TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.314233 %AT, 5261101 nt, 42113 terms. Intergenic: 0.375276 %AT, H2T: 417097 nt, 3802 terms; T2T: 161411 nt, 2976 terms; H2H: 168875 nt, 3179 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148550551|ref|NC_009507.1| Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence (length 310228) Swit_5113 370 - 38 - | hypothetical protein Swit_5114 945 - 1457 + | CopG/Arc/MetJ family transcriptional regulator TERM 1 2320 - 2296 - g 72 -4.3 -4.62783 | gap 2, overlap 2297 2298 CACCTATCTGAAAAA CGGCGGCACGT TGGAG ACG-GCCGC-G ACGATGGCAAACCAC Swit_5115 1502 - 2416 + | phage integrase family protein Swit_5116 3042 - 2413 - | phosphoglycerate mutase TERM 2 2659 - 2604 - G 85 -18.3 -3.10493 | gap 3, overlap 2612 GTCCGAACACATAGA CGAGCGAAGCG-GGCGGCA-TGGC-CGC GAG GCGGGCCAGCGCCGCCTCGCAGCGCCCG AGCAAGGCGCGGAAA TERM 3 2651 - 2612 - G 77 -15.1 -3.12874 | gap 3, overlap 2604 ACATAGACGAGCGAA GCG-GGCGGCA-TGGC-CGC GAG GCGGGCCAGCGCCGCCTCGC AGCGCCCGAGCAAGG Swit_5117 3324 - 3043 - | addiction module antitoxin TERM 4 3236 - 3268 + g 73 -9.8 -3.91798 | opp_overlap 3237 3240, overlap 3237 GCCAGGACAGGCAGA AGATCGGCATCGAG GGTCG CTCGATGCCGGCCC TTTGATTCCCGCTTG TERM 5 3267 - 3237 - G 76 -13.3 -3.40299 | opp_overlap 3236 3237, overlap 3240 CCAGGACAGGCAGAA GATCGGCATCGAG GGTCG CTCGATGCCGGCC CTTTGATTCCCGCTT TERM 6 3264 - 3240 - G 73 -15.8 -2.55712 | opp_overlap 3237 3236, overlap 3237 GGACAGGCAGAAGAT CGGCATCGAG GGTCG CTCGATGCCG GCCCTTTGATTCCCG Swit_5118 3577 - 3311 - | addiction module antitoxin Swit_5119 3996 - 4625 + | hypothetical protein Swit_5120 4708 - 5361 + | cobyrinic acid a,c-diamide synthase Swit_5121 5358 - 5672 + | hypothetical protein Swit_5122 7108 - 6236 - | resolvase domain-containing protein TERM 7 6448 - 6463 + g 75 -6.8 -4.4727 | overlap 6449 CCAGCATCGCCTCAA TCCGCT CCCG AGCGGG TTTTCTACCTCTTCC Swit_5123 7514 - 7245 - | transposase TERM 8 8246 - 8267 + G 73 -7.1 -4.11216 | opp_overlap 8219, overlap 8247 AGCCTCGCGCTGGAC CGCCGCCAC GCGC GAGGCGGCC TTTTACGCCTACAGC Swit_5124 7623 - 8996 + | IS4 family transposase Swit_5125 11685 - 9061 - | transposase Tn3 family protein TERM 9 10951 - 10908 - G 79 -11.4 -3.96291 | opp_overlap 10908 GATAAATCGCATAAA GGCCGAGCTGTCGCGCCGGC GCAT GCCGGCGCATCTCCGAGGCC TTTTCACCGGCAACG TERM 10 10908 - 10951 + g 72 -9.2 -4.07568 | opp_overlap 10908 GATAAATCGCATAAA GGCCGAGCTGTCGCGCCGGC GCAT GCCGGCGCATCTCCGAGGCC TTTTCACCGGCAACG TERM 11 11311 - 11298 - G 72 -6.7 -4.371 | GGCACCACAGGAAAA CATGC TCAA GCATG GCATTGATCGACTGG Swit_5126 11699 - 12067 + | hypothetical protein Swit_5127 12109 - 13674 + | peptide chain release factor 3 Swit_5128 14943 - 13687 - | major facilitator transporter TERM 12 14279 - 14295 + g 82 -3.6 -5.00884 | opp_overlap 14258, overlap 14280 GCCGCACCCAGCGCC AGCAGC CAGAA GCTGCG TTTTTTCGCCAGGAT Swit_5129 17425 - 15110 - | TonB-dependent receptor TERM 13 18183 - 18200 + G 75 -8.3 -4.21141 | CAGGAGATGCTGTTC GACGCGC ATGC GCGCGGC TTTGCTTTCTTCGGC Swit_5130 17655 - 19160 + | integrase catalytic subunit Swit_5131 19147 - 19875 + | IstB ATP binding domain-containing protein Swit_5132 21993 - 19945 - | TonB-dependent receptor TERM 14 20227 - 20201 - G 71 -11.5 -3.58726 | overlap 20202 TGGCTCGACACATAA TGGACCGACGC GGAGA GCGTCGGCCCC TGCGCCGGCGTCCAG TERM 15 20226 - 20202 - G 70 -15 -2.75022 | overlap 20201 GGCTCGACACATAAT GGACCGACGC GGAGA GCGTCGGCCC CTGCGCCGGCGTCCA TERM 16 21335 - 21355 + g 74 -12.5 -3.63068 | opp_overlap 21322 TAGGCGGCGGGCACG GTCGCCGCG ACG CGCTGCGAC TTTGGCGTGGTCTGG TERM 17 22237 - 22225 - R 75 -3.4 -4.8384 | overlap 22217 CAAATAACCGAAAAA CCTT GCGGT AAGG CTAATGCGCAACCAA Swit_5133 24025 - 22271 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 18 24413 - 24379 - R 100 -23 -4.91109 | overlap 24357 TGGCGATCACAAAAA TGGTCGGCCAGGCG ACACATG CGCCTGGCCGACCA TAGTGGCTCAAGGGG Swit_5134 25995 - 24439 - | acyl-CoA synthetase TERM 19 24672 - 24652 - G 71 -10.5 -3.72893 | GACTTCCTCACCAAA TTTAGCGTC GCT GACGCCAAA GACCTGCACATCGAC Swit_5135 27470 - 26067 - | aldehyde dehydrogenase TERM 20 27634 - 27587 - R 74 -9.1 -3.85698 | opp_overlap 27592, overlap 27588 27590 CCGCCTTTTCACAAA GGATCGGATGACCGGCGGC GGGCGCCGAA ACCGCCGGTCATCCTCTCT AAGCGAGCCTATTTT TERM 21 27633 - 27588 - R 70 -12.6 -2.91276 | opp_overlap 27592, overlap 27587 27590 CGCCTTTTCACAAAG GATCGGATGACCGGCGGC GGGCGCCGAA ACCGCCGGTCATCCTCTC TAAGCGAGCCTATTT TERM 22 27592 - 27629 + r 79 -15.7 -2.87211 | opp_overlap 27590 27588 27587 TTTTCACAAAGGATC GGATGACCGGCGG CGGGCGCCGAAA CCGCCGGTCATCC TCTCTAAGCGAGCCT Swit_5136 29772 - 27643 - | Pyrrolo-quinoline quinone TERM 23 29498 - 29478 - G 78 -12.5 -3.78934 | TCCCGTCCACAACAA GCGGCGTTG CCT CTACGCCGC GGGTCGAGCCCAGAT Swit_5137 30684 - 29836 - | hypothetical protein TERM 24 30993 - 31043 + r 100 -29 -3.37531 | GGCCATCGTGTTACA TGCCGGGGGGAGTGGCGTGAGGGC GTA GCCCGAGGGCCACTCCCCCCGGCA TTGGTGTAATTTTCA Swit_5138 31823 - 31056 - | IstB ATP binding domain-containing protein Swit_5139 33226 - 31820 - | hypothetical protein Swit_5140 34718 - 33213 - | integrase catalytic subunit TERM 25 34190 - 34173 - G 75 -8.3 -4.21141 | GCCGAAGAAAGCAAA GCCGCGC GCAT GCGCGTC GAACAGCATCTCCTG Swit_5141 35344 - 35066 - | histone family protein DNA-binding protein TERM 26 35595 - 35614 + r 93 -8.5 -5.24129 | opp_overlap 35595 TCTCCCAACTATCAA GCCGCCT CCTTGT GGGCGGC TTTTTTCTACCCGAA Swit_5142 36784 - 35720 - | hypothetical protein TERM 27 35774 - 35763 - G 72 -5.8 -4.26188 | opp_overlap 35765 GTCACATACTGAAAA TCGC TGTT GCGA AACCGCAAGGCTTCA Swit_5143 37858 - 36884 - | patatin Swit_5144 38279 - 37860 - | hypothetical protein Swit_5145 38831 - 39523 + | hypothetical protein Swit_5146 39596 - 39904 + | hypothetical protein Swit_5147 40575 - 39901 - | hypothetical protein Swit_5148 40842 - 40579 - | hypothetical protein TERM 28 41120 - 41083 - R 83 -7.7 -4.62872 | gap 1, opp_overlap 41084, overlap 41084 ACGAACGGGGAAAAA CCATGCGGCACAGATGTG TCG CGCCT-TGTGCCGCATGT TTTGAGCAGAACGCC TERM 29 41084 - 41119 + r 90 -13.4 -4.07568 | gap 1, opp_overlap 41083 41084 CGAACGGGGAAAAAC CATGCGGCACAGATGTG TCG CGCCT-TGTGCCGCATG TTTTGAGCAGAACGC Swit_5149 41880 - 41146 - | hypothetical protein Swit_5150 42085 - 43284 + | phage integrase domain/SAM domain-containing protein Swit_5151 44752 - 43355 - | dihydrolipoamide dehydrogenase TERM 30 44594 - 44578 - G 76 -2.1 -4.67353 | overlap 44579 GCATGTAGCGAAAAA CCTCCGC CGA GCGCAGC AACGCCTTGGTGGGT Swit_5152 46035 - 44773 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase Swit_5153 47425 - 46055 - | pyruvate dehydrogenase subunit beta Swit_5154 48507 - 47425 - | pyruvate dehydrogenase (acetyl-transferring) Swit_5155 48608 - 49519 + | LysR family transcriptional regulator Swit_5156 50216 - 49557 - | hypothetical protein TERM 31 49711 - 49701 - G 76 -2.4 -4.7629 | TGACGAACCGAAAAA GTCC ACC GGGC CGTGCCAACGCTGCC Swit_5157 50731 - 50222 - | hypothetical protein Swit_5158 50945 - 50745 - | hypothetical protein Swit_5159 54040 - 50996 - | conjugative relaxase region-like protein Swit_5160 56346 - 54040 - | hypothetical protein Swit_5161 56626 - 56336 - | hypothetical protein TERM 32 57361 - 57330 - R 91 -19.4 -3.02511 | opp_overlap 57323 CTCACGGCCTGAACA GCCCCCGCCGCGAC CCTT GTCGCGGCACGGGC ATGGGGGGTTCGATG TERM 33 57436 - 57411 - R 100 -18.3 -5.71712 | opp_overlap 57409 CGCCACACAAAAAAA GGGAGAGGCGC GTGC GCGCCCCTCCC CGTCTTGCCTCAATA Swit_5162 57670 - 57446 - | hypothetical protein TERM 34 58034 - 58008 - R 100 -17.3 -3.90922 | ATCTCGTCGAAAGAA CGGGACCGAGC GCGTG GCCCGGTCCCG GCTGCCGTCAGGGGT Swit_5163 58857 - 58042 - | hypothetical protein TERM 35 59305 - 59274 - H 76 -10 -3.86194 | opp_overlap 59267 59300 AATCCCGTCGAGAAA GGCAGCTCGGTGTG ATCT CACGCCGGGGTGCC TGCGCATATGTCCAG TERM 36 59374 - 59396 + H 100 -16.3 -4.08064 | TGTTACCAGCCCCGG CTCCCGCGC CTCGT GCGCGGGAG TTTTGAGCAAGGGTT Swit_5164 59418 - 59702 + | hypothetical protein Swit_5165 60398 - 59709 - | hypothetical protein TERM 37 60456 - 60419 - R 100 -21.3 -4.65895 | overlap 60420 CCTCGCAGCGAAAAA GCAGGAGAGGCCCCGGC GATT GCCGGAGCCTCTCCCGG ACGCGTCACCGACGA TERM 38 60455 - 60420 - R 100 -24.8 -3.39216 | overlap 60419 CTCGCAGCGAAAAAG CAGGAGAGGCCCCGGC GATT GCCGGAGCCTCTCCCG GACGCGTCACCGACG Swit_5166 61541 - 60462 - | hypothetical protein TERM 39 62351 - 62332 - R 93 -13.6 -4.19506 | ACGGCAAGTGGAAAA CGCCACCA GCGG TGGTGGCG CCCGGCTGTGCGCTC TERM 40 62440 - 62400 - R 77 -12.5 -3.6502 | overlap 62401 62404 CAGGCTCGAGCGAAA GGCAGGGCGAAGCCAACGA CAC TCGCCGGCTTCGCCGCACG GATCAGATAGGCCTG TERM 41 62439 - 62401 - R 81 -16 -2.78798 | overlap 62400 62404 AGGCTCGAGCGAAAG GCAGGGCGAAGCCAACGA CAC TCGCCGGCTTCGCCGCAC GGATCAGATAGGCCT TERM 42 62436 - 62404 - R 80 -16.3 -2.66272 | overlap 62401 62400 CTCGAGCGAAAGGCA GGGCGAAGCCAACGA CAC TCGCCGGCTTCGCCG CACGGATCAGATAGG Swit_5167 63045 - 62443 - | hypothetical protein Swit_5168 63407 - 63078 - | hypothetical protein Swit_5169 63795 - 63466 - | single-strand binding protein/primosomal replication protein n TERM 43 63897 - 63910 + r 72 -3.7 -4.63527 | overlap 63898 63898 ACCTGCGCTTCAGCG CGGGG AAAC CCCCA TTTTTCGAGTGGTGC Swit_5170 64712 - 64404 - | PhnA-like protein Swit_5171 66548 - 64728 - | phosphoenolpyruvate carboxykinase Swit_5172 66722 - 67036 + | XRE family transcriptional regulator TERM 44 67886 - 67853 - g 73 -12.5 -3.53012 | gap 1 TCGGCGGCGTCGAAA GTC-TGCTGTCAGCGA AGG TCGCCGACAGCATGTC CGGGCGCAAGCATCG Swit_5173 67039 - 68319 + | sulphate transporter TERM 45 68394 - 68360 - T 100 -19.3 -4.54727 | overlap 68362 CCGGGTAAATGAAAA CAGGGCCCGCTTCGC GAGAA GCGAAGCGAGCCCAG CGGGAGGGTGTGCCC TERM 46 68392 - 68362 - T 100 -20.5 -3.88396 | overlap 68360 GGGTAAATGAAAACA GGGCCCGCTTCGC GAGAA GCGAAGCGAGCCC AGCGGGAGGGTGTGC Swit_5174 68994 - 68443 - | hypothetical protein Swit_5175 69782 - 69216 - | hypothetical protein Swit_5176 70051 - 69779 - | hypothetical protein Swit_5177 71098 - 70160 - | hypothetical protein Swit_5178 71460 - 71176 - | hypothetical protein Swit_5179 72168 - 71473 - | hypothetical protein TERM 47 72228 - 72185 - R 70 -11.6 -3.14211 | gap 1, opp_overlap 72185 72192 ATGGCTCCTCAGGAA GGGCGTGCGGCGCAAGGCCGG TCC CCGGCCTCG-GAGACAGGCCC GGCCGCCATCCTCTT Swit_5180 72914 - 72600 - | hypothetical protein TERM 48 72906 - 72924 + g 81 -9.5 -4.3255 | CTTGCCGAAGGGTGC CGCGGTC ACGCC GGCCGCG TTTCTTCATTGAAAG Swit_5181 73515 - 73105 - | PilT domain-containing protein Swit_5182 73796 - 73515 - | prevent-host-death family protein Swit_5183 74201 - 73809 - | hypothetical protein Swit_5184 74675 - 74205 - | hypothetical protein Swit_5185 75214 - 74678 - | hypothetical protein TERM 49 75262 - 75299 + r 77 -15.6 -2.54523 | opp_overlap 75268, overlap 75267 75268 CGGCCGGGGAAATTG CGAAAAGCCCCCGCTC CGCGAA GAGCGAGGGCCTTTCG TGACTTGGCGTGTGC TERM 50 75293 - 75268 - R 100 -14.7 -4.17089 | opp_overlap 75267 75262 75268 GGGAAATTGCGAAAA GCCCCCGCTCC GCGA AGAGCGAGGGC CTTTCGTGACTTGGC Swit_5186 75781 - 75317 - | hypothetical protein Swit_5187 76245 - 75919 - | hypothetical protein TERM 51 76402 - 76421 + r 71 -9.2 -3.76402 | overlap 76396 TCCGCCACGGCGGCG CGATCGGC CGGC GCCGCTCG TTTGATGGATCGCAT Swit_5188 78121 - 76460 - | hypothetical protein Swit_5189 79325 - 78621 - | hypothetical protein TERM 52 78843 - 78857 + g 73 -7 -4.12599 | CGCATCGACCAGTTT GAGGGC GTC GCCCGC TTTTACGCGCTTCTT Swit_5190 79657 - 80583 + | MucR family transcriptional regulator Swit_5191 81421 - 80651 - | UBA/THIF-type NAD/FAD binding protein Swit_5192 82065 - 81316 - | hypothetical protein Swit_5193 82892 - 82068 - | hypothetical protein TERM 53 82203 - 82183 - G 78 -10.3 -4.13767 | overlap 82186 CGCTTCACCGGAAAA CGACGCGCG CCG CGCGCGGCA AGATCGTCCCAGAGC Swit_5194 83991 - 82900 - | hypothetical protein Swit_5195 84747 - 84322 - | hypothetical protein Swit_5196 86432 - 84783 - | ParB family protein TERM 54 87448 - 87438 - g 70 -3.2 -4.43815 | ATGAACAGATCAAAA GCAT TGA ACGC GACCGCGCCGATGTG Swit_5197 86750 - 87901 + | transposase IS116/IS110/IS902 family protein Swit_5198 89435 - 88467 - | hypothetical protein Swit_5199 90202 - 90804 + | hypothetical protein Swit_5200 93165 - 90886 - | putative nitric-oxide reductase TERM 55 91049 - 91031 - G 73 -9.6 -3.82218 | ATCCACACGAGGAAA TGGATCAG CGG CCGATCCA TAAACGCGGCCGACC TERM 56 91067 - 91054 - G 73 -9.5 -3.91897 | CGGCCGATCCATAAA CGCGG CCGA CCGCG CATAGGCGTAGCCAT Swit_5201 93656 - 93186 - | hypothetical protein Swit_5202 93934 - 93656 - | hypothetical protein Swit_5203 94380 - 93931 - | nitric oxide dioxygenase TERM 57 94127 - 94149 + g 83 -14.9 -3.54424 | overlap 94137 GTATCGACGTGCCGC CCGGCGATC CGCTC GATCGCCGG TTTCAGGACGTCGAG TERM 58 94427 - 94460 + G 81 -12.6 -3.94188 | gap 2, overlap 94422 94421 94428 TAGAGGCTGTCGGTG C-GAGCCG-GTTTGCG CTGG CGCAAACTCGGCTCTG TTATTTCGACTAGAT TERM 59 94428 - 94458 + G 85 -16.3 -3.55946 | gap 1, overlap 94422 94421 94427 AGAGGCTGTCGGTGC GAGCCG-GTTTGCG CTGG CGCAAACTCGGCTC TGTTATTTCGACTAG Swit_5204 94424 - 95209 + | CRP/FNR family transcriptional regulator Swit_5206 96870 - 96094 - | hypothetical protein TERM 60 97388 - 97372 - g 75 -5.1 -4.66953 | overlap 97380 GGAAGACGGCAAAAA GCTCAAG ATG CTCAAGC GTCATCTCATGACGC Swit_5207 97073 - 97624 + | MucR family transcriptional regulator Swit_5208 97653 - 98201 + | hypothetical protein Swit_5209 99064 - 98261 - | hypothetical protein Swit_5210 99231 - 99884 + | hypothetical protein TERM 61 100578 - 100559 - g 74 -12.2 -3.66732 | GAAGTATCTCAATAA CGTGATCG AGGC CGATCACG GAAAGCTCAAGATAC TERM 62 100680 - 100731 + G 70 -12.8 -3.29043 | opp_overlap 100663 100680 100683 100685 CGAGCCCTGCGCAAA GGACAGGCTCGCCCCTGGTGCCTG CAGC CCGGCATCAGGGGCGAGGTGCGCC TTGTGGAGAGAGCTT TERM 63 100730 - 100680 - g 73 -12.5 -3.53444 | gap 1, opp_overlap 100680, overlap 100663 100683 100685 CGAGCCCTGCGCAAA GGACAGGCTCGCCCCTGGTGCCTG CAGC CCGGCATCAGGGGCGAGG-TGCGC CTTGTGGAGAGAGCT TERM 64 100727 - 100683 - g 72 -15 -2.90496 | gap 1, opp_overlap 100680, overlap 100663 100680 100685 GCCCTGCGCAAAGGA CAGGCTCGCCCCTGGTGCCTG CAGC CCGGCATCAGGGGCGAGG-TG CGCCTTGTGGAGAGA Swit_5211 100023 - 100817 + | integrase catalytic subunit Swit_5213 101909 - 104350 + | diguanylate cyclase/phosphodiesterase Swit_5214 104722 - 106431 + | sodium/hydrogen exchanger TERM 65 106610 - 106595 - g 72 -4.6 -4.4078 | overlap 106597 CCTGGGCAAGGAAAA CCCGGA ACTC TCCGCG CAGGAGATTGAAAAG TERM 66 106907 - 106850 - g 72 -14 -3.21099 | opp_overlap 106849 106851 GGCTGGCATGACCAA GGCAGCGCCCTCTTCCGCCGCTGC TTTCTCTACC GCGTCGGCCGAAGCGCGCGCTGCC TGAAATCCCTCTGGA Swit_5215 106506 - 106910 + | histone family protein DNA-binding protein Swit_5216 108230 - 106968 - | HipA domain-containing protein TERM 67 108219 - 108209 - G 72 -5.4 -4.46493 | overlap 108203 CCAAATAGACGAAAA CGAA GGT TTCG ATGTCGGCCATGGCT Swit_5217 108599 - 108234 - | hypothetical protein Swit_5218 109212 - 108667 - | hypothetical protein Swit_5219 110858 - 109320 - | signal transduction histidine kinase TERM 68 110294 - 110317 + g 85 -11 -4.2704 | gap 1 GGCGGGTCCGCTCCT CGCTCGCAGCG AGC TGC-GCGAGCG TTTCTTGCTGCTGGC Swit_5220 111270 - 112196 + | hypothetical protein Swit_5221 112594 - 112193 - | hypothetical protein Swit_5222 113180 - 112608 - | hypothetical protein TERM 69 113071 - 113061 - G 71 -2.4 -4.55295 | overlap 113018 GGCGGGATAAAGAAA CGTC ACG GCCG ACAGCAGCATGATCC Swit_5223 116436 - 113404 - | conjugative relaxase region-like protein TERM 70 115486 - 115510 + g 74 -13.5 -3.30159 | opp_overlap 115465 115464 GAGCTTTTCGCGCCC GGCGGCGATCG CCT CGGTCACCGCC TTGTAGCCGCGTTCG TERM 71 116067 - 116086 + g 83 -5 -4.82901 | gap 1 TTCGCCCGCCGATAT CCTTG-CGA CCT TCGGCGAGG TTTTTCTCGACCCAG Swit_5224 118729 - 116438 - | hypothetical protein TERM 72 117002 - 117035 + g 74 -10.9 -3.79906 | gap 1, overlap 117004 117005 GAGCGGCTCGACCTG CTTGCGCGGCGTCAGC GTC GC-GGCGTCGCGCGTG TTGTTGTAGCCGTAG TERM 73 117004 - 117033 + g 73 -12.1 -3.48378 | gap 1, overlap 117002 117005 GCGGCTCGACCTGCT TGCGCGGCGTCAGC GTC GC-GGCGTCGCGCG TGTTGTTGTAGCCGT Swit_5225 119009 - 118719 - | hypothetical protein Swit_5226 119814 - 120032 + | hypothetical protein TERM 74 120068 - 120035 - T 93 -17.3 -3.53012 | opp_overlap 120063, overlap 120017 CCTCGCCGCCTGAAA CGACCCCGCCGCGCC GACC GGCGCGGCACGGACG CGGGGGGCTCGATGC TERM 75 120063 - 120095 + T 93 -19.8 -2.87132 | opp_overlap 120035 CCGACCGGCGCGGCA CGGACGCGGGGGGC TCGAT GCCCCCCGTGGCCG TCTGTCCCGAGCAGC TERM 76 120138 - 120117 - T 100 -13.7 -5.1861 | opp_overlap 120115 CCGAGCAGCAAAAAA GGAGAGGCC TTGC GGCCCCTCC CCTCGGTTTCAATAT Swit_5227 120371 - 120147 - | hypothetical protein TERM 77 120456 - 120438 - R 84 -17.4 -2.71364 | opp_overlap 120441 120442 GGATCGGGTCAAGGA CCGCCGGC ATC GCCGGCGG CCGCGAAGCGGGCGA TERM 78 120441 - 120483 + r 95 -11 -4.51097 | opp_overlap 120438, overlap 120442 TCGGGTCAAGGACCG CCGGCATCGCCGGCGGCCGC GAA GCGGGCGACGGGGGTACCGA TTTTGTCCTGGTTGC TERM 79 120442 - 120482 + r 82 -14.5 -3.29935 | opp_overlap 120438, overlap 120441 CGGGTCAAGGACCGC CGGCATCGCCGGCGGCCGC GAA GCGGGCGACGGGGGTACCG ATTTTGTCCTGGTTG TERM 80 120800 - 120775 - R 100 -16.9 -5.4833 | CGAGCCAAGAAAAAA GCGACCCCTGC TAAT GCAGGGATCGC CTCAAGTTAGGGTTG TERM 81 120846 - 120828 - R 72 -4.4 -4.63218 | overlap 120829 120830 TTGCTCGCAACAAAA GCCGCGAG TCC CTCGGGTC GCACCGTGTCTGTAG Swit_5228 121556 - 121149 - | hypothetical protein TERM 82 121755 - 121718 - R 95 -13.3 -4.29302 | overlap 121715 121719 121721 GCCAGACGAAAAGAA GGAGGAGAGGCCCCGGC ATGA GCCGGAGCCTCTCCGAT GGGCTCATGCCCGCT TERM 83 121754 - 121719 - R 86 -16.8 -3.16858 | overlap 121718 121715 121721 CCAGACGAAAAGAAG GAGGAGAGGCCCCGGC ATGA GCCGGAGCCTCTCCGA TGGGCTCATGCCCGC TERM 84 121752 - 121721 - R 100 -23.8 -3.13368 | overlap 121719 121718 121715 AGACGAAAAGAAGGA GGAGAGGCCCCGGC ATGA GCCGGAGCCTCTCC GATGGGCTCATGCCC Swit_5229 122734 - 121760 - | hypothetical protein TERM 85 123008 - 122981 - H 83 -6.3 -4.87328 | gap 1, overlap 122982 122983 GAGATAAATAGAAAA CTG-GGGGATGC GGTTG GCACCCCCGCAA GGTGATCGTCACCCG TERM 86 123066 - 123116 + H 73 -8.9 -4.07568 | opp_overlap 123075, overlap 123071 GCTCCGGGAGCGCCA GCGACTAGAGCGCCG-GTCCCGGCC GGC GGCCGGGATGCGCCGCCCCA-TCCC TTTTACCGCGCCCCG TERM 87 123108 - 123075 - H 75 -14.5 -2.80816 | gap 1, opp_overlap 123071 123066 GCGCCAGCGACTAGA GCGCCG-GTCCCGGCC GGC GGCCGGGATGCGCCGC CCCATCCCTTTTACC Swit_5230 123283 - 123498 + | hypothetical protein TERM 88 124100 - 124115 + G 78 -6.1 -4.62069 | ACAAACATCGATTCC TGCCC CTGTAT GGGCA TTTTTGAGGTCGAAG Swit_5231 123734 - 124186 + | limonene-1,2-epoxide hydrolase Swit_5232 125270 - 124416 - | hypothetical protein TERM 89 125325 - 125291 - R 88 -17.2 -3.01712 | gap 1 GTCCTTTGTGCAAGA GTGCCGCAGGCGCGC GGGGGT GCGCACCTGCGGC-C AGCGAAGGGCGGCGC TERM 90 125353 - 125332 - R 91 -18.7 -3.05384 | CCTGCGGCCAGCGAA GGGCGGCGC ATGG GCGCCGCCC GGCGCCTGTCAGAAG Swit_5233 125688 - 125362 - | single-strand binding protein/primosomal replication protein n TERM 91 125826 - 125798 - g 74 -12.4 -3.57561 | gap 1 GGGGAACCCCTGAAA GGCGCTGGCGCGG GCCG CCGCGC-AGCGGC AACACGGGCGCCTGG Swit_5234 125737 - 127173 + | LigA TERM 92 127749 - 127779 + G 77 -15.4 -3.16328 | overlap 127748 127747 CGAGATCACGCCCGT GGGCCTGCCGATCG CCC TGGTCGGCGGGCTC TATCTCTATTTCGTG Swit_5235 127207 - 128514 + | citrate transporter TERM 93 128590 - 128550 - T 100 -18.3 -4.44046 | TCCAGCCGAAATAAA GACAGGACCCGCTGCGC GGGGGAA GCGCGGCGGATCCTGCC AGGGGCTTTCCGCGC Swit_5236 129168 - 128644 - | hypothetical protein Swit_5237 129454 - 129849 + | hypothetical protein TERM 94 129883 - 129870 - T 71 -5.9 -4.26076 | CTAGTCTGATCAAAA CCGCA GCGG CGCGG GCATGGCCAGCCATT Swit_5238 130562 - 129864 - | hypothetical protein TERM 95 130607 - 130587 - H 83 -9 -4.38712 | gap 1 CTTATGGTGAGAAAA GTGCAGGCC CGCT GGCC-GCAC GCGCAGCGCCGGACT Swit_5239 130658 - 131176 + | hypothetical protein Swit_5240 131490 - 131173 - | hypothetical protein TERM 96 131413 - 131390 - G 90 -12.4 -4.46926 | gap 1 CAGGCCATGAGAAAA CGGGC-GACGC GCC GCGCCTGCCCG GTATCGGACAGGGCG Swit_5241 131990 - 131487 - | hypothetical protein Swit_5242 132546 - 132031 - | hypothetical protein Swit_5243 133042 - 132608 - | antirestriction protein TERM 97 132979 - 132952 - G 78 -6.1 -4.57073 | overlap 132965 132966 GACGGCGGCCAAAAA GCGCAGGGAGG AATGTG CCGCGCCGCGC GTCGGGCACGGGGGT TERM 98 133183 - 133152 - R 86 -18 -2.82516 | GGCGGCATGACGACA GGGCCCGCTTCGCA GGCG TGCGAGGCGAGCCC TGTCGGTGGAAAAAG Swit_5244 133666 - 133208 - | hypothetical protein TERM 99 133850 - 133827 - R 78 -3.6 -5.09426 | overlap 133828 CCGAACCCGAAAAAA TGCGGCCCCC TCCT GGGCGCCCCG ACCGTCCTCGGCCTC TERM 100 133952 - 133928 - R 71 -13.5 -2.61264 | overlap 133927 CCGGCCAGCGACAAC CTCGCGCACCG ATC CGGCGTGCGAG TCCGTGTCGCGGCTA Swit_5245 134934 - 133975 - | hypothetical protein Swit_5246 135390 - 135031 - | hypothetical protein Swit_5247 135506 - 135997 + | Ferritin, Dps family protein TERM 101 136120 - 136142 + F 100 -20.6 -3.87815 | GTTTGTCGTTCACAC CCGCCCTGCG TCC CGCAGGGCGG TTTATCGACATGACC TERM 102 136360 - 136313 - g 75 -4.6 -4.60041 | gap 1 AGCTATGCTGAAAAA CAGGGAGACGGCGG-TGAGACCC ACC AGGTCGCAGCCGACGGCGCGCCG GTGCTCACCACGGGC TERM 103 138248 - 138274 + G 72 -15.2 -2.89742 | opp_overlap 138262 138263 ATCTTTGCCAATGCC GGCATCCTCGAG AAG CTCGACGATGCC TGTATCGAGCTTGGC Swit_5248 136172 - 138379 + | catalase TERM 104 138534 - 138506 - g 93 -17.5 -3.64703 | opp_overlap 138500 CGCGGTCGAGGCAAA GGATAAGCGGGGC TAT ACCCCGCTCATCC TGGCGGCCTATCATG Swit_5249 138369 - 138941 + | ankyrin TERM 105 139731 - 139714 - f 73 -12.7 -3.14132 | opp_overlap 139713 139710 CCCTTGCGCGACGAA GCCGGTG CGAT CACCGGC ATGATTGGCTCGTCG TERM 106 140098 - 140123 + F 70 -7.6 -4.08767 | gap 2 CGGGGTCGCTGCCTG CGCGATGCGGCG GGAA CGCCG-A-CGCG TTTTCCGGGCGTCAC TERM 107 142078 - 142091 + G 72 -3.8 -4.56597 | GCGAGACGCTGGCCC GGGT GTTCGA ACCC TTTTTCACCACCAAG Swit_5251 141342 - 143057 + | histidine kinase Swit_5252 143129 - 143629 + | hypothetical protein Swit_5253 144699 - 143734 - | hypothetical protein Swit_5254 145629 - 144985 - | hypothetical protein TERM 108 145630 - 145688 + H 72 -4.3 -4.57073 | gap 1, opp_overlap 145636, overlap 145630 AACATCGTAGCTCAT -GGGAAAGTCTCCGAGAGGCCGAGCGAT CCAC GTCGCTCGCCCTCCCGGCCCCCCTCCCC TTTTTCCGGCGCCTG TERM 109 145681 - 145636 - H 73 -11 -3.60627 | opp_overlap 145630 145630 GTAGCTCATGGGAAA GTCTCCGAGAGGCCGAGCGA TCCACG TCGCTCGCCCTCCCGGCCCC CCTCCCCTTTTTCCG Swit_5255 145805 - 146518 + | hypothetical protein TERM 110 146593 - 146604 + G 79 -2.2 -4.83169 | AGGGAGTTTTCGCCA TGGG CATG TCCA TTTTTCTCGACCGGT Swit_5256 146592 - 147080 + | hypothetical protein Swit_5257 148154 - 147126 - | hypothetical protein Swit_5258 148783 - 148271 - | nuclease Swit_5259 149621 - 149025 - | hypothetical protein TERM 111 149188 - 149232 + g 73 -12.1 -3.53012 | gap 1, opp_overlap 149190 149191, overlap 149190 149191 ACATGCCCGTCGGAA AACCG-GACCGGCGCGGGCA GCTTGA TGCGCGCGCCGGTCTCGATC TTTCGGGAACGGCGG TERM 112 149230 - 149190 - G 100 -16.9 -4.07687 | gap 1, opp_overlap 149188 149190 149191, overlap 149191 ATGCCCGTCGGAAAA CCG-GACCGGCGCGGGCA GCTTGA TGCGCGCGCCGGTCTCGA TCTTTCGGGAACGGC TERM 113 149190 - 149230 + g 79 -14.7 -3.34398 | gap 1, opp_overlap 149190 149191, overlap 149188 149191 ATGCCCGTCGGAAAA CCG-GACCGGCGCGGGCA GCTTGA TGCGCGCGCCGGTCTCGA TCTTTCGGGAACGGC TERM 114 149191 - 149229 + g 77 -18.2 -2.60496 | gap 1, opp_overlap 149190 149191, overlap 149190 149188 TGCCCGTCGGAAAAC CG-GACCGGCGCGGGCA GCTTGA TGCGCGCGCCGGTCTCG ATCTTTCGGGAACGG TERM 115 149229 - 149191 - G 82 -18.2 -3.04398 | gap 1, opp_overlap 149191 149190 149188, overlap 149190 TGCCCGTCGGAAAAC CG-GACCGGCGCGGGCA GCTTGA TGCGCGCGCCGGTCTCG ATCTTTCGGGAACGG Swit_5260 149980 - 149663 - | hypothetical protein Swit_5261 150926 - 149991 - | hypothetical protein TERM 116 150840 - 150852 + g 75 -10.5 -4.08216 | CCAGGGCCGGGTCCA GGGCG GTA CGCCC TTTTCAAGGCGATCG TERM 117 150938 - 150995 + r 72 -13.4 -2.74144 | gap 2, opp_overlap 150936 150937 150947 150952, overlap 150938 150955 ACATGATGGAAAACT CCTCACAGACGAGACGACCACCGGCGCG CGGA CACGCCGGTGGTCG-CTTG-CGGACAGG ATTTGAGGCTCAGGC TERM 118 150987 - 150947 - R 93 -19.8 -2.89323 | gap 1, opp_overlap 150938 150938 150955, overlap 150936 150937 150952 AAAACTCCTCACAGA CGAGACGACCACCGGCGCG CGGA CACGCCGGTGGTCG-CTTG CGGACAGGATTTGAG TERM 119 150983 - 150952 - R 100 -23.8 -2.88999 | opp_overlap 150938 150938 150955, overlap 150947 150937 TCCTCACAGACGAGA CGACCACCGGCGCG CGGA CACGCCGGTGGTCG CTTGCGGACAGGATT TERM 120 150955 - 150980 + r 79 -16.1 -2.52464 | opp_overlap 150952 150947 150937, overlap 150938 150938 TCACAGACGAGACGA CCACCGGCGCG CGGA CACGCCGGTGG TCGCTTGCGGACAGG Swit_5262 153194 - 151005 - | ParB family protein TERM 121 153386 - 153367 - H 71 -5.6 -4.25283 | opp_overlap 153373 153375, overlap 153371 ACCTGGTCAGGAAAA GGAACCGG TTGG CCGGTCAC GGCCCCTCTGTTAGG TERM 122 153487 - 153457 - H 77 -12.6 -3.65991 | AGTCCGTGAACACAA GCAACTCGAAAACC ATC GGTTTCCGGGCTGC CGTCGCGCATGTCCA Swit_5263 153529 - 153852 + | hypothetical protein TERM 123 155209 - 155233 + G 71 -2.7 -4.56597 | GCCCGCCACCCTGCC GCTGATCCAGA GCT TCGTGACCAGC TTTTTGCCGGAAGAG Swit_5264 153932 - 155785 + | hypothetical protein Swit_5265 160291 - 156053 - | putative methylase/helicase TERM 124 159489 - 159502 + g 71 -2.4 -4.56597 | overlap 159469 GCGATGCTCGTGCCA TGCT TGGTGT AGCA TTTTTCGAGCCGCAG TERM 125 161783 - 161809 + G 79 -15.1 -3.28712 | ATGCTGCTGCTCGCG GGCGTCCTGCG CTGGA CGCGGGGCGCC TTCTACCGCCGGACG Swit_5266 160490 - 162709 + | hypothetical protein TERM 126 162835 - 162874 + G 76 -14.1 -3.50393 | TTGTCCGGCCTGGAG GCGCGCCGCCTGGCGCC GCTCTG GGCGCGGCTCGGCGCGC TTCTCTACCATCACG Swit_5267 162709 - 163035 + | hypothetical protein TERM 127 163193 - 163205 + G 91 -3.3 -5.44119 | opp_overlap 163188, overlap 163163 CGCAAGGCAAGACGG CACGG TCG CCCTG TTTTTTTCCGGTGAC Swit_5268 163032 - 163766 + | type IV secretory pathway VirJ component-like protein TERM 128 164998 - 164979 - g 89 -7.8 -4.87133 | overlap 164981 ACTTGCCAAAGAAAA CGGCCTTG GCCG CAAGCCCG GTGAACCGGCACCGG Swit_5269 164608 - 165087 + | transcriptional regulator Swit_5270 166805 - 165126 - | signal transduction histidine kinase Swit_5271 167796 - 166945 - | virulence-associated protein E Swit_5272 168726 - 167881 - | spermidine synthase-like protein Swit_5273 169508 - 168777 - | hypothetical protein TERM 129 169899 - 169869 - R 95 -20.5 -3.14564 | CGATGCTGCCAGGAA GGCAGCGCCCTCG TCGGC CGAGGACGCTGCC CTGGTGCCGCCCTAT Swit_5274 171416 - 169911 - | protease Do TERM 130 171454 - 171479 + r 72 -13.9 -2.79183 | opp_overlap 171469 TCTCGAGATGGGATG GTCGGCGCGGC AACA GCCACGCCGGC TCTGGTCGACGTCGG Swit_5275 172162 - 171593 - | hypothetical protein TERM 131 173376 - 173362 - H 74 -4.9 -4.60041 | opp_overlap 173362 173363 173371, overlap 173363 173364 ATCCATTTTTAAAAA CGCCC AAGCG GAGCG CGGGAGCTTCTATAT Swit_5276 174080 - 175195 + | initiator RepB protein Swit_5277 175630 - 175235 - | hypothetical protein TERM 132 175356 - 175330 - G 71 -10.1 -3.69395 | gap 1 CGCACCAGCGAACAA GCCGGTCG-CGC TCGG GCGGCGACAGGC GCATGCTGATGTGCA Swit_5278 176309 - 175623 - | stability/partitioning determinant Swit_5279 176671 - 177285 + | hypothetical protein TERM 133 177564 - 177544 - f 79 -8.3 -4.26076 | overlap 177546 GCAGCCCCAGGAAAA TAGGTCGAT TTC ATCGACCTC GTGGCCTTCCAGCTG TERM 134 177562 - 177546 - f 76 -10.9 -3.7331 | overlap 177544 AGCCCCAGGAAAATA GGTCGAT TTC ATCGACC TCGTGGCCTTCCAGC TERM 135 178048 - 178023 - f 90 -15.5 -3.72576 | opp_overlap 178023 CTGGCGTTTATCAAA CGGGAGCAACC CCTC GATTGCTCCCG TTTGATGGAATGTGA TERM 136 178023 - 178048 + F 81 -13.3 -3.75665 | opp_overlap 178023 CTGGCGTTTATCAAA CGGGAGCAACC CCTC GATTGCTCCCG TTTGATGGAATGTGA Swit_5280 178072 - 178989 + | resolvase domain-containing protein TERM 137 179031 - 179004 - f 74 -12.7 -3.32521 | overlap 179005 ACCAGAGCTCGATAA TGTGCCGCGTC TTGTGG GGCGCGGCACA TGGCGCGGCACCTGA Swit_5281 180401 - 180814 + | hypothetical protein TERM 138 180838 - 180868 + F 84 -17.5 -2.82015 | TATAATCGGTAGCAG GGGGCCCGGCGCG TGGGT CGCGTCGGGCCCA TCTGATGAATATACG TERM 139 181090 - 181123 + F 71 -10.9 -3.47345 | gap 1, opp_overlap 181077, overlap 181093 181094 ATCCTCTCCGAGCGC GATACGCGCGCGGTCC TGG GGCCCGCGAGCG-GTC TTGTCGTCTGCCATT TERM 140 181094 - 181120 + F 74 -15 -2.58069 | opp_overlap 181077, overlap 181093 181090 TCTCCGAGCGCGATA CGCGCGCGGTCC TGG GGCCCGCGAGCG GTCTTGTCGTCTGCC TERM 141 181353 - 181336 - g 70 -8.4 -3.91084 | GCAGCGCCAAGGAAA GCGGCT TCCACC AGCCGC GCGCCGCCCTTCCGC TERM 142 182207 - 182193 - g 73 -7.8 -4.14725 | TACCGAAATGACAAA CGAAGG GAC CCTCCG GCATCCGTCCTTTCT TERM 143 182483 - 182467 - g 78 -9.5 -4.20516 | GGCCGAGCCAAGAAA TGCTTCT TCC AGAAGCA TGACGCGGGCAGTTT Swit_5282 181186 - 183162 + | DNA ligase D Swit_5283 183159 - 183968 + | exodeoxyribonuclease III Xth Swit_5284 183965 - 184459 + | hypothetical protein TERM 144 184997 - 184982 - g 71 -11.8 -3.65046 | TGCCGATCTCAAGAA GCGCGG GCTA CCGCGC GAGAAGGTCCTGGCC Swit_5285 184563 - 185678 + | putative DNA topoisomerase I Swit_5286 186982 - 185894 - | alpha/beta hydrolase domain-containing protein TERM 145 186133 - 186171 + g 78 -17.4 -2.78384 | opp_overlap 186132 TTGCCGCGACGAGAT TGATGCGCGGATCGGTTG CGT CAGCCGGGCCGCGCGTCG TGTGATGGAGGAACC Swit_5287 187167 - 187703 + | hypothetical protein Swit_5288 187727 - 189580 + | PEBP family protein TERM 146 189595 - 189617 + F 100 -17 -4.13945 | opp_overlap 189594 189589 ACGACCGAACGAGAG GCTGGTGCGC GGT GCGCACCGGC TTTTCCGCTGCGGCT Swit_5289 189828 - 190097 + | hypothetical protein TERM 147 190115 - 190099 - f 76 -9.3 -3.99324 | CTCGACGATCATAAA CGGCCCG CCA CCGGCCG CGATGGGCTGGACCG Swit_5290 190276 - 191391 + | MscS mechanosensitive ion channel Swit_5291 192451 - 191600 - | short-chain dehydrogenase/reductase SDR TERM 148 191695 - 191727 + g 72 -13.3 -3.21395 | opp_overlap 191684, overlap 191693 GGAAGGCGGGGGCGA CCTCGTTGGGCTGTC CGG GCCGGCCCATCGGGG TGTTCTCGCCAAAAT TERM 149 192008 - 191996 - G 77 -4.1 -4.77036 | opp_overlap 191996 CTGGACGAGGAAAAA CATCC CGA AGATG TTGGTCTGGAACGTG Swit_5292 192720 - 193520 + | hypothetical protein TERM 150 193534 - 193557 + T 71 -9.6 -3.7511 | gap 1, overlap 193531 193529 GATTTGACGGGTGAG GGGCTG-TCTC GTT GAGATCGGCCC TTCTCTTGTCCGACG Swit_5293 194242 - 193631 - | two component LuxR family transcriptional regulator Swit_5294 195734 - 194232 - | PAS/PAC sensor signal transduction histidine kinase TERM 151 195522 - 195503 - G 74 -16.4 -2.78384 | GGTGGTCGCACCACA GGCCGGCG GCTG CGCCGGCC AGCGAAGCCATCGCG TERM 152 195940 - 195964 + G 72 -4.2 -4.56597 | gap 1, opp_overlap 195940, overlap 195940 195940 195946 GCTCGGCTTCACCAA GGT-CCTGCGC TGGT GCGCGGACACC TTTTTCGCCCAGCGC Swit_5295 195860 - 196549 + | alternative oxidase Swit_5296 196579 - 196938 + | response regulator receiver protein Swit_5297 196940 - 197323 + | sec-independent protein translocase protein TatC Swit_5298 197320 - 197613 + | hypothetical protein Swit_5299 197672 - 198121 + | nitric oxide dioxygenase TERM 153 199335 - 199374 + G 70 -12.8 -3.30338 | gap 1 GCCGTTCTCTTGAGA TCGCCATCGCCTGGCGCGG CGG CCGCGACATGCGA-GGCCA TTCTCGAAGCGTTCT Swit_5300 198195 - 200327 + | periplasmic sensor diguanylate cyclase/phosphodiesterase Swit_5301 200762 - 200382 - | hypothetical protein Swit_5302 201335 - 200802 - | hypothetical protein Swit_5303 202099 - 201509 - | hypothetical protein Swit_5304 202186 - 203334 + | transcriptional regulator, CadC TERM 154 203480 - 203523 + F 71 -5.3 -4.49316 | overlap 203483 CGCCCTCGCACGGGA CG-ATGATTCCTACCGGCGCC ATCT GGCGAAGG-AGGAAGCATGCG TTTGTTCTTCATCGT Swit_5305 203555 - 203896 + | camphor resistance protein CrcB TERM 155 204057 - 204025 - f 86 -8.3 -4.65916 | CCGACCGCAACAAAA TTGGATGAGCGCGGC TAT ACCGCGCTGGGCCAA TGATACAGGAGCGAG TERM 156 204316 - 204261 - g 78 -10.5 -4.11216 | opp_overlap 204294, overlap 204263 204296 TCGTGATCCCGAAAA GAGGC-GTCGCTTCGACGCCGGC GAGATCGACGAG ACCGGCGCCGA-GCGACCGCCGC AGGGCTATTACCGGG TERM 157 204279 - 204263 - g 78 -13.7 -3.65542 | overlap 204261 GTGATCCCGAAAAGA GGCGTCG CTT CGACGCC GGCGAGATCGACGAG Swit_5306 204082 - 204975 + | heat shock protein DnaJ domain-containing protein Swit_5307 204972 - 205310 + | hypothetical protein Swit_5308 205577 - 205888 + | hypothetical protein Swit_5309 206125 - 207321 + | acetyl-CoA acetyltransferase TERM 158 207386 - 207423 + T 71 -12.5 -3.03124 | opp_overlap 207379 207378 ATGCAAAGGCCGGCG CGCTTCCCCCCTAGGCG GAAC CGCCCGGAGGGGTGGCG TCTTGCGCGCTGGCG Swit_5310 207644 - 207396 - | hypothetical protein Swit_5311 209029 - 207884 - | catalase Swit_5312 209075 - 210070 + | short-chain dehydrogenase/reductase SDR TERM 159 210437 - 210450 + G 71 -3.1 -4.58395 | gap 1 GGGACGCGCTGCATC CG-CTG CAA CAGGCG TTTTTGGACCATGAC Swit_5313 210139 - 210645 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Swit_5314 210642 - 211655 + | molybdopterin dehydrogenase, FAD-binding TERM 160 212887 - 212909 + G 75 -9 -4.18018 | opp_overlap 212875 212874 AAGGCTCTGCGCGAA GCCTATGCGC AGG GCGCCCAGGC TTTTGGATGGGACAG Swit_5315 211666 - 213918 + | xanthine dehydrogenase, molybdenum binding subunit apoprotein Swit_5316 214398 - 213988 - | hypothetical protein Swit_5317 215295 - 214522 - | RES Swit_5318 215968 - 215288 - | hypothetical protein TERM 161 215532 - 215566 + g 72 -5.1 -4.46112 | gap 2, overlap 215539 AGATCATTGCCATCG TGGCGCAGCGCGAAGAT CCT ACCTTCGCGCT-T-CCA TTTATTTGGCTGGGC TERM 162 215539 - 215561 + g 73 -12 -3.41807 | overlap 215532 TGCCATCGTGGCGCA GCGCGAAGAT CCT ACCTTCGCGC TTCCATTTATTTGGC TERM 163 216080 - 216047 - H 100 -13.9 -4.62069 | opp_overlap 216050, overlap 216050 GGTCGAGTCCAAAAA GCATGTGCCGCGC TTTGTGCC GCGCGGCACATTC TCGCTTCGACAAGTG TERM 164 216050 - 216077 + H 83 -14.2 -3.41878 | opp_overlap 216047 216050 CGAGTCCAAAAAGCA TGTGCCGCGC TTTGTGCC GCGCGGCACA TTCTCGCTTCGACAA TERM 165 216077 - 216050 - H 80 -14.2 -3.25166 | opp_overlap 216050, overlap 216047 CGAGTCCAAAAAGCA TGTGCCGCGC TTTGTGCC GCGCGGCACA TTCTCGCTTCGACAA Swit_5319 216199 - 216900 + | cell cycle transcriptional regulator CtrA TERM 166 216967 - 216982 + T 75 -11.8 -3.6715 | ATGCCGTCCCTTTGA GCGCGG CAGT CCGCGC TTTCCCCTTGGGTGC Swit_5320 218038 - 217037 - | cell shape determining protein MreB/Mrl TERM 167 217959 - 217930 - G 72 -15.1 -2.88999 | gap 1, opp_overlap 217958, overlap 217948 CCGCGACACAGCATA GCGACGG-CTCGTC GAA AACGAGGCCGTCGC CGCGACGCAGGACGC Swit_5321 219576 - 218227 - | glutamate dehydrogenase Swit_5322 220209 - 219730 - | hypothetical protein TERM 168 220365 - 220382 + H 74 -2.6 -4.95957 | opp_overlap 220360 220358 220357, overlap 220366 CAGCAAAGCATCCGT AGCGGT TGATAT ACCGCG TTTTTGCTTGGTTTA Swit_5323 220441 - 222792 + | histidine kinase TERM 169 223605 - 223585 - g 78 -6.9 -4.57569 | overlap 223587 GGAGCCTTCGAAAAA GAGATCAAG TCA CTTGATCTG CAGGACTTCTACTTC TERM 170 223603 - 223587 - g 73 -9.5 -3.90316 | overlap 223585 AGCCTTCGAAAAAGA GATCAAG TCA CTTGATC TGCAGGACTTCTACT TERM 171 224576 - 224560 - g 78 -9.4 -4.30177 | GACGATATCAAGAAA CTGCGC CGTAT GCGCAG CTGCGAACTTCAGGC Swit_5324 222796 - 224697 + | hypothetical protein Swit_5325 224792 - 225073 + | XRE family transcriptional regulator TERM 172 225736 - 225759 + G 71 -3 -4.57073 | gap 1, overlap 225715 225737 TCCTGAACGCGCCTG GCTCAGGCGCC GCT GTCGCC-GAGG TTTTTGCCCAGGCTG Swit_5326 225066 - 226229 + | aminotransferase, class V Swit_5327 226223 - 227161 + | hypothetical protein TERM 173 227463 - 227483 + G 78 -8.9 -4.29396 | CTGGGATGGGACGCG GCGGGCGAC AAT GTTCCCCGC TTTTGGTCAATCCTT TERM 174 229496 - 229521 + G 75 -8.9 -4.10657 | opp_overlap 229488 TATCGAAGCTGGACA GGGCGACCGTG TTGG CGTGGTCGACC TTTTCCAGCATCTGC Swit_5328 227154 - 230621 + | hypothetical protein Swit_5329 230618 - 231454 + | phosphoadenosine phosphosulfate reductase Swit_5330 232291 - 231485 - | hypothetical protein Swit_5331 232543 - 232295 - | hypothetical protein Swit_5332 232841 - 233332 + | hypothetical protein Swit_5333 233345 - 233908 + | hypothetical protein TERM 175 233974 - 233962 - T 76 -7.7 -4.30844 | ATGTTATGATGAAAA CTGCT CTC AGCAG GAAAGGTTGTGGTAC Swit_5334 239799 - 234589 - | cell divisionFtsK/SpoIIIE TERM 176 235701 - 235671 - G 90 -13.2 -4.03234 | TTGCCTGGAGAGAAA GCTGCTGCAACGCG CTG CGGGTCGCTGCAGC AACCGAGACGAGCCA Swit_5335 241328 - 239796 - | hypothetical protein Swit_5336 243162 - 241321 - | hypothetical protein TERM 177 241939 - 241915 - G 81 -12.2 -3.9392 | gap 1 GGGGATGCGAAAGAA CATGGC-GCGC CGTT GCGCCGCCATG GTCGCTAGAAAAGGA Swit_5337 243762 - 243349 - | GreA/GreB family elongation factor TERM 178 243732 - 243747 + g 77 -11.8 -3.95424 | overlap 243742 CGATCATATGGATGG GCGGCC GGCG GGCCGC TTTGGTCTTGGTCAT TERM 179 243872 - 243827 - H 84 -16.9 -2.74563 | gap 1 GTCACATTGCAATGA TCGAGCCCCGGGCT-CGGGGCA GGA TGCGCCGGAACCCGGGGCTAAA TGCCCGCGAGAAGCT TERM 180 245189 - 245208 + G 82 -3.4 -5.055 | CCACGTCTCCCTTCC GCGGCCAT TTGC ACGGCAGC TTTTTTCCAAGTTCG TERM 181 246022 - 246000 - g 79 -14.8 -3.39327 | opp_overlap 246000 246001 GGGGGAGACGCACAA GCGCCGCACG CGC CGTGCGCCGC GCGAAGCTTCGGTGT TERM 182 246500 - 246531 + G 78 -13.6 -3.53761 | gap 1, overlap 246502 246508 TAGCCGAGGTGCGCG CCCGGCGGCTGGCCG CGC CGTCC-GCCGCCGTG TTTGGAACGCGGTTC TERM 183 246502 - 246529 + G 79 -14.8 -3.34517 | gap 1, overlap 246500 246508 GCCGAGGTGCGCGCC CGGCGGCTGGCCG CGC CGTCC-GCCGCCG TGTTTGGAACGCGGT Swit_5338 243850 - 249654 + | hypothetical protein TERM 184 249741 - 249772 + F 79 -13.6 -3.42459 | overlap 249742 249763 TTCTGAATCTCGATC TGCCGGCAGCGAGG GCGA CCTTGCGGCCGGCC TTCATCTTATGGATC TERM 185 249742 - 249771 + F 83 -17.1 -2.64993 | overlap 249741 249763 TCTGAATCTCGATCT GCCGGCAGCGAGG GCGA CCTTGCGGCCGGC CTTCATCTTATGGAT Swit_5339 249976 - 250191 + | cold-shock DNA-binding protein family protein Swit_5340 250468 - 250169 - | hypothetical protein TERM 186 250196 - 250227 + g 95 -10.2 -5.06414 | gap 1, overlap 250202 CGCAGGACTGAGCGA CGAGGAGGGCGGCAT GAA ATGCCGCCCTT-TGG TTTTTATTCGAAAGG TERM 187 250202 - 250222 + g 100 -16.9 -4.43037 | overlap 250196 ACTGAGCGACGAGGA GGGCGGCAT GAA ATGCCGCCC TTTGGTTTTTATTCG Swit_5341 250805 - 250605 - | hypothetical protein TERM 188 251225 - 251281 + r 76 -10.7 -3.72742 | gap 1, opp_overlap 251223 TCGAGAAGACAGAGC GGGGGGGTCA-AGCGGCTCGCGGCGC CGACCA GCGCTGCGGGCCGCACTCACCGGCTC TTCTGTTCGTGGTGA Swit_5342 252204 - 251317 - | hypothetical protein Swit_5343 252865 - 252305 - | PRC-barrel Swit_5344 253023 - 253586 + | cyclase/dehydrase Swit_5345 253592 - 254791 + | alcohol dehydrogenase Swit_5346 255166 - 254810 - | response regulator receiver protein TERM 189 255269 - 255321 + r 75 -14.2 -2.72991 | opp_overlap 255303, overlap 255310 GTCACTCGCTGGATC GTCG-TTGCGGCAATGCGGCTGCTCC GTT GGAACAGCCGCGATG-CGCAACCGCC TAATTGCGCATGTCG Swit_5347 255743 - 255321 - | hypothetical protein TERM 190 256196 - 256174 - g 75 -9.1 -4.19238 | gap 1 CCGCGAAGCTCAAAA CGGCGGCCGC GGCC GCGA-CGCCG GCGATCGCGCCTGAT Swit_5348 255882 - 256436 + | hypothetical protein TERM 191 256502 - 256536 + T 75 -12 -3.54935 | ATCATGAGGCGCCAG CGCTCCGAACGGGCGC TGT GCGCTCGTCAGTAGCG TTTGAGCAGAGTTTC Swit_5349 257034 - 256528 - | hypothetical protein TERM 192 256895 - 256883 - G 72 -9.1 -4.04174 | GTCGAGAGAATGAAA GCCAG CGG CTGGC CCATGATCGTGGCGG Swit_5350 257153 - 257338 + | hypothetical protein TERM 193 257348 - 257374 + F 86 -15.9 -3.59979 | opp_overlap 257325 257347 257344 GCCTGACGACAGGAC GGCGGAGCCGA GAACG TCGGTTCCGCC TTTCCGCTGAAGCGG TERM 194 258424 - 258444 + G 71 -10.3 -3.7732 | overlap 258425 258427 ATCCGGCCGAGGCCC CGGCGCGCG GAA CGCGCGTCA TTCTTCATCTCAAGG TERM 195 258706 - 258730 + G 72 -4.9 -4.42653 | ACTATCGCGCCGAGG GCGTGCACG AATATAA TGTGCTCGC TTTTGTGCCTGAGAT TERM 196 259718 - 259736 + G 72 -5.8 -4.37658 | overlap 259720 CGCCGACGGGGAACT GCCGCTCG ATC CGCGCGCC TTTTCTGAACGGCTT Swit_5351 257895 - 259787 + | heat shock protein 90 Swit_5352 260343 - 260627 + | hypothetical protein Swit_5353 260749 - 264180 + | multi-sensor hybrid histidine kinase TERM 197 264307 - 264333 + G 71 -2.1 -4.58395 | opp_overlap 264292, overlap 264308 264309 GCGGCGCCTCGTGCA GGCGCGGAGCC AGTTG GGCTTTGCGAG TTTTTCGGCGATGCA Swit_5354 264191 - 265015 + | MCP methyltransferase, CheR-type Swit_5355 265012 - 265587 + | CheB methylesterase Swit_5356 265584 - 266717 + | response regulator receiver sensor signal transduction histidine kinase Swit_5357 267236 - 266733 - | hypothetical protein TERM 198 267078 - 267124 + g 73 -12.2 -3.53012 | gap 1, overlap 267105 TTCCGCTTCGCCGCA CCTTGGGCAGCAGCCGCGCAG GCCGCG CAGCGCGGCGG-TGCCCAGCG TTTCGGGCAGAGCGC Swit_5358 267689 - 267384 - | hypothetical protein Swit_5359 267890 - 268159 + | hypothetical protein Swit_5360 269502 - 268207 - | hypothetical protein Swit_5361 269613 - 270614 + | lytic transglycosylase, catalytic Swit_5362 271218 - 270670 - | hypothetical protein Swit_5363 271826 - 271314 - | hypothetical protein TERM 199 271344 - 271360 + g 78 -6.6 -4.57837 | GGATGGACTTGTCTG TTGCGA ATCGG TCGCAA TTTTTCCGGCGGTCT Swit_5364 272080 - 272508 + | hypothetical protein Swit_5365 272550 - 272855 + | Type IV conjugative transfer system protein TraL Swit_5366 272857 - 273423 + | TraE family protein Swit_5367 273420 - 274223 + | hypothetical protein TERM 200 274470 - 274455 - g 75 -9 -4.12188 | CGACGACGGTGAAAA GGTCGA GGTG TCGACC AAGGATCTGGTGAAC TERM 201 275402 - 275386 - g 71 -2.2 -4.62471 | overlap 275387 GGCAAGCGCGAAAAA CTCTCG GCGGG CGAGAT CCTGGAGGGTGGCTT Swit_5368 274228 - 275559 + | TraB pilus assembly family protein Swit_5369 275546 - 276427 + | hypothetical protein Swit_5370 276403 - 277416 + | Type IV conjugative transfer system protein TraV Swit_5371 277418 - 280012 + | Type-IV secretion system protein TraC TERM 202 280152 - 280170 + G 72 -5.2 -4.42743 | overlap 280155 CCTGTCGTCGCTGCT GATCAGCT GGG GGCTGTTC TTTCTCTTCTTTCTG Swit_5372 280018 - 280392 + | hypothetical protein TERM 203 280461 - 280439 - g 76 -13.4 -3.53012 | opp_overlap 280438 280437 GCGCCGTCTGGCAAA GCCGCGCG CTCGCGC CGCGCGGC CCTTTTCGCAGGATT Swit_5373 280385 - 281032 + | hypothetical protein TERM 204 281433 - 281473 + G 85 -10.9 -4.36914 | opp_overlap 281412, overlap 281435 281438 CGCCTGGGCGAATTG TTGACGCCCGGCGCGACCG GGC CGGTCCCGGCGGGCTGCTA TTTTGTCGGGACGCC TERM 205 281435 - 281471 + G 82 -13.5 -3.79419 | opp_overlap 281412, overlap 281433 281438 CCTGGGCGAATTGTT GACGCCCGGCGCGACCG GGC CGGTCCCGGCGGGCTGC TATTTTGTCGGGACG TERM 206 281438 - 281468 + G 82 -18.2 -2.98387 | opp_overlap 281412, overlap 281435 281433 GGGCGAATTGTTGAC GCCCGGCGCGACCG GGC CGGTCCCGGCGGGC TGCTATTTTGTCGGG Swit_5374 281013 - 281576 + | type IV secretory pathway protease TraF-like protein Swit_5375 281573 - 282226 + | Type-F conjugative transfer system protein TraW Swit_5376 282226 - 282498 + | hypothetical protein Swit_5377 282495 - 283517 + | TraU family protein Swit_5378 283528 - 284271 + | Type-F conjugative transfer system pilin assembly protein TrbC Swit_5379 284271 - 286133 + | conjugal transfer mating pair stabilization protein TraN Swit_5380 286171 - 286506 + | hypothetical protein TERM 207 287206 - 287220 + G 79 -2.7 -4.87328 | TCCTGACGAGCCTCG GCCAG CGCTA CGGGC TTTTCTATTTCTATG Swit_5381 286722 - 287537 + | TraF-like protein Swit_5382 287537 - 289000 + | TraH family protein Swit_5383 289017 - 291833 + | TraG domain-containing protein TERM 208 292171 - 292187 + G 86 -3 -5.22006 | gap 1, opp_overlap 292163, overlap 292174 CTAAGGACCTCGACC TGTCGAG CAAC CTCG-CA TTTTTGTTCTCGTGG Swit_5384 292116 - 292433 + | hypothetical protein TERM 209 292955 - 292975 + G 81 -12.5 -3.90922 | TTCCTGATGTTCACG GGCGAGAGC ATT GCGCTCGCC TTCTTTACGGCCGCT Swit_5385 292607 - 293332 + | hypothetical protein Swit_5386 293344 - 293967 + | hypothetical protein TERM 210 294019 - 293970 - T 100 -18.8 -4.07568 | gap 2, overlap 293997 GGTGGCGGCGTAAAA GGAAGCG-TGCGGCGA-CCCAAGT CGAA ACTTGGGTTCGCCGCATCGATCCC TAGGGTGGCGCCGCA Swit_5387 294277 - 294041 - | acyl carrier protein Swit_5388 295836 - 294496 - | metal dependent phosphohydrolase TERM 211 295096 - 295119 + g 71 -3 -4.59773 | opp_overlap 295070 GGGTGAGATGCCCTC GGTCATCAGC AGAA GCTCGTGCCC TTTTTGCGGATGCGC Swit_5389 298189 - 295901 - | PAS/PAC sensor hybrid histidine kinase TERM 212 297796 - 297806 + g 72 -6.8 -4.3534 | CGCGATCGGCCGCAA GCTC AAT GAGC TTTTGCTGGTTGCAG Swit_5390 298756 - 298337 - | thioesterase superfamily protein TERM 213 298393 - 298373 - G 71 -2.4 -4.56775 | overlap 298375 ATCGGCGGTGAAAAA GTGCTGGA TCACC TCCCGCGC CAGGCGGGCGGGACG Swit_5391 300509 - 298815 - | phosphoenolpyruvate carboxykinase TERM 214 299748 - 299738 - G 71 -2.4 -4.6635 | opp_overlap 299727 299745, overlap 299727 AAAGGCCGAAGAAAA CGGC TGT GTCG CCCTCAGGGCCAATG TERM 215 300044 - 300032 - G 82 -3.3 -5.06414 | GGGTCCGAACAAAAA GACTG TGC CAGGC GAGCTCGGTGTAGAC TERM 216 300729 - 300704 - g 78 -16.2 -3.05463 | overlap 300718 AGCGCTGGCATTGAA CTGCTCGGCG AGAACG CGCCGAGCAG CGGGGTGGGACGCGG Swit_5392 300518 - 300841 + | XRE family transcriptional regulator Swit_5393 300856 - 301164 + | PhnA-like protein Swit_5394 301196 - 302833 + | Na+/H+ antiporter Swit_5395 302888 - 303223 + | hypothetical protein Swit_5396 303363 - 303761 + | response regulator receiver protein TERM 217 303786 - 303765 - T 70 -7.9 -4.07568 | gap 1, overlap 303769 TCGGCCGCCTGAAAA GGC-AGCCGC GGA GCGGCAAGCC TCCATCAGGGGCGCC Swit_5397 305307 - 303802 - | 2-octaprenylphenol hydroxylase Swit_5398 308529 - 305440 - | transposase Tn3 family protein TERM 218 307200 - 307210 + g 71 -2.4 -4.58395 | TGAGGTAGCTGATCG CGGC CTT GACG TTTTTGCCACCTGGG TERM 219 307272 - 307284 + g 75 -4.7 -4.65747 | opp_overlap 307267, overlap 307273 CAAAGAACAATCGCC GGGCG CTC CGCCA TTTTGTTCGCAGTTG TERM 220 307878 - 307855 - G 83 -14.6 -3.57144 | gap 1 GTCGCCATCGTCAAA CAGCGCG-GCG ATG CGCACGCGCTG GTCATCGCTCAAGCT TERM 221 309034 - 309016 - g 79 -3 -4.87803 | overlap 309018 309029 GACGCCCAAAGAAAA TGCGCCCA GAT CAGGCGGA GCTCGCTCGCCAACT Swit_5399 308586 - 309146 + | resolvase domain-containing protein Swit_5400 310208 - 309141 - | outer membrane efflux protein TERM 222 309441 - 309386 - G 72 -13.3 -3.14344 | gap 3, opp_overlap 309392 GATTGGCCCGAGCAA GCCGGATGCCGGCGTCGG-CGATGGCCA GAT CGGC-ATCGGCCGCCGCCAGCG-CCAGC GTGCCTTGCGCACTT SEQUENCE gi|148550845|ref|NC_009508.1| Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence (length 222757) Swit_4887 1215 - 10 - | beta-ketoadipyl CoA thiolase Swit_4888 1874 - 1212 - | butyryl-CoA:acetate CoA transferase Swit_4889 2584 - 1874 - | 3-oxoacid CoA-transferase, A subunit TERM 1 2549 - 2536 - G 72 -3.7 -4.61231 | TCATACCGTCAAAAA GCAGG CCTT CCAGC GCTGCGCCGGGATTC Swit_4890 3480 - 2581 - | hydroxyquinol 1,2-dioxygenase Swit_4891 4575 - 3505 - | iron-containing alcohol dehydrogenase Swit_4892 6269 - 4575 - | hypothetical protein TERM 2 5346 - 5314 - G 86 -12 -4.15044 | gap 1, overlap 5317 GCCGGGGTGAACAAA TGAGCCGCGTCGCCC GCAA GGATGACGCGGC-CA GAAACCATCTGCTCG TERM 3 5344 - 5317 - G 74 -14.8 -3.10244 | overlap 5314 GGGGTGAACAAATGA GCCGCGTCGCCC GCAA GGATGACGCGGC CAGAAACCATCTGCT TERM 4 6263 - 6245 - G 78 -6 -4.5774 | overlap 6240 CACCAACAATGAAAA CCTTCTTC TCT GAACAAGG CAGCATCCCGATCCT TERM 5 6368 - 6405 + r 70 -10.6 -3.63968 | overlap 6371 GAACTCTTTTGGGGG TGATCTGCCCCTTCCC GGGGCG GGGGGGGGGCAAATTA TTTGGAGATTTGGCC TERM 6 6371 - 6402 + r 76 -10.1 -3.95071 | overlap 6368 CTCTTTTGGGGGTGA TCTGCCCCTTCCC GGGGCG GGGGGGGGGCAAA TTATTTGGAGATTTG TERM 7 6532 - 6569 + r 95 -10.7 -4.55798 | gap 1, opp_overlap 6528 6541, overlap 6533 6537 TCAATCAAGATTGTT GGACACCAAGAGCCTGAT GCC ATCAAGCTCTTGG-GTCA TTTTGATTTGGCATG TERM 8 6533 - 6568 + r 82 -14.2 -3.32756 | gap 1, opp_overlap 6528 6541, overlap 6532 6537 CAATCAAGATTGTTG GACACCAAGAGCCTGAT GCC ATCAAGCTCTTGG-GTC ATTTTGATTTGGCAT TERM 9 6537 - 6565 + r 74 -14.7 -2.52666 | opp_overlap 6528 6541, overlap 6533 6532 CAAGATTGTTGGACA CCAAGAGCCTGAT GCC ATCAAGCTCTTGG GTCATTTTGATTTGG Swit_4893 6837 - 6517 - | ferredoxin Swit_4894 9391 - 6965 - | TonB-dependent receptor Swit_4895 10385 - 9537 - | alpha/beta hydrolase fold TERM 10 10541 - 10554 + r 74 -2.4 -4.91852 | GGATTTCGATGTGTG GCTT GGCTCA AAGC TTTCTTTTTAGTCAG TERM 11 10613 - 10623 + r 72 -2.6 -4.78107 | opp_overlap 10613 GTTTTTCAAACACAA TATT GGA AATA TTTTTGCTCCTAGTA Swit_4896 11185 - 10646 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_4897 12489 - 11182 - | ring hydroxylating dioxygenase, alpha subunit Swit_4898 12709 - 13521 + | IS4 family transposase Swit_4899 13643 - 14464 + | IS4 family transposase Swit_4900 14785 - 15597 + | IS4 family transposase TERM 12 15823 - 15839 + F 77 -13.7 -3.30243 | opp_overlap 15812 15803 15813 GAAAGCACCCCTTCG GCGCGTG AGG CACGCGC TTGTAAAACCTACAT Swit_4901 16125 - 16928 + | GntR family transcriptional regulator Swit_4902 17011 - 17895 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 13 18023 - 17967 - f 90 -18.1 -3.05596 | opp_overlap 17970 GAGGTTGTGATTTAA GGAGGATTTGGGCTTCGTCGTAGTGAC GAA GGAACGAAGATGAAGCCCAAATCCTCC TTGAAAAAATCGGCG TERM 14 17970 - 18020 + F 75 -14.8 -2.71364 | opp_overlap 17967 GTTGTGATTTAAGGA GGATTTGGGCTTCGTCGTAGTGAC GAA GGAACGAAGATGAAGCCCAAATCC TCCTTGAAAAAATCG TERM 15 18051 - 18033 - g 81 -2.2 -5.00616 | overlap 18034 18035 TCCTCCTTGAAAAAA TCGGCGCC GAA GGCCCCAG CTGAGCGGGTGGTGA Swit_4903 18006 - 18392 + | transposase IS3/IS911 family protein Swit_4904 18389 - 18733 + | hypothetical protein Swit_4905 20171 - 18798 - | IS4 family transposase TERM 16 19548 - 19527 - G 73 -7.1 -4.11216 | opp_overlap 19541, overlap 19528 GCTGTAGGCGTAAAA GGCCGCCTC GCGC GTGGCGGCG GTCCAGCGCGAGGCT TERM 17 20690 - 20678 - g 72 -3.3 -4.61231 | CCAGACCCTGAAAAA CCGCA TCC TGCTG GAAAATTACTTCCTG Swit_4906 20283 - 20900 + | integrase catalytic subunit Swit_4908 22349 - 21498 - | integrase catalytic subunit Swit_4909 22669 - 22391 - | transposase IS3/IS911 family protein TERM 18 22446 - 22474 + g 70 -8.7 -3.88559 | overlap 22451 22452 TCGAGCGTCAGATCC GAGATCGCGCGGC GAA GCCGCACATTCTC TTTCTCCAGGTCCTT Swit_4910 23275 - 22865 - | dehydrogenase TERM 19 23350 - 23383 + H 100 -26.9 -3.71873 | opp_overlap 23350 TGTAGATTGAGATGA TCGCATGGGGTGGGG CATG CCCCACCCCATGCGA TTTCGATCTCGGTGG TERM 20 23383 - 23350 - H 100 -26.9 -2.65815 | opp_overlap 23350 TGTAGATTGAGATGA TCGCATGGGGTGGGG CATG CCCCACCCCATGCGA TTTCGATCTCGGTGG Swit_4911 23463 - 24674 + | transposase, mutator type Swit_4912 24948 - 24703 - | hypothetical protein TERM 21 25258 - 25293 + G 81 -2.5 -5.03314 | overlap 25269 CCGGCGCGTAAATCG GCGTTCGACG-GGCTCG ACGA CTGGCTGCG-CGAGCGC TTTTTTCGGCATGGC Swit_4913 25042 - 26328 + | integrase catalytic subunit Swit_4914 26328 - 27143 + | IstB ATP binding domain-containing protein Swit_4915 27127 - 27570 + | transposase IS3/IS911 family protein Swit_4916 27567 - 27914 + | IS66 Orf2 family protein Swit_4918 31400 - 29331 - | resolvase domain-containing protein TERM 22 31145 - 31115 - G 71 -11.1 -3.62096 | GGCCATTACGGGAAA GGCGCGATGCGTC CAAGC AAAGCACCGCGCC AACCTTGCCCGTGCA TERM 23 31919 - 31905 - g 71 -2.7 -4.56597 | opp_overlap 31895 CTTGGGCCGTAAAAA CTGGC TGTTC GCCGG ATCAAAGGCAGGCGG Swit_4919 31825 - 32115 + | hypothetical protein TERM 24 32197 - 32160 - T 100 -28.7 -4.08767 | CCGACTTCGCGAAAA GCGTAGATCCGGCCTTC TGCA GAAGGCCGGATCTACGC TTGAGACCACCGAAA Swit_4920 33746 - 32517 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Swit_4921 34722 - 33832 - | 3-keto-5-aminohexanoate cleavage enzyme TERM 25 34246 - 34258 + g 72 -6.2 -4.30809 | GAACACTTCCCATTC GGGC TTGAT GCCC TTTTCCTGCATCTTG Swit_4922 35550 - 34834 - | pyruvate, phosphate dikinase Swit_4923 36572 - 35547 - | 4-hydroxy-2-ketovalerate aldolase Swit_4924 37510 - 36569 - | acetaldehyde dehydrogenase Swit_4925 38295 - 37513 - | 4-oxalocrotonate decarboxylase TERM 26 37827 - 37816 - G 89 -3.6 -5.31877 | overlap 37817 37818 AGCCAGCACAAAAAA GGCC GAGG AGCC GTTGTCGGCAACGGT TERM 27 38071 - 38091 + g 72 -8.9 -4.0371 | CAGGACGCCAAAGTC CGGCTGGTC GAC GCCCAGCTG TTTCTGTACAGCCTC Swit_4926 38588 - 39184 + | transcriptional regulator IclR-like protein Swit_4927 39177 - 40097 + | 2-dehydropantoate 2-reductase Swit_4928 40501 - 40130 - | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase-like protein Swit_4929 41422 - 40565 - | IstB ATP binding domain-containing protein Swit_4930 42897 - 41419 - | transposase Tn3 family protein Swit_4931 43527 - 42901 - | resolvase domain-containing protein TERM 28 43535 - 43563 + H 76 -10.3 -3.89346 | overlap 43536 ATCAGCATGTCCGCC CCCTGTGCAGC AACCTAA GCTGAACAGGG TTTATCGGCTACAGG TERM 29 44574 - 44596 + G 77 -11.2 -3.92869 | overlap 44575 CATCTGGAGATTTGC TGGTGGCGCC AGC GGCGCTACCC TTTCTCCCTGCATGA TERM 30 44575 - 44595 + G 72 -14.7 -2.954 | overlap 44574 ATCTGGAGATTTGCT GGTGGCGCC AGC GGCGCTACC CTTTCTCCCTGCATG Swit_4932 43934 - 44611 + | hypothetical protein TERM 31 44986 - 45027 + T 71 -10.7 -3.44051 | gap 1, opp_overlap 44984 CTCTGCGCAGAGAGC GCTTGG-GCCACCTGCCCGG GAT CCGGGCTCAGGGCACCAAGC TTGTCATGCTGGCGG Swit_4934 46470 - 45364 - | relaxase/mobilization nuclease family protein Swit_4935 46999 - 46463 - | CopG/DNA-binding domain-containing protein TERM 32 47156 - 47193 + r 85 -14.2 -3.58905 | opp_overlap 47159, overlap 47159 TGCCCTGCGAAATGA AAATGGCGGCATCCCT GGAAGA AGGGATGCCGCCATCA TTCTATCTGAAAAAT TERM 33 47159 - 47190 + r 93 -20.3 -2.91997 | opp_overlap 47159, overlap 47156 CCTGCGAAATGAAAA TGGCGGCATCCCT GGAAGA AGGGATGCCGCCA TCATTCTATCTGAAA TERM 34 47190 - 47159 - R 100 -20.3 -4.54727 | opp_overlap 47159 47156 CCTGCGAAATGAAAA TGGCGGCATCCCT GGAAGA AGGGATGCCGCCA TCATTCTATCTGAAA Swit_4936 48422 - 47526 - | parB-like partition protein TERM 35 48110 - 48142 + g 75 -5.5 -4.63932 | gap 1, overlap 48114 CAAGGACATCGGCCC CCTCCCCCGC-ATC CACCAC GATCGCGGGGATGG TTTTCTTCCCCGCTG Swit_4937 49252 - 48422 - | cobyrinic acid a,c-diamide synthase Swit_4938 49644 - 49381 - | hypothetical protein Swit_4939 50069 - 49770 - | hypothetical protein TERM 36 50120 - 50088 - R 95 -10.5 -4.57569 | opp_overlap 50080 50092, overlap 50089 50090 CGACTCCTCGAAAAA GCTGTTGGCCCCGAC ATG GTCGGGGCCAATATA TCTCAATATTCGCTC TERM 37 50119 - 50089 - R 77 -14 -3.3422 | opp_overlap 50080 50092, overlap 50088 50090 GACTCCTCGAAAAAG CTGTTGGCCCCGAC ATG GTCGGGGCCAATAT ATCTCAATATTCGCT TERM 38 50118 - 50090 - R 83 -17.5 -2.60211 | opp_overlap 50080 50092, overlap 50089 50088 ACTCCTCGAAAAAGC TGTTGGCCCCGAC ATG GTCGGGGCCAATA TATCTCAATATTCGC TERM 39 50092 - 50116 + r 93 -20.1 -3.02626 | opp_overlap 50090 50089 50088, overlap 50080 TCCTCGAAAAAGCTG TTGGCCCCGAC ATG GTCGGGGCCAA TATATCTCAATATTC Swit_4940 50680 - 50123 - | hypothetical protein TERM 40 50558 - 50544 - G 70 -8.5 -3.85698 | opp_overlap 50544 50542 GTGTTTTTCGACAAA CCCCG CCGAT CGGGG TCTTTCAACAGGGAC Swit_4941 50757 - 51143 + | hypothetical protein Swit_4942 51211 - 51519 + | hypothetical protein Swit_4943 51516 - 52253 + | hypothetical protein Swit_4944 52879 - 52319 - | hypothetical protein TERM 41 52923 - 52899 - H 93 -18.5 -3.28924 | overlap 52900 GATCTCGCGGGAGAA GGGGCGGGGGC GCA GCCCCCGCCCG AGGGTCAGGCGAAAG TERM 42 52922 - 52900 - H 100 -22 -2.57211 | overlap 52899 ATCTCGCGGGAGAAG GGGCGGGGGC GCA GCCCCCGCCC GAGGGTCAGGCGAAA TERM 43 53637 - 53587 - g 73 -7.5 -4.18018 | overlap 53600 GCGCGCCAGGCAAAA TGC-CGGCTCGAAATCGAACGCGGC GAA GCCGCATCCGAACGCGC-CCGCGCA CTTCTCGATGGCAAG TERM 44 53624 - 53600 - g 76 -14.3 -3.53343 | overlap 53587 AATGCCGGCTCGAAA TCGAACGCGGC GAA GCCGCATCCGA ACGCGCCCGCGCACT Swit_4945 53290 - 53802 + | nuclease Swit_4946 54247 - 53816 - | hypothetical protein TERM 45 53916 - 53897 - G 70 -9.2 -3.86015 | overlap 53899 GAGCGCCGCGACAAA GAGCGGGC CTCC GCCCGCTT CGGCGAACAGGGTCA TERM 46 54345 - 54315 - H 76 -7.4 -4.25104 | opp_overlap 54318, overlap 54316 TTGCGGCCAGCAAAA GCCCGGCGGAGG CCGTTAT CCACCGCCGGAG GCAAAGTCGATACGC Swit_4947 54437 - 55168 + | hypothetical protein Swit_4948 55089 - 56648 + | nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein Swit_4951 57509 - 58273 + | hypothetical protein Swit_4952 59375 - 58326 - | hypothetical protein Swit_4953 60550 - 59987 - | hypothetical protein Swit_4954 61586 - 60612 - | parB-like partition protein Swit_4955 62989 - 61838 - | cobyrinic acid a,c-diamide synthase TERM 47 62148 - 62132 - G 74 -15.1 -3.06399 | opp_overlap 62130 62129 TCTAATGAAATTATA GGCGGGG CGC CCCCGCC CCGCGAGCTTCTCAA Swit_4956 63589 - 64893 + | plasmid encoded RepA protein TERM 48 65386 - 65436 + T 100 -23.2 -3.37531 | GGCCATCGTGTTACA TGCCGGGGGTAGTGGCGTGAGGGC GTA GCCCGAGGGCCACTCCCCCCGGCA TTGGTGTAATTTTCA Swit_4957 66216 - 65449 - | IstB ATP binding domain-containing protein Swit_4958 67721 - 66213 - | transposase Swit_4959 68786 - 67824 - | hypothetical protein Swit_4960 68913 - 69188 + | hypothetical protein TERM 49 70830 - 70820 - g 72 -4 -4.64676 | TGAGCTGGAACAAAA TGAA GCG TTCA GGACATTTTGTGGCT Swit_4961 69396 - 70847 + | hypothetical protein TERM 50 70890 - 70853 - f 71 -9.7 -3.72576 | TTGTGGCTGACGAAA CGCTCTTGCGCGCCGGA AAAA TCCGGGGCACTAAGGCG GAAATGAAGCGTTGT Swit_4962 70953 - 71678 + | hypothetical protein Swit_4963 71684 - 72142 + | hypothetical protein Swit_4964 72633 - 73580 + | hypothetical protein TERM 51 73587 - 73610 + F 100 -21 -5.13473 | overlap 73583 GCGGGCTGAAGCCGC GGGCCGCCGG TTTG CCGGCGGCCC TTTTTTGGCTCTGCT TERM 52 74036 - 74058 + G 81 -10.6 -4.2558 | opp_overlap 74036 GCGTTTCGCCGGAAA TGTCGATCCG GTG CTGATCGACA TTTTCATGGAGAATG TERM 53 74094 - 74072 - g 70 -12.6 -3.35996 | overlap 74073 CATTTTCATGGAGAA TGCCACGGGC TTT GCCCGCGGCG CGTCGGCAAGCGTCG TERM 54 74093 - 74073 - g 73 -16.1 -2.61383 | overlap 74072 ATTTTCATGGAGAAT GCCACGGGC TTT GCCCGCGGC GCGTCGGCAAGCGTC Swit_4965 73812 - 74435 + | hypothetical protein Swit_4966 74919 - 75332 + | single-strand binding protein TERM 55 75342 - 75367 + T 100 -17.5 -4.98616 | opp_overlap 75336 75335, overlap 75343 TTCTGAAACCGGCGA AGCCCGGCGGC TCAC GCCGCCGGGCC TTTTTGCTGTTTTCC TERM 56 75343 - 75366 + T 100 -21 -3.57543 | opp_overlap 75336 75335, overlap 75342 TCTGAAACCGGCGAA GCCCGGCGGC TCAC GCCGCCGGGC CTTTTTGCTGTTTTC Swit_4967 76764 - 76285 - | RES Swit_4968 77195 - 76761 - | hypothetical protein Swit_4969 77487 - 77651 + | hypothetical protein TERM 57 77657 - 77680 + T 93 -19.6 -2.87931 | CTTCGCGTGACACTT GCCGGGAGCC CCAG GGCTCCCGGC TCTGTCCAACATCAA Swit_4970 78238 - 77897 - | hypothetical protein Swit_4971 80175 - 78457 - | RNA-directed DNA polymerase Swit_4972 80872 - 81597 + | hypothetical protein Swit_4973 81621 - 82016 + | hypothetical protein TERM 58 82045 - 82025 - f 100 -18.3 -3.68836 | opp_overlap 82022 82021 ATACTGAGCTAACAA GGCCCCGAC CGT GTCGGGGCC ACCATTTTGCGGAAT TERM 59 82204 - 82189 - f 79 -9 -4.16943 | opp_overlap 82150 GGGGATAGCCGAAAA GTCTGC TTGA GCAGAC TGTCGGTGGTGCCGC TERM 60 82267 - 82285 + F 79 -8.1 -4.28994 | gap 1 CGAGAGGGGAGGCTG CGCGG-CG AGAG CGTCCGCG TTTTGCTGCGTGGTG TERM 61 82615 - 82652 + G 77 -15.6 -3.14132 | opp_overlap 82584 82625, overlap 82625 CCTCGCCTGGTATCT GGCCGAGCAAGGCGAC AACCGC GTCGCCTTTCTCGACC TTGATCCGCAGGGCA TERM 62 82625 - 82642 + G 70 -8.4 -3.89881 | opp_overlap 82584 82625, overlap 82615 TATCTGGCCGAGCAA GGCGAC AACCGC GTCGCC TTTCTCGACCTTGAT Swit_4974 82454 - 83302 + | cobyrinic acid a,c-diamide synthase Swit_4975 83302 - 84237 + | parB-like partition protein TERM 63 84311 - 84353 + F 100 -17.7 -4.82901 | opp_overlap 84311, overlap 84315 GAGCTTTTCAGACAA TTTTGACAGCCGCGCCCCT TCTTC AGGGGCGCGGCTGTCTTCA TTTTTCTAGGGCAGA TERM 64 84353 - 84311 - f 95 -17.7 -3.48593 | opp_overlap 84311 84315 GAGCTTTTCAGACAA TTTTGACAGCCGCGCCCCT TCTTC AGGGGCGCGGCTGTCTTCA TTTTTCTAGGGCAGA TERM 65 84315 - 84349 + F 100 -27.3 -3.88001 | opp_overlap 84311, overlap 84311 TTTTCAGACAATTTT GACAGCCGCGCCCCT TCTTC AGGGGCGCGGCTGTC TTCATTTTTCTAGGG Swit_4976 84676 - 85071 + | hypothetical protein TERM 66 85757 - 85712 - g 72 -13.2 -3.14211 | gap 1, opp_overlap 85745, overlap 85743 AGCTTCGCCCATGAA TTGCGTCAGCGCGGCATCGCC GCCGA AGCGACGCCGCGCCG-CGCGC GCGGCCATGTCCAGC Swit_4977 85064 - 86197 + | hypothetical protein Swit_4978 88630 - 86411 - | DEAD/DEAH box helicase domain-containing protein TERM 67 86497 - 86487 - GT 77 -3.2 -4.74103 | opp_overlap 86491 CGGCGAACCCAAAAA TCGC GAT GCAA AGCCTCTGGTATCAA TERM 68 87296 - 87274 - GT 74 -9 -3.89903 | AAAGAGCCGTATAAA GGTCGGATGC ACT GCAGCCGCCC GCCTGAGTGATATAG Swit_4979 89906 - 88602 - | hypothetical protein TERM 69 89280 - 89252 - GR 74 -9 -3.87869 | TCAAGCTGTCATAAA CGTCCGCATC-ATC GAT GATTGA-GCGGACG CCGAGCGCCTGGCGA Swit_4980 93274 - 89903 - | hypothetical protein TERM 70 93481 - 93493 + r 76 -9.1 -4.08394 | TTTCGATCCCCAGCA GCGGA CGT TCCGC TTTTCCGGCGGATGT Swit_4981 94581 - 93853 - | IstB ATP binding domain-containing protein Swit_4982 95839 - 94568 - | integrase catalytic subunit TERM 71 95545 - 95528 - G 70 -8.3 -3.85389 | GCCGAAGAAGGCAAA GCCGCGC GCAT GCGCGTC GAACAGCATCTCCTG Swit_4983 95975 - 97468 + | transposase Swit_4984 97465 - 98232 + | IstB ATP binding domain-containing protein TERM 72 98295 - 98245 - T 100 -23.2 -3.37531 | TGAAAATTACACCAA TGCCGGGGGGAGTGGCCCTCGGGC TAC GCCCTCACGCCACTACCCCCGGCA TGTAACACGATGGCC Swit_4985 98580 - 98284 - | hypothetical protein Swit_4986 98858 - 99760 + | hypothetical protein TERM 73 100639 - 100653 + F 76 -11.4 -3.80573 | opp_overlap 100635 100638 100637 GGGGCCATAAACAGC GAGGGC GCC GCCCTC TTTCATGCTCGTCCG Swit_4988 100861 - 101979 + | glycoside hydrolase family protein Swit_4989 101976 - 102347 + | hypothetical protein Swit_4990 102431 - 103252 + | IS4 family transposase TERM 74 103675 - 103694 + G 72 -4.9 -4.4715 | TTGCCGGGATATTCA GCGATCG CCTGTT CGAACGC TTTTCTCAGTTCGCG Swit_4991 103386 - 104537 + | carbamoyltransferase TERM 75 106798 - 106812 + G 81 -2.1 -5.00884 | gap 1, opp_overlap 106793 106779, overlap 106790 AGGCGAACAACGGGC GCTCGC GCTC GC-AGC TTTTTTGACAGAGGT Swit_4992 104870 - 107515 + | hypothetical protein Swit_4993 108342 - 107623 - | metal dependent phosphohydrolase Swit_4994 109355 - 108444 - | Abi family protein Swit_4995 109520 - 110656 + | metallophosphoesterase Swit_4996 110653 - 113298 + | hypothetical protein Swit_4997 114316 - 113573 - | hypothetical protein TERM 76 114114 - 114102 - G 77 -3.3 -4.68593 | overlap 114103 TTGATCAGCGAAAAA TCGAG ATC CTCGG AGAAGCGGTAGTTCT Swit_4998 115146 - 114316 - | transcriptional regulator-like protein TERM 77 115317 - 115299 - R 100 -13.2 -4.40132 | opp_overlap 115290 ATCAATCACAATAAA TGTTCGGC AAA GCCGAACA AAGATGGCGGTTCTT Swit_4999 116365 - 115400 - | hypothetical protein TERM 78 116083 - 116072 - G 72 -3.6 -4.56597 | overlap 116074 CGCCGTCGTGAAAAA GGCA GGTT CGCC CGACCATTTCGCCTT Swit_5000 118358 - 116346 - | TRAG family protein TERM 79 117946 - 117917 - GR 74 -12.1 -3.4072 | GATTGGGGATCACAA CGCCGACGCCC TTGCCGGC GCGCGTCGGCG CCTCGAGCAAGACAT Swit_5001 119328 - 118324 - | P-type DNA transfer ATPase VirB11 TERM 80 118596 - 118582 - GR 74 -5.6 -4.52589 | overlap 118586 GTTGCGCAGATAAAA GAAGGC GGT GCCGTC GCGCAGCTCCTGCAG Swit_5002 120549 - 119332 - | conjugation TrbI family protein TERM 81 119376 - 119410 + g 72 -5.6 -4.40561 | opp_overlap 119375, overlap 119402 CGGCGAAGTTAAAGT CCTTGGCGACGAAG ATGCCGA CTTCCTCGCCCTGG TTCTTTTTCAGGACC Swit_5003 121412 - 120555 - | P-type conjugative transfer protein VirB9 TERM 82 121100 - 121151 + g 73 -12.2 -3.53091 | gap 1, overlap 121096 AGTTGCGCAGTTCGC CCCCGCGATTGGTCGTGAC-GATGA GGT TGGTCGGTCCCGCCCGCTCGCGGGG TTTCAGGAACAGGAT Swit_5004 122098 - 121409 - | VirB8 family protein Swit_5005 123377 - 122433 - | TrbL/VirB6 plasmid conjugal transfer protein TERM 83 122678 - 122649 - G 70 -8.5 -3.95378 | gap 1, opp_overlap 122654, overlap 122654 GTAGACCGCAAACAA GACAGCGCCGATCG TCA CGTCCGGCG-TGCC TTCGGCCGCAGTCAG Swit_5006 124323 - 123607 - | type IV secretion system family protein Swit_5007 126745 - 124328 - | type IV secretion/conjugal transfer ATPase TERM 84 125275 - 125231 - G 74 -12.2 -3.54424 | overlap 125232 125262 125264 GCGCAGCGGCGCAAA CCCGGTCGGCACCC-CATTGCG CAG CGCAAGATAGGTGCCG-CCGGA TGACCGCACATAGAT TERM 85 126509 - 126527 + g 72 -6.6 -4.26076 | GTCGTCGGCGATATT GCGCAGCG TGC CGTTGAGC TTTTCGTGCCAGTCG TERM 86 126667 - 126680 + g 78 -5.9 -4.59773 | opp_overlap 126664 126663, overlap 126666 126665 AGGGGAGATAACGCG CGGGG TCCG CCTCG TTTTTGAGGATCCGC Swit_5008 127073 - 126738 - | type IV secretory pathway, VirB3 family protein Swit_5009 127425 - 127084 - | VIRB2 type IV secretion fmaily protein Swit_5010 128096 - 127422 - | lytic transglycosylase, catalytic TERM 87 128378 - 128365 - R 72 -4.5 -4.57516 | opp_overlap 128365, overlap 128366 AGAGGCAAATCAAAA CCTGG CAGC CCAGA TCGTTGGCGGACGCA Swit_5012 129567 - 128698 - | regulatory protein, LuxR Swit_5013 129719 - 130285 + | hypothetical protein TERM 88 131913 - 131938 + T 79 -15.5 -2.91912 | gap 1, opp_overlap 131907, overlap 131921 TCTACACCATGGTCA GCGCAGCAGCAG GGT CTGC-GCTGCGC TGTGTCGATGGCTCC Swit_5015 132587 - 132216 - | IS4 family transposase Swit_5016 132973 - 132599 - | hypothetical protein TERM 89 133026 - 132997 - R 70 -13.1 -2.94333 | opp_overlap 132997 132996 132995 133001, overlap 132994 132990 133001 TCCCAAAAGGAAGCA GGAATCACATTCT CCCG AAAATGTGATTCC CTATTGTCCACAGAC Swit_5017 134672 - 133173 - | methylmalonate-semialdehyde dehydrogenase [acylating] Swit_5018 134767 - 135651 + | LysR family transcriptional regulator Swit_5019 136938 - 135736 - | beta-ketoadipyl CoA thiolase Swit_5020 137713 - 136943 - | 3-oxoadipate enol-lactonase Swit_5021 138122 - 137787 - | Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit-like protein Swit_5023 139124 - 138414 - | 3-oxoacid CoA-transferase, A subunit Swit_5024 139704 - 139135 - | dehydrogenase Swit_5025 139722 - 139919 + | hypothetical protein Swit_5026 142451 - 140067 - | TonB-dependent receptor TERM 90 140641 - 140629 - G 86 -6.9 -4.85599 | overlap 140630 TCCAGTCCATAAAAA CGGGC CTT GCCCA CGTTCTGCGTGACGA TERM 91 140854 - 140836 - G 71 -2.2 -4.65263 | overlap 140832 ATGCTCGAAAAGAAA CCGCCCGC CTT GAAGCCGG TCTCCACGGTCGCAT Swit_5027 142570 - 143028 + | N-acyl-L-homoserine lactone synthetase-like protein Swit_5028 143149 - 143706 + | hypothetical protein Swit_5029 143823 - 145175 + | phage integrase family protein Swit_5030 145836 - 145342 - | hypothetical protein TERM 92 145964 - 145999 + G 81 -12.7 -3.90744 | gap 1, opp_overlap 145975 145978 145983 ATGAGTGATCTTTTC TGGCTGACAGACGAGC AGATG GCTCGGCT-TCAGCCA TTCTTTCCCAAGAGC Swit_5031 145949 - 146296 + | hypothetical protein TERM 93 146513 - 146503 - g 79 -4.6 -4.72272 | GCCCTTGAGGAAAAA GGGA TTA CCCC TTGCATCCCAGGCAG TERM 94 146563 - 146544 - g 78 -6.4 -4.58685 | overlap 146556 AAAGTCCCGCAAAAA GCTCGTCA AATA CGACAAGC GCCGATACAAAGGTC Swit_5032 146317 - 146706 + | IS4 family transposase TERM 95 146753 - 146767 + F 76 -8.6 -4.16016 | opp_overlap 146741 TAACAGTACAGATTG TACCGT ATA ACGGTA TTTATTGCCAAATCG TERM 96 146902 - 146922 + G 73 -7.5 -4.11216 | overlap 146896 CGCTGGCGTCTGGCG GAATCGCCG ATC CGTCGGTTC TTTTCGACGTGAGGG Swit_5033 146868 - 147692 + | short-chain dehydrogenase/reductase SDR TERM 97 148406 - 148436 + G 72 -8.8 -4.07687 | CTGGAGGCCCCTGAC GCCGTCAGCGCCGC CAT GCGGAACTGGCTGC TTTTCCCCGAAGCGT Swit_5034 147749 - 148486 + | alpha/beta hydrolase fold Swit_5035 148479 - 149234 + | HpcH/HpaI aldolase TERM 98 150210 - 150243 + G 76 -7.3 -4.36914 | gap 1 GATGCGCGGTGTTCG TGCTGCG-CGGCGGAG ATT CACCGTCGATGCCGCA TTTTGTGAACGCCAA Swit_5036 149246 - 150268 + | cupin 2 domain-containing protein Swit_5037 150809 - 150420 - | IS4 family transposase TERM 99 150563 - 150582 + g 78 -6.4 -4.58685 | overlap 150559 GACCTTTGTATCGGC GCTTGTCG TATT TGACGAGC TTTTTGCGGGACTTT TERM 100 150613 - 150623 + g 79 -4.6 -4.72272 | CTGCCTGGGATGCAA GGGG TAA TCCC TTTTTCCTCAAGGGC Swit_5038 151177 - 150830 - | hypothetical protein TERM 101 151162 - 151127 - G 81 -12.7 -3.90744 | gap 1, opp_overlap 151127 151135 151137 GCTCTTGGGAAAGAA TGGCTGA-AGCCGAGC CATCT GCTCGTCTGTCAGCCA GAAAAGATCACTCAT TERM 102 151770 - 151780 + G 72 -8.2 -4.06419 | overlap 151748 CGACCAGCTATGGCT GGCG GTA CGCC TTCTTTCTGACCGCC Swit_5039 151271 - 152503 + | major facilitator transporter Swit_5040 153292 - 152510 - | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase Swit_5041 154194 - 153304 - | intradiol ring-cleavage dioxygenase Swit_5042 154760 - 154191 - | hypothetical protein TERM 103 154619 - 154591 - G 73 -13.1 -3.45434 | opp_overlap 154591, overlap 154581 AACAATGCACCATAA TCCACCGTCGCGC CGG GCGCGAAAGCGGA TTGCATGAGCGCGCG Swit_5043 156270 - 154753 - | monooxygenase, FAD-binding TERM 104 154916 - 154884 - G 78 -16.9 -3.01924 | overlap 154857 154854 154887 CATCCGGGCGCAACA CCACGGCGCCCGGGG CTC CCCCGAGCGCGGTCG CGAGTGCTCCGTCCG TERM 105 154913 - 154887 - G 78 -17.2 -2.73875 | overlap 154857 154854 154884 CCGGGCGCAACACCA CGGCGCCCGGGG CTC CCCCGAGCGCGG TCGCGAGTGCTCCGT Swit_5044 157564 - 156287 - | major facilitator transporter Swit_5045 159744 - 157564 - | TonB-dependent receptor TERM 106 157924 - 157914 - G 72 -8.2 -4.07568 | overlap 157915 CCTTGGCCTGGAAAA CGCC GCT GGCG TTGCCGCCGCCCGGA Swit_5046 161235 - 159796 - | aldehyde dehydrogenase Swit_5047 162868 - 161267 - | benzoylformate decarboxylase TERM 107 162204 - 162233 + g 82 -5.7 -4.68593 | gap 1, opp_overlap 162150 162213 CATGCGCCGTCACGC GCCACACCACCGTT CAC AACGATCGTG-GGC TTTTTGGCTGCTGCC TERM 108 163880 - 163923 + G 71 -2.4 -4.56597 | gap 1, overlap 163855 GCCGGATGCGGGCGG GCTTGGCTGACACGATGTCGA GCT TCGAAGTGATGT-GGCCGAGC TTTTTCGAAGCGGCG Swit_5048 163153 - 164565 + | FAD linked oxidase domain-containing protein Swit_5049 164579 - 165400 + | methyltransferase type 11 Swit_5050 166229 - 165417 - | IS4 family transposase Swit_5051 166360 - 167280 + | LysR family transcriptional regulator TERM 109 167357 - 167391 + T 86 -15.7 -3.65351 | opp_overlap 167319, overlap 167358 TCAGCGACCGGCTGA TCGGAACGGGGGCGC ACGAA GCGCCTCCGTTCGGG TTTACATGCGGATGC TERM 110 167358 - 167390 + T 84 -17 -2.78996 | opp_overlap 167319, overlap 167357 CAGCGACCGGCTGAT CGGAACGGGGGCGC ACGAA GCGCCTCCGTTCGG GTTTACATGCGGATG Swit_5052 168100 - 167393 - | hypothetical protein TERM 111 168077 - 168047 - G 75 -5.2 -4.62783 | overlap 168049 CATGTAGTGGAAAAA CTCCGGGCGGCTCA GCG TGGGCCGGCGGCAG GATGCAATCATCGCC Swit_5053 169810 - 168125 - | X-Pro dipeptidyl-peptidase domain-containing protein TERM 112 169028 - 169046 + g 78 -5.9 -4.66833 | overlap 169030 CAGGGCGGGAACCTG CACCGAC TTGAT GTCGGGG TTTTTGAACTTCCAG Swit_5054 170780 - 169839 - | hypothetical protein TERM 113 170209 - 170196 - G 79 -2.3 -4.87291 | overlap 170197 CATCTGAACGAAAAA CGGCG GCTT CACCA ATCCCCGATCCAGAA Swit_5055 171714 - 170815 - | 3-hydroxyacyl-CoA dehydrogenase Swit_5056 172517 - 171717 - | short-chain dehydrogenase/reductase SDR TERM 114 171806 - 171794 - G 71 -2.6 -4.58773 | overlap 171795 TGGAGCAAAGGAAAA GCAG CGGCC CCGC AAGGTCCTCCGGCTC Swit_5057 172909 - 172514 - | cupin 2 domain-containing protein Swit_5058 173821 - 172949 - | cyclase family protein Swit_5059 173942 - 174706 + | transcriptional regulator IclR-like protein Swit_5060 175152 - 174703 - | MarR family transcriptional regulator Swit_5061 175241 - 176929 + | hypothetical protein TERM 115 177566 - 177590 + G 74 -10.7 -3.77832 | gap 1, overlap 177551 ACCCGCGCGACGCAG CCGCGC-GCG ATCTTG CGCTGCGCGG TTCTTGGCTTTGCGG Swit_5062 176926 - 177984 + | iron-containing alcohol dehydrogenase Swit_5063 178045 - 178974 + | hydroxyquinol 1,2-dioxygenase TERM 116 179663 - 179639 - g 70 -4.2 -4.46615 | CACCATCAACGAAAA GCGGATCG AGCAGTTGA CGGTCCGC GAAAGGGAAACGGTA Swit_5064 179040 - 179681 + | 3-oxoacid CoA-transferase, A subunit Swit_5065 179681 - 180079 + | coenzyme A transferase Swit_5066 181031 - 180090 - | resolvase domain-containing protein TERM 117 180512 - 180525 + g 86 -6.7 -5.06816 | TCCGGCGTCGGATTT CATCG TCAT CGATG TTTTTCTTCCGGCCT Swit_5067 184008 - 181099 - | transposase Tn3 family protein TERM 118 181548 - 181562 + g 90 -7 -4.99035 | opp_overlap 181534 ACCGGCGCAGGATCG CCTCCG GGT CGGCGG TTTTTGTCTGCATCG TERM 119 183634 - 183621 - G 72 -6.7 -4.371 | GGCACCACAGGAAAA CATGC TCGA GCATG GCATTGATCGGCTGC TERM 120 183978 - 183959 - G 71 -2.8 -4.58395 | gap 1, overlap 183960 183963 GCGATGTCCGAAAAA CTCAGGCTC CAG GAGCC-GAT CAGATCCCCACTCGA Swit_5068 184501 - 184779 + | transposase IS3/IS911 family protein Swit_5069 184853 - 185173 + | hypothetical protein Swit_5070 186111 - 185248 - | IstB ATP binding domain-containing protein TERM 121 185286 - 185300 + g 75 -5.7 -4.43501 | overlap 185295 ATTCTTCGCTCTGAT TGTCG CTGAT CGACA TTTTCTCGATGGATT Swit_5071 187610 - 186108 - | integrase catalytic subunit TERM 122 187501 - 187475 - G 70 -13.1 -3.34013 | gap 1, overlap 187478 TACGGTGTGAAGGAA GC-ACCGGATCG CTCG CGATCCGGTAGC CCGTCGCGGTGCTGA Swit_5073 188531 - 188052 - | hypothetical protein TERM 123 188573 - 188555 - H 81 -2.4 -5.1675 | TCATGTACCAAAAAA GTAATCAC CCA GCAATCAC CGAACCGGAAGTGGG Swit_5074 188797 - 189144 + | hypothetical protein TERM 124 191257 - 191244 - g 73 -8.1 -4.18494 | opp_overlap 191233 TATCCGGATCGAAAA CGACC GCTT GGTCG TCCCAAAACTCAAGG Swit_5075 189646 - 192564 + | transposase Tn3 family protein TERM 125 192582 - 192569 - f 77 -3.8 -4.88228 | overlap 192570 192571 ATGTAATATGAAAAA CCTC CCCAGT GAGG AATATCAATCACTTA Swit_5076 192654 - 193418 + | TnpA family transposase TERM 126 193436 - 193423 - Tf 77 -3.8 -4.88228 | overlap 193424 193425 ATGTAATATGAAAAA CCTC CCCAGT GAGG AATATCAATCACTTA TERM 127 194226 - 194214 - gT 72 -3.3 -4.61231 | CCAGACCCTGAAAAA CCGCA TCC TGCTG GAAAATTACTTCCTG Swit_5078 195220 - 194381 - | transposase IS66 Swit_5077 193636 - 194436 + | integrase catalytic subunit Swit_5079 195623 - 195282 - | IS66 Orf2 family protein Swit_5080 196009 - 195620 - | transposase IS3/IS911 family protein Swit_5081 196138 - 196509 + | hypothetical protein TERM 128 196538 - 196571 + F 100 -8.9 -5.28176 | CGATTGTATCATCCA GAAGGGTGTCTGG ACTCACCG CCGGATGCCCTTC TTTTTTGTCGATCGG TERM 129 196863 - 196830 - f 81 -2.2 -5.11937 | gap 1, opp_overlap 196856, overlap 196788 196831 196832 AAGAAGGCGAAAAAA TCGGCTCCCCCACCC CCGCT GCGCGGCGG-GCCGC GGGCGGCCCGTTCCT TERM 130 196856 - 196873 + F 76 -14.1 -3.14564 | opp_overlap 196831 196830 196832 ACCCCCGCTGCGCGG CGGGCCG CGGG CGGCCCG TTCCTGACCCGGTCC Swit_5083 196942 - 197253 + | hypothetical protein TERM 131 197269 - 197307 + T 93 -7.9 -5.1287 | opp_overlap 197271 197291, overlap 197270 197271 AATGATCATCGACCA CAGCGCCGGAGGGCACC GACAA GGGGCTCTCCGGCCCCC TTTTTTGCGTGTCCA TERM 132 197270 - 197306 + T 73 -11.4 -3.66999 | opp_overlap 197271 197291, overlap 197269 197271 ATGATCATCGACCAC AGCGCCGGAGGGCACC GACAA GGGGCTCTCCGGCCCC CTTTTTTGCGTGTCC TERM 133 197271 - 197305 + T 75 -14.9 -2.79476 | opp_overlap 197271 197291, overlap 197270 197269 TGATCATCGACCACA GCGCCGGAGGGCACC GACAA GGGGCTCTCCGGCCC CCTTTTTTGCGTGTC TERM 134 197359 - 197329 - T 100 -21.9 -4.41348 | overlap 197348 GCGTGTCCAAATAAA GCGCAGCCGGGGC ATCTA ACCCCGGCTGCGC TGGCCTCTGCCGAGG TERM 135 197359 - 197378 + T 73 -11.4 -3.66178 | opp_overlap 197348 CTAACCCCGGCTGCG CTGGCCTC TGCC GAGGCCGG TTTCAGCTTGCCCGA Swit_5084 197698 - 197381 - | hypothetical protein Swit_5085 198442 - 197780 - | maleylacetoacetate isomerase TERM 136 198421 - 198389 - G 72 -13.5 -3.12351 | opp_overlap 198373, overlap 198394 TTTCTTCAGATTGAA GGCAATTCTGCAACG CCA CGCTGCAGAACTGCG CCAATAGCCATAATA Swit_5086 199074 - 198442 - | fumarylacetoacetate (FAA) hydrolase TERM 137 199068 - 199055 - G 77 -3.8 -4.74103 | CGCCCAACGCAAAAA TCCG GCCGAT CGGA AAGCAATCGGGTTCC Swit_5088 200042 - 199722 - | ferredoxin Swit_5089 200923 - 200066 - | fumarylacetoacetate (FAA) hydrolase TERM 138 202345 - 202289 - H 90 -18.1 -3.05596 | opp_overlap 202292 GAGGTTGTGATTTAA GGAGGATTTGGGCTTCGTCGTAGTGAC GAA GGAACGAAGATGAAGCCCAAATCCTCC TTGAAAAAATCGGCG TERM 139 202292 - 202342 + H 75 -14.8 -2.71364 | opp_overlap 202289 GTTGTGATTTAAGGA GGATTTGGGCTTCGTCGTAGTGAC GAA GGAACGAAGATGAAGCCCAAATCC TCCTTGAAAAAATCG TERM 140 202373 - 202355 - g 81 -2.2 -5.00616 | overlap 202356 202357 TCCTCCTTGAAAAAA TCGGCGCC GAA GGCCCCAG CTGAGCGGGTGGTGA Swit_5091 202328 - 202522 + | hypothetical protein Swit_5092 205465 - 202514 - | transposase Tn3 family protein TERM 141 202795 - 202785 - G 72 -8.2 -4.08216 | CCACGGTCGCGAAAA CGGC CGA GCCG ATGGAAGGCGACTGC Swit_5093 205594 - 206199 + | resolvase domain-containing protein Swit_5094 206196 - 207560 + | hypothetical protein Swit_5095 207675 - 207848 + | hypothetical protein Swit_5096 207845 - 208315 + | hypothetical protein Swit_5097 209207 - 208347 - | integrase catalytic subunit Swit_5098 209458 - 209240 - | transposase IS3/IS911 family protein Swit_5099 209649 - 210323 + | IS4 family transposase TERM 142 210829 - 210879 + T 93 -16.9 -3.45849 | overlap 210832 CGACGGCGCCGTTGC ATGCTGTTCACCGCAGGCCGCGT CTCTC GCGTGGTCTGCGGTGAACGGTGG TTGTCCTGCTATGCG TERM 143 210832 - 210876 + T 100 -23 -2.8751 | overlap 210829 CGGCGCCGTTGCATG CTGTTCACCGCAGGCCGCGT CTCTC GCGTGGTCTGCGGTGAACGG TGGTTGTCCTGCTAT Swit_5101 212058 - 210913 - | monooxygenase, FAD-binding Swit_5102 213043 - 212192 - | gentisate 1,2-dioxygenase TERM 144 212465 - 212453 - G 72 -9.1 -4.10161 | opp_overlap 212453 212454 CATGATGGCGGAAAA GCCGA GGA TCGGC AGGCAGGGCTGGCCG Swit_5104 215280 - 214552 - | IstB ATP binding domain-containing protein Swit_5105 216139 - 215267 - | hypothetical protein Swit_5106 216288 - 217583 + | integrase catalytic subunit Swit_5107 217580 - 218437 + | IstB ATP binding domain-containing protein Swit_5108 218632 - 218438 - | hypothetical protein Swit_5109 218704 - 219780 + | IS4 family transposase Swit_5110 220430 - 219831 - | hypothetical protein Swit_5112 222527 - 221304 - | transposase, mutator type SEQUENCE gi|148552929|ref|NC_009511.1| Sphingomonas wittichii RW1, complete genome (length 5382261) Swit_0001 245 - 1678 + | chromosomal replication initiator protein DnaA Swit_0002 1789 - 2307 + | NifU-like involved in Fe-S cluster formation TERM 1 2496 - 2480 - g 72 -13.7 -3.17723 | opp_overlap 2464 2462 CGACGCCGAATCGAA GCTCGGC ATC GCCGAGC TCGGCATCGTCCTGC Swit_0003 2304 - 4091 + | sodium/hydrogen exchanger Swit_0004 4078 - 4431 + | hypothetical protein Swit_0005 6153 - 4444 - | band 7 protein Swit_0006 6767 - 6150 - | hypothetical protein Swit_0007 7949 - 6840 - | 3-dehydroquinate synthase Swit_0008 8509 - 7946 - | shikimate kinase Swit_0009 8622 - 8759 + | hypothetical protein TERM 2 8892 - 8949 + G 79 -19.1 -2.52464 | gap 3 GCAGCCGGCCGCCCC CGCGCC-GGCCCAGCC-G-GCCGCCGGC CCGAC GCAGGCGGCACCGGCCGCGCCCGGCGCG TCGGTTGCGCCCACG Swit_0010 8740 - 10554 + | hypothetical protein TERM 3 11158 - 11203 + G 77 -15.3 -3.23216 | gap 1, overlap 11149 GGGGCTGCGCGCGAC CGAGCTGGTCTCGCTGCCGCGC CAC GCGCTGCGGGGCGACCGGC-CG TTCCTGATCCTGCGC Swit_0011 10709 - 11614 + | phage integrase family protein TERM 4 12140 - 12158 + G 73 -13.1 -3.494 | opp_overlap 12137 TGTCGCCGAACATGC GCCGCGC AACCG GCGCGGC TTCTATACCAGCTTC TERM 5 12608 - 12647 + G 80 -17.8 -2.94416 | overlap 12641 CCTGTTCGGCTGGCT GTCGGACCGGATCGGCCG CCGC CGGCTGATCCTGACCGGC TATGTGCTGACGCTG TERM 6 13183 - 13201 + G 79 -11.7 -3.96892 | overlap 13174 ATATCGTCGCCCGCA CCGGCGA TCCCT TCGCCGG TTTCTGGTACACGTT Swit_0012 11706 - 13289 + | major facilitator transporter Swit_0013 13318 - 14364 + | alanine racemase TERM 7 15056 - 15106 + G 72 -13.7 -3.23692 | overlap 15046 GGCTTCCGCGCGCAG GGCGGCGCCGCCGGCGTCGGCCG CGCCA CCACCGACGCGGTCGTCTCCGCC TTCATCCTGATCCTG Swit_0014 14366 - 15160 + | hypothetical protein TERM 8 15637 - 15609 - g 74 -13.9 -3.35679 | gap 1 GGGCGGCATGCAGAA GCGCG-TCGCGC TCGCCC GCGCGATCGCGC CCCGGCCGGAGATCA Swit_0015 15160 - 15918 + | ABC transporter related Swit_0016 16023 - 16577 + | redoxin domain-containing protein Swit_0017 17213 - 16635 - | glutathione S-transferase domain-containing protein Swit_0018 17449 - 18300 + | metallophosphoesterase Swit_0019 18302 - 19330 + | glycosyl transferase, group 1 TERM 9 19428 - 19452 + F 100 -14.9 -5.07652 | overlap 19429 TCATCCCCCACGCTT CGGCCGCTCCG TGA CGGGGCGGCCC TTTTATTTTGGAGGA TERM 10 19429 - 19451 + F 100 -18.4 -3.63868 | overlap 19428 CATCCCCCACGCTTC GGCCGCTCCG TGA CGGGGCGGCC CTTTTATTTTGGAGG Swit_0020 19473 - 20150 + | hypothetical protein Swit_0021 20286 - 20603 + | exodeoxyribonuclease VII, small subunit Swit_0022 20611 - 21504 + | farnesyl-diphosphate synthase Swit_0023 21529 - 22026 + | pantetheine-phosphate adenylyltransferase Swit_0024 22115 - 23023 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type Swit_0025 23033 - 24067 + | queuosine biosynthesis protein Swit_0026 25175 - 24171 - | hypothetical protein Swit_0027 25334 - 27262 + | peptidase S9 prolyl oligopeptidase TERM 11 27305 - 27260 - T 100 -22.7 -3.72576 | gap 1, opp_overlap 27264, overlap 27262 27263 27299 27300 CCGGCGGCGACGAAA TAGGGCGTTTCGGGGCGGA-CG CTT CGATCCGCCCCGAAACGCCTTG GGCTCAAGCCTCGTC TERM 12 27303 - 27262 - T 100 -25.3 -3.44848 | gap 1, opp_overlap 27264, overlap 27260 27263 27299 27300 GGCGGCGACGAAATA GGGCGTTTCGGGGCGGA-CG CTT CGATCCGCCCCGAAACGCCT TGGGCTCAAGCCTCG TERM 13 27302 - 27263 - T 100 -28.8 -2.66695 | gap 1, opp_overlap 27264, overlap 27262 27260 27299 27300 GCGGCGACGAAATAG GGCGTTTCGGGGCGGA-CG CTT CGATCCGCCCCGAAACGCC TTGGGCTCAAGCCTC Swit_0028 28004 - 27309 - | aquaporin Z TERM 14 28100 - 28112 + r 71 -4.8 -4.44046 | opp_overlap 28094 GATCGACAAGTGAGG CCTC TCCCT GAGG TTTATTTCCGCTCCG Swit_0029 29760 - 28114 - | peptidase M28 Swit_0030 29952 - 30374 + | nucleoside diphosphate kinase TERM 15 30525 - 30570 + T 100 -11.4 -5.45802 | gap 3, opp_overlap 30512, overlap 30526 AAGGCGCAGGTTTCG CCTAGAGCGGTTCACGATCCGAT CGC ATCGGATCG-G--CCGCTCTAGA TTTTTGTTTTACCGC TERM 16 30526 - 30569 + T 89 -14.9 -3.86397 | gap 3, overlap 30525 AGGCGCAGGTTTCGC CTAGAGCGGTTCACGATCCGAT CGC ATCGGATCG-G--CCGCTCTAG ATTTTTGTTTTACCG Swit_0031 31009 - 30629 - | hypothetical protein Swit_0032 31635 - 31009 - | hypothetical protein TERM 17 31225 - 31270 + g 83 -14.6 -3.61715 | gap 2, overlap 31226 CGCCACCGGCAGGCG CGCGTCGCCGCGCGGCCGTTCG GGCT CGC-CGGCCTCGCGGCG-CGCC TTCTTGAGGCCGCTC TERM 18 31226 - 31269 + g 78 -18.1 -2.76815 | gap 2, overlap 31225 GCCACCGGCAGGCGC GCGTCGCCGCGCGGCCGTTCG GGCT CGC-CGGCCTCGCGGCG-CGC CTTCTTGAGGCCGCT Swit_0033 32206 - 31628 - | phosphoribosylglycinamide formyltransferase Swit_0034 33347 - 32247 - | phosphoribosylaminoimidazole synthetase TERM 19 33233 - 33201 - G 83 -14.7 -3.63515 | CTTCAGGTCGAAGAA GCCGCCGAAGCCGCC CAG GTCGGCATCGGCGCC CGGCCGACGCGTCGC Swit_0035 33408 - 34622 + | hypothetical protein Swit_0036 34619 - 35242 + | ATPase involved in DNA replication initiation Swit_0037 35252 - 37417 + | polyphosphate kinase Swit_0038 38015 - 37404 - | phosphoesterase, PA-phosphatase related Swit_0039 38110 - 39609 + | Ppx/GppA phosphatase TERM 20 39677 - 39704 + F 93 -7.6 -5.00616 | opp_overlap 39671, overlap 39678 GTCGCAAGAGCCCGC TGAGATGCCGGC CTCC GCCGGCATGACG TTTTTTGAACAAGAG Swit_0040 39831 - 41738 + | acyltransferase 3 Swit_0041 41890 - 42510 + | hypothetical protein Swit_0042 43700 - 42513 - | ribonuclease D aspS 43785 - 45566 + | aspartyl-tRNA synthetase Swit_0044 45783 - 46568 + | hypothetical protein TERM 21 46660 - 46645 - f 76 -6 -4.56597 | overlap 46647 GTCGCGGCCGAAAAA CGGGCC GTGC GGCCGG AGCGTCGCGTGCCGC Swit_0045 46707 - 46979 + | histone family protein DNA-binding protein TERM 22 47083 - 47098 + T 74 -5.4 -4.59773 | gap 1, overlap 47060 47085 CGCTTTCGGCGACGG CG-TCCG GTC CGGATCG TTTTTGGGGCTGGAC TERM 23 47283 - 47308 + T 84 -16.1 -3.06915 | ATATCGATAGCTTGT CGCCGGTCGCC TTGA GGCGACCGTCG TTCAGTGGCGTCCCT Swit_0046 47702 - 47310 - | hypothetical protein Swit_0047 47925 - 47725 - | YcfA family protein Swit_0048 48782 - 47976 - | aminoglycoside phosphotransferase Swit_0049 48911 - 49090 + | hypothetical protein TERM 24 49120 - 49105 - T 84 -8.2 -4.51378 | opp_overlap 49105, overlap 49100 49116 49117 ACGGACAGGAGAAAA GGGGGC CGAA ACCCCC TTTCCGGGGATCAGC Swit_0050 49778 - 49131 - | alpha/beta fold family hydrolase-like protein Swit_0051 49891 - 50949 + | cysteine desulfurase TERM 25 51401 - 51431 + G 74 -13.9 -3.25823 | overlap 51404 GCCGGTCGAGGCGCT CGCCGCGCTCGCC CATCA GGCGGGCGCGCTG TTCCTGTGCGACGCG TERM 26 51404 - 51428 + G 73 -16.4 -2.51547 | overlap 51401 GGTCGAGGCGCTCGC CGCGCTCGCC CATCA GGCGGGCGCG CTGTTCCTGTGCGAC Swit_0052 50946 - 52040 + | aminotransferase, class V Swit_0053 52037 - 52372 + | ferredoxin Swit_0054 52456 - 53235 + | hypothetical protein Swit_0055 53421 - 55169 + | DNA polymerase III, subunits gamma and tau Swit_0056 55166 - 55504 + | hypothetical protein TERM 27 55495 - 55532 + T 76 -10 -3.92542 | gap 2 CGGCTTCAAGATGCC GTTCA-GCTGACGCC-CG CTTG CGAGGCGTCATCCTGAAC TTGTTTCAGGATCCA Swit_0057 56374 - 55679 - | monofunctional biosynthetic peptidoglycan transglycosylase Swit_0058 57884 - 56388 - | hypothetical protein TERM 28 58664 - 58716 + G 74 -14.9 -2.99649 | gap 1, overlap 58691 58694 GCGCGACGACCTCCA GTTCGACATCGGCGCCAATGGCGG GCTCGA CCGCCATGCGC-CCGACGTCGAGC TCTATGTCGGCGTGT TERM 29 58694 - 58739 + G 75 -6.8 -4.4874 | gap 2, overlap 58664 58691 CAATGGCGGGCTCGA CCGCCATG-CGC-CCGACGTCG AGCT CTATGTCGGCGTGTCGCGGCGG TTTTGAGTTTTTCCC Swit_0059 57948 - 58745 + | hypothetical protein Swit_0060 59785 - 58880 - | RNA polymerase factor sigma-32 TERM 30 59232 - 59206 - G 74 -12.2 -3.64703 | opp_overlap 59221 59223 CCTCGTTCATCGAAA CGTTGAGCGACG CGT CGCCGCCCATCG ACATGCGGCGGTTCA Swit_0061 60846 - 59881 - | ribosomal large subunit pseudouridine synthase D Swit_0062 60864 - 61289 + | Mov34/MPN/PAD-1 family protein Swit_0063 61351 - 61977 + | hypothetical protein Swit_0064 61990 - 62538 + | hypothetical protein Swit_0065 62610 - 65048 + | CheA signal transduction histidine kinase Swit_0066 65051 - 65482 + | CheW protein Swit_0067 65601 - 65969 + | response regulator receiver protein TERM 31 66931 - 66968 + G 79 -11.9 -4.08064 | gap 1, overlap 66932 GGGCCGCGACGGCAC GATCGGCG-CCGAGGCGA TGG TCGCCGCGGGCGCCGAGA TTTTGGCGCAGGATT TERM 32 66932 - 66967 + G 74 -15.4 -3.04517 | gap 1, overlap 66931 GGCCGCGACGGCACG ATCGGCG-CCGAGGCGA TGG TCGCCGCGGGCGCCGAG ATTTTGGCGCAGGAT Swit_0068 66005 - 67111 + | response regulator receiver modulated CheB methylesterase Swit_0069 67102 - 67944 + | MCP methyltransferase, CheR-type TERM 33 68031 - 68045 + F 73 -11.4 -3.57119 | GCTTTGCGCTTCCGC CCCGGA TGA TCCGGG TTTAAAGCATGTCTG Swit_0070 68054 - 68779 + | N-acetylmuramoyl-L-alanine amidase TERM 34 68926 - 68906 - f 78 -10.3 -4.04474 | opp_overlap 68913 ACAGTGCCACAGAAA GCAGACCGC CCG GCGGACCGC CAAGCTCGCTTGGTA Swit_0071 69284 - 69814 + | hypothetical protein Swit_0072 69781 - 70128 + | hypothetical protein Swit_0073 70599 - 70165 - | response regulator receiver protein Swit_0074 70997 - 71530 + | peptide methionine sulfoxide reductase TERM 35 71557 - 71531 - T 71 -10.8 -3.53444 | overlap 71527 71532 CGGTTGAAGAAGTAA TTCCTCCCCAGT GCA ACTGGGGAGGGG GACCGCCGCAGGCGG TERM 36 71556 - 71532 - T 75 -14.3 -2.71745 | overlap 71531 71527 GGTTGAAGAAGTAAT TCCTCCCCAGT GCA ACTGGGGAGGG GGACCGCCGCAGGCG Swit_0075 72610 - 71669 - | translation factor SUA5 TERM 37 72372 - 72348 - G 70 -9.3 -3.85698 | gap 1 GGCCCCGGCCAGAAA CGCTCG-GCG AGCCGG CGCGCGAGCG GCGGGAGGATCGCGA TERM 38 72775 - 72755 - R 83 -9 -4.3534 | gap 1, overlap 72757 CCGGAATGACGAAAA GT-GGGGGC GTCA GCCCCCGAC GCGCTCGAGCAGGTC Swit_0076 73111 - 72764 - | GntR family transcriptional regulator Swit_0077 73744 - 73154 - | nitroreductase Swit_0078 73968 - 75779 + | amino acid/peptide transporter Swit_0079 75766 - 77181 + | amidohydrolase Swit_0080 77178 - 78464 + | amidohydrolase 3 TERM 39 78476 - 78508 + F 82 -5.7 -4.87133 | gap 3, overlap 78471 78483 CTGATTAGGGGAGAG GGGACGTCATCCCGGC GAAA GCCGGGAT--C-TCCC TTTTCTTTCCCCGAT Swit_0081 78671 - 80008 + | phosphoglucosamine mutase Swit_0082 80133 - 80936 + | phosphomethylpyrimidine kinase TERM 40 81073 - 81102 + T 90 -13.5 -3.9712 | opp_overlap 81075, overlap 81075 ATGGCGGACAAAGAA AAGGCCGCCCGGA TCGC TCCGGACGGCCTC TTTCTCGTACGATGA TERM 41 81075 - 81100 + T 91 -16.1 -3.57674 | opp_overlap 81075, overlap 81073 GGCGGACAAAGAAAA GGCCGCCCGGA TCGC TCCGGACGGCC TCTTTCTCGTACGAT TERM 42 81100 - 81075 - T 100 -18.3 -4.99043 | opp_overlap 81075 81073 GGCGGACAAAGAAAA GGCCGCCCGGA TCGC TCCGGACGGCC TCTTTCTCGTACGAT rplI 81734 - 81126 - | 50S ribosomal protein L9 rpsR 81977 - 81753 - | 30S ribosomal protein S18 TERM 43 82535 - 82498 - H 100 -13.4 -4.56597 | gap 1, overlap 82501 82518 GCTGTCTTCCAAAAA CAAGCAGGGGCGGAGAG ACAGG CTC-CCGCCCCGGCTGG CGCGGCCTATGACCG TERM 44 82532 - 82501 - H 100 -13.7 -4.40561 | gap 1, overlap 82498 82518 GTCTTCCAAAAACAA GCAGGGGCGGAGAG ACAGG CTC-CCGCCCCGGC TGGCGCGGCCTATGA Swit_0086 82646 - 83581 + | [Acyl-carrier-protein] S-malonyltransferase TERM 45 84320 - 84352 + G 75 -16.9 -2.87132 | overlap 84322 CCCGCCGGCAAGCTG GGCGAGGGCGGCGAC ATC GCCGCCGCCGTCGTC TATCTGGCCAGCCAG TERM 46 84322 - 84350 + G 78 -15.9 -2.98823 | overlap 84320 CGCCGGCAAGCTGGG CGAGGGCGGCGAC ATC GCCGCCGCCGTCG TCTATCTGGCCAGCC Swit_0087 83687 - 84427 + | 3-oxoacyl-[acyl-carrier-protein] reductase Swit_0088 84535 - 84771 + | acyl carrier protein TERM 47 84831 - 84871 + F 100 -17.6 -4.19238 | gap 2 GCCGAGGCTTTTCAG CGGCTCCCCGACCC--CGGG CAA TCCGATGGGACGGGGAGCCG TTTTGCCGTTCAAGA Swit_0089 84906 - 86171 + | 3-oxoacyl-[acyl-carrier-protein] synthase II Swit_0090 86195 - 87166 + | aminodeoxychorismate lyase TERM 48 87240 - 87222 - T 89 -14.6 -3.85698 | opp_overlap 87225 GGCGCTCGGGATAAA CTTCGGCC TCT GGCCGAAG GCTGGGGTCCATGTC Swit_0091 87791 - 87345 - | hypothetical protein Swit_0092 88284 - 87868 - | hypothetical protein Swit_0093 88882 - 88304 - | AsnC family transcriptional regulator Swit_0094 88912 - 89811 + | hypothetical protein Swit_0095 90760 - 89819 - | N-acetyl-gamma-glutamyl-phosphate reductase Swit_0096 91695 - 90757 - | NLP/P60 protein TERM 49 91641 - 91618 - GR 86 -16.7 -3.12351 | TCCGTCGAGATGGAA GGCGGCGGC GGGCCG GCCGCCGCC GGTGAAGCTGTCAGC Swit_0097 91981 - 91652 - | MarR family transcriptional regulator TERM 50 92043 - 92004 - R 74 -14.2 -2.62184 | opp_overlap 92035 GCCCTTCGCATAGGA TCCTGTCGAGGGGCGGGT GCAG ACCCACTCCTCGGCCGGA CAACGCGGGCCGCCC Swit_0098 93518 - 92121 - | leucyl aminopeptidase Swit_0099 93907 - 93521 - | thioesterase superfamily protein Swit_0100 94395 - 93907 - | thioesterase superfamily protein Swit_0101 96474 - 94528 - | K+ potassium transporter TERM 51 96606 - 96644 + H 100 -20.4 -3.76232 | gap 1, opp_overlap 96592 96593 AGGCGGGTTCGAACT GCCTCGGCGGCA-CGTC CGAATC GACGTTGCCGCCGGGGC TTCTCTGTTTCCCGC Swit_0102 96679 - 97455 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Swit_0103 97623 - 98303 + | hypothetical protein TERM 52 98337 - 98384 + F 70 -9.9 -3.53811 | gap 2, overlap 98340 98343 CGCCCCAGGGCGGCT CG-AGC-GCCCCGTCCGTCCC AACTCCGG GGGACGGGCGGGGTTGCTTCC TTTCGCGGGCGTCCC TERM 53 98340 - 98380 + F 89 -16.2 -3.51232 | gap 1, overlap 98337 98343 CCCAGGGCGGCTCGA GC-GCCCCGTCCGTCCC AACTCCGG GGGACGGGCGGGGTTGC TTCCTTTCGCGGGCG TERM 54 98343 - 98376 + F 95 -18.9 -3.5013 | overlap 98340 98337 AGGGCGGCTCGAGCG CCCCGTCCGTCCC AACTCCGG GGGACGGGCGGGG TTGCTTCCTTTCGCG TERM 55 99265 - 99310 + G 71 -9.9 -3.78775 | gap 3, opp_overlap 99288 ACTGCTCGGCGATCC TCGAGC-GGCTCGGC-TTCGAG GAAGG CTCGAACGCCAAGCCCGC-CGA TTTCGTCATCGAGAA Swit_0104 98532 - 99341 + | ferredoxin--NADP(+) reductase Swit_0105 101393 - 99465 - | peptidase M61 domain-containing protein TERM 56 102019 - 101993 - g 73 -12.2 -3.53012 | TCCGTCTCGCCGAAA GCGGGGTGCTGA CGA TCAGCGCCGCGC CCGGCATCGCCGCGG Swit_0106 101719 - 102603 + | LysR family transcriptional regulator Swit_0107 102767 - 105019 + | DNA topoisomerase IV subunit A Swit_0108 105080 - 106864 + | diguanylate cyclase/phosphodiesterase Swit_0109 108045 - 106840 - | polynucleotide adenylyltransferase region Swit_0110 108647 - 108042 - | NUDIX hydrolase Swit_0111 109219 - 108644 - | hypothetical protein TERM 57 109046 - 109022 - G 74 -13.5 -3.30441 | opp_overlap 109009 CAGGATCGTCGAGAA CAGCCGCACCA TCG CGGCGCGGCCG ATCGGCGATCCTTCA Swit_0112 109762 - 109235 - | GCN5-related N-acetyltransferase Swit_0113 109870 - 110505 + | glutathione S-transferase domain-containing protein Swit_0114 110628 - 111389 + | short-chain dehydrogenase/reductase SDR Swit_0115 111410 - 111808 + | dihydroneopterin aldolase Swit_0116 112735 - 111851 - | hypothetical protein Swit_0117 112986 - 113633 + | TonB family protein TERM 58 113640 - 113668 + F 93 -13.8 -4.18018 | AAGGATTGAGCTTTG GCCGGGTCGGCA CCCCT TGCCCGCCCGGC TTTTCACTGACCGAA TERM 59 114037 - 114015 - g 70 -12 -3.30443 | GGACCAGCACACCAA GCTGACCGAC CCG GTCGACCAGC ATGAGTGGCTGACCG Swit_0118 113719 - 114444 + | MotA/TolQ/ExbB proton channel TERM 60 114499 - 114445 - f 95 -19.4 -3.53444 | gap 1, opp_overlap 114459, overlap 114459 GCCGTCAAGAAGTAA GCGGCTGACGAACAGGGGCGGGTGC GTCCGT GCACCCGCCCCT-TTCGCCAGAAAC AGAAAGGCCAGGAAC TERM 61 114459 - 114486 + F 100 -20.6 -3.53012 | opp_overlap 114445 114459 AGCGGCTGACGAACA GGGGCGGGTGCG TCCG TGCACCCGCCCC TTTCGCCAGAAACAG TERM 62 114486 - 114459 - f 95 -19.9 -3.13522 | opp_overlap 114459, overlap 114445 AGCGGCTGACGAACA GGGGCGGGTGC GTCCGT GCACCCGCCCC TTTCGCCAGAAACAG TERM 63 114519 - 114505 - f 91 -9.2 -4.40003 | overlap 114514 CGCCAGAAACAGAAA GGCCAG GAA CCGGCC CAGCGCCGGTCATCC TERM 64 115011 - 115049 + G 70 -9.4 -3.84451 | overlap 115018 CGCGTCGGCTTCATT TCGGAACCGCCAGCTGGC TAC GCCAGCGCGCGTCTCTGA TTTCGCTTTCGAGGA Swit_0119 114567 - 115049 + | biopolymer transport-like protein Swit_0120 115074 - 115502 + | biopolymer transport protein ExbD/TolR TERM 65 115529 - 115548 + T 100 -16.4 -5.63517 | opp_overlap 115529 CACTCGATACGAAAA GGGCGGCC CTCG GGCCGCCC TTTTTTGTTTGGAAG TERM 66 115548 - 115529 - T 100 -16.4 -4.35116 | opp_overlap 115529 CACTCGATACGAAAA GGGCGGCC CTCG GGCCGCCC TTTTTTGTTTGGAAG Swit_0121 116676 - 115690 - | ribokinase-like domain-containing protein Swit_0122 116790 - 117731 + | hypothetical protein TERM 67 118257 - 118291 + G 81 -3.2 -4.82901 | overlap 118258 118268 TGGTGATCGACGTCG ACACGCCCGAAGCGCT CGC GGCGGCGCGGGCGAGA TTTTTATAGCGGACG Swit_0123 117728 - 118300 + | MobA-like protein TERM 68 118302 - 118352 + T 100 -18.4 -4.59944 | overlap 118306 118308 CGAGATTTTTATAGC GGACGCTAGACTCGATCCGGTTCA GGT TGAACCGGATCGAGTCCGCTTTCC TTTGTTTGTCGTGAT TERM 69 118306 - 118347 + T 100 -21.1 -4.29621 | gap 1, overlap 118302 118308 ATTTTTATAGCGGAC GCTAGACTCGATCCGGTTCA GGT TGAACCGGATCGAGTCC-GC TTTCCTTTGTTTGTC TERM 70 118308 - 118346 + T 95 -21.2 -3.16146 | overlap 118306 118302 TTTTATAGCGGACGC TAGACTCGATCCGGTTCA GGT TGAACCGGATCGAGTCCG CTTTCCTTTGTTTGT TERM 71 118461 - 118414 - T 72 -11.9 -3.3573 | gap 1 GAAATCACTCTATAA GGACCGCAG-CGCCGCTGCCGG GCGCG CCGCCAGCACCGGCAGCGATCC GAGCAGGCCGATGCC Swit_0124 120903 - 118408 - | hypothetical protein TERM 72 118594 - 118570 - G 70 -14.9 -2.71268 | overlap 118567 GGTGACGACATACCA GCCGGCCGCCG TCC CGGCCGCCAGC GCGAGCAGCGCGATG Swit_0125 121586 - 120900 - | ABC transporter related TERM 73 121718 - 121668 - R 88 -8.1 -4.72272 | gap 1, overlap 121669 GGGGCGGAGGAAAAA GCTCTCC-CACCCGTCATCCCGGC GGAG GCCGGGATCTCAGGAGAGGGGAGG CGAGGTCGTCGCAGG TERM 74 121717 - 121669 - R 74 -11.6 -3.43042 | gap 1, overlap 121668 GGGCGGAGGAAAAAG CTCTCC-CACCCGTCATCCCGGC GGAG GCCGGGATCTCAGGAGAGGGGAG GCGAGGTCGTCGCAG TERM 75 121781 - 121804 + r 100 -13.8 -5.37593 | opp_overlap 121781 ACGTAATCAAAAAAA GGCCCGCCTC TTTC GAGACGGGCC TTTTTTCGTTTCGAA TERM 76 121804 - 121781 - R 100 -16 -5.64006 | opp_overlap 121781 ACGTAATCAAAAAAA GGCCCGCCTC TTTC GAGACGGGCC TTTTTTCGTTTCGAA Swit_0126 124138 - 121823 - | ATP-dependent Clp protease, ATP-binding subunit clpA Swit_0127 124489 - 124262 - | hypothetical protein TERM 77 125346 - 125371 + G 82 -14.7 -3.53091 | opp_overlap 125327, overlap 125347 CTGACCCTGACCGGA TCGACGCTGCG GCCG CGCAGCGTCGC TTTCAAGACGGCGGT TERM 78 125347 - 125370 + G 78 -18.2 -2.71712 | opp_overlap 125327, overlap 125346 TGACCCTGACCGGAT CGACGCTGCG GCCG CGCAGCGTCG CTTTCAAGACGGCGG Swit_0128 124542 - 125537 + | quinone oxidoreductase putative, PIG3 Swit_0129 126156 - 125551 - | hypothetical protein Swit_0130 126698 - 126267 - | hypothetical protein Swit_0131 126886 - 126710 - | hypothetical protein Swit_0133 127798 - 129042 + | queuine tRNA-ribosyltransferase Swit_0134 129891 - 129052 - | xylose isomerase domain-containing protein TERM 79 130029 - 130003 - R 100 -22.4 -4.8622 | opp_overlap 130003 TGCGGGAATCAAAAA CCCCGGCAAGTC AGT GACTTGCCGGGG TTTGTGGTGGGCGTG TERM 80 130003 - 130029 + r 100 -22.4 -3.96624 | opp_overlap 130003 TGCGGGAATCAAAAA CCCCGGCAAGTC AGT GACTTGCCGGGG TTTGTGGTGGGCGTG Swit_0135 130543 - 130169 - | response regulator receiver protein Swit_0136 130704 - 131564 + | N-formylglutamate amidohydrolase TERM 81 131718 - 131688 - T 100 -14.1 -5.24129 | gap 1, overlap 131691 CTCCCGCACAAAAAA GAACCACCTCGTGC TTAC GCACGAGGTGGC-C AAGGTTCAGGGAGGA TERM 82 131716 - 131691 - T 100 -19.1 -4.72201 | overlap 131688 CCGCACAAAAAAGAA CCACCTCGTGC TTAC GCACGAGGTGG CCAAGGTTCAGGGAG Swit_0137 132759 - 131983 - | SapC family protein Swit_0138 134345 - 132825 - | FAD linked oxidase domain-containing protein Swit_0139 134448 - 134927 + | hypothetical protein TERM 83 136148 - 136115 - g 83 -15.4 -3.63515 | GCTGACCGGCAACAA GATCGC-CCGGCGCGG CAAG CCG-GCCGGCGCGATC GAGGAGGCGGCCCCG TERM 84 136266 - 136220 - g 71 -10.6 -3.79113 | overlap 136191 136190 ACGCCGCGAGAAGAA GGCCGAAGTGCCCGCGCCGCGC GAG GCGAAGCGCGAGGAGCGCGACC GTCGCCCGCGCCGCG Swit_0140 135024 - 136370 + | DEAD/DEAH box helicase domain-containing protein Swit_0141 137952 - 136546 - | hypothetical protein Swit_0142 139584 - 138007 - | phospholipase D TERM 85 138052 - 138094 + g 70 -12.6 -3.30441 | gap 1, overlap 138064 CAGCTTGCGGAACTT GCGCCGCCAGCGGCCGCGA TTGCGT TCGCG-CCGGGCGCGGCGC TTCTCGCGGATCGTG Swit_0143 141115 - 139682 - | polysaccharide biosynthesis protein Swit_0144 141866 - 141195 - | hypothetical protein Swit_0145 142508 - 141897 - | glutathione S-transferase domain-containing protein Swit_0146 142614 - 143315 + | helix-turn-helix, type 11 domain-containing protein Swit_0147 143545 - 143336 - | hypothetical protein Swit_0148 143978 - 143619 - | response regulator receiver/SARP domain-containing protein Swit_0149 145570 - 143975 - | hypothetical protein Swit_0150 146079 - 145567 - | hypothetical protein Swit_0151 146216 - 147055 + | LysR family transcriptional regulator Swit_0152 148198 - 147170 - | alcohol dehydrogenase Swit_0153 148278 - 148895 + | TetR family transcriptional regulator Swit_0154 149126 - 150481 + | phage integrase family protein TERM 86 150603 - 150561 - g 72 -13.2 -3.17051 | overlap 150559 TCTTCATGAGCAAGA GCTTCGCGCGCTTTGCCCGC AAG GCGGGCTTGGCCAGCGAAGC GCTGATCGAAGCGGC Swit_0155 150539 - 150928 + | hypothetical protein Swit_0156 150906 - 151238 + | XRE family transcriptional regulator Swit_0157 151709 - 151314 - | hypothetical protein Swit_0158 152434 - 151817 - | hypothetical protein Swit_0159 153385 - 152453 - | hypothetical protein Swit_0160 154114 - 153521 - | hypothetical protein Swit_0161 154172 - 155143 + | P-type conjugative transfer ATPase TrbB Swit_0162 155140 - 155454 + | conjugal transfer protein TrbC Swit_0163 155454 - 155720 + | Type IV secretory pathway TrbD component-like protein TERM 87 157578 - 157609 + G 74 -10.8 -3.68024 | gap 1, opp_overlap 157572, overlap 157580 157582 GAGACCGAAGGGCTG GTCGGCA-CGCCGGC CGC GCCGGCGGTGCTCGC TTATCTGTTCCACCG Swit_0164 155727 - 158195 + | AAA ATPase Swit_0165 158192 - 158926 + | P-type conjugative transfer protein TrbJ TERM 88 158997 - 158939 - g 72 -8.8 -4.08216 | gap 3, overlap 158923 158940 TGAGGCGCCGGAAAA GCCGGCGCCCGCGAAGCGCGCGGGACGAA CGCT CCCGTTCCGCGCGCT-CGCTATCGC-G-C TGCTGATCCTCGCCG Swit_0166 158919 - 159284 + | hypothetical protein Swit_0167 159290 - 160606 + | P-type conjugative transfer protein TrbL TERM 89 160840 - 160862 + G 73 -12.7 -3.53224 | GAGGTCGATCGCCTC GGAGCGGCG CGCGC CGTCGCTCC TTTGGAGGCCGGCTA Swit_0168 160603 - 161292 + | conjugal transfer protein Swit_0169 161296 - 162132 + | P-type conjugative transfer protein TrbG Swit_0170 162132 - 163319 + | conjugation TrbI family protein Swit_0171 163589 - 163326 - | hypothetical protein Swit_0172 163608 - 163835 + | XRE family transcriptional regulator Swit_0173 164815 - 163859 - | LysR family transcriptional regulator Swit_0174 165517 - 165032 - | hypothetical protein Swit_0175 166373 - 165609 - | LuxR family transcriptional regulator Swit_0176 167058 - 166438 - | ECF subfamily RNA polymerase sigma-24 factor TERM 90 166486 - 166500 + g 71 -2.1 -4.65895 | gap 1 GATAGCTTTGGACAT GC-GTC GCTG GACTGC TTTTTCACTCAAACC Swit_0177 169044 - 167308 - | Type IV secretory pathway VirD4 components-like protein Swit_0178 171488 - 169044 - | Ti-type conjugative transfer relaxase TraA Swit_0179 171641 - 171967 + | hypothetical protein TERM 91 172213 - 172200 - g 90 -9.5 -4.77036 | overlap 172201 GCGGAGGAGGAAAAA GCGGC GCGC GCCGC GGCGGTCGTCCGCAA Swit_0180 171984 - 172247 + | conjugal transfer TraD family protein Swit_0181 172963 - 172259 - | lytic transglycosylase, catalytic Swit_0182 173403 - 172960 - | Type IV secretory pathway protease TraF-like protein Swit_0183 174275 - 173517 - | hypothetical protein Swit_0184 174802 - 174539 - | hypothetical protein TERM 92 175032 - 175005 - R 100 -24.2 -4.67563 | GAAGAGAAAGGAAAA GCCCCGCCCGGA TGGC TCCGGGCGGGGC GCTGGTCGGGCGGCT Swit_0185 175598 - 175047 - | hypothetical protein TERM 93 175467 - 175497 + g 89 -6 -5.14563 | overlap 175469 GCAGCCGAAGGCCCG GAGCATCCGCGG AGGACGG CGGCGGGTGCGC TTTTTTGCTCCGCGC TERM 94 175569 - 175542 - G 82 -4 -5.0538 | overlap 175543 CCGCAGGGGAAAAAA GCGTTGCCGCAA GCCG TTGCGGCCATGA GCGGCAGAGGCGAAG TERM 95 176687 - 176701 + G 88 -12.8 -4.27316 | opp_overlap 176676 176686 176685 GATAGGCCACAAACT CGGCGG CCC CCGCCG TTTTGGATTCGAGCG Swit_0186 176196 - 177875 + | recombinase Swit_0187 178366 - 177968 - | hypothetical protein TERM 96 179452 - 179424 - g 79 -14.6 -3.29461 | CAAGCCCGGGCAGAA GGC-GCCGCCTCGC AAG GCG-GGCGGCCGCC GAAAGGCTGCCCCGG Swit_0188 178990 - 179478 + | MucR family transcriptional regulator Swit_0189 179510 - 179989 + | hypothetical protein Swit_0190 180912 - 180004 - | hypothetical protein Swit_0191 182258 - 181212 - | hypothetical protein TERM 97 181906 - 181922 + g 79 -15.1 -3.36289 | opp_overlap 181888 GCCGCCCTGCACGAT CCGCGCG GTG CGCGCGG TTCATTCGGGTCGTA TERM 98 182307 - 182277 - R 100 -13.2 -4.56597 | opp_overlap 182283, overlap 182279 TGCCTCCCGCAAAAA GATGGGGTCCGCCG CAG CGACGGACCCCAGG GCTGGCGGGGACTAT TERM 99 182305 - 182279 - R 100 -20.2 -3.90048 | opp_overlap 182283, overlap 182277 CCTCCCGCAAAAAGA TGGGGTCCGCCG CAG CGACGGACCCCA GGGCTGGCGGGGACT Swit_0192 184430 - 182319 - | ParB family protein Swit_0193 186058 - 184862 - | hypothetical protein TERM 100 185595 - 185631 + g 74 -12.3 -3.57615 | gap 1, overlap 185627 CGGCCATAGTCCGGA CCGGTGACGGCGCGCA GCTCGG TGCG-GCCGTCCTCGG TTTCCAGAGTCTTCA TERM 101 185992 - 185971 - G 71 -10.1 -3.73953 | ACCATTCGGAGGAAA CGCGGCC GATGCGCT GGCCGCG GGAAATGTCGACCCT Swit_0194 186516 - 186280 - | hypothetical protein Swit_0195 186619 - 187482 + | hypothetical protein TERM 102 187971 - 187996 + G 77 -14.7 -3.14564 | GCAGCGATCTCGAGC GCTGCCTGGTG GTTG CACCTGGCAGC TTGGTCGAGCAGTGG TERM 103 189884 - 189895 + G 71 -2.2 -4.55295 | gap 1, overlap 189880 CTGATCCACCAGCAG C-CGG TCG CCGCG TTTGTTTGTCCCGGC TERM 104 190154 - 190121 - g 100 -18.9 -3.91897 | gap 1 GCCGCGATCGACAAA GCCG-GCGATGCCCGC AAC GCGGGCATCGCGCCGC ACCTTAACCTGCGGC Swit_0196 187508 - 191011 + | helicase domain-containing protein Swit_0197 191049 - 195293 + | hypothetical protein TERM 105 196912 - 196925 + G 79 -2.3 -4.85653 | overlap 196913 GATAATATCGCATAT GCCGA TCTC TCGGA TTTCTTTTATGTCTG Swit_0198 195277 - 198078 + | hypothetical protein TERM 106 199115 - 199099 - g 70 -12.3 -3.30441 | CATGATCGCCGAGAA CGATGCC AAC GGCATCG CGCCGGGCTCCAACG TERM 107 199713 - 199655 - g 71 -2.1 -4.57569 | gap 1, opp_overlap 199662, overlap 199656 GGATCGCTCGAAAAA TTCCAGCGCACGCGCGGCGTCCTGCGCC TGAT GGCGCAGGCTATC-CACGAGCTTTGGAT GAGCGCCGACCCGTC TERM 108 200592 - 200574 - g 78 -6.6 -4.53034 | opp_overlap 200584 200588, overlap 200576 GGGAGACAATGAAAA CCCGCCTC AAG GAGGCATG GTGCTACCTGCATTA Swit_0199 198092 - 201388 + | AAA family ATPase Swit_0200 201457 - 202764 + | hypothetical protein TERM 109 202792 - 202782 - g 71 -2.4 -4.58283 | opp_overlap 202753, overlap 202784 GAATTCCCCGAAAAA TCGG CCC CCGT CCTCTACATTCCCGA TERM 110 203826 - 203855 + G 73 -7.1 -4.15044 | opp_overlap 203826 203825 203822 CTGGATACATACAAG CAGCGCTTTGGGG CCTA TCCAAAAGAGCTG TTTATTCACGGCCGG Swit_0201 202761 - 204317 + | hypothetical protein Swit_0202 205171 - 204785 - | hypothetical protein Swit_0203 205913 - 205257 - | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase Swit_0204 206668 - 205910 - | dihydrodipicolinate reductase Swit_0205 206797 - 207129 + | cupin 2 domain-containing protein Swit_0206 207126 - 207680 + | secreted Zn-dependent protease-like protein TERM 111 208069 - 208121 + G 75 -16.7 -2.85545 | overlap 208067 208070 CGGCGGCGCGATGCT CGACGGGACGCGGTGCGGCGGCTGC GGC GCGGCCGACACGCTGCGCCCCGACA TCGTCTTCTTCGGCG Swit_0207 207677 - 208381 + | NAD-dependent deacetylase era 209424 - 208531 - | GTP-binding protein Era Swit_0209 210125 - 209421 - | RNAse III Swit_0210 210152 - 210328 + | hypothetical protein Swit_0211 210616 - 210338 - | hypothetical protein TERM 112 210628 - 210650 + r 71 -13.4 -2.52464 | CCATGGTCGTCTCCA GTCGGCCGCA TGA TGCGGCCGAA TGCGTTAACGAAAGC Swit_0212 211076 - 210675 - | flagellin-specific chaperone FliS-like protein Swit_0213 212727 - 211096 - | flagellar hook-associated 2 domain-containing protein TERM 113 211296 - 211324 + g 71 -10.3 -3.7282 | overlap 211297 GGGTCTGCGAGGCGG TGAGCTGGCCG GACGAGG CGGTCAGCTCG TTCTTGATCGCATCG flhB 214093 - 212954 - | flagellar biosynthesis protein FlhB Swit_0215 214879 - 214097 - | flagellar biosynthetic protein FliR Swit_0216 215171 - 214890 - | flagellar biosynthetic protein FliQ fliP 216044 - 215208 - | flagellar biosynthesis protein FliP Swit_0218 218351 - 216147 - | primosome assembly protein PriA TERM 114 217722 - 217758 + g 73 -12.3 -3.41051 | gap 1 CTCCGCCAGCATGCC GGCGG-CGAGCTGCTG CTCGTC CGACAGCTCGACCGCC TTATGGTCGGGATCG Swit_0219 218460 - 219113 + | putative translaldolase TERM 115 219116 - 219164 + F 87 -18.8 -2.53911 | gap 1, opp_overlap 219094 GAGCATCCTCTGATC CCGCTGGCGCTGCTGCTGGCCGC CGAG GCG-CCGGCAGCGGCGCCGACGA TGCCTTCGACCTTGG Swit_0220 219164 - 219466 + | hypothetical protein Swit_0221 219644 - 220204 + | hypothetical protein Swit_0222 220189 - 221115 + | phage integrase family protein TERM 116 221157 - 221131 - T 100 -13.6 -5.00616 | overlap 221132 TCCCCCCTCAAAAAA TCCTCCCTGGCC GCA GGCCGGGGAGGG GGACCGCCCATAGGG TERM 117 221156 - 221132 - T 100 -17.1 -3.60048 | overlap 221131 CCCCCCTCAAAAAAT CCTCCCTGGCC GCA GGCCGGGGAGG GGGACCGCCCATAGG Swit_0223 225325 - 221291 - | LVIVD repeat-containing protein Swit_0224 227103 - 225361 - | hypothetical protein TERM 118 225820 - 225859 + g 70 -8.6 -3.8917 | opp_overlap 225825, overlap 225815 225823 GGTGTCGGCGCCCGC GAAGATCGGGTTCTCG AAGATCGC CGAGAAGCCGGTCTCC TTGTTGTCCTTCGGC TERM 119 226512 - 226495 - G 71 -9.9 -3.71848 | CTTGTCGACGAAGAA TTCCTGG ACGC CCAGGAA AGTGTCGGTGCGGTG TERM 120 227359 - 227340 - gR 73 -12.8 -3.16564 | opp_overlap 227351 227353 GGGGCAGTTGACGAA GCGCAGGC GGAC GCCCGCGC CGACCGCCACGATGA TERM 121 228897 - 228864 - gR 90 -18.1 -3.05727 | CGAAGAGGACAGATA GGCGCCGGTGATCGC CTTG GCGATCGCCGCCGCC GCGAGCGGGTTGGCG Swit_0226 230695 - 229283 - | hypothetical protein Swit_0225 227178 - 229349 + | hypothetical protein Swit_0227 232248 - 230812 - | aldehyde dehydrogenase Swit_0228 233996 - 232344 - | acetolactate synthase Swit_0229 235809 - 234277 - | cysteinyl-tRNA synthetase TERM 122 235962 - 235992 + r 76 -6.7 -4.48987 | opp_overlap 235945, overlap 235963 CGAGGCAGGAGCCGC CCGAGATGCCGGC CTCCC GCCGGCATGACGC TTTTGGTTGTGACGG TERM 123 236053 - 236024 - R 100 -19.3 -4.06419 | overlap 236027 GGCGTGCATAAAGAA GAAGGCCGGCAGG TCGC CCCGCCGGCCTCC GCTCTGCCCCGAAGG TERM 124 236050 - 236027 - R 100 -17.4 -4.15703 | overlap 236024 GTGCATAAAGAAGAA GGCCGGCAGG TCGC CCCGCCGGCC TCCGCTCTGCCCCGA Swit_0230 236833 - 236075 - | hypothetical protein TERM 125 236797 - 236815 + g 71 -2.2 -4.55295 | opp_overlap 236789 236790, overlap 236802 CAAGGAACGCCGCAA TGGCAGCC TGC GGCCGGCG TTTATTTGTCCAGAG Swit_0231 238844 - 236817 - | putative adenylate/guanylate cyclase TERM 126 237016 - 237001 - G 72 -3.3 -4.56597 | GCGGTTTCGGAAAAA TCGAA GACGGG TTCGA ACACTTCCATCGGGG TERM 127 237398 - 237381 - G 70 -12.7 -3.28712 | opp_overlap 237348 CGGCGCGCCCCAGAA GGCGACG ATCG CGTCGCC GACGAACTTGTCGAT Swit_0232 238969 - 240306 + | hypothetical protein Swit_0233 240322 - 240780 + | hypothetical protein Swit_0234 240932 - 241636 + | glutathione S-transferase domain-containing protein Swit_0235 242342 - 241656 - | hypothetical protein Swit_0236 242836 - 242399 - | hypothetical protein Swit_0237 244379 - 242964 - | peptidase M28 TERM 128 246086 - 246066 - g 90 -16.1 -3.72742 | CTATGAGGAAGACAA GCGCCGCCG CCT CGGCGACGC CGCCGACCGGGCCAG Swit_0238 244453 - 246132 + | putative ABC transporter ATP-binding protein TERM 129 246164 - 246140 - T 100 -12.2 -4.8622 | gap 1, opp_overlap 246140 CGCGTTAAGGAAAAA GCCCGG-ACCT CAAG AGGTTCCGGGC TTTTTCTTGTTCATT TERM 130 246140 - 246164 + T 100 -12.2 -5.3321 | gap 1, opp_overlap 246140 CGCGTTAAGGAAAAA GCCCGG-ACCT CAAG AGGTTCCGGGC TTTTTCTTGTTCATT TERM 131 246201 - 246250 + T 77 -13.1 -3.53811 | gap 1, opp_overlap 246201, overlap 246188 246185 GTCATCCTGGCGAAA GCCAGGATCTCCCT-TCTTCTT CGTCGGC AGGAAGGTAGTGAGATCCTGGC TTTCGCCAGGATGAC Swit_0239 246692 - 246273 - | hypothetical protein TERM 132 246779 - 246796 + r 81 -12.7 -3.78775 | opp_overlap 246789 AAAGGAAGCGTCAGG CCGGCGA GAAC TCGCCGG TTTCCTCGTCGAGCA Swit_0240 247406 - 246774 - | carbonate dehydratase Swit_0241 247474 - 248412 + | lipoyl synthase Swit_0243 249372 - 248836 - | CinA domain-containing protein Swit_0242 248414 - 248899 + | cyclase/dehydrase TERM 133 249249 - 249196 - GT 70 -12.4 -3.18735 | gap 2, opp_overlap 249237 CGAATAGGTGACGAA GCCGCAGCCGAGCACGTCCGACGATC CCGG GATC-TCGGTCA-GCGCGGCGGCGAC GAGGCCGCCGGTGCA ispDF 250537 - 249389 - | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein TERM 134 250665 - 250615 - H 77 -12.6 -3.53811 | opp_overlap 250602 250599 250615 250654 GTCATCCTGGCGAAA GCCAGGATCTCCCTTCTTTCCC GGGATGT GGGAAGGCAGGGAGATTCCAGC TTTCGCTGGAATGAC TERM 135 250615 - 250665 + H 77 -13.3 -3.65902 | opp_overlap 250615, overlap 250602 250599 250654 GTCATCCTGGCGAAA GCCAGGATCTCCCTTCTTTCCCG GGATG TGGGAAGGCAGGGAGATTCCAGC TTTCGCTGGAATGAC Swit_0245 250766 - 251767 + | nifR3 family TIM-barrel protein Swit_0246 251743 - 252864 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 136 253797 - 253835 + G 78 -12.3 -3.71848 | overlap 253798 ATCCGCCTGCCGGCG TTGCGCCAGCGCGGCGA CGACA TCGGCGAGCTGGCGCGC TTCTTCCTCGACCGG TERM 137 253798 - 253834 + G 75 -15.8 -2.82895 | overlap 253797 TCCGCCTGCCGGCGT TGCGCCAGCGCGGCGA CGACA TCGGCGAGCTGGCGCG CTTCTTCCTCGACCG Swit_0247 252861 - 254318 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family Swit_0248 255078 - 254329 - | hypothetical protein TERM 138 255197 - 255147 - H 100 -16.8 -4.00532 | overlap 255142 GCGGGAAAGAGCAAA GTCGGGCCGCCGATATCGGCGG GGCCGAT CGGCCGCTATCGCCGGACCGAC GACCCCGCTCGACCA TERM 139 255297 - 255342 + G 78 -12.6 -3.74519 | gap 3, overlap 255321 TTGTATCCAGGCGAT GGC-GCAGGCGCGCGGTGACGGC GCT GCGGCCAC-G-GCGCCTGCTGCC TTTGCTGGAGATATT TERM 140 257291 - 257248 - g 82 -15.8 -3.28712 | opp_overlap 257249, overlap 257249 CGTGCTGGCCGACAA CGGTCCCGGCCTGCCGCCCG AGCG CGAGCGGCTGACCGAGCCCT ATATGACGACGCGCA TERM 141 257290 - 257249 - g 79 -19.3 -2.57132 | opp_overlap 257249, overlap 257248 GTGCTGGCCGACAAC GGTCCCGGCCTGCCGCCCG AGCG CGAGCGGCTGACCGAGCCC TATATGACGACGCGC Swit_0249 255218 - 257524 + | multi-sensor signal transduction histidine kinase Swit_0250 257528 - 258916 + | two component, sigma54 specific, Fis family transcriptional regulator hfq 259186 - 259668 + | RNA-binding protein Hfq Swit_0252 259665 - 260993 + | GTP-binding protein, HSR1-related Swit_0253 261815 - 261084 - | MazG family protein Swit_0254 262711 - 261821 - | LysR family transcriptional regulator TERM 142 263033 - 262997 - g 85 -17.3 -3.17723 | gap 1 CGACCCCGAAGCCAA GGCGCGCGACGCCGAC CGCCAT GTCGGCG-CGCGCGGC AACGACCTCGCCAGC Swit_0255 262797 - 264284 + | hypothetical protein TERM 143 264748 - 264772 + GT 76 -7.1 -4.37092 | overlap 264748 264749 264749 TTCGGACGGACTTTC TCCGATATCCT ATC GGGTTATCGGG TTTTCTCGCGACGGT Swit_0257 266009 - 265209 - | ABC transporter related Swit_0256 264316 - 265269 + | glycosyl transferase family protein Swit_0258 267007 - 266003 - | transport system permease protein Swit_0259 267017 - 267889 + | periplasmic binding protein TERM 144 267957 - 267939 - T 83 -13.2 -3.85698 | GGCGCTCGGGATAAA CTTCAGCC AAA GGCTGAAG GCTGGCATCCATGTC Swit_0260 268758 - 268045 - | hypothetical protein Swit_0261 269962 - 268775 - | toxic anion resistance family protein TERM 145 270144 - 270164 + H 73 -11.1 -3.5627 | opp_overlap 270155, overlap 270161 GTCGAATCGGGCGCC GGCCCGC AAAGGGA GCGGGCC TTTCAGGCATCCTCT TERM 146 270193 - 270216 + H 100 -12.4 -5.93809 | CTCCTAATGACTTAC GGGCTGGTTC TTCG GAGCCGGCCC TTTTTTTTGTCGGCG Swit_0262 270347 - 272170 + | GTP-binding protein TypA Swit_0263 272602 - 272336 - | hypothetical protein Swit_0264 274201 - 272765 - | glutamate synthase (NADH) small subunit TERM 147 273358 - 273404 + g 70 -8.5 -3.8512 | overlap 273345 TGCCGGTCGCGGTCA GCGAGCCGCGCGGCG-CGGCCCG CAG CTCGTCGTCGCCG-GCGACCCGC TTGTTCTGCTGGGTC Swit_0265 278969 - 274215 - | glutamate synthase (NADH) large subunit TERM 148 276034 - 276080 + g 85 -17.2 -3.14344 | GCGACCTGCTTGATC GCCGAGCGCATCGAGTCGCCGT TGG GCAGCGGCTTGAAGCGATCGGC TTCCTCGCCGCCCTC TERM 149 278177 - 278160 - G 70 -12.7 -3.28712 | opp_overlap 278168 GGTGTTGGTCGAGAA GCGCTGG TGGA CCAGCGC GATCGCCGAGGTGGT Swit_0266 279135 - 279917 + | UspA domain-containing protein TERM 150 280489 - 280510 + G 86 -13.7 -3.88232 | CTGGAGCGAGGCCGA GGCGGTCGG GCAG CCGATCGCC TTCTTCTATCCGCCC Swit_0267 279959 - 281854 + | PAS/PAC sensor signal transduction histidine kinase Swit_0268 281847 - 282458 + | two component LuxR family transcriptional regulator Swit_0269 282571 - 284085 + | catalase TERM 151 284127 - 284151 + F 100 -17.9 -3.75153 | overlap 284109 284116 GCTTCGGCCGTCCGA CGGGGAAGGGC GTT GTCCTTCCCCG TTTCGATTCCGGCCC Swit_0270 284371 - 286119 + | binding-protein-dependent transport systems inner membrane component Swit_0271 286162 - 287469 + | ABC transporter related TERM 152 287493 - 287542 + G 81 -18.5 -2.78816 | gap 1 GCATCCTGGGGGGCG TGGCTGCTGCTGGCGGCGCCGGGC CCC GCCTT-CGCGGCCGGCGGCGGCCA TGTCGTCGACGATGC Swit_0272 287469 - 288143 + | hypothetical protein Swit_0273 288229 - 289152 + | hypothetical protein Swit_0274 290781 - 289177 - | phosphate transporter Swit_0275 290959 - 292200 + | amidohydrolase Swit_0276 292197 - 292670 + | hypothetical protein TERM 153 292753 - 292722 - T 100 -17.4 -4.36914 | gap 1, opp_overlap 292712, overlap 292723 GGTCGTCGGACAAAA GGAGAGGCCTGACGG CAT CCGTCAAGCCTC-CC AGACGTCCCATGCTT TERM 154 292753 - 292723 - T 95 -19.8 -3.21934 | opp_overlap 292712, overlap 292722 GTCGTCGGACAAAAG GAGAGGCCTGACGG CAT CCGTCAAGCCTCCC AGACGTCCCATGCTT Swit_0277 295190 - 292863 - | TonB-dependent receptor TERM 155 295065 - 295109 + g 90 -20.1 -3.15544 | gap 3 GACGATGTCGTCGAT GCCGCCGGCGGCCGGCGCCTCG TCGG CG-GGCGCCG-CC-CTGGCGGC TTCCTGCGCCTGGGC TERM 156 295178 - 295190 + g 77 -3.4 -4.74132 | TACTGGCGATGTGTA GTGA TTGTT TCAC TTTTTCCTCCCCTGT TERM 157 295925 - 295872 - g 77 -17.4 -2.62515 | gap 3 AAGGGCTGGAGATCA TGA-CCGCGCGGCGCGCCGCCGAG-CG GAT CGACGCGGCGG-GCGTCGCGCGGCTCG AGGCGATCCTCGCCG Swit_0278 295457 - 296254 + | GntR family transcriptional regulator Swit_0279 296382 - 297269 + | gluconolactonase Swit_0280 297308 - 297868 + | hypothetical protein Swit_0281 298068 - 298880 + | hypothetical protein Swit_0282 298877 - 300355 + | AMP-dependent synthetase and ligase Swit_0283 300348 - 301424 + | L-carnitine dehydratase/bile acid-inducible protein F Swit_0284 301409 - 302227 + | xylose isomerase domain-containing protein Swit_0285 302696 - 302373 - | ferredoxin TERM 158 302707 - 302717 + H 71 -8.2 -3.83459 | overlap 302704 ATCATGTCTTCCTAG GGCG GGC CGCC TATTTTCGTCTTCTG TERM 159 303101 - 303143 + G 78 -14.1 -3.60805 | gap 2 GCGCGTCTCGGCGAT GCCGGCCAAGGGCTGCGGGCG CTG CGCCTCCTGCC-T-GGCCGGC TTTCCGCTGGGCTGT Swit_0286 302847 - 303860 + | alcohol dehydrogenase Swit_0287 303857 - 305008 + | hypothetical protein Swit_0288 305011 - 305514 + | hypothetical protein TERM 160 305535 - 305511 - T 82 -14.3 -3.30441 | opp_overlap 305503 GATGATCCCGGAGAA TTGAGGCGGCG GGG CGCGGCCTCAA ATCACCCCTTCGTCC Swit_0289 306761 - 305532 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_0290 306951 - 307754 + | enoyl-CoA hydratase Swit_0291 307756 - 308898 + | NADH:flavin oxidoreductase/NADH oxidase Swit_0292 308895 - 309467 + | hypothetical protein Swit_0293 309464 - 310231 + | short-chain dehydrogenase/reductase SDR Swit_0294 311540 - 310386 - | oxidoreductase domain-containing protein Swit_0295 311704 - 312666 + | short-chain dehydrogenase/reductase SDR Swit_0296 312659 - 313564 + | palmitoyl-CoA hydrolase Swit_0297 313585 - 314433 + | taurine catabolism dioxygenase TauD/TfdA Swit_0298 315792 - 314443 - | major facilitator transporter Swit_0299 315865 - 316662 + | enoyl-CoA hydratase Swit_0300 316680 - 317468 + | short-chain dehydrogenase/reductase SDR Swit_0301 318259 - 317507 - | TetR family transcriptional regulator Swit_0302 318450 - 320837 + | TonB-dependent receptor TERM 161 320866 - 320890 + F 100 -17.9 -5.09259 | AAGGCCGAACCTCAG CAGGGGCGCAC CAT GTGCGTCCCTG TTTTCTTTTGGCCTG Swit_0303 320929 - 322011 + | hypothetical protein Swit_0304 322832 - 322008 - | short-chain dehydrogenase/reductase SDR TERM 162 322490 - 322527 + g 71 -11.4 -3.63073 | gap 2, opp_overlap 322519, overlap 322480 AGGTCGCGTCGTCGA TGTCGG-CG-AGCTTCGG TCCG CCGAAGCCACGGCCGACA TTGTTGACCAATATG Swit_0305 323589 - 322843 - | short-chain dehydrogenase/reductase SDR Swit_0306 324074 - 323586 - | hypothetical protein Swit_0307 325228 - 324089 - | hypothetical protein Swit_0308 326457 - 325225 - | hypothetical protein Swit_0309 326572 - 327534 + | transcriptional regulator Swit_0310 329108 - 327507 - | AMP-dependent synthetase and ligase Swit_0311 329542 - 329111 - | carboxymuconolactone decarboxylase TERM 163 329330 - 329354 + g 73 -12.9 -3.50853 | overlap 329332 CTGGCGCTGCGCCAC CAGCATCGCGA TGA TCGCGATGCTC TTCTCCTTGCGGCCG TERM 164 329332 - 329352 + g 79 -15.5 -3.32946 | overlap 329330 GGCGCTGCGCCACCA GCATCGCGA TGA TCGCGATGC TCTTCTCCTTGCGGC Swit_0312 331306 - 329570 - | amidohydrolase 3 Swit_0313 331618 - 332850 + | amidohydrolase 2 TERM 165 332919 - 332880 - T 91 -16.5 -3.53811 | opp_overlap 332883, overlap 332883 TTCAGTCCCCGGAAA GGAGC-TCCGGCACGGCCG TCAC CGGCCG-GCCGGACGCTTC ATGCCCGGCGTCGAT TERM 166 332916 - 332883 - T 83 -16.8 -2.90615 | opp_overlap 332883, overlap 332880 AGTCCCCGGAAAGGA GC-TCCGGCACGGCCG TCAC CGGCCG-GCCGGACGC TTCATGCCCGGCGTC TERM 167 332883 - 332916 + T 86 -16.8 -3.14344 | opp_overlap 332883 332880 AGTCCCCGGAAAGGA GC-TCCGGCACGGCCG TCAC CGGCCG-GCCGGACGC TTCATGCCCGGCGTC Swit_0314 333675 - 332866 - | transcriptional regulator IclR-like protein TERM 168 333736 - 333722 - H 74 -5 -4.57073 | TAGCCGTTCGAAAAA TCGAAC ACA ATTCGA AAAACCTTTGCGCAT Swit_0315 333812 - 334651 + | regulatory protein, IclR TERM 169 335186 - 335205 + G 78 -16.4 -3.01712 | ATCGACGTGGTCCGC CCCGGCGC GTCG GCGCCGGG TCTTGCCGACGACGA Swit_0316 334667 - 335632 + | alcohol dehydrogenase TERM 170 336011 - 336044 + G 77 -14.5 -3.14132 | opp_overlap 335998 336038 GATCGGCCCGGTGCT GTGCCGCTTCGGCAC CGAC GAGCAGAAGCGGCGC TTCCTCGCCGCCACC TERM 171 336735 - 336779 + G 73 -12 -3.51329 | gap 1, overlap 336726 CTGGCCGGCCCCGCC GGGC-TGGCCACGGCGGGGCA TGAC TGGCTCGCCGCGGCGGCGCCC TTCTACTTCACGATG Swit_0317 335709 - 336869 + | acyl-CoA dehydrogenase domain-containing protein Swit_0318 336876 - 338006 + | acyl-CoA dehydrogenase domain-containing protein Swit_0319 339021 - 338035 - | phytanoyl-CoA dioxygenase Swit_0320 340102 - 339134 - | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 172 339625 - 339578 - G 70 -12.7 -3.28924 | GAGCGCCGCGTAGAA GGCGAGGGCGGTGTCGACCG-CC GCCG GATCGGTCG-CATCGCCGCCGCC GACCTCGACCAGCGG TERM 173 340039 - 340019 - G 80 -16.1 -3.14132 | CCCGCTGCCGAGGAA GGCGGCGAC CCA GCCGCCGCC GATCACGCCGCCGCC TERM 174 340104 - 340128 + r 77 -2.7 -4.99435 | opp_overlap 340094 340095 CGAAACCCGCCCATG CCGGTCAATAG CCC TTGAAGACCGG TTTTTCCTTGTTGGC Swit_0321 340947 - 340108 - | 1,4-dihydroxy-2-naphthoate synthase Swit_0322 343237 - 340991 - | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase TERM 175 344410 - 344420 + G 75 -8.2 -4.11394 | ATTGCTCAACCGGAT CGCC GAG GGCG TTTTCGACATGCGGT Swit_0323 343307 - 344461 + | acyl-CoA dehydrogenase domain-containing protein Swit_0324 344488 - 345816 + | Rieske (2Fe-2S) domain-containing protein Swit_0325 345816 - 347468 + | 3-ketosteroid-delta-1-dehydrogenase Swit_0326 348605 - 347634 - | transcriptional regulator TERM 176 347768 - 347818 + g 73 -7.5 -4.12188 | gap 1, overlap 347742 347769 347771 CGATCGAGCGGTTCG ACT-TCTCCAGCATCCGCGTCGCC GCCT GGAGGCGCAGGTGCTGGATATAGC TTTTCGGGCTCATCC TERM 177 347939 - 347976 + g 77 -14.9 -3.17051 | overlap 347937 GCTGCTCCAGCCAGA TCTGCGCGCGGGCGA CGAGCGGA TCGCTCGCGAGCAGA TGTTCCTCCTCGCGA TERM 178 348731 - 348697 - H 82 -14.9 -3.28447 | gap 1, overlap 348695 348698 GGATCGACGAGAACA GCGCGCGGCGCCGGCC GATC GGTCG-CGCCGCGCGG ACAGGAGAGTTGCGA TERM 179 348730 - 348698 - H 86 -18.4 -2.56747 | gap 1, overlap 348695 348697 GATCGACGAGAACAG CGCGCGGCGCCGGCC GATC GGTCG-CGCCGCGCG GACAGGAGAGTTGCG TERM 180 349127 - 349171 + G 77 -15.6 -3.18264 | gap 1 CCGTTCACCGTCCAT CGCCAGGTGCCGC-CGGCGCG CGAT CGCGACGCGCGGCGGCTGGAG TTCATCCATCAGGAC Swit_0327 348746 - 349702 + | phytanoyl-CoA dioxygenase Swit_0328 349720 - 350538 + | short-chain dehydrogenase/reductase SDR Swit_0329 350535 - 351617 + | hypothetical protein TERM 181 352325 - 352269 - g 78 -17.2 -2.73875 | gap 2, opp_overlap 352299 TCGGGCGCAACATGA CCGGCGGCGCGGTGCTGGTCGAGCCGGC CAA GCCGAC-CGACCAGCTCGCCGCCGA-GG TGCGCGGGCAGATCG TERM 182 353620 - 353593 - g 70 -12.6 -3.34947 | CAAGAACGTCCAGAA GCAGGCCTCGTC GATC GACGCGGCCGGC AACGTCAACACGATC Swit_0330 351788 - 354121 + | TonB-dependent receptor TERM 183 354140 - 354167 + T 100 -16.3 -5.252 | overlap 354139 TTCGAAGCGGGAGAC TGGCGGCCGGT CTTCAC GCCGGCCGCCA TTTTTTGTGAGCCTC Swit_0331 355113 - 354181 - | short-chain dehydrogenase/reductase SDR TERM 184 355307 - 355286 - g 78 -13 -3.79747 | overlap 355274 TCAGCGACGAGGAAA GCCGTCGC ATCATG GCGACGGC GACGGACGTGCGGCC Swit_0332 355243 - 355476 + | hypothetical protein Swit_0333 356446 - 355496 - | short-chain dehydrogenase/reductase SDR Swit_0334 357327 - 356443 - | short-chain dehydrogenase/reductase SDR Swit_0335 358085 - 357327 - | short-chain dehydrogenase/reductase SDR Swit_0336 359446 - 358103 - | Rieske (2Fe-2S) domain-containing protein TERM 185 359169 - 359131 - G 73 -16.1 -2.53911 | gap 2, opp_overlap 359156 359157, overlap 359120 GGAAGCGGCAATGGA GCCGCGCGGCATGGCCG CAGCCCT CGGCCA-GCCG-GCGGC CGCGATGCTGGCAGG Swit_0337 359620 - 360417 + | short-chain dehydrogenase/reductase SDR Swit_0338 360431 - 361618 + | hypothetical protein Swit_0339 362069 - 361626 - | hypothetical protein Swit_0340 362866 - 362069 - | short-chain dehydrogenase/reductase SDR Swit_0341 363041 - 363949 + | enoyl-CoA hydratase Swit_0342 365287 - 364142 - | thiolase Swit_0343 365649 - 365290 - | hypothetical protein Swit_0344 366424 - 365654 - | enoyl-CoA hydratase Swit_0345 366611 - 367789 + | acetyl-CoA acetyltransferase Swit_0346 367912 - 368892 + | pyruvate dehydrogenase (acetyl-transferring) Swit_0347 368892 - 369896 + | transketolase, central region TERM 186 369942 - 369954 + G 75 -9.1 -4.18018 | TGTTGAGGTTCTGCT GCCGA AGC TCGGC TTTTCGATGAACGAG TERM 187 369969 - 370027 + G 72 -14.5 -2.89683 | opp_overlap 369966 369969 CTTTTCGATGAACGA G-GGCGTGCTCGCCGAATGGCTGGTCGCC GAC GGCGGCCAGGCGGTCGA-GGGCGCGCCGC TCTATGCGCTCGAAT TERM 188 370067 - 370051 - g 70 -8.7 -3.92522 | CTCGAATCCGAGAAA TCGACCC AGG AGGTCGA GAGCCCGGCGTCGGG Swit_0348 369922 - 370152 + | biotin/lipoyl attachment domain-containing protein TERM 189 370173 - 370207 + G 74 -14.3 -3.30441 | gap 1, opp_overlap 370153 370166, overlap 370174 CGCTACAAGCTGCAT GTCTCCTCGCGCGCCC TGCC GGGC-CGCGAGGAGGA TTATGACCGCTGGTA TERM 190 370174 - 370206 + G 77 -17.8 -2.5805 | gap 1, opp_overlap 370153 370166, overlap 370173 GCTACAAGCTGCATG TCTCCTCGCGCGCCC TGCC GGGC-CGCGAGGAGG ATTATGACCGCTGGT Swit_0349 370149 - 370451 + | hypothetical protein Swit_0350 370448 - 371356 + | alcohol dehydrogenase Swit_0351 372923 - 371400 - | AMP-dependent synthetase and ligase TERM 191 372349 - 372314 - G 78 -16.1 -3.00298 | opp_overlap 372303 372312 GCGCCGAATGATAGA GCGGGCCGGGGTTGA GCAGCG TCAGCCGCGGCCCGC GCCGGCATCCCTCCT Swit_0352 373818 - 372916 - | short-chain dehydrogenase/reductase SDR Swit_0353 375007 - 373835 - | hypothetical protein Swit_0354 375168 - 376061 + | transcriptional regulator TERM 192 376101 - 376132 + T 74 -13 -3.30124 | overlap 376102 ATATCCTCCATCCCC ACCGTCATTCCCGC GAAA GCGGGAATGACGAA TTCTAGCGGCTGCGG TERM 193 376102 - 376131 + T 80 -16.5 -2.57931 | overlap 376101 TATCCTCCATCCCCA CCGTCATTCCCGC GAAA GCGGGAATGACGA ATTCTAGCGGCTGCG Swit_0355 376680 - 376135 - | hypothetical protein Swit_0356 378436 - 376703 - | amidohydrolase 3 TERM 194 377416 - 377435 + g 82 -15 -3.40403 | GCTTGCGGAAGTCGG GGTCGCGC ATCC GCGCGACC TTCTGGTCGAGCGGC Swit_0357 379616 - 378507 - | epocide hydrolase domain-containing protein Swit_0358 380470 - 379622 - | metal-dependent hydrolase-like protein Swit_0359 381786 - 380491 - | cytochrome P450 Swit_0360 382395 - 381862 - | MarR family transcriptional regulator Swit_0361 383643 - 382423 - | cytochrome P450 Swit_0362 384658 - 383666 - | short-chain dehydrogenase/reductase SDR Swit_0363 384979 - 384662 - | ferredoxin Swit_0364 386225 - 384984 - | cytochrome P450 Swit_0365 386921 - 386280 - | TetR family transcriptional regulator Swit_0366 388557 - 386962 - | glucose-methanol-choline oxidoreductase TERM 195 387356 - 387393 + g 74 -14.9 -3.05384 | gap 1 GCATGGATCTGCGCG GGCTGGTT-CGGATCGGC CGA GGCGATCCGCACCCAGCC TTCGCTGCGCGACCG Swit_0367 389696 - 388554 - | beta-lactamase Swit_0368 389797 - 390543 + | enoyl-CoA hydratase/isomerase Swit_0369 390644 - 392632 + | NADH:flavin oxidoreductase/NADH oxidase Swit_0370 392626 - 393603 + | taurine catabolism dioxygenase TauD/TfdA Swit_0371 393722 - 394711 + | hypothetical protein Swit_0372 395946 - 394708 - | hypothetical protein Swit_0373 397154 - 395943 - | hypothetical protein Swit_0374 398089 - 397337 - | MarR family transcriptional regulator Swit_0375 399260 - 398133 - | acyl-CoA dehydrogenase domain-containing protein Swit_0376 400469 - 399270 - | acyl-CoA dehydrogenase domain-containing protein TERM 196 399424 - 399379 - G 74 -14.5 -3.01712 | gap 1 GTGCGGCCGGGAACA TGCTCGGCCCAGTCGGCGCTCG GCG CGGGCGC-GTCCGGGCCGGGCT CGTAATAGCGCAGCG TERM 197 399629 - 399675 + g 74 -15.9 -2.71364 | overlap 399631 GCGCGCGATAGGCGG GATCG-TCGCACACGCGCCGGCC GCC GGCCGTCTCGTG-GCGGGCGATC TCCTTGGCGCGCTCC Swit_0378 401363 - 402232 + | short-chain dehydrogenase/reductase SDR Swit_0379 404006 - 402321 - | glucose-methanol-choline oxidoreductase Swit_0380 404177 - 404977 + | short-chain dehydrogenase/reductase SDR Swit_0381 404987 - 407323 + | sulfatase TERM 198 407917 - 407975 + G 74 -12.4 -3.60627 | gap 3, opp_overlap 407919 GATCCTCGCCGAATG CATCGCGG-CGGCCGGCGTGC-CCGAGGG CGTC TTCTCGGTGCTCACC-GCCGACCGCGAGG TTTCCGATCACCTGA TERM 199 408424 - 408367 - g 70 -12.5 -3.39327 | gap 1, opp_overlap 408404 408418 CGGCTATATCGAGAA GGGCAAG-GCCGAGGGCGCCCGCCTC GTCACCG GCGGCGGGCGGCCGGCGCACCTGCCC AAGGGCTGGTTCGTC TERM 200 408404 - 408449 + G 74 -15.4 -3.01712 | gap 2, opp_overlap 408367, overlap 408418 CTCGTCACCGGCGGC GGG-CGGC-CGGCGCACCTGCC CAAG GGCTGGTTCGTCGAGCCGACCC TGTTCGCCGACGCGA Swit_0382 407327 - 408802 + | aldehyde dehydrogenase Swit_0383 408799 - 410172 + | major facilitator transporter Swit_0384 410169 - 411737 + | AMP-dependent synthetase and ligase Swit_0385 411743 - 412474 + | enoyl-CoA hydratase/isomerase Swit_0386 413606 - 412500 - | amidohydrolase 2 TERM 201 413888 - 413900 + H 74 -4.7 -4.564 | overlap 413889 CCGCGCGTGAAGGCG GGCCG AAA CGGCG TTTTCATTTGAGCTT Swit_0387 414166 - 414372 + | hypothetical protein TERM 202 414420 - 414381 - T 86 -13.6 -3.91897 | opp_overlap 414386 414387, overlap 414387 CGGCTGAGCGATAAA GGAAAAGCGCCACCAGCC CGAG GACCGATGGCGCCTTTGC CGTGCGAATCTGGAT TERM 203 414414 - 414387 - T 100 -13.4 -4.62475 | opp_overlap 414387 414386, overlap 414381 AGCGATAAAGGAAAA GCGCCACCAGCC CGAG GACCGATGGCGC CTTTGCCGTGCGAAT Swit_0388 415821 - 414445 - | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase Swit_0389 417054 - 415927 - | hypothetical protein TERM 204 417112 - 417128 + H 71 -10.8 -3.41693 | opp_overlap 417090 417091 417107 417106, overlap 417111 CAAGACAAATTTGGC CCGCGC CAAGC GCGCGG TTCATTGATCATGAA Swit_0390 417204 - 419606 + | ATP-dependent protease La TERM 205 419608 - 419647 + T 100 -25.1 -3.64822 | overlap 419609 CCGTCCGGCATTGAT AGCTCCCGTCGTCCCGG CTGCGA CCGGGACGACGGGAGCA TTTCCCTAGAGCCGT TERM 206 419609 - 419646 + T 100 -28.6 -2.78679 | overlap 419608 CGTCCGGCATTGATA GCTCCCGTCGTCCCGG CTGCGA CCGGGACGACGGGAGC ATTTCCCTAGAGCCG Swit_0392 420653 - 420225 - | hypothetical protein Swit_0393 421052 - 420705 - | hypothetical protein TERM 207 420895 - 420882 - G 72 -3.7 -4.62783 | overlap 420883 GAGCGAGTTGAAAAA GTGCG TGAA CGCGC CCTGCGCGACCTCCA Swit_0394 421661 - 421104 - | regulatory protein, LuxR TERM 208 421684 - 421654 - G 72 -3.2 -4.58395 | overlap 421656 421657 CTCATGGGGGAAAAA TACCGCATCGGC GCTTCAA GTCGATGCGAAA CTTGCCCGAAGCGCC Swit_0395 422258 - 421767 - | transcription elongation factor GreB Swit_0397 423443 - 423171 - | phosphotransferase system, phosphocarrier protein HPr Swit_0398 423847 - 423440 - | PTS system fructose subfamily IIA component TERM 209 423490 - 423521 + g 90 -18 -3.40163 | gap 1, opp_overlap 