168 - 1653156 - G 75 -4.8 -4.82518 | AAAACATCAAGAAAA CGTG TTGAC CACG GAAAAAGGTGCCATG TERM 2033 1653487 - 1653462 - G 70 -6.9 -4.07885 | gap 1, opp_overlap 1653463 1653464, overlap 1653463 CACTGTGTCTGAAAA GCCGTCACCAGC GGC GCTAATGACG-C TTCTGGTAGAGGCCA TERM 2034 1653562 - 1653541 - G 70 -10.9 -2.74012 | gap 1, opp_overlap 1653544, overlap 1653543 TGAGTACCGCAACCA GAG-GTGCGG CTT CCGCACTCTC TGGAGCGTAATAAAA TERM 2035 1653544 - 1653558 + g 75 -11.4 -2.8805 | opp_overlap 1653543 1653541 GTACCGCAACCAGAG GTGCGG CTT CCGCAC TCTCTGGAGCGTAAT TERM 2036 1653600 - 1653578 - G 95 -9.8 -4.65916 | overlap 1653592 TGGAGCGTAATAAAA CAGCGCGC CCAACAC GCGCGCCG CGACAGAAAAATTAT TERM 2037 1653673 - 1653654 - R 72 -9.2 -3.6106 | opp_overlap 1653654 1653653, overlap 1653655 CCTAACATCCTGAAA TGTGCGGG TTGC CCCGCACC AATTTGTTAACCTGC TERM 2038 1653672 - 1653655 - R 79 -12.7 -2.76315 | opp_overlap 1653654 1653653, overlap 1653654 CTAACATCCTGAAAT GTGCGGG TTGC CCCGCAC CAATTTGTTAACCTG SSON_1574 1654534 - 1653680 - | putative DMSO reductase anchor subunit TERM 2039 1654170 - 1654156 - G 78 -7.8 -4.3586 | TCATCCAGACGAAAA TGACGC CGA GCGCCA TGCTGACAAGTAACC TERM 2040 1654413 - 1654427 + g 72 -5.7 -4.56597 | opp_overlap 1654410 1654408, overlap 1654410 CCACGGACAATACGC TGACG GTCTG CGTCA TTTTTGGCGGCGAAC SSON_1575 1655153 - 1654536 - | putative oxidoreductase, Fe-S subunit TERM 2041 1655595 - 1655610 + H 85 -6.2 -5.15969 | TATACGCAGGAAGGG GATGAA TAAC TTCATC TTTTTTCAATTCCCA TERM 2042 1655716 - 1655748 + H 82 -2.8 -5.45652 | overlap 1655742 TGGATCTTCACGGAA TGCGCGGAA-AGCGAC GTA GT-GTTCTTCCGGGCA TTTTTTCTTAAAGAT TERM 2043 1656193 - 1656210 + H 86 -4.1 -5.45802 | opp_overlap 1656193, overlap 1656187 GTAGCACCATAAAAA CTTGATG GGGA CATCCAG TTTTTCTTTTCCACG TERM 2044 1656210 - 1656193 - H 76 -4.1 -4.93296 | opp_overlap 1656193 1656187 GTAGCACCATAAAAA CTTGATG GGGA CATCCAG TTTTTCTTTTCCACG SSON_1577 1656492 - 1656995 + | IS1 ORF SSON_1578 1657726 - 1657520 - | unknown prophage protein TERM 2045 1657880 - 1657896 + H 81 -3.7 -5.4505 | opp_overlap 1657883, overlap 1657883 TATTTTTTTTGATGT AAATAGC ATC GCTATTG TTTTTTGTTGGGGCA TERM 2046 1657883 - 1657893 + H 78 -5.4 -4.81306 | opp_overlap 1657883, overlap 1657880 TTTTTTTGATGTAAA TAGC ATC GCTA TTGTTTTTTGTTGGG TERM 2047 1657933 - 1657920 - H 100 -8.1 -5.4505 | opp_overlap 1657920 TGGGGCAAGAAAAAA CCACC CTAA GGTGG TTCTGTCGGCGGGAA TERM 2048 1658149 - 1658168 + H 74 -3.5 -4.92385 | overlap 1658151 CAATTCGAATTTTCA TTCTGCG TGCTGC CGCGGGA TTTTCTTTAGCTATG SSON_1579 1659328 - 1659753 + | hypothetical protein TERM 2049 1660337 - 1660298 - g 70 -4.3 -4.52347 | gap 1, overlap 1660300 1660303 TAAAGAAGATCAAAA CACTATGGTCCATGGCGT AAAAA ACGCCACGAACCAG-GCA GGGGATGTTCAGACC TERM 2050 1660333 - 1660303 - g 86 -14.1 -2.97995 | overlap 1660300 1660298 AAGATCAAAACACTA TGGTCCATGGCGT AAAAA ACGCCACGAACCA GGCAGGGGATGTTCA SSON_1580 1659825 - 1660889 + | unknown prophage protein SSON_1581 1660896 - 1661642 + | putative replication protein SSON_1582 1661664 - 1662389 + | unknown prophage protein TERM 2051 1664032 - 1664016 - g 72 -5.8 -4.36993 | overlap 1664019 AATGTTAAAAAAAGA CAAGGG GTCTT CCCCTG AATGGATGTTGAGGA TERM 2052 1664030 - 1664019 - g 72 -7.2 -4.2757 | overlap 1664016 GTTAAAAAAAGACAA GGGG TCTT CCCC TGAATGGATGTTGAG TERM 2053 1664654 - 1664639 - g 70 -10.4 -3.1883 | AAAAAGGTGGAGCAA CGTGGC TTTT GCCACG CGTTAAAGATGATGC SSON_1583 1663456 - 1665288 + | putative methylase SSON_1584 1665285 - 1666367 + | putative restriction endonuclease SSON_1585 1666769 - 1667272 + | IS1 ORF ydfI 1667336 - 1668796 + | putative oxidoreductase TERM 2054 1668825 - 1668802 - T 100 -11.8 -5.63103 | gap 1, overlap 1668806 CGTGAAGTAAAAAAA GCAATGCCGCC ATC GGCGGCATT-C ACACGCTTAGTTCAT TERM 2055 1668822 - 1668806 - T 100 -13.7 -4.07651 | overlap 1668802 AAGTAAAAAAAGCAA TGCCGCC ATC GGCGGCA TTCACACGCTTAGTT SSON_1587 1669035 - 1668832 - | hypothetical protein TERM 2056 1669203 - 1669180 - R 90 -13.2 -3.63922 | overlap 1669167 1669178 AGGCGGGGGAAAAGA CTCTCACCCC GGAT GGGATGAGAG GAAATGAATTACTCT ydfH 1669898 - 1669212 - | hypothetical protein TERM 2057 1669978 - 1669961 - R 84 -10.5 -3.8591 | TGTGACAAGCAATAA CCCGGCA GTTA CGCCGGG TATAAAAATTACTGA ydfG 1670733 - 1669987 - | 3-hydroxy acid dehydrogenase dcp 1670870 - 1672915 + | dipeptidyl carboxypeptidase II TERM 2058 1672964 - 1672917 - T 79 -8.5 -4.2074 | gap 2, opp_overlap 1672923 1672927, overlap 1672919 1672926 1672927 GCTTGAACATATAAA CACCACCAATGGCTGGCCTGGGG ATAT CGCCAGGCCAGCC-T-GGTTATA GCAGTAATTGCAGCA TERM 2059 1672962 - 1672919 - T 76 -8.9 -3.70043 | gap 2, opp_overlap 1672923 1672927, overlap 1672917 1672926 1672927 TTGAACATATAAACA CCACCAATGGCTGGCCTGGGG ATAT CGCCAGGCCAGCC-T-GGTTA TAGCAGTAATTGCAG TERM 2060 1672923 - 1672959 + T 86 -13 -3.32268 | gap 1, opp_overlap 1672919 1672917 1672926 1672927, overlap 1672927 ACATATAAACACCAC CAATGGCTGGCCTGGGG ATAT CGCCAGGCCAGCC-TGG TTATAGCAGTAATTG TERM 2061 1672957 - 1672926 - T 100 -15.8 -3.31691 | opp_overlap 1672923 1672927, overlap 1672919 1672917 1672927 TATAAACACCACCAA TGGCTGGCCTGGGG ATAT CGCCAGGCCAGCCT GGTTATAGCAGTAAT TERM 2062 1672927 - 1672956 + T 100 -19.3 -2.83271 | opp_overlap 1672927 1672926 1672919 1672917, overlap 1672923 ATAAACACCACCAAT GGCTGGCCTGGGG ATAT CGCCAGGCCAGCC TGGTTATAGCAGTAA TERM 2063 1672956 - 1672927 - T 100 -19.3 -2.58292 | opp_overlap 1672923 1672927, overlap 1672926 1672919 1672917 ATAAACACCACCAAT GGCTGGCCTGGGG ATAT CGCCAGGCCAGCC TGGTTATAGCAGTAA ydeJ 1673478 - 1672960 - | competence damage-inducible protein A TERM 2064 1673415 - 1673387 - G 84 -13.9 -2.55074 | opp_overlap 1673383 GTTAAGCGTAATTGA TCCGCGATAAGTC TTT GACTCAACGCGGA TGTCAGGTTTTCAAT TERM 2065 1673859 - 1673832 - g 74 -7.6 -4.07885 | overlap 1673835 CAGGGCGGTTTAAAA CAGGATGCAGCG CCAC CGCCGCCTCATG CAATAGAAGATGGCT ydeI 1673754 - 1674146 + | hypothetical protein ydeH 1674401 - 1675291 + | hypothetical protein TERM 2066 1675409 - 1675426 + F 100 -10.5 -5.76949 | CCATGCAAGCATTCA CCGCCGG TTTA CTGGCGG TTTTTTTTCGCCGTC TERM 2067 1675485 - 1675449 - f 100 -10.2 -4.82901 | gap 1, opp_overlap 1675450, overlap 1675450 1675452 TCGCCGTCATAAAAA TCAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGGT TAGGTGAGGGATTAT TERM 2068 1675484 - 1675450 - f 93 -13.7 -3.49419 | gap 1, opp_overlap 1675450, overlap 1675449 1675452 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 2069 1675450 - 1675484 + F 85 -13.7 -3.06133 | gap 1, opp_overlap 1675450 1675449 1675452 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAAC TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 2070 1675482 - 1675452 - f 93 -14.9 -3.31915 | gap 1, opp_overlap 1675450, overlap 1675450 1675449 CCGTCATAAAAATCA GGCCCCTTG-TACA CAAC TGTAACAAGGGGCC GGTTAGGTGAGGGAT SSON_1594 1675759 - 1676262 + | IS1 ORF TERM 2071 1676969 - 1676948 - g 85 -10.3 -4.1711 | opp_overlap 1676944, overlap 1676951 ATGAGCGCGAACAAA TAATGTACC AGGC GGTACATTA CGAGTTAGTTGCCAG TERM 2072 1676966 - 1676951 - g 76 -7.6 -4.20768 | opp_overlap 1676944, overlap 1676948 AGCGCGAACAAATAA TGTACC AGGC GGTACA TTACGAGTTAGTTGC celA 1676323 - 1677762 + | 6-phospho-beta-glucosidase marB 1678037 - 1677819 - | hypothetical protein TERM 2073 1677933 - 1677900 - G 77 -8.9 -4.08485 | gap 1, overlap 1677901 GTGATTTAAATCAAA CGGTGGTTGTTCCTGC GAT GGGGGAACAACCAC-G ACATTGGCACAAGAA marA 1678452 - 1678069 - | DNA-binding transcriptional activator MarA TERM 2074 1678114 - 1678102 - G 72 -4.7 -4.68424 | TAATGGATGTAAAAA GCGCG ATT CGCCC TGCATATTGGTCATC marR 1678906 - 1678472 - | DNA-binding transcriptional repressor MarR ydeB 1679118 - 1679783 + | multiple drug resistance protein MarC TERM 2075 1679801 - 1679788 - T 100 -9.5 -5.1861 | opp_overlap 1679788 CGTACCATTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT TERM 2076 1679788 - 1679801 + T 79 -9.5 -3.6707 | opp_overlap 1679788 CGTACCATTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT ydeA 1680998 - 1679808 - | sugar efflux transporter SSON_1601 1682263 - 1681148 - | hypothetical protein TERM 2077 1681828 - 1681817 - G 72 -5.8 -4.40605 | ATTCAGAAACAGAAA GAGC ACAC GCTC GACGCCGGTCTGAAA yneJ 1683221 - 1682340 - | putative transcriptional regulator LYSR-type TERM 2078 1683869 - 1683855 - g 80 -11.4 -3.35046 | overlap 1683853 CCAGGTGTTTAAAGA TGCGGG AAT CCCGCA AGGCGTATATGGCTG TERM 2079 1684310 - 1684298 - g 90 -9.1 -4.55689 | opp_overlap 1684302 1684303 ATCAGGTAGAGAAAA CCCTG GCG CAGGG TGCGCGTTTGTTACT SSON_1603 1683298 - 1684710 + | putative aldehyde dehydrogenase TERM 2080 1684759 - 1684735 - f 72 -10.8 -2.87931 | gap 1 TTCAGCTCTGATATA CTCGCAGGTCT TTTC AGACCTGCG-G TCCAGGAGTAGAAAG yneH 1684774 - 1685700 + | glutaminase SSON_1605 1686377 - 1685874 - | IS1 ORF TERM 2081 1686703 - 1686721 + H 86 -11.7 -3.524 | TCGCTCAGCACGCCA CCGCGAC CTGCT GTCGCGG TTGTCTGGCTAAGTG TERM 2082 1687034 - 1687044 + H 74 -5.4 -4.62069 | opp_overlap 1687034 TCATCTGCTACGTAA TAGC ATC GCTA TTTTTGCGCTAACCA SSON_1606 1687446 - 1687925 + | hypothetical protein uxaB 1688152 - 1689600 + | altronate oxidoreductase TERM 2083 1689620 - 1689635 + F 93 -10.4 -4.58585 | ACCGTTACTTCTGAA CCCGGT TTTG ACCGGG TTTCTTATTTCACTA TERM 2084 1690044 - 1690057 + F 72 -8.1 -3.8211 | opp_overlap 1690024 1690021, overlap 1690036 CCACCGCCAGCAGTG CCGTG ATTT CACGG TTGTTCTGAATAAAC TERM 2085 1690270 - 1690238 - f 86 -12 -3.58365 | GATCAGAGGAGATAA GCAGCACTGCCACA TTCTG TGCGGCGATGCTGC GCAACAGCTGGTAGA SSON_1610 1691928 - 1692431 + | IS1 ORF TERM 2086 1692644 - 1692611 - f 79 -8.9 -4.10161 | gap 1, overlap 1692613 GATTACGGCTGAAAA TACGATTATCGGTGGC AAT GCCACCGGT-ATCGGA ACCCTGAATGTGCAG TERM 2087 1692642 - 1692613 - f 82 -11.5 -3.64716 | gap 1, overlap 1692611 TTACGGCTGAAAATA CGATTATCGGTGGC AAT GCCACCGGT-ATCG GAACCCTGAATGTGC ydeK 1692654 - 1694867 + | hypothetical protein TERM 2088 1696117 - 1696098 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 1696080 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_1612 1695132 - 1696163 + | IS630 orf TERM 2089 1696364 - 1696388 + F 93 -14.3 -3.36452 | opp_overlap 1696364 1696356 TGGTAAACCGTATAA GCCGCATGTCG AGA TGGCATGCGGC TTAATATTGCCAACT TERM 2090 1696388 - 1696364 - f 79 -11.4 -3.39668 | opp_overlap 1696364, overlap 1696356 TGGTAAACCGTATAA GCCGCATGTC GAGAT GGCATGCGGC TTAATATTGCCAACT TERM 2091 1696422 - 1696410 - f 73 -7.7 -4.19238 | opp_overlap 1696410 TTGCCAACTTCAAAA GGCTT TTA AAGCC TCCCTTTTATCCGCG TERM 2092 1696804 - 1696789 - g 75 -5.4 -4.62336 | ATGCGACGCGAAAAA TGCCTC GCCA GAAGCA ACAGAACAGCAAGAT hipB 1696565 - 1696831 + | DNA-binding transcriptional regulator HipB TERM 2093 1698508 - 1698477 - T 77 -9.4 -3.85165 | gap 1, overlap 1698479 CATCTGAAATTGAAA CAGGGTGTGTGTGGC ATG GCTACGCACACCC-G AGCAATTCACCAATG TERM 2094 1698507 - 1698479 - T 90 -13.1 -3.50832 | overlap 1698477 TCTGAAATTGAAACA GGGTGTGTGTGGC ATG GCTACGCACACCC GAGCAATTCACCAAT SSON_1615 1699227 - 1698607 - | IS2 ORF2 SSON_1616 1699255 - 1699461 + | IS600 ORF2 SSON_1617 1699470 - 1699694 + | IS600 ORF2 TERM 2095 1700075 - 1700055 - g 77 -9.7 -3.59979 | overlap 1700059 1700069 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 2096 1700071 - 1700059 - g 75 -6.9 -4.44046 | overlap 1700055 1700069 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_1618 1699926 - 1700405 + | IS21 ORF1 SSON_1619 1700405 - 1701202 + | IS21 ORF2 SSON_1620 1701250 - 1701519 + | IS2 ORF2 TERM 2097 1702593 - 1702556 - g 71 -3.4 -4.74103 | gap 1, overlap 1702575 TGCGTAATGGAAAAA TACTGGCTAC-GGGAGA AAATG TCTCCCTGGGGACAGTA AATAAAAGCAAAGTA SSON_1621 1701790 - 1702704 + | putative adhesin TERM 2098 1702946 - 1702927 - f 72 -5 -4.58297 | opp_overlap 1702929, overlap 1702929 GATTAAAAATAGAAA GAGAGTAG TCCC CTACTCTT ATATATCCATGTTGG TERM 2099 1702944 - 1702929 - f 71 -7.6 -3.87576 | opp_overlap 1702929, overlap 1702927 TTAAAAATAGAAAGA GAGTAG TCCC CTACTC TTATATATCCATGTT SSON_1622 1703038 - 1705317 + | putative oxidoreductase TERM 2100 1705331 - 1705361 + F 95 -12.8 -4.07306 | AATTCGCCTCCTCAT TTCTTCTGCTGT CATCCGC ACAGCAGAAGAA TTTCTCATTGACTAT SSON_1623 1705565 - 1705762 + | hypothetical protein SSON_1624 1705837 - 1706598 + | transcriptional regulator YdeO TERM 2101 1706667 - 1706647 - f 70 -9.7 -3.04089 | opp_overlap 1706646 1706645, overlap 1706646 GCGTAAGAATTAAAT GGGGCAG CCATTCC CTGCCCC GCGTTGTTTTTAGGC SSON_1625 1706999 - 1708681 + | putative sulfatase TERM 2102 1708693 - 1708714 + F 82 -11.5 -3.61715 | opp_overlap 1708687, overlap 1708694 ATAACTAAACCTTCA TGCGGCGGA TTTT TCCGCCGCC TTATTGAGCGAGATA TERM 2103 1708694 - 1708713 + F 93 -15 -2.76815 | opp_overlap 1708687, overlap 1708693 TAACTAAACCTTCAT GCGGCGGA TTTT TCCGCCGC CTTATTGAGCGAGAT SSON_1626 1708718 - 1709890 + | putative enzyme TERM 2104 1709944 - 1709969 + F 83 -10.5 -3.80841 | opp_overlap 1709943 1709942 1709946 ATGACCTTAACAAGG CACCCGACA TAAATTCC TGTCGGGTG TTTCGTCATCATCAT TERM 2105 1710416 - 1710438 + G 76 -7.6 -4.2586 | GGCAGCTTGTTCTTT GGTTCCCTGC CCT GCTGGGGATC TTTGTATTAATATCC yddA 1710187 - 1711872 + | putative ATP-binding component of a transport system TERM 2106 1711902 - 1711931 + T 89 -9.3 -4.59109 | opp_overlap 1711903 1711904, overlap 1711904 CTGCTGTACGGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2107 1711930 - 1711903 - T 81 -12.8 -3.18264 | opp_overlap 1711902 1711904, overlap 1711904 TGCTGTACGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 2108 1711904 - 1711929 + T 100 -16.3 -3.90762 | opp_overlap 1711903 1711904, overlap 1711902 GCTGTACGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 2109 1711929 - 1711904 - T 90 -16.3 -2.50816 | opp_overlap 1711904 1711902, overlap 1711903 GCTGTACGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_1628 1713259 - 1711913 - | IS4 orf TERM 2110 1713249 - 1713274 + g 73 -9.1 -3.61398 | opp_overlap 1713249 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 2111 1713274 - 1713249 - G 100 -9.8 -5.61596 | opp_overlap 1713249 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 2112 1714055 - 1714070 + G 72 -8.2 -3.85698 | opp_overlap 1714054, overlap 1714056 AACTCGCTGATAACT TCGGCG TTAC CGCCGG TTTATCGCGCCGCCA TERM 2113 1715100 - 1715084 - g 78 -7.9 -4.39989 | ATCAAATCAGCAAAA GCAGTCG TAC CGACAGC GCGACTAAAACCACC yddB 1713349 - 1715721 + | hypothetical protein TERM 2114 1716313 - 1716291 - g 81 -11.2 -3.62572 | opp_overlap 1716304 1716305, overlap 1716292 CATCAGGATGCGAAA TGGCGCACCT CTC AGGCGCGCCG CCCTTTCCTGCTGGC TERM 2115 1716312 - 1716292 - g 90 -14.7 -2.77222 | opp_overlap 1716304 1716305, overlap 1716291 ATCAGGATGCGAAAT GGCGCACCT CTC AGGCGCGCC GCCCTTTCCTGCTGG TERM 2116 1717733 - 1717714 - g 74 -7.8 -4.08767 | overlap 1717700 1717699 TTCAGGCGTTGAAAA CGCTCGAC CAGC GTCCAGCG GAGAAATTCGCCCAG TERM 2117 1718051 - 1718030 - g 90 -6.7 -5.093 | gap 1, opp_overlap 1718034, overlap 1718034 TGTAAAAGAACAAAA TGA-ACCTGT GGC ACAGGTTTCA CAGTGGAAGCGTTAT TERM 2118 1718046 - 1718034 - g 72 -7.7 -3.89307 | opp_overlap 1718034, overlap 1718030 AAAGAACAAAATGAA CCTGT GGC ACAGG TTTCACAGTGGAAGC pqqL 1715766 - 1718561 + | putative peptidase TERM 2119 1718598 - 1718562 - f 76 -8.7 -4.18506 | opp_overlap 1718567 1718568 1718585, overlap 1718565 1718568 TTATTGCCAAAATAA TAACAGCCCCGTCAACA CAT CGTTGGCGGGGATTTTA GCAATATTCGCCATT TERM 2120 1718567 - 1718593 + F 83 -10.1 -4.14472 | opp_overlap 1718565 1718562 1718568, overlap 1718568 1718585 GCCAAAATAATAACA GCCCCGTCAAC ACATC GTTGGCGGGGA TTTTAGCAATATTCG TERM 2121 1718592 - 1718568 - f 77 -12.1 -2.80636 | opp_overlap 1718567 1718568 1718585, overlap 1718565 1718562 CCAAAATAATAACAG CCCCGTCAACA CAT CGTTGGCGGGG ATTTTAGCAATATTC TERM 2122 1718568 - 1718592 + F 85 -13.6 -3.08201 | opp_overlap 1718568 1718565 1718562, overlap 1718567 1718585 CCAAAATAATAACAG CCCCGTCAAC ACATC GTTGGCGGGG ATTTTAGCAATATTC TERM 2123 1718585 - 1718611 + F 74 -3.7 -5.01497 | opp_overlap 1718568 1718565 1718562, overlap 1718568 1718567 CCGTCAACACATCGT TGGCGGGGATT TTAGC AATATTCGCCA TTTTTATGTAATAAT gadB 1718923 - 1720323 + | glutamate decarboxylase isozyme TERM 2124 1720342 - 1720371 + F 82 -11.5 -3.57387 | opp_overlap 1720353 1720357, overlap 1720345 CGTTTAACGGTAACG GTGTCCCGAAACG AACC CGTTTCGGGATAA TTTCCAAAGTCTGTT TERM 2125 1720345 - 1720368 + F 93 -15.4 -2.91322 | opp_overlap 1720353 1720357, overlap 1720342 TTAACGGTAACGGTG TCCCGAAACG AACC CGTTTCGGGA TAATTTCCAAAGTCT TERM 2126 1720437 - 1720409 - f 76 -7.6 -4.30416 | overlap 1720411 ATTAGCAACGGAAAA TATTGTTCTGAA TACGC TTCAGAACAAAA CAGGTGCGGTTCCGA TERM 2127 1720435 - 1720411 - f 83 -10.2 -3.75051 | overlap 1720409 TAGCAACGGAAAATA TTGTTCTGAA TACGC TTCAGAACAA AACAGGTGCGGTTCC TERM 2128 1720612 - 1720629 + G 75 -5.5 -4.67256 | TTTCATTAGTCTTCT TCCTGCT ATTA GGCGGGA TTTTATGGTTTATTC TERM 2129 1721460 - 1721447 - g 71 -3.1 -4.8667 | gap 1, opp_overlap 1721452, overlap 1721448 1721449 CACAGCGCAGAAAAA CCTGCT GCC AGC-GG CATTCGCTAAAATGA xasA 1720479 - 1722014 + | acid sensitivity protein TERM 2130 1722040 - 1722062 + F 100 -13.5 -4.77438 | opp_overlap 1722040 ATGGTTATAAGACAA GGGAGCGAT AATTC ATCGCTCCC TTTTTCGTGCTCGCT TERM 2131 1722062 - 1722040 - f 100 -14.2 -3.75378 | opp_overlap 1722040 ATGGTTATAAGACAA GGGAGCGATA ATT CATCGCTCCC TTTTTCGTGCTCGCT SSON_1633 1722145 - 1723464 + | hypothetical protein TERM 2132 1723479 - 1723519 + F 85 -12.7 -3.34962 | opp_overlap 1723489, overlap 1723480 1723489 AACTCCCATGCTTAC TTTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACACC TTGTGAAATATCACA TERM 2133 1723480 - 1723518 + F 90 -16.2 -2.60763 | opp_overlap 1723489, overlap 1723479 1723489 ACTCCCATGCTTACT TTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACAC CTTGTGAAATATCAC TERM 2134 1723489 - 1723509 + F 79 -9.7 -3.66028 | opp_overlap 1723489, overlap 1723480 1723479 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 2135 1723509 - 1723489 - f 75 -9.7 -3.62597 | opp_overlap 1723489 1723480 1723479 CTTACTTTGTAACAA GCCGGTG CTTTACC CACCGGC TTGTTACACCTTGTG TERM 2136 1723782 - 1723792 + F 77 -6.8 -4.44548 | GCAGTTAGTCAATCT CGCA CGT TGCG TTTTGATTCCGTCTG TERM 2137 1723904 - 1723863 - g 70 -5.9 -4.20834 | gap 1, opp_overlap 1723865, overlap 1723865 TTTAAAAGAATGAAA GATGAGTGGACCGGACTTGT CGA ACAGG-CAGATCCACTCATT CGTGCTAAAGCCGCG SSON_1634 1723836 - 1725218 + | hypothetical protein TERM 2138 1725266 - 1725279 + G 90 -4.5 -5.40072 | opp_overlap 1725266 AACCGATGCGGAAAA TGCCG CCGA TGGCA TTTTTTTCCCCGCCC TERM 2139 1727416 - 1727398 - g 70 -4.6 -4.5852 | opp_overlap 1727398, overlap 1727400 TAACGGAAATCAAAA TTGACAAA AGT TTTGTCGA TCGTTGTCTGACGGA SSON_1635 1725219 - 1727642 + | cAMP phosphodiesterase TERM 2140 1727656 - 1727669 + F 93 -9.5 -4.55798 | GACAAATTCCTCTCG CCCGC ACTC GCGGG TTTTCATTTAACGTG SSON_1636 1727901 - 1728482 + | D-alanyl-D-alanine dipeptidase SSON_1637 1728496 - 1730046 + | putative hemin-binding lipoprotein TERM 2141 1730752 - 1730795 + G 71 -3 -4.73682 | gap 1, overlap 1730756 1730758 ATTGAGTGAAGACTA CATTCGTACCGCCCGGGCCAG CGG CTTGCCCGGCTGGTAT-ATCG TTTTATGTTATGCGC TERM 2142 1730758 - 1730790 + G 89 -14.1 -3.18381 | overlap 1730756 1730752 TGAAGACTACATTCG TACCGCCCGGGCCAG CGG CTTGCCCGGCTGGTA TATCGTTTTATGTTA SSON_1638 1730048 - 1731070 + | putative transport system permease protein TERM 2143 1731520 - 1731530 + G 75 -6.8 -4.41616 | GCACTGGCTGCCGCT CTCG GGC CGAG TTTATTTAACGCCAT SSON_1639 1731067 - 1731963 + | ATP-dependent peptide transporter membrane subunit SSON_1640 1731960 - 1732946 + | putative ATP-binding component of a transport system SSON_1641 1733125 - 1733865 + | putative ATP-binding component of a transport system TERM 2144 1733905 - 1733878 - T 86 -11.3 -3.67558 | TAGAGATGCTAACAA CGCATCAGGCA TTCACG CGCCTGACGCG TCATCCGGCAATGCT osmC 1734352 - 1733921 - | osmotically inducible protein SSON_1643 1734975 - 1735478 + | IS1 ORF rpsV 1735790 - 1735927 + | 30S ribosomal subunit S22 TERM 2145 1735960 - 1735981 + F 100 -13.1 -5.71295 | opp_overlap 1735960 TCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTGTTTTTATCT TERM 2146 1735981 - 1735960 - f 95 -13.1 -3.82031 | opp_overlap 1735960 TCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTGTTTTTATCT TERM 2147 1736448 - 1736458 + G 72 -6.8 -4.2074 | overlap 1736441 AGATCTACCGCCGTT CACG CGG CGTG TTTATCTCTTACCAG TERM 2148 1736867 - 1736839 - g 95 -6.8 -5.40072 | gap 1 CTTTGCTCAAAAAAA TGCGAT-GCCGTT ACTT AACCGCTATCGCA ATGAAATTTGTTCTT TERM 2149 1737408 - 1737418 + G 72 -8.2 -3.75169 | opp_overlap 1737394, overlap 1737395 ACGCGCTGGTCGCCA CGGG CAG CCCG TTTAATCCAGTGGTA sfcA 1736057 - 1737781 + | malate dehydrogenase TERM 2150 1737786 - 1737813 + F 79 -7.6 -4.37534 | opp_overlap 1737782, overlap 1737787 1737788 CCTCCATCTAAGCCT GCGCCCGGTAGT GAAG GCTACCGGGCAA TTTTCCTCTCCCTTT TERM 2151 1737787 - 1737812 + F 77 -11.1 -3.21436 | opp_overlap 1737782, overlap 1737786 1737788 CTCCATCTAAGCCTG CGCCCGGTAGT GAAG GCTACCGGGCA ATTTTCCTCTCCCTT TERM 2152 1737788 - 1737811 + F 86 -14.6 -2.52138 | opp_overlap 1737782, overlap 1737787 1737786 TCCATCTAAGCCTGC GCCCGGTAGT GAAG GCTACCGGGC AATTTTCCTCTCCCT yddM 1738985 - 1739347 + | hypothetical protein TERM 2153 1739371 - 1739352 - T 91 -6.4 -5.4833 | TTACGCAATAAAAAA TGGCACCT TATA AAGCGCCA TTTGAAACTGATGAC TERM 2154 1739555 - 1739524 - T 86 -13.9 -3.21395 | opp_overlap 1739530, overlap 1739530 ACGTTGTCTACAATA TGAAAATGGCGCC TTTTAC AGCGCCATTTTCA GCTTAAAGTTCAAAA TERM 2155 1739549 - 1739530 - T 77 -7.1 -4.46656 | opp_overlap 1739530, overlap 1739524 TCTACAATATGAAAA TGGCGCC TTTTAC AGCGCCA TTTTCAGCTTAAAGT fdnI 1740228 - 1739575 - | formate dehydrogenase-N subunit gamma fdnH 1741105 - 1740221 - | formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit TERM 2156 1740319 - 1740331 + g 71 -9.1 -3.5394 | opp_overlap 1740314 1740318, overlap 1740328 TGGCAATAAAGCCAG CCGCT GCC AGCGG TTTCAACGCGCCTTT fdnG 1744165 - 1741118 - | formate dehydrogenase-N, nitrate-inducible, alpha subunit TERM 2157 1743391 - 1743419 + g 90 -7.6 -4.75174 | gap 1, opp_overlap 1743387 GCGTAAAACGAGGAT CGACAACGAT-CA AGGT TGCATCGTTGTTG TTTTTCGCTTCCATC yddG 1744397 - 1745278 + | hypothetical protein TERM 2158 1745309 - 1745281 - f 95 -11.7 -4.07687 | opp_overlap 1745284, overlap 1745284 1745285 ACGTCGTGGTTAAAA TAATTGCCGGGTC TAC GGCCCGGCAGTTA ATCAGATAAATTCCG TERM 2159 1745306 - 1745284 - f 79 -9 -4.17048 | opp_overlap 1745284, overlap 1745281 1745285 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 2160 1745284 - 1745306 + F 83 -13.4 -3.1706 | opp_overlap 1745284 1745281 1745285 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT TERM 2161 1745305 - 1745285 - f 80 -12.5 -3.09908 | opp_overlap 1745284, overlap 1745284 1745281 CGTGGTTAAAATAAT TGCCGGGTC TAC GGCCCGGCA GTTAATCAGATAAAT SSON_1652 1745537 - 1746637 + | putative outer membrane porin protein TERM 2162 1746651 - 1746670 + F 100 -10.7 -5.00138 | AACGTCCTCTCCTGA CCAGCCC TTCTCT GGGCTGG TTTTTGATTTAAGTG SSON_1653 1746807 - 1747970 + | hypothetical protein TERM 2163 1749039 - 1749020 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 1749002 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_1654 1748054 - 1749085 + | IS630 orf TERM 2164 1749520 - 1749506 - T 70 -2.2 -4.91573 | opp_overlap 1749507, overlap 1749507 AAAACAGAGCAAAAA CTTAAA TTT TTTAAA TGTTTCTGGGAAGAA SSON_1655 1751291 - 1750386 - | insertion element IS2 transposase InsD TERM 2165 1752552 - 1752574 + G 72 -8.5 -3.79021 | gap 1 CTGCTGTTCCTTACC TTACCGG-GC ACAG GCTCCGGTAA TTTCATCGCCTTTTA TERM 2166 1752751 - 1752729 - g 81 -9 -4.08948 | CAAGCTCAGAAAGAA GCCATCACCG AAA CGGCGGCGGC TCTGGGCTTTATCTC TERM 2167 1752774 - 1752788 + G 85 -2.7 -5.4505 | TTTATCTCAGCCATT GGCGC AGTGG GCGGC TTTTTTATTCCGCAG narU 1751571 - 1752932 + | nitrite extrusion protein 2 TERM 2168 1753300 - 1753281 - g 76 -10.6 -3.27774 | opp_overlap 1753275 CAGCCCAATCATGAA CCTCGCGG CTGC CCGCGTGG CGCAAGTTACTCCTG TERM 2169 1753931 - 1753911 - g 77 -9.7 -3.64703 | overlap 1753914 TGGCTGGCACCGAAA CAAGGCACT GAT AGCGCCCTG GCGATGGCAATGGGC TERM 2170 1753928 - 1753914 - g 72 -7.8 -3.96216 | overlap 1753911 CTGGCACCGAAACAA GGCACT GAT AGCGCC CTGGCGATGGCAATG TERM 2171 1754237 - 1754211 - g 75 -4.5 -4.82901 | gap 1 CGCTGGGGAGAAAAA GGCAAATGGAAT CTGG AATCCATT-GCC GCCGGTAAGGAAACC TERM 2172 1755412 - 1755425 + G 72 -6.7 -4.25458 | ACGATATGAACACCT CGGAT ATGC ATCCG TTTATTCATCCGCTT narZ 1753014 - 1756754 + | cryptic nitrate reductase 2, alpha subunit TERM 2173 1756848 - 1756834 - g 75 -5.6 -4.59773 | GGTGACCTGTAAAAA CGTCTG GAC CGGACG CGAAGGCATGGAGTA narY 1756751 - 1758295 + | cryptic nitrate reductase 2, beta subunit narW 1758295 - 1758990 + | cryptic nitrate reductase 2, delta subunit, assembly function narV 1758987 - 1759667 + | cryptic nitrate reductase 2, gamma subunit yddE 1759746 - 1760639 + | hypothetical protein TERM 2174 1760722 - 1760691 - T 95 -16.6 -2.52795 | overlap 1760678 1760701 AACCGGGCTAATGTA TGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ACCTGACATAAATTA SSON_1662 1761580 - 1760735 - | putative N-hydroxyarylamine O-acetyltransferase TERM 2175 1761628 - 1761638 + H 72 -8.2 -3.80877 | opp_overlap 1761627 TAACCTGGAATAGAC GCCG CAC CGGC TATTTTGTGCGATCG SSON_1663 1761705 - 1762322 + | hypothetical protein ydcE 1762553 - 1762326 - | 4-oxalocrotonate tautomerase TERM 2176 1762486 - 1762499 + g 100 -8.1 -5.31855 | ACGTCGGTAATATCT GCAGC AAGT GCTGC TTTTTGTTGTTCGTC SSON_1665 1763387 - 1762653 - | hypothetical protein SSON_1666 1763725 - 1763375 - | hypothetical protein TERM 2177 1763420 - 1763454 + g 100 -13.6 -4.68424 | overlap 1763422 TGACATGAATTGCTC CCCTGCGGCACTCTTG TCA TAAGAGTGCCGGAGCG TTTTTCCATCAATTG TERM 2178 1763422 - 1763452 + g 90 -14.8 -2.63476 | overlap 1763420 ACATGAATTGCTCCC CTGCGGCACTCTTG TCA TAAGAGTGCCGGAG CGTTTTTCCATCAAT ydcC 1765064 - 1763928 - | putative receptor TERM 2179 1764695 - 1764730 + g 84 -7.6 -4.68424 | gap 1, opp_overlap 1764689 1764680 1764676 1764672, overlap 1764689 1764686 1764697 TGACATGAATCGCTC CCCTGCGGCGACTCTTG TCA TAAGAGT-GCCGGAGCG TTTTTCCATCAATTG TERM 2180 1765252 - 1765276 + r 80 -10.1 -3.91897 | overlap 1765254 GCTTATTACATGTTA CATGCAAAACG TCC CGTTTTGCATC TTTGTGCCTACGGCA TERM 2181 1765254 - 1765274 + r 88 -12.7 -3.5511 | overlap 1765252 TTATTACATGTTACA TGCAAAACG TCC CGTTTTGCA TCTTTGTGCCTACGG TERM 2182 1765366 - 1765379 + r 72 -6.7 -4.35461 | opp_overlap 1765366 1765364 TAGTGCAAAAAATCA GCATC ACGT GATGC TTTTCCTGCTATTAA SSON_1668 1766148 - 1765645 - | IS1 ORF TERM 2183 1766773 - 1766748 - R 71 -3.3 -4.74518 | gap 1, opp_overlap 1766756, overlap 1766749 1766763 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT SSON_1669 1767834 - 1767079 - | putative transposase subunit TERM 2184 1767625 - 1767649 + g 93 -5.8 -5.24531 | gap 1 ACGCAGCCCTTCCGG TGT-TGCCTGA TATT TCAGGCAGGCA TTTTTTCTCAACCGT TERM 2185 1767776 - 1767795 + g 100 -15 -3.76952 | CGTTGCCGTATCAGG CTCCCGGC CATC GCCGGGAG TTTCAGTTGGGTCAG SSON_1670 1769386 - 1767851 - | putative transposase SSON_1671 1769582 - 1769866 + | ISSfl2 ORF TERM 2186 1769886 - 1769873 - f 72 -8.1 -3.78934 | GCTGGGTGAGAAGAA GCTGG CAGC CCAGC TCTGCAAACTTGCGC TERM 2187 1770408 - 1770436 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SSON_1672 1770045 - 1770461 + | ISSfl2 ORF TERM 2188 1770476 - 1770496 + T 72 -4.7 -4.564 | opp_overlap 1770479, overlap 1770481 ACATGCTTGACAACT TAATAGGGG CAC CCTCTTTTA TTTTAATTTCCGCTT TERM 2189 1770481 - 1770491 + T 79 -4.6 -5.22258 | opp_overlap 1770479, overlap 1770476 CTTGACAACTTAATA GGGG CAC CCTC TTTTATTTTAATTTC SSON_1673 1774885 - 1771082 - | rhs core protein with extension TERM 2190 1774169 - 1774155 - G 78 -8.5 -4.15833 | AGCACCAGGTGAAAA CGGCG GCCCG CGCCG TCCATCACCCCCGTC SSON_1674 1776138 - 1775143 - | H repeat-containing protein TERM 2191 1775910 - 1775945 + g 70 -4 -4.68424 | gap 1, opp_overlap 1775904, overlap 1775912 TGACATGAATCGCTC CCCTGCGACGACTCTTA TCA TAAGAGT-GCCGGAGCG TTTTTCCATCAATTG SSON_1675 1779908 - 1776639 - | rhs core protein with extension TERM 2192 1776914 - 1776895 - G 73 -9.2 -3.57797 | CCTAAAGCCATAGAA GCTGCACC GACT GGGGCAGC AATGATCGTTCCATC TERM 2193 1779370 - 1779395 + g 77 -6.2 -4.61482 | gap 2 GCCGCGTCATACCCG CTGCGCGTGACG CTGC CGTC-CGC-CAG TTCTTTTTTCACCAC SSON_1676 1780601 - 1780131 - | Rhs element protein TERM 2194 1780381 - 1780364 - G 70 -6.9 -4.07687 | opp_overlap 1780364 1780339, overlap 1780339 AGCCGGGGCCGAAAA CGCCCAC CGGT GCAGGCG TCTTCGTCCGGTAGC vgrE 1782810 - 1780702 - | Rhs element protein TERM 2195 1781419 - 1781449 + g 78 -7.4 -4.32034 | AATGGTCATCTGCGT CTTCGTCCCCGGCA GGC TGCCGGGTGTGCGG TTTTCCTGGTGGTAG TERM 2196 1782111 - 1782092 - G 72 -7 -4.25104 | opp_overlap 1782092 CCTTCCTGATCAAAA CGCCCTGG CCAG CCGGGACG TTTAAAGGTGTAGTC TERM 2197 1782259 - 1782284 + g 74 -2.5 -5.03715 | gap 1, opp_overlap 1782249 1782252 1782267, overlap 1782263 1782264 ATAACGCACGGTGTC GCACAGGACCAG GCT CTGGT-CGGTAC TTTTTTGCGCGTGCT TERM 2198 1782420 - 1782430 + g 75 -6.8 -4.41494 | ACAGCGGACTCCACT CGGT CAC ACCG TTTTCCTTCAGGATC TERM 2199 1782768 - 1782747 - G 70 -5.8 -4.17878 | TCAAATGAAAGGAAA CCACCGCA AAAGCA TCCGGTGG CAGGCCGTCCACTTC SSON_1678 1783843 - 1783631 - | hypothetical protein SSON_1679 1784536 - 1783919 - | putative transferase TERM 2200 1785671 - 1785681 + G 74 -3.2 -4.9792 | AGGCGGGGCAAAGTC CGTT CGT GACG TTTTTCTCTAAACTG ansP 1784752 - 1786302 + | L-asparagine permease TERM 2201 1786310 - 1786334 + T 86 -11.4 -3.78329 | opp_overlap 1786293 1786311, overlap 1786311 CGAGCTAATTGCAAA ATTGCCCGGC TACGT GCCGGGCAAA TTTAGATTACTGACG TERM 2202 1786311 - 1786333 + T 87 -14.9 -2.86676 | opp_overlap 1786293 1786311, overlap 1786310 GAGCTAATTGCAAAA TTGCCCGGC TACGT GCCGGGCAA ATTTAGATTACTGAC TERM 2203 1786333 - 1786311 - T 100 -14.9 -4.19953 | opp_overlap 1786311 1786310, overlap 1786293 GAGCTAATTGCAAAA TTGCCCGGC TACGT GCCGGGCAA ATTTAGATTACTGAC SSON_1681 1787478 - 1786417 - | putative receptor TERM 2204 1787297 - 1787320 + g 72 -4.4 -4.72497 | overlap 1787298 TCCAGTTTGCGGCTT TGCGAAGTGG CGAG CCACAGCGCG TTTTCTTGCTGGCTA TERM 2205 1788391 - 1788376 - g 76 -4 -4.96848 | TGGCGCACAGAAAAA TTTAGC CAAT GCCAAA CTGGGCGTACGCATT SSON_1682 1787720 - 1789822 + | putative outer membrane receptor for iron transport TERM 2206 1789832 - 1789851 + F 89 -11.4 -4.06903 | GAGTAATTACCTTGA TGCCCGGT ATTT GCCGGGCA TTTACTTTAACGATT SSON_1683 1790282 - 1790584 + | IS600 ORF1 SSON_1684 1790725 - 1791438 + | IS600 ORF2 yncB 1793895 - 1792765 - | putative oxidoreductase SSON_1686 1792585 - 1792830 + | IS1 ORF yncA 1793983 - 1794501 + | putative resistance protein TERM 2207 1794914 - 1794941 + G 72 -7 -4.25283 | gap 1, overlap 1794916 AATTTTACTTGTGGT TG-GCGCCTGGTT GGT AGCCAGACGCTCA TTTTAATCAGAGGAT TERM 2208 1794916 - 1794938 + G 70 -9.8 -3.13504 | overlap 1794914 TTTTACTTGTGGTTG GCGCCTGGTT GGT AGCCAGACGC TCATTTTAATCAGAG SSON_1689 1794498 - 1794947 + | hypothetical protein SSON_1690 1795181 - 1794948 - | hypothetical protein SSON_1691 1795515 - 1795267 - | hypothetical protein SSON_1692 1796251 - 1795748 - | IS1 ORF TERM 2209 1796806 - 1796775 - R 76 -8 -4.32482 | overlap 1796776 1796778 ACTCAGAACCTAAAA CGATAGTGGCCGTC CTAT AACAGCCACTAACA TCTAACTTAATGTTT TERM 2210 1796803 - 1796778 - R 74 -10.5 -3.14977 | overlap 1796776 1796775 CAGAACCTAAAACGA TAGTGGCCGTC CTAT AACAGCCACTA ACATCTAACTTAATG SSON_1693 1798237 - 1796813 - | gamma-aminobutyraldehyde dehydrogenase SSON_1694 1799053 - 1798259 - | putative transport system permease protein TERM 2211 1798642 - 1798629 - G 79 -3.8 -5.05079 | ACAACTACACAAAAA GTCG CATGAC CGAC CACGATGGTGAAAAA TERM 2212 1799379 - 1799359 - R 75 -9.7 -3.54919 | overlap 1799347 AATGACGGCGGCAAA CGCTCAAGC GCC GCCTGAACG GGCAGGATCATGAAC TERM 2213 1799679 - 1799669 - R 71 -6.8 -4.14243 | overlap 1799670 1799676 CACGCCATTGGAAAA GCCA GAA TGGC GCTGGCGATAGTGAC SSON_1696 1800957 - 1799944 - | putative ATP-binding component of a transport system SSON_1697 1802120 - 1800975 - | putative transport protein TERM 2214 1801095 - 1801106 + g 72 -4.4 -4.63527 | opp_overlap 1801083 1801084 1801092, overlap 1801092 ATAGTTAAAACCGTT GGTT TCAC AACC TTTTTCGCCTAATAA TERM 2215 1801748 - 1801762 + g 72 -7 -4.19238 | opp_overlap 1801748 AGTCGCCTTTAACCA CGCGCG GAT CGAGCG TTTTCCAGTTGGGAA SSON_1698 1803771 - 1802365 - | multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system TERM 2216 1802623 - 1802646 + g 72 -8.2 -3.75153 | gap 1, opp_overlap 1802622 1802621 1802625, overlap 1802627 1802628 CGCAGGCAGATAACG CAGCAGTGCCT GCC AGGCAC-GTTG TTTACGTTCCGCAAG TERM 2217 1802874 - 1802862 - G 86 -9.1 -4.31688 | opp_overlap 1802867 1802868 AAGAGCAATGCAAAA CGCCA TCG TGGCG ATCCCACGCTTTCGC TERM 2218 1803541 - 1803554 + g 74 -2.3 -5.12068 | AGTGACTGGAATGAC TGGCG CTTT CGGCA TTTTTATTGCCTGTG TERM 2219 1803816 - 1803833 + r 70 -4.9 -4.44548 | opp_overlap 1803816 CGGCAGTCTATATCA GTTGTTA AAAA TGACAAC TTTTCGTTAACTGTA SSON_1699 1804287 - 1803850 - | hypothetical protein TERM 2220 1804516 - 1804499 - H 74 -7.1 -4.30177 | GAGTATATCAATAAA GTAAACA TTAG TGTTTAC CCCTATGTGTAATTT SSON_1700 1804699 - 1805001 + | IS600 ORF1 SSON_1701 1805142 - 1805855 + | IS600 ORF2 SSON_1702 1805955 - 1806185 + | hypothetical protein ydcP 1808280 - 1806277 - | putative collagenase TERM 2221 1806696 - 1806675 - G 70 -4.3 -4.56597 | gap 1, opp_overlap 1806675 GCGTTTGCGGAAAAA CCGG-CGCAG GAT CAGCAACCGG TTTACGGCTGCCGCG TERM 2222 1808282 - 1808262 - G 77 -6.1 -4.63527 | overlap 1808264 CCAGTAGCTGAAAAA TGGCGGCTA TTT TAGCCACAA GCGCGACGTTGCGAA ydcN 1808847 - 1808311 - | hypothetical protein TERM 2223 1809214 - 1809224 + r 73 -2.4 -5.18726 | ACTAACACTTAACGA AGCC ATC GGCG TTTTTATTGTCACCA TERM 2224 1809811 - 1809824 + r 71 -3.8 -4.82128 | opp_overlap 1809794, overlap 1809802 ACGTTGGCTGGCAGC TGCC GTTGCA GGCA TTTTCTATTTGCTCG SSON_1706 1810717 - 1809899 - | IS600 ORF2 SSON_1707 1810985 - 1811488 + | IS1 ORF SSON_1708 1811832 - 1811530 - | IS600 ORF1 TERM 2225 1812185 - 1812202 + r 70 -9.9 -2.94888 | overlap 1812183 1812198 TGGATCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT SSON_1709 1813394 - 1812186 - | putative virulence protein TERM 2226 1812761 - 1812774 + g 73 -3.8 -4.83615 | overlap 1812748 1812746 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG TERM 2227 1813049 - 1813080 + g 95 -10.2 -4.65895 | gap 1 CGAGCTTAACGCCCT GCGGGTAGCGGAATG CAT CATTCTG-TCCCCGC TTTTTGAATCGGGGA TERM 2228 1813107 - 1813119 + g 71 -3.4 -4.82901 | GGGAAAAGCAGCCCG CTTC CGGAA GAAG TTTTTGTAAGCCCGC TERM 2229 1813440 - 1813430 - R 76 -4.6 -5.04249 | CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT TERM 2230 1813850 - 1813869 + r 71 -7 -4.07568 | opp_overlap 1813838 1813837 AACCGCGCCTTATAT CCCCGCCC TGAA GGATGGGG TTTTACGGCGCACCG TERM 2231 1813912 - 1813893 - R 100 -13.6 -4.85599 | CGCACCGGATAAAAA GCGCCATC TAAC GATGGCGC GTCTGGAACTACTTT TERM 2232 1814508 - 1814492 - R 74 -3.7 -5.03145 | TAATTGTTTAAAAAA CCAGA ATATTTA TCTGG CTGGGTGATTTTAGA SSON_1711 1815126 - 1814623 - | IS1 ORF tehB 1816262 - 1815669 - | tellurite resistance protein TehB TERM 2233 1815723 - 1815752 + g 73 -9.2 -3.58428 | AATACGATTACCGTT GGCGTCGGTGCG GTGCAG CTCGCCGACGTC TTCATTGTATTTCAC tehA 1817251 - 1816259 - | potassium-tellurite ethidium and proflavin transporter TERM 2234 1816769 - 1816751 - G 72 -5.3 -4.56597 | gap 1, overlap 1816753 GCCTGCGCCTAAAAA CACCAGAC CGGC GTC-GGTG TAGCCCAACGCACCA TERM 2235 1817924 - 1817936 + G 77 -3.3 -5.0925 | opp_overlap 1817924 TATGCTTTTATTGAA CATCG CGC CGAAG TTTTTGATTTTGCCA SSON_1714 1817375 - 1818355 + | hypothetical protein rimL 1818886 - 1818350 - | ribosomal-protein-L7/L12-serine acetyltransferase TERM 2236 1818477 - 1818441 - G 74 -6.5 -4.5442 | opp_overlap 1818445 1818453 1818475, overlap 1818442 1818445 CCTTCAAGGATAAAA CCATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTGT CCACCCGACATTTGA TERM 2237 1818476 - 1818442 - G 72 -10 -3.3217 | opp_overlap 1818445 1818453 1818475, overlap 1818441 1818445 CTTCAAGGATAAAAC CATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTG TCCACCCGACATTTG TERM 2238 1818445 - 1818473 + g 83 -12.5 -3.28791 | opp_overlap 1818442 1818441 1818445, overlap 1818453 CAAGGATAAAACCAT TGCGCAAAGCGAC CTG GTTGCTTTGCGGA TTGTCCACCCGACAT TERM 2239 1818938 - 1818922 - R 100 -10.8 -5.00616 | GCTGTTGTTAAAAAA GCCGCC TGGCT GGCGGC TTAGGAAAGTTTACA TERM 2240 1818968 - 1818980 + r 73 -7.7 -4.13282 | ACCTCTTTGACGCTC TCCTG CTG CAGGA TTTTGAGCATCTCAT ydcH 1819116 - 1818949 - | hypothetical protein TERM 2241 1819300 - 1819277 - gR 90 -14.6 -2.90075 | TCGTGTTTAACCAGA CGGCACCTCC CGAA GAAGGTGCCG AAGAAAAAACGATTA mdoD 1820968 - 1819313 - | glucan biosynthesis protein D SSON_1717 1819189 - 1819392 + | hypothetical protein TERM 2242 1820502 - 1820490 - GT 74 -6.9 -4.21827 | opp_overlap 1820491 1820492, overlap 1820491 TTAAACACGCGAAAA CCGGC AAA GCCGA GATCGCTTTGCCCTT SSON_1719 1822536 - 1821193 - | hypothetical protein TERM 2243 1822178 - 1822161 - G 75 -5.5 -4.7078 | GTAAGGAGGTAAAAA CGCGGAA GGGA TTACGCG CCAGAGAAGCATCAT SSON_1720 1822612 - 1823676 + | putative transcriptional regulator LYSR-type trg 1825354 - 1823714 - | methyl-accepting chemotaxis protein III TERM 2244 1824624 - 1824636 + g 81 -4.8 -5.10497 | TCCTTCATCGTCAGA TCGC CACTA GCGA TTTTTTCAATCCGTT TERM 2245 1825693 - 1825654 - H 72 -9.2 -3.6217 | overlap 1825652 1825658 CGGGAATCAGAAAGA CGAAGGCCCCGACCGATA TTTC TATCAACCGAGGCCAACG AATGAACCTAGCAAT TERM 2246 1825689 - 1825658 - H 86 -11.6 -3.52009 | overlap 1825654 1825652 AATCAGAAAGACGAA GGCCCCGACCGATA TTTC TATCAACCGAGGCC AACGAATGAACCTAG SSON_1722 1825695 - 1825862 + | hypothetical protein ydcA 1826147 - 1825974 - | hypothetical protein TERM 2247 1826118 - 1826103 - G 70 -5.4 -4.38712 | GGCATCGGCATAAAA GGAAAC AAGC GTTCCC ATAAACAAAATAAGT cybB 1826922 - 1826392 - | cytochrome b561 gapC 1827111 - 1828112 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2248 1828119 - 1828144 + T 90 -10.4 -4.3534 | overlap 1828121 AAACTCTGACGCGCA CAGGCGGAGG AAAAAA CCTCCGCCTC TTTTACTCATTACGA TERM 2249 1828121 - 1828142 + T 95 -13 -3.77927 | overlap 1828119 ACTCTGACGCGCACA GGCGGAGG AAAAAA CCTCCGCC TCTTTTACTCATTAC TERM 2250 1828871 - 1828835 - T 82 -8 -4.62069 | overlap 1828836 TCGTTACGTTAAAAA TTGCCCGTTTGTGAAC CACTT GTTTGCAAACGGGCAT GACTCCTGACTTTTA TERM 2251 1828870 - 1828836 - T 79 -11.5 -3.3692 | overlap 1828835 CGTTACGTTAAAAAT TGCCCGTTTGTGAAC CACTT GTTTGCAAACGGGCA TGACTCCTGACTTTT SSON_1727 1829934 - 1829221 - | IS600 ORF2 SSON_1728 1830088 - 1830390 + | IS600 ORF1 SSON_1729 1830947 - 1830444 - | IS1 ORF SSON_1730 1831308 - 1832021 + | IS600 ORF2 SSON_1731 1832421 - 1832119 - | IS600 ORF1 ydcF 1833158 - 1832478 - | hypothetical protein hrpA 1837275 - 1833430 - | ATP-dependent RNA helicase HrpA TERM 2252 1834595 - 1834552 - G 72 -5.2 -4.57073 | opp_overlap 1834550 1834551 1834552 GACGCGGCCTAAAAA CGCTTCGGCGTAGTTTGGTG CAGG CACAAAATTACGGCGTACCG GTTTCGGCAACGATT TERM 2253 1835679 - 1835700 + g 71 -2.9 -4.7373 | overlap 1835684 CGAGGAAGTCGGATT CTTTGTCGT GGAA GCGACGATG TTTTTCGTCCGATGC acpD 1837533 - 1838138 + | azoreductase ynbD 1839481 - 1838189 - | putative enzyme SSON_1736 1841252 - 1839495 - | hypothetical protein TERM 2254 1841313 - 1841301 - R 100 -3.3 -6.17669 | AATAAAATAAAAAAA TACCG GAG CGGTG AAAATTAATGAGTCA SSON_1738 1842897 - 1842184 - | IS600 ORF2 SSON_1739 1843340 - 1843038 - | IS600 ORF1 TERM 2255 1843436 - 1843422 - H 72 -5.6 -4.45544 | opp_overlap 1843422 TGGCAGGAAGTAAAA GGCAGC GAC GATGCC TGGTTTTACACCGTT SSON_1741 1844379 - 1845284 + | insertion element IS2 transposase InsD ynbE 1846162 - 1845977 - | hypothetical protein ydbH 1848798 - 1846159 - | hypothetical protein TERM 2256 1846465 - 1846480 + g 74 -10.4 -3.51934 | overlap 1846463 CATATTGTCTTTCAC CACCGC ATCT GCGGTG TCTTTATCCAGCCGC TERM 2257 1847799 - 1847824 + g 89 -13.3 -3.39862 | CCTGTTTCGCTTCAC CGGTCAGCTGC AGAG GCAGCTGGCTG TTATCCATGCTTAAT TERM 2258 1849228 - 1849203 - g 84 -7.5 -4.66953 | opp_overlap 1849224, overlap 1849220 GGAAGAGCTGAAAAA GCACGGCGTTA AATA TATCGCCCTGC GCTGTGCCGGTTTCA ldhA 1849006 - 1849995 + | fermentative D-lactate dehydrogenase, NAD-dependent TERM 2259 1850003 - 1850025 + F 100 -14.9 -3.66018 | TGGTTTAATCTTGCC GCTCCCCTG CATTC CAGGGGAGC TTATTCAGATAATCC TERM 2260 1850300 - 1850255 - g 74 -3.3 -4.88736 | overlap 1850256 GACCAGCGATAAAAA TCCGCCAGAAATCAGCTTT GGTGAAAA AATGATGATTTCCGGCAGC ATGTGTAACCGCTTT hslJ 1850106 - 1850528 + | heat-inducible protein SSON_1746 1850791 - 1850525 - | putative cytoplasmic protein TERM 2261 1850872 - 1850887 + H 83 -4.6 -5.27769 | opp_overlap 1850840 CGTCGAGAGCTGTCC TGCGCG TTGC CCCGCA TTTTTACTTTTTTAT TERM 2262 1852060 - 1852048 - g 70 -6.9 -4.13903 | GACAGAACCAAAGAA CCCGG TGC CCAGG CAGAACCGCTCTATC TERM 2263 1852744 - 1852757 + G 77 -3.1 -5.1287 | overlap 1852742 GCCCGTATTAATACC GTCAT GCAG ATGGC TTTTTTCCATCTGAC ydbK 1851064 - 1854588 + | putative oxidoreductase, Fe-S subunit TERM 2264 1854620 - 1854649 + F 87 -7.1 -5.10064 | opp_overlap 1854625, overlap 1854622 1854625 TTACCCAATTCTAAA AAAAAGCCCGGAC GACT GTTCGGGCTTGTC TTTTTATATGTTGGA TERM 2265 1854622 - 1854647 + F 83 -9.7 -4.16832 | opp_overlap 1854625, overlap 1854620 1854625 ACCCAATTCTAAAAA AAAGCCCGGAC GACT GTTCGGGCTTG TCTTTTTATATGTTG TERM 2266 1854625 - 1854644 + F 89 -11.4 -4.16226 | opp_overlap 1854625, overlap 1854622 1854620 CAATTCTAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG TERM 2267 1854644 - 1854625 - f 100 -9.2 -5.81032 | opp_overlap 1854622 1854620 1854625 CAATTCTAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG SSON_1748 1854954 - 1856087 + | putative outer membrane protein TERM 2268 1856096 - 1856114 + F 100 -10.2 -5.03945 | GTTCTAAATCCTCCT GCCCGCTG TTA TGGCGGGC TTTTTCTGCTTATTC ynaF 1856156 - 1856662 + | putative filament protein TERM 2269 1856689 - 1856670 - f 70 -10.7 -2.55351 | opp_overlap 1856670, overlap 1856669 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2270 1856670 - 1856689 + F 100 -10.7 -4.95957 | opp_overlap 1856670 1856669 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2271 1857212 - 1857197 - f 79 -7.6 -4.4009 | opp_overlap 1857182 1857197 GGTTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG TERM 2272 1857197 - 1857212 + F 79 -7.6 -4.4522 | opp_overlap 1857197, overlap 1857182 GGTTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG sitA 1857248 - 1858162 + | Iron transport protein sitB 1858162 - 1858989 + | Iron transport protein ATP-binding component sitC 1858986 - 1859843 + | iron transport protein inner membrane component sitD 1859840 - 1860697 + | Iron transport protein inner membrane component TERM 2273 1860891 - 1860859 - T 73 -10.6 -3.10012 | gap 1, opp_overlap 1860859 1860858 AAGTTTACCAGCCAA CCGCGGCACGTTCCT GCAT ACGA-CGTGCCGCAG CTTCTGTTATTCCAC SSON_1754 1861521 - 1860898 - | hypothetical protein SSON_1755 1862899 - 1862186 - | IS600 ORF2 SSON_1756 1863342 - 1863040 - | IS600 ORF1 SSON_1757 1863935 - 1863219 - | IS21 ORF1 TERM 2274 1863474 - 1863494 + gH 77 -9.7 -3.59979 | overlap 1863470 1863478 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 2275 1863478 - 1863490 + gH 77 -6.9 -4.44046 | overlap 1863470 1863474 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_1758 1864057 - 1864359 + | IS600 ORF1 SSON_1759 1864500 - 1865213 + | IS600 ORF2 SSON_1760 1865583 - 1865254 - | IS21 ORF1 TERM 2276 1866032 - 1866013 - R 100 -10 -4.85599 | gap 1 TTCACCCCACAAAAA GCCCGCCTG AAC CAG-CGGGC AGTCATAACACTGTG SSON_1762 1866659 - 1866060 - | putative membrane protein precursor TERM 2277 1866393 - 1866421 + g 84 -3.7 -5.2112 | overlap 1866395 1866402 GTTACGCACGGAATC CTCATGCCAGCGG GTA TCGCTGTAATGCG TTTTTTGCTCATCTT TERM 2278 1866707 - 1866690 - R 100 -11.3 -5.4505 | opp_overlap 1866688 1866706 TTCTGCAATAAAAAA GGCACCA TTTC TGGTGCC CGTATCTGGGTTATA SSON_1763 1870206 - 1866727 - | host specificity protein TERM 2279 1867543 - 1867572 + g 70 -6.5 -4.18367 | CACAGCCCACATGCT GTTCAGGTTATTA TTTG TATCAACCTGAAC TTTCTGTATCTGCTG TERM 2280 1868445 - 1868470 + g 72 -9.7 -3.30441 | GCACATGCTGCACGG CGGTGATGGCA TACG TGCCGTCGTCG TTCTCACGGATACTC TERM 2281 1868515 - 1868499 - G 79 -12.3 -3.06492 | overlap 1868501 TCACGCAGCGGAACA GACGCTG GCG CAGCGTC GGCAGCTTCAGCCCC TERM 2282 1870056 - 1870076 + g 71 -3.1 -4.7497 | CGCTGTCCAGGACCG GCGTACCGT TCA GCAGCACGC TTTTTAATCCATCCA TERM 2283 1870250 - 1870227 - R 70 -9.6 -3.01125 | opp_overlap 1870232, overlap 1870232 ACGCTCCATAAACGA CAAAACCGCC CGCA GGCGGTTTCA CATAAAACATTTTGC TERM 2284 1870245 - 1870232 - R 93 -9.5 -4.64846 | opp_overlap 1870232, overlap 1870227 CCATAAACGACAAAA CCGCC CGCA GGCGG TTTCACATAAAACAT TERM 2285 1870232 - 1870245 + r 75 -9.5 -3.60098 | opp_overlap 1870232 1870227 CCATAAACGACAAAA CCGCC CGCA GGCGG TTTCACATAAAACAT SSON_1764 1870809 - 1870267 - | putative tail component of prophage SSON_1765 1871549 - 1870806 - | tail assembly protein TERM 2286 1871042 - 1871016 - G 72 -8.6 -3.83437 | opp_overlap 1871015, overlap 1871014 1871019 1871021 CGATGAACCAAAACA GCACAGCAGCAC ATC GCCCGGCTGTGC CTCTGTCAGTGCGAC SSON_1766 1872252 - 1871554 - | minor tail protein TERM 2287 1871941 - 1871921 - G 90 -9.7 -4.42653 | overlap 1871923 ACCGCATCCAGAAAA CGGGCGTAA ACC TTACGCCTG ACCACCGTTCCGCCG TERM 2288 1872028 - 1872012 - G 72 -7.9 -3.89346 | opp_overlap 1872022 CGTGCAGGTTAGAAA CCGTCAG TGT CGGACGG GCAGCACTGCCCTTG SSON_1767 1872591 - 1872262 - | putative minor tail protein TERM 2289 1872396 - 1872365 - G 100 -15.2 -3.35679 | overlap 1872383 GGCTTCCAGTCATAA GGTGGCGTCCAC TGAAATGC GCGGACGCCACC GTGCCGTTCCAGAAA SSON_1768 1872956 - 1872591 - | hypothetical protein SSON_1769 1872995 - 1873297 + | IS600 ORF1 SSON_1770 1873474 - 1873776 + | IS600 ORF1 SSON_1771 1873812 - 1874237 + | IS600 ORF2 SSON_1772 1874227 - 1874451 + | IS600 ORF2 TERM 2290 1875097 - 1875083 - T 100 -8.5 -5.64274 | opp_overlap 1875082 1875080 1875083 TCAGGTATAAAAAAA CCCGC ATAAA GCGGG CTCTTTCAAATGTCC SSON_1777 1876018 - 1875728 - | putative bacteriophage protein SSON_1778 1876617 - 1876018 - | unknown protein encoded within prophage SSON_1779 1877202 - 1877705 + | IS1 ORF TERM 2291 1877739 - 1877728 - T 85 -3.6 -5.55664 | opp_overlap 1877730, overlap 1877729 1877730 TCATTACCAAAAAAA CCGC CGAA ACGG GTTAAGTGCGGGTGC TERM 2292 1877939 - 1877954 + T 83 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 2293 1878033 - 1878083 + T 100 -12.1 -4.64844 | gap 1 TGAGACATAGATTGG GCCTCAGATTAATGTTAAGCGTCT TGCA GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTGTCTGCC TERM 2294 1878269 - 1878293 + T 74 -3.6 -4.99947 | gap 1, overlap 1878272 TTGCCATGGTAACAA CAGGTAACGGC AATT GCTGTT-TCTG TTTTGTTTCCTTCAA TERM 2295 1878306 - 1878338 + T 100 -16.5 -4.15044 | opp_overlap 1878312, overlap 1878312 CTGTTTTGTTTCCTT CAAAAACCCCGGA CCATCAA TCCGGGGTTTTTG TTTGTTAACCCCAAC TERM 2296 1878332 - 1878312 - T 95 -11.1 -4.56597 | opp_overlap 1878306 1878312 TGTTTCCTTCAAAAA CCCCGGACC ATC AATCCGGGG TTTTTGTTTGTTAAC TERM 2297 1878312 - 1878332 + T 100 -9.7 -5.47159 | opp_overlap 1878312, overlap 1878306 TGTTTCCTTCAAAAA CCCCGGA CCATCAA TCCGGGG TTTTTGTTTGTTAAC SSON_1780 1878788 - 1878423 - | unknown protein encoded within prophage SSON_1781 1879453 - 1878788 - | hypothetical protein SSON_1782 1880035 - 1879817 - | hypothetical protein TERM 2298 1880042 - 1880057 + H 77 -11.8 -2.85402 | overlap 1880050 TGTAACCATTCATTA CCGCCC TTTC GGGCGG TCTCCTGATGATTTG SSON_1783 1880718 - 1881221 + | IS1 ORF SSON_1784 1881440 - 1881742 + | IS600 ORF1 SSON_1785 1881883 - 1882596 + | IS600 ORF2 TERM 2299 1883252 - 1883242 - g 74 -2.4 -5.0809 | AACAAATTACAAAAA CGTC TGC GTCG TAACGTGGGCGAAGC TERM 2300 1883437 - 1883425 - g 84 -10.5 -3.71672 | CTCGATCAAAAGCAA CCGGG CTT CCCGG AACACGTTCTGCCCG ydaO 1883182 - 1884117 + | C32 tRNA thiolase TERM 2301 1884125 - 1884154 + T 71 -9.9 -3.21276 | overlap 1884122 1884128 TGAAATAACCAGGAT GGCGCCCGATGCG CAAG CGTATCGGGCTAC TCTTATGGAGGCCGG TERM 2302 1884128 - 1884151 + T 87 -14.6 -2.80074 | overlap 1884125 1884122 AATAACCAGGATGGC GCCCGATGCG CAAG CGTATCGGGC TACTCTTATGGAGGC dbpA 1885619 - 1884246 - | ATP-dependent RNA helicase DbpA TERM 2303 1884504 - 1884530 + g 70 -4.4 -4.52857 | opp_overlap 1884505, overlap 1884505 1884509 CGGCACAATGGAACT ATTAGCTGGCGG CGT TTGCCAGTTAAG TTTTATCTGCAACAT TERM 2304 1885907 - 1885888 - R 100 -10 -5.85178 | AACAGGCAAAAAAAA GCCGACTC ATCA AAGTCGGC GTCGTACGAATCAAT TERM 2305 1886044 - 1886061 + r 72 -2.7 -4.96848 | gap 1 AGAGTTTATTGACTT CGCT-CAA ACT TTGCGGCG TTTTTGTATACAGAC zntB 1887080 - 1886097 - | zinc transporter TERM 2306 1887704 - 1887733 + G 82 -2.9 -5.28176 | gap 1, opp_overlap 1887703, overlap 1887705 1887706 CGCTCGGCAAATTAT CAGCGCA-AAAAAC AAG GTTTTTATGCGCGC TTTTTTCTGACTAAC TERM 2307 1888103 - 1888064 - g 75 -4.3 -4.75372 | gap 3 ATTACTGAGCAAAAA CGGC-TGGAGGAGCAGC-TG GAA CATGCTGC-CCACCATGACG CGATGACCGGATTAC SSON_1790 1887275 - 1888567 + | hypothetical protein ydaL 1889151 - 1888588 - | hypothetical protein TERM 2308 1889047 - 1889022 - G 72 -10.4 -3.34227 | opp_overlap 1889039 TGAGGAAATTATCAA GCTGCAGCGT GTCGAT ACGCTGCGGC GCACGTTGGTTACGC TERM 2309 1889437 - 1889465 + r 100 -12.5 -5.63504 | CTGCTGTGTGTACTG TAGAGTCTGGCGG ATG TCGACAGACTCTA TTTTTTTATGCAGTT ydaK 1890389 - 1889481 - | putative DNA-binding transcriptional regulator TERM 2310 1891190 - 1891235 + G 81 -8.3 -4.36914 | gap 1, overlap 1891194 TTACTGCCGTGCACA TTGGCACTGGCGTAC-CTGCGG GCA CCGTGGTGTGCGGCAGTGATAA TTTTATGGCAACCAC TERM 2311 1891194 - 1891231 + G 72 -11.3 -2.50077 | gap 1, overlap 1891190 TGCCGTGCACATTGG CACTGGCGTAC-CTGCGG GCA CCGTGGTGTGCGGCAGTG ATAATTTTATGGCAA TERM 2312 1891834 - 1891846 + G 70 -10.5 -2.76404 | opp_overlap 1891829 1891830, overlap 1891832 1891832 GCCGTCGAAACGCTG GCGCG CAC CGCGC TCAATTTTCCCTGGA ydaJ 1890550 - 1891875 + | putative aminohydrolase SSON_1794 1891875 - 1893320 + | hypothetical protein SSON_1796 1894519 - 1894821 + | IS600 ORF1 SSON_1797 1894962 - 1895675 + | IS600 ORF2 ogt 1896161 - 1896676 + | O-6-alkylguanine-DNA:cysteine-protein methyltransferase TERM 2313 1896724 - 1896741 + F 76 -8.5 -4.14739 | opp_overlap 1896720 1896721 1896724 TTTTATGTAAAGTTA CCCTTAA CAAC TTAAGGG TTTTCAAATAGATAG fnr 1896871 - 1897623 + | fumarate/nitrate reduction transcriptional regulator TERM 2314 1897645 - 1897693 + F 79 -12 -3.23638 | CGCATAACTCACTAT CCTTCTGTCATATCATTAAATT TTTCT GATTTATTGATCTGGCAGAAGG TTCATCACTGTTTCA ydaA 1897775 - 1898725 + | universal stress protein UspE TERM 2315 1898745 - 1898766 + T 100 -10.1 -5.30155 | opp_overlap 1898747, overlap 1898747 TCTTCAATAACTGAC AAGGCCCGA GTTA TCGGGCCTA TTTTTTACTTACTGC TERM 2316 1898764 - 1898747 - T 88 -12.7 -3.47751 | opp_overlap 1898745 1898747 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT TERM 2317 1898747 - 1898764 + T 95 -12.7 -4.27681 | opp_overlap 1898747, overlap 1898745 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT ynaJ 1899032 - 1898775 - | hypothetical protein TERM 2318 1899007 - 1898983 - G 70 -6.5 -4.19974 | opp_overlap 1898988, overlap 1898988 AAAACCGCCAACAAA CCAAAGAGAAA TTT TTTCCCTTTCG CTGACTTCAGTTTCG SSON_1803 1899979 - 1899476 - | IS1 ORF TERM 2319 1900957 - 1900978 + r 70 -5.1 -4.43877 | overlap 1900953 ACGGTATGGGCTGAA TGGCTTGCT GCAC AGCAAGACG TTTATTTGAAGATTA TERM 2320 1901124 - 1901097 - R 83 -14.2 -2.74525 | overlap 1901094 1901113 CTAAATCAGACATCA CTGGCGTTATCC ACAA GGGTAACGCCAG TTCCCATCACATCAA SSON_1804 1902770 - 1901136 - | putative transport periplasmic protein TERM 2321 1901744 - 1901754 + g 70 -6.8 -4.09864 | opp_overlap 1901743 1901744 CATCTGGTGTAAAAT GCCA CGC TGGC TTTTCGCCCGTCCCT TERM 2322 1902510 - 1902524 + g 70 -7.1 -4.11884 | CTGAGTCGCAACGCC GGGGA CAATC TCCCC TTTCTCGTTCTGATT ycjZ 1903985 - 1903086 - | putative transcriptional regulator LYSR-type SSON_1806 1904111 - 1905043 + | hypothetical protein SSON_1807 1905043 - 1905546 + | putative dienelactone hydrolase and related enzymes SSON_1808 1905769 - 1906272 + | IS1 ORF TERM 2323 1906465 - 1906439 - g 70 -5 -4.4891 | CTGACTACTATAAAA CACCACGCGG GCAACAA CCGGGAGGTG CGACAAAAATGTTGT TERM 2324 1906713 - 1906727 + G 74 -2.8 -5.00616 | AGTTCAGGAGGCGCT GGAAAA AGT TATTCC TTTTTTCAACACCCA SSON_1809 1906303 - 1906752 + | hypothetical protein SSON_1810 1906770 - 1907408 + | hypothetical protein TERM 2325 1907428 - 1907452 + T 76 -7.9 -4.22591 | opp_overlap 1907422, overlap 1907422 ATTAAATAGTTACCA TCGTAATGTAC TAT GTGCAGTACGA TTTATTAAACTTATT TERM 2326 1907667 - 1907654 - T 72 -5.3 -4.63932 | TAGCGTTGAAGAAAA GGATT TGAT AATCC GCAAAATTTGCACAA SSON_1811 1908210 - 1907707 - | IS1 ORF TERM 2327 1908514 - 1908529 + G 73 -11.8 -2.71712 | overlap 1908513 CCGTAACCCGCCCAC GCGCCG AACG CGGCGC ATTTCCGCCCGGAAC TERM 2328 1908924 - 1908888 - g 78 -9.3 -3.91144 | opp_overlap 1908889 1908914, overlap 1908889 CTGACAGGTGACAAA CCTGGCTCAGAACCTGA AAC CCAGGCGCTGTGCCAGC TTATACACCGCATTC TERM 2329 1908923 - 1908889 - g 78 -12.8 -2.94365 | opp_overlap 1908889 1908914, overlap 1908888 TGACAGGTGACAAAC CTGGCTCAGAACCTGA AAC CCAGGCGCTGTGCCAG CTTATACACCGCATT ycjI 1908495 - 1909223 + | murein peptide amidase A ycjG 1910163 - 1909255 - | putative muconate cycloisomerase I tpx 1910282 - 1910788 + | thiol peroxidase TERM 2330 1910783 - 1910837 + T 72 -8.9 -3.63862 | gap 2, opp_overlap 1910783 1910789 1910794, overlap 1910787 1910796 CTGGCTGTACTGAAA GCATAAGT-T-AATATGCCTGATGGTG TTG CACCATCAGGCATATTCGCGCTTACTC TTCGTTCTTCTTCTG TERM 2331 1910835 - 1910783 - T 86 -12.1 -3.64703 | opp_overlap 1910783 1910787 1910796, overlap 1910789 1910794 CTGGCTGTACTGAAA GCATAAGTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCGCGCTTAC TCTTCGTTCTTCTTC TERM 2332 1910787 - 1910831 + T 90 -13.7 -3.4382 | opp_overlap 1910783 1910789 1910794, overlap 1910783 1910796 CTGTACTGAAAGCAT AAGTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCGCGC TTACTCTTCGTTCTT TERM 2333 1910829 - 1910789 - T 100 -18.5 -3.61609 | opp_overlap 1910787 1910783 1910796, overlap 1910783 1910794 GTACTGAAAGCATAA GTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCGC GCTTACTCTTCGTTC TERM 2334 1910824 - 1910794 - T 100 -21.4 -3.27601 | opp_overlap 1910787 1910783 1910796, overlap 1910789 1910783 GAAAGCATAAGTTAA TATGCCTGATGGTG TTG CACCATCAGGCATA TTCGCGCTTACTCTT TERM 2335 1910796 - 1910822 + T 100 -19.6 -3.06737 | opp_overlap 1910794 1910789 1910783, overlap 1910787 1910783 AAGCATAAGTTAATA TGCCTGATGGTG TTG CACCATCAGGCA TATTCGCGCTTACTC tyrR 1912373 - 1910832 - | DNA-binding transcriptional regulator TyrR SSON_1816 1913037 - 1912534 - | IS1 ORF ycjF 1914358 - 1913297 - | hypothetical protein ycjX 1915752 - 1914355 - | putative enzyme TERM 2336 1916130 - 1916140 + G 79 -4.6 -4.98522 | CGACCAAAACTACGG CGGG TAA TCCG TTTTTCTCTGAAGTT ycjW 1915907 - 1916905 + | putative LACI-type transcriptional regulator TERM 2337 1916923 - 1916964 + T 95 -12.3 -3.92373 | ACCAGCTACCTTGCC TGAATGCCGGATGCGATGC TAGC GCATCTTATCCGGCCTACA TTTATAGATCGGATA SSON_1821 1918295 - 1917792 - | IS1 ORF ycjU 1919937 - 1919278 - | putative beta-phosphoglucomutase ycjT 1922201 - 1919934 - | hypothetical protein ycjS 1923253 - 1922198 - | putative dehydrogenase TERM 2338 1923143 - 1923121 - G 100 -15.6 -3.53012 | opp_overlap 1923112 CCTGCGCCTGGGAAA GGCGGCTGTC ACA GACAGCCACC AGTTCCAGATCGTTG SSON_1826 1924051 - 1923263 - | putative transient receptor potential locus TERM 2339 1923889 - 1923900 + g 77 -7.2 -4.58308 | CGCAGGCGGTGGTCA CCGG TAAA CCGG TTTCTTTGATTGCTG ycjQ 1925121 - 1924069 - | putative oxidoreductase TERM 2340 1924980 - 1925008 + g 76 -11 -3.40597 | opp_overlap 1924972, overlap 1924978 CGATAAACGGGCTGG CGGCGCGGAAGT CGACC ACTTCCGTTCCG TGTTTCGGTGCGCCG TERM 2341 1925471 - 1925507 + r 89 -10.9 -4.11216 | CCATCCATCATCGCC GCTTCTTCGATCTCATC GGG GATGGTGTCGAAGTAGC TTTTCAGCATAAACA ycjO 1926623 - 1925742 - | putative binding-protein dependent transport protein SSON_1830 1927954 - 1926644 - | putative transport periplasmic protein TERM 2342 1926888 - 1926904 + g 76 -7.9 -4.15044 | TTGTCTTTCCAGGTG GCGGTAG TGA CAACCGC TTTATTCACCGGCAG TERM 2343 1928428 - 1928417 - R 78 -5.8 -4.75309 | GGAAACTTAACAAAA TCGC ATGG GCGA GAATAAACCTGGCGC TERM 2344 1929694 - 1929679 - R 100 -11.8 -6.02914 | GTGACAGAAAAAAAA CGGCGC ATAA GCGCCG CTCATGGTGAATTCT pspE 1930025 - 1929711 - | thiosulfate:cyanide sulfurtransferase (rhodanese) pspD 1930321 - 1930100 - | peripheral inner membrane phage-shock protein pspC 1930689 - 1930330 - | DNA-binding transcriptional activator PspC pspB 1930913 - 1930689 - | phage shock protein B pspA 1931635 - 1930967 - | phage shock protein PspA TERM 2345 1931052 - 1931062 + g 82 -3.2 -5.27335 | opp_overlap 1931048 AGTTCGGCAAACTGA TCGT CCA GCGA TTTTTGTTTACCGAA TERM 2346 1932680 - 1932666 - g 93 -8.6 -4.77438 | opp_overlap 1932665 1932668, overlap 1932652 ATGCAGCAGGAAAAA GAGTTG CTG CAACTC AGTTTGCAAAAGGGG pspF 1931802 - 1932779 + | phage shock protein operon transcriptional activator TERM 2347 1933305 - 1933287 - T 78 -11.6 -3.05816 | GTAGGTGCCACCCAA CCCGCCCG GCG CGGGCGCG TCCATAATATTCGCG ordL 1935480 - 1934200 - | oxidoreductase TERM 2348 1935019 - 1935030 + g 70 -5.8 -4.1822 | overlap 1935018 GGCGTTAGCGTCCAG CAGC TCCA GCTG TTTATTGCCGTAGCG aldH 1936831 - 1935482 - | aldehyde dehydrogenase TERM 2349 1936101 - 1936114 + g 77 -5.9 -4.59773 | opp_overlap 1936091 AAGATGCCTGCGGCG GTGGC GCTT GCCGC TTTTTGCAGATCCGG TERM 2350 1936809 - 1936821 + g 74 -7.7 -4.07885 | TCGATATCGACGCTC TTGCC GCG GGCAA TTTTCGCCAGCGGTG TERM 2351 1937037 - 1937051 + r 81 -8.5 -4.55295 | GGGCGCAGAGATCCC CGGGC CGCAT GCCCG TTTATTTCTGGCGAC ycjC 1937679 - 1937122 - | DNA-binding transcriptional repressor PuuR puuD 1938482 - 1937706 - | gamma-glutamyl-gamma-aminobutyrate hydrolase SSON_1843 1938604 - 1940043 + | putative glutamine synthetase TERM 2352 1941545 - 1941526 - g 71 -2.9 -4.81082 | gap 1, opp_overlap 1941527 1941528, overlap 1941527 1941528 AAGGAATGAATAAAA GCTGGAAG GATCA CTTCCA-C TATTTGCTGATGCCG ycjJ 1940292 - 1941731 + | putative amino acid/amine transport protein TERM 2353 1941740 - 1941781 + F 100 -16 -3.12351 | gap 1, opp_overlap 1941732, overlap 1941740 AACGTAATAGCCGGA TG-CGCGGCGCATTATCCT GCCTG AGGGTAACGCGCCGCGCCA TTAACTATAAAAAGA ymjA 1941865 - 1942110 + | hypothetical protein TERM 2354 1942319 - 1942287 - f 100 -15.7 -3.16039 | opp_overlap 1942296, overlap 1942274 AATCACGGGTACGAA TGTTGAACAGATGGC GAC GCCACCTGTTCAACG ACCAACCACACGGCC TERM 2355 1942515 - 1942526 + G 81 -7.2 -4.68545 | overlap 1942519 CCCGCATGCTGATAT CCGC GACA GCGG TTTTGTCTATTGCGT sapA 1942423 - 1944066 + | peptide transport periplasmic protein-like protein sapB 1944063 - 1945028 + | peptide transport permease protein-like protein TERM 2356 1945077 - 1945044 - g 91 -10.9 -4.26188 | gap 1, opp_overlap 1945043 CGTATACAGCGAAAA GCGCCCGCCGGGCACG CTG CGTACC-GCCTGGCGC AAATTTTATAGTGAC TERM 2357 1945299 - 1945320 + G 86 -10.9 -3.96892 | gap 1 TTTACTGAGCGGAGC TGCGCCAACC GTG GGT-GGCGCA TTTGTGGTGACGCTT sapC 1945015 - 1945905 + | peptide transport permease protein-like protein sapD 1945905 - 1946897 + | putative ATP-binding protein of peptide transport system TERM 2358 1946956 - 1946939 - g 77 -6.9 -4.45664 | opp_overlap 1946948 1946949 GTAATTTAAGTAAAA CGTTCCG CTAC CGGACCG GCTGGTTTCGTCGTC sapF 1946899 - 1947705 + | putative ATP-binding protein of peptide transport system TERM 2359 1947777 - 1947731 - f 100 -17.6 -2.62184 | CCTCCTTCCAGATTA TCCACCTCATTCTGACAAGA GATTAAA TCTTGTCAGAATGAGGTGAT GGATAAAATAAAATC ycjD 1947773 - 1948126 + | hypothetical protein TERM 2360 1948146 - 1948105 - f 77 -11.5 -3.20723 | gap 1 TCTGCAGGAACTGAA CCGCCGATCACCCTCACCCT GAA AGGGCGAGGGGG-CCGACCG AGCCGAATAGCTGTT fabI 1948494 - 1949282 + | enoyl-(acyl carrier protein) reductase TERM 2361 1949302 - 1949322 + F 93 -12.5 -3.71149 | opp_overlap 1949299 1949302, overlap 1949303 TCTGTTGGTAAATAT TGGGCGGCG TTC TGCCGCCCG TTATCTCTGTTATAC TERM 2362 1949303 - 1949321 + F 84 -13.8 -2.81966 | opp_overlap 1949302 1949299, overlap 1949302 CTGTTGGTAAATATT GGGCGGCG TTC TGCCGCCC GTTATCTCTGTTATA TERM 2363 1949918 - 1949929 + F 73 -4.4 -4.75309 | opp_overlap 1949918 CTGTGTGATCATTAA CCAA ATCA TTGG TTTTATTGGCTTTCA TERM 2364 1950915 - 1950902 - g 72 -4.5 -4.62336 | opp_overlap 1950902 AGTTCAGGGCAAAAA TGACC GTCT GGCCA TCGTTCCTGATCATC TERM 2365 1952303 - 1952292 - g 75 -7.2 -4.32857 | opp_overlap 1952294, overlap 1952293 1952294 TTCCTGAAAGATAAA GCCG GGAC CGGC ACCCGTTTCGCGGCG TERM 2366 1952370 - 1952381 + G 72 -7.2 -4.15222 | opp_overlap 1952369 1952370 CGTTTGGTTGATAAC GGCG CTAT CGCC TTTATTCCGGCACCT rnb 1950621 - 1952555 + | exoribonuclease II TERM 2367 1952566 - 1952590 + F 100 -13.6 -4.42062 | CGTAATCTCCTTTCA CGGCCCATTC CTCAT GGATGGGCCG TTTATTTCCCCGCTC TERM 2368 1953427 - 1953404 - f 73 -4.6 -4.87892 | gap 1 TCGCAATAAAATAAA TTTGTCCACAG CGG CAGTGG-CAAA AACGAGATTTTTTTA SSON_1856 1955190 - 1955939 + | putative DEOR-type transcriptional regulator osmB 1956208 - 1956426 + | lipoprotein TERM 2369 1956543 - 1956524 - T 100 -13.6 -3.71687 | opp_overlap 1956524, overlap 1956517 GTAAAATATTCGAAA GCCACGGA TATA TCCGTGGC TTTTTATGTTAACCG TERM 2370 1956524 - 1956543 + T 100 -13.6 -5.0916 | opp_overlap 1956524 1956517 GTAAAATATTCGAAA GCCACGGA TATA TCCGTGGC TTTTTATGTTAACCG yciH 1956881 - 1956552 - | translation initiation factor Sui1 pyrF 1957615 - 1956878 - | orotidine 5'-phosphate decarboxylase yciM 1958977 - 1957808 - | hypothetical protein TERM 2371 1958170 - 1958184 + g 70 -7.1 -4.08945 | CGCGTTGCAGGAATT CTGCC CATTC GGCAG TTTTACCCAACTGCT yciS 1959292 - 1958984 - | hypothetical protein pgpB 1960206 - 1959442 - | phosphatidylglycerophosphatase B ribA 1960376 - 1960966 + | GTP cyclohydrolase II TERM 2372 1960970 - 1960944 - T 75 -6.6 -4.44974 | overlap 1960916 1960945 CCAAAGCCGAGAAAA TGGGTCATTTGC TGA ACAAATAACCCT CTCGCATTGTGGAAT TERM 2373 1960969 - 1960945 - T 71 -10.1 -3.26262 | overlap 1960944 CAAAGCCGAGAAAAT GGGTCATTTGC TGA ACAAATAACCC TCTCGCATTGTGGAA TERM 2374 1960987 - 1961025 + T 83 -9 -4.3255 | opp_overlap 1960989, overlap 1960989 TCGCATTGTGGAATT AATTTGCTTGCCGG AAGCAAAATAA CCGGCAAGCAAATA TTTGTTACTTCAGCA TERM 2375 1960989 - 1961023 + T 93 -11.6 -3.7642 | opp_overlap 1960989, overlap 1960987 GCATTGTGGAATTAA TTTGCTTGCCGG AAGCAAAATAA CCGGCAAGCAAA TATTTGTTACTTCAG TERM 2376 1961023 - 1960989 - T 82 -11.6 -3.34344 | opp_overlap 1960989 1960987 GCATTGTGGAATTAA TTTGCTTGCCGG AAGCAAAATAA CCGGCAAGCAAA TATTTGTTACTTCAG acnA 1963705 - 1961030 - | aconitate hydratase TERM 2377 1961411 - 1961421 + g 81 -8.2 -4.29829 | opp_overlap 1961410 TTTCCCGGCAATCAC CGCC AGC GGCG TTTGTTCCTGCTTAT TERM 2378 1962043 - 1962069 + g 70 -7.3 -4.07687 | gap 2, opp_overlap 1962040 1962043 GCGCATAGGCAACCA CCAGC-GGC-GGC GAG GCCAGCCAGTTGG TTTTAACCAGCGGAT TERM 2379 1963341 - 1963302 - G 75 -7.3 -4.32034 | gap 2, overlap 1963330 TCATCATCACCAAAA CGATCGA-C-GGTCACCGA GTGG TCAATGACCAGGTCGACCG GTGAGAGCGGGTTAA TERM 2380 1963861 - 1963846 - R 93 -11.8 -3.66643 | CAAAGCAAATGACAA CCCCGC CGCA GCGGGG TCAAGGATCAGTGAG SSON_1865 1964257 - 1964078 - | hypothetical protein SSON_1866 1964412 - 1964248 - | hypothetical protein SSON_1867 1964730 - 1965233 + | IS1 ORF TERM 2381 1965469 - 1965436 - T 73 -9.7 -3.35613 | overlap 1965432 ACAAAAGAGAATATA TTCCGGCACCTTC GCTACATA AAAGGTGCCGAAA ATAACGCAAGAAATT cysB 1966457 - 1965483 - | transcriptional regulator CysB TERM 2382 1966643 - 1966611 - R 74 -10.8 -3.29121 | gap 1, opp_overlap 1966618, overlap 1966618 AAAAATAATATGCAA TAAA-AAAGGGCCGC TTTC GCGACCCTTTGTTTA TAAAAACCTGACAGA TERM 2383 1966618 - 1966635 + r 81 -8.3 -4.55295 | opp_overlap 1966611 1966618 ATATGCAATAAAAAA GGGCCGC TTTC GCGACCC TTTGTTTATAAAAAC TERM 2384 1966635 - 1966618 - R 100 -10.5 -5.49234 | opp_overlap 1966618, overlap 1966611 ATATGCAATAAAAAA GGGCCGC TTTC GCGACCC TTTGTTTATAAAAAC topA 1969264 - 1966667 - | DNA topoisomerase I TERM 2385 1968343 - 1968354 + g 90 -4.4 -5.40072 | CATACAAACGCTGCG CCAT CATC ATGG TTTTTTTCACGCCAA TERM 2386 1968460 - 1968475 + g 74 -6 -4.56775 | TGTCTTCACGTTCCA GCACGC TGTA GCGCGC TTTTTCCAGCAGACT TERM 2387 1969116 - 1969127 + g 70 -4.4 -4.58395 | GTCTTGGTGGAGGTA GAGT CGGC ACTC TTTTTGGCAGCTGAG yciN 1969644 - 1969895 + | hypothetical protein TERM 2388 1969903 - 1969922 + T 95 -11.4 -4.46775 | opp_overlap 1969903 TTGATTAAAGCAAAA CGCGAGGT CTTA GCCTCGCG TTTGTCTTTTACATC TERM 2389 1969922 - 1969903 - T 93 -10.7 -4.58773 | opp_overlap 1969903 TTGATTAAAGCAAAA CGCGAGG TCTTAG CCTCGCG TTTGTCTTTTACATC sohB 1970980 - 1969931 - | putative periplasmic protease TERM 2390 1970860 - 1970872 + g 82 -9.1 -4.2528 | TGTTGACCCGTAACT CGCCA CGC TGGCG TTTATTACGTTGAGC yciK 1971200 - 1971958 + | short chain dehydrogenase btuR 1971955 - 1972545 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2391 1972576 - 1972556 - T 84 -8.3 -4.62872 | opp_overlap 1972553 1972556 ATTAATCTGTAAAAA TGCCGGA TATGACG TCCGGCA TACTTTGATTAACCG yciL 1973457 - 1972585 - | 23S rRNA pseudouridylate synthase B TERM 2392 1973538 - 1973512 - R 75 -11 -3.01712 | opp_overlap 1973503 1973502 TGCTTTTGTGCAACA GTGAGTCAGA ACTTACA TCTGACTCAC TGATAGTAAAGTCTG TERM 2393 1974675 - 1974710 + r 70 -4.8 -4.43501 | gap 1, opp_overlap 1974674 1974682, overlap 1974677 1974677 GCTTCAACATCAAAG AGC-GAAATCCCTTCTT CAT AAGAAGGGATCTCCGTG TTTTCTGCATAACTT TERM 2394 1974677 - 1974708 + r 79 -9.6 -3.82117 | gap 1, opp_overlap 1974674 1974682, overlap 1974675 1974677 TTCAACATCAAAGAG C-GAAATCCCTTCTT CAT AAGAAGGGATCTCCG TGTTTTCTGCATAAC TERM 2395 1974702 - 1974682 - R 93 -12.7 -3.82208 | opp_overlap 1974677 1974677 1974675, overlap 1974674 CATCAAAGAGCGAAA TCCCTTCTT CAT AAGAAGGGA TCTCCGTGTTTTCTG yciO 1975468 - 1974812 - | hypothetical protein yciV 1976310 - 1975429 - | putative enzyme SSON_1878 1976448 - 1976492 + | hypothetical protein TERM 2396 1976536 - 1976554 + F 100 -8.8 -5.75342 | GCAATCAGATACCCA GCCCGC CTAATGA GCGGGC TTTTTTTTGAACAAA TERM 2397 1976609 - 1976599 - g 82 -3.2 -5.20783 | ATGCAAACACAAAAA CCGA CTC TCGA ACTGCTAACCTGCGA TERM 2398 1977166 - 1977155 - g 70 -3.6 -4.6341 | opp_overlap 1977163 ATCAGAAAAAAAACA CCCG CATT CAGG CCAGCCTGTTTGCTC trpE 1976584 - 1978146 + | anthranilate synthase component I TERM 2399 1978822 - 1978798 - g 74 -6.4 -4.46854 | gap 1, overlap 1978799 TTAGCCAACAAGAAA GCCACCAGCTG TTTT CAGC-GGTGGT GCGTGGCGAGCTGAA TERM 2400 1978821 - 1978799 - g 70 -9.9 -3.27389 | gap 1, overlap 1978798 TAGCCAACAAGAAAG CCACCAGCTG TTTT CAGC-GGTGG TGCGTGGCGAGCTGA trpD 1978146 - 1979741 + | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 2401 1981012 - 1981000 - g 86 -10.5 -3.89614 | opp_overlap 1980999 1980998 1980996 TGGAAGCGGCACAAA CCGGC TGC GCCGG ACTTGATTTTAATTC trpC 1979742 - 1981103 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 2402 1981244 - 1981226 - g 72 -5.2 -4.58395 | overlap 1981229 GTCAGCGCGCAAAAA GATCCTGA ATT TCAGGCCC AGTTCAACGACCTAC trpB 1981115 - 1982308 + | tryptophan synthase subunit beta trpA 1982308 - 1983114 + | tryptophan synthase subunit alpha TERM 2403 1983121 - 1983143 + F 95 -11.2 -4.45261 | opp_overlap 1983115, overlap 1983122 CGCAGTTAATCCCCC AGCCGCCAGT TCC GCTGGCGGCA TTTTAACTTTCTTTA TERM 2404 1983122 - 1983142 + F 90 -14.7 -3.2553 | opp_overlap 1983115, overlap 1983121 GCAGTTAATCCCCCA GCCGCCAGT TCC GCTGGCGGC ATTTTAACTTTCTTT SSON_1884 1983467 - 1983970 + | IS1 ORF TERM 2405 1984195 - 1984209 + F 85 -3.6 -5.46698 | TGTTTTTAACTGCCT GATTTT ATT GAAATC TTTTTTAGTTTTGCA TERM 2406 1984382 - 1984393 + F 100 -7.2 -5.86332 | opp_overlap 1984375, overlap 1984375 CATCACAACGCATAG CCGC GTTT GCGG TTTTTTTTGCGTTAA SSON_1885 1984562 - 1985119 + | hypothetical protein SSON_1886 1985869 - 1986525 + | unknown protein encoded within prophage TERM 2407 1986575 - 1986523 - f 88 -7.8 -5.08824 | gap 1, overlap 1986525 1986533 GCTTCAGGGAAAAAA TAGCATCCAACCGCAGCACGTTCTT GCTT AAGA-CGTGCTGCGGCATAATCCCA ATGATTACTCCCTGA TERM 2408 1986573 - 1986525 - f 76 -8.2 -4.17608 | gap 1, overlap 1986523 1986533 TTCAGGGAAAAAATA GCATCCAACCGCAGCACGTTCTT GCTT AAGA-CGTGCTGCGGCATAATCC CAATGATTACTCCCT TERM 2409 1986565 - 1986533 - f 100 -17.2 -3.16564 | gap 1, overlap 1986525 1986523 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTGCGG CATAATCCCAATGAT TERM 2410 1987665 - 1987651 - g 75 -5 -4.84642 | opp_overlap 1987661 TTCAAAGTAATAAAA CCATAA ATA TTACGG GACGTGTTAATCCCT SSON_1887 1987134 - 1987745 + | putative bacteriophage tail protein TERM 2411 1988264 - 1988254 - g 81 -6.8 -4.67641 | overlap 1988257 AGCGGAAAATGAAAA GCAG AGC CTGC TGCAGCTCGTCAGGG TERM 2412 1988316 - 1988286 - g 81 -8.3 -4.42386 | opp_overlap 1988284 1988297 TCGTCAGGGATAAAA CCCAGCTGTGG GACTCTCAG CTACAGCTGGG CATCATTTCCGATGA SSON_1888 1987898 - 1988431 + | putative tail fiber assembly protein TERM 2413 1988433 - 1988456 + T 83 -6.6 -5.08088 | opp_overlap 1988437, overlap 1988437 1988450 AACAACCAGAATGAG AGAAGGCCCG CTAT CGGGCCTTAA TTTTTATTCAGGCTT TERM 2414 1988437 - 1988452 + T 95 -11.8 -3.9407 | opp_overlap 1988437, overlap 1988433 1988450 ACCAGAATGAGAGAA GGCCCG CTAT CGGGCC TTAATTTTTATTCAG TERM 2415 1988452 - 1988437 - T 86 -11.8 -3.63046 | opp_overlap 1988433 1988437 1988450 ACCAGAATGAGAGAA GGCCCG CTAT CGGGCC TTAATTTTTATTCAG TERM 2416 1988450 - 1988469 + T 70 -5 -4.4017 | opp_overlap 1988437, overlap 1988437 1988433 AAGGCCCGCTATCGG GCCTTAAT TTTT ATTCAGGC TTTTGTGGCCATTCA SSON_1889 1988987 - 1988460 - | putative tail fiber assembly protein SSON_1890 1989342 - 1989644 + | IS600 ORF1 SSON_1891 1989785 - 1990498 + | IS600 ORF2 SSON_1892 1991246 - 1990932 - | hypothetical protein TERM 2417 1990981 - 1991002 + g 100 -13.7 -3.85817 | ATTTTTATGGTATAC CGCGCCTCT GAAC AGGGGCGCG TTTCTGGCAACAGCT TERM 2418 1991531 - 1991509 - R 100 -9.9 -5.97979 | opp_overlap 1991509 ACAACAATAAAAAAA GCCACCAGT TAAGT ACTGATGGC TCTGATAACTCATGC SSON_1893 1993470 - 1991617 - | unknown protein encoded within prophage TERM 2419 1993595 - 1993580 - H 74 -8.2 -3.94933 | GCAATTCGAAAAAGA CCGCGC AGTT GCGCAG AGTGATTACTATGGG TERM 2420 1993664 - 1993685 + H 100 -12.3 -5.40072 | gap 1 TGTTTATTCCTTGCC GCCCGCGTCT CCC AG-CGCGGGC TTTTTTTGCCCACAA TERM 2421 1993721 - 1993706 - H 100 -10.4 -4.77165 | TTGCCCACAAGAAAA CCCCTC CGGA GAGGGG CTAAAGCCGCGTATC TERM 2422 1993996 - 1993975 - H 100 -12.3 -4.72272 | gap 1, overlap 1993948 TTTCTGCAGTAAAAA GGCCCA-CCG GAG CGGATGGGCC TGGAAGGATGAGGTA SSON_1894 1994069 - 1994371 + | IS600 ORF1 SSON_1895 1994512 - 1995225 + | IS600 ORF2 TERM 2423 1995360 - 1995373 + T 72 -8.1 -3.75665 | TTTCCGATACGCCCT GCCTG CTGA CAGGC TTTCATCACATCTGA TERM 2424 1995698 - 1995681 - T 100 -10.5 -5.83822 | GACATTTAAAAAAAA GGCCCGC AAAA GCGAGCC AGGGAAAATAAGTGT TERM 2425 1995830 - 1995857 + T 72 -8.4 -3.79251 | gap 1, overlap 1995832 GGGGACTTGAACCCC GCGCAGCCAGCTT CGA AGGCTGGC-GCTC TTTCCTGATGAGCTA TERM 2426 1995832 - 1995855 + T 75 -9.6 -3.48024 | gap 1, overlap 1995830 GGACTTGAACCCCGC GCAGCCAGCTT CGA AGGCTGGC-GC TCTTTCCTGATGAGC SSON_1899 1997061 - 1996003 - | putative DNA adenine methyltransferase encoded by prophage TERM 2427 1997149 - 1997189 + r 72 -8.9 -3.53811 | opp_overlap 1997141 1997153, overlap 1997150 AACCCAACGCATGAG CAGATGGCTGGTGGGTG CCCCTAA CACCCACCAGCCGCCCA TTTACCACAAATAAA TERM 2428 1997150 - 1997188 + r 78 -12.4 -2.72144 | opp_overlap 1997141 1997153, overlap 1997149 ACCCAACGCATGAGC AGATGGCTGGTGGGTG CCCCTAA CACCCACCAGCCGCCC ATTTACCACAAATAA TERM 2429 1997185 - 1997153 - R 93 -16.3 -2.83641 | opp_overlap 1997150 1997149, overlap 1997141 CAACGCATGAGCAGA TGGCTGGTGGGTGCC CCT AACACCCACCAGCCG CCCATTTACCACAAA TERM 2430 1997225 - 1997208 - R 93 -7 -5.73978 | opp_overlap 1997207 ACCACAAATAAAAAA GCCTTC ACTGCG GAAGGC GTCTGTAACAACCGA SSON_1900 1997409 - 1997212 - | putative bacteriophage protein TERM 2431 1997551 - 1997536 - R 95 -7.5 -5.28176 | opp_overlap 1997536 1997549, overlap 1997537 TTCAGTCATAAAAAA CCCGC TCGGCG GCGGG TTGTAGAAACTCTTC TERM 2432 1997547 - 1997537 - R 72 -8.2 -3.76182 | opp_overlap 1997536, overlap 1997536 TCAGTCATAAAAAAC CCGC TCG GCGG CGGGTTGTAGAAACT SSON_1901 1998455 - 1997634 - | antitermination protein Q-like protein SSON_1902 1998832 - 1998452 - | putative endonuclease of cryptic prophage SSON_1903 1999891 - 1998833 - | hypothetical protein TERM 2433 2000385 - 2000398 + r 71 -9.5 -3.1355 | opp_overlap 2000385 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGTGGGTGCA TERM 2434 2000398 - 2000385 - R 100 -9.5 -5.77734 | opp_overlap 2000385 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGTGGGTGCA TERM 2435 2000440 - 2000461 + r 74 -11.5 -2.77416 | opp_overlap 2000437, overlap 2000435 2000435 TGACCCATCAGAGGT GGCGAGGGA TTTC TCCCCCGCC TGGTCTCTTACTCCT relF 2000624 - 2000469 - | polypeptide destructive to membrane potential TERM 2436 2000595 - 2000610 + g 86 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 2437 2000689 - 2000739 + r 100 -12.1 -4.64844 | gap 1 CCGTTCATAGATTGA GCCTCAGATTAATGTTAAGCGTCT TGCC GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC TERM 2438 2001192 - 2001206 + r 71 -10 -3.1211 | overlap 2001179 2001177 GATTGTGCCCGGTAT GCACAG TCT CTGTGC TTCAATAGTCTCCTC TERM 2439 2001357 - 2001368 + r 71 -7.2 -4.0896 | overlap 2001365 TCCATTTGTTCACCA CGGG TAAG CCCG TTTTCAAGCGGGTTT TERM 2440 2001365 - 2001380 + r 80 -6.8 -4.7254 | overlap 2001357 TTCACCACGGGTAAG CCCGTT TTCA AGCGGG TTTTTAATGAACAAT SSON_1905 2001665 - 2001435 - | unknown protein encoded within prophage SSON_1906 2002390 - 2001677 - | IS600 ORF2 SSON_1907 2002833 - 2002531 - | IS600 ORF1 SSON_1908 2003609 - 2004112 + | IS1 ORF SSON_1909 2004171 - 2004383 + | unknown protein encoded within prophage TERM 2441 2005029 - 2005011 - T 91 -8.2 -5.07053 | opp_overlap 2005011 AAGGAGTGGAAAAAA CTGGTCAT TTG ATAACCAG TTTTGCAGAGGTTTT yciD 2005693 - 2005055 - | outer membrane protein W TERM 2442 2005634 - 2005616 - G 82 -3 -5.28176 | overlap 2005618 TGCACGCATAAAAAA TTCGCCTG CTT CATGCGCA AAGGCACTGCCAGAG yciC 2006050 - 2006793 + | hypothetical protein TERM 2443 2007132 - 2007116 - g 72 -4.3 -4.7254 | overlap 2007117 ATGGGTGATGAAAAA GCCGCTA ATT CAGCGGA TGCTGGGTAAAGAAC yciB 2006823 - 2007362 + | intracellular septation protein A TERM 2444 2007414 - 2007448 + F 90 -10.8 -4.22948 | overlap 2007420 CCTCTGTTCTCCTCA GGAAAATCATAGTAGC ATC GCGCCTGTGATTTTCC TTTTAAGTCGGTTTT yciA 2007467 - 2007865 + | acyl-CoA thioester hydrolase TERM 2445 2007899 - 2007866 - T 100 -16.9 -3.14564 | opp_overlap 2007868 2007875, overlap 2007868 2007875 TTACCTGTTGAGTAA TAGTCAAAAGCCTCC GGTC GGAGGCTTTTGACTT TCTACTTACTGAATT TERM 2446 2007897 - 2007868 - T 100 -19.5 -3.13522 | opp_overlap 2007868 2007875, overlap 2007866 2007875 ACCTGTTGAGTAATA GTCAAAAGCCTCC GGTC GGAGGCTTTTGAC TTTCTACTTACTGAA TERM 2447 2007868 - 2007897 + T 100 -19.5 -4.08144 | opp_overlap 2007866 2007868 2007875, overlap 2007875 ACCTGTTGAGTAATA GTCAAAAGCCTCC GGTC GGAGGCTTTTGAC TTTCTACTTACTGAA TERM 2448 2007890 - 2007875 - T 90 -10.4 -4.29325 | opp_overlap 2007875 2007868, overlap 2007868 2007866 GAGTAATAGTCAAAA GCCTCC GGTC GGAGGC TTTTGACTTTCTACT TERM 2449 2007875 - 2007890 + T 93 -10.4 -4.40173 | opp_overlap 2007868 2007866 2007875, overlap 2007868 GAGTAATAGTCAAAA GCCTCC GGTC GGAGGC TTTTGACTTTCTACT tonB 2008624 - 2007905 - | transport protein TonB TERM 2450 2007991 - 2008001 + g 81 -6.8 -4.62069 | GCTCATAACGCCATC TGCG CAT CGCA TTTTTCACCTCACGC TERM 2451 2009931 - 2009913 - g 76 -3.9 -4.90266 | TTGATGAACTAAAAA TTCAGCT TAAGG AACTGAA CCAGAAGCGCACAGA SSON_1915 2008715 - 2010235 + | hypothetical protein TERM 2452 2010242 - 2010257 + F 100 -10.4 -5.04597 | CAACTGTAATTTTCA GGGGCT ATGA AGCCCC TTTTTATGTCTCAAT SSON_1916 2011066 - 2011971 + | insertion element IS2 transposase InsD SSON_1917 2012982 - 2012548 - | hypothetical protein SSON_1918 2013707 - 2012994 - | IS600 ORF2 SSON_1919 2014150 - 2013848 - | IS600 ORF1 TERM 2453 2015710 - 2015691 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 2015673 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_1920 2014725 - 2015756 + | IS630 orf SSON_1921 2017039 - 2015762 - | hypothetical protein TERM 2454 2016605 - 2016619 + g 72 -8.6 -3.84514 | ATTAAAAGTTTCGTT TCCAAG TGT CTTGGA TTTACTGCTTAAGCT TERM 2455 2016932 - 2016948 + g 70 -4.4 -4.56969 | overlap 2016933 TCGCTTCTCAATTCG TGATGC TACCT GCATCG TTTGTTTCTCGGCTT TERM 2456 2017171 - 2017137 - R 100 -8 -5.77988 | gap 1 ACACATACAAAAAAA GGGAGAG-CTACCGA TGTCAC TCGATAATCTCTCCC CGTATTTACCCAACC SSON_1922 2018138 - 2017428 - | hypothetical protein TERM 2457 2018346 - 2018308 - R 87 -9.9 -4.2679 | overlap 2018320 GAAGTTTCAGGAAAA CTTTCTTTAAAAGCTCT GTTTA AAAACTCTTAAAGAAAG CCCTAACTCATGATT TERM 2458 2018366 - 2018346 - R 79 -7.6 -4.4448 | overlap 2018320 AAACTCTTAAAGAAA GCCCTAAC TCATG ATTAGGGC AAAGCTGTAAAGGAT TERM 2459 2018527 - 2018505 - R 88 -3.4 -5.65927 | overlap 2018508 TATTGAAAGAAAAAA TAAGAGAGAA TTG CTCTCCCCCA TATATACAATTATGT TERM 2460 2018522 - 2018508 - R 78 -5.7 -4.88687 | overlap 2018505 TGAAAGAAAAAATAA GAGAG AATTG CTCTC CCCCATATATACAAT SSON_1923 2018869 - 2018654 - | hypothetical protein SSON_1924 2019417 - 2018914 - | IS1 ORF SSON_1925 2021244 - 2020687 - | hypothetical protein TERM 2461 2021837 - 2021801 - R 86 -5.2 -5.53991 | gap 1, overlap 2021803 TATCTATTAAAAAAA TAGCTTGACAGAACCGG AAAG CCGTATCTATCAAGC-A TTCACCTCTCTGACA TERM 2462 2021836 - 2021803 - R 93 -10.3 -4.40552 | overlap 2021801 TCTATTAAAAAAATA GCTTGACAGAACCGG AAAG CCGTATCTATCAAGC ATTCACCTCTCTGAC TERM 2463 2022628 - 2022644 + r 88 -8.1 -4.83615 | opp_overlap 2022615 2022628 2022627 AATCTGTACAGTAAC TTTTCAG AAT CTGAAAA TTTTTATAAAAAATG SSON_1926 2023358 - 2022807 - | putative resolvase yciI 2024157 - 2024453 + | YciI-like protein TERM 2464 2024470 - 2024500 + T 76 -9.1 -3.74347 | opp_overlap 2024473, overlap 2024476 TAGAGATTCAATATT TAAGGGCACGGTT TTTGC AACCGTGTTCTTG TTTGGCCTTTCTGAG TERM 2465 2024476 - 2024494 + T 79 -8.9 -4.1023 | opp_overlap 2024473, overlap 2024470 TTCAATATTTAAGGG CACGGTT TTTGC AACCGTG TTCTTGTTTGGCCTT SSON_1928 2025268 - 2024555 - | IS600 ORF2 SSON_1929 2025711 - 2025409 - | IS600 ORF1 kch 2026020 - 2027273 + | voltage-gated potassium channel TERM 2466 2027297 - 2027326 + F 72 -8.7 -3.79071 | gap 1, opp_overlap 2027297 2027296 2027292 2027291, overlap 2027298 GACGAAAGAGTAAAC T-TATTGGGCACCG CAA TGGTGCCCAGTATA TTTAGATATTGTAGA TERM 2467 2027298 - 2027324 + F 90 -13.8 -3.47542 | opp_overlap 2027297 2027296 2027292 2027291, overlap 2027297 ACGAAAGAGTAAACT TATTGGGCACCG CAA TGGTGCCCAGTA TATTTAGATATTGTA TERM 2468 2028177 - 2028200 + G 74 -3 -5.00616 | overlap 2028181 TCATTGCCGATTGAT GCTCGACTCC GCCG GGAGTGTGGC TTTTTTCCGCAGCCC TERM 2469 2028437 - 2028466 + G 78 -8.5 -4.2461 | opp_overlap 2028439, overlap 2028440 2028441 TGATGGCGCGTATGG AAGGCCCCATCGC CACC GCGATGGGGATTA TTTATTCCTGCGACT TERM 2470 2028440 - 2028463 + G 95 -12.4 -4.24413 | opp_overlap 2028439, overlap 2028437 2028441 TGGCGCGTATGGAAG GCCCCATCGC CACC GCGATGGGGA TTATTTATTCCTGCG TERM 2471 2028441 - 2028462 + G 100 -15.9 -3.13925 | opp_overlap 2028439, overlap 2028440 2028437 GGCGCGTATGGAAGG CCCCATCGC CACC GCGATGGGG ATTATTTATTCCTGC TERM 2472 2029063 - 2029075 + G 78 -9.1 -3.88577 | overlap 2029060 CCATTATGGCAACGT GTCGC CGA GCGAC TGTTTTACTTCTTCA cls 2027644 - 2029104 + | cardiolipin synthetase SSON_1932 2029139 - 2029468 + | dsDNA-mimic protein TERM 2473 2029492 - 2029511 + T 100 -13.6 -4.03586 | opp_overlap 2029492 TTTCGGCGTGAAAAA GGGCTGAC AACT GTCAGCCC TTATTGTGTTTAAAG TERM 2474 2029511 - 2029492 - T 100 -13.6 -4.56597 | opp_overlap 2029492 TTTCGGCGTGAAAAA GGGCTGAC AACT GTCAGCCC TTATTGTGTTTAAAG oppF 2030525 - 2029521 - | ATP-binding protein of oligopeptide ABC transport system TERM 2475 2029669 - 2029687 + g 93 -8.8 -4.95547 | GGCGACGGTAATTCC CCTTCCAG TAA CTGGATGG TTTTGTTCTTCTCCA oppD 2031535 - 2030522 - | oligopeptide transporter ATP-binding component oppC 2032455 - 2031547 - | oligopeptide transport permease protein-like protein TERM 2476 2032423 - 2032435 + g 100 -9.1 -5.1963 | TTCACTGAAATTTTC CAGCG TCT CGCTG TTTTTCTTACTTAAC oppB 2033390 - 2032470 - | oligopeptide transporter permease TERM 2477 2032549 - 2032532 - G 74 -2.7 -4.93877 | overlap 2032540 2032543 TGGCATTAAACAAAA TGGTTAA AGCA CCAACCA GGATGGTCAGGCTTA TERM 2478 2032981 - 2032963 - G 70 -4.4 -4.5442 | opp_overlap 2032963, overlap 2032964 2032965 GGCGCAACCACAAAA CTGGGGAT AAC AACCCCGG TCATTGCCAGCCCCA TERM 2479 2033473 - 2033433 - R 82 -7 -4.87786 | gap 2, opp_overlap 2033441, overlap 2033434 2033438 2033440 GTAATGCGATAAAAA TCAGACACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTAT-TGC CATTAGTGCTTCACA TERM 2480 2033472 - 2033434 - R 79 -10.5 -3.51948 | gap 2, opp_overlap 2033441, overlap 2033433 2033438 2033440 TAATGCGATAAAAAT CAGACACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTAT-TG CCATTAGTGCTTCAC TERM 2481 2033469 - 2033438 - R 81 -12.4 -3.22077 | gap 1, opp_overlap 2033441, overlap 2033434 2033433 2033440 GCGATAAAAATCAGA CACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTA TTGCCATTAGTGCTT TERM 2482 2033468 - 2033440 - R 100 -15.3 -3.16187 | opp_overlap 2033441, overlap 2033438 2033434 2033433 GATAAAAATCAGACA CCGTGGAGCAGGA CAC TCCTGCCCCACGT ATTGCCATTAGTGCT TERM 2483 2033441 - 2033467 + r 100 -16.6 -3.10464 | opp_overlap 2033440 2033438 2033434 2033433 ATAAAAATCAGACAC CGTGGAGCAGGA CAC TCCTGCCCCACG TATTGCCATTAGTGC oppA 2035107 - 2033476 - | oligopeptide transport periplasmic binding protein TERM 2484 2035285 - 2035307 + r 73 -7.8 -4.08557 | TATGTCGATTCGTAC TGTGTCTC CCCTGTC GAGACACA TTATTCTTTCGCGAC TERM 2485 2035811 - 2035828 + r 76 -8.4 -4.05788 | opp_overlap 2035811, overlap 2035825 TAATGACGAAGTAAA CGGAGC ATGGCA GCTCCG TTTCATTTGAAAGGA TERM 2486 2035828 - 2035811 - R 74 -8.4 -3.98113 | opp_overlap 2035811 2035825 TAATGACGAAGTAAA CGGAGC ATGGCA GCTCCG TTTCATTTGAAAGGA ychE 2036492 - 2035845 - | hypothetical protein TERM 2487 2039608 - 2039598 - g 77 -3.2 -5.09225 | overlap 2039601 ACTGCAGCGAAAAAA GAAG CCG CTCC GGCTAAAGCTGAGAA TERM 2488 2039611 - 2039601 - g 88 -8.2 -4.64763 | overlap 2039598 GCAGCGAAAAAAGAA GCCG CTC CGGC TAAAGCTGAGAAAAA adhE 2036970 - 2039645 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2489 2039641 - 2039628 - T 83 -4.5 -5.28826 | opp_overlap 2039628 AAAGCTGAGAAAAAA GCGAA AAAA TCCGC TTAATCAGTAGCGCT TERM 2490 2039689 - 2039718 + T 89 -9.3 -4.59109 | overlap 2039681 2039691 GCCCCTTCTGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2491 2039691 - 2039716 + T 100 -16.3 -3.90762 | overlap 2039681 2039689 CCCTTCTGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_1940 2041046 - 2039700 - | IS4 orf TERM 2492 2041036 - 2041061 + g 73 -9.1 -3.61398 | opp_overlap 2041036 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 2493 2041061 - 2041036 - G 100 -9.8 -5.61596 | opp_overlap 2041036 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC tdk 2042002 - 2041385 - | thymidine kinase hns 2042607 - 2043020 + | global DNA-binding transcriptional dual regulator H-NS TERM 2494 2043048 - 2043064 + T 100 -13.7 -5.55769 | opp_overlap 2043048 TGCACTTGCTTAAAA TCCCGCC AGC GGCGGGA TTTTTTATTGTCCGG TERM 2495 2043064 - 2043048 - T 100 -13.7 -4.08767 | opp_overlap 2043048 TGCACTTGCTTAAAA TCCCGCC AGC GGCGGGA TTTTTTATTGTCCGG TERM 2496 2043137 - 2043116 - T 100 -12.3 -5.66684 | opp_overlap 2043116 2043135 TAAGCTATAAAAAAA CGGCGTCGA TTGC TCAACGCCG TTTCGTGGATAACAC TERM 2497 2043116 - 2043137 + T 79 -10.1 -3.76224 | opp_overlap 2043116, overlap 2043135 TAAGCTATAAAAAAA CGGCGTCGA TTGC TCAACGCCG TTTCGTGGATAACAC galU 2044072 - 2043164 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 2498 2043371 - 2043381 + g 70 -4.6 -4.56597 | AATTTCATCACCAGC TCCC GGA GGGG TTTTTGCCAGCAACG hnr 2045287 - 2044274 - | response regulator of RpoS ychK 2046323 - 2045379 - | hypothetical protein ychJ 2046397 - 2046855 + | hypothetical protein purU 2046905 - 2047747 + | formyltetrahydrofolate deformylase TERM 2499 2048332 - 2048317 - T 100 -8.2 -5.60993 | opp_overlap 2048317 GTGCCCATAAAAAAA CCCCGC CGAA GCAGGG TCTATGTGAACTAAA narI 2049031 - 2048354 - | nitrate reductase 1, cytochrome b(NR), gamma subunit narJ 2049741 - 2049031 - | nitrate reductase 1, delta subunit, assembly function TERM 2500 2049604 - 2049630 + g 73 -9.5 -3.5771 | opp_overlap 2049609, overlap 2049596 2049607 CGTTAAATCGCGCAG GAAAATGCCCA GCGCA TGGGCATCTTC TTTCGACAGATTTTT TERM 2501 2049625 - 2049609 - G 76 -8 -4.25848 | opp_overlap 2049607 2049604 2049596 AATCGCGCAGGAAAA TGCCCA GCGCA TGGGCA TCTTCTTTCGACAGA narH 2051276 - 2049738 - | nitrate reductase 1, beta subunit TERM 2502 2051179 - 2051193 + g 75 -5.6 -4.60041 | TATTCCACGCCTTCA CGGCTG GTC CAGACG TTTTTACAGGTAACT narG 2055016 - 2051273 - | nitrate reductase 1, alpha subunit TERM 2503 2052366 - 2052400 + g 79 -3.5 -5.10077 | gap 1, overlap 2052343 ACGACCATAATGTGT GGCGCGGTTTTACCTG GGAT CAGGTCGCACT-CGCC TTTTTTCCAGTCTTT TERM 2504 2052615 - 2052602 - G 72 -6.7 -4.1552 | CAGCGGGTGAATAAA CGGAT GCAT ATCCG AAGTATTCATGTCGT TERM 2505 2054730 - 2054749 + g 76 -10.6 -3.32769 | opp_overlap 2054710, overlap 2054724 CAGGAGTAGCTGGCA CCGCGCGG GCAG CCGCGAGG TTCATGGTTTGGCAG TERM 2506 2055385 - 2055367 - R 100 -12.4 -5.64274 | TGACGCATAAAAAAA GCGCGACA TCA TGCCGCGC AAAGGATAATCAAAT narK 2056800 - 2055409 - | nitrite extrusion protein TERM 2507 2056614 - 2056604 - G 81 -6.8 -4.67038 | opp_overlap 2056604 GTCGTAAAATTAAAA CCGA CTT TCGG TAAGTTCACCGCAAC SSON_1954 2057113 - 2056895 - | hypothetical protein TERM 2508 2056933 - 2056951 + g 75 -5.4 -4.60487 | opp_overlap 2056948, overlap 2056935 TAGTGAGTACAGTGA TTTCATAA AAA TTATGAGA TTTTTCACGGTGCTG TERM 2509 2058172 - 2058196 + G 79 -12.1 -3.04792 | AGTACGGTATTTTGC TGGCGACCCTG CCG CAGGGGCGTCA TCTTAGCCATGATCA TERM 2510 2058354 - 2058379 + G 74 -8.3 -3.92542 | TCTATTGCCCAATCT CTCTCTTGCAT GAAG ATGCAGGTGAG TTGTTTACAGATGCA TERM 2511 2058861 - 2058884 + G 70 -6 -4.15044 | gap 1, opp_overlap 2058861 CGCCGTCGTGAATCA GGTGGC-ACCG AAG TGGTGGTCACC TTTATTCCCGAAAAA narX 2057139 - 2058935 + | nitrate/nitrite sensor protein NarX narL 2058928 - 2059578 + | transcriptional regulator NarL ychP 2060832 - 2059579 - | hypothetical protein ychN 2061158 - 2061511 + | hypothetical protein chaC 2062271 - 2061555 - | cation transport regulator chaB 2062638 - 2062408 - | cation transport regulator TERM 2512 2062497 - 2062518 + g 72 -6.5 -4.30253 | overlap 2062500 GCGCGGTTTCTTCGC GACTGGCGT CATC ACGCCGATC TTCTTTATCTTTATA chaA 2062908 - 2064008 + | calcium/sodium:proton antiporter TERM 2513 2064347 - 2064306 - f 80 -6.5 -4.78848 | gap 1, opp_overlap 2064343, overlap 2064342 2064343 GCTGGAAAGAGAAAA CCCCCG-CACGTTGAGAGGT AAA ACCTGACAACAAAACGGGGG CTAATCTTGAAACCA TERM 2514 2064384 - 2064342 - f 80 -6.3 -4.78839 | opp_overlap 2064343 2064378, overlap 2064306 2064343 2064376 AACCTGACAACAAAA CGGGGGCTAATCTTGAAAC CAGAC ACTTCAAGAATAGCCGCCT TGTTGTCATTACAAC TERM 2515 2064383 - 2064343 - f 73 -9.8 -3.46219 | opp_overlap 2064343 2064378, overlap 2064306 2064342 2064376 ACCTGACAACAAAAC GGGGGCTAATCTTGAAAC CAGAC ACTTCAAGAATAGCCGCC TTGTTGTCATTACAA TERM 2516 2064343 - 2064383 + F 74 -8.4 -3.8917 | opp_overlap 2064306 2064343 2064342 2064376, overlap 2064378 ACCTGACAACAAAAC GGGGGCTAATCTTGAA ACCAGACAC TTCAAGAATAGCCGCC TTGTTGTCATTACAA TERM 2517 2064409 - 2064376 - f 100 -22.7 -3.67558 | opp_overlap 2064343 2064378, overlap 2064343 2064342 CAGACACTTCAAGAA TAGCCGCCTTGTTGT CATT ACAACAAGGCGGCTA TATGACGCTCGCGCA TERM 2518 2064378 - 2064407 + F 100 -20.9 -2.88544 | opp_overlap 2064343 2064342 2064376, overlap 2064343 GACACTTCAAGAATA GCCGCCTTGTTGT CATT ACAACAAGGCGGC TATATGACGCTCGCG TERM 2519 2064562 - 2064527 - f 76 -7.5 -4.21768 | gap 1, overlap 2064555 GAAGTAAGGTGAAAA CGGGCGTCAGGCTGCC GTGAT GGCAATATG-CGCCCG AAACCGGCCGCAGGG TERM 2520 2064594 - 2064567 - f 76 -12 -2.72263 | opp_overlap 2064567 2064568, overlap 2064555 2064566 ATATGCGCCCGAAAC CGGCCGCAGG GGTAACAG CCTGCGGCCA TTTTTGTCTTTATCT TERM 2521 2064567 - 2064594 + F 100 -9.8 -5.26155 | opp_overlap 2064555 2064567 2064566, overlap 2064568 ATATGCGCCCGAAAC CGGCCGCAGG GGTAACAG CCTGCGGCCA TTTTTGTCTTTATCT TERM 2522 2064568 - 2064593 + F 95 -13.3 -3.73253 | opp_overlap 2064555 2064567 2064566, overlap 2064567 TATGCGCCCGAAACC GGCCGCAGG GGTAACAG CCTGCGGCC ATTTTTGTCTTTATC TERM 2523 2064880 - 2064839 - f 100 -10.1 -4.78848 | gap 1, opp_overlap 2064838, overlap 2064875 2064876 GCTGGAAAGAGAAAA CCCCCGCAC-GTTGAGAGGT AAA ACCTGACAACAGAACGGGGG CTAATCTTGAACCAT TERM 2524 2065098 - 2065063 - f 76 -7.5 -4.21768 | gap 1, overlap 2065091 GAAGTAAGGTGAAAA CGGGCGTCAGGCTGCC GTGAT GGCAATATG-CGCCCG AAACCGGCCGCAGGG TERM 2525 2065130 - 2065103 - f 76 -12 -2.72263 | opp_overlap 2065103 2065104, overlap 2065091 2065102 ATATGCGCCCGAAAC CGGCCGCAGG GGTAACAG CCTGCGGCCA TTTTTGTCTTTATCT TERM 2526 2065103 - 2065130 + F 100 -9.8 -5.26155 | opp_overlap 2065091 2065103 2065102, overlap 2065104 ATATGCGCCCGAAAC CGGCCGCAGG GGTAACAG CCTGCGGCCA TTTTTGTCTTTATCT TERM 2527 2065104 - 2065129 + F 95 -13.3 -3.73253 | opp_overlap 2065091 2065103 2065102, overlap 2065103 TATGCGCCCGAAACC GGCCGCAGG GGTAACAG CCTGCGGCC ATTTTTGTCTTTATC TERM 2528 2065416 - 2065375 - f 100 -10.1 -4.78848 | gap 1, opp_overlap 2065374 2065376, overlap 2065411 2065412 GCTGGAAAGAGAAAA CCCCCGCAC-GTTGAGAGGT TTA ACCTGACAACAGAACGGGGG CTAATCTTGAACCAG SSON_1962 2065455 - 2065589 + | hypothetical protein TERM 2529 2065633 - 2065598 - T 76 -7.5 -4.21768 | gap 1, overlap 2065626 GAAGTAAGGTGAAAA CGGGCGTCAGGCTGCC GTGAT GGCAATATG-CGCCCG AAACCGGCCGCAGGG TERM 2530 2065639 - 2065664 + T 100 -13.3 -5.4251 | opp_overlap 2065626 2065638 2065637 TATGCGCCCGAAACC GGCCGCAGG GGTAACAG CCTGCGGCC TTTTTTGTATCTGGC TERM 2531 2065715 - 2065693 - T 81 -4.8 -5.1675 | opp_overlap 2065693, overlap 2065695 GCACCCATGAAAAAA GTCTTAACGC AGA ACGCTAAGGC TTTATTTTTCAAGCA TERM 2532 2065693 - 2065715 + T 73 -4.1 -4.85782 | opp_overlap 2065693 2065695 GCACCCATGAAAAAA GTCTTAACG CAGAA CGCTAAGGC TTTATTTTTCAAGCA kdsA 2066592 - 2065738 - | 2-dehydro-3-deoxyphosphooctonate aldolase SSON_1965 2067832 - 2067440 - | putative transcriptional regulator TERM 2533 2067846 - 2067862 + r 73 -10.1 -3.31792 | ATTGATAATAGCGGC CGAGCGT TAC GCGCTCG TTATCACCATAGTCA hemK 2068662 - 2067829 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase prfA 2069744 - 2068662 - | peptide chain release factor 1 TERM 2534 2068877 - 2068889 + g 70 -6.2 -4.26189 | GACGGGTAGACGCTT CGGC CTGTT GCCG TTTTGCCATTTCTGC hemA 2071042 - 2069786 - | glutamyl-tRNA reductase TERM 2535 2071653 - 2071628 - g 73 -9.1 -3.5882 | GAGATGATTGGCAAA TTGACCGGAAT GCCA ATTCCGCTCAA CAGCTTGCGCCAATG TERM 2536 2071804 - 2071794 - g 75 -6.8 -4.371 | overlap 2071795 GTTATGACACCAAAA CGCA ACC TGCG ATGCCAGCCAATATG lolB 2071256 - 2071879 + | outer membrane lipoprotein LolB ychB 2071879 - 2072730 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2537 2072750 - 2072764 + F 75 -10 -3.62522 | GGCAAGCTGAGTTTC GGTGAC AAC GTCACC TTGTTCCAGACGTTG prsA 2072881 - 2073828 + | ribose-phosphate pyrophosphokinase TERM 2538 2073846 - 2073859 + F 100 -9.5 -5.76633 | opp_overlap 2073844 2073846 GAACCCGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2539 2073859 - 2073846 - f 73 -9.5 -3.35522 | opp_overlap 2073846, overlap 2073844 GAACCCGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA ychM 2073979 - 2075631 + | putative sulfate transporter YchM TERM 2540 2075669 - 2075640 - T 74 -11.5 -2.87963 | overlap 2075658 TTTATAAGTACGAGA TTGACCAGTCAGC GCAA ACTGACTGGTCAG CAAACTGCATTATTT ychH 2075964 - 2075686 - | hypothetical protein TERM 2541 2076156 - 2076172 + H 73 -2.2 -5.24129 | CAATTATTACGTTAT CTGCAT TTGAT ACGCAG TTTTTTGTCAAGCGG pth 2076241 - 2076825 + | peptidyl-tRNA hydrolase TERM 2542 2077403 - 2077392 - g 72 -5.8 -4.38927 | CGCGTACAGAAGAAA GCCA AAGG TGGC GATAAAGACGCGAAA TERM 2543 2077477 - 2077463 - g 70 -7.1 -4.11216 | GCCCCAGCTGGAAAA CGCAG GTATG CTGCG CGCGCTGGATTTAAG ychF 2076942 - 2078033 + | translation-associated GTPase TERM 2544 2078116 - 2078089 - T 75 -11.4 -3.10537 | opp_overlap 2078094, overlap 2078094 GAGCGCAAAAGTATA TAAAATCCACGC AATT GCGTGGATTTTT CATTTCACCGAGTCC TERM 2545 2078094 - 2078111 + T 100 -11.3 -4.98531 | opp_overlap 2078089 2078094 CAAAAGTATATAAAA TCCACGC AATT GCGTGGA TTTTTCATTTCACCG TERM 2546 2078111 - 2078094 - T 95 -11.3 -4.6709 | opp_overlap 2078094, overlap 2078089 CAAAAGTATATAAAA TCCACGC AATT GCGTGGA TTTTTCATTTCACCG SSON_1976 2078530 - 2078327 - | hypothetical protein SSON_1977 2079184 - 2079687 + | IS1 ORF SSON_1978 2080464 - 2079751 - | IS600 ORF2 SSON_1979 2080907 - 2080605 - | IS600 ORF1 TERM 2547 2081070 - 2081060 - H 72 -8.2 -3.81339 | overlap 2081061 TACGTACAATTCAAA GCGG CAT CCGC GCACAATTTGCAAAC SSON_1980 2081218 - 2081496 + | hypothetical protein fliS 2081511 - 2081921 + | flagellar protein FliS fliT 2081921 - 2082286 + | flagellar biosynthesis protein FliT amyA 2082364 - 2083851 + | cytoplasmic alpha-amylase TERM 2548 2083879 - 2083854 - T 74 -11.2 -2.79505 | gap 1, opp_overlap 2083854, overlap 2083853 2083857 AGAGGTGATTTAAAT TCATCCCCGGC GGCAA GCCGGGGA-GA TTTCATTACGGCAGT TERM 2549 2083854 - 2083879 + T 87 -11.2 -3.90291 | gap 1, opp_overlap 2083854 2083853 2083857 AGAGGTGATTTAAAT TCATCCCCGGC GGCAA GCCGGGGA-GA TTTCATTACGGCAGT TERM 2550 2083877 - 2083857 - T 83 -14 -2.66272 | opp_overlap 2083854, overlap 2083854 2083853 GGTGATTTAAATTCA TCCCCGGC GGCAA GCCGGGGA GATTTCATTACGGCA TERM 2551 2083896 - 2083911 + T 74 -8.2 -3.85698 | TTCATTACGGCAGTG GCGTCG GTAA CGGCGC TTTATCCAGCGCGGC yedD 2084298 - 2083885 - | hypothetical protein TERM 2552 2084807 - 2084791 - g 79 -10.1 -3.72051 | opp_overlap 2084792 GCCAACAATGTCAAA CTGCGCA TGC CGCGCAG CCGTATCCGCATTAT yedE 2084485 - 2085690 + | putative inner membrane protein yedF 2085687 - 2085920 + | hypothetical protein TERM 2553 2085926 - 2085954 + F 93 -11.7 -3.70773 | opp_overlap 2085922 2085921 2085910, overlap 2085927 TCAGAAGTAATCCCT CATTCCCGCTGTG GCC CACAGCGGGAACA TTGTTGCCTCTGACA TERM 2554 2085927 - 2085953 + F 93 -15.2 -2.82142 | opp_overlap 2085922 2085921 2085910, overlap 2085926 CAGAAGTAATCCCTC ATTCCCGCTGTG GCC CACAGCGGGAAC ATTGTTGCCTCTGAC TERM 2555 2086715 - 2086665 - g 84 -7.6 -4.67234 | gap 1, overlap 2086666 AGGTAATGTCAAAAA CCAGGGCGCGGAGTTAATTCAAC CTGTTT GTTGACATC-CTCCACGCCCTGA AGGACGAGGATCCCT yedK 2086027 - 2086698 + | hypothetical protein TERM 2556 2086737 - 2086754 + T 70 -9.9 -2.94888 | overlap 2086735 2086750 AGGATCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT