TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.38127 %AT, 5677408 nt, 57762 terms. Intergenic: 0.424467 %AT, H2T: 676369 nt, 6363 terms; T2T: 219006 nt, 4601 terms; H2H: 301098 nt, 5798 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|150375726|ref|NC_009620.1| Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence (length 1570951) TERM 1 962 - 910 - g 76 -13.4 -3.14132 | gap 1 CGGCGCCGGCACGAA GGCGATCGAGCGGAAAGCGACGGCA GAGG CGAAGACGCTTTC-GCTCGAGCGCC TGCAGCTACAGGAGG TERM 2 1397 - 1359 - g 78 -5.1 -4.70583 | CGGACGAACAGAAAA CGGCGATCGAGCATGTT GCGAA AGCCGGCCGGATCGCCG CTGTAATCGGTCGTG Smed_3575 197 - 3505 + | Ti-type conjugative transfer relaxase TraA Smed_3576 4121 - 4504 + | Kup2 potassium uptake protein Smed_3577 4501 - 4878 + | hypothetical protein Smed_3578 6639 - 5353 - | extracellular solute-binding protein TERM 3 6819 - 6848 + G 71 -8.5 -3.91144 | gap 1, opp_overlap 6810 6807 GAAGACTCCGCCAAG CCGACATCGCCGCC CAT GCCGGCG-TATCGG TTTCTACCGTCTCGC Smed_3579 6785 - 7819 + | periplasmic binding protein/LacI transcriptional regulator TERM 4 7995 - 8023 + G 83 -9.5 -4.26076 | overlap 7992 7996 GCCGATCTGGAAGGC TTTGCAAGGCCTC TTT GGGGCCTTGCACC TTTTGCTGCCGGTGG TERM 5 7996 - 8022 + G 73 -13 -3.15324 | overlap 7992 7995 CCGATCTGGAAGGCT TTGCAAGGCCTC TTT GGGGCCTTGCAC CTTTTGCTGCCGGTG TERM 6 9019 - 9003 - g 95 -10.9 -4.56597 | opp_overlap 9005, overlap 9013 TTCGGCTCGGAAAAA TACGCGA AAT TCGCGTA TTCCGCGCGCTACGC Smed_3580 7809 - 9662 + | hypothetical protein Smed_3581 9659 - 10666 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Smed_3582 10663 - 11472 + | xylose isomerase domain-containing protein TERM 7 11855 - 11813 - g 72 -12 -3.35224 | gap 1, opp_overlap 11813 11850, overlap 11811 ATATTTGTTCAAAGA GGCCGCAC-GGGGTTACGC CTGGAT GCGCAAACCCAACGCGGCC TTCGGTGGCTTCTCG Smed_3583 11544 - 11954 + | hypothetical protein Smed_3584 11948 - 12646 + | RES domain-containing protein Smed_3585 13468 - 12701 - | short-chain dehydrogenase/reductase SDR TERM 8 13258 - 13236 - G 93 -14.8 -4.05788 | opp_overlap 13254 GCCGCCGAAATCAAA TCGCCGCCGG CAC CGGGCGGCGA AAGCTCGCCTTGGAT TERM 9 13315 - 13334 + g 95 -10.6 -4.42386 | overlap 13316 TTATTGCCTGTTCGA CCCCGGCG GTTG CGCCGGGC TTTTGTCCGTGCAGG TERM 10 13316 - 13333 + g 76 -14.1 -3.2511 | overlap 13315 TATTGCCTGTTCGAC CCCGGCG GTTG CGCCGGG CTTTTGTCCGTGCAG Smed_3586 15187 - 13478 - | SMP-30/gluconolaconase/LRE domain-containing protein Smed_3587 16146 - 15166 - | NAD-dependent epimerase/dehydratase TERM 11 15867 - 15829 - G 73 -10.9 -3.60792 | opp_overlap 15858, overlap 15831 CCCGGAACTTGCAAA GACGAAGCGGCCGAC CTTTGCCGC GACGGCCGCCTCGGC CACGATGCGCGTCCC TERM 12 15865 - 15831 - G 72 -12.1 -3.38314 | opp_overlap 15858, overlap 15829 CGGAACTTGCAAAGA CGAAGCGGCCGAC CTTTGCCGC GACGGCCGCCTCG GCCACGATGCGCGTC TERM 13 16124 - 16106 - G 72 -2.2 -4.77165 | overlap 16108 TGCCTGACAACAAAA GAGCCGAC CCT GCCGGCAG AACCCGTCACAAGCA TERM 14 16122 - 16108 - G 76 -9.2 -4.00512 | overlap 16106 CCTGACAACAAAAGA GCCGAC CCT GCCGGC AGAACCCGTCACAAG Smed_3588 17236 - 16148 - | ABC transporter related Smed_3589 18068 - 17238 - | binding-protein-dependent transport systems inner membrane component Smed_3590 18985 - 18080 - | binding-protein-dependent transport systems inner membrane component TERM 15 19011 - 19034 + r 100 -16.7 -3.79787 | TGGTTTTTGCCAGGA CCCGGCGCC GCCGCA GGCGCCGGG TTTCCCTTCATGTGC TERM 16 19245 - 19278 + r 84 -16.3 -2.66316 | gap 1, opp_overlap 19234, overlap 19243 GAAATCGATCATGTT C-ATGTCTTTAGGTCG GCC CGACCTAAAGACATCG TGATCTACTGAAGCG Smed_3591 20548 - 19283 - | extracellular solute-binding protein TERM 17 19780 - 19818 + g 71 -8.7 -3.90112 | gap 1, overlap 19781 19807 19808 CATCGGCGAAGAGTT TCCGGACCTCGCCCG-CC GAGA GGTCGCGCGGGGTCAGGC TTTCCTTGACCACGG Smed_3592 21750 - 20581 - | mandelate racemase/muconate lactonizing protein TERM 18 21647 - 21678 + g 85 -15 -3.55071 | TTGCGGACCAGGTAG CCGCGCCCGTTCGG CTCC TCGCCCGGGCGCGG TTTGCCGAGATATGG Smed_3593 22709 - 21747 - | dihydrodipicolinate synthetase TERM 19 22325 - 22315 - G 93 -8.2 -5.04733 | opp_overlap 22314, overlap 22317 GAAGCAGAAAGAAAA GCGG CCA CCGC GTCTGCTCCTGCCCC Smed_3594 22728 - 23702 + | 2-keto-3-deoxy-galactonokinase TERM 20 23745 - 23706 - g 100 -19.4 -4.34402 | gap 1, overlap 23707 GCCGCGACATGAAAA GCGGCGATCTCC-CGACCG AAC CGGTCACGGAGATCGCCGT ATGGACCTCCGGCAG TERM 21 23744 - 23707 - g 100 -22.9 -3.2032 | gap 1, overlap 23706 CCGCGACATGAAAAG CGGCGATCTCC-CGACCG AAC CGGTCACGGAGATCGCCG TATGGACCTCCGGCA Smed_3595 23699 - 23884 + | hypothetical protein Smed_3597 24987 - 24208 - | short chain dehydrogenase Smed_3598 26170 - 25022 - | mandelate racemase/muconate lactonizing protein TERM 22 26088 - 26106 + g 74 -10.3 -3.76373 | ACGGGCTCTCCCCAC CCGACGA CGCCC TCGTCGG TTTCGATCTTGAGAA Smed_3599 26983 - 26228 - | GntR domain-containing protein TERM 23 27362 - 27352 - g 76 -6.8 -4.43477 | GGCAGCCAAGGAAAA GGGT TTC ACCC TCGTCAAGATCGGCG Smed_3600 27191 - 28174 + | monosaccharide-transporting ATPase TERM 24 28222 - 28194 - f 86 -12.4 -4.03234 | gap 1, opp_overlap 28196, overlap 28197 CTGCCCCGACAGAAA TGA-GCCCGGCGG CCAA CCGCCGGGCATCC TTCCGGAGCGTTGCG TERM 25 28196 - 28219 + F 83 -15.2 -2.71263 | opp_overlap 28194 28197 GCCCCGACAGAAATG AGCCCGGCGG CCAA CCGCCGGGCA TCCTTCCGGAGCGTT TERM 26 28218 - 28197 - f 100 -18.7 -3.06418 | opp_overlap 28196, overlap 28194 CCCCGACAGAAATGA GCCCGGCGG CCAA CCGCCGGGC ATCCTTCCGGAGCGT TERM 27 29072 - 29086 + G 76 -5.6 -4.60487 | overlap 29064 29074 TTTACCGCGCGCAGC GGCGAG ATT CTCGGC TTTTTCGGGCTGATC araG 28238 - 29764 + | L-arabinose transporter ATP-binding protein TERM 28 29807 - 29788 - g 78 -2.8 -5.00884 | gap 1, overlap 29789 29790 ACGTCCTTGAAAAAA CTCCTTCTC GGC GAGCAGG-G CCTGGTGGTTATTTT TERM 29 30248 - 30273 + G 81 -2.4 -5.15167 | CGAAATTTCTGTCCG TGCCCACGCC GATCTG GGTGATGGCA TTTTTCTTCGTCGTA araH 29767 - 30720 + | L-arabinose transporter permease protein TERM 30 30787 - 30810 + F 93 -13.9 -3.91897 | opp_overlap 30784 30783 30787 CGGCAAAACAATCCA GCCAGCCCA ACTTCC TGGGCTGGC TTTGTGCATGCCGCG TERM 31 30810 - 30787 - f 80 -14.6 -2.75865 | opp_overlap 30787, overlap 30784 30783 CGGCAAAACAATCCA GCCAGCCCAA CTTC CTGGGCTGGC TTTGTGCATGCCGCG Smed_3603 31108 - 32136 + | putative ABC transporter periplasmic sugar-binding protein Smed_3604 32198 - 33739 + | ABC transporter related TERM 32 34232 - 34274 + G 93 -7.7 -5.0538 | overlap 34233 34234 CACGCCGCTGTCGCT CTTCACCTTG-CCGCCCGCCT TCA AGGCGGTCGGCCAAGG-GACC TTTTTTGGCGTACCC TERM 33 34233 - 34273 + G 73 -11.2 -3.62746 | overlap 34232 34234 ACGCCGCTGTCGCTC TTCACCTTG-CCGCCCGCCT TCA AGGCGGTCGGCCAAGG-GAC CTTTTTTGGCGTACC TERM 34 34234 - 34272 + G 75 -14.7 -2.77166 | overlap 34233 34232 CGCCGCTGTCGCTCT TCACCTTG-CCGCCCGCCT TCA AGGCGGTCGGCCAAGG-GA CCTTTTTTGGCGTAC Smed_3605 33759 - 34751 + | monosaccharide-transporting ATPase Smed_3606 34753 - 35757 + | DeoR family transcriptional regulator Smed_3607 35754 - 36749 + | aldo/keto reductase Smed_3608 36806 - 38494 + | FAD dependent oxidoreductase Smed_3609 38561 - 39403 + | deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase TERM 35 40117 - 40151 + G 81 -9.9 -4.12902 | gap 1 TGCCGCGGCCGAGAC GGGC-CTGGCCGCCGG GACA CCGGTGGTCGGCGGCC TTTTCGACGTGGTTG Smed_3610 39434 - 40963 + | carbohydrate kinase FGGY TERM 36 42561 - 42538 - g 95 -11 -4.58663 | ATGATTGCGGAAAAA GCGGCGGA TGCCATTC TCCGCCGC TAGACCACGATTTCG Smed_3611 40960 - 42564 + | glucose-methanol-choline oxidoreductase TERM 37 43133 - 43158 + F 82 -6.1 -4.79352 | gap 1, overlap 43135 43137 43138 CCGCCGCGCTAGGGT TGGCTGCTGGCG ACC CGTCAGC-GTCG TTTTGTTCTCGCTGC Smed_3612 43270 - 46539 + | adenylyl cyclase class-3/4/guanylyl cyclase Smed_3613 47631 - 46975 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 38 47125 - 47104 - G 75 -2.9 -4.90266 | overlap 47105 CCTATCAATTAAAAA TTGGCCC TTAAGCTG GGGCCAC TGCCGCTCCATATCG TERM 39 47525 - 47511 - G 86 -7.1 -5.09204 | ACAGTGCAAGAAAAA GTGGG GTCCT CCCAC GATAGTCGGCCAAGG TERM 40 47589 - 47579 - G 77 -2.4 -5.07652 | overlap 47580 GCGGGTAAAACAAAA TCCG GAG CGGG TTCGCCTGGCGTGAC Smed_3614 48651 - 49637 + | NADH dehydrogenase (quinone) Smed_3615 49637 - 50272 + | NADH-quinone oxidoreductase, chain I TERM 41 50294 - 50273 - f 71 -12.9 -2.67981 | overlap 50269 50270 ATTCGACGAAAGTGA CGGCGCGCC CGGC GTCGCGCCG GAGCAGGACTGGAGG Smed_3616 50315 - 50755 + | signal-transduction protein Smed_3617 53391 - 50839 - | molybdopterin oxidoreductase TERM 42 51445 - 51419 - G 70 -7.2 -4.07568 | opp_overlap 51438 CTCCGGGCGTCAAAA GGCGGCTCGC GGAATTT GCGAAGCGCC TGGATACGGCCTTCA Smed_3618 54685 - 53420 - | NADH-quinone oxidoreductase, F subunit Smed_3619 55198 - 54689 - | NADH-quinone oxidoreductase, E subunit TERM 43 55051 - 55073 + g 78 -14.8 -3.01712 | opp_overlap 55046 55045 AGACCCAAACGCGTT CGACGCCGAG GAT CTCGGCGACG TCTTCGAGCACCGGG Smed_3620 56431 - 55217 - | NADH dehydrogenase I, D subunit Smed_3621 56997 - 56449 - | NADH (or F420H2) dehydrogenase, subunit C Smed_3622 57497 - 56994 - | NADH-quinone oxidoreductase, B subunit Smed_3623 57850 - 57485 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 44 57924 - 57909 - R 75 -11.8 -3.21099 | CTTTGCGACCAGGAA GCCGGC GCTC GCCGGC GGACCCTGGCAATCC Smed_3624 59502 - 58063 - | proton-translocating NADH-quinone oxidoreductase, chain N TERM 45 58310 - 58292 - G 79 -8.1 -4.38712 | overlap 58293 GCTAGCGCGACAAAA CCGCGCT CGACC AGCGCGA CCAGCACATAGAACT TERM 46 58445 - 58418 - G 70 -9.8 -3.55622 | TGGAACTTGGCGAAA CCTGCGTAGTCA TCGA TGACTTCGCCGG AAAAATCTCCGTTCC Smed_3625 60974 - 59499 - | proton-translocating NADH-quinone oxidoreductase, chain M Smed_3626 62742 - 60982 - | putative monovalent cation/H+ antiporter subunit D TERM 47 61787 - 61758 - G 76 -12.9 -3.53444 | gap 1 GCATTGCCTTGTAAA GCCCGC-CAAGCTC GGA GAGCTTGCGCCGGC CGGTGACATAGATCA Smed_3627 62989 - 62735 - | hypothetical protein Smed_3628 64449 - 62986 - | putative monovalent cation/H+ antiporter subunit D TERM 48 64138 - 64108 - G 72 -3.9 -4.64598 | gap 1 GAAGCAGGCGAAAAA GCGG-GTCTGCGCG TGCT CGTGCAAATGCCGC ATATAACCGATGGAA Smed_3629 64756 - 64454 - | NADH-ubiquinone oxidoreductase chain 4L Smed_3630 65256 - 64756 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TERM 49 65551 - 65572 + r 75 -9.4 -3.82117 | opp_overlap 65548 65546, overlap 65561 GTATGAAAGACATGT GACTCGGC CACAGA GCCGGGTC TGTTTTCTGGATGAG Smed_3631 65833 - 65645 - | hypothetical protein TERM 50 66029 - 66053 + r 93 -12.8 -4.25104 | opp_overlap 66019 AAGGACGCGAACTTC TGCGACCGCC TAGCC GGCGGGCGCA TTTTCATGAGACCAA TERM 51 66754 - 66738 - R 75 -3.6 -4.73864 | overlap 66739 TTAAGTAAGAGAAAA CGTCCG TCGCG CCGACG TGCATCAGAATACCT Smed_3633 67826 - 67110 - | L-fuculose-phosphate aldolase Smed_3634 69287 - 67839 - | carbohydrate kinase FGGY Smed_3635 70182 - 69334 - | xylose isomerase domain-containing protein TERM 52 69598 - 69624 + g 73 -3 -4.76644 | gap 1, overlap 69593 TTTCAGATGTTCGCG GGCATCGAGGA TGCCCT TGC-CGATGCC TTTTTCCTCAATGTT Smed_3636 71183 - 70185 - | inner-membrane translocator TERM 53 70920 - 70884 - G 70 -7.2 -3.9712 | gap 1, overlap 70887 TGAGCCGACGAGAAA GATGCCGAA-GCCGGCG TCGA CGCCGCCGTTCGCCTTC AGGACCCAGGCAAGG Smed_3637 72181 - 71180 - | monosaccharide-transporting ATPase TERM 54 71970 - 71913 - G 83 -15.5 -3.12847 | gap 1, opp_overlap 71933, overlap 71967 AAGCCGGAGAGCCAA CCGCCGCCGCCGATCCAACCCAGCGCGA TCG CCGTGCCGTATTGGA-CGACGGAAGCGG CAACTGCAAAGGAGA TERM 55 72103 - 72090 - G 73 -6.7 -4.33417 | CCGAGCGACAAGAAA TTCGC GGTC GCGAA AGACAGTACGGCACT Smed_3638 73700 - 72174 - | ABC transporter related TERM 56 72343 - 72314 - G 79 -10.8 -3.87104 | gap 1 CCGAGATCAGAATAA TCG-CAAGCCCGC TCTCG GCGAGCTTGGCGA CGATGTCGAAGATAC TERM 57 73767 - 73798 + r 74 -11.4 -3.551 | opp_overlap 73761 CGGGAGAACCCGTTG GTGGGGCGGGAACC ACTT GGCCCCCGCCCGAC TTCTGTCCGTTCAGA Smed_3639 74801 - 73809 - | putative ABC transporter periplasmic sugar-binding protein Smed_3640 75040 - 76107 + | regulatory protein LacI Smed_3641 77939 - 76152 - | glutathione synthase TERM 58 77484 - 77470 - G 76 -7.2 -4.35483 | TCGGACGAGAAGAAA TCAGAT CGG ATCTGA ACCATGCCGCAGGCC Smed_3642 79716 - 77941 - | asparagine synthase (glutamine-hydrolyzing) Smed_3643 80618 - 79836 - | GntR domain-containing protein Smed_3644 81422 - 80625 - | ABC transporter related TERM 59 80729 - 80696 - G 72 -4.5 -4.56597 | gap 2, overlap 80698 CCGGGTCGGTAAAAA GGCG-GGCGG-CGGG TGCGGT CTCGACCACCTCGCC GAAATACATCACCGC Smed_3645 83221 - 81422 - | ABC transporter related Smed_3646 84165 - 83218 - | binding-protein-dependent transport systems inner membrane component Smed_3647 85770 - 84241 - | 4-phytase Smed_3648 86336 - 86016 - | hypothetical protein Smed_3649 86646 - 86996 + | membrane protein-like protein Smed_3650 87250 - 88071 + | rhodanese domain-containing protein Smed_3651 88071 - 89480 + | chromate transporter Smed_3652 90518 - 89709 - | short-chain dehydrogenase/reductase SDR TERM 60 90432 - 90457 + g 76 -6.1 -4.62069 | gap 1 TACGACATTGGCGCC GCGCTCGAGGAA GAG TTTCGCG-GCGC TTTTTCCAATCACGC TERM 61 90472 - 90496 + g 75 -4.1 -4.7254 | opp_overlap 90470 CTTTTTCCAATCACG CCGGCCCCG CCGGTAA CGAGGACGG TTTTTCCTGAAAAGT Smed_3653 91407 - 90568 - | NAD-dependent epimerase/dehydratase TERM 62 90787 - 90808 + g 78 -14.4 -2.98823 | opp_overlap 90787 CGCCGCCAGCAGGAA CGCCCGGG CTGCGT CCCGGGCG TCTATGTAGGCCCAG TERM 63 90808 - 90787 - G 80 -14.4 -3.21099 | opp_overlap 90787 CGCCGCCAGCAGGAA CGCCCGGG CTGCGT CCCGGGCG TCTATGTAGGCCCAG TERM 64 92071 - 92057 - g 73 -8.6 -3.97947 | CTGACTCAGGAGAAA GTCGAA GGC TTCGAC AGTTCGTCGGAAGTG Smed_3654 91607 - 92611 + | basic membrane lipoprotein Smed_3655 92760 - 94289 + | ABC transporter related Smed_3656 94286 - 95383 + | inner-membrane translocator Smed_3657 95371 - 96318 + | inner-membrane translocator Smed_3658 96333 - 97337 + | inosine/uridine-preferring nucleoside hydrolase Smed_3659 97334 - 98275 + | inosine/uridine-preferring nucleoside hydrolase Smed_3660 98320 - 98961 + | isochorismatase hydrolase Smed_3661 98966 - 99484 + | MarR family transcriptional regulator Smed_3662 99529 - 100113 + | hypothetical protein Smed_3663 102109 - 100349 - | 5-oxoprolinase (ATP-hydrolyzing) Smed_3664 104181 - 102106 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 65 102882 - 102893 + g 74 -5.8 -4.4261 | opp_overlap 102873 102874 TCGAAACCATGCGGA TGGC ACCG GCCA TTTTCATGTTCGCGA TERM 66 104229 - 104248 + r 70 -4.4 -4.41047 | opp_overlap 104229 104220 GACAATCACTGATAA TTAATTTG TACA CGAATTAA TTTTCATTGCAAGAT Smed_3665 105604 - 104426 - | peptidase M42 family protein TERM 67 105067 - 105089 + g 71 -13.4 -2.52896 | opp_overlap 105079 ACTCGGGCTGGGGAT CGATGGCGAC AAT GTCGCCAACG TCAATTCCGAGCTGC TERM 68 106062 - 106081 + G 75 -12.1 -3.63569 | opp_overlap 106061 106060 AGCGATGGACGAATT CGCCGGC GAGCTG GCCGGCG TTCTTGAGAAATTCC Smed_3666 105757 - 106824 + | hypothetical protein TERM 69 107185 - 107169 - g 71 -5.8 -4.2558 | CATTCCGGACCAAAA GCCTGC GCCGG GCAAGC AAGCCGTCACCAAAA TERM 70 107270 - 107286 + G 76 -7.9 -4.3255 | overlap 107285 CGCCGAGTGGTTTCG GCAGCAC CTC GCGCTGC TTTCTTCGTTAAAGC Smed_3667 106996 - 107298 + | hypothetical protein Smed_3668 107941 - 107432 - | hypothetical protein Smed_3669 108918 - 107941 - | putative cellulase H precursor protein Smed_3670 109529 - 108915 - | hypothetical protein Smed_3671 111390 - 109534 - | putative cellulose synthase protein Smed_3672 112373 - 111387 - | UDP-glucose 4-epimerase TERM 71 112071 - 112095 + g 77 -12.9 -3.60884 | overlap 112074 112077 GCATGCATCGAGGAG CGACAGCGTCC CGC GGACGTTGTTG TTGTAGTATTTTGCC TERM 72 112074 - 112092 + g 79 -11 -3.91801 | overlap 112071 112077 TGCATCGAGGAGCGA CAGCGTCC CGC GGACGTTG TTGTTGTAGTATTTT TERM 73 112077 - 112089 + g 76 -9.1 -4.05607 | overlap 112074 112071 ATCGAGGAGCGACAG CGTCC CGC GGACG TTGTTGTTGTAGTAT Smed_3673 113419 - 112373 - | NAD-dependent epimerase/dehydratase TERM 74 114429 - 114410 - g 73 -3.4 -4.67982 | CGGCATGGAAGAAAA CCTCGGCA ACAT CACCGTGG AAGAAGTGCCGCGCA TERM 75 114466 - 114435 - g 75 -11.6 -3.62775 | opp_overlap 114433 114461, overlap 114436 ATCACCGTGGAAGAA GTGCCGCGCATCGT CCGT ACGATACGCGACAT GGTCGTTACATGCGT TERM 76 114465 - 114436 - g 78 -15.1 -2.77344 | opp_overlap 114433 114461, overlap 114435 TCACCGTGGAAGAAG TGCCGCGCATCGT CCGT ACGATACGCGACA TGGTCGTTACATGCG TERM 77 114609 - 114627 + G 73 -8.8 -3.97406 | ATTTGTCGGGAGCTC GGCGTCTC CAG GACACGCC TTTATCAACTTTTCG Smed_3674 113778 - 114926 + | helix-turn-helix domain-containing protein Smed_3675 115715 - 114969 - | short-chain dehydrogenase/reductase SDR TERM 78 115849 - 115879 + G 78 -3.1 -5.00616 | gap 1, overlap 115849 115850 115851 CCCAGAAGTTTCGAT CGTGC-CGACGCGC TTAT GCGCGCCATGCAGG TTTTTTGGGAGAAGG TERM 79 116383 - 116373 - g 78 -6.8 -4.64657 | overlap 116363 TCAAACGCTGAAAAA CGTC GCG GACG GAGCAATGGCCGCTT Smed_3676 115816 - 116439 + | TetR family transcriptional regulator Smed_3677 116972 - 116553 - | hypothetical protein TERM 80 116861 - 116880 + g 74 -10.6 -3.75738 | overlap 116863 CAGCAGCTCCGCCGG CTGCGCCG GTTA CGGCGCTG TTCTTGGTCGTGCTC TERM 81 116863 - 116878 + g 74 -11.8 -3.45742 | overlap 116861 GCAGCTCCGCCGGCT GCGCCG GTTA CGGCGC TGTTCTTGGTCGTGC TERM 82 116952 - 116964 + g 74 -2.7 -4.86621 | CAGAACAATGGCACC TTTGA TGA TCAGA TTTTTCATTAGGCAT Smed_3678 117527 - 117174 - | hypothetical protein Smed_3679 118084 - 117527 - | hypothetical protein Smed_3680 120449 - 118089 - | stage II sporulation E family protein Smed_3681 121624 - 120446 - | methyltransferase type 11 TERM 83 120694 - 120668 - G 79 -10.9 -3.96327 | overlap 120684 120685 ATTGGTGACCATAAA GGATTCGACGA GAATA TCGTCGAAACC GGCGTCGACAAGGTA TERM 84 121185 - 121197 + g 76 -5.5 -4.56914 | overlap 121183 AGGATGGCACGCTCG TGGCG CCA CGTCA TTTTCGTTTGGGTGC Smed_3682 122139 - 121621 - | hypothetical protein TERM 85 121985 - 121973 - G 73 -3.4 -4.72007 | opp_overlap 121981 121982 GCGGATGAAAAGAAA TTCG AGTGG CGAA CGGGATCCGTACGAT Smed_3683 123904 - 122210 - | diguanylate cyclase/phosphodiesterase TERM 86 124119 - 124096 - R 71 -8 -3.96327 | ATGGCTGATCATAAA TCCCGGGGGC ATAC GCCCCAGCGA CCGATCCACAAGGCG Smed_3684 125348 - 124140 - | mannonate dehydratase Smed_3685 126401 - 125358 - | alcohol dehydrogenase Smed_3686 127822 - 126416 - | TRAP dicarboxylate transporter, DctM subunit Smed_3687 128415 - 127828 - | tripartite ATP-independent periplasmic transporter DctQ Smed_3688 129443 - 128469 - | TRAP dicarboxylate transporter, DctP subunit Smed_3689 130222 - 129479 - | GntR domain-containing protein TERM 87 130430 - 130407 - R 81 -11 -3.81958 | overlap 130405 ACCCGTAAACAAAGA TGCCCGGC ACTGAATG GCCGGGCA GTTGGCAGGGAATTG Smed_3690 131802 - 130528 - | major facilitator transporter TERM 88 131367 - 131324 - G 90 -13.8 -4.02108 | overlap 131335 GCGACGAGAACGAAA GGCGCCAGGAATTTCGTCAC TGCC GCGCCGACATTGCCGGCGCC GAAGATGCCGAGCGC TERM 89 132003 - 131980 - H 72 -9.5 -3.78597 | AGTTATGAATGCAAA CGGCGTGCC AGTCCG GGCACTCCG GATAATCGCCCGTGA Smed_3691 132330 - 133301 + | transposase IS116/IS110/IS902 family protein Smed_3692 134396 - 133392 - | ectoine utilization protein EutE Smed_3693 135582 - 134401 - | ectoine utilization protein EutD Smed_3694 136617 - 135628 - | ornithine cyclodeaminase TERM 90 136491 - 136509 + g 71 -5.8 -4.36914 | overlap 136492 TGTCGAGCCTCAGGA TCGGCGGC ATC GCCACCGC TTTTGTGGCAAGCGC Smed_3695 137618 - 136614 - | threonine dehydratase Smed_3696 138400 - 137615 - | ectoine utilization protein EutA Smed_3697 139062 - 138400 - | ectoine/hydroxyectoine ABC transporter permease protein EhuD Smed_3698 139784 - 139065 - | ectoine/hydroxyectoine ABC transporter permease protein EhuC Smed_3699 140679 - 139828 - | ectoine/hydroxyectoine ABC transporter solute-binding protein TERM 91 140395 - 140364 - G 71 -5.7 -4.25104 | CCGGCTTCATGAAAA GGCCGGCGGTGAT CGCGTC ATGGCGGCCGGCC TGCAAGCCCGGGATC Smed_3700 141523 - 140738 - | ectoine/hydroxyectoine ABC transporter ATP-binding protein TERM 92 141154 - 141164 + g 71 -8.2 -3.87815 | TCTGCGCATCAGCGC GGGC CAT GCCC TTTGTCAGCATCGGC TERM 93 141281 - 141302 + g 73 -10.9 -3.66018 | gap 1 GAGGTGCCGCTCGTC GGCG-GGAAC GAG GTTCCCCGCC TTCTTCACATGATAG Smed_3701 143120 - 141684 - | GntR family transcriptional regulator Smed_3702 143174 - 143827 + | AsnC family transcriptional regulator Smed_3703 143824 - 145320 + | aldehyde dehydrogenase Smed_3704 145403 - 146779 + | hypothetical protein Smed_3705 146791 - 147864 + | alcohol dehydrogenase Smed_3706 148548 - 147916 - | glutathione S-transferase domain-containing protein Smed_3707 149722 - 148673 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 94 149672 - 149656 - G 90 -15.1 -3.76839 | opp_overlap 149641 CAATCGCAAGCGAAA CGCCGCG GAT CGCGGCG ATGTCGCCCTGATAG Smed_3708 150570 - 149722 - | binding-protein-dependent transport systems inner membrane component Smed_3709 151460 - 150579 - | binding-protein-dependent transport systems inner membrane component TERM 95 151529 - 151571 + r 83 -14.1 -3.10409 | gap 1, opp_overlap 151535 151555, overlap 151523 151547 CAGGGTGGCATGACC GCAGAATGCCGCTCGCCATC GCAA GAGGGCGCGCGGCAC-CTGC TTCGATCAATTGCTG TERM 96 151566 - 151535 - R 89 -15.8 -3.34043 | opp_overlap 151529 151523 151547, overlap 151555 GGCATGACCGCAGAA TGCCGCTCGCCATC GCAA GAGGGCGCGCGGCA CCTGCTTCGATCAAT Smed_3710 152872 - 151577 - | extracellular solute-binding protein TERM 97 153097 - 153061 - H 77 -10.1 -3.90112 | opp_overlap 153056, overlap 153063 CCCCGCCGAACCAAA TAGGGTAAGGCTGCCGA TTG TCGAGAGCCCTTCCCCA AATGGTCTTAAGACT TERM 98 153095 - 153063 - H 71 -10.5 -3.54146 | opp_overlap 153056, overlap 153061 CCGCCGAACCAAATA GGGTAAGGCTGCCGA TTG TCGAGAGCCCTTCCC CAAATGGTCTTAAGA TERM 99 153504 - 153520 + G 78 -10.1 -4.08767 | GGAAGCGGTCCACGC GCGAGGT CCT GCCTCGC TTTTCAGGGCATGCG TERM 100 153688 - 153715 + G 79 -9 -4.10657 | gap 1, overlap 153688 CCCTCCGTCGTGCTC G-GCCCCGGCGCC TAC GGCGCCAGCGCGC TTTTCCGGGGTCTCG TERM 101 154324 - 154270 - g 75 -14.1 -3.06796 | gap 1, opp_overlap 154269 GTTGATCTGATGGAA CGGGGAG-GCGCCGGCGTTCTCGCCG GACC CAGCGTGATCGCCGGGGCGCTCGCGG ATATCCTCATCGGCA Smed_3711 153238 - 154527 + | NAD-dependent epimerase/dehydratase Smed_3712 154527 - 155000 + | hypothetical protein Smed_3713 156074 - 155064 - | substrate-binding region of ABC-type glycine betaine transport system TERM 102 156088 - 156065 - G 93 -13.8 -4.13711 | opp_overlap 156063, overlap 156056 156079 TCAAAAGACCAGAAA GGCGGCTCAC CAAA GTGCGCCGCC CGTGATCTGTATGTT Smed_3714 156901 - 156071 - | short-chain dehydrogenase/reductase SDR TERM 103 156820 - 156788 - G 80 -14.7 -3.14132 | overlap 156791 CGCTTCGCGGACGAA GGAGCCGACGGCGAC ATT GGCGCCGTCGGCAGC AAACGCCTCCGCGAT TERM 104 156817 - 156791 - G 87 -19.4 -2.77899 | overlap 156788 TTCGCGGACGAAGGA GCCGACGGCGAC ATT GGCGCCGTCGGC AGCAAACGCCTCCGC Smed_3715 157395 - 156898 - | acetone carboxylase gamma subunit Smed_3716 159591 - 157399 - | hydantoinase B/oxoprolinase TERM 105 157689 - 157711 + g 72 -7.6 -4.11216 | CGAACACCTTCTCGG CGGCTTCGCG CGT CAGGAAGCCG TTTTCCACGTCCCAC TERM 106 158996 - 159010 + g 72 -7.8 -4.14013 | overlap 158996 159005 CGGATCACGTAGTCG CGGCGA ATC TCGTCG TTTTCGCCGATTTTC Smed_3717 161738 - 159609 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 107 161594 - 161625 + g 86 -7.3 -4.7173 | gap 1, opp_overlap 161575 161610, overlap 161596 161598 AGGCGTCCGCGGCAT CGGCGGCGGAGG AAATGAAGC CCTCCGCC-TCG TTTTTCGGTGTGGTG Smed_3718 161836 - 162630 + | response regulator receiver protein Smed_3719 162732 - 162905 + | hypothetical protein Smed_3720 163951 - 163022 - | transposase IS116/IS110/IS902 family protein Smed_3721 164204 - 164467 + | hypothetical protein Smed_3722 165064 - 164489 - | hypothetical protein Smed_3723 165705 - 165169 - | metallophosphoesterase Smed_3724 167033 - 165777 - | ribulose-bisphosphate carboxylase Smed_3725 167170 - 167883 + | transcriptional regulator NanR Smed_3726 169948 - 167954 - | cellulose synthase (UDP-forming) Smed_3727 171162 - 169930 - | hypothetical protein TERM 108 170779 - 170760 - G 72 -12.2 -3.28712 | CCCTTTTCTGCAGAA TCTGGAGC TCAC GCTCCAGA CTGGCGATGGTCGCG TERM 109 171474 - 171464 - H 74 -6.8 -4.30719 | opp_overlap 171466 171467, overlap 171466 171467 CCGTCGTAGAAGAAA GACG GGG CGTC TGAGCCGCCCCCTTT TERM 110 172281 - 172297 + G 100 -9.4 -5.07486 | TCCGGTTCGCATGGG CGGCGA CGAAT TCGCCG TTTTTGTTCCAAATC Smed_3728 171511 - 172536 + | diguanylate cyclase Smed_3729 172560 - 173549 + | alcohol dehydrogenase Smed_3730 173839 - 174558 + | regulatory protein IclR TERM 111 174990 - 175015 + G 72 -4.5 -4.56597 | overlap 174992 CCGGAACGCTGATCT GGTGCCGCTCC AACC GCAGCGGCCGC TTTTTCGAAGGCGCG Smed_3731 174560 - 176296 + | hypothetical protein Smed_3732 176293 - 177021 + | hypothetical protein Smed_3733 177034 - 178005 + | membrane dipeptidase TERM 112 178062 - 178041 - f 72 -9.4 -3.66055 | gap 1, overlap 178039 CAAAGAACAAGAAGA GCCGC-CGC TATAG GCGAGCGGC CGCGGGAATAGCAGT Smed_3734 178111 - 179184 + | putative ABC transporter periplasmic solute-binding protein TERM 113 179294 - 179282 - f 72 -4.8 -4.56597 | CTTTCGCGGCAAAAA CCCT GTCCG AGGG TAAAGGAGCAATGTC TERM 114 180105 - 180119 + G 81 -7.1 -4.70659 | ACGCTCGCGGTATAT GCGGT CTACA ACCGC TTTTTCGGTCTCGAC Smed_3735 179310 - 180161 + | binding-protein-dependent transport systems inner membrane component TERM 115 180749 - 180766 + G 100 -12.7 -4.41348 | ATCGCATCCTTCGAT GAGGCCG TCAT CGGCCTC TTTATTTCCGGCCGC Smed_3736 180158 - 180988 + | binding-protein-dependent transport systems inner membrane component TERM 116 181418 - 181397 - g 72 -4.3 -4.57073 | gap 1, overlap 181399 CAGGGTTTCGAAAAA CGG-GTGCCC TCC GAGCTCTCCG GCGGTCAGCAGCAGC Smed_3737 181004 - 182053 + | ABC transporter related Smed_3738 182084 - 183469 + | aminotransferase Smed_3739 183480 - 184943 + | aldehyde dehydrogenase Smed_3740 184977 - 185360 + | endoribonuclease L-PSP Smed_3741 185404 - 185784 + | endoribonuclease L-PSP Smed_3742 186060 - 186869 + | GntR domain-containing protein Smed_3743 186893 - 187885 + | TRAP dicarboxylate transporter, DctP subunit Smed_3744 187964 - 188431 + | tripartite ATP-independent periplasmic transporter DctQ Smed_3745 188444 - 189721 + | TRAP dicarboxylate transporter, DctM subunit Smed_3746 189745 - 190191 + | ribose-5-phosphate isomerase B Smed_3747 190907 - 190227 - | ABC transporter related Smed_3748 192154 - 190904 - | hypothetical protein Smed_3749 193173 - 192151 - | RND family efflux transporter MFP subunit TERM 117 193125 - 193103 - G 86 -7.6 -4.80882 | overlap 193105 AGGGCATACCAAAAA GCCGCGGC ACCGACA GCGGCGGC TGCAGCAACAGCCAC TERM 118 193513 - 193535 + G 83 -12 -4.09685 | opp_overlap 193515 GCGCATGGCGCACCA GAGCCTGAAG GAA CTGCAGGCTC TTTTCGAGGATCCCA Smed_3750 193310 - 194002 + | TetR family transcriptional regulator TERM 119 194223 - 194241 + T 76 -13.8 -2.70932 | CCTTCGCAGCTCGAT GCCTCGGC CAA GCCGGGGC TCGTTCAAAAAAAGG TERM 120 194280 - 194255 - T 100 -17.6 -5.40072 | opp_overlap 194253 194252 GCTCGTTCAAAAAAA GGCCCTGGCC TGTGCC GGCCAGGGCC CCATTCATTTCCCAC Smed_3751 195527 - 194520 - | periplasmic binding protein/LacI transcriptional regulator TERM 121 194997 - 194974 - G 79 -9.4 -4.14392 | overlap 194975 TGCGAATTCGCAAAA GCGAGCCGCC GGCA GCCGGCACGC ACGAAAGCGGTGACG TERM 122 195731 - 195756 + G 93 -8.9 -5.1615 | gap 1, opp_overlap 195724 195725, overlap 195727 TGGTTAAACTGGCCG CGGCAGCGCTCG CCG CGGGCGC-GACG TTTTTTGCCTATTCG TERM 123 196105 - 196053 - g 81 -16.4 -2.71011 | gap 2, opp_overlap 196062 ATGGGCGGTGAAGCA GGCCGAGAGCGCCGGC-TAT-CGC ACGGTCG GCGTATATGCCGGCGCACTCGGCT GGGGATACAACACCG TERM 124 196516 - 196500 - g 78 -2.9 -5.03145 | overlap 196501 CAAGGGCGCAAAAAA CCTCGAC AAT GCCAAGA AATGGTATGACTGGG Smed_3752 195709 - 196737 + | extracellular solute-binding protein TERM 125 197043 - 197060 + G 71 -8.3 -3.93369 | overlap 197044 CGGCTTCCCCGTCGA ACCGGCG GTCG CGCCGGG TTTCCTTCAGATTGC TERM 126 197305 - 197337 + G 72 -2.5 -4.68655 | overlap 197298 197307 CAGCCCCCGATGGGC GCCGGAGCCGTGC TTGCCGC GCTCGTCTTCGTC TTTATTTTCGCCTTC Smed_3753 196915 - 199143 + | binding-protein-dependent transport systems inner membrane component Smed_3754 199140 - 200201 + | ABC transporter related TERM 127 201016 - 200989 - g 76 -14.1 -3.15579 | CGAAGGGCTGACCAA GGGTGCAGCGG TGCTTG CCGCGGCACCC GGCGCAGTCGAGGAC Smed_3755 200255 - 201055 + | inositol-phosphate phosphatase TERM 128 201150 - 201117 - f 78 -14.7 -2.62184 | CGCTCGCGCAGAGCA GGACGAGGAAAAGCG TGCG CGGTTTTCCTCATCC CGCTCCAGGTCGAGC Smed_3756 201391 - 201615 + | hypothetical protein Smed_3757 201637 - 201837 + | hypothetical protein TERM 129 201988 - 201974 - f 70 -4.3 -4.60041 | ATGGACGCGCAAAAA TTGAG TAGCC CTCAA TCATGAAAGGACCGT Smed_3758 202007 - 202906 + | short-chain dehydrogenase/reductase SDR TERM 130 203457 - 203469 + G 83 -4.8 -4.96848 | overlap 203456 CGTCGTAACGGGTTT CGTC TACAC GACG TTTTTCTATCACCGG Smed_3759 202969 - 203766 + | Ion transport 2 domain-containing protein Smed_3760 204595 - 203807 - | hypothetical protein TERM 131 204572 - 204530 - G 72 -2.5 -4.78107 | gap 1, overlap 204531 204532 GAGCATCACGAAAAA GGCGCCG-CGCATCAGCACA CCGT CGTCCAGCCGCATCAGCGCC TTGAAAGCGTCATCG Smed_3761 205883 - 204582 - | hypothetical protein TERM 132 204938 - 204917 - G 78 -12.3 -3.72576 | overlap 204927 CCTCGGCGGATGAAA GCGGAACGA AGCG TCGCTCCGC CACCGGCATCCGACC Smed_3762 207569 - 206007 - | putative adenylate/guanylate cyclase Smed_3763 207942 - 207577 - | response regulator receiver protein Smed_3764 210721 - 207968 - | multi-sensor hybrid histidine kinase TERM 133 210655 - 210666 + g 71 -5.8 -4.25104 | overlap 210635 GCAGATCGATGATCC GGCT GTCG AGCC TTTTCGTGGGCCGAA Smed_3765 211476 - 210718 - | hypothetical protein TERM 134 211269 - 211240 - G 70 -7.8 -4.07687 | opp_overlap 211229 211220 ACGCTCGCCGTAAAA GGCGATCGCTTC GGTTGT GAACCGCTCGCC GTTAAGCTTCTTGTC Smed_3766 212599 - 211541 - | oxidoreductase domain-containing protein Smed_3767 213668 - 212604 - | monosaccharide-transporting ATPase TERM 135 213118 - 213095 - G 78 -11.6 -3.71873 | GGATCCAGATCGAAA CCGGCAGGCC GAGC AGCCGGCCGG AGCCGAGGAAGGCAA Smed_3768 215212 - 213668 - | ABC transporter related Smed_3769 215859 - 215215 - | hypothetical protein TERM 136 215757 - 215743 - G 71 -12.8 -3.05384 | opp_overlap 215739 215740 215752 GCGGTTGGGATTGAA GCCGCC GGA GGCGGC TTCCGCAGCCTCTTC TERM 137 215913 - 215882 - R 81 -15.2 -2.66634 | opp_overlap 215882 215900, overlap 215884 CACTCCATCACAGGA CAGGCACGCAGC TTGGTTCT GCCGCGTGCCTG AGCGGGCGGCGCGGA TERM 138 215911 - 215884 - R 71 -12 -2.87468 | opp_overlap 215882 215900, overlap 215882 CTCCATCACAGGACA GGCACGCAGC TTGGTTCT GCCGCGTGCC TGAGCGGGCGGCGCG Smed_3770 216910 - 215969 - | periplasmic binding protein/LacI transcriptional regulator TERM 139 216939 - 216961 + r 85 -10.5 -4.27316 | opp_overlap 216938 216937 CAGGTTGAAAAATGC CGGAGCCAG CCTCA CAGGCTCCG TTTTCCGTTCGCGCA Smed_3771 217802 - 216978 - | NADP oxidoreductase coenzyme F420-dependent Smed_3772 217969 - 218574 + | TetR family transcriptional regulator Smed_3773 218670 - 219824 + | RND family efflux transporter MFP subunit TERM 140 222949 - 222916 - g 74 -9.3 -3.83214 | overlap 222926 GGAAAGGAACCGAAA GCGCGCAAGACGGCC CCGG GGCCGGCGGCCGCGC AAGGAGATGCCGACG Smed_3774 219853 - 223005 + | acriflavin resistance protein Smed_3775 223134 - 224090 + | AraC-like transcriptional regulator Smed_3776 224382 - 224840 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Smed_3777 224842 - 227052 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 141 227075 - 227106 + T 90 -16.6 -3.34895 | overlap 227076 227078 TCCTCCCCATCGCAT ACGCCCGGAACTCG ACCT CGAGTTCCGGGTGG TTCCTTGGGGATGCG TERM 142 227076 - 227105 + T 100 -20.1 -2.60723 | overlap 227075 227078 CCTCCCCATCGCATA CGCCCGGAACTCG ACCT CGAGTTCCGGGTG GTTCCTTGGGGATGC TERM 143 227078 - 227103 + T 100 -19.1 -2.84276 | overlap 227076 227075 TCCCCATCGCATACG CCCGGAACTCG ACCT CGAGTTCCGGG TGGTTCCTTGGGGAT Smed_3778 227779 - 227606 - | hypothetical protein Smed_3779 228009 - 227812 - | hypothetical protein TERM 144 227895 - 227917 + g 71 -8.4 -3.88498 | gap 1, opp_overlap 227880, overlap 227867 CCTTGCTGCGCGTGC GCCGCTCGG AATCGG CCG-GCGGC TTTGGTATCTCCAGC Smed_3780 228199 - 228020 - | hypothetical protein Smed_3781 228740 - 228249 - | hypothetical protein TERM 145 228760 - 228790 + r 72 -9.5 -3.68725 | opp_overlap 228778, overlap 228759 228768 CTCTCCCTTGGCGGC GACCGGCCGACGG ATGAA CCGGCGGCCAGCC TGTTTGTTCCGACTT Smed_3782 230046 - 228829 - | major facilitator transporter TERM 146 229844 - 229812 - G 71 -11.4 -3.50853 | gap 2, opp_overlap 229814, overlap 229777 229813 TCGTCGGAACGACAA CGGCCGTCTGGCCGAC GCG GTCGACCAGAC-GC-G ATATCTGCGGGGCGA TERM 147 230070 - 230099 + H 79 -13.1 -3.3782 | gap 1, opp_overlap 230068 230079 230081, overlap 230072 230081 CCTTAAAAAGGGATG CT-GATGACATACG CGG CGTATGTCATCTAG TTAGTTGCATACGTC TERM 148 230072 - 230096 + H 86 -15.9 -2.8507 | opp_overlap 230068 230079 230081, overlap 230070 230081 TTAAAAAGGGATGCT GATGACATACG CGG CGTATGTCATC TAGTTAGTTGCATAC TERM 149 230119 - 230079 - H 70 -12 -2.79183 | gap 1, opp_overlap 230072 230070 230081, overlap 230068 230081 GGGATGCTGATGACA TACGCGGCGTATGTCATCT AGTT AGTTG-CATACGTCGCGTA TGTCAAATAAAATAC TERM 150 230081 - 230117 + H 71 -12.4 -2.89683 | gap 1, opp_overlap 230068 230079 230081, overlap 230072 230070 GATGCTGATGACATA CGCGGCGTATGTCATCT AGTT AGTTG-CATACGTCGCG TATGTCAAATAAAAT TERM 151 230142 - 230132 - H 83 -5.4 -4.88918 | GTATGTCAAATAAAA TACG GAG CGTA TGTGAATAGGAGACG TERM 152 230343 - 230327 - g 74 -2.1 -4.82901 | overlap 230328 CTTCGGTGACAAAAA GGGTCTG CTG CAGGCCG TCATAAGGGAGATCG Smed_3783 230160 - 230753 + | TetR family transcriptional regulator Smed_3784 231637 - 230840 - | hypothetical protein Smed_3785 233016 - 231748 - | protein of unknown function DUF900 hydrolase family protein Smed_3786 235013 - 233292 - | outer membrane autotransporter TERM 153 233362 - 233385 + g 81 -7.4 -4.4078 | gap 1, opp_overlap 233362 CCGAGGCTTAGATAA CCTCCCG-TCG CTT CGATCTGGAGG TTTTCGTTGAGCAGC TERM 154 233437 - 233427 - G 76 -8.2 -4.1899 | CGAGCGCAGTGAAAA CGCC CAG GGCG AGGGAGAGACTTCCG Smed_3787 235990 - 235031 - | hypothetical protein Smed_3788 237210 - 236230 - | hypothetical protein TERM 155 236732 - 236753 + g 70 -12.3 -3.17146 | overlap 236730 236728 GTGGCAAGCTCATTA TCGCCGACC CGGC GGTTGGCGA TCTCTTCTAGGCCGA Smed_3789 238608 - 237229 - | hypothetical protein Smed_3790 239635 - 238766 - | hypothetical protein TERM 156 239982 - 239967 - g 84 -2.4 -5.27477 | overlap 239974 ATCCCAATGAAAAAA GAACCG ATTG CGGACC AGCGTGATCCACGCG Smed_3791 239958 - 241604 + | sulfatase TERM 157 241626 - 241655 + F 100 -19.3 -4.4009 | opp_overlap 241642 TAGCTCTGAATGGTG TGGGGCCGGCGCC AAAT GGTGTCGGCCCCA TTTTCTGGGGTGACG Smed_3792 241865 - 242869 + | nonspecific acid phosphatase precursor Smed_3793 243394 - 242993 - | response regulator receiver protein Smed_3794 244068 - 243421 - | response regulator receiver protein TERM 158 244015 - 243996 - G 70 -10 -3.66356 | ATCCCGAAGCCGAAA GCAGTCTC TTCA GAGACCGC AGCACGAGCTCGTCA Smed_3795 245910 - 244078 - | histidine kinase TERM 159 247048 - 247061 + G 81 -4.5 -5.0538 | overlap 247047 247046 ATGACCGCCTGGCTG GCGAT CGTC GTCGC TTTTTTCGCCTACCC TERM 160 247135 - 247119 - g 75 -3.5 -4.86731 | CCGCCTGAAAGAAAA CGGGCTG GCC CTGCTCG GAGCGCAGGCGACGC Smed_3796 246187 - 247404 + | putative transmembrane protein Smed_3797 247552 - 248292 + | YidE/YbjL domain-containing protein Smed_3798 248423 - 249394 + | ATPase Smed_3799 249410 - 250405 + | hypothetical protein Smed_3800 250406 - 250927 + | hypothetical protein TERM 161 251797 - 251779 - g 72 -4.5 -4.5442 | gap 1, opp_overlap 251791 CGGCGAACCAGAAAA CGCTGAGC TGGC GCCC-GCG CATCGAGCTGTTCCA Smed_3801 250914 - 251918 + | von Willebrand factor type A TERM 162 252470 - 252499 + G 72 -4.1 -4.56597 | gap 1, overlap 252472 GCCGAGGCAGCTCTT GCGGA-CGAGCCGG CGC CAGGCACGATCCTC TTTTTGACCGACGGG Smed_3802 251915 - 253483 + | TPR repeat-containing protein TERM 163 254496 - 254507 + G 78 -3.6 -5.00884 | overlap 254491 CTCGAGAGAGCGGCA GTCG GAGC CGGC TTTTTTCCGGCAAGT Smed_3803 253480 - 254823 + | hypothetical protein TERM 164 256242 - 256257 + T 76 -7.5 -4.50976 | opp_overlap 256218 GGCAAAACGGCCACT CCCGC CCTTCA GCGGG TTTTCTGGTGTGCCC TERM 165 257031 - 257006 - T 83 -15.5 -2.72036 | opp_overlap 257010 257030, overlap 257010 CAAATGCACAGATCA GAAAGGCGGGA CTTC CCCCGCCTTTC GTCAGAACGATATCT TERM 166 257010 - 257027 + T 72 -9.8 -3.72695 | opp_overlap 257006 257010 TGCACAGATCAGAAA GGCGGG ACTTCC CCCGCC TTTCGTCAGAACGAT TERM 167 257027 - 257010 - T 80 -10.5 -4.04318 | opp_overlap 257010, overlap 257006 TGCACAGATCAGAAA GGCGGGA CTTC CCCCGCC TTTCGTCAGAACGAT Smed_3805 258742 - 257084 - | sulfatase TERM 168 257785 - 257805 + g 71 -9.7 -3.70674 | overlap 257772 257783 GCTCGGCACCGTTGT CGGTCGTGT AGA GCACGATCG TGTTTTCCGTGATGC TERM 169 258024 - 258006 - G 71 -5.3 -4.42386 | gap 1 TGGCGATCGATAAAA TCCTTCGC TGCC GCGA-GGA ACTCTTCGTCGACCG Smed_3806 259169 - 259525 + | hypothetical protein TERM 170 259605 - 259579 - T 100 -16.6 -4.00532 | opp_overlap 259602 CTCGGAAACAGGAAA CGCGCCGTATCT CTC AGATGCGGCGCG CCTTGGAGCGGGATG TERM 171 259602 - 259659 + T 95 -13.9 -3.95852 | opp_overlap 259579, overlap 259605 ATCTCTCAGATGCGG CGCGCCTTGGAGCGGGATGAGTGCGCG GTTT CGCGCCCGCATCCCGCCCTACTGCATG TTTCCTTAATCGGAT TERM 172 259605 - 259656 + T 86 -16.4 -2.73624 | overlap 259602 TCTCAGATGCGGCGC GCCTTGGAGCGGGATGAGTGCGCG GTTT CGCGCCCGCATCCCGCCCTACTGC ATGTTTCCTTAATCG Smed_3807 260856 - 259774 - | oxidoreductase domain-containing protein TERM 173 260536 - 260554 + g 76 -13.1 -3.52111 | GGCGCGCTCGGCCGC GGCCGCC ATCTC GGCGGCC TTCTCGTAATTTTCG Smed_3808 261761 - 260868 - | hypothetical protein Smed_3809 263018 - 261990 - | ABC transporter related TERM 174 262568 - 262557 - G 76 -5.8 -4.64861 | CTCGTCGAAAAGAAA GACC TTCG GGTC TCGTACGATCGCCCG Smed_3810 263858 - 263028 - | binding-protein-dependent transport systems inner membrane component TERM 175 263563 - 263549 - G 83 -9.2 -4.26076 | overlap 263552 GGATCGTCAGCAAAA GCAGCC CCC GGCCGC GGAAGCGCACCCGGG Smed_3811 264844 - 263858 - | binding-protein-dependent transport systems inner membrane component TERM 176 264890 - 264928 + r 73 -12.5 -2.76815 | gap 2, overlap 264889 CGCCCGCGCCGTTGA CC-TTG-GCCCGGATGGCA GGG TGCCATCCGGGCGCTGCGG ATTCTTACCAGGAGT Smed_3812 266204 - 264933 - | extracellular solute-binding protein Smed_3813 266681 - 267703 + | alanine racemase Smed_3814 268457 - 267768 - | GntR family transcriptional regulator TERM 177 267890 - 267865 - G 71 -8.9 -3.93057 | TGGAAAACCAGGAAA GCGGACGCCTC TTCG AAGGCGCCTGC CCGGCAAAGGCGGAT Smed_3815 268546 - 269151 + | tripartite ATP-independent periplasmic transporter DctQ Smed_3816 269151 - 270416 + | TRAP dicarboxylate transporter, DctM subunit TERM 178 270738 - 270680 - g 76 -13 -3.51708 | overlap 270676 CAGCTCGGAAACGAA GCGGCCATGCTGCAGCAGATGCAGAGCG GCG CGCTCGATCTCGGCTGGATCATGACCGC CGAACTCGGCTCGCG Smed_3817 270446 - 271441 + | TRAP dicarboxylate transporter- DctP subunit TERM 179 271460 - 271493 + F 100 -14.5 -4.614 | overlap 271462 TTCGATCAGTTCAGC GCCAGCCGGCTACGG CTCT CCGTGGCCGGCTGTA TTTTATCTGCTTGCA TERM 180 271462 - 271491 + F 100 -21.5 -3.91421 | overlap 271460 CGATCAGTTCAGCGC CAGCCGGCTACGG CTCT CCGTGGCCGGCTG TATTTTATCTGCTTG Smed_3818 271574 - 272788 + | hypothetical protein Smed_3819 273833 - 272805 - | monosaccharide-transporting ATPase TERM 181 273657 - 273632 - G 84 -11.1 -4.14392 | gap 1, overlap 273633 CGCCAAGCGCGAAAA GGCCGCGCACCA CGG TGGAGCGCG-CC ATATCGAACAGGTTG Smed_3820 275421 - 273835 - | ABC transporter related TERM 182 274055 - 274038 - G 76 -5.5 -4.63527 | GGATGATGCGAAAAA TCGTGTC CTTC GACCCGA CATCGACACCGACGG TERM 183 274782 - 274755 - G 71 -6.2 -4.25104 | gap 1, overlap 274756 TGTGCGTCACGAAAA GGACCGACACGCC TTT GGCATGCAGG-CC GTGAACGACGCGAAT TERM 184 274951 - 274939 - G 71 -4.7 -4.41348 | opp_overlap 274948, overlap 274941 CGGCGTCGAAAGAAA GGCGG GCT CCGTC GGCAGGCCGACCTCC TERM 185 275135 - 275156 + g 72 -2.2 -4.68103 | gap 1 CCTGCCGCCAAGGCG CCGATCGGC GTCAG GCCT-TCGG TTTTCTTGCCATTGA Smed_3821 276505 - 275504 - | periplasmic binding protein/LacI transcriptional regulator Smed_3822 277572 - 276586 - | monosaccharide-transporting ATPase Smed_3823 277942 - 278934 + | Glycerone kinase Smed_3824 278944 - 279585 + | dihydroxyacetone kinase, L subunit TERM 186 280477 - 280500 + G 89 -17.4 -3.14132 | opp_overlap 280461 TATCTCGCGGCCGGC GCGGTCGGCG TCGT CGCCGGCCGC TTCATCGACGAGCGC Smed_3825 279700 - 281787 + | Glycerone kinase TERM 187 282441 - 282430 - g 76 -7.2 -4.37092 | overlap 282431 ATGGTTGCGACAAAA GGCC GTGC GGCC CGGCTTGGAGAACGC Smed_3826 281893 - 282531 + | dihydroxyacetone kinase, L subunit Smed_3827 282781 - 284127 + | transposase IS4 family protein Smed_3828 284404 - 284177 - | hypothetical protein TERM 188 284603 - 284620 + r 80 -14.1 -2.80988 | overlap 284601 TGAAAAGACCCCTTC GCGCCGC AGAC GCGGCGC TGCTTCATCCTGTGA Smed_3829 285255 - 284665 - | hypothetical protein Smed_3830 285419 - 285580 + | hypothetical protein TERM 189 285610 - 285599 - T 70 -2.2 -4.8048 | gap 1, overlap 285600 GTGCGACAGCAAAAA CGCGG ACG CCG-G AGCAAGTGTTACAGA Smed_3831 287550 - 285619 - | adenylyl cyclase class-3/4/guanylyl cyclase TERM 190 285998 - 286015 + g 78 -10.5 -4.08216 | GCCATCGGATGCAGC CGCCGGG CCCG CTCGGCG TTTTGCACAGCCTCG Smed_3832 288692 - 287784 - | N-acetylneuraminate lyase Smed_3833 289641 - 288706 - | dihydrodipicolinate synthetase TERM 191 289488 - 289498 + g 76 -8.2 -4.17296 | GGCTGTGGAACTCGC CGGC GGT GCCG TTTGTGTATATGCCC Smed_3834 290918 - 289638 - | TRAP dicarboxylate transporter, DctM subunit Smed_3835 291436 - 290918 - | tripartite ATP-independent periplasmic transporter DctQ TERM 192 291486 - 291528 + r 93 -13.5 -3.86897 | gap 1, overlap 291488 CCAGCCGCGCCTGCG GGGTGGCTGGCTACAGGTCG GCCC CGACCTGTAGCC-GTCGCTA TTTATCGGAGATCGA TERM 193 291488 - 291526 + r 100 -18.3 -3.5241 | gap 1, overlap 291486 AGCCGCGCCTGCGGG GTGGCTGGCTACAGGTCG GCCC CGACCTGTAGCC-GTCGC TATTTATCGGAGATC Smed_3836 292501 - 291530 - | TRAP dicarboxylate transporter, DctP subunit Smed_3837 293329 - 292628 - | transcriptional regulator NanR Smed_3838 294047 - 293484 - | hypothetical protein TERM 194 294215 - 294239 + G 100 -5.6 -5.40072 | overlap 294217 GTTGCGAGGAGCGCA GATCGCCGCC CTCTC GGCTGCGATG TTTTTTTCGGGCAGC TERM 195 294217 - 294237 + G 79 -8.2 -4.34482 | overlap 294215 TGCGAGGAGCGCAGA TCGCCGCC CTCTC GGCTGCGA TGTTTTTTTCGGGCA TERM 196 294737 - 294767 + G 82 -6.1 -4.83615 | gap 1 GGCCGATGAGCACGG GCCGGCGCT-TTGC GACG GCAAGATCGACGGC TTTTTCTACGGCGTC Smed_3839 294180 - 295163 + | TRAP transporter solute receptor TAXI family protein TERM 197 295325 - 295312 - f 71 -8.1 -4.07618 | GCTTCAAGAACGAAA GGTCG ATGT CGACC TCGAGCAGCTGGTTG TERM 198 295990 - 296024 + G 73 -11.3 -3.54475 | overlap 296002 TTCCATCGCATTGCT CGGACACCTGCGCGG CGGCC CCGCCAAGGTGGCCG TTGTCTCCTCGGCCC TERM 199 296146 - 296114 - g 84 -14.1 -3.76402 | overlap 296137 296138 ATTCCACTGATGAAA CGCACCGGGCTTTCC GGC GTAAAGGCCGGCGCG ATCGAGGCCAGCGCC Smed_3840 295376 - 297889 + | TRAP transporter, 4TM/12TM fusion protein Smed_3841 298895 - 297897 - | regulatory protein LacI TERM 200 299074 - 299062 - g 100 -6.3 -5.42259 | overlap 299066 TGACCGGGAAAAAAA TCGAT TCT ATCGA CCCGACAGACCAAGC TERM 201 299572 - 299610 + G 91 -9.5 -4.56775 | overlap 299573 TGAATGTCGGGCTTG CCCTTGCGACGATCGCC CTGAC GGTGATCTTCGCCAGGA TTTTTACAGGCACGT TERM 202 299573 - 299609 + G 74 -13 -3.33744 | overlap 299572 GAATGTCGGGCTTGC CCTTGCGACGATCGCC CTGAC GGTGATCTTCGCCAGG ATTTTTACAGGCACG Smed_3842 299046 - 300395 + | xanthine/uracil/vitamin C permease Smed_3843 300408 - 301808 + | amidohydrolase TERM 203 302239 - 302214 - g 74 -10.3 -3.75153 | opp_overlap 302229 CCGGCGTAACCGAAA CGGCGACCGGC ATCG GCGGGCCACCG CTCGCTCTCCTCTAC Smed_3844 301805 - 302512 + | hypothetical protein Smed_3845 303612 - 302533 - | opine dehydrogenase TERM 204 303129 - 303096 - G 70 -7.3 -4.07687 | gap 1, opp_overlap 303096 ATCGGTCGCCGAAAA GCTCGCTGCAGAGCGC CTT GCCCTCGGCCGC-AGC AGCTTTCGGCAGGGT TERM 205 303475 - 303457 - G 78 -10.2 -4.08064 | AACCGGGCCGGAAAA CTCGACGG CGC CCGTCGCG GTCAGCGGCTCTCCC Smed_3846 303777 - 304808 + | LysR family transcriptional regulator Smed_3847 304805 - 305905 + | extracellular solute-binding protein Smed_3848 306037 - 307020 + | binding-protein-dependent transport systems inner membrane component Smed_3849 307031 - 307822 + | binding-protein-dependent transport systems inner membrane component TERM 206 308801 - 308787 - g 72 -7.8 -4.11216 | overlap 308788 308791 CGTCGATCTCGAAAA CGGAGC GCA GCTCCA CCTGCAGCTCGACCC Smed_3850 307825 - 308895 + | spermidine/putrescine ABC transporter ATPase subunit TERM 207 309702 - 309649 - g 73 -10.7 -3.66178 | opp_overlap 309671 GCGCTCAAGGGCAAA CGCGTCGTCGTCATCGGCGTCGGCG CTTC CGCCGTCGACAACGCGGCCGAAGCG CTTGAGTCCGGTGCA TERM 208 309671 - 309703 + G 81 -15.6 -3.06796 | gap 1, opp_overlap 309649 TCGTCATCGGCGTCG GCGCTTCCGCCGTCG ACAA CG-CGGCCGAAGCGC TTGAGTCCGGTGCAG Smed_3851 308974 - 310440 + | hypothetical protein Smed_3852 310477 - 310980 + | hypothetical protein Smed_3853 310982 - 311560 + | uncharacterized peroxidase-related enzyme Smed_3854 312970 - 311627 - | hypothetical protein Smed_3855 313857 - 312967 - | RpiR family transcriptional regulator TERM 209 314205 - 314229 + G 78 -14.3 -3.01712 | opp_overlap 314190 314210, overlap 314207 GCGGTTGGTGATCCA GATGACCAGCG AGG CGCTGGGCATC TATTCGCCGGCCGAA Smed_3856 313948 - 314805 + | hypothetical protein TERM 210 314830 - 314853 + F 73 -11 -3.38291 | overlap 314835 TCCGTGGCCCGTAGC CGGAACCGGT TAAC GCCGGTTTCG TTCTCCCATTATCAG Smed_3857 314970 - 315155 + | hypothetical protein TERM 211 315188 - 315208 + F 76 -13.9 -2.71144 | opp_overlap 315185, overlap 315197 TACCCGACCCAATCG GCCCCGGCC CCG GGCCGGGGA TAATTCCGCCGAATC Smed_3858 315409 - 315597 + | hypothetical protein Smed_3859 316875 - 315667 - | major facilitator transporter TERM 212 315977 - 315965 - G 80 -4.7 -4.85599 | GCCACTGCATAAAAA GCGCC GAG GTCGC GCACGAAGAAATAGG TERM 213 317108 - 317062 - R 71 -13.1 -2.52464 | gap 2, opp_overlap 317058, overlap 317078 GTCGTGTGCAATCGA GTTCA-GGCGGA-TGAGAGGCCG GTG CGCCCTCTCAGCCCGCCATGATC GATGTATCGACGACC Smed_3860 317524 - 317093 - | OsmC family protein TERM 214 317293 - 317272 - G 78 -10.1 -4.08692 | GAATGCGGGTGAAAA CGCGCGG GTCCTGCT CCGCGCG GTCTGCGTCCAACTC Smed_3861 318630 - 317602 - | proline racemase TERM 215 318665 - 318680 + r 77 -10.4 -3.7941 | opp_overlap 318653 318654 TAAGCGAGCGCGGCT GCGGGT GAAA ACCCGC TTATTATCCGCCCTA Smed_3862 320384 - 318693 - | hypothetical protein Smed_3863 321382 - 320381 - | proline racemase Smed_3864 322638 - 321397 - | D-amino-acid dehydrogenase Smed_3865 323361 - 322639 - | ABC transporter related TERM 216 322768 - 322741 - G 91 -9.2 -4.65895 | gap 1, opp_overlap 322764 CCCCTGATGGAAAAA CGCCACGCGAT CCGACAC ATCGCG-GGCG AAGGCCATTTCATGC Smed_3866 324007 - 323354 - | polar amino acid ABC transporter, inner membrane subunit Smed_3867 324683 - 324018 - | polar amino acid ABC transporter, inner membrane subunit TERM 217 324737 - 324708 - R 84 -15.7 -2.52543 | ACCCCTCGGAATGCA GCGACGGTGCGGG TTGC CCCGCACCGTCAG ACGATCCTCGGATCA Smed_3868 325556 - 324750 - | extracellular solute-binding protein TERM 218 325184 - 325198 + g 71 -11.4 -3.53091 | TCCCGGACTTCTCGT TGGCGG TTA CCGCCA TTTCGAAGGCGAAGT TERM 219 325688 - 325713 + r 100 -13.3 -4.63218 | opp_overlap 325688, overlap 325668 325683 325682 CTTTCGCAATGGAAA GGGGCTTTCCC TTGT GGAAAAGCCCC TTTTATTGCGCGAAC TERM 220 325713 - 325688 - R 95 -15.5 -3.75153 | opp_overlap 325668 325683 325682 325688 CTTTCGCAATGGAAA GGGGCTTTCCC TTGT GGAAAAGCCCC TTTTATTGCGCGAAC Smed_3869 327257 - 325740 - | aldehyde dehydrogenase Smed_3870 327573 - 328610 + | malate/L-lactate dehydrogenase TERM 221 328670 - 328627 - f 81 -11 -3.79747 | gap 1 GCAGGCACGATGAAA CTCCTTCCTCCCTCGTCACTG TGC CTGTAACG-GGGACGAGGGAG GGCCGCGTCTGCGGT Smed_3871 328762 - 329139 + | hypothetical protein Smed_3872 329189 - 330229 + | peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase TERM 222 330363 - 330399 + T 85 -11.6 -4.07877 | gap 1, opp_overlap 330371, overlap 330364 TATCATCCCGCTCCA CGGAGAAAGGCACGCCC GACC GGG-GTGCCCTTCTCCA TTCTTTATCGCCTGA TERM 223 330364 - 330398 + T 85 -15.1 -3.04244 | gap 1, opp_overlap 330371, overlap 330363 ATCATCCCGCTCCAC GGAGAAAGGCACGCCC GACC GGG-GTGCCCTTCTCC ATTCTTTATCGCCTG TERM 224 330391 - 330371 - T 72 -9 -3.91897 | gap 1, opp_overlap 330364 330363 CGCTCCACGGAGAAA GGCACGCCC GACC GGG-GTGCC CTTCTCCATTCTTTA Smed_3873 331377 - 330415 - | dihydrodipicolinate synthetase Smed_3874 332208 - 331498 - | GntR family transcriptional regulator Smed_3875 333469 - 332366 - | putative adenylate/guanylate cyclase TERM 225 333636 - 333682 + G 76 -8.5 -4.12188 | gap 1, opp_overlap 333635 333631 333636 TCCGATGCAAGAAAC CCTCGTCGTCCGCCGC-GAGAC GCAT GTCTCGGCGCCGCCCGCCGCGG TTTTCGCCCTGCTCA Smed_3876 333625 - 334074 + | activator of Hsp90 ATPase 1 family protein Smed_3877 334128 - 334730 + | hypothetical protein Smed_3878 334831 - 335106 + | hypothetical protein TERM 226 335787 - 335802 + G 70 -10.4 -3.55122 | overlap 335782 CTTCGCGTCCCTATA TGGCCG TCTA CGGCCA TTCGTTTCCCTCATG Smed_3879 335156 - 336220 + | hypothetical protein TERM 227 337380 - 337370 - gT 71 -8.2 -3.91144 | overlap 337371 CGTACAGCCTAGAAA GCGC GTT GCGC CGGCGTGGAAGGGTT Smed_3881 338521 - 337544 - | hypothetical protein Smed_3880 336267 - 337646 + | hypothetical protein Smed_3882 339159 - 338563 - | phosphoglycerate mutase TERM 228 338703 - 338725 + g 71 -13.4 -2.56271 | opp_overlap 338689, overlap 338701 CCACGGTCTTGATGA CGTCCGCGTG GCT CACGAGGACG ATCTTCTCCTGCCCG Smed_3883 340259 - 339156 - | myo-inositol-1-phosphate synthase TERM 229 340999 - 341022 + G 70 -12.4 -3.21276 | opp_overlap 340963, overlap 340991 340998 341005 TGCCGGACGGCTGCT GCGCAACCCG GCAG CGGGTTTCGC TATTGTCGACGAAGG Smed_3884 340409 - 342157 + | hypothetical protein Smed_3885 343286 - 342261 - | oxidoreductase domain-containing protein Smed_3886 344271 - 343279 - | alcohol dehydrogenase Smed_3887 344603 - 345709 + | NAD-dependent epimerase/dehydratase TERM 230 345746 - 345731 - g 83 -4.6 -5.02074 | overlap 345733 GGACCGTCGAAAAAA GTCGGC ATCT GGCGAC GCCTGCGCTCTCCGG Smed_3888 345706 - 346827 + | NAD-dependent epimerase/dehydratase Smed_3889 346824 - 347975 + | glycosyl transferase group 1 TERM 231 348098 - 348065 - g 85 -14.5 -3.55444 | opp_overlap 348091, overlap 348070 GTGTCATGCGTGAAA TCACACGCCGCGGCC ATCT GGCCGTGGCGCTTGA GCCGGGCGATTCCTG TERM 232 348093 - 348070 - g 81 -15.2 -3.00704 | opp_overlap 348091, overlap 348065 ATGCGTGAAATCACA CGCCGCGGCC ATCT GGCCGTGGCG CTTGAGCCGGGCGAT Smed_3890 347980 - 349110 + | hypothetical protein TERM 233 349896 - 349907 + G 70 -7.2 -4.07568 | opp_overlap 349904 TCGCGCTCCAGCATG GCCG ATAA CGGC TTTTCGCCGGCAACC Smed_3891 349107 - 350192 + | hypothetical protein TERM 234 350669 - 350690 + G 73 -6.5 -4.32177 | gap 1, overlap 350671 CTGCGTGACGAGTTC GCGGCA-CGG CGG CCGGTGCCTC TTTATTGTGCCGTCG Smed_3892 350189 - 351307 + | hypothetical protein TERM 235 351372 - 351386 + G 83 -12.8 -3.89346 | AAGATCATCCTGGTT GCCGGC GGC GCCGGC TTTGTCGGATCGCAC Smed_3893 351327 - 352367 + | NAD-dependent epimerase/dehydratase Smed_3894 352370 - 353143 + | methyltransferase type 11 Smed_3897 354263 - 354012 - | hypothetical protein Smed_3898 354604 - 354260 - | hypothetical protein Smed_3899 355785 - 354820 - | putative nutrient deprivation-induced protein TERM 236 355687 - 355704 + g 86 -4.9 -5.13741 | gap 1 TCCCGGCGACATGCG CTCC-TGA ATT TCATGGAG TTTTTCTTCAATTCG Smed_3900 356201 - 355782 - | putative nutrient deprivation-induced protein Smed_3901 356766 - 356194 - | putative nutrient deprivation-induced protein Smed_3902 357059 - 356886 - | hypothetical protein Smed_3903 357222 - 357917 + | transport-associated Smed_3904 358473 - 357970 - | hypothetical protein Smed_3905 358652 - 358831 + | hypothetical protein Smed_3906 359037 - 359438 + | cupin 2 domain-containing protein TERM 237 360143 - 360175 + G 76 -13.4 -3.1552 | gap 1, opp_overlap 360142, overlap 360142 ACGGTACCGCAATAG CGCTCAGCGGCGCGG AATA CCG-GCTGCTGCGCG TCTTCGTCGATCACC Smed_3907 359656 - 360393 + | two component transcriptional regulator TERM 238 360428 - 360450 + G 71 -6.1 -4.32034 | opp_overlap 360422 TGGAGTTAACCTGTG GCCGCACAC GCTCA GGGCGCGGC TTTTCGTCATCCTCC Smed_3908 360393 - 361718 + | integral membrane sensor signal transduction histidine kinase TERM 239 361770 - 361747 - T 100 -21 -3.64198 | opp_overlap 361747 GCGCCATACAGAGAA GCGGGGCGGC GCCT GCCGCCCCGC TTTGTTGCGTCGATC TERM 240 361747 - 361770 + T 100 -21 -4.2123 | opp_overlap 361747 GCGCCATACAGAGAA GCGGGGCGGC GCCT GCCGCCCCGC TTTGTTGCGTCGATC Smed_3909 362458 - 361799 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 241 362475 - 362497 + r 71 -12 -2.94912 | overlap 362480 TTTCTCTCCTTGTAT CAGGAGGCGC AGG GCGCCTTTTG TCTCTCGATTGACGA TERM 242 362480 - 362492 + r 90 -10.5 -4.62471 | overlap 362475 CTCCTTGTATCAGGA GGCGC AGG GCGCC TTTTGTCTCTCGATT Smed_3910 363717 - 362671 - | alpha/beta hydrolase fold Smed_3911 364668 - 363994 - | ThiJ/PfpI domain-containing protein TERM 243 365125 - 365141 + G 72 -8 -4.13728 | TGCAGGGGGCGAGAG TTCCGC CCCCC GCGGAA TTTTGACGATCTCTG TERM 244 365575 - 365538 - g 81 -15.5 -3.04461 | gap 1, opp_overlap 365529 GATGCATCGTCAACA GCGTGCGCGCCGCCGCCG CTT CGGCAGCTGC-CGGACGC GGTCTGACCCGGCTT Smed_3912 364865 - 365812 + | LysR family transcriptional regulator Smed_3913 365935 - 366648 + | short-chain dehydrogenase/reductase SDR Smed_3914 366695 - 366934 + | 4-oxalocrotonate tautomerase TERM 245 366934 - 366973 + T 88 -11.4 -4.13767 | overlap 366936 GGCGGCTAAATCCTG AAGCCTGATCGCTTCACC GCCC GGTGGAGCGATCCAGCTG TTTTCGGCTACGCCC TERM 246 366936 - 366971 + T 88 -14 -3.6692 | overlap 366934 CGGCTAAATCCTGAA GCCTGATCGCTTCACC GCCC GGTGGAGCGATCCAGC TGTTTTCGGCTACGC Smed_3915 368108 - 366981 - | pyrroloquinoline quinone biosynthesis protein PqqE Smed_3916 368401 - 368105 - | coenzyme PQQ synthesis D Smed_3917 369168 - 368398 - | pyrroloquinoline quinone biosynthesis protein PqqC Smed_3918 370076 - 369165 - | pyrroloquinoline quinone biosynthesis protein PqqB TERM 247 370363 - 370385 + r 81 -12.6 -3.56092 | CGCTGTTCCGGCAGA GCCCGGCGGC GCC GTAGCCGGGC TTTCAGGCATCGTGC Smed_3919 371526 - 370585 - | LysR family transcriptional regulator TERM 248 372551 - 372567 + G 83 -9.4 -4.27316 | opp_overlap 372544 TCCAGAAAGCCTGCA CCAGCG CGTGC CGCTGG TTTTCGGTTCACGCC TERM 249 372642 - 372661 + G 72 -7.8 -4.1552 | ATCGGCGAACGCGCT CCGCTCTT CGGC AAGCGCGG TTTGTTCCGGGCCTG Smed_3920 371628 - 372677 + | fructose-1,6-bisphosphatase Smed_3921 372688 - 373557 + | phosphoribulokinase TERM 250 374825 - 374857 + G 73 -12.7 -3.17763 | GAGCACGGCATGGCG GCCGCTATGAACGGC ATC GCGCTTCATGGCGGC TTCATCCCCTATGGC Smed_3922 373568 - 375655 + | transketolase TERM 251 376503 - 376518 + G 75 -11.8 -3.54424 | CACGGATCTGCGCCT GGCGGC GGCC GCCGCC TTTCGCCGCGTCGCC Smed_3923 375658 - 376737 + | fructose-1,6-bisphosphate aldolase rbcL 376768 - 378228 + | ribulose bisophosphate carboxylase Smed_3925 378252 - 378641 + | ribulose-bisphosphate carboxylase Smed_3926 378652 - 379587 + | CbxX/CfqX monofunctional TERM 252 380152 - 380128 - g 70 -10 -3.55444 | gap 2, opp_overlap 380115 380127 GCGTGACGCCGGAAA CCGCGCCGCTGG TTG CC-GCGGC-CGG TGCGGATGTGCTCGT Smed_3927 379584 - 380270 + | ribulose-phosphate 3-epimerase TERM 253 380719 - 380707 - g 74 -9.1 -3.90112 | CTTCGCGCAAGGAAA TCGGC CCT GCCGA TCTGAGACGCGACCT Smed_3928 380274 - 380840 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Smed_3929 381993 - 381061 - | transposase IS116/IS110/IS902 family protein TERM 254 382402 - 382424 + r 81 -12.7 -3.5944 | GTAGCTGCAGCAGGT CAGGCCGGC AGCGC GCCGGTCTG TTTGGCGATGTGGGT Smed_3930 382970 - 382401 - | glutathione-dependent formaldehyde-activating enzyme Smed_3931 383881 - 383090 - | ABC-2 type transporter TERM 255 383825 - 383808 - G 83 -9.1 -4.37092 | AGTGCTGCCAGAAAA CGTCCGC GCTG GCGAACG AAGCGCAGGTTTTCG Smed_3932 384606 - 383878 - | ABC transporter related TERM 256 384228 - 384244 + g 74 -13.7 -2.87211 | overlap 384238 CCTGCTCGTCGGCTC GCTCGGC CAT GCCGAGC TGTGTCAGCGCGGCT TERM 257 384238 - 384258 + g 71 -12.5 -3.05384 | overlap 384228 GGCTCGCTCGGCCAT GCCGAGCTG TGT CAGCGCGGC TTCGATCGCCACAGC Smed_3933 385240 - 384593 - | ABC transporter related Smed_3934 386016 - 385237 - | binding-protein-dependent transport systems inner membrane component Smed_3935 386974 - 385991 - | putative ABC transporter periplasmic solute-binding protein TERM 258 386565 - 386577 + g 74 -4.7 -4.63218 | overlap 386566 386567 TTGTCGAGCGGACCT CCGGC GAT GCCGA TTTTCTTGCCGGCAA Smed_3936 387481 - 387038 - | hypothetical protein TERM 259 387427 - 387415 - G 70 -10.5 -3.55071 | CCATATCGGCGCAAA GCGGC GCG GCCGC GGCCGGACCAGCGAG Smed_3937 388526 - 387522 - | YVTN beta-propeller repeat-containing protein Smed_3938 389817 - 388528 - | hypothetical protein TERM 260 389706 - 389722 + g 72 -4.3 -4.55287 | CGAGCAGACCCGATA GGTGAGG GCA CTTCCCC TTTTCTCTGAATCGC Smed_3939 389937 - 390446 + | hypothetical protein Smed_3940 391031 - 390486 - | hypothetical protein Smed_3941 391885 - 391028 - | extracellular solute-binding protein Smed_3942 392381 - 391854 - | putative cytochrome c protein TERM 261 392435 - 392408 - R 100 -22.8 -3.14132 | TGGGGCTGGTATGAA TCGGCGCGGGCT TGAG AGCCCGCGCCGA TTCCCGGGCTAAGAT Smed_3943 394262 - 392457 - | Pyrrolo-quinoline quinone Smed_3944 394849 - 394439 - | cytochrome c class I Smed_3945 395693 - 394863 - | S-formylglutathione hydrolase TERM 262 395252 - 395229 - G 73 -11 -3.57144 | TTTCGGATTGCGAAA GGCGATGGTG AGGG CACCATGGCC GCCCATCGAGTGCCC Smed_3946 396829 - 395702 - | S-(hydroxymethyl)glutathione dehydrogenase TERM 263 397033 - 397044 + G 70 -7.2 -4.06502 | GCGTTTGGTCCAATG CGCC GCCT GGCG TTTGGTTTGACGGTC Smed_3947 397000 - 397638 + | hypothetical protein Smed_3948 398762 - 397704 - | beta-lactamase domain-containing protein TERM 264 399458 - 399446 - g 86 -6.9 -5.04325 | overlap 399448 GGTAAAGTACAAAAA CCCCG CCG CGAGG CGCAGATCATGATCC Smed_3949 398915 - 399727 + | sulphur oxidation protein SoxZ Smed_3950 400173 - 399820 - | hypothetical protein Smed_3951 400934 - 400170 - | hypothetical protein TERM 265 400868 - 400856 - G 93 -3.3 -5.55664 | CGATCAGGAAAAAAA TGCGC ATC GCGGA TCTACCGTCTGATAT Smed_3952 403202 - 400959 - | histidine kinase TERM 266 402087 - 402103 + g 82 -3 -5.10968 | gap 1 AGCTTCCTTGGCGTG TCGAAGG GCGG CCT-CGA TTTTTGTCTGTTCGT TERM 267 402755 - 402765 + g 73 -6.8 -4.2679 | overlap 402736 CCGGGTGCGGCCGCC CGGA CAC TCCG TTTTCGTCGCGGTTC Smed_3953 404368 - 403199 - | hypothetical protein TERM 268 403706 - 403681 - G 72 -11.9 -3.31144 | gap 1, opp_overlap 403701, overlap 403684 CGTTGATTTCCAGAA CCA-GCCGTTCC TCC GGAACGGCGCGG GTCACCACCATGCGC TERM 269 403702 - 403684 - G 77 -14.6 -2.83271 | opp_overlap 403701, overlap 403681 TGATTTCCAGAACCA GCCGTTCC TCC GGAACGGC GCGGGTCACCACCAT Smed_3954 405101 - 404412 - | two component LuxR family transcriptional regulator Smed_3955 405550 - 405341 - | hypothetical protein TERM 270 405743 - 405763 + r 83 -7.6 -4.68724 | gap 1 GACGACATCGTGGTT CTTCGGCGC GACG GC-CCGAAG TTTTCTCTTCGCTGC TERM 271 405834 - 405865 + r 100 -14.5 -4.20783 | AACGCGTGTTGTCGA GAGGCCCGGC-CCGC ATCC GCGGCGCCGG-CCTC TTTATTAAATCGGAT Smed_3957 406240 - 405893 - | RpiR family transcriptional regulator Smed_3958 406857 - 406237 - | Dual specificity protein phosphatase Smed_3959 407870 - 406914 - | inositol-phosphate phosphatase TERM 272 407830 - 407869 + g 86 -13.4 -3.89302 | opp_overlap 407821 407837, overlap 407831 407833 TGAAATCGGTCTGTC GGAGAAAGGCCGGCGCGG GGCC CCGCGCCGGCCTGAATCA TTTGCTGTAATTGGT TERM 273 407831 - 407868 + g 87 -16.9 -2.92858 | opp_overlap 407821 407837, overlap 407830 407833 GAAATCGGTCTGTCG GAGAAAGGCCGGCGCGG GGCC CCGCGCCGGCCTGAATC ATTTGCTGTAATTGG TERM 274 407833 - 407866 + g 75 -13.7 -3.00986 | opp_overlap 407821 407837, overlap 407831 407830 AATCGGTCTGTCGGA GAAAGGCCGGCGCGG GGCC CCGCGCCGGCCTGAA TCATTTGCTGTAATT TERM 275 407862 - 407837 - G 100 -23.3 -3.85698 | opp_overlap 407833 407831 407830, overlap 407821 GGTCTGTCGGAGAAA GGCCGGCGCGG GGCC CCGCGCCGGCC TGAATCATTTGCTGT Smed_3960 408994 - 407867 - | ABC transporter periplasmic solute-binding protein Smed_3961 410201 - 409077 - | ABC transporter periplasmic solute-binding protein TERM 276 410043 - 410070 + g 76 -7 -4.4078 | gap 1, overlap 410011 CATCTCGACGATCTT GCCGGT-GCTGTC GTA GACGGTGATCGGC TTTTCCTTGCGGGCC TERM 277 410138 - 410113 - G 74 -10.3 -3.71873 | GCATCCATATCGAAA GGCTCCTCGGC CCAA GCCCCGGAGCC AAGCACGCACAGCAT Smed_3962 411388 - 410252 - | ABC transporter related Smed_3963 413238 - 411388 - | binding-protein-dependent transport systems inner membrane component TERM 278 412910 - 412896 - G 73 -7.1 -4.3586 | opp_overlap 412899 CGAGGGACAGCAAAA TGGCG CCCAT CGCCA CCGAGAGCGTATTGA TERM 279 413162 - 413194 + g 85 -14.7 -3.53811 | TTCAGCCGATAGCGC CAGGCCTGCCAGGCC GTT GGCGCGGCAGGCCCG TTTGCGGCCGCTACC TERM 280 413433 - 413409 - H 78 -3 -5.10461 | opp_overlap 413424 CCGACGGAATAAAAA TTCCATAA TTGCCGTCG TTATGGAA CGTATGATCGATTCA Smed_3964 413700 - 414686 + | periplasmic binding protein/LacI transcriptional regulator Smed_3965 416391 - 414748 - | sodium-dependent inorganic phosphate (Pi) transporter TERM 281 415912 - 415900 - G 76 -10.5 -3.88291 | CAGCATCGCCAGAAA GGCGC TGA GCGCC GGCGACTGCCGCAGC Smed_3966 418182 - 416464 - | metallophosphoesterase TERM 282 417290 - 417276 - G 73 -8.5 -4.07568 | TGGTCTCGCCGAAAA GCGCC CCCTC GGCGC CGGTCGCACCGTCGA Smed_3967 418793 - 418176 - | dual specificity protein phosphatase TERM 283 418777 - 418792 + g 74 -4.7 -4.54753 | ATGGCAGGTCGGTCG TGGAC AGGTGC GTCCA TTCTTTTTCCTCTTT Smed_3968 419689 - 418829 - | inositol-phosphate phosphatase TERM 284 419241 - 419278 + g 93 -19.1 -3.31144 | opp_overlap 419231, overlap 419242 TCGAAGCGGGCCGTT TGCGCGACGTGGATCGG AACC CCGTTCCGCGTCGCGCC TTGTCCGCGTCGCGC TERM 285 419242 - 419277 + g 100 -22.6 -2.58544 | opp_overlap 419231, overlap 419241 CGAAGCGGGCCGTTT GCGCGACGTGGATCGG AACC CCGTTCCGCGTCGCGC CTTGTCCGCGTCGCG TERM 286 419506 - 419490 - G 76 -9.4 -4.07568 | CTGTCTTCCGGAAAA TGCGCG GCGAG CGCGCA ACGGATATGCGCCTC TERM 287 419855 - 419910 + r 73 -11.8 -3.14132 | CGTGATCGCTTGTGA TGGCTAGCGCGGGATGAGGAGAAGCG TGTG CACTTTTCCTCCTTCCACGCTAACCC TTGATGAAGGCGAGC Smed_3969 420734 - 419904 - | alpha/beta hydrolase fold TERM 288 420848 - 420812 - R 87 -12.9 -3.91084 | overlap 420813 420816 CCATCGCCAACGAAA CTGAGGCGCCCGCAAGC AGC GCTTGCCGGCGCGACAA TTGAAGAGAATCGAT TERM 289 420847 - 420813 - R 82 -14.2 -2.94329 | overlap 420812 420816 CATCGCCAACGAAAC TGAGGCGCCCGCAAGC AGC GCTTGCCGGCGCGACA ATTGAAGAGAATCGA TERM 290 420844 - 420816 - R 80 -14.5 -2.70979 | overlap 420813 420812 CGCCAACGAAACTGA GGCGCCCGCAAGC AGC GCTTGCCGGCGCG ACAATTGAAGAGAAT Smed_3970 422538 - 420931 - | protein of unknown function DUF894 DitE Smed_3971 422978 - 422535 - | DoxX family protein TERM 291 422841 - 422819 - G 76 -10.6 -3.85817 | overlap 422820 ATGGCGCGGGATAAA GGCCGAAATG GTC CATTTCGGCG ATCGCGCCGCTAAAA TERM 292 422840 - 422820 - G 74 -14.1 -2.91276 | overlap 422819 TGGCGCGGGATAAAG GCCGAAATG GTC CATTTCGGC GATCGCGCCGCTAAA Smed_3972 424867 - 422990 - | amidohydrolase 3 Smed_3973 425259 - 424975 - | hypothetical protein TERM 293 425106 - 425082 - G 76 -11.5 -3.76224 | opp_overlap 425094 425095, overlap 425104 TGTGGACCCAGGAAA CTGTTACCGGA TTG CCCGATAACAG GCGTTTGACGAGCGG Smed_3974 425997 - 425341 - | isochorismatase hydrolase Smed_3975 427026 - 426118 - | helix-turn-helix domain-containing protein Smed_3976 428202 - 427192 - | helix-turn-helix domain-containing protein Smed_3977 429192 - 428287 - | helix-turn-helix domain-containing protein TERM 294 428544 - 428522 - G 83 -16.2 -2.87132 | TCCCGCTTGGACAGA CCGGCCGCGG CGG CCGCGGCCGC AAACGAGAAGTCTTC Smed_3979 429562 - 430386 + | catalase TERM 295 430461 - 430424 - f 95 -19.3 -2.62184 | opp_overlap 430428 430431, overlap 430428 430431 CGCCGGCTCATACGA TCAAGAAGGAGGGAGGC GCCC ACCTCCCTCCTTCTTGT GCGGCGATGTGGTTG TERM 296 430428 - 430457 + F 93 -18 -3.29829 | opp_overlap 430424 430428 430431, overlap 430431 GGCTCATACGATCAA GAAGGAGGGAGG CGCCCA CCTCCCTCCTTC TTGTGCGGCGATGTG TERM 297 430457 - 430428 - f 100 -18.7 -3.24747 | opp_overlap 430428 430431, overlap 430424 430431 GGCTCATACGATCAA GAAGGAGGGAGGC GCCC ACCTCCCTCCTTC TTGTGCGGCGATGTG TERM 298 430431 - 430454 + F 93 -13.9 -3.79113 | opp_overlap 430428 430424 430431, overlap 430428 TCATACGATCAAGAA GGAGGGAGG CGCCCA CCTCCCTCC TTCTTGTGCGGCGAT TERM 299 430454 - 430431 - f 95 -14.6 -3.76482 | opp_overlap 430431 430428, overlap 430428 430424 TCATACGATCAAGAA GGAGGGAGGC GCCC ACCTCCCTCC TTCTTGTGCGGCGAT Smed_3980 430576 - 431637 + | hypothetical protein TERM 300 432270 - 432237 - g 78 -15.3 -2.73875 | gap 1, opp_overlap 432250, overlap 432234 GTTCGCGGAACACGA GGCGATTGCCGACGCC ATC GCCGCCGGCAA-CGCC GAAGACGCTCGCATA Smed_3981 431641 - 432342 + | GntR domain-containing protein TERM 301 432347 - 432393 + T 79 -13.4 -3.03441 | gap 1, overlap 432349 CCTCGCAGTAGTCTG GATCACGATGTTTTTCAGG CGGGATTGGC CCTGAA-AACATCGTGATC TATTCCAAAGTGCTG TERM 302 432432 - 432443 + T 80 -2.2 -5.23316 | overlap 432423 432423 432430 CCGTTTCGTGCCTGG CAGG TGTG TCTG TTTTTTCATGTCATC Smed_3982 433863 - 432757 - | iron-containing alcohol dehydrogenase TERM 303 432984 - 432998 + g 72 -4.2 -4.56597 | opp_overlap 432950 CGAGGCCAAGCGCAT CGGC GACCTCG GCCG TTTTTGCGGAGACGA Smed_3983 434825 - 433860 - | 4-hydroxythreonine-4-phosphate dehydrogenase Smed_3984 436018 - 434822 - | hypothetical protein Smed_3985 436358 - 437857 + | extracellular solute-binding protein Smed_3986 437990 - 438904 + | binding-protein-dependent transport systems inner membrane component Smed_3987 438918 - 439841 + | binding-protein-dependent transport systems inner membrane component Smed_3988 439834 - 441477 + | ABC transporter related TERM 304 442078 - 442126 + G 70 -12.4 -3.21772 | opp_overlap 442070 442071, overlap 442072 442063 442076 442076 TGCAGAATGGCGCCG CCGGC-TGCATTTCCGGCCTCGGC AAT GCC-ATGCCGGACGTGCTTGCCGG TATTCTGAGCGCATT TERM 305 442269 - 442291 + G 71 -9.1 -3.72576 | gap 1 CTGCAGGATTCCTCC GTCGGC-GCC TCCC GGCAGCCGGC TTTGCTCCCGAACGA Smed_3989 441477 - 442367 + | dihydrodipicolinate synthetase Smed_3990 443644 - 442397 - | monooxygenase FAD-binding TERM 306 442521 - 442495 - G 77 -13 -3.61398 | overlap 442496 CGCGCCGGGGAAGAA GCGGCACATTGC GCC GCAATGCGCCGG GCAACCTCGTGACGA TERM 307 442520 - 442496 - G 81 -16.5 -2.76696 | overlap 442495 GCGCCGGGGAAGAAG CGGCACATTGC GCC GCAATGCGCCG GGCAACCTCGTGACG TERM 308 443008 - 442985 - G 76 -7.4 -4.32857 | overlap 442987 442990 CGGCCGAAACAGAAA TATAACGGCG GCGT CGCCGCTATG ACGAATCGGAAAGAC TERM 309 443006 - 442987 - G 74 -10 -3.76586 | overlap 442985 442990 GCCGAAACAGAAATA TAACGGCG GCGT CGCCGCTA TGACGAATCGGAAAG TERM 310 443003 - 442990 - G 76 -9.5 -3.99432 | overlap 442987 442985 GAAACAGAAATATAA CGGCG GCGT CGCCG CTATGACGAATCGGA Smed_3991 443809 - 444924 + | secretion protein HlyD family protein TERM 311 445872 - 445885 + G 74 -9.5 -3.84648 | GTACTCGATTTTCCA CCCGC TTAT GCGGG TTTCGTCCTCTTGCC Smed_3992 444921 - 446582 + | EmrB/QacA family drug resistance transporter Smed_3993 446560 - 447726 + | putative adenylate/guanylate cyclase Smed_3994 448453 - 447776 - | TetR family transcriptional regulator Smed_3995 449088 - 448573 - | hypothetical protein Smed_3996 449998 - 449108 - | beta-lactamase domain-containing protein Smed_3997 450483 - 451409 + | amidohydrolase 2 Smed_3998 451449 - 452381 + | amidohydrolase 2 TERM 312 453853 - 453869 + G 79 -9.3 -4.21974 | CGCCAGGATCGACGA CGCCGCC TTC GGCCGCG TTTCTTCGATCCTGG Smed_3999 452531 - 453904 + | UbiD family decarboxylase Smed_4000 453934 - 454566 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Smed_4001 454646 - 456037 + | uracil-xanthine permease TERM 313 456083 - 456119 + T 76 -12.2 -3.33412 | gap 1, opp_overlap 456077 456076, overlap 456080 456084 GTGCGAAAGCGCGAC ATGCACCGCCCC-GGCG ATAT CACCTGGGGCGGTGCGA TCTTATGTAGCGTTG TERM 314 456084 - 456118 + T 84 -15.7 -2.59565 | gap 1, opp_overlap 456077 456076, overlap 456083 456080 TGCGAAAGCGCGACA TGCACCGCCCC-GGCG ATAT CACCTGGGGCGGTGCG ATCTTATGTAGCGTT TERM 315 456199 - 456226 + T 100 -21.4 -4.81083 | opp_overlap 456199 CAAGGACAAAGGAAA TCCGCCGAAGCC TCCC GGCTTCGGCGGA TTTTTCGTCATTCCC TERM 316 456226 - 456199 - T 100 -21.4 -4.17789 | opp_overlap 456199 CAAGGACAAAGGAAA TCCGCCGAAGCC TCCC GGCTTCGGCGGA TTTTTCGTCATTCCC Smed_4002 457288 - 456248 - | cobalamin synthesis protein P47K Smed_4003 459606 - 457288 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Smed_4004 460088 - 459603 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Smed_4005 460948 - 460085 - | molybdopterin dehydrogenase FAD-binding Smed_4006 461780 - 461001 - | GntR family transcriptional regulator TERM 317 461239 - 461218 - G 71 -13.7 -2.57564 | gap 1, opp_overlap 461208, overlap 461217 TGATTGCCGCAGAAG CGCGGCTCGG TTT CCG-GCCGCG ACCAGGACAGGAGCG TERM 318 461778 - 461766 - G 74 -4.7 -4.58395 | CTGACTCCTGAAAAA GGGCG ACA CGGCC ATAGGAACTCTCTCC Smed_4007 462221 - 463519 + | amidohydrolase 3 Smed_4008 463573 - 464556 + | basic membrane lipoprotein TERM 319 464625 - 464582 - f 71 -8.2 -4.07687 | gap 3, overlap 464585 ATTCCGGTGCGAAAA GGATG--GTCAGGACCCGGCG AACCG CGCCGGGTCC-GCCGGCACCC CGGGATGCTCCCATC Smed_4009 464717 - 465814 + | inner-membrane translocator Smed_4010 465823 - 466755 + | inner-membrane translocator TERM 320 467487 - 467442 - g 72 -7.6 -4.11216 | opp_overlap 467482, overlap 467451 467455 TCCGCACCGTGAAAA CCTCCGA-AACCAATGCGCGCG AACT CGCGCGCAT-GATGGTCGGCAG AGACGTTCTGATGGA TERM 321 467477 - 467451 - g 73 -10.9 -3.60818 | gap 1, overlap 467442 467455 TGAAAACCTCCGAAA CCAATGCGCGCG AACT CGCGCGCAT-GA TGGTCGGCAGAGACG TERM 322 467474 - 467455 - g 83 -15 -3.51976 | overlap 467451 467442 AACCTCCGAAACCAA TGCGCGCG AACT CGCGCGCA TGATGGTCGGCAGAG TERM 323 468017 - 467998 - g 79 -8.6 -4.3534 | gap 1 CGGCAACCAGCAAAA GCTCGTCGT CGG ACG-CGAGC TGGACCGCCGCTTCG Smed_4011 466766 - 468292 + | ABC transporter related Smed_4012 468423 - 469319 + | LysR family transcriptional regulator Smed_4013 470272 - 469325 - | ribokinase-like domain-containing protein TERM 324 470181 - 470157 - G 82 -14.3 -3.29144 | GTATTCGTCGCAGAA CCGCCCAGAAA CAT CCTCTGGGCGG TCGCGATCGCCTCTC Smed_4014 471484 - 470282 - | cystathionine gamma-synthase Smed_4015 472363 - 471527 - | binding-protein-dependent transport systems inner membrane component Smed_4016 473268 - 472360 - | binding-protein-dependent transport systems inner membrane component Smed_4017 474601 - 473294 - | extracellular solute-binding protein Smed_4018 474685 - 475539 + | RpiR family transcriptional regulator Smed_4019 475540 - 476235 + | N-(5'phosphoribosyl)anthranilate isomerase (PRAI) TERM 325 476253 - 476239 - f 73 -12.8 -2.76671 | overlap 476238 AGAGCGACCTGAAAC CGGGGG CGT CCCCCG CCCGGCCGATGTCGC TERM 326 477059 - 477021 - g 86 -13.1 -4.07885 | gap 1, overlap 477022 477044 477045 TATCTCGCCGGAAAA GCGGCCCGACCGTGCGAT CGAA ATCGC-CGCCCGGGCCGG CATGCCGTTGAAAAT TERM 327 477058 - 477022 - g 84 -16.6 -3.04517 | gap 1, overlap 477021 477044 477045 ATCTCGCCGGAAAAG CGGCCCGACCGTGCGAT CGAA ATCGC-CGCCCGGGCCG GCATGCCGTTGAAAA TERM 328 477264 - 477294 + G 77 -13.2 -3.65351 | TCTGGTGATGATCGA GGCGATGGCCTGCG GCA CGCCGGTGATCGCC TTTCGCTGCGGCTCG Smed_4020 476548 - 477567 + | glycosyl transferase group 1 TERM 329 477831 - 477811 - g 77 -12.6 -3.56643 | opp_overlap 477813 477822 TCCAGATCCCTGAAA CACGGCGA TACCT TCGCCGTG TTCGACCATAACGGC Smed_4021 477697 - 479901 + | Amylo-alpha-16-glucosidase Smed_4022 480030 - 481751 + | dihydroxy-acid dehydratase Smed_4023 481779 - 482504 + | hypothetical protein Smed_4024 482507 - 483439 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Smed_4025 484393 - 483569 - | hypothetical protein TERM 330 483875 - 483857 - G 70 -12.4 -3.23984 | CAAAGCGAGGAGGAA GGCGACGG GAA CCGTCACC AGGAGATTCAGCCAG Smed_4026 486075 - 484435 - | ABC transporter related Smed_4027 487019 - 486072 - | binding-protein-dependent transport systems inner membrane component TERM 331 486715 - 486695 - G 86 -5.3 -5.1101 | overlap 486698 486699 TCACGACCGAAAAAA GCACGGCGC AGA ACGCGATGC CGATGGTGTTTTGCG Smed_4028 487939 - 487016 - | binding-protein-dependent transport systems inner membrane component TERM 332 487140 - 487162 + g 70 -10.6 -3.57144 | opp_overlap 487134 AGCGCGAAATCGCGC CTCACGATCG CGT CGATCATGAG TTTACCGATGCCGGG Smed_4029 489520 - 488012 - | extracellular solute-binding protein Smed_4030 490606 - 489650 - | hypothetical protein Smed_4031 491405 - 490674 - | GntR domain-containing protein Smed_4032 491508 - 492212 + | GntR family transcriptional regulator TERM 333 492230 - 492216 - T 81 -12.8 -3.62522 | opp_overlap 492220 GAACTGGGGTAAGAA GCCCGG GAG CCGGGC GGAGCAACGAACGGC TERM 334 492275 - 492300 + T 83 -14.7 -3.04144 | CAGCCGTGTTTCAGA TGCCAGCCGGA TTTC TCCGGCCGGCA TCTTGCAGGTCAGGC Smed_4033 494112 - 492310 - | putative monooxygenase protein TERM 335 492780 - 492820 + g 72 -7.3 -4.11216 | opp_overlap 492780 492814 GATACTTCATGAAAA GGCCGGATCCGTCCGCGCC CCA GTCGAGCATGAAGCCGGCC TTTTCGAGATCGGCA TERM 336 492820 - 492780 - G 76 -7.3 -4.27617 | opp_overlap 492780, overlap 492814 GATACTTCATGAAAA GGCCGGATCCGTCCGCGCC CCA GTCGAGCATGAAGCCGGCC TTTTCGAGATCGGCA Smed_4034 495254 - 494181 - | alcohol dehydrogenase Smed_4035 497301 - 495427 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 337 496156 - 496104 - G 86 -12.1 -4.14739 | gap 1, opp_overlap 496120 GCAGGTAGCCGAAAA GCTCGCTCTCGATCAATTGCTCGG GGATCG CCGCGCAGTTGATCGCGA-CGAAC TGCCCCTTCAGACCG Smed_4036 498672 - 497461 - | hypothetical protein Smed_4037 499769 - 498798 - | putative dehydrogenase protein TERM 338 499133 - 499182 + g 74 -9.2 -3.86346 | gap 2, opp_overlap 499132 CCTGAAGGCAGAGAG GCTTGCCGTCGCCGCCGCCGCGCC TGAA GGC-CT-CGGCAATGGCGGCAAGC TTTGTCGACGACTGA TERM 339 499229 - 499243 + g 77 -12.8 -3.57561 | CGTCCGCCCATTCTC CGGCCG TTT CGGCCG TTTCAGGCGTTAGAG Smed_4038 501405 - 499771 - | alpha amylase catalytic region Smed_4039 501797 - 501405 - | hypothetical protein Smed_4040 503035 - 501806 - | FAD linked oxidase domain-containing protein TERM 340 501897 - 501885 - G 73 -3.4 -4.68103 | overlap 501889 CGAAGGGCAAGAAAA CGAT CCCAC ATCG GGTAGAGGGCCTTGA TERM 341 502990 - 503000 + g 86 -6.8 -5.09426 | ACCAGTTGTGGCAAT CCTG GTC CAGG TTTTTTGAGGTTGCA Smed_4041 503414 - 503037 - | hypothetical protein Smed_4042 505338 - 503521 - | thiamine pyrophosphate binding domain-containing protein TERM 342 503589 - 503626 + g 73 -2.8 -4.77719 | gap 3, overlap 503610 503612 503615 GTGCCTGCGGCTCCT CCTCGGTGACTTTCCTGCC TGC GG-AGGAATG-C-CTGAGG TTTTCTTCGATTTTC TERM 343 506669 - 506689 + Gr 78 -6.1 -4.60041 | overlap 506668 506667 ATGATCCATTCCAAG GTGGTCG CGATCGA CGACCGC TTTTTCCGGGTCGGT TERM 344 506996 - 507010 + Gr 74 -7 -4.36914 | opp_overlap 506985, overlap 506997 ATCATCGATCCGCAG CGGCCG ATC CGGCCC TTTTATCGCACGCAC Smed_4044 507990 - 507049 - | hypothetical protein Smed_4043 505436 - 507154 + | phospholipase D/transphosphatidylase TERM 345 508531 - 508513 - g 72 -2.2 -4.68593 | opp_overlap 508502, overlap 508502 TGGAGCAGGGAAAAA CCCGCTTG ATT CTGGCAGG AGATCTCAATGCAAC Smed_4045 508050 - 508778 + | endonuclease/exonuclease/phosphatase TERM 346 508864 - 508838 - T 100 -15.1 -4.2558 | CATGCCGCACGAAAA CGCCGCGGACC TTCCG GGTGCGCGGCG CCGGCACTTCCGCCG Smed_4046 509408 - 508902 - | hypothetical protein Smed_4047 509738 - 510073 + | hypothetical protein Smed_4048 512130 - 510148 - | protein-L-isoaspartate O-methyltransferase Smed_4049 512834 - 512283 - | hypothetical protein TERM 347 512414 - 512424 + g 71 -8.2 -3.87815 | GGAACGATATATCGA CCGC ATT GCGG TTTCTCAGAATACCA TERM 348 512701 - 512675 - G 71 -5.6 -4.26076 | opp_overlap 512683 CCAGGCCCATCAAAA GCCCCGTCGCGC CGG GCACGGCGCCGC CGCTCGTATAGCGCT Smed_4050 513280 - 513026 - | hypothetical protein TERM 349 513186 - 513199 + g 71 -8.1 -3.87583 | overlap 513176 CCCTTCTCGGTTGCA CCTGC GACC GCAGG TTTGGGTTTCAGTTT Smed_4051 513420 - 513593 + | hypothetical protein Smed_4052 513604 - 513885 + | hypothetical protein TERM 350 513867 - 513901 + T 77 -12 -3.55622 | opp_overlap 513857, overlap 513868 GACAACTGGGCGCTC ACGCCCCAGGCGCAGT TGA GCTGCGCCTCGGTCGA TTTCGACGACTTCAC TERM 351 513868 - 513900 + T 83 -15.5 -2.73159 | opp_overlap 513857, overlap 513867 ACAACTGGGCGCTCA CGCCCCAGGCGCAGT TGA GCTGCGCCTCGGTCG ATTTCGACGACTTCA TERM 352 514318 - 514299 - T 100 -16.4 -3.80893 | AGGGGACAAGTGAAA GGGCGGCC CGCG GGCCGCCC GGAATTGCAGGCAAT Smed_4054 514648 - 514409 - | hypothetical protein TERM 353 515544 - 515597 + G 73 -8.1 -4.08216 | gap 1 ACATCCTGAACTTCC GCTGGATCTATCCCTCGGAGCGGGAC AAG GTTCCGCTCTGGCTGGTGGA-CGAGC TTTTGAGCCGGCTGG Smed_4055 514949 - 515764 + | hypothetical protein Smed_4056 515764 - 516474 + | metallophosphoesterase Smed_4057 517819 - 516518 - | alcohol dehydrogenase TERM 354 517745 - 517726 - G 100 -5.7 -5.42605 | gap 1 GGAAGAAAAAGAAAA GGACG-GC GCTCT GCTCGTCC TTCACATTCCTCCAA Smed_4058 521068 - 517850 - | hemolysin-type calcium-binding region TERM 355 518104 - 518092 - G 70 -10.5 -3.61232 | overlap 518075 518090 TCTTCGACAGAAAGA GCCGG TCT CCGGC GGTAAAATCCAGAAC Smed_4059 522362 - 521724 - | two component LuxR family transcriptional regulator Smed_4060 524017 - 522359 - | integral membrane sensor signal transduction histidine kinase TERM 356 523092 - 523069 - G 74 -5.8 -4.49389 | AGCTTATAACGAAAA CGCGGCCCCG GTAA CGGAGGCTCG AAAAGGCCGCGGAAA Smed_4061 525165 - 524152 - | short chain dehydrogenase Smed_4062 525432 - 525241 - | hypothetical protein Smed_4063 525720 - 525478 - | hypothetical protein Smed_4064 525933 - 526790 + | short-chain dehydrogenase/reductase SDR TERM 357 526891 - 526918 + F 90 -11.6 -4.2679 | opp_overlap 526891 526902 GATCTGCTGTCCAAA TCAATATGAAAT GAAA ATTTCATATTGA TTTTCATCGGAATTC TERM 358 526918 - 526891 - f 74 -11.6 -3.53224 | opp_overlap 526891, overlap 526902 GATCTGCTGTCCAAA TCAATATGAAAT GAAA ATTTCATATTGA TTTTCATCGGAATTC Smed_4065 526996 - 527913 + | periplasmic binding protein/LacI transcriptional regulator TERM 359 528714 - 528747 + G 79 -15.3 -2.87211 | GTTCATGGGCCTCAC GGTCGCGATCGTCAC GGGC GTGCCGATCGGGACC TATATCGGCCAGGCT Smed_4066 528304 - 529494 + | major facilitator transporter TERM 360 530391 - 530422 + G 72 -8 -4.18018 | gap 1 CTTCCCCTACTCGGT GGGACTTGCCGCGGT CGG ACTGCT-CGAGTCCC TTTTGACTGCGCAAA Smed_4067 529696 - 531204 + | sulphate transporter TERM 361 531215 - 531242 + F 79 -12.7 -3.45768 | ATTGAATTTCGCCGT CCCCGGGTTGA ATCGGA TCATCCCGGGG TTATAAGTTCTCATC TERM 362 532005 - 532024 + G 71 -9.2 -3.72576 | overlap 532000 532006 TTCTGGTTCGCGCTC TCCGGCGT GCTT GCGCCGGG TTTCATCGCCACGAC Smed_4068 531330 - 532559 + | major facilitator transporter Smed_4069 532780 - 532571 - | hypothetical protein TERM 363 533520 - 533532 + G 71 -4.7 -4.3953 | opp_overlap 533520 533519 AACGAGCCCCAGAAC GACGG CGA CCGCC TTTATTCTCCTTCGC Smed_4070 533031 - 533609 + | intradiol ring-cleavage dioxygenase Smed_4071 533832 - 533647 - | hypothetical protein Smed_4072 534033 - 534797 + | hypothetical protein Smed_4073 534802 - 535206 + | glutathione-dependent formaldehyde-activating GFA Smed_4074 535652 - 535254 - | hypothetical protein TERM 364 536046 - 536082 + r 73 -11.6 -3.33661 | gap 1, opp_overlap 536046, overlap 536044 ATCACAGCGATGAAA GGGCCGCTCC-CAAGCT CTTT ACCTTGTGGAGCGCCCC TGTTCTGCTTGACTA TERM 365 536082 - 536046 - R 78 -11.6 -3.7829 | gap 1, opp_overlap 536046 536044 ATCACAGCGATGAAA GGGCCGCTCC-CAAGCT CTTT ACCTTGTGGAGCGCCCC TGTTCTGCTTGACTA Smed_4075 536784 - 536095 - | isochorismatase hydrolase TERM 366 536643 - 536671 + g 71 -8.1 -3.9461 | opp_overlap 536643 TCGGGACGTTGAAGA TCTTGGCGGCCTT GGC AAGGCCGACGACA TTGTTCTTCAGCACC TERM 367 536846 - 536872 + r 100 -18 -3.86346 | overlap 536848 TGCAAGCCTTCGCCG GTCGGCTGCCTG AGG CAGGCAGCCGTC TTTGTAGGGCCATGG TERM 368 536848 - 536870 + r 100 -19.2 -3.52113 | overlap 536846 CAAGCCTTCGCCGGT CGGCTGCCTG AGG CAGGCAGCCG TCTTTGTAGGGCCAT Smed_4076 537857 - 536925 - | glyoxalase/bleomycin resistance protein/dioxygenase Smed_4077 537976 - 538875 + | LysR family transcriptional regulator Smed_4078 539746 - 538967 - | methyltransferase type 11 Smed_4079 540557 - 539751 - | ABC transporter related Smed_4080 541597 - 540554 - | transport system permease protein Smed_4081 542697 - 541594 - | periplasmic binding protein Smed_4082 543886 - 543503 - | hypothetical protein TERM 369 544126 - 544142 + r 74 -13.7 -2.57721 | opp_overlap 544125, overlap 544123 CAAGGTCCTATAGAT GGGTGCG GAT CGCACCC TAGCTTCGTGCCTTC TERM 370 544198 - 544230 + r 100 -18.5 -3.05463 | TTCAGCGATATCTGG GGCGGGGTTTTGCCA CGA TGGCAGAACCCCTCC TTGGATCGACCGGCT TERM 371 544322 - 544286 - R 88 -13.9 -3.76373 | CTTCGAATATGGAAA TGCGAGTGCCCGCG-CA GGGGA TGACGCGGGCACT-GCA ACAGGTTGGGGTCCT Smed_4083 545402 - 544377 - | AraC family transcriptional regulator TERM 372 544855 - 544822 - G 76 -8.1 -4.11664 | gap 1, overlap 544817 544823 TCGATAAGAAGGAAA CGCCCGGTCTCGACCG TTA CCGTCG-GACCGAACA GACGATCCACGAGGC Smed_4084 545675 - 546379 + | chloride peroxidase TERM 373 546457 - 546489 + F 100 -11.1 -5.18726 | overlap 546458 CCCTCCCGGCGCTCG GCGCCGGCCGATGGC TCG GCCAATGGCAGGCGG TTTTTCTTATAACCA TERM 374 546458 - 546488 + F 95 -14.6 -3.70512 | overlap 546457 CCTCCCGGCGCTCGG CGCCGGCCGATGGC TCG GCCAATGGCAGGCG GTTTTTCTTATAACC Smed_4085 546564 - 546881 + | hypothetical protein TERM 375 546910 - 546956 + T 79 -13.1 -3.33696 | gap 1, opp_overlap 546916, overlap 546913 GGAGCTTCAATTCCG CAACGACCGGAAGCGCGCTGTA CCGA TATGGCGCGCTTC-GGTCAATG TTCGTTGGCCGGCGC TERM 376 546913 - 546953 + T 74 -13.4 -2.54098 | gap 1, opp_overlap 546916, overlap 546910 GCTTCAATTCCGCAA CGACCGGAAGCGCGCTGTA CCGA TATGGCGCGCTTC-GGTCA ATGTTCGTTGGCCGG Smed_4086 548912 - 546951 - | elongation factor G TERM 377 547261 - 547244 - G 83 -7.7 -4.62783 | gap 1, overlap 547246 CATCGACGCGAAAAA CCG-GCTG CAT CAGCACGG AAGCGGCCTGCGACA TERM 378 547540 - 547552 + g 76 -10.5 -3.91911 | ACATCGGCGAATTGG CCGGC CCC GCCGG TTTGCTTGCGATGGC Smed_4087 549584 - 548997 - | UbiC transcription regulator-associated domain-containing protein TERM 379 549699 - 549719 + r 86 -5.3 -5.12068 | opp_overlap 549702 AATTTTCTGATGAAG CGACAGGGG CTG TTCCTGGCG TTTTTCTTCGGTGTA Smed_4088 550085 - 549897 - | hypothetical protein TERM 380 549975 - 549998 + g 79 -11 -3.92869 | gap 1 GCTCGGCGCCGTCTC CCGGCAGGGAG AGA CTTCC-GCCGG TTTATCGATCGCTGC TERM 381 550276 - 550259 - H 81 -3.3 -5.28942 | gap 1, overlap 550261 GAGCGGAAAGAAAAA CAGCCGCG CTC CG-GGCGG CACAATCGGGGTTTT TERM 382 550277 - 550261 - H 83 -9.3 -4.27026 | overlap 550259 GCGGAAAGAAAAACA GCCGCGC TCC GGGCGGC ACAATCGGGGTTTTT Smed_4089 550389 - 551585 + | cobyrinic acid ac-diamide synthase Smed_4090 551589 - 552590 + | parB-like partition protein TERM 383 552643 - 552602 - f 85 -9.6 -4.43213 | gap 1, opp_overlap 552608, overlap 552608 CTGAACAGAGCAAAA GAAAAAGGCTTCCG-AACG ACTAG CGCTGCGGAAACCCTTCTC TCGTGTAGCAACTAG TERM 384 552637 - 552608 - f 95 -7.2 -5.52079 | gap 1, opp_overlap 552608, overlap 552602 AGAGCAAAAGAAAAA GGCTTCCG-AACG ACTAG CGCTGCGGAAACC CTTCTCTCGTGTAGC TERM 385 552704 - 552716 + F 73 -3.4 -4.72188 | overlap 552700 CATTTTTGACGTCGT TTCG GCGAA CGAA TTTCTTTTGCCTTGG Smed_4091 552746 - 554059 + | replication protein C TERM 386 554231 - 554246 + T 79 -6.8 -4.59853 | gap 1 CTTCAGTCGCGGATT CGCGGCG TCG CGC-GCG TTTTTGCCAACTTGG TERM 387 554324 - 554311 - T 78 -3.7 -5.00884 | opp_overlap 554319, overlap 554313 AGCGTTGGCAAAAAA GGCGG CATC CCTCC GATGCGGAAGCTATA Smed_4092 555347 - 554505 - | hypothetical protein TERM 388 554816 - 554784 - G 76 -14.1 -3.24386 | overlap 554803 AAAATGCAGGACGAA GCGCCGGGGGAAG AATTTAG CTCCGCCCGGCGC ATTGCGCGTTACGAA Smed_4093 555788 - 556936 + | hypothetical protein Smed_4094 557487 - 556957 - | hypothetical protein Smed_4095 558514 - 557654 - | hypothetical protein TERM 389 558795 - 558811 + G 72 -12.3 -3.33696 | opp_overlap 558790 GGCCTATGAACGCCT TCAGGCC GAA GGCCTGA TTCGTTCGCGGCCGG TERM 390 558823 - 558833 + G 86 -8.2 -4.65895 | overlap 558818 CTGATTCGTTCGCGG CCGG GCT CCGG TTTTTACGTAGCGGC Smed_4096 558595 - 560019 + | GntR family transcriptional regulator Smed_4097 560251 - 561489 + | hypothetical protein TERM 391 561509 - 561534 + T 100 -17.7 -3.82097 | opp_overlap 561515 AGCGGCCGCCGCCGA TACGAAGCCGC CGCG GCGGCTTCGTA TTTCGTGCATTTAGG Smed_4098 562413 - 561556 - | RNA polymerase sigma factor SigJ Smed_4099 562886 - 562413 - | alkylhydroperoxidase Smed_4100 563383 - 563000 - | MerR family transcriptional regulator Smed_4101 563462 - 564277 + | hypothetical protein TERM 392 564323 - 564351 + T 90 -16.8 -3.32963 | gap 1 AGCTCCATATGCGCC GCGCTGCCACAGG TTTT CC-GTGGCAGCGC TTCTCGACTACACCT Smed_4102 565871 - 564366 - | hypothetical protein TERM 393 565571 - 565529 - G 80 -16.3 -2.63501 | gap 2, opp_overlap 565527, overlap 565526 565525 565521 CGAAGAACGAACCGA GCGCCGCAATCGCCAGCGCCG CGC CGGCGC-GGCCCTTGCG-CGC CATCTGGTAGCCGTC TERM 394 565837 - 565814 - G 73 -3.6 -4.79352 | overlap 565815 TCAGGCAGAAGAAAA GGTTCGCCGG TGAG CCGGCGGTCG CGAAGCCGAGGGCAA TERM 395 565986 - 565942 - R 83 -7.8 -4.66833 | overlap 565943 565978 GGGTAATTTTAAAAA GCCAGGTCGTTACCCTGTGT AAATA AAACAGGGAAACGGCCTAGA ACCGGGTCCACGGGC TERM 396 565985 - 565943 - R 73 -11.3 -3.39618 | overlap 565942 565978 GGTAATTTTAAAAAG CCAGGTCGTTACCCTGTGT AAATA AAACAGGGAAACGGCCTAG AACCGGGTCCACGGG Smed_4103 566443 - 565982 - | hypothetical protein Smed_4104 567626 - 566649 - | hypothetical protein TERM 397 566727 - 566745 + g 71 -13.8 -2.52896 | CTTCGCCTTCAGTGC CGCCGGCG TGG CGTCGGCG TCGCTTGACGGCTCG Smed_4105 568754 - 567972 - | pseudouridine synthase TERM 398 568461 - 568488 + g 75 -12 -3.63515 | gap 1 CCGACCCTCCGGATC GTCGCGGGTGGTT ACG AGCC-CCCGCGGC TTGTTCAGCATCAGA TERM 399 568671 - 568703 + g 76 -13.3 -3.48593 | overlap 568672 GCCGAGCTTCGAGAG CGCGCGGGCGAGCGT CAC GCGCTTTCCCGCTCG TTCTCTCCCGCCATC TERM 400 568929 - 568894 - H 100 -8.9 -5.24129 | overlap 568896 GCGGCCCATAAAAAA CGC-CGACGCCGCGCCG GATC CGGC-CGGCGAAGTGCG GAGGAACTGAATATG TERM 401 571271 - 571254 - g 70 -7.7 -4.09685 | gap 1 TGCCATCCGCGAAAA CCCGG-TG ATC CATCCGGG CGACGTGTTCCTGAT Smed_4106 568942 - 572580 + | 5-oxoprolinase (ATP-hydrolyzing) Smed_4107 573177 - 572611 - | dienelactone hydrolase TERM 402 572992 - 572941 - G 76 -8.7 -4.18197 | gap 3, opp_overlap 572980 572981 AGCGCCCATCGAAAA GC-CGCCGAGAACGGCA-TCGGCAGG CAG CCCGGCGACCGCC-CGCTCGGCGCGC TCGCAAAGAGCGCGC TERM 403 572980 - 573014 + g 89 -11.3 -4.34737 | opp_overlap 572941, overlap 572981 CAGCCCGGCGACCGC CCGCTCGGCGCGCTC GCAAA GAGCGCGCCAACCGA TTTCTTCCTTGATGG TERM 404 572981 - 573013 + g 80 -14.8 -3.20119 | opp_overlap 572941, overlap 572980 AGCCCGGCGACCGCC CGCTCGGCGCGCTC GCAAA GAGCGCGCCAACCG ATTTCTTCCTTGATG Smed_4108 573784 - 573413 - | hypothetical protein TERM 405 573579 - 573566 - G 74 -9.5 -3.87318 | overlap 573567 AATTATTACAGGAAA GGCCG GATT CGGCC GGCGCGTCTCAACCT Smed_4109 574296 - 573829 - | AsnC family transcriptional regulator TERM 406 574462 - 574440 - g 78 -6.8 -4.65895 | overlap 574441 574443 574456 GGCCGCACTTAAAAA GGACCGGCGC AAC GCACCGGACG AGAACATCGACTGGA TERM 407 576019 - 576030 + G 72 -4.4 -4.56597 | opp_overlap 576018 576019 576021, overlap 576000 GCATTGCGGGGAAAC GATC CGGT GATC TTTTTCGAACACCGG Smed_4110 574417 - 576495 + | transketolase domain-containing protein TERM 408 576815 - 576845 + G 71 -13.3 -3.01712 | gap 1 ATGGCTTCGATCCTG CGACCATCACCGGC ACCG GCCGG-GATGGCCG TGTTACGCGCGGCGA Smed_4111 576499 - 577659 + | dihydrolipoyllysine-residue succinyltransferase Smed_4112 577735 - 578757 + | putative sugar ABC transporter periplasmic sugar-binding protein ABC transporter Smed_4113 578954 - 580510 + | ABC transporter related TERM 409 580915 - 580945 + G 74 -4.6 -4.57073 | overlap 580893 580919 580920 GGCCCTGCGGCTGCA GGCGATTGTCGCGA CTT TCGCGACGAGTATC TTTTTCACCGGCCTC TERM 410 580975 - 581003 + G 91 -12.4 -4.37092 | gap 1, overlap 580999 CGCGCTCTACATCCT GC-CCGTTGCCGG TACG CCGGCACCGGCGC TTTTCTGGCGCGCCT TERM 411 581008 - 581029 + G 78 -6.5 -4.60041 | gap 1, overlap 580999 581024 GGCACCGGCGCTTTT CTGGCGCGCC TAT GGTG-GCCGG TTTTTCGGCGTGCCT Smed_4114 580511 - 581503 + | monosaccharide-transporting ATPase Smed_4115 581500 - 582456 + | monosaccharide-transporting ATPase TERM 412 582536 - 582567 + G 80 -14.4 -3.16564 | gap 1, overlap 582556 CGCGCTTGCAGATTC CGCGCTGGTGACGGC CGA GACG-CGCCAGCGCG TTCATGACCTGGCGC TERM 413 582917 - 582963 + G 73 -11.4 -3.64703 | opp_overlap 582929 GGGCCTGCCCCATGT TCAGGTCGACAACGTCGCCGCG GCA CGCGGTGCCGTCGAGCACCTGA TTTCGCTCGGGCACC TERM 414 583113 - 583140 + G 74 -6.2 -4.51196 | gap 1, overlap 583112 583115 GGTGACTTCCTCATC GAGAGCGGCGAGC GAT GCT-GCCGGTCGC TTTTCTCGCTTTCCG TERM 415 583339 - 583356 + G 77 -12.7 -3.66018 | GGGCCGAGATCGGCC GCACCGC CATG GCGGTGC TTCTTGGAATACTGG Smed_4116 582453 - 583457 + | alanine racemase Smed_4117 583514 - 584758 + | oxidoreductase domain-containing protein Smed_4119 585913 - 585614 - | hypothetical protein TERM 416 586845 - 586829 - g 75 -13.7 -3.01712 | TCTCCCTGCCCAAGA GCCTGGC CAA GCCAGGC GCATGGATGCAGACC TERM 417 587117 - 587105 - g 91 -9.1 -4.39828 | overlap 587107 AACAGGCTGAGAAAA GGCTG GCG CAGCC GCTCGAGCGCGGAAA TERM 418 588218 - 588232 + G 76 -7.8 -4.25104 | overlap 588200 TCAACTTTCCGTGGA CGCTTG TCG CGAGCG TTTTGCTGGGGGCAG Smed_4120 586006 - 588549 + | vitamin K epoxide reductase Smed_4121 589360 - 588581 - | zinc/iron permease TERM 419 588742 - 588732 - G 86 -8.2 -4.66938 | overlap 588733 588734 ATCGCGAACAGAAAA CCGG TGA CCGG CTGCGCCAGCCCCTT ligC 590461 - 589394 - | ATP-dependent DNA ligase Smed_4123 592604 - 590487 - | catalase Smed_4124 593749 - 592829 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Smed_4125 594553 - 593942 - | glutathione S-transferase domain-containing protein TERM 420 595501 - 595516 + G 70 -11.8 -3.25088 | AGGCCGCATGGTCTC GGCGCG CGTG CGCGCC TTCGTGGATTTCGCC Smed_4126 594671 - 595576 + | LysR family transcriptional regulator Smed_4127 596359 - 595583 - | pyrroline-5-carboxylate reductase TERM 421 596071 - 596097 + g 78 -12.3 -3.76413 | gap 1, overlap 596064 GGAGCCTCGTGCGGT CGGTCG-CGGCG ATGA CGCTGACGACCG TTTGACCTTTTCGGA Smed_4128 596763 - 597104 + | hypothetical protein TERM 422 597334 - 597366 + T 76 -6.8 -4.4959 | overlap 597331 CGGTTCGCCAGTGAG TCTGGCGCCCGGAG ACTGG CGCCCGGCGCTCGA TTTTGCTTCCTTGGG TERM 423 597590 - 597562 - T 73 -11.7 -3.11732 | gap 1, overlap 597557 TTGAAATTGATGCAA GC-CGGCCCGCA ATGAGA CGCGGGCCGAGC AGATTCAGACATCAA Smed_4129 597778 - 597614 - | hypothetical protein groEL 599485 - 597851 - | chaperonin GroEL TERM 424 598283 - 598232 - G 73 -11 -3.67597 | gap 4, opp_overlap 598247 TTTCGCACGCAACAA CGCCACGCCGCCGCCGGCAA-CGATG CCTT CCTCGACTGCC-GCG-CGG-GTGGCG TTCAGGGCATCGTCG TERM 425 599737 - 599749 + r 76 -6.9 -4.41494 | GACGGCGATCACTTC GCCCT GCT GGGGC TTTTCCTTGGCGGTG Smed_4132 601180 - 600107 - | ABC transporter related TERM 426 600174 - 600200 + g 74 -9.3 -3.89354 | opp_overlap 600163 600162, overlap 600163 AAACGGGCAGCGAGG CGGTCGCCGGC CTTTA GTCCGCGGCCG TTCTTCGTTTCGACG Smed_4133 603441 - 601177 - | glycoside hydrolase family protein TERM 427 601360 - 601317 - G 71 -13.1 -3.01791 | gap 1 AGCCGCCTTGGAAGA CGAGGCGCGTAGGACCGACG ACCCG CGCCGGACC-ATGCACCTCG ATAGCCACGGCATCG Smed_4134 604265 - 603450 - | binding-protein-dependent transport systems inner membrane component TERM 428 604214 - 604203 - G 70 -7.2 -4.08939 | GAAGATGGACAGAAA GGCC ATCA GGCC GAGAAAGCCATAGGT Smed_4135 605161 - 604262 - | binding-protein-dependent transport systems inner membrane component TERM 429 605086 - 605074 - G 71 -6.2 -4.34345 | GATAGATCATGAAAA GGGC GATCA GCCC AAGGGCCGGTGCAAC Smed_4136 606521 - 605247 - | extracellular solute-binding protein TERM 430 605468 - 605439 - G 70 -9.9 -3.61398 | gap 1 CTCGCCGCCGAAGAA GGGGTCTGCGGCCT CGT AGGCCGC-GCCGCC GCGGGCAGCGAGCAG Smed_4137 607833 - 606754 - | regulatory protein LacI Smed_4138 608837 - 607902 - | AraC family transcriptional regulator Smed_4139 609032 - 610504 + | glycoside hydrolase family protein Smed_4140 610706 - 612787 + | extracellular solute-binding protein TERM 431 613216 - 613188 - g 89 -14.5 -3.84406 | CCTCTATTACAACAA GCCGGTCGCCGAC GTC GTCGGCGAGCGTC TGCCGCGCACGCTGG Smed_4141 612904 - 613917 + | binding-protein-dependent transport systems inner membrane component TERM 432 614003 - 613967 - g 76 -7.3 -4.28361 | gap 1 CGAACCCGAGGAAAA GCACCACCACGAGAGC TACTCC GCACTCGT-ATGGCGC CGATTGAAGCGCTCC Smed_4142 613914 - 615041 + | binding-protein-dependent transport systems inner membrane component TERM 433 615386 - 615368 - g 78 -11.6 -3.68024 | opp_overlap 615363 615362 615356 TTTTCGAAGAGAGAA CGCCGGGC GTT GCGCGGCG ATCGCATTTCAATGA TERM 434 615954 - 615985 + G 78 -6.6 -4.56597 | gap 1, overlap 615955 TCGACGGCAGAAACG TCCGCGTCTCCTTCA CCT TGAAGAAGG-GCGGG TTTTTCAGGCCGGAA TERM 435 616192 - 616177 - g 82 -6.1 -4.9218 | overlap 616179 GATCCACGACAAAAA CCGCA AGGCGA TGCGG CCGCTTCGCTCGAAG Smed_4143 615053 - 616723 + | ABC transporter related Smed_4144 616757 - 618130 + | glycoside hydrolase family protein TERM 436 618153 - 618192 + F 100 -19.2 -3.88985 | opp_overlap 618119 618115 618174 TCCCGGTCAGGCGAC CGGAACGGCCCCGGAACC GAAC GGTCCCGGGGCCGTCACG TTTCTACAGCCTTTT Smed_4145 618508 - 618852 + | hypothetical protein TERM 437 619010 - 619053 + F 100 -31.2 -4.39386 | opp_overlap 619012, overlap 619012 AGGTTCGAGGCAGTT AACGACAGCGCCGCGCGTCT TATC AGACGCGCGGCGCTGTCGTG TTTTGATCGTTTGCG TERM 438 619012 - 619051 + F 100 -33.8 -3.79533 | opp_overlap 619012, overlap 619010 GTTCGAGGCAGTTAA CGACAGCGCCGCGCGTCT TATC AGACGCGCGGCGCTGTCG TGTTTTGATCGTTTG TERM 439 619051 - 619012 - f 100 -33.8 -3.07816 | opp_overlap 619012 619010 GTTCGAGGCAGTTAA CGACAGCGCCGCGCGTCT TATC AGACGCGCGGCGCTGTCG TGTTTTGATCGTTTG Smed_4146 619137 - 620054 + | PaaX family transcriptional regulator Smed_4147 620238 - 621239 + | phenylacetate-CoA oxygenase subunit PaaA Smed_4148 621257 - 621541 + | phenylacetate-CoA oxygenase subunit PaaB TERM 440 621967 - 621956 - g 71 -5.8 -4.37886 | overlap 621966 CGATCGCCGAGAAAA CCTC GAAG GAGG TGGCCTATCACCTCG TERM 441 622220 - 622210 - g 73 -8.2 -4.08767 | opp_overlap 622209 GCTACGCTCGGAAAA CCGC AGG GCGG CTATATGCACAGGGG Smed_4149 621541 - 622326 + | phenylacetate-CoA oxygenase, PaaI subunit Smed_4150 622336 - 622860 + | phenylacetate-CoA oxygenase, PaaJ subunit TERM 442 622932 - 622980 + G 89 -14.5 -3.84451 | opp_overlap 622916, overlap 622953 TCCGGCGCGAGACGC GCGATGCGGTCGTCGTCACGC TCGAGCC GCGCGATGAGGACCGCGCCGC TTTCGATTTCACGCA Smed_4151 622883 - 623959 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit TERM 443 624318 - 624332 + G 82 -3.5 -5.14965 | gap 1 GGATCGACATCGAAG GCG-GC ATCG GCACGC TTTTTTCCTACGCCT Smed_4152 623999 - 626059 + | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase Smed_4153 626056 - 626559 + | thioesterase superfamily protein Smed_4154 627409 - 626618 - | enoyl-CoA hydratase TERM 444 627255 - 627228 - G 74 -5.4 -4.62069 | gap 1, overlap 627229 TGGCCAGCGGAAAAA CCGCGC-CCGGCC CCG GTCAGGAGCACGG CCCGCACGTCATCGT TERM 445 627821 - 627789 - g 73 -8.9 -4.07885 | GACGGCGCGGTAAAA CGCCGCCGCATCTCC GCC GGGCTTGCGGCGGAG CGCTTGGCCCGCGTC TERM 446 628343 - 628377 + G 82 -11.3 -4.0896 | gap 1, overlap 628346 628347 CGATATCGCCGCCTT CCAGCGGCGCGC-CGC CCGG GCGCGCGGGCTGCCGG TTTTCGCGCCGGTTT Smed_4155 627501 - 628829 + | 3-hydroxybutyryl-CoA epimerase Smed_4156 628974 - 630071 + | carboxynorspermidine decarboxylase Smed_4157 630112 - 631353 + | saccharopine dehydrogenase TERM 447 631461 - 631407 - g 75 -2.8 -4.87786 | gap 4, opp_overlap 631459 GGAAGCGGAGAAAAA CACCCACTTCGAATTGTGGCGGGTCCCC TGC GGGG-CCCGTCACTG-CCG-AG-GGGCG GATTCGCAAAGATCT Smed_4158 631356 - 632606 + | alanine racemase Smed_4159 632630 - 633895 + | extracellular solute-binding protein Smed_4160 634021 - 634938 + | binding-protein-dependent transport systems inner membrane component TERM 448 635000 - 635040 + G 72 -2.5 -4.79683 | gap 1, opp_overlap 634984, overlap 635027 CGCCTATCACGGTAT CGGCATAGGCGCGGCG TTCTTCTTCC TGGCGC-CCTTTGCCG TTTCTTTTCTCGCTT TERM 449 635300 - 635276 - g 72 -4.2 -4.56597 | TTTTCCCTTCAAAAA TGCGCTGTTC GTGCT GATCATCGCA ACGCTGATGATCCCG Smed_4161 634935 - 635798 + | binding-protein-dependent transport systems inner membrane component TERM 450 636815 - 636840 + G 73 -6.7 -4.36914 | CGACACCGCCTATGC CGAGACCTGCG CCTC CGTCGGCCTCG TTTTCTGGGCGAGCC Smed_4162 635817 - 637739 + | hypothetical protein Smed_4163 637752 - 638837 + | ABC transporter related Smed_4164 639976 - 639077 - | chromosome replication initiation inhibitor protein TERM 451 639932 - 639904 - G 72 -12.4 -3.31144 | GCGTCACGTTGAGAA GGCCGGCAGCCT TTTCG AAGCTGCCGGTC TGAACGACCGCCGAG Smed_4165 640071 - 640682 + | lysine exporter protein LysE/YggA Smed_4166 640761 - 641399 + | lysine exporter protein LysE/YggA TERM 452 641463 - 641474 + G 72 -7.2 -4.18018 | overlap 641460 ATGACCTTGTTTGCC GGCC TTGC GGCC TTTTCCATAACGCCA TERM 453 641589 - 641600 + G 81 -7.2 -4.41616 | overlap 641561 641559 CTCCTCGGGAGCACG GGCG GCTA CGCC TTTCTTTCGCGGCGT TERM 454 641984 - 642005 + G 72 -4.3 -4.57474 | TGAGCTCGCGCGCAT GCGTTCGCG CATC CCCGAAGGC TTTTCTATCGGTTAC Smed_4167 641448 - 642338 + | dihydrodipicolinate synthetase Smed_4168 643339 - 642350 - | helix-turn-helix domain-containing protein TERM 455 642582 - 642557 - G 74 -14.7 -2.52676 | gap 1, opp_overlap 642569 CACTTGCGCAAGGTA GCG-GGCCGGCG TCT CGCCGACCACGC TGGCGAATTGCTGAG TERM 456 642692 - 642726 + g 72 -13.5 -2.74192 | gap 1, overlap 642690 CGCGATGACCCGGCC GAGGCCGGGGTGGCGG ACCG CCGCCACC-CAGCCGC TGGTATTGCCGCATC TERM 457 643947 - 643957 + G 72 -2.4 -4.72272 | GCGATCTCTGGGGTT GGCG CGC CGCA TTTTTGATGGCCGCG Smed_4169 643415 - 644620 + | major facilitator transporter thiE 645492 - 644887 - | thiamine-phosphate pyrophosphorylase thiG 646262 - 645489 - | thiazole synthase Smed_4172 646462 - 646265 - | sulfur carrier protein ThiS TERM 458 646315 - 646336 + gr 75 -9.4 -3.86015 | gap 1 GATCGCTGTCCTGCA GCCG-GCGG TCGGC CCGCTCGGC TTTCTGGACAAGCTC Smed_4173 647435 - 646431 - | glycine oxidase ThiO TERM 459 647077 - 647046 - GR 87 -12.9 -3.90744 | CTCGTCCGGAAAGAA CAGCGCCTGCCGG AAGCGG CCGGCGAGCGCCG GTTCCAGCGCCCCGA Smed_4174 649269 - 647437 - | thiamine biosynthesis protein ThiC TERM 460 647973 - 647963 - G 71 -8.2 -3.86897 | opp_overlap 647964 647966, overlap 647964 CCCAGCGTGTAGAAA GGCG CTT CGCC GCAAACGGCAAGCTG TERM 461 649726 - 649706 - g 76 -8.1 -4.1585 | opp_overlap 649706, overlap 649707 CCAGAACCGGGAAAA GGGCGGCGC TTT GGGCCGCCG TCGCGTTGATTGCAA TERM 462 650650 - 650628 - g 100 -8.5 -5.34555 | gap 1, overlap 650642 CGACATGACAAAAAA GGCCGA-CAT CGAA ATGCTCGGCC TGAACATGGAGGTGC Smed_4175 649675 - 651678 + | hypothetical protein Smed_4176 653178 - 651820 - | two component, sigma54 specific, Fis family transcriptional regulator Smed_4177 655044 - 653182 - | histidine kinase TERM 463 653813 - 653845 + g 73 -10.7 -3.64703 | gap 2 ATCTCATGGGCGACG CCGGCT-GCGA-CCT GGCCG AGGATCGCCAGCCGG TTTGCCTGGACGAGG Smed_4178 655239 - 656603 + | C4-dicarboxylate transporter DctA TERM 464 656643 - 656670 + T 100 -16.3 -4.07687 | ACGCTGGTGCGGTTG GCGCGGTCTGG TTTTCT CCAGGCCGCGC TTTTGCGGGCCGCCT Smed_4179 657625 - 656696 - | response regulator receiver protein TERM 465 657126 - 657096 - G 74 -13.2 -3.29142 | overlap 657094 657092 657097 GCGACGAAGAAGAGA CCGTCGTCGCTGCC CGT GGCAGCGTTGACGA GGCGGGTCGCCTGCG TERM 466 657125 - 657097 - G 74 -14.5 -2.57003 | overlap 657096 657094 657092 CGACGAAGAAGAGAC CGTCGTCGCTGCC CGT GGCAGCGTTGACG AGGCGGGTCGCCTGC TERM 467 657442 - 657419 - G 75 -11.8 -3.60792 | gap 1 CGCGCAAGTGTCAAA GCCGTCCATGC CGG GCATG-ACGGC GTCGAGCAGGATGAT Smed_4180 660992 - 657612 - | integral membrane sensor hybrid histidine kinase TERM 468 660867 - 660892 + g 74 -13.2 -3.38046 | opp_overlap 660867 660866 660883, overlap 660865 660886 CGCCGTCTGTGAAAT GCGCGCGGAG GAGAAG CGCCGCGCGC TCTTTGCGGTAAAGC Smed_4181 661427 - 661765 + | regulatory protein ArsR Smed_4182 661797 - 662261 + | activator of Hsp90 ATPase 1 family protein Smed_4183 662258 - 662707 + | glutathione-dependent formaldehyde-activating GFA Smed_4184 662918 - 664210 + | ABC transporter periplasmic solute-binding protein precursor TERM 469 665265 - 665286 + G 93 -7.2 -5.06414 | CTTCGAGTGGTCACT GGCGATCG CGCTGC CGCTCGCC TTTTTATTCACCGGC Smed_4185 664348 - 665961 + | inner-membrane translocator Smed_4186 665958 - 667124 + | inner-membrane translocator TERM 470 667298 - 667275 - g 76 -8.2 -4.18197 | overlap 667293 ACGGCGCAGGCAAAA CGACGATGAT GGAC ATCATCACCG GCAAGACGAGGCCGG Smed_4187 667130 - 667882 + | ABC transporter related Smed_4188 667901 - 668596 + | ABC transporter related TERM 471 668725 - 668709 - f 84 -3.7 -5.24129 | opp_overlap 668709 CGGCCGCAGAAAAAA TCCAC CTCTTTT GTGGA TTGCGTTTGCTCGTA Smed_4189 668964 - 669359 + | hypothetical protein TERM 472 669376 - 669416 + T 100 -14.7 -5.77853 | opp_overlap 669374, overlap 669377 669378 TCGACCTGACAATGG TACGCCCCTCTCCTTGG ACTAAAC CCGAGGAGGGGGGCGCG TTTTTTTTGGCGATT TERM 473 669377 - 669415 + T 100 -16 -4.05085 | opp_overlap 669374, overlap 669376 669378 CGACCTGACAATGGT ACGCCCCTCTCCTTGG ACTAAAC CCGAGGAGGGGGGCGC GTTTTTTTTGGCGAT TERM 474 669378 - 669414 + T 100 -19.5 -3.01966 | opp_overlap 669374, overlap 669377 669376 GACCTGACAATGGTA CGCCCCTCTCCTTGG ACTAAAC CCGAGGAGGGGGGCG CGTTTTTTTTGGCGA Smed_4190 670527 - 669451 - | parB-like partition protein Smed_4191 671793 - 670531 - | cobyrinic acid ac-diamide synthase TERM 475 671614 - 671639 + g 71 -6 -4.26076 | GATCAGCTTGGCCGC CTCGCCGGAG GTGAAG CTCCGGAGCG TTTTCCTCGCAGTGG TERM 476 671935 - 671947 + r 72 -4.8 -4.59109 | GATTCATCCTCTGAT TCGG GTCAA CCGA TTTTTCGGGGCTCTA Smed_4192 672814 - 672152 - | ErfK/YbiS/YcfS/YnhG family protein Smed_4193 673987 - 672893 - | hypothetical protein TERM 477 673603 - 673613 + g 77 -2.4 -5.06414 | overlap 673592 673600 CTTCCGGCGCCTGCC GGTC ACC GTCC TTTTTCTTCGGACCA TERM 478 674860 - 674834 - g 83 -14.4 -3.53012 | opp_overlap 674832, overlap 674802 CGTCCCCGGCGGAAA CGGACGCGCCGT CGT ACAGCCCGTCCG AATTGCTCCGCGTGC TERM 479 674970 - 674931 - g 90 -2.1 -5.41746 | overlap 674918 674932 674933 674944 674945 AACGCCGGAAAAAAA TGCCGTC-GAACAAGCGGC CGAA GCTGCC-GTCCTGACGGAA GAAGAGCCCTCCATT TERM 480 675064 - 675044 - g 73 -12.5 -3.18264 | overlap 675018 TTGCGGACGCATCAA CGGGCACCG CCG CTGTGCCCG ACAGCGCCGGAGCGG TERM 481 675532 - 675514 - g 79 -13.8 -3.51232 | overlap 675510 GTGCCCGCAAAGGAA CCGGCGCC CGA AGCGCCGG TGACCAGGGCGGCAA Smed_4194 674323 - 677178 + | cell divisionFtsK/SpoIIIE Smed_4195 677602 - 677285 - | blue (type1) copper domain-containing protein Smed_4196 678135 - 677611 - | hypothetical protein Smed_4197 678885 - 678214 - | RNA polymerase sigma factor TERM 482 679081 - 679046 - H 87 -15.5 -3.34398 | overlap 679050 GCGTCGCTTGAAAGA GAAAGCCCGGCGC GGGAGGAGGT GCGCCGGGCTTCC GATCCTGACCGGCAA TERM 483 679077 - 679050 - H 93 -12.7 -4.32857 | overlap 679046 CGCTTGAAAGAGAAA GCCCGGCGC GGGAGGAGGT GCGCCGGGC TTCCGATCCTGACCG TERM 484 679184 - 679170 - H 77 -10 -3.93719 | opp_overlap 679170 ACAATCAGATAATAA TGCTGC GGT GCAGCA TCTTCAAGGCCGGGA TERM 485 679245 - 679228 - H 70 -2 -4.82901 | gap 1, overlap 679230 TTCGTCCGATAAAAA CACGATG TGCGG CATCG-G CGTCATGCGTAAGGT Smed_4198 679315 - 679599 + | acylphosphatase TERM 486 679755 - 679741 - T 87 -12.8 -3.85817 | opp_overlap 679741 ACTGCTGGTCACAAA CCCGGC CGC GCCGGG TCTGTCGTGCGGGGG TERM 487 679741 - 679755 + T 74 -12.8 -2.94099 | opp_overlap 679741 ACTGCTGGTCACAAA CCCGGC CGC GCCGGG TCTGTCGTGCGGGGG TERM 488 679768 - 679782 + T 72 -9.2 -3.68073 | overlap 679761 GGGTCTGTCGTGCGG GGGCGC TGC GCGTCC TTCTTGCGTCCGCTC Smed_4199 681556 - 679796 - | gamma-glutamyltransferase TERM 489 681022 - 681050 + g 73 -13.1 -3.15758 | opp_overlap 681013 AGTCAATGTCGCCCT GCTCGAGCACGAA CCC TTCGCGCGCGAGC TTGATGGCCGGTTCT Smed_4200 682329 - 681667 - | oxidoreductase molybdopterin binding Smed_4201 683309 - 682428 - | helix-turn-helix domain-containing protein Smed_4202 683419 - 684591 + | 4-hydroxybenzoate 3-monooxygenase Smed_4203 684697 - 685617 + | LysR family transcriptional regulator TERM 490 685823 - 685801 - g 83 -12.6 -3.85817 | opp_overlap 685800 ACTCTTTCGGAGAAA CTCGCCGCCG TCG CGGCGGCAGG CTTCGACGGGGTGGA TERM 491 687404 - 687425 + G 73 -6.5 -4.37092 | opp_overlap 687403 687398, overlap 687405 687406 ATGATGACATCGAAG TGCGGTTCG CGCT CGAACCGGG TTTTGTCGACAGGCT Smed_4204 685750 - 687639 + | xylose isomerase domain-containing protein Smed_4205 688615 - 687665 - | LysR family transcriptional regulator Smed_4206 688701 - 689507 + | 3-oxoadipate enol-lactonase Smed_4207 689504 - 689911 + | 4-carboxymuconolactone decarboxylase TERM 492 689962 - 689979 + G 78 -3.3 -5.00616 | gap 1, opp_overlap 689963 689972, overlap 689963 689963 GGCGGAGAGAACGAC AG-GCCCG AAA CGGGCGCC TTTTTTGCCCGGGAC TERM 493 690214 - 690255 + G 93 -18.8 -3.28791 | GTCCATGGGCGGGTG CTCGACGAGCGCGGCC GCCCGGTCCA GGACGCGCTCGTCGAG TTCTGGCAGGCGAAT Smed_4208 689929 - 690690 + | protocatechuate 3,4-dioxygenase, beta subunit Smed_4209 690701 - 691315 + | protocatechuate 3,4-dioxygenase, alpha subunit TERM 494 691352 - 691316 - f 74 -13.6 -2.69151 | opp_overlap 691334 691344, overlap 691313 TTCCTGGATATATGA TCGTTCGGCAGCCCGG TCCCT CCGCGCTGCCGCACGC GTGTGAGGCTTCCTT TERM 495 692255 - 692243 - g 71 -4.7 -4.48987 | GTCGCACAAGCAAAA CCCGG TCG CCGCG GAGGTGCTGGTGACA Smed_4210 691401 - 692456 + | 3-carboxy-cis,cis-muconate cycloisomerase Smed_4211 695163 - 692536 - | malto-oligosyltrehalose synthase TERM 496 693474 - 693492 + g 71 -8.1 -3.8647 | gap 1 TGACGTAGAGCCGCG CGCGGGCG TCCT CGCCC-CG TTTGGTGTCGTGCGT TERM 497 695727 - 695739 + G 76 -6.2 -4.57073 | GGAGCACCAGATGCG GCCG CTGTT CGGC TTTTTCGAAGCCCTG Smed_4212 695344 - 695901 + | NADPH-dependent FMN reductase Smed_4213 695936 - 697285 + | putative nitrilotriacetate monooxygenase component A protein Smed_4214 697302 - 698147 + | binding-protein-dependent transport systems inner membrane component Smed_4215 698195 - 699187 + | NMT1/THI5-like domain-containing protein Smed_4216 699198 - 699968 + | ABC transporter related TERM 498 700061 - 700025 - f 88 -16.7 -3.01712 | overlap 700028 CTTGCTCTGCGAACA GTATCCTCGGGCCTGAC CGG ATCAAGCCCGAGGATAA CGAGGGAAGGACGCC TERM 499 700058 - 700028 - f 100 -18.4 -2.73875 | overlap 700025 GCTCTGCGAACAGTA TCCTCGGGCCTGAC CGG ATCAAGCCCGAGGA TAACGAGGGAAGGAC Smed_4217 700245 - 701417 + | extracellular ligand-binding receptor Smed_4218 701534 - 702397 + | inner-membrane translocator TERM 500 702868 - 702887 + G 75 -4.2 -4.7416 | overlap 702860 CAGCGATGGATTGGC GGGCATCG CGCC CGATCCTC TTTTTGGAATTTTCG Smed_4219 702398 - 703405 + | inner-membrane translocator Smed_4220 703402 - 704166 + | ABC transporter related Smed_4221 704147 - 704872 + | ABC transporter related Smed_4222 705664 - 704900 - | GntR family transcriptional regulator pdxA 705785 - 706831 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 501 706841 - 706807 - f 89 -6.3 -5.08088 | gap 1, opp_overlap 706806 706807 AATGGCGAAGAAAAA GCGGGCG-CTTCCGGC GGCT GCCTGAATTCGCACGC TTTCGATGAATACCG Smed_4224 706907 - 707893 + | hypothetical protein Smed_4225 708000 - 708500 + | hypothetical protein Smed_4226 708535 - 710073 + | hypothetical protein Smed_4227 710118 - 711059 + | xylose isomerase domain-containing protein TERM 502 712701 - 712675 - g 75 -11.6 -3.57144 | gap 1, opp_overlap 712680 GCGCTGACCCCGAAA CTCGGCC-GCG CGCGGC CGCTGGCCGAG AAGAGCATCGGCCAT Smed_4228 711076 - 712794 + | Glycerone kinase Smed_4229 713451 - 712837 - | hexapaptide repeat-containing transferase Smed_4230 714155 - 713448 - | phosphonate C-P lyase system protein PhnL phnK 714994 - 714218 - | phosphonates transport ATP-binding protein Smed_4232 715884 - 714991 - | phosphonate metabolism PhnJ TERM 503 715671 - 715633 - G 76 -5.9 -4.57073 | gap 1 GACCTTCTGGAAAAA GGCACGGATCGAGACCGC ATTG GTCGTGTCG-TCCGCGCC CTGGTCGATGACCTT TERM 504 715732 - 715759 + g 72 -13.4 -2.71712 | overlap 715731 GGTCACCTGCACGCC GCCCGTGCCCCA GCCA TAGGGCATGGGC ATTTCGCGCGAGGCG Smed_4233 716987 - 715881 - | phosphonate metabolism phnH 717594 - 716992 - | carbon-phosphorus lyase complex subunit TERM 505 717326 - 717369 + g 95 -18.1 -3.53012 | overlap 717327 TTCTTCGTGTCGGTC ACCGCGGCGCCGGTGTGGA AGGCGA TCCACTTCGGCGCTGCGGA TTTGGAGAGCGCCGG TERM 506 717327 - 717368 + g 100 -21.6 -2.71712 | overlap 717326 TCTTCGTGTCGGTCA CCGCGGCGCCGGTGTGGA AGGCGA TCCACTTCGGCGCTGCGG ATTTGGAGAGCGCCG Smed_4235 718079 - 717594 - | phosphonate metabolism PhnG Smed_4236 718194 - 718925 + | GntR family transcriptional regulator Smed_4237 721069 - 718931 - | methylmalonyl-CoA mutase TERM 507 720848 - 720834 - G 79 -11.4 -3.86346 | opp_overlap 720843 TCAGCCGTCGAGAAA CCGGCA TAT TGCCGG ATCGTCCAGGGCCGG Smed_4238 723145 - 721133 - | carbamoyl-phosphate synthase L chain ATP-binding TERM 508 722068 - 722026 - G 75 -14.7 -2.71144 | opp_overlap 722032 TATCGTTGCGAATGA CGGTACCGTCCGCCCGCGG GCCTT CCTCCGGCGGGCGGTAGCG GCTCAGCCGGCCGAT TERM 509 722118 - 722097 - G 75 -4.3 -4.79174 | overlap 722098 ATCGAAGGAAGAAAA TTGCGGTAG GGGT CTTCCGCAT AGAGCCGGCTTTCGA TERM 510 722365 - 722334 - G 74 -5.1 -4.56597 | gap 1, opp_overlap 722353 722360, overlap 722336 GTGCCGGCCGAAAAA TAGGCGACGGC-CT TTGCC AGCGCCACCGCCTG CTCGCCCATGGCGCG TERM 511 722357 - 722336 - G 74 -9.3 -3.90048 | opp_overlap 722353, overlap 722334 GCCGGCCGAAAAATA GGCGACGGC CTTT GCCAGCGCC ACCGCCTGCTCGCCC Smed_4239 724690 - 723158 - | carboxyl transferase TERM 512 723437 - 723454 + g 70 -9.9 -3.53811 | opp_overlap 723439 CGGCCAGGCGTAATT CACATCG GCGC CGATGTG TTTGGACGCCATGAC TERM 513 725729 - 725755 + G 71 -8.6 -3.8709 | overlap 725751 TGGAACTCCTTGCAG CCCGCTTCGGTG CCT CGCTGGAGCAGG TTTGTCACCGGCTTT TERM 514 725793 - 725808 + G 74 -4.6 -4.57073 | GCAGCGGCCCGGGCA GAAGGG CATC CCCATC TTTTTCGCGCGGATC TERM 515 726031 - 726006 - g 91 -18.3 -3.25223 | gap 1, opp_overlap 726006 GACCCAGATCACCAA GGGCGGCGGCGG CTA CCG-CGCCGCCC ATCCCCGTTATGCCT Smed_4240 724843 - 726261 + | hypothetical protein Smed_4241 726483 - 727631 + | acyl-CoA dehydrogenase domain-containing protein Smed_4242 727644 - 728714 + | enoyl-CoA hydratase Smed_4243 728767 - 729663 + | 3-hydroxyisobutyrate dehydrogenase Smed_4244 730434 - 729685 - | short-chain dehydrogenase/reductase SDR TERM 516 730055 - 730029 - G 79 -8.6 -4.26903 | overlap 730032 TCGAGGTCACGAAAA TCAGTCGTCCGG CGG CCGAACGCCGGA GATGCGGCAGCGCGG Smed_4245 731940 - 730480 - | mannitol dehydrogenase domain-containing protein TERM 517 731905 - 731954 + g 75 -4.2 -4.70659 | gap 2 GCTTTTGACGGAGGC GGGCAGGCGGTC-GA-GCGTCTCT TGCG AAAGGCGCATCAGAAGGCCCGCCC TTTTTCGGTATCCGC TERM 518 733471 - 733498 + G 74 -9.8 -3.73224 | gap 1, overlap 733474 GTCTCCGTTGGGCTT CTGCCGCC-GCGC ATG GCGCAGGCGGTAC TTTCGTGGAAGCTCG TERM 519 733474 - 733495 + G 74 -13.7 -2.96695 | gap 1, overlap 733471 TCCGTTGGGCTTCTG CCGCC-GCGC ATG GCGCAGGCGG TACTTTCGTGGAAGC Smed_4246 732514 - 733578 + | glycosyl transferase family protein Smed_4247 734700 - 733651 - | alanine racemase TERM 520 733738 - 733759 + g 78 -5.1 -4.72272 | gap 1, overlap 733739 GCAGGCGATCCGCCT G-TGGACGGG GGG CACGTCCATC TTTTTCATGCGCCGC TERM 521 733739 - 733757 + g 73 -8.8 -3.98256 | overlap 733738 CAGGCGATCCGCCTG TGGACGGG GGG CACGTCCA TCTTTTTCATGCGCC TERM 522 733976 - 733951 - G 70 -13.3 -2.87881 | gap 1 CAAGGTCGCGACATA GGCCGAC-GCGA AGA CCGCAGTCGGCC GGCCGGCCCTTCGGA Smed_4248 735948 - 734923 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 523 735065 - 735055 - G 84 -8.2 -4.50976 | GCCGAGAGCATAAAA CGCG TCG CGCG TGCCGCCGGTCCGGT Smed_4249 736272 - 736946 + | HAD family hydrolase Smed_4250 737150 - 736965 - | hypothetical protein Smed_4251 737657 - 738691 + | glutamate--ammonia ligase TERM 524 738711 - 738736 + F 100 -17.6 -5.55769 | TCTCCCGACTTTTTA TGGCGCCGGC TCGATT GCCGGCGCCA TTTTTTATTGTCCGA Smed_4252 738913 - 741507 + | outer membrane autotransporter Smed_4253 741517 - 742245 + | hypothetical protein Smed_4254 742687 - 742454 - | hypothetical protein TERM 525 742727 - 742692 - R 82 -8.9 -4.4715 | opp_overlap 742719, overlap 742694 742714 TTGCAATGCACAAAA CCTCAGGCCAGCCAT GCAGAG ACGGCAGGCCCGATG GCCGCAGCCGACCGG Smed_4255 744282 - 742765 - | hypothetical protein TERM 526 743257 - 743241 - G 70 -7.9 -4.07885 | opp_overlap 743250, overlap 743244 GATTGGTGGCGAAAA GCAGCGG CCC CGGCTGC AGCCCGTATTGCTGG TERM 527 743472 - 743455 - G 76 -8.3 -4.11404 | TGCATAGGAGAGAAA GGTGCCG ATCT CGGCGCC GCCGGCCGGCATGGC TERM 528 743948 - 743986 + g 73 -11 -3.65046 | overlap 743949 GATCCGATCGCCGCA G-TGGCGAGCGCTGGGCC ACCGC GGCC-GGCGCGCGCCATC TTGTTGCCCTCGAGC TERM 529 743949 - 743984 + g 83 -14.7 -3.40611 | gap 1, overlap 743948 ATCCGATCGCCGCAG TGGCGAGCGCTGGGCC ACCGC GGCC-GGCGCGCGCCA TCTTGTTGCCCTCGA Smed_4256 744788 - 744297 - | putative tricarboxylic transport membrane protein TERM 530 744733 - 744757 + g 83 -14.9 -3.53091 | overlap 744734 744737 744737 ACGACGGCGATGATC AGCGCCGCCCT GTC GGGGCGGCGCG TTTCGACGGAAGGGT TERM 531 744734 - 744756 + g 86 -18.4 -2.71712 | overlap 744733 744737 744737 CGACGGCGATGATCA GCGCCGCCCT GTC GGGGCGGCGC GTTTCGACGGAAGGG Smed_4257 745729 - 744785 - | hypothetical protein Smed_4258 747065 - 745965 - | putative iron ABC transporter periplasmic solute-binding protein precursor TERM 532 746989 - 746967 - G 83 -7.7 -4.58395 | gap 1, overlap 746968 GGGAGCCGGGAAAAA CGCCGGCGCA GCCT TG-GCCAGCG CGGCCGACAGAATCA Smed_4259 747110 - 747787 + | two component transcriptional regulator Smed_4260 747784 - 749178 + | integral membrane sensor signal transduction histidine kinase TERM 533 749216 - 749253 + T 85 -15.5 -3.15999 | opp_overlap 749220, overlap 749218 749220 TCTAGAATGTAGAAT CAAACGGCCTGCCCCGG AAAC CCGCGGCAGGCCGTATC TTCACTATCTCCGAC TERM 534 749218 - 749251 + T 100 -18.1 -3.14125 | opp_overlap 749220, overlap 749216 749220 TAGAATGTAGAATCA AACGGCCTGCCCCGG AAAC CCGCGGCAGGCCGTA TCTTCACTATCTCCG TERM 535 749249 - 749220 - T 100 -20.7 -4.01939 | opp_overlap 749218 749216 749220 GAATGTAGAATCAAA CGGCCTGCCCCGG AAAC CCGCGGCAGGCCG TATCTTCACTATCTC TERM 536 749220 - 749249 + T 100 -20.7 -3.12856 | opp_overlap 749220, overlap 749218 749216 GAATGTAGAATCAAA CGGCCTGCCCCGG AAAC CCGCGGCAGGCCG TATCTTCACTATCTC Smed_4261 750225 - 749275 - | putative sugar uptake ABC transporter periplasmic solute-binding protein precursor TERM 537 750051 - 750067 + g 74 -12.3 -3.53444 | CGTTGAGGCCCGGAT GCTGCTC CAT GAGCAGC TTTGCGACGCGCTCG Smed_4262 751303 - 750293 - | monosaccharide-transporting ATPase Smed_4263 752906 - 751380 - | ABC transporter related TERM 538 752982 - 752948 - H 74 -13.9 -2.67705 | opp_overlap 752954, overlap 752954 CGACAATGGAGACGA TGTAAACCTTTACAC CCGCT ATGTAAAGGTTTACA TCGGGACATACACAG TERM 539 753843 - 753877 + G 100 -18.6 -4.2558 | overlap 753845 753854 CCAGGAGGGCGACGG CACGCTCGAGAGCGGC AGG GCCGCTGTCGAGCGTC TTTTCGTGCGCGATA TERM 540 753845 - 753875 + G 100 -21.2 -3.73042 | overlap 753843 753854 AGGAGGGCGACGGCA CGCTCGAGAGCGGC AGG GCCGCTGTCGAGCG TCTTTTCGTGCGCGA Smed_4264 753175 - 754206 + | alanine racemase Smed_4265 754465 - 754241 - | hypothetical protein TERM 541 754543 - 754516 - R 100 -10.6 -4.87592 | overlap 754517 TGACAGATAAGAAAA TGCCGGGATAAA CTTC TTCATCCCGGCC AGTCGCTCTGCTGGG TERM 542 754542 - 754517 - R 88 -14.1 -3.5147 | overlap 754516 GACAGATAAGAAAAT GCCGGGATAAA CTTC TTCATCCCGGC CAGTCGCTCTGCTGG Smed_4266 755598 - 754573 - | monosaccharide-transporting ATPase Smed_4267 757237 - 755696 - | ABC transporter related TERM 543 757341 - 757372 + r 90 -12.2 -4.18018 | gap 1, overlap 757370 757370 TAGGACGCGCGGGCA TCGAGGGAGCGCGGC AAC GCCACGC-CCCACGA TTTTCACTGAAGCCC TERM 544 757370 - 757425 + r 80 -14.2 -2.79289 | gap 3, opp_overlap 757384, overlap 757341 757370 757375 CAACGCCACGCCCCA CGATTTTCACTGAAGCCCGGGGCGCGG ATTCA CCGCGCCCCGGGCATC---GAAAATCA GTTCTTCGCCTGATA TERM 545 757370 - 757426 + r 88 -14 -3.66018 | gap 4, opp_overlap 757384, overlap 757341 757370 757375 CAACGCCACGCCCCA C-GATTTTCACTGAAGCCCGGGGCGCGG ATTCA CCGCGCCCCGGGCATC---GAAAATCAG TTCTTCGCCTGATAC TERM 546 757375 - 757422 + r 87 -17.7 -2.66106 | gap 1, opp_overlap 757384, overlap 757370 757370 CCACGCCCCACGATT TTCACTGAAGCCCGGGGCGCGG ATTCA CCGCGCCCCGGGCATC-GAAAA TCAGTTCTTCGCCTG TERM 547 757414 - 757384 - R 100 -26.9 -3.06302 | opp_overlap 757375 757370 757370 ACGATTTTCACTGAA GCCCGGGGCGCGG ATTCA CCGCGCCCCGGGC ATCGAAAATCAGTTC Smed_4268 758352 - 757423 - | periplasmic binding protein/LacI transcriptional regulator Smed_4269 759404 - 758589 - | xylose isomerase domain-containing protein Smed_4270 760482 - 759595 - | 3-hydroxyisobutyrate dehydrogenase Smed_4271 761086 - 760529 - | 3-methyladenine DNA glycosylase TERM 548 761329 - 761370 + G 75 -11.6 -3.66178 | gap 1, opp_overlap 761322 CTTCGAAACCGCGAG CGGTTGCTG-CGGTATCGC CTGGA GCGATGCCGGCATCATCCG TTTCCAGTTGCCGAC Smed_4272 761297 - 761848 + | methylated-DNA--protein-cysteine methyltransferase Smed_4273 761850 - 763115 + | putative adenylate/guanylate cyclase Smed_4274 764073 - 763297 - | extracellular solute-binding protein Smed_4275 765205 - 764210 - | hypothetical protein TERM 549 764991 - 765005 + g 70 -10 -3.60627 | TGACCGACCGAGTAG GTGGCT ACC AGCCAC TTTCCCATGACGTCG Smed_4276 766745 - 765285 - | glycogen/starch synthase, ADP-glucose type TERM 550 766183 - 766153 - G 71 -8.2 -3.90112 | overlap 766154 CCGCCCTTAAGGAAA CCGATGTCGCCGTA ATA TTCGACGCCATCGA TAGAATAGGCTTCGG TERM 551 766884 - 766869 - H 70 -11.8 -2.79273 | opp_overlap 766867, overlap 766865 766868 TTGTCTGAAGACAAG CGCCGC GTGC GCGGCG GGATTTGCTCCTGTG TERM 552 767069 - 767086 + H 71 -12.7 -2.60496 | overlap 767068 767066 TGGTTCTTCTTGTCT GCCTCGC TTCG GCGAGGC CTCTTTCGCAACACC TERM 553 767624 - 767584 - g 86 -15.3 -3.56568 | opp_overlap 767576, overlap 767585 GAACGATTTCGGAAA TGCCCGTTACGATGGGCCG CAG CCGCCCGTCGGAACGGGCG TCCACCGGTATCGCT TERM 554 767623 - 767585 - g 87 -18.8 -2.73619 | opp_overlap 767576, overlap 767584 AACGATTTCGGAAAT GCCCGTTACGATGGGCCG CAG CCGCCCGTCGGAACGGGC GTCCACCGGTATCGC Smed_4277 767306 - 767767 + | PEBP family protein TERM 555 768681 - 768657 - g 78 -3 -5.04601 | gap 2 GGTATAAATCAAAAA CGT-TTC-TACG CCG CGTAAGAAGACG CATGCAGATTCTTCA TERM 556 769270 - 769286 + G 75 -3 -4.83169 | gap 1 ATTCCATTATGCGCT GA-AGCC GGGT GGCTATC TTTTTCTCGGGACGT TERM 557 769452 - 769422 - g 73 -8.2 -4.07568 | TTGGTCCTCCCAAAA CGGTGAACACTGCC GAT GGCCGTATCCACGG TCTCAGGATCGGCAC Smed_4278 767954 - 771037 + | putative PAS/PAC sensor protein Smed_4279 771047 - 771409 + | response regulator receiver protein Smed_4280 773033 - 771438 - | transcriptional regulator domain-containing protein TERM 558 773255 - 773242 - H 73 -3.1 -4.72272 | opp_overlap 773229, overlap 773243 773247 CCCTTGGACGAAAAA CCAAG CTTC CTTGA AGAGTAATTCAAGCG TERM 559 773739 - 773753 + G 74 -10 -3.71991 | opp_overlap 773737 ATCCCATACACCATC CTGCGT GCC ACGCAG TTCTTCGAATTTGTC Smed_4281 773358 - 774110 + | NmrA family protein TERM 560 774159 - 774132 - f 88 -13.4 -3.72241 | gap 1, overlap 774135 CAGGAAGCATCGAAA CAGGC-CGGCCCG GCA CAGGCCGCGCCCG CGCCACAAGCACTCT Smed_4282 774189 - 774602 + | cupin 2 domain-containing protein TERM 561 774662 - 774622 - f 91 -17.5 -3.17212 | overlap 774623 TTAGGAGGTTATCAA CGCTGCAGCCCTTTCGCAG CCC CTGCGGCAGGGCTGCGGCA ACCGGCACCAACGGG TERM 562 774661 - 774623 - f 95 -18.8 -2.50113 | overlap 774622 TAGGAGGTTATCAAC GCTGCAGCCCTTTCGCAG CCC CTGCGGCAGGGCTGCGGC AACCGGCACCAACGG Smed_4283 774688 - 775785 + | secretion protein HlyD family protein Smed_4284 775782 - 777356 + | major facilitator transporter Smed_4285 777581 - 779398 + | peptidase M20 Smed_4286 779607 - 780854 + | extracellular solute-binding protein Smed_4287 780963 - 781991 + | binding-protein-dependent transport systems inner membrane component Smed_4288 782002 - 782883 + | binding-protein-dependent transport systems inner membrane component TERM 563 783251 - 783227 - g 73 -6.3 -4.30844 | opp_overlap 783238, overlap 783229 ACTGCACCATGAAAA GGTCATGCAGG CCG CCCGCATGGTC GAGCTGGTGGATTTC Smed_4289 782889 - 783953 + | ABC transporter related TERM 564 785068 - 785052 - g 70 -12.3 -3.18264 | TGGGCCACGCACCAA TGTCGCC AAT GGCGACA AGGTCATCGGAACCA Smed_4290 784009 - 785316 + | histidinol dehydrogenase Smed_4291 785300 - 785437 + | hypothetical protein Smed_4292 785434 - 786198 + | short-chain dehydrogenase/reductase SDR TERM 565 786603 - 786636 + G 75 -13.9 -3.02461 | gap 1 TCCTCCGAACTGGCG GCGCGAT-GCCACGCC TCA GGCGTGCCGATCGTGC TGTTCAACCGCCTTC TERM 566 786812 - 786834 + G 76 -10.5 -3.85698 | GGGATTTCGCGAGGG GCTGGAGGC GGCAG GCCTCCCGC TTTCTGCGCGCGAGG Smed_4293 786198 - 787226 + | periplasmic binding protein/LacI transcriptional regulator TERM 567 787333 - 787321 - g 83 -9.1 -4.36595 | opp_overlap 787329 GACGGAAATGGAAAA GCGCA TCG TGCGC TACGGCGAGCTGAAA TERM 568 787831 - 787816 - g 80 -5.4 -4.82667 | gap 1, overlap 787817 CTACGACACCAAAAA GGGCCAG TCA CTG-CCC GATGGCATCAAACCG Smed_4294 787292 - 788263 + | cupin 2 domain-containing protein TERM 569 788375 - 788393 + F 76 -13.1 -3.14931 | AATTGCTCTGGCGAA GGGCGGC AGAGG GCCGCCC TTCATCACCCCTGAG Smed_4295 788446 - 789141 + | hypothetical protein TERM 570 789821 - 789837 + G 73 -11.5 -3.62597 | overlap 789831 CTCCGGCTCGGCAGC GGCCGTC GCC GGCGGCC TTGTTCGCACGTCGG Smed_4296 789336 - 790760 + | amidase TERM 571 791604 - 791621 + G 79 -8.3 -4.27617 | ATGAAGCGCTGGCTT GAGGCCG GTTC CGGCCCC TTTTCGTAACCTATA Smed_4297 790851 - 791630 + | alpha/beta hydrolase fold Smed_4298 791659 - 792837 + | hypothetical protein TERM 572 792967 - 792998 + T 100 -13 -4.42386 | gap 1 CAGGAGGCTATGCGC GTG-GGTGGTCCGGC GAC GCCGGGCGACCACAC TTTTCTGACTCCGCC Smed_4299 793787 - 793014 - | exodeoxyribonuclease III Xth TERM 573 793834 - 793803 - R 100 -20.2 -3.08813 | gap 1, opp_overlap 793794 CGGGAGCTCAAGACA CGAGGCGGCCCGCCC ATC GGGCAG-CCGCCTCG GCCAGCGTCTTCAGG Smed_4300 794436 - 793795 - | hypothetical protein Smed_4301 795523 - 794438 - | TPR repeat-containing protein Smed_4302 796422 - 795523 - | Ku family containing protein TERM 574 796266 - 796294 + g 79 -13.9 -3.41013 | overlap 796248 CGACGAGTCCGAGCT CCGGATCGACAGG CTT CATGTTGATCCGG TTATGCGTGTCCTTG TERM 575 796410 - 796424 + g 74 -5.6 -4.46212 | AGCCTTTCCAACTTG CCCTGG GTG CCATGG TTTTCTCCTACGCGG Smed_4303 798963 - 796510 - | DNA ligase D TERM 576 798881 - 798871 - G 71 -8.2 -3.96148 | CTTGTGCACGACAAA GCGG TTA CCGC CGCCGGAGAGATTCC TERM 577 798898 - 798911 + g 72 -3.7 -4.58395 | overlap 798896 798899 GCCGGAGAGATTCCC GGCCG GCTC CGGCG TTTTTGAAAAATCCC Smed_4304 799873 - 799037 - | hypothetical protein TERM 578 799896 - 799914 + H 72 -8.9 -3.87994 | CTCAACGAAATGCGC GGCGAAA TGGTC TTTCGCC TTTCTGCCCATGACT Smed_4305 800008 - 800892 + | LysR family transcriptional regulator Smed_4306 801139 - 803187 + | hemolysin-type calcium-binding region Smed_4307 804151 - 803330 - | transcriptional regulator IclR TERM 579 803783 - 803770 - G 79 -8.1 -4.34402 | opp_overlap 803770 803770 CCTGGGAGATGAAAA CGACG TCGC CGTCG TCCTCTATGCCGATA TERM 580 806063 - 806046 - g 73 -12.7 -3.15544 | overlap 806025 806024 GTCGAGTTCGAGGAA CTCGCCG AACG CGGCGAG GACGCACCGACCGCG Smed_4308 804315 - 806099 + | glyoxylate carboligase Smed_4309 806129 - 806944 + | hydroxypyruvate isomerase Smed_4310 806950 - 807834 + | 2-hydroxy-3-oxopropionate reductase TERM 581 807887 - 807919 + F 100 -14.1 -4.36914 | overlap 807888 CGCAGCGGTCATGCA TCCGGGCGGCGGA AGGAGGA TCCGTCGCCCGGC TTTTCTCAAACGGGA TERM 582 807888 - 807918 + F 93 -17.6 -3.21934 | overlap 807887 GCAGCGGTCATGCAT CCGGGCGGCGGA AGGAGGA TCCGTCGCCCGG CTTTTCTCAAACGGG TERM 583 808466 - 808441 - g 73 -13.2 -3.14132 | TGTTTCCTTGATCAA GGGCGGCCGC CTGGCC GCTGCCGCCC ATCCCGCCAGGGTCG TERM 584 808731 - 808763 + G 74 -9 -3.88232 | gap 1 CGCTCGAGGCAGCGG CGGCCAAGGC-CCGG GCCG CCGGCGTCGAGGCCG TTATTCTGTCCGACG Smed_4311 807941 - 809209 + | hydroxypyruvate reductase Smed_4312 809257 - 809748 + | ureidoglycolate hydrolase TERM 585 810139 - 810110 - g 74 -4.8 -4.5464 | GACAGAGAAGGAAAA GCCGCCTGAGCC CGACTT GCCTCCGGCCGC TCCGAAGAAGACAGA Smed_4313 809826 - 810779 + | hypothetical protein TERM 586 811482 - 811505 + G 89 -16 -3.53761 | GAAGTCGGGGTCACC GCCTGCTCGC CGGA GCGGGCAGGC TTTGAGGCGAGATTC Smed_4314 810996 - 811571 + | hypothetical protein Smed_4315 812665 - 811607 - | periplasmic binding protein/LacI transcriptional regulator Smed_4316 812837 - 814423 + | ABC transporter related TERM 587 815290 - 815268 - g 73 -11.2 -3.54424 | TGCGATCGGCGGAAA CGAGGAGGCG GCG CGCCTCTCCG GCATCAATGCCGGCC Smed_4317 814420 - 815742 + | monosaccharide-transporting ATPase Smed_4318 815739 - 816707 + | periplasmic binding protein/LacI transcriptional regulator TERM 588 816804 - 816836 + T 95 -7 -5.61881 | gap 1, opp_overlap 816822 GGGGGCATGCAGCGG GGCGGGCGG-C GGATACGAGGGG GACCGCCCGCC TTTTTCTTTTTCGGA Smed_4319 818166 - 816886 - | type III effector Hrp-dependent outers TERM 589 817248 - 817296 + g 72 -2.2 -4.70659 | gap 1, overlap 817266 817280 CATCGGCAATCCGCT CTCCGGCCCAGGCGATGGCGGCG GAAA TGTCGTCCT-GTCCGGCCAGGAG TTTTTCCGTATCGAG Smed_4320 818946 - 818170 - | hydroxypyruvate isomerase Smed_4321 819878 - 818958 - | 3-hydroxyisobutyrate dehydrogenase TERM 590 819946 - 819900 - H 83 -13.8 -3.53012 | CGGGCTCCTTCTAAA GCGTTTTGGCAGCGCTGCCA ACTAAAA TGGTAGCGCTGCCAAAAATC TCCGCCTATGAAGTG Smed_4322 820012 - 821016 + | regulatory protein LacI Smed_4323 821032 - 821709 + | putative aldolase TERM 591 822591 - 822623 + G 75 -14.8 -2.7497 | gap 1, opp_overlap 822564, overlap 822593 CATCGTCGCCGCTTT GCGGCGGCG-CGACC GGGC GGCCGTCGTCGCCGC CTTTCACCATCATCT TERM 592 822593 - 822624 + G 85 -14.5 -3.5882 | opp_overlap 822564, overlap 822591 TCGTCGCCGCTTTGC GGCGGCG-CGACCGG GCGG CCG-TCGTCGCCGCC TTTCACCATCATCTG Smed_4324 821950 - 822732 + | GntR domain-containing protein TERM 593 823068 - 823117 + G 83 -16.3 -2.87344 | gap 1, overlap 823103 GGGTCAATCTCGACG GCACGCGCGC-GCTCTTCGAGGCG ATC CGCCGTGAGGGGCAGCGCGAGCGC TATGTGCCGCGCGTC TERM 594 823269 - 823224 - g 71 -12.5 -3.08464 | opp_overlap 823262, overlap 823231 823232 823261 TGACCAGCTATGGAA CGCAGAAGGCGATCTGCGAGC TGCT GCTCGCAGATTACACCCGGCG GGGTTTCTTCGACGG TERM 595 823337 - 823348 + G 72 -7.2 -4.20817 | opp_overlap 823336 823337 GGAAAACCGAACAAG GCCG CATC CGGC TTCTTTTCCAATATC TERM 596 823435 - 823452 + G 80 -5.5 -4.70887 | gap 1, overlap 823436 CCATTGGTTCGCGAG CCCG-CGC TCG GCGGTGGG TTTCTTTATTCATGC Smed_4325 822767 - 823750 + | NAD-dependent epimerase/dehydratase Smed_4326 823752 - 824528 + | short-chain dehydrogenase/reductase SDR Smed_4327 824612 - 825679 + | ABC transporter related Smed_4328 825769 - 827073 + | extracellular solute-binding protein TERM 597 827102 - 827127 + F 87 -16.1 -2.89564 | AAGGGCCGCCTCTCG ACGCCGGCAGC GAGC GCTGCCGGCGG TCTCTGAAATCGCGC Smed_4329 827174 - 828103 + | binding-protein-dependent transport systems inner membrane component TERM 598 828866 - 828854 - g 79 -9.1 -4.17048 | GTCGTCGGAAAACAA GACCG TAC CGGTC GGCGTGCTGACGGAG Smed_4330 828117 - 829016 + | binding-protein-dependent transport systems inner membrane component Smed_4331 829683 - 829024 - | hypothetical protein TERM 599 829086 - 829073 - G 71 -9.5 -3.80841 | AGGATCACCACGAAA GGCGC CCAG GCGCC GAAATCCTCCATGGC TERM 600 829743 - 829756 + r 70 -2.3 -4.72272 | overlap 829744 TCCACATAGGCGGTC ATGCG CTTG CGCAG TTTTTCGTCCGGCAG Smed_4332 830635 - 829718 - | aldo/keto reductase Smed_4333 831391 - 831086 - | hypothetical protein TERM 601 832536 - 832570 + G 71 -5.8 -4.33928 | overlap 832518 832532 CGCGACCGCATGGGG GTG-CGCCCTCTCTTC CACAC GATGA-AGGGCGGCAC TTTCTATTTCGCATC Smed_4334 832116 - 834053 + | asparagine synthase (glutamine-hydrolyzing) Smed_4335 834081 - 834347 + | hypothetical protein TERM 602 834448 - 834427 - g 78 -6.5 -4.59853 | gap 1, overlap 834405 CGAACGGGGCAAAAA CGGCGCT-GG TCA CCGATCGCCG GCGGCTCAGCTATGC TERM 603 834762 - 834796 + G 91 -17.1 -3.34013 | gap 1 TTCATTGCCTCGGCC GCGGCGCCAGGCGGGC GCAT GCCCGAC-GGTGCCGC TTCCTTCGAGGAATG TERM 604 835256 - 835269 + G 72 -3.7 -4.56597 | overlap 835236 GCCGGCCCATATTGC GCGCC TGAG GGAGC TTTTTCCCGGCGCCC Smed_4336 834375 - 835922 + | AMP-dependent synthetase and ligase TERM 605 836265 - 836275 + G 76 -8.2 -4.1552 | TGGGCTGCTATCAGC GGCG TGA CGCC TTTATTCGCGAACTC nadE 835919 - 836926 + | NAD synthetase TERM 606 836965 - 837013 + T 100 -15.3 -4.25283 | gap 1, opp_overlap 836942 836968 836969, overlap 836967 TCGCGTTCTGAATAT G-AACCCGATCGCACGCCCCGT CTCTGA ACGGGGCGTGCGATCGGCCGGC TTTTACTGAGAGGGT TERM 607 836967 - 837012 + T 88 -16.3 -3.14848 | gap 2, opp_overlap 836942 836968 836969, overlap 836965 GCGTTCTGAATATGA AC--CCGATCGCACGCCCCGT CTCTGA ACGGGGCGTGCGATCGGCCGG CTTTTACTGAGAGGG TERM 608 837009 - 836968 - T 100 -26.7 -3.36273 | opp_overlap 836967 836965, overlap 836942 836969 CGTTCTGAATATGAA CCCGATCGCACGCCCCGTC TCTG AACGGGGCGTGCGATCGGC CGGCTTTTACTGAGA TERM 609 837008 - 836969 - T 100 -30.2 -2.6155 | opp_overlap 836967 836965, overlap 836942 836968 GTTCTGAATATGAAC CCGATCGCACGCCCCGTC TCTG AACGGGGCGTGCGATCGG CCGGCTTTTACTGAG Smed_4338 837315 - 837016 - | hypothetical protein Smed_4339 837793 - 838044 + | hypothetical protein minC 838320 - 839108 + | septum formation inhibitor Smed_4341 839204 - 840019 + | septum site-determining protein MinD TERM 610 840076 - 840042 - g 76 -13.7 -3.14132 | gap 2 CCGTTTTTTCAGCAA GCAGAC-TTC-CGCGCC GAC GGCGCGCGAACGCCTGC AGGTCCTGCTCGCGC minE 840016 - 840279 + | cell division topological specificity factor MinE Smed_4343 840710 - 841183 + | exported protein, glycine-rich Smed_4344 841851 - 841192 - | two component LuxR family transcriptional regulator Smed_4345 843248 - 841848 - | putative signal transduction histidine kinase Smed_4346 843534 - 844274 + | hypothetical protein Smed_4347 844298 - 845098 + | diguanylate phosphodiesterase Smed_4348 845260 - 845991 + | ErfK/YbiS/YcfS/YnhG family protein Smed_4349 847109 - 845994 - | hypothetical protein TERM 611 846324 - 846309 - G 90 -8.2 -4.8667 | overlap 846310 GAGATGGTAGAAAAA CGCGCC GACG GGCGCA CCGCTCCGGGTCTTC Smed_4350 847948 - 847106 - | HemK family modification methylase TERM 612 848327 - 848356 + G 70 -12.9 -2.87564 | gap 1, opp_overlap 848322 GAGCAATGGAGTGCC TCGTGCGG-CGCGT CGC ACGCGACCGTGCGA TCTATCCGCAAATGC TERM 613 848629 - 848682 + G 70 -7.4 -4.0371 | gap 2 ACGGTCGCGGCGGCA CTCGCCTGCATCGCCTTCGGTGCGAC CACC GTCGCATCCTGGGCGGT-CTGGC-AG TTTCTCTGCCACGTC Smed_4351 848098 - 849405 + | polysaccharide biosynthesis protein Smed_4352 849402 - 850550 + | hypothetical protein TERM 614 851255 - 851271 + G 70 -8 -4.07885 | CCCTTCCAATCTCAA CGTCGT AAGCG ACGACG TTTTCACGACCAATC TERM 615 851702 - 851667 - g 71 -13.4 -2.55551 | gap 1, overlap 851679 CAGAACCTGAACGCA CGCCTCGATGA-ACTGC GCC GCAACGTCACCGAGGCG GAAAGGAGGGTTGAG Smed_4353 850833 - 852446 + | lipopolysaccharide biosynthesis protein TERM 616 853027 - 853048 + G 80 -14.5 -3.16668 | opp_overlap 853018 853021 853020 CAAGAACAGCGCCGC GGCTGCGAT GGTG ATCGCAGCC TTCATCGGCCTCTTC TERM 617 853081 - 853109 + G 82 -11.5 -4.00469 | CATGAACGCCTGGTC GCGCGTCGCCGGC ATC GCCATCGTCGCGC TTTCCTTCGTCTTCC Smed_4354 852461 - 853792 + | O-antigen polymerase TERM 618 854502 - 854490 - g 83 -7.7 -4.57073 | TACGCCGTCGAAAAA GGATG CTG CATCC TGAGAGTCGATAGCG Smed_4355 853785 - 854540 + | polysaccharide deacetylase TERM 619 855126 - 855147 + G 91 -9.4 -4.52589 | overlap 855112 TCGGGACAAAGTGGA CCGGTTGG TCGTAC CCAGCCGG TTTTATCTGGAGAAG Smed_4356 854551 - 855780 + | glycosyl transferase group 1 Smed_4357 855905 - 857107 + | glycosyl transferase group 1 Smed_4358 857104 - 857493 + | hypothetical protein TERM 620 857579 - 857568 - g 73 -3.6 -4.79174 | ATTGAATGAAGAAAA GCGA ATTG CCGC GACTATCGAAAGCGC TERM 621 857719 - 857747 + G 100 -17.5 -4.09685 | GTGCCTCCCGCGCGG CCGAGCTGCGG TATCGGC CCGCAGCTCGG TTTTCAGCACTCCCG Smed_4359 857527 - 858525 + | glycosyl transferase family protein TERM 622 858766 - 858790 + G 70 -9.9 -3.55444 | opp_overlap 858752, overlap 858767 TGCTGTGCGCTTCGC TCGCCTGGAGC CCC GCTTCCGGCGG TTTCCCGGATCACGA TERM 623 859895 - 859920 + G 75 -3.1 -4.86731 | gap 1, overlap 859897 TCTGGACCCGGTGGC GCGTGCCG-GCG AGA CGCTCAGCGCAC TTTTGTTTCGCCGCG Smed_4360 858522 - 860681 + | hypothetical protein Smed_4361 863881 - 860684 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein Smed_4362 865005 - 863884 - | RND family efflux transporter MFP subunit Smed_4363 865602 - 865270 - | putative protease Smed_4365 866921 - 867382 + | AsnC family transcriptional regulator TERM 624 868020 - 867989 - g 81 -8 -4.42788 | gap 1 CGCAACGGCAGAAAA GCCGC-GACTTCGAC AAG GCCGAACTCAGCGAC GGTGGCAACATTCAC Smed_4366 867490 - 868068 + | hypothetical protein Smed_4367 868304 - 868834 + | hypothetical protein TERM 625 868835 - 868874 + T 71 -10.5 -3.53012 | opp_overlap 868835, overlap 868840 AACTCGGCGAACTGA CCTTCCTCCGGCGCGGC CATCAC GCCGCGCCGGAGTTCGA TTTCCGCGCCGAGCG TERM 626 868874 - 868835 - T 71 -12.7 -2.52795 | opp_overlap 868835 868840 AACTCGGCGAACTGA CCTTCCTCCGGCGCGGC CATCAC GCCGCGCCGGAGTTCGA TTTCCGCGCCGAGCG TERM 627 868840 - 868869 + T 100 -22.2 -3.27525 | opp_overlap 868835, overlap 868835 GGCGAACTGACCTTC CTCCGGCGCGGC CATCAC GCCGCGCCGGAG TTCGATTTCCGCGCC Smed_4368 869609 - 868854 - | Surfeit locus 1 family protein Smed_4369 870112 - 869711 - | cytochrome o ubiquinol oxidase subunit IV Smed_4370 870741 - 870109 - | cytochrome o ubiquinol oxidase subunit III TERM 628 870165 - 870145 - G 74 -6.1 -4.48333 | ATAGACGAAGGAAAA GACGCCG ATCCAGA CGACGTC GAGGAAGTGCCAGAA Smed_4371 872747 - 870738 - | cytochrome o ubiquinol oxidase subunit I TERM 629 870944 - 870957 + g 76 -5.9 -4.61231 | TTGCCCCGAGGATGA CGCCG GTGC CGGTG TTTTTCGGCATATGG TERM 630 872835 - 872863 + r 83 -9.6 -4.30576 | gap 1, opp_overlap 872829 TTCCAATAAGGTAGA GCGGGATGCGG GCGGAAAA CCGCA-CCCGC TTTTCCTCATCCCGC Smed_4372 874078 - 872900 - | ubiquinol oxidase, subunit II Smed_4373 874380 - 875720 + | general substrate transporter Smed_4374 875900 - 876088 + | hypothetical protein Smed_4375 876477 - 876217 - | hypothetical protein TERM 631 876421 - 876389 - G 78 -2.8 -5.06103 | gap 2, overlap 876390 876391 AGAACGCGGAAAAAA CCGTTGACGAGCGGAT TGC AT-CGCTCGTCGA-GA AGATGCGCAAGGAAG Smed_4376 877050 - 876529 - | ECF subfamily RNA polymerase sigma-24 factor TERM 632 876793 - 876806 + g 75 -4.5 -4.68724 | GGTGCTCCCAGGACT TTCGC GCGT GCGGA TTTTGTATTGCGTGC Smed_4377 877294 - 877578 + | hypothetical protein TERM 633 877828 - 877808 - g 83 -12.5 -3.83026 | opp_overlap 877807, overlap 877822 TGGCGGGAGATCAAA CGGGCCCTC GAA GAGGTCCCG ATCGTTCAGGATCAT Smed_4378 877703 - 877966 + | hypothetical protein Smed_4379 878268 - 878744 + | signal-transduction protein Smed_4380 878738 - 878998 + | hypothetical protein Smed_4381 879352 - 879047 - | hypothetical protein TERM 634 879147 - 879132 - G 78 -10.4 -4.07687 | ACTTCCGCCTGAAAA GCGAGG ACTT CCTCGC GAACGCCGGCCTCAT TERM 635 879604 - 879627 + r 84 -13.1 -3.66908 | opp_overlap 879603 879602 879604 ACGAACAAAATAACG GGCTCCGCC GTCCCA GGCGGGGCC TTCCTTTTCGAAGGG fabG 880469 - 879687 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 636 879831 - 879853 + g 77 -13.5 -3.29142 | overlap 879829 879828 AGGCACCTGTCCGTC CGGCCATTC AACGG GAATGGCCG TCTCTTCTTCGTGGC Smed_4383 880837 - 880466 - | hypothetical protein Smed_4384 881360 - 880905 - | hypothetical protein TERM 637 881310 - 881294 - G 71 -5.7 -4.3534 | opp_overlap 881294, overlap 881295 GGGCAAGGACGAAAA CGGCGGG GCG CCCGGCA TATTCCGCCACCGCG TERM 638 881456 - 881487 + r 74 -10.9 -3.53012 | GGCCGCATGCGGTGC GGGGTTCAGGTCA CGACAT TGACCTGGGCCTC TTTCGCCGCCGCGAC Smed_4385 881709 - 881461 - | hypothetical protein Smed_4386 881968 - 881687 - | hypothetical protein Smed_4387 882529 - 882020 - | hypothetical protein TERM 639 882562 - 882577 + H 77 -7.6 -4.27117 | ATAGGCTTGTGCGCT TTTCCG CTTC CGGAAA TTTCTCTTATGCGAA Smed_4388 882626 - 883723 + | hypothetical protein TERM 640 883761 - 883783 + F 100 -16.3 -5.40072 | opp_overlap 883761 CGCAACGAGAGCAAA GACCCGGCG GGTTA CGCCGGGTC TTTTTTTGCGAGCCC TERM 641 883783 - 883761 - f 100 -16.3 -3.889 | opp_overlap 883761 CGCAACGAGAGCAAA GACCCGGCG GGTTA CGCCGGGTC TTTTTTTGCGAGCCC Smed_4389 883930 - 884256 + | hypothetical protein Smed_4390 884516 - 886264 + | type I secretion system ATPase Smed_4391 886261 - 887577 + | HlyD family type I secretion membrane fusion protein Smed_4392 888367 - 887594 - | GntR family transcriptional regulator TERM 642 888595 - 888612 + G 80 -4.7 -4.85599 | overlap 888597 CCTTGATCGGCGGCG GCGGCGT CCGG GCGCCCC TTTTTGTCGGCTCGG Smed_4393 888570 - 889955 + | glycoside hydrolase family protein TERM 643 890245 - 890265 + G 90 -8.9 -4.8622 | CCATCTCGACAGGCC GCTGCGCCG CGT CAGTGCAGC TTTTTCCTTCGCGCA Smed_4394 889946 - 890905 + | ribokinase-like domain-containing protein TERM 644 890954 - 891002 + G 79 -8.2 -4.25104 | opp_overlap 890985, overlap 890939 890963 890963 GGCAGGTATGACCGT CATTGCCGTCGTATCCGCCTTT CCCGC AAAGGCGGATACCGTTTCGATG TTTTGCTCGGCGACC TERM 645 890963 - 890993 + G 70 -12.7 -2.90387 | opp_overlap 890985, overlap 890939 890963 890954 GACCGTCATTGCCGT CGTATCCGCCTTT CCCGC AAAGGCGGATACC GTTTCGATGTTTTGC TERM 646 890963 - 890994 + G 83 -12.5 -3.85786 | gap 1, opp_overlap 890985, overlap 890939 890954 890963 GACCGTCATTGCCGT CG-TATCCGCCTTT CCCGC AAAGGCGGATACCG TTTCGATGTTTTGCT Smed_4395 890916 - 892178 + | extracellular solute-binding protein TERM 647 892220 - 892176 - f 93 -13.5 -3.85165 | gap 1, overlap 892179 892184 GACGTTAAAGCGAAA TGACGAGAGCGGCGCCCTCG GCCGGT CGGGGGCGCCGCA-TCGACA CGGTGGCGCGGGCCG TERM 648 892217 - 892179 - f 77 -13.8 -3.00017 | gap 1, overlap 892176 892184 GTTAAAGCGAAATGA CGAGAGCGGCGCCCTCG GCCGGT CGGGGGCGCCGCA-TCG ACACGGTGGCGCGGG TERM 649 892213 - 892184 - f 90 -17.8 -2.89608 | overlap 892179 892176 AGCGAAATGACGAGA GCGGCGCCCTCG GCCGGT CGGGGGCGCCGC ATCGACACGGTGGCG TERM 650 893103 - 893117 + G 81 -12.8 -3.68351 | TCGCCCCTTTGGAGA CGGCCG GTG CGGCCG TTTCGATGCTCAGGG Smed_4396 892367 - 893479 + | ABC transporter related Smed_4397 893476 - 894369 + | binding-protein-dependent transport systems inner membrane component Smed_4398 894374 - 895252 + | binding-protein-dependent transport systems inner membrane component Smed_4399 895487 - 895924 + | hypothetical protein Smed_4400 896185 - 897462 + | hypothetical protein Smed_4401 897576 - 897845 + | hypothetical protein Smed_4402 897897 - 898091 + | hypothetical protein Smed_4403 898432 - 898088 - | hypothetical protein Smed_4404 898573 - 898788 + | hypothetical protein Smed_4405 899342 - 898827 - | hypothetical protein TERM 651 898953 - 898908 - G 71 -12.6 -3.09933 | gap 2, opp_overlap 898908 898915 898949, overlap 898890 898889 898903 GTCGAAGCGAGGCAA CGGCACCGCGTCGATCGCGATA CGGT CATC-CG-CCGTCGCGGCGCCG CTTTTGATATCGGCG TERM 652 899214 - 899194 - G 70 -13.3 -2.87132 | opp_overlap 899190 CCGTTGCGCCAGAGA CCGAGCCAA CCA TTGGCCCGG AAGCGTTGTTCGATC Smed_4406 899493 - 900215 + | putative glutathione S-transferase protein Smed_4407 900860 - 900219 - | phage SPO1 DNA polymerase-related protein Smed_4408 902756 - 900951 - | malto-oligosyltrehalose trehalohydrolase TERM 653 901316 - 901301 - G 77 -2.4 -5.03314 | TCGAGCCGGAAAAAA CCTCCG GATC CAGCGG GTCGGGCAGATCCTC TERM 654 902979 - 903012 + G 73 -6.8 -4.33956 | gap 2, overlap 902978 CAGGGGACGCATTTC GC-CG-TCTTCTCGGC GCAT GCGGAGAAGATCGAGC TTTGTCTGTTTTCCG Smed_4409 902901 - 904988 + | glycogen debranching enzyme GlgX TERM 655 905216 - 905204 - g 78 -10.5 -4.07687 | ATCCGTCTGTTAAAA GCCGC ATA GCGGC ACTGGGATTACCGCC Smed_4410 904990 - 906108 + | putative DNA topoisomerase I protein TERM 656 906223 - 906233 + T 71 -6.8 -4.14243 | TTTAGCACAGCTGGC CGCT CGG AGCG TTTTCAACTGAGATC Smed_4411 906971 - 906237 - | transport-associated Smed_4412 907111 - 907302 + | hypothetical protein Smed_4413 907396 - 907704 + | hypothetical protein Smed_4414 907763 - 908203 + | CBS domain-containing protein TERM 657 908263 - 908242 - f 74 -11.5 -3.5764 | opp_overlap 908244, overlap 908244 AAGGGCAGTTCGAAA GAGGGGCGC AGTG GCGCCCCTT TCTGGTTCGGAACAA TERM 658 908261 - 908244 - f 87 -14.1 -3.36515 | opp_overlap 908244, overlap 908242 GGGCAGTTCGAAAGA GGGGCGC AGTG GCGCCCC TTTCTGGTTCGGAAC TERM 659 908244 - 908261 + F 100 -14.1 -4.05446 | opp_overlap 908242 908244 GGGCAGTTCGAAAGA GGGGCGC AGTG GCGCCCC TTTCTGGTTCGGAAC Smed_4415 908292 - 908651 + | hypothetical protein TERM 660 908775 - 908738 - T 100 -20.9 -4.96848 | gap 1, opp_overlap 908736 908752 908765, overlap 908741 GCCTCTAGACAAAAA CAATTCCGGGAAAAGCGT CAC ACGCTTTTCCCGGAAT-G CCATGAGTTCCGGGG TERM 661 908773 - 908741 - T 100 -23.7 -4.58943 | opp_overlap 908736 908752 908765, overlap 908738 TCTAGACAAAAACAA TTCCGGGAAAAGCGT CAC ACGCTTTTCCCGGAA TGCCATGAGTTCCGG Smed_4416 909239 - 908796 - | hypothetical protein TERM 662 909475 - 909448 - R 83 -9.9 -4.3208 | gap 2, opp_overlap 909448, overlap 909441 TTGTACAACTGAAAA GGGCGCTCGACCC TTTC GGG--GAGCGCCC TTTGACCCGGAGAAC Smed_4417 910454 - 909645 - | methyltransferase type 11 TERM 663 911114 - 911087 - g 78 -4.9 -4.78572 | gap 1, opp_overlap 911068, overlap 911088 CGGCAAGGAAGAAAA GGCCGAGGAATT CATTC AATTCCGCG-CC GATAGTATCGTCAAG Smed_4418 910560 - 911693 + | periplasmic binding protein TERM 664 911731 - 911698 - f 76 -12.5 -3.13867 | gap 1, opp_overlap 911704, overlap 911701 911704 TCAGCCAGTAAGACA CAAG-GATCGGAGGGC TGA GCCCTCCGATTTCCTG TTCGCGAGGTTCGAA TERM 665 911727 - 911701 - f 75 -10.8 -3.70722 | opp_overlap 911704, overlap 911698 911704 GCCAGTAAGACACAA GGATCGGAGGGC TGA GCCCTCCGATTT CCTGTTCGCGAGGTT TERM 666 911704 - 911724 + F 100 -16.9 -3.92324 | opp_overlap 911701 911698 911704 AGTAAGACACAAGGA TCGGAGGGC TGA GCCCTCCGA TTTCCTGTTCGCGAG TERM 667 911724 - 911704 - f 88 -16.9 -2.95097 | opp_overlap 911704, overlap 911701 911698 AGTAAGACACAAGGA TCGGAGGGC TGA GCCCTCCGA TTTCCTGTTCGCGAG TERM 668 911861 - 911878 + G 70 -12.7 -2.86164 | opp_overlap 911859, overlap 911855 CGCAGGCATCGAAGG GCGCGGT CGCT ACCGCGC TCTCGTCGTTCGCCG Smed_4419 911823 - 912890 + | transport system permease protein Smed_4420 912884 - 913645 + | ABC transporter related TERM 669 915512 - 915560 + G 79 -13.6 -3.53012 | opp_overlap 915508, overlap 915513 AATGCGAGATATTCA TCGGCCATGTCGGCGGCGCCGC CGGCC GCGTCGCCGCCGAGGAGACCGC TTTCCCGCAGCGCAG TERM 670 915513 - 915559 + G 84 -17.1 -2.71712 | opp_overlap 915508, overlap 915512 ATGCGAGATATTCAT CGGCCATGTCGGCGGCGCCGC CGGCC GCGTCGCCGCCGAGGAGACCG CTTTCCCGCAGCGCA TERM 671 915868 - 915816 - g 75 -14.2 -2.80016 | opp_overlap 915822 915840, overlap 915819 CTTCAGGATGAACCA GAACG-TGCGGCCGATCCAGGAACGC GGA GCGG-CCTGAATTGGCCGCTTCGTTC GTAGCACAACGGCTG TERM 672 915865 - 915819 - g 70 -10.1 -3.54743 | opp_overlap 915822 915840, overlap 915816 CAGGATGAACCAGAA CG-TGCGGCCGATCCAGGAACGC GGA GCGG-CCTGAATTGGCCGCTTCG TTCGTAGCACAACGG TERM 673 915822 - 915861 + G 83 -15 -3.39895 | gap 1, opp_overlap 915819 915816, overlap 915840 GATGAACCAGAACGT GCGGCCGATCCAGGAACGC GGA GCGG-CCTGAATTGGCCGC TTCGTTCGTAGCACA Smed_4422 914413 - 915852 + | FAD linked oxidase domain-containing protein TERM 674 915840 - 915865 + F 79 -14 -3.14132 | opp_overlap 915819 915816, overlap 915822 GCCGATCCAGGAACG CGGAGCGGCC TGAATT GGCCGCTTCG TTCGTAGCACAACGG Smed_4423 915892 - 917313 + | pyridoxal-dependent decarboxylase Smed_4424 917452 - 917934 + | calcium-binding EF-hand-containing protein Smed_4425 918013 - 918384 + | hypothetical protein TERM 675 918426 - 918386 - f 77 -11.9 -3.55622 | opp_overlap 918395, overlap 918389 TCGAAGCTTCTTAAA TCACTATGATTTCAGGCCG GAT CGGCCTAAAATCATTGAGC AATCGATTCTGAAAG TERM 676 918423 - 918389 - f 88 -16.6 -2.90992 | opp_overlap 918395, overlap 918386 AAGCTTCTTAAATCA CTATGATTTCAGGCCG GAT CGGCCTAAAATCATTG AGCAATCGATTCTGA Smed_4426 918727 - 919002 + | hypothetical protein Smed_4427 919835 - 919014 - | methyltransferase type 11 TERM 677 919111 - 919143 + g 71 -13.5 -2.64616 | gap 1, overlap 919086 CCGCCGGCCTCATAG GCG-TCGCGTACGG CGGCTT CCGTGCGCGATCGC TCCTCTGCGTCGAGC TERM 678 919354 - 919332 - G 74 -12.7 -3.33151 | gap 1, overlap 919326 CGGCTGAAAGCAATA GCGGGCGCGC AACT GC-CGCCCGC CCTCACTGAGTGCCG Smed_4429 920296 - 920703 + | hypothetical protein Smed_4430 920779 - 921045 + | hypothetical protein TERM 679 921257 - 921222 - f 89 -2.7 -5.75342 | gap 3, overlap 921223 TGTCTTGAAAAAAAA GCGCAGCGAATTCGATCA TGC TG-TCGGA-TCGCTG-GC GGCTGGTGCGTCATT Smed_4431 921327 - 921812 + | 3-demethylubiquinone-9 3-methyltransferase Smed_4432 921809 - 922030 + | hypothetical protein Smed_4433 923093 - 922200 - | LysR family transcriptional regulator Smed_4434 923185 - 923625 + | transmembrane pair domain-containing protein Smed_4435 924642 - 923662 - | hypothetical protein TERM 680 924450 - 924439 - G 73 -3.6 -4.68424 | overlap 924440 GAAGGGATCGAAAAA GGGC AGGC ACCC GCCGACGAGCTGCAT Smed_4436 926021 - 924723 - | MscS mechanosensitive ion channel TERM 681 925169 - 925153 - G 72 -4.4 -4.55689 | gap 1 ATGACCGACACAAAA CGCGCAC GCAG GT-CGCG AATGGATCCGAACGT TERM 682 925544 - 925532 - G 74 -10.5 -3.69323 | CGATCAGCAGCGAAA GGCGC ATC GCGCC CAGATTGACGGCGGC TERM 683 925743 - 925727 - G 74 -12.3 -3.48276 | opp_overlap 925720 GCGCGGTCGAGACAA GCCATCG CTG CGATGGC CACGTACTCTGTGTG Smed_4437 926556 - 926176 - | hypothetical protein TERM 684 926229 - 926242 + g 73 -8.1 -3.98826 | opp_overlap 926229 926228 926226 TGACGGAAAATACAT CGGCA ATCT TGCCG TTTGTCACTTCATAA Smed_4438 927502 - 927056 - | hypothetical protein TERM 685 927389 - 927427 + g 95 -20.3 -3.14132 | overlap 927381 GGTGCCCCCGGCCGC TGCGCTGCCGCCGGAGC CGATA GTTCCGGCGGCGTCGCA TTCCTGAGCGGCCGC TERM 686 927940 - 927912 - g 100 -14.6 -4.11216 | opp_overlap 927913, overlap 927913 CTCCCATCTGGAAAA CGCTGGCTTCGG GCGCT CCGAAGCCAGCT GATTGACGTTAGCAG TERM 687 927913 - 927939 + G 87 -18.8 -2.75481 | opp_overlap 927912 927913 TCCCATCTGGAAAAC GCTGGCTTCGGG CGC TCCGAAGCCAGC TGATTGACGTTAGCA TERM 688 927939 - 927913 - g 90 -18.1 -3.06515 | opp_overlap 927913, overlap 927912 TCCCATCTGGAAAAC GCTGGCTTCGG GCGCT CCGAAGCCAGC TGATTGACGTTAGCA Smed_4439 927566 - 927946 + | hypothetical protein Smed_4440 928488 - 927949 - | hypothetical protein TERM 689 928493 - 928483 - G 74 -2.4 -4.8622 | opp_overlap 928483 928488 CGTCTTAATGAAAAA CCGC ATT GGGG GTTCCTTTCCTCAAT Smed_4441 929424 - 928693 - | hypothetical protein TERM 690 929248 - 929265 + g 79 -11.3 -3.85698 | opp_overlap 929239, overlap 929256 CAGAACCTCGGGCGC CTGCTGC CGGC GCAGCAG TTTCTCGAACCGCGC Smed_4442 929999 - 929421 - | TetR family transcriptional regulator TERM 691 930284 - 930299 + G 76 -10.4 -3.85817 | opp_overlap 930280, overlap 930281 CGCGCTACGAAGGGC GCGAGG CTTG CCTCGC TTTCTGGAAGGGCAT Smed_4443 930097 - 930495 + | hypothetical protein Smed_4444 931090 - 930581 - | hypothetical protein Smed_4445 931575 - 931087 - | TspO and MBR like protein TERM 692 931631 - 931591 - R 95 -13.9 -4.09685 | opp_overlap 931593, overlap 931593 GTCCATCCTGCAAAA GATGGAGGGGCCCGCCGGC GAG GCAAGCGAGGCCCTCCATT GTCCCTATCGGTTCT TERM 693 931629 - 931593 - R 100 -16.5 -3.64716 | opp_overlap 931593, overlap 931591 CCATCCTGCAAAAGA TGGAGGGGCCCGCCGGC GAG GCAAGCGAGGCCCTCCA TTGTCCCTATCGGTT TERM 694 931593 - 931629 + r 76 -12.1 -3.40071 | opp_overlap 931591 931593 CCATCCTGCAAAAGA TGGAGGGGCCCGCCGGC GAG GCAAGCGAGGCCCTCCA TTGTCCCTATCGGTT Smed_4446 931860 - 931636 - | hypothetical protein Smed_4447 932371 - 931889 - | beta-Ig-H3/fasciclin TERM 695 932391 - 932411 + H 75 -8.9 -4.05877 | TTTCTCCTCTCGATA CCGGGTGCG AAT TGCACCGGG TTCTTTCATGTGGTG TERM 696 932676 - 932707 + G 72 -13.8 -2.73364 | gap 1, opp_overlap 932672, overlap 932654 932648 932651 GCTCTCGAAGATCGA GCGCGGGCAGATGTT TCC AACA-CTGCCCACGC TGCTTCGGATCGCCA Smed_4448 932533 - 933114 + | XRE family transcriptional regulator Smed_4449 933840 - 933217 - | hypothetical protein Smed_4450 934997 - 934104 - | LysR family transcriptional regulator TERM 697 935632 - 935642 + G 76 -8.2 -4.12857 | GGTCCTATATCGGGT GGCG CGG CGCC TTCTTTCTCGTGGTT Smed_4451 935103 - 936311 + | major facilitator transporter Smed_4452 936403 - 937482 + | hypothetical protein Smed_4453 937679 - 938869 + | carboxymuconolactone decarboxylase Smed_4454 938979 - 939389 + | hypothetical protein Smed_4456 939773 - 940009 + | hypothetical protein Smed_4457 940103 - 940462 + | hypothetical protein Smed_4458 940735 - 940944 + | cold-shock DNA-binding domain-containing protein TERM 698 941027 - 941009 - f 71 -13.1 -2.62668 | opp_overlap 941009, overlap 941008 CATGATTCAACTAAG GCCGGGC GTGAT GCCCGGC TTTTTTTTGGCCGAT TERM 699 941009 - 941027 + F 100 -13.8 -5.75945 | opp_overlap 941009 941008 CATGATTCAACTAAG GCCGGGCG TGA TGCCCGGC TTTTTTTTGGCCGAT Smed_4459 941073 - 941297 + | hypothetical protein TERM 700 941304 - 941289 - f 86 -11.8 -4.08945 | ACGAGGCGGGCAAAA CCGGCG TGAT CGCCGG CTTCACCACGCACTC Smed_4460 941347 - 941643 + | hypothetical protein TERM 701 942342 - 942368 + G 75 -4.3 -4.67982 | opp_overlap 942338 942342, overlap 942344 CGGACGCAAAAGCCA TCGCGGCGTTC TACAC GGACGACGCTA TTTTCTTGCCTGCCA Smed_4461 942197 - 942637 + | putative signal peptide protein TERM 702 943362 - 943327 - f 77 -11.8 -3.53224 | gap 1 GAGGCTTCGGGCAAA GCCTAGAGCCCGACCGC CCC GCGGTCGCGCCCT-GCC GCCTAAGAACTATAA TERM 703 943689 - 943676 - g 75 -3.7 -4.68593 | overlap 943678 TCCAGCATCGAAAAA GGCGC GCCG GGGCC CGAGATCGGCATCGT Smed_4462 943475 - 943852 + | XRE family transcriptional regulator Smed_4463 943842 - 945164 + | HipA domain-containing protein TERM 704 945611 - 945590 - T 100 -15.9 -4.03234 | opp_overlap 945581 TTGCGCCGAGAGAAA TGCCGCGTC CTTC GACGCGGCA TCGGTGGCGTTTGGC Smed_4465 946418 - 945633 - | ABC transporter related TERM 705 945739 - 945756 + g 72 -2.6 -4.72272 | overlap 945718 945740 TCCTCGGTGCGGGCG TGGCCG ACGACC TGGCCG TTTTTCATCACGGAG Smed_4466 947767 - 946433 - | inner-membrane translocator TERM 706 947828 - 947846 + r 73 -12.4 -3.07443 | GAGAGCGGTCAGCAC GTCCGGTC ATG GGCCGGAC TTCCGTCGACTCTCG TERM 707 947897 - 947947 + r 100 -18.6 -3.18582 | overlap 947879 947898 TGCCGGTCGGCCTCG CA-TCTTGCGAGAGCGCCGCAACG ATTTG CGTTGCGGCGCTCTCG-AAGACTA TTGATCGGTCCCGTG TERM 708 947898 - 947945 + r 100 -23.7 -3.1552 | gap 1, overlap 947879 947897 GCCGGTCGGCCTCGC ATCTTGCGAGAGCGCCGCAACG ATTTG CGTTGCGGCGCTCTCG-AAGAC TATTGATCGGTCCCG Smed_4467 949008 - 947971 - | D-xylose ABC transporter, periplasmic substrate-binding protein TERM 709 948176 - 948192 + g 79 -9.4 -4.1673 | overlap 948158 CCGGCGGCAAGCGCC GCGGCA ATCTC TGCCGC TTTCTTACCGAGTTC TERM 710 949091 - 949110 + H 88 -5.6 -5.24531 | gap 1, overlap 949093 CGCTGCCGTAAACCT CTCCGGTGC TGC GC-CCGGCG TTTTTTCTCGACAGT TERM 711 950164 - 950178 + G 84 -11.4 -4.19817 | overlap 950152 950170 GGATGCCGCCGGGCT CTGCCG CTG CGGCAG TTTTGGCTGCGTCGA Smed_4468 949400 - 950611 + | putative transcriptional regulator protein TERM 712 950721 - 950703 - T 100 -13.8 -4.59773 | opp_overlap 950702 950700 950698 950703 GGCTACGCCGAAAAA GGCCGGGA GGT CCCCGGCC ATCTCTTTTAGAACA TERM 713 950703 - 950721 + T 71 -13.1 -2.63623 | opp_overlap 950703, overlap 950702 950700 950698 GGCTACGCCGAAAAA GGCCGGG AGGTC CCCGGCC ATCTCTTTTAGAACA Smed_4469 951738 - 950746 - | oxidoreductase domain-containing protein Smed_4470 952030 - 952284 + | hypothetical protein Smed_4471 952737 - 952288 - | hypothetical protein Smed_4472 953780 - 952800 - | LysR family transcriptional regulator TERM 714 952895 - 952918 + g 74 -14.6 -2.53396 | overlap 952894 952892 952890 GCCCGTAGGGCTTGA TGCGGATCGG AAAC CCGGTCCGCA ATATCTTGATTTCAC Smed_4473 954054 - 955121 + | putative sugar uptake ABC transporter periplasmic solute-binding protein precursor TERM 715 955163 - 955135 - f 84 -16 -2.52676 | opp_overlap 955135, overlap 955122 GATGCGGCGAACCGA GAGGGTGCGCGA CAGGC TCGCGCGCCCTC TTAATCCACGCGGCA TERM 716 955135 - 955163 + F 100 -18.2 -3.14132 | opp_overlap 955122 955135 GATGCGGCGAACCGA GAGGGTGCGCGA CAGGC TCGCGCGCCCTC TTAATCCACGCGGCA TERM 717 955214 - 955224 + F 80 -4.6 -4.97158 | overlap 955213 CTGTAGCACTTTGAC CCGC CGC GTGG TTTTATTTCGTATCG Smed_4474 955315 - 956850 + | ABC transporter related Smed_4475 956850 - 958064 + | monosaccharide-transporting ATPase Smed_4476 958211 - 959206 + | hypothetical protein Smed_4477 959217 - 960713 + | aldehyde dehydrogenase TERM 718 960933 - 960916 - g 81 -6.3 -4.72272 | gap 1 CTCCTGGATGAAAAA TCAG-GGG CTT CCCGCTGA CACTTTTGACGGGCG TERM 719 961045 - 961075 + G 73 -8.3 -4.07568 | gap 1, overlap 961049 GCGCGGGGTCTACGA GGCGGGGGGCTTCC CGGT GGAA-TTCCCCGTC TTTTCGACCGGGGAA TERM 720 961495 - 961520 + G 71 -8.2 -3.9243 | overlap 961496 GGGCAACGCCGCCAT TCCGGCGGTG GATGCG CGCCGTCGGG TTATTTCGCAGCTTA Smed_4478 960818 - 962563 + | dihydroxy-acid dehydratase TERM 721 962624 - 962653 + F 95 -15 -3.76224 | TGCCACTCTGATTTG CTGCGCGGCGGT GTGAAA ACCACCGCGCAG TTTCCTGCATAGGGC Smed_4479 962787 - 963467 + | hypothetical protein TERM 722 963543 - 963516 - T 79 -12.7 -3.45832 | TAACCCGAGAACCAA CCCTCTTCCCG TTCTAG CGGGGAGAGGG GTCTCCGGCAGGCCG Smed_4480 964429 - 963611 - | transglutaminase domain-containing protein TERM 723 964458 - 964468 + r 79 -6.8 -4.56597 | opp_overlap 964458 ATCACTTCAGGAAAA CCGT GTC ACGG TTTTTCCGGAAGCGC TERM 724 964468 - 964458 - R 74 -6.8 -4.2717 | opp_overlap 964458 ATCACTTCAGGAAAA CCGT GTC ACGG TTTTTCCGGAAGCGC Smed_4481 965435 - 964494 - | hypothetical protein Smed_4482 966849 - 965440 - | hypothetical protein TERM 725 967090 - 967105 + H 73 -3.2 -4.80178 | CGAGGAGCGGGGTCG CGCC AACCGGAG GGCG TTTTCTTCATTCATC TERM 726 967343 - 967354 + G 71 -5.8 -4.32436 | overlap 967340 TCATGCTTGCTCGCC TGGC TCCG GCCA TTTTCGTGCTGCTCT TERM 727 967689 - 967678 - g 72 -4.4 -4.58395 | opp_overlap 967684 CTGATCGGCGAAAAA CTGA ACGG TCAG CAGAAGCTTGGCCTT TERM 728 968096 - 968115 + G 72 -4.2 -4.56597 | gap 1, overlap 968087 TGGTGCCGCCGCTTG CGGC-CGGC GAA GCTGCGCTG TTTTTCGGGGAGGCC Smed_4483 967330 - 968247 + | hypothetical protein TERM 729 968318 - 968297 - T 100 -18.7 -4.35524 | opp_overlap 968297, overlap 968271 TCTCCAAACGGAAAA GCGGCGGGC TTCC GCCCGCCGC TTTCAAGTATTCCGA TERM 730 968297 - 968318 + T 100 -18.7 -3.66803 | opp_overlap 968271 968297 TCTCCAAACGGAAAA GCGGCGGGC TTCC GCCCGCCGC TTTCAAGTATTCCGA TERM 731 968357 - 968369 + T 75 -9.1 -4.07568 | GAGCGTGCCTTACCC TCGCG GCG CGCGA TTTTCCGCGCGGCGC Smed_4484 969847 - 968351 - | DEAD/DEAH box helicase domain-containing protein TERM 732 969382 - 969353 - G 72 -7.7 -4.1552 | CAGGTCGTGAATAAA GCCGAGGTCGAGC ATCT GGTCGGCCTCGTC CAGGACGAGGTAGCG TERM 733 969990 - 970008 + H 70 -4.5 -4.56133 | overlap 969981 CTGTGCTGCCGCGGA GTGCGGA CATGT TTCGCGC TTTTCCTTCTTCACG Smed_4485 970404 - 970922 + | hypothetical protein TERM 734 970988 - 971009 + T 72 -6.5 -4.35461 | overlap 970979 GAGTTAGAGCGCGGT GCGGGCG GAGATCCG CGCTCGC TTTTCCTCATATTGC Smed_4486 971741 - 971016 - | hypothetical protein TERM 735 972185 - 972203 + G 70 -11.6 -3.14468 | opp_overlap 972174, overlap 972190 TGAAGGCGGTTGGCC GGCCGCCG ATG CGGCGCCC TTCGGTATCGTCCAG TERM 736 972332 - 972348 + G 89 -10.8 -4.25104 | AGTCGTCTCGATCGA GCCGGC ACGCG GCCGGC TTTTGCTCGCGGACG Smed_4487 971781 - 972911 + | FAD dependent oxidoreductase TERM 737 973730 - 973768 + G 74 -14.6 -2.53382 | overlap 973708 AAGGTTTCCGCGCGC CCGCGCGGCGACAAGG CCAGACA TCTTGTTGCGGCGCGG TCAGTTCAGGATGAT Smed_4488 973034 - 973849 + | hypothetical protein Smed_4489 973981 - 974910 + | chitin deacetylase Smed_4490 974910 - 975413 + | hypothetical protein TERM 738 975559 - 975590 + G 81 -11.6 -3.91897 | gap 1, overlap 975561 TCGCACCGTTCGGCA GTATCATGGAGGCGG ACC CCGCCTCCATGC-GC TTTATCAATGGCGGC TERM 739 975561 - 975589 + G 70 -13.1 -2.94924 | overlap 975559 GCACCGTTCGGCAGT ATCATGGAGGCGG ACC CCGCCTCCATGCG CTTTATCAATGGCGG TERM 740 975681 - 975696 + G 88 -8.2 -4.74706 | ATCATCAACATCTTT CGCGGG CAAC CCCGTG TTTTTCCCTATTCCG Smed_4491 975501 - 976007 + | ureidoglycolate hydrolase Smed_4492 976237 - 976599 + | hydroxyisourate hydrolase Smed_4493 977778 - 976642 - | L-lactate dehydrogenase (cytochrome) Smed_4494 979208 - 977901 - | guanine deaminase TERM 741 978776 - 978787 + g 74 -5.8 -4.52589 | opp_overlap 978775 TCTCGGCGAAGAAGG CGTC GGCG GACG TTTTGTGTACGGAAC Smed_4495 980437 - 979205 - | hypothetical protein Smed_4496 981489 - 980560 - | LysR family transcriptional regulator TERM 742 981382 - 981417 + g 90 -19.8 -2.71011 | gap 1, opp_overlap 981401 GGTCATGCCGAGCTC GTCGCCCGCCTTGGTGA AAC TC-CCGAGGCGGGCGGC TGCTTCGAAGACCCT Smed_4497 981571 - 981774 + | hypothetical protein Smed_4498 984139 - 981782 - | xanthine dehydrogenase molybdopterin binding subunit TERM 743 982286 - 982274 - G 71 -4.7 -4.39989 | overlap 982275 982276 AGCAAAGTAGTAAAA CGGCG TGC CGCGG CCGGCGGCCCGATCC TERM 744 983167 - 983146 - G 86 -12.3 -4.18494 | gap 1 TATCCGCATGGAAAA GGGCGCGGTC GGT GACCG-GCCC GGAGAGATCGGCCGA Smed_4499 985626 - 984136 - | xanthine dehydrogenase small subunit Smed_4500 986429 - 985653 - | 3-hydroxybutyrate dehydrogenase TERM 745 985748 - 985764 + g 85 -2.9 -5.26316 | opp_overlap 985742 CCAGAGAAGCCACCT GTTCGAC GGT GATGAAC TTTTTTGTCGGCTGC TERM 746 986029 - 986040 + g 93 -7.2 -5.14163 | GCAATATTGATGATC CGGC CCCA GCCG TTTTTCTTCATCGGT TERM 747 986765 - 986750 - g 74 -4.6 -4.54821 | overlap 986752 ACGGCAACCAGAAAA TTGCCG GCAT CGGCCA GAAAGAGTTCAAGCA TERM 748 987743 - 987757 + G 78 -7 -4.62069 | overlap 987744 CCCATTGGGACCCGG ACGCGC GGG GCGCGA TTTTTGGCATGACGC Smed_4501 986674 - 988167 + | glycerol kinase Smed_4502 988339 - 988662 + | regulatory protein ArsR Smed_4503 988659 - 989090 + | activator of Hsp90 ATPase 1 family protein Smed_4504 989154 - 989372 + | hypothetical protein TERM 749 989680 - 989690 + G 71 -5.4 -4.41348 | opp_overlap 989680 TGTTTCACGAAATAC GTCA AAG TGAC TTTCTTTCGCGGCGC Smed_4505 989386 - 989844 + | hypothetical protein TERM 750 990139 - 990151 + G 83 -9.1 -4.27316 | GGCGCCTCGTTGGAC GACCC TTC GGGTC TTTTCAATTCCAGCC TERM 751 990235 - 990284 + G 100 -23.7 -2.70932 | opp_overlap 990215, overlap 990226 GAAGAGGCGTTCATC GCGCTTGTGCGTGCCGCCGTG GCGCTGAA CATGTCGGCACGCACGAGCGC TCGTTCGCAAAAGAA Smed_4506 989890 - 990315 + | hypothetical protein TERM 752 990794 - 990813 + G 76 -9.2 -4.07568 | opp_overlap 990774 GCTCTTCGGCCAGTC GCTGGACG ACTA CGACCAGC TTTTCGCCGAAAAAC Smed_4507 990423 - 991466 + | luciferase family protein Smed_4508 991539 - 992288 + | methionine aminopeptidase TERM 753 992475 - 992515 + G 79 -13.5 -3.40522 | gap 3, opp_overlap 992446 992445 CGGCCACCGCGATCG CCGGCGCGATAG-CCATGGC GGTC GCCATGGGCT-TCG-GCCGG TTCTCCTACACCCCT Smed_4509 992444 - 993622 + | hypothetical protein TERM 754 994350 - 994377 + G 78 -7 -4.56775 | ACGTCGAAGGTGCAT CGCAGCGTGT GCAGGAAG ACACGATGCG TTTTTCCAGCACGGT TERM 755 994539 - 994553 + G 75 -2.8 -4.87665 | overlap 994495 994537 CGGCCGTATTCTGGT CCGT TTTCGGC ACGG TTTTTCTGGCTGCAG Smed_4510 993776 - 995038 + | transport protein TERM 756 995051 - 995072 + T 100 -14.5 -3.9398 | opp_overlap 995054, overlap 995054 TAACGGCAGGCATCA GAAGGCGGA GCGA TCCGCCTTC TTTCTCGCATTCTCG TERM 757 995054 - 995069 + T 80 -10.4 -4.08948 | opp_overlap 995054, overlap 995051 CGGCAGGCATCAGAA GGCGGA GCGA TCCGCC TTCTTTCTCGCATTC Smed_4511 996046 - 995048 - | hypothetical protein Smed_4512 996217 - 996804 + | NnrU family protein TERM 758 997341 - 997360 + G 73 -12.8 -3.14963 | overlap 997328 ACGGCGCTTCGCGAC GCGGCGCG GCTT CGTGCCGC TTACCTCCTTATCGA Smed_4513 996939 - 997607 + | hypothetical protein TERM 759 998659 - 998626 - g 74 -12.5 -3.28924 | gap 1, overlap 998629 CATCCCCTTCGAGAA GCAGGATCTCCAGATC GTC GACCTGGTGATCC-GC GAGGGGCGCGCGGCG TERM 760 998657 - 998629 - g 72 -13.9 -2.82623 | overlap 998626 CCCCTTCGAGAAGCA GGATCTCCAGATC GTC GACCTGGTGATCC GCGAGGGGCGCGCGG engA 997718 - 999151 + | GTP-binding protein EngA Smed_4515 999391 - 999930 + | BadM/Rrf2 family transcriptional regulator Smed_4516 1001173 - 999986 - | acyl-CoA dehydrogenase type 2 TERM 761 1000738 - 1000749 + g 76 -5.8 -4.64763 | overlap 1000704 CGATTATCCGGGTTA TCGG GCTA CCGA TTGTTTTTTCGCTGC TERM 762 1001791 - 1001809 + G 72 -4.4 -4.58663 | opp_overlap 1001791 1001792, overlap 1001792 TGTCGAAGCCGGAAA TCGCGATC GTT GGCCGCGG TTTTTCGGGCATCAT TERM 763 1001976 - 1001945 - g 70 -12.2 -3.15999 | opp_overlap 1001971 1001973 CTGCGAGATACTCAA CAGCCGCGTCCG CGATCTTT CGGTCGCGGCCG GCCAGCCGGATGATT Smed_4517 1001730 - 1003130 + | hypothetical protein TERM 764 1003543 - 1003580 + G 82 -11.4 -4.08767 | gap 2, overlap 1003545 CGACGATCCCGAGGT GCTTGCCGGCGATGGACA TCTC TATCC-TCGCCGGC-AGC TTTTCGGGCGCTACG TERM 765 1003882 - 1003845 - g 73 -7.1 -4.36914 | gap 1 GCGCGCTCGACAAAA TCCGG-ACGGATGACC GCGTACT GATCATCGGTACCGGA CTGACCTCGGCCGAC Smed_4518 1003250 - 1004707 + | FAD dependent oxidoreductase TERM 766 1005287 - 1005314 + G 78 -7.1 -4.59773 | gap 2, overlap 1005287 1005288 ACCAATCTGGGCGCC G-CCA-CGCCGAT CGCC ATCGGCGGTGGAC TTTTTGGCGATGACG Smed_4519 1004915 - 1006273 + | hypothetical protein Smed_4520 1006356 - 1007126 + | band 7 protein TERM 767 1007123 - 1007111 - f 75 -9.1 -4.06419 | GCTGGCGACAAAGAA GGAGG GTT CCTCC TAAAGCGCTTCCAGG Smed_4521 1007251 - 1007721 + | NUDIX hydrolase Smed_4522 1008920 - 1007760 - | siroheme synthase TERM 768 1008788 - 1008821 + gT 75 -9.5 -3.92324 | gap 1 GTTCGGCTTTCCAGG CGGCTGCATCGCTGCC GCC GGCGACGA-GCACCCG TTTGCTCTTCAGAGG TERM 769 1008869 - 1008845 - GT 76 -6.3 -4.41548 | opp_overlap 1008854 1008855 1008858, overlap 1008846 TCAGAGGCCAGAAAA GCGGCAGCG TCGCGAG CGCGGCCAC GCGCTCTCGCTTTGC TERM 770 1008854 - 1008879 + gT 71 -10.3 -3.53444 | opp_overlap 1008845 1008846, overlap 1008855 1008858 AGAAAAGCGGCAGCG TCGCGAGCGCG GCCA CGCGCTCTCGC TTTGCGGGCCGCTCA TERM 771 1008855 - 1008878 + gT 76 -13.8 -2.71924 | opp_overlap 1008845 1008846, overlap 1008854 1008858 GAAAAGCGGCAGCGT CGCGAGCGCG GCCA CGCGCTCTCG CTTTGCGGGCCGCTC Smed_4523 1011549 - 1008892 - | molybdopterin oxidoreductase TERM 772 1009251 - 1009234 - GR 86 -8.4 -4.56597 | overlap 1009236 GTCCTCTTCGAAAAA GGCGAG GCGAAG CTCGCC TGAGGTGCGGTCCGT Smed_4524 1011890 - 1011552 - | nitrite reductase (NAD(P)H), small subunit Smed_4525 1014357 - 1011895 - | nitrite reductase (NAD(P)H), large subunit TERM 773 1013893 - 1013907 + g 72 -4.2 -4.58283 | opp_overlap 1013886 TCCAAGCAGGCCGCC GCCG ATGACCA CGGC TTTTTCGCGCGATTG Smed_4526 1014737 - 1014420 - | hypothetical protein Smed_4527 1016333 - 1015026 - | putative nitrate transport protein TERM 774 1015114 - 1015090 - G 71 -13 -3.07291 | overlap 1015113 AAGGACTTGATGTAA TCTTCGATCC TGCCG GGATCGAAGA CATGGCCGTCAATGA Smed_4528 1016951 - 1016361 - | response regulator receiver/ANTAR domain-containing protein Smed_4529 1017792 - 1017088 - | TfuA domain-containing protein TERM 775 1017193 - 1017207 + g 81 -7 -4.72986 | overlap 1017195 CACCTTTAGAAGTTC CAGGCC GTC GGCCCG TTTTTGGTCCACATA Smed_4530 1018343 - 1017885 - | XRE family transcriptional regulator TERM 776 1018321 - 1018332 + g 81 -2.2 -5.16841 | ACAAAGGCGTCGATC GGGT TAGG ATCC TTTTTGTTCATCTGC Smed_4531 1018574 - 1019110 + | carbohydrate kinase TERM 777 1019656 - 1019678 + G 74 -13.4 -2.8655 | GGGGCGCTGGCCATG TCGGAGCCCG GCT CCGGCTCCGA TGTCGTCTCGATGAA Smed_4532 1019266 - 1020429 + | acyl-CoA dehydrogenase domain-containing protein TERM 778 1021518 - 1021531 + G 79 -8.1 -4.31397 | TCCCGTCGGCATCGT CGCCA ATAA TGGCG TTCTTTTCTCGGAGT Smed_4533 1020493 - 1022100 + | propionyl-CoA carboxylase Smed_4534 1022112 - 1022498 + | endoribonuclease L-PSP TERM 779 1022664 - 1022691 + G 70 -12.6 -2.88544 | overlap 1022677 CGATGAGGCGATCCG GATCGGGGCGGC GCCC GCCGCCCAGAGC TATCTGGCGATCGGG Smed_4535 1022515 - 1024503 + | carbamoyl-phosphate synthase L chain ATP-binding TERM 780 1025270 - 1025293 + G 82 -11 -4.07687 | opp_overlap 1025287, overlap 1025239 CGATTCACTCGAGGT CCGCGCGTTT CTCG AAACGCGGGG TTTTAACACCGGGCT Smed_4536 1024500 - 1025369 + | hydroxymethylglutaryl-CoA lyase Smed_4537 1025366 - 1026151 + | enoyl-CoA hydratase Smed_4538 1026227 - 1026598 + | hypothetical protein TERM 781 1026947 - 1026910 - g 74 -9.1 -3.87373 | gap 1, opp_overlap 1026911 1026923 1026926, overlap 1026911 1026926 GACATGTTGGACAAA GGCGCGGTACCGCAAACG CAC CAGTTGCG-CACCGCGCT TCTGGCGCGTGATTA TERM 782 1026946 - 1026911 - g 70 -12.6 -2.92102 | gap 1, opp_overlap 1026911 1026923 1026926, overlap 1026910 1026926 ACATGTTGGACAAAG GCGCGGTACCGCAAACG CAC CAGTTGCG-CACCGCGC TTCTGGCGCGTGATT TERM 783 1026956 - 1026926 - g 85 -14.6 -3.59979 | opp_overlap 1026911 1026923 1026926 1026952, overlap 1026911 1026910 GCGCGGTACCGCAAA CGCACCAGTTGCGC ACC GCGCTTCTGGCGCG TGATTATCACGGGGT Smed_4539 1026604 - 1027104 + | RES domain-containing protein Smed_4540 1028599 - 1027229 - | FAD linked oxidase domain-containing protein Smed_4541 1029831 - 1028728 - | sulfate ABC transporter, ATPase subunit Smed_4542 1030713 - 1029847 - | sulfate ABC transporter, inner membrane subunit CysW Smed_4543 1031560 - 1030703 - | sulfate ABC transporter, inner membrane subunit CysT Smed_4544 1032591 - 1031566 - | sulfate ABC transporter, periplasmic sulfate-binding protein Smed_4545 1033913 - 1032855 - | alanine racemase domain-containing protein TERM 784 1033567 - 1033557 - G 86 -6.8 -5.03314 | TGCATCGGCAAAAAA GGCT CCG AGCC CGTCAACGACAGTCG Smed_4546 1034072 - 1034914 + | extracellular solute-binding protein TERM 785 1034960 - 1034915 - f 81 -15.3 -2.61548 | opp_overlap 1034924, overlap 1034912 1034911 GTCGAGTACAAGTGA TCCTGACATGGCGGCTCCGCC GGCT GGCGGAGCTGCCTTGTCCGAT AGAATGGCTGCCCCA TERM 786 1034924 - 1034951 + F 100 -20.6 -3.33162 | opp_overlap 1034915 1034912 1034911 AAGTGATCCTGACAT GGCGGCTCCGCC GGCT GGCGGAGCTGCC TTGTCCGATAGAATG Smed_4547 1034975 - 1035637 + | polar amino acid ABC transporter, inner membrane subunit TERM 787 1036029 - 1035994 - g 81 -14.1 -3.58269 | gap 1 CAATCGATCCCCAAA GGTCAGACCGA-GGCC GCCAA GGCGATCGGTCTGACC TTCGCCCAAACCTTC Smed_4548 1035643 - 1036302 + | polar amino acid ABC transporter, inner membrane subunit Smed_4549 1036316 - 1037083 + | ABC transporter related Smed_4550 1037118 - 1037501 + | endoribonuclease L-PSP TERM 788 1037983 - 1038014 + G 74 -13 -3.38178 | opp_overlap 1037945, overlap 1037984 GACTGCCTCCGGCCG CCTCCTCGTCGATC ACAT GAGCGACGAGGAGA TTATCGCATTCATTC TERM 789 1037984 - 1038013 + G 80 -16.5 -2.62425 | overlap 1037983 ACTGCCTCCGGCCGC CTCCTCGTCGATC ACAT GAGCGACGAGGAG ATTATCGCATTCATT Smed_4551 1037516 - 1038349 + | regulatory protein IclR Smed_4552 1039444 - 1038362 - | ABC transporter related Smed_4553 1040376 - 1039441 - | ribokinase-like domain-containing protein Smed_4554 1041398 - 1040379 - | sugar isomerase (SIS) TERM 790 1041425 - 1041444 + r 72 -9.2 -3.64703 | GACGCCCCCACTGGT GAGCCCGG AGAT CAGGGCTC TTTGCATGACAAGGC Smed_4555 1042246 - 1041401 - | binding-protein-dependent transport systems inner membrane component Smed_4556 1043127 - 1042246 - | binding-protein-dependent transport systems inner membrane component Smed_4557 1044494 - 1043256 - | extracellular solute-binding protein Smed_4558 1044718 - 1045947 + | ROK family protein Smed_4559 1046157 - 1047056 + | sulfate adenylyltransferase subunit 2 Smed_4560 1047056 - 1048957 + | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein Smed_4561 1048954 - 1049793 + | 3'(2'),5'-bisphosphate nucleotidase TERM 791 1050286 - 1050265 - g 82 -2.9 -5.14563 | overlap 1050266 TTTCTTATGAAAAAA CGGCGGA TCTCGAAT TCCGCCT GTCGATGGGCATGGT Smed_4562 1049841 - 1050581 + | phosphotransferase domain-containing protein Smed_4563 1050578 - 1051570 + | putative carbamoyl phosphate synthase large subunit Smed_4564 1051576 - 1052502 + | NAD-dependent epimerase/dehydratase Smed_4565 1053735 - 1052572 - | hemolysin-type calcium-binding region Smed_4566 1055109 - 1053994 - | glycosyl transferase group 1 TERM 792 1054345 - 1054362 + g 70 -10.5 -3.58269 | CCGCAGATCGACGGC GTGGGCC GGGA GGCCCGC TTTCGCGATCAGTTC TERM 793 1054771 - 1054755 - G 83 -9.3 -4.386 | overlap 1054757 GAACGTTCCAGAAAA CCGGCGC CCC GTGCCGG GCCAGCCCCGCCGCC Smed_4567 1056345 - 1055119 - | glycosyl transferase group 1 TERM 794 1055278 - 1055296 + g 72 -4.5 -4.57569 | opp_overlap 1055293 GGCGGCGACGTCACG CGCCTTG ACCAC CAAGCCG TTTTTCCCCGGCTGC Smed_4568 1058700 - 1056505 - | polysaccharide biosynthesis protein CapD TERM 795 1056779 - 1056765 - G 74 -12.8 -3.29144 | opp_overlap 1056762 1056774 GCACCGCTCCGAGAA CGCCGG GCA CCGGCG AGCTTATGCGCTTGT Smed_4569 1059983 - 1059069 - | formyl transferase domain-containing protein TERM 796 1059911 - 1059921 + g 71 -8.2 -3.92869 | opp_overlap 1059902, overlap 1059908 TCACAAGCGCCGGAG GGCG CCC CGCC TTTATGAGTGCCTCC Smed_4570 1060445 - 1061317 + | putative ATPGTP-binding protein Smed_4571 1061415 - 1062353 + | putative enzyme TERM 797 1063743 - 1063731 - g 70 -10.5 -3.66018 | opp_overlap 1063731 CGAGGACGTCAAGAA CCGCC GTG GGCGG TTGCTCGCGAACGAT Smed_4572 1062364 - 1063977 + | hypothetical protein Smed_4573 1065976 - 1063988 - | lipopolysaccharide biosynthesis protein TERM 798 1064154 - 1064138 - G 70 -12.3 -3.21747 | GGACGTTATGACGAA GCCACCA TAG TGGTGGC GCCGATGGATCTCGG TERM 799 1065130 - 1065143 + g 74 -5.3 -4.64598 | GGGAATCCGCATCGA TCATC TGAG GATGA TTTTTGCCGTACTTG Smed_4574 1067623 - 1066340 - | hypothetical protein Smed_4575 1068898 - 1067657 - | glycosyl transferase group 1 TERM 800 1068975 - 1069015 + r 73 -3.1 -4.81249 | TCGAGGCTTCTGTTT CTCAGCCAGCTTGTCAGAT CGC GTCCGACAAGAGCGCCGAG TTTTTCCGTTTCAAG Smed_4576 1069792 - 1068953 - | sulfotransferase Smed_4577 1071472 - 1070114 - | polysaccharide biosynthesis protein TERM 801 1070266 - 1070250 - G 73 -6.5 -4.26076 | overlap 1070251 GCAGTCGCATGAAAA CCGATCG CGG CGATCGT GACGCTGCGCAATAT TERM 802 1070516 - 1070504 - G 74 -10.5 -3.72893 | overlap 1070473 GACTGCCCGATGAAA GGCGC CGA GCGCC TTGGCGGCCCATGCC TERM 803 1072479 - 1072467 - g 71 -5.5 -4.37092 | overlap 1072468 1072471 AGTCCTCTGACAAAA TCGAC CTC GCCGA CGTCCCCGAGGTCGC TERM 804 1072937 - 1072921 - g 72 -2.2 -4.72986 | GATCGCGATCAAAAA GCTGAT TTCCC AACAGC ACTCCGCCGAAGAAC Smed_4578 1071872 - 1073125 + | polysaccharide export protein TERM 805 1073316 - 1073362 + G 77 -4.3 -4.82901 | gap 1, overlap 1073296 1073309 1073318 TGTGCCTGCCGCTGA TGGCGGCAACCGCGGTCGTGGT TTGG GCAACGCTCG-GCTTGCCGCTG TTTTTCTCCCAGGCG Smed_4579 1073189 - 1073869 + | sugar transferase Smed_4580 1073923 - 1074609 + | LmbE family protein TERM 806 1075160 - 1075195 + G 72 -2.3 -4.73108 | overlap 1075180 GGGGCCGAAATCGAT GGCCGTCCGGTCGGC AGTTTC GGCGACATCGCGGCC TTTTCCTTTTGTCAG TERM 807 1075289 - 1075279 - g 74 -4.6 -4.59853 | overlap 1075280 GGAACTCTGGAAAAA GGCC TGG AGCC GCAAGGATCACGGCA Smed_4581 1074677 - 1075861 + | DegT/DnrJ/EryC1/StrS aminotransferase Smed_4582 1076950 - 1076108 - | sulfotransferase TERM 808 1077055 - 1077073 + H 75 -3.9 -4.72986 | gap 1, overlap 1077058 CAGAATGAAATCTAC TCGCCGTT TCTC AACGG-GA TTTTTGATGCAAATA TERM 809 1078087 - 1078110 + G 77 -13.2 -3.55622 | opp_overlap 1078087 CTGACGCGACAGAAA GGCTTCGATC TCCT GATCGAGGCC TTTGCGAGGATTGCC TERM 810 1078110 - 1078087 - g 82 -11 -4.05033 | opp_overlap 1078087 CTGACGCGACAGAAA GGCTTCGATC TCCT GATCGAGGCC TTTGCGAGGATTGCC TERM 811 1078624 - 1078583 - g 70 -12.4 -3.24232 | gap 3, opp_overlap 1078597, overlap 1078581 1078579 CGGCCTTGAAACATA CGGCT-CG-CGACC-ATGCCG CAA CGGCTTCGGTCGTCGGAGCCG GCTCGGCTTGAGCTC Smed_4583 1077445 - 1078635 + | glycosyl transferase group 1 TERM 812 1078934 - 1078913 - g 72 -2.2 -4.81551 | overlap 1078916 GATCGAGACGAAAAA GACCGCTC CGGAGC AAGCCGTC AAGCCATCCCAAGGT TERM 813 1079241 - 1079254 + G 72 -3.7 -4.66537 | GTCGCTTTCGCAGTC GCTGC CGTC GCCGC TTTTGTGTTCGCCGA TERM 814 1080366 - 1080380 + G 73 -11.4 -3.61371 | overlap 1080360 1080372 GTCAAATTGCGGCAT CACCGG GGG CCGGTG TTTACCGTGCCCTTT Smed_4584 1078743 - 1080836 + | MscS mechanosensitive ion channel TERM 815 1081688 - 1081676 - g 74 -4.7 -4.56597 | opp_overlap 1081680 1081684, overlap 1081677 1081678 TGGCTGGGCGAAAAA GCGCC GCA GGCGG TTCCCGCGCTTCTTG Smed_4585 1080932 - 1082029 + | glycosyl transferase group 1 Smed_4586 1082026 - 1082796 + | polysaccharide deacetylase Smed_4587 1083613 - 1082783 - | beta-lactamase domain-containing protein TERM 816 1083569 - 1083545 - G 77 -13.5 -3.37344 | TCCGTAGTGAAGGAA CTGCTCGCCGG ATA CCGGCAAGCTG CCTCTAACGCCCCAA Smed_4588 1083849 - 1085048 + | hypothetical protein Smed_4589 1086435 - 1085038 - | UDP-glucose 6-dehydrogenase Smed_4590 1086691 - 1088175 + | putative adenylate/guanylate cyclase Smed_4591 1088184 - 1089152 + | exported protein precursor TERM 817 1089364 - 1089387 + F 73 -3 -4.72007 | opp_overlap 1089331 CCGGCGGGGCGAGCA CATGTCGCTG TAAG CCGCCGCATG TTTCTTTTGATCGAC TERM 818 1091374 - 1091400 + G 78 -6.5 -4.5442 | gap 1, overlap 1091375 CGATGACGAGGCTCT TGTTC-CCGCCG ATCT CGGCGGCGGCCA TTTTGTCCTTGCCCG Smed_4592 1089560 - 1091449 + | ABC transporter related TERM 819 1091783 - 1091771 - g 71 -9.1 -3.82097 | opp_overlap 1091770 1091769 TCGAAAGCTACGAAA CGGTC GAG GACCG GATTTTCACCTTCCA Smed_4593 1091446 - 1093347 + | extracellular solute-binding protein Smed_4594 1093349 - 1094347 + | binding-protein-dependent transport systems inner membrane component Smed_4595 1094344 - 1095519 + | binding-protein-dependent transport systems inner membrane component Smed_4596 1095598 - 1096812 + | putative membrane-anchored protein TERM 820 1097667 - 1097611 - g 79 -15.7 -2.94099 | opp_overlap 1097611 CGCTTCGATCATATA GGTGCGGGCGAGCTCACCGGCAAGCTC CAG GCGCTTGCCGGTGAACTCGGCCTCGAA GATCGCTTAGGATGG Smed_4597 1096819 - 1098066 + | glycosyl transferase group 1 TERM 821 1098256 - 1098229 - g 75 -14.2 -2.73994 | gap 1, opp_overlap 1098231, overlap 1098226 ATGGCGTGAAGACCA TCGCTCTGCCGCC GGT GACGGCAG-GCGA CAAGGGCTTTTCGGG Smed_4598 1098063 - 1099217 + | glycosyltransferase family 28 protein Smed_4599 1099955 - 1099281 - | hypothetical protein Smed_4600 1100303 - 1103014 + | ABC transporter related Smed_4601 1103111 - 1103575 + | cyclic nucleotide-binding protein TERM 822 1103662 - 1103678 + F 80 -4.4 -4.89393 | overlap 1103659 CATTCCCTCCGGCGG GAACGG CGCTC TCGTTC TTTTTGTCGCATTTC TERM 823 1103818 - 1103792 - g 72 -4.4 -4.57073 | overlap 1103779 TATTTTCCCGAAAAA CCGGAAAAAG CGCGTTT CTTTCGCCGG CTGCAGGCCGGTCAG Smed_4602 1103744 - 1104493 + | FkbM family methyltransferase Smed_4604 1105052 - 1106107 + | periplasmic binding protein/LacI transcriptional regulator Smed_4605 1106104 - 1107126 + | extracellular solute-binding protein Smed_4606 1107162 - 1108043 + | binding-protein-dependent transport systems inner membrane component Smed_4607 1108040 - 1108819 + | binding-protein-dependent transport systems inner membrane component TERM 824 1109594 - 1109619 + G 71 -13.3 -3.06796 | gap 1 GATCGCGCTTGCCAT GCCCTTGCCGCA TGA TGCGGCG-GGGC TTGCCTGGCGTCCGC TERM 825 1109626 - 1109684 + G 77 -15.5 -2.60032 | gap 2, overlap 1109628 CGGCGGGGCTTGCCT GGCGTCCGCGCATGGTGACCCTGGGGT CAGGTCC GTTCCAGGGT-ACCGTGCGTGGA-GCC GCTTTTTCCGGCAGC Smed_4608 1108812 - 1109840 + | ABC transporter related TERM 826 1109879 - 1109904 + G 70 -10.5 -3.61715 | gap 1, overlap 1109892 CACGGATATGGGTTT CGACGA-CATCG CCG CGGTGCTCGTCG TTCTTCACGCCGCTG TERM 827 1109923 - 1109943 + G 72 -7.5 -4.11371 | overlap 1109892 TTCACGCCGCTGAGA CGATCGACG GGG TGTCGCTCG TTTTCGGCAATGTTC Smed_4609 1109847 - 1110770 + | inosine/uridine-preferring nucleoside hydrolase TERM 828 1110818 - 1110849 + G 73 -10.8 -3.58522 | gap 1, opp_overlap 1110802 GCCGGCTTGCGCGCG CGCGCTGTCGCCGCG GCA CGCGGTGAT-GCGGG TTTCGACGTGCTCGT TERM 829 1111360 - 1111327 - g 73 -12.5 -3.16564 | gap 1 CGCCGAGGTCATGAA CATGCGCGGCATCATC GAC GGCGAT-CCGCGCATG AGTGCGATCGTCGAG Smed_4610 1110767 - 1112548 + | adenine deaminase Smed_4611 1112598 - 1113002 + | hypothetical protein TERM 830 1113016 - 1113033 + T 79 -6.9 -4.56597 | opp_overlap 1113014 1113016, overlap 1113006 AGCGCGCGAACAATA GCTTCGC CTTT GCGATGC TTTTTGCAGGCGGGA Smed_4612 1114271 - 1113102 - | amidohydrolase TERM 831 1114872 - 1114841 - g 82 -5.7 -4.82901 | opp_overlap 1114841, overlap 1114825 GCCGGGCCAGAAAAA GCGGCTCTATGCG GACCCG CGCATGCTGCCGC TCTTGAGAAACCGCA Smed_4613 1114422 - 1115123 + | phosphoribosyltransferase Smed_4614 1115652 - 1115185 - | hypothetical protein TERM 832 1116488 - 1116461 - g 70 -10.6 -3.61894 | gap 1, opp_overlap 1116471, overlap 1116449 1116483 AATCGCGTTGAAGAA CGCCGGCATCGTC GTC GACAAC-CCGGCG ACTCTGGTCGGCCTC TERM 833 1117013 - 1117056 + G 76 -10.9 -3.75153 | gap 1, opp_overlap 1117042, overlap 1117015 ACTCTTCATTTCGCC GC-TCGCGGCCGCCGTTCCG ACTTA TGCAACGGCGCCCGCGCTGC TTTACGTTGCCGGCC Smed_4615 1116012 - 1117304 + | xanthine/uracil/vitamin C permease Smed_4617 1117939 - 1118457 + | kinase-like protein TERM 834 1118723 - 1118692 - T 71 -7.8 -4.03234 | opp_overlap 1118691 1118688, overlap 1118696 TGCTCGTCACAGAAA TCCAGCAGCGCCGC GTCT GCGGCGCGGGAAGA GTTCTTTCAGCCCAA Smed_4618 1120319 - 1118904 - | chitin deacetylase TERM 835 1120078 - 1120064 - G 73 -8.5 -4.07568 | opp_overlap 1120066, overlap 1120065 GTCTCTCGGTGAAAA GGCGG TGCAG CCGCC AGAAGCCGGCGCGCG Smed_4619 1120487 - 1120858 + | hydroxyisourate hydrolase Smed_4620 1120864 - 1122345 + | xanthine dehydrogenase small subunit Smed_4621 1122359 - 1124692 + | xanthine dehydrogenase molybdopterin binding subunit Smed_4622 1124728 - 1125585 + | xanthine dehydrogenase accessory protein XdhC Smed_4623 1126617 - 1125670 - | LysR family transcriptional regulator TERM 836 1125970 - 1126009 + g 72 -13.6 -2.80699 | overlap 1125966 ATAGGGCCCGGCGAC TTCGAACTTGCGGACGCC ATCC GGCGTCTGCAAGGTCCAG TAATATTCCTTCGAC TERM 837 1126315 - 1126351 + g 84 -11.5 -4.16016 | overlap 1126316 CAGGCGGCGGCCGAT ACCGAGCGGAGCGGTGA TCT TCAGCGCTCCCTTCGGA TTTCTTGAAAGATCG TERM 838 1126316 - 1126350 + g 78 -15 -3.09288 | overlap 1126315 AGGCGGCGGCCGATA CCGAGCGGAGCGGTGA TCT TCAGCGCTCCCTTCGG ATTTCTTGAAAGATC TERM 839 1127006 - 1126968 - g 71 -8.1 -3.95787 | gap 1, opp_overlap 1126970 1126973, overlap 1126960 1126970 TACCACATCCAGAAA TATCTGGTGGCGCCGGCA AACA TGCCGGAGC-ACCTGATC TGGTTCAAATGGGAA TERM 840 1127004 - 1126970 - g 73 -10.7 -3.56568 | gap 1, opp_overlap 1126970 1126973, overlap 1126960 1126968 CCACATCCAGAAATA TCTGGTGGCGCCGGCA AACA TGCCGGAGC-ACCTGA TCTGGTTCAAATGGG TERM 841 1127385 - 1127372 - g 71 -8.1 -3.8917 | CCCGAACCAGAAGAA GGTCG TTGC CGACC TGATCGCAGGCCGCA Smed_4624 1126767 - 1128005 + | hypothetical protein Smed_4625 1128002 - 1129345 + | guanine deaminase TERM 842 1129502 - 1129491 - T 84 -7.2 -4.86731 | CCTGCGGAAAGAAAA CGCC GACA GGCG GTTGGGGGGCTGCCG TERM 843 1129619 - 1129639 + T 71 -7.5 -4.23007 | overlap 1129620 1129622 TTCAGTGCCGTCGGC ATACGCAGC TAC GCTGCGTGC TTTTCGCCTTCTATC Smed_4626 1130106 - 1129627 - | heat shock protein Hsp20 Smed_4627 1130430 - 1130735 + | hypothetical protein Smed_4628 1132810 - 1130756 - | penicillin-binding protein 1C TERM 844 1132191 - 1132220 + g 82 -11.3 -4.09739 | overlap 1132189 TTGCGGGCCGCCTCG GCGGCCGCCAGAT TGCG GTCGGGCCGCCGC TTTTCCGGCAATTGC TERM 845 1133451 - 1133485 + H 72 -9.3 -3.71378 | gap 1, opp_overlap 1133437 1133451, overlap 1133451 ACGCATCGCCAGTAA T-GCGCGCGGCGTAGC TGCC GCTACGTTGGGCGCCA TTTACATCTAACCTC TERM 846 1136402 - 1136425 + H 79 -13.8 -3.02144 | opp_overlap 1136420 TGGCCGCCGAGCTTG CCGCCGTCGC TGAC GAGACGGCGG TCTTCAACGCCGTCG Smed_4630 1138567 - 1139322 + | DeoR family transcriptional regulator TERM 847 1139462 - 1139440 - g 73 -8.4 -4.07687 | gap 1, overlap 1139426 1139443 ACCTTGCTCTGAAAA GCACGGCGG TGCACC CCGCCG-GC GCCGGCGATAACTGG Smed_4631 1139418 - 1140422 + | deoxyribose-phosphate aldolase TERM 848 1140926 - 1140939 + G 73 -3.1 -4.77036 | gap 1 TCGGCCAGGTCATCC CGTGGA ATT TCC-CG TTTTTGATGCTCGCC TERM 849 1141331 - 1141369 + G 89 -12.5 -4.18762 | gap 2, opp_overlap 1141357 GGCAGGTCTGCTGCG CTGGTTCC-CGCC-TCCTG GTG CAGGAAGGCGTGGCACCGG TTTTCCATGAACGTT Smed_4632 1140427 - 1142811 + | aldehyde dehydrogenase TERM 850 1143416 - 1143437 + G 76 -7.3 -4.34267 | gap 1 CCGAGGGGAAGCCCG CGC-CGATGT ACG GCATCGAGCG TTTTGCCTTCTATGA Smed_4633 1143097 - 1143552 + | RbsD or FucU transport Smed_4634 1143567 - 1143998 + | OsmC family protein Smed_4635 1144028 - 1144822 + | amidinotransferase Smed_4636 1146299 - 1144923 - | mercuric reductase Smed_4637 1146538 - 1147455 + | substrate-binding region of ABC-type glycine betaine transport system TERM 851 1147473 - 1147501 + F 100 -12.5 -5.27779 | gap 1, opp_overlap 1147471 TGACGTGAGGGAAGG GCGCTGGTCGGA TAAGGC TCCGACC-GCGC TTTTTTCATCTTGCG TERM 852 1147574 - 1147560 - g 81 -6.4 -4.77759 | ATAATCCAGGAAAAA GAACGC TTG GCATTC CGTTTCGACAAACTC TERM 853 1148015 - 1148040 + G 71 -9.7 -3.68351 | gap 1 TCTTGCAGGGTCAAT GCTCGTCGCCGG CCG CTGG-GACGGGC TTTCGATCATGAAGG Smed_4638 1147533 - 1148732 + | binding-protein-dependent transport systems inner membrane component Smed_4639 1148729 - 1149667 + | ABC transporter related Smed_4640 1149664 - 1150404 + | binding-protein-dependent transport systems inner membrane component Smed_4641 1150540 - 1151700 + | oxidoreductase domain-containing protein Smed_4642 1151713 - 1152597 + | binding-protein-dependent transport systems inner membrane component TERM 854 1152687 - 1152701 + G 72 -4.2 -4.58585 | overlap 1152688 AGCTTCATCCTCGCA CCCTTC GTC GAAGGC TTTCTTGTTTCGCTG TERM 855 1152719 - 1152732 + G 84 -3.7 -5.22312 | overlap 1152712 TCTTGTTTCGCTGAA GCCGC TTGG GCGCC TTTTTTCCTCTCCCT Smed_4643 1152594 - 1153451 + | binding-protein-dependent transport systems inner membrane component Smed_4644 1153481 - 1154710 + | extracellular solute-binding protein TERM 856 1154720 - 1154747 + F 87 -17 -2.84723 | opp_overlap 1154712 1154713, overlap 1154718 AAGTAAATCCCACCG GGACCGCTGGGC CTCG GCTCGGCGGTCC TCCTTCATGTTGGCG Smed_4645 1154796 - 1155929 + | ABC transporter related Smed_4646 1155932 - 1156432 + | GCN5-related N-acetyltransferase Smed_4647 1156592 - 1156975 + | glyoxalase/bleomycin resistance protein/dioxygenase Smed_4648 1158499 - 1157006 - | hypothetical protein TERM 857 1157699 - 1157713 + g 76 -10 -3.89614 | AAGGCCCAGCTCGCG GGCAAG CGC CTTGCC TTTCTCGGCCTTGCC TERM 858 1157731 - 1157757 + g 76 -9.4 -4.05033 | overlap 1157725 TCTCGGCCTTGCCGT TGGTCACGACGA GCA TCTTCGTGCCCA TTTCTGTCACGTCAC Smed_4649 1158991 - 1158506 - | hypothetical protein Smed_4650 1159107 - 1159496 + | endoribonuclease L-PSP TERM 859 1160022 - 1160051 + G 71 -9.2 -3.70511 | GCATGCAAATGATGA TGGCGGCGGCCG CACGTC CGGCCGATGTCA TTGTTGGATCGTCTT Smed_4651 1159517 - 1160380 + | RpiR family transcriptional regulator TERM 860 1160838 - 1160813 - g 71 -11.1 -3.53224 | CATCGCCTCGGTAAA CGGGATGAACG TTTT CGGCCATCCCG CCTACAGCGCCGCCA Smed_4652 1160382 - 1161176 + | short chain dehydrogenase TERM 861 1161851 - 1161868 + G 76 -5.5 -4.56597 | overlap 1161852 AGCCGAGCTCGGCGG AGAAGCC TACA GGCTTCA TTTTTCCGACGAGGA TERM 862 1162013 - 1162034 + G 74 -13.7 -2.87026 | overlap 1162003 TGTAATCGCGGACGG GCCGCGCTA CGGG TGGCGCGGC TGTCATCTCGATGTG Smed_4653 1161201 - 1163120 + | Beta-N-acetylhexosaminidase TERM 863 1163650 - 1163681 + G 71 -11.5 -3.50853 | gap 1, overlap 1163644 CCTCCGCTCGGGGAC GCGGCCCG-GCGTC GCCTG GGCGCGCGTGCCGC TTCTCCTTCCCGGAG TERM 864 1164002 - 1163982 - g 74 -4.6 -4.64766 | gap 1, overlap 1163984 CCGAGAGTGCAAAAA CGGCGCCGG TAAT CCT-CGCCG ATTCCGGCGATAACC Smed_4654 1163132 - 1164565 + | MlrC domain-containing protein TERM 865 1164595 - 1164576 - f 81 -12.1 -3.74077 | opp_overlap 1164576 TTTGAGACAGTGAAA CCGCCCG TCTTTT CGGGCGG TTTCGGCAGACCTTG TERM 866 1164576 - 1164595 + F 77 -12.1 -3.53761 | opp_overlap 1164576 TTTGAGACAGTGAAA CCGCCCG TCTTTT CGGGCGG TTTCGGCAGACCTTG TERM 867 1165693 - 1165714 + G 71 -12.9 -3.07895 | CGGTGAATATATTCC TCGGCGCCG GCCT CGGCGCCGC TCTGTTCGCGCTCGG Smed_4655 1164633 - 1165844 + | major facilitator transporter Smed_4656 1167594 - 1165915 - | urocanate hydratase Smed_4657 1168406 - 1167591 - | N-formylglutamate amidohydrolase Smed_4658 1169943 - 1168408 - | histidine ammonia-lyase Smed_4659 1171187 - 1169940 - | imidazolonepropionase TERM 868 1170587 - 1170603 + g 70 -10.1 -3.5627 | CCGGCAGGACGACCT CGGCGAT GTA GTCGCCG TTTCGGCCCTGATAT TERM 869 1171302 - 1171323 + r 71 -11.5 -3.28712 | opp_overlap 1171302 CAGAAGCACAAAGAA GCCCCGAAC TCCC GTCCGGGGC TTGTCGAGAGGACCG TERM 870 1171323 - 1171302 - R 95 -13.7 -4.16837 | opp_overlap 1171302 CAGAAGCACAAAGAA GCCCCGAAC TCCC GTCCGGGGC TTGTCGAGAGGACCG Smed_4660 1172592 - 1171408 - | major facilitator transporter TERM 871 1172176 - 1172137 - G 93 -19.2 -3.31144 | GCGCCATCCCCAGAA GGCGGCGATCAGCGCGCC CAGA GGCGCGCCCAGCGCCACC GCGAACGTGGTGCCG Smed_4661 1172681 - 1173052 + | regulatory protein ArsR Smed_4662 1173685 - 1173098 - | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Smed_4663 1174821 - 1173682 - | phosphonate metabolism protein PhnM Smed_4664 1175530 - 1174823 - | hypothetical protein TERM 872 1174940 - 1174924 - G 75 -12.3 -3.57561 | opp_overlap 1174923 GCGCAATCGTCGAAA CGGCAAG CCG CTTGCCG ATAAATTCGGCGAAC Smed_4665 1177380 - 1175869 - | phosphonate ABC transporter, inner membrane subunit Smed_4666 1178352 - 1177390 - | phosphonate ABC transporter, inner membrane subunit TERM 873 1177839 - 1177825 - G 85 -3.4 -5.25803 | AATGGCCAGAAAAAA GCCGGC GAT GACGAC TTCCGGAAAGGCGCG TERM 874 1178419 - 1178398 - R 80 -2.1 -5.1861 | overlap 1178401 CGGATGAGGAAAAAA TGAGTGCGA TTTT CCGCCCGCA TGCCGCTGAGCAGGC TERM 875 1178487 - 1178462 - R 100 -18.3 -3.46602 | CGCCCGATAGTAGAA CGCCGACCGCC ACAA AGCGGTCGGCG CAGGATCATGGCTTT Smed_4667 1179413 - 1178508 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 876 1178608 - 1178587 - G 72 -7.2 -4.11751 | overlap 1178577 1178590 ACGAAGCCGGTAAAA TCACCGCC CTGGAT GGCGGAGA AGCAAGCGGCGTCGG Smed_4668 1180403 - 1179501 - | phosphonate ABC transporter, ATPase subunit Smed_4669 1181635 - 1180511 - | FAD dependent oxidoreductase Smed_4670 1182667 - 1181714 - | LysR family transcriptional regulator TERM 877 1182357 - 1182381 + g 73 -11.4 -3.53811 | overlap 1182358 GCATGGATATTGAGA TGGCCGGTGA TCTCT TCGCCGGCCG TTTCGAGAACATGCG TERM 878 1182426 - 1182442 + g 72 -4.3 -4.58283 | opp_overlap 1182436, overlap 1182428 GCTGCGAAGATATCG CGGCACT GAA GGTGCAG TTTTTCACCGGCTTC TERM 879 1183550 - 1183526 - g 70 -9.9 -3.56092 | overlap 1183527 CGATCACGGGGGAAA TCGTCCTCGAC AAT GTCGAGGTCGG CGAGGAGGCGCTGCT TERM 880 1183549 - 1183527 - g 72 -13.4 -2.73441 | overlap 1183526 GATCACGGGGGAAAT CGTCCTCGAC AAT GTCGAGGTCG GCGAGGAGGCGCTGC Smed_4671 1182856 - 1184043 + | acyl-CoA dehydrogenase domain-containing protein Smed_4672 1184052 - 1185233 + | L-carnitine dehydratase/bile acid-inducible protein F Smed_4673 1187298 - 1185403 - | heat shock protein 90 TERM 881 1185794 - 1185820 + g 81 -4.3 -5.0538 | gap 1, opp_overlap 1185770 1185771, overlap 1185796 GCGACACCCGCTTCC G-CCGAAGCGGC GGCT GCCGCATCGTTC TTTTTTGCGATGCCC TERM 882 1185796 - 1185817 + g 95 -11.5 -4.63089 | opp_overlap 1185770 1185771, overlap 1185794 GACACCCGCTTCCGC CGAAGCGGC GGCT GCCGCATCG TTCTTTTTTGCGATG TERM 883 1187813 - 1187866 + G 73 -13.2 -3.22774 | gap 3, opp_overlap 1187848, overlap 1187810 1187816 GACGAGCTCATGCGA GAGGTGGCCG--CCGCCGCTTCGGGTC TTA GAACCGA-GCGGCGGATCAGCCACGTC TTCGTGATGGATGTG TERM 884 1187816 - 1187863 + G 71 -13.5 -2.50195 | gap 3, opp_overlap 1187848, overlap 1187810 1187813 GAGCTCATGCGAGAG GTGGCCG--CCGCCGCTTCGGGTC TTA GAACCGA-GCGGCGGATCAGCCAC GTCTTCGTGATGGAT Smed_4674 1187462 - 1188418 + | phosphate acetyltransferase Smed_4675 1188420 - 1189595 + | acetate kinase Smed_4676 1191098 - 1189623 - | succinic semialdehyde dehydrogenase TERM 885 1191112 - 1191140 + r 100 -14.5 -3.79841 | ACGCAACGTCCTCCC GCGATGCCTGCGG CGG CCGCAAGCCTCGC TTCTCTTCCTTGTTA Smed_4677 1192484 - 1191216 - | 4-aminobutyrate aminotransferase TERM 886 1192115 - 1192069 - G 74 -10.1 -3.73775 | gap 2, overlap 1192070 1192084 1192085 GCCATGCCCATGAAA GTGCGGCCATGGAAACCGCCGCC GAA GGCGACGATCGCC-TGGCGGC-C GGTCGCGGCGCGCGC TERM 887 1192116 - 1192084 - G 70 -10.6 -3.64703 | gap 2, overlap 1192069 1192070 1192085 GTGCGGCCATGGAAA CCGCCGCCGAAGGCGA CGA TCGCC-T-GGCGGCCG GTCGCGGCGCGCGCG Smed_4678 1192719 - 1193549 + | MerR family transcriptional regulator Smed_4679 1193844 - 1194977 + | acyltransferase 3 Smed_4680 1194993 - 1196096 + | glycosyl transferase family protein Smed_4681 1196098 - 1197135 + | glycosyl transferase family protein Smed_4682 1197145 - 1198938 + | ABC transporter related TERM 888 1198935 - 1198975 + T 81 -9 -4.28375 | opp_overlap 1198940, overlap 1198940 CGCGGACAGCGCAAC GTAAACTCCCCATGTGGC CCTCC GCGAGATGGGGAGTTGGC TTTTGCATGTCTTCC TERM 889 1198970 - 1198940 - T 72 -9.7 -3.76393 | opp_overlap 1198940 1198935 ACAGCGCAACGTAAA CTCCCCATGTGGC CCTCC GCGAGATGGGGAG TTGGCTTTTGCATGT Smed_4683 1200046 - 1199003 - | fructose-1,6-bisphosphate aldolase Smed_4684 1200489 - 1200725 + | hypothetical protein TERM 890 1201198 - 1201173 - g 74 -11.9 -3.40403 | GGCCGTCGACGAGAA GACGCTCGAAG TCAC CCTCGAACGTC CGACGCCTTTCTTCC Smed_4685 1200706 - 1202304 + | extracellular solute-binding protein TERM 891 1202344 - 1202309 - f 100 -22.6 -3.39895 | TCGCCGAGTAACGAA CAGAGGCGACGCGCGG GCAT CTGCGCGTCGCCTCCG GAGCCAAATCCATGA Smed_4686 1202356 - 1203279 + | alkaline phosphatase Smed_4687 1203272 - 1204402 + | binding-protein-dependent transport systems inner membrane component TERM 892 1204581 - 1204564 - g 71 -8.5 -3.92659 | overlap 1204558 CGGGCAAAAGCCAAA CCATGAT GGGT ATCATGG GCCTGCTCGCCAACA Smed_4688 1204404 - 1206005 + | ABC transporter related Smed_4689 1207495 - 1206152 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 893 1207048 - 1207065 + g 81 -7.7 -4.43576 | gap 1 GATCCACCATCGCTT GGCT-CCG CCC CGGCAGCC TTTGTTCTATGTCGT Smed_4690 1209312 - 1207492 - | integral membrane sensor signal transduction histidine kinase TERM 894 1209173 - 1209155 - G 85 -14.6 -3.55071 | overlap 1209167 TGATAGCGGTTCAAA TGGCCGCT AAG AGCGGCCA CCGCCAGTCGCAGCG Smed_4691 1209596 - 1210528 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 895 1210691 - 1210677 - g 71 -8.5 -3.89617 | ATGCATAAATTGAAA GCCGG CAGTC CCGGC GGACCCATCCTTTTC Smed_4692 1210644 - 1211246 + | phospholipase/carboxylesterase Smed_4693 1211325 - 1211567 + | prevent-host-death family protein Smed_4694 1211619 - 1211948 + | PilT domain-containing protein TERM 896 1211925 - 1211940 + T 71 -8.2 -4.09455 | GTTGTTAGCCGCTAC CCCGGT CCTA GCCGGG TTGTTTAGTCTTCAT Smed_4695 1213064 - 1211952 - | ABC-2 type transporter TERM 897 1212322 - 1212302 - G 85 -10.3 -4.34345 | CATAGAGCAGGAAAA GCGAACCGC GCA GCGGCACGC CGAACACGAAAACCG Smed_4696 1214220 - 1213066 - | ABC-2 type transporter TERM 898 1213293 - 1213274 - G 77 -2 -5.08255 | overlap 1213288 ATCTCGAAAAGAAAA CCGGAC AGCAGAAA GGCCGG CAGAAAGGCCGAGAT Smed_4697 1215965 - 1214217 - | ABC transporter related TERM 899 1214804 - 1214781 - G 86 -16 -3.12351 | GCGCCTGAGATCGAA GCCGGCGACG CGGC CGTCGCCAGC GGTCGGCGTCAGAAG Smed_4698 1216969 - 1215965 - | hypothetical protein TERM 900 1216609 - 1216664 + g 86 -13.9 -3.87815 | overlap 1216610 GCTCGGCGAGGCGTT CCTCGTGGGTGGCGCGCGC-CTGAGCG ATTT CGC-CGGCGCGCGCGCCGGCCTTGAGC TTTGTCAGGGTCGCC TERM 901 1216610 - 1216663 + g 87 -17.4 -2.92475 | overlap 1216609 CTCGGCGAGGCGTTC CTCGTGGGTGGCGCGCGC-CTGAGCG ATTT CGC-CGGCGCGCGCGCCGGCCTTGAG CTTTGTCAGGGTCGC TERM 902 1216949 - 1216961 + g 73 -3.4 -4.72272 | opp_overlap 1216949 GGCGAGGATTACAAC GATC AAGGC GATC TTTTTCATGAACGGC Smed_4699 1217670 - 1216966 - | TetR family transcriptional regulator TERM 903 1217648 - 1217662 + g 72 -2.7 -4.7497 | CCTCTAGGTATTGTG GGTCG GTTGG CGTCC TTTTTCATGCCTGGA TERM 904 1217717 - 1217685 - H 78 -14.3 -2.59431 | opp_overlap 1217674, overlap 1217681 TGCCTGGAGAATGCA CCATTCGATCGAATG AGT CAATCGATCGAATGA AAAAGCTGGCAATCC Smed_4700 1217856 - 1218248 + | glyoxalase/bleomycin resistance protein/dioxygenase Smed_4701 1218387 - 1218767 + | hypothetical protein Smed_4702 1218971 - 1219630 + | bis(5'nucleosyl)-tetraphosphatase, ApaH Smed_4703 1219795 - 1220469 + | HAD family hydrolase Smed_4704 1221498 - 1220545 - | hypothetical protein Smed_4705 1222864 - 1221542 - | glycosyl transferase group 1 TERM 905 1222186 - 1222208 + g 79 -9 -4.18018 | GATCGCGTATCGGGG CGGCTTCGCC CAA GACGATGCCG TTTTCGATCACGGAG TERM 906 1222679 - 1222657 - G 72 -7.6 -4.18018 | CGTCCGCATGGAAAA GCACCTCGTC CAC GGCGAGACGC AGGCTCATGAGGGCT Smed_4706 1225068 - 1222861 - | hypothetical protein TERM 907 1223454 - 1223438 - G 74 -12.3 -3.40112 | overlap 1223436 AGCAGATCGTAAACA TCGTCGG TTT CCGACGA CATCAGCCTGAGCGA Smed_4707 1225786 - 1225079 - | putative membrane-anchored protein TERM 908 1225443 - 1225460 + g 73 -3.3 -4.67982 | gap 1, opp_overlap 1225420, overlap 1225443 1225444 GCCGCCTGCTCGTCC G-GGCGCG GAA CGCGCAAC TTTTGTTCCGTGCCG TERM 909 1225686 - 1225732 + g 73 -8.7 -3.98159 | gap 2, opp_overlap 1225679 1225693 GGATCGAAGGCCCAG CCGAAGATGCGCCCCTGGTCGAT CGC GTCGACCCGGC-CGC-TCATCGG TTTCGTGTTGTCCTG Smed_4708 1227054 - 1225798 - | glycosyl transferase group 1 Smed_4709 1227902 - 1227057 - | methyltransferase type 11 Smed_4710 1230148 - 1227899 - | glycosyl transferase family protein TERM 910 1228387 - 1228410 + g 71 -11 -3.42482 | gap 1, opp_overlap 1228384 1228387, overlap 1228385 CGTCCTCGAAGATCA GCTTCGG-GCC GAT GGCGCCGAGGC TCTTCTGTTCCATGA TERM 911 1228910 - 1228954 + g 70 -7.8 -4.07568 | gap 1, overlap 1228911 GCGCAGGATGCGGTT GCGCT-GCGCCGAAGCTTCGA AGGG TTGTGGCTTCGGCACGAGCGG TTTTACGACGCCGGA TERM 912 1230028 - 1230040 + g 100 -4.8 -5.46657 | overlap 1230026 CGAGCCTGTGTTTTG CTGC GGCCG GCAG TTTTTTCTTGAGGTC TERM 913 1230205 - 1230173 - R 79 -13.4 -3.05384 | overlap 1230175 CTCTGCTGCAGGGAA GACGCGCCCCGC GGGAGGAGG GCAGGGCGCGCC GTTCAAAGTCAAAGC TERM 914 1230203 - 1230175 - R 73 -12.4 -3.08679 | overlap 1230173 CTGCTGCAGGGAAGA CGCGCCCCGC GGGAGGAGG GCAGGGCGCG CCGTTCAAAGTCAAA TERM 915 1230248 - 1230229 - R 77 -10.8 -3.91072 | TCAAAGCGGGATAAA GAAAACCG CCTG CGGTTTTC GGCCTGCGTCCCGCG Smed_4711 1230933 - 1230274 - | putative secreted calcium-binding protein Smed_4712 1232628 - 1231207 - | HlyD family type I secretion membrane fusion protein Smed_4713 1234394 - 1232625 - | type I secretion system ATPase TERM 916 1233204 - 1233170 - G 82 -6.2 -4.82901 | opp_overlap 1233194, overlap 1233172 1233173 1233195 TGCCGTCCAGAAAAA CACCGCCGGCAGTCGG CTT CAGAATGCCGGTGAGG AGCCGCGCCAGCGTG TERM 917 1233202 - 1233172 - G 70 -7.4 -4.03995 | opp_overlap 1233194, overlap 1233170 1233173 1233195 CCGTCCAGAAAAACA CCGCCGGCAGTCGG CTT CAGAATGCCGGTGA GGAGCCGCGCCAGCG TERM 918 1233653 - 1233678 + g 73 -8.9 -4.07568 | gap 1, overlap 1233653 CTTCCAGCACGCTCA G-GGCGTGCAGC TGA GCGGCGCGCCAC TTTTGGGAGAGCGCC TERM 919 1233910 - 1233887 - G 100 -9.5 -4.9218 | overlap 1233900 GATGCAGCAGAAAAA GGACGCCCA GAAAGA TGGGCGACC AGGCCGCGTCGAGCG Smed_4714 1234615 - 1235175 + | MarR family transcriptional regulator Smed_4715 1235316 - 1236563 + | glycosyl transferase group 1 Smed_4716 1236732 - 1238213 + | putative membrane-anchored protein TERM 920 1238937 - 1238904 - g 74 -11.7 -3.53224 | gap 1, opp_overlap 1238904 1238905, overlap 1238905 GAGCTTCCTCCGAAA GCGCCACAGGGCGCTG TTC CAGCGCCCCAT-GCTC GTCGATTTCGAGCAT TERM 921 1239270 - 1239307 + G 78 -3.5 -4.9725 | gap 3, opp_overlap 1239259 CGAACCGGTCTTCCT TGAGG-CCGGCGCCCAGC ATAAC GCTT--CGCCGGACCTCA TTTTTCTGTCCACAT Smed_4717 1238200 - 1240881 + | glycosyl transferase family protein TERM 922 1241126 - 1241142 + G 70 -10.1 -3.66178 | opp_overlap 1241126 CCCGCATGCGAAGCA GGTGCCG TTT TGGCACC TTTACAATTGCAGCC Smed_4718 1240917 - 1242095 + | polysaccharide pyruvyl transferase TERM 923 1242567 - 1242552 - gf 71 -4.6 -4.41047 | overlap 1242554 AGGGCTCAAGGAAAA CCTGCC TCCC GGCACG CTCAAGTTCCTTGAG Smed_4719 1242136 - 1243308 + | polysaccharide pyruvyl transferase TERM 924 1243825 - 1243838 + GF 76 -5.9 -4.56597 | opp_overlap 1243813 1243825 CTACGCCGGATATAA CGGCG ACCT TGCCG TTTTTCGCAAACCGG Smed_4720 1243283 - 1244467 + | hypothetical protein TERM 925 1244516 - 1244530 + G 77 -12.8 -3.55444 | TCATCCTTGCAGGCG GCCGGG GAA CCCGGC TTTACCCCGTGACGA TERM 926 1244984 - 1244973 - g 76 -7.2 -4.28994 | GACGATCGAGGAAAA GCCC GCGC GGGC ACGATCGAGCTGGGC TERM 927 1244997 - 1245010 + G 74 -5.2 -4.62441 | GGCACGATCGAGCTG GGCC GTGACA GGCC TTTATTTCTATGAAA Smed_4721 1244464 - 1245372 + | glucose-1-phosphate thymidylyltransferase Smed_4722 1245365 - 1245928 + | dTDP-4-dehydrorhamnose 3,5-epimerase Smed_4723 1245940 - 1247010 + | dTDP-glucose 4,6-dehydratase Smed_4724 1247007 - 1247909 + | dTDP-4-dehydrorhamnose reductase Smed_4725 1248724 - 1247906 - | putative Sir2-like transcriptional silencer protein Smed_4726 1248967 - 1248797 - | exported peptide protein Smed_4727 1249182 - 1249391 + | CsbD family protein TERM 928 1249403 - 1249426 + F 91 -16.8 -3.53224 | GTGACGAGCGGGACG GAGATCCCGC CAGA GCGGGATCTC TTTCCCAAACCGATC TERM 929 1249498 - 1249485 - g 81 -3.7 -4.99043 | opp_overlap 1249490, overlap 1249486 GCCCCACAAAGAAAA GGCGC TCTC GCGCG ACGAGGATTATCGCG Smed_4728 1249462 - 1249959 + | transport-associated Smed_4729 1249996 - 1250367 + | hypothetical protein Smed_4730 1250559 - 1251248 + | hypothetical protein TERM 930 1251283 - 1251311 + T 100 -11.7 -5.26316 | gap 1, opp_overlap 1251274, overlap 1251266 GACAGACCTGATTCA GGGTCCGC-CGG CTTTTT CCGGGCGGGCCC TTTTTTCTGCCCTCC Smed_4731 1252442 - 1251363 - | hypothetical protein TERM 931 1252213 - 1252237 + g 76 -9.2 -4.07687 | opp_overlap 1252185 ACGGTCGCCGCGGCT GCTGCGTCCG GATAG CGGAAGCGGC TTTTGACCCGGCGAT Smed_4732 1252737 - 1253618 + | helix-turn-helix domain-containing protein Smed_4733 1253745 - 1254404 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Smed_4734 1254408 - 1255394 + | molybdopterin dehydrogenase FAD-binding TERM 932 1257428 - 1257416 - g 83 -4.8 -5.08824 | opp_overlap 1257427 CCCTGATGGAAAAAA CCGT GCTCG ACGG CCGCTACGGACATTT Smed_4735 1255417 - 1257693 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Smed_4736 1258658 - 1257810 - | phytanoyl-CoA dioxygenase TERM 933 1258497 - 1258455 - G 74 -14.1 -2.88663 | gap 2 ATGGATCTCCACATA CCAGCGGCGCGGCCCGCGACC GAC GG-CGCCGCCCG-GCCGCTGA ATGGCCGACCAGAAG Smed_4737 1259696 - 1258704 - | monosaccharide-transporting ATPase Smed_4738 1260713 - 1259709 - | monosaccharide-transporting ATPase Smed_4739 1262208 - 1260715 - | ABC transporter related TERM 934 1262306 - 1262269 - R 100 -18.5 -3.10715 | opp_overlap 1262256 CGCAGGATCACCGAA CCCGTTGATCGGCCGGC ATGG GCCGGCCGATCAAGAAG GATGTCAGTACGCGT Smed_4740 1263294 - 1262311 - | periplasmic binding protein/LacI transcriptional regulator TERM 935 1263395 - 1263367 - H 78 -6.2 -4.70659 | gap 2, overlap 1263383 CTTCACACGGAAAAA CCTTG-C-GCTAAT ATT ATTAGCAGTCAAGG CTAAAGTTATTAGCA Smed_4741 1263518 - 1264570 + | periplasmic binding protein/LacI transcriptional regulator Smed_4742 1264954 - 1264619 - | cupin 2 domain-containing protein Smed_4743 1265728 - 1264964 - | 2-deoxy-D-gluconate 3-dehydrogenase Smed_4744 1266570 - 1265725 - | 5-keto-4-deoxyuronate isomerase TERM 936 1266090 - 1266075 - G 86 -7.6 -4.77896 | GAATGAACTGAAAAA TCGAAC GCTC GTTCGA TGTGGCCGCACTTCC TERM 937 1266390 - 1266346 - G 71 -8.5 -3.85698 | overlap 1266347 GCGCCGCTCGAGAAA GCGCGCCGTCCCGGTCG-GGC GGATG GCCTCGAGCGGTAGGG-GCGC GTCGACAGGCATTGC Smed_4745 1267437 - 1266688 - | GntR domain-containing protein Smed_4746 1268729 - 1267446 - | TRAP dicarboxylate transporter, DctM subunit Smed_4747 1269294 - 1268734 - | tripartite ATP-independent periplasmic transporter DctQ TERM 938 1269475 - 1269431 - R 74 -13.7 -2.64293 | opp_overlap 1269439, overlap 1269430 1269428 GCGGCAATACAAGAG GTTAGAGAGCTTCCGCAATTC GGA GAAAAGCGGAAACTCTCTAAA GCGTCACTGTACCGC Smed_4748 1270456 - 1269479 - | TRAP dicarboxylate transporter, DctP subunit Smed_4749 1271897 - 1270488 - | glucuronate isomerase TERM 939 1271951 - 1271985 + H 74 -8 -4.15222 | opp_overlap 1271958 CCTGTAAATTCACTT GTCAACATACAAACTT CGT GAATTTGTATGATGAC TTTCTTGCCGCGCAT TERM 940 1272706 - 1272717 + G 70 -7.2 -4.07568 | GAAGACCTGGCAATG GCGG CAAT CCGC TTTTCAAGCGGCGCA Smed_4750 1272052 - 1273071 + | oxidoreductase domain-containing protein Smed_4751 1273223 - 1274215 + | putative ribonuclease BN Smed_4752 1274319 - 1274603 + | hypothetical protein Smed_4753 1274686 - 1275186 + | hypothetical protein Smed_4754 1275198 - 1275638 + | hypothetical protein Smed_4755 1275783 - 1276769 + | putative ribonuclease BN Smed_4756 1278321 - 1276777 - | putative membrane-anchored oxidoreductase TERM 941 1277312 - 1277323 + g 70 -7.2 -4.08216 | opp_overlap 1277302, overlap 1277305 GAAAGGGCGTAGTCG GGCG CGAC CGCC TTTTCGACCAGGTCC TERM 942 1277960 - 1277985 + g 75 -12 -3.54543 | opp_overlap 1277967 TCACCATGGGCCATG GACATGATCC AGCCAC GGATCATGTC TTTCGGCCGCTCGAT Smed_4757 1278767 - 1278318 - | hypothetical protein Smed_4758 1278946 - 1279536 + | hypothetical protein Smed_4759 1279527 - 1280648 + | cytochrome c class I protein Smed_4760 1280645 - 1281628 + | cytochrome c oxidase subunit II TERM 943 1282227 - 1282217 - g 83 -6.8 -4.92756 | AGCAGCAAAAAGAAA TCGC TGC GCGA CATCGGCTGGGCGAC TERM 944 1282539 - 1282568 + G 75 -4.2 -4.78572 | overlap 1282540 GATTCGAGGCCTTTG CCGCCCTGATTG CGATCA CAGTCACGGCGA TTTTCTTCATTGGCC Smed_4761 1281635 - 1282708 + | sodium/calcium exchanger membrane region TERM 945 1284247 - 1284237 - g 73 -8.2 -4.09243 | TAGAGCGGTCGAAAA CCCC TGG GGGG CGGGTACGCTCGAAT TERM 946 1284480 - 1284501 + G 100 -17.3 -4.78107 | overlap 1284464 ATGGCCGCCTTTTCT CGCGGCCGT CTTT ACGGCCGCG TTTTTCCTGCTGCTG TERM 947 1284671 - 1284634 - g 71 -9.7 -3.81539 | opp_overlap 1284659, overlap 1284659 ATCGAAATAGCGAAA GGCGTCCGGCTGCCCAC CTAT ATGAGCGGCCCGACGTC GCATTCCTGGTGGGC TERM 948 1284778 - 1284835 + G 83 -16.3 -2.82742 | gap 3, overlap 1284796 1284828 TCGCCGGAGGTCTGG GCGCCAGCCGGATCTCCGGCGCC-GCCG CCGAT CGGCTGGC-CCGCCGGTTCGGC-GGCGC TGCTTCTCGCAGGCT TERM 949 1284796 - 1284838 + G 91 -17 -3.29511 | gap 1, overlap 1284778 1284828 CCAGCCGGATCTCCG GCGCCGCCGCCGA-TCGGC TGGCCC GCCGGTTCGGCGGCGCTGC TTCTCGCAGGCTCCG Smed_4762 1282708 - 1285230 + | cytochrome c oxidase subunit I type Smed_4763 1285236 - 1285607 + | hypothetical protein Smed_4764 1286648 - 1285611 - | periplasmic binding protein/LacI transcriptional regulator Smed_4765 1288102 - 1286822 - | tagatose-6-phosphate kinase Smed_4766 1289046 - 1288105 - | ribokinase-like domain-containing protein TERM 950 1289001 - 1288951 - G 70 -11.8 -3.17075 | gap 1, opp_overlap 1288964 TGCGCCGGAAGGGAA GGGACCGATGAGGGGCGTCGCCT GCCGGA AGCCGTCGCCTCTC-TCGGTCGC GACGATCTCGACGAG Smed_4767 1290032 - 1289070 - | monosaccharide-transporting ATPase TERM 951 1289958 - 1289940 - G 83 -7.4 -4.56133 | overlap 1289943 GTTGAAGAAGGAAAA GACGATGC AGA GCATCACC AGGGATAGGAAGATG Smed_4768 1291540 - 1290029 - | ABC transporter related TERM 952 1290598 - 1290608 + g 88 -8.2 -4.72272 | overlap 1290592 1290606 CGTTGAGACGCACAG CGCC GCT GGCG TTTTTCATGCCGAAG TERM 953 1291605 - 1291558 - R 90 -15.7 -3.53012 | opp_overlap 1291563, overlap 1291559 CTGTGCCTCCTTAAA CCCGACCG-GAGCGTATCCGGCC CAAC GGCCGGATACGCTTGCGGT-GTG CTGCCGCTCGAAGAG TERM 954 1291605 - 1291559 - R 86 -15.9 -2.71712 | gap 1, opp_overlap 1291563, overlap 1291558 TGTGCCTCCTTAAAC CCGACCG-GAGCGTATCCGGCC CAAC GGCCGGATACGCTTGCGGTGTG CTGCCGCTCGAAGAG TERM 955 1291563 - 1291601 + r 100 -21.9 -2.79183 | gap 1, opp_overlap 1291558 1291559 CCTCCTTAAACCCGA CCG-GAGCGTATCCGGCC CAAC GGCCGGATACGCTTGCGG TGTGCTGCCGCTCGA Smed_4769 1292532 - 1291642 - | periplasmic binding protein/LacI transcriptional regulator Smed_4770 1293111 - 1292725 - | glutathione-dependent formaldehyde-activating GFA Smed_4771 1293322 - 1293696 + | hypothetical protein Smed_4772 1294061 - 1293858 - | hypothetical protein TERM 956 1293990 - 1294008 + g 75 -3.7 -4.72986 | opp_overlap 1293990 CCCGCCGGTAGTATA GGCGGCG CCAAT TGCCACC TTTTTCGTCAAAATC TERM 957 1294869 - 1294840 - R 100 -17.3 -4.89477 | gap 1 CGTCCAAGAACAAAA GACCCGTGATC-CG GGC CGCGATCACGGGTC CAGCCGCAGCCATGT TERM 958 1294872 - 1294905 + r 72 -6.7 -4.3898 | gap 1 GCGATCACGGGTCCA GCCGC-AGCCATGTTT ACG AGGCGTGACTCGCGGC TTTTCTACAACTGCT Smed_4773 1295262 - 1294987 - | hypothetical protein Smed_4774 1295560 - 1295369 - | hypothetical protein Smed_4775 1295742 - 1296521 + | chitinase-like protein Smed_4776 1296518 - 1296940 + | hypothetical protein Smed_4777 1297160 - 1297564 + | BA14K family protein Smed_4778 1297650 - 1297955 + | hypothetical protein Smed_4779 1298019 - 1298180 + | hypothetical protein Smed_4780 1298335 - 1298721 + | transposase IS3/IS911 family protein Smed_4781 1298718 - 1299062 + | IS66 Orf2 family protein TERM 959 1299427 - 1299408 - g 71 -8.6 -3.87149 | gap 1 TCGAGGAAATTGAAA CCGGCATCG CCG CGAT-CCGG GCACAGGTCAACAAG Smed_4782 1299137 - 1300729 + | transposase IS66 Smed_4783 1300781 - 1300978 + | hypothetical protein TERM 960 1301306 - 1301333 + F 88 -15.6 -3.58726 | ACCACGTCGCGACCG GAGCTGCAGCGG TCCC CCACTGCAGCTC TTCTGTGTCAGGCCA TERM 961 1301932 - 1301946 + F 72 -5.7 -4.51196 | overlap 1301925 TGACTTAGTGGCAGT GCACT TTGCC AGTGC TTTTCTGCATTTGGC TERM 962 1303552 - 1303570 + F 72 -6.6 -4.28774 | CAGCCGAGAATGGCA CCGTGAGT TTC GCTCTCGG TTTTGGGTTGCATGA Smed_4786 1303585 - 1305144 + | lipopolysaccharide biosynthesis protein Smed_4787 1305197 - 1305964 + | ATPase involved in chromosome partitioning-like protein TERM 963 1306050 - 1306026 - g 73 -7.1 -4.26351 | gap 1, opp_overlap 1306047, overlap 1306022 GACGAAGCGAAGAAA GCGGACCGGA CTGCCC CCCGG-CCGC TCTCAGCGGTAATTG TERM 964 1306246 - 1306228 - g 85 -10.2 -4.25104 | opp_overlap 1306230 TCCGCGTGATCAAAA TGGCCCGC AAC GCGGGCTA TTCCGCCGGGATCAA TERM 965 1306230 - 1306244 + G 71 -12.8 -3.01924 | opp_overlap 1306228 CGCGTGATCAAAATG GCCCGC AAC GCGGGC TATTCCGCCGGGATC Smed_4788 1305981 - 1306928 + | glycosyl transferase family protein Smed_4789 1307260 - 1307054 - | hypothetical protein Smed_4792 1307932 - 1309020 + | feruloyl esterase Smed_4793 1309927 - 1309136 - | WecB/TagA/CpsF family glycosyl transferase TERM 966 1309686 - 1309660 - G 79 -10.9 -3.84389 | gap 1 GATCCAATAACAGAA GCCTGGCCAATC TTGA GATCGGCC-GGC TGTCGCAAAGCGAAA Smed_4794 1310194 - 1311414 + | glycosyl transferase family protein Smed_4795 1312950 - 1311520 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Smed_4796 1314446 - 1312947 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 967 1315440 - 1315398 - g 73 -11.2 -3.57462 | opp_overlap 1315401 1315408 1315409, overlap 1315409 GAGGTCACCGGCAAA CCGTGGCAAACCGCCGTTGC TTC GCAACGGCACTTTTCCGAGG GCATTCTCTACGGCG TERM 968 1315408 - 1315430 + G 70 -7.6 -4.08064 | opp_overlap 1315398 1315409, overlap 1315401 1315409 GCAAACCGTGGCAAA CCGCCGTTGC TTC GCAACGGCAC TTTTCCGAGGGCATT Smed_4797 1314819 - 1315694 + | hypothetical protein Smed_4798 1316946 - 1315756 - | hypothetical protein TERM 969 1316880 - 1316840 - G 86 -15.4 -3.65199 | gap 1 AAGTTGCCATGGAAA GACCTC-GCTTCCGCGGCG ATCG CGCCGGGGATGCTGAGGCC ACAAGCAGCCTCGGT Smed_4799 1317154 - 1318698 + | hypothetical protein TERM 970 1318875 - 1318888 + F 72 -4.5 -4.56607 | CAAAGATTTTATGTA CAGCT ATTT GGCTG TTTTCTGGTTCATGA TERM 971 1319119 - 1319170 + G 100 -10.1 -5.08255 | gap 1 CGGTCCACTCATCCT GGCCATCGTCACCGTTCTGGCG CTGCTCGTT CGCCTGGACGGCGA-GAAGGCC TTTTATTTTCAGCCT Smed_4800 1318973 - 1319653 + | undecaprenyl-phosphate galactose phosphotransferase Smed_4801 1320470 - 1319691 - | two component LuxR family transcriptional regulator Smed_4802 1322296 - 1321175 - | glycosyl transferase family protein Smed_4803 1323628 - 1322312 - | glycosyl transferase group 1 TERM 972 1322835 - 1322805 - G 86 -8.8 -4.56775 | overlap 1322807 ACCCGCGCGTAAAAA GCGACCCCGGACCG CTT CGAGGCGGGGTCCC GGCGATACAGGGCCG TERM 973 1323707 - 1323691 - H 74 -11.5 -3.59262 | GCCGACAGGCTCAAA GCGACCG TCG CGGCCGC CCGAGCGATTGCCGA Smed_4804 1324015 - 1324515 + | hexapaptide repeat-containing transferase TERM 974 1324809 - 1324798 - g 70 -7.2 -4.07568 | opp_overlap 1324804 CGTCCTCGTCGAAAA GCCG ATGG CGGC AAGTTCGGACGAAGC Smed_4805 1324517 - 1325542 + | oxidoreductase domain-containing protein Smed_4806 1325539 - 1326645 + | glutamine--scyllo-inositol transaminase Smed_4807 1326635 - 1327336 + | hypothetical protein Smed_4808 1327359 - 1328333 + | NAD-dependent epimerase/dehydratase Smed_4809 1328330 - 1329523 + | glutamine--scyllo-inositol transaminase Smed_4810 1331069 - 1329561 - | polysaccharide biosynthesis protein Smed_4811 1331995 - 1331075 - | dTDP-4-dehydrorhamnose reductase Smed_4812 1333059 - 1331992 - | dTDP-glucose 4,6-dehydratase Smed_4813 1333637 - 1333056 - | dTDP-4-dehydrorhamnose 3,5-epimerase Smed_4814 1334512 - 1333634 - | glucose-1-phosphate thymidylyltransferase Smed_4815 1335872 - 1334568 - | polysaccharide export protein TERM 975 1336514 - 1336544 + G 74 -4.6 -4.66609 | overlap 1336517 GGTCGTCATCGAGCA GGTCGAGCATGTTG CCG CAGCATGCAAGGTC TTTTTCCATCCCGTG Smed_4816 1336350 - 1337096 + | response regulator receiver protein TERM 976 1337122 - 1337134 + T 75 -10.5 -3.64716 | overlap 1337120 ATGATCGATGCATTT CGCCG GGC CGGCG TCTTTTCGGCAGTGC Smed_4817 1337843 - 1337205 - | hypothetical protein TERM 977 1338682 - 1338650 - H 77 -10.5 -3.87641 | AACAGCGTGTAGAAA CAGCCGAGATCGGCA ACG CGCCAGTCCCAGCTG GTGGTGAACAGTGCG TERM 978 1340214 - 1340168 - H 77 -11.7 -3.55946 | opp_overlap 1340183, overlap 1340170 1340171 1340182 1340183 TGATGCGAAAGAAGA TATCG-GCGCGAAAACGGCCGTC CTG GACGGCC-TTTTCGAGCTCGGCA TTGGGTCGCAAAGAC TERM 979 1340212 - 1340170 - H 76 -12.1 -3.35054 | opp_overlap 1340183, overlap 1340168 1340171 1340182 1340183 ATGCGAAAGAAGATA TCG-GCGCGAAAACGGCCGTC CTG GACGGCC-TTTTCGAGCTCGG CATTGGGTCGCAAAG TERM 980 1340211 - 1340171 - H 81 -15.6 -2.60309 | opp_overlap 1340183, overlap 1340170 1340168 1340182 1340183 TGCGAAAGAAGATAT CG-GCGCGAAAACGGCCGTC CTG GACGGCC-TTTTCGAGCTCG GCATTGGGTCGCAAA TERM 981 1340200 - 1340182 - H 80 -10.2 -4.08394 | opp_overlap 1340183, overlap 1340171 1340170 1340168 1340183 ATATCGGCGCGAAAA CGGCCGTC CTG GACGGCCT TTTCGAGCTCGGCAT TERM 982 1340183 - 1340199 + H 95 -13.7 -4.11216 | opp_overlap 1340182 1340171 1340170 1340168 1340183 TATCGGCGCGAAAAC GGCCGTC CTG GACGGCC TTTTCGAGCTCGGCA TERM 983 1340199 - 1340183 - H 79 -13.7 -3.04715 | opp_overlap 1340183, overlap 1340182 1340171 1340170 1340168 TATCGGCGCGAAAAC GGCCGTC CTG GACGGCC TTTTCGAGCTCGGCA Smed_4822 1340802 - 1341533 + | cyclic nucleotide-binding protein Smed_4825 1342428 - 1342667 + | hypothetical protein Smed_4826 1343016 - 1343819 + | two component LuxR family transcriptional regulator Smed_4827 1344258 - 1344001 - | hypothetical protein Smed_4828 1344718 - 1344443 - | hypothetical protein Smed_4829 1345037 - 1344843 - | hypothetical protein TERM 984 1345136 - 1345092 - H 82 -14.3 -2.89564 | TCGTCAGCCGAGAGA GCCTCAGCGCTGCCTAGAA GGGACAA TGCAAGGCAGCGCTGAGGA ACTCACTCACACGAG Smed_4830 1345338 - 1345733 + | response regulator receiver protein Smed_4831 1345997 - 1346149 + | hypothetical protein Smed_4832 1346146 - 1346295 + | hypothetical protein TERM 985 1346361 - 1346328 - T 88 -10.1 -4.42062 | overlap 1346330 1346331 GATTCCTGAAATAAA GACCGCCCGCGCCGG GTGA CCTGCGCGGGCACTA CGAAACAGGTTGGGG TERM 986 1346359 - 1346330 - T 87 -12.7 -3.81557 | overlap 1346328 1346331 TTCCTGAAATAAAGA CCGCCCGCGCCGG GTGA CCTGCGCGGGCAC TACGAAACAGGTTGG TERM 987 1346358 - 1346331 - T 87 -16.2 -2.88452 | overlap 1346330 1346328 TCCTGAAATAAAGAC CGCCCGCGCCGG GTGA CCTGCGCGGGCA CTACGAAACAGGTTG Smed_4833 1346577 - 1346407 - | hypothetical protein Smed_4834 1347026 - 1346574 - | hypothetical protein Smed_4835 1347147 - 1347974 + | ATP dependent DNA ligase Smed_4837 1348271 - 1348477 + | hypothetical protein Smed_4838 1348704 - 1349012 + | hypothetical protein TERM 988 1349073 - 1349041 - T 100 -13.5 -5.00616 | gap 1, overlap 1349043 CCGCTTCGGAAAAAA CG-GCCGTCAACGG ACTGAG CCGTCGACGGCACG AAGTCGCAGCATTGT TERM 989 1349070 - 1349043 - T 83 -14.9 -2.75708 | overlap 1349041 GCTTCGGAAAAAACG GCCGTCAACGG ACTGAG CCGTCGACGGC ACGAAGTCGCAGCAT Smed_4839 1349460 - 1349164 - | hypothetical protein Smed_4840 1349620 - 1349450 - | hypothetical protein Smed_4841 1349715 - 1349870 + | hypothetical protein Smed_4842 1349901 - 1350260 + | hypothetical protein Smed_4843 1351344 - 1350850 - | hypothetical protein Smed_4845 1351819 - 1353336 + | hypothetical protein Smed_4846 1353333 - 1353596 + | hypothetical protein Smed_4847 1353621 - 1353962 + | hypothetical protein Smed_4848 1353959 - 1354261 + | hypothetical protein Smed_4849 1354437 - 1354664 + | hypothetical protein Smed_4850 1354986 - 1354735 - | acyl carrier protein Smed_4851 1355329 - 1355192 - | exopeptide protein Smed_4852 1355730 - 1355512 - | hypothetical protein TERM 990 1356051 - 1356078 + H 79 -13.4 -3.09015 | gap 1, opp_overlap 1356051 1356048 TCCGGACCATAAGCA GCCCCGC-CGCCG TGA TGGTGAGCGGGGC TTGCCTCCATGTCCA Smed_4853 1356087 - 1356344 + | hypothetical protein TERM 991 1356352 - 1356388 + F 87 -7.9 -4.72272 | overlap 1356353 TTCCATGATTTCTTC AGGCGGCTCCTTCAC CTGGAGA GTGACGGAGGCGCCG TTTTTGATCGAGCAG TERM 992 1356353 - 1356387 + F 73 -11.4 -3.43042 | overlap 1356352 TCCATGATTTCTTCA GGCGGCTCCTTCAC CTGGAGA GTGACGGAGGCGCC GTTTTTGATCGAGCA Smed_4855 1357055 - 1357348 + | hypothetical protein TERM 993 1357477 - 1357457 - f 72 -4.5 -4.67607 | overlap 1357458 1357459 TCTGGAAGAAATAAA CTGCTGCGG CGG CCGCCGCTA AGACAAGCGACCAGA Smed_4856 1357691 - 1357942 + | transglycosylase-associated protein Smed_4857 1357971 - 1358456 + | hypothetical protein Smed_4858 1359978 - 1358503 - | GntR family transcriptional regulator TERM 994 1360417 - 1360455 + G 74 -5.9 -4.43844 | gap 2, opp_overlap 1360425 TTATCGGTTCGACCG GTACGA-C-AGCCGCCGCG ACC CGCGGCGTCGAGCTCGAAC TTTTCTGGATCCTCG TERM 995 1360445 - 1360425 - g 72 -13.9 -2.79183 | opp_overlap 1360417 TCGACCGGTACGACA GCCGCCGCG ACC CGCGGCGTC GAGCTCGAACTTTTC Smed_4859 1360143 - 1361162 + | taurine ABC transporter, periplasmic binding protein TERM 996 1361450 - 1361499 + G 74 -5 -4.56597 | gap 3, opp_overlap 1361452, overlap 1361452 GAGCGCCGGGGAGAT CA-CG-CTCGGTGAGCGCC-GCATC ACC GGTCCCGGCGCCGACCGAGGCGTTG TTTTTCAGAAGCACG TERM 997 1361452 - 1361496 + G 81 -7.8 -4.40561 | gap 2, opp_overlap 1361452, overlap 1361450 GCGCCGGGGAGATCA CG-CTCGGTGAGCGCC-GCATC ACC GGTCCCGGCGCCGACCGAGGCG TTGTTTTTCAGAAGC Smed_4860 1361253 - 1362065 + | ABC transporter related Smed_4861 1362058 - 1362885 + | binding-protein-dependent transport systems inner membrane component TERM 998 1363118 - 1363163 + G 89 -12.5 -4.18401 | gap 1 CGTTGCCGGGCCGGA GGCCTGCGGCAAGCGCATCGTC GGC GCCGAGGCGATTGCCG-ATGCC TTTTCCGGTGTATGG TERM 999 1363380 - 1363358 - g 78 -3.2 -5.03314 | overlap 1363359 GGCATTCCGAAAAAA CCGGCCGCTC ATC GAGCCGCAGC CGAGATACTGAGCGC Smed_4862 1363005 - 1363391 + | hypothetical protein Smed_4863 1363416 - 1364816 + | FAD dependent oxidoreductase Smed_4864 1365592 - 1364828 - | transcriptional regulator IclR Smed_4865 1365728 - 1367347 + | glucose-methanol-choline oxidoreductase Smed_4866 1367370 - 1368707 + | major facilitator transporter Smed_4867 1368718 - 1370493 + | sulfoacetaldehyde acetyltransferase Smed_4868 1370553 - 1371590 + | hypothetical protein Smed_4869 1371590 - 1372624 + | phosphate acetyltransferase TERM 1000 1372648 - 1372696 + G 72 -12 -3.32343 | gap 1, opp_overlap 1372657, overlap 1372641 1372648 GTGTATTATGCAGCC T-TTGCAATATTTGCGACATCCC TTGC GGCCTGTCGCGAATATTGCAACA TTGTCGGCATGTCCA TERM 1001 1372648 - 1372695 + G 71 -13.6 -2.59191 | opp_overlap 1372657, overlap 1372641 1372648 GTGTATTATGCAGCC TTTGCAATATTTGCGACATCCC TTGC GGCCTGTCGCGAATATTGCAAC ATTGTCGGCATGTCC Smed_4870 1372624 - 1373490 + | DeoR family transcriptional regulator Smed_4871 1373571 - 1376048 + | FAD dependent oxidoreductase Smed_4872 1376939 - 1376052 - | LysR family transcriptional regulator TERM 1002 1376228 - 1376217 - G 70 -7.2 -4.05033 | overlap 1376218 GGCAGCGGAGACAAA GCCG ACAC CGGC CCCGGCCGCGACGAT Smed_4873 1377033 - 1378706 + | Na+cotransporter Smed_4874 1378806 - 1380002 + | 2-aminoethylphosphonate--pyruvate transaminase Smed_4875 1380029 - 1381303 + | phosphonoacetate hydrolase Smed_4876 1381300 - 1382757 + | aldehyde dehydrogenase TERM 1003 1382783 - 1382803 + F 100 -14 -5.61881 | opp_overlap 1382783 TTCGCGCGTTATATA GGAGCGGC CTGTT GCCGCTCC TTTTTATTTTTGGGC TERM 1004 1382803 - 1382783 - f 77 -14 -2.87132 | opp_overlap 1382783 TTCGCGCGTTATATA GGAGCGGC CTGTT GCCGCTCC TTTTTATTTTTGGGC TERM 1005 1383814 - 1383791 - g 70 -7.4 -4.08767 | overlap 1383792 TCGAGGCGGCGAAAA CGCTGGTCGA CTGG TCGATCAGCA AGGAAGCCAACGAGA Smed_4877 1382989 - 1384011 + | extracellular solute-binding protein Smed_4878 1384151 - 1385314 + | ABC transporter related TERM 1006 1386793 - 1386776 - g 77 -2.7 -5.02476 | opp_overlap 1386783 ATATGGTCGAAAAAA CCAAG GGTTTCGG CTTGG GCCGAGGTGCATTCC TERM 1007 1386827 - 1386847 + G 71 -11.1 -3.4277 | TGCTTGCCATGTTGC CCATGGCCG TAC CGGGCATGG TTCTGGGTCTTGCCT Smed_4879 1385320 - 1387353 + | binding-protein-dependent transport systems inner membrane component Smed_4880 1388714 - 1387380 - | protein of unknown function DUF900 hydrolase family protein TERM 1008 1388563 - 1388594 + g 73 -11.4 -3.59979 | ACCCGGCTCGCTGTG GGCGCGCTGTCGGC GACA GGCGTCAGCACGCC TTTGGGATGCCCGCC TERM 1009 1388706 - 1388692 - G 72 -2.1 -4.78237 | gap 1 GAGGCGACAAGAAAA TCG-CG GCTG CGTCGA TTGGCCAACACGTAC Smed_4881 1390759 - 1388942 - | hypothetical protein Smed_4882 1391076 - 1392521 + | hypothetical protein TERM 1010 1392727 - 1392703 - g 100 -15.7 -4.19817 | overlap 1392704 GCTACCGACGGAAAA CCGCCGGGCCA CCG TGGCCCGGCAA GCGTGGGAGCCATAT TERM 1011 1392726 - 1392704 - g 89 -17 -3.11569 | overlap 1392703 CTACCGACGGAAAAC CGCCGGGCCA CCG TGGCCCGGCA AGCGTGGGAGCCATA Smed_4883 1392681 - 1393013 + | hypothetical protein Smed_4884 1393178 - 1393402 + | hypothetical protein TERM 1012 1393561 - 1393545 - f 81 -4.3 -5.09204 | ACATGCCAATAAAAA CAAAGGC TTC GCCCTGG AGATTTTTGGATGTC Smed_4885 1393572 - 1394573 + | integrase catalytic region Smed_4886 1394699 - 1396072 + | integrase catalytic region Smed_4887 1398509 - 1396401 - | NADH:flavin oxidoreductase/NADH oxidase TERM 1013 1397150 - 1397181 + g 74 -14.4 -2.52896 | CCCGGCGGCGCGGAC TCTGCGCGGTCAGG CGAA CCTGGCCGCCCGGA TCGCTTGCCGCCTCG Smed_4888 1398593 - 1399222 + | TetR family transcriptional regulator TERM 1014 1399850 - 1399879 + G 70 -7.7 -4.09739 | opp_overlap 1399843 TGAACGGACCGCAGG GCTGGGGCGGCAC AGTC GTGACGACGCAGC TTTTCAACGCGTTCG Smed_4889 1399372 - 1400373 + | substrate-binding region of ABC-type glycine betaine transport system TERM 1015 1400471 - 1400433 - f 75 -11.8 -3.25942 | opp_overlap 1400441 AGTGCTCCAGACTAA GCAGTGGATGCGGC TTGCACCGGTC GCCGCATTCACTGC CGAGGACAAGAAATC Smed_4890 1400522 - 1401505 + | ErfK/YbiS/YcfS/YnhG family protein Smed_4891 1402231 - 1401581 - | glutathione S-transferase domain-containing protein Smed_4892 1403518 - 1402319 - | major facilitator transporter Smed_4893 1403884 - 1403519 - | regulatory protein ArsR Smed_4894 1404056 - 1404379 + | hypothetical protein Smed_4895 1405108 - 1404605 - | cupin 2 domain-containing protein Smed_4896 1406377 - 1405172 - | putative adenylate/guanylate cyclase TERM 1016 1405244 - 1405229 - G 76 -6.8 -4.4078 | overlap 1405230 1405231 TCCGCGCAATGAAAA CTCGCC GAGC GGCGAA AGCCCCTCGCGTGAC TERM 1017 1408628 - 1408600 - g 78 -6.6 -4.59773 | overlap 1408601 GGCGATTGCCAAAAA GCTCGGCATCGA TGAGG TCGTCGCCGAGG TGCTGCCGGAAGGCA Smed_4897 1406561 - 1409044 + | heavy metal translocating P-type ATPase Smed_4898 1409194 - 1409637 + | MerR family transcriptional regulator TERM 1018 1409836 - 1409863 + F 73 -12.7 -2.73124 | overlap 1409835 ACGAGGTTCTCCTGC CGACGGACGCC CCGGTC GGCGTCCATCG ATTTCAGGAGTCAAG Smed_4899 1409881 - 1410972 + | glycosyl transferase group 1 TERM 1019 1411013 - 1410977 - f 88 -15.9 -3.14211 | opp_overlap 1410979, overlap 1410979 AGGCGGCGTGAGGAA CACGCCCGACGCGAACA ATG CATTCGCGTCAGGCGTT ATCCGTCCATGAAGG TERM 1020 1410979 - 1411011 + F 87 -14.9 -3.36878 | opp_overlap 1410977 1410979 GCGGCGTGAGGAACA CGCCCGACGCGAA CAATGCA TTCGCGTCAGGCG TTATCCGTCCATGAA TERM 1021 1411011 - 1410979 - f 100 -18.5 -3.13403 | opp_overlap 1410979, overlap 1410977 GCGGCGTGAGGAACA CGCCCGACGCGAACA ATG CATTCGCGTCAGGCG TTATCCGTCCATGAA TERM 1022 1411365 - 1411336 - g 81 -13.6 -3.61398 | overlap 1411337 TCTGCGCCGGAAGAA GCTGTCCCCTCG GCTTGT CGAGGGGACAGG ACGGACGATGAAGAC TERM 1023 1411364 - 1411337 - g 84 -17.1 -2.76696 | overlap 1411336 CTGCGCCGGAAGAAG CTGTCCCCTCG GCTTGT CGAGGGGACAG GACGGACGATGAAGA Smed_4900 1411022 - 1411648 + | exopolysaccharide synthesis ExoD Smed_4901 1411813 - 1412025 + | hypothetical protein TERM 1024 1412574 - 1412555 - T 74 -7.8 -4.25104 | gap 1 CGTGCCGGACGAAAA GCGG-AGGC TGC GCCCGCCGC GGATGCTCCGGATAT Smed_4903 1414074 - 1412815 - | RNA-directed DNA polymerase (Reverse transcriptase) Smed_4904 1414207 - 1414527 + | hypothetical protein Smed_4905 1414605 - 1414793 + | hypothetical protein TERM 1025 1414923 - 1414933 + G 73 -8.2 -4.0641 | overlap 1414901 GCCTTCACATCGATA GGGC CCT GCCC TTTCTCTGCGTGCAC TERM 1026 1415357 - 1415372 + G 76 -9 -4.08216 | CCTATCTATCGGCAG CCTGAC TCCG GTCAGG TTTTCCCGGAACTAC TERM 1027 1415411 - 1415467 + G 74 -10.2 -3.70902 | gap 2 CTGATCGCCACCATT TTCGACGCCGCCCTGCACGCCTTTGC TGCCTTC GCGAAGGCGA-C-GGGCAGCCTCGAA TTTCCCTCTCACCGC TERM 1028 1415549 - 1415559 + G 71 -5.4 -4.4648 | ATCGATGAGGTCGCC TCGA GTT TCGA TTTTCTCCTCGCCGT TERM 1029 1415631 - 1415587 - g 86 -13.5 -3.87815 | gap 1, opp_overlap 1415610 CGTCACGCCCATAAA CGCG-GAAGCCGCCTGGAGC GAGTTT GCGGCTGGCGGCTTCGCGCG TTCGCCGCGATTCCT Smed_4906 1414790 - 1416673 + | hypothetical protein TERM 1030 1416678 - 1416696 + F 73 -3.1 -4.7373 | TGCAGCAATAGGAGC GGCCA ACATGCGCA TGGCC TTTTTCGTCAACTCC TERM 1031 1417337 - 1417353 + G 73 -3.6 -4.7497 | overlap 1417339 TTCCCGACGCGGTCG CAGGCG ATATC CGCCTC TTTTTGCTGAATGGA Smed_4907 1416685 - 1417731 + | glutathione synthetase Smed_4908 1417869 - 1418831 + | periplasmic binding protein/LacI transcriptional regulator Smed_4909 1418920 - 1420437 + | ABC transporter related Smed_4910 1420437 - 1421459 + | monosaccharide-transporting ATPase Smed_4911 1421456 - 1422424 + | inner membrane ABC transporter permease protein YjfF Smed_4912 1422442 - 1423176 + | GntR domain-containing protein TERM 1032 1423342 - 1423293 - T 75 -10.5 -3.77464 | opp_overlap 1423294 AGAGGACGGAGCAAA CGCGGCTTCCCCCTTCTTCCCGT CACG ACGGGGAGAAGGTCGCGGCAGCG GGATGAGGGGCTGCG Smed_4913 1424466 - 1423315 - | ABC transporter related TERM 1033 1424016 - 1424002 - G 76 -5.6 -4.64861 | CTCGTCGAAAAGAAA CGCCTT CGG ATGGCG GATGATCGCGCGGCT Smed_4914 1425290 - 1424463 - | binding-protein-dependent transport systems inner membrane component Smed_4915 1426189 - 1425287 - | binding-protein-dependent transport systems inner membrane component TERM 1034 1426272 - 1426300 + r 71 -12.4 -2.87132 | gap 1 CATGCAGTGTGCGGC GGCGA-CCCCGGC CGAA GCCGGAGATCGCC TCTCTCGGGAGAAAA Smed_4916 1427614 - 1426382 - | extracellular solute-binding protein Smed_4917 1428579 - 1427677 - | xylose isomerase domain-containing protein Smed_4918 1429584 - 1428592 - | oxidoreductase domain-containing protein TERM 1035 1429307 - 1429318 + g 72 -7.2 -4.18018 | GCCGCTTCCAGTGAC GCCG CCAT CGGC TTTTCGCTCAGCACA Smed_4919 1429854 - 1430903 + | periplasmic binding protein/LacI transcriptional regulator Smed_4920 1431105 - 1431404 + | hypothetical protein TERM 1036 1431464 - 1431432 - T 74 -11.3 -3.53091 | gap 1, overlap 1431418 1431433 ACCGGCGCCGTCAAA GCACCCGCGCTCCC TCGACC AGGAGCGCGG-CGC GATGGCGGGCAAGGC ampC 1432641 - 1431481 - | beta-lactamase TERM 1037 1433242 - 1433281 + G 74 -5.7 -4.47183 | overlap 1433246 CCGGATCGGCGGCAC GGTGGCGGCGATGGAGG GGATTG CTTTTATCGTCGCTGTC TTTGTTTGCGTCGTG TERM 1038 1433528 - 1433538 + G 79 -8.2 -4.37092 | GCTGACGTCGAGGAC CCGC AGA GCGG TTTTCTCGCCAGGCT TERM 1039 1434015 - 1434002 - g 77 -4.5 -4.89009 | overlap 1434004 ACACTCAAGGAAAAA GGTGC TGCG ACACC GGTGGTCGCTGCGAT Smed_4923 1433129 - 1434250 + | peptidase M50 Smed_4924 1434405 - 1434905 + | hypothetical protein Smed_4925 1434970 - 1435413 + | hypothetical protein Smed_4926 1435944 - 1435465 - | hypothetical protein TERM 1040 1436044 - 1436015 - H 73 -2.9 -4.72272 | gap 1, overlap 1436017 GTGTTCCAGGAAAAA CG-GAAACCAGC CGCTCTC GCTGATCTCACG GAATGTTGTTGATCC TERM 1041 1436924 - 1436969 + G 70 -11.7 -3.13403 | gap 1, overlap 1436922 GATGGCGTCATCGTC GATCTG-CGCGGCCGGTGGGGC GGC GGCCCACCCGACGCGGCGGAGC TCTTCGTCGGCGACA Smed_4927 1436117 - 1437367 + | peptidase S41 Smed_4928 1438403 - 1437405 - | monosaccharide-transporting ATPase TERM 1042 1437915 - 1437882 - G 73 -11 -3.63515 | gap 1, overlap 1437885 GGCGATGCCGAAGAA CCATGCGCCGC-CGC CCAGC GCGAGCAGCGCATCG TGGTCCGGTCCGAAC Smed_4929 1439173 - 1438433 - | ABC transporter related TERM 1043 1439555 - 1439574 + H 100 -15 -3.90744 | opp_overlap 1439552 TTCGTGATTTAAGGC GCGGGCAC ACGA GTGCCCGC TTGTTTCAAGGGAGG TERM 1044 1439762 - 1439750 - g 76 -5.5 -4.56736 | ATGGAACAAGGAAAA TCCGG ACT CCGAA TACGAATGTTTCTAC Smed_4930 1439595 - 1440584 + | putative sugar uptake ABC transporter periplasmic solute-binding protein precursor TERM 1045 1440585 - 1440642 + T 73 -12.5 -2.74563 | gap 1, opp_overlap 1440582 1440594 1440595 TGCATTCAGAAATAG CCGGCCAAAG-CCGACACCCTGCGGCGC GCG GCGCCGCAGGGTGTCGGGCCAAACTCAG TGGTTCAGATCTGCC TERM 1046 1440632 - 1440594 - T 100 -30.4 -3.55815 | opp_overlap 1440585, overlap 1440582 1440595 AAATAGCCGGCCAAA GCCGACACCCTGCGGCGC GCG GCGCCGCAGGGTGTCGGG CCAAACTCAGTGGTT TERM 1047 1440631 - 1440595 - T 100 -33.9 -2.73007 | opp_overlap 1440585, overlap 1440594 1440582 AATAGCCGGCCAAAG CCGACACCCTGCGGCGC GCG GCGCCGCAGGGTGTCGG GCCAAACTCAGTGGT Smed_4931 1442044 - 1440647 - | glycoside hydrolase family protein TERM 1048 1443882 - 1443868 - g 70 -10 -3.5525 | overlap 1443873 ATATATTTTCGGAAA CGCAAC GCC GTTGCG TGACGCCGCAGGCGA TERM 1049 1444515 - 1444490 - g 74 -12.7 -3.34398 | gap 1, opp_overlap 1444494 1444501, overlap 1444488 1444494 GCGCTTGCGCAAACA CACACTCGCCTC GCC GAGGCGAGT-TG GTCCGGCGTTTCCTT TERM 1050 1444494 - 1444512 + G 80 -14.6 -3.16055 | opp_overlap 1444490 1444488 1444494, overlap 1444501 TTGCGCAAACACACA CTCGCCTC GCC GAGGCGAG TTGGTCCGGCGTTTC TERM 1051 1444512 - 1444494 - g 80 -14.6 -3.18571 | opp_overlap 1444494 1444501, overlap 1444490 1444488 TTGCGCAAACACACA CTCGCCTC GCC GAGGCGAG TTGGTCCGGCGTTTC TERM 1052 1444770 - 1444784 + G 74 -12.8 -3.28712 | TCTGCTGGCGCGAGT CGGGCG GGC CGCCCG TTGTCACACCCGCGC Smed_4932 1442210 - 1444933 + | signal transduction histidine kinase TERM 1053 1444957 - 1444974 + G 76 -7 -4.4634 | overlap 1444961 AACCGATGCCGGGTG CTCGTC GTCGAG GACGAG TTTCTTGTTGCGCTT Smed_4933 1444930 - 1445295 + | response regulator receiver protein TERM 1054 1445290 - 1445333 + T 89 -16.7 -3.14132 | overlap 1445293 GACATATACCCCGTC TCATGACGCCCCGGCCGGC GCGTTG GCCGGCCAGGGCGTGATCA TTAATCACCCGCCGC TERM 1055 1445293 - 1445330 + T 100 -18.4 -2.77899 | overlap 1445290 ATATACCCCGTCTCA TGACGCCCCGGCCGGC GCGTTG GCCGGCCAGGGCGTGA TCATTAATCACCCGC Smed_4934 1445605 - 1445354 - | XRE family transcriptional regulator TERM 1056 1445403 - 1445383 - G 78 -11.8 -3.73107 | opp_overlap 1445397 GCAGGAAATGGGAAA CCGGCACC TGCAG GGCGCCGG CGACGCGCTTGAGCT TERM 1057 1445523 - 1445569 + g 85 -15.1 -3.44325 | gap 1 CCGACCGCTTCACGC GCGGC-CTTGACGCGAGCGGCG ATGT CGCCGTTCGGGACAAGCGCAGC TTCCTTGTGGGCAAT Smed_4935 1445713 - 1445916 + | hypothetical protein TERM 1058 1448109 - 1448127 + G 72 -7.3 -4.17762 | opp_overlap 1448102, overlap 1448122 CATCAAGATCGGCCG CACGCCG CGGAA CGGCGGG TTGTTTTCCCGCGTG Smed_4936 1446421 - 1448241 + | ABC transporter Smed_4937 1448991 - 1448254 - | radical SAM domain-containing protein Smed_4938 1449344 - 1448988 - | putative 6-pyruvoyl tetrahydropterin synthase Smed_4939 1450054 - 1449344 - | exsB protein Smed_4940 1450273 - 1451187 + | hypothetical protein TERM 1059 1451350 - 1451318 - T 80 -14.3 -2.71144 | overlap 1451342 CAGGTGCTTGAACGA TCGTTTCACTGCCTC ACT GAAACAGCGAAACGA AACATTACGCGCTGG TERM 1060 1451363 - 1451392 + T 71 -11.5 -3.21912 | gap 1, opp_overlap 1451358, overlap 1451364 CGAAACATTACGCGC TGGCCTCATCCCTC GCT GAGG-ATGAGGCCC TTCGTCAGTTCCAGC TERM 1061 1451364 - 1451391 + T 81 -15 -2.52933 | gap 1, opp_overlap 1451358, overlap 1451363 GAAACATTACGCGCT GGCCTCATCCCTC GCT GAGG-ATGAGGCC CTTCGTCAGTTCCAG Smed_4941 1453182 - 1451368 - | ABC transporter related TERM 1062 1453162 - 1453147 - G 81 -11.8 -3.92143 | GAAAACGCTGAGAAA GGCGCG GTTG CGCGCC GTGAAACGGGTGAAT Smed_4942 1453711 - 1454697 + | UDP-glucose 4-epimerase TERM 1063 1454711 - 1454750 + T 82 -10.6 -4.12188 | opp_overlap 1454688, overlap 1454698 1454713 GACTTTCCCAGAGCG GCTGGCCGCGCTGTCGGA ACGT TTAGGCAGCCCGGCCATC TTTTCGAAATCGTCC TERM 1064 1454713 - 1454748 + T 81 -11.8 -3.6581 | opp_overlap 1454688, overlap 1454698 1454711 CTTTCCCAGAGCGGC TGGCCGCGCTGTCGGA ACGT TTAGGCAGCCCGGCCA TCTTTTCGAAATCGT Smed_4943 1455772 - 1454765 - | acyltransferase 3 TERM 1065 1455735 - 1455718 - G 78 -6.9 -4.63218 | opp_overlap 1455728 1455730 1455731, overlap 1455721 CCGCGTGGAAGAAAA CAACGGC GAGT GCCGCCG CGGCGCGGAGATATT TERM 1066 1455735 - 1455721 - G 91 -9.2 -4.43307 | opp_overlap 1455728 1455730 1455731, overlap 1455718 CGTGGAAGAAAACAA CGGCGA GTG CCGCCG CGGCGCGGAGATATT Smed_4944 1457073 - 1455769 - | O-antigen polymerase Smed_4945 1458349 - 1457081 - | polysaccharide export protein TERM 1067 1457471 - 1457497 + g 79 -10.8 -3.85817 | opp_overlap 1457473, overlap 1457472 CCGTTGCTCGAGGGA AAGCTTGCGCTG ACT CAGCGCAAGCCC TTTCTCGGCAAGGCT TERM 1068 1457472 - 1457496 + g 77 -14.3 -2.91276 | opp_overlap 1457473, overlap 1457471 CGTTGCTCGAGGGAA AGCTTGCGCTG ACT CAGCGCAAGCC CTTTCTCGGCAAGGC TERM 1069 1457495 - 1457473 - G 100 -17.8 -3.64703 | opp_overlap 1457472 1457471 GTTGCTCGAGGGAAA GCTTGCGCTG ACT CAGCGCAAGC CCTTTCTCGGCAAGG Smed_4946 1459083 - 1458403 - | undecaprenyl-phosphate galactose phosphotransferase TERM 1070 1458598 - 1458586 - G 83 -7.7 -4.54047 | CGAGCGCAGATAAAA TTCGG CAG CCGAA TCGTAGAGTTCAAGT TERM 1071 1459064 - 1459051 - G 91 -5.2 -5.24531 | overlap 1459053 ATCGGGGATAAAAAA CGGC GAACTG GCCG AGCGAGTCGCGGACT Smed_4947 1459843 - 1460139 + | posttranscriptional regulator, repressor protein Smed_4948 1460367 - 1461395 + | glycosyl transferase family protein Smed_4949 1462336 - 1461386 - | ExoV-like protein Smed_4950 1463407 - 1462448 - | glycosyl transferase family protein TERM 1072 1462975 - 1462989 + g 85 -5.6 -5.03314 | GGTCTTCCGAAAGGC GCGTGA CCA TCTCGC TTTTTTCGAGGTCCG Smed_4951 1463532 - 1465016 + | polysaccharide biosynthesis protein TERM 1073 1465045 - 1465061 + F 87 -7.9 -4.73613 | overlap 1465046 1465047 GCTTCGGAGGAGCAC CGCCGGT CCG ACCGGCC TTTTGTTGCTGCTAC TERM 1074 1465046 - 1465060 + F 73 -11.4 -3.43445 | overlap 1465045 1465047 CTTCGGAGGAGCACC GCCGGT CCG ACCGGC CTTTTGTTGCTGCTA Smed_4953 1465637 - 1465894 + | hypothetical protein TERM 1075 1466654 - 1466664 + G 91 -6.8 -5.32882 | overlap 1466640 1466638 TGCCGTTCCTTATCT GGAG CGG CTCC TTTTTTGTGGTGGTC Smed_4954 1466362 - 1467480 + | succinyltransferase protein Smed_4955 1467486 - 1468295 + | glycoside hydrolase family protein Smed_4956 1468388 - 1469596 + | putative glucosyltransferase protein Smed_4957 1469593 - 1470585 + | glycosyl transferase family protein TERM 1076 1471395 - 1471415 + G 73 -8.9 -4.05446 | overlap 1471396 CTTCTCTGCTTTCCT TCGGCAGCG AGG CGCTACCGG TTTGTACTTCGCGGC Smed_4958 1470585 - 1471514 + | glycosyl transferase family protein TERM 1077 1472392 - 1472347 - g 72 -3.7 -4.63527 | overlap 1472352 CGATCAGTTGAAAAA GAGATCGTTGGCCGGCGCGTT CAAA ACCGCACTGGCCGACCCGCTC GCACTCCGGCATCTC Smed_4959 1471511 - 1472533 + | glycosyl transferase family protein Smed_4960 1472538 - 1473443 + | nucleotidyl transferase Smed_4961 1473587 - 1475953 + | exopolysaccharide transport protein family Smed_4962 1476812 - 1476012 - | phosphomethylpyrimidine kinase Smed_4963 1477253 - 1477912 + | peroxidase TERM 1078 1477980 - 1477941 - T 100 -8.6 -4.93365 | gap 1, opp_overlap 1477945 1477967, overlap 1477942 1477944 1477945 GGCCAGAAGGAAAAA TGATGGGCGCACCGAATCT GCA AGATT-GGTGCGCCCTTGC TCCATTTTACGAATG TERM 1079 1477979 - 1477942 - T 77 -12.1 -3.55296 | gap 1, opp_overlap 1477945 1477967, overlap 1477941 1477944 1477945 GCCAGAAGGAAAAAT GATGGGCGCACCGAATCT GCA AGATT-GGTGCGCCCTTG CTCCATTTTACGAAT TERM 1080 1477977 - 1477944 - T 87 -14.7 -3.34125 | gap 1, opp_overlap 1477945 1477967, overlap 1477942 1477941 1477945 CAGAAGGAAAAATGA TGGGCGCACCGAATCT GCA AGATT-GGTGCGCCCT TGCTCCATTTTACGA TERM 1081 1477945 - 1477976 + T 100 -18.2 -3.27786 | gap 1, opp_overlap 1477944 1477942 1477941 1477945, overlap 1477967 AGAAGGAAAAATGAT GGGCGCACCGAATCT GCA AGATT-GGTGCGCCC TTGCTCCATTTTACG TERM 1082 1477976 - 1477945 - T 95 -18.2 -2.5939 | gap 1, opp_overlap 1477945 1477967, overlap 1477944 1477942 1477941 AGAAGGAAAAATGAT GGGCGCACCGAATCT GCA AGATT-GGTGCGCCC TTGCTCCATTTTACG Smed_4964 1479010 - 1478003 - | beta-lactamase TERM 1083 1478069 - 1478085 + g 71 -9.3 -3.73224 | opp_overlap 1478063 ATCACGATAGCCATT GCGTGCC GAC GGCCCGC TTTCATCCGAGGTCA TERM 1084 1478787 - 1478797 + g 73 -3.2 -4.70583 | opp_overlap 1478782 GCGGATATGATCGAC TTGG ACG CCGA TTTTATGTTGGTCGA Smed_4965 1479723 - 1479172 - | dehydratase TERM 1085 1479765 - 1479799 + r 75 -9.8 -3.84648 | opp_overlap 1479758 1479794 TTGAAAAGCGGATCT CCCGGCCTCTGCGCCC ATG GGGGGGAGAAGCCTGG TTTGGTGCTATTGGA Smed_4966 1481120 - 1479807 - | TRAP dicarboxylate transporter, DctM subunit Smed_4967 1481668 - 1481117 - | tripartite ATP-independent periplasmic transporter DctQ Smed_4968 1482687 - 1481710 - | TRAP dicarboxylate transporter- DctP subunit TERM 1086 1482916 - 1482896 - R 71 -12.6 -2.52543 | ACGTCCGTGAATGGA TCCTCGGG TCAAG CCCGAGGA TGACGGCGGGAGGGG Smed_4969 1484665 - 1483388 - | mandelate racemase/muconate lactonizing protein TERM 1087 1483625 - 1483639 + g 70 -10 -3.53811 | ACCGGCGTGCGGCCA TACGGG AAG CCCGTA TTTGGCAGCGATCAG TERM 1088 1484482 - 1484454 - G 70 -13.2 -2.83164 | TGACCGACGACGAGA TGCCGCATGGCC TGGAT AGCCATGCAGCA GACGTCATTGCCGCG TERM 1089 1484679 - 1484731 + r 70 -12 -2.82516 | gap 1 ATATTTGCTCCGATG GTCCTGCAGCGCCGCGCGTCTGACA GACG TG-CAAATGAGAGGCGCTGCAGGAA TATGATGCTGCCGAA Smed_4970 1485592 - 1484747 - | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Smed_4971 1486349 - 1485615 - | short-chain dehydrogenase/reductase SDR Smed_4972 1486807 - 1486346 - | dehydratase TERM 1090 1486465 - 1486449 - G 78 -15.1 -2.78596 | opp_overlap 1486442 CACCGCTCGACGACA CGGCCGG CCG CCGGCCG CTTCGGATCATCTTC TERM 1091 1486638 - 1486656 + g 84 -16 -3.02511 | GTACCATGGGCAATG CGCTGCCC GCC GGGCAGCG TCTTGGCGAACTCCG Smed_4973 1487892 - 1486810 - | oxidoreductase domain-containing protein TERM 1092 1487502 - 1487519 + g 73 -11.3 -3.56643 | TCACTGCCGCCTTAA TCTGCCG CGCG CGGCAGA TTTCAAGGATATCCG Smed_4974 1488214 - 1487885 - | hypothetical protein Smed_4975 1489339 - 1488227 - | mandelate racemase/muconate lactonizing protein Smed_4976 1490438 - 1489341 - | ABC transporter related TERM 1093 1489429 - 1489381 - G 75 -13.8 -3.06696 | gap 1 TCGCCGTCGAAGAGA TGCGCCCGGGAGAGATCGAG-GC TCAT GCGCACCTTCTCCCCCGAGCGCA ACGGCCGCGGGTTCA Smed_4977 1491311 - 1490445 - | binding-protein-dependent transport systems inner membrane component Smed_4978 1492207 - 1491311 - | binding-protein-dependent transport systems inner membrane component TERM 1094 1492278 - 1492225 - R 100 -13.1 -4.76041 | gap 1, opp_overlap 1492232 1492233 1492252, overlap 1492233 1492240 GAGATCCACTAAAAA GGTGAAGATGC-AGAACGGCGCCGGC TCG GCCGGCGCCGTTCTCGCAATTTGTGC TAGAGCTTGCCGGCG TERM 1095 1492232 - 1492271 + r 100 -23 -3.96892 | gap 1, opp_overlap 1492225 1492233 1492240, overlap 1492233 1492252 ACTAAAAAGGTGAAG ATGC-AGAACGGCGCCGGC TCG GCCGGCGCCGTTCTCGCAA TTTGTGCTAGAGCTT TERM 1096 1492270 - 1492233 - R 100 -26.5 -3.17553 | gap 1, opp_overlap 1492232 1492233 1492252, overlap 1492225 1492240 CTAAAAAGGTGAAGA TGC-AGAACGGCGCCGGC TCG GCCGGCGCCGTTCTCGCA ATTTGTGCTAGAGCT TERM 1097 1492233 - 1492270 + r 100 -26.5 -2.97653 | gap 1, opp_overlap 1492233 1492225 1492240, overlap 1492232 1492252 CTAAAAAGGTGAAGA TGC-AGAACGGCGCCGGC TCG GCCGGCGCCGTTCTCGCA ATTTGTGCTAGAGCT TERM 1098 1492262 - 1492240 - R 100 -22 -3.42503 | opp_overlap 1492233 1492232 1492252, overlap 1492233 1492225 GGTGAAGATGCAGAA CGGCGCCGGC TCG GCCGGCGCCG TTCTCGCAATTTGTG Smed_4979 1493597 - 1492278 - | extracellular solute-binding protein TERM 1099 1492828 - 1492847 + g 71 -5.6 -4.26881 | TCCCAGAGATAGTTG GTGGTGCC CGGC GGAACCGC TTTGCTTTTGTAGAG TERM 1100 1493444 - 1493454 + g 76 -6.8 -4.44797 | CCCATTCGCCGATGC GCTC GTA GAGC TTTTCATATTGCTGG Smed_4980 1493765 - 1494547 + | regulatory protein IclR Smed_4981 1494610 - 1495446 + | amidohydrolase 2 Smed_4982 1496416 - 1495538 - | polysaccharide deacetylase TERM 1101 1496450 - 1496436 - R 82 -10 -4.25283 | opp_overlap 1496446, overlap 1496438 1496440 AGGTCCTCAGCAAAA GACAGG ACG CCTGTC GCCGTCGCCGGCGAG TERM 1102 1496477 - 1496438 - R 72 -9.3 -3.73042 | gap 2, opp_overlap 1496446, overlap 1496436 1496440 GTCCTCAGCAAAAGA CAGGACGC-CTG-TCGCCG TCGC CGGCGAGCAGTGCTTCCAG AGCACGGCAGTCATT Smed_4983 1497887 - 1496427 - | MmgE/PrpD family protein TERM 1103 1496742 - 1496720 - G 70 -9.8 -3.65046 | CGTCCACCTCAAGAA GCATGCCATC CAT GACGGCTTGC ACGCGGGGATCGGCG TERM 1104 1497653 - 1497620 - G 80 -16.6 -2.62184 | CGGTCCCCCAGATCA GCGCGCCGCCCGGC GTGCCG GCCGTGCGGCGGGC GATGGCGGCTTCCGC Smed_4984 1498730 - 1497900 - | extracellular solute-binding protein Smed_4985 1499563 - 1498793 - | ABC transporter related Smed_4986 1500444 - 1499572 - | polar amino acid ABC transporter, inner membrane subunit Smed_4987 1501907 - 1500441 - | argininosuccinate lyase TERM 1105 1500510 - 1500486 - G 70 -9.9 -3.57144 | overlap 1500487 CTTCGGACCCGCAAA GGCCGCCCC GCCGGAT GGGGCGGCA GCAAAGGCCCGGCAT TERM 1106 1500509 - 1500487 - G 72 -13.4 -2.74144 | overlap 1500486 TTCGGACCCGCAAAG GCCGCCCC GCCGGAT GGGGCGGC AGCAAAGGCCCGGCA Smed_4988 1502162 - 1503064 + | LysR family transcriptional regulator Smed_4989 1503696 - 1503226 - | GCN5-related N-acetyltransferase Smed_4990 1504719 - 1503718 - | glycoside hydrolase family protein TERM 1107 1504546 - 1504562 + g 76 -9.3 -4.07568 | opp_overlap 1504514, overlap 1504548 CGGCCCCGCCCAGGC GAGCGCC TCC GGCGCGC TTTTCGCGGCAACGG TERM 1108 1504767 - 1504744 - R 81 -3.7 -5.10767 | overlap 1504745 CACGCAATACAAAAA GCCGACGGC GCATGT GCCGCCAGG ACCCACTGACGAGAC TERM 1109 1504896 - 1504867 - R 90 -16.5 -3.28924 | GACGGCGCGGCATAA CCCTTCTCCCCGT CAAA ACGGGGAGAAGTG GCGGCATCCGTATGA Smed_4991 1506063 - 1504933 - | hypothetical protein Smed_4992 1507220 - 1506060 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1110 1507192 - 1507164 - G 71 -5.2 -4.41616 | gap 1, opp_overlap 1507152, overlap 1507166 1507187 1507188 AGGGCCGGAAAGAAA CTGGCTCATGTCG ACCA CGACAAG-GCCGG CAAGCGGCAATTCGG TERM 1111 1507362 - 1507325 - H 72 -6.1 -4.26903 | opp_overlap 1507327 1507328, overlap 1507327 1507328 GCGAGTGGAGTAAAA GAGCCTCGCCAGCCCGA GGAC TTGGGCCGGCAGGATTC CTGTGACAGCAGGAA Smed_4993 1507504 - 1508805 + | capsule polysaccharide biosynthesis protein Smed_4994 1508811 - 1509581 + | ABC-2 type transporter Smed_4995 1509578 - 1510237 + | ABC transporter related Smed_4996 1510238 - 1511569 + | capsule polysaccharide export protein-like protein Smed_4997 1512624 - 1511623 - | KpsF/GutQ family protein TERM 1112 1513334 - 1513350 + G 100 -3.8 -5.4505 | GTCAGCAGTGAAAGC CAAAAT CAAGT ATTTTG TTTTTTCTTCGACCG Smed_4998 1513014 - 1514006 + | UDP-glucose 4-epimerase Smed_4999 1514089 - 1515114 + | capsule polysaccharide biosynthesis protein TERM 1113 1517035 - 1517074 + G 73 -2.9 -4.76087 | gap 3 GCGGTTCTGTTCATT TCGC-CACGGTCG-GCACGA ACC TCG-GCATGACTGCGAGCGA TTTCTTTGTTGTGTA Smed_5000 1515366 - 1517090 + | hemolysin-type calcium-binding region Smed_5001 1517837 - 1517160 - | hypothetical protein TERM 1114 1518376 - 1518392 + G 74 -2.2 -4.93365 | overlap 1518378 TTCGCAATTCATCAT GTTCGA GGATG TCGACC TTTTTCCTTATCCCG TERM 1115 1520319 - 1520306 - g 72 -3.7 -4.57569 | overlap 1520284 1520283 TCACGTCTCGAAAAA GCGCG CCTC CTCGC CCCCGACAACAAGTC Smed_5002 1518056 - 1520416 + | TPR repeat-containing protein Smed_5003 1521545 - 1520763 - | ABC-2 type transporter TERM 1116 1521829 - 1521798 - R 80 -10.1 -4.07133 | overlap 1521795 CAGGCGCACAAAGAA GACCGCCTCGATC CATTAC GATCAGGGCGGCC AGGCGGACCCACTGG Smed_5004 1522663 - 1521863 - | ketopantoate hydroxymethyltransferase TERM 1117 1522516 - 1522491 - G 73 -12.5 -3.19293 | overlap 1522479 1522478 1522508 1522509 AAGGCGAAGACGGAA GGGGCCGCCTC GCGA AAGGCGGGCCC GAGCAAGGCCGGCGG Smed_5005 1523929 - 1522703 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1118 1523832 - 1523797 - G 73 -11.1 -3.54424 | gap 1, opp_overlap 1523797, overlap 1523818 GGCCATCCTTCGAAA GCGGCG-GCCGCTCAT ATGGA AGGAGCGGCTCGGCGC CGATCAGGGTGATCT Smed_5006 1524596 - 1524279 - | Rieske (2Fe-2S) domain-containing protein Smed_5007 1525728 - 1524637 - | fatty acid desaturase TERM 1119 1525176 - 1525186 + g 71 -8.2 -3.88787 | CAGCGGCGCTGATCA CGCC GAA GGCG TTTCTGACCATGTCG Smed_5008 1525936 - 1526967 + | regulatory protein LacI TERM 1120 1527294 - 1527312 + G 73 -6.6 -4.33165 | overlap 1527295 TGCGGAGTTTGCGGA GGTCACCG GCT CGGTGGCA TTTTCCTCCCTTTGG Smed_5009 1527046 - 1530087 + | AsmA family protein Smed_5010 1530878 - 1530138 - | hypothetical protein TERM 1121 1530200 - 1530212 + g 78 -10.5 -3.97947 | GCCGTTCGACGCGTT CCCGG TCG CCGGG TTTATAATAACTGCG TERM 1122 1531126 - 1531156 + r 71 -11.1 -3.21595 | opp_overlap 1531122 1531121, overlap 1531122 1531134 CAATGAGGAAGCGGG CTGACCCAGGCGG ATTTG CCGACTGTGTCAG TTGCTCATCCACCTT Smed_5011 1533004 - 1531199 - | ABC transporter related TERM 1123 1532257 - 1532276 + g 78 -10.6 -3.99405 | overlap 1532223 1532222 1532258 AGCGCGCGATGCGGT TGGCGCGG TTCT CCGCGCCC TTTATGATCCCTTCG TERM 1124 1532258 - 1532275 + g 75 -14.1 -2.99161 | overlap 1532223 1532222 1532257 GCGCGCGATGCGGTT GGCGCGG TTCT CCGCGCC CTTTATGATCCCTTC TERM 1125 1532614 - 1532624 + g 79 -8.2 -4.25104 | TCTTGGCGGTGAGGT GCGC GGA GCGC TTTTCCTGGAAAAAG Smed_5012 1533461 - 1534639 + | hypothetical protein Smed_5013 1534990 - 1534694 - | hypothetical protein Smed_5014 1537238 - 1535151 - | acyltransferase 3 TERM 1126 1537056 - 1537043 - G 79 -8.1 -4.38219 | overlap 1537045 ACAAGACAAAAAAGA CGTCG ACCC CGACG AACCCGCCTGAGAAC Smed_5015 1538286 - 1537297 - | KpsF/GutQ family protein TERM 1127 1539018 - 1539028 + G 73 -6.8 -4.26076 | overlap 1539017 TGGAGTTGCCGCCCT GTGC TAC GCAC TTTTCATGGGAGTGC Smed_5016 1538563 - 1539300 + | putative membrane-anchored protein Smed_5017 1540769 - 1539276 - | glycosyl transferase family protein TERM 1128 1539753 - 1539735 - G 100 -6.7 -5.58209 | gap 1, opp_overlap 1539742, overlap 1539737 CGAAATCGAAAAAAA TGC-CGGC AGGC GCCGGGCA GGATCCAGGCCGGCG Smed_5018 1541046 - 1541735 + | hypothetical protein Smed_5019 1542768 - 1541863 - | putative glycosyltransferase protein TERM 1129 1542544 - 1542568 + g 72 -4.2 -4.63218 | CACGGAGGGGCCGGA GCCGACGA TAAGCACAT TCGCCGGC TTTTCTTCCAGGGCG Smed_5020 1543558 - 1542827 - | putative membrane-anchored protein TERM 1130 1543642 - 1543625 - R 79 -6.9 -4.56597 | overlap 1543627 CGTTTTCTTCAAAAA CTTCGGC TTCA GCCGACG TAAAAATTCGTCGGT Smed_5021 1544431 - 1543601 - | putative 3-deoxy-manno-octulosonate cytidylyltransferase (CMP KDO transferase) protein TERM 1131 1545382 - 1545345 - g 88 -4.1 -5.27335 | gap 1, overlap 1545347 GGTGCCAAAGAAAAA GC-GGAAGGCTGCCGAAT TTT ACTCCGCAGAGTTCCTGC AGCTCAATCACTATT Smed_5022 1544662 - 1545576 + | hypothetical protein TERM 1132 1545838 - 1545826 - g 76 -5.5 -4.56775 | ATTGTTTCGCAAAAA GGAAC AGC GTCCC GAGCTCGTAATCTCC TERM 1133 1546048 - 1546062 + G 71 -12.8 -3.04144 | GCATCAGATTACCTG GGCGCG GCT CGCGCC TCTTAGAGATGCCGC Smed_5023 1545632 - 1546603 + | hypothetical protein Smed_5024 1547471 - 1546626 - | hypothetical protein TERM 1134 1547146 - 1547135 - G 72 -2.2 -4.70169 | CTATATCGAAGAAAA CATC CAGC GACG ACACGATCACGAGAT Smed_5025 1548029 - 1548250 + | heavy metal transport/detoxification protein TERM 1135 1548305 - 1548277 - f 75 -12.4 -3.2614 | gap 1, opp_overlap 1548279 TAGCCGCGACAGCAA GGCACGC-TCCGC CGCG GCGGGCGCGTGCC TTGGCAACCGCCTGA Smed_5026 1548361 - 1548735 + | hypothetical protein Smed_5027 1548828 - 1549055 + | hypothetical protein TERM 1136 1549786 - 1549762 - g 70 -9.9 -3.63627 | GGGGCAGACGGCAAA GGCGAGGCTGG AGG CAAGGCTCGCC AAGGAAGAGCTGACG TERM 1137 1550453 - 1550422 - g 73 -12.8 -3.17075 | GCTGGCCGAAGCCAA TCTCGCCCCCGCCG TCTA CGGCGGCGGCGCGG GTGCCGCCGCCGTCG Smed_5028 1549052 - 1550515 + | hypothetical protein TERM 1138 1551794 - 1551774 - g 71 -6 -4.25104 | CGGCTGGTACGAAAA CCCGCCCG GAACG CAGGCGTG GGAGTGGACGGGCAA Smed_5029 1550530 - 1551879 + | multicopper oxidase type 3 Smed_5030 1551919 - 1552398 + | blue (type1) copper domain-containing protein Smed_5031 1552418 - 1552702 + | hypothetical protein TERM 1139 1552708 - 1552736 + T 77 -12.3 -3.56318 | opp_overlap 1552707 1552712, overlap 1552707 1552709 1552713 GGTCAAGTAAGTCAC AGGACGCGGCCGG CGT TCGGCCGCTTCCC TCTTGTTCTTGGCCG TERM 1140 1552709 - 1552735 + T 86 -15.8 -2.73309 | opp_overlap 1552707 1552712, overlap 1552708 1552707 1552713 GTCAAGTAAGTCACA GGACGCGGCCGG CGT TCGGCCGCTTCC CTCTTGTTCTTGGCC TERM 1141 1552713 - 1552731 + T 82 -13.8 -3.26097 | opp_overlap 1552712 1552707, overlap 1552709 1552708 1552707 AGTAAGTCACAGGAC GCGGCCGG CGT TCGGCCGC TTCCCTCTTGTTCTT Smed_5032 1554178 - 1553015 - | hemolysin-type calcium-binding region TERM 1142 1553174 - 1553158 - G 70 -10.1 -3.5891 | overlap 1553152 1553156 TGTCATAAGCAAAGA CAGTGCC GTT GGCACCG GAACTGGAATAGCGA TERM 1143 1553737 - 1553750 + g 79 -8.1 -4.29073 | CCTGCTGCGTGAGTT TCCCG GTTG CGGGA TTTATTCGGTTATTG Smed_5034 1555459 - 1555250 - | XRE family transcriptional regulator TERM 1144 1555600 - 1555549 - H 89 -6.1 -5.06816 | gap 2, opp_overlap 1555567, overlap 1555567 ATTTTGTAAGAAAAA TTACCGCCAGTGATCGAACAGGTGC GGGA ACACCTGTTCGAT--CTGACCACAA CCAAGCTGTCAGGAG Smed_5035 1555624 - 1556202 + | hypothetical protein Smed_5036 1556478 - 1556260 - | XRE family transcriptional regulator TERM 1145 1557850 - 1557863 + G 91 -9.5 -4.43272 | opp_overlap 1557842, overlap 1557842 GAGTAAAGGTGCAGC CGGCG GCGG CGCCG TTTTCGGTTTTCAAT Smed_5037 1556637 - 1558241 + | extracellular solute-binding protein Smed_5038 1558248 - 1559225 + | binding-protein-dependent transport systems inner membrane component Smed_5039 1559239 - 1560114 + | binding-protein-dependent transport systems inner membrane component TERM 1146 1561008 - 1560980 - g 70 -13.2 -2.87132 | overlap 1560992 CTCTTCCGCCATAGA CGGCGACCAGAA CCCGC TTCTGGTCGCGG AAGGCCTTTCGAAAC Smed_5040 1560111 - 1561784 + | ABC transporter related TERM 1147 1562714 - 1562735 + G 71 -8.7 -3.91897 | opp_overlap 1562712 TGTGGCCAAACGATG CATCGACGC AGGC GCGTCCATG TTTGTCAGTCACGGC Smed_5041 1561872 - 1563110 + | hypothetical protein TERM 1148 1563116 - 1563141 + F 77 -10.3 -3.86481 | overlap 1563117 1563139 AGCGCGGTAGTGGAC CGGCGGCGTCG GATC TGGCGCCGCCA TTCTTGTGGGTTGTT TERM 1149 1563117 - 1563140 + F 77 -13.8 -2.90804 | overlap 1563116 1563139 GCGCGGTAGTGGACC GGCGGCGTCG GATC TGGCGCCGCC ATTCTTGTGGGTTGT TERM 1150 1563717 - 1563734 + G 73 -12.7 -3.14132 | overlap 1563707 GCGCAAGGCGCCCAC GGCGACG TCTT CGTCGCC TTCGTGCCGGACGAG TERM 1151 1564289 - 1564274 - g 93 -9 -4.67982 | CGGGATTGAACAAAA GCGCAT TCCG ATGCGC GGCGGCACCGATGGC Smed_5042 1563228 - 1564472 + | peptidase T TERM 1152 1564498 - 1564478 - T 75 -10.3 -3.66784 | opp_overlap 1564478 CGACCGCTAACAGAA CGCGCCGCC CGT GACGGCTCG TTATGGAATTGCCCA Smed_5043 1564957 - 1564658 - | hypothetical protein Smed_5045 1566789 - 1566541 - | hypothetical protein Smed_5046 1567167 - 1567466 + | hypothetical protein Smed_5047 1567604 - 1568056 + | hypothetical protein Smed_5048 1569914 - 1568391 - | integrase catalytic region TERM 1153 1568950 - 1568964 + g 83 -7 -4.90525 | overlap 1568943 CGCTTGACCACCTTG GCTCCG TCA CGGTGC TTTTCTTTCAGCTTG TERM 1154 1570248 - 1570260 + G 78 -10.5 -4.09864 | GCCGTCATTCGTTAC CCGCC TTC GGCGG TTTTAAACGGTCAAT Smed_5049 1570053 - 1570421 + | hypothetical protein Smed_5050 1570591 - 1570397 - | conjugal transfer TraD family protein Smed_5051 1570892 - 1570596 - | TraC family protein SEQUENCE gi|150377168|ref|NC_009621.1| Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence (length 1245408) TERM 1 381 - 367 - g 90 -2.1 -5.42259 | gap 1, overlap 353 TCACGCGCAAAAAAA GAGTGC GCAT GC-CTC GGAGCAAAACCGGCC Smed_5052 21 - 967 + | transposase Smed_5053 1794 - 1039 - | arsenate resistance ArsH Smed_5054 2886 - 1807 - | arsenical-resistance protein Smed_5055 3502 - 3071 - | arsenate reductase Smed_5056 4026 - 3499 - | protein tyrosine phosphatase Smed_5057 4376 - 4026 - | regulatory protein ArsR Smed_5058 5201 - 4554 - | deaminase-reductase domain-containing protein Smed_5059 6104 - 5250 - | alpha/beta hydrolase fold TERM 2 7525 - 7542 + G 71 -5.5 -4.30719 | TCCGTTATGGACTTT CAGAACG GCGT CGATCTG TTTGTTCTGGAGAAC TERM 3 7715 - 7727 + G 73 -3.3 -4.7033 | overlap 7698 7721 TCGCTGCCTCTCACT TCAGC AGC GCGGA TTTTCTCTTCGCTTG Smed_5060 6553 - 7743 + | hemolysin-type calcium-binding region TERM 4 7787 - 7749 - T 100 -18.9 -3.05384 | opp_overlap 7756 CTTCGCTTGATCGAA CTTCGAACGCCGCACGC ATCCG GTGTGCGGCGTTCGATG TGGCGTCAAAGCGAC TERM 5 7756 - 7780 + T 85 -15 -3.12999 | opp_overlap 7749 TGATCGAACTTCGAA CGCCGCACGC ATCCG GTGTGCGGCG TTCGATGTGGCGTCA Smed_5061 8720 - 7962 - | short-chain dehydrogenase/reductase SDR TERM 6 8383 - 8373 - G 74 -4.6 -4.60487 | opp_overlap 8373 GACCAGCCGGAAAAA CGCC ATC GGCA TCATGTCGAACGCCG Smed_5062 9453 - 8728 - | hypothetical protein TERM 7 9204 - 9188 - G 74 -9.3 -3.92641 | overlap 9189 AATTGCAGGCAGAAA GCGGCCG CCC CTGCCGC CAGCAGGCGGCCAGT Smed_5063 10436 - 9453 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Smed_5064 11419 - 10433 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 8 10594 - 10582 - G 78 -10.5 -4.09864 | opp_overlap 10586 ATGGAGGCCGCAAAA GCCCC GGC GGGGC GCCATCTATTGCCGT TERM 9 11321 - 11303 - G 71 -13.8 -2.57564 | opp_overlap 11293, overlap 11302 GGACTCGCCGACAAT GCCGAGCG TTT CGCCCGGC GCGACCGAGAGGGAT Smed_5065 12384 - 11416 - | binding-protein-dependent transport systems inner membrane component Smed_5066 13304 - 12384 - | binding-protein-dependent transport systems inner membrane component TERM 10 12889 - 12876 - G 73 -6.7 -4.2803 | GAGGCCAAGCCAAAA TTGCG GCAT CGCAA GCCCGAGAAGTCCGA Smed_5067 14868 - 13381 - | extracellular solute-binding protein TERM 11 14606 - 14625 + g 76 -9.3 -4.09685 | CGCAATTTGAACTGC CAGGTCG TGGCAT CGACCTG TTTTGGAGCCTCCGC Smed_5068 16310 - 14889 - | amidase Smed_5069 16485 - 16297 - | hypothetical protein Smed_5070 17965 - 16478 - | extracellular solute-binding protein Smed_5071 19382 - 18021 - | BFD/(2Fe-2S)-binding domain-containing protein TERM 12 18939 - 18910 - G 76 -11.3 -3.78953 | opp_overlap 18910 18929, overlap 18929 AGTGCGAGCAGCAAA GGGCCGCTTCCCG CAAG CAGGACGCGTCCC TCCGGCACCCGGCCC Smed_5072 19632 - 19375 - | ferredoxin Smed_5073 20912 - 19629 - | FAD dependent oxidoreductase TERM 13 21474 - 21486 + G 74 -10.5 -3.70149 | ACCCAGCAGCTGATC GGCCG TTA CGGCC TTTCGCTCGTCTACC Smed_5074 20991 - 21875 + | LysR family transcriptional regulator Smed_5075 22372 - 21887 - | AsnC family transcriptional regulator TERM 14 21997 - 21977 - G 71 -8.9 -3.90744 | GTTGTTGCCAAAGAA GAGGCGCCG GGT CAGTGCCTC GTAGTCGCCCATCGT Smed_5076 22476 - 23675 + | diaminopropionate ammonia-lyase Smed_5077 25455 - 23806 - | ABC transporter related Smed_5078 26369 - 25452 - | binding-protein-dependent transport systems inner membrane component Smed_5079 27299 - 26382 - | binding-protein-dependent transport systems inner membrane component Smed_5080 28880 - 27372 - | extracellular solute-binding protein TERM 15 28756 - 28792 + g 70 -10.1 -3.54638 | ATGGTACCGCAGGGC TCGAGATTGGCCGGCTG TTC CGGCAGGACGATCTTGA TTTCCGAGGCATTCT TERM 16 28916 - 28943 + r 81 -12.7 -3.63276 | opp_overlap 28916, overlap 28911 ACAACGACGATCGAA GGCGGGCGCCA TCCTCC TGGTGCCTGCC TTATGCTTGTTCTCA Smed_5081 29861 - 28956 - | 5-dehydro-4-deoxyglucarate dehydratase TERM 17 29928 - 29942 + r 79 -5.6 -4.81249 | opp_overlap 29929, overlap 29929 TTTAGAGATGAGTCA ACCGAC CTC GTCGGC TTTTTCGGTTTGACG Smed_5082 30677 - 29925 - | GntR domain-containing protein TERM 18 30882 - 30864 - R 78 -14.6 -2.52464 | overlap 30868 CGGCTTTTCAAGCGA GAGACGCG CGA CGCGTCTC GGTGTCGATGAGAAA Smed_5083 32169 - 30856 - | major facilitator transporter TERM 19 33888 - 33910 + r 74 -6.2 -4.52589 | TGCAGGCCCGGAATG GCCGATTGAG AAG CGTAGTCGGC TTTTGTGTCGAACAC Smed_5085 34677 - 33928 - | enoyl-CoA hydratase/isomerase Smed_5086 36327 - 34690 - | methylmalonyl-CoA mutase, large subunit TERM 20 35968 - 35925 - G 70 -7.5 -4.08216 | gap 3, opp_overlap 35916 CTATTCCGTCGAAAA GC-CGTTCGACGTCGTCTACCG TAT CGATGG-CGACGCCG-ACGCGC CCGACCTCACCGAAG Smed_5087 37378 - 36377 - | LAO/AO transport system ATPase Smed_5088 37836 - 37375 - | cobalamin B12-binding domain-containing protein Smed_5089 39204 - 37849 - | aminotransferase class-III TERM 21 38493 - 38508 + g 74 -4.6 -4.65895 | opp_overlap 38487 38485, overlap 38495 CCAGAATGAGCAGCA TTCCGC GCTC GCGGCA TTTTTCCATGAGCGC TERM 22 39118 - 39096 - G 86 -7.6 -4.72272 | CGTCGGCATCAAAAA CGAAAGAGCC CCT GGCCCGCTCG ATGATCGCGGGGTCG Smed_5090 39301 - 40158 + | LysR family transcriptional regulator Smed_5091 41120 - 40311 - | beta-ketoadipate pathway transcription regulator Smed_5092 41190 - 41897 + | 3-oxoacid CoA-transferase, A subunit Smed_5093 41894 - 42577 + | 3-oxoacid CoA-transferase, B subunit Smed_5094 42589 - 43791 + | beta-ketoadipyl CoA thiolase TERM 23 44106 - 44071 - T 79 -13.2 -3.37056 | opp_overlap 44100 ACGATTGACGCAGAA GGCCGTCCGACGCGTG GAGG CACGCGTCAGGCATCC GTACCGGCGGCCTTT Smed_5096 45414 - 44227 - | acetyl-CoA acetyltransferase TERM 24 44314 - 44285 - G 74 -9.1 -3.93742 | overlap 44282 44280 CCGATACAAACAGAA GCGATGCCGCGTC TCAG GCCACGGCGCCGC AACGCATTGACGAGC Smed_5097 46208 - 45441 - | short-chain dehydrogenase/reductase SDR Smed_5098 46329 - 47372 + | helix-turn-helix domain-containing protein Smed_5099 47890 - 47354 - | RES domain-containing protein Smed_5100 48276 - 47887 - | hypothetical protein Smed_5101 49378 - 48383 - | malate/L-lactate dehydrogenase TERM 25 48692 - 48676 - G 71 -9.3 -3.79906 | overlap 48664 GGACCTCCACAAGAA GGGCGAC ATT GGCGCCC TTGCGACCGCCGGCA TERM 26 48765 - 48813 + g 75 -14.7 -2.6999 | gap 3, overlap 48760 48777 GGCTGTCCATTCCGG TCCTGCGCC-C-AGC-CGGCGGGG ATCG CCTCGCCGCGGTCGCGGCGCAGGA TCATCTCGGTTTTGG TERM 27 48951 - 48916 - G 90 -18.2 -3.01924 | opp_overlap 48916 GATTGGTTCCGAAGA GCGCCGCCGCCGCACC GGGA GGCGCGACGGCGGCAG GTGCGTTCGAGACGC Smed_5102 50499 - 49375 - | mandelate racemase/muconate lactonizing protein TERM 28 49633 - 49657 + g 73 -12.7 -3.21925 | opp_overlap 49617 49613 GCAGATCTTCAGCCC GGCGGCCTCCG CCA CGGCTGCCGCC TTCATCATCGGCTGT TERM 29 50576 - 50616 + r 79 -14 -3.15354 | gap 2, opp_overlap 50548, overlap 50574 TGCCGGCAGGCGCCC TCCC-CG-CCCGCCTGCAGC ATG GCCGCAGGCGGGACGAGAGA TATTCGATTGAGATC Smed_5103 51542 - 50652 - | substrate-binding region of ABC-type glycine betaine transport system Smed_5104 52320 - 51565 - | binding-protein-dependent transport systems inner membrane component TERM 30 51769 - 51742 - G 78 -4.7 -4.72272 | CGCGCCGATCAAAAA GACCAGCGGCG CGGAGC CGACGCAGATC GCGAGCGCCGTGCGG Smed_5105 53432 - 52317 - | glycine betaine/L-proline ABC transporter, ATPase subunit Smed_5106 54091 - 53429 - | binding-protein-dependent transport systems inner membrane component Smed_5107 54795 - 54115 - | isochorismatase hydrolase TERM 31 54250 - 54213 - G 72 -11.9 -3.28712 | gap 1, overlap 54214 TGTCTCCTTCCAGAA GGGCGCATGCGGACGCCG TGT CGACGACCGCAC-CGCCA TAGAGGCGGTTCGCC TERM 32 54249 - 54214 - G 77 -15.4 -2.57132 | gap 1, overlap 54213 GTCTCCTTCCAGAAG GGCGCATGCGGACGCCG TGT CGACGACCGCAC-CGCC ATAGAGGCGGTTCGC TERM 33 54520 - 54487 - G 93 -17.5 -3.44146 | gap 1 GTTCTTGACAAGCAA CCGCTCCGAAGGTCGC GGA GCGACCTCCGG-GCAG ATCGCCGTAAGCGGG Smed_5108 56099 - 54795 - | peptidase M24 Smed_5109 57184 - 56192 - | AraC family transcriptional regulator TERM 34 56861 - 56849 - G 74 -10.5 -3.81146 | GCGGGCAAGGAAGAA GGCCG CAT CGGCC ACGGCGCCGAGTTGC Smed_5110 58727 - 57192 - | trimethylamine methyltransferase TERM 35 58895 - 58885 - H 100 -5.4 -5.77853 | overlap 58886 AATGGCCAAAAAAAA CCAT GTC ATGG CATGCTTGCATCTTG Smed_5111 58959 - 59846 + | LysR family transcriptional regulator TERM 36 59928 - 59944 + F 89 -6.5 -5.12172 | opp_overlap 59927 AACAAACGAAAATTG CGAGATC AAT GACCTCG TTTTATTTGTTCATC TERM 37 60052 - 60063 + F 74 -2.2 -5.02074 | opp_overlap 60044, overlap 60040 GCAGATATCCGCCGA TGGC AGAG GTCA TTTTTTCGAGGCTGG TERM 38 62238 - 62216 - g 71 -5.4 -4.46926 | overlap 62217 CATCTTATGAGAAAA TTGCCGCGGA GCG CCCGAGGCAG AAGCTCGCCATCGTA TERM 39 62490 - 62466 - g 71 -12.9 -3.03441 | opp_overlap 62463 62487 TACCATTCTGGAACA TCCGCCCTTCG ACC CGAAAGGCGAA AGACTTCGTATGTAG Smed_5112 60085 - 62505 + | FAD dependent oxidoreductase TERM 40 63128 - 63100 - g 86 -7.4 -4.72272 | gap 1, opp_overlap 63112, overlap 63101 63104 GCTCCTGACGAAAAA GCGA-CCCGTGAG CATC CCCACGGGTTCGA CCGAGGAGAAGTTCG TERM 41 63127 - 63101 - g 71 -10.9 -3.43042 | gap 1, opp_overlap 63112, overlap 63100 63104 CTCCTGACGAAAAAG CGA-CCCGTGAG CATC CCCACGGGTTCG ACCGAGGAGAAGTTC TERM 42 64558 - 64576 + G 83 -7.4 -4.58663 | opp_overlap 64557 TTGCAGGGAAGTGAT GGAGCG ACGTGTC CGCTCC TTTTTCGAAGATCAT Smed_5113 62783 - 65998 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Smed_5114 66185 - 66877 + | two component LuxR family transcriptional regulator TERM 43 68134 - 68165 + G 100 -16.6 -4.03234 | gap 1 GGCCAGCGGGGAGAC CGACGCGGCGGCAGC GGC GCT-CCGCCGGGTCG TTTATCTGGACAGCA Smed_5115 67040 - 68398 + | protein-glutamate O-methyltransferase Smed_5116 68395 - 69063 + | putative CheW protein Smed_5117 69044 - 70681 + | methyl-accepting chemotaxis sensory transducer TERM 44 72330 - 72342 + G 81 -10.5 -4.18506 | ATGGTGCTTCCGGAC GGGCG CAT CGCCC TTCTTTTGAACGTCG Smed_5118 70668 - 72791 + | CheA signal transduction histidine kinase Smed_5119 72801 - 73832 + | response regulator receiver modulated CheB methylesterase TERM 45 73923 - 73946 + T 80 -2.2 -5.31275 | opp_overlap 73914 73924, overlap 73924 GAGAGAGAGAGAGAG ATGCGGGCGG AAAG CCGCGCACAC TTTTTTCTCATCGCG TERM 46 74030 - 73989 - T 100 -26 -5.22039 | gap 1 CGGAAACGGAAAAAA GGTGTGGCGCC-CGCGCGC ACTCG ACGCGCGAGGCGCCACACC GCCCCGCCCATGCTG Smed_5120 75026 - 74061 - | type II secretion system protein TERM 47 74159 - 74169 + g 74 -2.4 -4.84359 | TGAGCTTGGGCGGAA GGGC GGC GGCC TTTTTCTCGGCCTCG Smed_5121 76033 - 75035 - | type II secretion system protein Smed_5122 77495 - 76062 - | type II secretion system protein E TERM 48 77539 - 77570 + r 83 -13.8 -3.53091 | gap 1, opp_overlap 77545, overlap 77545 CTGAGGTCTTTGAAT GCGAAAGCGGAAGGC TAT GCCTCCCGCTTT-GC TTTGGAACCCGCGCT TERM 49 77565 - 77545 - R 95 -14.7 -3.66178 | opp_overlap 77545 77539 TCTTTGAATGCGAAA GCGGAAGGC TAT GCCTCCCGC TTTGCTTTGGAACCC TERM 50 77545 - 77565 + r 91 -12.5 -4.05788 | opp_overlap 77545, overlap 77539 TCTTTGAATGCGAAA GCGGAAGGC TAT GCCTCCCGC TTTGCTTTGGAACCC Smed_5123 77763 - 77596 - | Flp/Fap pilin component TERM 51 77812 - 77791 - R 72 -4.4 -4.60487 | opp_overlap 77800, overlap 77792 CATGAGTTGGAAAAA GTGCCGAA GCCAGG TTCGGCAT CACAGGGCCGGGCCG Smed_5124 78480 - 78055 - | TadE family protein Smed_5125 80240 - 78477 - | response regulator receiver protein TERM 52 79802 - 79785 - G 74 -10.5 -3.76224 | GGTCGAGTGACGAAA GCAGCGG TGGA CCGCCGC GACGAAATCCATCGG Smed_5126 81036 - 80245 - | SAF domain-containing protein TERM 53 80318 - 80305 - G 74 -5.2 -4.56597 | opp_overlap 80314 TCCGCCGTTGAAAAA GCGG ACCACG CCGC GTCGGGTTCCCTCGG TERM 54 80848 - 80860 + g 73 -3.3 -4.67982 | overlap 80832 GCCTTCCCATGGTTG CCAGC GCA GGTGG TTTTCTTCGATCGCC Smed_5127 81593 - 81081 - | peptidase A24A prepilin type IV TERM 55 81579 - 81564 - G 80 -5.4 -4.87626 | gap 1 GGCGAAGAGGAAAAA CGCAAGC CAC GCT-GCG GATGTCGAGATCATC Smed_5128 81810 - 83120 + | hypothetical protein Smed_5129 83205 - 83717 + | hypothetical protein Smed_5130 84289 - 83762 - | TPR repeat-containing protein Smed_5131 84622 - 84311 - | hypothetical protein Smed_5132 86019 - 84619 - | type II and III secretion system protein TERM 56 86008 - 85998 - G 80 -5.4 -4.85195 | AAAAGAACGCAAAAA GAGA GCC TCTC GACCTTGTCATGGTT Smed_5133 86927 - 86253 - | GntR family transcriptional regulator TERM 57 86998 - 86979 - H 74 -2.2 -4.96848 | gap 1 TCTTGTATACAAAAA TCTTGACAT GGT ACG-CAAGA AGGATCCACTCTTAT Smed_5134 87054 - 88058 + | TRAP dicarboxylate transporter- DctP subunit Smed_5135 88129 - 88698 + | tripartite ATP-independent periplasmic transporter DctQ Smed_5136 88695 - 90011 + | TRAP dicarboxylate transporter, DctM subunit TERM 58 90248 - 90223 - g 81 -10.4 -4.11216 | opp_overlap 90226 CTTCGATCCGGAAAA GCGGCGCGAT TTCATG ATCGCGCTGC TCTCGCACTTCGGGC Smed_5137 90008 - 91447 + | malonyl-CoA decarboxylase TERM 59 92242 - 92254 + G 71 -6.2 -4.3467 | ACGCGCGAGGTGACG GCCG GGATG CGGC TTTTCGTGTCGGGCT Smed_5138 91444 - 92976 + | malonyl-CoA synthase Smed_5139 93480 - 92998 - | transcription elongation factor regulatory protein TERM 60 93671 - 93698 + H 79 -13.4 -3.10464 | opp_overlap 93652, overlap 93664 CCGCGGGCCCGTTAC TCCCGGGCCTTC AACA GGAGACCCGGGA TGTTACACTTCCTAA Smed_5140 93698 - 94414 + | hypothetical protein TERM 61 94431 - 94464 + F 100 -21.1 -4.66833 | opp_overlap 94419 94435 CGATCCGCCACTCAT GAAAGCGGGGACCGA AGCT TCGGTCCCCGCTTCC TTTTTCCCCTTCAAC TERM 62 94460 - 94435 - f 100 -20.5 -3.76224 | opp_overlap 94431, overlap 94419 CCGCCACTCATGAAA GCGGGGACCGA AGCT TCGGTCCCCGC TTCCTTTTTCCCCTT TERM 63 94795 - 94768 - g 71 -9 -3.74693 | opp_overlap 94726, overlap 94769 CCCGATCTCAGCAAA TGCCGAGGCGTG TTCC CTCGCCTCAGCG GCAGAGCCCACGAAT TERM 64 94794 - 94769 - g 70 -12.5 -2.84602 | opp_overlap 94726, overlap 94768 CCGATCTCAGCAAAT GCCGAGGCGTG TTCC CTCGCCTCAGC GGCAGAGCCCACGAA Smed_5141 94700 - 94909 + | hypothetical protein Smed_5142 95737 - 94955 - | putative transmembrane anti-sigma factor Smed_5143 96276 - 95734 - | ECF subfamily RNA polymerase sigma-24 factor TERM 65 96637 - 96694 + G 93 -9 -4.74103 | gap 2 AACCGGGGCTCGGGC GGCTCCGGCCGTTCCGGCTCATACGGCG CCGG CGCCGGATGGAGCGG--CGGCAAGAGCC TTTTTCCGTTCCGAG TERM 66 97058 - 97106 + G 72 -13.8 -2.80816 | gap 1, opp_overlap 97070, overlap 97069 97070 AGGTGATCGGCTGGC CCGAAGCGCAAAGCTGGCCCGGC ACTT GCCCGGCCGGCGTT-CGTATCGG TCTGGTCGATACGGC TERM 67 97095 - 97070 - g 75 -11.7 -3.66178 | opp_overlap 97069 97058 97070 GGCCCGAAGCGCAAA GCTGGCCCGGC ACTT GCCCGGCCGGC GTTCGTATCGGTCTG TERM 68 97070 - 97095 + G 71 -13.9 -2.57026 | opp_overlap 97070, overlap 97069 97058 GGCCCGAAGCGCAAA GCTGGCCCGGC ACTT GCCCGGCCGGC GTTCGTATCGGTCTG TERM 69 97621 - 97679 + G 77 -12.6 -3.5394 | gap 4, opp_overlap 97670, overlap 97656 97657 GACTTCGCTGCGCCG GGCGTGGCCGTCT--GGACAGCG-GCCTCG GTC CGAGGCGCGC-GTCCGAAGACGGGGACGTC TTTCGCCGCACCTTT Smed_5144 96469 - 97863 + | peptidase S8 and S53 subtilisin kexin sedolisin Smed_5145 98347 - 98009 - | hypothetical protein Smed_5146 99522 - 98344 - | chaperone DnaJ domain-containing protein Smed_5147 100376 - 99570 - | endonuclease/exonuclease/phosphatase TERM 70 99992 - 99965 - G 72 -2.6 -4.72272 | overlap 99967 TGTCCGGATCAAAAA CCCGGACGCAAT GTGC ATTTCGTGCGCG CGGATGCTCACCCCA Smed_5148 101996 - 100452 - | major facilitator transporter TERM 71 100586 - 100568 - G 73 -11 -3.67175 | overlap 100564 100572 100575 100576 ATGTGGCAAAACCAA GCGAGAAG CCG CTCCTCGC TGCCTCCAGCCAGAC TERM 72 101298 - 101270 - G 83 -9.5 -4.30809 | overlap 101260 GAACACCGACCAAAA TGCCCAGTCCGAT CGG AGCGAGCTGGGCA AGCTGGAATCCGTCG Smed_5149 102200 - 102550 + | hypothetical protein TERM 73 102598 - 102639 + T 83 -13.6 -3.56568 | opp_overlap 102592, overlap 102600 102624 102634 CGTCCAAGAGCGGAT CTCCGGCGCCGGCTACTT GCTCCG AAGCGGCCGGCGCCGGTC TTTGACCGGTCCTTA TERM 74 102600 - 102637 + T 100 -20.6 -3.35775 | opp_overlap 102592, overlap 102598 102624 102634 TCCAAGAGCGGATCT CCGGCGCCGGCTACTT GCTCCG AAGCGGCCGGCGCCGG TCTTTGACCGGTCCT Smed_5150 103102 - 102659 - | activator of Hsp90 ATPase 1 family protein Smed_5151 104492 - 103146 - | transposase IS4 family protein Smed_5152 105466 - 104798 - | hypothetical protein Smed_5153 107723 - 105534 - | diguanylate cyclase/phosphodiesterase Smed_5154 109877 - 107886 - | hypothetical protein TERM 75 109699 - 109688 - G 71 -5.8 -4.28361 | CGAAGGTGAGCAAAA TGGC GATC GCCA GAGGCAGAAACACAT Smed_5155 110162 - 110476 + | hypothetical protein Smed_5156 110623 - 111228 + | hypothetical protein TERM 76 111252 - 111293 + T 76 -4.6 -4.72272 | gap 3, opp_overlap 111252, overlap 111256 GTGCAGCGGATTTAA GGTTGTGAATGCGGGACGCAG GCG TTGCGTCCCGC--TGA-AACC TTTTTCGTCACCGGC Smed_5157 112677 - 111301 - | amino acid carrier protein TERM 77 112413 - 112386 - G 91 -9 -4.45083 | opp_overlap 112410 CCCACATCCAGAAAA GCGCTCCCGGCC CGCC GACCGCGATCGC GGTAGCGACACCGGC TERM 78 112496 - 112520 + g 72 -7.8 -4.12188 | gap 1, overlap 112497 GGCGTAATCTCGCCC TCCGCA-GCCC TGCC GGGCGTGCGGC TTTTCAGGATCATGC Smed_5158 113029 - 112787 - | hypothetical protein Smed_5159 113321 - 113034 - | hypothetical protein TERM 79 113229 - 113244 + g 71 -9 -3.68351 | GGTGACCTGGGCATT GAGGTG CGTC CACCTC TTTCCGTCCTGAGGA Smed_5160 114388 - 113342 - | fatty acid desaturase TERM 80 113708 - 113692 - G 90 -15.1 -3.80142 | CATAGAAGAGCCAAA CGCCGGC GGC GCCGGCG AGCAGCACGACCGGG Smed_5161 114899 - 114474 - | hypothetical protein TERM 81 114709 - 114731 + g 78 -5.4 -4.78764 | overlap 114711 GCCTCCCTGGCACGG CCGGCGGCTT CAC GAGCAGCCAG TTTTTCCTGCATTTC TERM 82 114985 - 114949 - R 100 -15.9 -4.11623 | TATGATCAAAGGAAA CGTGCACAGCGTGAGAT TTT ACCTCCCGCTGTGAACG GAAAAAGGCCAGACA TERM 83 115011 - 114992 - R 95 -11.4 -4.74103 | opp_overlap 114992 114991 CTGTGAACGGAAAAA GGCCAGAC ATAC GCCTGGCC CTTTCGAACGTTTTG Smed_5162 115278 - 115069 - | cold-shock DNA-binding domain-containing protein TERM 84 115306 - 115330 + r 78 -11.3 -3.76413 | opp_overlap 115301 CTTAGCAACATTGAT CACCGCTGGGC GAC GCACAGCGGGG TTTCGACTTTTGAGA Smed_5163 116511 - 115546 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Smed_5164 117422 - 116508 - | ABC transporter related Smed_5165 118240 - 117419 - | binding-protein-dependent transport systems inner membrane component Smed_5166 119180 - 118245 - | binding-protein-dependent transport systems inner membrane component TERM 85 119251 - 119223 - R 84 -16 -2.59431 | gap 1, overlap 119219 GGGCGCGACAATCGA GGCGGGGGACAGC GGCC GCCG-CCCCCGCC CCCTCAGGCTTACTG Smed_5167 120853 - 119261 - | 4-phytase TERM 86 120945 - 120895 - R 79 -12.5 -3.35597 | gap 2, overlap 120893 120897 120898 GGCATCGTTTAAATA CAGTCCGGCGGGCCGTCAGCGTGCA TCG TGCACGACG-CGGCCCGCAAG-CAG GGTGAGCAAACAGCG TERM 87 120943 - 120897 - R 82 -13.7 -3.24708 | gap 2, overlap 120895 120893 120898 CATCGTTTAAATACA GTCCGGCGGGCCGTCAGCGTGCA TCG TGCACGACG-CGGCCCGCAAG-C AGGGTGAGCAAACAG TERM 88 120943 - 120898 - R 74 -13.9 -2.54504 | gap 1, overlap 120897 120895 120893 ATCGTTTAAATACAG TCCGGCGGGCCGTCAGCGTGCA TCG TGCACGACG-CGGCCCGCAAGC AGGGTGAGCAAACAG Smed_5168 122535 - 120910 - | amidohydrolase 3 Smed_5169 122720 - 123661 + | LysR family transcriptional regulator Smed_5170 124706 - 123669 - | peptidase S58 DmpA TERM 89 123955 - 123924 - G 72 -12.2 -3.29511 | gap 1, overlap 123925 123943 GCCATGGCCCCAGAA GGCGCCGAGGCGGGC AAG ACCCGCGCCGGC-CC GCCGCGTGATCCGCT Smed_5171 125623 - 124772 - | aminotransferase class IV TERM 90 125588 - 125550 - G 76 -5.8 -4.66537 | opp_overlap 125563, overlap 125563 TCGCCGAACAGAAAA CCCCGGTCAAAAAGCCCG ATC CGGGCTTCCTCCTCGGGT ATGAATTGACCATGG TERM 91 125575 - 125563 - G 95 -10.5 -4.57341 | opp_overlap 125563, overlap 125550 AACCCCGGTCAAAAA GCCCG ATC CGGGC TTCCTCCTCGGGTAT Smed_5172 125869 - 127419 + | hemolysin-type calcium-binding region TERM 92 127872 - 127886 + F 75 -5.6 -4.62069 | opp_overlap 127863, overlap 127873 GAGAAGGCTTCCAGA CGAGGC TAA GCCTCA TTTTTAAGCTGACCA Smed_5173 128745 - 129920 + | cobyrinic acid ac-diamide synthase Smed_5174 129917 - 130921 + | parB-like partition protein TERM 93 130964 - 130937 - f 87 -4.1 -5.45802 | gap 1, opp_overlap 130954, overlap 130931 130954 TCCGCAAAAGAAAAA GGCCCCCAACGA ACAAG CCGT-GGAAGCC TTCCTCAGATTTGTA Smed_5175 131077 - 132285 + | replication protein C Smed_5176 132282 - 132842 + | hypothetical protein Smed_5177 133447 - 133632 + | periplasmic nitrate reductase NapE Smed_5178 133640 - 134140 + | ferredoxin-type protein NapF Smed_5179 134133 - 134420 + | NapD family protein TERM 94 135608 - 135621 + GF 80 -9.5 -4.19817 | GGAAGATCTCTGAGC CGGGC AACA GCCCG TTTTCGCTCACTGGC TERM 95 135891 - 135917 + GF 76 -6.6 -4.49981 | opp_overlap 135890, overlap 135892 TACGCAGAACGAGAC CTATCAGGGTTA TCG TAACCCGGATAA TTTTGTCGTCGTCTC Smed_5180 134395 - 136899 + | nitrate reductase Smed_5181 136917 - 137372 + | nitrate reductase cytochrome c-type subunit (NapB) Smed_5182 137376 - 138077 + | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome TERM 96 138111 - 138140 + F 81 -11.6 -3.93288 | gap 1, opp_overlap 138118 CGAGCTGTTCCTGAT GATGGA-AGGCTG ACTTG CAGCCTATCCATC TTTAGTTGGCTGCAG Smed_5183 138490 - 138969 + | hypothetical protein fixK 139661 - 139026 - | transcriptional regulator FixK Smed_5185 140053 - 139784 - | hypothetical protein TERM 97 140818 - 140805 - g 74 -9.5 -3.87641 | AAGACCTTTCACAAA CGCCG CAAT CGGCG ATGATCACACGCGGA Smed_5186 140192 - 141946 + | hypothetical protein Smed_5187 143136 - 141991 - | hypothetical protein Smed_5188 143690 - 144178 + | hypothetical protein Smed_5189 144182 - 145411 + | secretion protein HlyD family protein Smed_5190 145523 - 146380 + | hypothetical protein Smed_5191 147235 - 146558 - | hypothetical protein Smed_5192 148377 - 147232 - | calcium/cation antiporter Smed_5193 149474 - 148533 - | extracellular solute-binding protein Smed_5194 150862 - 149504 - | putrescine transporter TERM 98 150735 - 150718 - G 71 -8.4 -3.83724 | opp_overlap 150718 AGGACAGAAGTGAAA TGGCGC CGACCT GCGCCA TGTTCGCCGGCAGCA TERM 99 150798 - 150810 + g 77 -4.1 -4.89477 | ACGATGAAGGTGAGC TGGAC CAG GTTCA TTTTCTTCTTCGACG Smed_5195 153253 - 150890 - | ornithine decarboxylase Smed_5196 155510 - 153240 - | lysine decarboxylase TERM 100 155431 - 155451 + g 74 -4.7 -4.63527 | gap 1, overlap 155420 155427 GCCTCTGCGAGGCTG CGCATGCC CCGCCC GGCA-GCG TTTTTACCCTCGTAA Smed_5197 156743 - 155718 - | cation efflux protein Smed_5198 158116 - 156791 - | amino acid permease-associated region Smed_5199 158938 - 158432 - | hypothetical protein TERM 101 158959 - 158983 + r 78 -9.9 -3.96327 | overlap 158957 TACTCCTCCTTGTTT CAGCCGTGCCG GTA CGGCAGAGCTG TTTCTGATGGCCGGT Smed_5200 160103 - 159153 - | hypothetical protein Smed_5201 161521 - 160124 - | hypothetical protein TERM 102 160185 - 160228 + g 86 -18 -2.70932 | overlap 160182 CCACGTCCCCCCATC GGCGGCCGGCTGCCGCCG CGACTCAT CTGCGGCCGCCCGCCGCC TCGTTGCCCGCCGCC TERM 103 162005 - 161989 - H 95 -3.6 -5.71638 | CAAGAACGAAAAAAA TCCGGC GTAAT GCTGGA GCCTGCTTTGGCGCG Smed_5202 162271 - 163500 + | arginine deiminase Smed_5203 163540 - 164544 + | ornithine carbamoyltransferase Smed_5204 164547 - 165521 + | carbamate kinase TERM 104 165638 - 165610 - f 71 -6.8 -4.18018 | gap 1, overlap 165629 165630 165631 TTCCGTTATTCAAAA GC-GTGCACGT GCGAGAAA ACGTGCACTGC GTGCAACAACTTCCC Smed_5205 165743 - 166213 + | hypothetical protein Smed_5206 166597 - 166881 + | hypothetical protein TERM 105 167115 - 167126 + G 77 -2.2 -5.04385 | CCGGGTCAGAACTTC TTGC GCGT GCAG TTTTTTGGACCTGTA Smed_5207 166863 - 167798 + | hypothetical protein TERM 106 168655 - 168667 + G 93 -3.3 -5.64274 | CGCGCCTGTTTCTCG TGCAG ACG CCGCA TTTTTTTCTCAATCC TERM 107 169590 - 169578 - g 95 -10.5 -4.58283 | opp_overlap 169584, overlap 169580 GAACGCGGGGAAAAA GCCGC GTC GCGGC GCGTCAAAGTAAGTC Smed_5208 167877 - 170057 + | cellulose synthase (UDP-forming) TERM 108 171866 - 171882 + G 71 -5.7 -4.2828 | TCGTCTGAGGTTCTT GCCGACT CGC GGGCGGC TTTTGATGCCTGGCA Smed_5209 170075 - 172396 + | cellulose synthase subunit B Smed_5210 172393 - 173427 + | cellulase TERM 109 174480 - 174446 - g 84 -17.2 -2.78384 | opp_overlap 174446 TGCGCCGGCATCACA GGGCCTTGCGCTCG TCTTGAT CGAGCGCAAGGCAC CCGAGGAAGCCGAAA TERM 110 174697 - 174713 + G 70 -7.9 -4.08064 | overlap 174690 174707 TCCTTGGGCAGCCAG CCACGGC TGT GCAGTGG TTTTCGACCACGCTT TERM 111 174972 - 174945 - g 72 -12 -3.32946 | gap 1, overlap 174943 174963 174964 GCGCCAATCAGAACA GCGGCGGCGCC AGCGAAA GGCGC-GCCGC TTGGGAGCGCCGCCC Smed_5211 173424 - 175541 + | hypothetical protein Smed_5212 175780 - 175562 - | hypothetical protein Smed_5213 175924 - 176184 + | hypothetical protein Smed_5214 177614 - 176235 - | hypothetical protein Smed_5215 177956 - 178951 + | helix-turn-helix domain-containing protein Smed_5216 179098 - 179847 + | short-chain dehydrogenase/reductase SDR TERM 112 179988 - 180009 + G 76 -10.1 -3.86916 | opp_overlap 179983 179988, overlap 179983 GATGGATAATGGAAA GCCCAACGT CATG ACGATGGGC TTTCATATGATGATC TERM 113 180009 - 179988 - g 74 -10.1 -3.81339 | opp_overlap 179988 179983, overlap 179983 GATGGATAATGGAAA GCCCAACGT CATG ACGATGGGC TTTCATATGATGATC Smed_5217 179905 - 180453 + | flavin reductase domain-containing protein TERM 114 180462 - 180436 - f 81 -13.1 -3.57462 | gap 1 GAGCGCATGGTCAAA TGGCGCCATCTC CCCT GAGA-GGCGCCA GACCCTCAAGAAGCA Smed_5218 180508 - 180792 + | hypothetical protein Smed_5219 180894 - 181196 + | antibiotic biosynthesis monooxygenase TERM 115 181849 - 181825 - g 74 -13.5 -2.83715 | opp_overlap 181824, overlap 181830 TTGACGATTACGACA GCACAGCGGGC GAA GCCCGTCGTGC CTATCATGCCTCCGT Smed_5220 181218 - 182057 + | short-chain dehydrogenase/reductase SDR TERM 116 182929 - 182893 - T 74 -13.8 -2.60571 | gap 1, opp_overlap 182902, overlap 182902 AATGGGGTAAGTAAC GACGAGAAAGTCCGGGC TTCC GCCCGGGCTTTC-CATC TACCTGTAAACTCGG TERM 117 182902 - 182921 + T 84 -12.8 -3.72141 | opp_overlap 182893 182902 AGTAACGACGAGAAA GTCCGGGC TTCC GCCCGGGC TTTCCATCTACCTGT TERM 118 182921 - 182902 - T 80 -10.6 -4.02424 | opp_overlap 182902, overlap 182893 AGTAACGACGAGAAA GTCCGGGC TTCC GCCCGGGC TTTCCATCTACCTGT Smed_5222 183379 - 182945 - | DoxX family protein TERM 119 183535 - 183514 - R 100 -7.2 -5.86332 | overlap 183531 TCAAGCCAAAAAAAA CCCGCATC TGTGAG GAAGCGGG TCCGGCCGGAGGGCG fabG 184333 - 183557 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 120 184057 - 184100 + g 74 -10.1 -3.81447 | opp_overlap 184062, overlap 184058 CGGCATTTGCGACCA TGACATGGACGCCGCCGAA ATCCTC TGCGGCGGCGACCAGGGCG TTGTTGTCAGCTCTG TERM 121 184095 - 184062 - G 75 -14.5 -2.82516 | opp_overlap 184058 184057 TTTGCGACCATGACA TGGACGCCGCCGAAA TCCT CTGCGGCGGCGACCA GGGCGTTGTTGTCAG Smed_5224 184791 - 184345 - | hypothetical protein Smed_5225 185589 - 184816 - | short-chain dehydrogenase/reductase SDR TERM 122 184903 - 184921 + g 78 -14.6 -3.03124 | overlap 184883 184905 GTCCGAGGCGAGCCA GATCGCGG CTG CCGCGATC TCTTCCGGCCTGCCG Smed_5226 186272 - 185661 - | TrpR binding protein WrbA Smed_5227 187113 - 186517 - | NADP oxidoreductase coenzyme F420-dependent Smed_5228 188037 - 187141 - | pirin domain-containing protein Smed_5229 188138 - 189061 + | LysR family transcriptional regulator Smed_5230 190178 - 189177 - | beta-lactamase domain-containing protein TERM 123 190456 - 190417 - g 78 -6.4 -4.56597 | opp_overlap 190420 CGTGCTGTTGAAAAA TCTGCGCTCCGCCC CTTTTGGCATCT GGACGAAGCGCGGA CGTTCTTTGTCGGGC Smed_5231 190375 - 191178 + | helix-turn-helix domain-containing protein Smed_5232 192652 - 191348 - | amidohydrolase TERM 124 192743 - 192698 - H 74 -8.2 -4.16842 | opp_overlap 192705 192740, overlap 192701 GGGACGCGCAAGAAA GGACAACGCTGCGGCGCAGG ACACGG CATGCGCCACAACTTTGCTC TTCGAGAGCTTCTGC Smed_5233 193043 - 193384 + | hypothetical protein Smed_5234 194814 - 193726 - | hypothetical protein Smed_5235 196740 - 194902 - | citrate transporter TERM 125 196258 - 196219 - G 76 -5.6 -4.66833 | gap 1, opp_overlap 196247 GCCGAATTCGAAAAA GCCGAACG-CACCCACGCC CGC GTCGTAGCCGGCGTCCGAC ACCAGTACGTTCACG Smed_5236 198037 - 196826 - | peptidase M20 TERM 126 197421 - 197442 + g 76 -10.1 -3.92075 | overlap 197422 TCCGGCGCGACTCCG GCGTGGGAC GCCC GTCCCACGA TTTCTGCCTCCCAGT TERM 127 197422 - 197441 + g 74 -13.6 -2.94924 | overlap 197421 CCGGCGCGACTCCGG CGTGGGAC GCCC GTCCCACG ATTTCTGCCTCCCAG Smed_5237 199619 - 198075 - | AbgT putative transporter TERM 128 198814 - 198854 + g 86 -16.2 -3.14344 | overlap 198801 198821 AGCCCGCGCGATTCA GACGCTGAGAGCGCGG CTCCTTCGT TCGCGCGCTCAGCGTC TTCGTCGGGGACATA TERM 129 199535 - 199557 + g 78 -9.8 -4.08216 | GGAAGATTATGACGG GGTGGGGGAC CAT GTTGCCCACC TTTTCGACGCCGTCC TERM 130 199659 - 199696 + H 