423485 CCGAGATATATTTGC GGCCGGCGTCG-CGC GCG GCGGCGACGGCGGCC TTGATCTTCATCATC TERM 210 423693 - 423720 + g 71 -10.5 -3.72968 | gap 1, overlap 423694 TCGTCGACGGCCTTC ACCGCGCGGGCG ATGTC CGCCCG-GCGGC TTTCCATGTCGTCGT Swit_0399 424808 - 423867 - | hypothetical protein Swit_0400 425254 - 424805 - | Hpr(Ser) kinase/phosphatase Swit_0401 426847 - 425258 - | integral membrane sensor signal transduction histidine kinase TERM 211 425635 - 425674 + g 77 -15.1 -3.1505 | gap 2 CGGTGCCGCGATGCG GGCGGGCG-AA-GGCGACG CGGA CGTCGCCGTTGCGCCCGCG TTCCTCGCGGGTGGT Swit_0402 427541 - 426834 - | two component transcriptional regulator TERM 212 427742 - 427697 - H 71 -6.2 -4.27886 | gap 2 TGGGAAAGATACAAA GGTGCG-GAGGATGCCG-GA CGATGGAT TCGCGGCATCGTCACGCGCC TAGACGTTAGGAGGG Swit_0403 427798 - 429396 + | phosphoenolpyruvate carboxykinase TERM 213 429425 - 429458 + F 95 -20.3 -3.35813 | overlap 429428 ATAAGCAGCTTTTCA GGAGGGCGCTCCGGC TTCG GTCGGGGCGCCCTTC TTGATTCGGGTGGAG TERM 214 429428 - 429455 + F 100 -18.4 -3.8186 | overlap 429425 AGCAGCTTTTCAGGA GGGCGCTCCGGC TTCG GTCGGGGCGCCC TTCTTGATTCGGGTG Swit_0404 429538 - 430674 + | diguanylate cyclase Swit_0405 430782 - 432239 + | inosine-5'-monophosphate dehydrogenase TERM 215 432290 - 432335 + G 72 -13.2 -3.14683 | gap 2, overlap 432306 GATCGAGCTGCTCGA CGGGATCGTCCGCGCGGCCCGC GAGG GCGGGGCG-GCGGCCGA-CACG TTGATCGCGCGCTAT Swit_0406 432246 - 433415 + | Fmu (Sun) domain-containing protein Swit_0407 433451 - 433984 + | TPR repeat-containing protein ksgA 434948 - 434118 - | dimethyladenosine transferase pdxA 435940 - 434945 - | 4-hydroxythreonine-4-phosphate dehydrogenase Swit_0410 437285 - 435945 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 216 436583 - 436641 + g 77 -15.2 -3.24747 | opp_overlap 436591 436592, overlap 436587 GCCGCGCATAGGCCG CGAAGGAAGCGCCACGGCGGACCTGATC GAT GATCCGCTCCGCATTGGCGTTGGCTTCG TTCATCGTCTCGGGC Swit_0411 439607 - 437361 - | organic solvent tolerance protein TERM 217 439760 - 439750 - H 80 -5.4 -4.88228 | AGCCAACACCAAAAA GGAA GAT TTCC CCGATGCGCATCAGC Swit_0412 439764 - 441233 + | leucyl aminopeptidase TERM 218 441252 - 441297 + T 100 -23.4 -3.05384 | gap 1 AGCGACGGCGCCATT CGGCCAGGTC-GGCGGGCG TATCGATGT CGCCCGCCAGGCCTGGCCG TTCGATGACCACGGC Swit_0413 441816 - 441235 - | hypothetical protein Swit_0414 442741 - 441818 - | LPPG:FO 2-phospho-L-lactate transferase TERM 219 442113 - 442067 - G 72 -14.3 -3.14132 | gap 1 CTGGCCGCCGATGAA GGGCGACACC-GCGACGATCGG GACG CCGCGCGCCGCCAGCGCCGCCC GGACGCCGGACAGGG Swit_0415 443508 - 442738 - | coenzyme F420-0 gamma-glutamyl ligase Swit_0416 443708 - 445114 + | cytochrome bd ubiquinol oxidase, subunit I Swit_0417 445111 - 446115 + | cytochrome d ubiquinol oxidase, subunit II Swit_0418 446344 - 447693 + | glutamate dehydrogenase Swit_0419 448857 - 447745 - | hypothetical protein Swit_0420 449528 - 448854 - | hypothetical protein Swit_0421 450474 - 449551 - | hypothetical protein TERM 220 449776 - 449810 + g 73 -10 -3.90291 | gap 1, overlap 449777 CGAGGCGCGATAGCC GCCGGCATCGTCGGC ATGGCC GTCG-CGATGCCGGG TTTCGTTGCCGCGCT Swit_0422 450649 - 451395 + | hypothetical protein Swit_0423 451732 - 451400 - | hypothetical protein TERM 221 451744 - 451717 - G 84 -10.4 -4.44797 | overlap 451718 451719 CGACGAAGATGAAAA GGCCGGCGCCCG GCAT CAGGCGACGGGC GGAGGCTGGCTCTCG Swit_0424 452151 - 451732 - | glutathione-dependent formaldehyde-activating, GFA Swit_0425 452813 - 452148 - | phosphoribosylformylglycinamidine synthase subunit I Swit_0426 453057 - 452827 - | phosphoribosylformylglycinamidine synthase, purS Swit_0427 453990 - 453127 - | ApbE family lipoprotein Swit_0428 454913 - 454086 - | hypothetical protein Swit_0429 455422 - 454925 - | periplasmic-like protein Swit_0430 456054 - 455419 - | PepSY-associated TM helix domain-containing protein TERM 222 456285 - 456335 + r 73 -12.8 -3.21099 | gap 2, opp_overlap 456271 456288, overlap 456281 456287 ACGACCGAGGATACC GA-AG-CGATGGCTCGCAATGGCT TCGGT ATCCATTGCGAGCCATCGACGATC TTACTGGTCGAGGAA TERM 223 456287 - 456332 + r 76 -15.6 -2.50016 | gap 1, opp_overlap 456271 456288, overlap 456281 456285 GACCGAGGATACCGA AG-CGATGGCTCGCAATGGCT TCGGT ATCCATTGCGAGCCATCGACG ATCTTACTGGTCGAG TERM 224 456330 - 456288 - R 93 -19.3 -3.14647 | opp_overlap 456281 456287 456285, overlap 456271 ACCGAGGATACCGAA GCGATGGCTCGCAATGGCT TCGGT ATCCATTGCGAGCCATCGA CGATCTTACTGGTCG Swit_0431 458360 - 456336 - | RNA polymerase sigma factor RpoD Swit_0432 460283 - 458412 - | DNA primase TERM 225 458878 - 458843 - G 72 -5.3 -4.46212 | gap 1, opp_overlap 458875, overlap 458863 TGTGCGACGAGAAAA GCGCCGGGA-AGCGGA GCAGA CCCGCCATCACCGCGC GGGTCACCATCGGAT TERM 226 459600 - 459627 + g 70 -12 -3.30124 | GAACAGCGGCGTGTC GGGCGAGTTCAG ATAT TTGGGCTCGCCC TTGTCGAGGATGCGC Swit_0433 460692 - 460294 - | hypothetical protein TERM 227 460696 - 460726 + r 75 -11.9 -3.56325 | gap 1, overlap 460715 460719 CGGGGAGCCCACCCC TCGATCCCCTCCCG CAGG CGGGAGGGGAG-GA TTGTCGTTCTCCGCC Swit_0434 461205 - 460753 - | GatB/Yqey domain-containing protein TERM 228 461126 - 461183 + g 77 -14.7 -3.22114 | gap 1, overlap 461127 461127 461163 ATCGCCGACTGGATC AGGCGGATCGCCGCCGTGGTGGTGGCGT CGC GCGCCTTCATCGCGGCGACGAG-CGCCG TCTTGATCTCGTCTC TERM 229 461127 - 461182 + g 77 -18.2 -2.52786 | gap 1, overlap 461126 461127 461163 TCGCCGACTGGATCA GGCGGATCGCCGCCGTGGTGGTGGCGT CGC GCGCCTTCATCGCGGCGACGAG-CGCC GTCTTGATCTCGTCT Swit_0435 461340 - 462518 + | carbamoyl phosphate synthase small subunit Swit_0436 462515 - 462928 + | hypothetical protein Swit_0437 463002 - 463364 + | hypothetical protein carB 463364 - 466696 + | carbamoyl phosphate synthase large subunit Swit_0439 466780 - 467256 + | transcription elongation factor GreA Swit_0440 467274 - 467903 + | rhomboid family protein Swit_0441 468227 - 468012 - | hypothetical protein TERM 230 468283 - 468319 + r 71 -11.5 -3.42274 | opp_overlap 468284 468287 468288, overlap 468276 468288 ACCATCTCCTGACGA AGAAGGGCGGTTCAGGA TAA TCCCGAACCGCCTTCCG TTCCTTCACTATTTT TERM 231 468318 - 468284 - R 89 -17.2 -3.14564 | opp_overlap 468283 468276 468288, overlap 468287 468288 CCATCTCCTGACGAA GAAGGGCGGTTCAGGA TAA TCCCGAACCGCCTTCC GTTCCTTCACTATTT TERM 232 468315 - 468287 - R 90 -15.3 -3.71848 | opp_overlap 468283 468276 468288, overlap 468284 468288 TCTCCTGACGAAGAA GGGCGGTTCAGGA TAA TCCCGAACCGCCT TCCGTTCCTTCACTA TERM 233 468314 - 468288 - R 91 -18.8 -2.82895 | opp_overlap 468283 468276 468288, overlap 468287 468284 CTCCTGACGAAGAAG GGCGGTTCAGGA TAA TCCCGAACCGCC TTCCGTTCCTTCACT TERM 234 468288 - 468314 + r 86 -16.6 -3.24166 | opp_overlap 468288 468287 468284, overlap 468283 468276 CTCCTGACGAAGAAG GGCGGTTCAGGA TAA TCCCGAACCGCC TTCCGTTCCTTCACT Swit_0442 468960 - 468364 - | toluene tolerance family protein Swit_0443 469493 - 469062 - | hypothetical protein TERM 235 469211 - 469233 + g 72 -13.4 -3.14132 | overlap 469203 469219 CGTCGCGCGCGGCGC TGACCGCGTC CTT GGCGCGGTCG TTGATCGCGCCGCCG Swit_0444 470230 - 469490 - | hypothetical protein Swit_0445 470866 - 470234 - | hypothetical protein Swit_0446 470988 - 472271 + | enolase TERM 236 472321 - 472370 + F 81 -16.3 -2.74012 | gap 1 GGGGACCGCCGTAGG CGGTGGAGGGGTGCCGCGCAGCGG CGT CTGCGCCGCCGC-CCCCTCCACCA TCCTTCGGATGGTCC purH 472481 - 474082 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Swit_0448 474138 - 475805 + | protein of unknown function DUF894, DitE Swit_0449 477317 - 475809 - | polysaccharide biosynthesis protein Swit_0450 480139 - 477314 - | DNA polymerase I Swit_0451 481546 - 480167 - | RND efflux system outer membrane lipoprotein Swit_0452 482673 - 481546 - | secretion protein HlyD family protein Swit_0453 484360 - 482675 - | hypothetical protein Swit_0454 486202 - 484418 - | sodium/hydrogen exchanger Swit_0455 486327 - 487952 + | potassium efflux system protein Swit_0456 487969 - 489171 + | hypothetical protein TERM 237 489186 - 489212 + T 80 -16.6 -2.62396 | opp_overlap 489186 GATGATAAAAGAAAA GGGCGCCATTCC AGT GGAATGACGCCC TGATCTCGGAAGGTG TERM 238 489212 - 489186 - T 100 -18.8 -5.20781 | opp_overlap 489186 GATGATAAAAGAAAA GGGCGCCATTCC AGT GGAATGACGCCC TGATCTCGGAAGGTG Swit_0457 490455 - 489235 - | isocitrate dehydrogenase Swit_0458 490581 - 491354 + | phosphatidylserine decarboxylase Swit_0459 491392 - 492189 + | CDP-diacylglycerol--serine O-phosphatidyltransferase rpsB 492597 - 493349 + | 30S ribosomal protein S2 TERM 239 493388 - 493408 + F 71 -11.1 -3.48276 | opp_overlap 493354 AGGCCGGGATCTCGC GGGTCGTGC CCG GCACGACGC TTCTGTGAGACCCCG TERM 240 493412 - 493443 + F 70 -12.2 -3.14132 | CCGGCACGACGCTTC TGTGAGACCCCGGC CCGC GCCGGGGTGACGCA TTCGTACGAAAGGAA tsf 493465 - 494388 + | elongation factor Ts TERM 241 494439 - 494402 - f 100 -22.8 -3.68073 | opp_overlap 494403, overlap 494403 GATCGGATCGAAGAA GGGCCCGCTCTTCCGG TGACGC CCGGAAGAGCGGGCCT TTTTTATGGGCGCTT TERM 242 494438 - 494403 - f 100 -26.3 -2.80522 | opp_overlap 494403, overlap 494402 ATCGGATCGAAGAAG GGCCCGCTCTTCCGG TGACGC CCGGAAGAGCGGGCC TTTTTTATGGGCGCT TERM 243 494403 - 494438 + F 100 -26.3 -5.24531 | opp_overlap 494403 494402 ATCGGATCGAAGAAG GGCCCGCTCTTCCGG TGACGC CCGGAAGAGCGGGCC TTTTTTATGGGCGCT Swit_0462 494519 - 495232 + | uridylate kinase Swit_0463 495245 - 495802 + | ribosome recycling factor Swit_0464 495799 - 496545 + | undecaprenyl pyrophosphate synthetase TERM 244 497140 - 497158 + G 76 -13.8 -3.42503 | overlap 497155 CGCGCTGGTCGCGCG GGCCGGCG GCC TGCCGGCC TTCTGCCTGTTCGCC Swit_0465 496550 - 497356 + | phosphatidate cytidylyltransferase Swit_0466 497353 - 498516 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Swit_0467 498513 - 499646 + | putative membrane-associated zinc metalloprotease Swit_0468 499717 - 502449 + | surface antigen (D15) Swit_0469 502449 - 503084 + | outer membrane chaperone Skp (OmpH) Swit_0470 503095 - 503568 + | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase TERM 245 503627 - 503647 + F 83 -6.8 -4.82901 | overlap 503628 CGCCGCTTCGCTTCC CGGCTGGT CGGAA ACCAGCCA TTTTTCTGGAGCCAG rpmE 503669 - 503899 + | 50S ribosomal protein L31 TERM 246 503923 - 503955 + F 83 -14.9 -3.53012 | overlap 503929 CCGAACATTCGGACG TGGATATGGCCGGGT ATC GCCCGGCCATTTTCA TTTCGGGGCACGGCA TERM 247 503929 - 503949 + F 100 -14.7 -4.54727 | overlap 503923 ATTCGGACGTGGATA TGGCCGGGT ATC GCCCGGCCA TTTTCATTTCGGGGC Swit_0472 503970 - 504329 + | hypothetical protein Swit_0473 505313 - 504387 - | beta-lactamase domain-containing protein Swit_0474 506269 - 505334 - | LysR family transcriptional regulator Swit_0475 506584 - 508626 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_0476 508639 - 510378 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_0477 510406 - 511737 + | major facilitator transporter Swit_0478 511850 - 514012 + | TonB-dependent receptor TERM 248 514014 - 514047 + F 78 -14.6 -3.09635 | gap 2 GCTACCGCTTCTGAC CGGCCGGGGCAGGGCG GCCG CGCCC-GCCCTG-CCG TTCCGTCCTCCCACT Swit_0479 514084 - 514788 + | dimethylmenaquinone methyltransferase Swit_0480 515640 - 514780 - | hypothetical protein Swit_0481 515889 - 517007 + | lytic murein transglycosylase Swit_0482 517004 - 517915 + | rare lipoprotein A TERM 249 519003 - 519039 + G 74 -12.3 -3.61715 | gap 1, opp_overlap 519000 GGTGCCGCAGAAGCT GCCGCTCGTCGCCGAC CAGGAC GTCGGC-ACGGCCGGC TTCTTCAACCGGATG Swit_0483 517912 - 519090 + | Serine-type D-Ala-D-Ala carboxypeptidase Swit_0484 519095 - 519721 + | thymidylate kinase Swit_0485 519718 - 520695 + | DNA polymerase III, delta prime subunit TERM 250 520978 - 520931 - g 75 -9.8 -4.09511 | gap 2, overlap 520921 520932 AACATGGCCTGAAAA TGGCCCAGGCGGCGCGCGCACG CGACAT CACGC-CGCGC-GCCTTGGCCG ATGAGATGTCCTCCT Swit_0486 520753 - 522324 + | methionyl-tRNA synthetase Swit_0487 522324 - 523100 + | TatD family hydrolase Swit_0488 523097 - 523861 + | beta-lactamase domain-containing protein Swit_0489 524774 - 524244 - | deaminase-reductase domain-containing protein Swit_0490 524919 - 526637 + | hypothetical protein Swit_0491 528429 - 526645 - | DNA mismatch repair protein MutL Swit_0492 528559 - 529599 + | rod shape-determining protein MreB Swit_0493 529616 - 530491 + | rod shape-determining protein MreC Swit_0494 530488 - 531000 + | hypothetical protein TERM 251 531657 - 531633 - g 100 -12.2 -4.7329 | gap 1 AAAACGATGGAAAAA TGGCTCCGCGG TAAG CCG-GGAGCCA AGCGGAGCGAGGTCA TERM 252 532642 - 532585 - g 74 -14.8 -3.02144 | gap 2, overlap 532558 TGATGGCGGGCAAGA CCGGCACGGCGCAGGTCCGCCGCATCAC CATG GCGATGCGCCGGGCC-G-GCCTCACCGG CACCGAGGGCATGCC Swit_0495 530997 - 532985 + | peptidoglycan glycosyltransferase Swit_0496 532982 - 534082 + | rod shape-determining protein RodA TERM 253 534953 - 535003 + G 73 -16 -2.62616 | TGACCGCGCTCGGCA CCGCGACGATCGGGCTCGAATG GGTCAAG CAGGCGGGCCCGCTCGACGCGG TGATCTGCCCGATCG Swit_0497 534451 - 535470 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Swit_0498 535643 - 536431 + | molybdopterin dehydrogenase, FAD-binding TERM 254 536450 - 536488 + G 78 -14.4 -3.56092 | opp_overlap 536436 ACTGCACCCTCAACG GCCGCGCTGTGACGGTCG AGG CGGCCGCCACGACCCGGC TTTCCGCGCTGCTCC Swit_0499 536425 - 536892 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Swit_0500 536889 - 539210 + | xanthine dehydrogenase, molybdenum binding subunit apoprotein Swit_0501 539227 - 539661 + | hypothetical protein Swit_0502 539821 - 542406 + | regulatory protein, LuxR Swit_0503 542637 - 543593 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Swit_0504 543641 - 544654 + | Rieske (2Fe-2S) domain-containing protein Swit_0505 544704 - 546845 + | TonB-dependent receptor TERM 255 546867 - 546909 + G 77 -15.5 -3.14132 | gap 1, overlap 546870 GCGGGCGGCCGTCGT CACGG-GGGCGTCGAGCGGC ATCG GCCGCGCGACGGCCGCCCTG TTGGTAGAACGCGGG TERM 256 546870 - 546907 + G 77 -15.6 -3.13403 | gap 2, overlap 546867 GGCGGCCGTCGTCAC GGG-GG-CGTCGAGCGGC ATCG GCCGCGCGACGGCCGCCC TGTTGGTAGAACGCG Swit_0506 546850 - 547695 + | short-chain dehydrogenase/reductase SDR Swit_0507 547709 - 548152 + | hypothetical protein alaS 550812 - 548149 - | alanyl-tRNA synthetase TERM 257 548676 - 548729 + g 71 -10.7 -3.5627 | gap 1 GGGTCAGCCATTGGC GCGCGGCCTCG-CCGGTCAGCGCCTC GAT GCGGCGCACGCCGCTCGACACCGCGC TTTCGGAGATGATCT Swit_0509 550934 - 551293 + | hypothetical protein Swit_0510 551929 - 551303 - | glutathione S-transferase domain-containing protein Swit_0511 552311 - 551964 - | glyoxalase/bleomycin resistance protein/dioxygenase recA 553549 - 552476 - | recombinase A Swit_0513 556108 - 553697 - | multi-sensor hybrid histidine kinase TERM 258 555418 - 555386 - G 74 -12 -3.54741 | gap 2, overlap 555387 CAGCAGCTCGGCAAA GGCCCAGCC--CGCGC TCG GCGCGTCGGCCGAGCC CAGCGCGCGCTGCAG TERM 259 556079 - 556134 + g 100 -22.7 -3.72576 | opp_overlap 556097 556099, overlap 556083 556099 GCCCGAGCTCGCGGA GATCGGGGCGGCGGAGAACA-GCGTGG CCAT CCGCGCTTGTTCTCCGCCGCCC-GTCC TTTCGTCAAGCGGGA TERM 260 556083 - 556131 + g 100 -27.6 -2.96695 | gap 1, opp_overlap 556097 556099, overlap 556079 556099 GAGCTCGCGGAGATC GGGGCGGCGGAGAACA-GCGTGG CCAT CCGCGCTTGTTCTCCGCCGCCCG TCCTTTCGTCAAGCG Swit_0514 558199 - 556154 - | endothelin-converting protein 1 Swit_0515 558833 - 558258 - | hypothetical protein smpB 559327 - 558845 - | SsrA-binding protein TERM 261 559264 - 559288 + g 70 -3.3 -4.51812 | overlap 559266 GGAAATAATCGAAGC GCGCCCGCCGG TTC TCGGCGACCAC TTTCTTCTTCTCGAA Swit_0517 560267 - 559389 - | dihydrodipicolinate synthase Swit_0518 560311 - 562359 + | lytic transglycosylase, catalytic TERM 262 562466 - 562439 - f 71 -5.4 -4.5032 | opp_overlap 562439 562438, overlap 562440 562442 562444 TACAGGAAGAAGAAA TGAGATCCCGGC TTTC GCCGGGATGACG GTTGCTTCTGAGAAA TERM 263 562461 - 562444 - f 73 -12.7 -3.14554 | opp_overlap 562439 562438, overlap 562442 562440 562439 GAAGAAGAAATGAGA TCCCGGC TTTC GCCGGGA TGACGGTTGCTTCTG Swit_0519 562655 - 564100 + | hypothetical protein Swit_0520 564100 - 565035 + | hypothetical protein Swit_0521 565037 - 565864 + | transglutaminase domain-containing protein Swit_0522 565939 - 567819 + | signal peptide peptidase SppA, 67K type TERM 264 567850 - 567823 - g 79 -14.9 -3.28712 | gap 1, opp_overlap 567839 GCGGTCCGCTGAGAA TCCGCG-CGGCG CGTCC CGCCGACGCGGA GGCGATCGCCGCGAT TERM 265 568297 - 568334 + G 72 -13.3 -3.14132 | TCTACCAGCTCGACC TGGGCGGGCATCCGGTG CCGC CGCCGGAGCCCCGTCCG TTCCTGCCCGCCGGC Swit_0523 567804 - 568352 + | GCN5-related N-acetyltransferase Swit_0524 569004 - 568357 - | hypothetical protein Swit_0525 569744 - 569118 - | hypothetical protein Swit_0526 569759 - 570832 + | arginine succinyltransferase TERM 266 571909 - 571865 - g 83 -15 -3.53811 | gap 2, opp_overlap 571902 TCGACGTGCGCGAAA GCATGCGCAACGGC-GGC-GGC CCC GCCTGCCTGCGGCTGCGCGTGC CGGTCGGCGAGGAAG Swit_0527 570829 - 572103 + | succinylarginine dihydrolase TERM 267 572395 - 572429 + G 100 -16.3 -4.05714 | opp_overlap 572386, overlap 572396 ATCGAAGGGCTCGGC GGCGTCCGCGCGGCG GTCGG CGTCGCGCGGCCGCA TTTCTCGTTCCGGGT TERM 268 572396 - 572428 + G 87 -19.8 -3.02946 | opp_overlap 572386, overlap 572395 TCGAAGGGCTCGGCG GCGTCCGCGCGGCG GTCGG CGTCGCGCGGCCGC ATTTCTCGTTCCGGG Swit_0528 572173 - 573177 + | arginine succinyltransferase Swit_0529 573177 - 574577 + | succinylglutamic semialdehyde dehydrogenase TERM 269 575138 - 575187 + G 77 -11.9 -3.93963 | CTCACCTACGAGCCC TCGTCGCTGCCCGACGGCACGCT CGCC GGCGCGCGGCCCGGCAGCGGCAA TTTCTCGATCATCGT TERM 270 575623 - 575678 + G 73 -16.1 -2.52464 | gap 2, opp_overlap 575593 575594 575623 575625 575626 575658 CTGCGACGGCAACAA CATCGCCGCCTGCGGCGTGCCCGTCGT CGAC ACGATGGGCGCG-CGC-GGCGGCGCCA TCCATTCCCCCGACG TERM 271 575678 - 575623 - g 85 -16.1 -3.65046 | gap 2, opp_overlap 575623, overlap 575593 575594 575625 575626 575658 CTGCGACGGCAACAA CATCGCCGCCTGCGGCGTGCCCGTCGT CGAC ACGATGGGCGCGC-GC-GGCGGCGCCA TCCATTCCCCCGACG TERM 272 575676 - 575625 - g 93 -18.7 -3.40611 | gap 2, opp_overlap 575623, overlap 575593 575594 575623 575626 575658 GCGACGGCAACAACA TCGCCGCCTGCGGCGTGCCCGTCGT CGAC ACGATGGGCGCGC-GC-GGCGGCGC CATCCATTCCCCCGA TERM 273 575675 - 575626 - g 86 -22.2 -2.64045 | gap 2, opp_overlap 575623, overlap 575593 575594 575625 575623 575658 CGACGGCAACAACAT CGCCGCCTGCGGCGTGCCCGTCGT CGAC ACGATGGGCGCGC-GC-GGCGGCG CCATCCATTCCCCCG Swit_0530 574574 - 575779 + | hypothetical protein Swit_0531 576934 - 575873 - | 3-phytase Swit_0532 579744 - 576934 - | TonB-dependent receptor TERM 274 579817 - 579800 - R 74 -9.1 -3.86202 | opp_overlap 579800 GCTGATGACAGCAAA GCGACGC ATGA GCGTCAC TTTCGTTTCATTATC Swit_0533 581221 - 579887 - | amidohydrolase Swit_0534 581358 - 583079 + | TPR repeat-containing protein Swit_0535 583114 - 585540 + | TonB-dependent receptor TERM 275 585585 - 585555 - g 85 -16.9 -3.54543 | gap 1 AGCGACGGTCCGAAA GT-GGGCGGCGGCA CGAC CGCCGCCGCCCGAC CGCTCGGGCTGGTCA Swit_0536 585537 - 586844 + | amino acid permease-associated region TERM 276 586843 - 586874 + T 82 -14.4 -3.32844 | opp_overlap 586832, overlap 586844 AGAAGCTCGCCTCAT GACGTCATCCCGGC CTCC GCCGGGATGACGGA TTGTGACCTCAGCCG TERM 277 586844 - 586873 + T 86 -17.9 -2.59564 | opp_overlap 586832, overlap 586843 GAAGCTCGCCTCATG ACGTCATCCCGGC CTCC GCCGGGATGACGG ATTGTGACCTCAGCC Swit_0537 588484 - 586883 - | FAD dependent oxidoreductase Swit_0538 589779 - 588481 - | Rieske (2Fe-2S) domain-containing protein Swit_0539 589862 - 591493 + | phosphoglucomutase TERM 278 591524 - 591499 - f 100 -14.7 -4.40804 | overlap 591500 GATCACCTGACAAAA TCCTCCCCGAG TTCA CTCGGGGAGGG GGACCACCCGAAGGG TERM 279 591523 - 591500 - f 91 -18.2 -3.24 | overlap 591499 ATCACCTGACAAAAT CCTCCCCGAG TTCA CTCGGGGAGG GGGACCACCCGAAGG TERM 280 593158 - 593114 - g 74 -15.6 -3.05384 | opp_overlap 593115 CTGTCGCGCACCGAA CGCGCGCCGGCCGCCGAGGA GCTGT TCGCCAACGGCCCGCACGCG GGCACCGAGGCGTTC TERM 281 593400 - 593445 + G 88 -15.3 -3.76224 | AGGCGACCGCCGATC TCGCCCAGCTCGGCGGCTTCG CGAT CAAGGCCGACGCGCTAGGCGA TTTCGTCCATGCGAA Swit_0540 591692 - 593791 + | TonB-dependent receptor TERM 282 593937 - 593982 + G 77 -14.7 -3.24747 | gap 1, overlap 593938 ACTCCTCACCGCCTT CCCGTTCCGGCTCGGCATCGCC TCG GGCGAT-CCGAGCCATGACGGC TTCGTGATCTGGACG TERM 283 593938 - 593981 + G 77 -18.2 -2.54634 | gap 1, overlap 593937 CTCCTCACCGCCTTC CCGTTCCGGCTCGGCATCGCC TCG GGCGAT-CCGAGCCATGACGG CTTCGTGATCTGGAC Swit_0541 593845 - 595392 + | alkaline phosphatase Swit_0542 597623 - 595563 - | cytochrome c biogenesis protein, transmembrane region TERM 284 595737 - 595782 + g 76 -13.9 -3.52539 | gap 1 CATCACCACGACGCC GGC-CCGGTCGAACGCCTCGCG CAC CGCGGGCCGCTCGATCGCCGCC TTCTCATTGACCTTG TERM 285 596357 - 596299 - G 73 -16.7 -2.53164 | overlap 596298 596325 GGAGGCAGCAGCAAC GCGGCGCCGACCGCGCCCGCCATG-AACG GGC CGCTGCACGGCGT-CGCCACCAGCGCCGC GAGCACGCCGGTCCA TERM 286 596571 - 596518 - G 74 -12.9 -3.66178 | overlap 596519 TCCTGCAACTGGAAA CCCCAGCCCGCCGCCGCGCCGCCCG CGCG CAGGCCGAGCAGCAGCAGCCCGAGA GCGACGCAGCTCAGC Swit_0543 598369 - 597665 - | hypothetical protein Swit_0544 598793 - 598407 - | hypothetical protein TERM 287 599220 - 599187 - R 86 -14 -3.91144 | gap 1, opp_overlap 599174, overlap 599190 TCGATATGCCAGAAA GGA-GGTTGGCCCTC TGCGG AAGGGCCAACCCTCC ATCGGTCAAAGCTTC TERM 288 599216 - 599190 - R 78 -14.5 -3.02186 | opp_overlap 599174, overlap 599187 ATATGCCAGAAAGGA GGTTGGCCCTC TGCGG AAGGGCCAACC CTCCATCGGTCAAAG Swit_0545 599405 - 599226 - | hypothetical protein TERM 289 599304 - 599328 + g 70 -12.1 -3.36694 | overlap 599302 CTGAGCGATGCCCTT GGCGACCAGGC CCG GCTTGTTCGCC TCTTTGCCGATCGAT Swit_0546 599628 - 601748 + | hypothetical protein Swit_0547 601940 - 602578 + | DNA-3-methyladenine glycosylase II Swit_0548 602585 - 603202 + | hypothetical protein Swit_0549 603195 - 603839 + | DNA-N1-methyladenine dioxygenase TERM 290 604386 - 604337 - g 74 -11.9 -3.73775 | opp_overlap 604385 TCTACCCGGACGAAA