SSON_1988 2087886 - 2086738 - | putative virulence protein TERM 2557 2087313 - 2087326 + g 73 -3.8 -4.83615 | overlap 2087301 GTCGCTGAAGTCTCG CCAG CTTCTT CTGG TTTTTCTGAAAACTG TERM 2558 2087601 - 2087632 + g 77 -5.9 -4.65895 | gap 1 CGAGCTTAACGCCCT GCGGGTAGCGGAAT ACATC ATTCTG-TCCCCGC TTTTTGAATCGGGGA TERM 2559 2087992 - 2087982 - R 76 -4.6 -5.04249 | CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT TERM 2560 2088407 - 2088426 + r 71 -7 -4.07568 | opp_overlap 2088397 2088394 AACCACGCCTTATAT CCCTGCCC TGAA GGACGGGG TTTTACGGCGCACCG TERM 2561 2088736 - 2088720 - R 71 -3.8 -4.82091 | AATTAAATAAATAAA TTATGA GTCAA TCATAA ATAACAACCTTTAAT SSON_1989 2089308 - 2088805 - | IS1 ORF SSON_1990 2089704 - 2090069 + | insertion sequence 2 OrfA protein SSON_1991 2090027 - 2090932 + | insertion element IS2 transposase InsD ybcM 2092249 - 2091452 - | putative ARAC-type regulatory protein ybcL 2092810 - 2092259 - | putative kinase inhibitor emrE 2093311 - 2092979 - | multidrug efflux protein fliE 2093959 - 2093645 - | flagellar hook-basal body protein FliE TERM 2562 2093771 - 2093785 + g 79 -4.3 -4.88067 | TAACGCCACGCCGGG TTCAC CGAGA GTGAA TTTTTCTGCCTGCGT TERM 2563 2095192 - 2095176 - g 70 -5.7 -4.38472 | overlap 2095177 GGCAAATCAAAATAA CCGCCAG CAG CAGGCGA GCACCACCAGCAATA fliF 2094175 - 2095833 + | flagellar MS-ring protein fliG 2095826 - 2096821 + | flagellar motor switch protein G fliH 2096814 - 2097500 + | flagellar assembly protein H TERM 2564 2097702 - 2097730 + G 70 -3.8 -4.72986 | overlap 2097704 ACGAAGTAGAAAGCG AAGTCGTTGGCT TTAAC GGTCAACGGCTG TTTTTAATGCCGCTG TERM 2565 2097833 - 2097816 - g 85 -11.3 -3.63895 | opp_overlap 2097829 2097831 CTGAAGGACTGCAAA GCGGCAA GCAG TTGCCGC TCGGTCCGGCGTTAT TERM 2566 2098095 - 2098119 + G 74 -8.5 -3.95584 | TGATGGCACGTTACA CCCGCGCCGAT GTC ATTGTCGTGGG TTTGATTGGTGAACG fliI 2097500 - 2098873 + | flagellum-specific ATP synthase fliJ 2098892 - 2099335 + | flagellar biosynthesis chaperone TERM 2567 2100123 - 2100104 - g 78 -7.9 -4.33417 | opp_overlap 2100117 GCCAGGGACAACAAA GTGCAGA GTTGCG TCTGCAC CCGCAGGATTTAGGT fliK 2099332 - 2100459 + | flagellar hook-length control protein fliL 2100564 - 2101028 + | flagellar basal body-associated protein FliL fliM 2101033 - 2102037 + | flagellar motor switch protein FliM fliN 2102034 - 2102447 + | flagellar motor switch protein FliN fliO 2102450 - 2102815 + | flagellar biosynthesis protein FliO TERM 2568 2103214 - 2103202 - g 70 -4.7 -4.57073 | opp_overlap 2103206 GAGGCGCTGGAAAAA GGGGC GCA GCCGC TACGTGAGTTTATGC fliP 2102815 - 2103552 + | flagellar biosynthesis protein FliP fliQ 2103562 - 2103831 + | flagellar biosynthesis protein FliQ fliR 2103840 - 2104625 + | flagellar biosynthesis protein FliR rcsA 2104910 - 2105533 + | positive regulator for ctr capsule biosynthesis TERM 2569 2105569 - 2105536 - T 85 -13.9 -3.04248 | opp_overlap 2105530 2105529, overlap 2105526 2105538 CAACATGCGCTAACA CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG AATAAGATTACTCTG TERM 2570 2105567 - 2105538 - T 73 -10.7 -3.07522 | opp_overlap 2105530 2105529, overlap 2105536 ACATGCGCTAACACA TTCTGACTGGTGG TTTC CCACCAGTCAGGC TGAATAAGATTACTC dsrB 2105765 - 2105577 - | hypothetical protein SSON_2011 2105913 - 2106155 + | hypothetical protein TERM 2571 2106194 - 2106172 - f 100 -14.9 -5.88565 | opp_overlap 2106167 TGCACAATAAAAAAA TCCCGACCC TGAGG GGGTCGGGA TGAAACTTGCTTAAG SSON_2012 2106453 - 2107268 + | mannosyl-3-phosphoglycerate phosphatase SSON_2013 2108974 - 2107265 - | hypothetical protein TERM 2572 2109087 - 2109115 + r 100 -20.4 -3.22491 | opp_overlap 2109092, overlap 2109076 TTGCAGGCATTGGCA CACCAGGCCGGA AGTGA TCCGGCCTGGTG TTAATGATACCCTTT TERM 2573 2109110 - 2109092 - R 76 -11.7 -2.62983 | opp_overlap 2109087 2109076 GGCATTGGCACACCA GGCCGGA AGTGA TCCGGCC TGGTGTTAATGATAC SSON_2014 2109312 - 2109130 - | hypothetical protein yedI 2110308 - 2109391 - | hypothetical protein vsr 2111861 - 2111391 - | DNA mismatch endonuclease dcm 2113260 - 2111842 - | DNA cytosine methylase TERM 2574 2113289 - 2113269 - R 83 -13.3 -3.15999 | CCTGCATAGATTTAA CCGGCCATC TGA GATGGCCGA CAGGTTAACATAATT yedJ 2113983 - 2113327 - | hypothetical protein SSON_2020 2114406 - 2114023 - | hypothetical protein TERM 2575 2114364 - 2114379 + g 70 -4 -4.62471 | GACTTAGTACTATTA TGTGAT AAAA GTCACA TTTTTCCACATTGGA TERM 2576 2114619 - 2114635 + H 100 -13.7 -5.66684 | GTTTATATTTTTTGG GCCGGCA TGA TGCCGGC TTTTTTTATACCTTC SSON_2022 2116005 - 2116508 + | IS1 ORF TERM 2577 2116719 - 2116739 + F 73 -10.5 -3.10612 | GGTCATCAGGAGTAT GTTGATCAG GAT CTGGTCAAC TATGTTGAAATTGGA TERM 2578 2116939 - 2116968 + F 100 -10.1 -5.4756 | opp_overlap 2116939 TAAAACTAAACACTA GCCTGAGTTCG TCCCTCAT CGAATTCAGGC TTTTTTATTGGCATT yedU 2117486 - 2118337 + | chaperone protein HchA SSON_2024 2118353 - 2118631 + | IS2 orf1 SSON_2025 2118589 - 2119494 + | insertion element IS2 transposase InsD yedV 2120880 - 2119522 - | putative 2-component sensor protein yedW 2121551 - 2120880 - | transcriptional regulatory protein YedW SSON_2028 2122002 - 2122907 + | insertion element IS2 transposase InsD yedX 2123020 - 2123433 + | hypothetical protein SSON_2030 2123542 - 2124546 + | putative sulfite oxidase subunit YedY SSON_2031 2124547 - 2125182 + | putative sulfite oxidase subunit YedZ SSON_2032 2125439 - 2126089 + | hypothetical protein TERM 2579 2126180 - 2126212 + F 83 -13 -3.14602 | gap 1, opp_overlap 2126178 2126186, overlap 2126178 TGAACGCAAGCTAGC TACAGACACGCTCAT CACT ATGA-CGTGTCTGTA TATTAATAAGCTAAC SSON_2035 2127676 - 2128512 + | hypothetical protein TERM 2580 2128778 - 2128804 + T 100 -15.9 -4.34402 | overlap 2128793 TTTTAACACCTTAAG CGCCCTCGACC TTTAT GGTTGAGGGCG TTTTGCTATGAACGC TERM 2581 2132976 - 2132949 - T 77 -11.4 -3.20573 | gap 1, overlap 2132947 TCACTTATACCAATA CCCGCTCCTCGAT AGA ATC-AGGAGCGAG ACCGGATACCGTTGA SSON_2038 2135802 - 2134963 - | IS911 ORF2 TERM 2582 2135723 - 2135743 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 2583 2136265 - 2136253 - H 80 -6.9 -4.56775 | ACTTTGCCTTAAAAA GCGGC TCT GCCAC ATTAACGTCATTAAC TERM 2584 2138299 - 2138280 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 2138262 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_2039 2137314 - 2138345 + | IS630 orf TERM 2585 2138518 - 2138497 - T 75 -10.1 -3.58533 | opp_overlap 2138497 TTATAATTTCTTAAA GAGTGCTCC ATTC GGAGCTCTC TTTTTTACATTCCCT TERM 2586 2138497 - 2138518 + T 100 -10.1 -5.16572 | opp_overlap 2138497 TTATAATTTCTTAAA GAGTGCTCC ATTC GGAGCTCTC TTTTTTACATTCCCT SSON_2040 2139062 - 2138736 - | hypothetical protein TERM 2587 2139078 - 2139088 + H 73 -4 -4.88228 | TATTGGTATATCTGT TTCA CTT TGAA TTTTTGCTATTAGAT SSON_2041 2141363 - 2141866 + | IS1 ORF cbl 2142001 - 2142951 + | transcriptional regulator Cbl TERM 2588 2142976 - 2142958 - f 100 -11.7 -4.86133 | opp_overlap 2142958, overlap 2142947 CAGATATAGCAAAAA GCCCGCT ATAAA AGCGGGC TTTTCAGAAATTTGG TERM 2589 2142958 - 2142976 + F 95 -11.7 -4.12942 | opp_overlap 2142947 2142958 CAGATATAGCAAAAA GCCCGCT ATAAA AGCGGGC TTTTCAGAAATTTGG TERM 2590 2143483 - 2143493 + G 91 -3.2 -5.56568 | GACAGCTTCAATATG GTCA TTA TGGC TTTTTTTGCTGCTAT TERM 2591 2143819 - 2143799 - g 72 -6.2 -4.43681 | CAGGGAATACGAAAA TACCGCTA TTGAT TAACGGTA GCCTGAATATTCTTA yeeO 2143072 - 2144712 + | hypothetical protein TERM 2592 2144950 - 2144936 - T 79 -4.4 -5.19916 | overlap 2144945 AAAACAGTTAAAAAA TAAAAA TTA TTTTTA CCCGGTTACCTTGTA TERM 2593 2144952 - 2144978 + T 93 -7.3 -5.75822 | opp_overlap 2144945 AAAAATTATTTTTAC CCGGTTACCTT GTAAA AAAGTGACCGG TTTTTTTGATTTCTG TERM 2594 2145333 - 2145299 - T 84 -13.9 -2.90382 | opp_overlap 2145304 2145308 2145327, overlap 2145304 2145308 AAGAATTATATGAGA TTAAAGAAATCTGCC GTAAA GACAGATTTCTTTAA AAGATAATTAGAGAT TERM 2595 2145328 - 2145304 - T 77 -9.4 -3.8766 | opp_overlap 2145304 2145308 2145327, overlap 2145299 2145308 TTATATGAGATTAAA GAAATCTGCC GTAAA GACAGATTTC TTTAAAAGATAATTA SSON_2046 2146057 - 2145341 - | hypothetical protein TERM 2596 2146332 - 2146300 - R 73 -9.9 -3.34013 | opp_overlap 2146321, overlap 2146305 2146307 TATCCGCCCAAGGAA GCAAACAGCCCACGA TTA TTGCAGGCTATTTGC CAGGTGTCTTACTTA amn 2147842 - 2146388 - | AMP nucleosidase TERM 2597 2146529 - 2146515 - G 73 -4.2 -4.82901 | GCGCCTTCATAAAAA CGGTTA GCC TGACCG GGAAGTTTAATCTCA TERM 2598 2147322 - 2147304 - G 84 -7.4 -4.65895 | overlap 2147306 CGTGCGAGGGAAAAA TCGACGCG GCG CGCATCAA AATGCGATAGCGGGG SSON_2048 2148777 - 2148274 - | IS1 ORF nac 2149935 - 2149000 - | nitrogen assimilation transcriptional regulator TERM 2599 2150343 - 2150372 + r 80 -12.3 -3.02946 | opp_overlap 2150349, overlap 2150349 AGAGGAGCCAAATTC AAAAAAGCCTGCT TTCT AGCAGGCTTTTTG CTTTCTAATTACCAA TERM 2600 2150366 - 2150349 - R 100 -11.3 -5.22039 | opp_overlap 2150349 2150343 GCCAAATTCAAAAAA GCCTGCT TTCT AGCAGGC TTTTTGCTTTCTAAT TERM 2601 2150349 - 2150366 + r 100 -11.3 -5.05505 | opp_overlap 2150349, overlap 2150343 GCCAAATTCAAAAAA GCCTGCT TTCT AGCAGGC TTTTTGCTTTCTAAT cobT 2152470 - 2151391 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2153225 - 2152482 - | cobalamin synthase cobU 2153767 - 2153222 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase SSON_2055 2154398 - 2153901 - | hypothetical protein pocR 2155496 - 2154849 - | pdu/cob regulatory protein TERM 2602 2155620 - 2155608 - R 80 -5.5 -4.9645 | opp_overlap 2155609 AGGACAATAACAAAA GCCTC CGT GAAGC GGGAGACTTTTTAAT pduF 2156508 - 2155699 - | propanediol diffusion facilitator TERM 2603 2157207 - 2157185 - g 81 -9 -4.07568 | overlap 2157196 GTCGGGGCGGTAAAA GCGGCAACAG ACG CGGGTGCCGC AGCTGCGCATAACGT pduA 2157020 - 2157304 + | putative propanediol utilization protein: polyhedral bodies pduB 2157301 - 2158113 + | putative propanediol utilization protein: polyhedral bodies TERM 2604 2159571 - 2159557 - g 77 -10 -3.57561 | opp_overlap 2159556 2159555 CTGGAAGTGGTGAAA GCCTTG GCG CAAGGC AGTTTTACCGATGTC pduC 2158132 - 2159796 + | putative propanediol utilization protein: glycerol dehydratase large subunit TERM 2605 2160332 - 2160312 - g 77 -6 -4.61231 | overlap 2160314 TCAGATTGGCAAAAA CGCCGCGC GTTAT GCGAAGCG CGAGTCTCCACAACC pduD 2159806 - 2160474 + | putative propanediol utilization protein: diol dehydratase medium subunit pduE 2160489 - 2161007 + | putative propanediol utilization protein: diol dehydratase small subunit TERM 2606 2161341 - 2161330 - g 70 -5.8 -4.21936 | overlap 2161322 GTCACAACCCGAAAA CTCC GGGC GGAG TGGGGCTGGGCGTAG TERM 2607 2161773 - 2161762 - g 72 -7.2 -4.18494 | CAGTGGTAGTGAAAA CGCC CTCT GGCG ACGTTAAAGCCCGTT TERM 2608 2162139 - 2162125 - g 74 -10 -3.53811 | CCGACCGTCTGCAAA TGGCGA TGA TCGCCA GTGAAATTAAGCAAA pduG 2161017 - 2162849 + | putative propanediol utilization protein: diol dehydratase reactivation TERM 2609 2163181 - 2163160 - g 100 -13.1 -4.07568 | GCCCGCCTGGTAAAA GGAATTCCC TTCC GGGAATTCC ACTCATAATCCACAG pduH 2162839 - 2163189 + | putative propanediol utilization protein: diol dehydratase reactivation pduJ 2163209 - 2163484 + | putative propanediol utilization protein: polyhedral bodies TERM 2610 2163899 - 2163883 - g 77 -6.5 -4.59773 | opp_overlap 2163884, overlap 2163884 TGTCAGCGGCAAAAA GGTGAGC CCC GCTCACT TTGCCTGTACGCCAA TERM 2611 2163884 - 2163898 + G 77 -10 -3.70902 | opp_overlap 2163883 2163884 GTCAGCGGCAAAAAG GTGAGC CCC GCTCAC TTTGCCTGTACGCCA TERM 2612 2163898 - 2163884 - g 72 -10 -3.35542 | opp_overlap 2163884, overlap 2163883 GTCAGCGGCAAAAAG GTGAGC CCC GCTCAC TTTGCCTGTACGCCA pduK 2163508 - 2163930 + | putative propanediol utilization protein: polyhedral bodies TERM 2613 2164514 - 2164536 + G 70 -4.9 -4.57569 | CGATGAGGCCAACGC CG-CAGGCGCT GAT AGC-CCTGACG TTTTTGCCACACTGG pduL 2163933 - 2164565 + | putative propanediol utilization protein pduM 2164562 - 2165053 + | putative propanediol utilization protein TERM 2614 2165182 - 2165198 + G 72 -10.1 -3.37344 | opp_overlap 2165181 TCTCACGCCATTAAC CGGCGAC GAA GTTGCCG TTGATTCAGTCGGCG pduN 2165057 - 2165332 + | putative propanediol utilization protein: polyhedral bodies TERM 2615 2165878 - 2165865 - g 72 -6.7 -4.25104 | CGTTGCTCATCAAAA CCTGA TGAT TCAGG AAATCACAAAACGTT pduO 2165344 - 2166351 + | putative propanediol utilization protein: B12 related TERM 2616 2167602 - 2167586 - g 72 -5 -4.59511 | opp_overlap 2167590, overlap 2167588 AATATTTGTCAAAAA CGGCCC CTCCT GGGCGG GTATTGGCGTCGGCG pduP 2166549 - 2167733 + | putative propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase pduQ 2167744 - 2168856 + | putative propanediol utilization protein: propanol dehydrogenase pduS 2168853 - 2169755 + | putative propanediol utilization protein: ferredoxin pduT 2170201 - 2170755 + | putative propanediol utilization protein: polyhedral bodies pduU 2170755 - 2171105 + | putative propanediol utilization protein: polyhedral bodies pduV 2171110 - 2171553 + | putative propanediol utilization protein TERM 2617 2171644 - 2171608 - T 86 -10.9 -3.72982 | opp_overlap 2171615, overlap 2171604 2171611 2171615 ACAGAAAAGAATCAA TGAGCAATGAGGGTTGC CGG GCAACCCTCATTGAATA AAACAGGAATTACTT TERM 2618 2171641 - 2171611 - T 100 -17 -2.93765 | opp_overlap 2171615, overlap 2171608 2171604 2171615 GAAAAGAATCAATGA GCAATGAGGGTTGC CGG GCAACCCTCATTGA ATAAAACAGGAATTA TERM 2619 2171637 - 2171615 - T 100 -16.4 -3.30956 | opp_overlap 2171615, overlap 2171611 2171608 2171604 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACAGGA TERM 2620 2171615 - 2171637 + T 100 -16.4 -3.05384 | opp_overlap 2171615 2171611 2171608 2171604 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACAGGA yeeX 2172049 - 2171654 - | hypothetical protein TERM 2621 2171962 - 2171945 - G 70 -5.6 -4.329 | GAACAGACGAACAAA TTCCAG TACGTC CTGGAA TGAAGGCTTGGTAGT yeeA 2173213 - 2172155 - | hypothetical protein sbmC 2173884 - 2173411 - | DNA gyrase inhibitor dacD 2175175 - 2174003 - | D-alanyl-D-alanine carboxypeptidase TERM 2622 2174293 - 2174327 + g 100 -10.8 -4.63218 | overlap 2174294 GTTCCGTTCCGACCT TTTTCCCACGGTGCAA AAT TTGCACCGTAGTAAAG TTTTGTTGCCCCCAA TERM 2623 2174294 - 2174326 + g 83 -12.1 -3.3761 | overlap 2174293 TTCCGTTCCGACCTT TTTCCCACGGTGCAA AAT TTGCACCGTAGTAAA GTTTTGTTGCCCCCA TERM 2624 2175104 - 2175093 - G 72 -4.4 -4.62069 | overlap 2175098 GGCTGAGGTGAAAAA GGAA TGTT TTCC GCCGCAAAACCAGAC sbcB 2175378 - 2176805 + | exonuclease I yeeD 2177075 - 2176848 - | hypothetical protein yeeE 2178147 - 2177089 - | putative transport system permease protein TERM 2625 2178305 - 2178278 - R 100 -12.8 -6.32976 | opp_overlap 2178278 2178274 AAAAAAATAAAAAAA CCGGAGCCAAAT ATTC ATTCGACTCCGG TTGATTATTAGAAAA yeeF 2179690 - 2178326 - | putative amino acid/amine transport protein TERM 2626 2179865 - 2179839 - R 87 -7.3 -5.26875 | opp_overlap 2179842, overlap 2179842 GTTTGAAGCAAAAAA TAACCGACGCT GATGA AACGTCGGTTT TTAGTCATTTTTTGA TERM 2627 2179842 - 2179862 + r 82 -6.8 -4.88129 | opp_overlap 2179842 2179839 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT TERM 2628 2179862 - 2179842 - R 89 -9 -4.72473 | opp_overlap 2179842, overlap 2179839 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT yeeY 2180901 - 2179951 - | putative transcriptional regulator LYSR-type SSON_2086 2181750 - 2180926 - | putative enzyme of sugar metabolism SSON_2087 2182087 - 2181833 - | hypothetical protein yefM 2182335 - 2182084 - | antitoxin YefM hisL 2182618 - 2182668 + | his operon leader peptide TERM 2629 2182733 - 2182759 + F 100 -19.5 -5.4505 | opp_overlap 2182733 TGAACGCATGAGAAA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG TERM 2630 2182759 - 2182733 - f 100 -20.2 -3.99405 | opp_overlap 2182733 TGAACGCATGAGAAA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG TERM 2631 2183117 - 2183129 + G 81 -10.5 -3.64703 | CGTCGTCTGGATTTC GGCGG CTG CCGCC TTTCGCTGGCAACGC hisG 2182814 - 2183713 + | ATP phosphoribosyltransferase hisD 2183719 - 2185023 + | histidinol dehydrogenase TERM 2632 2185879 - 2185893 + G 70 -7.1 -4.13767 | CACTGAAAGAGATCC CCTGC GTAGA GCAGG TTTTCGACTCCGCAA hisC 2185020 - 2186090 + | histidinol-phosphate aminotransferase TERM 2633 2186715 - 2186727 + G 73 -9.1 -3.7108 | opp_overlap 2186712 TGCTGGATCAGATCG CCACC CAC GGTGG TTTCCGTATGGAAAT TERM 2634 2186841 - 2186854 + G 70 -5.9 -4.28487 | opp_overlap 2186841, overlap 2186836 CTCTTGGCGACAAAC GCGGT ATTT GCCGC TTTGGTTTTGTGCTA hisB 2186090 - 2187157 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase TERM 2635 2187252 - 2187241 - g 70 -4.4 -4.45544 | opp_overlap 2187246 GGTTATGAACCAAAA GTCA GCCG TGAC CCGGACGTGGTGTTG hisH 2187157 - 2187747 + | imidazole glycerol phosphate synthase subunit HisH hisA 2187747 - 2188484 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 2188466 - 2189242 + | imidazole glycerol phosphate synthase subunit HisF hisI 2189236 - 2189847 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 2636 2189892 - 2189927 + T 72 -9 -3.57144 | opp_overlap 2189898, overlap 2189897 2189898 GTCGCATCCGGCAAA AAAAAAGGGCAAGGTG TCAC CACCCTGCCCGTTTTC TTTAAAGCTGCAAAG TERM 2637 2189897 - 2189922 + T 93 -8.9 -4.87803 | opp_overlap 2189898, overlap 2189892 2189898 ATCCGGCAAAAAAAA AGGGCAAGGTG TCAC CACCCTGCCCG TTTTCTTTAAAGCTG TERM 2638 2189898 - 2189921 + T 88 -12.4 -3.51958 | opp_overlap 2189898, overlap 2189897 2189892 TCCGGCAAAAAAAAA GGGCAAGGTG TCAC CACCCTGCCC GTTTTCTTTAAAGCT TERM 2639 2189921 - 2189898 - T 100 -14.6 -6.06723 | opp_overlap 2189898 2189897 2189892 TCCGGCAAAAAAAAA GGGCAAGGTG TCAC CACCCTGCCC GTTTTCTTTAAAGCT wzzB 2190957 - 2189944 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 2640 2191056 - 2191036 - R 76 -8.3 -4.0865 | GGTAACAAAAGACAA TCAGGGC GTAAATA GCCCTGA TAACAAGATGTTAGT ugd 2192233 - 2191067 - | UDP-glucose 6-dehydrogenase TERM 2641 2191885 - 2191869 - G 77 -8.7 -4.07687 | opp_overlap 2191869 2191870, overlap 2191870 ATCGCTTCGGTAAAA CCAACGG GAA CCGTTGA TTTGATGACCATAAC TERM 2642 2192455 - 2192433 - R 100 -11.2 -6.10489 | opp_overlap 2192432 AATGGCAAAAAAAAA GCCCGGTGCA ATA TACGCCGGGC CTCAATTTTACTGTT gnd 2193889 - 2192483 - | 6-phosphogluconate dehydrogenase cpsG 2195423 - 2194053 - | phosphomannomutase TERM 2643 2195449 - 2195471 + r 81 -3.4 -5.3658 | overlap 2195456 TTTTTCAGGCAATAG TTGGCCCT GACCGAA ACGGCCAA TTTTGTTTTTGTCGT cpsB 2196964 - 2195528 - | mannose-1-phosphate guanyltransferase wcaI 2198190 - 2196967 - | glycosyl transferase TERM 2644 2197334 - 2197358 + g 76 -3.5 -5.00616 | overlap 2197336 GGGAAAAATTGCATG TTGCGCAGT CCACGCT GCTGCGCCA TTTTTTCCAGCCGCG TERM 2645 2197861 - 2197843 - G 70 -6.6 -4.07568 | TCCCGGCGTGCAAAA CAGCGTTG GCA CCACGCCG ATAATGCGATCCGGC wcaH 2198669 - 2198187 - | GDP-mannose mannosyl hydrolase wcaG 2199634 - 2198669 - | putative nucleotide di-P-sugar epimerase or dehydratase gmd 2200758 - 2199637 - | GDP-D-mannose dehydratase wcaF 2201332 - 2200784 - | putative colanic acid biosynthesis acetyltransferase WcaF wcaE 2202094 - 2201348 - | glycosyl transferase wcaD 2203322 - 2202105 - | putative colanic acid biosynthesis protein TERM 2646 2203237 - 2203252 + gr 70 -6.1 -4.19238 | GTGATGGGGAAACTT TCGCC AAGCTG GGCGA TTTTGACGTTAACCA wcaC 2204514 - 2203297 - | glycosyl transferase wcaB 2204999 - 2204511 - | putative colanic acid biosynthesis acetyltransferase WcaB wcaA 2205841 - 2205002 - | glycosyl transferase SSON_2113 2208096 - 2205934 - | tyrosine kinase TERM 2647 2207726 - 2207749 + g 71 -3 -4.7497 | gap 1, overlap 2207728 ATCAGTCGCTCCCAG CCCG-CCCCGA AAA TCGGGAACGTG TTTTTGCTCACTGCA wzb 2208542 - 2208099 - | tyrosine phosphatase TERM 2648 2208260 - 2208291 + g 70 -5.8 -4.21194 | TGCCGCGCATCTCAG GTGCCATCTCGCAT AAGC GTTCGATATGGCGC TTTTCCATGGTCAAA wza 2209687 - 2208548 - | putative polysaccharide export protein TERM 2649 2211120 - 2211076 - g 75 -11.3 -2.90075 | opp_overlap 2211085, overlap 2211074 TTTCCGCTAACCAGA CGCTGCGCCAGCGGACTACCG AAG CGGTAATGCGCCTGCTTAGCG GGCAAAAAGAAGATG TERM 2650 2211762 - 2211750 - g 70 -4.1 -4.72272 | overlap 2211751 CCGCTGGATGAAAAA CGTGA ATA TCACA CCATTGCCGGGCTGT yegH 2210280 - 2211929 + | putative transport protein asmA 2214056 - 2212191 - | putative assembly protein TERM 2651 2212835 - 2212854 + g 74 -8.6 -3.8709 | overlap 2212836 2212842 TACCAATCTCAACGT TTTCCAGC CGTG GCTGGAAG TTTATCCGCGGATTT TERM 2652 2213190 - 2213219 + g 70 -7.1 -4.128 | GTCAAGATTCAGTTG CGGGAATTGCAGT CTCA GCTGCCATTCCGG TTTCTCTGTCAGCGT dcd 2214659 - 2214078 - | deoxycytidine triphosphate deaminase udk 2215392 - 2214751 - | uridine kinase TERM 2653 2214792 - 2214802 + g 70 -4.6 -4.56597 | opp_overlap 2214788 2214786 CTTTCAATATATCGA TCGC GAT GCGG TTTTTCCCGCCGCGC TERM 2654 2216149 - 2216174 + G 75 -4.6 -4.81551 | overlap 2216150 TGGTTGTCCTGCTGA CGCCCGGAGA CGATCC TCTCAGGGCA TTTTTGATATGGGTA TERM 2655 2216266 - 2216280 + G 95 -10 -4.67353 | ATCTGCTGCGCCATC GCAACC CAC GGTTGC TTTTTGAGTCGCTGC TERM 2656 2216630 - 2216595 - g 88 -12 -3.75153 | gap 1, overlap 2216599 2216600 2216614 2216615 CGTGCGGAACGCAAA CACATTTCCGAAAGCGA AAC CCGCTTTCGGAA-CGCG ATGGAATATTCCGCT TERM 2657 2216627 - 2216599 - g 83 -12.5 -3.30106 | overlap 2216595 2216600 2216614 2216615 CGGAACGCAAACACA TTTCCGAAAGCGA AAC CCGCTTTCGGAAC GCGATGGAATATTCC TERM 2658 2216626 - 2216600 - g 100 -16 -2.57581 | overlap 2216599 2216595 2216614 2216615 GGAACGCAAACACAT TTCCGAAAGCGA AAC CCGCTTTCGGAA CGCGATGGAATATTC TERM 2659 2216865 - 2216844 - g 71 -2.9 -4.75174 | overlap 2216855 TATTCAATGGAAAAA CGCTACTAC AACC GCAATGGCG ATGTTGTCTGGGCGT yegE 2215710 - 2219027 + | putative sensor protein alkA 2219985 - 2219137 - | 3-methyl-adenine DNA glycosylase II TERM 2660 2220223 - 2220205 - g 70 -5.2 -4.43272 | opp_overlap 2220206, overlap 2220206 ACTGAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG TERM 2661 2220960 - 2220947 - g 73 -3.8 -4.81249 | GGCGAAACCGAAAAA GGCA TCGCCC TGCC GATCCTGCCGTGGTG yegD 2220119 - 2221471 + | putative chaperone TERM 2662 2221479 - 2221519 + T 72 -3.2 -4.9218 | gap 1, opp_overlap 2221480, overlap 2221480 TTCGTTAATTGAAAA ATGGCTCAGCAGC-GGC TTAAATCT GCCTGCGCCTGAGCCAG TTTTTCTGCTGCCTG TERM 2663 2221518 - 2221480 - T 80 -6.7 -4.74103 | gap 1, opp_overlap 2221480 2221479 TCGTTAATTGAAAAA TGGCTCAGCAGC-GGC TTAAATCT GCCTGCGCCTGAGCCA GTTTTTCTGCTGCCT SSON_2123 2223424 - 2221484 - | putative chaperonin SSON_2124 2224182 - 2223421 - | hypothetical protein TERM 2664 2223687 - 2223671 - G 71 -9.5 -3.53444 | CCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC GGCATCTTCGTCGGT TERM 2665 2224194 - 2224167 - G 74 -8.4 -3.92373 | overlap 2224170 CAGCGGATGCATAAA CCAGACGCCAGC TCAC ACTGACGTCCAG CCTTTTGGCGCTTCC SSON_2125 2224838 - 2224179 - | hypothetical protein TERM 2666 2224650 - 2224660 + g 72 -5.4 -4.56597 | GAACGTCACAATGCC GAGT TCC ACTC TTTTTAAAGCCAGCG TERM 2667 2225139 - 2225158 + H 79 -10 -3.71649 | opp_overlap 2225138 2225139, overlap 2225149 TTTCCTTATTAAAAG CCCTCTTC TCCG GGAGAGGG TTTCCCGTTTCAGCG TERM 2668 2225466 - 2225485 + H 86 -11.4 -3.71649 | opp_overlap 2225465, overlap 2225476 CCTTTCCTTATTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 2669 2225794 - 2225813 + H 86 -11.4 -3.71649 | overlap 2225804 2225806 2225812 CTTTCCTTATTTATG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 2670 2226719 - 2226697 - g 71 -10.6 -2.93853 | opp_overlap 2226697 2226698, overlap 2226696 TGTTGGTAACCAAAT CTCCAGTGGT GAT ACCACCGGAA TTGTGGTGATCACCC SSON_2126 2226053 - 2227294 + | multidrug efflux system subunit MdtA TERM 2671 2227291 - 2227280 - f 80 -5.8 -5.09173 | opp_overlap 2227290 GAATACGCGAAAAAA GGAG CACG CTCC TGATGCAGGTGTTAC TERM 2672 2227319 - 2227338 + G 72 -6.4 -4.33819 | opp_overlap 2227321 TACCCCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 2673 2228600 - 2228578 - g 73 -4.1 -4.7657 | gap 1 GAAAAAGGCGAAAAA CCGTTG-GCG GCGG CGCTCAAGGG CGCAGGTGAAATCGG yegN 2227294 - 2230416 + | multidrug efflux system subunit MdtB TERM 2674 2230906 - 2230928 + G 74 -10.6 -3.18849 | overlap 2230891 2230904 TCGACGCAGCTGGCT CCGACGATTT CGC AAATCGACGG TGTTGGTGATGTCGA TERM 2675 2233192 - 2233176 - g 82 -3 -5.28942 | gap 1, opp_overlap 2233176 2233178, overlap 2233178 CATCGTAAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTCGAAG yegO 2230417 - 2233494 + | multidrug efflux system subunit MdtC yegB 2233495 - 2234910 + | multidrug efflux system protein MdtE TERM 2676 2235196 - 2235186 - g 78 -8.2 -4.20025 | opp_overlap 2235192, overlap 2235187 AATTCGGAAGATAAA CCCG GCC CGGG TATGCCACCGCACGG TERM 2677 2235192 - 2235224 + G 76 -10.6 -3.39862 | gap 1, opp_overlap 2235186 2235187, overlap 2235201 GAAGATAAACCCGGC CCGGGTATGCCA-CC GCAC GGCTGGCGTACCCAG TTCTGGGTGGTTGAT baeS 2234907 - 2236310 + | signal transduction histidine-protein kinase BaeS TERM 2678 2236741 - 2236752 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCATG TERM 2679 2236939 - 2236927 - g 78 -5.5 -4.81551 | overlap 2236928 CAGCCACATTAAAAA CCTGC GCC GCAAG CTGGAATCTCTCGAC baeR 2236307 - 2237029 + | DNA-binding transcriptional regulator BaeR SSON_2132 2237365 - 2237868 + | IS1 ORF yegP 2237958 - 2238329 + | hypothetical protein TERM 2680 2239222 - 2239208 - g 73 -9.2 -3.69395 | overlap 2239205 TTTATGATCGAAGAA GCCCAG CGT CCGGGC GAGTATATGACCGCG yegQ 2238476 - 2239837 + | hypothetical protein TERM 2681 2239971 - 2240002 + T 100 -8.1 -5.28176 | overlap 2239974 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTATGCATAAG TERM 2682 2239974 - 2239999 + T 93 -9.8 -4.73105 | overlap 2239971 GGAACCACCTCCTTA GCCTGTGTAA TCTCCC TTACACGGGC TTATTTTTTATGCAT SSON_2135 2240544 - 2240167 - | hypothetical protein TERM 2683 2241372 - 2241358 - g 71 -2.7 -4.77757 | opp_overlap 2241362 CCGGAAAAATTAAAA GCCGC GCTGG GTGGC GTCTCTTACATCATT SSON_2136 2240890 - 2241789 + | lipid kinase TERM 2684 2241858 - 2241827 - T 72 -8.7 -3.69621 | opp_overlap 2241837, overlap 2241820 AGGGAGAATCCGAAA TGCCGGATGCGGT GTAAAT ACCTTATCCGGCA TACAGAACAATACTA gatR 2242650 - 2241871 - | galactitol utilization operon repressor TERM 2685 2242493 - 2242506 + g 74 -2.3 -5.06414 | opp_overlap 2242492, overlap 2242494 GCACCGCCATGAAAG CGCGT AACC ACGCC TTTTTGTTCGAGAAA TERM 2686 2242720 - 2242747 + r 76 -9.1 -3.74693 | gap 1, opp_overlap 2242719 2242721 2242722, overlap 2242721 TCTGTTTTGCACAAT AC-CGGGCCAGC ATCAC GCTGGCCCGCGG TTTCATGGAATGAGC TERM 2687 2242745 - 2242721 - R 83 -13.5 -3.21276 | opp_overlap 2242721 2242720, overlap 2242719 2242722 CTGTTTTGCACAATA CCGGGCCAGCA TCA CGCTGGCCCGC GGTTTCATGGAATGA TERM 2688 2242721 - 2242746 + r 79 -12.6 -2.84602 | gap 1, opp_overlap 2242719 2242721 2242722, overlap 2242720 CTGTTTTGCACAATA C-CGGGCCAGC ATCAC GCTGGCCCGCG GTTTCATGGAATGAG TERM 2689 2242744 - 2242722 - R 95 -17 -2.52623 | opp_overlap 2242721 2242720, overlap 2242721 2242719 TGTTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCATGGAATG gatD 2243790 - 2242750 - | galactitol-1-phosphate dehydrogenase gatC 2245193 - 2243838 - | PTS system galactitol-specific enzyme IIC gatB 2245481 - 2245197 - | galactitol-specific PTS system component IIB SSON_2141 2246356 - 2245853 - | IS1 ORF gatY 2248890 - 2248036 - | tagatose-bisphosphate aldolase TERM 2690 2248341 - 2248322 - G 71 -3.4 -4.85599 | overlap 2248326 2248327 TCCAGTCGAGAAAAA TCAAGCGC CGGT GCGCTGGC ATACATCCCATGAGC TERM 2691 2249034 - 2249013 - R 100 -13.7 -5.58209 | TGAAAGGCAAAAAAA CGGCCTCCC GATA GGGAAGCCG TAGCAAAGTGCGCGT SSON_2145 2250261 - 2249209 - | fructose-bisphosphate aldolase TERM 2692 2250362 - 2250374 + H 76 -4.1 -5.08011 | overlap 2250360 ACGGGCGAGTTTTTC CATCT TTT GGATG TTTTTTCAGCGTTTT TERM 2693 2250541 - 2250525 - g 85 -8.7 -4.56729 | opp_overlap 2250525 2250528 ATTAAAAGATGAAAA CAACAGC AAA GCTGTCG TTCATGATGTTTGTT TERM 2694 2251264 - 2251246 - g 72 -4.5 -4.7254 | opp_overlap 2251255, overlap 2251232 AGTTGGCATGAAAAA CGCCACC GGCTG GATGACG CTCGGCCAGTTCTCT TERM 2695 2251296 - 2251306 + G 72 -4.6 -4.65895 | overlap 2251305 AAATCTTCTTTATGC TGGC ATT GCCG TTTTTCACTAAACGC TERM 2696 2251535 - 2251502 - g 87 -4.5 -5.252 | overlap 2251504 TATGTCGATAAAAAA GCCCCCGTGCA TATGCGTACCGC TGCGCAGGGGC TGATCACGCTCTGCT TERM 2697 2251669 - 2251702 + G 86 -12.5 -3.4727 | CGGGATGTGGACTTT CGGCGCGGTGATGAT TGCC ATTATCGCCGTGCTG TTCATGATTTTTTTC yegT 2250518 - 2251795 + | putative nucleoside permease protein TERM 2698 2252109 - 2252097 - g 77 -3.3 -5.06414 | overlap 2252101 CGCCTTTAACAAAAA CGTAC TAG GTCCG ACCTCGAAGATTGCG SSON_2147 2251792 - 2252796 + | hypothetical protein TERM 2699 2252860 - 2252890 + G 80 -11.9 -3.33162 | gap 1, overlap 2252854 CGGTGATGGTCGTCG GCG-CGGCGGTCAT TGAC GTGATCGCCGACGC TTATGCCCTCCCCTG SSON_2148 2252793 - 2253758 + | putative kinase yegW 2254478 - 2253732 - | putative transcriptional regulator TERM 2700 2253793 - 2253841 + g 93 -11 -4.39568 | opp_overlap 2253793, overlap 2253795 ATGCTGTACTCAATA GGCCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGGTA TTTTGCTATCTAACT TERM 2701 2253795 - 2253839 + g 100 -15.8 -3.79993 | opp_overlap 2253793, overlap 2253793 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA TERM 2702 2254346 - 2254377 + g 83 -5.1 -5.12707 | gap 1, opp_overlap 2254346 2254345 CACCGGGCAAAATAT TGCCATGCTCCAGC ACCCC GCTGC-GCACGGCA TTTTTTACCGTTTCG TERM 2703 2254427 - 2254409 - G 78 -8.8 -4.25401 | CAAACTTAATATAAA GCGGCG TGTTATC CGCCGC TAAAATACGTTCGTT yegX 2255357 - 2254530 - | hypothetical protein thiD 2256213 - 2255413 - | phosphomethylpyrimidine kinase TERM 2704 2255583 - 2255593 + g 71 -3.2 -4.78107 | AGAGTGTACAACCAG TACC GTG GGTG TTTTTGGTCATAATG thiM 2256998 - 2256210 - | hydroxyethylthiazole kinase yohL 2257493 - 2257221 - | hypothetical protein TERM 2705 2257752 - 2257720 - g 70 -4 -4.66609 | overlap 2257723 CAGGGCACTCAAAAA CGATGATGGCGGCG TTTAT CATCGCCATCAAAG GCACCATTAAACAAG yohM 2257614 - 2258438 + | nickel/cobalt efflux protein RcnA TERM 2706 2258521 - 2258539 + G 74 -7.4 -4.08919 | CTCTCTGCTCGCTAA GGATGCTT TTA GGGCATCC TTTCATTTACACTTT SSON_2155 2258477 - 2258995 + | hypothetical protein TERM 2707 2259021 - 2259001 - T 100 -11.1 -5.42259 | overlap 2259002 TCATCGCTAAAAAAA GCCCCCTCA TCA TGAGGGGGA AATGCAGACACCTTG TERM 2708 2259020 - 2259002 - T 100 -14.6 -3.84633 | overlap 2259001 CATCGCTAAAAAAAG CCCCCTCA TCA TGAGGGGG AAATGCAGACACCTT yehA 2260111 - 2259077 - | putative type-1 fimbrial protein TERM 2709 2259824 - 2259836 + g 79 -4.1 -5.14163 | GGTCTGATTATTTGA CAACG TGA TGTTG TTTTTATTGGTCCAT SSON_2157 2262715 - 2262212 - | IS1 ORF yehC 2264119 - 2263400 - | putative chaperone TERM 2710 2264117 - 2264097 - G 100 -13.3 -4.54727 | opp_overlap 2264097 2264096 2264094, overlap 2264067 CCTCTTAAATTAAAA GGCCGCCAT GGG ATAGCGGCC ATGTTTATTACCTGG TERM 2711 2264097 - 2264117 + g 70 -11.1 -2.81702 | opp_overlap 2264067 2264097, overlap 2264096 2264094 CCTCTTAAATTAAAA GGCCGCCAT GGG ATAGCGGCC ATGTTTATTACCTGG yehD 2264696 - 2264154 - | putative fimbrial-like protein TERM 2712 2264782 - 2264797 + r 85 -6.2 -5.18866 | TCAAAAAAGTTACCG CAATGT AAAC ACATTG TTTTATTTATTTGAA yehE 2265220 - 2264939 - | hypothetical protein TERM 2713 2265439 - 2265399 - R 80 -6.9 -4.59853 | opp_overlap 2265407, overlap 2265378 2265403 TTAATGCGGCAAAAA CTAATACACCGCATCAATG TAA CATCTCTGCGGTGTATGAA GAATAACCAGAATGG TERM 2714 2265435 - 2265403 - R 79 -9.9 -3.80855 | opp_overlap 2265407, overlap 2265378 2265399 TGCGGCAAAAACTAA TACACCGCATCAATG TAA CATCTCTGCGGTGTA TGAAGAATAACCAGA mrp 2266574 - 2265465 - | putative ATPase TERM 2715 2267073 - 2267056 - g 72 -8.5 -3.81488 | TCGCCTGAAAGAGAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 2716 2267118 - 2267105 - g 70 -3.8 -4.60487 | opp_overlap 2267110 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTGAA TERM 2717 2267747 - 2267735 - g 76 -9.1 -3.73775 | opp_overlap 2267731 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG metG 2266706 - 2268739 + | methionyl-tRNA synthetase TERM 2718 2268751 - 2268770 + TF 100 -10.7 -5.01553 | ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT SSON_2165 2270139 - 2269636 - | IS1 ORF molR_1 2268880 - 2269701 + | molybdate metabolism regulator, first fragment TERM 2719 2272482 - 2272501 + G 70 -4.2 -4.63218 | opp_overlap 2272468 2272465 2272464, overlap 2272483 ACACCGCAGGCCCTG ACGGCGTT AAGC AATGCCGG TTTTGTTAAGCGCAG TERM 2720 2272872 - 2272894 + G 77 -3.3 -5.06414 | GAAATTCCCTCTGCC CGCTTACCG ATGAG CGATATGCG TTTTTATTCCCGCAG TERM 2721 2273207 - 2273193 - g 77 -11.4 -3.14211 | AGCCGCGCGCAGCAA GCAGCG GAA CGCTGC AGCTGGCGATGGGTG TERM 2722 2274120 - 2274103 - g 93 -8.3 -4.93296 | TGATGATGACAAAAA CCCGCGC CTGG GCGCTGG ACGCAGAAACTGCGC yehQ 2272434 - 2274434 + | hypothetical protein TERM 2723 2274510 - 2274526 + F 79 -10.9 -3.46081 | opp_overlap 2274506 TATCCTATATAGCCC CTGGTGA GAG TCACCAG TTCCTTGATTAAATA TERM 2724 2274675 - 2274649 - g 76 -8 -4.29073 | GAAGAATCGAAGAAA TTCAGCGCCAAT CTG AACGGCACTGAA ATTGCCATTACCTAT yehR 2274544 - 2275017 + | hypothetical protein yehS 2275528 - 2275058 - | hypothetical protein yehT 2276309 - 2275575 - | putative two-component response-regulatory protein YehT yehU 2277976 - 2276291 - | putative 2-component sensor protein TERM 2725 2276939 - 2276957 + g 70 -5.8 -4.18488 | overlap 2276955 AAGCAGTTGCGCAAT CCCCTCGC CCA GCGTGCGG TTTATTGAACTGAAT TERM 2726 2278300 - 2278284 - H 72 -5.1 -4.62302 | overlap 2278286 CAACATTTTTAAAAA TCGACGA AGA TCGTCCA GGAGCGCCGTTTTTC SSON_2173 2278491 - 2278739 + | putative DNA damage-inducible protein SSON_2174 2279253 - 2278750 - | IS1 ORF TERM 2727 2279584 - 2279616 + r 100 -8.4 -5.63236 | gap 1, opp_overlap 2279530 2279584 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT SSON_2175 2280259 - 2279897 - | hypothetical protein TERM 2728 2280079 - 2280099 + g 100 -5.3 -5.47159 | overlap 2280059 2280056 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG SSON_2176 2281023 - 2280259 - | putative transposase SSON_2177 2281419 - 2281150 - | hypothetical protein SSON_2178 2281713 - 2282144 + | hypothetical protein TERM 2729 2282152 - 2282184 + F 89 -11.4 -4.08919 | gap 1, opp_overlap 2282152 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT TERM 2730 2282184 - 2282152 - f 86 -13.6 -3.16564 | gap 1, opp_overlap 2282152 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT ipaH_4 2282460 - 2284103 + | invasion plasmid antigen TERM 2731 2284168 - 2284145 - T 93 -10.2 -4.58395 | opp_overlap 2284157 2284158, overlap 2284147 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 2732 2284166 - 2284147 - T 100 -15 -3.90762 | opp_overlap 2284157 2284158, overlap 2284145 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT SSON_2180 2284906 - 2284283 - | hypothetical protein SSON_2181 2285620 - 2285922 + | IS600 ORF1 TERM 2733 2287097 - 2287108 + G 72 -4.4 -4.65747 | TCCCCTCACCCGTGA CGAA TTTA TTCG TTTTATTGAGGCTTG TERM 2734 2287419 - 2287432 + G 95 -6.7 -5.3104 | TATGGGAGAAGTACT GTGCA TAAA TGCAC TTTTGTTTTTAGTCC SSON_2182 2286063 - 2287766 + | putative integrase yehV 2287841 - 2288488 + | putative transcriptional regulator SSON_2184 2288548 - 2288655 + | hypothetical protein yehW 2289367 - 2288636 - | putative transport system permease protein TERM 2735 2289059 - 2289035 - G 72 -8.5 -3.83026 | TGGTTGCAGACCAAA GCCGATCACCG GAA CGGCAATCGCC AGCACTGCGACAGGC yehX 2290298 - 2289372 - | putative ATP-binding component of a transport system yehY 2291448 - 2290291 - | putative transport system permease protein TERM 2736 2290839 - 2290815 - G 90 -4.9 -5.39721 | TGAGCAGAGAAAAAA TTGCCCCCTGC CGA GCAGTGGAAAA GTAGCACCAGATGCC TERM 2737 2291275 - 2291261 - G 75 -5.6 -4.64676 | overlap 2291237 2291263 TTAGCGGGAATAAAA CAGGCT GTC AGCCAG GCGCAACCAACGCCC TERM 2738 2291387 - 2291377 - G 74 -8.2 -3.97368 | overlap 2291378 CGCGTAACTGATAAA CGGC AGC GCCG CTGCGATTGCCGTCA yehZ 2292372 - 2291455 - | putative transport system permease protein TERM 2739 2291532 - 2291549 + g 70 -3.5 -4.65895 | gap 1, overlap 2291528 CCACTGCAATGCTGG CATT-CAG TTG CTGCAATG TTTTTGCATCGAGGC TERM 2740 2292594 - 2292612 + r 74 -10.2 -3.15579 | opp_overlap 2292594 TGAACATCAGGCAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC TERM 2741 2292612 - 2292594 - R 93 -12.4 -3.71607 | opp_overlap 2292594 TGAACATCAGGCAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC bglX 2294921 - 2292624 - | beta-D-glucoside glucohydrolase, periplasmic TERM 2742 2292772 - 2292790 + g 75 -6.6 -4.37658 | CTGACAGTCTGAGTT TCGCCCGG TTT CAGGGTGA TTTTCTCAAAGCCTT TERM 2743 2295850 - 2295863 + G 70 -6.7 -4.01703 | opp_overlap 2295849 CCGCACGTTATAACG CCGAT CCTG ATCGG TTATTTGAATCTTCT dld 2295117 - 2296832 + | D-lactate dehydrogenase TERM 2744 2296865 - 2296836 - T 88 -8.7 -4.74801 | gap 1, opp_overlap 2296836 2296839, overlap 2296839 GAAGTGGAGTAAAAA TTACGGATGGC-AT AGT ATCGCCATCCGTCA TTCACTTAATCGTTC TERM 2745 2296862 - 2296839 - T 74 -10.4 -3.28472 | gap 1, opp_overlap 2296836 2296839, overlap 2296836 GTGGAGTAAAAATTA CGGATGGC-AT AGT ATCGCCATCCG TCATTCACTTAATCG TERM 2746 2296839 - 2296862 + T 72 -10.4 -2.79684 | gap 1, opp_overlap 2296839 2296836, overlap 2296836 GTGGAGTAAAAATTA CGGATGGC-AT AGT ATCGCCATCCG TCATTCACTTAATCG pbpG 2297812 - 2296871 - | D-alanyl-D-alanine endopeptidase TERM 2747 2296899 - 2296915 + g 100 -10.8 -5.8096 | overlap 2296883 GCCGTCTGCCCCGCC GCCGCC ATTTG GGCGGC TTTTTGTTTTTTATA TERM 2748 2297416 - 2297426 + g 81 -8.2 -4.3739 | opp_overlap 2297401 GGTGTGCAAGGCTTG CCGC CGC GCGG TTTTCTGAAGACATC TERM 2749 2297964 - 2297929 - R 86 -11.2 -3.75015 | overlap 2297930 AGAATCGTGAGGAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAACG TCAAAGAACTTTCTA TERM 2750 2297963 - 2297930 - R 87 -14.7 -2.84527 | overlap 2297929 GAATCGTGAGGAAAT GCTGCATTGCTGACA TTTA CGCCAGCAATGCAAC GTCAAAGAACTTTCT yohC 2298588 - 2297977 - | hypothetical protein yohD 2298698 - 2299312 + | hypothetical protein TERM 2751 2299308 - 2299294 - T 80 -5.6 -5.06414 | GCGCGGGAAGAAAAA GCCGGA TCA TCAGGC GTAAAACCATTGCCC yohF 2300203 - 2299442 - | acetoin dehydrogenase yohG 2301692 - 2300256 - | multidrug resistance outer membrane protein MdtQ TERM 2752 2300342 - 2300328 - G 73 -9.2 -3.61398 | opp_overlap 2300338 CTGCCCTTGCAATAA CAGGCC ATT GGCCCG CTCACGCAGCGCGGG TERM 2753 2300745 - 2300730 - G 70 -4.6 -4.46926 | GATGTCAGGATAAAA TGCCGC TTTT GCCGCA TCAATGGTGCTTAGC TERM 2754 2302144 - 2302105 - R 83 -14.2 -2.71364 | overlap 2302093 TCACTGGCGCAAGGA GCGCGCAGGGGGCGGC CAATCGCC GCCGCCGCCTGCACCC CCGGGCTCTGGCGAA yohI 2303319 - 2302372 - | tRNA-dihydrouridine synthase C TERM 2755 2303360 - 2303339 - H 100 -8.1 -5.42259 | gap 1, opp_overlap 2303342, overlap 2303340 2303342 TCACCCGGAAAAAAA TGAGGCGCTA TGT TAGCGCCT-A TGGTCAACGGATTAA TERM 2756 2303360 - 2303340 - H 80 -9.7 -3.84633 | opp_overlap 2303342, overlap 2303339 2303342 CACCCGGAAAAAAAT GAGGCGCTA TGT TAGCGCCTA TGGTCAACGGATTAA TERM 2757 2303342 - 2303358 + H 79 -12.3 -2.78715 | opp_overlap 2303339 2303340 2303342 CCCGGAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAACGGATT TERM 2758 2303358 - 2303342 - H 88 -12.3 -3.49966 | opp_overlap 2303342, overlap 2303339 2303340 CCCGGAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAACGGATT TERM 2759 2303387 - 2303414 + H 73 -10.6 -3.0281 | opp_overlap 2303387, overlap 2303382 2303389 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGTAATCCCTC TCTATGCTTGATGTA TERM 2760 2303614 - 2303633 + G 90 -9.3 -4.4959 | TTTCGTCCTGATTTA TGCCTGC CTGTAT GCAGGCA TTTTCATTGCTTCCC yohJ 2303558 - 2303956 + | hypothetical protein yohK 2303953 - 2304648 + | hypothetical protein TERM 2761 2304658 - 2304668 + F 82 -6.8 -4.82154 | overlap 2304653 GGCTAAAATTTGCGA TGCG TCG CGCA TTTTTGATGTAAGTT cdd 2304778 - 2305662 + | cytidine deaminase TERM 2762 2305730 - 2305746 + F 89 -10.9 -4.15044 | TGGTGTCGAAATTCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC TERM 2763 2306403 - 2306413 + G 79 -4.6 -5.00884 | CTTTATATTTTTAGA CGTG AAC CGCG TTTTTTAGGGCCGCT sanA 2305812 - 2306531 + | hypothetical protein TERM 2764 2306664 - 2306647 - g 75 -5.5 -4.60924 | opp_overlap 2306649, overlap 2306649 TAAACGGGTTAAAAA TGCACCG GAAC CGGTGTA TGTCTGGCGAGCAAA SSON_2201 2306534 - 2306773 + | hypothetical protein TERM 2765 2307264 - 2307274 + F 82 -6.8 -4.76123 | overlap 2307223 CCCATTGATATCGGC CGCT TAC AGCG TTTTGTTACTGATTT TERM 2766 2307866 - 2307882 + F 86 -11.5 -3.68827 | AAAAGAGTTTACCAG CGCCCGG GAG CTGGGCG TTTCGATCATCGATG TERM 2767 2308853 - 2308842 - g 74 -5.8 -4.54821 | opp_overlap 2308842, overlap 2308825 ATCTTAATCAGAAAA TCGG TATG CCGA TCGTTAACGGAAAAT yeiA 2308199 - 2309434 + | dihydropyrimidine dehydrogenase mglC 2310571 - 2309561 - | beta-methylgalactoside transporter inner membrane component TERM 2768 2310596 - 2310633 + r 91 -8.5 -4.96848 | opp_overlap 2310600 2310602 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGTTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2312107 - 2310587 - | galactose/methyl galaxtoside transporter ATP-binding protein TERM 2769 2311467 - 2311482 + g 78 -7.6 -4.38154 | opp_overlap 2311467 2311466 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGCGAGATAT TERM 2770 2312159 - 2312137 - R 100 -14.9 -3.88232 | opp_overlap 2312150, overlap 2312150 TTGGCCATACAATAA GGGCGCAGT AAACG ACTGCGCCC AATCAGTCTTATTTC mglB 2313166 - 2312168 - | galactose-binding transport protein TERM 2771 2312269 - 2312285 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAGATCA galS 2314369 - 2313446 - | DNA-binding transcriptional regulator GalS yeiB 2315785 - 2314628 - | hypothetical protein TERM 2772 2315381 - 2315397 + g 84 -8 -4.59773 | CAGATAAAGCATGAC GCCTGT ATTAA ACAGGC TTTTTACCGATGGCG TERM 2773 2315688 - 2315718 + g 71 -9.1 -3.44848 | gap 1, opp_overlap 2315691 2315692, overlap 2315686 2315692 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAGC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 2774 2315715 - 2315691 - G 78 -10.8 -3.51924 | gap 1, opp_overlap 2315688 2315686 2315692, overlap 2315692 GCGGGATTGAGATAA GCCGCCTTTGG TAGC CCAAAGGCG-C TGATGTTTAATAGCA TERM 2775 2315715 - 2315692 - G 70 -11 -2.7094 | opp_overlap 2315688 2315686 2315692, overlap 2315691 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA TERM 2776 2315692 - 2315715 + g 71 -11 -2.87501 | opp_overlap 2315691 2315692, overlap 2315688 2315686 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA folE 2316470 - 2315802 - | GTP cyclohydrolase I TERM 2777 2317017 - 2317030 + G 70 -3.7 -4.70583 | ATGGCTACGATTTAG GCCAG GGCG CAGGC TTTTATCTTAATGCC yeiG 2316728 - 2317564 + | putative esterase TERM 2778 2317571 - 2317586 + T 76 -11.8 -2.56271 | opp_overlap 2317567 2317568, overlap 2317570 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA cirA 2319587 - 2317596 - | colicin I receptor TERM 2779 2317776 - 2317790 + g 78 -9.2 -3.87373 | CGGTGTTTTAGCCGT CGCGCT GTC GGCGCG TTTCTGCCCGGTATA TERM 2780 2317957 - 2317978 + g 72 -5.9 -4.30448 | overlap 2317970 TAGTTGATCGACAGT TTCCATTCA TCGT TGAACGGAA TTTTCAGTTCGGTTT TERM 2781 2319857 - 2319838 - R 100 -13.6 -4.75776 | AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA lysP 2321348 - 2319879 - | lysine transporter TERM 2782 2320776 - 2320741 - G 70 -6.8 -4.08945 | gap 1, opp_overlap 2320751 2320752, overlap 2320752 ATCATCGCCGCAAAA CCACCAG-CAAACGGCG CTT CGCCGATTGTCCAGTTG CTCCAGCCCGCAGGC TERM 2783 2320764 - 2320752 - G 84 -10.5 -3.83705 | opp_overlap 2320751 2320752, overlap 2320741 AAAACCACCAGCAAA CGGCG CTT CGCCG ATTGTCCAGTTGCTC yeiE 2322434 - 2321553 - | putative DNA-binding transcriptional regulator TERM 2784 2323230 - 2323204 - g 70 -6.6 -4.11216 | opp_overlap 2323191 CCCGGATGCGGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 2785 2323502 - 2323484 - g 71 -2.2 -5.00884 | AGCGCGCTGAAAAAA GCTGGGGC GAA ACCTCTGC TGATGGCACTGGTAC yeiH 2322533 - 2323582 + | hypothetical protein nfo 2323656 - 2324513 + | endonuclease IV TERM 2786 2324912 - 2324902 - g 78 -8.2 -4.18934 | overlap 2324903 CATTACTGGAAGAAA CGCG CCG CGCG GGCGTGAACGTTTCA yeiI 2324517 - 2325605 + | hypothetical protein yeiJ 2326911 - 2325661 - | putative transport system permease protein TERM 2787 2326285 - 2326270 - G 78 -9 -3.9122 | overlap 2326257 CAGGCGGGCAAACAA GATCCC GCCA GGGATC GCCATTAACGATGCC TERM 2788 2326406 - 2326442 + g 72 -7.3 -4.19735 | AATAATTCATTGCGA TTCAGACGATCGATAAA GGG TTTGACGATCGCCGGAA TTTCGTTTTGCCCGA TERM 2789 2326723 - 2326737 + g 71 -2.7 -4.82901 | overlap 2326713 CGCCATCACTTTGTG GACGC CAAAA GCGAC TTTTTCTGCGACCCA TERM 2790 2326999 - 2326964 - R 80 -9.6 -3.96148 | opp_overlap 2326966, overlap 2326966 TCTGCCCATCAGAAA TAGCCGGGCCTGCATC TTGC GATACTGTCCCGGCTT GTTATCAACACTTAA TERM 2791 2326966 - 2326997 + r 79 -10 -3.79678 | opp_overlap 2326966 2326964 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT TERM 2792 2326997 - 2326966 - R 88 -12.2 -3.57406 | opp_overlap 2326966, overlap 2326964 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT rihB 2327952 - 2327011 - | ribonucleoside hydrolase 2 TERM 2793 2327065 - 2327088 + g 90 -11.8 -3.92324 | opp_overlap 2327065 2327062 TAATCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTAGTATTGGCGGG TERM 2794 2328159 - 2328185 + G 71 -2.1 -5.02074 | opp_overlap 2328159, overlap 2328164 TTGCTTTTTAACGGA TGTTTCAGCCG ATACG CGGCTGTTTCA TTTTTTAGCGCGTGA TERM 2795 2328164 - 2328180 + G 86 -9.4 -4.42765 | opp_overlap 2328159, overlap 2328159 TTTTAACGGATGTTT CAGCCG ATACG CGGCTG TTTCATTTTTTAGCG TERM 2796 2328223 - 2328237 + G 76 -7.8 -4.18018 | GTGCAGGAAGGGCAA CAGCCG TCC TGGCTG TTTTACCTGACGCGA TERM 2797 2328243 - 2328264 + G 73 -11.5 -2.71924 | overlap 2328242 GTCCTGGCTGTTTTA CCTGACGCG AGGC CGCGCCAGG CTTTACGCCACGCTA yeiL 2328121 - 2328780 + | DNA-binding transcriptional activator YeiL TERM 2798 2328842 - 2328799 - T 71 -10.5 -2.74523 | gap 2, overlap 2328788 2328796 2328815 TTATTGGCAATAGCA CGATTGCCGGATGCAACGCTT AATA AGGCGT-ACATCCGGCAAT-G AAACTCAAGCTAAAC yeiM 2330097 - 2328847 - | putative transport system permease protein TERM 2799 2329308 - 2329325 + g 70 -6.9 -4.08216 | overlap 2329306 ATGCCATTACCACCG TCGCCAC ACCG GCGGCGA TTTTCAGCCCGGTCA TERM 2800 2329983 - 2330021 + g 70 -6 -4.27026 | opp_overlap 2329962 CACCAATGGCAATTT GCAGCAGC-AGCGCAGCG CCAAC CG-TGCGCAAGCTGATGC TCTTTTTATTTACCG TERM 2801 2330085 - 2330102 + g 70 -5.7 -4.30014 | TCCCCGCAACACTTC TCATTAT ATCC ATAATGA TTTTCCCTTCATGCC TERM 2802 2330124 - 2330141 + r 81 -8.3 -4.46493 | opp_overlap 2330124 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTTTGA TERM 2803 2330141 - 2330124 - R 83 -10.5 -3.74693 | opp_overlap 2330124 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTTTGA yeiN 2331129 - 2330191 - | hypothetical protein TERM 2804 2330230 - 2330242 + g 73 -9.1 -3.61517 | TTTGGCAATTTCGCT CGCCA GAA TGGCG TTATTAAAGACCAGT yeiC 2332058 - 2331117 - | hypothetical protein TERM 2805 2332326 - 2332307 - R 100 -9.3 -5.10461 | opp_overlap 2332320 GGCAGGCAAGAAAAA GGGCAGA GATGTT TCTGCCC TCCAGATTGTTGACA fruA 2334207 - 2332516 - | fructose-specific PTS system IIBC component TERM 2806 2333937 - 2333916 - G 74 -10.9 -3.14344 | gap 1, opp_overlap 2333903 GACCGCTGGCAGCAA CCGGT-GCTG TCG CAGCGACCGG CGCAGTGTAAGGTTT fruK 2335162 - 2334224 - | 1-phosphofructokinase fruB 2336292 - 2335162 - | bifunctional fructose-specific PTS IIA/HPr protein TERM 2807 2336380 - 2336344 - H 86 -2.9 -5.67063 | overlap 2336345 2336346 TCTATGAGAAAAAAA GCGCCAACCTGGCTT AGGGTTA AAGACAAGATCGCGC TGAAACGTTTCAAGA yeiO 2336660 - 2337841 + | putative transport TERM 2808 2338071 - 2338052 - f 71 -10 -3.27525 | gap 1, overlap 2338047 2338066 GGGCTGGAAATTGAA GGGGCAGTG CAA CAC-GCCCC GCAACCCGGACGGCA yeiP 2338247 - 2338819 + | elongation factor P TERM 2809 2338840 - 2338859 + F 100 -10 -5.46129 | opp_overlap 2338840 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA TERM 2810 2338859 - 2338840 - f 79 -7.8 -4.42386 | opp_overlap 2338840 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA yeiQ 2339042 - 2340508 + | putative oxidoreductase TERM 2811 2340519 - 2340557 + F 76 -8.1 -4.03183 | opp_overlap 2340526 TTTAACGATTTCTGC GGTTAAAGCGGATGAAG CTCAC CTTCGTCCGCTCTCCCC TTCTCTTTTCTGCCT TERM 2812 2340550 - 2340526 - f 75 -10 -3.53091 | opp_overlap 2340519 ATTTCTGCGGTTAAA GCGGATGAAG CTCAC CTTCGTCCGC TCTCCCCTTCTCTTT yeiR 2340626 - 2341612 + | hypothetical protein TERM 2813 2341672 - 2341662 - g 73 -4 -4.81734 | opp_overlap 2341662 AAATATGATTAAAAA TTTG CCG CAAA TAGTGTTGTTGAATA TERM 2814 2341912 - 2341902 - g 75 -4.6 -4.86731 | CTGGCTGAAAGAAAA CGCC CCT GGCA GACGACGTATCGTGA SSON_2230 2341615 - 2342364 + | hypothetical protein TERM 2815 2342713 - 2342724 + F 79 -2.2 -5.61596 | AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT TERM 2816 2343252 - 2343265 + G 70 -6.7 -4.08557 | overlap 2343251 GTTTGTCCATGCTTC CACCA GCAG TGGTG TTATTATTTCCAGCA spr 2342776 - 2343342 + | putative outer membrane lipoprotein TERM 2817 2343392 - 2343409 + F 100 -11.3 -5.85244 | opp_overlap 2343392 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 2818 2343409 - 2343392 - f 86 -11.3 -3.77219 | opp_overlap 2343392 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 2819 2344227 - 2344239 + G 70 -4.1 -4.72272 | CTGGACATGGAACGA TGTGT GGT ACGCA TTTTTACTGGGCGGC TERM 2820 2344805 - 2344823 + G 71 -9.6 -3.50447 | overlap 2344793 2344817 GCGCGCTTATCTATC TTGAGCGT TTT ACGCTCGA TTATCTGAAAATTGA rtn 2343523 - 2345079 + | hypothetical protein TERM 2821 2346056 - 2346037 - g 79 -2.2 -5.25803 | gap 1, overlap 2346039 2346041 AATTTCGATAAAAAA TACATCATC AAA GATGA-GCA AAAGAACGAATCAGC TERM 2822 2346195 - 2346177 - g 100 -13.2 -3.75105 | TGAATGGATGAACAA GGCGTTGT TTT ACAACGCC TGGAGTCGCACGAAC yejA 2345161 - 2346975 + | hypothetical protein TERM 2823 2347821 - 2347866 + G 80 -5.3 -5.02074 | overlap 2347834 TGTGTTCCGCAACGC CATGCTGCTGGTGATTGCCGG TTTT CCGGCGACGTTTATCAGCATG TTTTTTACCGGCTCG yejB 2346976 - 2348070 + | putative transport system permease protein TERM 2824 2348935 - 2348955 + G 70 -11.2 -2.73875 | overlap 2348932 TCGGTCTACCGCTCG GTTCACCG TCACT CGGTGAAC TGCTGTTACAAGGGA yejE 2348070 - 2349095 + | putative transport system permease protein yejF 2349097 - 2350686 + | putative ATP-binding component of a transport system yejG 2351034 - 2350690 - | hypothetical protein TERM 2825 2351351 - 2351334 - R 76 -7.7 -4.26202 | opp_overlap 2351334 ACATGCATCAACAAA GGAAGCC TTTT AGCTTCC TCGTTGTGCAATAGA TERM 2826 2352167 - 2352136 - R 73 -9.5 -3.32294 | gap 2, overlap 2352126 2352137 2352139 TCAAAGCGTTGATAA CCAC--GCTGGCCGC AGCC GCAGCCAGCCCGTGG AAGAAACGCATCACA TERM 2827 2352164 - 2352137 - R 73 -11.2 -2.59055 | overlap 2352126 2352136 2352139 CAAAGCGTTGATAAC CACGCTGGCCGC AGCC GCAGCCAGCCCG TGGAAGAAACGCATC TERM 2828 2352162 - 2352139 - R 72 -10.2 -2.83119 | overlap 2352126 2352137 2352136 AAGCGTTGATAACCA CGCTGGCCGC AGCC GCAGCCAGCC CGTGGAAGAAACGCA rsuA 2353210 - 2352515 - | 16S rRNA pseudouridylate synthase A yejH 2353360 - 2355120 + | putative ATP-dependent helicase rplY 2355245 - 2355529 + | 50S ribosomal protein L25 TERM 2829 2355545 - 2355574 + T 93 -15.9 -2.90219 | opp_overlap 2355552, overlap 2355552 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCC GCGGGGTTTTTTG TATCTGCAGATTATG TERM 2830 2355552 - 2355567 + T 100 -11.8 -5.4251 | opp_overlap 2355552, overlap 2355545 ATAAGTTGTAAAAAA CCCCGC TCCC GCGGGG TTTTTTGTATCTGCA TERM 2831 2355567 - 2355552 - T 100 -11.8 -5.06103 | opp_overlap 2355552 2355545 ATAAGTTGTAAAAAA CCCCGC TCCC GCGGGG TTTTTTGTATCTGCA yejK 2356675 - 2355668 - | nucleoid-associated protein NdpA TERM 2832 2356817 - 2356806 - H 100 -5.8 -6.04378 | opp_overlap 2356806 2356816 AAAGCAGAAAAAAAA CCGT TGCT ACGG TAATATGTTGCCCTT yejL 2356857 - 2357084 + | hypothetical protein TERM 2833 2357502 - 2357536 + G 81 -6.5 -4.78572 | gap 1, overlap 2357505 AAATGAGATGGCGCG CGACTGGCA-GCTGAT GTTC ATCAGCGTGCCGGTTA TTTTATTGCTTGAAC TERM 2834 2357505 - 2357533 + G 93 -10.4 -4.48997 | gap 1, overlap 2357502 TGAGATGGCGCGCGA CTGGCA-GCTGAT GTTC ATCAGCGTGCCGG TTATTTTATTGCTTG TERM 2835 2357941 - 2357954 + G 76 -8.1 -4.25104 | opp_overlap 2357934 2357939, overlap 2357953 TTCGAGAAGCAGATG CCTGC GCTG GCAGG TTTTGCTGAGCAAAA yejM 2357104 - 2358864 + | putative sulfatase TERM 2836 2358850 - 2358890 + T 71 -9.9 -3.24825 | opp_overlap 2358847, overlap 2358848 2358852 ACAGACGAGAAGCGT TTTATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAATA TCTTACTTGCAATCG TERM 2837 2358852 - 2358888 + T 81 -12.5 -3.18634 | opp_overlap 2358847, overlap 2358850 2358848 AGACGAGAAGCGTTT TATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAA TATCTTACTTGCAAT TERM 2838 2359049 - 2359033 - T 100 -8 -5.4756 | opp_overlap 2359033 2359025 AATCCCAAGAAAAAA CCAACC TTTAC GGTTGG TTTTTTTATATCTGC TERM 2839 2359033 - 2359049 + T 100 -8 -5.76633 | opp_overlap 2359033, overlap 2359025 AATCCCAAGAAAAAA CCAACC TTTAC GGTTGG TTTTTTTATATCTGC TERM 2840 2359076 - 2359107 + T 93 -8.8 -4.73682 | opp_overlap 2359080, overlap 2359080 CTGCAATTAATTTGA TAAACAGACCGTGA CACA TCACAGCCTGTTTA TTTTCTGTTATCAGA TERM 2841 2359080 - 2359103 + T 76 -5.2 -4.89519 | opp_overlap 2359080, overlap 2359076 AATTAATTTGATAAA CAGACCGTGA CACA TCACAGCCTG TTTATTTTCTGTTAT TERM 2842 2359103 - 2359080 - T 80 -9.6 -3.93638 | opp_overlap 2359080 2359076 AATTAATTTGATAAA CAGACCGTGA CACA TCACAGCCTG TTTATTTTCTGTTAT TERM 2843 2359857 - 2359884 + T 71 -9.8 -3.23853 | overlap 2359855 TGCTCAAAGCCAGCT CCCGCATCAGTG GTCA CGTTGTTGCGGG TGTTAATTGCCGAAC SSON_2246 2361767 - 2361132 - | IS2 ORF2 TERM 2844 2362675 - 2362655 - g 77 -9.7 -3.59979 | overlap 2362659 2362669 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 2845 2362671 - 2362659 - g 75 -6.9 -4.44046 | overlap 2362655 2362669 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_2247 2361833 - 2363005 + | IS21 ORF1 SSON_2248 2363005 - 2363802 + | IS21 ORF2 SSON_2249 2364171 - 2363812 - | IS2 ORF2 narP 2365276 - 2365923 + | transcriptional regulator NarP TERM 2846 2365927 - 2365954 + T 89 -6.3 -5.35815 | gap 1, opp_overlap 2365927 2365929, overlap 2365928 2365929 GGGGCACAATAAAAA TA-GCCCGATGG CATCA CCATCGGGCCTC TTTTTATTTACTCTC TERM 2847 2365953 - 2365927 - T 100 -10.8 -5.18726 | opp_overlap 2365927 2365928 2365929, overlap 2365929 GGGGCACAATAAAAA TAGCCCGATGGC ATC ACCATCGGGCCT CTTTTTATTTACTCT TERM 2848 2365928 - 2365952 + T 91 -11.4 -4.29436 | opp_overlap 2365927 2365929, overlap 2365927 2365929 GGGCACAATAAAAAT AGCCCGATGG CATCA CCATCGGGCC TCTTTTTATTTACTC TERM 2849 2365951 - 2365929 - T 100 -15.6 -4.22377 | opp_overlap 2365928 2365927 2365929, overlap 2365927 GGCACAATAAAAATA GCCCGATGGC ATC ACCATCGGGC CTCTTTTTATTTACT TERM 2850 2365929 - 2365951 + T 90 -14.9 -3.16035 | opp_overlap 2365929 2365927, overlap 2365928 2365927 GGCACAATAAAAATA GCCCGATGG CATCA CCATCGGGC CTCTTTTTATTTACT ccmH 2367010 - 2365958 - | subunit of heme lyase TERM 2851 2366231 - 2366246 + g 72 -4.7 -4.62069 | CGCTTCAGCATAACC CAGTG CGGCAT CACTG TTTTTCGGATCGAGG TERM 2852 2367017 - 2367005 - G 77 -3.3 -5.07486 | CATGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT dsbE 2367564 - 2367007 - | disulfide oxidoreductase ccmF 2369504 - 2367561 - | cytochrome c-type biogenesis protein TERM 2853 2368022 - 2368000 - G 70 -7 -4.07885 | TAGTTCTGGCTAAAA GCAATGCCAA CAA TTGTCACTGC CAGCCCCAGGTGAGC TERM 2854 2369222 - 2369171 - G 72 -4.3 -4.72986 | gap 1 TACGCTGACTAAAAA TCGCCACCGC-AAAGGTCCAGCCG CTCAT CAGCAGCACCCACAGCAGTAGCGA GCCTTCATGCGCGCC TERM 2855 2369418 - 2369385 - G 72 -8.1 -3.9693 | CAGCCAGGCAAACAA GCGGGAAGACGCG ATCATGCG CGCATCTCCGCGC GCCACGCCCCATAGC ccmE 2369980 - 2369501 - | cytochrome c-type biogenesis protein CcmE ccmD 2370186 - 2369977 - | heme exporter protein C TERM 2856 2370144 - 2370133 - G 95 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2370920 - 2370183 - | heme exporter protein C TERM 2857 2370340 - 2370305 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2370305 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2371624 - 2370962 - | heme exporter protein B, cytochrome c-type biogenesis protein TERM 2858 2371093 - 2371077 - G 72 -10.8 -3.11732 | overlap 2371072 2371069 GGCAAATGCATGGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG ccmA 2372238 - 2371621 - | cytochrome c biogenesis protein CcmA napC 2372859 - 2372257 - | cytochrome c-type protein NapC TERM 2859 2372683 - 2372709 + g 85 -6.6 -4.74504 | ACGCATTTCGTGGCA GCTAATGCAGAA CTC TTCGGTATTGGC TTTTTCCATTCCGGT napB 2373318 - 2372869 - | diheme cytochrome c550 TERM 2860 2372983 - 2372960 - G 70 -5.9 -4.18674 | overlap 2372961 TGCAGACAGAAATAA CGACGCGGA GCCACT TCCGCGCCC ACTTTGCCGTCGCTG napH 2374178 - 2373315 - | quinol dehydrogenase membrane component TERM 2861 2373651 - 2373627 - G 86 -3.5 -5.35815 | overlap 2373641 TAGATCAAATAAAAA CAGCGCG AGAATAAGCAG CGCGCCG CTGCCGAAGCCCATT TERM 2862 2373655 - 2373641 - G 88 -11.4 -3.80174 | overlap 2373627 ACAGCGCGAGAATAA GCAGCG CGC CGCTGC CGAAGCCCATTACCA napG 2374860 - 2374165 - | quinol dehydrogenase periplasmic component TERM 2863 2374722 - 2374753 + g 81 -12.4 -3.21276 | gap 1, overlap 2374726 TGGCTCCGGGCGGGC GCAA-CCGCACGC CAGATGC GCGTGCGGTTTGC TGTTGTAACCCCAGC TERM 2864 2374726 - 2374748 + g 90 -12 -3.97088 | overlap 2374722 TCCGGGCGGGCGCAA CCGCACGC CAGATGC GCGTGCGG TTTGCTGTTGTAACC napA 2377353 - 2374867 - | nitrate reductase napD 2377613 - 2377350 - | assembly protein for periplasmic nitrate reductase napF 2378097 - 2377603 - | ferredoxin-type protein TERM 2865 2378240 - 2378230 - H 71 -6.8 -4.08767 | CCGATCGGGGTAAAA CCTG TAG CAGG ATCAAAAGAGTGGCG eco 2378505 - 2378993 + | ecotin precursor TERM 2866 2379303 - 2379257 - T 70 -10.8 -2.57931 | opp_overlap 2379262, overlap 2379256 CGTAGGTCGGATAAG GCGGTTACGCCACATCCGGCAT ACC ATGCCGGATGTGGCACATCATT ACAACGCAATATCCG TERM 2867 2379262 - 2379298 + T 100 -18.1 -2.71011 | opp_overlap 2379257 2379256 GTCGGATAAGGCGGT TACGCCACATCCGGCAT ACC ATGCCGGATGTGGCACA TCATTACAACGCAAT yojH 2380948 - 2379302 - | malate:quinone oxidoreductase TERM 2868 2380356 - 2380366 + g 72 -6.8 -4.19624 | CCAATTTCCGTACGC GTGG CTG CCAC TTTCTGTTGCGGATC TERM 2869 2380580 - 2380550 - G 78 -9.6 -3.92641 | overlap 2380551 2380554 AACGGTATTGATAAA TGAACGCGGAGTAC GCA GCACGCCGCGCTCG ACCTGGTGCGCCCAG TERM 2870 2380579 - 2380551 - G 82 -13.1 -2.95102 | overlap 2380550 2380554 ACGGTATTGATAAAT GAACGCGGAGTAC GCA GCACGCCGCGCTC GACCTGGTGCGCCCA TERM 2871 2380576 - 2380554 - G 81 -11.2 -3.61988 | overlap 2380551 2380550 GTATTGATAAATGAA CGCGGAGTAC GCA GCACGCCGCG CTCGACCTGGTGCGC TERM 2872 2381155 - 2381125 - R 81 -12.6 -3.22475 | opp_overlap 2381117 2381115, overlap 2381123 2381126 GGGATTTTTAGAATA TTGACCTGGCGG CAGCAGT CCGCCAGGTCAG CGTCGTAATATTATG TERM 2873 2381154 - 2381126 - R 90 -16.1 -2.53271 | opp_overlap 2381117 2381115, overlap 2381125 2381123 GGATTTTTAGAATAT TGACCTGGCGG CAGCAGT CCGCCAGGTCA GCGTCGTAATATTAT yojI 2382809 - 2381166 - | multidrug transporter membrane component/ATP-binding component TERM 2874 2381431 - 2381441 + g 79 -2.4 -5.28826 | opp_overlap 2381430 2381432, overlap 2381422 GCCAGCGCCAGCAAC AGCG CCA CGCG TTTTTTCTGCCCTTT alkB 2383535 - 2382885 - | DNA repair system specific for alkylated DNA ada 2384599 - 2383535 - | O6-methylguanine-DNA methyltransferase yojL 2385728 - 2384673 - | thiamine biosynthesis lipoprotein ApbE TERM 2875 2385825 - 2385798 - R 80 -12.8 -3.10622 | opp_overlap 2385805, overlap 2385805 TACGCTGAAAACAAT GAAAAAAGGGCC CGCA GGCCCTTTGTTC GATATCAATCGAGAT TERM 2876 2385805 - 2385818 + r 87 -9.5 -4.23213 | opp_overlap 2385798 2385805 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA TERM 2877 2385818 - 2385805 - R 100 -9.5 -5.43514 | opp_overlap 2385805, overlap 2385798 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA ompC 2386946 - 2385840 - | outer membrane porin protein C SSON_2274 2387703 - 2387200 - | IS1 ORF TERM 2878 2388124 - 2388142 + H 100 -14.6 -5.81032 | TTACCCCTATTTCAA CCGGATGC CTC GCATCCGG TTTTTTTTACCCTTC TERM 2879 2389828 - 2389802 - g 70 -5 -4.56978 | opp_overlap 2389810 CTGGTAAACAAGAAA CTCAAGCAGGCG CAG CGTCTGTATGAG AAAAACCAGCAGGGC TERM 2880 2389846 - 2389834 - g 86 -6.9 -4.91109 | TCTGTATGAGAAAAA CCAGC AGG GCCGG ATGACCTTTATGAAA yojN 2388461 - 2391133 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC rcsB 2391150 - 2391800 + | transcriptional regulator RcsB TERM 2881 2391810 - 2391843 + T 95 -14.7 -3.55622 | opp_overlap 2391820, overlap 2391811 2391823 GACTAATCACCTGTA GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA TTTGCACCGATTGCC TERM 2882 2391811 - 2391842 + T 100 -18.2 -2.73159 | opp_overlap 2391820, overlap 2391810 2391823 ACTAATCACCTGTAG GCCAGATAAGACGC GTTA GTGTCTTATCTGGC ATTTGCACCGATTGC TERM 2883 2391924 - 2391957 + T 75 -9.5 -3.61178 | opp_overlap 2391921 2391924 2391934 2391936 2391937, overlap 2391925 2391936 2391937 GATTACATCAAAGTA GGCCAGATAAGACGC GTCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 2884 2391957 - 2391924 - T 78 -11.7 -3.00585 | opp_overlap 2391924 2391925 2391936 2391937, overlap 2391921 2391934 2391936 2391937 GATTACATCAAAGTA GGCCAGATAAGACGC GTCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 2885 2391925 - 2391956 + T 82 -13 -2.76492 | opp_overlap 2391924 2391921 2391934 2391936 2391937, overlap 2391924 2391936 2391937 ATTACATCAAAGTAG GCCAGATAAGACGC GTCA GCGTCGCATCTGGC ATTTGCACTGAATGC rcsC 2394849 - 2392000 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 2886 2394467 - 2394446 - G 75 -4.5 -4.8543 | gap 1, overlap 2394450 TAAGCCGCAGAAAAA TTATCGCGCC AGT AGCGC-ATAA ACCACGCCAATGACT TERM 2887 2394547 - 2394566 + g 86 -10.7 -3.96148 | opp_overlap 2394537 2394535 2394547 AAACAGCGGTTCAAA CGCAGGC ACATCC GCCTGCG TTTCTCGTCCACGCG TERM 2888 2394566 - 2394547 - G 82 -11.4 -3.55815 | opp_overlap 2394547, overlap 2394537 2394535 AAACAGCGGTTCAAA CGCAGGCA CATC CGCCTGCG TTTCTCGTCCACGCG TERM 2889 2396184 - 2396142 - g 86 -9 -4.41348 | overlap 2396146 CTGCCCGCAAAGAAA CCCAGCGCCGCATGGCGC AAGCAGA ACGCCTCGCCACACTGGG TGAGCTGATGGCTGG TERM 2890 2396678 - 2396668 - g 91 -5.4 -5.40072 | opp_overlap 2396668 CTCGCTGCAAAAAAA GATC TTC GATC CCTTTTTCACCACCA atoS 2395016 - 2396842 + | sensory histidine kinase AtoS TERM 2891 2397112 - 2397141 + G 77 -11.5 -3.26444 | gap 1, opp_overlap 2397107 2397108, overlap 2397108 GAAGTGGAAACCGCC GTCGAAGCGCTACG CTG CGGAGC-CTTCGAC TATGTTATTAAACCG atoC 2396839 - 2398224 + | acetoacetate metabolism regulatory protein AtoC TERM 2892 2398278 - 2398233 - f 100 -13.5 -4.46656 | gap 1, opp_overlap 2398233 2398249, overlap 2398234 2398235 TGTATAACACCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCC-G CTCATTCTCCTTATA TERM 2893 2398233 - 2398279 + F 72 -10.2 -2.90904 | opp_overlap 2398233 2398234 2398235, overlap 2398249 TGTATAACACCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCGC TCATTCTCCTTATAA TERM 2894 2398278 - 2398234 - f 86 -13.7 -3.27271 | opp_overlap 2398233 2398249, overlap 2398233 2398235 GTATAACACCAAAAC TTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCG CTCATTCTCCTTATA TERM 2895 2398277 - 2398235 - f 100 -17.2 -2.5564 | opp_overlap 2398233 2398249, overlap 2398233 2398234 TATAACACCAAAACT TGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCC GCTCATTCTCCTTAT atoD 2398420 - 2399082 + | acetyl-CoA:acetoacetyl-CoA transferase subunit alpha atoA 2399082 - 2399732 + | acetyl-CoA:acetoacetyl-CoA transferase beta subunit TERM 2896 2399745 - 2399760 + G 75 -6.8 -4.3739 | TGATTGGTCGCATAT CGCGTT TTAT GACGCG TTTTGTCAGCCGATG TERM 2897 2400022 - 2400004 - g 82 -11.7 -3.53012 | opp_overlap 2399997 CGCCTCCGCCGCAAA GACGCCC GTACA GGGCGTC ATGCTGGTCACTTTC TERM 2898 2400233 - 2400221 - g 72 -10.5 -3.01712 | CTGTTGGCTGCAACA CCGGG CAA CCCGG TTGAGCATATCGCCG atoE 2399729 - 2401051 + | short chain fatty acid transporter atoB 2401082 - 2402266 + | acetyl-CoA acetyltransferase TERM 2899 2402311 - 2402267 - T 79 -11 -3.3482 | gap 1, opp_overlap 2402277 2402279, overlap 2402277 GAACGGTTGAATTAA TCAATAAAAACACCCGATAGC GAAA GTTATCGGGCGTTTTC-TTGA ACATCGACGGCGAAG TERM 2900 2402302 - 2402277 - T 100 -9.7 -5.20534 | opp_overlap 2402277 2402279, overlap 2402267 ATTAATCAATAAAAA CACCCGATAGC GAAA GTTATCGGGCG TTTTCTTGAACATCG TERM 2901 2402277 - 2402302 + T 93 -9.7 -4.64676 | opp_overlap 2402267 2402277, overlap 2402279 ATTAATCAATAAAAA CACCCGATAGC GAAA GTTATCGGGCG TTTTCTTGAACATCG TERM 2902 2402279 - 2402300 + T 73 -10.9 -2.62512 | opp_overlap 2402277 2402267, overlap 2402277 TAATCAATAAAAACA CCCGATAGC GAAA GTTATCGGG CGTTTTCTTGAACAT SSON_2284 2403116 - 2402340 - | hypothetical protein TERM 2903 2402574 - 2402586 + g 82 -7.7 -4.57073 | CGTGACATCCATATC CAGTG CAC CACTG TTTTTCAGCACGGTG TERM 2904 2403018 - 2402989 - G 70 -3.6 -4.60041 | gap 2, overlap 2402990 ATCGATTGTGAAAAA CTGGCATCTTCGCC CTCT GCCG--GATGCCAG CCAGAGAGCGGTGCG SSON_2285 2404770 - 2403121 - | hypothetical protein TERM 2905 2403359 - 2403374 + g 95 -6 -5.40072 | opp_overlap 2403359, overlap 2403360 TCGCCTTGTAATATA CGCCGC CACT GCGGCA TTTTTTTCGCCAGCC TERM 2906 2403360 - 2403373 + g 76 -9.5 -3.83561 | opp_overlap 2403359, overlap 2403359 CGCCTTGTAATATAC GCCGC CACT GCGGC ATTTTTTTCGCCAGC TERM 2907 2403655 - 2403645 - G 70 -6.8 -4.05446 | opp_overlap 2403648, overlap 2403647 2403648 CTGGCGAAGCAGAAA CACG CTG CGTG GCGCTGCTGTCGGGG TERM 2908 2404669 - 2404695 + g 76 -10.8 -3.29829 | overlap 2404670 CAGCTGATACAGTTG ATCGTGCTGCGC ACC GCGCAGCACCAG TTGTAACGGCGTCTC TERM 2909 2404670 - 2404694 + g 84 -14.3 -2.57683 | overlap 2404669 AGCTGATACAGTTGA TCGTGCTGCGC ACC GCGCAGCACCA GTTGTAACGGCGTCT TERM 2910 2405046 - 2405064 + r 71 -10.2 -2.72344 | TTGTGCGCTCAACGT CGGCTCCC GGC GGGAGCGG TACTTCCACCTGACC TERM 2911 2405879 - 2405900 + r 74 -10.9 -2.79679 | GGCATGTTATCCGCC TGCTCGGCA TAAC TGTCGAGCA TATGCTGCCAGTATT SSON_2287 2407005 - 2406502 - | IS1 ORF yfaA 2408732 - 2407233 - | hypothetical protein TERM 2912 2408047 - 2408062 + g 79 -4.6 -5.00616 | GCGCTGACCACGATG CGCTGG CGTA CTGGCG TTTTTTCAGCAGCAC TERM 2913 2408097 - 2408108 + g 74 -2.2 -5.03314 | opp_overlap 2408094, overlap 2408094 TTCCAGGCCAAAGCT TGCT TGCC AGCG TTTTTTGCCGCTCAA TERM 2914 2408373 - 2408343 - G 72 -7.6 -3.92542 | overlap 2408346 2408368 2408369 2408371 GGTAGCGGCAAACAA CAATGGCTCCAGCA GTT TGCTTAAACCACTG CGCTGGATCAGCACC TERM 2915 2408918 - 2408897 - R 81 -8.7 -4.55023 | opp_overlap 2408897, overlap 2408892 CCTAATACGACAAAA GCCCAGACT TTGC AGCCTGGAC TTTTCAATTCAAACA TERM 2916 2408935 - 2408948 + r 76 -8.1 -4.13767 | opp_overlap 2408935 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA TERM 2917 2408948 - 2408935 - R 74 -8.1 -4.0098 | opp_overlap 2408935 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA gyrA 2411597 - 2408970 - | DNA gyrase subunit A TERM 2918 2410725 - 2410745 + g 82 -2.4 -5.45802 | overlap 2410717 AGACTCGTCACGCAG CGCGCTGA TGCCT TCCACGCG TTTTTCTTTTACCAG ubiG 2411744 - 2412466 + | 3-demethylubiquinone-9 3-methyltransferase TERM 2919 2412499 - 2412513 + F 73 -10 -3.30124 | overlap 2412494 2412510 GCCAATGCCTGATGC GACGCT TGC AGCGTC TTATCAGGCCTACAA TERM 2920 2412510 - 2412554 + F 88 -12.3 -3.53811 | opp_overlap 2412551, overlap 2412499 2412541 ATGCGACGCTTGCAG CGTCTTATCAGGCCTAC AAATGCTCTCC GTAGGCCAGATAAGGCG TTTACGCCGCATCCG TERM 2921 2412634 - 2412621 - f 71 -3.7 -4.87665 | overlap 2412622 2412623 CGTCATCGACAAAAA CCCTG CCGT CTGGG CAAAATCATCACTCC SSON_2291 2415858 - 2416763 + | insertion element IS2 transposase InsD TERM 2922 2420212 - 2420200 - g 70 -4.8 -4.4959 | opp_overlap 2420210 GTGAATCAATCAAAA CGCA CGGCC TGCG TAACTCTACGCTTTC nrdA 2418378 - 2420663 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2923 2420733 - 2420690 - f 90 -13.3 -3.53811 | opp_overlap 2420682 2420698, overlap 2420730 2420732 CGGATGCGGCGTAAA CGCCTTATCCGGCCTAC GGCTCGGTTT GTAGGCCTGATAAGACG CGCCAGCGTCGCATC TERM 2924 2420784 - 2420801 + F 71 -7.7 -3.88291 | gap 1 AGCGTGAACGCCTTA TCCG-GCC TAC GGCTCGGA TTTGTAGGCCTGATA nrdB 2420897 - 2422027 + | ribonucleotide-diphosphate reductase subunit beta yfaE 2422027 - 2422281 + | 2Fe-2S ferredoxin YfaE inaA 2422984 - 2422358 - | hypothetical protein SSON_2297 2424023 - 2423355 - | IS600 ORF2 TERM 2925 2424455 - 2424435 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 2926 2424807 - 2424796 - g 77 -5.8 -4.63218 | opp_overlap 2424801 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SSON_2298 2424376 - 2425215 + | IS911 ORF2 SSON_2299 2425763 - 2425461 - | IS600 ORF1 TERM 2927 2425957 - 2425932 - R 93 -15.5 -2.86743 | overlap 2425934 AAATTTGATATGAGA CAGGATGGCGC ATGA ACGCCATCCTG CAGTAGCATTACTCT TERM 2928 2425955 - 2425934 - R 80 -12.3 -2.97925 | overlap 2425932 ATTTGATATGAGACA GGATGGCGC ATGA ACGCCATCC TGCAGTAGCATTACT glpQ 2427042 - 2425966 - | glycerophosphodiester phosphodiesterase glpT 2428405 - 2427047 - | sn-glycerol-3-phosphate transporter TERM 2929 2427252 - 2427268 + g 79 -3.5 -5.08824 | AGCCCGGTAAAGCCC GCTGCCG TAC CTGCCGC TTTTTTCGGTGCCAG TERM 2930 2427445 - 2427430 - G 71 -2.4 -4.99043 | GTGTCATAAAGAAAA CGCCGG TTGC CCCACG GTTGCCACGGAAGAC TERM 2931 2428141 - 2428126 - G 70 -6 -4.25104 | CTGCGGGCAGGAAAA CGCGCG GATT CGAGCG ATCCGATACCGAACC glpA 2428678 - 2430306 + | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 2932 2430380 - 2430365 - g 72 -4.6 -4.66833 | CTGCAACTGCAAAAA CACGGC CTGC GCTGTG CCATTGTCACGCGTG TERM 2933 2431318 - 2431308 - g 74 -8.2 -3.86897 | TTGATGTGCTACAAA CCGC CAC GCGG GGTGAATGGTATAAG glpB 2430296 - 2431555 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2431552 - 2432742 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 2934 2432755 - 2432782 + F 100 -14.2 -4.65895 | TAAACTCCTTTCTGA TGCCCGGTAAGC ATGT GGTTACCGGGCA TTTTTGCGTACACGA yfaD 2432935 - 2433837 + | hypothetical protein SSON_2306 2434681 - 2433878 - | putative aldolase SSON_2307 2436027 - 2434699 - | putative transport protein TERM 2935 2435830 - 2435814 - G 77 -3 -5.03227 | gap 1 ATACCACAAAGAAAA TGC-CTG CTCC CAGCGCA TAAGCTTCATTACTC SSON_2308 2437331 - 2436045 - | putative racemase TERM 2936 2437003 - 2436985 - GR 78 -5.2 -4.77165 | TTTTCGACAATAAAA CAGCCCAT TTC ACCGGCTG TCGAAACAGCGAATC TERM 2937 2437019 - 2437029 + gr 70 -4.6 -4.54821 | TCGAAACAGCGAATC CGGT CTG GCCG TTTTCTGCTTCGACT SSON_2309 2438046 - 2437264 - | putative regulator SSON_2310 2439468 - 2438266 - | competence damage-inducible protein A TERM 2938 2438972 - 2438954 - G 87 -4.5 -5.27335 | gap 1, overlap 2438955 TGTGGTAAAGAAAAA CGCTCGCG CAGG CGCG-GCA GGATTTCGTGCTCGA TERM 2939 2439560 - 2439538 - R 79 -11.2 -3.38832 | overlap 2439551 TAGTAAGAAACTGAA TGGCGCGACA GAA TGCCGCGCCG GAAGGGATCAGAAAC SSON_2311 2440131 - 2439568 - | hypothetical protein yfaO 2440389 - 2440814 + | hypothetical protein TERM 2940 2440842 - 2440821 - T 82 -13.1 -2.93073 | opp_overlap 2440811, overlap 2440804 2440818 CTTCTTTAACAATGA TGACAGCCA TCAC TGGCTGTCA GATTGAAAATTTAGT ais 2441455 - 2440853 - | protein induced by aluminum SSON_2314 2441763 - 2442902 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase SSON_2315 2442906 - 2443874 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2941 2444096 - 2444108 + G 91 -7.7 -5.0432 | overlap 2444093 2444094 CGCATTGCCCAACTC TCACC AGA GGTGA TTTTCTCTTTTTATT TERM 2942 2445334 - 2445314 - g 70 -4 -4.59773 | GCCTATGGCGAAAAA GAGGGT TTACAGTTC ACCCTC TTCCGCCCGTTTAAC SSON_2316 2443874 - 2445856 + | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase TERM 2943 2445892 - 2445917 + G 70 -11.2 -2.79679 | gap 1 GATGTCGATACCTTT CGTGGCAC-CC GTGAA GGCGTGCCACG TCTGCTGGAAATCTT SSON_2317 2445853 - 2446743 + | hypothetical protein TERM 2944 2446965 - 2446926 - g 75 -5.7 -4.59773 | opp_overlap 2446926 2446924 2446927 2446964, overlap 2446927 CGTTATTTCGAAAAA CCCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGGC TATTTGGCGCGAATA TERM 2945 2447775 - 2447753 - g 81 -4.8 -5.14563 | opp_overlap 2447756 GCTGGCAGCAAAAAA TAATCCTCTG GCG CTGCGGATTA ATGGCTGGATTAACA arnT 2446743 - 2448395 + | 4-amino-4-deoxy-L-arabinose transferase TERM 2946 2448595 - 2448575 - f 73 -11.1 -2.59431 | opp_overlap 2448574 2448571, overlap 2448571 GTCTTGCAGAACGTA CCGGTAGGC ATT GCCTACCCG ATGTTAAGTCTGAAT TERM 2947 2448660 - 2448685 + F 72 -8.9 -3.53444 | opp_overlap 2448653 GGCACGAACCGGTAT CGCCGCGTCAC TGGT GTGGGGTGGCG TTCATTATTGGCGGC SSON_2319 2448727 - 2449113 + | hypothetical protein pmrD 2449403 - 2449107 - | polymyxin resistance protein B menE 2450838 - 2449417 - | O-succinylbenzoic acid--CoA ligase TERM 2948 2450722 - 2450757 + g 70 -9.7 -3.25015 | gap 1, opp_overlap 2450722 2450710 AAAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG TERM 2949 2450757 - 2450722 - G 75 -11.9 -3.06312 | gap 1, opp_overlap 2450722, overlap 2450710 AAAGCCCGTAGCTAA CTCATC-GACGCGAGC ACAAA GCTCGCGCCAGTTGAG TTGCTCGTCATTAAG menC 2451797 - 2450835 - | O-succinylbenzoate synthase TERM 2950 2451197 - 2451214 + g 81 -9.1 -4.09511 | opp_overlap 2451196 TTTCACGGGCAAACG CTCGCGA ATCA TCGCGGG TTTTGCACGGCTCTT TERM 2951 2451711 - 2451721 + g 85 -8.2 -4.57837 | opp_overlap 2451711 2451710 2451708 CAGGCAAACATACAG CCCG TCG CGGG TTTTTAACCGCCTGT menB 2452654 - 2451797 - | naphthoate synthase TERM 2952 2452699 - 2452676 - R 84 -10.4 -3.91897 | gap 1, opp_overlap 2452689 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATAACGCCAGCGGGA yfbB 2453427 - 2452669 - | acyl-CoA thioester hydrolase YfbB TERM 2953 2452704 - 2452729 + g 74 -9.7 -3.48276 | gap 1, opp_overlap 2452704, overlap 2452689 CCAGACTTGCGATAA CGC-CAGCGGGA TTT TCCCGATGCGCG TTATGTCCGGCGCGA TERM 2954 2452729 - 2452704 - G 72 -9.7 -3.30771 | gap 1, opp_overlap 2452689 2452704 CCAGACTTGCGATAA CGC-CAGCGGGA TTT TCCCGATGCGCG TTATGTCCGGCGCGA TERM 2955 2452836 - 2452825 - G 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 2956 2452894 - 2452860 - G 70 -10.8 -2.80796 | gap 1, opp_overlap 2452893, overlap 2452859 2452862 2452880 2452881 GGTTAGCACGTAAAT CAGGCTGGACGGCGA GAGAAG TCGCC-TCCAGCATG GCGGCAAGGGTTGCG TERM 2957 2453381 - 2453403 + g 72 -7 -4.18494 | opp_overlap 2453379 2453376, overlap 2453380 2453384 TGCAAAAACACCAGC CAGGGTAAAC CTG GTTTGCCGTG TTTTGCCTGCGCGTG menD 2455094 - 2453424 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 2958 2454454 - 2454464 + g 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CGC GCTG TTTTTCACTTTCCAG menF 2456478 - 2455183 - | isochorismate hydroxymutase 2 TERM 2959 2455617 - 2455636 + g 71 -2.1 -4.91109 | AGATATCTTCCACCA CCAGC ATATTCTCGC GCTGG TTTTTATCATCCGCC TERM 2960 2456543 - 2456513 - R 82 -13.4 -2.85847 | opp_overlap 2456501 AAGCCTCACATTATA CGGGGTACTACA AAAAAAA TGCAGTACCCCG GTGTAGGGAGGTTTT elaB 2456862 - 2456557 - | hypothetical protein elaA 2457300 - 2456917 - | hypothetical protein elaC 2457443 - 2458360 + | ribonuclease Z SSON_2330 2458616 - 2459119 + | IS1 ORF SSON_2331 2460212 - 2459709 - | IS1 ORF yfbM 2460479 - 2460919 + | hypothetical protein TERM 2961 2461004 - 2461024 + T 74 -8.2 -3.97368 | opp_overlap 2461005, overlap 2461005 AGGGCACCAAAAAAA ACCGCCGA ACATG TCGGCGGC TTTCTGACTTACAAA TERM 2962 2461023 - 2461005 - T 100 -11.7 -5.86061 | opp_overlap 2461004 2461005 GGGCACCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA TERM 2963 2461005 - 2461023 + T 78 -11.7 -2.981 | opp_overlap 2461005, overlap 2461004 GGGCACCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA nuoN 2462505 - 2461048 - | NADH dehydrogenase subunit N TERM 2964 2461687 - 2461675 - G 73 -9.1 -3.67296 | overlap 2461683 GATGATGGAGGCAAA GGCGA TAA TCGCC AGCACCACGCGAATC nuoM 2464041 - 2462512 - | NADH dehydrogenase subunit M TERM 2965 2463475 - 2463465 - G 74 -2.4 -5.10461 | overlap 2463469 TGTAGTGAACAAAAA CCAG CGC CAGG ATGGCAATCAACATC TERM 2966 2464125 - 2464167 + r 71 -7.7 -3.88232 | gap 1, overlap 2464126 TCTCTTCGGACTGGG GGTAGTGTCGGATGCACCGC GAAG GCGGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 2967 2464126 - 2464166 + r 74 -11.2 -2.92618 | gap 1, overlap 2464125 CTCTTCGGACTGGGG GTAGTGTCGGATGCACCGC GAAG GCGGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2466046 - 2464205 - | NADH dehydrogenase subunit L TERM 2968 2464701 - 2464719 + g 72 -4.6 -4.68601 | overlap 2464699 CTGTGAGTTACCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT TERM 2969 2465531 - 2465512 - G 78 -7.8 -4.33165 | CGAAAGCGAGGAAAA CGTCACCC ACAC GGGTCACG ACGAACGCTTTCATT nuoK 2466345 - 2466043 - | NADH dehydrogenase subunit K nuoJ 2466896 - 2466342 - | NADH dehydrogenase subunit J nuoI 2467450 - 2466908 - | NADH dehydrogenase subunit I nuoH 2468442 - 2467465 - | NADH dehydrogenase subunit H TERM 2970 2468285 - 2468265 - G 90 -14.7 -2.71364 | TCATGTCCGCAACCA GCTGGAGCG AAC CGCCCCAGC CAACACGGTTAGGTC nuoG 2471171 - 2468439 - | NADH dehydrogenase subunit G TERM 2971 2470402 - 2470413 + g 70 -5.8 -4.18018 | TAGTGGTTTACCGTA CCGT TGTA ACGG TTTTCGATACGACGC TERM 2972 2471057 - 2471038 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2472555 - 2471218 - | NADH dehydrogenase I subunit F TERM 2973 2472478 - 2472492 + g 81 -10 -3.96148 | overlap 2472477 GCTGCGGTATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2473052 - 2472552 - | NADH dehydrogenase subunit E nuoC 2474857 - 2473055 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 2974 2474577 - 2474566 - G 72 -5.8 -4.41548 | opp_overlap 2474575, overlap 2474574 2474575 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 2975 2474598 - 2474574 - G 74 -3.3 -4.89729 | opp_overlap 2474575, overlap 2474566 2474575 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT nuoB 2475613 - 2474951 - | NADH dehydrogenase subunit B nuoA 2476072 - 2475629 - | NADH dehydrogenase subunit A TERM 2976 2475774 - 2475760 - G 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC TERM 2977 2476624 - 2476659 + r 89 -8.9 -4.67556 | opp_overlap 2476627, overlap 2476625 2476627 GATTTTTACTAAAAA AAAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTCG TTTTTACACTATTGT TERM 2978 2476625 - 2476658 + r 85 -12.4 -3.39449 | opp_overlap 2476627, overlap 2476624 2476627 ATTTTTACTAAAAAA AAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTC GTTTTTACACTATTG TERM 2979 2476627 - 2476656 + r 100 -15 -3.25567 | opp_overlap 2476627, overlap 2476625 2476624 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTACACTAT TERM 2980 2476656 - 2476627 - R 100 -15 -5.86061 | opp_overlap 2476627 2476625 2476624 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTACACTAT lrhA 2477639 - 2476701 - | LysR family NADH dehydrogenase transcriptional regulator TERM 2981 2477389 - 2477363 - G 72 -11.1 -3.12482 | opp_overlap 2477354, overlap 2477367 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGTATTTTCC TERM 2982 2478559 - 2478543 - H 76 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC TERM 2983 2478793 - 2478771 - g 70 -10.6 -2.75963 | overlap 2478770 ATTGCGATTCCAAAG GGCTTTACTC CGC GCGTAAAGCC ATCATGCAGCACTAC SSON_2347 2478554 - 2479771 + | aminotransferase AlaT TERM 2984 2480160 - 2480150 - g 77 -3.2 -5.09225 | AGGCTATTGAAAAAA TCGC TCA GCAA AAACTGGTCAATATG TERM 2985 2480363 - 2480336 - g 70 -4.8 -4.56597 | gap 1, overlap 2480338 2480351 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG TCGCAGCCAGGAGAT TERM 2986 2480383 - 2480397 + G 72 -7.2 -4.1673 | AGCCAGGAGATGGAC TACTTC ATG GAAGTA TTTGTTCCCAGCTTC SSON_2348 2479855 - 2480454 + | hypothetical protein TERM 2987 2480462 - 2480509 + T 81 -12.8 -3.28712 | gap 1, opp_overlap 2480487 CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA yfbS 2482345 - 2480513 - | putative transport protein TERM 2988 2482412 - 2482395 - R 100 -9.8 -5.24129 | TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG SSON_2351 2483585 - 2483091 - | hypothetical protein TERM 2989 2483642 - 2483624 - R 89 -6 -5.76949 | opp_overlap 2483624 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 2990 2483624 - 2483642 + r 74 -6 -4.55689 | opp_overlap 2483624 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT SSON_2352 2484123 - 2483668 - | hypothetical protein ackA 2484461 - 2485663 + | acetate kinase TERM 2991 2485667 - 2485694 + F 100 -16.4 -4.36914 | gap 1, overlap 2485669 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 2992 2485669 - 2485691 + F 100 -19.2 -2.8733 | overlap 2485667 GACTGCCTGATTTCA CACCGCCAGC TCA GCTGGCGGTG CTGTTTTGTAACCCG TERM 2993 2486709 - 2486724 + G 78 -9 -3.96148 | overlap 2486713 CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2485738 - 2487882 + | phosphate acetyltransferase TERM 2994 2487894 - 2487914 + F 79 -12.6 -2.87132 | GTAACCTCGTCATCA TCCGCAGC TTTGC GCTGCGGA TATCTGAACCGGAAA TERM 2995 2487923 - 2487945 + F 100 -10.7 -5.64304 | CTGCGGATATCTGAA CCGGAAATA ATCAC TATTTCCGG TTTTTTATTCTCTTA TERM 2996 2488895 - 2488914 + G 74 -8.6 -3.87149 | overlap 2488867 TTCGTGAAAAGCAGG CGGATGTT GAAC AACGTCCG TTTACCTTTGGTGAC yfcC 2488072 - 2489592 + | hypothetical protein TERM 2997 2489602 - 2489619 + T 100 -12.7 -5.32944 | opp_overlap 2489597 2489604 CACTAAAAATGTTAA GAGCCGC AATT GCGGCTC TTTTTTCATTCTGCC TERM 2998 2489617 - 2489604 - T 71 -9.5 -3.17553 | opp_overlap 2489602, overlap 2489597 CTAAAAATGTTAAGA GCCGC AATT GCGGC TCTTTTTTCATTCTG SSON_2356 2490167 - 2489625 - | putative regulator TERM 2999 2489713 - 2489731 + g 82 -9.6 -4.16016 | opp_overlap 2489712 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA yfcE 2490779 - 2490225 - | phosphodiesterase yfcF 2491476 - 2490832 - | hypothetical protein TERM 3000 2491168 - 2491183 + g 86 -9 -4.42386 | CCAGGCCTGAATCCG TCGTGC ACGC GCACGA TTTTCTAAATCAAGC TERM 3001 2491879 - 2491859 - g 70 -5.4 -4.42653 | overlap 2491862 ATCTGACTGAGAAAA CAGGACTC TTTTT GAGTCATG AAACGCGTGAGCGCG yfcG 2491612 - 2492259 + | putative S-transferase folX 2492316 - 2492678 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 3002 2493156 - 2493116 - g 93 -12.6 -3.93583 | gap 1, overlap 2493101 GAATTTACTCATAAA CTCTGCGCCC-GCTGGGAA GAGA TTGCCTGCCGGGCGCAAAG TGACAAAACGCGAGT SSON_2361 2492699 - 2493592 + | putative sugar nucleotide epimerase SSON_2362 2494989 - 2494486 - | IS1 ORF TERM 3003 2495283 - 2495271 - R 72 -9.1 -3.51168 | overlap 2495269 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 3004 2495498 - 2495472 - R 74 -7.3 -4.25848 | gap 1, overlap 2495474 AATTCCCCATGAAAA TACTCCGGCAGC GTTA GCCACCGGAG-A GGAAATTATTTCAGC TERM 3005 2495497 - 2495474 - R 93 -12.4 -3.73042 | overlap 2495472 TTCCCCATGAAAATA CTCCGGCAGC GTTA GCCACCGGAG AGGAAATTATTTCAG hisP 2496277 - 2495504 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2497001 - 2496285 - | histidine transport, membrane protein M TERM 3006 2496310 - 2496323 + g 72 -4.5 -4.64766 | opp_overlap 2496301, overlap 2496311 GAAGAAGGTTTCACA TGCTG CAAC CAGCG TTTTTCCGCTCTGCG hisQ 2497684 - 2496998 - | histidine transport system permease protein TERM 3007 2497720 - 2497754 + r 70 -4.9 -4.42062 | gap 1, overlap 2497721 TGGTGAATTACCGCC TCTTGTCTCCCTCCGG TTAC CCGAAGGGAG-CGGGC TTTCTTTCACCGATG hisJ 2498556 - 2497774 - | histidine-binding periplasmic protein of high-affinity histidine transport system TERM 3008 2498416 - 2498428 + g 84 -4.1 -5.27477 | ATCGAAGCCAACCAG TTCGC CTT GTGAA TTTTTTGATTCAAAT argT 2499559 - 2498777 - | lysine-, arginine-, ornithine-binding periplasmic protein TERM 3009 2498903 - 2498926 + g 100 -5.2 -5.63645 | ATCTTTACGTAGCCC TACACCGGTG CCAT CACCGAAGTA TTTTTTGTCTTTTAC TERM 3010 2499816 - 2499798 - R 95 -13.2 -4.07687 | overlap 2499809 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG ubiX 2500394 - 2499825 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3011 2500476 - 2500458 - R 78 -12.4 -2.53263 | GGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TCAGCGAAGGCATCA purF 2502006 - 2500489 - | amidophosphoribosyltransferase TERM 3012 2500908 - 2500921 + g 73 -3.7 -4.82901 | GGACGATGGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 3013 2501777 - 2501743 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TAGGGTAACGCACAT cvpA 2502531 - 2502043 - | colicin V production protein TERM 3014 2502659 - 2502634 - R 100 -9.8 -5.14163 | ACGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC dedD 2503452 - 2502790 - | hypothetical protein folC 2504710 - 2503442 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3015 2504686 - 2504662 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 3016 2504769 - 2504747 - R 100 -17 -4.46656 | opp_overlap 2504747 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 3017 2504747 - 2504769 + r 93 -14.8 -3.45054 | opp_overlap 2504747 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2505694 - 2504780 - | acetyl-CoA carboxylase subunit beta TERM 3018 2505716 - 2505730 + r 71 -3.5 -4.78848 | CCTTTCTGTCTGAAC CTGGT TCGAT GCCAG TTTTATCTTTGGGGA TERM 3019 2505838 - 2505826 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC GGAGTTACTTTTTAT dedA 2506509 - 2505850 - | hypothetical protein TERM 3020 2506526 - 2506582 + r 80 -9.5 -3.90241 | overlap 2506537 2506577 TTTGCCTATGCCTTG TACTCGTCATCTTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAATGTTCCGAGCA TTATTCTCGTTAGTC TERM 3021 2506537 - 2506571 + r 93 -15.2 -3.03338 | overlap 2506526 CTTGTACTCGTCATC TTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCATTAT truA 2507404 - 2506592 - | tRNA pseudouridine synthase A TERM 3022 2507156 - 2507181 + g 72 -8.1 -3.92542 | ATTTACGCCCAAGGT CCACGCCGCGT CTTT GCGCTGCGCGG TTGTTTCGAAATGCA usg 2508417 - 2507404 - | putative semialdehyde dehydrogenase TERM 3023 2508470 - 2508443 - R 73 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATGTTA CAGCAGAGAGC ATGAAGAAGAGATTA pdxB 2509619 - 2508483 - | erythronate-4-phosphate dehyrogenase div 2509718 - 2510713 + | flagella biosynthesis regulator SSON_2380 2511888 - 2510710 - | hypothetical protein TERM 3024 2511835 - 2511819 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGCGA TGCGG AAGAGCGAAAAATTG TERM 3025 2512049 - 2512080 + r 81 -12.4 -3.14132 | opp_overlap 2512056, overlap 2512056 CGATTGTCAATGATG TGAAAAAGGGAACC ATCA GGTTCCCTTTTGCG TTAGTGCCGGAGGCC TERM 3026 2512056 - 2512073 + r 91 -11.3 -4.30014 | opp_overlap 2512056, overlap 2512049 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC TERM 3027 2512073 - 2512056 - R 95 -11.3 -4.64598 | opp_overlap 2512049 2512056 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC fabB 2513383 - 2512163 - | 3-oxoacyl-(acyl carrier protein) synthase I mnmC 2513542 - 2515548 + | 5-methylaminomethyl-2-thiouridine methyltransferase SSON_2383 2515947 - 2515669 - | hypothetical protein SSON_2384 2516529 - 2515981 - | putative transporting ATPase yfcA 2517338 - 2516529 - | hypothetical protein TERM 3028 2516896 - 2516881 - G 75 -4.6 -4.84017 | AATCCGTCATAAAAA CCGACG CAGC CACCGG CAATTAACGCGAAGG mepA 2518162 - 2517338 - | penicillin-insensitive murein endopeptidase TERM 3029 2518068 - 2518083 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 3030 2518108 - 2518152 + g 80 -5.5 -4.95211 | GCCACGGCGTCGCTG CCAGGCTAGCGCTACTGGC AAGCAGA GCCAGCAGCGCAATCGCGG TTTTGTTCATTTTTT aroC 2519251 - 2518166 - | chorismate synthase TERM 3031 2518808 - 2518822 + g 77 -2.8 -5.03314 | opp_overlap 2518808, overlap 2518810 GATTTCAATACCAAA TTTCTC GGC GAGATA TTTTTTGGCAATCGC yfcB 2520551 - 2519286 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase SSON_2388 2520384 - 2520935 + | hypothetical protein yfcO 2521824 - 2521057 - | hypothetical protein TERM 3032 2521508 - 2521498 - G 78 -5.4 -4.75472 | TGTATAGGAATAAAA GGAT GCG ATCC AAGGGCAACCATAAT SSON_2391 2522440 - 2521916 - | putative minor fimbrial subunit SSON_2392 2522907 - 2522437 - | putative minor fimbrial subunit yfcS 2524071 - 2523427 - | putative chaperone yfcU 2526840 - 2524198 - | PapC-like porin protein TERM 3033 2525299 - 2525271 - G 70 -7.3 -4.05747 | opp_overlap 2525271 2525277, overlap 2525280 TATAGTTGAGATAAA CCGAAACACCCGC ATC GCGGAAGTTCTGG TTATAAGTGGCAGTG TERM 3034 2526071 - 2526081 + g 75 -6.8 -4.32034 | TAATCCTCGCCCAGC GCCA GTT TGGC TTTTAATGATGGTAA TERM 3035 2526612 - 2526624 + g 70 -4.7 -4.56702 | AAATATCGTACTCTT CCGCC AAT GGCTG TTTATTTAGTTGAAC TERM 3036 2526916 - 2526889 - R 93 -12 -3.71148 | opp_overlap 2526889, overlap 2526890 CAAAATCCATTTAAA TCCCCCATAGCA GTGT CGCTATGGGGGT ATGCCTTACAGGTAA TERM 3037 2526915 - 2526890 - R 93 -15.5 -2.81966 | opp_overlap 2526889, overlap 2526889 AAAATCCATTTAAAT CCCCCATAGCA GTGT CGCTATGGGGG TATGCCTTACAGGTA SSON_2395 2527485 - 2526922 - | putative fimbrial-like protein TERM 3038 2527270 - 2527285 + g 70 -4.6 -4.51654 | AATCTGGAAACTTTT CGGCGT GGTG GTGCCG TTATTTTTCAGTTTT TERM 3039 2527410 - 2527466 + g 77 -8.8 -4.09739 | overlap 2527398 TACCGTTGTTACCCG CAGCGATTGTTGCCGTAGAGGTGA ACACGCCCA TCACCATTGCCGCAGCAATAGCTG TTTTAACAAACTTAC TERM 3040 2528157 - 2528125 - R 90 -14.4 -3.21099 | opp_overlap 2528125 CTGCCTGATGAGCAA TTATGCCCAATGAA TCTAC CTCATTGGGCATAA TTTGGAACTCATCAG TERM 3041 2528125 - 2528157 + r 93 -13.7 -3.58343 | opp_overlap 2528125 CTGCCTGATGAGCAA TTATGCCCAATGA ATCTACC TCATTGGGCATAA TTTGGAACTCATCAG SSON_2396 2528654 - 2528169 - | phosphohistidine phosphatase fadJ 2531001 - 2528857 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3042 2529204 - 2529216 + g 88 -2.6 -5.46698 | TGAGCGGGTAAATGG CGGG ATCGA CCTG TTTTTTGCTTTTACG TERM 3043 2529550 - 2529562 + g 70 -6.9 -4.13963 | opp_overlap 2529550 2529549, overlap 2529539 GTCACGCACGACAAT GGGCG TTT TGCCC TGTTTTTTCGCCAGT fadI 2532311 - 2531001 - | 3-ketoacyl-CoA thiolase TERM 3044 2532357 - 2532368 + r 82 -3 -5.58209 | GGTCTGACCTGATCA TAGT CTTA ACTA TTTTTTTACATTTAG TERM 3045 2532473 - 2532447 - R 100 -20.2 -5.3689 | AGAAAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG AACGTACCCGAGAGG SSON_2399 2532799 - 2532491 - | hypothetical protein fadL 2533141 - 2534487 + | long-chain fatty acid outer membrane transporter TERM 3046 2534529 - 2534509 - f 100 -15.5 -3.85698 | opp_overlap 2534509 GTTCGCCTGGATAAA GTCACCTGC ATA GCAGGTGAC TTTAACTCCCCCACT TERM 3047 2534509 - 2534529 + F 100 -15.5 -3.64822 | opp_overlap 2534509 GTTCGCCTGGATAAA GTCACCTGC ATA GCAGGTGAC TTTAACTCCCCCACT TERM 3048 2535116 - 2535091 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 2535099, overlap 2535092 2535106 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 3049 2536096 - 2536124 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SSON_2401 2534953 - 2536149 + | ISSfl2 ORF SSON_2402 2536780 - 2536277 - | IS1 ORF TERM 3050 2538088 - 2538078 - R 74 -6.8 -4.24338 | AAAAAGACTTCAAAA TCGC CAG GCGA AATATCAAAATGAAA TERM 3051 2538323 - 2538284 - R 77 -10.3 -3.3785 | opp_overlap 2538294 2538322, overlap 2538294 GTAATTGAGGGATAA CAACAAAAAAGGTGAGT TTTGCG ACTCACCTTTTTTATTT GTTTCTTATTCAGAA TERM 3052 2538313 - 2538294 - R 100 -7.9 -5.68489 | opp_overlap 2538294, overlap 2538284 GATAACAACAAAAAA GGTGAGT TTTGCG ACTCACC TTTTTTATTTGTTTC TERM 3053 2538294 - 2538313 + r 100 -8.6 -5.85425 | opp_overlap 2538294 2538284 GATAACAACAAAAAA GGTGAGTT TTGC GACTCACC TTTTTTATTTGTTTC vacJ 2539084 - 2538329 - | lipoprotein precursor yfdC 2539378 - 2540310 + | putative transport TERM 3054 2540318 - 2540301 - f 77 -3.3 -5.1286 | GAAAAATGATAAAAA CCCGGCA TAAA TGGCGAG GGTTTAAGCAATCGA TERM 3055 2540608 - 2540586 - f 93 -10 -4.60487 | CATGACGGGTAAAAA GTGGATAAAA TAA TTTTACCCAC CGGATTTTTACCCAT intC 2540622 - 2541779 + | putative prophage Sf6-like integrase SSON_2407 2542088 - 2542441 + | IS2 ORF2 SSON_2408 2543759 - 2543256 - | IS1 ORF TERM 3056 2544316 - 2544300 - R 72 -8.1 -3.78529 | opp_overlap 2544293, overlap 2544298 ATAACCACCAAAACA TTTGCTT TGC AAGCAAA AACAGTGACCATTGA TERM 3057 2544446 - 2544468 + r 73 -7.8 -4.08485 | opp_overlap 2544448, overlap 2544461 TTATTGCATTTATAT TATTTGAGCT TTT AGCTCAAAAA TTTGGTTTGAGTACA TERM 3058 2544466 - 2544448 - R 71 -10.4 -2.64735 | opp_overlap 2544446 2544461 ATTGCATTTATATTA TTTGAGCT TTT AGCTCAAA AATTTGGTTTGAGTA TERM 3059 2544641 - 2544665 + r 100 -13.7 -5.66229 | TGTACGTTTATGTAC TCGCCATGAAG CTC TTTCATGGCGA TTTTTTATTCTTAAT TERM 3060 2544922 - 2544938 + r 83 -2.1 -5.80003 | overlap 2544924 2544925 CTATATGCTCACTGG CTACCTG CAT CAGGCTG TTTTTTGTTTCTTCC SSON_2410 2548363 - 2545274 - | phage protein-related TERM 3061 2547208 - 2547228 + g 72 -4.5 -4.63542 | overlap 2547186 2547209 ATGACGCCGCCGAAC TGGCGGACG ATG CGGCAGCCG TTTTTGAGGATTCTG TERM 3062 2547517 - 2547531 + g 74 -7.8 -4.09739 | TTTCAGAAGACCTGG CGTTCG TCT CGGACG TTTTGGCCGCCTTCG TERM 3063 2548394 - 2548375 - R 100 -12.1 -5.26316 | opp_overlap 2548375 TCACCCCACAAAAAA GCCCGCC TGAACC GGCGGGC TGTCATAACACTGTG TERM 3064 2548375 - 2548394 + r 77 -12.1 -2.79501 | opp_overlap 2548375 TCACCCCACAAAAAA GCCCGCC TGAACC GGCGGGC TGTCATAACACTGTG SSON_2411 2548938 - 2548456 - | putative outer membrane protein TERM 3065 2548968 - 2548987 + r 76 -7.8 -4.21989 | opp_overlap 2548969, overlap 2548969 TTTCTGCAATAAAAA AGGCGTCA TTCC TGACGCCA TTTATTGGGGTTATA TERM 3066 2548986 - 2548969 - R 100 -11.3 -5.4505 | opp_overlap 2548968 2548969 TTCTGCAATAAAAAA GGCGTCA TTCC TGACGCC ATTTATTGGGGTTAT TERM 3067 2548969 - 2548986 + r 77 -11.3 -3.1247 | opp_overlap 2548969, overlap 2548968 TTCTGCAATAAAAAA GGCGTCA TTCC TGACGCC ATTTATTGGGGTTAT TERM 3068 2549025 - 2549035 + r 73 -2.4 -5.14965 | CAACGAATACTGATG CCGG AAG CCGC TTTTTTGGTCACAAT SSON_2412 2552506 - 2549009 - | putative host specificity protein TERM 3069 2549900 - 2549911 + g 74 -5.8 -4.45068 | CTGAATTGCCGCACT CTGG TCTT CCAG TTTCTTATTGACGGT TERM 3070 2550073 - 2550060 - G 79 -4.5 -5.00616 | TCGCCTTTGAAAAAA TCCAG ATAA CCGGA TGCATCATCACTCGG TERM 3071 2550310 - 2550298 - G 78 -9.1 -3.96148 | opp_overlap 2550308 CCGTCGGATCATAAA CCGCA AGA TGCGG CGTGGCGGTTATCTG TERM 3072 2550745 - 2550770 + g 72 -9.7 -3.30441 | GCACATGCTGCACGG CGGTGATGGCA TACG TGCCGTCGTCG TTCTCACGGATACTC TERM 3073 2552356 - 2552376 + g 90 -7.5 -4.7497 | CACTGTCCAGCACCG GCGTACTGT TCA GCAGCACGC TTTTTAATCCATCCA TERM 3074 2552545 - 2552532 - R 74 -5.9 -4.64846 | opp_overlap 2552532 2552533, overlap 2552527 2552533 CCATAAACGATAAAA CCGCC CGGA GGCGA TTTCACATAAAACAT SSON_2413 2553199 - 2552567 - | putative tail component of prophage TERM 3075 2552846 - 2552827 - GR 81 -9.3 -4.05861 | CGAGAGAAAACAGAA TGCCGGT CATACC ACCGGCA CCAATGGCAGCCCCC SSON_2414 2553879 - 2553136 - | tail assembly protein TERM 3076 2553374 - 2553344 - GR 82 -7.4 -4.45945 | overlap 2553349 2553351 ACCGATGAACCAAAA CAGCACAGCAGCAC ATC GCCCGGCTGCGCCG CTGACAACGGCACCT TERM 3077 2553853 - 2553869 + gr 70 -9.5 -3.02649 | overlap 2553855 TCGCCGGGCGTGCGC CAGAATC GCT GATTCTG TCTCTGTCATGGGAT SSON_2415 