74 -6.2 -4.45544 | opp_overlap 199692 CCGCGAACCGGGGCG TGATGCCGACATCGCC GCCGCA GGCGAAGTAGACGTCA TTTTAGTTGATGCAA Smed_5238 199984 - 201030 + | helix-turn-helix domain-containing protein Smed_5239 201887 - 201204 - | GntR family transcriptional regulator Smed_5240 202030 - 203544 + | aldehyde dehydrogenase TERM 131 203620 - 203575 - f 71 -11.1 -3.23216 | opp_overlap 203576, overlap 203577 GTTTAGGAGGAGGAA TATCTCGGCTGGCGTGATC TTTGGTCG GAGCCCGCCAGCCGAGACT TGGGTCTTGCGACCC TERM 132 203576 - 203619 + F 79 -13.1 -3.1855 | opp_overlap 203575 203577 TTTAGGAGGAGGAAT ATCTCGGCTGGCGTGATCT TTGGTC GGAGCCCGCCAGCCGAGAC TTGGGTCTTGCGACC TERM 133 203618 - 203577 - f 89 -15.9 -3.18023 | opp_overlap 203576, overlap 203575 TTAGGAGGAGGAATA TCTCGGCTGGCGTGATC TTTGGTCG GAGCCCGCCAGCCGAGA CTTGGGTCTTGCGAC TERM 134 203705 - 203688 - g 74 -12.7 -3.29144 | opp_overlap 203678 TGACCGGGCTCAGAA CCGCAGC GCTG GCTGCGG GCCTTGCCACCTTGT Smed_5241 203666 - 204616 + | periplasmic binding protein/LacI transcriptional regulator TERM 135 204625 - 204660 + F 100 -19 -3.53811 | gap 1 TCGCTAACCGCGATC CGTGGGAGCCTGCCGGC GCG GCCGGCCGGTTCCC-CG TTTCCCAAAGATCGA Smed_5242 204626 - 205705 + | monosaccharide-transporting ATPase Smed_5243 205705 - 206442 + | ABC transporter related Smed_5244 206912 - 207472 + | GCN5-related N-acetyltransferase Smed_5245 208643 - 207720 - | arginase/agmatinase/formiminoglutamase Smed_5246 209536 - 208664 - | hypothetical protein Smed_5247 211081 - 209870 - | nitric oxide dioxygenase TERM 136 212036 - 212016 - g 77 -4 -4.82901 | gap 1, overlap 212019 GGCGCTCTACAAAAA GCACGCGAC CAGC ATCG-GTGC GGCGATCTCGACGAT Smed_5248 211462 - 212523 + | endonuclease/exonuclease/phosphatase Smed_5249 212723 - 213454 + | phospholipase/carboxylesterase Smed_5250 213459 - 213614 + | hypothetical protein Smed_5251 213674 - 214078 + | hypothetical protein Smed_5252 214533 - 214150 - | hypothetical protein TERM 137 214201 - 214179 - G 83 -7.6 -4.60041 | opp_overlap 214179 ATCCACTTGCAAAAA TCCGCAGGTC ATA GTCCTCCGGA TCATTTCGAAAGATC Smed_5253 215429 - 214593 - | hypothetical protein TERM 138 215320 - 215296 - G 71 -12.9 -3.04322 | overlap 215301 CGCAAGGGGTGAAGA TGGAAGCCCAG AGC CCAGGCTTCCA TCGTCATCAGTACAG Smed_5254 215605 - 215916 + | hypothetical protein Smed_5255 216571 - 215981 - | hypothetical protein Smed_5256 216627 - 217136 + | hypothetical protein Smed_5257 217186 - 217848 + | glutathione S-transferase domain-containing protein Smed_5258 218814 - 217963 - | hypothetical protein TERM 139 218541 - 218527 - G 74 -9.2 -3.89346 | opp_overlap 218537, overlap 218535 218536 GTCGTATTCGATAAA GGCAGC AAC GCCGCC GGCGGCCAGGACCGG Smed_5259 220295 - 218832 - | aldehyde dehydrogenase Smed_5260 221515 - 220316 - | alcohol dehydrogenase Smed_5261 222542 - 221538 - | malate/L-lactate dehydrogenase Smed_5262 222642 - 223328 + | GntR family transcriptional regulator TERM 140 224116 - 224141 + GF 70 -11.7 -2.72799 | opp_overlap 224117, overlap 224113 224111 GCTCTACCCGCACAA ACGGCCCGCCG TCAG CGGCGCGCCGA TCCTGTCTGTGACCG TERM 141 224140 - 224117 - gf 100 -15.2 -3.87815 | opp_overlap 224116 224113 224111 CTCTACCCGCACAAA CGGCCCGCCG TCAG CGGCGCGCCG ATCCTGTCTGTGACC Smed_5263 223325 - 224917 + | ABC transporter related TERM 142 224921 - 224954 + GF 70 -7.3 -3.9777 | gap 1 CGTACCGGCTGAGGA GGGCACCCGTATCCGC TGG GCCGAT-CTGGCGCCC TTTATCGCTCTTGCA TERM 143 225505 - 225532 + GF 86 -8.4 -4.58395 | gap 1, opp_overlap 225488 GCCGCCGCCTGACCT CGGCCGGC-TCGA ATG TCGAAGTCGCCCG TTTTTCCGGCGTCAA Smed_5264 224883 - 225878 + | monosaccharide-transporting ATPase Smed_5265 225907 - 226875 + | putative ABC transporter, periplasmic solute-binding protein TERM 144 226907 - 226883 - f 81 -12.8 -3.60296 | CATTCTGATCCGAAA CGGTGCCTGG TAGAT CCGGGCACCG CCTGACATCCATGCC Smed_5266 226938 - 227525 + | PfpI family intracellular peptidase TERM 145 227584 - 227550 - T 76 -13.4 -2.82015 | opp_overlap 227550 GTGAGATCGACGACA CCTACCCCTCGGGCTG CAT CGCCCCGAGGGGCGGG TTTCGAAGCCTCCGA TERM 146 227550 - 227584 + T 88 -15.6 -3.54424 | opp_overlap 227550 GTGAGATCGACGACA CCTACCCCTCGGGCTG CAT CGCCCCGAGGGGCGGG TTTCGAAGCCTCCGA Smed_5267 228041 - 227667 - | glyoxalase/bleomycin resistance protein/dioxygenase Smed_5268 228686 - 228108 - | protein tyrosine phosphatase TERM 147 228718 - 228733 + H 80 -4.6 -4.91109 | opp_overlap 228708 228706 228705, overlap 228706 228710 AATCATCGCCGGCCT CTGTCG GCGC CGTCAG TTTTTCTAATAGCAA Smed_5269 228844 - 229074 + | hypothetical protein Smed_5270 229204 - 230130 + | DNA polymerase III subunit epsilon Smed_5271 230589 - 230167 - | endoribonuclease L-PSP TERM 148 231535 - 231549 + G 100 -12.8 -4.42653 | ACACCGAGCCGTGCC GCCCGC ACT GCGGGC TTTTCTCGATGCCGT Smed_5272 230690 - 231592 + | LysR family transcriptional regulator Smed_5273 231919 - 231614 - | hypothetical protein Smed_5274 232992 - 232048 - | LysR family transcriptional regulator TERM 149 232900 - 232946 + g 78 -14.5 -3.05463 | gap 1 GATGCGGTGGCTAAG GGTCGACTTCGGCAGCCGATGC AGGC GCGATG-CTGCCGAAATCGACC TTGCATCCGCCACCT Smed_5275 233109 - 234911 + | adenine deaminase Smed_5276 234959 - 236359 + | xanthine/uracil/vitamin C permease TERM 150 236366 - 236394 + F 100 -21.7 -3.28684 | GTTCAATGATCTCCT CCGGTGGCGTCGC GGT GCGGCGCCGCCGG TTCGTATAGGTACTT Smed_5277 236432 - 238219 + | adenine deaminase TERM 151 239147 - 239164 + G 74 -2.5 -4.83615 | overlap 239149 CTCATGGCCGACATC GAGGCCG TCAT CCGCCGC TTTTTCTCGACCGTC TERM 152 240153 - 240186 + G 81 -12.3 -3.86897 | opp_overlap 240154, overlap 240154 TCAACCTTGCCACGA ATGTCGCCAGCGGCG GAAC CGCCTCGGGCGACAC TTTCTACAGCATCGA TERM 153 240154 - 240185 + G 79 -15.8 -2.91924 | opp_overlap 240154, overlap 240153 CAACCTTGCCACGAA TGTCGCCAGCGGCG GAAC CGCCTCGGGCGACA CTTTCTACAGCATCG TERM 154 240185 - 240154 - g 83 -15.8 -3.14881 | opp_overlap 240154 240153 CAACCTTGCCACGAA TGTCGCCAGCGGCG GAAC CGCCTCGGGCGACA CTTTCTACAGCATCG Smed_5278 238511 - 241849 + | peptidase domain-containing protein TERM 155 241883 - 241862 - f 91 -17.3 -3.14026 | opp_overlap 241849 241845 241843 TAGATCGATAGCGAA TGGGGCGCC TTCA GGCGCCCCA TTCGCAGCGCAGTGC Smed_5279 241913 - 242347 + | hypothetical protein Smed_5280 242938 - 242492 - | 3-demethylubiquinone-9 3-methyltransferase Smed_5281 243884 - 243012 - | NmrA family protein Smed_5282 243945 - 244877 + | LysR family transcriptional regulator TERM 156 245792 - 245780 - g 74 -5.5 -4.3953 | overlap 245781 GCCAACGACAAGAAA CGAGC GCG GCTCA ACTGCATCGACCATC Smed_5283 245012 - 245932 + | hypothetical protein TERM 157 246166 - 246118 - T 83 -14 -3.57561 | GTTCAACGGTTGAAA GGCTCTGGATCGTTTCACTGTC GTTGA AACCGTGAAACGATTCAGAGTC GGCAGGGTCAATGGG Smed_5284 247180 - 246188 - | hypothetical protein TERM 158 246981 - 246999 + g 86 -8.9 -4.54047 | opp_overlap 246993 TGGACGATCACCTGC TGTCCGA GATCA TCGGACA TTTTCTGTGCGATGA TERM 159 247161 - 247136 - G 76 -8.9 -4.21322 | gap 1, overlap 247137 CGAACAGAAAGCAAA CCCGGC-CGCCA TGG CGGCGCGGCGGG TCAAGCTTAGAAATG Smed_5285 248906 - 247452 - | cation transporter TERM 160 247730 - 247716 - G 75 -3.4 -4.89009 | ACAGGTAACGAAAAA CAGGAG GAT CGCCCG CAAGGTGTCGGCGTC TERM 161 248381 - 248356 - G 100 -4.6 -5.45726 | TAGACCGTAAAAAAA GCCCGGCTGA ACGTGG TGAGGCGGGC AAAGGGCTTCTCGTT Smed_5286 249310 - 249089 - | hypothetical protein Smed_5287 251270 - 249324 - | serralysin Smed_5288 252920 - 251976 - | hypothetical protein TERM 162 253364 - 253395 + G 71 -13.8 -2.62396 | gap 1, overlap 253366 GGATGCGCGCATTGC CATTCGGCTGGGCCG TGG CGG-CTGGCCGAATG TCGTCTCGGAGCCTC Smed_5289 252933 - 253823 + | LysR family transcriptional regulator TERM 163 254073 - 254057 - T 71 -10.1 -3.54459 | CGAATGCGCCGGAAA TGCCACC AGC GGCGGCA GGGCCGATGATGAGG TERM 164 254199 - 254174 - T 75 -3.8 -4.72272 | overlap 254175 254177 GTGCGCTATCAAAAA TGACGACGGG GATCAG CCCGCCGGCG AACGAGAAGACGACA Smed_5291 255779 - 255141 - | TrpR binding protein WrbA TERM 165 255253 - 255267 + g 71 -5.6 -4.30576 | TCATTGGCGCTGGGG CTGCGG TCG CCGTGG TTTTCGTCCTCCGCC TERM 166 255923 - 255907 - H 78 -2.9 -5.055 | opp_overlap 255907 255917 255920, overlap 255909 GTAATTGTCAAAAAA TTGACCG AGT CGATCTA TGGAATAGATCATGT Smed_5292 255935 - 256855 + | LysR family transcriptional regulator TERM 167 257005 - 257021 + T 70 -2.2 -4.82901 | overlap 256996 257010 CCGCAACCGGGTCGC CGCC GGTCCTGTG GGCG TTTTTGTGCCAGACC Smed_5294 258097 - 257438 - | glutathione S-transferase domain-containing protein TERM 168 257613 - 257596 - G 74 -6.2 -4.52857 | AGTCGCCATAGAAAA GCGCCG GGGCAG CAGCGC AGTCGGCAATCGTGA Smed_5295 258573 - 258094 - | activator of Hsp90 ATPase 1 family protein Smed_5296 258962 - 258573 - | regulatory protein ArsR TERM 169 258734 - 258749 + g 86 -7.5 -4.67755 | GGGATATGCGGCACT CGCGG GTGCGG CCGCG TTTTTCCGTCACTAT Smed_5297 259172 - 260125 + | short chain dehydrogenase TERM 170 260402 - 260430 + T 100 -18.2 -4.2679 | opp_overlap 260420 GCCAACGGCTAGAGC GACGGGCTGCCT AAAGA AGGCGGCCCGTC TTTTCGTCGCGCTTG Smed_5298 260661 - 260533 - | hypothetical protein Smed_5299 260975 - 260658 - | hypothetical protein Smed_5300 261169 - 260951 - | hypothetical protein Smed_5301 261463 - 261182 - | hypothetical protein Smed_5302 261787 - 262215 + | hypothetical protein Smed_5303 262226 - 262393 + | hypothetical protein Smed_5304 262951 - 262676 - | hypothetical protein TERM 171 262889 - 262905 + g 88 -6.6 -5.14563 | opp_overlap 262859 GCCCTCATGGCCAAG GAAACG GACGG CGTTTC TTTTTTCATCGAAGC Smed_5305 263027 - 263233 + | hypothetical protein TERM 172 263372 - 263389 + G 71 -8.3 -3.86524 | opp_overlap 263357 CTGTCGCCGGAGGTG CGCGCGG CGAT CAGCGCG TTTCTAAGCGCCTGT TERM 173 263630 - 263620 - g 74 -2.4 -4.8622 | overlap 263603 CGGCGCAATTAAAAA CCGG GCG CCCG TCGAAGCTCATGGGA Smed_5306 263318 - 263716 + | hypothetical protein TERM 174 263748 - 263763 + F 72 -4.6 -4.65895 | GCTCAGACGTTCAAT GTCGGC GGAG GCCAAC TTTTTACCTCAGGCA Smed_5307 263929 - 264246 + | hypothetical protein Smed_5308 264328 - 264636 + | hypothetical protein Smed_5309 265585 - 264695 - | helix-turn-helix domain-containing protein TERM 175 264738 - 264764 + g 75 -12.2 -3.61715 | opp_overlap 264762 CGGAAGTCCGACGGC GGCATGCCGGCA ATC TGCCGGAAAGCC TTGTTGAAGGCGCTC Smed_5310 265773 - 267776 + | oxidoreductase domain-containing protein TERM 176 267861 - 267829 - f 72 -8.9 -3.93583 | opp_overlap 267846 CAAGCCATTCACAAA CGCGCCTGCACAGCC GCC GGCCGCTTCGGCGCG ACATCAGCCGTTTCA Smed_5311 267960 - 268268 + | hypothetical protein Smed_5312 269491 - 268376 - | Serine--pyruvate transaminase TERM 177 269509 - 269524 + r 70 -11.8 -2.81547 | overlap 269507 GGGCGATCTCCTGCC GGCCGG TTCC CCGGCC TCGTTGCTATCGGAG Smed_5313 270255 - 269842 - | hypothetical protein Smed_5314 270696 - 270328 - | hypothetical protein TERM 178 272114 - 272128 + r 70 -2.7 -4.81249 | overlap 272105 GGCCATTGCCAGTTC CGGCC CGGGC GGCAG TTTTTCCATTTCACA TERM 179 273426 - 273412 - R 71 -11.4 -3.29739 | overlap 273420 CGCAAGCCAGACGAA CGCGGA AAC TCCGCG CGTCGAGCCCCGCCC Smed_5316 274442 - 273531 - | gluconolactonase Smed_5317 275444 - 274503 - | inner-membrane translocator Smed_5318 276388 - 275441 - | inner-membrane translocator Smed_5319 277881 - 276385 - | ABC transporter related TERM 180 277384 - 277412 + g 73 -11 -3.57797 | gap 1, overlap 277407 GATTTCGACCATCTG GCGCTCGGCGATC GAAA GTTCGCCGA-CGC TTCTGTCGCTTTCGA Smed_5320 278923 - 277907 - | putative ABC transporter TERM 181 278935 - 278958 + H 74 -6 -4.41348 | gap 1, overlap 278936 278946 TCATGTCTCCTCCCT CCGATCCGTCT TAG AG-CGGATCGC TTTATTTAGGGCGCG Smed_5321 279301 - 280554 + | putative signal transduction histidine kinase Smed_5322 280551 - 281270 + | two component LuxR family transcriptional regulator TERM 182 281946 - 281959 + G 72 -4.5 -4.58395 | overlap 281937 ATACGGGCAGCGCCG TAGCG GGGA CGCTG TTTTTCACGAGTGGC Smed_5323 281345 - 282613 + | diguanylate cyclase Smed_5324 283390 - 282632 - | hypothetical protein Smed_5325 285205 - 283427 - | redoxin domain-containing protein TERM 183 285742 - 285768 + r 73 -2.9 -4.8622 | gap 1 GCGGTCGATGCGGAA GTCGATCT-CGC CAAA GCGGAGGGCGGC TTTTTCCTTCGAGCA TERM 184 285995 - 286009 + r 80 -10 -4.07568 | overlap 285988 GTCCTTGCCGCGCCT TGCGTC TAT GACGCA TTTTCGACGGAGCCA TERM 185 286097 - 286130 + r 100 -23.3 -3.97331 | opp_overlap 286101 TGCCGGCAACTCCGA CGAAGGATCGGCCGG GGAA CCGGCTGATCCTTCG TTCTTTCGATGCGTT TERM 186 286126 - 286101 - R 83 -14.7 -3.16742 | opp_overlap 286097 GGCAACTCCGACGAA GGATCGGCCGG GGAA CCGGCTGATCC TTCGTTCTTTCGATG Smed_5327 286803 - 286144 - | TetR family transcriptional regulator TERM 187 287222 - 287210 - g 76 -6.2 -4.57073 | overlap 287212 CAGCGGGCGCAAAAA GGCG AGGCG CGCC TTGAAGAGCTCGAGA Smed_5328 286913 - 288487 + | ABC transporter related Smed_5329 289505 - 288537 - | alcohol dehydrogenase Smed_5330 290154 - 289588 - | TetR family transcriptional regulator Smed_5331 290410 - 292599 + | catalase/peroxidase HPI TERM 188 292640 - 292608 - T 88 -14.2 -3.57144 | gap 1, opp_overlap 292619, overlap 292609 GGTGTGACTGTTAAA GTGCCAGGACGTGGC TTGA GCCATGTCCTGGC-C TCTCGGGCGCGCACA TERM 189 292640 - 292609 - T 80 -14.4 -2.74144 | opp_overlap 292619, overlap 292608 GTGTGACTGTTAAAG TGCCAGGACGTGGC TTGA GCCATGTCCTGGCC TCTCGGGCGCGCACA Smed_5332 293871 - 292690 - | major facilitator transporter TERM 190 293260 - 293249 - G 76 -5.8 -4.63218 | CCGTGCCGAAGAAAA TCGC CATT GCGA AGGATCGACCCATAG Smed_5333 295243 - 293945 - | cytosine deaminase Smed_5334 296211 - 295267 - | inner-membrane translocator Smed_5335 297257 - 296208 - | inner-membrane translocator Smed_5336 298773 - 297247 - | ABC transporter related TERM 191 297939 - 297962 + g 70 -10.4 -3.61178 | CTTCTCCTGCCCGAA GGCTGAAATC TACC GATTTCAGTC TTTCCACTCCATCGA Smed_5337 300185 - 298770 - | amidase Smed_5338 301180 - 300197 - | basic membrane lipoprotein Smed_5339 302594 - 301281 - | aminotransferase class-III TERM 192 301792 - 301775 - G 74 -9.1 -3.90318 | opp_overlap 301781 CCACCACCGCAGAAA TCGGCAG GCCG CCGCCGA GCCCTTTTCCGAAAA Smed_5340 303276 - 302608 - | isochorismatase hydrolase Smed_5341 304301 - 303273 - | inner-membrane translocator Smed_5342 305204 - 304314 - | inner-membrane translocator Smed_5343 305915 - 305208 - | ABC transporter related Smed_5344 306642 - 305908 - | ABC transporter related TERM 193 306226 - 306169 - G 73 -8.4 -3.99592 | gap 3, opp_overlap 306170 306186, overlap 306171 306172 ATCGAGCAGCAGAAA CAGCGGTTCGGCGGCGAGCGCCCGCGCGA TCT CCACGCG-GCGCTTGTCGCCGTA--ACTG AGGTTCTCGCCAAGC TERM 194 306227 - 306171 - G 75 -12.2 -3.58864 | opp_overlap 306170 306186, overlap 306169 306172 CGAGCAGCAGAAACA GCGGTT-CGGCGGCGAGCGCCCGCGCGA TCT CCACGCG-GCGCTTGTCGCCGTAACTGA GGTTCTCGCCAAGCT TERM 195 306226 - 306172 - G 78 -15.7 -2.74836 | opp_overlap 306170 306186, overlap 306169 306171 GAGCAGCAGAAACAG CGGTT-CGGCGGCGAGCGCCCGCGCGA TCT CCACGCG-GCGCTTGTCGCCGTAACTG AGGTTCTCGCCAAGC Smed_5345 307865 - 306693 - | extracellular ligand-binding receptor Smed_5346 308645 - 307992 - | isochorismatase hydrolase Smed_5347 309447 - 308632 - | N-formylglutamate amidohydrolase Smed_5348 309602 - 310501 + | RpiR family transcriptional regulator TERM 196 310511 - 310530 + G 71 -10.7 -3.53444 | opp_overlap 310510 310507, overlap 310514 310515 ACGTGAGGAAATGAT GGTCGCC TGCTGC GGCGACC TTTCAGGCAAGGTGC Smed_5349 310491 - 311804 + | glutamine synthetase catalytic region Smed_5350 312315 - 311872 - | methionine sulfoxide reductase B Smed_5351 312488 - 313762 + | sodium/hydrogen exchanger Smed_5352 314596 - 313859 - | putative adenylate/guanylate cyclase TERM 197 316394 - 316421 + r 100 -9.1 -4.88711 | opp_overlap 316394, overlap 316388 CGGTTCTTTCGGAAA GCCTGCCGC ACCTCCTCCC GCGGCGGGC TTTTTCGTATCTTGT Smed_5353 317621 - 316485 - | DNA polymerase IV Smed_5354 319972 - 317774 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 198 318818 - 318792 - G 95 -10.8 -4.56597 | opp_overlap 318802 318806 TTGCGGTGCGAAAAA GGTCTTTCCGGA TTC TCCGGATCGACC TGAGTATCGTTGATG TERM 199 320076 - 320088 + r 77 -10.5 -3.794 | opp_overlap 320072 TCCTTCGAGAAGCTT GGCGG CGG CCGCC TTTGCTCCGTTAGGC TERM 200 320480 - 320532 + r 78 -6 -4.63486 | gap 1, opp_overlap 320479, overlap 320495 320499 GCTGACGCCAACCAC GGCAAGCGGGCGGCTGAAG-CCGGC GAGC GCCGAACAGCCGCTTCCCGGTTGCC TTTTGTTGCAGGGCT Smed_5356 321558 - 320923 - | putative xanthine dehydrogenase iron-sulfur-binding subunit TERM 201 321834 - 321846 + G 76 -10.5 -3.86421 | overlap 321832 TGTGCCGCAGCTTCT GCCGG ATC CCGGC TCTTTATCTTTTCTT TERM 202 321970 - 321984 + G 76 -9.2 -4.02022 | GCCCTTTTCCTTGCT GCCGCC ATC GGTGGC TTTGTGGTGCTTGCG Smed_5357 321820 - 322029 + | hypothetical protein TERM 203 323014 - 323024 + G 79 -8.2 -4.2704 | overlap 322983 GGCTGGGCCTTCGCC GCGG TTA CCGC TTTCTTCCTGATCGC Smed_5358 322150 - 323859 + | potassium-transporting ATPase subunit A TERM 204 324371 - 324337 - g 90 -18 -2.90075 | gap 1 CTTCGGTCAACGAGA GCGCGATCACCGGCG AATCGG CGCCGGTGATC-CGC GAGGCGGGCGGCGAC Smed_5359 323871 - 325913 + | potassium-transporting ATPase subunit B TERM 205 326420 - 326398 - g 72 -7.6 -4.1891 | opp_overlap 326398, overlap 326394 CCTCGTTAAGAGAAA TGCCCAAGGG CGT CTCATGGGCA TCATAGGCGAGCCGC Smed_5360 325916 - 326485 + | potassium-transporting ATPase, C subunit TERM 206 327125 - 327138 + G 81 -3.7 -5.03314 | CCAGAGAATGCCAGT CGCGC CGCG GAGCG TTTTTTCCGGCTCGG TERM 207 327699 - 327681 - g 72 -4.5 -4.62168 | opp_overlap 327697 327698 AGCGAAAGCATAAAA GAGCCTT GCCAG AGGGCTC CGGCCGCGCCTTGGC TERM 208 328202 - 328181 - g 80 -14.4 -3.12351 | GGCGGGGAGATCGAA CCGGCGGC GGCCTG GCCGCCGG ATACCGAACTTGGCG Smed_5361 326504 - 329197 + | osmosensitive K+ channel signal transduction histidine kinase TERM 209 329489 - 329462 - g 95 -9.9 -4.51196 | opp_overlap 329461 GTGAAAGCGAGAAAA TCG-CGGCGCTCG ACCT CG-GCGCCGACGA CTATATCGAGAAGCC Smed_5362 329194 - 329886 + | two component transcriptional regulator TERM 210 330033 - 330065 + F 100 -9.2 -5.00616 | gap 1, overlap 330035 TGATGATGGGCCAGG TTGCCTC-CGTGTGC CACC GCACATGTGAGGCCA TTTTTTCGAGGCGGC TERM 211 330035 - 330063 + F 70 -11.8 -2.75708 | gap 1, overlap 330033 ATGATGGGCCAGGTT GCCTC-CGTGTGC CACC GCACATGTGAGGC CATTTTTTCGAGGCG TERM 212 330538 - 330574 + G 87 -19.3 -2.78384 | GATTTCTGGATGCCG CCGGCGGCGGCGGCTGG GGG CCGGTCGCCACCACCGG TCTGCTCGGCGCCGG Smed_5363 330105 - 330878 + | hypothetical protein Smed_5364 332026 - 330875 - | HPP family protein? Smed_5365 332196 - 332489 + | hypothetical protein Smed_5366 332792 - 332520 - | hypothetical protein Smed_5367 334749 - 333016 - | peptidoglycan glycosyltransferase TERM 213 333179 - 333159 - G 71 -12.5 -3.02144 | opp_overlap 333144 GGATGCGCTGGAATA CGGCGCCGC CGA ACGGCACCG CATTCCAGCCCGAGG TERM 214 338301 - 338263 - g 81 -10.3 -4.18018 | gap 1, opp_overlap 338281 TGCTGGCATTCAAAA GGT-GGCTGAAGGAGCAG TTCT CCGGTCCTTCCGCCGACC TGTAGAAGCCGGGTG Smed_5369 337422 - 338306 + | LysR family transcriptional regulator Smed_5370 338535 - 338681 + | hypothetical protein TERM 215 338708 - 338732 + T 75 -10.7 -3.75332 | gap 1, opp_overlap 338697, overlap 338709 ACCATCGCTTCGCAA G-CGCCCGCC CGATGA GGCGGGCGTC TTTGCGTTCGGGCAT TERM 216 338709 - 338730 + T 87 -14.4 -3.46068 | opp_overlap 338697, overlap 338708 CCATCGCTTCGCAAG CGCCCGCC CGATGA GGCGGGCG TCTTTGCGTTCGGGC TERM 217 338983 - 338956 - T 81 -12 -3.72576 | opp_overlap 338956 GGTTCTTTTAGGAAA GCCTGCCGCA CCTCCTCC CGCGGCAGGC TTTTTCGTTTCTGGC TERM 218 338956 - 338983 + T 100 -11.3 -5.04601 | opp_overlap 338956 GGTTCTTTTAGGAAA GCCTGCCGC ACCTCCTCCC GCGGCAGGC TTTTTCGTTTCTGGC Smed_5371 339226 - 339017 - | hypothetical protein Smed_5372 340004 - 339285 - | 5-formyltetrahydrofolate cyclo-ligase TERM 219 339326 - 339351 + g 77 -13.3 -3.54436 | TGGTAGAGTCGGTTA CCACGACGTCC ATTC GAACGTCGTGG TTCTGTGGGTATATC TERM 220 340300 - 340311 + r 81 -3 -5.31545 | opp_overlap 340294, overlap 340294 340307 CGAATTGAATTGCTG TTTG ACCG CAAA TTTTTTGCTCTTATT Smed_5373 341213 - 340371 - | LysR family transcriptional regulator TERM 221 340707 - 340725 + g 78 -4.6 -4.67982 | GCCCATTGCGGGATC GCTTGT CGCAAGC ACAAGC TTTTCTTCCATCAGC TERM 222 342483 - 342455 - g 81 -16.7 -2.78463 | opp_overlap 342447, overlap 342430 ATCGGTCCCACGATA GCCGTGGCCGGCA CGC TGCCGGTCACAGC GGACAACGTTCTCAG Smed_5375 341930 - 342550 + | autoinducer synthesis protein Smed_5376 342561 - 343538 + | P-type conjugative transfer ATPase TrbB Smed_5377 343528 - 343908 + | conjugal transfer protein TrbC Smed_5378 343901 - 344197 + | conjugal transfer TrbD family protein TERM 223 345096 - 345116 + GF 74 -4.6 -4.57073 | opp_overlap 345096 345097, overlap 345097 CGCACACGCAAGAAA TGGCAGCA GAAGG TGCGGCCG TTTTTCGACCAGCTG TERM 224 346583 - 346553 - gf 73 -11.3 -3.35597 | gap 1, overlap 346551 GGCATCGGGGAAAGA GGATTTGAA-GCGC ATCC GCGCACTCAAATCC GAGCATGGCCGCGAT Smed_5379 344208 - 346661 + | type IV secretion/conjugal transfer ATPase Smed_5380 346636 - 347436 + | P-type conjugative transfer protein TrbJ Smed_5381 347433 - 347633 + | hypothetical protein Smed_5382 347627 - 348835 + | P-type conjugative transfer protein TrbL Smed_5383 348813 - 349475 + | conjugal transfer protein Smed_5384 349492 - 350304 + | P-type conjugative transfer protein TrbG Smed_5385 350308 - 350748 + | conjugal transfer protein H Smed_5386 350761 - 352053 + | conjugation TrbI family protein TERM 225 352388 - 352378 - g 77 -2.4 -5.00765 | AACGAATGATAAAAA GTGC AGT GCTC AGCTTCGCCAACGCT TERM 226 352400 - 352417 + G 73 -7 -4.26188 | GCTCAGCTTCGCCAA CGCTCA TGGTTT TGAGCG TTTTGCGTATCTGCA Smed_5387 352053 - 353015 + | autoinducer-binding domain-containing protein Smed_5388 353342 - 353019 - | conjugal transfer transcriptional regulator (repressor) protein TERM 227 353542 - 353510 - H 100 -12.1 -5.26918 | opp_overlap 353512, overlap 353512 ACATGTGACAAAAAA TAGGAACTATCGTTC CTG GAACGATCGTTCCTT TTGGGTTTGGATCAG TERM 228 353540 - 353512 - H 100 -14.7 -4.26475 | opp_overlap 353512, overlap 353510 ATGTGACAAAAAATA GGAACTATCGTTC CTG GAACGATCGTTCC TTTTGGGTTTGGATC TERM 229 353512 - 353540 + H 100 -14.7 -4.36595 | opp_overlap 353510 353512 ATGTGACAAAAAATA GGAACTATCGTTC CTG GAACGATCGTTCC TTTTGGGTTTGGATC Smed_5389 353561 - 353773 + | XRE family transcriptional regulator Smed_5391 355726 - 354563 - | TraB family protein TERM 230 354812 - 354801 - G 74 -5.8 -4.42806 | overlap 354802 GGATTGGCAAAGAAA TGCG CCCG CGCA CCGCCGGTCTCACCG Smed_5392 356282 - 355716 - | peptidase S26C conjugative transfer signal peptidase TraF TERM 231 356013 - 356040 + g 78 -14.9 -3.08679 | opp_overlap 356011 356010 356007, overlap 356026 356035 GCCAGGACACAACCC GGCGCGAAGGT AACCGC GCCTTCGCGCC TCTTGCATGGCCGCG TERM 232 356144 - 356128 - G 74 -13.7 -2.90982 | overlap 356119 ACAAAGCGCCAGAGA CCGAGCG GCT CGCTCGG CGTGAGATTGATGCG Smed_5393 359587 - 356279 - | Ti-type conjugative transfer relaxase TraA TERM 233 358822 - 358874 + g 76 -13.4 -3.14132 | gap 1 CCTCCTGTAGCTGCA GGCGCTCGAGC-GAAAGCGTCTTCG CCTC TGCCGTCGCTTTCCGCTCGATCGCC TTCGTGCCGGCGCCG TERM 234 359682 - 359667 - H 75 -10.4 -3.7732 | opp_overlap 359667 GGCTGAGAGCAAGAA CGTCGC CCTG GCGACG TATAATTGCGCCCTT Smed_5394 359842 - 360138 + | TraC family protein Smed_5395 360143 - 360358 + | conjugal transfer TraD family protein TERM 235 360497 - 360525 + G 83 -4.6 -5.0916 | gap 1, overlap 360506 CGGTATCGCCGTGCC TTACGTC-AGCGC CGCA GCGATCGGCGTAA TTTTTCTATTCGCAA Smed_5396 360345 - 362264 + | Ti-type conjugative transfer system TraG Smed_5397 363564 - 362653 - | hypothetical protein Smed_5398 363688 - 364155 + | WGR domain-containing protein TERM 236 364410 - 364435 + T 79 -12.5 -3.4252 | opp_overlap 364412, overlap 364412 TTCTTGGAAGGAGGA TAGGCCCCGCC TTGC GGCGGAGCCTG TTCTCCTCAATCCCG TERM 237 364412 - 364433 + T 79 -12.9 -3.28447 | opp_overlap 364412, overlap 364410 CTTGGAAGGAGGATA GGCCCCGCC TTGC GGCGGAGCC TGTTCTCCTCAATCC TERM 238 364433 - 364412 - T 83 -15.1 -2.86164 | opp_overlap 364412 364410 CTTGGAAGGAGGATA GGCCCCGCC TTGC GGCGGAGCC TGTTCTCCTCAATCC Smed_5399 364753 - 364442 - | hypothetical protein Smed_5402 365939 - 366163 + | XRE family transcriptional regulator TERM 239 366235 - 366215 - T 71 -11.1 -3.29144 | opp_overlap 366215 366216, overlap 366216 GCAGGCTGGGGAGAA CGGCCGACA AAT TGCCGGCCA TTTGGCGGATCAAAC TERM 240 366275 - 366263 - T 72 -4.7 -4.57341 | AACCTGGTTCAAAAA GGCCG AAC CCGCC TGATCCATTTGAGGG Smed_5404 368478 - 366745 - | sulphate transporter TERM 241 368211 - 368197 - G 73 -8.5 -4.07455 | GACCAACACGATAAA GGCCC CGGCC GGGCC GCCTATCTGAAATCG Smed_5405 368811 - 368551 - | XRE family transcriptional regulator Smed_5406 369069 - 370214 + | phage integrase family protein Smed_5407 370285 - 371223 + | phage integrase family protein TERM 242 372008 - 371976 - gT 83 -12 -3.90291 | AGCCTCGCAAGCAAA CGTGTTACGCCGCA TACTT TGCGGCACAGCACG GCGATGGAACTGCTT Smed_5409 372897 - 372115 - | hypothetical protein Smed_5408 371220 - 372212 + | phage integrase family protein TERM 243 372417 - 372430 + gF 72 -4.5 -4.59511 | overlap 372404 TGCCGCCGTAGGTGA CACTG GCGC CGGTG TTTTTGACGAATGTT Smed_5410 373301 - 373543 + | hypothetical protein Smed_5411 375172 - 373928 - | peptidase T TERM 244 374111 - 374126 + g 74 -9 -3.93288 | overlap 374117 GCCATCGGTGCCGCC GCGCAT CGGA ATGCGC TTTCGTTCAATCCCG TERM 245 374683 - 374666 - G 73 -12.7 -3.14132 | overlap 374677 CTCGTCCGGCACGAA GGCGACG AAGA CGTCGCC ATGGGCGCCTTGCGC Smed_5412 376527 - 375289 - | hypothetical protein TERM 246 375685 - 375664 - G 71 -8.7 -3.91897 | opp_overlap 375676 GCCGTGACTGACAAA CATGGACGC GCCT GCGTCGATG CATCGTTTGGCCACA Smed_5413 378288 - 376615 - | ABC transporter related Smed_5414 379172 - 378285 - | binding-protein-dependent transport systems inner membrane component Smed_5415 380161 - 379187 - | binding-protein-dependent transport systems inner membrane component Smed_5416 381772 - 380168 - | extracellular solute-binding protein TERM 247 380559 - 380546 - G 91 -9.5 -4.43272 | opp_overlap 380547, overlap 380547 ATTGAAAACCGAAAA CGGCG CCGC CGCCG GCTGCACCTTTACTC Smed_5417 381932 - 382150 + | XRE family transcriptional regulator Smed_5418 382786 - 382208 - | hypothetical protein Smed_5419 382914 - 383162 + | hypothetical protein Smed_5420 383826 - 384140 + | hypothetical protein Smed_5421 384289 - 384495 + | cold-shock DNA-binding domain-containing protein TERM 248 384609 - 384628 + G 86 -16.4 -3.20858 | opp_overlap 384596 384594 GACCGATGCCATTTG CGGCCGCC ACGT GGCGGCCG TTCATGCATCTGGTG Smed_5422 384554 - 384877 + | hypothetical protein Smed_5423 384891 - 385322 + | hypothetical protein Smed_5424 385319 - 385801 + | RES domain-containing protein Smed_5425 386034 - 386336 + | hypothetical protein Smed_5427 387359 - 387652 + | hypothetical protein TERM 249 387637 - 387674 + F 76 -12.7 -3.05384 | opp_overlap 387636 387647 387659 GGACGCGATAGAAGC GGTCGCCAAATCGTAGC AGAA GCTGCGACTTGGCGGCA TTAACTCGCCGCCAG Smed_5428 387846 - 388103 + | hypothetical protein Smed_5429 388363 - 388145 - | hypothetical protein Smed_5431 390356 - 389181 - | phage integrase family protein TERM 250 390414 - 390389 - R 83 -5.5 -5.00616 | opp_overlap 390390 390392, overlap 390390 390392 CTCTTGGGTAAAAAA TTACGGAACAT CCGT ATATTCCGGAA AAAGGAGTTACGCGA Smed_5432 390849 - 390448 - | PilT domain-containing protein Smed_5433 391187 - 390846 - | hypothetical protein Smed_5434 391471 - 392139 + | hypothetical protein TERM 251 392812 - 392794 - f 75 -11.7 -3.31144 | TCCTTACCTTCAGAA CGGTCGC GAGGT GCGACCG AGACAGGGGGTCAAG TERM 252 394847 - 394834 - g 86 -8.1 -4.65895 | overlap 394836 394837 GTTTCCACGGAAAAA GAGCC GGAC GGCTC GTCGCCGTCGGTCCG TERM 253 395133 - 395149 + G 73 -2.9 -4.76312 | overlap 395134 AAAGGTGGCAGCATC GCTGTCG AAC TGACAGA TTTTTCGGTGTTCTA Smed_5436 393468 - 395591 + | site-specific DNA-methyltransferase (adenine-specific) Smed_5437 395591 - 398272 + | type III restriction protein res subunit TERM 254 398285 - 398309 + T 93 -12.2 -4.35524 | TGACCATCGTTATCG CGAACCGCAG CACAA TTGCGGTTCG TTTTGAATTTCACGG TERM 255 398721 - 398737 + T 84 -3.7 -5.24531 | CTTTGGTTTTTGTCT GAAACTC GAT GACTTTC TTTTTTCTGGGCCGT Smed_5438 399969 - 399088 - | hypothetical protein Smed_5439 400472 - 399972 - | hypothetical protein Smed_5440 404011 - 400856 - | UvrD/REP helicase Smed_5441 406565 - 404004 - | hypothetical protein Smed_5442 407618 - 406638 - | transcriptional regulator TERM 256 406786 - 406810 + g 78 -15.7 -2.79183 | opp_overlap 406789 AAACGTACCTCGAAC CGACCGTCGGG AAG CTCGGCGGTCG TCTGCTCAGGATGGA TERM 257 407343 - 407381 + g 79 -13.9 -3.53091 | CGAGCCAGTGAACTG GGCGATCGCGAGATC AAGTGCGGC GAGCTCGCGGTCGCC TTTCAGAGCCAGAGT Smed_5443 408066 - 408662 + | hypothetical protein TERM 258 409076 - 409047 - g 73 -3.5 -4.7033 | gap 1, opp_overlap 409066, overlap 409040 409048 409049 TAATTGAAGACAAAA TCTC-TGCCGCACC GGG AGTGCGTCAGGCGA AGCGTTATCACGCTT Smed_5444 408809 - 409774 + | hypothetical protein TERM 259 410005 - 410034 + T 72 -9.3 -3.70902 | overlap 410009 CCTTAAATAAAGGTT CTGTGTCGCCAGT CTCT ACTGGTGACTTAG TTTGGATCTGGACAC TERM 260 410009 - 410030 + T 74 -10.9 -3.55866 | overlap 410005 AAATAAAGGTTCTGT GTCGCCAGT CTCT ACTGGTGAC TTAGTTTGGATCTGG Smed_5445 411425 - 410479 - | transposase TERM 261 411065 - 411079 + g 90 -2.1 -5.42259 | gap 1, overlap 411069 GGCCGGTTTTGCTCC GAG-GC ATGC GCACTC TTTTTTTGCGCGTGA Smed_5446 411517 - 411843 + | hypothetical protein TERM 262 411963 - 411977 + F 71 -7.1 -4.19817 | opp_overlap 411961 411963 AATCGCGCAGAAATA CCGCA ATCCG TGCGG TTTTGACTGCCTCCA TERM 263 412350 - 412340 - g 86 -6.8 -5.00616 | opp_overlap 412340 GTTGGGTCGAAAAAA CCCT CCG AGGG TTTCGTGATGCTAAT Smed_5447 412019 - 412495 + | hypothetical protein TERM 264 412798 - 412834 + T 72 -8.6 -3.86524 | gap 1, opp_overlap 412793 412797 412794, overlap 412799 ATGGTTTAAAGGGAG C-GGACTGCCGCGACAC TTCT GCGGCACGGCAGTCCTG TTTGTCAGGCCGTCT TERM 265 412799 - 412832 + T 77 -12.3 -3.52113 | opp_overlap 412793 412797 412794, overlap 412798 TGGTTTAAAGGGAGC GGACTGCCGCGACAC TTCT GCGGCACGGCAGTCC TGTTTGTCAGGCCGT Smed_5448 414796 - 412907 - | adenylyl cyclase class-3/4/guanylyl cyclase TERM 266 414199 - 414179 - G 70 -7.5 -4.07568 | overlap 414180 GGCCGTCGGCCAAAA CTGCCAGGC TGC GCCTGCCAA AACAAGAAGAAGGGC Smed_5449 415920 - 415102 - | alpha/beta hydrolase fold Smed_5451 418307 - 416697 - | transposase IS204/IS1001/IS1096/IS1165 family protein Smed_5452 418446 - 419801 + | hypothetical protein Smed_5453 419996 - 420613 + | hypothetical protein Smed_5454 420606 - 421475 + | hypothetical protein Smed_5455 422507 - 421566 - | ribokinase-like domain-containing protein TERM 267 422408 - 422374 - G 88 -16.5 -3.28791 | gap 1, opp_overlap 422373 ACTGCGCCGGCATAA GCCGTCTCCGCCC-CC GCGC GGCGGGCAAAGACGGC ATGGTTCACGCAATT Smed_5456 423856 - 422750 - | alanine racemase TERM 268 424226 - 424213 - g 71 -5.2 -4.51174 | GGAGTACAAGGAAAA CGGC GTAAAG GCCG CGGTCTTCAACGATT Smed_5457 424100 - 424945 + | extracellular solute-binding protein TERM 269 424989 - 424949 - f 79 -13.4 -3.15544 | gap 3, opp_overlap 424956 GCGGACCTCTAGGAA CGCCCCACCCGGCCC-GAG CTTTTC CTCCGGGCCGGG-GGG-CG CTTGCGACCGGCACA Smed_5458 425015 - 425938 + | polar amino acid ABC transporter, inner membrane subunit Smed_5459 425935 - 426726 + | ABC transporter related Smed_5460 427669 - 426731 - | ornithine cyclodeaminase/mu-crystallin Smed_5461 428390 - 427680 - | GntR family transcriptional regulator TERM 270 427863 - 427881 + g 74 -13.1 -3.28712 | CTGCCGCTCTGCATG GGCCGGC TCAAT GCCGGCC TTGTCGCGCAAGGCG Smed_5462 429410 - 428409 - | sugar isomerase (SIS) TERM 271 429088 - 429119 + g 79 -13.7 -3.53012 | opp_overlap 429058 429056 GCGAGGGGGGAGGCG GGCTCCACCGTCA GGCCGA TGGCGGTGGCGCC TTTCGAACGGGCGAA TERM 272 429491 - 429453 - H 78 -8.9 -4.15006 | ATACGTATTGTAAAA TTCGCGAAGGTGTCAAG CGGAC CTTGACACCCCGGCCAA AACTTTGCGAACGTT Smed_5463 429476 - 431041 + | FAD dependent oxidoreductase TERM 273 431148 - 431175 + G 73 -6.4 -4.26188 | gap 1, overlap 431152 GACAGAATATGGCAC TTGATGAGCGCAG TAT CTGCG-TCATGAA TTTTCACTATGTGCG Smed_5464 431141 - 431980 + | xylose isomerase domain-containing protein Smed_5465 431997 - 434069 + | NADH:flavin oxidoreductase/NADH oxidase Smed_5466 434586 - 434783 + | hypothetical protein Smed_5468 435582 - 437003 + | FAD linked oxidase domain-containing protein Smed_5469 437084 - 438169 + | extracellular solute-binding protein Smed_5470 438231 - 439325 + | spermidine/putrescine ABC transporter ATPase subunit Smed_5471 439329 - 441095 + | binding-protein-dependent transport systems inner membrane component Smed_5472 441133 - 442053 + | dihydrodipicolinate synthetase TERM 274 442099 - 442072 - f 72 -9 -3.85817 | opp_overlap 442073, overlap 442059 442073 ATCTGGCCCGACAAA GGCGGAGCCCGC GAAC GTGGGCTCCACT TCATGCTCCACTCAA TERM 275 442098 - 442073 - f 74 -12.5 -2.91276 | opp_overlap 442073, overlap 442059 442072 TCTGGCCCGACAAAG GCGGAGCCCGC GAAC GTGGGCTCCAC TTCATGCTCCACTCA TERM 276 442073 - 442098 + F 79 -12.5 -3.21747 | opp_overlap 442059 442073 442072 TCTGGCCCGACAAAG GCGGAGCCCGC GAAC GTGGGCTCCAC TTCATGCTCCACTCA TERM 277 442140 - 442120 - f 73 -12.5 -2.75992 | overlap 442117 CTCCACTCAACATGA CCGGCGACC CGA GGTCTCCGG ACGAGGAACGCCCGA Smed_5473 442155 - 442988 + | regulatory protein IclR Smed_5474 443022 - 443843 + | pyrroline-5-carboxylate reductase Smed_5475 443930 - 445120 + | L-lactate dehydrogenase (cytochrome) Smed_5476 445834 - 445160 - | histidinol-phosphate phosphatase, putative TERM 278 447858 - 447840 - R 75 -5.8 -4.56597 | overlap 447841 TGCCGGCCCCAAAAA GGCGCGCG TGG CGCTGGCC CGCAAGCTGGCGGTG Smed_5479 448554 - 448255 - | XRE family plasmid maintenance system antidote protein Smed_5480 448858 - 448583 - | plasmid maintenance system killer Smed_5485 451073 - 451945 + | formate dehydrogenase family accessory protein FdhD mobA 451938 - 452561 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 279 452602 - 452618 + F 82 -10.1 -4.14511 | opp_overlap 452601 452599 452602, overlap 452601 CACCACACGAAATAC CGGCACC GTC GGTGTCG TTTTGCACTGGGCTT TERM 280 453864 - 453886 + G 85 -14.9 -3.56972 | overlap 453860 CGGCGATGGCGCCCG CCGGATCGC ACCGG GCGATCCGG TTCGTTTCCTCCCCT Smed_5487 452638 - 453921 + | molybdenum cofactor synthesis domain-containing protein TERM 281 454323 - 454309 - g 78 -7 -4.65916 | overlap 454311 CCGATGCGAAGAAAA CGGCCG CGA CGGCTG ATCAACAGGCAAAGC Smed_5488 454092 - 454793 + | hypothetical protein Smed_5489 456331 - 455306 - | formate dehydrogenase, gamma subunit Smed_5490 457150 - 456554 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 282 456932 - 456911 - G 80 -14.5 -3.17194 | opp_overlap 456916 ATCCTTGGAATGCAA CACCACTGC ATCC GCAGTGGTG TAAAAACAGTCAACG Smed_5491 460085 - 457164 - | molybdopterin oxidoreductase TERM 283 458660 - 458688 + g 77 -13.1 -3.57144 | opp_overlap 458652 458654, overlap 458664 GTACGAACATCGACC GCACGACGTCGGG TTG CCCGACGTCTTCC TTTGGCAGTGAAACC TERM 284 458664 - 458684 + g 93 -16.9 -3.52204 | opp_overlap 458652 458654, overlap 458660 GAACATCGACCGCAC GACGTCGGG TTG CCCGACGTC TTCCTTTGGCAGTGA TERM 285 459902 - 459918 + g 73 -2.9 -4.70659 | overlap 459884 CGCCCGGTTGCGGGG GGCTG ATTGCGG CGGCC TTTTTGACTGTGCCG Smed_5492 460302 - 460093 - | formate dehydrogenase region TAT target Smed_5493 461054 - 460347 - | cytoplasmic chaperone TorD family protein Smed_5494 461855 - 461127 - | hypothetical protein Smed_5495 462366 - 461848 - | molybdopterin-guanine dinucleotide biosynthesis protein A Smed_5496 463393 - 462377 - | hypothetical protein Smed_5497 463932 - 463390 - | hypothetical protein Smed_5498 464669 - 463923 - | hypothetical protein TERM 286 464966 - 464976 + G 72 -2.4 -4.7373 | opp_overlap 464955 GATAGCCTGCACTCA GCAG GAA CCGC TTTTTCGTGAAGTCG Smed_5499 464775 - 466814 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Smed_5500 468111 - 466816 - | cytochrome c class I TERM 287 466869 - 466846 - G 72 -3.8 -4.62069 | gap 1, opp_overlap 466862, overlap 466847 466848 CTCGGACTGCAAAAA GCGGATCAGCG CTG CAC-GATCCTC GGGATCGTTGATCGT Smed_5501 468212 - 468418 + | hypothetical protein Smed_5502 469410 - 468535 - | DNA binding domain-containing protein Smed_5503 469468 - 470193 + | binding-protein-dependent transport systems inner membrane component Smed_5504 470195 - 470917 + | ABC transporter related Smed_5505 470939 - 471763 + | extracellular solute-binding protein TERM 288 472589 - 472623 + G 71 -10.7 -3.53012 | gap 1, opp_overlap 472587, overlap 472599 CCTGGCGATACCACG GCGATCGGGCGGCTTG GCAG CACGCCG-CTGGTCGC TTTGGCCGGGGCGCC TERM 289 472809 - 472821 + G 83 -7.7 -4.65895 | CCATTTGGACGCCGC TTGCC GTT GGCAA TTTTTCACTGGAGGC Smed_5506 471809 - 472936 + | molybdopterin binding domain-containing protein Smed_5507 472946 - 474895 + | molybdenum cofactor synthesis domain-containing protein Smed_5508 475500 - 475024 - | helix-turn-helix domain-containing protein TERM 290 475777 - 475753 - H 70 -4.1 -4.67556 | opp_overlap 475759 475763, overlap 475756 ACAAGACTCGAAAAA CTACCCTCCGC CGC GCGGAATGCGG ATTTCTCCTTCGAGA Smed_5510 476541 - 477299 + | putative fimbrial chaperone protein Smed_5511 478383 - 477820 - | yecA family protein TERM 291 478056 - 478089 + g 72 -7.3 -4.24002 | TGGCATCAAAGGTCT GATCATCGATCCTGG TGAA CCTGGGCCGGTGGTC TTTTGGCGTTTCGGC TERM 292 478093 - 478123 + g 70 -10.4 -3.65812 | overlap 478094 GGGCCGGTGGTCTTT TGGCGTTTCGGCGA GGC TCGCCGAGATGCGG TTATATTCCGCAACG Smed_5512 479252 - 478380 - | transposase IS66 Smed_5513 480565 - 479306 - | RNA-directed DNA polymerase (Reverse transcriptase) Smed_5514 481839 - 481078 - | transposase IS66 TERM 293 481474 - 481431 - G 74 -12.7 -3.31144 | gap 3, overlap 481434 GTTTGACCCGGACAA CAGCCGGCAC-GATGTCGAGCG CCT CGCT-GACATCCGTGCCGA-TG CAATGCAGGTCGAAC TERM 294 481472 - 481434 - G 76 -15.5 -2.53271 | overlap 481431 TGACCCGGACAACAG CCGGCAC-GATGTCGAGCG CCT CGCT-GACATCCGTGCCGA TGCAATGCAGGTCGA Smed_5515 482244 - 481888 - | IS66 Orf2 family protein Smed_5516 482711 - 482241 - | transposase IS3/IS911 family protein TERM 295 482834 - 482861 + r 74 -7.7 -4.15044 | opp_overlap 482830 ATTAGGGAAGACGCT CGGCGTTAGCC GAACGG GGGTAACGTCG TTTATTCGGGAGCAA Smed_5517 483519 - 482863 - | isochorismatase hydrolase Smed_5518 484078 - 483536 - | hypothetical protein TERM 296 484116 - 484137 + r 83 -14.4 -3.11222 | opp_overlap 484113, overlap 484120 GCGAGGATGAGAGGT CGGCGCGG AGCGCC CCGCGCCG CTTTTGAGATTCAAA TERM 297 484120 - 484138 + r 88 -11.6 -4.19506 | opp_overlap 484113, overlap 484116 GGATGAGAGGTCGGC GCGGAGCG CCC CGCGCCGC TTTTGAGATTCAAAT Smed_5519 485440 - 484148 - | epocide hydrolase domain-containing protein TERM 298 484462 - 484477 + g 80 -4.6 -4.88067 | overlap 484464 TGTCGAGGACGTCGT CAGGGC TAAG GCCCTC TTTTTCTCCGTCAAT TERM 299 484464 - 484475 + g 70 -7.2 -4.06182 | overlap 484462 TCGAGGACGTCGTCA GGGC TAAG GCCC TCTTTTTCTCCGTCA Smed_5521 486115 - 485753 - | response regulator receiver protein Smed_5522 488762 - 486135 - | PAS/PAC sensor signal transduction histidine kinase Smed_5523 489240 - 488872 - | response regulator receiver protein Smed_5524 491630 - 489240 - | PAS/PAC sensor signal transduction histidine kinase TERM 300 489327 - 489343 + g 76 -6.5 -4.41177 | opp_overlap 489326, overlap 489329 GGCGCCACCAGAAGG TCTGGGC TCC GCCCATA TTTTCCCTTTGTGTG TERM 301 489329 - 489341 + g 71 -9.1 -3.79633 | opp_overlap 489326, overlap 489327 CGCCACCAGAAGGTC TGGGC TCC GCCCA TATTTTCCCTTTGTG TERM 302 490517 - 490499 - G 76 -7.4 -4.2558 | opp_overlap 490499 CATCCGTCATCAAAA GCCGATGC TCT ACATCGAC ATTCTCTCCGCGGTT TERM 303 490729 - 490747 + g 81 -7.3 -4.44667 | overlap 490730 TGGGCCTGGGCCATC AGCGCCG CACTA CGGCGCA TTTCTTCTTCAAACC TERM 304 491053 - 491041 - G 83 -4.7 -5.00616 | overlap 491042 491043 TGTTCGTTGAAAAAA TCGGC TCG GCCGT CGGGAAGTGTCGACC Smed_5525 492291 - 491635 - | hypothetical protein Smed_5526 492501 - 493454 + | LysR family transcriptional regulator Smed_5529 494662 - 493994 - | glyoxalase/bleomycin resistance protein/dioxygenase Smed_5530 494862 - 496157 + | epocide hydrolase domain-containing protein Smed_5531 496252 - 497061 + | short-chain dehydrogenase/reductase SDR Smed_5532 497144 - 498175 + | D-cysteine desulfhydrase Smed_5533 498212 - 498805 + | NADPH-dependent FMN reductase TERM 305 498823 - 498852 + F 100 -15.9 -3.81339 | opp_overlap 498819 AGCAGGAATCATCGA GCGTCAAGGAAAT GCAA GTTTCCTTGACGC TTTCGCTTCTCGGTC TERM 306 499648 - 499627 - g 70 -13 -2.91144 | overlap 499624 TGAGGCTGCAAATCA CGAGGCCG AAAGCA CGGCCTCG ATCGATGACGACATC Smed_5534 499451 - 499828 + | hypothetical protein Smed_5535 500940 - 499990 - | enoyl-CoA hydratase/isomerase Smed_5536 501476 - 501006 - | endoribonuclease L-PSP Smed_5537 502195 - 501470 - | short-chain dehydrogenase/reductase SDR Smed_5538 502456 - 503550 + | 2-nitropropane dioxygenase NPD Smed_5539 503715 - 504923 + | hypothetical protein Smed_5540 505600 - 504920 - | response regulator receiver protein Smed_5541 505785 - 505612 - | hypothetical protein Smed_5542 505923 - 506597 + | ThiJ/PfpI domain-containing protein Smed_5543 506613 - 507074 + | hypothetical protein Smed_5544 507217 - 507582 + | hypothetical protein Smed_5546 509315 - 508275 - | alpha/beta hydrolase fold Smed_5547 511541 - 510018 - | aldehyde dehydrogenase TERM 307 513616 - 513585 - R 70 -3.6 -4.63218 | gap 1, opp_overlap 513596, overlap 513587 GCTCGCTGAAGAAAA TCGGCATCCGTCCGC TTG GCGGT-GGATTCCCA ACTGATGGCTTCGGC Smed_5549 514091 - 513870 - | hypothetical protein TERM 308 513923 - 513896 - G 72 -12 -3.34895 | GTGAGCCCGAACGAA GGCCGCCTCC GGGCGGGT GGAGACGGCC TTCAGCGGACCGGGA Smed_5550 516499 - 514088 - | PAS/PAC sensor signal transduction histidine kinase Smed_5551 517824 - 516499 - | hypothetical protein Smed_5552 518354 - 518010 - | hypothetical protein TERM 309 518234 - 518268 + g 71 -13 -2.98823 | gap 2, opp_overlap 518206, overlap 518236 CGGCCATCCGGTGAC GAGGGCGCTC--CGTC ATGAC GACGTCGAGCGCCCTC TGTGTGTCCAACGAC Smed_5553 518782 - 518573 - | hypothetical protein Smed_5554 520017 - 519007 - | periplasmic binding protein/LacI transcriptional regulator Smed_5555 520226 - 522154 + | extracellular solute-binding protein Smed_5556 522258 - 524372 + | hypothetical protein Smed_5557 524400 - 525386 + | binding-protein-dependent transport systems inner membrane component Smed_5558 525396 - 526571 + | binding-protein-dependent transport systems inner membrane component Smed_5559 526584 - 528296 + | ABC transporter related Smed_5560 528309 - 529094 + | hydroxypyruvate isomerase Smed_5561 529098 - 529949 + | 2-hydroxy-3-oxopropionate reductase TERM 310 530282 - 530262 - g 70 -12.5 -2.87211 | ATCCGGTCCCAGACA GGGCCGGCT TGG AGGCGGCCC AGCGGCTGAAAGCCA Smed_5562 530036 - 531250 + | hydroxypyruvate reductase Smed_5563 531458 - 531769 + | hypothetical protein Smed_5564 532513 - 532088 - | hypothetical protein Smed_5565 533013 - 532606 - | OsmC family protein Smed_5566 533634 - 533035 - | short-chain dehydrogenase/reductase SDR TERM 311 533899 - 533883 - H 74 -8 -4.15565 | opp_overlap 533883 GGTAGCAGGCGAAAA CGAGAG TGAGC CTCTCG TTCTCGATCAGGGAC Smed_5567 534316 - 534537 + | hypothetical protein Smed_5569 535598 - 534681 - | LysR family transcriptional regulator Smed_5570 535882 - 536835 + | putative transmembrane protein Smed_5571 538455 - 537229 - | OsmC family protein TERM 312 537966 - 537991 + g 83 -12.5 -3.83568 | opp_overlap 537958 CGAGAAACGTGCGCC CGGCGAGATCG ACGT CGGCCTCGCCG TTCTTCTCGATCTCG TERM 313 538289 - 538265 - G 72 -4.1 -4.54727 | CCCGTGAAATCAAAA CGCAGGACAGC GAT GCCTTCACGCG CAAGCTCCACTGCAA TERM 314 538369 - 538356 - G 91 -9.5 -4.62872 | AGCAATGGGCAAAAA GCGCG TAGG CGCGC AAAGGCCCATTTGGC Smed_5572 539163 - 538657 - | methionine sulfoxide reductase A Smed_5573 539607 - 539164 - | methionine sulfoxide reductase B Smed_5574 540591 - 539716 - | LysR family transcriptional regulator Smed_5576 542774 - 541185 - | histidine kinase Smed_5577 544368 - 542866 - | non-specific serine/threonine protein kinase Smed_5578 545289 - 544852 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 315 546038 - 546057 + G 76 -9.3 -4.08767 | opp_overlap 546024 AGCGCTGCCGCCCGG CCATCGC AACGTA GCGATGG TTTTCCAGAACTACG Smed_5579 545820 - 546905 + | ABC transporter related TERM 316 546956 - 546920 - T 83 -14.6 -3.02263 | gap 1 ATACGCGTCCCAATA GCAGCGGACCTCCAATC ATCT AATCGGAGGTCCG-TGC AACGGCCAGCGGGAG Smed_5580 547823 - 546981 - | binding-protein-dependent transport systems inner membrane component Smed_5581 548707 - 547820 - | binding-protein-dependent transport systems inner membrane component TERM 317 548211 - 548195 - G 73 -6.5 -4.32048 | opp_overlap 548195 CAACAATATGGAAAA TCCGGCG GTC CACCAGA TTGTGATCATACCCA Smed_5582 550051 - 548777 - | extracellular solute-binding protein Smed_5583 551607 - 550099 - | Alpha-N-arabinofuranosidase Smed_5584 552632 - 551709 - | transcriptional regulator, TrmB Smed_5585 552872 - 552723 - | hypothetical protein TERM 318 552837 - 552821 - G 70 -12.3 -3.13522 | overlap 552819 AGCCTCCGAGCAAGA CGTCTCG ACG CGAGACG TTCAAAGGGTGGTCG Smed_5588 554929 - 554537 - | short-chain dehydrogenase family protein Smed_5589 556268 - 554943 - | FAD dependent oxidoreductase TERM 319 555141 - 555109 - G 71 -9 -3.78775 | gap 1, opp_overlap 555136 GCGGCGAGGATGAAA CCCGGTACGGCGGCG ATTT CGCCGATGC-CCGGG ACCCCGTCCGGCGTG TERM 320 555625 - 555643 + g 71 -5.8 -4.26076 | opp_overlap 555609 555612 GAGGAGGCCCAGGCG CCGCCGGC AAG GACGGCCG TTTTCGTGCGGATGG Smed_5590 556504 - 556980 + | AsnC family transcriptional regulator Smed_5591 558744 - 557089 - | ABC transporter related TERM 321 558366 - 558339 - G 73 -8.5 -4.10007 | gap 2, overlap 558340 ACAACGCCCGGAAAA GCTCGACGGCGCG TGCG CGCGCC-TCGA-C GACCGGCATGAGTCC Smed_5592 559607 - 558744 - | binding-protein-dependent transport systems inner membrane component TERM 322 558853 - 558836 - G 73 -3.3 -4.7078 | opp_overlap 558843, overlap 558837 558839 CGAAGGACGGAAAAA TCACCGC CGGT GCGCCGA AGGGAAGGGCGCCGA Smed_5593 560554 - 559604 - | binding-protein-dependent transport systems inner membrane component Smed_5594 562251 - 560644 - | extracellular solute-binding protein TERM 323 561935 - 561945 + g 71 -8.2 -3.85817 | overlap 561933 GCCAGTTCCATCTGC GGCG TGC CGCC TTTATCGAGGAAGGT TERM 324 562274 - 562288 + r 80 -9.2 -4.17089 | overlap 562283 CCCTTTTCGTTTTGT GGCGGG CTG CCCGTC TTTTGCGGGTTTGGA Smed_5595 563035 - 562322 - | HAD family hydrolase TERM 325 562504 - 562526 + g 76 -9.9 -3.89336 | CGTGATACTGGCTCT GGGCGACAT GCAGA ATGTCGTCC TTTGAATTTCCTTCC TERM 326 563135 - 563152 + r 75 -4.1 -4.77157 | gap 1, overlap 563128 CGCTCTTGGTGAAAA GGCCC-CA ATT TGCGGGTC TTTTTCCTCGATTCG Smed_5596 564646 - 563270 - | hypothetical protein Smed_5597 565497 - 564661 - | GCN5-related N-acetyltransferase Smed_5598 565813 - 566481 + | haloacid dehalogenase, type II TERM 327 566550 - 566527 - g 90 -19.6 -2.79183 | opp_overlap 566533 566534, overlap 566529 CCTACTGGCACGACA CAGCCCCGGC CTTC GCCGGGGCTG TGCAGGGTCCGGTCG TERM 328 566548 - 566529 - g 83 -16.4 -2.94416 | opp_overlap 566533 566534, overlap 566527 TACTGGCACGACACA GCCCCGGC CTTC GCCGGGGC TGTGCAGGGTCCGGT TERM 329 566961 - 566995 + G 76 -8.5 -4.15222 | gap 1, opp_overlap 566985 566986 GATACGGCGCTACTT GGCGCAGTCGACCTGC AGCA GGAAGTCGGC-GCGCC TTTCTTCGGCGGAAT Smed_5599 566499 - 567773 + | FAD dependent oxidoreductase TERM 330 567819 - 567794 - T 71 -12.6 -2.66274 | gap 1, opp_overlap 567794, overlap 567793 567809 GCGGCTATAATGAAG GGCGCGG-ACC GGAAA GGTGCCGCGCC TTTTTTGCTTGGAGT TERM 331 567794 - 567819 + T 100 -12.6 -5.27477 | gap 1, opp_overlap 567793 567794 567809 GCGGCTATAATGAAG GGCGCGG-ACC GGAAA GGTGCCGCGCC TTTTTTGCTTGGAGT TERM 332 568041 - 568019 - T 88 -16.4 -3.10464 | overlap 568011 CGATCAAGTTTAAGA TCTTGGGTCG ATC CGACCCAAGA CCCTCGCGACCCTAG Smed_5600 569507 - 568053 - | succinic semialdehyde dehydrogenase TERM 333 569265 - 569305 + g 80 -4.6 -4.89477 | overlap 569290 GTTTTCGATCATCAG CGCGTGCC-AGCGCTCGAGC AGG GCG-GCGCGTTCGGCGTGCG TTTTCTTCTTCCAGG Smed_5601 570585 - 569542 - | 3-isopropylmalate dehydrogenase TERM 334 569632 - 569661 + g 74 -2.7 -4.83615 | gap 1, overlap 569621 569636 GATGGTCGCTCTTTC GAGCGCGGCTATGA TCA TCCCCGCCGC-CTC TTTTTCTCCGAGATG Smed_5602 572058 - 570595 - | aldehyde dehydrogenase TERM 335 571255 - 571268 + g 72 -2.3 -4.73388 | opp_overlap 571255 ATCGGCATCGGAGAA GACCA GTTG TGGGC TTTTTCCTCCGAGTT Smed_5603 572781 - 572428 - | protein of unknown function DUF861 cupin_3 Smed_5604 573792 - 572869 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Smed_5605 574928 - 573804 - | acetylornithine deacetylase TERM 336 575984 - 575974 - g 75 -3.2 -4.86731 | CGCCGCCAAAGAAAA CCAG TTT CTGA GGCTCGACACCCCGA Smed_5606 575258 - 576148 + | GCN5-related N-acetyltransferase TERM 337 577260 - 577237 - g 70 -10.2 -3.63627 | opp_overlap 577237 TGCTCACACGCGAAA TCCCGGCGCG AGAG CGAACCGGGA TGTTCGCGCGTTACA Smed_5608 576858 - 578051 + | major facilitator transporter Smed_5609 578792 - 578073 - | high-affinity nickel-transporter Smed_5610 579232 - 578798 - | SNARE associated Golgi protein Smed_5611 580551 - 579229 - | major facilitator transporter Smed_5612 580839 - 580564 - | hypothetical protein Smed_5613 580922 - 581305 + | hypothetical protein TERM 338 581936 - 581953 + G 85 -9.9 -4.26076 | overlap 581941 TCGAGATCGGCCAGC TCATCGC TCTC GCGATGA TTTTGATCGCGATGA Smed_5614 581353 - 582084 + | putative ORF1 (plasmid pTOM9) Smed_5615 582109 - 582762 + | putative (L31491) ORF2; putative (plasmid pTOM9) TERM 339 582812 - 582776 - f 76 -12.2 -3.42354 | opp_overlap 582779 582781, overlap 582778 582779 582781 GACCCGAACCGACAA CAGCAGCCGCTGGCGG CCATC CCGTCAGCGGCTGTTC AGTCGCGTCCAAGCA TERM 340 582810 - 582778 - f 86 -14.8 -3.281 | opp_overlap 582779 582781, overlap 582776 582779 582781 CCCGAACCGACAACA GCAGCCGCTGGCGG CCATC CCGTCAGCGGCTGT TCAGTCGCGTCCAAG TERM 341 582809 - 582779 - f 95 -18.3 -2.56539 | opp_overlap 582779 582781, overlap 582778 582776 582781 CCGAACCGACAACAG CAGCCGCTGGCGG CCATC CCGTCAGCGGCTG TTCAGTCGCGTCCAA TERM 342 582779 - 582809 + F 100 -20.5 -3.06796 | opp_overlap 582779 582778 582776 582781, overlap 582781 CCGAACCGACAACAG CAGCCGCTGGCGG CCATC CCGTCAGCGGCTG TTCAGTCGCGTCCAA TERM 343 582807 - 582781 - f 83 -15.1 -2.8176 | opp_overlap 582779 582781, overlap 582779 582778 582776 GAACCGACAACAGCA GCCGCTGGCGG CCATC CCGTCAGCGGC TGTTCAGTCGCGTCC TERM 344 582781 - 582807 + F 91 -17.3 -3.09327 | opp_overlap 582781 582779 582778 582776, overlap 582779 GAACCGACAACAGCA GCCGCTGGCGG CCATC CCGTCAGCGGC TGTTCAGTCGCGTCC Smed_5616 583130 - 584068 + | hypothetical protein Smed_5617 584780 - 584082 - | GntR family transcriptional regulator TERM 345 585642 - 585620 - H 100 -7.8 -5.40072 | TTTCGCTCAAAAAAA TACAATCTTG ACG CCAGATTGTA TACATGAGACAGTCA TERM 346 585781 - 585813 + G 74 -11.9 -3.48276 | CATTCGGCGCCGTGG GATTGGTCATGGCGC AGG GCGCCTTGTCCAAGC TTGTATACGCGCAAG Smed_5619 585732 - 587312 + | extracellular solute-binding protein TERM 347 587742 - 587712 - g 100 -16.9 -3.85698 | opp_overlap 587712 587713, overlap 587713 CTTTGGCCCTACAAA TTGCCAGACCGCG TTTCC CGCGGTCTGGCAC TTCTCGGCGCGTCGA TERM 348 587712 - 587742 + G 91 -16.9 -3.29511 | opp_overlap 587712 587713, overlap 587713 CTTTGGCCCTACAAA TTGCCAGACCGCG TTTCC CGCGGTCTGGCAC TTCTCGGCGCGTCGA TERM 349 587713 - 587741 + G 91 -20.4 -2.57564 | opp_overlap 587713 587712, overlap 587712 TTTGGCCCTACAAAT TGCCAGACCGCG TTTCC CGCGGTCTGGCA CTTCTCGGCGCGTCG TERM 350 587741 - 587713 - g 93 -20.4 -2.91276 | opp_overlap 587712 587713, overlap 587712 TTTGGCCCTACAAAT TGCCAGACCGCG TTTCC CGCGGTCTGGCA CTTCTCGGCGCGTCG TERM 351 587753 - 587764 + G 71 -5.8 -4.3255 | overlap 587746 GGCACTTCTCGGCGC GTCG ACAC CGAC TTTCTTCGTTGGCGC Smed_5620 587325 - 588260 + | binding-protein-dependent transport systems inner membrane component TERM 352 588792 - 588808 + G 71 -13.7 -2.56391 | overlap 588791 588790 588789 CGTTGCGCGTACTGG GCGCCAG CCC CTGGCGC ATCTATTTCAATCAT Smed_5621 588263 - 589162 + | binding-protein-dependent transport systems inner membrane component Smed_5622 589152 - 590147 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 353 590639 - 590657 + G 74 -11.7 -3.46602 | GCCATTGCCAGATCT CTCGCGG TGAAC CCGCGAG TTCTGATCTGCGACG Smed_5623 590144 - 591151 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 354 591203 - 591225 + F 100 -12 -4.63932 | ATCTTCCCGCCAACT TGCCCGGTAT GGC AAACCGGGCA TTTTCTTCAGCGATG Smed_5624 592144 - 593433 + | integrase catalytic region TERM 355 594204 - 594167 - g 100 -29.3 -4.07568 | opp_overlap 594168 594169, overlap 594192 TCGGCTTCGCGAAAA GCGCCGCTCCGGCCTTC TGCA GAAAGCCGGAGCGGCGC TCCAACCCAACGAAA TERM 356 594210 - 594192 - g 71 -8.8 -3.85698 | overlap 594167 GGCCTTCTGCAGAAA GCCGGAGC GGC GCTCCAAC CCAACGAAACCGCAA Smed_5625 593433 - 594233 + | IstB ATP binding domain-containing protein Smed_5626 595142 - 594336 - | hypothetical protein Smed_5627 595404 - 595192 - | hypothetical protein Smed_5629 597409 - 596672 - | hypothetical protein TERM 357 597023 - 597037 + g 72 -4.2 -4.57569 | ATGACGTTGATCGGC GCTGTT CCC AACCGC TTTTTCGAAGGCTAG Smed_5630 598133 - 597783 - | hypothetical protein Smed_5631 598350 - 598595 + | hypothetical protein TERM 358 598581 - 598603 + T 78 -11.3 -3.72324 | GCGGTCCCGTTTCGG GATCGGCGT CAATA GCGCCGATC TTATTGCTCGACCTG Smed_5632 599121 - 598699 - | response regulator receiver protein Smed_5633 599816 - 599160 - | response regulator receiver protein Smed_5634 601697 - 599823 - | integral membrane sensor signal transduction histidine kinase TERM 359 599879 - 599861 - G 75 -4.5 -4.7629 | gap 1, opp_overlap 599862, overlap 599863 GGACGAAGCGAAAAA CAGCGCCG CCTT CAGCGC-G ATTGTCTGCCCATAT TERM 360 599878 - 599863 - G 73 -8.2 -3.99461 | opp_overlap 599862, overlap 599861 ACGAAGCGAAAAACA GCGCCG CCTT CAGCGC GATTGTCTGCCCATA TERM 361 600164 - 600194 + g 76 -8.2 -4.13767 | gap 1, overlap 600162 GGAGATGCACCTTGT CGGCCCGCACCGG CAGCTT CCGG-GCCGGCTG TTTTGAACTGACCAC TERM 362 604435 - 604445 + H 71 -8.2 -4.03167 | CATAGATCGTCACAC CGCC ATC GGCG TTCTTCTTCATGTTG TERM 363 606376 - 606388 + H 74 -7.7 -4.19735 | ATAAGGCAACGACGA GGTGA CTG TCACC TTTACTTTTAGGCAC Smed_5641 606459 - 607856 + | hypothetical protein Smed_5642 607955 - 609262 + | hypothetical protein Smed_5643 609658 - 609524 - | hypothetical protein TERM 364 609631 - 609657 + g 71 -9.3 -3.76393 | opp_overlap 609633, overlap 609632 AAGGCGCATAAATGA AACCCTGGCCG TCTCC CGGCCAGGGCA TTTCGATTGAAATAT TERM 365 609632 - 609656 + g 70 -12.8 -2.85354 | opp_overlap 609633, overlap 609631 AGGCGCATAAATGAA ACCCTGGCCG TCTCC CGGCCAGGGC ATTTCGATTGAAATA TERM 366 609655 - 609633 - G 100 -16.3 -4.13995 | opp_overlap 609632 609631 GGCGCATAAATGAAA CCCTGGCCG TCTCC CGGCCAGGG CATTTCGATTGAAAT TERM 367 611269 - 611289 + G 72 -4 -4.56775 | CCGTCTCAAATGGGT GGAAGC GGTCGCTGA GCTTCC TTTTTAGCGCCAGCT Smed_5646 610988 - 611296 + | hypothetical protein Smed_5647 612658 - 611579 - | MscS mechanosensitive ion channel TERM 368 612315 - 612295 - G 83 -4.7 -5.01811 | overlap 612297 612312 CGATCAAACGAAAAA TACGTTTCA GGT TGAAACGCG AGACACGATTGGGAA TERM 369 612313 - 612297 - G 79 -9.5 -4.12375 | overlap 612295 612312 ATCAAACGAAAAATA CGTTTCA GGT TGAAACG CGAGACACGATTGGG Smed_5648 614369 - 613068 - | putative nitrilotriacetate monooxygenase component A Smed_5649 615035 - 614385 - | hypothetical protein TERM 370 614686 - 614662 - G 72 -4.1 -4.56597 | overlap 614663 614664 TCCGCGGGGTAAAAA TCGCTGTCGAC CAC GTCGACGCCGG GGCTTGCCTTCAGGC Smed_5650 616303 - 615053 - | monooxygenase FAD-binding TERM 371 615136 - 615155 + g 71 -5.6 -4.33105 | opp_overlap 615124 615123, overlap 615137 AACGCACGGCCTCGT AGCCGTGC TCGC GCATGGCC TTTTCGTAGTCGTTC TERM 372 615513 - 615536 + g 73 -11.1 -3.65046 | GTGTCGTAGGCCGTG TTCCACCAG GTGTAG CTGGTGGAA TTGTTGAAGTGGAAG TERM 373 615974 - 615946 - G 73 -6.7 -4.37886 | gap 1, overlap 615947 CGAGCCCGGACAAAA GGATCTGCCGCA GCGTGA TGCGGCTGA-CC GACTTCTCGATATGG Smed_5651 617178 - 616300 - | NmrA family protein Smed_5652 618209 - 617175 - | hypothetical protein TERM 374 617864 - 617882 + g 71 -5.8 -4.323 | overlap 617859 617858 AATTGGGCTTGCGCG GCACGCCG ATG CGGCGCCC TTTTAAGTCTTTCGC TERM 375 618086 - 618120 + g 75 -3.5 -4.82901 | overlap 618088 GATCCTTGCTGTCGC GGATC-GAGCGCACGGC AAC GCCG-GCGTTCAGAAAC TTTTTGTCGAGCCAG Smed_5653 619452 - 618220 - | acyl-CoA dehydrogenase type 2 Smed_5654 620506 - 619466 - | hypothetical protein TERM 376 619935 - 619956 + g 100 -17.3 -3.53811 | opp_overlap 619924 TAGATTGCGTCGACC TCGCCGCGC AGCA GCGCGGCGA TTTCGGGGCCATAGG TERM 377 621320 - 621302 - g 70 -11.7 -3.14132 | opp_overlap 621309 GCTCTTTTCGATCAA GCTCGGC TGGCT GCCGAGC GGCGGCGCGGGCACC Smed_5655 620805 - 621791 + | binding-protein-dependent transport systems inner membrane component Smed_5656 621791 - 622789 + | binding-protein-dependent transport systems inner membrane component Smed_5657 622792 - 623793 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Smed_5658 623771 - 624715 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 378 625305 - 625272 - g 74 -14.5 -2.52623 | overlap 625271 625269 GCCGCTCTATAACAT CGTCAACCGCACCGC CGAA GCGGAGCAGTTGCCG GCAGCTGCCGCCTAT Smed_5659 624730 - 625791 + | aldo/keto reductase TERM 379 625837 - 625867 + F 95 -14 -4.07885 | opp_overlap 625841, overlap 625841 625861 GCAAATCGAATTGCA AAAAGCCCCGGATC GTT GATCCGGGGCTTCG TTTTACCGGGGCCTA TERM 380 625863 - 625841 - f 100 -19.2 -4.67234 | opp_overlap 625841 625837 625861 ATCGAATTGCAAAAA GCCCCGGATC GTT GATCCGGGGC TTCGTTTTACCGGGG TERM 381 625841 - 625863 + F 100 -19.2 -3.66908 | opp_overlap 625841, overlap 625837 625861 ATCGAATTGCAAAAA GCCCCGGATC GTT GATCCGGGGC TTCGTTTTACCGGGG TERM 382 626091 - 626066 - f 78 -8.9 -4.20516 | TCCGCACCGAAGAAA CCGGTCAGCGT TCGG ACGATGTCCGG ATCATGCCCCATCGT TERM 383 628283 - 628293 + G 93 -8.2 -5.01811 | overlap 628280 628282 GTACTTTGAAGCCGA CGCG CCG CGCG TTTTTGCTTTCCTCC Smed_5662 628249 - 629883 + | extracellular solute-binding protein TERM 384 630611 - 630627 + G 72 -12.3 -3.34398 | overlap 630610 AAGCGGCAGTGTAAT CCTCGAC AAT GTCGAGG TATTTCCGCACGAAC Smed_5663 629982 - 631205 + | acyl-CoA dehydrogenase type 2 TERM 385 631913 - 631931 + G 86 -5.2 -5.24129 | ACTTCCCGCGTACAT GCGGCTGG GTG TCAGTTGC TTTTTTGTGACCGGC Smed_5664 631746 - 632225 + | Ion transport 2 domain-containing protein Smed_5665 632333 - 633421 + | hypothetical protein Smed_5667 635455 - 634427 - | putative transmembrane protein Smed_5668 636548 - 635445 - | secretion protein HlyD family protein TERM 386 636498 - 636525 + g 73 -11.2 -3.65199 | opp_overlap 636477 636496, overlap 636499 CCTGCGCAACGGATT GCGACCGGCAGC GACA GCTGCGGGTCGG TTTGAATGCGGGGTT TERM 387 636499 - 636524 + g 75 -14.7 -2.78798 | opp_overlap 636477 636496, overlap 636498 CTGCGCAACGGATTG CGACCGGCAGC GACA GCTGCGGGTCG GTTTGAATGCGGGGT Smed_5669 637035 - 636712 - | hypothetical protein TERM 388 636796 - 636822 + g 81 -2.2 -5.14965 | CGCGAGCGCTCTGGA GCTTGCTTCG GATGTGA CGAGGTTAGC TTTTTTAATGAGGAT TERM 389 637066 - 637038 - H 78 -8.8 -4.10161 | gap 1, opp_overlap 637041, overlap 637040 637041 637043 CAGCACTTCTCAAAA TAGGACCGCCGAC CGTC GCCGGCGG-CCTT GTGACTCAGCTGCAG TERM 390 637064 - 637040 - H 78 -11.4 -3.64716 | gap 1, opp_overlap 637041, overlap 637038 637041 637043 GCACTTCTCAAAATA GGACCGCCGAC CGTC GCCGGCGG-CC TTGTGACTCAGCTGC TERM 391 637064 - 637041 - H 76 -13.8 -2.78508 | opp_overlap 637041, overlap 637040 637038 637043 CACTTCTCAAAATAG GACCGCCGAC CGTC GCCGGCGGCC TTGTGACTCAGCTGC TERM 392 637062 - 637043 - H 74 -12.8 -2.93623 | opp_overlap 637041, overlap 637040 637041 637038 CTTCTCAAAATAGGA CCGCCGAC CGTC GCCGGCGG CCTTGTGACTCAGCT Smed_5670 637129 - 637572 + | plasmid stability protein-like protein Smed_5671 637686 - 637895 + | putative plasmid stability protein Smed_5672 640195 - 638138 - | diguanylate cyclase/phosphodiesterase TERM 393 640596 - 640570 - H 85 -10.2 -4.39166 | overlap 640586 GCTCAGAGAGGAAAA GATCTGCTGGAT AGG ATCCGGCAAATC GCCGACAGGAACCGC TERM 394 641501 - 641462 - g 73 -2.9 -4.68846 | opp_overlap 641494 ACGAAGAAATCAAAA TTCTGAGGATCCAGCTC GCCCAA AAGCTTCATCTTCAGAA CGTTCAGCTTAAGAA Smed_5674 640930 - 641544 + | hypothetical protein TERM 395 642007 - 641995 - g 78 -4.8 -4.72497 | overlap 641998 642005 TACCGAGCAAGAAAA GAGC GAGAA GCTC AAGCAGATCGAGACA TERM 396 642148 - 642127 - g 79 -8.7 -4.25104 | gap 1 GCCTGGCGAGCAAAA GGGCACCAAG GAC CCTGG-GCCC CTCCCGGCCGGCGAT Smed_5675 641822 - 642277 + | transposase IS3/IS911 family protein Smed_5676 642526 - 643116 + | hypothetical protein Smed_5677 644069 - 644308 + | hypothetical protein Smed_5678 644804 - 645076 + | XRE family transcriptional regulator TERM 397 645940 - 645967 + G 74 -9.8 -3.73509 | TCCATCCTGATCGGT GCGGCGGGATCT GCGA AGATCGCGCCAC TTTACGATTTAATGT Smed_5679 645196 - 646284 + | HipA domain-containing protein TERM 398 646581 - 646561 - f 71 -11.1 -3.21099 | GGCGTCGATGACGAA GGCGAGACG GAT CACCTCGCC ATTCCAGCAGGCAAA TERM 399 646656 - 646684 + F 71 -8.1 -4.07885 | opp_overlap 646638, overlap 646661 TGACCTTGCCGTCAT GGATGCGACCCTT GCG AAGGGCCGTATGC TTTTCCAGCAGCATG TERM 400 647481 - 647465 - f 78 -6.5 -4.59853 | overlap 647468 TGAATCGCGGAAAAA TCATCCG CGG CGGCTGA TAAATCGGCCCCTCG TERM 401 648274 - 648293 + G 74 -13.6 -2.87132 | opp_overlap 648258 648255, overlap 648277 648281 648285 GAGGCGATCGACGCC GCCGATGC CGCT GCATCGGC TGTCTCAGCCGGCGC TERM 402 648281 - 648313 + G 75 -11.9 -3.56704 | opp_overlap 648255, overlap 648274 648277 648285 TCGACGCCGCCGATG CCGCTGCATCGGCTG TCT CAGCCGGCGCATTGG TTGCTTTCCTCGCCC TERM 403 648285 - 648309 + G 74 -12.1 -3.51202 | opp_overlap 648255, overlap 648274 648281 648277 CGCCGCCGATGCCGC TGCATCGGCTG TCT CAGCCGGCGCA TTGGTTGCTTTCCTC Smed_5683 647512 - 648426 + | hypothetical protein Smed_5684 648806 - 649966 + | glycosyl transferase group 1 Smed_5685 650041 - 652392 + | UDP-galactopyranose mutase TERM 404 653386 - 653368 - g 72 -8 -4.11484 | overlap 653371 CGGAACGGGCGAAAA CGATCGGC CGG GCCGGCCG GGCCAGGTTCGACAC Smed_5686 652389 - 655631 + | glycosyl transferase group 1 TERM 405 656418 - 656432 + G 73 -6.4 -4.36262 | ATATTCACGCGCTTC TGTCGG CTT TCGACA TTTTCATCTGGCTGT TERM 406 657078 - 657090 + G 71 -5.5 -4.39002 | CCGACGACATTGACA TCTGG TCT CCGGA TTTTGTGACACGTTT Smed_5687 655628 - 657925 + | glycosyl transferase group 1 Smed_5689 660005 - 658125 - | hypothetical protein TERM 407 658280 - 658301 + g 88 -3.7 -5.36441 | opp_overlap 658270 ACAATCGCGCCTTGT TGGACGG CACGGGAT CTGTCCA TTTTTTATGTCCGGC TERM 408 659693 - 659741 + g 81 -15.4 -3.03701 | gap 2, overlap 659688 CGAGACCGATCGGCC TCG-AGTTCGGCCCCGTG-CAGAC CCC GTCCGGCATGGGGCCGAACACCGA TCTGGTTTCGTCGCC TERM 409 659857 - 659867 + g 76 -8.2 -4.18197 | ACGGTTCGGTTACCG GCCG TTG CGGC TTTTGGGTCGGGGAT Smed_5690 660620 - 660039 - | hypothetical protein TERM 410 661587 - 661570 - g 70 -9.9 -3.64984 | overlap 661568 ACATTGGCGAAAAGA CGCTGAA GGGC TTCAGCG ATCCCGTCCACGTCC TERM 411 662176 - 662195 + G 72 -7.2 -4.21908 | gap 1 AGCTCCTCCAGACGC TTGCGC-AC GAC GTCGCGCAA TTTTCAGTGCTCCTC Smed_5691 660858 - 664025 + | sterile alpha motif-containing protein Smed_5692 665976 - 664477 - | hypothetical protein TERM 412 664525 - 664571 + g 86 -8.7 -4.5442 | gap 1, opp_overlap 664518 664532, overlap 664530 GCTGAAAAGTCGGCG CTCAAGACGCGCGCCCCCGTCG ACCT TGACGAGCGCGTGGGTCTT-AG TTTTGTGGTTGCGCA TERM 413 664530 - 664567 + g 71 -9.7 -3.78909 | opp_overlap 664518 664532, overlap 664525 AAAGTCGGCGCTCAA GACGCGCGCCCCCGTCG ACCT TGACGAGCGCGTGGGTC TTAGTTTTGTGGTTG Smed_5693 667062 - 666565 - | hypothetical protein Smed_5694 667565 - 667218 - | hypothetical protein TERM 414 668082 - 668109 + G 72 -2.1 -4.7254 | gap 3, opp_overlap 668064, overlap 668087 TGCCGGCGCCGGCCT TCCGAAGGCTGGTC ACC GACCA-CC--CGGA TTTTTCCTGGGCCCT Smed_5695 667766 - 668467 + | cyclic nucleotide-binding protein TERM 415 670068 - 670090 + T 85 -11.2 -4.0274 | TTGAACATTGATTCA GCCCAGGTCG CAA CGATCCGGGC TTCTTTCGTCCTAAA Smed_5697 672825 - 672163 - | TetR family transcriptional regulator Smed_5698 673008 - 673907 + | shikimate 5-dehydrogenase Smed_5699 673897 - 674052 + | hypothetical protein Smed_5700 674931 - 674188 - | GntR family transcriptional regulator Smed_5701 675073 - 676059 + | TRAP dicarboxylate transporter- DctP subunit TERM 416 676609 - 676627 + G 71 -5.8 -4.26076 | CTATACAGGCTATCC GCGGCAGG GCG CCCGACGC TTTTGATCCCACTAA Smed_5702 676143 - 676661 + | tripartite ATP-independent periplasmic transporter DctQ Smed_5703 676658 - 677959 + | TRAP dicarboxylate transporter, DctM subunit Smed_5704 677971 - 678411 + | 3-dehydroquinate dehydratase Smed_5705 680781 - 681185 + | hypothetical protein Smed_5706 682029 - 681388 - | lysine exporter protein LysE/YggA TERM 417 682103 - 682076 - R 72 -9.8 -3.6715 | CGAGCGAACCGCAAA CCGACAAGCCGC AGAT GCAGCCTGTCCG AATCGACGATATCTA TERM 418 682573 - 682559 - R 75 -8.6 -4.07568 | opp_overlap 682559 TGCGGCTTTCTAAAA TTCCTC TCA GAGGAA TTCCTGGATGAAGGT Smed_5708 682900 - 682565 - | cupin 2 domain-containing protein TERM 419 682680 - 682695 + g 71 -6.1 -4.36914 | opp_overlap 682677 GCCACGATAATATCG CCAGG CAAAGC CCTGG TTTTCTCGCCGCCCA TERM 420 683415 - 683398 - g 74 -9.1 -3.87075 | gap 1, opp_overlap 683409, overlap 683399 ATCAGGCGCGAGAAA GCGCCGCG CGA CG-GGCGC AGCGTGCACGTTGTA Smed_5709 683053 - 683583 + | MarR family transcriptional regulator Smed_5710 684518 - 683640 - | NmrA family protein Smed_5711 684901 - 684593 - | hypothetical protein TERM 421 684978 - 684944 - R 71 -7 -4.16284 | opp_overlap 684944, overlap 684945 AGATCCGCGAAGAAA GGCAGCGCCCCCGGTA GAC TAAAAGGAGCGCTGCA GTTGGTCGACTTGTG Smed_5714 687076 - 686147 - | integrase catalytic region Smed_5715 687336 - 687070 - | transposase IS3/IS911 family protein Smed_5716 687866 - 688072 + | hypothetical protein Smed_5717 688537 - 688268 - | hypothetical protein Smed_5718 689000 - 688527 - | hypothetical protein Smed_5719 689424 - 690701 + | epocide hydrolase domain-containing protein TERM 422 691291 - 691281 - T 84 -2.4 -5.45726 | GACAGCCCAAAAAAA GAGG CCC CCAC TACCGTCTAGGGTGA TERM 423 692037 - 692064 + T 88 -11.3 -4.10164 | opp_overlap 692037 GGGTACTGAATATAA TACCGCGCAGC CCTCTA GCTGCGCAGTA TTTATATCGTCATGA TERM 424 692064 - 692037 - T 95 -14.2 -3.68988 | opp_overlap 692037 GGGTACTGAATATAA TACCGCGCAGCC CTCT AGCTGCGCAGTA TTTATATCGTCATGA Smed_5721 693489 - 692074 - | aldehyde dehydrogenase Smed_5722 693598 - 694500 + | LysR family transcriptional regulator Smed_5723 694685 - 695311 + | hypothetical protein TERM 425 695578 - 695559 - T 75 -4.2 -4.82901 | CCGCCGGTACAAAAA GACGCTCT GGGC AGAGGGCC TGACTGCATACCTGC Smed_5724 696083 - 695652 - | methyltransferase type 11 Smed_5726 697693 - 696881 - | beta-lactamase-like protein TERM 426 698385 - 698359 - H 80 -10.1 -4.0371 | gap 1, overlap 698360 TACCGCCGAGAGAAA GCCGG-GCAGGC AGGT GCCTGCGCCGGT ACGACGGGATCAAGG TERM 427 698384 - 698360 - H 79 -13.6 -3.01905 | gap 1, overlap 698359 ACCGCCGAGAGAAAG CCGG-GCAGGC AGGT GCCTGCGCCGG TACGACGGGATCAAG Smed_5729 698757 - 700283 + | transcriptional regulator domain-containing protein Smed_5730 700450 - 700713 + | hypothetical protein Smed_5732 701556 - 701185 - | hypothetical protein TERM 428 701558 - 701520 - G 88 -8 -4.87803 | opp_overlap 701520 GATCGCCAAACAAAA CCCTGCCGAACCGGGAGA CTG TCTCATGACCCGGCACGG TATGATTCGGCCTTC TERM 429 702407 - 702386 - g 74 -12.3 -3.53012 | opp_overlap 702377 TGGCTTTCGGCGAAA GCGGCGATC TGCT GATCGCCAC CGCCATGCTAGCCTG Smed_5733 702157 - 702675 + | GCN5-related N-acetyltransferase TERM 430 702681 - 702669 - T 75 -9.1 -3.99898 | GAAGGAACTCAGAAA GGCGT GAG ACGCC GCCGCGCTTGAGCAA TERM 431 703941 - 703968 + T 100 -15.6 -3.80551 | overlap 703943 TGAGGACGCGAGGTG AAGCCCTGACCG TCTC CGGTCAGGGCTC TTTAATCAATCTTTC TERM 432 703943 - 703966 + T 100 -18.2 -3.47762 | overlap 703941 AGGACGCGAGGTGAA GCCCTGACCG TCTC CGGTCAGGGC TCTTTAATCAATCTT TERM 433 704560 - 704576 + T 95 -15.1 -3.73775 | CGTGGGCGTGGCCTT CGCGCCC GAA GGGCGCG TTTGATGCGGGTGGG TERM 434 704917 - 704887 - T 86 -14.8 -3.23274 | gap 1, overlap 704882 CGTTTGACAATCGAA GCGCCCGCGTTGA GTGGCA TC-ACGCGGGCGC GGGAGAGTGCCGGGA Smed_5738 705777 - 705316 - | hypothetical protein Smed_5739 706515 - 705823 - | hypothetical protein Smed_5740 707437 - 706631 - | hypothetical protein Smed_5741 708279 - 707572 - | helix-turn-helix domain-containing protein TERM 435 707850 - 707794 - G 73 -10.8 -3.56568 | gap 1, opp_overlap 707794 707844, overlap 707785 GAAGGACGCTTCAAA GCGATTGACGAGCGTGGTCCTGTTGGT CCCA ACCAACCGGGCCA-GCTCGCTCAGCGC GGTCTGCTGATTGAT Smed_5742 710130 - 708934 - | signal transduction histidine kinase Smed_5743 711905 - 710355 - | ABC transporter related Smed_5744 712866 - 711895 - | putative ABC transporter, periplasmic solute-binding protein Smed_5745 713847 - 712891 - | monosaccharide-transporting ATPase TERM 436 713403 - 713386 - G 71 -11.3 -3.39895 | GCCCGCACCAACGAA TTCGGCG AAGC CGCCGAA TGGCACCGGAATGCC TERM 437 713782 - 713808 + g 70 -7.4 -4.09685 | gap 1, opp_overlap 713768 GGCCACCGCCGCCAG CATCGC-AAGC ACCGAG GCTTCGCGATG TTTTCCAAGGTCACG Smed_5746 714623 - 713853 - | enoyl-CoA hydratase/isomerase Smed_5747 715782 - 714631 - | putative integral membrane protein TERM 438 714732 - 714749 + g 76 -12.7 -3.53563 | opp_overlap 714724 GGAATGACTCGCGCA GCAGGGC GGAA GCCCTGC TTTGGAACGCGATGT Smed_5748 716978 - 715785 - | Formyl-CoA transferase Smed_5749 717805 - 717011 - | short-chain dehydrogenase/reductase SDR Smed_5750 718983 - 717805 - | hypothetical protein TERM 439 718940 - 718962 + g 93 -13.4 -4.19704 | opp_overlap 718925 GCTCCCGCGTGGGCA GCGATGTCGC GGC GCGACAGCGC TTTTCCATAGAGTTC Smed_5751 719993 - 719079 - | xylose isomerase domain-containing protein Smed_5752 721104 - 720016 - | oxidoreductase domain-containing protein Smed_5753 721399 - 722406 + | regulatory protein LacI TERM 440 722923 - 722904 - T 75 -8.6 -4.07568 | gap 1 GGCGCGTCTTCAAAA CGATGCAGG TAG CCTGC-TCG TCATGCGTCTTGGCC Smed_5755 724145 - 723756 - | response regulator receiver protein Smed_5756 725201 - 724158 - | signal transduction histidine kinase Smed_5757 726653 - 725208 - | putative circadian clock protein, KaiC TERM 441 726740 - 726767 + r 79 -13.4 -3.14344 | opp_overlap 726736 726740 726755 ACAGAGCAGAACGAA GGCGAGGCGCTA AAAT TGGCGGCTCGCC TTGCTAACCCGCCTA TERM 442 726767 - 726740 - R 74 -11.2 -3.49182 | opp_overlap 726740, overlap 726736 726755 ACAGAGCAGAACGAA GGCGAGGCGCTA AAAT TGGCGGCTCGCC TTGCTAACCCGCCTA Smed_5761 728900 - 727764 - | alpha/beta hydrolase fold TERM 443 729002 - 729017 + H 71 -6.8 -4.15453 | overlap 728998 GTTTCCTTTCACCGG CGATCG CGTT CGGTCG TTTTCCGGTACCTTC TERM 444 730738 - 730725 - g 75 -3.8 -4.76644 | AACAGTGATCAAAAA CTCG GGCTGG CGAG TTCAGGGACTGTGAG Smed_5762 730053 - 731315 + | OmpA/MotB domain-containing protein Smed_5763 731312 - 731524 + | hypothetical protein Smed_5764 731652 - 731990 + | glycerol uptake facilitator and related permease (major Intrinsic protein family)-like protein Smed_5766 732908 - 732432 - | transposase IS3/IS911 family protein Smed_5768 733941 - 735608 + | sulfatase Smed_5769 735697 - 736710 + | NapD-like protein TERM 445 738167 - 738179 + G 80 -4.7 -4.8543 | CGCATCATCCCCAAG GCTCC TCC GGCGC TTTTTGTGCCAATTG Smed_5770 737068 - 739362 + | TPR repeat-containing protein TERM 446 739475 - 739491 + F 78 -2.9 -5.1485 | ACATTGTAGCCGGCT TGGGCGA TCA TCTTCCA TTTTTGTATTCCTTG Smed_5771 739839 - 740369 + | hypothetical protein TERM 447 740942 - 740952 + G 73 -8.2 -4.07568 | overlap 740932 GTCTTCGCGATCGCA GCGG TCG CCGC TTTTGCGCACACCGG TERM 448 741788 - 741753 - g 71 -8.2 -3.86897 | overlap 741754 GGGACTCTGCACAAA TCGCCCGCAACATGCG GGTG CGCACACTGCTGCCGA TCCTGCGCAATTTTC Smed_5772 740417 - 742534 + | MscS mechanosensitive ion channel TERM 449 743141 - 743193 + T 76 -4.7 -4.7497 | overlap 743151 CTCTCCCAAGAACGG GTCGGCAATTGCAGCGCTCCAAT TCAATCT GTCGGAGCGCTGCTTTTTCCAGC TTTTTCATAAATCGG TERM 450 743151 - 743183 + T 93 -11.3 -4.67168 | overlap 743141 AACGGGTCGGCAATT GCAGCGCTCCAAT TCAATCT GTCGGAGCGCTGC TTTTTCCAGCTTTTT Smed_5773 743356 - 743198 - | hypothetical protein TERM 451 743573 - 743608 + r 83 -11.9 -3.87373 | gap 1, opp_overlap 743568, overlap 743606 GCGGTGAAATGCCAG CTGCGTCTGCCCGCGA GCATA TGGCGGG-GGACGCAG TTTATGCCAACTGTA Smed_5774 745432 - 743897 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 452 744079 - 744064 - G 73 -6.8 -4.25104 | gap 1, overlap 744065 CGTTTGCGATGAAAA GC-GCCG CAG CGGCTGC AACATGCGGAGCCGC TERM 453 746177 - 746197 + r 100 -13.3 -4.56597 | opp_overlap 746176 746173 TCTCGTCAAGATGAT TCCGGGTCG ATG TGACCCGGA TTTTTGGCGGCGGCC Smed_5775 747222 - 746167 - | CheB methylesterase TERM 454 747275 - 747245 - H 72 -4.7 -4.58395 | gap 1 TCCATCGGTCAAAAA CGCCCGG-CGAA AGGATAAG TTCGACCGCGCG TAAATCTTAGTCGGG TERM 455 747736 - 747713 - g 73 -11 -3.54424 | CGTCATCGCGCCAAA CCGTCGGC TTAAGATT GCCGACGG TACGATAGCCGCGCT TERM 456 748247 - 748262 + G 83 -4.6 -5.01042 | opp_overlap 748233, overlap 748249 TCCAGAGGAAGCTCA GGCGCT GTTC AGCGAC TTTTTGATTTCGGTT Smed_5776 747465 - 750947 + | putative PAS/PAC sensor protein Smed_5777 750931 - 751341 + | response regulator receiver protein Smed_5778 752115 - 751585 - | GCN5-related N-acetyltransferase TERM 457 752065 - 752049 - G 74 -5.1 -4.57569 | overlap 752050 GTATGCGGCGAAAAA CGTCGAT GTC ATCGACT GATAACCGCCTGATT Smed_5779 753623 - 752214 - | hypothetical protein TERM 458 752662 - 752612 - G 71 -13.3 -3.01003 | gap 2, opp_overlap 752628, overlap 752603 752614 GGAACACAGTATACA GACTGGGCACGATCGCTCGCTGGCG GAG CGCC-GC-AGCGATCCTGTCCGGCC GGAAGCTCACGGCGA Smed_5780 754687 - 753620 - | hypothetical protein TERM 459 753881 - 753869 - G 93 -9.1 -4.7629 | CGAGTAACGGAAAAA CGCTC TCA GAGCG GCTACCGTGGTCGCC TERM 460 754816 - 754839 + r 74 -14 -2.63073 | opp_overlap 754819, overlap 754815 754812 754819 TTGGGAGGGCGCAGC CAATCTACCG AATT CGGTAGATTG ATGTTGTTGAGAAGG Smed_5781 755627 - 754896 - | response regulator receiver protein Smed_5782 755768 - 756025 + | hypothetical protein TERM 461 756265 - 756297 + T 72 -9.1 -3.91084 | overlap 756269 GAAGAATGCCAGGTT CAATGCGTGCGCA CACCGCT TGCGCACGCTTCG TTTCATTCGGACTGG TERM 462 756269 - 756293 + T 81 -12.9 -3.61468 | overlap 756265 AATGCCAGGTTCAAT GCGTGCGCA CACCGCT TGCGCACGC TTCGTTTCATTCGGA Smed_5785 757630 - 756905 - | Asp/Glu racemase Smed_5786 758285 - 757659 - | hypothetical protein Smed_5787 758422 - 759099 + | GntR family transcriptional regulator TERM 463 759132 - 759102 - T 78 -11.1 -3.72695 | opp_overlap 759094 759095 759092 AGCCTTGGGATGAAA TGGCGGAGAGCTG GTAAG CGGCTTTCCGCCA CTCCTCATCATTTCG Smed_5788 760126 - 759140 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Smed_5789 761106 - 760123 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 464 760214 - 760179 - G 83 -7.7 -4.57073 | gap 3, overlap 760182 760184 TATGGCCTGCAAAAA CAAGCTCCG-GCTGCTCG CGC CG-GCAGCGCGGA-CCTG CCATGCTGCAGCGCG TERM 465 760212 - 760182 - G 84 -8.3 -4.40561 | overlap 760179 760184 GGCCTGCAAAAACAA GCTCCG-GCTGCTCG CGC CG-GCAGCGCGGACC TGCCATGCTGCAGCG Smed_5790 762592 - 761099 - | N-ethylammeline chlorohydrolase Smed_5791 763785 - 762592 - | cytosine deaminase Smed_5792 764741 - 763791 - | binding-protein-dependent transport systems inner membrane component Smed_5793 765744 - 764776 - | binding-protein-dependent transport systems inner membrane component TERM 466 765754 - 765803 + r 75 -10.2 -3.72695 | gap 3, overlap 765761 765763 CAGCATTGGAATTCC TCGGTCACGGGACGCTCCGGG-GAA TCC TCCTCCCGGAGCGTC--GTGATTGA TTTACTCGGAAAACT TERM 467 765761 - 765798 + r 73 -12.7 -2.73701 | gap 1, overlap 765754 765763 GGAATTCCTCGGTCA CGGGACGCTCCGGG-GAA TCC TCCTCCCGGAGCGTCGTG ATTGATTTACTCGGA TERM 468 765763 - 765796 + r 71 -11.7 -2.91027 | gap 1, overlap 765761 765754 AATTCCTCGGTCACG GGACGCTCCGGG-GAA TCC TCCTCCCGGAGCGTCG TGATTGATTTACTCG TERM 469 765837 - 765817 - R 71 -6.8 -4.11692 | opp_overlap 765817 765816 GATTTACTCGGAAAA CTGCGTCA GCCAG TGACGCGG CTTGTTGTCCGCCAA Smed_5794 767367 - 765805 - | extracellular solute-binding protein TERM 470 766307 - 766327 + g 78 -6.7 -4.56597 | AACGGATATTCCGCA GCGCCTGCC TCG GTCAGGAGC TTTTTCGACAGGGCC TERM 471 766852 - 766867 + g 81 -10.4 -4.16921 | overlap 766863 GCCTTCGATCTTCGC GCCGAC ATCG GTCGGC TTTTCCGAATTGTTG TERM 472 769171 - 769145 - R 100 -17.4 -4.56775 | opp_overlap 769145 769147 ATCCGGCTGTAAAAA GAGCGTCTCACC GGG GGTGAAACGCTC TGATTGCGGGATGGT TERM 473 769145 - 769171 + r 83 -15.2 -2.7185 | opp_overlap 769145, overlap 769147 ATCCGGCTGTAAAAA GAGCGTCTCACC GGG GGTGAAACGCTC TGATTGCGGGATGGT TERM 474 769147 - 769169 + r 71 -12 -2.90392 | opp_overlap 769145, overlap 769145 CCGGCTGTAAAAAGA GCGTCTCACC GGG GGTGAAACGC TCTGATTGCGGGATG Smed_5796 770780 - 769200 - | extracellular solute-binding protein TERM 475 771323 - 771355 + G 75 -3.9 -4.67904 | overlap 771324 CCACCTCGGCCAGCA TCGTCACGTCGATGC CGC GCAGCGACGACCCGG TTTTTGCGATTAATC Smed_5797 770950 - 772425 + | amidohydrolase Smed_5798 772623 - 773378 + | gluconate 5-dehydrogenase Smed_5799 773687 - 773415 - | WGR domain-containing protein Smed_5801 775248 - 774892 - | hypothetical protein Smed_5802 775513 - 775235 - | prevent-host-death family protein Smed_5804 776061 - 776366 + | XRE family transcriptional regulator Smed_5805 776359 - 777600 + | HipA domain-containing protein TERM 476 777638 - 777675 + F 76 -11.9 -3.37533 | opp_overlap 777631, overlap 777639 777641 CAGAGAAATGGCCCC AGGGCTGGACCCAGGGC AACC GCCCTTGCTCCAGCTCG TTGATGATTTTCGCG TERM 477 777639 - 777674 + F 81 -15.4 -2.62038 | opp_overlap 777631, overlap 777638 777641 AGAGAAATGGCCCCA GGGCTGGACCCAGGGC AACC GCCCTTGCTCCAGCTC GTTGATGATTTTCGC TERM 478 777641 - 777672 + F 80 -14.4 -2.84344 | opp_overlap 777631, overlap 777639 777638 AGAAATGGCCCCAGG GCTGGACCCAGGGC AACC GCCCTTGCTCCAGC TCGTTGATGATTTTC Smed_5807 778017 - 778292 + | phage transcriptional regulator, AlpA TERM 479 779536 - 779520 - g 70 -7.9 -4.08216 | opp_overlap 779513 GCAGGCGCTGGAAAA GCCGGTC GGC GAACGGC CCTCCCATGTGTTTA Smed_5810 778768 - 779658 + | short-chain dehydrogenase/reductase SDR TERM 480 779689 - 779742 + T 100 -21.7 -3.20348 | opp_overlap 779729, overlap 779687 779683 ACGAGATCGGTATTG CGGCTCACGCCGCCTGACTTGTACC CGAA GGTGCAATACAGGCGGCGTGCACCG TTGAGTATTGCTAAA Smed_5812 781226 - 780600 - | LysR family transcriptional regulator Smed_5813 781609 - 781418 - | hypothetical protein Smed_5815 783444 - 782698 - | NADP oxidoreductase coenzyme F420-dependent TERM 481 783134 - 783146 + g 77 -4.1 -4.85918 | overlap 783130 TCGACTTTCCCCGCT TCGAT AGC GTCGA TTTTATTGTCTCGTG Smed_5816 784274 - 783540 - | NADP oxidoreductase coenzyme F420-dependent Smed_5817 784745 - 784305 - | MarR family transcriptional regulator Smed_5818 785243 - 785025 - | hypothetical protein TERM 482 786357 - 786317 - H 82 -10.4 -4.11484 | GCCAAGTGCCGAAAA CCTTAGGATGACCGAACG AGGCA CGTTCGGGCATCCTCGAG ACCATTTTACCACGC Smed_5820 786761 - 787714 + | beta-lactamase domain-containing protein Smed_5821 787837 - 788589 + | NmrA family protein TERM 483 788625 - 788591 - f 100 -12.2 -4.7878 | gap 2, overlap 788593 788596 CACTGAGAAAATAAA GAGCACACGGGCCGCC TGCGG GGCGGCC-G-GTGCCC CACTCACGAAAGGAC TERM 484 788625 - 788593 - f 91 -12.6 -3.99938 | overlap 788591 788596 CTGAGAAAATAAAGA GCACACGGGCCGCC TGCGG GGCGGCCGGTGCCC CACTCACGAAAGGAC TERM 485 788622 - 788596 - f 85 -15.1 -3.02791 | overlap 788591 788593 AGAAAATAAAGAGCA CACGGGCCGCC TGCGG GGCGGCCGGTG CCCCACTCACGAAAG Smed_5822 788648 - 789073 + | cupin 2 domain-containing protein TERM 486 789081 - 789109 + F 70 -12.4 -2.80344 | gap 1, overlap 789080 AGAAATAGTCTATCA GGCCGGGCTTGCA GTGC TGCT-GCCCGGCC GTTCTTAGATGCAAC Smed_5823 789144 - 790181 + | MscS mechanosensitive ion channel Smed_5824 791782 - 790577 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Smed_5825 792727 - 791897 - | alpha/beta hydrolase fold Smed_5826 792829 - 793125 + | hypothetical protein Smed_5827 794099 - 793149 - | helix-turn-helix domain-containing protein Smed_5828 795263 - 794514 - | short-chain dehydrogenase/reductase SDR TERM 487 794945 - 794919 - G 78 -3 -5.0538 | opp_overlap 794937 CTGCACGCCAAAAAA CACTCCGC GCGTATTGGTG GCGAAGTG CCTGTCATAGTCTTC Smed_5829 795360 - 796256 + | LysR family transcriptional regulator Smed_5830 796253 - 796699 + | hypothetical protein Smed_5831 797682 - 796801 - | aldose 1-epimerase fabG 798437 - 797682 - | 3-ketoacyl-(acyl-carrier-protein) reductase Smed_5833 799176 - 798445 - | ABC transporter related Smed_5834 800153 - 799173 - | monosaccharide-transporting ATPase Smed_5835 801266 - 800292 - | putative ABC transporter, periplasmic solute-binding protein TERM 488 801052 - 801008 - G 79 -8.3 -4.26076 | opp_overlap 801006, overlap 801009 CGATCGCGACGAAAA TCGCGTCCGGCCTGGAGGCGA TCG CCGCCTGCAGGTTGGCCACGG CCTGTTCGACTGCGC TERM 489 801051 - 801009 - G 70 -11.8 -3.15324 | opp_overlap 801006, overlap 801008 GATCGCGACGAAAAT CGCGTCCGGCCTGGAGGCGA TCG CCGCCTGCAGGTTGGCCACG GCCTGTTCGACTGCG TERM 490 801363 - 801332 - R 77 -12.2 -3.61398 | opp_overlap 801332 801331 CGTGCCGTCGAAGAA CTCCGCCCGCGATC GTGC GATCTCGGGCAGCG ATTTGAGAATTTCGC Smed_5836 802003 - 801311 - | GntR family transcriptional regulator Smed_5837 803263 - 802061 - | mandelate racemase/muconate lactonizing protein Smed_5838 803928 - 803266 - | GntR domain-containing protein TERM 491 803962 - 803974 + r 78 -6.2 -4.66537 | opp_overlap 803943 ATCGCCTCTCGAGCG GCCG GCCGA CGGC TTTTGTGTTCCGAGC Smed_5839 804683 - 804030 - | hypothetical protein TERM 492 804179 - 804135 - G 90 -19.9 -2.62184 | opp_overlap 804142, overlap 804137 CTCCTTTCCACACCA GATCCCAGGGCGCCCCGGCCG GAC CGACCGGACCGCTCTGGGTTC GAAGCAGGCCAAGCT TERM 493 804177 - 804137 - G 83 -16.7 -2.85351 | opp_overlap 804142, overlap 804135 CCTTTCCACACCAGA TCCCAGGGCGCCCCGGCCG GAC CGACCGGACCGCTCTGGGT TCGAAGCAGGCCAAG TERM 494 804594 - 804621 + g 76 -10.6 -3.96148 | gap 1, opp_overlap 804592 804591 TTGCTGACAACAGCG GACCGGGC-CTCG GAC CGAGAGCTTGGTC TTTCTCGTGCCCCCG Smed_5841 805831 - 805154 - | GntR family transcriptional regulator TERM 495 806494 - 806504 + G 76 -6.8 -4.40561 | CCATGGGCTGGACGC GCGA CGA TCGC TTCTTTTTCGCCGAC Smed_5842 806010 - 806945 + | SMP-30/gluconolaconase/LRE domain-containing protein Smed_5843 806942 - 807727 + | short-chain dehydrogenase/reductase SDR TERM 496 808871 - 808861 - g 79 -8.2 -4.36262 | AGAGCGATATCAAAA GCCC TTC GGGC AAGACCGACTACCAT Smed_5844 807741 - 808937 + | N-acylglucosamine 2-epimerase TERM 497 809309 - 809321 + G 70 -10.5 -3.57561 | CGGCGGCGGGGAGAG CGCCG AGG CGGCG TTTCGGGCCTTGAAG Smed_5845 809136 - 810383 + | mandelate racemase/muconate lactonizing protein Smed_5846 811225 - 810608 - | TetR family transcriptional regulator Smed_5847 811463 - 811792 + | hypothetical protein Smed_5848 811789 - 812295 + | activator of Hsp90 ATPase 1 family protein Smed_5849 812440 - 812724 + | hypothetical protein Smed_5850 813787 - 812801 - | alcohol dehydrogenase Smed_5851 813889 - 814788 + | LysR family transcriptional regulator Smed_5852 815129 - 814914 - | hypothetical protein Smed_5853 816439 - 815252 - | peptidase M24 Smed_5854 816878 - 816465 - | cupin 2 domain-containing protein TERM 498 816552 - 816570 + g 73 -3 -4.7373 | overlap 816555 GGCGACGAAGAGTTG CATCGGGC CGT GTCCCGTG TTTTTCGTCGAGTGA Smed_5855 817754 - 816912 - | hypothetical protein TERM 499 817032 - 817012 - G 83 -6.9 -4.82901 | CTTGCGCCATAAAAA CCATTGC AGCCTGA GCAATGG TCCAGGATGTAGCGT Smed_5856 818962 - 817766 - | hypothetical protein TERM 500 818296 - 818282 - G 71 -4.9 -4.42062 | opp_overlap 818282, overlap 818278 CACGCCTGAAAGAAA CCCGC TATCT GCGAG CTTCTCCATCGTGCG Smed_5857 819044 - 819706 + | TetR family transcriptional regulator Smed_5858 820037 - 821344 + | extracellular solute-binding protein TERM 501 821359 - 821393 + F 80 -9.2 -4.20516 | overlap 821356 821360 AAGGGCGCTGTTCCG TGGGAGTGAGCCCG CCGCTTC TGGGCTCCCTCCCC TTTCTTCACTGGCAC TERM 502 821360 - 821392 + F 76 -12.7 -3.11988 | overlap 821356 821359 AGGGCGCTGTTCCGT GGGAGTGAGCCCG CCGCTTC TGGGCTCCCTCCC CTTTCTTCACTGGCA Smed_5859 821512 - 822417 + | binding-protein-dependent transport systems inner membrane component Smed_5860 822419 - 823378 + | binding-protein-dependent transport systems inner membrane component Smed_5861 823375 - 823578 + | hypothetical protein Smed_5862 823575 - 824684 + | ABC transporter related Smed_5863 824684 - 825760 + | ABC transporter related Smed_5864 826879 - 825905 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 503 826736 - 826718 - G 72 -3.8 -4.59773 | gap 1 TGCGAGCTGGAAAAA CGC-CGG TGGGAT CCGCGCG CGCACGATGACAATC Smed_5865 827594 - 826902 - | GntR domain-containing protein Smed_5866 828766 - 827597 - | mandelate racemase/muconate lactonizing protein Smed_5867 829711 - 828824 - | xylose isomerase domain-containing protein TERM 504 829090 - 829100 + g 71 -8.2 -3.88232 | GATGACCCAGACCTG CCGC AAA GCGG TTGTTATCTGCCACG Smed_5868 830028 - 830879 + | xylose isomerase domain-containing protein Smed_5869 831673 - 831026 - | glutathione S-transferase domain-containing protein Smed_5870 833450 - 831684 - | ferredoxin TERM 505 832943 - 832921 - G 76 -5.6 -4.66163 | opp_overlap 832935 AGCGCCACCGAAAAA GTATCGCT CCCCTCC AGCGACAC ATTCGCCGTGTTACC TERM 506 833041 - 832983 - G 70 -9.8 -3.53811 | gap 4, opp_overlap 833018 GCCATTCGGCTGAAA GCGATATCCCG-TC-A-GCGCCGAGACAAC CGC ATCGGC-CGGCGCATTGAGCGGGATACCGC GAAGCGCCAGTTGTT Smed_5871 834380 - 833475 - | hypothetical protein TERM 507 835446 - 835434 - g 76 -6.2 -4.63218 | overlap 835443 CGCTGCGCAAGAAAA CCGC AGAAA GCGG CGGGACCGGCACGCA Smed_5872 834719 - 835486 + | GntR family transcriptional regulator Smed_5873 835540 - 836634 + | basic membrane lipoprotein TERM 508 836679 - 836648 - f 100 -15.9 -4.07885 | opp_overlap 836656 GAGCCGCCGGCAAAA GGACATGACCGGC GGACAT GCCGGTCGTGTCC AGATCCCTCCCCTCG Smed_5874 836723 - 838258 + | ABC transporter related TERM 509 838281 - 838264 - g 73 -6.9 -4.27467 | opp_overlap 838273 838274 TGAGAATTGAACAAA GGCCGGA ACCG TCCGCCC AGATGCGGATCGCCG TERM 510 838530 - 838559 + G 73 -6.9 -4.38712 | overlap 838533 GGACAACTGATCATC GGTGCCATCGCCG CCTG CGGCGTCGGCCTC TTTTATCCCAATCCG Smed_5875 838242 - 839309 + | inner-membrane translocator Smed_5876 839309 - 840229 + | inner-membrane translocator Smed_5877 840260 - 841042 + | streptomycin 3''-adenylyltransferase Smed_5878 842254 - 841082 - | major facilitator transporter TERM 511 841765 - 841749 - G 70 -10.1 -3.54424 | CGCCAGCCCGCGAAA TCGGCGA CCG CCGCCGA CAGCGGGACGCCCGC TERM 512 841956 - 841927 - G 83 -14.3 -3.40403 | gap 1 GCGCGGCGACGAGAA GCGGCAGGGCCGGT GCG ACCG-CGCTGCCGC CAAGCCCGACGGCAA TERM 513 842616 - 842583 - g 100 -16.7 -4.07568 | overlap 842568 842584 CCGGCTGGGGCAAAA CCCCGGCGCTGCTCG CGAT CGAGCAGCACCCGGA AGTCGAAGAAATCCA TERM 514 842615 - 842584 - g 90 -18 -3.04398 | overlap 842568 842583 CGGCTGGGGCAAAAC CCCGGCGCTGCTCG CGAT CGAGCAGCACCCGG AAGTCGAAGAAATCC Smed_5879 842303 - 842863 + | AsnC family transcriptional regulator Smed_5880 844006 - 842876 - | FAD dependent oxidoreductase TERM 515 843232 - 843267 + g 81 -15.3 -3.01712 | opp_overlap 843230 843231, overlap 843248 CGTCCAGTGAGAAGG TGCCGCCCGGCGCCG GCCGCA CGGCGACGCGCGGCG TGTTCAAGACGGCGC Smed_5881 845570 - 844062 - | polar amino acid ABC transporter, inner membrane subunit Smed_5882 846581 - 845745 - | extracellular solute-binding protein TERM 516 846709 - 846741 + H 100 -15 -5.0916 | opp_overlap 846713 ACTTCTCACGGCTCA GAGACCGGTCTC ACTCTCTAA GAGACCGGTCTC TTTTTCTGTTCGCAA Smed_5883 846809 - 847879 + | periplasmic binding protein/LacI transcriptional regulator TERM 517 847902 - 847938 + F 74 -13.7 -2.58861 | gap 1, opp_overlap 847898, overlap 847901 CCTGAAAACATCCTG CCCTGGCGCGG-CCGG CCGAAA TCGGATCGCGCCGGGG GTTCTGCCGCTCGTG Smed_5884 848021 - 848815 + | methyltransferase type 11 Smed_5885 848915 - 849895 + | DeoR family transcriptional regulator Smed_5886 850966 - 849926 - | periplasmic binding protein/LacI transcriptional regulator Smed_5887 852063 - 851017 - | monosaccharide-transporting ATPase TERM 518 851918 - 851904 - G 74 -5.6 -4.49389 | ATTGCAGAATGAAAA CTGCGC TTT GCGGAG AGGCGAATCCACCGG Smed_5888 853616 - 852060 - | ABC transporter related TERM 519 852685 - 852658 - G 72 -12 -3.28712 | opp_overlap 852638 852655 852658 852658 CCGGCGGCGGGAGAA CGCGCGCCGAAA AGGG TTTCGGCAAGCG CAGTCTTTCCAACGC mtnK 853707 - 854996 + | methylthioribose kinase mtnA 854993 - 856087 + | methylthioribose-1-phosphate isomerase Smed_5891 857031 - 856144 - | LysR family transcriptional regulator Smed_5892 857131 - 857853 + | short-chain dehydrogenase/reductase SDR Smed_5893 857980 - 858309 + | hypothetical protein TERM 520 858991 - 858957 - g 74 -14.8 -2.60813 | opp_overlap 858984, overlap 858956 858954 CACCCGCTCAAATAT CTGCGCGCGCTGGCCG TCG CAGTCCGCGCGCGCGG TGGCGCGCTTTTCGC TERM 521 858984 - 858999 + G 83 -11.8 -4.07568 | opp_overlap 858957 858956 858954 GCCGTCGCAGTCCGC GCGCGC GGTG GCGCGC TTTTCGCCGACACCG TERM 522 859327 - 859306 - g 91 -9.3 -4.55023 | opp_overlap 859309, overlap 859308 GTGAAGACCATAAAA CCGGCGCCG TCGA CGATGCCGG CGAGCGCTTTGCGAG TERM 523 859400 - 859436 + G 74 -9.3 -3.87994 | opp_overlap 859391 CGAAACGCACAGATG GTCGGGGCAGGTGATGG AAA CCATCGACTACACCGGC TTTATCGGGCTCAAT Smed_5894 858405 - 859925 + | FAD dependent oxidoreductase Smed_5895 860073 - 861143 + | signal transduction histidine kinase Smed_5896 862232 - 861207 - | sulfate ABC transporter, periplasmic sulfate-binding protein Smed_5897 862969 - 862382 - | hypothetical protein Smed_5898 863062 - 863241 + | hypothetical protein Smed_5899 864523 - 863309 - | protein of unknown function DUF395 YeeE/YedE Smed_5900 865452 - 864541 - | rhodanese domain-containing protein TERM 524 866048 - 866031 - g 76 -5.5 -4.56597 | opp_overlap 866034, overlap 866034 866035 CCCGTCGCGTAAAAA GCATCTG TCGG CAGGTGC TTGGGAACCAAGCCG Smed_5901 865787 - 867856 + | UvrD/REP helicase Smed_5902 868809 - 867886 - | LysR family transcriptional regulator TERM 525 867989 - 868019 + g 71 -14.1 -2.62184 | overlap 867992 ATGTAGCTTGAATTG CGATGCACTGCGA CCACC TCGCGGTGCATTG TCGTCTCCGGCAGGC TERM 526 867992 - 868016 + g 74 -12.2 -3.46602 | overlap 867989 TAGCTTGAATTGCGA TGCACTGCGA CCACC TCGCGGTGCA TTGTCGTCTCCGGCA TERM 527 869171 - 869158 - g 71 -9.5 -3.7108 | opp_overlap 869161 ATGTCGATATCGAAA GCGCC ACCC GGCGC GGAGTGCCGGTGCTG Smed_5903 868905 - 869891 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 528 870260 - 870272 + G 74 -10.5 -3.78775 | CCAGCGCTCTTGCTC GCGGC ATC GCCGC TTTCGTGCTCGACGG Smed_5904 869899 - 870612 + | dimethylmenaquinone methyltransferase Smed_5905 870674 - 871651 + | hypothetical protein Smed_5906 871648 - 872130 + | putative tricarboxylic transport membrane protein Smed_5907 872130 - 873632 + | hypothetical protein TERM 529 873666 - 873653 - f 77 -2.4 -5.04385 | CATAGCGGGAAAAAA CATG TCAGAT CATG TCATCCTTGAGGCTG TERM 530 873745 - 873717 - g 73 -11 -3.55548 | gap 1, opp_overlap 873733 873734 GAAGACGTCCTCAAA GCTGCCGGTATGC GCCC GCA-ACCGGCGGC AACCGTCGCCGATAC TERM 531 873770 - 873786 + G 73 -6.5 -4.35483 | overlap 873772 CGATACGCTTGTTTA CGCCG ATCTGCG CGGCG TTTCTTCTCATGGCG Smed_5908 873654 - 874700 + | malate/L-lactate dehydrogenase Smed_5909 875258 - 874761 - | globin TERM 532 875622 - 875603 - g 72 -4.2 -4.56597 | gap 1 CGCCTTGTCGAAAAA GCTCGA-CG GTG CGCTCGCGC TCGTGACCGGCCGCA TERM 533 875789 - 875805 + G 83 -9.3 -4.25104 | TCTCGTGGCCGATAC CGCCAGC TGG GCGGGCG TTTTCATCGAGGACA Smed_5910 875397 - 876194 + | HAD family hydrolase TERM 534 876673 - 876701 + G 80 -5.4 -4.92777 | overlap 876686 TCGCCGCGGAACTGC GCCAGATG-GGTTT GAA GAACCGCATC-GGC TTTTTCCTTCATATT TERM 535 877013 - 876993 - g 71 -4.6 -4.39828 | AAGACCGTCAGAAAA GCGCGCGA AAGCA TCGAGCAC CGCAACCTCATCATA Smed_5911 876240 - 877643 + | alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 536 878004 - 877983 - g 70 -7.2 -4.08692 | overlap 877985 GAATCGCGGCGAAAA GATCGGGC TCGTTG GCCCGAAC GGGGCGGGAAAGACG TERM 537 879145 - 879177 + G 76 -12.7 -3.46106 | gap 1, overlap 879143 879172 GACCGCTTTCCCAAG GCCGGACAGGCGCC ACTCCG GGCGC-TGGCCGGC TGTTTCGGCTTTTCG Smed_5912 877837 - 879519 + | ABC transporter related TERM 538 879933 - 879906 - T 72 -4.8 -4.70046 | gap 1 CATAAAACGAGAAAA TGTCCGCC-AATG TCG CATAAGGCGGTCA ATCGCTTAGCAGGTG TERM 539 880253 - 880267 + T 72 -8.5 -3.90112 | TTCCCCGCACGTTGG CGCCG CCTTT CGGCG TTTAATTGGGAAAGC Smed_5914 881166 - 880576 - | hypothetical protein TERM 540 880736 - 880710 - G 70 -7.2 -4.08767 | opp_overlap 880710 GGGAGTTGTCGAAAA CCATACCGCGGT CGG AACGCAGGATGG CTTTGCGGATGAGTG TERM 541 881014 - 881035 + g 72 -12.3 -3.32647 | opp_overlap 881017, overlap 881003 CTCGGCTGCCTTATA GGACGCTTC CGTG GAGGCGTCC TTGATCTCCTTGCGC Smed_5915 881519 - 881163 - | hypothetical protein Smed_5917 882592 - 882320 - | hypothetical protein Smed_5918 883048 - 882737 - | putative transmembrane protein Smed_5919 883295 - 883032 - | cytochrome oxidase maturation protein, cbb3-type Smed_5920 885559 - 883292 - | copper-translocating P-type ATPase Smed_5921 886368 - 885562 - | hypothetical protein TERM 542 885839 - 885813 - G 72 -3.7 -4.61527 | gap 1, overlap 885804 885815 885828 AAAATCCGGCAAAAA TCGC-GCCGATG AAAA CACCGACTGCAA GCATGGCCCAGCCGG Smed_5922 886587 - 886396 - | hypothetical protein Smed_5923 887468 - 886587 - | cytochrome c oxidase, cbb3-type, subunit III Smed_5924 887629 - 887459 - | Cbb3-type cytochrome oxidase component Smed_5925 888403 - 887651 - | cytochrome c oxidase, cbb3-type, subunit II Smed_5926 890081 - 888408 - | cytochrome c oxidase, cbb3-type, subunit I TERM 543 888924 - 888900 - G 71 -8.5 -3.89881 | overlap 888903 ACGAACCGCGAGAAA CGAGCCCTCGA AGG TCGAGAGGCCG TAGAAGAAGGCGGCC Smed_5927 891145 - 890465 - | cyclic nucleotide-binding protein Smed_5928 891381 - 891175 - | cytochrome oxidase maturation protein, cbb3-type Smed_5929 893651 - 891378 - | copper-translocating P-type ATPase Smed_5930 894151 - 893648 - | FixH family protein TERM 544 893788 - 893770 - G 100 -10.2 -5.48213 | overlap 893772 CACCCAAAACAAAAA CGCCCTCG CCC CGAGGGTG GAGCTCGACGCGAAG Smed_5931 895722 - 894148 - | cytochrome c oxidase cbb3 type accessory protein FixG TERM 545 894902 - 894915 + g 81 -3.7 -5.0538 | overlap 894903 TCTCCGACGACCTCG CCGGC CGCA GCCGA TTTTTTCGCATGCCG TERM 546 895851 - 895866 + r 71 -10.4 -3.53224 | CCATAGGGCGTTGAA GGGAGC GGTT GCTCCC TTTACGAACGAAATC TERM 547 895931 - 895908 - R 89 -16 -3.21099 | opp_overlap 895908 GCCCGTGACCAGGAA TCGGCCGCGC GGGT GCACGGCCGA TTGATCGAGGGCCTC TERM 548 895908 - 895931 + r 79 -13.8 -3.14344 | opp_overlap 895908 GCCCGTGACCAGGAA TCGGCCGCGC GGGT GCACGGCCGA TTGATCGAGGGCCTC Smed_5932 896815 - 895946 - | cytochrome c oxidase, cbb3-type, subunit III TERM 549 895999 - 896048 + g 93 -18 -3.2614 | gap 2, overlap 896002 GCTCTTTCACCACCG GATCGCCGAGGCGCGGCAGCCATG CGGG CATGAC-GCCGTGCTTCGGCG-TC TTCATCTGCGCGATC TERM 550 896002 - 896046 + g 95 -20.8 -3.19602 | gap 1, overlap 895999 CTTTCACCACCGGAT CGCCGAGGCGCGGCAGCCATG CGGG CATGAC-GCCGTGCTTCGGCG TCTTCATCTGCGCGA TERM 551 896101 - 896129 + g 70 -7.4 -4.07647 | gap 1, overlap 896077 ACAGCCAGATCGCAT CGGCGAGGTTGGG TGCT CCCA-TCTCGCGG TTTCCTTTCGCGTCT Smed_5933 896971 - 896819 - | Cbb3-type cytochrome oxidase component Smed_5934 897715 - 896984 - | cytochrome c oxidase, cbb3-type, subunit II Smed_5935 899348 - 897729 - | cytochrome c oxidase, cbb3-type, subunit I TERM 552 898931 - 898886 - G 74 -5.9 -4.43859 | GATAACCCCAGAAAA CGAACCAGCCGAGATCACCGC CGAA GAGGCGCGCTCGACTCGTGCG CTGAACCACATAGAA Smed_5937 900295 - 899948 - | response regulator receiver protein Smed_5938 901186 - 900506 - | flavin reductase domain-containing protein TERM 553 900676 - 900643 - G 76 -8.8 -4.19238 | gap 1, opp_overlap 900643, overlap 900644 900664 CGCCCAATGGGAAAA GCGCGCCGTGGCGCT CCAAC ACCGCGACGGCGC-C GATCTCTCCGCCCGC Smed_5939 901806 - 902605 + | hypothetical protein Smed_5940 903954 - 902866 - | feruloyl esterase Smed_5941 905169 - 904243 - | LysR family transcriptional regulator TERM 554 906836 - 906814 - H 77 -7.7 -4.37092 | ACGCCCGCCACAAAA GTCAGCGTC ACCAG GACGCCAAC GCCGGGCGTCGTCAT Smed_5945 906966 - 907238 + | hypothetical protein Smed_5946 907235 - 907579 + | hypothetical protein TERM 555 908292 - 908271 - T 71 -7.1 -4.1822 | overlap 908273 GCGGATGCCAACAAA CAGCGCTCG GTAT CGGGCGCAG AATGGAGCGCGCAAG TERM 556 908380 - 908399 + T 78 -7.8 -4.42806 | CTGCTTTTGGTGCGG CTTCGCCG GTAA CGCCGAAG TTTGTTTCCCCGTCA TERM 557 909265 - 909284 + T 72 -4.9 -4.59109 | opp_overlap 909251, overlap 909267 ACTTCGCAAGACAGT CGCGGAG GCTCAA CTCCGAG TTTTTCAACGATATC Smed_5948 910120 - 909344 - | LysR family transcriptional regulator Smed_5950 911946 - 910567 - | virulence factor family protein Smed_5951 914552 - 911943 - | hypothetical protein Smed_5952 915932 - 914865 - | signal transduction histidine kinase Smed_5953 916369 - 915932 - | response regulator receiver protein Smed_5954 917861 - 916362 - | integral membrane sensor signal transduction histidine kinase TERM 558 919170 - 919150 - H 75 -5.4 -4.63526 | overlap 919152 ACAAGGATAAAGAAA TCGAACGC GTCGA GCGTCCAA CCAAGAAAACTCGCG TERM 559 919909 - 919940 + G 77 -2.2 -5.00616 | gap 1, overlap 919910 919919 GGGGAGGCACCGGAT GCGGAGCGAGCCAAG CGT CTTGGTGC-CTTCGA TTTTTTGACCAAGCC Smed_5956 919639 - 921036 + | two component, sigma54 specific, Fis family transcriptional regulator Smed_5957 921261 - 922094 + | hypothetical protein Smed_5958 922185 - 922793 + | hypothetical protein Smed_5959 923084 - 923464 + | hypothetical protein Smed_5960 923465 - 923794 + | hypothetical protein Smed_5961 923927 - 924187 + | CopG family transcriptional regulator TERM 560 925659 - 925633 - f 70 -5 -4.43307 | overlap 925635 TGCGGAACAAAAGAA TGGACGAGCGGC CCG GCTGATCGTCTA AGCGTAACTATGCCC TERM 561 926119 - 926092 - f 83 -5.5 -4.98672 | overlap 926110 GCTAAAAAGACAAAA GCCTGGTGC GGGAAGAGAT GCACCGGGC TGCATAGTGACTGAC Smed_5964 926572 - 926895 + | hypothetical protein TERM 562 927089 - 927037 - T 71 -10 -3.61398 | opp_overlap 927078 927079 TGGCGGGTGGAAGAA CTGGCGTCATCCAATC-GCCATTGAG GTT CTCAAGGGCCGACTCC-TGACGCCAG GCTTTCACTGCCATC Smed_5966 927468 - 927094 - | hypothetical protein TERM 563 927262 - 927278 + g 71 -5.1 -4.431 | CTTCGGATAGGGTTT GGTCC GCCGATA GGACC TTTTATGCGTAGGTC TERM 564 927812 - 927791 - g 75 -4.4 -4.79223 | CGACACCACTAAAAA CATGGCAC GCTTTT ACGCCATG TCGATCGAACCGGAT Smed_5967 927738 - 927989 + | WGR domain-containing protein TERM 565 928608 - 928628 + T 70 -3.8 -4.69664 | opp_overlap 928607, overlap 928609 928624 AATTCTTGAGCACAT CCGCGAGG ACCTG CCGCGCGA TTTTTGCGTGGTGTG Smed_5970 929574 - 928849 - | helix-turn-helix type 11 domain-containing protein TERM 566 929050 - 929000 - G 74 -9.7 -3.90744 | TCGGTCCGGAAATAA CGATACGCCTCCCGAAGCTCG-CAC CAC GCGGCGAGCACCCGGACGCG-ATCG AAGAATGCGATAACG TERM 567 929435 - 929424 - G 70 -7.2 -4.07568 | opp_overlap 929423 TCGGCTCGCCCAAAA CCGG CACG CCGG ATGCTTCCAACGCTG Smed_5971 929726 - 931201 + | hypothetical protein TERM 568 931301 - 931274 - f 71 -10.6 -3.56325 | gap 1, overlap 931287 CGGTGAGAAGGATAA GCTGTCGC-AAGG ATC CCTTTGCGACGGC GCGACGGGCGCGTGT Smed_5972 931404 - 931541 + | hypothetical protein TERM 569 932410 - 932438 + F 75 -11.8 -3.29144 | opp_overlap 932416, overlap 932416 GACGCGTCGTGCGCC CATCAATGGCCG AGCGG CGACCATTGATG TTCTGCGCCACATGG TERM 570 933626 - 933612 - g 100 -7.8 -5.51402 | overlap 933614 AGACATTTAAAAAAA CGCTGA TCG CCAGCG AGCAGGACAGGCCGA TERM 571 933750 - 933776 + G 78 -10 -4.08216 | opp_overlap 933741 933736, overlap 933739 ACATGACGCGCACCC GCGGCTGGTGTC AGC GCGGCCAGCCGC TTTTCGCCAGAATAC Smed_5976 933359 - 934210 + | transposase Smed_5977 934933 - 934253 - | flavin reductase domain-containing protein Smed_5978 936336 - 935242 - | ferredoxin Smed_5979 937546 - 936308 - | Rieske (2Fe-2S) domain-containing protein Smed_5980 937694 - 938572 + | LysR family transcriptional regulator TERM 572 939047 - 939026 - T 79 -5.8 -4.7497 | opp_overlap 939026 939044, overlap 939028 GTGACTGACTAAAAA TGGGACCG AGCGAG CGGTCCGA TGTACTCGGTTCTGA Smed_5982 939309 - 939019 - | hypothetical protein Smed_5983 939549 - 939938 + | hypothetical protein TERM 573 941222 - 941192 - f 84 -15.4 -2.87132 | GGCTGCTGCCATAGA CGCCGGTGCCTCTC GAT GAGAGGCACCGGTC CGGCAAGTCTCAACC Smed_5985 941255 - 942697 + | glucan 1,4-alpha-glucosidase TERM 574 944535 - 944523 - g 71 -9.1 -3.78934 | CGTTGTGGACAAGAA CCAGC GCA GCTGG GACCACGAAAACCTT Smed_5986 942790 - 944661 + | putative dehydrogenase large subunit protein Smed_5987 944753 - 945865 + | hypothetical protein Smed_5988 945862 - 946341 + | hypothetical protein Smed_5989 946380 - 947318 + | xylose isomerase domain-containing protein TERM 575 947407 - 947397 - f 84 -6.8 -4.77757 | overlap 947398 GGTGAAAAATCAAAA TCGC ACG GCGA CGCGGAAAGGTGTCG Smed_5990 947701 - 948720 + | xylose isomerase domain-containing protein TERM 576 949365 - 949394 + G 83 -4.9 -5.06414 | CAGAGATCGATTTTC TTCTCACGATAGG GCTT CCAGACGTGGGAA TTTTTGTTGCGCAGG Smed_5991 948887 - 949711 + | beta-lactamase domain-containing protein Smed_5992 949743 - 951398 + | thiamine pyrophosphate binding domain-containing protein Smed_5993 952221 - 951772 - | MucR family transcriptional regulator Smed_5994 952533 - 952778 + | hypothetical protein Smed_5995 953160 - 952951 - | hypothetical protein TERM 577 953294 - 953304 + G 72 -2.4 -4.68655 | CATCTATGGTTTGCT AGCC GTC GGCC TTTATTTTACAATTC Smed_5996 953229 - 954647 + | amino acid carrier protein Smed_5997 954699 - 954905 + | hypothetical protein Smed_5998 955758 - 955231 - | NUDIX hydrolase Smed_5999 955823 - 956017 + | hypothetical protein Smed_6000 957981 - 956458 - | integrase catalytic region TERM 578 957017 - 957031 + g 83 -7 -4.90525 | overlap 957010 CGCTTGACCACCTTG GCTCCG TCA CGGTGC TTTTCTTTCAGCTTG Smed_6001 958547 - 958095 - | hypothetical protein TERM 579 959066 - 959050 - R 81 -10.9 -3.81951 | TTTTAGACGACTAAA TTCCACC GCC GGTGGAA AGAGGTCCTTCACGG Smed_6004 961212 - 960331 - | formyltetrahydrofolate deformylase Smed_6005 962661 - 961354 - | glutamine synthetase catalytic region Smed_6006 964076 - 962748 - | ferredoxin-dependent glutamate synthase Smed_6007 964777 - 964091 - | glutamate synthase alpha subunit TERM 580 964793 - 964819 + r 79 -5.8 -4.77036 | GGAGCAAACTTTCGT GTCGTGTGAAGC GCG GCTTTAAGCGGC TTTTTCGTGATCCCA Smed_6008 965716 - 964811 - | glutamine amidotransferase class-II Smed_6009 966466 - 965807 - | XRE family transcriptional regulator TERM 581 967443 - 967424 - R 71 -7.8 -4.06502 | GACCGGCAAATGAAA TGGCAGGT ATCC ACCGGCCA CGGCAAGCGCTCGCT Smed_6012 968398 - 968108 - | hypothetical protein Smed_6016 970665 - 971696 + | filamentation induced by cAMP protein Fic Smed_6018 972642 - 972205 - | hypothetical protein Smed_6020 974157 - 973891 - | transposase IS3/IS911 family protein Smed_6021 974325 - 975110 + | hypothetical protein Smed_6022 975110 - 975298 + | hypothetical protein Smed_6023 976340 - 975394 - | transposase TERM 582 975976 - 975994 + g 100 -4.4 -5.64274 | overlap 975978 GTCGGGCCGCTCCCG TTCGCTGG CGA CCAGCGTC TTTTTTTATAACTCA TERM 583 975978 - 975992 + g 95 -11.4 -4.46105 | overlap 975976 CGGGCCGCTCCCGTT CGCTGG CGA CCAGCG TCTTTTTTTATAACT TERM 584 976414 - 976395 - R 75 -3.6 -4.83169 | ATTTGCGCAGAAAAA GGAATC CCCTTTCC GATTCC GCCTAAATGCATCCC TERM 585 976979 - 977002 + r 100 -11.8 -4.43221 | overlap 976995 976997 GAACTTCAGGCCGAT CTTACCGCTT GCAG AAGCGGTGAG TTTTGTCGCCTATTT Smed_6025 977415 - 976969 - | MucR family transcriptional regulator TERM 586 977633 - 977650 + r 83 -5.5 -4.99043 | GCGCGGAAACGGGTG CACTCGG CGTG CTGGGTG TTTTCTTTGTGCCAG Smed_6027 979300 - 978191 - | oxidoreductase molybdopterin binding Smed_6028 981034 - 979682 - | integral membrane sensor signal transduction histidine kinase Smed_6029 981692 - 981024 - | two component transcriptional regulator Smed_6030 981844 - 982068 + | hypothetical protein TERM 587 982496 - 982461 - T 100 -20.6 -4.58283 | opp_overlap 982461 982465, overlap 982465 TAATTCCGGTAAAAA CAAACAAGGACGCTGC ACCT GCGGCGTCCTTGTTTG TTTTTGCGGGGCATT TERM 588 982461 - 982496 + T 100 -22.8 -4.57341 | opp_overlap 982461 982465, overlap 982465 TAATTCCGGTAAAAA CAAACAAGGACGCTGC ACCT GCGGCGTCCTTGTTTG TTTTTGCGGGGCATT TERM 589 982492 - 982465 - T 100 -15.6 -4.85782 | opp_overlap 982461 982465, overlap 982461 TCCGGTAAAAACAAA CAAGGACGCTGC ACCT GCGGCGTCCTTG TTTGTTTTTGCGGGG TERM 590 982465 - 982492 + T 100 -17.8 -4.85782 | opp_overlap 982465 982461, overlap 982461 TCCGGTAAAAACAAA CAAGGACGCTGC ACCT GCGGCGTCCTTG TTTGTTTTTGCGGGG Smed_6033 984676 - 982934 - | sulfatase Smed_6034 986168 - 984966 - | transposase mutator type Smed_6036 986612 - 986878 + | hypothetical protein Smed_6037 986882 - 987427 + | cytochrome B561 TERM 591 987448 - 987483 + F 100 -22.8 -4.57341 | opp_overlap 987448 987452, overlap 987452 TAATTCCGGTAAAAA CAAACAAGGACGCTGC ACCT GCGGCGTCCTTGTTTG TTTTTGCGGGGCATT TERM 592 987483 - 987448 - f 100 -20.6 -4.58283 | opp_overlap 987448 987452, overlap 987452 TAATTCCGGTAAAAA CAAACAAGGACGCTGC ACCT GCGGCGTCCTTGTTTG TTTTTGCGGGGCATT TERM 593 987479 - 987452 - f 100 -15.6 -4.85782 | opp_overlap 987452 987448, overlap 987448 TCCGGTAAAAACAAA CAAGGACGCTGC ACCT GCGGCGTCCTTG TTTGTTTTTGCGGGG TERM 594 987452 - 987479 + F 100 -17.8 -4.85782 | opp_overlap 987448 987452, overlap 987448 TCCGGTAAAAACAAA CAAGGACGCTGC ACCT GCGGCGTCCTTG TTTGTTTTTGCGGGG Smed_6040 988035 - 988247 + | hypothetical protein TERM 595 988967 - 988935 - f 100 -15.5 -4.04474 | opp_overlap 988927 988926, overlap 988937 ATAGCCTGACACAAA TAGCGCTGCAGCGGG GGA CTCGCTGCAGCGCCG GACGCGACGTATTCT TERM 596 988965 - 988937 - f 100 -20.3 -3.615 | opp_overlap 988927 988926, overlap 988935 AGCCTGACACAAATA GCGCTGCAGCGGG GGA CTCGCTGCAGCGC CGGACGCGACGTATT Smed_6041 989619 - 991520 + | K potassium transporter TERM 597 992487 - 992509 + F 71 -7.1 -4.1822 | gap 1 ATGATGGTCCCTCCT GCTCGT-GAT CGCG ATCTACGAGC TTTCTTGGGATACAA Smed_6043 992753 - 992983 + | hypothetical protein Smed_6044 993696 - 993016 - | flavin reductase domain-containing protein TERM 598 993186 - 993153 - G 76 -8.8 -4.19238 | gap 1, opp_overlap 993153, overlap 993154 993174 CGCCCAATGGGAAAA GCGCGCCGTGGCGCT CCAAC ACCGCGACGGCGC-C GATCTCTCCGCCCGC TERM 599 995573 - 995552 - R 79 -5.8 -4.7497 | opp_overlap 995552 995570, overlap 995554 GTGACTGACTAAAAA TGGGACCG AGCGAG CGGTCCGA TGTACTCGGTTCTGA Smed_6048 995835 - 995545 - | hypothetical protein Smed_6049 996075 - 996464 + | hypothetical protein TERM 600 997748 - 997718 - g 79 -15.4 -2.87132 | GGCTGCTGCCATAGA CGCCGGTGCCTCTC GAT GAGAGGCACCGGTC CGGCAAGTCTCAACC Smed_6051 997658 - 998839 + | thiamine pyrophosphate binding domain-containing protein TERM 601 999024 - 999013 - f 72 -5.8 -4.42386 | GTCTCATGGAGAAAA TCCG ACAT CGGA AAGTGGATGTGCGAG Smed_6052 999051 - 999260 + | hypothetical protein Smed_6054 1000737 - 1001462 + | methyltransferase type 11 Smed_6057 1002554 - 1002099 - | MucR family transcriptional regulator Smed_6058 1002866 - 1003111 + | hypothetical protein Smed_6059 1003493 - 1003284 - | hypothetical protein TERM 602 1003627 - 1003637 + G 72 -2.4 -4.68655 | CATCTATGGTTTGCT AGCC GTC GGCC TTTATTTTACAATTC Smed_6060 1003562 - 1004980 + | amino acid carrier protein Smed_6061 1005032 - 1005238 + | hypothetical protein Smed_6062 1006040 - 1005564 - | NUDIX hydrolase Smed_6063 1006156 - 1006350 + | hypothetical protein Smed_6064 1006607 - 1006810 + | cold-shock DNA-binding domain-containing protein TERM 603 1006913 - 1006893 - f 86 -5.3 -5.0925 | opp_overlap 1006894 1006895, overlap 1006895 GCTCAAAACGAAAAA CACGGGATC CCC GCTTCCGTG ATTGCATACCGGTCC TERM 604 1006905 - 1006895 - f 74 -8.2 -4.16392 | opp_overlap 1006894 1006895, overlap 1006893 TCAAAACGAAAAACA CGGG ATC CCCG CTTCCGTGATTGCAT TERM 605 1007196 - 1007210 + F 74 -11.4 -3.53012 | GATTGGCGTACCTGC TGCCGG AGA CCGGCA TTTCAGAGCACGAGC Smed_6066 1007459 - 1007977 + | hypothetical protein TERM 606 1008008 - 1007991 - T 74 -6.9 -4.37658 | AAGCCGCGCACAAAA GGCCACA TGGC TGAGGCC GCAGCAATAGCGCGT Smed_6067 1008361 - 1008032 - | hypothetical protein Smed_6068 1008721 - 1008362 - | hypothetical protein TERM 607 1008397 - 1008441 + g 78 -14.2 -3.07043 | gap 1 CGGCGCATTCCCCTT TCGTCCAGACCGCCG-CGGCG CAGA TGCCGACGACGGTCCGGTCGA TCTTGCGCTGATCAG TERM 608 1009645 - 1009688 + H 88 -16 -3.15663 | gap 1, overlap 1009636 1009661 CCCCTCGCAGCCGGC CGG-GAGGCTCGTCATCGGCC CGC GGCCTTTGACGAGCCTCGCCA TTGATCCACATCAAT TERM 609 1009785 - 1009799 + G 81 -12.8 -3.71687 | opp_overlap 1009782 ACCTCTCAGACATCG CGGCGC AGT GCGCCG TTTCAAATCTTTTGG Smed_6070 1009721 - 1009942 + | hypothetical protein Smed_6071 1010113 - 1010370 + | hypothetical protein Smed_6072 1010426 - 1010602 + | hypothetical protein TERM 610 1010641 - 1010613 - f 100 -12.5 -5.1287 | overlap 1010636 1010639 CTTAGACGCAAAAAA GGCCCCTTCTC TCTCGAC GAGAAGAGGCC CGGCGTCTGAGCGTT TERM 611 1010714 - 1010731 + F 78 -8.3 -4.45485 | opp_overlap 1010711 TGCAATCGAAGATCG CCGCGCC GGGA GGCACGG TTTTATCCATCTGGT Smed_6073 1010845 - 1011291 + | XRE family transcriptional regulator Smed_6077 1012765 - 1012475 - | hypothetical protein Smed_6079 1013940 - 1014077 + | hypothetical protein TERM 612 1014486 - 1014502 + F 72 -5.9 -4.48741 | TCCTTCAGCGGATAG GAATGCA TTA TGTATTC TTTTGTCCTACCTTG TERM 613 1014791 - 1014763 - f 78 -11 -3.65827 | gap 1 CAAGGCTCATTGAAA TTCGGCGGATCGG GCTC CCGG-CCGCCGAA CCCACTCTCTTGGAG Smed_6080 1014919 - 1015053 + | exopeptide protein Smed_6081 1015252 - 1015503 + | acyl carrier protein TERM 614 1016813 - 1016801 - g 74 -5.5 -4.41494 | CACCGCGAAGGAAAA GCCTC AGG AAGGC GAAATCGTGGCTGTC groES 1016691 - 1016987 + | co-chaperonin GroES groEL 1017063 - 1018700 + | chaperonin GroEL TERM 615 1018739 - 1018758 + T 100 -15 -5.14563 | CCATTCGGATCTGAA GGGCGGCT CTCG AGCCGCCC TTTTTTGCTACGCAA Smed_6085 1021204 - 1020728 - | nuclease TERM 616 1021939 - 1021928 - R 75 -3.6 -4.83169 | overlap 1021929 ACCGTTTTATAAAAA GCCG ACTT CAGC GAGCTGAGCCAGGCC TERM 617 1022575 - 1022615 + r 100 -13.4 -4.51799 | gap 1, opp_overlap 1022569 1022582, overlap 1022582 TAACGAAAAGTCAGG AGAAGAACCCGTTTCCGCG GTCA CGCGGAAACGGGTT-TGCA TTTTATACCTTTCAT TERM 618 1022609 - 1022582 - R 100 -21.4 -3.85522 | opp_overlap 1022575 1022582, overlap 1022569 AAGTCAGGAGAAGAA CCCGTTTCCGCG GTCA CGCGGAAACGGG TTTGCATTTTATACC TERM 619 1022582 - 1022609 + r 100 -21.4 -3.96705 | opp_overlap 1022582 1022569, overlap 1022575 AAGTCAGGAGAAGAA CCCGTTTCCGCG GTCA CGCGGAAACGGG TTTGCATTTTATACC Smed_6088 1023818 - 1022631 - | peptidase C1A papain TERM 620 1022745 - 1022760 + g 78 -4.7 -4.72272 | GCCCTTGTCACCCCA CTCCT CGCCAT AGGAG TTTTTAATGAGGAAG TERM 621 1022792 - 1022808 + g 73 -6.5 -4.33151 | overlap 1022781 CGCCCCTCGTCTTGA TGCCGGG GTT CTTGGCA TTTTCCGTTGTGATG TERM 622 1023580 - 1023564 - G 73 -3.6 -4.72272 | CTTCGGCACGAAAAA GCGCCC CTCAT AGGCAC CTTGCAGCCTGATCT TERM 623 1026341 - 1026351 + G 71 -4.6 -4.43213 | GCACCGTCTGGCTTT GCGC AAG GTGC TTTTGGTGTATTGGC Smed_6089 1023923 - 1026844 + | lanthionine synthetase C family protein Smed_6090 1026941 - 1027183 + | hypothetical protein Smed_6093 1029389 - 1028826 - | yecA family protein TERM 624 1029062 - 1029095 + g 72 -7.3 -4.24002 | TGGCATCAAAGGTCT GATCATCGATCCTGG TGAA CCTGGGCCGGTGGTC TTTTGGCGTTTCGGC TERM 625 1029099 - 1029129 + g 70 -10.4 -3.65812 | overlap 1029100 GGGCCGGTGGTCTTT TGGCGTTTCGGCGA GGC TCGCCGAGATGCGG TTATATTCCGCAACG Smed_6094 1030258 - 1029386 - | transposase IS66 Smed_6095 1031571 - 1030312 - | RNA-directed DNA polymerase (Reverse transcriptase) Smed_6096 1031704 - 1032024 + | hypothetical protein Smed_6097 1032845 - 1032084 - | transposase IS66 TERM 626 1032480 - 1032437 - G 74 -12.7 -3.31144 | gap 3, overlap 1032440 GTTTGACCCGGACAA CAGCCGGCAC-GATGTCGAGCG CCT CGCT-GACATCCGTGCCGA-TG CAATGCAGGTCGAAC TERM 627 1032478 - 1032440 - G 76 -15.5 -2.53271 | overlap 1032437 TGACCCGGACAACAG CCGGCAC-GATGTCGAGCG CCT CGCT-GACATCCGTGCCGA TGCAATGCAGGTCGA Smed_6098 1033250 - 1032894 - | IS66 Orf2 family protein Smed_6100 1033805 - 1034119 + | hypothetical protein Smed_6101 1034829 - 1034185 - | methyltransferase type 11 Smed_6102 1035968 - 1034826 - | molybdopterin biosynthesis protein MoeB Smed_6103 1036251 - 1035973 - | thiamineS protein Smed_6104 1037152 - 1036289 - | hypothetical protein Smed_6105 1038107 - 1037145 - | hypothetical protein Smed_6106 1039384 - 1038167 - | hypothetical protein Smed_6107 1040751 - 1039381 - | TfuA domain-containing protein TERM 628 1039966 - 1039986 + g 86 -12.5 -4.08767 | GGTGTACTGCGAGAG CGGCATGGC CTT GCCTTGCCG TTTTGCGCAGATGGC TERM 629 1040659 - 1040681 + g 71 -6.2 -4.36127 | opp_overlap 1040663 1040664, overlap 1040652 1040677 AGCCGCGGGCGGAAA GTAATCTGCC TCC GGCAGGATGC TTTTAGCTTCTTCAA Smed_6108 1041941 - 1040751 - | hypothetical protein Smed_6109 1042245 - 1042012 - | hypothetical protein Smed_6110 1042628 - 1042395 - | hypothetical protein Smed_6111 1043170 - 1042937 - | hypothetical protein Smed_6112 1043553 - 1043320 - | hypothetical protein TERM 630 1044241 - 1044227 - g 90 -2.1 -5.42259 | gap 1, overlap 1044213 TCACGCGCAAAAAAA GAGTGC GCAT GC-CTC GGAGCAAAACCGGCC Smed_6113 1043881 - 1044827 + | transposase Smed_6114 1045146 - 1044913 - | hypothetical protein Smed_6118 1046959 - 1046196 - | transposase TERM 631 1047599 - 1047578 - g 72 -2.1 -4.76087 | overlap 1047574 CAGATAATAAACAAA CTGCCCAAG TCAA CGCGGGAAG TCTGACTTCGTTCAC Smed_6119 1047442 - 1048218 + | hypothetical protein Smed_6120 1048345 - 1049106 + | hypothetical protein TERM 632 1049481 - 1049528 + F 84 -15.4 -2.90723 | opp_overlap 1049465 1049464, overlap 1049506 CTGACCAGCTCCAAC CGGTCGGCGGCTTGCGTCTGCG TGGT CGCCGGAGCAGATCGCCGGCCG TCTGCTTGCCGATGG Smed_6122 1049871 - 1050131 + | transposase IS3/IS911 family protein TERM 633 1050495 - 1050476 - T 73 -11.4 -3.34947 | GAACAACGGGGAGAA CGTCAGCC GTCT GGCCGACG AACTGGGTATTCACC Smed_6124 1050767 - 1050558 - | hypothetical protein Smed_6125 1050875 - 1051744 + | integrase catalytic region Smed_6127 1053315 - 1052602 - | putative transposase Smed_6128 1053682 - 1053350 - | hypothetical protein TERM 634 1053628 - 1053650 + g 86 -16.2 -3.18429 | overlap 1053620 GCCCCACGGTCTCGT CCGGCCGCGG CGC CCGCGGCAGG TTGATCACAATTTTG Smed_6129 1055415 - 1053805 - | monophenol monooxygenase Smed_6130 1055872 - 1055480 - | hypothetical protein Smed_6131 1057840 - 1055900 - | multicopper oxidase type 3 Smed_6133 1058829 - 1059071 + | hypothetical protein Smed_6134 1059357 - 1059776 + | XRE family transcriptional regulator TERM 635 1060513 - 1060496 - T 76 -6.9 -4.44245 | AGATCACCGACAAAA GGGTGCG GAAC CGCATCC TCGGCCTAGGGCGTC Smed_6137 1061295 - 1060532 - | transposase TERM 636 1062222 - 1062240 + H 80 -9.6 -4.1899 | TGGCGTTCGTGTGTG TGGGTGCT CTG AGCATCCA TTTTAAGTCGGATCA Smed_6138 1062554 - 1064209 + | diguanylate cyclase/phosphodiesterase TERM 637 1064510 - 1064482 - g 80 -5.9 -4.78149 | opp_overlap 1064504, overlap 1064464 1064484 CCGAGAATTGAAAAA CGCCCTGGCGA CTCGCGT TGGCCAGGGTG GGCGGATCGTCCGCG Smed_6139 1064276 - 1065418 + | Pectate lyase Smed_6140 1065775 - 1066524 + | carbonate dehydratase TERM 638 1067017 - 1067039 + T 73 -12 -3.02263 | GCCTCGCTATGGTTC GTTGCGGGGA ACG TCCCGGCAAC TCTTGAGCAAGGTCT Smed_6141 1068441 - 1067101 - | aldehyde dehydrogenase Smed_6142 1068650 - 1069537 + | hypothetical protein TERM 639 1070340 - 1070369 + G 83 -14.3 -3.47227 | TCTTCTATAGGGGTT TGGCTGTCGTCGT CTTA ACGTCGGCAGCCA TTCTGCTCGTTCAGC TERM 640 1071381 - 1071396 + G 72 -2.4 -4.74767 | opp_overlap 1071372, overlap 1071383 CAATCACCACGATCG CGGGCT ACAA GGGCCG TTTTATGTTCATTAT Smed_6143 1070183 - 1071829 + | TRAG family protein Smed_6145 1073346 - 1072621 - | two component transcriptional regulator Smed_6146 1074547 - 1073399 - | GTPase - Sulfate adenylate transferase subunit 1-like protein Smed_6148 1075300 - 1074992 - | hypothetical protein Smed_6151 1077496 - 1076715 - | hypothetical protein Smed_6152 1078606 - 1077566 - | P-type DNA transfer ATPase VirB11 Smed_6153 1079764 - 1078646 - | conjugation TrbI family protein Smed_6154 1080642 - 1079761 - | P-type conjugative transfer protein VirB9 TERM 641 1079809 - 1079821 + g 74 -10.5 -3.74693 | ATCGTGTCTCACTGT GCCGG TGC CCGGC TTTCGTCCAATGGGA Smed_6155 1081352 - 1080639 - | VirB8 family protein Smed_6156 1081506 - 1081339 - | T-DNA transfer lipoprotein (virB7) Smed_6157 1082426 - 1081539 - | TrbL/VirB6 plasmid conjugal transfer protein TERM 642 1082439 - 1082475 + r 100 -8.7 -4.96848 | overlap 1082431 CATCGCTCCAACCTG GTTTGGCTCTTTCCACC GCA GGTGGGCGGAGTTGAAC TTTTTATCTGAGCCG Smed_6158 1083191 - 1082508 - | putative virB5 gene Smed_6159 1085574 - 1083205 - | type IV secretion/conjugal transfer ATPase TERM 643 1083727 - 1083756 + g 73 -12.9 -3.21218 | gap 1 GCCCACGCGATGGAG GAGGTATGCG-GCC GCC GGCGCGCAAACCTC TTCGTACTCCAGAAT Smed_6160 1085900 - 1085574 - | type IV secretory pathway VirB3 family protein Smed_6161 1086259 - 1085897 - | VIRB2 type IV secretion fmaily protein Smed_6162 1086980 - 1086273 - | lytic transglycosylase catalytic TERM 644 1088828 - 1088818 - g 93 -8.2 -5.12068 | overlap 1088819 CACAGTCAATAAAAA GGCG CTG CGCC CGAAGCCTAAGCCGA Smed_6165 1088723 - 1089133 + | hypothetical protein Smed_6166 1089507 - 1090595 + | feruloyl esterase Smed_6167 1091394 - 1090631 - | transposase Smed_6168 1092245 - 1091482 - | transposase Smed_6170 1092997 - 1093515 + | hypothetical protein TERM 645 1093546 - 1093529 - f 74 -6.9 -4.37658 | AAGCCGCGCACAAAA GGCCACA TGGC TGAGGCC GCAGCAATAGCGCGT TERM 646 1093907 - 1093951 + F 73 -12 -3.07043 | gap 1 CATTCAGCGCCCTTC TCGTCCAGACCGCCGCCGCGC AGAT GC-CGACGACGGTCCGGTCGA TCTTGCGCTGATCAG TERM 647 1095424 - 1095405 - f 71 -12.8 -2.50436 | opp_overlap 1095405, overlap 1095404 1095403 1095419 AACGAAGCGAAAAGC GCCGGCCC AATC GAGCCGGC TTCTGACCTCTCAGA TERM 648 1095635 - 1095617 - f 76 -11.7 -3.38951 | CCATCAAGACAGTAA GGCGGCA ATAAA TGCCGCC ACGAAAACGACTGCT TERM 649 1096109 - 1096095 - g 74 -2.1 -4.85599 | gap 1, overlap 1096096 1096097 GGTAGCCGACAAAAA GGT-CG GAGC CGCACC GAAGACCGCGCTCAT Smed_6176 1095835 - 1096131 + | hypothetical protein TERM 650 1096183 - 1096201 + F 88 -11.6 -4.1822 | opp_overlap 1096179 1096171, overlap 1096184 AATTGCAAGTACGAG CGCCCGGC TTC GCCGGGCC TTTCTTGCCGTCGAA TERM 651 1096184 - 1096200 + F 85 -15.1 -3.10611 | opp_overlap 1096179 1096171, overlap 1096183 ATTGCAAGTACGAGC GCCCGGC TTC GCCGGGC CTTTCTTGCCGTCGA TERM 652 1098530 - 1098548 + G 74 -11.8 -3.51329 | opp_overlap 1098532 GCCGTTCGTCGACGA GATCATCG CAC CGATGATC TTCTCATTGCCGCTC Smed_6177 1096824 - 1098650 + | D-fructose-6-phosphate amidotransferase Smed_6178 1098734 - 1099837 + | RND family efflux transporter MFP subunit TERM 653 1101485 - 1101508 + G 72 -3.9 -4.56597 | gap 1, overlap 1101488 GTCGTCAGCCTGCTG CTT-GTTCCG CGCAT CGGAACTGAG TTTTTGCCGCCACCC TERM 654 1103014 - 1102986 - g 71 -4.6 -4.46656 | gap 1, overlap 1102987 CCGATAAGACTAAAA CTCCT-GCTTGCG CTCT CACAAGCCAGGAT CAGTCAGGGACAACA Smed_6179 1099841 - 1103038 + | acriflavin resistance protein Smed_6181 1104914 - 1103589 - | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN Smed_6182 1105246 - 1104914 - | hypothetical protein Smed_6183 1106871 - 1105936 - | LysR family transcriptional regulator Smed_6184 1107126 - 1107716 + | acyltransferase NodA Smed_6185 1107713 - 1108366 + | polysaccharide deacetylase Smed_6186 1108381 - 1109661 + | glycosyl transferase family protein TERM 655 1110652 - 1110667 + G 71 -8.2 -3.86897 | AGTCCAACTGGATGG GCGCGC GGGT GTGCGC TTTCTGCAGCGTCCA TERM 656 1110677 - 1110698 + G 75 -4.3 -4.68103 | GTGCGCTTTCTGCAG CGTCCACCA AATC TCGAGGACG TTTTCTTACGGTTGA Smed_6187 1109669 - 1110736 + | nodulation factor exporter subunit NodI Smed_6188 1110740 - 1111528 + | ABC transporter Smed_6191 1115010 - 1113109 - | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein Smed_6192 1115909 - 1115010 - | sulfate adenylyltransferase subunit 2 Smed_6193 1117062 - 1116325 - | 3-ketoacyl-(acyl-carrier-protein) reductase NodG TERM 657 1116594 - 1116580 - G 72 -7.8 -4.11692 | opp_overlap 1116588, overlap 1116590 CAGCGACTTGGAAAA GCCGAT CAT ACCGGC CTTGGAGGCGCAGTA Smed_6194 1118761 - 1117553 - | Beta-ketoacyl synthase Smed_6195 1119045 - 1118764 - | NodF acyl carrier protein TERM 658 1119755 - 1119731 - H 73 -3.5 -4.81249 | overlap 1119732 TGTTAAATGGAAAAA CGCCTGAAATG ACC CATTCCACGCT GCCGCCTCAGCCATT Smed_6196 1119739 - 1120482 + | NodH sulfotransferase Smed_6197 1121281 - 1121667 + | transposase IS3/IS911 family protein Smed_6198 1121736 - 1122008 + | IS66 Orf2 family protein TERM 659 1123359 - 1123325 - g 71 -4.9 -4.4267 | gap 2, opp_overlap 1123350, overlap 1123326 CGGGAAAATCCAAAA CCGCCGAGGCGATCCGC TAC GCGC-TCACC-CGGCGC GAGGCGCTGGAGCGC TERM 660 1123520 - 1123549 + G 79 -10.7 -3.85698 | CCACCTTGTTGCAGA CGGCATTATGCCG CGCG CGGCATAAGGCGG TTTATGCCGACCGGC Smed_6199 1122133 - 1123782 + | transposase IS66 Smed_6201 1125585 - 1124662 - | phage integrase family protein Smed_6204 1127418 - 1126438 - | LysR family transcriptional regulator Smed_6205 1127886 - 1127473 - | hypothetical protein Smed_6209 1131315 - 1131665 + | hypothetical protein Smed_6211 1132358 - 1132528 + | hypothetical protein TERM 661 1132921 - 1132935 + F 77 -10 -3.85704 | GTGCTGGCTACGTCC GGCGAA ATG TTCGCC TTTACTGATTGGTCG TERM 662 1133399 - 1133426 + G 78 -4.8 -4.67635 | gap 1, overlap 1133400 1133404 CCGACGACAATCCCG ACGAGCTTCTCCG GCG CGGTGAAG-TCGA TTTTCTGATTTTCCC Smed_6212 1132969 - 1133928 + | LysR family transcriptional regulator TERM 663 1134189 - 1134213 + T 75 -8.6 -4.07568 | AGAAGTCCCCCGACG CCGATCTTCT GCGCG AGATGATCGG TTTTGCCGCCGAGCG TERM 664 1135004 - 1134979 - T 80 -14.7 -2.79133 | overlap 1134982 CAAGCCGCGAGCACA CAATGGCGCGC TGCA GCGCGCCGTTG CCGATCAGATCCGGC TERM 665 1135001 - 1134982 - T 71 -10.6 -3.54475 | overlap 1134979 GCCGCGAGCACACAA TGGCGCGC TGCA GCGCGCCG TTGCCGATCAGATCC Smed_6214 1136371 - 1135226 - | transposase IS116/IS110/IS902 family protein Smed_6217 1138336 - 1138091 - | SyrA protein involved in EPS production Smed_6219 1139704 - 1139387 - | ferredoxin III 4(4Fe-4S) nif-specific Smed_6220 1139904 - 1139701 - | hypothetical protein Smed_6221 1140875 - 1140378 - | nitrogen fixation protein NifX Smed_6222 1142789 - 1141362 - | nitrogenase MoFe cofactor biosynthesis protein NifE TERM 666 1141999 - 1141989 - G 78 -6.8 -4.57837 | overlap 1141978 AGAGCCCTCGAAAAA GGGA ATG TCCC AGCGCTCCTGCATCT TERM 667 1142694 - 1142652 - G 100 -19.9 -3.53012 | gap 1, opp_overlap 1142646 CTTTGCCCCGTCAAA TGCGCAGCCGCCGGCTGCCG CTCC CGGCATC-GGCGGCTGCGAA CAACCCTTCTTTCGC Smed_6223 1144384 - 1142843 - | nitrogenase molybdenum-iron protein beta chain Smed_6224 1145977 - 1144475 - | nitrogenase molybdenum-iron protein alpha chain nifH 1146970 - 1146077 - | nitrogenase reductase Smed_6226 1147394 - 1146993 - | hypothetical protein TERM 668 1147473 - 1147433 - H 70 -3.8 -4.57837 | gap 1, opp_overlap 1147421, overlap 1147421 1147419 1147434 AGAGCGGCCCAAAAA CCGGGCGGCTGATGTCGCG ATCT CGCTCCAGGAGCCAC-CGG ACCCGCCTGCTCGAG Smed_6228 1149181 - 1150068 + | electron transfer flavoprotein alpha/beta-subunit Smed_6229 1150049 - 1151161 + | electron transfer flavoprotein alpha/beta-subunit Smed_6230 1151173 - 1152480 + | FAD dependent oxidoreductase Smed_6231 1152493 - 1152789 + | FixX ferredoxin-like protein TERM 669 1154592 - 1154578 - g 78 -3.4 -5.02074 | opp_overlap 1154581 GCATCCTCGAAAAAA CGCCCC GGC AGGTCG GGTATGCTATACGTC Smed_6232 1153011 - 1154636 + | transcriptional regulator NifA TERM 670 1156260 - 1156283 + G 70 -10.3 -3.59979 | gap 1, opp_overlap 1156249 TACATCGAGAGTGCG CTCGGC-GCG CTCTA CGCCGCCGAG TTTGGCATCGAACCA Smed_6233 1154850 - 1156322 + | nitrogenase cofactor biosynthesis protein NifB Smed_6234 1156354 - 1156548 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Smed_6235 1156737 - 1156943 + | NifT/FixU family protein TERM 671 1158805 - 1158784 - f 75 -10.1 -3.65714 | gap 1 AAAGTATACCTGAAA CCGC-CGGGC TTT GCCCGCGCAG ATATCGCGATTCGCC TERM 672 1159205 - 1159237 + F 85 -14.9 -3.08813 | CTTCGGCGCAGCCGC GCTCCAAGGGGTTGC ATC GCAACCGCTTGGACC TATATTGCAGTGCAA Smed_6237 1159355 - 1159582 + | XRE family transcriptional regulator Smed_6239 1160267 - 1161385 + | transposase IS116/IS110/IS902 family protein Smed_6240 1162617 - 1161490 - | integrase catalytic region Smed_6241 1162877 - 1162611 - | transposase IS3/IS911 family protein Smed_6244 1164850 - 1164395 - | transposase IS3/IS911 family protein Smed_6245 1166677 - 1165205 - | succinic semialdehyde dehydrogenase TERM 673 1165570 - 1165560 - G 74 -2.4 -4.85782 | overlap 1165556 GGCTCGAAAAACAAA CCGC CCC GCGC ATTGCCGCCCAGAAC TERM 674 1166122 - 1166152 + g 73 -8.3 -4.07687 | gap 2, opp_overlap 1166119 1166122 CAGGCTTCGAAACCA CTGCGCAGCCTGCGG CAG CGGCAGGC-GC-CAG TTTTCGGGCGAGCAT Smed_6246 1167836 - 1166757 - | ABC transporter related TERM 675 1167159 - 1167135 - G 71 -8.5 -3.85698 | opp_overlap 1167128, overlap 1167120 GCTGTCGCCGATAAA CTCGGCCAC GAACCGA GTGGCCGGG TTGGCGTATAGTTCC Smed_6247 1168633 - 1167833 - | binding-protein-dependent transport systems inner membrane component TERM 676 1168352 - 1168337 - G 74 -9 -3.90744 | CGCTTCCCGAAACAA GAACCG CCCG CGGTTC AGACCGAAAGAAGTG Smed_6248 1169510 - 1168635 - | binding-protein-dependent transport systems inner membrane component Smed_6249 1170613 - 1169603 - | extracellular solute-binding protein Smed_6250 1170977 - 1170651 - | NIPSNAP family protein Smed_6251 1172446 - 1170983 - | aldehyde dehydrogenase TERM 677 1171772 - 1171749 - G 72 -13.8 -2.79133 | opp_overlap 1171742 GAATTGCGGACTATA TGGCGCGCCG TCTC CGGCCCGCCA GTGAAGGCTATGTGA Smed_6252 1173492 - 1172452 - | luciferase family protein TERM 678 1172580 - 1172627 + g 84 -16.4 -3.06796 | gap 1, overlap 1172592 CCTCGTAGCTCTTGA TGCGG-GCGATGACCTCGTCGGC TGC GCCGACGACGTTGTTGCGTCGCA TTGCCTCGCCTGAGA TERM 679 1172592 - 1172614 + g 84 -13.4 -3.68341 | overlap 1172580 TGATGCGGGCGATGA CCTCGTCGGC TGC GCCGACGACG TTGTTGCGTCGCATT Smed_6253 1174424 - 1173489 - | flavin reductase domain-containing protein TERM 680 1173818 - 1173789 - G 74 -13.5 -2.87344 | CAGTTGTTCGAGATA GGCGGCGAGCGTG CGCG CAGGATCGCCGCC TTCGACGGTGCAATT Smed_6254 1175254 - 1174421 - | alpha/beta hydrolase fold TERM 681 1174535 - 1174551 + g 72 -12.3 -3.2632 | overlap 1174533 1174531 GCGTGCCCATCCCTT TGGCGTC ACA GACGCCA TCTGTTTGGCCATTT TERM 682 1175018 - 1175028 + g 81 -2.4 -5.15969 | GTCCCGCAACGTGCT GCCC GCT GGGA TTTTTTCGCTTGCGC Smed_6255 1175875 - 1175273 - | hypothetical protein TERM 683 1176017 - 1175994 - H 81 -3.8 -5.14563 | TTTGGTAGGAAAAAA TTTGCGATTG AGGG CGAACGCAAA CCGAGCGCGTTGATC TERM 684 1176018 - 1176040 + H 100 -10.5 -5.00616 | opp_overlap 1176018 GAGGGCGAACGCAAA CCGAGCGCG TTGAT CGCGGTCGG TTTTTTGCAGCGGAA TERM 685 1176040 - 1176018 - H 75 -10.5 -3.75629 | opp_overlap 1176018 GAGGGCGAACGCAAA CCGAGCGCG TTGAT CGCGGTCGG TTTTTTGCAGCGGAA Smed_6256 1176135 - 1176281 + | hypothetical protein Smed_6257 1177034 - 1176339 - | GntR family transcriptional regulator Smed_6258 1178786 - 1177840 - | transposase TERM 686 1178426 - 1178440 + g 90 -2.1 -5.42259 | gap 1, overlap 1178430 GGCCGGTTTTGCTCC GAG-GC ATGC GCACTC TTTTTTTGCGCGTGA Smed_6259 1179221 - 1180002 + | hypothetical protein Smed_6260 1181708 - 1180047 - | NoeB host specific nodulation protein TERM 687 1180533 - 1180547 + g 74 -10 -3.71174 | overlap 1180526 ATATGACCTCTCAAC CCAACG GTT CGTTGG TTTGCAATCTTTGTT TERM 688 1180618 - 1180605 - G 84 -2.3 -5.25656 | opp_overlap 1180605 1180605 AAAATGAGCAAAAAA GGCGT TTCC ACGAC CTTTATCTAGAATCA Smed_6261 1183118 - 1181715 - | NoeA host specific nodulation protein Smed_6262 1183338 - 1183123 - | hypothetical protein TERM 689 1183186 - 1183166 - G 77 -2.5 -5.00616 | TCCCGGCCTAAAAAA GATCTGACA GCC CATCTGATC TTATTCCAGTATCCG Smed_6263 1184086 - 1183535 - | maltose O-acetyltransferase Smed_6264 1185302 - 1184358 - | heavy metal transport/detoxification protein TERM 690 1184562 - 1184592 + g 80 -16.8 -2.66316 | opp_overlap 1184558, overlap 1184560 ACGCGACGATAGCCG TGCGAGGCCGCGGA TCG TGCGCGGCCGCGCA TCATATAGTCGAGCG Smed_6265 1186205 - 1185336 - | cytochrome c oxidase, cbb3-type, subunit III TERM 691 1185389 - 1185438 + g 93 -18 -3.2614 | gap 2, overlap 1185392 GCTCTTTCACCACCG GATCGCCGAGGCGCGGCAGCCATG CGGG CATGAC-GCCGTGCTTCGGCG-TC TTCATCTGCGCGATC TERM 692 1185392 - 1185436 + g 95 -20.8 -3.19602 | gap 1, overlap 1185389 CTTTCACCACCGGAT CGCCGAGGCGCGGCAGCCATG CGGG CATGAC-GCCGTGCTTCGGCG TCTTCATCTGCGCGA TERM 693 1185491 - 1185519 + g 70 -7.4 -4.07647 | gap 1, overlap 1185467 ACAGCCAGATCGCAT CGGCGAGGTTGGG TGCT CCCA-TCTCGCGG TTTCCTTTCGCGTCT Smed_6266 1186361 - 1186209 - | Cbb3-type cytochrome oxidase component Smed_6267 1187105 - 1186374 - | cytochrome c oxidase, cbb3-type, subunit II Smed_6268 1188738 - 1187119 - | cytochrome c oxidase, cbb3-type, subunit I TERM 694 1188321 - 1188276 - G 74 -5.9 -4.43859 | GATAACCCCAGAAAA CGAACCAGCCGAGATCACCGC CGAA GAGGCGCGCTCGACTCGTGCG CTGAACCACATAGAA Smed_6269 1189579 - 1189124 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 695 1189240 - 1189252 + g 74 -4.8 -4.64861 | TAAGTCCCCCTGGTT CCCA CCAAT TGGG TTTCTTTTCGAGCAG fixK 1190295 - 1189660 - | transcriptional regulator FixK Smed_6272 1191525 - 1190610 - | transposase IS111A/IS1328/IS1533 TERM 696 1191659 - 1191692 + r 89 -16 -3.27774 | opp_overlap 1191648 ACGATCCGACCCTCG CCGCTGAGGGAGGG CGGCAA CCCTCTCGCAGCGG TTCATCCTTCGCCTG fixJ 1192570 - 1191956 - | response regulator FixJ Smed_6274 1194167 - 1192563 - | multi-sensor signal transduction histidine kinase TERM 697 1194363 - 1194401 + r 83 -13.9 -3.33037 | gap 1, opp_overlap 1194363 1194367, overlap 1194356 1194367 GAGAACGGCACTAAA CAAACCCGGCGCAG-ACA GGAG TGTGCTGCGCCGGGTCCG TTACTCGTTTGGCGT TERM 698 1194401 - 1194363 - R 100 -18.3 -3.77206 | gap 1, opp_overlap 1194363 1194356 1194367, overlap 1194367 GAGAACGGCACTAAA CAAACCCGGCGCAG-ACA GGAG TGTGCTGCGCCGGGTCCG TTACTCGTTTGGCGT TERM 699 1194397 - 1194367 - R 100 -17.7 -4.49958 | gap 1, opp_overlap 1194367 1194363 1194356, overlap 1194363 ACGGCACTAAACAAA CCCGGCGCAG-ACA GGAG TGTGCTGCGCCGGG TCCGTTACTCGTTTG TERM 700 1194367 - 1194397 + r 87 -17.7 -2.59482 | gap 1, opp_overlap 1194363 1194367, overlap 1194363 1194356 ACGGCACTAAACAAA CCCGGCGCAG-ACA GGAG TGTGCTGCGCCGGG TCCGTTACTCGTTTG Smed_6275 1194870 - 1194427 - | pseudoazurin Smed_6276 1195675 - 1194980 - | CRP/FNR family transcriptional regulator TERM 701 1195156 - 1195168 + g 78 -4.7 -4.81083 | opp_overlap 1195156, overlap 1195157 AGATTGGAAAATCGA TGCGG ACG CCGCC TTTTTCCTGCTTGCC Smed_6277 1196734 - 1195820 - | hypothetical protein TERM 702 1196144 - 1196169 + g 70 -10.3 -3.58522 | opp_overlap 1196125 GAGCCGCTGCGGTTC CGGCTCGCGGG ACGC CTTGCGCGCCG TTTCGCGGTAGTAGT TERM 703 1196797 - 1196830 + r 100 -22.5 -3.91911 | opp_overlap 1196786 CCAACGGCGAGTCGG CCGGTCGCTCCGAAG CAGG CATCGGAGCGACCGG TTTCATTCAGGTGCC Smed_6278 1197967 - 1196837 - | nitrite reductase, copper-containing Smed_6279 1198212 - 1199423 + | NnrS family protein TERM 704 1199471 - 1199492 + T 85 -11.5 -4.07885 | opp_overlap 1199471 1199470, overlap 1199472 AAGAGCATCACGAAC TCGCCCGCT AGAC AGCGGGCGC TTTTCGAGGAGAATG TERM 705 1199472 - 1199491 + T 85 -15 -3.04517 | opp_overlap 1199471 1199470, overlap 1199471 AGAGCATCACGAACT CGCCCGCT AGAC AGCGGGCG CTTTTCGAGGAGAAT Smed_6280 1200555 - 1200262 - | hypothetical protein Smed_6281 1201090 - 1200560 - | hypothetical protein TERM 706 1200737 - 1200692 - G 78 -11.8 -3.70811 | gap 1, overlap 1200685 1200694 GGAGAGAAGCGCAAA CAGCACCTCGCCCGGCTGCAG CCGCT CTGCAGCCGCGAG-GATGCGG ACCATGGGCTCCGGG TERM 707 1200735 - 1200694 - G 76 -13 -3.43081 | gap 1, overlap 1200685 1200692 AGAGAAGCGCAAACA GCACCTCGCCCGGCTGCAG CCGCT CTGCAGCCGCGAG-GATGC GGACCATGGGCTCCG Smed_6282 1202452 - 1201094 - | hypothetical protein TERM 708 1201512 - 1201483 - G 71 -13.5 -2.66787 | gap 1, overlap 1201474 1201472 1201485 CGAAGAGGTAGACGA GAGCCGCGGC-GCC TTC GCCTGCCGCGGCCC GTGTGGCTGGCAGGG TERM 709 1201510 - 1201485 - G 70 -12.5 -2.87294 | gap 1, overlap 1201474 1201472 1201483 AAGAGGTAGACGAGA GCCGCGGC-GCC TTC GCCTGCCGCGGC CCGTGTGGCTGGCAG Smed_6283 1202812 - 1202495 - | hypothetical protein Smed_6284 1203202 - 1203056 - | hypothetical protein TERM 710 1203632 - 1203605 - g 73 -8.4 -4.07568 | overlap 1203607 GCTCTTGTCGCAAAA TATGGCGAGGCA CGTC TGCCCCGCTACA CAAGCTATCCGACGG Smed_6285 1203581 - 1204933 + | coproporphyrinogen III oxidase TERM 711 1204992 - 1204954 - T 93 -17.6 -3.36492 | gap 1, opp_overlap 1204960, overlap 1204959 1204960 GCCTTAAGCTGAGAA CAGAAGGGCCCGGCATG TACGCG CATGCCGGGC-CTTCCG GTATCGCGGCCTGCC TERM 712 1204988 - 1204959 - T 95 -15 -3.76226 | opp_overlap 1204960, overlap 1204954 1204960 AAGCTGAGAACAGAA GGGCCCGGCATG TACGCG CATGCCGGGCCT TCCGGTATCGCGGCC TERM 713 1204987 - 1204960 - T 100 -18.5 -2.85013 | opp_overlap 1204960, overlap 1204959 1204954 AGCTGAGAACAGAAG GGCCCGGCATG TACGCG CATGCCGGGCC TTCCGGTATCGCGGC Smed_6286 1206908 - 1205013 - | von Willebrand factor type A Smed_6287 1207731 - 1206913 - | ATPase TERM 714 1207758 - 1207793 + r 76 -11.7 -3.34192 | overlap 1207763 GAGTTCGAACTTCAA GCGGTGCGGCCGGTC ACGTGG GGCCGGCCGCTTCCC TTCATTCGGCCGGTT TERM 715 1207763 - 1207788 + r 87 -15.4 -3.23899 | overlap 1207758 CGAACTTCAAGCGGT GCGGCCGGTC ACGTGG GGCCGGCCGC TTCCCTTCATTCGGC Smed_6288 1209141 - 1207795 - | nitric-oxide reductase Smed_6289 1209618 - 1209166 - | cytochrome c class I Smed_6290 1210072 - 1209782 - | hypothetical protein Smed_6291 1210629 - 1210078 - | cytochrome c oxidase subunit III TERM 716 1210403 - 1210449 + g 84 -16 -3.0806 | overlap 1210445 1210446 TTACCTGCCGCAACC GCCGCCTGCCAGC-CGCTCGTC AGCAG GACGAGCGTGTTGGAAG-CGGC TATTGCCGGTTTGAG TERM 717 1210845 - 1210888 + G 72 -12.3 -3.34344 | gap 1, opp_overlap 1210839, overlap 1210849 1210851 TGCAACGGACTGGAA CGGCCGCCGCCGTGCTGGCG TCTCT CGCCTGCGCCGCGGTG-CTG TTCATTGAACGCTGA TERM 718 1210849 - 1210885 + G 74 -15 -2.54098 | opp_overlap 1210839, overlap 1210845 1210851 ACGGACTGGAACGGC CGCCGCCGTGCTGGCG TCTCT CGCCTGCGCCGCGGTG CTGTTCATTGAACGC TERM 719 1210851 - 1210883 + G 72 -14 -2.80699 | opp_overlap 1210839, overlap 1210849 1210845 GGACTGGAACGGCCG CCGCCGTGCTGGCG TCTCT CGCCTGCGCCGCGG TGCTGTTCATTGAAC Smed_6292 1210748 - 1210903 + | hypothetical protein Smed_6293 1210920 - 1211318 + | hypothetical protein TERM 720 1211752 - 1211762 + G 74 -2.4 -4.87626 | overlap 1211735 1211733 1211750 GCTGATCCTCTTCGG CGGC TTT GCCC TTTTTGCTCTTGGGA Smed_6294 1211330 - 1212016 + | NnrU family protein Smed_6295 1212840 - 1212235 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Smed_6296 1214345 - 1212837 - | UbiD family decarboxylase TERM 721 1214563 - 1214549 - g 72 -7.8 -4.11394 | AGCTCATGTTCAAAA GCCTGC TCA ACAGGC ATCCGGCGCTCTTCG TERM 722 1214749 - 1214775 + G 74 -10 -3.79906 | CTCCTCACGCTTCTC GAGGGCCGCTGC GAC GCGGACGCCCTC TTCTTCTCGCGGTCG Smed_6297 1214464 - 1214970 + | hypothetical protein Smed_6298 1214961 - 1215938 + | peptidase U32 Smed_6300 1216874 - 1217320 + | hypothetical protein Smed_6301 1217692 - 1217327 - | hypothetical protein TERM 723 1217727 - 1217710 - H 95 -6.9 -5.45652 | overlap 1217722 1217723 AGTCCTAACAAAAAA GGCGACC CGAA AGCCGCC CTCCGCACTTACCGC TERM 724 1218579 - 1218593 + G 91 -2.8 -5.41143 | CCCGACTTCGATACG CAGG CCCAGAA CCTG TTTTTTTACGCCCTC Smed_6302 1217802 - 1219088 + | hypothetical protein Smed_6303 1219617 - 1219081 - | hypothetical protein Smed_6304 1220204 - 1219620 - | hypothetical protein Smed_6305 1220797 - 1220201 - | hypothetical protein Smed_6306 1221149 - 1220931 - | hypothetical protein Smed_6307 1222498 - 1221206 - | hypothetical protein TERM 725 1221397 - 1221376 - G 77 -2.1 -4.96848 | opp_overlap 1221394, overlap 1221377 TCGGGCAGAGAAAAA GGCCAAGCC GGAT GACCCGGCG CCAGTCGGCCGGGAG TERM 726 1222162 - 1222146 - G 72 -4.4 -4.65168 | gap 1, overlap 1222148 AGCACATCTGAAAAA CG-CGGA TCGG TCCGTCG GCGATAGACGAGTAT Smed_6308 1223274 - 1222543 - | GntR family transcriptional regulator Smed_6309 1224350 - 1223337 - | alcohol dehydrogenase TERM 727 1223886 - 1223858 - G 74 -12.4 -3.44229 | overlap 1223859 AGCCCATGACGAGAA CCGGTTCGCCGT CAGGC ACGGCGAGCCGA CGCACGGCGTGCAAC TERM 728 1223885 - 1223859 - G 71 -13.7 -2.66216 | overlap 1223858 GCCCATGACGAGAAC CGGTTCGCCGT CAGGC ACGGCGAGCCG ACGCACGGCGTGCAA Smed_6310 1225682 - 1224354 - | histidinol dehydrogenase Smed_6311 1226522 - 1225722 - | binding-protein-dependent transport systems inner membrane component Smed_6312 1227463 - 1226519 - | binding-protein-dependent transport systems inner membrane component TERM 729 1227522 - 1227490 - R 88 -14.8 -3.54475 | overlap 1227491 TGTTTCACGAGAGAA GGCTGCCCGCCGCA GGGGG TGCGGCGGGCAGAT AAGGCATCAGCCCTG TERM 730 1227521 - 1227491 - R 100 -18.3 -2.72471 | overlap 1227490 GTTTCACGAGAGAAG GCTGCCCGCCGCA GGGGG TGCGGCGGGCAGA TAAGGCATCAGCCCT Smed_6313 1228644 - 1227529 - | ABC transporter, periplasmic solute-binding protein Smed_6314 1229811 - 1228678 - | spermidine/putrescine ABC transporter ATPase subunit Smed_6315 1230882 - 1230115 - | short-chain dehydrogenase/reductase SDR TERM 731 1231997 - 1231964 - g 71 -13.1 -3.07816 | gap 1, opp_overlap 1231962 1231965 CGCGCACGGACGCAA GCGGCCTGGCCGGAGC GCT GCTCCGG-CAGGGCGT AATTGTCAAACCCTG TERM 732 1231965 - 1231996 + G 83 -16.6 -2.82742 | gap 1, opp_overlap 1231964, overlap 1231962 GCGCACGGACGCAAG CGGCCTGGCCGGAGC GCT GCTCCGG-CAGGGCG TAATTGTCAAACCCT Smed_6316 1231003 - 1232115 + | histidinol-phosphate aminotransferase Smed_6317 1233588 - 1232158 - | hypothetical protein TERM 733 1232716 - 1232692 - G 71 -8.5 -3.91798 | opp_overlap 1232715, overlap 1232705 GAAGCGGGAATGAAA CGGGGGACTAA AGC TCAGCCCGCCG ATCTGCCGCGGCTGC Smed_6318 1233716 - 1234606 + | LysR family transcriptional regulator TERM 734 1234659 - 1234629 - T 85 -15.5 -3.16177 | gap 1, opp_overlap 1234634, overlap 1234631 1234634 ACGGTAGACACCTAA CAGAACGCGGACGC CGAA GCGCCCGCGTTC-G CTTCGATTAACGGCG TERM 735 1234658 - 1234631 - T 100 -19.2 -3.14125 | opp_overlap 1234634, overlap 1234629 1234634 GGTAGACACCTAACA GAACGCGGACGC CGAA GCGCCCGCGTTC GCTTCGATTAACGGC TERM 736 1234655 - 1234634 - T 95 -15.1 -3.70848 | opp_overlap 1234634, overlap 1234631 1234629 AGACACCTAACAGAA CGCGGACGC CGAA GCGCCCGCG TTCGCTTCGATTAAC TERM 737 1234634 - 1234655 + T 79 -12.9 -3.20991 | opp_overlap 1234634 1234631 1234629 AGACACCTAACAGAA CGCGGACGC CGAA GCGCCCGCG TTCGCTTCGATTAAC Smed_6319 1235115 - 1234666 - | hypothetical protein TERM 738 1235504 - 1235540 + G 73 -6.6 -4.25104 | gap 1, overlap 1235506 GACGGCCTTACCGTC TG-CCGGCAGTTGCG CACGACAA CGGAGCTGCCGGTCA TTTTCCTGACGGCGA Smed_6320 1235306 - 1236025 + | two component transcriptional regulator Smed_6321 1236025 - 1236603 + | hypothetical protein Smed_6322 1236630 - 1237460 + | histidine kinase Smed_6323 1237675 - 1238067 + | cytochrome c class I Smed_6324 1238145 - 1238615 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 739 1241071 - 1241058 - g 71 -9.5 -3.72576 | GGGCCGCGGAGCAAA CGCCG ACTG CGGCG GCCGGGCTTAAGGTG Smed_6326 1240871 - 1242181 + | putative L-sorbosone dehydrogenase Smed_6327 1243123 - 1242248 - | LysR family transcriptional regulator TERM 740 1242957 - 1242930 - G 86 -12.8 -4.07568 | opp_overlap 1242930 1242932 1242934 TTGCTTCGTTCAAAA TAGAGCTGACCG GCCT CGGTGAGCTCTA TCTTGCGCGTCGTGC TERM 741 1242930 - 1242957 + g 71 -12.8 -3.04792 | opp_overlap 1242930, overlap 1242932 1242934 TTGCTTCGTTCAAAA TAGAGCTGACCG GCCT CGGTGAGCTCTA TCTTGCGCGTCGTGC Smed_6328 1243208 - 1244299 + | NADH:flavin oxidoreductase/NADH oxidase SEQUENCE gi|150378263|ref|NC_009622.1| Sinorhizobium medicae WSM419 plasmid pSMED03, complete sequence (length 219313) TERM 1 795 - 776 - g 76 -9.2 -4.06055 | opp_overlap 790 ACGGGCGAAAGGAAA CGCCTACC AGGT GGTCGGCG CCTTCAAAGCCGATT Smed_6330 297 - 965 + | hypothetical protein Smed_6331 1503 - 1324 - | hypothetical protein TERM 2 2447 - 2433 - g 78 -2.8 -5.00616 | opp_overlap 2421, overlap 2435 GCTTGGTCGAAAAAA TCGAAC AGT GTTCTA GGCAAAAGGTTTTGT Smed_6332 1637 - 2701 + | glycoside hydrolase family protein Smed_6333 2698 - 3741 + | hypothetical protein Smed_6334 3862 - 4248 + | hypothetical protein Smed_6335 4381 - 5304 + | homocysteine S-methyltransferase TERM 3 6033 - 6016 - f 71 -12.7 -2.53876 | GCTCATTCCAAGCGA CAGCCCC TGTT GGGGCTG CAAGCGTCGGTTCGG TERM 4 6372 - 6392 + G 81 -6.7 -4.68103 | GGAGGTCCGTGCTCT GCCGCCGTC TTC GACATCGGC TTTTCTTCCGGTTCA Smed_6338 6172 - 6639 + | transposase IS3/IS911 family protein TERM 5 6731 - 6746 + G 72 -2.5 -4.78149 | overlap 6723 ACGATGGCGCTCGAT CCGTT TGCTCC AGCGG TTTTTGCCTTCTGCA Smed_6339 6620 - 6973 + | IS66 Orf2 family protein TERM 6 8102 - 8089 - g 91 -9.5 -4.59993 | opp_overlap 8094 8101, overlap 8091 AAAGCCAGAAAGAAA GGCGG CGGT CCGCC CGAGCAGGCGCTCCG Smed_6340 7027 - 8619 + | transposase IS66 Smed_6341 10486 - 8597 - | putative PAS/PAC sensor protein TERM 7 9232 - 9242 + g 74 -5.4 -4.62783 | overlap 9231 TCGCGATCTGGGTGC TCTC GAA GAGA TTTTTGAGATCGCTG TERM 8 9983 - 9995 + g 74 -5.5 -4.4017 | opp_overlap 9978, overlap 9977 AGTCGAGAAGTGCGG TGTCG CCG CGGCA TTTTCTCGCCATTGG Smed_6342 11547 - 10537 - | CheB methylesterase Smed_6343 11827 - 11534 - | hypothetical protein TERM 9 12127 - 12143 + r 77 -12.3 -3.4878 | overlap 12124 TAGTTGTCATGGCCC TGCCGCT CGA AGCGGCA TTGGTTCTCCTGTGG Smed_6344 12594 - 12118 - | putative reverse transcriptase TERM 10 12866 - 12894 + r 70 -11.7 -2.82987 | opp_overlap 12864 12863 TCTCTTCGAGAACCC GGCAGTAAGGATC GAC GAGCCTTACCGCC TCTGATCGCTCTTCG Smed_6345 13722 - 13165 - | transposase mutator type TERM 11 13975 - 13944 - H 85 -10.2 -4.26903 | opp_overlap 13943 13942 13973 TTTATCCCAGGAAAA GCAGCGCTCC GGAAGATGGAAT GGAGCGCTGC AGTTGTCCGACACGT TERM 12 14309 - 14319 + G 78 -6.8 -4.57073 | overlap 14294 14293 TGGGGCCTCACAGGC CCGA TCT TCGG TTTTTCCCAGACGTG Smed_6346 14195 - 14617 + | hypothetical protein TERM 13 14759 - 14726 - f 86 -8.9 -4.71426 | opp_overlap 14725 GCGGCATCAAGAAAA GCAGCGCTCCC GCCTAACCGAAA AGGAGCGCTGC AGTTGTCCGACATGT Smed_6347 15134 - 15307 + | hypothetical protein TERM 14 15355 - 15319 - T 100 -9.3 -4.91712 | overlap 15320 15321 15323 GTGAAGGCATAAAAA GTGAGTGCCCGCGCG AGGGGAA CGGGCGGGCACTCTG AACAGGTTGGGGGAC TERM 15 15354 - 15320 - T 81 -12.8 -3.54304 | overlap 15319 15321 15323 TGAAGGCATAAAAAG TGAGTGCCCGCGCG AGGGGAA CGGGCGGGCACTCT GAACAGGTTGGGGGA TERM 16 15353 - 15321 - T 86 -16.3 -2.71859 | overlap 15320 15319 15323 GAAGGCATAAAAAGT GAGTGCCCGCGCG AGGGGAA CGGGCGGGCACTC TGAACAGGTTGGGGG TERM 17 15351 - 15323 - T 74 -13.1 -2.89069 | overlap 15321 15320 15319 AGGCATAAAAAGTGA GTGCCCGCGCG AGGGGAA CGGGCGGGCAC TCTGAACAGGTTGGG TERM 18 15447 - 15463 + T 91 -7.2 -5.32608 | CTTCAGCAATTATTT GCGGGG CTTCA CCTCGC TTTTTTGCGTTTTTT Smed_6348 16176 - 15715 - | MgtC/SapB transporter Smed_6350 17029 - 16538 - | hypothetical protein Smed_6351 17385 - 19199 + | Pyrrolo-quinoline quinone Smed_6352 19180 - 20001 + | extracellular solute-binding protein Smed_6353 19998 - 20555 + | cytochrome c class I TERM 19 20644 - 20676 + G 83 -14.2 -3.42503 | gap 1 TCCTCGCTCGATCCG CAGGGTCCGCAAGCG GACA CGCTAGCG-ACCCTG TTCTGGGTGTTCACC TERM 20 20740 - 20776 + G 70 -9.9 -3.64703 | overlap 20741 GCGGCGCTGCTTCTG TCGCTCCGGCGCGATCG CGC CGCTCGAGCCGGGCCGC TTTCGCTCGAGCCGC TERM 21 20741 - 20775 + G 72 -13.4 -2.78679 | overlap 20740 CGGCGCTGCTTCTGT CGCTCCGGCGCGATCG CGC CGCTCGAGCCGGGCCG CTTTCGCTCGAGCCG TERM 22 21280 - 21268 - g 76 -10.5 -3.87354 | GAAAGCCAGATCAAA GCGGC GGC GCCGC CCGACGACCCCGTAC Smed_6354 20563 - 21567 + | cytochrome c oxidase subunit II TERM 23 23094 - 23066 - g 93 -18.2 -3.28712 | gap 1 CGTCTTCCTTTACAA CGTGGCCGCCAGC GCCC GC-GGCGGCCACG TTGCGGGTGACAACC Smed_6355 21564 - 23471 + | cytochrome c oxidase subunit I type Smed_6356 23472 - 24068 + | putative cytochrome c oxidase subunit III protein Smed_6357 24065 - 24415 + | hypothetical protein Smed_6358 24412 - 25398 + | hypothetical protein TERM 24 27063 - 27042 - T 75 -10.1 -3.65714 | gap 1 AAAGTATACCTGAAA CCGC-CGGGC TTT GCCCGCGCAG ATATCGCGATTCGCC TERM 25 27341 - 27373 + T 72 -6.2 -4.2558 | overlap 27330 27329 27353 GAACGTTCAGACGCT GGACCTCTTCATTC GTCGA GAGAGAAGGGGCCC TTTTCGTCGCCGGTA Smed_6361 27522 - 27391 - | hypothetical protein TERM 26 27602 - 27630 + H 70 -12.3 -2.71011 | opp_overlap 27599 27600 TTGTCGCGATAACGG GGCAGGGCGAGCC TTA GGCGCGCTCTACC TGCTTGACCGAGGCT Smed_6362 27690 - 28001 + | hypothetical protein Smed_6363 28588 - 28025 - | yecA family protein TERM 27 28261 - 28294 + g 72 -7.3 -4.24002 | TGGCATCAAAGGTCT GATCATCGATCCTGG TGAA CCTGGGCCGGTGGTC TTTTGGCGTTTCGGC TERM 28 28298 - 28328 + g 70 -10.4 -3.65812 | overlap 28299 GGGCCGGTGGTCTTT TGGCGTTTCGGCGA GGC TCGCCGAGATGCGG TTATATTCCGCAACG Smed_6364 30159 - 28585 - | transposase IS66 TERM 29 29794 - 29751 - G 74 -12.7 -3.31144 | gap 3, overlap 29754 GTTTGACCCGGACAA CAGCCGGCAC-GATGTCGAGCG CCT CGCT-GACATCCGTGCCGA-TG CAATGCAGGTCGAAC TERM 30 29792 - 29754 - G 76 -15.5 -2.53271 | overlap 29751 TGACCCGGACAACAG CCGGCAC-GATGTCGAGCG CCT CGCT-GACATCCGTGCCGA TGCAATGCAGGTCGA Smed_6365 30564 - 30208 - | IS66 Orf2 family protein Smed_6366 31043 - 30561 - | transposase IS3/IS911 family protein TERM 31 31626 - 31609 - H 78 -8.3 -4.45485 | ACCAGATGGATAAAA CCGTGCC TCCT GGCGCGG CGATCCTGCTCGACT TERM 32 32045 - 32027 - H 71 -10.2 -3.53224 | opp_overlap 32017 GACGGGGCGGGGAAA CTCGCCTC TAT GAGGCGTG GATCCGCAAATCTAA Smed_6369 32353 - 33642 + | polysaccharide biosynthesis protein TERM 33 33746 - 33712 - T 100 -15.1 -4.84311 | gap 1, opp_overlap 33711 33710 GGGCAGACAAGAAAA GCAGCGCTCCT-GGCA CAAC TGACAAGGAGCGCTGC AGTTGGTCCACTTAG Smed_6370 35791 - 33890 - | K potassium transporter TERM 34 35170 - 35154 - G 85 -3.6 -5.26316 | GCATTCCATAAAAAA CCGATC GCATT GAGCGG GTTAAAAGCCGAAAG Smed_6371 36953 - 36540 - | MucR family transcriptional regulator TERM 35 38746 - 38757 + H 76 -7.2 -4.42765 | overlap 38714 GCAGGAATGCAGCGG CGCC GATC GGCG TTTCGTTTTTTCACG TERM 36 39193 - 39179 - g 77 -12.8 -3.54424 | overlap 39164 39163 CGGCACTCCTCGAAA GCGCGC CAA GCGCGC TCCCGCCCAGACGAT Smed_6374 38838 - 39398 + | hypothetical protein Smed_6375 39784 - 39464 - | XRE family transcriptional regulator TERM 37 40062 - 40086 + H 72 -9.2 -3.67622 | gap 1, opp_overlap 40063, overlap 40058 40063 TCGGAAGAGAAAAAA AGGGCCGTCGG AAAA CCG-CGGCCCA TTAGTTTTGAAGGTA TERM 38 40063 - 40085 + H 73 -12.7 -2.80091 | gap 1, opp_overlap 40063, overlap 40062 40058 CGGAAGAGAAAAAAA GGGCCGTCGG AAAA CCG-CGGCCC ATTAGTTTTGAAGGT TERM 39 40085 - 40063 - H 100 -12.7 -5.80817 | gap 1, opp_overlap 40063 40062 40058 CGGAAGAGAAAAAAA GGGCCGTCGG AAAA CCG-CGGCCC ATTAGTTTTGAAGGT Smed_6376 40123 - 40425 + | hypothetical protein TERM 40 41022 - 41032 + T 87 -8.2 -4.87133 | GTAAACGGGAGTGGG GCGG CTG CCGC TTTTATTTGCGGGCT TERM 41 41067 - 41081 + T 78 -11.4 -3.77831 | overlap 41075 GCAAAGGTGGAGTGC GCCGCT TTC AGCGGC TTTCGCTGTTGCTAG Smed_6378 41571 - 41074 - | XRE family transcriptional regulator TERM 42 41394 - 41420 + g 72 -3.7 -4.63218 | gap 2, opp_overlap 41382 AATGCGCTAAATCGG CGCGGGATATGCC TTT GGC-T-TCGCGCG TTTTCTTGAGCCAGG TERM 43 42130 - 42090 - R 77 -11.9 -3.5394 | AAATGCTCCCGGAAA TGTTCCCCATCCCAACCGT CGG ACGGCTGCGATAAGGAGCA ACATACACGCCGAGG Smed_6379 42638 - 42192 - | hypothetical protein Smed_6380 43335 - 42622 - | hypothetical protein Smed_6381 44025 - 44426 + | mobilisation protein Smed_6382 44430 - 46922 + | hypothetical protein Smed_6383 46929 - 47138 + | hypothetical protein TERM 44 47626 - 47638 + G 74 -4.7 -4.57569 | opp_overlap 47626 47627, overlap 47627 GCATGCTGATCCAAA TGGGC GTT GCCCC TTTTTCAGGGCGTGC Smed_6384 47238 - 47681 + | hypothetical protein Smed_6386 48721 - 49623 + | beta-lactamase domain-containing protein TERM 45 51299 - 51317 + G 81 -10.2 -4.20516 | TCCAGTATCCGGTAC GGGTCGAG ACG CCCGACCC TTTGTTCGCTCGCGC Smed_6390 51262 - 52086 + | catalase TERM 46 52164 - 52131 - f 74 -8.1 -4.10657 | gap 1, overlap 52121 GGACACCGTCGAAAA TTGGTGACGGGCACGT TGA AC-CGCCCGTCGCCGA CCGGCTTGGCCTGAC Smed_6392 52465 - 53127 + | hypothetical protein Smed_6393 53195 - 53803 + | hypothetical protein TERM 47 53891 - 53907 + T 72 -5.8 -4.55826 | GTTGAGCATCTCTGC CTTGGG CGCCA CCCAGG TTTTCATCTTTTCAA Smed_6394 55345 - 53870 - | hypothetical protein Smed_6396 58760 - 56661 - | TRAG family protein Smed_6397 59785 - 58757 - | P-type DNA transfer ATPase VirB11 TERM 48 59372 - 59341 - G 83 -15.8 -3.14564 | opp_overlap 59341 TCAGCTCGCGATCAA GGTCGCTGAGGCCG CCGA CGGCCACAGAGACC TTATCGAGCGAACCG TERM 49 59341 - 59372 + g 84 -15.8 -3.28712 | opp_overlap 59341 TCAGCTCGCGATCAA GGTCGCTGAGGCCG CCGA CGGCCACAGAGACC TTATCGAGCGAACCG Smed_6398 60977 - 59766 - | conjugation TrbI family protein TERM 50 60871 - 60850 - G 72 -4.3 -4.5442 | overlap 60852 60865 GTGGCAAGCACAAAA TAGGCGGCG ACAG CACCCCCCA GGAGCAGGGCGGCCA Smed_6399 61786 - 60977 - | P-type conjugative transfer protein VirB9 Smed_6400 62478 - 61783 - | VirB8 family protein TERM 51 61976 - 61964 - G 74 -4.7 -4.56597 | overlap 61968 TCGGTCGTGGAAAAA CGGAC CAA GGCCG TGCTCGCATTGGAGA TERM 52 62373 - 62400 + g 83 -5.4 -5.04385 | opp_overlap 62374, overlap 62374 AAATCATTGTGACGA ACCATGCGAGCG AGCG CGATCGCTTGGC TTTTTTGACGATCTC Smed_6401 63532 - 62504 - | TrbL/VirB6 plasmid conjugal transfer protein TERM 53 62788 - 62774 - G 82 -11.4 -4.06384 | GTTGAAGAGGACAAA TGCGCC TGC GGCGCA CAGGAGCAGGAAAGC TERM 54 63112 - 63099 - G 82 -3.1 -5.2112 | gap 1, overlap 63086 AACATGATCAAAAAA CCGATC ATG GA-CGG CAGCACGGCAAAATA Smed_6402 63775 - 63548 - | hypothetical protein Smed_6403 64466 - 63765 - | conjugal transfer protein Smed_6404 65566 - 64478 - | lytic transglycosylase catalytic TERM 55 64508 - 64538 + g 76 -6.9 -4.53303 | gap 2 CATCAGATCTACGTT GGCTTCGCGCTCCCG CTT CTGGA-CGC-AAGCC TTTTCTGTCGGGCTC Smed_6405 68022 - 65563 - | type IV secretion/conjugal transfer ATPase TERM 56 67329 - 67301 - G 72 -4.4 -4.63932 | opp_overlap 67302, overlap 67302 GACGTTCCAACAAAA TTGCGAATGCCC ATGCG GGGCAGGCGCAT CTTGCGCGGCACACC Smed_6406 68324 - 68025 - | type IV secretory pathway VirB3 family protein Smed_6407 68666 - 68328 - | VIRB2 type IV secretion fmaily protein Smed_6408 69439 - 68678 - | lytic transglycosylase catalytic TERM 57 68870 - 68885 + g 70 -11.8 -3.1552 | overlap 68868 GACTGTTTCCTGGAA CGGCGG GATG CCGCCG TGTTGGTAGATCCGC TERM 58 69706 - 69694 - H 75 -5.5 -4.56914 | TGATCGAAACGAAAA CCAAC TAA GCTGG TGAAGGTGTCGCATC TERM 59 70340 - 70318 - g 83 -5.4 -5.00616 | opp_overlap 70324 70331, overlap 70320 70322 CCGCCTCGCAAAAAA GCCAGACGGG ACT CCCGTTCGTC CGGATCTCTCCAAAG Smed_6409 69812 - 70420 + | hypothetical protein Smed_6410 70417 - 70953 + | succinoglycan biosynthesis protein ExoI-like protein Smed_6411 70950 - 71651 + | nuclease Smed_6412 71652 - 72050 + | hypothetical protein Smed_6413 72052 - 72648 + | hypothetical protein Smed_6414 72669 - 73085 + | hypothetical protein TERM 60 73086 - 73118 + T 87 -14.2 -3.36492 | opp_overlap 73090 73093, overlap 73093 GCCAAAATCAATTAA GAAAGAAGCCGCCC AACAA GGGCGGCTTTATTC TTCTGCCCTTCACGC TERM 61 73114 - 73090 - T 90 -11.4 -4.37247 | opp_overlap 73086 73093, overlap 73093 AAATCAATTAAGAAA GAAGCCGCCC AACAA GGGCGGCTTT ATTCTTCTGCCCTTC TERM 62 73111 - 73093 - T 93 -13.1 -4.27694 | opp_overlap 73093 73086, overlap 73090 TCAATTAAGAAAGAA GCCGCCC AACAA GGGCGGC TTTATTCTTCTGCCC TERM 63 73093 - 73111 + T 100 -13.1 -4.51812 | opp_overlap 73090 73093, overlap 73086 TCAATTAAGAAAGAA GCCGCCC AACAA GGGCGGC TTTATTCTTCTGCCC Smed_6415 73515 - 73168 - | hypothetical protein TERM 64 73775 - 73787 + r 80 -10.5 -3.96483 | opp_overlap 73774 73773 73771 TGAGTTGAAAATATG CGGCC TTC GGCCG TTATTTCGGTGCAAT Smed_6416 74157 - 73981 - | hypothetical protein Smed_6417 75240 - 74230 - | hypothetical protein Smed_6418 76843 - 75230 - | putative transmembrane protein TERM 65 75474 - 75463 - G 85 -5.8 -4.98522 | AACCGTACAGAAAAA CGAC ACAG GTCG AAATGGCGACTAGAA Smed_6419 77053 - 77409 + | hypothetical protein Smed_6420 78572 - 77571 - | integrase catalytic region TERM 66 78583 - 78599 + H 81 -4.3 -5.09204 | GACATCCAAAAATCT CCAGGGC GAA GCCTTTG TTTTTATTGGCATGT Smed_6421 78912 - 79649 + | hypothetical protein Smed_6422 81045 - 79636 - | integrase catalytic region TERM 67 82666 - 82653 - R 100 -8.1 -5.37593 | opp_overlap 82653 82645 CTTTAAATGAAAAAA GGTCC TTGC GGACC TTAATTCGTTTCGGC Smed_6427 83421 - 83128 - | hypothetical protein Smed_6428 84022 - 83690 - | hypothetical protein TERM 68 83968 - 83990 + g 86 -16.2 -3.18429 | overlap 83960 GCCCCACGGTCTCGT CCGGCCGCGG CGC CCGCGGCAGG TTGATCACAATTTTG Smed_6429 85755 - 84145 - | monophenol monooxygenase Smed_6430 86211 - 85819 - | hypothetical protein Smed_6431 88188 - 86239 - | multicopper oxidase type 2 TERM 69 91381 - 91349 - H 79 -13.4 -3.05294 | gap 2, overlap 91339 CTAAACCGGCCAATA TGCCCGGGGG--CGGC GTC GCCGTTCCCCCGGGCG AAGAACCCGATAAAG Smed_6438 91437 - 92630 + | polar amino acid ABC transporter, inner membrane subunit TERM 70 92963 - 92998 + G 83 -9.6 -4.27443 | gap 1, overlap 92964 TTTTCGGCCGCTATC CGCTCGACGAGCGCTGG CGT CCTGCGCTGGTCG-GCA TTCTTTTCGTCCTGC TERM 71 92964 - 92997 + G 73 -13.1 -3.15743 | gap 1, overlap 92963 TTTCGGCCGCTATCC GCTCGACGAGCGCTGG CGT CCTGCGCTGGTCG-GC ATTCTTTTCGTCCTG Smed_6439 92635 - 93789 + | polar amino acid ABC transporter, inner membrane subunit TERM 72 93821 - 93807 - g 77 -4.2 -4.90079 | AGGGGAACAAGAAAA TGGCAA ATA CCGCCA CTACAACGAAAATGG Smed_6440 93806 - 94582 + | ABC transporter related TERM 73 94660 - 94682 + T 88 -14.2 -3.53224 | CGCTTCTAATTTGAA GGTTGGGCTG TTT TAGCCCAACC TTTGAACAGGGGATG Smed_6442 95139 - 94969 - | hypothetical protein TERM 74 96112 - 96088 - g 81 -7.7 -4.48987 | GTCCGACAATGAAAA GGCCCCGACGC ACC GCGTCTACGCC AAGTCACTGCGCGGA Smed_6445 95960 - 96244 + | hypothetical protein TERM 75 96310 - 96324 + F 93 -8.6 -4.77036 | opp_overlap 96309 96310 GAGAACCCGGCAAAG TGCTGA TAT TCAGCA TTTTTCCTGCTACGG Smed_6446 96364 - 96504 + | hypothetical protein TERM 76 97042 - 97062 + G 74 -5.4 -4.57569 | gap 1, overlap 97029 97046 TACGGCTGACGTCGG CGGC-CCTG CTTG CAGGTGCTG TTTTTGCAGCGGTGC Smed_6447 96912 - 98021 + | calcium/proton exchanger Smed_6448 98309 - 98085 - | hypothetical protein Smed_6449 98638 - 98378 - | plasmid stabilization system protein Smed_6450 98916 - 98635 - | CopG family transcriptional regulator Smed_6451 100050 - 99230 - | hypothetical protein Smed_6452 100152 - 101174 + | transposase IS116/IS110/IS902 family protein Smed_6453 101590 - 102612 + | feruloyl esterase Smed_6456 104897 - 103878 - | 1-aminocyclopropane-1-carboxylate deaminase TERM 77 104970 - 104980 + H 72 -5.4 -4.55697 | GTGCTCTCTAATTTT GCTT TAA AAGC TTTCTTTGTCGGCAT Smed_6457 105041 - 105517 + | AsnC family transcriptional regulator Smed_6460 106307 - 106837 + | transposase IS3/IS911 family protein TERM 78 107316 - 107326 + G 73 -8.2 -3.98826 | AAGGCGTTCTTCTGG GCGG CCG CCGC TTTCTGGATTGGTGC Smed_6461 106898 - 108136 + | phage integrase family protein Smed_6462 108133 - 109065 + | phage integrase family protein Smed_6464 111258 - 110521 - | IstB ATP binding domain-containing protein TERM 79 113031 - 113006 - R 78 -9.7 -4.05788 | CGTGGCTAAAGCAAA GGCCCACGACG ATGA CATCGTAAGCC TCGGAAACGGCTTCA Smed_6467 114145 - 113402 - | 4'-phosphopantetheinyl transferase TERM 80 113774 - 113785 + g 83 -7.2 -4.66163 | CTGCTCGACATCCAG GCCG CAAT CGGC TTTTTGCGTGAGGAT Smed_6468 114942 - 114142 - | hypothetical protein Smed_6469 115956 - 115207 - | hypothetical protein TERM 81 115917 - 115905 - G 78 -3.4 -5.00884 | overlap 115909 ATTTCGGTGAAAAAA CTGA GGGAA TCAG ATCGGACCGTTCCCG TERM 82 116003 - 116022 + r 76 -2.8 -4.96848 | GAATCATTTTAACCA GTTGCG CCCCAGTC CGCAGC TTTTTCTATGCCGAC Smed_6471 118257 - 116722 - | hypothetical protein TERM 83 116853 - 116841 - G 74 -10.5 -3.75153 | GTGCGCTAAGGCAAA GCCGC AAC GCGGC AACCTGGACGCCCTC Smed_6472 144998 - 118254 - | amino acid adenylation domain-containing protein TERM 84 119576 - 119556 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 85 121188 - 121209 + g 74 -12.9 -3.32268 | overlap 121190 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 86 121190 - 121207 + g 76 -14.1 -3.22653 | overlap 121188 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 87 122846 - 122826 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCTGCATCCGCGTG TERM 88 123445 - 123417 - G 72 -2.4 -4.72272 | CGGCGTGACTAAAAA GGCGGCGT CCAGTGGTTGATC ACGCCACC ACTGCAGGAGAAGCA TERM 89 124446 - 124467 + g 74 -12.9 -3.32268 | overlap 124448 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 90 124448 - 124465 + g 76 -14.1 -3.22653 | overlap 124446 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 91 126104 - 126084 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 92 127704 - 127737 + g 82 -14.5 -3.28791 | overlap 127707 127709 CGCAGCCTCCACCCG CAGCCCCGGCAGGTC CAAT GACCCGCCGGTGTTG TTCTGCCAGGCCAGT TERM 93 127707 - 127734 + g 81 -12.6 -3.78934 | overlap 127704 127709 AGCCTCCACCCGCAG CCCCGGCAGGTC CAAT GACCCGCCGGTG TTGTTCTGCCAGGCC TERM 94 127709 - 127732 + g 79 -13.8 -3.4811 | overlap 127707 127704 CCTCCACCCGCAGCC CCGGCAGGTC CAAT GACCCGCCGG TGTTGTTCTGCCAGG TERM 95 128469 - 128420 - G 70 -10.6 -3.57406 | gap 1, opp_overlap 128462 128464, overlap 128418 GCGTCAGCAGAAAGA CGTGCTCCTCATCCGCCAGCCGG ATCAG CCGGCCG-CGGATCAGCGGCTCG CGCGCCAGATCGAAC TERM 96 128462 - 128498 + g 70 -10 -3.61715 | opp_overlap 128420 128418 128484, overlap 128464 GCCGGCCGCGGATCA GCGGCTCGCGCGCC AGATCGAAC GGCGTGCGCGCCTC TTCTTGGCACAAATC TERM 97 128531 - 128519 - G 74 -6.2 -4.39571 | GGCACAAATCCAAAA GCGC GGCTT GCGC ATCCGGCCTGTCCCG TERM 98 129317 - 129297 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 99 130917 - 130950 + g 82 -14.5 -3.28791 | overlap 130920 130922 CGCAGCCTCCACCCG CAGCCCCGGCAGGTC CAAT GACCCGCCGGTGTTG TTCTGCCAGGCCAGT TERM 100 130920 - 130947 + g 81 -12.6 -3.78934 | overlap 130917 130922 AGCCTCCACCCGCAG CCCCGGCAGGTC CAAT GACCCGCCGGTG TTGTTCTGCCAGGCC TERM 101 130922 - 130945 + g 79 -13.8 -3.4811 | overlap 130920 130917 CCTCCACCCGCAGCC CCGGCAGGTC CAAT GACCCGCCGG TGTTGTTCTGCCAGG TERM 102 131682 - 131633 - G 70 -10.6 -3.57406 | gap 1, opp_overlap 131675 131677, overlap 131631 GCGTCAGCAGAAAGA CGTGCTCCTCATCCGCCAGCCGG ATCAG CCGGCCG-CGGATCAGCGGCTCG CGCGCCAGATCGAAC TERM 103 131675 - 131711 + g 70 -10 -3.61715 | opp_overlap 131633 131631 131697, overlap 131677 GCCGGCCGCGGATCA GCGGCTCGCGCGCC AGATCGAAC GGCGTGCGCGCCTC TTCTTGGCACAAATC TERM 104 131744 - 131732 - G 74 -6.2 -4.39571 | GGCACAAATCCAAAA GCGC GGCTT GCGC ATCCGGCCTGTCCCG TERM 105 132530 - 132510 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 106 134130 - 134163 + g 82 -14.5 -3.28791 | overlap 134133 134135 CGCAGCCTCCACCCG CAGCCCCGGCAGGTC CAAT GACCCGCCGGTGTTG TTCTGCCAGGCCAGT TERM 107 134133 - 134160 + g 81 -12.6 -3.78934 | overlap 134130 134135 AGCCTCCACCCGCAG CCCCGGCAGGTC CAAT GACCCGCCGGTG TTGTTCTGCCAGGCC TERM 108 134135 - 134158 + g 79 -13.8 -3.4811 | overlap 134133 134130 CCTCCACCCGCAGCC CCGGCAGGTC CAAT GACCCGCCGG TGTTGTTCTGCCAGG TERM 109 134895 - 134846 - G 70 -10.6 -3.57406 | gap 1, opp_overlap 134888 134890, overlap 134844 GCGTCAGCAGAAAGA CGTGCTCCTCATCCGCCAGCCGG ATCAG CCGGCCG-CGGATCAGCGGCTCG CGCGCCAGATCGAAC TERM 110 134888 - 134924 + g 70 -10 -3.61715 | opp_overlap 134846 134844 134910, overlap 134890 GCCGGCCGCGGATCA GCGGCTCGCGCGCC AGATCGAAC GGCGTGCGCGCCTC TTCTTGGCACAAATC TERM 111 134957 - 134945 - G 74 -6.2 -4.39571 | GGCACAAATCCAAAA GCGC GGCTT GCGC ATCCGGCCTGTCCCG TERM 112 135743 - 135723 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 113 137364 - 137397 + g 82 -14.5 -3.28791 | overlap 137367 137369 CGCAGCCTCCACCCG CAGCCCCGGCAGGTC CAAT GACCCGCCGGTGTTG TTCTGCCAGGCCAGT TERM 114 137367 - 137394 + g 81 -12.6 -3.78934 | overlap 137364 137369 AGCCTCCACCCGCAG CCCCGGCAGGTC CAAT GACCCGCCGGTG TTGTTCTGCCAGGCC TERM 115 137369 - 137392 + g 79 -13.8 -3.4811 | overlap 137367 137364 CCTCCACCCGCAGCC CCGGCAGGTC CAAT GACCCGCCGG TGTTGTTCTGCCAGG TERM 116 138129 - 138080 - G 70 -10.6 -3.57406 | gap 1, opp_overlap 138122 138124, overlap 138078 GCGTCAGCAGAAAGA CGTGCTCCTCATCCGCCAGCCGG ATCAG CCGGCCG-CGGATCAGCGGCTCG CGCGCCAGATCGAAC TERM 117 138122 - 138158 + g 70 -10 -3.61715 | opp_overlap 138080 138078 138144, overlap 138124 GCCGGCCGCGGATCA GCGGCTCGCGCGCC AGATCGAAC GGCGTGCGCGCCTC TTCTTGGCACAAATC TERM 118 138191 - 138179 - G 74 -6.2 -4.39571 | GGCACAAATCCAAAA GCGC GGCTT GCGC ATCCGGCCTGTCCCG TERM 119 138977 - 138957 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 120 140577 - 140610 + g 82 -14.5 -3.28791 | overlap 140580 140582 CGCAGCCTCCACCCG CAGCCCCGGCAGGTC CAAT GACCCGCCGGTGTTG TTCTGCCAGGCCAGT TERM 121 140580 - 140607 + g 81 -12.6 -3.78934 | overlap 140577 140582 AGCCTCCACCCGCAG CCCCGGCAGGTC CAAT GACCCGCCGGTG TTGTTCTGCCAGGCC TERM 122 140582 - 140605 + g 79 -13.8 -3.4811 | overlap 140580 140577 CCTCCACCCGCAGCC CCGGCAGGTC CAAT GACCCGCCGG TGTTGTTCTGCCAGG TERM 123 141342 - 141293 - G 70 -10.6 -3.57406 | gap 1, opp_overlap 141335 141337, overlap 141291 GCGTCAGCAGAAAGA CGTGCTCCTCATCCGCCAGCCGG ATCAG CCGGCCG-CGGATCAGCGGCTCG CGCGCCAGATCGAAC TERM 124 141335 - 141371 + g 70 -10 -3.61715 | opp_overlap 141293 141291 141357, overlap 141337 GCCGGCCGCGGATCA GCGGCTCGCGCGCC AGATCGAAC GGCGTGCGCGCCTC TTCTTGGCACAAATC TERM 125 141404 - 141392 - G 74 -6.2 -4.39571 | GGCACAAATCCAAAA GCGC GGCTT GCGC ATCCGGCCTGTCCCG TERM 126 142190 - 142170 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 127 142726 - 142736 + g 73 -8.2 -4.05446 | overlap 142716 ATGACGCTTGCCGAT GCCG GCA CGGC TTTCTGGTTGACCAG TERM 128 143769 - 143802 + g 82 -14.5 -3.28791 | overlap 143772 143774 CGCAGCCTCCACCCG CAGCCCCGGCAGGTC CAAT GACCCGCCGGTGTTG TTCTGCCAGGCCAGT TERM 129 143772 - 143799 + g 81 -12.6 -3.78934 | overlap 143769 143774 AGCCTCCACCCGCAG CCCCGGCAGGTC CAAT GACCCGCCGGTG TTGTTCTGCCAGGCC TERM 130 143774 - 143797 + g 79 -13.8 -3.4811 | overlap 143772 143769 CCTCCACCCGCAGCC CCGGCAGGTC CAAT GACCCGCCGG TGTTGTTCTGCCAGG TERM 131 144534 - 144485 - G 70 -10.6 -3.57406 | gap 1, opp_overlap 144527 144529, overlap 144483 GCGTCAGCAGAAAGA CGTGCTCCTCATCCGCCAGCCGG ATCAG CCGGCCG-CGGATCAGCGGCTCG CGCGCCAGATCGAAC TERM 132 144527 - 144563 + g 70 -10 -3.61715 | opp_overlap 144485 144483 144549, overlap 144529 GCCGGCCGCGGATCA GCGGCTCGCGCGCC AGATCGAAC GGCGTGCGCGCCTC TTCTTGGCACAAATC TERM 133 144596 - 144584 - G 74 -6.2 -4.39571 | GGCACAAATCCAAAA GCGC GGCTT GCGC ATCCGGCCTGTCCCG Smed_6473 171742 - 144995 - | amino acid adenylation domain-containing protein TERM 134 145522 - 145502 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 135 146058 - 146068 + g 73 -8.2 -4.05446 | overlap 146048 ATGACGCTTGCCGAT GCCG GCA CGGC TTTCTGGTTGACCAG TERM 136 147119 - 147140 + g 74 -12.9 -3.32268 | overlap 147121 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 137 147121 - 147138 + g 76 -14.1 -3.22653 | overlap 147119 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 138 148777 - 148757 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 139 150389 - 150410 + g 74 -12.9 -3.32268 | overlap 150391 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 140 150391 - 150408 + g 76 -14.1 -3.22653 | overlap 150389 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 141 152047 - 152027 - G 81 -15.5 -3.00298 | CTTCGCAATCACATA GGCGACAAG CCG CTTGTCGCC CGCTGCATCCGCGTG TERM 142 152583 - 152593 + g 73 -8.2 -4.05446 | overlap 152573 ATGACGCTTGCCGAT GCCG GCA CGGC TTTCTGGTTGACCAG TERM 143 153644 - 153665 + g 74 -12.9 -3.32268 | overlap 153646 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 144 153646 - 153663 + g 76 -14.1 -3.22653 | overlap 153644 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 145 155302 - 155282 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 146 155838 - 155848 + g 73 -8.2 -4.05446 | overlap 155828 ATGACGCTTGCCGAT GCCG GCA CGGC TTTCTGGTTGACCAG TERM 147 156899 - 156920 + g 74 -12.9 -3.32268 | overlap 156901 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 148 156901 - 156918 + g 76 -14.1 -3.22653 | overlap 156899 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 149 158557 - 158537 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 150 160184 - 160205 + g 74 -12.9 -3.32268 | overlap 160186 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 151 160186 - 160203 + g 76 -14.1 -3.22653 | overlap 160184 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 152 161842 - 161822 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 153 163460 - 163481 + g 74 -12.9 -3.32268 | overlap 163462 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 154 163462 - 163479 + g 76 -14.1 -3.22653 | overlap 163460 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 155 165118 - 165098 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 156 166736 - 166757 + g 74 -12.9 -3.32268 | overlap 166738 CACGTCGCTTGTTCC CTCGCCGGC CATG GCCGGCGTG TTGTGGCGATAGTTC TERM 157 166738 - 166755 + g 76 -14.1 -3.22653 | overlap 166736 CGTCGCTTGTTCCCT CGCCGGC CATG GCCGGCG TGTTGTGGCGATAGT TERM 158 168394 - 168374 - G 81 -15.5 -3.00298 | CTTCGCAACCACATA GGCGACAAG CCG CTTGTCGCC CGCCGCATCCGCGTG TERM 159 169994 - 170027 + g 82 -14.5 -3.28791 | overlap 169997 169999 CGCAGCCTCCACCCG CAGCCCCGGCAGGTC CAAT GACCCGCCGGTGTTG TTCTGCCAGGCCAGT TERM 160 169997 - 170024 + g 81 -12.6 -3.78934 | overlap 169994 169999 AGCCTCCACCCGCAG CCCCGGCAGGTC CAAT GACCCGCCGGTG TTGTTCTGCCAGGCC TERM 161 169999 - 170022 + g 79 -13.8 -3.4811 | overlap 169997 169994 CCTCCACCCGCAGCC CCGGCAGGTC CAAT GACCCGCCGG TGTTGTTCTGCCAGG TERM 162 170759 - 170710 - G 70 -10.6 -3.57406 | gap 1, opp_overlap 170752 170754, overlap 170708 GCGTCAGCAGAAAGA CGTGCTCCTCATCCGCCAGCCGG ATCAG CCGGCCG-CGGATCAGCGGCTCG CGCGCCAGATCGAAC TERM 163 170752 - 170788 + g 70 -10 -3.61715 | opp_overlap 170710 170708 170774, overlap 170754 GCCGGCCGCGGATCA GCGGCTCGCGCGCC AGATCGAAC GGCGTGCGCGCCTC TTCTTGGCACAAATC TERM 164 170821 - 170809 - G 74 -6.2 -4.39571 | GGCACAAATCCAAAA GCGC GGCTT GCGC ATCCGGCCTGTCCCG Smed_6474 171924 - 171769 - | hypothetical protein TERM 165 171810 - 171868 + g 78 -3.2 -5.0538 | gap 3, overlap 171781 171810 171810 TACCGCGACCTGGTC -GCCGA-GCAGCTGG-AGGCGCTTTGTTC TCCA GAACAGATCGCCGGCCACCTGCTTCGCCC TTTTTTGGCGTGCCG Smed_6475 172148 - 173047 + | LysR family transcriptional regulator Smed_6476 173983 - 173585 - | cytochrome P-450 Smed_6477 174125 - 175213 + | feruloyl esterase Smed_6478 176012 - 175249 - | transposase Smed_6480 176652 - 176987 + | hypothetical protein Smed_6482 177515 - 177781 + | CopG/Arc/MetJ family transcriptional regulator Smed_6483 177778 - 178074 + | addiction module antitoxin Smed_6485 178952 - 178647 - | hypothetical protein Smed_6486 180520 - 178952 - | transposase IS66 Smed_6487 180934 - 180587 - | IS66 Orf2 family protein Smed_6488 181314 - 180931 - | transposase IS3/IS911 family protein TERM 166 181395 - 181384 - R 70 -3.6 -4.63486 | AGCGCCTCAACAAAA CCAG CTCA CCGG ACGCTCACCCACGAC Smed_6489 181835 - 181476 - | autoinducer synthesis protein Smed_6490 182259 - 183473 + | cobyrinic acid ac-diamide synthase Smed_6491 183470 - 184492 + | parB-like partition protein TERM 167 184537 - 184506 - f 86 -8.6 -4.66535 | AACCCGCAAAAGAAA GAGCCCCCTCAACG TTGC CGTCGTGGAAGCCC TTCTGTCTCTTTAGC Smed_6492 184647 - 185861 + | replication protein C Smed_6494 187671 - 187369 - | hypothetical protein Smed_6495 187786 - 188049 + | hypothetical protein TERM 168 188234 - 188187 - f 71 -12.1 -2.87211 | gap 2, opp_overlap 188178 188217, overlap 188214 AGCCTCGGTCAGATA GCCGGACCTTAATCCATGAGCCG AAAA CAGCGC-CGGATCAAGG-CCGGC CTGTTCACAGCGTGC TERM 169 188340 - 188327 - f 70 -3.7 -4.57569 | opp_overlap 188327 CGATGCGCCGAAAAA CCGGG CCGT CCCTG ATTTGCGCTTCAGCC Smed_6497 189070 - 189288 + | hypothetical protein Smed_6498 189285 - 189563 + | prevent-host-death family protein Smed_6500 190181 - 189762 - | PilT domain-containing protein TERM 170 191372 - 191382 + H 81 -3.2 -5.252 | opp_overlap 191380 TCGGGCATGGGGGGT GGTA TAA TGCC TTTTTTATGGCGGTA Smed_6502 191590 - 192570 + | restriction endonuclease Smed_6503 193025 - 194950 + | TIR protein TERM 171 195558 - 195568 + G 74 -5.4 -4.58283 | opp_overlap 195558 TATTATCGATCAAAG TGGT GAG ACCA TTTTTGACGACGTTC Smed_6504 194947 - 196500 + | hypothetical protein Smed_6505 196787 - 196491 - | hypothetical protein Smed_6506 197724 - 196795 - | integrase catalytic region Smed_6507 197984 - 197718 - | transposase IS3/IS911 family protein TERM 172 198739 - 198760 + G 75 -12.3 -3.67622 | gap 1 TGGGGAGGCATATCT GCGAGCCGGC TGG GCC-GCTCGC TTCCTTTTCGACCTC Smed_6508 198161 - 201754 + | hypothetical protein TERM 173 201781 - 201829 + T 95 -19 -2.68487 | gap 1, opp_overlap 201783 201788, overlap 201778 201791 201792 GCTCCCGACGGGAAG AATTCA-AGCATCGCCCCCGGCA TTTC TGCCGGGGGCGATGCTGTGAGGG TAGTCTAATCGTTGG TERM 174 201827 - 201783 - T 100 -23.8 -3.65046 | gap 1, opp_overlap 201781 201778 201791 201792, overlap 201788 TCCCGACGGGAAGAA TTCA-AGCATCGCCCCCGGCA TTTC TGCCGGGGGCGATGCTGTGAG GGTAGTCTAATCGTT TERM 175 201821 - 201788 - T 100 -28.3 -3.29013 | opp_overlap 201781 201778 201791 201792, overlap 201783 ACGGGAAGAATTCAA GCATCGCCCCCGGCA TTTC TGCCGGGGGCGATGC TGTGAGGGTAGTCTA TERM 176 201791 - 201818 + T 100 -22.8 -2.63102 | opp_overlap 201788 201783, overlap 201781 201778 201792 GGAAGAATTCAAGCA TCGCCCCCGGCA TTTC TGCCGGGGGCGA TGCTGTGAGGGTAGT Smed_6509 202500 - 201862 - | hypothetical protein TERM 177 202942 - 202953 + H 70 -3.6 -4.63486 | AAAAACGGTGAGCGT CCGG TGAG CTGG TTTTGTTGAGGCGCT Smed_6511 203023 - 203406 + | transposase IS3/IS911 family protein Smed_6512 203403 - 203750 + | IS66 Orf2 family protein Smed_6513 203821 - 205386 + | transposase IS66 Smed_6514 205386 - 205691 + | hypothetical protein Smed_6515 205785 - 206840 + | hypothetical protein TERM 178 206901 - 206867 - T 88 -10.6 -4.55287 | TTCAGTGAGATAAAA CCAACCGACACGCGCC GGC GGAGCGCCCCAGTTGG GCCGTCGCCAATCAA TERM 179 207500 - 207554 + T 77 -7.7 -4.32763 | gap 1, overlap 207501 TTTGGTTGCATAGGG TCAGCGCGCGTAGGCC-CGGAGCT TTCCATTT AGCGCAGGGGCCTGCGGGCGCGGG TTGTTTGTCTTTTCG Smed_6518 208307 - 207573 - | IstB ATP binding domain-containing protein Smed_6519 209808 - 208309 - | integrase catalytic region TERM 180 209176 - 209158 - G 71 -8.8 -3.88787 | opp_overlap 209158 GCACATCTGCAGAAA GCGGCGAT TAT ATTGCCGC TCCTTGCCGACAAAG TERM 181 209841 - 209820 - R 100 -9.4 -5.30616 | opp_overlap 209820 209818, overlap 209835 GCATCCAAATAAAAA GCCTCCGA ATGAAA CCGGAGGC TGTTGTAGCCCCATT Smed_6520 211174 - 209954 - | response regulator receiver protein Smed_6521 211634 - 211179 - | response regulator receiver protein Smed_6522 215082 - 211609 - | hypothetical protein TERM 182 211692 - 211708 + g 77 -4.4 -4.88407 | overlap 211693 CATTTTTTGAAACGC TCACGA ACAGG TCGTGG TTTTTCCTTAGGTCG TERM 183 213367 - 213386 + g 70 -7.2 -4.08945 | gap 1, opp_overlap 213369, overlap 213361 213370 GCGTGTAGCCGAACC GAC-CAACG GCT CGTTGTGTC TTTTAAGGAGCTCGT TERM 184 214978 - 214996 + g 78 -10.3 -4.08958 | overlap 214981 TCTCCTAAGCGTCCT CAACCCC ATAGC GGGGTTG TTCTTCTTTCGAACT Smed_6523 215640 - 216422 + | glycoside hydrolase family protein TERM 185 217017 - 216989 - g 76 -9.5 -4.08767 | CGGATCCGGCCAAAA GCGGGCGACGGAT TCT ATCCGTCGGCGAC AGACTCCATCACGAG Smed_6524 216440 - 217360 + | hypothetical protein Smed_6525 219165 - 218038 - | glycoside hydrolase family protein TERM 186 219152 - 219130 - G 86 -7.6 -4.72272 | GGCGCCCAGCAAAAA CACTGCGCGC ACC GCGAACAGCG AAACTTTTGGCATTC SEQUENCE gi|150395228|ref|NC_009636.1| Sinorhizobium medicae WSM419, complete genome (length 3781904) rpsT 135 - 401 + | 30S ribosomal protein S20 TERM 1 433 - 452 + F 100 -16.4 -4.19506 | opp_overlap 431 TTCTGTTGATGAAGT GCCCGGCG TTCG CGCCGGGC TTTTCCGATTCGCAT TERM 2 683 - 669 - f 95 -6.4 -5.42198 | CCGCAAAAAACAAAA CCGTTG ATT CAACAG GGATTCTCGAAGGAC TERM 3 955 - 935 - f 82 -9 -4.50976 | gap 1, opp_overlap 943 953 GTCGAGACGATAAAA CCGG-GCGA GCCT TCGCACCGG AGCGAGGACGTTTCG TERM 4 1298 - 1273 - f 93 -5.3 -5.36441 | overlap 1274 1277 GGCGGACATAAAAAA TGAGGCCGCCA GAAA TGACGGCATCG GATAAAGAAATTGGA TERM 5 1297 - 1274 - f 72 -8.8 -3.81141 | overlap 1273 1277 GCGGACATAAAAAAT GAGGCCGCCA GAAA TGACGGCATC GGATAAAGAAATTGG TERM 6 1419 - 1399 - f 70 -3.9 -4.56597 | overlap 1401 GCGGCGGGGGAAAAA CACGACATG CGG CATGACGCA CTCTTCGAGCGGGTA TERM 7 2378 - 2345 - g 73 -10.9 -3.5394 | AAATGCGCCTGGAAA TGCTGAAGCGCCGCC TCGA AGCGGCGCGCCAGGA CGATGCGACACTCGA dnaA 1405 - 2850 + | chromosomal replication initiation protein TERM 8 2892 - 2877 - f 100 -11.8 -4.42386 | opp_overlap 2877 TTTCCACTTACAAAA GCCCGG TCCG CCGGGC TTTTTTGTTGAATCG TERM 9 2877 - 2892 + F 100 -11.8 -5.4833 | opp_overlap 2877 TTTCCACTTACAAAA GCCCGG TCCG CCGGGC TTTTTTGTTGAATCG TERM 10 3002 - 3018 + F 85 -3 -5.40072 | gap 1, opp_overlap 2996, overlap 2994 2993 2994 TTTGAAGGAGGGCTT CAGCAGA AGCC TC-GCTG TTTTTTTCGCCCCGC Smed_0003 3085 - 3459 + | DGPFAETKE family protein Smed_0004 3456 - 4739 + | RNA polymerase ECF-subfamily sigma factor Smed_0005 5026 - 5508 + | activator of Hsp90 ATPase 1 family protein TERM 11 6041 - 6065 + G 82 -11.3 -4.07687 | CGCTTATCTCAACCT GGAGGACGCGG ATG CGGCGGCCTCC TTTTACGGCCGGGCT Smed_0006 5532 - 6398 + | glyoxalase/bleomycin resistance protein/dioxygenase Smed_0007 7582 - 6437 - | coproporphyrinogen III oxidase TERM 12 7579 - 7562 - G 70 -12.7 -2.89564 | opp_overlap 7560, overlap 7547 7564 CGGCCAGTGCACATA GACCCCG AAAC CGGGGTC CATTCCGTCACCGAT Smed_0008 8274 - 7630 - | putative deoxyribonucleotide triphosphate pyrophosphatase Smed_0009 8718 - 8305 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 13 8617 - 8596 - G 83 -7.9 -4.62336 | gap 1, opp_overlap 8596 8590, overlap 8568 8598 ACCGCAGCGGAAAAA GACGTGCCGG TTG CCGGCGCG-C GTAATCTTTTCGAGA TERM 14 8616 - 8598 - G 81 -11.6 -3.92746 | opp_overlap 8596 8590, overlap 8568 8596 CGCAGCGGAAAAAGA CGTGCCGG TTG CCGGCGCG CGTAATCTTTTCGAG TERM 15 8750 - 8765 + r 72 -6 -4.36595 | opp_overlap 8737 8736, overlap 8758 ACCCGTGCTGGATCA GCCGGC GATC GCCAGC TTTTGCATTTCGATG rph 9466 - 8747 - | ribonuclease PH TERM 16 9909 - 9924 + G 87 -6.1 -5.1675 | overlap 9896 CCGGCCGGCTCCCGA CGCAG ACGGGC CTGCG TTTTTTCGTCGATGC hrcA 9671 - 10750 + | heat-inducible transcription repressor Smed_0012 10909 - 11535 + | ribulose-phosphate 3-epimerase Smed_0013 12138 - 11674 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 17 12306 - 12273 - R 74 -11.1 -3.53012 | gap 1, overlap 12242 12240 CCCGCTGGTCGGAAA GACGGGGAAAGCCA GTCCGGT CGGCTT-CCCCGTC TCCACTCATGCCTTG Smed_0014 12884 - 12312 - | sigma 54 modulation protein/ribosomal protein S30EA Smed_0015 14680 - 13139 - | RNA polymerase factor sigma-54 TERM 18 14223 - 14198 - G 81 -11.9 -3.93782 | gap 1, overlap 14191 CGATCCAAGAGCAAA GGGAAGCTGCTC GAT GAGC-GCCTCCC TCAATGTCTTGCGGC Smed_0016 15681 - 14869 - | ABC transporter related TERM 19 15604 - 15640 + g 91 -9.5 -4.60924 | gap 3, overlap 15634 GTCATAGCGGGTTTT GTCGACCGCGCGGGCAGC TGTG GCTGCC-GC-CGG-CGGC TTTTTGCCCCGTTTG Smed_0017 16254 - 15694 - | OstA family protein TERM 20 15798 - 15808 + g 72 -2.4 -4.74103 | CGTTCAACTGGCAGC CGAC GAA GACG TTTTTGCCTTCCGAA Smed_0018 16954 - 16286 - | hypothetical protein Smed_0019 17030 - 17254 + | hypothetical protein TERM 21 17352 - 17407 + G 91 -16 -3.65812 | gap 1, opp_overlap 17342, overlap 17393 17393 CGAACTCGCCATAGC CGACCGCCGCAGCCT-GCGCAGAAAGC TGA GCTTCTGGCGTTGGGCGGCGGCGGCCG TTCTCTTCGCCGGCG TERM 22 17714 - 17748 + G 71 -13.6 -2.53911 | gap 1, overlap 17706 17736 17744 CAGGCTACCTGATCG CG-CTCGCGGGCGAC CGTATC GTCGCCGGCGAGACG TCGATTACCGGTTCG Smed_0020 17332 - 18291 + | signal peptide peptidase SppA, 36K type TERM 23 18504 - 18543 + G 100 -14.5 -4.18018 | gap 2, opp_overlap 18494 18516 GATCACGGATGCGCT TGCTGCCGGAAACCGCGTG GAGC TACGCGGTTTC-GGC-GCA TTTTCGGTGAAGAAC ihfB 18394 - 18705 + | integration host factor subunit beta Smed_0022 18885 - 19229 + | hypothetical protein Smed_0023 19703 - 19245 - | carbon monoxide dehydrogenase subunit G TERM 24 19897 - 19887 - g 80 -5.4 -4.8622 | overlap 19890 CGCGTGAAGGAAAAA GATC GGC GATC GAAGAACGCCTCCGT TERM 25 19922 - 19904 - g 75 -11.6 -3.67597 | overlap 19890 TCGGCGATCGAAGAA CGCCTCCG TGA CGGCGGCG AAGAGCCGGGGCGCC TERM 26 19998 - 19984 - g 73 -3.4 -4.72272 | overlap 19985 TGCCGCCAGCAAAAA GCGCAG GGC CCGCGG CGAGGACCGGATCAA TERM 27 20312 - 20292 - g 76 -6.1 -4.58395 | TCCATCTGGGAAAAA GCCGATG CGGTCTT CACCGGC GATACGGAAGAGGAC Smed_0024 19875 - 21032 + | hypothetical protein Smed_0025 21029 - 21889 + | tRNA/rRNA methyltransferase (SpoU) Smed_0026 21889 - 22386 + | lipoprotein signal peptidase Smed_0027 22461 - 24680 + | integral membrane sensor hybrid histidine kinase Smed_0028 24797 - 25687 + | hypothetical protein TERM 28 25754 - 25741 - T 74 -2.3 -4.89009 | overlap 25747 25749 ATATTGAACCAAAAA GGAGA ACAT TCGCC GCTCTGCCTGCGAAG TERM 29 25831 - 25866 + T 75 -5.3 -4.59853 | gap 1, opp_overlap 25831 25832, overlap 25833 25833 25835 ACCAGTCATCAAATA TTGG-GCCCGCATCCG TTTTC TGGAAGCGGGCTCCTG TTTTTAAGCGCTTGC TERM 30 25833 - 25863 + T 74 -12.5 -2.93975 | opp_overlap 25832 25831, overlap 25831 25833 25835 CAGTCATCAAATATT GGGCCCGCATCCG TTTTC TGGAAGCGGGCTC CTGTTTTTAAGCGCT TERM 31 25833 - 25864 + T 77 -10.1 -3.91164 | gap 1, opp_overlap 25832 25831, overlap 25833 25831 25835 CAGTCATCAAATATT GG-GCCCGCATCCG TTTTC TGGAAGCGGGCTCC TGTTTTTAAGCGCTT Smed_0029 28231 - 25946 - | malic enzyme TERM 32 29122 - 29152 + G 77 -14.6 -2.87132 | overlap 29126 CAGTTTCTCGCGCGC GGAGCTCGCCGCCG CAT CGGCGGCAGTCTCC TATGTCGAAAAGACC TERM 33 29909 - 29923 + G 73 -12.8 -3.14132 | ATGATCGATACGGAT GCGGGC CGT GCCCGC TTCATCCACCGCCAG Smed_0030 28334 - 31081 + | DNA mismatch repair protein TERM 34 31492 - 31480 - g 93 -9.1 -4.71426 | opp_overlap 31480 GGCGCAGGAATAAAA TGCGC TGA GCGCA TCTCGTGGCTTCAGG TERM 35 32111 - 32129 + G 71 -4.6 -4.52857 | GGCAGGAGTACAAGC TCTTCC AGAAGGC GGAAGA TTTTCTCTGGGCGGT Smed_0031 31282 - 34131 + | PII uridylyl-transferase TERM 36 34264 - 34287 + G 74 -5.2 -4.56597 | opp_overlap 34255 34276, overlap 34266 TCAACACGGCGTTCC GGCTGCCGAA CACC TTCCGCAGAC TTTTTGCCGAGGGGG TERM 37 34344 - 34373 + G 76 -9.1 -4.07885 | TTCGCCAGGGAGATC GAGGCGAGCGGCA TGGA TGGCGCCCGCCGC TTTTCCGAGGAGGTC Smed_0032 34128 - 35735 + | integral membrane protein MviN TERM 38 35951 - 35965 + G 76 -9.2 -4.0257 | opp_overlap 35947 ATCGGCAATCAGACC GCCGGC CGG GTCGGC TTCTTCCTTTTTACC Smed_0033 35732 - 36121 + | glyoxalase/bleomycin resistance protein/dioxygenase Smed_0034 36212 - 37276 + | tryptophanyl-tRNA synthetase TERM 39 37585 - 37567 - g 78 -10.3 -4.08216 | CGACCCTGGCCAAAA TCGCGCA GACGG TGCGCGA ACGGATCGGCATCGA Smed_0035 37329 - 37820 + | UspA domain-containing protein TERM 40 37839 - 37866 + F 83 -12 -3.90588 | gap 1, opp_overlap 37808, overlap 37857 CCTGCCGGCGTTCCG GT-CCGCCGCGCA TGG TGCGCGGCAGCAC TTTACTTGCCGCATG Smed_0036 38024 - 38590 + | scaffold protein Nfu/NifU TERM 41 38634 - 38651 + F 74 -6.9 -4.35682 | CCTTTCAGCCCGCGC CCCTCGG TCAG CCTAGGG TTATTTTCCTTATAG TERM 42 39251 - 39262 + G 72 -7.2 -4.17089 | opp_overlap 39251, overlap 39243 CTGTCCGTCGAGAAA GCGC GCCT GCGC TTTTCCGGATTTGCC Smed_0037 38810 - 39466 + | peptidase M22 glycoprotease Smed_0038 39542 - 40045 + | GCN5-related N-acetyltransferase Smed_0039 40085 - 40954 + | phospholipid/glycerol acyltransferase TERM 43 42124 - 42143 + G 78 -2.8 -5.00138 | gap 1 CTGCGCCTTGTAGAT GCC-GTGAA CTA TGCACAGGC TTTTTCGTTTAAGTA TERM 44 42294 - 42258 - g 70 -11.6 -3.14211 | gap 2 AGCTTTGCTCATCAA GCAGCAG-CGC-GGCTTC GCC GAAGCCTGCGTCGGCCGC GAGATCGACCTGCTG Smed_0040 41068 - 42486 + | RNA modification protein Smed_0041 42491 - 43546 + | PhoH family protein Smed_0042 43610 - 44116 + | hypothetical protein Smed_0043 44129 - 45304 + | CBS domain-containing protein TERM 45 45991 - 46009 + G 84 -2.3 -5.26119 | overlap 45992 CGCTCGGCTTCGGCA TCGCCGA ATGGC TCCGCGG TTTTGTTTTTACCGG TERM 46 46329 - 46313 - g 74 -5.1 -4.63527 | overlap 46314 CGACCAGGCCAAAAA GCTCG ACGACCG CGAGC GCGCCTCGATCTTCG lnt 45522 - 47153 + | apolipoprotein N-acyltransferase TERM 47 47462 - 47438 - g 100 -9.1 -4.8269 | CAGAAGTACGAAAAA GGCACGAACCG CGT CGGCGCGAGCC GGTTGCAGAACATAT Smed_0045 47291 - 47710 + | XRE family transcriptional regulator TERM 48 47827 - 47857 + F 100 -19.9 -2.79796 | opp_overlap 47812 47832 47835, overlap 47832 47835 TCGTGATCTCCGGCA CGAAAGAAGCGGC GTCGA GCCGCTTCTTTCG TATGCTGCCCTGCGA TERM 49 47852 - 47832 - f 84 -12.6 -3.72695 | opp_overlap 47827 47832 47835, overlap 47835 ATCTCCGGCACGAAA GAAGCGGC GTCGA GCCGCTTC TTTCGTATGCTGCCC TERM 50 47832 - 47852 + F 87 -12.6 -3.86202 | opp_overlap 47832 47835, overlap 47827 47835 ATCTCCGGCACGAAA GAAGCGGC GTCGA GCCGCTTC TTTCGTATGCTGCCC TERM 51 47849 - 47835 - f 75 -8.5 -4.00042 | opp_overlap 47832 47827 47835, overlap 47832 TCCGGCACGAAAGAA GCGGC GTCGA GCCGC TTCTTTCGTATGCTG TERM 52 47835 - 47849 + F 75 -8.5 -4.05877 | opp_overlap 47835 47832, overlap 47832 47827 TCCGGCACGAAAGAA GCGGC GTCGA GCCGC TTCTTTCGTATGCTG TERM 53 49316 - 49300 - g 73 -8.7 -4.07568 | GTTCTCTTGGGAAAA GCTCGAC CTG GTCAAGC CGCTGAAAGAAGCAA Smed_0046 48104 - 49384 + | S-adenosylmethionine synthetase TERM 54 49460 - 49495 + F 77 -11.8 -3.51825 | opp_overlap 49429, overlap 49464 CAGGCGCGGCATCGA TCAGGGCGGGCGCTCC GGGA GGAACGTCCGCCTTCA TTGTGCTTCCGGTAA TERM 55 49464 - 49491 + F 88 -14.8 -3.5002 | opp_overlap 49429, overlap 49460 CGCGGCATCGATCAG GGCGGGCGCTCC GGGA GGAACGTCCGCC TTCATTGTGCTTCCG trmB 49601 - 50299 + | tRNA (guanine-N(7))-methyltransferase TERM 56 50405 - 50438 + T 100 -18.1 -4.85599 | overlap 50407 CCCGAGCGGGCGCAG CACCCCCTCTCCCCG CTTG CGGGGAGAGGGGCAG TTTTTATCCACTCAA TERM 57 50407 - 50436 + T 95 -19.3 -2.70044 | overlap 50405 CGAGCGGGCGCAGCA CCCCCTCTCCCCG CTTG CGGGGAGAGGGGC AGTTTTTATCCACTC Smed_0048 50707 - 50450 - | hypothetical protein Smed_0049 51189 - 50758 - | heat shock protein Hsp20 TERM 58 52078 - 52056 - g 73 -3.3 -4.70659 | gap 1, overlap 52058 TTCGACATCGAAAAA TACGGCACCG ATGG CGG-GCCGCT GCATGATCCGACGGT TERM 59 52076 - 52058 - g 73 -8.1 -3.96999 | gap 1, overlap 52056 CGACATCGAAAAATA CGGCACCG ATGG CGG-GCCG CTGCATGATCCGACG Smed_0050 51351 - 52295 + | inosine/uridine-preferring nucleoside hydrolase TERM 60 52327 - 52351 + T 81 -12.8 -3.57144 | opp_overlap 52324, overlap 52326 TCTGGGAGATGATGA CGGCGCCCGA TGAGT TCAGGCGCCG TTTGGAAGTCCGAAG Smed_0051 54767 - 52377 - | methyl-accepting chemotaxis sensory transducer TERM 61 53281 - 53320 + g 71 -12.8 -3.01791 | GTCCGATGCGACAGG TCGTTGGCGGCACTTGAG ATCT CTCCGGTGCCGCTGCCGA TGTTGACGACGGAGT TERM 62 53473 - 53524 + g 74 -12.3 -3.53444 | opp_overlap 53482 TGCGACAGGCCTTTG CCGAGACG-AGCGACGATGTCGCGC TGAA GCGCGCCGGCCTCGCTGCGT-TCGG TTTCAGACCGGCTGC Smed_0052 55939 - 55019 - | ribokinase-like domain-containing protein TERM 63 55456 - 55413 - G 81 -13 -3.78775 | gap 1, opp_overlap 55411 55409 55413, overlap 55414 TTGGCGATGACGAAA TCGGCGCTG-CGACCGAGGCG GGC CGCATCGGGCGTCAGCGGCGC TATATTGATGATCGA TERM 64 55413 - 55456 + g 73 -13 -3.14693 | gap 1, opp_overlap 55413 55414, overlap 55411 55409 TTGGCGATGACGAAA TCGGCGCTG-CGACCGAGGCG GGC CGCATCGGGCGTCAGCGGCGC TATATTGATGATCGA TERM 65 55455 - 55414 - G 83 -16.5 -2.87051 | gap 1, opp_overlap 55413 55411 55409, overlap 55413 TGGCGATGACGAAAT CGGCGCTG-CGACCGAGGCG GGC CGCATCGGGCGTCAGCGGCG CTATATTGATGATCG TERM 66 55549 - 55563 + g 70 -10 -3.63744 | overlap 55548 GCTGCAGCATCAGCG TGTCGC CGG GCGACA TCTTTTCGACCGCGC Smed_0053 57239 - 56040 - | hypothetical protein TERM 67 57242 - 57226 - G 83 -6.5 -4.88407 | TGATCGAAGGAAAAA GCTATGG GCT CCATGGC CGCAACGTAAACGGA def 57379 - 57903 + | peptide deformylase TERM 68 58106 - 58081 - g 77 -12.5 -3.58726 | gap 1, overlap 58078 GCCGTGTATACACAA CCGCCGCGGCCC GGC GGGCGGCG-CGG CCTCGATCTCCAGAA fmt 57979 - 58914 + | methionyl-tRNA formyltransferase TERM 69 59608 - 59631 + G 74 -5.9 -4.49556 | opp_overlap 59602, overlap 59606 59605 ACCGCAAAGCCTGCG GTCCGGTCG CCCCGC CGGACGGAC TTTATTTCATGCGCG truA 58914 - 59657 + | tRNA pseudouridine synthase A Smed_0057 61664 - 59712 - | putative Chase2 sensor protein TERM 70 60545 - 60556 + g 72 -7.2 -4.1711 | opp_overlap 60528, overlap 60543 CGCGCGTGATCTCGC GGCG GCGG CGCC TTTCTTCCGCGTAAT TERM 71 61227 - 61214 - G 77 -3.7 -4.82901 | CGCGTTCCAGAAAAA CGGGC AGGG GCTCG GTCCGGACGAACTGC Smed_0058 65260 - 61664 - | TonB-dependent receptor TERM 72 63414 - 63451 + g 70 -11.9 -3.16742 | gap 1 TTGGCCCCGAGTGCC GCCGTGTCGCCGCCCTTG GCG CGGGTGCGGCG-CAGGGC TTCCTGAGCGTTGAG TERM 73 63965 - 63942 - G 83 -15.2 -3.22774 | CAGATGGACGAGGAA CCGGGCGCGG TCTG CAGCGCCCGG TTCAGATCCGAAAGG Smed_0059 65391 - 65936 + | hypothetical protein Smed_0060 66586 - 65990 - | hypothetical protein Smed_0061 67853 - 66573 - | succinyl-diaminopimelate desuccinylase TERM 74 67924 - 67891 - R 100 -21.1 -3.53012 | opp_overlap 67896, overlap 67892 CGGGTGTGGCCGAAA GTGAACGGGCCGGAC GCAT GTCCGGCCCGTTCAT GGCGCCGTGTGGGGC TERM 75 67923 - 67892 - R 100 -24.6 -2.71712 | opp_overlap 67896, overlap 67891 GGGTGTGGCCGAAAG TGAACGGGCCGGAC GCAT GTCCGGCCCGTTCA TGGCGCCGTGTGGGG TERM 76 67896 - 67919 + r 100 -19.6 -3.14683 | opp_overlap 67892 67891 GTGGCCGAAAGTGAA CGGGCCGGAC GCAT GTCCGGCCCG TTCATGGCGCCGTGT Smed_0062 71134 - 67949 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 77 70526 - 70550 + g 79 -9.1 -4.11692 | overlap 70527 ATTGGCAATGTCGCT CGCGGCCAGGC CGC GCTCGGCCGCC TTTTCGGGGTCGATC TERM 78 70527 - 70549 + g 71 -12.6 -3.06694 | overlap 70526 TTGGCAATGTCGCTC GCGGCCAGGC CGC GCTCGGCCGC CTTTTCGGGGTCGAT TERM 79 71202 - 71169 - R 78 -8.2 -4.43477 | gap 2, overlap 71170 71171 TTCAGGCAAGCAAAA GGGCATCTGCGGCGAA GACG TTCGCCGC-GA-GCAC CGCTGCATGCCGTTG Smed_0063 72470 - 71262 - | RND family efflux transporter MFP subunit Smed_0064 73349 - 72537 - | alpha/beta hydrolase domain-containing protein Smed_0065 73489 - 74397 + | LysR family transcriptional regulator Smed_0066 74562 - 74407 - | hypothetical protein TERM 80 74656 - 74626 - R 79 -12.6 -3.35679 | GGGGTTCAGGGACAA TGTCCCGGCTGG GTGCTTG CCATCCGGGACA ATCCCGCCTCAAGAC Smed_0067 76545 - 74665 - | DEAD/DEAH box helicase domain-containing protein TERM 81 74819 - 74829 + g 73 -3.2 -4.72986 | TCGAACTTGCGTTTC GGCT TGA AGTC TTTTTGCTCGCGCTC TERM 82 74850 - 74862 + g 74 -4.7 -4.65933 | overlap 74835 74834 GCTCGCGCTCCGATG CGGGC GCC GGCCG TTTCTTTTCGAAATC Smed_0068 77084 - 76698 - | hypothetical protein dapD 77944 - 77087 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Smed_0070 78206 - 79105 + | hypothetical protein Smed_0071 79819 - 79106 - | pyrimidine 5'-nucleotidase TERM 83 79793 - 79811 + g 73 -3 -4.72272 | overlap 79795 GGCGAATTCGGCACG GGTCGGCT GAC GGTCGAGC TTTTTCATGGCCGGC Smed_0072 80028 - 80942 + | hypothetical protein Smed_0073 81018 - 82130 + | methylated-DNA--protein-cysteine methyltransferase Smed_0074 82168 - 82944 + | hypothetical protein TERM 84 83026 - 82977 - T 100 -23.1 -3.35679 | gap 1, overlap 82979 82981 83024 TGCGCTGATGTACAA GAGA-TTCGCTCCTCTCCTCGGGT TGA ACCCGAGGAGAGGAGCGAAATGAC GCGAATTAAGGCGCG TERM 85 83023 - 82979 - T 100 -25.9 -3.24924 | overlap 82977 82981 CGCTGATGTACAAGA GATTCGCTCCTCTCCTCGGGT TGA ACCCGAGGAGAGGAGCGAAAT GACGCGAATTAAGGC TERM 86 83021 - 82981 - T 100 -32.9 -3.18945 | overlap 82979 82977 CTGATGTACAAGAGA TTCGCTCCTCTCCTCGGGT TGA ACCCGAGGAGAGGAGCGAA ATGACGCGAATTAAG Smed_0075 83931 - 83044 - | acetylglutamate kinase TERM 87 83328 - 83347 + g 71 -11.4 -3.42459 | opp_overlap 83298 GTGCGCCGGCGATCG CGCCGGCA AAGG TGTCGGCG TTGATGTTGTAGGTG Smed_0076 84285 - 84995 + | hypothetical protein Smed_0077 85633 - 85094 - | hypothetical protein Smed_0078 86429 - 85776 - | GTPase EngB TERM 88 85875 - 85864 - G 70 -7.2 -4.08945 | opp_overlap 85864 AGCACCTCGGGAAAA GCGG CCGG CCGC TTCCTGATCTTCTCG TERM 89 86453 - 86465 + r 82 -10.5 -4.15453 | GTACCTCTTTGCCTC GCCGG CAT CCGGC TTTTAGGGTGGCTTG TERM 90 86554 - 86530 - R 100 -15.7 -5.10933 | GGATCTAAAAGAAAA GCCCCGGAACG CAT CGCTCCGAGGC TCCATGCGAGCGTAT Smed_0079 88370 - 86577 - | putative inner membrane protein translocase component YidC TERM 91 88240 - 88250 + g 74 -4.6 -4.56775 | CCCGGTTGCGACTGG GCCT GCT GGGC TTTTTCCGCGGCAAT TERM 92 88380 - 88400 + r 73 -11.1 -3.42338 | overlap 88378 88383 88393 CATCATGATTTCCTG GAACCGGCC GGT GGCCGCTTC TGTTTCGGCTTGATT rnpA 88765 - 88367 - | ribonuclease P TERM 93 88728 - 88700 - G 100 -13.2 -4.59773 | gap 1, opp_overlap 88663 88699 88697 88695 88700 88723 88724 CCGGACCGCCAAAAA CTG-CGGACGGCT TTTC AGCCGCCCGACAG CTATCTTGTCTTTAT rpmH 88921 - 88787 - | 50S ribosomal protein L34 TERM 94 89475 - 89460 - g 70 -7.6 -4.09685 | opp_overlap 89459 89472 GCCGACGGTTGAAAA GGCAAA GCCA TTTGCC GAGGGCATTCTCAAA Smed_0082 89239 - 91236 + | methyl-accepting chemotaxis sensory transducer TERM 95 91319 - 91354 + F 81 -12.5 -3.53091 | GGGTATCGGCATAGG GCTTCTCGCGGCGGC CGGACA GTCGCCGCGAGCAAC TTTCGGGGCGGGAAT TERM 96 91380 - 91392 + F 70 -4.7 -4.43859 | overlap 91381 GGAATTTCCCGGCGT GCGCG TGC CGCGG TTTTGTCACGTTATC TERM 97 91917 - 91965 + G 93 -16 -3.73072 | gap 2, overlap 91918 CGTGCCTGTTGTTCC TCGCCGCGCGCGGCGCCTTCAGGG ATG TCCTCA-GGCGCCGCGCA-GGCGG TTTCCTGGACCGGTT TERM 98 91918 - 91964 + G 87 -17.3 -2.83522 | gap 2, overlap 91917 GTGCCTGTTGTTCCT CGCCGCGCGCGGCGCCTTCAGGG ATG TCCTCA-GGCGCCGCGCA-GGCG GTTTCCTGGACCGGT Smed_0083 91523 - 92323 + | SNARE associated Golgi protein Smed_0084 92349 - 93770 + | pyridine nucleotide-disulphide oxidoreductase dimerisation region Smed_0085 93792 - 95273 + | integral membrane sensor signal transduction histidine kinase TERM 99 96750 - 96720 - g 83 -5.3 -5.07567 | overlap 96722 TGACAGGTGAAAAAA GCGTCGGCATCGG ATACG CCAATACCGTCTC GGGCGATAACAGTGG Smed_0086 95969 - 97768 + | YadA domain-containing protein Smed_0087 97770 - 98345 + | invasion associated locus B family protein Smed_0088 98359 - 99045 + | putative signal peptide protein Smed_0089 99542 - 99072 - | YbaK/prolyl-tRNA synthetase associated region Smed_0090 100297 - 99866 - | hypothetical protein Smed_0091 101068 - 100484 - | hypothetical protein Smed_0092 104843 - 101142 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 100 104179 - 104140 - G 86 -15.7 -3.62522 | gap 1, opp_overlap 104140, overlap 104141 TAATCCCTGTAATAA CGCTCGGCATCGGCGGCG GTGGT CGCCGCCT-CGCCGAGCA TGTCGTAGGAGTAGC TERM 101 104178 - 104141 - G 84 -17 -2.77192 | gap 1, opp_overlap 104140, overlap 104140 AATCCCTGTAATAAC GCTCGGCATCGGCGGCG GTGGT CGCCGCCT-CGCCGAGC ATGTCGTAGGAGTAG Smed_0093 105341 - 105021 - | hypothetical protein Smed_0094 106206 - 105400 - | metallophosphoesterase Smed_0095 106879 - 106316 - | Sel1 domain-containing protein Smed_0096 107072 - 107686 + | hypothetical protein Smed_0097 109642 - 107735 - | putative Chase2 sensor protein TERM 102 108663 - 108646 - G 74 -12.7 -3.3095 | overlap 108636 108634 AGACAGCTTCGATAA GCGGCAG GTGG CTGCCGC GGTAGGGCACGAAGC TERM 103 108994 - 108944 - G 84 -17.5 -2.72463 | opp_overlap 108941, overlap 108964 108966 ATCGAGTCTCAACCA GGCGGGCTCTCCGCCGAGAACAG GCGTG CTGCTGCCGGCGGCAAGCCGGCC CGCTTCGATACCAAG TERM 104 109102 - 109089 - G 91 -9.5 -4.46212 | TCGCCGACGAGAAAA GCCGC AGTC GCGGC CTCGGATCGGTCCAT TERM 105 109560 - 109540 - G 86 -8.1 -4.57353 | overlap 109541 109544 TTGCAGCATAGAAAA GCAGCGCCG CCG CGGCGAGGC TGGCAAAGACCCCGC Smed_0098 110435 - 109731 - | CRP/FNR family transcriptional regulator TERM 106 110051 - 110062 + g 72 -7.2 -4.13014 | opp_overlap 110043 110044, overlap 110033 AGAGGAAGCGGATGA CCGC CTCT GCGG TTTTCGGCCTGTGGG TERM 107 110524 - 110510 - H 86 -8.5 -4.66537 | TCTTGCAACAGAAAA GCGCC TTTAG GGCGC GGGCGAACCGGGTGC Smed_0099 110674 - 111111 + | DoxX family protein TERM 108 111171 - 111124 - T 76 -11.8 -3.34344 | gap 1, opp_overlap 111127 111134, overlap 111134 TGACCGTCCAATCAA CCGCGACAGAGGGGCCCGTCGGC ACC GCCGGCCGGCCCCTTTG-CGTTG GCTCCAGGATGCGAA TERM 109 111127 - 111168 + T 100 -20.9 -3.05816 | gap 1, opp_overlap 111124 111134, overlap 111134 CCGTCCAATCAACCG CGACAGAGGGGCCCGTCGGC ACC GCCGGCCGGCCCCTTTG-CG TTGGCTCCAGGATGC TERM 110 111134 - 111162 + T 100 -19.5 -3.76952 | opp_overlap 111124 111134, overlap 111127 ATCAACCGCGACAGA GGGGCCCGTCGGC ACC GCCGGCCGGCCCC TTTGCGTTGGCTCCA TERM 111 111162 - 111134 - T 90 -17.3 -2.89921 | opp_overlap 111134 111127, overlap 111124 ATCAACCGCGACAGA GGGGCCCGTCGGC ACC GCCGGCCGGCCCC TTTGCGTTGGCTCCA Smed_0100 111624 - 111196 - | RbsD or FucU transport Smed_0101 112858 - 111629 - | ROK family protein TERM 112 111862 - 111852 - G 74 -5.4 -4.58663 | ACGACCGCGGAAAAA TCGA CGA TCGA GACGGCGGAAACGAC TERM 113 112921 - 112911 - H 71 -6.8 -4.1822 | TGGTATCCGAACAAA GCAC CAC GTGC AGAATGCCACAAAGA Smed_0102 113078 - 114103 + | periplasmic binding protein/LacI transcriptional regulator Smed_0103 114380 - 115462 + | monosaccharide-transporting ATPase Smed_0104 115462 - 116244 + | ABC transporter related frcK 116241 - 116861 + | putative fructose transport system kinase Smed_0106 117052 - 118095 + | dihydroorotase pyrE 118169 - 118867 + | orotate phosphoribosyltransferase TERM 114 119039 - 119061 + G 76 -5.5 -4.57341 | gap 1, opp_overlap 119024 CGGCCATCGCGCTTG GCCGGCTCGG CGTC CCCA-CCGGC TTTTTCACCGGCCTT TERM 115 119272 - 119246 - g 74 -12.3 -3.40403 | gap 1, opp_overlap 119246 119245 119263, overlap 119249 CGGGGCGGATGATAA CGACCGAGCACC TTCC GGCGCTCGG-CG ATTTCTGCGAGGCGC TERM 116 119270 - 119249 - g 74 -13.7 -2.86271 | opp_overlap 119246 119245 119263, overlap 119246 GGCGGATGATAACGA CCGAGCACC TTCC GGCGCTCGG CGATTTCTGCGAGGC Smed_0108 118915 - 119847 + | ribokinase-like domain-containing protein TERM 117 119921 - 119949 + T 83 -8.1 -4.62069 | opp_overlap 119914, overlap 119923 GGGGAGAAGGAAATG TTGAGGCGCCG ACTGGAA CAGCGCCTCGA TTTTTCCAATCAGCG pgi 121584 - 119959 - | glucose-6-phosphate isomerase TERM 118 121717 - 121704 - R 77 -2.3 -5.08824 | overlap 121705 121706 GCTGCAGCGAAAAAA GCGGA TGGC TCCTC CCTCATCCGGCCGCC Smed_0110 123476 - 121776 - | acyl-CoA synthetase TERM 119 122142 - 122161 + g 78 -12.2 -3.72695 | opp_overlap 122112, overlap 122112 CCGGAAGAAGCCGTC CGGCGAAA TGGC TTTCGCCG TTTCCTCGGGGCGCT TERM 120 123523 - 123506 - H 76 -6.9 -4.42806 | overlap 123508 CGATCGCCAAATAAA CGGCCGT CATG ACGGCGG AGAAAAATCCCTCCC TERM 121 124058 - 124027 - g 72 -4.2 -4.5442 | opp_overlap 124031, overlap 124028 TCGCGAACGAGAAAA CCTTCCCGTGGAGC CGCG GCTCTTCGGGCAGC CCGCACACTCACGGT Smed_0111 123998 - 125173 + | hypothetical protein Smed_0112 125269 - 125934 + | CDP-alcohol phosphatidyltransferase TERM 122 126385 - 126407 + G 75 -4 -4.70659 | opp_overlap 126381 ATCTGGACAATCCTT CGCGCGCTTT TCC GAAGGGCACG TTTTTGCCTGTCCCC TERM 123 126501 - 126479 - g 75 -12 -3.65812 | opp_overlap 126500 CGCCGGTGAAGAGAA GGACGCATTC CTC GAACGCGCCC GCGCAGCGGTGTCTG Smed_0113 125931 - 126542 + | phospholipid/glycerol acyltransferase Smed_0114 126550 - 127491 + | phosphatidate cytidylyltransferase Smed_0115 128709 - 127699 - | 2-nitropropane dioxygenase NPD TERM 124 129258 - 129231 - g 70 -12 -3.1355 | gap 1, overlap 129233 GCGATCGAGATGGAA GAGCGCGCTGCCT TGA AGG-AGCGCGCAC AGACGCCGGTGGTCA TERM 125 129256 - 129233 - g 73 -13.2 -3.12803 | gap 1, overlap 129231 GATCGAGATGGAAGA GCGCGCTGCCT TGA AGG-AGCGCGC ACAGACGCCGGTGGT TERM 126 129519 - 129550 + G 79 -8.5 -4.3767 | opp_overlap 129535 GGCCCTGCCGACCGG CGGCCGCGCAAGC ACAGGC GCAGGCGCAGCCG TTTCTTCTCCTATGC TERM 127 129830 - 129847 + G 71 -8.3 -3.83026 | overlap 129825 ACCCTTCGACGGCGA CGCCGGC GAGC GCCTGCG TTTGATCTCGCAAGC Smed_0116 129033 - 130190 + | hypothetical protein Smed_0117 131156 - 130254 - | hypothetical protein TERM 128 131861 - 131842 - g 70 -7.8 -3.9777 | opp_overlap 131842 131844 TCGAACATGCAGAAA GACTGCCT TCGG AGGCGGTC TATGTCGTTCGCGTC Smed_0118 131391 - 132638 + | PAS/PAC sensor signal transduction histidine kinase TERM 129 132855 - 132877 + G 78 -10.4 -4.09739 | opp_overlap 132850, overlap 132849 CTTAAATTTACCGCA GCGGCGTTGG TTG CCTCCGCCGC TTTTGCGGGCGTTGC Smed_0119 132831 - 133865 + | putative phosphate-binding periplasmic protein TERM 130 133873 - 133906 + F 95 -17.5 -3.63569 | gap 1 TGCTCTGATCATGGC TG-GGCTCCGGCGCCA CTC TTGCGCCGGAGCCGCA TTCTTCCGAACTTGA Smed_0120 133960 - 135444 + | phosphate ABC transporter, inner membrane subunit PstC Smed_0121 135441 - 136763 + | phosphate ABC transporter, inner membrane subunit PstA Smed_0122 136777 - 137592 + | phosphate ABC transporter, ATPase subunit TERM 131 138007 - 137992 - g 83 -5.4 -5.02074 | gap 1, overlap 137994 CGATCTTGGAAAAAA CAC-CGC CAA GCGCGTG ATTGCGGTTGCCGGT Smed_0123 137681 - 138394 + | phosphate uptake regulator, PhoU Smed_0124 138486 - 139169 + | two component transcriptional regulator Smed_0125 139805 - 139329 - | GCN5-related N-acetyltransferase Smed_0126 140443 - 139880 - | GcrA cell cycle regulator TERM 132 140203 - 140238 + g 81 -15.4 -3.01791 | gap 1 TCGGTGCGCGAGGCG CGGACGCCGCCCGCTTG GGC CGAGCGG-CGGCGGTCG TGTTCCCACCGGCCT TERM 133 140736 - 140753 + H 91 -8.3 -5.1417 | overlap 140737 GGGAATAGTGCCTCT CGCCGCC GCAA GGCGGCA TTTTTAATTTTATCG TERM 134 140737 - 140752 + H 81 -11.8 -3.66876 | overlap 140736 GGAATAGTGCCTCTC GCCGCC GCAA GGCGGC ATTTTTAATTTTATC argD 140812 - 142011 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein Smed_0128 142052 - 142963 + | ornithine carbamoyltransferase TERM 135 143733 - 143722 - g 75 -3.6 -4.82901 | overlap 143724 CGCTGCCGAGAAAAA CGGG CGGT CCCA GCCTCACGAGCTGCT TERM 136 144216 - 144191 - g 70 -11.9 -3.14132 | gap 1 GTTCGCGTCTATGAA CCGCAGGCGGTC TAT GACCGC-TGCAG CTGCTCGCGCGAGAA hslO 143372 - 144364 + | Hsp33-like chaperonin apaG 144845 - 144453 - | ApaG Smed_0131 146011 - 145040 - | transposase IS116/IS110/IS902 family protein TERM 137 146551 - 146586 + G 74 -2.2 -4.87626 | CCACTGGGTTTCATT GCCGCCGATCCGGGCG CAAA CGGGCTTGCCGGCGGC TTTTTGCTGTTCGCC Smed_0132 146248 - 146865 + | CDP-alcohol phosphatidyltransferase TERM 138 146914 - 146869 - T 82 -8.9 -4.41494 | gap 1, overlap 146870 GACGTGCAATGAAAA CGCCCGCTGC-CGAGTGAACCG GGG CAGTTCAGGAGGGCAGCGGGCT GCGTGGCCTTGCAGG TERM 139 146913 - 146870 - T 75 -12.4 -3.24414 | gap 1, overlap 146869 ACGTGCAATGAAAAC GCCCGCTGC-CGAGTGAACCG GGG CAGTTCAGGAGGGCAGCGGGC TGCGTGGCCTTGCAG Smed_0133 148117 - 146933 - | O-succinylhomoserine sulfhydrylase TERM 140 148164 - 148146 - H 100 -10.2 -6.20267 | opp_overlap 148146 148159 148161, overlap 148158 148159 148161 TCAAAAACAAAAAAA CCGGCCGC GAA ACGACCGG TTTGATACCCGGCCT TERM 141 148159 - 148178 + H 73 -3.4 -4.7889 | opp_overlap 148146 148159 148158 148161, overlap 148146 148161 AACCGGCCGCGAAAC GACCGGTT TGAT ACCCGGCC TTTTTAGCTATTTGT Smed_0134 148315 - 149412 + | 2'-deoxycytidine 5'-triphosphate deaminase TERM 142 150267 - 150291 + G 70 -7.2 -4.0127 | overlap 150258 150258 150282 GAGGGGGCGGTTGCG GCTGCATTTT CCGAC GGAATGCAGC TTTCCTTCTGGGTAT Smed_0135 149658 - 150509 + | extracellular solute-binding protein Smed_0136 151423 - 150611 - | hypothetical protein Smed_0137 151894 - 151484 - | hypothetical protein Smed_0138 152805 - 151960 - | hypothetical protein TERM 143 152088 - 152059 - G 70 -9.9 -3.61398 | gap 1 GTCGTCCCCGAAGAA GCCGAGG-CGGGCG CTT CGCGCGGCCTCCGC CTTCGCCTCGAGCGG Smed_0139 153453 - 152806 - | putative phage repressor TERM 144 153776 - 153793 + G 72 -2.6 -4.74215 | overlap 153777 AATCCTGAGATCGGA ACGGCA TCTCGT TGCCGC TTTTCTTGCTGCTCT Smed_0140 153714 - 154838 + | sodium/calcium exchanger membrane region Smed_0141 155376 - 154813 - | HxlR family transcriptional regulator TERM 145 155008 - 154998 - G 73 -6.8 -4.25283 | ACTCGCTCATGAAAA GCTC CCA GAGC TTCGGCCCGCCGTCT Smed_0142 155503 - 155976 + | activator of Hsp90 ATPase 1 family protein TERM 146 156278 - 156258 - T 100 -16.1 -5.0133 | overlap 156245 CACGGCGTGAAAAAA GGCCGCGCC ACC GGCACGGCC CTCGAAATCTTCATG Smed_0144 158519 - 156309 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 147 157535 - 157515 - G 73 -12.5 -3.14564 | opp_overlap 157516 157526, overlap 157495 CGAGGCGCCCATGAA GCCGGCGCC GAC GACGCCGAC ATGTCGGAGCTCGGT TERM 148 157806 - 157842 + g 79 -8.6 -4.25104 | GAGTTGTGCGGAGGC GGGTGTCCAGATGCCG CCGCC CGGCAGCTTGAAGCCC TTTTCGTCCCAGGGC TERM 149 158240 - 158265 + g 100 -6.7 -5.50723 | opp_overlap 158240, overlap 158243 CGACGAGGTCGAAGA GTTTCCGGGCG GCAT CGTCCGGATCC TTTTTCTTTTCCTCG TERM 150 158243 - 158262 + g 71 -11.4 -3.50051 | opp_overlap 158240, overlap 158240 CGAGGTCGAAGAGTT TCCGGGCG GCAT CGTCCGGA TCCTTTTTCTTTTCC TERM 151 158412 - 158436 + g 80 -14.4 -3.19653 | overlap 158425 158427 GATCCCGTCCAGTTC CGTCATCACC TCTTC GGTGATGACG TTCATCGACTTGTCG Smed_0145 159749 - 158541 - | acetyl-CoA acetyltransferase Smed_0146 161649 - 159853 - | acyl-CoA dehydrogenase domain-containing protein TERM 152 161783 - 161758 - H 73 -12.1 -3.09234 | opp_overlap 161758, overlap 161749 161748 161777 AGAAATGCTAGCCAA TTTTGACGTTT GCGT AAACGTCAAAA TTTTGCAGCGCGAAA TERM 153 161758 - 161783 + H 86 -12.1 -4.07568 | opp_overlap 161749 161748 161758 161777 AGAAATGCTAGCCAA TTTTGACGTTT GCGT AAACGTCAAAA TTTTGCAGCGCGAAA TERM 154 162297 - 162328 + G 70 -10 -3.57144 | gap 1, opp_overlap 162291, overlap 162304 TCCGAGATACTCGAC CGCCAGCGCG-CGCT CAA GGCGGCGCGCGAGCG TTTGCCGCTGCGCGA TERM 155 164581 - 164561 - g 72 -14 -2.81888 | overlap 164553 164558 GGTGAAAGGCAAGGA GGTGCCGG GCGCG CCGGCACC GGCGATCGAGCGCAA TERM 156 165150 - 165132 - g 75 -3.7 -4.7254 | overlap 165133 AGCCTCTATGAAAAA GGCGCAG GCGTT CCGCGCG ATGGAGCAAAGGCAA TERM 157 165729 - 165709 - g 83 -9.7 -4.37092 | AGGCCTTTCAGAAAA CCGTCGG GCAGGAA CCGACGG GCGAGATCACCGACG Smed_0147 162099 - 165779 + | peptidoglycan binding domain-containing protein TERM 158 166552 - 166526 - g 74 -5.1 -4.58283 | gap 1, overlap 166530 CAAGGCGGCGAAAAA CCAGGC-GCC GCAGCTCA GGCGGCCCGG CCAGCACAATTGGAT Smed_0148 166098 - 167024 + | hypothetical protein TERM 159 167147 - 167172 + G 70 -7.5 -4.07568 | overlap 167148 GAGATCGGCATCTCT ACGGAGGAGAT TGCC ATCACCTCCGA TTTTCGGGGCGCCGA Smed_0149 167024 - 167827 + | hypothetical protein TERM 160 167832 - 167849 + F 91 -12.7 -4.0031 | opp_overlap 167830 167829 GCAAGGAATAGACTG CTCGGCC ATAG GGCCGAG TTCTTTCGTAAGCGT Smed_0150 168038 - 168445 + | glutathione-dependent formaldehyde-activating GFA Smed_0151 168552 - 168788 + | AsnC family transcriptional regulator Smed_0152 169564 - 168839 - | metallophosphoesterase Smed_0153 172328 - 169674 - | DEAD/DEAH box helicase domain-containing protein TERM 161 171390 - 171410 + g 71 -9.7 -3.72893 | opp_overlap 171390 GCGCGTGTTGACGAA GAGCAACGT CGT ACGGTGCTC TTTGATGGCGACATA TERM 162 171803 - 171771 - G 86 -15.5 -3.63073 | opp_overlap 171768, overlap 171797 CAGATCCTTGAAGAA GCGCTCCGCCTCGCC ATT GGCGAGAAGCAGCGC CAGTTGCTCCGGGGT TERM 163 172079 - 172059 - G 83 -12.5 -3.89822 | GAGCGAGGGCAGAAA GCCGGCGAG CGT CTTGCCGGC CCCGGTCGGCGCGAT TERM 164 172347 - 172325 - G 70 -12.2 -3.21062 | GACACGAAGACCGAA TCATGGATAA ATA TTATCCATGA TAGGAGATGCAGATG Smed_0154 172360 - 172866 + | BadM/Rrf2 family transcriptional regulator Smed_0155 172895 - 173356 + | alkylhydroperoxidase TERM 165 173405 - 173384 - T 79 -5.7 -4.77036 | CGGGATGAGGAAAAA TGTGTGCGG TTTT CCGCCCGCA TCCCGCGTCCTAACC Smed_0156 174093 - 173458 - | hypothetical protein Smed_0157 175215 - 174199 - | methyltransferase type 12 TERM 166 175380 - 175407 + G 71 -4.8 -4.4009 | gap 1, overlap 175370 175384 175385 CGGCTTCGTGATGAC GGTCTTCGGCTGG TAT CCGGCCG-ATATC TTTTATGCCATCCGC TERM 167 175385 - 175403 + G 74 -12.4 -3.48517 | overlap 175384 175380 TCGTGATGACGGTCT TCGGCTGG TAT CCGGCCGA TATCTTTTATGCCAT Smed_0158 175285 - 175551 + | hypothetical protein Smed_0159 175554 - 176057 + | SCP-like extracellular Smed_0160 176103 - 177473 + | MATE efflux family protein Smed_0161 178537 - 177449 - | dihydroorotate dehydrogenase 2 TERM 168 177545 - 177529 - G 71 -10.8 -3.53012 | overlap 177511 TCTCGCGGTCGCAAA GCGCGG AGAGG CCGCGC ACGATACGGCCCGGC TERM 169 177992 - 177964 - G 75 -11.8 -3.56568 | opp_overlap 177982, overlap 177967 CAAGCACCGCCGAAA GCA-GCGTCGCGAG GCT CTCGCG-CGCCTGC AGGTCGCGCAGGCCC Smed_0162 178881 - 178534 - | hypothetical protein TERM 170 179207 - 179167 - g 76 -8.8 -4.17048 | opp_overlap 179197 GTGTCGGGAAAACAA CGGAGAGCTCGTCTGCAG GATGG CCGCCGACGAGCGTGCCG CATTCGAACGGGAGC Smed_0163 179000 - 179437 + | putative signal peptide protein Smed_0164 179573 - 180220 + | two component LuxR family transcriptional regulator Smed_0165 183860 - 180354 - | integral membrane sensor hybrid histidine kinase TERM 171 180764 - 180782 + g 78 -11.6 -3.76373 | overlap 180774 180780 CGTCGCTCGCTTTCG CCGCTGCC ACG GGCTGCGG TTTCACTCTTGCCGC TERM 172 181146 - 181176 + g 72 -2.4 -4.70659 | opp_overlap 181148 181149, overlap 181148 181149 ATCGCTGCGCACGGA AAGCGAGGTCGGCA TGA TGACGAGCTCGATG TTTTTCGCTCTCGCC TERM 173 182546 - 182503 - G 74 -10.2 -3.81951 | gap 1 GCCCAGACGAGGAAA CCGCTGACCATT-CCCGCGAT CGC ACCGCGGGCATTGGCCTGCCG CCAGACGAGACCGCC TERM 174 184452 - 184465 + G 71 -8.1 -3.9243 | GGCTGCACCTCCGCC GCAGG ACAT CCTGC TTCTTTCCGAAATTC Smed_0166 184078 - 184506 + | large conductance mechanosensitive channel protein TERM 175 184772 - 184798 + G 70 -12.2 -3.18264 | CTGCCGACGCCGGAT TTCGTCAGCCGC GCG GCGGCCGACGCA TTGATGGGTGGCGAA TERM 176 185648 - 185616 - g 71 -12.7 -3.01791 | gap 1 ACGCCTTTCTGAAGA TCGACGGCGTCGCG GATTCG CGCGCCGCCG-CGA TCGACATCGTCGATC TERM 177 185708 - 185728 + G 71 -11.1 -3.45027 | overlap 185700 185704 185707 GCTTTCGGCGAGGGC GGCGCGC TCTTCAT GCGCGCC TGTTTCCTGCGCGAT Smed_0167 184634 - 185800 + | aspartate aminotransferase Smed_0168 185971 - 186999 + | UDP-glucose 4-epimerase Smed_0169 187332 - 187021 - | chorismate mutase-related enzyme Smed_0170 188558 - 187554 - | cytochrome d ubiquinol oxidase, subunit II TERM 178 188508 - 188462 - G 75 -3.5 -4.92239 | overlap 188465 188502 188507 GGAAAAACGGAAAAA GTATGCCGACGCCGAGGTCGA AGCCG TCGAGCACGACATAGGCAAGC ACCGCGAAAGCGATG Smed_0171 189963 - 188548 - | cytochrome bd ubiquinol oxidase subunit I Smed_0172 191440 - 190274 - | amidohydrolase Smed_0173 192266 - 191442 - | polar amino acid ABC transporter, inner membrane subunit Smed_0174 192988 - 192263 - | polar amino acid ABC transporter, inner membrane subunit TERM 179 193054 - 193092 + r 71 -13.2 -2.57931 | gap 2, opp_overlap 193054 193055 193056, overlap 193077 CCGTTCGAACAAAAA TGC-GT-GGCCGGCGGTC GCCCG GACCGCCGGCCTGCGGCG GTTATCCGCCGTAAA TERM 180 193089 - 193054 - R 100 -12.5 -5.06414 | gap 1, opp_overlap 193054 193077, overlap 193055 193056 CCGTTCGAACAAAAA TGCGTGGCCGGCGGTC GCCCG GACCGCCGGCCT-GCG GCGGTTATCCGCCGT TERM 181 193088 - 193055 - R 90 -16 -3.63367 | gap 1, opp_overlap 193054 193077, overlap 193054 193056 CGTTCGAACAAAAAT GCGTGGCCGGCGGTC GCCCG GACCGCCGGCCT-GC GGCGGTTATCCGCCG TERM 182 193089 - 193056 - R 86 -16 -2.77538 | gap 1, opp_overlap 193054 193077, overlap 193055 193054 GTTCGAACAAAAATG CG-TGGCCGGCGGTC GCCCG GACCGCCGGCCTGCG GCGGTTATCCGCCGT Smed_0175 193876 - 193094 - | extracellular solute-binding protein Smed_0176 194684 - 193911 - | ABC transporter related TERM 183 194265 - 194287 + g 81 -13.4 -3.61178 | opp_overlap 194258 194261 194260 194277 CTCATAAAGACCGAC CCGGCGAAGC AAG GCTTCGGCGG TTTCCAATGCCTCGG Smed_0177 194951 - 195577 + | TetR family transcriptional regulator Smed_0178 195590 - 196780 + | aminotransferase class I and II TERM 184 197370 - 197354 - g 71 -9.4 -3.70902 | opp_overlap 197353 197350 GCTCCGACAGCGAAA CGCTGC AGAGG GCAGCG ATCCTTTGTGCGGAG Smed_0179 196777 - 198390 + | hypothetical protein Smed_0180 198571 - 198993 + | hypothetical protein Smed_0181 199089 - 201623 + | bifunctional preprotein translocase subunit SecD/SecF TERM 185 201679 - 201704 + F 100 -18.3 -4.72272 | ACGCATCTCGTGCCA GGGGCAGCCTC CGAT GGGGCTGCCCC TTTTTCGTCGGAAAG Smed_0182 202141 - 202356 + | hypothetical protein Smed_0183 203437 - 202358 - | ABC transporter related TERM 186 203087 - 203101 + g 80 -5.6 -4.69664 | overlap 203088 CTTGAGGATGCCTGC GGCGTG CGA CACGCG TTTTTCGATCGTCTC TERM 187 204131 - 204180 + G 72 -12.2 -3.25823 | gap 2, opp_overlap 204127 204128 GGCGATCGAAAGCGG CGAT-GTCGCGAAG-GCCGGCGCA GCCC TGCGCCATCACATCGCGACGATCG TTGATCTGGGCCCCG Smed_0184 203535 - 204221 + | GntR family transcriptional regulator Smed_0185 204218 - 205198 + | alpha/beta hydrolase domain-containing protein Smed_0186 205222 - 206415 + | extracellular solute-binding protein Smed_0187 206521 - 207444 + | binding-protein-dependent transport systems inner membrane component Smed_0188 207441 - 208274 + | binding-protein-dependent transport systems inner membrane component Smed_0189 208298 - 209179 + | xylose isomerase domain-containing protein TERM 188 209475 - 209460 - g 76 -8.2 -4.18018 | overlap 209461 GGTCTTCATGGAAAA GCCGCC GTCC GGCAGC GCGGAAGGCGCGCGC Smed_0190 209176 - 210171 + | oxidoreductase domain-containing protein Smed_0191 210331 - 210792 + | BadM/Rrf2 family transcriptional regulator Smed_0192 210924 - 211928 + | KpsF/GutQ family protein Smed_0193 213220 - 211898 - | capsule polysaccharide biosynthesis protein TERM 189 212341 - 212317 - G 81 -4.1 -5.0065 | overlap 212318 CATCGAGAAAGAAAA CCCTCTCCCAG ATG CCGAGCGAGGC GGCGATGCCTGCAGT Smed_0194 214828 - 213236 - | sulfatase TERM 190 213904 - 213933 + g 77 -15 -2.89742 | opp_overlap 213901 CGTCGGGAACGAGGC CGCTGAGGACCG CAAACT CGGTCCGCAGCG TATATCCGCCTTCGA TERM 191 214312 - 214294 - G 70 -11.6 -3.21276 | overlap 214292 CCGGTCCGTAGAACA GCAGGGCC CAG GGCCCGGC GGCAATTCCGATCAA Smed_0195 215842 - 215039 - | short-chain dehydrogenase/reductase SDR Smed_0196 217294 - 215882 - | 8-amino-7-oxononanoate synthase TERM 192 216833 - 216817 - G 91 -9.3 -4.49556 | opp_overlap 216823 216825, overlap 216800 CGCTTACGAAACAAA CGGCGGC ATC GACGCCG TAGAACTGCGCGATC TERM 193 217232 - 217256 + g 70 -10 -3.66908 | overlap 217228 GTTCCTCATCCTGTC CAGCAGGCTC TCCTT GAGCGTGCTG TTCATTTTGGGGAAG Smed_0197 224793 - 217291 - | Beta-ketoacyl synthase TERM 194 224094 - 224076 - G 84 -8.1 -4.48987 | gap 1, opp_overlap 224088, overlap 224070 224079 GGCGCAGAACGAAAA CGACGCCG CCTT CGGCG-CG CACATAGCCGGCGCC TERM 195 224397 - 224378 - G 76 -9.2 -4.00042 | CCCGTCATGAAATAA GGTCCGGC GGCT GCCGGATC GTCGACCGTCAGGTT Smed_0198 225195 - 226382 + | polysaccharide export protein TERM 196 226427 - 226470 + F 70 -12.4 -2.70932 | gap 1, opp_overlap 226450 226451 GCCGCGATGCTGCGA TGTTCTGCAGCATGCCGCCAG AAT CCCGCGGCGTGC-GCCGAACA TGCTTGCCGCCGGGC Smed_0199 226557 - 227156 + | nicotinamidase TERM 197 227720 - 227759 + G 85 -15 -3.58726 | gap 1, opp_overlap 227710 227734 AACGAGCTGCGCTCG CGCGCGGCGATGAAGGGGC TCG GCCCCTTCA-CGCTGGACG TTCTCTATGCCCGGG Smed_0200 227261 - 228565 + | nicotinate phosphoribosyltransferase Smed_0201 228702 - 228914 + | hypothetical protein TERM 198 228957 - 228998 + T 83 -8 -4.57073 | opp_overlap 228978, overlap 228962 GCTTCACGATTGGAT CGGCCGGAGCGCC-TGGACG AAGC CGTCTGCGGCGCTC-GATCG TTTTTCACCGGGGTA Smed_0202 229563 - 229003 - | hypothetical protein TERM 199 229543 - 229567 + g 76 -8.5 -4.11692 | GCCGAGACGGGGAGG GCGCTTGCC GGACTGG GGCATGCGC TTTTGAGGCTCGGTC Smed_0203 229663 - 231639 + | 1A family penicillin-binding protein Smed_0204 231848 - 232351 + | hypothetical protein Smed_0205 232876 - 233082 + | hypothetical protein Smed_0206 233241 - 234533 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 200 234542 - 234578 + F 70 -12.1 -2.71268 | overlap 234540 234544 CGACTGATTGTTCAG CTCAGCGCCGGGAGCCG TTG CGGTTTCCGGCGCAACG TCCTATGTCCTACAG Smed_0207 234624 - 235064 + | hypothetical protein TERM 201 235251 - 235208 - g 76 -11.1 -3.76373 | opp_overlap 235211 235212 235237 TTCCGAAGACGTAAA CGCCGTCGTGCGC-GACAT TATCGACG ATGTCCGCGCGCG-CGGCG ATGCGGCGCTTGCAG TERM 202 236015 - 235987 - g 84 -16.8 -3.05963 | gap 1, opp_overlap 235995 AGCGTCAGTTGAAGA CGCTGCCG-CGTG CCGA CACGGCGGCAGCG AGCTGGCGCGATTTC hisD 235116 - 236420 + | histidinol dehydrogenase Smed_0209 236417 - 236893 + | hypothetical protein Smed_0210 236907 - 237386 + | protein tyrosine phosphatase TERM 203 237450 - 237438 - f 70 -4.1 -4.62069 | overlap 237449 CGGGTACCCGAAAAA GCCTT ATC AAAGC GGTTCACAAAGCCGC Smed_0211 237499 - 237762 + | translation initiation factor IF-1 Smed_0212 237816 - 238481 + | Maf-like protein TERM 204 238519 - 238509 - g 82 -3.2 -5.10461 | CGGAGGCAAGAAAAA CGCT TCG AACG TAGAACCCTTGCGCG Smed_0213 238486 - 238698 + | zinc-binding protein Smed_0214 239563 - 239321 - | hypothetical protein Smed_0215 239780 - 240880 + | HPr kinase Smed_0216 240867 - 241949 + | hypothetical protein Smed_0217 242157 - 242468 + | hypothetical protein Smed_0218 243211 - 242822 - | hypothetical protein Smed_0219 243823 - 243362 - | YbaK/prolyl-tRNA synthetase associated region TERM 205 243724 - 243750 + g 81 -15.8 -3.07895 | CGACGCCATGGCCCT GCGCCGCCAGCG CCA CGGTGGCGGTGC TCTGTTCGAGCTCGA TERM 206 243860 - 243907 + r 100 -20 -3.55444 | gap 1, opp_overlap 243867 GAAGAATGTCTTTGA CGACGAATGAGGCGACGTCGCTT AAG GAGCGACA-CGCCTCAATCGTCG TTTGAAGCGTCAAGA TERM 207 243900 - 243867 - R 82 -14 -3.21099 | gap 1, opp_overlap 243860 GTCTTTGACGACGAA TGAGGCGACGTCGCT TAAGG AGCGACA-CGCCTCA ATCGTCGTTTGAAGC Smed_0220 244086 - 243898 - | hypothetical protein TERM 208 244115 - 244154 + r 74 -13.5 -2.60496 | gap 1, overlap 244114 244113 CGTTGACTTGCGATA GCC-GGTCCGCGCTGCCG CGGAC CGGCCGCGCGCATCAGGC CTGTTTAACAACGCG Smed_0221 244403 - 244149 - | transglycosylase-associated protein Smed_0222 245849 - 244557 - | L-rhamnose catabolism isomerase TERM 209 244644 - 244662 + g 73 -8.1 -4.07568 | gap 1 CCGGTATGCCGCAAC CGGC-GCG ATGG CGCCGCCG TTTTCGAGACGGGCC Smed_0223 247962 - 245863 - | short chain dehydrogenase TERM 210 248223 - 248210 - g 72 -2.3 -4.8048 | overlap 248211 GCCGTACAGGAAAAA CCGGT CGCG ACCGT GCCTGAACTCGTCGA Smed_0224 248159 - 248971 + | DeoR family transcriptional regulator TERM 211 249371 - 249336 - g 79 -11.2 -3.86897 | gap 1, opp_overlap 249349, overlap 249313 CTGATCGCTCAGAAA GTCGATGCCATCG-CCG TGT CGGCCAACGACACCGAC GCGCTCGTTCCGGCG Smed_0225 249084 - 250073 + | rhamnose ABC transporter, periplasmic rhamnose-binding protein TERM 212 250238 - 250207 - f 83 -14.4 -3.14344 | opp_overlap 250196 250197, overlap 250235 GAGCGGGCGCAGCAA GCCCCTTCTCCCCG CCTG CGGGGAGAAGTCGC GGCAGCGGGATGAGG Smed_0226 250372 - 251883 + | ABC transporter related Smed_0227 251880 - 252860 + | monosaccharide-transporting ATPase TERM 213 253090 - 253051 - g 79 -9.2 -4.19704 | opp_overlap 253051 253059 253089 CAACTTCACCGAAAA GGCGATGATCGCCTTTGC CATG GCACTGGTGATCATCTCC GGCGAGATCGACCTG Smed_0228 252860 - 253864 + | monosaccharide-transporting ATPase Smed_0229 253875 - 254189 + | L-rhamnose 1-epimerase TERM 214 254414 - 254431 + G 73 -12.7 -3.15579 | ATTTCGGTCACCACC CACGGCG CGAC CGCCGTG TTGCTCGACAGTTCC Smed_0230 254186 - 255577 + | carbohydrate kinase FGGY Smed_0231 255842 - 255618 - | hypothetical protein TERM 215 257607 - 257588 - g 74 -9.2 -3.87815 | GGTCATTTCCATAAA CGAGGCCG TCAC CGGCATCG CACGTGAGGCGGAAT TERM 216 257674 - 257659 - g 70 -10.4 -3.54424 | CCGCAGCCTCGGAAA TCGGCG CGGT CGCCGA GGCGATGAACCGAAG TERM 217 257886 - 257846 - g 100 -18.5 -4.3129 | gap 1, opp_overlap 257882 GACCGACGACCAAAA CGAAATGCCGTTCGG-CG AGGCCG CGTCCGAACGGCACTTCG CCGGATGGCGACGTT Smed_0232 256305 - 257903 + | methyl-accepting chemotaxis sensory transducer TERM 218 258000 - 257957 - g 72 -2.3 -4.74132 | gap 1, overlap 257964 ACACCGCAGGAAAAA CACTGAAGC-TCGCTCCGGT ATTGG ACCTGAACGAGGCAACGGTG CTGCATGAGAGGCTC Smed_0233 257929 - 258222 + | putative chemotaxis protein CheX Smed_0234 258226 - 258591 + | response regulator receiver protein Smed_0235 258611 - 260890 + | CheA signal transduction histidine kinase Smed_0236 260887 - 261363 + | putative CheW protein Smed_0237 261360 - 262283 + | protein-glutamate O-methyltransferase Smed_0238 262280 - 263329 + | chemotaxis-specific methylesterase TERM 219 263376 - 263353 - g 80 -5.2 -4.89567 | overlap 263355 GCCGAAAAGATAAAA GTTCTGATCG TCGA CGATCAGGTC ACGAGCCGGCTGCTG Smed_0239 263329 - 263718 + | response regulator receiver protein Smed_0240 263715 - 264266 + | chemoreceptor glutamine deamidase CheD Smed_0241 264321 - 264698 + | hypothetical protein fliF 264942 - 266615 + | flagellar MS-ring protein TERM 220 266639 - 266673 + F 90 -10.7 -4.56597 | opp_overlap 266642 266646, overlap 266642 GGCAGATCTGCATCA GAAGCAAGTCCCGCT CCGCA GGCGGGCCTTGCTTG TTTTTAACGCGCGCC TERM 221 266642 - 266670 + F 93 -12.4 -4.40561 | opp_overlap 266642 266646, overlap 266639 AGATCTGCATCAGAA GCAAGTCCCGCT CCGCA GGCGGGCCTTGC TTGTTTTTAACGCGC TERM 222 266670 - 266642 - f 76 -11.7 -3.41229 | opp_overlap 266642 266639, overlap 266646 AGATCTGCATCAGAA GCAAGTCCCGC TCCGCAG GCGGGCCTTGC TTGTTTTTAACGCGC TERM 223 267221 - 267211 - f 76 -4.6 -4.77036 | overlap 267212 CGGGAGGATTAAAAA CCCC TTT GAGG ACTCACGCAAATGCG TERM 224 267371 - 267355 - f 75 -5.7 -4.56597 | overlap 267357 GCTTGGTGGCAAAAA TACCGGC GAA GCCGGCT GTCGAGGACGACAGG TERM 225 267369 - 267357 - f 77 -10.5 -3.90048 | overlap 267355 TTGGTGGCAAAAATA CCGGC GAA GCCGG CTGTCGAGGACGACA Smed_0243 267436 - 268173 + | regulatory protein LuxR TERM 226 268750 - 268717 - g 89 -16.7 -3.4072 | GACCTTTGACGAGAA GCGCCCGCTCAAGGC CGAG GCCCTGAGCGATCGC GAAATCTCCTGTCTG Smed_0244 268184 - 268927 + | response regulator receiver protein Smed_0245 269451 - 269011 - | hypothetical protein flhB 270536 - 269454 - | flagellar biosynthesis protein FlhB TERM 227 270700 - 270723 + r 72 -9.5 -3.75718 | opp_overlap 270677, overlap 270698 270701 CGGATACCGGGCAGG GCGGAGGCG TCAGGC CGCCTCCGG TTCCTTTTCCTTGAG TERM 228 270701 - 270722 + r 73 -13 -2.84708 | opp_overlap 270677, overlap 270700 270698 GGATACCGGGCAGGG CGGAGGCG TCAGGC CGCCTCCG GTTCCTTTTCCTTGA fliG 271746 - 270709 - | flagellar motor switch protein G Smed_0248 272481 - 271834 - | flagellar motor switch protein FliN Smed_0249 273448 - 272501 - | surface presentation of antigens (SPOA) protein Smed_0250 274328 - 273450 - | flagellar motor protein MotA Smed_0251 274499 - 275278 + | hypothetical protein TERM 229 275500 - 275479 - g 73 -7.1 -4.30576 | opp_overlap 275497, overlap 275480 TCCTGAGCACGAAAA CCGGAGCGC TCGC GCGCACGGG CTCCGCGCTCGACTT TERM 230 275821 - 275833 + G 71 -9.1 -3.7108 | CCGCTCAACCGGAAC CGGTC GTG GACCG TTTCGATGTCGGCGT flgF 275280 - 276005 + | flagellar basal body rod protein FlgF TERM 231 276895 - 276939 + G 75 -13.4 -3.02144 | TTCGTGAGGTGGCGA CCGCTGCGGGGGAGCCGCCG ATCGC CCGCGGCTATCCCGCATCCG TCTTCACCGAACTGC fliI 276048 - 277451 + | flagellum-specific ATP synthase Smed_0254 277454 - 278026 + | hypothetical protein TERM 232 278315 - 278336 + G 78 -10.1 -4.08216 | opp_overlap 278315 ACACCGGGGTGCAAA TGGCCGCGA CCCA TCGCGCCCA TTTTACCGAGAGTGC flgB 278152 - 278532 + | flagellar basal body rod protein FlgB flgC 278538 - 278957 + | flagellar basal body rod protein FlgC fliE 278957 - 279292 + | flagellar hook-basal body protein FliE flgG 279304 - 280092 + | flagellar basal body rod protein FlgG flgA 280111 - 280620 + | flagellar basal body P-ring biosynthesis protein FlgA TERM 233 281200 - 281212 + G 74 -4.8 -4.56775 | opp_overlap 281150 ACCTCGTGCTGCAGC TCCG CAATC CGGA TTTTTCGACCGCCGT flgI 280617 - 281732 + | flagellar basal body P-ring protein Smed_0261 281729 - 282268 + | hypothetical protein flgH 282265 - 282975 + | flagellar basal body L-ring protein Smed_0263 282992 - 283483 + | flagellar basal body-associated protein FliL fliP 283491 - 284228 + | flagellar biosynthesis protein FliP Smed_0265 284499 - 285686 + | flagellin domain-containing protein TERM 234 285740 - 285763 + F 100 -16 -5.47159 | gap 1, overlap 285758 TTCCGATACTTCGAA CCGCGCCCCGG AAA CCGGG-CGCGG TTTTTGTTTCTTCCA Smed_0266 286024 - 287211 + | flagellin domain-containing protein TERM 235 287249 - 287225 - f 71 -10.7 -3.60006 | AATCAGACGCGGAAA GGCGGTCGC GAACTGA ACGACCGCC ATCCTGACCGACCTT TERM 236 287264 - 287300 + F 100 -26.1 -3.79113 | opp_overlap 287270, overlap 287267 287270 CATCCTGACCGACCT TAACAAGGGCCACGCTC ATC GAGCGTGGCCCTTGTTG TTGTTGTCGGCAAAT TERM 237 287267 - 287297 + F 100 -25.6 -4.02817 | opp_overlap 287270, overlap 287264 287270 CCTGACCGACCTTAA CAAGGGCCACGCTC ATC GAGCGTGGCCCTTG TTGTTGTTGTCGGCA TERM 238 287270 - 287294 + F 100 -21.5 -4.13244 | opp_overlap 287270, overlap 287267 287264 GACCGACCTTAACAA GGGCCACGCTC ATC GAGCGTGGCCC TTGTTGTTGTTGTCG TERM 239 287294 - 287270 - f 100 -21.5 -3.65522 | opp_overlap 287270 287267 287264 GACCGACCTTAACAA GGGCCACGCTC ATC GAGCGTGGCCC TTGTTGTTGTTGTCG Smed_0267 287475 - 288662 + | flagellin domain-containing protein TERM 240 288738 - 288711 - f 76 -6.8 -4.5442 | opp_overlap 288712, overlap 288712 CCCTGAAGGAGAAAA CTCCGCGGTCTC GCAA GGGGCCGCGGAT TTTCGTGCTGGCGCG TERM 241 288712 - 288737 + F 100 -14.7 -4.30576 | opp_overlap 288712 288711 CCTGAAGGAGAAAAC TCCGCGGTCTC GCAA GGGGCCGCGGA TTTTCGTGCTGGCGC Smed_0268 288963 - 289928 + | flagellin domain-containing protein TERM 242 290013 - 289978 - g 100 -11.9 -4.57073 | overlap 289979 CATCGGGTGGAAAAA GGTTGGACCGCGC TGTTGCCCTG GCGCGGTCCAACA CCTTCGCACAAGTTT TERM 243 290012 - 289979 - g 84 -15.4 -3.33922 | overlap 289978 ATCGGGTGGAAAAAG GTTGGACCGCGC TGTTGCCCTG GCGCGGTCCAAC ACCTTCGCACAAGTT Smed_0269 289969 - 290274 + | hypothetical protein Smed_0270 290271 - 290918 + | hypothetical protein TERM 244 291094 - 291109 + G 74 -11.8 -3.41073 | opp_overlap 291094, overlap 291092 GAATGAGGAGACCAA GGCGGC GATC GCCGCC TATTTCAATCCGGTG TERM 245 291109 - 291094 - g 72 -11.8 -3.31157 | opp_overlap 291094 291092 GAATGAGGAGACCAA GGCGGC GATC GCCGCC TATTTCAATCCGGTG motB 290915 - 292108 + | flagellar motor protein MotB Smed_0272 292112 - 293413 + | chemotaxis protein TERM 246 294117 - 294127 + G 76 -8.2 -4.19238 | opp_overlap 294113 294117 GACCGGCGAAAGCGA GCCG GAC CGGC TTTTCCGCTTCGCCC Smed_0273 293410 - 294825 + | chemotaxis protein (motility protein D) Smed_0274 294803 - 295327 + | lytic transglycosylase catalytic TERM 247 295381 - 295358 - f 72 -9.6 -3.67285 | opp_overlap 295351, overlap 295351 295359 AGAACAGAGGGCAAA GCCGCATTGT GGCG ACAATGCGGA CAGAATGTGATCGCA TERM 248 295380 - 295359 - f 73 -13.1 -2.79648 | opp_overlap 295351, overlap 295351 295358 GAACAGAGGGCAAAG CCGCATTGT GGCG ACAATGCGG ACAGAATGTGATCGC Smed_0275 295599 - 296270 + | two component transcriptional regulator TERM 249 297393 - 297408 + G 71 -6.1 -4.2717 | TCATCATCACCGGTT TCGCC GGATCG GGCGA TTTTGGTGAAATCCT flgE 296360 - 297568 + | flagellar hook protein FlgE TERM 250 298970 - 298988 + G 74 -14.6 -2.57344 | opp_overlap 298968, overlap 298969 GTTGATCAGCACAGT CGACGCCA TGA TGGCGTCG CTTCTGGAAGCCGTG flgK 297591 - 299009 + | flagellar hook-associated protein FlgK flgL 299012 - 300064 + | flagellar hook-associated protein FlgL TERM 251 300389 - 300376 - g 84 -4.5 -5.13473 | opp_overlap 300376, overlap 300367 ACGAGACGGAAAAAA TCCGC AAAC GCGAA TCTTCCAACTTCCAA flaF 300102 - 300449 + | flagellar biosynthesis regulatory protein FlaF flbT 300446 - 300895 + | flagellar biosynthesis repressor FlbT flgD 300886 - 301302 + | flagellar basal body rod modification protein fliQ 301309 - 301575 + | flagellar biosynthesis protein FliQ TERM 252 302274 - 302286 + G 74 -4.8 -4.57073 | CCGCCGCGAACTGGA GGAG GAAAG CTCC TTTTTCGGCGCCATG flhA 301717 - 303804 + | flagellar biosynthesis protein FlhA fliR 303801 - 304553 + | flagellar biosynthesis protein FliR Smed_0285 304558 - 304971 + | hypothetical protein Smed_0286 305070 - 305621 + | hypothetical protein TERM 253 305756 - 305721 - f 72 -9.6 -3.73709 | ACAAAATTGGAACAA GCGGGCGGGAAAATGC CTGG GCATCGTTTCGCCCGC GCCCAGCGAAGTGCA Smed_0287 305787 - 306155 + | hypothetical protein TERM 254 306557 - 306532 - g 81 -3.9 -5.06816 | opp_overlap 306532 306533, overlap 306533 AGGTCTCAACAAAAA GTTCGGAGGCG AGGT CATCTCCGAAG TTCTGGTCGAGCAGC Smed_0288 306155 - 306724 + | hypothetical protein Smed_0289 307759 - 306770 - | glycosyl transferase family protein Smed_0290 308111 - 309010 + | methenyltetrahydrofolate cyclohydrolase Smed_0291 310140 - 309037 - | alanine racemase TERM 255 310212 - 310193 - H 86 -6.4 -5.00884 | overlap 310200 ACCTCGTCGAAAAAA GCGAAAAG CCTG CATTTCGC GCCGCAAAACGTTGC TERM 256 310356 - 310378 + H 93 -12.7 -4.40561 | gap 1, overlap 310353 GCGCTTTGACGATCC GCCCGTGGCG TGCC CGCC-CGGGC TTCTTTTTGGGGAGG Smed_0292 310401 - 311759 + | extracellular solute-binding protein TERM 257 311770 - 311795 + F 100 -14.7 -4.78764 | opp_overlap 311770 AGTAAAGTCAGGCAA GGCGGAGGGTG GGGG CACCGTCCGCC TTTTTCCTCGATTTC TERM 258 311795 - 311770 - f 83 -14.7 -3.11999 | opp_overlap 311770 AGTAAAGTCAGGCAA GGCGGAGGGTG GGGG CACCGTCCGCC TTTTTCCTCGATTTC Smed_0293 311839 - 312921 + | binding-protein-dependent transport systems inner membrane component Smed_0294 312923 - 314065 + | binding-protein-dependent transport systems inner membrane component TERM 259 315715 - 315728 + G 72 -4.5 -4.59109 | gap 1, opp_overlap 315714, overlap 315721 ACGAGGTCAAGCTAC CG-GCC TGG GGCGCG TTTTTCGCGCGTCTG Smed_0295 314094 - 315749 + | alpha amylase catalytic region TERM 260 315959 - 315935 - g 76 -9.2 -4.00756 | overlap 315936 GACTCGAGGAAATAA CCGGCGGCGA CATGT TCATCGCCGG CGAGCGGGTCAACGA Smed_0296 315769 - 316857 + | ABC transporter related Smed_0297 316945 - 317373 + | hypothetical protein Smed_0298 319360 - 317540 - | phosphogluconate dehydratase TERM 261 318165 - 318184 + g 72 -4.2 -4.57341 | gap 1, overlap 318152 318170 CTCACAGCCGGCGCC GGCTCGCGT TTG ACGCT-GCC TTTTTCGCCGAGCTT TERM 262 319374 - 319394 + r 74 -6.8 -4.28994 | overlap 319376 ATGGCACATCCTCTT CCGGAGTC CTGAC GACTCCTG TTTTCATCGGTCATC Smed_0299 320156 - 319461 - | 6-phosphogluconolactonase TERM 263 320023 - 320013 - G 86 -8.2 -4.63184 | overlap 320014 AAGCGACTGGAAAAA CGCC TTT GGCG TCGAGCCCCCCGACA TERM 264 320093 - 320127 + g 81 -9.9 -4.18401 | gap 1 CAAGCCTTGCGCCGA CGTCGTCCGCGAGGGC CTCC GCCAGTGCGGACG-CG TTTTCGAATATGTGC Smed_0300 321640 - 320165 - | glucose-6-phosphate 1-dehydrogenase Smed_0301 323156 - 321846 - | FAD dependent oxidoreductase TERM 265 322690 - 322723 + g 72 -2.5 -4.79352 | gap 1 AATCGCTCCGTCATC GCCTCGACATGG TCGCGATAGTC CCGT-TCGAGGC TTTTCTTGTGACTGA Smed_0302 324585 - 323149 - | glutamate--putrescine ligase TERM 266 324041 - 323990 - G 71 -9.2 -3.73068 | gap 1, opp_overlap 324028 CCGGCAATCGAATAA CCCTGGCCGCCGAGGATGGACCGGC CGG ACCGGCCCTTCGGCGGCCGC-AGCG GGTAGTCGGGGTCGT TERM 267 324087 - 324102 + g 70 -10.4 -3.56099 | overlap 324101 GATAGAATTCGATCT CCGGTG CGAC CACCGG TTTCCAGCCCTTCTG Smed_0303 324710 - 325894 + | hypothetical protein Smed_0304 326166 - 326306 + | hypothetical protein TERM 268 328873 - 328821 - g 83 -12.6 -3.83169 | gap 1, overlap 328812 328855 GAGAAATCGACGAAA GAGGTGAGCTCCGGCTCACGCCTCG TCAA CGAAACGGGCGCC-GTGCTCGCCTC GATCAGCGCCGAGAT Smed_0305 326610 - 329135 + | methyl-accepting chemotaxis sensory transducer TERM 269 329197 - 329147 - f 84 -12.5 -3.76393 | gap 1, opp_overlap 329158 ATAGCCGAATTCAAA CGCCGCA-GACTGGGCCGCGCATC CCCG GATGCGCGGCCCTTTCATTTGACG GCGCTTCCGCAGGAA TERM 270 329158 - 329185 + F 100 -22.8 -4.05788 | opp_overlap 329147 CAAACGCCGCAGACT GGGCCGCGCATC CCCG GATGCGCGGCCC TTTCATTTGACGGCG TERM 271 329395 - 329424 + F 81 -2.8 -5.28176 | overlap 329370 TGCCATCATGTCCAT GGTGATGCTC CTTCATGTTC GGGCATCCCC TTTTTTATGCATCCG Smed_0306 329484 - 330359 + | LysR family transcriptional regulator Smed_0307 330789 - 330550 - | hypothetical protein TERM 272 330853 - 330898 + r 83 -13.3 -3.44146 | gap 1, overlap 330855 TTCAGTTTCGAGGTC TGGTTCGGGACGCGCGGC GGGGCAGGGGG GCCGCGCGTCCCGC-CCG TTCATTCTGCCGCCG TERM 273 330855 - 330897 + r 78 -14.8 -2.66274 | overlap 330853 CAGTTTCGAGGTCTG GTTCGGGACGCGCGGC GGGGCAGGGGG GCCGCGCGTCCCGCCC GTTCATTCTGCCGCC Smed_0308 332189 - 330900 - | isocitrate lyase Smed_0309 332417 - 333829 + | hypothetical protein TERM 274 334456 - 334438 - g 70 -7.4 -4.01071 | ACAAGATGAAGGAAA TTCTCGGC ACC GACGAGAA GCCGAACTGGGATGT Smed_0310 334002 - 335096 + | extracellular solute-binding protein TERM 275 335136 - 335111 - f 87 -15.5 -3.27766 | opp_overlap 335111, overlap 335100 335098 AAGAGCGGAGACGAA TTGCCCGGACC GTAA GATCCGGGCAA TTTTCTTGGAGCAGG TERM 276 335111 - 335136 + F 100 -13.3 -4.63218 | opp_overlap 335111 335100 335098 AAGAGCGGAGACGAA TTGCCCGGACC GTAA GATCCGGGCAA TTTTCTTGGAGCAGG Smed_0311 335252 - 336394 + | spermidine/putrescine ABC transporter ATPase subunit Smed_0312 336399 - 337310 + | binding-protein-dependent transport systems inner membrane component TERM 277 337559 - 337599 + G 76 -10.2 -3.95435 | overlap 337553 GCTGGGAACGATGGC CGCGCTCGCGCTGGTGCG CTACA CCCGCTTCCGCGGGCGCG TTCTCTTTTCCGGCA TERM 278 337832 - 337874 + G 76 -8.3 -4.11692 | overlap 337851 CGCGACGCCGGTCAG GACCTTCTTCGCGATCACC CTGCC GGTGATCGCCCCGGCGGTC TTTTCCGGCTGGATA Smed_0313 337314 - 338135 + | ornithine carbamoyltransferase Smed_0314 339966 - 338140 - | AsmA family protein TERM 279 338619 - 338635 + g 76 -5.7 -4.59773 | opp_overlap 338619 CGAACCGGTCGAGAA CGGCGGC GAA GTCGGCG TTTTTGAGGCTCGCC TERM 280 339031 - 339045 + g 70 -10 -3.54129 | GCCGCCAATGGCCAG CTGGAG GTC CTCCAG TTTCAACGCCGTCTC TERM 281 340057 - 340086 + H 100 -12.2 -4.42806 | opp_overlap 340034 340049 GATGGAATGTCGCCG CAGCGACGATGC CGAGCC GCATCCTCGCTG TTTGTTTCGCGCTGC TERM 282 340463 - 340416 - g 73 -8.5 -4.08692 | gap 3, opp_overlap 340429 340431, overlap 340417 CAACTTTGCCGAAAA TCTGCTGCGCAAGA-C-GGGCAGC GGT GCCGCCCTGATCTTCCGCGGC-GA GGACAAGGTGAGCTA TERM 283 340640 - 340672 + G 93 -18.5 -3.3785 | overlap 340663 TAGGCGCCATATGGT CGTCCTGCTCGCC CGATTTC GGCGAGCAGGGCG TTCTCGATCGCTTCG TERM 284 341808 - 341827 + G 85 -10 -4.26076 | CGGCCAGGACTGGGA GGATGACG TCCG CGTCGTCC TTTTCGTGCGGCTGG TERM 285 341903 - 341889 - g 100 -10 -5.00138 | CAGGGAAATCAAAAA CCGGAT TCG ATCCGG CGCCTCGCCGCGGCA Smed_0315 340138 - 342090 + | acetoacetyl-CoA synthetase TERM 286 342128 - 342151 + T 72 -4.5 -4.69053 | gap 1, opp_overlap 342086, overlap 342130 342130 TCCGCTCAGCAGGGT GTC-GCTCCC GAAGG GGGAGCCGTC TTTTCTTCGCTGCTC Smed_0317 344122 - 342410 - | binding-protein-dependent transport systems inner membrane component TERM 287 343689 - 343673 - G 71 -10.9 -3.53012 | overlap 343681 GCGGCTCGTCTGAAA TCCGAAG AGG CTTCGGA CCAGCCCCTGGACGG TERM 288 344352 - 344302 - R 74 -8.2 -4.11692 | gap 1, opp_overlap 344305 CAGGCATTCGTAAAA GCCGCCCGAGCAAACAGGCCGCC CGCTTC AGCAACCCGTATGC-CGGGCATC TTTCCGCCAGGGCCA Smed_0318 347796 - 344380 - | PAS/PAC sensor signal transduction histidine kinase TERM 289 346369 - 346392 + g 86 -11.6 -4.18018 | opp_overlap 346383 346384 CTTCTGCGCCGGCGC GCGGTCGAGC GAAA GCCCGGCCGC TTTTGCGTCCGGAAC TERM 290 346780 - 346807 + g 74 -4.7 -4.60797 | overlap 346773 346781 TTCGCGGCGCTGGTC CGCTTCGACCG CATTTT CGGACGAGGCC TTTTCTGTCTCGCGC TERM 291 346961 - 347019 + g 84 -17.2 -2.78384 | GTTGCTGCCGTCTCC CCGGCGGGAGCGCGCTCGGAGCCGTCAA GCT TTGCCGGCGCCTGGTCCGTCTCCGCCGG TGTCGTGGACGAAGG TERM 292 347871 - 347889 + H 73 -11.6 -3.40597 | opp_overlap 347871, overlap 347872 GCGAGGGTCCAGCAA CGGCGCCG TCT CGGCGGCG TCTTTCGGTGCGGAA TERM 293 347872 - 347891 + H 72 -9.2 -3.64703 | opp_overlap 347871, overlap 347871 347890 CGAGGGTCCAGCAAC GGCGCCGT CTCG GCGGCGTC TTTCGGTGCGGAAGG TERM 294 348010 - 347991 - H 72 -6.4 -4.28548 | gap 1, overlap 347992 AGTCATCCATCAAAA CGGCGCCTC TAA GAGG-GCCA CACCAAGGAGCGCAT Smed_0319 348029 - 348475 + | phasin TERM 295 348510 - 348533 + T 95 -11 -4.75372 | CGGAACCGATGTAGG GACCGGGTGG CTTG CTATCCGGTC TTTTTGCTGGATAAT Smed_0320 349633 - 348806 - | response regulator receiver protein TERM 296 349652 - 349672 + H 74 -13.9 -2.6348 | opp_overlap 349638, overlap 349651 ACCCTCGTTTCCCCA GGGGCACGG CGG CCGCGCCCC CTTATCACCTTTGGA TERM 297 349865 - 349911 + G 76 -8.7 -4.18018 | gap 1, opp_overlap 349862 349863 GCACGGAAAAATCGC GCTCATCAGCGGCG-GAGCA GGCGGATG TGGTCTCGCCGCTGCCGAGC TTTTCGCTCGAGAGG Smed_0321 349836 - 350603 + | short-chain dehydrogenase/reductase SDR Smed_0322 350614 - 351852 + | FAD-linked oxidoreductase Smed_0323 352770 - 351889 - | LysR family transcriptional regulator Smed_0324 352885 - 354381 + | methylmalonate-semialdehyde dehydrogenase TERM 298 354409 - 354428 + F 100 -8.5 -5.4505 | TCTCCTCCTCGACTG GGGCCTC CTTCGC GGGGCCC TTTTTTGTTGCGCGA TERM 299 355038 - 355052 + G 74 -9.2 -3.93236 | overlap 355030 355040 TTCGACTTTGCCGGC CGCGCC GGC GGTGCG TTTCTGGCGTTCATC Smed_0325 354591 - 355709 + | hypothetical protein Smed_0326 355699 - 356760 + | peptidase M48 Ste24p TERM 300 356788 - 356820 + T 79 -12.8 -3.22388 | gap 1, opp_overlap 356794, overlap 356794 CTCGCCGGGACAAAA CGA-AAACAGCGGGC ATGG GCCCGCTGTCTCTCG TTCGTCAGTTCAGTC TERM 301 356794 - 356813 + T 85 -15 -3.02096 | opp_overlap 356794, overlap 356788 GGGACAAAACGAAAA CAGCGGGC ATGG GCCCGCTG TCTCTCGTTCGTCAG TERM 302 356813 - 356794 - T 100 -15 -4.73108 | opp_overlap 356788 356794 GGGACAAAACGAAAA CAGCGGGC ATGG GCCCGCTG TCTCTCGTTCGTCAG Smed_0327 357879 - 356839 - | extracellular solute-binding protein TERM 303 357281 - 357327 + g 72 -2.2 -4.81249 | gap 3, overlap 357262 357282 357283 GCCTGATCGCGGTCG CCGC-CGTCCGGCTTCCGGG-CA AGAT TGTCCCTGAGGCCGG-CGAGCCA TTTTTCCGTTTCGGC TERM 304 357509 - 357492 - G 70 -12.7 -2.91264 | CCTTGGAGGCATAGA CGACGCG GCCG CGCGTCG TCAGGCCGAACCAAT TERM 305 358085 - 358070 - g 82 -3.2 -5.14965 | ATCCGGAGTAAAAAA TGCGTC TGAC GAAGCA AACCAACTACGCAGT TERM 306 358407 - 358419 + G 76 -6.2 -4.60889 | overlap 358395 TGCCGCGCTGCGCAA GGCG CTGAA CGCC TTTTTCGAAGTGCTT TERM 307 358505 - 358533 + G 72 -7.3 -4.17491 | overlap 358506 358508 358528 TCGGACTGGAAGAGC CCACGCGGCCG CAGACGT CGGCCGCCTGA TTTTCGGCATTTGGT rirA 358069 - 358533 + | iron-responsive transcriptional regulator TERM 308 358552 - 358589 + F 100 -27.9 -4.86731 | opp_overlap 358552 358555, overlap 358556 TCGGCATTTGGTAAA CAAGGCGGGATGGGCGG TTTT CCGCCCATCCCGCTTTG TTTTGTTTGAGCGGC TERM 309 358589 - 358552 - f 100 -25.7 -3.55444 | opp_overlap 358552 358556, overlap 358555 TCGGCATTTGGTAAA CAAGGCGGGATGGGCGG TTTT CCGCCCATCCCGCTTTG TTTTGTTTGAGCGGC TERM 310 358586 - 358555 - f 100 -21.6 -3.91716 | opp_overlap 358552 358556, overlap 358552 GCATTTGGTAAACAA GGCGGGATGGGCGG TTTT CCGCCCATCCCGCT TTGTTTTGTTTGAGC TERM 311 358556 - 358585 + F 100 -25.1 -4.96996 | opp_overlap 358555 358552, overlap 358552 CATTTGGTAAACAAG GCGGGATGGGCGG TTTT CCGCCCATCCCGC TTTGTTTTGTTTGAG Smed_0329 358968 - 360563 + | extracellular solute-binding protein TERM 312 360579 - 360616 + F 100 -14.9 -4.59773 | gap 1, overlap 360580 360584 TCTTATCGACTGATC CGAAG-GGGGCGTTTGCC GCT GGCGAGCGCCCCTCTTCC TTTTTGCCAGTGCCG TERM 313 360580 - 360615 + F 100 -18.4 -3.35542 | gap 1, overlap 360579 360584 CTTATCGACTGATCC GAAG-GGGGCGTTTGCC GCT GGCGAGCGCCCCTCTTC CTTTTTGCCAGTGCC TERM 314 360584 - 360610 + F 95 -18 -3.48505 | overlap 360580 360579 TCGACTGATCCGAAG GGGGCGTTTGCC GCT GGCGAGCGCCCC TCTTCCTTTTTGCCA TERM 315 361083 - 361100 + G 74 -5.5 -4.46212 | overlap 361031 TGGGCACCGCGCTCG TCGGCTT CTCG ATGCCGA TTTTCTGGTGGGGCC Smed_0330 360668 - 361672 + | nickel-transporting ATPase TERM 316 362041 - 362056 + G 71 -8.2 -3.9122 | overlap 362042 CCGGCGGCATTCTGG TCGGCG TCAT CGCCGG TTATTTCCGCGGATG Smed_0331 361683 - 362591 + | binding-protein-dependent transport systems inner membrane component Smed_0332 362593 - 363447 + | ABC transporter related Smed_0333 363444 - 364271 + | ABC transporter related Smed_0334 364338 - 364682 + | endoribonuclease L-PSP TERM 317 364720 - 364744 + F 100 -20.7 -4.25104 | GCGCTCCATCTTCTC CGCCGTCGGCC CCT GGCCGGCGGCG TTTTGCTGCCGGCCG Smed_0335 364834 - 365004 + | hypothetical protein Smed_0336 365106 - 366236 + | hypothetical protein Smed_0337 367116 - 366319 - | two-component response regulator Smed_0338 367354 - 367548 + | hypothetical protein TERM 318 367651 - 367691 + T 100 -30.1 -2.82933 | opp_overlap 367658 367679, overlap 367650 367656 CTGCGAACGGTAATG TGGAACAGTTCCGCTTTCC GAG GGAAAGCGGAACTGTTCCA TCTCGTCAATTCGAG TERM 319 367656 - 367686 + T 100 -22.8 -3.14647 | opp_overlap 367658 367679, overlap 367650 367651 AACGGTAATGTGGAA CAGTTCCGCTTTCC GAG GGAAAGCGGAACTG TTCCATCTCGTCAAT TERM 320 367684 - 367658 - T 100 -19.6 -3.06261 | opp_overlap 367650 367656 367651, overlap 367679 CGGTAATGTGGAACA GTTCCGCTTTCC GAG GGAAAGCGGAAC TGTTCCATCTCGTCA Smed_0339 367992 - 367744 - | 17 kDa surface antigen TERM 321 368211 - 368200 - H 79 -7.2 -4.57569 | TTATTGTCGCAAAAA CGCC GGTT GGCG CCATTTGTTCCGCGC TERM 322 368220 - 368245 + H 73 -11.1 -3.43604 | gap 1, overlap 368230 GTTGGCGCCATTTGT TCCGCG-CCGCG GGA CGCGGGCGCGCA TTCCTGTTGTCGTAT TERM 323 368299 - 368339 + H 71 -6.8 -4.18737 | overlap 368287 368302 368303 TCGCGGACGCGCGTT CGGTTTGCTCCAACGTCT CGAGC AGACGCTGGAGCCGGTTG TTATATTTTTGTTCC TERM 324 368302 - 368336 + H 71 -7.1 -4.15932 | overlap 368299 368303 CGGACGCGCGTTCGG TTTGCTCCAACGTCT CGAGC AGACGCTGGAGCCGG TTGTTATATTTTTGT Smed_0340 368390 - 368584 + | hypothetical protein TERM 325 368653 - 368664 + F 70 -3.6 -4.56914 | CCGGGAACAAAGGCT TGCG GGCG CGCG TTTTGATTTCGGTAG Smed_0341 368700 - 368864 + | hypothetical protein TERM 326 368936 - 368912 - f 81 -12.9 -3.51825 | opp_overlap 368912 GTATTCGAACGACAA GGGGTGGAG CTCTCGT CTCCACCCC TTTCCAGTTGCGGTT TERM 327 368912 - 368936 + F 84 -12.9 -3.66921 | opp_overlap 368912 GTATTCGAACGACAA GGGGTGGAG CTCTCGT CTCCACCCC TTTCCAGTTGCGGTT Smed_0342 369055 - 370308 + | FAD dependent oxidoreductase Smed_0343 371293 - 370334 - | periplasmic binding protein/LacI transcriptional regulator Smed_0344 372366 - 371323 - | monosaccharide-transporting ATPase Smed_0345 373178 - 372363 - | ABC transporter related TERM 328 372790 - 372780 - G 71 -8.2 -3.85698 | CGCCTTGTCGAGAAA GCCG AGG CGGC CCATCAGACCGGGGG Smed_0346 374566 - 373223 - | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase TERM 329 373768 - 373808 + g 84 -15.5 -3.29461 | overlap 373769 TTGTGATACCCCATT CCTGTTCAAGGTCCTGCAG CGC CTGCACGACCTTGATCAGC TTCTCGACGGCATTG TERM 330 373769 - 373807 + g 87 -19 -2.57463 | overlap 373768 TGTGATACCCCATTC CTGTTCAAGGTCCTGCAG CGC CTGCACGACCTTGATCAG CTTCTCGACGGCATT TERM 331 374568 - 374579 + H 84 -2.2 -5.40072 | ACTGATGAGTGCATG TCTG ATCC CAGG TTTTTTTCCCGCAGG TERM 332 374713 - 374699 - H 87 -7.1 -4.87626 | overlap 374701 TGTCAACAGGAAAAA TCGCC TTCGT GGCGA GGCATGGGAGGTCGG Smed_0347 375017 - 375265 + | hypothetical protein Smed_0348 375849 - 375292 - | MgtC/SapB transporter TERM 333 375951 - 375915 - R 100 -24.6 -3.70853 | gap 1 GCAATGATGGAAGAA GAGCGGGATGC-GGCGG CAGA CCGCCTGCATCCCGCTC GCGTCCGGACTACTG Smed_0349 376404 - 375961 - | hypothetical protein TERM 334 376024 - 376070 + g 80 -14.3 -3.14132 | CGTTTCGGGTGCTGC CGGCGGTGCTGCCGGCGTCTG CGTGT CAGGCGCGGCCGGCGCTGTCG TTCCTCCGGCGGGCG TERM 335 376513 - 376497 - H 72 -9.3 -3.65902 | overlap 376498 GCCACCGCACGTAAA GCGCGGC CTC GCCGCGG CGCAGACGGCGCACG TERM 336 376512 - 376498 - H 73 -12.8 -2.79327 | overlap 376497 CCACCGCACGTAAAG CGCGGC CTC GCCGCG GCGCAGACGGCGCAC TERM 337 376824 - 376846 + G 72 -4 -4.67234 | overlap 376825 376826 CGTTGTGCTGCTGAC TTCGATCGTC ATC GCCGATCGGC TTTTTGGAATTGACT Smed_0350 376714 - 377373 + | hypothetical protein TERM 338 377747 - 377721 - g 76 -7.9 -4.2558 | gap 1 GAGCGGGGATGAAAA GCAGCGGCAGGC CTTC GTC-GCCGCCGC CACCGAAGCACTGCA Smed_0351 377410 - 377850 + | hypothetical protein Smed_0352 378104 - 377865 - | putative transmembrane protein Smed_0353 378878 - 378111 - | protein of unknown function DUF899 thioredoxin family protein TERM 339 378340 - 378352 + g 70 -10.5 -3.63895 | GCGGCGATCTCGGCG GCCGG CCC CCGGC TTTCGCCTGGTTCGA TERM 340 379281 - 379271 - g 73 -6.8 -4.25104 | overlap 379272 GCTGGCCCACGAAAA CGCT CGA AGCG GCGAGGGCAACGCTC Smed_0354 379000 - 380241 + | hypothetical protein Smed_0355 380277 - 380921 + | hypothetical protein TERM 341 381150 - 381138 - f 78 -9.1 -4.16284 | opp_overlap 381137 381136 ATAGGCCGGAACAAA GCCTG CAG CAGGC GATTCCTCCACTTGA Smed_0356 381192 - 381560 + | hypothetical protein Smed_0357 382363 - 381902 - | hypothetical protein Smed_0358 382662 - 383105 + | S-isoprenylcysteine methyltransferase-like protein TERM 342 383149 - 383134 - g 78 -3.2 -5.00616 | opp_overlap 383134 CTGCTGTCGAAAAAA CGCTCA TGCG TCAGCG CTTTGTGATGGCGGC Smed_0359 383109 - 383690 + | TetR family transcriptional regulator Smed_0361 384863 - 385834 + | hypothetical protein Smed_0362 385890 - 386363 + | putative tricarboxylic transport membrane protein TERM 343 386442 - 386452 + G 71 -8.2 -3.9461 | overlap 386440 GAACCTCATCTACGC CGCC ATT GGCG TTCTTATTGGAACGG Smed_0363 386374 - 387873 + | hypothetical protein Smed_0364 388023 - 388841 + | GntR domain-containing protein TERM 344 388922 - 388906 - f 70 -4.4 -4.46212 | opp_overlap 388906, overlap 388886 TTTGCTATCATAAAA TGCAGA TGACC CCTGCA CTTGGTCCTTGTCTA acnA 388975 - 391593 + | aconitate hydratase Smed_0366 392841 - 391945 - | LysR family transcriptional regulator Smed_0367 392937 - 393257 + | hypothetical protein Smed_0368 393257 - 394036 + | short chain dehydrogenase Smed_0369 394523 - 394056 - | MarR family transcriptional regulator Smed_0370 394667 - 395449 + | hypothetical protein TERM 345 395584 - 395558 - f 80 -9.4 -4.21462 | opp_overlap 395557 395556, overlap 395559 AGCCAGTATGGAAAA CCGTCGATCTCC CAT GGAGATCGATCG CGCCTTTGAGCCGTT TERM 346 395584 - 395559 - f 76 -12.7 -3.12395 | gap 1, opp_overlap 395557 395556, overlap 395558 GCCAGTATGGAAAAC CG-TCGATCTCC CAT GGAGATCGATCG CGCCTTTGAGCCGTT TERM 347 396834 - 396823 - g 72 -7.2 -4.13767 | overlap 396824 TTGCGCAGCCGAAAA GCCG TGGC CGGC TGAGGCTCTCCGGCC Smed_0371 395655 - 397283 + | glucose-methanol-choline oxidoreductase TERM 348 397898 - 397861 - f 85 -3.1 -5.40072 | gap 1, opp_overlap 397890, overlap 397862 CTTTTGCCAAAAAAA TGCGGCCGCGCTGTGTCG GAC CGCCTC-GCGCGCACGCC GAACGGTGCCGTCCC TERM 349 398536 - 398594 + G 83 -14.3 -3.53444 | gap 1, overlap 398534 GCAGTCGCGCGCGGA GCGGC-CGGGCGGTCAACCCGGTGCGCC CTTC GTCGCGCCAAGCGAACCGCCCGCGCCGC TTTACGCGGCGCTCG Smed_0372 398129 - 399658 + | Ppx/GppA phosphatase Smed_0373 399655 - 400392 + | ribosomal RNA methyltransferase RrmJ/FtsJ Smed_0374 400396 - 400779 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 350 400970 - 400953 - T 80 -14.1 -2.83345 | overlap 400950 CGCAGAGATGAAGCA GCGCCGC GTCT GCGGCGC GGGAAAAGCCGTTTT Smed_0375 401955 - 401023 - | transposase IS116/IS110/IS902 family protein Smed_0376 402469 - 403326 + | transposase IS116/IS110/IS902 family protein Smed_0377 404787 - 403375 - | EmrB/QacA family drug resistance transporter TERM 351 404353 - 404341 - G 76 -10.5 -3.86524 | overlap 404342 ATAGGTGGTGATAAA GCCGC CGA GCGGC GGGCCTGCAAGCGGG TERM 352 404801 - 404849 + H 90 -11.7 -4.1891 | opp_overlap 404812 ATGAATGATGCCTGG GGGTTAGAGCACTTCCGCTTTTC TCC GAATCGCGGAAACTCTCTAACCC TTTGTATTGCCGCAA Smed_0378 405136 - 406116 + | beta-lactamase domain-containing protein TERM 353 406147 - 406181 + F 72 -9.9 -3.75332 | opp_overlap 406146, overlap 406149 CGCTGCGACAACATT TCGCCGGGGCCCTGA CAGAT TCGGGCCTCCGGCTA TTTCCATTCCGACAT TERM 354 406149 - 406179 + F 79 -12.5 -3.46068 | opp_overlap 406146, overlap 406147 CTGCGACAACATTTC GCCGGGGCCCTGA CAGAT TCGGGCCTCCGGC TATTTCCATTCCGAC Smed_0379 406307 - 407809 + | inositol-5-monophosphate dehydrogenase Smed_0380 407887 - 408303 + | hypothetical protein Smed_0381 408389 - 409264 + | carboxymethylenebutenolidase Smed_0382 410218 - 409265 - | LysR family transcriptional regulator TERM 355 409603 - 409570 - G 76 -8.8 -4.19238 | overlap 409571 CGCCGAAGCTCAAAA GTTGCCGCCTGCCG GCGCTA CTGCAGACGGCAAG AGCCTGGTCGCGCAG TERM 356 409602 - 409571 - G 70 -12.3 -3.11222 | overlap 409570 GCCGAAGCTCAAAAG TTGCCGCCTGCCG GCGCTA CTGCAGACGGCAA GAGCCTGGTCGCGCA TERM 357 409790 - 409736 - G 100 -15.8 -4.18094 | gap 3, overlap 409725 409738 GAAACGATCGGAAAA CAGCGATCG-GGTGGCGATGCC-GTCG GGCT CGACCGGCAGCGCCGCCACGACCGC-G TCGAGCCTGCCGTCG TERM 358 409789 - 409738 - G 100 -19.5 -3.68036 | gap 2, overlap 409725 409736 AACGATCGGAAAACA GCGATCG-GGTGGCGATGCC-GTCG GGCT CGACCGGCAGCGCCGCCACGACCGC GTCGAGCCTGCCGTC Smed_0383 410335 - 411819 + | catalase TERM 359 411873 - 411841 - T 100 -21.4 -4.56597 | opp_overlap 411841 411845 CCGGTCGGCGAAAAA CGAAGGCCACGCCC ATGCA GGACGTGGCCTTCG TCATTGAGGAGAGGA TERM 360 411841 - 411873 + T 100 -19.2 -2.70932 | opp_overlap 411841, overlap 411845 CCGGTCGGCGAAAAA CGAAGGCCACGCCC ATGCA GGACGTGGCCTTCG TCATTGAGGAGAGGA TERM 361 411845 - 411869 + T 79 -12.8 -3.27298 | opp_overlap 411841, overlap 411841 TCGGCGAAAAACGAA GGCCACGCCC ATGCA GGACGTGGCC TTCGTCATTGAGGAG Smed_0384 412853 - 411903 - | LysR family transcriptional regulator TERM 362 412995 - 413028 + H 83 -9.5 -4.258 | GCCAGATTTTCTCGA CCTGCTCCCGCGTAG ACTT TTGCGCGAGAGAAGG TTTCTTCGTGCCTGC Smed_0385 413060 - 413356 + | hypothetical protein TERM 363 413504 - 413533 + T 100 -18 -5.26316 | TAGACCCTGCTGCTT GCCCGGTACATG CCAAGA CATGTACCGGGC TTTTTTGTAGCGTGG Smed_0386 414505 - 413660 - | hypothetical protein Smed_0387 415988 - 414615 - | glutamate--cysteine ligase TERM 364 414730 - 414742 + g 71 -9.1 -3.76402 | ACCTCATCGAGCGGT GCCAG GAA CTGGC TTTCGTCGATGCCGT Smed_0388 416885 - 416148 - | hypothetical protein TERM 365 416304 - 416290 - G 78 -7 -4.56597 | overlap 416292 TCCGTCTCGGAAAAA CCGCCC TCC GGGCCG ATCAGAAGTGCCAGC TERM 366 416476 - 416521 + g 71 -12.6 -3.0814 | AGGACGCCGCACTGC TCGGCCGCTTCGATGGCATT GGCGCG AATGCGTTCGAGGCTGCCGA TCTTCCCCTGTACAT Smed_0389 418409 - 416904 - | phosphate transporter Smed_0390 419118 - 418612 - | NUDIX hydrolase Smed_0391 420249 - 419392 - | GntR domain-containing protein TERM 367 420721 - 420734 + G 72 -4.5 -4.56597 | overlap 420723 CAGGTGCCGATTCAT CCGTT CGGC GACGG TTTTTCGCCGCCGGG Smed_0392 420394 - 421662 + | hypothetical protein Smed_0393 422578 - 421682 - | LysR family transcriptional regulator Smed_0394 422685 - 424124 + | D-lactate dehydrogenase (cytochrome) Smed_0395 424121 - 425338 + | FAD linked oxidase domain-containing protein TERM 368 425655 - 425645 - g 76 -8.2 -4.10657 | GGACATGCTCGAAAA CGGC CGT GCCG CGGATACCGAAACCG Smed_0396 425463 - 426755 + | hypothetical protein Smed_0397 427566 - 426880 - | ErfK/YbiS/YcfS/YnhG family protein Smed_0398 428496 - 427756 - | ErfK/YbiS/YcfS/YnhG family protein TERM 369 428984 - 428967 - g 71 -8.4 -3.88291 | overlap 428968 GACGATCCTGAGAAA GCGCGA GGCGTT TCGCGC CGCATTCGCGGGCTT Smed_0399 428776 - 429411 + | DNA-3-methyladenine glycosylase I TERM 370 429433 - 429459 + T 100 -15.9 -3.72576 | gap 1, opp_overlap 429430 CGTCGGAGACGAGCG GCGCCCTCC-CC AACG GGAGGAGGGCGC TTTGGTGGGAAAGGC Smed_0400 430932 - 429481 - | permease for cytosine/purines uracil thiamine allantoin TERM 371 430251 - 430273 + g 100 -13.4 -4.27117 | CGGCGAGTGATCCCG GAACGCCGGG CAC CCCGGCATTC TTTGTCTTCTCCAGC Smed_0401 431568 - 431188 - | hypothetical protein Smed_0402 432529 - 432104 - | hypothetical protein TERM 372 432459 - 432438 - G 75 -13.7 -3.09516 | gap 1, opp_overlap 432429 GGTTCCACCAGGCAA CCCGCCTGCG AGA CGC-GGCGGG TCCAGGCTTCGTGGG TERM 373 432614 - 432645 + H 73 -12.2 -3.06696 | gap 1 AAGTCATTTGTAGCC GCGCCGTTGGC-CCG GAA CGGAGGCGGCGGCGC TATGTTCCGAAAGGG TERM 374 432807 - 432780 - g 83 -4.8 -5.0095 | gap 1, opp_overlap 432795 AAAAACAGAAGAAAA CGCAG-AAGCTCA GGG CGCGCTTGCCGCG TGGTTTCGTAGATCG TERM 375 432902 - 432914 + G 72 -2.6 -4.7173 | overlap 432900 TACGGCTTCGATCCG GTGG AAACC CCGC TTTTTGAATATACTG TERM 376 433810 - 433822 + G 81 -10.5 -4.18494 | overlap 433812 CATGGGACAGCCGGT GCCGG CGA CCGGC TTTTCGATCGGCGTG TERM 377 433942 - 433954 + G 74 -9.1 -3.87373 | CATCGAAAGCATGGG GCGCT ACC AGCGC TTTGTGCAGGATCTG hisS 432749 - 434272 + | histidyl-tRNA synthetase hisZ 434278 - 435411 + | ATP phosphoribosyltransferase regulatory subunit hisG 435408 - 436103 + | ATP phosphoribosyltransferase catalytic subunit Smed_0406 436224 - 436931 + | glutathione S-transferase domain-containing protein Smed_0407 436959 - 438239 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 378 438309 - 438288 - T 100 -17.3 -5.05505 | opp_overlap 438288 ACCATAAATCAAAAA GGGGCGGCT CGAG AGCCGCCCC TTTGATCCGGATGGA TERM 379 438288 - 438309 + T 100 -17.3 -3.73775 | opp_overlap 438288 ACCATAAATCAAAAA GGGGCGGCT CGAG AGCCGCCCC TTTGATCCGGATGGA groEL 440197 - 438560 - | chaperonin GroEL groES 440571 - 440275 - | co-chaperonin GroES TERM 380 440449 - 440461 + g 74 -5.5 -4.41494 | GACAGCCACGATTTC GCCTT CCT GAGGC TTTTCCTTCGCGGTG Smed_0410 440876 - 441724 + | HAD family hydrolase TERM 381 441716 - 441744 + F 73 -3 -4.72272 | TGGTGGATGCCGCGG CTGGCATGACGG GAAGA TCGGCATGACGG TTTTTCATCGCAACG TERM 382 442471 - 442522 + G 89 -14.5 -3.95456 | overlap 442517 ACGATGGCGTTGCGA GTTTCGGGCGGCGCC-CGACCGTCG ACAG TGACGG-CGAGGCCCTGCTCGAGAC TTTCGTGTTCGATTT Smed_0411 441738 - 442721 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 383 442867 - 442908 + F 70 -12.4 -2.76261 | overlap 442865 442865 442866 TCAGCGAATTATTGG CCCGG-CTTTCCGCGCGC TTTAGTCT GCGC-CGGAAGGTCCGGG ATTTCGGCGTTCCAG TERM 384 443157 - 443140 - g 75 -3.3 -4.84359 | gap 1, overlap 443125 GGAGCTTTACAAAAA GCTGCGCG CAT CG-GCTGC CGGCCGCGAGAAGTT TERM 385 444926 - 444886 - g 74 -13.3 -3.28712 | GCGCGCGCCGTATAA CGCCGTCATCACCCATGGC TTC ACCATGGATGAGAAGGGCG AGAAGATGTCGAAGT TERM 386 445624 - 445601 - g 77 -4.5 -4.87291 | gap 1 GAGCGCAAGGAAAAA CGCATCG-GC TCTTC GCTCGAGGCG GCTCCCGTCGTCCAC ileS 443003 - 445912 + | isoleucyl-tRNA synthetase Smed_0413 446046 - 446666 + | hypothetical protein Smed_0414 446739 - 447218 + | GCN5-related N-acetyltransferase Smed_0415 448164 - 447715 - | CMP/dCMP deaminase zinc-binding Smed_0416 448238 - 449968 + | pseudouridine synthase Smed_0417 449975 - 450535 + | putative methyltransferase Smed_0418 450625 - 451509 + | patatin Smed_0419 452396 - 451719 - | porin Smed_0420 454855 - 452990 - | potassium efflux system protein Smed_0421 454976 - 456322 + | peptidase U62 modulator of DNA gyrase TERM 387 457153 - 457169 + G 86 -15.1 -3.63627 | CGACCTCATTCTTTC GCGCGCC GGC GGCGCGC TTTGCGGTCTCGACA Smed_0422 456479 - 457297 + | inositol monophosphatase Smed_0423 457358 - 457594 + | hypothetical protein TERM 388 458663 - 458673 + G 71 -8.2 -3.90744 | GGAACCGGCTATGCT CGGC TGC GCCG TTCTTTCGGGCGGGA TERM 389 458934 - 458915 - g 84 -16.4 -3.05384 | CCCGCTGGTAGTGAA GGCGCGGC TGGA GCCGCGCC CAAAGCCCGAAGCCT Smed_0424 457632 - 458951 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 390 459464 - 459452 - g 81 -10.5 -4.20516 | opp_overlap 459443 459441 459460, overlap 459436 CGGCTACGGAACAAA GCCGG AGC CCGGC ATGGTGCTCGGATTT Smed_0425 458976 - 459677 + | HAD family hydrolase lpxK 459818 - 460858 + | tetraacyldisaccharide 4'-kinase Smed_0427 461195 - 460962 - | hypothetical protein mutL 463103 - 461286 - | DNA mismatch repair protein TERM 391 463977 - 463957 - g 78 -3.2 -5.0916 | CTCGGAACAGAAAAA GCGCGA CGAACATTT CCGCGC CGATCTCGAGCGGAT Smed_0429 463541 - 465280 + | putative PAS/PAC sensor protein TERM 392 465775 - 465761 - g 71 -12.8 -3.0263 | ACGACTTGGTGAAGA GCGCCG ACA CGGCGC TCTACCGCTCGAAAC Smed_0430 465277 - 466626 + | diguanylate cyclase/phosphodiesterase Smed_0431 467582 - 466599 - | LysR family transcriptional regulator Smed_0432 467665 - 469209 + | trimethylamine methyltransferase TERM 393 469267 - 469291 + T 76 -12.8 -3.04322 | opp_overlap 469268, overlap 469270 TGAAGGCTCAAAAAA AGAGCGGCGC AATAA GCGCCGCTCC TGTTGACCCGTTACA TERM 394 469290 - 469268 - T 100 -16.3 -5.43866 | opp_overlap 469267 469270 GAAGGCTCAAAAAAA GAGCGGCGC AATAA GCGCCGCTC CTGTTGACCCGTTAC TERM 395 469270 - 469288 + T 73 -13.1 -2.74371 | opp_overlap 469268, overlap 469267 AGGCTCAAAAAAAGA GCGGCGC AATAA GCGCCGC TCCTGTTGACCCGTT Smed_0433 469957 - 469319 - | PRC-barrel domain-containing protein TERM 396 470247 - 470208 - R 74 -11.4 -3.53012 | overlap 470209 CGTGCCGCGCCGAAA GGGCTGTGCTGCCTGTCC AGAT GAACAGGCAGCACAGGGA CACCGCACTAGGGTT TERM 397 470246 - 470209 - R 83 -14.9 -2.71712 | overlap 470208 GTGCCGCGCCGAAAG GGCTGTGCTGCCTGTCC AGAT GAACAGGCAGCACAGGG ACACCGCACTAGGGT Smed_0434 472035 - 470311 - | dihydroxy-acid dehydratase Smed_0435 473076 - 472192 - | SMP-30/gluconolaconase/LRE domain-containing protein Smed_0436 473711 - 473073 - | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase TERM 398 473368 - 473322 - G 86 -6.3 -5.00616 | gap 1, opp_overlap 473328, overlap 473324 GCTCGCCGGAAAAAA CTTCAG-GCCGCTGGCTCCGGC CGCT GCCGCTGCCAGCGCCTCCGTTG GCGTGAAGACACCCG TERM 399 473328 - 473361 + g 71 -13.7 -2.53876 | opp_overlap 473324 473322 CGGAAAAAACTTCAG GCCGCTGGCTCCGGC CGCT GCCGCTGCCAGCGCC TCCGTTGGCGTGAAG TERM 400 473507 - 473536 + g 86 -7.7 -4.74132 | gap 1, opp_overlap 473501, overlap 473508 TCGTCAGAACGGTGC CGGCCCCGATCAGG CAG CC-GGCCGGGGCCA TTTTTACTGCCGTCT TERM 401 473508 - 473535 + g 71 -11.2 -3.43756 | gap 1, opp_overlap 473501, overlap 473507 CGTCAGAACGGTGCC GGCCCCGATCAGG CAG CC-GGCCGGGGCC ATTTTTACTGCCGTC Smed_0437 474646 - 473726 - | 2-keto-3-deoxy-galactonokinase Smed_0438 475413 - 474643 - | short-chain dehydrogenase/reductase SDR TERM 402 475176 - 475144 - G 77 -14.7 -2.95894 | overlap 475136 475134 GAGAATATCGACAGA GCCGAGTCCGGCGAG AGC CTCGTCGGCCGCGGC GCGTACCGCATCGAC Smed_0439 475534 - 476394 + | transcriptional regulator IclR Smed_0440 476654 - 477394 + | regulatory protein LuxR TERM 403 478039 - 478023 - g 83 -12.3 -4.07885 | opp_overlap 478021 CATGCTGCGCGAAAA TGGCCTG CTC CAGGCCA ACTACTTCCCGGTCC Smed_0441 477535 - 478395 + | regulatory protein LuxR TERM 404 478681 - 478623 - f 71 -10.5 -3.56366 | gap 4, opp_overlap 478624 478667, overlap 478624 AAGAAGGTCGCGAAA GGGCCGCC-GCCGTTTGCCTGTGATCC CGGATGTAC GGA-CAC-GGCGAACGGCTGGCGGC-C TTCATTTTATCATCT TERM 405 478681 - 478624 - f 87 -16.5 -2.73338 | gap 3, opp_overlap 478624 478667, overlap 478623 AGAAGGTCGCGAAAG GGCCGCC-GCCGTTTGCCTGTGATCC CGGATGTAC GGA-CAC-GGCGAACGGCTGGCGGCC TTCATTTTATCATCT TERM 406 478624 - 478681 + F 100 -18.7 -3.77905 | gap 3, opp_overlap 478623 478624, overlap 478667 AGAAGGTCGCGAAAG GGCCGCC-GCCGTTTGCCTGTGATCC CGGATGTAC GGA-CAC-GGCGAACGGCTGGCGGCC TTCATTTTATCATCT TERM 407 478853 - 478835 - g 70 -10.2 -3.61894 | AATGGTTTTGAACAA GCTGCGGA ATG TCCGCGGC CCGGACATGGAAGGC TERM 408 479279 - 479259 - g 73 -11.1 -3.56594 | opp_overlap 479258, overlap 479250 GCAAACGGGCTGAAA GTCGGCCTC CTC GATGCCGAC ATCTATGGGCCATCC Smed_0442 478800 - 479954 + | hypothetical protein TERM 409 480807 - 480843 + G 72 -11.6 -3.32498 | opp_overlap 480806, overlap 480791 480809 GCTTGTTGCCAAGAC GCGCGACAGCCTCG CTTCGCTTT CGAGGCTGTTGAGC TTCGTCTATACGGTC TERM 410 481054 - 481072 + G 75 -12.4 -3.55563 | overlap 481052 GTCGTTCTGCTGCCG CCGACGCT GGT GGCGTCGG TTTACGGGATGAACT Smed_0443 480223 - 481200 + | magnesium and cobalt transport protein CorA Smed_0444 481216 - 483108 + | K potassium transporter TERM 411 483132 - 483122 - f 71 -6.8 -4.10161 | opp_overlap 483127 GACGATCCTCGAAAA GTGG CCC CCAC CGGCGTTTCGGCTTG Smed_0445 483327 - 484502 + | cell wall hydrolase SleB Smed_0446 484789 - 485148 + | putative FOF1 ATP synthase, subunit I transmembrane protein Smed_0447 485209 - 485961 + | F0F1 ATP synthase subunit A Smed_0448 486043 - 486270 + | F0F1 ATP synthase subunit C TERM 412 486281 - 486319 + F 72 -9.5 -3.67775 | gap 1, opp_overlap 486282 486283, overlap 486258 486283 TCTGATATCGGCAGA AGTTC-TGGCCGCGGCCC CCGG GGGTCGCGGCCACGCATA TTCTTGAGTGCACCT TERM 413 486283 - 486317 + F 87 -14.3 -3.41988 | gap 1, opp_overlap 486283 486282, overlap 486281 TGATATCGGCAGAAG TTC-TGGCCGCGGCCC CCGG GGGTCGCGGCCACGCA TATTCTTGAGTGCAC Smed_0449 486345 - 486959 + | F0F1 ATP synthase subunit B' Smed_0450 486973 - 487458 + | F0F1 ATP synthase subunit B TERM 414 487484 - 487512 + T 100 -18.1 -4.72986 | opp_overlap 487479 487478 CCGTGGAAATTGGAA GCCCCGCTTGGCG ACT CGCTTAGCGGGGC TTTTTCGTCGGAATC rnhB 488366 - 487716 - | ribonuclease HII TERM 415 488475 - 488441 - R 75 -8.6 -4.07568 | gap 1 GGTTGCCGGGGAAAA CCAGCAC-CGTCCGT GAGGCA AAGGACGGGTGCCGG AACTGTTAAAGGCAT Smed_0452 489663 - 488506 - | radical SAM domain-containing protein TERM 416 490094 - 490108 + G 73 -8.5 -4.08216 | overlap 490085 CACATCGTCGCGGAT GCGGC TGGTT GCCGC TTTTGCCCCGACTGG TERM 417 490475 - 490455 - g 77 -12.6 -3.59979 | GGGTCGCATTGGAAA GCCGTTCG GCCTG CGAACGGC ACCGGGCATCCGGTT Smed_0453 489944 - 490492 + | hypothetical protein Smed_0454 491619 - 490540 - | hypothetical protein TERM 418 491819 - 491795 - R 77 -10.8 -3.81146 | gap 1 TTTCCTAAGCAAGAA TGGGGCGTACC TTTC GGTAC-CCCCA AAGTGGCTCTCAAAT Smed_0455 492611 - 492069 - | molybdenum cofactor biosynthesis protein B Smed_0456 493531 - 492620 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 419 493553 - 493566 + r 87 -3.7 -5.40474 | TCAGGACTTCTTGTC CGGCG CCGG CTCCG TTTTTTTCGGAAGCT Smed_0457 495361 - 493538 - | TPR repeat-containing protein TERM 420 494800 - 494834 + g 81 -6.4 -4.8048 | opp_overlap 494809 CTCCGGCATGATAGT TCTTGAAGATCCGGAA CCA TTCCGGACCCTGGAGA TTTTTGATCTGCGCC Smed_0458 496575 - 495559 - | polyprenyl synthetase TERM 421 496515 - 496540 + g 91 -4.7 -5.29716 | gap 1, opp_overlap 496519, overlap 496520 ACTGCGTCAGGTCGA CAAGC-GGCTTC ACA GATGCCTGTTTG TTTTTATTGTCTTCC Smed_0459 496684 - 496905 + | hypothetical protein Smed_0460 496940 - 497710 + | methyltransferase small TERM 422 498145 - 498174 + G 70 -10 -3.54459 | opp_overlap 498136 498133, overlap 498144 498137 AGATCATCGCCGATC CGACCTCGATCG TCGGTT CGATCGGCGTCG TTTCGGGCGGCTTCG TERM 423 498528 - 498494 - g 72 -7.6 -4.11216 | opp_overlap 498494, overlap 498495 GCGCTATGGGGAAAA GGCGCGGCTCGAGCTG ATC CAGCCGGCGCGGAGCC TTTTCGGGCGGCGCC TERM 424 498549 - 498580 + G 72 -13.6 -2.79796 | GGGCGGCGCCAGCCT GGAGCGGCCGTGGC CGGA GCCATTGCCGCACC TCTCGTCGCCTCGGC Smed_0461 497790 - 498656 + | peptidase S49 Smed_0462 498803 - 498994 + | hypothetical protein glyQ 499081 - 500043 + | glycyl-tRNA synthetase subunit alpha TERM 425 500055 - 500035 - f 71 -11.1 -3.28269 | overlap 500030 500052 AACTGGGAAAGGGAA GCGGCCTGA TCA CCAGACCGC GCCTGCGGGCAGGAA TERM 426 500700 - 500690 - g 78 -5.4 -4.72272 | overlap 500691 GCCGCCCATGAAAAA TCGA CGA TCGA AGAGGTCGTCGCCCT Smed_0464 500507 - 501055 + | LemA family protein Smed_0465 501166 - 503100 + | putative transmembrane signal peptide protein TERM 427 503361 - 503328 - g 79 -9.5 -4.15044 | gap 1, opp_overlap 503328 TGCGCTCCGAAGAAA TCCCCGCCCGC-ATGC AGC GCAAAGCGGCCGGAGA TTTGAAGAAGCTCGT TERM 428 505412 - 505434 + G 74 -9.1 -3.87373 | CTGGGGCTCATCCGC TCGGCGACC GGGGA GGTCGCGGA TTTCTCGAAGATCTC glyS 503291 - 505456 + | glycyl-tRNA synthetase subunit beta Smed_0467 505520 - 506005 + | hypothetical protein Smed_0468 506137 - 506394 + | plasmid stability protein StbC Smed_0469 506391 - 506816 + | PilT domain-containing protein TERM 429 506900 - 506868 - T 90 -15.7 -3.53224 | opp_overlap 506862 506870 GAGTGTCGCTCTAAA GATTACGCCCCTG CTTCTCT CAGGGGCGCAATC TCTCGCTATTGCAGC Smed_0470 507483 - 506977 - | hypothetical protein TERM 430 507165 - 507116 - G 72 -11.9 -3.36073 | opp_overlap 507116 507117, overlap 507114 507117 GAGATTTCCGAAATA GCCGGGGGGAAGGCCGTTGCCGA ACGA TCTGCTACGGCCTGCTCACCGGT CTTCATTGCCGCGGC TERM 431 507116 - 507166 + g 77 -13.9 -3.33696 | gap 1, opp_overlap 507116 507114 507117, overlap 507117 GAGATTTCCGAAATA G-CCGGGGGGAAGGCCGTTGCCGA ACGA TCTGCTACGGCCTGCTCACCGGTC TTCATTGCCGCGGCC TERM 432 507117 - 507164 + g 89 -17.6 -3.23853 | opp_overlap 507116 507114 507117, overlap 507116 AGATTTCCGAAATAG CCGGGGGGAAGGCCGTTGCCGA ACGA TCTGCTACGGCCTGCTCACCGG TCTTCATTGCCGCGG TERM 433 507164 - 507117 - G 77 -15.4 -2.61322 | opp_overlap 507117 507116, overlap 507116 507114 AGATTTCCGAAATAG CCGGGGGGAAGGCCGTTGCCGA ACGA TCTGCTACGGCCTGCTCACCGG TCTTCATTGCCGCGG Smed_0471 508871 - 507600 - | phosphoribosylamine--glycine ligase Smed_0472 511174 - 508946 - | diguanylate cyclase/phosphodiesterase TERM 434 510774 - 510747 - G 71 -5.6 -4.38712 | gap 1, overlap 510748 510751 TGCAGCTTCAGAAAA CGAT-CGGGTTGC ACC GCAACCTGCATCA AGAGAGCATTTTTCC TERM 435 511265 - 511248 - R 74 -6.9 -4.2803 | CACGTGAACTGAAAA GGCTGCC AGAA GGTAGCC CGCCAGAACGACTGG Smed_0473 512350 - 511313 - | extracellular solute-binding protein Smed_0474 513647 - 512451 - | major facilitator transporter TERM 436 513665 - 513683 + H 71 -10.2 -3.63336 | overlap 513667 513677 513680 AATGTTCCTTCGGGG CGGCTCGC CAG GGGAGCCG TTTCGGCTCATCTCT TERM 437 513667 - 513720 + H 75 -5.3 -4.63172 | gap 2, overlap 513665 513677 513680 TGTTCCTTCGGGGCG GCTCGCCAG-GG-GAGCCGTTTCGG CTCATC TCTAAACGGCTTGCCGCTGGCCTGC TTTTGTGATTTGGTC Smed_0475 513759 - 514574 + | AraC family transcriptional regulator TERM 438 515313 - 515330 + G 74 -12.7 -3.28712 | opp_overlap 515301, overlap 515306 AAATTCGGCGGCGAA CTCGGCG GTTT CGCCGAG TTCTACCCCACGGAC Smed_0476 514953 - 515759 + | MltA-interacting MipA family protein TERM 439 516021 - 516045 + G 76 -10.6 -3.94184 | overlap 516002 515989 CCGGAGCGGCCGCAT CGCTCGGCAG CTTCT CGGCCGGGCG TTTCCTCTTCCATAT ubiA 515828 - 516793 + | prenyltransferase TERM 440 516816 - 516798 - T 100 -14.6 -4.8048 | opp_overlap 516798 GCCTGATATGAAAAA TCCTCCGG AAT CCGGAGGA TTGTCGGTAGAGCCA TERM 441 516798 - 516816 + T 87 -14.6 -3.35679 | opp_overlap 516798 GCCTGATATGAAAAA TCCTCCGG AAT CCGGAGGA TTGTCGGTAGAGCCA TERM 442 516847 - 516862 + T 72 -6 -4.3739 | opp_overlap 516845 516846 AATCGATACGAAATC CCAGCG GAAA CGCCGG TTTTATGCCCAACTC TERM 443 517130 - 517111 - T 100 -16.4 -4.99435 | opp_overlap 517111 CGCAACAAGCAAAAA CCGGCCGC GGGC GCGGCCGG TTGATCAGTCGAGAG TERM 444 517111 - 517130 + T 89 -16.4 -3.18264 | opp_overlap 517111 CGCAACAAGCAAAAA CCGGCCGC GGGC GCGGCCGG TTGATCAGTCGAGAG Smed_0478 517724 - 517158 - | hypothetical protein TERM 445 517886 - 517876 - H 77 -8.2 -4.2679 | CAATGGTTAGCAAAA GCCG ACG CGGC AAGGTTTCTCTTTCG TERM 446 518413 - 518365 - g 73 -11 -3.61715 | gap 1, overlap 518350 CAGCTTCGCCAACAA GCTGACGGACGAACGCTACCGCG AATT CGCGATGGCGTTCAGCT-TCAGC GGCGGGACGGCGGTT Smed_0479 517934 - 520402 + | hypothetical protein Smed_0480 521873 - 520440 - | FAD linked oxidase domain-containing protein TERM 447 520830 - 520842 + g 74 -6.2 -4.46212 | overlap 520833 GTCGTGCTTGATGGA GCCG CCTTC CGGC TTTTGTGCTGGCGAC TERM 448 521496 - 521474 - G 79 -9 -4.13014 | opp_overlap 521474 GCGACAGGGGGAAAA GCCGGTCGAC GTC GTCGGCCGCC TTCTGGATGTCCTCC TERM 449 521474 - 521496 + g 71 -11.2 -3.40299 | opp_overlap 521474 GCGACAGGGGGAAAA GCCGGTCGAC GTC GTCGGCCGCC TTCTGGATGTCCTCC Smed_0481 522895 - 521921 - | Sua5/YciO/YrdC/YwlC family protein Smed_0482 523589 - 522993 - | hypothetical protein TERM 450 525148 - 525165 + G 70 -9.9 -3.62096 | TGGAACCATATCCTC GGTGATC ACGC GATCACC TTTCGCGTGCTGCCG Smed_0483 524224 - 525468 + | Rieske (2Fe-2S) domain-containing protein Smed_0484 525471 - 526565 + | ferredoxin Smed_0485 527787 - 526567 - | glycoside hydrolase family protein Smed_0486 527886 - 528299 + | BA14K family protein TERM 451 528385 - 528410 + F 100 -18.3 -3.73813 | AGTTCAGGTCGTTGA GCGCCTCGGCC GATC GGTCGAGGCGC TTCTATTCGTCGTTC Smed_0487 528649 - 530430 + | acyl-CoA dehydrogenase domain-containing protein Smed_0488 530441 - 531193 + | enoyl-CoA hydratase TERM 452 532714 - 532725 + G 72 -7.2 -4.18494 | TCGGTTCAATGGCAG CCGC CGTC GCGG TTTTCCGTGCCAATG Smed_0489 531702 - 533798 + | methyl-accepting chemotaxis sensory transducer TERM 453 533848 - 533880 + T 100 -13.4 -4.58395 | opp_overlap 533837, overlap 533850 533854 CAATCGGAGTCGCTC TGGAGAGGCCCGGC TCATC GCCGGGCCTTCTCA TTTTTCGAGCGTCGC TERM 454 533850 - 533879 + T 89 -15.8 -3.34716 | gap 1, overlap 533848 533854 ATCGGAGTCGCTCTG GAG-AGGCCCGGC TCATC GCCGGGCCTTCTC ATTTTTCGAGCGTCG TERM 455 533854 - 533874 + T 95 -15.4 -3.75505 | overlap 533850 533848 GAGTCGCTCTGGAGA GGCCCGGC TCATC GCCGGGCC TTCTCATTTTTCGAG Smed_0490 535140 - 533878 - | (Uracil-5)-methyltransferase TERM 456 534766 - 534756 - G 73 -8.2 -4.07568 | overlap 534757 GCCGGGCGGTGAAAA CCGC GCG GCGG CGATCGCCGGGCCCT Smed_0491 535892 - 535137 - | hemolysin A Smed_0492 537919 - 536006 - | 1-deoxy-D-xylulose-5-phosphate synthase Smed_0493 539056 - 538133 - | pirin domain-containing protein TERM 457 538407 - 538380 - G 79 -15.6 -2.91144 | overlap 538357 538377 TTATCGGCGAAATGA TCTCCGGCGATG ATCG CTTCGCCGGAGA GAATGTAGAGCGCCC Smed_0495 539696 - 539445 - | exodeoxyribonuclease VII small subunit Smed_0496 540629 - 539700 - | histone deacetylase superfamily protein Smed_0497 541661 - 540693 - | alcohol dehydrogenase TERM 458 540932 - 540903 - G 83 -9.2 -4.30161 | gap 1 CCAGAGAAAATCAAA GCGGACGTCCGGC CTGTC GCCGATCG-CCGC CGGCGGCACCGGAAT Smed_0498 541675 - 542076 + | thioesterase superfamily protein Smed_0499 543257 - 542064 - | acetyl-CoA acetyltransferase Smed_0500 544737 - 543241 - | AMP-dependent synthetase and ligase TERM 459 543501 - 543484 - G 81 -10.5 -4.22678 | CAGATCGAAGACAAA GACGGCG TTGA CGCCGCC GGCTCCAAGGATCAC TERM 460 544386 - 544428 + g 84 -14.1 -3.74693 | gap 1, opp_overlap 544386 544388, overlap 544389 CATCGATTCGCAAGA GATCGCCTTCGGCGCGGATG ACGA CCTCCG-GCCGCAGGCGCTC TTTCATCCGCTGGCG TERM 461 544428 - 544386 - G 75 -14.1 -3.04461 | gap 1, opp_overlap 544386 544389, overlap 544388 CATCGATTCGCAAGA GATCGCCTTCGGCGCGGATG ACGA CCTCCG-GCCGCAGGCGCTC TTTCATCCGCTGGCG TERM 462 544389 - 544425 + g 74 -14.4 -2.67171 | gap 1, opp_overlap 544388 544386, overlap 544386 CGATTCGCAAGAGAT CGCCTTCGGCGCGGATG ACGA CCTCCG-GCCGCAGGCG CTCTTTCATCCGCTG TERM 463 544687 - 544662 - G 100 -18.3 -4.19953 | CACCGAACGTGAAAA CCCGGCCCTCC ATGC GGAAGGCCGGG GCGTGCGGGCGTTCT Smed_0501 545305 - 544742 - | BioY protein Smed_0502 545942 - 545337 - | cobalt transport protein TERM 464 545772 - 545742 - G 74 -11.8 -3.46509 | overlap 545738 545736 GGTGAAGAAGACGAA GCCGACGCGCGA CAGCGCT TCGCGCAGCGGC AGCCCCAGAGTGAGA Smed_0503 546616 - 545936 - | ABC transporter related TERM 465 547079 - 547067 - g 71 -9.1 -3.71645 | overlap 547055 547054 AATGGGAGAGCGAAA CGCTC CGC GAGCG GTGGCGCAAATGGCG TERM 466 547623 - 547651 + G 81 -7.9 -4.46617 | CCCCTTTGATCCGCT GCTGCGCGACCGG AAC CGGGCCGAGCGGC TTTTCGATTTCTTTT TERM 467 547870 - 547880 + G 73 -8.2 -4.08767 | ATGGCCGAACTCGAT CGGG TTG CCCG TTTTGCCGGCGTCGA Smed_0504 546739 - 547938 + | hypothetical protein Smed_0505 548041 - 549456 + | peptidase U62 modulator of DNA gyrase Smed_0506 550711 - 549494 - | Serine-type D-Ala-D-Ala carboxypeptidase Smed_0507 550909 - 551967 + | polysaccharide deacetylase Smed_0508 552143 - 553456 + | hypothetical protein Smed_0509 554115 - 553495 - | pyridoxamine 5'-phosphate oxidase Smed_0510 554223 - 554711 + | hypothetical protein TERM 468 555403 - 555369 - g 75 -12 -3.63782 | overlap 555360 CAAGAGCAGCCGAAA GCCGATGCGATGGTGC GGC GTTCCATCGCGCCGGC GGCAGAGCTTGTCGC Smed_0511 554913 - 555971 + | heat shock protein DnaJ domain-containing protein Smed_0512 556171 - 556989 + | enoyl-(acyl carrier protein) reductase Smed_0513 557206 - 557790 + | phosphoglycerate mutase Smed_0514 558154 - 557852 - | hypothetical protein Smed_0515 558536 - 559633 + | chorismate synthase Smed_0516 559679 - 560779 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 469 560817 - 560799 - T 100 -11.6 -5.14563 | opp_overlap 560799 560813 CCCCTCATGAAAAAA GCCGCGTC AAA GGCGCGGC TTGGTCGCTTCTCCG TERM 470 560799 - 560817 + T 82 -13.8 -3.23711 | opp_overlap 560799, overlap 560813 CCCCTCATGAAAAAA GCCGCGTC AAA GGCGCGGC TTGGTCGCTTCTCCG Smed_0517 561375 - 560845 - | invasion associated locus B family protein TERM 471 561825 - 561852 + G 74 -2.6 -4.8622 | gap 1, overlap 561831 561833 AAAAACAAGGCCTAT GCAGTTCTGGCAG CGC TTGCCTGT-CTGC TTTTTGCTTCGAGCG Smed_0518 561807 - 562691 + | cytochrome c oxidase subunit II Smed_0519 562711 - 564399 + | cytochrome c oxidase subunit I type TERM 472 564442 - 564407 - f 100 -21.2 -3.6215 | opp_overlap 564416 564432 TCAAGTGACGGGAAA CGAGCAGAAGCCGCCG GTTA CGGCGGCTTCTCCCCG CCGGCAAGCCGGCGC TERM 473 564416 - 564433 + F 86 -14.1 -3.28712 | opp_overlap 564407, overlap 564432 GGGAAACGAGCAGAA GCCGCCG GTTA CGGCGGC TTCTCCCCGCCGGCA TERM 474 564432 - 564465 + F 85 -10.1 -4.2558 | opp_overlap 564407, overlap 564416 CCGCCGGTTACGGCG GCTTCTCCCCGCCGG CAAG CCGGCGCGAAGCGGC TTTTCCTGCCGCATC TERM 475 564874 - 564896 + G 71 -9 -3.80207 | GGCTCGCCGTGCACT GGCTCGCAGC CGG GCTGCTCGCC TTTACGATTTTCTTC TERM 476 565087 - 565098 + G 72 -7.2 -4.11216 | CGCCGGCGCATTTCT GGGC CCTG GCCC TTTTCAAGATGGGCG Smed_0520 564498 - 565448 + | protoheme IX farnesyltransferase Smed_0521 565448 - 565588 + | hypothetical protein Smed_0522 565600 - 566196 + | cytochrome C oxidase assembly protein Smed_0523 566258 - 567136 + | cytochrome c oxidase subunit III TERM 477 567159 - 567188 + F 100 -22.9 -4.87803 | overlap 567177 567178 567180 TCGGACTGATGATGG CGGGGCGGCTGCA GGGA TGCGGCCGCCCCG TTTTCTTTGGGGCTG TERM 478 567255 - 567267 + G 71 -9.1 -3.80625 | GATGACGCTGTTTGC GGCGA CTG TCGCC TTTCCATTATCGGCC Smed_0524 567175 - 567717 + | hypothetical protein Smed_0525 567734 - 568117 + | hypothetical protein TERM 479 568278 - 568242 - g 100 -21 -3.9392 | CTGCAGTGGAAAGAA GCGCTGATCGGCGC AATTGCCGA GCGCCGATCAGCGC CGGCCGTTCCACTCG Smed_0526 568110 - 568853 + | Surfeit locus 1 family protein TERM 480 569168 - 569129 - g 80 -14.4 -3.17194 | gap 1 AGGTCTTGAAGCCAA GGGTGCGATTTTCGTCGAG GAG CTCGACGAGATTC-CACCC GAGCATCGCAAGCAG ispH 568944 - 569954 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Smed_0528 570058 - 571038 + | homoserine kinase rnhA 571035 - 571496 + | ribonuclease H Smed_0530 572103 - 571618 - | redoxin domain-containing protein TERM 481 572035 - 572053 + g 76 -6.7 -4.44548 | gap 1 TTCGGTGGTTACTTC GACCG-GG CCCT CCGCGGTC TTTTCCTTGAATGTG Smed_0531 573003 - 572155 - | hypothetical protein TERM 482 572312 - 572301 - G 76 -5.8 -4.61231 | overlap 572302 GCACATCGTGAAAAA TCGG CTCG CCGA AGAAGACACCCTCGG Smed_0532 573231 - 573836 + | hypothetical protein Smed_0533 576848 - 573936 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 483 576241 - 576224 - G 73 -6.9 -4.26076 | overlap 576225 GGATTGTCAGGAAAA CCGCCAG CAGG CCGGCGA TCCCGAGCACGATAC Smed_0534 577459 - 576848 - | GCN5-related N-acetyltransferase TERM 484 577234 - 577213 - G 77 -2.1 -5.0916 | gap 1, opp_overlap 577226, overlap 577214 TGTGGAAGAGAAAAA GCGGCACGGC CTG GCCG-GAAGC AAATTCCTGCTCATT Smed_0535 579038 - 577734 - | processing peptidase Smed_0536 580450 - 579053 - | threonine synthase TERM 485 580492 - 580504 + H 76 -6.9 -4.43477 | CCGATGAGGCGCGCG GCGCT ACA GGCGC TTTTGCTTCAATCCC TERM 486 580925 - 580870 - g 84 -15.4 -3.39288 | gap 2, overlap 580868 CAGGCTGTAACAAGA CGCAGACGGGTGGCGCCATCGACGCC GGCGGA AGCG-CGGCGGCGCC-CACGCCTGCG GTGATACAGGCGGCC Smed_0537 580800 - 581339 + | hypothetical protein TERM 487 581485 - 581447 - T 100 -24.1 -3.05498 | gap 1, opp_overlap 581453, overlap 581453 CATCTCATATAGAGA GCAAAACGCCGGGGCAGT ATAT ACTGCCCCGGCGTTT-GC AATTCTCCGTCAGCG TERM 488 581480 - 581453 - T 100 -22.8 -4.41956 | opp_overlap 581453, overlap 581447 ATATAGAGAGCAAAA CGCCGGGGCAGT ATAT ACTGCCCCGGCG TTTGCAATTCTCCGT TERM 489 581453 - 581480 + T 100 -22.8 -3.69621 | opp_overlap 581453 581447 ATATAGAGAGCAAAA CGCCGGGGCAGT ATAT ACTGCCCCGGCG TTTGCAATTCTCCGT Smed_0538 582612 - 581506 - | extracellular ligand-binding receptor Smed_0539 583450 - 582755 - | HAD family hydrolase Smed_0540 584326 - 583643 - | regulatory protein ArsR TERM 490 584377 - 584398 + H 90 -7.1 -5.1101 | opp_overlap 584372, overlap 584378 584379 GCGGCACGAACGGCA GAGCGCCGC TGCG GCGGCGCAA TTTTTTCCATCCTCC TERM 491 584378 - 584397 + H 75 -10.6 -3.65883 | opp_overlap 584372, overlap 584377 584379 CGGCACGAACGGCAG AGCGCCGC TGCG GCGGCGCA ATTTTTTCCATCCTC TERM 492 584379 - 584396 + H 80 -14.1 -2.78807 | opp_overlap 584372, overlap 584378 584377 GGCACGAACGGCAGA GCGCCGC TGCG GCGGCGC AATTTTTTCCATCCT Smed_0541 584422 - 585618 + | DNA methylase N-4/N-6 domain-containing protein TERM 493 585697 - 585725 + T 100 -20.4 -4.0641 | opp_overlap 585685 585697 AAAGCGCGCTTTAAA CGCCCGGAATCC GAAGA GGATTCCGGGCG TTTGTATGAATGGCA TERM 494 585725 - 585697 - T 100 -20.4 -3.5394 | opp_overlap 585697, overlap 585685 AAAGCGCGCTTTAAA CGCCCGGAATCC GAAGA GGATTCCGGGCG TTTGTATGAATGGCA Smed_0542 586413 - 585754 - | HAD family hydrolase Smed_0543 587587 - 586475 - | A/G-specific adenine glycosylase TERM 495 587081 - 587097 + g 73 -10.8 -3.53811 | CCGCATTTCGGGCTT CGCCGC CGGCA GCGGCG TTTCGACGGCATGGA TERM 496 587950 - 587961 + G 76 -7.2 -4.2558 | CGGTGGCCTGCGAGG GCGC CCGG GCGC TTTTCCTGACGCATG Smed_0544 587706 - 588212 + | hypothetical protein TERM 497 588429 - 588418 - g 71 -5.8 -4.2828 | overlap 588421 CTGCAGCGATGAAAA GCAG GAGG CTGC CTCGACGGCCCCCAC Smed_0545 588323 - 589132 + | DSBA oxidoreductase TERM 498 589153 - 589179 + F 100 -15.9 -4.8048 | gap 1 CGCTTTTTAATCCGA CGGGCG-ACGGC GGTA GCCGTGCGCCCG TTTTTCGTATCGCGC Smed_0546 589212 - 589583 + | hypothetical protein TERM 499 590991 - 590979 - g 81 -7.7 -4.42238 | GGAGGCCAACGAAAA GCTTG CCG CAAGC GAAGGCGCACTTGCT Smed_0547 589852 - 593313 + | chromosome segregation protein SMC TERM 500 594884 - 594920 + G 74 -9.9 -3.70902 | opp_overlap 594871, overlap 594886 CATCGGCTCCGGCCT GCCGGCCTCGCCGGGCG CGG CGACGGGCGAGATCGTC TTTACCTCTGACGAG TERM 501 594886 - 594918 + G 71 -11.1 -3.43773 | opp_overlap 594871, overlap 594884 TCGGCTCCGGCCTGC CGGCCTCGCCGGGCG CGG CGACGGGCGAGATCG TCTTTACCTCTGACG Smed_0548 593658 - 596354 + | pyruvate phosphate dikinase Smed_0549 596671 - 596423 - | hypothetical protein Smed_0550 597233 - 596844 - | hypothetical protein TERM 502 597682 - 597710 + G 72 -12.3 -3.26298 | overlap 597681 597700 ACGCCACACTTTCTG GCGATGGCGCTGG CCG CCGGAGCCCTCGC TCTCTTTGCCGTCGT Smed_0551 597547 - 598455 + | hypothetical protein Smed_0552 599440 - 598532 - | beta-lactamase domain-containing protein TERM 503 600162 - 600152 - g 88 -8.2 -4.69053 | overlap 600153 CAGGACGCAACAAAA CCGG AAG CCGG CGCGCCAACCGAAGC TERM 504 600983 - 600998 + G 100 -4.6 -5.47399 | overlap 600984 CCTGTCGATCTGGCG ACGGTC CTCA GACCGG TTTTTTTCGGCTTGA TERM 505 600984 - 600997 + G 71 -8.1 -3.87355 | overlap 600983 CTGTCGATCTGGCGA CGGTC CTCA GACCG GTTTTTTTCGGCTTG TERM 506 602466 - 602442 - g 84 -4.1 -5.14563 | TTCGGGAGGAAAAAA TCGAGATGCCC TTC GGCCAGCGCGA CATCCATCTTCGCGA TERM 507 602608 - 602589 - g 75 -4.2 -4.68103 | gap 1, overlap 602591 CGAAGCGTAAGAAAA GCCCGGCGG ATG CCG-CAGAC GAATGACATTGCGGC Smed_0553 599990 - 602614 + | MscS mechanosensitive ion channel Smed_0554 603226 - 602813 - | hypothetical protein TERM 508 602969 - 602994 + g 88 -4.5 -5.27779 | overlap 602954 602953 602975 602983 GCGGGGGGCGGAGAT CCGCTTGCCGC GTTT GCCGTCGGCGG TTTTTTCGTATTCGG TERM 509 603129 - 603108 - G 79 -9.3 -4.21631 | opp_overlap 603117 603118, overlap 603109 AACTGAGCGAAGAAA GGGCCGGCC GGCT GGCCGAGCC AGCGTGCCTCGACCG TERM 510 603270 - 603283 + H 72 -5.2 -4.42238 | CTGCGGCACGGAAGG CCGG CATCCC CCGG TTTTCCTTGCAGTCC TERM 511 603356 - 603334 - H 79 -5.5 -4.87133 | gap 1 AGCCGCGAAAGAAAA TCGGCTCGTG ACAG CGCG-GCCGA GGAAATTGGACAGCG TERM 512 603432 - 603442 + H 77 -2.4 -5.15969 | CCGAATTTTTTGAGC GTCC AAG GGTC TTTTTTGAGTTAGGC Smed_0555 603813 - 603956 + | hypothetical protein Smed_0556 604152 - 603964 - | XRE family transcriptional regulator TERM 513 604371 - 604356 - R 100 -11.8 -4.7254 | AGCGGGTAGCAAAAA GGGGCC TCGC GGCCCC TCTCACCATCGACGA Smed_0557 605892 - 604396 - | sulfate adenylyltransferase, large subunit Smed_0558 606845 - 605892 - | sulfate adenylyltransferase subunit 2 Smed_0559 607669 - 606893 - | adenylylsulfate reductase, thioredoxin dependent TERM 514 606988 - 607013 + g 76 -13.9 -3.14344 | TCTCCCACCACCAGC GTCCGGCGCGC TCCG GCTCGCCGGGC TTGATGGCACGGGTG Smed_0560 607947 - 608333 + | hypothetical protein TERM 515 608763 - 608777 + G 73 -11.4 -3.53811 | overlap 608775 608776 TTTCCATGTCGATCT GGACCG GCG CGGTCC TTTCCGGCCGCTGGA Smed_0561 608333 - 608812 + | hypothetical protein Smed_0562 610464 - 608815 - | choline dehydrogenase TERM 516 610211 - 610249 + g 78 -11.7 -3.68222 | gap 1, opp_overlap 610210 TTGATCGAAGAGGAG CCGCCG-ATCACCTTGCC GCGC GGCGCGGTGATGCGCCGG TTGTTGAGGTTCGGC Smed_0563 612125 - 610662 - | betaine aldehyde dehydrogenase Smed_0564 613665 - 612127 - | sulfatase TERM 517 612745 - 612733 - G 78 -6.3 -4.57569 | TGAGCCTTCGAAAAA GTTCA TCT TGAAC CAGAGGCCGCGCTCG TERM 518 613760 - 613722 - R 100 -28.4 -3.59979 | overlap 613754 TGTTTCGAGTGGAAA CTACCCCTCTCCTCGAGT TAA ACCCGAGGAGAGGGGTAG TCCCCACCACCCGCC Smed_0565 614347 - 613739 - | transcriptional regulator BetI TERM 519 613899 - 613926 + g 82 -14.9 -3.30441 | GTGCCCTCGGCAATG CGCTCTGCGTC ATCTGC GGCGCAGAGCG TTCTCAGGCCTGCTA Smed_0566 614491 - 615039 + | hypothetical protein Smed_0567 615148 - 616947 + | diguanylate cyclase/phosphodiesterase Smed_0568 617028 - 618029 + | quinone oxidoreductase putative PIG3 TERM 520 618269 - 618250 - T 88 -16.4 -3.08966 | opp_overlap 618250, overlap 618240 618262 CCAAAGCTCATGGAA GGGCCGCC GAAA GGCGGCCC TTTTCCAGTTCCGCC TERM 521 618250 - 618269 + T 100 -16.4 -4.19238 | opp_overlap 618250 618240 618262 CCAAAGCTCATGGAA GGGCCGCC GAAA GGCGGCCC TTTTCCAGTTCCGCC Smed_0569 619057 - 618299 - | hypothetical protein Smed_0570 619108 - 620118 + | L-asparaginase II Smed_0571 620204 - 620824 + | glutathione S-transferase domain-containing protein Smed_0572 621208 - 622143 + | LysR family transcriptional regulator Smed_0573 622762 - 622103 - | glutathione S-transferase domain-containing protein Smed_0574 622989 - 625307 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Smed_0575 625670 - 626353 + | ErfK/YbiS/YcfS/YnhG family protein Smed_0576 626857 - 626381 - | transcriptional regulator, TrmB Smed_0577 626965 - 627387 + | OsmC family protein TERM 522 627408 - 627435 + T 83 -13.6 -3.4252 | gap 1, overlap 627412 GCGCTTGCGGAAGGC TGAAGCCCG-AGT GCG ACTGCGGGCTTCA TTCTACTAGATGCCC Smed_0578 629109 - 627547 - | protein of unknown function DUF853 NPT hydrolase putative TERM 523 629164 - 629150 - H 86 -8.5 -4.63218 | TTTTTCTTAATAAAA GCGGG CATTT CCCGC ATGTCGCATAAAATC Smed_0579 629400 - 629792 + | hypothetical protein Smed_0580 630711 - 629884 - | aldo/keto reductase Smed_0581 631588 - 630815 - | trans-aconitate 2-methyltransferase TERM 524 631156 - 631143 - G 76 -6.7 -4.41895 | opp_overlap 631142 AAGGCTGAAGCAAAA GCAGA CTCC TCTGC CGTTTCCTCCATCAG Smed_0582 632264 - 631602 - | haloacid dehalogenase, type II TERM 525 632179 - 632163 - G 72 -7.9 -4.10657 | CCAGAGTTCCGAAAA GGCCTGA CCG TCCGGCC CGATCGCTTCGGCAT TERM 526 632528 - 632510 - R 71 -7.4 -4.15565 | opp_overlap 632509 632512 TGCATCATGTCAAAA CTTTGTGC GCC GCACAATG CCTTCGTTTCCCGCC Smed_0583 633100 - 632549 - | hypothetical protein TERM 527 632644 - 632689 + g 72 -3.9 -4.57569 | gap 1, overlap 632630 632646 GGCCGAGCACGTGCC GGTTTGGCTTTGCTTC-CGGGC GCA GCGCGTGAAGCGAAGACGCAGC TTTTTCCGGCGCTAC Smed_0584 634235 - 633195 - | alcohol dehydrogenase Smed_0585 634388 - 635269 + | aminotransferase Smed_0586 635699 - 635289 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 528 636209 - 636193 - g 72 -2.1 -4.74801 | overlap 636194 GAAGTGGATGAAAAA GGGTGGC GGC GGCACCA GTCTTCCCGGCAAGC Smed_0587 635936 - 636538 + | superoxide dismutase Smed_0588 637477 - 636764 - | helix-turn-helix type 11 domain-containing protein TERM 529 637387 - 637420 + g 78 -10.2 -4.07568 | gap 1 ATCGTGGCGTGACCT CCAGCG-CGTCGGCG ATCTC CGCCGCCGTCACTGG TTTTCGGGCGAGCCG Smed_0589 637606 - 638244 + | lysine exporter protein LysE/YggA TERM 530 638757 - 638731 - g 73 -13 -3.22102 | overlap 638729 AGATCTGGGAGAATA TGGCGGACTTCA AGG CGAAGGCCGCCA AGCTCGGGGGGGACG Smed_0590 638442 - 638888 + | cytochrome c class II TERM 531 639270 - 639257 - g 84 -3.8 -5.21709 | overlap 639259 CGGCAGACGAAAAAA GGCT CCTGCT AGCC GGAGGCCGCAGCCTG Smed_0591 639016 - 639960 + | gluconate 2-dehydrogenase (acceptor) TERM 532 639975 - 639988 + T 70 -3.8 -4.59773 | AACCGCAACGATCGC CTCG CTCACC CGAG TTTTTGCAGGTAACG Smed_0592 640483 - 639980 - | GCN5-related N-acetyltransferase TERM 533 640552 - 640536 - R 100 -10.8 -5.26119 | opp_overlap 640536 640535 640548 CCGTGAAAAACAAAA GCCGCC CTGAT GGCGGC CTTGTTGAATATGAT Smed_0593 641088 - 640675 - | MerR family transcriptional regulator TERM 534 640767 - 640786 + g 83 -12.2 -3.97368 | overlap 640778 GACAGGCGACGATGC GCTTGAGC TCAT GCTCAAGC TTTCTAAGTTGGGCG Smed_0594 641373 - 642263 + | Beta-lactamase TERM 535 642279 - 642305 + T 84 -15.9 -2.53015 | gap 1, opp_overlap 642283 CCATGCTCTCGCGAA CGGAGCGCGCTC TGGC GAGCGCGC-CCG TCGATTCGAACCTGT TERM 536 642302 - 642283 - T 81 -15 -2.52464 | opp_overlap 642279 GCTCTCGCGAACGGA GCGCGCTC TGGC GAGCGCGC CCGTCGATTCGAACC Smed_0595 644654 - 642324 - | quinoprotein glucose dehydrogenase Smed_0596 646487 - 644934 - | hypothetical protein TERM 537 645080 - 645061 - G 78 -4.8 -4.74706 | opp_overlap 645061 645061, overlap 645062 TCGAAGAGGGAAAAA TCCGCGTC TTCG GTCGCGGC ATTGATCGCCTGTTC TERM 538 646275 - 646239 - G 82 -10.8 -4.09243 | gap 1, opp_overlap 646264, overlap 646242 CAGATTGCCCGAAAA GATCG-CCGCGCCATCG CACT CGATGGCCCGGACGTCC AGTCCGAGCTCTTCC Smed_0597 647534 - 646566 - | homocysteine S-methyltransferase TERM 539 647501 - 647478 - G 78 -6.7 -4.56597 | gap 1, opp_overlap 647497, overlap 647480 GCCGTCGCTCAAAAA CATGCCGCCC CGCAC GAGCGGCA-G ATCATGCCTGTATCT TERM 540 647500 - 647480 - G 76 -10.4 -3.90048 | opp_overlap 647497, overlap 647478 CGTCGCTCAAAAACA TGCCGCCC CGCAC GAGCGGCA GATCATGCCTGTATC Smed_0598 648211 - 647681 - | hypothetical protein Smed_0599 650332 - 648224 - | oligopeptidase B Smed_0600 651436 - 650504 - | LysR family transcriptional regulator TERM 541 650842 - 650827 - G 86 -11.8 -4.13945 | overlap 650813 AGGCCCAGCGGAAAA GCCGGC CGTG GCCGGC GAAGCGATAGATCAG TERM 542 651433 - 651460 + g 76 -7 -4.51197 | opp_overlap 651432 651431, overlap 651436 TATCCATTAGCAATT CCATCGAATGGC GAGC GACATTCGATAG TTTTGCTTAGTTCTG TERM 543 651625 - 651646 + G 73 -3.5 -4.8048 | overlap 651601 CAAGTTGCCGCCCAC CGCGGTGCC ATAC GTCTTCGCG TTTTTCATGTCGGCG Smed_0601 651566 - 651841 + | hypothetical protein Smed_0602 652770 - 651880 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 544 652754 - 652736 - G 73 -8.8 -4.08216 | TGATCGGCGGGAAAA CTCACCGG CTT CAGGTGAG ACGTGTCCATCATCA Smed_0603 653060 - 653554 + | UspA domain-containing protein Smed_0604 653610 - 653954 + | TraR/DksA family transcriptional regulator Smed_0605 654254 - 654916 + | Hly-III family protein Smed_0606 655490 - 654993 - | hypothetical protein TERM 545 656282 - 656306 + G 77 -12.7 -3.5393 | TCGGCTTCGATCACC GGCGCGAGGCG GCG CGCCGCGCGGC TTTGCAGGCCCTGGT TERM 546 656618 - 656653 + G 76 -8.2 -4.2349 | overlap 656619 GGCTCAACCCGGTGC TCGGCGGCACGACC GAGTGGCA GGTCCTGCTGCCGC TTTTCGGTGTGACGA TERM 547 656619 - 656652 + G 70 -11.7 -3.13773 | overlap 656618 GCTCAACCCGGTGCT CGGCGGCACGACC GAGTGGCA GGTCCTGCTGCCG CTTTTCGGTGTGACG TERM 548 656968 - 656979 + G 86 -7.2 -4.68506 | overlap 656947 656966 GCCTTGTCGATGGGG GGGC TGCC GCCC TTTTTCGGGTTCCTT TERM 549 657344 - 657364 + G 76 -11.1 -3.71998 | TGTTGCTTTCCGTCG CGACGCTGG CGG TCGGCGTCG TTCTGTTCCTCAATC Smed_0607 655816 - 658191 + | putative monovalent cation/H+ antiporter subunit A TERM 550 658296 - 658277 - g 72 -12.2 -3.28712 | opp_overlap 658270 658281, overlap 658281 GCTGCGCGGCCACAA TGAACCCG GGGG CGGGTTCA TTGGCGGATTGATCG Smed_0608 658188 - 658607 + | putative monovalent cation/H+ antiporter subunit B Smed_0609 658607 - 658984 + | putative monovalent cation/H+ antiporter subunit C TERM 551 659557 - 659569 + G 79 -9.1 -4.11183 | overlap 659555 CGGATTTCTGAATCT GGTCG CGA CGACC TTGTTTCTCGTCGCC Smed_0610 658991 - 660553 + | putative monovalent cation/H+ antiporter subunit D Smed_0611 660550 - 661026 + | putative monovalent cation/H+ antiporter subunit E Smed_0612 661023 - 661409 + | putative monovalent cation/H+ antiporter subunit F Smed_0613 661409 - 661759 + | putative monovalent cation/H+ antiporter subunit G TERM 552 662115 - 662133 + F 83 -11.8 -3.80516 | TTTGTACATCCTCCC CCTGAAAC GGT GTTTCAGG TTTCGTCGCTTGATT Smed_0614 662165 - 662596 + | MucR family transcriptional regulator TERM 553 662657 - 662638 - T 71 -10.6 -3.53343 | opp_overlap 662638 662652 AACTGTTGCTGCAAA GGCTGGCC GGAA GGCCGGCC TTTTTCATGAGGACG TERM 554 662638 - 662657 + T 100 -12.8 -4.72272 | opp_overlap 662638, overlap 662652 AACTGTTGCTGCAAA GGCTGGCC GGAA GGCCGGCC TTTTTCATGAGGACG Smed_0615 663116 - 662694 - | Fe-S metabolism associated SufE Smed_0616 663678 - 663259 - | hypothetical protein Smed_0617 664192 - 665769 + | histidine kinase TERM 555 665877 - 665894 + GF 72 -4 -4.652 | overlap 665878 665887 CCCGTCATCCGTTGA GCGCCG GCGGGA CGGCGA TTTTTGCGGTCGTTT Smed_0618 665741 - 666679 + | peptidoglycan binding domain-containing protein Smed_0619 666750 - 667097 + | hypothetical protein TERM 556 667205 - 667225 + T 73 -3.2 -4.81306 | opp_overlap 667195 GATAAGACGCACGGC GCTGTAGA GGTCA TCTGCTGC TTCTTTTTTGTTGCC Smed_0620 668309 - 667251 - | hypothetical protein TERM 557 668050 - 668036 - G 74 -10 -3.75153 | CGGCGGCAATTGAAA TCGGCA TGC TGCCGA TCAGCAGGACCACGG Smed_0621 668556 - 669218 + | SH3 type 3 domain-containing protein TERM 558 669239 - 669264 + F 79 -13.9 -3.14881 | overlap 669255 GGGCGAACCGCTCCT GGGCCGGCGGC CTGT GCCGTCGGCCG TTCCTGCCGCGATTG Smed_0622 669352 - 669654 + | hypothetical protein Smed_0623 669828 - 670112 + | hypothetical protein Smed_0624 670744 - 670199 - | hypothetical protein Smed_0625 671324 - 670737 - | hypothetical protein TERM 559 671287 - 671234 - G 71 -10.9 -3.53031 | gap 1, overlap 671223 671235 TCGAGCCGAAACCAA CCGTCGCCTTCAGCGCCCATA-CGGC CGA GCCGATTCCGCCGCCGAACGCGACGA TGAGGGCAAGAGCGA Smed_0626 673622 - 671421 - | 1A family penicillin-binding protein TERM 560 671519 - 671548 + g 72 -4.1 -4.63218 | overlap 671508 671520 GTTCGCGTGCCTTCA ACGGCTGCGCCTT TTCG AAAGTGCCGCCGA TTTTCTTCAGAAGCC TERM 561 671609 - 671622 + g 76 -5.9 -4.64657 | overlap 671602 GCACGAGCGGCGGCA GGGCG TTGT CGTCC TTTTTGGCGGTTTCG Smed_0627 673774 - 674241 + | hypothetical protein Smed_0628 674609 - 674274 - | hypothetical protein TERM 562 674685 - 674647 - H 75 -5.8 -4.59773 | opp_overlap 674675 GCCGATTGGCAAAAA CCCGCATAGTCACGCCGC AGC GCAATGTCACTCGGCGGG AGGAACCGTCTTCTG Smed_0629 675193 - 675444 + | putative signal peptide protein Smed_0630 675487 - 676158 + | two component transcriptional regulator Smed_0631 676148 - 677533 + | integral membrane sensor signal transduction histidine kinase TERM 563 677654 - 677641 - f 91 -8.1 -5.0538 | opp_overlap 677650 CCGGACGGGAAAAAA TGCGG GTGC CCGCA TGGGGCGGTTGCCTC Smed_0632 677790 - 678236 + | putative outer-membranne lipoprotein TERM 564 678623 - 678637 + G 76 -11.4 -3.74461 | CGACTTCTTTCCAAT CGCCTG TCG CAGGCG TTCATTTTCCTCTGT TERM 565 679084 - 679066 - g 72 -4.5 -4.63527 | GCAGGAGGGTAAAAA TGCGGAG GCACT CTCGGCA TTCCGCAAGCTGGCA Smed_0633 678344 - 679513 + | cytochrome C-type biogenesis transmembrane protein TERM 566 679817 - 679846 + G 76 -6.3 -4.4078 | gap 1, overlap 679806 GGCAGGGCGTCGTGG CCGAGGGTGCCTTC GTC GGCGGCAGCC-CGG TTTTCGTTGCGGACA Smed_0634 679510 - 679962 + | cytochrome c-type biogenesis protein CcmE TERM 567 680769 - 680759 - g 76 -8.2 -4.18018 | overlap 680760 GCTGGTCATGGAAAA GCGC GAA GCGC TGAAGATCTGGACCG TERM 568 681083 - 681122 + G 86 -8.5 -4.59773 | gap 1 CTATCCGCTGGTGCT CGAAGCGCTGACCGGCGA CAAGA TC-TCGGTCGGCGCGCCG TTTTTCAACATGACC Smed_0635 679959 - 681941 + | cytochrome c-type biogenesis protein CcmF Smed_0636 681938 - 682393 + | cytochrome C biogenesis protein Smed_0637 682614 - 684167 + | protease Do TERM 569 684199 - 684234 + F 100 -19.1 -4.59342 | AATTGCCGTCCATGA GGGGCGCCGCGACAT CAAACC ATGTCGTGGCGCTCC TTTGTTTCTGGTCGG Smed_0638 684311 - 685012 + | two component transcriptional regulator Smed_0639 685009 - 686406 + | integral membrane sensor signal transduction histidine kinase TERM 570 686756 - 686766 + G 74 -4.6 -4.56597 | CGCTGCTATCCGAAA CGCT GCC GGCG TTTTTGAAGCGCAGG TERM 571 686897 - 686951 + G 73 -8.5 -4.07568 | gap 1, opp_overlap 686936, overlap 686890 CCTTCGCCGTCGCTC TCGCGGACCTTTCGCGTCTTTTCAGC GCCC GC-GAGACGACGCGGTGGCTCAGCGA TTTTGCAGAGGCGGC TERM 572 688192 - 688204 + G 71 -4.7 -4.43844 | CTCTCGGGGCTGCCG GCGGG GAT CCAGC TTTTCTCCCTGCTCG TERM 573 688872 - 688846 - g 72 -7.8 -4.15044 | opp_overlap 688847, overlap 688847 CCCTCCGGCAACAAA GGGCCCGTTGCG ACA CGCATCGCGGCC TTTGCCAAATACCAG TERM 574 688847 - 688872 + G 73 -11.1 -3.55444 | gap 1, opp_overlap 688846 688847 CCTCCGGCAACAAAG GGCC-CGTTGCG ACA CGCATCGCGGCC TTTGCCAAATACCAG Smed_0640 686506 - 689463 + | (glutamate--ammonia-ligase) adenylyltransferase Smed_0641 691791 - 689473 - | multi-sensor signal transduction histidine kinase Smed_0642 694742 - 692088 - | aminopeptidase N TERM 575 692510 - 692496 - G 70 -10 -3.58343 | CGCATTATTGGCAAA GCGTTC CTT GAACGC GGCCAAGGCCTCCGC TERM 576 692667 - 692689 + g 75 -11.9 -3.57144 | opp_overlap 692659 692655 692657 692667 GAAGAGACCGGAATA GCGCAGGGC TCGAC GCCCGGCGC TTTCGGCGTCCGGAC TERM 577 695692 - 695706 + G 85 -5.6 -5.00616 | overlap 695677 CGGCGGAGGCTATGG GTGCCG TCG CGGTGC TTTTTTCGGCGGCGC Smed_0643 695208 - 696146 + | hypothetical protein Smed_0644 697456 - 696167 - | major facilitator transporter TERM 578 696859 - 696837 - G 76 -7.6 -4.36914 | overlap 696838 GCGCCGGCGAGAAAA CCGCCGACGA CGG CCACCGGCGA GCGTCGATAGAGCGC TERM 579 696896 - 696912 + g 76 -13.7 -3.14132 | GTCGAAGTCCGCCCG TGCCGGC GGT GCCGGCA TTGGTGAGGACGAGA Smed_0645 697878 - 697723 - | hypothetical protein Smed_0646 698083 - 697916 - | hypothetical protein TERM 580 698165 - 698185 + r 90 -6.8 -5.055 | opp_overlap 698169, overlap 698167 TTAAAACGCCGCTCA GACATGCG CAAAT CGCATGGC TTTTTTCACGCTTCG Smed_0647 699071 - 698202 - | phage SPO1 DNA polymerase-related protein Smed_0648 700449 - 699160 - | putative heat shock protein TERM 581 699595 - 699610 + g 72 -2.5 -4.74103 | CTTTTCCGGCTCCAG GCTTG CCCTAA CGAGC TTTTTCAATTCGGCG TERM 582 700876 - 700857 - g 78 -10.6 -4.07568 | opp_overlap 700856 CGTGGTGCTGGAAAA GGGCGCCG AAGT CGGCGCGC ATATCCTCTCGGGCG Smed_0649 700717 - 702381 + | electron-transferring-flavoprotein dehydrogenase TERM 583 702428 - 702455 + F 100 -8.4 -5.0538 | opp_overlap 702432, overlap 702430 GCGTTTGGACATGCG AAGAGCCCGGAA GCGA TTCCGAGCTCTC TTTTTTGCCGTCCAG TERM 584 702430 - 702453 + F 88 -11 -4.15748 | opp_overlap 702432, overlap 702428 GTTTGGACATGCGAA GAGCCCGGAA GCGA TTCCGAGCTC TCTTTTTTGCCGTCC TERM 585 702532 - 702516 - f 70 -2.1 -4.76892 | opp_overlap 702518, overlap 702518 AGATGAATTTAAAAA GGGGGGT TAA ACCCATC AATTATTTGTGTAGT TERM 586 702672 - 702692 + F 74 -8.1 -4.22678 | overlap 702666 GCGAGCTATCGCCCC CCGGCAACG GAC CGGGGCCGG TTTCTGTTCCCTGTC Smed_0650 702769 - 703767 + | substrate-binding region of ABC-type glycine betaine transport system TERM 587 703782 - 703811 + F 100 -15 -5.00616 | opp_overlap 703786, overlap 703783 GTCGACTCCTTTCCG AGAACGGCGCGC GTAAAA GCGCGCCGTTCC TTTTTTAGAAGACGC TERM 588 703783 - 703810 + F 100 -18.5 -3.60048 | opp_overlap 703786, overlap 703782 TCGACTCCTTTCCGA GAACGGCGCGC GTAAAA GCGCGCCGTTC CTTTTTTAGAAGACG TERM 589 703807 - 703786 - f 86 -14.4 -3.28791 | opp_overlap 703783 703782 ACTCCTTTCCGAGAA CGGCGCGC GTAAAA GCGCGCCG TTCCTTTTTTAGAAG Smed_0651 703967 - 704854 + | binding-protein-dependent transport systems inner membrane component TERM 590 704878 - 704902 + T 88 -15.8 -3.03124 | GCTGCTTTTGAGTTG CCACTCCCCA CAAGC TGGGGAGTGG TCTTACGGAATCGGG Smed_0652 705961 - 704948 - | zinc-binding alcohol dehydrogenase Smed_0653 706062 - 706463 + | HxlR family transcriptional regulator Smed_0654 706579 - 707505 + | diacylglycerol kinase catalytic region Smed_0655 709002 - 707521 - | glycosyl transferase family protein TERM 591 708498 - 708482 - G 76 -10.9 -3.73775 | GCGACCGGCACCAAA GCGAAGT TAT ACTTCGC CATTAGGCCGATGCC Smed_0656 709984 - 708995 - | glycosyl transferase family protein TERM 592 710900 - 710925 + G 79 -11.1 -3.90112 | gap 1, opp_overlap 710900, overlap 710900 GGGCGTAGGAACCTA C-GCGGCGGCGA TCG TCGCCGGCGCCG TTTCCTTCGGAGCGG Smed_0657 710109 - 711059 + | hypothetical protein Smed_0658 712667 - 711165 - | AMP nucleosidase Smed_0659 713115 - 712795 - | hypothetical protein Smed_0660 713363 - 713190 - | hypothetical protein Smed_0661 713550 - 713377 - | hypothetical protein Smed_0662 713791 - 714492 + | glutathione S-transferase domain-containing protein TERM 593 714550 - 714572 + T 83 -15 -2.74563 | CAGTCACTTTCACGA TTTCAGGTCG ATG CGACCTGAAA TCATTGCGGTCTAAA Smed_0663 714924 - 714583 - | hypothetical protein TERM 594 714824 - 714791 - G 71 -8.8 -3.92641 | opp_overlap 714793 714795 714816 AAGGTGACGCAGAAA GCTCCGCCGCAG GGCGCGATTT CCGCGGTGGAGC CGCTCGCCGTCTTCC Smed_0664 715521 - 715787 + | Sel1 domain-containing protein Smed_0665 716990 - 715869 - | histidinol-phosphate aminotransferase TERM 595 717174 - 717147 - H 71 -12 -3.01712 | overlap 717173 GGCTGGCGCTCAATA CGGTTCTCGCCG CTGC CGGTAAGAACCG CTCGATAACGAAAAT TERM 596 717588 - 717561 - g 83 -9.2 -4.32177 | gap 1, overlap 717564 717584 CCACCCCAGAACAAA TCACGGCTCCTCC CGG GGAGGAAC-GCGA CTGCCGACTGGAAAT Smed_0666 717375 - 717677 + | hypothetical protein TERM 597 718363 - 718373 + G 73 -8.2 -4.08394 | overlap 718366 ATGCACCAGCTCGCG CGGC ACT GCCG TTTTACAGGCGGTGT TERM 598 718366 - 718387 + G 72 -7.3 -4.18018 | gap 1, overlap 718363 CACCAGCTCGCGCGG CACTGCC-GT TTT ACAGGCGGTG TTTTACCTGGCGGCG Smed_0667 717880 - 718548 + | hypothetical protein TERM 599 718729 - 718746 + F 74 -6.9 -4.386 | overlap 718721 GTGCTTGCCTGGTTT TGACCCG GTTT CGGGCCA TTTTCTGCCCCGTTC Smed_0668 719074 - 720111 + | porin TERM 600 720137 - 720166 + T 100 -14.4 -5.09173 | gap 1, opp_overlap 720142, overlap 720138 CCTCGGTCAGTGGAA G-GAAAGCCCGGC TCAAT GCCGGGCTTTCTC TTTTTTAAGGTATTG TERM 601 720138 - 720164 + T 100 -18.1 -4.16351 | opp_overlap 720142, overlap 720137 CTCGGTCAGTGGAAG GAAAGCCCGGC TCAAT GCCGGGCTTTC TCTTTTTTAAGGTAT TERM 602 720160 - 720142 - T 87 -13.1 -3.91911 | opp_overlap 720138 720137 GTCAGTGGAAGGAAA GCCCGGC TCAAT GCCGGGC TTTCTCTTTTTTAAG Smed_0669 721425 - 720394 - | phage integrase family protein TERM 603 720909 - 720921 + g 91 -9.1 -4.40003 | opp_overlap 720908 720907 CGGCCTCCAGAAAGC GCAGG CGT CCTGC TTTCTCTTTCTGGCG TERM 604 721477 - 721445 - R 89 -16.4 -3.36273 | gap 1, opp_overlap 721446 721447, overlap 721447 GTTGCGGAACAGCAA CAGCCCGCAGCTCAA TTTC TCGAGCTGCGGGC-G TTCTTGAACCTGACT TERM 605 721446 - 721477 + r 95 -14.4 -3.63694 | opp_overlap 721445 721447, overlap 721447 TTGCGGAACAGCAAC AGCCCGCAGCTCAA TTTC TCGAGCTGCGGGCG TTCTTGAACCTGACT TERM 606 721476 - 721447 - R 100 -20.1 -3.25073 | opp_overlap 721446 721447, overlap 721445 TGCGGAACAGCAACA GCCCGCAGCTCAA TTTC TCGAGCTGCGGGC GTTCTTGAACCTGAC TERM 607 721447 - 721476 + r 89 -17.9 -2.77895 | opp_overlap 721447 721445, overlap 721446 TGCGGAACAGCAACA GCCCGCAGCTCAA TTTC TCGAGCTGCGGGC GTTCTTGAACCTGAC Smed_0670 722559 - 721501 - | porin TERM 608 722698 - 722726 + r 82 -13.3 -3.18681 | overlap 722689 CCACAGGTTCGGGGA GCGTTTCAGTG CCACGAA CACTGAAACGC TTCATCGGGTTAGGG Smed_0671 723243 - 722770 - | BA14K family protein Smed_0672 725471 - 723414 - | lytic transglycosylase catalytic Smed_0673 725763 - 726647 + | dihydrodipicolinate synthase smpB 726647 - 727126 + | SsrA-binding protein Smed_0675 727925 - 727344 - | hypothetical protein TERM 609 727589 - 727575 - G 73 -8.6 -4.08767 | GCCATCGCCGGAAAA GATCAC CAG GTGATC GACCGATTCGGATTG Smed_0676 728394 - 728801 + | DNA-directed RNA polymerase subunit omega TERM 610 728867 - 728842 - f 76 -13.3 -2.75064 | opp_overlap 728842, overlap 728839 CGCGTTATCGAAGCA GTGCGCCACTC GTGT GATTGGCGCAC TTTTTTATTTGCCTG TERM 611 728842 - 728867 + F 100 -13.3 -5.65927 | opp_overlap 728842 728839 CGCGTTATCGAAGCA GTGCGCCACTC GTGT GATTGGCGCAC TTTTTTATTTGCCTG Smed_0677 728903 - 731128 + | (p)ppGpp synthetase I, SpoT/RelA Smed_0678 731343 - 731495 + | hypothetical protein TERM 612 731505 - 731526 + F 79 -12.9 -3.21099 | overlap 731506 TTCTGATCGCGAATG CGGCGCGCC GGAA GGCGCGCCA TTGATGCTGCGCAGA TERM 613 731506 - 731525 + F 84 -16.4 -2.52516 | overlap 731505 TCTGATCGCGAATGC GGCGCGCC GGAA GGCGCGCC ATTGATGCTGCGCAG Smed_0679 731621 - 732253 + | hypothetical protein acpS 732250 - 732669 + | 4'-phosphopantetheinyl transferase TERM 614 733456 - 733478 + G 78 -5.4 -4.79352 | opp_overlap 733456 733457, overlap 733451 733457 CGTGCCGGCTGAAAA CCTGGTTGGC CGC GCCAGCCTGA TTTTCTTCTCGCTCG Smed_0681 732830 - 733573 + | signal peptidase I Smed_0682 733573 - 734289 + | ribonuclease III TERM 615 735086 - 735056 - g 71 -8.3 -3.83568 | gap 1 CGATAGCCAGAAGAA GATCGCACTCGGCA AGGG CGGCGAG-GCGATC AAGGCGATCTCGACC era 734298 - 735230 + | GTP-binding protein Era Smed_0684 736435 - 735437 - | glycerophosphoryl diester phosphodiesterase TERM 616 735549 - 735534 - G 74 -5.4 -4.61633 | ACATAGCCGGAAAAA CCTTCG GGAA CGAAAG CGAGATCATCCGCGC TERM 617 735925 - 735892 - G 76 -7.3 -4.35524 | gap 1, opp_overlap 735896 735897, overlap 735886 735885 GGTGGAAACGCAAAA GAACGGCGAG-GGTCG CGC CTTCCTCCCGCCGCTC GCTCTTGAAATTGAT Smed_0685 736931 - 738187 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 618 738532 - 738582 + G 81 -12.7 -3.72893 | gap 2, opp_overlap 738524, overlap 738533 AATCAAGGCGAGCGC CGCACAGGTTGCAGCCGCCGTCGAA TTG TTGGACGGTGG-TGCGACC-GTGCC TTTCATCGCCCGCTA TERM 619 738533 - 738581 + G 83 -16.2 -2.83522 | gap 2, opp_overlap 738524, overlap 738532 ATCAAGGCGAGCGCC GCACAGGTTGCAGCCGCCGTCGAA TTG TTGGACGGTGG-TGCGACC-GTGC CTTTCATCGCCCGCT Smed_0686 738473 - 740779 + | RNA-binding S1 domain-containing protein TERM 620 741013 - 740979 - g 77 -12.9 -3.61922 | gap 1, opp_overlap 741012, overlap 740968 740980 AACAGGCAGCGGAAA TCCT-CTTCCGCCGGG ACAC CCCGGCGAAAGGAGGT GCGTAATGGTACGCA TERM 621 741012 - 740980 - g 81 -16.4 -2.76671 | gap 1, overlap 740968 740979 ACAGGCAGCGGAAAT CCT-CTTCCGCCGGG ACAC CCCGGCGAAAGGAGG TGCGTAATGGTACGC Smed_0687 740947 - 741333 + | putative signal peptide protein TERM 622 741343 - 741394 + T 79 -13 -3.25088 | gap 1 GCCTGACGGCCACCT GAGTGGCGCGCGCAGAGGGAAGC CCGTTCA GCTTCCCTCTGC-CGCGAAGCAC TTAATCAATTTGGAG TERM 623 741441 - 741418 - T 74 -8 -4.11216 | TTTGGAGCGGGAAAA GTGTGTGCGG TTTT CCGCCCGCAC CCCGCTGTATTTCCC Smed_0688 742824 - 741511 - | UDP-glucose 6-dehydrogenase Smed_0689 743980 - 742955 - | NAD-dependent epimerase/dehydratase Smed_0690 744383 - 744051 - | regulatory protein ArsR TERM 624 744327 - 744347 + g 79 -13.9 -3.53224 | ATCGAGCATCTGCCG GCGCAGGCC GTT GGCCAGCGC TTTGAAAACAACATC TERM 625 744812 - 744794 - g 71 -6 -4.2558 | GAGTTCCTATCAAAA CTGCGA GGGCTGG TCGCAG ATGCTCGCCTGCATG Smed_0691 744435 - 744917 + | activator of Hsp90 ATPase 1 family protein Smed_0692 744929 - 745291 + | hypothetical protein TERM 626 745405 - 745432 + F 73 -12 -3.1247 | gap 1, opp_overlap 745400 GCTGAAAGAGCTCCT TCC-GCACCGCCG ACG CGGCGCTGCCGGA TTGCATCTGCCGCAT TERM 627 746045 - 746016 - g 73 -11.3 -3.55761 | overlap 746017 TATGTATCGCCGAAA TCCGGCCGCGCGA TCTG TCGCGAAGCCGGC GCCCCCTATGCCGAG TERM 628 746044 - 746017 - g 75 -14.8 -2.73243 | overlap 746016 ATGTATCGCCGAAAT CCGGCCGCGCGA TCTG TCGCGAAGCCGG CGCCCCCTATGCCGA recO 745518 - 746267 + | DNA repair protein RecO Smed_0694 748301 - 746298 - | hypothetical protein Smed_0695 748540 - 751320 + | hypothetical protein TERM 629 751603 - 751621 + G 74 -12.4 -3.46647 | opp_overlap 751583 751582, overlap 751601 CGGTCCTTGGCGACC TCGGCTGG AGC CCGGCCGA TATTTCATCCGTCGC Smed_0696 751317 - 751973 + | metal dependent phosphohydrolase Smed_0697 752052 - 752903 + | MOSC domain-containing protein Smed_0698 753031 - 754269 + | major facilitator transporter TERM 630 754284 - 754313 + F 91 -16.5 -3.59979 | ATCGGCAAAATCCCG CGATGCGTCCGTT GAGA GGCGGACGCATCG TTTCCCATCCGGCGC TERM 631 754367 - 754379 + F 100 -10.5 -5.07652 | TCTAAATCAGTCACG GCGGC TTA GCCGC TTTTGTTTTGCACCA TERM 632 754396 - 754416 + F 74 -11.3 -3.48276 | opp_overlap 754396 TTTGTTTTGCACCAA TTATGCTCA ATG TGAGCATAA TTGTATCACCGGCAC TERM 633 754576 - 754535 - g 74 -5 -4.65895 | GGCGTCATCGAAAAA CCCGATCTCGCCTTCACC CCGGCT GTCGCACGCGAGACCGAG CATCTCTACGAGAAG Smed_0699 754451 - 755530 + | quinolinate synthetase TERM 634 757040 - 757002 - g 100 -17.4 -3.55444 | TGCGGACGCGCGAAA GCCTGACCCGCGCGATCC AGG GGATCACGCGGCTCGAGC GGGCCAACAAGCGAC Smed_0700 755648 - 757246 + | L-aspartate oxidase Smed_0701 757296 - 758195 + | nicotinate-nucleotide pyrophosphorylase Smed_0702 758299 - 758817 + | superoxide dismutase copper/zinc binding Smed_0703 759859 - 758891 - | hypothetical protein TERM 635 758964 - 758991 + g 74 -9 -3.9279 | overlap 758965 758986 AAGCGGAAGAGTGCA GCCGGGCGTCCG CCGG TGGACGCCAGGG TTTCTCCGGTTGGCT TERM 636 758965 - 758990 + g 70 -12.5 -2.95192 | overlap 758964 758986 AGCGGAAGAGTGCAG CCGGGCGTCCG CCGG TGGACGCCAGG GTTTCTCCGGTTGGC TERM 637 759372 - 759383 + g 76 -7.2 -4.25104 | overlap 759362 CTCGAACGGCGCTGC GCCG CCGC CGGC TTTTCGTCGCCCGAC Smed_0704 760385 - 759849 - | hypothetical protein Smed_0705 760993 - 760388 - | hypothetical protein TERM 638 760858 - 760847 - G 76 -7.2 -4.27316 | overlap 760848 CTGGGCAACGGAAAA GGCG TGGT CGCC GGACGTCTGCCCGTT Smed_0706 761841 - 760993 - | glycine cleavage T protein (aminomethyl transferase) Smed_0707 762697 - 761951 - | hypothetical protein Smed_0708 762982 - 762713 - | hypothetical protein TERM 639 763139 - 763125 - R 70 -4.2 -4.65895 | GGGGTCACGGAAAAA GAGGTT AAT ATCCTC CTAATTTCCAAAGCG Smed_0709 763583 - 763140 - | putative signal peptide protein Smed_0710 764044 - 763580 - | NUDIX hydrolase TERM 640 764384 - 764406 + G 100 -14.8 -4.25848 | opp_overlap 764372 GAAGGCGGCATTTCG CGCGGCGATG CGC CACCGCCGCG TTTTGGTGCCGGCTT Smed_0711 764103 - 764873 + | hypothetical protein Smed_0712 765061 - 764912 - | hypothetical protein TERM 641 766489 - 766520 + G 78 -15.8 -2.78463 | opp_overlap 766481 766480, overlap 766501 TCGAAATGGCCGGTT CACGGGTCCGCCTC GGGC GAGGCGGACCCGGC TGTCGTGGCCGCGCT cysS 765466 - 766866 + | cysteinyl-tRNA synthetase TERM 642 767012 - 767038 + G 75 -11.7 -3.64703 | gap 1, opp_overlap 767011 767010, overlap 766992 GCATGTGCCAGAAGG CGAGCGGCA-AT TTCT ATCTGCCGCTCG TTTCGGTGCGCGCCG Smed_0714 766903 - 767385 + | glutathione-dependent formaldehyde-activating GFA Smed_0715 767382 - 767861 + | glutathione-dependent formaldehyde-activating GFA Smed_0716 767858 - 768358 + | glutathione-dependent formaldehyde-activating GFA Smed_0717 768355 - 769317 + | proline iminopeptidase Smed_0718 769374 - 770990 + | alpha-isopropylmalate/homocitrate synthase family transferase TERM 643 771201 - 771227 + F 70 -3.7 -4.65933 | opp_overlap 771200 CGCCGTCGATTGAAT CCGGAGC GGTTTCGCGCTTG GCTCCGG TTTATTTTCAGGATC Smed_0719 771249 - 772190 + | transporter DMT superfamily protein Smed_0720 772839 - 772222 - | hypothetical protein TERM 644 774707 - 774726 + G 86 -8.6 -4.66833 | gap 1, opp_overlap 774702 774701 GATCGAAAACCCGGA CCTGATCCG GCC CGG-TCAGG TTTTTGGGGTTCCGG Smed_0721 773082 - 774800 + | peptidoglycan-binding LysM TERM 645 776091 - 776073 - g 73 -11 -3.57144 | opp_overlap 776064 776063 TCGTCTACCGCGAAA TCCGCCAG GGG CTGACGGA TATCGAGCATATGTT Smed_0722 775094 - 776977 + | ABC transporter related Smed_0723 777084 - 777782 + | phosphatidylserine decarboxylase TERM 646 778486 - 778472 - g 72 -7.8 -4.14392 | overlap 778473 GGGCAAGTCGGAAAA CCGCGT GCG ACGCGA CCTGGTGCTGCCCGT Smed_0724 777792 - 778679 + | CDP-diacylglycerol--serine O-phosphatidyltransferase Smed_0725 778954 - 780300 + | transposase IS4 family protein Smed_0726 781107 - 780355 - | short-chain dehydrogenase/reductase SDR Smed_0727 782597 - 781107 - | amidophosphoribosyltransferase TERM 647 782727 - 782696 - R 88 -14.6 -3.60098 | gap 1, opp_overlap 782704, overlap 782698 782704 AGGCGTCATTCCAAA TA-GACAAAGCCCGC ACA GCGGGCTTTGTCGCA AACTTGTCGTCAGTC TERM 648 782724 - 782698 - R 100 -21 -3.38046 | opp_overlap 782704, overlap 782696 782704 GCGTCATTCCAAATA GACAAAGCCCGC ACA GCGGGCTTTGTC GCAAACTTGTCGTCA TERM 649 782718 - 782704 - R 93 -12.8 -4.27886 | opp_overlap 782704, overlap 782698 782696 TTCCAAATAGACAAA GCCCGC ACA GCGGGC TTTGTCGCAAACTTG TERM 650 782704 - 782718 + r 87 -12.8 -3.86822 | opp_overlap 782704 782698 782696 TTCCAAATAGACAAA GCCCGC ACA GCGGGC TTTGTCGCAAACTTG Smed_0728 783387 - 782743 - | colicin V production protein Smed_0729 784823 - 783420 - | DNA repair protein RadA Smed_0730 786170 - 784944 - | alanine racemase TERM 651 785657 - 785611 - G 72 -4.1 -4.58663 | gap 1, overlap 785613 785639 AGGACCGGCGAAAAA CTGGCGG-GCCGCACCGGGTCG TGAA CGAGCCGGAGGGCCTCCTCCGG CGACAGGCCAAGCCG TERM 652 785658 - 785639 - G 75 -15 -2.70932 | overlap 785613 785611 CCGGGTCGTGAACGA GCCGGAGG GCCT CCTCCGGC GACAGGCCAAGCCGG TERM 653 785914 - 785896 - G 84 -2.3 -5.26875 | gap 1, overlap 785897 CTGGCAACGAAAAAA TCGCGCGC GCCG GCG-GCGT AGAGGGCGGGAGCTG TERM 654 786249 - 786237 - g 71 -6.2 -4.35116 | overlap 786239 GATCTCACAGGAAAA GGCC ATCGA GGCC ATGCCGCTCGAGGGG TERM 655 786382 - 786344 - g 74 -14.7 -2.51464 | overlap 786343 TCATCACGCATGAAT TCGCGCCGCATGC-GCACG ACA CGTTCAGCAT-CGGCGCGA TCGAAGCGGGCTCTC Smed_0731 786214 - 787071 + | AraC family transcriptional regulator Smed_0732 787191 - 787844 + | AzlC family protein Smed_0733 787841 - 788143 + | branched-chain amino acid transport Smed_0734 789667 - 788168 - | replicative DNA helicase Smed_0735 789989 - 790441 + | MarR family transcriptional regulator TERM 656 791695 - 791718 + G 70 -10.3 -3.64682 | gap 1, opp_overlap 791693 791691 791690 TTCACGCAAAGCATT GGCGGCCTGA TGGGC TC-GGCCGCC TTTGGGACTTTCGTG Smed_0736 790438 - 792048 + | major facilitator transporter Smed_0737 792065 - 793132 + | secretion protein HlyD family protein TERM 657 793237 - 793200 - T 100 -23.7 -3.53012 | opp_overlap 793204 793208, overlap 793208 CTGGTGTCCCGGAAA TGAAGAAAGCCCGGACC GCGA GATCCGGGCTTTCTTCA TTGGAATCCGTTCAG TERM 658 793204 - 793233 + T 90 -16.5 -3.35992 | opp_overlap 793200 793208, overlap 793208 TGTCCCGGAAATGAA GAAAGCCCGGACC GCGA GATCCGGGCTTTC TTCATTGGAATCCGT TERM 659 793208 - 793229 + T 90 -11.5 -4.32951 | opp_overlap 793200 793208, overlap 793204 CCGGAAATGAAGAAA GCCCGGACC GCGA GATCCGGGC TTTCTTCATTGGAAT TERM 660 793229 - 793208 - T 95 -13.7 -4.39696 | opp_overlap 793208 793204, overlap 793200 CCGGAAATGAAGAAA GCCCGGACC GCGA GATCCGGGC TTTCTTCATTGGAAT rplI 793831 - 793256 - | 50S ribosomal protein L9 Smed_0739 794819 - 793866 - | hypothetical protein TERM 661 794098 - 794075 - G 71 -13.8 -2.62263 | AGGTGCCGCAGACGA GCGCACCGAC CACC GCCGGCGCGC CGCCGAAGAAGGTCA TERM 662 794624 - 794661 + g 76 -12.5 -3.53012 | CGAGCGCCACTGCTG CCCCGCCGGCTACGACG ATCC CGCCGAAGGCGGCGGCG TTTCCCCAGCCGAGG TERM 663 794866 - 794878 + r 76 -3.3 -5.02074 | overlap 794867 CGGCGATCCGCGTAG CCCCA ACA TGGGA TTTTTTGCGCCATAC TERM 664 794963 - 794931 - R 71 -12.7 -2.64803 | opp_overlap 794939 794955, overlap 794928 CCACCGCGAAAGGGA GGATCGAGGCGCCTC TTC GAGACGCTTCGATCG GAGTTGGTCTCGTTG rpsR 795257 - 795009 - | 30S ribosomal protein S18 rpsF 795720 - 795283 - | 30S ribosomal protein S6 Smed_0742 796066 - 796398 + | hypothetical protein Smed_0743 797468 - 796425 - | aldo/keto reductase TERM 665 796490 - 796512 + g 73 -11.3 -3.66018 | CGTCTTGGGAGAGCT CGACGTCGG CTGCT CCGATGTCG TTCTTCAACTGCTCC TERM 666 797706 - 797696 - H 90 -8.2 -5.00642 | overlap 797697 797698 GAATGGAGAGAAAAA CGCG GCG CGCG AGCGCGGGAAACCAA Smed_0744 797820 - 798764 + | malonyl CoA-acyl carrier protein transacylase Smed_0745 798789 - 799526 + | 3-ketoacyl-(acyl-carrier-protein) reductase NodG acpP 799846 - 800082 + | acyl carrier protein Smed_0747 800391 - 801656 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 667 801752 - 801730 - f 74 -6.9 -4.2679 | opp_overlap 801730, overlap 801731 CAATGCTCACTAAAA GCTGTCGCC GGGGT GGCGACGAC TCGGCACCGCCGCCG TERM 668 802137 - 802160 + G 76 -13.8 -3.18118 | overlap 802136 802134 802138 CCGCGGTTGTGTTCG TGGCGCTGGC GGCG GCCGGCGCCG TCTATTATGCGATGC TERM 669 802138 - 802159 + G 76 -15.1 -2.5055 | overlap 802137 802136 802134 CGCGGTTGTGTTCGT GGCGCTGGC GGCG GCCGGCGCC GTCTATTATGCGATG TERM 670 802501 - 802527 + G 85 -15.1 -3.48276 | GGTTCTGGTCGGCGA CCTGCCGGCGG AACTG CCGCCGGAAGG TTCTCTGAAACCGGA Smed_0748 801944 - 803143 + | aminodeoxychorismate lyase Smed_0749 804825 - 803185 - | thiamine pyrophosphate binding domain-containing protein TERM 671 803917 - 803946 + g 73 -10.7 -3.53811 | TCGCCCGCGCATGGC CTGTTCGGCATCG ATGT CGATGCGGATCAG TTTGCCGCCGATGCG Smed_0750 805789 - 804827 - | cobalamin synthesis protein P47K TERM 672 805562 - 805540 - G 70 -7.6 -4.07568 | opp_overlap 805549 GGCGCTCGGTCAAAA GCGCTTCGAG CTG CTCGACGAGC CCCTGGTTCAGCCCG Smed_0751 807510 - 805783 - | amidohydrolase 3 Smed_0752 809128 - 807545 - | hypothetical protein Smed_0753 809248 - 810156 + | LysR family transcriptional regulator TERM 673 810690 - 810720 + G 73 -8.2 -4.07568 | opp_overlap 810695, overlap 810693 CTCTCAGGCGGCCAG CAACAGCGCGTGGC ATT GGCGCGTGCTCTTG TTTTCGAGCCGGGGG Smed_0754 810258 - 811349 + | ABC transporter related TERM 674 811487 - 811451 - g 71 -10.8 -3.48772 | gap 1, opp_overlap 811457 AATTCTCGCAGACAA GGTCAAGCG-CGGCGAG ATGA CCCGCCGGCGCTTTGCC CAGCTCGCCGCGATG Smed_0755 811404 - 812519 + | ABC transporter, binding protein TERM 675 812554 - 812575 + G 71 -10.8 -3.45737 | overlap 812533 812551 TCCCACAATCTTGGC GCGGCGCT CCTTCT GGCGCCGC TTCTCCTGCTCCTTG Smed_0756 812527 - 813360 + | binding-protein-dependent transport systems inner membrane component Smed_0757 813363 - 814160 + | binding-protein-dependent transport systems inner membrane component TERM 676 814757 - 814703 - g 88 -14.9 -3.727 | CGGAGGAGAGCGAAA GCGAGCGCGCCGAGCGTGACGCG-GAG GTA CTCGCGGGCCTCGAA-GGCGCGCTCGC AGATCTGCGGGCGAT Smed_0758 814327 - 815214 + | hypothetical protein gmk 815218 - 815877 + | guanylate kinase ksgA 816721 - 815897 - | dimethyladenosine transferase pdxA 817749 - 816721 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 677 817013 - 816995 - G 74 -12.4 -3.53012 | GTGTCCGCCGGCAAA GGCCCGAC GAC GTCGAGCC CCTCGGCGCGCATGC TERM 678 817650 - 817636 - G 78 -7 -4.63044 | overlap 817638 ACCCACATAAAGAAA CGGCGG CGT CAGCCG ATCGGCCCGCTTCAA Smed_0762 818706 - 817759 - | SurA domain-containing protein TERM 679 818562 - 818539 - G 89 -14.6 -3.89614 | gap 1 TTGAAGGCGGAGAAA GGCGACG-CGC TTG GCGACGTCGCC GGAGGTGATAACGGT Smed_0763 821235 - 818890 - | organic solvent tolerance protein Smed_0764 822317 - 821235 - | permease YjgP/YjgQ family protein TERM 680 821587 - 821574 - G 77 -2.4 -5.09426 | overlap 821581 CGGAAGGTCAAAAAA CTGA ATAGAA TCAG CCTTTGCAAGGCGCT Smed_0765 823486 - 822314 - | permease YjgP/YjgQ family protein Smed_0766 823801 - 825294 + | leucyl aminopeptidase Smed_0767 825314 - 825763 + | DNA polymerase III subunit chi TERM 681 825885 - 825867 - T 73 -11.8 -3.14211 | opp_overlap 825866 825867 AGCGCCTCTCATCAA TCGTGGAA TGC TTCCACGA ATTTGCGGCGACCGA TERM 682 825867 - 825885 + T 70 -11.8 -2.71712 | opp_overlap 825867, overlap 825866 AGCGCCTCTCATCAA TCGTGGAA TGC TTCCACGA ATTTGCGGCGACCGA Smed_0768 826789 - 825863 - | galactose 1-dehydrogenase TERM 683 826928 - 826957 + G 78 -3.5 -5.00616 | gap 1, overlap 826925 ATCTATTTTGTCCGT CTCCTGTCGAGGCG TTC TGCCTTG-CAGCGG TTTTTTCGGCCCAGC Smed_0769 826902 - 827828 + | GCN5-related N-acetyltransferase Smed_0770 829772 - 827883 - | ABC transporter related Smed_0771 830084 - 830359 + | hypothetical protein TERM 684 830432 - 830458 + TF 100 -12.9 -4.80882 | opp_overlap 830432 GGGTTCGACCGAATA CCCCGGTTCCG CTCGT CGGCGCCGGGG TTTTTCATGTCCCCT TERM 685 831422 - 831436 + GT 100 -9.2 -5.20216 | CGATGAACATCTTTC GGCGCG CGG CGCGTC TTTTTTCGTGATGTA Smed_0773 833744 - 833232 - | DinB family protein Smed_0772 830628 - 833291 + | AMP-dependent synthetase and ligase Smed_0774 834066 - 834755 + | glutathione S-transferase domain-containing protein ndk 834856 - 835278 + | nucleoside diphosphate kinase TERM 686 835302 - 835323 + T 100 -13.7 -4.65895 | GCGAGTGATTTTCAG GCTGGGGTG GTGA CACCCCGGC TTTTTACGTCGGGCA Smed_0776 835830 - 835327 - | hypothetical protein Smed_0777 836387 - 835827 - | hypothetical protein TERM 687 836453 - 836395 - H 100 -14.1 -3.93984 | gap 2, opp_overlap 836397 836398, overlap 836396 836405 AAACCCATGCATAAA CCCCAGATCACGTTCACGCTTTCAGGTTG GAT CGCCCTGAAAGCGTGAACGTGATC-GAT- ACTGTTGGAGCGGGT TERM 688 836453 - 836396 - H 100 -20.1 -2.95668 | gap 1, opp_overlap 836397 836398, overlap 836395 836405 AACCCATGCATAAAC CCCAGATCACGTTCACGCTTTCAGGTTG GAT CGCCCTGAAAGCGTGAACGTGATC-GAT ACTGTTGGAGCGGGT TERM 689 836397 - 836455 + H 76 -12.7 -3.02461 | gap 2, opp_overlap 836395 836396 836405, overlap 836398 ACCCATGCATAAACC CCA--GATCACGTTCACGCTTTCAGGTTG GAT CGCCCTGAAAGCGTGAACGTGATCGATAC TGTTGGAGCGGGTTG TERM 690 836398 - 836452 + H 100 -23.8 -2.73875 | opp_overlap 836395 836396 836405, overlap 836397 CCCATGCATAAACCC CAGATCACGTTCACGCTTTCAGGTTG GAT CGCCCTGAAAGCGTGAACGTGATCGA TACTGTTGGAGCGGG TERM 691 836445 - 836405 - H 100 -21.3 -2.66034 | opp_overlap 836398 836397, overlap 836395 836396 ATAAACCCCAGATCA CGTTCACGCTTTCAGGTTG GAT CGCCCTGAAAGCGTGAACG TGATCGATACTGTTG TERM 692 836469 - 836490 + H 83 -7.9 -4.60041 | ACTGTTGGAGCGGGT TGCGGGTGG AAAG CCGCACGCA TTTTTCCACATCGCT Smed_0778 836577 - 837473 + | inner-membrane translocator Smed_0779 837981 - 837511 - | molybdopterin biosynthesis MoaE protein TERM 693 837949 - 837912 - G 85 -14.2 -3.59979 | opp_overlap 837902 837942 TCCGGTCACGGCAAA GCGCAGCGATCTCGAC GGCAAT GTCGAAATCGTCGCGC TGTACGCGGATGTTT Smed_0780 838246 - 837986 - | molybdopterin converting factor, subunit 1 TERM 694 838101 - 838125 + g 84 -11.4 -4.15565 | TTCTGGTGCTCGAAT GCCGCGGC ATACTCGCC GCCGCGGC TTTTCAGATGGTCGA Smed_0781 838830 - 838243 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase uvrC 841107 - 839083 - | excinuclease ABC subunit C TERM 695 840172 - 840157 - G 83 -4.6 -5.06414 | overlap 840159 CGTCCGGAAGAAAAA CACCTG AATG CAGGAG ATGCCGCCTTCGTGG TERM 696 840799 - 840841 + g 70 -10.5 -3.63515 | gap 1 AACCATGCGGGCGAT GCGGTTGGAGTGGCCGCGCC CCTG GGCGTAGCTGCTC-ACCCGC TTCTTCAGGCTGCGG Smed_0783 841868 - 841104 - | short chain dehydrogenase TERM 697 841440 - 841416 - G 73 -2.8 -4.77079 | overlap 841418 CATATAGGAATAAAA GCGCGGAT TTGGAGACC ATACGCGC TGATCGATGACATTG Smed_0784 842231 - 842869 + | porin TERM 698 842912 - 842895 - T 100 -14.1 -5.44721 | opp_overlap 842895 AGGATCCTAAAAAAA GGCCGGG GCGA CCCGGCC TTTCTTTTTGCGGTG TERM 699 842895 - 842912 + T 100 -14.1 -4.87389 | opp_overlap 842895 AGGATCCTAAAAAAA GGCCGGG GCGA CCCGGCC TTTCTTTTTGCGGTG Smed_0785 843566 - 842958 - | glutathione S-transferase domain-containing protein Smed_0786 844321 - 843563 - | ribonuclease T2 Smed_0787 844818 - 844375 - | putative signal peptide protein Smed_0788 845739 - 844870 - | hypothetical protein TERM 700 845478 - 845449 - G 84 -8.5 -4.4017 | gap 1 CGAACCGGGATAAAA CGCAAGCCC-GCCC TTG GGGTTGAGCTCGCG AACGGCGGAAAGATA TERM 701 845868 - 845858 - g 80 -4.6 -4.84311 | CGTCAGACAAGAAAA GACC ATC GGCC ATTCGGTCTGTCCAC Smed_0789 845808 - 847940 + | nitrate reductase TERM 702 848183 - 848210 + G 74 -14.2 -2.59431 | overlap 848179 TCGCCAGCTTCGCCT TCCCGTCTTCCT GCAG GGGGAGACGGGA TACCTTCTCGAGGCA Smed_0790 847968 - 848564 + | NUDIX hydrolase purN 849287 - 848625 - | phosphoribosylglycinamide formyltransferase Smed_0792 850388 - 849318 - | phosphoribosylaminoimidazole synthetase Smed_0793 850609 - 851748 + | hypothetical protein TERM 703 851861 - 851808 - f 90 -16.9 -3.4052 | gap 1 CTCCAACTCAATGAA TCGAGCACGC-CATCATCTTAGGTCG GAC CGGCCTAAAATGATGGGCGTGAGCGA GAGCGGGATGAGGAA Smed_0794 851983 - 852672 + | hypothetical protein TERM 704 854568 - 854585 + G 75 -4.1 -4.78848 | overlap 854570 CCATCGTCGGCCGCT TCCTCGA ACAT TCGAGAA TTTTCTGTTTCGGCA Smed_0795 852737 - 854947 + | polyphosphate kinase TERM 705 855779 - 855754 - g 78 -14.7 -3.05268 | opp_overlap 855752, overlap 855742 CAACGATCTCCAAGA GCCGCAGGGCA CTCT TGCCCTTCGGC GCGGTGACGATGCAG TERM 706 855843 - 855861 + G 82 -3.1 -5.12617 | opp_overlap 855817 855816, overlap 855834 TCTTTCTCCGCGCTC GGTGTCC GCGAG GGATATC TTTTTTCGCTGCTTC TERM 707 855917 - 855884 - g 70 -7.5 -4.07568 | gap 2, overlap 855885 GCTGCTTCCCGAAAA GGC-G-CGCCAGCAG GACCCG CTGCTGACGGCTGCC AATGAAATCGCCATT Smed_0796 854958 - 856481 + | Ppx/GppA phosphatase Smed_0797 857970 - 856612 - | putative signal peptide protein TERM 708 856991 - 857012 + g 81 -7.9 -4.46212 | overlap 856992 GTGCCGGCGCCGTTG TCGCGCTCG ATGA CCAGCGCGG TTTTCTCGTCGAGCA Smed_0798 859122 - 858040 - | putative adenylate/guanylate cyclase TERM 709 858926 - 858913 - G 76 -9.5 -4.03078 | overlap 858906 CGACGAGAGGAGAAA CGCCG GTGT CGGCG AGCCGTGAATCCGCC Smed_0799 860324 - 859173 - | ribonuclease D TERM 710 859421 - 859440 + g 78 -10 -4.07568 | gap 1 GCTCGCTCGCTGCCG CCACGC-CC TCC GGCGCGTGG TTTTGGCGCGGCAGG TERM 711 859634 - 859676 + g 71 -12.5 -3.06418 | opp_overlap 859626 859625, overlap 859647 TGATAATTCGCCCGC GCGGCACGTTGCGGGCGCG CGCCT CGCGTTCGCGCCAGGCCGC TACTTTCTGTAGGAC Smed_0800 861828 - 860428 - | multicopper oxidase type 3 TERM 712 861239 - 861258 + g 74 -12.1 -3.53091 | GTGCCATAGGTGCCG CCGCGCG CCGCAT CGCGCGG TTTGAAAGGGGCGAT Smed_0801 863197 - 861962 - | major facilitator transporter TERM 713 863410 - 863422 + H 75 -9.1 -4.08064 | opp_overlap 863409 863408 GCCTTGACAAAACCG GCGCA TCA TGCGC TTTTCCGCCCGACTT TERM 714 865094 - 865116 + G 70 -10.4 -3.57792 | GCGTTCCAATATGGT GCCCCGCCGC ATG GCGGCATGGC TTTCGGCATCGATCG aspS 863504 - 865291 + | aspartyl-tRNA synthetase TERM 715 865330 - 865310 - f 71 -7.5 -4.18018 | opp_overlap 865310 865303 865300, overlap 865311 TCCTTGCAGGGAAAA CCCGGCG ATGAACG CGCCGGA TTTTCGCTCGCTTCT Smed_0803 865543 - 866475 + | transposase IS116/IS110/IS902 family protein groEL 868172 - 866544 - | chaperonin GroEL Smed_0805 868500 - 868282 - | hypothetical protein TERM 716 868646 - 868623 - R 100 -15.3 -4.78572 | opp_overlap 868619 CGCGAACGAAGAAAA GCCTGGCGG TGGGGG CCGCCAGGC TCGGTCAGTTCTCGG Smed_0806 869881 - 868688 - | hypothetical protein TERM 717 868945 - 868967 + g 75 -4.1 -4.77438 | opp_overlap 868913, overlap 868963 CGGTGACGCCCTGCT GGCTGC-CGGC GTA GTCGAGC-GCC TTTTTCGTGATCGAT TERM 718 871078 - 871045 - g 72 -11.7 -3.34534 | gap 1, opp_overlap 871041 871054, overlap 871041 871037 GATATCAGAGACGAA TCGGC-CGAGGACGTC CGC GTCGTTCTCGTGCCGA AGAGCCGCTCGGTCG Smed_0807 870115 - 872391 + | DNA topoisomerase IV subunit A Smed_0808 872533 - 872871 + | regulatory protein ArsR Smed_0809 873884 - 872982 - | hypothetical protein TERM 719 873663 - 873644 - G 74 -12.1 -3.48924 | TGATGCCGTAGAGAA GGCCGGC GATCAG GCCGGCC TTGCCCGGTATCAGG Smed_0810 874667 - 873888 - | arginyl-tRNA-protein transferase Smed_0811 875227 - 874763 - | RDD domain-containing protein Smed_0812 876363 - 875350 - | delta-aminolevulinic acid dehydratase Smed_0813 876476 - 876979 + | hypothetical protein Smed_0814 877110 - 877622 + | MarR family transcriptional regulator TERM 720 877985 - 878002 + F 74 -11.3 -3.57144 | opp_overlap 877984 877979 ATGCGAAGACGTAAG GCGCATC ACAT GATGCGC TTTAGGGCTAGGGCA TERM 721 878690 - 878714 + G 72 -13.5 -2.78463 | opp_overlap 878689 878688 AGGCGGTGGAGAACG GCCGGGTGGCG CTG CGCCATACGGC TATCGTCGGCAAGAT Smed_0815 878050 - 879381 + | peptidoglycan binding domain-containing protein TERM 722 879403 - 879437 + F 100 -27.4 -4.26076 | opp_overlap 879409, overlap 879409 CTTGCATTCTGCCAT CGAAAACCGCGCCTTC GTC GAAGGCGCGGTTTTCG TTTTCATGGGGCTGC TERM 723 879431 - 879409 - f 100 -19.2 -4.18018 | opp_overlap 879403 879409 TTCTGCCATCGAAAA CCGCGCCTTC GTC GAAGGCGCGG TTTTCGTTTTCATGG TERM 724 879409 - 879431 + F 100 -19.2 -4.70319 | opp_overlap 879409, overlap 879403 TTCTGCCATCGAAAA CCGCGCCTTC GTC GAAGGCGCGG TTTTCGTTTTCATGG glyA 879563 - 880858 + | serine hydroxymethyltransferase TERM 725 881059 - 881034 - g 100 -11.1 -4.73613 | opp_overlap 881054 TGATCATCAAGAAAA CCGGCCGGAAG GTTC CTTTCGACCGG GACAAACTGTTGCGC TERM 726 881132 - 881098 - g 71 -11.4 -3.53224 | overlap 881099 GATCGCGCTTCGAAA GCGCCCGGTCGATC GTGACCG GATCGAGCGGGCGG TCTCAGGCATCGTCC TERM 727 881131 - 881099 - g 75 -14.9 -2.71791 | overlap 881098 ATCGCGCTTCGAAAG CGCCCGGTCGATC GTGACCG GATCGAGCGGGCG GTCTCAGGCATCGTC Smed_0817 880871 - 881344 + | transcriptional regulator NrdR TERM 728 881967 - 881922 - g 78 -14.7 -3.0094 | gap 1, overlap 881935 GCTCAGGTACAGATA TTGC-GTGCCGAAACCGACGCG ATC CTCGTCGGCATCGGCACGGCGA GCGCTGACGATCCGG Smed_0818 881361 - 882557 + | riboflavin biosynthesis protein RibD Smed_0819 882557 - 883177 + | riboflavin synthase subunit alpha TERM 729 883235 - 883261 + T 78 -3.7 -4.87665 | gap 1, overlap 883235 883236 AATGAGTTGAGACGC G-GGATGCGG GCGGAGAA CCGCGTCCAC TTTTTCTCAATCCCG Smed_0820 883842 - 883300 - | GCN5-related N-acetyltransferase TERM 730 883482 - 883519 + g 77 -13.3 -3.61715 | overlap 883481 CGGCCCAGGCGAGGG CCGCGGTCACGGCTTCG GTCG CGAGGCCGCGGCCATGG TTCTTCGGGGAAATC ribH 884070 - 884531 + | riboflavin synthase subunit beta nusB 884528 - 885010 + | transcription antitermination protein NusB TERM 731 885220 - 885239 + G 73 -7 -4.37886 | TCTCGGGATGGCCCT CGGCGTCG TGCT CGTTGCCG TTTTGTCGCGACTGA TERM 732 886181 - 886196 + G 70 -10.4 -3.56593 | overlap 886174 GCTGTGTGGCCGGTT GCAGGC TTTT GCCTGC TTCTCCTTCTACCGT Smed_0823 885017 - 886243 + | major facilitator transporter TERM 733 886376 - 886353 - f 75 -8.8 -4.07568 | gap 1, opp_overlap 886350 886353, overlap 886354 GCCGCGCCGCGAAAA TGCGCCG-CTC GAG GAGGCGGCGCG TGATTCGTGGAGAGG TERM 734 886375 - 886354 - f 73 -12.3 -3.04398 | gap 1, opp_overlap 886353 886350, overlap 886353 CCGCGCCGCGAAAAT GCGCCG-CTC GAG GAGGCGGCGC GTGATTCGTGGAGAG TERM 735 887613 - 887639 + G 74 -14.5 -2.62983 | gap 1 TCGAGTCGACCGCCT TGCCGGCCATCG TCAT CG-TGGCCGGCA TCATCTCGACATACC hppA 886442 - 888577 + | membrane-bound proton-translocating pyrophosphatase TERM 736 888641 - 888681 + T 100 -23.5 -3.37612 | opp_overlap 888642 888645 888649, overlap 888642 888645 888649 CATTCCAGCGCAAAT AGAAGAAAGCCCGCGAGAT CCG GTCTCGCGGGCTTTCTTCG TTCGTTCCGGTTCGG TERM 737 888642 - 888680 + T 100 -27 -2.62246 | opp_overlap 888642 888645 888649, overlap 888641 888645 888649 ATTCCAGCGCAAATA GAAGAAAGCCCGCGAGAT CCG GTCTCGCGGGCTTTCTTC GTTCGTTCCGGTTCG TERM 738 888680 - 888642 - T 100 -26.3 -3.38224 | opp_overlap 888641 888642 888645 888649, overlap 888645 888649 ATTCCAGCGCAAATA GAAGAAAGCCCGCGAGA TCCGG TCTCGCGGGCTTTCTTC GTTCGTTCCGGTTCG TERM 739 888645 - 888677 + T 100 -22.9 -3.45634 | opp_overlap 888645 888642 888649, overlap 888642 888641 888649 CCAGCGCAAATAGAA GAAAGCCCGCGAGAT CCG GTCTCGCGGGCTTTC TTCGTTCGTTCCGGT TERM 740 888677 - 888645 - T 100 -22.2 -3.82946 | opp_overlap 888642 888641 888645 888649, overlap 888642 888649 CCAGCGCAAATAGAA GAAAGCCCGCGAGA TCCGG TCTCGCGGGCTTTC TTCGTTCGTTCCGGT TERM 741 888673 - 888649 - T 100 -17.2 -4.52143 | opp_overlap 888645 888642 888641 888649, overlap 888645 888642 CGCAAATAGAAGAAA GCCCGCGAGA TCCGG TCTCGCGGGC TTTCTTCGTTCGTTC TERM 742 888649 - 888673 + T 100 -17.9 -4.36343 | opp_overlap 888649 888645 888642, overlap 888645 888642 888641 CGCAAATAGAAGAAA GCCCGCGAGAT CCG GTCTCGCGGGC TTTCTTCGTTCGTTC Smed_0825 889208 - 888702 - | SmpA/OmlA domain-containing protein Smed_0826 889366 - 889902 + | ubiquinol-cytochrome C chaperone Smed_0827 889986 - 890537 + | hypothetical protein Smed_0828 890733 - 891776 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 743 892203 - 892219 + G 73 -3 -4.67556 | gap 1, overlap 892211 GCCACACGCGTGCTG GTCATCG GCGC CGA-GAC TTTTTCGCGTATTCT Smed_0829 891795 - 892766 + | 3-oxoacyl-(acyl carrier protein) synthase III ihfA 892860 - 893198 + | integration host factor subunit alpha TERM 744 893356 - 893338 - g 84 -4.5 -5.13473 | ATCACATGGAAAAAA GTCCGGA TGCTT TCCGCAC CATCAGTGAGGTCGC TERM 745 893672 - 893720 + G 84 -4.4 -5.13722 | gap 1, opp_overlap 893683 893703, overlap 893684 893700 AGCGGGCGTCGTGGA GGAGGATCAGATCGTCGGTCGCC CCAA GGC-ACCGGCGAGCCGGCGCTTC TTTTCTTTTACTGGC TERM 746 893700 - 893717 + G 86 -8.3 -4.64486 | opp_overlap 893683 893703, overlap 893684 893672 GTCGGTCGCCCCAAG GCACCGG CGAG CCGGCGC TTCTTTTCTTTTACT Smed_0831 893328 - 893861 + | MerR family transcriptional regulator Smed_0832 894276 - 893929 - | hypothetical protein TERM 747 893958 - 893983 + g 76 -14.1 -3.15544 | CTTCAGTCGACCGCT GCTCTTTCTGC TGCT GCAGAAGGAGC TTGCTCGACGTCGAC TERM 748 894475 - 894514 + H 81 -15.2 -2.68755 | gap 1, opp_overlap 894470, overlap 894479 894513 GGCTAACGGATTTTT CCGCCTGACCCAAAAATTG GGT CAGT-TTTGGGTCAGGCGA TGCTATCATCCTTCT TERM 749 894479 - 894499 + H 100 -14.1 -4.18018 | opp_overlap 894470, overlap 894475 AACGGATTTTTCCGC CTGACCCAA AAA TTGGGTCAG TTTTGGGTCAGGCGA Smed_0833 894514 - 894891 + | hypothetical protein Smed_0834 895430 - 895567 + | hypothetical protein TERM 750 895569 - 895558 - f 78 -3.6 -4.98436 | TCAAGACGAGAAAAA GGCC AAAT AGCC ACCCAGGTAACCCGC TERM 751 895584 - 895611 + F 100 -14.2 -4.13728 | opp_overlap 895580, overlap 895605 CACCCAGGTAACCCG CCCGCCGGAA TAATGAGT TTCCGGCGGG TTTTCGGCGTCTGTC Smed_0835 895658 - 896281 + | hypothetical protein Smed_0836 896291 - 897025 + | hypothetical protein Smed_0837 897547 - 897326 - | hypothetical protein Smed_0838 898164 - 897544 - | hypothetical protein Smed_0839 899362 - 898469 - | LysR family transcriptional regulator TERM 752 899035 - 899018 - G 76 -6.3 -4.46854 | gap 1 GTACTCAAGAAGAAA TGGCGCGA GCT TCG-GCCA GAGGATCGTATCGAT Smed_0840 899489 - 899878 + | antibiotic biosynthesis monooxygenase Smed_0841 899914 - 900327 + | antibiotic biosynthesis monooxygenase Smed_0842 900347 - 901519 + | aldo/keto reductase Smed_0843 901594 - 902373 + | carboxymuconolactone decarboxylase Smed_0844 902527 - 902901 + | hypothetical protein TERM 753 903122 - 903099 - f 72 -6 -4.34737 | gap 1, overlap 903100 903101 GGACGAATGAAGAAA TGGTCGGCGAA GCG TTCGCCGGC-A TGCGGGACAAGGTGA Smed_0846 903957 - 905057 + | glucose sorbosone dehydrogenase Smed_0847 905146 - 905607 + | cupin 2 domain-containing protein Smed_0848 906114 - 905941 - | hypothetical protein TERM 754 906140 - 906124 - H 70 -2.1 -4.7261 | opp_overlap 906133, overlap 906126 906127 ATCCACGAAAAGAAA GATGCCG CTT CGCCAGC GGTCGACTTCTGATA TERM 755 906527 - 906544 + H 86 -5.5 -5.16237 | gap 1, opp_overlap 906516 906527 906519, overlap 906530 AATACGACGAAATTA GTC-GCCG CTC CGGCTGGC TTTTTTCGTAGGATT TERM 756 906848 - 906861 + G 71 -5.2 -4.4767 | CATTATTACACGCAC GGCC GGATAG GGCC TTTTGTGGTGAATGC Smed_0849 906704 - 907738 + | alcohol dehydrogenase TERM 757 907750 - 907784 + T 88 -11.4 -4.1822 | opp_overlap 907750 GTAGGGTTCACGGAA CTCCTCCCGTGACG CGTCTTT CGGTGCGGGAGGAG TTTCTTCAGCTCAAG Smed_0850 909126 - 907846 - | hypothetical protein Smed_0851 910766 - 909123 - | undecaprenyl-phosphate galactose phosphotransferase Smed_0852 911913 - 910744 - | glycosyl transferase group 1 Smed_0853 912494 - 911919 - | polysaccharide export protein TERM 758 912460 - 912449 - G 71 -5.8 -4.37886 | opp_overlap 912455 CGAGCGCCGACAAAA TCGC CACG GCGA AGACGCTTATTTTCG Smed_0854 912695 - 914824 + | exopolysaccharide transport protein family Smed_0855 916130 - 914880 - | hypothetical protein TERM 759 915364 - 915394 + g 71 -13.3 -3.05384 | opp_overlap 915380, overlap 915389 AAAAATGCGCGTGTC TCGGCTTGCCGAA AAGCG TCCGGCAGGCCGA TTGCCTCGAAGCGGG TERM 760 915881 - 915863 - G 81 -7.4 -4.49389 | ACGGGAGAAGGAAAA GCGGCT CCTTGCC AGCCGC GCCGCGCACGATCAG Smed_0856 917021 - 916281 - | metallophosphoesterase Smed_0857 917265 - 917041 - | putative signal peptide protein Smed_0858 917444 - 918547 + | cytochrome oxidase assembly TERM 761 918610 - 918572 - T 100 -23.3 -3.06696 | opp_overlap 918576 918579, overlap 918574 918576 918579 TCTGTGGTTAAGATA GACAGAAGCCCCGGAAG GGAGG CTGCCGGGGCTTCTGTC TGCCGGGTCTCAGGC TERM 762 918608 - 918574 - T 100 -20.1 -3.09273 | opp_overlap 918576 918579, overlap 918572 918576 918579 TGTGGTTAAGATAGA CAGAAGCCCCGGAAG GGAGG CTGCCGGGGCTTCTG TCTGCCGGGTCTCAG TERM 763 918606 - 918576 - T 89 -16.9 -3.10493 | opp_overlap 918576 918579, overlap 918574 918572 918579 TGGTTAAGATAGACA GAAGCCCCGGAAG GGAGG CTGCCGGGGCTTC TGTCTGCCGGGTCTC TERM 764 918576 - 918606 + T 88 -16.9 -2.88249 | opp_overlap 918576 918574 918572 918579, overlap 918579 TGGTTAAGATAGACA GAAGCCCCGGAAG GGAGG CTGCCGGGGCTTC TGTCTGCCGGGTCTC TERM 765 918603 - 918579 - T 84 -12.8 -3.69083 | opp_overlap 918576 918579, overlap 918576 918574 918572 TTAAGATAGACAGAA GCCCCGGAAG GGAGG CTGCCGGGGC TTCTGTCTGCCGGGT TERM 766 918579 - 918603 + T 81 -12.8 -3.58905 | opp_overlap 918579 918576 918574 918572, overlap 918576 TTAAGATAGACAGAA GCCCCGGAAG GGAGG CTGCCGGGGC TTCTGTCTGCCGGGT Smed_0859 919552 - 918620 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 767 919509 - 919465 - G 73 -11.5 -3.551 | gap 1, opp_overlap 919474, overlap 919466 CCGGAATGGACAGAA GCTCG-AGATCCGTACGCCC GGCCAT GCGCGTACGGATCTGCAGGC CCGTCGTGCCGTGTT Smed_0860 920602 - 919646 - | agmatinase TERM 768 920728 - 920710 - R 100 -13.1 -4.72986 | CATGCGCATGAAAAA GGCCGGG ACAAG CCCGGCC TTCGAAAGTGCGGTC rpsI 921222 - 920755 - | 30S ribosomal protein S9 rplM 921689 - 921225 - | 50S ribosomal protein L13 TERM 769 921492 - 921506 + g 72 -4.2 -4.62872 | GTCGGTGTACTTCTT GCCG GTGAGGA CGGC TTTTTCGGCATTGAT TERM 770 921792 - 921767 - R 73 -3.1 -4.85599 | overlap 921770 921772 CCGATGGGACAAAAA GAAGACGGCCC AGTC GGACCGCGATC TGGGGCAGCTTATAC TERM 771 921788 - 921770 - R 70 -4.5 -4.53475 | gap 1, overlap 921767 921772 ATGGGACAAAAAGAA GACGGCCC AGTC GGACCG-C GATCTGGGGCAGCTT Smed_0863 922338 - 921895 - | thioesterase superfamily protein Smed_0864 922502 - 923323 + | enoyl-CoA hydratase Smed_0865 924274 - 923387 - | hypothetical protein Smed_0866 924507 - 924941 + | CoA-binding domain-containing protein Smed_0867 924979 - 926259 + | O-acetylhomoserine aminocarboxypropyltransferase TERM 772 926522 - 926474 - g 90 -17.7 -3.10464 | gap 1, opp_overlap 926466 926463, overlap 926466 926511 CGACGAATGGGAATA CTTCCACATCCTCTTCGGTCAC TCGATC GTGACCGAAGAGGATGGAGA-G CCCCTTCACCTCAAA Smed_0868 926286 - 926627 + | protein of unknown function DUF861 cupin_3 Smed_0869 927936 - 926689 - | cytochrome P450 TERM 773 926851 - 926874 + g 70 -10.2 -3.57106 | opp_overlap 926848 GCAGAAATGAAGGCC GGCGCCGAAG GAGA CATTGGCGCC TTCATTTCGGTTCGG Smed_0870 928108 - 928971 + | endonuclease/exonuclease/phosphatase TERM 774 929858 - 929876 + G 86 -11.6 -4.18018 | GCTGGACCAGTTGGC GCGCACGG CCG CCGGGCGC TTTTACCTGGAAAAG TERM 775 929949 - 929891 - g 84 -10.9 -4.11216 | gap 2 CTTTTACCTGGAAAA GGTTCAGGATGCAGCCGCCGC-G-GGGCC GGG GGCCTACTGGGGCAGCCGCACCCTCTACC GAAGCGCGAATCTGC TERM 776 930591 - 930610 + G 81 -7.8 -4.42788 | overlap 930593 GGCCTTTTCCGAAGG CTGATCGC CGGC GCGATCCG TTTTCTGCCCTTGGA Smed_0871 929076 - 930638 + | phospholipase D/transphosphatidylase clpP 930911 - 931537 + | ATP-dependent Clp protease proteolytic subunit TERM 777 931537 - 931550 + F 85 -9.5 -4.52589 | opp_overlap 931537 CGAGGGCATGGAATA GCCCG AACA CGGGC TTTTGTGTCGCCACA TERM 778 931599 - 931621 + F 71 -12.8 -2.56728 | overlap 931598 TTGTAATGGCGAAGG GGCTTTATCC GAG GGGTAAAGCC GTTAATATGAATCCT clpX 931831 - 933108 + | ATP-dependent protease ATP-binding subunit TERM 779 933136 - 933152 + F 95 -10.8 -4.74801 | opp_overlap 933136 ACGATTGTTTGAAGA GCCCGC CATGT GCGGGC TTTTTCATGGGATTG TERM 780 933574 - 933564 - g 72 -2.4 -4.76123 | overlap 933553 AAATGACGAACAAAA CGTC TCC GGCG ACTGAAAGCGCGACC TERM 781 935272 - 935257 - g 80 -4.6 -4.87626 | overlap 935258 GGGCAAGACCAAAAA GGTCGA AGTC TCGGCC GAGAACATCAACGAC Smed_0874 933551 - 935971 + | ATP-dependent protease La TERM 782 936027 - 936059 + F 100 -19.3 -3.28791 | opp_overlap 936027 936034, overlap 936034 CTTTGCCCAGAAAAA CAAGGAAGACCGGCG CTT CGCCGGTCTTTTTTG TTGTAAAAGCACGCT TERM 783 936059 - 936027 - f 100 -14.9 -4.82901 | opp_overlap 936027 936034, overlap 936034 CTTTGCCCAGAAAAA CAAGGAAGACCGGCG CTT CGCCGGTCTTTTTTG TTGTAAAAGCACGCT TERM 784 936034 - 936052 + F 100 -16 -5.55769 | opp_overlap 936034 936027, overlap 936027 CAGAAAAACAAGGAA GACCGGCG CTT CGCCGGTC TTTTTTGTTGTAAAA TERM 785 936052 - 936034 - f 100 -16 -3.77278 | opp_overlap 936027 936034, overlap 936027 CAGAAAAACAAGGAA GACCGGCG CTT CGCCGGTC TTTTTTGTTGTAAAA Smed_0875 936193 - 936465 + | histone family protein DNA-binding protein TERM 786 936563 - 936585 + F 100 -16.3 -4.3467 | GTAGGCAGGTAGATT GAGGCCCGG TTGTC CCGGGCCTC TTTTCATCTCAAGCT TERM 787 938185 - 938167 - g 76 -8.1 -4.1899 | CGACGCCACGCAAAA GCCTGCG CTGAT CACAGGC GCCCTGCCGATCACC Smed_0876 936710 - 938905 + | hypothetical protein Smed_0877 939485 - 939006 - | MarR family transcriptional regulator Smed_0878 939774 - 941051 + | metallophosphoesterase TERM 788 941552 - 941568 + G 93 -7.9 -5.00616 | ATCCTGACGGACCTT CGAGCCG ATG CGGATCG TTTTTTCCGCCCGCA TERM 789 944430 - 944415 - g 70 -10.4 -3.5594 | opp_overlap 944413 AACTGATGGCGGAAA TGGCCG AAGT CGGCCA GGTGATCTATCTGAC Smed_0879 941051 - 944512 + | hypothetical protein Smed_0880 944588 - 944986 + | cupin 2 domain-containing protein Smed_0881 945065 - 945367 + | hypothetical protein Smed_0882 945395 - 945748 + | hypothetical protein TERM 790 945773 - 945752 - T 87 -15.1 -3.41051 | opp_overlap 945753 CCACTGGGATGAGAA CCGCGCCGC GCCT GCAGCGCGG AAGAGCTTTTCAGCC Smed_0883 947315 - 945840 - | HlyD family type I secretion membrane fusion protein TERM 791 946408 - 946449 + g 77 -13.6 -3.30124 | CTAAGCTGTTGTTCC TGCTCGTCCGCGCGCCGG GCGACA TCGGCACGCTGGCGGGCA TTCTCGGCGATGAAC TERM 792 947169 - 947153 - G 91 -9.3 -4.42788 | overlap 947155 TCCAACTCCATAAAA GCGCGCC GGC GGCGAGC GCACACAGGAGCCAG Smed_0884 949492 - 947312 - | type I secretion system ATPase TERM 793 949597 - 949572 - R 77 -11.7 -3.61715 | overlap 949556 949573 949586 GATTGCGTTGAACAA TCCCCGCGGAC GAAC GGCCGCGGGGC TCCGGTCCCCCGTCA TERM 794 949596 - 949573 - R 83 -15.2 -2.76815 | overlap 949556 949572 949586 ATTGCGTTGAACAAT CCCCGCGGAC GAAC GGCCGCGGGG CTCCGGTCCCCCGTC Smed_0885 951976 - 949610 - | hypothetical protein TERM 795 950854 - 950870 + gr 73 -3 -4.74801 | TTTTTGCCTTGGCGA CATCGT AGAAG ATGATG TTTTTGGTGCCGTTA TERM 796 951548 - 951561 + gr 74 -5.9 -4.51097 | opp_overlap 951548 GGCAGGGTCGTAAAG CGTGG TCGT CCGCG TTTTGTCGTCGTTGA TERM 797 951601 - 951581 - GR 77 -13.3 -2.87132 | opp_overlap 951579 951578 951593 GTCGTCGTTGAGATA GGAGCGTTG CGT CAACGCCCC GGCTTTGTCGTTGAG TERM 798 951625 - 951636 + gr 71 -5.8 -4.32046 | CGTTGAGGTCCGTCT GCTG CGCC CAGC TTTGCTTTTTGGCGA Smed_0886 958143 - 951802 - | hypothetical protein TERM 799 952691 - 952718 + gr 74 -6.9 -4.26076 | gap 1, overlap 952691 GAGACGAGTTCGCTC CGGCCGTCGGCG CTCAC CTTCG-CGGCCG TTTTGCTCCGGATCG TERM 800 953949 - 953963 + gr 77 -10 -3.8211 | overlap 953936 TGCTGCCGTCGGCAT TGACGG TGG CCGTCA TTGTTCTGGATCGCG Smed_0887 958978 - 958178 - | hypothetical protein TERM 801 958419 - 958433 + g 81 -4.2 -4.9725 | opp_overlap 958406 958407 AAGGTCTTCCCCATC CGGC AGGAGAA GCCG TTTTTCTCTAGGGAT TERM 802 958854 - 958868 + g 76 -6.4 -4.43189 | overlap 958861 ATGTTGCGAGCGCCG TTCCGC CCG GTGGAA TTTTCTGCCGTTCCT TERM 803 960004 - 959989 - H 71 -10.4 -3.56273 | CCGATGATGAGATAA TGGCCG GTGA CGGCCA TAATGCGCGGGTGTA TERM 804 960220 - 960251 + H 84 -12.9 -3.6502 | CCGCGAATCCTGCGG CCGGTGCACGGCG GCTATG CGCCGCGAACCGG TTTAAATGCCCCATC TERM 805 960363 - 960349 - H 72 -8.5 -3.86015 | CATTCTTCGCAGAAA GCGCC TTCGT GGCGC GCCCCTCCGCAGGCA Smed_0888 960392 - 960757 + | NADH dehydrogenase subunit A Smed_0889 960748 - 961326 + | NADH dehydrogenase subunit B Smed_0890 961345 - 961950 + | NADH dehydrogenase subunit C Smed_0891 962007 - 963197 + | NADH dehydrogenase subunit D Smed_0892 963197 - 963451 + | putative signal peptide protein TERM 806 963554 - 963533 - g 81 -8 -4.45544 | GTTCAGCAAGGAAAA CGCTGCCT GGGCCG AGGCAACG ATCAAGAAATACCCC Smed_0893 963468 - 964289 + | NADH dehydrogenase subunit E TERM 807 965594 - 965562 - g 70 -11.9 -3.17529 | overlap 965545 965560 965558 GGATAGACGAATACA CCCGCAACGCGACTT CGC AAGGCGCGGTGCTGG AGGCAGCGGAGTAAG Smed_0894 964304 - 965608 + | NADH dehydrogenase I subunit F TERM 808 965921 - 965908 - g 71 -8.1 -3.87075 | overlap 965909 AGCACCCTGCAGAAA GGCGT CGCA ACGCC GCAAAAGGCAGAGCC TERM 809 965969 - 965928 - g 100 -17.3 -4.11484 | opp_overlap 965945, overlap 965929 965932 CGCAACGCCGCAAAA GGCAGAGCCTTCGAAGCCG GCTC CGGCTCCGAAGGCTCCGGT ACCCGTTGCTCCGGC TERM 810 965968 - 965929 - g 93 -20.8 -3.06569 | opp_overlap 965945, overlap 965928 965932 GCAACGCCGCAAAAG GCAGAGCCTTCGAAGCCG GCTC CGGCTCCGAAGGCTCCGG TACCCGTTGCTCCGG TERM 811 965965 - 965932 - g 100 -23.3 -2.74784 | opp_overlap 965945, overlap 965929 965928 ACGCCGCAAAAGGCA GAGCCTTCGAAGCCG GCTC CGGCTCCGAAGGCTC CGGTACCCGTTGCTC Smed_0895 965614 - 966276 + | putative NADH dehydrogenase I chain E Smed_0896 966399 - 968480 + | NADH dehydrogenase subunit G TERM 812 968703 - 968747 + G 70 -10.6 -3.57406 | opp_overlap 968703 968702, overlap 968701 CCGACCTTCTGAAAT TCGTCTTCAAGGAGCCGGTC ATTCC GGCCGGCGCCAACAAGACGA TCTTTCTGCTCGCGC Smed_0897 968501 - 969544 + | NADH dehydrogenase subunit H Smed_0898 969609 - 970100 + | NADH dehydrogenase subunit I TERM 813 970170 - 970188 + F 81 -11.7 -3.68529 | CGGGTTTGGGCATCA GCCGGAC AGGTG GTCCGGC TTTGCCTCATGGAGT TERM 814 970253 - 970266 + G 95 -2.3 -5.77988 | AAAGGCACCGATCAT GGGTC TGCA GGCTC TTTTTTTCTATCTCT Smed_0899 970197 - 970865 + | NADH dehydrogenase subunit J Smed_0900 970895 - 971203 + | NADH dehydrogenase subunit K Smed_0901 971211 - 973205 + | NADH dehydrogenase subunit L Smed_0902 973205 - 974716 + | NADH dehydrogenase subunit M Smed_0903 974736 - 976178 + | NADH dehydrogenase subunit N Smed_0904 976175 - 976942 + | biotin--acetyl-CoA-carboxylase ligase Smed_0905 976968 - 978635 + | beta-lactamase domain-containing protein Smed_0906 978692 - 979096 + | methylmalonyl-CoA epimerase TERM 815 979175 - 979198 + F 80 -4.4 -4.93365 | overlap 979182 TCTGCCTCTTTGAAG CTGCGGGCGG AAAA CCGCATACAG TTTTTCGTTATCCCG Smed_0907 979229 - 979498 + | hypothetical protein TERM 816 979762 - 979777 + F 82 -9 -4.51196 | opp_overlap 979762, overlap 979757 AAAACCAAAAAAAAA CAAGGC CAAA GCCTTG TTTTCTAAGTTTCGC TERM 817 979777 - 979762 - f 100 -9 -6.31682 | opp_overlap 979757 979762 AAAACCAAAAAAAAA CAAGGC CAAA GCCTTG TTTTCTAAGTTTCGC Smed_0908 980177 - 981469 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Smed_0909 981795 - 981466 - | Rieske (2Fe-2S) domain-containing protein Smed_0910 983138 - 981897 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 818 983182 - 983226 + r 83 -15 -2.81464 | gap 1, overlap 983184 GTTTAGGTGAAGCGT GGCGCGTGCGGTCGAAGAAGC ATCC GTGCCTTCG-CCGCACGCGTC TATCCTCGGTCGTGC TERM 819 983184 - 983224 + r 77 -14 -2.95476 | gap 1, overlap 983182 TTAGGTGAAGCGTGG CGCGTGCGGTCGAAGAAGC ATCC GTGCCTTCG-CCGCACGCG TCTATCCTCGGTCGT TERM 820 983282 - 983313 + r 100 -11.6 -5.06414 | gap 1, opp_overlap 983279 983280 GGGCAGAAGACAGCC GGGT-TGCAGCGCCG GTT CAGCGCTGCAGACTC TTTTTCTTGAAGCGC Smed_0911 984296 - 983298 - | sterol desaturase Smed_0912 984450 - 984289 - | hypothetical protein Smed_0913 985313 - 984447 - | xylose isomerase domain-containing protein Smed_0914 986414 - 985404 - | monosaccharide-transporting ATPase Smed_0915 987166 - 986411 - | ABC transporter related Smed_0916 988253 - 987231 - | putative periplasmic binding ABC transporter protein TERM 821 988383 - 988363 - R 86 -5.4 -5.06816 | gap 1, opp_overlap 988364 988365 988368, overlap 988364 988365 ATCGGCCAAGAAAAA CGGCACGGC TTTC GCCGT-CCA TTCTCGATGTGCGAA Smed_0917 989578 - 988586 - | regulatory protein LacI TERM 822 989270 - 989230 - G 74 -11.8 -3.46602 | opp_overlap 989259 989260 GGCCGTAGACGATAA TCGCGTTGCAGCGGCTAT TCCGG ATCGCCGCCGCGACGAGA TCGGGCTTGGTTTCG TERM 823 989764 - 989751 - H 87 -9.5 -4.63218 | TTTGCCTGAAGAAAA CCCGG GTGT CCGGG GGGCAGGAAAGCGAC TERM 824 989801 - 989817 + H 72 -5.7 -4.41348 | AAGCCCCCGAACATC CTCCGCC GGC GGCAGGG TTTCTTTCCGCGCAC Smed_0918 990004 - 991332 + | prolyl-tRNA synthetase Smed_0919 991351 - 992661 + | LolC/E family lipoprotein releasing system, transmembrane protein Smed_0920 992679 - 993365 + | ABC transporter related TERM 825 993933 - 993905 - g 75 -11.8 -3.61398 | overlap 993910 CTTGCCCTTGAAGAA GATCATCGGCAA GGCGA TCGCCGACGATC AGCCGGCGATCGGTA TERM 826 993955 - 993910 - g 70 -12.6 -2.85545 | gap 1, overlap 993905 CCTTGAAGAAGATCA TCGGCAA-GGCGATCGCCGAC GATCA GCCGGCGATCGGTATCGCCGA CACCAATAACCTCTT TERM 827 994444 - 994466 + G 74 -4.9 -4.62069 | gap 1 ATCGGCTCGACGTTC CG-CTCGTTG CCAC CAATGAGGCG TTTTTCCCGTCGCCG TERM 828 995678 - 995654 - g 75 -14.3 -2.75975 | opp_overlap 995651, overlap 995651 995656 CCCGAAGACATATGA GACCCTCTCGC GCG GCGAGACGGTC GGCGTGTTCCAGGTG dnaE 993789 - 997286 + | DNA polymerase III subunit alpha Smed_0922 998555 - 997329 - | hypothetical protein Smed_0923 999973 - 998681 - | DNA polymerase IV Smed_0924 1000419 - 1000147 - | hypothetical protein Smed_0925 1000576 - 1000947 + | response regulator receiver protein TERM 829 1001897 - 1001936 + G 71 -13.7 -2.53581 | gap 2, opp_overlap 1001893 1001892 TCACTTGAAACTGCT GATCGATCGTGCGGGCGCC CGAG GGCGTCCGC-TG-TCGATC TGCATTACCGATATC TERM 830 1002058 - 1002023 - g 81 -14 -3.55444 | gap 1, opp_overlap 1002016 1002051 1002052, overlap 1002024 1002027 GCGCGAGTTCGCAAA CCGA-GTCCGCGCAACG GTG CGTGGCGCGGACCTCGC CTGCCGGTTCGGTGG TERM 831 1002057 - 1002024 - g 84 -17.5 -2.73124 | gap 1, opp_overlap 1002016 1002051 1002052, overlap 1002023 1002027 CGCGAGTTCGCAAAC CGA-GTCCGCGCAACG GTG CGTGGCGCGGACCTCG CCTGCCGGTTCGGTG TERM 832 1002053 - 1002027 - g 86 -18 -2.64472 | opp_overlap 1002016 1002051 1002052, overlap 1002024 1002023 GAGTTCGCAAACCGA GTCCGCGCAACG GTG CGTGGCGCGGAC CTCGCCTGCCGGTTC pleD 1000965 - 1002332 + | response regulator PleD TERM 833 1002659 - 1002694 + T 100 -22.8 -3.62476 | opp_overlap 1002666, overlap 1002666 CCAGCCGACCCCCAT TCGAAAACGCCGCTTC GAAA GAGGCGGCGTTTTCGA TTGTGTCGTTCGTTC TERM 834 1002687 - 1002666 - T 88 -11.5 -4.13945 | opp_overlap 1002659 1002666 ACCCCCATTCGAAAA CGCCGCTTC GAAA GAGGCGGCG TTTTCGATTGTGTCG TERM 835 1002666 - 1002687 + T 95 -13.7 -4.34267 | opp_overlap 1002666, overlap 1002659 ACCCCCATTCGAAAA CGCCGCTTC GAAA GAGGCGGCG TTTTCGATTGTGTCG TERM 836 1002832 - 1002810 - T 100 -16.2 -5.30616 | GGACGCAAAGAAAAA GCGCCGGCCC CGA GGGGCGGCGC TCCGGGATCGAAGTA rpmG 1003025 - 1002858 - | 50S ribosomal protein L33 Smed_0928 1004305 - 1003121 - | major facilitator transporter TERM 837 1004350 - 1004338 - R 71 -10.5 -3.5764 | AAGCGTACGGTGAAA GCGCC CGT GGCGC GTAAAATAAAATGGA Smed_0929 1005033 - 1004317 - | NUDIX hydrolase Smed_0930 1005485 - 1005030 - | hypothetical protein Smed_0931 1007889 - 1005520 - | ribonuclease R TERM 838 1005607 - 1005617 + g 78 -6.8 -4.58395 | GTGGAACGAGCGCAT TGCC GTC GGCA TTTTTCGCCCCTCGC TERM 839 1007102 - 1007118 + g 72 -4.4 -4.57569 | overlap 1007100 CCATGCGCGTGGATC GCGATC ATCGA GATTGC TTTTTCGGACGCTAC TERM 840 1007802 - 1007830 + g 100 -10.2 -5.10461 | gap 1 TCGTCTCCTTCTCCC CGGCCG-GTGCCG TCCT CGCCGCGCGGCCG TTTTTCTTGCCTGCA Smed_0932 1010636 - 1007892 - | DNA topoisomerase I Smed_0933 1011938 - 1010787 - | DNA protecting protein DprA Smed_0934 1012549 - 1011938 - | putative glycerol-3-phosphate acyltransferase PlsY Smed_0935 1013871 - 1012579 - | dihydroorotase pyrB 1014809 - 1013868 - | aspartate carbamoyltransferase catalytic subunit TERM 841 1014916 - 1014899 - H 76 -4.8 -4.86731 | gap 1, opp_overlap 1014900, overlap 1014894 CTCTTCCAAAGAAAA CCGGGCG GCAAG CGCC-GG TCTCCCGTTTGGAAG Smed_0937 1014994 - 1016646 + | acyl-CoA dehydrogenase domain-containing protein Smed_0938 1017563 - 1016628 - | auxin efflux carrier TERM 842 1017121 - 1017090 - G 100 -14.4 -5.61881 | CTTCAAAAAGAAAAA CCCGATTCCGCGGC CGGC GCCGCCGAACCAGG TCAGAACAGCAATAT TERM 843 1017778 - 1017793 + G 81 -4 -5.0133 | GAGAACTGCCTTGTT GATCAT CATG GTGATC TTTTTTGCCGGCCTG Smed_0939 1017734 - 1017916 + | hypothetical protein Smed_0941 1018679 - 1018182 - | Holliday junction resolvase YqgF Smed_0940 1017913 - 1018248 + | hypothetical protein TERM 844 1018264 - 1018290 + gF 91 -9.5 -4.56597 | opp_overlap 1018258, overlap 1018269 AGAATGAAGGATGCG GCG-GCCGAGTCG ATG CGA-TCGGCTCGC TTTTTCCGGGAGACG TERM 845 1018269 - 1018289 + gF 76 -11.9 -3.33744 | opp_overlap 1018258, overlap 1018264 GAAGGATGCGGCGGC CGAGTCGAT GCG ATCGGCTCG CTTTTTCCGGGAGAC TERM 846 1019305 - 1019291 - g 70 -10 -3.58343 | opp_overlap 1019303, overlap 1019275 TGCACGAGCCGGAAA TCGGCA TCG TGCCGA TCGGCGACCGTTTCA Smed_0942 1018798 - 1019502 + | metal-dependent hydrolase Smed_0943 1019598 - 1019885 + | glutamyl-tRNA(Gln) amidotransferase, C subunit gatA 1019935 - 1021416 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 847 1021473 - 1021505 + T 100 -20.8 -3.05596 | CGGCCAGCCCTGGTC TGGGATACCGGAGA CGAGA TCTCCGGTATCCCA TTGGATCGCCGGCTC Smed_0945 1021764 - 1021519 - | hypothetical protein TERM 848 1021583 - 1021595 + g 100 -9.1 -4.99134 | GGCTTACCGGCGGAC GAGCG GAT CGCTC TTTTTCGTTTCAGCT TERM 849 1023498 - 1023478 - g 76 -8.9 -4.12188 | opp_overlap 1023466, overlap 1023479 CGACCAGGTGGAAAA GGCGAAGGC GAA GCCCTCGCT TGCCGGCTGGTTTGT gatB 1022099 - 1023601 + | aspartyl/glutamyl-tRNA amidotransferase subunit B Smed_0947 1023598 - 1024101 + | GCN5-related N-acetyltransferase Smed_0948 1024254 - 1024649 + | NADH dehydrogenase Smed_0949 1024832 - 1025284 + | hypothetical protein aat 1026360 - 1025746 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 850 1026100 - 1026120 + g 71 -12.5 -3.09933 | GGTCGTCGGCCTGTC CGGTGCGCG CTG CGCGCACCC TTCGATGACTTCGGA Smed_0952 1027713 - 1026370 - | acetyl-CoA carboxylase biotin carboxylase subunit Smed_0953 1028202 - 1027726 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit Smed_0954 1028672 - 1028226 - | 3-dehydroquinate dehydratase Smed_0955 1029596 - 1028829 - | DSBA oxidoreductase TERM 851 1030500 - 1030476 - R 86 -15.7 -2.79183 | TCGACGGGGAGGAGA CGACGGCGACT CGA AGTCGCCGGCG ACGCGATCGTGATCA TERM 852 1030577 - 1030592 + r 77 -11.8 -3.6106 | GATGGTTCTGCCCGA GGCGCG GGTG CGCGCC TTTGAACGTATTGCG TERM 853 1031246 - 1031266 + r 73 -3.2 -4.72486 | gap 1, opp_overlap 1031243 1031245 1031244, overlap 1031247 1031263 TCTCAGAAGAAACCG CGGC-GCTG CCAC CAGCCGCCC TTTTTGGGCTTTGTC Smed_0957 1034067 - 1031233 - | ribonuclease TERM 854 1034374 - 1034357 - g 71 -9.1 -3.7614 | opp_overlap 1034357 1034356, overlap 1034358 AATCACCATCAAGAA CTCCGGC CACC GCCGGAA ATTTGCGAACCAGTA Smed_0958 1034324 - 1034638 + | hypothetical protein TERM 855 1034980 - 1035004 + G 72 -7.2 -4.1899 | gap 1, overlap 1034972 1034971 CCGCACGCGGCTGGT GATCGAGTTCG ATCG CGAAC-CGGTC TTTTCGGTCCACTAC TERM 856 1035491 - 1035523 + G 86 -8.3 -4.57304 | opp_overlap 1035497, overlap 1035492 AATCGAGAGCCTGGC ATCGAAGCGTTCCTG ACG CGGGAACGCGACGAG TTTCTTTCCTTGCCT TERM 857 1035492 - 1035522 + G 72 -11.8 -3.33298 | opp_overlap 1035497, overlap 1035491 ATCGAGAGCCTGGCA TCGAAGCGTTCCTG ACG CGGGAACGCGACGA GTTTCTTTCCTTGCC TERM 858 1035870 - 1035853 - g 71 -9.1 -3.73534 | opp_overlap 1035852 1035853 CAAGCTGATCAACAA CCCGCAC CGCC ATGCGGG ATTTCGGGTCCTGCA Smed_0959 1034795 - 1036045 + | N-acetylmuramoyl-L-alanine amidase TERM 859 1036542 - 1036553 + G 70 -7.2 -4.03234 | overlap 1036532 TGCTTGGCGCTGCCG CGGC CGTC GCCG TTTATCTCGGCGCCG TERM 860 1036981 - 1036991 + G 74 -5.4 -4.64676 | GATTCTCGAACTTTA TCTC AAC GAGA TTTTCTTCGGCCTCA TERM 861 1037259 - 1037225 - g 73 -6.8 -4.28254 | opp_overlap 1037240, overlap 1037218 1037227 GGCGAAGAGGCAAAA CAGCAGCCGCTCGGCG TCT CGCCCCGCCGCGGCGG TGCACACCTTTTTGC TERM 862 1037474 - 1037463 - g 72 -4.4 -4.56775 | ACGGTCCTGTAAAAA CGAT CGAG ATCG GCGGCGACTGGGGAG Smed_0960 1036481 - 1038934 + | 1A family penicillin-binding protein TERM 863 1039006 - 1039043 + F 79 -12.7 -3.34398 | opp_overlap 1039005 1039007 1039008 1039010, overlap 1039005 1039007 TCTGCACGAACCAAC ATGATGCCCGTCGCC TTTACATC GGCGGCGGGCATCGC TATTTGACCGACACG TERM 864 1039007 - 1039042 + F 84 -16.2 -2.60496 | opp_overlap 1039005 1039007 1039008 1039010, overlap 1039006 1039005 CTGCACGAACCAACA TGATGCCCGTCGCC TTTACATC GGCGGCGGGCATCG CTATTTGACCGACAC TERM 865 1039042 - 1039007 - f 75 -11.8 -3.27029 | opp_overlap 1039007 1039006 1039005, overlap 1039005 1039008 1039010 CTGCACGAACCAACA TGATGCCCGTCGCC TTTACATC GGCGGCGGGCATCG CTATTTGACCGACAC TERM 866 1039041 - 1039008 - f 81 -15.3 -2.55896 | opp_overlap 1039007 1039006 1039005, overlap 1039007 1039005 1039010 TGCACGAACCAACAT GATGCCCGTCGCC TTTACATC GGCGGCGGGCATC GCTATTTGACCGACA TERM 867 1039039 - 1039010 - f 70 -12.1 -2.81413 | opp_overlap 1039007 1039006 1039005, overlap 1039008 1039007 1039005 CACGAACCAACATGA TGCCCGTCGCC TTTACATC GGCGGCGGGCA TCGCTATTTGACCGA TERM 868 1039142 - 1039126 - f 71 -10.1 -3.56704 | opp_overlap 1039136 1039137, overlap 1039122 1039137 CGTCGACGAAATCAA GCAGGCC ATA AGCCTGC TGAGGAGGCATCTTT TERM 869 1039964 - 1039931 - g 81 -11.7 -3.87104 | gap 1, opp_overlap 1039931 1039930 CTCACAGCATAAGAA CCGCGC-CAAGGCATG GGA CATGCTCCGTGCGCGG CTTTACGAGGCCGAA Smed_0961 1039191 - 1040219 + | peptide chain release factor 2 TERM 870 1040259 - 1040241 - T 95 -17.4 -3.57462 | opp_overlap 1040241 TATCCGACGCGCAAA CGCGGCGC CGT GCGCCGCG TTTGCGTTGGAAATG TERM 871 1040241 - 1040259 + T 100 -17.4 -3.75629 | opp_overlap 1040241 TATCCGACGCGCAAA CGCGGCGC CGT GCGCCGCG TTTGCGTTGGAAATG Smed_0962 1040832 - 1040332 - | hypothetical protein ppnK 1041692 - 1040919 - | inorganic polyphosphate/ATP-NAD kinase Smed_0964 1042293 - 1042661 + | hypothetical protein Smed_0965 1043807 - 1042863 - | LysR family transcriptional regulator Smed_0966 1044014 - 1044634 + | NAD(P)H dehydrogenase (quinone) TERM 872 1044762 - 1044799 + F 100 -26.5 -4.28774 | TTGTGCCGTTCGTTG CGGAGGATGCCGGCTGA GCAA TCAGCCGGCATTCTCCG TTTTGGGTTGGATCG Smed_0967 1044836 - 1045120 + | hypothetical protein Smed_0968 1045985 - 1045110 - | RNA methyltransferase TERM 873 1046611 - 1046599 - H 77 -10.5 -3.8709 | opp_overlap 1046608 1046609 AAACGGCTCGACAAA CCGGC CCC GCCGG CTGATCCATCCGATT TERM 874 1047391 - 1047371 - g 71 -8.3 -3.87149 | GTGAGGAAATCGAAA TCGTCGG CATCCGT CCGACGA CGAAGACGACCTGCA TERM 875 1047780 - 1047753 - g 86 -7.7 -4.67982 | gap 1, overlap 1047748 CGCGATGGAAGAAAA GCTGCGCTTCGC TATCC GCGAAG-GCGGC CGTACCGTCGGCGCA Smed_0969 1046647 - 1047822 + | elongation factor Tu TERM 876 1047843 - 1047874 + F 89 -17.4 -2.71712 | opp_overlap 1047849, overlap 1047849 GGTCCAACCGGACGT TGAAAACCCCGCGG GCAA CCGCGGGGTTTTTG CTTTCAAGGCCGGAG TERM 877 1047868 - 1047849 - f 100 -16.4 -4.11394 | opp_overlap 1047849 1047843 ACCGGACGTTGAAAA CCCCGCGG GCAA CCGCGGGG TTTTTGCTTTCAAGG TERM 878 1047849 - 1047868 + F 100 -16.4 -4.98531 | opp_overlap 1047849, overlap 1047843 ACCGGACGTTGAAAA CCCCGCGG GCAA CCGCGGGG TTTTTGCTTTCAAGG Smed_0970 1048100 - 1048765 + | hypothetical protein Smed_0971 1048866 - 1049759 + | NAD-dependent epimerase/dehydratase TERM 879 1049776 - 1049806 + F 75 -4 -4.85618 | GCGTCACAGCCGCCG TTTCGGCGTC CAATGCCGGGT GCCGCCGAAA TTTTGTTGATTGTTT TERM 880 1050044 - 1050058 + F 80 -9.2 -4.2074 | GGGCTGCGTGGGGGA GGCGGC AAG GCCGTC TTTGTATATTCGCAA secE 1050192 - 1050392 + | preprotein translocase subunit SecE TERM 881 1050504 - 1050483 - g 73 -3.6 -4.67982 | overlap 1050484 GTCGATCGAAGAAAA GGCCAGGC AGAAGG GCCTGACG CACCTCTTCGAAAAA nusG 1050409 - 1050939 + | transcription antitermination protein NusG rplK 1051156 - 1051584 + | 50S ribosomal protein L11 TERM 882 1051795 - 1051817 + G 78 -6.8 -4.59773 | overlap 1051788 CCTTCCGAACGGCAC CGGCCGCTCG GTC CGTGTCGCCG TTTTTGCCCGTGGCG rplA 1051589 - 1052287 + | 50S ribosomal protein L1 TERM 883 1052321 - 1052344 + F 81 -13.2 -3.57561 | CGGTCCTTAACGTGA TTTCCGGCCT TTCG GGGCCGGAAA TTTCCGGGCTTCCCG TERM 884 1052346 - 1052366 + F 79 -12.6 -3.26319 | opp_overlap 1052345 1052346, overlap 1052357 TTCGGGGCCGGAAAT TTCCGGGC TTCCC GCCCGGAA TTCCTGTCCGAGATT TERM 885 1052366 - 1052346 - f 73 -12.6 -2.71712 | opp_overlap 1052346 1052357, overlap 1052345 TTCGGGGCCGGAAAT TTCCGGGC TTCCC GCCCGGAA TTCCTGTCCGAGATT TERM 886 1052357 - 1052389 + F 72 -6.2 -4.30014 | opp_overlap 1052346 1052345, overlap 1052346 1052385 AAATTTCCGGGCTTC CCGCCCGGAATTCC TGTCC GAGATTGCGGGTGG TTTTACCTTAATCAC TERM 887 1052608 - 1052576 - g 76 -9.8 -3.89215 | overlap 1052571 1052577 GGTGACAAAGGCAAA CCCGGCAGGGCTGC GATGA GCAACCCTGCCAAC TGGAGACAGACAGTG TERM 888 1052607 - 1052577 - g 70 -13.3 -2.93047 | overlap 1052571 1052576 GTGACAAAGGCAAAC CCGGCAGGGCTGC GATGA GCAACCCTGCCAA CTGGAGACAGACAGT TERM 889 1052653 - 1052639 - g 73 -3.5 -4.6856 | GAAAGAGCGGAAAAA CGCGA ATTCG TCACG GAGCTGAACGAAGTC rplJ 1052552 - 1053139 + | 50S ribosomal protein L10 rplL 1053198 - 1053575 + | 50S ribosomal protein L7/L12 TERM 890 1053584 - 1053626 + F 78 -6.1 -4.59511 | opp_overlap 1053586 1053596, overlap 1053592 CAAGTAATTCGACGA CATGCGAAGGGAGGGGGCC TTTAT GGCCGCCTCTCTTTGACCG TTTTTAGAACATATT TERM 891 1053592 - 1053618 + F 78 -11.5 -3.68853 | opp_overlap 1053586 1053596, overlap 1053584 TCGACGACATGCGAA GGGAGGGGGCC TTTAT GGCCGCCTCTC TTTGACCGTTTTTAG TERM 892 1053679 - 1053636 - f 71 -11.2 -3.29144 | gap 1, opp_overlap 1053636 1053640 1053654, overlap 1053638 1053640 TGACCGTTTTTAGAA CATATTACCCAAAAGCCTGTC GAA AAC-GGCTTTTGGGTAATGGG TTCTTCAAGAGGATG TERM 893 1053636 - 1053679 + F 81 -12.7 -3.61715 | gap 1, opp_overlap 1053636 1053638 1053640, overlap 1053640 1053654 TGACCGTTTTTAGAA CATATTACCCAAAAGCCTGT CGAAA AC-GGCTTTTGGGTAATGGG TTCTTCAAGAGGATG TERM 894 1053677 - 1053638 - f 75 -12.4 -3.21395 | gap 1, opp_overlap 1053636 1053640 1053654, overlap 1053636 1053640 ACCGTTTTTAGAACA TATTACCCAAAAGCCTGTC GAA AAC-GGCTTTTGGGTAATG GGTTCTTCAAGAGGA TERM 895 1053640 - 1053675 + F 78 -14.3 -2.6563 | gap 1, opp_overlap 1053638 1053636 1053640, overlap 1053636 1053654 CGTTTTTAGAACATA TTACCCAAAAGCCTGT CGAAA AC-GGCTTTTGGGTAA TGGGTTCTTCAAGAG TERM 896 1053675 - 1053640 - f 85 -15 -3.17146 | gap 1, opp_overlap 1053640 1053636 1053654, overlap 1053638 1053636 CGTTTTTAGAACATA TTACCCAAAAGCCTGTC GAA AAC-GGCTTTTGGGTAA TGGGTTCTTCAAGAG rpoB 1053840 - 1057982 + | DNA-directed RNA polymerase subunit beta TERM 897 1057991 - 1058019 + F 100 -18.1 -3.55444 | opp_overlap 1057989 1057987 1057985 1057983 1057992, overlap 1057992 CGAATAAGAGACATG AGGTGCGTGCCGC TCA GCGGCGCGCACCG TTTCCGCCGTCGGGC TERM 898 1057992 - 1058018 + F 100 -21.6 -2.73124 | opp_overlap 1057992 1057989 1057987 1057985 1057983, overlap 1057991 GAATAAGAGACATGA GGTGCGTGCCGC TCA GCGGCGCGCACC GTTTCCGCCGTCGGG TERM 899 1058018 - 1057992 - f 100 -19.4 -2.78504 | opp_overlap 1057991 1057992, overlap 1057989 1057987 1057985 1057983 GAATAAGAGACATGA GGTGCGTGCCGC TCA GCGGCGCGCACC GTTTCCGCCGTCGGG TERM 900 1058063 - 1058077 + F 74 -7.1 -4.34811 | opp_overlap 1058057 CGGCAGGAACAGGGG CCGCA CCCGA TGCGG TTTTAGCTGTTTATT TERM 901 1058649 - 1058639 - g 71 -5.4 -4.4078 | GTCGCTCAAGGAAAA TCAG CTC CTGA GCGAAGAAGAATACA TERM 902 1059433 - 1059386 - g 72 -4 -4.67038 | gap 1, opp_overlap 1059387, overlap 1059387 GGTCGAAAAGGAAAA GCCGGAAG-TCTGGGATATCCTC GAC GAGGTCATCCGCGAGCATCCGGT CCTTCTGAACCGCGC TERM 903 1060062 - 1060074 + G 74 -9.1 -3.90112 | GGCTTCTCGCATGCC TGCCG TGC CGGCA TTTCGTTCGGCAAGG Smed_0979 1058166 - 1062371 + | DNA-directed RNA polymerase subunit beta' TERM 904 1062413 - 1062440 + T 100 -17 -4.386 | opp_overlap 1062415, overlap 1062415 CCCGGTGAAACGATA AAGCCGCCCGGA GCGA TCCGGGCGGCTA TTTTCTGAGCACTTC TERM 905 1062415 - 1062438 + T 100 -19.6 -3.79687 | opp_overlap 1062415, overlap 1062413 CGGTGAAACGATAAA GCCGCCCGGA GCGA TCCGGGCGGC TATTTTCTGAGCACT TERM 906 1062438 - 1062415 - T 100 -19.6 -4.13654 | opp_overlap 1062415 1062413 CGGTGAAACGATAAA GCCGCCCGGA GCGA TCCGGGCGGC TATTTTCTGAGCACT Smed_0980 1062768 - 1062472 - | hypothetical protein rpsL 1063468 - 1063839 + | 30S ribosomal protein S12 Smed_0982 1063897 - 1064367 + | 30S ribosomal protein S7 TERM 907 1065926 - 1065906 - g 73 -6.7 -4.34488 | overlap 1065908 TACACGCACAAGAAA CAGTCCGGT GGT ACCGGCCAG TTCGCACGCGTCAAG TERM 908 1066517 - 1066468 - g 93 -16.8 -3.72695 | gap 2 ACGTCGCGCAGGAAA TCCAG-GCGAAG-TATTCCGGTCA GAAG TGACCGGAATAGCCTCGCGCTGAA ACAGAATGAAAAGAT Smed_0983 1064397 - 1066496 + | elongation factor G TERM 909 1067312 - 1067292 - g 71 -8.3 -3.87149 | GTGAGGAAATCGAAA TCGTCGG CATCCGT CCGACGA CGAAGACGACCTGCA TERM 910 1067701 - 1067674 - g 86 -7.7 -4.67982 | gap 1, overlap 1067669 CGCGATGGAAGAAAA GCTGCGCTTCGC TATCC GCGAAG-GCGGC CGTACCGTCGGCGCA Smed_0984 1066568 - 1067743 + | elongation factor Tu TERM 911 1067763 - 1067752 - f 87 -7.2 -4.92757 | opp_overlap 1067752 CGAGTAATAAGAAAA CGGC TTGA GCCG TTTCGGCAGGGACAT TERM 912 1067766 - 1067798 + F 100 -17.2 -4.56597 | gap 1, overlap 1067769 ACGGCTTGAGCCGTT TCGGCAGGGACATGG TCGG CCATGTCCCTG-CGA TTTTTGAAAAGAAGC TERM 913 1067769 - 1067796 + F 100 -20 -2.60032 | overlap 1067766 GCTTGAGCCGTTTCG GCAGGGACATGG TCGG CCATGTCCCTGC GATTTTTGAAAAGAA TERM 914 1068188 - 1068151 - g 86 -16.3 -3.14683 | AGACGCGCTGATGAA GCTCGACCTCGCCGCCG GCGT CGACGTCGAGATCAAGC TGTAAGACCCGGCGC rpsJ 1067885 - 1068193 + | 30S ribosomal protein S10 TERM 915 1068987 - 1068942 - g 80 -14.7 -3.16564 | gap 1 CCGTGACGCCATCAA GTCGGGTACTCCGG-AAGGCGC ACC GCGCCCTGCCGCAGTACGCGCC GCAGAATCCAAGTAA rplC 1068316 - 1069002 + | 50S ribosomal protein L3 TERM 916 1069244 - 1069209 - g 76 -12.6 -3.42503 | gap 1, overlap 1069215 CGCCAAGATGTACAA GCAGAAGGGTA-CGGGC CGC GCCCGCCACCATTCCGC TCGTGCTCCGCAGTT TERM 917 1069495 - 1069461 - g 80 -14.5 -3.14132 | GCTCGGCCTCACCAA TGCCCT-GATCATCGGC GGA GCCGA-GATCGAGGGCA ACTTCAAGCTCGCCG rplD 1069015 - 1069635 + | 50S ribosomal protein L4 TERM 918 1069889 - 1069871 - g 70 -10.2 -3.66732 | opp_overlap 1069886 GAAGGACGTGAAGAA GGCGATCG TTA CGCTCGCC GACGGTCAGTCCATC rplW 1069632 - 1069925 + | 50S ribosomal protein L23 rplB 1069970 - 1070806 + | 50S ribosomal protein L2 rpsS 1070822 - 1071100 + | 30S ribosomal protein S19 TERM 919 1071130 - 1071118 - g 73 -6.9 -4.27584 | ATGGGCAAGGCAAAA GCCGA ACG CCGGC TGAAGGATAATGAAG TERM 920 1071229 - 1071186 - g 72 -11.7 -3.30124 | opp_overlap 1071228 CGTCAGCCCCCAGAA GCTCAACCTCGTTGCCGCG CTGATC CGCGGCAAGAAGGTGGATC GGGCTCTGGCCGAAC rplV 1071103 - 1071492 + | 50S ribosomal protein L22 rpsC 1071492 - 1072205 + | 30S ribosomal protein S3 rplP 1072244 - 1072657 + | 50S ribosomal protein L16 Smed_0994 1072670 - 1072870 + | 50S ribosomal protein L29 rpsQ 1072884 - 1073120 + | 30S ribosomal protein S17 TERM 921 1073222 - 1073189 - f 75 -9.5 -3.94404 | opp_overlap 1073195, overlap 1073198 AAGCACGCAATTAAA GCCGAGGAACGCTCG AGTT CGAGCGTTCTTTTGC TTTGAGATGAGCACA TERM 922 1073195 - 1073216 + F 100 -14.5 -4.55798 | opp_overlap 1073189 1073198 GCAATTAAAGCCGAG GAACGCTCG AGTT CGAGCGTTC TTTTGCTTTGAGATG TERM 923 1073354 - 1073319 - g 71 -4.7 -4.48299 | gap 2, opp_overlap 1073322, overlap 1073320 TCAGATGCAAACAAA CCTCGACGTG-G-CGGA TAAT TCCGGCGCACGTCGTGT CATGTGCATCAAGGT TERM 924 1073509 - 1073475 - g 73 -12.8 -3.16564 | overlap 1073502 1073504 GGGTGATGTCATGAA GGCTGTTGTCGTTCGC ACC GCGAAGGACATCCGCC GTGCAGATGGCAGCG rplN 1073299 - 1073667 + | 50S ribosomal protein L14 rplX 1073682 - 1073993 + | 50S ribosomal protein L24 TERM 925 1074189 - 1074150 - g 86 -8.5 -4.62069 | opp_overlap 1074168 CGGCGATTCCAAAAA GCCGACCGTCGCAGC TGCCGACCTC GCTGCGATTGCCGGC CAGAAGCCGGTAATC rplE 1073986 - 1074543 + | 50S ribosomal protein L5 rpsN 1074578 - 1074883 + | 30S ribosomal protein S14 rpsH 1074896 - 1075294 + | 30S ribosomal protein S8 rplF 1075335 - 1075868 + | 50S ribosomal protein L6 rplR 1075881 - 1076243 + | 50S ribosomal protein L18 TERM 926 1076298 - 1076328 + F 75 -10.4 -3.78022 | CTTCGCACATCCCCG GCCGCTTCGATTTC CAA GGAAGTGAGGCGGC TTTCGTCAATCTGCC TERM 927 1076421 - 1076393 - g 91 -11.7 -4.27512 | overlap 1076395 1076409 1076418 1076419 TGGCACAAGAAAGAA GAGGTTCTCGCGA AGA TCGCCAGAACCGC GAAGAGCGCGACAGC TERM 928 1076419 - 1076395 - g 81 -12.9 -3.73122 | overlap 1076393 1076409 1076418 GCACAAGAAAGAAGA GGTTCTCGCGA AGA TCGCCAGAACC GCGAAGAGCGCGACA rpsE 1076377 - 1076946 + | 30S ribosomal protein S5 rpmD 1076959 - 1077162 + | 50S ribosomal protein L30 TERM 929 1077379 - 1077391 + G 71 -5.5 -4.3767 | opp_overlap 1077379, overlap 1077356 CGGCTTCAACAACAT CTTCG CTT CGGAG TTTGTTGTCGTGTCG rplO 1077176 - 1077646 + | 50S ribosomal protein L15 TERM 930 1077700 - 1077648 - f 80 -9.7 -4.1552 | opp_overlap 1077661, overlap 1077661 CAGCCGCGGAATAAA TATGACTGATGAACCGCCCGGGGTG CTT CACGCCGGGCGGTTTTGCTCCCATA TGTGAGCCTCACGTC TERM 931 1077687 - 1077661 - f 100 -19.4 -3.20207 | opp_overlap 1077661, overlap 1077648 AATATGACTGATGAA CCGCCCGGGGTG CTT CACGCCGGGCGG TTTTGCTCCCATATG TERM 932 1077661 - 1077687 + F 100 -19.4 -4.27617 | opp_overlap 1077661 1077648 AATATGACTGATGAA CCGCCCGGGGTG CTT CACGCCGGGCGG TTTTGCTCCCATATG TERM 933 1079073 - 1079100 + G 72 -4 -4.59414 | overlap 1079066 1079069 1079077 ATCTCGCAGACCGGC GTGCCGTTCTAC CTTG GTGGTACGTCGC TTTTGATTGTTGTCA secY 1077882 - 1079222 + | preprotein translocase subunit SecY adk 1079219 - 1079797 + | adenylate kinase TERM 934 1079887 - 1079929 + F 79 -7 -4.65838 | gap 1, opp_overlap 1079860 1079915, overlap 1079928 TCGCGACATGAGAAG CGATCG-GCGCGGTCTTCA AAGAAA TGAAGTCCGGGTACGGTCG TTTTTGACGTGTCTC rpsM 1080029 - 1080397 + | 30S ribosomal protein S13 TERM 935 1080444 - 1080417 - f 73 -12.6 -2.85366 | opp_overlap 1080418, overlap 1080416 1080409 CCGAAAAGGGGAAAT GGGAGGCTGGCG CACG CGCCGGCCTCCT TTTTGCAGTTTGGGA TERM 936 1080418 - 1080443 + F 100 -18.3 -4.70879 | opp_overlap 1080417 1080416 1080409 CGAAAAGGGGAAATG GGAGGCTGGCG CACG CGCCGGCCTCC TTTTTGCAGTTTGGG Smed_1009 1080630 - 1081019 + | 30S ribosomal protein S11 TERM 937 1081038 - 1081066 + F 73 -11.8 -3.03243 | gap 1, opp_overlap 1081036, overlap 1081049 TCTGTATTCAACATT CCGGTGAGGACGT CGCG ATGTCCTC-CCGG TCTTCGGGGCTCGGT TERM 938 1081244 - 1081264 + G 71 -4.7 -4.4767 | gap 1, overlap 1081239 1081248 TTGGTCTGACGCTCG GCAACGCG CTTCGT CGCGT-GC TTTTGTCGTCGCTGC TERM 939 1081409 - 1081388 - g 78 -10.2 -4.00469 | TCAACATCAAGGAAA TCGCCATC AAGATG GATGGCGA CGACGCGAAGCGCAT Smed_1010 1081123 - 1082133 + | DNA-directed RNA polymerase subunit alpha rplQ 1082180 - 1082605 + | 50S ribosomal protein L17 TERM 940 1082630 - 1082667 + T 100 -23.7 -2.87756 | opp_overlap 1082630 1082635, overlap 1082635 AGATATCGAGAAGAG TAAAAGCGGCCGGATGA TTGA TCATCCGGCCGCTTTTG TCATTGGTTCGTTAT TERM 941 1082667 - 1082630 - T 100 -21.5 -2.5598 | opp_overlap 1082630 1082635, overlap 1082635 AGATATCGAGAAGAG TAAAAGCGGCCGGATGA TTGA TCATCCGGCCGCTTTTG TCATTGGTTCGTTAT TERM 942 1082662 - 1082635 - T 100 -21.4 -4.46656 | opp_overlap 1082630 1082635, overlap 1082630 TCGAGAAGAGTAAAA GCGGCCGGATGA TTGA TCATCCGGCCGC TTTTGTCATTGGTTC TERM 943 1082635 - 1082662 + T 100 -21.4 -4.58213 | opp_overlap 1082635 1082630, overlap 1082630 TCGAGAAGAGTAAAA GCGGCCGGATGA TTGA TCATCCGGCCGC TTTTGTCATTGGTTC Smed_1012 1083321 - 1082668 - | putative sulfite oxidase subunit YedZ Smed_1013 1084265 - 1083324 - | putative sulfite oxidase subunit YedY TERM 944 1084540 - 1084551 + H 86 -5.8 -5.14563 | GCTGAATTGTCGGGC GGCA GGTT TGCC TTTTTTCGTACGAAA Smed_1014 1084606 - 1086003 + | protease Do TERM 945 1086472 - 1086483 + G 72 -7.2 -4.19238 | overlap 1086457 ACGCCGCGCTTCTGT CGCG CGCG CGCG TTTTGACGTTCAAAC TERM 946 1086588 - 1086558 - g 72 -7.5 -4.18018 | gap 1, overlap 1086534 1086559 GCGGCCGAGGGAAAA TCGCTCCCGC-TCG ACGG CGACGCGCGGGCGA GCCTGATCCGCATGG TERM 947 1087061 - 1087043 - g 74 -13.1 -3.30771 | TTATACCGCCTACAA GGCGGCG ATGCG CGCCGCC AGGGAAAACGGCTCT Smed_1015 1086000 - 1087310 + | recombination factor protein RarA Smed_1016 1087470 - 1087784 + | small multidrug resistance protein Smed_1017 1088701 - 1087916 - | ATP12 ATPase TERM 948 1088195 - 1088177 - G 74 -12.4 -3.53224 | opp_overlap 1088176 1088169 1088173 CAGGCCGCCGGCAAA GGCCGAGA TCG CCTCGGCC GGTTGTTCCTGATGG TERM 949 1088261 - 1088234 - G 76 -7.6 -4.35483 | gap 1 TTCGACGAGAATAAA CCGGGC-GCCGAG TGT CCGGGCGGCCCAG TCGAGAACCGGATTC Smed_1018 1089359 - 1088694 - | HAD family hydrolase Smed_1019 1090351 - 1089359 - | RluA family pseudouridine synthase Smed_1020 1090776 - 1090390 - | CrcB protein Smed_1021 1091611 - 1090778 - | S-formylglutathione hydrolase Smed_1022 1092287 - 1091628 - | hypothetical protein Smed_1023 1092750 - 1092310 - | hypothetical protein TERM 950 1092803 - 1092778 - R 100 -14.1 -4.64766 | gap 1, opp_overlap 1092778 TCGAGAGGCGAAAAA GCGCCGGA-ATC AAT GATCTCCGGCGC TTTCCTGATTCACGT TERM 951 1092778 - 1092803 + r 100 -14.1 -3.84514 | gap 1, opp_overlap 1092778 TCGAGAGGCGAAAAA GCGCCGGA-ATC AAT GATCTCCGGCGC TTTCCTGATTCACGT Smed_1024 1093953 - 1092826 - | S-(hydroxymethyl)glutathione dehydrogenase Smed_1025 1094430 - 1094038 - | helix-turn-helix domain-containing protein lipB 1095427 - 1094639 - | lipoyltransferase TERM 952 1095678 - 1095719 + H 87 -9.5 -4.58685 | opp_overlap 1095685 1095686, overlap 1095686 CCGCACCATCTAAGA TGAAGAAGCCCCCGCAACC AAAT GGTTTCGCGGGTTTTTTTA TTTTTAACCCCCTTT TERM 953 1095686 - 1095711 + H 100 -8.9 -6.20267 | opp_overlap 1095686 1095685, overlap 1095678 TCTAAGATGAAGAAG CCCCCGCAACC AAAT GGTTTCGCGGG TTTTTTTATTTTTAA Smed_1027 1096247 - 1098196 + | putative serine protein kinase, PrkA Smed_1028 1098221 - 1099537 + | hypothetical protein TERM 954 1099891 - 1099867 - g 71 -11.4 -3.4252 | TCTGATGGAGGAGAA CACCATGGCC ATGCA GGCCCTGGTG ACCGCACATGCCGCC Smed_1029 1099550 - 1101091 + | hypothetical protein TERM 955 1101199 - 1101153 - T 88 -16.3 -3.09933 | gap 2, overlap 1101188 1101191 TCTTAACCTATGGAA TCGATCACGATGATTCTAGGTCG ATC CAACCTA-AA-CATCGTGATCGA GGATCGCGTCGCATC Smed_1030 1101649 - 1101296 - | hypothetical protein Smed_1031 1101975 - 1101709 - | hypothetical protein Smed_1032 1102641 - 1102150 - | peptide deformylase TERM 956 1102329 - 1102312 - G 70 -10.5 -3.54424 | CTCCAGCGTTTGAAA GCGCACG CGCA CGCGCGC CGGCCGCTCCACCTC Smed_1033 1102861 - 1104282 + | magnesium transporter Smed_1034 1104457 - 1104843 + | MerR family transcriptional regulator Smed_1035 1105986 - 1104889 - | hypothetical protein Smed_1036 1106728 - 1106039 - | hypothetical protein TERM 957 1107116 - 1107141 + H 100 -11.9 -5.47218 | overlap 1107117 GAAAGCAATGTCATG GCGATGCAGTC TGCG GACTGCATCGG TTTTTTTGACTGCCC TERM 958 1107117 - 1107140 + H 100 -15.4 -3.87608 | overlap 1107116 AAAGCAATGTCATGG CGATGCAGTC TGCG GACTGCATCG GTTTTTTTGACTGCC Smed_1037 1107368 - 1108768 + | L-serine dehydratase 1 TERM 959 1109132 - 1109159 + G 84 -13.4 -3.8211 | GTCGAGACGTTCACT GATGGCGGCGGC ATCG GCCGCTGCAATC TTATTCTAGGTCCGG Smed_1038 1108895 - 1109332 + | hypothetical protein Smed_1039 1109660 - 1109391 - | hypothetical protein TERM 960 1109826 - 1109847 + r 74 -6.6 -4.46854 | gap 1, overlap 1109842 GGGTCCCTTACTGCT GGCTT-GCC CAGCA GGCGAAGCC TTTCTTCTTCAATGC Smed_1040 1111302 - 1109818 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 961 1110954 - 1110978 + g 95 -11.4 -4.42806 | CGGCGCGTACCCCGA GCTTCGACGG CGGCT CCGCCGAAGC TTTCTTTGAAAATGG Smed_1041 1112274 - 1111546 - | hypothetical protein Smed_1042 1113083 - 1112475 - | transglutaminase family protein cysteine peptidase BTLCP Smed_1043 1114186 - 1113578 - | type IV pilus assembly PilZ Smed_1044 1114879 - 1114277 - | hypothetical protein TERM 962 1115087 - 1115111 + H 88 -11.4 -4.18018 | overlap 1115102 1115103 TCGACTGACGCGTCG CGGAACGGCG CGCGA CGCCGTTCAG TTTTCGCTGGACGGC TERM 963 1115102 - 1115127 + H 91 -7.5 -5.23644 | overlap 1115087 1115103 CGGAACGGCGCGCGA CGCCGTTCAGT TTTC GCTGGACGGCC TTTTTCTGTTTGCTT TERM 964 1115103 - 1115126 + H 78 -11 -3.71747 | overlap 1115087 1115102 GGAACGGCGCGCGAC GCCGTTCAGT TTTC GCTGGACGGC CTTTTTCTGTTTGCT Smed_1045 1115326 - 1116057 + | rhomboid family protein TERM 965 1116151 - 1116128 - f 76 -12.4 -3.38272 | overlap 1116142 1116144 GAGCACCATTCATAA CGGCCGCC GAATAAGA GGCGGCCG CGGAAAGGGCCGGGT Smed_1046 1116345 - 1116773 + | signal-transduction protein Smed_1047 1117785 - 1116820 - | patatin TERM 966 1117992 - 1117959 - R 81 -13.1 -3.60525 | overlap 1117961 1117962 GCGATCGAGATATAA CACCGAACCGGTCGC GAAT GCGGCCGGTCCGATA AACATTGGATACAGC TERM 967 1117990 - 1117961 - R 83 -13.5 -3.37912 | overlap 1117959 1117962 GATCGAGATATAACA CCGAACCGGTCGC GAAT GCGGCCGGTCCGA TAAACATTGGATACA TERM 968 1117989 - 1117962 - R 78 -14.8 -2.62265 | overlap 1117961 1117959 ATCGAGATATAACAC CGAACCGGTCGC GAAT GCGGCCGGTCCG ATAAACATTGGATAC hisI 1118586 - 1118131 - | phosphoribosyl-AMP cyclohydrolase folE 1119311 - 1118694 - | GTP cyclohydrolase I Smed_1050 1119649 - 1120095 + | NifU domain-containing protein Smed_1051 1120138 - 1120467 + | hypothetical protein Smed_1052 1120484 - 1120891 + | hypothetical protein Smed_1053 1120897 - 1121436 + | hypothetical protein thrS 1121556 - 1123538 + | threonyl-tRNA synthetase TERM 969 1123553 - 1123601 + T 100 -24 -3.07935 | gap 1, opp_overlap 1123588 1123589, overlap 1123598 ACGCGCTTGCCTCTA CGCCTGCCAGTCCATTCTC-CCG CGTG CGGAGAGAAGGGCCTGGCAGGCG TTCACTCGATCGCCT Smed_1055 1124707 - 1123658 - | hypothetical protein TERM 970 1124979 - 1124965 - g 73 -2.8 -4.72029 | CCGAACTGAAGAAAA TGGC CCTTGCC GCCA AGCCGGACATGCCGG Smed_1056 1124754 - 1125341 + | nitroreductase Smed_1057 1125341 - 1125943 + | hypothetical protein Smed_1058 1126632 - 1125946 - | HpcH/HpaI aldolase Smed_1059 1126705 - 1127838 + | hypothetical protein Smed_1060 1128281 - 1127853 - | hypothetical protein TERM 971 1128833 - 1128800 - g 72 -7.3 -4.14392 | gap 1 GGGGAAGGCGGAAAA GCTTGGCCTCACGGCG ATC CGCCTCGAGACCG-GC ATCTACCAGCCGGAG Smed_1061 1128489 - 1128965 + | GCN5-related N-acetyltransferase Smed_1062 1131147 - 1129087 - | DNA topoisomerase IV subunit B TERM 972 1129935 - 1129945 + g 76 -8.2 -4.16943 | overlap 1129934 AGTGGTCGAAGGGGT CGCG AAG CGCG TTTTCGACTATGCGC TERM 973 1130470 - 1130460 - G 76 -8.2 -4.2349 | overlap 1130461 GGGCCATACGGAAAA GCCG AGC CGGC TCGAAGCGGGCATGC TERM 974 1131056 - 1131075 + g 70 -10.6 -3.64703 | overlap 1131062 CGCGGCGCCTCGTTA CCGGCGGC TGCG GCCGCGGG TTTGCGTGGCGCGGC TERM 975 1131683 - 1131736 + G 71 -5.2 -4.45544 | gap 2, opp_overlap 1131665, overlap 1131697 TCGATCTCGGCGGGC GCAGGCTGGACGTCGC-CCGCG-TCG GCCC CGATCGCGGCGCTGCCTTCACCGTGC TTTTCATTCATGGAC Smed_1063 1131391 - 1132275 + | hypothetical protein Smed_1064 1132307 - 1133632 + | FAD linked oxidase domain-containing protein Smed_1065 1134272 - 1133667 - | YceI family protein Smed_1066 1134895 - 1134269 - | cytochrome B561 TERM 976 1134501 - 1134473 - G 100 -11.7 -4.59773 | overlap 1134474 GGCCAGGGCGAAAAA TGCCTCCGAAGTC TCC GACCTCGGAAGCG GCAGATGCGGAATTA TERM 977 1134500 - 1134474 - G 84 -15.2 -3.35542 | overlap 1134473 GCCAGGGCGAAAAAT GCCTCCGAAGTC TCC GACCTCGGAAGC GGCAGATGCGGAATT Smed_1067 1135120 - 1135890 + | Triose-phosphate isomerase secG 1136013 - 1136483 + | preprotein translocase subunit SecG TERM 978 1136505 - 1136528 + F 100 -18.2 -5.23292 | opp_overlap 1136502 1136501 AAACGAAAAGATCTC CCGGCGGATG GCTT CATCCGCCGG TTTTATTTTGTGTGA TERM 979 1137121 - 1137131 + G 73 -8.2 -4.04206 | opp_overlap 1137089 TAACGACCTGCCGCG CGGC ACC GCCG TTTATGTGCACCTGA Smed_1069 1136627 - 1138255 + | CTP synthetase Smed_1070 1138390 - 1139280 + | hypothetical protein Smed_1071 1139283 - 1140122 + | 2-dehydro-3-deoxyphosphooctonate aldolase Smed_1072 1140235 - 1141509 + | phosphopyruvate hydratase TERM 980 1141545 - 1141520 - f 73 -11.7 -3.03124 | GCTGATCGTTTAACA GGCGGGGGGCG AAAT CGCCCCTCGTC CGCCTCGCAACATCT TERM 981 1141600 - 1141610 + F 71 -8.2 -4.07687 | GCGACGCTTCGGCAT CGGC TCC GCCG TTTTGCCAGCACCGT Smed_1074 1142718 - 1143572 + | hypothetical protein TERM 982 1143658 - 1143620 - f 81 -12.5 -3.59979 | gap 1 TTGTCTGATCCGAAA GTCATCCTCCGGCTCGGA CGGC CCCATGCC-GAGGATGAC GAGTGGAAGAGTGCG TERM 983 1143821 - 1143836 + F 72 -9 -3.85817 | GCCCCGCATCTTCTC TGCGGA GGCT TCCGCA TTTCTCGAGACGCAT Smed_1075 1144025 - 1144345 + | septum formation initiator Smed_1076 1144482 - 1145528 + | dehydrogenase E1 component Smed_1077 1145546 - 1146943 + | pyruvate dehydrogenase subunit beta TERM 984 1147294 - 1147274 - g 74 -10.3 -3.74747 | overlap 1147263 1147264 1147285 CGAAGCCGCAGGAAA CGGCGGAAG CAG CACCCGCCG CGGCAAAGGCGCCCG Smed_1078 1146958 - 1148331 + | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase Smed_1079 1148390 - 1149031 + | GDSL family lipase Smed_1080 1149034 - 1149615 + | GCN5-related N-acetyltransferase Smed_1081 1149634 - 1151079 + | dihydrolipoamide dehydrogenase Smed_1082 1151158 - 1151409 + | transglycosylase-associated protein TERM 985 1151483 - 1151512 + F 100 -15.1 -4.3467 | TTCCATTCGCTTACG GTCAGGCTGCCAT GCAA ATGGTGGCCTGAC TTTTCATGTACGGCT TERM 986 1151661 - 1151650 - g 72 -7.2 -4.11216 | CCGCCACCCGGAAAA GGCC CACC GGCC CGATACCGAAGTCCT Smed_1083 1151591 - 1152562 + | lipoyl synthase TERM 987 1152610 - 1152644 + F 71 -7 -4.15222 | overlap 1152591 GCTCCCTGCAAGAGC GGGGCGTGGGGATTTG CAG CAACGCTCCACACTCC TTTGTTCGACAAGGT Smed_1085 1153262 - 1153711 + | cyclase/dehydrase Smed_1086 1154196 - 1153699 - | CinA domain-containing protein ispDF 1155410 - 1154196 - | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein TERM 988 1155590 - 1155580 - H 75 -5.4 -4.59773 | CCGCATGCCGAAAAA GCTT GGC AAGC GGAAGAACAATGTCT Smed_1088 1155641 - 1156654 + | nifR3 family TIM-barrel protein Smed_1089 1156651 - 1157793 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 989 1158988 - 1158973 - g 71 -4.6 -4.42386 | overlap 1158974 1158975 GTCCGATCGAGAAAA CCGCAG CCCG CTCCGG CTCGCTGTCGATCTC Smed_1090 1157790 - 1159244 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 990 1159251 - 1159265 + F 75 -8.6 -4.08216 | overlap 1159263 AGCGCTTGACTGAGA TGCAAC ACC GTTGCA TTTTCGCCACAATGC Smed_1091 1159461 - 1161734 + | multi-sensor signal transduction histidine kinase Smed_1092 1161724 - 1163088 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 991 1163394 - 1163417 + G 71 -12.5 -3.06261 | ACGAAGTCAACATCG TCGCATGCG AAGTGG CGCATGCGA TCTTCAACGTTCCGA trkA 1163153 - 1164529 + | potassium transporter peripheral membrane component TERM 992 1164945 - 1164927 - g 72 -3.8 -4.57073 | GATCGCCCGCAAAAA CACCGA GGGCATA TCGGCG ATAACCGTGCCGGAG Smed_1094 1164541 - 1165404 + | D-amino acid aminotransferase hfq 1165507 - 1165749 + | RNA-binding protein Hfq TERM 993 1165910 - 1165863 - g 74 -4.6 -4.56597 | gap 1, opp_overlap 1165844, overlap 1165864 1165888 CCCGGTCCTGAAAAA GGCCGGGAGGGTCTCTGCCGACA TAG TGGCG-CAGAGCGCCACGCGGTC GGATCAAAGCCGCCT TERM 994 1165904 - 1165888 - g 74 -13.7 -2.87132 | overlap 1165863 GTCTCTGCCGACATA GTGGCGC AGA GCGCCAC GCGGTCGGATCAAAG Smed_1096 1165756 - 1167153 + | GTP-binding protein HSR1-related mazG 1168087 - 1167251 - | nucleoside triphosphate pyrophosphohydrolase Smed_1098 1168678 - 1168091 - | CMP/dCMP deaminase zinc-binding Smed_1099 1168901 - 1170355 + | uroporphyrin-III C-methyltransferase Smed_1100 1170366 - 1170683 + | hypothetical protein Smed_1101 1170698 - 1172371 + | nitrite/sulfite reductase hemoprotein beta subunit Smed_1102 1172389 - 1172889 + | hypothetical protein TERM 995 1173655 - 1173640 - g 71 -8.2 -3.88291 | GATTATTCTTACAAA GGCCGG ATTA CCGACC TGATGAACAACGGCA Smed_1103 1173034 - 1173846 + | oxidoreductase FAD-binding subunit Smed_1104 1174838 - 1173892 - | transposase TERM 996 1174474 - 1174492 + g 100 -4.4 -5.64274 | overlap 1174476 GTCGGGCCGCTCCCG TTCGCTGG CGA CCAGCGTC TTTTTTTATAACTCA TERM 997 1174476 - 1174490 + g 95 -11.4 -4.46105 | overlap 1174474 CGGGCCGCTCCCGTT CGCTGG CGA CCAGCG TCTTTTTTTATAACT TERM 998 1174912 - 1174893 - R 75 -3.6 -4.83169 | ATTTGCGCAGAAAAA GGAATC CCCTTTCC GATTCC GCCTAAATGCATCCC TERM 999 1174955 - 1175013 + r 100 -34.9 -2.72511 | gap 1, overlap 1174956 TCTCACGCCGATTTG CGGCCGCCCCTCAGCACCTTCTCCCCGT TCTG ACGGGAAGAAGGTGTTGAGGGGCG-CCG CTTTCGAGACGTCAC TERM 1000 1174956 - 1175014 + r 100 -29.1 -3.54424 | gap 1, overlap 1174955 CTCACGCCGATTTGC G-GCCGCCCCTCAGCACCTTCTCCCCGT TCTG ACGGGAAGAAGGTGTTGAGGGGCGCCGC TTTCGAGACGTCACA Smed_1105 1175819 - 1175043 - | ABC transporter related TERM 1001 1175804 - 1175818 + g 77 -4.2 -4.90079 | CCATTTTCGTTGTAG TGGCGG TAT TTGCCA TTTTCTTGTTCCCCT Smed_1106 1176990 - 1175836 - | polar amino acid ABC transporter, inner membrane subunit TERM 1002 1176662 - 1176627 - G 83 -9.6 -4.27443 | gap 1, overlap 1176628 GCAGGACGAAAAGAA TGC-CGACCAGCGCAGG ACG CCAGCGCTCGTCGAGCG GATAGCGGCCGAAAA TERM 1003 1176661 - 1176628 - G 73 -13.1 -3.15743 | gap 1, overlap 1176627 CAGGACGAAAAGAAT GC-CGACCAGCGCAGG ACG CCAGCGCTCGTCGAGC GGATAGCGGCCGAAA Smed_1107 1178188 - 1176995 - | polar amino acid ABC transporter, inner membrane subunit TERM 1004 1178244 - 1178276 + r 79 -13.4 -3.05294 | gap 2, overlap 1178270 CTTTATCGGGTTCTT CGCCCGGGGGAACGGC GAC GCCG--CCCCCGGGCA TATTGGCCGGTTTAG Smed_1108 1179313 - 1178288 - | cationic amino acid ABC transporter, periplasmic binding protein Smed_1109 1179427 - 1180836 + | cystathionine beta-lyase TERM 1005 1180848 - 1180882 + T 80 -10 -4.08216 | gap 1, opp_overlap 1180847, overlap 1180852 CTGACGCCGAATGAC GCGGTGGGGAAGGCG ATGAGG CGCCT-CCCCATCAC TTTTGCGCGCCATAG Smed_1110 1182048 - 1180879 - | monooxygenase FAD-binding TERM 1006 1182029 - 1181988 - G 86 -15.1 -3.64703 | gap 1, overlap 1181989 GCCGGGCGAGGCAAA GCGCGGTCGTCAGC-CCGGC GAT GCCGGCGCCGACGATCGCAA CCCGCTCAGCCTTTT TERM 1007 1182028 - 1181989 - G 87 -18.6 -2.78679 | gap 1, overlap 1181988 CCGGGCGAGGCAAAG CGCGGTCGTCAGC-CCGGC GAT GCCGGCGCCGACGATCGCA ACCCGCTCAGCCTTT Smed_1111 1182321 - 1182076 - | hypothetical protein TERM 1008 1183045 - 1183027 - g 71 -5.9 -4.38171 | overlap 1183019 1183028 CAGACCAGACGAAAA GCGATCG TCAGG CGCTCGC CGCCTGCATATCGAC Smed_1112 1182501 - 1183286 + | alpha/beta hydrolase fold TERM 1009 1183560 - 1183589 + G 72 -2.7 -4.67607 | gap 1, opp_overlap 1183550, overlap 1183562 GAAGAGGCGCGTCTT GCCGCCGAGCG-CG ACC CGATGCTTGCCGCC TTTCTTTATTCCACG Smed_1113 1183473 - 1184300 + | serine O-acetyltransferase Smed_1114 1184454 - 1184657 + | hypothetical protein TERM 1010 1184753 - 1184731 - f 100 -9.9 -5.00884 | gap 1, opp_overlap 1184731 ATTGCCCTGAAAAAA CCGGCCCTGA GCAA TCAGG-CCGG TTTTTTCGCTATAAG TERM 1011 1184731 - 1184753 + F 100 -9.9 -5.1287 | gap 1, opp_overlap 1184731 ATTGCCCTGAAAAAA CCGGCCCTGA GCAA TCAGG-CCGG TTTTTTCGCTATAAG Smed_1115 1184905 - 1185258 + | phasin family protein TERM 1012 1185285 - 1185311 + F 100 -23 -3.37493 | ATCACCTTTGCAGAG GGCCGGTCGCGG ATG CCGCGGCCGGCC TTCGTCTATTCGGAG clpS 1185528 - 1185881 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1013 1186650 - 1186638 - g 80 -4.7 -4.84146 | ATCATAGAAAAGAAA GTGCC AGA GGCGC TGCAGGACGCCACGA TERM 1014 1187481 - 1187450 - g 70 -10.1 -3.61268 | overlap 1187442 GACGGAAGTGGCAAA GCAACTCGCCACC TCGCTC GGCGTCGAGCTGC TGCGCTTCGACATGT Smed_1117 1185891 - 1188407 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 1015 1188431 - 1188453 + F 100 -17 -4.30719 | AGATTGCGTGTGACT GTGCCGGGCG AGT TGCCCGGCAC TTTCTTGTGAGCGGG Smed_1118 1188482 - 1189228 + | AzlC family protein TERM 1016 1189459 - 1189481 + G 81 -2.6 -5.14563 | overlap 1189454 TGGCTCCGGCTCGGC GCCGTCGC AGTGGGC GCGATCGC TTTTTTCCTCGCCCG Smed_1119 1189234 - 1189569 + | hypothetical protein TERM 1017 1189608 - 1189597 - T 80 -2.2 -5.18371 | TCGTAGAAAAGAAAA GACA CAAC CGTC TGATTATATGCATCG Smed_1120 1190056 - 1189637 - | histidine triad (HIT) protein Smed_1121 1191288 - 1190101 - | hypothetical protein TERM 1018 1190647 - 1190661 + g 82 -3.4 -5.10497 | overlap 1190643 TATGCCGTTTTCGAC GGCCGC TCG GCGCTC TTTTTTCAATGCCTT Smed_1122 1192018 - 1191293 - | glycerophosphoryl diester phosphodiesterase Smed_1123 1192499 - 1192032 - | endoribonuclease L-PSP Smed_1124 1192640 - 1193458 + | hypothetical protein Smed_1125 1193831 - 1193619 - | hypothetical protein TERM 1019 1194990 - 1195017 + G 91 -12 -4.37886 | gap 1 CTGATCGTCTTCGGC GGCCATCTCGGCG ACG CGCCG-GATAGCC TTTTCTCGCACCTGC Smed_1126 1194060 - 1195175 + | ROK family protein Smed_1127 1195172 - 1195975 + | binding-protein-dependent transport systems inner membrane component Smed_1128 1195972 - 1196775 + | ABC transporter related Smed_1129 1196783 - 1197784 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 1020 1197798 - 1197821 + F 88 -11.6 -4.18197 | opp_overlap 1197790 1197798, overlap 1197799 AGTCAAAGGCCAACA CGCCGGCGGG TAAC CTCGCCGGCA TTTTCCATCGAGACT TERM 1021 1197821 - 1197798 - f 73 -12.4 -3.12936 | gap 1, opp_overlap 1197798 1197799, overlap 1197790 AGTCAAAGGCCAACA CGCCGGCG-GG TAA CCTCGCCGGCA TTTTCCATCGAGACT TERM 1022 1197799 - 1197820 + F 85 -15.1 -3.10597 | opp_overlap 1197798 1197790, overlap 1197798 GTCAAAGGCCAACAC GCCGGCGGG TAAC CTCGCCGGC ATTTTCCATCGAGAC Smed_1130 1197841 - 1199454 + | sulfatase TERM 1023 1199828 - 1199857 + G 73 -6.3 -4.2828 | gap 1, overlap 1199832 CCCTGCAGGTTGTCA GCGACACCGTCGCC AGC GGCGGCCGCGT-GC TTTTCGTCGGTACCA TERM 1024 1200192 - 1200178 - g 70 -10 -3.67775 | opp_overlap 1200171 1200170 ATCGCGATCGAAGAA GCCAAG CGC CTTGGC ATTCCGGTTGTTGCC rpsB 1199650 - 1200417 + | 30S ribosomal protein S2 TERM 1025 1200464 - 1200499 + F 71 -7.7 -4.06419 | gap 1, overlap 1200461 1200467 CATGAAATATCGGGG CGAGGCCGTTTGTGAT GTCGA ATC-TGAACGGCCTTG TTCTTTATCAGCCGG TERM 1026 1201495 - 1201475 - g 73 -3.2 -4.68506 | opp_overlap 1201467, overlap 1201467 1201466 1201477 AAGGAAGCGGAAAAA TCCGTTGG TGCGC CCATCGAA GTCGCTGGCATTGCC tsf 1200665 - 1201588 + | elongation factor Ts TERM 1027 1201646 - 1201612 - f 74 -6.3 -4.43681 | gap 1, opp_overlap 1201617 CATCGAACAGGAAAA CGTGGGGGCATCGCGT GACA ACGCGGTGCCCTT-CG TGTATCCGGCTCCAG TERM 1028 1201617 - 1201642 + F 90 -16.9 -3.322 | opp_overlap 1201612 AACAGGAAAACGTGG GGGCATCGCGT GACA ACGCGGTGCCC TTCGTGTATCCGGCT pyrH 1201772 - 1202494 + | uridylate kinase frr 1202546 - 1203106 + | ribosome recycling factor Smed_1135 1203128 - 1203886 + | undecaprenyl diphosphate synthase Smed_1136 1203886 - 1204719 + | phosphatidate cytidylyltransferase TERM 1029 1205334 - 1205320 - g 82 -11.4 -4.07885 | opp_overlap 1205329 1205330 1205332 CAGTGCCGCGGAAAA GGCAGG GGT CCTGCC CGGAGACAGGCTGTT Smed_1137 1204850 - 1205974 + | putative membrane-associated zinc metalloprotease Smed_1138 1206223 - 1208556 + | surface antigen (D15) TERM 1030 1208688 - 1208723 + G 77 -14.7 -2.87132 | gap 1, overlap 1208712 1208714 1208716 AATTGCTGGATGCTA CCGCCGCCGACCGCGC AGTGC GTGCGGTCG-CGCCGG TCTATCGCGCCAAGG lpxD 1208600 - 1209664 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 1209657 - 1210121 + | (3R)-hydroxymyristoyl-ACP dehydratase Smed_1141 1210124 - 1210936 + | UDP-N-acetylglucosamine acyltransferase Smed_1142 1210936 - 1211823 + | hypothetical protein TERM 1031 1212628 - 1212663 + G 83 -14.6 -3.41051 | AATGGGAGGCTTTCG CCGAAGCCGACGCGGC CATA GCCGCATCGGGTACGG TTATCCTCGAGCTGG lpxB 1211820 - 1213019 + | lipid-A-disaccharide synthase TERM 1032 1213132 - 1213181 + T 88 -13.5 -3.65554 | gap 1, overlap 1213133 1213140 1213141 GCGAACGTGCCGCGA CGCC-CCTCGCGTCATCCTCGGGT CAA GCCCGAGGATGACGGTTGGTGGGG CTTTTTGTTGCCTGC TERM 1033 1213133 - 1213182 + T 100 -15.2 -5.10461 | gap 3, overlap 1213132 1213140 1213141 CGAACGTGCCGCGAC GCCCC-TC-GC-GTCATCCTCGGGT CAA GCCCGAGGATGACGGTTGGTGGGGC TTTTTGTTGCCTGCG TERM 1034 1213140 - 1213172 + T 100 -18.5 -3.1883 | overlap 1213132 1213133 1213141 GCCGCGACGCCCCTC GCGTCATCCTCGGGT CAA GCCCGAGGATGACGG TTGGTGGGGCTTTTT TERM 1035 1213141 - 1213171 + T 100 -22 -2.50575 | overlap 1213140 1213132 1213133 CCGCGACGCCCCTCG CGTCATCCTCGGGT CAA GCCCGAGGATGACG GTTGGTGGGGCTTTT gltA 1214495 - 1213206 - | type II citrate synthase TERM 1036 1215809 - 1215827 + G 73 -8.8 -4.05446 | CTCCGGGCTTAACAT GGTGCTCG CCG CGGGTACC TTTCTGATTGGCGCC TERM 1037 1216838 - 1216851 + G 74 -5.2 -4.65895 | overlap 1216836 AGCTTTGCTGGCTTC CGCC AAAGTG GGCG TTTTTACGTGCCGGA Smed_1145 1214802 - 1217201 + | ComEC/Rec2-related protein Smed_1146 1217427 - 1218404 + | TonB-system energizer ExbB type-1 Smed_1147 1218412 - 1218837 + | TonB system transport protein ExbD type-1 TERM 1038 1219046 - 1219004 - f 100 -20.8 -4.52143 | opp_overlap 1219008 1219010 CGCAAAGACAACAAA CTGAAGCGTGTCGCATGATT TCG ATTGATGCGACACGCTTCAG GCAACAGAGTGGCAG Smed_1148 1219126 - 1219785 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1039 1219837 - 1219858 + F 70 -5.1 -4.49317 | opp_overlap 1219833, overlap 1219839 1219840 TGACGCTGAAACTGC AATGTTGCC GAAC GGCAACGTA TTATTTGTTTCTTTT TERM 1040 1220412 - 1220426 + G 86 -7 -5.0538 | opp_overlap 1220405, overlap 1220406 1220410 TGAACAATGTCCGCG CCGCCG AAG CGGAGG TTTTTTCGAGTCGCG TERM 1041 1220664 - 1220696 + G 70 -7.6 -4.04206 | gap 1 AGTCGCTGCTCGTCG CTGCCGTCGCGCAGC TGAA GCAGAGCGA-GGCGG TTTATGTGCAGATCG Smed_1149 1220069 - 1221439 + | TolC family type I secretion outer membrane protein TERM 1042 1221491 - 1221519 + F 72 -9.5 -3.66178 | gap 1, opp_overlap 1221484 1221479 1221508 GAACATGACGCACGA CGCCGCGTGGCC GATAAG GGAC-CGCGGCG TTTCGCGTTACGGCG Smed_1150 1221690 - 1222472 + | hypothetical protein TERM 1043 1222675 - 1222697 + F 87 -9.8 -4.62471 | TGTTTCAACGAGGAG GCCGCGTTCG CGA TGAAAGCGGC TTTTTCCCCGTTCAG TERM 1044 1223778 - 1223765 - g 73 -8.1 -4.00445 | CACGATCAAGAACAA CGAGG ATTT CCTCG AGGGCCTCGACCATC valS 1222779 - 1225622 + | valyl-tRNA synthetase TERM 1045 1225648 - 1225669 + F 100 -15.9 -5.24531 | opp_overlap 1225645 GAGGCGAGACCATGA TCCGCGGCA GCAT TGCCGCGGA TTTTTTATAGCGGCT TERM 1046 1225942 - 1225923 - f 70 -12.2 -2.78798 | opp_overlap 1225936, overlap 1225922 AGGTCTTACGTAAAT TTGGCGGA GGTC TCCGCCAA GGCGGTTCGGGGCCC Smed_1152 1226053 - 1227300 + | membrane protein involved in aromatic hydrocarbon degradation TERM 1047 1227323 - 1227342 + F 100 -16.4 -5.43414 | GCATCGAGTGCTCTG GGCCCGGC TTGC GCCGGGCC TTTTTTGTATCTGGT Smed_1153 1227758 - 1228561 + | Sel1 domain-containing protein Smed_1154 1229387 - 1228596 - | exodeoxyribonuclease III Xth Smed_1155 1229573 - 1231036 + | phospholipase D/transphosphatidylase Smed_1156 1231381 - 1231052 - | iron-sulfur cluster assembly accessory protein Smed_1157 1231597 - 1232814 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 1048 1232822 - 1232840 + F 81 -8.8 -4.27316 | overlap 1232829 TGCGCTAGTGACGCC CCCGCG TGGAGGC CGCGGG TTTTCGATTGACCCG argS 1232913 - 1234670 + | arginyl-tRNA synthetase TERM 1049 1237293 - 1237264 - g 81 -9.9 -4.11216 | gap 1 TTCGGAGTGTGAAAA CGTCCGCGC-TGCC TCA GGCACGCCCGGCCG CTCAGCCGCAAGCGG Smed_1159 1234734 - 1237634 + | sporulation domain-containing protein TERM 1050 1237641 - 1237699 + F 71 -7.3 -4.2349 | gap 1, opp_overlap 1237657 1237658, overlap 1237651 1237658 ACGAAGTAATGCGTA -AGCGGGGCAACGAAAACGGGCGCGGCA GGAA TGCCGCGCCCTTTCTCGTTGTCAGGAGA TTTTCGCTGTGCACG TERM 1051 1237651 - 1237688 + F 100 -19.9 -3.30903 | opp_overlap 1237657 1237658, overlap 1237641 1237658 GCGTAAGCGGGGCAA CGAAAACGGGCGCGGCA GGAA TGCCGCGCCCTTTCTCG TTGTCAGGAGATTTT TERM 1052 1237682 - 1237657 - f 100 -16.1 -4.4078 | opp_overlap 1237651 1237641 1237658, overlap 1237658 GCGGGGCAACGAAAA CGGGCGCGGCA GGAA TGCCGCGCCCT TTCTCGTTGTCAGGA TERM 1053 1237658 - 1237681 + F 100 -19.6 -4.1021 | opp_overlap 1237658 1237657, overlap 1237651 1237641 CGGGGCAACGAAAAC GGGCGCGGCA GGAA TGCCGCGCCC TTTCTCGTTGTCAGG TERM 1054 1237681 - 1237658 - f 100 -19.6 -3.24146 | opp_overlap 1237651 1237641 1237658, overlap 1237657 CGGGGCAACGAAAAC GGGCGCGGCA GGAA TGCCGCGCCC TTTCTCGTTGTCAGG Smed_1160 1237755 - 1238789 + | Beta-N-acetylhexosaminidase Smed_1161 1238891 - 1239709 + | chromosome segregation and condensation protein ScpA Smed_1162 1239702 - 1240430 + | putative transcriptional regulator Smed_1163 1240498 - 1241616 + | ABC transporter related tatA 1241855 - 1242061 + | twin argininte translocase protein A TERM 1055 1242708 - 1242664 - g 70 -9.8 -3.61398 | gap 1, overlap 1242665 1242668 CGCCCCGTTGAAGAA GCCACGCGCTTCGGCCGCGGC GGAC GCCGCTGGCGAGGCGCGCC-C GAAGAAGTCGCCGGC TERM 1056 1242705 - 1242668 - g 86 -18.3 -2.6563 | overlap 1242664 1242665 CCGTTGAAGAAGCCA CGCGCTTCGGCCGCGGC GGAC GCCGCTGGCGAGGCGCG CCCGAAGAAGTCGCC Smed_1165 1242134 - 1242802 + | sec-independent translocase Smed_1166 1242799 - 1243641 + | Sec-independent protein translocase, TatC subunit TERM 1057 1244912 - 1244894 - g 86 -6.6 -5.093 | overlap 1244896 CGGAAAAGAAGAAAA GGGGACGA AGT TCGCCCAC ACGCTGAACGGTTCC Smed_1167 1243773 - 1245056 + | seryl-tRNA synthetase surE 1245158 - 1245928 + | stationary phase survival protein SurE TERM 1058 1246023 - 1246039 + G 72 -7.9 -4.18018 | overlap 1246015 TCTGAAGGCCGTGGA GCAGACG CCC CGGCTGC TTTTCGCTCCGCCGC pcm 1245925 - 1246578 + | protein-L-isoaspartate O-methyltransferase Smed_1170 1246741 - 1247391 + | biotin-regulated protein TERM 1059 1247723 - 1247741 + G 70 -11.6 -3.22951 | overlap 1247720 GGTTGCAGTTCTGAC GCCAGCCG CTT CGGCGGGC TCTTCTCGCGGTCTG Smed_1171 1247627 - 1249156 + | peptidase M23B TERM 1060 1249261 - 1249204 - T 100 -30.8 -3.55486 | opp_overlap 1249212 1249219, overlap 1249209 1249219 ACTTAAGAGCAAACA CGAGACGATCGAAAACGCCGCGCGGC TGACAG GCCGCGCGGCGTTTTCGATCGTTGCA GCCTTGCTACGGCAG TERM 1061 1249256 - 1249209 - T 100 -35.9 -2.98881 | opp_overlap 1249212 1249219, overlap 1249204 1249219 AGAGCAAACACGAGA CGATCGAAAACGCCGCGCGGC TGACAG GCCGCGCGGCGTTTTCGATCG TTGCAGCCTTGCTAC TERM 1062 1249212 - 1249253 + T 100 -31.1 -2.72379 | opp_overlap 1249209 1249204 1249219, overlap 1249219 GCAAACACGAGACGA TCGAAAACGCCGCGCGGCT GACA GGCCGCGCGGCGTTTTCGA TCGTTGCAGCCTTGC TERM 1063 1249246 - 1249219 - T 100 -21.3 -4.22652 | opp_overlap 1249219 1249212, overlap 1249209 1249204 CGAGACGATCGAAAA CGCCGCGCGGC TGACAG GCCGCGCGGCG TTTTCGATCGTTGCA TERM 1064 1249219 - 1249246 + T 100 -22 -4.23892 | opp_overlap 1249209 1249204 1249219, overlap 1249212 CGAGACGATCGAAAA CGCCGCGCGGCT GACA GGCCGCGCGGCG TTTTCGATCGTTGCA Smed_1172 1250435 - 1249560 - | hypothetical protein TERM 1065 1249787 - 1249775 - G 71 -9.1 -3.70478 | overlap 1249741 1249777 1249782 AGAAACCCAGCCAAA GACCG AAG CGGTC GGACAGCGACACCTT TERM 1066 1250563 - 1250574 + H 78 -3.6 -4.87665 | overlap 1250561 CGAATCCATTGAGGC TGCC CGGC GGCG TTTTTCTCGGTAGCA Smed_1173 1250772 - 1251104 + | preprotein translocase, YajC subunit Smed_1174 1251265 - 1253841 + | bifunctional preprotein translocase subunit SecD/SecF TERM 1067 1253875 - 1253863 - g 71 -9.1 -3.71148 | opp_overlap 1253863 1253862 CAAAAGGGATCGAAA TGCGC GAA GCGCA CTTTCCGGGACGGGC Smed_1175 1253844 - 1254230 + | hypothetical protein Smed_1176 1254252 - 1255094 + | putative phytoene synthase protein Smed_1177 1255176 - 1255631 + | hypothetical protein Smed_1178 1257083 - 1255641 - | tRNA (uracil-5-)-methyltransferase Gid TERM 1068 1257153 - 1257124 - R 100 -18.7 -4.15044 | opp_overlap 1257130, overlap 1257102 1257125 1257130 TTCGCTTCCAAGAAA CGAAAACGGCGCC CGAG GGCGCCGTTTTCA AGCTGTGCAATGCTC TERM 1069 1257152 - 1257125 - R 100 -20 -3.08812 | opp_overlap 1257130, overlap 1257102 1257124 1257130 TCGCTTCCAAGAAAC GAAAACGGCGCC CGAG GGCGCCGTTTTC AAGCTGTGCAATGCT TERM 1070 1257130 - 1257147 + r 100 -14.1 -4.13014 | opp_overlap 1257102 1257125 1257124 1257130 TCCAAGAAACGAAAA CGGCGCC CGAG GGCGCCG TTTTCAAGCTGTGCA TERM 1071 1257147 - 1257130 - R 100 -14.1 -4.67942 | opp_overlap 1257130, overlap 1257102 1257125 1257124 TCCAAGAAACGAAAA CGGCGCC CGAG GGCGCCG TTTTCAAGCTGTGCA Smed_1179 1257318 - 1257175 - | hypothetical protein TERM 1072 1257553 - 1257577 + r 81 -12.7 -3.53012 | opp_overlap 1257553 GCAGATAAAGAAAAA CGCCCGCCGGC AGA GCCGGAAGGCG TTTGAAAGGCCAAGA TERM 1073 1257577 - 1257553 - R 100 -14.9 -5.42975 | opp_overlap 1257553 GCAGATAAAGAAAAA CGCCCGCCGGC AGA GCCGGAAGGCG TTTGAAAGGCCAAGA Smed_1180 1257814 - 1257614 - | hypothetical protein TERM 1074 1258076 - 1258041 - H 100 -11.9 -4.65032 | opp_overlap 1258041 1258040 1258044 1258068 GAAAGCAGAAATAAA CAACGCCCGCTGG GGGAGGAGGT CCAGCAGGCGTCG CTTGTTCTGATTGGC TERM 1075 1258343 - 1258317 - H 100 -18 -3.73982 | GGGAGAGGAAGAGAA CGCCCGCCGG GGGAGGA CCGGCGGGCG TCACAAAGGCGATTG TERM 1076 1259210 - 1259229 + G 70 -12.2 -3.14132 | CAAGTCGATCATGGC CGATCTCG TCAA CGAGATCG TTCGTGAAAAGCCGA TERM 1077 1259687 - 1259675 - g 71 -5.5 -4.25104 | GGCCGGCGATGAAAA GACCA TCA CGGTC ACGTTCCCGGCCGAC TERM 1078 1260381 - 1260366 - g 72 -2.4 -4.72986 | GACGCCGACGAAAAA CCGGCC AAGA AGACGG CTTCCAAGAAGAAGG tig 1259019 - 1260494 + | trigger factor TERM 1079 1260547 - 1260515 - T 100 -19.3 -3.33696 | opp_overlap 1260523, overlap 1260523 GTGTCTTGCAATGAA TTGAAAAAGCCGCCC TCC GGGCGGCTTTTTCTA TGCGCTGATGCCGGG TERM 1080 1260539 - 1260523 - T 100 -15.1 -4.77896 | opp_overlap 1260523, overlap 1260515 CAATGAATTGAAAAA GCCGCCC TCC GGGCGGC TTTTTCTATGCGCTG TERM 1081 1260523 - 1260539 + T 100 -15.1 -4.9792 | opp_overlap 1260523 1260515 CAATGAATTGAAAAA GCCGCCC TCC GGGCGGC TTTTTCTATGCGCTG Smed_1182 1263748 - 1260884 - | glycine dehydrogenase TERM 1082 1262824 - 1262794 - G 73 -11 -3.64703 | opp_overlap 1262777 1262813 GCGTCTGCAGCGAAA GCCGATAGGCGCGG TTT CCGCGCGCGTCGAC CGACACGCCCACGAG TERM 1083 1263021 - 1262980 - G 72 -7.2 -4.13767 | gap 2, opp_overlap 1263007 CCGGCGACTTCAAAA GCGCCAGCGCCAGCGGATCG GCTG CGA-CGGC-GGCGATTGCGC CCAGTTCGTGGAGCC Smed_1183 1264110 - 1263748 - | glycine cleavage system protein H Smed_1184 1265266 - 1264127 - | glycine cleavage system aminomethyltransferase T TERM 1084 1264439 - 1264470 + g 81 -8 -4.4715 | gap 1, opp_overlap 1264439, overlap 1264434 1264455 GTCGGCGCCGGGAAA GCCGCCTGCGC GCTCACCGTCG GCGC-GGCGGC TTTTCTGGATTGCCC TERM 1085 1264570 - 1264546 - G 72 -7.7 -4.12532 | overlap 1264542 TGCCGTAGAGACAAA GGCCCGCTTCG AGG CGGAGCGAGTC GCGCGCGCCGAGGCC TERM 1086 1264940 - 1264915 - G 85 -9.8 -4.33105 | TAACGACGAGGAAAA GATGATCGCC GCGATT GACGATCATC AGGTCGTCGAGAATG TERM 1087 1265223 - 1265193 - G 75 -11.8 -3.55071 | overlap 1265194 1265218 1265220 1265221 TCATAGCCGGCGAAA GGCACCATTCGCGC CCC GCGCGAAAGATGCA GCGCGTGCAGCGGCG TERM 1088 1265222 - 1265194 - G 78 -15.3 -2.72829 | overlap 1265193 1265218 1265220 1265221 CATAGCCGGCGAAAG GCACCATTCGCGC CCC GCGCGAAAGATGC AGCGCGTGCAGCGGC TERM 1089 1265675 - 1265717 + G 76 -9.3 -4.05788 | overlap 1265684 CGCGAGCGGAAATGG GGAATTGCG-GTGCGGCTGCT TGC AGCATTCGCACTCGT-ATTCC TTTCCTTTGCCCACC Smed_1185 1265651 - 1266043 + | hypothetical protein TERM 1090 1267006 - 1267026 + G 73 -12.5 -3.17075 | opp_overlap 1266992 AGCCCTTTGCCGAAG GCGACACCG TGC CGGTGACGC TTACCTTCGAGAAGG Smed_1186 1266132 - 1267115 + | hypothetical protein Smed_1187 1267575 - 1267210 - | hypothetical protein TERM 1091 1268598 - 1268564 - R 74 -13.5 -2.59748 | gap 1, overlap 1268560 GACGCGCATAACGGA CGGCGAGGCGCGTCGC GTAT GCGCCGC-CCTCGTCG AACTCAACGTCTCGA Smed_1188 1268835 - 1268674 - | hypothetical protein TERM 1092 1269664 - 1269701 + r 100 -30.1 -3.99553 | opp_overlap 1269667, overlap 1269667 CCTTGGCCTCTAATG CAATGCCGGGCCCGAAG TGTC CTTCGGGCCCGGCATTG TTCTTGTCTGTTGTT TERM 1093 1269667 - 1269698 + r 100 -26 -4.09374 | opp_overlap 1269667, overlap 1269664 TGGCCTCTAATGCAA TGCCGGGCCCGAAG TGTC CTTCGGGCCCGGCA TTGTTCTTGTCTGTT TERM 1094 1269698 - 1269667 - R 100 -26 -3.17075 | opp_overlap 1269664 1269667 TGGCCTCTAATGCAA TGCCGGGCCCGAAG TGTC CTTCGGGCCCGGCA TTGTTCTTGTCTGTT TERM 1095 1269779 - 1269812 + r 78 -10.9 -3.6422 | overlap 1269778 1269780 1269782 ATTGCGATATTTGAC CGAGTGCGCACCGCC GTTT GCCGATGCGCACTCC TGTTTTGCCGCAATG TERM 1096 1269780 - 1269811 + r 80 -14.4 -2.78211 | overlap 1269779 1269778 1269782 TTGCGATATTTGACC GAGTGCGCACCGCC GTTT GCCGATGCGCACTC CTGTTTTGCCGCAAT TERM 1097 1269926 - 1269887 - R 100 -19.4 -4.09685 | opp_overlap 1269882 1269881, overlap 1269865 1269888 GCTCATGCTTCAAAA CGAATGTGCCCCGCAGAC CGGC GTCAGCGAGGCACATTCA AAGTGGTCTGTTTGG TERM 1098 1269925 - 1269888 - R 100 -20.7 -3.05597 | opp_overlap 1269882 1269881, overlap 1269865 1269887 CTCATGCTTCAAAAC GAATGTGCCCCGCAGAC CGGC GTCAGCGAGGCACATTC AAAGTGGTCTGTTTG Smed_1190 1271907 - 1270069 - | hypothetical protein TERM 1099 1271785 - 1271775 - G 73 -6.8 -4.36914 | overlap 1271753 1271776 CCTTTCCGTATAAAA GTGG AAG CCAC CCGATTTCCATGAGC Smed_1191 1272986 - 1271904 - | hypothetical protein TERM 1100 1272658 - 1272674 + g 76 -13.7 -3.12668 | opp_overlap 1272649 1272648, overlap 1272649 TGAAAGCGGAGCACC GGCACGG TCT CCGTGCC TTCGCTATCGACATA Smed_1192 1275226 - 1273004 - | integrase, catalytic region TERM 1101 1273070 - 1273084 + g 83 -7.8 -4.62471 | GGCCGAATTCTGCTG GTTCGC CTT GCGGAC TTTTTCCCGCTTCGG Smed_1193 1275967 - 1275242 - | hypothetical protein Smed_1194 1276103 - 1275930 - | hypothetical protein TERM 1102 1276133 - 1276161 + r 83 -14.6 -3.0976 | opp_overlap 1276126 TGAGGACATGGAGAT GGACTGGAGCCG CTACC CAGCTCCAGTCC TGTTCACATCTTCCC Smed_1195 1276582 - 1276181 - | hypothetical protein Smed_1196 1277378 - 1278058 + | hypothetical protein Smed_1197 1278629 - 1278066 - | PilT domain-containing protein TERM 1103 1278895 - 1278872 - R 75 -9.6 -3.92625 | CACAGCGGAAGCAAA GCCTGGAGAA ACTA CTCTCCAAGC CCGGCCGTCTTCACG TERM 1104 1279023 - 1279001 - R 90 -4.9 -5.41143 | TAGTCCGCAAAAAAA TCTGTAGTT GCTGT AGCTACAGA CTTGACAAATAAAGT Smed_1198 1280253 - 1279081 - | hypothetical protein Smed_1199 1280677 - 1280261 - | MerR family transcriptional regulator Smed_1200 1280952 - 1281113 + | hypothetical protein Smed_1201 1281258 - 1281884 + | hypothetical protein TERM 1105 1281957 - 1281985 + G 80 -5.3 -4.82901 | gap 1, overlap 1281960 CACCTATGCCAATTC TCTGCGCATCGC GTTGAG GCGGTGCG-GGA TTTTTCTGAAGGGCG TERM 1106 1283083 - 1283066 - g 71 -5.5 -4.30014 | overlap 1283067 GGGACGAACTGAAAA CGATCGC GGTG GCGACCA GTGGCTATTCCGGGG Smed_1202 1281895 - 1283778 + | ATPase central domain-containing protein Smed_1203 1283788 - 1283919 + | hypothetical protein Smed_1204 1284179 - 1284985 + | hypothetical protein Smed_1205 1287438 - 1285540 - | DNA-cytosine methyltransferase TERM 1107 1287834 - 1287862 + H 77 -8.1 -4.39287 | opp_overlap 1287843, overlap 1287836 CGTCGTTCACCTGTT TTGAAGCGATGCT ACG AGCATCGCAACGA TTTTAATCTGATTGA Smed_1206 1287909 - 1289048 + | hypothetical protein Smed_1207 1291845 - 1289077 - | transcriptional regulator Smed_1208 1292044 - 1292457 + | hypothetical protein Smed_1209 1292493 - 1293305 + | short chain dehydrogenase Smed_1210 1293387 - 1293890 + | ketosteroid isomerase-like protein Smed_1211 1293918 - 1294742 + | short-chain dehydrogenase/reductase SDR Smed_1212 1294901 - 1296712 + | potassium efflux system protein Smed_1213 1296732 - 1297913 + | aminotransferase class V Smed_1214 1298010 - 1298720 + | ChaC family protein Smed_1215 1299180 - 1298896 - | hypothetical protein Smed_1216 1300911 - 1300036 - | metallophosphoesterase Smed_1217 1301653 - 1301015 - | hypothetical protein Smed_1218 1301966 - 1301676 - | hypothetical protein Smed_1219 1303857 - 1301983 - | hypothetical protein TERM 1108 1303643 - 1303620 - G 70 -7.5 -4.07687 | gap 1 AGCGTCCGCCGAAAA TCTCCATCGC CGATT GCGA-GGAGA CATCAATCTCCCGGC Smed_1220 1303876 - 1304346 + | transposase IS3/IS911 family protein Smed_1221 1304343 - 1304699 + | IS66 Orf2 family protein TERM 1109 1305113 - 1305156 + G 74 -12.7 -3.31144 | gap 3, overlap 1305115 GTTCGACCTGCATTG CA-TCGGCACGGATGTC-AGCG AGG CGCTCGACATC-GTGCCGGCTG TTGTCCGGGTCAAAC TERM 1110 1305115 - 1305153 + G 76 -15.5 -2.53271 | overlap 1305113 TCGACCTGCATTGCA TCGGCACGGATGTC-AGCG AGG CGCTCGACATC-GTGCCGG CTGTTGTCCGGGTCA Smed_1222 1304748 - 1305509 + | transposase IS66 Smed_1223 1306022 - 1307281 + | RNA-directed DNA polymerase (Reverse transcriptase) Smed_1224 1307335 - 1308207 + | transposase IS66 TERM 1111 1308494 - 1308464 - g 70 -10.4 -3.65812 | overlap 1308465 CGTTGCGGAATATAA CCGCATCTCGGCGA GCC TCGCCGAAACGCCA AAAGACCACCGGCCC TERM 1112 1308531 - 1308498 - g 72 -7.3 -4.24002 | GCCGAAACGCCAAAA GACCACCGGCCCAGG TTCA CCAGGATCGATGATC AGACCTTTGATGCCA Smed_1225 1308204 - 1308767 + | yecA family protein Smed_1226 1308956 - 1308825 - | hypothetical protein Smed_1227 1309464 - 1308943 - | hypothetical protein TERM 1113 1309235 - 1309248 + g 91 -9.5 -4.59773 | overlap 1309222 GTGTCATCCGGCATC GCGCC GTAA GGCGC TTTTTCCACGTAGGC Smed_1228 1310042 - 1309461 - | hypothetical protein TERM 1114 1310568 - 1310580 + r 75 -9.1 -4.00782 | opp_overlap 1310557 AAATGCCCGTCAACC GAGGC TCT GCCTC TTTGTCATGCTGTAG Smed_1229 1311133 - 1310585 - | hypothetical protein Smed_1230 1312345 - 1311269 - | patatin Smed_1231 1312793 - 1312302 - | hypothetical protein Smed_1232 1314096 - 1312774 - | hypothetical protein TERM 1115 1313598 - 1313559 - G 76 -9.3 -4.10161 | gap 1, overlap 1313562 CATTATGGTGGAAAA GCACGCCCGAACGCTCGG GGCCG CCGAGAATCCGGGC-TAC GGGCATGAGGTCGAC TERM 1116 1314129 - 1314155 + r 88 -10.9 -4.18197 | overlap 1314130 CTGCCTGCTTGCGAT CTTTCCGGCCA CCTAA TGGCCGGAAAA TTTTCAGTGCCGAGT TERM 1117 1314130 - 1314154 + r 83 -14.4 -3.10597 | overlap 1314129 TGCCTGCTTGCGATC TTTCCGGCCA CCTAA TGGCCGGAAA ATTTTCAGTGCCGAG Smed_1233 1318077 - 1314286 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1118 1316107 - 1316128 + g 70 -10.1 -3.6502 | overlap 1316110 CTTCTCTCCGAGCTC GACCGCCTG GTCC CAGGCGCTC TTTGCATGGGCGATC Smed_1234 1319581 - 1318778 - | hypothetical protein TERM 1119 1318880 - 1318893 + g 83 -9.5 -4.38712 | CGTCTTCTCCGGCTT GCGCG CCGG CGCGC TTTTCTCCAGATCCC TERM 1120 1319050 - 1319084 + g 76 -9.3 -4.07746 | CATCGGCAATCATCG GGTAGTCCG-CGTGCTC TGC GAGCGCGACGGCC-ACC TTGTATTTTTCGAGG uvrA 1322634 - 1319713 - | excinuclease ABC subunit A TERM 1121 1320385 - 1320404 + g 72 -4.2 -4.65895 | gap 1, opp_overlap 1320383, overlap 1320386 GTTGAACGAGAAACG GCCG-GGCT GGT AGCCGCGGG TTTTTGCCTCCGGCA TERM 1122 1320652 - 1320694 + g 78 -4.6 -4.70626 | opp_overlap 1320648, overlap 1320653 TCCGCCCGAAACGCC GGTGACGGCGGTGAAGACGC CGA GCGGAATCGATGCCGTCACA TTTTTCAGATTGTTG TERM 1123 1321855 - 1321834 - G 70 -8 -4.08692 | opp_overlap 1321837 1321839 1321853, overlap 1321837 GAATTTTTCCGAAAA CAAGACGC GCTCAT GCGTCTCG TTCAGCGATTTGTTG TERM 1124 1322098 - 1322110 + g 73 -3.3 -4.7373 | GCCGTCGACCTTTAC GCGCT GGA AGCCC TTTTTCATAAGCTCG TERM 1125 1322792 - 1322773 - H 100 -5 -5.89921 | overlap 1322784 ACTAGAACAAAAAAA GAACAAAG TCAG CTTCGTCC AAGCCAAATCAACTG Smed_1236 1322921 - 1323433 + | single-strand DNA-binding protein TERM 1126 1323495 - 1323450 - T 85 -15.5 -3.17212 | opp_overlap 1323430 1323466 CGACGACGGCAGCAA CGCTG-CGATCATCGGCCCGC TTCGTT GCGGGCCGACGA-CGTCCGCG AGGAAGCCACTTATC Smed_1237 1325914 - 1323506 - | TPR repeat-containing protein TERM 1127 1325803 - 1325815 + g 76 -9.1 -4.09685 | AATGCGGGCGGAGGA CTCGG ATG CCGAG TTTTGGCAGATAGCG Smed_1238 1326971 - 1325958 - | NapD-like protein TERM 1128 1327054 - 1327030 - R 100 -20 -3.78775 | opp_overlap 1326993 1327030 GCCCGGACGACGAAA CGGCCCCGGC TTCTC GCCGGGGCCG TGGTTGGACGGATCA TERM 1129 1327030 - 1327054 + r 100 -20 -2.71364 | opp_overlap 1327030, overlap 1326993 GCCCGGACGACGAAA CGGCCCCGGC TTCTC GCCGGGGCCG TGGTTGGACGGATCA Smed_1239 1328731 - 1327067 - | sulfatase TERM 1130 1327981 - 1327991 + g 74 -4.6 -4.56597 | CGTTGATGTAGAACG GCTG ATC CGGC TTTTTGGCGGCGGCA TERM 1131 1328000 - 1328027 + g 89 -12.8 -4.11216 | gap 1 ATCCGGCTTTTTGGC GGCGGC-ATCGAG GAA TTCGATTGCCGCC TTTTCGACATAGCCG TERM 1132 1328524 - 1328510 - G 74 -5.7 -4.48987 | GGCGTAGAAGGAAAA GAAGG TCATG CCTTC ATCCGCCAGCTTGTC Smed_1240 1329694 - 1329065 - | multiple antibiotic resistance (MarC)-related protein TERM 1133 1330341 - 1330375 + G 84 -15.6 -3.30124 | overlap 1330342 GGCCAGGGCAATTTC GGCTCGGTCGACGGCG ATC CGCCGGCGGCTGAGCG TTATACCGAATGCCG TERM 1134 1330342 - 1330374 + G 87 -19.1 -2.57931 | overlap 1330341 GCCAGGGCAATTTCG GCTCGGTCGACGGCG ATC CGCCGGCGGCTGAGC GTTATACCGAATGCC Smed_1241 1329990 - 1332785 + | DNA gyrase subunit A TERM 1135 1332806 - 1332836 + T 100 -22.6 -4.84359 | opp_overlap 1332802 1332799, overlap 1332808 CCGGAAGATGAGTTT CAGGCCCGCCGCTG GTC CAGCGGCGGGCCTC TTTTTATGGGCCTGC TERM 1136 1332808 - 1332834 + T 100 -25.2 -4.04397 | opp_overlap 1332802 1332799, overlap 1332806 GGAAGATGAGTTTCA GGCCCGCCGCTG GTC CAGCGGCGGGCC TCTTTTTATGGGCCT Smed_1242 1333942 - 1332956 - | lytic transglycosylase catalytic Smed_1243 1334524 - 1334015 - | GCN5-related N-acetyltransferase Smed_1244 1335378 - 1334560 - | aminoglycoside/hydroxyurea antibiotic resistance kinase TERM 1137 1334938 - 1334920 - G 95 -10.2 -4.45771 | AGCGGAAAAGAGAAA CCGCGCAG CAT CCGCGCAG GTCCCGAGAACGCCC TERM 1138 1335133 - 1335111 - G 72 -4.1 -4.62069 | gap 1 TCGCCATGTGAAAAA GCGATC-GTC GGCT GTCAGATCGC TCGATAAGGATCGCG TERM 1139 1335303 - 1335330 + g 71 -8.4 -3.91897 | gap 1 TCGTCCGCGTGAGGA TGGGCTCACCGGC GGG GTCGA-GAGCCCA TTTATCAATGAAGGA TERM 1140 1335385 - 1335407 + r 88 -13.4 -3.78953 | GATTCGCATCGTGAA GGGCCCGC CTGCTGA GCGGGCCC TTTCCTCATGGCGAT Smed_1245 1336557 - 1335436 - | NADH:flavin oxidoreductase/NADH oxidase Smed_1246 1336898 - 1336608 - | regulatory protein ArsR TERM 1141 1337044 - 1337018 - R 95 -7.3 -5.4477 | gap 1, opp_overlap 1337020 1337042, overlap 1337020 AAACGTGCAAAAAAA GAGGGCCACAAG AAAA CTTG-GGCCCTT TCAGTTGTGAAGGTT TERM 1142 1337042 - 1337020 - R 83 -9.9 -4.35085 | gap 1, opp_overlap 1337020, overlap 1337018 ACGTGCAAAAAAAGA GGGCCACAAG AAAA CTTG-GGCCC TTTCAGTTGTGAAGG TERM 1143 1337020 - 1337042 + r 75 -9.9 -3.80625 | gap 1, opp_overlap 1337020 1337018 ACGTGCAAAAAAAGA GGGCCACAAG AAAA CTTG-GGCCC TTTCAGTTGTGAAGG TERM 1144 1337246 - 1337219 - R 100 -6.3 -5.68023 | gap 1, opp_overlap 1337221, overlap 1337221 TCACAAGGAAAAAAA GAGGGCCACAAG AAGAA CTTG-GGCCCTT ATAGTTGTGAAGGTA TERM 1145 1337244 - 1337221 - R 82 -8.9 -4.46828 | gap 1, opp_overlap 1337221, overlap 1337219 ACAAGGAAAAAAAGA GGGCCACAAG AAGAA CTTG-GGCCC TTATAGTTGTGAAGG Smed_1247 1338433 - 1337537 - | LysR family transcriptional regulator TERM 1146 1337983 - 1337999 + g 71 -13.7 -2.57564 | overlap 1337982 GGATGAGATCCGATT GCTGCGG CTG CCGCAGC CTTATGGCGCAGTCC Smed_1248 1339639 - 1338665 - | thioredoxin reductase TERM 1147 1339227 - 1339217 - G 80 -4.6 -4.82901 | GTTGCGGTAGAAAAA CCCG TCG CAGG TGGCACAGGCGGATA TERM 1148 1339959 - 1339939 - H 74 -12.5 -2.93991 | overlap 1339934 1339941 CCCAAGGGAAGGAGA CAGCGCCCG GAT CAGGCGCCG CTGACGCGGCGCCTT TERM 1149 1340055 - 1340034 - H 74 -7.3 -4.3739 | gap 1 GATCGGCGGACAAAA GGCCTTTGCC GCA AGCA-AGGCC GACATGATTGGGGAT Smed_1249 1340078 - 1340548 + | AsnC family transcriptional regulator Smed_1250 1340646 - 1341458 + | glycosyl transferase family protein TERM 1150 1342411 - 1342442 + G 70 -7.8 -4.07568 | gap 1, opp_overlap 1342411 TTCGCGAGCGACTAA GCGCCGCCGGCCGCG AAA CCCTGCGGGCG-CGC TTTTCCGAAAAGGCA Smed_1251 1341477 - 1342508 + | phosphatidylserine decarboxylase Smed_1252 1342505 - 1343527 + | phosphatidylserine decarboxylase Smed_1253 1344612 - 1343557 - | glycosyl transferase group 1 TERM 1151 1343803 - 1343773 - G 70 -7.4 -4.10161 | TACGAGTTCCGAAAA GGCGCCGACATCGG TTG CCACCACCGGCACC CCGGTCGCCATGGCT greA 1345174 - 1344698 - | transcription elongation factor GreA TERM 1152 1344854 - 1344866 + g 77 -4.1 -4.91084 | overlap 1344838 CTCTTGATCGCCGAC GATCT GGT AGGTC TTTTCTTCTTCCGTA TERM 1153 1345225 - 1345193 - RH 79 -13.4 -3.1505 | gap 1, overlap 1345196 ATTATCCTTCATCAA GCACGCGGCGCCGCC TTTC GGCAGCGCCA-GCGC AAAAGAAAACGGCCT TERM 1154 1345224 - 1345196 - RH 86 -16 -2.78018 | gap 1, overlap 1345193 ATCCTTCATCAAGCA CGC-GGCGCCGCC TTTC GGCAGCGCCAGCG CAAAAGAAAACGGCC TERM 1155 1345263 - 1345235 - RH 100 -8.8 -5.09259 | gap 1 CAGCGCAAAAGAAAA CGGCCTCCGGAGC GCAA GCACCGGA-ACCG TTCAAACAACCGAAC Smed_1256 1347198 - 1346887 - | hypothetical protein Smed_1255 1345464 - 1346942 + | major facilitator transporter TERM 1156 1346947 - 1346935 - GT 71 -9.1 -3.7331 | overlap 1346933 AGGTTCACCAAAATA TGCCG TAG CGGCA AGGGAGCGGTTGCGG TERM 1157 1347305 - 1347277 - TR 85 -15.4 -3.14344 | opp_overlap 1347281, overlap 1347261 CATGCCGCCTAGGAA CGCAGCCTGAAC CGAGC GTTCAGACTGCG TTCAGAAGAATGAAG carB 1350821 - 1347330 - | carbamoyl phosphate synthase large subunit TERM 1158 1349703 - 1349724 + g 75 -13.7 -3.05384 | CTTGGCGGCGATCTT GGCGATCGG GAAG CCGGTCGCC TTCGATGCCAGCGCC TERM 1159 1350880 - 1350853 - R 78 -6.3 -4.57073 | gap 1, opp_overlap 1350876 TAGCTGCGCGAAAAA CCGGCCAGGT TGGGAGGTC ACC-GGCCGG GTCGCGCATTGATGG Smed_1258 1352065 - 1351031 - | alcohol dehydrogenase TERM 1160 1352181 - 1352204 + H 75 -8.8 -4.09739 | opp_overlap 1352186, overlap 1352182 AAACGATGCGCTGCA TGCAACCGCG TGAC CGCGATTGCG TTTTACAAGGATTGC TERM 1161 1352380 - 1352425 + G 80 -16.2 -2.64155 | gap 3, overlap 1352377 1352376 GGCCGAGGCGGTGGA TTCCGCCTGCCGG-GCGGCGGCG GCA TGC-GCCGCGCCGGC-GGCGGCA TGAGTTTCGGCACGC Smed_1259 1352284 - 1353219 + | protein of unknown function zinc metallopeptidase putative TERM 1162 1353217 - 1353265 + T 100 -15.2 -3.87994 | gap 1, overlap 1353220 1353222 TTCTCCGGCGGTGTC TGACC-GCGTGGCCGAACCGGGG CCAT CCCCGGTCCGGCGCCGCTGTTCA TTTCTGCCGCTCGCT TERM 1163 1353220 - 1353261 + T 91 -17.1 -3.60798 | overlap 1353217 1353222 TCCGGCGGTGTCTGA CCGCGTGGCCGAACCGGGG CCAT CCCCGGTCCGGCGCCGCTG TTCATTTCTGCCGCT TERM 1164 1353222 - 1353259 + T 100 -18.3 -3.37915 | overlap 1353220 1353217 CGGCGGTGTCTGACC GCGTGGCCGAACCGGGG CCAT CCCCGGTCCGGCGCCGC TGTTCATTTCTGCCG Smed_1260 1354261 - 1353263 - | aldo/keto reductase TERM 1165 1353316 - 1353329 + g 74 -9.5 -3.90744 | overlap 1353324 CTTCCGGATAGCGCG CGCCG GCAG CGGCG TTCTTTGGCACGGCG TERM 1166 1354447 - 1354466 + G 74 -10.6 -3.69354 | overlap 1354448 1354453 GCGCAGCTTTCGCAC GGCCGCGC GCAA GCGCGGCG TTTCCGCTTCTGCGC TERM 1167 1354448 - 1354465 + G 72 -14.1 -2.81291 | overlap 1354447 1354453 CGCAGCTTTCGCACG GCCGCGC GCAA GCGCGGC GTTTCCGCTTCTGCG TERM 1168 1355167 - 1355194 + G 88 -8.5 -4.73677 | gap 1, opp_overlap 1355178, overlap 1355167 1355168 GATTACGGTCCTTGA C-GCCTGGGAAA CGAGT TTTCCCGGGCCG TTTCTTTATTATGCG Smed_1261 1354379 - 1355287 + | LysR family transcriptional regulator TERM 1169 1355932 - 1355947 + G 71 -5.4 -4.46212 | gap 1, overlap 1355932 TGTCCTTGGGGAACT GGG-ACC AAG GGTGCCC TTTTATGGTGCCGCA Smed_1262 1355444 - 1356709 + | major facilitator transporter Smed_1263 1356867 - 1358270 + | MATE efflux family protein TERM 1170 1358418 - 1358383 - f 100 -14.7 -5.11063 | ATCATTGAAGAAAAA GAAAGCCGGACGGGC AGGGGA GACCGTCCGGCTTAC AGAGCGATCACATCA coaD 1358823 - 1359368 + | phosphopantetheine adenylyltransferase Smed_1265 1359393 - 1359983 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Smed_1266 1360008 - 1360517 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 1171 1360535 - 1360576 + F 80 -9.9 -4.23723 | opp_overlap 1360532, overlap 1360540 TGCGCTAATGCACTG ACACGCCCGCCCCAGTCGC GCGA GCCGCCGGGGCGGGTTTGC TTTTGGCTGATATTC TERM 1172 1360540 - 1360571 + F 100 -15 -4.21922 | opp_overlap 1360532, overlap 1360535 TAATGCACTGACACG CCCGCCCCAGTCGC GCGA GCCGCCGGGGCGGG TTTGCTTTTGGCTGA queA 1360595 - 1361677 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1173 1362605 - 1362624 + G 78 -15 -3.05463 | overlap 1362597 TCCTCCTGTCCGGCG GCGCGCGA CTAT TCGCGCGC TTACCTGCACCACCT tgt 1361678 - 1362808 + | queuine tRNA-ribosyltransferase Smed_1269 1363800 - 1362916 - | short-chain dehydrogenase/reductase SDR Smed_1270 1364582 - 1363797 - | hypothetical protein TERM 1174 1364221 - 1364250 + g 80 -6.2 -4.78107 | opp_overlap 1364217 GCCTGCATCAACGCC CCCAGTTCGGCG ATCGAA CGCCGCTCGGGG TTTTTGATCGTCGTC Smed_1271 1365180 - 1364593 - | isoprenylcysteine carboxyl methyltransferase Smed_1272 1365934 - 1365350 - | putative lipoprotein TERM 1175 1366037 - 1366092 + r 71 -11.1 -3.32023 | gap 1, opp_overlap 1366045 1366046, overlap 1366039 ACAGCCGGTCTAGCC CTGAATAACGTGCCGTGGGGAAGCAC TTATC GAGCGTCCCCACGGCACAA-AGTCAG TCTTACTTGTATACA TERM 1176 1366085 - 1366045 - R 100 -19 -3.62597 | opp_overlap 1366037 1366039, overlap 1366046 TCTAGCCCTGAATAA CGTGCCGTGGGGAAGCAC TTATC GAGCGTCCCCACGGCACA AAGTCAGTCTTACTT TERM 1177 1366084 - 1366046 - R 100 -20.3 -2.77344 | opp_overlap 1366037 1366039, overlap 1366045 CTAGCCCTGAATAAC GTGCCGTGGGGAAGCAC TTATC GAGCGTCCCCACGGCAC AAAGTCAGTCTTACT TERM 1178 1366375 - 1366327 - R 75 -9.8 -3.89346 | gap 1, opp_overlap 1366334, overlap 1366328 1366330 GGCCTAGTGCAGAAA GGACACAGTTGATAACCGCTTTA TGGT TACTG-GGTTATCAACTGTGTCG GAACACACGGCGCGT TERM 1179 1366374 - 1366328 - R 77 -13.3 -2.93393 | gap 1, opp_overlap 1366334, overlap 1366327 1366330 GCCTAGTGCAGAAAG GACACAGTTGATAACCGCTTTA TGGT TACTG-GGTTATCAACTGTGTC GGAACACACGGCGCG TERM 1180 1366473 - 1366430 - R 88 -13.8 -3.7795 | opp_overlap 1366425, overlap 1366472 GGAAACGCCATCAAA CGATCAGTACCGCCGTGCCC ACCG GGGTACGGCTGTAAAGATCG ACGATATCCTCGTTC Smed_1273 1367006 - 1366425 - | ErfK/YbiS/YcfS/YnhG family protein Smed_1274 1367174 - 1367929 + | short-chain dehydrogenase/reductase SDR Smed_1275 1369179 - 1368013 - | major facilitator transporter TERM 1181 1370177 - 1370125 - g 100 -17.8 -3.6106 | gap 1, overlap 1370126 1370128 GGCAAGATCGTGAAA GCACTGCTTGGCCGGCTGCGC-GCG CCAA CGCCGCGCAACCGGCCAAAAAATGT CGAGGCTTACGATCT TERM 1182 1370176 - 1370126 - g 100 -21.3 -2.76315 | gap 1, overlap 1370125 1370128 GCAAGATCGTGAAAG CACTGCTTGGCCGGCTGCGC-GCG CCAA CGCCGCGCAACCGGCCAAAAAATG TCGAGGCTTACGATC TERM 1183 1370174 - 1370128 - g 90 -18.1 -2.92439 | gap 1, overlap 1370126 1370125 AAGATCGTGAAAGCA CTGCTTGGCCGGCTGCGC-GCG CCAA CGCCGCGCAACCGGCCAAAAAA TGTCGAGGCTTACGA Smed_1276 1369417 - 1370916 + | transcriptional regulator domain-containing protein Smed_1277 1371346 - 1370954 - | glutathione-dependent formaldehyde-activating GFA TERM 1184 1371402 - 1371444 + H 83 -5.5 -5.00616 | overlap 1371403 1371407 ACCTAATTCGTGAAT GTCGTCGGTTTAGAGCGGG ATAAG CTCGCTCTAAGCTGTTGGA TTTTTTACACCGAAG TERM 1185 1371407 - 1371439 + H 81 -12.8 -3.52177 | overlap 1371403 1371402 ATTCGTGAATGTCGT CGGTTTAGAGCGGG ATAAG CTCGCTCTAAGCTG TTGGATTTTTTACAC TERM 1186 1371747 - 1371710 - g 72 -13.5 -2.72379 | gap 1, opp_overlap 1371710 GCAACTTGCGAACGA TCCGATGGCACGG-TCAC GAA GCGATCCGCGCCATCGCA TATCTCGTGCGTGAC TERM 1187 1372293 - 1372347 + G 71 -13.5 -2.52464 | gap 2, overlap 1372291 1372297 TACCCTGACCTTTTC CGGGCGG-CCGGCG-GCCGTGATCTGT GCC GCGGAACGCAGCGCGCCGGTTCGCCTG TCGCTTGGACCGGAG TERM 1188 1372367 - 1372379 + G 74 -10.5 -3.7108 | TTGGACCGGAGGCTG GCCGG GTC CCGGC TTTCGGTCTCGGCAT Smed_1278 1371613 - 1373427 + | hypothetical protein TERM 1189 1374380 - 1374398 + G 72 -11.7 -3.28924 | GGGTGATGTGCTCGC CAGCGGG AAAAG CCCGCTG TTCTACACGGCGATC Smed_1279 1373424 - 1374722 + | type III effector Hrp-dependent outers Smed_1280 1374953 - 1375714 + | protein of unknown function DUF899 thioredoxin family protein TERM 1190 1375800 - 1375826 + T 70 -12.2 -2.72013 | opp_overlap 1375793, overlap 1375799 1375811 CTTAAAAGTCCATGC CGCCGCCGGC CGGAAGC GCCGGCGTCG ATTCCTTCTTGGGCT groEL 1377414 - 1375786 - | chaperonin GroEL TERM 1191 1377215 - 1377236 + g 81 -11.7 -3.90112 | TGCGCGCCCATATTC TCGAACTTG TCCT CAAGTTCGA TTTCCTTGGCGACGG Smed_1282 1377774 - 1377460 - | chaperonin Cpn10 TERM 1192 1377948 - 1377924 - H 90 -2.9 -5.75342 | GTCCTCGAAAAAAAA TAGCAGC GCTTCTGTCTG GCTGCTA ACAGGCTGGAAAGGA Smed_1283 1378047 - 1378319 + | Usg family protein Smed_1284 1378416 - 1378706 + | hypothetical protein Smed_1285 1380895 - 1378802 - | NADH:flavin oxidoreductase/NADH oxidase TERM 1193 1381257 - 1381273 + r 89 -6.5 -5.09204 | opp_overlap 1381240 GACATCCAAAAATCT CCAAGGC GAA GCCTTTG TTTTTATTGGAATGT Smed_1286 1382907 - 1381534 - | integrase catalytic region Smed_1287 1384034 - 1383033 - | integrase catalytic region TERM 1194 1384045 - 1384061 + r 81 -4.3 -5.09204 | GACATCCAAAAATCT CCAGGGC GAA GCCTTTG TTTTTATTGGCATGT Smed_1288 1385048 - 1384194 - | beta-lactamase domain-containing protein Smed_1289 1385831 - 1385052 - | TatD family hydrolase TERM 1195 1385400 - 1385382 - G 84 -8.8 -4.52897 | overlap 1385383 ACAATGAAGAAGAAA TGGGAAGG CGC CCTTCCCC GACTCCTCTGTCAGA TERM 1196 1385399 - 1385383 - G 72 -12.3 -3.30112 | overlap 1385382 CAATGAAGAAGAAAT GGGAAGG CGC CCTTCCC CGACTCCTCTGTCAG Smed_1290 1387396 - 1385846 - | methionyl-tRNA synthetase TERM 1197 1387496 - 1387481 - R 77 -2.4 -5.08601 | CCACGGCAAGAAAAA GCCTCC TCCC GGCAGC ACGACCTTCCCGGCA Smed_1291 1388631 - 1387600 - | DNA polymerase III subunit delta' Smed_1292 1389332 - 1388628 - | dTMP kinase TERM 1198 1389354 - 1389381 + r 77 -11.9 -3.6053 | overlap 1389350 CCCTGTTTAGCCGAT CGGCCCGGCGG AAGGAA CCGTCGGGACG TTCATTTGTCACAGC Smed_1293 1390544 - 1389390 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 1199 1389806 - 1389821 + g 70 -11.8 -3.17075 | opp_overlap 1389806 TCATTGCCAGATAGA CGCGGC GCTC GCCGCG TTGCATTGAGGCGGC Smed_1294 1391641 - 1390601 - | rare lipoprotein A TERM 1200 1391782 - 1391755 - H 71 -7 -4.25283 | gap 1 AGGTCCCCACGAAAA TTCGTC-GTCCCG AAA CGGAACAGTCGAA TAAAAATGACAACAA Smed_1295 1392328 - 1392552 + | hypothetical protein Smed_1296 1392610 - 1392855 + | hypothetical protein Smed_1297 1393356 - 1393030 - | hypothetical protein TERM 1201 1393227 - 1393258 + g 85 -14.4 -3.58726 | opp_overlap 1393223 CCTGTGACCAAGGGC GGTGCGGGCTGCTG TCCT CAGCGCCCTGCACC TTATCTCTGCCAGCC Smed_1298 1393439 - 1393711 + | hypothetical protein TERM 1202 1394910 - 1394937 + G 82 -14.8 -3.30771 | overlap 1394911 GGTTTGGGATTGGTA TCTGCGCTGGCG CGAA CGCCGGCGCGGG TTCTACACGATCTGG TERM 1203 1394911 - 1394936 + G 80 -16.1 -2.58249 | overlap 1394910 GTTTGGGATTGGTAT CTGCGCTGGCG CGAA CGCCGGCGCGG GTTCTACACGATCTG Smed_1299 1393900 - 1395969 + | hypothetical protein Smed_1300 1395969 - 1396283 + | hypothetical protein Smed_1301 1396280 - 1396540 + | hypothetical protein Smed_1302 1396640 - 1396972 + | hypothetical protein Smed_1303 1397015 - 1397209 + | hypothetical protein Smed_1304 1397300 - 1397743 + | hypothetical protein Smed_1305 1398783 - 1397752 - | DNA polymerase LigD ligase region TERM 1204 1397892 - 1397912 + g 75 -3.2 -4.84359 | gap 1 AGACGGCGCCCTTCC TCCGCAGCG CAAC CGCCG-GGA TTTTTGTCGCCATCC Smed_1306 1398855 - 1399307 + | hypothetical protein Smed_1307 1399300 - 1399515 + | hypothetical protein Smed_1308 1400646 - 1400014 - | hypothetical protein Smed_1309 1400801 - 1401037 + | hypothetical protein Smed_1310 1402007 - 1401717 - | hypothetical protein Smed_1311 1402408 - 1402004 - | hypothetical protein Smed_1312 1403328 - 1402405 - | peptidoglycan binding domain-containing protein TERM 1205 1403462 - 1403440 - R 100 -12 -4.46212 | CCGCTCATGACAAAA CCCCAGCACC CTC GGTGCTGAAG CCTATGGCGGTGCGT Smed_1313 1404400 - 1403501 - | hypothetical protein TERM 1206 1404472 - 1404454 - R 71 -11.7 -2.9155 | overlap 1404449 1404467 TGCGTTAAGAGCAGA GCGCGGT AGATG ACCGCGC CTCAGCCGCAACGGA Smed_1314 1407012 - 1404562 - | hypothetical protein TERM 1207 1407049 - 1407035 - R 100 -12.8 -5.69262 | CCATAAAAAGAAAAA GCCCGC TAG GCGGGC TGTAAACTGCTGATG Smed_1315 1409193 - 1407085 - | hypothetical protein Smed_1316 1409514 - 1409194 - | hypothetical protein Smed_1317 1409663 - 1410268 + | hypothetical protein Smed_1318 1410730 - 1410293 - | hypothetical protein TERM 1208 1410421 - 1410401 - G 71 -9 -3.72893 | GATTTCGCCAGTAAA GACGACGA TAGGC TCGCCGTC TGGCTGCTCGTATTC TERM 1209 1410486 - 1410464 - G 70 -7.6 -3.97834 | opp_overlap 1410464 CAATTTGACGACAAA CGGCGAGCCT TGC ACGCTTGCCG TCTCGTCGTAATCCC Smed_1319 1410899 - 1410720 - | hypothetical protein TERM 1210 1410949 - 1410929 - R 71 -10.4 -3.53444 | opp_overlap 1410947, overlap 1410925 1410947 GGTTCCAATAATCAA CCGCCTCG ACAAA CGAGACGG ACGGCAACGAGAATT Smed_1320 1411613 - 1410909 - | hypothetical protein TERM 1211 1411184 - 1411158 - G 73 -6.4 -4.25283 | opp_overlap 1411163, overlap 1411159 ATGGTTGTACGAAAA GCGCACGCCGAC GAG GTTGGCGTCGGC GTTGATGATGCGCAG TERM 1212 1411163 - 1411185 + g 70 -12 -3.21099 | opp_overlap 1411159 1411158 TGTACGAAAAGCGCA CGCCGACG AGGTTGG CGTCGGCG TTGATGATGCGCAGC Smed_1321 1413892 - 1411610 - | phage tape measure protein TERM 1213 1412590 - 1412600 + g 81 -2.4 -5.10208 | opp_overlap 1412590 CGGAGACCGAAACAG GGAC GAC GGCC TTTTTCTTACGCTTG TERM 1214 1412780 - 1412800 + g 72 -2.6 -4.78848 | gap 1, overlap 1412769 CAGGCGGGCGACGGC CTCGGTGTT GTCG AAT-CCGAG TTTTGTGTTTAGGGC Smed_1322 1413969 - 1414256 + | hypothetical protein Smed_1323 1414824 - 1414468 - | hypothetical protein Smed_1324 1415261 - 1414824 - | hypothetical protein Smed_1325 1415718 - 1415302 - | gene transfer agent Smed_1326 1416200 - 1415718 - | HK97 family phage protein TERM 1215 1415848 - 1415820 - G 71 -5.9 -4.26693 | overlap 1415817 1415821 CGAAACAAAGAAGAA TGGCGATGCCG CAATTGC CGGTATCGCCG CACCAGCAAACATGC Smed_1327 1416547 - 1416197 - | phage head-tail adaptor, putative TERM 1216 1416235 - 1416245 + g 75 -3.2 -4.82901 | overlap 1416223 TTGTCGCCAGCATGT CGAT GTA GTCG TTTTTCTGAGACACG Smed_1328 1417108 - 1416698 - | hypothetical protein TERM 1217 1416948 - 1416983 + g 78 -5.4 -4.72272 | gap 1, overlap 1416950 1416975 1416976 CTAGCCTGCCGCGCA GCGGCTG-TGGCCGA ATCGTTG TCGGCCAGCATCCAC TTTTTGGTGGACGCG Smed_1329 1417403 - 1417110 - | hypothetical protein Smed_1330 1418750 - 1417413 - | hypothetical protein Smed_1331 1419116 - 1418754 - | hypothetical protein Smed_1332 1419707 - 1419135 - | phiE125 gp8 hypothetical protein TERM 1218 1419472 - 1419452 - G 81 -3.9 -5.00884 | ATGGCGTGTAAAAAA CGCCAGTCA CCT CGATTAGCG GCGGCTTCGGTAAGT TERM 1219 1419880 - 1419844 - R 80 -9.6 -4.13014 | gap 2, overlap 1419875 GTTAGATCGCCAAAA TCACGCTCGTC--CCCGA CGT TCAGGTCAACGAGCGTGA GGCCATCCGCTGAAT Smed_1333 1420312 - 1419923 - | hypothetical protein TERM 1220 1420364 - 1420338 - R 87 -9.3 -4.59773 | opp_overlap 1420337 1420342, overlap 1420341 1420342 CCTTATTGTGAAAAA GAATGGGCGGC ACGAG GCCGCCCTTGC CTTTTGGCTATTAGG TERM 1221 1420361 - 1420341 - R 85 -9.6 -4.41633 | opp_overlap 1420337 1420342, overlap 1420338 1420342 TATTGTGAAAAAGAA TGGGCGGC ACGAG GCCGCCCT TGCCTTTTGGCTATT TERM 1222 1420342 - 1420360 + r 79 -13.1 -3.38683 | opp_overlap 1420341 1420338 1420342, overlap 1420337 ATTGTGAAAAAGAAT GGGCGGC ACGAG GCCGCCC TTGCCTTTTGGCTAT TERM 1223 1420360 - 1420342 - R 79 -13.1 -3.24256 | opp_overlap 1420342 1420337, overlap 1420341 1420338 ATTGTGAAAAAGAAT GGGCGGC ACGAG GCCGCCC TTGCCTTTTGGCTAT Smed_1334 1421649 - 1420375 - | HK97 family phage major capsid protein TERM 1224 1421310 - 1421347 + g 71 -8.9 -3.83102 | AGATATTCATCTCTC CGCGGGTGATGGCGCCG ACGA CGGCGCGAGCCCACGTG TTTGATCGTGATTTG Smed_1335 1422426 - 1421695 - | HK97 family phage prohead protease Smed_1336 1423666 - 1422413 - | HK97 family phage portal protein TERM 1225 1422943 - 1422932 - G 70 -7.2 -3.9712 | opp_overlap 1422921 CGAGTCGATGACAAA CGGC TTGT GCCG GTTGGCGCCGCTTAC Smed_1337 1425159 - 1423684 - | phage terminase Smed_1338 1425749 - 1425279 - | P27 family phage terminase small subunit Smed_1339 1426203 - 1425862 - | hypothetical protein Smed_1340 1426220 - 1426402 + | hypothetical protein Smed_1341 1426425 - 1426658 + | hypothetical protein TERM 1226 1426709 - 1426672 - T 70 -4.8 -4.42235 | opp_overlap 1426674, overlap 1426669 1426675 1426698 AAGCGGGAAAAACAA GAAGCGGCTACCTC AACCCGAAGG GAGGCAGCCGCGTG ATTGCCCGTCGCCGG TERM 1227 1426706 - 1426675 - T 90 -10.9 -4.31587 | opp_overlap 1426674, overlap 1426672 1426669 1426698 CGGGAAAAACAAGAA GCGGCTACCTC AACCCGAAGG GAGGCAGCCGC GTGATTGCCCGTCGC TERM 1228 1426832 - 1426816 - T 95 -10.8 -4.74103 | GCCTCAACGCAAAAA GGCCGC GCAAG GCGGCC TTCGGGGGAATTAAC Smed_1342 1428050 - 1426890 - | hypothetical protein Smed_1343 1428452 - 1428051 - | hypothetical protein Smed_1344 1428763 - 1428449 - | hypothetical protein Smed_1345 1428954 - 1428775 - | hypothetical protein Smed_1346 1431603 - 1429222 - | hypothetical protein Smed_1347 1432020 - 1431835 - | hypothetical protein Smed_1348 1433842 - 1432667 - | phage integrase family protein TERM 1229 1433476 - 1433486 + g 74 -4.6 -4.55128 | overlap 1433472 GCGTCATTCGCCACT GCGC GCG GTGC TTTTCATTTCGCCAT TERM 1230 1434168 - 1434213 + H 77 -11.7 -3.61178 | opp_overlap 1434154 1434152 ACACCGTCGTCAACT TGGCGGCGGCGGATGCTCGCA CTGC TGCGAGCAGCGTCCGACGGCA TTTCCGGTCCATCGC Smed_1351 1434625 - 1434909 + | hypothetical protein TERM 1231 1435329 - 1435342 + G 75 -3.1 -4.93316 | overlap 1435329 1435328 TGCCTGTTAAGTCTT TGCTG ACAG CAGTA TTTTTCGTCTTATTC Smed_1352 1435313 - 1435477 + | hypothetical protein TERM 1232 1435724 - 1435737 + G 72 -2.4 -4.78572 | CATGCTGACCCGCAA GCAA CAGGAA TTGC TTTTGTTCATTCACG TERM 1233 1436031 - 1435992 - g 78 -10.6 -4.08767 | GGCAGTCTCGGAAAA CCAGCCGCACCGGCTCCA GCCC CGAAACCGGCGCCACCGG CCGAGAACGCATCGG Smed_1353 1435710 - 1436426 + | LexA repressor Smed_1354 1437873 - 1436794 - | hypothetical protein TERM 1234 1438098 - 1438114 + H 71 -11.5 -3.21099 | GGTAAGGGTTGCGTC CGCCGGC ATC GTCGGCG TTACTGATGGCGCGA Smed_1355 1438134 - 1438487 + | putative transmembrane protein Smed_1356 1438843 - 1438523 - | hypothetical protein TERM 1235 1439065 - 1439042 - R 83 -13.8 -3.55761 | opp_overlap 1439042 GAGCCAGTTTCCAAA GCCCTGCACC TCAC GGTGCGGGGC TTTTTCTTTGGTGTT TERM 1236 1439042 - 1439065 + r 100 -16 -5.37171 | opp_overlap 1439042 GAGCCAGTTTCCAAA GCCCTGCACC TCAC GGTGCGGGGC TTTTTCTTTGGTGTT Smed_1357 1439457 - 1439107 - | hypothetical protein Smed_1358 1439512 - 1441575 + | beta-lactamase domain-containing protein Smed_1359 1442199 - 1441636 - | hypothetical protein TERM 1237 1442492 - 1442508 + H 76 -5.1 -4.78107 | overlap 1442493 TATTCTCGTAGGTTT TCATGCG CCT TGCATGG TTTTTCCTGGTACTC Smed_1360 1442494 - 1442838 + | small multidrug resistance protein Smed_1361 1442835 - 1443161 + | small multidrug resistance protein Smed_1362 1443997 - 1443149 - | short-chain dehydrogenase/reductase SDR TERM 1238 1444116 - 1444126 + H 74 -2.4 -5.00616 | overlap 1444099 CCGCCCGTCGATTGA CGGC AGA GACG TTTTTTGCCCGGGAC TERM 1239 1444940 - 1444924 - g 70 -12.3 -3.14881 | CAAGGCGGGGATCAA GATCGGC ATC GCCGATC CGGAAGGCGCGGCAC Smed_1363 1444310 - 1445350 + | cysteine synthase A TERM 1240 1445380 - 1445392 + G 73 -6.3 -4.27886 | GATCTGTCACCGCCC TCTTC CGA GAAGA TTTCTATCTTTCGAC TERM 1241 1445759 - 1445749 - g 71 -4.6 -4.51812 | TCGGAGAAGAAGAAA GCCG GGT CGAC TTCGACATGAGCGAA TERM 1242 1446068 - 1446056 - g 77 -2.6 -4.96468 | overlap 1446051 GAAAGGTAAAGAAAA CCGG CGTTT CCGA ATACGATTCGCGGCG Smed_1364 1445358 - 1446107 + | threonyl/alanyl tRNA synthetase SAD TERM 1243 1446417 - 1446430 + G 71 -8.1 -3.87815 | opp_overlap 1446417 1446420 GGGAATCGGCGAGAA CGACG TCAT CGTCG TTTATGACGGTCCGG TERM 1244 1446869 - 1446853 - g 70 -7.9 -4.09864 | ATCGATCTGTCAAAA CCGGTCG TCA CGACCTG CGGCTCCGGCGTAAC Smed_1365 1446142 - 1447005 + | rhodanese domain-containing protein Smed_1366 1447011 - 1447574 + | GCN5-related N-acetyltransferase Smed_1367 1447689 - 1448156 + | hypothetical protein Smed_1368 1449324 - 1448206 - | alanine dehydrogenase Smed_1369 1449480 - 1449941 + | AsnC family transcriptional regulator TERM 1245 1450092 - 1450106 + T 76 -12.8 -3.10474 | overlap 1450101 CGCCGGACCGTGCTC GGCGGC CTT GCCGCC TCTTCGGCTCTTGTC Smed_1372 1452462 - 1452142 - | hypothetical protein Smed_1373 1453774 - 1452527 - | threonine dehydratase TERM 1246 1453714 - 1453753 + g 74 -4.7 -4.60487 | GCTCATTGAGTTGAA GCGGCGTCGGCGGAAAG ATCTCG CGCATCGCCGCTGCCGC TTTTTCAACATCCTG TERM 1247 1454272 - 1454318 + G 73 -8.6 -4.08958 | overlap 1454258 ATCGGCGGTGACGAC GACCGGGTCGACCGTCATCG TCGGCCT CGATGACGCCCCGCCGGGTC TTCTTCTTTGGCGCT Smed_1374 1453934 - 1455388 + | cation transporter TERM 1248 1455468 - 1455447 - f 78 -3.7 -4.89393 | gap 1 GAAAGCTTACAAAAA TCGGGCATTC TGG GAA-GCACGA TGCCGAGACACCTGC Smed_1375 1455468 - 1456058 + | hypothetical protein Smed_1376 1456568 - 1456374 - | hypothetical protein Smed_1377 1456913 - 1457131 + | putative signal peptide protein Smed_1378 1457247 - 1457486 + | hypothetical protein TERM 1249 1457524 - 1457488 - T 93 -13 -4.29106 | gap 1, overlap 1457490 1457495 GCGCACAGCAATAAA CATCGAAGCGAGCCGCC GTTC GGCGGCTCGCC-CGAAA CTTCAGCCAAGGATG TERM 1250 1457522 - 1457490 - T 100 -17.8 -3.7456 | gap 1, overlap 1457488 1457495 GCACAGCAATAAACA TCGAAGCGAGCCGCC GTTC GGCGGCTCGCC-CGA AACTTCAGCCAAGGA TERM 1251 1457518 - 1457495 - T 100 -19.6 -3.28906 | overlap 1457490 1457488 GCAATAAACATCGAA GCGAGCCGCC GTTC GGCGGCTCGC CCGAAACTTCAGCCA Smed_1379 1457956 - 1457567 - | DGPFAETKE family protein Smed_1380 1458405 - 1458118 - | hypothetical protein Smed_1381 1458533 - 1458790 + | hypothetical protein Smed_1382 1459061 - 1458843 - | hypothetical protein Smed_1383 1459388 - 1459146 - | hypothetical protein TERM 1252 1459685 - 1459661 - R 79 -12.8 -3.36273 | TCGCCCCAAGAGGAA CGCACGGCCC AAGGG GAGCCGCGCG CAAACGTCGAAAGGC Smed_1384 1460306 - 1459704 - | TrpR binding protein WrbA Smed_1385 1460469 - 1461230 + | molybdopterin binding domain-containing protein Smed_1386 1461420 - 1461917 + | xanthine-guanine phosphoribosyltransferase Smed_1387 1463421 - 1461949 - | carbohydrate kinase, YjeF related protein TERM 1253 1463790 - 1463778 - g 86 -7.7 -4.72272 | TTTTCTCATGAAAAA GATCG AAG CGATC ATTAAGCCTTTCAAG Smed_1388 1463770 - 1464108 + | nitrogen regulatory protein P-II TERM 1254 1464137 - 1464154 + F 88 -14.1 -3.62572 | opp_overlap 1464099 1464135 CGACGTTACCACATC CGGGGCC ATCC GGCCCCG TTTCCAATCCTCGTC Smed_1389 1464190 - 1465599 + | glutamine synthetase, type I TERM 1255 1465653 - 1465676 + F 100 -12.4 -4.67353 | AAGGTGAACGACGGA GGCGGGTTTC ATCC GAGGCCCGCC TTTTTCAGTCAATGC TERM 1256 1465982 - 1465970 - g 71 -4.8 -4.48176 | CAGAAAACGAAGAAA GCGA GTACG TCGC CTATGTATCGGAACA Smed_1390 1465780 - 1466109 + | hemimethylated DNA binding protein TERM 1257 1466151 - 1466168 + T 100 -14.1 -4.81083 | TTTCGCGCGGTCTGA GCCCGGC GCAA GCCGGGC TTTTTCATGCTTGGG Smed_1391 1467046 - 1466267 - | ABC transporter related Smed_1392 1468087 - 1467056 - | transport system permease protein Smed_1393 1469094 - 1468087 - | transport system permease protein TERM 1258 1468156 - 1468141 - G 78 -6.8 -4.64048 | CACGAGATAAAGAAA GACCGG CCCG CCGATC AGCGCGGTGAAGATG Smed_1394 1470113 - 1469115 - | periplasmic binding protein TERM 1259 1469213 - 1469176 - G 71 -5.6 -4.28361 | gap 1 TCAACCGCAGGAAAA GTCTCCGGGTAAAGCAG ATGTG CCGCTTCACGCAG-GAC GATCTCCCGGGCAAT TERM 1260 1471241 - 1471260 + G 71 -9.2 -3.75153 | GCTGGTCCTGGCATC GCTGGTGC GAAT GCGCCGGC TTTGCATTCGAGCCG TERM 1261 1471417 - 1471433 + G 77 -13.7 -3.32844 | CTGTCTCCAACGTTG GCGCCGA TCG TCGGCGC TTATGAGATCGCAAA TERM 1262 1471463 - 1471476 + G 72 -3.8 -4.64598 | opp_overlap 1471453 1471457 AAGCACAGAGCGCTC GCCT GCCGCA AGGC TTTTTCGAATGGTTG Smed_1395 1470631 - 1471521 + | LysR family transcriptional regulator TERM 1263 1471549 - 1471577 + T 93 -12.3 -4.4078 | opp_overlap 1471549 GCCCGTACAAAAAAA GGGCGCCCGGATC GAT GACTCGGACGCCC TTTTCATTGAGGGAG TERM 1264 1471577 - 1471549 - T 100 -14.5 -5.60993 | opp_overlap 1471549 GCCCGTACAAAAAAA GGGCGCCCGGATC GAT GACTCGGACGCCC TTTTCATTGAGGGAG TERM 1265 1471605 - 1471617 + T 72 -9.1 -3.89501 | overlap 1471612 GAGTTGACGGTTACT GCTGC TTG GCAGC TTTCTGCGCCTCTTC Smed_1396 1472229 - 1471600 - | invasion associated locus B family protein TERM 1266 1472443 - 1472454 + H 75 -5.8 -4.67697 | overlap 1472416 TCGTTGCGCGATGTG GCAG GAGC CTGC TTTGTTCTTTTCCCG TERM 1267 1473021 - 1473002 - g 71 -13.6 -2.52896 | TCACCTTCGAATTGA TGCGCGAC AAAG GTCGCGCA CCCTTCAGCAACCGC Smed_1397 1472542 - 1474362 + | extracellular solute-binding protein TERM 1268 1474526 - 1474510 - g 75 -12.3 -3.62046 | CTATCTCGGCAAGAA TCGCCTG GCA CAGGCGA TCGCCAATGTCTCCG Smed_1398 1474445 - 1475110 + | DSBA oxidoreductase TERM 1269 1475160 - 1475112 - T 100 -21.8 -3.05463 | gap 1, opp_overlap 1475113 1475114 ACCCCGCGCACTGAA GCCCGCATAGCGGCGTACCGCCG CGTT CGGCTGCACTCCGCTATGCGG-C TTTTGCGAGCGCTGC TERM 1270 1475113 - 1475160 + T 100 -19.8 -4.08216 | opp_overlap 1475112, overlap 1475114 CCCCGCGCACTGAAG CCCGCATAGCGGCGTACCGCCG CGTT CGGCTGCACTCCGCTATGCGGC TTTTGCGAGCGCTGC TERM 1271 1475114 - 1475159 + T 100 -23.3 -3.04715 | opp_overlap 1475112, overlap 1475113 CCCGCGCACTGAAGC CCGCATAGCGGCGTACCGCCG CGTT CGGCTGCACTCCGCTATGCGG CTTTTGCGAGCGCTG Smed_1399 1478667 - 1475152 - | transcription-repair coupling factor TERM 1272 1475196 - 1475211 + g 76 -6 -4.64766 | GCGTCATGACCATTG CGGCAC CGGA GAGCCG TTTTTCCGGTGTGGC Smed_1400 1478975 - 1478664 - | hypothetical protein TERM 1273 1479481 - 1479439 - g 73 -8.5 -4.08692 | CAACTGGCTCGAAAA GGCCCTGCCGGTCGACGA-GA CGG TCATCGTC-AGCGGCAAGGTC GACTGGTTCAACGGG TERM 1274 1480911 - 1480887 - g 100 -14.9 -4.36914 | overlap 1480901 TCCTGCTTTACAAAA GCCCGCTCAGC GAA GCCGGGCGGGC TCGGCTCTCGGTCCT Smed_1401 1479092 - 1481197 + | ATP-dependent DNA helicase RecG Smed_1402 1481906 - 1481214 - | hypothetical protein Smed_1403 1482422 - 1481925 - | GCN5-related N-acetyltransferase TERM 1275 1482400 - 1482436 + g 70 -10.2 -3.55622 | gap 1 GCCTCGTCGTCGCCT TCGGTGTCCGGACGAAT GATC ATTCGACCGT-CACCGA TTTGGCGAGGTTGCG Smed_1404 1484245 - 1482419 - | D-fructose-6-phosphate amidotransferase TERM 1276 1482539 - 1482521 - G 72 -11.8 -3.35996 | opp_overlap 1482523 GACCGGCAGCGAGAA GATCATCG GTG CGATGATC TCGTCGACGAACGGC Smed_1405 1485793 - 1484423 - | nucleotidyl transferase TERM 1277 1484647 - 1484636 - G 70 -7.2 -3.97636 | opp_overlap 1484638 ATTGGAACCGATAAA GGCG TTCG CGCC AATGCGCGTGACGTG Smed_1406 1487607 - 1485961 - | sodium-dependent inorganic phosphate (Pi) transporter TERM 1278 1489526 - 1489487 - g 70 -7.2 -4.08216 | overlap 1489488 1489518 GGAGCGCGTGGAAAA GGGCGCCAAGCTCGC-CG ATATCG CGAGCGAACTTGGC-CTC GTGGTCGAGACCAAG TERM 1279 1489541 - 1489518 - g 71 -13.2 -3.06501 | overlap 1489487 1489488 GATATCGCGAGCGAA CTTGGCCTCG TGGT CGAGACCAAG ACCGGGCTGACCCGC Smed_1407 1487958 - 1489850 + | putative peptidyl-prolyl cis-trans isomerase protein TERM 1280 1489973 - 1489991 + G 76 -9.5 -3.96624 | opp_overlap 1489954 GTCCGGGGCGGCCAC GCCGTCG CAGAT CGGCGGC TTTCTCATGGCGCTC trpD 1489869 - 1490882 + | anthranilate phosphoribosyltransferase trpC 1490892 - 1491707 + | indole-3-glycerol-phosphate synthase moaC 1491707 - 1492201 + | molybdenum cofactor biosynthesis protein C Smed_1411 1492201 - 1493421 + | molybdenum cofactor synthesis domain-containing protein Smed_1412 1494004 - 1493423 - | hypothetical protein TERM 1281 1493786 - 1493756 - G 76 -11 -3.76482 | opp_overlap 1493772 CCAGATCAGGAAGAA CGCTGTCGCGAGCG CAA CGCCGACGGCAGCG CGGTAGGCGCCGTTG Smed_1413 1495349 - 1494057 - | hypothetical protein Smed_1414 1496215 - 1495463 - | GntR domain-containing protein TERM 1282 1495681 - 1495661 - G 71 -14 -2.59668 | overlap 1495651 1495660 GAAGACGCCGACAAG GGCGGCCT CGATC AGGCCGCC GACCGTGCGCAGGAA TERM 1283 1496427 - 1496393 - R 83 -14.3 -3.13177 | overlap 1496375 1496397 ACACCCCACAGGGAA TGCACAGACCCCGCG TCAAG CGCGGGGTCTGCAAA TCGTCAAGGTTCTAT TERM 1284 1496423 - 1496397 - R 95 -19.5 -2.56095 | overlap 1496393 CCCACAGGGAATGCA CAGACCCCGCG TCAAG CGCGGGGTCTG CAAATCGTCAAGGTT Smed_1415 1497540 - 1496470 - | basic membrane lipoprotein Smed_1416 1498501 - 1497581 - | inner-membrane translocator Smed_1417 1499595 - 1498501 - | inner-membrane translocator Smed_1418 1501219 - 1499585 - | ABC transporter related TERM 1285 1501010 - 1501041 + g 71 -8.7 -3.89614 | gap 1, overlap 1501013 GACCAATGTCGATTT TCC-CGCGCCGTTC TCGCC GAGCAGCGCGTGGA TTTCTCCGGGTTCGA TERM 1286 1501110 - 1501140 + g 73 -8.8 -4.02132 | opp_overlap 1501127, overlap 1501111 AACAATTTCGTAAGC TGGCGAACGGCCAG CAA CGGGCCGCTCGCGG TTTGTCCCTTTACAG Smed_1419 1502243 - 1501266 - | alcohol dehydrogenase TERM 1287 1502040 - 1502007 - G 76 -8.9 -4.18018 | gap 1, opp_overlap 1502028 GTCGCCGACCGAAAA CATGGTGACC-CCGTC GCC GACGGCGGTGACTATG CCGGCGCCTTCCTTG Smed_1420 1503003 - 1502278 - | phosphatidylcholine synthase TERM 1288 1503011 - 1502998 - G 73 -3.1 -4.74103 | TCTGTAATTGAAAAA CTTCA TCTG CGAAG CCGCCCTGTCCCTTG TERM 1289 1504516 - 1504531 + G 73 -6.8 -4.2828 | gap 1, overlap 1504482 CTTCTCGCCTCTGCG GGCC-CG CTG CGTGGCC TTTTGATGCGTGAGG Smed_1421 1503409 - 1504620 + | 2-octaprenyl-6-methoxyphenyl hydroxylase Smed_1422 1505550 - 1504588 - | auxin efflux carrier TERM 1290 1505013 - 1505003 - G 74 -4.6 -4.6468 | overlap 1505005 TCAAAGGATAGAAAA GCCG CAG CGAC GCCGGCGAAGGTCGA Smed_1423 1506323 - 1505580 - | cytochrome c biogenesis protein transmembrane region TERM 1291 1506152 - 1506137 - G 74 -4.6 -4.64676 | overlap 1506139 CGAGCGTGAACAAAA GCGCCG CCGG CAGCAC TGCCCTGCGCGTGCT TERM 1292 1506892 - 1506907 + H 78 -6.2 -4.70583 | GTTCTATTATTGCTG GTTGTA TTGG TACAAC TTTTCTATTAATGGC TERM 1293 1507479 - 1507517 + G 77 -13.1 -3.54424 | GTTCTGATCATGGAT GTCGAGGGTGCCGAGGA CGAGC TCCTCCGCATCCCCGGC TTTGGCAGCGTCCAA Smed_1424 1506918 - 1507964 + | FkbM family methyltransferase Smed_1425 1507976 - 1508239 + | hypothetical protein TERM 1294 1508330 - 1508351 + F 76 -4.4 -4.72986 | AAGCCTGTCGGTTGA CTCCCTTG GTTATG CAAAGGAG TTTTTCATGGCAGTC TERM 1295 1509148 - 1509137 - g 73 -3.6 -4.72272 | overlap 1509138 1509139 TGCGGGCATGAAAAA GCCG CCGG CAGC GTCGAAGAAGCGTAC TERM 1296 1509231 - 1509197 - g 86 -5 -5.13741 | gap 2, overlap 1509198 TGAAGGCAAGAAAAA GGCG--GCTGAGGAGG GCGCA CCTGCCCAGCGTCGCC GCGCAGGTTAAGAGA Smed_1426 1508358 - 1509242 + | Ku family containing protein Smed_1427 1509255 - 1510070 + | Ku family containing protein TERM 1297 1510410 - 1510386 - g 70 -7.7 -3.97356 | overlap 1510387 1510390 AAAGCAAAAGCGAAA TCCAGGCGACG GTC CGCCGCCTCGC GCCCTTCCATCACGC Smed_1428 1510331 - 1511188 + | methyltransferase type 12 Smed_1429 1511579 - 1511280 - | putative signal peptide protein Smed_1430 1511807 - 1512208 + | hypothetical protein TERM 1298 1512651 - 1512670 + F 100 -12.1 -5.24129 | AGCGGATGCGTGCCT GCCCCGC CATCGA GCGGGGC TTTTTTATCCCCCGA TERM 1299 1512816 - 1512796 - f 78 -14.1 -2.52623 | overlap 1512795 1512793 CGTTCGCGATAAGAT TGCAGCCAA ACC TTGGCTGCA GAGAGATCGCGAGGC Smed_1431 1513078 - 1513485 + | hypothetical protein TERM 1300 1513541 - 1513490 - f 76 -7 -4.44667 | opp_overlap 1513498, overlap 1513492 1513493 TCGTTCAATAAGAAA CACCGCGACTGCCGGCGGCGCC CGAATGTT GGCGCCGCCGGCGCTCTTGCCA TTGCGACCGGACCAC TERM 1301 1513539 - 1513492 - f 75 -9.6 -3.82963 | opp_overlap 1513498, overlap 1513490 1513493 GTTCAATAAGAAACA CCGCGACTGCCGGCGGCGCC CGAATGTT GGCGCCGCCGGCGCTCTTGC CATTGCGACCGGACC TERM 1302 1513538 - 1513493 - f 74 -13.1 -2.89055 | opp_overlap 1513498, overlap 1513492 1513490 TTCAATAAGAAACAC CGCGACTGCCGGCGGCGCC CGAATGTT GGCGCCGCCGGCGCTCTTG CCATTGCGACCGGAC TERM 1303 1513498 - 1513533 + F 89 -16.8 -3.09492 | opp_overlap 1513493 1513492 1513490 TAAGAAACACCGCGA CTGCCGGCGGCGCC CGAATGTT GGCGCCGCCGGCGC TCTTGCCATTGCGAC Smed_1432 1513720 - 1514034 + | hypothetical protein Smed_1433 1515116 - 1514091 - | AraC family transcriptional regulator TERM 1304 1515247 - 1515277 + H 90 -10.4 -4.66537 | gap 1, overlap 1515249 TCCGCGATCTTTCGG AAGGGCCGGCCGG GACGAG CCG-CCGGCCCTC TTTTCTCTTCACCCG TERM 1305 1515249 - 1515275 + H 91 -13 -3.94773 | gap 1, overlap 1515247 CGCGATCTTTCGGAA GGGCCGGCCGG GACGAG CCG-CCGGCCC TCTTTTCTCTTCACC TERM 1306 1515298 - 1515308 + H 77 -8.2 -4.40561 | overlap 1515289 TCTTCACCCGAGGGC CGCC GGG GGCG TTGTTTTTCGCAGAC Smed_1434 1515373 - 1516020 + | porin TERM 1307 1516046 - 1516061 + F 100 -11.8 -4.96848 | opp_overlap 1516046 CGTTTCGATCAAGAA CCCGGC AATT GCCGGG TTTTTCTGTGGAAGG TERM 1308 1516061 - 1516046 - f 81 -11.8 -3.71848 | opp_overlap 1516046 CGTTTCGATCAAGAA CCCGGC AATT GCCGGG TTTTTCTGTGGAAGG Smed_1435 1516243 - 1516506 + | putative signal peptide protein Smed_1436 1517406 - 1516552 - | hypothetical protein TERM 1309 1517237 - 1517220 - G 71 -12.7 -3.07816 | GCGTGACGTAGGCAA GCGGCTC GAAG GAGCCGC CCCGTACCTGGATTA Smed_1437 1518161 - 1517409 - | short-chain dehydrogenase/reductase SDR Smed_1438 1519807 - 1518158 - | acyl-CoA synthetase Smed_1439 1520973 - 1519804 - | acetyl-CoA acetyltransferase Smed_1440 1521818 - 1520970 - | regulatory protein IclR TERM 1310 1521663 - 1521642 - G 71 -13.7 -2.57132 | overlap 1521641 GTCCTGCTCCAGAAG GCCGGCCCT GATC AGGGCCAGC AGCAGGCGACGCACC Smed_1441 1522625 - 1521822 - | short-chain dehydrogenase/reductase SDR TERM 1311 1521955 - 1521914 - G 81 -7.4 -4.43477 | gap 3 CGGAGGCAAGGAAAA GCGCGGCAT-T-GGCGACGTC CCA GGCATCGCCCATATGCC-CGC TTGGGAGCGCCGCGT Smed_1442 1523736 - 1522726 - | TRAP dicarboxylate transporter, DctP subunit Smed_1443 1525653 - 1523785 - | TRAP C4-dicarboxylate transport system permease DctM subunit Smed_1444 1526132 - 1526383 + | hypothetical protein Smed_1445 1527008 - 1527313 + | hypothetical protein TERM 1312 1527594 - 1527618 + T 74 -2.1 -5.00616 | overlap 1527601 GGTACGATCTGTTAC CTAAGTCTCCG GTA TGGACATTTGG TTTTTTGGCGACCCC Smed_1447 1528036 - 1527731 - | ETC complex I subunit region Smed_1448 1528751 - 1528260 - | hypothetical protein TERM 1313 1528681 - 1528664 - G 86 -12.7 -4.05788 | CCTTGGCAAAGGAAA CCTCGGC CATG GCCGAGG CGACGAGCAGCGACA TERM 1314 1528720 - 1528706 - G 100 -8.5 -5.88565 | opp_overlap 1528706 GCGACAACAAAAAAA GCGCC GTGAG GGCGC TTCTTGCGGCTATAA Smed_1449 1529329 - 1528751 - | cold-shock DNA-binding domain-containing protein Smed_1450 1529526 - 1529966 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1315 1530248 - 1530282 + F 71 -12.9 -2.63252 | overlap 1530247 1530246 TATACTTGCCTGACC TTTCCCGTGGGGAGC CGAGC GCTCTCCGCGTGAAA ATGTTATTGCCGGGT Smed_1451 1530377 - 1531678 + | peptidase M15A TERM 1316 1531726 - 1531739 + T 70 -2.3 -4.82901 | overlap 1531727 GCGAATGAGATGTCG CGACC GGCC GGTCA TTTTTCTGGGAAAAA Smed_1452 1534480 - 1532678 - | single-stranded-DNA-specific exonuclease RecJ TERM 1317 1534190 - 1534174 - G 76 -5.8 -4.62471 | CGTAATCGCCAAAAA CCACGA TCTTC TCGCGG CGGCGTATCGCATCT Smed_1453 1535930 - 1534608 - | homoserine dehydrogenase TERM 1318 1534956 - 1534966 + g 76 -8.2 -4.13014 | overlap 1534950 CGGAACGTGCTGCGC GCCG GGG CGGC TTTTCGCGATATCCG Smed_1454 1537226 - 1536009 - | aminotransferase TERM 1319 1536624 - 1536638 + g 76 -8.6 -4.15044 | opp_overlap 1536626 GGCGAGGTCCGAGAG CACGAT GAT ATCGTG TTTCTTCGCAAAGGC TERM 1320 1537259 - 1537269 + r 77 -8.2 -4.26076 | CGCGCGGCTTTGCGA GCCC CTT GGGC TTTTGCTCGACATGC Smed_1455 1537656 - 1537351 - | hypothetical protein Smed_1456 1537766 - 1539601 + | poly(R)-hydroxyalkanoic acid synthase, class I Smed_1457 1539645 - 1540364 + | sugar fermentation stimulation protein A Smed_1458 1540394 - 1541233 + | methionine aminopeptidase radC 1541230 - 1542012 + | DNA repair protein RadC Smed_1460 1543219 - 1542215 - | Beta-lactamase Smed_1461 1543281 - 1544303 + | LysR family transcriptional regulator Smed_1462 1544468 - 1545976 + | soluble pyridine nucleotide transhydrogenase Smed_1463 1546490 - 1546098 - | FeS assembly scaffold SufA Smed_1464 1546974 - 1546594 - | FeS assembly SUF system protein Smed_1465 1548226 - 1546985 - | SufS subfamily cysteine desulfurase Smed_1466 1549516 - 1548239 - | FeS assembly protein SufD Smed_1467 1550294 - 1549539 - | FeS assembly ATPase SufC Smed_1468 1551872 - 1550403 - | cysteine desulfurase activator complex subunit SufB Smed_1469 1553235 - 1552027 - | aminotransferase class V TERM 1321 1553685 - 1553703 + G 75 -14.6 -2.71144 | CATCCGCGCTCGATT GGGTGCAG AGC CTGCACCC TGATTCGAAGAGCTG Smed_1470 1553414 - 1554091 + | hypothetical protein TERM 1322 1554143 - 1554112 - T 84 -15.2 -2.94322 | opp_overlap 1554112 1554117, overlap 1554109 1554115 ACGCCACGTAAATTA CAACCCGAGAATCG AGCT CGTTTCTCGGGCTG TTCCATATCTTCGGC TERM 1323 1554112 - 1554143 + T 79 -13 -3.19175 | opp_overlap 1554112 1554109 1554115, overlap 1554117 ACGCCACGTAAATTA CAACCCGAGAATCG AGCT CGTTTCTCGGGCTG TTCCATATCTTCGGC TERM 1324 1554140 - 1554115 - T 83 -13.3 -3.61609 | opp_overlap 1554112 1554117, overlap 1554112 1554109 CCACGTAAATTACAA CCCGAGAATCG AGCT CGTTTCTCGGG CTGTTCCATATCTTC Smed_1471 1555375 - 1554179 - | diguanylate cyclase TERM 1325 1554476 - 1554460 - G 73 -6.5 -4.25104 | overlap 1554467 1554468 CGCCGGGGAGGAAAA CGGCAAA CTC CTCGCCG CCCAGGCGTGCCGCC TERM 1326 1555280 - 1555290 + g 86 -8.2 -4.57569 | opp_overlap 1555257, overlap 1555277 CCAGGCGGCGGCCCG GCCG TGC CGGC TTTTTACCGCAATGA anmK 1556614 - 1555466 - | anhydro-N-acetylmuramic acid kinase Smed_1473 1556778 - 1558031 + | tyrosyl-tRNA synthetase Smed_1474 1561460 - 1558074 - | hypothetical protein TERM 1327 1560248 - 1560214 - G 100 -18.6 -3.59979 | opp_overlap 1560237, overlap 1560237 1560242 GTGTCGGACTCGAAA CGCCCGCTTGCCTTGG CAT CGAAGGCAAGCGGGGG CGCCTGCATGTCCTC TERM 1328 1560528 - 1560548 + g 70 -10.3 -3.5764 | GAGTGCCGGCTTCGT GCCATCCGC AGC GCGGGCGGC TTTGAGCGTCACATT Smed_1475 1561879 - 1562346 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1329 1563134 - 1563155 + G 81 -8 -4.431 | gap 1 CGACATTGCCCGCGC CGAGGCGGG GTTGA CCC-CCTCG TTTTATCGGTCAATG Smed_1476 1562364 - 1563191 + | hypothetical protein Smed_1477 1563333 - 1564661 + | peptidase M23B TERM 1330 1566030 - 1566011 - g 78 -12.2 -3.68619 | overlap 1566020 CCGAACCGATGGAAA GTCACGAC AGCC GTCGTGAC CGCGGCAGCGACGGG Smed_1478 1564858 - 1566357 + | DEAD/DEAH box helicase domain-containing protein Smed_1479 1566368 - 1566775 + | NUDIX hydrolase Smed_1480 1567140 - 1566823 - | TfoX domain-containing protein Smed_1481 1568760 - 1567144 - | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase Smed_1482 1569464 - 1568757 - | xanthine dehydrogenase accessory factor TERM 1331 1569149 - 1569124 - G 70 -10.3 -3.65902 | TCGACGCCATGGAAA CGCTCGGCCGT TGCA AAGGCCGTGCG CGGGTCGATGACCGC Smed_1483 1569800 - 1569468 - | hypothetical protein Smed_1484 1571146 - 1569857 - | VWA containing CoxE family protein TERM 1332 1570396 - 1570355 - G 100 -13 -4.64861 | overlap 1570356 1570357 CGTTCCGAAAAGAAA CGTCTGCACACGCTGCCG CTGTTC CGTCAGCGCGTGCAGAAA ATGCAGGAATATTTT TERM 1333 1570395 - 1570356 - G 82 -14.3 -3.38435 | overlap 1570355 1570357 GTTCCGAAAAGAAAC GTCTGCACACGCTGCCG CTGTTC CGTCAGCGCGTGCAGAA AATGCAGGAATATTT TERM 1334 1570394 - 1570357 - G 86 -17.8 -2.62579 | overlap 1570356 1570355 TTCCGAAAAGAAACG TCTGCACACGCTGCCG CTGTTC CGTCAGCGCGTGCAGA AAATGCAGGAATATT Smed_1485 1572081 - 1571152 - | ATPase TERM 1335 1571681 - 1571667 - G 100 -9.2 -4.9218 | opp_overlap 1571672 1571673 CATCGATCAGAAAAA CCGGCG CGC CACCGG CGGTTGTCGATATCG Smed_1486 1572605 - 1572105 - | flavin reductase domain-containing protein TERM 1336 1573122 - 1573076 - g 70 -10.2 -3.64703 | gap 3 TTCTTTGCACCGAAA GTCTGGAA-GCCGCGCTGCCGGC GCTC GCCGG-AGC-CGGCATTCCGGCC ATTACCGTCAGCGTC Smed_1487 1572796 - 1573884 + | extracellular ligand-binding receptor TERM 1337 1574809 - 1574829 + G 76 -10.4 -3.86897 | gap 1, overlap 1574809 CCGCCGCCACTATGG C-CCGCGCG ATCG CGCGCGGCG TTTATGACGCATGCG Smed_1488 1573881 - 1574888 + | peptidase S58 DmpA Smed_1489 1575045 - 1575725 + | ribulose-phosphate 3-epimerase TERM 1338 1576206 - 1576191 - g 74 -4.7 -4.66938 | AGCTCGAAGAGAAAA CCTTC GAGCCG GAAGG GATCTGCAAGGAATT Smed_1490 1575722 - 1576477 + | hypothetical protein Smed_1491 1576477 - 1577034 + | hypothetical protein Smed_1492 1577099 - 1578406 + | adenylosuccinate lyase TERM 1339 1578427 - 1578472 + F 88 -14.9 -3.6003 | gap 1, overlap 1578429 1578430 TCTGTTTTAGCGCTG GTTTTCGCCCGCATCTG-ACAT CCG ATGTTCAAATGCGGGCGAAGTC TTTAGCAGTCCTTTA TERM 1340 1578429 - 1578470 + F 89 -16.1 -3.37259 | gap 1, overlap 1578427 1578430 TGTTTTAGCGCTGGT TTTCGCCCGCATCTG-ACAT CCG ATGTTCAAATGCGGGCGAAG TCTTTAGCAGTCCTT TERM 1341 1578430 - 1578469 + F 87 -17.4 -2.61873 | gap 1, overlap 1578429 1578427 GTTTTAGCGCTGGTT TTCGCCCGCATCTG-ACAT CCG ATGTTCAAATGCGGGCGAA GTCTTTAGCAGTCCT TERM 1342 1578575 - 1578553 - g 70 -7.6 -3.9941 | TGGTTTACAAGGAAA GCGTTCAGCG GGC CGCTCCACGC GAGCGGACCAGGATA Smed_1493 1578537 - 1578842 + | type IV pilus assembly PilZ Smed_1494 1579721 - 1578912 - | hypothetical protein TERM 1343 1579801 - 1579781 - H 89 -6.7 -5.06414 | GCGGCGTAACAAAAA GGCCGCTGC CGA ACCGCGACC GTAAAGGCGATTATA Smed_1495 1579878 - 1580438 + | hypothetical protein Smed_1497 1581006 - 1580692 - | hypothetical protein TERM 1344 1581371 - 1581351 - g 74 -5.3 -4.57882 | overlap 1581353 1581356 TTCAACAAGAAGAAA CATGACGTC ATC GACGGCAAG GGCGTGCTCAACAAC TERM 1345 1581977 - 1581959 - g 95 -10.2 -4.46615 | CATCATCAACGAAAA CGAGCCGC CGC GCGGTTCG GGTCCGGTGCTGGTC Smed_1498 1581234 - 1581998 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Smed_1499 1582017 - 1582259 + | phosphoribosylformylglycinamidine synthase subunit PurS Smed_1500 1582340 - 1583011 + | phosphoribosylformylglycinamidine synthase subunit I Smed_1501 1583137 - 1583544 + | hypothetical protein Smed_1502 1583886 - 1583644 - | hypothetical protein TERM 1346 1583760 - 1583733 - G 70 -12 -3.16564 | gap 1, opp_overlap 1583741 TGCTCAGTTCATCAA GC-GCCAGACGGC TGC GCCGTTTGGCAGC CAAGGCGCAGTAAAA TERM 1347 1584388 - 1584406 + G 73 -8.8 -4.08692 | AGCATCATCGGGACA TTGCGAGC TAT GCCCGCAA TTTTCCAGAGCATTG TERM 1348 1584842 - 1584871 + G 73 -2.8 -4.77165 | overlap 1584842 1584843 CGGAGACCCGCTTCC G-CTGCTCGTGGAG CTTG CGCC-CGAGCGGAC TTTTCTTGTCGGCGG Smed_1503 1583967 - 1585385 + | GntR family transcriptional regulator Smed_1504 1585481 - 1586068 + | hypothetical protein Smed_1505 1586239 - 1588470 + | phosphoribosylformylglycinamidine synthase II TERM 1349 1588494 - 1588471 - f 74 -13.8 -2.59431 | opp_overlap 1588466, overlap 1588467 GCGCCGGACAATTGA TCCGCCGACC GGGC GGACGGCGGA AACAGCATTTGCGTT Smed_1506 1588595 - 1588828 + | BolA family protein TERM 1350 1588964 - 1588949 - g 82 -3.2 -5.19879 | opp_overlap 1588954 GGCGAAACAGAAAAA CCGC ATCCGACG GCGG CATACTGGCGGATAT Smed_1507 1588834 - 1589076 + | hypothetical protein TERM 1351 1589068 - 1589053 - f 71 -6.8 -4.15044 | overlap 1589054 GCCTCCCGGAATAAA CTGCGC CGCC GCGCAA AGTCGTAATCGCGTT TERM 1352 1589280 - 1589293 + G 73 -6.7 -4.25104 | opp_overlap 1589277 1589279, overlap 1589277 CGCCGAAGTCAAGAC GAACG ACGT CGTTC TTTTCATGAAGGGAA Smed_1508 1589239 - 1589574 + | glutaredoxin-like protein TERM 1353 1589621 - 1589634 + F 100 -9.5 -5.26875 | opp_overlap 1589621 GCGTTTATCGGAAAA GGCGG GTAA CCGCC TTTTTTGATTCCCAA TERM 1354 1589634 - 1589621 - f 80 -9.5 -4.13767 | opp_overlap 1589621 GCGTTTATCGGAAAA GGCGG GTAA CCGCC TTTTTTGATTCCCAA TERM 1355 1589904 - 1589880 - f 87 -12.8 -3.9122 | CAGCGCGGCAAAGAA CCGGCTGCGG GCAAG CTGCAGCCGG CAGGATGTATGAAAT TERM 1356 1590766 - 1590797 + G 72 -12.3 -3.36492 | overlap 1590751 GCGCCTCGTGCGGAC GTTCGGCATGCGG GCATTG TCGCATGCCGCAC TTCTCGGCTTCACGC Smed_1509 1589918 - 1591156 + | Bcr/CflA subfamily drug resistance transporter TERM 1357 1592194 - 1592206 + G 80 -4.8 -4.91977 | TCCGGCTTTCACCAT CAGC TACCT GCTG TTTTCTCTTTTGCTG Smed_1510 1591199 - 1592512 + | major facilitator transporter TERM 1358 1592545 - 1592518 - T 100 -17 -3.73224 | opp_overlap 1592521 1592533, overlap 1592521 CCATTTGTGACGAAA GAACCCGCCCGG CAAT CGGGGCGGGTTC CATCTCGCCGGCGAT TERM 1359 1592542 - 1592521 - T 91 -12.9 -4.00042 | opp_overlap 1592521 1592533, overlap 1592518 TTTGTGACGAAAGAA CCCGCCCGG CAAT CGGGGCGGG TTCCATCTCGCCGGC TERM 1360 1592521 - 1592542 + T 76 -12.9 -3.12351 | opp_overlap 1592521 1592518, overlap 1592533 TTTGTGACGAAAGAA CCCGCCCGG CAAT CGGGGCGGG TTCCATCTCGCCGGC Smed_1511 1593394 - 1592570 - | inositol monophosphatase Smed_1512 1594278 - 1593397 - | PP-loop domain-containing protein TERM 1361 1594230 - 1594247 + g 74 -9.1 -3.90588 | opp_overlap 1594195 1594194, overlap 1594195 AGACGGCCTCTTCGC CGGCGGA GATC TCCGTCG TTTCGTTCAAGGATG TERM 1362 1594429 - 1594373 - R 78 -3.7 -4.92777 | gap 3, overlap 1594375 1594377 1594378 AAGATCAAGGAAAAA CAGACCGT--GGGCGGCCAA-CGACCGC TGAG GCCGCCGATCAACCGCACTTACGGTCCG AACACCGACCAGCCA Smed_1513 1595367 - 1594420 - | glutaminase TERM 1363 1595436 - 1595419 - R 100 -14.1 -5.60993 | opp_overlap 1595419 CTTCCTACAAAAAAA CCGCCCG TTTC CGGGCGG TTTTAAACTCGTCAG TERM 1364 1595419 - 1595436 + r 100 -14.1 -4.15565 | opp_overlap 1595419 CTTCCTACAAAAAAA CCGCCCG TTTC CGGGCGG TTTTAAACTCGTCAG rpsD 1596080 - 1595463 - | 30S ribosomal protein S4 TERM 1365 1596243 - 1596222 - R 80 -10.1 -4.07647 | opp_overlap 1596237 ACATGTCAAATGAAA CACCGGACA TTGC TGCCCGGCG TTGAGCGGGTCTTTA Smed_1515 1597847 - 1596333 - | AAA ATPase TERM 1366 1596726 - 1596708 - G 78 -11.7 -3.72893 | CATTTTGCGACGAAA CGCGCTC AAGGA GAGCGCG GGTCCGGGAACGCGG Smed_1516 1598791 - 1597976 - | glutamate racemase TERM 1367 1598627 - 1598614 - G 79 -9.5 -4.21275 | opp_overlap 1598614 GCAACCGACCGAAAA GCGCG ATCA CGCGC TCCTTCAAGGCGCCC Smed_1517 1599608 - 1598778 - | RNA methyltransferase Smed_1518 1601659 - 1599659 - | hypothetical protein TERM 1368 1601217 - 1601191 - G 70 -10.1 -3.60627 | gap 1 CGACGGCAGCCGAAA TTCCGGCGC-CG AGAA CGAGCGCCGGCA ACTGGTCGAGAGACG Smed_1519 1601963 - 1603177 + | isocitrate dehydrogenase TERM 1369 1603202 - 1603226 + T 100 -15.8 -4.62069 | opp_overlap 1603206, overlap 1603206 CATCGCCGATATTCG GAAACCCGGC CTTGC GCCGGGTTTC TTTTTGGCCTGGGCC TERM 1370 1603222 - 1603206 - T 71 -10.8 -3.59262 | opp_overlap 1603202 1603206 GCCGATATTCGGAAA CCCGGC CTTGC GCCGGG TTTCTTTTTGGCCTG TERM 1371 1603206 - 1603222 + T 100 -10.8 -4.87389 | opp_overlap 1603206, overlap 1603202 GCCGATATTCGGAAA CCCGGC CTTGC GCCGGG TTTCTTTTTGGCCTG alaS 1606683 - 1604020 - | alanyl-tRNA synthetase TERM 1372 1606236 - 1606258 + g 78 -7 -4.56597 | CAATGCGGATGATGC GATCGTCG CTCAAGC CGGCGATC TTTTTCCACAGGCCG TERM 1373 1606850 - 1606869 + r 87 -15 -3.39595 | opp_overlap 1606850 GCGGCCATCAAAAAA CCGGCCGT GACG ACGGCCGG TTCTGGATGCTTCAG TERM 1374 1606869 - 1606850 - R 100 -15 -5.14563 | opp_overlap 1606850 GCGGCCATCAAAAAA CCGGCCGT GACG ACGGCCGG TTCTGGATGCTTCAG recA 1607987 - 1606902 - | recombinase A TERM 1375 1608030 - 1608040 + H 74 -2.4 -4.92363 | TCGAGGCAATGAAGC CGCC GCA GACG TTTTTGTACATGTTT TERM 1376 1608969 - 1608991 + H 75 -11.9 -3.28712 | GCCCTTGCTGCTGCG CTCCGCCGG CCTCT CCGGCGGCG TTGTGACACGCGGAA TERM 1377 1609101 - 1609111 + H 70 -4.6 -4.52589 | overlap 1609084 GGCGCCGGCGACGCG CTCG CCT CGGG TTTTCTCTCCGCCCG TERM 1378 1609764 - 1609796 + G 73 -8.4 -4.07568 | gap 1, opp_overlap 1609767 CGACAGTTGCCGCAA CCATGATCGCCGCCG CCCG CGCCGGC-ATCAGGG TTTTCGCCACAGGCG Smed_1524 1609421 - 1610350 + | indigoidine synthase A family protein TERM 1379 1610397 - 1610367 - T 70 -11.9 -2.73159 | overlap 1610366 GCAAGGGGCGGAAAT CGTACCTCATCCG CCTGC CGGATGAGGGACA CTCGCACGCATCAGT Smed_1525 1613060 - 1610442 - | multi-sensor hybrid histidine kinase TERM 1380 1613326 - 1613309 - H 76 -3.3 -4.9181 | opp_overlap 1613312 AGATAACAGCAAAAA GCGTCTC GGCG GAAGCGC TGCGGTCAATTCACA TERM 1381 1613792 - 1613760 - g 78 -6.8 -4.65747 | GAAGCCGGAAGAAAA GGCCGCCCCTGCGC CGATC GCGGAAGCCCGGCC CCAATCCGTTTCTTC Smed_1526 1613425 - 1614417 + | putative CheA signal transduction histidine kinase TERM 1382 1614525 - 1614493 - T 100 -17.2 -4.28791 | gap 1, opp_overlap 1614499, overlap 1614494 1614499 AATGCATAACATAAA TGGAAACGGCGCGGA TCGA TCCGCGCCGTTTC-A GTATCACATGATGTC TERM 1383 1614525 - 1614494 - T 100 -18.8 -3.1619 | opp_overlap 1614499, overlap 1614493 1614499 ATGCATAACATAAAT GGAAACGGCGCGGA TCGA TCCGCGCCGTTTCA GTATCACATGATGTC TERM 1384 1614499 - 1614520 + T 100 -17.3 -3.71378 | opp_overlap 1614493 1614494 1614499 TAACATAAATGGAAA CGGCGCGGA TCGA TCCGCGCCG TTTCAGTATCACATG TERM 1385 1614520 - 1614499 - T 100 -17.3 -3.93009 | opp_overlap 1614499, overlap 1614493 1614494 TAACATAAATGGAAA CGGCGCGGA TCGA TCCGCGCCG TTTCAGTATCACATG Smed_1527 1614964 - 1614545 - | TraR/DksA family transcriptional regulator TERM 1386 1614940 - 1614915 - G 71 -4.7 -4.42386 | gap 1, overlap 1614916 TTTGCATTCATAAAA TCCT-CGTCCTC TGA AAGGACGTAGGT ACTAAGATCGATCTT Smed_1528 1615370 - 1615909 + | putative phosphohistidine phosphatase, SixA TERM 1387 1616438 - 1616456 + G 73 -6.7 -4.36914 | gap 1, opp_overlap 1616434, overlap 1616440 CGACTACGAGAGCGC CAG-CGGC TGGA GCCGCCTG TTTTCTCCCGGACGG TERM 1388 1616756 - 1616784 + G 73 -13.2 -3.23274 | gap 1 GGGCCGGTTCCTCAT GC-CCGGCGATCT CGAA GGATCGCCGGCGC TTACCTTCTCACCGC Smed_1529 1616076 - 1617575 + | protein of unknown function DUF463 YcjX family protein TERM 1389 1618121 - 1618111 - g 71 -8.2 -3.83026 | overlap 1618112 TCCCCGGACAGCAAA GGGC CGC GCCC GCCTGGCGGATACCG Smed_1530 1617572 - 1618657 + | hypothetical protein Smed_1531 1618777 - 1619328 + | putative signal peptide protein Smed_1532 1619902 - 1619378 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1390 1619499 - 1619527 + g 70 -13.2 -2.82834 | opp_overlap 1619503, overlap 1619502 TCTGCCGCGAAGTCG GAAAGCGGCTTC AACAC GAAGCCGCGTTC TGTCATCCTCGGGTG TERM 1391 1619523 - 1619503 - G 77 -13.3 -3.60792 | opp_overlap 1619502 1619499 CCGCGAAGTCGGAAA GCGGCTTCA ACA CGAAGCCGC GTTCTGTCATCCTCG Smed_1533 1620260 - 1619889 - | dihydroneopterin aldolase Smed_1534 1621126 - 1620257 - | dihydropteroate synthase TERM 1392 1621516 - 1621492 - g 73 -6.3 -4.30576 | GCCCGATGATGAAAA GCACCGGTACG CGA CATCCGGGTGC GACCCGGATAAAGTT Smed_1535 1621269 - 1621949 + | hypothetical protein TERM 1393 1622348 - 1622375 + T 100 -13.4 -5.75342 | CGATACGCCCTCCTA GCCTCGCTTGTC GATC GACCGGCGAGGC TTTTTTTTGCCCGCA Smed_1536 1622806 - 1622486 - | ferredoxin TERM 1394 1622851 - 1622834 - R 80 -2.5 -5.1848 | overlap 1622836 AACGAATTGAAAAAA GGGCCGG CCGG CTGGCAC ATGGCTTTATTCGGT TERM 1395 1622869 - 1622882 + r 72 -9.5 -3.75153 | overlap 1622873 GGCTTTATTCGGTTA GCCGG TGCC CCGGC TTTGAATTCAGGGCA TERM 1396 1623057 - 1623091 + r 71 -12.7 -2.52464 | opp_overlap 1623052 1623060 GTGCATGACACTGAT GAAGCGCGCCGCTTC GATCG GATGCGGCGCGCAGC TGCGTTACCGGCAGA TERM 1397 1623088 - 1623060 - R 93 -17.4 -3.20858 | opp_overlap 1623057, overlap 1623052 CATGACACTGATGAA GCGCGCCGCTTC GATCG GATGCGGCGCGC AGCTGCGTTACCGGC Smed_1537 1623464 - 1623096 - | Hpt domain-containing protein TERM 1398 1625835 - 1625799 - g 100 -16.7 -4.1899 | gap 1, overlap 1625800 GGACCGCATCGAAAA CGGCTTCGGCAAGCGC GCAGAT GCGCTCGCCGAAG-CG CTGACGACAAGCGAG TERM 1399 1625835 - 1625800 - g 88 -16.9 -3.11073 | overlap 1625799 GACCGCATCGAAAAC GGCTTCGGCAAGCGC GCAGAT GCGCTCGCCGAAGCG CTGACGACAAGCGAG TERM 1400 1628028 - 1627994 - g 76 -11.5 -3.73224 | gap 2, opp_overlap 1627979 1628010 GCACGCTGGACGAAA GCACCC-GCGAGC-TCA ATT CGATGCTCGCCGGGCGC TCGATCGAACTTTCG TERM 1401 1629394 - 1629375 - g 77 -12.8 -3.54511 | overlap 1629364 AGAAGCCAAGGAGAA CGCGGCAC TGAT GCGCCGCG CCGTCGGCGAGCAGA Smed_1538 1623967 - 1630125 + | chemotaxis sensory transducer TERM 1402 1630158 - 1630181 + T 100 -16 -4.25104 | TATCTGTCTCCTGAA CGGCCTCGTC GCAA GACGGGGCCG TTTTGGTAACGGGCG Smed_1539 1631648 - 1630779 - | cytochrome c1 TERM 1403 1631628 - 1631640 + g 78 -3.3 -5.01845 | opp_overlap 1631628 AGCGAGTGACAGAAT GCCTG TAA CAAGC TTTTTCATTGTTGTG Smed_1540 1632960 - 1631680 - | cytochrome b/b6 domain-containing protein Smed_1541 1633553 - 1632975 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 1404 1633727 - 1633716 - R 83 -4.4 -5.03145 | GAATCCGGGAAAAAA TCTG CACG CAGA TTCCCCATCAATCCG TERM 1405 1633856 - 1633882 + r 76 -13 -3.13403 | overlap 1633855 GACGCATTACGGCTG TGCCGCGGAGTA CCC TATTCCGCGGCC TCTTCCTGAGCGAGG Smed_1542 1635735 - 1633870 - | ABC transporter related TERM 1406 1634910 - 1634892 - G 91 -12.4 -4.37886 | TCAGGCCCGACAAAA GTGCGAGC GAG GCCCGCAC CGCCGTCAGCAGGCG TERM 1407 1635321 - 1635305 - G 72 -3.7 -4.56775 | overlap 1635320 ATGCGCCCGGAAAAA TCGTTCT GAA AGAAGGA CAACGATTGCCGAGC TERM 1408 1635838 - 1635869 + r 93 -11.4 -4.60487 | overlap 1635840 AGAGCCATCAGCGGT GCGGAGGCGACGGA TTAC TCCGCCGCCGCCTC TTTTTCGACCTCGTC TERM 1409 1635840 - 1635867 + r 87 -12.6 -3.91506 | overlap 1635838 AGCCATCAGCGGTGC GGAGGCGACGGA TTAC TCCGCCGCCGCC TCTTTTTCGACCTCG Smed_1543 1637705 - 1635852 - | ABC transporter related TERM 1410 1637655 - 1637636 - G 83 -6.4 -4.88222 | overlap 1637639 AGCAAAAGGCAAAAA GACCCTTC GGCG GAAGCGTC GGCTCCTCCGTCGGA TERM 1411 1637733 - 1637754 + H 85 -10.1 -4.32857 | opp_overlap 1637736 1637737 TCAGATATTTTGAAG GAAGGCGGG TCGC CCCGCATTC TTTATCTTTGAAAAA Smed_1544 1638184 - 1638645 + | tRNA/rRNA methyltransferase (SpoU) Smed_1545 1639312 - 1638701 - | NADPH-dependent FMN reductase TERM 1412 1638887 - 1638865 - G 91 -9 -4.41348 | overlap 1638866 CCTTGGCGAAAGAAA TGCCGTCGCG CAG CGTGACGGCG TGCAACTCCCCGAAA TERM 1413 1638886 - 1638866 - G 73 -12.5 -3.24488 | overlap 1638865 CTTGGCGAAAGAAAT GCCGTCGCG CAG CGTGACGGC GTGCAACTCCCCGAA TERM 1414 1639231 - 1639221 - G 71 -8.2 -3.85817 | overlap 1639195 ACCGTGTCGCAGAAA CGGC CCT GCCG CGCGCTGCCATAGAT Smed_1546 1639352 - 1639837 + | MerR family transcriptional regulator Smed_1547 1641026 - 1639842 - | major facilitator transporter TERM 1415 1639981 - 1639968 - G 74 -9.5 -3.90241 | overlap 1639965 CAGGAAGGAGAAGAA CGGCG GGGC CGCCG CGAAAGCGAGGTTGA TERM 1416 1640761 - 1640744 - G 79 -9.1 -4.13748 | gap 1 CTGAAAAATAGGAAA CCGG-GCC TTC GGCGCCGG CAAGCAACCACAGCC Smed_1548 1641433 - 1641173 - | hypothetical protein Smed_1549 1641637 - 1642548 + | coproporphyrinogen III oxidase TERM 1417 1642660 - 1642648 - g 78 -3.4 -5.03715 | overlap 1642655 ATGATCTTTAAAAAA CGAA CATTC TTCG GCGATGAGCCCCAGA Smed_1550 1642633 - 1642911 + | transport-associated Smed_1551 1643699 - 1643085 - | hypothetical protein Smed_1552 1645155 - 1643779 - | hypothetical protein TERM 1418 1643832 - 1643842 + g 74 -2.4 -4.87786 | opp_overlap 1643832 CGCCGCCGAACAAAA GCCG TTG CGGA TTTTTATCGAATTCG Smed_1553 1646048 - 1645242 - | ABC transporter related TERM 1419 1645779 - 1645730 - G 85 -10 -4.37886 | gap 2, opp_overlap 1645755 1645757, overlap 1645749 1645751 1645752 TCAGGGCGGAGAAAA GCGCGCCGTGCTGGAACAACACGC CGAG GCGCAT-G-TCGAGCGCGACGCGC TCGGCCTCCCCCATC Smed_1554 1647198 - 1646059 - | hypothetical protein TERM 1420 1647148 - 1647128 - G 74 -10.4 -3.68024 | gap 1, opp_overlap 1647128 1647132 CCGCTGAACACATAA CGCCGACCG TTTC CGG-CGGCG CCCTCATCGACGACG TERM 1421 1647132 - 1647178 + g 80 -15 -3.24232 | opp_overlap 1647128, overlap 1647128 TGAACACATAACGCC GACCGTTTCCGGCGGCGCCCTC ATC GACGACGACGTCGGCAGCGGTC TCTGTTTGGGCAGGC TERM 1422 1648322 - 1648335 + G 72 -3.8 -4.56597 | overlap 1648308 CCCCGGCCTGCGCTA CGAG GCCTCG CTCG TTTTTCCGGCGGAAG Smed_1555 1647384 - 1648367 + | mandelate racemase/muconate lactonizing protein Smed_1556 1649542 - 1648319 - | major facilitator transporter TERM 1423 1648648 - 1648635 - G 72 -3.8 -4.62904 | overlap 1648626 AAATAGCCCGAAAAA CCGA GATCCA TCGG GAAGATCAGCCAGCG TERM 1424 1649711 - 1649676 - R 79 -12.6 -3.28712 | gap 1, opp_overlap 1649701, overlap 1649677 TTTCGTCTTGGAGAA CCGGTTATGCGGCTTGC GGT GCGAGCCGCGTAAC-GG CCTCGGAGGCTCGCT TERM 1425 1649711 - 1649677 - R 71 -12.8 -2.57132 | opp_overlap 1649701, overlap 1649676 TTCGTCTTGGAGAAC CGGTTATGCGGCTTGC GGT GCGAGCCGCGTAACGG CCTCGGAGGCTCGCT Smed_1557 1650513 - 1649680 - | metallophosphoesterase TERM 1426 1651897 - 1651911 + G 86 -12.8 -4.08064 | opp_overlap 1651906 1651907 CCGCCCGCGCCTATT CCGGCG AAA CGCCGG TTTTCGGCCCCGATT TERM 1427 1652171 - 1652114 - g 86 -15.8 -3.67597 | gap 3, opp_overlap 1652086 1652125, overlap 1652090 1652115 1652126 1652153 CGCCGCAGCGAAGAA TGCGTCG-AAGAACCGCGTCATCTTCGCC GAG GGCGAAGACGA-GCGGGTCTTGCG-CGCC GCCCAGGTGCTGCTG TERM 1428 1652170 - 1652115 - g 87 -19.3 -2.80344 | gap 3, opp_overlap 1652086 1652125, overlap 1652090 1652114 1652126 1652153 GCCGCAGCGAAGAAT GCGTCG-AAGAACCGCGTCATCTTCGCC GAG GGCGAAGACGA-GCGGGTCTTGCG-CGC CGCCCAGGTGCTGCT TERM 1429 1652125 - 1652160 + G 71 -12.6 -3.01712 | gap 1, opp_overlap 1652115 1652114 1652126 1652153, overlap 1652086 AGAATGCGTCGAAGA ACCGCGTCATCTTCGCC GAG GGCGAAGACGA-GCGGG TCTTGCGCGCCGCCC TERM 1430 1652159 - 1652126 - g 100 -18.3 -3.62522 | gap 1, opp_overlap 1652086 1652125, overlap 1652115 1652114 1652153 GAATGCGTCGAAGAA CCGCGTCATCTTCGCC GAG GGCGAAGACGA-GCGG GTCTTGCGCGCCGCC Smed_1558 1650759 - 1653071 + | malic enzyme Smed_1559 1653276 - 1654016 + | regulatory protein LuxR TERM 1431 1654107 - 1654092 - f 72 -4.7 -4.59993 | opp_overlap 1654092 AAATGTAGAAATAAA CTGTC ACTATA GACAG TTACATGTGTCGTGA Smed_1560 1654170 - 1654814 + | autoinducer synthesis protein TERM 1432 1655933 - 1655917 - g 83 -9.3 -4.25104 | TGCCGTTGATCAAAA GTCCGGC TCC GCCGGCC GGCTCACCGTTGTCA Smed_1561 1655000 - 1656133 + | putative signal peptide protein Smed_1562 1656943 - 1656248 - | cob(II)yrinic acid a,c-diamide reductase TERM 1433 1657073 - 1657098 + r 72 -4.7 -4.56597 | opp_overlap 1657064 1657076, overlap 1657075 1657076 TTAAAATTCAGTGGC AAAGCTCTGAA AAGA TTCAGAGCCTG TTTTTGGCGAGAACG TERM 1434 1657095 - 1657076 - R 71 -10.8 -3.58536 | opp_overlap 1657075 1657073 1657076, overlap 1657064 AAATTCAGTGGCAAA GCTCTGAA AAGA TTCAGAGC CTGTTTTTGGCGAGA TERM 1435 1657216 - 1657177 - R 72 -5.7 -4.52589 | gap 1 TTCTCCCACATAAAA GCGGGCACCTGACGGC TGTCATATG GCCA-CAGGTACCAGC GAAACGCAAGGCGGC Smed_1563 1658063 - 1657242 - | short chain dehydrogenase TERM 1436 1657527 - 1657539 + g 72 -2.6 -4.73388 | overlap 1657498 CCGGTTGCGCAGGAC CGCG TAGGC CGTG TTTTTGGTCAGGGTT Smed_1564 1659939 - 1658206 - | ankyrin TERM 1437 1659265 - 1659298 + g 85 -14.5 -3.55444 | opp_overlap 1659253 1659255 1659252 AAGCAGCCGGGCGAA GGCACGGCGGTCGGG ATGC TCCGGCTGCCGTTCC TTTCCCGCCTCGCCC nadE 1662614 - 1660932 - | NAD synthetase TERM 1438 1662508 - 1662471 - G 73 -11.3 -3.55548 | gap 2, opp_overlap 1662504 1662505, overlap 1662461 GAAGAGCTCGGTAAA GAGCAGCAGGTCGGCGC CCTCGC GCGCCG-CC-GCCGCCC GCGCCTCGCGCGCCT TERM 1439 1662753 - 1662720 - H 100 -9.6 -4.93365 | opp_overlap 1662735 TTTCAGAAGGAAAAA TCCGAAAAGATCCG CGATTT CGGACCCTTACGGA AATCTTTCACGGCTC TERM 1440 1664508 - 1664496 - g 81 -7.7 -4.40963 | overlap 1664493 AGGTCCGAAAAAGAA GATCG GCA CGATC AGCCCGGCCTTTCTT Smed_1567 1662853 - 1664790 + | sulfatase TERM 1441 1665370 - 1665340 - g 70 -11.8 -3.15663 | overlap 1665359 AGGCAGGCGCACGAA CGCTGATAGCGGTC AAT GACCTCTACCCGCG CGTAGCGCGCCTGGT Smed_1568 1665165 - 1666127 + | hypothetical protein Smed_1569 1666600 - 1666193 - | glutathione-dependent formaldehyde-activating GFA TERM 1442 1666531 - 1666548 + g 73 -8.3 -4.07568 | opp_overlap 1666525 1666523 GGCAGAAGATCACTT CGCGCAG CCTG CCGCGCG TTTTGAACCGCACCG TERM 1443 1666736 - 1666707 - R 100 -23.7 -4.19238 | opp_overlap 1666707 GCCCGAACGTGAAAA GGCCGGACCAGCT TTCA AGCTGGTCCGGCC TTTGTCAAATTCAGA TERM 1444 1666707 - 1666736 + r 100 -23.7 -3.92522 | opp_overlap 1666707 GCCCGAACGTGAAAA GGCCGGACCAGCT TTCA AGCTGGTCCGGCC TTTGTCAAATTCAGA Smed_1570 1668173 - 1666800 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1445 1668389 - 1668376 - R 70 -4.5 -4.46926 | overlap 1668359 1668377 CATCCTACCAGAAAA CGTGG ACGG CCACA GCACCGGCGGAAAGA Smed_1571 1669798 - 1668407 - | glutathione reductase TERM 1446 1669913 - 1669941 + r 72 -9.6 -3.6682 | gap 1, opp_overlap 1669913 1669918, overlap 1669913 1669916 TGCAACGCAAAAAAA GG-AAAGCCCGGA TCGC TCCGGGCTCTGCC TTTAGGTCGATGCGG TERM 1447 1669940 - 1669913 - R 100 -12 -5.53288 | opp_overlap 1669913 1669913 1669916, overlap 1669918 TGCAACGCAAAAAAA GGAAAGCCCGGA TCGC TCCGGGCTCTGC CTTTAGGTCGATGCG TERM 1448 1669935 - 1669918 - R 100 -12.7 -4.5187 | opp_overlap 1669916 1669913 1669913, overlap 1669913 CGCAAAAAAAGGAAA GCCCGGA TCGC TCCGGGC TCTGCCTTTAGGTCG Smed_1572 1670519 - 1669977 - | hypothetical protein Smed_1573 1671326 - 1670631 - | ribose-5-phosphate isomerase A Smed_1574 1671545 - 1672228 + | phosphoglycolate phosphatase Smed_1575 1674157 - 1672262 - | hypothetical protein fumC 1674597 - 1676045 + | fumarate hydratase TERM 1449 1676091 - 1676055 - T 100 -23 -2.88999 | gap 1, opp_overlap 1676048 GCCTGACAGACCACA GGCGGCCGCGGCTGGGC ATAT GGCC-GCCGCGGCCGCC TACCACATCGTCTTC Smed_1577 1676699 - 1676091 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 1450 1676787 - 1676800 + r 70 -3.7 -4.62069 | overlap 1676779 1676788 1676797 CATGACGGTCTGATG ACGCC ATCA GGCGA TTTTTGACATGGGAA Smed_1578 1677710 - 1676793 - | hypothetical protein Smed_1579 1677725 - 1678246 + | MarR family transcriptional regulator Smed_1580 1678663 - 1678289 - | hypothetical protein Smed_1581 1678818 - 1678660 - | hypothetical protein moaA 1678822 - 1679871 + | molybdenum cofactor biosynthesis protein A TERM 1451 1679939 - 1679963 + F 75 -12.1 -3.23853 | opp_overlap 1679934 1679937, overlap 1679938 1679940 GTGCGAGGAACGAGC GGCATGCTGCG CAG CGCGGCATGCG TGTTAATTCGACGCG TERM 1452 1679940 - 1679962 + F 81 -15.6 -2.54098 | opp_overlap 1679934 1679937, overlap 1679939 1679938 TGCGAGGAACGAGCG GCATGCTGCG CAG CGCGGCATGC GTGTTAATTCGACGC TERM 1453 1681011 - 1680968 - g 74 -13 -3.26471 | gap 1 CTACCGCGAGAGCAA GCGCGGCCGGCGAGCGGTCGC TCA GCGTGCACTCACCGGCC-CTC TGGAATAGTGGAGGA Smed_1583 1680111 - 1681019 + | hypothetical protein mobA 1681033 - 1681692 + | molybdopterin-guanine dinucleotide biosynthesis protein A Smed_1585 1681689 - 1682213 + | molybdopterin-guanine dinucleotide biosynthesis protein B Smed_1586 1683488 - 1682346 - | Sel1 domain-containing protein TERM 1454 1683584 - 1683563 - R 100 -15.1 -4.91852 | GTCACGAAAAATAAA CGGGGCCGG TTTC CCGACCCCG ATTGCAGTGTTCAGG Smed_1587 1685771 - 1683609 - | OmpA/MotB domain-containing protein TERM 1455 1685090 - 1685126 + g 76 -9.3 -4.09628 | TTTGCAGCTGCTCTT CGGCCTGCTGCGGAG TGCCCTC CTCGGCCGCGGGCTG TTGTTCTTTAGCCTG TERM 1456 1685912 - 1685900 - H 78 -9.1 -4.13767 | opp_overlap 1685901 TGCGTCAGCCGAAAA TGCCG TAG CGGCA ACGCCGCAGCCACGG TERM 1457 1686132 - 1686148 + H 71 -7.9 -3.98816 | AACACGGGGCGTTCA GCGTGGG CAA CCGACGC TTTCCTATTGATTTC TERM 1458 1686253 - 1686243 - H 90 -4.6 -5.38549 | GCGAAACAAGAAAAA CCGG ATG CCGA AAGCCAACAGAGAGG TERM 1459 1686296 - 1686316 + G 79 -8.1 -4.37527 | opp_overlap 1686289, overlap 1686295 TTTCCAAACGGCTTG CGGCCACCG CAT CGGCTGCCG TTTTCGTGCTTATGA Smed_1588 1686274 - 1687056 + | extracellular solute-binding protein TERM 1460 1687153 - 1687118 - f 83 -5.2 -4.89477 | opp_overlap 1687123, overlap 1687119 1687123 TTTTGAAGAAGAAAA TGCAACGGCGGATGGG CTTG CCCTCCCGCCGTTTTT GTTTGACAAGGAATC TERM 1461 1687123 - 1687148 + F 100 -11.7 -5.27335 | opp_overlap 1687123 1687119 1687118 AAGAAGAAAATGCAA CGGCGGATGGG CTTG CCCTCCCGCCG TTTTTGTTTGACAAG TERM 1462 1687148 - 1687123 - f 83 -13.9 -3.48144 | opp_overlap 1687123, overlap 1687119 1687118 AAGAAGAAAATGCAA CGGCGGATGGG CTTG CCCTCCCGCCG TTTTTGTTTGACAAG TERM 1463 1687322 - 1687332 + G 76 -8.2 -4.17023 | overlap 1687317 CGACCCGCTATGCGG CCCC GCC GGGG TTTTCCGCTGGTTCG Smed_1589 1687251 - 1688054 + | polar amino acid ABC transporter, inner membrane subunit Smed_1590 1688051 - 1688881 + | polar amino acid ABC transporter, inner membrane subunit Smed_1591 1689052 - 1689318 + | Usg family protein Smed_1592 1690054 - 1689350 - | short-chain dehydrogenase/reductase SDR Smed_1593 1690853 - 1690167 - | hypothetical protein TERM 1464 1690892 - 1690906 + H 73 -2.8 -4.80396 | TCAATTCGCCTGACA TCGG CATTCCT CCGA TTTTTCACTGTTTTA TERM 1465 1691056 - 1691046 - H 91 -8.2 -5.14563 | TCCCGCATGAAAAAA GGCG TGC CGCC GCTGCATTGAACACC TERM 1466 1691630 - 1691645 + G 71 -4.6 -4.42386 | ACGAGACGCTCTACG TCGCCG AAGC CGTCGA TTTTCTCGATGACAA Smed_1594 1691161 - 1691985 + | methyltransferase type 12 Smed_1595 1692037 - 1692906 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 1467 1692939 - 1692904 - g 72 -4 -4.56597 | gap 1, overlap 1692907 GCCCGCCTCGAAAAA TGA-TGCCTGCCCCG GAGTCGA CGGCGCAGGAAATCA TCGAACACCTCCGCG TERM 1468 1693205 - 1693224 + G 71 -5.6 -4.25104 | overlap 1693203 CAGCTCCTGGGAAGT GGTCGATG CGAT CGCCGACC TTTTCGTCGGAGCCC Smed_1596 1692903 - 1693601 + | hypothetical protein Smed_1597 1694183 - 1693695 - | AsnC family transcriptional regulator Smed_1598 1694903 - 1694250 - | uracil-DNA glycosylase superfamily protein Smed_1599 1695459 - 1694872 - | nuclease Smed_1600 1695735 - 1697270 + | integral membrane sensor signal transduction histidine kinase TERM 1469 1697356 - 1697382 + F 84 -15.3 -2.9914 | opp_overlap 1697371 1697372 1697374, overlap 1697328 1697327 1697342 GGACGCGGCGCTGCT GGATTCCTGTG ACAAG CACAGGAATCC TGTGTGTCGAAACTG Smed_1601 1697549 - 1698481 + | transposase IS116/IS110/IS902 family protein Smed_1602 1699016 - 1698534 - | diacylglycerol kinase cobT 1700099 - 1699083 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 1470 1699457 - 1699479 + g 74 -5.4 -4.56597 | GCGGATCGGACAAGT GGTCGCGGTG CAG TGCCACGGCC TTTTTCACCGCCGCA TERM 1471 1700394 - 1700408 + G 70 -12.8 -2.8294 | overlap 1700392 1700405 TGATCGCCCTCCCCG CCGCCG TGA CGGCGG TCCTTCTGGGCGCTA cobS 1700237 - 1701025 + | cobalamin synthase Smed_1605 1701071 - 1701292 + | hypothetical protein Smed_1606 1701289 - 1701990 + | putative transmembrane signal peptide protein Smed_1607 1702759 - 1701998 - | ABC-2 type transporter Smed_1608 1703682 - 1702756 - | ABC transporter related Smed_1609 1704187 - 1703855 - | regulatory protein ArsR TERM 1472 1703895 - 1703914 + g 74 -9.3 -3.96148 | opp_overlap 1703893 AAAATCTCATATAGC GCCGTGA CCAGCC TCACGGC TTTGTCCTCGGCGAG Smed_1610 1705087 - 1704197 - | beta-lactamase domain-containing protein TERM 1473 1705263 - 1705273 + r 74 -8.2 -4.12902 | CGCCTAGTCGCAATG CCGG TAA CCGG TTTTGCGCGTCCTTA Smed_1611 1706423 - 1705251 - | extensin family protein TERM 1474 1705893 - 1705915 + g 71 -5.5 -4.27316 | gap 1, overlap 1705894 GGCAGGCGCCGACCG TTGCGGCGCG AGAG CGCGCC-CAC TTTTGGCTTCCACGG TERM 1475 1706628 - 1706593 - R 95 -14 -4.27584 | opp_overlap 1706593 1706626, overlap 1706595 ATCGGGAATGCAAAA GACAAGGCCCGCATCC TCGC GAATGCGGACCTCGGC TTTGAGAGCCTTTCC TERM 1476 1706626 - 1706595 - R 95 -15.2 -3.7398 | opp_overlap 1706593, overlap 1706593 CGGGAATGCAAAAGA CAAGGCCCGCATCC TCGC GAATGCGGACCTCG GCTTTGAGAGCCTTT Smed_1612 1707257 - 1706706 - | protease inhibitor Kazal-type Smed_1613 1709294 - 1707483 - | methyl-accepting chemotaxis sensory transducer TERM 1477 1708561 - 1708582 + g 70 -10.1 -3.53811 | ACCTTCGCCATCTGC CCGATCTCG TCGG CGCGATCGG TTTCCGGAACATCCA Smed_1614 1709504 - 1709893 + | thioesterase superfamily protein TERM 1478 1709923 - 1709934 + G 72 -4.4 -4.55023 | GAGCACGTACAGCCC GATC CAGC GATC TTTTCTCATATTCGC TERM 1479 1710248 - 1710261 + G 73 -8.1 -4.06633 | overlap 1710254 AACATTATTTCATGT CCAGG CGAG CCTGG TTCTTTGGCTTTCTC Smed_1615 1709905 - 1710495 + | hypothetical protein Smed_1616 1710886 - 1710533 - | hypothetical protein Smed_1617 1711062 - 1713998 + | excinuclease ABC subunit B TERM 1480 1714061 - 1714098 + F 81 -4 -5.03314 | ACTGATCCGAGTGCC CAGGTGTGCGGCTCGC AAAAGC GTGAGTCTAACCCCTG TTTTTTAGGGATACC TERM 1481 1714245 - 1714269 + G 71 -5.7 -4.36914 | gap 1, overlap 1714242 TATTTCTTTCGACGA CCGGCC-TCG CTCTGA TGACGGCCGG TTTTATGACAGCGGC Smed_1618 1714214 - 1714861 + | glycine rich transmembrane protein TERM 1482 1714939 - 1714904 - T 71 -12.6 -2.57963 | gap 1, opp_overlap 1714919 1714921, overlap 1714897 1714903 1714908 TTCATAATCACGAAG CATACCGTGTCGGCACA TCC TG-GCCGGCACGGCACG GCGGGATCGTTATTC TERM 1483 1714935 - 1714908 - T 71 -12 -2.95409 | gap 1, opp_overlap 1714919 1714921, overlap 1714897 1714904 1714903 TAATCACGAAGCATA CCGTGTCGGCACA TCC TG-GCCGGCACGG CACGGCGGGATCGTT Smed_1619 1715566 - 1714949 - | heat shock protein DnaJ domain-containing protein Smed_1620 1716066 - 1716278 + | cold-shock DNA-binding domain-containing protein TERM 1484 1716302 - 1716323 + T 100 -13.7 -4.66537 | opp_overlap 1716302 CAGAGCTTGAAAGAA CGGCGCTTC GCAA GAGGCGCCG TTTTGTATTGGAGGG TERM 1485 1716323 - 1716302 - T 81 -11.5 -3.93256 | opp_overlap 1716302 CAGAGCTTGAAAGAA CGGCGCTTC GCAA GAGGCGCCG TTTTGTATTGGAGGG Smed_1621 1717515 - 1716358 - | tRNA-dihydrouridine synthase A TERM 1486 1718230 - 1718241 + G 71 -5.8 -4.36914 | overlap 1718219 1718218 CCATGCGCCGGCTGA TCGC CTTC GCGA TTTTCTCGACCCGCC TERM 1487 1718451 - 1718431 - g 75 -3.9 -4.72188 | opp_overlap 1718449, overlap 1718421 CCAAGGTAAAAGAAA TCTTCCCCT ACG AGGCGAGGA GCGTCAGCGCGTCCT Smed_1622 1717608 - 1718693 + | phage integrase family protein TERM 1488 1718786 - 1718805 + T 74 -6.4 -4.4767 | gap 1 GTTTTCTCGCCGCGT CCCGTATCG TCT CG-TGCGGG TTTTCTAATAACTGC Smed_1624 1720348 - 1719116 - | hypothetical protein Smed_1625 1720735 - 1720454 - | hypothetical protein TERM 1489 1721036 - 1721091 + H 73 -12.7 -2.84723 | gap 3, opp_overlap 1721034 1721035 ACGGGCGAGAATACT CTTAGGGCGCTCGCCTCCGACCTCGAGG CCA CCTCGAGGCCT-AGCC-AGCGCCC-AAG TCATTGCTGTTGAAA TERM 1490 1721570 - 1721622 + H 93 -13.5 -3.86346 | gap 3, overlap 1721581 ATAATTAGAGTTATT GCGGC-ATGG-GGCGCGCGCAGCGCG TTTT CGCGC-GTGTGCGCCGCTATAGCCCC TTTCTGCCGCGCTAC TERM 1491 1721581 - 1721593 + H 82 -10.5 -4.10657 | overlap 1721570 TATTGCGGCATGGGG CGCGC GCA GCGCG TTTTCGCGCGTGTGC Smed_1627 1721674 - 1721868 + | hypothetical protein Smed_1628 1722486 - 1721977 - | hypothetical protein Smed_1630 1724139 - 1723189 - | hypothetical protein TERM 1492 1723974 - 1723984 + g 73 -6.8 -4.36914 | opp_overlap 1723973 TCATCCAGCAAAATG TGCC GTC GGCA TTTTGTGGACAGCCC Smed_1631 1724864 - 1724202 - | hypothetical protein TERM 1493 1724460 - 1724442 - G 95 -10.3 -4.64861 | opp_overlap 1724442 1724458 CTTTTGCAAAATAAA GCCGAGT TTCAC ACTCGGC TCGATTCGGACCTTT Smed_1632 1725869 - 1726573 + | thioredoxin domain-containing protein TERM 1494 1727314 - 1727334 + F 93 -11.1 -4.52143 | GTCCTTGTCGCCTGG GTCAGCGTC GGT GACGCAGAC TTTCTTGTATTTGCC Smed_1633 1727568 - 1728284 + | necrosis-inducing protein TERM 1495 1728327 - 1728349 + T 87 -14.1 -3.34398 | opp_overlap 1728325, overlap 1728325 ATTTCGATAATGATT GGCGCCGGC TTCTT GCCGGCGTC TCTTTGCGCGAGGGC Smed_1634 1728891 - 1728565 - | hypothetical protein Smed_1636 1730073 - 1729258 - | putative transmembrane protein Smed_1637 1730673 - 1730335 - | hypothetical protein TERM 1496 1730584 - 1730629 + g 74 -11.7 -3.4072 | gap 1 GAGATGCGCCTGGAT GGCGGCGGAGTATTGCGCCTGC AGC GCAG-CGCTCGCCTCTGCCGCC TTCTGCTCGGCCGTG Smed_1638 1731007 - 1730660 - | hypothetical protein Smed_1639 1732131 - 1731007 - | hypothetical protein Smed_1640 1733657 - 1732143 - | hypothetical protein Smed_1641 1736314 - 1733657 - | hypothetical protein TERM 1497 1735006 - 1734983 - G 70 -10.3 -3.60296 | CACCGCGAGGCCAAA GCGACGGCT GACCGG AACCGTCGC CTTGCCGCCCATGCG Smed_1642 1736725 - 1736321 - | hypothetical protein TERM 1498 1737307 - 1737326 + G 81 -10 -4.10657 | CGCTCTGTTTTCCTC CGACGATG GCAA CGTCGTCG TTTTCGGCGATATCG TERM 1499 1737911 - 1737921 + G 78 -6.8 -4.62336 | GACGACCATTGGCTG CGCA ACC TGCG TTTTTCGGATGACAT Smed_1643 1737035 - 1738156 + | outer membrane protease TERM 1500 1738163 - 1738144 - T 83 -13.6 -3.53012 | opp_overlap 1738135 1738162 CTCCTTCGGGCTAAA GGGCACGT TTTG ACGTGCCC GCGTTGCCGCTATCT TERM 1501 1738281 - 1738322 + T 100 -24.6 -3.05935 | GTTCGTTTGGCTTAA GCGTGGCGGACACAATGC TGGTGT GCATAGTGTCCGCCACGC TTGAGTGGACACTAT Smed_1644 1739008 - 1738418 - | hypothetical protein Smed_1645 1739655 - 1739005 - | hypothetical protein TERM 1502 1739392 - 1739357 - G 71 -11.1 -3.48115 | opp_overlap 1739363, overlap 1739355 TCGCCAGAAAATACA CCGCCACCCGCCTTC ACGCCG GAAAGCGGGTTGCTG CCCTGATAGGCGATC Smed_1646 1741526 - 1739655 - | hypothetical protein TERM 1503 1740366 - 1740387 + g 72 -3.7 -4.54026 | gap 1, opp_overlap 1740363 1740366, overlap 1740367 CTCCTCACGCAACGA CGCGATC-AC GTC GTCGATCGCC TTCTTTTCTTTCCCG Smed_1647 1742063 - 1741800 - | hypothetical protein Smed_1648 1742440 - 1742060 - | hypothetical protein TERM 1504 1742420 - 1742367 - G 86 -14 -3.86897 | gap 3, opp_overlap 1742365, overlap 1742368 1742371 GCGAGCCCGGAGAAA GTGACGGCGATGCGGAAG-TCG-ATCG CAC CGATGCGAACCTCCGCCTCGCCG-CGC AATGGATTGGCAGGC TERM 1505 1742421 - 1742368 - G 77 -14.8 -2.91924 | gap 3, opp_overlap 1742365, overlap 1742367 1742371 CGAGCCCGGAGAAAG TG-ACGGCGATGCGGAAG-TCG-ATCG CAC CGATGCGAACCTCCGCCTCGCCGCGCA ATGGATTGGCAGGCA TERM 1506 1742417 - 1742371 - G 87 -18.9 -2.70354 | gap 2, opp_overlap 1742365, overlap 1742367 1742368 GCCCGGAGAAAGTGA CGGCGATGCGGAAG-TCG-ATCG CAC CGATGCGAACCTCCGCCTCGCCG CGCAATGGATTGGCA Smed_1649 1742863 - 1742453 - | phage major tail protein, TP901-1 Smed_1650 1743421 - 1742957 - | hypothetical protein Smed_1651 1743719 - 1743423 - | hypothetical protein TERM 1507 1743580 - 1743618 + g 70 -7.3 -4.08557 | gap 1 GGCAACTGCGGCCAC GGCCGCTGCGTCATGGCG CCGG CGGTCTGGCGT-GCGGCC TTCTTCTTTGCGCCC Smed_1652 1744048 - 1743722 - | hypothetical protein Smed_1653 1744449 - 1744045 - | hypothetical protein Smed_1654 1745555 - 1744524 - | phage major capsid protein E Smed_1655 1745939 - 1745583 - | hypothetical protein Smed_1656 1746484 - 1745942 - | hypothetical protein Smed_1657 1747415 - 1746510 - | peptidase S49 Smed_1658 1749136 - 1747412 - | lambda family phage portal protein TERM 1508 1748866 - 1748912 + g 75 -14.3 -2.71364 | gap 1 CGATGATGTTGTCGA CGAGGCGCGAGGTGCCGGC-GG CACC CCAGCCGTCATTGCGCGCCACG TCGTTCAGCCGGTCG Smed_1659 1749369 - 1749133 - | hypothetical protein TERM 1509 1749324 - 1749348 + g 74 -12.8 -3.38072 | opp_overlap 1749339 CCTCACGTGCTTCGT CGAGCCGTGC CAGAA GCACGGCGCG TTCCTGTTCGGTCAG Smed_1660 1751422 - 1749380 - | phage terminase GpA Smed_1661 1752060 - 1751419 - | hypothetical protein TERM 1510 1751671 - 1751707 + g 81 -7.8 -4.49756 | overlap 1751674 GTACCGTCCGAGCTC GAGCGCTTCCTCGCGC TCCAT GCGCGCGGTGGTGATC TTTTGCTGTTTGAGC TERM 1511 1751866 - 1751811 - G 93 -20.5 -2.92192 | gap 2, opp_overlap 1751824 1751833 1751833, overlap 1751823 GCCCATCGAACGACA GCTCGGAAGCAACCGGCGCCGGCGCCG ATCG CGTCGCCG-CGCCGTTCGCT-CCGAAC CGCTGCGACGGGTCG TERM 1512 1751855 - 1751823 - G 74 -12.6 -3.34522 | gap 1, opp_overlap 1751824 1751833 1751833, overlap 1751811 ACAGCTCGGAAGCAA CCGGCGCCGGCGCCG ATCG CGTCGCCG-CGCCGT TCGCTCCGAACCGCT TERM 1513 1751824 - 1751854 + g 84 -16.1 -3.05384 | gap 1, opp_overlap 1751823 1751811, overlap 1751833 1751833 CAGCTCGGAAGCAAC CGGCGCCGGCGCCG ATCG CGTCGCCG-CGCCG TTCGCTCCGAACCGC Smed_1662 1752956 - 1752210 - | hypothetical protein TERM 1514 1753014 - 1752997 - R 100 -10.5 -4.98531 | opp_overlap 1752997 CCTTTAAACGAAAAA GGCGACC TCTC GGCCGCC TGTCATCTGGTCATA TERM 1515 1753056 - 1753071 + r 71 -10.4 -3.55444 | TGCCCTGAATCGGTT GCCTCG GCTT CGAGGC TTTCAGGGCTGGGGC Smed_1663 1753844 - 1753185 - | NusG antitermination factor TERM 1516 1753627 - 1753642 + g 77 -2.4 -5.02476 | ACGAGCGACCGTACG GCCATG ATAT CGAGGC TTTTTTCCACAGTCT Smed_1664 1755081 - 1753828 - | hypothetical protein TERM 1517 1754712 - 1754688 - G 83 -14.2 -3.53012 | CCGGCGCCGGCGAAA CCGGCGCCGG TAATG CCGTCGCCGG TAAATCCGTCTGCGG Smed_1665 1755192 - 1755440 + | hypothetical protein Smed_1666 1755751 - 1755446 - | hypothetical protein TERM 1518 1755632 - 1755612 - G 83 -11.8 -4.07687 | overlap 1755625 AGGCCCTCGTGAAAA CCGGCCGC AGAGA GCAGCCGG TGGATGGTCACCTGG Smed_1667 1757271 - 1755748 - | MT-A70 family protein TERM 1519 1756055 - 1756096 + g 76 -13.7 -3.14132 | gap 1, opp_overlap 1756048, overlap 1756092 TGCACATAGGTGAAG CCCCATGCCGCCATGACGCG GAA TGCGTCG-GGCAGCATCGGG TTCGTCGCCCAGAGG Smed_1668 1757474 - 1757268 - | hypothetical protein Smed_1669 1757719 - 1757471 - | hypothetical protein Smed_1670 1757940 - 1757719 - | hypothetical protein Smed_1671 1758395 - 1757940 - | hypothetical protein TERM 1520 1758565 - 1758522 - R 93 -11 -4.71061 | gap 1, overlap 1758524 1758526 1758545 AGGCAGAGGGAAAAA CA-GAGACAGGGACGCGCC GAAATCG GGCGCGTCCCTGCCAAGTG GCAAGGTCGCCAGTC TERM 1521 1758562 - 1758524 - R 95 -13.8 -3.96999 | overlap 1758522 1758526 1758545 GCAGAGGGAAAAACA GAGACAGGGACGCGCC GAAATCG GGCGCGTCCCTGCCAA GTGGCAAGGTCGCCA TERM 1522 1758560 - 1758526 - R 100 -20.8 -3.56644 | overlap 1758524 1758522 1758545 AGAGGGAAAAACAGA GACAGGGACGCGCC GAAATCG GGCGCGTCCCTGCC AAGTGGCAAGGTCGC Smed_1672 1758866 - 1758615 - | hypothetical protein Smed_1673 1758955 - 1759656 + | putative phage repressor TERM 1523 1759709 - 1759686 - f 81 -12.4 -3.73953 | opp_overlap 1759688, overlap 1759688 ATCAGTCCCAGCAAA GAGCCCGGCA ATTT TGCCGGGCTT TTTCGTTTCCGCGCG TERM 1524 1759707 - 1759688 - f 87 -15 -3.45324 | opp_overlap 1759688, overlap 1759686 CAGTCCCAGCAAAGA GCCCGGCA ATTT TGCCGGGC TTTTTCGTTTCCGCG TERM 1525 1759688 - 1759707 + F 100 -15 -4.98531 | opp_overlap 1759686 1759688 CAGTCCCAGCAAAGA GCCCGGCA ATTT TGCCGGGC TTTTTCGTTTCCGCG TERM 1526 1759948 - 1759908 - g 72 -7.6 -4.15328 | gap 1, overlap 1759934 AATTCAAACCAGAAA CACC-ATTGAGCGCATGGC CGAG ACGATGCGCTCGATCGGCG AGGGCTGCACAGATC Smed_1674 1759765 - 1760061 + | hypothetical protein Smed_1675 1760184 - 1760357 + | hypothetical protein Smed_1676 1760368 - 1760724 + | hypothetical protein TERM 1527 1761200 - 1761177 - g 78 -6.6 -4.56597 | overlap 1761178 GCTGCGTGGCAAAAA TCTCGCCTGC TGGT GCAGGCCAGG GGCACCCTGCCATGC Smed_1677 1760896 - 1761267 + | hypothetical protein Smed_1678 1761267 - 1761806 + | hypothetical protein Smed_1679 1761803 - 1762168 + | hypothetical protein Smed_1680 1762171 - 1762464 + | hypothetical protein Smed_1681 1762667 - 1763488 + | alpha/beta hydrolase fold TERM 1528 1763595 - 1763571 - f 78 -11.4 -3.68908 | opp_overlap 1763573 1763592 AAACATCGACCGAAA GCCGCCGC TCTCCGATG GCGGCGGC GTTGAGTGGGATCCT Smed_1682 1763657 - 1763800 + | hypothetical protein Smed_1683 1764394 - 1767762 + | sterile alpha motif-containing protein TERM 1529 1768825 - 1768808 - g 71 -9.1 -3.79043 | CAGCATGAATGGAAA TCGCGCC ATGA GGCGCAA ACCCGGCATTGACCC Smed_1684 1768649 - 1768837 + | hypothetical protein Smed_1685 1769091 - 1768873 - | hypothetical protein TERM 1530 1769361 - 1769391 + r 73 -11.9 -3.14522 | gap 2, opp_overlap 1769354, overlap 1769354 TCAGGAGATCTCGAA GTCGCGCGGCGCTGG AAT CCGGCGC-G-GCGAC TTCGATCTGCCTTGC Smed_1687 1769629 - 1769456 - | hypothetical protein Smed_1688 1770092 - 1770730 + | putative glycine-rich cell wall structural transmembrane protein TERM 1531 1770777 - 1770806 + T 100 -22.9 -3.66803 | opp_overlap 1770770 1770765 GAAGCACACCCTCCA GCCGCCGCGTTGC GCCC GCAGCGCGGCGGC TTTCCAATCTTCGGG Smed_1689 1771084 - 1770836 - | hypothetical protein TERM 1532 1771216 - 1771199 - H 75 -9.1 -3.95555 | ACAACTATCGATAAA GCCCCTC GACG GAGGAGC AAAAGGGAAGTGCGG Smed_1690 1771488 - 1771724 + | hypothetical protein Smed_1691 1772197 - 1772403 + | hypothetical protein TERM 1533 1772784 - 1772759 - g 74 -2.5 -4.82901 | gap 1, overlap 1772761 CTTCTTTCAGAAAAA CGCC-GACAATA TTC TGCTGCCGGGCG AGGATTTCCCCTACC Smed_1692 1772592 - 1773278 + | fumarylacetoacetate (FAA) hydrolase TERM 1534 1773854 - 1773833 - g 73 -10.9 -3.66286 | gap 1, opp_overlap 1773836 ACACTATGTGAAGAA CT-GGCAGCG CTA CGCTGCCCAG CTCACGCTGCTGGAT Smed_1693 1773342 - 1773872 + | hexapaptide repeat-containing transferase Smed_1694 1774297 - 1773899 - | ferric uptake regulator family protein Smed_1695 1775124 - 1774297 - | ABC-3 protein Smed_1696 1776022 - 1775117 - | ABC transporter related TERM 1535 1775943 - 1775928 - G 72 -4 -4.65895 | gap 1 CGGCTGATCGAAAAA TCG-ACG CCG CGTACGA GCCATTTCCCGTTTC Smed_1697 1776166 - 1777209 + | periplasmic solute binding protein Smed_1698 1777936 - 1777223 - | LmbE family protein Smed_1699 1779015 - 1777948 - | ABC transporter related TERM 1536 1778128 - 1778110 - G 72 -3.8 -4.55697 | ATCGGCATAAACAAA GCTCTCCG CGC CGAAAAAC TCGACATTGCGCACG TERM 1537 1778804 - 1778778 - G 95 -10.8 -4.63542 | overlap 1778782 CATAATTCTGAAAAA CCATGGCAAGAC CAC GCCTTGCCGCGG GAAGTGCGGTGACAT Smed_1700 1779872 - 1779027 - | binding-protein-dependent transport systems inner membrane component Smed_1701 1780795 - 1779869 - | binding-protein-dependent transport systems inner membrane component TERM 1538 1779945 - 1779931 - G 75 -3.4 -4.88918 | overlap 1779932 1779934 1779935 TCACGGCAAACAAAA GCACCG AGG CGGCGG CGGCCTCGCCCATGC TERM 1539 1780738 - 1780770 + g 100 -17.7 -4.04719 | overlap 1780739 GCCTGGTCAGGGAGG GAGCTGGGAGGTCCG TTA CGGACCTCCCAGCCA TTTGTCGTATGTCGT TERM 1540 1780739 - 1780769 + g 93 -21.2 -3.02109 | overlap 1780738 CCTGGTCAGGGAGGG AGCTGGGAGGTCCG TTA CGGACCTCCCAGCC ATTTGTCGTATGTCG Smed_1702 1782067 - 1780799 - | extracellular solute-binding protein TERM 1541 1782192 - 1782169 - R 85 -15.2 -3.05463 | ACCGTCCGCAGTGAA GCGCGCCGGC AATG GTCGGCGCGC GTCGTCAAAGCCTGA Smed_1703 1782346 - 1782209 - | hypothetical protein TERM 1542 1782374 - 1782394 + r 72 -8.9 -3.87994 | CCGGAGGTCGTCTGC GTCCGGTGC GTA GCGCCGAAC TTTCTCGGCATCGAT TERM 1543 1783226 - 1783244 + r 72 -8.8 -3.85698 | overlap 1783232 TTGCGGTTTCGTTGG GTTGGAGC GCC GCTCCGGC TTTCTGCAGAAGGCC Smed_1705 1784003 - 1783203 - | IstB ATP binding domain-containing protein TERM 1544 1783232 - 1783269 + g 100 -29.3 -4.07568 | opp_overlap 1783256 1783257, overlap 1783226 TTTCGTTGGGTTGGA GCGCCGCTCCGGCTTTC TGCA GAAGGCCGGAGCGGCGC TTTTCGCGAAGCCGA Smed_1706 1785292 - 1784003 - | integrase catalytic region Smed_1707 1786553 - 1785786 - | short-chain dehydrogenase/reductase SDR Smed_1708 1786655 - 1787290 + | GntR family transcriptional regulator Smed_1709 1787778 - 1787374 - | putative transmembrane signal peptide protein Smed_1710 1789532 - 1787907 - | Alpha-N-arabinofuranosidase Smed_1711 1789875 - 1790450 + | tripartite ATP-independent periplasmic transporter DctQ Smed_1712 1790447 - 1792237 + | TRAP dicarboxylate transporter, DctM subunit TERM 1545 1792297 - 1792261 - T 100 -26.9 -3.54424 | opp_overlap 1792268 CGCTATTCGCCGAAA CAGTGAAGCCATCTGAC GCT GTCAGATGGCTTCACTG CAATCATGAGCCTGA TERM 1546 1792268 - 1792290 + T 88 -16.4 -3.07113 | opp_overlap 1792261 CGCCGAAACAGTGAA GCCATCTGAC GCT GTCAGATGGC TTCACTGCAATCATG TERM 1547 1792376 - 1792327 - T 91 -7.9 -5.08169 | opp_overlap 1792332, overlap 1792328 ATAGATTCCAAAAAA TTAGAGCGGGATGCGGAAAGC GGCGCAGA GTTTTCATCATCCCGCTCTAT ACGCCTGGGAGGCGA TERM 1548 1792375 - 1792328 - T 78 -11.4 -3.63817 | opp_overlap 1792332, overlap 1792327 TAGATTCCAAAAAAT TAGAGCGGGATGCGGAAAGC GGCGCAGA GTTTTCATCATCCCGCTCTA TACGCCTGGGAGGCG Smed_1713 1793690 - 1792392 - | histidinol dehydrogenase Smed_1714 1793871 - 1794419 + | XRE family transcriptional regulator Smed_1715 1794538 - 1795578 + | extracellular solute-binding protein Smed_1716 1795675 - 1796742 + | spermidine/putrescine ABC transporter ATPase subunit TERM 1549 1796788 - 1796804 + G 76 -7.9 -4.29073 | overlap 1796790 AATCCTTCGTCCTGA TTGCGCC ACT GGCGCTA TTTCTTGCCTTCTTC TERM 1550 1796790 - 1796802 + G 74 -10.5 -3.73097 | overlap 1796788 TCCTTCGTCCTGATT GCGCC ACT GGCGC TATTTCTTGCCTTCT Smed_1717 1796739 - 1797920 + | binding-protein-dependent transport systems inner membrane component Smed_1718 1797917 - 1798702 + | binding-protein-dependent transport systems inner membrane component TERM 1551 1798748 - 1798724 - T 100 -15 -5.02074 | opp_overlap 1798723 TTATGCGCCAAAAAA GGCCCCGGAA AAGCA CTCCGGGGCC CTGTCTCGTCAAAAG Smed_1719 1799883 - 1798777 - | TRAP dicarboxylate transporter- DctP subunit Smed_1720 1800047 - 1799925 - | hypothetical protein Smed_1721 1801204 - 1800176 - | aldo/keto reductase TERM 1552 1800328 - 1800295 - G 74 -12.3 -3.4285 | TCACGCAATCGATAA TCTGCGCGGAACGGC TGGC GCCGATCAGCGCCGA GGTGATGCGGCCGCC Smed_1722 1802425 - 1801292 - | oxidoreductase domain-containing protein Smed_1723 1803202 - 1802441 - | xylose isomerase domain-containing protein Smed_1724 1805726 - 1803252 - | Beta-mannosidase TERM 1553 1804806 - 1804826 + g 100 -11.9 -4.46212 | AAAACGGCTTCCTGC CTCGTCACT GTC GGTGACGAG TTTTATGGTGCGGAA TERM 1554 1805745 - 1805765 + r 78 -11.1 -3.64703 | CACAGTCCATTCGTG CGGCGGC CTGTACC GCCGCCG TTTCGATCACGCGGA TERM 1555 1805776 - 1805805 + r 100 -20.1 -3.58343 | gap 1, overlap 1805802 CGCCGTTTCGATCAC GCGGA-CCGGGGCA TGC TGCCCCGGCTCCGC TTTGCGGCTCGTCAG Smed_1725 1806902 - 1805817 - | ABC transporter related Smed_1726 1807850 - 1806909 - | binding-protein-dependent transport systems inner membrane component Smed_1727 1808751 - 1807843 - | binding-protein-dependent transport systems inner membrane component Smed_1728 1810179 - 1808944 - | extracellular solute-binding protein Smed_1729 1810284 - 1810538 + | hypothetical protein TERM 1556 1810710 - 1810688 - g 75 -3.3 -4.90906 | gap 1, overlap 1810690 1810692 TGACAAGACGAAAAA CAGAGCGACG ATGG CGCCGC-CGG CCGAAGGCGGCAGGC Smed_1730 1810668 - 1811729 + | periplasmic binding protein/LacI transcriptional regulator TERM 1557 1811787 - 1811769 - T 85 -11.6 -3.99481 | opp_overlap 1811778, overlap 1811764 1811770 GGGATGAAAAGAGAA TCCGCGCC GCA GGCGCGGC AGGGCTCAAAACGCC TERM 1558 1811786 - 1811770 - T 84 -15.1 -2.98966 | opp_overlap 1811778, overlap 1811769 1811764 GGATGAAAAGAGAAT CCGCGCC GCA GGCGCGG CAGGGCTCAAAACGC Smed_1731 1812056 - 1811793 - | hypothetical protein TERM 1559 1812145 - 1812127 - R 79 -13.8 -3.02144 | GGACGTGTCGTAAGA GGGACGGC CCA GCCGCCCC TCCTGACGCATGCGA Smed_1732 1813593 - 1812163 - | 6-phosphogluconate dehydrogenase TERM 1560 1812745 - 1812723 - G 71 -9 -3.72576 | opp_overlap 1812721 1812723 1812724, overlap 1812724 CCTTCGCCGAGGAAA TGCTGCGGGC TGC GACCGCAGCT TCGATGGCGGTCGCA TERM 1561 1812744 - 1812724 - G 70 -12.5 -2.83403 | opp_overlap 1812724 1812723 1812721, overlap 1812723 CTTCGCCGAGGAAAT GCTGCGGGC TGC GACCGCAGC TTCGATGGCGGTCGC TERM 1562 1812724 - 1812744 + g 71 -12.5 -3.06183 | opp_overlap 1812723 1812724, overlap 1812723 1812721 CTTCGCCGAGGAAAT GCTGCGGGC TGC GACCGCAGC TTCGATGGCGGTCGC TERM 1563 1813504 - 1813518 + g 72 -4.2 -4.59511 | overlap 1813491 CGTGCGGTTGAAAAC GGCGAT CTT GTTGCC TTTTTCAGCAATGTT Smed_1733 1813960 - 1814877 + | helix-turn-helix domain-containing protein Smed_1734 1814996 - 1815442 + | hypothetical protein Smed_1735 1815423 - 1815776 + | glyoxalase/bleomycin resistance protein/dioxygenase Smed_1736 1816971 - 1816048 - | lipid A biosynthesis lauroyl acyltransferase TERM 1564 1816843 - 1816863 + g 71 -8.3 -3.85698 | GATCCAGCGGGCAAC GCGATCCAT GAA ATTGATCGC TTTGTCCGGGGGGAA Smed_1737 1818010 - 1816982 - | alcohol dehydrogenase TERM 1565 1817926 - 1817970 + g 78 -12.3 -3.71917 | gap 3 CCTTGACCCGCAGCG TCACC--TC-GCCGGGGCCGGG AGCC TCCGGCTCCGGCAGATCGGTGA TTTCAAGTTTGCGGT Smed_1738 1819337 - 1818054 - | 3-oxoacyl-(acyl carrier protein) synthase II Smed_1739 1820552 - 1819350 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1566 1819962 - 1819979 + g 71 -9.1 -3.72576 | opp_overlap 1819948 ACCACCGACGAGCGT GTGGGTC GACT GACCCGC TTTGATACGGGCGAA Smed_1740 1821031 - 1820555 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ TERM 1567 1820895 - 1820856 - G 84 -3.7 -5.1861 | gap 3, opp_overlap 1820859 GCCAGCACCAAAAAA CCGG-ATGCCTGCGCCATCG TTT CGATAA-GCAG-CACGCCGG GGACCAGGGGATAGC TERM 1568 1821115 - 1821069 - R 100 -23.1 -4.8622 | overlap 1821071 GCGCTCAAGTAAAAA TGCCGATGCCGCCTGTCAAGC GCGGG GCGCGACAGGCGGCATCGGGA AAAGGAACCGAACCG TERM 1569 1821113 - 1821071 - R 100 -25.7 -2.70268 | overlap 1821069 GCTCAAGTAAAAATG CCGATGCCGCCTGTCAAGC GCGGG GCGCGACAGGCGGCATCGG GAAAAGGAACCGAAC Smed_1741 1821535 - 1821248 - | acyl carrier protein Smed_1742 1822067 - 1822795 + | CRP/FNR family transcriptional regulator Smed_1743 1823804 - 1822851 - | cobalamin biosynthesis protein CobD TERM 1570 1823099 - 1823121 + g 81 -2.5 -5.17054 | GGTGAAACCCGTGAT CGCGCCGCG CCACC CGTATCGCG TTTTTTGCCTCTTCT Smed_1744 1824836 - 1823835 - | aminotransferase class I and II Smed_1745 1826128 - 1824839 - | cobyrinic acid a,c-diamide synthase TERM 1571 1825463 - 1825517 + g 70 -10.6 -3.58905 | opp_overlap 1825477 1825504, overlap 1825423 1825464 CCTCGTCAGGGGCGT CGCGGCGCCAAGCATTGCATCGATAT CGC AAGCCGATGCAACGCTTGTGGCCGCA TTGTCTATGAAGGCT TERM 1572 1825464 - 1825516 + g 72 -14.1 -2.75022 | opp_overlap 1825477 1825504, overlap 1825423 1825463 CTCGTCAGGGGCGTC GCGGCGCCAAGCATTGCATCGATAT CGC AAGCCGATGCAACGCTTGTGGCCGC ATTGTCTATGAAGGC Smed_1746 1826964 - 1826125 - | uroporphyrin-III C-methyltransferase TERM 1573 1826190 - 1826172 - G 86 -16 -3.15663 | overlap 1826145 ACGGATCGGGAGCAA GCGCTCGG CCT CCGAGCGC ACCGAGCCAATCGAG TERM 1574 1826900 - 1826883 - G 76 -8.3 -4.19953 | CATGCAACGTCAAAA GGCCGGG GTCG CCCGGAC CCGCTCCGACGAGCC Smed_1747 1827532 - 1827095 - | putative cobalamin biosynthesis protein TERM 1575 1827344 - 1827312 - G 89 -13.3 -4.16016 | overlap 1827330 1827331 GCAGCGTCGAAGAAA CGCGGCGGCACGGAA AAA TGCCGCGCGACCGCG TGGATCGCCGGCTCC TERM 1576 1827357 - 1827330 - G 76 -5.5 -4.65895 | gap 1, overlap 1827312 1827331 GGCGGCACGGAAAAA TGCCGCGCGACC GCGTG GATCGC-CGGCT CCTCGGCGCGTGCGT TERM 1577 1828249 - 1828262 + G 74 -5.9 -4.4261 | opp_overlap 1828249 CGACATCGACAAACA CCGGC GGCT GTCGG TTTTCCTGTTCACCA TERM 1578 1828297 - 1828313 + G 72 -2.1 -4.72272 | overlap 1828299 CTTCGTCCCCCTGAT CGGCCTC TAT GACGGCG TTTTTGGTCCGGGCA Smed_1748 1827860 - 1828645 + | hypothetical protein Smed_1749 1830493 - 1828694 - | ABC transporter related TERM 1579 1830529 - 1830501 - R 81 -11.7 -3.68341 | opp_overlap 1830501 1830500, overlap 1830502 AATGTCATCGAAGAA CGTCCTGCCCC TCCAACC GGGGCAGGACC GGTTTCGTCACGCGA TERM 1580 1830528 - 1830502 - R 83 -15.2 -2.80522 | opp_overlap 1830501 1830500, overlap 1830501 ATGTCATCGAAGAAC GTCCTGCCCC TCCAACC GGGGCAGGAC CGGTTTCGTCACGCG Smed_1750 1831481 - 1830537 - | acetamidase/formamidase TERM 1581 1831043 - 1831025 - G 83 -17.4 -2.5602 | overlap 1831021 GAACGACGGAATGCA GCCCCGGC TCC GCCGGGGC AAGCCCGATCGTGCC Smed_1751 1833087 - 1831471 - | extracellular solute-binding protein TERM 1582 1832719 - 1832701 - G 74 -12.4 -3.4252 | overlap 1832704 TTTGATCGATGAGAA GAACCCGG CAC CCGGGCTC TGGGTCGTCGGATTC TERM 1583 1832716 - 1832704 - G 76 -10.5 -3.8512 | overlap 1832701 GATCGATGAGAAGAA CCCGG CAC CCGGG CTCTGGGTCGTCGGA Smed_1752 1834048 - 1833128 - | binding-protein-dependent transport systems inner membrane component Smed_1753 1834890 - 1834048 - | binding-protein-dependent transport systems inner membrane component Smed_1754 1835539 - 1834925 - | response regulator receiver/ANTAR domain-containing protein Smed_1755 1836702 - 1835536 - | putative regulator protein TERM 1584 1836758 - 1836724 - H 100 -15 -5.0925 | opp_overlap 1836735 CTCGAAAAGCAAAAA GGCCCCGCCGAGAAAC AGA GTTTCTCTTCGAGGCC CAGATGCCGATACGT Smed_1756 1836977 - 1837150 + | hypothetical protein Smed_1757 1837623 - 1837198 - | hypothetical protein TERM 1585 1837328 - 1837308 - G 76 -14.1 -3.25093 | overlap 1837306 ACAGTGCAACCAACA CGATCGACA GCT TGTCGATCG GTGCGACGCGAGCGG Smed_1758 1838267 - 1837623 - | cob(I)yrinic acid a,c-diamide adenosyltransferase cobN 1842099 - 1838278 - | cobaltochelatase TERM 1586 1839400 - 1839423 + g 79 -9.6 -4.1552 | opp_overlap 1839400 ATGATCCTGCAGATA TCGGCGGA TAAGCAAT TCCGCCGA TTTCTTGCCAAGCTC TERM 1587 1842042 - 1842075 + g 71 -8.2 -3.89346 | gap 2, opp_overlap 1842018 1842016, overlap 1842019 1842045 CCGGGCTCTGCCCGA GGT-CGATCGCC-TCG TTGC CGTCGGCGATCGTACC TTTCTGGGCTAGGAG Smed_1760 1843203 - 1842139 - | cobalamin biosynthesis protein CobW TERM 1588 1842771 - 1842815 + g 71 -12.8 -3.07816 | gap 1 CTGCGAAGCGGCCCG CGG-CAACGGCGGCGCTATCG ACGA CGGTAACGACGCCGTCGACCG TTACCTCGCTGCGGA cobU 1843734 - 1843207 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase TERM 1589 1843795 - 1843775 - H 70 -3.8 -4.68645 | opp_overlap 1843778, overlap 1843776 1843777 GAGGCAAAAGCAAAA GCGCGCGC AATAA GCGCGTTC GATCAGAAATCTATG TERM 1590 1844055 - 1844068 + H 74 -8.1 -4.17657 | CCGGCTGATCGCGAT GCCAC GCCA GTGGC TTTTCCGGTATCCTG Smed_1762 1844498 - 1845382 + | hypothetical protein Smed_1763 1847587 - 1845410 - | putative Chase2 sensor protein Smed_1764 1848627 - 1847812 - | alpha/beta hydrolase fold Smed_1765 1850173 - 1848719 - | cobyric acid synthase TERM 1591 1850014 - 1850039 + g 77 -13.3 -3.65201 | overlap 1850023 1850024 GCGCACGGCCGATTT CGCCGCCGT CGTCGGAA ACGGCGGCG TTGTTCGACATGTTC Smed_1766 1850419 - 1850562 + | hypothetical protein TERM 1592 1850664 - 1850633 - f 100 -12.9 -5.22039 | GGGAAATGCAAAAAA CCGCACCCAACCG ATCGAA CGGAAGGGTGCGG CCGCAGGCTTGTTCC Smed_1767 1851013 - 1852011 + | substrate-binding region of ABC-type glycine betaine transport system TERM 1593 1852433 - 1852410 - g 84 -11 -4.13246 | gap 1 GATCCGACACATAAA CCGGCTGATCG ATC CGACC-GCCGG AGAGGTCCTCTACGA Smed_1768 1852183 - 1853229 + | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 1594 1853253 - 1853283 + T 100 -14.8 -4.59773 | opp_overlap 1853247 1853246 1853250 1853257, overlap 1853247 CGACAGAACGCACAT GCAAGGGGCACC CTCGCGA GGTGCCCTTTGC TTTTTCCGGCTCACG Smed_1769 1853701 - 1853294 - | 4-oxalocrotonate tautomerase TERM 1595 1854239 - 1854271 + G 80 -14.2 -3.23216 | gap 1 CAGATCGACATTCTT CTCGCCATGCGGCAG TCTG CTGCCGCA-GACGAG TTGATCGTCCTCCGA Smed_1770 1853804 - 1854685 + | LysR family transcriptional regulator TERM 1596 1855056 - 1855033 - g 75 -11.7 -3.66018 | gap 1, overlap 1855047 CCATCAGCTCAACAA GCGCGCTGCG GAAAT CGC-GCGCGC AGTCGCTGACAAAGC Smed_1771 1854761 - 1855774 + | methionine synthase I Smed_1772 1857868 - 1855817 - | acyltransferase 3 TERM 1597 1857802 - 1857791 - G 70 -7.2 -4.053 | ACCACCGGATATAAA GCCG AAAC CGGC GTGAAACAGCAGGAC Smed_1773 1858775 - 1858023 - | lipoprotein signal peptide Smed_1774 1859560 - 1858856 - | hypothetical protein TERM 1598 1859518 - 1859491 - G 100 -12.6 -5.40072 | opp_overlap 1859492 1859493, overlap 1859493 TCCCGCGCAAAAAAA GACCGTGCGGCG CAAG CGCCGCACGGAT TGCTTCGAGTACATC TERM 1599 1859492 - 1859517 + g 88 -16.1 -3.35992 | opp_overlap 1859491 1859493, overlap 1859493 CCCGCGCAAAAAAAG ACCGTGCGGCG CAAG CGCCGCACGGA TTGCTTCGAGTACAT TERM 1600 1859516 - 1859493 - G 100 -19.6 -4.34482 | opp_overlap 1859492 1859493, overlap 1859491 CCGCGCAAAAAAAGA CCGTGCGGCG CAAG CGCCGCACGG ATTGCTTCGAGTACA TERM 1601 1859493 - 1859516 + g 90 -19.6 -2.61274 | opp_overlap 1859493 1859491, overlap 1859492 CCGCGCAAAAAAAGA CCGTGCGGCG CAAG CGCCGCACGG ATTGCTTCGAGTACA Smed_1775 1861239 - 1859668 - | trimethylamine methyltransferase TERM 1602 1861412 - 1861430 + H 76 -13.2 -3.03243 | CGGTACGGGTCTTAA TGCGCCAA CGG TTGGCGCA TCTTAGACACTCAAT TERM 1603 1861607 - 1861621 + H 84 -7 -4.79223 | overlap 1861613 TTGTGGCAGCACTTA CGTCGG GCG CCGTCG TTTTTCATCATATGC Smed_1776 1861761 - 1862459 + | methionine synthase TERM 1604 1862474 - 1862514 + F 100 -22.8 -3.90048 | opp_overlap 1862479, overlap 1862479 AGACGATTCGACATG AAAAAGCCGGCTGCTCGT GTGAA ACGAGCAGCCGGCTTTTC TGTTTTTAGCGACGA TERM 1605 1862479 - 1862509 + F 100 -22.7 -4.98672 | opp_overlap 1862479, overlap 1862474 ATTCGACATGAAAAA GCCGGCTGCTCGT GTGAA ACGAGCAGCCGGC TTTTCTGTTTTTAGC TERM 1606 1862509 - 1862479 - f 100 -22.7 -4.80882 | opp_overlap 1862479 1862474 ATTCGACATGAAAAA GCCGGCTGCTCGT GTGAA ACGAGCAGCCGGC TTTTCTGTTTTTAGC Smed_1777 1862764 - 1863384 + | hypothetical protein Smed_1778 1863557 - 1863405 - | entericidin EcnAB Smed_1779 1863804 - 1863983 + | lipoprotein transmembrane TERM 1607 1863981 - 1864020 + T 86 -14.3 -3.30474 | AGCAGCTCCGGTTAC TGAGCCGGCCCGCCG CAAACCGAGT TGGCGAGCCGGCTCA TTCGTCGTTGTGGAG Smed_1780 1864522 - 1864052 - | BA14K family protein TERM 1608 1864821 - 1864836 + H 70 -3.9 -4.61231 | opp_overlap 1864821, overlap 1864819 CAAGCTTCTCACAGA CGGCG GTGCAG CGTCG TTTTTGGACATATCG TERM 1609 1865145 - 1865166 + G 74 -10.1 -3.72576 | opp_overlap 1865142 CGAAGCGGACAAGGC GGCGGCC GAACTGGA GGCCGCC TTTGATCGGGAGCGC Smed_1781 1864921 - 1865223 + | hypothetical protein Smed_1782 1865216 - 1865803 + | hypothetical protein Smed_1783 1865800 - 1866903 + | methylenetetrahydrofolate reductase TERM 1610 1867483 - 1867466 - g 81 -9.9 -4.24342 | CCGCTCATCAAGAAA TACGACG TCCC CGTCGTA GCCATCTCCAACGAC Smed_1784 1867049 - 1868008 + | methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase Smed_1785 1868010 - 1868348 + | hypothetical protein Smed_1786 1868368 - 1870419 + | ferredoxin Smed_1787 1870513 - 1871175 + | chloramphenicol phosphotransferase family protein Smed_1788 1872102 - 1871206 - | LysR family transcriptional regulator TERM 1611 1872574 - 1872600 + H 74 -11.1 -3.55122 | opp_overlap 1872592, overlap 1872571 GGCGGAATCGATCAT TATGTTTGATG AATCA CATCAAACATA TTCGTTTGAATGATC Smed_1789 1872678 - 1872878 + | hypothetical protein TERM 1612 1872931 - 1872951 + T 100 -15.5 -4.90266 | opp_overlap 1872926 1872931 CAAGACCAAACTATA GGGCATTCC AAC GGAATGCCC TTTTTCATTGATGCC TERM 1613 1872951 - 1872931 - T 85 -15.5 -3.0623 | opp_overlap 1872931, overlap 1872926 CAAGACCAAACTATA GGGCATTCC AAC GGAATGCCC TTTTTCATTGATGCC Smed_1790 1873861 - 1872998 - | alpha/beta hydrolase fold TERM 1614 1874000 - 1874018 + H 78 -3.8 -5.01811 | overlap 1874002 TCTGGTAGAAACGTG TATCTGGC GTC GCCACATG TTTTTGCTTTCGTAA Smed_1791 1874077 - 1874676 + | hypothetical protein Smed_1792 1875670 - 1874699 - | cation diffusion facilitator family transporter TERM 1615 1875399 - 1875375 - G 74 -4.9 -4.62336 | overlap 1875358 ATCGCACTGGAAAAA CCAGCAAGGTC GCC GAGTTTGCCGG TACCGAATGTAAACC Smed_1793 1875939 - 1875667 - | hypothetical protein Smed_1794 1876418 - 1877434 + | AraC family transcriptional regulator TERM 1616 1877997 - 1877948 - T 75 -10.5 -3.6579 | opp_overlap 1877963, overlap 1877951 1877953 AATCGATTTCAACAA GATGAGATGCGGGATGCGGCCGG AAAA CCGCACGCTTCCCTCATCCCGCC TTCGCGTTCAGTGTT TERM 1617 1877994 - 1877951 - T 71 -13 -2.64045 | opp_overlap 1877963, overlap 1877948 1877953 CGATTTCAACAAGAT GAGATGCGGGATGCGGCCGG AAAA CCGCACGCTTCCCTCATCCC GCCTTCGCGTTCAGT TERM 1618 1877992 - 1877953 - T 70 -12 -2.85813 | opp_overlap 1877963, overlap 1877951 1877948 ATTTCAACAAGATGA GATGCGGGATGCGGCCGG AAAA CCGCACGCTTCCCTCATC CCGCCTTCGCGTTCA Smed_1795 1878812 - 1877988 - | response regulator receiver protein TERM 1619 1878928 - 1878947 + r 77 -12.1 -3.49475 | opp_overlap 1878907 ATGGATTGCACACCC CGGCCGC CGAAAA GCGGCCG TTGTGTACCAATCAG Smed_1796 1880600 - 1878987 - | hemolysin-type calcium-binding region TERM 1620 1880392 - 1880353 - G 74 -15 -2.57795 | opp_overlap 1880349 1880348, overlap 1880349 TCGATCACCAACGTA TCGGTACCGGCCCCGC CCGTAACC GCGCCGCCGGTACCGA TCAGGGTTATTTGAT Smed_1797 1880912 - 1881571 + | deaminase-reductase domain-containing protein TERM 1621 1881606 - 1881627 + T 74 -12.9 -3.01791 | GGTCGCGGATCGTCG ACGCGGGGC TTCG GCCCCGCGG TCTTGCGGCACGGCT Smed_1798 1881946 - 1881683 - | putative signal peptide protein Smed_1799 1882263 - 1882901 + | integral membrane protein TerC TERM 1622 1882963 - 1882998 + T 83 -14.1 -3.07344 | gap 1, opp_overlap 1882975 GGATCCAGGCCGGAT GTGCAGGGAGAAGCGG CATTA CCGCTCCTCCCT-CAC TCTATTGAGCAGTCG Smed_1800 1885626 - 1883047 - | MscS mechanosensitive ion channel Smed_1801 1886217 - 1885756 - | glutathione-dependent formaldehyde-activating GFA Smed_1802 1886974 - 1886411 - | hypothetical protein Smed_1803 1888892 - 1887117 - | TrkA domain-containing protein TERM 1623 1888600 - 1888586 - G 71 -8.6 -3.94 | TGAAGGCTGAAAGAA TGGTCA CCG TGACCA CAAGAAGAGCAAGCT TERM 1624 1889093 - 1889073 - H 72 -6.7 -4.31329 | overlap 1889074 1889085 1889086 CGAAAAATCGCAAAA TCCCCCGCG AAA CGCGAGAGG TCGCCGCAAGCACGC TERM 1625 1889107 - 1889120 + H 81 -3.1 -5.22006 | gap 1 GGTCGCCGCAAGCAC GC-GGA ATG TCCTGC TTTTTCTTCTCGTCG Smed_1804 1889425 - 1889706 + | putative transmembrane protein Smed_1805 1889744 - 1890028 + | putative transmembrane protein Smed_1806 1890477 - 1890139 - | hypothetical protein Smed_1807 1890763 - 1890470 - | hypothetical protein Smed_1808 1891650 - 1890841 - | putative transmembrane protein TERM 1626 1891621 - 1891642 + g 76 -9.3 -4.07975 | opp_overlap 1891570 AAACTCGAGCAGCAT CGCCGCGCC TTGA GGCACGGTG TTTGTCATTGGGTTA TERM 1627 1891695 - 1891679 - R 100 -10.8 -5.27335 | opp_overlap 1891679 TTGCTTAAAGAAAAA CCCCGC TCATG GCGGGG TTTTGAGGCCGTTCG TERM 1628 1891679 - 1891695 + r 85 -11.5 -4.09739 | opp_overlap 1891679 TTGCTTAAAGAAAAA CCCCGCT CAT GGCGGGG TTTTGAGGCCGTTCG Smed_1809 1892714 - 1892013 - | FkbM family methyltransferase Smed_1810 1893345 - 1892794 - | hypothetical protein Smed_1811 1893493 - 1893332 - | hypothetical protein TERM 1629 1893532 - 1893518 - H 90 -10 -4.56597 | opp_overlap 1893517 1893518 CTTTTCCGGCAAAAA CCTGAC AGT GTCAGG CTTATAACAGGAAGT Smed_1812 1893940 - 1894554 + | hypothetical protein Smed_1813 1895058 - 1894543 - | hypothetical protein Smed_1814 1896558 - 1895059 - | hypothetical protein Smed_1815 1897745 - 1896639 - | hypothetical protein Smed_1816 1898098 - 1897745 - | hypothetical protein Smed_1817 1899693 - 1898095 - | hypothetical protein TERM 1630 1898152 - 1898181 + g 78 -6.4 -4.60487 | opp_overlap 1898136, overlap 1898152 1898153 GCGCCGCAGGCCATC G-GCGCCCTTGGCG ACAG CGTCG-GGGCGCAC TTTTTCCACCTCCTG Smed_1818 1900158 - 1899697 - | hypothetical protein Smed_1819 1901774 - 1900158 - | hypothetical protein TERM 1631 1900857 - 1900835 - G 74 -9.8 -3.70902 | overlap 1900838 GCCGCGAGACGGAAA CGAGCGACAG GGC CTGCCGGTCG CGCTGGAAGACCTGC Smed_1820 1902373 - 1901771 - | hypothetical protein Smed_1821 1903731 - 1902370 - | hypothetical protein TERM 1632 1903104 - 1903125 + g 75 -11.6 -3.6502 | opp_overlap 1903106 CTCCCGGCCTGTAAT CAGCCTCG AATGGC CGAGGCTG TTTGACTGGAGGATC Smed_1822 1904330 - 1903728 - | hypothetical protein Smed_1823 1904650 - 1904327 - | hypothetical protein Smed_1824 1905015 - 1904647 - | hypothetical protein TERM 1633 1904867 - 1904848 - G 83 -9.2 -4.35524 | TCCTGAAACGGAAAA GGGCGAGC CGAA GCCCACCC CTGGTTGATGATTCC Smed_1825 1905096 - 1905839 + | hypothetical protein Smed_1826 1906331 - 1906777 + | hypothetical protein Smed_1827 1907530 - 1906844 - | hypothetical protein TERM 1634 1907043 - 1907055 + g 71 -9.1 -3.75153 | TTGAACTTTTCGATC TGCGG ATG CCGCA TTTCGATTGCACGCG TERM 1635 1907469 - 1907450 - G 75 -4.2 -4.8048 | overlap 1907451 GCGGTAGAGGAAAAA TGCCGCCC CGCC GAACAGCA CGCCACTCAGGCTCG Smed_1828 1908327 - 1907668 - | hypothetical protein Smed_1829 1909328 - 1908615 - | hypothetical protein TERM 1636 1909561 - 1909590 + r 85 -15.2 -3.04461 | opp_overlap 1909565, overlap 1909565 TTCCCACCTCGGTGG TAAATGGGCGAG CCGAGA CTCGCCCATTTA TATTCAGCCTGCCTC TERM 1637 1909586 - 1909565 - R 77 -12.3 -3.53224 | opp_overlap 1909561 1909565 CACCTCGGTGGTAAA TGGGCGAGC CGAG ACTCGCCCA TTTATATTCAGCCTG TERM 1638 1909565 - 1909586 + r 88 -11.6 -4.19624 | opp_overlap 1909565, overlap 1909561 CACCTCGGTGGTAAA TGGGCGAG CCGAGA CTCGCCCA TTTATATTCAGCCTG Smed_1830 1910589 - 1909594 - | hypothetical protein Smed_1831 1911642 - 1910674 - | hypothetical protein TERM 1639 1910749 - 1910783 + g 76 -8.4 -4.2349 | overlap 1910753 CGCATCCTGGTTCTT GCGTGCCTGAGGGTTC GCC GGGCCCTTCGGCTTGC TTTTCGCTGTGGCCG Smed_1832 1912006 - 1911767 - | hypothetical protein TERM 1640 1911802 - 1911818 + g 71 -10.9 -3.40601 | opp_overlap 1911800, overlap 1911809 1911811 CGCAGGCAGAGGATT GTTCCTC GGC GAGGAAC TTGATCTTGCCTTTG Smed_1833 1912229 - 1912116 - | hypothetical protein Smed_1834 1912914 - 1912483 - | hypothetical protein TERM 1641 1912887 - 1912900 + g 75 -4.5 -4.73614 | opp_overlap 1912869, overlap 1912883 GTACGTATTTGGCAA TACGC AGCA GCGTG TTTCTTTTAATCATC Smed_1835 1913603 - 1912911 - | hypothetical protein TERM 1642 1913697 - 1913714 + r 83 -7.7 -4.56597 | gap 1 GGGCGACTATGGGTC GCTGTGCG AAC CGC-CAGC TTTTTCACAAAGAAG Smed_1836 1914088 - 1913678 - | hypothetical protein TERM 1643 1914029 - 1914004 - G 93 -3.2 -5.55769 | overlap 1914006 GTTCATAAGAAAAAA GATTGCCGTA GTACCA TTCGGCAAAC GTAAGCATGACGGCA Smed_1837 1915077 - 1914448 - | hypothetical protein TERM 1644 1914515 - 1914548 + g 91 -9.5 -4.52143 | overlap 1914493 GCGCGCTTCGACTGT CGAAGTTGCCGGTCA AGTT TGGTCGGCCACATCG TTTCTTGTATTTCGG Smed_1838 1917125 - 1915074 - | hypothetical protein Smed_1839 1918558 - 1917125 - | hypothetical protein Smed_1840 1918701 - 1919042 + | glutathione-dependent formaldehyde-activating GFA Smed_1841 1919225 - 1919070 - | hypothetical protein Smed_1842 1919514 - 1919966 + | putative signal peptide protein TERM 1645 1919978 - 1920011 + T 74 -13.7 -2.63073 | overlap 1919977 1919979 TTGATGCTATGCCCT TGCGGGCGGCGGGCG CTTC CGCATGCCGCCTGCC CTCTTCTTGCCGGAG Smed_1843 1920349 - 1919969 - | hypothetical protein Smed_1844 1920524 - 1920961 + | hypothetical protein Smed_1845 1921708 - 1921133 - | hypothetical protein TERM 1646 1921767 - 1921724 - R 74 -13.3 -2.53911 | gap 3, overlap 1921742 1921743 GCAAGTTTGAATCGA CGCGTCTCCAATCCGAAACCGC CTG GCGGGTTCGG---GGAGACGCG GAGGCGCATCGCCGG TERM 1647 1922193 - 1922211 + r 72 -8.8 -3.85698 | overlap 1922199 TTGCGGTTTCGTTGG GTTGGAGC GCC GCTCCGGC TTTCTGCAGAAGGCC Smed_1846 1922970 - 1922170 - | IstB ATP binding domain-containing protein TERM 1648 1922199 - 1922236 + g 100 -29.3 -4.07568 | opp_overlap 1922223 1922224, overlap 1922193 TTTCGTTGGGTTGGA GCGCCGCTCCGGCTTTC TGCA GAAGGCCGGAGCGGCGC TTTTCGCGAAGCCGA Smed_1847 1924259 - 1922970 - | integrase catalytic region Smed_1848 1924338 - 1925270 + | transposase IS116/IS110/IS902 family protein TERM 1649 1925564 - 1925598 + F 83 -12.3 -3.92373 | overlap 1925568 CTGCCTCGGACAGCG GCAAGCCCTATTGG-GC AGT GCACCGATAGGGC-TGC TTTATACATGCGATC TERM 1650 1925568 - 1925595 + F 76 -12.8 -3.02745 | gap 1, overlap 1925564 CTCGGACAGCGGCAA GCCCTATTGG-GC AGT GCACCGATAGGGC TGCTTTATACATGCG Smed_1849 1926154 - 1926354 + | putative transmembrane protein Smed_1850 1926367 - 1926501 + | hypothetical protein Smed_1851 1927126 - 1926722 - | BA14K family protein Smed_1852 1927936 - 1927331 - | hypothetical protein Smed_1853 1928591 - 1928076 - | chromosomal replication initiator DnaA domain-containing protein TERM 1651 1928397 - 1928366 - G 73 -11.4 -3.61398 | opp_overlap 1928389 1928390 1928392 CTCGGTCGGCAAGAA GGATGCGCGCCTGC GCCA GCAGCCGCGCTGCC GCATCGGCAAGATCG Smed_1854 1928687 - 1929412 + | putative phage repressor Smed_1855 1929631 - 1929960 + | hypothetical protein Smed_1856 1929960 - 1930238 + | putative signal peptide protein Smed_1857 1930983 - 1930258 - | pentapeptide repeat-containing protein TERM 1652 1930801 - 1930827 + g 100 -4.5 -5.46657 | gap 2, opp_overlap 1930791, overlap 1930806 AAGATTGCTTTCCGG CAGGTC--GCTGC CAC GCAGCATGATCTG TTTTTTGTTACAGTC Smed_1858 1932197 - 1931196 - | import inner membrane translocase subunit Tim44 TERM 1653 1931936 - 1931958 + g 74 -12.6 -3.35679 | opp_overlap 1931935 1931934, overlap 1931953 ATCCGCTGAAGAAGC CCGGGCGCGC ATT GCCCGTCCGG TTCTGGGTAGCCGGG TERM 1654 1932403 - 1932376 - R 76 -4.8 -4.8667 | gap 1 CAGATTGGAGAAAAA CCGGCCC-TCGTC ACG GATAATGGACCGG CGCGATGAATCCGAG Smed_1859 1933357 - 1932386 - | hypothetical protein Smed_1860 1933939 - 1933544 - | hypothetical protein TERM 1655 1934641 - 1934629 - H 77 -2.7 -5.07053 | AATTATTTGAAAAAA CAATA TAT CATTG TCTGCCAAACGCGGG Smed_1862 1934795 - 1935133 + | thioredoxin domain-containing protein TERM 1656 1935864 - 1935884 + F 93 -11.1 -4.52143 | GTCTTTGTCGCCTGG GTCAGCGTC GGT GACGCAGAC TTTCTTGTATTTGCC Smed_1863 1936118 - 1936855 + | necrosis-inducing protein Smed_1864 1937283 - 1938443 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1657 1938602 - 1938633 + T 100 -11.6 -5.29716 | CCCCAGCCTGTTACT GGTGCCCGCG TTTAATCGCCTT CGCGGGCACC TTTTTGTTGTGTTAA Smed_1865 1939555 - 1939190 - | hypothetical protein TERM 1658 1939658 - 1939687 + r 83 -12.1 -3.79882 | overlap 1939682 CACTCGCTCTGTGTC CAGGCGCGGGC GCCACACA GCCCGCGACTG TTTCGTCGATCTTGT Smed_1866 1940044 - 1939781 - | hypothetical protein TERM 1659 1940015 - 1939993 - G 74 -5.4 -4.57569 | overlap 1940011 GCATGCCGGTAAAAA CGAGGATGCC GCC GACAACCGCG CTAGCGGCCAAAGAG Smed_1867 1941012 - 1940044 - | chitinase-like protein TERM 1660 1940124 - 1940110 - G 74 -12.8 -3.29471 | CCTCCAGTAGAGGAA GCCGGC AAT GCCGGC GAACGCGATAAGGAT Smed_1868 1941196 - 1941414 + | hypothetical protein TERM 1661 1941460 - 1941425 - f 71 -11.8 -2.91452 | gap 1 AGTAGCCGAAGTACA GGCGCCGCC-CGCCACG CCT CGTAACATGGCGGCGGC TTAGACCCGTGACCC Smed_1869 1941627 - 1941818 + | hypothetical protein TERM 1662 1941897 - 1941867 - T 88 -15.5 -3.62849 | overlap 1941861 TTTATGAAAGCAGAA GGCCCCCTCTCTC TAGAC GAAAGAAGGGGCC GGGCGTCTGAGCGTT TERM 1663 1942026 - 1942042 + T 70 -5 -4.45485 | opp_overlap 1942016 AGGAACGCAGGATCG CCGCGC CGAGA GCACGG TTTTATCCATCTGAT Smed_1870 1942451 - 1942098 - | hypothetical protein Smed_1871 1942785 - 1942438 - | hypothetical protein Smed_1872 1943909 - 1942785 - | hypothetical protein TERM 1664 1943870 - 1943890 + g 71 -12.5 -3.07443 | overlap 1943889 CAACGGCGCTGCCGG CGGTCACGG AAA CCGTGCCCG TTACGTAGGGTATCG Smed_1873 1945435 - 1943921 - | hypothetical protein TERM 1665 1944769 - 1944797 + g 70 -10.3 -3.53811 | overlap 1944770 CGATTATCATCTTAT CGGATCGCAGAAC GAT GTTCTTCGATCCA TTTGGAGCCAATGGC TERM 1666 1944770 - 1944796 + g 72 -13.8 -2.72144 | overlap 1944769 GATTATCATCTTATC GGATCGCAGAAC GAT GTTCTTCGATCC ATTTGGAGCCAATGG Smed_1874 1948092 - 1945435 - | hypothetical protein TERM 1667 1946784 - 1946761 - G 76 -10.3 -3.83502 | overlap 1946765 TACCGCCAGACCAAA GCGACGGCT GACGGG AACCGTCGC CTTGCCGCCCATGCG Smed_1875 1948503 - 1948099 - | hypothetical protein Smed_1876 1948572 - 1948844 + | hypothetical protein Smed_1877 1949581 - 1948991 - | hypothetical protein TERM 1668 1949609 - 1949590 - R 78 -3.6 -4.9218 | gap 1, overlap 1949592 CACTCATGAGAAAAA CATC-TCCG TAG CGGAAAATG AGGCTTCGCGACCCG Smed_1878 1950231 - 1949578 - | hypothetical protein TERM 1669 1950148 - 1950110 - G 74 -9.3 -3.85698 | opp_overlap 1950111 TGCGCCTTCCAGAAA GGCGTGCCGGCGGCCTG CTCTT CGGAACGCCGGCCCTCC ATCATCGAAACGTCC Smed_1879 1950328 - 1950687 + | hypothetical protein Smed_1880 1952780 - 1950684 - | hypothetical protein TERM 1670 1952392 - 1952367 - G 80 -5.3 -4.88736 | gap 1 GAGCACCGACAAAAA GGCCGCACCTAG TCC CT-GGACCGGCC TCTCCATGGATGAAA Smed_1881 1952802 - 1953236 + | hypothetical protein TERM 1671 1953307 - 1953344 + T 87 -12.8 -3.89524 | gap 2, opp_overlap 1953306 1953303, overlap 1953315 TGGACAACCAAGTAT GG-G-GGGGAGCGAGCGC TCAA GCGCTCGCTTCTCGCACC TTTATCGCCTCGCAT TERM 1672 1953315 - 1953334 + T 87 -15 -3.32562 | opp_overlap 1953306 1953303, overlap 1953307 CAAGTATGGGGGGGA GCGAGCGC TCAA GCGCTCGC TTCTCGCACCTTTAT Smed_1882 1953559 - 1953323 - | hypothetical protein Smed_1883 1954056 - 1953655 - | hypothetical protein Smed_1884 1954556 - 1954071 - | hypothetical protein Smed_1885 1954983 - 1954558 - | hypothetical protein TERM 1673 1954891 - 1954851 - G 70 -12 -3.19246 | overlap 1954855 1954888 GGAACGCCAATCGAA GGTATTTC-GGCGGCAGCGG CTG CC-CTGCCGCCGGAAACACG ACGTTCGGCGCGGCT TERM 1674 1954886 - 1954855 - G 77 -15.2 -2.57013 | gap 1, overlap 1954851 CGCCAATCGAAGGTA TTTCGGCGGCAGCGG CTG CC-CTGCCGCCGGAA ACACGACGTTCGGCG Smed_1886 1955636 - 1955190 - | hypothetical protein Smed_1887 1956673 - 1955636 - | hypothetical protein Smed_1888 1957339 - 1956974 - | hypothetical protein Smed_1889 1957419 - 1957580 + | hypothetical protein Smed_1890 1958084 - 1957590 - | hypothetical protein TERM 1675 1957992 - 1957975 - G 75 -4 -4.81212 | opp_overlap 1957977, overlap 1957970 TCGATCACAAGAAAA CCCCGC TGACGT GCGGCG GTCTTCTGGGCATCG TERM 1676 1958106 - 1958127 + r 73 -11.5 -3.34522 | opp_overlap 1958107, overlap 1958107 1958107 CTCCGATGGAATAGA ACCTGGCGC CTAG GCGCCAGGC TTGGTTGCCAGATCT TERM 1677 1958126 - 1958107 - R 95 -15 -3.68988 | opp_overlap 1958106 1958107 1958107 TCCGATGGAATAGAA CCTGGCGC CTAG GCGCCAGG CTTGGTTGCCAGATC TERM 1678 1958107 - 1958126 + r 81 -15 -2.60392 | opp_overlap 1958107, overlap 1958106 1958107 TCCGATGGAATAGAA CCTGGCGC CTAG GCGCCAGG CTTGGTTGCCAGATC Smed_1891 1958570 - 1958115 - | hypothetical protein Smed_1892 1959537 - 1958584 - | hypothetical protein Smed_1893 1959989 - 1959552 - | hypothetical protein Smed_1894 1961131 - 1959989 - | hypothetical protein TERM 1679 1961169 - 1961150 - R 85 -11.4 -3.95435 | TGCCTCAAAAGAGAA GCCGCCCT AGTG AGGACGGC AATGGCAATTCGAAC Smed_1895 1962903 - 1961527 - | HI1409 family phage-associated protein Smed_1896 1964243 - 1962912 - | hypothetical protein Smed_1897 1964747 - 1964247 - | phage terminase small subunit Smed_1898 1964870 - 1965241 + | hypothetical protein Smed_1899 1965566 - 1965411 - | hypothetical protein TERM 1680 1965712 - 1965736 + r 75 -12.1 -3.26998 | opp_overlap 1965710, overlap 1965706 1965714 1965717 ATCAACTATGACAGG CCCCGGTGAGG GAA CTTCACCGGTG TTGCCTTGCTTTGCT TERM 1681 1965714 - 1965734 + r 82 -13.3 -3.19205 | opp_overlap 1965710, overlap 1965712 1965706 1965717 CAACTATGACAGGCC CCGGTGAGG GAA CTTCACCGG TGTTGCCTTGCTTTG Smed_1900 1966132 - 1965953 - | hypothetical protein TERM 1682 1966178 - 1966155 - R 93 -12.4 -4.27316 | CTCCTCAAGCGAAAA CCCGCCCCTG CGAA CAGAGACGGG CTGGCAATGTCAGAA Smed_1901 1967202 - 1966225 - | hypothetical protein TERM 1683 1966687 - 1966671 - G 71 -10.9 -3.39556 | overlap 1966669 1966674 AATCCTCGAACAAGA CAATGCC CTT GGCATTG ACATCCCCCGCGGCC TERM 1684 1966796 - 1966829 + g 100 -15.3 -5.15117 | opp_overlap 1966790 ATCTTGAAAGCGGTG GCGGCGACAAGATCT TCGA AGTTCCTGTCGCCGC TTTTTTCCAGTTTTG Smed_1902 1968174 - 1967278 - | hypothetical protein Smed_1903 1968516 - 1968767 + | acyl carrier protein Smed_1904 1969523 - 1968906 - | hypothetical protein Smed_1905 1969954 - 1969520 - | GcrA cell cycle regulator Smed_1906 1970505 - 1969951 - | hypothetical protein Smed_1907 1971289 - 1970537 - | hypothetical protein Smed_1908 1971669 - 1971289 - | hypothetical protein Smed_1909 1971866 - 1971666 - | hypothetical protein Smed_1910 1972129 - 1971863 - | hypothetical protein TERM 1685 1971987 - 1971968 - G 93 -2.8 -5.54264 | gap 1, overlap 1971969 AAAGAGCCAAAAAAA CCCGG-GGA AGT TCCACCAGA GGAAACGCCCGATTC Smed_1911 1972773 - 1972126 - | hypothetical protein Smed_1912 1972866 - 1973111 + | hypothetical protein Smed_1913 1973296 - 1973114 - | hypothetical protein Smed_1914 1974060 - 1973293 - | hypothetical protein TERM 1686 1973544 - 1973530 - G 78 -6.4 -4.58395 | overlap 1973531 GGTAGCCTTGAAAAA CGGTTC GCC GAACCA CCACGGCTGGACGGT Smed_1915 1974461 - 1974057 - | hypothetical protein TERM 1687 1974967 - 1974952 - R 71 -8.2 -4.03234 | overlap 1974936 1974965 GGTCTTGGAGACAAA GGCCGC GACA GCAGCC GAGACTTCGACGCGC Smed_1916 1975880 - 1975071 - | hypothetical protein TERM 1688 1975324 - 1975364 + g 93 -13.4 -4.18018 | gap 1 CCTCGAAGCACGTCG CGGTCCATCCCGTTTGCCT CTTC AGGCGAATGGGATGC-CCG TTTTACGTCCGGGCC Smed_1917 1976155 - 1975877 - | hypothetical protein TERM 1689 1976282 - 1976269 - g 77 -4.5 -4.82901 | gap 1, opp_overlap 1976271 1976281, overlap 1976270 1976271 TGGCTTGCAGAAAAA CTCGCG GCT CGCG-G CGTGGCTTCGAAACT Smed_1918 1976224 - 1976940 + | putative phage repressor Smed_1919 1977048 - 1977281 + | hypothetical protein Smed_1920 1977344 - 1977973 + | hypothetical protein TERM 1690 1978091 - 1978062 - T 70 -4.2 -4.62471 | CTGAAGGGTGAAAAA GACCAGCACCTG TATTGG CTATTGCTGGTC GCCAGTCACACCCTT Smed_1921 1978906 - 1978160 - | phage Gp37Gp68 family protein TERM 1691 1978196 - 1978216 + g 71 -4.6 -4.48713 | GTCCCAGGTGCGTCC GCGATAGG AACGC CCCGTCGC TTTCTTGTTCCTGCC Smed_1922 1979155 - 1979388 + | hypothetical protein Smed_1923 1979385 - 1979645 + | hypothetical protein TERM 1692 1980342 - 1980318 - g 76 -10.7 -3.8062 | overlap 1980340 GAAGCTGGACAAGAA GGCTTTGGCCG CCG CGATCAAAGCC GGCGAGCAAGTGCCC Smed_1924 1979881 - 1980408 + | siphovirus Gp157 family protein TERM 1693 1981346 - 1981332 - g 80 -5.6 -4.74103 | overlap 1981334 1981335 TCTGGAACTGAAAAA GAGGCT CGA AGCCGC AATCGCGCGTGCCCC Smed_1925 1980412 - 1981419 + | phage recombination protein Bet Smed_1926 1981421 - 1981942 + | hypothetical protein Smed_1927 1981939 - 1982679 + | hypothetical protein Smed_1928 1982676 - 1983188 + | hypothetical protein Smed_1929 1983185 - 1983376 + | hypothetical protein Smed_1930 1983373 - 1983657 + | hypothetical protein Smed_1931 1983662 - 1984828 + | hypothetical protein TERM 1694 1984830 - 1984846 + T 74 -8.1 -4.15044 | opp_overlap 1984837 1984838 AGAACGGAACGTGAA TTGGAAA CCG TTTCCAA TTTCTTGGAAACCAG TERM 1695 1984886 - 1984858 - T 71 -10.3 -3.54459 | overlap 1984838 1984837 1984861 1984874 CCAATTTCTTGGAAA CCAGTCATCCGGA AAC TCCGGACAACTCG GAAATTGCACAATGA TERM 1696 1985020 - 1984989 - T 73 -12.9 -2.76189 | opp_overlap 1984987, overlap 1984986 CAACTGAGCTAATCA CCCGCCGGACCGC TTTGCT GCGGTCTGGTGGG GCGTATAATGGCGTT Smed_1932 1985997 - 1985080 - | PhzF family phenazine biosynthesis protein TERM 1697 1985279 - 1985252 - G 81 -4.1 -5.00884 | overlap 1985253 1985256 1985268 1985269 AGGCCGTCGAAAAAA TTGACGGC-GCCC GAAA GGGCGGCCG-CAG CCGAACCGGTCGCCG TERM 1698 1986181 - 1986151 - R 76 -4.4 -4.74103 | opp_overlap 1986156 GCGGCAAGGCAAAAA GCCGCCGGCGGGCC TCC GTCACGCCATCTGC TGCCCCCGGATGCGC Smed_1933 1986918 - 1986169 - | NUDIX hydrolase Smed_1934 1988027 - 1986921 - | endonuclease/exonuclease/phosphatase TERM 1699 1987846 - 1987811 - G 71 -8.4 -3.96216 | gap 1 CCTGCAGGCAAAGAA TGTCCGCATC-GCAATC GGC GATCGCCAATGCCGACA TCTGCCGGACATCAT Smed_1935 1988584 - 1988141 - | putative signal peptide protein Smed_1936 1988966 - 1988598 - | hypothetical protein TERM 1700 1989315 - 1989299 - R 76 -5.1 -4.77036 | CTGGAGGACGAAAAA TGGCG TAACCGT CGCCA CCGAAAGTCTTCATT Smed_1937 1989456 - 1989343 - | putative signal peptide protein Smed_1938 1989847 - 1989467 - | putative signal peptide protein TERM 1701 1989555 - 1989567 + g 71 -9.1 -3.72576 | GTTGCAGCACTCAGG GCGTC GAC GACGC TTTCCTGAGGCAGCG TERM 1702 1990299 - 1990327 + r 100 -12.4 -4.8622 | gap 1 TTCGCCGCGAATTTC CAGGACCCGCTCG CTGA CG-GCGGGCCCTG TTTTTGCTTAGGCAC Smed_1939 1992097 - 1990358 - | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 1703 1990912 - 1990938 + g 84 -15.8 -3.28712 | AGGCGCCCGCGGCAC CGACAGCGGCGG ACT CCGTCGCAGTCG TTATGCCGAACAGGA Smed_1940 1992758 - 1992090 - | tripartite ATP-independent periplasmic transporter DctQ Smed_1941 1993973 - 1992834 - | TRAP dicarboxylate transporter- DctP subunit TERM 1704 1993999 - 1994019 + H 74 -12.5 -3.01791 | opp_overlap 1993988 CAAATTGCGCGCGCG TCCCCCCCG TCC CGGGGCGGA TCTTCACGCAAGCAT TERM 1705 1994066 - 1994083 + H 74 -2.5 -4.95484 | opp_overlap 1994049, overlap 1994049 CACTAGCATCGTCCG GAGACGC CGCT GCGCCCC TTTTCTTTCATGCTG TERM 1706 1995907 - 1995873 - g 93 -13.6 -4.12456 | gap 1, opp_overlap 1995868, overlap 1995864 ACATGACCGCGAAAA CGGCCCGC-GCCGAA TTCTAC TTCGGCAGCGTGCCG GCCATGTCCGAGAAA Smed_1942 1994093 - 1995973 + | TPR repeat-containing protein Smed_1943 1997051 - 1996014 - | cell division protein FtsZ Smed_1944 1997604 - 1997798 + | hypothetical protein Smed_1945 1998631 - 1997879 - | HAD family hydrolase TERM 1707 1998143 - 1998103 - G 73 -8.1 -4.08767 | opp_overlap 1998087, overlap 1998104 CGCACGTTCTCAAAA GCGCGTGGTCGTTCTCGGC GTC GCCGACACCCACCACGCTG ACAAAGGAGAGCCCC TERM 1708 1998942 - 1998892 - R 74 -2.4 -5.01732 | opp_overlap 1998904 AATTGCGGCAAAAAA GGGGTTGGAGAGTTTCCGCGATTC GGA GAAAAGCGGAAATGCTCTAAAGCC GCCAGCCCCCACTGA Smed_1946 1999996 - 1998935 - | ABC transporter related Smed_1947 2001663 - 1999984 - | binding-protein-dependent transport systems inner membrane component TERM 1709 2000236 - 2000218 - G 75 -13.8 -3.04188 | overlap 2000211 GACGAGAATGACAGA GGCACCCG CTG CGGGCGCC ACCAGCGGCAGCAGC TERM 1710 2001180 - 2001141 - G 70 -9.8 -3.53811 | opp_overlap 2001133, overlap 2001117 2001142 GCGAGGCGCCGGAAA GCCGCGCCGCCTCCACGC CGTC GCGCGGATGCGTCGCAAG TCCGGCCTTGATTGC Smed_1948 2003008 - 2002028 - | extracellular solute-binding protein TERM 1711 2002408 - 2002439 + g 70 -7.8 -4.07568 | opp_overlap 2002408 CGACGGACTTCAACA CGCCGCCATTGCCG CCGG CGGCCGTCGCGCCG TTTTCCGCGAGCGCC Smed_1949 2003371 - 2003580 + | cold-shock DNA-binding domain-containing protein TERM 1712 2003682 - 2003701 + F 100 -8.5 -5.32944 | opp_overlap 2003682 CGGCGCTCAAGAGGA GGTCGGG GTAACG CCCGGCC TTTTTTGCTTGTGGC Smed_1950 2003749 - 2004036 + | hypothetical protein TERM 1713 2004285 - 2004262 - g 77 -2.2 -5.00616 | overlap 2004264 CTCGCGCGCAAAAAA CTGCAGCGCG AAGG CTTGCTGCCG GCGCCGAAGAAAGTC Smed_1951 2004079 - 2004315 + | 30S ribosomal protein S21 TERM 1714 2004359 - 2004380 + T 100 -17.3 -4.4084 | AGCCGACAGTTCTCG CGACGCGCC CCTT GGCGCGTCG TTTTCATATCTCGTT Smed_1952 2004961 - 2004476 - | membrane-bound metal-dependent hydrolase TERM 1715 2005784 - 2005798 + G 71 -8.5 -3.93658 | CTTCCAGCGCGCACT GGCCG AAGCC CGGCC TTATTTCCCGCTGTT Smed_1953 2005176 - 2005850 + | glutathione S-transferase domain-containing protein Smed_1954 2005887 - 2006936 + | aldo/keto reductase Smed_1955 2008206 - 2006980 - | GntR family transcriptional regulator TERM 1716 2008857 - 2008871 + G 72 -7.8 -4.1822 | CAAGGCAGAGGGTCG CGACTG CTT CGGTCG TTTCTTCAACTACCC Smed_1956 2008417 - 2009022 + | methyltransferase type 12 Smed_1957 2010119 - 2009769 - | hypothetical protein Smed_1958 2010855 - 2010166 - | ErfK/YbiS/YcfS/YnhG family protein Smed_1959 2011796 - 2010852 - | substrate-binding region of ABC-type glycine betaine transport system Smed_1960 2012902 - 2011949 - | putative adenylate/guanylate cyclase Smed_1961 2013109 - 2013363 + | putative signal peptide protein TERM 1717 2013378 - 2013412 + T 100 -18.1 -4.4078 | gap 1, opp_overlap 2013387, overlap 2013382 AGCGCTGCAATTCCT GAACGGAAAGCCGGAG CGCG CTCCGGCTTTCC-TTC TTTTCATTGAAGGCA TERM 1718 2013382 - 2013409 + T 100 -20 -4.32402 | opp_overlap 2013387, overlap 2013378 CTGCAATTCCTGAAC GGAAAGCCGGAG CGCG CTCCGGCTTTCC TTCTTTTCATTGAAG TERM 1719 2013404 - 2013387 - T 84 -12.7 -3.75332 | opp_overlap 2013382 2013378 ATTCCTGAACGGAAA GCCGGAG CGCG CTCCGGC TTTCCTTCTTTTCAT Smed_1962 2014451 - 2013432 - | ketol-acid reductoisomerase Smed_1963 2015158 - 2014511 - | TetR family transcriptional regulator Smed_1964 2016170 - 2015580 - | transglutaminase family protein cysteine peptidase BTLCP Smed_1965 2016341 - 2017039 + | putative glycine-rich protein TERM 1720 2017301 - 2017324 + F 100 -11.6 -4.89477 | ACGGAAACTCTCGAA GGGCGGCTCC CGCA GGTGTCGCCC TTTTCTTCTTCGGCA Smed_1966 2017427 - 2018185 + | putative transmembrane protein Smed_1967 2019124 - 2018225 - | aminoglycoside phosphotransferase Smed_1968 2020576 - 2019308 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Smed_1969 2021120 - 2020602 - | AsnC family transcriptional regulator TERM 1721 2021381 - 2021409 + G 70 -10.4 -3.5393 | gap 1, overlap 2021377 CGCGGTAAACTGCAT TCCGCGGAAGTGC TTCT GCA-TTCCGTGGA TTTCCAAGGGATCGT Smed_1970 2021273 - 2021992 + | aspartate racemase TERM 1722 2022089 - 2022112 + T 71 -10.3 -3.60627 | gap 1 GAGACGCTTCATGCC GGCGCGT-CG AACGC CGTACGCGCC TTTCGGATCGCGTCG Smed_1971 2022486 - 2022082 - | HxlR family transcriptional regulator Smed_1972 2022647 - 2023534 + | NmrA family protein TERM 1723 2023585 - 2023550 - T 79 -14 -3.17212 | gap 1, opp_overlap 2023583 TCAGGAGCTCAGCAA GAGGACCTCGG-CGAAC CTG GTTCGGCCGGGGCCCCC TTGGCCCAAGGGTGT Smed_1973 2024056 - 2023637 - | hypothetical protein Smed_1974 2025802 - 2024258 - | GntR family transcriptional regulator TERM 1724 2025495 - 2025464 - G 70 -12.2 -3.14132 | gap 1, opp_overlap 2025466 2025467 GCGGCCCTCGACCAA GCCGCGCCGAC-GCG CTT CGTTGTAGGCGCGGC TGACGGTGGTAAAGT Smed_1975 2025958 - 2026464 + | hypothetical protein Smed_1976 2028414 - 2026582 - | carbamoyltransferase Smed_1977 2028576 - 2028427 - | hypothetical protein Smed_1978 2029050 - 2028619 - | hypothetical protein TERM 1725 2028752 - 2028741 - G 75 -3.6 -4.85599 | GCCATTTCAGAAAAA CGCC GAGG GGCA CGAATGCCACCGAGT TERM 1726 2030514 - 2030528 + G 72 -7.8 -4.16279 | opp_overlap 2030503 AAAGCAACTCACCGA GAGCTG GGG CGGCTC TTTTACACTGGTCTA Smed_1979 2029480 - 2030823 + | hypothetical protein Smed_1980 2031557 - 2030877 - | two component LuxR family transcriptional regulator Smed_1981 2033754 - 2031739 - | acyltransferase 3 TERM 1727 2033548 - 2033529 - G 73 -6.3 -4.32034 | overlap 2033530 2033541 CCACGACGACGAAAA GCGCCGG CAATAT CCGGCGG GCACGCCGCTCGTAG Smed_1982 2034734 - 2033982 - | pyridoxal phosphate biosynthetic protein PdxJ Smed_1983 2034932 - 2035639 + | protein of unknown function DUF899 thioredoxin family protein Smed_1984 2035869 - 2036975 + | hypothetical protein Smed_1985 2037285 - 2037527 + | 17 kDa surface antigen Smed_1986 2037542 - 2037910 + | putative signal peptide protein TERM 1728 2037923 - 2037888 - T 88 -15.5 -3.48772 | gap 1 AATCGGCCGACAGAA GCGGCGACGGCAGCCT GCAGT AAGCC-CCGTCGCCGC ACAGACAACCATCAG Smed_1987 2038630 - 2037935 - | hypothetical protein Smed_1988 2039836 - 2038652 - | hypothetical protein Smed_1989 2040647 - 2039871 - | TfuA domain-containing protein TERM 1729 2040260 - 2040250 - G 80 -4.6 -4.84642 | GTCAAAGGAAGAAAA CCGA GTT CCGG CGGTCCCGAAAGCAC Smed_1990 2041884 - 2040655 - | hypothetical protein Smed_1991 2044939 - 2041868 - | adenylyl cyclase class-3/4/guanylyl cyclase TERM 1730 2043103 - 2043119 + g 76 -5.7 -4.6038 | opp_overlap 2043104, overlap 2043104 2043105 CGCCCGTATCAATCC ATGCGGC GAT GCCGCGA TTTTGGTTTACTGTC TERM 1731 2043850 - 2043864 + g 77 -12.8 -3.55563 | opp_overlap 2043850 2043847 CCAATGCACGAAGCA GGGCGC GAT GCGCCC TTTCGCGGATCGCCT TERM 1732 2044706 - 2044678 - G 78 -6.5 -4.62069 | GCTCGATCGGAAAAA GCGCAACGCCGCC ATC GCCGGCCTCGTGC TGCATCACGCCCGAA TERM 1733 2044861 - 2044914 + g 95 -12.7 -4.26344 | gap 3, opp_overlap 2044874, overlap 2044875 2044876 TGCGCCGCTCGCCTC CACGCACGGAAGAGCCGCCCGAGCCT TGTCC ACGCTCGGGCG-CT-TTTCGTG-GTG TTTTGGTCCGGCTAT TERM 1734 2044875 - 2044903 + g 85 -10.2 -4.37971 | opp_overlap 2044874, overlap 2044861 2044876 CCACGCACGGAAGAG CCGCCCGAGCCT TGTCC ACGCTCGGGCGC TTTTCGTGGTGTTTT TERM 1735 2044876 - 2044902 + g 76 -13.7 -3.21156 | opp_overlap 2044874, overlap 2044875 2044861 CACGCACGGAAGAGC CGCCCGAGCCT TGTCC ACGCTCGGGCG CTTTTCGTGGTGTTT Smed_1992 2045020 - 2045265 + | hypothetical protein TERM 1736 2045707 - 2045721 + G 89 -12.8 -4.15044 | CTGCTCGTCATCTTG GCCGGC AGT GCCGGC TTTCTTCGCAAAACC TERM 1737 2047135 - 2047125 - g 71 -8.2 -3.90744 | opp_overlap 2047093, overlap 2047126 TCGGTTCGCAAACAA GGCG GAG CGCC ATGAGGCGGCGCGGC Smed_1993 2045368 - 2047260 + | putative suppressor Smed_1994 2048435 - 2047308 - | exodeoxyribonuclease V TERM 1738 2047998 - 2047968 - G 73 -11 -3.57144 | overlap 2047971 2047985 TTCCTGATTGGTAAA GTAGCCGCCACCGG AAA CCGGCGGGAGCTGC CCGGGATCGCCGAGA Smed_1995 2048687 - 2049775 + | putative ammonia monooxygenase Smed_1996 2049948 - 2050322 + | hypothetical protein Smed_1997 2050306 - 2050860 + | ECF subfamily RNA polymerase sigma-24 factor Smed_1998 2050857 - 2051666 + | putative transmembrane anti-sigma factor Smed_2000 2052706 - 2052047 - | nitrile hydratase Smed_2001 2053344 - 2052703 - | nitrile hydratase, alpha subunit Smed_2002 2054020 - 2053427 - | lysine exporter protein LysE/YggA TERM 1739 2053970 - 2053922 - G 89 -13.1 -4.10953 | ACGCACGAAACCAAA GTTCACGCCCGAGGCAAACAGCA TCA TGTTGTTCGGCCCCGGCGTGATC GACGTCGTGAAGGCG Smed_2003 2054300 - 2055034 + | methyltransferase type 11 Smed_2004 2055284 - 2055060 - | hypothetical protein TERM 1740 2055339 - 2055321 - R 100 -9.5 -5.4833 | opp_overlap 2055321 TCAGCCAATAAAAAA GGCCGGG ACAGA CCCGACC TTCCTCATCATCTCA Smed_2005 2055651 - 2055442 - | cold-shock DNA-binding domain-containing protein TERM 1741 2055713 - 2055698 - H 73 -3.2 -4.85599 | opp_overlap 2055698 GCCACCGCATAAAAA CGGTGT ATCA AAACCG ATGTTGTCAGGATTT Smed_2006 2055970 - 2056815 + | aldo/keto reductase ilvH 2057472 - 2056900 - | acetolactate synthase 3 regulatory subunit Smed_2008 2059273 - 2057495 - | acetolactate synthase 3 catalytic subunit TERM 1742 2059350 - 2059335 - H 100 -8.2 -5.66684 | opp_overlap 2059335 GAAGGCATAAAAAAA GGCCCC GTCA GGAGCC TCGTTCAGCGCATGG TERM 1743 2061376 - 2061358 - g 79 -8.8 -4.30576 | TGTGCACGAGGAAAA CGGCTTGC GGG GCAATCCG GAGATCGAACGCTTC Smed_2009 2059571 - 2061559 + | hypothetical protein Smed_2010 2061670 - 2062032 + | hypothetical protein miaA 2063003 - 2062086 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1744 2062694 - 2062682 - G 71 -4.7 -4.41348 | overlap 2062683 GCGCCTTGAAATAAA GGCCG GTG CCGCC GACGAAAACGGGCAT Smed_2012 2063005 - 2063892 + | phosphoserine phosphatase SerB Smed_2013 2063889 - 2064464 + | GCN5-related N-acetyltransferase Smed_2014 2066150 - 2064642 - | protease Do Smed_2015 2066744 - 2066358 - | amino acid-binding ACT domain-containing protein Smed_2016 2066936 - 2066751 - | hypothetical protein TERM 1745 2066896 - 2066864 - G 73 -7 -4.26076 | gap 1, overlap 2066869 CCAGTTCCACCAAAA CCAAAGGGGCCAGTG CGTA CACCAGCCCC-TCGA TGATCAGGAAAAAAG TERM 1746 2066892 - 2066869 - G 86 -12.4 -4.23781 | overlap 2066864 TCCACCAAAACCAAA GGGGCCAGTG CGTA CACCAGCCCC TCGATGATCAGGAAA TERM 1747 2066943 - 2066911 - G 87 -5.5 -5.19212 | opp_overlap 2066911 2066919 ATGATCAGGAAAAAA GCAAACCCGGTCAGA AAG TCTGACATCGTTCGC TTAATCTGTGGTGGT Smed_2017 2067876 - 2066944 - | HflC protein Smed_2018 2068961 - 2067873 - | HflK protein Smed_2019 2069719 - 2069156 - | dihydrofolate reductase Smed_2020 2070317 - 2069712 - | glutathione S-transferase domain-containing protein TERM 1748 2069916 - 2069858 - G 91 -9.6 -4.4078 | opp_overlap 2069893 2069894 CGCTTGCAAGCAAAA GATCGGCGGCGCTCATG-GACTCACCGA GCAGA TAGGTGTGCCGCGTGAGCGCCTC-GATC ACATGCGCGCACATT TERM 1749 2070070 - 2070039 - G 75 -13.6 -3.03214 | gap 1 AAGCCACGACAGATA GGCGCCGCGCTCGGG GTG CCCGGGCG-GGCGGC TGAGGCTGCAGTCGG thyA 2071229 - 2070435 - | thymidylate synthase Smed_2022 2071551 - 2071333 - | hypothetical protein Smed_2023 2071843 - 2071601 - | hypothetical protein Smed_2024 2072060 - 2071854 - | hypothetical protein Smed_2025 2072563 - 2072252 - | hypothetical protein Smed_2026 2072888 - 2072580 - | hypothetical protein TERM 1750 2073185 - 2073165 - H 79 -5.4 -4.72272 | opp_overlap 2073165 CGCCTCCACCAAAAA CCGGTC GGAATTCGA GACCGG CTTTTGATGGGGGCG Smed_2027 2073606 - 2074121 + | hypothetical protein Smed_2028 2074161 - 2074376 + | hypothetical protein Smed_2029 2074447 - 2074701 + | hypothetical protein Smed_2030 2078473 - 2074733 - | hypothetical protein TERM 1751 2076291 - 2076271 - G 71 -6.1 -4.26188 | GCGACAGATCGAAAA CACCGTTTG CTG CAAGCGATG TCCGCTCCGTGGTGA TERM 1752 2076785 - 2076767 - G 73 -8.1 -4.07885 | CATCCGGCCGGAAAA TGCGAGC TGTGC GCCCGCA AGTGCCCGGATCGCG Smed_2031 2080016 - 2078538 - | D-lactate dehydrogenase (cytochrome) TERM 1753 2079404 - 2079426 + g 71 -4.9 -4.46615 | gap 2, overlap 2079407 CGCGCCCGCCCGCCA CG-ACT-GCCG TCA CGGCGAGTACG TTTTCCTTCATCGTG Smed_2032 2080474 - 2080908 + | hypothetical protein Smed_2033 2084079 - 2080945 - | acriflavin resistance protein TERM 1754 2082460 - 2082448 - G 70 -10.5 -3.61398 | GGCGGCGGTGAAGAA CGCCG CAA CGGCG AAGACGATGAGCGGT TERM 1755 2082768 - 2082814 + g 76 -9.3 -4.07568 | overlap 2082771 CGAGGGTACCGTGAA CGGCG-GCGGCGCGCGGACCGAG CCC TTCGGCCCG-GCGGCGCACGATG TTTTCGAGCACCACG Smed_2034 2085287 - 2084076 - | RND family efflux transporter MFP subunit TERM 1756 2084411 - 2084451 + g 75 -11.7 -3.59698 | overlap 2084412 CCGGATTCTCGAGTC TTGCCCGGACCCTGAGCGT TCG GCTCTCCGGGTCCAGGCGG TTGTCTATCGCATGA TERM 1757 2085267 - 2085220 - G 76 -9.1 -4.07568 | gap 2 GCTCCGGGTGCAAAA CGCACCCAG-GCCG-CGCCCCCG ACGG CGAGGACGACGACGCTGATCGCG AGCTGATTCCAAAAG TERM 1758 2085345 - 2085308 - H 100 -11.9 -5.26119 | opp_overlap 2085307 2085306, overlap 2085310 TCTCCAAAAAGAAAA GCGCGCTCCAACGGGTG CGCA CACCCGATGGAACGTCC CGATTTGTGCGGATT TERM 1759 2085343 - 2085310 - H 73 -13.1 -2.83668 | opp_overlap 2085307 2085306, overlap 2085308 TCCAAAAAGAAAAGC GCGCTCCAACGGGTG CGCA CACCCGATGGAACGT CCCGATTTGTGCGGA Smed_2035 2085609 - 2086430 + | cyclase family protein Smed_2036 2086450 - 2086881 + | alkylhydroperoxidase TERM 1760 2087963 - 2087942 - g 75 -11.7 -3.5486 | overlap 2087940 GAGCGCAAGCAAACA GCAGCAAAT AAAT ATTTGCTGC GTCGGCGATGACGAC TERM 1761 2088367 - 2088377 + G 73 -8.2 -4.07885 | ACTATCGCGTTATCG GCGG TCC CCGC TTTTACGAGCGGATG Smed_2037 2086986 - 2089538 + | UvrD/REP helicase Smed_2038 2090751 - 2089642 - | oxidoreductase domain-containing protein TERM 1762 2090393 - 2090405 + g 74 -10.5 -3.68351 | opp_overlap 2090382 AGCACGTGCTTGCCT GCGCG AAG CGCGC TTTCGATCATGGGCG Smed_2039 2091126 - 2092163 + | regulatory protein LacI Smed_2040 2092186 - 2093262 + | hypothetical protein Smed_2041 2093525 - 2094469 + | ABC transporter binding protein Smed_2042 2094538 - 2095524 + | monosaccharide-transporting ATPase Smed_2043 2095527 - 2096294 + | ABC transporter related Smed_2044 2096901 - 2096440 - | GCN5-related N-acetyltransferase Smed_2045 2097650 - 2096979 - | phosphoribosyltransferase TERM 1763 2097317 - 2097302 - G 83 -11.8 -4.03234 | opp_overlap 2097301 2097302, overlap 2097303 GGTCGCCGAGATAAA GCGCGC GGCG GCGCGC GAGTTCATGCCTTTG TERM 1764 2098335 - 2098358 + G 75 -12.4 -3.54784 | overlap 2098330 TCGTCCCACTTCACG GCCGAGCGAT CGGG ATCGCCCGGC TTCATTCTGTTCGAT TERM 1765 2098577 - 2098524 - g 71 -13.2 -3.08464 | gap 1, opp_overlap 2098523 2098527, overlap 2098527 GGAGCACTCATGGAA GAAGGCGAGCAGATCTTCGCCGAGT GCCTG ACCCGCCGAAGGCCGGCT-GCCTTC CTGTTGCTCGACCTC TERM 1766 2098574 - 2098527 - g 71 -9.1 -3.68569 | gap 1, opp_overlap 2098523 2098527, overlap 2098524 GCACTCATGGAAGAA GGCGAGCAGATCTTCGCCGAGT GCCTG ACCCGCCGAAGGCCGGCT-GCC TTCCTGTTGCTCGAC Smed_2046 2097741 - 2099057 + | diguanylate cyclase Smed_2047 2099167 - 2099664 + | CreA family protein TERM 1767 2099741 - 2099701 - T 90 -11.2 -4.2828 | gap 2, overlap 2099704 2099706 2099710 CGCTACGGATCAAAA CGACAGGAAGGGGAGCACGG GTT CCGCACTCCCCTTCCGG--G TTACAGCGCCGCGCT TERM 1768 2099740 - 2099704 - T 100 -20.9 -3.14218 | overlap 2099701 2099706 2099710 TACGGATCAAAACGA CAGGAAGGGGAGCACGG GTT CCGCACTCCCCTTCCGG GTTACAGCGCCGCGC TERM 1769 2099738 - 2099706 - T 100 -22.1 -3.12521 | overlap 2099704 2099701 2099710 CGGATCAAAACGACA GGAAGGGGAGCACGG GTT CCGCACTCCCCTTCC GGGTTACAGCGCCGC TERM 1770 2099734 - 2099710 - T 89 -15.7 -3.37531 | overlap 2099706 2099704 2099701 TCAAAACGACAGGAA GGGGAGCACGG GTT CCGCACTCCCC TTCCGGGTTACAGCG Smed_2048 2100224 - 2099865 - | putative signal peptide protein TERM 1771 2100123 - 2100078 - G 73 -13.1 -3.22951 | overlap 2100076 GAGACCCTGATAATA GCTATCCGCGAAGGCCGGCGC AGCG GCGCCGACCAAGGCGGATGAC AGGGCAAATGCAGCA TERM 1772 2100430 - 2100397 - R 71 -13.1 -2.60075 | overlap 2100396 CCTCCGTGAATGAAG GGCGAACCATCGCCT CTCG AGGCGGTGGTCCGCA AGAGCGCAACGCGCT Smed_2049 2100864 - 2100466 - | putative signal peptide protein TERM 1773 2101112 - 2101097 - R 90 -11.8 -4.18018 | opp_overlap 2101081 CCGGCTCATGCAAAA GCCCGC TTTC GCGGGC CTCTACGAAAAGAAA Smed_2050 2101652 - 2101188 - | putative CheW protein TERM 1774 2101517 - 2101552 + g 71 -8.2 -3.89346 | gap 1 GGACATAGGGAGGGG TGTGCGGCATCGGCGTC ACC GGCGCCCA-GCCGCGAA TTTCTCGGATCGCCA Smed_2051 2103808 - 2101655 - | methyl-accepting chemotaxis sensory transducer Smed_2052 2103990 - 2104148 + | putative signal peptide protein Smed_2053 2104296 - 2104895 + | electron transport protein SCO1/SenC TERM 1775 2104918 - 2104947 + F 80 -10 -3.99405 | gap 1 CGCCGTCACGACTCC CGCGA-GCGTCGG AAAAG CCGGCGCTTTGCG TTTGTCCTCCATTCA prmA 2105039 - 2105932 + | ribosomal protein L11 methyltransferase TERM 1776 2106052 - 2106010 - f 100 -20.8 -3.60948 | gap 1, opp_overlap 2106017, overlap 2106011 2106017 GAAGAGAGCCTGAAA CCGAAAAGGCCGCCCAGTC CATCAT GAC-GGGCGGCCTTTTCGA AACAAAGGCGATGCC TERM 1777 2106051 - 2106011 - f 100 -22.1 -2.76087 | gap 1, opp_overlap 2106017, overlap 2106010 2106017 AAGAGAGCCTGAAAC CGAAAAGGCCGCCCAGTC CATCAT GAC-GGGCGGCCTTTTCG AAACAAAGGCGATGC TERM 1778 2106045 - 2106017 - f 95 -13.9 -4.35524 | gap 1, opp_overlap 2106017, overlap 2106011 2106010 GCCTGAAACCGAAAA GGCCGCCCAGTC CATCAT GAC-GGGCGGCC TTTTCGAAACAAAGG TERM 1779 2106017 - 2106045 + F 95 -13.9 -4.07568 | gap 1, opp_overlap 2106017 2106011 2106010 GCCTGAAACCGAAAA GGCCGCCCAGTC CATCAT GAC-GGGCGGCC TTTTCGAAACAAAGG TERM 1780 2106078 - 2106059 - f 100 -13.6 -4.41348 | opp_overlap 2106076, overlap 2106074 CCTTTTCGAAACAAA GGCGATGC CGAA GCATCGCC TGCTGGCCGGCTTGT TERM 1781 2106655 - 2106697 + G 73 -6.8 -4.25104 | overlap 2106656 2106658 CTGACCGGGTTTACG GGCTCGGCGGGCGTTGCG CTCGTCA CGCAGCGCCAGGCGATCG TTTTCGTCGACGGCC TERM 1782 2107147 - 2107183 + G 88 -7.9 -4.82901 | gap 1 ACCCCGCACCCTTTG GC-CCGCGCCATCGTC CATTCT GACGGACGCGCGGAGC TTTTTCTCGACAAGC Smed_2055 2106475 - 2108310 + | peptidase M24 Smed_2056 2108832 - 2108593 - | putative signal peptide protein Smed_2057 2109255 - 2108947 - | branched-chain amino acid transport Smed_2058 2109975 - 2109259 - | AzlC family protein TERM 1783 2110186 - 2110157 - R 88 -14.3 -3.54029 | gap 1, overlap 2110158 CTTGATCAACCATAA GGACGCGGGCGCAA GGA TCGCGCCCGC-CCC TACACGTCAACGCTT TERM 1784 2110186 - 2110158 - R 80 -14.5 -2.72096 | overlap 2110157 TTGATCAACCATAAG GACGCGGGCGCAA GGA TCGCGCCCGCCCC TACACGTCAACGCTT panB 2111014 - 2110193 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase panC 2111892 - 2111017 - | pantoate--beta-alanine ligase TERM 1785 2112191 - 2112171 - H 90 -8.3 -4.88228 | overlap 2112164 2112173 ATTGAACAGGAAAAA TTCCGACAA GGA TTGTCGGCA TAACGCCCAGGCTTT Smed_2061 2112254 - 2112658 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1786 2112757 - 2112715 - f 79 -13.4 -3.04792 | overlap 2112740 CGATTATCCCCAATA TCGGTTTGACGTCGGCCCTT GAG AAGGGCCGACACCTACCCCA CCAACGGACCGCGCC Smed_2062 2112943 - 2113854 + | binding-protein-dependent transport systems inner membrane component Smed_2063 2113851 - 2114732 + | binding-protein-dependent transport systems inner membrane component Smed_2064 2114764 - 2116113 + | extracellular solute-binding protein Smed_2065 2116263 - 2117891 + | sulfatase TERM 1787 2118388 - 2118423 + G 75 -3.9 -4.68908 | gap 2, overlap 2118389 CAGCGCCAGCGGGTC G-CCATGGGC-CGGGCG ATCG TGCGCGCGCCCAAGGTC TTTCTTTTCGATGAG Smed_2066 2117962 - 2119011 + | ABC transporter related Smed_2067 2118992 - 2119393 + | RpiR family transcriptional regulator Smed_2068 2120987 - 2119512 - | sulfatase TERM 1788 2121199 - 2121168 - g 72 -3.7 -4.56597 | gap 1 GCGGCGGCTGAAAAA CTCGGCATCAGTCA GCCCG CG-CTGACGCGGAG CATTCGCCGCCTGGA TERM 1789 2121216 - 2121234 + G 73 -3.1 -4.72986 | opp_overlap 2121218, overlap 2121218 ATTCGCCGCCTGGAA GACGAAA CGGGC TTTCGCC TTTTTGATCGGCATA Smed_2069 2121042 - 2122022 + | LysR family transcriptional regulator ligA 2124229 - 2122076 - | NAD-dependent DNA ligase LigA TERM 1790 2124192 - 2124211 + g 78 -2.8 -4.99947 | overlap 2124193 TCGGCGGCTTCGGCT TCGGTC ATTTGCTC GACCGG TTTTCTTTGATTCAG TERM 1791 2124234 - 2124257 + r 93 -13.2 -4.29396 | TGATTCAGCATGGAC GCGACTCCAG AACT TTGGAGTCGC TTTTACTGCATGATT Smed_2071 2126068 - 2124395 - | DNA repair protein RecN TERM 1792 2124516 - 2124532 + g 72 -4.3 -4.56597 | overlap 2124510 ATGCGAGCGACGCGA GTCGCGA TCA TCTCGGC TTTTTCCGCCGAGGG TERM 1793 2124797 - 2124815 + g 72 -11.7 -3.32993 | CACCTTCATGATCGG TCCCGGC CTGGT GCCGGGA TTGGTCTGTACGTGG TERM 1794 2126084 - 2126119 + r 75 -5.4 -4.56597 | gap 1, opp_overlap 2126105 2126107, overlap 2126086 CCGGTTTCATATCTT CGTTGTCGGGCGCCTGG AAA TCACGCGCC-GATAAGG TTTTTGCCCGCGCGC Smed_2072 2126970 - 2126104 - | hypothetical protein TERM 1795 2127211 - 2127192 - R 88 -10.6 -4.47217 | overlap 2127180 2127193 AATCAGCAATGAAAA TGCCGGCC TTTC GGCCGGCG ACTGGAGAATGAATA TERM 1796 2127210 - 2127193 - R 86 -14.1 -3.27246 | overlap 2127180 2127192 ATCAGCAATGAAAAT GCCGGCC TTTC GGCCGGC GACTGGAGAATGAAT lpxC 2128202 - 2127249 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 1797 2128092 - 2128079 - G 76 -8.1 -4.17048 | CCCGCTGGAAAACAA TGCCG GCAT CGGCA TCAGCCGGGTGGAAG TERM 1798 2128502 - 2128481 - R 100 -17.3 -4.85433 | AGAGAAATCGAAAAA TGCCCGGGC TTGC GCCCGGGCA TCGGCAAGGTGAAGG TERM 1799 2128576 - 2128520 - R 76 -12.4 -3.37612 | gap 1 GGCAAGGTGAAGGAA CAGCCTCCGCAT-CTTGCCTCGAACCG AAAT CGGCTCAAGAAAAACATGCAGTGGCTG AAGTACTACAGCGAC Smed_2074 2130400 - 2128628 - | cell division protein FtsZ Smed_2075 2131823 - 2130495 - | cell division protein FtsA TERM 1800 2130561 - 2130581 + g 70 -13.3 -2.88544 | opp_overlap 2130563, overlap 2130563 GCCGAGCGTGGAGAG CATGCCGCT GCC GGCGGCATG TGTCTCCAGATCGGC Smed_2076 2132749 - 2131820 - | cell division protein FtsQ ddl 2133663 - 2132737 - | D-alanine--D-alanine ligase TERM 1801 2133942 - 2133907 - R 100 -19 -3.56366 | opp_overlap 2133904, overlap 2133910 AATAATCTCTGGAAA GGACGAGCCCGCCTGC GGGC GCAGGCGGGCTCGTGG AGGTCTTGGCCGGGT TERM 1802 2133939 - 2133910 - R 100 -25.1 -2.90992 | opp_overlap 2133904, overlap 2133907 AATCTCTGGAAAGGA CGAGCCCGCCTGC GGGC GCAGGCGGGCTCG TGGAGGTCTTGGCCG Smed_2078 2134663 - 2133977 - | aquaporin Z TERM 1803 2134256 - 2134241 - G 83 -6.8 -4.89233 | overlap 2134242 GATGAACAGGAAAAA GGCGGT CATG ACCACC TCGGTGACGAGCGCT TERM 1804 2134696 - 2134680 - H 75 -8.7 -4.09511 | AATACTCCCCCAAAA CGAAGCA AAA CGCTTCG TTAACGAGAGTTCTA TERM 1805 2135944 - 2135955 + G 90 -2.2 -5.42259 | TCCTGCTTGTACAGA TGAC CGGC GTCG TTTTTTTCGGCCTGA Smed_2079 2135064 - 2136374 + | major facilitator superfamily metabolite/H(+) symporter TERM 1806 2136425 - 2136394 - T 80 -9.2 -4.21768 | opp_overlap 2136394 2136395 2136396 2136421, overlap 2136386 2136396 GAATGAACCTGAAAA CAGGGCCGCGGCGG ATGT CCGTCGCGGGCCCC TCTTTGGCGCTGATT TERM 1807 2136395 - 2136425 + T 79 -12.5 -3.37259 | gap 1, opp_overlap 2136386 2136394 2136396, overlap 2136394 2136396 2136421 AATGAACCTGAAAAC AGGG-CCGCGGCGG ATGT CCGTCGCGGGCCCC TCTTTGGCGCTGATT TERM 1808 2136423 - 2136396 - T 88 -14 -3.70019 | opp_overlap 2136396 2136395 2136394 2136421, overlap 2136386 2136394 ATGAACCTGAAAACA GGGCCGCGGCGG ATGT CCGTCGCGGGCC CCTCTTTGGCGCTGA TERM 1809 2136396 - 2136424 + T 84 -16 -2.61873 | gap 1, opp_overlap 2136386 2136394 2136396, overlap 2136395 2136394 2136421 ATGAACCTGAAAACA GGG-CCGCGGCGG ATGT CCGTCGCGGGCCC CTCTTTGGCGCTGAT murB 2137419 - 2136445 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 2138831 - 2137416 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1810 2137936 - 2137971 + g 77 -14 -3.28712 | gap 1 TTGATGCCGAGCCGC TGCG-CGACCGCCACGG CGG CCGTGGCGTTCGACACA TTGTGACGGCCGGGC TERM 1811 2138208 - 2138196 - G 74 -9.1 -3.88062 | opp_overlap 2138194 ACACAGCACACCAAA GCCGT AAA ACGGC ACATTTTCGACGAAC murG 2139952 - 2138828 - | N-acetylglucosaminyl transferase Smed_2083 2141124 - 2139970 - | cell division protein FtsW TERM 1812 2140940 - 2140911 - G 71 -5.7 -4.27211 | gap 1 GCGAAAGAAAGGAAA TGCCGACCATCACC ACC AGTGACGG-CGGAA GAAAGAGTGCGTGAC murD 2142572 - 2141181 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 2143678 - 2142578 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Smed_2086 2145342 - 2143909 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase murE 2146804 - 2145344 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Smed_2088 2148722 - 2146974 - | peptidoglycan glycosyltransferase Smed_2089 2149120 - 2148722 - | hypothetical protein mraW 2150215 - 2149127 - | S-adenosyl-methyltransferase MraW TERM 1813 2150242 - 2150252 + r 74 -6.8 -4.26076 | opp_overlap 2150242, overlap 2150224 ATTCCGGACAGAAAA CTGC TGC GCAG TTTTCCTGGAAATGC TERM 1814 2150252 - 2150242 - R 76 -6.8 -4.52857 | opp_overlap 2150242 2150224 ATTCCGGACAGAAAA CTGC TGC GCAG TTTTCCTGGAAATGC Smed_2091 2150709 - 2150269 - | cell division protein MraZ TERM 1815 2150798 - 2150786 - R 76 -3.3 -5.02074 | opp_overlap 2150788, overlap 2150788 TGACCGCGCAAAAAA TCCCC GCC GGGCA CATGCATGCCCGCCT Smed_2092 2152929 - 2151601 - | D-serine dehydratase Smed_2093 2154230 - 2152980 - | D-amino acid dehydrogenase small subunit purU 2155186 - 2154290 - | formyltetrahydrofolate deformylase Smed_2095 2156101 - 2155208 - | methenyltetrahydrofolate cyclohydrolase Smed_2096 2157502 - 2156225 - | glycine hydroxymethyltransferase TERM 1816 2157440 - 2157457 + g 73 -12.7 -3.14132 | ATTGTCGATGGCCTG CGCGACC AATG GGTCGCG TTCGTGAACCGGCGC TERM 1817 2158538 - 2158517 - g 76 -12.9 -3.4052 | GCGGAAGTGAACGAA CGCGTCGGC TCCC GCCGCCGCG TGCCTGCCGGAGAAA Smed_2097 2157638 - 2158558 + | LysR family transcriptional regulator TERM 1818 2159105 - 2159095 - g 71 -4.6 -4.4715 | opp_overlap 2159102 CCGTAACGGACAAAA GCCG CTT CGAC GCCGTCCTGACGAAC Smed_2098 2158833 - 2159864 + | extracellular solute-binding protein TERM 1819 2159882 - 2159906 + F 95 -18.6 -2.63631 | CTCTCTACTGACCGA GCCGAGGCGG ACGAC CCGCCTCGGC TCCTATCCCGGTTCC TERM 1820 2160972 - 2160956 - g 72 -2.1 -4.72986 | overlap 2160959 CAGCCTCACGAAAAA CACGGCC CTC GGCATTG CGGTCGGATATCCCG Smed_2099 2159934 - 2161142 + | binding-protein-dependent transport systems inner membrane component Smed_2100 2161142 - 2162272 + | polar amino acid ABC transporter, inner membrane subunit Smed_2101 2162302 - 2163060 + | ABC transporter related Smed_2102 2164375 - 2163188 - | FAD dependent oxidoreductase TERM 1821 2163517 - 2163539 + g 81 -9.9 -4.11235 | gap 1, opp_overlap 2163514 CGCTGGCAAGAATCC GATCGGTCGG ATCG CCG-CCGATC TTTATATAATGCTTG TERM 1822 2164085 - 2164061 - G 76 -11.3 -3.74077 | TTCCAGATAGTCAAA TGCGCTGCCCG GAG CGGGCGCCGCA ATCAGGCAACCGACC Smed_2103 2165049 - 2164510 - | lytic transglycosylase catalytic Smed_2104 2166040 - 2165276 - | N-acetylmuramoyl-L-alanine amidase TERM 1823 2165375 - 2165400 + g 71 -6.1 -4.37658 | gap 1, opp_overlap 2165371 2165370 2165381 TTGCCGGAAATGGCG CTGAA-ACGCCG CGA CGGCGCCTTCGG TTTTCTGGCAGAATT TERM 1824 2165393 - 2165381 - G 70 -10.5 -3.54935 | opp_overlap 2165375, overlap 2165371 2165370 GAAATGGCGCTGAAA CGCCG CGA CGGCG CCTTCGGTTTTCTGG TERM 1825 2166003 - 2165955 - G 70 -12.5 -2.84687 | gap 3, opp_overlap 2165971 TGAAGTATGATCATA TCGGGCCTGCGCCC-ACC--GGCG CGCT CGCCGTGGTTGGGCGAAGGCACGA GACGGGCGCCGGGGA Smed_2105 2166744 - 2166037 - | heat shock protein DnaJ domain-containing protein TERM 1826 2166638 - 2166625 - G 84 -8.1 -4.53303 | opp_overlap 2166626, overlap 2166627 CATTGCGACAGAAAA GGCGA CCTT TCGCC GCGTTTCCGGATCTC Smed_2106 2167101 - 2168315 + | pyrophosphate--fructose-6-phosphate 1-phosphotransferase TERM 1827 2168326 - 2168357 + F 79 -13.8 -3.14564 | opp_overlap 2168321 2168320, overlap 2168323 ACTGACGAATGCCGA ACGGTTCGCTGTTT TCTG AAACGGCGAACCGC TTCCTGCCCGAATAC TERM 1828 2168681 - 2168697 + G 71 -10.9 -3.51924 | CACCGTATTGAAGTG GATAGGC GCT GCCTATC TTGTCTGGCTCGGAA Smed_2107 2168451 - 2169083 + | lysine exporter protein LysE/YggA TERM 1829 2169102 - 2169118 + F 74 -13.7 -2.56715 | overlap 2169099 CTGCGCTCGCCTGCT TGCCGCC ACC GGCGGCA TAGGTTAATGGAAAT TERM 1830 2170032 - 2170042 + G 76 -8.2 -4.18018 | TGGCTATGAAGGGTC GGCC GAG GGCC TTTTCGATGCGGAAA Smed_2108 2169202 - 2170203 + | lytic transglycosylase catalytic Smed_2109 2171606 - 2170245 - | beta-lactamase Smed_2110 2171811 - 2173073 + | hypothetical protein TERM 1831 2173690 - 2173649 - g 78 -3 -5.03314 | gap 2, overlap 2173651 GTGATGCGCAAAAAA GCCCAGACGAACGGATCCTC GCTC GAGG-TCAGATCGT-TCGGC AGGGGCTATGCCTGG Smed_2111 2173070 - 2173744 + | methyltransferase type 11 TERM 1832 2173873 - 2173859 - f 74 -7.8 -4.11394 | ATGTTATGGTGAAAA GGAGGC CAC ACCTCC CTGGGGAACTCACCA Smed_2112 2173945 - 2174730 + | glycoside hydrolase family protein Smed_2113 2174863 - 2176080 + | lytic murein transglycosylase TERM 1833 2176220 - 2176197 - f 91 -16.8 -3.50393 | opp_overlap 2176189 2176187 2176200, overlap 2176200 TTGCAGGCGACACAA GAAGCGGGTG GCGA CACCCGCTTC GCTGGCGTATTGCTT TERM 1834 2176200 - 2176217 + F 76 -12.7 -3.0792 | opp_overlap 2176197 2176200, overlap 2176189 2176187 CAGGCGACACAAGAA GCGGGTG GCGA CACCCGC TTCGCTGGCGTATTG TERM 1835 2176217 - 2176200 - f 87 -12.7 -3.88946 | opp_overlap 2176200 2176189 2176187, overlap 2176197 CAGGCGACACAAGAA GCGGGTG GCGA CACCCGC TTCGCTGGCGTATTG Smed_2114 2176299 - 2177243 + | hypothetical protein TERM 1836 2177740 - 2177701 - T 100 -22.4 -3.63073 | opp_overlap 2177707, overlap 2177703 2177707 GACAGGCTGTAACAA CAGAAAGCCCATGAACGC CGCT GCGTTCATGGGCTTTCTC CATGGTCATCGTAGT TERM 1837 2177738 - 2177703 - T 100 -25 -3.39288 | opp_overlap 2177707, overlap 2177701 2177707 CAGGCTGTAACAACA GAAAGCCCATGAACGC CGCT GCGTTCATGGGCTTTC TCCATGGTCATCGTA TERM 1838 2177734 - 2177707 - T 100 -20 -4.34263 | opp_overlap 2177707, overlap 2177703 2177701 CTGTAACAACAGAAA GCCCATGAACGC CGCT GCGTTCATGGGC TTTCTCCATGGTCAT TERM 1839 2177707 - 2177734 + T 100 -20 -3.93963 | opp_overlap 2177707 2177703 2177701 CTGTAACAACAGAAA GCCCATGAACGC CGCT GCGTTCATGGGC TTTCTCCATGGTCAT Smed_2115 2178714 - 2177773 - | 5,10-methylenetetrahydrofolate reductase Smed_2116 2179739 - 2178717 - | methyltransferase type 11 TERM 1840 2178823 - 2178844 + g 74 -5.1 -4.61482 | gap 1 AGTTTCCCCTCCTGC CCG-CCTTCC GGC GCAAGGTCGG TTGTTTTTTCGAGCG Smed_2117 2181868 - 2180219 - | putative ABC transporter ATP-binding protein Smed_2118 2182763 - 2181993 - | putative ribonuclease protein TERM 1841 2182571 - 2182534 - G 81 -9.9 -4.22927 | gap 1, opp_overlap 2182533 2182548, overlap 2182530 CCATGAAGAGAGAAA TGCGTCGCATCGAACCGC CTC GCTGTCTGAT-CGACGCA CTCCTTGCGATCCGG Smed_2119 2182964 - 2183908 + | hypothetical protein TERM 1842 2184218 - 2184235 + G 78 -4.9 -4.71426 | gap 1, overlap 2184213 TGAAGGTCATGGAAG TGGCCGAT GCG ATCG-CCA TTTTCTTCGTGGAAC TERM 1843 2184400 - 2184420 + G 84 -2.3 -5.32882 | overlap 2184402 GCGCTTTTACCGATC GTCGCTGCC TTC GGCCTCGCC TTTTTTCTGCTCGTG TERM 1844 2184840 - 2184824 - g 89 -11.5 -4.38712 | GGCAGGTTCACAAAA CGGCGAG TAT CCCGCCG GTATCGCCGGCGATC Smed_2120 2183905 - 2184858 + | hypothetical protein Smed_2121 2184895 - 2186541 + | acetolactate synthase 2 catalytic subunit Smed_2122 2186879 - 2187811 + | transposase IS116/IS110/IS902 family protein Smed_2123 2188322 - 2187984 - | hypothetical protein Smed_2124 2189323 - 2188394 - | hypothetical protein TERM 1845 2189018 - 2188997 - G 70 -13 -2.8655 | TCCATGCAGAGGATA GGAGGCGC CGGGGC GCGCCTCC ACGGGCTCGGGATGA TERM 1846 2190399 - 2190447 + G 72 -11.7 -3.28791 | gap 1, opp_overlap 2190398 2190397 TCGTCGCGGATAAGG GCCGCAAGCAGGTG-CTCGCCT ATGACG AGGCGGGACAGCTGCTCGCCGC TTATCCGGCCACCAT Smed_2125 2189393 - 2190784 + | ErfK/YbiS/YcfS/YnhG family protein Smed_2126 2190938 - 2192227 + | FAD dependent oxidoreductase TERM 1847 2192247 - 2192219 - T 75 -9.5 -3.92373 | opp_overlap 2192218, overlap 2192236 CATTTCATCGATAAA CGGTTCTGAACGG AAA CCGTCCGCAACCG ATCGTTACGCCGCCC Smed_2127 2192968 - 2192252 - | cobyrinic acid ac-diamide synthase TERM 1848 2193091 - 2193062 - R 72 -8.7 -3.91352 | gap 1, overlap 2193068 ACATGGTTAACGAAA CGG-AAACTTTTGG CCC CCAAAAGTTAACCG GAGGGCGCATTTTCG TERM 1849 2193084 - 2193068 - R 75 -9.5 -3.89336 | overlap 2193062 TTAACGAAACGGAAA CTTTTGG CCC CCAAAAG TTAACCGGAGGGCGC TERM 1850 2193151 - 2193126 - R 100 -17.7 -4.92777 | AAGACTAACGAAAAA GCCCGGAAAAC ATGC GTTTTCCGGGC TCGAAAAAATTAACG Smed_2128 2194322 - 2193177 - | iron-containing alcohol dehydrogenase Smed_2129 2195704 - 2194319 - | aldehyde dehydrogenase TERM 1851 2195758 - 2195736 - R 73 -11.3 -3.45118 | TCATTTCACAATGAA TCCCTCCCC CCTGT GAGGAGGGA TTGCGGAGAGATAAA Smed_2130 2197149 - 2195785 - | glutamine synthetase catalytic region TERM 1852 2197201 - 2197226 + r 74 -13.3 -2.68487 | overlap 2197198 2197203 TCGTACCGCGAAGCG GAGTGGGACCG CGCG CGATCCCACTC TCCTCTACTGCTTAC Smed_2131 2198785 - 2197238 - | amino acid permease-associated region TERM 1853 2198737 - 2198756 + g 86 -13.6 -3.86995 | opp_overlap 2198736 CGTAGCCCATTGAAT GCAGGACC TGCA GGTCCTGC TTCTTGTCGATTTCC Smed_2132 2199665 - 2198892 - | N-formylglutamate amidohydrolase TERM 1854 2198944 - 2198965 + g 83 -9.5 -4.37886 | gap 1, opp_overlap 2198944 AGCCCCACCAGACAA TCGGCCATGA CCC TC-TGGCCGA TTTTATCGCGGATGA TERM 1855 2200712 - 2200702 - g 73 -6.8 -4.27617 | opp_overlap 2200701 GAGACCGGATGAAAA CCCT CGA AGGG CTGTTCGATTCCACA Smed_2133 2199873 - 2200751 + | RpiR family transcriptional regulator Smed_2134 2200942 - 2202036 + | extracellular solute-binding protein TERM 1856 2202044 - 2202080 + F 91 -17.4 -3.14132 | gap 1, overlap 2202048 TACAGTAGTCGCTAC GA-GGCCTCCCCGCCCA TGAA TGGGTGGGGAGGTCATC TTCCTCCGACGCCGG TERM 1857 2202048 - 2202075 + F 100 -19.2 -2.77523 | overlap 2202044 GTAGTCGCTACGAGG CCTCCCCGCCCA TGAA TGGGTGGGGAGG TCATCTTCCTCCGAC Smed_2135 2202112 - 2202993 + | binding-protein-dependent transport systems inner membrane component Smed_2136 2202990 - 2203778 + | binding-protein-dependent transport systems inner membrane component TERM 1858 2204277 - 2204290 + G 73 -8.1 -4.03234 | GCTTTCCGCACTTGA CGCGA AGAT TCGCG TTTCTCTGCGCGAGG Smed_2137 2203783 - 2204844 + | ABC transporter related Smed_2138 2205159 - 2205686 + | riboflavin synthase subunit beta TERM 1859 2205731 - 2205693 - f 100 -20.4 -3.65199 | overlap 2205694 AACGCCTGACGGAAA CTGCCCCTCTCCTCGGAT TTA ACCCGAGGAGAGGGCCAA CTCGAGGTCGCTGAA TERM 1860 2205730 - 2205694 - f 100 -21.7 -2.78798 | overlap 2205693 ACGCCTGACGGAAAC TGCCCCTCTCCTCGGAT TTA ACCCGAGGAGAGGGCCA ACTCGAGGTCGCTGA Smed_2139 2205851 - 2206735 + | helix-turn-helix domain-containing protein Smed_2140 2206897 - 2209119 + | TonB-dependent siderophore receptor Smed_2141 2209241 - 2210374 + | peptidase M24 Smed_2142 2211497 - 2210400 - | ABC transporter related Smed_2143 2213453 - 2211507 - | hypothetical protein Smed_2144 2214347 - 2213481 - | binding-protein-dependent transport systems inner membrane component Smed_2145 2215432 - 2214344 - | binding-protein-dependent transport systems inner membrane component TERM 1861 2215358 - 2215389 + gr 73 -11.5 -3.3482 | gap 1 TGTTGCTGGGCGCGG GGCGCGGGGCGCGC CGGAA GCGCGCCCT-CGAC TTGATTCAGGGGTTG Smed_2146 2216639 - 2215395 - | extracellular solute-binding protein TERM 1862 2215703 - 2215689 - GH 71 -10 -3.58726 | GGGCTGCATATAGAA CTCGAC GAA GTCGAG CAGGACCTTCTTCTT TERM 1863 2215780 - 2215750 - GH 72 -9.6 -3.6393 | overlap 2215748 TTCATCAGAGAAAGA GTGTCGCCACCAGC GAA ACTGGAGACGCCAC CGCTCGGGCCTGGGA Smed_2147 2216810 - 2217832 + | periplasmic binding protein/LacI transcriptional regulator Smed_2148 2217863 - 2218510 + | hypothetical protein TERM 1864 2218561 - 2218541 - T 78 -14.7 -2.62616 | GGACTTTCCACAGGA GTGCGCCCA TGC CGGGCGCAC CACAACGAAAACACC TERM 1865 2218594 - 2218573 - T 100 -13.7 -4.51174 | GCACCACAACGAAAA CACCCGGCA TTGC TGCCGGGCG TCTCGCTGCGCGCAT Smed_2149 2219084 - 2218647 - | ribose-5-phosphate isomerase B tpiA 2219892 - 2219125 - | triosephosphate isomerase Smed_2151 2220674 - 2219889 - | DeoR family transcriptional regulator Smed_2152 2221708 - 2220779 - | xylose isomerase domain-containing protein Smed_2153 2222567 - 2221722 - | HAD family hydrolase Smed_2154 2223847 - 2222564 - | carbohydrate kinase FGGY TERM 1866 2222920 - 2222961 + g 70 -10.1 -3.57144 | gap 1, overlap 2222921 CGAGCCCCGTGTCCG TC-GCCGGATCGATGCTCTC CGA GAGGGCGGCGATCCGCCCGG TTTCGAAATGCGCAG Smed_2155 2224899 - 2223844 - | class II aldolase/adducin family protein Smed_2156 2226466 - 2224913 - | glycerol-3-phosphate dehydrogenase TERM 1867 2225909 - 2225935 + g 83 -6.5 -4.87389 | gap 1 GCGAACGCTGGTGCA GGCGGTACGGGT CAGG ACCCGCG-CGCC TTTGTTTTTCGCGTC Smed_2157 2227139 - 2226471 - | class II aldolase/adducin family protein Smed_2158 2228186 - 2227149 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Smed_2159 2229760 - 2228183 - | carbohydrate kinase FGGY TERM 1868 2229565 - 2229588 + g 100 -14.6 -4.13014 | overlap 2229566 CAGGGAGGTTCTCGA TCCTGGCCGA GAGC TCGGCCAGGG TTTTGACGGTGTCCG TERM 1869 2229566 - 2229587 + g 81 -15.9 -3.07487 | overlap 2229565 AGGGAGGTTCTCGAT CCTGGCCGA GAGC TCGGCCAGG GTTTTGACGGTGTCC Smed_2160 2230884 - 2229760 - | ABC transporter related TERM 1870 2230170 - 2230148 - G 78 -14.2 -3.06696 | CTTGCCTCGAAGACA TTCATCGGCG GCT CGCCGACGAA GGTTCCGGTAAAGAG TERM 1871 2230718 - 2230704 - G 71 -11.4 -3.53012 | opp_overlap 2230708 TCGTGCCCCTGGAAA CCGGCT CGA AGCCGG CAATCATTCGCAGCG Smed_2161 2231999 - 2230881 - | ABC transporter related TERM 1872 2230970 - 2230959 - G 72 -7.2 -4.1891 | CTTGTCGAACAGAAA GGCC GTCC GGCC GTCGACTGCGATATG TERM 1873 2231009 - 2230987 - G 74 -14.8 -2.62983 | TCGACTGCGATATGA GCCGGTCCGG CGA CCGGACCGGG CGTGCCGGCAGGACG Smed_2162 2232861 - 2232004 - | binding-protein-dependent transport systems inner membrane component Smed_2163 2233796 - 2232873 - | binding-protein-dependent transport systems inner membrane component TERM 1874 2233731 - 2233741 + g 73 -6.8 -4.32034 | opp_overlap 2233731 CAGGGAGAGCACATA GGGT AAA ACCC TTTTGCTGATCCTGA TERM 1875 2233834 - 2233867 + r 88 -10.2 -4.46617 | gap 1, opp_overlap 2233835, overlap 2233835 GTGTCTATGACAATA AGGGGTC-GGCCGCG GCCGG CGCAGCCAGACCCCC TTTTCCGTTTGTTTT TERM 1876 2233835 - 2233866 + r 82 -13.7 -3.2553 | gap 1, opp_overlap 2233835, overlap 2233834 TGTCTATGACAATAA GGGGTC-GGCCGCG GCCGG CGCAGCCAGACCCC CTTTTCCGTTTGTTT TERM 1877 2233866 - 2233835 - R 100 -15.9 -3.84406 | gap 1, opp_overlap 2233835 2233834 TGTCTATGACAATAA GGGGTC-GGCCGCG GCCGG CGCAGCCAGACCCC CTTTTCCGTTTGTTT TERM 1878 2233906 - 2233894 - R 71 -10.5 -3.53012 | overlap 2233895 TTTTTCGTGCCGAAA CGGCG GCC CGCCG GTGACGGGCTGGCCT Smed_2164 2235424 - 2233979 - | extracellular solute-binding protein TERM 1879 2234497 - 2234555 + g 74 -13.9 -2.85996 | gap 2, opp_overlap 2234485 TCATGGCGGAAGCGC CGGCGCCGAGGTCGGTGCCGACCTGATAC CAG GTAT-AGGTCGAC-CAGTCCTTGGGGCCG CTTTCCTGGATCATC TERM 1880 2235148 - 2235128 - G 72 -11.9 -3.34715 | opp_overlap 2235146, overlap 2235126 CACCTTGTCGAAATA GACGTCCTC CGG GAAGACGTC ATAGGTGACTTCGAT Smed_2165 2236576 - 2235539 - | DeoR family transcriptional regulator TERM 1881 2236650 - 2236623 - R 100 -12 -5.03314 | opp_overlap 2236641 CGCATGTCGAAAAAA CGCGGACGCATC GACG GATACGTTCGCG GAAGATCCCGGCAAG Smed_2166 2237419 - 2236676 - | response regulator receiver protein Smed_2167 2237663 - 2238742 + | spermidine/putrescine ABC transporter ATPase subunit Smed_2168 2238792 - 2239952 + | putative periplasmic binding ABC transporter protein Smed_2169 2240015 - 2240929 + | binding-protein-dependent transport systems inner membrane component TERM 1882 2241363 - 2241373 + G 77 -2.4 -5.08824 | overlap 2241361 CGGATCGATCATCGC CGCC CAT GGCC TTTTTTCGATGGCGC Smed_2170 2240929 - 2241747 + | binding-protein-dependent transport systems inner membrane component Smed_2171 2241752 - 2242513 + | short-chain dehydrogenase/reductase SDR Smed_2172 2243616 - 2242627 - | helix-turn-helix domain-containing protein TERM 1883 2243828 - 2243807 - g 73 -10.9 -3.57144 | gap 1, overlap 2243809 CCGGTCACGCCGAAA CAGATCGCCG AAT CGGCGATC-G ACGCCGCCAGAGCGG TERM 1884 2243827 - 2243809 - g 82 -14.6 -3.36515 | overlap 2243807 GGTCACGCCGAAACA GATCGCCG AAT CGGCGATC GACGCCGCCAGAGCG Smed_2173 2243708 - 2244610 + | hypothetical protein TERM 1885 2246192 - 2246173 - g 73 -10.7 -3.60296 | CATGTCGACGCCAAA GCCGGCA AGTCCG TGCCGGC GCCGGCCGAGGTGAT Smed_2174 2244802 - 2246292 + | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase TERM 1886 2246503 - 2246466 - g 79 -13.5 -3.47573 | gap 1 TTATCCACACGAGAA CGAGGTCGAGC-GCAC CGGCGTC GTGCCGCGCGACCTCG GGCAGGAAATTGCCC TERM 1887 2246625 - 2246644 + G 76 -5.8 -4.63218 | gap 1 GCGCGAGCTCGGCCG CGGATCAAT GGG ATTGA-CCG TTTTCTTCGGCCGCC Smed_2175 2246380 - 2247540 + | acyl-CoA dehydrogenase domain-containing protein TERM 1888 2249525 - 2249511 - g 73 -8.6 -4.07568 | TTGCGGGCCTCAAAA TCAGCA AGG TGCTGA ACGGCTATCGCGGCA Smed_2176 2247644 - 2249707 + | CoA-binding domain-containing protein Smed_2177 2249712 - 2250494 + | carnitinyl-CoA dehydratase Smed_2178 2250833 - 2252422 + | extracellular solute-binding protein TERM 1889 2252990 - 2253015 + G 75 -4.5 -4.74132 | opp_overlap 2252983, overlap 2252989 2252992 2253009 TCATCAATGTGATAT CGCTCGCGGCG ATTT CGCTGCCGGAG TTTTTCATCGGCTAT Smed_2179 2252422 - 2253531 + | binding-protein-dependent transport systems inner membrane component Smed_2180 2253528 - 2254355 + | binding-protein-dependent transport systems inner membrane component TERM 1890 2254847 - 2254867 + G 81 -12.6 -3.72576 | overlap 2254855 GCGGCCAATTGCAGC GCGCCATG ACCGC CATGGCGC TTTGCTCCAAGCCGG Smed_2181 2254348 - 2255979 + | ABC transporter related TERM 1891 2256014 - 2255980 - T 85 -17.1 -2.52543 | AGTGCCGGCAATTGA GTGCGAGTGGCGGCC GCCAT GGCCGCCACTCGGCC TGCCGAGATCACGAT TERM 1892 2256087 - 2256108 + T 80 -4.4 -4.91109 | gap 2, overlap 2256086 2256087 TCCAAAGAGCGGAAT GCG-G-GCGG AAAA CCGCGCACGC TTTTTCTCATCCCGC Smed_2182 2256919 - 2256125 - | putative transcriptional regulator TERM 1893 2256753 - 2256732 - G 100 -10.1 -5.14563 | overlap 2256735 2256745 GGCGGCAGCAAAAAA TCATCGGCC GAAA GGCCGAAGA AGGCCGCGATCCGCG TERM 1894 2256990 - 2257012 + H 78 -11.3 -3.72576 | opp_overlap 2256988 CAAGTCGCGAAATTG TCTGGCGCC CGGCA GGCGCTAGA TTTCCTCCCAACAAA Smed_2183 2257047 - 2258636 + | extracellular solute-binding protein Smed_2184 2258719 - 2260716 + | peptidase S15 Smed_2185 2261706 - 2260768 - | alpha/beta hydrolase domain-containing protein TERM 1895 2261182 - 2261199 + g 83 -9.1 -4.27316 | opp_overlap 2261166 GACCTGCCCGGCGAT GCCGGAG AGCC CTTCGGC TTTTGCCTTCAGCAC Smed_2186 2261833 - 2262741 + | LysR family transcriptional regulator TERM 1896 2262838 - 2262827 - f 71 -7.2 -4.1552 | overlap 2262804 2262835 CATTCCGGGAACAAA GCCG CAAA CGGC GTTAAACCGGGGAGA Smed_2187 2262860 - 2264020 + | extracellular solute-binding protein TERM 1897 2264119 - 2264105 - f 76 -12.8 -3.07895 | opp_overlap 2264101 2264100 CGGATGCCCAACAGA CGGGGC GAG GCCCCG GCCGCTTGTCCATTC Smed_2188 2264202 - 2265197 + | ABC transporter related Smed_2189 2265194 - 2266144 + | binding-protein-dependent transport systems inner membrane component Smed_2190 2266134 - 2266949 + | binding-protein-dependent transport systems inner membrane component Smed_2191 2266976 - 2268403 + | gamma-aminobutyraldehyde dehydrogenase Smed_2192 2268614 - 2270788 + | TonB-dependent siderophore receptor TERM 1898 2270924 - 2270889 - g 85 -15.6 -3.50853 | gap 1, opp_overlap 2270882 2270922, overlap 2270892 CTGGTGCAACGAGAA GATGATGCTGTCGGAGA ACC TCTCCGACGGCATC-TC GCTGCCCGAGTTCTT TERM 1899 2270922 - 2270892 - g 86 -18.4 -2.59447 | opp_overlap 2270882, overlap 2270889 GTGCAACGAGAAGAT GATGCTGTCGGAGA ACC TCTCCGACGGCATC TCGCTGCCCGAGTTC Smed_2193 2270794 - 2271549 + | ferric iron reductase Smed_2194 2271552 - 2272685 + | periplasmic binding protein TERM 1900 2272849 - 2272889 + G 84 -8.2 -4.4715 | gap 1, overlap 2272852 GGCGATCGTGTATCT CGCGGCTCGATACGGCCGC TTCC GCAACTGGATCGAGCC-CG TTTTGTCGATTGCGG Smed_2195 2272802 - 2273323 + | hypothetical protein Smed_2196 2274967 - 2273420 - | trimethylamine methyltransferase Smed_2197 2277556 - 2275109 - | FAD dependent oxidoreductase TERM 1901 2275540 - 2275515 - G 70 -10.4 -3.55563 | ATGTCATGGCCGAAA TGCCGGAACG CTTTCT CGATCCGGCA ACTGTCCAGCGTGTG TERM 1902 2276357 - 2276378 + g 82 -5.8 -4.82901 | overlap 2276358 AAGCGTCTCGCCCAC GCGCTCCT TCAGGT AGGAGCGG TTTTTCTGAAAAGGC Smed_2198 2280000 - 2277553 - | FAD dependent oxidoreductase TERM 1903 2280054 - 2280066 + H 85 -10.5 -4.258 | opp_overlap 2280053 2280052 TGAAGTCCATCAAGC GCCGC GAG GCGGC TTTATTAATCGATGA Smed_2199 2280123 - 2280968 + | LysR family transcriptional regulator Smed_2200 2282685 - 2281006 - | hypothetical protein TERM 1904 2281480 - 2281447 - G 74 -13.1 -3.36968 | overlap 2281448 CACCGAACGCCACAA GGTGCTCTGGAACGG CGGC CCGCTCCAGAGCGCG CCCTGAAAGGGATCG TERM 1905 2281479 - 2281448 - G 80 -16.6 -2.6186 | overlap 2281447 ACCGAACGCCACAAG GTGCTCTGGAACGG CGGC CCGCTCCAGAGCGC GCCCTGAAAGGGATC TERM 1906 2282163 - 2282143 - G 76 -10.3 -3.87104 | CGCAGACCAGAACAA GGCGAGCGC CAC GAGCCCGCC GAGCGCGTTGGCAAC TERM 1907 2283069 - 2283105 + G 74 -13.6 -2.96873 | gap 1, overlap 2283067 TTCGATTTCGTGTCC GGCCGGCGCGAGCCGCC CGAA GGCGTCG-GTGCCGGCC TCGTTTACTCCCGCT Smed_2201 2282883 - 2284166 + | methionine gamma-lyase Smed_2202 2284583 - 2284287 - | helix-turn-helix domain-containing protein TERM 1908 2284374 - 2284348 - G 71 -9.3 -3.7821 | ATCACCAGAAGATAA GCGCGAGTCGG CCCTT CCGGCTGGCGC GAACCCTGTTCCCAA Smed_2204 2285394 - 2285035 - | glyoxalase/bleomycin resistance protein/dioxygenase Smed_2205 2285999 - 2285391 - | TetR family transcriptional regulator TERM 1909 2285523 - 2285507 - G 71 -5.7 -4.2558 | overlap 2285510 CACGGTGGAGCAAAA CGACCGC GAA GCTGCCG TCGAGGAGCAGCAGC Smed_2206 2286083 - 2286874 + | enoyl-CoA hydratase Smed_2207 2287367 - 2286888 - | hypothetical protein Smed_2208 2288730 - 2287417 - | hypothetical protein TERM 1910 2288212 - 2288197 - G 76 -6 -4.56597 | overlap 2288198 GCGGTGTTTCAAAAA TCGCCC CGGC GGGCGC CACCCCATCGTGACC TERM 1911 2289106 - 2289137 + G 74 -10.2 -3.76402 | gap 1 GCGCGCGTGCAGCGC TCCGGATATCTGCAG GCG CTGCGGC-ATCCGGA TTTCATCAATGCGGT Smed_2209 2288962 - 2289756 + | hypothetical protein Smed_2210 2290084 - 2289863 - | hypothetical protein Smed_2211 2291434 - 2290220 - | hypothetical protein TERM 1912 2290652 - 2290603 - G 74 -5 -4.56597 | gap 3, opp_overlap 2290605, overlap 2290637 CCCGGGCGGGAAAAA CATGTGCGCCGCAGCCGC-TCGTCA CTT CGACGAAGCGGCCACCGCCC-C-TG GTCGCGATATCGGGT TERM 1913 2290741 - 2290723 - G 72 -7.4 -4.11216 | TGGTGATTTCGAAAA GCCGGA GATCGAG TCCGGC GGCCCCAATGCGCTC Smed_2212 2291664 - 2291431 - | hypothetical protein Smed_2213 2293502 - 2291664 - | SARP family transcriptional regulator TERM 1914 2293165 - 2293131 - G 80 -14.3 -3.14132 | gap 1, opp_overlap 2293130 GGCGCCTGCTAGGAA CGTATCGCGCCAGAGC GAGA GCCC-GGCGCGAAACG CTTCCTCCGAGCTCC Smed_2214 2293869 - 2294660 + | aminoglycoside N(3')-acetyltransferase Smed_2215 2294976 - 2294701 - | XRE family transcriptional regulator TERM 1915 2295720 - 2295703 - g 78 -4.8 -4.77986 | gap 1, overlap 2295705 TCAAAGACGCAAAAA CG-GCGC GCGAG GCGCTCG ATGCCAACAACAAGG TERM 1916 2296073 - 2296098 + G 75 -14.7 -2.7728 | gap 1, overlap 2296075 AAGGGTTCTGGCAGA GGCGGCCG-GCG TCT CGCTCGGCCGTC TGATTGAAATTTCGG TERM 1917 2296075 - 2296096 + G 74 -13.7 -2.9296 | gap 1, overlap 2296073 GGGTTCTGGCAGAGG CGGCCG-GCG TCT CGCTCGGCCG TCTGATTGAAATTTC Smed_2216 2295456 - 2296250 + | hypothetical protein TERM 1918 2296405 - 2296368 - T 100 -16.3 -4.07568 | opp_overlap 2296372, overlap 2296372 CTTCCTTGCGCAAAA CTAAGGAGCCCCCACGC CGAG GCGTGAGGGCTCCTTTT CCGTCAGCCGGGGGA TERM 1919 2296401 - 2296372 - T 100 -21.5 -3.66908 | opp_overlap 2296372, overlap 2296368 CTTGCGCAAAACTAA GGAGCCCCCACGC CGAG GCGTGAGGGCTCC TTTTCCGTCAGCCGG TERM 1920 2296372 - 2296401 + T 100 -19.3 -4.18018 | opp_overlap 2296372 2296368 CTTGCGCAAAACTAA GGAGCCCCCACGC CGAG GCGTGAGGGCTCC TTTTCCGTCAGCCGG Smed_2217 2296796 - 2296443 - | putative signal peptide protein Smed_2218 2297339 - 2296935 - | hypothetical protein TERM 1921 2297415 - 2297405 - R 70 -2.4 -4.78848 | overlap 2297382 2297406 CGCCGAAAGAGAAAA CGGC AGC GGCG AACGGTTGCCTCGAT Smed_2219 2297855 - 2297433 - | hypothetical protein TERM 1922 2297761 - 2297744 - G 80 -4.7 -4.83615 | overlap 2297722 2297745 TATGGCGCACAAAAA CCGTGAG CAGT CCCTCGG CCACGCCGGTGGCGC Smed_2220 2298244 - 2297891 - | hypothetical protein TERM 1923 2298061 - 2298044 - G 73 -7 -4.28994 | GACGATCCATGAAAA GACGAC CGTCTC GTCGTC CGTCGCCTGAACCGC Smed_2221 2298927 - 2298358 - | putative transmembrane protein TERM 1924 2298931 - 2298918 - G 77 -4.5 -4.93296 | GGACGACGACAAAAA CGCAA CGCA TCGCG GAACCTCTCGTTTGC Smed_2222 2299445 - 2299152 - | GYD family protein TERM 1925 2299283 - 2299252 - G 76 -7.2 -4.27584 | gap 1, overlap 2299253 AGCGTCAAGGCAAAA CGCGCAGCGACCGCA TCG TCCGG-CGCTTCGCA GATCGCCACCAGGTC TERM 1926 2299697 - 2299665 - R 95 -14.2 -3.64599 | opp_overlap 2299672, overlap 2299672 CGAGTAGAGCGGAAA TGAAAAAGCCGGGC GCTAG GCCCGGCTTCGTCA TCATGAAACTTCCTG TERM 1927 2299690 - 2299672 - R 100 -13.1 -4.99134 | opp_overlap 2299672, overlap 2299665 AGCGGAAATGAAAAA GCCGGGC GCTAG GCCCGGC TTCGTCATCATGAAA TERM 1928 2299672 - 2299690 + r 79 -13.1 -3.23216 | opp_overlap 2299665 2299672 AGCGGAAATGAAAAA GCCGGGC GCTAG GCCCGGC TTCGTCATCATGAAA Smed_2223 2301770 - 2299716 - | RNA polymerase sigma factor RpoD TERM 1929 2301283 - 2301263 - G 71 -11.1 -3.51411 | overlap 2301259 2301264 ACGCCTGGAAAGTAA GCGGGCTCT CAC AGAGCCCGG CGATCATCGTTTCAC TERM 1930 2301282 - 2301264 - G 75 -14.6 -2.70525 | overlap 2301263 2301259 CGCCTGGAAAGTAAG CGGGCTCT CAC AGAGCCCG GCGATCATCGTTTCA tdh 2303252 - 2302218 - | L-threonine 3-dehydrogenase TERM 1931 2302524 - 2302506 - G 70 -10.2 -3.54741 | opp_overlap 2302506 2302505 GATCATGTCGCGAAA GGCGGGTG CGG CACCCGAC ATTTCCAGGCCGACA Smed_2225 2304480 - 2303293 - | 2-amino-3-ketobutyrate coenzyme A ligase Smed_2226 2306645 - 2304702 - | ATP-dependent DNA helicase RecQ TERM 1932 2306420 - 2306399 - G 95 -10.1 -4.56597 | gap 1, overlap 2306402 CCCCGGTCGGAAAAA GCACGACGGC ATC GCCGCCG-GC AACCACATGCTCGAT dnaG 2308670 - 2306655 - | DNA primase TERM 1933 2308122 - 2308106 - G 72 -13.7 -2.70932 | opp_overlap 2308105 CCGGTCCGTGAACGA CGAGGCC ACA GGCCTCG ATCTGCTCCTTGCCG TERM 1934 2308535 - 2308516 - G 79 -9.2 -4.18018 | opp_overlap 2308504 TCCTCGCAGTGAAAA CTCGGCGA TTTT TCGCCGTG AAAGGGGCAGCAGGC TERM 1935 2308832 - 2308864 + r 76 -11.8 -3.34013 | overlap 2308842 AATGCAAATGCCAGG GAGGCGACGCCCGC CGGAA GCGGGCGCCGCGAC TTACTTCAGGAGGTC Smed_2228 2309314 - 2308865 - | GatB/Yqey domain-containing protein TERM 1936 2310697 - 2310721 + G 71 -13.6 -2.5474 | gap 1, opp_overlap 2310694, overlap 2310696 2310696 CGACGGCACCAATTG CGGCCTGCGCG TCGA CG-GCAGGCCG GTCTTCTCGGTCCAG TERM 1937 2310835 - 2310818 - g 71 -5.5 -4.30987 | opp_overlap 2310825, overlap 2310819 2310820 ATTCGTGAGAAGAAA GGCGAAC CGGC ACTCGCC GAGCGCTGAGCCGTT Smed_2229 2309639 - 2310844 + | carbamoyl phosphate synthase small subunit TERM 1938 2310856 - 2310874 + T 84 -13.1 -3.67597 | CTGAGCCGTTTTCAG GGCCCGC CTCGT GCGGGCC TTCTTGCCTCAGCCG Smed_2230 2311773 - 2310883 - | LysR family transcriptional regulator TERM 1939 2312378 - 2312398 + G 71 -14 -2.62983 | opp_overlap 2312388, overlap 2312375 CTTCGCTTCCGTGCT CGCGGCAG AACTG CTGCCGCG TGGTATCCGCGTCAA Smed_2231 2311887 - 2312648 + | short-chain dehydrogenase/reductase SDR Smed_2232 2312675 - 2313541 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 1940 2313650 - 2313600 - T 100 -31.6 -3.34522 | opp_overlap 2313610 2313617, overlap 2313601 2313617 AGATCGCTGAATCAA GTTCTGAACATGAAAAAGCCCGCC GAT GGCGGGCTTTTTCATGTTCAGAAG TCGTGAGGAGGCTAT TERM 1941 2313649 - 2313601 - T 100 -35.1 -2.60392 | opp_overlap 2313610 2313617, overlap 2313600 2313617 GATCGCTGAATCAAG TTCTGAACATGAAAAAGCCCGCC GAT GGCGGGCTTTTTCATGTTCAGAA GTCGTGAGGAGGCTA TERM 1942 2313610 - 2313640 + T 100 -22.8 -3.03441 | opp_overlap 2313601 2313600 2313617, overlap 2313617 ATCAAGTTCTGAACA TGAAAAAGCCCGCC GAT GGCGGGCTTTTTCA TGTTCAGAAGTCGTG TERM 1943 2313633 - 2313617 - T 100 -15.1 -4.87626 | opp_overlap 2313610 2313617, overlap 2313601 2313600 TCTGAACATGAAAAA GCCCGCC GAT GGCGGGC TTTTTCATGTTCAGA TERM 1944 2313617 - 2313633 + T 100 -15.1 -4.87626 | opp_overlap 2313617 2313601 2313600, overlap 2313610 TCTGAACATGAAAAA GCCCGCC GAT GGCGGGC TTTTTCATGTTCAGA Smed_2233 2314864 - 2313662 - | aspartate aminotransferase TERM 1945 2314461 - 2314447 - G 73 -7 -4.34402 | overlap 2314448 CGGTCGAGACGAAAA CCGGCG TAC CGCCGC ATAGCGCCACCATTT Smed_2234 2315185 - 2315382 + | hypothetical protein Smed_2235 2315351 - 2315647 + | hypothetical protein TERM 1946 2316093 - 2316115 + G 79 -13.4 -3.39803 | opp_overlap 2316078 GGGCGTACCCACAGT GGCCGCCC ACGGCCA GGGCGGCC TTCTCGATGTCGCTC TERM 1947 2316685 - 2316696 + G 71 -5.8 -4.25104 | opp_overlap 2316679 2316680 GCGAAGGAAGGCCTG GAGC AGCC GCTC TTTTACTGGGACCCC Smed_2236 2315788 - 2316978 + | glucose sorbosone dehydrogenase TERM 1948 2317715 - 2317740 + G 71 -12.5 -3.02263 | opp_overlap 2317708 GTCAATGACGCAGTT CGCCGTCTGCG CCAT CGCAGGCTGCG TATTGGCCGGCCTGT TERM 1949 2317900 - 2317920 + G 72 -3.8 -4.652 | overlap 2317898 2317902 2317914 2317916 CCATCTTCCTCTCGA GCGAGGCG CTTTT CGCCGCCC TTTTTGGCGTGCTTT Smed_2237 2317161 - 2318063 + | hypothetical protein TERM 1950 2318583 - 2318552 - f 83 -5.6 -4.87803 | opp_overlap 2318580 GATCTTGAAATAAAA GCGGGCCGGAGACG CAAC CCACTCCGGGCGGC CAACGGGGGAGGCTG TERM 1951 2318580 - 2318598 + F 74 -2.2 -4.90266 | opp_overlap 2318552 GCAACCCACTCCGGG CGGCCAAC GGG GGAGGCTG TTTTTCCTTCCTGCG Smed_2238 2318728 - 2318943 + | cold-shock DNA-binding domain-containing protein TERM 1952 2318975 - 2318992 + F 100 -12.7 -5.26875 | AAACTTACGCTCGAG CCCGGCA TTTT TGCCGGG TTTTTTCGTTCAGGC Smed_2239 2319088 - 2319504 + | hypothetical protein TERM 1953 2319528 - 2319555 + T 100 -15.7 -4.96468 | opp_overlap 2319531 GCGGCATTATCCGAA GGACGCATGAC CGCGAA GTCATGCGTCC TTTTATTTGAGTTTA Smed_2240 2320222 - 2319581 - | beta-lactamase domain-containing protein Smed_2241 2320486 - 2320331 - | hypothetical protein TERM 1954 2320550 - 2320538 - H 74 -6.2 -4.5442 | overlap 2320540 CGGCGAATGAGAAAA GCCG GGCCT CGGC CACGCGCCAGTCCGA Smed_2242 2320673 - 2321305 + | hypothetical protein TERM 1955 2321376 - 2321329 - f 100 -17.1 -4.81083 | gap 2, overlap 2321330 2321331 CGGAAGCACGAAAAA TCTGACCGAGGCGCAACGCCGTC AATA GCAGGCGTTGCGCCTCGG-C-GA ATCACTCGGCAAAGC TERM 1956 2321377 - 2321330 - f 100 -18.4 -3.47927 | overlap 2321329 2321331 GGAAGCACGAAAAAT CTGACCGAGGCGCAACGCCGTC AATA GCAGGCGTTGCGCCTCGGCGAA TCACTCGGCAAAGCG TERM 1957 2321376 - 2321331 - f 95 -19.7 -2.68033 | overlap 2321329 2321330 GAAGCACGAAAAATC TGACCGAGGCGCAACGCCGTC AATA GCAGGCGTTGCGCCTCGGCGA ATCACTCGGCAAAGC Smed_2243 2321626 - 2321892 + | hypothetical protein TERM 1958 2321939 - 2321924 - f 100 -11.8 -4.43477 | opp_overlap 2321924 TCGATGCAAGCAAAA GGCGGC CGCG GCCGCC TTTTTTGTGGGCTAT TERM 1959 2321924 - 2321939 + F 100 -11.8 -5.26918 | opp_overlap 2321924 TCGATGCAAGCAAAA GGCGGC CGCG GCCGCC TTTTTTGTGGGCTAT Smed_2244 2322086 - 2322568 + | MarR family transcriptional regulator Smed_2245 2322842 - 2323543 + | two component transcriptional regulator Smed_2246 2323543 - 2324961 + | integral membrane sensor signal transduction histidine kinase Smed_2247 2325404 - 2325063 - | export-related chaperone CsaA Smed_2248 2326399 - 2325437 - | LysR family transcriptional regulator Smed_2249 2327476 - 2326652 - | pyrroline-5-carboxylate reductase TERM 1960 2326806 - 2326848 + g 71 -11.3 -3.53012 | gap 1, overlap 2326807 CGCAGGCGCGCTGCA TCGTCG-GGGGACTGATGGA GGAG TTCACCAGCCCCCGCGACGG TTTCCCGAGCGAGAC Smed_2250 2327978 - 2327478 - | hypothetical protein TERM 1961 2328265 - 2328294 + r 75 -4.3 -4.78029 | overlap 2328289 GACTCTGCGATAAAG GTTTTTTGCCAGT GTCC ACAGGTGGAAAAC TTTTCGTTTTGTTAG Smed_2251 2328724 - 2328434 - | hypothetical protein TERM 1962 2329671 - 2329692 + G 83 -9.5 -4.28762 | gap 1 ACCGGCATATTCGTC TGCGGCTATG CCG CA-AGCCGCA TTTTCGTGGAGTTCT Smed_2252 2328999 - 2329841 + | prolipoprotein diacylglyceryl transferase Smed_2253 2329853 - 2330956 + | hypothetical protein Smed_2254 2331084 - 2331878 + | hypothetical protein Smed_2255 2331880 - 2333031 + | peptidase M24 TERM 1963 2333195 - 2333174 - f 71 -12.9 -2.50016 | opp_overlap 2333156, overlap 2333171 CGGGATGAGGAAGAG TGCGGGCGG CTTT CCGCCCGCG TCCCGCGTCTCAACT TERM 1964 2334016 - 2333980 - g 81 -15.9 -3.10056 | opp_overlap 2333966, overlap 2333969 2334006 ACGACGGAGGCAAGA CCACCGTCGTCTATGTC TGG GACATACTCGACGGCGG CGGCAATCGCCTCCA Smed_2256 2333289 - 2334167 + | hypothetical protein TERM 1965 2334366 - 2334321 - f 79 -7.5 -4.64598 | gap 1, overlap 2334312 CAAGGACGCTAAAAA GCGGCCGATCAGCT-CTGACGG CGG CCGTCCGCAAGTGATTGCCCGC AATCGGAATGGCTCA Smed_2257 2334452 - 2335384 + | ribose-phosphate pyrophosphokinase Smed_2258 2336266 - 2335436 - | hypothetical protein TERM 1966 2335916 - 2335891 - G 76 -8.1 -4.19238 | overlap 2335892 GGCTGAACTCGAAAA CGCGGTCGGCG GCAT CGCCGGTCGCA TCCTCGATCGAGCCG TERM 1967 2336232 - 2336208 - G 76 -10 -3.84246 | opp_overlap 2336225 2336227 2336229 TTGGGAATTACGAAA GCGCCCTG ACGATCATG CAGGGCGC GGAATGCCCTGTGCT Smed_2259 2336719 - 2336339 - | hypothetical protein TERM 1968 2336781 - 2336742 - R 88 -14.3 -3.53012 | gap 1 CTCCTCCTTCGCAAA TGCCGCAGGGCCCCCGAC GAACG ATCGGGAGCCC-GCGGGA TCGATAGGTTTCAGC Smed_2260 2338309 - 2336801 - | aldehyde dehydrogenase TERM 1969 2337240 - 2337267 + g 76 -6.3 -4.39828 | ACGTCCGCGCCTTCC TCCTTGCCGAT CTCGAT ATAGGCGAGGA TTTTCTCGAGCTGTT Smed_2261 2339404 - 2338448 - | Fis family transcriptional regulator TERM 1970 2340130 - 2340156 + G 76 -5.9 -4.62471 | gap 1, overlap 2340132 AGCCTGTGCTTCGCG CCGGTT-AAGGC GGTC GCCTTCAACCCG TTTTTCGGCCTTCCG Smed_2262 2339662 - 2340894 + | benzoate transporter TERM 1971 2341030 - 2341054 + F 86 -8.5 -4.64657 | opp_overlap 2341036, overlap 2341031 2341032 CTTGGAGGCAACGTG GATGAAGCCGC CCT GCGGCTTCAGG TTTTTCCGCCTTTGA TERM 1972 2341031 - 2341053 + F 76 -12 -3.38071 | opp_overlap 2341036, overlap 2341030 2341032 TTGGAGGCAACGTGG ATGAAGCCGC CCT GCGGCTTCAG GTTTTTCCGCCTTTG TERM 1973 2341032 - 2341052 + F 81 -15.5 -2.6212 | opp_overlap 2341036, overlap 2341031 2341030 TGGAGGCAACGTGGA TGAAGCCGC CCT GCGGCTTCA GGTTTTTCCGCCTTT Smed_2263 2341107 - 2341730 + | 50S ribosomal protein L25/general stress protein Ctc TERM 1974 2341785 - 2341808 + F 86 -12.4 -4.08485 | opp_overlap 2341785 TCCCCGTATAGAGAA CCCGTCCCAT TTGC GTGGGGCGGG TTTCGTTTAAATGCG Smed_2264 2342028 - 2342774 + | peptidyl-tRNA hydrolase clpS 2343102 - 2342797 - | ATP-dependent Clp protease adaptor TERM 1975 2342993 - 2342973 - G 72 -3.9 -4.62069 | CGCTCATCCGAAAAA TGGCCTTGA GCA CCATGACCA CGAATTCCCGCGGCG Smed_2266 2343331 - 2344434 + | translation-associated GTPase Smed_2267 2345523 - 2344465 - | hypothetical protein Smed_2268 2345792 - 2346247 + | dehydratase Smed_2269 2346244 - 2346714 + | dehydratase Smed_2270 2347278 - 2346736 - | adenine phosphoribosyltransferase Smed_2271 2347452 - 2347637 + | hypothetical protein Smed_2272 2348929 - 2347670 - | polynucleotide adenylyltransferase region Smed_2273 2349558 - 2348926 - | NUDIX hydrolase Smed_2274 2350178 - 2349555 - | hypothetical protein Smed_2275 2350541 - 2351554 + | ATPase Smed_2276 2351558 - 2352478 + | hypothetical protein TERM 1976 2352683 - 2352697 + G 72 -7.8 -4.11216 | overlap 2352658 TTCTCAGAATGCTGA TGGCGG CGG CCGTCA TTTTCGCGATAGCCG Smed_2277 2352475 - 2355288 + | hypothetical protein TERM 1977 2357135 - 2357118 - g 100 -6.3 -5.68438 | gap 1, overlap 2357119 2357120 CCACGAAAGAAAAAA TC-CAGCC ATG GGCTGAGA AGACCAAGGGACTCG TERM 1978 2357133 - 2357119 - g 70 -7.8 -3.99436 | overlap 2357118 2357120 CACGAAAGAAAAAAT CCAGCC ATG GGCTGA GAAGACCAAGGGACT Smed_2278 2355299 - 2357368 + | hypothetical protein Smed_2279 2357347 - 2357838 + | GCN5-related N-acetyltransferase Smed_2280 2358399 - 2357839 - | GCN5-related N-acetyltransferase TERM 1979 2358024 - 2357995 - G 70 -10.1 -3.57462 | gap 1, opp_overlap 2358002 GACGGGACCCGGAAA TTCGAG-AGCTCCG TGA CGGACCTTCTCGAA ACCGAGTGGCTGGTA TERM 1980 2358089 - 2358067 - G 71 -13.4 -2.66216 | overlap 2358066 GCCGACGAGGATAAC CGCTTCGGAG CCC CTCCGACGCG CCGCATCCACTGCAA TERM 1981 2359601 - 2359579 - g 71 -13.4 -2.54192 | overlap 2359578 CATACCACGATCAAT CCCACGGGCA TCG TGCCGGTGGG GCCGGCGCTCGACCT Smed_2281 2358655 - 2359647 + | putative glutathione S-transferase Smed_2282 2360149 - 2359658 - | NUDIX hydrolase TERM 1982 2360870 - 2360896 + G 88 -16.7 -3.28712 | overlap 2360859 GCCGGTTCGCCGCGA CCATTTCGGCC GGCGG GGCCGAAATGG TTCTGCACGGCCACA Smed_2283 2360230 - 2361132 + | metallophosphoesterase TERM 1983 2361554 - 2361573 + G 84 -10.7 -4.11216 | opp_overlap 2361536 2361535 CAAGCGCAAGGTGCG CAGCGGC AGTGCG GCCGCTG TTTTCGAACTGGACC Smed_2284 2361258 - 2361827 + | ECF subfamily RNA polymerase sigma-24 factor Smed_2285 2361831 - 2362658 + | putative transmembrane anti-sigma factor Smed_2286 2363262 - 2363011 - | transcription factor Smed_2287 2365042 - 2363312 - | 2-isopropylmalate synthase Smed_2288 2365280 - 2365059 - | hypothetical protein TERM 1984 2365417 - 2365367 - R 82 -13.8 -3.2048 | opp_overlap 2365381 2365387, overlap 2365358 GGGAAAGCGGAGCAA GAGTGCGGGCAGAGGGTATCGGCG CGC CGCCGCCCCCTTCTCCCCGCAACC GGGAAGAAGGGGGCG Smed_2289 2366043 - 2365456 - | ATP-dependent Clp protease proteolytic subunit TERM 1985 2366571 - 2366606 + G 86 -8.2 -4.57073 | overlap 2366580 CCGTCCGGCTCGATG TTTCGATGGCTGCGGC CGTC GTCGCAGTCTTCGCGA TTTTTCACGGGCATG Smed_2290 2366234 - 2366812 + | HupE/UreJ protein TERM 1986 2367235 - 2367222 - g 71 -8.1 -3.85698 | GGTGCGTTGGAGAAA GGTCG CCTT CGACC CCATACTCAGGATCG Smed_2291 2366812 - 2367318 + | GCN5-related N-acetyltransferase Smed_2292 2368106 - 2367285 - | aminoglycoside phosphotransferase TERM 1987 2367453 - 2367442 - G 77 -4.4 -4.82333 | AGAAGAAGCGAAAAA TCGA CATA TCGA TCCGCCGTTCCGAGC Smed_2293 2368599 - 2368135 - | 7-cyano-7-deazaguanine reductase Smed_2294 2369516 - 2368596 - | cation diffusion facilitator family transporter TERM 1988 2368625 - 2368641 + g 72 -7.9 -4.19506 | overlap 2368626 CTCCGCTCACTTTAA CGCGCAC GCC GTGCGCC TTTTCGCCTTCCGGT TERM 1989 2368842 - 2368857 + g 70 -11.8 -3.18735 | opp_overlap 2368830, overlap 2368843 2368845 CGACCCGCCGGCATT GGCGGC GATC GCCGCC TTGATCGCCTCTTCC TERM 1990 2369480 - 2369494 + g 74 -5.6 -4.46926 | opp_overlap 2369479 GTATGCCCCAGAAGG CCAGCC GCA GGATGG TTTTGTCGTCGGATC TERM 1991 2369602 - 2369575 - R 100 -17.7 -4.36595 | opp_overlap 2369575 2369574 CATTCAAACGCAAAA CCGCCCGCGCG GATTTT CGCGCAGGCGG ATGATGGGAGCCATA Smed_2295 2371865 - 2369676 - | anthranilate synthase TERM 1992 2371941 - 2371918 - R 100 -11 -4.90906 | gap 1 CCAGAATACGAAAAA GCCGCCTCGAA ATC TCCG-GGCGGC TCCAACTCTCAATCA TERM 1993 2372120 - 2372102 - R 100 -13.1 -4.64861 | opp_overlap 2372101 2372112 TCCTGTCAAAAGAAA GGCGGCC ATCGG GGCCGCC CCTTGATGCATGCCT Smed_2296 2374347 - 2372143 - | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor TERM 1994 2374019 - 2374038 + g 72 -12.1 -3.26031 | overlap 2374017 2374015 ATCGTCGTCAGCACG CGCGGCC CTTCGA GGCCGCG TATATTTACGCTGCC TERM 1995 2375126 - 2375116 - g 84 -8.2 -4.49556 | overlap 2375117 2375118 GGTGGACCAAAGAAA CGGC AGC GCCG GCCGCAAGGAGCGCC Smed_2297 2374629 - 2375471 + | extensin family protein Smed_2298 2377222 - 2375519 - | formate--tetrahydrofolate ligase TERM 1996 2376085 - 2376143 + g 77 -4.5 -4.86731 | gap 2, overlap 2376084 2376101 CCGGTACGCCGAACT TCTTGA--CGTTCTGGATGTGGCGCCCGA GGT TCGGGCACCCCTTCCTGAGCGCTTCGACA TTTTCTTTCGCGAGA Smed_2299 2378503 - 2377283 - | hypothetical protein TERM 1997 2377360 - 2377344 - G 77 -2.1 -5.00895 | opp_overlap 2377346, overlap 2377345 2377346 CGCAGGATATAAAAA CCCATCG TCG CGAGGTG CGTTGGCATGATCCA TERM 1998 2378012 - 2377994 - G 86 -8.8 -4.59773 | GTCGACCCCGAAAAA GCCGAGCT TGT AGCCCAGC ATCGACGATATCCAC Smed_2300 2379796 - 2378507 - | hypothetical protein TERM 1999 2379618 - 2379636 + g 83 -14.6 -3.53012 | opp_overlap 2379613 TCCAGATAATCGCGG TCGCCGAG CTC CTCGGCGA TTTCCGGAGAAAAGC Smed_2301 2380233 - 2379793 - | hypothetical protein Smed_2302 2382327 - 2380411 - | hypothetical protein Smed_2303 2383479 - 2382331 - | hypothetical protein Smed_2304 2384629 - 2383541 - | hypothetical protein TERM 2000 2383616 - 2383658 + g 71 -5.5 -4.29738 | gap 1, overlap 2383620 GAAGGCGTCGTCGGC GAGT-TTCTTGCGCCGCTGG ATAT CCTGCGTCGCAAGCATGTTC TTTTCATGCATCTCC TERM 2001 2383620 - 2383653 + g 76 -10.9 -3.72481 | overlap 2383616 GCGTCGTCGGCGAGT TTCTTGCGCCGCTGG ATAT CCTGCGTCGCAAGCA TGTTCTTTTCATGCA TERM 2002 2383811 - 2383837 + g 70 -11.6 -3.13728 | TTTCAGCGAATCCTC CAGCGCCTTGTA AAG TACGATGCGCTG TTCGGTGTCGATCGT Smed_2305 2384946 - 2385902 + | substrate-binding region of ABC-type glycine betaine transport system TERM 2003 2385979 - 2385997 + F 100 -13.1 -5.0133 | GGATGCGTGCAGTGA GGCGGGG AAACA CCCCGCC TTTTTTCCACCGGTC TERM 2004 2386267 - 2386277 + G 76 -8.2 -4.18401 | GTTTCGCCGGTCCAT CGGC ATT GCCG TTTTCACCTGTCTCG Smed_2306 2386055 - 2386900 + | binding-protein-dependent transport systems inner membrane component Smed_2307 2386897 - 2387946 + | ABC transporter related Smed_2308 2387981 - 2388724 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Smed_2309 2388843 - 2389187 + | regulatory protein ArsR TERM 2005 2389229 - 2389252 + F 100 -13.2 -4.81357 | gap 1 GCAATGCCTGATTGA GCCCCGCCGAT TCG AT-GGCGGGGC TTTGTTTTCTGCTGT TERM 2006 2389368 - 2389335 - g 74 -5.2 -4.56597 | gap 2, overlap 2389336 2389338 CCGGCTCGGGAAAAA CCACGACGGCGCAGGC GCTT GCC-GCAGCGCCG-GG ATTACCCAAGGTCCA Smed_2310 2389280 - 2389858 + | hypothetical protein TERM 2007 2389901 - 2389919 + T 72 -9.6 -3.63627 | opp_overlap 2389873 2389871 2389870 CTAGGTCGATCCGAC CTGGATCA TCG TGATCCGG TTTGGCGTGTCCCCG Smed_2311 2391042 - 2389957 - | ABC transporter related Smed_2312 2392242 - 2391046 - | hypothetical protein TERM 2008 2391822 - 2391808 - G 80 -5.7 -4.77079 | GATATAGTAATAAAA GAGCA GATCG TGCTC GGCTTCATTGGTGAT TERM 2009 2391979 - 2391964 - G 76 -6 -4.59773 | overlap 2391966 CCCCATGCCGAAAAA GTCGCC GATC GGCGCC TCGATGCTGGGCGCG Smed_2313 2393111 - 2392269 - | binding-protein-dependent transport systems inner membrane component Smed_2314 2394036 - 2393104 - | binding-protein-dependent transport systems inner membrane component TERM 2010 2393979 - 2394006 + g 77 -2.1 -5.07652 | gap 2, overlap 2393988 2393989 2393991 CGATCCATTCGCGAT TTCGGGCCGACAG GCGG CTGT-G-CCTGAA TTTTGTTTTGGGACG Smed_2315 2395534 - 2394167 - | extracellular solute-binding protein TERM 2011 2394793 - 2394807 + g 76 -5.6 -4.66163 | overlap 2394788 CCTGCACGGTCGCGG GCGAGT CGA ACGCGC TTTTTCCCTCGGCGT TERM 2012 2395453 - 2395427 - G 71 -9.2 -3.78329 | GTTGATGAACGGAAA GCCGCTCAGGCC GCC GGCCAGTCCGGC GGCGGCGAAGGTTGC Smed_2316 2396600 - 2395596 - | alanine racemase TERM 2013 2396430 - 2396462 + g 100 -17 -3.86015 | overlap 2396455 GACGATATTGGTGCG CCCCGTCCGCAGGC TCTGC GCCTGCGGATTGGG TTTGTAACCGAGATC TERM 2014 2396625 - 2396640 + H 100 -6.2 -5.78622 | opp_overlap 2396625 CATTACGCAAAAAAA TCGATT TGCA AATCGA TTTTTTTTACCGTCG TERM 2015 2396640 - 2396625 - H 95 -6.2 -5.48825 | opp_overlap 2396625 CATTACGCAAAAAAA TCGATT TGCA AATCGA TTTTTTTTACCGTCG TERM 2016 2397490 - 2397537 + G 71 -11.2 -3.40403 | gap 1, overlap 2397482 CGCTTCATGACGCCT CGACGGTCGCGGCGGTCATCG TTGAACC CG-TGGCCGGCTCGACCGGCG TTCTCATCCCGCCGA TERM 2017 2398163 - 2398122 - g 78 -5.3 -4.68593 | CTGATCATCGAAAAA CAGCAGATCGACG-AGCTT TTCGAC AAGCTACG-CGACGTGCTG AAGAACAATATCTGA Smed_2317 2396850 - 2398178 + | beta amino acid--pyruvate transaminase TERM 2018 2398202 - 2398227 + F 100 -16.9 -3.85864 | overlap 2398194 CTGCCATGTGCGAGG CCCTTTCCCCG ACCG CGGGGAGAGGG TTATTGTCATGATCA Smed_2318 2398265 - 2399962 + | adenine deaminase Smed_2319 2400481 - 2400098 - | XRE family plasmid maintenance system antidote protein Smed_2320 2402272 - 2400629 - | alpha amylase catalytic region Smed_2321 2402407 - 2403339 + | ribokinase-like domain-containing protein TERM 2019 2403338 - 2403396 + T 100 -29.1 -3.53343 | gap 1, opp_overlap 2403354 GCGCGCAATTCGCGT GAGGATGGCGGCAATACCCCCTCTGCCC GGCA GGGCAGAGGGGGTATTGCC-CTACCCGC TTTGCGCCACCGCTT TERM 2020 2403381 - 2403354 - T 100 -22.8 -3.0263 | opp_overlap 2403338 AGGATGGCGGCAATA CCCCCTCTGCCC GGCA GGGCAGAGGGGG TATTGCCCTACCCGC Smed_2322 2404156 - 2403389 - | ABC transporter related Smed_2323 2404986 - 2404153 - | ABC transporter related Smed_2324 2405942 - 2404983 - | binding-protein-dependent transport systems inner membrane component Smed_2325 2406982 - 2405939 - | binding-protein-dependent transport systems inner membrane component TERM 2021 2406953 - 2406985 + g 70 -9.8 -3.67878 | gap 1, overlap 2406956 2406957 2406959 GGCGACAAACGCCTT CCGG-GAACGGGCGC GCCG GCGCCCGCTCATTGG TTCTGTTCCGATGAT TERM 2022 2406956 - 2406981 + g 70 -10.3 -3.54382 | overlap 2406953 2406957 2406959 GACAAACGCCTTCCG GGAACGGGCGC GCCG GCGCCCGCTCA TTGGTTCTGTTCCGA TERM 2023 2406957 - 2406980 + g 72 -13.8 -2.72147 | overlap 2406956 2406953 2406959 ACAAACGCCTTCCGG GAACGGGCGC GCCG GCGCCCGCTC ATTGGTTCTGTTCCG Smed_2326 2408664 - 2407024 - | extracellular solute-binding protein TERM 2024 2408213 - 2408187 - G 76 -8.6 -4.11216 | opp_overlap 2408186 2408203, overlap 2408191 GGTCGACCGTGAAAA CAAAGGTCTCCG GGT CGGCGGCCTTCG CCTTTTCCGTGACAT TERM 2025 2408209 - 2408191 - G 76 -5.8 -4.65933 | opp_overlap 2408186 2408203, overlap 2408187 GACCGTGAAAACAAA GGTCTCCG GGT CGGCGGCC TTCGCCTTTTCCGTG Smed_2327 2409773 - 2408712 - | peptidase M19 renal dipeptidase Smed_2328 2410303 - 2409962 - | small multidrug resistance protein Smed_2329 2410907 - 2410347 - | TetR family transcriptional regulator Smed_2330 2411046 - 2411438 + | globin TERM 2026 2411519 - 2411549 + G 72 -11.8 -3.30243 | GGAGTCGCGAGTGCC GCCGCGGCTTCG CATGGCA CGGATCCGCGGC TTCTCGGCGGTGCGT TERM 2027 2411553 - 2411603 + G 71 -8.1 -3.86897 | gap 2, overlap 2411554 2411591 CGGATCCGCGGCTTC TCG-GCGGTGCGTCGGC-CATGTGC CTG GCGCACGCGCCGGCGCTCCTCGCGC TTTATGCCGGATGGG Smed_2331 2411444 - 2411812 + | hypothetical protein Smed_2332 2412218 - 2411904 - | antibiotic biosynthesis monooxygenase Smed_2333 2412513 - 2412223 - | hypothetical protein Smed_2334 2412998 - 2412573 - | hypothetical protein Smed_2335 2414248 - 2413322 - | TonB family protein Smed_2336 2414736 - 2414302 - | hypothetical protein Smed_2337 2414863 - 2415111 + | hemin uptake protein-like protein TERM 2028 2415865 - 2415855 - g 71 -8.2 -3.86346 | opp_overlap 2415834 2415830, overlap 2415834 GCAGTGCCGCAGAAA CGGC GCT GCCG ATCATGTGCTTCGTA Smed_2338 2415116 - 2416183 + | hemin-degrading family protein TERM 2029 2416270 - 2416288 + F 77 -8 -4.26076 | overlap 2416269 GAGATAGGGCGGGAT GCGGGCGG AAA CCGCATGC TTTTCATCCCGCTCC Smed_2339 2416320 - 2417270 + | periplasmic binding protein Smed_2340 2417275 - 2418390 + | transport system permease protein Smed_2341 2418399 - 2419187 + | hemin importer ATP-binding subunit TERM 2030 2419559 - 2419549 - g 71 -8.2 -3.9373 | overlap 2419543 GACGCAAAAGCCAAA GCGC GTG GCGC CCGTGACCAGGCCGA Smed_2342 2419384 - 2419746 + | hypothetical protein Smed_2343 2419789 - 2420220 + | hypothetical protein Smed_2344 2421807 - 2420305 - | signal transduction histidine kinase TERM 2031 2421534 - 2421523 - G 70 -7.2 -3.99592 | opp_overlap 2421523 2421530 ATCGAGCACGACAAA GGCG CCGT CGCC TTCTGCGATCGTATG Smed_2345 2422607 - 2422053 - | RNA polymerase sigma factor Smed_2346 2422809 - 2422615 - | hypothetical protein TERM 2032 2422867 - 2422883 + H 84 -2.2 -5.40072 | opp_overlap 2422849 2422867 2422868, overlap 2422868 CGGGAAAATTTGAAA TGTTCC ACAGC GGAACC TTTTTTTCGCCGGAA Smed_2347 2422944 - 2423738 + | two-component response regulator TERM 2033 2423742 - 2423719 - T 72 -8.8 -3.90112 | opp_overlap 2423726 2423727, overlap 2423727 TGTTCTTCAACGAAA CGACCAAGGC TGCG GCCTGAGTCG AGGGCGTAGCGTTTC TERM 2034 2423831 - 2423793 - T 87 -14.8 -3.45536 | gap 1, overlap 2423786 2423796 AGAACGAAGCTAGAA CAGGTCATGCTGCCCGT CGCCTC ACGGACAGCATGA-CTG CGATCGGTGATCGGC TERM 2035 2423829 - 2423796 - T 87 -17.6 -2.56806 | overlap 2423793 2423786 ACGAAGCTAGAACAG GTCATGCTGCCCGT CGCCTC ACGGACAGCATGAC TGCGATCGGTGATCG Smed_2348 2424488 - 2423913 - | hypothetical protein Smed_2349 2424865 - 2424491 - | MFS family transporter Smed_2350 2424961 - 2425857 + | LysR family transcriptional regulator TERM 2036 2425937 - 2425908 - T 85 -15.1 -3.14878 | overlap 2425906 GCCCCGAACGCAAGA CAGCCAGTGCC GAGGGAAG GGCACTGGCTG AGCTTAGGCAACTCA TERM 2037 2426107 - 2426093 - T 85 -11.4 -4.0492 | opp_overlap 2426088, overlap 2426082 CAATTCGCAGATAAA CGGCGA CCT TCGCCG ATCACGTTATTCTAT Smed_2351 2427700 - 2426114 - | FGGY-family pentulose kinase TERM 2038 2426951 - 2426986 + g 70 -10.2 -3.61517 | ATAGGCGTCGATCAG CCCGGGCGCCACCCGG CATT CCGCGTCGAGCCCGAG TTCTTCCGCCGCGCT TERM 2039 2427761 - 2427751 - R 71 -6.8 -4.15044 | opp_overlap 2427753, overlap 2427752 TTGCCGCCGAAGAAA CGGT GCG ACCG GAAAACCGTCACACG Smed_2352 2428478 - 2427810 - | HAD family hydrolase Smed_2353 2429965 - 2428481 - | mannitol dehydrogenase domain-containing protein Smed_2354 2430767 - 2429994 - | sorbitol dehydrogenase Smed_2355 2431765 - 2430764 - | ABC transporter related Smed_2356 2432643 - 2431813 - | binding-protein-dependent transport systems inner membrane component Smed_2357 2433521 - 2432649 - | binding-protein-dependent transport systems inner membrane component TERM 2040 2433663 - 2433606 - R 71 -7.5 -4.24002 | overlap 2433607 2433610 GGTTAAATCGGAAAA GTCAGAGCGGAACGCGGATCGAAGGCA GGTA TGGCCCCTTTCCCCGTCCCGCTCTGGA GGTAGCCGGAGGGCA Smed_2358 2435039 - 2433714 - | extracellular solute-binding protein TERM 2041 2434815 - 2434839 + g 73 -6.4 -4.2558 | gap 1 CTTGGTCGCAATGTC CGTCGTGACGC GCTG GCG-CAGGACG TTTTCCTCAAGAGTG Smed_2359 2436152 - 2435199 - | DeoR family transcriptional regulator TERM 2042 2436883 - 2436873 - g 73 -8.2 -4.08216 | CGATGCGCGCGAAAA GGCC GGT GGCC TGAACGAATACGGCA TERM 2043 2437174 - 2437155 - g 84 -10.7 -4.20368 | CCAGTCGAAGACAAA GGCCGAC ATTCCG GTCGGCC GGCGCGTCGTGGTGC Smed_2360 2436352 - 2437713 + | putative oxidoreductase Smed_2361 2437744 - 2439057 + | dihydropyrimidine dehydrogenase TERM 2044 2439069 - 2439116 + T 100 -22.8 -2.62735 | gap 1, opp_overlap 2439060 2439075, overlap 2439081 GTGAAAGCCTGTTCA AGCCAAGGG-GAAGGCCGCCGGC ATC GCCGGCGGCCTTTTCCCTTGCCG TCGTCTCAGAACTCT TERM 2045 2439109 - 2439075 - T 100 -21.4 -3.17075 | opp_overlap 2439069 2439081 GCCTGTTCAAGCCAA GGGGAAGGCCGCCGGC ATC GCCGGCGGCCTTTTCC CTTGCCGTCGTCTCA TERM 2046 2439081 - 2439103 + T 100 -22 -4.2803 | opp_overlap 2439075, overlap 2439069 TCAAGCCAAGGGGAA GGCCGCCGGC ATC GCCGGCGGCC TTTTCCCTTGCCGTC Smed_2362 2440225 - 2439122 - | alcohol dehydrogenase TERM 2047 2439696 - 2439680 - G 70 -7.2 -3.97088 | overlap 2439673 TTCGACAAGAGCAAA CCAGGC GGTAA GCCCGG CGCATGGCAGGGTGC TERM 2048 2439814 - 2439798 - G 76 -9.3 -4.08945 | ATGACGCCGGGAAAA GCGCCGC CAA GCGTCGC ATAGGCAGGCGTCCT TERM 2049 2440285 - 2440302 + G 81 -10.5 -4.13767 | overlap 2440299 TCGGTCTTCGTCGAG GTCGCCG ACGC CGGCGGC TTTTCCGCTGCCGCC TERM 2050 2440374 - 2440390 + G 72 -2.1 -4.72272 | opp_overlap 2440374, overlap 2440377 TTCCAGGCTCGAACA GAGGCTC GGT GTGCGTC TTTTTAATCGCACCA TERM 2051 2440504 - 2440481 - g 84 -2.2 -5.27335 | overlap 2440482 TCGGTGAAATAAAAA CGGCCGAGAG CCTC CTCGAGTCCG GGAGGCGCGAAATAC Smed_2363 2440249 - 2441148 + | LysR family transcriptional regulator TERM 2052 2442390 - 2442410 + G 93 -14.7 -4.09685 | opp_overlap 2442378 AATGCCGGCGGCCGC GAGCGCCGC GTG GCGGTGCTC TTTTGCGACCTGCGC Smed_2364 2441307 - 2442983 + | putative adenylate/guanylate cyclase Smed_2365 2443797 - 2443156 - | TetR family transcriptional regulator TERM 2053 2444182 - 2444140 - g 70 -10.4 -3.64822 | opp_overlap 2444163, overlap 2444177 ATTCGTTGATGGAAA TGGCGAAGATCGGCCCCGGC GTT GCCGGCGGCAATAACCGCCA GACCTTGACGGATGC TERM 2054 2445262 - 2445285 + G 74 -11.6 -3.4582 | opp_overlap 2445260, overlap 2445260 ACATCTCCAAGGATT GGGCGGCCGC CGGC GCGGACGTCC TCTTTCATGCCGTCC Smed_2366 2444076 - 2445326 + | allantoate amidohydrolase TERM 2055 2445334 - 2445355 + F 100 -15.9 -4.75372 | TGGAATGAGTTTTGC GGGCGGAAC GGTG GTTCCGCCC TTTTTACTGCATGCT Smed_2367 2445501 - 2446955 + | dihydropyrimidinase Smed_2368 2447420 - 2447007 - | cupin 2 domain-containing protein TERM 2056 2447470 - 2447448 - H 70 -4 -4.62302 | GAATACGCTGAAAAA CCCGCAAGAG GCG CCATTGCCGG CAAATCCGCGATTGC TERM 2057 2447792 - 2447776 - g 83 -15.1 -3.1505 | opp_overlap 2447780 ATGACGCCGGAGGAA GCGCGCC GGA GGCGCGC CTATGGCTATGTCTT Smed_2369 2447542 - 2448333 + | ABC transporter related Smed_2370 2448323 - 2448808 + | GCN5-related N-acetyltransferase TERM 2058 2449516 - 2449568 + G 77 -12.6 -3.61398 | gap 1, overlap 2449519 GGCGCGATCGTCGGC GAACTGCCGACCGGTGCGGTCGCCG GACT CGGCGCACGC-CTGCTCGCCGGTTC TTATTACGGCCAGAC TERM 2059 2449519 - 2449565 + G 71 -8.5 -3.9461 | gap 1, overlap 2449516 GCGATCGTCGGCGAA CTGCCGACCGGTGCGGTCGCCG GACT CGGCGCACGC-CTGCTCGCCGG TTCTTATTACGGCCA Smed_2371 2448811 - 2449695 + | binding-protein-dependent transport systems inner membrane component TERM 2060 2450297 - 2450308 + G 72 -7.2 -4.19735 | overlap 2450294 CAAGCTCCGCTTGCC GGCC GCCT GGCC TTTCATTTTCAACGC TERM 2061 2450342 - 2450372 + G 81 -14 -3.61398 | CAAGATTAACTCCAC CTTGGCCCTGATCG GTG CGATCGTGGCCGAG TTCTTCGGAACGCCC TERM 2062 2450450 - 2450486 + G 73 -8.5 -4.10161 | opp_overlap 2450458 2450459 TGTCGACATGGTCTG GGCCGAAATCGCCGTCG CGG CGGTGGCTGGCTCGGCC TTTTACGGGGTCGTC Smed_2372 2449692 - 2450561 + | binding-protein-dependent transport systems inner membrane component Smed_2373 2450590 - 2451582 + | NMT1/THI5-like domain-containing protein TERM 2063 2452778 - 2452750 - g 81 -13.9 -3.58037 | opp_overlap 2452762 2452763, overlap 2452758 2452759 2452762 CATCAAGGTGGTAAA GACGCAAATCGAC GAC GTCGACCTGCGCC TCGCCCGCACCGCAG Smed_2374 2452181 - 2453368 + | RND family efflux transporter MFP subunit Smed_2375 2453384 - 2456695 + | acriflavin resistance protein TERM 2064 2456706 - 2456756 + F 71 -8.3 -4.08216 | gap 1, opp_overlap 2456720, overlap 2456720 AATAACGTCTCCCGA CTTCGTTGCAGATAGCCCGCGCTT CCTG GAGCGCGGGCTTTCT-CCATGAGC TTTTGACCAAGGTCA TERM 2065 2456743 - 2456720 - f 84 -15.3 -2.87211 | opp_overlap 2456706 2456720 ACTTCGTTGCAGATA GCCCGCGCT TCCTGG AGCGCGGGC TTTCTCCATGAGCTT TERM 2066 2456720 - 2456743 + F 100 -16 -3.92641 | opp_overlap 2456720, overlap 2456706 ACTTCGTTGCAGATA GCCCGCGCTT CCTG GAGCGCGGGC TTTCTCCATGAGCTT Smed_2376 2456829 - 2457509 + | CRP/FNR family transcriptional regulator Smed_2377 2458131 - 2457520 - | urease accessory protein UreG Smed_2378 2458835 - 2458164 - | urease accessory protein UreF ureE 2459292 - 2458828 - | urease accessory protein UreE Smed_2380 2459590 - 2459294 - | antibiotic biosynthesis monooxygenase Smed_2381 2460319 - 2459780 - | peroxiredoxin TERM 2067 2460455 - 2460475 + r 86 -9 -4.57073 | GCCCTCCGCATGGCA GCCATGCG GGCTA TGCATGGC TTTTTCGGCCGGCTG Smed_2382 2461178 - 2460507 - | putative urease-associated protein TERM 2068 2461225 - 2461213 - R 72 -5.5 -4.52415 | ATCTAGAACAAGAAA TAGCG CTG CGCCA TTGGCAGTACCGACG ureC 2462912 - 2461200 - | urease subunit alpha Smed_2384 2463566 - 2462916 - | putative urease accessory protein Smed_2385 2463992 - 2463570 - | hypothetical protein TERM 2069 2463723 - 2463735 + g 74 -4.7 -4.57569 | overlap 2463719 GCGATAGCCGATCCA GGCAC GCT GGGCC TTTTTCAGGGCCTCC ureB 2464294 - 2463989 - | urease subunit beta Smed_2387 2464559 - 2464305 - | hypothetical protein ureA 2464878 - 2464576 - | urease subunit gamma Smed_2389 2465738 - 2464905 - | urease accessory protein UreD TERM 2070 2465164 - 2465136 - G 73 -11 -3.54741 | gap 1 GACGAGGGTTGCAAA GGCGA-CCGCGCC GTCG AGCACGGCTCGCC GCGACCCTAGCGCCG TERM 2071 2465676 - 2465645 - G 74 -13.6 -2.87463 | opp_overlap 2465647 2465672, overlap 2465647 AACCTTCCTGATAGA GACCGGCGATGCGC GTGC GCGCCCCTCCGGTC TTGGCGACGAGCCGT Smed_2390 2466815 - 2465841 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Smed_2391 2467002 - 2468108 + | peptidase A1 pepsin TERM 2072 2468146 - 2468117 - T 100 -19.3 -2.73364 | overlap 2468100 GGTCTAGTTTAACCA GGCGCCGGGAGGA CATG TCCTCCCGGCGCG CCCAAAACGATGGAA TERM 2073 2468190 - 2468154 - T 95 -13.8 -4.07568 | gap 2, opp_overlap 2468159 2468162, overlap 2468162 CCGGCGCGCCCAAAA CGATGGAAGGCCCGGCGC TTG GCGCCGGGCCTTC--TGG ATTACCTTCGAAAAG TERM 2074 2468159 - 2468187 + T 100 -26.1 -2.57013 | opp_overlap 2468154 2468162, overlap 2468162 GCGCCCAAAACGATG GAAGGCCCGGCGC TTG GCGCCGGGCCTTC TGGATTACCTTCGAA TERM 2075 2468162 - 2468184 + T 100 -22 -3.43564 | opp_overlap 2468154 2468162, overlap 2468159 CCCAAAACGATGGAA GGCCCGGCGC TTG GCGCCGGGCC TTCTGGATTACCTTC TERM 2076 2468184 - 2468162 - T 100 -22 -3.19038 | opp_overlap 2468162 2468159, overlap 2468154 CCCAAAACGATGGAA GGCCCGGCGC TTG GCGCCGGGCC TTCTGGATTACCTTC Smed_2392 2469326 - 2468208 - | extracellular ligand-binding receptor TERM 2077 2468279 - 2468292 + g 71 -5.9 -4.25104 | TGACGTAGTCCGGAC GGGTG ATGT CGCCC TTTTCGTCGAAGCCG Smed_2393 2469784 - 2469440 - | hypothetical protein Smed_2394 2470535 - 2469810 - | ABC transporter related TERM 2078 2469914 - 2469945 + g 70 -10 -3.65812 | opp_overlap 2469912, overlap 2469930 TGACCATTACATAGC CGCGATCGGAGAGC TTGA GCGCTCCGAAGGCG TTCTGTTCGACGAGG Smed_2395 2471419 - 2470532 - | ABC transporter related TERM 2079 2471365 - 2471389 + g 85 -2.8 -5.28481 | gap 1, overlap 2471369 CGAAGCGCATCGACA GACGCTCAACC TTCA GGATGGG-GTC TTTTTTCATTGCCTC Smed_2396 2472804 - 2471419 - | inner-membrane translocator TERM 2080 2472787 - 2472735 - G 72 -3.9 -4.57569 | gap 1, opp_overlap 2472748, overlap 2472738 TGAGGCCCGCAAAAA CAGCCTCGCGAAGCGCCCGCGCCG TCAGTT CGCTGCCGGCGCTT-GCGGTGGTG GATGCGACATTTGCC Smed_2397 2473711 - 2472809 - | inner-membrane translocator TERM 2081 2473522 - 2473504 - G 79 -8.8 -4.32034 | overlap 2473517 TCATCATGATCAAAA GCGCCAGT ACA ACCGGCAC ACCGCCAATGAATGT TERM 2082 2473575 - 2473563 - G 81 -10.5 -4.10731 | AAGAATACAATCAAA GCGGC AAA GCCGC CAAGCATGAAAATAT TERM 2083 2473602 - 2473590 - G 71 -9.1 -3.77927 | opp_overlap 2473589 2473588, overlap 2473588 CCAAGCATGAAAATA TCGCC ATG GGCGA AGTTGATCATGCCGA Smed_2398 2474157 - 2474933 + | 3'(2'),5'-bisphosphate nucleotidase Smed_2399 2475369 - 2474983 - | response regulator receiver protein Smed_2400 2476348 - 2475596 - | CRP/FNR family transcriptional regulator TERM 2084 2476682 - 2476660 - g 70 -7.6 -3.98378 | opp_overlap 2476672, overlap 2476657 CATAGCCAAGAACAA CGTCGCCG TCGTTAC CGGCGCCG CCTCCGGCATCGGCC Smed_2401 2476628 - 2477488 + | short-chain dehydrogenase/reductase SDR TERM 2085 2478069 - 2478047 - g 70 -7.6 -4.07687 | ACGTTTCCTCCAAAA CCACTTCGGC TAC GCCGAGACGG GCGCGACAGAGAGCA Smed_2402 2477535 - 2479091 + | glyoxalase/bleomycin resistance protein/dioxygenase Smed_2403 2479649 - 2479092 - | NADPH-dependent FMN reductase TERM 2086 2479474 - 2479492 + g 81 -11.6 -3.92075 | CGCTTGAGCGCCTCT GCGGCGGC CGG GACGCCGC TTTCTGCCTCCAGGT TERM 2087 2479744 - 2479719 - R 100 -15.5 -4.08767 | opp_overlap 2479724 2479742, overlap 2479724 GGCATCTGCGCAAAA GGAAAGCCGGA TCGT CCCGGCTTTCC GTATCGGATCTACTC TERM 2088 2479739 - 2479724 - R 74 -8.2 -4.19735 | opp_overlap 2479724, overlap 2479719 CTGCGCAAAAGGAAA GCCGGA TCGT CCCGGC TTTCCGTATCGGATC Smed_2404 2480707 - 2479754 - | glyoxalase/bleomycin resistance protein/dioxygenase Smed_2405 2481643 - 2480867 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Smed_2406 2482444 - 2481644 - | binding-protein-dependent transport systems inner membrane component Smed_2407 2483295 - 2482441 - | binding-protein-dependent transport systems inner membrane component Smed_2408 2484329 - 2483292 - | spermidine/putrescine ABC transporter ATPase subunit TERM 2089 2484360 - 2484396 + r 78 -8.8 -4.11484 | gap 2 GGCCTCATACGCGGC TGTCACCG-GCCA-CGTC AGA GGCGCTGCCGCGGTGACA TTTTGAAAGATTCCA Smed_2409 2485583 - 2484504 - | extracellular solute-binding protein Smed_2410 2486815 - 2485757 - | putative agmatinase TERM 2090 2487309 - 2487274 - g 79 -14 -3.53091 | gap 1 ATGCCTTCGCCGAAA TCGCA-GCCGCGACAGC GGC GATGACGCGGCCTGCGA CCAGCGGCGAGCTTA TERM 2091 2487863 - 2487879 + G 73 -6.5 -4.26903 | opp_overlap 2487854 CAACGAGGTGCGCGC CGCGC CGATCGT GCGCG TTTTCATCGACTGGC Smed_2411 2487036 - 2488052 + | LysR family transcriptional regulator Smed_2412 2488111 - 2489289 + | hypothetical protein Smed_2413 2490226 - 2489381 - | hypothetical protein TERM 2092 2489532 - 2489522 - G 72 -2.4 -4.67982 | overlap 2489523 CGTCAGCGAAGAAAA GGCC GGC GGCA GAAAAGCGAGGGCGT TERM 2093 2489922 - 2489878 - G 70 -12.1 -3.1552 | gap 1, overlap 2489876 GGCCAGCCACGAAGA TGCCGCTGACGGCG-GAGCG AAACAG CGCCCACCCCGCCAGCGTCA GGAAGACCGGCGCCA TERM 2094 2490197 - 2490179 - G 80 -14.6 -3.16191 | opp_overlap 2490184 2490185 CGAGAGCCGCACGAA GATCGGCG ACC CGCCGATC GCCGCGCCGCCGAGA TERM 2095 2490392 - 2490378 - R 70 -4.2 -4.62069 | opp_overlap 2490360, overlap 2490380 CCGGTAGGCGAAAAA CGGC TACACGG GCCG TTTCTGCCGGCACCG Smed_2414 2492021 - 2490588 - | aldehyde dehydrogenase TERM 2096 2491878 - 2491929 + g 72 -7.3 -4.18018 | gap 3, opp_overlap 2491919 TTTCTTTGCAGCCGC GACGG-CGCGGTCGATATCG-ACGGC GGT GCCGAGCGAGAT-GACCGCGATCGGC TTTTCGGTCGCCGGG Smed_2415 2493827 - 2492517 - | FAD dependent oxidoreductase TERM 2097 2493490 - 2493470 - G 74 -12.5 -3.29829 | GATACCGCTCGACAA GCCGGCGGA TGA TCCGCCCGC CCTCCTGCACCAGAC Smed_2416 2495194 - 2493827 - | glutamine synthetase catalytic region Smed_2417 2495315 - 2496007 + | GntR family transcriptional regulator Smed_2418 2496184 - 2496900 + | GntR domain-containing protein Smed_2419 2496897 - 2498069 + | hypothetical protein Smed_2420 2498105 - 2499367 + | extracellular solute-binding protein TERM 2098 2499412 - 2499365 - f 72 -5.3 -4.44667 | gap 1, overlap 2499367 CTCGCGAACAAGAAA TAGCCTGGGC-ACCGGCGGCGG TTCAG CCGCCGCCGGCCGTCTCGCCTG ATGACAAGAAGGCAC Smed_2421 2499470 - 2500405 + | binding-protein-dependent transport systems inner membrane component Smed_2422 2500410 - 2501243 + | binding-protein-dependent transport systems inner membrane component TERM 2099 2502146 - 2502162 + G 70 -10.1 -3.62859 | overlap 2502153 2502154 CTTGCCACGGTTGAT CTGGTCG AGC CGACCGG TTTCGGCATTATCCT Smed_2423 2501249 - 2502313 + | ABC transporter related Smed_2424 2502491 - 2502889 + | cytochrome c class I TERM 2100 2503932 - 2503882 - g 100 -28.6 -3.67597 | GTTGCGACTGAACAA GGAACTGGAGCATTCACGCTTTTC GAA GAAGAGCGTGAATGCTCCAGCCCC ACGGCGACAGCGGTC Smed_2425 2503024 - 2503968 + | cytochrome c oxidase subunit II Smed_2426 2504004 - 2505782 + | cytochrome c oxidase subunit I type TERM 2101 2506323 - 2506376 + G 74 -10.1 -3.7795 | overlap 2506324 2506352 2506353 GTGTGACCGCACATG CCGCGCAAGCCCCGATCGACAGCAG AACG CGCCTGTCGATCGAGCTGTGCGCGA TTTACTGGCATTTCA TERM 2102 2506324 - 2506375 + G 74 -13.6 -2.86288 | overlap 2506323 2506352 2506353 TGTGACCGCACATGC CGCGCAAGCCCCGATCGACAGCAG AACG CGCCTGTCGATCGAGCTGTGCGCG ATTTACTGGCATTTC Smed_2427 2505779 - 2506477 + | cytochrome c oxidase subunit III Smed_2428 2506490 - 2507212 + | cytochrome c oxidase subunit III Smed_2429 2507225 - 2507581 + | hypothetical protein TERM 2103 2507616 - 2507586 - f 78 -3 -5.14563 | opp_overlap 2507609, overlap 2507588 GCGGCGAGTAAAAAA CGGCTGCCGAATGG TCG CGTTCCGGCGGCGG ATCCACCTGCCGCCT Smed_2430 2507844 - 2510405 + | FAD dependent oxidoreductase TERM 2104 2510460 - 2510489 + T 81 -10.9 -3.86822 | gap 1, overlap 2510448 CAGCGCCCTTTGGAG CGTTTCGGTG-TTC CTT GAAGCACTGAAACG TTTCTGCCAGCGTTA Smed_2431 2511483 - 2510557 - | hypothetical protein Smed_2432 2511623 - 2512513 + | LysR family transcriptional regulator TERM 2105 2512984 - 2512999 + G 72 -2.4 -4.68424 | CTGCCGCGCAGCCGA CGTCAC GAAG GGGGCG TTTTTCCATCACTTC Smed_2433 2512853 - 2513488 + | TetR family transcriptional regulator Smed_2434 2513485 - 2514021 + | hypothetical protein Smed_2435 2515506 - 2514061 - | amidohydrolase TERM 2106 2515590 - 2515624 + r 80 -14.8 -2.81133 | opp_overlap 2515585 2515593 AATCTATGAATGATG GAAGGGCCGGCGTCGG GGA TCGCCGCCGGCCCGGC TGTGATGGATCAATC TERM 2107 2515621 - 2515593 - R 100 -18.8 -3.14136 | opp_overlap 2515590, overlap 2515585 CTATGAATGATGGAA GGGCCGGCGTCG GGGAT CGCCGCCGGCCC GGCTGTGATGGATCA Smed_2436 2517178 - 2515634 - | extracellular solute-binding protein TERM 2108 2516063 - 2516081 + g 74 -10.2 -3.71487 | overlap 2516055 GACCGCAGCCGGGAA GCTCGGCA CGT TGCCGCGC TTATTGGCTATGATC TERM 2109 2516114 - 2516135 + g 76 -5.7 -4.59853 | overlap 2516117 GATCGGCTCGCCATT GTAGCCGGC ATCC GCCAGCTCC TTTTTGGCGGCTTCG Smed_2437 2518064 - 2517192 - | putative beta-lactamase precursor protein Smed_2438 2519691 - 2518066 - | ABC transporter related Smed_2439 2520506 - 2519688 - | binding-protein-dependent transport systems inner membrane component TERM 2110 2519898 - 2519883 - G 74 -9 -3.87815 | TCCGAGGCCGAGAAA GGAGAG CGCG CTCTCC GACAATATGGCCCAG Smed_2440 2521447 - 2520503 - | binding-protein-dependent transport systems inner membrane component Smed_2441 2522516 - 2521611 - | LysR family transcriptional regulator TERM 2111 2522713 - 2522740 + r 75 -10.6 -3.78953 | gap 1 CAGGCCCACGCCGGA GCGCGGTGCGG GCGGAAA CCGCACC-CGC TTTCCTCGTCCCGCT Smed_2442 2523805 - 2522756 - | monosaccharide-transporting ATPase TERM 2112 2523445 - 2523433 - G 71 -5.5 -4.26076 | CCACCCCGATGAAAA GCCCT ATG AGGAC GGCCACCGGCGGCGG TERM 2113 2523765 - 2523781 + g 74 -5 -4.64861 | overlap 2523759 2523758 CGCCCACCAGCCGCA CCGGCC TTGGT GTCCGG TTTCTTTTCCGCACG TERM 2114 2523817 - 2523863 + r 100 -24.8 -3.54459 | overlap 2523818 2523820 GCATTCCCACTCCCT GGATCACGATGATTTTAGGTCG GAT CGACCTGAAATCATCGTGATCG TTTCCAACAGGTTGG TERM 2115 2523818 - 2523862 + r 100 -28.3 -2.72461 | overlap 2523817 2523820 CATTCCCACTCCCTG GATCACGATGATTTTAGGTCG GAT CGACCTGAAATCATCGTGATC GTTTCCAACAGGTTG TERM 2116 2523820 - 2523860 + r 100 -25.1 -2.90615 | overlap 2523818 2523817 TTCCCACTCCCTGGA TCACGATGATTTTAGGTCG GAT CGACCTGAAATCATCGTGA TCGTTTCCAACAGGT TERM 2117 2524001 - 2524032 + r 81 -11 -3.91798 | gap 1, overlap 2524002 2524004 GAATTGCTCTAGCTC G-CATATCGCAGCAG GTT CTGCTGCGATATCTC TTTCCTTGGCAATTC TERM 2118 2524002 - 2524030 + r 88 -14.7 -3.54414 | overlap 2524001 2524004 AATTGCTCTAGCTCG CATATCGCAGCAG GTT CTGCTGCGATATC TCTTTCCTTGGCAAT TERM 2119 2524004 - 2524028 + r 93 -17.3 -3.34468 | overlap 2524002 2524001 TTGCTCTAGCTCGCA TATCGCAGCAG GTT CTGCTGCGATA TCTCTTTCCTTGGCA Smed_2443 2525478 - 2523994 - | ABC transporter related TERM 2120 2525103 - 2525079 - G 71 -5.5 -4.25104 | opp_overlap 2525093 2525094 CCGGGTCGATGAAAA CGCCGAGCGCT TCC AGCGCGTGTCG GGCATCCGCATGCGC TERM 2121 2525502 - 2525518 + r 72 -9.4 -3.6682 | ACTGCTGTTCGGAAC GGGCAC TGAAC GTGCCC TTTCAATCCCTGGAG Smed_2444 2526996 - 2525809 - | putative periplasmic binding protein TERM 2122 2526382 - 2526346 - G 75 -3.6 -4.83169 | gap 2, opp_overlap 2526348 2526349 2526353 2526354 2526364, overlap 2526347 2526348 AGCCGTGGAGAAAAA GCCGCCGGCAACGCCCTC GAT GATGGCGCCGCGGGC--C TTGATCTTTGCCTTG TERM 2123 2527375 - 2527407 + r 93 -17.7 -3.32844 | opp_overlap 2527369 2527395 CTCACGAGAGGTGCT GCCCTCGACCGCATT CGA AACGCGGACGAGGGC TTCTCGGCTACCAGC Smed_2445 2528188 - 2527415 - | short-chain dehydrogenase/reductase SDR Smed_2446 2529669 - 2528233 - | aldehyde dehydrogenase Smed_2447 2530693 - 2529698 - | alcohol dehydrogenase Smed_2448 2531493 - 2530702 - | short-chain dehydrogenase/reductase SDR TERM 2124 2530792 - 2530782 - G 76 -8.2 -4.19276 | overlap 2530783 AGGACAGATAAAGAA CGCC ACC GGCG ACTTCCGCCGGCTCT Smed_2449 2531998 - 2531471 - | cupin 2 domain-containing protein Smed_2450 2533672 - 2532008 - | glucose-methanol-choline oxidoreductase Smed_2451 2534763 - 2533669 - | ABC transporter related TERM 2125 2534067 - 2534045 - G 76 -8.4 -4.1822 | overlap 2534049 CGGCAGTCGAAGAAA TTGATCGGCG GCT CGCCGACGAA GCCGGCAACGAAGGC Smed_2452 2535876 - 2534767 - | ABC transporter related TERM 2126 2534869 - 2534826 - G 71 -9.5 -3.68738 | overlap 2534827 TCTGGAACAAATGAA TGGCGTCGCGCGGGAAGG-CG ATGG CGACCGTCTCGC-CGACGCCG AGGGGCGTCCCGGCC TERM 2127 2535603 - 2535589 - G 73 -11.4 -3.59979 | GGCCTTCAGCGGAAA GGCGAG GTT CTCGCC GACCGAAAGGTGGGA Smed_2453 2536118 - 2535876 - | hypothetical protein Smed_2454 2536983 - 2536123 - | binding-protein-dependent transport systems inner membrane component Smed_2455 2537935 - 2536994 - | binding-protein-dependent transport systems inner membrane component TERM 2128 2537954 - 2537973 + r 75 -10.6 -3.64703 | opp_overlap 2537954 2537953 2537951, overlap 2537955 ACTCCTCCAGAAGAT TGCGCGGG ACCG CCCGCGCC TTTCGGTCAAGCGCA TERM 2129 2537955 - 2537972 + r 80 -14.1 -2.78679 | opp_overlap 2537954 2537953 2537951, overlap 2537954 CTCCTCCAGAAGATT GCGCGGG ACCG CCCGCGC CTTTCGGTCAAGCGC Smed_2456 2539391 - 2538036 - | extracellular solute-binding protein Smed_2457 2540517 - 2539447 - | malate/L-lactate dehydrogenase TERM 2130 2539856 - 2539835 - G 90 -8.7 -4.8622 | gap 1, overlap 2539836 CCCTTGAAGGAAAAA TCCACGCCGC CGA GCGGCA-GGA GCGTCCTGCCCTCGA Smed_2458 2540642 - 2541349 + | GntR family transcriptional regulator Smed_2459 2541557 - 2542351 + | short-chain dehydrogenase/reductase SDR gldA 2542389 - 2543483 + | glycerol dehydrogenase Smed_2461 2543501 - 2544229 + | short-chain dehydrogenase/reductase SDR TERM 2131 2544874 - 2544849 - g 70 -7.5 -4.03234 | gap 1, opp_overlap 2544873, overlap 2544850 TGGGCCGGAGAGAAA GGCGACCGCGCC CGG GCCGCGATC-CC GACGCGGCGCTTCGC Smed_2462 2544231 - 2544995 + | short chain dehydrogenase Smed_2463 2545026 - 2545670 + | glucose-6-phosphate isomerase Smed_2464 2545667 - 2546320 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 2132 2546477 - 2546494 + G 71 -8.4 -3.95852 | TCCACGCCGATCCGT CGGCCT ACCGCG AGGCCG TTTCCTTCATCAAAT Smed_2465 2546317 - 2547270 + | hypothetical protein Smed_2466 2547275 - 2548207 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 2133 2548258 - 2548294 + G 75 -14.4 -2.80816 | gap 1, opp_overlap 2548252 TTTTCAGAACCGCTC GCCGAGCGGCTGAGGGC GGCA GCCCGCGG-CGTTCGGC TCTACTGGCTGGGGC Smed_2467 2548204 - 2549082 + | hypothetical protein TERM 2134 2549135 - 2549179 + F 88 -15.9 -3.14132 | opp_overlap 2549137 TCGCTTATTGGAACC GATCGCGATGATTTCAGGT CAGCGCC ACCTGAAACCAGCGCGATC TTCGTGAACCGGGGG TERM 2135 2549177 - 2549137 - f 81 -14.9 -2.53876 | opp_overlap 2549135 GCTTATTGGAACCGA TCGCGATGATTTCAGGT CAGCGCC ACCTGAAACCAGCGCGA TCTTCGTGAACCGGG TERM 2136 2549840 - 2549822 - g 84 -13.8 -3.68351 | overlap 2549795 2549823 TTGCGATCATTGAAA CCGCGCGC CGG GCGCGCGA AAGCGGCTGTCAGGT TERM 2137 2549839 - 2549823 - g 78 -15.1 -2.80796 | overlap 2549795 2549822 TGCGATCATTGAAAC CGCGCGC CGG GCGCGCG AAAGCGGCTGTCAGG Smed_2468 2549200 - 2550090 + | RpiR family transcriptional regulator Smed_2469 2550093 - 2550839 + | deoxyribose-phosphate aldolase TERM 2138 2551240 - 2551223 - g 71 -5.5 -4.34402 | opp_overlap 2551210 2551208, overlap 2551224 GCTGGTACAGGAAAA CCGGCAA CGGC TTTCCGG CCCCGCTTTACACGG Smed_2470 2550844 - 2552391 + | carbohydrate kinase FGGY Smed_2471 2552388 - 2553917 + | carbohydrate kinase FGGY TERM 2139 2554657 - 2554684 + G 71 -9 -3.78775 | opp_overlap 2554654, overlap 2554668 CCGCGGAATTCATTA CCGGCGCCGACC TGCC GGTCGATGGCGG TTTCGTGGTCGGCAG Smed_2472 2553948 - 2554706 + | short-chain dehydrogenase/reductase SDR TERM 2140 2554720 - 2554766 + T 100 -27.5 -3.78811 | opp_overlap 2554711 GAGACATCGGCTTTC GCGGAATGCGGGCGGAAACCC TACAC GGCTTTCTGCCCGCATTCCGC TTTGACTTAGATTGT Smed_2473 2555803 - 2554811 - | monosaccharide-transporting ATPase TERM 2141 2555312 - 2555288 - G 74 -10 -3.68023 | gap 1, overlap 2555284 2555301 2555302 AATGCCGAAAAGGAA GCCGCT-GCCG AAAT CGACGAGCGGC GCGCCGGGCGAACCC Smed_2474 2557341 - 2555800 - | ABC transporter related TERM 2142 2556188 - 2556202 + g 70 -12.8 -2.83271 | overlap 2556185 TCCGCCCCGAGTGAG GCGGCG ACC CGCCGC TCCTTGTCCACGTCG TERM 2143 2557257 - 2557234 - G 70 -12.4 -3.12351 | GGCCTTCAGATCGAA GTCCACGCCC TTCA GGGCTTGGAC GCCGGCATAATTCTT TERM 2144 2557314 - 2557347 + g 86 -16.1 -3.12351 | opp_overlap 2557321, overlap 2557318 CGGTCATTGGGGTTC CAGAGAATGCACCGG AAAA CCGGTGCATCCTTTG TTCGATGTGAGCGGA TERM 2145 2557318 - 2557343 + g 89 -13.3 -4.23213 | opp_overlap 2557321, overlap 2557314 CATTGGGGTTCCAGA GAATGCACCGG AAAA CCGGTGCATCC TTTGTTCGATGTGAG TERM 2146 2557340 - 2557321 - G 79 -13.6 -3.48276 | opp_overlap 2557318 2557314 TGGGGTTCCAGAGAA TGCACCGG AAAA CCGGTGCA TCCTTTGTTCGATGT Smed_2475 2558340 - 2557375 - | monosaccharide-transporting ATPase Smed_2476 2559181 - 2558462 - | short-chain dehydrogenase/reductase SDR Smed_2477 2559416 - 2560150 + | GntR family transcriptional regulator TERM 2147 2560159 - 2560199 + T 100 -25.1 -2.78384 | opp_overlap 2560162 CTATTGAGCGCCAGA TCACGATGTTTTCAGGTCG GCC TGACCTGAAAACATCGTGA TCTACTCCAAGGAGC TERM 2148 2560196 - 2560162 - T 100 -20.3 -2.62983 | opp_overlap 2560159 TTGAGCGCCAGATCA CGATGTTTTCAGGTC GGCCT GACCTGAAAACATCG TGATCTACTCCAAGG TERM 2149 2560224 - 2560251 + T 86 -14.8 -3.21416 | opp_overlap 2560213, overlap 2560227 AGGAGCCGAGGCGTG GGATGCGGGCGG AGAA CCGCCCGCACTC TTCCTCATCCCGCTC TERM 2150 2560227 - 2560248 + T 87 -17.3 -2.50016 | opp_overlap 2560213, overlap 2560224 AGCCGAGGCGTGGGA TGCGGGCGG AGAA CCGCCCGCA CTCTTCCTCATCCCG Smed_2478 2561712 - 2560279 - | carbohydrate kinase FGGY Smed_2479 2563736 - 2561742 - | transketolase TERM 2151 2563870 - 2563849 - R 100 -18.7 -4.78572 | opp_overlap 2563849 CTCCAATGAAGAAAA CCCGCGGCC GTGT GGCCGCGGG TTTCGAAGGGGTCGA TERM 2152 2563849 - 2563870 + r 100 -18.7 -3.53811 | opp_overlap 2563849 CTCCAATGAAGAAAA CCCGCGGCC GTGT GGCCGCGGG TTTCGAAGGGGTCGA Smed_2480 2564923 - 2563919 - | TRAP dicarboxylate transporter, DctP subunit Smed_2481 2566239 - 2564962 - | TRAP dicarboxylate transporter, DctM subunit TERM 2153 2565036 - 2565021 - G 71 -5.4 -4.51174 | gap 1, overlap 2565024 GGACCAGAAGGAAAA GCACCAG TAT CTGG-GC GACCAGGAATGGGGT TERM 2154 2565526 - 2565547 + g 76 -13.7 -3.14132 | opp_overlap 2565506 2565505 TACCACGGCGGCCTC GGTCGGCGT CACG ACGCCGGCC TTGATGCCGCCCAGG Smed_2482 2566772 - 2566239 - | tripartite ATP-independent periplasmic transporter DctQ Smed_2483 2567969 - 2566791 - | hypothetical protein TERM 2155 2567010 - 2567000 - G 73 -3.2 -4.71426 | opp_overlap 2567005 TCCCGAGGAAGAAAA CGAC CCC GTCA GGATACTGATGGTTG Smed_2484 2568849 - 2568133 - | GntR domain-containing protein Smed_2485 2570373 - 2568934 - | FAD linked oxidase domain-containing protein TERM 2156 2571135 - 2571146 + G 88 -7.2 -4.8667 | opp_overlap 2571135 2571134 GGCAAGCCCAACAAG GCCG CCTC CGGC TTTTTCTCCAATATC Smed_2486 2570565 - 2571548 + | NAD-dependent epimerase/dehydratase TERM 2157 2572343 - 2572387 + G 95 -18.5 -3.46659 | opp_overlap 2572339 2572336, overlap 2572344 GTACGGAAGGAGTTT GCCGCTTTCGTCGAGTCCGGC GGT GCCGGACGCGACCACAGCGGA TTGCTTCTGCATCTC TERM 2158 2572344 - 2572386 + G 100 -22 -2.67513 | opp_overlap 2572339 2572336, overlap 2572343 TACGGAAGGAGTTTG CCGCTTTCGTCGAGTCCGGC GGT GCCGGACGCGACCACAGCGG ATTGCTTCTGCATCT Smed_2487 2571560 - 2572426 + | 2-hydroxy-3-oxopropionate reductase Smed_2488 2572435 - 2574213 + | dihydroxy-acid dehydratase TERM 2159 2574421 - 2574431 + F 83 -5.4 -4.87893 | opp_overlap 2574412 2574419 2574421 AGAAACGCAAAGAGA TCCT CGC AGGA TTTTTGATTGAACTT Smed_2490 2574943 - 2575329 + | putative peptide synthetase protein Smed_2491 2575326 - 2576276 + | periplasmic binding protein TERM 2160 2576590 - 2576600 + G 76 -8.2 -4.17425 | opp_overlap 2576589, overlap 2576595 CTGCTTGGCATAAGC GCCG GGG CGGC TTTTGCGGTCGTTAT TERM 2161 2576874 - 2576897 + G 76 -8.8 -4.13767 | gap 1, opp_overlap 2576873 GACGGGAAAGGATAT GGCTGCCGTGG CAG CCGTGGC-GCC TTTTGCCCTGGCAGG Smed_2492 2576278 - 2577300 + | transport system permease protein Smed_2493 2577300 - 2578277 + | transport system permease protein Smed_2494 2578270 - 2579076 + | ABC transporter related TERM 2162 2579110 - 2579085 - T 100 -12.5 -4.53034 | opp_overlap 2579085 CCTATAGAACGAAAA CCCGCCGGGCT GAAA AACCTGGCGGG TTTGAAGAAGCCTGA TERM 2163 2579085 - 2579110 + T 81 -12.5 -3.53444 | opp_overlap 2579085 CCTATAGAACGAAAA CCCGCCGGGCT GAAA AACCTGGCGGG TTTGAAGAAGCCTGA Smed_2495 2581281 - 2579143 - | TonB-dependent receptor Smed_2496 2582433 - 2581432 - | siderophore-interacting protein TERM 2164 2583697 - 2583640 - H 100 -22.8 -3.49618 | gap 1, overlap 2583637 2583636 2583641 CGCTCAGACAATCAA CCCGCGACGGGATGCGGTGCTGCAGCC GGAAT GGCTCC-GCACCGCATCCCGTCGCTAC CGCCCGAATACAGCA TERM 2165 2583696 - 2583641 - H 100 -26.3 -2.69449 | gap 1, overlap 2583637 2583636 2583640 GCTCAGACAATCAAC CCGCGACGGGATGCGGTGCTGCAGCC GGAAT GGCTCC-GCACCGCATCCCGTCGCTA CCGCCCGAATACAGC TERM 2166 2583762 - 2583751 - H 70 -4.4 -4.46581 | CAAAACTGGATAAAA CTTG GGGG CAAG GTCAGAACGCTTCGG TERM 2167 2583837 - 2583822 - H 100 -11.8 -4.6902 | opp_overlap 2583822 TCAGAAGCGCAAAAA GCCCCC GTAT GGGGGC TTTTTTGCTTGGCGT TERM 2168 2583822 - 2583837 + H 100 -11.8 -5.27477 | opp_overlap 2583822 TCAGAAGCGCAAAAA GCCCCC GTAT GGGGGC TTTTTTGCTTGGCGT TERM 2169 2584176 - 2584156 - H 83 -14.1 -3.12668 | opp_overlap 2584156, overlap 2584148 CGGCAAAGCGCAAGA TTTGCTCCC GGC GGGAGCAAA TTTCAATCGAGAAGC TERM 2170 2584156 - 2584176 + H 95 -14.1 -3.64703 | opp_overlap 2584148 2584156 CGGCAAAGCGCAAGA TTTGCTCCC GGC GGGAGCAAA TTTCAATCGAGAAGC TERM 2171 2584196 - 2584210 + H 83 -5 -5.07652 | AATCGAGAAGCTGGT GAAGTT TTT GACTTC TTTTGTTTTGAACAC TERM 2172 2585456 - 2585469 + H 76 -4.5 -4.7254 | GTCGTCTTGCGACTT CGCAG AGCC CTGTG TTTTTGATAAACAGT TERM 2173 2585844 - 2585860 + H 71 -8 -4.08546 | overlap 2585839 2585838 TTGGTCTTTCGGCGA GAGGGT CTCTC ACCCTC TTTATCGTTACTCAT TERM 2174 2587398 - 2587376 - H 70 -4.1 -4.62783 | CAGCCAGCCCAAAAA CCCGGTTAC CTTTT ACAACCGAG CCAATCAGATGCCAT TERM 2175 2590297 - 2590282 - H 90 -3.2 -5.75342 | overlap 2590265 GTTCTTCAAAAAAAA TGACAG TTTT CTGACA AACCCCCGGAGAGCA TERM 2176 2590435 - 2590466 + H 78 -11.4 -3.76952 | opp_overlap 2590415, overlap 2590436 2590438 TGCTTCGTTTCGGAG CCGCGGCGTTGGGG CCCT CCCCTGCGCCGTGA TTTGACTTCCGTGCA TERM 2177 2590436 - 2590465 + H 83 -14.9 -2.8585 | opp_overlap 2590415, overlap 2590435 2590438 GCTTCGTTTCGGAGC CGCGGCGTTGGGG CCCT CCCCTGCGCCGTG ATTTGACTTCCGTGC TERM 2178 2590438 - 2590463 + H 77 -13.9 -2.97588 | opp_overlap 2590415, overlap 2590436 2590435 TTCGTTTCGGAGCCG CGGCGTTGGGG CCCT CCCCTGCGCCG TGATTTGACTTCCGT TERM 2179 2591553 - 2591535 - g 71 -8.9 -3.95584 | opp_overlap 2591535 2591537 GGGCGAGGAAGCAAA GATCGTC CGCGC GACGATC TATTCGAACAGCCGG TERM 2180 2591820 - 2591835 + G 75 -3.2 -4.91712 | CCAACTGAAGCCGGC GGATTC GCTC GAAGCC TTTTTCTCCGTTACC Smed_2498 2590558 - 2592498 + | peptidase M23B TERM 2181 2592557 - 2592534 - T 100 -15.2 -4.82901 | opp_overlap 2592535, overlap 2592535 GGGCTCGTACAAAAA TGGGCCGCCC TGCA GGGCGGCCCT CATGTCGAAATGCGC TERM 2182 2592556 - 2592535 - T 100 -18.7 -3.49419 | opp_overlap 2592535, overlap 2592534 GGCTCGTACAAAAAT GGGCCGCCC TGCA GGGCGGCCC TCATGTCGAAATGCG TERM 2183 2592535 - 2592556 + T 95 -18.7 -2.62983 | opp_overlap 2592534 2592535 GGCTCGTACAAAAAT GGGCCGCCC TGCA GGGCGGCCC TCATGTCGAAATGCG Smed_2499 2595182 - 2592576 - | ATPase TERM 2184 2592962 - 2592984 + g 70 -7.6 -4.08767 | CCTCCATGACCTGAT CGCGAACAGC ATC GCTGTCCTCG TTTTCACCGAGTGCG TERM 2185 2593396 - 2593377 - G 80 -5.6 -4.72007 | opp_overlap 2593388, overlap 2593378 2593381 GCCTAGGAAAATAAA CGAGCCGA TCGG CCGGTTCG GATCCTGTAGCCCTG TERM 2186 2595443 - 2595419 - R 100 -12.8 -4.42386 | CCTCGATGCAGAAAA GCCCAGCCGC TATTC GGGGCTGGGC TTCGAGAAGATCGAC Smed_2500 2596127 - 2595468 - | hypothetical protein Smed_2501 2597440 - 2596562 - | HemK family modification methylase prfA 2598529 - 2597447 - | peptide chain release factor 1 TERM 2187 2597616 - 2597665 + g 73 -12.8 -3.12351 | gap 1, opp_overlap 2597628 TTATAGGTGCGTATG CGCTCGGAACGATCGCCGGAGCC TACCT GGTTCCTGCGGTCGG-CCGAACG TTCGCTGTCGGCGCG TERM 2188 2598170 - 2598151 - G 71 -11.4 -3.45324 | opp_overlap 2598159, overlap 2598139 2598149 GATCGCCAGCAAAGA GGGCGGCT TCCG AGCCACCC GTCCCGGCGCGGATT Smed_2503 2600865 - 2598598 - | phosphoenolpyruvate-protein phosphotransferase PtsP Smed_2504 2602329 - 2601055 - | aspartate kinase Smed_2505 2602890 - 2604410 + | ABC transporter related Smed_2506 2604673 - 2605419 + | 3-demethylubiquinone-9 3-methyltransferase Smed_2507 2605860 - 2605432 - | hypothetical protein Smed_2508 2606714 - 2605857 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Smed_2509 2607072 - 2606815 - | glutaredoxin 3 Smed_2510 2607900 - 2607124 - | phosphoribosyltransferase TERM 2189 2607965 - 2607928 - H 73 -13 -2.78463 | ATCCGCGGCACTACA TGTTTGTCCTTTAGTC GAAGCG GATTAAAGGACAAACA TGCAGCAACTCAAGT TERM 2190 2608146 - 2608132 - g 71 -5.6 -4.25104 | overlap 2608133 CCGGCGTGACGAAAA GGCAGG CTT CCTGCT CGAGATCGTCGCACA TERM 2191 2608719 - 2608749 + G 76 -8.9 -4.24342 | opp_overlap 2608712 TGACCAACCCGCTCG CGTCGCGCAATCG CAAGC CGATGCCGCGGCG TTTCTTCCTGAGGGC Smed_2511 2608061 - 2608960 + | hypothetical protein Smed_2512 2609143 - 2608970 - | Flp/Fap pilin component TERM 2192 2609092 - 2609114 + g 75 -13.4 -3.01791 | CGAGGAGGCCGTATT CCACGACGGT AGC ACCGTCGCGG TCTTCAAACAGGCGT Smed_2513 2609557 - 2609237 - | hypothetical protein TERM 2193 2609663 - 2609638 - R 75 -5.4 -4.57073 | gap 1 CATCTGCTCGAAAAA CAGCGCA-GCC GAAGT GGCGTACGCCG GAACTGACACCATCA Smed_2514 2610377 - 2609970 - | NUDIX hydrolase Smed_2515 2611195 - 2610383 - | GCN5-related N-acetyltransferase argJ 2612518 - 2611277 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 2194 2611552 - 2611563 + g 70 -7.2 -4.07568 | overlap 2611550 AATTGGCATCCTCGC CGGC AACC GCCG TTTTGACGAGCGGCG TERM 2195 2612189 - 2612222 + g 76 -13.7 -3.16881 | CTCCGCCTCGCTGCA GCCGACCGCCCTGGC CGCG GCCTCGGCGGTCAGC TTGGTGGCCTCCCTG TERM 2196 2612589 - 2612562 - R 83 -13.5 -3.53761 | gap 1, opp_overlap 2612559 2612557 2612556 2612554 GAATGTTGCGCGAAA TGCCCGAACGGC GTTCA GCCGT-CGGGCA TCCTGGTCTTTTAAA Smed_2517 2613545 - 2612691 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2197 2613724 - 2613736 + H 72 -4.7 -4.56597 | overlap 2613716 2613722 TTTCCGGGCGTTTCG CGGCG TGA CGCGG TTTTTCGACCGCGCG TERM 2198 2615105 - 2615088 - g 71 -8.3 -3.93664 | overlap 2615089 ATCGAAGAGATCAAA TCCGCGC ATGA GCGCGGT CAACCGATGCTCGTC Smed_2518 2613792 - 2616503 + | preprotein translocase subunit SecA TERM 2199 2616609 - 2616579 - f 93 -12.7 -4.14627 | opp_overlap 2616578 TCTTCAGACAAATAA GCCGCAACAAC GCATTTCCT GTTGTTGCGGC GTCTGTCGATCCGAC Smed_2519 2616683 - 2617882 + | Bcr/CflA subfamily drug resistance transporter Smed_2520 2618009 - 2619433 + | polysaccharide biosynthesis protein TERM 2200 2620039 - 2620002 - g 73 -8.4 -4.09685 | gap 1, overlap 2620003 CGCGATCGGCGAAAA CCTGCCG-CTGACGGTG ACCGA CACCTTCAGGCGGCCGA TGCTCGAAAGCCTGC TERM 2201 2620272 - 2620231 - g 71 -11 -3.53444 | gap 2, opp_overlap 2620241, overlap 2620232 GCATCCGGTTGGAAA GGCCGCGAACGCAGTGCCAT GATC ATGG-ACCGCTTTCGCG-CC GCCTTCGCAAGAGAG Smed_2521 2619430 - 2620704 + | hypothetical protein Smed_2522 2622363 - 2620720 - | AMP-dependent synthetase and ligase TERM 2202 2623344 - 2623308 - H 83 -14.4 -3.05384 | overlap 2623291 CGGCGTTCGATTTAA CGGGCG-CCGGGGCGACG GGT CGCCGCCCAGGGCGC-CG AGAGGTGTGCATGGT TERM 2203 2623674 - 2623700 + G 71 -9.3 -3.75665 | TCTGGGAGGGCCCCT CGACCTGCGCC ACCAC GGCCCAGGGCG TTTCCTCCGATGTCG Smed_2523 2623349 - 2623873 + | hypothetical protein Smed_2524 2624541 - 2623891 - | HNH endonuclease Smed_2525 2625202 - 2624555 - | HhH-GPD family protein TERM 2204 2624642 - 2624614 - G 93 -8.1 -5.04987 | gap 1, overlap 2624603 AATAGGCCCAAAAAA GCCG-CGCGGCG ACGCTG CGCCACGGCGAC CATGCGGCAGCGAGC Smed_2526 2625257 - 2626150 + | glutamyl-Q tRNA(Asp) synthetase Smed_2527 2627040 - 2626168 - | putative ribonuclease BN Smed_2528 2627206 - 2628039 + | short chain dehydrogenase Smed_2529 2628062 - 2628265 + | hypothetical protein TERM 2205 2628804 - 2628826 + G 74 -9.8 -3.73509 | AGTCGTCAGCGCCGA GGCGGTTGCC TAT GTCAACCGTC TTTCAGATTTCCTGT Smed_2530 2628334 - 2628912 + | ATP--cobalamin adenosyltransferase TERM 2206 2629452 - 2629491 + G 71 -4.8 -4.46212 | overlap 2629454 CCGAAGCGCCGCTGA TTGGCGCCTCCGGCGC GATATCGG GCGTCGTGGCCGCCTA TTTTCTCCTGCACCC TERM 2207 2629576 - 2629594 + G 77 -4.5 -4.89233 | AGCCATTCCGCTCGC CTTCTGG ATCGG CCAGCAG TTTTTCATGTTGGTG Smed_2531 2629037 - 2629828 + | rhomboid family protein Smed_2532 2630141 - 2630890 + | electron transfer flavoprotein alpha/beta-subunit Smed_2533 2630914 - 2631843 + | electron transfer flavoprotein alpha subunit TERM 2208 2631934 - 2631896 - f 91 -17.4 -3.16564 | opp_overlap 2631902, overlap 2631899 CCGGCATGGCATTAA CAATCGTACCGGGCCGGC CCT GCCGGCCCGGTATTTTTG CATCTACTGCAGCAT TERM 2209 2631931 - 2631899 - f 88 -13.3 -3.7282 | opp_overlap 2631902, overlap 2631896 GCATGGCATTAACAA TCGTACCGGGCCGGC CCT GCCGGCCCGGTATTT TTGCATCTACTGCAG TERM 2210 2631902 - 2631928 + F 100 -23.8 -4.7173 | opp_overlap 2631899 2631896 TGGCATTAACAATCG TACCGGGCCGGC CCT GCCGGCCCGGTA TTTTTGCATCTACTG Smed_2534 2631987 - 2632859 + | 3-hydroxybutyryl-CoA dehydrogenase Smed_2535 2633571 - 2632897 - | redoxin domain-containing protein TERM 2211 2634018 - 2634008 - g 71 -8.2 -3.89501 | opp_overlap 2634008 2634014, overlap 2633998 GAAGAGCTTCAGAAA GCCG ATG CGGC ACTCACGGCTCTGAT Smed_2536 2633597 - 2635000 + | argininosuccinate lyase TERM 2212 2635361 - 2635344 - g 71 -4.7 -4.44797 | opp_overlap 2635352 CGATCAATACGAAAA CGCCCGC CGGT ACGGTCG CACCCAACGAGACTG Smed_2537 2635220 - 2635414 + | hypothetical protein Smed_2538 2635429 - 2636697 + | diaminopimelate decarboxylase TERM 2213 2638381 - 2638323 - g 74 -11.9 -3.53012 | gap 3 TTCCTGCTCCTGAAA TCGGCACGCA-CGCGCATGCAGCTCGCC CGGAAC GACGACATGC-TGCGCGATGC-TGCCGA CCACCTGTGGGAAAT TERM 2214 2638698 - 2638661 - g 76 -7.5 -4.24948 | opp_overlap 2638661 GGATCAGATCGAAAA TCTGGCCCGCTCGGGCG CTCG CGACCAGGCGCGGCAGA TGCTCTCCGAGTTAC Smed_2539 2636838 - 2639492 + | hypothetical protein TERM 2215 2639550 - 2639581 + T 89 -16 -3.2396 | GTGATCGGTATCAGG GAGTTCGTGCGG GCGGAAAA CCGCACGAACTC TTCCTCATCGTGCTT Smed_2540 2640065 - 2639706 - | response regulator receiver protein Smed_2541 2640825 - 2640280 - | hypoxanthine phosphoribosyltransferase Smed_2542 2641493 - 2641074 - | hypothetical protein TERM 2216 2641820 - 2641834 + H 77 -7.8 -4.27316 | overlap 2641821 AAATTCATCGTGATC TCGTGC CAT GCACGG TTTTGCCTTGGCAGG TERM 2217 2642215 - 2642233 + G 76 -5.8 -4.66264 | overlap 2642219 GAGTTTCCCATGCTG CGCCGCCG GGT CGGCATCG TTTTTCAGGATTTTC Smed_2543 2641960 - 2642643 + | cell division ATP-binding protein FtsE Smed_2544 2642636 - 2643655 + | hypothetical protein TERM 2218 2643833 - 2643843 + G 73 -6.8 -4.27441 | overlap 2643819 GTGCTGCGCAAACTC CTGC GCC GCAG TTTCTTCGTGCTGCT Smed_2545 2643761 - 2644459 + | hypothetical protein Smed_2546 2644593 - 2645372 + | phospholipid/glycerol acyltransferase Smed_2547 2645962 - 2645393 - | ChaC family protein TERM 2219 2646346 - 2646357 + G 76 -7.2 -4.36914 | GGACCAGATTCGAGA GCGG CTGA CCGC TTTTCTGACGGAAAG TERM 2220 2646894 - 2646875 - g 83 -7.8 -4.56775 | ACCGTCGCGGAAAAA GCCGAGTG GCTT CAGTCGGC CCACGTAGCACCGCA Smed_2548 2646218 - 2647231 + | hypothetical protein Smed_2549 2648245 - 2647319 - | cyclohexadienyl dehydrogenase TERM 2221 2647629 - 2647647 + g 80 -14.6 -3.21924 | overlap 2647627 GTCACCGTCTCGAGG TCGTCGGC GGT GCCGACGA TATTGTAAGCGATGA Smed_2550 2649348 - 2648242 - | histidinol-phosphate aminotransferase TERM 2222 2648392 - 2648409 + g 74 -12.7 -3.28924 | opp_overlap 2648384 2648403 ATAGGAATCCGCATC GCCGGCA GACA TGCCGGC TTCTGCCGGAAAATG Smed_2551 2650206 - 2649454 - | methyltransferase type 11 Smed_2552 2650305 - 2651075 + | hydroxyacylglutathione hydrolase Smed_2553 2651075 - 2651539 + | hypothetical protein Smed_2554 2652493 - 2651603 - | hypothetical protein Smed_2555 2653406 - 2652630 - | putative signal peptide protein TERM 2223 2653523 - 2653558 + H 77 -10.5 -3.85698 | gap 1, opp_overlap 2653514 2653532 ACGATAGCGTATTTA TGCCGCAAAC-ACCTG AGATG CGGGCGGTTTGCGGCA TTTCTGCGCCCGCCG rpmB 2653835 - 2654125 + | 50S ribosomal protein L28 TERM 2224 2654166 - 2654182 + F 100 -10.1 -4.95758 | opp_overlap 2654158 2654156 ATGAAGAGGCTTGCG GGTTCGC CCG GCGAGCC TTTTTCTCGTGTCGT Smed_2557 2654261 - 2654899 + | hypothetical protein Smed_2558 2655938 - 2654946 - | putative signal peptide protein TERM 2225 2655383 - 2655367 - G 71 -10.8 -3.53012 | opp_overlap 2655353 2655358 GCGGCGCCGCGCAAA GCGCCG TCCTT CGGCGC TATCGCAATGGTCTC TERM 2226 2656032 - 2656061 + r 70 -12.2 -2.82516 | gap 2, opp_overlap 2656025, overlap 2656034 TTGATTAACCGGCTC G-ACGCGCC-CCGC CCGG GCGGCGGCGCGTAC TCTCGTCCTCGAAGA TERM 2227 2656034 - 2656058 + r 81 -15 -2.67515 | gap 1, opp_overlap 2656025, overlap 2656032 GATTAACCGGCTCGA CGCGCC-CCGC CCGG GCGGCGGCGCG TACTCTCGTCCTCGA Smed_2559 2657916 - 2656021 - | cobalt chelatase, pCobT subunit TERM 2228 2656495 - 2656515 + g 79 -11.1 -3.86015 | overlap 2656496 GCGGCCCGGCGACTG GGGCTTGCC GCC GGCAAGCCA TTTCTCGCGCGACTG TERM 2229 2656496 - 2656514 + g 77 -14.6 -2.91395 | overlap 2656495 CGGCCCGGCGACTGG GGCTTGCC GCC GGCAAGCC ATTTCTCGCGCGACT TERM 2230 2658017 - 2658000 - R 70 -2.7 -4.72201 | overlap 2658002 CTGCATAAAAAACAA TCCCT CCCGCTCC AGGGA AGCAGTCCGGCTTCT Smed_2560 2659051 - 2658056 - | cobalt chelatase, pCobS small subunit TERM 2231 2659022 - 2658991 - G 72 -7.3 -4.11216 | gap 1 TGTCGATGCCGAAAA CCTCCCGGAC-CGA GACGG TCGTGTCGGGAAGG TTGGAAATGTCGAGG Smed_2561 2659762 - 2659127 - | heat shock protein DnaJ domain-containing protein Smed_2562 2659903 - 2660184 + | BolA family protein Smed_2563 2661510 - 2660206 - | hypothetical protein TERM 2232 2661442 - 2661430 - G 90 -2.6 -5.47399 | CGAACCGGAAAAAAA CGCC GAAAT GACG AGAAGGCAGATAACG aroB 2662649 - 2661507 - | 3-dehydroquinate synthase TERM 2233 2662662 - 2662699 + r 78 -3.3 -5.0538 | gap 1, overlap 2662665 CATGCTTTCTGGTGA TCGGCGATGG-CGGCGAG AAC CTCCTCGACCATCGCTTC TTTTTTCACATCGCG TERM 2234 2662665 - 2662696 + r 93 -11.6 -4.63089 | gap 1, overlap 2662662 GCTTTCTGGTGATCG GCGATGG-CGGCGAG AAC CTCCTCGACCATCGC TTCTTTTTTCACATC Smed_2565 2663224 - 2662646 - | shikimate kinase Smed_2566 2663552 - 2663701 + | putative signal peptide protein TERM 2235 2664041 - 2664018 - g 81 -3.8 -5.06414 | gap 1 CGCGCCGAAGAAAAA CCGCGCG-CTT CCC AAGACGCTCAG CATCGAAGACGTCAC xerD 2663698 - 2664639 + | site-specific tyrosine recombinase XerD Smed_2568 2664703 - 2665656 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 2236 2665754 - 2665774 + F 76 -12.7 -3.17212 | opp_overlap 2665742, overlap 2665747 CAACCGGATTTGGAC TATGGCCAA ATC TTGGCCATA TTCATGCGGTCATGA TERM 2237 2667246 - 2667220 - g 73 -10.8 -3.65812 | GCCGGCGCAAGACAA GCCGCAGGTG GCCGCTG CTCCTGCGGC GAATGCGCAGGCGCA Smed_2569 2665898 - 2667343 + | hypothetical protein Smed_2570 2667343 - 2667579 + | SirA family protein Smed_2571 2668797 - 2667649 - | cobalamin synthesis protein P47K Smed_2572 2669940 - 2668810 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 2238 2670065 - 2670046 - H 81 -15 -2.52464 | overlap 2670057 GGCCGCGTCAATCCA CCGCCGGA ACAC TCCGGCGG CGAGACCTCAGCCGG Smed_2573 2670146 - 2671309 + | amidohydrolase Smed_2574 2671333 - 2671797 + | AsnC family transcriptional regulator TERM 2239 2671818 - 2671773 - T 100 -22.7 -3.91541 | gap 1, overlap 2671776 GGAGGAAATCAAGAA TGACGGGCCGCTGCCGTTG-CT TTG AGACAACGGCAGCGGCCCTGCA AATCAGGCCTTGAGC TERM 2240 2671815 - 2671776 - T 100 -23 -3.01134 | gap 1, overlap 2671773 GGAAATCAAGAATGA CGGGCCGCTGCCGTTG-CT TTG AGACAACGGCAGCGGCCCT GCAAATCAGGCCTTG Smed_2575 2672864 - 2671821 - | alcohol dehydrogenase Smed_2576 2673083 - 2674024 + | AraC-like transcriptional regulator Smed_2577 2674574 - 2674077 - | AsnC family transcriptional regulator TERM 2241 2674139 - 2674161 + g 81 -16.4 -2.71681 | overlap 2674126 CCTCGACATTGTCGA GTTGCGCAAC CTC GTTGCGCAAC TCGTTGAGCGCATTG TERM 2242 2674277 - 2674251 - G 71 -5.7 -4.2828 | overlap 2674252 2674271 CCTGACCGAGGAAAA CCCGGCGAGCC GGTCA AGCACGCCAAG CGAAGGCGTCCGCTG TERM 2243 2674580 - 2674564 - G 93 -7.9 -5.02323 | overlap 2674565 TTATTACAAACAAAA TGCCGGT GCA ACCGGCG AAATGACTGGTGCAC TERM 2244 2674579 - 2674565 - G 73 -11.4 -3.60309 | overlap 2674564 TATTACAAACAAAAT GCCGGT GCA ACCGGC GAAATGACTGGTGCA TERM 2245 2675036 - 2675014 - g 81 -13.4 -3.57144 | TTGCCCAGTCCGAAA GGACCGACGC GGC GCTTCGGTCC CTCGGCCACATGCTC TERM 2246 2676239 - 2676224 - g 76 -7.5 -4.25104 | CGCTCCGGAGGAAAA CGGCG GCTGGG CGCCG CATCTGCATCTGCAG TERM 2247 2676984 - 2677004 + G 78 -5.4 -4.72272 | gap 2 ATCGCGGCCATGCGT GCCAGAGGCG AAG CGCC-C-GGC TTTTTCCTCGCCGAG Smed_2578 2674641 - 2677697 + | hypothetical protein Smed_2579 2677799 - 2678809 + | extracellular solute-binding protein Smed_2580 2681798 - 2678871 - | hypothetical protein Smed_2581 2682574 - 2681831 - | GntR family transcriptional regulator TERM 2248 2682608 - 2682628 + H 70 -4.7 -4.43877 | opp_overlap 2682616 CCGCCCGCCGGGGCC GGAAATCAG GAA TTGTTTTCC TTTATTTCCAACTTG Smed_2582 2682701 - 2684074 + | N-formimino-L-glutamate deiminase Smed_2583 2684111 - 2685145 + | substrate-binding region of ABC-type glycine betaine transport system Smed_2584 2685277 - 2686134 + | binding-protein-dependent transport systems inner membrane component Smed_2585 2686127 - 2686954 + | ABC transporter related Smed_2586 2686947 - 2688461 + | histidine ammonia-lyase Smed_2587 2688482 - 2689807 + | nucleoside recognition domain-containing protein TERM 2249 2689979 - 2690023 + G 75 -12.2 -3.64703 | TCTCAACCTTCCCCG GCGTCG-ATCGCACGCTCTCGA TCC TCGAGGGCG-GCGGGATGACGC TTTCGATCGAAGGCC TERM 2250 2690350 - 2690360 + G 71 -5.4 -4.4648 | CTCACGGCCGACATC GCTT CGG AAGC TTTTCTGATAGAGAT Smed_2588 2689795 - 2690388 + | hypothetical protein Smed_2589 2690624 - 2690391 - | hypothetical protein TERM 2251 2690489 - 2690473 - G 71 -5.7 -4.37092 | opp_overlap 2690483 2690486, overlap 2690474 ATGGGGCTCAGAAAA CGCAGTC CCT GCCCGCG TGGCTCGAGCGTTTG Smed_2590 2690935 - 2690747 - | hypothetical protein Smed_2591 2691164 - 2691364 + | putative signal peptide protein Smed_2592 2691645 - 2691445 - | hypothetical protein Smed_2593 2691860 - 2691627 - | hypothetical protein TERM 2252 2691716 - 2691733 + g 86 -8.4 -4.56775 | GCCGCCCATAGGCCG CCGCCT CGGCCA AGGCGG TTTTTGAGGGAGGGT TERM 2253 2691918 - 2691883 - R 73 -11.8 -3.07816 | gap 1, overlap 2691886 TCCTGACCGATCTAA CAAGGCCGGCGCCCGGA AGT TCCGC-CGCCTGCCTCG TCCATCCAACGGTAT TERM 2254 2691915 - 2691886 - R 72 -9.9 -3.68569 | gap 1, overlap 2691883 TGACCGATCTAACAA GGCCGGCGCCCGGA AGT TCCGC-CGCCTGCC TCGTCCATCCAACGG TERM 2255 2691995 - 2692034 + r 87 -15.6 -3.47078 | opp_overlap 2691993 AACGGCAACGGAACG GCTTAGGCGCCGTGCATC GACA GACGCGCGGCGCCGCAGC TTATACTATCAGATG Smed_2594 2692380 - 2692054 - | putative signal peptide protein TERM 2256 2692487 - 2692510 + r 71 -11.1 -3.30771 | opp_overlap 2692491 TGCAGGCGTGCCGAA TTGATCGGC CAACCC GCCGATCAA TTCTGCACGCTGTAG Smed_2595 2693081 - 2692638 - | endoribonuclease L-PSP TERM 2257 2692832 - 2692857 + g 83 -6.7 -4.84359 | opp_overlap 2692800, overlap 2692833 GCTCCGGCCGTGCGC CCAGCGCATCG AGGG CGGTGCGCAGA TTTTTGTAGGACTGC TERM 2258 2693243 - 2693202 - H 71 -13.2 -2.62184 | opp_overlap 2693202 2693223, overlap 2693223 CCCCTCGCCATACGA CTCGTACGCCGTACGA ATAAATTGCA TCGTACAACGTACGAG TCAATTGGTCAGGAT Smed_2596 2693314 - 2694087 + | TetR family transcriptional regulator Smed_2597 2694994 - 2694095 - | beta-lactamase-like protein Smed_2598 2695575 - 2695030 - | isochorismatase hydrolase Smed_2599 2695628 - 2696659 + | AraC family transcriptional regulator trmU 2698955 - 2697759 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2259 2698062 - 2698091 + g 71 -8.5 -3.90744 | gap 1, opp_overlap 2698058 AAGCCAATTGACGTC GCGCAGGTAGACGC GGC GGGTCT-CCAGCGC TTCTTTCGGGCCGAC TERM 2260 2698912 - 2698885 - G 74 -10.5 -3.70853 | opp_overlap 2698907, overlap 2698866 GCAACGACGGAAGAA TCGACGCCGCC GGACAT GGCGACGACGA CGCGCGTATCTTCGG TERM 2261 2699050 - 2699072 + r 74 -11.3 -3.51034 | overlap 2699049 GCGGCGCCCGCTCCT CCTGGAGGG CCCAC CCCTTCAGG TATTTCATGTGCATG Smed_2601 2699972 - 2699229 - | regulatory protein LuxR TERM 2262 2699620 - 2699636 + g 71 -10.8 -3.53224 | opp_overlap 2699617 GGAAGCAGAATAGCC GGCGCC TTTCC GGCGCC TTTGCGCGCAGGCTC TERM 2263 2699932 - 2699954 + g 71 -11.2 -3.46482 | overlap 2699933 AAAAGCATGTCCGTT TCGCCCTCGC GCC GCGAGGCCGG TTCGTTCGTTACCTT Smed_2602 2700351 - 2700626 + | hypothetical protein TERM 2264 2700649 - 2700688 + F 100 -19.4 -3.7795 | gap 1, overlap 2700653 TCCAGGGCCATAGTT CG-AACCGGCGGATCGGGA ACC TCCTGAGCCGCCGGTTTCG TTTCATCCGATTTCA TERM 2265 2700653 - 2700683 + F 100 -19 -4.10552 | overlap 2700649 GGGCCATAGTTCGAA CCGGCGGATCGGGA ACC TCCTGAGCCGCCGG TTTCGTTTCATCCGA Smed_2603 2700827 - 2701108 + | hypothetical protein TERM 2266 2701156 - 2701213 + T 100 -36.5 -4.36914 | opp_overlap 2701158, overlap 2701158 CCTGAAAGAACAGAA AAGCCACCGCGACGGCACTGCGCGTCT CATC GGACGCGCAGTGCCGTCGCTGTGGCTG TTTTGTCAGGCGCGC TERM 2267 2701211 - 2701158 - T 100 -38.4 -4.84673 | opp_overlap 2701156 2701158 TGAAAGAACAGAAAA GCCACCGCGACGGCACTGCGCGTC TCATCG GACGCGCAGTGCCGTCGCTGTGGC TGTTTTGTCAGGCGC TERM 2268 2701158 - 2701211 + T 100 -39.1 -3.79419 | opp_overlap 2701158, overlap 2701156 TGAAAGAACAGAAAA GCCACCGCGACGGCACTGCGCGTCT CATC GGACGCGCAGTGCCGTCGCTGTGGC TGTTTTGTCAGGCGC Smed_2604 2701569 - 2701219 - | hypothetical protein TERM 2269 2701459 - 2701440 - G 78 -6.4 -4.56597 | opp_overlap 2701440 2701441 2701443, overlap 2701441 TCTTCTCCTCAAAAA CGATCTGG TTTT CCAGATCC TTGGTCATGCGCTCG Smed_2605 2702115 - 2702816 + | two component transcriptional regulator TERM 2270 2702898 - 2702881 - f 79 -12.7 -3.17723 | opp_overlap 2702881 CCAGCCGCAACCGAA CCCGCCT CGAC AGGCGGG TTTTTTTTGTTGCCT TERM 2271 2702881 - 2702898 + F 100 -12.7 -6.11243 | opp_overlap 2702881 CCAGCCGCAACCGAA CCCGCCT CGAC AGGCGGG TTTTTTTTGTTGCCT TERM 2272 2703179 - 2703169 - g 73 -8.2 -4.07687 | ATGGTGGGTCGAAAA CGCC ACG GGCG AATTGGTCGGCCCGG Smed_2606 2703008 - 2703307 + | hypothetical protein Smed_2607 2703715 - 2703353 - | response regulator receiver protein TERM 2273 2703802 - 2703791 - R 72 -5.8 -4.42062 | GATTTGGCAAAGAAA CCGT TACC ACGG TGAGGCCTGCAGCGC Smed_2608 2704588 - 2703926 - | hypothetical protein Smed_2609 2704955 - 2705554 + | hypothetical protein Smed_2610 2705707 - 2706789 + | hypothetical protein Smed_2611 2707684 - 2706857 - | tRNA/rRNA methyltransferase (SpoU) Smed_2612 2708072 - 2707689 - | hypothetical protein Smed_2613 2708116 - 2709147 + | RluA family pseudouridine synthase Smed_2614 2709345 - 2710250 + | RNA polymerase factor sigma-32 TERM 2274 2710277 - 2710312 + T 100 -26.4 -3.62096 | opp_overlap 2710277 2710283, overlap 2710283 CATTTGCACACCAAA CGAAAATCCCGGCTGG AGCC CCAGCCGGGATTTTCG TTTCAGCTCATGCGG TERM 2275 2710312 - 2710277 - T 100 -26.4 -3.83502 | opp_overlap 2710277 2710283, overlap 2710283 CATTTGCACACCAAA CGAAAATCCCGGCTGG AGCC CCAGCCGGGATTTTCG TTTCAGCTCATGCGG TERM 2276 2710283 - 2710306 + T 100 -18.2 -4.55798 | opp_overlap 2710277 2710283, overlap 2710277 CACACCAAACGAAAA TCCCGGCTGG AGCC CCAGCCGGGA TTTTCGTTTCAGCTC TERM 2277 2710306 - 2710283 - T 100 -18.2 -4.6038 | opp_overlap 2710283 2710277, overlap 2710277 CACACCAAACGAAAA TCCCGGCTGG AGCC CCAGCCGGGA TTTTCGTTTCAGCTC Smed_2615 2712635 - 2710335 - | hypothetical protein TERM 2278 2711351 - 2711310 - G 71 -13 -3.01712 | gap 1, opp_overlap 2711348, overlap 2711336 2711339 CCTGTTCTCCCAATA GGCGTAACCGCCG-GCGCC GAGCA GAAGCACGACGGCTACGCC GATCGACAGGCGCTT Smed_2616 2713997 - 2712699 - | adenylosuccinate synthetase TERM 2279 2713157 - 2713128 - G 72 -7.7 -4.24342 | overlap 2713108 2713129 GCGCTCACCAAGAAA GCGGCCGACCTCG TCGT CGAGCTCGGTCGG GAACGGCCCTTCACC Smed_2617 2714117 - 2715094 + | hypothetical protein TERM 2280 2715134 - 2715097 - T 88 -16.5 -2.90075 | gap 1, opp_overlap 2715100 GCCTCCGCAATGATA TGACTCCACCCCTCCC CACAAGT GGGAGG-GTGGAGTCA ATTGAAGCCCGGGTG Smed_2618 2716749 - 2715154 - | D-3-phosphoglycerate dehydrogenase TERM 2281 2715638 - 2715651 + g 71 -8.1 -3.95022 | AGACCTGCGAGAGCC GCGCT CGTC AGCGC TTTCGTGTTCATCGC TERM 2282 2716835 - 2716856 + r 73 -10.9 -3.39505 | gap 1, opp_overlap 2716829 CGCATAGGATCAGGC GGCGAC-CTG CGA CAGCGTCGCC TTCTGGGTCTCGAAT Smed_2619 2718007 - 2716829 - | phosphoserine aminotransferase Smed_2620 2718942 - 2718145 - | putative heat resistant agglutinin 1 signal peptide protein TERM 2283 2718805 - 2718819 + g 81 -12.8 -3.79113 | opp_overlap 2718804 GCCACGCAGATACAG GCCGCC ACC GGCGGC TTCTTCTGACGAGAT Smed_2621 2719961 - 2719134 - | porin opacity type TERM 2284 2719217 - 2719200 - G 70 -10.5 -3.54488 | overlap 2719170 2719198 GTTGCCGAAAGAATA GCGCAGG CCGG CCCGCGC CTCGTGAACATAGAT Smed_2622 2721558 - 2720203 - | phosphoglucosamine mutase TERM 2285 2721970 - 2721943 - R 100 -20.6 -5.01732 | opp_overlap 2721943 AAGTGCTTTAAAAAA TGCCGCCGCCCC TTTC GGAGCGGCGGCA TCTGATCTGAACATG TERM 2286 2721943 - 2721970 + r 100 -18.4 -2.85668 | opp_overlap 2721943 AAGTGCTTTAAAAAA TGCCGCCGCCCC TTTC GGAGCGGCGGCA TCTGATCTGAACATG Smed_2623 2723931 - 2721994 - | ATP-dependent metalloprotease FtsH Smed_2624 2725392 - 2724031 - | tRNA(Ile)-lysidine synthetase Smed_2625 2726441 - 2725404 - | Tol-Pal system YbgF TERM 2287 2726042 - 2726085 + g 83 -12.4 -4.06903 | gap 1, overlap 2726045 CGGCCGGAGCACTGG GGCTCGGGCTATCCGTCACCC CGG GGGTGACGGAC-GCCTGATCA TTTGATTTCGGCGTT TERM 2288 2726045 - 2726082 + g 88 -17.1 -3.0693 | gap 1, overlap 2726042 CCGGAGCACTGGGGC TCGGGCTATCCGTCACCC CGG GGGTGACGGAC-GCCTGA TCATTTGATTTCGGC TERM 2289 2726096 - 2726113 + g 74 -4.7 -4.63218 | overlap 2726094 GATCATTTGATTTCG GCGTTGC AAGT GCGCCGC TTTTCTTGGAAGACG TERM 2290 2726605 - 2726585 - R 100 -12.5 -5.04249 | GTGGTAAAAAACAAA GGGCGGCCC TTG AGACCGCCC TCGAATTCCCCCTCG Smed_2626 2727163 - 2726633 - | peptidoglycan-associated lipoprotein TERM 2291 2727383 - 2727360 - R 100 -16.8 -3.75024 | opp_overlap 2727357 2727360 TGCGATCACGAAGAA TTTCGGGCCG AAAT CGGCCCGAAA TAATTGAATCTCATG TERM 2292 2727360 - 2727383 + r 87 -16.8 -2.77658 | opp_overlap 2727360, overlap 2727357 TGCGATCACGAAGAA TTTCGGGCCG AAAT CGGCCCGAAA TAATTGAATCTCATG tolB 2728843 - 2727533 - | translocation protein TolB TERM 2293 2728291 - 2728304 + g 72 -3.7 -4.57341 | overlap 2728282 2728292 CCATGATGGCCAGCT GGCGC TGGC GCGCA TTTTTCGGACCACTT TERM 2294 2728460 - 2728507 + g 79 -8.2 -4.30995 | CAGCATCTGCGTTCC GGCGAAGGTATCCCAGAGGCGG AACT CCGCCTTCAGCCTGCCGTCGCC TTCTTTTGTGACGCG Smed_2628 2729977 - 2728907 - | putative signal peptide protein TERM 2295 2729734 - 2729750 + g 76 -9.4 -4.07885 | overlap 2729720 GGTCGACGTCGTTCT CGCCGA CATTC TCGGCG TTTTCGACCGGCGTC Smed_2629 2730435 - 2729986 - | biopolymer transport TolR Smed_2630 2731182 - 2730463 - | Tol-Pal system TolQ TERM 2296 2731239 - 2731208 - H 73 -10.9 -3.46068 | gap 1, overlap 2731206 CCCCGAATCCAAACA CCCGG-CAGGAGCA ACTTA TGCTCGTGACCGGG TCGCCCAAATGTCCT TERM 2297 2732234 - 2732205 - g 72 -4.1 -4.65916 | overlap 2732206 GGCACTCGAACAAAA GCACGGCGGCC AATCTCAG GGCCGGCGCGG TCGCTGAAGACGGCA TERM 2298 2732685 - 2732665 - g 74 -6.1 -4.42238 | GGAGCGCAAGGAAAA GCTCGAAGC GCT GCTCCAAAC GCTGGGCACGACCTC TERM 2299 2733007 - 2732989 - g 73 -3.1 -4.72272 | gap 1 CGGTTTCAGCAAAAA GACGATGG AGGA CC-TCGCC GCAGCCTTCGCCTCA TERM 2300 2733313 - 2733265 - g 78 -10.1 -4.00476 | opp_overlap 2733261 2733265, overlap 2733266 2733291 TAAATCCACCACAAA GGCGCGCAGGACATCGGCCGCAC AAG GTGACGCCGACGTCCTCGGCATC CGTATTTCGCATCCG Smed_2631 2731583 - 2734180 + | DNA ligase D Smed_2632 2734741 - 2734298 - | Pol-Pal system-associated acyl-CoA thioesterase Smed_2633 2734869 - 2736089 + | NAD-dependent epimerase/dehydratase TERM 2301 2736109 - 2736127 + G 83 -16 -2.8655 | CGTGTTCGCCAGTCC GGAGGGGC TTA GCCCCTCC TCTCCTGTGGCTGCA Smed_2634 2736086 - 2736964 + | glycosyl transferase family protein TERM 2302 2737284 - 2737318 + G 89 -11.2 -4.34402 | overlap 2737288 CTCGGTCCGCCTCTT CGAGGAGGCGCGCACC GCC GGCGTGCGCCGCTGCG TTTTCCTGTCGAGCC Smed_2635 2736961 - 2737866 + | NAD-dependent epimerase/dehydratase Smed_2636 2738797 - 2737895 - | metallophosphoesterase ruvB 2739839 - 2738799 - | Holliday junction DNA helicase B TERM 2303 2738902 - 2738891 - G 70 -7.2 -4.07885 | CATTCGCCGTCAAAA CCCG GCCG CGGG GGGTGCGCTGGATGA ruvA 2740631 - 2740014 - | Holliday junction DNA helicase motor protein TERM 2304 2740061 - 2740077 + g 78 -6.5 -4.56775 | TCAGCCTGGCGCTGT CGGCG CCCTCCC CGCCG TTTTTCAGCGCGGCT ruvC 2741194 - 2740691 - | Holliday junction resolvase TERM 2305 2741275 - 2741261 - RH 86 -2.8 -5.62288 | TGAACAAAACAAAAA CATTAC ACA GAAATG GCTTCTCGCTGACCA Smed_2641 2743099 - 2742353 - | hypothetical protein Smed_2640 2741373 - 2742404 + | luciferase family protein Smed_2642 2744081 - 2743248 - | hypothetical protein Smed_2643 2747429 - 2744253 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 2306 2745524 - 2745508 - G 75 -12.3 -3.5936 | TCGAAACTGTTGAAA GGCGTGA AAA TCACGCC GGAATTGGAGGCATT Smed_2644 2748583 - 2747426 - | RND family efflux transporter MFP subunit TERM 2307 2748564 - 2748547 - G 85 -10.5 -4.36931 | overlap 2748539 2748548 GAAGGGAGACGAAAA CGCCGGC GACG GCCGGCA AACGCCACTTTCGCA TERM 2308 2748563 - 2748548 - G 70 -11.8 -3.21436 | overlap 2748539 2748547 AAGGGAGACGAAAAC GCCGGC GACG GCCGGC AAACGCCACTTTCGC TERM 2309 2748888 - 2748878 - R 74 -2.4 -5.02074 | overlap 2748883 TCACCCTTGAAAAAA GACG AGT CGGC AGAGACCGCTAACGG Smed_2645 2749763 - 2748939 - | metallophosphoesterase Smed_2646 2750452 - 2749871 - | 5-formyltetrahydrofolate cyclo-ligase TERM 2310 2750401 - 2750417 + g 74 -9.4 -3.93695 | CCGGCATCGCATCGC GGAGCG CCAGA CGCTCC TTTCTCAATGCTGCC Smed_2647 2750954 - 2751934 + | LysR family transcriptional regulator Smed_2648 2752503 - 2752126 - | hypothetical protein Smed_2649 2752785 - 2752516 - | hypothetical protein TERM 2311 2752836 - 2752869 + H 80 -2.2 -5.26119 | CTGCCCCTCGATCCC GGGCCGAATCGCAG AGCTTC CATCACTTCGGCCC TTTTCTTTTTAAACC TERM 2312 2752967 - 2753019 + H 75 -10.3 -3.72576 | opp_overlap 2752963, overlap 2752964 CTCGGGCAAACGGGC TCCTGCAGCATGGCCGCGGTGCCTC TTA GAGGCACCGCGCGTGAGCCGCCGCA TTTGGTCGCGGAGGG Smed_2650 2753171 - 2755126 + | transketolase TERM 2313 2755221 - 2755243 + G 71 -13.4 -2.57344 | opp_overlap 2755219, overlap 2755220 AAGTCGCCATCAACG GTTTCGGCCG CAT CGGCCGCAAC ATTCTCCGCGCCATC Smed_2651 2755196 - 2756206 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 2314 2756332 - 2756301 - g 100 -27.4 -3.63073 | opp_overlap 2756301 CAGATCCTTGAACAA CGCTCTCGGCGCGG CTAT CCGCGCCGAGAGCG TTCTCATCGGCGAAC TERM 2315 2756301 - 2756332 + G 100 -27.4 -3.40403 | opp_overlap 2756301 CAGATCCTTGAACAA CGCTCTCGGCGCGG CTAT CCGCGCCGAGAGCG TTCTCATCGGCGAAC Smed_2652 2756212 - 2756802 + | hypothetical protein pgk 2756802 - 2758001 + | phosphoglycerate kinase TERM 2316 2758279 - 2758300 + F 100 -15.9 -3.72027 | AAAACTTGTTTCATC CGCTGGTCC ATTG GGACCAGCG TTGTTCGTAGGAGAT Smed_2654 2758320 - 2759345 + | fructose-bisphosphate aldolase TERM 2317 2759420 - 2759366 - f 89 -16.5 -3.06087 | gap 1, opp_overlap 2759374 2759374 2759377, overlap 2759374 2759377 AAGATACCGGTAAGA GGGAGAGAGG-AGAGGTCCGGCGGCA GCGA TGCCGCCGGACCTCTACCTTTTTCGG ACAAGTAATTGTCAG TERM 2318 2759411 - 2759374 - f 100 -25.7 -2.9518 | opp_overlap 2759374 2759374 2759377, overlap 2759366 2759377 GGTAAGAGGGAGAGA GGAGAGGTCCGGCGGCA GCGA TGCCGCCGGACCTCTAC CTTTTTCGGACAAGT TERM 2319 2759374 - 2759412 + F 100 -25.5 -4.57073 | gap 1, opp_overlap 2759374 2759366 2759377, overlap 2759374 2759377 GGTAAGAGGGAGAGA GG-AGAGGTCCGGCGGCA GCGA TGCCGCCGGACCTCTACC TTTTTCGGACAAGTA TERM 2320 2759374 - 2759411 + F 100 -25.7 -3.33922 | opp_overlap 2759374 2759366 2759377, overlap 2759374 2759377 GGTAAGAGGGAGAGA GGAGAGGTCCGGCGGCA GCGA TGCCGCCGGACCTCTAC CTTTTTCGGACAAGT TERM 2321 2759408 - 2759377 - f 100 -26 -2.71094 | opp_overlap 2759374 2759374 2759377, overlap 2759374 2759366 AAGAGGGAGAGAGGA GAGGTCCGGCGGCA GCGA TGCCGCCGGACCTC TACCTTTTTCGGACA TERM 2322 2759377 - 2759408 + F 100 -26 -2.83903 | opp_overlap 2759377 2759374 2759366, overlap 2759374 2759374 AAGAGGGAGAGAGGA GAGGTCCGGCGGCA GCGA TGCCGCCGGACCTC TACCTTTTTCGGACA TERM 2323 2760072 - 2760116 + G 71 -8.3 -3.90744 | GGCCGGTGCGCATTT CGGTGGGGTTGCCCTTCGCCG TCG CGGAGGTGCGCGACCTGGCCG TTCTTTCGAAGGCGC Smed_2655 2759579 - 2760496 + | PhzF family phenazine biosynthesis protein Smed_2656 2762450 - 2760546 - | adenylyl cyclase class-3/4/guanylyl cyclase TERM 2324 2761039 - 2761017 - G 72 -4.1 -4.56597 | CGCGCGCTCGAAAAA GCCGATTGC TTCCT GGAATCGAC CCTGCGCGAACAGGA Smed_2657 2762780 - 2762625 - | hypothetical protein TERM 2325 2763605 - 2763621 + G 76 -9.4 -4.07568 | CGCCAACGGCGCCTT CGGCAC GCTGG GTGCCG TTTTCGGCCGGCAGG Smed_2658 2762955 - 2764256 + | major facilitator transporter Smed_2659 2764243 - 2764431 + | hypothetical protein TERM 2326 2764567 - 2764534 - f 84 -16.3 -2.62184 | gap 1, opp_overlap 2764531 TCCCGCTCTAGATCA CGATGTTCTTAGGTCG AAT CGACCTAAGAACAT-G AACATGATCGATTCC TERM 2327 2764703 - 2764735 + F 78 -4.2 -4.92363 | gap 1, opp_overlap 2764712 GGTTTCCTTCCGGAC TCAGACAATTTCACC GACT GGCGAA-TGGTCTGA TTTTTCTCCCTGTTT TERM 2328 2764759 - 2764777 + F 100 -11.7 -5.72207 | CCTGTTTTACCTTGA GAGCCGC TTCGC GCGGCTC TTTTTTTGCTTTACG Smed_2660 2764959 - 2765477 + | hypothetical protein TERM 2329 2765525 - 2765509 - T 80 -10.8 -4.0162 | opp_overlap 2765509 CGCTGAGATTATAAA CCCGGC CATGT GCCGGG TTTTTTCTTTGGGCA TERM 2330 2765509 - 2765525 + T 100 -10.8 -5.63517 | opp_overlap 2765509 CGCTGAGATTATAAA CCCGGC CATGT GCCGGG TTTTTTCTTTGGGCA TERM 2331 2765685 - 2765670 - T 100 -11.8 -5.4833 | overlap 2765648 CCAGCCAACAAAAAA GCCCGG CATG CCGGGC TTCGCAATATGCAAT rpmE 2765935 - 2765714 - | 50S ribosomal protein L31 TERM 2332 2766038 - 2766005 - H 75 -10.2 -3.77087 | opp_overlap 2766023, overlap 2766006 GACCGAACACGTAAA TGAAGCCGCAGACC GCTCTT GGGCCGCGGCTTCC CAATTCGATGCCGTG TERM 2333 2766037 - 2766006 - H 76 -13.7 -2.8577 | opp_overlap 2766023, overlap 2766005 ACCGAACACGTAAAT GAAGCCGCAGACC GCTCTT GGGCCGCGGCTTC CCAATTCGATGCCGT TERM 2334 2767616 - 2767583 - g 75 -14 -3.05384 | gap 2 GCGTGCCGGACGCAA GCCGCGA-AGCGG-TG CGCG CAGCCGCTGTCGCGGC GCAGGCCGAAGAGTT Smed_2662 2766247 - 2768040 + | lipid ABC transporter ATPase/inner membrane protein Smed_2663 2769071 - 2768043 - | hypothetical protein Smed_2664 2770180 - 2769074 - | hypothetical protein TERM 2335 2770086 - 2770075 - G 71 -5.8 -4.32034 | CGATGATCAGGAAAA GGAC CATC GTCC AGAAATAGGGCATTG Smed_2665 2771274 - 2770474 - | inositol-phosphate phosphatase TERM 2336 2771476 - 2771448 - R 72 -6 -4.37092 | overlap 2771434 2771432 2771431 AGGCCGCGGAGAAAA CCGGGGCTTC AAGACCACA AAAACCCCGG AAGTTCAAGAGAAAT Smed_2666 2772659 - 2771514 - | Sel1 domain-containing protein TERM 2337 2771829 - 2771870 + g 83 -12.3 -3.99324 | opp_overlap 2771826 CGCCGTATCATAGCC CGCGCGCGCCGCCC-TGAG CAGCCA CTCGCGGGCG-CGGGCGCG TTTGTCGTCCTCGAC TERM 2338 2772039 - 2772060 + g 73 -3 -4.7373 | gap 2, overlap 2772042 2772043 GTTGAACTGAGCCGA GGCATTGCCG AGAT CGGCA--GCC TTTTTCATGAGCTCG TERM 2339 2772405 - 2772447 + g 73 -8.2 -4.07568 | CATGCGATCGATCAC GTTGACGCCCTTCGAAGGCG CAC TGCCATCGCTGGGCTTCGGC TTTTCCGGCCCGGCC Smed_2667 2773322 - 2772669 - | thiamine-phosphate pyrophosphorylase Smed_2668 2773423 - 2774205 + | hypothetical protein Smed_2669 2774303 - 2774563 + | regulatory protein ArsR TERM 2340 2774639 - 2774613 - T 73 -11.5 -3.34344 | GCACCGCCTAAGGAA GCCGACCGGAC GCGGA GCCCGGCCAGC CAATGTGAGTGTATC Smed_2670 2774899 - 2774726 - | hypothetical protein Smed_2671 2775110 - 2775313 + | hypothetical protein Smed_2672 2775365 - 2775829 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Smed_2673 2775826 - 2776875 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 2341 2777000 - 2777017 + F 88 -10.5 -4.56133 | CTGCCTACTTGGACA GCGCGCT GAAC GGCGCGC TTTTGATTGTTAGAA rpmJ 2777079 - 2777204 + | 50S ribosomal protein L36 TERM 2342 2777277 - 2777311 + F 72 -6.4 -4.4017 | gap 1, overlap 2777279 2777280 AAATTGATTTGATCT TGTTTCATGGCGGGC TACGAT GCCCGCCATGCG-CG TTTTCTCGAACTTGA TERM 2343 2777448 - 2777431 - g 79 -9.1 -4.15565 | opp_overlap 2777433 CTCACCACTCCAAAA GAGCGCG TCGA CGCACTC TTCACCGATCTCAAG Smed_2675 2777296 - 2777907 + | TPR repeat-containing protein Smed_2676 2779531 - 2778092 - | pyruvate kinase TERM 2344 2778708 - 2778755 + g 82 -11.3 -4.07568 | opp_overlap 2778697, overlap 2778712 2778715 TCAAGCATCTGCGTT GCGA-CCACGACGGGCTTGCCGG CTCG CCGGCAGGCCCG-CGTCAATTGC TTTTGAAGCCCCGGC TERM 2345 2778715 - 2778747 + g 87 -19.2 -2.66118 | gap 1, overlap 2778712 2778708 TCTGCGTTGCGACCA CGACGGGCTTGCCGG CTCG CCGGCAGGCCCG-CG TCAATTGCTTTTGAA Smed_2677 2779968 - 2779531 - | hypothetical protein Smed_2678 2780252 - 2781046 + | N-formylglutamate amidohydrolase Smed_2679 2781066 - 2781371 + | hypothetical protein Smed_2680 2781476 - 2781748 + | hypothetical protein Smed_2681 2782971 - 2782786 - | hypothetical protein TERM 2346 2783102 - 2783130 + r 89 -16.1 -3.45945 | opp_overlap 2783102 GCTTCGAAAACAAAA GAGCGTTTCAGCG GAA CACTGAAACGCTC TTGCTTATGCGTGGC TERM 2347 2783130 - 2783102 - R 100 -18.3 -5.07652 | opp_overlap 2783102 GCTTCGAAAACAAAA GAGCGTTTCAGCG GAA CACTGAAACGCTC TTGCTTATGCGTGGC Smed_2682 2784980 - 2783154 - | hypothetical protein TERM 2348 2784118 - 2784140 + g 71 -9 -3.75738 | GGAGCCTCTTCATCG CCACCGGCGA CAA TCGCCGCGGG TTCTTCATCCTCGTC TERM 2349 2784250 - 2784264 + g 76 -12.8 -3.40403 | ACCTGGATCGCAGAC GCGCCG ACG CGGCGC TTATAATCGGCCACG TERM 2350 2784369 - 2784347 - G 75 -13.5 -3.03124 | overlap 2784349 CGCCATCGGGGAAGA GACGCGCAA GCTCG TTGCGCGTC ATGCGCGGCCAGGCG Smed_2683 2786810 - 2785161 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2351 2786287 - 2786305 + g 72 -8 -4.19506 | opp_overlap 2786276 2786275 AAACCGACGGACCCG CCGCGTGG ACG CCGGGCGG TTTTGACCTTGCCGT TERM 2352 2788432 - 2788414 - g 80 -16 -2.55253 | overlap 2788405 AGGAAGGCGAACTGA CGGCCGAG GAT CTCGGCCG CATATGGATGTCGGT Smed_2684 2786895 - 2788778 + | pepF/M3 family oligoendopeptidase TERM 2353 2789378 - 2789389 + G 76 -5.8 -4.64676 | overlap 2789374 CAGTGCTGCTGTCGC GCTC ACCC GAGC TTTTCTTCCGGGTCG TERM 2354 2789960 - 2789992 + G 73 -3.4 -4.68593 | TGAAGGCCCGTTTCG CCG-TCGGCGATGCGG AGA TCGC-TCGATGATCGG TTTTTCCCTGATCGA Smed_2685 2788831 - 2789988 + | para-aminobenzoate synthase component I TERM 2355 2790109 - 2790135 + G 74 -12.3 -3.53012 | gap 1 TTGCGGATGCGTCAG CAGC-CGGGCCG GCGC TGGCCCGCGCTG TTTCGGGCGCCCAAG Smed_2686 2789985 - 2790611 + | hypothetical protein Smed_2687 2791526 - 2790576 - | diguanylate cyclase TERM 2356 2791944 - 2791933 - g 84 -2.2 -5.24799 | overlap 2791934 GGAGAAAGACAAAAA TGGC AGAC ACCA CCTATCCGGTTTACG TERM 2357 2793205 - 2793194 - g 70 -7.2 -4.07568 | CTGGGCTCTGGAAAA CCCG AAGG CGGG CATCGTCGAGGCCGA Smed_2688 2791932 - 2793383 + | homospermidine synthase TERM 2358 2793411 - 2793436 + F 100 -15.5 -5.75342 | gap 1, opp_overlap 2793411 GCGGACTCTGATCAA GGCCCGGAGCAC CCT GT-CTCCGGGCC TTTTTTTTGCGAGCG TERM 2359 2793436 - 2793411 - f 85 -15.5 -3.15544 | gap 1, opp_overlap 2793411 GCGGACTCTGATCAA GGCCCGGAG-CA CCC TGTCTCCGGGCC TTTTTTTTGCGAGCG TERM 2360 2793581 - 2793608 + F 76 -12 -3.32844 | opp_overlap 2793580 2793579, overlap 2793582 AGACGCCGCACAATT CTCCGTGGACCG GTTC CGGTTCACGGAA TTATGCGGTAGAGCG TERM 2361 2793582 - 2793607 + F 81 -15.5 -2.59564 | opp_overlap 2793580 2793579, overlap 2793581 GACGCCGCACAATTC TCCGTGGACCG GTTC CGGTTCACGGA ATTATGCGGTAGAGC Smed_2689 2793693 - 2794061 + | putative outer membrane lipoprotein TERM 2362 2794082 - 2794098 + F 100 -10.8 -5.72622 | TCACTTCACCGAGCA GCCCCC CGACC GGGGGC TTTTTTCTTTCTGGG TERM 2363 2795069 - 2795058 - g 76 -7.2 -4.30809 | opp_overlap 2795057 CAACACCGACGAAAA GGCC GAGG GGCC CTATCCTACGATGGT TERM 2364 2796170 - 2796143 - g 79 -13.4 -3.53012 | CGCGGGCGCTGGAAA TCGGCCGAGAGC TGGA GATCCCGGCCGA ATAAGACGATTTGCC Smed_2690 2794291 - 2796174 + | 5'-nucleotidase domain-containing protein TERM 2365 2796197 - 2796224 + F 100 -18.4 -4.85782 | overlap 2796199 TGCCTCGGCATTTCC CACCGGCGCGGG CTTT CCCGCGCCGGTA TTTCTTTTTAGAAAG TERM 2366 2796199 - 2796222 + F 100 -21 -4.04587 | overlap 2796197 CCTCGGCATTTCCCA CCGGCGCGGG CTTT CCCGCGCCGG TATTTCTTTTTAGAA hemH 2796292 - 2797329 + | ferrochelatase TERM 2367 2797366 - 2797378 + T 75 -10.5 -3.72695 | opp_overlap 2797366 GTGAGCTGCAAGGAA GGCCG TTA CGGCC TTTCCTGGAAGAGCT Smed_2692 2798409 - 2797393 - | NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein TERM 2368 2798058 - 2798104 + g 83 -12.3 -4.07568 | gap 1, overlap 2798059 CGGCATAGGTGACGA CCCGGTCGCCTTCGCGGTCGAG CCCC TTCG-TTACGAAGGCGACCGGC TTTTCCCGGCCCAGC TERM 2369 2798059 - 2798103 + g 81 -15.8 -3.04398 | gap 1, overlap 2798058 GGCATAGGTGACGAC CCGGTCGCCTTCGCGGTCGAG CCCC TTCG-TTACGAAGGCGACCGG CTTTTCCCGGCCCAG Smed_2693 2800494 - 2798446 - | short chain dehydrogenase TERM 2370 2799026 - 2799060 + g 78 -3.3 -5.00616 | opp_overlap 2799045, overlap 2799046 TCGACCGCCTCGGAA CTCGTCACGTCGCAG AGCAC CGGCAGCGCGCCGAG TTTTTTCGCCGCCGC TERM 2371 2799189 - 2799202 + g 83 -9.5 -4.27192 | TGACGATTGCAACCT GCCGC GTCA GCGGC TTTTCCTGCACCTTT TERM 2372 2799331 - 2799355 + g 86 -6.4 -5.03314 | gap 1 ATCTATCGTTGCTTC CGCAAC-GTCG GCGC CGACCGTCGCG TTTTTTCGCGCTGCC Smed_2694 2801637 - 2800573 - | ABC transporter related TERM 2373 2800684 - 2800658 - G 74 -5.1 -4.56597 | gap 1, overlap 2800660 GCGCCCTCCGAAAAA CG-TGCCGCCTT GTCG ACGACGGCAACG AAGCTTCCCTCCGGA TERM 2374 2800735 - 2800713 - G 83 -4.6 -5.0133 | GACCTTCGCAAAAAA GCTGCGCGTC ATG GCCGAGCCGC TCGGTGAGGATCGCC Smed_2695 2802422 - 2801697 - | short-chain dehydrogenase/reductase SDR TERM 2375 2801782 - 2801819 + g 100 -14.8 -4.21989 | gap 1, opp_overlap 2801779 TCGAGGATGAGATCT GCGACGA-CGTCGGCGG AAATG CCGCCGCCGATCGCCGC TTTGTTCGCCTTGTA Smed_2696 2803990 - 2802494 - | extracellular solute-binding protein TERM 2376 2802691 - 2802710 + g 71 -9.2 -3.75153 | ACAGGTGGCGGGTCG TGCCGGCG CCGA CGCGGGCA TTTGCCTTGACGCGC TERM 2377 2803153 - 2803127 - G 71 -13.6 -2.62396 | opp_overlap 2803129 GAGCTTGGTATAGTA GTCGAGCGCGGC AAT GCCCCGCTCGTC ATTGCCCACGAACTT TERM 2378 2803129 - 2803151 + g 75 -14.8 -2.70932 | opp_overlap 2803127 GCTTGGTATAGTAGT CGAGCGCGGC AAT GCCCCGCTCG TCATTGCCCACGAAC Smed_2697 2804941 - 2804060 - | binding-protein-dependent transport systems inner membrane component Smed_2698 2805830 - 2804943 - | binding-protein-dependent transport systems inner membrane component TERM 2379 2805480 - 2805453 - G 82 -11.2 -3.99324 | CTCCATCAGGAGAAA CATCATGCCGGC GATA GCCGGCGGGATG ACCAGCGTCATCGAA glpD 2807501 - 2805966 - | glycerol-3-phosphate dehydrogenase TERM 2380 2806763 - 2806773 + g 78 -6.8 -4.57073 | TATAGCAGCGATCGT GCTC GTA GAGC TTTTTGACCACGATG Smed_2700 2808310 - 2807498 - | HAD family hydrolase Smed_2701 2809670 - 2808315 - | 3-dehydroquinate synthase Smed_2702 2809744 - 2810769 + | DeoR family transcriptional regulator TERM 2381 2811780 - 2811791 + G 70 -7.2 -4.00756 | opp_overlap 2811773, overlap 2811772 GCTCGAAAGCTGCCA GCGC GGCG GCGC TTATTTCGTCAACTG Smed_2703 2810824 - 2812389 + | carbohydrate kinase FGGY Smed_2704 2812499 - 2813497 + | band 7 protein Smed_2705 2813494 - 2813949 + | hypothetical protein TERM 2382 2813978 - 2813964 - f 70 -4.2 -4.58663 | AGCACGCCGGAAAAA CCGC GTTCCGA GCGG CTGTACAGAAACGAT TERM 2383 2815417 - 2815468 + G 74 -10 -3.70902 | gap 1, opp_overlap 2815426 ATCAGGGCGCATCGA GCGACACCACG-CGCGTCGGCGTCG GCC TGACGCTGCGGCGATGACGTGTCGC TTTGCCTCTCCGGAG Smed_2706 2814057 - 2815460 + | hypothetical protein Smed_2707 2816411 - 2815524 - | UTP-glucose-1-phosphate uridylyltransferase Smed_2708 2816713 - 2817930 + | lytic murein transglycosylase TERM 2384 2819189 - 2819170 - g 71 -12.8 -3.0395 | overlap 2819160 2819182 ATACACCGCTCAAGA GCACGGGC AAAA GCCCGCGC GACCGGCTCGTGGAA Smed_2709 2818041 - 2819291 + | hypothetical protein TERM 2385 2819473 - 2819448 - T 72 -4.5 -4.62471 | overlap 2819449 TCTAATGGCCAAAAA GGGTGCGCGTC GGGA GACGCCCGCCT GAACTACCGCGGCAG gltD 2820934 - 2819477 - | glutamate synthase subunit beta Smed_2711 2825760 - 2821036 - | glutamate synthase (ferredoxin) TERM 2386 2826057 - 2826037 - H 72 -9.8 -3.70902 | opp_overlap 2826037 GCCCCTAGACCGAAA TAGGACAG CAAAC CTGTCCTA TTTCATGCGCTCTAT TERM 2387 2826037 - 2826057 + H 72 -9.8 -3.75933 | opp_overlap 2826037 GCCCCTAGACCGAAA TAGGACAG CAAAC CTGTCCTA TTTCATGCGCTCTAT TERM 2388 2827130 - 2827175 + G 75 -14 -3.05384 | gap 2, opp_overlap 2827128 CAAGCCAACGCAATG GCGCGGCGCCTCGCCGACGGCA TCAC TGCC-TCGGCGGAGAGCCG-GC TTGCCTGGACGCCGG TERM 2389 2827242 - 2827256 + G 86 -7 -5.09426 | CGGCGAGCCGGCTGC GGGAGC AGG GCGCCC TTTTTTACGATTGGG Smed_2712 2826338 - 2827384 + | threonine aldolase Smed_2713 2828262 - 2827417 - | LysR family transcriptional regulator TERM 2390 2828112 - 2828097 - G 74 -9 -3.90112 | CGGCCGTCAACGAAA CGCGAT GCGT ATCGCG CGTGACAAGCTTGCG Smed_2714 2828354 - 2829349 + | bile acid:sodium symporter TERM 2391 2829359 - 2829382 + T 93 -8 -5.28942 | opp_overlap 2829354 2829361, overlap 2829361 ACCTGAGCAATCGAA AACGGCGCCC TTTC GAGCGCCGTC TTTTTCTTTCCGATG TERM 2392 2829361 - 2829380 + T 85 -10.6 -4.27026 | opp_overlap 2829354 2829361, overlap 2829359 CTGAGCAATCGAAAA CGGCGCCC TTTC GAGCGCCG TCTTTTTCTTTCCGA TERM 2393 2829380 - 2829361 - T 93 -12.8 -4.30014 | opp_overlap 2829361 2829359, overlap 2829354 CTGAGCAATCGAAAA CGGCGCCC TTTC GAGCGCCG TCTTTTTCTTTCCGA Smed_2715 2829872 - 2829411 - | heat shock protein Hsp20 TERM 2394 2830104 - 2830090 - H 71 -11.4 -3.22135 | overlap 2830088 GATAGAAGGAAGATA CTGGGG TCT CCCCAG GGCTGAAGTGACATG TERM 2395 2830138 - 2830180 + H 100 -10.1 -5.63517 | gap 1 CTTCTCCCTTCAGCG GCCGGAAACGGT-GAT CGTCCGGATTTC ATCCACCGTTTCCGGC TTTTTTCTTTGACGG Smed_2716 2830247 - 2831260 + | alpha/beta hydrolase fold Smed_2717 2832153 - 2831287 - | histidinol-phosphate phosphatase, putative TERM 2396 2831698 - 2831670 - G 83 -13.1 -3.85698 | CCGGGCCGCGATAAA GCGCCTTCTCGCC GTC GGCGAAATAGCGC TCGCCGGTGAATGGC TERM 2397 2832291 - 2832312 + r 100 -12.3 -4.56775 | gap 1, overlap 2832293 TTCCTCCCTAGACTT G-ACCGCGCC ATT GGCGCGGTTC TTTTTGAGCACGGGT TERM 2398 2832293 - 2832309 + r 100 -15.1 -4.40561 | overlap 2832291 CCTCCCTAGACTTGA CCGCGCC ATT GGCGCGG TTCTTTTTGAGCACG Smed_2718 2833249 - 2832368 - | N-formylglutamate amidohydrolase TERM 2399 2832456 - 2832470 + g 75 -4.2 -4.73388 | opp_overlap 2832434 AGGTCGGCCTCGAGA GCCG CAAATCC CGGC TTTTTGATCAGCGTT Smed_2719 2833438 - 2833800 + | response regulator receiver protein TERM 2400 2833860 - 2833885 + T 100 -14.8 -4.86731 | opp_overlap 2833863 CCGCAGCACCGCATC GAAGCCGCTC CAATCA GAGCGGCTTC TTTTGTTTCAAGAGG Smed_2720 2834457 - 2834218 - | HicB family protein Smed_2721 2835011 - 2835397 + | Sel1 domain-containing protein TERM 2401 2835740 - 2835758 + G 100 -10.2 -5.63517 | opp_overlap 2835740 TGAAGGTGATGAGAA GGTCGGGT TCA GCCCGGCC TTTTTTGTTTGCGCA Smed_2722 2835699 - 2835863 + | hypothetical protein TERM 2402 2836223 - 2836200 - g 70 -11.8 -3.18134 | gap 1, opp_overlap 2836213, overlap 2836198 CCAAGGAATTCAACA CGATTGCCGTC GAC GACGGC-ATCG CCATGGGCCATGACG Smed_2723 2835974 - 2837812 + | dihydroxy-acid dehydratase TERM 2403 2837828 - 2837863 + T 90 -17 -3.28712 | gap 1, opp_overlap 2837836, overlap 2837836 GCAGCATCGCAGCTG TCGCAGAAGGCTCCCAC ACC GAGGGAGCCTTCT-CGA TTCTAAGCCGGCGAG TERM 2404 2837836 - 2837856 + T 79 -12.5 -3.45054 | opp_overlap 2837836, overlap 2837828 GCAGCTGTCGCAGAA GGCTCCCAC ACC GAGGGAGCC TTCTCGATTCTAAGC TERM 2405 2837856 - 2837836 - T 79 -12.5 -3.29144 | opp_overlap 2837836 2837828 GCAGCTGTCGCAGAA GGCTCCCAC ACC GAGGGAGCC TTCTCGATTCTAAGC Smed_2724 2838284 - 2837880 - | glutathione-dependent formaldehyde-activating GFA Smed_2725 2838386 - 2838853 + | MarR family transcriptional regulator TERM 2406 2838860 - 2838839 - T 80 -5 -4.98255 | overlap 2838840 CGCGAACGAGAAAAA GCGGCCCC GCCGTA GGAGCCGA CCGGCAAGCCCATAC TERM 2407 2838940 - 2838902 - T 71 -10.2 -3.53012 | overlap 2838903 2838938 GTCCTCGGGCGGAAA GGGTCTCCGGCGCCGC AAACTGG ACGGCGCCAGACACCT GCGACAAGCACAGCT TERM 2408 2838939 - 2838903 - T 76 -13.7 -2.71712 | overlap 2838902 2838938 TCCTCGGGCGGAAAG GGTCTCCGGCGCCGC AAACTGG ACGGCGCCAGACACC TGCGACAAGCACAGC TERM 2409 2839012 - 2838968 - T 95 -14.2 -3.73775 | gap 1, opp_overlap 2838968 2838994, overlap 2838974 2838981 GCTATGTGTACGAAA CAGCAAGCAGACAGCGCCGCC TTAG GGCGGCGCAATCAGCC-GCCG CTTTCGATCTCGGCA TERM 2410 2839007 - 2838974 - T 90 -15.9 -3.48269 | opp_overlap 2838968 2838994, overlap 2838968 2838981 TGTACGAAACAGCAA GCAGACAGCGCCGCC TTAG GGCGGCGCAATCAGC CGCCGCTTTCGATCT TERM 2411 2839000 - 2838981 - T 88 -16.4 -3.03212 | opp_overlap 2838968 2838994, overlap 2838974 2838968 AACAGCAAGCAGACA GCGCCGCC TTAG GGCGGCGC AATCAGCCGCCGCTT Smed_2726 2839446 - 2839003 - | pseudoazurin Smed_2727 2839831 - 2839490 - | putative cytochrome c protein TERM 2412 2839568 - 2839586 + g 80 -14.6 -3.14344 | AAGGGCCTCGTTGGC CGGCATCG GGC CGATGCCG TTGATGACAGCCGTA TERM 2413 2839911 - 2839858 - R 77 -10.3 -3.92832 | gap 1, overlap 2839868 2839870 AAACTGCTGAAAGAA GATCGTGAAAC-AGGGTTCCGCTACA CAG CGCAGCGGAACCCTTGCGGCACAGTC AGGCAACGGTGAGTG TERM 2414 2839900 - 2839868 - R 88 -14.9 -3.62176 | overlap 2839858 2839870 AAGAAGATCGTGAAA CAGGGTTCCGCTACA CAG CGCAGCGGAACCCTT GCGGCACAGTCAGGC TERM 2415 2839898 - 2839870 - R 93 -17.5 -3.38201 | overlap 2839868 2839858 GAAGATCGTGAAACA GGGTTCCGCTACA CAG CGCAGCGGAACCC TTGCGGCACAGTCAG Smed_2728 2841139 - 2839910 - | oxidoreductase molybdopterin binding TERM 2416 2840627 - 2840570 - G 74 -9.2 -3.85698 | gap 2 CGTTCCCGTGATAAA CCGGGCGCCATCTGCAGGGCCGCC CAGGGCGTCGAC AACGGCCC-GCAGA-GGCACCCCG CTCCAGATGACACAG Smed_2729 2842060 - 2841299 - | putative transmembrane anti-sigma factor TERM 2417 2841418 - 2841401 - G 74 -5.5 -4.41616 | overlap 2841403 AGCCCCCGAAAGAAA GGCGAAG CGGG CTTCGTC CATCCCTCGCGCGAC Smed_2730 2842581 - 2842057 - | ECF subfamily RNA polymerase sigma-24 factor Smed_2731 2843207 - 2842761 - | MarR family transcriptional regulator Smed_2732 2843353 - 2843826 + | hypothetical protein Smed_2733 2844055 - 2844816 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2418 2844874 - 2844835 - T 77 -12 -3.53012 | overlap 2844844 2844845 2844855 TTGGCTCCTCTCAAA CGCGGGAAAGGCGGCGAA GATC TTCGCCGCTACCCCGGCG TGACGCGGGCATGCC TERM 2419 2844865 - 2844844 - T 71 -10.1 -3.5936 | overlap 2844835 2844845 2844855 CTCAAACGCGGGAAA GGCGGCGAA GATC TTCGCCGCT ACCCCGGCGTGACGC TERM 2420 2844864 - 2844845 - T 76 -13.6 -2.75294 | overlap 2844844 2844835 2844855 TCAAACGCGGGAAAG GCGGCGAA GATC TTCGCCGC TACCCCGGCGTGACG Smed_2734 2845775 - 2844864 - | LysR family transcriptional regulator Smed_2735 2845880 - 2846914 + | aldo/keto reductase TERM 2421 2846960 - 2847014 + F 83 -4.6 -5.0538 | opp_overlap 2846984, overlap 2846965 GAACCGTCCAACGGT TTCGGCCGGCGCGGCCGCCAAGGAGC CAC GCGGCATGGCGGGCACACCAGGTGAA TTTTTTCCCATCACG TERM 2422 2847086 - 2847072 - f 74 -11.4 -3.60475 | opp_overlap 2847065 AATTTTTATGGTAAA CGCTCG AAT CGAGCG ATCTACAATGTTGCG Smed_2736 2847135 - 2849543 + | hypothetical protein TERM 2423 2850348 - 2850301 - g 74 -9.8 -3.7282 | gap 1, overlap 2850304 CGATCCGACCAATAA TATTCGC-GCCGGCACCGACCAC ATC GTGGTCGGCCATGGCCGCGATTA CGGCGACGTGGCACC Smed_2737 2849558 - 2850436 + | transglutaminase domain-containing protein Smed_2738 2850614 - 2851873 + | von Willebrand factor type A TERM 2424 2851894 - 2851917 + F 100 -12.4 -4.42238 | gap 1 AAGTCCAGCTCAAGT GGC-GCCCGGT TTT GCCGGGCTGCC TTTTGATTCGGCTGC TERM 2425 2851997 - 2851983 - f 70 -4.2 -4.58283 | opp_overlap 2851996 TAATCCTTTTAAAAA CACCTG TTG CAAGCG CTTCGGATCGATGCA Smed_2739 2852081 - 2854546 + | glycogen/starch/alpha-glucan phosphorylase TERM 2426 2855792 - 2855815 + G 73 -8.8 -4.06148 | overlap 2855775 ATGTCGACGGCCTGC GCGTCGATGC GGTC GCTTCGATGC TTTATCTCGACTATT Smed_2740 2854543 - 2856753 + | glycogen branching enzyme TERM 2427 2858062 - 2858080 + G 78 -11.6 -3.68351 | opp_overlap 2858056 2858057 GACGCGAAACGCTTC CGCCGCAC GGA GAGCGGCG TTTGCCTGATCACGC glgC 2856865 - 2858124 + | glucose-1-phosphate adenylyltransferase TERM 2428 2858329 - 2858299 - g 100 -3 -5.86465 | opp_overlap 2858328, overlap 2858317 AAGAAGAGAAAAAAA GCCGGCCGCTTCGA CAA TCTCTTCGGCCAGC CTGCGACAGTGCTTT TERM 2429 2859534 - 2859524 - g 74 -4.6 -4.56597 | opp_overlap 2859526, overlap 2859525 2859526 TTTCCTGGGCAAAAA GCGC GGA ACGC TACGTCTCGCTTTAC glgA 2858131 - 2859573 + | glycogen synthase TERM 2430 2860388 - 2860423 + G 74 -10.5 -3.78775 | gap 2 GCCTGATGCGCCCGA TTTCGG-CGCCG-CGTC GGAT GGCGACGGCGACCGGAA TTTGATCATCGGCAA TERM 2431 2860721 - 2860704 - g 78 -6.9 -4.57073 | opp_overlap 2860704, overlap 2860706 CACGTTCGCGAAAAA GACGGCC TCTG GGCCGTG CTGCTCTGGCTCAAC TERM 2432 2860719 - 2860706 - g 74 -9.5 -3.90048 | opp_overlap 2860704, overlap 2860704 CGTTCGCGAAAAAGA CGGCC TCTG GGCCG TGCTGCTCTGGCTCA TERM 2433 2860756 - 2860738 - g 71 -13.2 -3.01712 | TGCTCTGGCTCAACA TCCTTGCG GCG CGCAAGGA AAGCGCGCTCGAGAT TERM 2434 2860915 - 2860936 + G 73 -2.9 -4.7373 | gap 1 CGAGCTTCGGCGCGC TC-ACGGTCG ATA CGGCCGACGA TTTTTCCTACCATGA Smed_2743 2859579 - 2861207 + | phosphoglucomutase TERM 2435 2862504 - 2862530 + G 71 -10.8 -3.53224 | opp_overlap 2862490 ATCCGCCGCTACTGG CGCGGCGATCGT CAC ACGGTCGGTGCG TTTGCGACAGCGCTC Smed_2744 2861322 - 2863286 + | glycogen debranching enzyme GlgX Smed_2745 2863361 - 2863849 + | dehydratase TERM 2436 2864853 - 2864867 + G 71 -11.4 -3.53444 | GGCGACAAGCATCTC GTCGGC CGT GCCGAC TTTCACGGACGCTGG Smed_2746 2863842 - 2864909 + | hypothetical protein Smed_2747 2866144 - 2864933 - | alcohol dehydrogenase TERM 2437 2865275 - 2865297 + g 85 -6.1 -5.00884 | overlap 2865276 GACCGCATGATCGAC GCCGCCACG GGTCG CGAGGCGGA TTTTTTCGGCCGCGT TERM 2438 2866925 - 2866912 - g 72 -4.5 -4.65263 | ACCCTTCAAAAGAAA GCGAT TATA ACCGC CCGATGCAAGAAAGC Smed_2748 2866281 - 2866952 + | hypothetical protein Smed_2749 2867649 - 2867095 - | sarcosine oxidase gamma subunit family protein Smed_2750 2870635 - 2867642 - | sarcosine oxidase alpha subunit family protein TERM 2439 2867969 - 2867984 + g 78 -3.2 -5.06816 | CTTCATTCCGCGAAT GCCG ACGAAATC CGGC TTTTTCTTCGAAACT TERM 2440 2868501 - 2868473 - G 73 -13.2 -3.12351 | gap 1, overlap 2868416 CGTCGTCACATGGAA GCGGTCATCGGCC AGAC GGCCGACGAC-GC CGTCGTCATAGACGA Smed_2751 2870973 - 2870632 - | sarcosine oxidase delta subunit family protein TERM 2441 2870789 - 2870776 - G 75 -3.7 -4.69664 | overlap 2870777 GACAGCATTGAAAAA GCGGC CGCA GCCGT GGATATGGCGCCATC Smed_2752 2872346 - 2871093 - | sarcosine oxidase beta subunit family protein TERM 2442 2871809 - 2871834 + g 76 -13.9 -3.17763 | opp_overlap 2871788, overlap 2871827 CGTGGCGCGCCGTAC CGCCGCGGCGC TGCA GTGCCGCGCCG TTGATCGGATATCGG rpsU 2872653 - 2872868 + | 30S ribosomal protein S21 TERM 2443 2872928 - 2872899 - f 79 -13.5 -3.17075 | opp_overlap 2872900 CGCTTTCCAATGCAA GTGGCGGAGGCGA GGAA TCGCCGCCGCCAT TTTGTTATGGACACC TERM 2444 2872900 - 2872927 + F 100 -17 -4.77165 | opp_overlap 2872899 GCTTTCCAATGCAAG TGGCGGAGGCGA GGAA TCGCCGCCGCCA TTTTGTTATGGACAC TERM 2445 2873129 - 2873151 + G 75 -4.1 -4.77036 | gap 1, overlap 2873130 CGAACCGCCGCCGCC AGCG-CAAGC CGAA GCTTGCCGCC TTTTTCGTACTCGGC Smed_2754 2873062 - 2873949 + | TPR repeat-containing protein TERM 2446 2873970 - 2874005 + F 83 -15.4 -2.85351 | gap 1, overlap 2873974 GCTTGAATTGTTCGA CTTCAGACGCCCGCGAC CAT GTCGCGGGCGTC-GTCG TATCATCTGCGCGGA TERM 2447 2873974 - 2874002 + F 100 -20.3 -2.68434 | overlap 2873970 GAATTGTTCGACTTC AGACGCCCGCGAC CAT GTCGCGGGCGTCG TCGTATCATCTGCGC Smed_2755 2874085 - 2874558 + | hypothetical protein Smed_2756 2874835 - 2876055 + | putative adenylate/guanylate cyclase Smed_2757 2877590 - 2876187 - | NAD(P)(+) transhydrogenase (AB-specific) Smed_2758 2878010 - 2877600 - | putative NAD(P) transhydrogenase subunit alpha PART 2 transmembrane protein Smed_2759 2879159 - 2878011 - | NAD(P) transhydrogenase subunit alpha Smed_2760 2879695 - 2879471 - | aa3 type cytochrome c oxidase subunit IV Smed_2761 2882272 - 2879906 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2448 2880778 - 2880796 + g 93 -8 -5.15969 | opp_overlap 2880777 CCTCCTCGAAGGCAG CGCAGCCG CCA TGGCCGCG TTTTTTCGCTTCCGA TERM 2449 2881033 - 2881007 - G 71 -8.6 -3.91821 | opp_overlap 2881007 2881008 2881021, overlap 2881008 2881023 GAAAAACACCAAGAA CTCGTCGCCCAT CAG ACGGGCGGCGAT CGTTTCGGCTGCCGC TERM 2450 2881183 - 2881154 - G 76 -9.2 -3.99324 | opp_overlap 2881161 GTCGAGGAGCAGAAA GCCGACATCGCG GTCGGG CGCGGCGTCGAC CCCCATTGCGTCGTG TERM 2451 2882830 - 2882802 - g 78 -15.3 -2.72991 | overlap 2882813 GGAGACCGGCAACGA CGTCGACGAGATC CTC GACCGCGTCGACG GCGTGCTGGCAAGCG Smed_2762 2882653 - 2883408 + | peptidase C26 Smed_2763 2884370 - 2883405 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 2452 2883844 - 2883826 - G 74 -14.6 -2.63252 | opp_overlap 2883842, overlap 2883825 2883823 2883836 AGGCTCGAACAATAG GCGAAGGC AAG GCCTTCGC GGGGCGTACGCGTGT Smed_2764 2885466 - 2884444 - | alanine racemase Smed_2765 2886061 - 2885558 - | MarR family transcriptional regulator Smed_2766 2886175 - 2886966 + | creatininase TERM 2453 2886979 - 2887002 + F 77 -2.5 -5.06414 | TGATTTCTTTCCTGT CGATCGC-GAC GAAA GTCTGC-ATCG TTTTTGTTCCGCACA Smed_2767 2887097 - 2888206 + | cobalamin synthesis protein P47K Smed_2768 2888271 - 2889260 + | WD-40 repeat-containing protein Smed_2769 2889787 - 2889341 - | hypothetical protein TERM 2454 2889881 - 2889893 + H 74 -7.7 -4.18018 | opp_overlap 2889878 GTGTCGAATAGAGGG GCTTC ACC GAAGC TTTTCGCTCGCGGAC Smed_2770 2889978 - 2890679 + | lysine exporter protein LysE/YggA Smed_2771 2891288 - 2890698 - | GCN5-related N-acetyltransferase Smed_2772 2892509 - 2891376 - | Orn/DAP/Arg decarboxylase 2 TERM 2455 2893900 - 2893925 + G 71 -6.1 -4.3739 | overlap 2893901 CATCGCCGCTACCTG CCGACCAAGGT TCGC ACCTTCGTCGA TTTTCTCCACAACTG Smed_2773 2893045 - 2893959 + | LysR family transcriptional regulator Smed_2774 2894081 - 2894725 + | hypothetical protein Smed_2775 2894719 - 2895732 + | high-affinity nickel-transporter Smed_2776 2896056 - 2895844 - | hypothetical protein Smed_2777 2896751 - 2896053 - | GCN5-related N-acetyltransferase Smed_2778 2897571 - 2896867 - | hypothetical protein TERM 2456 2897709 - 2897693 - R 71 -7.2 -4.19735 | overlap 2897694 2897704 GCTTGGAAAATGAAA CGGCCG GACAA CAGCCG TCCTCGATCGCGTGC Smed_2779 2898372 - 2897734 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Smed_2780 2898599 - 2899072 + | adenylate cyclase Smed_2781 2899069 - 2899971 + | CHAD domain-containing protein TERM 2457 2899988 - 2899974 - f 74 -11.4 -3.49653 | AGCAGGGCGATAGAA CGGTCG CGG CGACCG ACGGACTTGACCCGC TERM 2458 2900424 - 2900412 - g 74 -4.8 -4.62783 | opp_overlap 2900412, overlap 2900399 2900397 CATCGACCCCAAAAA GGTG GTCGG CACC TATGTGGAGCCGAAG Smed_2782 2900053 - 2901000 + | rhodanese domain-containing protein TERM 2459 2901054 - 2901112 + T 73 -11.7 -3.02511 | gap 2 GCCGGGACCTTTTCC -C-CGCAGGCGGGGCGAAGGGAAAAGC TTCACCC GCTCTGCCCCTCTCCCCGCCTGCGCGA TCTTCACCAGCTCGG Smed_2783 2901892 - 2901116 - | YaeC family lipoprotein Smed_2784 2902596 - 2901931 - | binding-protein-dependent transport systems inner membrane component TERM 2460 2902502 - 2902491 - G 71 -5.8 -4.25104 | overlap 2902492 TGGTCGCGAGGAAAA TGCC GATG GGCA GACCGATCAGCGAGC Smed_2785 2903665 - 2902586 - | ABC transporter related TERM 2461 2902656 - 2902637 - G 72 -4.2 -4.56775 | gap 1, opp_overlap 2902639 2902640 ATTCTCGCTGAAAAA CCTCTCCGC CTT GCCG-GAGG TTTCGGCGTCGGCGC TERM 2462 2902817 - 2902805 - G 74 -4.8 -4.56597 | GGCGGCCCCGAAAAA GGTG AGGCG CACC ACGGCGCGATCGCCA Smed_2786 2905368 - 2903962 - | Beta-glucosidase TERM 2463 2905521 - 2905503 - R 100 -13.8 -5.4756 | AATGTCAATAAAAAA GGGCGAGG TAT CCCCGCCC TCACTCGATCACGTT TERM 2464 2905530 - 2905576 + r 95 -19 -2.52464 | CCCGCCCTCACTCGA TCACGTTCATGCTTTTAGGTCG GGT CGATCCAAAAACATGAACGTGA TCAATTCCAGGAAGA TERM 2465 2905654 - 2905668 + r 75 -10 -3.68302 | CTGAGCACCCCGCTT TTCCGC ATC GCGGAA TTGTTCAGATCTTGA Smed_2787 2906857 - 2905673 - | oxidoreductase domain-containing protein TERM 2466 2906081 - 2906093 + g 71 -4.7 -4.4078 | overlap 2906078 GAGCATCCCCTTGGC GCGCG CGC CGCCC TTTTCCTTGAAGCGC TERM 2467 2906797 - 2906780 - G 71 -8.3 -3.86015 | TACCGCGCCGATAAA GGCGCCG GAGC CGCCGCC CACCATGCCGAGTCG Smed_2788 2908080 - 2907028 - | xylose isomerase domain-containing protein Smed_2789 2909584 - 2908274 - | xylose isomerase TERM 2468 2909181 - 2909158 - G 77 -2.4 -5.00616 | gap 1, overlap 2909159 GGCGGTTCGAAAAAA GGTTGGCCGTG CCC CACAGC-AACT TGACGCCGGACTCGT Smed_2790 2909717 - 2910073 + | hypothetical protein Smed_2791 2911566 - 2910112 - | xylulokinase Smed_2792 2912613 - 2911576 - | regulatory protein LacI Smed_2793 2913150 - 2914526 + | peptidase S41 TERM 2469 2914643 - 2914632 - T 90 -7.2 -5.13016 | overlap 2914633 2914634 AAGGAAAAGGAAAAA CCGC GGCG GCGG AGGCGCCGCTCTCCA Smed_2794 2916261 - 2914672 - | EmrB/QacA family drug resistance transporter TERM 2470 2915740 - 2915713 - G 70 -7.8 -3.96624 | gap 1 GACGTTGACGAGAAA CAGCCAGTGCC AGGAGAA GGCA-TGGCTG AGATAGCCGCCGACC TERM 2471 2915776 - 2915746 - G 83 -16.8 -2.87931 | GGCATGGCTGAGATA GCCGCCGACCGTCG GGC CGATGGTCGGCGCC AGCGTCGCGATGAGA Smed_2795 2917500 - 2916292 - | secretion protein HlyD family protein TERM 2472 2917607 - 2917590 - H 72 -9.9 -3.6869 | opp_overlap 2917586 2917590 CATATCAAGGGCAAA TCGAACC GGTT GGTTCGA TTGATGAAGCAAGGT TERM 2473 2917649 - 2917633 - H 78 -3.5 -5.08088 | opp_overlap 2917633 2917635, overlap 2917634 AAGGTCGAAGAAAAA TCGTGCG TGC CGCCCGG CGCCCGCTATTCTTA Smed_2796 2917751 - 2918446 + | TetR family transcriptional regulator TERM 2474 2918951 - 2918933 - g 71 -13.2 -3.04461 | opp_overlap 2918940 CACGCACTTTGAAGA TCGAACCG CCC CGGTTCGA AGAAAGCCCGGGGCT Smed_2797 2918560 - 2919399 + | transcription activator effector binding TERM 2475 2919497 - 2919473 - f 73 -11.4 -3.33162 | opp_overlap 2919465, overlap 2919490 GACCGGAGCCGACAA CGTCGCCGTG AAAAG CACGGTGACG CTTGCGACTTTCGCA Smed_2798 2919565 - 2920320 + | integral membrane protein TerC TERM 2476 2920349 - 2920376 + F 100 -20 -3.14132 | opp_overlap 2920351 ATTGGTTACGCTGAA GAGGCCCGCATT CGCG AATGCGGGCCTC TTGCTGCGGGAGGGA TERM 2477 2920374 - 2920351 - f 89 -16.8 -3.04144 | opp_overlap 2920349 TGGTTACGCTGAAGA GGCCCGCATT CGCG AATGCGGGCC TCTTGCTGCGGGAGG gltX 2920720 - 2922177 + | glutamyl-tRNA synthetase TERM 2478 2923148 - 2923185 + G 71 -9.1 -3.73775 | gap 1 CCGTTCCCGCGCGTC TCCATGCCCGCCGCTGTC AAG GAC-GCGACCGGCATTGA TTTCCTAGCGATCAA Smed_2800 2922188 - 2923684 + | lysyl-tRNA synthetase Smed_2801 2924384 - 2923767 - | hypothetical protein TERM 2479 2925015 - 2924987 - g 76 -13.7 -3.21099 | CGGGCGGATGACGAA CCTGGCGCGCGCG CTG CGCGCGGACCCGG AGATCGCCAGGCTCG TERM 2480 2925482 - 2925507 + G 81 -15.5 -3.04792 | opp_overlap 2925476 2925481 CCCAAGCCAGCAGAC CTGCGTCGGCA TCGA TGCCGATGCAG TGTTGAAGCTCATCG Smed_2802 2924595 - 2925548 + | inosine/uridine-preferring nucleoside hydrolase Smed_2803 2925710 - 2926726 + | putative mRNA 3-end processing factor TERM 2481 2927443 - 2927457 + G 71 -12.8 -2.97747 | CCAACTCGCCAATGT CGGCGG GGT CCGCCG TCTCTACTCTCGCAG TERM 2482 2928058 - 2928040 - g 71 -13.2 -3.04461 | GACGGAGGGGGAAGA CGGAACGA GCC TCGTTCCG GTCGGCAAGGCCTAT Smed_2804 2926730 - 2928343 + | ATP-dependent DNA ligase TERM 2483 2929139 - 2929156 + G 77 -2.5 -5.00616 | overlap 2929140 CGGCCGGGACGGGCG GGGACGC GACG GCGCCCA TTTTTTCGGCGACCC Smed_2805 2928501 - 2931137 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) TERM 2484 2931174 - 2931187 + F 78 -3.1 -5.14563 | gap 1, overlap 2931165 TGCCTCCGGCGCGTT GC-ACG ACA CGTCGC TTTTTTCCTCCAAAG TERM 2485 2931246 - 2931297 + F 86 -15.8 -2.70932 | gap 1, opp_overlap 2931241 AAAAACATATGCCTT CTGCCGCTATGCGAATG-CGCGGAC ATC GTCCGCGCCACCCGTGCGGCGGCAG TCCTTGCGGGACCGG TERM 2486 2932325 - 2932342 + G 71 -12.7 -3.04792 | GCCTTGGCAGTCCGC TGGCGGC CGTC GCCGCCA TCTTCCACATCGTCA TERM 2487 2932470 - 2932515 + G 70 -11.7 -3.16055 | overlap 2932513 CTTCATGCCGATCAC CGCGACGCTGGCGATGGTGGC AAGT GCCGCCATGGCCGGAGTGCCG TTGCTCAACGGTTTC TERM 2488 2933119 - 2933134 + G 76 -8.2 -4.21275 | CTGGCGCTTGCGGCA GGGGCG TCGC CGCTCC TTTTCGGTGCATTCG Smed_2806 2931286 - 2934279 + | putative monovalent cation/H+ antiporter subunit A TERM 2489 2934312 - 2934329 + G 76 -6.3 -4.45253 | gap 1, overlap 2934312 2934313 CAGGCGGTATAGGCA C-CCTGAC CGC GTCAGGCG TTTATCTTCTTTTGA Smed_2807 2934281 - 2934628 + | putative monovalent cation/H+ antiporter subunit C Smed_2808 2934621 - 2936240 + | putative monovalent cation/H+ antiporter subunit D Smed_2809 2936243 - 2936728 + | cation antiporter Smed_2810 2936725 - 2937006 + | putative monovalent cation/H+ antiporter subunit F Smed_2811 2937003 - 2937374 + | monovalent cation/proton antiporter, MnhG/PhaG subunit Smed_2812 2938205 - 2937405 - | precorrin-4 C11-methyltransferase Smed_2813 2939443 - 2938202 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 2490 2938848 - 2938838 - GH 76 -8.2 -4.18018 | opp_overlap 2938838 GTCTTCGAGCGAAAA GCGC TCG GCGC GATGACTGGAGACAT TERM 2491 2939217 - 2939175 - GH 71 -12.7 -2.58714 | overlap 2939171 CCGTAGAGGAAGGGA TCGCCCGAGGCGAGCA-CCAC GAC GGGGCTGC-CGCGCCGGGCGA CGATGGCCTCTACCG TERM 2492 2940146 - 2940122 - gR 74 -11.3 -3.55444 | GGTCGAGCGCCGAAA GCCTGCCGACG TTC CGTCGGTCGGC GACTGTAGCGAGGCG Smed_2814 2939412 - 2940212 + | cobalt-precorrin-6x reductase Smed_2815 2940940 - 2940176 - | precorrin-3B C17-methyltransferase Smed_2816 2941710 - 2940937 - | precorrin-2 C(20)-methyltransferase cobH 2942339 - 2941707 - | precorrin-8X methylmutase Smed_2818 2943673 - 2942342 - | precorrin-3B synthase Smed_2819 2944619 - 2943849 - | precorrin 6A synthase TERM 2493 2944114 - 2944133 + g 71 -10.7 -3.53343 | overlap 2944107 TCGGCGAGCCTCCGG CCGGTGG TGATTT CCACCGG TTTGCCGACGAGGTT Smed_2820 2945444 - 2944719 - | uracil-DNA glycosylase TERM 2494 2946146 - 2946128 - g 78 -10.2 -4.07568 | opp_overlap 2946113 GGCCGCGCTGGAAAA GCTCGGTC TTT GGCCGAGC CTTGCCGGAAAGGTC TERM 2495 2946371 - 2946393 + G 78 -6.9 -4.59773 | gap 1 CTATCTCGACTTCGT GCGCTCGCCG AAGG CAGCG-GCGC TTTTTGAGGCTGAGG Smed_2821 2945643 - 2946428 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 2496 2946662 - 2946677 + G 70 -10.4 -3.62572 | GCCGCTGATCCTGCC GCCGGT GGTC ACCGGC TTTGCCCTGCTGCTC modB 2946480 - 2947181 + | molybdate ABC transporter permease protein Smed_2823 2947178 - 2948251 + | molybdate ABC transporter, ATPase subunit Smed_2824 2948742 - 2948284 - | ModE family transcriptional regulator TERM 2497 2948746 - 2948722 - G 73 -2.8 -4.71426 | overlap 2948723 GCGCGACCAATAAAA GGCGATGC GGGAACTGT GCATCGCT GCCGGAAACCGGCTC TERM 2498 2949380 - 2949322 - g 84 -11.5 -4.11216 | overlap 2949323 GGCCGAGCCGCAAAA GGCCGTTCCCGCCATCGC-CGCCGGAGCG CGT CGCGCCGGCGCGCG-CATCGTGACCGGCT GTGCCGTGCGGGGAA TERM 2499 2949379 - 2949323 - g 78 -15 -3.06515 | overlap 2949322 GCCGAGCCGCAAAAG GCCGTTCCCGCCATCGC-CGCCGGAGCG CGT CGCGCCGGCGCGCG-CATCGTGACCGGC TGTGCCGTGCGGGGA Smed_2825 2948831 - 2950162 + | FAD dependent oxidoreductase TERM 2500 2950551 - 2950569 + G 72 -7.3 -4.16943 | CGAACCGGCCGTCCG GCCGGGC GATCA GCCCGAC TTTTCCAATGTGAAG Smed_2826 2950501 - 2951733 + | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) Smed_2827 2951735 - 2952748 + | transketolase central region TERM 2501 2953139 - 2953110 - g 76 -8.6 -4.13767 | gap 2, overlap 2953111 CTGCGCAGGCTAAAA GGCCGGCGCCGGAA CCTG CTCCGGCGCC--CC GCGAAACCCCAAGCT Smed_2828 2952752 - 2954032 + | branched-chain alpha-keto acid dehydrogenase subunit E2 Smed_2829 2954038 - 2955432 + | dihydrolipoamide dehydrogenase Smed_2830 2956346 - 2955462 - | formyltetrahydrofolate deformylase TERM 2502 2956226 - 2956215 - G 88 -4.4 -5.252 | CAGCCTCATAAAAAA CAGA CCCG TCTG GAGATCGTCGAATTG Smed_2831 2957148 - 2956507 - | maleylacetoacetate isomerase Smed_2832 2958181 - 2957165 - | fumarylacetoacetate (FAA) hydrolase TERM 2503 2958210 - 2958229 + r 100 -9.2 -5.4477 | overlap 2958221 CCGATGCGTTGTTGC TCCGCGCC GGAC GGCGCAGA TTTTTTTGCCCGTTT Smed_2833 2959636 - 2958275 - | homogentisate 1,2-dioxygenase Smed_2834 2959713 - 2960171 + | MarR family transcriptional regulator Smed_2835 2960676 - 2960158 - | AsnC family transcriptional regulator TERM 2504 2961279 - 2961300 + G 72 -12.3 -3.31726 | overlap 2961277 2961282 GCGCGAGCGTGATCC GAAGCCGGC CGGC GTCGGCTTC TATTATCTCGACCAC Smed_2836 2960806 - 2961918 + | 4-hydroxyphenylpyruvate dioxygenase TERM 2505 2961983 - 2961957 - T 91 -18 -3.07994 | opp_overlap 2961943, overlap 2961937 GCGAACGTGAGGCAA CCGCGCGGCC GCGTAAA GGCCGCGCGG CTCCGGATGGCTGTC Smed_2837 2962785 - 2961997 - | response regulator receiver protein TERM 2506 2963984 - 2964004 + G 88 -8.9 -4.69549 | overlap 2963974 2963972 GCCGGGGGCGATCTT GCCCTCTCT GTT GGCGAGGGC TTTTCCTTTTCGCTT Smed_2838 2963705 - 2964226 + | hypothetical protein TERM 2507 2964429 - 2964441 + G 76 -7.7 -4.3534 | ATAGCAATGGCGGCT GCACA GGA TGTGC TTTTGCTCGTTGGCC