2554583 - 2553885 - | putative minor tail protein TERM 3078 2554272 - 2554252 - G 90 -9.7 -4.42653 | overlap 2554254 ACCGCATCCAGAAAA CGGGCGTAA ACC TTACGCCGG ACCACCGTTCCGCCG TERM 3079 2554434 - 2554448 + g 80 -5.7 -4.94972 | CTGTCGCCCCTGCCA GGTGA CCGGC TCACC TTTTTCGTTCTGCTC SSON_2416 2554912 - 2554583 - | putative minor tail protein TERM 3080 2554891 - 2554905 + g 72 -6.4 -4.30576 | CCATACCGGGTTTCA CTTTCC AGC GGAAGG TTTTCATCGTCCACC SSON_2417 2557470 - 2554909 - | putative tail length tape measure protein TERM 3081 2556097 - 2556112 + g 81 -6.8 -4.60041 | CGCATACACCTTCAC GCCGGA CTGT TTCGGC TTTTTCAGCGTCGCT TERM 3082 2556371 - 2556381 + g 100 -4.6 -5.76949 | overlap 2556369 TTTTGGGCTGCATCC CGCT CCA GGCG TTTTTTTTCACGATC TERM 3083 2557327 - 2557352 + g 91 -5.3 -5.44119 | overlap 2557320 CAGCGCCTGTCGGCT CAGCGACTGTT CAAC GACTGCCGCTG TTTTTTTCGCATCAC SSON_2418 2557897 - 2557463 - | putative tail component of prophage TERM 3084 2557733 - 2557706 - G 90 -9.2 -4.58395 | gap 1 CGGATCGCTGAAAAA CAGGCTGA-GCAC GGT GTACGTCAGCCCG GAAAAGTGCATATCC TERM 3085 2557863 - 2557828 - G 81 -13.2 -2.71483 | opp_overlap 2557827 2557828, overlap 2557816 ACATCCCGGCAAGCA TGGCGCGCCAGTCGGG TCGC CCCATCTCACGCGCCA GTTTCAGGGCAAAAC SSON_2419 2558301 - 2557879 - | putative tail component of prophage SSON_2420 2559057 - 2558317 - | putative tail component of prophage TERM 3086 2558408 - 2558445 + g 79 -2.6 -5.18371 | opp_overlap 2558403, overlap 2558409 2558410 CCTGCAGCAACACCT TTCACGGTGATGGTCA TACCAC TGACCGACACGGTGGC TTTTGTTTTATCCGC SSON_2421 2559460 - 2559065 - | putative tail component of prophage TERM 3087 2559351 - 2559340 - G 70 -7.2 -4.03234 | CGCCGGTGAGATAAA CGGC AATT GCCG GAAAATCTTCCTCAT TERM 3088 2559407 - 2559373 - G 100 -10.7 -4.72272 | gap 1, opp_overlap 2559375, overlap 2559376 CTTCCTCATCAAAAA CAGCGGGGCGAC-CAT CAAA AAGCGTCGCCCCGGTG TCATGCTTCTCCAGT TERM 3089 2559404 - 2559376 - G 72 -11 -2.98472 | gap 1, opp_overlap 2559375, overlap 2559373 CCTCATCAAAAACAG CGGGGCGAC-CAT CAAA AAGCGTCGCCCCG GTGTCATGCTTCTCC SSON_2422 2560035 - 2559457 - | putative tail component of prophage TERM 3090 2559960 - 2559980 + g 78 -8.1 -4.30576 | overlap 2559959 2559973 GGTTAATGGCCATTG CGGCGGCAC CGG GCACCGCCG TTTTGCTGATACGGC SSON_2423 2560400 - 2560047 - | putative head-tail joining protein of prophage SSON_2424 2560810 - 2560412 - | putative DNA-packaging protein TERM 3091 2560848 - 2560833 - R 93 -10.4 -4.64844 | opp_overlap 2560833 TCCACAGAGAGAAAA TGGCCC CGAA GGGCCA TGATTACGCCAGTTG TERM 3092 2560833 - 2560848 + r 71 -10.4 -2.71681 | opp_overlap 2560833 TCCACAGAGAGAAAA TGGCCC CGAA GGGCCA TGATTACGCCAGTTG SSON_2425 2561877 - 2560852 - | putative major capsid protein TERM 3093 2561911 - 2561898 - R 85 -5.9 -5.41746 | opp_overlap 2561898 AATCCCGTAAAAAAA GCCAC ACAG GCGGC CTTTAGTGATGAAGG SSON_2426 2562265 - 2561933 - | putative head decoration protein SSON_2427 2563555 - 2562275 - | putative minor capsid protein precursor TERM 3094 2563525 - 2563510 - G 100 -7.5 -5.18371 | GCGCACAAAAGAAAA CCCGC GCATAG GCGGG TTCAAGCATCAGCGG TERM 3095 2563561 - 2563551 - G 72 -6.8 -4.25283 | AGCGGCTCATTAAAA GCCA TGC TGGC AATATGCGGGAGATT SSON_2428 2565176 - 2563575 - | putative capsid structural protein of prophage TERM 3096 2563643 - 2563658 + g 82 -11.8 -3.53444 | opp_overlap 2563636 ATTCAAATGCCGCAG CCGCCC AGGC GGGCGG TTTAAGACCAGCTGC TERM 3097 2564602 - 2564629 + g 74 -9.8 -3.42069 | gap 1, overlap 2564600 2564606 TCATTAATCTGCACA CCGGC-ACGGCAG TTC CGGCTGTCGCCGG TATTGTTCGGGTTGC SSON_2429 2565379 - 2565173 - | putative head-tail joining protein of prophage TERM 3098 2565399 - 2565419 + r 76 -4.6 -4.95167 | CCTCTCCGGATAAGG CACGGGCG TAATC TGCCAGTG TTTTCTTGTTGGTTG SSON_2430 2567301 - 2565376 - | putative DNA packaging protein of prophage TERM 3099 2565540 - 2565556 + gr 73 -3.5 -4.8048 | opp_overlap 2565528, overlap 2565528 AAACGAAGCAGTCGA GCGCCTC ATT GCGTCGC TTTTTGCTGTCCCAC TERM 3100 2565561 - 2565575 + gr 100 -5 -5.52986 | overlap 2565563 CATTGCGTCGCTTTT TGCTGT CCC ACAGTA TTTTTTTCCTGCCAT TERM 3101 2565563 - 2565573 + gr 72 -5.4 -4.40552 | overlap 2565561 TTGCGTCGCTTTTTG CTGT CCC ACAG TATTTTTTTCCTGCC TERM 3102 2565739 - 2565775 + gr 95 -5.8 -5.33026 | gap 1, overlap 2565741 ATAAATCTGCTCTTT CGCGGTAT-CCGTACCG ATTT CGGTAAGGTAAACCCCG TTTTTGTTTCGCTTA TERM 3103 2566516 - 2566492 - GR 70 -4.1 -4.60797 | opp_overlap 2566491 2566494 2566513, overlap 2566494 CTCGCAGAGATAAAA CACGCTGGAGG GGT CATCCGGCGTC CATTTGAGGCCAAAC TERM 3104 2566610 - 2566598 - GR 79 -7.7 -4.43681 | CAGGCAACATGAAAA CGCAT AAA ATGCG GGGATTCACTGGCTG TERM 3105 2566871 - 2566856 - GR 70 -4 -4.63527 | gap 1, opp_overlap 2566856 CGACCATTGGAAAAA CGCTTCA TAG TGA-GCG TGTTATCCCGGTGCT nohB 2567821 - 2567276 - | bacteriophage DNA packaging protein TERM 3106 2567903 - 2567845 - H 100 -18.5 -4.06182 | opp_overlap 2567847 2567851, overlap 2567847 2567851 CCACGGACAAAAACA GAGAAAGGAAACGACAGAGGCCAAAAA GCCCG TTTTCAGCACCTGTCGTTTCCTTTCTT TTCAGGGGGTGTTTT TERM 3107 2567847 - 2567901 + H 100 -14.5 -4.09511 | opp_overlap 2567847 2567845 2567851, overlap 2567851 ACGGACAAAAACAGA GAAAGGAAACGACAGAGGCCAAAAA GCCCG TTTTCAGCACCTGTCGTTTCCTTTC TTTTCAGGGGGTGTT TERM 3108 2567901 - 2567847 - H 100 -21.1 -3.61603 | opp_overlap 2567847 2567851, overlap 2567845 2567851 ACGGACAAAAACAGA GAAAGGAAACGACAGAGGCCAAAAA GCCCG TTTTCAGCACCTGTCGTTTCCTTTC TTTTCAGGGGGTGTT TERM 3109 2567897 - 2567851 - H 100 -16.1 -4.40232 | opp_overlap 2567847 2567851, overlap 2567847 2567845 ACAAAAACAGAGAAA GGAAACGACAGAGGCCAAAAA GCCCG TTTTCAGCACCTGTCGTTTCC TTTCTTTTCAGGGGG TERM 3110 2567851 - 2567897 + H 93 -9.5 -4.64861 | opp_overlap 2567851 2567847 2567845, overlap 2567847 ACAAAAACAGAGAAA GGAAACGACAGAGGCCAAAAA GCCCG TTTTCAGCACCTGTCGTTTCC TTTCTTTTCAGGGGG TERM 3111 2568848 - 2568835 - g 83 -5.3 -5.13722 | opp_overlap 2568835 TCCACGAAAACAAAA GGTAT TACT ATACC TTTGATAATTCATTA ydfO 2568486 - 2568911 + | hypothetical protein TERM 3112 2568985 - 2568996 + T 70 -2.2 -4.99435 | overlap 2568970 TGTACCCGGTAACCC CGGT GTGC ATCG TTTTTGATTATTCCC SSON_2433 2569996 - 2569091 - | insertion element IS2 transposase InsD SSON_2434 2570319 - 2569954 - | insertion sequence 2 OrfA protein SSON_2435 2571093 - 2570836 - | putative bacteriophage protein TERM 3113 2571410 - 2571423 + r 71 -3.8 -4.84359 | opp_overlap 2571410 CGCGCTCAGTAAAAA CCAC AGATTC GTGG TTTTTCTCCAGCTCG TERM 3114 2571728 - 2571709 - R 70 -2.1 -5.00616 | opp_overlap 2571712 2571716, overlap 2571711 GTTCGGTGTAAAAAA CATGCGT TGCGGT ACGCATT TATTGCAAAAAGCCC TERM 3115 2571716 - 2571726 + r 71 -6.8 -4.15044 | opp_overlap 2571711 2571709, overlap 2571712 GTAAAAAACATGCGT TGCG GTA CGCA TTTATTGCAAAAAGC TERM 3116 2571756 - 2571740 - R 95 -11.5 -4.62783 | opp_overlap 2571737 2571740 2571748 CATTTATTGCAAAAA GCCCCGC ATC GCGAGGC TCATTAAATGGACTT SSON_2436 2572247 - 2571789 - | putative endopeptidase SSON_2437 2572741 - 2572244 - | putative lysozyme ybcR 2572956 - 2572741 - | hypothetical protein TERM 3117 2572898 - 2572888 - G 72 -4.6 -4.60487 | overlap 2572889 2572891 TAGCAGCTGTAAAAA CCAG TAC CCGG CACTACCTGCTGAGG TERM 3118 2573098 - 2573083 - H 88 -7.5 -4.95854 | opp_overlap 2573083 CAAAAAATGGAAAAA CCCGC TCGACG GCGGG TTTAAGCTGTGTGAC SSON_2439 2573396 - 2573899 + | IS1 ORF TERM 3119 2573901 - 2573918 + F 79 -4.1 -5.09895 | opp_overlap 2573901 2573900 AACACTATCAATAAG TTGGAGT CATT ACCCCAA TTTTTTACGTACGTA nmpC 2574305 - 2575387 + | outer membrane porin protein C precursor TERM 3120 2575437 - 2575402 - T 100 -14.2 -4.30844 | gap 1, overlap 2575404 ATTTGATTACTAAAA GATATGTTGCGGGAGGC TTT GCCTCCC-CAACATATA AGTGGCTCCCTCAAG TERM 3121 2575435 - 2575404 - T 100 -16.8 -3.7574 | gap 1, overlap 2575402 TTGATTACTAAAAGA TATGTTGCGGGAGGC TTT GCCTCCC-CAACATA TAAGTGGCTCCCTCA TERM 3122 2575524 - 2575543 + T 93 -9.2 -4.88129 | overlap 2575525 TTACCCTTTATTTTT GGGGGCGT TGCA ACGCCCCA TTTTTAATAATTTTT TERM 3123 2575525 - 2575542 + T 88 -12.7 -3.50437 | overlap 2575524 TACCCTTTATTTTTG GGGGCGT TGCA ACGCCCC ATTTTTAATAATTTT ybcQ 2575959 - 2575576 - | hypothetical protein SSON_2442 2576182 - 2576045 - | hypothetical protein rus 2576544 - 2576182 - | endodeoxyribonuclease RUS ybcO 2576831 - 2576541 - | hypothetical protein ninE 2576994 - 2576824 - | prophage protein NinE ybcN 2577449 - 2576994 - | hypothetical protein TERM 3124 2577511 - 2577486 - H 75 -6.1 -4.49337 | opp_overlap 2577493, overlap 2577477 GCAGAATGCAGAAAA TCGCAGGTGCA TTTC TGCATCTGTGA CAAGGTGATGAGTTC TERM 3125 2579797 - 2579777 - g 77 -9.7 -3.59979 | overlap 2579781 2579791 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 3126 2579793 - 2579781 - g 75 -6.9 -4.44046 | overlap 2579777 2579791 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_2447 2578955 - 2580115 + | IS21 ORF1 SSON_2448 2580128 - 2580925 + | IS21 ORF2 SSON_2449 2581007 - 2581510 + | IS1 ORF TERM 3127 2582820 - 2582841 + G 70 -3.7 -4.72497 | ATTTCGGGTATTGTC TGCCTAATG TTGC TATTTGGCA TTTTCTTCCTGAGTA lacY 2581659 - 2582906 + | galactoside permease TERM 3128 2583701 - 2583686 - T 87 -6.8 -5.11063 | ATCAGGCAATAAAAA GCCGCA TTGA TGCAGC AATGGTAGGTCTGGA TERM 3129 2584138 - 2584125 - T 100 -8.1 -5.18371 | CTCCATAAAACAAAA CTCGC CGTA GCGAG CTCAGATAAAAGAAA TERM 3130 2584171 - 2584154 - T 76 -4.8 -4.83243 | opp_overlap 2584154 CTCAGATAAAAGAAA TCCCCG TCAGTG CGAGGA TGCTGTTCATTGCTG SSON_2451 2585613 - 2585110 - | IS1 ORF SSON_2452 2587001 - 2586162 - | IS911 ORF2 TERM 3131 2586922 - 2586942 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 3132 2587886 - 2587861 - H 72 -9.1 -3.61398 | opp_overlap 2587861 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 3133 2587861 - 2587886 + H 100 -9.8 -5.61596 | opp_overlap 2587861 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_2453 2587876 - 2589222 + | IS4 orf TERM 3134 2589233 - 2589204 - f 89 -9.3 -4.59109 | opp_overlap 2589198 2589205 2589206, overlap 2589206 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TAATACTTTGGCTGA TERM 3135 2589205 - 2589232 + F 85 -12.8 -3.33483 | opp_overlap 2589204 2589206, overlap 2589198 2589206 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTAATACTTTGGCTG TERM 3136 2589206 - 2589231 + F 90 -16.3 -2.59608 | opp_overlap 2589204 2589206, overlap 2589205 2589198 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAATACTTTGGCT TERM 3137 2589231 - 2589206 - f 100 -16.3 -3.90762 | opp_overlap 2589206 2589205 2589198, overlap 2589204 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAATACTTTGGCT SSON_2454 2589467 - 2590900 + | sucrose hydrolase SSON_2455 2591861 - 2590908 - | sucrose operon repressor SSON_2456 2592134 - 2592352 + | D-serine permease dsdA 2592370 - 2593698 + | D-serine dehydratase emrY 2595344 - 2593806 - | multidrug resistance protein Y TERM 3138 2594915 - 2594926 + g 79 -2.2 -5.24531 | opp_overlap 2594911 TTGACCATAATGCCA GAGC AAAT GTTC TTTTTTCTGGCGGAT emrK 2596507 - 2595344 - | multidrug resistance protein K TERM 3139 2595999 - 2596015 + g 81 -10.1 -3.89131 | TTATAAGCCTGGATA GCGGCAT TCA GTGCCGC TTTGCTACTTATTAA TERM 3140 2596129 - 2596156 + g 83 -10 -4.1337 | gap 1, opp_overlap 2596129, overlap 2596132 ATTGTTGATACTGAA TAC-GTGCTGAAG CGA CTTCGGCACTGTA TTGTTTATCCTGTAA TERM 3141 2596132 - 2596152 + g 80 -11.9 -3.39301 | opp_overlap 2596129, overlap 2596129 GTTGATACTGAATAC GTGCTGAAG CGA CTTCGGCAC TGTATTGTTTATCCT evgA 2596923 - 2597537 + | DNA-binding transcriptional activator EvgA TERM 3142 2598779 - 2598760 - g 100 -4.3 -5.66989 | opp_overlap 2598760 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC ATATTATTATGAGCT TERM 3143 2599673 - 2599654 - g 70 -3.6 -4.65722 | gap 1, overlap 2599662 GTAGAGAGAAATAAA GCGATCAAT GCA ACTG-TCGC AAAAAGTCAGTTTCT evgS 2597542 - 2601135 + | hybrid sensory histidine kinase in two-component regulatory system with EvgA TERM 3144 2601142 - 2601168 + T 82 -11.6 -3.34517 | opp_overlap 2601139 2601140, overlap 2601140 AATGACTAAATAGCG GCTCCCACAATG TTC TAATGTGGGAGC TATTTACCAGCACAT yfdE 2602375 - 2601191 - | hypothetical protein TERM 3145 2601264 - 2601279 + g 75 -4.6 -4.87786 | opp_overlap 2601258, overlap 2601235 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 3146 2602381 - 2602357 - G 83 -6.5 -5.0133 | gap 1, opp_overlap 2602356 2602357 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA SSON_2463 2603354 - 2602410 - | putative transporter YfdV SSON_2464 2605118 - 2603424 - | putative oxalyl-CoA decarboxylase TERM 3147 2604015 - 2604032 + g 73 -3.5 -4.79667 | AAAGTAATTTAATGG TTGAGTA TCTG TACTTAA TTTTTCATGCATTTT TERM 3148 2604447 - 2604420 - G 76 -7.9 -4.1711 | gap 1, opp_overlap 2604428 AGCACTTTCAATAAA TTCACGAAGCTG TTCAT CAGCTT-GTGAA TACGCCGCGCCTTTG TERM 3149 2604940 - 2604925 - G 77 -6.1 -4.63218 | overlap 2604926 2604927 TTTTGGGTAAGAAAA CCGCT TGCCGC AGCGG CATAGCCTGCCGACT SSON_2465 2606422 - 2605172 - | formyl-coenzyme A transferase TERM 3150 2606264 - 2606316 + g 70 -6.2 -4.26903 | opp_overlap 2606269 2606271, overlap 2606265 2606269 AAGCGCATCGATATC AGGAATATCTCGCAGTTGGTGACG CGTTA CGTCACCAACGCCGGGACGTTCAA TTTTAATAACGTCAG TERM 3151 2606265 - 2606315 + g 70 -9.7 -3.1582 | opp_overlap 2606269 2606271, overlap 2606264 2606269 AGCGCATCGATATCA GGAATATCTCGCAGTTGGTGACG CGTTA CGTCACCAACGCCGGGACGTTCA ATTTTAATAACGTCA TERM 3152 2606309 - 2606271 - G 81 -12.4 -3.18849 | opp_overlap 2606269 2606265 2606264, overlap 2606269 TCGATATCAGGAATA TCTCGCAGTTGGTGACGC GTT ACGTCACCAACGCCGGGA CGTTCAATTTTAATA TERM 3153 2606880 - 2606844 - R 95 -11.9 -3.92542 | opp_overlap 2606843 2606842 GCGAGCGCCAAATAA TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA AATTGTCGGCTGGAG SSON_2466 2607558 - 2606935 - | hypothetical protein TERM 3154 2607986 - 2607976 - g 83 -5.4 -5.15381 | AAGAGACTGAAAAAA CATC AGC GATG ACAACCACACACTCT SSON_2467 2607855 - 2608130 + | hypothetical protein yfdY 2608449 - 2608207 - | hypothetical protein ddg 2608802 - 2609722 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 3155 2609756 - 2609783 + T 100 -11.4 -5.4756 | opp_overlap 2609754 TCCCTCCTCAAATCG GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3156 2610191 - 2610172 - T 100 -13.6 -4.8622 | opp_overlap 2610172 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG TERM 3157 2610172 - 2610191 + T 100 -13.6 -3.89215 | opp_overlap 2610172 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG SSON_2470 2611452 - 2610214 - | aminotransferase TERM 3158 2611497 - 2611514 + H 71 -6.9 -4.11394 | overlap 2611499 2611510 ACCGTCCGAGCGACG CTGCCAC AATG GTGGCTG TTTTGAAAATAGCCT SSON_2472 2612648 - 2613151 + | IS1 ORF TERM 3159 2613237 - 2613203 - f 70 -9.9 -2.94422 | gap 1, overlap 2613200 2613202 2613226 GAGGGCGAAAAAGAG GCCAGCGCC-GCGCGG CAGA CCAAGCTGGCGCTGGA TATCGCCAACAAAAC TERM 3160 2613474 - 2613453 - f 78 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC SSON_2473 2614318 - 2615052 + | putative 2-component transcriptional regulator SSON_2474 2615065 - 2615922 + | putative ARAC-type regulatory protein TERM 3161 2616778 - 2616754 - T 79 -8.5 -4.23213 | opp_overlap 2616754 CCGATACTGAAGAAA TCGACCTCATC GCA GAAGTGGTCGA TGATGTAGCACACCG TERM 3162 2617306 - 2617340 + T 72 -5.1 -4.72486 | gap 2, opp_overlap 2617311, overlap 2617309 2617311 2617319 CGCTTGTTATCACGG GAATAGGC-CA-GCTGC GCG GCAGCCTGCGCCTGTTG TTTTTGGCGTTTATC TERM 3163 2617309 - 2617337 + T 77 -6.8 -4.45259 | gap 2, opp_overlap 2617311, overlap 2617306 2617311 2617319 TTGTTATCACGGGAA TAGGC-CA-GCTGC GCG GCAGCCTGCGCCTG TTGTTTTTGGCGTTT SSON_2476 2619482 - 2618445 - | exoaminopeptidase TERM 3164 2618558 - 2618528 - G 77 -8.4 -4.11216 | gap 2 GCTCCATCTGCAAAA TGTCGCGGCAATCG GCAAT CGAT-GCCGCG-CA ATGTCCGTGGCGGGT TERM 3165 2619928 - 2619887 - R 77 -11.1 -3.22298 | gap 2 GCCATTCACCAGCAA GGTGCGCGTCATATCAGAG CAGTAC CCCTGATA-GA-GCGCACC AAAATCAAGAGTGAC TERM 3166 2619966 - 2620017 + r 81 -13 -2.62184 | gap 1, opp_overlap 2619965, overlap 2619950 CCTGCTGCAACAATC TTGTCGCTGGC-TTTGCCGTGCGGC AGC GCCCCACGCCAGCCGCTGGCGACAA TGGTGTCAAAAGAGG SSON_2478 2621829 - 2620582 - | putative transport protein TERM 3167 2621257 - 2621283 + g 76 -12.4 -2.50994 | opp_overlap 2621259 2621264, overlap 2621256 2621259 2621264 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCACTTCAC TERM 3168 2621264 - 2621276 + g 72 -5.5 -4.56607 | opp_overlap 2621264 2621259, overlap 2621259 2621257 2621256 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC SSON_2479 2622177 - 2621851 - | putative PTS system enzyme IIB component TERM 3169 2622384 - 2622359 - R 72 -8.3 -3.70674 | overlap 2622357 2622360 2622362 GTATGATTTAAAAGA TTATCGGGAGA GTTA CCTCCCGATAT AACAGAAAGGATTTA TERM 3170 2622383 - 2622360 - R 77 -11.8 -2.81922 | overlap 2622359 2622357 2622362 TATGATTTAAAAGAT TATCGGGAGA GTTA CCTCCCGATA TAACAGAAAGGATTT TERM 3171 2622381 - 2622362 - R 70 -10 -2.95081 | overlap 2622360 2622359 2622357 TGATTTAAAAGATTA TCGGGAGA GTTA CCTCCCGA TATAACAGAAAGGAT glk 2623362 - 2622397 - | glucokinase SSON_2481 2623566 - 2624822 + | hypothetical protein SSON_2482 2624937 - 2625263 + | hypothetical protein TERM 3172 2625320 - 2625287 - T 73 -9.5 -3.44319 | opp_overlap 2625297, overlap 2625288 TCCAATGGAGCACAA TGCCTGATGCGACGC TAGC GCGTCTTATCAGGCC TACAAACCGGCTCTT TERM 3173 2625319 - 2625288 - T 81 -13 -2.6627 | opp_overlap 2625297, overlap 2625287 CCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCGGCTCT SSON_2484 2626642 - 2625404 - | manganese transport protein MntH TERM 3174 2626390 - 2626403 + g 74 -2.4 -5.0538 | opp_overlap 2626390 GATAGTGATCACGAA TCTG CTCCGC CAGA TTTTTTCCGGTGGCA TERM 3175 2626673 - 2626658 - H 73 -7.6 -4.07568 | opp_overlap 2626653 2626658 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTATGATA TERM 3176 2627571 - 2627592 + G 70 -7.3 -4.00782 | CGTCGTTGCTGCGCT GGTACTGAA CATG TTCAGCACC TTTATCGTGCTGTCG nupC 2626978 - 2628180 + | permease of transport system for 3 nucleosides TERM 3177 2628230 - 2628183 - f 100 -17.2 -4.07687 | opp_overlap 2628184 2628197, overlap 2628184 2628186 2628197 ACTGGTGCTGTAAAA CCATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC TERM 3178 2628184 - 2628229 + F 100 -16.3 -3.17212 | opp_overlap 2628184 2628183 2628186 2628197, overlap 2628197 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3179 2628229 - 2628184 - f 100 -20.7 -3.04398 | opp_overlap 2628184 2628197, overlap 2628183 2628186 2628197 CTGGTGCTGTAAAAC CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3180 2628227 - 2628186 - f 100 -17.5 -3.08032 | opp_overlap 2628184 2628197, overlap 2628184 2628183 2628197 GGTGCTGTAAAACCA TACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCC TGTTAATCAGCTAAT TERM 3181 2628197 - 2628216 + F 100 -15 -5.04987 | opp_overlap 2628197 2628186 2628184 2628183, overlap 2628184 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3182 2628216 - 2628197 - f 100 -15 -5.43414 | opp_overlap 2628184 2628197, overlap 2628186 2628184 2628183 ACCATACATAAAAAA GCCGGGGA TCAT TCCCCGGC TTTTTTACGCCTGTT TERM 3183 2629699 - 2629683 - f 80 -6.5 -4.74215 | AGATGATGAAGAAAA CGGGTAC CAG GTAACCG GCAATAAAGTCGTTT TERM 3184 2630617 - 2630598 - f 100 -11.4 -5.43414 | AGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTGGAAATTTGGTGG TERM 3185 2631158 - 2631146 - g 82 -9.1 -4.28762 | overlap 2631136 ACAACGTCACCAAAA CCTGG CGT CCAGG GTGGCAAAGCCCGAC yfeC 2631038 - 2631397 + | hypothetical protein TERM 3186 2631524 - 2631510 - g 71 -2.8 -4.87318 | overlap 2631502 TGGAAAACGGAAAAA TTTCCC GGC GTGAAA GGCGGTCGTGCCAGA yfeD 2631399 - 2631791 + | hypothetical protein TERM 3187 2631794 - 2631828 + T 84 -8.6 -4.58663 | opp_overlap 2631800, overlap 2631800 CGAATCAGCATAAAT AAAAAACGGCAGGATA TTA TCTCCTGCCGTTTATC TTTTTACACGCTAAT TERM 3188 2631822 - 2631800 - T 100 -12 -5.73978 | opp_overlap 2631794 2631800 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC TERM 3189 2631800 - 2631822 + T 100 -12 -4.55887 | opp_overlap 2631800, overlap 2631794 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC gltX 2633258 - 2631843 - | glutamyl-tRNA synthetase TERM 3190 2633949 - 2633917 - H 71 -9.9 -3.19463 | opp_overlap 2633918 2633926, overlap 2633918 2633926 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATACTCAA TERM 3191 2633918 - 2633948 + H 87 -14.9 -2.90212 | opp_overlap 2633918 2633917 2633926, overlap 2633926 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATACTCA TERM 3192 2633948 - 2633918 - H 80 -13.4 -2.51464 | opp_overlap 2633918 2633926, overlap 2633917 2633926 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATACTCA TERM 3193 2633926 - 2633940 + H 100 -8.5 -5.24989 | opp_overlap 2633926 2633918 2633917, overlap 2633918 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3194 2633940 - 2633926 - H 100 -9.2 -5.17576 | opp_overlap 2633918 2633926, overlap 2633918 2633917 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3195 2634033 - 2634009 - H 74 -8.6 -3.96483 | gap 2 AGCGCAGCGAAACAA CGGAGCCGCTCG CGG CGA-CGGC-CCG AAGGGCGAGCGAAGC TERM 3196 2634105 - 2634073 - H 71 -9.9 -3.19463 | opp_overlap 2634074 2634082, overlap 2634074 2634082 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATTTGTAA TERM 3197 2634074 - 2634104 + H 88 -14.9 -2.94194 | opp_overlap 2634074 2634073 2634082, overlap 2634082 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3198 2634104 - 2634074 - H 80 -13.4 -2.51464 | opp_overlap 2634074 2634082, overlap 2634073 2634082 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATTTGTA TERM 3199 2634096 - 2634082 - H 100 -9.2 -5.17576 | opp_overlap 2634074 2634082, overlap 2634074 2634073 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3200 2634082 - 2634096 + H 100 -8.5 -5.24989 | opp_overlap 2634082 2634074 2634073, overlap 2634074 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC flxA 2634191 - 2634532 + | hypothetical protein yfeR 2635449 - 2634523 - | putative transcriptional regulator LYSR-type TERM 3201 2635757 - 2635772 + G 73 -9 -3.69621 | TTTGTGGGTAATGTG CAGCAC CTTC GTGCTG TTTCCGATTCTGGGT yfeH 2635539 - 2636537 + | putative cytochrome oxidase ypeB 2636752 - 2636534 - | putative cytoplasmic protein ligA 2638769 - 2636754 - | NAD-dependent DNA ligase LigA TERM 3202 2638808 - 2638792 - R 93 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAGGAGTTA zipA 2639826 - 2638840 - | cell division protein ZipA TERM 3203 2639394 - 2639370 - G 76 -12.1 -2.52464 | GCGGTGCTGAATGCA CAGGCTGCGGC GCT GGCGCAACCTG TGGCGAAACTGGCTG TERM 3204 2639927 - 2639961 + H 72 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3205 2640080 - 2640090 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3206 2640359 - 2640369 + G 72 -6.8 -4.20516 | AACTGGATTGCCGCT CCGT TTA ACGG TTTATTGGCTGAACA cysZ 2640056 - 2640817 + | putative sulfate transport protein CysZ TERM 3207 2640876 - 2640857 - f 77 -10.6 -3.34398 | opp_overlap 2640857, overlap 2640855 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3208 2640857 - 2640876 + F 93 -12.8 -3.7347 | opp_overlap 2640857 2640855 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3209 2641482 - 2641468 - g 82 -3.4 -5.19261 | overlap 2641469 AAATTCACGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2641002 - 2641973 + | cysteine synthase A TERM 3210 2642002 - 2642017 + F 100 -9 -5.26316 | opp_overlap 2642002 2641993 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC TERM 3211 2642017 - 2642002 - f 100 -9 -5.08011 | opp_overlap 2642002, overlap 2641993 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC ptsH 2642357 - 2642614 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3212 2642976 - 2642947 - g 72 -6.5 -4.36903 | gap 1, opp_overlap 2642947 2642947, overlap 2642949 CTGATTAAAGATAAA CACATGA-CAGCTG ACG CAGCTGCTCATGAA GTTATCGAAGGTCAG TERM 3213 2642974 - 2642949 - g 88 -11.3 -3.78193 | gap 1, opp_overlap 2642947 2642947, overlap 2642947 GATTAAAGATAAACA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2642659 - 2644386 + | phosphoenolpyruvate-protein phosphotransferase crr 2644427 - 2644936 + | glucose-specific PTS system component TERM 3214 2645022 - 2645047 + F 100 -9.8 -5.61596 | opp_overlap 2645022 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3215 2645047 - 2645022 - f 72 -9.1 -3.61398 | opp_overlap 2645022 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_2507 2645037 - 2646383 + | IS4 orf TERM 3216 2646394 - 2646365 - T 89 -9.3 -4.59109 | overlap 2646367 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACGCCCATCGGCGC TERM 3217 2646392 - 2646367 - T 100 -16.3 -3.90762 | overlap 2646365 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACGCCCATCGGC pdxK 2647267 - 2646416 - | pyridoxal kinase TERM 3218 2646707 - 2646720 + g 77 -6.7 -4.56597 | CACCCATTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA TERM 3219 2647589 - 2647599 + G 72 -6.8 -4.25458 | GTAACCGCATTGACA CTGC CGA GCAG TTTATTGATAAGGTT yfeK 2647372 - 2647740 + | hypothetical protein cysM 2648654 - 2647743 - | cysteine synthase B TERM 3220 2647816 - 2647800 - G 76 -12.3 -2.64155 | overlap 2647796 CCCGGTGGAAAGGTA GCGATCG CCA CGATCGC AGATGATCGCTACCA TERM 3221 2648766 - 2648739 - R 89 -9.1 -4.72272 | gap 1, opp_overlap 2648739 2648756 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysA 2649885 - 2648788 - | sulfate/thiosulfate transporter subunit TERM 3222 2649445 - 2649459 + g 88 -11.4 -3.85698 | overlap 2649438 AGCCAGCGCGCGCGC CAGCGC CAC GCGCTG TTTCTGGCCGCCGGA cysW 2650750 - 2649875 - | sulfate/thiosulfate transporter permease subunit cysU 2651583 - 2650750 - | sulfate/thiosulfate transporter subunit TERM 3223 2651396 - 2651383 - G 72 -8.1 -3.9009 | opp_overlap 2651379 2651383 AATCGATGCCACAAA CGCTG ACAG CAGCG TTACTTTGTAGGCCG cysP 2652599 - 2651583 - | thiosulfate transporter subunit TERM 3224 2652757 - 2652734 - R 91 -11 -4.19735 | GGGTTTAAAACGAAA TCCTCCCCAC AAAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2653561 - 2652770 - | short chain dehydrogenase yfeT 2654547 - 2653690 - | hypothetical protein TERM 3225 2655575 - 2655557 - g 79 -2.4 -5.1925 | gap 1 GCAGAAGCTAAAAAA CGCC-TG GATCAA CACGGCG GCTTTATTCGTCAGG murQ 2654711 - 2655607 + | N-acetylmuramic acid-6-phosphate etherase TERM 3226 2655790 - 2655806 + F 82 -7.9 -4.60487 | CGTCATTTTGACCAG CGACCAG GTG CAGGTCG TTTTTGGGCCTGGTA TERM 3227 2656236 - 2656251 + F 76 -8.2 -4.18763 | opp_overlap 2656222 2656236 ACCCCGCTGCAACCA CCGGTG ACTA CGCCGG TTTTCACGATTTCTT SSON_2519 2657040 - 2658344 + | hypothetical protein TERM 3228 2658351 - 2658378 + T 95 -13.5 -3.79251 | opp_overlap 2658351 CAAAAGTAATAAAAA GGCCAGTCAGT TTTGTT ACTGGCTGGCC TTTAATCATCGAATC TERM 3229 2658378 - 2658351 - T 100 -11.3 -5.28166 | opp_overlap 2658351 CAAAAGTAATAAAAA GGCCAGTCAGT TTTGTT ACTGGCTGGCC TTTAATCATCGAATC SSON_2520 2659328 - 2658402 - | hypothetical protein TERM 3230 2658448 - 2658458 + g 72 -8.2 -3.72576 | GCGAAGTAATAGCCG CCGG TTA CCGG TTTGGTGAAACGCAA TERM 3231 2659341 - 2659323 - G 85 -10.3 -4.20868 | opp_overlap 2659323 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT TERM 3232 2659323 - 2659341 + g 77 -10.3 -3.63341 | opp_overlap 2659323 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT SSON_2521 2659972 - 2659397 - | hypothetical protein TERM 3233 2659744 - 2659724 - G 77 -3.1 -5.06451 | CATCACTTCAAAAAA GCGCACCAC GTT GCCGTTCGC GGTTTTCATTCCGCT yfeZ 2660488 - 2660033 - | hypothetical protein TERM 3234 2660277 - 2660261 - G 74 -2.1 -5.06816 | overlap 2660262 2660263 ACCGCTCAACAAAAA CGCCAGC ACC GCCGGAA TGCCTGGAATCAGCC SSON_2523 2660894 - 2660469 - | putative acetyltransferase TERM 3235 2661909 - 2661898 - g 72 -5.8 -4.36914 | opp_overlap 2661898, overlap 2661899 CGTTTCGTCAGAAAA TCGC CACA GCGA TTGCTGAAGGCGTGA amiA 2661108 - 2661977 + | N-acetylmuramoyl-l-alanine amidase I TERM 3236 2662205 - 2662251 + G 100 -17.5 -3.69323 | gap 2 GCCTGCTTCCGCCAC CGCTCATCGCC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCG TTTCACTGGTAGTGC TERM 3237 2662298 - 2662309 + G 100 -3.6 -5.7946 | overlap 2662296 TGTTCCCACCAGCCA CGCG AATG TGCG TTTTTTTATTGCCGA hemF 2661981 - 2662880 + | coproporphyrinogen III oxidase yfeG 2663938 - 2662886 - | transcriptional regulator EutR TERM 3238 2663367 - 2663401 + g 70 -7.1 -4.02456 | gap 2, opp_overlap 2663387, overlap 2663395 2663397 TTCTCGCAAAACGTC GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC TTTATGCTGCTCTTT SSON_2527 2664490 - 2663984 - | hypothetical protein TERM 3239 2664032 - 2664064 + g 70 -4.8 -4.56597 | overlap 2664034 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCCAGCGGCCA SSON_2528 2665156 - 2664497 - | ethanolamine utilization protein eutL eutC 2666053 - 2665166 - | ethanolamine ammonia-lyase small subunit TERM 3240 2666089 - 2666119 + r 72 -8.9 -3.62096 | gap 1, opp_overlap 2666086 TCAGAAGAACAGTGA CGGATCGCCCGCCC GTTT GGTCAGGCGA-CCG TTTGCCATAATGCCC SSON_2531 2668850 - 2667447 - | reactivating factor for ethanolamine ammonia lyase TERM 3241 2668522 - 2668504 - G 85 -8.8 -4.5442 | CTGGCAACGACAAAA TCGCCCAG CGA CTGGGAGA GCACCATCACCGCCG eutH 2670073 - 2668847 - | EutH TERM 3242 2670056 - 2670038 - G 74 -7.5 -4.12254 | opp_overlap 2670037 2670038 2670040 TATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC TERM 3243 2670315 - 2670277 - R 71 -10.2 -2.72227 | opp_overlap 2670314, overlap 2670264 AAGACGCGGCAAGCA TCGCATCCGGCAATTGCA CCG CGCCACTGGCGGATGCGG CGTGAACGCCTTATC TERM 3244 2670355 - 2670387 + r 70 -9.8 -3.08812 | opp_overlap 2670364 2670367, overlap 2670354 TGTGCAATCCCGTAG GCTGGATAAGACGC GGCAA GCGTCGCATCCGGC ATTTATTGCGCCGCC eutG 2671604 - 2670390 - | hypothetical protein TERM 3245 2671379 - 2671357 - GR 80 -12.7 -3.02511 | GCGATGCCTTTAACA GCCAGGCTG CGCGT CAGCCCGGC GGTCATCCCTGCCTG eutJ 2672403 - 2671567 - | EutJ eutE 2673817 - 2672414 - | EutE TERM 3246 2673095 - 2673127 + g 72 -6.2 -4.33803 | gap 1 TTCATCCACCACTAC CGGCGGGTTGCCAGC GCCT GC-GGCAATCAGACG TTTATTGGTGTGTTT TERM 3247 2673303 - 2673319 + g 71 -2.1 -5.00616 | overlap 2673304 TGGTTGAGCAGCGTG ATCGCCC GCT GGGAGAC TTTTTTCGCCGCCGG TERM 3248 2673434 - 2673449 + g 70 -6 -4.2803 | opp_overlap 2673433 AGTTACCGAAGCCAC CACGCC CCAG GGCGCG TTTTCAATTAAAGTC TERM 3249 2673505 - 2673536 + g 70 -4.2 -4.60924 | gap 1, opp_overlap 2673508, overlap 2673507 GCGGAGAGAGACACT CAACGC-CTGGCGTG CCG CGCGCCTGAGCGACG TTTTTGGCAAATTTA cchB 2674116 - 2673829 - | detox protein cchA 2674516 - 2674223 - | detox protein TERM 3250 2674324 - 2674357 + g 71 -9.5 -3.55444 | gap 1 CCAGCTCGCCGATAC GCTGTG-CCGCTGCGG CAC CTGCATCGGTCGCGGC TTTACAGGCTGCAAC eutD 2675571 - 2674555 - | phosphotransacetylase TERM 3251 2675531 - 2675520 - G 70 -3.6 -4.60041 | ACGCATCCGGAAAAA CCAC TCTG GCGG GCGCTCGCAACGCCA SSON_2539 2676371 - 2675568 - | hypothetical protein TERM 3252 2676221 - 2676210 - G 70 -5.8 -4.16842 | opp_overlap 2676213 TTCATCGTCAACAAA CAGG CGGC CCTG CTCGTCAATAAACTT SSON_2540 2677069 - 2676368 - | hypothetical protein SSON_2541 2677523 - 2677044 - | hypothetical protein TERM 3253 2677422 - 2677432 + gr 71 -3.2 -4.82901 | CTTATCATTAAATTC CACG GCC TGTG TTTTTCTGGCGAGGG SSON_2542 2677943 - 2677536 - | hypothetical protein TERM 3254 2678052 - 2678037 - R 77 -3.4 -5.10033 | TGAATATAAATAAAA TAATAT CGAG ATATTA TATAGACTGCTTTTT TERM 3255 2678147 - 2678118 - R 100 -15.1 -3.66378 | overlap 2678119 TATATTGCAGCCAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAAAAAGA TERM 3256 2678146 - 2678119 - R 100 -18.6 -2.79505 | overlap 2678118 ATATTGCAGCCAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAAAAAG SSON_2543 2680443 - 2678164 - | malic enzyme TERM 3257 2679237 - 2679216 - G 72 -10.1 -3.32769 | CGTCGAAATCAGCAA TCGGACGCG TCGC CACGCCCGA CTCCATCGCCGCTTT TERM 3258 2679882 - 2679892 + g 71 -3.2 -4.82901 | opp_overlap 2679871 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3259 2680507 - 2680479 - H 78 -6.1 -4.55697 | gap 1, opp_overlap 2680497 ACGTTCACAAATAAA GTGTGTGGGCAA CACCCC CTGCCCACA-AC GTGGCGCACATTATT TERM 3260 2681201 - 2681242 + G 100 -10.9 -5.04325 | opp_overlap 2681184, overlap 2681202 GCAACCTGACGCTGC TGTTTTCTTTTGCACAGGC ACGG GCCTGTGCGGAAGCAGGCG TTTTTCTGATTTCGC TERM 3261 2681202 - 2681241 + G 88 -12.2 -3.6151 | overlap 2681201 CAACCTGACGCTGCT GTTTTCTTTTGCACAGGC ACGG GCCTGTGCGGAAGCAGGC GTTTTTCTGATTTCG talA 2680732 - 2681682 + | transaldolase A TERM 3262 2682004 - 2681988 - g 74 -7.9 -4.14511 | opp_overlap 2681988 AACTGCATTCGAAAA CCCCAGG CCA CCCGGAG ATTGGTTATACGCCA tktB 2681702 - 2683705 + | transketolase TERM 3263 2683718 - 2683769 + T 100 -15.8 -3.30243 | TGATAGTGATCGCCG GATGCTGATTGCCGGATGCGACGC TGAC GCGTCTTATCCGGCCTACAGCGTC TTATCCGGCCTACAT TERM 3264 2683842 - 2683819 - T 85 -12.4 -3.35798 | opp_overlap 2683833 ACGGGTGATCCACAA CGTGGGCCAG GCGT CTGGCCCATG CCAGTTATCGCAGGT SSON_2546 2684844 - 2683801 - | hypothetical protein TERM 3265 2684843 - 2684832 - G 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAG CGCA TGGACGGTACGACCC yffH 2685545 - 2684970 - | hypothetical protein TERM 3266 2685546 - 2685595 + r 79 -9.3 -4.03234 | overlap 2685547 GATTTGTTGCGTCAT ACCGACTCCACAGCGCGAAATGA ACAA TTATATTACGCTGTGAAGTCGGG TTTGTCTGCGCAGGC TERM 3267 2685547 - 2685594 + r 80 -12.8 -3.01726 | overlap 2685546 ATTTGTTGCGTCATA CCGACTCCACAGCGCGAAATGA ACAA TTATATTACGCTGTGAAGTCGG GTTTGTCTGCGCAGG yffG 2687592 - 2685613 - | putative oxidoreductase Fe-S binding subunit TERM 3268 2687816 - 2687839 + G 100 -5.2 -5.55698 | gap 1, opp_overlap 2687813, overlap 2687816 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3269 2687816 - 2687838 + G 72 -7.6 -3.91792 | opp_overlap 2687813, overlap 2687816 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3270 2688515 - 2688505 - g 71 -3.2 -4.81212 | overlap 2688507 GTCAGTAGAAGAAAA GACC CGC GATC TCCACGAGGCCAAGC narQ 2687798 - 2689498 + | nitrate/nitrite sensor protein NarQ TERM 3271 2689721 - 2689740 + G 82 -2.8 -5.26875 | gap 1, overlap 2689723 2689724 GGCAATCCTGTTGTG TCTGACAGG GAC CCTGGC-GA TTTTTTCATTGCCCG TERM 3272 2691269 - 2691246 - g 85 -6.6 -4.74801 | opp_overlap 2691262, overlap 2691248 2691260 GAACGCTACGAAAAA GGGGTGGCGA AAAT TCTCCACCGC AGCCTGCGCTGGATT TERM 3273 2691262 - 2691282 + G 77 -9.7 -3.67102 | opp_overlap 2691248 2691246 2691260 GGGTGGCGAAAATTC TCCACCGCA GCC TGCGCTGGA TTGTGATTTATGTCC TERM 3274 2691656 - 2691639 - g 70 -6.9 -4.11363 | AACAAGATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCGCCAGCAATT acrD 2689662 - 2692775 + | aminoglycoside/multidrug efflux system TERM 3275 2692815 - 2692780 - f 82 -11.4 -3.53444 | opp_overlap 2692787, overlap 2692787 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCCAATG TGTCGCCTTTTTCA ACTTTCCGATTAAGA TERM 3276 2692808 - 2692787 - f 91 -7.3 -5.57396 | opp_overlap 2692787, overlap 2692780 ATAAGCAATAAAAAA GGCGACA TGCCAATG TGTCGCC TTTTTCAACTTTCCG TERM 3277 2692787 - 2692808 + F 84 -8.7 -4.70879 | opp_overlap 2692787 2692780 ATAAGCAATAAAAAA GGCGACATG CCAA TGTGTCGCC TTTTTCAACTTTCCG TERM 3278 2692826 - 2692850 + F 74 -11.5 -2.79609 | opp_overlap 2692829 2692832, overlap 2692825 2692823 2692829 2692832 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCGGGTTCTTG CTGTTTATACTTTGT TERM 3279 2692829 - 2692847 + F 82 -11 -3.52009 | opp_overlap 2692829 2692832, overlap 2692826 2692825 2692823 2692832 CAACTTTCCGATTAA GAACCTGC TCA GCGGGTTC TTGCTGTTTATACTT TERM 3280 2693564 - 2693532 - g 72 -4.8 -4.64676 | opp_overlap 2693539 CCACCCGCAATAAAA TCACCGATGCGGCC TCAGC GGCGGCATTAATGA CTGAAATGCCTGCAA yffB 2693315 - 2693671 + | hypothetical protein dapE 2693675 - 2694802 + | succinyl-diaminopimelate desuccinylase SSON_2553 2694806 - 2695030 + | hypothetical protein TERM 3281 2695113 - 2695059 - T 79 -11.3 -3.30124 | opp_overlap 2695059 2695060 2695102, overlap 2695060 2695092 CCGTAGGCCGGATAA GGCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGCG TCTTATCAGGCCAGG TERM 3282 2695112 - 2695060 - T 86 -14.8 -2.57931 | opp_overlap 2695059 2695060 2695102, overlap 2695059 2695092 CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG TERM 3283 2695060 - 2695112 + T 78 -12.6 -2.52623 | opp_overlap 2695060 2695059 2695092, overlap 2695059 2695102 CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG ypfH 2695838 - 2695140 - | esterase YpfH ypfI 2697927 - 2695912 - | hypothetical protein TERM 3284 2697538 - 2697527 - G 72 -5.8 -4.38154 | AGATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA SSON_2556 2698790 - 2697942 - | hypothetical protein purC 2699671 - 2698958 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3285 2699022 - 2699058 + g 72 -5.7 -4.55295 | opp_overlap 2699035, overlap 2699024 ATCAGGCCACCGAGG CTCTGGCGGAAACGGTC TTT GTCCATTTTCTCCAGTG TTTCTTTGTCCCACA TERM 3286 2699853 - 2699880 + r 73 -4 -4.90266 | opp_overlap 2699857, overlap 2699855 2699857 CGTATCATATCAGAA AAAAGGGCCGGA TGAT TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3287 2699857 - 2699876 + r 72 -9.2 -3.61182 | opp_overlap 2699857, overlap 2699855 2699853 TCATATCAGAAAAAA GGGCCGGA TGAT TCCAGCCC TGTATTTTTACTTGC TERM 3288 2699876 - 2699857 - R 100 -11.4 -5.34555 | opp_overlap 2699855 2699853 2699857 TCATATCAGAAAAAA GGGCCGGA TGAT TCCAGCCC TGTATTTTTACTTGC nlpB 2700921 - 2699884 - | lipoprotein TERM 3289 2700058 - 2700076 + g 76 -11 -3.41878 | GCCCAGTTCCTGCCA GTCGCTGT CAG ACAGCGGC TTATAAGTTACGGCC TERM 3290 2700507 - 2700535 + g 77 -6 -4.62069 | opp_overlap 2700488, overlap 2700510 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2701813 - 2700935 - | dihydrodipicolinate synthase gcvR 2701959 - 2702531 + | glycine cleavage system transcriptional repressor bcp 2702531 - 2703001 + | thioredoxin-dependent thiol peroxidase TERM 3291 2703812 - 2703800 - g 82 -2.6 -5.35815 | opp_overlap 2703803 CAGATGAAAGAAAAA CAGC GCCTT GCCG CAAGCTGGTTTGCCA TERM 3292 2703833 - 2703845 + G 73 -9.1 -3.6682 | TGGTTTGCCAATGGC GGGGA GGA TCCCC TTTCCCTCACTCAGG hyfA 2703215 - 2703871 + | hydrogenase 4 Fe-S subunit hyfB 2703871 - 2705889 + | hydrogenase 4 subunit B TERM 3293 2706490 - 2706502 + G 72 -7.7 -3.95022 | CTGCTTCATTGAGAT GGGAA AAA TTCCC TTTGATGTTGCTGAA TERM 3294 2706750 - 2706765 + G 79 -2.4 -5.2189 | opp_overlap 2706748 CAATCGCAGAAAACA CGCTGG CACG CGGGCG TTTTTTACTCATTCA hyfC 2705879 - 2706847 + | hydrogenase 4 membrane subunit TERM 3295 2708023 - 2708035 + G 73 -9.1 -3.69283 | GATTACCGGTGTGCC GCCGT TCA ACGGC TTCTTCAGTAAATTC hyfD 2706986 - 2708302 + | hydrogenase 4 subunit D hyfE 2708314 - 2708964 + | hydrogenase 4 membrane subunit TERM 3296 2709859 - 2709871 + G 95 -9.1 -4.94972 | CGGCATGTTGTCGGT TGCCG TGG CGGCA TTTTTCATTCTGGTA hyfF 2708969 - 2710549 + | hydrogenase 4 subunit F TERM 3297 2711408 - 2711422 + G 71 -2.8 -4.75309 | TCATTTGCTCAACCT TGGC CTCTCCT GCCA TTTTGTTGGATTTGA hyfG 2710539 - 2712254 + | hydrogenase 4 subunit TERM 3298 2712715 - 2712683 - g 73 -4.2 -4.75472 | gap 1 GGCACAGCAACAAAA TGCGCCACAAAAC CGCGAAAT GTTATG-GGCGCA AGCGAGCGTCTGCCC hyfH 2712264 - 2712803 + | hydrogenase 4 subunit H hyfI 2712800 - 2713558 + | hydrogenase 4 Fe-S subunit TERM 3299 2713951 - 2713929 - gf 77 -11.3 -3.16055 | GAAATTGTGCAGGAA CCGGCCATC TATCT GATGGCCAG AAAAATTGCGTGAGA SSON_2571 2713488 - 2713964 + | putative protein processing element hyfR 2714015 - 2716006 + | putative 2-component regulator, interaction with sigma 54 TERM 3300 2717098 - 2717073 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 2717081, overlap 2717074 2717088 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 3301 2718078 - 2718106 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SSON_2574 2716935 - 2718131 + | ISSfl2 ORF TERM 3302 2718326 - 2718361 + T 74 -8.2 -3.96469 | opp_overlap 2718329, overlap 2718327 GTCAGGAATCCTGAA AAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGA TTATTCTTGCGCTAT TERM 3303 2718327 - 2718360 + T 78 -11.7 -2.97158 | opp_overlap 2718329, overlap 2718326 TCAGGAATCCTGAAA AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG ATTATTCTTGCGCTA TERM 3304 2718358 - 2718329 - T 100 -16.5 -4.62872 | opp_overlap 2718327 2718326 AGGAATCCTGAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA AGATTATTCTTGCGC perM 2719423 - 2718362 - | putative permease TERM 3305 2720115 - 2720089 - g 100 -16.6 -3.07816 | opp_overlap 2720098 2720105, overlap 2720091 GCGCGAGCGATGGAA GATCAGCAGCGC AGC GCGCCGCTGACC TGGGTCGGCGCGTTA TERM 3306 2720113 - 2720091 - g 95 -15.6 -3.09878 | opp_overlap 2720098 2720105, overlap 2720089 GCGAGCGATGGAAGA TCAGCAGCGC AGC GCGCCGCTGA CCTGGGTCGGCGCGT SSON_2576 2719636 - 2721099 + | hypothetical protein TERM 3307 2721209 - 2721197 - g 100 -2.6 -5.75342 | CCTGCTGAAAAAAAA CGGC GTGGA GCCA GAAGTGGTACTCTAC SSON_2577 2721120 - 2721479 + | putative oxidoreductase SSON_2578 2722363 - 2721617 - | DNA replication initiation factor TERM 3308 2722373 - 2722415 + r 76 -7.7 -4.26393 | opp_overlap 2722369, overlap 2722379 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2723702 - 2722413 - | uracil transporter TERM 3309 2722922 - 2722937 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3310 2723743 - 2723777 + r 83 -4.3 -5.44198 | opp_overlap 2723751, overlap 2723746 2723751 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3311 2723746 - 2723774 + r 78 -6 -4.74161 | opp_overlap 2723751, overlap 2723743 2723751 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3312 2723751 - 2723769 + r 90 -10.3 -4.2711 | opp_overlap 2723751, overlap 2723746 2723743 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT TERM 3313 2723769 - 2723751 - R 100 -11 -5.81412 | opp_overlap 2723746 2723743 2723751 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT upp 2724414 - 2723788 - | uracil phosphoribosyltransferase purM 2724739 - 2725776 + | phosphoribosylaminoimidazole synthetase TERM 3314 2725917 - 2725886 - g 100 -13.7 -3.72027 | opp_overlap 2725908 2725912, overlap 2725883 AGTTTTCAGCAATAA GGCCGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3315 2725912 - 2725924 + G 72 -10.5 -3.02144 | opp_overlap 2725886, overlap 2725908 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACGCATAC purN 2725776 - 2726414 + | phosphoribosylglycinamide formyltransferase TERM 3316 2726431 - 2726450 + F 100 -10.7 -4.74504 | opp_overlap 2726430 2726431 GCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3317 2726450 - 2726431 - f 72 -10.7 -2.78679 | opp_overlap 2726431, overlap 2726430 GCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3318 2728421 - 2728384 - g 70 -6.9 -4.10657 | overlap 2728385 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2726585 - 2728651 + | polyphosphate kinase TERM 3319 2728679 - 2728705 + G 74 -10.8 -3.23853 | overlap 2728677 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2728656 - 2730197 + | exopolyphosphatase TERM 3320 2730203 - 2730231 + T 100 -18.2 -3.6279 | CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT SSON_2585 2732479 - 2730236 - | putative cytochrome C-type biogenesis protein TERM 3321 2732364 - 2732353 - G 82 -2.2 -5.32599 | overlap 2732345 GATAAAAGAGAAAAA CCTC ACCG GAAG AAATATGCGCGAAAG SSON_2586 2732831 - 2733022 + | hypothetical protein SSON_2587 2733333 - 2733851 + | putative outer membrane lipoprotein SSON_2588 2733867 - 2734406 + | hypothetical protein TERM 3322 2734446 - 2734475 + T 85 -12.3 -3.41693 | opp_overlap 2734451, overlap 2734451 TGATTCTTGAAGATA AAAAACCCTCTGT AGTA ACAGAGGGTTTTG TTCATTCATAGTGCA TERM 3323 2734451 - 2734470 + T 100 -12.2 -4.80178 | opp_overlap 2734451, overlap 2734446 CTTGAAGATAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA TERM 3324 2734470 - 2734451 - T 100 -12.2 -5.47159 | opp_overlap 2734446 2734451 CTTGAAGATAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA guaA 2736078 - 2734501 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3325 2736140 - 2736118 - R 100 -14.9 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA GTCGGGCGA AGAGAATCAGGAGCC guaB 2737613 - 2736147 - | inositol-5-monophosphate dehydrogenase TERM 3326 2737065 - 2737079 + g 73 -4.2 -4.79667 | overlap 2737076 GTCATCAACCACCAG CGCTTT TTC AACGCG TTTTTCGTGCATTTT xseA 2737775 - 2739145 + | exodeoxyribonuclease VII large subunit SSON_2592 2739378 - 2739142 - | hypothetical protein engA 2740898 - 2739426 - | GTP-binding protein EngA TERM 3327 2740996 - 2740965 - R 100 -13.8 -3.90048 | opp_overlap 2740971, overlap 2740966 2740971 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3328 2740995 - 2740966 - R 100 -17.3 -2.93708 | opp_overlap 2740971, overlap 2740965 2740971 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3329 2740990 - 2740971 - R 95 -11.4 -4.60746 | opp_overlap 2740971, overlap 2740966 2740965 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3330 2740971 - 2740990 + r 79 -9.2 -4.11216 | opp_overlap 2740966 2740965 2740971 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG SSON_2594 2742194 - 2741016 - | outer membrane protein assembly complex subunit YfgL TERM 3331 2741442 - 2741426 - G 78 -8.7 -4.23999 | overlap 2741438 CCAGAGCGAAAACAA CGCCGTT AAC AACGACG GGAGTCGTGTCAACA TERM 3332 2741598 - 2741587 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC SSON_2595 2742825 - 2742205 - | hypothetical protein TERM 3333 2742368 - 2742386 + g 77 -8.2 -4.07687 | GCAGCCCACCCTTCA CCTTTGAT GGT ATCAAGGG TTTTCAGCGCGGCAT TERM 3334 2742637 - 2742649 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2744117 - 2742843 - | histidyl-tRNA synthetase TERM 3335 2744081 - 2744106 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3336 2744190 - 2744144 - R 72 -3 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCC TCAATGTTTC GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 3337 2744219 - 2744199 - R 82 -13.3 -3.00298 | opp_overlap 2744193 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2745346 - 2744228 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2746386 - 2745373 - | hypothetical protein TERM 3338 2746666 - 2746629 - R 100 -18 -4.42653 | gap 1 ACTTCATTCATAAAA CATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT yfgB 2747825 - 2746671 - | hypothetical protein TERM 3339 2747587 - 2747607 + g 71 -9 -3.50832 | gap 1 TCTTCAACCACTTCC GGTGCGCGG ATCT CCGC-CACC TCTTTCAGTTTGCCG TERM 3340 2747914 - 2747883 - R 91 -8.7 -5.04249 | gap 2, opp_overlap 2747882 2747879 2747878, overlap 2747885 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT ndk 2748406 - 2747975 - | nucleoside diphosphate kinase pbpC 2750867 - 2748555 - | penicillin-binding protein 1C TERM 3341 2748931 - 2748956 + g 72 -7.6 -3.96148 | gap 2 TCTTGCTTCGCCTGC GGGCAGTCAGCG GCGA CGC-G-CTGCCC TTTGTCATCCAGCCA TERM 3342 2749843 - 2749830 - G 70 -3.8 -4.60949 | overlap 2749826 CAGACCATAAACAAA CGGT TTGAGC ACCG ATCCTGGCGATCGGA SSON_2602 2755829 - 2750868 - | hypothetical protein TERM 3343 2751143 - 2751153 + g 72 -6.8 -4.19238 | overlap 2751127 2751126 TGGCGCTACCGTTCG CCAG ATT CTGG TTTTCCAGTTCCAGA TERM 3344 2751612 - 2751629 + g 74 -2.7 -4.87892 | GTTCAGCAAAGTGTA CTGCT CATCGGGT AGCAG TTTATTTTCTTCCAG TERM 3345 2751853 - 2751866 + g 84 -8.1 -4.72272 | CAGATTTCACGCAGC GCACC CAGT GGTGC TTTTTGCTGACGGGC TERM 3346 2753405 - 2753363 - G 95 -10.9 -4.46112 | gap 2 GCGTACTCAAATAAA GATCATGACGATTCCAGGT TTTATCG ACC-GGAATCGTCA-GATC CAGCCCTTGAGCCGG TERM 3347 2754236 - 2754208 - G 76 -8.1 -4.27316 | overlap 2754216 2754226 TCGCCGAATTCAAAA CCAGGTAAGGCTG ACA CAGCCTCACGCAG TGGGCGCAGGAAAAG TERM 3348 2755666 - 2755682 + g 95 -12.3 -4.26903 | overlap 2755678 TGGGCCAGTTTTTGT CTCTCCG GCA CGGAGAG TTTTGCTGAACTCGC TERM 3349 2756746 - 2756774 + G 70 -3.7 -4.64676 | overlap 2756715 2756749 ACCAATTATCGTCAG CTGCGGCTCTGGT GTA ACGGCAGCCGTGG TTTTGTTAGCACTCG sseA 2756036 - 2756881 + | 3-mercaptopyruvate sulfurtransferase TERM 3350 2756890 - 2756933 + T 100 -18.4 -2.90194 | opp_overlap 2756897 2756904, overlap 2756893 2756897 2756904 GAAATAAGTATTTTA CAGGCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 3351 2756893 - 2756930 + T 100 -20.9 -2.69964 | opp_overlap 2756897 2756904, overlap 2756890 2756897 2756904 ATAAGTATTTTACAG GCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGC TGGTCTGGTTCGCGG TERM 3352 2756926 - 2756897 - T 86 -13.8 -3.12999 | opp_overlap 2756893 2756890 2756897 2756904, overlap 2756904 GTATTTTACAGGCAA TAAAAAACCGCC GAATTT GGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3353 2756897 - 2756926 + T 90 -14.5 -3.26433 | opp_overlap 2756897 2756904, overlap 2756893 2756890 2756904 GTATTTTACAGGCAA TAAAAAACCGCCG AATT TGGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3354 2756904 - 2756919 + T 100 -8.2 -5.52023 | opp_overlap 2756904 2756897, overlap 2756897 2756893 2756890 ACAGGCAATAAAAAA CCGCCG AATT TGGCGG TTTTTTATTGCTGGT TERM 3355 2756919 - 2756904 - T 100 -7.5 -5.49234 | opp_overlap 2756897 2756893 2756890 2756904, overlap 2756897 ACAGGCAATAAAAAA CCGCC GAATTT GGCGG TTTTTTATTGCTGGT TERM 3356 2757011 - 2757042 + T 79 -9 -4.10144 | gap 1, opp_overlap 2757001 2757014, overlap 2757014 GACAATACTCGCCAG TAACTCTCTTTTTGT CAA GCAA-AAGAGAGTTA TTATTGTTCTGTTAG TERM 3357 2757299 - 2757285 - T 89 -11.4 -4.15884 | opp_overlap 2757271 CCAAGTAAATAATAA CCGGAG TCT CTCCGG CGACAATTTACTGGT TERM 3358 2757348 - 2757371 + T 95 -12.4 -4.3208 | opp_overlap 2757343, overlap 2757350 CAGCAAGTAAGCCCG AATGCCGCCC TTTA GGGCGGCATA TTTTAGATTATCCGG TERM 3359 2757350 - 2757369 + T 100 -15 -3.76167 | opp_overlap 2757343, overlap 2757348 GCAAGTAAGCCCGAA TGCCGCCC TTTA GGGCGGCA TATTTTAGATTATCC sseB 2758150 - 2757374 - | enhanced serine sensitivity protein SseB TERM 3360 2757879 - 2757908 + g 83 -13 -3.02263 | opp_overlap 2757876, overlap 2757883 2757906 2757907 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCGCCTGT TERM 3361 2758251 - 2758286 + r 86 -11.8 -3.51976 | opp_overlap 2758248 2758247 2758263, overlap 2758247 2758254 AATTTGCAGAATTTG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA TTAGTTTACGCCGTT TERM 3362 2758254 - 2758283 + r 81 -13.5 -2.59569 | opp_overlap 2758248 2758247 2758263, overlap 2758251 2758247 TTGCAGAATTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATATTAGTTTACGCC pepB 2759575 - 2758292 - | aminopeptidase B TERM 3363 2758448 - 2758427 - G 70 -6.5 -4.16284 | gap 1, overlap 2758428 2758439 ATAGTTCTCAACAAA GTGCGACAGG AAG CCCGCCGC-C GTGCTCGCGCCTGCC TERM 3364 2759618 - 2759599 - R 95 -12.8 -4.07568 | TCCTTCTTTGTAAAA GGGCCGCC AGTT GGCAGCCC CAGGATTTTTCCGCT yfhJ 2759953 - 2759753 - | hypothetical protein fdx 2760300 - 2759965 - | [2FE-2S] ferredoxin, electron carrer protein hscA 2762152 - 2760302 - | chaperone protein HscA TERM 3365 2761633 - 2761645 + g 76 -9.1 -3.74693 | CATGCAACCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2762684 - 2762169 - | co-chaperone HscB TERM 3366 2762764 - 2762738 - R 84 -8.7 -4.6951 | gap 1, opp_overlap 2762738 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2763103 - 2762780 - | iron-sulfur cluster assembly protein SSON_2611 2763506 - 2763120 - | scaffold protein yfhO 2764772 - 2763534 - | putative aminotransferase SSON_2613 2765477 - 2764989 - | DNA-binding transcriptional regulator IscR TERM 3367 2765373 - 2765363 - G 75 -6.8 -4.38927 | GTTCCAGATAAGAAA GGGA AAT TCCC TGACGTTCGGAAATA TERM 3368 2765500 - 2765512 + r 91 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3369 2765562 - 2765609 + r 72 -8.6 -3.6715 | overlap 2765564 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 3370 2765564 - 2765607 + r 79 -11.2 -3.4149 | overlap 2765562 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT SSON_2614 2766515 - 2765778 - | putative ATP synthase beta subunit TERM 3371 2766399 - 2766436 + g 76 -7.9 -4.25104 | gap 1, overlap 2766389 2766402 GGAGTCGGGTTTCAC CAGT-GGATTAACCAGCC ACA GATTGGTTAATCCCATTG TTTTCATGGCACGGG TERM 3372 2766402 - 2766433 + g 70 -6 -4.25256 | gap 1, overlap 2766399 GTCGGGTTTCACCAG T-GGATTAACCAGCC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 3373 2766652 - 2766680 + G 79 -12.3 -3.02166 | opp_overlap 2766653, overlap 2766648 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 3374 2766679 - 2766653 - g 87 -13.6 -3.04263 | opp_overlap 2766652 2766648 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2766634 - 2767437 + | inositol monophosphatase SSON_2616 2767555 - 2768436 + | putative enzyme csiE 2768627 - 2769907 + | stationary phase inducible protein CsiE hcaT 2771038 - 2769899 - | putative 3-phenylpropionic acid transporter TERM 3375 2770179 - 2770163 - G 70 -10.1 -3.23216 | opp_overlap 2770163 2770166 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC TERM 3376 2770444 - 2770421 - G 86 -11 -3.9009 | overlap 2770412 2770441 AACGCAGGCCAGAAA GCGCCAGTTC TGGC GAACCAGCGC CAACCACGCAGACCA TERM 3377 2771171 - 2771160 - H 73 -2.2 -5.22794 | gap 1, opp_overlap 2771161, overlap 2771161 ACAAGCACTAAAAAA CTGCG ATC CGC-G ACGCATGTTGCAAAA hcaA1 2772224 - 2773585 + | large terminal subunit of phenylpropionate dioxygenase hcaA2 2773582 - 2774100 + | 3-phenylpropionate dioxygenase subunit beta hcaC 2774100 - 2774420 + | 3-phenylpropionate dioxygenase ferredoxin subunit TERM 3378 2774870 - 2774848 - g 100 -14.8 -3.59262 | overlap 2774849 TTTCACACTGTCAAA TGCCGCCAGG TAT CCTGGCGGCG GTGGCCCGCTGTACA TERM 3379 2774869 - 2774849 - g 100 -18.3 -2.75343 | overlap 2774848 TTCACACTGTCAAAT GCCGCCAGG TAT CCTGGCGGC GGTGGCCCGCTGTAC hcaB 2774417 - 2775229 + | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase TERM 3380 2775567 - 2775586 + G 76 -10.7 -3.40371 | opp_overlap 2775562 2775561 TTATAGCAATCGGCG CGGCAGC TCGACC GCTGCCG TTGCTTGATGCACTG TERM 3381 2775820 - 2775844 + G 76 -12.2 -2.65476 | gap 1, overlap 2775819 ACGCTATCTTTTACA GCGC-CACCAG CAGG CTGGTGTGCGC ATTCTGCTCAATAAT hcaD 2775239 - 2776441 + | phenylpropionate dioxygenase ferredoxin reductase subunit SSON_2625 2776812 - 2777315 + | IS1 ORF TERM 3382 2777786 - 2777751 - T 93 -11.8 -3.72695 | opp_overlap 2777753, overlap 2777753 ATCGGCGTTAGGAAA GATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATT TAATAAATTACAGCC TERM 3383 2777753 - 2777784 + T 100 -16.6 -3.794 | opp_overlap 2777751 2777753 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTAATAAATTACAG TERM 3384 2777784 - 2777753 - T 93 -14.4 -3.44848 | opp_overlap 2777753, overlap 2777751 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTAATAAATTACAG yphB 2778666 - 2777794 - | hypothetical protein yphC 2779772 - 2778678 - | putative oxidoreductase TERM 3385 2779423 - 2779413 - G 74 -8.2 -3.93985 | overlap 2779414 ACAAGAGATAGGAAA GCCG CGG CGGC AGTTCGGGCAAAAAC yphD 2780803 - 2779805 - | putative transport system permease protein TERM 3386 2780204 - 2780217 + g 70 -3.7 -4.63527 | opp_overlap 2780204, overlap 2780205 AACGGCAAAAACCGA GCGCC CGAA GGCGG TTTTTCGGCTAATGA yphE 2782339 - 2780828 - | putative ATP-binding component of a transport system TERM 3387 2781292 - 2781305 + g 70 -5.2 -4.41548 | overlap 2781279 ACCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAG yphF 2783345 - 2782362 - | putative LACI-type transcriptional regulator TERM 3388 2784843 - 2784861 + r 77 -10.2 -3.40403 | opp_overlap 2784832 ATCACGCAGCAGTTT CGCGCGCT GCA AACGCGCG TTGTCCTGACGACCA TERM 3389 2788050 - 2788067 + r 77 -11.3 -3.21747 | opp_overlap 2788050 GCAATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCACATAC TERM 3390 2788067 - 2788050 - R 89 -11.3 -4.02253 | opp_overlap 2788050 GCAATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCACATAC TERM 3391 2788197 - 2788168 - R 77 -10.7 -3.30124 | overlap 2788150 2788194 TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACAAC GAGCACATTGACAGC glyA 2789481 - 2788228 - | serine hydroxymethyltransferase TERM 3392 2790250 - 2790234 - g 72 -5.7 -4.50661 | opp_overlap 2790236, overlap 2790236 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GTTGGGAAGGTACTC hmpA 2789809 - 2790999 + | nitric oxide dioxygenase glnB 2791382 - 2791044 - | nitrogen regulatory protein P-II 1 yfhA 2792777 - 2791443 - | putative 2-component transcriptional regulator TERM 3393 2792152 - 2792142 - G 72 -8.2 -3.74251 | overlap 2792143 GACAGCGCCAGTAAA CGCG CCA CGCG CATGACCAAACAGCT TERM 3394 2792505 - 2792480 - G 76 -4 -5.01811 | gap 1, overlap 2792481 TGAGGAAACTAAAAA CGCC-CTGCTG TGTTG CAGCAACGGCA TCGGGGATAGAACCA yfhG 2793480 - 2792767 - | hypothetical protein TERM 3395 2793633 - 2793619 - R 72 -2.8 -5.01553 | opp_overlap 2793621, overlap 2793621 AACTGACAAATAAAA TAGCCT GAT AGGATA GGCTGTTAGCATTAT yfhK 2795135 - 2793645 - | putative 2-component sensor protein TERM 3396 2794275 - 2794285 + g 93 -8.2 -4.90266 | overlap 2794260 GCCCTCGCGCATACT CGCC AGT GGCG TTTTTAATTCATGAG TERM 3397 2795160 - 2795130 - G 100 -16.3 -2.91681 | opp_overlap 2795133 2795137, overlap 2795133 2795137 GGGGAAGTTCAGATA CAACAAAGCCGGG AATTA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3398 2795133 - 2795157 + g 100 -15.8 -3.32844 | opp_overlap 2795130 2795133 2795137, overlap 2795137 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3399 2795157 - 2795133 - G 100 -15.8 -3.60412 | opp_overlap 2795133 2795137, overlap 2795130 2795137 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3400 2795153 - 2795137 - R 93 -10.8 -4.42974 | opp_overlap 2795137 2795133, overlap 2795133 2795130 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3401 2795137 - 2795153 + r 90 -10.8 -4.32177 | opp_overlap 2795133 2795130 2795137, overlap 2795133 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3402 2795512 - 2795493 - R 71 -10 -3.15252 | AAATCAATCATTTAA GTGTCGCC AGAA AGCGACAC GGTAAACCACCCATT TERM 3403 2795569 - 2795552 - R 100 -8.4 -5.4492 | opp_overlap 2795552 TACAGACACAAAAAA GCTCCC GGAGTT GGGAGC TTATGATAGTGGTTG TERM 3404 2795552 - 2795569 + r 70 -9.1 -3.45737 | opp_overlap 2795552 TACAGACACAAAAAA GCTCCCG GAGT TGGGAGC TTATGATAGTGGTTG purL 2799517 - 2795630 - | phosphoribosylformylglycinamidine synthase TERM 3405 2798321 - 2798332 + g 74 -2.2 -5.14163 | overlap 2798315 CAGCTCTTCGCCGTT GTGG CTGT TCAC TTTTTCTTCATAAGT TERM 3406 2799631 - 2799620 - H 73 -4.4 -4.86731 | TGCGTGGAAATAAAA TCAC CATC GTGA ATTAGCAACGCGTGC TERM 3407 2799794 - 2799784 - H 75 -2.6 -5.1848 | opp_overlap 2799784 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG yfhD 2799913 - 2801331 + | putative transglycosylase yfhC 2801864 - 2801328 - | tRNA-specific adenosine deaminase yfhB 2802524 - 2801889 - | hypothetical protein TERM 3408 2802155 - 2802140 - G 74 -6.1 -4.46112 | overlap 2802152 GCGTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 3409 2802520 - 2802498 - G 86 -6.2 -5.16572 | overlap 2802501 2802503 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT TERM 3410 2803470 - 2803438 - g 72 -7.7 -3.94877 | ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCTCAGGGAATGTTA yfhH 2802733 - 2803581 + | putative DNA-binding transcriptional regulator TERM 3411 2803967 - 2803957 - f 76 -2.4 -5.36441 | CTCTTATACAAAAAA GTCG ATT CGCC AACATCATAGATGAT TERM 3412 2804556 - 2804581 + F 79 -2.7 -5.40072 | gap 1, opp_overlap 2804556 2804569 2804575, overlap 2804569 2804579 TTCCATGGGAATACA CAGT-CATTATA AAG TAGAATGTACTG TTTTTTTAAAGAAAA TERM 3413 2804606 - 2804575 - f 100 -14.8 -3.65986 | opp_overlap 2804556 2804569 2804579, overlap 2804556 2804569 CATTATAAAGTAGAA TGTACTGTTTTTTT AAAG AAAAAAACAGTACA TTGAGATATGATTTG ipaH_5 2804968 - 2806794 + | invasion plasmid antigen TERM 3414 2806859 - 2806836 - T 93 -10.2 -4.58395 | opp_overlap 2806848 2806849, overlap 2806838 CTGACTCCGGAAAAA CAGAGGCCCG CCCC CGGGCCTCCC CGGATTCATCCGTTT TERM 3415 2806857 - 2806838 - T 100 -15 -3.90762 | opp_overlap 2806848 2806849, overlap 2806836 GACTCCGGAAAAACA GAGGCCCG CCCC CGGGCCTC CCCGGATTCATCCGT SSON_2647 2807597 - 2806974 - | hypothetical protein SSON_2648 2808714 - 2807548 - | putative tail fiber protein SSON_2649 2809232 - 2808774 - | putative protein encoded within IS TERM 3416 2809232 - 2809255 + r 72 -9 -3.48276 | gap 1, opp_overlap 2809235, overlap 2809235 AAGAGATGTCGTTCA TAAGCCCG-TA TTT TACCGGGCTTA TTCTGTGACAACCAG SSON_2650 2809629 - 2809282 - | putative protein encoded within IS SSON_2651 2810581 - 2809868 - | IS600 ORF2 SSON_2652 2811024 - 2810722 - | IS600 ORF1 TERM 3417 2811305 - 2811315 + r 71 -6.8 -4.14541 | overlap 2811303 2811308 CCCACTACTTATTTG GTGG ACA CCAC TTTGTCTAATTCGTC SSON_2653 2812748 - 2811621 - | putative transposase TERM 3418 2811803 - 2811823 + g 100 -5.3 -5.47159 | overlap 2811783 2811780 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG TERM 3419 2812965 - 2812978 + r 70 -5.3 -4.50993 | CGCCAGACGTAGCAC TTCAC GCCA GTGAA TTTCTATTTCTTTCA SSON_2654 2813770 - 2813123 - | IS629 ORF2 TERM 3420 2813690 - 2813702 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SSON_2655 2814331 - 2813990 - | IS629 ORF1 yfdA 2814429 - 2814689 + | hypothetical protein TERM 3421 2814820 - 2814808 - g 70 -10.5 -2.83403 | overlap 2814807 GGTGCTGGAGCAAAG CGGGG AAG CCCCG GTCTACGGGCCAAAC SSON_2657 2814686 - 2815276 + | hypothetical protein SSON_2658 2815643 - 2815296 - | hypothetical protein TERM 3422 2815559 - 2815590 + g 81 -6.4 -4.81551 | opp_overlap 2815562 2815564, overlap 2815562 GCCAGAGAATACGCA GAAGAGGAGGGGCA TAAT TGCTCCGCCACATC TTTTTGCTGTCCATC SSON_2659 2815829 - 2816107 + | putative immunity protein for colicin IA TERM 3423 2816083 - 2816122 + F 100 -9.6 -4.90778 | gap 1, opp_overlap 2816091 2816107, overlap 2816089 2816091 TATTCTTTCTGTTAT TATAA-AAAGGCTGTCTGT AAG ATAGACAGCCTGTCTTATA TTTTATTTAAATACC TERM 3424 2816089 - 2816115 + F 79 -10.2 -3.63424 | opp_overlap 2816091 2816107, overlap 2816083 2816091 TTCTGTTATTATAAA AAGGCTGTCTGT AAG ATAGACAGCCTG TCTTATATTTTATTT TERM 3425 2816091 - 2816113 + F 85 -12.8 -3.35613 | opp_overlap 2816091 2816107, overlap 2816089 2816083 CTGTTATTATAAAAA GGCTGTCTGT AAG ATAGACAGCC TGTCTTATATTTTAT TERM 3426 2816113 - 2816091 - f 100 -10.6 -4.91109 | opp_overlap 2816091 2816089 2816083, overlap 2816107 CTGTTATTATAAAAA GGCTGTCTGT AAG ATAGACAGCC TGTCTTATATTTTAT SSON_2660 2817646 - 2818551 + | insertion element IS2 transposase InsD TERM 3427 2818697 - 2818681 - f 75 -6.5 -4.55287 | opp_overlap 2818681 TTGAGGGAGAGAAAA CGTGTCA TTT TGACCCG TTCGGTATTCAGAAC SSON_2661 2819082 - 2819648 + | Rep protein TERM 3428 2820540 - 2820524 - g 93 -2.1 -5.72207 | overlap 2820525 2820528 CCTAAAGGAAAAAAA TCCACTG CAC CTGTGGT ACAAGAAGCTCTGCG cjrA 2819939 - 2820856 + | putative iron-regulated protein cjrB 2821089 - 2821640 + | colicin Js-sensitive putative membrane protein cjrC 2821809 - 2824070 + | colicin Js-sensitive receptor protein TERM 3429 2824151 - 2824140 - g 74 -3 -4.90266 | opp_overlap 2824140 TGCAGGAACGAAAAA TGAA TATT TTCA CTTTATCCAAAGCAC TERM 3430 2824339 - 2824321 - g 71 -3 -4.74801 | opp_overlap 2824285 TAATGCCAGTAAAAA GGTGTTTG CAG CAGTCACC GATCGTGTAAATCGT TERM 3431 2824805 - 2824791 - g 77 -2.8 -5.1675 | overlap 2824804 CGATGGATGAAAAAA CACAGA AAA TCTACG TTGGCGGAAGAGATT senB 2824139 - 2825314 + | putative enterotoxin TERM 3432 2825516 - 2825543 + T 80 -7.1 -4.7153 | gap 1, overlap 2825519 CACAGCTATGCCTGT TCATGGGGTTCT AGGCC GGAACCCCA-GA TTTTTCCGATTGTTT SSON_2666 2827730 - 2826339 - | putative protein encoded within IS TERM 3433 2827877 - 2827900 + r 72 -9 -3.48276 | gap 1, opp_overlap 2827880, overlap 2827880 AAGAGATGTCGTTCA TAAGCCCG-TA TTT TACCGGGCTTA TTCTGTGACAACCAG SSON_2667 2828274 - 2827927 - | putative protein encoded within IS TERM 3434 2828683 - 2828693 + H 71 -6.8 -4.14541 | overlap 2828681 2828686 CCCACTACTTATTTG GTGG ACA CCAC TTTGTCTAATTCGTC SSON_2668 2828986 - 2829489 + | IS1 ORF SSON_2669 2830954 - 2829779 - | putative transposase TERM 3435 2829961 - 2829981 + g 100 -5.3 -5.47159 | overlap 2829941 2829938 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG SSON_2670 2831037 - 2831339 + | IS600 ORF1 SSON_2671 2831480 - 2832193 + | IS600 ORF2 TERM 3436 2832460 - 2832444 - T 75 -2.9 -5.1615 | overlap 2832445 TTAATACGGAAAAAA CTCTGTG CTA CTCAGAA CTGTCCGGTCATACT TERM 3437 2832518 - 2832551 + T 91 -7.5 -5.26875 | gap 1, overlap 2832519 TCTCATAAACTCCTT TCAGCCTTC-TGACTC CTG GAGTAATGAAGGCTGC TTTTTTCGTTACACC TERM 3438 2832519 - 2832550 + T 86 -11 -3.75402 | gap 1, overlap 2832518 CTCATAAACTCCTTT CAGCCTTC-TGACTC CTG GAGTAATGAAGGCTG CTTTTTTCGTTACAC TERM 3439 2832876 - 2832895 + T 100 -8.6 -6.28967 | gap 1 AAGCCTTATTTCCCT GCCTCC-TC TCT GATGGAGGC TTTTTTTTATTTCTC finO 2833462 - 2832902 - | conjugal transfer fertility inhibition protein FinO TERM 3440 2833091 - 2833105 + g 95 -7 -5.24129 | overlap 2833093 ACGGGTGATGGCCTT CAGCGC CCT GCGCAG TTTTTTATGCGAGAG TERM 3441 2833830 - 2833815 - R 74 -8.2 -3.85698 | opp_overlap 2833826, overlap 2833826 CTGGTGCCGGACAAA GGCCCC CAAC AGGGCC ATCAGAAGAATGGCC TERM 3442 2834289 - 2834300 + r 71 -3.6 -4.84918 | TCTTCCTGTATCAGT CTCC GCCC GGGG TTTTCTCTTTCTGCA SSON_2674 2835486 - 2834284 - | hypothetical protein TERM 3443 2834340 - 2834365 + g 100 -13.4 -4.07568 | CCATATCCCGCTCCA TCTGCTGCAG ACGCTC CTGCAGCAGA TTTTCCCGGGCAACC trbI 2835971 - 2835585 - | conjugal transfer protein TrbI SSON_2676 2837239 - 2835968 - | hypothetical protein traL 2837735 - 2837424 - | conjugal transfer pilus assembly protein TraL traA 2838031 - 2837750 - | conjugal transfer pilin subunit TraA SSON_2679 2839033 - 2838146 - | IS629 ORF2 TERM 3444 2838713 - 2838725 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SSON_2680 2839359 - 2839033 - | IS629 ORF1 SSON_2681 2840537 - 2839740 - | IS21 ORF2 SSON_2682 2841709 - 2840537 - | IS21 ORF1 TERM 3445 2840867 - 2840887 + g 77 -9.7 -3.59979 | overlap 2840863 2840871 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 3446 2840871 - 2840883 + g 75 -6.9 -4.44046 | overlap 2840863 2840867 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC TERM 3447 2841906 - 2841892 - g 74 -10 -3.44284 | opp_overlap 2841891 2841892, overlap 2841890 TTTTGACGAAGAAGA CGCAGA AGT TCTGCG CTTTGATAGTTTTGA SSON_2683 2841854 - 2842150 + | putative protein encoded within IS TERM 3448 2842562 - 2842547 - g 73 -9 -3.63805 | ATGTGATACTGGAAA TCTGCC ATCA GGCAGA TGTGGAGCCGGGGAT SSON_2684 2842150 - 2843337 + | IS91 orf SSON_2685 2844712 - 2843510 - | hypothetical protein TERM 3449 2843618 - 2843638 + g 81 -11.2 -3.64488 | overlap 2843616 ATGTTTTATTCCTTT TACAGCCC CGTCC GGGCTGTA TGTTTTCACCAGCTT TERM 3450 2843744 - 2843801 + g 100 -13.6 -4.91977 | gap 2, opp_overlap 2843765 AACTGAATCACGCCA GGCTTTCTGCTCGTCGATAATCCGCCGG ATCT CAGGC-G-TTATCGGCAGGCGGAAAGCC TTTTGTGTTTTCATA TERM 3451 2844424 - 2844443 + g 78 -5.7 -4.81249 | gap 1 CCAGCTGGATAGCGA GCTCCGGC CACTC GCCG-AGC TTTTTACCTTTGAGG TERM 3452 2844521 - 2844532 + g 79 -4.4 -4.93696 | GCTGAAATCGATACG GAGA TAGT TCTC TTTTTCGTATTTGGA yfhL 2844927 - 2845187 + | hypothetical protein TERM 3453 2845184 - 2845214 + T 76 -9.3 -3.71284 | opp_overlap 2845184 2845183 CCACGCGGATAAAAT TTAATATTCTACT CTGGA AGTAGAGTATTAA TTATATTACTGGGAA TERM 3454 2845361 - 2845332 - T 100 -13.6 -3.78022 | opp_overlap 2845332 TTTATAGTTATTAAA GGCGCGTCCGAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT TERM 3455 2845623 - 2845659 + T 95 -10.9 -4.56597 | opp_overlap 2845623, overlap 2845629 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3456 2845659 - 2845623 - T 100 -11.6 -4.83759 | opp_overlap 2845623 2845629 AATTAAAGTTAAAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTTTAAAGAGAACG TERM 3457 2845629 - 2845653 + T 73 -4.1 -4.77757 | opp_overlap 2845623, overlap 2845623 AGTTAAAAAGTAAAA CCCCCGTTC CTTACCA GTTCGGGGG TTTTACTTTTTAAAG acpS 2846063 - 2845683 - | 4'-phosphopantetheinyl transferase TERM 3458 2845921 - 2845939 + g 74 -8.1 -4.14392 | opp_overlap 2845921 CGCTTCGCCAGAAAA CGCACCG GCTGG TGGTGCG TTTTCCAGATTGCCC TERM 3459 2845939 - 2845921 - G 78 -7.4 -4.36914 | opp_overlap 2845921 CGCTTCGCCAGAAAA CGCACC GGCTGGT GGTGCG TTTTCCAGATTGCCC pdxJ 2846794 - 2846063 - | pyridoxal phosphate biosynthetic protein PdxJ recO 2847534 - 2846806 - | DNA repair protein RecO TERM 3460 2846957 - 2846967 + g 72 -6.8 -4.21275 | overlap 2846939 2846938 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2848451 - 2847546 - | GTP-binding protein Era TERM 3461 2847890 - 2847880 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC TERM 3462 2848359 - 2848370 + g 70 -5.8 -4.16284 | GGTGATGGAGATCTT CTGC CCCA GCAG TTTGTTCAACAATGT rnc 2849128 - 2848448 - | ribonuclease III TERM 3463 2849387 - 2849355 - R 100 -21.5 -4.07877 | opp_overlap 2849343 TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGGCTATT lepB 2850375 - 2849401 - | lsignal peptidase I TERM 3464 2849937 - 2849953 + g 76 -9.5 -3.76373 | overlap 2849915 GTAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2852190 - 2850391 - | GTP-binding protein LepA TERM 3465 2850489 - 2850502 + g 74 -2.3 -5.07486 | overlap 2850487 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGGCTG TERM 3466 2852395 - 2852378 - R 91 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2852867 - 2852388 - | SoxR reducing system protein RseC rseB 2853820 - 2852864 - | periplasmic negative regulator of sigmaE TERM 3467 2853761 - 2853734 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 2854470 - 2853820 - | anti-RNA polymerase sigma factor SigE TERM 3468 2854196 - 2854208 + g 78 -7.7 -4.43189 | opp_overlap 2854204, overlap 2854204 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTGTGCCATTGAT rpoE 2855078 - 2854503 - | RNA polymerase sigma factor RpoE TERM 3469 2855509 - 2855487 - H 77 -3.5 -5.20222 | opp_overlap 2855508 ATTAAACAAAGAAAA TGAATACTC TCCCT GAACATTCA TGTGACGTGTTGATT TERM 3470 2855633 - 2855653 + H 76 -8.9 -3.73775 | overlap 2855636 TCAACATTTTATGCC CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACTGAC SSON_2699 2856250 - 2856552 + | IS600 ORF1 SSON_2700 2856693 - 2857406 + | IS600 ORF2 TERM 3471 2857984 - 2858002 + T 73 -11 -2.52676 | opp_overlap 2857972 2857970 2857969 2857977 TCACCAGACGTATGC CTGATGCC CAC GGCGTCAG TACGTTACCACCGTG TERM 3472 2858392 - 2858379 - T 75 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA yfiC 2859217 - 2858360 - | putative enzyme TERM 3473 2858476 - 2858450 - G 88 -12.4 -3.58269 | overlap 2858474 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 3474 2859135 - 2859122 - G 77 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 3475 2859666 - 2859655 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT srmB 2859229 - 2860563 + | ATP-dependent RNA helicase SrmB TERM 3476 2860746 - 2860765 + T 70 -4.9 -4.52873 | opp_overlap 2860746, overlap 2860743 TGTCGACAAGTTAAA TGCCGGG TTTAAT CCCGACA TTATTTTTATCCAGC yfiE 2861698 - 2860772 - | putative transcriptional regulator LYSR-type TERM 3477 2861239 - 2861222 - G 75 -6.9 -4.4009 | opp_overlap 2861221, overlap 2861225 CCCTACGCGATAAAA GACGCCG ACAT CGGCCTC ATCATTCAGTAGCGC TERM 3478 2861309 - 2861295 - G 70 -7.1 -4.0616 | GACTGCAACGATAAA CGCAC TTTTG GTGCG CGTTGCCGAAAACGC TERM 3479 2861567 - 2861581 + g 70 -5 -4.57569 | AAAAGTCACCGTCGA TTGTGT ACA GCACAA TTTTTGCGAAGCTCG TERM 3480 2861602 - 2861582 - G 82 -11.3 -3.46602 | TTGTGTACAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC yfiK 2861756 - 2862343 + | neutral amino-acid efflux protein TERM 3481 2862320 - 2862332 + T 72 -4.8 -4.66537 | CTGTTACTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAACGAA TERM 3482 2862376 - 2862353 - T 100 -16.8 -5.65513 | opp_overlap 2862345 2862353 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 3483 2862353 - 2862376 + T 100 -16.8 -3.22884 | opp_overlap 2862353, overlap 2862345 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC yfiD 2862782 - 2862399 - | autonomous glycyl radical cofactor GrcA TERM 3484 2862926 - 2862910 - H 77 -3.7 -5.24551 | TTAAATCAATAAAAA CCACA CATCGAT TGTGG TCGTAAATGGATTTT TERM 3485 2863549 - 2863566 + G 100 -9.1 -5.18726 | opp_overlap 2863545 2863548 AGCCTGATTAACCAG CACCGCG AAGG CGTGGTG TTTTTGTTGTGGGGA ung 2863087 - 2863776 + | uracil-DNA glycosylase TERM 3486 2863817 - 2863790 - T 90 -13.4 -3.5394 | opp_overlap 2863788 2863791 2863814 2863816, overlap 2863791 AAATTTGCGGGGAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 3487 2863791 - 2863816 + T 88 -14.7 -3.0169 | opp_overlap 2863791 2863790, overlap 2863788 2863814 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 3488 2863816 - 2863791 - T 95 -16.9 -2.72043 | opp_overlap 2863788 2863791 2863814, overlap 2863790 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT yfiF 2864861 - 2863824 - | putative methyltransferase TERM 3489 2864508 - 2864520 + g 74 -7.7 -4.11216 | opp_overlap 2864507 ACGGCTCTGGAACAG TGCCT GAC AGGCA TTTTCGCCGTAGACG TERM 3490 2864660 - 2864648 - G 71 -9.1 -3.53012 | opp_overlap 2864628 CCGGCGCGCGGGAAA CCGTG CGC CACGG CGAATCTTCCCACTT trxC 2865068 - 2865487 + | thioredoxin 2 TERM 3491 2865494 - 2865514 + F 95 -11.1 -4.50976 | TCTCTTTAATCTTAC CGGGGTGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 3492 2865527 - 2865537 + F 70 -2.4 -5.02476 | overlap 2865535 CCGTTTTCTCCTCTG CGAC AAT GGCG TTTTTTCGACGCTCT TERM 3493 2865589 - 2865614 + G 70 -3.9 -4.63218 | overlap 2865592 CTCCAGTTACGCGCC GAGCGTATTGC GCGC GCAACACGTCC TTTTCTTGCCCGCGG TERM 3494 2865769 - 2865753 - g 72 -10.1 -3.3782 | opp_overlap 2865752 2865750 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA yfiP 2865532 - 2866254 + | hypothetical protein TERM 3495 2866696 - 2866738 + G 70 -5.5 -4.42806 | overlap 2866681 2866692 CTGGCAAGGTCTGAA TGCCAGCTTTTCGCCTGTG CCGAT TAAACGCGGCAAGCTGGCG TTTATTTCACAATCG TERM 3496 2867977 - 2867967 - g 77 -6.8 -4.58395 | overlap 2867968 2867969 TCGATCGCGTAAAAA TGGC CTG GCCA CAGGCGCGGGTCCAC yfiQ 2866286 - 2868946 + | hypothetical protein pssA 2869057 - 2870415 + | phosphatidylserine synthase TERM 3497 2870422 - 2870438 + F 100 -9.4 -5.04249 | opp_overlap 2870422 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 3498 2870438 - 2870422 - f 72 -9.4 -3.51032 | opp_overlap 2870422 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG yfiM 2870512 - 2870784 + | hypothetical protein kgtP 2872079 - 2870781 - | alpha-ketoglutarate transporter TERM 3499 2872388 - 2872369 - R 100 -13.6 -4.74103 | opp_overlap 2872369 GCGCCAATGCAAAAA GGCCATCC GTCA GGATGGCC TTTCGCTTAATTTGA TERM 3500 2872369 - 2872388 + r 100 -13.6 -3.83214 | opp_overlap 2872369 GCGCCAATGCAAAAA GGCCATCC GTCA GGATGGCC TTTCGCTTAATTTGA TERM 3501 2872535 - 2872556 + r 74 -8.7 -3.91196 | opp_overlap 2872526 GCAAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 3502 2875023 - 2875035 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3503 2875577 - 2875601 + r 71 -8 -3.93061 | gap 1, opp_overlap 2875583 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 3504 2875803 - 2875816 + r 75 -6.7 -4.41177 | overlap 2875768 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 3505 2877662 - 2877684 + r 76 -9 -3.72051 | opp_overlap 2877664, overlap 2877664 2877678 CGGAATTCTCAGGAG AACCCCGCCG ACC CGGCGGCGTG TTTGCCGTTGTTCCG TERM 3506 2877682 - 2877664 - R 82 -11.6 -3.41527 | opp_overlap 2877662 2877664 2877678 GAATTCTCAGGAGAA CCCCGCCG ACC CGGCGGCG TGTTTGCCGTTGTTC TERM 3507 2877664 - 2877682 + r 82 -11.6 -3.43751 | opp_overlap 2877664, overlap 2877662 2877678 GAATTCTCAGGAGAA CCCCGCCG ACC CGGCGGCG TGTTTGCCGTTGTTC TERM 3508 2877826 - 2877852 + r 84 -13.8 -2.77899 | opp_overlap 2877803 2877831, overlap 2877831 GTCTAACTTATAGAC AAAAACGAGCCC GAA GGGCTCGTTTTA TCATTACTGGACAGC TERM 3509 2877847 - 2877831 - R 100 -13.7 -5.04597 | opp_overlap 2877826 2877831, overlap 2877803 ACTTATAGACAAAAA CGAGCCC GAA GGGCTCG TTTTATCATTACTGG TERM 3510 2877831 - 2877847 + r 100 -13.7 -4.56607 | opp_overlap 2877803 2877831, overlap 2877826 ACTTATAGACAAAAA CGAGCCC GAA GGGCTCG TTTTATCATTACTGG clpB 2880429 - 2877856 - | protein disaggregation chaperone TERM 3511 2879625 - 2879605 - G 72 -7.5 -3.86822 | opp_overlap 2879605 TAATTCGTCGATAAA CAGGATGAC GTT GCCTTCCTG TTTGGCAAGATCGTT yfiH 2881290 - 2880559 - | hypothetical protein rluD 2882267 - 2881287 - | 23S rRNA pseudouridine synthase D TERM 3512 2882302 - 2882312 + H 74 -8.2 -3.8766 | ATCGTTGGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC SSON_2721 2882402 - 2883139 + | outer membrane protein assembly complex subunit YfiO TERM 3513 2883253 - 2883228 - f 72 -9.1 -3.61398 | opp_overlap 2883228 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 3514 2883228 - 2883253 + F 100 -9.8 -5.61596 | opp_overlap 2883228 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_2722 2883243 - 2884589 + | IS4 orf TERM 3515 2884600 - 2884571 - f 89 -9.3 -4.59109 | opp_overlap 2884572, overlap 2884573 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TAGTCCCGGTGGTGA TERM 3516 2884572 - 2884599 + F 81 -12.8 -3.15861 | opp_overlap 2884571 2884573 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTAGTCCCGGTGGTG TERM 3517 2884598 - 2884573 - f 100 -16.3 -3.90762 | opp_overlap 2884572, overlap 2884571 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAGTCCCGGTGGT TERM 3518 2885026 - 2885007 - g 95 -13.6 -3.33261 | opp_overlap 2885007 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG TERM 3519 2885007 - 2885026 + G 100 -13.6 -4.21607 | opp_overlap 2885007 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG SSON_2723 2884693 - 2885055 + | putative prohead protease SSON_2724 2885117 - 2885419 + | IS600 ORF1 SSON_2725 2885560 - 2886273 + | IS600 ORF2 SSON_2726 2886336 - 2887832 + | putative sheath protein SSON_2727 2887832 - 2888188 + | hypothetical protein TERM 3520 2888438 - 2888450 + G 91 -5.5 -5.41143 | overlap 2888439 TTTTTAAGACCAGCA TGCAG ATC CTGCG TTTTTTTACCCAGTC SSON_2728 2888188 - 2888523 + | hypothetical protein TERM 3521 2889344 - 2889334 - g 79 -2.4 -5.28826 | AAATCGCAGAAAAAA GTGC TCC GCTC GTTGCGCATTAGCCC SSON_2729 2888608 - 2890557 + | putative tail protein SSON_2730 2890984 - 2891487 + | IS1 ORF TERM 3522 2891893 - 2891909 + F 100 -10.1 -5.67063 | opp_overlap 2891893 2891892 TGATTAATATATAAG CCGCCAG AAA TTGGCGG TTTTTTTATAGTGGA TERM 3523 2892810 - 2892786 - g 81 -7.1 -4.68593 | opp_overlap 2892788, overlap 2892797 GTTATCAGGCAAAAA CAGCAGACAAA CCT TGTGGCTGCTG TCATCCGGACGACGG SSON_2731 2891931 - 2893322 + | tail/DNA circulation protein SSON_2732 2893319 - 2894401 + | putative tail protein TERM 3524 2894752 - 2894738 - g 91 -9.2 -4.63542 | opp_overlap 2894737 2894738 CATAATTTTTAAAAA CGCGCC TAA AGCGCG CTTTGAAATGCCAGT SSON_2733 2894379 - 2894912 + | putative baseplate assembly protein SSON_2734 2894918 - 2895328 + | putative tail protein TERM 3525 2895325 - 2895335 + GT 70 -5.4 -4.36914 | opp_overlap 2895317, overlap 2895322 GAGTGAACTGAATGG CTGA CAG TCAG TTTTATCGCCCCGGC SSON_2736 2896433 - 2895930 - | IS1 ORF SSON_2735 2895321 - 2895995 + | putative head assembly protein TERM 3526 2896927 - 2896914 - g 80 -5.3 -4.96848 | GGTGCCACAGAAAAA GTCAT CCCG ATGAC GATTGCATTATCGAA SSON_2737 2896788 - 2897180 + | putative tail protein TERM 3527 2897460 - 2897450 - g 75 -6.8 -4.4078 | CGTCTTGAAGCAAAA GCCA ATG TGGC TGGTGGCATAAATGA SSON_2738 2897180 - 2897770 + | putative tail protein SSON_2739 2897757 - 2898797 + | putative tail fiber protein SSON_2740 2898950 - 2899345 + | putative tail fiber assembly protein TERM 3528 2899327 - 2899345 + F 73 -7.4 -4.13995 | overlap 2899330 TGAATGGTCCGTCTC TCCGGAAG GTT CTTCCTGA TTTAATTTATCGCGA SSON_2741 2899471 - 2900637 + | putative tail fiber protein SSON_2742 2900588 - 2901211 + | hypothetical protein TERM 3529 2901290 - 2901257 - T 77 -11.9 -2.8474 | opp_overlap 2901262, overlap 2901262 CCTTATTTACAACTA GAAAAGCCTCTGACT TCAT AATCAGAGGCTTTTT TGAAATGCACGTGCA TERM 3530 2901285 - 2901262 - T 100 -11.8 -4.58466 | opp_overlap 2901262, overlap 2901257 TTTACAACTAGAAAA GCCTCTGACT TCAT AATCAGAGGC TTTTTTGAAATGCAC TERM 3531 2901262 - 2901285 + T 100 -9.6 -5.0538 | opp_overlap 2901257 2901262 TTTACAACTAGAAAA GCCTCTGACT TCAT AATCAGAGGC TTTTTTGAAATGCAC TERM 3532 2901673 - 2901688 + T 72 -3.2 -5.08011 | overlap 2901675 GCTAAAGCGTAGTTT TCGTCG TTTG CGACTA TTTTTTGCGGCTTTT smpB 2902469 - 2901987 - | SsrA-binding protein TERM 3533 2902078 - 2902090 + g 70 -5.5 -4.35524 | TGCTGTTTTTTACCT TTGGC GAC GCCGA TTTTCACTTTGCACC SSON_2744 2902601 - 2903077 + | hypothetical protein TERM 3534 2903241 - 2903223 - g 74 -3 -4.96773 | overlap 2903225 TTAACTAAAAACAAA GTCGGC ATTTACA GCCGTC CGGCAAAACTAAGCG SSON_2745 2903067 - 2903357 + | hypothetical protein TERM 3535 2903436 - 2903461 + F 100 -9.8 -5.61596 | opp_overlap 2903436 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3536 2903461 - 2903436 - f 72 -9.1 -3.61398 | opp_overlap 2903436 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_2746 2903451 - 2904797 + | IS4 orf TERM 3537 2904808 - 2904779 - f 89 -9.3 -4.59109 | overlap 2904781 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCCCTTGAGCT TERM 3538 2904806 - 2904781 - f 100 -16.3 -3.90762 | overlap 2904779 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCCCTTGAG SSON_2747 2904817 - 2905023 + | hypothetical protein TERM 3539 2905352 - 2905319 - g 72 -6.7 -4.1822 | gap 1, overlap 2905320 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG yfiA 2905058 - 2905399 + | translation inhibitor protein RaiA TERM 3540 2905425 - 2905440 + F 100 -11.8 -5.4505 | TGAGTGGATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC pheL 2905503 - 2905550 + | leader peptide of chorismate mutase-P-prephenate dehydratase TERM 3541 2905599 - 2905619 + F 100 -11.8 -5.5112 | opp_overlap 2905599 2905611 GAAGACGAACAATAA GGCCTCCC AAACC GGGGGGCC TTTTTTATTGATAAC TERM 3542 2905619 - 2905599 - f 87 -10.3 -4.03167 | opp_overlap 2905599, overlap 2905611 GAAGACGAACAATAA GGCCTCCCA AAC CGGGGGGCC TTTTTTATTGATAAC pheA 2905650 - 2906810 + | bifunctional chorismate mutase/prephenate dehydratase TERM 3543 2906815 - 2906848 + T 72 -10.3 -2.83073 | opp_overlap 2906817 2906818, overlap 2906814 2906811 2906818 ATCCAACCTGATGAA AAGGTGCCGGATGAT GTGA ATCATCCGGCACTGG ATTATTACTGGCGGT TERM 3544 2906846 - 2906817 - T 100 -15.1 -4.28361 | opp_overlap 2906815 2906814 2906811 2906818, overlap 2906818 CCAACCTGATGAAAA GGTGCCGGATGAT GTGA ATCATCCGGCACT GGATTATTACTGGCG TERM 3545 2906818 - 2906845 + T 100 -18.6 -2.67428 | opp_overlap 2906817 2906818, overlap 2906815 2906814 2906811 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC TERM 3546 2906845 - 2906818 - T 100 -18.6 -3.16534 | opp_overlap 2906818 2906815 2906814 2906811, overlap 2906817 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC tyrA 2907974 - 2906853 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 3547 2907148 - 2907162 + g 71 -2.8 -4.77165 | GAGAGCGCCAGAAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGA aroF 2909055 - 2907985 - | phospho-2-dehydro-3-deoxyheptonate aldolase yfiL 2909264 - 2909641 + | hypothetical protein SSON_2754 2909869 - 2910372 + | IS1 ORF SSON_2755 2910556 - 2911074 + | hypothetical protein SSON_2756 2911887 - 2911174 - | IS600 ORF2 SSON_2757 2912330 - 2912028 - | IS600 ORF1 SSON_2758 2912585 - 2912382 - | IS600 ORF1 TERM 3548 2912777 - 2912741 - H 95 -7.9 -5.42259 | opp_overlap 2912742, overlap 2912742 GTACGCGCAAAAAAA CCTGGCACTGACAGCAG CAA CAATTGTCAGCGCCAGT GATATAAGACGGTAA TERM 3549 2912776 - 2912742 - H 87 -11.4 -3.84633 | opp_overlap 2912742, overlap 2912741 TACGCGCAAAAAAAC CTGGCACTGACAGCAG CAA CAATTGTCAGCGCCAG TGATATAAGACGGTA TERM 3550 2913708 - 2913688 - g 77 -9.7 -3.59979 | overlap 2913692 2913702 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 3551 2913704 - 2913692 - g 75 -6.9 -4.44046 | overlap 2913688 2913702 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_2759 2912866 - 2914038 + | IS21 ORF1 SSON_2760 2914038 - 2914835 + | IS21 ORF2 yfiN 2914897 - 2915946 + | hypothetical protein yfiB 2915962 - 2916444 + | putative outer membrane lipoprotein TERM 3552 2916490 - 2916469 - T 100 -11.5 -5.82281 | opp_overlap 2916469 2916487 2916489 AAACAGACAAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 2916868 - 2916521 - | 50S ribosomal protein L19 trmD 2917677 - 2916910 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2918256 - 2917708 - | 16S rRNA-processing protein rpsP 2918523 - 2918275 - | 30S ribosomal protein S16 TERM 3553 2918579 - 2918547 - R 89 -9.2 -4.63218 | gap 1, opp_overlap 2918550, overlap 2918550 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 3554 2918577 - 2918550 - R 100 -12 -4.43307 | opp_overlap 2918550, overlap 2918547 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 2920133 - 2918772 - | signal recognition particle protein TERM 3555 2920394 - 2920380 - g 85 -2.7 -5.40072 | overlap 2920382 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC SSON_2768 2920225 - 2921091 + | hypothetical protein yfjD 2921202 - 2922398 + | hypothetical protein TERM 3556 2922401 - 2922434 + T 75 -9.5 -3.61398 | opp_overlap 2922405, overlap 2922402 2922405 TGTGGCGGAGTAACG AAAACGGCCCTGCAT TCGC ATGCAGGGCCGTGAA TTATTACGAAAACAG TERM 3557 2922402 - 2922433 + T 82 -13 -2.76696 | opp_overlap 2922405, overlap 2922401 2922405 GTGGCGGAGTAACGA AAACGGCCCTGCAT TCGC ATGCAGGGCCGTGA ATTATTACGAAAACA TERM 3558 2922430 - 2922405 - T 100 -19.1 -4.45544 | opp_overlap 2922405 2922402 2922401 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA TERM 3559 2922405 - 2922430 + T 100 -19.1 -2.6563 | opp_overlap 2922405, overlap 2922402 2922401 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGAATTATTACGAAA grpE 2923046 - 2922453 - | heat shock protein GrpE ppnK 2923169 - 2924047 + | inorganic polyphosphate/ATP-NAD kinase recN 2924133 - 2925794 + | recombination and repair protein smpA 2925943 - 2926284 + | hypothetical protein TERM 3560 2926332 - 2926361 + T 89 -9.3 -4.59109 | opp_overlap 2926333, overlap 2926334 GTGCTCAATGAGCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3561 2926360 - 2926333 - T 81 -12.8 -3.13164 | opp_overlap 2926332 2926334 TGCTCAATGAGCTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 3562 2926334 - 2926359 + T 100 -16.3 -3.90762 | opp_overlap 2926333, overlap 2926332 GCTCAATGAGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_2774 2926666 - 2926343 - | IS4 orf SSON_2776 2929025 - 2927883 - | IS4 orf SSON_2775 2927053 - 2927958 + | insertion element IS2 transposase InsD TERM 3563 2929040 - 2929015 - GT 100 -9.8 -5.61596 | opp_overlap 2929015 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3564 2929015 - 2929040 + gT 73 -9.1 -3.61398 | opp_overlap 2929015 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC SSON_2777 2930319 - 2929075 - | putative portal protein ymfR 2930413 - 2930231 - | hypothetical protein ymfN 2932158 - 2930425 - | hypothetical protein TERM 3565 2931163 - 2931180 + g 77 -2.7 -5.07652 | gap 1 CGCCGAACGCGCCGA CACC-CAG ATA TTGAGGTG TTTTGTTTTAAAGAC TERM 3566 2931265 - 2931282 + g 72 -5.6 -4.57073 | GCGATAAACCGACAC GCCAAT ATTTGG ATTGGC TTTTTCCAGCACCTG SSON_2780 2932649 - 2932155 - | hypothetical protein TERM 3567 2932272 - 2932283 + g 74 -2.2 -5.03314 | CGTGCTGCTCATCTC GGAC TCCT GTTC TTTTTTGGCGGTCAG TERM 3568 2932340 - 2932359 + g 70 -4.3 -4.56775 | overlap 2932342 TTGCACCGGTGATGG TGTTGCC CTGTAT GGCAATA TTTTTCACGGCACGT SSON_2781 2933121 - 2932771 - | putative DNase ybcT 2933628 - 2933164 - | endopeptidase-like protein ybcS 2934122 - 2933625 - | lysozyme-like protein SSON_2784 2934337 - 2934122 - | lysis protein S TERM 3569 2934279 - 2934269 - G 72 -4.6 -4.64598 | opp_overlap 2934270 2934272 2934276 2934278, overlap 2934257 2934270 2934272 2934273 CAACCACTGCAAAAA CCAG TAG CCGG CACTGCCGGCGGAGG TERM 3570 2934270 - 2934318 + g 74 -2.2 -5.13473 | opp_overlap 2934257 2934269 2934270 2934272 2934273, overlap 2934272 2934276 2934278 AACCACTGCAAAAAC CAGTAGCCGGCACTGCCGGCGG AGGTG CCGTAGGCAATGCCTGTTGATA TTTTTTCCATCTGAT TERM 3571 2934276 - 2934312 + g 77 -10 -3.66995 | opp_overlap 2934269 2934270 2934273 2934272, overlap 2934272 2934270 2934278 TGCAAAAACCAGTAG CCGGCACTGCCGGCGG AGGTG CCGTAGGCAATGCCTG TTGATATTTTTTCCA TERM 3572 2934278 - 2934310 + g 76 -11.2 -3.39574 | opp_overlap 2934269 2934270 2934273 2934272, overlap 2934276 2934272 2934270 CAAAAACCAGTAGCC GGCACTGCCGGCGG AGGTG CCGTAGGCAATGCC TGTTGATATTTTTTC TERM 3573 2934403 - 2934379 - R 100 -11.5 -5.64421 | ATCGGAAAGAAAAAA GGCCATCAG CAAAACT CTGATGGCC TGAATCACCTTTACC TERM 3574 2934583 - 2934606 + r 72 -6.6 -4.2711 | overlap 2934584 GGTCCTTTTTTCTAC GGTCCTCCTC CCCG GAGGGGGGCA TTTCATTATTTTTCT TERM 3575 2934584 - 2934605 + r 71 -10.1 -3.13826 | overlap 2934583 GTCCTTTTTTCTACG GTCCTCCTC CCCG GAGGGGGGC ATTTCATTATTTTTC TERM 3576 2934757 - 2934742 - R 77 -3.9 -5.24129 | GCGCTGTACAAAAAA CCGCC AGCCAA GGCAG TTAAGAGTGTGTTCC TERM 3577 2935439 - 2935424 - R 100 -7.5 -5.64274 | opp_overlap 2935424 TCAGGTATAAAAAAA CCCGC TCATCG GCGGG TTTAAGCTGTGTGGC SSON_2789 2936279 - 2935518 - | putative bacteriophage protein TERM 3578 2935868 - 2935878 + g 72 -5.4 -4.56133 | opp_overlap 2935868, overlap 2935862 CAATTTTCACAGAAA CTCT TAA AGAG TTTTCGTTCTTCAAC TERM 3579 2936159 - 2936143 - G 74 -7.9 -4.07687 | opp_overlap 2936141 ACCGGGCGCTCAAAA CCGTCGA AAG TCGGCGG GCGTATTTCCATTGC TERM 3580 2936465 - 2936451 - R 91 -7.1 -5.58179 | opp_overlap 2936451 2936453 2936456 TACGACAATAAAAAA CACGC TCGCG GCGTG TGTCTGTCGCGGTCT SSON_2790 2936948 - 2936562 - | antitermination protein Q-like protein SSON_2791 2937309 - 2936938 - | putative endonuclease SSON_2792 2937566 - 2937309 - | putative bacteriophage protein SSON_2793 2939095 - 2937563 - | putative helicase TERM 3581 2937987 - 2937999 + gr 81 -6.2 -4.82901 | GCAAGGTCATGACGC CCCG TGGTT CGGG TTTTTATCAGCCCGA SSON_2794 2939975 - 2939070 - | insertion element IS2 transposase InsD SSON_2795 2940298 - 2939933 - | insertion sequence 2 OrfA protein TERM 3582 2941116 - 2941134 + r 79 -9.6 -3.76482 | TATACTCTTTGCTCA CCGCCATT TTT AATGGTGG TTGTTCCTACTGTGC SSON_2797 2942235 - 2942092 - | hypothetical protein TERM 3583 2942518 - 2942541 + r 100 -11 -5.34309 | opp_overlap 2942518 CACAGCACAGATCAA GGGGTTACGT GAAA GCGTAGCCCC TTTTTCTTTGGTAGT SSON_2798 2944142 - 2942664 - | hypothetical protein TERM 3584 2943340 - 2943364 + g 70 -3.5 -4.65666 | TCAATTAATACCCCC CGGAATTCTTT CAC AAAGGCATCCG TTATTTTTTGAATAT SSON_2799 2944845 - 2945348 + | IS1 ORF TERM 3585 2945697 - 2945676 - T 80 -5.8 -5.03715 | opp_overlap 2945675 2945683 AGTACCTGGAAAAAA TGCCTGCT ATGCCA AGCGGGCA AATTGCTTACATGTG SSON_2801 2946312 - 2945809 - | IS1 ORF TERM 3586 2948266 - 2948278 + G 72 -6.9 -4.17048 | AATATCAATATTCCT GGGCG TAG CGCTC TTCTTTTAGGGAAAA SSON_2802 2946772 - 2948325 + | putative enzyme TERM 3587 2948331 - 2948368 + F 71 -7 -4.10552 | opp_overlap 2948331, overlap 2948334 2948335 2948336 2948338 CTATTTATAATTTAA TGTTATATCTGCCCCG ATAAAA CGGGGCAGATAATATG TTTAGTTTACTAACG TERM 3588 2948334 - 2948366 + F 82 -11.5 -3.64541 | gap 1, opp_overlap 2948331, overlap 2948331 2948335 2948336 2948338 TTTATAATTTAATGT TA-TATCTGCCCCG ATAAAA CGGGGCAGATAATA TGTTTAGTTTACTAA TERM 3589 2948335 - 2948364 + F 85 -12.2 -3.39117 | opp_overlap 2948331, overlap 2948334 2948331 2948336 2948338 TTATAATTTAATGTT ATATCTGCCCCG ATAAAA CGGGGCAGATAA TATGTTTAGTTTACT TERM 3590 2948336 - 2948363 + F 90 -15.7 -2.62386 | opp_overlap 2948331, overlap 2948335 2948334 2948331 2948338 TATAATTTAATGTTA TATCTGCCCCG ATAAAA CGGGGCAGATA ATATGTTTAGTTTAC TERM 3591 2948338 - 2948361 + F 84 -13.9 -2.83953 | opp_overlap 2948331, overlap 2948336 2948335 2948334 2948331 TAATTTAATGTTATA TCTGCCCCG ATAAAA CGGGGCAGA TAATATGTTTAGTTT TERM 3592 2948393 - 2948410 + F 81 -4.9 -5.24129 | CTAACGGTCATTTTG CAGTGAA GCCA TTTACTG TTTTTTATCGACCAG TERM 3593 2949282 - 2949299 + GF 72 -9.1 -3.53012 | TTCCGCCATCCACTG GCGCGTC GCCC GATGCGC TTTGCCGCGCCGCCG SSON_2803 2948661 - 2949638 + | hypothetical protein TERM 3594 2950214 - 2950194 - gf 72 -2.6 -4.99861 | overlap 2950195 2950196 CAGTAAGCATAAAAA CGGCGTG-GT GAT ACGCAC-CCG TCAGGGCGGTGAATA ygaF 2949592 - 2950926 + | hypothetical protein TERM 3595 2951454 - 2951506 + G 74 -9.8 -3.50393 | gap 2, opp_overlap 2951447 2951448 CCCGTAAAGCCGGTC CGGCG-CTGGC-GGCAGGCTGCACCA TGG TGCTGAAGCCCGCCAGTCAGACACCG TTCTCTGCGCTGGCG gabD 2950949 - 2952397 + | succinate-semialdehyde dehydrogenase I TERM 3596 2952808 - 2952772 - g 70 -4.2 -4.61527 | opp_overlap 2952796, overlap 2952761 2952773 AAAACGCGGTAAAAA TCGCCCGCGCCGCCAC CAAAC GTAGCGGCACCATCGC TTTTAGCGGCGCGTA gabT 2952411 - 2953691 + | 4-aminobutyrate aminotransferase gabP 2954002 - 2955318 + | transport permease protein of gamma-aminobutyrate TERM 3597 2955544 - 2955567 + G 72 -6.8 -4.18018 | gap 1, overlap 2955546 ATCGGGTGGCGTCTA TGTCAGAGCAG GAG CTGCTC-GATA TTTTCGATGCCCGCG TERM 3598 2955909 - 2955934 + G 73 -11.8 -2.56596 | opp_overlap 2955892, overlap 2955905 CTGACTGCGGCGGTA CTGGCGCGAG ATACCG CGCGCGCCAG TGAGTTAATGCGCCA ygaE 2955339 - 2956001 + | DNA-binding transcriptional regulator CsiR ygaU 2956451 - 2956002 - | hypothetical protein TERM 3599 2956029 - 2956051 + g 100 -10.6 -4.63184 | overlap 2956030 2956046 AATACGCAACACTTG CCCCGGATAA ATT TTATCCGGGC TTTTTAGCATCGGTT TERM 3600 2956030 - 2956050 + g 95 -14.1 -3.37188 | overlap 2956029 2956046 ATACGCAACACTTGC CCCGGATAA ATT TTATCCGGG CTTTTTAGCATCGGT TERM 3601 2956067 - 2956081 + g 71 -2.8 -4.77567 | overlap 2956069 TTTTTAGCATCGGTT TATTCG CTT CGAAGA TTTTATTGTACAGAT TERM 3602 2956519 - 2956500 - R 81 -12.8 -3.29649 | AGTGTAGCAGAGGAA CGCGGCGC GTTA ACGCCGCG GGGGTGAGCACAGGT SSON_2810 2956693 - 2956535 - | hypothetical protein TERM 3603 2956744 - 2956732 - H 78 -6.3 -4.58395 | CTCATTGTTTAAAAA GAGAT TTT ATCTC TTAAGCGTAGTAATT SSON_2811 2956876 - 2957175 + | hypothetical protein ygaP 2957185 - 2957709 + | hypothetical protein stpA 2958160 - 2957756 - | DNA binding protein, nucleoid-associated TERM 3604 2957846 - 2957866 + g 81 -8.3 -4.32857 | GGTCCAGGTTTTAGT TTCACCGTT AAC ATCGGTGAA TTTATATTTCGCCGG TERM 3605 2957876 - 2957893 + g 83 -6.2 -5.00616 | overlap 2957875 GGTGAATTTATATTT CGCCGG ACGCGG CTGGCG TTTTTTACCAGCGCG TERM 3606 2958838 - 2958813 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 2958821, overlap 2958814 2958828 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 3607 2959818 - 2959846 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SSON_2814 2958675 - 2959871 + | ISSfl2 ORF SSON_2815 2960280 - 2960729 + | hypothetical protein TERM 3608 2960738 - 2960764 + T 93 -12.2 -3.68619 | overlap 2960740 AGCCTGACTCTTCTT