TERM 2508 2964535 - 2964546 + G 75 -3.6 -4.84359 | opp_overlap 2964531, overlap 2964531 GGGTGGAAAAGGACG CGGC CATC GTCG TTTTTCTGACGCTGA Smed_2839 2964420 - 2964914 + | hypothetical protein TERM 2509 2965404 - 2965373 - g 70 -7.8 -4.07568 | GCCCGGCCTCGAAAA CGAGGCGGCAGACG CATT CGCCGGCATCCTCG CGGCAGAAAACTGGA TERM 2510 2966187 - 2966133 - g 100 -11.3 -4.78107 | gap 1, opp_overlap 2966131 CAGCATGATCAAAAA GGGCAGCCGTCGCTGTCCTGGGCGCC CTTC GGCGATGAGCCCAGCGA-GACTGCCC AATCCTTCGCGGCCC Smed_2840 2965056 - 2966318 + | tetratricopeptide TPR_4 Smed_2841 2967386 - 2966343 - | hypothetical protein Smed_2842 2967709 - 2969694 + | diguanylate cyclase/phosphodiesterase Smed_2843 2970490 - 2969759 - | GntR family transcriptional regulator Smed_2844 2970719 - 2971732 + | sugar isomerase (SIS) TERM 2511 2971790 - 2971767 - f 81 -15.4 -2.62515 | overlap 2971749 AATGCTCCGAGACGA CCGCGAATGT CTCC ACATTCGCGG TCGCCCGTGCAAGAC Smed_2845 2971817 - 2972629 + | ribokinase-like domain-containing protein TERM 2512 2972768 - 2972811 + T 79 -13.3 -3.14564 | gap 1 GCGGATCAGTGGGCG GGCAT-CGTCGCTCCGATGG CAGAC TCATTGGGGCGATGGATGCC TTCATCGGCGCATCA Smed_2846 2973743 - 2972988 - | ABC transporter related Smed_2847 2974640 - 2973759 - | hypothetical protein TERM 2513 2974582 - 2974553 - G 77 -2.7 -5.0538 | gap 1, opp_overlap 2974573 2974579, overlap 2974570 2974571 2974574 CCGTACCGGAAAAAA CCGCGAAGGCCAGG AAA CCCAGCC-CGGCAG CGCGAAGGTTGCCGG Smed_2848 2975601 - 2974630 - | polar amino acid ABC transporter, inner membrane subunit Smed_2849 2976899 - 2975619 - | FAD dependent oxidoreductase Smed_2850 2977793 - 2976966 - | extracellular solute-binding protein TERM 2514 2978115 - 2978087 - R 100 -17.3 -3.92869 | overlap 2978071 GGAGCGATGCAGAAA GCGGAGCCCCGGC TTC GCCGGCGCACCGC TCGCACGGGATAAAC Smed_2851 2979092 - 2978142 - | xylose isomerase domain-containing protein Smed_2852 2979892 - 2979125 - | glycerophosphoryl diester phosphodiesterase Smed_2853 2980780 - 2979899 - | binding-protein-dependent transport systems inner membrane component TERM 2515 2980907 - 2980857 - R 91 -6.8 -5.20328 | opp_overlap 2980866 2980870, overlap 2980870 TTGCAAAAAAACAAA CGGGTTGGAGAAATTCCGCGATTC GGG GAAAAGCGGAATTGCTCTAATGCG CGGCATGCGAACGCA Smed_2854 2981826 - 2980900 - | binding-protein-dependent transport systems inner membrane component Smed_2855 2982821 - 2981823 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Smed_2856 2983834 - 2982818 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 2516 2983909 - 2983884 - R 100 -16.9 -4.07568 | opp_overlap 2983882 2983904, overlap 2983885 GGCCGGCCCTGAAAA CTCCGGCAGCC CACC GGCTGCCGGAA ACTGGGTTATTCGAT TERM 2517 2983908 - 2983885 - R 100 -18.2 -3.04398 | opp_overlap 2983882 2983904, overlap 2983884 GCCGGCCCTGAAAAC TCCGGCAGCC CACC GGCTGCCGGA AACTGGGTTATTCGA Smed_2857 2985554 - 2983926 - | extracellular solute-binding protein Smed_2858 2985871 - 2986803 + | DeoR family transcriptional regulator Smed_2859 2987283 - 2986873 - | PilT domain-containing protein Smed_2860 2988299 - 2987370 - | integrase catalytic region Smed_2861 2988559 - 2988293 - | transposase IS3/IS911 family protein Smed_2862 2988979 - 2988713 - | hypothetical protein TERM 2518 2989029 - 2989014 - R 100 -11.8 -4.6902 | opp_overlap 2989014 TCAGAAGCGCAAAAA GCCCCC GTAT GGGGGC TTTTTTGCTTGGCGT TERM 2519 2989014 - 2989029 + r 100 -11.8 -5.27477 | opp_overlap 2989014 TCAGAAGCGCAAAAA GCCCCC GTAT GGGGGC TTTTTTGCTTGGCGT TERM 2520 2989348 - 2989368 + r 95 -14.1 -3.64703 | opp_overlap 2989340 2989348 CGGCAAAGCGCAAGA TTTGCTCCC GGC GGGAGCAAA TTTCAATCGAGAAGC TERM 2521 2989368 - 2989348 - R 83 -14.1 -3.12668 | opp_overlap 2989348, overlap 2989340 CGGCAAAGCGCAAGA TTTGCTCCC GGC GGGAGCAAA TTTCAATCGAGAAGC TERM 2522 2989388 - 2989402 + r 83 -5 -5.07652 | AATCGAGAAGCTGGT GAAGTT TTT GACTTC TTTTGTTTTGAACAC TERM 2523 2990648 - 2990661 + r 76 -4.5 -4.7254 | GTCGTCTTGCGACTT CGCAG AGCC CTGTG TTTTTGATAAACAGT TERM 2524 2991036 - 2991052 + r 71 -8 -4.08546 | overlap 2991031 2991030 TTGGTCTTTCGGCGA GAGGGT CTCTC ACCCTC TTTATCGTTACTCAT TERM 2525 2992590 - 2992568 - R 70 -4.1 -4.62783 | CAGCCAGCCCAAAAA CCCGGTTAC CTTTT ACAACCGAG CCAATCAGATGCCAT TERM 2526 2995488 - 2995472 - R 86 -5.2 -5.10029 | ACCAATTTCAAAAAA TTACGA GAAAA TCGTAA GTGGCTGTTTTTGAA Smed_2863 2996564 - 2995617 - | LysR family transcriptional regulator TERM 2527 2995915 - 2995929 + g 70 -12.8 -2.90075 | opp_overlap 2995913 2995912 GAGCTTTGGAAATGG GCCCGG AGC CCGGGC TGTAATTCACCGAGA Smed_2864 2996806 - 2998011 + | putative periplasmic binding ABC transporter protein TERM 2528 2998083 - 2998053 - g 72 -11.8 -3.33696 | gap 1 CCTCTGGTGAACGAA GCGCCGCGGGTGG TCCTCT CCGCCCGCGG-GC TGCGCCGCGACTTCG Smed_2865 2998023 - 2998808 + | ABC transporter related Smed_2866 2998808 - 2999509 + | ABC transporter related Smed_2867 2999513 - 3000400 + | inner-membrane translocator Smed_2868 3000402 - 3001394 + | inner-membrane translocator TERM 2529 3001434 - 3001417 - f 70 -2.5 -4.79223 | opp_overlap 3001417, overlap 3001410 3001418 CGAGATGAGGAAAAA TGTGCGG TTTT CCGCCCG TATTCCGCTCTCACT Smed_2869 3001539 - 3003134 + | glucose-methanol-choline oxidoreductase metH 3006953 - 3003180 - | B12-dependent methionine synthase TERM 2530 3005179 - 3005165 - G 77 -2.7 -4.9792 | opp_overlap 3005176, overlap 3005166 CATGGTAGAGAAAAA CGGCG TGCAT CGCCT CGCGCACGGGCTCGT TERM 2531 3007087 - 3007061 - R 100 -18 -4.14243 | GACCGGACGGCAAAA CGGCCCGCCG GCGTGTG CGGCGGGCCG TTCAAAAGCGGGACG Smed_2871 3008281 - 3007133 - | mannose-6-phosphate isomerase TERM 2532 3008074 - 3008043 - G 76 -9.4 -4.09243 | gap 1, overlap 3008045 TAGACGCGGTCAAAA TAGCGAA-GGCCGTC TTC GGCGGCCATCCGCCA GTCCCCGGTCCAGCC TERM 2533 3008072 - 3008045 - G 70 -9.8 -3.6422 | gap 1, overlap 3008043 GACGCGGTCAAAATA GCGAA-GGCCGTC TTC GGCGGCCATCCGC CAGTCCCCGGTCCAG Smed_2872 3008792 - 3008298 - | hypothetical protein Smed_2873 3009753 - 3008857 - | ROK family protein TERM 2534 3009037 - 3009024 - G 79 -8.1 -4.3534 | opp_overlap 3009023 3009021 CGCCAAGCACGAAAA CGTCG GGGT CGACG ATATTCGTCAAGAGC TERM 2535 3009907 - 3009921 + r 75 -5.6 -4.56358 | GCTGAAAAACACTTG GCGAAG AGG CTGCGC TTTTGTATGGGTCTA TERM 2536 3009986 - 3010021 + r 70 -2.4 -4.72986 | gap 1, opp_overlap 3009972 3009969 3009967 ACCAGATTCCTAATC TGGGGGTCGCGCGTTCG AAT CGCGC-CGGGATCACCA TTTTTCCTGACGATA Smed_2874 3010440 - 3010234 - | cold-shock DNA-binding domain-containing protein Smed_2875 3010883 - 3010605 - | hypothetical protein Smed_2876 3011121 - 3011489 + | PRC-barrel domain-containing protein Smed_2877 3011815 - 3011621 - | putative transmembrane protein Smed_2878 3012651 - 3011926 - | protein of unknown function DUF306 Meta and HslJ Smed_2879 3012811 - 3013986 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Smed_2880 3015335 - 3014115 - | 5-aminolevulinate synthase TERM 2537 3015637 - 3015654 + r 91 -8.3 -5.14563 | opp_overlap 3015637 GCAGCGGCGCAAAAA GGACGGC CACG GCCGCCC TTTTTTGATACCAAA TERM 2538 3015654 - 3015637 - R 90 -10.5 -4.57569 | opp_overlap 3015637 GCAGCGGCGCAAAAA GGACGGC CACG GCCGCCC TTTTTTGATACCAAA Smed_2881 3016475 - 3015678 - | carbon-monoxide dehydrogenase (acceptor) Smed_2882 3018836 - 3016491 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 2539 3018913 - 3018893 - R 87 -8.2 -4.81083 | CGGAATGACGAAAAA TGCGGCGG CGCTC CCCCCGCA TCGCGCTCCCTCAGG TERM 2540 3018920 - 3018930 + r 74 -6.8 -4.3255 | CCCCCCGCATCGCGC TCCC TCA GGGA TTTCTTCATTCGGCA Smed_2883 3019424 - 3018936 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 2541 3019390 - 3019408 + g 76 -8.8 -4.20868 | CAAGTCCCGCTTACC TGACGGCC GTT GACCGTCA TTGTTATTTTCGCCA Smed_2884 3019690 - 3020100 + | 17 kDa surface antigen TERM 2542 3020159 - 3020109 - T 71 -11.1 -3.18264 | gap 1, overlap 3020123 3020154 CTGCTGATCGAGCAA CGGCAGGGATC-ACAGGCCCCGGA AGGA TCCGGGGCCTGTCGAACACTGGAA ACCTCGAGATCACGA TERM 2543 3020144 - 3020123 - T 89 -17.3 -2.80935 | overlap 3020109 ACGGCAGGGATCACA GGCCCCGGA AGGA TCCGGGGCC TGTCGAACACTGGAA TERM 2544 3020212 - 3020161 - T 81 -11.9 -3.66803 | gap 2, opp_overlap 3020161 3020169, overlap 3020154 3020162 3020172 GTCGAACACTGGAAA CCTCGAGATCACGATGTTTCAGGTC AATC GACCTGAAACATCGTGAT--CGATT CAAAAGATTTGGGCC TERM 2545 3020211 - 3020162 - T 83 -15.4 -2.7976 | gap 2, opp_overlap 3020161 3020169, overlap 3020154 3020161 3020172 TCGAACACTGGAAAC CTCGAGATCACGATGTTTCAGGTC AATC GACCTGAAACATCGTGAT--CGAT TCAAAAGATTTGGGC TERM 2546 3020169 - 3020206 + T 100 -24.5 -2.52795 | opp_overlap 3020154 3020162 3020161 3020172, overlap 3020161 CTGGAAACCTCGAGA TCACGATGTTTCAGGTC AATC GACCTGAAACATCGTGA TCGATTCAAAAGATT TERM 2547 3020203 - 3020172 - T 100 -20.4 -2.64107 | opp_overlap 3020169 3020161, overlap 3020154 3020162 3020161 GAAACCTCGAGATCA CGATGTTTCAGGTC AATC GACCTGAAACATCG TGATCGATTCAAAAG Smed_2885 3022038 - 3020272 - | adenylyl cyclase class-3/4/guanylyl cyclase Smed_2886 3022256 - 3023128 + | alpha/beta hydrolase fold TERM 2548 3023165 - 3023207 + F 79 -12.8 -3.37975 | overlap 3023166 GCTGGCTTCCCGCCC TTACGAGGTTTGCGCTTATG CTG CATAAGCGCAAACTTCGGCC TTGTGCCTGATGCAT TERM 2549 3023166 - 3023206 + F 84 -16.3 -2.62463 | overlap 3023165 CTGGCTTCCCGCCCT TACGAGGTTTGCGCTTATG CTG CATAAGCGCAAACTTCGGC CTTGTGCCTGATGCA TERM 2550 3025094 - 3025113 + G 71 -5 -4.51196 | opp_overlap 3025103, overlap 3025096 CGCATCGGCGTCACC GATACGAT AGGC ATCGTACC TTTTGTCGATTTCGG Smed_2887 3023390 - 3025303 + | surface antigen (D15) TERM 2551 3027418 - 3027407 - g 70 -7.2 -4.08692 | overlap 3027395 CAAGGTCGGCGAAAA CCGG CTGA CCGG GGCGATTGACCTGAC TERM 2552 3029512 - 3029485 - g 73 -12.8 -3.13403 | gap 1, overlap 3029483 CCGCGCTGATCAACA CCTT-CGCCCCGA CGC TCGGAGCGGAAGG CACGATCGCCGGTAC Smed_2888 3025440 - 3031049 + | hypothetical protein Smed_2889 3031653 - 3031174 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2553 3031506 - 3031476 - G 72 -7.6 -4.11216 | gap 1, overlap 3031477 3031496 CGGCCACCCGGAAAA CCGAGTCGCCGAT GGAGAG ATCGGCG-CTCGT CAGAATGCCGCTCCA TERM 2554 3031578 - 3031606 + g 76 -10.4 -3.88787 | AGAACGCAATCGCCC GCTCTTCGTC CCCATGCCT GACGAAGAGC TTTATGCAGATCTGA Smed_2890 3032290 - 3031856 - | AsnC family transcriptional regulator Smed_2891 3032444 - 3033367 + | arginase Smed_2892 3033587 - 3034066 + | putative CheW protein TERM 2555 3035295 - 3035285 - g 78 -6.8 -4.56597 | CCTCGTCGTCAAAAA CGCT ATC AGCG CCATGGATCAGATCG Smed_2893 3034164 - 3035933 + | methyl-accepting chemotaxis sensory transducer Smed_2894 3036942 - 3036010 - | transposase IS116/IS110/IS902 family protein Smed_2895 3037460 - 3037230 - | putative NAD-dependent formate dehydrogenase delta subunit protein Smed_2896 3038386 - 3037478 - | formate dehydrogenase accessory protein Smed_2897 3041274 - 3038395 - | formate dehydrogenase, alpha subunit Smed_2898 3042913 - 3041357 - | NADH dehydrogenase (quinone) TERM 2556 3042716 - 3042744 + g 81 -12.3 -3.84451 | opp_overlap 3042695 3042692, overlap 3042727 GTCGCCCGCTTTCAC CGGCCCGTAGGCG ACG CGCCCATCGGCCG TTTCGATTTCGACCA Smed_2899 3043389 - 3042910 - | formate dehydrogenase subunit gamma TERM 2557 3042998 - 3042969 - G 95 -20.1 -3.14564 | gap 1 CGAGCCGCGCATGAA GCTCGCCGTCGAGC ATC GC-CGACGGCGAGC AGGAACAGAGCCCAA Smed_2900 3044462 - 3043566 - | LysR family transcriptional regulator Smed_2901 3045322 - 3044552 - | short-chain dehydrogenase/reductase SDR TERM 2558 3045938 - 3045972 + G 78 -12.2 -3.73072 | gap 1 GGGGTCGTACGCGGT TCGGACGGCGGCATC GTCGGG GAGGCCGCCGTC-GA TTTCATCAAGCAGTT Smed_2902 3045500 - 3046264 + | DeoR family transcriptional regulator TERM 2559 3047907 - 3047873 - g 73 -12.9 -3.15574 | gap 1, overlap 3047871 GGAACTGGAGGAATA TATC-CGGGCAGCGGC CAAC GCCGCCGCCTGAGATA CCACGGCTGAACCGC glpD 3046392 - 3047903 + | glycerol-3-phosphate dehydrogenase Smed_2904 3047945 - 3049015 + | ABC transporter related TERM 2560 3049808 - 3049778 - g 76 -14 -3.14132 | CTCTCCGGGCATGAA CGTGTTGCCGGC CGAGATC GCCGGCAGCACG GCCTCCATCGGCGAC TERM 2561 3049842 - 3049895 + G 74 -13.1 -3.2794 | AGGATCGCGCTGGAT TTCCGGCCTGAGGTCAAGGCCGG CACGAAGA CCGAGCTTGGCATCCGGCCGGAA TTCATCTCGCTCGGC Smed_2905 3049038 - 3050108 + | ABC transporter related Smed_2906 3050110 - 3050976 + | binding-protein-dependent transport systems inner membrane component TERM 2562 3051557 - 3051596 + G 78 -3.4 -4.99861 | gap 1, overlap 3051558 3051559 CTTTTTCGTGAAGAT CTTCGTGCCGCTGATCGCC TCC GGC-ATCGGCGTCGCGGCC TTTTTCTGCTTCATG Smed_2907 3050997 - 3051821 + | binding-protein-dependent transport systems inner membrane component Smed_2908 3051835 - 3052254 + | hypothetical protein TERM 2563 3052268 - 3052288 + F 71 -7.5 -4.13767 | opp_overlap 3052264 3052268 GAGGAATGGAATGAA GGGCGCT CCCCACA GGCGCCC TTTTAGACTGCAAGG TERM 2564 3052667 - 3052656 - g 76 -5.8 -4.57073 | GACGTTGTCGAAAAA CTGC AGAC GCAG ATGCAGTCGGGCGAA TERM 2565 3053211 - 3053189 - g 71 -6.2 -4.2679 | CAAGGTCGACGAAAA CTCAAGACCC GTC GGATCCTGCG TTGCACGCGGCGGCG Smed_2909 3052335 - 3054059 + | extracellular solute-binding protein TERM 2566 3054065 - 3054094 + F 70 -12 -2.71924 | opp_overlap 3054056, overlap 3054064 GACCAACTGATTGAC ATGCGCCGCCCG ATCCGA CGGGCGGCGCCG CTTTCCGGGGAGATG TERM 2567 3054116 - 3054135 + F 100 -15 -5.4505 | GGGGAGATGCGGTAC CGGGGCTG GAAA CAGCCCCG TTTTTTATTCCGAAA TERM 2568 3055858 - 3055826 - f 83 -13.6 -3.55622 | gap 2 GTCAACTGGCGCAAA CG-CGATCCGGAC-CT CTG AGCGTCCGGATCGGCG GCGCGCCGATTACGC TERM 2569 3055897 - 3055881 - f 71 -7.3 -4.10161 | opp_overlap 3055881 3055882, overlap 3055882 GATTACGCCGGAAAA CCGGAAA GTG TTTCCGA TTCTCCCTCCCTTGC TERM 2570 3056572 - 3056535 - g 71 -9 -3.75153 | overlap 3056537 CTGGCGGAATTGAAA CAGCTCGCCACGGCAG GCGGAT CTGCCGTGCCGGACGG GCTCGTCCTCGGTGC Smed_2911 3055977 - 3057461 + | uracil-xanthine permease TERM 2571 3057505 - 3057467 - f 100 -26.2 -3.76224 | opp_overlap 3057473, overlap 3057468 3057470 CGGGCATTGATCAAA GGACAATCTCCCGTGGCC CAG GGCCACGGGAGATTGTCA CACTTCGATCGGCAC TERM 2572 3057504 - 3057468 - f 100 -29.7 -2.8552 | opp_overlap 3057473, overlap 3057467 3057470 GGGCATTGATCAAAG GACAATCTCCCGTGGCC CAG GGCCACGGGAGATTGTC ACACTTCGATCGGCA TERM 2573 3057502 - 3057470 - f 100 -26.5 -2.97667 | opp_overlap 3057473, overlap 3057468 3057467 GCATTGATCAAAGGA CAATCTCCCGTGGCC CAG GGCCACGGGAGATTG TCACACTTCGATCGG TERM 2574 3057473 - 3057499 + F 100 -22.4 -3.3344 | opp_overlap 3057470 3057468 3057467 TTGATCAAAGGACAA TCTCCCGTGGCC CAG GGCCACGGGAGA TTGTCACACTTCGAT Smed_2912 3057589 - 3058494 + | hypothetical protein Smed_2913 3058928 - 3058500 - | ferric uptake regulator family protein Smed_2914 3059050 - 3059955 + | periplasmic solute binding protein TERM 2575 3060544 - 3060526 - g 72 -7.4 -4.13767 | opp_overlap 3060534, overlap 3060527 GGGTCGACGTGAAAA CGGAGGAT GCG ATCATCCG CCTGCTCGTCGCGCT Smed_2915 3059952 - 3060887 + | ABC transporter related Smed_2916 3060884 - 3061741 + | ABC-3 protein Smed_2917 3061738 - 3062595 + | ABC-3 protein Smed_2918 3062723 - 3063568 + | hypothetical protein Smed_2919 3064044 - 3063580 - | AsnC family transcriptional regulator TERM 2576 3064013 - 3064054 + g 85 -14.5 -3.59262 | gap 1 TCGGTTACCTGCATA TCGTCGGCTTTCG-TCGGCG AAT TGCCGAACATAAGCCGACGA TTTAGCCATATCGAA Smed_2920 3064138 - 3065241 + | saccharopine dehydrogenase TERM 2577 3065268 - 3065288 + T 100 -14.7 -4.90266 | opp_overlap 3065262 3065265 GGTCGAGAACCAGCA TGCCCGGGC CTT GTCCGGGCA TTTTTCGTTCCTGCC TERM 2578 3065470 - 3065454 - T 100 -10.8 -5.04601 | opp_overlap 3065454 TCCAGAAACGAAAAA CCCCGC TCGAG GCGGGG TTGGATAGGCATTAT atpC 3065910 - 3065506 - | F0F1 ATP synthase subunit epsilon Smed_2922 3067562 - 3066033 - | F0F1 ATP synthase subunit beta Smed_2923 3068462 - 3067587 - | F0F1 ATP synthase subunit gamma Smed_2924 3070019 - 3068490 - | F0F1 ATP synthase subunit alpha Smed_2925 3070585 - 3070019 - | F0F1 ATP synthase subunit delta Smed_2926 3071209 - 3070823 - | hypothetical protein Smed_2927 3073536 - 3071332 - | primosome assembly protein PriA TERM 2579 3072489 - 3072514 + g 82 -14.7 -3.28712 | opp_overlap 3072477 3072476 AATTGCCGATGCGCC CGCGCACGACA GCCA TGTCGCGCGCG TTGTAGAAAACGCGG TERM 2580 3073223 - 3073187 - G 73 -11.5 -3.64703 | gap 1 GGCTCCGGATCGAAA GCCGCAGGCGCCCGCA GGGCCA TGCGGGCGAC-GAGGC CTGGCGGCGTCAGCG TERM 2581 3073284 - 3073321 + g 70 -10.5 -3.65046 | opp_overlap 3073265 GCATCTCGGGGCTGA GCGGCGGGCAATCGAAG ACCT TTTCGATCGCCCTCAGC TTCTTCGGGTCGACG TERM 2582 3073413 - 3073379 - G 71 -9.1 -3.78953 | ACGCCGACGACGAAA CGGGGGCCGAGCGGC ACTTG GACGATCGACCCCGG CTCGACCGCCATGCC TERM 2583 3073585 - 3073575 - H 76 -3.2 -4.90778 | overlap 3073576 3073577 TTCAGTTAAAGAAAA CTCG CAG CGAA CCGCTGCCTTGCAGA TERM 2584 3074285 - 3074231 - g 72 -12 -3.36557 | gap 1, overlap 3074232 AACCACGTCAAGGAA GCCGCGCTCATCGGCGCCGACGTCG TCACCG CGCCGCCGGCGACGCTGAAGGCG-C TGGTCAAGCACCCGC Smed_2928 3073712 - 3074365 + | putative translaldolase TERM 2585 3074394 - 3074413 + T 95 -11.4 -4.84527 | GGCAGATTTTTAAGG GCCTCGCA GCAA TGCGGGGC TTTTTCGTCTGTACG Smed_2929 3075906 - 3074440 - | hypothetical protein TERM 2586 3074635 - 3074625 - G 74 -2.4 -4.82901 | CCCCGTGGAGAAAAA CGGC ACG GCAG CCTGGCACGGGAAAT Smed_2930 3076102 - 3077169 + | hypothetical protein Smed_2931 3078378 - 3077230 - | hypothetical protein Smed_2932 3079359 - 3078445 - | phospholipid/glycerol acyltransferase TERM 2587 3079486 - 3079462 - H 70 -2.7 -4.7373 | overlap 3079467 GCATGTTAGCAAAAA CATAAGACGCC GAT GGCATCCTCGG AAGCTGAAACAAGTG TERM 2588 3079481 - 3079467 - H 74 -7.8 -4.11027 | overlap 3079462 TTAGCAAAAACATAA GACGCC GAT GGCATC CTCGGAAGCTGAAAC xerC 3079559 - 3080500 + | site-specific tyrosine recombinase XerC Smed_2934 3080586 - 3081677 + | GumN family protein Smed_2935 3082155 - 3081661 - | hypothetical protein Smed_2936 3083691 - 3082285 - | dihydrolipoamide dehydrogenase Smed_2937 3084494 - 3083742 - | short-chain dehydrogenase/reductase SDR Smed_2938 3084991 - 3084491 - | putative signal peptide protein Smed_2939 3085635 - 3084991 - | lysine exporter protein LysE/YggA TERM 2589 3085291 - 3085264 - G 70 -9.8 -3.53811 | CGCATTGGCGGCAAA GCCGAGGCCGAA GGCC TTCAGCGCCGGC TGCTGCGTGGGGGCT TERM 2590 3085792 - 3085774 - R 84 -13.1 -3.70902 | opp_overlap 3085772 3085784 CGGCGGAGATGGAAA CGGGGGC ACGTG GCCCCCG CCATTCCTTAGAGAT Smed_2940 3087047 - 3085800 - | dihydrolipoamide acetyltransferase TERM 2591 3086758 - 3086768 + g 81 -2.4 -5.24129 | overlap 3086738 GCCGGAGCAGCCGCA ACCG GTT CGGG TTTTTTCTCGGCCGC kgd 3090093 - 3087097 - | alpha-ketoglutarate decarboxylase Smed_2942 3091276 - 3090374 - | succinyl-CoA synthetase subunit alpha TERM 2592 3090534 - 3090578 + g 100 -20.2 -3.98113 | gap 2, opp_overlap 3090551 CGGCCGGGAGGCGCC GTGCGGCCTGCGATGAAGCCGA CCA TCGGCTTC-TTGC-GGCCGCGC TTTGCTTCATCCTTC sucC 3092479 - 3091283 - | succinyl-CoA synthetase subunit beta Smed_2944 3093475 - 3092513 - | malate dehydrogenase TERM 2593 3093060 - 3093079 + g 71 -8.6 -3.85698 | ATGCCGACGACCTTG TTCTTCGG CAGC CCGGAGAA TTTCTGCAACGCCCA TERM 2594 3093622 - 3093641 + r 76 -5 -4.8048 | opp_overlap 3093622, overlap 3093624 GGTTAGATCGTAAAA TTCTTACG TAAA CGTAAGTA TTTTTGCTGTCCGGC TERM 2595 3093624 - 3093639 + r 71 -7.6 -4.02302 | opp_overlap 3093622, overlap 3093622 TTAGATCGTAAAATT CTTACG TAAA CGTAAG TATTTTTGCTGTCCG Smed_2945 3094888 - 3093659 - | AFG1 family ATPase TERM 2596 3094047 - 3094061 + g 77 -12.8 -3.63068 | TTGCGGCCGATCTCG GCCGGG GAG CCCGGC TTTCCGCTCGTCTCC TERM 2597 3094249 - 3094234 - G 71 -4.6 -4.45664 | TGAATGGAAGGAAAA GACCCC GATT GAGGCC GTCGCGATAGAGATT TERM 2598 3094864 - 3094896 + g 74 -13.3 -3.28712 | opp_overlap 3094850, overlap 3094866 AGGATGGCGGCCGCG GCGGCGGAAGGCGCC CGT GCCGCATTCCGCCTC TTGTCCGGCCGCGAG TERM 2599 3094866 - 3094894 + g 80 -14.5 -3.21276 | opp_overlap 3094850, overlap 3094864 GATGGCGGCCGCGGC GGCGGAAGGCGCC CGT GCCGCATTCCGCC TCTTGTCCGGCCGCG Smed_2946 3095470 - 3094931 - | outer membrane lipoprotein omp19 Smed_2947 3096709 - 3095639 - | ABC transporter related Smed_2948 3097598 - 3096750 - | binding-protein-dependent transport systems inner membrane component TERM 2600 3096834 - 3096810 - G 86 -7.2 -4.72272 | gap 1 CTGGGCGAGGAAAAA GACGATCACCG TCGG CAG-GATCGTC AGCGTGATGAAAGCG Smed_2949 3098499 - 3097591 - | binding-protein-dependent transport systems inner membrane component TERM 2601 3097830 - 3097812 - G 74 -5.2 -4.64676 | TGACGGCGAAGAAAA TCGACAGC CTG ACGGTCGA GCCAAGGAGCGGCAA TERM 2602 3098079 - 3098044 - G 81 -12.4 -3.9392 | opp_overlap 3098055 GGCCACGCCAAAGAA GCCGGCGACCGCGGCC ACGA GGCCGTAGTCTCCGTC ATAGACGAAGCGCCA TERM 2603 3098590 - 3098568 - R 100 -18.4 -4.16016 | opp_overlap 3098569, overlap 3098569 GGATCGTCGAAGAAA GGCGGGCGGC GGG GCCACCCGCC GCCGCGCTTTCGCAC TERM 2604 3098569 - 3098597 + r 100 -19.6 -3.59315 | gap 1, opp_overlap 3098568 3098569 GATCGTCGAAGAAAG GCG-GGCGGCGGG GCCA CCCGCCGCCGCGC TTTCGCACTCATTCC TERM 2605 3098597 - 3098569 - R 100 -19.6 -3.09288 | gap 1, opp_overlap 3098569, overlap 3098568 GATCGTCGAAGAAAG GCG-GGCGGCGGG GCCA CCCGCCGCCGCGC TTTCGCACTCATTCC Smed_2950 3099913 - 3098606 - | extracellular solute-binding protein TERM 2606 3098947 - 3099002 + g 84 -15.3 -3.32844 | opp_overlap 3098997, overlap 3098949 TGAGGCCTCCGAGCG TATCGGTCGCCGCACCTGCCCCGCC CTCGAC GGCCGGGAAGGGGAAGCGACCGATG TTCTCGGGTGCCAGG TERM 2607 3098949 - 3099000 + g 83 -15.7 -3.23393 | opp_overlap 3098997, overlap 3098947 AGGCCTCCGAGCGTA TCGGTCGCCGCACCTGCCCCGCC CTCGAC GGCCGGGAAGGGGAAGCGACCGA TGTTCTCGGGTGCCA TERM 2608 3099698 - 3099723 + g 76 -9.8 -3.84246 | TTCCAGGAATTGGAG CTGAACATCC ACGCCG GGATGTTCGG TTTCGTACTTGGCGG TERM 2609 3100510 - 3100544 + G 73 -11.4 -3.64703 | gap 1 TGCCGACCTGATCGA GGACGGCGTGCGGCG CTGCGT CGTCG-ACGCCGACC TTTCCCTCGACGACA TERM 2610 3101119 - 3101144 + G 76 -7.6 -4.25104 | gap 1 ACGGGTCGTCATCGT CGGT-TCGAGC CTGTC GCTCGGCACCG TTTTCGTGGAGAGCA Smed_2951 3100121 - 3101326 + | ROK family protein TERM 2611 3101728 - 3101705 - g 76 -9.4 -4.07687 | ACTGGCCCGGGAAAA GGGCCTGCGC ATCG GCGCCGCCCC GGACACATTTCTCGG Smed_2952 3101367 - 3102467 + | oxidoreductase domain-containing protein Smed_2953 3102488 - 3103129 + | hypothetical protein TERM 2612 3103120 - 3103170 + T 85 -15.3 -3.14132 | gap 1 CGGCGCGAACTGGGC GGCGCGCTGAGGCCTCTCCGCCTG GCGA CTGGCGGAGAGGCCA-GCCGCGAC TTCGTCGAGCGGCGC TERM 2613 3103205 - 3103222 + T 80 -14.1 -2.72344 | GAGCATGCTGGATGT CGCCGCC GTTA GGCGGCG TCGTTGCCGCTGAAC Smed_2954 3103556 - 3103290 - | hypothetical protein Smed_2955 3104255 - 3103659 - | peptide methionine sulfoxide reductase TERM 2614 3104368 - 3104349 - R 91 -12.8 -4.07246 | GGACGTGAAAGCAAA CGGCGAGC CAAG GCCCGCCG TTGAAATGCTGCTGA sdhB 3105184 - 3104405 - | succinate dehydrogenase iron-sulfur subunit TERM 2615 3104707 - 3104686 - G 74 -9.5 -3.93583 | gap 1, opp_overlap 3104686 3104678 GAATGCACTCATAAA GACCGTC-GA GTT TCAGACGGTC TTCGTGGCTTTGCCG sdhA 3107044 - 3105203 - | succinate dehydrogenase flavoprotein subunit TERM 2616 3105859 - 3105881 + g 74 -12.6 -3.39327 | overlap 3105860 CGCCGACGGCCATCA GCCCGGGCGC GAT GCGCTCGGGG TTCTGGCTGTCCGCG TERM 2617 3105860 - 3105880 + g 80 -16.1 -2.63382 | overlap 3105859 GCCGACGGCCATCAG CCCGGGCGC GAT GCGCTCGGG GTTCTGGCTGTCCGC Smed_2958 3107432 - 3107052 - | succinate dehydrogenase hydrophobic membrane anchor Smed_2959 3107836 - 3107444 - | succinate dehydrogenase cytochrome b556 subunit TERM 2618 3107508 - 3107534 + g 76 -7.3 -4.26076 | gap 1, overlap 3107510 GATGCGACGATCATC GC-CTTCGCCAC CCGG GTCGCGAAGTGC TTTTCGTAGCCATAG Smed_2960 3108137 - 3108757 + | hypothetical protein Smed_2961 3109443 - 3108787 - | hypothetical protein TERM 2619 3109271 - 3109250 - G 74 -9.3 -3.85704 | TGATCAAGGATGAAA CGTGCGAGC CCCT GCCCGCCCG CCCAGGCAAAGGCCC Smed_2962 3109888 - 3109457 - | hypothetical protein Smed_2963 3110188 - 3109895 - | YciI-like protein Smed_2964 3111200 - 3110205 - | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 2620 3111174 - 3111186 + g 82 -5.5 -4.90136 | overlap 3111154 GACCACGATCTTTGG TCCGG TCT TCGGA TTTTTCATCTTCATT Smed_2965 3112287 - 3111205 - | O-sialoglycoprotein endopeptidase hemC 3112412 - 3113404 + | porphobilinogen deaminase Smed_2967 3113520 - 3114236 + | uroporphyrinogen-III synthase TERM 2621 3114261 - 3114245 - f 72 -9.3 -3.68302 | overlap 3114246 CGAATAGGCGAAGAA CCCGGCG GTT CGCCGGC TGGACGGACGTAACT TERM 2622 3114260 - 3114246 - f 73 -12.8 -2.80499 | overlap 3114245 GAATAGGCGAAGAAC CCGGCG GTT CGCCGG CTGGACGGACGTAAC TERM 2623 3114577 - 3114542 - g 73 -6.6 -4.38712 | overlap 3114562 TCGAGGCGGAGAAAA CCGCGTCCGCGCAGAC CGAA GCCACCGCTGACGGGG AAGCCGCACCCAGCC TERM 2624 3114754 - 3114716 - g 74 -9.4 -3.92592 | opp_overlap 3114721 ATCCGCAAGAGGAAA CGGAAGAGGCACGGGCAG ATG CCGCCGCTGCCGCTTTCG ACGAGAAGCTTCCGC TERM 2625 3115234 - 3115224 - g 78 -6.8 -4.64676 | overlap 3115233 CCAGGCGGAACAAAA GCTC AAC GAGC CGGCAAACGACATCG Smed_2968 3114373 - 3115761 + | hypothetical protein Smed_2969 3115874 - 3117529 + | HemY domain-containing protein Smed_2970 3117555 - 3118034 + | hypothetical protein Smed_2971 3118037 - 3118783 + | glutamine amidotransferase Smed_2972 3120189 - 3118942 - | major facilitator transporter TERM 2626 3120332 - 3120318 - H 80 -9.2 -4.20918 | GGGAAGGGGAAGAAA GACGCG CTC CGCGCC ATTAAACATGATCGC Smed_2973 3120393 - 3120716 + | protein of unknown function YGGT TERM 2627 3120839 - 3120812 - T 100 -17.8 -5.83226 | opp_overlap 3120803 3120812 3120813, overlap 3120813 AACCCAACAAAAAAA CCCTCCGGATCG CGGC CGATCCGGAGGA TTATGAAGGTTCTTC TERM 2628 3120812 - 3120839 + T 87 -15.6 -3.34947 | opp_overlap 3120812 3120813, overlap 3120803 3120813 AACCCAACAAAAAAA CCCTCCGGATCG CGGC CGATCCGGAGGA TTATGAAGGTTCTTC TERM 2629 3120813 - 3120838 + T 95 -19.1 -2.60486 | opp_overlap 3120812 3120813, overlap 3120812 3120803 ACCCAACAAAAAAAC CCTCCGGATCG CGGC CGATCCGGAGG ATTATGAAGGTTCTT TERM 2630 3120838 - 3120813 - T 100 -19.1 -4.07495 | opp_overlap 3120813 3120812 3120803, overlap 3120812 ACCCAACAAAAAAAC CCTCCGGATCG CGGC CGATCCGGAGG ATTATGAAGGTTCTT Smed_2974 3121480 - 3120881 - | inorganic pyrophosphatase Smed_2975 3122399 - 3121893 - | GCN5-related N-acetyltransferase TERM 2631 3122556 - 3122573 + r 81 -12.7 -3.51924 | opp_overlap 3122556 CACACACAGCAAAAA CCCCGGA TCGC TCCGGGG TTCTGTAGATCGACG TERM 2632 3122573 - 3122556 - R 100 -12.7 -4.86133 | opp_overlap 3122556 CACACACAGCAAAAA CCCCGGA TCGC TCCGGGG TTCTGTAGATCGACG Smed_2976 3124439 - 3122613 - | GTP-binding protein TypA TERM 2633 3124477 - 3124487 + r 77 -8.2 -4.27316 | opp_overlap 3124476 GGCACGCGCAGCAAG GCGG GTA CCGC TTTTCAGTTGCCGCG TERM 2634 3124586 - 3124532 - R 72 -8.4 -3.87149 | gap 1, opp_overlap 3124534 3124542, overlap 3124526 TTCACGAAAGCGAAA GGGGCCGC-CGCGCAGAGCAGGCCT GCGTTT ACGCCTGCAATGCTCATGCGGCCGC TGCCGGGTCCAGCGT Smed_2977 3126137 - 3124575 - | alkaline phosphatase TERM 2635 3125959 - 3125936 - G 77 -13.1 -3.66646 | AATATTCGACGGAAA CGCGCGCCG GCCGAT CGACGCGCG TCCAGATCATGCCGG Smed_2978 3126980 - 3126291 - | GntR domain-containing protein Smed_2979 3127146 - 3127943 + | extracellular solute-binding protein Smed_2980 3128048 - 3128719 + | polar amino acid ABC transporter, inner membrane subunit Smed_2981 3128719 - 3129456 + | ABC transporter related TERM 2636 3129802 - 3129779 - g 71 -13.9 -2.57132 | overlap 3129778 GCGCTTCTCCAGAAC CTGGCTCGC GCCATG GCGAGCCAG CTTGCGCCGGGCGAC Smed_2982 3129485 - 3130762 + | cysteine desulfurase family protein Smed_2983 3130780 - 3132213 + | dihydropyrimidinase Smed_2984 3132426 - 3133733 + | amidase Smed_2985 3133899 - 3133738 - | hypothetical protein TERM 2637 3134423 - 3134407 - g 71 -10.8 -3.53012 | TGGCTCGCCTCCAAA GGCGCG CTGCC CGCGCC CGCCGCCACCTTCGC Smed_2986 3134179 - 3134685 + | hypothetical protein Smed_2987 3135440 - 3134784 - | hypothetical protein Smed_2988 3135635 - 3135766 + | hypothetical protein Smed_2989 3135916 - 3136494 + | isochorismatase hydrolase Smed_2990 3136592 - 3137005 + | hypothetical protein TERM 2638 3138095 - 3138119 + G 79 -15.7 -2.87132 | opp_overlap 3138095 GCGCTCCGTAAGGAA TCCGGCCGCTC CGC GAGCGGGCGGA TCTATACAAGAACCA TERM 2639 3138119 - 3138095 - g 84 -15.7 -3.33696 | opp_overlap 3138095 GCGCTCCGTAAGGAA TCCGGCCGCTC CGC GAGCGGGCGGA TCTATACAAGAACCA Smed_2991 3137036 - 3138295 + | PHB depolymerase family esterase Smed_2992 3139806 - 3138487 - | hypothetical protein Smed_2993 3143724 - 3139813 - | glycosyltransferase 36 TERM 2640 3141603 - 3141626 + g 82 -11 -4.08767 | opp_overlap 3141620 TCGACCTCGGAGGCT GGCTGGCG GCCGCAAA CGCCAGCC TTTTCGCGAAATCGC TERM 2641 3142669 - 3142684 + g 82 -3.2 -5.10461 | ATGAGACCAGAGCAC TCCCCT ATCC AGTGGA TTTTTCTTCAGTGCC Smed_2994 3144468 - 3143899 - | phosphoglycerate mutase Smed_2995 3146857 - 3144485 - | putative phosphoketolase TERM 2642 3144766 - 3144785 + g 85 -2.8 -5.26316 | gap 1, overlap 3144767 CCTCCTTGTAGCCGC GCACGTGCA GGT TGC-CGTGA TTTTTTCTGCGATAG TERM 2643 3145240 - 3145256 + g 81 -4.3 -5.06414 | opp_overlap 3145238 3145240, overlap 3145241 CCGGCGGCAGATAGA CGCGGAT CAC GTCCGCC TTTTTATTGACGACA TERM 2644 3145473 - 3145463 - G 71 -8.2 -3.85864 | overlap 3145442 GTAGCAGGAGAAGAA GCCG TGG CGGC CTGTCAGCAGATAGC Smed_2996 3148039 - 3147005 - | alcohol dehydrogenase Smed_2997 3148783 - 3148112 - | signal-transduction protein Smed_2998 3149178 - 3148852 - | hypothetical protein Smed_2999 3149283 - 3149546 + | hypothetical protein TERM 2645 3149726 - 3149738 + G 78 -10.5 -4.07568 | CCGAGATTTCAGGAC GCGGC ATC GCCGC TTTTGACGCAGCCAA Smed_3000 3149671 - 3150042 + | hypothetical protein TERM 2646 3150440 - 3150495 + G 86 -12.6 -4.08692 | gap 1, overlap 3150434 ACCCCCTGCCGCGTC GCCCGCCGATACGATTTCGAGCTGG GAGGCAG CCATC-CGCGATCGCATCGGTGGGC TTTTGGGCGCAGTTC TERM 2647 3152282 - 3152264 - g 74 -13.1 -3.27923 | GCTGAACATGAGCAA GGCCGCC GAGCT GGCGGCC AAGGCACCTGTCGCC Smed_3001 3150222 - 3152303 + | MscS mechanosensitive ion channel TERM 2648 3152651 - 3152633 - g 73 -3 -4.77567 | opp_overlap 3152636, overlap 3152634 AGTCCGATAATAAAA GGCCCG AACCCGG CGTGCC GGACGACTCGATCGA TERM 2649 3153609 - 3153627 + G 72 -7.3 -4.18494 | overlap 3153605 3153610 AATGCTGCTGGCGCC GGCGGCG TTCAT CGCCGCG TTTTCGATAGGAATC Smed_3002 3152611 - 3153867 + | hypothetical protein TERM 2650 3155198 - 3155172 - f 71 -8.1 -4.06182 | gap 2 CGACTGACAAAAAGA CGGC-CTT-GCCT TTG AGGCGAAGAGCCG GAACGAACATGAAAG rplU 3155222 - 3155596 + | 50S ribosomal protein L21 rpmA 3155630 - 3155899 + | 50S ribosomal protein L27 TERM 2651 3155943 - 3155918 - f 85 -11.2 -4.08767 | gap 1 GGTAGCGCTCTAAAA CAGCCGGCGTC TCATC GAC-CCGGCTG ACGCACCGCAAGGTT TERM 2652 3155976 - 3156003 + F 93 -12.7 -4.18401 | opp_overlap 3155976 AAGCCAGACTTCAAA GGGGAGATGGG GCGATA CCCAACTCCCC TTTTCGCATGTCTGG TERM 2653 3156003 - 3155976 - f 84 -12.7 -3.64371 | opp_overlap 3155976 AAGCCAGACTTCAAA GGGGAGATGGG GCGATA CCCAACTCCCC TTTTCGCATGTCTGG Smed_3007 3156011 - 3156676 + | GCN5-related N-acetyltransferase Smed_3008 3156673 - 3157275 + | GCN5-related N-acetyltransferase TERM 2654 3157289 - 3157314 + F 80 -10.4 -3.9712 | gap 1, opp_overlap 3157289 GACTTGCAGAAAGAA CCCCG-CCGGG CACGA CCTGGGCGGGG TTTGTCATACGATAA TERM 2655 3157314 - 3157289 - f 75 -8.9 -4.07133 | gap 1, opp_overlap 3157289 GACTTGCAGAAAGAA CCCCGCC-GGGC ACG ACCTGGGCGGGG TTTGTCATACGATAA TERM 2656 3157392 - 3157379 - f 76 -3.1 -4.90778 | GCGACCTAAAGAAAA CAGAT GGCG ATCCG ATGAAATTCCTCGAC TERM 2657 3157885 - 3157913 + G 73 -6.7 -4.3739 | GCCGATGCCGGCCTC GTCGGTCTGCC CAATGCC GGCAAATCGAC TTTTCTCGCCGCCTG obgE 3157393 - 3158403 + | GTPase ObgE TERM 2658 3159235 - 3159223 - g 74 -4.8 -4.58283 | TAACGGCCCGAAAAA CCTG GATCG CAGG GCAGCTTCTGCCGGC TERM 2659 3159488 - 3159450 - g 77 -2.2 -5.00884 | opp_overlap 3159451, overlap 3159451 ATCGCCGGCAAAAAA TCGGCTGAGATCGCCG TCATTCT CGGCTATGCCGGCCGC GCGGCCATGGTGCAC Smed_3010 3158406 - 3159587 + | gamma-glutamyl kinase TERM 2660 3159691 - 3159649 - g 74 -11.9 -3.53012 | gap 1, opp_overlap 3159666 3159684 GGGCGCCGCGCCAAA GCGGCCGCTCGGCCGCTCGC CGTT GCAAGCG-CCGAGCGCAAGC ATGCGGCACTTGTCG proA 3159580 - 3160863 + | gamma-glutamyl phosphate reductase TERM 2661 3161379 - 3161422 + G 79 -10.8 -3.90112 | gap 1, opp_overlap 3161379 GCTCGCGTCGACGAA GATCGCGCGGGCAGCCTGGCG TTG CGCCGCGC-GCCCGCCTGGAC TTTCATTCACGGACC nadD 3160878 - 3161486 + | nicotinic acid mononucleotide adenylyltransferase Smed_3013 3161588 - 3162088 + | iojap-like protein TERM 2662 3162564 - 3162547 - g 73 -11.3 -3.5944 | AGGGACAGCGGCAAA CGCGATC TCAT GATCGCG ATCGGCGGCGCAGAC Smed_3014 3162247 - 3162729 + | SPOUT methyltransferase superfamily protein TERM 2663 3163846 - 3163802 - g 76 -14.1 -3.11281 | overlap 3163798 3163800 CGATCGAAAACGAGA TCTCCTCCGTACGCGAGGCGG CTG CCGCCGCCCGTGCCGAGGAGG AGGAACGCCGCCGCA TERM 2664 3164344 - 3164320 - g 74 -5.6 -4.40358 | opp_overlap 3164322, overlap 3164322 3164330 ATTGAGTTCAGAAAA GACGGGAAAC CGGTT GATTCCCGAC CGTGGTGGACCGCAG Smed_3015 3162955 - 3164391 + | peptidase M23B TERM 2665 3164741 - 3164775 + G 76 -9.1 -4.06055 | gap 1, opp_overlap 3164727 3164724 3164742, overlap 3164742 AGCCCGATCGACGAC ACGCCCGCC-GCCCGC GCCG GCGTGCTGGCAGGCGA TTTCATTTCGAAGAT TERM 2666 3164742 - 3164774 + G 71 -12.6 -3.03151 | gap 1, opp_overlap 3164727 3164724 3164742, overlap 3164741 GCCCGATCGACGACA CGCCCGCC-GCCCGC GCCG GCGTGCTGGCAGGCG ATTTCATTTCGAAGA TERM 2667 3164774 - 3164742 - g 75 -14.8 -2.80816 | gap 1, opp_overlap 3164742 3164741, overlap 3164727 3164724 GCCCGATCGACGACA CGCCCGCC-GCCCGC GCCG GCGTGCTGGCAGGCG ATTTCATTTCGAAGA Smed_3016 3164381 - 3165703 + | carboxyl-terminal protease TERM 2668 3165754 - 3165725 - f 100 -15.7 -3.87373 | opp_overlap 3165727, overlap 3165727 GACAGGGCCGACAAA GAGGCGCCGGGCT GTTC AACCCGGCGCCTT TATATTATCCGTCGC TERM 2669 3165727 - 3165752 + F 100 -16.1 -4.28188 | opp_overlap 3165725 3165727 CAGGGCCGACAAAGA GGCGCCGGGCT GTTC AACCCGGCGCC TTTATATTATCCGTC TERM 2670 3165752 - 3165727 - f 100 -18.3 -3.5241 | opp_overlap 3165727, overlap 3165725 CAGGGCCGACAAAGA GGCGCCGGGCT GTTC AACCCGGCGCC TTTATATTATCCGTC Smed_3017 3165866 - 3167065 + | protein of unknown function DUF610 YibQ TERM 2671 3167122 - 3167176 + F 91 -17.9 -3.14132 | gap 1, opp_overlap 3167156 AGGTTTTCGTCAGGG CAGCGGCGATTGGCGAAGGTCGTACC CCAA GGTACGGCCGA-GACGATCGCCGCTG TTCCTGGCGGAAAGA Smed_3018 3167408 - 3167935 + | dinucleoside polyphosphate hydrolase TERM 2672 3167957 - 3167944 - T 79 -5.2 -4.77165 | overlap 3167945 GCGTTGAGAAGAAAA GGGC GGCACG GCCC CTCATCCGGCCACCG Smed_3019 3168561 - 3168076 - | bacterioferritin Smed_3020 3168838 - 3168527 - | hypothetical protein TERM 2673 3168700 - 3168715 + gr 78 -6 -4.66609 | opp_overlap 3168696 3168699, overlap 3168696 CGTTGGGAAAACAGC CGCAGC AACG GCCGCG TTTTTCCATCGCATG Smed_3021 3172433 - 3169083 - | DNA polymerase III, alpha subunit TERM 2674 3169268 - 3169252 - G 71 -11.5 -3.53012 | TCGTTGGCGCCGAAA CGCCGCG CCT CACGGCG CAGGAGGCCGAGCAT TERM 2675 3169734 - 3169724 - G 73 -8.2 -4.07568 | overlap 3169709 CCGCCCCCTCGAAAA GCGG CAA CCGC TCCACCGCCGATTGC TERM 2676 3172239 - 3172220 - G 91 -9.2 -4.57073 | TACCGTCGGCAAAAA CCAGACGG GCGC CCGGCTGG AAAGGATAGTTCTCC Smed_3022 3173845 - 3172430 - | hypothetical protein TERM 2677 3172864 - 3172845 - G 70 -10 -3.54475 | gap 1, opp_overlap 3172844 3172858, overlap 3172825 GCCTGCATCAGACAA TCCGGCCCG AAG CGGGC-GGA GACCTTGTCGACGAA TERM 2678 3172884 - 3172896 + g 71 -9.1 -3.72576 | opp_overlap 3172881 3172882, overlap 3172881 TTGTCGACGAAAGCC GCCAG CGG CTGGC TTTCGTCGGGAACGC TERM 2679 3172934 - 3172920 - G 76 -5.7 -4.59853 | GGAACGCCGGAAAAA TCCTG TTGCG CAGGA TCGAGCCTCTCGCTT Smed_3023 3174842 - 3173886 - | hypothetical protein TERM 2680 3174072 - 3174088 + g 86 -6.5 -5.00616 | overlap 3174075 AAGAAAGATGTCGTC GGAGGCT TGA AGCCTGC TTTTTTCGACAAGGA TERM 2681 3174258 - 3174201 - G 100 -13.4 -4.87318 | gap 2, overlap 3174193 3174202 CTGAAAACGGAAAAA GGCGCTGCTCGCCTCCTCCTCGCCCGCC TGGC GGAAGACGAGGAG-AGGCACGCCGC-CC GCCCGGGCCCTCACA TERM 2682 3174258 - 3174202 - G 79 -13.6 -3.51307 | gap 1, overlap 3174193 3174201 TGAAAACGGAAAAAG GCGCTGCTCGCCTCCTCCTCGCCCGCC TGGC GGAAGACGAGGAG-AGGCACGCCGCCC GCCCGGGCCCTCACA TERM 2683 3174592 - 3174548 - G 90 -17.8 -2.87132 | gap 1, opp_overlap 3174583, overlap 3174571 3174575 TCTGCCGCTGATAGA GCGCCGCAAGGGCCGCCA-CG AAAC CGACGGCGGCCCCCGCATCGC GGGTTTCCGCATTGC TERM 2684 3174583 - 3174595 + g 70 -10.5 -3.60792 | opp_overlap 3174548 3174571 3174575 AAACCGACGGCGGCC CCCGC ATC GCGGG TTTCCGCATTGCGAA Smed_3024 3175010 - 3175444 + | hypothetical protein Smed_3025 3175839 - 3175633 - | hypothetical protein Smed_3026 3176741 - 3175836 - | citrate (pro-3S)-lyase TERM 2685 3175865 - 3175882 + g 73 -6.9 -4.2717 | TTCGCTTTTCGATGA TCTCCGC CTTG GCGGCGA TTTTCATCGCCTGCT Smed_3027 3176884 - 3177138 + | hypothetical protein leuD 3177289 - 3177894 + | isopropylmalate isomerase small subunit Smed_3029 3177903 - 3178283 + | endoribonuclease L-PSP TERM 2686 3178321 - 3178332 + F 70 -2.2 -4.8622 | overlap 3178310 AAGGCCGCATCCAAG CGGT GCGA ATCG TTTTTCATTGACCGC TERM 2687 3178455 - 3178479 + F 100 -9.2 -5.88197 | ATAGATTTCCGAGGA CCGGTCGCGA TGGTT TCGCCGCCGG TTTTTTTGTATTTGA Smed_3030 3178464 - 3179435 + | homoserine O-succinyltransferase TERM 2688 3180380 - 3180414 + G 81 -13.7 -3.58726 | overlap 3180389 ACGTAGCCGTTCCCG GCCT-CGAAGGCCGCCG CTA CGGCG-CCTTTGCAGGC TTCTGTCTCGAAACA Smed_3031 3179518 - 3180534 + | aldose 1-epimerase Smed_3033 3182533 - 3181778 - | short-chain dehydrogenase/reductase SDR TERM 2689 3181881 - 3181902 + g 81 -7.3 -4.46212 | gap 1, opp_overlap 3181858, overlap 3181882 3181894 ACGACATCCTCGGGA TCGCCGATGC GAC GCAT-GGCGG TTTTGTCCTGCCAGC Smed_3034 3183317 - 3182547 - | short-chain dehydrogenase/reductase SDR TERM 2690 3182663 - 3182624 - G 81 -4.2 -5.06414 | gap 1, opp_overlap 3182657 CGGCGGCAAGAAAAA GGACGGCATTGGCGATC TCGCGCG GCTCGCCCA-GACGTCC CATAGGTGTCATTTG Smed_3035 3184822 - 3183314 - | carbohydrate kinase FGGY Smed_3036 3185193 - 3184858 - | alkylhydroperoxidase Smed_3037 3186503 - 3185190 - | branched-chain alpha-keto acid dehydrogenase subunit E2 Smed_3038 3187477 - 3186500 - | transketolase central region Smed_3039 3188502 - 3187474 - | dehydrogenase E1 component Smed_3040 3189533 - 3188487 - | monosaccharide-transporting ATPase Smed_3041 3191077 - 3189530 - | ABC transporter related TERM 2691 3191111 - 3191138 + r 100 -19.9 -3.09933 | ATCCAAGTCGAGTCC GGGCCGGCTCC TCAGAC GGAGCCGGCCC TTCGGTCACTTCGGG Smed_3042 3192091 - 3191144 - | ABC-type sugar transport system periplasmic component-like protein TERM 2692 3192056 - 3192071 + g 70 -11.8 -3.1886 | TAGAAATCCTACGAC GGCGGC GGCC GCCGCC TTCCTCCAATTAGCT TERM 2693 3192959 - 3192981 + G 74 -4.7 -4.63218 | overlap 3192960 CCTGCGGCAGGCCGG CGCCGTCGG CGACA CCAACGGCA TTTTCTTCGACAGCG Smed_3043 3192219 - 3193196 + | DeoR family transcriptional regulator Smed_3044 3193751 - 3194260 + | YbaK/prolyl-tRNA synthetase associated region Smed_3045 3194321 - 3195313 + | thioredoxin Smed_3046 3195455 - 3196135 + | peptidase S16 lon domain-containing protein TERM 2694 3196291 - 3196256 - g 73 -8.2 -4.07687 | gap 1, opp_overlap 3196285 ACTGGTCTCCGAAAA GGCCCGCC-TCGCCTAT CCG ATCCGCGACGGCGTGCC GATCATGCTGATCTC Smed_3047 3196143 - 3196331 + | hypothetical protein Smed_3048 3197593 - 3196379 - | 2-octaprenyl-6-methoxyphenyl hydroxylase Smed_3049 3197678 - 3198562 + | acyl-CoA thioesterase II Smed_3050 3198799 - 3199137 + | nitrogen regulatory protein P-II Smed_3051 3199165 - 3200520 + | ammonium transporter TERM 2695 3200583 - 3200608 + F 100 -8.9 -5.03145 | overlap 3200584 3200585 CCTGCGGATCGCCCT TCGCCCGGATC GCAG GATCCGGGCAC TTTTTTGCGCGGTTC TERM 2696 3200584 - 3200607 + F 77 -12.4 -3.61164 | overlap 3200583 3200585 CTGCGGATCGCCCTT CGCCCGGATC GCAG GATCCGGGCA CTTTTTTGCGCGGTT TERM 2697 3200585 - 3200606 + F 86 -15.9 -2.75975 | overlap 3200584 3200583 TGCGGATCGCCCTTC GCCCGGATC GCAG GATCCGGGC ACTTTTTTGCGCGGT TERM 2698 3200668 - 3200694 + F 75 -12.4 -3.21258 | overlap 3200664 TTTGCCGCTGCACGC GCATGGTTAATG TCG CATTAACCCTGC TTCGCTTAGGTTGAT TERM 2699 3200941 - 3200954 + G 71 -5.9 -4.35885 | overlap 3200938 TCTGGCGGCAGATCG CCTCG CTGG CGGGG TTTGTTCTCCTCGGT Smed_3052 3200862 - 3203534 + | cell divisionFtsK/SpoIIIE Smed_3053 3203650 - 3204312 + | outer membrane lipoprotein carrier protein LolA TERM 2700 3204397 - 3204414 + F 95 -10.5 -4.8269 | opp_overlap 3204397 3204396 CAGCATCAGAGAAAC GGCCGCT TTCG GGCGGCC TTTTTCATGCTTGTC Smed_3054 3204509 - 3205315 + | exodeoxyribonuclease III Smed_3055 3205803 - 3205348 - | cyclic nucleotide-binding protein Smed_3056 3206602 - 3205841 - | two component transcriptional regulator TERM 2701 3206589 - 3206567 - G 70 -9.8 -3.66424 | opp_overlap 3206579 3206583 3206584, overlap 3206568 CAAAACTATCTCAAA TGCCACGCTT GGC AAGCGCGGCG GTCGCTGCCGCATGT TERM 2702 3206832 - 3206857 + G 73 -8.2 -4.07568 | opp_overlap 3206826 3206825 CGTGAAAACCGCCCC GCGCGACCGC CGGCGC GCGCTCGTGC TTTTCGACGGACACG Smed_3057 3206770 - 3207318 + | hypothetical protein Smed_3058 3207956 - 3207399 - | putative phosphohistidine phosphatase, SixA TERM 2703 3208042 - 3208025 - R 100 -14.1 -5.44119 | TGGAGTGTAAAAAAA GCCGCCC CGAA GGGCGGC CAGATGGCGGAAGCT Smed_3059 3209475 - 3208066 - | isopropylmalate isomerase large subunit TERM 2704 3208131 - 3208094 - G 74 -6.1 -4.4017 | overlap 3208096 CGAATGTCGACAAAA TGCCCGGCGATCGCCGC TGCA GCCGCCATTGCCGGAGA AAGCAGATGCGTGCG TERM 2705 3209140 - 3209094 - G 70 -13.1 -2.87132 | overlap 3209097 GGCTGTCGCCACAGA CGATCGTCATGCCCG-GCAGGGT GAA ACCCTGCTCGGGGCCGACGAT-G TGAACGATCCCCTGG TERM 2706 3209138 - 3209097 - G 78 -15.9 -2.69151 | gap 1, overlap 3209094 TGTCGCCACAGACGA TCGTCATGCCCG-GCAGGGT GAA ACCCTGCTCGGGGCCGACGA TGTGAACGATCCCCT Smed_3060 3209705 - 3209553 - | hypothetical protein Smed_3061 3209812 - 3210291 + | MarR family transcriptional regulator Smed_3062 3210288 - 3211526 + | Bcr/CflA subfamily drug resistance transporter Smed_3063 3212795 - 3211578 - | argininosuccinate synthase TERM 2707 3212619 - 3212633 + g 85 -5.6 -5.00616 | ATAGATCTCCTTGAT GCCGAG CAT CTCCGC TTTTTTGCGGGCCGG Smed_3064 3212963 - 3213604 + | lysine exporter protein LysE/YggA Smed_3065 3214471 - 3213677 - | ABC transporter related Smed_3066 3215346 - 3214468 - | inner-membrane translocator TERM 2708 3215481 - 3215457 - R 100 -15 -3.9941 | CGCTCTATAAGCAAA CCGCCCCCGT ATGGA ACGAGGGCGG CGAAAACGCAACAAT Smed_3067 3216492 - 3215539 - | hypothetical protein TERM 2709 3215755 - 3215732 - G 78 -12.4 -3.79787 | gap 1, overlap 3215736 TCATAGTAATTGAAA CCG-AGCGCCG CGA CGGCGCCACGG GAAACGGAATCGGTG TERM 2710 3215881 - 3215865 - G 71 -13.7 -2.66733 | TCGGAATGTAGATCA CGTCGGC GCG GCCGACG AGCGCACGAGCCGCC TERM 2711 3216040 - 3216019 - G 78 -10.1 -4.06491 | CGAATTGTAGAGAAA GCCGATCGT CTTG ACGTTCGGC AGGATCTCCTTGATC TERM 2712 3216644 - 3216620 - R 71 -12.9 -2.62667 | overlap 3216609 3216619 3216617 TCAATCGGCAAATAC CCGACCGCA CGAATAC TGCGGTCGG TGAAGACGTTTGATC Smed_3068 3217935 - 3216694 - | radical SAM protein TERM 2713 3218188 - 3218162 - R 95 -19.5 -2.62616 | overlap 3218166 CCACCGGCGAGACGA CGAAGGCCGGC GCATG GCCGGCCTTCG CAAATCGAAAGATCG TERM 2714 3218184 - 3218166 - R 79 -13.1 -3.24747 | overlap 3218162 CGGCGAGACGACGAA GGCCGGC GCATG GCCGGCC TTCGCAAATCGAAAG Smed_3069 3218717 - 3218214 - | putative signal peptide protein Smed_3070 3219446 - 3219069 - | hypothetical protein TERM 2715 3219538 - 3219550 + r 71 -10.5 -3.51778 | overlap 3219536 CCATTTCAAAGTCGC GGGCC TCC GGCCC TATTTCATGTGGTCG phhB 3219867 - 3219550 - | pterin-4-alpha-carbinolamine dehydratase Smed_3072 3220689 - 3220102 - | 2'-5' RNA ligase Smed_3073 3221456 - 3220815 - | GDSL family lipase TERM 2716 3221716 - 3221774 + G 78 -15.8 -2.71712 | opp_overlap 3221724 3221725 3221727, overlap 3221754 3221755 3221766 GGAGCGGCTCGACGG CGGCGAAATCATCATCGCCGACACGGCG CTC CACCGCCTCGGCGAGGATGCGGTCGCCG ATTTCCGCGGCCGCA TERM 2717 3221766 - 3221724 - g 85 -14.8 -3.53811 | opp_overlap 3221716 3221754 3221755, overlap 3221725 3221727 TCGACGGCGGCGAAA TCATCATCGCCGACACGGCG CTC CACCGCCTCGGCGAGGATGC GGTCGCCGATTTCCG TERM 2718 3221765 - 3221725 - g 86 -18.3 -2.72144 | opp_overlap 3221716 3221754 3221755, overlap 3221724 3221727 CGACGGCGGCGAAAT CATCATCGCCGACACGGCG CTC CACCGCCTCGGCGAGGATG CGGTCGCCGATTTCC TERM 2719 3221763 - 3221727 - g 79 -15.1 -2.90615 | opp_overlap 3221716 3221754 3221755, overlap 3221725 3221724 ACGGCGGCGAAATCA TCATCGCCGACACGGCG CTC CACCGCCTCGGCGAGGA TGCGGTCGCCGATTT Smed_3074 3221528 - 3222247 + | ABC transporter related TERM 2720 3224330 - 3224359 + G 78 -14.9 -3.02144 | CGACGATTATCGATC CCGACGCCTCCGC GCAG GAGGAGGCGGCGG TCTTGAAGACGGTGA Smed_3075 3222244 - 3224835 + | hypothetical protein TERM 2721 3225308 - 3225326 + G 80 -5.9 -4.71828 | overlap 3225311 AAGTGGGTCGTGATG CTGGCGC CGCTT GCGCTGG TTTTCTTCCTGAGCT Smed_3076 3225083 - 3225820 + | hypothetical protein TERM 2722 3225841 - 3225856 + F 100 -11.8 -5.4505 | opp_overlap 3225841 ACGAATGATGAAAAA GGCGGC TTCG GCCGCC TTTTTTGTTGGCCGA TERM 2723 3225856 - 3225841 - f 100 -11.8 -4.81685 | opp_overlap 3225841 ACGAATGATGAAAAA GGCGGC TTCG GCCGCC TTTTTTGTTGGCCGA Smed_3077 3225916 - 3226473 + | GCN5-related N-acetyltransferase clpP 3227120 - 3226503 - | ATP-dependent Clp protease proteolytic subunit Smed_3079 3227506 - 3227156 - | hypothetical protein Smed_3080 3227817 - 3227503 - | regulatory protein ArsR Smed_3081 3228426 - 3228016 - | hypothetical protein TERM 2724 3228135 - 3228145 + g 90 -2.4 -5.47218 | CGCCCTGTTTGGCGG CCAG CTT CGGG TTTTTTTCGATGCGG Smed_3082 3229542 - 3228754 - | hypothetical protein TERM 2725 3228802 - 3228812 + g 73 -8.2 -4.04295 | overlap 3228788 TGCGGCGCCGATGAT CGCC CCC GGCG TTTCCTTGTCCTTCA TERM 2726 3229638 - 3229623 - R 70 -4.7 -4.41047 | ATTCTTCAACGAAAA GTCAC GTTGGA GTGAC TGCAGCAAAGCGGTG TERM 2727 3229718 - 3229668 - R 100 -22.9 -4.1585 | gap 1, opp_overlap 3229675 3229680, overlap 3229675 3229680 GGATAACCGCGAAAA CAGGCAATAAAATGCCGGGGCGCC GCTG GACGCCCCGGCATTTTATT-CATG CGGGTCGCCGATCAG TERM 2728 3229712 - 3229675 - R 100 -25.1 -3.28785 | opp_overlap 3229675 3229680, overlap 3229668 3229680 CGCGAAAACAGGCAA TAAAATGCCGGGGCGCC GCTG GACGCCCCGGCATTTTA TTCATGCGGGTCGCC TERM 2729 3229675 - 3229712 + r 100 -23.7 -3.15544 | gap 1, opp_overlap 3229675 3229668 3229680, overlap 3229680 CGCGAAAACAGGCAA TAAAATGCCGGGGCG-CC GCT GGACGCCCCGGCATTTTA TTCATGCGGGTCGCC TERM 2730 3229707 - 3229680 - R 100 -20.6 -4.7268 | opp_overlap 3229675 3229680, overlap 3229675 3229668 AAACAGGCAATAAAA TGCCGGGGCGCC GCTG GACGCCCCGGCA TTTTATTCATGCGGG TERM 2731 3229680 - 3229707 + r 100 -19.2 -4.71426 | gap 1, opp_overlap 3229680 3229675 3229668, overlap 3229675 AAACAGGCAATAAAA TGCCGGGGCG-CC GCT GGACGCCCCGGCA TTTTATTCATGCGGG Smed_3083 3232420 - 3229730 - | aconitate hydratase TERM 2732 3232632 - 3232645 + H 85 -2.3 -5.58454 | opp_overlap 3232632 TGCCAGACCAAGCAA GGTCC AATC GGAAC TTTTTTTGCTCTGCG Smed_3084 3232691 - 3233314 + | cytochrome c biogenesis protein CcmA TERM 2733 3233349 - 3233380 + G 73 -2.8 -4.71426 | gap 1, overlap 3233352 TCTCAAGCTTTCGGT GCGCGCCGG-CGGCG GCG CGATGATCGGCGTAC TTTTCTTCATGACCG TERM 2734 3233737 - 3233782 + G 77 -15.4 -2.65264 | opp_overlap 3233714 ATCACCCTGATCGGA GC-GGTCGGCGCAGCGGTAGCG GTGG CGCTTCCGC-GCGGCGGCCTGC TGGTATCGATCCTGG Smed_3085 3233311 - 3233970 + | heme exporter protein CcmB Smed_3086 3234027 - 3234797 + | heme exporter protein CcmC Smed_3087 3234794 - 3234970 + | Heme exporter protein D (CcmD) Smed_3088 3234967 - 3235566 + | periplasmic protein thiol--disulphide oxidoreductase DsbE Smed_3089 3236160 - 3235570 - | hypothetical protein Smed_3090 3236789 - 3236157 - | intracellular septation protein A TERM 2735 3236605 - 3236582 - G 74 -10.2 -3.77196 | TCATCATCCAGGAAA CGGCGAGAGC CGCA GCCGTCGCCG CCATGAAGAGGCCGG Smed_3091 3238449 - 3236887 - | signal recognition particle-docking protein FtsY TERM 2736 3238374 - 3238389 + g 71 -8.2 -3.96148 | opp_overlap 3238371, overlap 3238378 CGGCATCCGAAACCT CCTGCG GCGG CGCGGG TTTCTCGTCGACGGC Smed_3092 3239742 - 3238468 - | MiaB-like tRNA modifying enzyme dapF 3240617 - 3239739 - | diaminopimelate epimerase Smed_3094 3241751 - 3240738 - | hypothetical protein TERM 2737 3241546 - 3241514 - G 73 -6.3 -4.26076 | gap 1 CGACCTGGATCAAAA GGGT-CGCGTGACC GACCAT GGTCACACGCAGCC GATCGCCGGCGACGG TERM 2738 3241950 - 3241980 + H 84 -7.4 -4.81249 | opp_overlap 3241953, overlap 3241951 AGAGCCAGGAGGTCA ACATCCGACAGCGC GTG GCGCCCTCGGGTGG TTTTTGGCTTTGCGC TERM 2739 3241951 - 3241979 + H 73 -10.9 -3.48026 | opp_overlap 3241953, overlap 3241950 GAGCCAGGAGGTCAA CATCCGACAGCGC GTG GCGCCCTCGGGTG GTTTTTGGCTTTGCG TERM 2740 3243035 - 3243017 - g 76 -8.8 -4.11692 | overlap 3243005 3243002 3243018 CATCGACGCCGAAAA GGCGGC GGCCATG GCCGCC AAGATGGCCAAAGGC TERM 2741 3243525 - 3243497 - g 72 -12.3 -3.29144 | opp_overlap 3243504 3243508 3243513, overlap 3243480 CGAGGCCCTGCAGAA GCAGGCCGAAGCC GCC GGCCTCGGCAAGC CCGGCGGTGGCTTGC Smed_3095 3242073 - 3243617 + | signal recognition particle protein Smed_3096 3243630 - 3243965 + | chorismate mutase rpsP 3244004 - 3244378 + | 30S ribosomal protein S16 TERM 2742 3244397 - 3244430 + F 100 -18.3 -3.04902 | opp_overlap 3244402, overlap 3244402 TCGCCGATCGGCAGT GAAAACGGGCGGCAT TTCC ATGCCGCCCGTTTTG CTTTATGTGCTCCGG TERM 2743 3244402 - 3244425 + F 100 -18.2 -4.65153 | opp_overlap 3244402, overlap 3244397 GATCGGCAGTGAAAA CGGGCGGCAT TTCC ATGCCGCCCG TTTTGCTTTATGTGC TERM 2744 3244425 - 3244402 - f 100 -18.2 -4.18494 | opp_overlap 3244402 3244397 GATCGGCAGTGAAAA CGGGCGGCAT TTCC ATGCCGCCCG TTTTGCTTTATGTGC TERM 2745 3245033 - 3244992 - g 73 -10.9 -3.57561 | gap 1 CTCGAAGCGGGCAAA CTCGTCATCGACCCG-ACTG CAG CAGGGCTGGTCGATGATGAG AAGAGTGGCCCAGGC rimM 3244455 - 3245075 + | 16S rRNA-processing protein trmD 3245086 - 3245808 + | tRNA (guanine-N(1)-)-methyltransferase Smed_3100 3246536 - 3245790 - | hypothetical protein TERM 2746 3245983 - 3245966 - G 70 -7.7 -4.07568 | overlap 3245945 CGCCCGCGGTGAAAA CCACGAT CGCG ATCGCGG CGATGATGATGGAGA TERM 2747 3247331 - 3247313 - g 70 -7.4 -4.07568 | overlap 3247314 3247317 TCTGGCCGCCGAAAA GGCAGC AGCCGAA GCTGCC GAGGCAAAGGCAGCA rplS 3246849 - 3247382 + | 50S ribosomal protein L19 TERM 2748 3247407 - 3247432 + F 100 -19.1 -4.59773 | opp_overlap 3247411, overlap 3247411 CTTCAGAGTTGTGTC GAAAGGCGGCC TCAG GGCCGCCTTTC TTTTTGCACCTGCCG TERM 2749 3247411 - 3247428 + F 100 -14.1 -4.86385 | opp_overlap 3247411, overlap 3247407 AGAGTTGTGTCGAAA GGCGGCC TCAG GGCCGCC TTTCTTTTTGCACCT TERM 2750 3247428 - 3247411 - f 88 -14.1 -3.53563 | opp_overlap 3247411 3247407 AGAGTTGTGTCGAAA GGCGGCC TCAG GGCCGCC TTTCTTTTTGCACCT TERM 2751 3247907 - 3247950 + G 70 -11.9 -3.14931 | gap 2, opp_overlap 3247907 3247946 3247947, overlap 3247893 TGCGGGGCGACGAGA CCCGCTTT-A-GCGATGCGAA GAGT TTCGCGGCGCTTGAAAGCGGG TTGATCGGCGCTCAG Smed_3102 3247507 - 3248316 + | extracellular solute-binding protein Smed_3103 3248385 - 3249209 + | polar amino acid ABC transporter, inner membrane subunit Smed_3104 3251304 - 3249478 - | ABC transporter related TERM 2752 3250424 - 3250442 + g 77 -2.4 -5.03314 | GCGACAATCACGCGG TCACCG TAAGCCT TGGTGA TTTTTTCCGCCTCGA Smed_3105 3251971 - 3251309 - | thiamine pyrophosphokinase Smed_3106 3252521 - 3252036 - | hypothetical protein TERM 2753 3252463 - 3252416 - G 71 -9.1 -3.68569 | gap 3, overlap 3252419 CGATCCAGGCAATAA CGACCCGCCGCTCG--GCCGCCAG CGC CCGGCGGATGCGAACGTCGGG-CG CAAGACGGGAAGGGC tbpA 3252828 - 3253856 + | thiamine transporter substrate binding subunit TERM 2754 3253911 - 3253939 + G 78 -12.3 -3.70546 | opp_overlap 3253910 3253911, overlap 3253905 3253912 AAACAGGATGACAAT GGCCGCCGGGGGT TTC GCCCTTGGCGGCG TTCTGCTTTTCATCG TERM 2755 3253912 - 3253938 + G 78 -15.8 -2.81604 | opp_overlap 3253911 3253910, overlap 3253911 3253905 AACAGGATGACAATG GCCGCCGGGGGT TTC GCCCTTGGCGGC GTTCTGCTTTTCATC thiP 3253909 - 3255504 + | thiamine transporter membrane protein Smed_3109 3255501 - 3256208 + | ABC transporter ATP-binding protein TERM 2756 3256439 - 3256418 - f 75 -5.2 -4.57569 | gap 1, opp_overlap 3256429 GGATGTCTTCAAAAA TTCGC-GCA TCCGT TGCTGCGAA ACCACGGGGCAACTA Smed_3110 3256627 - 3258138 + | peptidase M48 Ste24p TERM 2757 3258272 - 3258302 + T 73 -12.6 -2.77658 | overlap 3258270 CTCATCCCGCTCCCG CGACCTTCTCCGCA TGA TGGGGAGAAGGTCC TCGTTGCGTCTAATA rpoH2 3259303 - 3258437 - | RNA polymerase factor sigma-32 TERM 2758 3258940 - 3258928 - G 76 -6.2 -4.64676 | GCAGGTTGAAGAAAA GCGC CTTCT GCGC CGAACTGGTTCCCCC TERM 2759 3259676 - 3259635 - R 100 -19.7 -2.75825 | gap 1, opp_overlap 3259637 3259648, overlap 3259648 CTGGCAACAAATCTA GGGCAACAAAAAACCCGGCC TGC GGCCGGGTTTTTTGTT-CGC TTCTCAACTCTTTGA TERM 2760 3259637 - 3259676 + r 100 -23.2 -3.38218 | gap 1, opp_overlap 3259635 3259648, overlap 3259648 GGCAACAAATCTAGG GC-AACAAAAAACCCGGCC TGC GGCCGGGTTTTTTGTTCGC TTCTCAACTCTTTGA TERM 2761 3259648 - 3259664 + r 100 -15.1 -5.5074 | opp_overlap 3259635 3259648, overlap 3259637 TAGGGCAACAAAAAA CCCGGCC TGC GGCCGGG TTTTTTGTTCGCTTC TERM 2762 3259664 - 3259648 - R 100 -15.1 -5.46657 | opp_overlap 3259648 3259637, overlap 3259635 TAGGGCAACAAAAAA CCCGGCC TGC GGCCGGG TTTTTTGTTCGCTTC Smed_3112 3260309 - 3259740 - | CarD family transcriptional regulator Smed_3113 3261055 - 3260717 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2763 3261477 - 3261494 + r 71 -10.5 -3.53811 | overlap 3261474 CCTCGTGGTCCGCGC CCGGCCG CAGC CGGTCGG TTTCGCGACGCTCCC Smed_3114 3261867 - 3261454 - | RNA-binding S4 domain-containing protein Smed_3115 3264957 - 3261877 - | helicase domain-containing protein TERM 2764 3262440 - 3262480 + g 76 -13.3 -3.41878 | gap 2, overlap 3262433 CATCCGTTTCGCTCA CGGCGGCTTCTCCGGCAGG TGTGT CC-GCCGGGGTAG-CGCCG TTCTGACTTGCCAGG TERM 2765 3265688 - 3265665 - R 90 -5.1 -5.40072 | overlap 3265666 GCCCGTCGAAAAAAA TCCGGCGCC GCAAAG GGCGGCGGG AACACAGTCGGTCAG TERM 2766 3265687 - 3265666 - R 72 -8.6 -3.83561 | overlap 3265665 CCCGTCGAAAAAAAT CCGGCGCC GCAAAG GGCGGCGG GAACACAGTCGGTCA Smed_3116 3266438 - 3265713 - | acetoacetyl-CoA reductase Smed_3117 3267734 - 3266553 - | acetyl-CoA acetyltransferase TERM 2767 3266665 - 3266651 - G 76 -7.1 -4.42748 | opp_overlap 3266632 TCATTTCAAAAAGAA GCGTG TTCAG CACGC GGGCTCCGGACGCGC TERM 2768 3266973 - 3267017 + g 71 -11.4 -3.44146 | opp_overlap 3266965, overlap 3266966 CAGCAGAGCGGCGGC GGCGCCGTCATTGAGGCC CGACGCGTT GGCGGCAGTGACGGTGCC TTCCTTGTCGAAAGC Smed_3118 3267957 - 3268535 + | polyhydroxyalkonate synthesis repressor, PhaR TERM 2769 3268587 - 3268569 - T 100 -13.8 -5.33405 | opp_overlap 3268564 CGTACCAAAGAAAAA GGGCCGGC AAT GCCGACCC TTCGAATTTCATCCG rpmF 3268802 - 3268617 - | 50S ribosomal protein L32 Smed_3120 3269587 - 3268940 - | glutathione S-transferase domain-containing protein mtgA 3270454 - 3269666 - | monofunctional biosynthetic peptidoglycan transglycosylase Smed_3122 3270606 - 3271520 + | polyprenyl synthetase Smed_3123 3271524 - 3272579 + | histidinol-phosphate aminotransferase Smed_3124 3273430 - 3272642 - | short chain dehydrogenase TERM 2770 3272729 - 3272719 - G 84 -8.2 -4.53034 | opp_overlap 3272720, overlap 3272720 CCGACAGAAGGAAAA CGGC CGG GCCG ACCATTTCGTCCACG Smed_3125 3274934 - 3273447 - | ABC transporter related TERM 2771 3274784 - 3274796 + g 70 -7.7 -4.08064 | TGCCGGAAATAATGT TCGAC AGC GTCGA TTTTCCGGCACCGTT Smed_3126 3275893 - 3274961 - | monosaccharide-transporting ATPase TERM 2772 3275915 - 3275944 + r 75 -9.9 -3.81488 | overlap 3275936 TCCTCCGATTTGCCC GGTGGCGCCCTGC CCTC GCAGGAAGTCACC TTCTCTTTGCCGGCC TERM 2773 3275955 - 3275976 + r 95 -13.7 -4.07568 | TCACCTTCTCTTTGC CGGCCGGCA CCAT TGCTGGCCG TTTTCAGCGCCCCAC Smed_3127 3276993 - 3276019 - | monosaccharide-transporting ATPase Smed_3128 3277164 - 3278009 + | transketolase domain-containing protein TERM 2774 3278463 - 3278501 + G 100 -13.3 -4.84761 | opp_overlap 3278461 3278460 ACTCGGTCGAAACCG CCGCGGCCGTCG-AATGGG CCG CCCATTATGATGGCC-CGG TTTTTCTGCGCCTGT TERM 2775 3278796 - 3278813 + G 71 -11.3 -3.40403 | CCTTCGGCGGGCTCG GTTCGGC CGTG GCCGAAC TTGTCGTGGCCGAAG Smed_3129 3278009 - 3278977 + | transketolase domain-containing protein TERM 2776 3279001 - 3279029 + F 71 -13.1 -2.55351 | overlap 3279000 AGGTAGATTTCGTGC CGGGCGCGGCA ATCCTCC TGCCGCGCCCC ATTCCTGTCAGCCGG Smed_3130 3279052 - 3280521 + | carbohydrate kinase FGGY Smed_3131 3280545 - 3281495 + | DeoR family transcriptional regulator Smed_3132 3281541 - 3282326 + | short-chain dehydrogenase/reductase SDR ispG 3283663 - 3282410 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Smed_3134 3285031 - 3283841 - | major facilitator transporter Smed_3135 3285936 - 3285139 - | DeoR family transcriptional regulator TERM 2777 3285875 - 3285887 + g 85 -3.3 -5.38054 | overlap 3285876 TCGGTTCTCAGCCTT TCCTG GAT CAGGC TTTTTCTTTCTCGCA Smed_3136 3286188 - 3286961 + | extracellular solute-binding protein TERM 2778 3287050 - 3287086 + F 100 -22.3 -4.10161 | opp_overlap 3287051, overlap 3287051 CCATCCTGCTTATGA ATCGCGATCCGTCCCGG CAC CCGGGACGGATCGCGCG TTTTGAAAGGTGCTC TERM 2779 3287085 - 3287051 - f 100 -25.8 -3.14344 | opp_overlap 3287050 3287051 CATCCTGCTTATGAA TCGCGATCCGTCCCGG CAC CCGGGACGGATCGCGC GTTTTGAAAGGTGCT TERM 2780 3287051 - 3287085 + F 100 -25.8 -3.05775 | opp_overlap 3287051, overlap 3287050 CATCCTGCTTATGAA TCGCGATCCGTCCCGG CAC CCGGGACGGATCGCGC GTTTTGAAAGGTGCT Smed_3137 3287104 - 3287784 + | polar amino acid ABC transporter, inner membrane subunit TERM 2781 3288224 - 3288270 + G 71 -11.5 -3.48276 | gap 1, opp_overlap 3288186 3288185 3288225, overlap 3288228 TTCCGGCGGCCAGCA ACAGCGCGTGGCGATCGCCCGG GCGC TCGCGCCATCGCCGCGCG-TGC TTCTCTGCGACGAAC TERM 2782 3288269 - 3288225 - g 70 -12.1 -3.14132 | gap 1, opp_overlap 3288224 3288228, overlap 3288186 3288185 TCCGGCGGCCAGCAA CAGCGCGTGGCGATCGCCCG GGCGCT CGCGCCATCGCCGCGCG-TG CTTCTCTGCGACGAA TERM 2783 3288228 - 3288267 + G 90 -17.8 -2.88822 | opp_overlap 3288185 3288225, overlap 3288224 GGCGGCCAGCAACAG CGCGTGGCGATCGCCCGG GCGC TCGCGCCATCGCCGCGCG TGCTTCTCTGCGACG Smed_3138 3287781 - 3288542 + | ABC transporter related Smed_3139 3292173 - 3288619 - | pyruvate carboxylase TERM 2784 3289166 - 3289148 - G 73 -11 -3.66654 | opp_overlap 3289144 3289155 3289156 GAGGCGAACTCGAAA TCGGTCAC CTC GCGACCGA GCTTCTCCTCTATGT TERM 2785 3292197 - 3292177 - R 71 -11.2 -3.27498 | CAGACGCGACATGAA TCCTGACC CATTC GGTCAGGA GGGGCGGGAGACGGT TERM 2786 3292246 - 3292289 + r 73 -3 -4.7497 | gap 1, overlap 3292244 3292248 3292256 GAGATCAGTCCCAGG CGGAAGGCG-AGCGCCACCAC ATG GTGCCGGTTTTTCGCCTTCAG TTTTTCCTGAATGCC Smed_3140 3292967 - 3292227 - | regulatory protein LuxR TERM 2787 3292999 - 3292989 - R 80 -4.6 -4.98531 | CCCTCAAATCAAAAA CGCG CAA CGCA ACCCCTCCAGGCCAG TERM 2788 3293111 - 3293100 - R 75 -5.8 -4.64657 | GGAAACCTGCAAAAA CTCG GAGT CGAG GCGTCAAGATAGCTA Smed_3141 3293296 - 3293135 - | hypothetical protein Smed_3142 3293350 - 3295107 + | cyclic beta-1,2-glucan ABC transporter TERM 2789 3295669 - 3295654 - f 73 -11.8 -3.03635 | opp_overlap 3295630, overlap 3295643 TAAACGGCGCCAAGA GCGCGG TGGA CCGCGC CGATCGTCTCGCCCG TERM 2790 3296289 - 3296276 - g 72 -3.7 -4.57341 | overlap 3296277 AAGCGGCGCGAAAAA TGGCG GGGT CGCCG AATCGTGCTGAGCTG Smed_3145 3295999 - 3296661 + | GntR family transcriptional regulator TERM 2791 3297865 - 3297879 + G 86 -7 -4.98061 | opp_overlap 3297852 3297853, overlap 3297866 AATTGTCCGTCTATG ACGGCG AGC CGCCGC TTTTGTTTGATCTGT TERM 2792 3297866 - 3297878 + G 70 -10.5 -3.5721 | opp_overlap 3297852 3297853, overlap 3297865 ATTGTCCGTCTATGA CGGCG AGC CGCCG CTTTTGTTTGATCTG Smed_3146 3296658 - 3298127 + | sulfatase TERM 2793 3298555 - 3298542 - g 83 -5.2 -5.00616 | TCGGGCGTCAAAAAA GCCG ATATTG CGGC GCTTGCCGGGAAACG Smed_3147 3298164 - 3299198 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein Smed_3148 3299209 - 3300009 + | ABC transporter related Smed_3149 3300006 - 3300332 + | hypothetical protein TERM 2794 3300538 - 3300583 + G 74 -10.6 -3.68738 | gap 3 CATTCTGATCGAGTA TCTCG--CCGACAGCTCATGGCG TTA TGCCGTGAGC-GTCGGGACGGGA TTGTCTCTTGGGATC TERM 2795 3300978 - 3300989 + G 72 -2.2 -4.72272 | CCGCCGGTTCCGGGC TCGG CTTC CTGA TTTTTGATGGGGCGA Smed_3150 3300329 - 3301150 + | binding-protein-dependent transport systems inner membrane component Smed_3151 3301147 - 3301938 + | binding-protein-dependent transport systems inner membrane component Smed_3152 3301935 - 3302834 + | pyridoxal 4-dehydrogenase Smed_3153 3302831 - 3303676 + | amidohydrolase 2 TERM 2796 3303930 - 3303914 - T 75 -9.3 -3.889 | overlap 3303915 CCCAAGCACAGGAAA TCCGCGC CCG GCGCGGG CGTGCCGAAGACGAA TERM 2797 3303929 - 3303915 - T 74 -12.8 -2.92858 | overlap 3303914 CCAAGCACAGGAAAT CCGCGC CCG GCGCGG GCGTGCCGAAGACGA Smed_3154 3305324 - 3304167 - | hypothetical protein TERM 2798 3305477 - 3305448 - R 100 -10 -5.27335 | overlap 3305473 GGCGCCAAAGAAAAA CCGGCCTTGCCC TAACGG GAACAAAGCCGG TTCAGCGCTTGCTCA TERM 2799 3305500 - 3305473 - R 71 -6.8 -4.20918 | overlap 3305448 CCTAACGGGAACAAA GCCGGTTCAGCG CTTG CTCAGATCCGGC AGTTACAGCAAAACC Smed_3155 3314115 - 3305503 - | glycosyltransferase 36 TERM 2800 3306865 - 3306832 - G 70 -7.5 -4.06055 | ATCGCGGAAACCAAA GGCGCCGCT-GGCCT GATAGA AAGCCGAGC-GCGCC ATGATCCGGCAGCCG TERM 2801 3312889 - 3312871 - G 79 -11 -3.96148 | CTTGCCGACGAGAAA GGAACCGA CAT TCGGCTCC TGCAGAGGCGCTTCG TERM 2802 3314023 - 3314041 + g 75 -11.6 -3.63276 | GGATTCTGGTTCCAC CCGGGACG GAT CGGCCCGG TTCTCGTTGTTCTGC Smed_3156 3315352 - 3314459 - | LysR family transcriptional regulator Smed_3157 3315466 - 3316884 + | hypothetical protein Smed_3158 3316895 - 3318316 + | FAD linked oxidase domain-containing protein Smed_3159 3318346 - 3319878 + | aldehyde dehydrogenase TERM 2803 3319914 - 3319946 + G 79 -9.7 -4.20516 | opp_overlap 3319921, overlap 3319941 CCATCAATGCAACGG TCAAGGAGGCGGGCT TCC GGCCCGCCTCGCGGA TTTCTTCGATCGGCG Smed_3160 3319895 - 3321127 + | aminotransferase class I and II TERM 2804 3321228 - 3321192 - T 91 -16.6 -3.59979 | gap 1, overlap 3321195 CCCGGTGACTTGAAA CGACCCCTCATCCGGCC CGCC GGCCGGTTGAGGGG-CA TTCACACCCCGACTT TERM 2805 3321226 - 3321195 - T 100 -21.6 -2.92613 | overlap 3321192 GGTGACTTGAAACGA CCCCTCATCCGGCC CGCC GGCCGGTTGAGGGG CATTCACACCCCGAC Smed_3161 3321795 - 3321247 - | XRE family transcriptional regulator TERM 2806 3323229 - 3323256 + G 74 -15 -2.62263 | gap 1, opp_overlap 3323224 CGGAGAAGAAGCATT TCGGCGAG-ATCG TGT CGATGCTCGCCGA TGCTCTGAAACGGGT Smed_3162 3321941 - 3323278 + | beta alanine--pyruvate transaminase Smed_3163 3324639 - 3323368 - | hydroxypyruvate reductase Smed_3164 3326406 - 3324751 - | choline dehydrogenase Smed_3165 3327339 - 3326566 - | 3-ketoacyl-(acyl-carrier-protein) reductase Smed_3166 3328856 - 3327336 - | putative dehydrogenase transmembrane protein Smed_3167 3329965 - 3328853 - | ABC transporter related Smed_3168 3330851 - 3329970 - | binding-protein-dependent transport systems inner membrane component Smed_3169 3331729 - 3330851 - | binding-protein-dependent transport systems inner membrane component Smed_3170 3333145 - 3331901 - | extracellular solute-binding protein TERM 2807 3332309 - 3332321 + g 71 -9.1 -3.68222 | opp_overlap 3332308 3332307 CATGCAGACGAAATC GGTGC CGG GCACC TTGTTCGCCTTCAGG Smed_3171 3334795 - 3333287 - | aldehyde dehydrogenase Smed_3172 3335574 - 3334795 - | enoyl-CoA hydratase/isomerase TERM 2808 3335586 - 3335601 + r 82 -10.4 -4.25104 | overlap 3335584 CCATCGACACCTCCC GCCAGC CGGC GCTGGC TTTTCATGGGCAGCG Smed_3173 3337186 - 3335567 - | coenzyme A transferase Smed_3174 3338192 - 3337191 - | oxidoreductase domain-containing protein Smed_3175 3339232 - 3338189 - | periplasmic binding protein/LacI transcriptional regulator TERM 2809 3339002 - 3338945 - G 74 -9.7 -3.86897 | gap 1 GGTATTGGCGAGAAA CTGCACGAAGCCGGCGGACTGCA-CGAC CTC GTCGACGCCGACCGCGAGCTCCGCAAAG AAACTGTTCGTGAGA TERM 2810 3339976 - 3339958 - g 81 -13.2 -3.80573 | CCTATGAGCAGCAAA TCGGCTTC GTC GAAGCCGA GGGCGGCCGTGCGAT Smed_3176 3339534 - 3340703 + | hypothetical protein Smed_3177 3342922 - 3340859 - | peptidyl-dipeptidase Dcp TERM 2811 3342636 - 3342654 + g 73 -8.8 -3.98282 | opp_overlap 3342612 TTGGGCGCGATCTCG CGCTCCAG TGC CTGGATCG TTTCGTTCGTGTGGG Smed_3178 3343230 - 3344342 + | 3-isopropylmalate dehydrogenase TERM 2812 3344366 - 3344402 + F 93 -12.9 -4.11371 | opp_overlap 3344370, overlap 3344361 3344372 CCGGTTAGGCCCGGA TGAATGGCACCTCCGGC TTT GCCGGGGGTGCTTTGCG TTTTGCGGGGTCTTG TERM 2813 3344372 - 3344396 + F 100 -19.3 -3.92659 | opp_overlap 3344370, overlap 3344361 3344366 AGGCCCGGATGAATG GCACCTCCGGC TTT GCCGGGGGTGC TTTGCGTTTTGCGGG Smed_3179 3344467 - 3345159 + | phosphoesterase PA-phosphatase related TERM 2814 3345185 - 3345163 - T 100 -16.2 -5.35815 | overlap 3345164 GAGAGCAAATAAAAA GCCGGCGCGG AAG CCGCGCCGGA GTCAGGAGATATGTG TERM 2815 3345184 - 3345164 - T 100 -19.7 -3.79862 | overlap 3345163 AGAGCAAATAAAAAG CCGGCGCGG AAG CCGCGCCGG AGTCAGGAGATATGT Smed_3180 3347105 - 3345216 - | major facilitator transporter TERM 2816 3346218 - 3346206 - G 83 -6.9 -4.93316 | overlap 3346208 GAAGAAGACGAAAAA GCCCG TGC CGAGC AGGAGCGAGGCGGCG TERM 2817 3347055 - 3347072 + g 85 -10.5 -4.36914 | opp_overlap 3347015 GACCTTCTTCTCCTC GCCGGTC ATCG GGCCGGC TTTTGTGCCGCCCGC Smed_3181 3347400 - 3347570 + | hypothetical protein Smed_3182 3347683 - 3348717 + | aspartate-semialdehyde dehydrogenase TERM 2818 3348745 - 3348776 + F 84 -13 -3.6512 | gap 1 GGCCTCGATTCTTAG CCCCGCCTTTC-TCG CTA CGGCGACAGGCGGGG TTTCGCAGTTCTTTC Smed_3183 3348875 - 3349696 + | lytic murein transglycosylase TERM 2819 3349845 - 3349818 - g 78 -14.3 -3.01924 | opp_overlap 3349807 GATTGTCGTTCAAGA TCATTGCTGGC GAGCAG GCCAGCAATGA TGGCGCGACCTGTTC Smed_3184 3349796 - 3350140 + | hypothetical protein TERM 2820 3350250 - 3350275 + T 71 -11.9 -2.93991 | overlap 3350245 TGTCGCTCTTTTGCT CTTTCTCCGCC GGCC GGCGGAGAAAC TCTGATTGCGTTGGG Smed_3185 3350948 - 3350301 - | carbonate dehydratase TERM 2821 3350376 - 3350393 + g 74 -4.8 -4.55798 | gap 1, opp_overlap 3350373 3350376, overlap 3350376 3350377 CGAAATATCGAACCA C-GCGCC GTGCA GGCGCAG TTTTCCTTTCGACTC Smed_3186 3352026 - 3351145 - | pyridoxamine kinase TERM 2822 3355700 - 3355710 + G 76 -8.2 -4.19817 | opp_overlap 3355699 3355700 GGGTCACGCAGAAAG GCCG TAT CGGC TTTTCCCTCAATGGC TERM 2823 3356674 - 3356652 - g 76 -8.3 -4.18018 | overlap 3356631 3356667 GGGCTTCATTGAAAA CGGCGTGCC GGCAA AGCTCGCCG AGGAAATCGCGGAGC Smed_3187 3352309 - 3357096 + | NAD-glutamate dehydrogenase TERM 2824 3358301 - 3358330 + G 80 -16.5 -2.56095 | overlap 3358297 AGCACGGATTCGGGC GGCCTGTTCGGCA CCGC TGCCGAAAAGGCC TACATTGCCTATGGC TERM 2825 3358410 - 3358434 + G 70 -9.9 -3.60234 | overlap 3358413 ATCTCGCCCGCAGTG TATCGCCCGAC GAA GCCGGGCGCTA TTTCGGCCTCTATGC Smed_3188 3357221 - 3358612 + | major facilitator transporter TERM 2826 3358617 - 3358636 + T 70 -12.2 -2.75844 | overlap 3358616 GCCCGACGTGAGGGG GCCACAAC CGAG GTTGTGGC ATTTCGCCTGCAGCA purH 3360278 - 3358668 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 2827 3359427 - 3359442 + g 70 -7.5 -4.07687 | opp_overlap 3359427 3359426 GGCATGCTTGATAAT GGCGC AGGCAG GCGCC TTTTCCGGCAGGAAT TERM 2828 3360105 - 3360075 - G 77 -13.2 -3.54741 | overlap 3360076 3360092 3360093 CATGATCTCCGGAAA CCCCGTCAGCTCCG AAA CGTCGCTGACGGGA AGGCCCGCATCGGCA TERM 2829 3360104 - 3360076 - G 75 -14.5 -2.7263 | overlap 3360075 3360092 3360093 ATGATCTCCGGAAAC CCCGTCAGCTCCG AAA CGTCGCTGACGGG AAGGCCCGCATCGGC Smed_3190 3362136 - 3360430 - | heparinase II/III family protein TERM 2830 3361649 - 3361633 - G 73 -6.5 -4.386 | overlap 3361635 3361637 GAATCGGCGATAAAA GCCATGC TCG GCATTGC GCAGCACGACCGGCG Smed_3191 3363794 - 3362382 - | Fmu (Sun) domain-containing protein TERM 2831 3363704 - 3363744 + g 72 -11.8 -3.25459 | gap 1, overlap 3363702 3363707 CCGGTTTGGCCGGGG CAAGCGCGCCGGCCTTGGG CCCT CCCAAT-CCGGGGCGCCTG TGTTCTCGGATTCGT Smed_3192 3364753 - 3363794 - | heat shock protein HtpX TERM 2832 3364285 - 3364274 - G 74 -5.8 -4.40561 | overlap 3364271 TCCGCCGAAAAAGAA GGCA AAGT TGCC GAGCATGGAAATCGC Smed_3193 3364935 - 3365135 + | hypothetical protein Smed_3194 3367251 - 3365302 - | acetyl-CoA synthetase Smed_3195 3367525 - 3368223 + | hypothetical protein TERM 2833 3368272 - 3368253 - T 78 -9.2 -4.03141 | opp_overlap 3368253 ATGACGATTAAAGAA CCCGGATC GCAG GAGCCGGG TTTTTTGTTGGCCTT TERM 2834 3368253 - 3368272 + T 100 -9.2 -5.4756 | opp_overlap 3368253 ATGACGATTAAAGAA CCCGGATC GCAG GAGCCGGG TTTTTTGTTGGCCTT Smed_3196 3370221 - 3368314 - | AMP-dependent synthetase and ligase TERM 2835 3369517 - 3369546 + g 100 -16.5 -4.0616 | gap 1, opp_overlap 3369504 GAGCGGATCCGTCGA GGCGACGGAGGCGC AAG GTGCCTCC-TCGCC TTTATCCTTGGCCTC TERM 2836 3369806 - 3369791 - G 73 -8.2 -4.08216 | TCATTGGCGGCAAAA CCGCCG AAAA CGACGG AATGCACCGCGCCGA Smed_3197 3370993 - 3370334 - | alanine racemase domain-containing protein TERM 2837 3371546 - 3371516 - g 86 -12.7 -4.07885 | CATGCCGGCGGAAAA CGCCGCGATGGA-GC GCG GCGTCCATC-CGGCG AGCTGGACGTACCAG TERM 2838 3372880 - 3372920 + G 91 -9.1 -4.56597 | gap 1, opp_overlap 3372888 TCGACCAGTATATCG GCG-GAATAGAGCACGCG ATTCTC CACCTGCTCTATTCGCGC TTTTTCACGCGCGCG leuS 3371250 - 3373880 + | leucyl-tRNA synthetase TERM 2839 3374348 - 3374324 - g 71 -12.9 -3.04501 | overlap 3374314 AGGAATTCGCCAAGA TTCGCGCCATC CGC GATGGCGAGAA TCGCGCCGCGAAGGA Smed_3199 3373867 - 3374412 + | hypothetical protein holA 3374425 - 3375456 + | DNA polymerase III subunit delta Smed_3201 3376381 - 3375491 - | parB-like partition protein Smed_3202 3377208 - 3376414 - | cobyrinic acid ac-diamide synthase gidB 3377864 - 3377223 - | glucose-inhibited division protein B TERM 2840 3377380 - 3377367 - G 81 -2.3 -5.14563 | overlap 3377347 CCCTTTATGAAAAAA CGCGA TGGT TCGGG ATGCTTCGACTGTCA TERM 2841 3377510 - 3377555 + g 86 -8.1 -4.58786 | gap 1, overlap 3377511 3377544 GAATCGGATGGACGG TCCCCCTTGCAGCG-GTCTCGC GAA GCGCGACTCGCAGAAAGGCGGC TTTCTTGTTGTTGCT TERM 2842 3377511 - 3377554 + g 72 -11.6 -3.33645 | gap 1, overlap 3377510 3377544 AATCGGATGGACGGT CCCCCTTGCAGCG-GTCTCGC GAA GCGCGACTCGCAGAAAGGCGG CTTTCTTGTTGTTGC Smed_3204 3379744 - 3377873 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 3381184 - 3379862 - | tRNA modification GTPase TrmE TERM 2843 3381507 - 3381535 + r 73 -12.4 -3.14683 | overlap 3381510 AATGGGGAGAGGTAC CGGCAGGCGGCA AAAGC TGCCGCCTGTGG TTCATGCGCCGCTGT TERM 2844 3381510 - 3381532 + r 83 -14.9 -2.77899 | overlap 3381507 GGGGAGAGGTACCGG CAGGCGGCA AAAGC TGCCGCCTG TGGTTCATGCGCCGC rho 3382841 - 3381576 - | transcription termination factor Rho TERM 2845 3382699 - 3382711 + g 72 -7.7 -4.11216 | ATGATCTCGATCTCC TGCTG AGC CAGCA TTTTGAGGATCGCGA Smed_3207 3383579 - 3383037 - | hypothetical protein TERM 2846 3383212 - 3383198 - G 77 -4.2 -4.91109 | overlap 3383207 3383209 TGGTCAGCAGAAAAA CGCAGA AAA TCTTCG CATGGAGCCACCCCC hemE 3384607 - 3383576 - | uroporphyrinogen decarboxylase TERM 2847 3383837 - 3383795 - G 72 -13.5 -2.70932 | gap 1, opp_overlap 3383797 3383797 3383829, overlap 3383797 CTCCGCTGCGAAGGA GAGCGGCACCGAC-CAATCG AGGC CGATTGCGTCCGCGCCGGTC GCTTGCCGATAGTTC TERM 2848 3385281 - 3385307 + G 86 -7.2 -4.69664 | overlap 3385282 TCGGCGTCCCTTGCG TCTCGGTGCTCG ACC CGATCATCGAGC TTTTTCAATCCTATC TERM 2849 3385282 - 3385306 + G 71 -10.7 -3.41075 | overlap 3385281 CGGCGTCCCTTGCGT CTCGGTGCTCG ACC CGATCATCGAG CTTTTTCAATCCTAT TERM 2850 3385822 - 3385794 - g 71 -13.1 -3.10344 | GTTCGATCGAAGAGA CGGCCGCAGCG ATCGTTG CCCTGCGGCCG CGGCTCAGATAGAGC Smed_3209 3385013 - 3385834 + | hypothetical protein Smed_3210 3385891 - 3386490 + | Maf-like protein aroE 3386483 - 3387343 + | shikimate 5-dehydrogenase coaE 3387340 - 3387924 + | dephospho-CoA kinase TERM 2851 3388132 - 3388088 - g 76 -10.8 -3.70902 | gap 2, overlap 3388070 3388091 TCTTCGATACGGAAA CGACCGGTCTCGACAACCGCGA GGA CCG-GGTCATCGAGATCGG-CG GAATCGAGCTCGAGA TERM 2852 3388761 - 3388747 - g 76 -8.6 -4.14472 | GCAATATGGGCAAAA TTCAGC GAA GCTGAA GATATCCTGAGATCG Smed_3213 3388060 - 3388788 + | DNA polymerase III subunit epsilon TERM 2853 3388867 - 3388855 - T 75 -9.1 -4.07568 | opp_overlap 3388855 3388859 CTGCCCGTGGCAAAA CGGTG GAG CACCG TTCCTATTTGCGAAC TERM 2854 3388934 - 3388902 - T 87 -17.1 -2.78384 | opp_overlap 3388909, overlap 3388909 TGTGCGGGCACGATA CAAAAAACCCGGCTC GCT GAGCCGGGTTTTGCG GATATTTCAAAGCGG TERM 2855 3388927 - 3388909 - T 100 -16 -5.39721 | opp_overlap 3388909, overlap 3388902 GCACGATACAAAAAA CCCGGCTC GCT GAGCCGGG TTTTGCGGATATTTC TERM 2856 3388909 - 3388927 + T 100 -16 -4.15543 | opp_overlap 3388909 3388902 GCACGATACAAAAAA CCCGGCTC GCT GAGCCGGG TTTTGCGGATATTTC Smed_3214 3389456 - 3388950 - | preprotein translocase subunit SecB Smed_3215 3390097 - 3389549 - | FxsA cytoplasmic membrane protein Smed_3216 3390232 - 3390936 + | import inner membrane translocase subunit Tim44 TERM 2857 3391146 - 3391168 + G 78 -3.2 -5.0133 | overlap 3391150 GCGGGTGGGGATTTC GCCAATGCGG CGG CCGCACGTGC TTTTTTCGAGGCCTG Smed_3217 3390954 - 3392072 + | MltA domain-containing protein Smed_3218 3392065 - 3392640 + | Smr protein/MutS2 Smed_3219 3392624 - 3393001 + | XRE family transcriptional regulator gyrB 3393136 - 3395571 + | DNA gyrase subunit B TERM 2858 3395594 - 3395648 + T 83 -15.1 -2.73542 | gap 1, opp_overlap 3395608 3395610, overlap 3395580 3395610 TTCCAGCAAGCGGCT GC-ATAGCTTCGAAAGAGCAGGGCGG ATCT CCGTCCTGCTTTTTCGTCGCTACGGC TCATTCGCCCTTGAA TERM 2859 3395631 - 3395610 - T 73 -11.5 -3.36073 | opp_overlap 3395594 3395610, overlap 3395608 CATAGCTTCGAAAGA GCAGGGCGG ATCT CCGTCCTGC TTTTTCGTCGCTACG TERM 2860 3395610 - 3395631 + T 100 -13.7 -4.7497 | opp_overlap 3395610 3395608, overlap 3395594 CATAGCTTCGAAAGA GCAGGGCGG ATCT CCGTCCTGC TTTTTCGTCGCTACG Smed_3221 3396245 - 3395649 - | nitroreductase TERM 2861 3397338 - 3397352 + G 82 -11.4 -4.08064 | ATCTATGTGCAGGAG GGCGTC TAC GACGCC TTTTCCAGGAAGCTT Smed_3222 3396441 - 3397895 + | succinic semialdehyde dehydrogenase TERM 2862 3397919 - 3397942 + F 100 -16 -5.54907 | opp_overlap 3397919 3397914 GCCCATCAAAGCCAA GCCGGCCGGA AAGT TCTGGCCGGC TTTTTCTTTTGTCGG TERM 2863 3397942 - 3397919 - f 82 -13.8 -3.30701 | opp_overlap 3397919, overlap 3397914 GCCCATCAAAGCCAA GCCGGCCGGA AAGT TCTGGCCGGC TTTTTCTTTTGTCGG Smed_3223 3398032 - 3398832 + | 2-dehydro-3-deoxyglucarate aldolase Smed_3224 3399711 - 3398833 - | GntR family transcriptional regulator TERM 2864 3400967 - 3401002 + G 76 -9.6 -4.05446 | AAAAATCGCTGGGTG CCGTCGCCAAGGGCGG CCGA TCGCCTTTGACGGCCG TTTATAATTACGCGG Smed_3225 3399877 - 3401382 + | Altronate dehydratase TERM 2865 3401595 - 3401646 + G 71 -9.2 -3.72576 | gap 1 CAGGGATCCGCTATT TCGACACCGCGCCGTTCTACG-GGC TCG GCCTTGCCGAGCGGCGCGTCGGCGA TTTCCTGCGCGACAA TERM 2866 3402281 - 3402259 - g 74 -12.6 -3.30124 | GCGCATCGCCGAGAA GCGCGGCACG CCG CTCGCCGCGC AGGCCATGCAGTTTC Smed_3226 3401447 - 3402466 + | pyridoxal 4-dehydrogenase Smed_3227 3402576 - 3403565 + | periplasmic binding protein/LacI transcriptional regulator TERM 2867 3403578 - 3403604 + F 90 -12.2 -4.1673 | opp_overlap 3403577 3403573 3403572 3403578 TGACGAAAAGGAAAT GCGCGGCGCTGT ACG GCAGAGTCGCGC TTTCTTCCGCAATTC TERM 2868 3403806 - 3403793 - g 74 -2.4 -4.82901 | CGGCCTGCAGAAAAA CTAC GGTGCG GTAG AGGCGCTGAAACCCG Smed_3228 3403680 - 3405233 + | ABC transporter related Smed_3229 3405270 - 3406244 + | monosaccharide-transporting ATPase Smed_3230 3406291 - 3407307 + | alcohol dehydrogenase TERM 2869 3407322 - 3407356 + T 74 -7.1 -4.3739 | gap 1 GCCAGGCCGTCGCCA TCGGC-ACCTGCTTGC CGCC GCATGCAGGGCGTCGA TTTTGTCCGGCCATA Smed_3231 3407679 - 3407395 - | plasmid stabilization system protein TERM 2870 3407663 - 3407635 - G 73 -8.7 -4.08216 | overlap 3407636 CGATGTGCGTGAAAA TGCCGTCGCGGTC GAG GAGCGCGAAGGCG GACCATACGAGATCA Smed_3232 3407984 - 3407676 - | addiction module antitoxin Smed_3233 3408216 - 3409490 + | polyhydroxyalkanoate depolymerase, intracellular Smed_3234 3409681 - 3410106 + | hypothetical protein TERM 2871 3410153 - 3410178 + F 93 -17.7 -3.17797 | GCCATCCCGTCATGA TCCGGCGTTTC ATGT GAAACGCCGGA TTGCCTATGTCTACC TERM 2872 3410378 - 3410429 + G 79 -10.9 -3.85817 | gap 2 CGAGCCCGGTGGCAG GGCGCTGAAGCTCACCGTGCCGGAA GGTC TGCCGGAGCG-TGAGGT-CAGCGCC TTTCTCACCCGCCAT Smed_3235 3410229 - 3410984 + | hypothetical protein TERM 2873 3411060 - 3411045 - f 78 -6 -4.56597 | TGGTTCGTCGAAAAA CGCCGG GTGC CCGCCG CCGCATTCTTCCTAA TERM 2874 3411204 - 3411223 + G 74 -2.1 -4.84673 | gap 1, overlap 3411178 CAACGTGCCGTTGCG CTCG-GTG CTTCC CACACGGG TTTTATCTTCTTTCC Smed_3236 3411141 - 3411788 + | N-(5'-phosphoribosyl)anthranilate isomerase Smed_3237 3411810 - 3413030 + | tryptophan synthase subunit beta trpA 3413036 - 3413875 + | tryptophan synthase subunit alpha Smed_3239 3413929 - 3414843 + | acetyl-CoA carboxylase subunit beta TERM 2875 3414901 - 3414933 + F 73 -12.8 -2.83894 | gap 1, opp_overlap 3414895 3414896, overlap 3414904 TGATTTAAAGTGTGA GATCCGGATGCGCGC CTGC GCGCGCATCCC-ATC TGTCCTCATCCTGCT TERM 2876 3415138 - 3415175 + G 71 -13.6 -2.57931 | opp_overlap 3415107 3415142, overlap 3415137 3415149 TTCACGTCGCGGGGA CGAACGGCA-AGGGCTCG GTCA CG-GCCTTCTGCCGTTCG ATTCTGGAGGCTGCG Smed_3240 3414978 - 3416321 + | FolC bifunctional protein TERM 2877 3416415 - 3416431 + T 85 -15.1 -3.15663 | opp_overlap 3416415, overlap 3416429 TGCCCGAAAGAAAAA GCCCGGC CAA GCCGGGC TTCGTACGCCTGCGT TERM 2878 3416431 - 3416415 - T 100 -15.1 -5.27335 | opp_overlap 3416415 3416429 TGCCCGAAAGAAAAA GCCCGGC CAA GCCGGGC TTCGTACGCCTGCGT Smed_3241 3416786 - 3416463 - | thioredoxin Smed_3242 3420437 - 3416868 - | double-strand break repair helicase AddA TERM 2879 3418123 - 3418105 - G 81 -7.4 -4.52857 | opp_overlap 3418109 AGCGTCGAGATAAAA GCCTGC AGGCCAG GCAGGC CGCTCCTTTCGTGAT TERM 2880 3419103 - 3419084 - G 91 -9.2 -4.62069 | overlap 3419085 CGCCGACTGCAAAAA TCGTGCGG TCGT CCGCACGC GCCGTATCGCCGGCG TERM 2881 3419102 - 3419085 - G 74 -12.7 -3.3692 | overlap 3419084 GCCGACTGCAAAAAT CGTGCGG TCGT CCGCACG CGCCGTATCGCCGGC TERM 2882 3419982 - 3419971 - G 72 -2.2 -4.78149 | TCGAGAACGGAAAAA TGCC CGGC GACA TTGGCCTCCAGCGGG TERM 2883 3420125 - 3420140 + g 72 -4 -4.56597 | gap 1, overlap 3420124 3420125 3420126 CCGGTCGCTTGCCTT C-GATCG CCT CGATCCG TTTTTCGAGCGCAGC Smed_3243 3423606 - 3420427 - | double-strand break repair protein AddB TERM 2884 3420814 - 3420786 - G 73 -8.1 -4.07568 | gap 1, opp_overlap 3420771, overlap 3420789 GTTGCGGGTCTAAAA GAGCC-CGCGCC TCCTTC GGCGAGGGGCTC GATCCGGTTTTGTAG TERM 2885 3420960 - 3420948 - G 70 -10.5 -3.59315 | TGAAGGATCGTGAAA CGCCG CGC CGGCG CTCCCGTTCCCAGCC TERM 2886 3423494 - 3423465 - G 73 -6.9 -4.25104 | opp_overlap 3423465 3423469, overlap 3423466 GGGTCGGCACGAAAA TCGTGACGCCGGC GAGC GCCAGCGGCTCGG TTGGATCGTAGCGGA Smed_3244 3424339 - 3423608 - | nucleotidyl transferase Smed_3245 3425860 - 3424346 - | hypothetical protein Smed_3246 3428350 - 3425870 - | histidine kinase TERM 2887 3426463 - 3426477 + g 73 -8.5 -4.08767 | GGCGCTCGTTGAGTT CGCCG AAGAC CGGCG TTTTCAGAAGGTCGG TERM 2888 3427841 - 3427882 + g 100 -13 -4.59773 | overlap 3427843 3427845 CTGGGTCTCGAGCAC GAGGTCGAAGCTTTGCGC CTGGGC GCGCAGAGCCTCGATCGC TTTTTCGAGCTGCCC TERM 2889 3427843 - 3427880 + g 74 -14.2 -2.61004 | overlap 3427841 3427845 GGGTCTCGAGCACGA GGTCGAAGCTTTGCGC CTGGGC GCGCAGAGCCTCGATC GCTTTTTCGAGCTGC TERM 2890 3427845 - 3427878 + g 70 -13.2 -2.84171 | overlap 3427843 3427841 GTCTCGAGCACGAGG TCGAAGCTTTGCGC CTGGGC GCGCAGAGCCTCGA TCGCTTTTTCGAGCT TERM 2891 3428625 - 3428593 - R 100 -17.8 -5.00616 | opp_overlap 3428579 3428590 GTGCGGCCCAAAAAA GCGGCCGCGATCTC TTGTC AAGATCGCGGCCAC AACATGTTGTGGATT Smed_3247 3430054 - 3428654 - | S-adenosyl-L-homocysteine hydrolase TERM 2892 3429785 - 3429760 - G 81 -10.3 -4.11216 | opp_overlap 3429762 3429768 CCTTGACGGCGAAAA CGGGAACGCCG CTCG CGGCGATCGCG GCTGCGGCGTGGTCC TERM 2893 3430200 - 3430179 - R 78 -8.9 -4.19678 | opp_overlap 3430179 GGAGAGGGCAATAAA CATATAAAG ACGT CTTTATATG TTTATATCGCTCATA TERM 2894 3430179 - 3430200 + r 75 -8.9 -4.07124 | opp_overlap 3430179 GGAGAGGGCAATAAA CATATAAAG ACGT CTTTATATG TTTATATCGCTCATA Smed_3248 3430504 - 3430211 - | phosphotransferase system, phosphocarrier protein HPr TERM 2895 3430324 - 3430300 - G 75 -3.5 -4.82901 | gap 1, overlap 3430302 TGGCGGTCACAAAAA CCGTGCAGCC GGTGCT GGCCGC-CAG CATCATCAGCCCCAT Smed_3249 3430902 - 3430501 - | PTS system fructose subfamily IIA component TERM 2896 3431046 - 3431034 - R 83 -7.7 -4.66264 | opp_overlap 3431033 3431034 3431045 CAAAATGCCGAAAAA GCAGT CGC ACTGC CTTTTGATAAGGCTT Smed_3250 3431552 - 3431067 - | HPr kinase Smed_3251 3433285 - 3431549 - | integral membrane sensor signal transduction histidine kinase Smed_3252 3434198 - 3433476 - | two component transcriptional regulator TERM 2897 3433695 - 3433719 + g 78 -6.3 -4.59773 | opp_overlap 3433693, overlap 3433699 3433700 CAGGATCAGGAATTC CGTGACCGTCA GCG TGACGGATTCG TTTTTCCAGGTGCAG TERM 2898 3434247 - 3434283 + H 87 -14.3 -3.39142 | opp_overlap 3434247 3434258 GTATGCTTCAAGCCA CGCTTCGAGAATCGCGG CAA CCGCGAGTCACGGCGCG TTACTTGAGTATAAA TERM 2899 3434272 - 3434258 - H 71 -11.4 -3.29511 | opp_overlap 3434247, overlap 3434247 GCCACGCTTCGAGAA TCGCGG CAA CCGCGA GTCACGGCGCGTTAC Smed_3253 3434539 - 3436149 + | phosphoenolpyruvate carboxykinase TERM 2900 3436173 - 3436204 + F 83 -15.2 -2.78349 | opp_overlap 3436179, overlap 3436179 CTTGCCTTGATTCAC GTGAAACCCGGTCG CTTG CGGCCGGGTTTTGC ATTTGCGGCTTGTTT TERM 2901 3436198 - 3436179 - f 71 -10.6 -3.61178 | opp_overlap 3436173 3436179 TTGATTCACGTGAAA CCCGGTCG CTTG CGGCCGGG TTTTGCATTTGCGGC TERM 2902 3436179 - 3436198 + F 93 -12.8 -4.35524 | opp_overlap 3436179, overlap 3436173 TTGATTCACGTGAAA CCCGGTCG CTTG CGGCCGGG TTTTGCATTTGCGGC Smed_3254 3436255 - 3436689 + | hypothetical protein Smed_3255 3436779 - 3437252 + | hypothetical protein Smed_3256 3437367 - 3437978 + | 2OG-Fe(II) oxygenase TERM 2903 3438114 - 3438138 + T 74 -7 -4.30576 | overlap 3438115 CTAAGATAGAGCGGA ATGCGGGCGG ACAAA CCGCGCGCAC TTTTCCTCATCCCGC Smed_3257 3439150 - 3438155 - | pantothenate kinase TERM 2904 3438794 - 3438849 + g 71 -4.6 -4.39287 | gap 2, opp_overlap 3438790, overlap 3438839 CTCTGCAAGAATGCG CGCCG-TCGTCG-ATTTGCCGACGGC GACGGA GCCGGCGACGCCTATGACGAACGGCG TTTTCGTCTCGTTCG hisE 3439470 - 3439147 - | phosphoribosyl-ATP pyrophosphatase TERM 2905 3439301 - 3439328 + g 86 -15.6 -3.55801 | overlap 3439316 3439326 TCGACCAGATTCTTC CGGTCATCGCCG ATCG CCGCGATGACCG TTTCGACGGCTTCCT Smed_3259 3440271 - 3439495 - | imidazole glycerol phosphate synthase subunit HisF Smed_3260 3441014 - 3440268 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 2906 3441050 - 3441035 - R 76 -3.2 -4.91109 | overlap 3441038 GTCCGATCAGAAAAA TGACGC TGCA GCTTCA GGGCTTCCAGCGCAG hisH 3441698 - 3441048 - | imidazole glycerol phosphate synthase subunit HisH Smed_3262 3442174 - 3441698 - | hypothetical protein TERM 2907 3441736 - 3441725 - G 70 -7.2 -3.98075 | opp_overlap 3441725, overlap 3441726 ATAGGATTGAAAGAA GCCG AGCC CGGC TGTGTCGCCCAGGCG hisB 3442809 - 3442201 - | imidazoleglycerol-phosphate dehydratase Smed_3264 3443126 - 3443683 + | ATP-dependent protease peptidase subunit TERM 2908 3444079 - 3444035 - g 82 -11.5 -4.09511 | gap 1, opp_overlap 3444076 AAGACTGTTCGAAAA CGGCG-CTGCCCGCATCG TCATCGACCC CGATGCCGGCAATCGCCG CGCCGTCCGCGCCTA Smed_3265 3443673 - 3444191 + | GCN5-related N-acetyltransferase TERM 2909 3444737 - 3444696 - g 73 -11.3 -3.53811 | opp_overlap 3444722 TCGATGTCGCGGAAA CCGGCAACCCCGGCGGCGC CTTC GAGATTCCGGGGATGCCGG GCGCCAATATCGGCG hslU 3444191 - 3445498 + | ATP-dependent protease ATP-binding subunit TERM 2910 3445536 - 3445566 + F 100 -14.1 -5.24531 | gap 1, opp_overlap 3445533, overlap 3445539 TCGATCACCGAATTG TG-GGGCGCCTGTC ACTC GACAGGCGCCTTCA TTTTTTCTAGACCGT TERM 2911 3445539 - 3445562 + F 100 -18.2 -3.99236 | opp_overlap 3445533, overlap 3445536 ATCACCGAATTGTGG GGCGCCTGTC ACTC GACAGGCGCC TTCATTTTTTCTAGA Smed_3267 3445687 - 3446637 + | hypothetical protein TERM 2912 3446849 - 3446880 + F 74 -14 -2.62184 | gap 1, opp_overlap 3446842 GGAATCGATCACGTT C-ATGTTTTAGGTCC ACC GGACCTAAAACATCG TGATCTGAGAAAGGC Smed_3268 3446902 - 3448302 + | cytochrome P450 TERM 2913 3449260 - 3449286 + G 73 -11.5 -3.54741 | opp_overlap 3449246 3449245 3449247, overlap 3449253 GGCCGGCCGCGCCTC GACGCCGACGG AGCTG TCGTCGGCGGC TTTCGCACCATGGTC TERM 2914 3450265 - 3450242 - g 70 -8 -4.07568 | GCCGCCGCGCGAAAA CGATGGCGCT CGAG AGCGCCCGCG CGAACGGTGCAGAGG Smed_3269 3448396 - 3450399 + | hydantoinase/oxoprolinase TERM 2915 3450473 - 3450495 + F 78 -8.4 -4.11692 | gap 1, overlap 3450472 3450480 3450481 3450485 GGTGGGAGATTTTCC GCGCG-CGC GAGCGG GCGACGCGC TTTTCGAAGTGCATC TERM 2916 3450902 - 3450867 - g 80 -14.8 -3.12351 | gap 1, opp_overlap 3450866 3450868 CGTCTCGACAGCCAA TGTCGATCCGGAGATCG CCA CGATCGCCGGACCG-CA GCTTGTCGTGCCTGT TERM 2917 3451304 - 3451334 + G 70 -12.6 -2.9675 | overlap 3451317 ATCCGACGACTCCGA TCGGCAAGGCCG ATGCTGC CGGCATTGCCGA TATCATTCTCGAATC Smed_3270 3450562 - 3452736 + | malate synthase G TERM 2918 3452815 - 3452782 - T 100 -16.7 -3.73068 | overlap 3452786 GCTTCAAGCCAATAA GAAAGGGCCGTCGGC ATTC ACCGGCGGCCCTCTC CACTTCCGGCCCAAA TERM 2919 3452811 - 3452786 - T 100 -13.9 -4.4846 | overlap 3452782 CAAGCCAATAAGAAA GGGCCGTCGGC ATTC ACCGGCGGCCC TCTCCACTTCCGGCC Smed_3271 3453508 - 3452834 - | ErfK/YbiS/YcfS/YnhG family protein Smed_3272 3453704 - 3454228 + | hypothetical protein Smed_3273 3454849 - 3454265 - | two component Fis family transcriptional regulator Smed_3274 3456328 - 3455027 - | integral membrane sensor signal transduction histidine kinase TERM 2920 3456107 - 3456087 - G 70 -10.3 -3.58343 | CCGAGCAGGGCGAAA GCGGCCGGC GGC GTCAGCCGC TGCGTAGGCGGAAAC TERM 2921 3456343 - 3456369 + r 86 -14.5 -3.21099 | gap 1, overlap 3456346 TGCGTTTCCATTCCG C-GATGCGGCCG CATG CGGCCGCATCAG TTCGTCCTACCGAAC TERM 2922 3456346 - 3456365 + r 81 -15 -2.57795 | overlap 3456343 GTTTCCATTCCGCGA TGCGGCCG CATG CGGCCGCA TCAGTTCGTCCTACC Smed_3275 3458882 - 3456417 - | ATP-dependent helicase HrpB TERM 2923 3457386 - 3457398 + g 70 -10.5 -3.67597 | TCCAGGCAGAGCTGC GCCGG AGG CCGGC TTCTTCGATGCGCCG TERM 2924 3458385 - 3458351 - G 73 -8.5 -4.07568 | opp_overlap 3458359 CTTCGCTTTTCAAAA CGAGCGCGTCGCC CATCATGCC GGCGATGCGTTCG ACGTCGAGCGTTGCG Smed_3276 3459562 - 3458879 - | ABC transporter related TERM 2925 3459035 - 3458995 - G 78 -3.2 -5.00616 | overlap 3458998 TTGCCTTCGAAAAAA CGAGTTCG-CGCGTCTGCTC CCT GAGC-GCCGCATCGAGCTTG GAGAAAGGTTCGTCG Smed_3277 3461260 - 3459563 - | putative permease ABC transporter protein Smed_3278 3462470 - 3461244 - | hypothetical protein TERM 2926 3461654 - 3461670 + g 81 -13.7 -3.55487 | opp_overlap 3461645 CGAAGATGATGTCGA GCTCGCC GTC GGCGAGC TTCTGCTTCATGTCC TERM 2927 3462747 - 3462763 + r 86 -5.2 -5.10029 | TTCAAAAACAGCCAC TTACGA TTTTC TCGTAA TTTTTTGAAATTGGT TERM 2928 3465645 - 3465667 + r 70 -4.1 -4.62783 | ATGGCATCTGATTGG CTCGGTTGT AAAAG GTAACCGGG TTTTTGGGCTGGCTG TERM 2929 3467199 - 3467183 - R 71 -8 -4.08546 | overlap 3467185 3467186 ATGAGTAACGATAAA GAGGGT GAGAG ACCCTC TCGCCGAAAGACCAA TERM 2930 3467587 - 3467574 - R 76 -4.5 -4.7254 | ACTGTTTATCAAAAA CACAG GGCT CTGCG AAGTCGCAAGACGAC TERM 2931 3468847 - 3468833 - R 83 -5 -5.07652 | GTGTTCAAAACAAAA GAAGTC AAA AACTTC ACCAGCTTCTCGATT TERM 2932 3468867 - 3468887 + r 83 -14.1 -3.12668 | opp_overlap 3468867, overlap 3468859 GCTTCTCGATTGAAA TTTGCTCCC GCC GGGAGCAAA TCTTGCGCTTTGCCG TERM 2933 3468887 - 3468867 - R 95 -14.1 -3.64703 | opp_overlap 3468867 3468859 GCTTCTCGATTGAAA TTTGCTCCC GCC GGGAGCAAA TCTTGCGCTTTGCCG TERM 2934 3469221 - 3469206 - R 100 -11.8 -5.27477 | opp_overlap 3469206 ACGCCAAGCAAAAAA GCCCCC ATAC GGGGGC TTTTTGCGCTTCTGA TERM 2935 3469206 - 3469221 + r 100 -11.8 -4.6902 | opp_overlap 3469206 ACGCCAAGCAAAAAA GCCCCC ATAC GGGGGC TTTTTGCGCTTCTGA Smed_3279 3471963 - 3469459 - | multi-sensor hybrid histidine kinase TERM 2936 3469694 - 3469727 + g 86 -8.1 -4.67353 | gap 1, opp_overlap 3469693, overlap 3469721 TAATCGAAAGGAGAG GCGTCG-CGCAGCAGA TTC TCTGCTTCTTCGGCGC TTTTTGCCTCGATCA Smed_3280 3472685 - 3471960 - | two component transcriptional regulator Smed_3281 3472941 - 3473972 + | extracellular solute-binding protein TERM 2937 3473980 - 3474002 + F 83 -13.4 -3.53012 | opp_overlap 3473974 3473973 AAGAGTAATCTCAGC GTCCCGGACC ATC GGTGCGGGAC TTTCAGCAACAGGAA TERM 2938 3474375 - 3474332 - f 93 -8.6 -4.72272 | opp_overlap 3474358 GCTGCTGATCAAAAA TGCAGGGCGGGCAGCGGCGG AAGT CAGCCTCTGGCAACCCGGCA TGGGTGCGGGGGCCT TERM 2939 3475335 - 3475322 - f 75 -9.5 -3.83502 | overlap 3475331 GACGGTTACAGGAAA GGCCG ATAA CGGCC AGAACGCCGCGCTGA TERM 2940 3476839 - 3476827 - g 80 -6.2 -4.72986 | CATCGTGATGAAAAA CGCG GAGAT CGCG CAGGAAGGCACGCCA Smed_3284 3476195 - 3477247 + | ABC transporter related Smed_3285 3477499 - 3477266 - | hypothetical protein TERM 2941 3477438 - 3477423 - G 83 -6.8 -4.87893 | gap 1, overlap 3477424 3477425 AACGTCAAGCAAAAA GCCTCCG GAA CGG-GGC TCCGAAGATTGAAAC Smed_3286 3478060 - 3477527 - | sarcosine oxidase gamma subunit Smed_3287 3481016 - 3478053 - | sarcosine oxidase alpha subunit family protein TERM 2942 3479322 - 3479299 - G 78 -10.2 -4.03413 | opp_overlap 3479304 3479307 ACCGGCGTATAGAAA GGGCGGAACG TCGT CGTCCCGACC TCGGCAGGCGAGACG TERM 2943 3480501 - 3480525 + g 71 -11.3 -3.41051 | GCCGGCGCCGATGAC GAGCAGGTCGC AAT GCGCCCAGCTC TTCTCATAGGCGTCG Smed_3288 3481291 - 3481013 - | sarcosine oxidase delta subunit family protein TERM 2944 3481331 - 3481347 + r 82 -6.5 -4.72272 | AATCAGTGAAGGTTC GGCTGAG CGC CTTGGCC TTTTTCATCAAGGAG Smed_3289 3482568 - 3481318 - | sarcosine oxidase beta subunit family protein TERM 2945 3483492 - 3483439 - g 78 -15.9 -2.70932 | CCGGCTGTTCAAGGA GCATCGCGGAGCCGGGTTTCTCGAC ACTT ACCGGGAGATCCGGCTCCGCCACGC CCGAAGGCTCCTGCA Smed_3290 3482663 - 3483637 + | AraC family transcriptional regulator Smed_3291 3483737 - 3484642 + | glutamine amidotransferase class-II Smed_3292 3484678 - 3485364 + | glutamate synthase alpha subunit Smed_3293 3485380 - 3486708 + | ferredoxin-dependent glutamate synthase TERM 2946 3486720 - 3486747 + G 86 -12 -4.24404 | CTGAATGAAGAGTGG CAGGTCGCACTT GAGA GGGTGCGGCCTG TTTTCGCATTTGAGT TERM 2947 3487159 - 3487145 - g 73 -8.5 -4.07568 | opp_overlap 3487144 3487145 3487158 GGCTTCGCGTTAAAA CCGGC GTCGA GCCGG AATTTTTCCTGATCT Smed_3294 3486709 - 3488094 + | glutamine synthetase catalytic region TERM 2948 3488112 - 3488141 + T 70 -12.1 -2.83701 | opp_overlap 3488111 3488112, overlap 3488099 CGCGTGCAGGAAAAG CGTGCCGGCTGGA GCCC TTCGGCCTGCACG TCTACTGCATGTTTC TERM 2949 3488243 - 3488256 + T 70 -3.8 -4.57569 | opp_overlap 3488233, overlap 3488206 TATAAGACGCACGGC GCTG TAGTTT CAGC TTTTTCGGGCCATGA Smed_3295 3488515 - 3488252 - | hypothetical protein Smed_3296 3489287 - 3488550 - | putative signal peptide protein TERM 2950 3488732 - 3488706 - G 72 -7.9 -4.18018 | opp_overlap 3488706 3488728, overlap 3488728 CGCGGTGACGGAAAA GCGCGCCTGCC GCAGG AGCAGATGCGC CGCGCGTTGTCCTTC Smed_3297 3490810 - 3489413 - | amino acid permease-associated region Smed_3298 3490986 - 3490825 - | hypothetical protein Smed_3299 3491449 - 3491066 - | hypothetical protein Smed_3300 3491775 - 3491458 - | hypothetical protein TERM 2951 3492390 - 3492418 + G 74 -5.2 -4.58283 | gap 1 CGCTGCAGACGCTGT CGCGGGCACTCGG CGTA CCGA-TCACCGCG TTTTTCCGCCGCTTC TERM 2952 3492782 - 3492807 + G 73 -13.3 -3.11459 | TATCTGTCCATCATT TCCTATCCGCG CGGC CGCGGAGAGGA TTAGATCATGATGTT Smed_3301 3492107 - 3492811 + | XRE family transcriptional regulator Smed_3302 3493834 - 3492854 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Smed_3303 3494859 - 3493831 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 2953 3494495 - 3494529 + g 70 -10.1 -3.62775 | TCTATGGTCTGGTCG CCGATCGACCAGAC-CG GAT CGAGGCTGGTC-ATCGG TTCTTGGAAGATCAT TERM 2954 3494762 - 3494774 + g 75 -3.3 -4.87626 | opp_overlap 3494763, overlap 3494763 GCAATCGAAAAGGAA ACGTC ATC GACGC TTTTTACTGTTCCGC Smed_3304 3495865 - 3494864 - | binding-protein-dependent transport systems inner membrane component TERM 2955 3495445 - 3495435 - G 71 -8.2 -3.92075 | overlap 3495421 3495436 AGCGCCAGCCAGAAA GGCG GCA CGCC GACGCTGATGAAGGA Smed_3305 3496720 - 3495875 - | binding-protein-dependent transport systems inner membrane component TERM 2956 3496802 - 3496830 + r 90 -15.9 -3.53811 | GGCGGTCTCTCAGAT CCGGGGCGGGGGT CGG GTCCCCGCCCCCG TTTCGCCGGCCTCCG Smed_3306 3498555 - 3496870 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 2957 3497376 - 3497405 + g 74 -10.6 -3.737 | CCTGTCCCGTCGGCA GCGGCGTGCCGT CCGCCC AGGGCTCGCCGC TTTCCTCCCGGCTTC Smed_3307 3500617 - 3498596 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 2958 3499435 - 3499447 + g 80 -6.2 -4.74706 | opp_overlap 3499435 TGCCGACCGACTCAA GCGC TGCAC GCGC TTTTTCAATATTGAG TERM 2959 3500623 - 3500637 + r 74 -6.4 -4.41616 | GCGTTGCCATTCTTT CTTTCC TCC GGAGAG TTTATTTCGCCCAGT Smed_3308 3502225 - 3500639 - | extracellular solute-binding protein TERM 2960 3501825 - 3501812 - G 71 -9.5 -3.71848 | overlap 3501813 GTCTGTCAGGAAGAA CCGGC CGCA GCCGG CCATGTCAAGCACGC Smed_3309 3502836 - 3503465 + | XRE family transcriptional regulator purU 3503641 - 3504525 + | formyltetrahydrofolate deformylase Smed_3311 3504719 - 3505852 + | glycine cleavage T protein (aminomethyl transferase) Smed_3312 3505864 - 3506469 + | hypothetical protein Smed_3313 3506466 - 3507431 + | ferredoxin Smed_3314 3507542 - 3508582 + | hypothetical protein Smed_3315 3508630 - 3509967 + | flavin-containing monooxygenase FMO TERM 2961 3510033 - 3509991 - T 74 -11.3 -3.56099 | opp_overlap 3509984 3509994 3509995, overlap 3509992 GATAATCCCGCGAAA TCGCTTCGCCCTTCATCCG TATGC CGGATGAAGGGCGAAATTG TTTAGATCACGTTCA TERM 2962 3510032 - 3509992 - T 80 -14.8 -2.73338 | opp_overlap 3509984 3509994 3509995, overlap 3509991 ATAATCCCGCGAAAT CGCTTCGCCCTTCATCCG TATGC CGGATGAAGGGCGAAATT GTTTAGATCACGTTC TERM 2963 3509994 - 3510030 + T 100 -19.6 -3.96483 | opp_overlap 3509992 3509991, overlap 3509984 3509995 AATCCCGCGAAATCG CTTCGCCCTTCATCCG TATGC CGGATGAAGGGCGAAA TTGTTTAGATCACGT TERM 2964 3509995 - 3510029 + T 100 -23.1 -2.97408 | opp_overlap 3509992 3509991, overlap 3509984 3509994 ATCCCGCGAAATCGC TTCGCCCTTCATCCG TATGC CGGATGAAGGGCGAA ATTGTTTAGATCACG Smed_3316 3512454 - 3510085 - | glycine cleavage T protein (aminomethyl transferase) TERM 2965 3510139 - 3510150 + g 86 -7.2 -4.72986 | overlap 3510133 CAGCGGCACGACAGC CGCC GGCA GGCG TTTTTGCTGGCCGTC Smed_3317 3512684 - 3514468 + | amino acid permease-associated region TERM 2966 3514507 - 3514490 - T 100 -14.1 -4.62471 | opp_overlap 3514490 CCGAACGCGCAAAAA GGCCCGC TTCG GCGGGCC TTTTCATTCAGGGAT TERM 2967 3514490 - 3514507 + T 100 -14.1 -4.41047 | opp_overlap 3514490 CCGAACGCGCAAAAA GGCCCGC TTCG GCGGGCC TTTTCATTCAGGGAT TERM 2968 3516035 - 3515993 - T 89 -16.2 -3.40403 | overlap 3515995 TCTGCGGCAGCAGAA GAGCCTCCGCCTGCAGGC ACCTTCG GCCCGCAAGCGGCGGCGC CGTCAGAGAGCCTCA TERM 2969 3516033 - 3515995 - T 93 -17.4 -3.27475 | overlap 3515993 TGCGGCAGCAGAAGA GCCTCCGCCTGCAGGC ACCTTCG GCCCGCAAGCGGCGGC GCCGTCAGAGAGCCT TERM 2970 3516091 - 3516059 - T 72 -9.9 -3.66356 | gap 1 AGCCTCAATCCGAAA GCT-TCAGGGCCGC ATGCCG GCCGCCCTGATAGC GAACGCCTTTCGCGG Smed_3319 3516833 - 3516048 - | NAD-dependent epimerase/dehydratase Smed_3320 3518618 - 3516894 - | dihydroxy-acid dehydratase TERM 2971 3517330 - 3517361 + g 91 -15.2 -3.83102 | gap 1, opp_overlap 3517317, overlap 3517319 ATCATGACCGTGTCG GCGGTGA-CGTCGAG ATC CTCGTCGTTCACCGC TTTCATCATCGTTTC Smed_3321 3518696 - 3519418 + | GntR domain-containing protein Smed_3322 3519651 - 3520535 + | SMP-30/gluconolaconase/LRE domain-containing protein Smed_3323 3521197 - 3520556 - | glutathione S-transferase domain-containing protein Smed_3324 3522301 - 3521222 - | ABC transporter related Smed_3325 3523397 - 3522324 - | oxidoreductase domain-containing protein TERM 2972 3522975 - 3522989 + g 95 -10 -4.62475 | CTTTCCGGCAATGCC CGCATC GAT GATGCG TTTTGCTTTCTCGAT Smed_3326 3524415 - 3523399 - | oxidoreductase domain-containing protein TERM 2973 3523948 - 3523918 - G 100 -12.4 -4.56597 | GGCGCGCCGGAAAAA CCAGCCGGGCCGCG ACT CGCGCCGCAGCCGG TGCGGCCCGAGACCG Smed_3327 3525322 - 3524435 - | binding-protein-dependent transport systems inner membrane component Smed_3328 3526271 - 3525315 - | binding-protein-dependent transport systems inner membrane component Smed_3329 3527562 - 3526276 - | extracellular solute-binding protein TERM 2974 3526939 - 3526951 + g 76 -9.1 -4.07568 | GAGCGCCTTGCCGCG CTGGC GAA GCCAG TTTTCGAGCAGCGGC Smed_3330 3527751 - 3528428 + | TetR family transcriptional regulator Smed_3331 3528552 - 3529700 + | oxidoreductase domain-containing protein Smed_3332 3529704 - 3530867 + | hypothetical protein TERM 2975 3531369 - 3531338 - g 76 -9.2 -4.06687 | opp_overlap 3531344 3531366 AGCGGTCAGAAACAA CCTGCTCGGCGTCA GCGG CGTCGCCGCGCCGG ATCTCGCCGGTTTCG TERM 2976 3531742 - 3531755 + G 77 -2.3 -5.00616 | overlap 3531734 GTCTCAAGCGACTCC GGGCG TCGA TGCTC TTTTTTGAACAGCCG Smed_3333 3530877 - 3532298 + | hypothetical protein TERM 2977 3532502 - 3532518 + G 81 -4.3 -5.00616 | overlap 3532504 GGCTGAAGCTGACGG GGCTCTG CCG CGGAGGC TTTTTTCCGGCGCCG Smed_3334 3532318 - 3533151 + | xylose isomerase domain-containing protein Smed_3335 3533307 - 3534596 + | oxidoreductase domain-containing protein TERM 2978 3535083 - 3535066 - g 79 -9.1 -4.16943 | overlap 3535071 TGGCAGACGGCAAAA GGCAAGC TCAC GCTCGCC TGCGGCCTGAGCCTC TERM 2979 3536398 - 3536377 - g 70 -12.3 -3.14931 | gap 1 GCCATGCGCGATGAA CCGCGTGCGG ATG CCGCA-GCGG GCCTCAGAGCGCTCG Smed_3336 3534676 - 3536910 + | heavy metal translocating P-type ATPase TERM 2980 3537161 - 3537125 - f 78 -3 -5.12707 | gap 1, overlap 3537115 CCAAACGGTAAAAAA TTGCCGGC-ACGGTT TCTGGGTG AACCGAAGCGGGCAA ATAGGGGATCGCAGG Smed_3337 3537182 - 3538717 + | ABC transporter related Smed_3338 3538714 - 3539847 + | inner-membrane translocator Smed_3339 3539850 - 3540821 + | inner-membrane translocator TERM 2981 3541152 - 3541172 + G 82 -11.1 -4.07568 | opp_overlap 3541124 CCGCCCTGCGGCGGC TGCCGCCAG CGC CTGGCGGAA TTTTCCGGCGCCAGC Smed_3340 3540825 - 3541283 + | cytidine deaminase Smed_3341 3541280 - 3542077 + | purine nucleoside phosphorylase TERM 2982 3542135 - 3542151 + G 76 -11.5 -3.73402 | GGCGGCAGGCTCGTT CCGGCGG AGA TCGCCGG TTTCATCGAGGGTCT TERM 2983 3543033 - 3543048 + G 74 -10.4 -3.72576 | TCATGGTGCATCGGC TCGGCG GCCC CGCCGA TTTCGTGGAACGGCC TERM 2984 3543097 - 3543121 + G 74 -13.6 -2.87564 | gap 1 GGCGCCGGCGATCGT GCCGGTCGCGG CGGC CCGCGAC-GGC TATCTGGCCGCCTGC deoA 3542078 - 3543394 + | thymidine phosphorylase upp 3544054 - 3543425 - | uracil phosphoribosyltransferase Smed_3344 3545191 - 3544217 - | adenosine deaminase Smed_3345 3546408 - 3545188 - | phosphopentomutase Smed_3346 3547164 - 3546580 - | hypothetical protein Smed_3347 3547786 - 3547172 - | TadE family protein Smed_3348 3548377 - 3547955 - | hypothetical protein Smed_3349 3548629 - 3548814 + | Flp/Fap pilin component TERM 2985 3548802 - 3548822 + F 78 -3.9 -5.00616 | overlap 3548803 3548817 3548817 CAGCGTTGGAGAAGC TCCAGCG CCGTGAT CGCTGGC TTTTTTCCGAAAGGC TERM 2986 3548829 - 3548861 + F 100 -24.3 -3.04263 | opp_overlap 3548835, overlap 3548817 3548817 3548835 ATCGCTGGCTTTTTT CCGAAAGGCCGCCTT TTC GAGGCGGCCTTTCGG TGTTGCAGGTGACGT TERM 2987 3548835 - 3548855 + F 95 -14.7 -3.76373 | opp_overlap 3548835, overlap 3548817 3548817 3548829 GGCTTTTTTCCGAAA GGCCGCCTT TTC GAGGCGGCC TTTCGGTGTTGCAGG TERM 2988 3548855 - 3548835 - f 83 -14 -3.53012 | opp_overlap 3548817 3548817 3548835 3548829 GGCTTTTTTCCGAAA GGCCGCCT TTTCG AGGCGGCC TTTCGGTGTTGCAGG TERM 2989 3549222 - 3549244 + G 71 -8.4 -3.84406 | overlap 3549215 GTATGTCTCCGCCTT CGGCGGTC TGTTGAC GATCGCCG TTCTTCTCCTGCGCA Smed_3350 3548902 - 3549414 + | peptidase A24A prepilin type IV Smed_3351 3549564 - 3550373 + | SAF domain-containing protein Smed_3352 3550348 - 3551922 + | type II and III secretion system protein Smed_3353 3551931 - 3552659 + | pilus biogenesis lipoprotein CpaD TERM 2990 3553931 - 3553920 - g 72 -7.2 -4.15222 | opp_overlap 3553921 3553921, overlap 3553921 ACCGCCGCCAAGAAA GCCC GTCG GGGC GGCCTCGGCAAGGTT Smed_3354 3552684 - 3553970 + | response regulator receiver protein Smed_3355 3554032 - 3555498 + | type II secretion system protein E TERM 2991 3555688 - 3555669 - g 82 -2.8 -5.11836 | overlap 3555671 AGACCGAAAAGAAAA CCGAAG GCCGCCTG CTCCGG GTCAGCGCCGCCGAG Smed_3356 3555560 - 3556570 + | type II secretion system protein Smed_3357 3556584 - 3557567 + | type II secretion system protein Smed_3358 3558661 - 3557846 - | tetratricopeptide TPR_4 TERM 2992 3560111 - 3560157 + G 70 -7.2 -4.00782 | gap 2, opp_overlap 3560106 3560107, overlap 3560122 CTGGGCACAAGCCGA GCGTCCGCATTCGCCGGTCGGC GGCGA GGCG-CAGGCGA-TCCGGGCGC TTTATCATCATATCG Smed_3359 3558798 - 3560195 + | leucyl aminopeptidase Smed_3360 3560268 - 3560612 + | MarR family transcriptional regulator TERM 2993 3561037 - 3561049 + G 76 -10.5 -3.84183 | overlap 3561035 CGGGGAGACCGAGAC GCGCG GCA CGCGC TATTTTCTGCTGGAA Smed_3361 3560609 - 3561475 + | NLP/P60 protein Smed_3362 3562544 - 3561585 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Smed_3363 3564184 - 3562556 - | ABC transporter related TERM 2994 3564081 - 3564123 + g 91 -16.3 -3.5393 | opp_overlap 3564067 3564105, overlap 3564069 AGAGCGACGGTCTCG CCTCGCTTGATGTCGAACG AGATA CGATCGACGGCGAGCGAGG TTTCGCCGCCCTGGT Smed_3364 3565323 - 3564193 - | binding-protein-dependent transport systems inner membrane component TERM 2995 3564299 - 3564283 - G 78 -2.9 -5.07567 | opp_overlap 3564294 CGACATGGCAAAAAA GGCCG TCAATCC CAGCC AGGGCGCCTGCAGGT Smed_3365 3566405 - 3565323 - | binding-protein-dependent transport systems inner membrane component Smed_3366 3568445 - 3566586 - | extracellular solute-binding protein TERM 2996 3568630 - 3568606 - H 71 -12.7 -2.6891 | overlap 3568603 3568601 CAGGATAGGAGAGGA CGGCGGGCTGC GGC GCCGCGCGCCG TGTCAGAGGCGCAAA TERM 2997 3569540 - 3569517 - g 91 -9.4 -4.43911 | overlap 3569519 AAAGCCGAAGCAAAA GCCCGCTGCG AAGC CGCCGCGGCC GAAATTCGCGAAACT mepA 3568690 - 3569757 + | penicillin-insensitive murein endopeptidase mgsA 3570002 - 3570382 + | methylglyoxal synthase TERM 2998 3570646 - 3570623 - f 71 -7.4 -4.15143 | gap 1, opp_overlap 3570623 3570624, overlap 3570619 3570624 3570637 AAGCAAGGATATAAA TCGGG-CGCAT GAA ATGCGGCCCGC TTTACCCCGGACATC glk 3570692 - 3571711 + | glucokinase Smed_3370 3571820 - 3573625 + | ABC transporter related Smed_3371 3573660 - 3574478 + | dihydrodipicolinate reductase Smed_3372 3574506 - 3575141 + | phosphoglyceromutase Smed_3373 3576160 - 3575288 - | methylated-DNA--protein-cysteine methyltransferase TERM 2999 3575578 - 3575557 - G 74 -2.1 -4.91511 | overlap 3575539 3575538 3575559 AGCCGATCAGAAAAA TCCTCAGCG GCTC CTCCGCGGA CCACCGATCGGGGTC Smed_3374 3576737 - 3576240 - | hypothetical protein Smed_3375 3576850 - 3577560 + | endonuclease III Smed_3376 3578214 - 3577621 - | TetR family transcriptional regulator Smed_3377 3578283 - 3578708 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3000 3579049 - 3579025 - g 74 -12.8 -3.35522 | opp_overlap 3579013 3579023 3579026, overlap 3579013 3579023 GAAGCGCGGGAAATA CCGCGGCTGG TGTCG CCAGCCTCGG CGGACGGGCTGCGTA Smed_3378 3578835 - 3579827 + | ribokinase-like domain-containing protein Smed_3379 3580526 - 3579975 - | hypothetical protein Smed_3380 3580661 - 3581734 + | glyoxylate reductase Smed_3381 3584976 - 3581962 - | DNA polymerase I TERM 3001 3583713 - 3583699 - G 72 -7.8 -4.18494 | overlap 3583709 TATCGCCAGCGAAAA GCCGAC GAG ATCGGC GCGCATGGCGTCGGA TERM 3002 3584195 - 3584214 + g 72 -7.8 -4.16842 | opp_overlap 3584186, overlap 3584185 ATGAAGTCGTCGAGC GGCACGTC GAGC GGCGTGTC TTTCTTCAGCGTCAC TERM 3003 3584438 - 3584454 + g 72 -2.1 -4.75174 | overlap 3584440 AGATCGATCATCTTT TCCGGCG GCA CGCCCCA TTTTTCGATTACGTC TERM 3004 3585296 - 3585266 - H 100 -22.6 -5.40072 | opp_overlap 3585266 CCGCTTTCAAAAAAA CCGTCACGGCGCCG CCT CCGCGCCGTGACGG TTTTTTATTGCCGGT TERM 3005 3585266 - 3585296 + H 100 -22.6 -5.45652 | opp_overlap 3585266 CCGCTTTCAAAAAAA CCGTCACGGCGCCG CCT CCGCGCCGTGACGG TTTTTTATTGCCGGT Smed_3382 3585430 - 3585873 + | MarR family transcriptional regulator TERM 3006 3586577 - 3586627 + G 72 -11.7 -3.35597 | overlap 3586575 GGCCTGCGCGGCCTT GTCGGCGAGGAGGTCACGATCAG GGCGG CGGATCGCGACCTGCACTCCGGC TATTTCGGCGGTGCG Smed_3383 3585956 - 3587347 + | hypothetical protein TERM 3007 3588226 - 3588238 + G 71 -9.1 -3.68351 | GGCGGGCTCATTCTG GCGCT CAT AGCGC TTTACGTGCTCGGCA Smed_3384 3587713 - 3588660 + | hypothetical protein Smed_3385 3589203 - 3588712 - | putative signal peptide protein Smed_3386 3590205 - 3589318 - | hypothetical protein TERM 3008 3590064 - 3590029 - G 79 -14 -3.53224 | gap 1, overlap 3590030 CATTGTCGCGGCAAA CCCGCC-CGGTGCCCGC GCC GCGAGCACCGCGGCAAA GCCGGCAAAGGCCCA TERM 3009 3590063 - 3590030 - G 78 -15.3 -2.71791 | gap 1, overlap 3590029 ATTGTCGCGGCAAAC CCGCC-CGGTGCCCGC GCC GCGAGCACCGCGGCAA AGCCGGCAAAGGCCC TERM 3010 3590335 - 3590304 - R 100 -14.5 -4.12532 | opp_overlap 3590306 TGCCTGATACAGAAA GACCCCGAGCC GGGAGGAGGT GGCTCGGGGTC TTAAACCTGATCGGT TERM 3011 3590306 - 3590333 + r 73 -12 -3.04792 | opp_overlap 3590304 CCTGATACAGAAAGA CCCCGAGCCG GGAGGAGG TGGCTCGGGG TCTTAAACCTGATCG Smed_3387 3590925 - 3590494 - | pyrimidine dimer DNA glycosylase TERM 3012 3591385 - 3591361 - g 100 -12.7 -4.91712 | GCCAAGGGAGAAAAA CGCGCCAGGCG TGC CGGCGGGCGCG GCTCCGGCAAAAGCG TERM 3013 3591841 - 3591798 - g 100 -13.8 -4.57569 | opp_overlap 3591837, overlap 3591835 GCAGCTTGCCAAAAA CCTGTTCCTCTCGCCGGAGC GCAC GCTCGAGCGAAAGGTGCAGG AGGTGCTGCTCGCTT Smed_3388 3591205 - 3593457 + | 1A family penicillin-binding protein TERM 3014 3595301 - 3595285 - g 70 -10.1 -3.66844 | opp_overlap 3595281 3595285 CGTAGAGGCCAAGAA CCAGGCC GAA AGCCTGG TTCATTCCTCGGAGA Smed_3389 3593690 - 3595615 + | molecular chaperone DnaK TERM 3015 3595640 - 3595659 + F 100 -15 -4.7497 | opp_overlap 3595639 CGTTTCGTCGAACAG GCCCGGGA GCGA TCCCGGGC TTTTTCATAGGTGGC Smed_3390 3595879 - 3597006 + | chaperone protein DnaJ Smed_3391 3598046 - 3597180 - | hypothetical protein TERM 3016 3597353 - 3597341 - G 73 -6.9 -4.25256 | CGCCGACGAAAAGAA GCGCC ATC AGCGC CCAGCAGCAGCCGAC TERM 3017 3597671 - 3597655 - G 76 -6.5 -4.41348 | opp_overlap 3597654 3597655 3597663 CCCCCGGCAAAGAAA CCTGTCG CGG CGAAAGG CTTGTCCTCCTTTCG Smed_3392 3598685 - 3598050 - | hypothetical protein Smed_3393 3599805 - 3598801 - | phosphate transporter TERM 3018 3599235 - 3599193 - G 83 -9.3 -4.30995 | gap 1, opp_overlap 3599196, overlap 3599190 3599194 3599196 CTTGCGAGAAAAGAA GCACGGCAATGATGCCCA TGGTTTTC TGTGCATCATTGCCGC-C GTGGCCGAGCGAGTA TERM 3019 3599233 - 3599196 - G 80 -14.3 -3.14625 | opp_overlap 3599196, overlap 3599193 3599194 3599190 GCGAGAAAAGAAGCA CGGCAATGATGCCCA TGGTTTTC TGTGCATCATTGCCG CCGTGGCCGAGCGAG Smed_3394 3600449 - 3599805 - | hypothetical protein TERM 3020 3601246 - 3601297 + G 70 -10.2 -3.64599 | gap 2, opp_overlap 3601244 3601245 3601237, overlap 3601245 ATCGAACGCGAAATG GCCGGCCTCGGCATTTCCATGGCG CTTGCC CGCCA-GGAGATGCTC-GGCCTGC TTTCCGCTCTCGTCG recF 3600571 - 3601800 + | recombination protein F Smed_3396 3601840 - 3602616 + | molybdopterin biosynthesis protein MoeB Smed_3397 3603330 - 3602662 - | TetR family transcriptional regulator TERM 3021 3603383 - 3603352 - R 100 -21 -3.02461 | gap 1, opp_overlap 3603352, overlap 3603354 CAATTCTCCTTAACA GATGGCCCGCC-GCT GTA AGCCGGCGGGCCATC TTCTCCGATCACTCG TERM 3022 3603352 - 3603383 + r 100 -21 -3.33492 | gap 1, opp_overlap 3603352 3603354 CAATTCTCCTTAACA GATGGCCCGCC-GCT GTA AGCCGGCGGGCCATC TTCTCCGATCACTCG TERM 3023 3603381 - 3603354 - R 91 -17.8 -3.06815 | gap 1, opp_overlap 3603352, overlap 3603352 ATTCTCCTTAACAGA TGGCCCGCC-GCT GTA AGCCGGCGGGCCA TCTTCTCCGATCACT Smed_3398 3606538 - 3603392 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 3024 3604789 - 3604810 + g 78 -14.5 -3.09635 | CCTCCGTGGTGCGGT TTGCCGTCG CTTC CGACGGCAA TTGCATCATGACGAT TERM 3025 3605239 - 3605200 - G 79 -15.8 -2.86539 | gap 1, opp_overlap 3605207, overlap 3605183 3605197 CCGAAGCCAGAACCA GCG-TGATGCCGATCACCG CTC CGGTGATCTGCTTCATCGC CTTCCGGGTTGCATC TERM 3026 3605207 - 3605231 + g 80 -14.3 -3.18681 | opp_overlap 3605183 3605200 3605197 CAGAACCAGCGTGAT GCCGATCACCG CTC CGGTGATCTGC TTCATCGCCTTCCGG TERM 3027 3605504 - 3605488 - G 76 -13.7 -3.1829 | overlap 3605486 ACATCACCAGGAATA CGAGGCC GAC GGCCTCG ACAAGGGTGTGCAGC Smed_3399 3607769 - 3606549 - | RND family efflux transporter MFP subunit TERM 3028 3607820 - 3607779 - R 77 -12.3 -3.59262 | opp_overlap 3607785 GTCCATATTGTCAAA GGACCG-GCCGCAGCCGCG GCTTGT CGCAGC-GCTGCGCGGTCC GAAAGTGAGGTGAAG TERM 3029 3607982 - 3607953 - R 74 -7.7 -4.20875 | GAGCAAAAAATAGAA GAGCCGCAGCGCC TTCC GGCATTGCGCCCC GTGGGAGTCACGCAG Smed_3400 3609150 - 3608140 - | ABC transporter related Smed_3401 3610231 - 3609167 - | oxidoreductase domain-containing protein Smed_3402 3611067 - 3610228 - | binding-protein-dependent transport systems inner membrane component TERM 3030 3611041 - 3611068 + g 78 -7 -4.67353 | AACGGCGCCGATACG GATGTAGGAGGC GCGT GCTTTCGACATC TTTTTCCCTCCCTAG Smed_3403 3612027 - 3611080 - | binding-protein-dependent transport systems inner membrane component TERM 3031 3611597 - 3611585 - G 78 -10.5 -4.01939 | GAATCCAGAAGGAAA GGGGC GAC GCCCC AGATAGGCGACAGGA Smed_3404 3612239 - 3612045 - | hypothetical protein Smed_3405 3613524 - 3612265 - | extracellular solute-binding protein murQ 3614478 - 3613582 - | N-acetylmuramic acid-6-phosphate etherase TERM 3032 3615251 - 3615297 + G 79 -9.4 -4.16943 | gap 3 TGATATCGTCGATTT CGCGCGGCTTGCGAAGCCGGGCG AGTT CGGCCG-CTATGC--GCCGCGCG TTTTCGAGTATGCGG Smed_3407 3614676 - 3615560 + | ATPase BadF/BadG/BcrA/BcrD type TERM 3033 3615906 - 3615920 + G 74 -4.9 -4.58395 | ACACACGCGCGGAAT GGCTG GAGCG CGGCC TTTTTCAACCCTCGC Smed_3408 3615557 - 3616321 + | GntR family transcriptional regulator TERM 3034 3616808 - 3616794 - g 73 -11.4 -3.54424 | TCGCAGGGCCCGAAA TCGCCG TTG CGGCGA CCAAGTCCTATGTCA Smed_3409 3616361 - 3617386 + | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 3035 3618281 - 3618269 - g 86 -7.7 -4.77157 | TCAACGGACGAAAAA TCCTG CGG CAGGA CGGCCGCCTGACTCT Smed_3410 3617383 - 3618543 + | N-acetylglucosamine-6-phosphate deacetylase Smed_3411 3619383 - 3618646 - | CutC family protein Smed_3412 3620291 - 3619380 - | ROK family protein TERM 3036 3620018 - 3620049 + g 70 -12.2 -3.14344 | CAGGCAGATGCAGGG CCGTCTCGAGCTCG GCGA CGAGCTCGCGGCCG TTGATGCAGGGGATA Smed_3413 3621649 - 3620288 - | hypothetical protein TERM 3037 3622098 - 3622114 + G 73 -6.5 -4.36931 | overlap 3622099 3622104 GCTCGTCGCACTCTG GTTCGCG CTG CGCGAAG TTTTCGTCTGGCTTG Smed_3414 3621988 - 3622740 + | CysZ-like protein Smed_3415 3622949 - 3623158 + | hypothetical protein TERM 3038 3623213 - 3623176 - T 81 -12.8 -3.48276 | opp_overlap 3623182, overlap 3623182 CGTTCCGCTATAGAA GGAAAAGCCTCCGGTC ATCACG AACCGGAGGCTTTCTC GAACATCCTGTATGA TERM 3039 3623207 - 3623182 - T 100 -12.6 -4.53034 | opp_overlap 3623182, overlap 3623176 GCTATAGAAGGAAAA GCCTCCGGTC ATCACG AACCGGAGGC TTTCTCGAACATCCT TERM 3040 3623182 - 3623207 + T 83 -11.9 -3.87075 | opp_overlap 3623182 3623176 GCTATAGAAGGAAAA GCCTCCGGT CATCACGA ACCGGAGGC TTTCTCGAACATCCT Smed_3416 3624224 - 3623232 - | basic membrane lipoprotein TERM 3041 3624375 - 3624356 - R 90 -2.8 -5.75342 | overlap 3624360 CTTCGGCAAAAAAAA CACTCGAA ATTT TTCGGATG GTAAAAAGCTAACCG TERM 3042 3624466 - 3624433 - R 74 -11.2 -3.53012 | gap 2, overlap 3624436 GTCTTCCGGCTGAAA TCAGGAGCGGAAGTGC CCCC GCACTTCCGCT-C-GA CAGGAGGGGTCAGGC TERM 3043 3624465 - 3624436 - R 88 -16.5 -2.90496 | overlap 3624433 TTCCGGCTGAAATCA GGAGCGGAAGTGC CCCC GCACTTCCGCTCG ACAGGAGGGGTCAGG Smed_3417 3625129 - 3624476 - | methionine sulfoxide reductase A TERM 3044 3625204 - 3625214 + r 78 -8.2 -4.53163 | opp_overlap 3625201 3625200, overlap 3625201 3625200 CAGGCGGCAAAGCGC CCCG CGG CGGG TTTTCTCCTGTATCC Smed_3418 3625505 - 3625188 - | putative signal peptide protein TERM 3045 3625275 - 3625265 - G 84 -2.4 -5.30616 | CGACGCAAAGAAAAA CGGC GAA GGCG GGTTGCGCCAGAATC TERM 3046 3627213 - 3627192 - H 71 -10.1 -3.60792 | gap 1, opp_overlap 3627192 3627204 CCCCGAACGTCGAAA GCCCG-GGCG CTC CGCCTCAGGC GTTTGGCGATCGGCG TERM 3047 3628230 - 3628219 - g 74 -5.8 -4.4078 | CGTCCGCAAGGAAAA CTCG AGAT CGAG CGGCTGGTACGGACC Smed_3422 3627958 - 3628872 + | LysR family transcriptional regulator Smed_3423 3629266 - 3628907 - | transport-associated TERM 3048 3629492 - 3629512 + G 73 -3.1 -4.7373 | overlap 3629470 3629491 3629495 3629496 GCGACTTCGTCTTCC GGGTCGCGG TGC CCGTGCTTC TTTTTCGTACCATCG TERM 3049 3629977 - 3630015 + G 70 -12.5 -2.88544 | gap 1, overlap 3629979 GTGAAGACCGTCGTC GACCAGC-TTGCAGGCGT TGCG GCGCCTGCAGCGCTCGTC TCTATCGGCATGGCC Smed_3424 3629371 - 3630315 + | auxin efflux carrier Smed_3425 3631443 - 3630346 - | branched-chain amino acid aminotransferase TERM 3050 3630750 - 3630736 - G 74 -9.2 -3.86015 | GAGTTCTTCGACAAA GCGGCG TTC CACCGC GTCCAGGAACACCAC TERM 3051 3631578 - 3631559 - R 73 -3.4 -4.7629 | overlap 3631542 3631561 GCAGCAATTCAAAAA CGCTCCAG CGGC CTTGTGCG TCCGACGCCCGGCGC TERM 3052 3631700 - 3631683 - R 100 -9.1 -4.87626 | opp_overlap 3631683 GCGGAATATGAAAAA CCCGATC GTTC GACCGGG TTTTCGGGAGGATCG Smed_3426 3632533 - 3631742 - | cytochrome c class I TERM 3053 3631842 - 3631873 + g 74 -13.6 -2.89564 | GCAGCAGGTGCTGGC GCTGCGCCGCCTTC GGCC GGAGGCGGAGCCGC TGTGTCAGCTGGAGC TERM 3054 3632079 - 3632096 + g 83 -7.7 -4.59853 | gap 1, opp_overlap 3632072, overlap 3632075 3632081 CCGGCAAAGCCCATG GC-CGTGC CCG GCACGTGC TTTTTCGGCGCTTCG Smed_3427 3632689 - 3633441 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 3055 3633614 - 3633604 - g 73 -8.2 -4.07568 | overlap 3633605 CCTGGCGGTGGAAAA CGGC GAG GCCG ATCTCGCGATGATCC Smed_3428 3633467 - 3634321 + | prephenate dehydratase Smed_3429 3634672 - 3634809 + | hypothetical protein TERM 3056 3634856 - 3634889 + T 75 -10.2 -3.68529 | CGCAGCATCCAGAGT CTTCCACACCCCGC CTCCGT GCGGGGTGTGAGCG TTTCAGTGATGCCGT Smed_3430 3635932 - 3634952 - | NUDIX hydrolase Smed_3431 3636339 - 3635935 - | histidine triad (HIT) protein TERM 3057 3636112 - 3636124 + g 76 -6.2 -4.58395 | overlap 3636110 GATATTGATTTTCGC GGCG CCGGT CGCC TTTTTCAGGCCTGCC Smed_3432 3636635 - 3638512 + | DNA polymerase III subunits gamma and tau Smed_3433 3638629 - 3638952 + | hypothetical protein Smed_3434 3639042 - 3639653 + | lysine exporter protein LysE/YggA recR 3639751 - 3640356 + | recombination protein RecR Smed_3436 3640392 - 3641630 + | lytic murein transglycosylase Smed_3437 3643491 - 3641836 - | protein of unknown function DUF894 DitE TERM 3058 3642442 - 3642420 - G 71 -9 -3.74077 | opp_overlap 3642439 TCTGATAGAGCGAAA GCGCCCGGCC GAC GACCCAGCGC GGTGTCGAAAGCTGC TERM 3059 3643643 - 3643666 + H 100 -8 -5.4505 | opp_overlap 3643643 GATCGGTTAGATGAA GGGTGGGGCC GTGA GGACCCGCTC TTTTTTATTAGCCGG TERM 3060 3644299 - 3644289 - g 71 -5.4 -4.4078 | CGCCGCCAACGAAAA CTTC GAA GAAG AAGATAGAGATATCG Smed_3438 3643702 - 3644319 + | hypothetical protein TERM 3061 3644667 - 3644645 - g 75 -12 -3.65827 | opp_overlap 3644633 CAATCCCGATGCAAA GCTCGGCGAT TTC ATCGCCGATC CGCTCCCGCCCATGG TERM 3062 3645132 - 3645160 + G 75 -14.5 -2.80935 | CCGGTCGGCGCCTGC GTCGGCATGCGCG GCT CGCGCGTGCAGGC TGTCGTCGGTGAACT nusA 3644337 - 3645995 + | transcription elongation factor NusA TERM 3063 3646279 - 3646249 - g 95 -15.4 -4.08216 | GCAGCTCGTGGAAAA GGCGGTGGCGAAGA AGC TCTTCGCCCGCGCC CTTCGCGCCGAAGTA TERM 3064 3646413 - 3646442 + G 80 -5.6 -4.7373 | gap 1, overlap 3646414 CAACCAAGACGGAGC AGGCGGTGCGCGG ACTAG CCGCGC-TTGCCG TTTTTCATGCGATCG Smed_3440 3646001 - 3646723 + | hypothetical protein TERM 3065 3647323 - 3647305 - g 72 -11.6 -3.29325 | overlap 3647303 3647306 TCGCGAGAAGGAAGA GGCCGCGC GCC GCGCCGCC GAAGAGGCTGCGCGT TERM 3066 3647531 - 3647497 - g 70 -12.1 -3.25073 | gap 1, overlap 3647495 3647498 3647517 TGGCGAAGACGAAGA GGGAGAGCGCCGCCAC AGCA GTGCCGGAGCTC-CCC GCGGCAAGGTCGTGC TERM 3067 3647531 - 3647498 - g 74 -14.5 -2.54723 | overlap 3647497 3647495 3647517 GGCGAAGACGAAGAG GGAGAGCGCCGCCAC AGCA GTGCCGGAGCTCCCC GCGGCAAGGTCGTGC infB 3646829 - 3649486 + | translation initiation factor IF-2 TERM 3068 3649506 - 3649534 + F 100 -21.8 -5.40072 | opp_overlap 3649488 TCCGGCAGGATGTTG GCGAGCGCCGGA CCGGC TCCGGCGCTCGC TTTTTTTAGAGCGGG rbfA 3649659 - 3650063 + | ribosome-binding factor A truB 3650075 - 3651007 + | tRNA pseudouridine synthase B TERM 3069 3651188 - 3651216 + G 79 -8.8 -4.3739 | gap 1, opp_overlap 3651174, overlap 3651189 AGCCGGGAAGATGCT TCGTCCGGCAGCC TGCA GGCTGCCGC-CGG TTTTGTCCGCGACTA Smed_3444 3651152 - 3652870 + | signal transduction histidine kinase rpsO 3653110 - 3653379 + | 30S ribosomal protein S15 TERM 3070 3653389 - 3653418 + F 100 -15.7 -5.71712 | overlap 3653360 3653390 CGCTAATCGACTGGT CCCGGCGGGTTGT CTCG GCAACCCGCCGGC TTTTTTTCTGTGGCC TERM 3071 3653390 - 3653417 + F 100 -19.2 -4.01943 | overlap 3653360 3653389 GCTAATCGACTGGTC CCGGCGGGTTGT CTCG GCAACCCGCCGG CTTTTTTTCTGTGGC Smed_3446 3653754 - 3655898 + | polynucleotide phosphorylase/polyadenylase TERM 3072 3655893 - 3655877 - f 84 -15.1 -2.98545 | overlap 3655858 3655874 TGCCGAGAAGAAGGA CGGCGGC GAA GCCGCCG AATAAACCGGCCTCG TERM 3073 3655951 - 3655919 - f 74 -13.3 -2.60496 | opp_overlap 3655922, overlap 3655918 3655916 CCTCGGCTGAAACAT TCAGGGCGCGGAGCG GAT CGCTTCGCGCCCTTT CTTGTGACGATTGGA TERM 3074 3655922 - 3655948 + F 100 -21.6 -4.31835 | opp_overlap 3655919 3655918 3655916 CGGCTGAAACATTCA GGGCGCGGAGCG GAT CGCTTCGCGCCC TTTCTTGTGACGATT Smed_3447 3656090 - 3657106 + | methyltransferase small TERM 3075 3657121 - 3657109 - T 70 -4.7 -4.4267 | GGCGAAAAGGTAAAA GGGCG AAC CGCTC CCGCAAACCGGGGCG Smed_3448 3658068 - 3657262 - | enoyl-(acyl carrier protein) reductase Smed_3449 3659293 - 3658073 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 3076 3659215 - 3659192 - G 76 -6.6 -4.41844 | opp_overlap 3659206 3659208 AAAATCCGGAGAAAA CGTGATGCCC GAAC GCGCATCGCG GAGCGACGCGGTGAC Smed_3450 3659857 - 3659342 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 3077 3660383 - 3660428 + G 76 -9 -4.07568 | gap 2 GAGAGACTGCGCAAT TCGGGTTTGC--GCCCGACGCG CCAG CGCGTCGCGCTTGCCGACCTGA TTTTCGCCAAGGGCG Smed_3451 3660338 - 3660760 + | ferric uptake regulator family protein Smed_3452 3661431 - 3660796 - | hypothetical protein Smed_3453 3662311 - 3661523 - | hypothetical protein TERM 3078 3661892 - 3661878 - G 77 -2.1 -5.01732 | gap 1 AAGGTCCCGAAAAAA GC-TGC AGAG GCATGC GCGTCGCCCTCGTAG Smed_3454 3662448 - 3662591 + | hypothetical protein TERM 3079 3662967 - 3662948 - T 88 -16.4 -3.05384 | opp_overlap 3662929 CCGGGGGGCAGGCAA GCGGGCGG CGAT CCGCCCGC ATTGCCAGACTGATC Smed_3455 3663370 - 3662981 - | hypothetical protein Smed_3456 3663656 - 3665026 + | 3-phosphoshikimate 1-carboxyvinyltransferase cmk 3665023 - 3665661 + | cytidylate kinase rpsA 3665828 - 3667534 + | 30S ribosomal protein S1 TERM 3080 3667591 - 3667553 - T 81 -12.5 -3.59979 | gap 1, opp_overlap 3667559, overlap 3667556 TTGCCGGACCTGAAA TG-ATGAGCCCGCGGAGA GCGA TCTCCGCGGGCTTTTTCA TGGCGCAGCCTGGGG TERM 3081 3667587 - 3667556 - T 82 -14.4 -2.92613 | opp_overlap 3667559, overlap 3667553 CCGGACCTGAAATGA TGAGCCCGCGGAGA GCGA TCTCCGCGGGCTTT TTCATGGCGCAGCCT TERM 3082 3667559 - 3667584 + T 100 -20.5 -4.72272 | opp_overlap 3667556 3667553 GACCTGAAATGATGA GCCCGCGGAGA GCGA TCTCCGCGGGC TTTTTCATGGCGCAG Smed_3459 3669221 - 3667656 - | hypothetical protein TERM 3083 3668117 - 3668132 + g 81 -3.9 -5.07107 | overlap 3668089 CGTTCTCCGGAAGCA GGGGC GCGGCA GCTCC TTTTTTCCCCGTTTC Smed_3460 3669365 - 3669697 + | hypothetical protein Smed_3461 3670290 - 3669757 - | hypothetical protein TERM 3084 3670305 - 3670325 + r 74 -6.2 -4.43844 | gap 1, overlap 3670305 TCTTCTCCTCACTTT CC-GAAAGC CGTT GCTTTCCGG TTTTGTCCCTGCTCC TERM 3085 3670758 - 3670727 - R 100 -21.8 -3.28712 | opp_overlap 3670727 3670730 3670735, overlap 3670730 3670735 TTGCGGTTCGGATAA CAAGAAAAGCCCGG ATTT CCGGGCTTTTCTTG TTTTCAGGCGCCGAA TERM 3086 3670727 - 3670758 + r 100 -21.8 -4.07568 | opp_overlap 3670727 3670730 3670735, overlap 3670730 3670735 TTGCGGTTCGGATAA CAAGAAAAGCCCGG ATTT CCGGGCTTTTCTTG TTTTCAGGCGCCGAA TERM 3087 3670730 - 3670755 + r 100 -17.7 -4.17048 | opp_overlap 3670727 3670730 3670735, overlap 3670727 3670735 CGGTTCGGATAACAA GAAAAGCCCGG ATTT CCGGGCTTTTC TTGTTTTCAGGCGCC TERM 3088 3670755 - 3670730 - R 100 -17.7 -3.78934 | opp_overlap 3670730 3670727 3670735, overlap 3670727 3670735 CGGTTCGGATAACAA GAAAAGCCCGG ATTT CCGGGCTTTTC TTGTTTTCAGGCGCC TERM 3089 3670750 - 3670735 - R 100 -11.8 -4.95547 | opp_overlap 3670730 3670727 3670735, overlap 3670730 3670727 CGGATAACAAGAAAA GCCCGG ATTT CCGGGC TTTTCTTGTTTTCAG TERM 3090 3670735 - 3670750 + r 100 -11.8 -5.093 | opp_overlap 3670735 3670730 3670727, overlap 3670730 3670727 CGGATAACAAGAAAA GCCCGG ATTT CCGGGC TTTTCTTGTTTTCAG Smed_3462 3672777 - 3670822 - | putative adenylate/guanylate cyclase TERM 3091 3672369 - 3672326 - G 100 -22.4 -3.05384 | TCCCGTTCCATCGAA CGCACAGCGATGGCCGCGCC CCGC GGCGCGTCCAGCGCCATGCG CCAGGCGGCCGAGTC Smed_3463 3673288 - 3672959 - | hypothetical protein Smed_3464 3673498 - 3674124 + | 3'-5' exonuclease Smed_3465 3674445 - 3674164 - | putative selenoprotein Smed_3466 3674651 - 3675103 + | DoxX family protein Smed_3467 3675599 - 3675192 - | nucleoside diphosphate kinase regulator Smed_3468 3675974 - 3676465 + | glutathione-dependent formaldehyde-activating GFA Smed_3469 3678617 - 3676782 - | GTP-binding protein LepA Smed_3470 3679932 - 3678667 - | major facilitator transporter Smed_3471 3680109 - 3680702 + | XRE family transcriptional regulator Smed_3472 3680704 - 3681225 + | GCN5-related N-acetyltransferase Smed_3473 3681940 - 3681302 - | exopolysaccharide synthesis ExoD TERM 3092 3681408 - 3681396 - G 71 -5.5 -4.29227 | overlap 3681398 3681399 GCAACCAGGAACAAA TAGCC GCC GGCCA CCATCAGCCCGTCGC Smed_3474 3682102 - 3681953 - | hypothetical protein TERM 3093 3682324 - 3682347 + G 71 -13.8 -2.64099 | overlap 3682323 GGCGCTCTGATCGGC GCCGGTCTCG GCGC CGCGACCGGC CTTCTCGTGGGCGGC Smed_3475 3682204 - 3682869 + | OmpA/MotB domain-containing protein TERM 3094 3682891 - 3682919 + T 100 -20.3 -3.53012 | opp_overlap 3682891 TCCGATCGTTCACAA GAGGCCGCGCGGA TTT TCCGGGCGGCCTC TTTCCGAGCGGCAAC TERM 3095 3682919 - 3682891 - T 100 -20.3 -3.30124 | opp_overlap 3682891 TCCGATCGTTCACAA GAGGCCGCGCGGA TTT TCCGGGCGGCCTC TTTCCGAGCGGCAAC Smed_3476 3684239 - 3683187 - | lysine 2,3-aminomutase YodO family protein Smed_3477 3685288 - 3684236 - | lysine--tRNA ligase Smed_3478 3685448 - 3686017 + | elongation factor P TERM 3096 3686036 - 3686076 + F 100 -19.8 -4.18401 | opp_overlap 3686041, overlap 3686037 3686041 GGTCCTGGTCGAGGT CGAAACGGGGACGGTGGC CGAGA GCTGCCGTCCCCGTTTCC TTTTCCCGTGTCTGG TERM 3097 3686037 - 3686075 + F 100 -23.3 -3.10558 | opp_overlap 3686041, overlap 3686036 3686041 GTCCTGGTCGAGGTC GAAACGGGGACGGTGGC CGAGA GCTGCCGTCCCCGTTTC CTTTTCCCGTGTCTG TERM 3098 3686041 - 3686071 + F 100 -18.3 -4.20806 | opp_overlap 3686041, overlap 3686037 3686036 TGGTCGAGGTCGAAA CGGGGACGGTGGC CGAGA GCTGCCGTCCCCG TTTCCTTTTCCCGTG TERM 3099 3686071 - 3686041 - f 88 -14.6 -3.57144 | opp_overlap 3686041 3686037 3686036 TGGTCGAGGTCGAAA CGGGGACGGTGGCC GAG AGCTGCCGTCCCCG TTTCCTTTTCCCGTG Smed_3479 3686169 - 3687410 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 3100 3687461 - 3687487 + F 72 -6 -4.28111 | overlap 3687462 3687479 TGTTGACGAGGTCCT TATTCTTTAGAA TTG TTCTAAAGAAGG TTTCTTGATGCTCTC Smed_3480 3687495 - 3688478 + | rubrerythrin TERM 3101 3688792 - 3688808 + T 71 -10.8 -3.53224 | opp_overlap 3688792 ACACGCAACAAAAAA GGCCGC ATCTC GCGGCC TTTGAGGAGGAAATC TERM 3102 3688808 - 3688792 - T 100 -11.5 -5.49234 | opp_overlap 3688792 ACACGCAACAAAAAA GGCCGCA TCT CGCGGCC TTTGAGGAGGAAATC Smed_3481 3689454 - 3688834 - | transglutaminase family protein cysteine peptidase BTLCP Smed_3482 3690557 - 3689739 - | hypothetical protein TERM 3103 3690849 - 3690835 - H 71 -7 -4.14764 | overlap 3690836 GCGCAAACAAGGAAA TCCGGG TCC CCCGGG TTCAGCTTATCGATG infC 3690912 - 3691310 + | translation initiation factor IF-3 TERM 3104 3691344 - 3691382 + F 100 -18.9 -5.02476 | opp_overlap 3691348, overlap 3691348 CAGGATGCGCTTAGG GAAAGCCGCCCCGGGGG AGGAG TCCGTGGGGCGGCTTTC TTTTTTGGGAGGTCT TERM 3105 3691378 - 3691348 - f 78 -11 -3.64822 | opp_overlap 3691348 3691344 ATGCGCTTAGGGAAA GCCGCCCCGGGG GAGGAGT CCGTGGGGCGGC TTTCTTTTTTGGGAG TERM 3106 3691348 - 3691378 + F 100 -13.9 -5.04249 | opp_overlap 3691348, overlap 3691344 ATGCGCTTAGGGAAA GCCGCCCCGGGGG AGGAG TCCGTGGGGCGGC TTTCTTTTTTGGGAG rpmI 3691607 - 3691810 + | 50S ribosomal protein L35 rplT 3691847 - 3692251 + | 50S ribosomal protein L20 TERM 3107 3692293 - 3692317 + F 100 -12.8 -5.64873 | opp_overlap 3692293 GAAATTGTTGGGAAA CCCGCGCTGG CAGGA CTGGCGCGGG TTTTTTCTTGTTCGG pheS 3692417 - 3693499 + | phenylalanyl-tRNA synthetase subunit alpha pheT 3693533 - 3695959 + | phenylalanyl-tRNA synthetase subunit beta Smed_3488 3696574 - 3696215 - | hypothetical protein TERM 3108 3696384 - 3696400 + g 85 -10.1 -4.36914 | AGCGGTTGCGCATCC GGAGGCG CCG CGCCTTC TTTTGTGACCGCGGC TERM 3109 3696700 - 3696665 - R 83 -12 -3.88787 | gap 1, overlap 3696669 GGACATCGCGATAAA CT-TAGGGCATCGCAAC GGA ATTGCGATGCCCTCCAG CTCCCTGAGCTCCGC TERM 3110 3696695 - 3696669 - R 87 -17.4 -2.70532 | overlap 3696665 ATCGCGATAAACTTA GGGCATCGCAAC GGA ATTGCGATGCCC TCCAGCTCCCTGAGC Smed_3489 3697721 - 3696726 - | aldo/keto reductase TERM 3111 3697239 - 3697272 + g 74 -13.1 -3.33509 | gap 1, overlap 3697236 GCGGCGGATGGTGGC GGCGCTCGCC-TCGGA AAG TCCGAGGGCGCGCACC TTGCCTTCTTTCACC TERM 3112 3697636 - 3697654 + g 75 -14.6 -2.73364 | GATTGGTTTTCGTCT GCTTCGCC ATA GGCGAAGC TCATTCCCATGCAAC TERM 3113 3698733 - 3698759 + G 72 -12.2 -3.27617 | opp_overlap 3698728, overlap 3698735 3698737 3698737 TACTATCCAACGCGC CGTCTGATGCGC CCG GCGCTTCGGGCG TTCATCGATTTCTTC Smed_3490 3697899 - 3698789 + | LysR family transcriptional regulator TERM 3114 3698828 - 3698798 - T 100 -20.5 -3.76224 | gap 1, opp_overlap 3698798 3698804 3698823 3698825, overlap 3698782 CGGCTAGTCAGGAAA GCGG-CAGCCGGCG CTTT CGCCGGCTGCCCGC GAATATCACGCGGCC TERM 3115 3698823 - 3698843 + T 86 -5.3 -5.08601 | opp_overlap 3698782 3698798, overlap 3698804 3698825 GCGCTTTCGCCGGCT GCCCGCG AATATCA CGCGGCC TTTTTGTTCGCCTGC Smed_3491 3699325 - 3698834 - | hypothetical protein TERM 3116 3699428 - 3699414 - H 75 -5.6 -4.62069 | opp_overlap 3699414 TCGCGAGTGCAAAAA GCGCGT CTG ACGGGC TACTTTCACCGCTCG Smed_3492 3699548 - 3700318 + | short chain dehydrogenase Smed_3493 3700352 - 3700981 + | hypothetical protein Smed_3494 3701947 - 3700997 - | aldo/keto reductase TERM 3117 3702019 - 3702046 + H 70 -2.6 -4.85599 | gap 1, opp_overlap 3702011 3702030, overlap 3702020 3702020 3702041 AAACATAGGCCAGCT TC-CGGTCGAAAG ACA CCTTCGTCCGCGG TTTTTCTGGGCTAAC Smed_3495 3702162 - 3703148 + | oxidoreductase domain-containing protein TERM 3118 3703188 - 3703161 - T 85 -14.9 -3.09327 | gap 1, opp_overlap 3703161, overlap 3703164 TGAGCCCACGCAAGA TGAGCCCGGCGC ACATG GCGCCGGGC-CA TTCTTTCATGCAGCC TERM 3119 3703161 - 3703188 + T 100 -14.9 -4.00042 | gap 1, opp_overlap 3703161 3703164 TGAGCCCACGCAAGA TGAGCCCGGCGC ACATG GCGCCGGGC-CA TTCTTTCATGCAGCC TERM 3120 3703186 - 3703164 - T 89 -17.7 -2.75992 | opp_overlap 3703161, overlap 3703161 GCCCACGCAAGATGA GCCCGGCGC ACATG GCGCCGGGC CATTCTTTCATGCAG Smed_3496 3703655 - 3703194 - | hypothetical protein TERM 3121 3703265 - 3703251 - G 73 -11.4 -3.60925 | CTTGAAAAACAGGAA GTCGGC GAC GCCGAC CATGGCCATGGCGAT Smed_3497 3703732 - 3704523 + | XRE family transcriptional regulator TERM 3122 3704589 - 3704575 - f 80 -4.9 -4.88736 | opp_overlap 3704580 3704584, overlap 3704587 TACGATGTAGAAAAA CGCCG GATAG CAGCG CCTTGCTGCTGATCT TERM 3123 3706192 - 3706166 - g 78 -3.6 -5.0133 | gap 1, overlap 3706169 3706170 CAGGCGCCGAAAAAA CGACCGGCACG AGCGGG CGAGCCGA-CG AAGCAGGGCAGCCTC xseA 3704633 - 3706213 + | exodeoxyribonuclease VII large subunit Smed_3499 3706213 - 3706803 + | NAD(P)H dehydrogenase (quinone) Smed_3500 3707307 - 3706813 - | MarR family transcriptional regulator Smed_3501 3707421 - 3708296 + | hypothetical protein Smed_3502 3708455 - 3709117 + | ECF subfamily RNA polymerase sigma-24 factor Smed_3503 3709107 - 3709505 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3124 3709614 - 3709564 - T 78 -8.89999 -4.14472 | gap 1, overlap 3709565 TGAATAGTCTTAAAA GGTGAGGGCGGCACTTCTCCCCGT CGGA ACGGGGAGAAGTGCCGGCAGG-CG GATGAGGGGCGGCTT TERM 3125 3709613 - 3709565 - T 73 -12.4 -3.08201 | gap 1, overlap 3709564 GAATAGTCTTAAAAG GTGAGGGCGGCACTTCTCCCCGT CGGA ACGGGGAGAAGTGCCGGCAGG-C GGATGAGGGGCGGCT Smed_3504 3710894 - 3709638 - | peptidase M29 aminopeptidase II TERM 3126 3709934 - 3709914 - G 74 -14.7 -2.58579 | overlap 3709913 GGAATGCGGCACAAG CGCCACCTC GCC GAGGCGGCG GGCGCCCTCGTCCGT Smed_3505 3711655 - 3710966 - | glutathione S-transferase domain-containing protein TERM 3127 3711554 - 3711574 + g 74 -5.3 -4.56597 | GGCGAGATCGATATC GACGCGTTC GAA GGGCACGTC TTTTTCGCGGAGCGC TERM 3128 3711802 - 3711821 + G 70 -10.6 -3.55444 | ATGGATCGGTCTGAT GCGGGCGC AGCA GCGCACGC TTTCAGCCATCGAAA TERM 3129 3712164 - 3712145 - g 78 -12.2 -3.68341 | opp_overlap 3712143 AAGCTTAGCGAAGAA GAGGCAAG CGCG CTTGCCTC GCTGCTCTCAAAGCT Smed_3506 3711677 - 3712186 + | MarR family transcriptional regulator Smed_3507 3712679 - 3712206 - | ybaK/ebsC protein TERM 3130 3712390 - 3712415 + g 76 -11.1 -3.80573 | gap 1 CCGCCGACGTGATAG CCGGTCAGCCGC TCG GCGTCTG-CCGG TTTCATCATGCTCGC Smed_3508 3713033 - 3712683 - | arsenate reductase and related Smed_3509 3714286 - 3713117 - | aromatic amino acid aminotransferase TERM 3131 3714084 - 3714069 - G 78 -4.6 -4.71828 | overlap 3714070 AGGCGATCAAGAAAA TCGAGG TCTC CCTCGG GTCCGACATAGGCCT TERM 3132 3714391 - 3714439 + r 77 -7.9 -4.26903 | overlap 3714411 AGAGCGGTTCAGGCC TCGAGCGTGCCCGGCTTTCGCGC CGT GCGCGAGGGTTCGGCGCAGGCGA TTTTCATCAGGTCGG Smed_3510 3715445 - 3714384 - | succinylglutamate desuccinylase/aspartoacylase TERM 3133 3714634 - 3714614 - G 70 -12.5 -2.84325 | opp_overlap 3714625, overlap 3714609 CGCGGTGAAAGAGGA TCGCACCGG CCT CCGGTGCGC GGATCATCTCGATAT Smed_3511 3716432 - 3716016 - | glutathione-dependent formaldehyde-activating GFA Smed_3512 3716944 - 3716480 - | activator of Hsp90 ATPase 1 family protein Smed_3513 3717270 - 3716941 - | regulatory protein ArsR TERM 3134 3717313 - 3717278 - H 86 -5.6 -5.14563 | opp_overlap 3717299 TCGGTCATGAAAAAA TAATAGCGCCAACTAA TTAA TTAGTCAACACTATCA TTTTTAGATCGTCGG Smed_3514 3717420 - 3718565 + | FMN-dependent alpha-hydroxy acid dehydrogenase guaA 3720978 - 3719416 - | bifunctional GMP synthase/glutamine amidotransferase protein Smed_3518 3721723 - 3721085 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Smed_3519 3722229 - 3721720 - | thioesterase superfamily protein TERM 3135 3722004 - 3721957 - G 71 -12.7 -3.10796 | gap 1, overlap 3721996 GTCTATTACCGAATA GCCTGCATAGGTTCCGGCCGCA TCGAG CGCGGCCGAAATC-ACGCCGGC ATGCAGGAGCCCGTG Smed_3520 3722784 - 3722251 - | TspO and MBR like protein TERM 3136 3722556 - 3722511 - G 81 -13.4 -3.54424 | overlap 3722516 3722538 3722540 3722543 GGCGATCGCCTGAAA GACCAGCCGCGCGGC-GATC GCCCAGAA GACCAGCCGCGCGGC-GATC GCCTGAAAGACCAGC TERM 3137 3722552 - 3722516 - G 79 -15.2 -2.84325 | gap 1, overlap 3722511 3722538 3722540 3722543 TCGCCTGAAAGACCA GCCGCGCGGC-GATC GCCCAGAA GACCAGCCGCGCGGC GATCGCCTGAAAGAC TERM 3138 3722579 - 3722543 - G 78 -15.2 -2.80074 | gap 1, overlap 3722516 3722511 3722540 3722538 3722565 3722570 TCGCCCAGAAGACCA GCCGCGCGGC-GATC GCCTGAAA GACCAGCCGCGCGGC GACGACCCAGAAAAC Smed_3521 3722866 - 3723414 + | GCN5-related N-acetyltransferase Smed_3522 3724499 - 3723366 - | hypothetical protein TERM 3139 3724624 - 3724612 - H 95 -6.2 -5.63517 | opp_overlap 3724612 3724611 3724613, overlap 3724596 3724613 GCCTGAAACAAAAAA GGCG ACTGG CGCC GGTCCCCCTTGTTGA TERM 3140 3726477 - 3726529 + G 91 -19.3 -3.08679 | gap 3, opp_overlap 3726467, overlap 3726511 AATCAGCCTCTGGCC GACGTCCTGGGCGGTGCGCTGTC-CC TGCA GGCGACGGCGCAC-GCCCAGG-CGGC TCTTGGCTCGGGCGC TERM 3141 3726534 - 3726565 + G 72 -12.2 -3.33696 | overlap 3726511 3726536 GCCCAGGCGGCTCTT GGCTCGGGCGCCCT GTTC AGTGCGCCCGAGTG TTCCTTCGGCGGCCG TERM 3142 3726536 - 3726563 + G 89 -17 -3.23853 | overlap 3726511 3726534 CCAGGCGGCTCTTGG CTCGGGCGCCCT GTTC AGTGCGCCCGAG TGTTCCTTCGGCGGC Smed_3523 3725274 - 3726920 + | polypeptide-transport-associated domain-containing protein TERM 3143 3727087 - 3727111 + G 76 -9.2 -4.07568 | TGCATTTCCGGCGCG GGCGGCTTGC CTGGA GCAGGCGGCC TTTTCGGAGCGGGCA TERM 3144 3728160 - 3728205 + G 71 -12.5 -3.06696 | gap 1, opp_overlap 3728120 3728153, overlap 3728162 CGAGATCACTGCGTC CGGCGCGTCCGGCGGCGGCG TGGATGT CGC-GTCGCGGGGCGTGCTG TCTCTTGCGGGGCGC Smed_3524 3727030 - 3728475 + | filamentous haemagglutinin outer membrane protein TERM 3145 3732352 - 3732387 + G 71 -9.6 -3.75153 | gap 1 ATCGTGACGTCGGGC GC-GCTGCAGGGTAGCG ACA CGCTCTCCGGCGGCAGC TTTGCGTTCGCCGAC Smed_3525 3728785 - 3733803 + | alpha beta-propellor repeat-containing integrin Smed_3526 3733954 - 3734562 + | invasion associated locus B family protein Smed_3527 3735759 - 3734626 - | putative signal peptide protein TERM 3146 3735109 - 3735145 + g 76 -8.5 -4.19238 | overlap 3735110 GAGCGGATTGCTGGT TCCGGGCTTCTTCCAGG CGG CCTGGATGCCGTCCGGC TTTTCCCATTCCGCA TERM 3147 3735110 - 3735144 + g 70 -12 -3.11222 | overlap 3735109 AGCGGATTGCTGGTT CCGGGCTTCTTCCAGG CGG CCTGGATGCCGTCCGG CTTTTCCCATTCCGC Smed_3528 3737312 - 3735759 - | hypothetical protein TERM 3148 3736831 - 3736793 - G 71 -13.9 -2.52464 | gap 1, opp_overlap 3736782 3736791, overlap 3736775 CCTTGTGCGAAGCGA TCGCCTCGCGCTCTGC TTCGCCGC GCGGAGCGCG-GGCGA GACGGAACAGCATCG TERM 3149 3737321 - 3737349 + r 90 -12.4 -4.24123 | gap 1, opp_overlap 3737319 TCCTCATCGAAGAGG GCCGGGCCGCCTG TCCG CAG-CGGCCCGCC TTTTCAGCTTATTGG Smed_3529 3738638 - 3737358 - | putative iron-regulated protein Smed_3530 3740072 - 3738783 - | Fmu (Sun) domain-containing protein Smed_3531 3740579 - 3740205 - | rare lipoprotein A Smed_3532 3740937 - 3740764 - | hypothetical protein Smed_3533 3741916 - 3741041 - | NAD-dependent epimerase/dehydratase Smed_3534 3743076 - 3741913 - | hypothetical protein TERM 3150 3742564 - 3742540 - G 71 -8.5 -3.86194 | overlap 3742527 AAGGCTGCCGAGAAA CAGCCAGGAGC CGA ACTCGCGGCTG ACCAGGTTGGTGTGC Smed_3535 3743779 - 3743087 - | glutathione S-transferase domain-containing protein TERM 3151 3744481 - 3744493 + G 91 -9.1 -4.5774 | GGGAACCGACAAGCG CTCCG CCG CGGAG TTTTCCTTCTTCCTG TERM 3152 3744607 - 3744626 + G 71 -5.7 -4.31692 | gap 1 CGCCGCCGGTTTCAT TGCC-GCG TTCAT CGCCGGCA TTTTCGTGGTGCGTT Smed_3536 3743936 - 3744742 + | undecaprenyl pyrophosphate phosphatase TERM 3153 3744793 - 3744762 - T 100 -18.8 -4.33258 | ACCCGCAAACATAAA GCCGGATGCGTCTC CTTC GAAACGCACCCGGC TCCTGGCCCCCGCCA Smed_3537 3745015 - 3744854 - | putative signal peptide protein TERM 3154 3745232 - 3745213 - R 100 -10.6 -5.00616 | GGGGGCCGCAAAAAA GCCGCCGG CGAA CCGGAGGC GTAAGTGCGTTCGCA Smed_3538 3746241 - 3745261 - | NADH dehydrogenase (ubiquinone) Smed_3539 3746649 - 3746362 - | hypothetical protein Smed_3540 3747452 - 3746754 - | orotidine 5'-phosphate decarboxylase Smed_3541 3748059 - 3747460 - | phosphoglycerate mutase Smed_3542 3748658 - 3748056 - | hypothetical protein Smed_3543 3749978 - 3748860 - | DNA polymerase III subunit beta Smed_3544 3750240 - 3751202 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 3155 3751511 - 3751553 + G 72 -2 -4.72272 | gap 3, overlap 3751512 TGCGCTACGATATCG TCG-CCGTCA--TGCCCTGGC GATG GCCGCGGCATCTGACGGACGC TTTTTGATCGGCGGG Smed_3545 3751192 - 3751560 + | hypothetical protein Smed_3546 3751749 - 3752696 + | glutathione synthetase TERM 3156 3752710 - 3752687 - f 80 -4.5 -4.87665 | gap 1, opp_overlap 3752695 3752700 CGCGATCGAGAAAAA GCGCGCCTGA TTCGC TC-GGCGGGC CTTCATCCTTCATTG TERM 3157 3754224 - 3754209 - g 77 -2.4 -5.08824 | overlap 3754210 3754211 CGGTGATCGAAAAAA TCGCCG AGCC CGACGC GGCCGGCCTGCAGCT Smed_3547 3752813 - 3754411 + | Mg chelatase, subunit ChlI Smed_3548 3754428 - 3754802 + | SH3 domain-containing protein Smed_3549 3756180 - 3755212 - | cysteine synthase A TERM 3158 3756163 - 3756145 - G 72 -2.3 -4.67982 | gap 1, overlap 3756147 GGTGATCGAAGAAAA GACGCGGC CACG GCCGGG-C TTGCGCGCTTCAGAC TERM 3159 3757366 - 3757390 + G 83 -7.8 -4.62069 | gap 1, overlap 3757371 TATCTTGCCTGGCAG GCGGTGCGGCC GGGC GGTCGC-TCGC TTTTTCAGGTGCGGG Smed_3551 3757096 - 3757728 + | lysine exporter protein LysE/YggA Smed_3552 3758705 - 3757797 - | hypothetical protein TERM 3160 3758562 - 3758547 - G 78 -6.8 -4.60487 | overlap 3758558 GATGAGGCCGAAAAA TGCCGC AAGC ACGGCA AGCGTCGCGGCGCCG Smed_3553 3758839 - 3759276 + | AsnC family transcriptional regulator dut 3759751 - 3759269 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Smed_3555 3759850 - 3761433 + | peptide chain release factor 3 Smed_3556 3762315 - 3761452 - | hypothetical protein Smed_3557 3763237 - 3762428 - | AraC family transcriptional regulator Smed_3558 3763763 - 3763359 - | glutathione-dependent formaldehyde-activating GFA Smed_3559 3764921 - 3764046 - | myo-inositol catabolism IolB domain-containing protein Smed_3560 3765912 - 3765010 - | xylose isomerase domain-containing protein Smed_3561 3767862 - 3765994 - | thiamine pyrophosphate protein central region Smed_3562 3769875 - 3767908 - | ribokinase-like domain-containing protein Smed_3563 3770848 - 3769994 - | RpiR family transcriptional regulator Smed_3564 3772110 - 3770980 - | oxidoreductase domain-containing protein Smed_3565 3772354 - 3773178 + | hypothetical protein Smed_3566 3774420 - 3773197 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 3161 3773528 - 3773510 - G 70 -11.6 -3.19246 | opp_overlap 3773509 3773508 GCAAGCCGAAGTGAA GGCGGGGC CTC GCCCGGCC GCTTCTTGATCTTGT Smed_3567 3774565 - 3775023 + | BadM/Rrf2 family transcriptional regulator TERM 3162 3775748 - 3775761 + G 83 -9.5 -4.36914 | opp_overlap 3775748, overlap 3775727 TGCGCTTTCGAGGAA GGCCC GCTC GGGCC TTTTATACGGACGAA Smed_3568 3775013 - 3775918 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Smed_3569 3776654 - 3775971 - | ankyrin Smed_3570 3777457 - 3776678 - | short-chain dehydrogenase/reductase SDR Smed_3571 3779115 - 3777541 - | 2-polyprenylphenol 6-hydroxylase ubiE 3779896 - 3779120 - | ubiquinone/menaquinone biosynthesis methyltransferase Smed_3573 3780080 - 3781000 + | formamidopyrimidine-DNA glycosylase Smed_3574 3781073 - 3781846 + | enoyl-CoA hydratase