TTCGCGACTGGC ATC GCCAGTCGCGTC TTTAACTGGCTTCGC TERM 3609 2960740 - 2960762 + T 100 -19.2 -3.42283 | overlap 2960738 CCTGACTCTTCTTTT CGCGACTGGC ATC GCCAGTCGCG TCTTTAACTGGCTTC ygaC 2961110 - 2960766 - | hypothetical protein TERM 3610 2960932 - 2960942 + g 70 -5.4 -4.43681 | GGTTCAGCCAGTGTC GAAC TAC GTTC TTTTAATGTTGGATG ygaM 2961250 - 2961591 + | hypothetical protein TERM 3611 2961623 - 2961643 + F 100 -12.6 -4.89063 | AATACGCGTCTTTAA CCCCGAAG CCTGT CTTCGGGG TTTCTTTTTGCCTGG nrdH 2961839 - 2962084 + | glutaredoxin-like protein TERM 3612 2963758 - 2963784 + G 90 -14.4 -2.72263 | overlap 2963758 ATTCCCCCGATTTTG CCCGCACGGTAG AGA CTGCCGTGCGCG GTTTAACGGCGGTGT TERM 3613 2963758 - 2963785 + G 95 -14.2 -3.54129 | gap 1, overlap 2963758 ATTCCCCCGATTTTG CC-CGCACGGTAG AGA CTGCCGTGCGCGG TTTAACGGCGGTGTC nrdE 2962464 - 2964608 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 2964618 - 2965577 + | ribonucleotide-diphosphate reductase subunit beta TERM 3614 2965692 - 2965716 + F 87 -7.2 -5.15381 | CTCTGTTGCATTATT CGCCTGAA ACCACAATA TTCAGGCG TTTTTTCGCTATCTT proV 2965933 - 2967135 + | glycine betaine transporter ATP-binding subunit proW 2967128 - 2968192 + | glycine betaine transporter membrane protein TERM 3615 2968202 - 2968220 + F 85 -12.4 -3.31144 | AAGTAACTCTGCACT TGCCCGGT AAC GCCGGGCA TTATCACCCTGCCAA proX 2968250 - 2969242 + | glycine betaine transporter periplasmic subunit TERM 3616 2969352 - 2969383 + F 88 -12.2 -3.48924 | opp_overlap 2969362, overlap 2969353 TACACTCATTCCGTA TGGCGGATAAGGCG TTTT CGCCGCATCCGCCG TTCTGTGCACAATGC TERM 3617 2969353 - 2969382 + F 81 -13.5 -2.6914 | opp_overlap 2969362, overlap 2969352 ACACTCATTCCGTAT GGCGGATAAGGCG TTTT CGCCGCATCCGCC GTTCTGTGCACAATG TERM 3618 2969711 - 2969724 + G 77 -6.7 -4.45738 | overlap 2969710 CGCAGTTGGGCTATG CAGCA GGTC TGCTG TTTCTTGTTCCCCTC SSON_2825 2969533 - 2970717 + | permease TERM 3619 2971183 - 2971169 - g 77 -7 -4.4874 | opp_overlap 2971170, overlap 2971170 TGCAAAAATCGAAAA CCGCCC TGT GGGCGT TTGGCCTGACGGATG TERM 3620 2971170 - 2971182 + G 81 -10.5 -3.60098 | opp_overlap 2971169 2971170 GCAAAAATCGAAAAC CGCCC TGT GGGCG TTTGGCCTGACGGAT TERM 3621 2971182 - 2971170 - g 76 -10.5 -3.28159 | opp_overlap 2971170, overlap 2971169 GCAAAAATCGAAAAC CGCCC TGT GGGCG TTTGGCCTGACGGAT SSON_2826 2970841 - 2971578 + | hypothetical protein TERM 3622 2971805 - 2971815 + G 70 -6.8 -4.03234 | GTCGGCTTCGCGGTA CTGG GTG CCAG TTTCTATAAAACACG ygaH 2971568 - 2971903 + | hypothetical protein emrR 2971994 - 2972524 + | transcriptional repressor MprA TERM 3623 2972572 - 2972595 + F 100 -12.5 -4.56597 | opp_overlap 2972571 2972570 2972568 2972588 AAAGAAAAAATGACC GGCCAGCAT CGCAAC ATGCTGGCC TTTTTGGCAAGCAGG emrA 2972651 - 2973823 + | multidrug resistance secretion protein emrB 2973840 - 2975378 + | membrane translocase TERM 3624 2975389 - 2975408 + T 100 -12.2 -5.1848 | opp_overlap 2975385 2975389 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT TERM 3625 2975408 - 2975389 - T 88 -12.2 -3.50422 | opp_overlap 2975389, overlap 2975385 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT ygaG 2975957 - 2975442 - | S-ribosylhomocysteinase TERM 3626 2976076 - 2976093 + r 100 -11.3 -5.58522 | CAGAGATGAAATTTT GGCCACT CACG AGTGGCC TTTTTCTTTTCTGTC gshA 2977663 - 2976107 - | glutamate--cysteine ligase SSON_2833 2978164 - 2977736 - | hypothetical protein yqaB 2978727 - 2978161 - | fructose-1-phosphatase TERM 3627 2978919 - 2978934 + r 72 -9 -3.54743 | overlap 2978907 GTTCGCCCTTCGGGC CGTTGC TGGC GCAACG TTATCCTTCCTGGTG TERM 3628 2979177 - 2979195 + r 71 -9.5 -3.14211 | overlap 2979194 GGATTACTCGCCTTG CGGCTCG CCCTT CGGGCCG TTGCTAAAGCAACGT TERM 3629 2979194 - 2979209 + r 70 -9 -3.42996 | overlap 2979177 GCTCGCCCTTCGGGC CGTTGC TAAA GCAACG TTATCATCCCTGGTG csrA 2980236 - 2980051 - | carbon storage regulator alaS 2983101 - 2980471 - | alanyl-tRNA synthetase recX 2983729 - 2983229 - | recombination regulator RecX TERM 3630 2983777 - 2983760 - R 100 -10.5 -4.86862 | opp_overlap 2983759 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC AGGTTTTGCTGATAA recA 2985018 - 2983957 - | recombinase A TERM 3631 2984759 - 2984798 + g 100 -14.4 -4.08064 | gap 1, opp_overlap 2984743, overlap 2984760 GCACAGGTTTTACCT TCACGCTG-CGCTGCGG CGATCAC CTGCAGCGTCAGCGTGG TTTTACCGGAAGATT TERM 3632 2984760 - 2984797 + g 95 -15.7 -3.04517 | gap 1, opp_overlap 2984743, overlap 2984759 CACAGGTTTTACCTT CACGCTG-CGCTGCGG CGATCAC CTGCAGCGTCAGCGTG GTTTTACCGGAAGAT ygaD 2985595 - 2985098 - | competence damage-inducible protein A TERM 3633 2985740 - 2985696 - R 84 -5 -5.28778 | gap 1, opp_overlap 2985697 2985701, overlap 2985697 AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGCAAAT-AGT TACTGCACGCGCGCC TERM 3634 2985739 - 2985697 - R 72 -8.5 -3.76182 | gap 1, opp_overlap 2985697 2985701, overlap 2985696 GGATTCAGAAAAAAG CTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGCAAAT-AG TTACTGCACGCGCGC mltB 2986825 - 2985740 - | murein hydrolase B TERM 3635 2987295 - 2987308 + G 82 -8.1 -4.45771 | overlap 2987303 GTTACCTGCTGCTAC CGTGC ATTG GCACG TTTGTCTTTTGCAAT srlA 2987081 - 2987644 + | PTS system, glucitol/sorbitol-specific IIC component, one of two TERM 3636 2988007 - 2987988 - g 79 -3.6 -5.093 | overlap 2987991 CGTAAAAGAAGAAAA CATCAC TGTAGTGG GTGATG CGACACCACAACCCT srlE 2987641 - 2988600 + | PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components srlB 2988611 - 2988982 + | glucitol/sorbitol-specific PTS system component IIA TERM 3637 2989785 - 2989758 - f 77 -10.7 -3.34344 | gap 1, overlap 2989761 2989778 TGATGTTGTAATCAA CAGCGGAGATCC GTTAA GGATCTCCG-TG AGACTAATAGAATGC TERM 3638 2989783 - 2989761 - f 80 -13.5 -2.54098 | overlap 2989758 2989778 TGTTGTAATCAACAG CGGAGATCC GTTAA GGATCTCCG TGAGACTAATAGAAT TERM 3639 2989824 - 2989798 - f 100 -15.2 -3.73982 | GTGAGACTAATAGAA TGCCTGATGCGC TAC GCTCATCAGGCA TACAGGACTTCCGCC TERM 3640 2990021 - 2990009 - g 71 -9.1 -3.53091 | overlap 2990012 AGCGGGCGCTTTAAA CCACG GGT CGTGG TCGCCATCGCCCTGG gutM 2989859 - 2990218 + | DNA-binding transcriptional activator GutM TERM 3641 2990522 - 2990544 + G 75 -4.8 -4.73613 | opp_overlap 2990522 ACCCACAAGAAAGAG CTGATAGCAG AAG CTGCCGTTAG TTTTATTCATGATGG TERM 3642 2990979 - 2990955 - g 78 -10.8 -3.55444 | opp_overlap 2990977 TTTGCAGTCTTGAAA GCGTCGATAA GCTGA TTACCGACGC AGGTATCGATCCGGC srlR 2990285 - 2991058 + | DNA-bindng transcriptional repressor SrlR gutQ 2991051 - 2992016 + | D-arabinose 5-phosphate isomerase ygaA 2993527 - 2992013 - | anaerobic nitric oxide reductase transcription regulator TERM 3643 2993813 - 2993799 - g 70 -4.2 -4.68724 | overlap 2993800 GTACGGAATATAAAA CGCTAC GCG GCAGCA GTTACAACAGCTACC SSON_2854 2993714 - 2995153 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3644 2995325 - 2995346 + G 77 -12.3 -2.72043 | overlap 2995324 2995313 AACGTGCCGACGACC TTACCCGCC AGAC GGCGGGTGA ATTTGCCGGGCAGTT TERM 3645 2995458 - 2995482 + G 81 -10 -3.86015 | opp_overlap 2995452 GCAATACGACAAGCT GGTGCTGGCA ACTGG TGCCAGTGCC TTTGTCCCGCCAGTG TERM 3646 2995896 - 2995871 - g 90 -13.3 -3.53224 | gap 1, opp_overlap 2995887 GACTGCGCCCGGAAA CAGCCCTGGCAC GAC GCGCC-GGGCTG ACGATTAATCGCGGC ygbD 2995150 - 2996283 + | nitric oxide reductase TERM 3647 2996337 - 2996304 - T 83 -9.5 -4.08216 | opp_overlap 2996311 2996312 2996314 2996324, overlap 2996305 CTACTGTGCCTAAAA TGTCGGATGCGACGC TGGC GCGTCTTATCCGACC TACGGGGACGCATGT TERM 3648 2996336 - 2996305 - T 82 -13 -3.04715 | opp_overlap 2996311 2996312 2996314 2996324, overlap 2996304 TACTGTGCCTAAAAT GTCGGATGCGACGC TGGC GCGTCTTATCCGAC CTACGGGGACGCATG hypF 2998663 - 2996411 - | transcriptional regulatory protein TERM 3649 2997010 - 2996996 - G 90 -11.4 -3.86346 | opp_overlap 2997004 2997005 CCACTCCGGCACAAA GCGCAG GCA CTGCGC CAGCAGGTTTCGCCA TERM 3650 2998642 - 2998652 + g 77 -3.2 -5.09426 | opp_overlap 2998629 TACGCAGTTGGACAC CGCA AGA TGTG TTTTTTGCCATTGAG TERM 3651 2998828 - 2998842 + r 93 -9.2 -4.85599 | opp_overlap 2998825 2998827 TTTTTAGAACATCAG CGCCGT ACG GCGGCG TTTTTCTGCACTCAG hydN 2999343 - 2998816 - | electron transport protein HydN TERM 3652 2999478 - 2999449 - R 91 -7.9 -5.18357 | opp_overlap 2999451 2999472, overlap 2999451 TAATGCAGGAAAAAA GATGTCATCGACA CTAG TGACGATGACATG TGATGACAATGTTTA TERM 3653 2999451 - 2999476 + r 72 -10.5 -2.79679 | opp_overlap 2999451 2999449, overlap 2999472 ATGCAGGAAAAAAGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT TERM 3654 2999476 - 2999451 - R 90 -10.5 -4.2131 | opp_overlap 2999451 2999472, overlap 2999449 ATGCAGGAAAAAAGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT ascG 3000504 - 2999491 - | ascBF operon repressor TERM 3655 3001309 - 3001332 + G 75 -5.2 -4.66318 | opp_overlap 3001291, overlap 3001295 3001311 GCTGGCGATTGCCAT CGCGGGTGTG CTGG TACATCCGAG TTTTATTGAACTGAT ascF 3000761 - 3002218 + | cellobiose/arbutin/salicin-specific PTS system components IIBC TERM 3656 3002550 - 3002561 + G 74 -2.2 -5.02439 | overlap 3002541 AATCACGCCCAATCA GCAG GGCA TTGC TTTTTATCGTTCTGT TERM 3657 3003004 - 3003015 + G 84 -3.6 -5.29782 | GCGCTGGAGAAAGAC CGGG AAAA CCTG TTTTTTATCGATGTG ascB 3002227 - 3003651 + | cryptic 6-phospho-beta-glucosidase TERM 3658 3003690 - 3003658 - T 70 -9.8 -3.11768 | gap 1, opp_overlap 3003669, overlap 3003656 TTAGAGTAGGTAACA GTGCCGGATGCGGCG TGAA CGCCTTATCCGGC-C TACATGTCGCACGAA TERM 3659 3003738 - 3003714 - T 76 -12.1 -2.57136 | opp_overlap 3003706 3003705, overlap 3003713 GCACGAACCAGGAAG GCCCGATAAGC GCA GCGCATCGGGC AATCTGGGGTTTGGC SSON_2861 3004184 - 3003765 - | hypothetical protein TERM 3660 3003955 - 3003965 + g 74 -8.2 -3.88787 | opp_overlap 3003937 3003936 3003949 ACGCCAACAGGCATT GCCG CAA CGGC TTTGTCGAACTCTGC SSON_2862 3004492 - 3004181 - | putative cytoplasmic protein SSON_2863 3005427 - 3004654 - | putative periplasmic or exported protein TERM 3661 3004798 - 3004787 - G 77 -7.2 -4.48987 | GGGGTATAAGTAAAA CGCG TGAG CGCG GGATAGCTTAACTTG hycI 3005922 - 3005452 - | hydrogenase 3 maturation protease TERM 3662 3005778 - 3005788 + g 70 -6.8 -4.14243 | GCAGTTCACGGATGG CGAC GAT GTCG TTTTCCGGTGCACTA hycH 3006325 - 3005915 - | HycH hycG 3007089 - 3006322 - | hydrogenase activity hycF 3007631 - 3007089 - | formate hydrogenlyase complex iron-sulfur subunit TERM 3663 3007201 - 3007242 + g 76 -12.4 -2.59797 | gap 1, overlap 3007200 3007198 CGGTGGTTTTCCGCG CGGCTGTCGCCGTTGTGCT TAAGC AGCGCAATGGCG-TAGTCG ATCTCTTTCTGGACG hycE 3009338 - 3007641 - | large subunit of hydrogenase 3 hycD 3010279 - 3009356 - | membrane-spanning protein of hydrogenase 3 (part of FHL complex) hycC 3012108 - 3010282 - | formate hydrogenlyase subunit 3 hycB 3012716 - 3012105 - | small subunit of hydrogenase-3, iron-sulfur protein TERM 3664 3012567 - 3012584 + g 71 -2.7 -4.86621 | gap 1, opp_overlap 3012569, overlap 3012569 3012570 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTCAGCAT TERM 3665 3012792 - 3012754 - R 79 -8.3 -4.2558 | gap 1 CATTTTTGACGAAAA CATGCCGATGAAATGTCA TTTT CGACACT-CATCGACACG CCCATCCCCAAACAG TERM 3666 3012819 - 3012805 - R 82 -11.4 -3.57263 | opp_overlap 3012817 ACGCCCATCCCCAAA CAGGCG TAA CGCCTG CAAAACGGGCAAAGC hycA 3013302 - 3012841 - | formate hydrogenlyase regulatory protein HycA hypA 3013514 - 3013864 + | hydrogenase nickel incorporation protein hypB 3013868 - 3014740 + | hydrogenase nickel incorporation protein HypB TERM 3667 3014859 - 3014884 + G 72 -9.7 -3.28497 | overlap 3014853 AAACGGTCAGCCGCG CGTGGGCCAGT GGGT ACTGGTACACG TTGGCTTTGCCATGA hypC 3014731 - 3015003 + | hydrogenase isoenzymes formation protein TERM 3668 3015352 - 3015342 - g 72 -6.8 -4.18018 | CTGTTGCAGGCAAAA GCAC GCG GTGC CGATGTGCGCATCGT TERM 3669 3015616 - 3015637 + G 72 -5.9 -4.36914 | GCCACGTTAGTATGG TTATCGGCA CTGA TGCCTATAA TTTTATCGCCAGCGA hypD 3015003 - 3016124 + | pleiotrophic effects on 3 hydrogenase isozymes hypE 3016163 - 3017131 + | hypothetical protein TERM 3670 3017171 - 3017187 + T 100 -13.7 -3.72576 | AGTCAATGACCTTTT GCACCGC TTT GCGGTGC TTTCCTGGAAGAACA TERM 3671 3017286 - 3017302 + T 73 -10.1 -3.35775 | overlap 3017285 CAGCAGCCCGATCTG GCCTCGC TGT GTGAGGC TCTTTCGCAACTGGT TERM 3672 3017373 - 3017321 - T 75 -10 -3.60792 | gap 2, opp_overlap 3017332 3017334 3017369 TTCGCAACTGGTAAA GCGTTCTGCGCTCGCCGACAACGC GGCTATT GTGTTGT-GGCAAGCGCAGA-CTC AACGTGCGTCTTATT TERM 3673 3018798 - 3018786 - T 81 -3.3 -5.44119 | overlap 3018787 GCGATCTGAAAAAAA TGGTC GCC GACCG AGAGTTCCGTAGCGA TERM 3674 3019317 - 3019290 - T 93 -12 -3.6715 | opp_overlap 3019289 3019291, overlap 3019283 3019291 3019302 TGATTTAACTGCAAA TTGCCGGACAGA TCTG CCTGTCCGGCAT ACTATTCACGAGGTT TERM 3675 3019291 - 3019316 + T 86 -14.8 -2.73994 | opp_overlap 3019283 3019291 3019290 3019302, overlap 3019289 GATTTAACTGCAAAT TGCCGGACAG ATCTGC CTGTCCGGCA TACTATTCACGAGGT TERM 3676 3019316 - 3019291 - T 93 -15.5 -2.79968 | opp_overlap 3019289 3019291, overlap 3019283 3019290 3019302 GATTTAACTGCAAAT TGCCGGACAGA TCTG CCTGTCCGGCA TACTATTCACGAGGT ygbA 3019672 - 3019319 - | hypothetical protein TERM 3677 3020001 - 3020045 + G 77 -8.6 -4.09864 | opp_overlap 3020023 CATACGCCCATGATG CAGCAGTATCTCAGGCTG AAAGCCCAG CATCCCGAGATCCTGCTG TTTTACCGGATGGGT TERM 3678 3020544 - 3020532 - g 72 -10.5 -3.05463 | ATGTCGCTGATTGAA GGCCG TCG CGGCC TGCGCCGTCGCCCGC TERM 3679 3022440 - 3022423 - g 72 -6.3 -4.31433 | gap 1 CAGTGCCAGAAGAAA CTTCG-CC TGC GGTCGAAG CACTGGAAAATCTCG mutS 3019959 - 3022520 + | DNA mismatch repair protein TERM 3680 3022553 - 3022527 - T 87 -11 -3.9461 | opp_overlap 3022527 CTGGTGTAATAACAA TTCCCGATAG TCTTTTG CTATCGGGAA TATTAACGACAACTG TERM 3681 3022527 - 3022553 + T 78 -11.7 -3.01924 | opp_overlap 3022527 CTGGTGTAATAACAA TTCCCGATAGT CTTTT GCTATCGGGAA TATTAACGACAACTG TERM 3682 3022620 - 3022585 - T 100 -10.6 -5.38326 | CGAATCAAATAAAAA TACCCTGTATAATAGG AAAG CTTATTTTACAGGGTA AAACCATGCCATCTA SSON_2882 3023562 - 3023059 - | IS1 ORF ygbI 3024907 - 3024110 - | putative DEOR-type transcriptional regulator TERM 3683 3024390 - 3024372 - G 93 -8.9 -5.0065 | GATGCAGAAATAAAA GCCTGAT CAATC ATCAGGC TGCGCAGCATGGTCG SSON_2884 3025073 - 3025981 + | putative dehydrogenase TERM 3684 3027032 - 3027042 + G 75 -6.8 -4.30719 | GGTTAGCAGCGGAAG GCGT GAC ACGC TTTATTGTCGCAGGC SSON_2885 3025978 - 3027240 + | hypothetical protein ygbL 3027237 - 3027875 + | putative aldolase ygbM 3027880 - 3028656 + | hypothetical protein TERM 3685 3028694 - 3028711 + F 73 -11.3 -2.56095 | opp_overlap 3028691, overlap 3028692 CGTACCCATACATCC CCCCATC TACG GATGGGG TAGGTTAACTATAAC SSON_2888 3028745 - 3030109 + | inner membrane permease YgbN TERM 3686 3030117 - 3030146 + T 81 -12.3 -3.28712 | opp_overlap 3030122, overlap 3030122 TAATTTGACCTTAAT AAAAAGGTCCGAT GAGC ATCGGACCTTTTA TTGTGCACAGAAAAG TERM 3687 3030122 - 3030141 + T 100 -12.2 -4.77165 | opp_overlap 3030122, overlap 3030117 TGACCTTAATAAAAA GGTCCGAT GAGC ATCGGACC TTTTATTGTGCACAG TERM 3688 3030141 - 3030122 - T 100 -12.2 -5.08601 | opp_overlap 3030117 3030122 TGACCTTAATAAAAA GGTCCGAT GAGC ATCGGACC TTTTATTGTGCACAG TERM 3689 3030184 - 3030161 - T 100 -14.6 -4.52857 | opp_overlap 3030161 ATTGTGCACAGAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT TERM 3690 3030161 - 3030184 + T 95 -12.4 -3.87075 | opp_overlap 3030161 ATTGTGCACAGAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT rpoS 3031195 - 3030203 - | RNA polymerase sigma factor RpoS nlpD 3032397 - 3031258 - | lipoprotein NlpD TERM 3691 3031519 - 3031500 - G 70 -7 -4.07133 | opp_overlap 3031499 TACCGGCATAAACAA CGCGGCCA TCTG CGGTCGCG ATAATTGCCTGTCCT TERM 3692 3031722 - 3031736 + g 72 -5 -4.65078 | TGGTCGCAGTTGGCT TGTTGT TCG GCAACA TTTTGTTAGCACTCT TERM 3693 3031993 - 3032016 + g 83 -5.3 -5.04385 | GTTGCCAGTAATCCA GGCGATATA GAAAAG TGTGTCGCC TTTTTTCACGGTATA pcm 3033163 - 3032537 - | protein-L-isoaspartate O-methyltransferase TERM 3694 3032676 - 3032702 + g 70 -10.9 -2.72511 | overlap 3032675 AGAATCCCGCCTTCG TCCAGCTGCGT CATTA GCGCAGTTGGA ATTTCCGGCGGTGCC surE 3033918 - 3033157 - | stationary phase survival protein SurE truD 3034948 - 3033899 - | tRNA pseudouridine synthase D ispF 3035424 - 3034945 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3036134 - 3035424 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3695 3036099 - 3036087 - G 73 -9.1 -3.57462 | CATTCGACGGCCAAA TCCGG CCG CCGGA ACCACGGCGCAAACA ftsB 3036464 - 3036153 - | cell division protein FtsB TERM 3696 3036547 - 3036569 + r 74 -11.4 -2.82142 | opp_overlap 3036545, overlap 3036546 ATACCGCGACAACGC GGGCAAATGT ACC ACATTTGTCC ATTGTTACGTATACC ygbE 3036981 - 3036658 - | hypothetical protein cysC 3037636 - 3037031 - | adenylylsulfate kinase TERM 3697 3037576 - 3037546 - G 79 -12.6 -3.00525 | opp_overlap 3037542 3037546, overlap 3037541 3037549 GGCCGGTAAACCACA GCACTACACCACGA TGA CCGTGGTGTAGCTC GCGTTGTTGCACAGT TERM 3698 3037573 - 3037549 - G 90 -15.1 -2.7314 | opp_overlap 3037546 3037542, overlap 3037546 3037541 CGGTAAACCACAGCA CTACACCACGA TGA CCGTGGTGTAG CTCGCGTTGTTGCAC cysN 3039063 - 3037636 - | sulfate adenylyltransferase subunit 1 TERM 3699 3038199 - 3038183 - G 72 -5.8 -4.32034 | opp_overlap 3038183 CGATCACCATCAAAA GTCACG ATCCG CGCGAC GTTTGATTCCACACC cysD 3039973 - 3039065 - | sulfate adenylyltransferase subunit 2 TERM 3700 3040125 - 3040113 - H 76 -4.8 -4.88228 | opp_overlap 3040123 AGCTAATATCAAAAA GTGC TTAAG GCAC CGGATTTCTGGCGTT iap 3040225 - 3041262 + | alkaline phosphatase isozyme conversion aminopeptidase ygbF 3041823 - 3041530 - | hypothetical protein ygcH 3043144 - 3042740 - | putative cytoplasmic protein TERM 3701 3043618 - 3043593 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 3043601, overlap 3043594 3043608 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 3702 3044598 - 3044626 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SSON_2905 3043455 - 3044651 + | ISSfl2 ORF SSON_2906 3045568 - 3044822 - | putative cytoplasmic protein yghJ 3046634 - 3045579 - | putative cytoplasmic protein TERM 3703 3045818 - 3045828 + g 74 -3.2 -4.88405 | overlap 3045821 AAGCATAGGCACGGC TGGC AAA GCTA TTTTGTTTACCGGTT TERM 3704 3046498 - 3046486 - G 71 -9.1 -3.44553 | opp_overlap 3046485 3046486, overlap 3046478 TCAAAAAGTGCAGAA GTGCG CCA CGCAC GTTTCAGACTTTGCG SSON_2908 3046906 - 3046646 - | hypothetical protein SSON_2909 3047037 - 3047339 + | IS600 ORF1 SSON_2910 3047480 - 3048193 + | IS600 ORF2 SSON_2911 3048449 - 3048234 - | hypothetical protein TERM 3705 3048453 - 3048464 + r 78 -5.8 -4.87665 | TACAATACTCATTCA GCAG CCTC CTGC TTTTTCTCCCTGGCG SSON_2912 3048775 - 3048446 - | hypothetical protein SSON_2913 3050007 - 3048793 - | putative cytoplasmic protein TERM 3706 3050041 - 3050028 - R 74 -3.8 -5.00616 | TCCTCTCGTAAAAAA GACC ATCCCA GGTC GGTTGTCCATCTTTC ygcB 3052762 - 3050105 - | putative helicase TERM 3707 3050634 - 3050595 - G 75 -11.4 -3.05844 | overlap 3050598 TGTGGCATCTGAATA GCACCTTGCTCACGCAGC ACAC GCTGCGTCAGCCAGATTC GCCCATGATCGGGAT TERM 3708 3050631 - 3050598 - G 73 -11.7 -2.75074 | overlap 3050595 GGCATCTGAATAGCA CCTTGCTCACGCAGC ACAC GCTGCGTCAGCCAGA TTCGCCCATGATCGG TERM 3709 3051698 - 3051674 - G 70 -9.9 -3.1506 | opp_overlap 3051690 3051691 AAAGCGGTCCATTAA TGTGCGGGCAC TAT GTGCCAGCACC AGGCTGGGGCGGGAT TERM 3710 3052111 - 3052100 - G 71 -2.2 -5.0133 | overlap 3052101 GACGCGTGGAAAAAA TCGC GTTG ACGA ACCCGTCCAGTCTGC TERM 3711 3053209 - 3053239 + r 86 -9.1 -4.45083 | gap 1, opp_overlap 3053173 3053230 TGGGTTCGAACGCTG GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 3712 3053395 - 3053370 - R 100 -9.7 -5.45802 | opp_overlap 3053370 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 3054150 - 3053416 - | phosphoadenosine phosphosulfate reductase cysI 3055937 - 3054225 - | sulfite reductase subunit beta TERM 3713 3054609 - 3054580 - G 75 -7.2 -4.37092 | gap 1 ATGTTGTCGATAAAA GACGGCAGGAAAC GCTCT GCTTCC-GCCATC GCCAGCGGGCAAGTC TERM 3714 3055118 - 3055141 + g 80 -5.2 -4.90079 | gap 1, opp_overlap 3055119, overlap 3055119 3055121 GCGGCAGATAGCCAA ACT-CGCTCGC CGT GCGGGCGTAGG TTTTCTTGTTGCCGT TERM 3715 3055121 - 3055137 + g 75 -11.5 -2.88634 | opp_overlap 3055119, overlap 3055119 3055118 GCAGATAGCCAAACT CGCTCGC CGT GCGGGCG TAGGTTTTCTTGTTG cysJ 3057736 - 3055937 - | sulfite reductase subunit alpha TERM 3716 3056672 - 3056643 - G 70 -7.1 -4.03234 | gap 1, opp_overlap 3056662, overlap 3056660 TGCGCCGGAGAGAAA CGC-ACCATGTCGA CAA TCGGCGTGGTCGCG GCGTAATGCTGTAAC TERM 3717 3057645 - 3057631 - G 70 -7.1 -4.0056 | overlap 3057623 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TAGGCGTTAAATCGG TERM 3718 3057963 - 3057983 + H 72 -6.2 -4.21194 | ATTAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA TERM 3719 3058395 - 3058383 - g 91 -9.1 -4.67048 | opp_overlap 3058382 3058387, overlap 3058385 TGATGGTAAAAGAAA CCTGC ACC GCAGG GTGTATCTATCGCGG ygcM 3058052 - 3058417 + | putative 6-pyruvoyl tetrahydrobiopterin synthase TERM 3720 3058543 - 3058574 + GF 91 -11.5 -4.08689 | overlap 3058544 3058571 GCCGGTATTGCAGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGG TTTATCCGTTTTGTT TERM 3721 3058544 - 3058573 + GF 93 -15 -3.03587 | overlap 3058543 3058571 CCGGTATTGCAGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG GTTTATCCGTTTTGT TERM 3722 3058571 - 3058582 + GF 70 -3.6 -4.71426 | overlap 3058544 3058543 TACGCTGCGCGCGAG CGGG TTTA TCCG TTTTGTTACTGGAAC ygcN 3058465 - 3059766 + | hypothetical protein ygcO 3059721 - 3060017 + | hypothetical protein TERM 3723 3060501 - 3060479 - g 70 -4 -4.60797 | opp_overlap 3060482, overlap 3060480 GGGTGACAGAGAAAA TCCGCCAACC GCT GATTGCCGGT GGGCTGGTGTGCGAT ygcP 3060034 - 3060609 + | putative anti-terminator regulatory protein ygcQ 3061650 - 3060757 - | putative flavoprotein ygcR 3062399 - 3061614 - | putative transport protein ygcS 3063780 - 3062371 - | putative transport protein TERM 3724 3063099 - 3063089 - GR 77 -8.2 -4.08216 | overlap 3063090 TGAGCTTCTGCAAAA CGCC CCT GGCG CAGTAGCCAGCGTGG TERM 3725 3063760 - 3063739 - GR 100 -14.5 -3.9461 | GTCCGGTAATAAGAA CGGCTTCTC GCCT GAGAAGCCG AAAAGGCAACGCCCC TERM 3726 3063794 - 3063765 - GR 93 -11.4 -4.21936 | CTGAGAAGCCGAAAA GGCAACGCCCCG TCATCG CGGAACGCTGCC TGACACATTATTTTT SSON_2925 3064596 - 3063802 - | hypothetical protein TERM 3727 3064371 - 3064387 + g 70 -10.1 -3.17392 | TCCCTTCGCCCGTCG CCTTCGC AAT GCGAGGG TTACCTTCAGCCATA TERM 3728 3064657 - 3064681 + H 84 -7.8 -4.76041 | gap 1 GATGTGGCGAATGTC CGGGCCA-GCC GCGC GGCGTGGCACG TTTTTAATGCGTGTG TERM 3729 3066212 - 3066175 - H 100 -22.3 -5.86332 | opp_overlap 3066175 3066179 GTAAGGCAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 3730 3066175 - 3066212 + H 100 -20.1 -2.92712 | opp_overlap 3066175, overlap 3066179 GTAAGGCAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 3731 3066179 - 3066208 + H 100 -15.1 -4.13 | opp_overlap 3066175, overlap 3066175 GGCAAAAAAAAGAAA GGTAACTTCCCCC GCGA GAGGGAAGTTACC TTTCTCATTATCTCT TERM 3732 3066216 - 3066238 + H 82 -7.8 -4.62069 | AAGTTACCTTTCTCA TTATCTCTGG TAA CTGGAGATAA TTTTTAGCATAACGG TERM 3733 3066388 - 3066427 + H 100 -13 -6.08563 | opp_overlap 3066395 AATTACTAGAGACCT GAGAAAAGTAATCCACCT GAAA GGGCGGCTTACTTTTCTC TTTTTTTTGTCTATT TERM 3734 3066420 - 3066395 - H 72 -5.4 -4.4195 | opp_overlap 3066388 AGAGACCTGAGAAAA GTAATCCACC TGAAAG GGCGGCTTAC TTTTCTCTTTTTTTT yqcE 3066460 - 3067737 + | putative transport protein TERM 3735 3068355 - 3068370 + T 87 -10.4 -4.06419 | CTGGCGACGCATTTC CCGGCA GGAC TGCCGG TTGTTTGTACCACCA TERM 3736 3069286 - 3069254 - T 75 -9.8 -3.63569 | gap 1, overlap 3069258 CGAATGCGTGAATAA GGT-AGGCCGGGCGG AAAA CTGCCCGGCCTGAAC ATACCTGAATGGTTA TERM 3737 3069281 - 3069258 - T 90 -15.2 -2.6563 | overlap 3069254 TGCGTGAATAAGGTA GGCCGGGCGG AAAA CTGCCCGGCC TGAACATACCTGAAT SSON_2929 3069952 - 3069449 - | IS1 ORF TERM 3738 3070964 - 3070984 + r 72 -8.5 -3.72893 | opp_overlap 3070931 TTTACAGGTTCCACC CATTTATAA CGC TTATAAATG TTTAATCAGGCAATA ygcF 3071661 - 3070990 - | hypothetical protein TERM 3739 3071513 - 3071502 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 3740 3071605 - 3071592 - G 84 -3.7 -5.24551 | overlap 3071593 GTAAACGAATAAAAA TGGCG GGGA CGCCG GTAAAGTAACCCTCA SSON_2931 3071962 - 3072264 + | IS600 ORF1 SSON_2932 3072405 - 3073118 + | IS600 ORF2 ygcG 3073221 - 3073970 + | hypothetical protein SSON_2934 3074484 - 3073981 - | IS1 ORF TERM 3741 3074905 - 3074886 - H 76 -2 -5.37345 | overlap 3074888 CTCAACCATAAAAAA TGCCAGCC CGGA GGCTGTAA TGCCGATCAGTTAAG TERM 3742 3074954 - 3074979 + H 100 -9.8 -5.61596 | opp_overlap 3074954 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3743 3074979 - 3074954 - H 72 -9.1 -3.61398 | opp_overlap 3074954 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_2935 3074969 - 3076315 + | IS4 orf TERM 3744 3076326 - 3076297 - T 89 -9.3 -4.59109 | overlap 3076299 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCCCGGAGGCT TERM 3745 3076324 - 3076299 - T 100 -16.3 -3.90762 | overlap 3076297 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCCCGGAGG eno 3077668 - 3076370 - | phosphopyruvate hydratase TERM 3746 3077711 - 3077739 + r 76 -11.7 -2.7458 | opp_overlap 3077713 3077716, overlap 3077710 CTGAAACTCCAGACA AACAACGCGTACC CAA GGTACGCGTTGCC GTTCTAACTTTTTTA TERM 3747 3077737 - 3077713 - R 100 -18.7 -4.07562 | opp_overlap 3077711 3077710, overlap 3077716 GAAACTCCAGACAAA CAACGCGTACC CAA GGTACGCGTTG CCGTTCTAACTTTTT TERM 3748 3077734 - 3077716 - R 100 -14.6 -4.15029 | opp_overlap 3077711 3077710, overlap 3077713 ACTCCAGACAAACAA CGCGTACC CAA GGTACGCG TTGCCGTTCTAACTT pyrG 3079393 - 3077756 - | CTP synthetase TERM 3749 3079063 - 3079084 + g 90 -11.5 -3.90744 | opp_overlap 3079052 TAACCTGCACGGTTG CGCCGAGGT AGTC ACCGCGGCG TTCTTTACGCAGAAC mazG 3080412 - 3079621 - | nucleoside triphosphate pyrophosphohydrolase TERM 3750 3079950 - 3079962 + g 74 -7.7 -4.11869 | opp_overlap 3079950 TCCAGTCGAAGCCAA CGTTG GCG CAACG TTTCTGGATTTTTTG chpA 3080818 - 3080483 - | toxin ChpA TERM 3751 3080745 - 3080725 - G 74 -9.7 -3.43264 | opp_overlap 3080727, overlap 3080727 AAGGACTCAGGACAA CAGCTGGAC GAT GTCCAGCTT GCTCGCTACCTTTTG TERM 3752 3080727 - 3080743 + g 81 -12.3 -3.19656 | opp_overlap 3080727 3080725 GGACTCAGGACAACA GCTGGAC GAT GTCCAGC TTGCTCGCTACCTTT TERM 3753 3080743 - 3080727 - G 83 -12.3 -3.28447 | opp_overlap 3080727, overlap 3080725 GGACTCAGGACAACA GCTGGAC GAT GTCCAGC TTGCTCGCTACCTTT chpR 3081066 - 3080818 - | antitoxin MazE relA 3083378 - 3081144 - | GDP/GTP pyrophosphokinase rumA 3084727 - 3083426 - | 23S rRNA 5-methyluridine methyltransferase TERM 3754 3085323 - 3085338 + G 72 -5.4 -4.56961 | AGAGATCTTTATTTC CAGCGT GATG ATGCTG TTTTGTATCGGTATT TERM 3755 3085656 - 3085635 - g 70 -4.3 -4.57837 | opp_overlap 3085636, overlap 3085636 AGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 3756 3086761 - 3086748 - g 71 -2.3 -5.02323 | overlap 3086743 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGCA barA 3084784 - 3087540 + | hybrid sensory histidine kinase BarA TERM 3757 3087737 - 3087756 + T 100 -10.7 -4.75518 | AGCATCAGTCTCAAG CCGGCTC CAGATA GAGCCGG TTTTGGTTTTCTGTC ygcX 3089112 - 3087772 - | putative glucarate dehydratase TERM 3758 3088591 - 3088615 + g 70 -10.7 -2.83403 | opp_overlap 3088594, overlap 3088590 ATGACGCAGGCGATA CCAGTCGCATG AGT CATCCGGCTGG CTTTGATACGGCAGA ygcY 3090473 - 3089133 - | putative glucarate dehydratase SSON_2946 3091827 - 3090475 - | putative transport protein TERM 3759 3091998 - 3091980 - R 76 -4.4 -4.93898 | overlap 3091943 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA SSON_2947 3092711 - 3092262 - | flavodoxin yqcB 3093511 - 3092729 - | tRNA pseudouridine synthase C SSON_2949 3093840 - 3093511 - | hypothetical protein TERM 3760 3093891 - 3093920 + r 79 -10.7 -3.51411 | opp_overlap 3093893, overlap 3093887 3093892 TAGCAGGAATAAAAA AAGGGAGCACTGT ATTC ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3761 3093892 - 3093919 + r 83 -14.2 -2.70525 | opp_overlap 3093893, overlap 3093891 3093887 AGCAGGAATAAAAAA AGGGAGCACTGT ATTC ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3762 3093918 - 3093893 - R 100 -17.7 -5.84381 | opp_overlap 3093892 3093891 3093887 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGTGCTCCC GGTTCGTTTCGCAGC syd 3095007 - 3094462 - | SecY interacting protein Syd TERM 3763 3094910 - 3094887 - G 74 -8.9 -3.9392 | opp_overlap 3094887 3094886 3094898 CGGTAGTTGAAATAA TGCACGGTG AAGGAA CACCGTACA GTTCCTCACTTAACG TERM 3764 3095777 - 3095755 - g 71 -10.6 -2.86271 | opp_overlap 3095753 3095767 3095768, overlap 3095752 3095767 CCGTCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 3095075 - 3095923 + | 7-cyano-7-deazaguanine reductase TERM 3765 3097068 - 3097051 - g 73 -4.1 -4.86731 | gap 1, overlap 3097032 GCTGGTGAAAGAAAA TCGCC-GC GAC ACAGGCGA TGCCTACAGCTTTAA ygdH 3096035 - 3097399 + | hypothetical protein TERM 3766 3097409 - 3097430 + F 93 -10.1 -4.72556 | overlap 3097427 ACGTAATCTCCCTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG TERM 3767 3097427 - 3097438 + F 71 -3.6 -4.7373 | overlap 3097409 GGTGACGTTTGTTGC CGGG TTTT CTCG TTTTTGGTCACATAC TERM 3768 3097684 - 3097709 + F 76 -8.5 -4.06527 | gap 1, overlap 3097690 AGAAGTCAGATGTCG TTTAATGGGCAA ATA TTGCCC-TTAAA TTCTCTTTTACTTTT TERM 3769 3097690 - 3097704 + F 73 -10 -3.32941 | overlap 3097684 CAGATGTCGTTTAAT GGGCAA ATA TTGCCC TTAAATTCTCTTTTA sdaC 3097955 - 3099244 + | serine transporter TERM 3770 3099253 - 3099272 + F 81 -12.8 -3.27786 | overlap 3099265 3099267 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 3771 3100079 - 3100059 - g 72 -5.3 -4.4767 | opp_overlap 3100059 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA sdaB 3099302 - 3100669 + | L-serine dehydratase TERM 3772 3100682 - 3100700 + F 80 -12.4 -3.08774 | overlap 3100674 TAATCGCTCTCCAGA GGCCTCGT TTT GCGAGGCC TCTTCCCGATTTCTC TERM 3773 3100950 - 3100939 - g 75 -7.2 -4.30576 | overlap 3100941 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG xni 3100691 - 3101536 + | exonuclease IX TERM 3774 3101589 - 3101623 + T 86 -12.9 -3.32844 | opp_overlap 3101591 3101599 TTTAATGCACTTATA TACCGGATAAGACGC GGCTA GCGTCGTATCCGGCA TTATCACATCAGCGC TERM 3775 3101621 - 3101591 - T 93 -15.5 -2.92389 | opp_overlap 3101589, overlap 3101599 TAATGCACTTATATA CCGGATAAGACGC GGCTA GCGTCGTATCCGG CATTATCACATCAGC fucO 3102792 - 3101641 - | L-1,2-propanediol oxidoreductase fucA 3103464 - 3102817 - | L-fuculose phosphate aldolase TERM 3776 3103688 - 3103655 - H 71 -3.9 -4.74801 | TAACCCCATTAAAAA TGACCGCTCTTAAAA ATAT TTATCAAAACGGTCA TTTTTCTATTCACCC TERM 3777 3104200 - 3104217 + G 77 -6.3 -4.62957 | gap 1 ACAAATTTCCAGGCT GGCCTGAT CCA ATC-GGCC TTTTACTTTGGTTAT TERM 3778 3104521 - 3104536 + G 72 -6.2 -4.38141 | GCAATTATCGCGGTT GTCTTT GGGC AAAGAC TTATTTTGTCTAACG fucP 3104011 - 3105327 + | L-fucose transporter TERM 3779 3105381 - 3105370 - f 79 -2.2 -5.63103 | CTGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC TERM 3780 3107200 - 3107227 + F 82 -12.9 -3.01791 | overlap 3107202 ACAAGCAAGAGTGGT TAGCCGGATAA GCAATG TTATCCGGCTA TATTGCAGGAGCGAT TERM 3781 3107202 - 3107225 + F 75 -11.1 -3.06696 | overlap 3107200 AAGCAAGAGTGGTTA GCCGGATAA GCAATG TTATCCGGC TATATTGCAGGAGCG fucK 3107214 - 3108662 + | L-fuculokinase fucU 3108664 - 3109086 + | protein of fucose operon TERM 3782 3109082 - 3109072 - f 76 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATATCGG TERM 3783 3109099 - 3109119 + F 73 -9.6 -3.34043 | overlap 3109100 TAATCTCATATCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 3784 3109100 - 3109118 + F 81 -13.1 -2.60212 | overlap 3109099 AATCTCATATCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 3785 3109392 - 3109410 + G 72 -11.6 -2.52464 | opp_overlap 3109391 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 3109144 - 3109875 + | DNA-binding transcriptional activator FucR ygdE 3111019 - 3109919 - | putative RNA 2'-O-ribose methyltransferase ygdD 3111407 - 3111012 - | hypothetical protein TERM 3786 3111380 - 3111366 - G 74 -8.5 -3.88603 | AGCCACAAAAATGAA GCCGC TAATG GCGGC GAAAATCAGCATAAA gcvA 3112343 - 3111426 - | DNA-binding transcriptional activator GcvA TERM 3787 3112585 - 3112599 + r 100 -10 -5.17576 | opp_overlap 3112584 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 3788 3112650 - 3112669 + r 100 -10.7 -5.86332 | opp_overlap 3112650 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC TERM 3789 3112669 - 3112650 - R 70 -10.7 -2.57423 | opp_overlap 3112650 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC SSON_2966 3112924 - 3112694 - | hypothetical protein SSON_2967 3113113 - 3114318 + | cysteine sulfinate desulfinase ygdK 3114318 - 3114761 + | hypothetical protein TERM 3790 3114770 - 3114807 + T 100 -14.9 -3.92542 | opp_overlap 3114770 3114771, overlap 3114771 3114773 GGTTTAAGCATAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC TERM 3791 3114807 - 3114770 - T 100 -17.1 -3.59946 | opp_overlap 3114770 3114771 3114773, overlap 3114771 GGTTTAAGCATAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC TERM 3792 3114806 - 3114771 - T 100 -18.4 -2.75647 | opp_overlap 3114770 3114771 3114773, overlap 3114770 GTTTAAGCATAGAAC CGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTG ATTGTTTAACCCTGA TERM 3793 3114771 - 3114806 + T 100 -18.4 -2.95204 | opp_overlap 3114771 3114770, overlap 3114770 3114773 GTTTAAGCATAGAAC CGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTG ATTGTTTAACCCTGA TERM 3794 3114773 - 3114804 + T 100 -17.4 -3.02639 | opp_overlap 3114771 3114770, overlap 3114771 3114770 TTAAGCATAGAACCG GGTCGGATAAGACG TTCG CGTCTCATCCGACC TGATTGTTTAACCCT ygdL 3115618 - 3114812 - | putative enzyme TERM 3795 3115658 - 3115638 - R 100 -12.6 -4.93365 | opp_overlap 3115638 CCTCAGAATTAAAAA GGGTGAGG TTATC CCTCACCC TGTCGTATCCGTAAA TERM 3796 3115638 - 3115658 + r 79 -12.6 -2.8655 | opp_overlap 3115638 CCTCAGAATTAAAAA GGGTGAGG TTATC CCTCACCC TGTCGTATCCGTAAA mltA 3116792 - 3115695 - | murein transglycosylase A TERM 3797 3117307 - 3117320 + r 100 -8.1 -6.02919 | opp_overlap 3117307 CAACCAATTATTGAA CACCC TAAC GGGTG TTTTTTTGTTTCTAC TERM 3798 3117364 - 3117351 - R 88 -5.9 -5.60993 | opp_overlap 3117351 TCTCCCATAAAAAAA GCGCC ATTC AGCGC CTTTTTATCATCCCC SSON_2974 3118715 - 3117372 - | putative amidase TERM 3799 3117684 - 3117694 + g 78 -8.2 -4.25104 | opp_overlap 3117684 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTCACGCCAC TERM 3800 3120149 - 3120134 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 3118857 - 3120188 + | N-acetylglutamate synthase TERM 3801 3120243 - 3120199 - T 90 -10.8 -4.30978 | gap 2, opp_overlap 3120199 3120193, overlap 3120201 GGTAAGCGATGAAAA TCGCCGGATGCG--GCAGGCGT AAC ACTCGTGCGTCGCATCCGGCAA TTACGTTTATCCCCG TERM 3802 3120199 - 3120243 + T 73 -9.9 -3.32997 | opp_overlap 3120199 3120201, overlap 3120193 GGTAAGCGATGAAAA TCGCCGGATGCGGCAGGCG TAACACT CGTGCGTCGCATCCGGCAA TTACGTTTATCCCCG TERM 3803 3120241 - 3120201 - T 73 -11.2 -2.50381 | gap 2, opp_overlap 3120199 3120193, overlap 3120199 TAAGCGATGAAAATC GCCGGATGCG--GCAGGCGT AAC ACTCGTGCGTCGCATCCGGC AATTACGTTTATCCC RecD 3122076 - 3120250 - | exonuclease V subunit alpha TERM 3804 3120988 - 3121004 + g 79 -4.3 -5.00616 | opp_overlap 3120986 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 3805 3121780 - 3121758 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCGCC ACA GAGGATCATC GGCGTGGGTTCATCT RecB 3125618 - 3122076 - | exonuclease V subunit beta TERM 3806 3123237 - 3123262 + g 74 -8.3 -3.85817 | gap 1, overlap 3123238 CAGATCTTCCGCCAG ACGTTCGACCTC CGC GAGGTCG-ACGC TTTCTGGCGCAGCAT TERM 3807 3123238 - 3123261 + g 75 -11.8 -2.91276 | gap 1, overlap 3123237 AGATCTTCCGCCAGA CGTTCGACCTC CGC GAGGTCG-ACG CTTTCTGGCGCAGCA TERM 3808 3124577 - 3124589 + g 74 -6.2 -4.57569 | overlap 3124576 3124584 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 3809 3124700 - 3124721 + g 76 -9.3 -3.76379 | CCTCAAACAGTGGAT GTCGCGGGG TTTC CCCCCCGGC TTTCGTGCGATCTTC TERM 3810 3124765 - 3124744 - G 70 -5.8 -4.16016 | CGATCTTCTAAGAAA CGCTGGGA GAATTT TTCCAGCG ACTCCGGCAACTGAT TERM 3811 3125486 - 3125472 - G 71 -9.2 -3.53224 | CAGCGGGCGGGGAAA GGCGGC GGA ACCGCC TAGTCCAAGTAACAG TERM 3812 3125587 - 3125561 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptr 3128499 - 3125611 - | protease III TERM 3813 3126235 - 3126252 + g 72 -5.5 -4.58395 | CGCTGCCAGTGCGGA GTCGGTG CTGT TACCGGC TTTTTCAAAGATGAC TERM 3814 3127037 - 3127058 + g 81 -8.8 -4.3898 | overlap 3127025 3127024 GCTTTTTGCTGCCAG TCAGCGAA AGTTTG TTCGCTGA TTTTATCGACCTGAT TERM 3815 3127685 - 3127713 + g 84 -3.7 -5.28755 | overlap 3127680 3127686 3127693 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT TERM 3816 3128131 - 3128117 - G 70 -7.1 -4.128 | ACTTCCAGATAGAAA GCCGT GCGAT ACGGC GCAGTGCTGGCATTG recC 3132043 - 3128675 - | exonuclease V subunit gamma TERM 3817 3129064 - 3129052 - G 78 -5.5 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCACC ATTACCACCGCTGGC ppdC 3132379 - 3132056 - | hypothetical protein ygdB 3132771 - 3132364 - | hypothetical protein ppdB 3133331 - 3132768 - | hypothetical protein ppdA 3133792 - 3133322 - | hypothetical protein TERM 3818 3133955 - 3133936 - R 100 -10.7 -5.78622 | GGAGGGTAAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT thyA 3134771 - 3133977 - | thymidylate synthase TERM 3819 3134644 - 3134614 - G 72 -11.1 -3.09516 | TCGTGGATGATGGAA CGCAGGTGGCAAC GTTTA GTTGTCACCAGCG GGAATCCATCCTGCA lgt 3135653 - 3134778 - | prolipoprotein diacylglyceryl transferase ptsP 3138050 - 3135804 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 3820 3137356 - 3137396 + g 81 -10.6 -3.61398 | gap 2, opp_overlap 3137332 3137364 TCTTTTTGTGCTCCG GCGGCAAA-GCGTTT-GCTG TAG CGGCGAAACTCGTTTGCCGC TTCTTCCAGCGCCCC ygdP 3138593 - 3138063 - | dinucleoside polyphosphate hydrolase TERM 3821 3139235 - 3139250 + H 70 -2.5 -5.04249 | TACACTGCGAATATT CGGCA CATAAT TGCTG TTTGTTTTTTAACCA TERM 3822 3139531 - 3139516 - g 76 -7.6 -4.27316 | opp_overlap 3139516 3139514 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCGCT TERM 3823 3139895 - 3139907 + G 85 -6.9 -4.86731 | CGAACGGATTCTGAC GCTGC CAC GCGGC TTTTATTTGAAGAAG mutH 3139278 - 3139967 + | DNA mismatch repair protein SSON_2989 3140036 - 3140749 + | putative transport protein SSON_2990 3140887 - 3141105 + | hypothetical protein SSON_2991 3141911 - 3141198 - | IS600 ORF2 SSON_2992 3142354 - 3142052 - | IS600 ORF1 TERM 3824 3142447 - 3142472 + H 100 -9.8 -5.61596 | opp_overlap 3142447 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 3825 3142472 - 3142447 - H 72 -9.1 -3.61398 | opp_overlap 3142447 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_2993 3142462 - 3143808 + | IS4 orf TERM 3826 3143819 - 3143790 - f 89 -9.3 -4.59109 | overlap 3143792 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCATCCGGCTG TERM 3827 3143817 - 3143792 - f 100 -16.3 -3.90762 | overlap 3143790 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCATCCGGC TERM 3828 3144745 - 3144735 - g 93 -8.2 -4.82855 | opp_overlap 3144734 3144732, overlap 3144737 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATCGC SSON_2994 3143919 - 3144959 + | putative aldo-keto reductase TERM 3829 3144961 - 3144988 + T 81 -12.8 -3.13403 | opp_overlap 3144962 3144966 3144978, overlap 3144966 ATCCGGCACCATAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC TERM 3830 3144987 - 3144962 - T 100 -16.3 -3.27475 | opp_overlap 3144961 3144966, overlap 3144966 3144978 TCCGGCACCATAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 3831 3144966 - 3144983 + T 81 -12.7 -3.20348 | opp_overlap 3144966 3144962 3144978, overlap 3144961 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 3832 3144983 - 3144966 - T 85 -12.7 -3.43203 | opp_overlap 3144961 3144966, overlap 3144962 3144978 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 3833 3145025 - 3144995 - T 70 -9 -3.45571 | opp_overlap 3144998, overlap 3144978 3144989 3144998 GGCGTTAAATATTAA TGACGGCGCTGC CAGATCC ACAGCGCCGTTA TTGCCAGCGCAAACA TERM 3834 3145022 - 3144998 - T 72 -10.7 -2.8742 | opp_overlap 3144998, overlap 3144978 3144995 3144989 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG TTATTGCCAGCGCAA TERM 3835 3144998 - 3145022 + T 75 -10 -3.61398 | opp_overlap 3144978 3144998 3144995 3144989 GTTAAATATTAATGA CGGCGCTG CCAGATCCA CAGCGCCG TTATTGCCAGCGCAA ygeD 3146184 - 3144991 - | hypothetical protein TERM 3836 3145521 - 3145508 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 3148336 - 3146177 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 3837 3148449 - 3148432 - H 100 -12.7 -5.75945 | opp_overlap 3148432 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3838 3148432 - 3148449 + H 81 -12.7 -3.14132 | opp_overlap 3148432 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3839 3148652 - 3148635 - H 100 -12.7 -6.07627 | opp_overlap 3148634 3148631 3148641 ACCGGCAAAAAAAAA CCTGCGC ATCT GCGCAGG CTGGTGTAATTCATG TERM 3840 3148851 - 3148871 + H 89 -11.1 -4.18494 | opp_overlap 3148849 ACGATGAAAACACGC CGCCCCTTG AAC CAACGGGCG TTTTCCGTAACACTG galR 3148922 - 3149953 + | DNA-binding transcriptional regulator GalR lysA 3151222 - 3149960 - | diaminopimelate decarboxylase lysR 3151344 - 3152279 + | DNA-binding transcriptional regulator LysR TERM 3841 3152636 - 3152649 + T 74 -8.1 -3.94811 | GTAATTGCACGTCCG GTGGC ATCC GCCAC TTTATGCATCGTATT TERM 3842 3153037 - 3153011 - T 100 -18.8 -5.30155 | CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGACGCC araE 3154462 - 3153044 - | low-affinity L-arabinose transport system proton symport protein TERM 3843 3154519 - 3154501 - R 73 -2.4 -5.14477 | overlap 3154503 3154504 GACATAGTGAAAAAA TACGTGAA CAA CTCACACA GGTGTCAGGTCGGAA TERM 3844 3154756 - 3154739 - R 100 -12.7 -5.29782 | TACAGGTATAAAAAA CCCTGCC ATGA GGCAGGG TCATAAAAGTAAGAG kduD 3155540 - 3154779 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 3845 3155383 - 3155368 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTTGATGG kduI 3156441 - 3155605 - | 5-keto-4-deoxyuronate isomerase TERM 3846 3156487 - 3156501 + r 72 -5 -4.60797 | overlap 3156484 3156488 AATAGAAAACGATAG TGAAAC ACT GTTTCG TTTTCTCTATAAAGG TERM 3847 3156568 - 3156554 - R 71 -3.6 -4.8622 | GTGGTCAATTAAAAA TAAAAC AAT GTTTCA TTTTTAAGTTAAGGA yqeF 3157909 - 3156728 - | acetyl-CoA acetyltransferase TERM 3848 3157996 - 3157983 - H 84 -5.3 -5.41746 | AATTGTTTAAAAAAA GTGAT TTTT ATCAC AAAGGAAATATGCCT TERM 3849 3158205 - 3158188 - g 74 -8.5 -3.90922 | ATTTGGTCTAAAGAA GAAACTC TGTG GAGTTTC GCGCTCTACGGCACA SSON_3005 3158164 - 3159393 + | putative transporter protein TERM 3850 3159403 - 3159440 + F 100 -16.7 -4.8083 | gap 1, overlap 3159396 3159404 AGCTAATATCCGTTG TGG-ATGGTTCAAAATTG CTA CAATTTTGAACCATTCCA TTTTTCATAATATTC TERM 3851 3159404 - 3159438 + F 100 -18.2 -2.67364 | overlap 3159396 3159403 GCTAATATCCGTTGT GGATGGTTCAAAATTG CTA CAATTTTGAACCATTC CATTTTTCATAATAT TERM 3852 3160463 - 3160449 - g 72 -4.3 -4.64861 | overlap 3160445 GGGTGGTAAAATAAA CGAAT TATTT ATTCG TTCACATTCGGTCCA yqeH 3159793 - 3160485 + | hypothetical protein TERM 3853 3160520 - 3160545 + T 93 -10.5 -4.42386 | ATCATACTCTGTTCA TACGGGCATCT ATTG AAATGCCCGTA TTTTATAAATAAGCA TERM 3854 3160953 - 3160976 + T 74 -3.8 -5.00884 | TCTACTTGAAGCTTT TCCTGATGTG GTTG CACAACAAGA TTTTTTCACCAGAGT SSON_3008 3161645 - 3161142 - | IS1 ORF yqeJ 3162385 - 3162879 + | hypothetical protein ygeF 3163883 - 3164320 + | hypothetical protein TERM 3855 3164779 - 3164789 + G 71 -2.6 -4.95896 | opp_overlap 3164771 3164779, overlap 3164773 3164770 TAACGGACGCAGAAA TTTA TTA TAAA TTTTTGTGCATTTAT ygeG 3164598 - 3165089 + | hypothetical protein SSON_3012 3165971 - 3166336 + | insertion sequence 2 OrfA protein SSON_3014 3168520 - 3167033 - | hypothetical protein SSON_3013 3166294 - 3167199 + | insertion element IS2 transposase InsD TERM 3856 3167395 - 3167428 + gT 78 -6.1 -4.55887 | gap 1, opp_overlap 3167395, overlap 3167359 3167406 TTGCAGGATAAATAA CATTA-AGTAAAGCCG CAT CGGCTTCTCTGTAATG TTTATCTTTTTCCAG TERM 3857 3167428 - 3167395 - GT 77 -8.3 -4.11183 | gap 1, opp_overlap 3167359 3167395 3167406 TTGCAGGATAAATAA CATTA-AGTAAAGCCG CAT CGGCTTCTCTGTAATG TTTATCTTTTTCCAG SSON_3016 3169586 - 3168831 - | putative lipoprotein TERM 3858 3168938 - 3168952 + g 76 -4.2 -5.00884 | opp_overlap 3168914 3168910 ATGCCGCATCCGTGC TCCCCA TAG TGGCGA TTTTTTGCCCAGCCT TERM 3859 3170187 - 3170205 + G 72 -4.5 -4.65895 | overlap 3170189 GAACAAGCCAGAAGT TTGCCGG GCGTA CTGGCGA TTTTTACCTGGGAAG TERM 3860 3170299 - 3170279 - g 78 -8.3 -4.25658 | overlap 3170276 ACTTGACGAAAACAA GCGCGAT ACCGCCG ATCGCGC ACTGCTAACTCGCCA TERM 3861 3171602 - 3171635 + G 77 -10.3 -3.61398 | gap 1, overlap 3171604 3171605 CTCACGCCAGAGCTA TGTTGCCGCGCCTGCG CTG CGCAG-TGCGGCACTA TTATTAAAAGAGAAA TERM 3862 3171604 - 3171633 + G 76 -10.7 -3.38812 | gap 1, overlap 3171602 3171605 CACGCCAGAGCTATG TTGCCGCGCCTGCG CTG CGCAG-TGCGGCAC TATTATTAAAAGAGA TERM 3863 3171605 - 3171632 + G 84 -14.2 -2.63073 | gap 1, overlap 3171604 3171602 ACGCCAGAGCTATGT TGCCGCGCCTGCG CTG CGCAG-TGCGGCA CTATTATTAAAAGAG TERM 3864 3171693 - 3171652 - g 80 -5.2 -4.91977 | gap 1, overlap 3171683 TATTAAAAGAGAAAA TCATCGCTCAC-GCCGCAG TCATG CTACATCAGTCAGCGATGA ATCTGACCCTGATAA SSON_3017 3170040 - 3172298 + | xanthine dehydrogenase subunit XdhA TERM 3865 3172384 - 3172362 - g 70 -9.8 -3.16564 | TGCCGATGCCATCAA CCTGCTGGCT GAC AACCCGCAGG CCAAACTGCTCGCCG ygeT 3172309 - 3173187 + | xanthine dehydrogenase subunit XdhB SSON_3019 3173184 - 3173663 + | xanthine dehydrogenase subunit XdhC TERM 3866 3173697 - 3173666 - T 93 -10.8 -4.5528 | opp_overlap 3173671, overlap 3173667 3173671 GAAAACGAAGTAAAA GGATATCCGGCCTG AATT CAGGCCGGATTCAC TGAGGTTATGTGTTT TERM 3867 3173695 - 3173667 - T 90 -14 -3.31541 | gap 1, opp_overlap 3173671, overlap 3173666 3173671 AAAACGAAGTAAAAG GATATCCGGCCTG AATT CAGGCCGGAT-TC ACTGAGGTTATGTGT TERM 3868 3173692 - 3173671 - T 100 -15.9 -3.14708 | opp_overlap 3173671, overlap 3173667 3173666 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG TERM 3869 3173671 - 3173692 + T 93 -15.9 -3.08471 | opp_overlap 3173671 3173667 3173666 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG ygeV 3175481 - 3173703 - | putative transcriptional regulator TERM 3870 3175783 - 3175773 - H 71 -6.8 -4.07877 | GTATTTTACAAACAA CCAG AAG CTGG CATCAATTTGTGAAC TERM 3871 3176105 - 3176095 - g 75 -6.8 -4.30576 | GCCGCAGCATTAAAA GCAC TGC GTGC TGAAAACATCTCAAC TERM 3872 3176276 - 3176252 - g 70 -6.3 -4.15328 | AAGGCAAATCACAAA TCGCTCACGGC GAA ACCGTGCGTGA AACCGCCAATATGAT TERM 3873 3176564 - 3176528 - g 91 -3 -5.58209 | overlap 3176530 TGAAAGGTAAAAAAA TCGCCATGACCTGG GCCTACTCT CCAAGCTATGGCAA ACCGCTCTCTGTACC ygeW 3176029 - 3177147 + | hypothetical protein TERM 3874 3177154 - 3177175 + F 86 -13.7 -3.24232 | overlap 3177152 GTGAAATAACCCCTC GGGCCGATC TGCT GGTCGGCCC TCTATTTCCAGAGGC TERM 3875 3177493 - 3177481 - g 70 -4.9 -4.57569 | opp_overlap 3177489 TTATTGTGTGAAAAA TATCA TCT TGATA TCGAAACGCTGTCAT ygeX 3177205 - 3178401 + | diaminopropionate ammonia-lyase ygeY 3178459 - 3179670 + | peptidase TERM 3876 3179688 - 3179707 + F 100 -15 -4.71482 | ACTCTTCACTTATTC CCCTCCGG TTCG CCGGAGGG TTTTTGGAGTTTGCT TERM 3877 3181491 - 3181467 - g 70 -5.8 -4.24342 | gap 1 CGGGGCATTAATAAA CCTGTAGCAAC GCTG GTTACT-CAGG TCGAAGTCGACGCTA yqeA 3181155 - 3182087 + | carbamate kinase TERM 3878 3182093 - 3182120 + T 93 -10.5 -4.54727 | overlap 3182094 TTGTCAGTAATTTTA AGGCCGGGTGG GTAATA CCATCCGGCCA TTTTCATTTAAGCCA TERM 3879 3182094 - 3182119 + T 90 -14 -3.32354 | overlap 3182093 TGTCAGTAATTTTAA GGCCGGGTGG GTAATA CCATCCGGCC ATTTTCATTTAAGCC SSON_3026 3183753 - 3182128 - | putative synthases TERM 3880 3182259 - 3182232 - G 72 -7.8 -3.96148 | gap 1, opp_overlap 3182231 3182232, overlap 3182243 GGGCTTTATCAGAAA CGCTGGTGAAATC AGC GGTTTCACCA-CG AGGATCGATATCACC SSON_3027 3184508 - 3183801 - | hypothetical protein TERM 3881 3183944 - 3183931 - G 74 -3.1 -4.89852 | overlap 3183932 TCACATTGAGAAAAA CGGTT AATG AACCA GACTCGCCGACAACC TERM 3882 3183995 - 3183978 - G 71 -9.1 -3.54424 | gap 1 CGGTACGTTTTTAAA CGCC-CCC TGA GGGTGGCG AACCAGCGCAACGAG TERM 3883 3184134 - 3184144 + g 72 -6.8 -4.2349 | opp_overlap 3184126 3184133 CATCACAGCAATCAC GCAG CAA CTGC TTTTGGGTATGCAAG ygfJ 3184674 - 3185252 + | hypothetical protein TERM 3884 3187365 - 3187394 + T 89 -9.3 -4.59109 | overlap 3187367 ATTCCTCAGTTCCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3885 3187367 - 3187392 + T 100 -16.3 -3.90762 | overlap 3187365 TCCTCAGTTCCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_3030 3188722 - 3187376 - | IS4 orf TERM 3886 3188712 - 3188737 + g 73 -9.1 -3.61398 | opp_overlap 3188712 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 3887 3188737 - 3188712 - G 100 -9.8 -5.61596 | opp_overlap 3188712 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC SSON_3031 3189522 - 3188809 - | IS600 ORF2 SSON_3032 3189965 - 3189663 - | IS600 ORF1 TERM 3888 3191795 - 3191805 + G 81 -6.8 -4.62471 | GGTCGCTCTCCACAT TGCG CGA CGCA TTTTTAAAAGTTGGC SSON_3033 3191380 - 3192708 + | putative chlorohydrolase/aminohydrolase TERM 3889 3192743 - 3192717 - f 73 -10.8 -3.08467 | opp_overlap 3192719 GGCATAAATGACAGA TGCCCTCTTCCC GCA GGGAAGAGGGTT AAATAAGGAAAGAAG TERM 3890 3192719 - 3192741 + F 100 -17.8 -3.05384 | opp_overlap 3192717 CATAAATGACAGATG CCCTCTTCCC GCA GGGAAGAGGG TTAAATAAGGAAAGA TERM 3891 3192983 - 3192995 + G 72 -6.9 -4.24342 | TCGCTTGCAGCCACT GCGTG ATG CGCGC TTTATTCCTGCAGCA TERM 3892 3193098 - 3193140 + G 72 -5.4 -4.56597 | overlap 3193099 GCCCGGCAGGAAGAG TCAGTGCTGCTTCCCGTCCT GCT AGCACTGGATGCTGAACTGG TTTTTGGCAACGGCG SSON_3034 3192759 - 3193538 + | putative selenate reductase subunit YgfM SSON_3035 3193619 - 3196474 + | putative selenate reductase subunit YgfN SSON_3036 3196296 - 3196721 + | hypothetical protein SSON_3037 3196757 - 3197008 + | hypothetical protein TERM 3893 3197170 - 3197145 - T 77 -11.1 -3.1352 | opp_overlap 3197146, overlap 3197143 3197141 GGGCAATCTAATAGA TTCTCCGCGCC TTTC AGCGCGGAGAT TTCTTTCACAGAGGA TERM 3894 3197146 - 3197169 + T 100 -13.9 -4.41348 | opp_overlap 3197145 3197143 3197141 GGCAATCTAATAGAT TCTCCGCGC CTTTCA GCGCGGAGA TTTCTTTCACAGAGG ygfS 3197667 - 3197176 - | putative oxidoreductase, Fe-S subunit ygfT 3199598 - 3197664 - | putative oxidoreductase Fe-S binding subunit TERM 3895 3199099 - 3199112 + g 78 -8.1 -4.30844 | CTGCGAGATGGCTGA GCGTC TGAT GACGC TTTTCCTGCTGCCGT SSON_3040 3200653 - 3199622 - | IS630 orf TERM 3896 3199668 - 3199687 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 3199680 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG ygfU 3201105 - 3202622 + | putative permease SSON_3042 3202872 - 3203420 + | isopentenyl-diphosphate delta-isomerase TERM 3897 3203442 - 3203425 - T 100 -10.5 -5.33848 | opp_overlap 3203425 AGCACAATTAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAACGT lysS 3204980 - 3203463 - | lysyl-tRNA synthetase TERM 3898 3206131 - 3206157 + r 100 -11.7 -5.24129 | gap 1, opp_overlap 3206131 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG TERM 3899 3206157 - 3206131 - R 82 -11.7 -3.30903 | gap 1, opp_overlap 3206131 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG recJ 3207912 - 3206179 - | ssDNA exonuclease RecJ TERM 3900 3207313 - 3207301 - G 70 -4.7 -4.58395 | CTGATCGCGCAAAAA GGTGC GCA GCGCC AGCATCAGATAAAAC dsbC 3208628 - 3207918 - | thiol:disulfide interchange protein DsbC TERM 3901 3208121 - 3208131 + g 84 -4 -5.19879 | CTGCCATCACATCAT CAAA CGC TTTG TTTTTATCTTTCGCA xerD 3209549 - 3208653 - | site-specific tyrosine recombinase XerD fldB 3209661 - 3210182 + | flavodoxin FldB TERM 3902 3210189 - 3210218 + T 72 -8.5 -3.77188 | TACGCCTGATCTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TCTTTATCTTTGCGT SSON_3049 3210629 - 3210222 - | hypothetical protein ygfY 3210876 - 3210610 - | hypothetical protein ygfZ 3211119 - 3212099 + | putative global regulator TERM 3903 3212255 - 3212268 + T 76 -8.1 -4.09685 | opp_overlap 3212212, overlap 3212253 3212252 TCCGATGCCTGATGC GACGC TGAC GCGTC TTTTCAGGCCTACAA SSON_3052 3212954 - 3212295 - | putative oxidoreductase TERM 3904 3212420 - 3212408 - G 70 -4.1 -4.64844 | TGCAGACATAGAAAA TCACT CCG AGCGA ATAAACCACGCCGCC yqfB 3213429 - 3213118 - | hypothetical protein bglA 3213468 - 3214907 + | 6-phospho-beta-glucosidase A, cryptic TERM 3905 3214947 - 3214917 - T 74 -10.6 -3.18681 | gap 1, opp_overlap 3214911, overlap 3214920 CTTTAAGTCGATGAA GTACCGGATGCAA TACTTG TTGCATCCGGT-C AGACAACTTCCCTGT TERM 3906 3214945 - 3214920 - T 82 -13.4 -2.79023 | opp_overlap 3214911, overlap 3214917 TAAGTCGATGAAGTA CCGGATGCAA TACTTG TTGCATCCGG TCAGACAACTTCCCT ygfF 3215707 - 3214964 - | hypothetical protein TERM 3907 3215584 - 3215603 + g 75 -5 -4.75219 | gap 1, overlap 3215584 TGATTAAGTTCACCA CTTCC-TGC GCC GCATGGAGG TTTTGTTGATAATTA TERM 3908 3215934 - 3215947 + r 75 -9.5 -3.56092 | opp_overlap 3215934 TCATCTGACTAAAAA GGCGC CGAA GCGCC TTTAGAAAATAGTCG TERM 3909 3215947 - 3215934 - R 100 -9.5 -4.7373 | opp_overlap 3215934 TCATCTGACTAAAAA GGCGC CGAA GCGCC TTTAGAAAATAGTCG gcvP 3218846 - 3215973 - | glycine dehydrogenase gcvH 3219354 - 3218965 - | glycine cleavage system protein H gcvT 3220472 - 3219378 - | glycine cleavage system aminomethyltransferase T TERM 3910 3220667 - 3220655 - R 74 -3.3 -5.03314 | CTTATGGTTAAAAAA CGCCA AAA TCGCG ACAGAATAAAAAACC TERM 3911 3220798 - 3220788 - R 79 -2.6 -5.40004 | overlap 3220794 CACTAAATCAAAAAA TAAT GAC ATTA GAAAATATAATGCGA TERM 3912 3220875 - 3220852 - R 93 -10.3 -4.39386 | overlap 3220846 TTCAAATGAGGAAAA TCTCCCGGC GAAAAA ACCGGGAGA TGAAAGTGTGATGGG visC 3222121 - 3220919 - | hypothetical protein TERM 3913 3221521 - 3221533 + g 73 -9.1 -3.67775 | opp_overlap 3221509 AAACCTGCCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 3223322 - 3222144 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3224644 - 3223319 - | proline aminopeptidase P II TERM 3914 3224577 - 3224563 - G 75 -5.6 -4.72272 | opp_overlap 3224563 3224567, overlap 3224564 3224566 3224567 CTGGTGCAGCAAAAA TCAGCG CGG CGCTGC CGGGTTGCATTTGCT TERM 3915 3224576 - 3224564 - G 71 -9.1 -3.43042 | opp_overlap 3224563 3224567, overlap 3224563 3224566 3224567 TGGTGCAGCAAAAAT CAGCG CGG CGCTG CCGGGTTGCATTTGC ygfB 3225248 - 3224670 - | hypothetical protein TERM 3916 3225642 - 3225623 - g 77 -3.4 -5.08601 | overlap 3225630 TTAGCGCAAGAAAAA GCGAAGAC TCGT GACTACGC GGCAAGTATGGAACA ygfE 3225416 - 3225745 + | Z-ring-associated protein TERM 3917 3226416 - 3226439 + G 74 -3 -4.91109 | overlap 3226417 3226420 CTTTGATGAGTACGG TCAGCGCCTG GGAA TGGGCGGTGG TTTTTATGATCGGAC ygfA 3226045 - 3226593 + | putative ligase TERM 3918 3226770 - 3226789 + T 86 -11.4 -3.66178 | ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 3919 3227013 - 3226973 - T 78 -6.2 -4.7254 | gap 2, opp_overlap 3226966 3226974 3226983, overlap 3226974 3226975 AGTGGCTATCAAAAA GTTCGGTTCAGGGCGATGCA CCC CGCATCGCCCTGATT-G-AC ATCGTTGATTCTTTG TERM 3920 3226983 - 3227005 + T 86 -14.9 -2.74488 | opp_overlap 3226975 3226973 3226974, overlap 3226974 3226966 AAAAAGTTCGGTTCA GGGCGATGC ACCCC GCATCGCCC TGATTGACATCGTTG TERM 3921 3227160 - 3227179 + T 86 -11.4 -3.66178 | overlap 3227173 ACCCTTCTCCTTTAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 3922 3227324 - 3227354 + T 76 -8.2 -4.07568 | opp_overlap 3227328, overlap 3227328 TGGAGAAGGGATAAA AAAACGGGCAAGTC AGT GACCTGCCCGTTAA TTTTCAGAGAAGGGG TERM 3923 3227350 - 3227328 - T 100 -15.6 -5.66684 | opp_overlap 3227324 3227328 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA TERM 3924 3227328 - 3227350 + T 95 -13.4 -3.66908 | opp_overlap 3227328, overlap 3227324 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA serA 3228604 - 3227372 - | D-3-phosphoglycerate dehydrogenase TERM 3925 3228036 - 3228049 + g 72 -4.5 -4.70515 | overlap 3228035 3228037 TGTACCTGAGTGGCG TTGCC CAGC GGCAG TTTGTTTTCAATATC TERM 3926 3228689 - 3228671 - R 79 -3.2 -5.27399 | overlap 3228674 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCGA TERM 3927 3228686 - 3228674 - R 72 -4.9 -4.69962 | overlap 3228671 CATATCAAAAAATAA TATTG CGG CAATA TGAACGTTTGCGTCG TERM 3928 3228833 - 3228859 + r 77 -11.6 -2.91873 | opp_overlap 3228826 3228824, overlap 3228830 AATGAAGAGAATTTT TTTAACGGGGGA GGT TCCCCCGTCAGA TCATTTCACAATGGT rpiA 3229519 - 3228860 - | ribose-5-phosphate isomerase A TERM 3929 3228946 - 3228968 + g 72 -7 -4.20531 | AGCCAACAGTCACCA CGCCAGGAAT CGC ATTTATGGCG TTTTCCATCGCTATC TERM 3930 3230167 - 3230144 - g 72 -4.4 -4.70626 | overlap 3230146 GAACAAGGGCAAAAA CTGCTGGCAC TGCT GCGCCAGGTG GAGTTGCTGGAAGAA iciA 3229949 - 3230842 + | chromosome replication initiation inhibitor protein TERM 3931 3230880 - 3230852 - f 76 -9 -3.80114 | opp_overlap 3230855 3230856, overlap 3230855 3230856 GATTAATCCATCAAA TAATGCCTGATA GCACA TATCAGGCGTTA TCCTCACTTCTTTTT TERM 3932 3230876 - 3230856 - f 70 -9.8 -3.0082 | opp_overlap 3230856 3230855, overlap 3230855 3230852 AATCCATCAAATAAT GCCTGATA GCACA TATCAGGC GTTATCCTCACTTCT TERM 3933 3231518 - 3231539 + G 74 -5.9 -4.57353 | gap 1, overlap 3231517 GATGACCATGAATGG CG-CAGTGCT ACC AGTACTGGCG TTTTATATCGTCGCC TERM 3934 3231915 - 3231925 + G 70 -6.8 -4.06419 | AACGTCGCCATGTTG CGTG CGG CACG TTATTTATGGAGCGA sbm 3231045 - 3233189 + | methylmalonyl-CoA mutase TERM 3935 3233520 - 3233532 + G 72 -6.9 -4.1552 | opp_overlap 3233511, overlap 3233521 GAATGACCTGGCGCG TGCCG AGG CGGCG TTTATTCGCCCGGTA ygfD 3233182 - 3234177 + | arginine/ornithine transport system ATPase ygfG 3234188 - 3234973 + | methylmalonyl-CoA decarboxylase ygfH 3234997 - 3236475 + | putative coenzyme A transferase TERM 3936 3236476 - 3236532 + T 80 -12.6 -3.0682 | TCGATGCTGGGTTAA TGGTTTGTCCCGTCACGAT-CTTCAGCA ATA TGCTGAAGCATCGTGGCGGTATAA-CGA TGATTTCTGATTGAA SSON_3072 3237609 - 3237106 - | IS1 ORF TERM 3937 3238037 - 3238062 + r 77 -3.9 -5.24129 | opp_overlap 3238043, overlap 3238038 CGCGGCAATGCTTTT ACCAAATGGCG AAGC CGTCATATGGA TTTTTTCTGCCGCCC TERM 3938 3238278 - 3238308 + r 79 -10.5 -3.50808 | gap 1, opp_overlap 3238267 3238277 3238276 3238280, overlap 3238276 AATATCGGGTAAAGG CAT-TAGCCCGACG AATA CGTCGGGCTACAAG TATTATTGTGCTGCA TERM 3939 3238305 - 3238280 - R 81 -13.3 -2.64472 | opp_overlap 3238278 3238276, overlap 3238267 3238277 3238276 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAGTATTATTGTGCT yggE 3239051 - 3238311 - | hypothetical protein yggA 3239779 - 3239144 - | arginine exporter protein TERM 3940 3239909 - 3239884 - R 82 -11.9 -3.31932 | opp_overlap 3239882, overlap 3239882 ATAACTAATAAGAGA GAGGCCAGAGA GTAT TATCTGGCCTC AGCGTTGATTACGCA yggB 3240778 - 3239918 - | mechanosensitive channel MscS TERM 3941 3240943 - 3240927 - R 100 -9.3 -5.00616 | overlap 3240928 CTTTTGGCGAAAAAA TCCCCGC AGA GCGGGGC TCAGACAGATATCAA TERM 3942 3240942 - 3240928 - R 88 -12.8 -3.60048 | overlap 3240927 TTTTGGCGAAAAAAT CCCCGC AGA GCGGGG CTCAGACAGATATCA TERM 3943 3241036 - 3241013 - R 76 -4.7 -4.82901 | gap 1 TCCGGCCTACAAAAA CCTGCAA-AT TCAAT ATATTGCAGG ATACGTGTAGGCCTG TERM 3944 3241111 - 3241095 - R 100 -11.5 -5.40072 | TTTTGGCGAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fba 3242215 - 3241136 - | fructose-bisphosphate aldolase TERM 3945 3241338 - 3241359 + g 70 -3.7 -4.7254 | TCCCAGGTTGCCCAT TGGGTATCG GTAT CGATGTTCA TTTTTACTACGCCGT TERM 3946 3242395 - 3242375 - R 75 -3.1 -5.20216 | overlap 3242376 TAGAGTATGAAAAAA TGCGTGCTC TAA AAGCGCGCT GAAACAAGGGCAGGT TERM 3947 3242399 - 3242425 + r 90 -7.3 -5.37865 | gap 1, opp_overlap 3242403, overlap 3242400 3242403 TAAAAGCGCGCTGAA ACA-AGGGCAGG TTTC CCTGCCCTGTGA TTTTTTACTTCTTAG TERM 3948 3242400 - 3242424 + r 83 -10.8 -3.81092 | gap 1, opp_overlap 3242403, overlap 3242399 3242403 AAAAGCGCGCTGAAA CA-AGGGCAGG TTTC CCTGCCCTGTG ATTTTTTACTTCTTA TERM 3949 3242420 - 3242403 - R 95 -12.7 -3.90922 | opp_overlap 3242400 3242399 3242403 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT TERM 3950 3242403 - 3242420 + r 81 -12.7 -3.27687 | opp_overlap 3242403, overlap 3242400 3242399 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT pgk 3243593 - 3242430 - | phosphoglycerate kinase epd 3244662 - 3243643 - | erythrose 4-phosphate dehydrogenase TERM 3951 3245087 - 3245106 + G 74 -2.8 -5.02074 | gap 1, overlap 3245089 CTTTTATGCACTGCG CCTCCT-CC CCG GGCAGGAAG TTTTTTCCCAGCTAC SSON_3080 3245034 - 3245465 + | hypothetical protein TERM 3952 3245719 - 3245768 + G 71 -9.3 -3.51411 | gap 2, overlap 3245716 GCCGCCGCATTTGCA CCCG-TCGCGATGGTCA-TCGGC CTGGTC GCCGGTTGGCTGGCGCGAGCGGG TTGGTTTCGCACCCT SSON_3081 3245488 - 3246066 + | putative inner membrane protein SSON_3082 3246067 - 3246774 + | hypothetical protein SSON_3083 3246762 - 3247439 + | putative ATP-binding protein of ABC transport system TERM 3953 3247661 - 3247648 - g 78 -5.2 -4.7657 | opp_overlap 3247659, overlap 3247650 GAAAAACCTGAAAAA CCGC CAGCGC GCGG CAAAGGTTGGCGTAC TERM 3954 3248014 - 3248037 + G 81 -9.6 -4.11805 | opp_overlap 3248010 GGTAGCAATCAGTCA TGACGCCG CATTTACC CGGCGTCA TTTCTCTCGTGTGGT SSON_3084 3247433 - 3248110 + | putative ATP-binding protein of ABC transport system frcK 3248795 - 3248082 - | putative fructose transport system kinase SSON_3086 3249120 - 3249626 + | IS1 ORF cmtB 3251104 - 3250661 - | putative mannitol phosphotransferase subunit EIIA TERM 3955 3251398 - 3251383 - R 100 -10.4 -5.5074 | opp_overlap 3251383 CAAGGTAATAAAAAA GGTCGC CGAA GCGACC TTTTTACCCGAAATG TERM 3956 3251383 - 3251398 + r 93 -10.4 -4.57073 | opp_overlap 3251383 CAAGGTAATAAAAAA GGTCGC CGAA GCGACC TTTTTACCCGAAATG tktA 3253409 - 3251418 - | transketolase TERM 3957 3253104 - 3253120 + g 83 -10.1 -4.13945 | opp_overlap 3253103, overlap 3253105 AGCGGTATAACCTAC TTCCGGG TGG CCCGGAG TTTTAGAGTGCAGCT TERM 3958 3253105 - 3253119 + g 75 -11.4 -3.08046 | opp_overlap 3253103, overlap 3253104 GCGGTATAACCTACT TCCGGG TGG CCCGGA GTTTTAGAGTGCAGC yggG 3253561 - 3254445 + | hypothetical protein speB 3255508 - 3254588 - | agmatinase TERM 3959 3255141 - 3255131 - G 72 -6.8 -4.1822 | overlap 3255132 CGGCAGCGTAACAAA GTGG TCA CCAC CGAAGGTGAGCATAC TERM 3960 3255468 - 3255456 - G 77 -3.4 -5.03314 | opp_overlap 3255462 3255465, overlap 3255463 GGCAGGCGTAAAAAA CCAA AGGCA TTGG AAACCAGTGAGTTAT TERM 3961 3255576 - 3255544 - R 100 -14.9 -5.71712 | opp_overlap 3255539 3255544 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGTCACAA TERM 3962 3255544 - 3255576 + r 93 -14.9 -3.32997 | opp_overlap 3255544, overlap 3255539 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGTCACAA speA 3257622 - 3255646 - | arginine decarboxylase TERM 3963 3255951 - 3255941 - G 81 -6.8 -4.59342 | overlap 3255943 CCGACCATAAAGAAA CCGA GCA TCGG CGGATTCTCTGGATC yqgB 3257777 - 3257631 - | hypothetical protein TERM 3964 3257839 - 3257822 - H 81 -8.5 -4.52703 | opp_overlap 3257812 3257834, overlap 3257812 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC TERM 3965 3258078 - 3258102 + G 79 -2.2 -5.27335 | gap 1, overlap 3258082 ACCCGGCTGGAAGTG GCAACACGA AAGAAACG TCGTGT-GC TTTTTATTTAAGCCG yqgC 3257898 - 3258113 + | hypothetical protein TERM 3966 3258116 - 3258126 + T 79 -8.2 -4.36914 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA yqgD 3258361 - 3258110 - | hypothetical protein TERM 3967 3258893 - 3258881 - g 91 -9.1 -4.59853 | TGAAGTGCGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 3968 3259492 - 3259480 - g 72 -5.5 -4.57482 | opp_overlap 3259480 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGTGA TERM 3969 3259557 - 3259528 - g 74 -2.7 -5.00616 | gap 1, overlap 3259536 TCCCGTGGGAAAAAA CCGACAAAGCGCAG CTG CTGCGCGATG-CTG CCGGTCTGAAGTAAT TERM 3970 3259550 - 3259536 - g 91 -11.4 -4.11869 | overlap 3259528 GAAAAAACCGACAAA GCGCAG CTG CTGCGC GATGCTGCCGGTCTG metK 3258417 - 3259571 + | S-adenosylmethionine synthetase TERM 3971 3259594 - 3259612 + F 100 -11.7 -5.48213 | opp_overlap 3259594 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 3972 3259612 - 3259594 - f 86 -11.7 -3.53444 | opp_overlap 3259594 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 3973 3259926 - 3259945 + F 78 -6.5 -4.68994 | overlap 3259906 GTAAGCGATTACACT GATGTGA TTTGCT TCACATC TTTTTACGTCGTACT TERM 3974 3260973 - 3260958 - g 72 -6.8 -4.25104 | CGCTGGGGACGAAAA CCAACG CTAA CGCTGG GCTTCCTGGTGATGG galP 3260007 - 3261401 + | galactose-proton symport of transport system TERM 3975 3261661 - 3261686 + G 75 -5.5 -4.63486 | ATCCGCCTCAATCCC GTTTTGCTGTT GGAA AACAGTGAAGC TTTTATTGAAGAAGT sprT 3261478 - 3261975 + | hypothetical protein TERM 3976 3262566 - 3262550 - g 87 -4.3 -5.28942 | opp_overlap 3262565, overlap 3262562 GATTTCAAAGAAAAA GCTGCCG AAC CACCAGC GCGTGCACGCGGTGC endA 3262070 - 3262777 + | DNA-specific endonuclease I TERM 3977 3262825 - 3262847 + F 72 -4.7 -4.71061 | opp_overlap 3262826, overlap 3262826 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT yggJ 3262857 - 3263591 + | hypothetical protein TERM 3978 3264493 - 3264513 + G 74 -11.2 -3.1552 | opp_overlap 3264491, overlap 3264491 AGATTGAAGCAGAGT TTCCGGTG TCGAT CACCGGAA TGTTAATGGATGCCA gshB 3263604 - 3264554 + | glutathione synthetase TERM 3979 3264591 - 3264631 + F 70 -2.3 -5.00616 | TCGTTGAGACTCTGA GTGACAGCGCCCTTCTTTC CAC GCATACTGGGCGCTGTTGC TTTTTTGAACCAGGA yqgE 3264663 - 3265226 + | hypothetical protein TERM 3980 3265597 - 3265580 - g 76 -7.7 -4.15044 | opp_overlap 3265593 CGGGCGCTCAACAAA GGCAAAG TCGA CTCTGCC TCTGCGGTTATTATT yqgF 3265226 - 3265642 + | Holliday junction resolvase-like protein TERM 3981 3265734 - 3265767 + TF 79 -8.2 -4.30933 | opp_overlap 3265744 3265754, overlap 3265735 3265750 GTGGCAGCGATTGTA GGTCTGATAAGACG CGCAAA CGTCTCATCAGACG TTTATTGCCTTTGTA TERM 3982 3265735 - 3265766 + TF 79 -11.7 -3.17475 | opp_overlap 3265744 3265754, overlap 3265734 3265750 TGGCAGCGATTGTAG GTCTGATAAGACG CGCAAA CGTCTCATCAGAC GTTTATTGCCTTTGT yggR 3266842 - 3265817 - | putative protein transport TERM 3983 3266864 - 3266885 + GH 83 -12.3 -3.28791 | GGGACAAAATCTCAG CGGCTGCAA CGCG TTGCGGCCG TTCTCCAGAAGAAAT TERM 3984 3266948 - 3266929 - gH 83 -5.7 -5.13722 | overlap 3266930 GTCAGTAAAACAAAA CCTGCGA GCGCCA TCGCAGA AGCCATTGATGCCGG TERM 3985 3267095 - 3267083 - gH 72 -4.7 -4.65916 | opp_overlap 3267086, overlap 3267050 3267084 TGCAGTCTAATAAAA GCCGC CTG GTGGC AGAGCATTTCGACTG TERM 3986 3267455 - 3267442 - gH 71 -9.5 -3.14468 | TCGGACGATATGGAA GCCGC CATT GCGGC AGGTAGCACGATGGT yggS 3266815 - 3267519 + | hypothetical protein yggT 3267537 - 3268103 + | putative resistance protein TERM 3987 3268325 - 3268310 - g 70 -3.9 -4.65895 | GTGGTGATTGAAAAA GGCGA ACTTGG CCGCC ACAAACAAATTAAAA yggU 3268100 - 3268390 + | hypothetical protein TERM 3988 3268634 - 3268657 + G 77 -10.2 -3.65046 | overlap 3268626 AGATGCGCTGGGTGG CGCGCCGGGT ATTT ACTCCGCGCG TTATTCCGGTGAAGA yggV 3268398 - 3268991 + | putative deoxyribonucleotide triphosphate pyrophosphatase yggW 3268984 - 3270120 + | coproporphyrinogen III oxidase TERM 3989 3270120 - 3270151 + F 79 -8.8 -4.17316 | opp_overlap 3270121 3270124 3270128, overlap 3270121 3270124 3270128 ATTCCTCGCTGAGTA ATCATTAATGCGCC TGCG GGCGCATTAATCAC TTCTTTTCCCCCCGT TERM 3990 3270150 - 3270121 - f 81 -12.3 -3.14132 | opp_overlap 3270121 3270120 3270124 3270128, overlap 3270124 3270128 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTCCCCCCG TERM 3991 3270121 - 3270150 + F 80 -12.3 -3.09908 | opp_overlap 3270121 3270124 3270128, overlap 3270120 3270124 3270128 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTCCCCCCG TERM 3992 3270124 - 3270147 + F 83 -14 -2.75865 | opp_overlap 3270121 3270124 3270128, overlap 3270121 3270120 3270128 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTCCCC TERM 3993 3270147 - 3270124 - f 84 -14 -2.77899 | opp_overlap 3270124 3270121 3270120 3270128, overlap 3270121 3270128 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTCCCC TERM 3994 3270143 - 3270128 - f 74 -10.4 -3.29096 | opp_overlap 3270128 3270124 3270121 3270120, overlap 3270124 3270121 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT TERM 3995 3270128 - 3270143 + F 74 -10.4 -3.26842 | opp_overlap 3270124 3270121 3270128, overlap 3270124 3270121 3270120 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT SSON_3110 3270431 - 3270661 + | hypothetical protein TERM 3996 3270787 - 3270797 + G 78 -5.4 -4.74801 | overlap 3270784 AGATCAGGCTCACTT CAAC AAA GTTG TTTTTGGTGAAGTTG SSON_3111 3270665 - 3271417 + | putative dicarboxylate-binding periplasmic protein TERM 3997 3271444 - 3271420 - f 73 -9.9 -3.38812 | opp_overlap 3271421 3271424, overlap 3271418 3271421 CGCTGCTCAATAATA TTCCGGGCCAG TCT CTGGCCCTGAT TTTCCAAGATGCTTA TERM 3998 3271443 - 3271421 - f 81 -13.4 -2.63073 | opp_overlap 3271421 3271424, overlap 3271420 3271418 GCTGCTCAATAATAT TCCGGGCCAG TCT CTGGCCCTGA TTTTCCAAGATGCTT TERM 3999 3271421 - 3271443 + F 95 -13.4 -4.10429 | opp_overlap 3271420 3271418 3271421, overlap 3271424 GCTGCTCAATAATAT TCCGGGCCAG TCT CTGGCCCTGA TTTTCCAAGATGCTT TERM 4000 3271424 - 3271440 + F 85 -13.7 -3.08508 | opp_overlap 3271421 3271420 3271418, overlap 3271421 GCTCAATAATATTCC GGGCCAG TCT CTGGCCC TGATTTTCCAAGATG TERM 4001 3271495 - 3271509 + F 77 -7 -4.53303 | overlap 3271485 AAACTTGCGGTAGAC CGCGTC ATT GCCGCG TTTTCTGTCGCCGTC SSON_3112 3271900 - 3272403 + | IS1 ORF TERM 4002 3272993 - 3273032 + T 75 -3 -5.15969 | gap 1, overlap 3272997 GTAACTCATGTTAAG TGCCTTTGCCGGATAATAT AAA AAGTTATCCGGCAAAT-TA TTTTTTACATTAGCC TERM 4003 3272997 - 3273029 + T 100 -12.9 -4.67173 | overlap 3272993 CTCATGTTAAGTGCC TTTGCCGGATAATAT AAA AAGTTATCCGGCAAA TTATTTTTTACATTA SSON_3114 3274162 - 3273131 - | IS630 orf TERM 4004 3273177 - 3273196 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 3273189 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG SSON_3116 3275006 - 3275509 + | IS1 ORF ygjT 3276531 - 3275566 - | putative transport protein TERM 4005 3276581 - 3276556 - R 100 -13.3 -5.76633 | opp_overlap 3276555 3276553 3276556 TTACACATAAAAAAA CGGCCAACGTC GGAA GACGTCAGCCG CTGCTTTTTATGCAT TERM 4006 3276637 - 3276656 + r 83 -10.8 -3.66178 | opp_overlap 3276637 ACTTACAACAAAAAA GGAATACG TCTG CGTATTCC TTTCGGGTTGCCCGG TERM 4007 3276656 - 3276637 - R 100 -10.8 -5.56673 | opp_overlap 3276637 ACTTACAACAAAAAA GGAATACG TCTG CGTATTCC TTTCGGGTTGCCCGG ygjR 3277818 - 3276814 - | hypothetical protein TERM 4008 3277029 - 3277047 + g 70 -3.8 -4.65895 | opp_overlap 3277029 GCGGCACGAAGCACA CTTTCTGG CAT TCAGACAG TTTTTCAATCACCAG ygjQ 3278454 - 3277879 - | hypothetical protein ygjP 3279178 - 3278639 - | hypothetical protein ygjO 3279227 - 3280363 + | putative enzyme TERM 4009 3280378 - 3280409 + F 78 -12.2 -2.52795 | overlap 3280370 3280388 AGATTGGGAGTTACC TGCCGGATGCGGCG TTAA CGCCTTATCCGGCC TACGTTCAGCACGTT TERM 4010 3280611 - 3280581 - f 71 -6.8 -4.17296 | opp_overlap 3280583, overlap 3280582 3280585 CGTCACACAGATAAA TTCATCCGTTGCCA ATC TGTCAACGGATGTT ATCATATTGCCAATT TERM 4011 3280610 - 3280582 - f 73 -10.3 -3.09896 | opp_overlap 3280583, overlap 3280581 3280585 GTCACACAGATAAAT TCATCCGTTGCCA ATC TGTCAACGGATGT TATCATATTGCCAAT TERM 4012 3280583 - 3280609 + F 93 -13.8 -3.52073 | opp_overlap 3280582 3280581 3280585 TCACACAGATAAATT CATCCGTTGCCA ATC TGTCAACGGATG TTATCATATTGCCAA TERM 4013 3280607 - 3280585 - f 71 -10.6 -2.75389 | opp_overlap 3280583, overlap 3280582 3280581 ACACAGATAAATTCA TCCGTTGCCA ATC TGTCAACGGA TGTTATCATATTGCC ygjN 3280648 - 3280962 + | hypothetical protein ygjM 3280959 - 3281375 + | hypothetical protein ygjL 3283438 - 3281420 - | putative NADPH dehydrogenase TERM 4014 3283334 - 3283313 - G 70 -5.1 -4.36914 | gap 1, opp_overlap 3283325 GCGTTCGGCATAAAA CGCTGCC-AG CCG CTCGGCACCG TCCGGGTATTCCTCC ygjK 3286015 - 3283664 - | glycosyl hydrolase TERM 4015 3285424 - 3285447 + g 78 -8.2 -4.15833 | gap 1 TGCCAAAGGTGACTT TCAG-GCCATC ACG GGTGGCGCTGA TTTTGCGCTGATAGT ygjJ 3286925 - 3286032 - | hypothetical protein TERM 4016 3287218 - 3287182 - R 76 -8.3 -4.04922 | opp_overlap 3287178, overlap 3287185 ATATAAAGGCAGAAA CTATTTTCCCTC-TCCT CATCC AGGAAGAGGGAAAAT-G CCTGCTCATTTTTTA TERM 4017 3287216 - 3287185 - R 75 -11.1 -3.05274 | gap 1, opp_overlap 3287178, overlap 3287182 TAAAGGCAGAAACTA TTTTCCCTC-TCCT CATCC AGGAAGAGGGAAAA TGCCTGCTCATTTTT SSON_3127 3288088 - 3287585 - | IS1 ORF TERM 4018 3288452 - 3288464 + r 70 -4.7 -4.45664 | GATCCACGCTGCGCG CGCCG GAA CGCCG TTTTCGTTCAGTTCG SSON_3129 3289252 - 3288749 - | IS1 ORF SSON_3131 3290697 - 3289666 - | IS630 orf TERM 4019 3289712 - 3289731 + gH 74 -2.2 -5.03145 | gap 1, opp_overlap 3289724 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG yghT 3290584 - 3291258 + | hypothetical protein TERM 4020 3291300 - 3291266 - TR 100 -13.7 -4.68994 | opp_overlap 3291272 ATCACTAGTCAAAAA TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA GGAAGGTTAAATCAA TERM 4021 3291272 - 3291294 + Tr 79 -9.1 -4.08692 | opp_overlap 3291266 AGTCAAAAATGGAAA TGCCCGATC GCCAG GACCGGGCA TTTTCAGGAAGGTTA pitB 3292806 - 3291307 - | low-affinity phosphate transport TERM 4022 3293083 - 3293047 - R 100 -16.8 -3.16668 | opp_overlap 3293037 3293048, overlap 3293035 3293037 GAATATTTTGATTAA TCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGGT TGCTACAACATGTAT TERM 4023 3293048 - 3293082 + r 100 -20.3 -3.15249 | opp_overlap 3293047 3293035 3293037, overlap 3293037 AATATTTTGATTAAT CCCCGTACTGATTAT TCTTC ATAATCAGTACGGGG TTGCTACAACATGTA gsp 3294957 - 3293098 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase SSON_3134 3295114 - 3296028 + | putative glutathione S-transferase YghU TERM 4024 3296135 - 3296102 - T 73 -9.5 -3.31322 | opp_overlap 3296109 3296110 3296112, overlap 3296070 3296103 GGCAATCGTGCACAA TGCCTGATGCGACGC TGCC GCGTCTTATCAGGCC TACGAAAGCTAATCA TERM 4025 3296134 - 3296103 - T 81 -13 -2.58579 | opp_overlap 3296109 3296110 3296112, overlap 3296070 3296102 GCAATCGTGCACAAT GCCTGATGCGACGC TGCC GCGTCTTATCAGGC CTACGAAAGCTAATC hybG 3296399 - 3296151 - | hydrogenase 2 accessory protein HypG hybF 3296753 - 3296412 - | hydrogenase nickel incorporation protein HybF TERM 4026 3296655 - 3296620 - G 88 -8.4 -4.67641 | gap 2, opp_overlap 3296620 3296621, overlap 3296621 3296622 3296624 ATTTCAAAACTAAAA CGGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CCA ATTTCCAGCCACACG TERM 4027 3296654 - 3296621 - G 72 -9.7 -3.395 | gap 2, opp_overlap 3296621 3296620, overlap 3296620 3296622 3296624 TTTCAAAACTAAAAC GGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CC AATTTCCAGCCACAC TERM 4028 3296654 - 3296622 - G 76 -12.1 -2.62977 | gap 1, opp_overlap 3296621 3296620, overlap 3296621 3296620 3296624 TTCAAAACTAAAACG GACGGCGCTCTCCT CAACGC AGGAGAGCGC-GCC AATTTCCAGCCACAC TERM 4029 3296652 - 3296624 - G 71 -11.1 -2.84272 | gap 1, opp_overlap 3296621 3296620, overlap 3296621 3296622 3296620 CAAAACTAAAACGGA CGGCGCTCTCCT CAACGC AGGAGAGCGC-G CCAATTTCCAGCCAC hybE 3297234 - 3296746 - | hydrogenase 2-specific chaperone TERM 4030 3296799 - 3296776 - G 100 -13.2 -3.72695 | gap 1, opp_overlap 3296763 3296777, overlap 3296778 ACTCCTGCGACCAAA CA-GCAGGGCG CGA CGCCCTGCGTG TGGTACATCCGGATT TERM 4031 3296777 - 3296797 + g 77 -12.5 -2.80816 | opp_overlap 3296776 3296778, overlap 3296763 CTCCTGCGACCAAAC AGCAGGGCG CGA CGCCCTGCG TGTGGTACATCCGGA TERM 4032 3296796 - 3296778 - G 100 -16 -3.44848 | opp_overlap 3296777 3296763, overlap 3296776 TCCTGCGACCAAACA GCAGGGCG CGA CGCCCTGC GTGTGGTACATCCGG hybD 3297721 - 3297227 - | hydrogenase 2 maturation endopeptidase TERM 4033 3297368 - 3297383 + g 70 -4.6 -4.57569 | CGATTCCGGGATCAC GCCGAC CAGG GTCAGC TTTTTCGGAAACTCA hybC 3299424 - 3297721 - | hydrogenase 2 large subunit TERM 4034 3299270 - 3299284 + g 72 -4.9 -4.61633 | opp_overlap 3299262, overlap 3299273 3299277 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 4035 3299443 - 3299454 + r 76 -4.4 -5.07652 | overlap 3299432 3299437 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3300599 - 3299421 - | putative hydrogenase 2 b cytochrome subunit hybA 3301575 - 3300589 - | hydrogenase 2 protein HybA TERM 4036 3301232 - 3301245 + g 72 -6.7 -4.29106 | CAGTTCGGATCGACG CAGTG CATA CACTG TTTCTTAATGTACGC SSON_3142 3302696 - 3301578 - | hydrogenase 2 small subunit SSON_3143 3303172 - 3302885 - | hypothetical protein TERM 4037 3303184 - 3303212 + r 71 -7 -4.07568 | gap 1, opp_overlap 3303195, overlap 3303185 TCATCGTTCACCTCA T-TCGCTATATAT CGCC ATATATAGCGATA TTTTAGGCAAAGAAC TERM 4038 3303185 - 3303210 + r 86 -12.1 -3.63744 | opp_overlap 3303195, overlap 3303184 CATCGTTCACCTCAT TCGCTATATAT CGCC ATATATAGCGA TATTTTAGGCAAAGA yghYX 3304217 - 3303291 - | hydrolase TERM 4039 3304886 - 3304899 + G 70 -4.5 -4.45544 | CGAGTTGCTGCACGA GTGGA AAAT TCCGC TTTTAATTCATCAAC SSON_3145 3304335 - 3305375 + | aldo-keto reductase TERM 4040 3305407 - 3305387 - T 100 -15.4 -3.62775 | overlap 3305376 ATGACCTGTTAATAA CGGGCGCG CGAAC CGCGCCCG AATCAGATCAGTGAT yqhA 3305909 - 3305415 - | hypothetical protein TERM 4041 3306187 - 3306163 - g 72 -6.9 -4.27843 | overlap 3306160 3306167 CCCAAACAGAAACAA CCGACGCCAGG CAT CCAGGCGAAGG TGACACCGGTACCGG yghA 3306100 - 3306984 + | oxidoreductase TERM 4042 3307016 - 3306990 - T 100 -13.8 -5.44119 | opp_overlap 3306969 3306987 3306990 TTTAGGTTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTGTGAATTCAC TERM 4043 3306990 - 3307016 + T 87 -14.5 -2.86539 | opp_overlap 3306990, overlap 3306969 3306987 TTTAGGTTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTGTGAATTCAC TERM 4044 3307109 - 3307135 + T 72 -10.8 -2.78298 | overlap 3307108 GCAATAGATTTTGTA GGCCTGATGAGC GTA GCGCATCAGGCA ATTCTACTTTACTTC exbD 3307569 - 3307144 - | biopolymer transport protein ExbD exbB 3308310 - 3307576 - | biopolymer transport protein ExbB SSON_3150 3308458 - 3308303 - | hypothetical protein TERM 4045 3308559 - 3308549 - H 73 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG AGATGGCGGACAAAA TERM 4046 3308702 - 3308690 - g 85 -6.9 -4.74103 | overlap 3308693 TGTGGAAGCCAAAAA GCACG CGA CGCGC AATCGCGCCAATGGC metC 3308562 - 3309749 + | cystathionine beta-lyase TERM 4047 3310251 - 3310277 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT yghB 3309889 - 3310548 + | hypothetical protein TERM 4048 3310559 - 3310584 + TF 86 -11.9 -3.5486 | overlap 3310557 CCTGACGATTTTCCC CGTTCCCGG CTGCTGTA CCGGGAACG TATTTAATTCCCCTG yqhC 3311715 - 3310588 - | putative ARAC-type regulatory protein TERM 4049 3312584 - 3312569 - gH 71 -3.2 -4.8622 | CTGTGGAATGAAAAA CGCG AGACCAAG CGCG CTAAGCTGCTGCAAT yqhD 3311681 - 3312844 + | putative oxidoreductase TERM 4050 3312931 - 3312902 - fH 77 -10.7 -3.36968 | opp_overlap 3312905, overlap 3312904 3312905 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 4051 3312929 - 3312904 - fH 83 -13.3 -3.25192 | opp_overlap 3312905, overlap 3312902 3312905 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 4052 3312928 - 3312905 - fH 95 -16.8 -2.54794 | opp_overlap 3312905, overlap 3312904 3312902 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 4053 3312905 - 3312928 + FH 100 -16.8 -3.25823 | opp_overlap 3312904 3312902 3312905 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3312949 - 3313776 + | 2,5-diketo-D-gluconate reductase A yqhG 3313977 - 3314903 + | hypothetical protein yqhH 3314954 - 3315211 + | putative outer membrane lipoprotein TERM 4054 3315247 - 3315220 - T 100 -12.7 -5.73339 | opp_overlap 3315220 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC TERM 4055 3315220 - 3315247 + T 100 -14.9 -5.78622 | opp_overlap 3315220 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC ygiRQ 3317473 - 3315254 - | hypothetical protein TERM 4056 3315313 - 3315325 + g 90 -4.8 -5.44119 | TCACCGGACGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC TERM 4057 3316322 - 3316305 - G 72 -6.9 -4.25957 | overlap 3316302 ATAGAACAGAAAGAA CAGCCGC CAAA GCAGCCG CGCATAATGTTGACC TERM 4058 3316666 - 3316678 + g 70 -5.5 -4.30719 | overlap 3316667 TGGCTTCCTGCTTTT TCGGT GCC ACCGG TTTGTTATCCGCGCA TERM 4059 3317587 - 3317547 - R 86 -9.3 -4.42081 | gap 2, overlap 3317548 3317550 AAGAGAAATCGAAAA GTA-T-TCCATACTCGCCC TCCTC GGGCGAGTATGAAGATTAC GGTACCGGATTGACT TERM 4060 3317583 - 3317548 - R 71 -9.9 -3.23622 | gap 1, overlap 3317547 3317550 AGAGAAATCGAAAAG TATTCCATACTCGCCC TCCTC GGGCGAGTATG-AAGA TTACGGTACCGGATT TERM 4061 3317582 - 3317550 - R 81 -12.8 -3.16695 | overlap 3317548 3317547 AGAAATCGAAAAGTA TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG ATTACGGTACCGGAT sufI 3318996 - 3317584 - | repressor protein for FtsI plsC 3319808 - 3319071 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase parC 3322299 - 3320041 - | DNA topoisomerase IV subunit A TERM 4062 3321470 - 3321491 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACAC TERM 4063 3322428 - 3322402 - R 75 -11.5 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGACGGCGA TAAAGGCATCAATGT SSON_3162 3323327 - 3322845 - | hypothetical protein ygiW 3323772 - 3323380 - | hypothetical protein qseB 3323924 - 3324583 + | DNA-binding transcriptional regulator QseB TERM 4064 3324832 - 3324811 - g 70 -3.7 -4.72863 | CCAAATAAATTAAAA CACGGTCAT GTTG ATGACGATG CGCTGACCTTTGCCA qseC 3324580 - 3325929 + | sensor protein QseC TERM 4065 3326157 - 3326101 - g 81 -12.4 -3.18199 | gap 2, opp_overlap 3326106 3326109, overlap 3326104 CAATGGTCAACTGAA CGA-CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATGTTCG CATCGTTCGCGCCGA TERM 4066 3326153 - 3326104 - g 81 -12.9 -2.78712 | gap 1, opp_overlap 3326106 3326109, overlap 3326101 TGGTCAACTGAACGA CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATG TTCGCATCGTTCGCG TERM 4067 3326293 - 3326279 - g 77 -2.9 -5.1287 | TGGACAGTGAAAAAA TACAT TGATG ATGTA TTCACCGAAGGTCAC mdaB 3326039 - 3326620 + | modulator of drug activity B ygiN 3326651 - 3326965 + | hypothetical protein TERM 4068 3326975 - 3327003 + T 71 -7.3 -4.15396 | overlap 3326977 ATTTAATCCTGCCTT GTTTGCCCGGCCA TCC TGACCGGGCAATG TTCTTTCCTTTAAAC TERM 4069 3326977 - 3327001 + T 100 -14.3 -3.66578 | overlap 3326975 TTAATCCTGCCTTGT TTGCCCGGCCA TCC TGACCGGGCAA TGTTCTTTCCTTTAA parE 3328905 - 3327013 - | DNA topoisomerase IV subunit B TERM 4070 3328634 - 3328609 - G 78 -10.5 -3.48395 | ATTTTTGTTAGAGAA TTTACCGCCTG CATG CAGACGGCAAA GAATCAATTCAACCG yqiA 3329515 - 3328934 - | esterase YqiA icc 3330342 - 3329515 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 3330789 - 3330367 - | hypothetical protein TERM 4071 3330456 - 3330466 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA TERM 4072 3330814 - 3330866 + r 74 -6.9 -4.20712 | overlap 3330822 CTCATTTTTTAACGC TTGATGATGCAGCTGCAGCCATTGC AAA GCGATGACCGACGCTGCGTTGTCGA TTTTCCCCTCTTCTA nudF 3331419 - 3330790 - | ADP-ribose pyrophosphatase NudF tolC 3331624 - 3333105 + | outer membrane channel protein TERM 4073 3333332 - 3333343 + G 71 -2.2 -4.9218 | overlap 3333331 CACCAGTCGCTCTCG CGGT TGCC ACTG TTTTTATGCTGGCTG TERM 4074 3333597 - 3333582 - g 70 -4.6 -4.46926 | CATGGCACCAGAAAA CCAGGC GCAG GCCCAG CAATCCAGCGGGAGT TERM 4075 3333783 - 3333753 - g 88 -8.3 -4.59773 | gap 1, overlap 3333754 3333756 CGCGACGGGTAAAAA CTATGGCGCAGCCC AGCC AGGCCGCACCAT-G ACCGTACCGAAGACA TERM 4076 3333781 - 3333756 - g 74 -11.1 -3.24422 | overlap 3333753 3333754 GACGGGTAAAAACTA TGGCGCAGCCC AGCC AGGCCGCACCA TGACCGTACCGAAGA TERM 4077 3333890 - 3333872 - g 70 -5.2 -4.41348 | CTGTTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC ygiB 3333253 - 3333924 + | hypothetical protein TERM 4078 3333992 - 3334036 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 3334006, overlap 3333995 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGAC TERM 4079 3333995 - 3334033 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 3334006, overlap 3333992 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT ygiC 3333930 - 3335090 + | putative synthetase/amidase TERM 4080 3335097 - 3335124 + T 93 -12 -3.67558 | opp_overlap 3335095 3335091 3335098, overlap 3335100 ATTGAGTAATCAATG ATGCCGGATGGC ATTC GCCATCCGGTAA TTGTTAACCTATCTG TERM 4081 3335123 - 3335098 - T 82 -13.3 -2.85896 | opp_overlap 3335097 3335100, overlap 3335095 3335091 TTGAGTAATCAATGA TGCCGGATGGC ATTC GCCATCCGGTA ATTGTTAACCTATCT TERM 4082 3335100 - 3335121 + T 93 -15.9 -2.94313 | opp_overlap 3335098 3335095 3335091, overlap 3335097 GAGTAATCAATGATG CCGGATGGC ATTC GCCATCCGG TAATTGTTAACCTAT ygiD 3335943 - 3335128 - | hypothetical protein ygiE 3336059 - 3336832 + | zinc transporter ZupT TERM 4083 3336879 - 3336836 - T 72 -4.7 -4.59853 | gap 1, opp_overlap 3336847 3336876, overlap 3336839 3336841 3336842 3336844 GGAATTGGTTAAAAA CAAC-ATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCAGCTT CACGAAAGCCTTATT TERM 4084 3336875 - 3336839 - T 95 -11 -4.40963 | opp_overlap 3336847, overlap 3336836 3336841 3336842 3336844 ATTGGTTAAAAACAA CATCAGAAGTTGTCCA GCACA TGGACAACTTCTGCCA GCTTCACGAAAGCCT TERM 4085 3336873 - 3336841 - T 100 -13.6 -3.80746 | opp_overlap 3336847, overlap 3336839 3336836 3336842 3336844 TGGTTAAAAACAACA TCAGAAGTTGTCCA GCACA TGGACAACTTCTGC CAGCTTCACGAAAGC TERM 4086 3336872 - 3336842 - T 100 -17.1 -2.87725 | opp_overlap 3336847, overlap 3336841 3336839 3336836 3336844 GGTTAAAAACAACAT CAGAAGTTGTCCA GCACA TGGACAACTTCTG CCAGCTTCACGAAAG TERM 4087 3336870 - 3336844 - T 85 -13.9 -2.97636 | opp_overlap 3336847, overlap 3336842 3336841 3336839 3336836 TTAAAAACAACATCA GAAGTTGTCCA GCACA TGGACAACTTC TGCCAGCTTCACGAA TERM 4088 3336847 - 3336867 + T 73 -9.8 -3.31322 | opp_overlap 3336844 3336842 3336841 3336839 3336836 AAAACAACATCAGAA GTTGTCCA GCACA TGGACAAC TTCTGCCAGCTTCAC TERM 4089 3337286 - 3337265 - T 86 -5.1 -5.46706 | opp_overlap 3337265 AGGGCAAAATAAAAA CCGAAGCCA GCTA CAACTTCGG TTTCTTGATTAAGGC ribB 3337974 - 3337321 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4090 3337689 - 3337717 + g 90 -10.3 -4.41206 | opp_overlap 3337694 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT SSON_3179 3338288 - 3338638 + | hypothetical protein TERM 4091 3338654 - 3338692 + F 91 -11.4 -4.24397 | gap 1, opp_overlap 3338657 ACATTTGTCTTTAAT GCACTGTAAATTATGAA TTAATC TTC-TAATTTACAGTGC TTTCTATTACCTTAT ygiL 3338921 - 3339472 + | putative fimbrial protein TERM 4092 3339498 - 3339481 - T 83 -14.1 -2.70936 | opp_overlap 3339478, overlap 3339478 CGAGTAATCACATTA GGCCGGG TTCG CCCGGCC ACATCATTAACGGAT TERM 4093 3339766 - 3339755 - T 70 -2.2 -4.92757 | TTATTAATAATAAAA GGAC GCCA ATCC ATCTGGACCTGCAAT SSON_3182 3341553 - 3340648 - | insertion element IS2 transposase InsD TERM 4094 3342807 - 3342784 - H 78 -6 -4.89567 | opp_overlap 3342784 GCGTAAAAGATAAAA CCAGCCATAA AGAA TTAGGACTGG TTGCTGATGGCGGCT TERM 4095 3343162 - 3343133 - g 79 -3.7 -5.04222 | gap 1 TAATCAAAGCAAAAA TCTACCC-TATCTG GCG CAAACATGGATAGA AGATACGAAAGGCAA yqiH 3342966 - 3343724 + | hypothetical protein yqiI 3343726 - 3344790 + | hypothetical protein SSON_3185 3345841 - 3344810 - | IS630 orf TERM 4096 3344856 - 3344875 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 3344868 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG TERM 4097 3345987 - 3345962 - R 77 -11.9 -2.81584 | opp_overlap 3345967, overlap 3345967 ATCTAATACAAACAC TAAAACGGGCC ATCA GGCCCGTTATA TCAGTGCTCTAACTC TERM 4098 3345967 - 3345982 + r 86 -11.8 -3.53164 | opp_overlap 3345962 3345967 ATACAAACACTAAAA CGGGCC ATCA GGCCCG TTATATCAGTGCTCT TERM 4099 3345982 - 3345967 - R 100 -11.8 -4.5394 | opp_overlap 3345967, overlap 3345962 ATACAAACACTAAAA CGGGCC ATCA GGCCCG TTATATCAGTGCTCT glgS 3346188 - 3345988 - | glycogen synthesis protein GlgS SSON_3187 3346457 - 3347086 + | putative oxidoreductase TERM 4100 3348344 - 3348328 - g 72 -4.4 -4.59919 | gap 1, opp_overlap 3348328, overlap 3348329 AAAGCAGAAAAAGAA GCC-GCA GAGA TGCAGGC GGCGGCTATCGTTGA SSON_3188 3347113 - 3348774 + | hypothetical protein TERM 4101 3348792 - 3348814 + T 100 -8.4 -5.4251 | opp_overlap 3348791 TTTCAGCTATGAACG TCCCTGGC ACAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4102 3348993 - 3348974 - T 86 -11.4 -3.71649 | overlap 3348958 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTACAGAAGGAAAG TERM 4103 3349168 - 3349190 + T 100 -8.4 -5.4251 | opp_overlap 3349168 3349166 3349164 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4104 3349369 - 3349350 - T 86 -11.4 -3.71649 | opp_overlap 3349350 3349349, overlap 3349333 3349343 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG SSON_3189 3351001 - 3349568 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase glnE 3353889 - 3351049 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4105 3352042 - 3352017 - G 72 -11.1 -3.04144 | opp_overlap 3352009 3352003 3352034 3352039 CGGCGATGCGTAACA GCTGCGCCTGT TTGA ACTGACGCAGC GCCTCAAGCTGTTGC TERM 4106 3353064 - 3353047 - G 70 -4 -4.6951 | ACGACGGAAAACAAA CGGGCG TAGCAT CGCACG CAACTCGTTAGCATA ygiF 3355213 - 3353912 - | hypothetical protein TERM 4107 3354268 - 3354242 - G 70 -3.6 -4.65895 | opp_overlap 3354229 TTTGGCATCTAAAAA TGGCTGCCATGC TTT GCTTACCAACCA TTCGGTCAACGCCAG TERM 4108 3355887 - 3355877 - g 83 -5.4 -5.093 | GTTAAAAGAAGAAAA TCAG AAA CTGA AAAACGAGCTGATTG ygiM 3355455 - 3356075 + | putative signal transduction protein TERM 4109 3356245 - 3356272 + G 95 -11.2 -4.47397 | overlap 3356246 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTGTTTCT TERM 4110 3356246 - 3356271 + G 95 -14.7 -3.26811 | overlap 3356245 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTGTTTC TERM 4111 3356547 - 3356557 + G 78 -8.2 -4.2679 | overlap 3356546 3356547 CCGTTACGCGTACTG CGCG TGG CGCG TTTTGCTGCGCGTTA TERM 4112 3356730 - 3356751 + G 75 -5.1 -4.63218 | gap 1, overlap 3356740 TTCTTCCAGGTACTG CGCG-ATTGC GGC GCACTGCGCG TTTTATTCCCGGAAA cca 3356139 - 3357377 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4113 3357435 - 3357403 - T 70 -8.9 -3.38361 | overlap 3357399 AAACGTTAACACGAA CCATCCCCTCGCCCC TTC GGGGAGAGGGTTAGG GTGAGGGGAACAGAC bacA 3358361 - 3357540 - | undecaprenyl pyrophosphate phosphatase folB 3358823 - 3358452 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiH 3358925 - 3359542 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 4114 3360643 - 3360629 - f 72 -2.8 -5.06052 | opp_overlap 3360629 GCAAAAAATATAAAA CCAC ATTTTTA GTGG TAGTTTGTGGCGGTG ttdA 3360694 - 3361605 + | tartrate dehydratase subunit alpha TERM 4115 3362156 - 3362141 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 3361602 - 3362207 + | L(+)-tartrate dehydratase subunit beta TERM 4116 3362215 - 3362235 + F 84 -8.3 -4.57073 | opp_overlap 3362208 3362209 TCAAATAACCCTCCC GGAGAGG CTCGCCC CCTCTCC TTTTTCGCAGGCATA TERM 4117 3362421 - 3362457 + G 71 -11 -2.91912 | gap 1, overlap 3362425 CCCGTGCCGGGTGCC GTGGTGGCGATGGTGGG TATA TCCATCATCGCCAT-AC TCTCTCCCTGGCTGC TERM 4118 3362425 - 3362454 + G 90 -15.1 -2.7035 | overlap 3362421 TGCCGGGTGCCGTGG TGGCGATGGTGGG TATA TCCATCATCGCCA TACTCTCTCCCTGGC TERM 4119 3362661 - 3362651 - g 72 -5.4 -4.57073 | opp_overlap 3362658 GATTCTGGTGAAAAA GATG GGA CATC GCACGCTGTTTCTCG ygjE 3362256 - 3363719 + | hypothetical protein ygjD 3364775 - 3363762 - | O-sialoglycoprotein endopeptidase TERM 4120 3363895 - 3363920 + g 84 -3.9 -5.243 | gap 1, overlap 3363893 GTACAAAACTCCGGA CGC-GCGTAGAA CAC TTCGCCGCGGCG TTTTTTCATCATTTC TERM 4121 3364158 - 3364146 - G 72 -5.5 -4.50976 | overlap 3364153 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 4122 3364694 - 3364709 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 4123 3364979 - 3364962 - H 74 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3365012 - 3365227 + | 30S ribosomal protein S21 TERM 4124 3365271 - 3365304 + F 82 -7.6 -4.62475 | overlap 3365275 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 4125 3365275 - 3365301 + F 95 -10.9 -4.40882 | gap 1, overlap 3365271 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 4126 3365788 - 3365773 - g 70 -3.9 -4.60487 | opp_overlap 3365787, overlap 3365787 CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCTCGCT TERM 4127 3366670 - 3366637 - g 70 -5.9 -4.20696 | opp_overlap 3366637 3366648, overlap 3366629 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 3365338 - 3367083 + | DNA primase TERM 4128 3368051 - 3368031 - g 73 -9.1 -3.60948 | GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTGCCG rpoD 3367278 - 3369119 + | RNA polymerase sigma factor RpoD TERM 4129 3369193 - 3369222 + T 89 -9.3 -4.59109 | overlap 3369195 CACCTTTTCGGTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4130 3369195 - 3369220 + T 100 -16.3 -3.90762 | overlap 3369193 CCTTTTCGGTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_3205 3370550 - 3369204 - | IS4 orf TERM 4131 3370540 - 3370565 + g 73 -9.1 -3.61398 | opp_overlap 3370540 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4132 3370565 - 3370540 - G 100 -9.8 -5.61596 | opp_overlap 3370540 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC ygjF 3371143 - 3370637 - | G/U mismatch-specific DNA glycosylase TERM 4133 3371355 - 3371376 + r 100 -14.5 -5.71295 | opp_overlap 3371355 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 4134 3371376 - 3371355 - R 100 -14.5 -3.91597 | opp_overlap 3371355 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT yqjH 3372161 - 3371397 - | hypothetical protein TERM 4135 3372345 - 3372314 - H 70 -10 -3.10715 | opp_overlap 3372324 GGCATCATTACTCAA CGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACGTGTGAGATGAG TERM 4136 3373036 - 3373021 - g 100 -3.3 -5.72622 | opp_overlap 3373028 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCACGCCGCTTTT yqjI 3372449 - 3373072 + | hypothetical protein TERM 4137 3373114 - 3373145 + T 76 -11.6 -2.64099 | opp_overlap 3373123 3373125, overlap 3373113 CTACACACCCCGCAG GCCTGATAAGATGC GCCA GCATCGCATCAGGC ATTGTGCTCCAACCG TERM 4138 3373194 - 3373223 + T 82 -11.3 -3.57144 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA aer 3374699 - 3373179 - | aerotaxis sensor receptor, flavoprotein TERM 4139 3374428 - 3374445 + g 70 -4.1 -4.59773 | opp_overlap 3374422, overlap 3374413 CGCACCCAATAATGG TCGCC ATTTTTGC GGCGA TTTTTCACGATGCCG TERM 4140 3374909 - 3374890 - H 74 -5.8 -4.57073 | gap 1, overlap 3374893 TATCTTGCCCAAAAA TCA-GGCAA TTA TTGCCCTGA AAACGTGCATTTGCG ygjG 3375090 - 3376496 + | putrescine--2-oxoglutarate aminotransferase TERM 4141 3376502 - 3376534 + T 100 -12.8 -4.82901 | opp_overlap 3376504, overlap 3376504 AGAAGCGTAATATCA AATCGGATGGCGAT ACGAC GTCGCCATCCGATC TTTTTATACGACGCG TERM 4142 3376504 - 3376532 + T 100 -15.4 -4.03995 | opp_overlap 3376504, overlap 3376502 AAGCGTAATATCAAA TCGGATGGCGAT ACGAC GTCGCCATCCGA TCTTTTTATACGACG TERM 4143 3376532 - 3376504 - T 100 -14.7 -3.9344 | opp_overlap 3376504 3376502 AAGCGTAATATCAAA TCGGATGGCGA TACGACG TCGCCATCCGA TCTTTTTATACGACG ygjH 3376870 - 3376538 - | hypothetical protein TERM 4144 3376733 - 3376746 + g 71 -2.3 -5.00884 | overlap 3376718 CGGCACCAGGCTGGT CACGG TTTG CAGTG TTTTTTCCCCCACAT TERM 4145 3378016 - 3377998 - g 95 -10.2 -4.72272 | opp_overlap 3378011 CTGGTGTATGAAAAA GCCCGCGA TGG TCGCGCGC TGCCGCTGCTAGTCT ebgR 3377089 - 3378072 + | DNA-binding transcriptional repressor EbgR TERM 4146 3378126 - 3378074 - T 82 -11.5 -3.56092 | gap 1, opp_overlap 3378083 3378086 3378121 3378123, overlap 3378086 GCACGACCCGTTAAA TCCCCTTACA-CACTGTCCGGCAA TCATTT TTGCCGGACAGTGCTGTAATGCCA GTCAGTTAAGCAACT TERM 4147 3378083 - 3378116 + T 93 -15.4 -2.79183 | opp_overlap 3378074 3378086, overlap 3378086 GTTAAATCCCCTTAC ACACTGTCCGGCAA TCATTT TTGCCGGACAGTGC TGTAATGCCAGTCAG TERM 4148 3378113 - 3378086 - T 93 -15.7 -2.8806 | opp_overlap 3378083 3378086, overlap 3378074 AAATCCCCTTACACA CTGTCCGGCAA TCATTT TTGCCGGACAG TGCTGTAATGCCAGT TERM 4149 3378086 - 3378113 + T 90 -15.7 -2.66435 | opp_overlap 3378086 3378074, overlap 3378083 AAATCCCCTTACACA CTGTCCGGCAA TCATTT TTGCCGGACAG TGCTGTAATGCCAGT TERM 4150 3378121 - 3378150 + T 89 -9.3 -4.59109 | opp_overlap 3378074, overlap 3378123 CCGGACAGTGCTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4151 3378123 - 3378148 + T 100 -16.3 -3.90762 | opp_overlap 3378074, overlap 3378121 GGACAGTGCTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_3214 3379478 - 3378132 - | IS4 orf TERM 4152 3379493 - 3379468 - G 100 -9.8 -5.61596 | opp_overlap 3379468 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4153 3379468 - 3379493 + g 73 -9.1 -3.61398 | opp_overlap 3379468 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4154 3379537 - 3379559 + H 78 -5.5 -4.73614 | TGATCCTTAACTGAT CGGCATTAC GGACA GTGCTGCCG TTTATTTTCGTGATC TERM 4155 3379834 - 3379846 + G 90 -7.7 -5.00616 | GCCCTTAAGCGGTCA GTGGA ATT TCCAC TTTTTTGACCACCCG TERM 4156 3380517 - 3380504 - g 75 -4.5 -4.74103 | opp_overlap 3380504 TTGGCAATTGAAAAA CTGAC CAGC GCCAG CTTTGCTTTTACTGT TERM 4157 3381657 - 3381635 - g 72 -7.6 -3.8647 | ACGCAGCAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTGCA ebgA 3379694 - 3382519 + | evolved beta-D-galactosidase, alpha subunit; cryptic gene TERM 4158 3383201 - 3383213 + G 72 -7.7 -3.96216 | opp_overlap 3383198 3383197 3383201 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 3382783 - 3383232 + | cryptic beta-D-galactosidase subunit beta TERM 4159 3383269 - 3383233 - f 76 -8 -4.27512 | overlap 3383236 3383239 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCACCGCTA CCCTACTCATTTTCG TERM 4160 3383266 - 3383236 - f 87 -9.7 -4.24183 | overlap 3383233 3383239 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCACCG CTACCCTACTCATTT TERM 4161 3383263 - 3383239 - f 80 -12.2 -3.09866 | overlap 3383236 3383233 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCA CCGCTACCCTACTCA TERM 4162 3383541 - 3383527 - g 75 -5.6 -4.60041 | ACGCATGGGTAAAAA GTTCGC TGG GCGGAC GTTGGGCATTTATTA SSON_3217 3383295 - 3383882 + | hypothetical protein TERM 4163 3384968 - 3384949 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 3384931 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_3218 3383983 - 3385014 + | IS630 orf yghS 3385443 - 3386156 + | hypothetical protein TERM 4164 3386494 - 3386470 - g 72 -7 -4.24384 | opp_overlap 3386470 3386473, overlap 3386465 AGCATGAAAACCAAA TCTCCGGCGC TATGG GCGGCGGTGA TTATGTACTGCTTAT yghR 3386188 - 3386946 + | hypothetical protein yghQ 3386992 - 3388350 + | hypothetical protein SSON_3222 3388847 - 3388344 - | IS1 ORF TERM 4165 3389951 - 3389934 - R 100 -14.1 -3.80733 | opp_overlap 3389931 3389931 3389946, overlap 3389944 TCTACGGTAGAAGAA GGGCCGC AAAC GCGGCCC GGGCTGTTATCAGAA sigA 3393818 - 3389961 - | serine protease TERM 4166 3393146 - 3393128 - G 78 -5.3 -4.80882 | AGTCCAGATTAAAAA GACTTGC GCTTA ACAAGTC GGGATTATAGTTTTG TERM 4167 3394031 - 3394045 + r 80 -7.2 -4.57581 | overlap 3394026 3394018 TATTTTGAACTTTGC GATCAA AAT TTGATC TTTGTTGTTTCCGGT TERM 4168 3394121 - 3394101 - R 78 -11.9 -3.05463 | opp_overlap 3394101 ATCCGGGGGAGTTAA GTCTGTCGA TGT CCGACAGAC TTTTGATGATGGAAA TERM 4169 3394101 - 3394121 + r 91 -11.2 -4.30576 | opp_overlap 3394101 ATCCGGGGGAGTTAA GTCTGTCG ATGTC CGACAGAC TTTTGATGATGGAAA SSON_3224 3394940 - 3394179 - | hypothetical protein TERM 4170 3394601 - 3394626 + g 83 -6.1 -4.90906 | CATCCAGGTCCGTAC TGGCACCGATG TCGG CGTTGATGCCA TTTTTCGTGTTGTGG TERM 4171 3394636 - 3394674 + g 79 -9.7 -3.85698 | gap 1 ATGCCATTTTTCGTG TTGTGGTAGCGGTCGCCT TTGA AGGCG-CTGCTGTCATAA TTTCTGACCAGCACG SSON_3225 3399804 - 3396289 - | superfamily I DNA helicases TERM 4172 3398348 - 3398367 + g 85 -2.9 -5.34365 | gap 1, overlap 3398348 3398349 3398351 TTCCATTCCGTTTTA G-CACTCT TCAGT AGAGTGAC TTTTTGTTCTTGTCC TERM 4173 3399885 - 3399853 - R 72 -4.9 -4.68724 | opp_overlap 3399861, overlap 3399854 3399856 TTATCGAATATAAAA CCACCATATGGACAA CTA TTGTCCATATTGAAA AAGTTGGATGCAATG TERM 4174 3399882 - 3399856 - R 77 -11 -3.26141 | opp_overlap 3399861, overlap 3399854 3399853 TCGAATATAAAACCA CCATATGGACAA CTA TTGTCCATATTG AAAAAGTTGGATGCA TERM 4175 3399861 - 3399877 + r 70 -9.5 -3.03159 | opp_overlap 3399856 3399854 3399853 TATAAAACCACCATA TGGACAA CTA TTGTCCA TATTGAAAAAGTTGG TERM 4176 3400262 - 3400214 - R 90 -6.9 -5.38958 | gap 2, opp_overlap 3400222 3400222 3400226, overlap 3400217 3400226 ATTTACAAAGAAAAA TAATCAGTTAAAGCAGTCCGGGC AATCA GCCCGGACTGCTT-A-CTATTTT AATGGATTGTTAATC TERM 4177 3400259 - 3400217 - R 88 -8.6 -4.76311 | gap 2, opp_overlap 3400222 3400222 3400226, overlap 3400214 3400226 TACAAAGAAAAATAA TCAGTTAAAGCAGTCCGGGC AATCA GCCCGGACTGCTT-A-CTAT TTTAATGGATTGTTA TERM 4178 3400222 - 3400256 + r 100 -14.3 -3.75571 | opp_overlap 3400217 3400214 3400226, overlap 3400222 3400226 AGAAAAATAATCAGT TAAAGCAGTCCGGGC AATCA GCCCGGACTGCTTAC TATTTTAATGGATTG TERM 4179 3400222 - 3400258 + r 91 -11.1 -4.32651 | gap 2, opp_overlap 3400217 3400214 3400226, overlap 3400222 3400226 AGAAAAATAATCAGT TA--AAGCAGTCCGGGC AATCA GCCCGGACTGCTTACTA TTTTAATGGATTGTT TERM 4180 3400252 - 3400226 - R 100 -19.5 -3.74658 | opp_overlap 3400222 3400222 3400226, overlap 3400217 3400214 AAATAATCAGTTAAA GCAGTCCGGGC AATCA GCCCGGACTGC TTACTATTTTAATGG TERM 4181 3400226 - 3400252 + r 100 -19.5 -3.55966 | opp_overlap 3400226 3400217 3400214, overlap 3400222 3400222 AAATAATCAGTTAAA GCAGTCCGGGC AATCA GCCCGGACTGC TTACTATTTTAATGG SSON_3226 3401851 - 3400832 - | putative transposase TERM 4182 3402746 - 3402759 + r 70 -5.2 -4.386 | TCCGAAATCAGTTTT CGGG CCTCAT CCCG TTTTGTACGAGCTTC TERM 4183 3403145 - 3403126 - R 100 -13.6 -4.98531 | opp_overlap 3403126 TTCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG TERM 4184 3403126 - 3403145 + r 90 -13.6 -3.31196 | opp_overlap 3403126 TTCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG TERM 4185 3403191 - 3403207 + r 73 -10.9 -2.62616 | opp_overlap 3403190 3403188 3403185 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yqgA 3404046 - 3403339 - | putative transport protein TERM 4186 3404235 - 3404250 + H 71 -7.6 -3.92005 | TCTCTCGCTTATCGC CGTTTC GCGC GAAACG TTTCCCTTTCTATGT TERM 4187 3404340 - 3404310 - H 73 -9.9 -3.41602 | opp_overlap 3404309 3404312 3404319 TTCACTGCAGGACAA CAGTAAAATCAGA GCGTT TCTGCTTTTACTG ATGTCTGGCGGTCGT TERM 4188 3404427 - 3404437 + G 78 -8.2 -4.21936 | CGGTATTCTTACTTC CCCG AAA CGGG TTTTGCGCTTATGAA TERM 4189 3404606 - 3404627 + G 90 -7.3 -5.0916 | overlap 3404593 TGCGTTGCTTAAGCG CACCGGT TTTCATCT ACCGGTG TTTTTGTATTCCGAA TERM 4190 3404855 - 3404840 - g 77 -6.8 -4.56597 | opp_overlap 3404840 TGCGTTTTTTAAAAA GCATCC TGCC GGACGC CATTTTTACGATTTC TERM 4191 3405542 - 3405531 - g 82 -3 -5.29782 | CAGATCCATAAAAAA GATA ACCA TATC CGCGGACAGGCGCGT TERM 4192 3405543 - 3405556 + G 72 -5.2 -4.57569 | overlap 3405553 AAAGATAACCATATC CGCG GACAGG CGCG TTTTTGCCCGCATAA TERM 4193 3406274 - 3406263 - g 76 -3.6 -4.92363 | AAAGACCTACAAAAA GCGA TGTT CCGC CAGCAGAGTTTCCCG speC 3404364 - 3406394 + | ornithine decarboxylase SSON_3231 3407718 - 3406591 - | putative transposase TERM 4194 3406773 - 3406793 + g 100 -5.3 -5.47159 | overlap 3406753 3406750 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG TERM 4195 3408147 - 3408104 - R 90 -14 -3.34013 | opp_overlap 3408115, overlap 3408115 TATGTGTTGAAGTAA GAATAAAAAAACGGGTCACC TTCT GGCGACCCGTTTTTCTTTGC GTAATTAGTGGCTAA TERM 4196 3408136 - 3408115 - R 100 -13.7 -5.95946 | opp_overlap 3408115, overlap 3408104 GTAAGAATAAAAAAA CGGGTCACC TTCT GGCGACCCG TTTTTCTTTGCGTAA TERM 4197 3408115 - 3408136 + r 100 -11.5 -5.30616 | opp_overlap 3408104 3408115 GTAAGAATAAAAAAA CGGGTCACC TTCT GGCGACCCG TTTTTCTTTGCGTAA nupG 3409456 - 3408152 - | transport of nucleosides, permease protein TERM 4198 3409576 - 3409599 + r 70 -10.3 -2.51471 | overlap 3409575 TGTGGATAACATTTT TGCCCCTGA GCATCG TCAGGGGCG GTTAATGGAATTATC mltC 3410692 - 3409610 - | murein transglycosylase C TERM 4199 3410723 - 3410750 + r 93 -6.3 -5.8096 | gap 1, opp_overlap 3410725, overlap 3410726 3410727 TGTTTGTTTTTATGC AAGTTGCCGGAG GCGTG CTCCGGC-ACTG TTTTTATTTTTTATC TERM 4200 3410726 - 3410748 + r 86 -9.1 -4.48934 | opp_overlap 3410725, overlap 3410723 3410727 TTGTTTTTATGCAAG TTGCCGGAG GCGTG CTCCGGCAC TGTTTTTATTTTTTA TERM 4201 3410727 - 3410747 + r 81 -12.6 -3.257 | opp_overlap 3410725, overlap 3410726 3410723 TGTTTTTATGCAAGT TGCCGGAG GCGTG CTCCGGCA CTGTTTTTATTTTTT yggX 3411029 - 3410754 - | hypothetical protein TERM 4202 3410847 - 3410867 + g 73 -4 -4.78981 | overlap 3410840 AAGCAGCTTGCGGTG CTCGGCAT TCATC ATGTTGAG TTTCTTTTCATTAAT mutY 3412109 - 3411057 - | adenine DNA glycosylase TERM 4203 3411281 - 3411304 + g 70 -6 -4.24342 | gap 1, opp_overlap 3411275, overlap 3411281 CGGCAGCAATCTGCC GT-TGCGCCAG CCA CTGCCGCAAAC TTTCTTCGTCGGCAA TERM 4204 3411429 - 3411408 - G 71 -2.8 -4.87626 | opp_overlap 3411408 3411418, overlap 3411411 CTGTAACAGCAAAAA GTAGCCGG TGCGCT CCGGCAGC GTCTGTTTCGTTTTT trmB 3412270 - 3412989 + | tRNA (guanine-N(7))-methyltransferase yggL 3412989 - 3413315 + | hypothetical protein TERM 4205 3413455 - 3413478 + F 100 -8.8 -5.4505 | overlap 3413458 ACTTTGTTATCAATC TGGGGCCAGC AAAT GCTGGCCTGA TTTTTTCTTGAGGGA TERM 4206 3413458 - 3413475 + F 88 -12.7 -3.5087 | overlap 3413455 TTGTTATCAATCTGG GGCCAGC AAAT GCTGGCC TGATTTTTTCTTGAG TERM 4207 3413528 - 3413512 - g 74 -8 -4.12188 | opp_overlap 3413512 3413511 CTATGATGCGCAAAA TGCTGC TGGCG GCAGCA CTTTCAGTGACGGCA TERM 4208 3413570 - 3413592 + G 73 -12 -2.82623 | overlap 3413567 3413572 CGCCGACTACCAGTG CAGCGTCACG CCG CGTGACGATG TGATTGTCAGCCCGC TERM 4209 3414141 - 3414122 - g 77 -6.4 -4.6644 | opp_overlap 3414121 AACAGAGTGGAAAAA GCAGGAAA AAGA TTTCCAGC AGTTTGGCAAAGATG yggN 3413499 - 3414218 + | hypothetical protein TERM 4210 3414234 - 3414256 + F 79 -9.2 -4.12315 | opp_overlap 3414234 TCCTCTATTTTAAGA CGGCATAATA CTT TTTTATGCCG TTTAATTCTTCGTTT ansB 3414394 - 3415440 + | L-asparaginase II TERM 4211 3415448 - 3415468 + F 100 -14.7 -4.74103 | opp_overlap 3415444 AGTACTAATCACCTC GCCCCGGTA TCG TGCCGGGGC TTTTTCACTTCAGAC TERM 4212 3415546 - 3415521 - f 75 -9.9 -3.51825 | gap 1, opp_overlap 3415521 3415520 3415519 TTACCCTAATGATAA TCAC-CGGAATA AAT TATTCCGCGTGA GGTTTTTCGGGTGAA TERM 4213 3415679 - 3415667 - f 71 -3.3 -4.76892 | opp_overlap 3415667 AGATCAATTCAAAAA GCAGT ATC ACGGC ATTCTCAAGCTTGAT SSON_3241 3416259 - 3416762 + | IS1 ORF ygjU 3417361 - 3418605 + | serine/threonine transporter SstT TERM 4214 3418614 - 3418638 + T 100 -12.1 -4.6468 | TAATTAATTGTTTAA CCCCTTTCGTC TAC GGCGGGAGGGG TTTTCTCTACTTTAA ygjV 3419161 - 3418610 - | hypothetical protein TERM 4215 3419217 - 3419193 - R 95 -12.9 -4.21922 | opp_overlap 3419193 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC TERM 4216 3419193 - 3419217 + r 100 -10 -5.4505 | opp_overlap 3419193 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC uxaA 3420731 - 3419244 - | altronate hydrolase TERM 4217 3419420 - 3419446 + g 77 -8.7 -4.11216 | TCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA uxaC 3422158 - 3420746 - | glucuronate isomerase TERM 4218 3420965 - 3420944 - G 72 -7.9 -3.95787 | opp_overlap 3420945 3420957, overlap 3420957 CAGCATACCGACAAA GCGGCTCAG CAGA CCGAGCTGC GCCAGTTGGGTCATC TERM 4219 3423498 - 3423518 + r 76 -8.9 -3.83502 | overlap 3423484 3423502 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTGAACCTG TERM 4220 3423502 - 3423514 + r 72 -9.1 -3.59402 | overlap 3423484 3423498 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTGAA TERM 4221 3423959 - 3424001 + r 100 -11.5 -5.34555 | gap 1, opp_overlap 3423968 3423972, overlap 3423965 3423968 AACGTTTAACGTAAG TTGTAATGACGAAGCCGCCT TATC AGGCGGCTTCGTTGTT-TAG TTTTTTCTGGTCTGC TERM 4222 3423965 - 3423996 + r 100 -17.4 -4.47686 | opp_overlap 3423968 3423972, overlap 3423959 3423968 TAACGTAAGTTGTAA TGACGAAGCCGCCT TATC AGGCGGCTTCGTTG TTTAGTTTTTTCTGG TERM 4223 3423968 - 3423993 + r 100 -19.1 -4.30001 | opp_overlap 3423968 3423972, overlap 3423965 3423959 CGTAAGTTGTAATGA CGAAGCCGCCT TATC AGGCGGCTTCG TTGTTTAGTTTTTTC TERM 4224 3423993 - 3423968 - R 100 -19.1 -2.73542 | opp_overlap 3423968 3423965 3423959, overlap 3423972 CGTAAGTTGTAATGA CGAAGCCGCCT TATC AGGCGGCTTCG TTGTTTAGTTTTTTC TERM 4225 3423989 - 3423972 - R 81 -12.7 -3.27476 | opp_overlap 3423968 3423965 3423959, overlap 3423968 AGTTGTAATGACGAA GCCGCCT TATC AGGCGGC TTCGTTGTTTAGTTT SSON_3247 3425109 - 3424021 - | putative minor pilin and initiator tsaC 3427808 - 3425106 - | outer membrane fimbrial user protein TERM 4226 3426205 - 3426193 - G 74 -6.2 -4.4767 | opp_overlap 3426193 TCACGCATCACAAAA GCGC GGGAA GCGC TAAGTTGTACAGTTT TERM 4227 3427863 - 3427823 - R 72 -4.8 -4.55446 | gap 1, opp_overlap 3427835, overlap 3427832 3427835 TAACAAATACTAAAA CAGTTAAAATAAGGGAGGG CTAC CCCTCCCTT-TGTTACGTG TTAATTCTGTTATCT TERM 4228 3427855 - 3427832 - R 91 -11 -4.35581 | opp_overlap 3427835, overlap 3427823 3427835 CTAAAACAGTTAAAA TAAGGGAGGG CTAC CCCTCCCTTT GTTACGTGTTAATTC TERM 4229 3427835 - 3427852 + r 95 -12.7 -4.254 | opp_overlap 3427832 3427823 3427835 AAACAGTTAAAATAA GGGAGGG CTAC CCCTCCC TTTGTTACGTGTTAA TERM 4230 3427852 - 3427835 - R 95 -12.7 -4.2651 | opp_overlap 3427835, overlap 3427832 3427823 AAACAGTTAAAATAA GGGAGGG CTAC CCCTCCC TTTGTTACGTGTTAA SSON_3249 3429147 - 3428116 - | IS630 orf TERM 4231 3428162 - 3428181 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 3428174 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG SSON_3250 3429537 - 3429244 - | putative adhesin major subunit pilin SSON_3252 3431063 - 3430455 - | putative fimbrial protein SSON_3251 3430014 - 3430520 + | IS1 ORF TERM 4232 3430994 - 3430979 - Gf 74 -7.6 -4.02334 | CAGCCATAGGATAAA CAGTCA TATT TGACTG TGCCAAAAAAGGAGC TERM 4233 3431037 - 3431024 - Gf 73 -3.7 -4.78753 | overlap 3431025 CGAACACGAATAAAA GCGGC GTAA GCCGT GATAAGAGATTAATT exuR 3431359 - 3432135 + | DNA-binding transcriptional repressor ExuR TERM 4234 3432149 - 3432168 + F 74 -10.7 -3.21199 | opp_overlap 3432138 GAAACTCCTGTCCGA CAGGCGC TGCGAC GCGCCTG TTCGCTTCGTCGGTA TERM 4235 3432426 - 3432410 - f 70 -5.1 -4.44819 | opp_overlap 3432422, overlap 3432412 CAGAACATACCAAAA CAGCAAT AAC ATTGCGG TAGTGCATCTTTTAA yqjA 3432480 - 3433142 + | hypothetical protein yqjB 3433146 - 3433529 + | hypothetical protein TERM 4236 3433592 - 3433619 + F 79 -10.6 -3.48924 | opp_overlap 3433592 3433593 3433595, overlap 3433593 3433596 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG TERM 4237 3433593 - 3433618 + F 76 -11.9 -2.6914 | opp_overlap 3433592 3433593 3433595, overlap 3433592 3433596 CTGTCTATGATTAAT GAGGCGGTGGT TAAC ACTACCGCTTC GTTGTCTGGACAATC TERM 4238 3433596 - 3433615 + F 75 -10 -3.49618 | opp_overlap 3433595 3433593 3433592, overlap 3433593 3433592 TCTATGATTAATGAG GCGGTGGT TAAC ACTACCGC TTCGTTGTCTGGACA yqjC 3433661 - 3434044 + | hypothetical protein yqjD 3434082 - 3434387 + | hypothetical protein yqjE 3434390 - 3434794 + | hypothetical protein TERM 4239 3434834 - 3434856 + G 71 -9.2 -3.54741 | opp_overlap 3434844 3434847 3434848 GCAACTGCTTAGCCA GATCCAGC AACAACG GCTGGATC TTTCCGCCAGTCGTC SSON_3259 3434784 - 3435083 + | hypothetical protein TERM 4240 3435093 - 3435111 + F 85 -12.4 -3.37071 | GGTTAACTTCCCTCT GGCCGGAG CAA TTCCGGCC TTATCCCTCAAATTT TERM 4241 3435251 - 3435234 - g 100 -4.1 -5.60993 | overlap 3435237 3435240 CCTTGCACAAAAAAA CAATCAG CAGC CTGAGTG GCGCAGTGGAGAGTA TERM 4242 3435248 - 3435237 - g 79 -4.4 -4.89054 | overlap 3435234 3435240 TGCACAAAAAAACAA TCAG CAGC CTGA GTGGCGCAGTGGAGA TERM 4243 3435507 - 3435517 + G 82 -3.2 -5.27335 | overlap 3435505 CTGCGGGCTTTACGC TGCT GAC GGCA TTTTTATTTCACAGC yqjF 3435179 - 3435661 + | hypothetical protein TERM 4244 3435689 - 3435706 + F 100 -11.3 -4.87626 | opp_overlap 3435689 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG TERM 4245 3435706 - 3435689 - f 100 -11.3 -5.37345 | opp_overlap 3435689 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG yqjG 3435731 - 3436744 + | putative transferase TERM 4246 3436739 - 3436722 - f 95 -7.7 -5.40072 | opp_overlap 3436722 CTTCGGTTAAAAAAA GGCACCT TACG AAGTGCC TCTGATAATTAGCTA yhaH 3437009 - 3437374 + | putative cytochrome TERM 4247 3437388 - 3437410 + F 93 -10.6 -4.50583 | AAAACAAATCTGCTC GCCGGATG TCTGACT CATCCGGC TTTTATCATCATGTT TERM 4248 3437854 - 3437864 + G 100 -4.6 -5.52096 | overlap 3437842 ACCGTTCAGGTGCCT GGGC CTT GCTC TTTTTTGTTCCGTTT yhaI 3437616 - 3437972 + | putative cytochrome TERM 4249 3437983 - 3438000 + F 100 -12.7 -5.07486 | opp_overlap 3437982 3437981 ATTAATCTTAGAATT GGGGCGA TATT TCGCCCC TTTTTATTAACAATA yhaK 3439024 - 3439725 + | hypothetical protein yhaL 3439742 - 3439912 + | hypothetical protein yhaNM 3441356 - 3440046 - | hypothetical protein TERM 4250 3440762 - 3440751 - G 75 -7.2 -4.35604 | opp_overlap 3440756 GGAATCGAGAATAAA GCGG ATCG CCGC AAACGGGACTTCATT TERM 4251 3440907 - 3440876 - G 75 -11.7 -2.84325 | opp_overlap 3440879, overlap 3440871 3440878 GCTGGGTAAACACCA CACCATTGTGCGT CTCAAT ACGCACAATGTTG GTATGCCCGCCGACG TERM 4252 3440879 - 3440904 + g 77 -12 -3.25823 | opp_overlap 3440878 3440876 3440871 GGGTAAACACCACAC CATTGTGCGT CTCAAT ACGCACAATG TTGGTATGCCCGCCG yhaO 3442715 - 3441384 - | putative transport system permease protein TERM 4253 3442965 - 3442948 - R 100 -11.3 -6.00086 | AGATCACAAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG TERM 4254 3442994 - 3442977 - R 80 -9.9 -3.84961 | overlap 3442989 CACCCAAGGATGAAA GCTGACA GCAA TGTCAGC CGCAGACCACTTTAA yhaP 3443817 - 3442990 - | putative L-serine dehydratase TERM 4255 3444419 - 3444385 - R 75 -11.5 -3.05384 | gap 1, opp_overlap 3444398 3444399, overlap 3444399 TTGCCGTTCAGTGAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCTTTACGCACT yhaR 3444878 - 3444426 - | hypothetical protein tdcE 3447123 - 3444829 - | formate acetyltransferase 3 TERM 4256 3445319 - 3445341 + gr 70 -5.5 -4.33854 | GACTGGGTAGGGACG GCGTTGCGA TAGGT TGGCAGCGC TTTAATTTTCTTCAT TERM 4257 3445714 - 3445724 + gr 71 -6.8 -4.07687 | overlap 3445711 CAGCACGTCGTCCAT CAGC GGT GCTG TTTTCGGCCCGACCT TERM 4258 3446719 - 3446750 + gr 83 -8.8 -4.35461 | gap 1 ATATTCAAATTCACT GTCCATTTCACGGCC ATA GGC-GTGGAATGAAC TTTTAATCATATTAA TERM 4259 3446977 - 3446997 + gr 71 -9.7 -3.18239 | GGCAGGCGTCGCTTC GGCGAGGAA AGA TTCATCGCC TTCATACGGTGTATA tdcD 3448377 - 3447157 - | propionate/acetate kinase TERM 4260 3448191 - 3448222 + g 73 -9.4 -3.57263 | gap 1, overlap 3448191 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT TERM 4261 3448191 - 3448221 + g 70 -11 -2.74144 | overlap 3448191 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA tdcC 3449722 - 3448391 - | threonine/serine transporter TdcC tdcB 3450733 - 3449744 - | threonine dehydratase TERM 4262 3449796 - 3449817 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA tdcA 3451770 - 3450832 - | DNA-binding transcriptional activator TdcA tdcR 3451959 - 3452303 + | DNA-binding transcriptional activator TdcR SSON_3277 3452929 - 3453432 + | IS1 ORF TERM 4263 3454211 - 3454185 - g 72 -5 -4.66833 | overlap 3454186 TGGCAACCGCAAAAA TGCCTGATGCGC TAC GCTTATCAGGCC TACGCCATCTCTACA SSON_3278 3454127 - 3454291 + | hypothetical protein TERM 4264 3454446 - 3454419 - T 100 -15 -4.07568 | opp_overlap 3454426, overlap 3454426 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAATCAGGTGAAA TERM 4265 3454439 - 3454426 - T 100 -9.5 -5.0925 | opp_overlap 3454426, overlap 3454419 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA TERM 4266 3454426 - 3454439 + T 93 -9.5 -4.67353 | opp_overlap 3454426 3454419 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA TERM 4267 3454559 - 3454532 - T 79 -9.2 -4.07568 | opp_overlap 3454540, overlap 3454539 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGTTTTTTAC GTAAACCAGGTGAAA TERM 4268 3454552 - 3454539 - T 74 -3.7 -5.0925 | opp_overlap 3454540, overlap 3454532 CTCCAAAAGCAAAAA CCCGC CGAA GCGGT TTTTTACGTAAACCA TERM 4269 3454540 - 3454551 + T 85 -7.2 -5.08824 | opp_overlap 3454539 3454532 TCCAAAAGCAAAAAC CCGC CGAA GCGG TTTTTTACGTAAACC TERM 4270 3454672 - 3454645 - T 100 -15 -4.07568 | opp_overlap 3454652, overlap 3454652 TCCGCTCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAATCAGGTGAAA TERM 4271 3454652 - 3454665 + T 93 -9.5 -4.67353 | opp_overlap 3454652 3454645 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA TERM 4272 3454665 - 3454652 - T 100 -9.5 -5.0925 | opp_overlap 3454652, overlap 3454645 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA yhaD 3456234 - 3455089 - | glycerate kinase I TERM 4273 3456257 - 3456268 + r 74 -7.2 -4.34263 | opp_overlap 3456257 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 3457221 - 3456331 - | tartronate semialdehyde reductase TERM 4274 3456891 - 3456905 + g 77 -10 -3.57561 | overlap 3456885 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA TERM 4275 3457148 - 3457162 + g 73 -4.2 -4.81685 | opp_overlap 3457148 ACCACCAGCGAGTAA CCTGCT TTC AGAAGG TTTTTACTCATTGGT yhaF 3458021 - 3457251 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase yhaU 3459371 - 3458037 - | putative transport protein TERM 4276 3458671 - 3458685 + g 86 -7 -4.9218 | TTGGGACCGCTTGCT GCCGCG CTG CCCGGC TTTTTGTGGTCCATA yhaG 3459746 - 3461317 + | putative hydrolase TERM 4277 3461361 - 3461344 - f 71 -7 -4.07687 | opp_overlap 3461344 ACGTCCCTCGCAAAA CATGGC CTTAGT GCCATG TTTTTATTGTTTAAA TERM 4278 3461344 - 3461361 + F 90 -7 -5.38549 | opp_overlap 3461344 ACGTCCCTCGCAAAA CATGGC CTTAGT GCCATG TTTTTATTGTTTAAA SSON_3284 3461635 - 3461937 + | IS600 ORF1 SSON_3285 3462078 - 3462791 + | IS600 ORF2 yhaV 3463152 - 3463493 + | hypothetical protein SSON_3288 3464007 - 3463504 - | IS1 ORF TERM 4279 3465421 - 3465397 - g 71 -9.2 -3.42605 | overlap 3465395 3465393 GGCATCTAAAATATA GCGCGACCGC TGGAC GCTATCGCGC TGATGCAAACAGTGA yraJ 3464292 - 3466808 + | putative outer membrane protein SSON_3290 3467403 - 3468308 + | insertion element IS2 transposase InsD TERM 4280 3468579 - 3468558 - g 77 -3 -5.07275 | TCACACAGATAAAAA GCAGCA CCGTATATTC TGCTGC AACCCAAACGGGTGT TERM 4281 3469030 - 3469018 - g 71 -9.1 -3.46117 | overlap 3469009 AGTAGACCAGTACAA CCTGG TCG CCAGG CGAAGAAGTTCAGAC yraK 3468293 - 3469246 + | putative fimbrial protein TERM 4282 3469281 - 3469249 - T 89 -11.5 -4.07885 | gap 1, overlap 3469252 CATGGTGCGGTAAAA GAAGACGTTGCGTT TTGATT AACGCAACG-CTTC GGCACTGTTACCCCT TERM 4283 3469278 - 3469252 - T 73 -7.4 -4.17048 | gap 1, overlap 3469249 GGTGCGGTAAAAGAA GACGTTGCGTT TTGATT AACGCAACG-C TTCGGCACTGTTACC yraL 3470149 - 3469289 - | hypothetical protein TERM 4284 3469350 - 3469366 + g 83 -6.5 -5.00616 | overlap 3469348 3469360 ACGCCATGAATTTCT GCGGC CAGCGCC GCCGC TTTTTTCAGCGGCAG TERM 4285 3470208 - 3470197 - H 79 -3 -5.41143 | CATTGCGTAAAAAAA TATC ACTG GATA CATTATGGTACCCTC TERM 4286 3470344 - 3470356 + GH 72 -4.7 -4.66537 | overlap 3470337 3470341 GCAGGGCACGGCGCA GGCTG ATT CTGCC TTTTATCTTCAGCAG TERM 4287 3470629 - 3470611 - gH 78 -5.3 -4.79352 | opp_overlap 3470618 3470621, overlap 3470591 3470589 3470587 3470586 CGATTTAGAACAAAA CCAGCAA GCGCG TTACTGG CAGGCAAAAATCGAT TERM 4288 3471167 - 3471144 - gH 72 -8.8 -3.5764 | gap 1, opp_overlap 3471152 AACCTCAGCCGCAAA CCGTGGATGGC GTT GCCAGCC-CGG CACAAGCCTCGGTTA yraM 3470213 - 3472249 + | putative glycosylase yraN 3472207 - 3472602 + | hypothetical protein yraO 3472622 - 3473212 + | DnaA initiator-associating protein DiaA yraP 3473222 - 3473797 + | hypothetical protein TERM 4289 3473863 - 3473898 + T 76 -8.2 -4.1899 | opp_overlap 3473875, overlap 3473832 3473865 3473866 CAACGATGCAAACCG TAGGTCGGATAAGGCG TTTA CGCCGCATCCGACATG TTTTCCCTCAAATCA TERM 4290 3473865 - 3473896 + T 72 -8.6 -3.69483 | opp_overlap 3473875, overlap 3473832 3473863 3473866 ACGATGCAAACCGTA GGTCGGATAAGGCG TTTA CGCCGCATCCGACA TGTTTTCCCTCAAAT TERM 4291 3473866 - 3473895 + T 77 -12.1 -2.81208 | opp_overlap 3473875, overlap 3473832 3473865 3473863 CGATGCAAACCGTAG GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATGTTTTCCCTCAAA yraQ 3474951 - 3473911 - | hypothetical protein yraR 3475704 - 3475024 - | hypothetical protein yhbO 3475787 - 3476305 + | hypothetical protein yhbP 3476728 - 3476285 - | hypothetical protein TERM 4292 3476566 - 3476576 + g 74 -8.2 -3.87914 | overlap 3476567 GCGGCCCACTCATCT GCGC GTG GCGC GTTTTTTCTTCCGTC TERM 4293 3476567 - 3476577 + g 100 -8.2 -5.4833 | overlap 3476566 CGGCCCACTCATCTG CGCG TGG CGCG TTTTTTCTTCCGTCA yhbQ 3476779 - 3477081 + | GIY-YIG nuclease superfamily protein yhbS 3477571 - 3477068 - | hypothetical protein yhbT 3478089 - 3477565 - | hypothetical protein TERM 4294 3478704 - 3478726 + G 71 -9 -3.43676 | overlap 3478706 GCCATTTTGATGTTG CCCGCGTGGT GCT GCCGCGCGTG TTGTCGATTCATCAG TERM 4295 3478706 - 3478724 + G 72 -10.2 -3.28814 | overlap 3478704 CATTTTGATGTTGCC CGCGTGGT GCT GCCGCGCG TGTTGTCGATTCATC yhbU 3478298 - 3479293 + | putative collagenase TERM 4296 3480108 - 3480096 - g 86 -9.1 -4.4078 | CCGCGCTAATGAAAA TGGCG CTG CGCCA CTGCCGTTGACGGCA yhbV 3479284 - 3480180 + | hypothetical protein yhbW 3480386 - 3481393 + | hypothetical protein mtr 3482755 - 3481511 - | tryptophan permease TERM 4297 3481861 - 3481845 - G 70 -4.3 -4.48902 | AGATAGTCAAACAAA CCCAGCG TTA CGCCAAG GAACGAACTCGCTAC TERM 4298 3482381 - 3482364 - G 70 -4 -4.67641 | opp_overlap 3482369 AGTGCAAAACCAAAA CCCGCC GCCCGT GCCGGG ACGTTTAGCGACATC TERM 4299 3482652 - 3482636 - G 74 -2.9 -4.9218 | overlap 3482637 CATTGACCAGAAAAA CCACGCC CCG GACATGA CCACTGGCAGAGAAA TERM 4300 3482728 - 3482701 - G 76 -10.6 -3.28712 | gap 1, opp_overlap 3482700 3482720 TGGTGCCGCCGATAA TCACCA-CGCCGC CAA GCAGCGACGGTGA CGTTTGGGTGGTGGT TERM 4301 3482865 - 3482843 - R 100 -10.6 -5.82281 | opp_overlap 3482841 3482839 3482837 3482843 AAAGACAGAAAAAAA GCCCCGAT GGTAAAA ATCGGGGC TGTATATATTATTTT TERM 4302 3482843 - 3482865 + r 74 -10.6 -3.17888 | opp_overlap 3482843, overlap 3482841 3482839 3482837 AAAGACAGAAAAAAA GCCCCGAT GGTAAAA ATCGGGGC TGTATATATTATTTT deaD 3484798 - 3482909 - | ATP-dependent RNA helicase DeaD TERM 4303 3484943 - 3484918 - R 73 -7.5 -4.04023 | overlap 3484919 ATTAACGAACAACAA CGCCCTCACCC GTTA AGGTGATGGCA ATCAAAAAAGATTAC yhbM 3485862 - 3484978 - | lipoprotein NlpI TERM 4304 3485959 - 3485938 - R 100 -15.1 -4.07568 | CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC pnp 3488175 - 3485971 - | polynucleotide phosphorylase/polyadenylase TERM 4305 3488314 - 3488332 + r 77 -7.3 -4.38712 | opp_overlap 3488315, overlap 3488315 CGTCAGCTTGAAAAA AGGGGCC ACTCA GGCCCCC TTTTCTGAAACTCGC TERM 4306 3488315 - 3488331 + r 74 -10.8 -3.22906 | opp_overlap 3488315, overlap 3488314 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG TERM 4307 3488331 - 3488315 - R 100 -10.8 -5.03314 | opp_overlap 3488315 3488314 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG rpsO 3488622 - 3488353 - | 30S ribosomal protein S15 TERM 4308 3488457 - 3488478 + g 85 -2.9 -5.34555 | opp_overlap 3488459, overlap 3488459 3488460 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC truB 3489715 - 3488771 - | tRNA pseudouridine synthase B TERM 4309 3489567 - 3489548 - G 70 -10.8 -2.78679 | opp_overlap 3489549, overlap 3489547 TTCCCCGAGGCAAAT TGGCAACA TGCC TGTTGCCA GCGGGTCCAGCGCAC rbfA 3490116 - 3489715 - | ribosome-binding factor A TERM 4310 3490054 - 3490065 + g 75 -4.4 -4.82855 | overlap 3490046 TTCACGCTGCAGGAT GAGA GCGA TCTC TTTTTGCATTTCCTG TERM 4311 3490139 - 3490153 + r 95 -11.4 -4.68506 | opp_overlap 3490139 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4312 3490153 - 3490139 - R 100 -11.4 -5.24129 | opp_overlap 3490139 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4313 3490267 - 3490228 - R 93 -15 -3.11634 | opp_overlap 3490206 3490242, overlap 3490206 3490205 CGTCACATCAGGCAA TCCATGCCGGATGCGGCG TAAA CGCCTTATCCCGCATGGA ACCCTAAAAACCTTA infB 3492952 - 3490280 - | translation initiation factor IF-2 nusA 3494464 - 3492977 - | transcription elongation factor NusA TERM 4314 3493118 - 3493108 - G 74 -8.2 -3.89346 | opp_overlap 3493113, overlap 3493109 CTTCCAGCGTACAAA CGCC ACG GGCG GCCAGTTTGAATGCC TERM 4315 3493211 - 3493229 + g 82 -7.4 -4.57569 | TTCTTCCTGGGCCTG TGCAATGG TGG CCAGTGCA TTTTTAGCACGCTCG yhbC 3494944 - 3494492 - | hypothetical protein TERM 4316 3494981 - 3494969 - H 93 -6.9 -5.80248 | opp_overlap 3494968 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4317 3495009 - 3495026 + H 71 -6.9 -4.0641 | opp_overlap 3495010, overlap 3495010 GTCAGATAACAAAAA ACCCCGA TAAA TCGGGGC TTTATATAACTGAAC TERM 4318 3495025 - 3495010 - H 100 -10.4 -5.60689 | opp_overlap 3495009 3495010 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 4319 3495010 - 3495025 + H 73 -10.4 -3.03525 | opp_overlap 3495010, overlap 3495009 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 4320 3496375 - 3496355 - g 77 -9.7 -3.59979 | overlap 3496359 3496369 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 4321 3496371 - 3496359 - g 75 -6.9 -4.44046 | overlap 3496355 3496369 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_3318 3495533 - 3496705 + | IS21 ORF1 SSON_3319 3496705 - 3497502 + | IS21 ORF2 argG 3497709 - 3499052 + | argininosuccinate synthase yhbX 3500667 - 3499060 - | putative alkaline phosphatase I TERM 4322 3501138 - 3501107 - R 91 -11 -4.32436 | opp_overlap 3501113 3501115, overlap 3501108 3501115 AGACCAGGACCAAAA CGAAAAAAGACGCT TTTC AGCGTCTCTTTTCT GGAATTTGGTACCGA TERM 4323 3501137 - 3501108 - R 90 -14.5 -3.18738 | opp_overlap 3501113 3501115, overlap 3501107 3501115 GACCAGGACCAAAAC GAAAAAAGACGCT TTTC AGCGTCTCTTTTC TGGAATTTGGTACCG TERM 4324 3501113 - 3501132 + r 75 -6.4 -4.44974 | opp_overlap 3501108 3501107 3501115, overlap 3501115 GGACCAAAACGAAAA AAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 4325 3501115 - 3501130 + r 76 -9 -3.82551 | opp_overlap 3501108 3501107 3501115, overlap 3501113 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT TERM 4326 3501130 - 3501115 - R 100 -9 -5.48054 | opp_overlap 3501115 3501113, overlap 3501108 3501107 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT TERM 4327 3501270 - 3501292 + r 76 -7.7 -4.32607 | GATATCGCTGGTCGG CTTAGCCGG AGCAG CTGGCTGAG TTTGTTCGGTTTTCG secG 3501578 - 3501246 - | preprotein translocase subunit SecG TERM 4328 3501758 - 3501736 - R 81 -3.5 -5.41746 | gap 1 AACTGCGGAAAAAAA CAGCAAA-AC CGAT GTGTTCGCTG AGAAAAAAGGCGACA TERM 4329 3501779 - 3501767 - R 100 -9.1 -5.24129 | opp_overlap 3501766 3501767, overlap 3501769 TTCGCTGAGAAAAAA GGCGA CAA TCGCC GCCTTTTTAGCCAGT TERM 4330 3501767 - 3501782 + r 74 -6 -4.60255 | opp_overlap 3501767 3501769, overlap 3501766 TTCGCTGAGAAAAAA GGCGAC AATC GCCGCC TTTTTAGCCAGTTAT glmM 3503143 - 3501806 - | phosphoglucosamine mutase TERM 4331 3502768 - 3502783 + g 76 -9 -3.74872 | CTTCGATGGCCTCTT CTACCG CATC CGGTAG TTTGGTGCCGTCGAT folP 3503984 - 3503136 - | dihydropteroate synthase TERM 4332 3503590 - 3503579 - G 70 -7.2 -4.0942 | opp_overlap 3503579 TATGCATCAGACAAA CCGG TAAA CCGG TTTCTGCAGCCGCCT TERM 4333 3504019 - 3504038 + r 87 -10.6 -4.18494 | opp_overlap 3504019 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA TERM 4334 3504038 - 3504019 - R 100 -12.8 -5.56673 | opp_overlap 3504019 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA hflB 3506008 - 3504074 - | ATP-dependent metalloprotease rrmJ 3506737 - 3506108 - | 23S rRNA methyltransferase J TERM 4335 3506904 - 3506887 - g 90 -4.9 -5.34309 | gap 1, overlap 3506892 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG yhbY 3506863 - 3507156 + | RNA-binding protein YhbY TERM 4336 3507242 - 3507269 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 3507249, overlap 3507249 CACGCTCTGTTCGTT GATAAAAGGCCGC ATA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4337 3507249 - 3507263 + T 100 -12.8 -5.13137 | opp_overlap 3507249, overlap 3507242 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA TERM 4338 3507263 - 3507249 - T 95 -12.8 -4.36914 | opp_overlap 3507249 3507242 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA greA 3507788 - 3507312 - | transcription elongation factor GreA TERM 4339 3507350 - 3507361 + g 72 -7.2 -4.25104 | CTTCAAATTCTACTT CGCC GCCC GGCG TTTTGATGACCACAA TERM 4340 3507903 - 3507890 - H 83 -2.4 -5.68023 | overlap 3507892 CCAGAAGCAAAAAAA TACC GACCCA GGTA CAAGTCCCAGGTCAG TERM 4341 3507918 - 3507892 - H 72 -5.8 -4.46828 | overlap 3507890 AGAAGCAAAAAAATA CCGACCCAGG TACAAGT CCCAGGTCAG CTACAATTCACATTT TERM 4342 3508844 - 3508828 - g 70 -5.8 -4.24326 | AAAGATGAGTTAAAA CAGGCG GGTAT CACCTG GAGCGGAACACTGCT dacB 3508036 - 3509469 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 4343 3509503 - 3509477 - T 100 -15.9 -4.71382 | opp_overlap 3509475 3509474, overlap 3509481 ACAATTAGTCAAAAA GAAACCCCGGC ACATG GCCGGGGCTTC AGATTATTGACAAAG TERM 4344 3509499 - 3509481 - T 100 -13.1 -4.89063 | opp_overlap 3509475 3509474, overlap 3509477 TTAGTCAAAAAGAAA CCCCGGC ACATG GCCGGGG CTTCAGATTATTGAC obgE 3510827 - 3509655 - | GTPase ObgE TERM 4345 3510005 - 3510021 + g 72 -7.9 -3.91506 | opp_overlap 3509996 3509995, overlap 3510003 3510007 ACCAACGCGGTTTCG CCGCCAG ATC CTGGCTG TATTTTTCCAGCTCG TERM 4346 3510007 - 3510019 + g 71 -9.1 -3.54256 | opp_overlap 3509996 3509995, overlap 3510005 3510003 CAACGCGGTTTCGCC GCCAG ATC CTGGC TGTATTTTTCCAGCT TERM 4347 3510389 - 3510403 + g 70 -5.6 -4.40804 | GCTCACGCTTATCAC CCGGCG TAC CGTTGG TTTTCTGCCGTGGTG yhbE 3511808 - 3510843 - | hypothetical protein TERM 4348 3511075 - 3511038 - G 76 -9.1 -3.74198 | gap 1, overlap 3511031 AAAAAACAGCGTAAA CAGTG-GGGTGAGCGTGA TGA TCGCGCTCACCTGCGCTG CCTGCCAGCGAGCCA TERM 4349 3511434 - 3511386 - G 74 -3.3 -5.00884 | gap 3, overlap 3511372 3511361 3511389 ACTGGTGTTAAAAAA CATCAC-CAGGCCGCTCAGGAGCA TCAA TGCCCCT-A-CAACCTGAGTGCTG CGCATTTTCTCTTTC TERM 4350 3511885 - 3511906 + r 100 -15.9 -3.794 | opp_overlap 3511885 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG TERM 4351 3511906 - 3511885 - R 100 -15.9 -4.75174 | opp_overlap 3511885 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG rpmA 3512192 - 3511935 - | 50S ribosomal protein L27 rplU 3512524 - 3512213 - | 50S ribosomal protein L21 TERM 4352 3513322 - 3513294 - g 70 -5.1 -4.3586 | opp_overlap 3513312 TTATCTATAGCAAAA CCGCGCGTCTG TTTGAGG CTGCCGCGCAG TGTTCCGGGATTCTG ispB 3512783 - 3513754 + | octaprenyl diphosphate synthase TERM 4353 3513768 - 3513786 + F 90 -16 -2.7386 | AATCCCCTCCCTTCA TCCCGCGC AGT GCGCGGGA TGATTCCAGTAAATT nlp 3513983 - 3514261 + | DNA-binding transcriptional regulator Nlp murA 3515568 - 3514309 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4354 3515066 - 3515088 + g 86 -10.6 -3.92075 | opp_overlap 3515064 GCAGCACACATGATG GTCACCGTTG CGC CAACGCTGAC TTTATCCATCACGAT yrbA 3515892 - 3515623 - | hypothetical protein TERM 4355 3515719 - 3515742 + g 76 -3.8 -5.00884 | CGCAATATATTCCAT CAGCGGGC CATAGACC GTCTGCTG TTTTTTAACCCGACT TERM 4356 3515977 - 3515953 - R 85 -7.2 -5.05712 | gap 1, overlap 3515972 ATAAATAAGCAAAAA GCCTCG-CTGA TAAA TCAGACAAGGC TCGACTTGCAGGCAG yrbB 3516426 - 3516037 - | hypothetical protein yrbC 3516965 - 3516330 - | hypothetical protein TERM 4357 3516488 - 3516501 + gr 70 -4.5 -4.57569 | overlap 3516489 CGTAAGCCTGCCAGT TTCCC GTCT GGGAG TTTTTACGCCACTGG yrbD 3517535 - 3516984 - | hypothetical protein TERM 4358 3517489 - 3517470 - G 72 -5.6 -4.46112 | CTTCAGGCAAACAAA CAGCGCCG CCAG CAGTGCTG CTAATAAAAAGATAC yrbE 3518322 - 3517540 - | hypothetical protein yrbF 3519139 - 3518330 - | putative ABC transporter ATP-binding protein YrbF TERM 4359 3519850 - 3519873 + G 90 -7.4 -4.87665 | gap 1 CTTGCAGAGCTGCCG CGTGAC-GGCG GAT TGCCCGTCGCG TTTTTATGGCTCGGC TERM 4360 3520072 - 3520059 - g 72 -6.7 -4.24002 | TCGCAAAGGTGAAAA CGACA TTGC TGTCG GAAATATCATTGGCG TERM 4361 3520187 - 3520198 + G 70 -4.4 -4.47888 | ACTACAGCGTGATGT TGCT GGTG AGCA TTATTTTTGCGTTGC yrbG 3519349 - 3520326 + | putative calcium/sodium:proton antiporter TERM 4362 3521256 - 3521274 + G 84 -11 -3.74519 | ATATCACCTCCGTGA TGGTTGCC GAT GGCGACCA TTTACTCGGAGTGTT yrbH 3520340 - 3521326 + | D-arabinose 5-phosphate isomerase TERM 4363 3521673 - 3521653 - g 82 -7.5 -4.46112 | opp_overlap 3521657, overlap 3521655 GGGCAGTCAAACAAA CTGATCGCC TTT AGCGATCTG CTGGAAAAACTGGCG yrbI 3521347 - 3521913 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 4364 3522002 - 3521991 - gf 70 -3.6 -4.59109 | GATATGGCCGAAAAA GACG ATAC CGCC CAGGTGGTCGTCAAC yrbK 3521910 - 3522485 + | hypothetical protein TERM 4365 3522993 - 3522979 - gf 71 -3.4 -4.80417 | overlap 3522980 GACAAAAACAACAAA GGCCAG ACC CCGGCA CAGAAGAAGGGTAAT yhbN 3522454 - 3523011 + | hypothetical protein yhbG 3523018 - 3523743 + | putative ABC transporter ATP-binding protein YhbG TERM 4366 3524426 - 3524416 - g 75 -6.8 -4.42788 | CCCAATTCGATAAAA CCAC GCC GTGG CTGGAAGAGGCCAGA rpoN 3523791 - 3525224 + | RNA polymerase factor sigma-54 yhbH 3525247 - 3525534 + | putative sigma(54) modulation protein TERM 4367 3525562 - 3525588 + F 95 -13 -3.93236 | overlap 3525563 TTAGCATGTGCATGG CGGCCTGTTGTG CGG CACAACGGGCCA TTTGTACGGTTAATG TERM 4368 3525563 - 3525587 + F 100 -16.5 -2.95459 | overlap 3525562 TAGCATGTGCATGGC GGCCTGTTGTG CGG CACAACGGGCC ATTTGTACGGTTAAT TERM 4369 3525787 - 3525799 + G 81 -6.9 -4.61231 | overlap 3525783 AAACAACTTAGCCTG CCGCC TCA GGTGG TTTTTGAAGCTATCC TERM 4370 3525897 - 3525907 + G 81 -8.2 -4.42238 | overlap 3525898 3525902 AGAAGATACTCTGCG CGCC GTT GGCG TTTTCGTTCAGCTCG ptsN 3525652 - 3526143 + | sugar-specific enzyme IIA component of PTS TERM 4371 3526197 - 3526183 - f 74 -8.6 -3.96148 | CGTTGTGAGGAGAAA CAGTAC ATG GTACTG ATGATCGTCAGCGGA yhbJ 3526189 - 3527043 + | hypothetical protein TERM 4372 3527097 - 3527072 - g 88 -11.1 -4.13654 | overlap 3527075 TGTTGAAATCACAAA CAAGCTGGGCA TGCA TGCCCGGCCTG CAATGAAGCTGTTTG TERM 4373 3527094 - 3527075 - g 82 -9.2 -4.1851 | overlap 3527072 TGAAATCACAAACAA GCTGGGCA TGCA TGCCCGGC CTGCAATGAAGCTGT ptsO 3527040 - 3527312 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4374 3527300 - 3527321 + F 72 -10.3 -2.75963 | overlap 3527299 CTTTAACTCTGGTTT TGATGAAGA TTAA TCTTCATCA CTTTGACATACAACT yrbL 3527526 - 3528158 + | hypothetical protein mtgA 3528883 - 3528155 - | monofunctional biosynthetic peptidoglycan transglycosylase yhbL 3529542 - 3528880 - | isoprenoid biosynthesis protein TERM 4375 3529743 - 3529765 + r 82 -5.4 -5.19261 | overlap 3529744 3529746 TGGCGCAGTATTCGC GCACCCCGGT CTA GCCGGGGTCA TTTTTTAGTGGCTTT TERM 4376 3529744 - 3529764 + r 76 -8.9 -3.6993 | overlap 3529743 3529746 GGCGCAGTATTCGCG CACCCCGGT CTA GCCGGGGTC ATTTTTTAGTGGCTT TERM 4377 3529746 - 3529762 + r 79 -11.5 -3.41701 | overlap 3529744 3529743 CGCAGTATTCGCGCA CCCCGGT CTA GCCGGGG TCATTTTTTAGTGGC arcB 3532099 - 3529763 - | aerobic respiration control sensor protein ArcB TERM 4378 3530160 - 3530176 + g 70 -6.5 -4.2704 | GTACTCTCCTCATCA TCCTGGG TAT CCCAGAA TTTCTTGATCATCGC TERM 4379 3531496 - 3531520 + g 79 -5 -4.92239 | opp_overlap 3531496 CCGGTGAGTAAACAT CAACAGGTTT CAGGT GAACCAGTTG TTTTTCGCTTTTTCC yhcC 3533124 - 3532195 - | hypothetical protein TERM 4380 3533423 - 3533439 + H 71 -7.3 -4.03978 | opp_overlap 3533425 AACACGCCTTTATGA CAGTCAG GAA TTGACTG TTTCTCTAACGACTT TERM 4381 3533602 - 3533620 + H 76 -11.8 -2.71918 | overlap 3533601 3533600 3533604 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 4382 3534371 - 3534389 + G 70 -4.5 -4.56961 | gap 1, overlap 3534375 TAAAGGTCTGTGTAT GC-CGGCG GATC TGCCGCGC TTTTATCTGGATCTT TERM 4383 3534804 - 3534829 + G 72 -11.1 -3.08508 | overlap 3534797 3534801 GAGCCGTGGGATGGC CCGGCGGGCAT CGTG ATGTCCGACGG TCGTTTTGCCGCCTG TERM 4384 3534976 - 3534963 - g 72 -5.2 -4.58283 | GAAGTGGTCGAAAAA GGCC GCGTCG GGCC AGGCGAACTGATGGT TERM 4385 3537437 - 3537410 - g 70 -6.2 -4.1899 | opp_overlap 3537432, overlap 3537413 CTACTGCACCGAAAA CAACCCGCCGTT TGAT AACGGCCTGCTG AACGCGCAGTTGCTG gltB 3533706 - 3538259 + | glutamate synthase subunit alpha TERM 4386 3538732 - 3538716 - g 74 -2.1 -5.07107 | opp_overlap 3538726, overlap 3538718 CAAACCGGTAAAAAA GTGGCGA TTA TCGGCGC AGGCCCGGCAGGTCT TERM 4387 3539046 - 3539024 - g 74 -7.6 -4.07568 | overlap 3539030 CGGCGGGCTGGAAAA CGAAGACGCC GAT GGCGTGTACG CAGCGCTGCCGTTCC gltD 3538272 - 3539690 + | glutamate synthase subunit beta TERM 4388 3540200 - 3540178 - T 100 -16.4 -3.6106 | overlap 3540189 TTCAACATGTTGAAA TTCGCCAGAC AGT GTCTGGCGAA TTAACACCATTGGGA TERM 4389 3540251 - 3540205 - T 100 -16 -3.33696 | overlap 3540189 3540207 TGTCTGGCGAATTAA CACCATTGGGAATTCCGCAGAC ACC ATCTGCAGAATTCCCATCGGCA AAGATTTGGCAGACG TERM 4390 3540249 - 3540207 - T 100 -18.6 -3.23853 | overlap 3540189 3540205 TCTGGCGAATTAACA CCATTGGGAATTCCGCAGAC ACC ATCTGCAGAATTCCCATCGG CAAAGATTTGGCAGA TERM 4391 3540280 - 3540254 - T 88 -12.4 -3.57263 | overlap 3540256 ATTCCCATCGGCAAA GATTTGGCAGAC GCT GTCTGCCAAATT GAGAGGCTGTTTGAT TERM 4392 3540278 - 3540256 - T 100 -15 -3.36515 | overlap 3540254 TCCCATCGGCAAAGA TTTGGCAGAC GCT GTCTGCCAAA TTGAGAGGCTGTTTG yhcH 3541215 - 3540751 - | hypothetical protein yhcI 3542087 - 3541212 - | N-acetylmannosamine kinase yhcJ 3542773 - 3542084 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 4393 3542813 - 3542794 - R 72 -10.7 -2.78679 | overlap 3542793 TTCCCTTAGCGAAAG GCCCGGT ACATAG ACCGGGC AACAGGATTAACTTT nanT 3544311 - 3542821 - | putative sialic acid transporter TERM 4394 3544324 - 3544345 + r 95 -12.3 -3.8377 | gap 1 CATTGTGAGTCTCCC GCG-GTGGGC GAT GCCCACACGC TTTGGTATGAAAATT TERM 4395 3544423 - 3544373 - R 74 -11.2 -2.89683 | opp_overlap 3544403 3544405 ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAACAACTCA CCCGCGCTCTTGCAT nanA 3545314 - 3544421 - | N-acetylneuraminate lyase yhcK 3546227 - 3545436 - | transcriptional regulator NanR TERM 4396 3547284 - 3547273 - g 82 -3 -5.24129 | GCTTTTGACAAAAAA GATA AAAA TATC AATCACGAACAGGCA yhcL 3546607 - 3547929 + | putative cryptic C4-dicarboxylate transporter DcuD TERM 4397 3547941 - 3547971 + T 85 -12.7 -3.33696 | opp_overlap 3547941 3547943 3547948, overlap 3547943 3547948 TTAAGTCATTAAAAA GACAAAACAGGCC GCCTG GGCCTGTTTTGTA TTACTTCACAACACG TERM 4398 3547971 - 3547941 - T 100 -12.7 -4.77157 | opp_overlap 3547941 3547943 3547948, overlap 3547943 3547948 TTAAGTCATTAAAAA GACAAAACAGGCC GCCTG GGCCTGTTTTGTA TTACTTCACAACACG TERM 4399 3547943 - 3547969 + T 100 -15.3 -3.23853 | opp_overlap 3547941 3547943 3547948, overlap 3547941 3547948 AAGTCATTAAAAAGA CAAAACAGGCC GCCTG GGCCTGTTTTG TATTACTTCACAACA TERM 4400 3547969 - 3547943 - T 100 -15.3 -3.9993 | opp_overlap 3547943 3547941 3547948, overlap 3547941 3547948 AAGTCATTAAAAAGA CAAAACAGGCC GCCTG GGCCTGTTTTG TATTACTTCACAACA TERM 4401 3547948 - 3547964 + T 93 -9.4 -4.73864 | opp_overlap 3547943 3547941 3547948, overlap 3547943 3547941 ATTAAAAAGACAAAA CAGGCC GCCTG GGCCTG TTTTGTATTACTTCA TERM 4402 3547964 - 3547948 - T 100 -9.4 -5.00027 | opp_overlap 3547948 3547943 3547941, overlap 3547943 3547941 ATTAAAAAGACAAAA CAGGCC GCCTG GGCCTG TTTTGTATTACTTCA sspB 3548469 - 3547972 - | ClpXP protease specificity-enhancing factor sspA 3549113 - 3548475 - | stringent starvation protein A TERM 4403 3549456 - 3549469 + r 100 -9.5 -5.18357 | opp_overlap 3549456, overlap 3549448 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGTAAATTG TERM 4404 3549469 - 3549456 - R 100 -9.5 -5.64274 | opp_overlap 3549456 3549448 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGTAAATTG TERM 4405 3549476 - 3549513 + r 79 -10.7 -3.54424 | opp_overlap 3549482, overlap 3549448 CGAAGCGGGTTTTTT CGTAAATTGTTTTCTGC CGGA GCAGAAGCCAATTAACG TTTGGAGAACTGCGG rpsI 3549900 - 3549508 - | 30S ribosomal protein S9 rplM 3550344 - 3549916 - | 50S ribosomal protein L13 TERM 4406 3550206 - 3550221 + g 70 -6.8 -4.05446 | CACCGGTATCTACGT GCGGAG TGTA TTCCGC TTTGTGCTTACCGCG TERM 4407 3550522 - 3550540 + r 100 -8.8 -5.06735 | opp_overlap 3550520 GATTATAGAGAAGTC GGGGTCAA AGA TCGACCCC TTTTTGTGATTTGTG yhcM 3551690 - 3550563 - | hypothetical protein TERM 4408 3551527 - 3551565 + g 76 -12.4 -2.5007 | overlap 3551526 3551529 CACAGCTTACCGACC CGCGCCATTAGCCCAC TCGTCCT GGGGGCTGGTGGCGTG CTATTGATGAGTTCC TERM 4409 3551529 - 3551563 + g 73 -11.4 -2.78266 | overlap 3551527 3551526 CAGCTTACCGACCCG CGCCATTAGCCCAC TCGTCCT GGGGGCTGGTGGCG TGCTATTGATGAGTT TERM 4410 3552145 - 3552122 - g 100 -13.2 -4.13282 | opp_overlap 3552122 AGCACATGGCGAAAA GTTCCAGCAG CCTG CTGCCGGAAC TGTCTGCTGAAGCAA TERM 4411 3552122 - 3552145 + G 71 -11 -2.94099 | opp_overlap 3552122 AGCACATGGCGAAAA GTTCCAGCAG CCTG CTGCCGGAAC TGTCTGCTGAAGCAA yhcB 3551878 - 3552282 + | cytochrome d ubiquinol oxidase subunit III TERM 4412 3552293 - 3552311 + F 79 -12.4 -2.83517 | ACTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTCTCCCT TERM 4413 3552456 - 3552445 - g 82 -2.2 -5.37865 | GGAATAATGAAAAAA CAAC CCCA GCTG TTGAGTGCATTAGCG degQ 3552436 - 3553803 + | serine endoprotease TERM 4414 3553813 - 3553842 + F 73 -10.7 -3.11192 | opp_overlap 3553813, overlap 3553807 CGTTAATGTCGTAAA CCGGGCATCAGGC TTAC GTGTGATGTCCGG TTAACTCGTGGTATG TERM 4415 3554660 - 3554633 - g 78 -10.6 -3.42124 | gap 1, opp_overlap 3554647, overlap 3554627 CAAAATTATGGATAA GCTGATC-CGCGA TGG TCGCGTGATCCGC GGCTACATTGGCATT degS 3553893 - 3554960 + | serine endoprotease TERM 4416 3555000 - 3555029 + T 89 -9.3 -4.59109 | overlap 3555002 GGAGTCTGTGCTCTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4417 3555002 - 3555027 + T 100 -16.3 -3.90762 | overlap 3555000 AGTCTGTGCTCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_3377 3556357 - 3555011 - | IS4 orf TERM 4418 3556347 - 3556372 + g 73 -9.1 -3.61398 | opp_overlap 3556347 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4419 3556372 - 3556347 - G 100 -9.8 -5.61596 | opp_overlap 3556347 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4420 3556480 - 3556492 + r 70 -9.1 -3.42809 | opp_overlap 3556472, overlap 3556479 TTATTAACGAACTCT TCGCC CAA GGCGA TATCTTTCTTGAGTG mdh 3557399 - 3556461 - | malate dehydrogenase argR 3557834 - 3558304 + | arginine repressor TERM 4421 3558307 - 3558337 + F 73 -9.6 -3.3516 | overlap 3558306 CCAGGAGCTTTAATC TCTGCCCCGTCGCT TCT GGCGGCGGGGAAAA TGTTGCTTATTCCTC yhcN 3558618 - 3558932 + | hypothetical protein TERM 4422 3558960 - 3558976 + T 100 -15.1 -5.78622 | opp_overlap 3558958 TTGTCCGACGATATT GCCCCCG GTT CGGGGGC TTTTTTTTGCGCTAA yhcO 3559260 - 3558988 - | hypothetical protein TERM 4423 3559326 - 3559344 + r 95 -12.4 -4.29176 | opp_overlap 3559326 ATAGCCATGAAAAAA CCGACGCT TTT GGCGTCGG TTTTGACTTAACTAT TERM 4424 3559344 - 3559326 - R 100 -11.7 -5.17353 | opp_overlap 3559326 ATAGCCATGAAAAAA CCGACGC TTTTG GCGTCGG TTTTGACTTAACTAT yhcP 3561319 - 3559352 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 3562257 - 3561325 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4425 3562030 - 3562044 + g 76 -4.2 -5.0133 | CGGCTGGTCGATGGT GAACAG TAT CTGTCC TTTTTTCACCAGCTG yhcR 3562468 - 3562265 - | hypothetical protein TERM 4426 3563334 - 3563362 + r 70 -8.8 -3.36327 | gap 1, opp_overlap 3563324 3563334 3563333 ATCAACGAGATCAAT CGCGGTGAGCTGG AGAT CCTGCT-GCCGCG TTATCAGTCAGATCC tldD 3565089 - 3563644 - | protease TldD TERM 4427 3564499 - 3564470 - G 74 -6.3 -4.50661 | gap 1, opp_overlap 3564486 AACTCATAACCAAAA CGACCGCCGCCGCC ACT GGC-ACCGCGTTCG CGTTTGCCATCTTCT TERM 4428 3564573 - 3564537 - G 81 -10.8 -3.65827 | gap 1 GAACGCTCACGGAAA GACGCACCAGCGGACGG ACAT CCG-CCGCTAGCGTGCC GTCGGTGGCCGCAAC yhdRP 3569045 - 3565245 - | hypothetical protein TERM 4429 3565863 - 3565874 + g 74 -5.8 -4.54727 | opp_overlap 3565844 GGCGGCATCAATTTT CTGC CCGC GCAG TTTTCCTTTCAGCGA cafA 3570582 - 3569113 - | ribonuclease G TERM 4430 3569741 - 3569756 + g 82 -9 -4.20136 | AGTTCTACTTTGCGT TCCAGC GCTC GCTGGA TTTCGTTTTCGACAT TERM 4431 3570169 - 3570152 - G 75 -11.3 -3.01924 | overlap 3570163 GATTCGCTTTCAATA CGTTGGG AAAC CCCAACG TGAGAAGCCCCTGGC yhdE 3571165 - 3570572 - | Maf-like protein mreD 3571662 - 3571174 - | rod shape-determining protein MreD mreC 3572765 - 3571662 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4432 3572442 - 3572471 + g 76 -7.7 -4.27117 | opp_overlap 3572444, overlap 3572450 ACGCAGCGGGGAACC CAGCAGCTCGCGC AGAC GCGCGTTCTCCTG TTTGTATTGTCCAAG TERM 4433 3572450 - 3572463 + g 73 -9.5 -3.59627 | opp_overlap 3572444, overlap 3572442 GGGAACCCAGCAGCT CGCGC AGAC GCGCG TTCTCCTGTTTGTAT TERM 4434 3572824 - 3572791 - R 72 -10.3 -2.78596 | opp_overlap 3572786, overlap 3572794 3572805 TATTCTCGTATCAGA CCAGGCAGGGTAAAC AGAC ATTTCCCCTGCCTGC ATCCGATTACTCTTC TERM 4435 3572821 - 3572794 - R 71 -10.6 -2.66316 | opp_overlap 3572786, overlap 3572791 3572805 TCTCGTATCAGACCA GGCAGGGTAAAC AGAC ATTTCCCCTGCC TGCATCCGATTACTC mreB 3573934 - 3572831 - | regulator of ftsI TERM 4436 3573643 - 3573626 - G 72 -8.3 -3.73647 | opp_overlap 3573626 3573628 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4437 3573626 - 3573643 + g 74 -8.3 -3.90291 | opp_overlap 3573626, overlap 3573628 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4438 3573628 - 3573641 + g 71 -9.5 -3.54146 | opp_overlap 3573626, overlap 3573626 CAGTCACGAAGAAGT CGGCG ATAA CGCCG TCTTTCATTGGGCGA yhdA 3576119 - 3574179 - | regulatory protein CsrD TERM 4439 3574897 - 3574880 - G 72 -8.3 -3.85698 | CCGGTTTTTGATAAA GGCGCGG GCCG CCGCGAC TGAGCATTTGCTCGA TERM 4440 3576980 - 3577032 + G 70 -5.7 -4.33819 | gap 3, overlap 3576973 ATTACGGCGGCTGCG TGGCG-GCCTGTGGTCTGGC-GGGTG GTTT TACTCTGCCA-ACCACGGTCATGCCA TTTATTCTGCGTAAT yhdH 3576271 - 3577245 + | putative dehydrogenase SSON_3395 3577404 - 3577303 - | hypothetical protein accB 3578223 - 3578693 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit accC 3578704 - 3580053 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4441 3580089 - 3580073 - f 100 -13.7 -4.19276 | opp_overlap 3580073 GCAAAAGCGCCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG TERM 4442 3580073 - 3580089 + F 100 -13.7 -5.5112 | opp_overlap 3580073 GCAAAAGCGCCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG yhdT 3580162 - 3580404 + | hypothetical protein TERM 4443 3580911 - 3580923 + G 70 -10.5 -2.71791 | overlap 3580901 3580910 GCATTGCGTTGTATA CCGCC TTT GGCGG CTTTCGCGCCAGCGT panF 3580394 - 3581845 + | sodium/panthothenate symporter TERM 4444 3581920 - 3581948 + G 77 -8.9 -4.11216 | opp_overlap 3581885 3581929, overlap 3581921 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 4445 3581921 - 3581947 + G 79 -12.4 -3.06515 | opp_overlap 3581885 3581929, overlap 3581920 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3581857 - 3582738 + | ribosomal protein L11 methyltransferase TERM 4446 3582832 - 3582792 - f 90 -9.9 -4.43189 | opp_overlap 3582790 AGCAAGCTCACAAAA GGCACGTAAATTTGC CGGTTATTTAC GCAAATTTGCGTGCC AAAATTTTCATTCAT TERM 4447 3582872 - 3582857 - f 81 -3.3 -5.38958 | opp_overlap 3582857 3582866, overlap 3582868 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTTGAGTGTA TERM 4448 3583032 - 3583018 - f 76 -4.2 -5.00884 | overlap 3583019 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG yhdG 3583067 - 3584032 + | tRNA-dihydrouridine synthase B fis 3584058 - 3584354 + | DNA-binding protein Fis TERM 4449 3584409 - 3584384 - f 74 -6 -4.7254 | opp_overlap 3584384 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4450 3584384 - 3584409 + F 100 -8.2 -5.29782 | opp_overlap 3584384 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4451 3585275 - 3585261 - g 88 -5.6 -5.21683 | AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCCGGTT yhdJ 3584440 - 3585324 + | putative methyltransferase yhdU 3585408 - 3585587 + | hypothetical protein envR 3586252 - 3585590 - | DNA-binding transcriptional regulator EnvR acrE 3586651 - 3587808 + | AcrE SSON_3408 3591150 - 3591653 + | IS1 ORF TERM 4452 3591798 - 3591816 + F 83 -10.3 -3.695 | opp_overlap 3591786 3591795 3591793, overlap 3591796 CACGCGTAAATATTT TGCGCCA AAATG TGGCGCA TGTTTCATTTTCGCA TERM 4453 3591967 - 3591951 - f 87 -9.5 -4.27259 | opp_overlap 3591953, overlap 3591964 CACAGACAGGTAAAA GACGTTT CCC AAACGTC CTATAACGATAATTT yhdW 3592110 - 3593027 + | putative periplasmic binding transport protein TERM 4454 3593044 - 3593065 + F 85 -13.7 -3.07233 | opp_overlap 3593043 3593046, overlap 3593046 3593061 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC TERM 4455 3593046 - 3593063 + F 73 -10.5 -3.09135 | opp_overlap 3593043 3593046, overlap 3593044 3593061 GGTGTGAGGTAACGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT TERM 4456 3593613 - 3593637 + F 74 -7.1 -4.30933 | TCGTGGGCTTTATAT TCCGTCACC GCAGCTG GGAGACGGA TTTATTGCGTTTATC TERM 4457 3593751 - 3593721 - f 76 -8.2 -4.13077 | opp_overlap 3593731, overlap 3593731 AACATACCAGATAAA GACCGGACAACTGC GCC GCACCTGGCCGATC GCCGCAGTGTTGATC yhdY 3594283 - 3595389 + | putative transport system permease protein yhdZ 3595397 - 3596155 + | putative ATP-binding component of a transport system TERM 4458 3596201 - 3596182 - f 100 -13.6 -5.0925 | opp_overlap 3596171 3596182 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4459 3596182 - 3596201 + F 100 -13.6 -3.83214 | opp_overlap 3596182, overlap 3596171 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4460 3596592 - 3596613 + F 74 -8.7 -3.91196 | opp_overlap 3596583 GCAAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4461 3599080 - 3599092 + F 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4462 3599697 - 3599734 + F 93 -6.3 -5.68438 | opp_overlap 3599693 3599699, overlap 3599699 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4463 3599699 - 3599732 + F 86 -8.9 -4.47052 | opp_overlap 3599693 3599699, overlap 3599697 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4464 3599732 - 3599699 - f 75 -6.7 -4.49756 | opp_overlap 3599699 3599697, overlap 3599693 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4465 3601744 - 3601756 + F 71 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG yrdA 3601820 - 3602590 + | putative transferase yrdB 3602823 - 3602566 - | hypothetical protein aroE 3603638 - 3602820 - | shikimate 5-dehydrogenase yrdC 3604215 - 3603643 - | putative ribosome maturation factor TERM 4466 3604275 - 3604265 - R 72 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 4467 3604636 - 3604600 - R 73 -9.5 -3.34233 | overlap 3604603 3604629 CCAGAACTTTGACAA TATGTCCATCCGCTGAA GAT TTCAGAAGACGGACGTA GTCACACGCCGGATA TERM 4468 3604633 - 3604603 - R 73 -11.2 -2.53747 | overlap 3604600 3604629 GAACTTTGACAATAT GTCCATCCGCTGAA GAT TTCAGAAGACGGAC GTAGTCACACGCCGG smg 3605264 - 3604791 - | hypothetical protein TERM 4469 3605099 - 3605117 + gr 74 -6 -4.57569 | TCGGTTCTGCCAACC CTTCCTGA TAA TCAGCAAG TTTTTCCAGCCATAG smf 3606360 - 3605236 - | hypothetical protein def 3606490 - 3606999 + | peptide deformylase TERM 4470 3607060 - 3607082 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 4471 3607162 - 3607152 - g 74 -3.2 -5.02074 | GGACGCGGTAAAAAA CTGA TGC CCAG CCCGGTTAAAGTTCT fmt 3607014 - 3607961 + | methionyl-tRNA formyltransferase TERM 4472 3607977 - 3607995 + F 100 -10.2 -5.01535 | overlap 3607978 TAGTCCACTCTTCTA AGCCCGGT CTT ACCGGGCA TTTTTATACTTATGA TERM 4473 3607978 - 3607994 + F 93 -13.7 -3.59837 | overlap 3607977 AGTCCACTCTTCTAA GCCCGGT CTT ACCGGGC ATTTTTATACTTATG TERM 4474 3608032 - 3608016 - g 88 -5.1 -5.17353 | overlap 3608019 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCCCAGGC TERM 4475 3608029 - 3608019 - g 75 -5.4 -4.67552 | overlap 3608016 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCCCA TERM 4476 3608155 - 3608169 + G 77 -10 -3.60971 | opp_overlap 3608124 AAGAGTTGTGCTTTG GCGTAC TGC GTACGC TTTCGCAGTTAGACT TERM 4477 3608897 - 3608880 - g 75 -7 -4.33151 | CACGACAATTTAAAA CGCCTT GGTATG AAGGCG ACCGTGAAACAAGGT sun 3608007 - 3609296 + | 16S rRNA methyltransferase B trkA 3609318 - 3610694 + | potassium transporter peripheral membrane component TERM 4478 3610696 - 3610723 + F 100 -15.8 -3.89938 | opp_overlap 3610699 3610702, overlap 3610699 3610702 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT TERM 4479 3610720 - 3610699 - f 86 -13.1 -3.33696 | opp_overlap 3610696 3610699 3610702, overlap 3610702 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4480 3610699 - 3610720 + F 95 -13.1 -4.05629 | opp_overlap 3610699 3610702, overlap 3610696 3610702 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4481 3610717 - 3610702 - f 83 -10.4 -3.81146 | opp_overlap 3610699 3610696 3610702, overlap 3610699 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4482 3610702 - 3610717 + F 87 -10.4 -4.13254 | opp_overlap 3610702 3610699, overlap 3610699 3610696 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT mscL 3610824 - 3611234 + | large-conductance mechanosensitive channel TERM 4483 3611297 - 3611251 - T 93 -16.1 -2.90992 | overlap 3611254 AAGCGCCTGAAAGCA GAAGACCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCCCGATTG TERM 4484 3611294 - 3611254 - T 93 -14.2 -3.60151 | overlap 3611251 CGCCTGAAAGCAGAA GACCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCCCGA yhdL 3611449 - 3611231 - | hypothetical protein zntR 3611930 - 3611505 - | zinc-responsive transcriptional regulator TERM 4485 3611593 - 3611567 - G 70 -5.9 -4.26871 | gap 1, overlap 3611559 3611569 GAATCGAGCAATAAA CACTGCTATGGG CGGT CCCACAACAG-G CATCGTTAAGGCGTT TERM 4486 3611592 - 3611569 - G 76 -9.6 -3.72775 | overlap 3611559 3611567 ATCGAGCAATAAACA CTGCTATGGG CGGT CCCACAACAG GCATCGTTAAGGCGT yhdN 3612309 - 3611941 - | hypothetical protein TERM 4487 3612372 - 3612405 + r 90 -14.1 -3.37879 | opp_overlap 3612382, overlap 3612382 TGGGGATACTACGGG TATAAAAAAACCCGC CGGG GCGGGTTTTTTTACA TTGCTTCAGATTACT TERM 4488 3612382 - 3612395 + r 100 -9.5 -5.54192 | opp_overlap 3612382, overlap 3612372 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACATTGCT TERM 4489 3612395 - 3612382 - R 100 -9.5 -5.61596 | opp_overlap 3612382 3612372 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACATTGCT TERM 4490 3612426 - 3612436 + r 71 -6.8 -4.0371 | overlap 3612406 3612405 TCAGATTACTCTGCA GCAG CTT CTGC TTTCTCTGAACGATC rplQ 3612799 - 3612416 - | 50S ribosomal protein L17 rpoA 3613829 - 3612840 - | DNA-directed RNA polymerase subunit alpha TERM 4491 3612923 - 3612935 + g 74 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCAAGGTT TERM 4492 3613870 - 3613852 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3614475 - 3613855 - | 30S ribosomal protein S4 TERM 4493 3613965 - 3613975 + g 70 -6.8 -4.12188 | overlap 3613962 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4494 3614502 - 3614520 + r 76 -4.4 -5.00616 | opp_overlap 3614493 3614502 AACAAACCTGGAAAA CGAGGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3614898 - 3614509 - | 30S ribosomal protein S11 TERM 4495 3614932 - 3614957 + r 70 -8.9 -3.39449 | overlap 3614933 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 4496 3614933 - 3614956 + r 71 -10.2 -2.63348 | overlap 3614932 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG rpsM 3615271 - 3614915 - | 30S ribosomal protein S13 TERM 4497 3615096 - 3615114 + g 77 -8.8 -4.05446 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTCCTTCAGACA TERM 4498 3615388 - 3615359 - R 100 -12.3 -4.6645 | gap 1 CACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 3615534 - 3615418 - | 50S ribosomal protein L36 secY 3616897 - 3615566 - | preprotein translocase subunit SecY TERM 4499 3616099 - 3616053 - G 73 -9.4 -3.56921 | opp_overlap 3616059 3616067, overlap 3616051 GGGAACAGAATAATA CTGGAAGCGAAGATTGCCGGGA TTA CCCCCGCCATATTCACTTTCAG CGGTAAATGTGTGCT rplO 3617339 - 3616905 - | 50S ribosomal protein L15 TERM 4500 3617285 - 3617298 + g 75 -5.2 -4.59853 | opp_overlap 3617278, overlap 3617278 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3617522 - 3617343 - | 50S ribosomal protein L30 rpsE 3618029 - 3617526 - | 30S ribosomal protein S5 rplR 3618397 - 3618044 - | 50S ribosomal protein L18 rplF 3618940 - 3618407 - | 50S ribosomal protein L6 rpsH 3619345 - 3618953 - | 30S ribosomal protein S8 rpsN 3619684 - 3619379 - | 30S ribosomal protein S14 rplE 3620238 - 3619699 - | 50S ribosomal protein L5 TERM 4501 3620076 - 3620094 + g 93 -6 -5.24531 | TTGCTGCCAGGTCTG CTGCTG CGTTATC CAGCAG TTTTTTGTCAGCGAT TERM 4502 3620182 - 3620193 + g 81 -4.4 -5.12617 | opp_overlap 3620182, overlap 3620161 AGAATTGTAGTTAAA CTCA GTCA TGAG TTTTTTAACTACTTC rplX 3620567 - 3620253 - | 50S ribosomal protein L24 rplN 3620949 - 3620578 - | 50S ribosomal protein L14 TERM 4503 3621087 - 3621064 - R 100 -14 -5.252 | opp_overlap 3621064 3621067 TATGGGTAGAAAAAA TAACGGCTCA TTTC TGAGCCGTTA TTCGTATCGAGAGAG TERM 4504 3621064 - 3621087 + r 86 -14 -3.25823 | opp_overlap 3621064, overlap 3621067 TATGGGTAGAAAAAA TAACGGCTCA TTTC TGAGCCGTTA TTCGTATCGAGAGAG TERM 4505 3621067 - 3621084 + r 86 -11.3 -3.7732 | opp_overlap 3621064, overlap 3621064 GGGTAGAAAAAATAA CGGCTCA TTTC TGAGCCG TTATTCGTATCGAGA rpsQ 3621366 - 3621112 - | 30S ribosomal protein S17 TERM 4506 3621334 - 3621287 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 3621306 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA rpmC 3621557 - 3621366 - | 50S ribosomal protein L29 rplP 3621967 - 3621557 - | 50S ribosomal protein L16 rpsC 3622681 - 3621980 - | 30S ribosomal protein S3 rplV 3623031 - 3622699 - | 50S ribosomal protein L22 rpsS 3623324 - 3623046 - | 30S ribosomal subunit protein S19 rplB 3624162 - 3623341 - | 50S ribosomal protein L2 TERM 4507 3624198 - 3624218 + r 75 -9.7 -3.57462 | opp_overlap 3624201, overlap 3624201 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3624482 - 3624180 - | 50S ribosomal protein L23 TERM 4508 3624449 - 3624437 - G 78 -9.1 -3.85817 | ACGCTTTTTCAGAAA CGTGC GGT GCACG CAGCACCTTCAGCAG rplD 3625084 - 3624479 - | 50S ribosomal protein L4 TERM 4509 3625052 - 3625064 + g 78 -10.5 -3.42663 | opp_overlap 3625047, overlap 3625051 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3625724 - 3625095 - | 50S ribosomal protein L3 TERM 4510 3625686 - 3625700 + g 80 -5.6 -5.02074 | opp_overlap 3625687, overlap 3625687 GTCTTCTGTGAAGAT ACGGGT CAT ACCCGC TTTTTTACCGACTAA TERM 4511 3625687 - 3625699 + g 73 -9.1 -3.60762 | opp_overlap 3625687, overlap 3625686 TCTTCTGTGAAGATA CGGGT CAT ACCCG CTTTTTTACCGACTA rpsJ 3626068 - 3625757 - | 30S ribosomal protein S10 pinO 3626725 - 3626306 - | chromosome replication protein PioO TERM 4512 3626674 - 3626685 + g 77 -5.8 -4.59342 | opp_overlap 3626674 3626673 GTCGGGAGAAGATAC CAGG GTGA CCTG TTTCTTTCTGCTCAC SSON_3464 3628071 - 3627274 - | IS21 ORF2 SSON_3465 3629243 - 3628071 - | IS21 ORF1 TERM 4513 3628401 - 3628421 + g 77 -9.7 -3.59979 | overlap 3628397 3628405 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 4514 3628405 - 3628417 + g 75 -6.9 -4.44046 | overlap 3628397 3628401 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_3467 3630813 - 3631316 + | IS1 ORF TERM 4515 3631998 - 3632047 + T 72 -6.2 -4.36596 | opp_overlap 3631999 3632001 3632042, overlap 3631999 3632001 3632041 3632042 ATTTTAAAAACAGAA ACATTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAATAA TTTATTCGTTCTGAC TERM 4516 3632046 - 3631999 - T 93 -9.7 -4.55887 | opp_overlap 3631998 3631999 3632001 3632041 3632042, overlap 3632001 3632042 TTTTAAAAACAGAAA CATTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAATA ATTTATTCGTTCTGA TERM 4517 3631999 - 3632046 + T 71 -9.7 -3.21235 | opp_overlap 3631999 3632001 3632042, overlap 3631998 3632001 3632041 3632042 TTTTAAAAACAGAAA CATTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAATA ATTTATTCGTTCTGA TERM 4518 3632001 - 3632044 + T 81 -12.3 -3.15732 | opp_overlap 3631999 3632001 3632042, overlap 3631999 3631998 3632041 3632042 TTAAAAACAGAAACA TTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAA TAATTTATTCGTTCT TERM 4519 3632044 - 3632001 - T 80 -10.1 -3.87576 | opp_overlap 3632001 3631999 3631998 3632041 3632042, overlap 3631999 3632042 TTAAAAACAGAAACA TTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAA TAATTTATTCGTTCT TERM 4520 3632114 - 3632099 - T 100 -11.8 -4.86939 | opp_overlap 3632099 CAACAAATGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC TERM 4521 3632099 - 3632114 + T 95 -11.8 -4.27316 | opp_overlap 3632099 CAACAAATGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC tufA 3633328 - 3632144 - | elongation factor Tu TERM 4522 3633107 - 3633157 + g 74 -2.5 -5.06414 | overlap 3633077 3633109 GTGTGCGTAGTGACG GGTCGGGGTGTCATATTCAACGT GAGAA GTGTTGATGGTGATACCACGAGC TTTTTCTTCCGGCGC TERM 4523 3633373 - 3633348 - R 93 -15.5 -2.78935 | opp_overlap 3633344 3633343 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA fusA 3635513 - 3633399 - | elongation factor G TERM 4524 3635585 - 3635560 - R 82 -11.2 -3.63895 | gap 1, opp_overlap 3635550, overlap 3635550 TTTAAGTAGCCCAAA GCGGGCTGCTT ACTGG AAGC-GCCCGC CTGGTGACTAAAACT rpsG 3636080 - 3635610 - | 30S ribosomal protein S7 rpsL 3636551 - 3636177 - | 30S ribosomal protein S12 TERM 4525 3636621 - 3636599 - R 100 -12.8 -4.7268 | AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG yheL 3636964 - 3636677 - | tRNA 2-thiouridine synthesizing protein B yheM 3637331 - 3636972 - | hypothetical protein yheN 3637717 - 3637331 - | hypothetical protein yheO 3638451 - 3637717 - | hypothetical protein TERM 4526 3638234 - 3638265 + g 76 -7.4 -4.21194 | gap 1 ATCTTCCGGCCTGTA TGTTCA-CCGTTAGC AAT GCGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4527 3638464 - 3638451 - R 78 -6.7 -4.59226 | opp_overlap 3638461 3638462 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTAACTTT TERM 4528 3638523 - 3638535 + r 72 -9.1 -3.54919 | opp_overlap 3638521 3638519 3638523 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 4529 3638562 - 3638605 + r 72 -4.7 -4.61482 | gap 2, opp_overlap 3638574, overlap 3638563 3638574 AATTATATCCGGCCT GTAATAAAAAAACCGCCGCCT GGTC AGGCGGCGG--TTCTTAATGC TTATTTTTTAGCAGA TERM 4530 3638563 - 3638608 + r 76 -4.2 -5.0133 | gap 2, opp_overlap 3638574, overlap 3638562 3638574 ATTATATCCGGCCTG TAA-TA-AAAAAACCGCCGCCT GGTC AGGCGGCGGTTCTTAATGCTTA TTTTTTAGCAGAATC TERM 4531 3638574 - 3638595 + r 100 -17.3 -3.79396 | opp_overlap 3638574, overlap 3638562 3638563 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT TERM 4532 3638595 - 3638574 - R 100 -17.3 -5.7946 | opp_overlap 3638574 3638562 3638563 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT fkpA 3639418 - 3638606 - | FKBP-type peptidyl-prolyl cis-trans isomerase slyX 3639639 - 3639857 + | hypothetical protein TERM 4533 3639858 - 3639896 + T 100 -14.6 -4.29325 | opp_overlap 3639870, overlap 3639870 CCGCCACATTATTGA GGCGTAAAAAAAGCGGGG ATT CCCCGCTTTTTTGTCACC TTTTCGGTATTAGTG TERM 4534 3639870 - 3639884 + T 100 -12.8 -5.28826 | opp_overlap 3639870, overlap 3639858 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT TERM 4535 3639884 - 3639870 - T 100 -12.8 -5.42259 | opp_overlap 3639870 3639858 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT slyD 3640496 - 3639906 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4536 3640470 - 3640481 + g 72 -5.8 -4.39989 | overlap 3640454 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT SSON_3480 3640791 - 3640591 - | hypothetical protein kefB 3642606 - 3640801 - | glutathione-regulated potassium-efflux system protein KefB yheR 3643160 - 3642606 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 4537 3644585 - 3644561 - g 93 -12.9 -3.60798 | overlap 3644557 3644570 AGGGCGATAAAGTAA CCGAAGAAACG CGC CGCTTCTCCGG TGGGGAAAAAGCCCG TERM 4538 3644612 - 3644596 - g 70 -5 -4.56597 | opp_overlap 3644596, overlap 3644570 TCCGGTGGGGAAAAA GCCCGC CTGGT GCTGGC ATTAATTGTCTGGCA yheS 3643288 - 3645201 + | putative ABC transporter ATP-binding protein TERM 4539 3645354 - 3645367 + G 70 -4.5 -4.45083 | TGGCAGCGGCTGGAG TTGCC CGAC GGCGA TTTTGTCGATCTCGC yheT 3645201 - 3646223 + | putative hydrolase TERM 4540 3646355 - 3646331 - g 78 -8.5 -4.20769 | ACACTTGAACAGAAA GTCGCCGACGT CAA ACGCCAGCTAC AGTGCGGAGAAGCGG yheU 3646217 - 3646435 + | hypothetical protein prkB 3646489 - 3647358 + | phosphoribulokinase yhfA 3647817 - 3647413 - | hypothetical protein TERM 4541 3647763 - 3647751 - G 76 -7.7 -4.25104 | TGCCGTCCATTAAAA TCTGG TGA CCAGA GGCGGATTCGCCCAG TERM 4542 3648229 - 3648204 - g 70 -10.5 -2.76171 | overlap 3648201 ACCCATCCAAGAGCA CGCTTATTCAC CAGG GTGAAAAAGCG GAAACGCTGTACTAC crp 3648119 - 3648751 + | cAMP-regulatory protein TERM 4543 3648763 - 3648787 + F 100 -16.5 -4.86731 | overlap 3648753 TTAATCCCGTCGGAG TGGCGCGTTAC CTG GTAGCGCGCCA TTTTGTTTCCCCCGA TERM 4544 3649398 - 3649375 - g 70 -3.6 -4.60041 | overlap 3649376 3649377 ACCGACCCTGAAAAA GCGCTGCCGC CGCT GCTGGTGCGC CAGCAAAAAGCGGTC TERM 4545 3650359 - 3650349 - g 70 -4.6 -4.58395 | opp_overlap 3650349 GTTATTGCGTAAAAA CGCC CAT GACG CTTTAGAAGCCTATC yhfK 3648802 - 3650892 + | hypothetical protein argD 3652179 - 3650959 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein pabA 3652828 - 3652265 - | para-aminobenzoate synthase component II fic 3653462 - 3652860 - | cell filamentation protein Fic TERM 4546 3653157 - 3653171 + g 75 -5.6 -4.70659 | overlap 3653159 CTCCAGATCCTGCAT CAGGGC ATT GCCCTC TTTTTCGATATAAGC TERM 4547 3653159 - 3653169 + g 74 -8.2 -3.96999 | overlap 3653157 CCAGATCCTGCATCA GGGC ATT GCCC TCTTTTTCGATATAA yhfG 3653619 - 3653452 - | hypothetical protein TERM 4548 3653714 - 3653693 - R 100 -17.3 -3.46602 | GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG ppiA 3654296 - 3653724 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4549 3654522 - 3654541 + H 73 -2.1 -5.26119 | overlap 3654523 AAAATCGCCCGCTCG CGGCATA TCCCGC TATGCCA TTTTATTTTTGAACG TERM 4550 3654613 - 3654636 + G 72 -8.8 -3.78934 | GGATTAGCTTTCTCT CCTACGCACT GACT GGTGCGTTGG TTATTGTCACCGGGA TERM 4551 3654951 - 3654968 + G 74 -7.7 -4.015 | gap 1, overlap 3654955 ATGTATGAAGGGCGT CAGCGCGG TTC CCGC-CTG TTATTTACTGACTCC TERM 4552 3655160 - 3655150 - g 85 -6.8 -4.76644 | AACATGCACCAAAAA CGGA TGC TCCG GTAGAGAAAGAAAAG yhfC 3654567 - 3655748 + | hypothetical protein TERM 4553 3655756 - 3655783 + F 93 -10.5 -4.43213 | overlap 3655757 CTCATTAATTGCTAA TGCCGGACGGC ACTATC GTCGTCCGGCC TTTTCCTCTCTTCCC TERM 4554 3655757 - 3655782 + F 86 -14 -3.25205 | overlap 3655756 TCATTAATTGCTAAT GCCGGACGGC ACTATC GTCGTCCGGC CTTTTCCTCTCTTCC TERM 4555 3657822 - 3657799 - g 70 -5.2 -4.3467 | gap 1, opp_overlap 3657807 3657810, overlap 3657785 3657800 ATCTCTACACCAAAA TCACC-GGCTC CCA GCGCCTGGCGA TGTTTGGCGCACAGA nirB 3656010 - 3658553 + | nitrite reductase (NAD(P)H) subunit TERM 4556 3658761 - 3658776 + G 70 -6.1 -4.28774 | opp_overlap 3658772 TGTGGGTCGCCAGCC CGCTG AAAAAA CAGCG TTTTCGCTTAAGTGA TERM 4557 3658785 - 3658772 - g 71 -2.3 -5.00884 | opp_overlap 3658761 3658780 AGCCCGCTGAAAAAA CAGCG TTTT CGCTT AAGTGATGGCTTGTG nirD 3658550 - 3658876 + | nitrite reductase small subunit TERM 4558 3658885 - 3658905 + F 89 -8.9 -4.68994 | overlap 3658886 CGGTTAATGTTTTAA CGGGAGGCG CAA TGCCTCCCC TTTTTGCATGGTCCT TERM 4559 3658886 - 3658904 + F 85 -12.4 -3.40674 | overlap 3658885 GGTTAATGTTTTAAC GGGAGGCG CAA TGCCTCCC CTTTTTGCATGGTCC TERM 4560 3659455 - 3659438 - g 74 -7.7 -4.07568 | opp_overlap 3659438 TCGCGCTGGCTAAAA CCACTGC ACCG GCAATGG TACTGTTCTTCAAAG nirC 3659002 - 3659808 + | nitrite transporter NirC TERM 4561 3660607 - 3660622 + G 82 -9 -4.25104 | ATGAATCTGGTACGC CGCGAT GCTG ATCGCG TTTTCGTCGGCAAAC TERM 4562 3661092 - 3661056 - g 81 -9.3 -4.11484 | opp_overlap 3661068, overlap 3661061 GGCAATTGTCGAAAA CGGAACGGCAGTCACGC AGC GCGTGATTGACGGTACG CTCACGCAACTCGGT TERM 4563 3661087 - 3661061 - g 76 -10.8 -3.36823 | opp_overlap 3661068, overlap 3661056 TTGTCGAAAACGGAA CGGCAGTCACGC AGC GCGTGATTGACG GTACGCTCACGCAAC cysG 3659827 - 3661200 + | siroheme synthase TERM 4564 3661210 - 3661227 + F 86 -11.3 -3.74762 | CATTAATTTAACCCG GGCCAGA GAAT TCTGGCC TTCTTAATGACTCTT TERM 4565 3661303 - 3661265 - f 76 -4 -4.9448 | opp_overlap 3661267, overlap 3661267 ATTCAGCAAATAAAA CATAACCCCTTAATAAAT ATT ATCTGCTAATGGGTTATA TTCACCGTTACAGCG yhfL 3661447 - 3661614 + | hypothetical protein TERM 4566 3661654 - 3661681 + T 93 -10.6 -4.65722 | gap 1, overlap 3661656 CCGGTTTAATTGCCC GACGCCCTCTGGA TTT TCC-GAGGGCGTA TTTGTTTCTATGTCC TERM 4567 3661656 - 3661679 + T 95 -13.2 -3.92887 | gap 1, overlap 3661654 GGTTTAATTGCCCGA CGCCCTCTGGA TTT TCC-GAGGGCG TATTTGTTTCTATGT SSON_3501 3662432 - 3661929 - | IS1 ORF yhfM 3662686 - 3664023 + | putative fructoselysine transporter TERM 4568 3664662 - 3664635 - g 86 -6.3 -5.06816 | gap 1, opp_overlap 3664653 ACCTGGGAAGAAAAA GGCC-GCCAGCT TGGTG AACTGGCCAGCC AGTGGCCGATGATTT frlB 3664023 - 3665066 + | fructoselysine-6-P-deglycase TERM 4569 3665074 - 3665095 + F 90 -12.9 -3.53343 | opp_overlap 3665068, overlap 3665075 AATATTAATCCCTCT CCCGGCCCG GCAA CGGGCCGGA TTTACGCAAGGAGTT TERM 4570 3665075 - 3665094 + F 95 -16.4 -2.71791 | opp_overlap 3665068, overlap 3665074 ATATTAATCCCTCTC CCGGCCCG GCAA CGGGCCGG ATTTACGCAAGGAGT TERM 4571 3665138 - 3665123 - g 76 -7.6 -4.26903 | GTTACCCGATGAAAA CAGGTA TGTT TACCTG CGGCCACCAGCGGCT yhfP 3665116 - 3665826 + | hypothetical protein yhfQ 3665944 - 3666729 + | fructoselysine 6-kinase TERM 4572 3666736 - 3666763 + F 79 -12.8 -2.80699 | gap 1, opp_overlap 3666736, overlap 3666733 3666731 GCCTGGTAGGTATAA CGTTGGCGT-GAG CAT CTCCGCGCCAACG TGCTGTTACTTGCCG TERM 4573 3666763 - 3666736 - f 77 -10.6 -3.35679 | gap 1, opp_overlap 3666733 3666731 3666736 GCCTGGTAGGTATAA CGTTGGCG-TGAG CAT CTCCGCGCCAACG TGCTGTTACTTGCCG yhfR 3666763 - 3667560 + | DNA-binding transcriptional regulator FrlR TERM 4574 3667573 - 3667615 + T 100 -14.9 -4.1899 | opp_overlap 3667557 3667562 3667561 3667576 3667578 3667579, overlap 3667578 TAACCGTAGGCCGGA TAAGATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTTGAA TTTTACATCCCGTAC TERM 4575 3667612 - 3667576 - T 100 -16.6 -3.30124 | opp_overlap 3667573 3667578, overlap 3667562 3667561 3667578 3667579 CCGTAGGCCGGATAA GATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTT GAATTTTACATCCCG TERM 4576 3667610 - 3667578 - T 100 -19.2 -3.21924 | opp_overlap 3667573 3667578, overlap 3667562 3667561 3667576 3667579 GTAGGCCGGATAAGA TGCGCCAGCATCGC ATCCG GCGATGCTGGCGCG TTGAATTTTACATCC TERM 4577 3667578 - 3667610 + T 100 -21.4 -3.38281 | opp_overlap 3667562 3667561 3667578 3667576 3667579, overlap 3667573 GTAGGCCGGATAAGA TGCGCCAGCATCGC ATCCG GCGATGCTGGCGCG TTGAATTTTACATCC TERM 4578 3667609 - 3667579 - T 100 -22.7 -2.5294 | opp_overlap 3667578 3667573, overlap 3667562 3667561 3667578 3667576 TAGGCCGGATAAGAT GCGCCAGCATCGC ATCCG GCGATGCTGGCGC GTTGAATTTTACATC yhfS 3668797 - 3667712 - | hypothetical protein yhfT 3670113 - 3668809 - | putative transport system permease protein yhfU 3670517 - 3670125 - | hypothetical protein yhfV 3671367 - 3670489 - | putative hydrolase TERM 4579 3673718 - 3673732 + r 76 -9.2 -3.72984 | opp_overlap 3673717, overlap 3673730 TGCGGCGGAAATCAG CGCCGG GTT CTGGCG TTTCAATGCTTCTAC TERM 4580 3673777 - 3673791 + r 82 -2.9 -5.54264 | opp_overlap 3673786, overlap 3673781 3673786 CTCGTTTCTGTTCCT TGAAT TAAAT ATTCA TTTTTTTGAATATTT yhfY 3674241 - 3673837 - | hypothetical protein yhfZ 3674902 - 3674216 - | hypothetical protein TERM 4581 3675072 - 3675097 + r 75 -3.1 -5.14965 | overlap 3675075 3675076 CCCAACAAATAACGG GCCAGCGTCGT GATG ACGACGCCTTC TTTTTTGATAAACGT TERM 4582 3675075 - 3675094 + r 82 -7.8 -4.67552 | overlap 3675072 3675076 AACAAATAACGGGCC AGCGTCGT GATG ACGACGCC TTCTTTTTTGATAAA TERM 4583 3675076 - 3675093 + r 79 -11.3 -3.39447 | overlap 3675075 3675072 ACAAATAACGGGCCA GCGTCGT GATG ACGACGC CTTCTTTTTTGATAA TERM 4584 3675260 - 3675247 - R 100 -9.5 -5.67967 | opp_overlap 3675247 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG TERM 4585 3675247 - 3675260 + r 93 -9.5 -4.67904 | opp_overlap 3675247 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG trpS 3676285 - 3675281 - | tryptophanyl-tRNA synthetase TERM 4586 3675377 - 3675424 + g 95 -15.9 -3.06183 | gap 1, overlap 3675359 3675386 GTCTTTCATCACCTG TTGCAGGAAGGCT-TCATCGTT GCGGA AACGGTGATAGCGTTCCTGCAA TTCAGTCAGCATACC gph 3677036 - 3676278 - | phosphoglycolate phosphatase rpe 3677706 - 3677029 - | ribulose-phosphate 3-epimerase TERM 4587 3677711 - 3677723 + r 78 -6.3 -4.61482 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTTTCGCGGG dam 3678560 - 3677724 - | DNA adenine methylase TERM 4588 3678251 - 3678231 - G 82 -3.1 -5.19879 | overlap 3678233 3678236 GTTCAAATATAAAAA CAGTACCGC CCG ACGGAACGG ATCCTGGCTTTTGTT TERM 4589 3678444 - 3678423 - G 100 -13.1 -4.60073 | overlap 3678438 GATATAACGAGAAAA GTCGGTGTT GAGA AACACCGAC CCGGCACCTACAAAA damX 3679953 - 3678667 - | hypothetical protein TERM 4590 3680029 - 3680011 - R 77 -11 -3.15621 | opp_overlap 3680008, overlap 3680009 AACCTGAAGCTAATA GACCGCTT GAT AAGCGGCC TGACCTTTCTTGTTG aroB 3681133 - 3680045 - | 3-dehydroquinate synthase aroK 3681711 - 3681190 - | shikimate kinase I TERM 4591 3681499 - 3681517 + g 72 -4.5 -4.64676 | AATACCCTGTTTCTC GGTCAAC TCATT GATGACC TTTTCTTCGCGATCG TERM 4592 3681775 - 3681749 - R 83 -10 -4.05446 | TTCGTTAATGATAAA CCCGCTTCGCTC AGA GAGCGCCGCAGG ACATGAACTGAAACC TERM 4593 3681970 - 3681954 - R 83 -6.5 -5.06451 | GATTAGCGTAAAAAA GACAGCA AAA TGCCGCC TGAATGATAAATCAT hofQ 3683350 - 3682112 - | outer membrane porin HofQ TERM 4594 3682278 - 3682264 - GR 75 -5.6 -4.59773 | TTTTACGGGTAAAAA TGCCGC CCA GCGCCA ACGTTTCTCCGCTTT TERM 4595 3682853 - 3682900 + gr 72 -7.8 -3.87075 | gap 1 TACCCACTGTTCAAG CGCGCTTAACGCCGTTTTGTTAT CTC GTAGCAAAA-GGCGATTGGTGCG TTTATCGACGGTCAT yrfA 3683705 - 3683262 - | hypothetical protein yrfB 3684096 - 3683656 - | hypothetical protein TERM 4596 3683857 - 3683835 - GR 72 -8.4 -3.74872 | overlap 3683836 ATGGATGCCAGGAAA CCAGTTGCGC GCC GGGCAACTGA AAATCCAGTGGCGAA yrfD 3685425 - 3684619 - | hypothetical protein TERM 4597 3685418 - 3685434 + g 78 -12.3 -2.92091 | ATGATCTCCTTATCA CCCGTCA CTC TGACGGG TATATCAATGCGTCT mrcA 3685494 - 3688070 + | peptidoglycan synthetase TERM 4598 3688078 - 3688091 + T 87 -9.5 -4.28774 | opp_overlap 3688078, overlap 3688087 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA TERM 4599 3688091 - 3688078 - T 93 -9.5 -4.72272 | opp_overlap 3688078 3688087 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA nudE 3688795 - 3688235 - | ADP-ribose diphosphatase NudE yrfF 3689115 - 3691250 + | putative dehydrogenase TERM 4600 3691292 - 3691251 - f 79 -9.5 -3.67775 | gap 1, opp_overlap 3691255, overlap 3691254 AGCCTTATCGAATAA CACGTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT-TG CTTCACTCTGGAGAT TERM 4601 3691290 - 3691254 - f 78 -12.3 -2.64872 | opp_overlap 3691255, overlap 3691251 CTTATCGAATAACAC GTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT TGCTTCACTCTGGAG TERM 4602 3691255 - 3691289 + F 100 -18 -3.39142 | opp_overlap 3691254 3691251 TTATCGAATAACACG TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA yrfG 3691270 - 3691983 + | putative phosphatase TERM 4603 3692039 - 3692049 + G 75 -4.6 -4.82901 | CTGGATAAATGGCTA TGGG CTG CCCG TTTTTATAAAACCCG yrfH 3691994 - 3692395 + | ribosome-associated heat shock protein Hsp15 TERM 4604 3692747 - 3692722 - g 93 -10.4 -4.44974 | opp_overlap 3692721 CGAAATTCCAGAAAA TGCCGACCTG AAAACG CTGGTCGGCA ATGGTTACGTGGTGA hslO 3692420 - 3693298 + | Hsp33-like chaperonin TERM 4605 3693307 - 3693330 + F 100 -16.8 -4.10161 | opp_overlap 3693302 3693318 TCATTAATGAGTATG TCCGGCAGAG AGGG CTCTGCCGGA TTTTACGACGTAATG TERM 4606 3693667 - 3693678 + F 74 -5.8 -4.66163 | ATCTTGCTCGACCAG GACG CAGG CGTC TTTTTCAATACAGGT TERM 4607 3695375 - 3695396 + F 75 -3 -5.26918 | overlap 3695376 CGATAATAGCAACCG TTTCGTGA CAGGAA TCACGGAG TTTTTTGTCAAATAT TERM 4608 3695845 - 3695831 - g 73 -11.4 -2.77043 | opp_overlap 3695829, overlap 3695830 GGCAGCATCTGAAAG GCCTGG TGA CCAGGC AGCTTTCCGGCAAAC TERM 4609 3697105 - 3697086 - g 73 -11.4 -2.59797 | overlap 3697085 3697083 CTTCGATAAATACAC CGACACCC CTGC GGGTGCCG CGCTGGTAGCGGCTG pckA 3695512 - 3697134 + | phosphoenolpyruvate carboxykinase TERM 4610 3697204 - 3697183 - T 100 -13.7 -4.65153 | opp_overlap 3697183 TTATAGAAAGCAAAA CGGGAGGCA CCTT CGCCTCCCG TTTATTTACCCTTCT TERM 4611 3697183 - 3697204 + T 100 -13 -4.46835 | opp_overlap 3697183 TTATAGAAAGCAAAA CGGGAGGC ACCTTC GCCTCCCG TTTATTTACCCTTCT envZ 3698562 - 3697210 - | osmolarity sensor protein TERM 4612 3698507 - 3698475 - G 73 -12 -2.73443 | overlap 3698474 GCACCACCAGATAAG TCGTCACCAGGCTG GCGAA CAGCAAGGTGACGA TGAGCAATAACGTAC ompR 3699278 - 3698559 - | osmolarity response regulator TERM 4613 3698798 - 3698784 - G 77 -10 -3.62096 | opp_overlap 3698790 3698795, overlap 3698788 CTTCAGTACCGCAAA CTCACC GCT GGTGAG CGGCATCGGCTCATC greB 3699506 - 3699982 + | transcription elongation factor GreB TERM 4614 3701972 - 3701951 - g 84 -7.9 -4.62904 | gap 1, opp_overlap 3701950 3701949, overlap 3701952 AAAGAGCTGGAAAAA CCGGGTCGCG ATC CGCGTCC-GG AATTTAAAACCGCTC yhgF 3700178 - 3702400 + | hypothetical protein TERM 4615 3702501 - 3702480 - f 95 -10.9 -4.52589 | gap 1, opp_overlap 3702481 3702482, overlap 3702481 3702482 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGC-C TTTTTATTCCACAAC TERM 4616 3702501 - 3702481 - f 79 -11.1 -3.31232 | opp_overlap 3702481 3702482, overlap 3702480 3702482 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAC TERM 4617 3702481 - 3702501 + F 100 -11.1 -5.06414 | opp_overlap 3702480 3702481 3702482, overlap 3702482 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAC TERM 4618 3702500 - 3702482 - f 86 -14.6 -2.58418 | opp_overlap 3702481 3702482, overlap 3702480 3702481 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA TERM 4619 3702482 - 3702500 + F 95 -14.6 -3.63367 | opp_overlap 3702482 3702480 3702481, overlap 3702481 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA feoA 3702838 - 3703065 + | ferrous iron transport protein A TERM 4620 3703929 - 3703940 + G 74 -5.8 -4.53036 | TGCTCAACCGTTTCC TCGG TCTG CCGA TTTTCCTCTTTGTGA TERM 4621 3704712 - 3704694 - g 77 -8.2 -4.11216 | overlap 3704707 CGTTGAGCGGGAAAA TCGTCGAT AAC ATCAACGA CTCGGCGCTGGCGTC feoB 3703082 - 3705403 + | ferrous iron transport protein B yhgG 3705403 - 3705639 + | hypothetical protein TERM 4622 3705666 - 3705690 + T 100 -12.2 -5.08824 | gap 1, opp_overlap 3705666 CGCCTGTTTTGGAAA GCCCGGTATGC GTCT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4623 3705690 - 3705666 - T 88 -12.2 -3.53012 | gap 1, opp_overlap 3705666 CGCCTGTTTTGGAAA GCCCGGTATGC GTCT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4624 3705730 - 3705718 - T 80 -6.3 -4.82901 | opp_overlap 3705725 GGCTTTCCATAAAAA TGCAA CTC TTGCA GCACGGCGTAAGTTC TERM 4625 3705906 - 3705918 + T 71 -3.3 -4.75309 | overlap 3705907 TTTTACGCCAACCGG ACACG GCT CGTGA TTTTCTTGCGTTTCA SSON_3543 3706924 - 3706421 - | IS1 ORF TERM 4626 3707485 - 3707511 + r 71 -10.8 -2.74322 | overlap 3707477 3707484 AGAAGAGTTGGCTGC GGCGAGCCAGTA AAT TTCTGTCTCGCC ATTTCAAAAGTTGCC bioH 3708296 - 3707526 - | carboxylesterase BioH TERM 4627 3707599 - 3707586 - G 70 -5.2 -4.44046 | opp_overlap 3707586 CGGATGCGAAATAAA CGGC GCATGG GCCG CTTTGGCGAAGATAT yhgH 3708334 - 3709017 + | gluconate periplasmic binding protein yhgI 3709076 - 3709651 + | putative DNA uptake protein gntT 3710012 - 3711328 + | high-affinity transport permease for gluconate TERM 4628 3711367 - 3711332 - T 73 -9.8 -3.32963 | gap 1, overlap 3711334 3711335 ATGGTGATTTGATAA CACTGACTGCCGGATGC ATC GCATCCGGCA-TCAACC GCACTCTACTTCTTC TERM 4629 3711365 - 3711334 - T 90 -14.6 -3.23393 | gap 1, overlap 3711332 3711335 GGTGATTTGATAACA CTGACTGCCGGATGC ATC GCATCCGGCA-TCAA CCGCACTCTACTTCT TERM 4630 3711364 - 3711335 - T 90 -15.9 -2.53822 | gap 1, overlap 3711334 3711332 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGGCA-TCA ACCGCACTCTACTTC malQ 3713457 - 3711373 - | 4-alpha-glucanotransferase TERM 4631 3711472 - 3711484 + g 74 -3.3 -4.93296 | opp_overlap 3711451 3711450 3711448 3711472, overlap 3711449 AAGCGTTGCGGAAAG CTTGC GTC GCCAG TTTTTATACTGGTAA TERM 4632 3712410 - 3712396 - G 74 -10 -3.56092 | overlap 3712397 CCAGCAGGCGGCAAA CTGGCT GTA AGCCAG CCACTGCAACCAGAG TERM 4633 3713302 - 3713328 + g 85 -13.1 -3.18582 | gap 1, overlap 3713299 3713298 3713319 3713320 GACATTCGGGACTGG CGTTACCGCCAC TTTC GTGGCGGTA-CG TTGATGCATCGCGTC malP 3715860 - 3713467 - | maltodextrin phosphorylase TERM 4634 3714377 - 3714393 + g 70 -3.7 -4.62872 | TATTGCTGACGGAAT TTCGC ATCATCA GCGAA TTTTTCCAGATTGAT TERM 4635 3714466 - 3714483 + g 79 -9.9 -3.72576 | ATCCAACAGAGCCGC CAGTGCA GGGT TGCACTG TTTGATCCAGCGACG TERM 4636 3715044 - 3715060 + g 72 -5.1 -4.57073 | opp_overlap 3715042, overlap 3715042 CACACTGGAAGTACT GCTGC ATCAAGC GCAGC TTTTTACCGGCAGTA TERM 4637 3716283 - 3716300 + H 72 -6.3 -4.21676 | gap 1, overlap 3716283 3716285 AGGGAAACCAGTATT C-ACGCTG GAT CAGCGTCG TTTTAGGTGAGTTGT TERM 4638 3716780 - 3716768 - g 72 -5.5 -4.58663 | overlap 3716769 ACGATGGCGCAAAAA CGGCA ATA TGCCA GCCTGACGTCACTCT malT 3716471 - 3719176 + | transcriptional regulator MalT yhgKJ 3720238 - 3719219 - | RNA 3'-terminal-phosphate cyclase rtcB 3721465 - 3720239 - | hypothetical protein TERM 4639 3721368 - 3721355 - G 77 -5.9 -4.65263 | opp_overlap 3721353 3721355 ATGTTTGAAAATAAA CGGCA TCTT CGCCG TATTAATAAGTTGCT SSON_3553 3722007 - 3721504 - | IS1 ORF TERM 4640 3722280 - 3722302 + H 83 -13.5 -3.12351 | opp_overlap 3722283, overlap 3722283 GGCTAAATCCTTCAA GAAGCCAGC CATTC GCTGGCTTC TTGCCTCTCAGGAAA TERM 4641 3722299 - 3722283 - H 72 -9.4 -3.64283 | opp_overlap 3722280 3722283 TAAATCCTTCAAGAA GCCAGC CATTC GCTGGC TTCTTGCCTCTCAGG TERM 4642 3722283 - 3722299 + H 76 -9.4 -3.70773 | opp_overlap 3722283, overlap 3722280 TAAATCCTTCAAGAA GCCAGC CATTC GCTGGC TTCTTGCCTCTCAGG TERM 4643 3723240 - 3723260 + GH 72 -8.2 -3.66654 | AGGTGTTATTCCTTG CGGCGGGG ATCAC CCTTGCCG TTTCACCTTCCCATG yidY 3722402 - 3723577 + | multidrug efflux system protein MdtL yidZ 3723552 - 3724511 + | DNA-binding transcriptional regulator YidZ yieE 3724656 - 3725417 + | hypothetical protein TERM 4644 3725815 - 3725825 + T 74 -6.8 -4.2828 | TCAGTATCACCTGCG CCAG ATT CTGG TTTTCCTCGATGCAA TERM 4645 3725998 - 3726022 + T 88 -8.6 -4.74132 | gap 1, opp_overlap 3725998, overlap 3726016 GATCTAAATAAAAAA CCCGCCA-GTA ATCA TGCATGGCGGG TTTTTAATGCGCTAT TERM 4646 3726022 - 3725998 - T 93 -6.4 -5.65927 | gap 1, opp_overlap 3725998 3726016 GATCTAAATAAAAAA CCCGCCA-GTA ATCA TGCATGGCGGG TTTTTAATGCGCTAT yieG 3727380 - 3726043 - | putative membrane/transport protein yieH 3727546 - 3728211 + | 6-phosphogluconate phosphatase TERM 4647 3728392 - 3728380 - g 74 -7.7 -4.08394 | opp_overlap 3728380 ATATTCTTCGCAAAA GAACC GCT GGTTC TTTTGGTAATAATAC TERM 4648 3728380 - 3728392 + G 78 -7.7 -4.32034 | opp_overlap 3728380 ATATTCTTCGCAAAA GAACC GCT GGTTC TTTTGGTAATAATAC yieI 3728278 - 3728751 + | putative inner membrane protein SSON_3561 3729052 - 3729555 + | IS1 ORF TERM 4649 3729958 - 3729931 - T 72 -6.3 -4.2204 | gap 1, opp_overlap 3729931 3729929 AAGCTGAAGAAATAA GGCCGGA-TGTA TGAAT TACGCTCCGGCC TGTTCTCATTATTTA SSON_3563 3730871 - 3730368 - | IS1 ORF TERM 4650 3732510 - 3732539 + r 89 -9.3 -4.59109 | opp_overlap 3732511 3732512, overlap 3732512 CACCACTAAGGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 4651 3732538 - 3732511 - R 81 -12.8 -3.29364 | opp_overlap 3732510 3732512, overlap 3732512 ACCACTAAGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 4652 3732512 - 3732537 + r 100 -16.3 -3.90762 | opp_overlap 3732511 3732512, overlap 3732510 CCACTAAGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 4653 3732537 - 3732512 - R 90 -16.3 -2.57136 | opp_overlap 3732512 3732510, overlap 3732511 CCACTAAGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_3565 3733159 - 3732521 - | IS4 orf SSON_3566 3733866 - 3733156 - | IS4 orf TERM 4654 3733881 - 3733856 - G 100 -9.8 -5.61596 | opp_overlap 3733856 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 4655 3733856 - 3733881 + g 73 -9.1 -3.61398 | opp_overlap 3733856 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 4656 3733949 - 3733992 + r 82 -11.2 -3.51329 | opp_overlap 3733952, overlap 3733930 3733952 TCCTCCTGAAGAGGA TAATTTTACAGCCAGCAG GAAGTTAG CGGCTGGCTGTAAAAATA TTATGGTTCGCCGTA TERM 4657 3733989 - 3733952 - R 90 -12.9 -3.52073 | opp_overlap 3733949 3733952 TCCTGAAGAGGATAA TTTTACAGCCAGCAG GAAGTTAG CGGCTGGCTGTAAAA ATATTATGGTTCGCC TERM 4658 3733952 - 3733989 + r 81 -12.9 -2.59447 | opp_overlap 3733952, overlap 3733949 TCCTGAAGAGGATAA TTTTACAGCCAGCAG GAAGTTAG CGGCTGGCTGTAAAA ATATTATGGTTCGCC treF 3735642 - 3733993 - | trehalase TERM 4659 3734035 - 3734021 - G 74 -7.8 -4.06001 | opp_overlap 3734021, overlap 3733996 3733993 TACAAACCAATTAAA CGGCGT ACC ACACCG TTAGTCCAGCCAAAC TERM 4660 3736925 - 3736902 - g 70 -3.8 -4.62471 | gap 1, opp_overlap 3736918, overlap 3736905 3736918 GCTAAGCTGGAAAAA GATCCGCAGCT TAA AGC-GCAGTTC CTCGGCGTCTATCCG TERM 4661 3737059 - 3737045 - g 75 -7.1 -4.34402 | GCGTGGAGATGAAAA TGCGC TGACG GCGCA ACAGAAAAAAGGCTA yhjA 3736047 - 3737444 + | putative cytochrome C peroxidase TERM 4662 3737454 - 3737479 + F 100 -14.1 -5.08601 | opp_overlap 3737450 CAATAATTAATTTGA TCGCCCGAACA GGAA TGTTTGGGCGA TTTTTATTACGATAA gadA 3737655 - 3739055 + | glutamate decarboxylase isozyme TERM 4663 3739071 - 3739117 + F 86 -10.9 -3.72324 | opp_overlap 3739075, overlap 3739075 TAACATAACGTTGTA AAAACCGAATGCCCAGCCTTT AAAAA AACAGCTGGGCATTCGGTTGC TTATTAATCGCAATA TERM 4664 3739075 - 3739113 + F 100 -16.1 -3.56142 | opp_overlap 3739075, overlap 3739071 ATAACGTTGTAAAAA CCGAATGCCCAGCCTTT AAAAA AACAGCTGGGCATTCGG TTGCTTATTAATCGC TERM 4665 3739113 - 3739075 - f 100 -18.3 -4.60255 | opp_overlap 3739071 3739075 ATAACGTTGTAAAAA CCGAATGCCCAGCCTTT AAAAA AACAGCTGGGCATTCGG TTGCTTATTAATCGC yhiX 3739425 - 3740249 + | DNA-binding transcriptional regulator GadX TERM 4666 3740292 - 3740274 - f 100 -5.2 -6.06529 | CAGACATAAAAAAAA CCCGGC ATAGGGG ACCGGG AAGAGGATAGTCTGC TERM 4667 3740517 - 3740532 + F 72 -3.2 -5.08824 | opp_overlap 3740510 3740509 GGATAAATTTTGGTC CTACCA AATC TGGCAG TTTTTTCGCTAAGAA yhiW 3740617 - 3741345 + | putative ARAC-type regulatory protein TERM 4668 3741417 - 3741430 + T 70 -9.5 -2.99057 | overlap 3741415 TCCCTGATGATTTCT GCCGG GCTA CCGGC TAGTTCTCTTTCGCA TERM 4669 3741696 - 3741663 - T 100 -14.8 -3.78953 | opp_overlap 3741660 3741663 3741665 ATGGTTAGCAGGAAA GAGTAAGGCTGAAC CTTCAC GTTCAACCTTACTC TCATTTACACGTTAC TERM 4670 3741663 - 3741696 + T 79 -12.6 -2.92667 | opp_overlap 3741663, overlap 3741660 3741665 ATGGTTAGCAGGAAA GAGTAAGGCTGAAC CTTCAC GTTCAACCTTACTC TCATTTACACGTTAC yhiV 3744821 - 3741708 - | putative transport system permease protein yhiU 3746003 - 3744846 - | multidrug resistance efflux protein MdtE TERM 4671 3745650 - 3745688 + g 71 -9.6 -3.56594 | gap 1, overlap 3745674 3745675 GTTAAAGGTGATGCG GGCATTGCTGGCGGTAG AGAGCG CTTTCGCCAGCGA-GCC TTTGGCGGAGTTTAG TERM 4672 3746179 - 3746161 - R 95 -3.1 -6.02345 | overlap 3746162 CAACGACAAAAAAAA TGTTGCC GTTCT GCCAACA GTTCCTGCCAGCATT yhiE 3746869 - 3746342 - | hypothetical protein TERM 4673 3747242 - 3747222 - R 85 -14.1 -3.05384 | opp_overlap 3747222 CTTGTTTCGACTTAA GCTGGCAAT TGG ATTGCCAGC TTTCTTTTAACGCAT TERM 4674 3747222 - 3747242 + r 100 -14.1 -4.65263 | opp_overlap 3747222 CTTGTTTCGACTTAA GCTGGCAAT TGG ATTGCCAGC TTTCTTTTAACGCAT TERM 4675 3747651 - 3747617 - R 79 -11.6 -3.26545 | opp_overlap 3747627 3747644 3747647, overlap 3747618 CGGAGAGAGTATTAA TCGGATCATAGTCA TATCAAG TGACTATGATCCGG GTGACAACCGGGATA TERM 4676 3747650 - 3747618 - R 90 -15.1 -2.55606 | opp_overlap 3747627 3747644 3747647, overlap 3747617 GGAGAGAGTATTAAT CGGATCATAGTCA TATCAAG TGACTATGATCCG GGTGACAACCGGGAT hdeD 3748240 - 3747668 - | acid-resistance membrane protein TERM 4677 3748645 - 3748658 + G 72 -6.7 -4.25283 | GACGAATCCTTCCAG CCAAC TGCA GTTGG TTTTGCTGAAGCGCT hdeA 3748495 - 3748827 + | acid-resistance protein TERM 4678 3748864 - 3748911 + F 73 -10.8 -3.00259 | gap 1, opp_overlap 3748868, overlap 3748868 TACTTCCTTGCATAT TGAACAGGCCGGAATATCTTCTT TAA AAGCAGCTATTCCT-CCTGTTCA TATATAATCTCTATA hdeB 3748931 - 3749269 + | acid-resistance protein TERM 4679 3749287 - 3749317 + F 100 -14.8 -4.93595 | opp_overlap 3749287 AGGTACAAGTAAAAA GGAGTAGCAAGTTG AGC CATCTTGCTGCTCC TTTTTGCATTTTTAT TERM 4680 3749317 - 3749287 - f 100 -12.6 -4.93968 | opp_overlap 3749287 AGGTACAAGTAAAAA GGAGTAGCAAGTTG AGC CATCTTGCTGCTCC TTTTTGCATTTTTAT yhiD 3749333 - 3749980 + | putative Mg(2+) transport ATPase yhiF 3750552 - 3750022 - | hypothetical protein TERM 4681 3750697 - 3750667 - R 80 -12.7 -3.10522 | opp_overlap 3750668 3750693, overlap 3750670 ATTTTATGTAATACA TGATGCAGATGCT GAGAA AGCATCTGCATCT TTCGGTGGTGTTATT TERM 4682 3750668 - 3750696 + r 100 -16.2 -3.72009 | opp_overlap 3750667 3750670, overlap 3750693 TTTTATGTAATACAT GATGCAGATGCT GAGAA AGCATCTGCATC TTTCGGTGGTGTTAT TERM 4683 3750694 - 3750670 - R 82 -13 -2.76322 | opp_overlap 3750668 3750693, overlap 3750667 TTATGTAATACATGA TGCAGATGCT GAGAA AGCATCTGCA TCTTTCGGTGGTGTT slp 3751307 - 3750708 - | outer membrane protein induced after carbon starvation TERM 4684 3750791 - 3750757 - G 74 -10.6 -3.14564 | GCATTGGTGTAGTAA GGCGCACCCCAGCCCG GTT CCGGCCAGAATGCACC ATAGCCGTAATCCCA SSON_3581 3751714 - 3752217 + | IS1 ORF yhiS 3753521 - 3752676 - | hypothetical protein TERM 4685 3752836 - 3752826 - G 78 -5.4 -4.87133 | overlap 3752835 ATCTTCGAAATAAAA CCTT GAC AAGG TTAGAACGAACCCGG SSON_3583 3754711 - 3753806 - | insertion element IS2 transposase InsD SSON_3584 3755034 - 3754669 - | insertion sequence 2 OrfA protein SSON_3585 3755983 - 3755270 - | IS600 ORF2 SSON_3586 3756426 - 3756124 - | IS600 ORF1 TERM 4686 3756494 - 3756522 + r 74 -11.1 -2.77503 | overlap 3756490 3756521 CAGGCTACCTCACAT TGCTTCTCCGATA AAA TGTCAGAGAAGCA TGATTACGTGGTTAT SSON_3587 3757366 - 3756689 - | hypothetical protein SSON_3588 3758287 - 3757490 - | IS21 ORF2 SSON_3589 3759459 - 3758338 - | IS21 ORF1 TERM 4687 3758617 - 3758637 + g 77 -9.7 -3.59979 | overlap 3758613 3758621 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 4688 3758621 - 3758633 + g 75 -6.9 -4.44046 | overlap 3758613 3758617 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_3590 3760008 - 3759541 - | IS2 ORF2 SSON_3591 3760397 - 3760032 - | insertion sequence 2 OrfA protein SSON_3592 3760645 - 3760971 + | IS629 ORF1 TERM 4689 3761287 - 3761275 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SSON_3593 3761186 - 3761452 + | IS629 ORF2 TERM 4690 3761618 - 3761603 - g 75 -5.4 -4.67123 | CTAAAAGAAGCAAAA CTGCTG GCAT CAACAG GGAGTACTGGTGACT SSON_3594 3761468 - 3761854 + | IS629 ORF2 TERM 4691 3761962 - 3761976 + F 73 -4.3 -4.75518 | overlap 3761938 3761937 ACGTCGGGTTATCAT TAGCT TCTTC AGCTA TTTTACTTTTATATC SSON_3596 3762673 - 3762975 + | IS600 ORF1 SSON_3597 3763116 - 3763829 + | IS600 ORF2 SSON_3598 3764754 - 3763870 - | putative transposase TERM 4692 3765696 - 3765672 - g 75 -5.2 -4.68607 | gap 1, opp_overlap 3765679 CACAAAAAACATAAA GATGAAAGAAA CTTA TTTCTT-CATC CTCAACTCGTCATCA shiE 3765345 - 3765848 + | hypothetical protein imm 3767414 - 3766221 - | putative membrane transport protein TERM 4693 3767472 - 3767523 + H 86 -9.2 -4.39166 | gap 1, opp_overlap 3767464 3767475 3767478, overlap 3767475 3767485 AATTAATTTATCTGA CAATAACATTTATTGTTGATAATGA GAA TCATTATCGAC-ATAATTGTTATTA TTTTACTGTGTGGGA TERM 4694 3767475 - 3767520 + H 91 -10.9 -4.30909 | gap 1, opp_overlap 3767464 3767475 3767478, overlap 3767472 3767485 TAATTTATCTGACAA TAACATTTATTGTTGATAATGA GAA TCATTATCGAC-ATAATTGTTA TTATTTTACTGTGTG TERM 4695 3767485 - 3767511 + H 78 -11.8 -3.08006 | opp_overlap 3767464 3767478 3767475, overlap 3767475 3767472 GACAATAACATTTAT TGTTGATAATGA GAA TCATTATCGACA TAATTGTTATTATTT TERM 4696 3767590 - 3767571 - g 82 -7.8 -4.56597 | overlap 3767572 CTGCCCTCTGAAAAA CCAGCCAC AGAT GTGGCTGC GCAGTGCTTCCTGAA TERM 4697 3767589 - 3767572 - g 80 -11.3 -3.33744 | overlap 3767571 TGCCCTCTGAAAAAC CAGCCAC AGAT GTGGCTG CGCAGTGCTTCCTGA TERM 4698 3767683 - 3767662 - g 81 -13.1 -2.5547 | overlap 3767648 3767661 ACCCGCCAGACGAAT TGCTCATCC CGCT GGATGAGCA GAAATCGCTCCATTT TERM 4699 3768075 - 3768086 + G 70 -5.8 -4.19817 | overlap 3768064 ATGGCACCCCACTTC CCAC TGCG GTGG TTTTCGGTGGATAAA iucA 3767550 - 3769274 + | siderophore biosynthesis protein TERM 4700 3770178 - 3770198 + G 85 -11.9 -3.61715 | AAGCGCTCGCGCATG GTGATGGCG GAT CGTCATCAC TTCTTCACGGAGGTC iucB 3769275 - 3770222 + | siderophore biosynthesis protein TERM 4701 3771799 - 3771809 + G 70 -4.6 -4.4727 | overlap 3771794 TCCACAAATGGCAGA GCGT TTT GCGC TTTTCTCACTCTTCA iucC 3770222 - 3771964 + | siderophore biosynthesis protein TERM 4702 3772062 - 3772076 + G 71 -2.8 -4.7373 | GAACTGTCTCTTCTT TGACGA ACA TCCTCA TTTTTCCTGGCATCC TERM 4703 3773263 - 3773245 - g 81 -4.4 -5.03314 | opp_overlap 3773247 3773254, overlap 3773246 3773247 GGCAGCCGGAAAAAA CCGCAGCC GGA GGCTGCTT CTTTAACTCACTATA TERM 4704 3773261 - 3773247 - g 73 -11.4 -2.76422 | opp_overlap 3773247 3773254, overlap 3773246 3773245 CAGCCGGAAAAAACC GCAGCC GGA GGCTGC TTCTTTAACTCACTA TERM 4705 3773247 - 3773261 + G 90 -11.4 -3.9693 | opp_overlap 3773247 3773246 3773245, overlap 3773254 CAGCCGGAAAAAACC GCAGCC GGA GGCTGC TTCTTTAACTCACTA iucD 3771961 - 3773298 + | lysine:N6-hydroxylase iutA 3773301 - 3775499 + | putative ferric siderophore receptor TERM 4706 3775523 - 3775570 + F 82 -12.9 -2.8547 | opp_overlap 3775534 3775537, overlap 3775534 3775537 CTTTTGCAACAAGGG TATGCTGTAAACAACATGGTC CTTGGT GGCCATGTTGTTTACAGCCAG TATAATATACAGCCT TERM 4707 3775534 - 3775559 + F 75 -9.8 -3.54129 | opp_overlap 3775534 3775537, overlap 3775523 3775537 AGGGTATGCTGTAAA CAACATGGTC CTTGGT GGCCATGTTG TTTACAGCCAGTATA SSON_3606 3776681 - 3777184 + | IS1 ORF TERM 4708 3777545 - 3777572 + T 100 -18.6 -3.06133 | opp_overlap 3777538 3777535 AAATATCATTCATCA TGACCGGCGTTT ATAC AAACGCCGGTCA TTCGCTAACAGCTTC SSON_3607 3778650 - 3777811 - | IS911 ORF2 TERM 4709 3778571 - 3778591 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG SSON_3609 3780143 - 3779250 - | IS150 ORF B SSON_3608 3780110 - 3780385 + | IS629 ORF1 SSON_3610 3780582 - 3780869 + | IS629 ORF2 TERM 4710 3781035 - 3781020 - g 75 -5.4 -4.67123 | CTAAAAGAAGCAAAA CTGCTG GCAT CAACAG GGAGTACAGGCGACT SSON_3611 3780885 - 3781091 + | IS629 ORF2 SSON_3612 3781609 - 3781106 - | IS1 ORF nlpA 3782621 - 3781854 - | lipoprotein-28 SSON_3614 3782843 - 3783136 + | putative transport protein yicM 3784357 - 3783260 - | putative transport protein TERM 4711 3783936 - 3783901 - G 72 -6.8 -4.20368 | gap 1, overlap 3783886 3783916 CCAGCGCAATAGAAA CCGCGCCGAAGATCACC GAC AGCG-CCTTCGGCACCG TACGCGGCGGCACCA TERM 4712 3784159 - 3784143 - G 75 -5.1 -4.67607 | overlap 3784144 TGGGTAATAAACAAA CTGGCAA ACA TTGCCAC AAAGGCGGTCACGGT TERM 4713 3784324 - 3784334 + g 77 -8.2 -4.09864 | GTCGGGTGATGGCAT CCGC GCC GCGG TTTTCGGCAATAAAT yicN 3785047 - 3784568 - | hypothetical protein TERM 4714 3785894 - 3785916 + r 82 -5.6 -5.16237 | opp_overlap 3785869 TCACCAGCGTGTCTT TATTGGCG ACAATAA CGCCAGTA TTTTTTAATCCCATT SSON_3617 3786474 - 3785971 - | IS1 ORF TERM 4715 3787003 - 3786981 - H 72 -2.8 -5.09245 | TCAAAATGAGAAAAA TATGAATAAT TCT ATTAACCATA AATTTCATCACATTA yicP 3786982 - 3788748 + | cryptic adenine deaminase TERM 4716 3788774 - 3788756 - T 100 -13.1 -5.64873 | CGGAATAATAAAAAA GCCCGGC GTCAT GCCGGGC AAAAGTCACCAGTTA uhpT 3790184 - 3788793 - | sugar phosphate antiporter TERM 4717 3789617 - 3789603 - G 70 -6.4 -4.20368 | overlap 3789605 CGACGGGAAGATAAA CATGCC GAT GACATG GCCATCGAACAGGTA TERM 4718 3790145 - 3790167 + g 71 -9.1 -3.53012 | CTTCGAGCGGAAGGT CCAGGGTCG GCTTG CGAACCTGG TTTAAGAAAGCCAGC uhpC 3791644 - 3790322 - | regulatory protein UhpC TERM 4719 3790604 - 3790592 - G 73 -9.1 -3.65581 | ACCAATGGTGAAGAA GCAGG TTG CCTGC ATCACGTAGCTGGCA uhpB 3793156 - 3791651 - | sensory histidine kinase UhpB TERM 4720 3791943 - 3791912 - G 72 -8 -3.88498 | opp_overlap 3791911 3791912 3791914 CTGGCAGACACGAAA CAGCGTCACGCG CTGGTTTT CGCTTAACGCTG ATTCATCGATTCGCC TERM 4721 3792089 - 3792075 - G 72 -7 -4.21631 | AACCGACCCAACAAA CGGCGC ACC GCGTCG TAAACGCCCAGCGAT uhpA 3793743 - 3793153 - | DNA-binding transcriptional activator UhpA TERM 4722 3793795 - 3793771 - R 100 -12.2 -6.06723 | opp_overlap 3793770 3793768 3793771 GCGGGTAAAAAAAAA CGCGCTTACC TTAAC GATAAGCGCG ATGTTGTTCAAGCCT ilvN 3794108 - 3793818 - | acetolactate synthase 1 regulatory subunit TERM 4723 3793949 - 3793960 + g 74 -5.8 -4.45485 | CGTCATTGACCAGTA GCCA GATA TGGC TTTTGTCGCTGTCCT ilvB 3795800 - 3794112 - | acetolactate synthase catalytic subunit TERM 4724 3795878 - 3795854 - R 85 -7.1 -4.98531 | gap 1, opp_overlap 3795831 3795854 TGCTTAAACGAAAAA CCCCGCCCGG TTTGCG CCGA-CGGGG TTTTGGAATCGTGTG ivbL 3796004 - 3795906 - | ilvB operon leader peptide TERM 4725 3795941 - 3795977 + g 70 -5.8 -4.27584 | gap 1, overlap 3795950 CCACCACCACACGCA CGACGACC-ACTGCGGC GGAT GGCGCAGTTGGTAGTAG TTTTGCGTTGAACAT TERM 4726 3796155 - 3796140 - H 100 -8.2 -5.60689 | opp_overlap 3796140 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTCGTCAGTCGCCC TERM 4727 3796681 - 3796702 + H 100 -17.3 -4.79451 | opp_overlap 3796681 TCAAGTCGCACCAAA GGGGAGCGG GTAA CCGCTCCCC TTTTATATTTAGCGT TERM 4728 3796702 - 3796681 - H 100 -17.3 -3.74747 | opp_overlap 3796681 TCAAGTCGCACCAAA GGGGAGCGG GTAA CCGCTCCCC TTTTATATTTAGCGT TERM 4729 3796772 - 3796791 + H 74 -3.5 -4.93288 | overlap 3796773 GCCCTACCATCTCTC CCGGCAA CATTTA TTGCCGC TTTTGTTTACATATT emrD 3796932 - 3798122 + | multidrug resistance protein D yidF 3798627 - 3798130 - | putative transcriptional regulator TERM 4730 3798257 - 3798223 - G 90 -7.7 -4.92757 | opp_overlap 3798223, overlap 3798243 GGAGTAAGAATAAAA CGCCTGATAGCCCGC ACAAA GCACGCTGTCTGGCG TCTCCTGCCGAGCGT TERM 4731 3798559 - 3798545 - G 73 -4.2 -4.86033 | opp_overlap 3798549 3798551 AAATTGTGATAAAAA TCGGCA GGT TGCAGA GCATCCTTGTACTCT yidG 3798986 - 3798624 - | hypothetical protein yidH 3799323 - 3798976 - | hypothetical protein TERM 4732 3799698 - 3799713 + G 70 -6.1 -4.17556 | CGCACTGGCCATTGC TGCGC TACTTT GCGCA TTTGTTGGCGGTATG yidI 3799432 - 3799881 + | hypothetical protein TERM 4733 3799862 - 3799876 + T 72 -9.2 -3.53811 | TCTTTTCCTTCCTGA CCGGCG GTT CGCTGG TTTAAGCAGCCTGAA TERM 4734 3799929 - 3799939 + T 88 -5.4 -5.47159 | AGCGGGCATTATCGT CAGA ACT TCTG TTTTTTCTCTTCCAC TERM 4735 3800129 - 3800146 + T 70 -9.9 -2.94888 | overlap 3800127 3800117 TGGCCCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT SSON_3632 3801278 - 3800130 - | putative virulence protein TERM 4736 3800705 - 3800718 + g 73 -3.8 -4.83615 | overlap 3800693 GTCGCTGAAGTCTCG CCAG CTTCTT CTGG TTTTTCTGAAAACTG TERM 4737 3800993 - 3801024 + g 77 -5.9 -4.65895 | gap 1 CGAGCTTAACGCCCT GCGGGTAGCGGAAT ACATC ATTCTG-TCCCCGC TTTTTGAATCGGGGA TERM 4738 3801384 - 3801374 - R 76 -4.6 -5.04249 | CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT TERM 4739 3801831 - 3801786 - R 95 -11.7 -4.11216 | opp_overlap 3801799 3801822, overlap 3801787 TGGTTAGGTGGAAAA CCGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACGGCGCAC CGGATAAATTTGGTT TERM 4740 3801830 - 3801787 - R 93 -15.2 -3.06515 | opp_overlap 3801799 3801822, overlap 3801786 GGTTAGGTGGAAAAC CGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACGGCGCA CCGGATAAATTTGGT TERM 4741 3801799 - 3801818 + r 87 -10.6 -4.07568 | opp_overlap 3801787 3801786 AACCGCGCCTTATAT CCCCGCCC TGAA GGACGGGG TTTTACGGCGCACCG TERM 4742 3801904 - 3801872 - R 87 -11.3 -3.90922 | overlap 3801874 3801875 AGCCGTGCTAAAGAA TACGGACCAGCACCC AAC GGATGCCAGTCCACA CAATTAACGTAACTC TERM 4743 3801902 - 3801874 - R 86 -11.7 -3.54488 | overlap 3801872 3801875 CCGTGCTAAAGAATA CGGACCAGCACCC AAC GGATGCCAGTCCA CACAATTAACGTAAC TERM 4744 3801901 - 3801875 - R 81 -13 -2.72371 | overlap 3801874 3801872 CGTGCTAAAGAATAC GGACCAGCACCC AAC GGATGCCAGTCC ACACAATTAACGTAA glvC 3805108 - 3803231 - | phosphotransferase system enzyme IIBC component TERM 4745 3803540 - 3803551 + g 70 -5.8 -4.22041 | TGCCGCGGTGGTTTG GCCT CGCG AGGC TTTGTATTCGGCTTT TERM 4746 3803987 - 3803977 - G 75 -6.8 -4.43208 | ACATCGCTAAAGAAA TGCC CAC GGCA CCAAAGATTTTTGAG TERM 4747 3805054 - 3805072 + g 86 -6.1 -5.10497 | opp_overlap 3805052 3805054 ACACAGCATCGAACA CATCTTT AAAAA AAAGATG TTTTTTCAATCGATT TERM 4748 3805848 - 3805814 - g 75 -11.5 -3.10071 | gap 1, opp_overlap 3805817 AAATGCCAGCGAATA CCAGGTGGAGT-ACCA TTTA CGGCGACTCCACCCGG AAAAGAGTTAACCGA yidP 3805143 - 3805859 + | putative transcriptional regulator yidE 3807517 - 3805856 - | hypothetical protein TERM 4749 3807697 - 3807677 - R 100 -14.7 -5.90231 | AGAAAGACAAAAAAA GCCCCACCA GAA TGGCGGGGC AAAGAGAATAGCTAG ibpB 3808141 - 3807713 - | heat shock chaperone IbpB TERM 4750 3807866 - 3807895 + g 88 -2.1 -5.57729 | opp_overlap 3807866 3807867, overlap 3807856 AAAGCTCAGGCTAAA TGGCTGATTCA TAAGCCCT TGATGCAGCCA TTTTTTCTCTTCTTT ibpA 3808666 - 3808253 - | heat shock protein IbpA yidQ 3808972 - 3809304 + | hypothetical protein yidR 3810556 - 3809306 - | hypothetical protein TERM 4751 3809748 - 3809709 - G 72 -8.4 -3.71649 | gap 1, opp_overlap 3809709 3809712 TGGGTAAAGGTTAAA CGTCGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGGTGG TTTCCGTTCCACTTA TERM 4752 3809709 - 3809748 + g 72 -8.4 -3.76839 | gap 1, opp_overlap 3809709, overlap 3809712 TGGGTAAAGGTTAAA CGTCGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGGTGG TTTCCGTTCCACTTA TERM 4753 3809712 - 3809745 + g 82 -13.1 -2.9732 | gap 1, opp_overlap 3809709, overlap 3809709 GTAAAGGTTAAACGT CGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGG TGGTTTCCGTTCCAC TERM 4754 3809992 - 3810002 + g 70 -4.6 -4.4715 | TGCCGCTGTATTCAC GCGG ATG CTGC TTTTGTACGTTGACC TERM 4755 3810736 - 3810722 - g 81 -6.4 -4.82901 | overlap 3810725 3810726 CGCGCTGGATAAAAA GCACCA GCA TGGTAC TGAAGGTTTCAGCAA TERM 4756 3811496 - 3811510 + G 70 -10 -3.20348 | overlap 3811481 CTATGCGCTGGATAG CGCAGA CAT TCTGCG TTCGGTGTTACTGAA TERM 4757 3811627 - 3811606 - g 95 -9.4 -4.87807 | opp_overlap 3811606 GCAAGATAGTAAAAA GCCGATGC CTGACC GCACCGGC TTTAAGAAAGTGGAT TERM 4758 3811671 - 3811637 - g 70 -6.5 -4.15222 | ACCGGCTTTAAGAAA GTGGATTATGCGC AGTGGTGTG GCACATATTCCAC AGTTGAAGGATTAGC yidS 3810621 - 3811685 + | putative oxidoreductase dgoT 3813019 - 3811682 - | D-galactonate transport TERM 4759 3812214 - 3812204 - G 77 -3.2 -5.08601 | overlap 3812192 CCAGGTTAAGAAAAA CCAC AGT GTAG AAGCCACCGCAAATT dgoK 3815718 - 3814840 - | 2-oxo-3-deoxygalactonate kinase SSON_3645 3816011 - 3815715 - | putative FADA-type transcriptional regulator SSON_3646 3816598 - 3817005 + | hypothetical protein TERM 4760 3817053 - 3817003 - T 100 -16.4 -3.57418 | gap 1, opp_overlap 3817006, overlap 3817006 TATGCAGTAAACCAA TAATCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGCCCACAGATTA ATTCAGCACATACTT TERM 4761 3817006 - 3817050 + T 73 -10 -3.34013 | gap 1, opp_overlap 3817003 3817006 GCAGTAAACCAATAA TCAGTAAGCGGGCAAAC-GCG TTTA TGCTGTTTGCCCGCCCACAGA TTAATTCAGCACATA TERM 4762 3817050 - 3817006 - T 100 -13.7 -3.91541 | gap 1, opp_overlap 3817006, overlap 3817003 GCAGTAAACCAATAA TCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGCCCACAGA TTAATTCAGCACATA yidA 3817863 - 3817051 - | sugar phosphatase TERM 4763 3817771 - 3817783 + g 72 -5.5 -4.56775 | GCCACGGGCGCGAGC TGCGG CAA TCGCA TTTTTAACGGCGGGT TERM 4764 3817969 - 3817942 - R 76 -8.4 -4.19258 | opp_overlap 3817941 3817942 ACACCCGAGGGAAAA GGGGGATGCAAC GCGG GTTGCATGCTCC CCATTTGCTTAGCGG yidB 3818385 - 3817978 - | hypothetical protein TERM 4765 3818454 - 3818484 + r 100 -17 -3.47751 | opp_overlap 3818459, overlap 3818459 GCGGATTGCAGAAAT AAAAAGGGCGGAGA TGA TCTCCGCCCTTTTC TTATAGCTTCTTGCC TERM 4766 3818459 - 3818479 + r 100 -16.9 -4.80959 | opp_overlap 3818459, overlap 3818454 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTTCTTATAGCTTC TERM 4767 3818479 - 3818459 - R 100 -16.9 -5.38054 | opp_overlap 3818454 3818459 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTTCTTATAGCTTC gyrB 3821030 - 3818616 - | DNA gyrase subunit B TERM 4768 3819798 - 3819812 + g 74 -10 -3.53012 | CGCCGGATCGCGTTC CTGGCA GTC TGCCAG TTTGCCCGGCAGGCC TERM 4769 3820104 - 3820115 + g 79 -2.2 -5.21709 | overlap 3820085 ATCGTCACCGGTGGC GCTA ACTT TGGC TTTTTTGCTGTAGCC TERM 4770 3820620 - 3820643 + g 77 -6.6 -4.56597 | ACGGTGAATTTTACC CTCGCGCTGG ATAA CCAGCTCCAG TTTTTGCGACAGGGC recF 3822132 - 3821059 - | recombination protein F TERM 4771 3821574 - 3821614 + g 70 -10.3 -3.15078 | overlap 3821566 3821564 3821572 GCCAGGTGCTGATTT GCTCCGCCAGCGGGATCAG CTC TTTATCCCACGGGCGTAGC TGTTCGTAACGTGTC TERM 4772 3821999 - 3821980 - G 73 -9.2 -3.63968 | overlap 3821973 CTGCAAACTGCGAAA CGCCCGAC CATG GCCGAGCG TATAGATGGCTTCCA dnaN 3823232 - 3822132 - | DNA polymerase III subunit beta dnaA 3824640 - 3823237 - | chromosomal replication initiation protein TERM 4773 3824169 - 3824200 + g 80 -11.5 -3.30781 | overlap 3824165 3824173 CGCCAGGGTTATCCG CCACCTGGCGAGC CGCCGC GCGCGCCAGTTGG TTAGATTTACCTTCA TERM 4774 3824173 - 3824196 + g 71 -9.5 -3.43217 | overlap 3824169 3824165 AGGGTTATCCGCCAC CTGGCGAGC CGCCGC GCGCGCCAG TTGGTTAGATTTACC TERM 4775 3824311 - 3824330 + g 74 -10 -3.54129 | gap 1, opp_overlap 3824310 3824309, overlap 3824329 TGAGCGCGTAGAAGG CGCAGCACG TTG CG-GCTGCG TTTGCGCCACCTGTG rpmH 3825247 - 3825387 + | 50S ribosomal protein L34 TERM 4776 3825588 - 3825568 - gf 74 -2.6 -5.06816 | gap 1 AGTCGCCAAGAAAAA CGTTCGACG CGCC CAT-GAACG CAATCGGATTAAACG rnpA 3825404 - 3825763 + | ribonuclease P yidD 3825727 - 3825984 + | hypothetical protein yidC 3825987 - 3827633 + | putative inner membrane protein translocase component YidC TERM 4777 3827677 - 3827658 - f 79 -9.2 -4.17048 | opp_overlap 3827659, overlap 3827659 TTTTCGCTAAAATAA GGGCGGTC AGTT GACCGCCT TTTTTCTTTTCGTAG TERM 4778 3827676 - 3827659 - f 80 -12.7 -3.09908 | opp_overlap 3827659, overlap 3827658 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 4779 3827659 - 3827676 + F 100 -12.7 -5.83211 | opp_overlap 3827658 3827659 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 4780 3828761 - 3828747 - g 76 -7.8 -4.15044 | overlap 3828757 GTGGTGCGCAATAAA GCCGAT ATC ACCGGC GAAACGCTGGGAATG trmE 3827739 - 3829103 + | tRNA modification GTPase TrmE TERM 4781 3829112 - 3829147 + T 86 -12 -3.53712 | gap 1, opp_overlap 3829105 3829117, overlap 3829105 3829111 3829113 3829135 TAAGTAACCGCGCTT ACGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCGC TTCATTGTTAGCACT TERM 4782 3829113 - 3829146 + T 90 -15.5 -2.71745 | gap 1, opp_overlap 3829105 3829117, overlap 3829105 3829111 3829112 3829135 AAGTAACCGCGCTTA CGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCG CTTCATTGTTAGCAC SSON_3658 3829771 - 3829268 - | IS1 ORF TERM 4783 3830275 - 3830285 + r 77 -6.8 -4.55295 | opp_overlap 3830274 GCGCTGGTCGAAATG GCGT CCG ACGC TTTGTTTATGCCAGC TERM 4784 3830651 - 3830633 - R 78 -6.6 -4.61482 | overlap 3830636 CCGCGCAAAAAAGAA CAGCCGCG CGG CGCAGGTG AAGTGACGATTATCG glpR 3832533 - 3831775 - | DNA-binding transcriptional repressor GlpR TERM 4785 3832264 - 3832297 + g 70 -6.1 -4.17914 | gap 2 CAGTGTCGAGCCGTT GGGGATTTGCTCCGC CACTTT GCGG-GCAA-TCCTC TCTTTTTCTTCGGTC glpG 3833380 - 3832550 - | intramembrane serine protease GlpG TERM 4786 3833234 - 3833193 - G 74 -10.1 -3.48276 | opp_overlap 3833182 3833193, overlap 3833194 CTGGCCGCCAGATAA CGCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGCC CGTACGCGCTCGGCC TERM 4787 3833233 - 3833194 - G 84 -13.6 -2.68823 | opp_overlap 3833182 3833193, overlap 3833193 TGGCCGCCAGATAAC GCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGC CCGTACGCGCTCGGC TERM 4788 3833354 - 3833336 - G 72 -5.8 -4.33621 | overlap 3833332 3833338 CATGTAATCAACAAA CGCCTGCG CCA CGCGGGGG TTAGCAAAAGAGGTA glpE 3833751 - 3833425 - | thiosulfate sulfurtransferase TERM 4789 3833891 - 3833906 + H 71 -7.6 -3.95219 | opp_overlap 3833891 GATTCTTTGCTAATA TGTTCG ATAA CGAACA TTTATGAGCTTTAAC glpD 3833941 - 3835446 + | glycerol-3-phosphate dehydrogenase TERM 4790 3835453 - 3835478 + T 79 -9.8 -3.81027 | gap 1, opp_overlap 3835450, overlap 3835454 GCGTCGTAAGGATGA T-GCCCGGTTG AAGTG CAACCGGGCTA TTTGGATTCCTTAGA TERM 4791 3835454 - 3835476 + T 95 -14.9 -3.48598 | opp_overlap 3835450, overlap 3835453 CGTCGTAAGGATGAT GCCCGGTTG AAGTG CAACCGGGC TATTTGGATTCCTTA TERM 4792 3835816 - 3835834 + T 79 -4.4 -5.26875 | opp_overlap 3835816 GACCGGCGAAAAGAC CAGCCAGC AAT GCAGTCTG TTTTTTAATTCAGGA SSON_3664 3836873 - 3836106 - | hypothetical protein SSON_3665 3837586 - 3836876 - | hypothetical protein TERM 4793 3837006 - 3836972 - G 70 -5.6 -4.35926 | opp_overlap 3836972, overlap 3836965 ACGCGAAAGGGAAAA GCTGGGGCGAATGCAA CTA TTGCAGTCTCGACAGC TTTCCTCTGCGCAAT SSON_3666 3839107 - 3837602 - | hypothetical protein TERM 4794 3839266 - 3839291 + H 100 -9.8 -5.61596 | opp_overlap 3839266 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 4795 3839291 - 3839266 - H 72 -9.1 -3.61398 | opp_overlap 3839266 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 4796 3839669 - 3839630 - g 76 -7.8 -4.25104 | overlap 3839650 GCGTGTTCACGAAAA CAGCGCAGCTCTGGCATA ACGC CACGCCACATCCGCACTG GTGCGGCCTGACCCT SSON_3667 3839281 - 3840627 + | IS4 orf TERM 4797 3840638 - 3840609 - T 89 -9.3 -4.59109 | overlap 3840611 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TAGACCCTTTGGCCC TERM 4798 3840636 - 3840611 - T 100 -16.3 -3.90762 | overlap 3840609 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAGACCCTTTGGC glgP 3843121 - 3840674 - | glycogen phosphorylase TERM 4799 3840913 - 3840892 - G 72 -10.1 -3.38316 | opp_overlap 3840891 TGATCAGCGAATCAA CCAGATCGC GATA GCGACCCGG ATCTTCCGGACTGAA TERM 4800 3842739 - 3842771 + g 88 -8.9 -4.72497 | overlap 3842740 3842742 AAGCAAGCCGCCAGA CGTCCCAGGCCACCG TTA CCGAGGCCTGGGTCA TTTTCTTCATCAATC TERM 4801 3842740 - 3842770 + g 86 -12.4 -3.42775 | overlap 3842739 3842742 AGCAAGCCGCCAGAC GTCCCAGGCCACCG TTA CCGAGGCCTGGGTC ATTTTCTTCATCAAT TERM 4802 3842742 - 3842768 + g 95 -13.6 -3.27725 | overlap 3842740 3842739 CAAGCCGCCAGACGT CCCAGGCCACCG TTA CCGAGGCCTGGG TCATTTTCTTCATCA glgA 3844573 - 3843140 - | glycogen synthase TERM 4803 3843807 - 3843819 + g 82 -7.7 -4.46212 | opp_overlap 3843800 AACAGTAAGTCCGTC TCTGG ACT CCAGA TTTTCTCGTCCACGC glgC 3845868 - 3844573 - | glucose-1-phosphate adenylyltransferase TERM 4804 3845377 - 3845391 + g 84 -7.8 -4.60487 | opp_overlap 3845376 3845377 TGGCATACAAGCAAC GGTGCA ACG TGCGCC TTTTTCGACGTGATC glgX 3847859 - 3845886 - | glycogen debranching enzyme TERM 4805 3847445 - 3847404 - G 71 -10.7 -2.91395 | opp_overlap 3847409 3847412, overlap 3847403 3847406 ATGGGCTTCATAAAT GATGGTGCTGCCCCACGGC GTGC GCGGCGGGGCATCATCTTC CCAGTCATAGTGATC TERM 4806 3847492 - 3847463 - G 70 -10 -3.2056 | opp_overlap 3847479 AGTCATAGTGATCAA CCACCACTACGC ATTTCG GCGCAATGGCGG CGTTGTCGCGATAGT glgB 3850042 - 3847856 - | glycogen branching enzyme TERM 4807 3848433 - 3848443 + g 83 -5.4 -5.0538 | TCGCCCGGCATGCGG TCGA GAA TCGA TTTTTTACCGTGGAC TERM 4808 3849319 - 3849337 + g 91 -7.4 -5.09173 | CATAAATAGAGATTG GCGCATCA AAC TGATTCGC TTTTTTGCGCTCTTC TERM 4809 3850296 - 3850279 - R 71 -9.8 -3.15996 | opp_overlap 3850277 3850276, overlap 3850277 TATTACGCACTAACA GGGGCG GCATCG CGCCCC AGATTTAATGAATAA asd 3851418 - 3850315 - | aspartate-semialdehyde dehydrogenase yhgN 3851610 - 3852203 + | dITP- and XTP- hydrolyzing protein TERM 4810 3852212 - 3852243 + T 78 -6.6 -4.67982 | opp_overlap 3852212, overlap 3852207 GGGGTAAGGTTCAAA CAGGTGCTGC ACACAACCAGAC GCGGCACCTG TTTTATTACCTGAAC SSON_3675 3853544 - 3852249 - | putative DNA processing protein TERM 4811 3853226 - 3853174 - G 74 -8.4 -3.9777 | gap 1 GTTAAGATCCATAAA CCGGCGCGTTGCCACTTATCTACCG CCAA CGCCAGACTA-TGACCACGCGCCAG CAAGCCAAGAATACG SSON_3676 3854164 - 3853661 - | IS1 ORF TERM 4812 3854402 - 3854430 + r 77 -7.3 -4.40358 | opp_overlap 3854400, overlap 3854403 3854426 CTAAATCAGTAAGTT GGCAGCATCACCG AAA CGGTTTTGCTGCA TTTTCTGCGGTGGAT TERM 4813 3854403 - 3854429 + r 74 -10.8 -3.23733 | opp_overlap 3854400, overlap 3854402 3854426 TAAATCAGTAAGTTG GCAGCATCACCG AAA CGGTTTTGCTGC ATTTTCTGCGGTGGA SSON_3677 3856198 - 3854387 - | hypothetical protein TERM 4814 3856329 - 3856298 - R 83 -8.8 -4.31766 | opp_overlap 3856302, overlap 3856302 AGGAGATAAGAGAAA TGAATTACTGCGAG CAAG CTCGCAGTAATTTG TCGCAGTAATTAACT TERM 4815 3856302 - 3856325 + r 100 -14 -3.88559 | opp_overlap 3856302 3856298 GATAAGAGAAATGAA TTACTGCGAG CAAG CTCGCAGTAA TTTGTCGCAGTAATT TERM 4816 3856325 - 3856302 - R 100 -14 -3.70947 | opp_overlap 3856302, overlap 3856298 GATAAGAGAAATGAA TTACTGCGAG CAAG CTCGCAGTAA TTTGTCGCAGTAATT gntU 3857679 - 3856339 - | low affinity gluconate transporter TERM 4817 3857654 - 3857626 - G 73 -3.9 -4.77036 | overlap 3857628 3857629 CTTCATGACTAAAAA CAGCAGCAG TAAAACAGACC CTACTGCTG TTAAAACAAGCGTTA gntK 3858210 - 3857683 - | gluconate kinase 1 TERM 4818 3858268 - 3858242 - R 78 -5.2 -5.01845 | opp_overlap 3858242 TACAAGAATTAAAAA TGTTACGGGTAA CTG TTATCGGTAACA TTGTCCAGCCGGACA gntR 3859287 - 3858349 - | regulator of gluconate (gnt) operon TERM 4819 3859073 - 3859085 + g 76 -9.1 -3.75629 | opp_overlap 3859068 GTCTGATAACCGTGC GCGTC GGT GACGC TTTCGATTCCGCGTA TERM 4820 3859518 - 3859487 - R 100 -13.6 -4.10429 | overlap 3859477 AACGACGCGGTAAAA CCCCGGAAGCGTGC ATCA GCACGCGACCGGAG CGAGCGAGGAAGCCT yhhW 3860263 - 3859568 - | hypothetical protein yhhX 3861423 - 3860386 - | putative dehydrogenase TERM 4821 3861565 - 3861549 - H 100 -9.4 -6.21477 | AAGATCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAATACTGGAA yhhY 3861664 - 3862221 + | putative acetyltransferase YhhY SSON_3684 3862449 - 3862952 + | IS1 ORF ggt 3864445 - 3862946 - | gamma-glutamyltranspeptidase TERM 4822 3863951 - 3863963 + g 71 -9.1 -3.51934 | overlap 3863949 CACGACTTTGTTCAG CGGCA TGG TGCCG TATTTATCCAGCGCC TERM 4823 3864419 - 3864436 + g 90 -9.1 -4.51699 | opp_overlap 3864403 AGCAGCAATGGCCAC CCGGCGT AAAA ACGTCGG TTTTATCATCGTTAT TERM 4824 3864587 - 3864600 + G 72 -8.1 -3.95219 | overlap 3864597 GACTTCTGATTCTTA CGGCA CTCC TGCCG TTTGTCGGCTTTGCA TERM 4825 3864972 - 3864939 - g 81 -9.5 -4.13654 | GCCGGAAAGGAGAAA CGGCGACATGCTGAA TCAG CCCAGCACGCCGCAG CCTGACATTCCGTTG yhhA 3864565 - 3865005 + | hypothetical protein ugpQ 3865735 - 3864992 - | cytoplasmic glycerophosphodiester phosphodiesterase TERM 4826 3865053 - 3865084 + g 95 -12.2 -4.17556 | gap 1, opp_overlap 3865051 3865047 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GCCGC-GCGCTGGGG TTTATTGACGGTATA ugpC 3866802 - 3865732 - | glycerol-3-phosphate transporter ATP-binding subunit ugpE 3867649 - 3866804 - | glycerol-3-phosphate transporter membrane protein TERM 4827 3867107 - 3867093 - G 70 -3.5 -4.65263 | ATGTCGCAAAAGAAA CGCAT TGGTG ACGCG CCGTCGATCCGCGCG ugpA 3868533 - 3867646 - | glycerol-3-phosphate transporter permease TERM 4828 3869960 - 3869945 - R 72 -9 -3.53811 | opp_overlap 3869937 3869939 3869945 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG TERM 4829 3869945 - 3869960 + r 70 -9 -3.35996 | opp_overlap 3869945, overlap 3869937 3869939 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG livF 3870692 - 3869979 - | leucine/isoleucine/valine transporter ATP-binding subunit TERM 4830 3870534 - 3870506 - G 71 -9.5 -3.48024 | overlap 3870509 CTTTATCATCAAACA CAATTCGCCCGCT GGT AGCGCGCGGATCG CCGCATAACGTGCCG TERM 4831 3870531 - 3870509 - G 72 -7.6 -3.87323 | overlap 3870506 TATCATCAAACACAA TTCGCCCGCT GGT AGCGCGCGGA TCGCCGCATAACGTG livG 3871461 - 3870694 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 3872735 - 3871458 - | leucine/isoleucine/valine transporter permease subunit livH 3873658 - 3872732 - | branched-chain amino acid transporter permease subunit LivH TERM 4832 3873539 - 3873523 - G 79 -10.1 -3.72241 | opp_overlap 3873523 TACCAATCATGTAAA CCTCGCC GTG GGCGAAG TTGATCATGCCGATA TERM 4833 3873698 - 3873676 - R 72 -9 -3.55622 | overlap 3873677 GGTAACCTTTCTAAA CCCGCCCGCA TTT CACGGGCGGT GGGATGATCACTTGG TERM 4834 3873697 - 3873677 - R 78 -12.5 -2.73159 | overlap 3873676 GTAACCTTTCTAAAC CCGCCCGCA TTT CACGGGCGG TGGGATGATCACTTG livK 3874815 - 3873706 - | high-affinity leucine-specific transport system; periplasmic binding protein TERM 4835 3875183 - 3875173 - H 95 -3.2 -5.88476 | AAAAGAAATAAAAAA GAGA AAG CCTC CGATTAAATTATTTC yhhK 3875239 - 3875622 + | hypothetical protein TERM 4836 3875794 - 3875812 + T 70 -10.3 -2.5785 | opp_overlap 3875785 3875789, overlap 3875793 ATATTAGCAATTTGG CGGCAAC CCAAA GTTGCCG ATTAATGATTACTTC livJ 3876981 - 3875821 - | high-affinity amino acid transport system; periplasmic binding protein TERM 4837 3876652 - 3876663 + g 70 -5.8 -4.15044 | CACATATTTAATGCC GTCG TTAA CGAC TTTGTTCGCCACCGC TERM 4838 3877173 - 3877154 - R 100 -7.8 -5.75538 | opp_overlap 3877154 CCCAAAAAACAAAAA CCCCGGAC TCGC ATCCAGGG TTCTCTGCTTAATAG rpoH 3878049 - 3877195 - | RNA polymerase factor sigma-32 TERM 4839 3878285 - 3878236 - R 79 -10.1 -3.68292 | gap 1, opp_overlap 3878236, overlap 3878222 3878237 ACCGGGAAGAGACAA CGGGAT-CTCTTTCCCTGCTACGG AAC CCATTGCAGGGAAAGAGTATAACA CGCTTTTATTATTCA TERM 4840 3878284 - 3878237 - R 74 -11.4 -2.80493 | gap 1, opp_overlap 3878236, overlap 3878222 3878236 CCGGGAAGAGACAAC GGGAT-CTCTTTCCCTGCTACGG AAC CCATTGCAGGGAAAGAGTATAAC ACGCTTTTATTATTC ftsX 3879352 - 3878294 - | cell division protein FtsX TERM 4841 3878978 - 3879000 + g 77 -3.3 -5.03314 | gap 1 CTGTGCCACCACGCC CGCAGCGGCG TCAT CGTC-CAGCG TTTTTTGCAAGTAAA ftsE 3880013 - 3879345 - | cell division protein FtsE ftsY 3881512 - 3880016 - | cell division protein FtsY TERM 4842 3880443 - 3880423 - G 77 -10.3 -3.65812 | opp_overlap 3880423, overlap 3880425 TGGCGTCGAAGATAA CAGAGGCGG AAT CCGCCCCGG TATGCTGGGCAATCA TERM 4843 3880441 - 3880425 - G 80 -11.5 -3.41024 | opp_overlap 3880423, overlap 3880423 GCGTCGAAGATAACA GAGGCGG AAT CCGCCCC GGTATGCTGGGCAAT TERM 4844 3881684 - 3881671 - g 87 -4.5 -5.1861 | TTTATCATGAAAAAA CCGAA TCAT TCCGG CAGCGGCCAAATCCG yhhF 3881662 - 3882258 + | 16S rRNA m(2)G966-methyltransferase TERM 4845 3882436 - 3882472 + G 77 -10.3 -3.62572 | gap 1, opp_overlap 3882419 3882435, overlap 3882439 TGGCCCGCAGATGAC CACCGCCGAAAAGGTA CGGATT TTCCTTTTCGGCG-TG TTTGAACTGCTGGTC TERM 4846 3882439 - 3882470 + G 89 -13.1 -3.39018 | opp_overlap 3882435, overlap 3882436 CCCGCAGATGACCAC CGCCGAAAAGGTA CGGATT TTCCTTTTCGGCG TGTTTGAACTGCTGG yhhL 3882248 - 3882517 + | hypothetical protein TERM 4847 3882541 - 3882515 - T 75 -3.1 -5.22039 | overlap 3882502 TTTAAAGTTAAAAAA TAACCTTATTG TTCGC CAACAAAGCTA ACAAAGCGCGTTCCT yhhM 3882879 - 3882520 - | putative receptor TERM 4848 3883251 - 3883265 + G 71 -3.4 -4.8048 | overlap 3883252 3883253 CGTCAACGTCTGATG TACGCC ATC GGCGCG TTTTTCCTCTCGCAC yhhN 3883020 - 3883646 + | putative enzyme TERM 4849 3883657 - 3883676 + F 80 -12.2 -3.01984 | opp_overlap 3883653 3883652 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA TERM 4850 3884453 - 3884432 - g 83 -10.1 -4.13654 | CGCTGAAACCAGAAA CCGCCACGC GCCT GCGTAACGG TGAGCGGGAAGAGGT zntA 3883720 - 3885918 + | zinc/cadmium/mercury/lead-transporting ATPase TERM 4851 3885950 - 3885925 - T 74 -8.3 -3.83724 | AGGAGATAAGGCAAA CCGATCGCA ACATTGAG CGCGATCGG TCCCCTCGCCCCTCT yhhP 3886265 - 3886020 - | cell developmental protein SirA TERM 4852 3886120 - 3886104 - G 70 -4.3 -4.52803 | CATAAAGGTACAAAA CCCAGGA ATA TCGCGGG TAGTGGCCGGATCGT TERM 4853 3886938 - 3886956 + G 95 -6.6 -5.1963 | overlap 3886939 CACACTGTTCGGTAA CGTCAGCG ACA CGCTGGCC TTTTTCTTCATTGCC TERM 4854 3886939 - 3886955 + G 77 -10.1 -3.70694 | overlap 3886938 ACACTGTTCGGTAAC GTCAGCG ACA CGCTGGC CTTTTTCTTCATTGC yhhQ 3886486 - 3887151 + | hypothetical protein SSON_3710 3887224 - 3887781 + | hypothetical protein TERM 4855 3887799 - 3887826 + T 100 -13.4 -5.52384 | opp_overlap 3887794 TTTAAGATGATGAGG CGGCCTCAGGGA CGTG TTCCGGAGGCCG TTTTTTTAATCGCCA yhhS 3889002 - 3887785 - | hypothetical protein TERM 4856 3889546 - 3889530 - g 75 -5.1 -4.60041 | ATGGACTCGGAAAAA GTGGTTA CCT TCACCAC AGCGCTAATGACCGG yhhT 3889053 - 3890183 + | hypothetical protein TERM 4857 3890463 - 3890431 - g 82 -11.3 -3.53224 | opp_overlap 3890421 3890458, overlap 3890452 CATTCGCGCCGGAAA CGCCGCTATGGTTCA ACT TAAGCCATAGCGGTG ACGATATCGCTCTGC yhhU 3890238 - 3890825 + | holo-(acyl carrier protein) synthase 2 nikA 3890936 - 3892510 + | periplasmic binding protein for nickel TERM 4858 3892556 - 3892576 + G 90 -7.5 -4.93296 | overlap 3892559 TGCTGATCCCGATGG TGCTCGCCG CCT CGGTGATCA TTTTTCTGATGCTGC nikB 3892510 - 3893454 + | nickel transporter permease NikB nikC 3893451 - 3894284 + | nickel transporter permease NikC nikD 3894284 - 3895048 + | nickel transporter ATP-binding protein nikE 3895045 - 3895851 + | nickel transporter ATP-binding protein TERM 4859 3896067 - 3896049 - g 79 -4.5 -4.89233 | opp_overlap 3896050, overlap 3896040 3896050 TATGAACACGAAAAA CGCGACT TAGCC AGCCGCA TTGTCTCCACCCAGC yhhG 3895857 - 3896258 + | nickel responsive regulator TERM 4860 3896328 - 3896285 - T 76 -4.2 -4.96388 | gap 1, opp_overlap 3896293 3896298, overlap 3896287 3896293 AACGAGGAAAGAAAA GATATTAACTGAACTTAATTT ATA AAATTAAGTTCAGTTG-CATA GATAGATCCTGTAAA TERM 4861 3896328 - 3896287 - T 83 -9.9 -4.08958 | gap 1, opp_overlap 3896293 3896298, overlap 3896285 3896293 CGAGGAAAGAAAAGA TAT-TAACTGAACTTAATTT ATA AAATTAAGTTCAGTTGCATA GATAGATCCTGTAAA TERM 4862 3896321 - 3896293 - T 95 -14.9 -3.48814 | opp_overlap 3896293 3896298, overlap 3896285 3896287 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC TERM 4863 3896293 - 3896321 + T 88 -14.9 -3.08133 | opp_overlap 3896293 3896285 3896287, overlap 3896298 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC hicB 3896737 - 3896378 - | hypothetical protein yhhJ 3898207 - 3897080 - | putative transporter TERM 4864 3897424 - 3897408 - G 70 -10.1 -3.24232 | overlap 3897406 3897404 GTGGTGGCAAACAGA CTGAGCG CCA CGCCCAG CATAAACAGCGGGAT yhiH 3900888 - 3898204 - | putative ATP-binding component of a transport system, fragment 1 TERM 4865 3899716 - 3899694 - G 85 -11.3 -3.65351 | gap 1, overlap 3899676 3899673 CCACCGCCAGCGAAA GCCGCT-GGC GAAT GCCGAGCGGC AATGACTCCGGCAGA TERM 4866 3900627 - 3900608 - G 74 -2.1 -5.09225 | AGGCGAGCGAAAAAA TCGACGT TTTCAT ACACCGA CAAGGTGTGGTAGAG yhiI 3902003 - 3900936 - | hypothetical protein TERM 4867 3901007 - 3901018 + g 72 -7.2 -4.1964 | GCACCCACGCTACGC CCGG TAAA CCGG TTTTGACATATTCCA TERM 4868 3901668 - 3901708 + g 72 -6.8 -4.17537 | opp_overlap 3901688, overlap 3901652 3901669 3901705 GGCACGAGTTTCGCT TTGCCGTTGCTCCAGC AAAGCCTGC GCGGCAGCAACGGCAC TTTGTGCTTCTTTGA TERM 4869 3901705 - 3901715 + g 72 -6.8 -4.15396 | overlap 3901669 3901668 TGCGCGGCAGCAACG GCAC TTT GTGC TTCTTTGATTTGCGC TERM 4870 3902052 - 3902072 + r 74 -11.1 -2.80344 | opp_overlap 3902050 3902049, overlap 3902051 CGCGTGTTACAACTG CCGCCGAAC GAC GTTCAGCGG ATTCTTCCATCCGGG TERM 4871 3902270 - 3902247 - R 70 -5.3 -4.37658 | opp_overlap 3902247 3902267 AACTGGCTGACAAAA CGGTATCCA TCCTGT TGGATAGCG TTTCACGCCTGTTCA yhiJ 3903991 - 3902369 - | hypothetical protein TERM 4872 3902465 - 3902477 + g 71 -9.1 -3.52918 | AGTGGTTATCTCAGG CCCTG CAC CAGGG TTAATTTGGCAATTA TERM 4873 3902704 - 3902714 + g 78 -5.4 -4.7657 | opp_overlap 3902702 3902704 AGGATCGACAAGAGA TAGC CCG GCTA TTTTTAAACTTTTTG TERM 4874 3904189 - 3904153 - R 75 -9.6 -3.60074 | opp_overlap 3904155 GAGAAAGTCCCTAAA GATTGTAGAGGCGT CATCAGAAC ATGCCTCTACAATC GATTAAGAAAACCTA yhiL 3905860 - 3904253 - | hypothetical protein TERM 4875 3905027 - 3905051 + g 91 -8.1 -5.08178 | opp_overlap 3905030 CATGTCTCTCGTATT TAATAAATTGT AGA GCAATTTATTA TTTTTATGTATGTAT yhiM 3906269 - 3907243 + | hypothetical protein TERM 4876 3907291 - 3907264 - T 75 -6.4 -4.40358 | gap 1, opp_overlap 3907264 ACGTACCGGATAAAA CCAGCGTTGAC CATTTGC GT-AACGCTGG TTTTTCTTAGGCATC TERM 4877 3907264 - 3907291 + T 83 -6.4 -5.07486 | gap 1, opp_overlap 3907264 ACGTACCGGATAAAA CCAGCGTTGAC CATTTGC GT-AACGCTGG TTTTTCTTAGGCATC yhiN 3908761 - 3907559 - | hypothetical protein TERM 4878 3909612 - 3909593 - g 70 -4.2 -4.65933 | overlap 3909589 GAGCGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACACGTAT pitA 3908993 - 3910492 + | low-affinity phosphate transport TERM 4879 3910684 - 3910705 + T 100 -13.7 -5.66684 | TGTAATCAGTCTCGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTTA yhiO 3911071 - 3910736 - | universal stress protein UspB uspA 3911462 - 3911896 + | universal stress protein TERM 4880 3911923 - 3911940 + F 100 -14.1 -4.77757 | CGACGTGTTCCTGAA CGCCCGC ATAT GCGGGCG TTTTGCTTTTTGGCG TERM 4881 3913280 - 3913290 + G 70 -4.6 -4.56597 | TCGGCATGTTTATGT GCTC ACT GGGC TTTTTGACGGCGGCA yhiP 3912214 - 3913683 + | inner membrane transporter YhiP TERM 4882 3913699 - 3913724 + T 100 -19.1 -4.19735 | opp_overlap 3913699 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACGG TERM 4883 3913724 - 3913699 - T 100 -19.1 -3.86346 | opp_overlap 3913699 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACGG yhiQ 3914484 - 3913732 - | putative methyltransferase TERM 4884 3914343 - 3914320 - G 70 -4.6 -4.49531 | gap 1 AACAAAATCAACAAA GATGCCGCCAA GTT TTGGCT-CATC ACGCTTGCGCAATTC TERM 4885 3914438 - 3914459 + g 88 -11.5 -3.794 | opp_overlap 3914440, overlap 3914440 GCCGCCAGAACAGAT AAGGCGCCG TCTC CGGCGCCTG TTTCATCAATTAAGC TERM 4886 3914440 - 3914457 + g 95 -14.1 -3.48105 | opp_overlap 3914440, overlap 3914438 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA TERM 4887 3914457 - 3914440 - G 100 -14.1 -3.72788 | opp_overlap 3914440 3914438 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA prlC 3916534 - 3914492 - | oligopeptidase A TERM 4888 3914576 - 3914598 + g 74 -10.6 -3.21276 | opp_overlap 3914565, overlap 3914575 CAGATCCATCGGCTC TTCTGAACCG CCA CGGCTCAGAA TGTTGTCGAGGAACG TERM 4889 3915655 - 3915665 + g 70 -4.6 -4.46581 | opp_overlap 3915649, overlap 3915649 TTAAGAAATCCAGCA CCTG CTG CGGG TTTTCTGCCATTTTA TERM 4890 3916690 - 3916709 + H 76 -4.8 -4.8622 | overlap 3916691 CTGATACGCTTTTGT GCGCCCCG AATA CGGGCCGA TTTTTACTTACCGGA TERM 4891 3917178 - 3917160 - g 70 -4.4 -4.56597 | opp_overlap 3917150 GCGCGCGTCGAAAAA GCCGACGG TTT CCAGCAGC TTAAGGCCAAACTTC TERM 4892 3917262 - 3917248 - g 75 -5.6 -4.58773 | CGTATGAAATGAAAA CCGACT ATC AGGCGG TGGTCAGCGGGATAG yhiR 3916737 - 3917579 + | hypothetical protein gor 3917651 - 3919003 + | glutathione reductase TERM 4893 3919012 - 3919038 + F 100 -16 -3.43217 | opp_overlap 3919012, overlap 3919005 GCGCTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG TERM 4894 3919038 - 3919012 - f 100 -13.8 -3.71649 | opp_overlap 3919005 3919012 GCGCTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG TERM 4895 3919499 - 3919467 - f 100 -16.6 -3.03243 | opp_overlap 3919476, overlap 3919476 ACTCAGGGCTGAAGA GTAAAAAAACCGAC GCAAA GTCGGTTTTTTTAC ATCCGGATTCGGACA TERM 4896 3919476 - 3919490 + F 91 -7.1 -5.47218 | opp_overlap 3919467 3919476 TGAAGAGTAAAAAAA CCGAC GCAAA GTCGG TTTTTTTACATCCGG TERM 4897 3919490 - 3919476 - f 93 -7.1 -5.63374 | opp_overlap 3919476, overlap 3919467 TGAAGAGTAAAAAAA CCGAC GCAAA GTCGG TTTTTTTACATCCGG TERM 4898 3919729 - 3919698 - f 70 -9.7 -3.0464 | gap 1, opp_overlap 3919706, overlap 3919706 AACTCAGGCTGAAGA GTAAAAAA-CCGAC GCAAA GTCGGTTTTTTTAC GTCCTGATTCAAACC TERM 4899 3919720 - 3919706 - f 90 -7.1 -5.27779 | opp_overlap 3919706, overlap 3919698 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG TERM 4900 3919706 - 3919720 + F 91 -7.1 -5.48825 | opp_overlap 3919706 3919698 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG arsR 3919880 - 3920233 + | DNA-binding transcriptional repressor ArsR TERM 4901 3920493 - 3920508 + G 90 -6.8 -5.08824 | TATCATCAGCCTGCT GCTGGA TGAG TCCGGC TTTTTTGAATGGGCG arsB 3920266 - 3921576 + | arsenical pump membrane protein arsC 3921589 - 3922014 + | arsenate reductase SSON_3739 3922444 - 3922148 - | hypothetical protein TERM 4902 3923758 - 3923738 - g 77 -9.7 -3.59979 | overlap 3923742 3923752 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 4903 3923754 - 3923742 - g 75 -6.9 -4.44046 | overlap 3923738 3923752 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_3740 3922916 - 3924088 + | IS21 ORF1 SSON_3741 3924088 - 3924885 + | IS21 ORF2 SSON_3742 3924972 - 3925340 + | IS2 ORF2 TERM 4904 3925565 - 3925545 - T 87 -9.7 -4.31397 | ACTTTCAGAAAATAA CCCCAGG GTAATCA CCTGGGG AAGGAACACAGTGTT SSON_3743 3926579 - 3925632 - | hypothetical protein TERM 4905 3927041 - 3927017 - R 100 -12.9 -5.35721 | ATATAATAACAAAAA TCCTCCAGCCT TGT AGGCCAGAGGA TAAAATACTTAATTG SSON_3744 3928271 - 3927087 - | putative integrase TERM 4906 3927307 - 3927327 + g 80 -11.3 -3.35298 | opp_overlap 3927311, overlap 3927311 AGTCTTCCCTTATAT CCAAGTAAT TCA ATTACTTGG TTAATGCTTTCCTTA TERM 4907 3927993 - 3928003 + g 100 -3.2 -5.61689 | ATTTTTCAGACTCAT TTGC TGC GCGA TTTTTTCTTCCTTTT TERM 4908 3930156 - 3930143 - g 78 -5.2 -4.83615 | overlap 3930151 GATGCGGCAGAAAAA GCGC AGAACA GCGC CACGGTGATGCTGCC yicJ 3928958 - 3930181 + | putative permease SSON_3747 3930409 - 3930912 + | IS1 ORF TERM 4909 3932355 - 3932330 - f 72 -9.1 -3.61398 | opp_overlap 3932330 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 4910 3932330 - 3932355 + F 100 -9.8 -5.61596 | opp_overlap 3932330 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_3749 3932345 - 3933691 + | IS4 orf TERM 4911 3933702 - 3933673 - T 89 -9.3 -4.59109 | overlap 3933675 3933696 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCCAGGTCTGG TERM 4912 3933700 - 3933675 - T 100 -16.3 -3.90762 | overlap 3933673 3933696 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCCAGGTCT TERM 4913 3934924 - 3934896 - T 100 -14.5 -3.69283 | opp_overlap 3934894 3934893, overlap 3934897 TAATCTATTGAAGAA TGCCGGGTACGTC TGA GTCGTACCCGGCG AGATTGATGTTTACT TERM 4914 3934923 - 3934897 - T 100 -18 -2.81088 | opp_overlap 3934894 3934893, overlap 3934896 AATCTATTGAAGAAT GCCGGGTACGTC TGA GTCGTACCCGGC GAGATTGATGTTTAC yicH 3936644 - 3934935 - | hypothetical protein TERM 4915 3936598 - 3936577 - G 71 -2.9 -4.77165 | GTTTGCAGAAGAAAA TAGAGGCCA GCGA TCGCCACTA ACAGAGCGATGAGAA TERM 4916 3936731 - 3936760 + r 81 -13 -2.63644 | gap 1, overlap 3936728 3936727 3936758 GTTAAAGAGGTGAGA CT-GCGGCGGTAA TTATC TTACCGCCGCCAG TGAATTACTGTTTTT TERM 4917 3936758 - 3936770 + r 73 -4.1 -4.91109 | opp_overlap 3936768, overlap 3936731 3936728 3936727 TTATCTTACCGCCGC CAGTG AAT TACTG TTTTTCTGGTGGGAA yicE 3938156 - 3936765 - | putative transport protein TERM 4918 3936888 - 3936875 - G 72 -6.7 -4.24002 | overlap 3936878 GGGCAAACTGCAAAA TCAGC GGCT GCTGA GACACGCCCAGACCA TERM 4919 3937223 - 3937235 + g 76 -9.1 -3.83026 | overlap 3937205 CGTTTGCCAGCACGC CGCCT TTC AGGCG TTTCATGTACAGCGG TERM 4920 3938110 - 3938127 + g 90 -9.9 -4.42386 | TCGCTGTTTTGAGTC TGCGCAA CCGG TTGCGCA TTTTCTGACTCGAGG TERM 4921 3938222 - 3938211 - H 73 -4.4 -4.80455 | GACCGAAAGAGAAAA GCAA ACGT TTGC CACATCCTCATCTAA TERM 4922 3938772 - 3938762 - g 72 -6.8 -4.18018 | opp_overlap 3938762 GTTGGTGATGCAAAA TGCC ATT GGCA TTGGTATGGCTAGCC gltS 3938436 - 3939641 + | glutamate transport TERM 4923 3939671 - 3939650 - T 77 -11.5 -3.21912 | CGGTTAACCGATGAA GCGGCGGTA GAAG TGCCGCCGC AACAAAGACAAATGC TERM 4924 3939710 - 3939684 - T 72 -5.8 -4.46072 | overlap 3939685 CGCAACAAAGACAAA TGCCTGATACGC TTC GCTTATCAAGCC TGCGTATTGATTCAT recG 3941891 - 3939810 - | ATP-dependent DNA helicase RecG TERM 4925 3940074 - 3940093 + g 90 -10 -4.4009 | overlap 3940064 TTGCAGGCGAATTTG CGCCGTTT TAGA AAGCGGCG TTTTGTAGAGTAGCA spoU 3942586 - 3941897 - | tRNA guanosine-2'-O-methyltransferase spoT 3944701 - 3942593 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 4926 3944145 - 3944163 + g 70 -5.2 -4.371 | opp_overlap 3944145, overlap 3944139 TACAGCGCCTCAAAA CCCAGCTC TTC GAGTTCGG TTTTAATGTGGTGGA rpoZ 3944995 - 3944720 - | DNA-directed RNA polymerase subunit omega gmk 3945673 - 3945050 - | guanylate kinase TERM 4927 3945618 - 3945606 - G 82 -9.1 -4.15044 | opp_overlap 3945602 3945606 TGGGTTTTTAATAAA GCCTG AAT CAGGC TGGATTTACCCGCAC SSON_3758 3945807 - 3946070 + | hypothetical protein TERM 4928 3946552 - 3946588 + GT 79 -4.4 -4.9725 | gap 2, overlap 3946553 GCTGGCCTGATGATG C-GCCAG-GGGAATAGCG ACA CGCTAAACTCACTGGCTG TTTTTGTCTGGGCAT TERM 4929 3946553 - 3946586 + GT 76 -8.1 -4.11141 | gap 1, overlap 3946552 CTGGCCTGATGATGC GCCAG-GGGAATAGCG ACA CGCTAAACTCACTGGC TGTTTTTGTCTGGGC TERM 4930 3947590 - 3947565 - gT 95 -11.9 -3.89354 | TGCGCAAATCAAGAA GCTGGGCAG TTGGCTGG CTGCCCAGC AGATCACAGGTTTTG ligB 3945925 - 3947613 + | NAD-dependent DNA ligase LigB yicG 3948281 - 3947610 - | hypothetical protein dinD 3949343 - 3948519 - | DNA-damage-inducible protein D TERM 4931 3948956 - 3948944 - G 75 -4.8 -4.83615 | opp_overlap 3948950 CATTTCTCAGAAAAA GACG CTTTT CGTC TTCACGAAGTTGCCT TERM 4932 3949527 - 3949503 - R 76 -4.2 -5.06414 | opp_overlap 3949503 TGCGGGGAAGAAAAA TGCCGCTC TGTTTGAGT GGGCGGCA TTTGTGAAGGCTGAA yicC 3950428 - 3949565 - | hypothetical protein TERM 4933 3949814 - 3949835 + g 70 -5.9 -4.19506 | gap 1, opp_overlap 3949817, overlap 3949820 3949821 TTGTGCCAGCAGAAC CAACT-CCTG CTC CAGGCGGTTG TTTTCCAGTTGCACT rph 3950555 - 3951271 + | ribonuclease PH TERM 4934 3951279 - 3951296 + F 100 -11.3 -6.06529 | CAAACTGATTTTTAA GGCGACT GATG AGTCGCC TTTTTTTTGTCTGTA TERM 4935 3951468 - 3951488 + G 75 -5.3 -4.62069 | opp_overlap 3951461 GTTTAATACCGGGCG CGACCTGGC ACT GTTAGGCCG TTTTTACGCTGAAGC pyrE 3951337 - 3951978 + | orotate phosphoribosyltransferase TERM 4936 3952011 - 3951984 - T 90 -9.8 -4.41348 | opp_overlap 3951983 3951981 3951986, overlap 3951985 3951986 TGGCGTTTAAAGAAA CTCGCCGGATGA AAAG TCATCCGGCGTC ATATTACTGCAACTG TERM 4937 3952010 - 3951985 - T 83 -13.3 -3.24488 | opp_overlap 3951983 3951981 3951986, overlap 3951984 3951986 GGCGTTTAAAGAAAC TCGCCGGATGA AAAG TCATCCGGCGT CATATTACTGCAACT TERM 4938 3952009 - 3951986 - T 95 -16.8 -2.54371 | opp_overlap 3951983 3951981 3951986, overlap 3951985 3951984 GCGTTTAAAGAAACT CGCCGGATGA AAAG TCATCCGGCG TCATATTACTGCAAC TERM 4939 3951986 - 3952009 + T 100 -16.8 -2.77523 | opp_overlap 3951986 3951985 3951984, overlap 3951983 3951981 GCGTTTAAAGAAACT CGCCGGATGA AAAG TCATCCGGCG TCATATTACTGCAAC slmA 3952611 - 3952015 - | nucleoid occlusion protein TERM 4940 3952665 - 3952685 + r 76 -11.9 -2.50817 | overlap 3952664 3952662 3952660 GCACCCACGCTATGA CCGCAAACG AAA TGTTTGCGG CTATGTTATGACGTT dut 3953173 - 3952718 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 4941 3952844 - 3952816 - G 77 -3 -5.08601 | opp_overlap 3952820, overlap 3952817 3952820 CTACCGGAACAAAAA TCATCTGGGCGA TGCGT TCGCCAGGTTGA ATGGTGAAGCTGTCC dfp 3954374 - 3953154 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase SSON_3769 3954971 - 3955474 + | IS1 ORF TERM 4942 3956004 - 3956017 + F 72 -6.7 -4.2074 | overlap 3956001 TAACCCGCTATGCGC GATCC TTCG GGATC TTTGTCTGTTCGGGA rpmB 3956208 - 3956444 + | 50S ribosomal protein L28 TERM 4943 3956588 - 3956564 - g 70 -3.6 -4.62872 | gap 1, opp_overlap 3956564 ACTAAGCCGGAAAAA CTGGAACTGAA AAAA TTC-GATCCAG TTGTTCGCCAGCACG rpmG 3956465 - 3956632 + | 50S ribosomal protein L33 TERM 4944 3956647 - 3956682 + F 100 -18.6 -2.90194 | opp_overlap 3956650 3956657, overlap 3956650 3956657 ATTCTCGCTTTGATG TAACAAAAAACCTCGC TCCG GCGGGGTTTTTTGTTA TCTGCTTGCCCCCAT TERM 4945 3956650 - 3956679 + F 100 -15.9 -3.59946 | opp_overlap 3956650 3956657, overlap 3956647 3956657 CTCGCTTTGATGTAA CAAAAAACCTCGC TCCG GCGGGGTTTTTTG TTATCTGCTTGCCCC TERM 4946 3956679 - 3956650 - f 85 -13.7 -3.05384 | opp_overlap 3956647 3956650 3956657, overlap 3956657 CTCGCTTTGATGTAA CAAAAAACCTCGC TCCG GCGGGGTTTTTTG TTATCTGCTTGCCCC TERM 4947 3956672 - 3956657 - f 88 -6 -5.4833 | opp_overlap 3956650 3956647 3956657, overlap 3956650 TGATGTAACAAAAAA CCTCGC TCCG GCGGGG TTTTTTGTTATCTGC TERM 4948 3956657 - 3956672 + F 100 -8.2 -5.60689 | opp_overlap 3956657 3956650, overlap 3956650 3956647 TGATGTAACAAAAAA CCTCGC TCCG GCGGGG TTTTTTGTTATCTGC mutM 3956730 - 3957539 + | formamidopyrimidine-DNA glycosylase coaD 3958057 - 3957578 - | phosphopantetheine adenylyltransferase kdtA 3959342 - 3958065 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 4949 3958195 - 3958205 + g 70 -6.8 -4.08945 | opp_overlap 3958195 GCGTCGGTGAGTAAA GAGG AAA CCTC TTTTGCAAGCGTAGT TERM 4950 3958721 - 3958746 + g 75 -5.3 -4.61482 | overlap 3958722 CAGAAATATCGAATT TCAGGCTACCG GTAA CGGTTACCTGG TTATTTTTTGCGCCC waaQ 3959755 - 3960813 + | lipopolysaccharide core biosynthesis protein waaG 3960810 - 3961934 + | LPS alpha1,3-glucosyltransferase TERM 4951 3961994 - 3962008 + G 73 -4.2 -4.7373 | TTGAGGAAGTTAAAA CCTTGC AGG GTGAGG TTTTTCGTGAACTGG TERM 4952 3962529 - 3962551 + G 77 -2.7 -5.05606 | CGTTCCACGTCGTTG GCGCGATAA AGATC TTATTGGGC TTTATTTTTCTTCGA waaP 3961927 - 3962724 + | lipopolysaccharide core biosynthesis protein TERM 4953 3963713 - 3963731 + G 84 -4 -5.27938 | opp_overlap 3963725, overlap 3963720 3963724 AACCAATTAACGGGA TAATGAAT TAT ATTTATTA TTTTTATTTAAAGAT waaI 3962740 - 3963756 + | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase waaJ 3963773 - 3964768 + | lipopolysaccharide 1,2-glucosyltransferase waaY 3964778 - 3965470 + | lipopolysaccharide core biosynthesis protein TERM 4954 3965575 - 3965594 + G 90 -5 -5.33405 | overlap 3965576 GTGTGTTAAATATCG CTTACGGT ATTG ACCGTAAC TTTTTATTTGGTGCG TERM 4955 3965576 - 3965593 + G 72 -8.5 -3.78958 | overlap 3965575 TGTGTTAAATATCGC TTACGGT ATTG ACCGTAA CTTTTTATTTGGTGC TERM 4956 3965997 - 3965982 - g 78 -5.4 -4.7497 | gap 1 TTTATGCAGGAAAAA CCAG-CG AAG CGTCTGG CTATAGAGGGACTTC TERM 4957 3966141 - 3966161 + G 74 -7.7 -4.05529 | TATAAATGCCTTGAT CAGGATATT TTA AATATTCTG TTCTTTGGTCATTGT waaW 3965496 - 3966521 + | UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase waaV 3966606 - 3967589 + | putative beta1,3-glucosyltransferase waaL 3967635 - 3968888 + | lipid A-core, surface polymer ligase TERM 4958 3968894 - 3968935 + T 76 -9 -3.68024 | opp_overlap 3968895 3968902 3968907, overlap 3968895 3968902 3968907 AGATAAATAATGAAT ATGTGAAATAAAATCAGC AAGGAG GCTGATTTTATTTCAAAA TTATCTATTAAGGGG TERM 4959 3968895 - 3968934 + T 79 -12.5 -2.80493 | opp_overlap 3968895 3968902 3968907, overlap 3968894 3968902 3968907 GATAAATAATGAATA TGTGAAATAAAATCAGC AAGGAG GCTGATTTTATTTCAAA ATTATCTATTAAGGG TERM 4960 3968934 - 3968895 - T 85 -12.5 -3.39742 | opp_overlap 3968894 3968895 3968902 3968907, overlap 3968902 3968907 GATAAATAATGAATA TGTGAAATAAAATCAGC AAGGAG GCTGATTTTATTTCAAA ATTATCTATTAAGGG TERM 4961 3968902 - 3968927 + T 72 -9.2 -3.63305 | opp_overlap 3968895 3968902 3968907, overlap 3968895 3968894 3968907 AATGAATATGTGAAA TAAAATCAGC AAGGAG GCTGATTTTA TTTCAAAATTATCTA TERM 4962 3968927 - 3968902 - T 76 -9.2 -3.67918 | opp_overlap 3968902 3968895 3968894 3968907, overlap 3968895 3968907 AATGAATATGTGAAA TAAAATCAGC AAGGAG GCTGATTTTA TTTCAAAATTATCTA TERM 4963 3968922 - 3968907 - T 76 -4.7 -4.89521 | opp_overlap 3968902 3968895 3968894 3968907, overlap 3968902 3968895 ATATGTGAAATAAAA TCAGC AAGGAG GCTGA TTTTATTTCAAAATT TERM 4964 3968907 - 3968922 + T 76 -4.7 -4.88405 | opp_overlap 3968907 3968902 3968895, overlap 3968902 3968895 3968894 ATATGTGAAATAAAA TCAGC AAGGAG GCTGA TTTTATTTCAAAATT rfaC 3969929 - 3968958 - | ADP-heptose:LPS heptosyl transferase I TERM 4965 3969693 - 3969713 + g 70 -5.3 -4.36914 | overlap 3969686 3969694 TGCTTGTAGCGCTTC ACGAAACGC TTT GCGTTCCGC TTTTATGGGGGCCGA rfaF 3970979 - 3969933 - | ADP-heptose:LPS heptosyltransferase II TERM 4966 3970878 - 3970851 - G 76 -9.2 -3.7941 | gap 1, opp_overlap 3970851 3970866 CATCCGCGATAATAA TG-GACGGCACCA TGC CGGTGCCATCACA TCGATTATCGCCTGG rfaD 3971921 - 3970989 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 4967 3971328 - 3971340 + g 73 -9.1 -3.65522 | opp_overlap 3971288 3971325 ACCTTCAAACAGCTT CGGTG ATT CACCG TTGTTAAGCTGGGTG TERM 4968 3971500 - 3971516 + g 81 -6.5 -4.77036 | opp_overlap 3971500 AGGAATTTTGAGTAA CCGTAGA CGT TCAACGG TTTTTCGTACTCGCG kbl 3972135 - 3973331 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 4969 3973518 - 3973501 - g 74 -2.7 -5.00884 | AGTGGTCGCAAAAAA CCATC CCGGTGCC GATGG TCGTGGGCCATGAAT tdh 3973341 - 3974366 + | L-threonine 3-dehydrogenase TERM 4970 3974376 - 3974393 + T 95 -12.7 -4.18494 | opp_overlap 3974376 GATTAACACGAACAA GGGCTGG TATT CCAGCCC TTTTGCCTGAGGATA TERM 4971 3974393 - 3974376 - T 93 -12.7 -3.83155 | opp_overlap 3974376 GATTAACACGAACAA GGGCTGG TATT CCAGCCC TTTTGCCTGAGGATA SSON_3790 3976021 - 3975518 - | IS1 ORF yibQ 3977236 - 3976403 - | hypothetical protein TERM 4972 3977230 - 3977240 + g 77 -6.8 -4.56133 | TAGCGGAAGGCATCG CCAG CAC CTGG TTTTCGTTGTTCGGG yibP 3978649 - 3977366 - | hypothetical protein TERM 4973 3978042 - 3978060 + g 78 -8.9 -4.27474 | overlap 3978027 TTCGCCTGTTGGGCG CGCTGTT CATAT AACAGCG TTTGTTGCTCGCTTT TERM 4974 3978257 - 3978295 + g 75 -5 -4.77036 | overlap 3978259 3978287 GCCCTGACGGAATGC GGCATCCAGTTGTGCGGC GAG GCTGCGCTCCTGGGCGGC TTTTTGCTGCTCCAG TERM 4975 3978588 - 3978539 - G 81 -9.3 -4.07568 | gap 1, opp_overlap 3978541, overlap 3978551 CGCGTGGGCGGAAAA GGCGCACAACAATACGCCAGCGCT AAG AACGCTGGCGTAG-ATGATGGGCC TGATTGCAAACCTGC TERM 4976 3978577 - 3978551 - G 100 -17.4 -3.81022 | opp_overlap 3978541, overlap 3978539 AAAGGCGCACAACAA TACGCCAGCGCT AAG AACGCTGGCGTA GATGATGGGCCTGAT yibO 3980203 - 3978659 - | phosphoglyceromutase yibN 3980448 - 3980879 + | hypothetical protein grxC 3981021 - 3981272 + | glutaredoxin 3 secB 3981335 - 3981802 + | preprotein translocase subunit SecB TERM 4977 3981804 - 3981788 - f 86 -10.9 -3.69283 | overlap 3981780 GAAGGTACTGAAGAA CATCAGG ATG CCTGATG AACCAACGTAATGCT TERM 4978 3981908 - 3981882 - g 78 -8.7 -4.1552 | gap 1 TACCCTGGCAAGAAA TGGCCAC-GAGG TTGT CCTCTGGGGCCA TGACCCTGAACATAT gpsA 3981802 - 3982821 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 4979 3982847 - 3982876 + F 82 -11.5 -3.56987 | gap 1, overlap 3982851 CCTTTGTTACCGCTA TGACCCGGCCCG CGCAGAA CGGGCCGG-TCA TTATCTCATCGTGTG TERM 4980 3982851 - 3982873 + F 82 -13.4 -2.90888 | overlap 3982847 TGTTACCGCTATGAC CCGGCCCG CGCAGAA CGGGCCGG TCATTATCTCATCGT TERM 4981 3983385 - 3983349 - g 70 -3.6 -4.7254 | opp_overlap 3983350 3983371, overlap 3983350 ACCCGGCAGCAAAAA TTGGCCGTGGCATTAT GCTCG ACCACGCCACGGGCAT CGTTGTGGGTGAAAC cysE 3982901 - 3983722 + | serine acetyltransferase yibK 3984248 - 3983775 - | putative tRNA/rRNA methyltransferase YibK TERM 4982 3984272 - 3984250 - R 77 -12 -2.79302 | opp_overlap 3984239 ACGATGTTTAGCATA CTGCCCCC TTAGTGC GGGGGCAG GATAGCAGAAAATTG lldD 3985634 - 3984444 - | L-lactate dehydrogenase TERM 4983 3985518 - 3985536 + g 72 -11 -3.05343 | overlap 3985520 TTCTGACAAATCTTC CACGTTGC GGC GCAGCGTG TATTCAGAATATGCA lldR 3986407 - 3985631 - | DNA-binding transcriptional repressor LldR TERM 4984 3985849 - 3985837 - G 80 -5.5 -5.02074 | TCAGTTGTGAAAAAA CCGGT GGC ACCAG ATACATCCGCTGACG lldP 3988062 - 3986407 - | L-lactate permease TERM 4985 3988308 - 3988333 + r 79 -11.9 -3.28745 | opp_overlap 3988308, overlap 3988303 GTCTGGTAAAGAAAA GGGCAATCCTC ATCA GAGAATTGCCC TTAGATTGTTGACCC TERM 4986 3988333 - 3988308 - R 100 -14.1 -4.86731 | opp_overlap 3988308 3988303 GTCTGGTAAAGAAAA GGGCAATCCTC ATCA GAGAATTGCCC TTAGATTGTTGACCC TERM 4987 3988362 - 3988390 + r 100 -17.6 -3.71917 | CCGGGGCGCCTTATC TTGCCTGATGCG CGTAA CGCATCAGGCAA TTTGGCGTTTGCCCT SSON_3803 3993280 - 3988430 - | putative adhesin TERM 4988 3988982 - 3988994 + g 71 -2.7 -4.75472 | GTTAGTAGAAGAACC TACAG AGA TTGTA TTTTCTTCCTCTGCA SSON_3804 3993662 - 3993324 - | hypothetical protein yibL 3994907 - 3994545 - | hypothetical protein SSON_3806 3995192 - 3995401 + | putative cytoplasmic protein TERM 4989 3995398 - 3995416 + T 76 -8.2 -4.10855 | GCAGGTAGAGGGGCA GTAAGCAG ACG TTGCTTAC TTTTGAAAGGCTTTT mtlR 3996000 - 3995413 - | mannitol repressor protein TERM 4990 3995572 - 3995545 - G 82 -12 -3.53012 | gap 1, overlap 3995546 GTCTGCTGGTTCAAA CTGTGGCGGCGGT GGT AACGCCGCCAC-G CAGTGCAGTTCACCA TERM 4991 3995572 - 3995546 - G 77 -12.2 -2.71712 | overlap 3995545 TCTGCTGGTTCAAAC TGTGGCGGCGGT GGT AACGCCGCCACG CAGTGCAGTTCACCA mtlD 3997148 - 3996000 - | mannitol-1-phosphate 5-dehydrogenase TERM 4992 3996765 - 3996783 + g 81 -9.6 -4.07885 | ATGGCCTTTCAGCTG CGTGGTAC CGC GTACCATG TTTTCACAGGCGATG TERM 4993 3997231 - 3997212 - R 93 -13.6 -3.64703 | opp_overlap 3997230, overlap 3997229 TTTCCCTCACCCAAA CCCTCTCC GTGA GGAGAGGG GCAGCGCCGGATGCG TERM 4994 3997337 - 3997376 + r 73 -10 -3.34344 | opp_overlap 3997342 3997343, overlap 3997342 GTAGCGCATCAGGCA ATTAACCCCACCTTCTCC ATGT GGAGAGGGTGGGATTGGA TTACTTACGACCTGC TERM 4995 3997371 - 3997342 - R 93 -14.3 -3.38316 | opp_overlap 3997337 3997342, overlap 3997343 GCATCAGGCAATTAA CCCCACCTTCTCC ATGT GGAGAGGGTGGGA TTGGATTACTTACGA TERM 4996 3997342 - 3997371 + r 90 -14.3 -3.23899 | opp_overlap 3997342 3997343, overlap 3997337 GCATCAGGCAATTAA CCCCACCTTCTCC ATGT GGAGAGGGTGGGA TTGGATTACTTACGA TERM 4997 3997370 - 3997343 - R 90 -15.6 -2.62668 | opp_overlap 3997342 3997337, overlap 3997342 CATCAGGCAATTAAC CCCACCTTCTCC ATGT GGAGAGGGTGGG ATTGGATTACTTACG mtlA 3999290 - 3997377 - | PTS system, mannitol-specific enzyme IIABC components TERM 4998 3997647 - 3997670 + g 75 -5.2 -4.59773 | opp_overlap 3997647 TGGCACCGCGATAGA CTCACCCAGA TAAG TCGGGGTCAG TTTTTCACGATCCAG TERM 4999 3997756 - 3997789 + g 70 -10.4 -3.21276 | overlap 3997754 GCAAAACGAATCGCT TCTTCTTTGGTTGC TGCTTT GCGACCGAGGAAGA TGTTCTCCGCGCCCA TERM 5000 3999551 - 3999566 + H 85 -3.3 -5.50723 | opp_overlap 3999551 AAAATGGCATTTAAA TGTGA GTAGTG TCACA TTTTTGTTTTGATGG yibI 3999827 - 4000189 + | hypothetical protein TERM 5001 4000793 - 4000817 + T 82 -5.8 -5.24531 | gap 1 ACGCAGCCCTTCCGG TGT-TGCCTGA TATT TCAGGCAGGCA TTTTTTCTCAACCGT TERM 5002 4000944 - 4000963 + T 100 -15 -3.76952 | CGTTGCCGTATCAGG CTCCCGGC CATC GCCGGGAG TTTCAGTTGGGTCAG SSON_3811 4002554 - 4001019 - | putative transposase encoded within IS TERM 5003 4002956 - 4002930 - g 74 -7.4 -4.09685 | gap 1 TTTTACCGCGCAAAA GGCAGTGATAG CGATCC CTATCAC-GCC ACAGGTGACGGGAAT TERM 5004 4003493 - 4003473 - g 78 -12.5 -2.91264 | CCGCCCAGGTACATA CGCAGCTGC CTT GCCGCTGCG TCCGGTGATGGTCTT yibH 4002727 - 4003890 + | hypothetical protein TERM 5005 4003954 - 4003969 + T 83 -4 -5.37171 | TTTTTGCATATTACT TCATTG GCTG CGATGA TTTTTCTTTAATATT TERM 5006 4004313 - 4004303 - T 82 -3.2 -5.54192 | ACTAAGTTAAAAAAA CTCC TAG AGAG TGAGTTATTAATATA rhsB 4007824 - 4004876 - | rhsB protein in rhs element TERM 5007 4007682 - 4007660 - G 70 -5.6 -4.34402 | gap 1, opp_overlap 4007671 4007674 4007676 GTGGTTATAGTAAAA CGCC-GATG CCCTGC CATCCGGCG TGGTGATGCGCGTGA SSON_3814 4008175 - 4007849 - | hypothetical protein SSON_3815 4009050 - 4008166 - | hypothetical protein TERM 5008 4008254 - 4008236 - G 75 -6.7 -4.30844 | gap 1, overlap 4008238 AGGGTATCAGGAAAA GC-GGACG GTTC CGTCCCGC CGGAAATGGCCTGCT TERM 5009 4008765 - 4008797 + g 78 -5.4 -4.85599 | gap 1, overlap 4008766 CCGCAGGCATTTTCC AGCCGGGGCCGA-GG CTCT CCATCGGCGCGGGCG TTTTTGTCCGGTAAC TERM 5010 4009308 - 4009321 + G 70 -5.3 -4.35348 | TAGCTACACCAGCCC GTTTG TACG CAAAC TTTCTATTCTGTTGT TERM 5011 4009736 - 4009750 + G 70 -10 -3.1544 | CCGATACGGTCAATC TGGCGA CTA TCGCCA TTGCCTGTGCTGTCG yibF 4009279 - 4009887 + | glutathione S-transferase selA 4009985 - 4011376 + | selenocysteine synthase TERM 5012 4011818 - 4011765 - g 71 -11.2 -2.94322 | gap 2, opp_overlap 4011780, overlap 4011762 4011780 ACGCCAGGTAAAGGA GGTGCTGCGG-GA-ATACGGTTTTGC TGAG GCAAAACTGTTTATCACCGCAGCAAC CGAAGGTCGGGGAAT TERM 5013 4011780 - 4011801 + G 76 -9.5 -3.85698 | opp_overlap 4011765 4011762 4011780 GGTGCTGCGGGAATA CGGTTTTGC TGAG GCAAAACTG TTTATCACCGCAGCA TERM 5014 4012077 - 4012061 - g 76 -7.9 -4.22009 | ACCAGCCAACAGAAA CCGCCCA TGC CGGGCAG CGTATCGCGCTTAAC TERM 5015 4013186 - 4013196 + G 70 -6.8 -4.08557 | overlap 4013160 GAAATGATCATTTAT TGCG CGA CGCA TTATTATTTCCGGAA selB 4011373 - 4013217 + | selenocysteinyl-tRNA-specific translation factor SSON_3819 4013780 - 4013277 - | IS1 ORF TERM 5016 4014491 - 4014474 - g 74 -8.3 -3.86822 | TAACTGCTTTACAAA CCCTCGC TATG GCGCGGG TGCGGCGACGAACCC xylA 4014034 - 4015356 + | xylose isomerase TERM 5017 4015378 - 4015406 + F 100 -9.6 -5.40072 | gap 1, opp_overlap 4015358, overlap 4015379 ACTGTGCAGTCCGTT GGCCCGGTTATCG GTAG CGATA-CCGGGCA TTTTTTTAAGGAACG TERM 5018 4015379 - 4015405 + F 95 -13.1 -3.83561 | gap 1, opp_overlap 4015358, overlap 4015378 CTGTGCAGTCCGTTG GCCCGGTTATCG GTAG CGATA-CCGGGC ATTTTTTTAAGGAAC TERM 5019 4016454 - 4016469 + G 77 -3.2 -5.04868 | opp_overlap 4016454, overlap 4016454 ACACCACACAATAAT CCCC AGGCGAAG GGGG TTTTCTTTGGTTTGA xylB 4015428 - 4016759 + | xylulokinase TERM 5020 4017327 - 4017345 + G 82 -2.4 -5.42131 | CAATGCTTATGAAAT GGTGAT CTACCCC ATCGCC TTTTTTGTCTGCTTG yiaB 4017040 - 4017393 + | hypothetical protein SSON_3823 4018500 - 4017595 - | insertion element IS2 transposase InsD SSON_3824 4018823 - 4018458 - | insertion sequence 2 OrfA protein TERM 5021 4018908 - 4018930 + H 72 -5.7 -4.48072 | gap 1, overlap 4018907 GGAGATTCAGGGGGC CAGTC-TAAC TGGT GTTAGGACTG TTTTCTGCTGCGTCT SSON_3825 4019107 - 4019409 + | IS600 ORF1 SSON_3826 4019550 - 4020263 + | IS600 ORF2 TERM 5022 4020489 - 4020514 + T 75 -6.1 -4.43477 | opp_overlap 4020489 GAATAATTCACGTAA GCCCGGTCA GTCCAATG TGAACGGGC TTTTACTTAACTCAC yiaH 4021516 - 4020521 - | hypothetical protein TERM 5023 4021361 - 4021349 - G 71 -3.3 -4.84363 | GGAAATCATGAAAAA TAGCG GCA CGCTG ACACGAGAGGCAGAA TERM 5024 4021884 - 4021866 - g 77 -3 -5.14563 | overlap 4021868 CCGGCGAGCAAAAAA TCGACGTC ACC GCCTTCGA ACAGTTCCAGGGAAG SSON_3828 4021691 - 4021990 + | putative lipoprotein TERM 5025 4022790 - 4022772 - g 70 -6.7 -4.12254 | gap 1 CAGTACGAGAAAGAA GCG-CAGC AGCT GCTGGCGC TGGAAAATCCGCTGC glyQ 4022085 - 4022996 + | glycyl-tRNA synthetase subunit alpha TERM 5026 4023565 - 4023575 + G 72 -8.2 -3.85698 | CCGATCGCGTGATTC GCGG CCA CCGC TTTATGGGCGAACCG glyS 4023006 - 4025075 + | glycyl-tRNA synthetase subunit beta TERM 5027 4025111 - 4025094 - f 100 -12.7 -4.72272 | opp_overlap 4025094 CGCCGTTATTAAAAA GCCTGCC ATCT GGCAGGC TTTTTTTATTATCGC TERM 5028 4025094 - 4025111 + F 100 -12.7 -5.88565 | opp_overlap 4025094 CGCCGTTATTAAAAA GCCTGCC ATCT GGCAGGC TTTTTTTATTATCGC TERM 5029 4025334 - 4025305 - f 78 -6.5 -4.64844 | gap 1, opp_overlap 4025330, overlap 4025329 4025332 GGCAGACAGAGAAAA GCCCCAC-CTGACT ATA AATCAAAGTGAGGC TACCCTATGCCTGAA yiaZ 4025401 - 4025553 + | small toxic polypeptide TERM 5030 4025562 - 4025581 + T 100 -13.6 -4.1673 | AGAGTAAGAGTCTTT GGCGGGAA GTTA TTCCCGCC TTTCTTACGGCGTTG TERM 5031 4025712 - 4025693 - T 100 -11.4 -6.11392 | opp_overlap 4025691 4025693 4025706 4025710 AAACAAATAAAAAAA TCCCCGCC AAAT GGCAGGGA TCTTAGATTCTGTGC cspA 4025953 - 4025741 - | major cold shock protein TERM 5032 4026207 - 4026188 - R 100 -13.6 -4.08692 | TAATCGGTTGGAAAA CGGTCCTG TCAT CAGGACCG TAAACAGCAATAAAG yiaG 4026524 - 4026234 - | putative transcriptional regulator yiaF 4026838 - 4027668 + | hypothetical protein TERM 5033 4027696 - 4027678 - T 82 -7.4 -4.55446 | opp_overlap 4027678 CAATAAAGAGTAAAA GCCCGA GCGATTA TCGGGC TTTACTTCACGCAGT TERM 5034 4027678 - 4027696 + T 71 -7.4 -3.90291 | opp_overlap 4027678 CAATAAAGAGTAAAA GCCCGA GCGATTA TCGGGC TTTACTTCACGCAGT yiaE 4028692 - 4027718 - | putative dehydrogenase TERM 5035 4028490 - 4028502 + g 74 -3.3 -5.0133 | ATCGTTGATGTGGCA TGCAG TTT CGGCA TTTTTTCCAGCAATG TERM 5036 4028558 - 4028576 + g 70 -3.8 -4.64334 | overlap 4028560 4028562 CAGTAAACCTTCAGC TTCGGCAA AAA TTGCTGCA TTTTGTTCGACGGTT TERM 5037 4028786 - 4028759 - R 100 -14.3 -3.82481 | AGGAAAACTGAAGAA TGCCAGGTGAT TTCTGC ATCACCTGGCA TGAAAGGGATTACAG yiaD 4029455 - 4028796 - | putative outer membrane lipoprotein TERM 5038 4029481 - 4029508 + r 70 -9.2 -3.30124 | gap 1 TAATAACCTTTTTAT TCT-TTGCCACGG GTT CCGTGGCGGGAGA TTATGCCGCGTGAAC SSON_3837 4030287 - 4029574 - | IS600 ORF2 SSON_3838 4030731 - 4030429 - | IS600 ORF1 TERM 5039 4031555 - 4031526 - g 72 -4.3 -4.61231 | gap 1, opp_overlap 4031495 4031548 4031554, overlap 4031527 TGACAGTGGGAAAAA GCTGATCTGCATTG ATC CAATGC-GATCGGA AACCGTCGATTTCTT TERM 5040 4031810 - 4031795 - g 70 -6 -4.18018 | opp_overlap 4031793 4031795 4031796, overlap 4031796 TTGGCGCAGCGAAAA TCCGCC AGCT GGCGGC TATTTTCCACCAAAA TERM 5041 4031844 - 4031826 - g 70 -6 -4.2558 | overlap 4031828 TATTTTCCACCAAAA TACCACCA TGC TGATGGCA GGCTGGGGAATGCAG TERM 5042 4033097 - 4033075 - g 73 -11.3 -2.66695 | overlap 4033074 4033072 GTGCTGACCAAAGAT CTCCCCAGC TCGCG GCTGGGGAA TGGCTGTGCGGGTAA bisC 4030990 - 4033191 + | biotin sulfoxide reductase yiaC 4033600 - 4033160 - | hypothetical protein tag 4034160 - 4033597 - | 3-methyl-adenine DNA glycosylase I TERM 5043 4033989 - 4034004 + g 83 -6.1 -5.00884 | ACTGATGAAAGCAGG CGCGA TAGTTT TCGCG TTTTTTGAGGACGGT TERM 5044 4034726 - 4034756 + G 79 -12.6 -3.06133 | overlap 4034728 ACCGATCCGTTATGG CATGCCAGCGTGAG TAC CTTAGGCTGGCGTG TTGACTCCCGGCTTG yhjY 4034312 - 4035016 + | putative lipase TERM 5045 4035151 - 4035165 + F 78 -6.4 -4.56775 | overlap 4035152 TTCATTCCGTTCTGA TGGCAT TTC ATGCCG TTTTTCCCCAGGCAT yhjX 4035245 - 4036453 + | putative resistance protein TERM 5046 4036538 - 4036555 + F 100 -12.7 -4.88129 | opp_overlap 4036536 4036535 TGACTCGTAAAATTT GGGCCAG TTAA CTGGCCC TTTTTACTGCTTTTT yhjW 4036777 - 4038468 + | phosphoethanolamine transferase TERM 5047 4038665 - 4038647 - f 100 -14.6 -4.25074 | opp_overlap 4038647 GACCAAATTCGAAAA GCCTGCTC AGC GAGCAGGC TTTTTTGCATTTGAA TERM 5048 4038647 - 4038665 + F 100 -14.6 -5.22039 | opp_overlap 4038647 GACCAAATTCGAAAA GCCTGCTC AGC GAGCAGGC TTTTTTGCATTTGAA TERM 5049 4038755 - 4038740 - f 72 -9 -3.55368 | overlap 4038754 AGCGAAGCGAGAGAA CGTTGC GCCA GCAACG GCCCGCAGGGCGAGC TERM 5050 4038772 - 4038754 - f 74 -10.2 -3.14211 | overlap 4038740 ACGTTGCGCCAGCAA CGGCCCGC AGG GCGAGCCA CGAAGTGGCGAGTAA TERM 5051 4038833 - 4038815 - f 100 -14.6 -4.25074 | opp_overlap 4038815 GACCAAATTCGAAAA GCCTGCTC AAC GAGCAGGC TTTTTTGCATTTGTA TERM 5052 4038815 - 4038833 + F 100 -14.6 -5.24449 | opp_overlap 4038815 GACCAAATTCGAAAA GCCTGCTC AAC GAGCAGGC TTTTTTGCATTTGTA TERM 5053 4038923 - 4038908 - f 72 -9 -3.55368 | overlap 4038922 AGCGAAGCGAGAGAA CGTTGC GCCA GCAACG GCCCGCAGGGCGAGC TERM 5054 4038940 - 4038922 - f 74 -10.2 -3.14211 | overlap 4038908 ACGTTGCGCCAGCAA CGGCCCGC AGG GCGAGCCA CGAAGTGGCGAGTAA TERM 5055 4038983 - 4039001 + F 100 -14.6 -5.24449 | opp_overlap 4038983 GACCAAATTCGAAAA GCCTGCTC AAC GAGCAGGC TTTTTTGCATTTGTA TERM 5056 4039001 - 4038983 - f 100 -14.6 -4.25074 | opp_overlap 4038983 GACCAAATTCGAAAA GCCTGCTC AAC GAGCAGGC TTTTTTGCATTTGTA TERM 5057 4040573 - 4040557 - g 81 -9.5 -4.02424 | ATGAAGCAGGATAAA TCCATCA ACC TGATGGA AATGCCGGGGCTGAA dppA 4039717 - 4041324 + | dipeptide transport protein dppB 4041632 - 4042651 + | dipeptide transporter permease DppB dppC 4042661 - 4043563 + | dipeptide transporter TERM 5058 4043673 - 4043624 - g 70 -10.7 -2.83403 | gap 1, overlap 4043601 4043623 TTTCGGCGACGAAAG CGCACCGTTCCGCGCCGTAGACCG CAT CAG-CTACAGCGTAAAACAGGGCG AAGTGGTCGGGATTG dppD 4043574 - 4044557 + | dipeptide transporter ATP-binding subunit TERM 5059 4045470 - 4045518 + G 78 -7.4 -4.32583 | gap 2, overlap 4045467 4045474 GGCGCTTCGGCCCCT GCACCCAGTTG-CAGCCGCAG-CT AAA AGACTACGGCGGTCAACTGGTAGC TTGTTTTGCTGTTGA dppF 4044554 - 4045558 + | dipeptide transporter ATP-binding subunit TERM 5060 4045568 - 4045586 + T 79 -9.5 -3.76402 | opp_overlap 4045568 CGTTAACTCACAAAA CCGGGGC CATGC GCTCCGG TTTACTCAATCAGCT TERM 5061 4045586 - 4045568 - T 77 -7.3 -4.4715 | opp_overlap 4045568 CGTTAACTCACAAAA CCGGGGC CATGC GCTCCGG TTTACTCAATCAGCT yhjV 4046859 - 4045588 - | putative transporter protein TERM 5062 4047268 - 4047227 - R 100 -13.2 -4.60797 | gap 2, opp_overlap 4047229 GCTGGAGAGAGAAAA CCCCCGC-ACGTTG-CAGGT ATGT ACCTGACAACATAACGGGGG CTAATCTTGAACCTA TERM 5063 4047493 - 4047518 + r 100 -14.1 -4.72272 | gap 1 TTTGCGCCCGGACCA GGCCGCAGGAGT GAA ACT-CTGCGGCC TTTTTCGTAAGAAAA TERM 5064 4047547 - 4047535 - R 83 -6.3 -5.06414 | TTTTCGTAAGAAAAA TGCAA CGG TTGCA AGCGGATAATATTCT TERM 5065 4047751 - 4047710 - R 95 -11 -4.60797 | gap 2, overlap 4047746 GCTGGAGAGAGAAAA CCCCCGCA-CGTTG-CAGGT ATGC ACCTGACAACACCACGGGGG CCATTCTTGCATCCA TERM 5066 4047976 - 4048001 + r 100 -14.1 -4.72272 | gap 1 TTTGCGCCCGGACCA GGCCGCAGGAGT GAA ACT-CTGCGGCC TTTTTCGTAAGAAAA TERM 5067 4048030 - 4048018 - R 83 -6.3 -5.06414 | TTTTCGTAAGAAAAA TGCAA CGG TTGCA AGCGGATAATATTCT TERM 5068 4048235 - 4048192 - R 73 -7.5 -4.12532 | gap 2, overlap 4048193 4048229 TGCTGGAGAGAGAAA CCCCCCGCA-CGTTG-CAGGT ATGC ACCTGACAACACCACGGGGGC CATTCTTGCATCCAA TERM 5069 4048234 - 4048193 - R 75 -11 -3.07198 | gap 2, overlap 4048192 4048229 GCTGGAGAGAGAAAC CCCCCGCA-CGTTG-CAGGT ATGC ACCTGACAACACCACGGGGG CCATTCTTGCATCCA TERM 5070 4048459 - 4048484 + r 100 -14 -4.72272 | TTTGCGCCCGGATCA GGCCGCAGGG GTGAAA CTCTGCGGCC TTTTTCGTAAGAAAA TERM 5071 4048513 - 4048501 - R 83 -6.3 -5.06414 | TTTTCGTAAGAAAAA TGCAA CGG TTGCA AGCGGATAATATTCT TERM 5072 4048717 - 4048676 - R 100 -13.2 -4.60797 | gap 2, overlap 4048712 GCTGGAGAGAGAAAA CCCCCGC-ACGTTG-CAGGT ATGC ACCTGACAACATCACGGGGG CCATTCTTGAACCTG TERM 5073 4048942 - 4048967 + r 100 -14.1 -4.72272 | gap 1 TTTGCGCCCGGACCA GGCCGCAGGAGT GAA ACT-CTGCGGCC TTTTTCGTAAGAAAA TERM 5074 4048996 - 4048984 - R 83 -6.3 -5.06414 | TTTTCGTAAGAAAAA TGCAA CGG TTGCA AGCGGATAATATTCT TERM 5075 4049201 - 4049158 - R 73 -7.5 -4.12532 | gap 2, overlap 4049159 4049195 TGCTGGAGAGAGAAA CCCCCCGCA-CGTTG-CAGGT ATGC ACCTGACAACACCACGGGGGC CATTCTTGCATCCAA TERM 5076 4049200 - 4049159 - R 75 -11 -3.07198 | gap 2, overlap 4049158 4049195 GCTGGAGAGAGAAAC CCCCCGCA-CGTTG-CAGGT ATGC ACCTGACAACACCACGGGGG CCATTCTTGCATCCA TERM 5077 4049425 - 4049450 + r 100 -14 -4.72272 | TTTGCGCCCGGATCA GGCCGCAGGG GTGAAA CTCTGCGGCC TTTTTCGTAAGAAAA TERM 5078 4049479 - 4049467 - R 83 -6.3 -5.06414 | TTTTCGTAAGAAAAA TGCAA CGG TTGCA AGCGGATAATATTCT TERM 5079 4049683 - 4049642 - R 100 -13.2 -4.60797 | gap 2, overlap 4049678 GCTGGAGAGAGAAAA CCCCCGC-ACGTTG-CAGGT ATGC ACCTGACAACATCACGGGGG CCATTCTTGAACCTG TERM 5080 4049908 - 4049933 + r 100 -14 -4.72272 | TTTGCGCCCGGACCA GGCCGCAGGG GTGAAA CTCTGCGGCC TTTTTCGTAAGAAAA TERM 5081 4049962 - 4049950 - R 83 -6.3 -5.06414 | TTTTCGTAAGAAAAA TGCAA CGA TTGCA CGCGGATAATATTCT TERM 5082 4050166 - 4050125 - R 100 -13.2 -4.60797 | gap 2, opp_overlap 4050124 GCTGGAGAGAGAAAA CCCCCGC-ACGTTG-CAGGT ATGC ACCTGACAACATCACGGGGG CTAATCTTGAACCCA TERM 5083 4050391 - 4050416 + r 100 -16.2 -4.81685 | TTTGCGCCCGGATCA GGCCGCAGAG GTTAAA CTCTGCGGCC TTTTTCGTGCTTACT yhjU 4052106 - 4050427 - | hypothetical protein TERM 5084 4051129 - 4051115 - G 74 -2.7 -5.00884 | opp_overlap 4051115 ACTTCTTTCAAAAAA CCGCC GAACT GGCCG TTATGTCCCATCATC yhjT 4052291 - 4052103 - | hypothetical protein yhjS 4053862 - 4052291 - | putative protease SSON_3855 4054421 - 4053918 - | IS1 ORF yhjR 4054869 - 4055057 + | hypothetical protein yhjQ 4055093 - 4055821 + | cell division protein TERM 5085 4056037 - 4056055 + F 71 -10.2 -2.64765 | overlap 4056032 ATCAACGCCTCGCGT CCGCGTCC GCT GGACCCGG TCCGTTATCTCATTC TERM 5086 4056122 - 4056110 - f 70 -4.7 -4.42062 | overlap 4056118 CATCGCGCAAAGAAA CGCCG AAA CCGCG CAGGCGGGCATTTTC TERM 5087 4059805 - 4059785 - g 84 -11.1 -3.79519 | AACCTGAGCAGTAAA CAGGAGGCG AAC CGCCTGCTG CTGCGGATTCCGGTA yhjN 4058447 - 4060786 + | cellulose synthase regulator protein TERM 5088 4061734 - 4061722 - g 75 -6.9 -4.36914 | opp_overlap 4061721, overlap 4061723 4061724 GCCCTTTTTACAAAA CCGCG ATG CGCAG GCCGTTCAGCGCCAG yhjM 4060793 - 4061899 + | endo-1,4-D-glucanase TERM 5089 4063210 - 4063189 - f 73 -4.4 -4.8543 | gap 1, opp_overlap 4063189 CAATCGCCAGAAAAA GCTGAAGCG TTTAT CGCCTC-GC TCTCTGCCAGTCAGC yhjK 4065488 - 4067443 + | putative phosphodiesterase TERM 5090 4067481 - 4067502 + F 73 -4.4 -4.7657 | opp_overlap 4067477 4067475 CTTTAAAAAGTGCTG GTTTGTGC GAGCCA GCTCAAAC TTTTTAACCTTTTTG TERM 5091 4067848 - 4067860 + G 74 -7.7 -4.08317 | opp_overlap 4067830 GTCGGTCGTACCGGC GCAGT CGC ACTGC TTTACTTTGAAATTG dctA 4067626 - 4068912 + | C4-dicarboxylate transporter DctA TERM 5092 4068925 - 4068954 + F 72 -9.3 -3.59315 | overlap 4068927 TAATCTCACCACTTA TGCCCGCACTC CCTTCCCC GAGTGCGGGTG TTTGCGCATAATTGA TERM 5093 4068927 - 4068952 + F 82 -11.9 -3.37259 | overlap 4068925 ATCTCACCACTTATG CCCGCACTC CCTTCCCC GAGTGCGGG TGTTTGCGCATAATT TERM 5094 4068978 - 4069006 + F 100 -14 -4.52669 | opp_overlap 4068988 TAATTGACCCCTGTG CCTGAACTTACC ACCTG GGTGAGTTCAGG TTTATTTCACTTCTT TERM 5095 4069079 - 4069096 + F 81 -3.3 -5.4505 | TTAACGTCATTTAGA CTGACTG ACAA CGGGCAG TTTTTTATTACCAGG yhjJ 4069132 - 4070628 + | hypothetical protein TERM 5096 4070675 - 4070706 + T 76 -8 -4.24948 | overlap 4070676 AGGTATTTATGGATG AGCTGGATAGAGGG GTAA CACTTTATCCAGCC TTTTGCATATGCTGC TERM 5097 4070676 - 4070705 + T 77 -11.5 -3.14487 | overlap 4070675 GGTATTTATGGATGA GCTGGATAGAGGG GTAA CACTTTATCCAGC CTTTTGCATATGCTG kdgK 4071872 - 4070724 - | ketodeoxygluconokinase TERM 5098 4070875 - 4070888 + g 82 -3.1 -5.27335 | GAGTCGCCAGCTGCG GTGGT ATCG ATCAC TTTTTCTTTCGGCAG yhjH 4071882 - 4072652 + | EAL domain-containing protein TERM 5099 4072782 - 4072804 + G 72 -7 -4.1899 | overlap 4072774 TTGTTGTTGATTGTC GTGGCGATCA TTT TGATTGCAAC TTTTGACTGGAATCG yhjG 4072707 - 4074782 + | hypothetical protein TERM 5100 4074782 - 4074821 + T 73 -10.2 -2.9916 | gap 1, opp_overlap 4074779 4074789, overlap 4074781 GCAGATGAAGAAGTG ATG-ATAATTGCCGGATGT CTG ACATCCGGCAATTAAACAG ATTTAGATTTTTGGC TERM 5101 4074813 - 4074789 - T 100 -17.3 -3.45434 | opp_overlap 4074782 4074781, overlap 4074779 AAGAAGTGATGATAA TTGCCGGATGT CTG ACATCCGGCAA TTAAACAGATTTAGA yhjE 4076286 - 4074964 - | putative transport protein TERM 5102 4075308 - 4075328 + g 77 -8.3 -4.07568 | CGAACAGGATGATCA GCGTGGTGA TAA TTACCATGC TTTTACGGCGACCAA TERM 5103 4075695 - 4075684 - G 70 -5.8 -4.27117 | CGCCGAGAAGATAAA TGGC ACAC GCCA GCCCCAGCTCATAAA TERM 5104 4076050 - 4076040 - G 75 -4.6 -4.86773 | CAAAATGACCAAAAA CGGC AGA GCCA ATGGGGCGCGCGACG TERM 5105 4076205 - 4076185 - G 79 -9.7 -3.73106 | GTAAAAGTCGAAGAA CTCAATGGC CGT GCCAATGAG AGAGGCGACAAGGAC TERM 5106 4076630 - 4076599 - R 82 -13 -2.78596 | opp_overlap 4076605 4076608 TATGTGCGCATTATA GCCGGATGCGATGC TGGC GCATCTTATCCGGC CTACGGGGAGCCAGG TERM 5107 4076695 - 4076658 - R 71 -10.5 -2.62512 | opp_overlap 4076659 4076662 4076690, overlap 4076657 4076656 4076671 AGGCCGAATAAAATC GTATGCCGGATAAGGCG TTTA CGCCGCATCCGGCCTAT TTTAAGGCTGCGTTT TERM 5108 4076659 - 4076694 + r 95 -11.8 -4.1196 | opp_overlap 4076658 4076657 4076656 4076671, overlap 4076662 4076690 GGCCGAATAAAATCG TATGCCGGATAAGGCG TTTA CGCCGCATCCGGCCTA TTTTAAGGCTGCGTT TERM 5109 4076662 - 4076691 + r 82 -13.5 -2.79004 | opp_overlap 4076658 4076657 4076656 4076671, overlap 4076659 4076690 CGAATAAAATCGTAT GCCGGATAAGGCG TTTA CGCCGCATCCGGC CTATTTTAAGGCTGC yhjD 4077710 - 4076697 - | hypothetical protein yhjC 4078730 - 4077759 - | putative transcriptional regulator LYSR-type TERM 5110 4078622 - 4078588 - G 72 -4.8 -4.62772 | opp_overlap 4078588 4078589, overlap 4078589 4078590 GGCAAAGCAAAGAAA TCCGCCGCGCGGGAAA AAC TTTCCAGCTCCGCGAC TTTGATGAACAACTG yhjB 4079178 - 4079780 + | putative regulator TERM 5111 4079785 - 4079814 + T 89 -9.3 -4.59109 | opp_overlap 4079786 4079787, overlap 4079787 TCTCCTCCTGAAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5112 4079813 - 4079786 - T 85 -12.8 -3.33696 | opp_overlap 4079785 4079787, overlap 4079787 CTCCTCCTGAAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 5113 4079812 - 4079787 - T 90 -16.3 -2.60075 | opp_overlap 4079785 4079787, overlap 4079786 TCCTCCTGAAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 5114 4079787 - 4079812 + T 100 -16.3 -3.90762 | opp_overlap 4079787 4079786, overlap 4079785 TCCTCCTGAAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_3872 4081142 - 4079796 - | IS4 orf TERM 5115 4080754 - 4080793 + g 76 -7.8 -4.25104 | overlap 4080742 AGGGTCAGGCCGCAC CAGTGCGGATGTGGCGTG GCGT TATGCCAGAGCTGCGCTG TTTTCGTGAACACGC TERM 5116 4081157 - 4081132 - G 100 -9.8 -5.61596 | opp_overlap 4081132 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 5117 4081132 - 4081157 + g 73 -9.1 -3.61398 | opp_overlap 4081132 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 5118 4081522 - 4081541 + G 71 -2.9 -4.75404 | gap 1 ATATCTGATGACCCG CTTC-TCC ACGCC GGAAGAAG TTTTTGGTCCCCTTT yieN 4081274 - 4082794 + | regulatory ATPase RavA TERM 5119 4083154 - 4083166 + G 75 -4.8 -4.84017 | AGCACAATAACTTCA GCGT TACAC ACGC TTTTTCTCCAGCGTT yieM 4082788 - 4084239 + | hypothetical protein asnA 4085236 - 4084244 - | asparagine synthetase AsnA TERM 5120 4084927 - 4084982 + g 100 -17.1 -2.75074 | gap 2 ACGGAGAAAGACGGT CTTCATCG-GGGCGAAGGGCT-TTCAT GTGC GTGTACAGCCCTTCGCCCGCGCTGAAG TCGTGTTGCCCTAAG asnC 4085388 - 4085846 + | DNA-binding transcriptional regulator AsnC mioC 4085936 - 4086379 + | flavodoxin gidA 4086758 - 4088647 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 5121 4088686 - 4088659 - f 100 -18.6 -4.77759 | overlap 4088649 4088648 ATAACGCATTAAAAA TGCCTGGTAAGC ACCC GCTTACCAGGCA ACGCATCAAGAACAG gidB 4088711 - 4089334 + | glucose-inhibited division protein B TERM 5122 4089422 - 4089459 + F 86 -5.2 -5.52384 | gap 3, overlap 4089417 CTGGTTACATTTAAC GCCACGTTCACTCTT-TTG TAT CAACAAGA-T-AACGTGGC TTTTTTTGGTAAGCA TERM 5123 4090149 - 4090177 + G 70 -10.9 -2.7264 | opp_overlap 4090146 4090149 4090155, overlap 4090148 4090172 CAGGCGTATACACCA GCGAAAGGCCGGG TGG CCTGGACATTCGC ATTTGGCGAAGCTTT atpI 4089951 - 4090331 + | F0F1 ATP synthase subunit I TERM 5124 4090653 - 4090673 + G 74 -11.1 -3.17051 | overlap 4090651 TGATTGCTCCGCTGG CCCTGACGA TCT TCGTCTGGG TATTCCTGATGAACC atpB 4090340 - 4091155 + | F0F1 ATP synthase subunit A atpE 4091202 - 4091441 + | F0F1 ATP synthase subunit C TERM 5125 4091602 - 4091574 - g 73 -11.8 -2.77899 | gap 1, overlap 4091571 GTTCTGCATGAAGTA CGTATGGCCGCCA TTAA TGGCAGCCAT-CG AAAAACGTCAAAAAG TERM 5126 4091629 - 4091608 - g 70 -3.7 -4.67353 | GCAGCCATCGAAAAA CGTCAAAAA GAAA TTGCTGACG GCCTTGCTTCCGCAG atpF 4091503 - 4091973 + | F0F1 ATP synthase subunit B TERM 5127 4092162 - 4092118 - g 72 -5.1 -4.50686 | gap 3, opp_overlap 4092131 4092154, overlap 4092119 4092154 CCAAAAACGAACAAA TGGCAGAGCTTCTCTCTGGCGC GCTT GCGCCAGA-A-ACGCTC-GCCG AGTCGTTTATCGCAG atpH 4091988 - 4092521 + | F0F1 ATP synthase subunit delta TERM 5128 4093096 - 4093060 - g 78 -8.7 -4.26188 | overlap 4093061 GTCAGACAGGTAAAA CCGCACTGGCTATCGAT GCC ATCATCAACCAGCGCGA TTCCGGTATCAAATG TERM 5129 4093095 - 4093061 - g 70 -10 -3.15231 | overlap 4093060 TCAGACAGGTAAAAC CGCACTGGCTATCGAT GCC ATCATCAACCAGCGCG ATTCCGGTATCAAAT atpA 4092534 - 4094075 + | F0F1 ATP synthase subunit alpha TERM 5130 4094301 - 4094268 - g 100 -14.7 -3.91897 | opp_overlap 4094268 GTCCTTATGCAGAAA CCATGCGCAAAGTGA TTGG TCACCTTGCACACGG TAATCTGGAATATAA atpG 4094126 - 4094989 + | F0F1 ATP synthase subunit gamma TERM 5131 4095249 - 4095226 - g 76 -7.4 -4.18018 | GGTCTGGATGTAAAA GACCTCGAAC ACCC GATCGAAGTC CCGGTAGGTAAAGCG atpD 4095016 - 4096398 + | F0F1 ATP synthase subunit beta atpC 4096419 - 4096838 + | F0F1 ATP synthase subunit epsilon TERM 5132 4096887 - 4096856 - f 73 -10.2 -3.08032 | opp_overlap 4096861, overlap 4096861 CCGGCTTGAAAAGCA CAAAAGCCAGTCTG GAAA CAGGCTGGCTTTTT TTTACGCGTGATCCG TERM 5133 4096861 - 4096882 + F 100 -12.3 -5.76949 | opp_overlap 4096856 4096861 TTGAAAAGCACAAAA GCCAGTCTG GAAA CAGGCTGGC TTTTTTTTACGCGTG TERM 5134 4096882 - 4096861 - f 93 -10.1 -4.67635 | opp_overlap 4096861, overlap 4096856 TTGAAAAGCACAAAA GCCAGTCTG GAAA CAGGCTGGC TTTTTTTTACGCGTG TERM 5135 4097939 - 4097927 - g 84 -7.7 -4.62302 | GAACAGGCTGAAAAA CTGCT GTT AGCAG GCGTTATGCTGCGCG TERM 5136 4097951 - 4097964 + G 70 -5.2 -4.34402 | overlap 4097950 GCAGGCGTTATGCTG CGCG ATCCGG CGCG TTTTGATCTGCGCGG glmU 4097189 - 4098559 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 5137 4099552 - 4099518 - g 93 -6.4 -5.27923 | gap 1, opp_overlap 4099517 4099521, overlap 4099521 GAACGCGATAAAAAA CACCCTTACCG-GGC GCATCA GCCACGGTCAGGTTG ATTTAAGCGAGCTGG glmS 4098721 - 4100550 + | D-fructose-6-phosphate amidotransferase TERM 5138 4100670 - 4100701 + F 100 -9.6 -4.79352 | gap 1, opp_overlap 4100661 4100667 4100670 TGTAAACTGAAATCA GTCCAGTTATGCTGT GAA AAAGCATA-CTGGAC TTTTGTTATGGCTAA TERM 5139 4100701 - 4100670 - f 70 -9.6 -3.00017 | gap 1, opp_overlap 4100670, overlap 4100661 4100667 TGTAAACTGAAATCA GTCCAGTTATGCTGT GAA AAAGCATA-CTGGAC TTTTGTTATGGCTAA SSON_3891 4100934 - 4101530 + | putative transposase TERM 5140 4102882 - 4102869 - g 70 -6.7 -4.09117 | CTTATTCAGAAATAA CCATC TGGT GATGG ATAAATACGATCGAG SSON_3892 4101517 - 4103625 + | putative transposase tnsC 4103622 - 4105289 + | ATP-binding protein tnsD 4105292 - 4106818 + | transposition protein TERM 5141 4107823 - 4107809 - g 81 -6.4 -4.74504 | AGTCGAATTGAAAAA TCTCGC AGG GCAAGA AAAAGTAGCCAAACT tnsE 4106927 - 4108435 + | transposition regulatory protein TERM 5142 4110407 - 4110447 + T 79 -9.8 -3.66429 | gap 2, opp_overlap 4110415, overlap 4110406 CAGCTCTCTAACGCT TGAGTT-AAGCCG-CGCCGC GAA GCGGCGTCGGCTTGAACGAA TTGTTAGACATTATT TERM 5143 4110438 - 4110415 - T 93 -16 -3.06133 | gap 1, opp_overlap 4110406 4110407 TAACGCTTGAGTTAA GCCG-CGCCGC GAA GCGGCGTCGGC TTGAACGAATTGTTA aadA 4111246 - 4110458 - | aminoglycoside resistance protein TERM 5144 4111291 - 4111268 - H 77 -10.2 -3.3482 | gap 1, opp_overlap 4111259 4111268 TAACTCCTGAATTAA GCCG-CGCCGC GAA GCGGTGTCGGC TTGAATGAATTGTTA TERM 5145 4111268 - 4111291 + H 80 -12.4 -3.11619 | gap 1, opp_overlap 4111268, overlap 4111259 TAACTCCTGAATTAA GCCG-CGCCGC GAA GCGGTGTCGGC TTGAATGAATTGTTA TERM 5146 4111852 - 4111909 + H 100 -25.9 -3.17486 | gap 1, opp_overlap 4111863, overlap 4111863 TAACGCCTGGCACAG CGGA-TCGCAAACCTGGCGCGGCTTTTG GTA CAAAAGGCGTGACAGGTTTGCGAATCCG TTGCTGCCACTTGTT TERM 5147 4111897 - 4111863 - H 82 -11.4 -3.60805 | opp_overlap 4111852 4111863 ACAGCGGATCGCAAA CCTGGCGCGGCTTTTG GTA CAAAAGGCGTGACAGG TTTGCGAATCCGTTG TERM 5148 4111863 - 4111897 + H 93 -13.6 -3.58269 | opp_overlap 4111863, overlap 4111852 ACAGCGGATCGCAAA CCTGGCGCGGCTTTTG GTA CAAAAGGCGTGACAGG TTTGCGAATCCGTTG TERM 5149 4112562 - 4112533 - H 71 -7.8 -3.96148 | CTCTGTTATTACAAA TCGTGCATGCCG TCTATC CTGCTTGCACGA TGCACATTATCTCAC TERM 5150 4114494 - 4114506 + H 72 -4.9 -4.72556 | overlap 4114500 CAGATAAGTGAAATC TAGTT CCA AACTA TTTTGTCATTTTTAA TERM 5151 4114735 - 4114710 - H 72 -9.1 -3.61398 | opp_overlap 4114710 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 5152 4114710 - 4114735 + H 100 -9.8 -5.61596 | opp_overlap 4114710 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_3898 4114725 - 4116071 + | IS4 orf TERM 5153 4116082 - 4116053 - f 89 -9.3 -4.59109 | opp_overlap 4116054, overlap 4116055 4116076 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTGCCGACCGGTG TERM 5154 4116054 - 4116081 + F 81 -12.8 -3.14211 | opp_overlap 4116053 4116055 4116076 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTGCCGACCGGT TERM 5155 4116080 - 4116055 - f 100 -16.3 -3.90762 | opp_overlap 4116054, overlap 4116053 4116076 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTGCCGACCGG TERM 5156 4116191 - 4116221 + F 78 -6.4 -4.61807 | TAACAAACTTGATTT TTTACTGTTTAAAT AAT ATTTAAACAATGAA TTTATATTTTATTTT TERM 5157 4116321 - 4116304 - f 71 -7.1 -4.05402 | opp_overlap 4116303, overlap 4116302 TTTGAATCAAAAATA CACTTAT TAAT ATAAGTG ATGATTCATGGTAAA lpfA 4116363 - 4116935 + | putative major fimbrial subunit SSON_3900 4116983 - 4117285 + | putative fimbrial chaperone SSON_3901 4117799 - 4117296 - | IS1 ORF TERM 5158 4119284 - 4119294 + r 76 -8.2 -4.10164 | opp_overlap 4119276 4119283, overlap 4119283 GACAGTACGCAAATT CGCG GCG CGCG TTTGTATACTGATAA SSON_3904 4120333 - 4119494 - | IS911 ORF2 TERM 5159 4120254 - 4120274 + g 72 -4.6 -4.65838 | AATACAGCCCGTCTG CCGTCTGG TTTTT CAGGACGG TTTTTCCAGTATCTG TERM 5160 4121488 - 4121510 + H 79 -10.6 -3.49232 | overlap 4121487 TTCCTTTATTGGGCT GGTGGGGTAA TAG TTACGCCACC TATTCTGTTTCGCAA TERM 5161 4122890 - 4122907 + G 70 -6.3 -4.1891 | gap 1, opp_overlap 4122866, overlap 4122892 CCCCGGTGGATTACT CA-CAGCC GAT GGCTGATG TTTATATTCGGGGCG SSON_3905 4122301 - 4123374 + | putative fimbrial protein pstS 4123622 - 4124662 + | phosphate transporter subunit pstC 4124749 - 4125708 + | phosphate transporter permease subunit pstA 4125708 - 4126598 + | phosphate transporter permease subunit pstB 4126689 - 4127462 + | phosphate transporter subunit phoU 4127477 - 4128202 + | transcriptional regulator PhoU TERM 5162 4128242 - 4128212 - f 93 -15 -2.85021 | opp_overlap 4128212 4128216, overlap 4128216 AAATAATTCACCAGA CAAATCCCAATAAC TTA ATTATTGGGATTTG TTATATATAACTTTA TERM 5163 4128212 - 4128242 + F 95 -14.3 -3.63054 | opp_overlap 4128212 4128216, overlap 4128216 AAATAATTCACCAGA CAAATCCCAATAA CTTAA TTATTGGGATTTG TTATATATAACTTTA TERM 5164 4128216 - 4128238 + F 86 -9.3 -4.42974 | opp_overlap 4128212 4128216, overlap 4128212 AATTCACCAGACAAA TCCCAATAA CTTAA TTATTGGGA TTTGTTATATATAAC TERM 5165 4128238 - 4128216 - f 83 -10 -4.09822 | opp_overlap 4128216 4128212, overlap 4128212 AATTCACCAGACAAA TCCCAATAAC TTA ATTATTGGGA TTTGTTATATATAAC TERM 5166 4128394 - 4128383 - f 75 -3 -5.24129 | GTTCGTTATAAAAAA CATT AATA AATG ACTGGATTGTTACTG TERM 5167 4128426 - 4128457 + F 100 -5.1 -6.28967 | opp_overlap 4128425 4128435 ATTCGCAGGCAAAAC CTGACATAACCAG AGAATA CTGGTGAAGTCGG TTTTTTTTGTTTATA bglG 4128488 - 4129324 + | transcriptional antiterminator BglG bglF 4129458 - 4131335 + | beta-glucoside-specific PTS system components IIABC SSON_3914 4133059 - 4131971 - | putative transposase TERM 5168 4132115 - 4132135 + g 83 -5.3 -5.0916 | overlap 4132095 4132092 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTGTATTGCCGG TERM 5169 4134290 - 4134315 + H 78 -12.7 -2.64572 | opp_overlap 4134287, overlap 4134288 4134284 4134281 GCACCTTAATTATCG TCGCATTCAGA ACAG TCTGGATGCGA TACGTTAATTCTTTC TERM 5170 4134484 - 4134469 - g 79 -4.7 -4.9218 | GAGTTATTAGAAAAA GCGTT AAGAGA AACGC AAAGCGAACTCAAAA TERM 5171 4135082 - 4135070 - g 72 -7.7 -3.92659 | overlap 4135064 CGCCGAAAATTGAAA TCCAG ATG CTGGA CTGGAAAACGCAGCG yieC 4134352 - 4135968 + | putative receptor protein TERM 5172 4136017 - 4136040 + F 87 -11 -3.97947 | opp_overlap 4136010, overlap 4136020 TAAAAATTGCTGCTT TAACGCTGGC TATT GCCAGCGGTA TTTCTGCTCAGTGGG TERM 5173 4136020 - 4136037 + F 78 -12.7 -2.7439 | opp_overlap 4136010, overlap 4136017 AAATTGCTGCTTTAA CGCTGGC TATT GCCAGCG GTATTTCTGCTCAGT TERM 5174 4136241 - 4136266 + F 100 -9.8 -5.61596 | opp_overlap 4136241 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 5175 4136266 - 4136241 - f 72 -9.1 -3.61398 | opp_overlap 4136241 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_3916 4136256 - 4137602 + | IS4 orf TERM 5176 4137613 - 4137584 - f 89 -9.3 -4.59109 | opp_overlap 4137585, overlap 4137586 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCAAAGGGGGGG TERM 5177 4137585 - 4137612 + F 81 -12.8 -3.14132 | opp_overlap 4137584 4137586 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCAAAGGGGGG TERM 5178 4137611 - 4137586 - f 100 -16.3 -3.90762 | opp_overlap 4137585, overlap 4137584 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCAAAGGGGG TERM 5179 4137689 - 4137703 + F 79 -4.2 -5.24129 | overlap 4137688 ATTTTGCCGTTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5180 4137890 - 4137913 + G 76 -3.8 -4.88736 | overlap 4137887 4137886 CAGTTTGGTTTTGGC GTTGAACGCG ATGC CGTGTTTGGC TTTTTATCGCTGATC trkD 4137761 - 4139629 + | potassium transport protein Kup TERM 5181 4139637 - 4139661 + F 100 -9.3 -5.50723 | AAATCTAACGCTAGA CGCCTCCTT TCTCCAT AAGGGGGCG TTTTTGTTTTCATGG TERM 5182 4140154 - 4140184 + G 75 -11.3 -3.00907 | gap 1, overlap 4140148 4140163 4140182 AAAGTCAGGCGGTAA TTCGCA-GCGGAGA ATGT TCTCCGTATGCGAA TATCATTCTCTGTGC rbsD 4139760 - 4140215 + | D-ribose pyranase TERM 5183 4140288 - 4140277 - g 70 -7.2 -4.07568 | TTCCCGGGCGTAAAA GCCC TCTC GGGC GCTGCGTTAAATGTC rbsA 4140223 - 4141728 + | D-ribose transporter ATP binding protein rbsC 4141733 - 4142698 + | ribose ABC transporter permease protein TERM 5184 4143691 - 4143715 + F 90 -9.9 -4.38712 | opp_overlap 4143687 4143684, overlap 4143692 AAGAAAAGCAGGGCA CGCGCCACCCT AAC ACGGTGGCGCA TTTTATGGACATCCC TERM 5185 4143692 - 4143714 + F 83 -13.4 -3.22906 | opp_overlap 4143687 4143684, overlap 4143691 AGAAAAGCAGGGCAC GCGCCACCCT AAC ACGGTGGCGC ATTTTATGGACATCC rbsK 4143735 - 4144664 + | ribokinase TERM 5186 4144688 - 4144704 + G 90 -11.5 -3.91897 | opp_overlap 4144686, overlap 4144689 TACAATGAAAGATGT TGCCCGC CTG GCGGGCG TTTCTACCTCAACAG TERM 5187 4144689 - 4144703 + G 78 -12.8 -2.94924 | opp_overlap 4144686, overlap 4144688 ACAATGAAAGATGTT GCCCGC CTG GCGGGC GTTTCTACCTCAACA rbsR 4144668 - 4145660 + | transcriptional repressor RbsR yieO 4147053 - 4145626 - | putative transport protein yieP 4147624 - 4147076 - | hypothetical protein TERM 5188 4149860 - 4149847 - R 75 -6.7 -4.41177 | overlap 4149851 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5189 4150086 - 4150062 - R 71 -8 -3.93061 | gap 1, opp_overlap 4150069 4150081 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCGAATTTT TERM 5190 4150640 - 4150628 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5191 4153128 - 4153107 - R 74 -8.7 -3.91196 | opp_overlap 4153124 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 5192 4153481 - 4153500 + r 100 -10.8 -6.02914 | opp_overlap 4153478 4153481 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA TERM 5193 4153500 - 4153481 - R 73 -10.8 -3.00946 | opp_overlap 4153481, overlap 4153478 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA yifDA 4154408 - 4153569 - | transcriptional regulator HdfR TERM 5194 4153766 - 4153783 + g 72 -9.9 -3.31144 | CAATCTGTTGCTGTG CCAGTTC AGCA GAACTGG TTGTCAGAATGGGAA yifE 4154527 - 4154865 + | hypothetical protein TERM 5195 4154872 - 4154884 + T 93 -6.9 -5.72616 | opp_overlap 4154866 4154872 GATGATTAATAAAAA GGGCG AAA TGCCC TTTTTTTATGTCAGT TERM 5196 4154884 - 4154872 - T 85 -6.2 -5.15167 | opp_overlap 4154872, overlap 4154866 GATGATTAATAAAAA GGGC GAAAT GCCC TTTTTTTATGTCAGT SSON_3934 4156137 - 4155340 - | IS21 ORF2 SSON_3935 4157309 - 4156137 - | IS21 ORF1 TERM 5197 4156467 - 4156487 + g 77 -9.7 -3.59979 | overlap 4156463 4156471 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 5198 4156471 - 4156483 + g 75 -6.9 -4.44046 | overlap 4156463 4156467 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_3936 4157910 - 4158413 + | IS1 ORF ilvL 4159675 - 4159773 + | ilvG operon leader peptide TERM 5199 4159823 - 4159796 - f 79 -11.2 -3.45366 | opp_overlap 4159798, overlap 4159781 4159798 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGACCTTAAA TERM 5200 4159798 - 4159821 + F 100 -13.8 -5.81032 | opp_overlap 4159796 4159798 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5201 4159821 - 4159798 - f 86 -13.8 -3.29727 | opp_overlap 4159798, overlap 4159796 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5202 4160716 - 4160727 + G 70 -5.8 -4.25283 | overlap 4160710 TGACCTGCTGATCGC CGTG GGCG CACG TTTTGATGACCGGGT TERM 5203 4161509 - 4161528 + G 73 -11.4 -2.72227 | opp_overlap 4161499 GAGAACGTCTGGCCG CTGGTGCC GCCT GGCGCCAG TAATTCAGAAATGTT ilvG 4159913 - 4161559 + | acetolactate synthase 2 catalytic subunit ilvM 4161556 - 4161819 + | acetolactate synthase 2 regulatory subunit TERM 5204 4161826 - 4161809 - f 72 -5.5 -4.3767 | overlap 4161811 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAATATAAAAATG ilvE 4161839 - 4162768 + | branched-chain amino acid aminotransferase TERM 5205 4162779 - 4162800 + F 86 -11.6 -3.53012 | opp_overlap 4162779 AATAAATACAAAAAA TGGGACGG CACTTA CCGTCCCA TTTACGAGACAGACA TERM 5206 4162800 - 4162779 - f 100 -12.3 -5.61913 | opp_overlap 4162779 AATAAATACAAAAAA TGGGACGGC ACTT ACCGTCCCA TTTACGAGACAGACA ilvD 4162833 - 4164683 + | dihydroxy-acid dehydratase TERM 5207 4164930 - 4164920 - g 79 -2.4 -5.30348 | ACGGAAGAACAAAAA GCGC ACG GCGT GATCACTGCTTCTGC TERM 5208 4164953 - 4164970 + G 71 -3.3 -4.77165 | gap 1, opp_overlap 4164955, overlap 4164955 GCTTCTGCGGGTAAC CACG-CGC AGG GCGTCGCG TTTTCTTCTGCGCGG ilvA 4164686 - 4166230 + | threonine dehydratase TERM 5209 4166265 - 4166238 - T 89 -9.2 -4.65895 | gap 1, overlap 4166239 CGGGTTAGGGAAAAA TGCCTGAT-AGCG CTT CGCTTATCAGGCC TACCCGCGCGACAAC TERM 5210 4166264 - 4166239 - T 85 -12.7 -3.39216 | gap 1, overlap 4166238 GGGTTAGGGAAAAAT GCCTGAT-AGCG CTT CGCTTATCAGGC CTACCCGCGCGACAA ilvY 4167175 - 4166282 - | DNA-binding transcriptional regulator IlvY TERM 5211 4166323 - 4166339 + g 100 -9.4 -5.60993 | opp_overlap 4166313 4166323 AGAACGCCTCAATCA GCGGCT CATGC AGCCGC TTTTTTTGTGCACAC TERM 5212 4167141 - 4167126 - G 83 -10.4 -4.07568 | opp_overlap 4167116 4167132 4167132 GCGCTGCGGCCAAAA TGGCGG CTTT CCGCCA GATGCAGGAAGGTTT TERM 5213 4167373 - 4167351 - g 70 -9.8 -3.19175 | CTTCAATACACTGAA CCTGCGCCAG CAG CTGGCACAGC TGGGCAAATGTCGCT ilvC 4167325 - 4168800 + | ketol-acid reductoisomerase TERM 5214 4168886 - 4168853 - T 90 -9.7 -4.45083 | gap 1, opp_overlap 4168856 4168857 4168860, overlap 4168855 4168856 4168860 GGGAGAGGGAGAAAA CACTCAAGGCCTTCTC CTG GAGAAGGCCTTGC-TA TTAGTTACGGTACAG TERM 5215 4168885 - 4168855 - T 93 -12.6 -3.83188 | opp_overlap 4168856 4168857 4168860, overlap 4168853 4168856 4168860 GAGAGGGAGAAAACA CTCAAGGCCTTCTC CTG GAGAAGGCCTTGCT ATTAGTTACGGTACA TERM 5216 4168884 - 4168856 - T 93 -16.1 -2.8919 | opp_overlap 4168856 4168857 4168860, overlap 4168855 4168853 4168860 AGAGGGAGAAAACAC TCAAGGCCTTCTC CTG GAGAAGGCCTTGC TATTAGTTACGGTAC TERM 5217 4168856 - 4168884 + T 100 -16.1 -3.24825 | opp_overlap 4168856 4168855 4168853 4168860, overlap 4168857 4168860 AGAGGGAGAAAACAC TCAAGGCCTTCTC CTG GAGAAGGCCTTGC TATTAGTTACGGTAC TERM 5218 4168857 - 4168883 + T 100 -19.6 -2.54574 | opp_overlap 4168856 4168855 4168853 4168860, overlap 4168856 4168860 GAGGGAGAAAACACT CAAGGCCTTCTC CTG GAGAAGGCCTTG CTATTAGTTACGGTA TERM 5219 4168880 - 4168860 - T 100 -15.5 -3.30972 | opp_overlap 4168857 4168856 4168860, overlap 4168856 4168855 4168853 GGAGAAAACACTCAA GGCCTTCTC CTG GAGAAGGCC TTGCTATTAGTTACG TERM 5220 4168860 - 4168880 + T 100 -15.5 -3.42147 | opp_overlap 4168860 4168856 4168855 4168853, overlap 4168857 4168856 GGAGAAAACACTCAA GGCCTTCTC CTG GAGAAGGCC TTGCTATTAGTTACG ppiC 4169168 - 4168887 - | peptidyl-prolyl cis-trans isomerase C TERM 5221 4169288 - 4169272 - R 100 -13.7 -4.18802 | ACATATATGGCAAAA GCCCGGA AAA TCCGGGC TTCGCAGGTCCCTCA SSON_3947 4170595 - 4169690 - | insertion element IS2 transposase InsD SSON_3948 4170918 - 4170553 - | insertion sequence 2 OrfA protein TERM 5222 4172907 - 4172880 - g 84 -10.6 -3.72592 | AATGCGCATGAAGAA CGTCAACCAACT GTTT AGCTGGATGACG GAGATGCTGGAAGGC TERM 5223 4173226 - 4173211 - g 81 -10.4 -3.90922 | ACGCTGTGTAAAGAA CGCCGT CAGT ACGGCG AGCTGGTGCGCCCGG rep 4171369 - 4173390 + | ATP-dependent DNA helicase Rep TERM 5224 4173427 - 4173396 - T 72 -10.8 -2.76911 | opp_overlap 4173395 4173395, overlap 4173395 4173392 4173405 AGGGAAATAATCAAG GCCGGAAAAGATGC GTCA GCATCGCATCCGGC ACTTACTCATTAATG TERM 5225 4173454 - 4173480 + T 76 -8.8 -3.73224 | gap 1 AATGCACTTCCAGCG GCCAGTGGACA TAGCTC TG-CCACTGGC TTTCCTGAGCAATAA gppA 4174921 - 4173437 - | guanosine pentaphosphate phosphohydrolase TERM 5226 4174116 - 4174099 - G 93 -9.9 -4.57569 | TCAGTTCGGTAAAAA TGGCGAT CAGG ATCGCCA GACCACTCGGGAACA TERM 5227 4174800 - 4174810 + g 81 -6.8 -4.65916 | AGGCCAGCAGCCAGA CGCA CTT TGCG TTTTATTCGCGTCAG rhlB 4176320 - 4175055 - | ATP-dependent RNA helicase RhlB TERM 5228 4175572 - 4175590 + g 100 -7.4 -5.5604 | overlap 4175573 CACTCTTCTTCGATC AGCGTTTG CAG CAAACGCA TTTTTTCTTCGTTAG TERM 5229 4175573 - 4175589 + g 86 -10.9 -3.91997 | overlap 4175572 ACTCTTCTTCGATCA GCGTTTG CAG CAAACGC ATTTTTTCTTCGTTA trxA 4176397 - 4176780 + | thioredoxin rhoL 4176921 - 4177022 + | putative Rho operon leader peptide TERM 5230 4177510 - 4177498 - g 70 -4.1 -4.63486 | ACGCCCGCAACAAAA TCCTC TTT GAGAA CTTAACCCCGCTGCA rho 4177107 - 4178366 + | transcription termination factor Rho TERM 5231 4178381 - 4178410 + G 95 -13.7 -3.38183 | opp_overlap 4178386, overlap 4178386 AATTTGTCTTATGCC AAAAACGCCACGT GTTT ACGTGGCGTTTTG CTTTTATATCTGTAA TERM 5232 4178386 - 4178405 + G 100 -13.6 -4.75518 | opp_overlap 4178386, overlap 4178381 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC TERM 5233 4178405 - 4178386 - g 100 -13.6 -4.62069 | opp_overlap 4178381 4178386 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC SSON_3955 4178376 - 4178594 + | hypothetical protein TERM 5234 4178626 - 4178642 + G 100 -8.1 -5.7946 | TTTACTGACAGTGAG TACTGAT CTC ATCAGTA TTTTTTTATTCACGA TERM 5235 4179047 - 4179085 + G 89 -14 -3.14881 | opp_overlap 4179055, overlap 4179033 4179055 TTTGCCGTCTGGGCG GCCATTAATGCGTTCAAC ATG GTTGATGGCATTGATGGC TTGCTGGGCGGGTTG TERM 5236 4179672 - 4179662 - g 70 -6.8 -4.11751 | overlap 4179652 ATTAAGCGCGTAAAA CGCA GAC TGCG TAGAAATCGTGGTGG rfe 4178606 - 4179709 + | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase TERM 5237 4180135 - 4180115 - g 72 -11.1 -3.02144 | opp_overlap 4180119 4180120, overlap 4180120 GGATGGTGGGCAACA GCAAAGCCG ATG CGGCGTTGC TGGATGAAATGATTA TERM 5238 4180130 - 4180120 - g 74 -8.2 -3.92324 | opp_overlap 4180120 4180119, overlap 4180115 GTGGGCAACAGCAAA GCCG ATG CGGC GTTGCTGGATGAAAT wzzE 4179718 - 4180767 + | lipopolysaccharide biosynthesis protein WzzE TERM 5239 4180778 - 4180803 + F 100 -18.3 -3.61517 | opp_overlap 4180767 4180771 4180774 AATAGCAACACTGCT GCGGTGAGCGC AAAG GCGCTCGCCGC TTATTCGAAGAGAAT TERM 5240 4181514 - 4181496 - g 78 -8.9 -4.15044 | GTGGCTTTGAAGAAA TCTGCCA CGCGT TGGCAGA CATTGCCACCACGCA wecB 4180781 - 4181953 + | UDP-N-acetyl glucosamine-2-epimerase TERM 5241 4182128 - 4182143 + G 76 -3.9 -5.00616 | CGAGCGTAGTAAAAA CTGCC GTAGAA GGCGG TTTTTTACGAGCGAG TERM 5242 4182605 - 4182620 + G 70 -5.4 -4.31692 | CCGAAAACAGCTTCC GCGATG TGAA TATCGC TTTTGCTAATGAATT wecC 4181950 - 4183212 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 5243 4183734 - 4183704 - g 74 -7.5 -4.07885 | gap 1, opp_overlap 4183730 4183731 TATTCCGCGTCAAAA GCCAGCAGCG-ACC ATCT GGTGCGCGCCTGGC TGCGGACCTACGGTC rffG 4183212 - 4184279 + | dTDP-glucose 4,6-dehydratase TERM 5244 4184550 - 4184564 + G 72 -7.8 -3.97947 | opp_overlap 4184528 4184537 CAGCCCAGCCCGGAC GGTCTG GCG CAGGCC TTTATCATCGGTGAA rffH 4184298 - 4185179 + | glucose-1-phosphate thymidylyltransferase TERM 5245 4185556 - 4185543 - g 76 -8.1 -4.19258 | opp_overlap 4185546 4185547 ACAGTGGATTGAAAA TGCCG TGCG CGGCA CCTTTGATCATCAAT wecD 4185286 - 4185831 + | TDP-fucosamine acetyltransferase TERM 5246 4185935 - 4185963 + G 81 -9.6 -4.07568 | gap 1, opp_overlap 4185962, overlap 4185962 GATGGCGGTTTTACC CGTCGCTGCCAGC AGTG GCTGG-AGCAACG TTTTGGCAGCGCCAA wecE 4185836 - 4186966 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 5247 4187082 - 4187102 + G 76 -11.1 -3.36289 | CCGGCGGGGCTTGGG CTGGCGGCA AAT TTCCGCCAG TTGATTACCGTGCTC wzxE 4186968 - 4188218 + | putative cytochrome TERM 5248 4188267 - 4188277 + G 72 -4.6 -4.65895 | overlap 4188239 CTCACCATAACCGAA CCGT TTT GCGG TTTTTCAATGACGCG TERM 5249 4188488 - 4188523 + G 85 -6.8 -4.8667 | overlap 4188518 AATCCCACACTGTGG CTGGCTCTGCTGAGTG GTGG CATTAAGCCCAGCCAG TTTTTCTGGCATATC TERM 5250 4188570 - 4188584 + G 71 -2.1 -5.02074 | ATGAGCTTTCCAGTG GCTTG AGATA TAAGC TTTTTTACCCGCTAC yifM 4188215 - 4189294 + | 4-alpha-L-fucosyltransferase TERM 5251 4189756 - 4189773 + G 71 -3.3 -4.80167 | overlap 4189759 AGTGAAGTCTCCGGC GTGGCGT TAAA ACGCTTC TTTTACTTTTTCATC TERM 5252 4189759 - 4189770 + G 74 -5.8 -4.47007 | overlap 4189756 GAAGTCTCCGGCGTG GCGT TAAA ACGC TTCTTTTACTTTTTC TERM 5253 4189824 - 4189839 + G 71 -3.2 -4.77036 | CTTTCTGCGCCAGGA CAGCAA AGCG TGGCTG TTTTTCCTCGTCAGC wecF 4189291 - 4190643 + | putative entero common antigen polymerase TERM 5254 4190926 - 4190891 - g 77 -6 -4.68593 | gap 1, opp_overlap 4190894, overlap 4190894 TTCAGTACGTAAAAA GTACCCGCAGGCGCAGG TTT CCCGCGT-TGCCGGTGC CGATCTCTGGGAAGA wecG 4190646 - 4191386 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 5255 4191400 - 4191433 + F 75 -9.5 -3.5087 | opp_overlap 4191405, overlap 4191398 4191400 4191402 4191404 GATTTTCCTCTCTTT GTAAAGCGACGGAGT GGTC ACTCCGTCGCCTGTC TGCTTTTTTATTACA TERM 5256 4191400 - 4191436 + F 76 -2.5 -5.4505 | gap 3, opp_overlap 4191405, overlap 4191400 4191398 4191402 4191404 GATTTTCCTCTCTTT GTA-A-AG-CGACGGAGT GGTC ACTCCGTCGCCTGTCTGC TTTTTTATTACACAA TERM 5257 4191402 - 4191431 + F 77 -10.7 -3.30867 | opp_overlap 4191405, overlap 4191400 4191398 4191400 4191404 TTTTCCTCTCTTTGT AAAGCGACGGAGT GGTC ACTCCGTCGCCTG TCTGCTTTTTTATTA TERM 5258 4191404 - 4191429 + F 83 -13.3 -3.18764 | opp_overlap 4191405, overlap 4191402 4191400 4191398 4191400 TTCCTCTCTTTGTAA AGCGACGGAGT GGTC ACTCCGTCGCC TGTCTGCTTTTTTAT TERM 5259 4191428 - 4191405 - f 100 -16.8 -3.53012 | opp_overlap 4191404 4191402 4191400 4191398 4191400 TCCTCTCTTTGTAAA GCGACGGAGT GGTC ACTCCGTCGC CTGTCTGCTTTTTTA TERM 5260 4191548 - 4191536 - f 72 -9.1 -3.57039 | TACCCATAACGATAA CCGGT AAC ACCGG AAAGCATGCAAACAC TERM 5261 4191903 - 4191913 + G 77 -8.2 -4.06892 | opp_overlap 4191902 4191899 GATCTCAGAAATCAC CGCC ATT GGCG TTTATGTCCAGTTCT TERM 5262 4192069 - 4192049 - g 71 -10.5 -2.87051 | opp_overlap 4192049, overlap 4192048 TCGCGATGATCAAAG TCACCACGA TTA TCGTGATGA TTGTCATTGGCCTGG TERM 5263 4192540 - 4192524 - g 72 -5.7 -4.58395 | CGCACTGGCGAAAAA CCGTCAG TTA CCGGCGG CGATGGCGAAAGTTT yifK 4191577 - 4192962 + | putative transport protein YifK TERM 5264 4193508 - 4193523 + F 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT aslB 4193646 - 4194881 + | putative arylsulfatase regulator TERM 5265 4194904 - 4194886 - T 100 -11.7 -5.37865 | TGAATAAGTAAAAAA GCGGCCA TTTTG TGGCCGC CTGCGGTTGATTGCC TERM 5266 4195243 - 4195233 - T 72 -2.6 -4.91459 | opp_overlap 4195233 TAATAGTGACAAAAA TAAA TTA TTTA TTTATCCAGAAAATG TERM 5267 4195332 - 4195348 + T 85 -3.7 -5.46698 | CGGGTTTATTATATT GCGTTGA TTA TTAATGC TTTTTTAGTTTTAAC TERM 5268 4195708 - 4195733 + T 100 -11.9 -5.64274 | ACAGACCTGTTTTAA CGCCTGCTC CGTAATAA GAGCAGGCG TTTTTTTATGCATCA hemY 4196984 - 4195788 - | putative protoheme IX biogenesis protein TERM 5269 4196025 - 4196039 + g 70 -4.2 -4.62302 | overlap 4196026 GCCGACGTTTTTGAT CTGCTG GCG CAGCAC TTTTTCCAGCTGTTC hemX 4198204 - 4196987 - | putative uroporphyrinogen III C-methyltransferase TERM 5270 4197950 - 4197961 + g 70 -3.6 -4.62336 | CAGTTCGGCTTTTTG GCTC TCCT GGGC TTTTTGCAATGCCGT hemD 4198966 - 4198226 - | uroporphyrinogen-III synthase hemC 4199925 - 4198963 - | porphobilinogen deaminase TERM 5271 4200790 - 4200767 - g 82 -9.6 -4.2828 | CCTGATTGATGAAAA CCGCTTTCGT CATA ATGAAAGCGG CAGCCTGGGGGGCGA TERM 5272 4202298 - 4202314 + G 71 -9.3 -3.53811 | CGCCTTTCCAGCACC CGCCAGG AAA CCGGGCG TTTCAAGGCGCTGCG TERM 5273 4202453 - 4202433 - g 75 -6.8 -4.30987 | overlap 4202429 ATTTCGCATAACAAA CTGCACGG CCTGT CAGTGCAG GTTGAAACCAATCAC cyaA 4200291 - 4202837 + | adenylate cyclase TERM 5274 4202871 - 4202842 - Tf 77 -11.5 -3.14211 | gap 1, opp_overlap 4202839 ATTTTTCGTGATGAA CGTGCCGGA-AAGC GAG GCTTATCCGGCATG CAATCTTAGCGGAAA cyaY 4203197 - 4202877 - | frataxin-like protein SSON_3979 4202988 - 4203473 + | hypothetical protein yifL 4203744 - 4203947 + | hypothetical protein dapF 4203984 - 4204808 + | diaminopimelate epimerase TERM 5275 4204960 - 4204923 - g 76 -12.8 -2.64099 | gap 1, opp_overlap 4204923 4204928, overlap 4204922 CGCGCGCAGTAGAAG CGATACGTGTGCCGCAT CCGGT ACGCGGCAC-CGTTTCG TTGGTCGAGTGGCAC TERM 5276 4204923 - 4204960 + G 74 -10.6 -3.16564 | gap 1, opp_overlap 4204923 4204922, overlap 4204928 CGCGCGCAGTAGAAG CGATACGTGTGCCGCAT CCGGT ACGCGGCAC-CGTTTCG TTGGTCGAGTGGCAC TERM 5277 4204928 - 4204955 + G 72 -7.7 -3.95852 | gap 1, opp_overlap 4204923 4204922, overlap 4204923 GCAGTAGAAGCGATA CGTGTGCCGCAT CCGGT ACGCGGCAC-CG TTTCGTTGGTCGAGT TERM 5278 4205036 - 4205059 + G 81 -8.8 -4.40804 | opp_overlap 4205036 4205038, overlap 4205026 GCGCTGTTGATGGAA CAGGCTATCG CCAA CGAAGGCCTG TTTTATCGCCTACTC yigA 4204805 - 4205512 + | hypothetical protein TERM 5279 4205655 - 4205637 - g 70 -5.8 -4.18018 | overlap 4205623 TTTTGCCAGCGAAAA CGGCCTGC AAA GCTGGCAG CAATGTGATGTGACG TERM 5280 4205863 - 4205847 - g 72 -5.1 -4.57569 | TCATCTGCCGAAAAA TATCGAC GTC GACGATA TGAATCGGCTGCTGG TERM 5281 4206093 - 4206124 + G 79 -5 -4.96848 | overlap 4206064 4206122 GCACTGGCTTGATTT GCGCGACCTGTTTG GTAG CGAAGACGACGCGC TTTTTCTGTCGAAAC xerC 4205509 - 4206405 + | site-specific tyrosine recombinase XerC yigB 4206405 - 4207121 + | flavin mononucleotide phosphatase TERM 5282 4207272 - 4207244 - g 83 -10.1 -4.05714 | opp_overlap 4207255, overlap 4207246 AGCCTTAATGACAAA CAGCGCGAAGCGG TGG CCGCGCCACGCAG CAACCTTCTGGTGCT TERM 5283 4207270 - 4207246 - g 85 -11.3 -3.6217 | opp_overlap 4207255, overlap 4207244 CCTTAATGACAAACA GCGCGAAGCGG TGG CCGCGCCACGC AGCAACCTTCTGGTG TERM 5284 4207255 - 4207277 + G 71 -9 -3.44051 | opp_overlap 4207246 4207244 CAAACAGCGCGAAGC GGTGGCCGCG CCA CGCAGCAACC TTCTGGTGCTGGCGG TERM 5285 4208561 - 4208549 - g 77 -6.2 -4.72272 | overlap 4208551 CTGTTGCAGGAAAAA GCCC TCGCC GGGC GAGCTGCCAGCGCCT uvrD 4207205 - 4209367 + | DNA-dependent helicase II TERM 5286 4209419 - 4209375 - T 100 -17.9 -3.41878 | opp_overlap 4209374 4209375, overlap 4209376 CGGTGTAATTTACAA CTCCGTTGCAGGATGCGGTGC GCC ACACCGCATCCTGCATCAGCA CCTTACTTAGCGCAC TERM 5287 4209375 - 4209420 + T 73 -11.2 -2.60194 | gap 1, opp_overlap 4209375 4209376, overlap 4209374 CGGTGTAATTTACAA CT-CCGTTGCAGGATGCGGTG CGCCA CACCGCATCCTGCATCAGCAC CTTACTTAGCGCACT TERM 5288 4209418 - 4209376 - T 100 -19.2 -2.64912 | opp_overlap 4209375 4209374, overlap 4209375 GGTGTAATTTACAAC TCCGTTGCAGGATGCGGTGC GCC ACACCGCATCCTGCATCAGC ACCTTACTTAGCGCA SSON_3987 4210324 - 4209422 - | hypothetical protein TERM 5289 4210304 - 4210314 + g 100 -3.2 -5.85011 | opp_overlap 4210289 CGTTAATAAAAATAA CGTT GCG AGCG TTTTTTTCATTTTTG TERM 5290 4210604 - 4210590 - H 74 -3.5 -5.06414 | CTGGCTCAACAAAAA CACGG CATTC CCATG TTTATTAATCCCAAC TERM 5291 4210924 - 4210899 - H 72 -9.1 -3.61398 | opp_overlap 4210899 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 5292 4210899 - 4210924 + H 100 -9.8 -5.61596 | opp_overlap 4210899 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 5293 4211302 - 4211263 - g 76 -7.8 -4.25104 | overlap 4211283 GCGTGTTCACGAAAA CAGCGCAGCTCTGGCATA ACGC CACGCCACATCCGCACTG GTGCGGCCTGACCCT SSON_3988 4210914 - 4211624 + | IS4 orf SSON_3989 4211621 - 4212259 + | IS4 orf TERM 5294 4212270 - 4212241 - f 89 -9.3 -4.59109 | overlap 4212243 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACACCTTCTGCTGA TERM 5295 4212268 - 4212243 - f 100 -16.3 -3.90762 | overlap 4212241 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACACCTTCTGCT corA 4212978 - 4213928 + | magnesium/nickel/cobalt transporter CorA TERM 5296 4213936 - 4213963 + T 87 -10.7 -4.07535 | opp_overlap 4213934 GGCTGTAATATGAGT GCCGGATAAAG CTATTT TTTTATCCGGC TTATTTCTAAAAATT SSON_3992 4215598 - 4215095 - | IS1 ORF TERM 5297 4216167 - 4216156 - R 79 -4.4 -5.19916 | AAAATATTTAAAAAA GAAG TACA CTTC ACATTTTTTCATTAC TERM 5298 4216421 - 4216456 + r 76 -8.4 -4.07568 | opp_overlap 4216421 GCTGTAACTATACGA TGTCGCTGTGAGTA AGTTAGTG TGCTGACAGCGACA TTTTAGCCGAGGGAA TERM 5299 4216967 - 4216996 + r 81 -5.3 -5.24796 | TTTTTATTGATGGGG TATATTTTAATTA AATA TAATTGAAATGTA TTTTTATTCTATAAA TERM 5300 4217347 - 4217374 + r 77 -10.6 -3.3449 | opp_overlap 4217346 4217343, overlap 4217344 AGATAAATAAGTCAG TGGGTAGGCTCT TTAA ACGGCCTACCCA TGTTAATTCTTAACT TERM 5301 4217376 - 4217388 + r 76 -4.9 -4.85599 | opp_overlap 4217343 AAACGGCCTACCCAT GTTAA TTC TTAAC TTTTTCTACGCTGCG rarD 4218271 - 4217384 - | hypothetical protein TERM 5302 4217462 - 4217450 - G 72 -5.5 -4.46112 | opp_overlap 4217450 CGCCACCCAAATAAA GGCGA AAG TCACC ATCTTATCGGCACCC TERM 5303 4217469 - 4217479 + g 72 -4.6 -4.59773 | AAAGTCACCATCTTA TCGG CAC CCGG TTTTTCACCATAAAA TERM 5304 4217848 - 4217835 - G 75 -6.7 -4.43477 | GGTAGCGAACCAAAA GTCCA CAGC TGGAC TAACACGCCACATAT TERM 5305 4218257 - 4218222 - G 74 -3.2 -4.89521 | gap 1, opp_overlap 4218224 4218225, overlap 4218225 ATACCCCAAATAAAA TAAGCGGCAAGAGCG AGTAATA CGC-CCTGCCGCGTT TGTTTTGCATCCATC TERM 5306 4218224 - 4218255 + g 70 -3.6 -4.68908 | gap 1, opp_overlap 4218222 4218225, overlap 4218225 ACCCCAAATAAAATA AGCGGCAAGAGCG AGTAATA CGCCCT-GCCGCG TTTGTTTTGCATCCA TERM 5307 4218254 - 4218225 - G 90 -9.3 -4.54026 | gap 1, opp_overlap 4218225 4218224, overlap 4218222 CCCCAAATAAAATAA GCGGCAAGAGCG AGTAATA CGC-CCTGCCGC GTTTGTTTTGCATCC TERM 5308 4218300 - 4218312 + r 72 -4.8 -4.67943 | opp_overlap 4218300, overlap 4218293 4218295 TTTTAATTGGTAACA GCAG TTTAC CTGC TTTTATGTCTTCAAC yigI 4218790 - 4218323 - | hypothetical protein pldA 4218955 - 4219824 + | phospholipase A TERM 5309 4219908 - 4219929 + F 100 -12.3 -5.27335 | overlap 4219915 TTGCAGTTTCTCGCG CAGGCGCTG AAAA TAGCGCCTG TTTTTATTTCAGGCA TERM 5310 4221587 - 4221571 - g 71 -9.5 -3.5394 | opp_overlap 4221570 AAACTGTTCGCCAAA TTACGCA AAC TGCGTAA ATCGATTGCCGATGA recQ 4219957 - 4221786 + | ATP-dependent DNA helicase RecQ yigJ 4222099 - 4222467 + | hypothetical protein TERM 5311 4222488 - 4222524 + T 89 -8.8 -4.58395 | gap 1, opp_overlap 4222491 4222500, overlap 4222491 GACGCGTCTTCAGAG TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA TTTTTCACGCATGCC TERM 5312 4222520 - 4222491 - T 90 -14.3 -3.25823 | opp_overlap 4222491 4222488, overlap 4222500 GCGTCTTCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA TERM 5313 4222491 - 4222520 + T 79 -12.1 -3.23855 | opp_overlap 4222491 4222500, overlap 4222488 GCGTCTTCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA yigK 4222945 - 4222529 - | hypothetical protein pldB 4223260 - 4224282 + | lysophospholipase L2 yigL 4224290 - 4225090 + | putative sugar phosphatase metR 4226906 - 4225953 - | regulator for metE and metH yigM 4225166 - 4226065 + | hypothetical protein TERM 5314 4226356 - 4226336 - Gf 72 -7.5 -3.89346 | opp_overlap 4226345, overlap 4226340 GCTGCACCGGATAAA TCAACAGCG TCT CGCTGGCGA GATCTTCCGGTGTAA TERM 5315 4226352 - 4226340 - Gf 73 -9.1 -3.61244 | opp_overlap 4226345, overlap 4226336 CACCGGATAAATCAA CAGCG TCT CGCTG GCGAGATCTTCCGGT TERM 5316 4226871 - 4226881 + gF 74 -6.8 -4.23434 | overlap 4226867 GCCGCAGTTCCGCAA CGCT TGT AGCG TTTTCAGGTGTTTTA TERM 5317 4227319 - 4227297 - g 70 -4.1 -4.71426 | gap 1, opp_overlap 4227317, overlap 4227301 CTGGGATCAACAAAA GCAAGCGGGT ATCG ACCTGCT-GC CGGTGGGCGATTTTG TERM 5318 4229355 - 4229330 - g 74 -7.5 -4.07687 | overlap 4229348 ACTGTGGCCTGAAAA CGCGCGGCT GGCCAGAA ACCCGCGCG GCACTGGCGAACATG metE 4227142 - 4229403 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 5319 4229549 - 4229520 - f 74 -10.7 -3.28712 | TTGTTGGCCGGACAA GGCGTTCACGCCG CATC CGGCATGAACAAC GCGCACTTTGCCAAT TERM 5320 4229572 - 4229593 + F 93 -10.2 -4.39166 | opp_overlap 4229568, overlap 4229559 TTGCCAATAATCTGA TGGCTTCC ATCACC GGAAGCCA TTTTGCTATCTGCGC SSON_4004 4230427 - 4231332 + | insertion element IS2 transposase InsD ysgA 4233490 - 4232801 - | putative hydrolase TERM 5321 4233032 - 4233020 - G 71 -9.1 -3.49475 | CTGACCGCCATATAA GCCGA GAA TCGGC GCGTTAAGATCGGTT udp 4233875 - 4234636 + | uridine phosphorylase TERM 5322 4234656 - 4234672 + F 100 -9.4 -4.98672 | CTTCTCCTGTCTGAA GGCCGA CGCGT TCGGCC TTTTGTATTTTTGCG TERM 5323 4235392 - 4235378 - g 85 -7.1 -4.78839 | AAGGCGACAATAAAA CCCAG GGCAA CTGGG GCGAGGTAGTATTGA yigN 4234777 - 4236204 + | DNA recombination protein RmuC ubiE 4236299 - 4237054 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 5324 4237214 - 4237236 + G 76 -10.6 -3.29471 | overlap 4237215 TTCGACGTCATTGAT TCTGGTGTTC AGC GAACGCCAGG TTGATGTACTGGGCG TERM 5325 4237215 - 4237235 + G 73 -11.9 -2.57468 | overlap 4237214 TCGACGTCATTGATT CTGGTGTTC AGC GAACGCCAG GTTGATGTACTGGGC yigP 4237068 - 4237673 + | hypothetical protein TERM 5326 4237789 - 4237752 - g 83 -9.9 -4.1196 | gap 1, opp_overlap 4237752 4237755 AACTGATCCCCAAAA TGCGTATCACCCT-GCCG CTA CGGCTATGGCGATACTCA TTATTCTGGATGCCA ubiB 4237670 - 4239310 + | putative ubiquinone biosynthesis protein UbiB tatA 4239347 - 4239658 + | twin argininte translocase protein A SSON_4012 4239662 - 4240177 + | sec-independent translocase TERM 5327 4240518 - 4240530 + G 70 -4.8 -4.53303 | overlap 4240509 GCCGCTGCTGGTTTC CAGC TCTCT GCTG TTTTATATCGGCATG yigU 4240180 - 4240956 + | TatABCE protein translocation system subunit TERM 5328 4240983 - 4240958 - f 86 -8.9 -4.49364 | opp_overlap 4240960 4240963, overlap 4240959 4240960 4240963 AAACTGAAGAATAAA TTCAACCGCCC GTCA GGGCGGTTGTC ATATGGAGTACAGGA TERM 5329 4240982 - 4240959 - f 81 -12.4 -3.27992 | opp_overlap 4240960 4240963, overlap 4240958 4240960 4240963 AACTGAAGAATAAAT TCAACCGCCC GTCA GGGCGGTTGT CATATGGAGTACAGG TERM 5330 4240981 - 4240960 - f 90 -15.9 -2.5571 | opp_overlap 4240960 4240963, overlap 4240959 4240958 4240963 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5331 4240960 - 4240981 + F 90 -15.9 -2.63596 | opp_overlap 4240960 4240959 4240958 4240963, overlap 4240963 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5332 4240963 - 4240978 + F 82 -11.8 -3.47078 | opp_overlap 4240963 4240960 4240959 4240958, overlap 4240960 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA TERM 5333 4240978 - 4240963 - f 82 -11.8 -3.41554 | opp_overlap 4240960 4240963, overlap 4240960 4240959 4240958 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA tatD 4240986 - 4241780 + | DNase TatD rfaH 4242265 - 4241777 - | transcriptional activator RfaH TERM 5334 4242844 - 4242832 - g 85 -3.3 -5.4505 | overlap 4242833 CCTGCCAACAAAAAA TCGTC TCT GGCGA TGACGTCGATCTCAA TERM 5335 4243062 - 4243080 + G 70 -6.6 -4.04206 | TGGTGTGCGGCGCAT CCGGGCGA ACG TTTCCCGG TTTCTGTGGCGCTGG yigC 4242432 - 4243925 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 5336 4243930 - 4243918 - f 72 -6.2 -4.24123 | opp_overlap 4243918 4243917 TTAACAACGGTAAAA GCGC CTGAT GCGC GTTAGTTTTGCCCTA fre 4243972 - 4244673 + | FMN reductase TERM 5337 4244702 - 4244684 - T 100 -9.5 -5.03994 | TCTGAGATATAAAAA CCCGCCC CTGAC AGGCGGG AAGAACGGCAACTAA TERM 5338 4244771 - 4244804 + T 76 -11.7 -2.56596 | overlap 4244739 4244778 4244781 GCAATCGGTGCACGA TGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACATTGGTGCAGGA fadA 4246026 - 4244863 - | 3-ketoacyl-CoA thiolase fadB 4248225 - 4246036 - | multifunctional fatty acid oxidation complex subunit alpha TERM 5339 4246949 - 4246974 + g 79 -4 -5.16151 | gap 1, overlap 4246949 4246951 ATGGTTGAAGTGTTA G-ACGCCAGCA CGGTA TCCTGGCGTAC TTTTTGTTCGGTTTC TERM 5340 4248030 - 4248010 - G 76 -3.9 -4.91459 | overlap 4248011 GAACAGGGACAAAAA TTCGGTGAT ATC AGCACCGAC GATAAAGGCTGCTTT TERM 5341 4248343 - 4248321 - H 72 -4.8 -4.60648 | AAAAGATTAAAGAAA TGCCGATC TGATCAC GCTCGGCA GAAATCACGCTCTGG pepQ 4248415 - 4249746 + | proline dipeptidase yigZ 4249743 - 4250360 + | hypothetical protein TERM 5342 4251576 - 4251595 + G 75 -5 -4.84761 | CACTGCCGGAACGTA TCCTCGAA GCCG TTTGGGGA TTTTTCTCCGCCTAT trkH 4250399 - 4251850 + | potassium transporter hemG 4251862 - 4252407 + | protoporphyrinogen oxidase TERM 5343 4254396 - 4254383 - T 75 -6.7 -4.41177 | overlap 4254387 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5344 4254622 - 4254598 - T 71 -8 -3.93061 | gap 1, opp_overlap 4254605 4254617 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCGAATTTT TERM 5345 4255176 - 4255164 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5346 4257664 - 4257643 - T 74 -8.7 -3.91196 | opp_overlap 4257660 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 5347 4257811 - 4257830 + T 100 -13.6 -4.74103 | opp_overlap 4257811 TCAAATTAAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCATTGGCGC TERM 5348 4257830 - 4257811 - T 93 -13.6 -3.58914 | opp_overlap 4257811 TCAAATTAAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCATTGGCGC TERM 5349 4257868 - 4257855 - T 86 -4.5 -5.60993 | opp_overlap 4257860, overlap 4257856 TGGCGCAGAAAAAAA TGCCG GATG CGACA CTGGCGCGTCTTATC mobB 4258410 - 4257898 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 5350 4258198 - 4258223 + g 100 -14.1 -3.85698 | opp_overlap 4258195, overlap 4258213 4258219 TTCCGTCATCAAGGC CCATCGTTGCT GGCT GGCAACGATGG TTTGTGCCGCGCCAG TERM 5351 4258402 - 4258412 + g 71 -3.2 -4.7373 | GGCAAAGGCGAGTAA CGGT ATC ATCG TTTTTCCTGCCATCG mobA 4258991 - 4258407 - | molybdopterin-guanine dinucleotide biosynthesis protein A yihD 4259061 - 4259330 + | hypothetical protein TERM 5352 4260364 - 4260352 - g 72 -6.3 -4.31043 | ATAGAACAGGCAAAA GTTCT ACA AGAAC CCCCTTTACAATTAA yihE 4259407 - 4260393 + | serine/threonine protein kinase dsbA 4260410 - 4261036 + | periplasmic protein disulfide isomerase I SSON_4033 4261566 - 4261063 - | IS1 ORF TERM 5353 4262607 - 4262571 - R 83 -8.9 -4.25104 | gap 1, opp_overlap 4262571 4262572 4262602, overlap 4262573 4262574 TTTTGTTCATTAAAA TACTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA-A CTTACTTATTCTGAC TERM 5354 4262606 - 4262573 - R 100 -14 -3.73042 | opp_overlap 4262572 4262571 4262602, overlap 4262571 4262574 TTGTTCATTAAAATA CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA ACTTACTTATTCTGA TERM 5355 4262605 - 4262574 - R 93 -15.3 -2.83504 | opp_overlap 4262572 4262571 4262602, overlap 4262573 4262571 TGTTCATTAAAATAC TCACTCGCCTCTG CTCATT CAGAGGCGAGTAA AACTTACTTATTCTG yihG 4263541 - 4262609 - | putative endonuclease TERM 5356 4263115 - 4263078 - G 70 -6.3 -4.22554 | gap 1 TGACGTAATAAATAA GCGCGGGA-ATAACGCTT CAT AAACGGCATATCCAGCGC CCAGCACGCCAGGCC TERM 5357 4263384 - 4263369 - G 77 -3.2 -5.10601 | overlap 4263370 ATAAAATCACAAAAA CGCGAA ACCT TTCGCC AAATGACTGGCACAG TERM 5358 4263471 - 4263451 - G 100 -6.9 -5.4833 | overlap 4263454 GGACGGAACAAAAAA TAGTGACCA AAA TGGTCAATA CGATACTCAGCAAAA TERM 5359 4263570 - 4263560 - H 74 -8.2 -3.9122 | overlap 4263547 CAGTGCGCTAAAGAA GCGC AAG GCGC AGATTTTAGCAGAAA TERM 5360 4263735 - 4263712 - H 78 -6.1 -4.56642 | overlap 4263714 AAAAACAAAGACAAA CATCATGCT GTAAAA AGCATGATA ATAAATTAAAAGCGA TERM 5361 4264299 - 4264286 - g 70 -3.7 -4.66833 | overlap 4264287 CGCGAAGCCGAAAAA GCCGG GCGT CCGGT GCTGATCAGCACTGG TERM 5362 4264533 - 4264503 - g 76 -3.8 -5.00616 | GCGTCGGTGAAAAAA CCGCGCAGGCATTG CTG CAAGGTCTTGGCGG GCTGGATACGCTGTA TERM 5363 4264832 - 4264814 - g 70 -5.8 -4.17089 | opp_overlap 4264829 GCCAAAGGGGCAAAA CCAGCCGC GAA GCCGCAGG AAACCAGTGTTGCAG TERM 5364 4265720 - 4265709 - g 81 -7.2 -4.64334 | AACCGCTGAAGAAAA CGCC GGGT GGCG CGCCGTCAACGTCGG polA 4263905 - 4266691 + | DNA polymerase I TERM 5365 4266915 - 4266940 + T 100 -19.1 -5.4505 | opp_overlap 4266908 GCTGAATATTTTAGC CGCCCCAGTCA GTAA TGACTGGGGCG TTTTTTATTGGGCGA yihA 4267705 - 4267073 - | GTPase EngB TERM 5366 4268178 - 4268223 + H 100 -19.3 -3.69341 | opp_overlap 4268190, overlap 4268190 CGTTAAGGGTTATGA GTCAGGAAAAAAGGCGACAGA GTAA TCTGTCGCCTTTTTTCTTTGC TTGCTTTCTGTTAGA TERM 5367 4268190 - 4268211 + H 100 -14.5 -5.72053 | opp_overlap 4268190, overlap 4268178 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG TERM 5368 4268211 - 4268190 - H 100 -14.5 -5.1675 | opp_overlap 4268178 4268190 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG yihI 4268287 - 4268796 + | hypothetical protein TERM 5369 4268919 - 4268878 - f 72 -10.2 -2.91144 | overlap 4268875 4268880 4268901 4268903 TTATTCGTTAAACTA CAG-CGGTTGTCGCGGCGAC AAAA GTGGCTGCG-CAACCGGCTG ATGACCCGAAACGGG TERM 5370 4268958 - 4268901 - f 100 -14.2 -4.36914 | gap 3, overlap 4268880 4268878 4268875 4268903 GTCGCGGCGACAAAA GTGGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCCGC CAGAGACGCCATCGG TERM 5371 4268956 - 4268903 - f 90 -15.4 -2.52946 | gap 3, overlap 4268880 4268878 4268875 4268901 CGCGGCGACAAAAGT GGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCC GCCAGAGACGCCATC hemN 4268985 - 4270358 + | coproporphyrinogen III oxidase TERM 5372 4270403 - 4270367 - T 74 -10.3 -3.24735 | gap 1, opp_overlap 4270363, overlap 4270362 4270360 GATTTAAATAGTGAA TGGCGC-TTCGTTTAC AAAGTA GAAAACGAAAGCGCCA TCAATGTGCTGAGAA glnG 4272179 - 4270770 - | nitrogen regulation protein NR(I) glnL 4273240 - 4272191 - | nitrogen regulation protein NR(II) TERM 5373 4273352 - 4273335 - R 90 -7 -5.28176 | TTGACGGAGAAAAAA GCCCAT GCAGAG ATGGGC TGAAAGTTTCCACGG TERM 5374 4273397 - 4273376 - R 74 -8.6 -3.91911 | overlap 4273377 TCCACGGCAACTAAA TCCCGGCG TTGTTG CGCCGGGT AGTACAACTTCAACT TERM 5375 4273396 - 4273377 - R 78 -12.1 -2.94825 | overlap 4273376 CCACGGCAACTAAAT CCCGGCG TTGTTG CGCCGGG TAGTACAACTTCAAC glnA 4274823 - 4273414 - | glutamine synthetase TERM 5376 4274036 - 4274046 + g 70 -6.8 -4.13945 | CCGGAGCCGTTATCA CCGA ACA TCGG TTTTGGCATAAAGGT TERM 5377 4275043 - 4275029 - H 75 -10 -3.481 | opp_overlap 4275006 4275004 4274991, overlap 4275008 4275006 4275004 4275023 CAATGGAAACATTAA GCACCA TGT TGGTGC AATGACCTTTGGATA yihK 4275322 - 4277019 + | putative GTP-binding factor TERM 5378 4277056 - 4277043 - f 81 -3.7 -5.28176 | overlap 4277045 TTTAGTTATAAAAAA CCTGC CATC GCTGG CTAATGCCGATCAGT TERM 5379 4277109 - 4277134 + F 100 -9.8 -5.61596 | opp_overlap 4277109 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 5380 4277134 - 4277109 - f 72 -9.1 -3.61398 | opp_overlap 4277109 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_4044 4277124 - 4278470 + | IS4 orf TERM 5381 4278481 - 4278452 - T 89 -9.3 -4.59109 | overlap 4278454 4278475 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TAGCCATCGCTGGCA TERM 5382 4278479 - 4278454 - T 100 -16.3 -3.90762 | overlap 4278452 4278475 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAGCCATCGCTGG TERM 5383 4278549 - 4278519 - T 83 -9.8 -4.18018 | opp_overlap 4278524 4278548, overlap 4278524 TTTGCTTATGGAAAA CAAAATCCGCTGAA ATT CCCAGCGGATTTTC CGAAATTTCAATTTC TERM 5384 4278524 - 4278544 + T 76 -8.3 -4.12942 | opp_overlap 4278519 4278524 TTATGGAAAACAAAA TCCGCTG AAATTCC CAGCGGA TTTTCCGAAATTTCA TERM 5385 4278544 - 4278524 - T 100 -9.7 -5.10933 | opp_overlap 4278524, overlap 4278519 TTATGGAAAACAAAA TCCGCTGAA ATT CCCAGCGGA TTTTCCGAAATTTCA yihW 4279351 - 4278563 - | putative DEOR-type transcriptional regulator TERM 5386 4278673 - 4278657 - G 88 -2.1 -5.55664 | GCATCAGTAAAAAAA GCCCTGA CAT TCCGTGC ATTGCCAATTGAAAC TERM 5387 4279515 - 4279544 + r 89 -9.3 -4.59109 | overlap 4279517 GCCTCTTTTGTTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5388 4279517 - 4279542 + r 100 -16.3 -3.90762 | overlap 4279515 CTCTTTTGTTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_4046 4280872 - 4279526 - | IS4 orf TERM 5389 4280862 - 4280887 + g 73 -9.1 -3.61398 | opp_overlap 4280862 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 5390 4280887 - 4280862 - G 100 -9.8 -5.61596 | opp_overlap 4280862 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC yihV 4281725 - 4280922 - | putative kinase yihU 4281898 - 4282776 + | putative dehydrogenase TERM 5391 4283070 - 4283086 + G 71 -2.9 -4.83615 | TAATTCTTGCGGCCT GATTGTC GCT GCCGATC TTTTTATCCCAGGTA yihT 4282801 - 4283688 + | putative aldolase TERM 5392 4283819 - 4283805 - g 88 -11.4 -3.79043 | opp_overlap 4283793 CACCAGGAACTTAAA CCGCAC GAA GTGCGG ATTGCGCCTGTGTTC rspB 4283721 - 4284731 + | putative dehydrogenase TERM 5393 4285051 - 4285082 + G 71 -9.6 -3.53012 | gap 1, opp_overlap 4285037 4285079, overlap 4285037 4285039 4285078 TCGCCGCGTTAATTG GCGGTTTATTA-GCG AAC CGAGTAATAAACCGC TTTGGGCAAAAGCGG TERM 5394 4285097 - 4285079 - g 78 -8.9 -4.26871 | opp_overlap 4285051 4285078 GAACCGAGTAATAAA CCGCTTT GGGCA AAAGCGG GCATTTATTATTGGC SSON_4051 4284801 - 4286234 + | putative transporter TERM 5395 4286273 - 4286232 - f 100 -20.5 -4.2528 | opp_overlap 4286240, overlap 4286236 GCTGAATTGAAGAAA TAAATTAATGCGCATCGGC TTAA ACCGATGCGCATTAATTCA AACTGCCCACGTTTA TERM 5396 4286269 - 4286236 - f 100 -19.1 -4.70117 | opp_overlap 4286240, overlap 4286232 AATTGAAGAAATAAA TTAATGCGCATCGGC TTAA ACCGATGCGCATTAA TTCAAACTGCCCACG TERM 5397 4286240 - 4286265 + F 93 -14.8 -3.34895 | opp_overlap 4286236 4286232 GAAGAAATAAATTAA TGCGCATCGG CTTAAA CCGATGCGCA TTAATTCAAACTGCC TERM 5398 4286847 - 4286861 + G 73 -4.2 -4.86133 | overlap 4286849 CGTCTGTGGGTATTA TGCTGG CAA CCGGTA TTTTTGCTCTCTGTA TERM 5399 4287285 - 4287313 + G 76 -7.4 -4.26832 | AAAGTCTGTATTTGT CGGGAGCAGGAT TTTGT GTCCTGTTCGCG TTTCCTTTCTTCTTA shiA 4286333 - 4287682 + | putative transport protein shikimate SSON_4053 4287672 - 4288559 + | hypothetical protein yihX 4288700 - 4289299 + | phosphatase rbn 4289293 - 4290165 + | ribonuclease BN yihZ 4290162 - 4290599 + | D-tyrosyl-tRNA deacylase yiiD 4290596 - 4291585 + | putative acetyltransferase TERM 5400 4291592 - 4291615 + T 73 -11 -2.61452 | overlap 4291591 4291594 GAAGAGTAGCTTATG GAGAGGGGCG GTGC TGCCTCTCTC ATTCATTCCGGTCAT SSON_4058 4292150 - 4291647 - | IS1 ORF TERM 5401 4292886 - 4292913 + H 72 -10.6 -2.79133 | opp_overlap 4292886, overlap 4292888 CGATGAGCAAGTAAA GACCGGTTGGTG GCAG TACTGACCGGTC TGTGATGAAAGATTA yiiF 4293217 - 4293459 + | hypothetical protein TERM 5402 4293481 - 4293470 - T 75 -3 -5.09426 | overlap 4293473 GGTAATGGGAAAAAA TGAT GTCA ATCA GATTGCTGACAACGT TERM 5403 4293501 - 4293530 + T 77 -10.7 -3.30124 | overlap 4293491 GCTGACAACGTGCGC GTTGTTCATGCCG GATG CGGCGTGAACGCC TTATCCGGCCTACAA fdhE 4294718 - 4293789 - | formate dehydrogenase accessory protein FdhE TERM 5404 4294647 - 4294666 + g 70 -10.7 -2.71325 | opp_overlap 4294647, overlap 4294644 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG TERM 5405 4294666 - 4294647 - G 86 -10.7 -3.97307 | opp_overlap 4294647 4294644 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4295350 - 4294715 - | formate dehydrogenase-O subunit gamma fdoH 4296249 - 4295347 - | formate dehydrogenase-O, iron-sulfur subunit TERM 5406 4295658 - 4295669 + g 70 -5.8 -4.28018 | overlap 4295655 GCTCAGCAACGCGCT CGCT CGCC AGCG TTTTCATCGACTCTT TERM 5407 4296064 - 4296039 - G 73 -11.3 -2.71791 | gap 1, opp_overlap 4296039, overlap 4296038 4296041 ATTTGGCGCTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA TERM 5408 4296039 - 4296064 + g 85 -11.3 -3.61715 | gap 1, opp_overlap 4296039 4296038 4296041 ATTTGGCGCTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA fdoG 4299312 - 4296262 - | formate dehydrogenase-O, major subunit TERM 5409 4298856 - 4298866 + g 77 -8.2 -4.10657 | AGCGGTTAACAGTCA CGCC TTC GGCG TTTTGCGCAATGTAG fdhD 4299506 - 4300339 + | formate dehydrogenase accessory protein TERM 5410 4300380 - 4300346 - f 100 -11.6 -4.50193 | opp_overlap 4300346 4300349 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 5411 4300346 - 4300380 + F 93 -13.8 -3.5782 | opp_overlap 4300346, overlap 4300349 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 5412 4300349 - 4300377 + F 87 -11.1 -3.91541 | opp_overlap 4300346, overlap 4300346 AATTAATTAAAATAA GTCCTGCGATATA TAT TAAATTGCAGGAC TTATTCATTTCGTGA TERM 5413 4300381 - 4300393 + F 75 -2.7 -5.14949 | AAATTGCAGGACTTA TTCAT TTC GTGAA TTTTATTATTTTATT SSON_4066 4301497 - 4302000 + | IS1 ORF TERM 5414 4302358 - 4302326 - T 90 -10.5 -4.25104 | overlap 4302327 4302330 CGTTTTTGATGAAAA TGCAGTGTCGGATGC GGC GCATCCGACACAGTT CACCCCTTGTGAAGT TERM 5415 4302357 - 4302327 - T 86 -14 -3.14848 | overlap 4302326 4302330 GTTTTTGATGAAAAT GCAGTGTCGGATGC GGC GCATCCGACACAGT TCACCCCTTGTGAAG TERM 5416 4302354 - 4302330 - T 100 -18.7 -2.77781 | overlap 4302327 4302326 TTTGATGAAAATGCA GTGTCGGATGC GGC GCATCCGACAC AGTTCACCCCTTGTG frvR 4304106 - 4302358 - | putative frv operon regulatory protein TERM 5417 4303193 - 4303183 - G 72 -8.2 -3.85539 | opp_overlap 4303184 4303185, overlap 4303184 CAGACTCATATCAAA GGCC GCA GGCC AGGCGGCTTTCAGGT TERM 5418 4304019 - 4303997 - G 74 -10.6 -3.14125 | overlap 4303995 TTGAGATAGTCAATA TCACGCAGGA TGG TCCTGCCTGA AACGCCAGTCTGTTG frvX 4305176 - 4304106 - | putative fructose-specific phosphotransferase system protein FrvX TERM 5419 4304879 - 4304849 - G 76 -11.2 -3.37344 | opp_overlap 4304857, overlap 4304850 4304852 GTGCGACGGAACCAA TCACACCAGGGATT TTA AATCCCTTGTGTGT GCGTATGGTTACCCG TERM 5420 4304878 - 4304850 - G 90 -14.7 -2.62192 | opp_overlap 4304857, overlap 4304849 4304852 TGCGACGGAACCAAT CACACCAGGGATT TTA AATCCCTTGTGTG TGCGTATGGTTACCC TERM 5421 4304876 - 4304852 - G 75 -11.5 -2.8507 | opp_overlap 4304857, overlap 4304850 4304849 CGACGGAACCAATCA CACCAGGGATT TTA AATCCCTTGTG TGTGCGTATGGTTAC frvB 4306623 - 4305166 - | putative PTS transporter components IIBC TERM 5422 4306205 - 4306195 - G 74 -8.2 -3.96327 | opp_overlap 4306195 4306197, overlap 4306181 4306178 4306196 ACCGCCGATGACAAA CGGC AGC GCCG CAGAGACGCCCGCCA frvA 4307074 - 4306628 - | putative fructose-like phosphotransferase system subunit EIIA TERM 5423 4307237 - 4307253 + r 70 -2.3 -5.05228 | AACCACATGAATCAT TAATGGG TTA TTCATTA TTTTTGTGATTTACT TERM 5424 4307366 - 4307343 - R 74 -11 -2.86093 | opp_overlap 4307345, overlap 4307342 4307340 CGAAATTTAAAATAT TGTGCCGGAG GCAT CTCTGGCACA TTGGGCAATTACGGC yiiL 4307689 - 4307375 - | hypothetical protein rhaD 4308523 - 4307699 - | rhamnulose-1-phosphate aldolase rhaA 4310024 - 4308765 - | L-rhamnose isomerase TERM 5425 4309256 - 4309240 - G 74 -10.1 -3.53444 | TCAGTCGGGTGGAAA TGCCCGG CGT CCAGGCA CAGCGCAGTCTGGCG rhaB 4311490 - 4310021 - | rhamnulokinase rhaS 4311778 - 4312614 + | transcriptional activator RhaS TERM 5426 4313491 - 4313516 + T 70 -10.5 -2.52464 | opp_overlap 4313488 4313487, overlap 4313496 TACCCGGGAAACCGG GATGACGCC CAGCCAGT GGCGTCATC TCAATTCGCAGAAAG rhaT 4314567 - 4313533 - | rhamnose-proton symporter TERM 5427 4315223 - 4315209 - g 75 -5.6 -4.6902 | opp_overlap 4315209 GCAGAATTTGAAAAA GCGGCA GCT TCCCGC TTTGGTTCCGGCTGG sodA 4314852 - 4315472 + | superoxide dismutase TERM 5428 4315552 - 4315526 - f 78 -5 -5.06451 | opp_overlap 4315530, overlap 4315530 TATCAGCTTAAAAAA TGAACCATCGCC AAC GGCGGTGGTTTT TTTGTGATCAATTTC TERM 5429 4315548 - 4315530 - f 84 -10.2 -3.93769 | opp_overlap 4315530, overlap 4315526 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5430 4315530 - 4315548 + F 100 -12.4 -5.67063 | opp_overlap 4315530 4315526 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5431 4315609 - 4315595 - f 71 -3.6 -4.86001 | ATGATCCGATAAAAA TAAAAC AGC GTTTCA ATTGATGTGGTTTTG TERM 5432 4315771 - 4315760 - g 72 -5.8 -4.42386 | opp_overlap 4315764 4315766 GCTCGATTGAGAAAA TCCC GGGG GGGA TGATGCTCGTCCCGC kdgT 4315732 - 4316715 + | 2-keto-3-deoxygluconate permease TERM 5433 4316739 - 4316762 + F 95 -13.2 -3.94853 | CCTTAATCCCCACAG CCGGATGAAC TAAC GTTCGTCCGG TTTGCTATTGAGTTC yiiM 4316864 - 4317538 + | hypothetical protein TERM 5434 4317576 - 4317562 - T 73 -10 -3.30124 | opp_overlap 4317565, overlap 4317565 GTGTAGGCCTGATAA GACGCT ATC AGCGTC GCATCAGGCATCCTG TERM 5435 4317654 - 4317636 - T 77 -8.8 -3.86015 | opp_overlap 4317637, overlap 4317637 TATCCTGCCTACAAA TGCGGAGT TTA ACTCCGCT TATACAGCGGCAACC TERM 5436 4317637 - 4317653 + T 81 -12.3 -3.28712 | opp_overlap 4317636 4317637 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC TERM 5437 4317653 - 4317637 - T 79 -12.3 -2.91395 | opp_overlap 4317637, overlap 4317636 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC cpxA 4319017 - 4317644 - | two-component sensor protein TERM 5438 4318301 - 4318291 - G 70 -6.8 -4.05389 | overlap 4318296 GAGAGATATCAGAAA GCAG ACG CTGC TGAGAGGTCATCATG cpxR 4319712 - 4319014 - | DNA-binding transcriptional regulator CpxR cpxP 4319862 - 4320362 + | periplasmic repressor CpxP TERM 5439 4320404 - 4320420 + F 100 -12.3 -5.9873 | ACCATCCCTGTCTTC CCCCACA TGA TGTGGGG TTTTTTTTATCCTCA TERM 5440 4321034 - 4321048 + G 72 -10 -3.30106 | overlap 4321033 4321031 4321041 GTCCTGGTACGGCTG GCATCG CGC CGATGC TCTGTTTGCATTGGG fieF 4320510 - 4321412 + | ferrous iron efflux protein F TERM 5441 4321651 - 4321621 - g 76 -11.1 -3.28712 | opp_overlap 4321646, overlap 4321646 TCGGTGTGTTGACAA GCGGCGGTGATGC GCCAG GCATGAACGCCGC AATTCGCGGGGTTGT TERM 5442 4321881 - 4321869 - g 77 -3.3 -5.15117 | GAAAACCTGAAAAAA CGTGG TAT CGACG CGCTGGTGGTTATCG TERM 5443 4322249 - 4322238 - g 93 -5.8 -5.22039 | overlap 4322240 4322241 GCGAAAGGTAAAAAA CACG CGAT CGTG GCGATTACCGAACAT pfkA 4321593 - 4322555 + | 6-phosphofructokinase TERM 5444 4322637 - 4322611 - f 78 -5 -4.96646 | overlap 4322612 TGACAGAAGCAAAAA TGCCTGATGCGC TTC GCTTATCAGGCC TACATGAATTCTGCA TERM 5445 4322741 - 4322757 + F 93 -9.4 -4.7497 | opp_overlap 4322738 4322741 TTGTCAGCAATATGA GGCGGA TTTCT TCCGCC TTTTTAATCCCTCAA TERM 5446 4323647 - 4323631 - g 84 -3.6 -5.24129 | overlap 4323633 4323642 GTGGTCGAGAAAAAA GGCACC AAAGA GGTGGC GGAAGCCTACCTGAA sbp 4322875 - 4323864 + | sulfate transporter subunit TERM 5447 4323887 - 4323909 + F 93 -6.9 -5.72622 | opp_overlap 4323887 AGGATAATTATCAAA CCCGGTGGT TTCTC GCGACCGGG TTTTTTATTTGTCAC cdh 4323971 - 4324726 + | CDP-diacylglycerol pyrophosphatase TERM 5448 4324771 - 4324749 - T 90 -13.5 -3.6187 | overlap 4324745 AGTTAAGGAAAGTAA GTGCCGGAT ATGAA ATCCGGCAC CTGTCAGACTTAAGC tpiA 4325548 - 4324781 - | triosephosphate isomerase yiiQ 4326255 - 4325656 - | hypothetical protein TERM 5449 4326248 - 4326235 - G 88 -2.3 -5.53436 | ACATAAGAGAAAAAA CAGCG TACA CCCTG GCTTCATTGACAGTA yiiR 4326356 - 4326796 + | hypothetical protein TERM 5450 4326824 - 4326871 + F 93 -16 -2.84566 | gap 1, overlap 4326821 CTCTTACTGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAATGACAATACCCGGAAAA TCCTTCTGAACTCTT yiiS 4327008 - 4327307 + | hypothetical protein TERM 5451 4327526 - 4327504 - g 76 -10.8 -3.41024 | opp_overlap 4327498, overlap 4327499 4327502 CCCTGCAACAGAAGA TATTCTTCAA TTG TTGAAGAATA AGTCGGATAACAAGC TERM 5452 4327599 - 4327583 - g 70 -3.6 -4.66537 | overlap 4327578 4327585 TGGCCGAAGACAAAA CTGCGT ATTGA ACGCGG AGAAATGCCGGAAAC yiiT 4327334 - 4327762 + | universal stress protein UspD fpr 4328513 - 4327767 - | ferredoxin-NADP reductase TERM 5453 4327793 - 4327833 + g 72 -10.3 -3.35224 | overlap 4327791 GCTCCGCTGTCATAT GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC TCTTTCAGCAACTGT TERM 5454 4328237 - 4328223 - G 70 -5.7 -4.30719 | TTCCTCCAGAACAAA GAAGC CAGCT GCTTC GCTAACCACCTGCAC TERM 5455 4328589 - 4328568 - R 100 -13.1 -5.7946 | CTCCGAACAAAAAAA TTCCAGTCC CGAA GGACTGGAA GGCTCAATCGATCAA glpX 4329620 - 4328610 - | fructose 1,6-bisphosphatase II TERM 5456 4329513 - 4329531 + g 95 -9.5 -4.83169 | opp_overlap 4329500 4329499 ACGCATGGCGTTTAC CGCCGCG CCGTC CGCGGTG TTTTTATCGCCGCGT TERM 5457 4329686 - 4329707 + r 93 -13.7 -3.55444 | overlap 4329687 GAGGGATTATTGATG TGTGCGGGG TTGC CCCCGCACG TTTCGGGACTACCGG TERM 5458 4329687 - 4329706 + r 90 -15 -2.73124 | overlap 4329686 AGGGATTATTGATGT GTGCGGGG TTGC CCCCGCAC GTTTCGGGACTACCG glpK 4331282 - 4329750 - | glycerol kinase TERM 5459 4329781 - 4329794 + g 74 -3.1 -5.02074 | gap 1, overlap 4329772 TCTTCCCACGCCATC GCGCGT TTA AC-CGC TTTTTTCCAGCCTGC TERM 5460 4330235 - 4330245 + g 72 -6.8 -4.25074 | opp_overlap 4330235, overlap 4330243 CCGGAACCACATACA CACC ATT GGTG TTTTGCACTTTGGTG glpF 4332129 - 4331284 - | facilitated diffusion of glycerol TERM 5461 4332681 - 4332665 - g 74 -2.9 -5.01858 | GAAAGAAAAAAACAA CTCACTG TCG CAGGAAG TTCAAAATGCCCAGC yiiU 4332555 - 4332800 + | hypothetical protein TERM 5462 4332862 - 4332877 + T 93 -10.4 -4.3953 | opp_overlap 4332862 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA TERM 5463 4332877 - 4332862 - T 100 -10.4 -5.31456 | opp_overlap 4332862 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA menG 4333370 - 4332885 - | ribonuclease activity regulator protein RraA menA 4334389 - 4333463 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5464 4334425 - 4334408 - R 100 -9.1 -5.06816 | opp_overlap 4334395, overlap 4334395 ACGCGCCAATAAAAA TGGGGCC TTTC AGCCCCA TCAAACAATGATGAA hslU 4335787 - 4334456 - | ATP-dependent protease ATP-binding subunit hslV 4336327 - 4335797 - | ATP-dependent protease peptidase subunit TERM 5465 4336382 - 4336363 - R 100 -13.6 -4.05991 | overlap 4336350 4336356 AATACAGAGTACAAA CCCCGTAC AAAA GTACGGGG CATAATGCAATTATA ftsN 4337379 - 4336420 - | essential cell division protein TERM 5466 4336836 - 4336847 + g 70 -5.8 -4.21974 | overlap 4336846 GCGACGTACGCGTCT GCTG CTGC CAGC TTTGTTCAGTCGTAC TERM 5467 4336932 - 4336948 + g 70 -10.1 -3.23853 | overlap 4336923 4336930 GTTGTAGCGTTTGCT GACGCTG TTC CGGCGTC TGTTCATTCCACGGA cytR 4338496 - 4337471 - | DNA-binding transcriptional regulator CytR priA 4340850 - 4338652 - | primosome assembly protein PriA TERM 5468 4339140 - 4339122 - G 74 -10.2 -3.53444 | overlap 4339133 CGACCTGGGTGTAAA GCTGAGCG AAA CGCTCTGC CGAGCGAAAATCGGC TERM 5469 4339707 - 4339735 + g 76 -7.9 -4.29153 | CCGGACGCGCATTCC CCGCCCGGCGCGT CAG GCGCAGCAGGCGG TATTTTTTCTGCTGG rpmE 4341053 - 4341265 + | 50S ribosomal protein L31 TERM 5470 4341285 - 4341298 + F 100 -9.5 -5.65177 | opp_overlap 4341285 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGT TERM 5471 4341298 - 4341285 - f 100 -9.5 -5.02074 | opp_overlap 4341285 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGT TERM 5472 4342221 - 4342239 + G 75 -6.7 -4.30844 | gap 1, overlap 4342224 AGCAGGCCATTTCCG GCGGGACG GAAC CGTCC-GC TTTTCCTGATACCCT SSON_4106 4341425 - 4342309 + | hypothetical protein SSON_4107 4342300 - 4342635 + | hypothetical protein TERM 5473 4343564 - 4343544 - g 77 -9.7 -3.59979 | overlap 4343548 4343558 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 5474 4343560 - 4343548 - g 75 -6.9 -4.44046 | overlap 4343544 4343558 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_4108 4342722 - 4343894 + | IS21 ORF1 SSON_4109 4343894 - 4344691 + | IS21 ORF2 TERM 5475 4344927 - 4344949 + G 70 -5.6 -4.34402 | gap 1, opp_overlap 4344889 TCACGCGCATCACCA CGCCGGATG GCAGGG CATC-GGCG TTTTACTATAACCAC SSON_4110 4344785 - 4345696 + | hypothetical protein TERM 5476 4345736 - 4345758 + T 85 -12.8 -3.38272 | TTTCCTTGCTTTAGT CTCCAGTCAT TTA ATGGCTGGAG TTATGGGTGATGATA yiiX 4347535 - 4346927 - | putative peptidoglycan peptidase TERM 5477 4347506 - 4347527 + g 85 -7.3 -4.81083 | opp_overlap 4347502 4347503 4347505, overlap 4347505 4347511 AGGTACAGAAACCAG CAGGCTG AGGATCAG CAGCCTG TTTTTCATAGTTAAA metJ 4348036 - 4347719 - | transcriptional repressor protein MetJ TERM 5478 4348613 - 4348669 + G 76 -7.4 -4.24413 | gap 2, opp_overlap 4348652, overlap 4348616 4348617 4348647 GCGCCGCACGACTGC TACGGCGGTAGCTATCGCCTGTTCGACA GTC TGGCGAA-ACGCGGTTGCTATCGC-GTG TTGTTTGTTGATCAA TERM 5479 4348617 - 4348666 + G 73 -11.5 -2.81784 | gap 1, opp_overlap 4348652, overlap 4348616 4348613 4348647 CGCACGACTGCTACG GCGGTAGCTATCGCCTGTTCGACA GTC TGGCGAA-ACGCGGTTGCTATCGC GTGTTGTTTGTTGAT TERM 5480 4348647 - 4348672 + G 70 -6.1 -4.24342 | opp_overlap 4348652, overlap 4348617 4348616 4348613 TGTTCGACAGTCTGG CGAAACGCGGT TGCT ATCGCGTGTTG TTTGTTGATCAAGGC metB 4348313 - 4349473 + | cystathionine gamma-synthase TERM 5481 4351208 - 4351195 - g 76 -8.1 -4.1711 | ATCAGCGCCAACAAA CTGGC GGGA GCCAG CGACAGCAATAAATA metL 4349476 - 4351908 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 5482 4352059 - 4352081 + F 100 -12 -5.42605 | AGTTTATATTTGCAG TCCGGTTTGC TTT GCATACCGGA TTTTCTTTTTCTTAC metF 4352257 - 4353147 + | 5,10-methylenetetrahydrofolate reductase TERM 5483 4353222 - 4353260 + F 71 -10.4 -2.60392 | overlap 4353219 4353224 4353233 GCTGCCTCGAAATGA GGGCGGGAAAATAAGGTT GTC AGCCTTGTTTTCTCCCTC ATTACTTGAAGGATA katG 4353476 - 4355656 + | catalase TERM 5484 4355666 - 4355698 + F 100 -25.1 -4.41616 | CTGTAATCTGACCTT CTTCAGCGACTGCCT TTC AGGCAGTCGCTGAAG TTTCTTTACCGGCGT TERM 5485 4356146 - 4356157 + G 77 -7.2 -4.53398 | TTCGCGATACTGATT GCCG CTTT CGGC TTATTTTTGGTGTTG yijE 4355717 - 4356655 + | hypothetical protein yijF 4357299 - 4356682 - | hypothetical protein TERM 5486 4357531 - 4357572 + r 75 -9.6 -3.65201 | gap 1, opp_overlap 4357543, overlap 4357536 4357543 AGCGCATCAGGCAAT TTTGCGTTCAAACTCCCGG ACAAG CCGGGAGTTTGGA-GTAGG TTATTCCCACTCTTG TERM 5487 4357536 - 4357568 + r 78 -12.8 -2.65808 | opp_overlap 4357543, overlap 4357531 4357543 ATCAGGCAATTTTGC GTTCAAACTCCCGG ACAAG CCGGGAGTTTGGAG TAGGTTATTCCCACT TERM 5488 4357543 - 4357561 + r 86 -11.7 -3.62418 | opp_overlap 4357543, overlap 4357536 4357531 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT TERM 5489 4357561 - 4357543 - R 86 -11.7 -3.53343 | opp_overlap 4357536 4357531 4357543 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT gldA 4358676 - 4357573 - | glycerol dehydrogenase talC 4359349 - 4358687 - | fructose-6-phosphate aldolase TERM 5490 4358864 - 4358852 - G 71 -9.1 -3.53091 | ACGCGGCGTTTTAAA GCTGG CTG CCAGC ACCATGCTTTCTGGC ptsA 4361496 - 4359361 - | PEP-protein phosphotransferase system enzyme I TERM 5491 4360298 - 4360311 + g 87 -4.5 -5.27335 | overlap 4360299 TTACGTAGTTGCTGT TTGGC TTCT GCCAG TTTTTCTTTCACCCA TERM 5492 4361706 - 4361717 + H 71 -7.2 -4.19506 | opp_overlap 4361706 TATCGGTGCCAATCA GCGC AAGG GCGC TTTTGGCGTTGCCCT TERM 5493 4362032 - 4362042 + H 70 -2.4 -4.93898 | TATCGCAAGTTATGA GGCG GAT CGCA TTTTTGTACTGATAT frwC 4362171 - 4363250 + | putative fructose-like permease EIIC subunit 2 TERM 5494 4363594 - 4363611 + F 74 -10.5 -3.27525 | CGCTTAAGTTCTTCT CCCGCTC GCAA GGGCGGG TTCGCTTTCCCACAG TERM 5495 4364023 - 4363999 - f 78 -6.6 -4.59773 | gap 1, opp_overlap 4363976 CCGTACTGGGAAAAA CGTTCGATGAA AGAT TTCATC-AACG GGCAGATGACAGATG TERM 5496 4364367 - 4364382 + F 77 -9 -3.8512 | opp_overlap 4364356 4364355 TAAGCCGCAGACGTT CTGGCA GGCG TGCCAG TTATTCTGGTACATG TERM 5497 4366153 - 4366167 + G 71 -9.2 -3.55801 | opp_overlap 4366153, overlap 4366154 CGTGATGCGGATGAA TGCCCC TCC GGGGCG TTTGAACGGATTGGT TERM 5498 4366154 - 4366166 + G 70 -10.5 -2.73159 | opp_overlap 4366153, overlap 4366153 GTGATGCGGATGAAT GCCCC TCC GGGGC GTTTGAACGGATTGG pflC 4365898 - 4366776 + | pyruvate formate lyase II activase frwD 4366778 - 4367119 + | putative fructose-like phosphotransferase EIIB subunit 3 yijO 4367957 - 4367106 - | putative ARAC-type regulatory protein TERM 5499 4367628 - 4367590 - G 70 -4.4 -4.46212 | opp_overlap 4367599 4367606 4367610 GTTTGTAGCAGAAAA GAACCTATACGTGGGCCG CGT CGGGCGACGTGTTGCTTC GCCAGATTTTGATAT TERM 5500 4367610 - 4367634 + g 74 -6.3 -4.52347 | opp_overlap 4367590, overlap 4367599 4367606 TATACGTGGGCCGCG TCGGGCGACGT GTT GCTTCGCCAGA TTTTGATATTGTTTG TERM 5501 4368031 - 4368011 - R 91 -7.6 -5.1861 | gap 1, overlap 4367995 GGCATTATTAAAAAA GGCCAC-CT GAAA AGTGTGGCC TGAGGGGAGTTCGAT TERM 5502 4368131 - 4368087 - R 100 -17.3 -3.53811 | opp_overlap 4368079, overlap 4368128 CGGATGTGGCGTAAA CGCCTTATCCAGCCTACCG CCGCGAT CTGTAGGCCGGATAAGACG CGTCAAGCGTCGCAT yijP 4369905 - 4368172 - | hypothetical protein TERM 5503 4369853 - 4369837 - G 75 -4.3 -4.84033 | opp_overlap 4369847, overlap 4369840 AGAGAAAAACCAAAA GTAGAGC AGT GCCCAAC CCAGGGCTTTCCAGC TERM 5504 4370070 - 4370049 - R 100 -13.7 -4.41206 | opp_overlap 4370049 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGAAGAGGAA TERM 5505 4370049 - 4370070 + r 82 -11.5 -3.53012 | opp_overlap 4370049 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGAAGAGGAA ppc 4372739 - 4370088 - | phosphoenolpyruvate carboxylase TERM 5506 4372992 - 4373023 + r 77 -11.6 -2.76696 | opp_overlap 4373001 4373003 4373013, overlap 4372991 ACACCAAAGGTGTAG GTCGGATAAGATGC GCAA GCATCGCATCCGAC ATTATTGCGGCACCG TERM 5507 4373050 - 4373088 + r 87 -9.5 -4.25104 | gap 1, opp_overlap 4373028 4373013, overlap 4373053 ACCGGAGTTTGGCAA CG-GTGCCGGATGCGGCG CGAG CGCCTTATCCGGCCTACG TTTTAATGCCAGCAA TERM 5508 4373053 - 4373084 + r 79 -12.2 -2.77781 | opp_overlap 4373028 4373013, overlap 4373050 GGAGTTTGGCAACGG TGCCGGATGCGGCG CGAG CGCCTTATCCGGCC TACGTTTTAATGCCA argE 4374242 - 4373091 - | acetylornithine deacetylase TERM 5509 4374320 - 4374302 - H 73 -2.4 -5.14163 | ATTTATGAATAAAAA TACACTAA CGT TGAGCGTA ATAAAACCCACCAGC argC 4374396 - 4375400 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5510 4375680 - 4375667 - g 71 -2.3 -4.90525 | GAACGGCAAATAAAA CCCTG TTGG CATGG GCGAAGAAACATCAG argB 4375411 - 4376184 + | acetylglutamate kinase argH 4376245 - 4377618 + | argininosuccinate lyase TERM 5511 4377643 - 4377661 + F 100 -9.5 -5.24129 | TATGTACAAATTTGA GCCTGGC TTATC GCCGGGC TTTTTTATGGCAAAA TERM 5512 4377699 - 4377681 - f 100 -11 -5.78622 | TTATGGCAAAAAAAA GCGGATCC TGG AGATCCGC AAAAGTTCACGTTGG oxyR 4377885 - 4378802 + | DNA-binding transcriptional regulator OxyR udhA 4380185 - 4378785 - | soluble pyridine nucleotide transhydrogenase TERM 5513 4380241 - 4380216 - H 89 -9.1 -4.60797 | TTCTTATACATAAAA GCAACAGAATG GTAA CATTCTATCGC GGGTAAGCCAATTGA TERM 5514 4380554 - 4380540 - g 100 -2.7 -6.01725 | opp_overlap 4380549 AACAAAAAGAAAAAA CCCGC CGTTC GCTGG TGGAAGCCGCATTTA TERM 5515 4381136 - 4381122 - g 73 -4.2 -4.79752 | GTGAACAAGAGAAAA CCGCAA TTA TTCCGG GAAATGTGAAGGACG yijC 4380452 - 4381156 + | DNA-binding transcriptional repressor FabR TERM 5516 4381351 - 4381364 + G 73 -3.7 -4.77567 | GTAGGCTTGCCGGGT CTGGC AGCT GCCTG TTTTATTCTCGGCGT yijD 4381156 - 4381515 + | hypothetical protein TERM 5517 4381521 - 4381552 + T 100 -11.6 -4.41494 | overlap 4381522 4381525 TGCTGAGTAATCGGT ATTATGCCGGATGC TGGC GCATCCGGCATGGG TTTTACTTCGCGGTC TERM 5518 4381522 - 4381551 + T 100 -15.1 -3.24414 | overlap 4381521 4381525 GCTGAGTAATCGGTA TTATGCCGGATGC TGGC GCATCCGGCATGG GTTTTACTTCGCGGT TERM 5519 4381525 - 4381548 + T 100 -16.8 -2.80479 | overlap 4381522 4381521 GAGTAATCGGTATTA TGCCGGATGC TGGC GCATCCGGCA TGGGTTTTACTTCGC trmA 4382655 - 4381555 - | tRNA (uracil-5-)-methyltransferase TERM 5520 4381619 - 4381646 + g 74 -9.8 -3.45839 | opp_overlap 4381619 4381617 AACTGATCAAACAGA GCCAGACGTTCG ACCT TGTGCGTCTGGC TTAATGTTTCCAGAT TERM 5521 4383487 - 4383469 - gH 70 -9.6 -3.01712 | GCGGGGTGGTGAATA TCATCACG ACG CGCGATGA ACCCGGAACGGAAAT btuB 4383024 - 4384868 + | vitamin B12/cobalamin outer membrane transporter TERM 5522 4384876 - 4384911 + GF 95 -14 -3.41125 | gap 1, opp_overlap 4384873, overlap 4384878 CCTTCTGAACCACGT CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG TTGTCGGTCTATGAC TERM 5523 4385611 - 4385659 + GF 87 -10.4 -4.18094 | gap 1, opp_overlap 4385608 4385611, overlap 4385612 GAAGCTGAACAATTA TTGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCAG TTTTAGGCTGATTTG TERM 5524 4385612 - 4385658 + GF 78 -11.7 -3.10134 | gap 1, opp_overlap 4385611 4385608, overlap 4385611 AAGCTGAACAATTAT TGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCA GTTTTAGGCTGATTT murI 4384813 - 4385670 + | glutamate racemase TERM 5525 4387655 - 4387642 - f 75 -6.7 -4.41177 | overlap 4387646 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5526 4387881 - 4387857 - f 71 -8 -3.93061 | gap 1, opp_overlap 4387864 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5527 4388435 - 4388423 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5528 4390923 - 4390902 - f 74 -8.7 -3.91196 | opp_overlap 4390919 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 5529 4391089 - 4391070 - f 93 -13.6 -3.58914 | opp_overlap 4391070 TCAAATTAAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCGTTTCTAC TERM 5530 4391070 - 4391089 + F 100 -13.6 -4.84529 | opp_overlap 4391070 TCAAATTAAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCGTTTCTAC murB 4391188 - 4392216 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 5531 4392571 - 4392589 + G 81 -9.6 -4.08064 | opp_overlap 4392580, overlap 4392557 4392581 GCCGTGGTCGCCGGG GGCGGAAA TGG TTTTCGCC TTTTGGCGCAAACTT TERM 5532 4392581 - 4392602 + G 74 -8.7 -3.90766 | opp_overlap 4392580, overlap 4392571 CCGGGGGCGGAAATG GTTTTCGCC TTTT GGCGCAAAC TTATATTTGTCGATG birA 4392213 - 4393178 + | biotin--protein ligase TERM 5533 4393200 - 4393183 - T 88 -8.4 -4.80417 | CAGAAAAATAAGAAA GGGGAG TATTCG CTCCCC TGCAAATTATTTGCG coaA 4394157 - 4393207 - | pantothenate kinase SSON_4148 4394499 - 4394344 - | hypothetical protein TERM 5534 4394759 - 4394747 - H 73 -7.7 -4.15222 | opp_overlap 4394743 ACCGGCTCGAATAAA GAGAG CTT CTCTC GATATTCAGTGCAGA TERM 5535 4395121 - 4395105 - g 70 -4.4 -4.4715 | gap 1, opp_overlap 4395105 TTTGAACGTACAAAA CCGCACG TTAA CGT-CGG TACTATCGGCCACGT tufB 4395075 - 4396259 + | elongation factor Tu TERM 5536 4396323 - 4396282 - f 88 -14.5 -3.0792 | opp_overlap 4396283 4396294, overlap 4396294 TAACATTTGACGCAA TGCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGCT TTCGTACCAGAACCT TERM 5537 4396283 - 4396322 + F 100 -13.6 -3.72576 | opp_overlap 4396282 4396294, overlap 4396294 AACATTTGACGCAAT GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC TTTCGTACCAGAACC TERM 5538 4396311 - 4396294 - f 91 -11.3 -4.2679 | opp_overlap 4396283 4396294, overlap 4396282 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5539 4396294 - 4396311 + F 95 -11.3 -4.60924 | opp_overlap 4396294 4396282, overlap 4396283 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5540 4396692 - 4396681 - g 70 -4.4 -4.5442 | opp_overlap 4396681 CTGTTAACGACAAAA GGTA AAGC TACC GTTGCTTTTGCCCGT TERM 5541 4396781 - 4396795 + G 73 -11.4 -2.65264 | CCACGCTGATTGTGG CTGCGG TTA CCGCAG TAATGTCACTGATCC secE 4396489 - 4396872 + | preprotein translocase subunit SecE nusG 4396874 - 4397419 + | transcription antitermination protein NusG TERM 5542 4397454 - 4397436 - f 75 -3 -5.1675 | CCAGCGATCAAAAAA GCGGCGAT TTA ATCGTTGC ACAAGGCGTGAGATT TERM 5543 4397454 - 4397492 + F 100 -13.3 -4.8543 | opp_overlap 4397459, overlap 4397459 4397490 GCGATTTAATCGTTG CACAAGGCGTGAGATTG GAATA CAATTTCGCGCCTTTTG TTTTTATGGGCCTTG TERM 5544 4397459 - 4397487 + F 100 -11.8 -5.35224 | opp_overlap 4397459, overlap 4397454 TTAATCGTTGCACAA GGCGTGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5545 4397490 - 4397519 + F 90 -7.3 -5.36441 | gap 1, overlap 4397454 4397493 ACAATTTCGCGCCTT TTGTTTTTATGGGC CTT GCCCGTA-AAACGA TTTTTTATATCACGG TERM 5546 4397902 - 4397879 - g 77 -8.2 -4.13343 | gap 1, overlap 4397871 ACAAAGTGGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4397578 - 4398006 + | 50S ribosomal protein L11 TERM 5547 4398553 - 4398513 - g 74 -3.1 -4.98255 | opp_overlap 4398521 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4398010 - 4398714 + | 50S ribosomal protein L1 rplJ 4399127 - 4399624 + | 50S ribosomal protein L10 rplL 4399691 - 4400056 + | 50S ribosomal protein L7/L12 TERM 5548 4400096 - 4400121 + F 100 -15.5 -4.64766 | opp_overlap 4400087, overlap 4400067 AGAAATCAGGCTGAT GGCTGGTGACT TTTT GGTCACCAGCC TTTTTGCGCTGTAAG TERM 5549 4401192 - 4401171 - g 81 -6.5 -4.87665 | gap 1 GTGTACGTAGAAAAA GGC-CGCCGT ATC ACTGCGCGCC ACATTCGCCAGCTGG TERM 5550 4403418 - 4403402 - g 86 -6.5 -5.10033 | overlap 4403403 CGAAGAGAAACAAAA TCAGCTG GAA CAGCTGG CTGAGCAGTATGACG TERM 5551 4403417 - 4403403 - g 77 -10 -3.64393 | overlap 4403402 GAAGAGAAACAAAAT CAGCTG GAA CAGCTG GCTGAGCAGTATGAC TERM 5552 4404306 - 4404296 - g 74 -3.2 -4.91459 | overlap 4404284 CAAGATGTATAAAAA CATC GTG GACG GCAACCATCAGATGG rpoB 4400376 - 4404404 + | DNA-directed RNA polymerase subunit beta TERM 5553 4404423 - 4404452 + F 70 -9.2 -3.4252 | opp_overlap 4404441, overlap 4404424 TCGCTCAAACAGGTC ACTGCTGTCGGG GTAAAA CCCGGCAGCGGA TTGTGCTAACTCCGA TERM 5554 4404424 - 4404451 + F 78 -12.7 -2.65298 | opp_overlap 4404441, overlap 4404423 CGCTCAAACAGGTCA CTGCTGTCGGG GTAAAA CCCGGCAGCGG ATTGTGCTAACTCCG TERM 5555 4405821 - 4405837 + G 72 -7.9 -3.87373 | opp_overlap 4405810 4405820 4405817 CGAAGGTAAAGCTAT CCAGCTG CAC CCGCTGG TTTGTGCGGCATATA TERM 5556 4406316 - 4406332 + G 78 -7.9 -4.40561 | CTGCTACCGCATTCT CGGTCTG AAA CCGACCG TTATTTTTGCGGACC rpoC 4404481 - 4408704 + | DNA-directed RNA polymerase subunit beta' TERM 5557 4408731 - 4408744 + T 100 -9.5 -5.65177 | opp_overlap 4408731 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT TERM 5558 4408744 - 4408731 - T 100 -9.5 -4.8384 | opp_overlap 4408731 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT thiH 4410079 - 4408946 - | thiamine biosynthesis protein ThiH thiG 4410846 - 4410076 - | thiazole synthase TERM 5559 4410278 - 4410246 - G 70 -9.7 -3.1552 | overlap 4410244 CCGTATTCACTAACA CCGCGTCGGCCCC CATTTCC AGGGCCTGCGCGG CATGGCTGGGAACGC thiS 4411048 - 4410848 - | sulfur carrier protein ThiS TERM 5560 4410896 - 4410874 - G 72 -4.9 -4.70626 | overlap 4410865 CAATAACCTGAAAAA GCAGGAT CTGGTCGCC ATCCTGC ACGATATGTTGCGTC thiF 4411787 - 4411032 - | hypothetical protein thiE 4412415 - 4411780 - | thiamine-phosphate pyrophosphorylase thiC 4414310 - 4412415 - | thiamine biosynthesis protein ThiC TERM 5561 4412763 - 4412786 + g 70 -6 -4.20367 | GACGGCAATCTTATA GGTGATAAGC CCCT GCTTAACATC TTCTTTATTAGGCAG yjaE 4415020 - 4414544 - | anti-RNA polymerase sigma 70 factor TERM 5562 4415172 - 4415136 - g 75 -4.3 -4.78149 | opp_overlap 4415135, overlap 4415139 4415141 CGTATAATTGAAAAA TTAGATCACGGCTGGTG GGT CGTCAGCCATGAACAAA AATTATGGTTGCCGA nudC 4415115 - 4415888 + | NADH pyrophosphatase TERM 5563 4416046 - 4416061 + G 74 -6 -4.56358 | opp_overlap 4416043, overlap 4416047 AATATAAAGCCACGC GCGCCC AGGC GGGCGA TTTTATGTCGCTGTG TERM 5564 4416095 - 4416083 - g 74 -6.2 -4.56597 | GTCGCTGTGCAAAAA CGCC GAGCT GGCG TGCGAAGTGACTTTG hemE 4415928 - 4416992 + | uroporphyrinogen decarboxylase TERM 5565 4417089 - 4417077 - g 72 -7.7 -3.89822 | GATCGACTCGATAAA GATCC ACC GGATC TGATCGCCGGAGTCG TERM 5566 4417411 - 4417401 - g 71 -2.4 -5.00616 | opp_overlap 4417401 GGCGTGGCGAAAAAA CGGC TCT GCGG TAAATTCGAACCGCT nfi 4417002 - 4417673 + | endonuclease V yjaG 4417716 - 4418306 + | hypothetical protein hupA 4418493 - 4418765 + | transcriptional regulator HU subunit alpha TERM 5567 4418811 - 4418796 - g 72 -10.4 -3.35639 | opp_overlap 4418796 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC TERM 5568 4418796 - 4418811 + G 100 -10.4 -4.84918 | opp_overlap 4418796 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC yjaH 4418778 - 4419473 + | hypothetical protein zraP 4419900 - 4419475 - | zinc resistance protein TERM 5569 4420030 - 4420003 - H 80 -6.2 -4.85267 | opp_overlap 4420003 ATAAACGAGTAAAAA TGACTCGCCTGC TGCG GGTAGCGAGTCA TTTTTACTCATTGAA TERM 5570 4420003 - 4420030 + H 84 -7.8 -4.81083 | gap 1, opp_overlap 4420003 ATAAACGAGTAAAAA TGACTCGCCTGCT GCG GGTAG-CGAGTCA TTTTTACTCATTGAA TERM 5571 4420336 - 4420374 + G 77 -11.6 -3.14344 | TCCGGCTCGCGCGTC GGCATGGGGATGCGCATG CAT CATGCGCAGCAGCAGGCC TTACTGGAAGAAATG hydH 4420138 - 4421514 + | sensor protein ZraS TERM 5572 4422787 - 4422760 - g 90 -10.4 -4.4009 | opp_overlap 4422760 CGGCACTGGAGAAAA CGGGCGGCAACA AAAC CGAAGCCGCCCG TCAGTTAGGGATCAC hydG 4421511 - 4422836 + | transcriptional regulatory protein ZraR purD 4424122 - 4422833 - | phosphoribosylamine--glycine ligase TERM 5573 4422941 - 4422914 - G 77 -11.3 -3.15427 | opp_overlap 4422921, overlap 4422921 AATATCGGTCATTAA GGCATAAGCGC GTTTCT GCGCTTCTGCC ACGGTATGACCCAGC TERM 5574 4424068 - 4424053 - G 73 -11.8 -2.73735 | opp_overlap 4424053 AAACAGTTTCAACCA GCGGCG ACTG CGCCGC TTTCCAGGCCAGCGC TERM 5575 4424053 - 4424068 + g 82 -11.8 -3.53012 | opp_overlap 4424053 AAACAGTTTCAACCA GCGGCG ACTG CGCCGC TTTCCAGGCCAGCGC purH 4425723 - 4424134 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5576 4425795 - 4425754 - R 100 -20.5 -2.96216 | opp_overlap 4425789 4425791, overlap 4425756 4425791 TTTGACTATTACAGA GAGCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGCCC CTAACGGGGCATCCT TERM 5577 4425793 - 4425756 - R 100 -19.5 -3.03443 | opp_overlap 4425789 4425791, overlap 4425754 4425791 TGACTATTACAGAGA GCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGC CCCTAACGGGGCATC TERM 5578 4425840 - 4425858 + r 73 -2.4 -5.20783 | opp_overlap 4425838, overlap 4425844 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTCTTTCAAT TERM 5579 4426127 - 4426113 - R 76 -4.2 -5.0916 | opp_overlap 4426113, overlap 4426114 4426121 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5580 4426159 - 4426147 - R 71 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 5581 4427949 - 4427936 - R 75 -6.7 -4.41177 | overlap 4427940 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5582 4428175 - 4428151 - R 71 -8 -3.93061 | gap 1, opp_overlap 4428158 4428170 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCGAATTTT TERM 5583 4428729 - 4428717 - R 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5584 4431217 - 4431196 - R 74 -8.7 -3.91196 | opp_overlap 4431213 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 5585 4431364 - 4431383 + r 100 -13.6 -4.74103 | opp_overlap 4431364 TCAAATTAAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCATTGGCGC TERM 5586 4431383 - 4431364 - R 93 -13.6 -3.58914 | opp_overlap 4431364 TCAAATTAAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCATTGGCGC yjaB 4431908 - 4431465 - | hypothetical protein metA 4432065 - 4432994 + | homoserine O-succinyltransferase TERM 5587 4433040 - 4433055 + F 100 -10.4 -5.63517 | CAGCACCTTACCTCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4433263 - 4434705 + | malate synthase TERM 5588 4435098 - 4435083 - g 77 -3.2 -5.0538 | GGTGAGTCGAAAAAA GGCTAC ATCA ACAGCC TCGGTGCACTGACTG aceA 4434894 - 4436006 + | isocitrate lyase SSON_4188 4436713 - 4436210 - | IS1 ORF iclR 4439098 - 4438274 - | transcriptional repressor IclR TERM 5589 4439122 - 4439136 + H 81 -3.6 -5.3321 | CCTTTTTCTGTATCG TGGAAA TCA TTTTCA TTTTTATTGTTAGTT metH 4439298 - 4442981 + | B12-dependent methionine synthase TERM 5590 4443010 - 4443040 + F 90 -10.4 -4.29106 | opp_overlap 4443014, overlap 4443012 4443014 CACTTTTCCTTACAA CAAACAGGGCGCTC AAT GAGTGCCCTGTCTC TTTATTAATATGAAA TERM 5591 4443012 - 4443038 + F 95 -13 -3.7456 | opp_overlap 4443014, overlap 4443010 4443014 CTTTTCCTTACAACA AACAGGGCGCTC AAT GAGTGCCCTGTC TCTTTATTAATATGA TERM 5592 4443036 - 4443014 - f 95 -13.4 -4.30719 | opp_overlap 4443014 4443012 4443010 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5593 4443014 - 4443036 + F 100 -15.6 -3.44527 | opp_overlap 4443014, overlap 4443012 4443010 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5594 4443277 - 4443295 + G 77 -10.2 -3.70417 | overlap 4443278 4443287 TTCGAACCGGCGTAA TGCGCGTC TTC GGCGCGCG TTTGCGTACTGTCCT TERM 5595 4443278 - 4443294 + G 73 -11.5 -2.81768 | overlap 4443277 4443287 TCGAACCGGCGTAAT GCGCGTC TTC GGCGCGC GTTTGCGTACTGTCC TERM 5596 4443359 - 4443332 - g 86 -4 -5.41143 | GAGCGTCGAAAAAAA GCCGCTCGCC TTTTGCGC GGGGATCGGC GTTACCGCACTGGTA TERM 5597 4444749 - 4444766 + G 70 -4.1 -4.68384 | TTACTGGGAGATATG CAGCG TCTGAACT CGCTG TTTTGTTCGGTGGCT yjbB 4443201 - 4444832 + | putative alpha helix protein TERM 5598 4444916 - 4444896 - T 79 -11.2 -3.45742 | opp_overlap 4444895, overlap 4444894 GCACTATGAACAAGA TGCCGGAT CATGC ATCCGGCA ATTCACTTAAAAACG TERM 5599 4444954 - 4444930 - T 80 -7.2 -4.68424 | gap 2, opp_overlap 4444930 4444929 CAATTCACTTAAAAA CGGTGACCCGCT TCC AGCGG--CACCG CTTCTTCACCGGCCT pepE 4445612 - 4444923 - | peptidase E TERM 5600 4445522 - 4445508 - G 81 -9.2 -4.02534 | AGCGAAAGGGATAAA CACCGC TGA GCGGCG ACCCTGCAACTGTTC TERM 5601 4445862 - 4445883 + r 72 -5.8 -4.48967 | overlap 4445865 ACTTTGCCACCAATT TGAGCGCC CCTTAA GGCGCTGA TGTTTTTTTATCCTT sorE 4447110 - 4445995 - | putative L-sorbose-1-P-reductase sorM 4448099 - 4447275 - | putative sorbose-permease PTS system IID component TERM 5602 4447689 - 4447677 - G 88 -2.6 -5.59962 | GAAAATAAAGAAAAA CAGC AGCGG GCCG AGGATGTTGCCAGAA sorA 4448907 - 4448110 - | putative sorbose-permease PTS system IIC component TERM 5603 4448304 - 4448285 - G 74 -2.8 -4.91852 | CCGAGGAAAAAGAAA GGCATCAA ATAT TTCACGCC CATCATACGTAGCAC TERM 5604 4448473 - 4448457 - G 72 -10.1 -3.36273 | overlap 4448453 GTGCCGGAATAGCAA CGCGCAG CGC CTGCACG CCAAGCGCGGAGACA sorF 4449874 - 4449467 - | putative sorbose-permease PTS system IIA component TERM 5605 4449873 - 4449862 - G 79 -2.2 -5.24129 | CGTGGGCACAAAAAA TGGC GTTG ACCA TAAAGCCTCCTTATC sorD 4450690 - 4449884 - | sorbitol-6-phosphate 2-dehydrogenase TERM 5606 4450135 - 4450147 + g 71 -9.1 -3.55815 | GCGCGATACCGACCA CACGG ATA CCGTG TTTACCCAGCTCTTT TERM 5607 4452772 - 4452752 - g 72 -4.5 -4.61527 | overlap 4452754 AAAACGGCGGAAAAA GGCGGTCGC CCG GCGTCCAAC GGTAAGCGTTTTACC yjbC 4451945 - 4452817 + | 23S rRNA pseudouridine synthase F TERM 5608 4452827 - 4452808 - T 72 -5.6 -4.40561 | overlap 4452810 GGGGCGTAAAAAGAA GGGGCGCT GATT AACGCCTC AGACTGATGAAAACG yjbD 4453222 - 4452950 - | hypothetical protein lysC 4454823 - 4453474 - | aspartate kinase III TERM 5609 4454239 - 4454253 + g 70 -4.2 -4.68908 | overlap 4454231 4454240 GCCTCCACGGCCAAG CGTCGT TGT ACGACC TTTATTTTCGCTACC TERM 5610 4455424 - 4455457 + G 100 -14.8 -4.93318 | gap 1, opp_overlap 4455420 4455417 AAATGAAAGACGTTA CGATCGCCGATCTTT TTGCT AAAGA-CGGCGATCG TTTTTCTAAGTTCTC pgi 4455348 - 4456997 + | glucose-6-phosphate isomerase TERM 5611 4457122 - 4457146 + F 100 -14.4 -4.40358 | opp_overlap 4457122 AAATAACCTTAAAAA CAATGCCGAC AATAA GTCGGCATTG TTTTATCAGATAAAT TERM 5612 4457146 - 4457122 - f 100 -14.4 -4.7153 | opp_overlap 4457122 AAATAACCTTAAAAA CAATGCCGAC AATAA GTCGGCATTG TTTTATCAGATAAAT yjbE 4457459 - 4457701 + | hypothetical protein TERM 5613 4457791 - 4457770 - f 77 -11.7 -2.8007 | opp_overlap 4457770 4457773, overlap 4457773 TGAAGGGATTAACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5614 4457770 - 4457791 + F 82 -11.7 -3.32343 | opp_overlap 4457770 4457773, overlap 4457773 TGAAGGGATTAACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5615 4457773 - 4457788 + F 76 -9 -3.80174 | opp_overlap 4457770 4457773, overlap 4457770 AGGGATTAACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT TERM 5616 4457788 - 4457773 - f 72 -9 -3.54297 | opp_overlap 4457773 4457770, overlap 4457770 AGGGATTAACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT yjbF 4457785 - 4458453 + | hypothetical protein yjbG 4458450 - 4459187 + | hypothetical protein yjbH 4459187 - 4461283 + | hypothetical protein TERM 5617 4461660 - 4461675 + F 78 -5.4 -4.74103 | GCTGGTGGCTGGGAA TCACCT GAAT GGGTGA TTTTTGAATTACCGG yjbA 4461878 - 4462288 + | phosphate-starvation-inducible protein PsiE TERM 5618 4462319 - 4462296 - T 100 -11 -4.91852 | GGGAGTAAAAAGAAA GCACGCCG AACTGGCG CGGCGTGC TGGACAGGAAGATTA xylE 4463807 - 4462332 - | D-xylose transporter XylE TERM 5619 4462877 - 4462891 + g 74 -7.8 -4.11484 | opp_overlap 4462865, overlap 4462878 ACAGCGCGATATCCG TGCTGG CCC CCAGCG TTTTGAACACTTCCG TERM 5620 4463278 - 4463260 - G 91 -9 -4.65747 | GAACGGGCAATAAAA TAGTTTAC GCA GTAAACTA AAAGTTGCCCGAAAA TERM 5621 4464108 - 4464091 - R 100 -12.7 -5.99154 | GACGAAAGAAAAAAA GGCGCTC CGTG GAGCGCC GAATAACAGTCACAA malG 4465069 - 4464179 - | maltose transporter permease malF 4466628 - 4465084 - | maltose transporter membrane protein malE 4467972 - 4466782 - | maltose ABC transporter periplasmic protein TERM 5622 4466988 - 4467003 + g 70 -4.6 -4.46072 | CGTAAGACTTCAGCG CCACTG CACC CAGCGG TTTGTCTTTATTGAC TERM 5623 4467495 - 4467512 + g 71 -3.4 -4.77157 | gap 1, overlap 4467488 4467495 4467508 GTTCTTTATCCAGCG CC-GGGA TCTCT TCCCAGG TTTTTGGTGGGTTCG TERM 5624 4468774 - 4468798 + G 75 -4.4 -4.7497 | gap 2, overlap 4468741 TGTGGCGATTGGCCG TACGCTGGTGGC CGA GCCA--AGCGTA TTTTTGCTCGATGAA TERM 5625 4469008 - 4469032 + G 72 -7.9 -3.97368 | gap 1 GGAGCTGTACCACTA TCCGGCAGAC CGTTTT GTC-GCCGGA TTTATCGGTTCGCCA malK 4468337 - 4469452 + | maltose/maltodextrin transporter ATP-binding protein lamB 4469524 - 4470864 + | maltoporin TERM 5626 4470912 - 4470873 - f 77 -7 -4.4261 | overlap 4470874 4470875 4470887 4470888 GTGGTAATAGCAAAA CCTGGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATAAA AACAGGTTGTCATTA TERM 5627 4470948 - 4470935 - f 75 -9.5 -3.62096 | opp_overlap 4470930 4470935 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT TERM 5628 4470935 - 4470948 + F 70 -9.5 -2.97017 | opp_overlap 4470935, overlap 4470930 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT malM 4471016 - 4471936 + | maltose regulon periplasmic protein TERM 5629 4471969 - 4471988 + T 100 -11.4 -5.71983 | opp_overlap 4471968 4471967 GATTTTGCAACAACT GGTGCGTC TCCT GGCGCACC TTTTTTTATGCTTCC TERM 5630 4472303 - 4472317 + T 74 -5.8 -4.70659 | AGAGATAACTTTATT TATATC AGT GATATA TTTTTAAATATAAAG SSON_4216 4474042 - 4473023 - | putative transposase TERM 5631 4474558 - 4474525 - R 73 -4 -4.88407 | TGATGCAATTAAAAA TTCTCAATATTGTT AATAAA AACTTTATTGAGAA TATGAAAAAAACATT SSON_4218 4476385 - 4475258 - | putative transposase TERM 5632 4475440 - 4475460 + g 100 -5.3 -5.47159 | overlap 4475420 4475417 CTCTGTCAATGACGG GGCGGGGTA AAT TTTCCTGCC TTTTTTGTATTGCCG TERM 5633 4476749 - 4476718 - H 80 -7.2 -4.62054 | TTAAGTAAAGGAAAA CATCACCGTTCCTG GCAT CATGGGCGGTGATG CCCCTACGGTTGCCC ubiC 4476929 - 4477426 + | chorismate pyruvate lyase ubiA 4477439 - 4478311 + | 4-hydroxybenzoate octaprenyltransferase TERM 5634 4478341 - 4478324 - T 100 -11.3 -5.1101 | opp_overlap 4478324 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGTTGC TERM 5635 4478324 - 4478341 + T 91 -11.3 -4.35604 | opp_overlap 4478324 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGTTGC TERM 5636 4478454 - 4478423 - T 80 -12.2 -3.11634 | opp_overlap 4478422 4478419 4478423, overlap 4478433 TTGCAGATTATGGAA GGCCGGATAAGGCG TTTT CGCCGCATCCGGCA ATTCTCTCTGATTAC plsB 4480889 - 4478466 - | glycerol-3-phosphate acyltransferase dgkA 4481060 - 4481428 + | diacylglycerol kinase lexA 4481538 - 4482146 + | LexA repressor TERM 5637 4482160 - 4482183 + F 100 -16 -4.94262 | AACATATCTCTGAGA CCGCGATGCC GCCA GGCGTCGCGG TTTGTTTTTCATCTC dinF 4482219 - 4483544 + | DNA-damage-inducible SOS response protein TERM 5638 4483636 - 4483617 - f 73 -4.3 -4.77567 | opp_overlap 4483603 ACGTTCAGAAGAAAA GTGAACG TACTCT CATTCAC AACCTAACGATGAGG yjbJ 4483660 - 4483869 + | putative stress-response protein yjbK 4484426 - 4483911 - | zinc uptake transcriptional repressor TERM 5639 4484308 - 4484296 - G 71 -9.1 -3.49858 | TCAAGCAGATCATAA GCGCT GAT AGCGC CATCCTGCAGACTCA yjbL 4484744 - 4484998 + | hypothetical protein yjbM 4485022 - 4485729 + | hypothetical protein TERM 5640 4485771 - 4485792 + F 100 -9.5 -5.4251 | opp_overlap 4485771 4485774 AGGCATTATATAAAA GGACCCAAT ATTT ATTGGGTTC TTTTTTCTCTATCAA TERM 5641 4485792 - 4485771 - f 80 -7.3 -4.57755 | opp_overlap 4485771, overlap 4485774 AGGCATTATATAAAA GGACCCAAT ATTT ATTGGGTTC TTTTTTCTCTATCAA TERM 5642 4485948 - 4485962 + F 85 -7.2 -5.09259 | TGAGAGCTTCATGCC TTGAGA GGA TCTCAA TTTTCTTTTGCAATG yjbN 4486092 - 4487129 + | tRNA-dihydrouridine synthase A TERM 5643 4487160 - 4487183 + F 100 -13.1 -4.43681 | opp_overlap 4487157 4487154 TAGTCAAATTCACCA CGCCCTGCG CACCGT CGCGGGGCG TTTTGCTGTTAAATC pspG 4487263 - 4487505 + | phage shock protein G TERM 5644 4487640 - 4487664 + T 100 -10 -4.77775 | opp_overlap 4487642, overlap 4487642 CGAACTATAAAAAGA AAGGGCTTCC CAGGT GGAAGCCCTA TTTCTTTTATGGAAT TERM 5645 4487642 - 4487662 + T 95 -12.6 -3.99938 | opp_overlap 4487642, overlap 4487640 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA TERM 5646 4487662 - 4487642 - T 100 -12.6 -5.00267 | opp_overlap 4487642 4487640 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA qor 4488654 - 4487671 - | quinone oxidoreductase, NADPH-dependent TERM 5647 4488113 - 4488123 + g 88 -8.2 -4.59853 | overlap 4488112 4488118 GCGCCCGCTTTTAGC GCGC TCT GCGC TTTTTGCGCGGTTCC TERM 5648 4489089 - 4489072 - g 77 -3.3 -5.02476 | overlap 4489074 AGAGCTGTCAAAAAA TACGCCA AGTG CGGCGAA CATCAGTGCTTATGC TERM 5649 4489409 - 4489389 - g 100 -6.7 -5.80364 | opp_overlap 4489389 4489388 ATCTCAACAAAAAAA CCGCTGGCT TGC AGCCGTCGG ATTTGATCATCGTCG TERM 5650 4490085 - 4490060 - g 74 -8.9 -3.9281 | ATTATCGGTAAACAA CGTAACGGCCC AATC GGGACGGTACG CCTGACCTTTAACGG dnaB 4488737 - 4490152 + | replicative DNA helicase alr 4490205 - 4491284 + | alanine racemase TERM 5651 4491708 - 4491729 + G 72 -6.5 -4.42806 | gap 1 GAAGCGCGCCTGAAT GCGCAGC-CC CAT GGCGCTTCGC TTTATTTACCGATGG tyrB 4491537 - 4492730 + | aromatic amino acid aminotransferase TERM 5652 4492763 - 4492740 - f 100 -14.6 -3.79668 | ATGTAATGCAGGAAA GCAGGCTGGA GTTA CCCAGCCTGC AGTGAAATTAAACTG TERM 5653 4494132 - 4494117 - g 86 -4 -5.40072 | GGCGCGGCAAAAAAA CCTTCT CGCC AGAAAG CGAAGATTATCTGAA aphA 4493858 - 4494571 + | acid phosphatase/phosphotransferase TERM 5654 4494572 - 4494606 + F 91 -6.5 -5.52384 | gap 2, opp_overlap 4494576, overlap 4494575 AATTCAGAATACTGA CAG-A-GCGGGAGAGCG TGA TGCTCTCCCGAATGCTG TTTTTTTAATCACAC TERM 5655 4494600 - 4494576 - f 75 -11.4 -2.95894 | opp_overlap 4494575 4494572 CAGAATACTGACAGA GCGGGAGAGC GTGAT GCTCTCCCGA ATGCTGTTTTTTTAA yjbQ 4494682 - 4495098 + | hypothetical protein TERM 5656 4495270 - 4495256 - g 74 -7.8 -4.07568 | overlap 4495259 CTGTTTCGCTGAAAA CCAGCC CGG AGCTGG CGGAGCTGCTACGTC yjbR 4495102 - 4495458 + | hypothetical protein TERM 5657 4495485 - 4495467 - T 100 -12.4 -4.55128 | overlap 4495454 ACTCTGAAAGGAAAA GGCCGCTC AGA AAGCGGCC TTAACGATTACAGCA uvrA 4498315 - 4495493 - | excinuclease ABC subunit A ssb 4498569 - 4499105 + | single-strand DNA-binding protein TERM 5658 4499197 - 4499175 - f 100 -13.5 -5.28176 | opp_overlap 4499178 GCCAGCCATAAAAAA GAAGCCTCC GTTAT GGAGGCTTC TACGTATCAGGTCAA TERM 5659 4499178 - 4499194 + F 73 -10.1 -3.39505 | opp_overlap 4499175 AGCCATAAAAAAGAA GCCTCCG TTA TGGAGGC TTCTACGTATCAGGT TERM 5660 4499607 - 4499587 - f 79 -4.1 -5.1523 | opp_overlap 4499587 TGCAGAACACAAAAA TGAAACA CTCTGTT TGTTTCA TTAATTTTGTGAGCT TERM 5661 4500316 - 4500326 + G 82 -2.4 -5.38047 | TCTATCTATTATTAC CGCG ATA CGCC TTTTTTCTCTGGCTA TERM 5662 4501000 - 4501010 + G 72 -6.8 -4.2828 | GTTTCTATTAACCTG TCGG CCT CCGA TTTTCATACGTCACG TERM 5663 4501497 - 4501468 - g 85 -12.9 -3.19389 | CAATGGATGGAGCAA TTACCCGCGCG GGAGTTAA CGCGCGGGCAA TAAAACTACAGGCGG yjcC 4499914 - 4501500 + | hypothetical protein soxS 4501826 - 4501503 - | DNA-binding transcriptional regulator SoxS SSON_4243 4502202 - 4502705 + | IS1 ORF TERM 5664 4504139 - 4504197 + T 93 -15.5 -2.76456 | gap 1, opp_overlap 4504135 4504134 4504159, overlap 4504134 4504159 GAATCATGAATGTTA G-CCCGAGCTAACCTGTTAAAGGTGCAA AAGA TTGCACCTTTTTCAGATTACCTCGGGCC TGGTTACGTCGCTTT TERM 5665 4504176 - 4504159 - T 75 -9.9 -3.5774 | opp_overlap 4504139 4504159 AGCTAACCTGTTAAA GGTGCAA AAGA TTGCACC TTTTTCAGATTACCT TERM 5666 4504159 - 4504176 + T 93 -9.9 -4.67234 | opp_overlap 4504159, overlap 4504139 AGCTAACCTGTTAAA GGTGCAA AAGA TTGCACC TTTTTCAGATTACCT yjcE 4505866 - 4504217 - | hypothetical protein TERM 5667 4505341 - 4505315 - G 72 -7.4 -3.87815 | gap 1, overlap 4505316 GGCTACTTTCATAAA TTCGACCGTCG CACCGC CGACGGT-GAA GATCATCGTCCCCAT TERM 5668 4505716 - 4505699 - G 74 -2.7 -4.94672 | AAACAAGACTAAAAA GAGTTCA GGAT CAAACTC CACATGCAAACCAAA TERM 5669 4506002 - 4505971 - R 100 -12.4 -4.37658 | opp_overlap 4505977, overlap 4505977 AATGTGCGGAGAAAA TAAAAACGGGCAGC CATT GCCACCCGTTTTCA GAATCCGATGAAAGA TERM 5670 4505996 - 4505977 - R 100 -9.2 -5.54907 | opp_overlap 4505977, overlap 4505971 CGGAGAAAATAAAAA CGGGCAGC CATT GCCACCCG TTTTCAGAATCCGAT yjcD 4507367 - 4506018 - | hypothetical protein TERM 5671 4507195 - 4507211 + g 71 -9.4 -3.53811 | opp_overlap 4507190 GCAACGAAAACTGCC GCAGGC GGGAA GCCTGC TTTACCCAACATACC TERM 5672 4507916 - 4507892 - R 100 -14.4 -4.67651 | opp_overlap 4507892 AGACCGGAAAACAAA CTAAAGCGCC CTTGT GGCGCTTTAG TTTTGTTCATCTTCC TERM 5673 4507892 - 4507916 + r 100 -14.4 -4.78753 | opp_overlap 4507892 AGACCGGAAAACAAA CTAAAGCGCC CTTGT GGCGCTTTAG TTTTGTTCATCTTCC soxR 4508311 - 4507913 - | redox-sensing activator of soxS SSON_4248 4508863 - 4508360 - | IS1 ORF TERM 5674 4509146 - 4509161 + r 80 -6.2 -4.80736 | opp_overlap 4509145 GACTGTCAAAAATCG CTCATT TTTT AATGAG TTTATTTGTTTAATA TERM 5675 4509238 - 4509215 - R 100 -16.8 -2.79321 | overlap 4509212 TGGAGAGGAAGAGTA TTCCCCGGTC AGGC GACCGGGGAA GGGGAGAGATTAATG actP 4510897 - 4509248 - | acetate permease TERM 5676 4510862 - 4510890 + g 72 -6 -4.33105 | gap 1 GTTAGCTGCGAAAGG GAG-TGTGGCGGC AAGC GCCGTCAGAACTC TTTTCATGATGCTTG TERM 5677 4511129 - 4511144 + r 74 -5.4 -4.62783 | overlap 4511130 TAATCGACAGGATGG TGGCAA ACCG TTGCCG TTTTTCGACTAACTC TERM 5678 4511330 - 4511299 - R 78 -12.2 -2.52464 | overlap 4511309 4511310 CCCTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATCAATGCCTGATGC TERM 5679 4511356 - 4511310 - R 70 -10.7 -2.57931 | opp_overlap 4511341, overlap 4511299 4511309 4511336 4511337 TGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCA ATCAA TGCCTGATGCGACGCTGTCGC GTCTTATCAGGCCTA TERM 5680 4511369 - 4511336 - R 73 -9.5 -3.34344 | opp_overlap 4511341, overlap 4511310 4511309 4511337 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAAACCGTTACCG TERM 5681 4511368 - 4511337 - R 81 -13 -2.60392 | opp_overlap 4511341, overlap 4511310 4511309 4511336 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAAACCGTTACC TERM 5682 4511341 - 4511359 + r 79 -11 -3.30124 | opp_overlap 4511310 4511309 4511337 4511336 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA acs 4513365 - 4511407 - | acetyl-CoA synthetase TERM 5683 4512726 - 4512763 + g 81 -4.7 -5.06414 | CCACCACATGCTCTA CGCTGGTGACGTTCGGG TTTT TCAGCGCGTCATCAACG TTTTTCTTCAGCGGA TERM 5684 4513083 - 4513099 + g 77 -6.5 -4.64676 | opp_overlap 4513083, overlap 4513084 CGCCTTCCCAGATGA TGGCGGT ACG ATCGCCG TTTTCTTGCAGATGG TERM 5685 4513740 - 4513720 - H 100 -9.7 -5.51353 | overlap 4513721 GAAAAACAATAAAAA CCGCCATTG TAA CAATGGCGC AATTCGGATGAAGCC TERM 5686 4513739 - 4513721 - H 95 -13.2 -3.87151 | overlap 4513720 AAAAACAATAAAAAC CGCCATTG TAA CAATGGCG CAATTCGGATGAAGC TERM 5687 4514371 - 4514353 - g 72 -8 -3.8709 | opp_overlap 4514367 AAACCTTTTGAGAAA GCCGGACG TTT CGACCAGC AATCGATGGTTTGCG nrfA 4513759 - 4515195 + | cytochrome c nitrite reductase nrfB 4515234 - 4515806 + | cytochrome c-type protein NrfB TERM 5688 4515906 - 4515955 + G 75 -11.5 -2.93703 | gap 1, overlap 4515908 TGAATATCAATGGGG TGCGTTACGGCATGGTGCATGACG AGT CGTTATGCATCG-GCTGTACCGCC TGTATGGATGCTTGT nrfC 4515803 - 4516474 + | formate-dependent nitrite reductase nrfD 4516471 - 4517427 + | formate-dependent nitrate reductase complex transmembrane protein TERM 5689 4518057 - 4518088 + G 83 -12.9 -3.07935 | overlap 4518055 GCGGCGAGTTTGATG CGGCCAGCGCCCG AATTTG CTGGCGCTGGGCG TTACCTGGCTGGAGT TERM 5690 4518948 - 4518936 - g 76 -10.5 -3.34344 | opp_overlap 4518936 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTATGAAGCACG TERM 5691 4518936 - 4518948 + G 100 -10.5 -4.82901 | opp_overlap 4518936 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTATGAAGCACG nrfE 4517507 - 4519165 + | heme lyase subunit NrfE nrfF 4519158 - 4519541 + | formate-dependent nitrite reductase complex subunit NrfF nrfG 4519538 - 4520134 + | formate-dependent nitrite reductase complex subunit NrfG TERM 5692 4521599 - 4521615 + G 70 -6.5 -4.28713 | GTAGCGTAGGTATTC CGCTGGA AGG TCTGGCG TTTATTGCTGGTGTT gltP 4520476 - 4521789 + | glutamate/aspartate:proton symporter TERM 5693 4521820 - 4521797 - T 71 -9.6 -3.21153 | gap 1, opp_overlap 4521797, overlap 4521795 ATCAATAATTGAAGA TTGCCGGG-GA TAT CCACCCGGCAA TGTGTGAATGCCTGA TERM 5694 4521829 - 4521863 + T 70 -10.7 -2.53911 | overlap 4521839 CCGGCAATGTGTGAA TGCCTGATGCGACGC TTGCC GCGTCTTATCAGGCC TACCTTAACCGTTGG TERM 5695 4521868 - 4521882 + T 80 -7.2 -4.62302 | CTTATCAGGCCTACC TTAACC GTT GGTTAA TTTTTCAAACTCTTC yjcO 4522557 - 4521868 - | hypothetical protein TERM 5696 4522636 - 4522617 - R 100 -13.6 -5.66684 | GAATGGATAAAAAAA CAGCCTCC GAAA GGAGGCTG TAGAAAGGACTGTAT TERM 5697 4522709 - 4522761 + r 73 -7.9 -4.19177 | gap 4, opp_overlap 4522707 TACTCGTCAATCACG TACTGC-TCG-GCG-G-CGCGCTGATC GGC GATCGGCTCGACGCGCACGGCGCAGTA TTTGTATTCCGGCGT TERM 5698 4522937 - 4522970 + r 74 -8.3 -3.91897 | gap 1 ACCAATGCCTCATCT TCAATACC-CAGACGT TTG GCGTCTTCGGTATTGA TTTGTGCGTAGCCAG TERM 5699 4523484 - 4523495 + r 74 -7.2 -4.30576 | GCAAAATGACATCCG CCGC CGAC GCGG TTTTGGTCATAAAGA TERM 5700 4523969 - 4523990 + r 80 -12.3 -3.06815 | opp_overlap 4523967 GCCGCCTGACGAATC TCACTGGCG CTGA CGCCGGTGA TATCTTCAACCGACT TERM 5701 4524050 - 4524085 + r 93 -9.9 -4.69053 | gap 1 TACTCTTCAAAGCCT TCTGTACGG-GAAGCG ACGAA CGCTTTGTCGTACAGA TTTTCTTCAATAATG TERM 5702 4524989 - 4524964 - R 95 -11.9 -4.10552 | overlap 4524966 CGTGACGAAACGAAA TACCGCGTGAC AGCC ATCACGCGGCA GACATTTTATTTTTT TERM 5703 4524987 - 4524966 - R 88 -12.3 -3.64541 | overlap 4524964 TGACGAAACGAAATA CCGCGTGAC AGCC ATCACGCGG CAGACATTTTATTTT yjcP 4526462 - 4524996 - | putative outer membrane efflux protein MdtP TERM 5704 4525481 - 4525464 - G 70 -4.1 -4.62872 | overlap 4525465 4525479 ATCAAGGCCGAAAAA CGCTTTG ATAT CAAAGCT CGGGTAGAACAGCGC TERM 5705 4526308 - 4526333 + g 72 -6.9 -4.21141 | gap 1 TGCGGCCAGCCGGAG CTGGCAAGATGA ATA TCATCG-GCCAG TTTGATTTGTTCCGG yjcQ 4528510 - 4526459 - | multidrug efflux system protein MdtO TERM 5706 4528262 - 4528238 - G 71 -2.7 -4.8048 | overlap 4528240 4528241 TTTGTAGATCAAAAA CAGGCTGCCGA TCT CCAGCACCGTG GCAACCACAAACAAG yjcR 4529541 - 4528510 - | multidrug resistance protein MdtN TERM 5707 4529144 - 4529166 + g 90 -7.6 -4.85599 | CGTAATGTATCTGTG GCCTGTTTCG CGG CGGCACGGGC TTTTTCTACCGTGGC TERM 5708 4529257 - 4529217 - G 77 -11.8 -3.14211 | ACTGTTGCGCATCAA CGCTACGCTGGGTGAGCA TAATT TGCTTATCCAGCGCCGCG AGGGAGGCTTCAGCT SSON_4264 4529883 - 4529560 - | formate dehydrogenase H TERM 5709 4530036 - 4530005 - R 100 -14.5 -4.65933 | opp_overlap 4529985 4529995, overlap 4530006 TATTTTTAAAATAAA TGCTTTTGGGGGC TTCAGC GCCCCCAAAAGCG AGTGACATTAATTTG TERM 5710 4530035 - 4530006 - R 100 -18 -3.38836 | opp_overlap 4529985 4529995, overlap 4530005 ATTTTTAAAATAAAT GCTTTTGGGGGC TTCAGC GCCCCCAAAAGC GAGTGACATTAATTT yjcS 4532041 - 4530044 - | hypothetical protein TERM 5711 4530122 - 4530136 + g 70 -5.7 -4.32607 | CAGTTTCGCGCCATT GCCAA TAATT TTGGC TTTCTTCGCTTTTAC TERM 5712 4531525 - 4531504 - G 70 -7.3 -4.06419 | TGTGGGTATAAATAA CCGCAACAA TCGG TTTTTGCGG GCGATTTTGGAAGTA TERM 5713 4532335 - 4532371 + G 81 -5.8 -4.73613 | overlap 4532336 AATGGGCGGTCATGT CGCTGGCACCGCAG GATTCTGCG TTGCTGTGCCAGCC TTTTATTCATGGTCA TERM 5714 4532336 - 4532370 + G 71 -9.3 -3.43445 | overlap 4532335 ATGGGCGGTCATGTC GCTGGCACCGCAG GATTCTGCG TTGCTGTGCCAGC CTTTTATTCATGGTC TERM 5715 4532447 - 4532466 + G 86 -9.3 -4.41047 | GATTATCCGCATTAT GCCAGTG AAGTTG CACTGGC TTTTGGTTCACGAGT rpiB 4532282 - 4532599 + | ribose 5-phosphate isomerase B SSON_4267 4532668 - 4532997 + | hypothetical protein phnP 4533902 - 4533144 - | carbon-phosphorus lyase complex accessory protein TERM 5716 4533538 - 4533528 - G 70 -6.8 -4.11033 | overlap 4533524 ATCAAACACCACAAA CGGT TCC ACCG TGTGGCTGAAATCAA phnO 4534338 - 4533904 - | aminoalkylphosphonic acid N-acetyltransferase phnN 4534882 - 4534325 - | ribose 1,5-bisphosphokinase TERM 5717 4534444 - 4534460 + g 71 -9.3 -3.54408 | opp_overlap 4534436 GAGTATAGCGGGCGG CGCGCGC CAG GCGGGCG TTAATTTCACTGGCG TERM 5718 4534804 - 4534829 + g 72 -11.7 -2.54325 | overlap 4534803 4534802 GTAGCTGAGTTTGTT CCCGCAGGCGG AGTT CCGCCAGCAGG CTATCTTTCCCGGAG phnM 4536018 - 4534882 - | phosphonate metabolism TERM 5719 4535634 - 4535649 + g 74 -8.2 -3.97602 | overlap 4535598 4535641 4535646 GCAGACGGTGCTCGG CGCGGT TGAC GCCGCG TTTCTGCGTCTCTTC phnL 4536695 - 4536015 - | ATP-binding component of phosphonate transport TERM 5720 4536134 - 4536144 + g 72 -4.6 -4.62069 | GAATCAGCTCGACTA CGGC GGC GCTG TTTTTGGCGTCCAGC TERM 5721 4536736 - 4536782 + r 88 -12.4 -3.53811 | opp_overlap 4536779, overlap 4536723 4536726 GATGCGACGCTGACG CGTCTTATCCGACCTACGGG GAGCGCA TTTGTAGGCCGGATAAGGCG TTTACGCCGCATCCG phnK 4537564 - 4536806 - | phosphonates transport ATP-binding protein phnJ 4538406 - 4537561 - | phosphonate metabolism phnI 4539463 - 4538399 - | phosphonate metabolism TERM 5722 4539044 - 4539056 + g 78 -10.5 -3.53224 | GGCGGTGGTCAGCGT CGGCG CTT CGCCG TTTGCCAGCAGAGTG phnH 4540047 - 4539463 - | carbon-phosphorus lyase complex subunit TERM 5723 4539710 - 4539678 - G 74 -7.5 -4.11216 | overlap 4539679 4539681 TGGCGACCTGTAAAA TCAGCGTCGCGCCCG CTT CCGGCGCAACGGCGG TGTCGGTGGAAAGGG TERM 5724 4539709 - 4539679 - G 72 -11 -3.06515 | overlap 4539678 4539681 GGCGACCTGTAAAAT CAGCGTCGCGCCCG CTT CCGGCGCAACGGCG GTGTCGGTGGAAAGG TERM 5725 4539918 - 4539932 + g 73 -11.4 -2.77043 | overlap 4539917 TGGTGGCGATATTCA GCGGCT GCC AGCCGC GTTTGAGCTGATACA phnG 4540496 - 4540044 - | phosphonate metabolism TERM 5726 4540206 - 4540229 + g 79 -10.2 -3.85698 | opp_overlap 4540205 4540206 4540208 CATCAGCGCATCAAT CAGCGCGCAG CGTT CGGCGTGCTG TTTATCACGCCCCAG phnF 4541222 - 4540497 - | putative transcriptional regulator TERM 5727 4540738 - 4540717 - G 70 -5.1 -4.36914 | gap 1 TGCTCGCGCAGAAAA TCGTGCAGCG AAC CGCTGT-CGA AACGTTGCAGTGTCG phnE 4542022 - 4541243 - | membrane channel protein component of Pn transporter phnD 4543164 - 4542148 - | periplasmic binding protein component of Pn transporter phnC 4543977 - 4543189 - | phosphonate/organophosphate ester transporter subunit TERM 5728 4543309 - 4543287 - G 78 -7.6 -4.36914 | opp_overlap 4543286 TGCCGTCGTAGAAAA CGTGCCCCTG GCG CAGGGCGACG ATGCGTTCGCAGTAG TERM 5729 4544417 - 4544436 + r 74 -7.1 -4.24002 | CCGGAAGGGCAGTTC TCGGCGC TGTCCT GCGCTGA TTTTGGCATTTCGCC TERM 5730 4544659 - 4544607 - R 73 -10.6 -2.98088 | gap 1, opp_overlap 4544609 4544629 4544630, overlap 4544614 4544627 4544629 4544630 TTCGAAATTTATACA GATGAGAGGCTGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAGTCGG-CATC GTTGCCGGATGCGGC TERM 5731 4544653 - 4544614 - R 100 -17.2 -2.90797 | opp_overlap 4544609 4544629 4544630, overlap 4544607 4544627 4544629 4544630 TTTATACAGATGAGA GGCTGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAGTC GGCATCGTTGCCGGA TERM 5732 4544683 - 4544629 - R 74 -10.5 -3.21276 | gap 1, opp_overlap 4544609 4544629 4544630, overlap 4544627 4544614 4544607 4544630 GGCTGCCTGATAAGA CGCGCAAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGCGAGCGCC TTATCCGGCTTACCG TERM 5733 4544629 - 4544683 + r 93 -14.9 -3.33261 | gap 1, opp_overlap 4544627 4544614 4544607 4544629 4544630, overlap 4544609 4544630 GGCTGCCTGATAAGA CGCGCAAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGCGAGCGCC TTATCCGGCTTACCG TERM 5734 4544682 - 4544630 - R 83 -14 -2.52623 | gap 1, opp_overlap 4544609 4544629 4544630, overlap 4544627 4544614 4544607 4544629 GCTGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGCGAGCGC CTTATCCGGCTTACC TERM 5735 4544630 - 4544682 + r 100 -18.4 -2.59742 | gap 1, opp_overlap 4544627 4544614 4544607 4544630 4544629, overlap 4544609 4544629 GCTGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGCGAGCGC CTTATCCGGCTTACC phnA 4545046 - 4544711 - | hypothetical protein TERM 5736 4545101 - 4545089 - H 100 -9.1 -5.08011 | AAAAGCGCCAAAAAA CGGCA GAT TGCCG AAAAAGGCCGCAATT TERM 5737 4546222 - 4546210 - g 77 -3.4 -5.03314 | CGCATCTGCAAAAAA TGCT TAACC AGCA GCTGGCACGCGCCTC yjdA 4545459 - 4547687 + | hypothetical protein yjcZ 4547717 - 4548550 + | hypothetical protein proP 4548814 - 4550316 + | proline/glycine betaine transporter TERM 5738 4550358 - 4550328 - T 78 -12.6 -2.66593 | overlap 4550324 ATAAGCTGAAACGGA TGGCCTGATGTGAC GCT GTCTTATCAGGCCA ATTGAACTCTTAAGG basS 4551584 - 4550493 - | sensor protein BasS/PmrB basR 4552262 - 4551594 - | DNA-binding transcriptional regulator BasR yjdB 4553932 - 4552259 - | putative cell division protein TERM 5739 4553983 - 4553950 - R 90 -9.7 -4.54727 | opp_overlap 4553954, overlap 4553954 GCTCGCAAAGCAAAA TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT ATGTTTGCTGGATTA TERM 5740 4553954 - 4553979 + r 100 -14.9 -4.82128 | opp_overlap 4553954 4553950 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTGG TERM 5741 4553979 - 4553954 - R 100 -14.9 -3.78998 | opp_overlap 4553954, overlap 4553950 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTGG yjdE 4555343 - 4554006 - | arginine:agmatin antiporter TERM 5742 4555309 - 4555277 - G 80 -12 -3.33162 | overlap 4555280 CACCTGACCCCATAA TATTCCCCGACACC ATCAG GGTGACGGGGATTA AGCCCACTTTGTGAG TERM 5743 4555306 - 4555280 - G 84 -13.7 -2.53822 | overlap 4555277 CTGACCCCATAATAT TCCCCGACACC ATCAG GGTGACGGGGA TTAAGCCCACTTTGT adiY 4556241 - 4555480 - | putative ARAC-type regulatory protein TERM 5744 4555571 - 4555561 - G 75 -5.4 -4.69487 | opp_overlap 4555559 4555561 AAAGACAGAAATAAA GTAC GAC GTAC TGTTGTAGCCGCAGG TERM 5745 4556448 - 4556430 - R 100 -8.8 -5.85178 | AACAGGCAAAAAAAA GCGCGG GGTGGGG CCGCGC AAAAAGTATGACATT TERM 5746 4556517 - 4556507 - R 79 -8.2 -4.2349 | overlap 4556508 TTGCCATACTCAAAA GGCC TAA GGCC AGGCGGCGTAATGTT adiA 4558836 - 4556566 - | biodegradative arginine decarboxylase TERM 5747 4556881 - 4556899 + g 90 -7.4 -4.86731 | GGAATAGGCTTCGTT CAACCGTG CGC CAGGGTTG TTTTCTTTCAGCCAG TERM 5748 4557168 - 4557179 + g 72 -7.2 -4.20918 | opp_overlap 4557151 CAGTGACCAGCGCCG CCGG AACA CCGG TTTCTTCCAGTTCAC TERM 5749 4557376 - 4557387 + g 70 -5.8 -4.20367 | TTTGCCGGTTTGTGG GTCG GTGA CGAC TTCTTTGTTCCACGG TERM 5750 4557712 - 4557702 - G 70 -6.8 -4.07687 | opp_overlap 4557702 AGTGGGTGGCGAAAA CGGT AGG ACCG TTGTGATCGCCAGGT melR 4559940 - 4559032 - | DNA-binding transcriptional regulator MelR TERM 5751 4559385 - 4559371 - G 75 -5.6 -4.66537 | opp_overlap 4559381, overlap 4559373 CTGGCTAACATAAAA TTGCGC ATG GCGCGA GACGCTGTTTTTGTG TERM 5752 4559381 - 4559392 + g 74 -2.2 -5.03994 | gap 1, opp_overlap 4559373 4559371 TAAAATTGCGCATGG C-GCG AGA CGCTG TTTTTGTGTGTGCGC TERM 5753 4560875 - 4560863 - g 70 -6.9 -4.14511 | opp_overlap 4560863 4560865, overlap 4560864 AACTGGAGCGTAAAA CCGCC GAC GGCAG TTACGTGAATCTCTA TERM 5754 4560865 - 4560908 + G 80 -11.6 -3.28712 | opp_overlap 4560863 4560864, overlap 4560863 CTGGAGCGTAAAACC GCCGACGGCAGTTACGTGAA TCTC TACCCGGAACTGCTGGCGGC TTATGAAGCAGGGCA TERM 5755 4561468 - 4561443 - g 76 -7.6 -4.18494 | gap 1 TATTCTTACGGAAAA TCGCGACCGTG TTTAC CACG-CCGCGA TGATGGACCCGCATA melA 4560223 - 4561578 + | alpha-galactosidase SSON_4296 4562949 - 4563854 + | insertion element IS2 transposase InsD TERM 5756 4564489 - 4564461 - Tf 75 -6.1 -4.45151 | opp_overlap 4564460 AATAGCTAACGAAAA TGGCCTGAT GCGATATGTTT ATCAGGCCA CGTCTTAATGTAATG yjdF 4565983 - 4565288 - | hypothetical protein SSON_4297 4564850 - 4565353 + | IS1 ORF fumB 4567752 - 4566106 - | fumarase B TERM 5757 4566726 - 4566741 + g 72 -4.7 -4.66163 | GTGGAATGTACTGAC CTGGA TTGTGT TCCAG TTTTTCGATCCAGAT TERM 5758 4567087 - 4567106 + g 75 -7.2 -4.36914 | gap 1 GTACGGCGGGCAGGC TGCAGTACC GAG GGTAC-GCA TTTTCTCGACGAGGA TERM 5759 4567107 - 4567123 + g 73 -3.7 -4.81249 | overlap 4567108 TACCGAGGGTACGCA TTTTCTC GAC GAGGAAG TTTTTCAGTTTGCCG TERM 5760 4567822 - 4567791 - R 76 -8.7 -4.13767 | opp_overlap 4567815 TTTGTTATTCGAAAA TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA AGTGCATTTATAAGA dcuB 4569170 - 4567830 - | anaerobic C4-dicarboxylate transporter TERM 5761 4568266 - 4568277 + g 74 -2.2 -5.0538 | GCGATCATACCGGAA CGGA AGAC TTCG TTTTTTGAGATAGAC yjdG 4570460 - 4569741 - | DNA-binding transcriptional activator DcuR yjdH 4572088 - 4570457 - | sensory histidine kinase DcuS TERM 5762 4570906 - 4570893 - G 74 -2.3 -5.14563 | TTGCTGATTAAAAAA CCAGC GATA ACCGG AGATTTGATCTTACC TERM 5763 4571847 - 4571860 + g 88 -5.2 -5.24129 | overlap 4571823 GCGATGGCCTGGATG CCGC TCTCCT GCGG TTTTTTCTGCAAGCC yjdI 4572269 - 4572499 + | hypothetical protein yjdJ 4572511 - 4572783 + | hypothetical protein yjdK 4573010 - 4573306 + | hypothetical protein TERM 5764 4573476 - 4573486 + T 71 -6.8 -4.01646 | CCTGGCCAATGAGTC TGCC TGT GGCA TTACTTTTTTCTCTC TERM 5765 4573613 - 4573582 - T 100 -18.2 -2.71364 | opp_overlap 4573586 4573590, overlap 4573550 4573549 4573586 4573590 GGATTTGCGGAACGA CGAACGAAGCAGTC GCCT GACTGCTTCGTTCA TTAAAGTGAAATTTA TERM 5766 4573586 - 4573609 + T 100 -15.4 -3.35813 | opp_overlap 4573582 4573586 4573590, overlap 4573590 TTGCGGAACGACGAA CGAAGCAGTC GCCT GACTGCTTCG TTCATTAAAGTGAAA TERM 5767 4573609 - 4573586 - T 100 -15.4 -3.27298 | opp_overlap 4573586 4573590, overlap 4573582 4573590 TTGCGGAACGACGAA CGAAGCAGTC GCCT GACTGCTTCG TTCATTAAAGTGAAA TERM 5768 4573590 - 4573605 + T 70 -9 -3.45634 | opp_overlap 4573586 4573582 4573590, overlap 4573586 GGAACGACGAACGAA GCAGTC GCCT GACTGC TTCGTTCATTAAAGT TERM 5769 4573605 - 4573590 - T 70 -9 -3.43151 | opp_overlap 4573590 4573586, overlap 4573586 4573582 GGAACGACGAACGAA GCAGTC GCCT GACTGC TTCGTTCATTAAAGT lysU 4575143 - 4573626 - | lysyl-tRNA synthetase yjdL 4576837 - 4575380 - | putative peptide transporter TERM 5770 4576224 - 4576237 + g 79 -2.3 -5.28778 | overlap 4576225 GGTAAGGCAAATTTG ACGCT AGTG AGCGC TTTTTTATCCATACT TERM 5771 4576882 - 4576861 - R 100 -14.5 -5.1861 | opp_overlap 4576861 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT TERM 5772 4576861 - 4576882 + r 93 -14.5 -3.30619 | opp_overlap 4576861 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT SSON_4309 4577912 - 4577199 - | IS600 ORF2 SSON_4310 4578355 - 4578053 - | IS600 ORF1 SSON_4311 4580219 - 4579314 - | insertion element IS2 transposase InsD TERM 5773 4581708 - 4581669 - H 72 -2.7 -5.08824 | TCTCCAGGTAAAAAA GGCCCCTCCCAACACAT GGGACA AAATGAAAGGAGGAGCC TCGGAAAATACTTTT SSON_4312 4582185 - 4582487 + | IS600 ORF1 SSON_4313 4582628 - 4583341 + | IS600 ORF2 TERM 5774 4583413 - 4583438 + F 100 -9.8 -5.61596 | opp_overlap 4583413 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 5775 4583438 - 4583413 - f 72 -9.1 -3.61398 | opp_overlap 4583413 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT SSON_4314 4583428 - 4584774 + | IS4 orf TERM 5776 4584785 - 4584756 - T 89 -9.3 -4.59109 | overlap 4584758 4584779 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCCAGCAGCAG TERM 5777 4584783 - 4584758 - T 100 -16.3 -3.90762 | overlap 4584756 4584779 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCCAGCAGC TERM 5778 4585548 - 4585527 - T 79 -8.7 -4.19735 | TGTCTGAAAACCAAA TGCAGGAGA AATT TCTCCGGCA TAAGCAATTGGGCCA TERM 5779 4586060 - 4586034 - T 81 -5.1 -5.10461 | opp_overlap 4586034 4586032, overlap 4586035 4586037 TTTATGTAATAAAAA TTATGCGGCAA ATAAA TTGCCGCAACA TATTATACCAATGGG TERM 5780 4586057 - 4586037 - T 79 -11.2 -3.39664 | opp_overlap 4586034 4586032, overlap 4586035 4586034 ATGTAATAAAAATTA TGCGGCAA ATAAA TTGCCGCA ACATATTATACCAAT TERM 5781 4586687 - 4586705 + T 70 -8.8 -3.44146 | opp_overlap 4586686 CGATGAGGCAAAATT TGCTGGAG CGT CTCCTGCA TTCGTTGTGGCCACG TERM 5782 4588272 - 4588253 - T 100 -13.6 -4.98531 | opp_overlap 4588253 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG TERM 5783 4588253 - 4588272 + T 100 -13.6 -4.11295 | opp_overlap 4588253 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG TERM 5784 4588318 - 4588334 + T 73 -10.9 -2.62616 | opp_overlap 4588317 4588315 4588312 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4589066 - 4588467 - | putative transcriptional regulator dipZ 4590776 - 4589079 - | thiol:disulfide interchange protein precursor cutA 4591090 - 4590752 - | divalent-cation tolerance protein CutA TERM 5785 4591176 - 4591197 + r 80 -12.9 -2.56164 | opp_overlap 4591177, overlap 4591175 GTCGGCGGGAAAGAA AGCGGGGCG TGAA CGCCCCGCG ATTGGTCATTACAGC TERM 5786 4591196 - 4591177 - R 100 -16.4 -4.41348 | opp_overlap 4591176 4591175 TCGGCGGGAAAGAAA GCGGGGCG TGAA CGCCCCGC GATTGGTCATTACAG dcuA 4592507 - 4591206 - | anaerobic C4-dicarboxylate transporter TERM 5787 4592576 - 4592601 + r 100 -11.9 -4.59342 | opp_overlap 4592579, overlap 4592579 ACTGCTCACAAGAAA AAAGGCACGTC ATCT GACGTGCCTTC TTTATTTGTACTACC TERM 5788 4592598 - 4592579 - R 100 -13.6 -5.55769 | opp_overlap 4592576 4592579 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTCTTTATTTGTACT TERM 5789 4592579 - 4592598 + r 100 -13.6 -4.39652 | opp_overlap 4592579, overlap 4592576 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTCTTTATTTGTACT aspA 4594106 - 4592625 - | aspartate ammonia-lyase TERM 5790 4593490 - 4593502 + g 74 -7.7 -4.13282 | overlap 4593481 ACTGCGTCCTGCAGC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 5791 4593925 - 4593940 + g 71 -2.6 -4.92757 | gap 1, opp_overlap 4593925, overlap 4593920 ATACCGCGAACAAAT TCAG-GA ATA TCACTGA TTTTGTTGTTGCTGA fxsA 4594398 - 4594868 + | FxsA TERM 5792 4594883 - 4594915 + T 78 -4.8 -5.0925 | opp_overlap 4594876 4594883 GGATTAATGTCGAAA CGCCGGATTATG TGGTTATGC CATTTTCCGGCG TTTTTCGTTTTGGCA yjeH 4596146 - 4594890 - | inner membrane protein YjeH TERM 5793 4596020 - 4596008 - G 77 -6.9 -4.56314 | opp_overlap 4596013, overlap 4596009 CTAAGATAATCAAAA CGGGC CAC GCCCA CAGGCTGTTATTGCC TERM 5794 4596111 - 4596125 + g 70 -7.1 -4.10744 | opp_overlap 4596101 TAGCAGGCCAATGCC CTGGG CCAGC CCCAG TTCTTGTTTGAGTCC groES 4596422 - 4596715 + | co-chaperonin GroES groEL 4596759 - 4598405 + | chaperonin GroEL TERM 5795 4598435 - 4598458 + F 100 -12.4 -5.50723 | opp_overlap 4598435 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA TERM 5796 4598458 - 4598435 - f 84 -8 -4.83246 | opp_overlap 4598435 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA yjeI 4598510 - 4598896 + | hypothetical protein yjeJ 4599866 - 4599099 - | hypothetical protein SSON_4329 4600133 - 4600636 + | IS1 ORF TERM 5797 4601145 - 4601166 + T 76 -7.9 -4.30978 | ATCAGTTACTGCTGG CGTAGCTGG AGAT CCAGCGGCG TTTTGCTGGGTTCGC yjeK 4602163 - 4601135 - | hypothetical protein efp 4602205 - 4602771 + | elongation factor P TERM 5798 4602776 - 4602807 + F 90 -13 -3.65046 | overlap 4602780 GCGTGAAGTAATGCG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCAGGTCAGAG TERM 5799 4602780 - 4602803 + F 86 -14.6 -2.66106 | overlap 4602776 GAAGTAATGCGGTTG TGGTGCGGCC TGCA GGCTGCACCA TCACTTATTCAGGTC SSON_4332 4602823 - 4602948 + | entericidin A SSON_4333 4603059 - 4603205 + | entericidin B membrane lipoprotein TERM 5800 4603209 - 4603240 + T 95 -8 -5.44721 | opp_overlap 4603213, overlap 4603213 GCGCAGCAATAAGCA ATAACGGTACGACA GTTA TGTCGTGCCGTTTG TTTTTTTGCGATAGT TERM 5801 4603213 - 4603236 + T 100 -13.2 -5.20328 | opp_overlap 4603213, overlap 4603209 AGCAATAAGCAATAA CGGTACGACA GTTA TGTCGTGCCG TTTGTTTTTTTGCGA TERM 5802 4603236 - 4603213 - T 87 -11 -3.90559 | opp_overlap 4603213 4603209 AGCAATAAGCAATAA CGGTACGACA GTTA TGTCGTGCCG TTTGTTTTTTTGCGA blc 4604227 - 4603694 - | outer membrane lipoprotein Blc TERM 5803 4604305 - 4604288 - R 95 -11.3 -4.46581 | GAAAAGCGCAGAAAA GGTCCGA AAAT TCGGACC CGATGAAATTTTACT ampC 4605449 - 4604316 - | beta-lactamase TERM 5804 4605470 - 4605494 + r 93 -12.7 -3.75629 | opp_overlap 4605472, overlap 4605471 CTGGTTTCCATACAA AACGGCCCGCC ATA GGCGGGCCGGA TTTACATTGGCGATA TERM 5805 4605471 - 4605493 + r 93 -16.2 -2.85056 | opp_overlap 4605472, overlap 4605470 TGGTTTCCATACAAA ACGGCCCGCC ATA GGCGGGCCGG ATTTACATTGGCGAT TERM 5806 4605492 - 4605472 - R 100 -19.7 -4.52589 | opp_overlap 4605471 4605470 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCG GATTTACATTGGCGA frdD 4605871 - 4605512 - | fumarate reductase subunit D frdC 4606277 - 4605882 - | fumarate reductase subunit C frdB 4607022 - 4606288 - | fumarate reductase iron-sulfur subunit frdA 4608823 - 4607015 - | fumarate reductase flavoprotein subunit TERM 5807 4607826 - 4607851 + g 79 -2.6 -5.24129 | gap 1, overlap 4607828 GCTTTCGCCAGTTCG CAG-ATGAACG GCAGA CGTTCATGCAG TTTTTTCTCGCCGAG TERM 5808 4607907 - 4607887 - G 77 -8.9 -4.06491 | opp_overlap 4607888 4607890, overlap 4607890 4607892 GCAAGTCGAGATAAA CCACATCGC CAC GCGGCGTGG AGATGGTGTTGCCTT TERM 5809 4607890 - 4607912 + g 72 -12 -2.51888 | opp_overlap 4607887 4607890 4607892, overlap 4607888 4607911 AGTCGAGATAAACCA CATCGCCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 5810 4607912 - 4607890 - G 75 -12 -3.06686 | opp_overlap 4607890 4607888 4607911, overlap 4607887 4607892 AGTCGAGATAAACCA CATCGCCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 5811 4609952 - 4609964 + G 70 -10.5 -2.71712 | overlap 4609951 CAAGATAACCGTAAG CGCGC GGC GCGCG GTTTGCCGCAGCACC yjeA 4609148 - 4610125 + | lysyl-tRNA synthetase TERM 5812 4610385 - 4610364 - f 79 -3 -5.34555 | opp_overlap 4610364 4610366 4610381, overlap 4610366 TCACACGATAAAAAA GATGAGTC TGATAG GACTCATA TTGATGATCTTTACT SSON_4342 4610760 - 4611263 + | IS1 ORF TERM 5813 4611647 - 4611661 + T 78 -5.8 -4.91084 | ATTTAGTATTGCTGT TAGTAA GCA TTACTA TTTTGTTATTAAATG TERM 5814 4612673 - 4612634 - T 100 -14.5 -3.8647 | gap 1, opp_overlap 4612642 ACTGATCATATGAAA TCCTG-CAACTCATCGTC TCTCC GGCGATGAGTTGTCAGGA AGTAATGCGTATGGA TERM 5815 4612642 - 4612664 + T 71 -9.9 -3.2963 | opp_overlap 4612634 TATGAAATCCTGCAA CTCATCGTC TCTCC GGCGATGAG TTGTCAGGAAGTAAT TERM 5816 4612730 - 4612765 + T 74 -10.6 -3.21912 | gap 1, opp_overlap 4612724 4612742 TGAAGATGATGTTAA GCTGCTAAATGA-GCCA CGT TGACATCATTTGGCAGC TTCATGCATTACAAA yjeP 4616097 - 4612774 - | hypothetical protein TERM 5817 4613280 - 4613301 + g 72 -5.7 -4.56775 | GATCGCGAATTGTCA CCGTATCGC CAAT GCGAATCGG TTTTTCGAACAGGAT psd 4617087 - 4616119 - | phosphatidylserine decarboxylase yjeQ 4618236 - 4617184 - | ribosome-associated GTPase TERM 5818 4617708 - 4617748 + g 74 -11.1 -3.19509 | overlap 4617697 4617706 4617704 4617702 4617709 TGCGGTAGATATCCA TCTGCTCGTTGACGAACGC CAT GCCTTCGTCGTCCAGCAGG TCTATCTTGTTGAGC TERM 5819 4617709 - 4617747 + g 76 -12.4 -2.51223 | overlap 4617697 4617708 4617706 4617704 4617702 GCGGTAGATATCCAT CTGCTCGTTGACGAACGC CAT GCCTTCGTCGTCCAGCAG GTCTATCTTGTTGAG yjeR 4618331 - 4618876 + | oligoribonuclease TERM 5820 4618998 - 4618978 - Tf 80 -5.5 -4.9792 | overlap 4618980 CACTTGAGATAAAAA CGCAAAAAA AAC TTTTTTGGG GGGTTGCAGAGGGAA TERM 5821 4619129 - 4619113 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5822 4619187 - 4619174 - Tf 72 -6.7 -4.28049 | TCCAAAATTTGAAAA GTGCT GCAA AGCAC AGACCACCCAATCGC TERM 5823 4619362 - 4619346 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5824 4619473 - 4619457 - Tf 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5825 4619529 - 4619556 + TF 77 -3.4 -5.27206 | gap 1, overlap 4619532 CTCTCAATAAAATAT CCA-CAGCGACGC GAT GCGTTATTGCTGG TTTTTGTTGTCTCTG TERM 5826 4619696 - 4619718 + TF 70 -4.9 -4.4727 | overlap 4619698 4619714 AATCAAGATTCCGTT TTGTCGAGT CGATC ACTTGACGA TTTTATGCGTCTTGA yjeS 4620915 - 4619776 - | hypothetical protein TERM 5827 4620622 - 4620608 - Gf 73 -10 -3.32844 | opp_overlap 4620607 4620606 CGGCCCAGCGCATAA CGGCTA ACA TAGCCG AGTTTGGGGTTTTTC TERM 5828 4621457 - 4621443 - gH 72 -9.2 -3.53012 | GCCTGCTGGCTGAAA CCGGCG CTA CGCCAG GCGCAGTGATCAACG yjeF 4620914 - 4622461 + | hypothetical protein yjeE 4622433 - 4622894 + | putative ATPase TERM 5829 4623237 - 4623227 - g 72 -6.8 -4.1899 | CGATCTTACCGAAAA CGGT AAA ACCG AAGCGGTGAAGCGGC TERM 5830 4624034 - 4623993 - g 70 -6 -4.27886 | gap 3, opp_overlap 4624002 4624007 GGCGAAATACATAAA CGCCG-AC-CAGAACACGCGA GTC TCG-GCGTTCTGCGTTCGCCG GATATCCCGTCAGTA amiB 4622913 - 4624250 + | N-acetylmuramoyl-l-alanine amidase II TERM 5831 4624482 - 4624455 - g 83 -5.4 -5.14563 | overlap 4624458 TGCGGTATCAAAAAA GATGAGCTGGCG CTGG CGCTGGCTCGTC ATGCCACCAGTAAAA TERM 5832 4625331 - 4625321 - g 77 -8.2 -4.09685 | opp_overlap 4625325 TTCCATTCCGGAAAA CCGC GTG GCGG CGGGGCGCAATCACT TERM 5833 4625550 - 4625517 - g 85 -7.3 -4.78661 | overlap 4625518 ATGCAAAAATTAAAA GCGCCGGAACCGCAG GAAC CTGCACTTGCGGCGA ACAGTCAGAGTTTTG TERM 5834 4625549 - 4625518 - g 78 -10.8 -3.4557 | overlap 4625517 TGCAAAAATTAAAAG CGCCGGAACCGCAG GAAC CTGCACTTGCGGCG AACAGTCAGAGTTTT TERM 5835 4625778 - 4625766 - g 74 -3.3 -4.91109 | TCGGCATTAGAAAAA GCGCA GTC TGCCC TGGCGGAATTGGGTA mutL 4624260 - 4626107 + | DNA mismatch repair protein miaA 4626100 - 4627050 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 5836 4627164 - 4627191 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4627163 4627160, overlap 4627157 AATCTTTACAAGATC CGTTCCTGAACGC ACT GCGT-CGGGAACG TGTTCCAGTTTCTAT TERM 5837 4627367 - 4627357 - g 72 -8.2 -3.78778 | overlap 4627358 TCATCACAGTAACAA CGCC GGT GGCG GTACCAGCAGTAACT hfq 4627136 - 4627444 + | RNA-binding protein Hfq TERM 5838 4628414 - 4628402 - g 71 -3.3 -4.77567 | ACGTGTACAAGAAAA CATCG AAG CGGTG AATACGGTTCTTGAA TERM 5839 4628565 - 4628529 - g 90 -9.5 -4.4768 | overlap 4628525 GACGAAGAGAACAAA CCGATCCGTGTCTG-GC TTTCC GCACAGAC-CGGAGCGG GGATACCACAGCTTT hflX 4627521 - 4628801 + | putative GTPase HflX TERM 5840 4629204 - 4629193 - g 70 -7.2 -4.03811 | opp_overlap 4629203 TATACCATTAAAGAA GCCG AACG CGGC GTGGTAACACGCTTT TERM 5841 4629899 - 4629886 - g 75 -5.3 -4.69664 | GAGACGATGGAAAAA GTGTT GGGT AACAC CCGCAAAGTGCTGGT TERM 5842 4630118 - 4630099 - g 81 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC CAAC GCGCAGCG TAACGACTACCAGCG hflK 4628887 - 4630146 + | FtsH protease regulator HflK hflC 4630149 - 4631153 + | FtsH protease regulator HflC TERM 5843 4631210 - 4631182 - f 87 -9.6 -4.19678 | gap 1, opp_overlap 4631183, overlap 4631183 GTACAGGTCAATAAA GCCACCG-CATCC TCAG GGATGTCGGTGGT TTTCTTTTTCTATAA TERM 5844 4631183 - 4631209 + F 100 -13.1 -5.38839 | gap 1, opp_overlap 4631182 4631183 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA TERM 5845 4631209 - 4631183 - f 82 -13.1 -3.11325 | gap 1, opp_overlap 4631183, overlap 4631182 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA yjeT 4631235 - 4631432 + | hypothetical protein TERM 5846 4631906 - 4631896 - g 74 -8.2 -3.86194 | overlap 4631883 4631897 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 5847 4632051 - 4632019 - g 72 -5.6 -4.56775 | opp_overlap 4632019 4632041, overlap 4632042 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4631536 - 4632834 + | adenylosuccinate synthetase TERM 5848 4633238 - 4633224 - g 74 -2.7 -5.00616 | overlap 4633225 TGTTCGTGGAAAAAA TGGCG GCATT CGCCT GGGTAAACCGGCGAG yjeB 4633039 - 4633464 + | transcriptional repressor NsrR TERM 5849 4633626 - 4633602 - g 75 -5.7 -4.71482 | gap 1, overlap 4633603 ACCAAACGTGAAAAA CCGGCCAGCC GTGATG AGCTGGC-GG TAGAACTGCACATTG TERM 5850 4635841 - 4635830 - g 70 -7.2 -4.08806 | TGAGAAAAAAACGAA GCCG AAAG CGGC GAAGAAAGACGCGAG vacB 4633503 - 4635944 + | exoribonuclease R TERM 5851 4636243 - 4636268 + G 76 -10.5 -3.36492 | gap 1, overlap 4636244 TCTGTTACCGCTGAT TCACGCCCTTGA GTC TCA-GGGCGTGG TTATCCAGTTGGCAA TERM 5852 4636244 - 4636267 + G 73 -11.8 -2.61681 | gap 1, overlap 4636243 CTGTTACCGCTGATT CACGCCCTTGA GTC TCA-GGGCGTG GTTATCCAGTTGGCA TERM 5853 4636338 - 4636308 - g 74 -6 -4.4648 | opp_overlap 4636315 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC CCGCGTGAAGCCAGG yjfH 4636124 - 4636855 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 5854 4636894 - 4636875 - f 72 -6.4 -4.3534 | opp_overlap 4636876, overlap 4636876 TCTGAATTATGAAAA GCCATCCA GATT TGGATGGT TTTTTTTGTCTATAG TERM 5855 4636876 - 4636893 + F 100 -9.9 -6.06529 | opp_overlap 4636875 4636876 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTGTCTATA TERM 5856 4636893 - 4636876 - f 71 -9.9 -3.20722 | opp_overlap 4636876, overlap 4636875 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTGTCTATA SSON_4366 4637175 - 4637678 + | IS1 ORF TERM 5857 4637770 - 4637781 + F 76 -2.2 -5.27779 | gap 1, overlap 4637770 AACGTTGGCGCTAAT G-GGC GGT GCCGC TTTTTTCGTATTGAA TERM 5858 4637936 - 4637922 - f 87 -10 -4.24123 | opp_overlap 4637921, overlap 4637915 4637914 GGAACAACGCCAAAA CGGCAT TTT ATGCCG ATGTTCCGAAGAATA TERM 5859 4638183 - 4638173 - f 80 -5.4 -5.00616 | GGTTCTGGCAAAAAA GAGT CTT ACTC TTCAGGCGGCTTTAC TERM 5860 4638639 - 4638662 + G 74 -8.2 -3.95036 | gap 1, opp_overlap 4638630 GTACAACGCCGATAC GCCGACTTCGT TGT ATGA-GTCGGC TTATTTCCAGTGGTT yjfC 4638277 - 4639440 + | putative synthetase/amidase TERM 5861 4639509 - 4639472 - f 71 -9.9 -3.14132 | opp_overlap 4639476 TCTTTCTGTCATGAA TCCATGGCAGTGGCCAT ACTA ATGGTGACTGCCATTGA TGGAGGGAGACACAG TERM 5862 4639476 - 4639505 + F 77 -11.5 -3.14132 | opp_overlap 4639472 TCTGTCATGAATCCA TGGCAGTGGCCAT ACTA ATGGTGACTGCCA TTGATGGAGGGAGAC TERM 5863 4639788 - 4639805 + G 82 -11.3 -3.49475 | TTCCATCCCGCATGG CACCTGC TGAT GCAGGTG TTATGTACCAATCGG TERM 5864 4639870 - 4639882 + G 100 -10.5 -4.68724 | overlap 4639851 CCGGCGCATTTGTGG CGCGC GCG GCGCG TTTTATGTTACATGC TERM 5865 4640205 - 4640233 + G 100 -3.1 -5.60993 | gap 1, overlap 4640208 4640211 GATGCGCATCTGGTG CTGGCGCAGACC ACGGGC GGTCTGT-CCTG TTTTTTTGTGCCGCG TERM 5866 4640208 - 4640231 + G 70 -4.5 -4.45201 | overlap 4640205 4640211 GCGCATCTGGTGCTG GCGCAGACC ACGGGC GGTCTGTCC TGTTTTTTTGTGCCG TERM 5867 4640644 - 4640634 - g 74 -8.2 -3.9392 | opp_overlap 4640633 GCCGATGCCAAAGAA GCCC TGT GGGC GCGTTTATTTACGCC aidB 4639509 - 4641149 + | isovaleryl CoA dehydrogenase yjfN 4641568 - 4641266 - | hypothetical protein TERM 5868 4641510 - 4641552 + g 76 -3.5 -4.98531 | gap 1 GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA yjfO 4642019 - 4641690 - | hypothetical protein yjfP 4642201 - 4642950 + | esterase yjfQ 4643702 - 4642947 - | transcriptional repressor UlaR TERM 5869 4643801 - 4643760 - R 90 -13.1 -3.47762 | overlap 4643758 4643761 AATAGCTAGGAAATA CTACGCCGGATAGCGCGAA CTTC TCCACGCTATCCGGTATAA ACGACAGATTACAGG TERM 5870 4643800 - 4643761 - R 86 -14.4 -2.67934 | overlap 4643760 4643758 ATAGCTAGGAAATAC TACGCCGGATAGCGCGAA CTTC TCCACGCTATCCGGTATA AACGACAGATTACAG yjfR 4644880 - 4643810 - | putative L-ascorbate 6-phosphate lactonase sgaB 4646643 - 4646948 + | L-ascorbate-specific enzyme IIB component of PTS ptxA 4646958 - 4647422 + | L-ascorbate-specific enzyme IIA component of PTS TERM 5871 4647623 - 4647589 - g 73 -9.3 -3.59979 | gap 1 GTTCGCGATCTGAAA GCGCTCTACCCGCACA AAAT CGTGCTGGCAGA-CGC CAAAATTGCCGATGC ulaD 4647436 - 4648086 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 5872 4648155 - 4648135 - g 100 -12.5 -4.7497 | GGCATCTATGAAAAA GCGCTCCCC GCC GGGGAGTGC TGGCTGGAACGCCTG sgaU 4648096 - 4648950 + | L-xylulose 5-phosphate 3-epimerase sgaE 4648950 - 4649636 + | L-ribulose-5-phosphate 4-epimerase TERM 5873 4649767 - 4649792 + G 71 -9 -3.46659 | TTGTCAGAACGGATC CGCAACGTCG CCGCTA TGGCGTTGCG TTACTTGTGGGTGTA TERM 5874 4650171 - 4650195 + G 74 -6.4 -4.58466 | opp_overlap 4650171 TTGCCTTTTGACGAA TATGCCTCTG AAATC CTGGGGCATA TTTTCTGGTTCTGGA yagU 4649733 - 4650284 + | hypothetical protein TERM 5875 4650318 - 4650301 - T 100 -12.7 -5.27923 | TAACCGCATAAAAAA GCCCCCT GCGA AGGGGGC AAAGCAAACTATGGC yjfY 4650674 - 4650396 - | hypothetical protein rpsF 4651001 - 4651396 + | 30S ribosomal protein S6 TERM 5876 4651535 - 4651520 - g 70 -10.4 -3.21099 | TCTGTGCAGGAGGAA GCCGGT TTTC ACCGGC AGGCGTGGTGCCAAA priB 4651403 - 4651717 + | primosomal replication protein N rpsR 4651722 - 4651949 + | 30S ribosomal protein S18 rplI 4651991 - 4652440 + | 50S ribosomal protein L9 TERM 5877 4652461 - 4652489 + T 100 -16.1 -3.21934 | opp_overlap 4652466, overlap 4652466 TATTCAACGAGACGT AAAAACGCCGACC AGT GGTCGGCGTTTTG CTTTTGTAGCGAGCA TERM 5878 4652466 - 4652484 + T 100 -16 -4.73108 | opp_overlap 4652466, overlap 4652461 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTTGTAGC TERM 5879 4652484 - 4652466 - T 100 -16 -4.72333 | opp_overlap 4652466 4652461 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTTGTAGC SSON_4387 4653523 - 4652552 - | putative dicarboxylate-binding periplasmic protein TERM 5880 4652891 - 4652906 + g 72 -6.1 -4.41548 | overlap 4652881 GTGACGCATGGTGGT CAGCG CCATCA CGCTG TTTTCTGCCATATCG TERM 5881 4653564 - 4653547 - R 93 -12.7 -3.6761 | overlap 4653545 CTTTTCTAATAAATA TGGCGGC AGGT GCCGCCA GTGAATGCGCATCAG SSON_4389 4654512 - 4654009 - | IS1 ORF ytfA 4654786 - 4655112 + | hypothetical protein ytfB 4655770 - 4655096 - | hypothetical protein TERM 5882 4655175 - 4655205 + g 74 -7.4 -4.13014 | opp_overlap 4655167, overlap 4655176 4655185 GTATCAATGGTTAAG CCCGTCACCACGCC GCT GGCGTTCTGGCGGA TTTTCACCATCTGCC TERM 5883 4655176 - 4655204 + g 72 -10.9 -3.07487 | opp_overlap 4655167, overlap 4655175 4655185 TATCAATGGTTAAGC CCGTCACCACGCC GCT GGCGTTCTGGCGG ATTTTCACCATCTGC TERM 5884 4656118 - 4656100 - H 83 -10.2 -3.75153 | opp_overlap 4656103, overlap 4656103 GCGCTGGAAGGCAAA CATCCGGC TGT GCCGGTTG ATGTGGTGCATCGCG TERM 5885 4656115 - 4656103 - H 71 -10.5 -2.6732 | opp_overlap 4656103, overlap 4656100 CTGGAAGGCAAACAT CCGGC TGT GCCGG TTGATGTGGTGCATC TERM 5886 4656103 - 4656115 + H 77 -10.5 -3.29947 | opp_overlap 4656103 4656100 CTGGAAGGCAAACAT CCGGC TGT GCCGG TTGATGTGGTGCATC cycA 4656882 - 4658294 + | D-alanine/D-serine/glycine permease TERM 5887 4658307 - 4658331 + T 100 -16.5 -4.30014 | opp_overlap 4658295 TAACCGCATTATCAT GCTGGATGGCG CAA TGCCATCCAGC TTTTAGATTACTCAC ytfE 4659001 - 4658339 - | cell morphogenesis/cell wall metabolism regulator ytfF 4660083 - 4659109 - | putative transmembrane subunit ytfG 4661042 - 4660182 - | putative oxidoreductase TERM 5888 4660327 - 4660345 + gH 72 -6.6 -4.18018 | overlap 4660328 AGCATATCCGCCAGT CCGTCGGG CAG TCCGACGC TTTTCAGTGCCGCGG TERM 5889 4660328 - 4660344 + gH 70 -10.1 -3.10597 | overlap 4660327 GCATATCCGCCAGTC CGTCGGG CAG TCCGACG CTTTTCAGTGCCGCG ytfH 4661041 - 4661511 + | hypothetical protein TERM 5890 4661569 - 4661597 + Tr 86 -13.2 -3.35467 | opp_overlap 4661557 4661559, overlap 4661563 TAAGATGCGCCAGCA TCGCATCCGCCA ATAAA TGCCGGATGCGA TTGATGATTTATAGG cpdB 4663572 - 4661629 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 5891 4662283 - 4662294 + g 70 -3.6 -4.59773 | GGCGGCATTACGGAA GGTC AACT GGCC TTTTTCCACCTCCAC TERM 5892 4663276 - 4663292 + g 71 -2.9 -4.84363 | opp_overlap 4663276 CAGCGCCTTATAAAC CGGATGA ACA TCACCTG TTTTTAATCCTTTCG cysQ 4663762 - 4664502 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 5893 4664505 - 4664547 + F 80 -10.1 -3.86346 | gap 1, opp_overlap 4664505 4664504 4664508 GTCTATTTACTAAAT TCA-GATGGCAGAAACAG TGTATTTC CTGATTCTGCCATCCTGA TTTCTCCCAACCTAA TERM 5894 4664543 - 4664508 - f 76 -12 -2.68279 | opp_overlap 4664505, overlap 4664505 4664504 TATTTACTAAATTCA GATGGCAGAAACAG TGTATTTC CTGATTCTGCCATC CTGATTTCTCCCAAC TERM 5895 4665073 - 4665061 - g 74 -6.3 -4.51812 | opp_overlap 4665061, overlap 4665057 TCCCATAACAATAAA TGAGT ATA ACTCA TTCATGGATTTCAAA ytfI 4664714 - 4665625 + | hypothetical protein ytfJ 4666269 - 4665715 - | hypothetical protein ytfK 4666555 - 4666800 + | hypothetical protein TERM 5896 4666835 - 4666868 + T 71 -7.5 -3.87869 | gap 1, opp_overlap 4666840 4666842, overlap 4666837 4666842 AAAGTGCTATGCAGT AATAAGACGGCTCCTG ATT CAGGAGCCGT-TGATG TTTCTGGGGGGTTAC TERM 5897 4666837 - 4666866 + T 75 -10.1 -3.52678 | gap 1, opp_overlap 4666840 4666842, overlap 4666835 4666842 AGTGCTATGCAGTAA TAAGACGGCTCCTG ATT CAGGAGCCGT-TGA TGTTTCTGGGGGGTT TERM 5898 4666864 - 4666840 - T 100 -14.3 -3.73647 | opp_overlap 4666837 4666835 4666842, overlap 4666842 GCTATGCAGTAATAA GACGGCTCCTG ATT CAGGAGCCGTT GATGTTTCTGGGGGG TERM 5899 4666862 - 4666842 - T 100 -16.9 -3.44998 | opp_overlap 4666837 4666835 4666842, overlap 4666840 TATGCAGTAATAAGA CGGCTCCTG ATT CAGGAGCCG TTGATGTTTCTGGGG TERM 5900 4666842 - 4666862 + T 100 -16.9 -3.50335 | opp_overlap 4666842 4666840, overlap 4666837 4666835 TATGCAGTAATAAGA CGGCTCCTG ATT CAGGAGCCG TTGATGTTTCTGGGG ytfL 4668223 - 4666880 - | putative transport protein msrA 4669184 - 4668546 - | methionine sulfoxide reductase A TERM 5901 4669315 - 4669328 + H 70 -2.4 -5.06816 | TAGTCTGCTTTTTAA TCCA TATTAC TGGA TTTTTGTTAAGCCGT ytfM 4669390 - 4671123 + | hypothetical protein TERM 5902 4671730 - 4671719 - g 70 -5.8 -4.28656 | overlap 4671710 ACCGAAGATTGAAAA TCCG CAGC CGGA TGAAAAGCCGCTCGG TERM 5903 4673254 - 4673215 - g 79 -2.1 -5.22794 | gap 1, overlap 4673216 4673218 ATAAGGAGCAAAAAA TCAGCAT-CGGGCCACAC TGCTG GCTTAACCCGAATGCGGA ACTGTGCGTGCCGCA TERM 5904 4674849 - 4674870 + G 70 -10.9 -2.70315 | overlap 4674847 4674846 CTATATCTGGAAGCC GTGTCTGGT GTAG ACCAGGCAC TGGATTTGCTCTATC ytfN 4671120 - 4674899 + | hypothetical protein TERM 5905 4674979 - 4674965 - g 72 -11.4 -2.52834 | opp_overlap 4674964 4674963, overlap 4674941 4674946 4674964 CACTGGATGACCAAT GCCCAG TTA CTGGGC GATTTCAGTATCGAT ytfP 4674902 - 4675243 + | hypothetical protein TERM 5906 4675280 - 4675247 - T 87 -11.1 -3.86312 | opp_overlap 4675253 4675255, overlap 4675252 4675255 AGGGATAAGTAATAA TAAAAGCACGCCACC TTCG GGTGGCGTTGTTTTA TGCGATGTATCTCGC TERM 5907 4675275 - 4675252 - T 83 -6.6 -4.95167 | opp_overlap 4675253 4675255, overlap 4675247 4675255 TAAGTAATAATAAAA GCACGCCACC TTCG GGTGGCGTTG TTTTATGCGATGTAT TERM 5908 4675253 - 4675275 + T 90 -9.9 -4.4195 | gap 1, opp_overlap 4675252 4675247 4675255, overlap 4675255 AAGTAATAATAAAAG CA-CGCCACC TTCG GGTGGCGTTG TTTTATGCGATGTAT TERM 5909 4675272 - 4675255 - T 85 -12.7 -3.32865 | opp_overlap 4675255 4675253, overlap 4675252 4675247 GTAATAATAAAAGCA CGCCACC TTCG GGTGGCG TTGTTTTATGCGATG TERM 5910 4675255 - 4675272 + T 95 -12.7 -4.32067 | opp_overlap 4675252 4675247 4675255, overlap 4675253 GTAATAATAAAAGCA CGCCACC TTCG GGTGGCG TTGTTTTATGCGATG ppa 4676152 - 4675622 - | inorganic pyrophosphatase TERM 5911 4676650 - 4676634 - g 70 -7.3 -4.12902 | GAATTACGTTGAAAA TTGCCGA TGG TCAGCAA AAGCAGGAAAACCAG ytfQ 4676462 - 4677418 + | putative LACI-type transcriptional regulator ytfR 4677558 - 4679060 + | putative ATP-binding component of a transport system TERM 5912 4679102 - 4679114 + G 70 -6.2 -4.18018 | opp_overlap 4679099 TCCCTGACACTACGC CGCC AAAAA GGCG TTTTCACTGGCCGAC TERM 5913 4679583 - 4679595 + G 76 -9.1 -3.71848 | TCTCTCATGGTTTGG CAGCG GAT CGCTG TTGTTCCTGCCAACG ytfT 4679071 - 4680096 + | putative transport system permease protein TERM 5914 4680377 - 4680391 + G 72 -7.8 -3.90328 | overlap 4680331 GTGCTGGTGATGGGC TGTGCC TTC GGCGCA TTTATGGGGCTTCTG TERM 5915 4680950 - 4680977 + G 77 -3.4 -5.10765 | gap 1, overlap 4680952 GATGGCACGCTGAGT TCCTGGTGGACGA AAA TCG-CCATCGGTA TTTTGTTGTTTATTT yjfF 4680107 - 4681078 + | inner membrane ABC transporter permease protein YjfF TERM 5916 4681103 - 4681082 - T 100 -15.9 -5.1356 | GCGCAGCAATAAAAA CGCCTCTCC GTGT GGAGAGGCG CAGGAGATTACGCGT fbp 4682109 - 4681111 - | fructose-1,6-bisphosphatase TERM 5917 4681307 - 4681293 - G 74 -8.6 -3.91897 | GGTTGCACTCATAAA GCAAAC GCA GTTTGC CGTCCGGGTGGCTGG TERM 5918 4682054 - 4682077 + g 81 -9.6 -4.09864 | GCAGTGAGCTCACCG GTAGCATGAG AAAA CTCGTGCTGC TTTTCGACAATAAAT yjfG 4682285 - 4683658 + | putative ligase TERM 5919 4683718 - 4683679 - T 79 -12.8 -2.88544 | overlap 4683682 4683693 CTTCAGCCTGATATA GCATTGCCGGATAAGGCG TTTA CGCCGCATCCGGCAAACC ATACTCACATCAACA TERM 5920 4683715 - 4683682 - T 100 -17.5 -2.69468 | overlap 4683679 4683693 CAGCCTGATATAGCA TTGCCGGATAAGGCG TTTA CGCCGCATCCGGCAA ACCATACTCACATCA yjgA 4684292 - 4683741 - | hypothetical protein pmbA 4684386 - 4685738 + | peptidase PmbA TERM 5921 4685765 - 4685744 - f 79 -2.1 -5.58454 | overlap 4685745 CGGACAGTAAAAAAA CTGGCGCGA CCTG CCGCGCTAT AAACTAAAAAATTAC cybC 4686006 - 4686308 + | cytochrome b562 TERM 5922 4686316 - 4686349 + T 93 -14.7 -3.4072 | overlap 4686317 ATCGTTAATTCCTCA TTTCCCTGTTGCCTG CACT CAGGTAACAGGGAAC TTATCATCGCAAATG TERM 5923 4686317 - 4686348 + T 100 -18.2 -2.64218 | overlap 4686316 TCGTTAATTCCTCAT TTCCCTGTTGCCTG CACT CAGGTAACAGGGAA CTTATCATCGCAAAT nrdG 4686817 - 4686353 - | anaerobic ribonucleotide reductase-activating protein TERM 5924 4686900 - 4686867 - R 73 -9.5 -3.34344 | opp_overlap 4686872 4686887, overlap 4686868 GCATCCGGTAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAGCCGTTGCCAA TERM 5925 4686899 - 4686868 - R 81 -13 -2.60392 | opp_overlap 4686872 4686887, overlap 4686867 CATCCGGTAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAGCCGTTGCCA TERM 5926 4686872 - 4686890 + r 79 -11 -3.30124 | opp_overlap 4686868 4686867, overlap 4686887 CGGTAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAG TERM 5927 4686887 - 4686934 + r 88 -12.2 -3.53811 | opp_overlap 4686868 4686867 4686917 4686921 4686931, overlap 4686872 4686921 4686922 GATGCGACGCTGTCG CGTCTTATCAGGCCTACA GCCGTTGCCAAA TGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 5928 4686952 - 4686921 - R 78 -12.2 -2.64155 | opp_overlap 4686887 4686921 4686922, overlap 4686917 4686931 CCGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAACGCAGA TERM 5929 4686921 - 4686952 + r 80 -10 -3.90112 | opp_overlap 4686917 4686921 4686931, overlap 4686887 4686922 CCGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAACGCAGA TERM 5930 4686922 - 4686951 + r 82 -13.5 -2.93853 | opp_overlap 4686921 4686917 4686931, overlap 4686887 4686921 CGTTGCCAAATGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTGCTTAACGCAG nrdD 4689113 - 4686975 - | anaerobic ribonucleoside triphosphate reductase TERM 5931 4688804 - 4688831 + g 77 -6.2 -4.67234 | gap 1, opp_overlap 4688803 4688806, overlap 4688806 TCTGCTCGACCAGAC CACGGATCTCCTG GTT CAGGCGA-CCGCG TTTTTCACGTTCAAT TERM 5932 4689326 - 4689336 + r 74 -5.4 -4.57275 | overlap 4689321 ATATATAGTGCTTTG CATC AAG GATG TTTTAACTTTTTTTG TERM 5933 4689494 - 4689469 - R 93 -9.8 -4.60797 | gap 1 TGCTGACAGACAAAA CCCCGG-AATG ACCGG CATTACCGGGG CTTAGGGAAGATTTA treC 4691162 - 4689507 - | trehalose-6-phosphate hydrolase TERM 5934 4689618 - 4689632 + g 75 -11.4 -3.1247 | GTTGCCGCGCATTTG CCCTGG CTG CCAGGG TTGGATCTCACGGCT TERM 5935 4690221 - 4690209 - G 72 -7.7 -3.87104 | opp_overlap 4690206 GTTACACCAGAACAA GGCAT TCC ATGCC ACGTTGTGCATTCCT treB 4692633 - 4691212 - | trehalose(maltose)-specific PTS system components IIBC TERM 5936 4692072 - 4692086 + g 91 -5.6 -5.41143 | opp_overlap 4692060 4692065 4692069 4692072, overlap 4692074 GCACGATACCAAGGA TCGGCG TGC CGCCCA TTTTTTTCACCGCTG TERM 5937 4692712 - 4692699 - R 91 -8.1 -4.92239 | GGAAAAATTTAAAAA CGGGA ACGT TCCCG AAATGCAGCGAAGAT treR 4693699 - 4692752 - | trehalose repressor TERM 5938 4694926 - 4694959 + G 72 -8.1 -4.00038 | GAATGCCTTTCAGCA GGGGATCAGCCGCGT CAGT ATGCTGCTGATTCGC TTTATGCTGGTGATG mgtA 4694078 - 4696774 + | magnesium-transporting ATPase MgtA TERM 5939 4696967 - 4696948 - T 74 -10.7 -3.14468 | opp_overlap 4696948 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA TERM 5940 4696948 - 4696967 + T 83 -10.7 -3.65827 | opp_overlap 4696948 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA yjgF 4697405 - 4696980 - | hypothetical protein TERM 5941 4697420 - 4697395 - G 100 -10.5 -4.61231 | opp_overlap 4697395 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG TERM 5942 4697395 - 4697420 + g 100 -10.5 -4.63218 | opp_overlap 4697395 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG pyrI 4697900 - 4697439 - | aspartate carbamoyltransferase regulatory subunit pyrB 4698848 - 4697913 - | aspartate carbamoyltransferase catalytic subunit pyrL 4698986 - 4698852 - | pyrBI operon leader peptide TERM 5943 4698897 - 4698880 - G 100 -12.7 -5.75342 | CCTGGGCAAAAAAAA GCCCCTC GATT GAGGGGC TGGGAATGGGTGATC TERM 5944 4699155 - 4699169 + r 75 -2.8 -5.18355 | TCGGTATCAATAATT GCAG ACATTTC CTGC TTTTTCCTTTTTCAC yjgH 4699662 - 4699267 - | hypothetical protein TERM 5945 4699773 - 4699748 - R 80 -5.4 -4.93877 | opp_overlap 4699748 CGTGAGTAAACAAAA CCCAGACATC ATGGGA AATGGCTGGG CTTAATTGAGCGTAG yjgI 4700506 - 4699793 - | oxidoreductase SSON_4430 4700680 - 4700844 + | hypothetical protein yjgJ 4700916 - 4701170 + | hypothetical protein SSON_4433 4701703 - 4702206 + | IS1 ORF TERM 5946 4702551 - 4702582 + T 71 -7.4 -3.85698 | overlap 4702552 ATGGCGTGATGACTT TTCGCCGTAAAT AACTCCAG GTTTACGGCGAG TTTGTGAAAAGAGCG SSON_4435 4703833 - 4703330 - | IS1 ORF argI 4706172 - 4705168 - | ornithine carbamoyltransferase subunit I yjgD 4706334 - 4706750 + | hypothetical protein TERM 5947 4706790 - 4706765 - T 87 -9.7 -4.31379 | opp_overlap 4706765 ATTAATTGATTAAAA TGCCCGATAGC ACAT ACTAGCGGGCA TTTTTTTAGAGTTCG TERM 5948 4706765 - 4706790 + T 100 -9 -5.47399 | opp_overlap 4706765 ATTAATTGATTAAAA TGCCCGATAG CACATA CTAGCGGGCA TTTTTTTAGAGTTCG SSON_4438 4707089 - 4706796 - | hypothetical protein SSON_4439 4707702 - 4707325 - | IS1 ORF TERM 5949 4708683 - 4708663 - g 77 -9.7 -3.59979 | overlap 4708667 4708677 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 5950 4708679 - 4708667 - g 75 -6.9 -4.44046 | overlap 4708663 4708677 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_4440 4707841 - 4709013 + | IS21 ORF1 SSON_4441 4709013 - 4709810 + | IS21 ORF2 yjgN 4710282 - 4711478 + | hypothetical protein TERM 5951 4711486 - 4711513 + T 87 -9.8 -4.3014 | opp_overlap 4711490, overlap 4711490 TTCTGTAAGAGATAA AAAAGGCCGGAG CATG CTCCGGCCTTCG TTTTCATCACTGTGT TERM 5952 4711490 - 4711509 + T 100 -15 -3.72073 | opp_overlap 4711490, overlap 4711486 GTAAGAGATAAAAAA GGCCGGAG CATG CTCCGGCC TTCGTTTTCATCACT TERM 5953 4711509 - 4711490 - T 100 -15 -5.47431 | opp_overlap 4711490 4711486 GTAAGAGATAAAAAA GGCCGGAG CATG CTCCGGCC TTCGTTTTCATCACT valS 4714389 - 4711534 - | valyl-tRNA synthetase TERM 5954 4712894 - 4712914 + g 74 -7.5 -4.07687 | overlap 4712896 ACGCTGGTTGGGTGG AACTGGCGC AGT GCGTCAGTG TTTTCCGGCCAGCCT TERM 5955 4712896 - 4712912 + g 77 -10.1 -3.63744 | overlap 4712894 GCTGGTTGGGTGGAA CTGGCGC AGT GCGTCAG TGTTTTCCGGCCAGC holC 4714832 - 4714389 - | DNA polymerase III subunit chi TERM 5956 4714553 - 4714571 + g 70 -4.5 -4.56597 | gap 1, opp_overlap 4714553 GACTAATCAATATAT CGC-GCGG GCTG CTGCTGCG TTTTTGCGGCCAGGC pepA 4716477 - 4714966 - | leucyl aminopeptidase TERM 5957 4715015 - 4715040 + g 70 -4.5 -4.54727 | opp_overlap 4715017, overlap 4715016 4715017 AGGAACTGTGCCAGC AACGCTACCGG ACGA CCGGTTGCGCC TTTTGCTTTACCAGA TERM 5958 4715038 - 4715017 - G 77 -11.5 -3.14881 | opp_overlap 4715016 4715015 4715017 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTTGCG CCTTTTGCTTTACCA TERM 5959 4715017 - 4715038 + g 73 -11.5 -2.5893 | opp_overlap 4715017, overlap 4715016 4715015 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTTGCG CCTTTTGCTTTACCA TERM 5960 4717615 - 4717629 + G 73 -11.4 -2.65264 | TGAGCGTGGTTAACC CGCGTC AGG GACGCG TACTGTCGATGCTGC TERM 5961 4717634 - 4717665 + G 75 -4.4 -4.73613 | gap 1, overlap 4717637 TCAGGGACGCGTACT GTCGATGCTGCCAGC CAT GCTG-CTGTATCTAC TTTTCTTCCTGATCC yjgP 4716744 - 4717844 + | hypothetical protein yjgQ 4717841 - 4718926 + | hypothetical protein TERM 5962 4718935 - 4718950 + T 93 -10.4 -4.57882 | opp_overlap 4718935 ATCGTAATCTAACAA GGGAGC GAAA GCTCCC TTTATTATTGTTGAC TERM 5963 4718950 - 4718935 - T 83 -10.4 -3.73336 | opp_overlap 4718935 ATCGTAATCTAACAA GGGAGC GAAA GCTCCC TTTATTATTGTTGAC yjgR 4720547 - 4719045 - | hypothetical protein idnR 4721599 - 4720625 - | L-idonate transcriptional regulator idnT 4722985 - 4721666 - | L-idonate transporter TERM 5964 4723032 - 4723015 - R 100 -12.7 -4.3898 | ATTAGTGCCAGAAAA GCAGCGC TTTC GCGCTGC ACGTAGGGTGGTGGC idnO 4723814 - 4723050 - | gluconate 5-dehydrogenase TERM 5965 4723522 - 4723536 + g 73 -9.2 -3.61398 | GTAAAAGGATGACGG CGCTGG ATA CCGGCG TTATTCACCAGCACA TERM 5966 4723647 - 4723658 + g 81 -5.8 -4.82901 | overlap 4723646 AACGGCCTGAATACC CTCC TGGT GGAG TTTTTCTACAGCAAG idnD 4724869 - 4723838 - | L-idonate 5-dehydrogenase idnK 4725086 - 4725649 + | D-gluconate kinase yjgB 4726714 - 4725653 - | putative oxidoreductase TERM 5967 4726783 - 4726767 - R 70 -9.5 -3.05596 | CATCGCTGTATGCAA TGCTGAA AAT TTCAGCA CTTAGCGAGGTGCGA TERM 5968 4726967 - 4726982 + r 100 -9 -5.28176 | opp_overlap 4726967 4726969 AAAAGTATGTCAATA GACCTC AACT GAGGTC TTTTTTATGCCTGAA SSON_4456 4728399 - 4727686 - | IS600 ORF2 SSON_4457 4728842 - 4728540 - | IS600 ORF1 TERM 5969 4729528 - 4729508 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT SSON_4458 4729449 - 4730288 + | IS911 ORF2 TERM 5970 4730436 - 4730458 + T 85 -6.2 -5.21709 | overlap 4730437 ACCAGCTCCGTGAAT GTCCGCTCTG GCA CAGAGCGAAA TTTTTTGATCTCCCC TERM 5971 4730437 - 4730457 + T 79 -9.7 -3.72302 | overlap 4730436 CCAGCTCCGTGAATG TCCGCTCTG GCA CAGAGCGAA ATTTTTTGATCTCCC TERM 5972 4730741 - 4730723 - T 73 -7.4 -4.10657 | opp_overlap 4730734 TCAGAGTCCGGAAAA GTTCAGCC CCA GTCTGAAC AGGCTTGCTGGCGCC fecE 4731571 - 4730804 - | iron-dicitrate transporter ATP-binding subunit fecD 4732528 - 4731572 - | iron-dicitrate transporter subunit FecD fecC 4733523 - 4732525 - | iron-dicitrate transporter permease subunit TERM 5973 4733502 - 4733472 - G 93 -11.8 -4.22309 | overlap 4733469 AGAAAATAATAATAA GTGCTGCAACGGGA AGC CCCCACAGCAGCAC CGGGTGTTTTATCGC fecB 4734428 - 4733520 - | iron-dicitrate transporter substrate-binding subunit TERM 5974 4734297 - 4734316 + g 86 -6.4 -5.07567 | overlap 4734299 GAACGAGAGTTCCAG CACCACAA TCCG TTGTGGCG TTTTTTCGAGTGTAA TERM 5975 4734457 - 4734442 - R 95 -11.8 -4.19258 | ACATTCCAGCTAAAA GCCCGG CAAG CCGGGC GTTAACACATCAGAA fecA 4736791 - 4734467 - | outer membrane receptor fecR 4737831 - 4736878 - | fec operon regulator FecR fecI 4738349 - 4737828 - | RNA polymerase sigma factor FecI insA 4738641 - 4738916 + | IS1 ORF1 SSON_4467 4738835 - 4739128 + | IS1 ORF SSON_4468 4739129 - 4739338 + | IS1 ORF SSON_4469 4739626 - 4740129 + | IS1 ORF SSON_4470 4741449 - 4741952 + | IS1 ORF yjhS 4743179 - 4742199 - | hypothetical protein TERM 5976 4743236 - 4743217 - R 76 -12.1 -2.69246 | opp_overlap 4743210 4743209, overlap 4743212 4743209 GACAAATTGATAGCA GGGCCCC TTTACC GGGGCCC TGAAGCGTTAGTTTT yjhT 4744458 - 4743244 - | hypothetical protein TERM 5977 4743473 - 4743487 + gr 70 -5 -4.4648 | TCATGCGCATAGTTC TTACCG TTC TGGTAA TTTTCTCGTGAACCT yjhA 4745095 - 4744370 - | hypothetical protein TERM 5978 4746930 - 4746911 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 4746893 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_4474 4745945 - 4746976 + | IS630 orf SSON_4475 4747419 - 4747922 + | IS1 ORF TERM 5979 4750448 - 4750418 - g 70 -6.9 -4.0098 | gap 1 GCGGAAGGCAAAGAA GACC-TGATCCCGA TGCG TCCGGACCACGGTC ATCAGATGCTGGACG uxuA 4749389 - 4750573 + | mannonate dehydratase TERM 5980 4750580 - 4750604 + F 100 -15 -3.58329 | overlap 4750576 AGCCGTTGATACCCA CCGGCATGGC TGCGC GCCGTGCCGG TTCCTTCTTCCTTGC TERM 5981 4750887 - 4750876 - g 86 -5.8 -5.15117 | GAAAACCTGAAAAAA CAGC AACT GCTG TACACCGTGGCGGAA TERM 5982 4750920 - 4750906 - g 70 -4.9 -4.56775 | ACCGTGGCGGAAAAA GGCGC AGAAA GCACC GAGCTGAAAATTATC uxuB 4750654 - 4752114 + | D-mannonate oxidoreductase TERM 5983 4752139 - 4752170 + F 100 -12.5 -4.94243 | TACCCTACAGACTTA CTGGTCAATCAAA CTGATA TTTGGTTGACCAG TTTTCGTTTTTTTGC uxuR 4752329 - 4753102 + | DNA-binding transcriptional repressor UxuR TERM 5984 4753140 - 4753116 - T 74 -8.6 -3.8512 | opp_overlap 4753116 4753124 4753129 4753131 4753132 GACTTATTATAATAA GCGCAAGG GTAAATGTT CCTTGCGC TTTCTTAAATTAAGA TERM 5985 4753116 - 4753140 + T 83 -9.3 -4.2528 | opp_overlap 4753116, overlap 4753124 4753129 4753131 4753132 GACTTATTATAATAA GCGCAAGGG TAAATGT TCCTTGCGC TTTCTTAAATTAAGA yjiC 4754073 - 4753243 - | hypothetical protein SSON_4481 4754717 - 4754214 - | IS1 ORF SSON_4482 4754982 - 4755755 + | hypothetical protein SSON_4483 4756930 - 4755734 - | ISSfl2 ORF TERM 5986 4756767 - 4756792 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 4756747, overlap 4756753 4756768 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT TERM 5987 4757249 - 4757272 + H 79 -2.4 -5.48825 | gap 1, overlap 4757251 TTATTCGCCAAACCA GTCGTCAGGAT CTT AACCTGA-GGC TTTTTTTACCTACTC TERM 5988 4757419 - 4757382 - g 73 -11.3 -2.71681 | overlap 4757393 CAATTTGCTTAATGA TGATGGTAAAACCTGGC AGCA GCCAGGCTCTGCCATCC TGAACGTTTGGCTGA TERM 5989 4757408 - 4757393 - g 85 -10.4 -4.15833 | overlap 4757382 ATGATGATGGTAAAA CCTGGC AGCA GCCAGG CTCTGCCATCCTGAA SSON_4484 4757338 - 4758054 + | hypothetical protein yjiA 4758986 - 4758132 - | putative GTP-binding protein YjiA yjiX 4759302 - 4759099 - | hypothetical protein TERM 5990 4759342 - 4759325 - R 100 -14.1 -4.51812 | TCTGATAAGAACAAA GCCCCGC CGAA GCGGGGC TAAACACGGTTAGTG yjiY 4761517 - 4759352 - | putative carbon starvation protein TERM 5991 4761889 - 4761861 - R 100 -9.6 -5.2291 | gap 1, overlap 4761862 AGATCACAATAAAAA TGCCCCTTCGACG AATG CGT-GAAGGGGCT GGAGCTTAAATCGCA TERM 5992 4761888 - 4761862 - R 95 -13.1 -3.72119 | gap 1, overlap 4761861 GATCACAATAAAAAT GCCCCTTCGACG AATG CGT-GAAGGGGC TGGAGCTTAAATCGC hpaC 4762407 - 4761895 - | 4-hydroxyphenylacetate 3-monooxygenase coupling protein hpaB 4763987 - 4762425 - | 4-hydroxyphenylacetate 3-monooxygenase TERM 5993 4764138 - 4764150 + r 82 -7.7 -4.67904 | GTTTTGTGATCGCGG TCGCT TTT AGCGA TTTTTGACGTTACTA TERM 5994 4764195 - 4764168 - R 100 -14.2 -3.74693 | overlap 4764192 TTTGACGTTACTAAA TCCCCTTGCTCC AGGC GGAGAAAGGGGA ATAGCAGGTGGTGCC SSON_4490 4765641 - 4764928 - | IS600 ORF2 SSON_4491 4766084 - 4765782 - | IS600 ORF1 hpaX 4767781 - 4766405 - | putative 4-hydroxyphenylacetate permease TERM 5995 4767767 - 4767780 + g 74 -2.4 -5.16841 | overlap 4767745 4767766 CTCCGGTATGGCAGG TGAG GTGTCG CTCA TTTTTCTTCCTCTAA TERM 5996 4767941 - 4767895 - R 79 -10.3 -3.53811 | gap 1, opp_overlap 4767871 4767887 4767872 4767929, overlap 4767896 CGGATGCGGCGTAAA CGCCTTATCCGGCCTACGGT TTGGTGCG AGTGTAGGCCGGATAAG-CG CAGCGCATCCGGCAT TERM 5997 4767942 - 4767896 - R 71 -10.3 -2.72144 | gap 1, opp_overlap 4767871 4767887 4767872 4767929, overlap 4767895 GGATGCGGCGTAAAC GC-CTTATCCGGCCTACGGT TTGGTGCG AGTGTAGGCCGGATAAGCGC AGCGCATCCGGCATT hpaI 4768744 - 4767956 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (HHED aldolase) TERM 5998 4768035 - 4767998 - G 76 -9.1 -3.72576 | gap 1, opp_overlap 4767998 GGCCTGCGCACCAAA CCGTGCT-GCCAGCGC TTCGGCG GCGCGGGCGAGCAGGG TGGTGTCAACGCCGA hpaH 4769558 - 4768755 - | 2-oxo-hept-3-ene-1,7-dioate hydratase TERM 5999 4768942 - 4768957 + g 70 -6 -4.20516 | overlap 4768946 GGATGATTCAGCACG CCAGCG GCGA CGCCGG TTTCTTCAATCACGC TERM 6000 4769481 - 4769501 + g 80 -5.4 -4.88736 | gap 1, overlap 4769470 4769478 4769482 GTAATCCAGCGAGAT C-GCGCGGA TCTG TTCGCGCTG TTTTTCTGCCTGATC TERM 6001 4769482 - 4769499 + g 81 -9.1 -4.06182 | overlap 4769470 4769478 4769481 TAATCCAGCGAGATC GCGCGGA TCTG TTCGCGC TGTTTTTCTGCCTGA hpaF 4770049 - 4769669 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpaD 4770910 - 4770059 - | homoprotocatechuate dyoxygenase TERM 6002 4770372 - 4770353 - G 82 -9.2 -4.16842 | overlap 4770369 CTGATCGTCAATAAA GCGGTGCG ATAA CGAACCGC TGGCAAGGACCGCCA hpaE 4772378 - 4770912 - | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase TERM 6003 4771175 - 4771196 + g 71 -9.5 -3.53012 | gap 1 CCACGTCGTTTGCCA GACGTAAGCC TTC GGCTT-CGTC TTTAAACGGCAGCAG hpaG 4773664 - 4772375 - | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase TERM 6004 4774188 - 4774172 - g 72 -8.7 -3.72695 | AGTGTTGCGATTAAA GCCGATC AAT GATCAGC GGAAGCTCTATATCT hpcR 4773936 - 4774382 + | homoprotocatechuate degradative operon repressor TERM 6005 4774401 - 4774411 + T 80 -6.8 -4.67353 | opp_overlap 4774401 TTTAGTATCTGATAA CCAG CGC CTGG TTTTTCCATGGATGG TERM 6006 4774437 - 4774448 + T 72 -3 -4.98531 | GATGGTGGGTTACAC CTTT TCAT AAAG TTTTTGCTTTCCAGG TERM 6007 4774526 - 4774540 + T 74 -7.1 -4.20883 | GTATCAAGATCGTGA CCAGC TTACT GCTGG TTTTGGCCGTTTTTG TERM 6008 4774851 - 4774812 - T 85 -5.6 -5.42862 | gap 1, opp_overlap 4774846, overlap 4774828 4774829 ACAGGCGGAAAAAAA CTG-GGCGGATTACGAAGC GTT GCCGCGTGACCCGCGTCAG AGCACCGCCGCAGCG TERM 6009 4775600 - 4775582 - T 70 -5.2 -4.37886 | opp_overlap 4775583, overlap 4775583 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATTGACGGCATTGC TERM 6010 4776196 - 4776169 - T 95 -12.2 -4.2679 | gap 1, overlap 4776149 TAATCGCCATGAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAAGGAGATTAATCT yjjM 4778577 - 4777771 - | hypothetical protein TERM 6011 4778412 - 4778422 + g 70 -4 -4.69656 | TGAAAAAAGCCTGCT CAAA CAC TTTG TTTTGTTCACTCATT yjjN 4778809 - 4779846 + | putative oxidoreductase TERM 6012 4779874 - 4779900 + T 100 -5.8 -5.90231 | opp_overlap 4779865 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTCTGTTTCT TERM 6013 4779975 - 4779941 - T 100 -18 -3.30124 | opp_overlap 4779941 TTGTAGGCCGCAGAA GGTGTGTAGGTCGCAC CTT ATGCGACCTACACATC AGTCAGGAATTATCC mdoB 4782276 - 4779985 - | phosphoglycerol transferase I TERM 6014 4781272 - 4781258 - G 72 -5.7 -4.54047 | GTACGCGAGATAAAA CCATC CGGGT GATGG GTATCGACTGTCAGG yjjA 4783027 - 4782530 - | hypothetical protein dnaC 4783810 - 4783073 - | DNA replication protein DnaC TERM 6015 4783688 - 4783702 + g 93 -11.4 -4.15703 | ACGTTCGAGAGCGGC GGAGCG GAT CGCTCC TTGTTCTTTCTGCCA dnaT 4784352 - 4783813 - | primosomal protein I TERM 6016 4783909 - 4783923 + g 77 -2.7 -5.07486 | GGCACGACCGATTTG CAGGC TGCGC GCCAG TTTTTGTTGCCACTG TERM 6017 4784406 - 4784443 + r 79 -10.6 -3.53091 | opp_overlap 4784407, overlap 4784407 4784409 ATAACTTTTATAGTA ACACACGGAGGAGAGG AGGCTG TCTCTCATCCGTGTGC TTTAAGCGAGGCAAT TERM 6018 4784407 - 4784442 + r 83 -14.1 -2.71712 | opp_overlap 4784407, overlap 4784406 4784409 TAACTTTTATAGTAA CACACGGAGGAGAGG AGGCTG TCTCTCATCCGTGTG CTTTAAGCGAGGCAA TERM 6019 4784442 - 4784407 - R 83 -13.4 -3.26947 | opp_overlap 4784407 4784406 4784409 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTTAAGCGAGGCAA TERM 6020 4784409 - 4784440 + r 74 -10.9 -2.90496 | opp_overlap 4784407, overlap 4784407 4784406 ACTTTTATAGTAACA CACGGAGGAGAGG AGGCTG TCTCTCATCCGTG TGCTTTAAGCGAGGC yjjB 4784786 - 4784460 - | hypothetical protein yjjP 4785757 - 4784924 - | putative structural protein TERM 6021 4785654 - 4785644 - G 70 -5.4 -4.43397 | TTGCAAAAGAAATAA TCCA CAC TGGA TACAAAGCCGTGTTA TERM 6022 4785673 - 4785661 - G 81 -9.1 -4.05747 | opp_overlap 4785658 CACACTGGATACAAA GCCGT GTT ACGGC TCGCTGTTGCTCAGT SSON_4511 4786637 - 4787140 + | IS1 ORF SSON_4512 4788162 - 4787533 - | IS1 ORF TERM 6023 4787677 - 4787659 - G 86 -3.9 -5.41143 | gap 1 CAGCGCCCAAAAAAA CAGTGCGA TGCG TCG-ACTG CAAGAATAATGCCCG bglJ 4788566 - 4789189 + | DNA-binding transcriptional activator BglJ fhuF 4790015 - 4789227 - | ferric iron reductase involved in ferric hydroximate transport TERM 6024 4789545 - 4789565 + g 73 -11.9 -2.80922 | overlap 4789543 4789541 4789547 GCTGATTAACGTTTC CATTCGCTG CTG CGGCGAATG TGGTGTTGCGTTTTT SSON_4515 4790045 - 4790392 + | putative inner membrane protein rsmC 4792288 - 4791257 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 6025 4792633 - 4792617 - gH 79 -2.2 -5.26316 | overlap 4792618 TGACGCCAGAAAAAA TCGCGA TGCTG CCGCAA GGCAGTCGCTGCAAC holD 4792391 - 4792804 + | DNA polymerase III subunit psi rimI 4792773 - 4793219 + | ribosomal-protein-alanine N-acetyltransferase TERM 6026 4793519 - 4793534 + G 70 -6.8 -4.1347 | gap 1, opp_overlap 4793512 GCGGAAATCTGCACG CCGCTGC CGG GC-GCGG TTTCTCTGCTTAACG yjjG 4793234 - 4793911 + | nucleotidase TERM 6027 4794020 - 4794053 + G 77 -8.9 -4.06419 | gap 1, opp_overlap 4794028, overlap 4794028 ACGTTGTCTCCTTAT TTGCAAGAG-GTGGCG AAG CGCCGCACTTTTGCCA TTATTTCTCACCCGG TERM 6028 4794930 - 4794909 - g 70 -5.9 -4.18018 | gap 1 GCTTCGTATTTAAAA TTCAGG-CCA ACA TGGACCCGAA ACACCGCGACCGCGT prfC 4794002 - 4795591 + | peptide chain release factor 3 TERM 6029 4795602 - 4795627 + F 86 -14.7 -2.68338 | overlap 4795600 4795599 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTCCCTTCCT osmY 4795984 - 4796589 + | periplasmic protein SSON_4527 4796716 - 4796877 + | hypothetical protein TERM 6030 4796927 - 4796909 - f 100 -14.6 -3.67989 | opp_overlap 4796909 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6031 4796909 - 4796927 + F 100 -14.6 -4.28049 | opp_overlap 4796909 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6032 4797366 - 4797376 + G 74 -8.2 -3.90744 | opp_overlap 4797364 CGTTGCAAATGGATA CCGC CGC GCGG TTGTTTGACAGCGGC yjjU 4796999 - 4798072 + | hypothetical protein TERM 6033 4798519 - 4798541 + G 74 -6.2 -4.56775 | overlap 4798530 AAACGTCACGATTTA CCGTGCACTG GCG TGGTTCACGG TTTTTCCGGCAGCCT yjjV 4798069 - 4798851 + | putative deoxyribonuclease YjjV TERM 6034 4799215 - 4799160 - T 73 -9.7 -3.30124 | gap 1, opp_overlap 4799160 4799161 4799204, overlap 4799161 4799194 4799195 CCGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGCG TCTTATCATGCCTAC TERM 6035 4799161 - 4799214 + T 73 -11 -2.56747 | gap 1, opp_overlap 4799160 4799161 4799194 4799195, overlap 4799160 4799204 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 6036 4799214 - 4799161 - T 80 -13.2 -2.57931 | gap 1, opp_overlap 4799161 4799160 4799204, overlap 4799160 4799194 4799195 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 6037 4799299 - 4799318 + T 73 -10 -3.4252 | opp_overlap 4799295 4799294, overlap 4799268 4799267 CGGCGCATAATGCCT GATGCGAC GCTT GTCGCGTC TTATCATGCCTACAA yjjW 4800230 - 4799367 - | putative activating enzyme TERM 6038 4800177 - 4800153 - GT 78 -6.4 -4.57569 | gap 1, overlap 4800155 GCAGCCCTGCAAAAA CAGAGCCAGAC GACT GCCTGGCCC-G TCAACGCAGGAGAAG TERM 6039 4800176 - 4800155 - GT 81 -10.1 -3.90316 | overlap 4800153 AGCCCTGCAAAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA yjjI 4801752 - 4800202 - | hypothetical protein TERM 6040 4802619 - 4802599 - g 100 -9.7 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCAGCGG GCGGCGTGCGTACTG deoC 4802010 - 4802789 + | deoxyribose-phosphate aldolase deoA 4802916 - 4804238 + | thymidine phosphorylase deoB 4804290 - 4805513 + | phosphopentomutase deoD 4805593 - 4806312 + | purine nucleoside phosphorylase TERM 6041 4806346 - 4806369 + T 100 -12.4 -4.87037 | CGATTGTCGTGTTAA GCCGGAGTGG GGGA CTGCTCCGGC TTTTTAGTATCTATT lplA 4807784 - 4806768 - | lipoate-protein ligase A TERM 6042 4807179 - 4807164 - G 72 -4.6 -4.60255 | opp_overlap 4807178 ATAATGGGCGAAAAA GGCCTT GGTT ATGGCC TCGCAAACCTGCTCA TERM 6043 4807387 - 4807402 + g 70 -6.8 -4.07687 | GAGCCTGAGACTTTG CGGTCG CCTT CGACTG TTTTCACCACCAGAT smp 4808456 - 4807812 - | hypothetical protein TERM 6044 4808154 - 4808168 + g 79 -10 -3.75024 | GCTTTCGCCTGAACG GGCGAT AAG ATCGCC TTGTTCGTCATACAC serB 4808562 - 4809530 + | phosphoserine phosphatase TERM 6045 4809558 - 4809532 - f 76 -11.6 -2.6953 | gap 1, overlap 4809531 TGAATCAGAAGTAAT TGCTCGCCCGC CATCCT GCGGGCG-GCA CAGCATTAACGAGGT TERM 6046 4810368 - 4810355 - g 78 -5.2 -4.87665 | GCGCAGCCATAAAAA CCGC TTCGGC GCGG TGAATGAGCTGGGCG sms 4809579 - 4810961 + | DNA repair protein RadA TERM 6047 4811130 - 4811106 - g 72 -5 -4.67641 | gap 1, opp_overlap 4811128, overlap 4811107 ATGCCAAAATTAAAA GCC-CCAGC GCGCAAAA GCTGGAGGC GTTGCACCGTTTTTT TERM 6048 4811972 - 4811944 - g 70 -4.6 -4.56597 | gap 1 GGCGTTCTGCAAAAA GTACGAAGGG-CG TGAG CATCCGTTCGTAC AGGCGTTGATTGATG nadR 4810982 - 4812214 + | nicotinamide-nucleotide adenylyltransferase TERM 6049 4812364 - 4812395 + T 70 -10 -3.10164 | opp_overlap 4812374 4812375, overlap 4812375 ACTAAGGCTGTTGTA GGCCGGAAAAGGCG TTCA CGCCGTATCCGGCA TTCGGTGCTCAATGC TERM 6050 4812385 - 4812374 - T 71 -7.2 -4.09685 | opp_overlap 4812364 4812375, overlap 4812375 TTGTAGGCCGGAAAA GGCG TTCA CGCC GTATCCGGCATTCGG TERM 6051 4812480 - 4812511 + T 83 -10 -4.15508 | opp_overlap 4812490, overlap 4812481 ATTTCTTGGTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTTTACGCATTACTT TERM 6052 4812481 - 4812510 + T 82 -13.5 -3.08581 | opp_overlap 4812490, overlap 4812480 TTTCTTGGTTTGTAG GCCGGATAAGGCG TTCA CGCCGCATCCGGC ATTTTACGCATTACT yjjK 4814188 - 4812521 - | putative ABC transporter ATP-binding protein slt 4814399 - 4816336 + | lytic murein transglycosylase TERM 6053 4816407 - 4816381 - f 85 -12.2 -3.4252 | overlap 4816382 CTTTAGCGAGTACAA CCGGGGGAGGCA TTT TGCTTCCCCCGC TAACAATGGCGACAT TERM 6054 4816406 - 4816382 - f 90 -15.7 -2.65298 | overlap 4816381 TTTAGCGAGTACAAC CGGGGGAGGCA TTT TGCTTCCCCCG CTAACAATGGCGACA TERM 6055 4816468 - 4816487 + G 72 -6.4 -4.3898 | opp_overlap 4816467 4816468 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 4816426 - 4816752 + | Trp operon repressor TERM 6056 4816773 - 4816826 + T 71 -10.2 -2.62463 | gap 1, opp_overlap 4816770 4816772 4816773 4816806, overlap 4816816 TAGGCCTGATAAGAC GCGGCAGCGTCGCATCAGGCA-TCG TGCAC CGAATGCCGGATGCGGCGTGAACGC CTTATCCGTCCTACA yjjX 4817358 - 4816837 - | NTPase TERM 6057 4817192 - 4817207 + g 72 -8.2 -3.76224 | TTTGCTACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA gpmB 4817410 - 4818057 + | phosphoglycerate mutase rob 4818923 - 4818054 - | right origin-binding protein TERM 6058 4819580 - 4819568 - g 74 -6.2 -4.56775 | opp_overlap 4819567 4819568 AGGTTCGCCGAAAAA CGCG ATTAG CGCG GTTCCTGTCATGCCG creA 4819134 - 4819607 + | hypothetical protein creB 4819620 - 4820309 + | DNA-binding response regulator CreB creC 4820309 - 4821733 + | sensory histidine kinase CreC TERM 6059 4822465 - 4822479 + G 77 -2.8 -5.13521 | opp_overlap 4822465 GACCTTAACCAGCAA CTGG CCGCATC CCAG TTTTTTAGGTGATTT creD 4821791 - 4823143 + | hypothetical protein TERM 6060 4823183 - 4823154 - T 100 -13.7 -4.64144 | opp_overlap 4823160, overlap 4823160 AATAAGGTTGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTT TTGACGGTGGTAAAG TERM 6061 4823160 - 4823177 + T 100 -12.7 -5.76949 | opp_overlap 4823154 4823160 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTTGACGGTG TERM 6062 4823177 - 4823160 - T 100 -12.7 -5.61881 | opp_overlap 4823160, overlap 4823154 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTTGACGGTG arcA 4823919 - 4823203 - | two-component response regulator TERM 6063 4823428 - 4823440 + g 71 -9.1 -3.44051 | opp_overlap 4823415 CATGGCGCGGAACTC GCTGC GCG GCAGC TTGTACTGCTCGCCA yjjY 4824015 - 4824155 + | hypothetical protein lasT 4824555 - 4825241 + | putative RNA methyltransferase SEQUENCE gi|74314838|ref|NC_007385.1| Shigella sonnei Ss046 plasmid pSS_046, complete sequence (length 214396) SSON_P002 493 - 275 - | IS2 ORF2 TERM 1 929 - 913 - gH 74 -11.5 -2.79183 | opp_overlap 913 TGCACTGGTATCAGA CCCGGGG CTT CCCCGGA TGATCTCCACGGTAC SSON_P001 485 - 949 + | putative resolvase, fragment TERM 2 1575 - 1549 - g 72 -5.3 -4.57275 | opp_overlap 1555, overlap 1555 TAAAAAAAGCGAAAA TAAAAACAGTA AACGA TACTGATTTTA AAGAGTATAATAAGG TERM 3 1569 - 1555 - g 100 -4.3 -5.49568 | opp_overlap 1555, overlap 1549 AAGCGAAAATAAAAA CAGTA AACGA TACTG ATTTTAAAGAGTATA ospB 1176 - 2042 + | OspB TERM 4 2201 - 2230 + F 84 -10.3 -3.92143 | opp_overlap 2203 2226, overlap 2226 ATCATTCTTTTACCA CATTATTTTTCGT GAAT ATGAAAAATAATG TTATTACTTTAATAT phoN2/apy 2371 - 3111 + | PhoN2 (Apy) TERM 5 3556 - 3569 + G 70 -5.3 -4.32649 | opp_overlap 3556 TTGCATTGTCAAGCA TAGTG TCCC CACTA TTTGCTTTTTGAAAT SSON_P005 3363 - 3581 + | hypothetical protein TERM 6 4714 - 4695 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 4677 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_P006 3729 - 4760 + | IS630 orf ospD2 7200 - 5491 - | OspD2 TERM 7 5785 - 5803 + g 84 -3.8 -5.28778 | AAATGCCATAAAAAG TCCTGATG TAC CGTTGGGA TTTTTTATCCATAAT TERM 8 7275 - 7258 - R 72 -5.5 -4.44797 | opp_overlap 7259, overlap 7259 TTACTAATAGTAAAA GCCTCCT TACA AGGAGGT AGCTTATTCAGAATG ospF 8351 - 7632 - | OspF SSON_P010 9060 - 8476 - | hypothetical protein SSON_P011 9968 - 9390 - | hypothetical protein TERM 9 11615 - 11596 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 11578 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_P012 10630 - 11661 + | IS630 orf SSON_P013 11846 - 11667 - | IS21 ORF2 SSON_P014 12450 - 12094 - | IS91 orf SSON_P015 12635 - 12450 - | putative IS91 ORF2 SSON_P016 12798 - 13082 + | putative transposase TERM 10 13075 - 13065 - T 76 -2.4 -5.40072 | CCGGTGGTAAAAAAA CGTC CCC GGCG GCCTTAATGCCAGTC TERM 11 13082 - 13111 + T 89 -9.3 -4.59109 | overlap 13084 TCCCCGGCGGCCTTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 12 13084 - 13109 + T 100 -16.3 -3.90762 | overlap 13082 CCCGGCGGCCTTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG SSON_P017 13665 - 13093 - | IS4 orf SSON_P018 13793 - 14140 + | ISSfl4 ORF2 TERM 13 14201 - 14186 - g 72 -10.4 -3.40522 | opp_overlap 14185 ACTTGCTCATGAGAA TGCCCG CCTG CGGGCA CTGTTGCAGACGCAA SSON_P019 14160 - 15392 + | putative IS orf, fragment SSON_P020 16042 - 16200 + | putative transposase, fragment SSON_P021 16197 - 16367 + | putative transposase, fragment ospD1 16954 - 17631 + | OspD1 SSON_P023 18337 - 18113 - | hypothetical protein TERM 14 18510 - 18541 + H 76 -8.2 -4.14472 | gap 1, opp_overlap 18509 18513 18515 18516, overlap 18514 18515 18536 CTTCATAACTACAAC TAACAGGGCATCATT ATG AATGATGCCG-GTTA TTTTACCGCTGTTGG TERM 15 18537 - 18515 - H 70 -9.2 -3.31854 | opp_overlap 18515 18514 18510 18536, overlap 18513 18509 18516 TAACTACAACTAACA GGGCATCATT ATG AATGATGCCG GTTATTTTACCGCTG TERM 16 18536 - 18516 - H 78 -12.7 -2.58389 | opp_overlap 18515 18514 18510, overlap 18515 18513 18509 AACTACAACTAACAG GGCATCATT ATG AATGATGCC GGTTATTTTACCGCT ipgB2 18740 - 19306 + | IpgB2 SSON_P025 19878 - 20177 + | IS3 ORF1 TERM 17 20454 - 20427 - g 75 -4.7 -4.74504 | overlap 20428 20429 ACTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG GCTGAGGGCAAAGGC SSON_P026 20174 - 21043 + | IS3 ORF2 TERM 18 21808 - 21828 + F 100 -15.5 -3.46848 | overlap 21798 TCCAGGGGGTAATCT GCTCTCCTG ATT CAGGAGAGC TTATGGTCACTTTTG TERM 19 21880 - 21865 - g 70 -4.6 -4.56914 | overlap 21866 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC SSON_P027 21831 - 22835 + | IS100 ORF1 TERM 20 23190 - 23165 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 23173, overlap 23166 23180 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 21 24170 - 24198 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA SSON_P028 23027 - 24223 + | ISSfl2 ORF TERM 22 25442 - 25422 - g 100 -5.3 -5.47159 | overlap 25433 25436 CGGCAATACAAAAAA GGCAGGAAA ATT TACCCCGCC CCGTCATTGACAGAG SSON_P029 24497 - 25624 + | putative transposase SSON_P030 26092 - 26307 + | iso-IS1 ORF2 TERM 23 26562 - 26542 - f 72 -8.3 -3.66784 | opp_overlap 26543 26546 GCATTTTTAATATAA GCATGTACA ATA TGTACTTGC ATGCATTACCCTGCT TERM 24 26573 - 26584 + F 100 -5.8 -5.9873 | overlap 26564 CTTGCATGCATTACC CTGC TAAT GCAG TTTTTTTTGTAATAA TERM 25 27331 - 27316 - g 81 -6.1 -4.80453 | TTAGGACAAAACAAA CACGC GATATT GCGTG AGAATATTATTGATA parA 26629 - 27828 + | plasmid segregation protein parB 27828 - 28808 + | plasmid segregation protein SSON_P033 29064 - 29549 + | putative transposase, fragment SSON_P034 30437 - 29838 - | hypothetical protein TERM 26 30231 - 30256 + gT 71 -6.9 -4.13014 | gap 1, opp_overlap 30231 GTCATATCCGAGAAA GGTGAAAC-TCG TTG CGACGTTTCTCC TTTTAAACGTGTCAA SSON_P035 30964 - 30380 - | hypothetical protein TERM 27 31179 - 31207 + H 70 -8.9 -3.36968 | ACGAATGGGTCCGCC CCTGTTTCCCG ATACGTG CCGGAAACAGG TTCTCACGTTCCCTG TERM 28 32435 - 32415 - g 77 -9.7 -3.59979 | overlap 32419 32429 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 29 32431 - 32419 - g 75 -6.9 -4.44046 | overlap 32415 32429 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_P036 31617 - 32765 + | IS21 ORF1 SSON_P037 32765 - 33562 + | IS21 ORF2 SSON_P038 34777 - 33890 - | IS629 ORF2 TERM 30 34457 - 34469 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA SSON_P039 35052 - 34777 - | IS629 ORF1 TERM 31 36022 - 36012 - g 79 -4.6 -5.00616 | overlap 36013 36014 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 32 36557 - 36543 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 33 36653 - 36641 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG SSON_P040 35770 - 36969 + | IS1294 orf TERM 34 37067 - 37055 - T 72 -4.8 -4.64844 | TGCAGAGAGAGAAAA CACC GGAGT GGTG GGGAAAAACAGAAAG virF 38012 - 37224 - | VirF TERM 35 37675 - 37699 + g 100 -2.7 -5.95539 | opp_overlap 37676 37677, overlap 37677 37678 AACAAATCGATAGAA ACCTCCTCCTC AGA GAGGAGGAATA TTTTTTTGTTTAACC TERM 36 37695 - 37676 - G 83 -10 -4.11897 | opp_overlap 37675 37677 37678, overlap 37677 ACAAATCGATAGAAA CCTCCTCC TCAG AGAGGAGG AATATTTTTTTGTTT TERM 37 37697 - 37677 - G 75 -11.9 -3.06054 | opp_overlap 37677 37675 37678, overlap 37676 CAAATCGATAGAAAC CTCCTCCTC AGA GAGGAGGAA TATTTTTTTGTTTAA TERM 38 37677 - 37697 + g 95 -9.7 -4.61687 | opp_overlap 37676 37677, overlap 37675 37678 CAAATCGATAGAAAC CTCCTCCTC AGA GAGGAGGAA TATTTTTTTGTTTAA TERM 39 37678 - 37696 + g 89 -13.2 -3.34572 | opp_overlap 37676 37677, overlap 37677 37675 AAATCGATAGAAACC TCCTCCTC AGA GAGGAGGA ATATTTTTTTGTTTA TERM 40 39456 - 39436 - g 100 -5.3 -5.47159 | overlap 39447 39450 CGGCAATACAAAAAA GGCAGGAAA ATT TACCCCGCC CCGTCATTGACAGAG SSON_P042 38511 - 39638 + | putative transposase SSON_P043 40072 - 40359 + | IS2 ORF2 TERM 41 40515 - 40505 - f 75 -2.6 -5.1925 | overlap 40497 CTATAATGTAAAAAA TAAA TTC TTTA CTAAAATATAACATA ospE2 40541 - 40807 + | OspE2 SSON_P045 41594 - 41178 - | ISSfl2 ORF TERM 42 41753 - 41766 + r 72 -8.1 -3.78934 | GCGCAAGTTTGCAGA GCTGG GCTG CCAGC TTCTTCTCACCCAGC SSON_P046 42318 - 41773 - | ISSfl2 ORF TERM 43 42221 - 42246 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 42201, overlap 42207 42222 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT SSON_P047 42373 - 42645 + | hypothetical protein TERM 44 42887 - 42877 - g 79 -4.6 -5.00616 | overlap 42878 42879 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 45 43422 - 43408 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA TERM 46 43518 - 43506 - g 73 -9.1 -3.66095 | AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG SSON_P048 42626 - 43834 + | IS1294 orf TERM 47 43932 - 43920 - f 72 -4.8 -4.64844 | TGCAGAGAGAGAAAA CACC GGAGT GGTG GGGAAAAACAGAAAG TERM 48 45218 - 45208 - g 70 -4 -4.68384 | AGTCATTCAATAAAA TTCA GTC TGAA GGAATATGCACAAAA ospC1 44739 - 46151 + | OspC1 ospD3 46480 - 48177 + | OspD3 SSON_P051 48854 - 48324 - | IS600 ORF2 SSON_P052 49297 - 48995 - | IS600 ORF1 TERM 49 49658 - 49647 - g 75 -4.4 -4.83243 | TGTACATAAAATAAA GCTT ACAG AAGC TATCAGGAAATTACG SSON_P053 49336 - 49803 + | hypothetical protein TERM 50 50099 - 50089 - f 82 -5.4 -5.1356 | CCCCAGCAACAAAAA GAGA TTG TCTC GCTCGTCACATCGGG TERM 51 50697 - 50678 - g 78 -8.6 -4.25104 | opp_overlap 50694, overlap 50694 GTTTTGGCACCAAAA TCCATCTG GCAA CAGACGGA AGTGGCCTCCCGTTA SSON_P054 50243 - 50713 + | ISSfl1 ORF1 SSON_P055 50719 - 51108 + | ISSfl1 ORF2 TERM 52 52208 - 52189 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 52171 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_P056 51223 - 52254 + | IS630 orf SSON_P057 52525 - 52274 - | hypothetical protein TERM 53 53799 - 53781 - g 76 -7.4 -4.21933 | overlap 53770 TGAATGGGAAAAGAA CTCTTCTC CCG GGGAAGAG CGAGGCATTGCTTTT TERM 54 54314 - 54326 + G 70 -4.1 -4.62471 | opp_overlap 54314 TTAATCAGATAACCA CTCTT CCG GAGAG TTTTTCACAATTAGA ipaH7.8 53671 - 55368 + | invasion plasmid antigen ipaH4.5 55796 - 57520 + | invasion plasmid antigen SSON_P060 57572 - 57898 + | IS629 ORF1 TERM 55 58218 - 58206 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SSON_P061 57898 - 58785 + | IS629 ORF2 TERM 56 59590 - 59580 - g 79 -4.6 -5.00616 | overlap 59581 59582 GTCCTGCGGAAAAAA GGCC ACA GACC TGTGGATAGCGACAC TERM 57 60125 - 60111 - g 73 -9.2 -3.65046 | TCGTTATCTGAAGAA GCCGCC GAT AGCGGC CTCCCGGCTGGCACA SSON_P062 59338 - 60243 + | IS1294 orf TERM 58 60465 - 60453 - f 72 -4.8 -4.64844 | TGCAGAGAGAGAAAA CACC GGAGT GGTG GGGAAAAACAGAAAG TERM 59 60978 - 60959 - g 78 -8.6 -4.25104 | opp_overlap 60975, overlap 60975 GTTTTGGCACCAAAA TCCATCTG GCAA CAGACGGA AGTGGCCTCCCGTTA SSON_P063 60545 - 60994 + | ISSfl1 ORF1 SSON_P064 61000 - 61389 + | ISSfl1 ORF2 TERM 60 61506 - 61496 - T 85 -5.4 -5.29716 | TCAATATAACAAAAA TGAC AAC GTCA GATTCAGGGCACAAC ospC2 62992 - 61538 - | OspC2 TERM 61 61630 - 61643 + g 70 -5.3 -4.32649 | opp_overlap 61630 TTGCATTGTCAAGCA TAGTG TCCC CACTA TTTGCTTTTTGAAAT SSON_P066 63417 - 63713 + | ISSfl1 ORF1 insB 63936 - 64439 + | IS1 ORF2 TERM 62 64627 - 64608 - g 78 -8.6 -4.25104 | opp_overlap 64624, overlap 64624 GTTTTGGCACCAAAA TCCATCTG GCAA CAGACGGA AGTGGCCTCCCGTTA SSON_P068 64523 - 64885 + | ISSfl1 ORF2 SSON_P069 66087 - 65173 - | IS1294 orf TERM 63 65291 - 65305 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 64 65826 - 65836 + g 79 -4.6 -5.00616 | overlap 65821 65820 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC SSON_P070 66340 - 66068 - | hypothetical protein SSON_P071 66947 - 66360 - | ISSfl4 ORF1 TERM 65 66951 - 66978 + H 75 -9.9 -3.61398 | CTGGGAATTCATCGT TCGTGTCCATC AATATA GATGGGCGCGA TTGTTGCCAGACAGG TERM 66 68725 - 68712 - g 70 -5.3 -4.32649 | opp_overlap 68712 ATTTCAAAAAGCAAA TAGTG GGGA CACTA TGCTTGACAATGCAA ospC3 67363 - 68817 + | OspC3 SSON_P073 69155 - 69457 + | IS600 ORF1 SSON_P074 69598 - 70311 + | IS600 ORF2 SSON_P075 70436 - 70678 + | putative IS orf SSON_P076 70733 - 71155 + | IS1353 putative transposase-like protein SSON_P077 71276 - 71611 + | IS21 ORF1 TERM 67 71666 - 71616 - gT 85 -3.1 -5.31877 | gap 1 AGTCAGCATAAAAAA TCCCGACAACAG-CGGCCAGGCGC TCCC GCTCACGTATGTCTGTTGCCGGGA GCAGGCAGAGGACGG TERM 68 71726 - 71713 - gT 87 -9.5 -4.26903 | opp_overlap 71724, overlap 71714 CTGACGTCAGGAAAA GCGGC GAGT GCCGC CGATGCACGACGTAT SSON_P078 71581 - 71874 + | hypothetical protein SSON_P079 72970 - 72065 - | insertion element IS2 transposase InsD SSON_P080 73293 - 72928 - | insertion sequence 2 OrfA protein TERM 69 73465 - 73507 + r 88 -12.8 -3.55444 | opp_overlap 73471 TGAGGGTTACCTGGT GATGAAGTCTCTTGATCAGG AGC TCTGATCAAGAGACAGCAGC TTTGGGGGGTGCCCC TERM 70 73501 - 73471 - R 100 -17.1 -3.14564 | opp_overlap 73465 TTACCTGGTGATGAA GTCTCTTGATCAG GAGCT CTGATCAAGAGAC AGCAGCTTTGGGGGG SSON_P081 74738 - 73542 - | ISSfl2 ORF TERM 71 74575 - 74600 + g 71 -3.3 -4.74518 | gap 1, opp_overlap 74555, overlap 74561 74576 ATCTGACCATGTTGT TTCAGGTCAGAT ATT AGC-GACCTGAG TTTGTTTTCGTCGTT SSON_P082 75934 - 74930 - | IS100 ORF1 TERM 72 75885 - 75900 + g 70 -4.6 -4.56914 | overlap 75886 GCCCGGCTACTCATT CCCTGC TTGT GCAGGA TTTTAATTTCCATAA TERM 73 75957 - 75937 - H 100 -15.5 -3.46848 | overlap 75927 CAAAAGTGACCATAA GCTCTCCTG AAT CAGGAGAGC AGATTACCCCCTGGA SSON_P083 76173 - 76373 + | hypothetical protein ipaJ 77287 - 78066 + | IpaJ virB 79941 - 79012 - | VirB TERM 74 79458 - 79470 + g 77 -3.4 -5.14477 | GAGTGACTTTCGCGC GAGA CAGAT TCTC TTTTTTGGCTATGTC TERM 75 79879 - 79890 + g 72 -4.4 -4.68655 | TTTATTACCAGAATG GAGT GTAA ACTC TTTCTTTTGGCCTTC acp 80394 - 80158 - | Acp TERM 76 80368 - 80378 + g 100 -2.6 -5.86976 | ATAGCAAAAGGCCAC TATT GAT AATA TTTTTTCTTTTATCA ipaA 82299 - 80398 - | IpaA TERM 77 80570 - 80531 - G 76 -12.4 -2.60723 | gap 1, opp_overlap 80539, overlap 80530 TCATCTGTAAGTAAT TCTGCAGAGGTATCGTCAA TTT TTGACAATACCT-TGCTGA GGGCGCTAGATACTT TERM 78 80539 - 80563 + g 70 -10.1 -3.14344 | opp_overlap 80531 80530 AAGTAATTCTGCAGA GGTATCGTCAA TTT TTGACAATACC TTGCTGAGGGCGCTA TERM 79 81138 - 81148 + g 70 -5.4 -4.38712 | AATTATCTGGAGTAT GGTT GAA AACC TTTTCTAAAGCTGAA TERM 80 81606 - 81619 + g 73 -3.9 -4.77896 | CTATACCAAATCCTT TACTA TCAA TAGTA TTTTTACGTTGATTG TERM 81 81661 - 81649 - G 72 -7.7 -3.8901 | GCGCAAACTATCAAA GGCAA GTT TTGCC TGTGCGTCAACTAAA ipaD 83306 - 82308 - | IpaD TERM 82 83021 - 82991 - G 81 -12.8 -3.14132 | opp_overlap 82977 82991 TTGCGTCTTTATTAA TTGGATATTCGTTC CTG GAAAGAATATCCAA TAGTTGAGCGGATTT TERM 83 82991 - 83021 + g 77 -12.8 -2.7186 | opp_overlap 82991, overlap 82977 TTGCGTCTTTATTAA TTGGATATTCGTTC CTG GAAAGAATATCCAA TAGTTGAGCGGATTT ipaC 84448 - 83357 - | IpaC TERM 84 84173 - 84156 - G 74 -9.9 -3.42373 | opp_overlap 84146, overlap 84147 84154 GAAAGACTGGAAATA TCCAGAG TGTT CTCTGGA GTAAGGGTGTGACTC TERM 85 84481 - 84504 + r 73 -11.2 -2.66255 | opp_overlap 84491, overlap 84462 84479 TATCAAGCAGTAGTT TGTTGCAAAA TTGC TTTTGCAACA TCAGTTCTATTAGCC ipaB 86210 - 84468 - | IpaB TERM 86 85011 - 85025 + g 83 -5.7 -5.0538 | opp_overlap 85009 85011 TGCCCCCAGAATAGA GCCAA TCATT TTGGC TTTTTTCGAGTCGAC TERM 87 85241 - 85231 - G 71 -3.2 -4.82901 | overlap 85196 85233 GCTCCTCCAGAAAAA GCTG CTG CAAC AACACTAACGATAGT TERM 88 85537 - 85553 + g 70 -3.7 -4.67234 | opp_overlap 85537 GTGTTTGAAAATGCA GAAAAAG AGT CTATTTC TTTTTCGAGTTGCAT ipgC 86683 - 86216 - | IpgC TERM 89 86521 - 86504 - G 79 -4.1 -5.07275 | opp_overlap 86504 86505, overlap 86505 GTATATACATAAAAA TCTGAAG AAAA CTTCAGC TTCCTCTATTCTTCC ipgB1 87367 - 86741 - | IpgB1 ipgA 87772 - 87383 - | IpgA TERM 90 87652 - 87641 - G 70 -4.4 -4.57341 | opp_overlap 87641 AAGTCCGGTCAAAAA GATG TATT CATC ATTATCTGTTATACA TERM 91 87655 - 87675 + g 70 -4.8 -4.44667 | AGATGTATTCATCAT TATCTGTT ATACA AACAGGTA TTTGTTCTTCGAGCA TERM 92 87726 - 87698 - G 70 -6.1 -4.23674 | opp_overlap 87699, overlap 87699 TTCGAGCAATATAAA GGCTTGATTTTTA TCG TTAAAATCAAGCT TTGCACCTGTTATTT TERM 93 87699 - 87725 + g 73 -9.6 -3.62176 | opp_overlap 87698 87699 TCGAGCAATATAAAG GCTTGATTTTTA TCG TTAAAATCAAGC TTTGCACCTGTTATT icsB 89269 - 87785 - | IcsB TERM 94 87901 - 87918 + g 73 -3.5 -4.86216 | opp_overlap 87891, overlap 87891 AATAATCAATAGTTT TTATTGA CTTT TCGATAA TTTCTTCTTTTTTAT TERM 95 88397 - 88412 + g 76 -7.6 -4.1721 | ATTTGCCAATTGTCT GAAAGC ATCT GCTTTC TTTTGGCATATAAAT TERM 96 88529 - 88552 + g 100 -2.4 -5.95166 | overlap 88533 TACTTTATCAGCACT GACCCC CCAATAACCATA GGGGTC TTTTTTTTGATTAGC TERM 97 88533 - 88550 + g 75 -5.5 -4.61485 | overlap 88529 TTATCAGCACTGACC CCCCAAT AACC ATAGGGG TCTTTTTTTTGATTA ipgD 89583 - 91199 + | IpgD ipgE 91209 - 91571 + | IpgE ipgF 91571 - 92029 + | IpgF mxiG 92038 - 93153 + | MxiG mxiH 93161 - 93412 + | MxiH mxiI 93425 - 93718 + | MxiI TERM 98 93735 - 93745 + G 71 -2.6 -5.00467 | TTATATGATTAGGTA TAAA GGT TTTA TTTTATTCTTGTTGC mxiJ 93724 - 94449 + | MxiJ TERM 99 94949 - 94939 - g 71 -3.2 -4.74706 | TGCAATATGCAAAAA GGCA CTT TACC GGTATCCAGACATCA mxiK 94446 - 94973 + | MxiK mxiN 94915 - 95610 + | MxiN TERM 100 95637 - 95620 - g 70 -4.9 -4.58308 | gap 1, overlap 95629 GATTAATCAAATAAA TGCA-AGC AAT GCTCTGCA GCAAAGATTAAATAG mxiL 95603 - 96010 + | MxiL mxiM 95994 - 96422 + | MxiM mxiE 96552 - 97184 + | MxiE TERM 101 98614 - 98630 + G 70 -3.7 -4.60143 | GAAACGAACTCTAAC GAAATAG TAT CTATTCC TTTTCTCTCCTCTAT mxiD 97171 - 98871 + | MxiD mxiC 98890 - 99957 + | MxiC TERM 102 100833 - 100856 + G 74 -6 -4.55016 | TACATCAGCTCTTGC CTTGGCGATA GGGA TGTTGCCAGG TTTTCCGTTTTTTGT mxiA 99964 - 102030 + | MxiA spa15 102043 - 102444 + | Spa15 TERM 103 102834 - 102851 + G 74 -2.6 -5.02476 | opp_overlap 102834 GCTATATAGTGAAAG GGCTGC AATTGA GAAGCC TTTTTTAACAGGTAT TERM 104 103661 - 103637 - g 74 -6.5 -4.46212 | CCTCTCAGGATAAAA TCTACAACAAA ATA TCTGTTGTTGA GAGTTTTCTGAAGCA spa47 102448 - 103740 + | ATP synthase SpaL spa13 103833 - 104171 + | Spa13 TERM 105 104467 - 104445 - g 71 -2.1 -4.93877 | GGCCATTAAAGAAAA TATTTTGAT ACCAG ATCAAGATA TAAAAGCAAGGGAAA TERM 106 104500 - 104490 - g 79 -4 -5.08015 | AAGGGAAAAAATAAA TATC GGC GATA TGAGGGGGATCTTTT TERM 107 104777 - 104767 - g 79 -4 -5.08601 | TCATTGCAAGAAAAA TCAA TAG TTGA AAATGATAAAAATGT spa32 104158 - 105036 + | Spa32 TERM 108 105192 - 105202 + G 76 -4 -5.00616 | opp_overlap 105201 TGGGTAATTCGTATT GATA CAT TATC TTTTTTGAAAAAAAA spa33 105030 - 105911 + | Spa33 spaP 105916 - 106566 + | surface presentation of antigens protein SpaP spa9 106581 - 106841 + | Spa9 spa29 106841 - 107611 + | Spa29 spa40 107618 - 108646 + | surface presentation of antigens protein SpaS SSON_P118 108668 - 108901 + | hypothetical protein TERM 109 109473 - 109456 - T 82 -11.3 -3.57561 | opp_overlap 109466, overlap 109466 109467 GCTGAACTGGCTAAA GGCCTCA AAAC TGAGGCC GACCTCAATCAGTTT SSON_P119 110098 - 109478 - | IS600 ORF2 SSON_P120 110541 - 110239 - | IS600 ORF1 SSON_P121 110830 - 112365 + | putative transposase TERM 110 112440 - 112421 - g 100 -15 -3.76952 | CTGACCCAACTGAAA CTCCCGGC GATG GCCGGGAG CCTGATACGGCAACG TERM 111 112591 - 112567 - g 93 -5.8 -5.24531 | gap 1 ACGGTTGAGAAAAAA TGCCTGCCTGA AATA TCAGGCA-ACA CCGGAAGGGCTGCGT SSON_P122 112382 - 113137 + | putative transposase SSON_P123 113272 - 113460 + | IS600 ORF2 SSON_P124 113840 - 113457 - | IS3 ORF2 TERM 112 113560 - 113587 + g 75 -4.7 -4.74504 | overlap 113535 113535 GCCTTTGCCCTCAGC CCCTGACGGCG CAGGCT TGCCGCCACGG TTTTTACGTTAAAGT SSON_P125 114136 - 113837 - | IS3 ORF1 TERM 113 114627 - 114647 + r 73 -11.2 -2.66316 | opp_overlap 114646 TCACTTTCCGTTACT GGTGCTGT CCGTC ACAGCACC TCATGTCCTGCGGAC SSON_P126 115871 - 115155 - | hypothetical protein TERM 114 116389 - 116420 + r 84 -10.8 -3.9442 | overlap 116387 116391 GACAATGTCATGCTC TCGCCCGTTCCGGT AATA AACGGAGCGGGCTA TCTTTTTGGAATATT TERM 115 116391 - 116418 + r 90 -13.4 -3.54926 | overlap 116389 116387 CAATGTCATGCTCTC GCCCGTTCCGGT AATA AACGGAGCGGGC TATCTTTTTGGAATA SSON_P127 116656 - 116456 - | putative transposase, fragment SSON_P128 117219 - 116887 - | hypothetical protein SSON_P129 117401 - 117727 + | IS629 ORF1 TERM 116 118047 - 118035 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SSON_P130 117727 - 118179 + | IS629 ORF2 TERM 117 119095 - 119075 - g 77 -9.7 -3.59979 | overlap 119079 119089 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 118 119091 - 119079 - g 75 -6.9 -4.44046 | overlap 119075 119089 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA SSON_P131 118277 - 119425 + | IS21 ORF1 SSON_P132 119425 - 120222 + | IS21 ORF2 SSON_P133 120320 - 120748 + | IS629 ORF2 SSON_P134 120978 - 120751 - | putative transposase, fragment SSON_P135 121582 - 121226 - | IS91 orf SSON_P136 122004 - 121582 - | putative IS91 ORF2 TERM 119 121960 - 121978 + g 75 -4.6 -4.84359 | opp_overlap 121962, overlap 121962 CATATAACTACCTGA AAGACAAT GAT ATTGTCTG TTTTTATAACGGTAA TERM 120 121962 - 121976 + g 70 -7.2 -4.04397 | opp_overlap 121962, overlap 121960 TATAACTACCTGAAA GACAAT GAT ATTGTC TGTTTTTATAACGGT SSON_P137 122906 - 122667 - | putative reverse transcriptase, fragment TERM 121 122772 - 122802 + g 72 -10.6 -3.05876 | gap 1, overlap 122761 122759 122769 122796 AGCAGTACTTCGGCC TCGCTGGATACTG TGATTC CAGTA-CCAGCGA TCCTTTCTGGCTTTT SSON_P138 123138 - 122938 - | putative reverse transcriptase, fragment SSON_P139 123295 - 123053 - | IS3 ORF2 SSON_P140 123831 - 123268 - | IS629 ORF2 SSON_P141 124156 - 123938 - | IS629 ORF1 TERM 122 124286 - 124299 + r 82 -3.1 -5.45726 | overlap 124287 AATAGTTTATAGAGC TGTTC TGAA GAACG TTTTTTTACAGTCTG virA 125537 - 124335 - | VirA TERM 123 124610 - 124629 + g 73 -4.2 -4.78933 | TAATAACTCGTTGTT CAGGCATG AAAT TAAGCCTG TTTTCTATGTTTTCG TERM 124 125797 - 125780 - H 76 -4.2 -4.96848 | GGGTGTATAGAAAAA CAAAGT GGTTAA ACTTTG GGCAAGCGTACAGAA icsA/virG 126066 - 129374 + | IcsA/VirG TERM 125 129407 - 129384 - f 81 -5.2 -5.18726 | opp_overlap 129384 TTCTGATAATAAAAA TGCAGGGCGT GTTG ATGTCCTGCA TTTCTCTGGGACCCA TERM 126 129384 - 129407 + F 83 -9.6 -4.03234 | opp_overlap 129384 TTCTGATAATAAAAA TGCAGGGCGT GTTG ATGTCCTGCA TTTCTCTGGGACCCA TERM 127 129419 - 129442 + F 100 -10.2 -4.84359 | TGCATTTCTCTGGGA CCCACCGTGT AAAA GCTCGGTGGG TTTTTGTGCACATGA TERM 128 129668 - 129681 + G 74 -2.3 -5.0916 | ATATATGACTCTACT GTACC AGCT GGAAC TTTTTCTATTCAGGA TERM 129 129778 - 129761 - g 81 -4.9 -5.10163 | overlap 129756 AATGGTAAAAGAAAA CATTTCC AAGT AGAAATG TGCAGGTGTGCCTTT SSON_P144 129560 - 129817 + | adhesion protein, fragment SSON_P145 130009 - 130335 + | IS629 ORF1 TERM 130 130651 - 130639 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC SSON_P146 130607 - 131212 + | IS629 ORF2 TERM 131 131588 - 131573 - gf 100 -2.6 -6.07627 | ACCGTTAAAAAAAAA CATTAC GCTA ATAATG TTCACCCTGTCATTA TERM 132 132925 - 132915 - gf 74 -8.2 -3.88498 | GTGGCACAGATGAAA CCGG ATT CCGG AGCCTACCCACAATT ushA 131553 - 133205 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 133 133295 - 133307 + GT 73 -4.1 -4.85822 | TTTGCGATATGGGAA TGCAG TTG CTGTA TTTTGTGTTTCTGCT SSON_P148 133174 - 133359 + | hypothetical protein SSON_P149 134239 - 133712 - | hypothetical protein TERM 134 134130 - 134105 - G 90 -11.3 -3.91144 | gap 1, opp_overlap 134105 GTCATATCCGAGAAA GGAGAAAC-TCG TAG CGACGTTTCTCC TTTTAAACGTGTCAA TERM 135 134105 - 134130 + g 91 -11.3 -4.13014 | gap 1, opp_overlap 134105 GTCATATCCGAGAAA GGAGAAAC-TCG TAG CGACGTTTCTCC TTTTAAACGTGTCAA SSON_P150 134568 - 134323 - | hypothetical protein TERM 136 134424 - 134402 - GR 100 -20.6 -3.02144 | overlap 134380 TCACTCCGCGCAACA CGGGCCAGCC AGT GGCTGGCCCG TCGTCGGTGGCCCCT SSON_P151 135665 - 134538 - | putative reverse transcriptase, fragment TERM 137 135001 - 134987 - GR 78 -12.8 -2.62616 | opp_overlap 134987, overlap 134975 GCAGGGGGGAGATTA CGCCGC CCT GCGGCG TTCCTCGACCCCGTG TERM 138 134987 - 135001 + gr 81 -12.8 -3.14344 | opp_overlap 134987 134975 GCAGGGGGGAGATTA CGCCGC CCT GCGGCG TTCCTCGACCCCGTG TERM 139 135483 - 135503 + gr 72 -6 -4.40993 | TGTCTGCCCGTCAAT GCCTGCCG CCCCA CGGTTGGC TTTTACTCGTTTATA SSON_P152 135878 - 135678 - | IS600 ORF2 SSON_P153 136925 - 136020 - | insertion element IS2 transposase InsD SSON_P154 137248 - 136883 - | insertion sequence 2 OrfA protein SSON_P155 137665 - 137447 - | putative IS orf, fragment SSON_P156 138358 - 137720 - | hypothetical protein TERM 140 137956 - 137972 + g 75 -6.6 -4.43221 | opp_overlap 137958 TAGAAATCATTACTA CACTTC CTTTT GAAGTG TTTTGTAAAATATTT TERM 141 139549 - 139528 - g 81 -13.1 -2.64243 | opp_overlap 139528 139532, overlap 139532 GGACATCTGACATCA CAAATCCCC GGGT GGGGATTTG TGTATAAGAGACAGC TERM 142 139528 - 139549 + G 82 -13.1 -2.87132 | opp_overlap 139528 139532, overlap 139532 GGACATCTGACATCA CAAATCCCC GGGT GGGGATTTG TGTATAAGAGACAGC SSON_P157 139323 - 139556 + | IS100 ORF2 TERM 143 139532 - 139545 + T 76 -8.1 -4.12532 | opp_overlap 139532 139528, overlap 139528 ATCTGACATCACAAA TCCCC GGGT GGGGA TTTGTGTATAAGAGA TERM 144 139545 - 139532 - T 76 -8.1 -4.01888 | opp_overlap 139528 139532, overlap 139528 ATCTGACATCACAAA TCCCC GGGT GGGGA TTTGTGTATAAGAGA SSON_P158 139898 - 139608 - | hypothetical protein TERM 145 139670 - 139683 + gT 73 -3.9 -4.82901 | CGGTTTCAGCATCCA TTATG CCGT CATAA TTTTTCTGCCGGAAA SSON_P159 140118 - 139867 - | sugar phosphate transport protein-like protein insB 140818 - 141321 + | IS1 ORF2 SSON_P161 141439 - 141912 + | hypothetical protein SSON_P162 142748 - 141951 - | IS21 ORF2 TERM 146 142162 - 142178 + g 71 -2.9 -4.8048 | AACCCTTTGTTTGAC GTCAGCA TGA TGCTCGC TTTTTCATATCGACG SSON_P163 143674 - 142748 - | IS21 ORF1 TERM 147 143078 - 143098 + g 77 -9.7 -3.59979 | overlap 143074 143082 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 148 143082 - 143094 + g 75 -6.9 -4.44046 | overlap 143074 143078 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC SSON_P164 143931 - 144233 + | IS600 ORF1 SSON_P165 144374 - 145087 + | IS600 ORF2 SSON_P166 145341 - 145595 + | putative IS orf, fragment TERM 149 146592 - 146572 - g 72 -5.3 -4.45259 | overlap 146573 AAATGGGAAAAACAA GCGCTCCCC GGT GAAGAGCGT GATGAGGCTGTCTCC ipaH9.8 146464 - 148101 + | invasion plasmid antigen TERM 150 148228 - 148243 + F 72 -10.4 -2.82635 | GAGTGCCGCCTTACA TGCCGC TGGC GCGGCA TATCCTGGTGACGAT SSON_P168 148309 - 148578 + | hypothetical protein TERM 151 148764 - 148778 + G 70 -5 -4.53303 | CTGGACCACACAAGG TAGCGT GTA ACGTTA TTTTGTGTGAAAATC yacB 148652 - 148801 + | hypothetical protein TERM 152 149357 - 149343 - g 82 -2.9 -5.26875 | GCTGCAACCAAAAAA GATAA AGAGA TTATC GACCGACGATTACAA ospG 148830 - 149420 + | OspG mob9 149667 - 149488 - | plasmid mobilization protein TERM 153 150036 - 150026 - g 82 -2.4 -5.40072 | opp_overlap 150034 CCGGTGGTAAAAAAA CGTC CCC GGCG GCCTAATGCCGATCA SSON_P172 149825 - 150067 + | putative IS orf TERM 154 150116 - 150091 - f 72 -9.1 -3.61398 | opp_overlap 150091 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 155 150091 - 150116 + F 100 -9.8 -5.61596 | opp_overlap 150091 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT SSON_P173 150124 - 151452 + | IS4 orf TERM 156 151463 - 151434 - T 89 -9.3 -4.59109 | overlap 151436 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TAAGGCCGCCGGGGA TERM 157 151461 - 151436 - T 100 -16.3 -3.90762 | overlap 151434 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAAGGCCGCCGGG TERM 158 151470 - 151480 + T 76 -2.4 -5.40072 | GACTGGCATTAAGGC CGCC GGG GACG TTTTTTTACCACCGG SSON_P174 151705 - 151463 - | putative IS orf TERM 159 151828 - 151801 - H 76 -4.7 -4.74504 | overlap 151802 151803 ACTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG GCTGAGGGCAAAGGC SSON_P175 151803 - 152021 + | IS3 ORF2 SSON_P176 154921 - 152009 - | hypothetical protein TERM 160 153799 - 153788 - G 71 -2.2 -4.91511 | ACTCCATGAGAAAAA GCTC GGAT GAAC TATCTGATTGGCATC SSON_P177 155244 - 155546 + | IS600 ORF1 SSON_P178 155687 - 156400 + | IS600 ORF2 SSON_P179 156722 - 157513 + | hypothetical protein SSON_P180 157516 - 158604 + | hypothetical protein TERM 161 158643 - 158654 + G 72 -4.4 -4.67552 | TATCATTTATCGGTT TCCT TAAA AGGA TTGTTTTTTCCTCAG TERM 162 159458 - 159477 + G 70 -6.4 -4.28069 | AGTAAAAAACGCTCT GAGTATCG AAAA CGATACGC TTTGTTGGATTATAT virK 158609 - 159559 + | VirK TERM 163 159821 - 159801 - g 72 -5.3 -4.48072 | opp_overlap 159803 159817, overlap 159802 159803 AGATTGAGCAGAAAA GCTCGTCGC AGG GCGACGATT AATTTATCGCTTTGT TERM 164 159819 - 159803 - g 76 -12.3 -2.5639 | opp_overlap 159803 159817, overlap 159802 159801 ATTGAGCAGAAAAGC TCGTCGC AGG GCGACGA TTAATTTATCGCTTT TERM 165 159803 - 159819 + G 88 -12.3 -3.63662 | opp_overlap 159803 159802 159801, overlap 159817 ATTGAGCAGAAAAGC TCGTCGC AGG GCGACGA TTAATTTATCGCTTT msbB2 159624 - 160568 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase SSON_P183 161753 - 160722 - | IS630 orf TERM 166 160768 - 160787 + g 74 -2.2 -5.03145 | gap 1, opp_overlap 160780 GGGAATGGGCTGACG GTTT-CCAT AAA ATGGCGAAC TTTTTTCAACAGTTG TERM 167 162229 - 162217 - g 79 -4.7 -5.00616 | CCCCGGGGTAAAAAA GCGTC CCC GGCGC CCCAACTTCCCTTAT SSON_P184 161897 - 162565 + | putative transposase TERM 168 162645 - 162678 + F 74 -10.4 -3.14211 | gap 2 TCTCTTGTGCAGCAT GGC-TGCA-CAGGGAC TCAC GTCCCTGGTGCGCGCC TTCGTGGCACACCAT TERM 169 162807 - 162793 - f 78 -12.8 -2.62616 | opp_overlap 162793, overlap 162781 GCAGGGGCGAGATCA CGCCGC CCT GCGGCG TTCCTTCTGTCACCG TERM 170 162793 - 162807 + F 88 -12.8 -3.49618 | opp_overlap 162781 162793 GCAGGGGCGAGATCA CGCCGC CCT GCGGCG TTCCTTCTGTCACCG TERM 171 163357 - 163330 - g 76 -11.2 -3.38072 | TCGATGGAACAGCAA TCAGCGCGCCCG GGGG CGGCAGCGCTGA ATGGCGACTACATAT SSON_P185 162929 - 163357 + | hypothetical protein TERM 172 164032 - 164047 + G 81 -9 -4.07568 | opp_overlap 164032 TAATTGACGACATAA TCCAGC CATC GCTGGA TTTTCCCCCCAGAAG TERM 173 164047 - 164032 - g 71 -9 -3.56161 | opp_overlap 164032 TAATTGACGACATAA TCCAGC CATC GCTGGA TTTTCCCCCCAGAAG SSON_P186 163371 - 164087 + | IS186 ORF1 TERM 174 164137 - 164111 - f 81 -3.6 -5.34365 | opp_overlap 164111, overlap 164105 GGAGAATAACAAAAA TGGTCATCTGGA GCT TACAGGTGGCCA TTCGTGGGACAGTAT TERM 175 164327 - 164359 + F 71 -6.9 -4.18401 | overlap 164334 CGCCGCCGGCTCCGC TTTACCCGGCCATGC GGG GCATGGCCTTGTGGG TTTTCAGCTCTGTAG TERM 176 164334 - 164352 + F 95 -14.6 -3.52113 | overlap 164327 GGCTCCGCTTTACCC GGCCATGC GGG GCATGGCC TTGTGGGTTTTCAGC TERM 177 164919 - 164935 + G 78 -10.9 -3.47583 | overlap 164911 CCGTACCGTGAGTGC TGATGCC GCA GGCATCA TTCTGACTTCTCTTG SSON_P187 164665 - 165012 + | putative antirestriction protein SSON_P188 165069 - 165371 + | IS600 ORF1 SSON_P189 165512 - 166225 + | IS600 ORF2 traD 166425 - 168626 + | conjugal transfer protein TraD TERM 178 168745 - 168775 + G 78 -11 -3.55842 | opp_overlap 168746, overlap 168746 CGATCATTTGATCAA ATGGCCCGACAGGG CGT CCCTGACGGGCAAG TTCTGCTCTTATCTG TERM 179 168746 - 168774 + G 90 -14.5 -2.72782 | opp_overlap 168746, overlap 168745 GATCATTTGATCAAA TGGCCCGACAGGG CGT CCCTGACGGGCAA GTTCTGCTCTTATCT TERM 180 168774 - 168746 - g 100 -14.5 -3.75169 | opp_overlap 168746 168745 GATCATTTGATCAAA TGGCCCGACAGGG CGT CCCTGACGGGCAA GTTCTGCTCTTATCT trbH 168626 - 169345 + | hypothetical protein TERM 181 170890 - 170878 - g 70 -4.1 -4.60487 | overlap 170879 GACCAGGGCGAAAAA CTCTC CCT GAAAG AGACGTTAACCCTGC TERM 182 171480 - 171470 - g 86 -6.8 -5.00616 | TCCGGCCGGAAAAAA TGCC GGT GGCA GACGGTGAGCGTCTG TERM 183 171683 - 171703 + G 75 -5.4 -4.67353 | gap 1 AAACGCCCGGGCATT CCGTCAGCG ACAG TGC-GACGG TTTTTGCCTCCGTCA SSON_P192 169342 - 173625 + | oriT nicking and unwinding protein, fragment SSON_P193 173682 - 173984 + | IS600 ORF1 SSON_P194 174125 - 174838 + | IS600 ORF2 TERM 184 175823 - 175798 - g 100 -13.4 -4.07568 | GGTTGCCCGGGAAAA TCTGCTGCAG GAGCGT CTGCAGCAGA TGGAGCGGGATATGG SSON_P195 175043 - 175879 + | oriT nicking and unwinding protein, fragment TERM 185 175874 - 175863 - f 71 -3.6 -4.84918 | TGCAGAAAGAGAAAA CCCC GGGC GGAG ACTGATACAGGAAGA TERM 186 176333 - 176348 + F 74 -8.2 -3.85698 | opp_overlap 176316, overlap 176317 GGCCATTCTTCTGAT GGCCCT GTTG GGGGCC TTTGTCCGGCACCAG TERM 187 177072 - 177058 - g 95 -7 -5.24129 | overlap 177060 CTCTCGCATAAAAAA CTGCGC AGG GCGCTG AAGGCCATCACCCGT finO 176701 - 177261 + | conjugal transfer fertility inhibition protein FinO TERM 188 177287 - 177268 - f 100 -8.6 -6.28967 | gap 1 GAGAAATAAAAAAAA GCCTCCATC AGA GA-GGAGGC AGGGAAATAAGGCTT TERM 189 177403 - 177392 - gf 71 -3 -4.77567 | AGGGGGACAAGAAAA TGAA TGGA TTCA GAAACAGTTCACGGA yigA 177391 - 177603 + | hypothetical protein TERM 190 177645 - 177612 - gf 100 -7.5 -5.26875 | gap 1, overlap 177613 GGTGTAACGAAAAAA GCAGCCTTCATTACTC CAG GAGTCA-GAAGGCTGA AAGGAGTTTATGAGA TERM 191 177644 - 177613 - gf 86 -11 -3.75402 | gap 1, overlap 177612 GTGTAACGAAAAAAG CAGCCTTCATTACTC CAG GAGTCA-GAAGGCTG AAAGGAGTTTATGAG SSON_P199 177395 - 177658 + | hypothetical protein SSON_P200 177847 - 178308 + | hypothetical protein hmo 178354 - 178563 + | putative regulator insB 179365 - 178862 - | IS1 ORF2 TERM 192 180441 - 180429 - g 72 -6.3 -4.37092 | AGTTCGTTGAGAAAA TCATC AAA GATGA ACTGCAGAGACTGGA repB 180209 - 180469 + | replication protein TERM 193 180641 - 180595 - f 100 -9 -5.1417 | gap 1 CCAGAAAAGCAAAAA CCCCGATAATCTTCTTTAACT TTGGCG AGTCAGA-AAGATTACCGGGG CCCACTTAAACCGTA TERM 194 180888 - 180870 - g 70 -5.9 -4.22346 | opp_overlap 180869 180870 180872 GAAACTGATGGAAAA GGCGGTG GGCTT CACCTCC CGTTTTGATTTCGCC repA 180760 - 181617 + | replication protein TERM 195 181653 - 181638 - f 83 -10.4 -3.79113 | ACCTCCTCAGAATAA TCCGGC ACGC GCCGGA GGCATTCGCACGCCT TERM 196 182154 - 182104 - f 100 -21.2 -2.57132 | opp_overlap 182104 182110, overlap 182088 182085 182110 GCCCCTCCTCATAAC TGAAAAGCGCCGCTGCCCCCGCCC GAA GGGCGGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 197 182104 - 182154 + F 100 -16.8 -3.43961 | opp_overlap 182088 182085 182104 182110, overlap 182110 GCCCCTCCTCATAAC TGAAAAGCGCCGCTGCCCCCGCCC GAA GGGCGGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 198 182110 - 182148 + F 100 -15.8 -4.50058 | opp_overlap 182088 182085 182104 182110, overlap 182104 CCTCATAACTGAAAA GCGCCGCTGCCCCCGCCC GAA GGGCGGGAACAGAGTCGC TTTTAATTATGAATG TERM 199 182148 - 182110 - f 100 -20.2 -4.3208 | opp_overlap 182110 182104, overlap 182088 182085 182104 CCTCATAACTGAAAA GCGCCGCTGCCCCCGCCC GAA GGGCGGGAACAGAGTCGC TTTTAATTATGAATG SSON_P206 182317 - 182508 + | hypothetical protein SSON_P207 182527 - 182832 + | hypothetical protein SSON_P208 182829 - 183116 + | hypothetical protein TERM 200 183251 - 183263 + T 72 -4.8 -4.64844 | CTTTCTGTTTTTCCC CACC ACTCC GGTG TTTTCTCTCTCTGCA SSON_P209 184548 - 183349 - | IS1294 orf TERM 201 183665 - 183677 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 202 183761 - 183775 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 203 184296 - 184306 + g 79 -4.6 -5.00616 | overlap 184291 184290 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC SSON_P210 184802 - 185026 + | ISSfl1 ORF2 TERM 204 185227 - 185210 - g 73 -9.1 -3.57561 | overlap 185220 185221 GCTGAACTGGCTAAA GGCCTCA AAAC CGAGGCC GACCTCAATCAGTTT SSON_P211 185165 - 185332 + | putative transposase ipaH1.4 187077 - 185350 - | invasion plasmid antigen TERM 205 187109 - 187089 - R 72 -5.5 -4.51174 | opp_overlap 187090, overlap 187083 187090 TCATTATAACTAAAA TTTCTTATC AAT GATAAGAAT TCTAGTGAAATAGAA TERM 206 187090 - 187108 + r 70 -9 -3.41602 | opp_overlap 187089 187083 187090 CATTATAACTAAAAT TTCTTATC AAT GATAAGAA TTCTAGTGAAATAGA TERM 207 187108 - 187090 - R 70 -9 -3.29981 | opp_overlap 187090, overlap 187089 187083 CATTATAACTAAAAT TTCTTATC AAT GATAAGAA TTCTAGTGAAATAGA TERM 208 187760 - 187770 + r 82 -2.6 -5.55698 | overlap 187754 187759 TATGTTATATTTTGG TAAA AAA TTTA TTTTTTTACATTATA SSON_P214 189200 - 188127 - | IS91 orf TERM 209 188902 - 188917 + g 73 -9 -3.63805 | ATCCCCGACTCCACA TCTGCC TGAT GGCAGA TTTCCAGTATCACAT SSON_P215 189499 - 189314 - | putative IS91 ORF2 SSON_P216 190265 - 189552 - | IS600 ORF2 SSON_P217 190708 - 190406 - | IS600 ORF1 SSON_P219 191003 - 190770 - | putative IS91 ORF2 TERM 210 190825 - 190839 + gH 74 -10 -3.44284 | opp_overlap 190824 190825, overlap 190824 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA TERM 211 190839 - 190825 - GH 70 -10 -2.95111 | opp_overlap 190825 190824, overlap 190824 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA SSON_P218 190993 - 191184 + | IS630 orf TERM 212 191235 - 191247 + Tr 72 -4.8 -4.64844 | CTTTCTGTTTTTCCC CACC ACTCC GGTG TTTTCTCTCTCTGCA SSON_P220 192541 - 191333 - | IS1294 orf TERM 213 191649 - 191661 + g 73 -9.1 -3.66095 | CTCGCGACCAGCTCA CGCTG TGT CAGCG TTTCCGTCGCCGTTT TERM 214 191745 - 191759 + g 73 -9.2 -3.65046 | TGTGCCAGCCGGGAG GCCGCT ATC GGCGGC TTCTTCAGATAACGA TERM 215 192280 - 192290 + g 79 -4.6 -5.00616 | overlap 192275 192274 GTGTCGCTATCCACA GGTC TGT GGCC TTTTTTCCGCAGGAC SSON_P222 192794 - 192522 - | hypothetical protein TERM 216 193017 - 192998 - gH 74 -2.2 -5.03145 | gap 1, opp_overlap 192980 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_P221 192788 - 193063 + | IS630 orf wzz 193478 - 194518 + | O antigen chain length determinant protein TERM 217 194523 - 194505 - f 70 -2.4 -4.91977 | opp_overlap 194505 CATTAAAAGATAAAA CCAAGTTA GAT TAAACTGG GTTACGTATTGTTGT wbgT 194554 - 195867 + | putative UDP-glucose 6-dehydrogenase TERM 218 195897 - 195883 - f 82 -2.9 -5.53991 | opp_overlap 195883 GAGTGATTAAAAAAA TCAAA TCCTC TTTGA TATGATACACCTCAG wbgU 195948 - 196985 + | putative UDP-glucose 4-epimerase wzx 197086 - 198354 + | transporter wzy 198423 - 199595 + | putative polysaccharide polymerase TERM 219 200677 - 200658 - g 74 -2.2 -5.03145 | gap 1, opp_overlap 200640 CAACTGTTGAAAAAA GTTCGCCAT TTT ATGG-AAAC CGTCAGCCCATTCCC SSON_P228 199692 - 200723 + | IS630 orf TERM 220 200923 - 200938 + G 93 -6.2 -5.17054 | opp_overlap 200923 CGAGATTTCAATTGA TGATTC TGAA GAATCA TTTTTTGGCTATTAT wbgV 200756 - 202000 + | putative glycosyltransferase TERM 221 202678 - 202702 + G 78 -5.1 -4.82333 | opp_overlap 202685, overlap 202679 ATAATTTTAAAGATT TCATAAAGAAA GGT TTTCTTGATGG TTTTTGGGTTGTTAT TERM 222 202887 - 202903 + G 74 -2.9 -5.02287 | GGGCGAAGTTTTATA GGTAGAG TAT TTCTTCC TTTTATATTTTTGTC wbgW 201993 - 202979 + | putative glycosyltransferase wbgX 202976 - 204130 + | putative glycosyltransferase TERM 223 204174 - 204189 + G 100 -10.4 -5.22289 | TTTGATGTTATCGTG GCAGGC TTAG GCCTGC TTTTTCTATTTCCTG wbgY 204147 - 204737 + | putative glycosyltransferase TERM 224 206651 - 206633 - g 84 -3.9 -5.31275 | gap 1, opp_overlap 206621 206642 TGGCAGCAGAAAAAA TCGC-TGT TATC ACAAGCGA GCAATGTCATTCGCC wbgZ 204752 - 206671 + | putative epimerase/dehydratase TERM 225 206806 - 206824 + G 74 -8.8 -3.95555 | opp_overlap 206799 TGTTTAAACCTTTTA GCGCCGAA TTT TTCGGCAC TTTCTGGCTGGTTCT TERM 226 207062 - 207086 + G 71 -10.7 -2.85351 | overlap 207064 CGCTCAGGTTATCGG CGGTATTGCCG CTG CGGCAGTGCTG TATGGTATCGCCAGC TERM 227 207257 - 207244 - g 76 -3.7 -4.99035 | opp_overlap 207244 207247 GGAGCGACAGAAAAA CGCGC TCCT GCGGG CTTTGCGCCACTGGC SSON_P234 206790 - 207302 + | putative aquaporin SSON_P235 207506 - 207781 + | IS629 ORF1 SSON_P236 208172 - 207903 - | putative transposase SSON_P237 209389 - 208316 - | IS91 orf TERM 228 209091 - 209106 + g 73 -9 -3.63805 | ATCCCCGGCTCCACA TCTGCC TGAT GGCAGA TTTCCAGTATCACAT SSON_P238 209868 - 209503 - | putative IS91 ORF2 TERM 229 209747 - 209761 + g 74 -10 -3.44284 | opp_overlap 209746 209747, overlap 209746 TCAAAACTATCAAAG CGCAGA ACT TCTGCG TCTTCTTCGTCAAAA TERM 230 210012 - 209992 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 231 210364 - 210353 - g 77 -5.8 -4.63218 | opp_overlap 210358 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG SSON_P239 209915 - 210772 + | IS911 ORF2 SSON_P240 211488 - 210796 - | hypothetical protein TERM 232 212898 - 212920 + H 100 -2.1 -6.4275 | ATCTATGGCCCCCGT TACTTTATT CGCAC AATGAGGTA TTTTTTTTATTTTTA icsP/sopA 213078 - 214025 + | outer membrane protease SEQUENCE gi|145294025|ref|NC_009345.1| Shigella sonnei Ss046 plasmid pSS046_spA, complete sequence (length 8401) tetR 1124 - 474 - | hypothetical protein TERM 1 1499 - 1510 + G 70 -7.2 -4.11275 | overlap 1489 CGACTACGCCATCAT GGCG ACGG CGCC TTTCCTTTGGGTTCT tetA 1155 - 2429 + | TetA TERM 2 3083 - 3054 - f 76 -4.5 -5.02231 | gap 1, opp_overlap 3054, overlap 3045 3048 TAAAAACAGCAAAAA CTGTATTTATAACA ATG TGTT-TATATACAG TATTCGAAATACTAC TERM 3 4175 - 4154 - f 70 -9.5 -2.99142 | overlap 4153 GTCAGGAAGAATAAC CCGTTCATG CAGG CATGAACGA TACAGTGAGGAACGC TERM 4 4304 - 4277 - f 74 -10.6 -3.15999 | opp_overlap 4277 TGGTCATACACCTAA CGCAGCCGCGAT TTTC ATCGCAACTGCA TGAATTAAAAGAAAA TERM 5 4418 - 4399 - f 100 -9.4 -5.24515 | AATAAAGAAATAAAA GGTAATAC CGGA GTATTACC ACGTACGCGGGCAAG TERM 6 4914 - 4924 + F 84 -8.2 -4.66609 | opp_overlap 4909 GAAGAGATAAGGCCA CGGC GAA GCCG TTTTTCCATAGGCTC TERM 7 5410 - 5441 + F 100 -16 -3.53012 | opp_overlap 5418, overlap 5418 AACTGACTTAACCTT CGAACAAACCGCCT CCCC AGGCGGTTTTTTCG TTTACAGAGCAAGAG TERM 8 5418 - 5433 + F 100 -10.4 -5.37593 | opp_overlap 5418, overlap 5410 TAACCTTCGAACAAA CCGCCT CCCC AGGCGG TTTTTTCGTTTACAG TERM 9 5433 - 5418 - f 87 -10.4 -4.1673 | opp_overlap 5418 5410 TAACCTTCGAACAAA CCGCCT CCCC AGGCGG TTTTTTCGTTTACAG TERM 10 5491 - 5475 - f 74 -7.3 -4.20084 | opp_overlap 5475 ACGATTCATTGAAAA GGATCTC AAG AAGATCC TTTGTAGATTACTAT TERM 11 5624 - 5613 - f 79 -3 -5.4148 | opp_overlap 5613 5615 CAAAGAAGCAAAAAA GATA AATA TATC TACTTATTGAGAGAT TERM 12 6301 - 6313 + G 82 -3.3 -5.24531 | overlap 6302 CCGCCTTGTCCTTGA TCCCG GCA TGGGG TTTTTTCTGGGGGCT sulII 5780 - 6595 + | SulII strA 6656 - 7459 + | StrA TERM 13 8166 - 8192 + G 72 -10.2 -3.38564 | gap 1, overlap 8155 GCTGGACGTCGATCC GCGT-CGCCTG CTCGAC CAGGCGTACGC TTATGGGTGCCTTTC strB 7459 - 8295 + | StrB SEQUENCE gi|145294031|ref|NC_009346.1| Shigella sonnei Ss046 plasmid pSS046_spB, complete sequence (length 5153) TERM 1 217 - 194 - g 77 -5.9 -4.72029 | overlap 196 198 CTCAATTGAAGAAAA CGCAGGCAG AACAGG CTGCCCGAG CAAAAGCTGCCGCAG cea 1 - 1566 + | colicin E1 protein TERM 2 1621 - 1587 - T 100 -15.9 -4.0641 | overlap 1589 CTTTATTGATATAAA CAGTCCTAGCAATCC AAATG GGATTGCTAGGACCA AACAAAGTAGATTGT imm 1904 - 1563 - | colicin E1 immunity protein TERM 3 1619 - 1589 - G 100 -18.5 -3.6269 | overlap 1587 TTATTGATATAAACA GTCCTAGCAATCC AAATG GGATTGCTAGGAC CAAACAAAGTAGATT lys 1952 - 2089 + | colicin E1 precursor lysis protein TERM 4 2101 - 2117 + T 91 -7.3 -5.61596 | opp_overlap 2094 2101, overlap 2094 GTAGAAAAGATCAAA GGATCTT CTT GAGATCC TTTTTTTCTGCGCGT TERM 5 2181 - 2150 - T 86 -11.6 -3.53012 | opp_overlap 2158, overlap 2158 TCTGCTGCCTGTAAA CGAAAAAACCGCCT GGGG AGGCGGTTTGATCG AAGGTTAAGTCAGTT TERM 6 2173 - 2158 - T 100 -10.4 -5.37593 | opp_overlap 2158, overlap 2150 CTGTAAACGAAAAAA CCGCCT GGGG AGGCGG TTTGATCGAAGGTTA TERM 7 2158 - 2173 + T 83 -10.4 -3.737 | opp_overlap 2150 2158 CTGTAAACGAAAAAA CCGCCT GGGG AGGCGG TTTGATCGAAGGTTA TERM 8 2212 - 2184 - T 70 -9.8 -3.05384 | gap 1 GGCGGTTTGATCGAA GGTTAAGTCAGTT GGGG AACTG-CTTAACC GAGGTAACTGGCTTC SSON_PB04 2743 - 2372 - | hypothetical protein TERM 9 2710 - 2700 - G 88 -8.2 -4.66609 | opp_overlap 2699 2701 2708, overlap 2701 GAGCCTATGGAAAAA CGCC TGC GGCG CTGGCTTCTTCCGGT rom 3125 - 2931 - | RNAI modulator protein mobA 3409 - 3732 + | hypothetical protein exc 4376 - 3957 - | entry exclusion protein 2 TERM 10 4006 - 4019 + g 74 -2.3 -5.03314 | overlap 4004 4007 GCAGAAATCGTGTCA GCCAG CAGC CTGGA TTTTTTCGGGGTAAG TERM 11 4132 - 4142 + g 70 -5.4 -4.37534 | ATGCGTTGTTGCACA TCAC TCC GTGA TTTTCCTGTCGCTTT exc1 4876 - 4457 - | entry exclusion protein 1 SEQUENCE gi|145294040|ref|NC_009347.1| Shigella sonnei Ss046 plasmid pSS046_spC, complete sequence (length 2101) TERM 1 917 - 893 - g 74 -8.6 -3.95219 | gap 1, opp_overlap 893 892, overlap 894 TGGAAACCGGAGAAA CGCGC-CTACG GCTT CGTAGTGCGCA ATTTTGCCGTGTCCG TERM 2 1468 - 1487 + G 85 -8.6 -4.52589 | gap 1 TTTCTTGAGCTGACG CGGCAGCTT CAC AAGC-GCCG TTTTATCTCGACCGG rep 703 - 1668 + | hypothetical protein