GCCGTTTCCGCAGCCGGGTCGTC ATGG GCCGGCACGGCTTCGGCAAGGGC GAATATCGCTATTTC Swit_0550 604144 - 604905 + | hypothetical protein Swit_0551 604919 - 605428 + | methylated-DNA--protein-cysteine methyltransferase Swit_0552 606406 - 605642 - | PEP phosphonomutase and related enzyme-like protein Swit_0553 607683 - 606511 - | major facilitator transporter Swit_0554 607807 - 608712 + | LysR family transcriptional regulator TERM 291 608977 - 608947 - g 76 -13.3 -3.50853 | gap 2, opp_overlap 608967 CTGGGCGAACGACAA GGCCCGCGCCGACGC CGC GCG-CGGCG-GGACC GACAAGCTGGTCGGC TERM 292 609042 - 609026 - g 70 -9.3 -3.85698 | TTCCGGCTGCAGAAA CCGGGCC TGT GGCGCGG CAAGGTGTTCGTCCC Swit_0555 608771 - 609181 + | hypothetical protein Swit_0556 609657 - 609187 - | hypothetical protein Swit_0557 610481 - 609654 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 293 609902 - 609876 - G 72 -13.7 -3.21099 | GGCGGCGACGACGAA CGCGCCCGC CTCGATCGC GCGGGCGCG CAGCAGCACATGCCA Swit_0558 610751 - 610485 - | glutaredoxin 3 Swit_0559 611538 - 610792 - | phosphoribosyltransferase Swit_0560 611551 - 612468 + | methyltransferase type 11 Swit_0561 612800 - 614341 + | 2-isopropylmalate synthase Swit_0562 614480 - 615466 + | hypothetical protein Swit_0563 616274 - 615519 - | oxidoreductase, molybdopterin binding Swit_0564 617113 - 616271 - | thiosulfate reductase cytochrome B subunit (membrane anchoring protein)-like protein TERM 294 616754 - 616740 - G 72 -5.6 -4.45738 | overlap 616741 CAGGCGAAGAAGAAA TGCCAG ATG CGGGCA TCGGCGAGGCTGTAG TERM 295 617301 - 617273 - g 73 -10.3 -3.84648 | gap 1, opp_overlap 617280 GTGAACAGGAGGAAA GCGACGCGCGCC GCCACG GGCGC-CATCGC ATCATGCTCGCCGCG Swit_0565 617245 - 617565 + | type IV pilus assembly PilZ hrcA 618618 - 617590 - | heat-inducible transcription repressor Swit_0567 618733 - 619449 + | RNAse PH TERM 296 619548 - 619514 - g 77 -11.3 -3.8211 | CGCCAGCCACAACAA GGGCAAGCTGCGCGA GATCG CCGAGCTGCTCGCCC CGCACGGGATCGAGA Swit_0568 619446 - 620075 + | Ham1 family protein TERM 297 620109 - 620087 - f 72 -13.4 -2.68778 | overlap 620086 620084 CTAGAACCGAAAGAT TCCCCTCCCT GCA AGGGAGGGGT GTAGGGGTGGGTAAC TERM 298 620152 - 620128 - f 87 -18.6 -2.52464 | GGGGTGGGTAACGGA GCCGAGGGGC TCGAC GCCCCTCGGC GGAGTTCGACGGAAC Swit_0569 620169 - 621362 + | coproporphyrinogen III oxidase Swit_0570 622991 - 621807 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 299 622626 - 622681 + g 74 -15.9 -2.81464 | gap 1, opp_overlap 622613 622626 622628 CAGCGGGCCGAGGAA CAGCCGGTTGC-CGTCCGCCACCGCG CGATT CGCGGCGGCGGCCGCGCCGGCGGCGG TGTCATAGGTGGTCA TERM 300 622678 - 622626 - G 80 -16.9 -3.14344 | gap 2, opp_overlap 622626, overlap 622613 622628 CAGCGGGCCGAGGAA CAGCCGGTTGCCGTCCGCCACCGCG CGATT CGCGGCGGCGG-CCGCG-CCGGCGG CGGTGTCATAGGTGG TERM 301 622676 - 622628 - G 85 -18.1 -3.13403 | gap 2, opp_overlap 622626, overlap 622613 622626 GCGGGCCGAGGAACA GCCGGTTGCCGTCCGCCACCGCG CGATT CGCGGCGGCGG-CCGCG-CCGGC GGCGGTGTCATAGGT Swit_0571 623004 - 623885 + | uroporphyrin-III C/tetrapyrrole methyltransferase Swit_0572 623882 - 624238 + | hypothetical protein TERM 302 624240 - 624263 + F 75 -12.4 -3.61398 | opp_overlap 624239 624256 624259, overlap 624241 GGCACGGCCAATGAC TCCCCTCCCT TGAA AGGGAGGGGC TTATTCCCCCGCGCC TERM 303 624241 - 624262 + F 78 -15.9 -2.76696 | opp_overlap 624239 624256 624259, overlap 624240 GCACGGCCAATGACT CCCCTCCCT TGAA AGGGAGGGG CTTATTCCCCCGCGC Swit_0573 624338 - 625285 + | glutathione synthetase Swit_0574 625290 - 625889 + | SNARE associated Golgi protein Swit_0575 626360 - 625896 - | hypothetical protein Swit_0576 626813 - 626409 - | MerR family transcriptional regulator Swit_0577 627342 - 626968 - | phosphoribosyl-AMP cyclohydrolase Swit_0578 627486 - 628946 + | amidophosphoribosyltransferase Swit_0579 628969 - 629679 + | short-chain dehydrogenase/reductase SDR Swit_0580 631018 - 629738 - | cyclopropane-fatty-acyl-phospholipid synthase Swit_0581 631620 - 631147 - | hypothetical protein TERM 304 631314 - 631333 + g 75 -9.2 -4.11216 | overlap 631325 GCAGCGCCTCTTCGC GCCGGAGC AGCG GCTCCAGC TTTTCGACGTCGACG Swit_0582 632264 - 631644 - | GTP cyclohydrolase Swit_0583 632900 - 632325 - | cytochrome B561 Swit_0584 633024 - 634469 + | glycosyl transferase family protein TERM 305 634779 - 634743 - g 77 -14.6 -3.15544 | gap 1 CGGCACGGTGATCAA GTCGATCCGCCTGACCG GCGA CGATCAGG-AGATCGAC TGCCGCTTCGAAGGC Swit_0585 634540 - 634839 + | alkylphosphonate utilization operon protein PhnA TERM 306 634876 - 634926 + T 70 -9.9 -3.53811 | gap 1, opp_overlap 634876 634915 634918, overlap 634875 GTCATCCCGGCGAAA GCCGGGATCTCCCTGCCTTTCT CCGGCCCA AGAAAGA-AGTGAGATCCTGGC TTTCGCCAGGATGAC TERM 307 634926 - 634876 - T 70 -10.6 -3.53811 | gap 1, opp_overlap 634875 634876, overlap 634915 634918 GTCATCCCGGCGAAA GCCGGGATCTCCCTGCCTTTCTC CGGCCC AAGAAAGA-AGTGAGATCCTGGC TTTCGCCAGGATGAC Swit_0586 635906 - 634953 - | homoserine O-succinyltransferase Swit_0587 636968 - 636099 - | metallophosphoesterase Swit_0588 638920 - 637097 - | hypothetical protein Swit_0589 639809 - 638931 - | hypothetical protein Swit_0590 642214 - 639809 - | cyclic nucleotide-binding protein TERM 308 642103 - 642066 - G 74 -12.8 -3.64703 | gap 2, opp_overlap 642098, overlap 642067 TTGCCCGCATCGAAA TCGACGTCCGAGCGCAGC ACGA GCTG-GCTCGG-CGTCGC CATGACGTGCTTGCC TERM 309 642102 - 642067 - G 74 -16.3 -2.78679 | gap 2, opp_overlap 642098, overlap 642066 TGCCCGCATCGAAAT CGACGTCCGAGCGCAGC ACGA GCTG-GCTCGG-CGTCG CCATGACGTGCTTGC Swit_0591 642456 - 643430 + | TPR repeat-containing protein TERM 310 643452 - 643493 + T 100 -20.9 -3.55563 | TCCTGCCGCCCTGTC CCTCTTCCGTCATCCCGGC GGAG GCCGGGATCTCGGGAGAGG TTTGCACCCTCACCT TERM 311 643545 - 643570 + T 93 -16.1 -3.81414 | opp_overlap 643546, overlap 643546 GGGGTGACGCAAAAA AGGCCGCCGGA TCGC TCCGGCGGCCC TTCTTCGTTCGGGAT TERM 312 643569 - 643546 - T 100 -19.6 -5.08824 | opp_overlap 643545 643546 GGGTGACGCAAAAAA GGCCGCCGGA TCGC TCCGGCGGCC CTTCTTCGTTCGGGA TERM 313 643546 - 643569 + T 93 -19.6 -2.88366 | opp_overlap 643546, overlap 643545 GGGTGACGCAAAAAA GGCCGCCGGA TCGC TCCGGCGGCC CTTCTTCGTTCGGGA TERM 314 643600 - 643618 + T 86 -8.1 -4.61824 | gap 1, overlap 643598 643600 TATCCTATCGGATCA GGC-GGCG TCGC CGCCGGCC TTTTCCTTGTTCTTC clpX 644871 - 643597 - | ATP-dependent protease ATP-binding subunit TERM 315 644541 - 644581 + g 73 -13.1 -3.48684 | overlap 644542 644553 GGATGTTCGACTTGG CCAGCTCGACATCGGCGCC CTT GGCGCCGTGGTTGAGCCGC TTGTAATGGTTGTGC TERM 316 644542 - 644580 + g 74 -16.6 -2.68729 | overlap 644541 644553 GATGTTCGACTTGGC CAGCTCGACATCGGCGCC CTT GGCGCCGTGGTTGAGCCG CTTGTAATGGTTGTG TERM 317 644553 - 644569 + g 70 -15.1 -2.71681 | overlap 644542 644541 TGGCCAGCTCGACAT CGGCGCC CTT GGCGCCG TGGTTGAGCCGCTTG TERM 318 644963 - 644988 + r 86 -11.9 -4.11216 | opp_overlap 644956 644957 GCGATGAAGGCCAAG CGGGTTCCCAT CGAT ATGGGAAGCCG TTTTCCGGGTGCAAC TERM 319 645091 - 645062 - R 86 -12.7 -4.07568 | CCGCGCCGCGGAAAA CCGCGCGACTCGG CCGG CCGCGACGCGCAG GACGCGCCCTCCCCG TERM 320 645139 - 645191 + r 71 -13.4 -2.57344 | overlap 645138 CCCAGGCGTCGGCCA TG-CCGGGCGCCGGCCGATCAGGCGG CGA TCGCCTCGTCGGCGGG-GCTCGGACG CTTGTCGAACACCTC Swit_0593 645812 - 645156 - | endopeptidase Clp TERM 321 645973 - 645937 - R 100 -21 -3.90318 | gap 1, overlap 645940 GGAGGATCGGAGAAA GCAGAAGGGCCGCCGGA TCGC TCCGACGGCCCTTC-GC GAATGGATCGAAGAC TERM 322 645971 - 645940 - R 100 -22.4 -3.01918 | overlap 645937 GGATCGGAGAAAGCA GAAGGGCCGCCGGA TCGC TCCGACGGCCCTTC GCGAATGGATCGAAG tig 647651 - 645996 - | trigger factor TERM 323 648066 - 648008 - RH 72 -13.9 -2.72144 | opp_overlap 648008 648042, overlap 648007 TCATTCCCGCGAAAG CGGGAATCCACGGTC-ACGGCACGTCCAA CCT CTTG-CGGGCCGCCGTCCATGGATTCCCG CTTTCGCGGGAATGA Swit_0595 651267 - 648127 - | hypothetical protein TERM 324 650695 - 650677 - Gg 72 -13.8 -3.21099 | GCCGTCGATCAGGAA GGCGAGCG TCC CGCCCGCC CCCGCCGGATCGTCG gatB 652922 - 651438 - | aspartyl/glutamyl-tRNA amidotransferase subunit B Swit_0596 648679 - 651969 + | hypothetical protein gatA 654406 - 652919 - | aspartyl/glutamyl-tRNA amidotransferase subunit A Swit_0599 654693 - 654406 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C TERM 325 654859 - 654881 + H 71 -13.4 -2.59742 | opp_overlap 654853, overlap 654858 CGTAACCCACCCCTA GCCCCTCCCT GGC AGGGAGGGGG ATTATGCGGGTTGGC TERM 326 655088 - 655131 + G 82 -15.8 -3.28712 | overlap 655089 CGCTTCGCCTTCGTG CCGGGCGTCCGCTTCGACGC CGAT GCGGCGGGGCCGGCGCCCGA TTATGCGCGGCCGGC TERM 327 655089 - 655130 + G 79 -19.3 -2.57132 | overlap 655088 GCTTCGCCTTCGTGC CGGGCGTCCGCTTCGACGC CGAT GCGGCGGGGCCGGCGCCCG ATTATGCGCGGCCGG TERM 328 655651 - 655703 + G 70 -14.8 -2.78463 | gap 2 GACCACGGCGGACGT GCCCGCGCTCGGCCT-GCCC-GCCTG CAC CGGGCCGGGCCAGGCCCAGTGCCTGC TGTCGTGGCAGAGCT Swit_0600 654977 - 656092 + | hypothetical protein Swit_0601 656089 - 656544 + | Holliday junction resolvase YqgF TERM 329 656598 - 656568 - f 100 -5.5 -5.45726 | gap 1, overlap 656572 CAGACCGGAAAAAAA GGGAT-ATCCTGAC TTTC GTCAGGATGACGCC TGGTAAGCATCAACC TERM 330 656629 - 656651 + F 76 -10.5 -3.83502 | overlap 656630 CCGCTTGAGCTTCGC CCCGCGCTG GCCTA CAGCGCGGC TTTAATGTCCGCATC TERM 331 656630 - 656650 + F 74 -14 -2.8978 | overlap 656629 CGCTTGAGCTTCGCC CCGCGCTG GCCTA CAGCGCGG CTTTAATGTCCGCAT pyrB 656656 - 657606 + | aspartate carbamoyltransferase catalytic subunit Swit_0603 657603 - 658832 + | dihydroorotase Swit_0604 660028 - 658835 - | sporulation domain-containing protein TERM 332 660750 - 660700 - g 81 -19.1 -2.82193 | gap 1, overlap 660703 AGCAGATGGACCAGA TCATCCCGCAGGAGCAGCGCGAGG CCGG CCTCGCCCT-CTCCCGCGAGATGG AGCGGACCGCGCAGC TERM 333 660747 - 660703 - g 79 -19.4 -2.67143 | gap 1, overlap 660700 AGATGGACCAGATCA TCCCGCAGGAGCAGCGCGAGG CCGG CCTCGCCCT-CTCCCGCGAGA TGGAGCGGACCGCGC TERM 334 661065 - 661094 + G 72 -8.5 -4.07568 | gap 1, overlap 661066 ATCGTCGCGTCACCG AGCGGCG-GCTGGA AGA TCCAGCTCGGCGCC TTTTCGAGCGCCGAC Swit_0605 660201 - 661295 + | sporulation domain-containing protein Swit_0606 661416 - 661700 + | hypothetical protein Swit_0607 662580 - 661702 - | phosphoserine phosphatase Swit_0608 662645 - 663517 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 335 664282 - 664239 - g 77 -14.5 -3.21099 | gap 1, overlap 664240 CGGCGGCATCATCAA TGCGGGCCCGCTCGC-CAGC CAGGT GCTGCGCGAGCTGGCGCGCG TCACCGGGGCGCCGG TERM 336 664281 - 664240 - g 77 -18 -2.52516 | gap 1, overlap 664239 GGCGGCATCATCAAT GCGGGCCCGCTCGC-CAGC CAGGT GCTGCGCGAGCTGGCGCGC GTCACCGGGGCGCCG TERM 337 664572 - 664524 - g 78 -12.4 -3.71848 | gap 1, overlap 664491 664526 CTCGTCGATCAACAA GATCGTGCGCGCCGACATCGGCA TCGT CGGCGACGTCGGC-CGCGCGATG GAGGACATGGTCAAG TERM 338 664570 - 664526 - g 82 -15 -3.44284 | gap 1, overlap 664491 664524 CGTCGATCAACAAGA TCGTGCGCGCCGACATCGGCA TCGT CGGCGACGTCGGC-CGCGCGA TGGAGGACATGGTCA Swit_0609 663580 - 665334 + | acetolactate synthase, large subunit ilvH 665377 - 665892 + | acetolactate synthase 3 regulatory subunit TERM 339 665930 - 665908 - f 76 -10.5 -3.89346 | GGGCGAGGCGATAAA GCAGGCTCG ACGGA CGGGCCTGC GCCCGTTAACGGGGC Swit_0611 666017 - 667036 + | ketol-acid reductoisomerase TERM 340 667087 - 667120 + F 91 -21.1 -2.62184 | opp_overlap 667079, overlap 667091 GAATAGACGGTTGTC GAAGGGGCGGCAGGC GCTA GTCTGCCGCCCTTTC TCATATGGGAGACGA TERM 341 667091 - 667116 + F 100 -18.3 -4.0162 | opp_overlap 667079, overlap 667087 AGACGGTTGTCGAAG GGGCGGCAGGC GCTA GTCTGCCGCCC TTTCTCATATGGGAG Swit_0612 667138 - 667755 + | YceI family protein TERM 342 668448 - 668400 - g 85 -17.5 -3.1855 | CCGGCGAAGATCGAA GCCGCCGCCGCCATG-CTCCGGC AGGCG GCCGAAGGCACCGCGGCGGC-GC AGGACGATGGCGCAC Swit_0613 667818 - 668837 + | hypothetical protein Swit_0614 669249 - 668842 - | NUDIX hydrolase Swit_0615 669353 - 669538 + | Flp/Fap pilin component Swit_0616 669652 - 669819 + | Flp/Fap pilin component TERM 343 669851 - 669883 + T 100 -22.8 -3.05022 | overlap 669855 GCTTAGGCTGGCTTC GAGAGGGCGGCGGG GACAA CCCGCCGCCCTTTC TGTATGTGTCCAACC TERM 344 669855 - 669879 + T 100 -20 -4.19483 | overlap 669851 AGGCTGGCTTCGAGA GGGCGGCGGG GACAA CCCGCCGCCC TTTCTGTATGTGTCC Swit_0617 671467 - 670028 - | peptidase M48, Ste24p TERM 345 671695 - 671674 - R 80 -5.7 -4.75219 | overlap 671678 GAATGACGAAGAAAA TGCAGGGCC GTGG GGCCCGTCA GCCGATGGCGAGGAA TERM 346 671714 - 671744 + r 77 -13.3 -3.61398 | gap 2, opp_overlap 671711, overlap 671736 GATGGCGAGGAACTT GTCG-CGGCGC-GCG GCG CGCAGCGCCGTCGGC TTCTTGCCGGCCAGC Swit_0618 672634 - 671693 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha Swit_0619 672812 - 673342 + | heat shock protein Hsp20 TERM 347 673359 - 673386 + F 86 -17.8 -2.82623 | opp_overlap 673363, overlap 673363 TCGCGACGGGCAGAG GAAAGCCGGGCC GCAA GGTCCGGCTTTC TGATTCTCGCAAGAG TERM 348 673363 - 673382 + F 86 -12.8 -4.1021 | opp_overlap 673363, overlap 673359 GACGGGCAGAGGAAA GCCGGGCC GCAA GGTCCGGC TTTCTGATTCTCGCA TERM 349 673382 - 673363 - f 76 -10.6 -3.83502 | opp_overlap 673363 673359 GACGGGCAGAGGAAA GCCGGGCC GCAA GGTCCGGC TTTCTGATTCTCGCA TERM 350 673625 - 673645 + F 91 -9.6 -4.59773 | CCCGCGAACCATGCA GGGGCGCC TTCCC GGCGGCCC TTTTTGCGCATGGCC Swit_0620 673688 - 674242 + | F0F1 ATP synthase subunit delta Swit_0621 674245 - 675774 + | F0F1 ATP synthase subunit alpha Swit_0622 675835 - 676719 + | F0F1 ATP synthase subunit gamma Swit_0623 676744 - 678198 + | F0F1 ATP synthase subunit beta Swit_0624 678245 - 678508 + | F0F1 ATP synthase subunit epsilon TERM 351 678540 - 678566 + T 100 -15.9 -4.46926 | gap 1, opp_overlap 678540 CAAGACACAGGACAA GGCCCGG-CGCA GCGA TGCGACCGGGCC TTTTCTAATAGCATC TERM 352 678566 - 678540 - T 85 -15.9 -3.52307 | gap 1, opp_overlap 678540 CAAGACACAGGACAA GGCCCGG-CGCA GCGA TGCGACCGGGCC TTTTCTAATAGCATC Swit_0625 679037 - 678684 - | ArsR family transcriptional regulator Swit_0626 679464 - 679006 - | activator of Hsp90 ATPase 1 family protein TERM 353 679817 - 679791 - g 71 -11.4 -3.60006 | overlap 679783 679792 AACTACACCGCCAAA TTCGGCGCCGGC ACG GCCGGCACCGGC GCCACGATCAGCTAT TERM 354 679816 - 679792 - g 70 -14.9 -2.75521 | overlap 679783 679791 ACTACACCGCCAAAT TCGGCGCCGGC ACG GCCGGCACCGG CGCCACGATCAGCTA TERM 355 680371 - 680329 - g 74 -14.9 -3.05844 | gap 1 TGCTCTATCGCAACA CGCCGG-TCACGCCGATGCC GCTC GACATCGTCGCGATCCAGCG GATCTACGGGGTCGC Swit_0627 679644 - 681464 + | peptidase M10, serralysin-like protein Swit_0628 681560 - 683125 + | type II secretion system protein E Swit_0629 683389 - 684192 + | methyltransferase-like protein Swit_0630 684892 - 684332 - | polyhydroxyalkonate synthesis repressor, PhaR Swit_0631 684913 - 685980 + | Poly(3-hydroxyalkanoate) synthetase-like protein Swit_0632 686071 - 687243 + | acetyl-CoA acetyltransferase TERM 356 687251 - 687295 + F 100 -22.2 -4.2803 | gap 1, overlap 687252 687282 687284 AACGCTGATCGACAC CGTCGC-GCCCGCCTTTCCCG GCCT CGGGGAAGGCGGGCCGCGGCC TTTTCGCTTCCCGTC TERM 357 687252 - 687294 + F 100 -25.7 -3.16336 | gap 1, overlap 687251 687282 687284 ACGCTGATCGACACC GTCGC-GCCCGCCTTTCCCG GCCT CGGGGAAGGCGGGCCGCGGC CTTTTCGCTTCCCGT Swit_0633 687372 - 687761 + | hypothetical protein Swit_0634 688158 - 688355 + | hypothetical protein TERM 358 688378 - 688395 + T 76 -14.1 -3.14468 | TGGCCCTCGCCGGGC GCCGGGC ATCC GCCCGGC TTGGCTATCCTCGCA TERM 359 688602 - 688581 - T 100 -5.8 -5.45652 | AGGCCCAATAAAAAA GCCGGG CTCTATTCTT CCCGGC TGACCTTCTCGTTGC Swit_0635 689056 - 688589 - | TraR/DksA family transcriptional regulator TERM 360 689139 - 689181 + r 91 -9.7 -4.63542 | gap 1, opp_overlap 689143, overlap 689140 GCGCCTATAGACAGC ACAACGCCCGCACACAAGCC GACA GGCT-GTGCGCGGGCGCAGA TTTTTGGGGATTATC TERM 361 689140 - 689180 + r 74 -13.2 -3.37402 | gap 1, opp_overlap 689143, overlap 689139 CGCCTATAGACAGCA CAACGCCCGCACACAAGCC GACA GGCT-GTGCGCGGGCGCAG ATTTTTGGGGATTAT TERM 362 689177 - 689143 - R 100 -20.1 -3.51235 | gap 1, opp_overlap 689140 689139 CTATAGACAGCACAA CGCCCGCACACAAGCC GACA GGCT-GTGCGCGGGCG CAGATTTTTGGGGAT Swit_0636 689926 - 689192 - | hypothetical protein TERM 363 689799 - 689821 + g 75 -5.5 -4.65895 | CACCTATTGACGCCC GGATGGAGC CGCCT GTTCCACCC TTTTTCGGTCAGCCG Swit_0637 689952 - 691229 + | seryl-tRNA synthetase Swit_0638 691226 - 691990 + | 3'-nucleotidase / 5'-nucleotidase / exopolyphosphatase Swit_0639 692040 - 693224 + | peptidase M23B Swit_0640 694935 - 693190 - | sulphate transporter Swit_0641 695204 - 694932 - | XRE family transcriptional regulator TERM 364 695182 - 695168 - G 75 -8.5 -4.11216 | GGTCGATTCCCAAAA GGGCC CTGGC GGCCC GCATCTGCGCGGCGG Swit_0642 695323 - 696681 + | MiaB-like tRNA modifying enzyme YliG Swit_0643 697692 - 696694 - | mandelate racemase/muconate lactonizing protein Swit_0644 699224 - 697692 - | tetratricopeptide TPR_4 TERM 365 697760 - 697781 + g 75 -5.1 -4.56597 | gap 1, opp_overlap 697758 697772, overlap 697759 697775 CGCCGGGCCAATAGG CGCGCGGC AATATCC GCC-CGCG TTTTTCGAACGCGGC Swit_0645 700434 - 699214 - | polyhydroxyalkanoate depolymerase, intracellular Swit_0646 700563 - 702341 + | lipid ABC transporter ATPase/inner membrane protein TERM 366 702376 - 702349 - T 100 -17.8 -4.21194 | CGGCATGATCGAAAA TCCCCCCTCCCT TTCC AGGGAGGGGAGA TCAGAGCTCAGACCC Swit_0647 703274 - 702384 - | 3-hydroxyisobutyrate dehydrogenase Swit_0648 704053 - 703280 - | short chain enoyl-CoA hydratase Swit_0649 705129 - 704065 - | enoyl-CoA hydratase/isomerase Swit_0650 706271 - 705126 - | acyl-CoA dehydrogenase domain-containing protein Swit_0651 706298 - 706645 + | excinuclease ABC subunit C Swit_0652 708213 - 706705 - | methylmalonate-semialdehyde dehydrogenase [acylating] Swit_0653 708278 - 709255 + | LysR family transcriptional regulator Swit_0654 709371 - 710114 + | CRP/FNR family transcriptional regulator Swit_0655 710120 - 710452 + | hypothetical protein Swit_0656 710766 - 710482 - | hypothetical protein TERM 367 710969 - 710933 - R 100 -18.2 -5.055 | gap 1, overlap 710936 GGAATCCCGAAAAAA GA-AGGACCCGGAAGCT ATGG AGCTTCCGGGTCCCGTC CGAACCGCATCAGGT TERM 368 710965 - 710936 - R 100 -22.3 -4.62085 | overlap 710933 ATCCCGAAAAAAGAA GGACCCGGAAGCT ATGG AGCTTCCGGGTCC CGTCCGAACCGCATC Swit_0657 715521 - 710992 - | glutamate synthase (NADPH) large subunit Swit_0658 716076 - 715531 - | hypothetical protein Swit_0659 717530 - 716073 - | putative oxidoreductase Swit_0660 718494 - 717694 - | undecaprenyl-diphosphatase Swit_0661 719441 - 718503 - | NADH dehydrogenase TERM 369 719967 - 719949 - g 71 -3 -4.62168 | overlap 719941 719951 AGGGAAAGCAGAAAA CACTGCAC CTG GGGCATTG GCCCAAGGTGGGGAT TERM 370 720632 - 720609 - g 86 -6 -5.00616 | gap 1, opp_overlap 720615, overlap 720615 720616 TCCCGCCCGAAAAAA CCAAAATGCGG CGC CCGCA-TTGGG TGCCGCTGTCGCGGC TERM 371 720627 - 720615 - g 91 -9.1 -4.86862 | opp_overlap 720615, overlap 720609 720616 CCGAAAAAACCAAAA TGCGG CGC CCGCA TTGGGTGCCGCTGTC Swit_0662 719801 - 721054 + | phage integrase family protein Swit_0663 721241 - 721026 - | DNA binding domain-containing protein Swit_0665 722008 - 723318 + | FAD dependent oxidoreductase Swit_0666 723572 - 723336 - | biotin/lipoyl attachment domain-containing protein Swit_0667 724621 - 723569 - | transketolase, central region TERM 372 724391 - 724334 - G 90 -19.9 -3.20367 | gap 1, overlap 724326 724325 GAAGAAGTCGACGAA CATCAGCTCGACGATCGGCCGCAGCC CGAGATT GGCGGCG-CCGACCGCCGCGCCGATG AAGGCCGTTTCCGAA Swit_0668 725624 - 724629 - | dehydrogenase, E1 component Swit_0669 725817 - 727499 + | AMP-dependent synthetase and ligase Swit_0670 730140 - 727468 - | regulatory protein, LuxR Swit_0671 730727 - 730272 - | hypothetical protein TERM 373 730704 - 730671 - G 71 -2.4 -4.62069 | gap 2, overlap 730673 GCGCCAGCGGAAAAA GGGGAT-GACC-GCCG CGGC CGGCCAGTCGACCGCC TCGACATAGAGCGCC Swit_0672 731766 - 730732 - | Rieske (2Fe-2S) domain-containing protein Swit_0673 734051 - 731766 - | TonB-dependent receptor Swit_0674 734224 - 734628 + | endoribonuclease L-PSP Swit_0675 734628 - 735176 + | hypothetical protein TERM 374 735267 - 735248 - f 74 -5 -4.64598 | TAAGGACTCGAAAAA TTGCTCCC TCCG AGAAGCAA AATTTCAAATTCCTT TERM 375 735948 - 735910 - g 70 -8.9 -3.92641 | gap 1, overlap 735945 AAGCTGATGGAGAAA GCGGTCGGC-CAGACGAT CACG ATCGTCCGCACCAACCCC GCGACCGGCGCCGAG Swit_0676 735628 - 736992 + | hypothetical protein Swit_0677 736989 - 738563 + | hypothetical protein TERM 376 739348 - 739338 - g 70 -8.2 -3.85509 | GCAATAGAATTGAAA GCGC CAA GCGC CCCGCCATCGAGAAA TERM 377 739861 - 739849 - g 79 -7.7 -4.41237 | overlap 739859 ATGAAATAATAGAAA TCCTG GAA CAGGA CGTCCGGAAAATCGC Swit_0678 738630 - 739889 + | hypothetical protein Swit_0679 740629 - 741870 + | kynureninase Swit_0680 741947 - 744208 + | TonB-dependent receptor TERM 378 744402 - 744458 + G 80 -18.1 -2.87132 | CCTGATCCACGACGA TCGCATCACCGCCGT-CCAGCCGGGGT TCGTC ACCCCGGCCGGCGCGGAGGTGGT-CGA TCTCTCGCGGCAGAC Swit_0681 744244 - 745542 + | amidohydrolase Swit_0682 745526 - 746035 + | AsnC family transcriptional regulator Swit_0683 746086 - 747453 + | amino acid permease-associated region Swit_0684 747939 - 747466 - | pseudoazurin Swit_0685 748535 - 747987 - | hypothetical protein TERM 379 749754 - 749811 + G 87 -20.7 -3.08224 | gap 3, opp_overlap 749793, overlap 749754 TCGCCGCCTTCGATC CCGCGATCGTCGCGGCGC-TG-CC-CGG CACGA TCGAGGACATGCGCCGCGACGGACGCGG CTTTTCCGATGCGAT TERM 380 749754 - 749812 + G 95 -14.7 -4.14243 | gap 4, opp_overlap 749793, overlap 749754 TCGCCGCCTTCGATC -CCGCGATCGTCGCGGCGC-TG-CC-CGG CACGA TCGAGGACATGCGCCGCGACGGACGCGGC TTTTCCGATGCGATG Swit_0686 748568 - 750361 + | beta-lactamase domain-containing protein Swit_0687 752715 - 750397 - | TonB-dependent receptor Swit_0688 754729 - 752774 - | acetyl-coenzyme A synthetase Swit_0689 756215 - 754836 - | hypothetical protein Swit_0690 757290 - 756334 - | YVTN beta-propeller repeat-containing protein Swit_0691 757366 - 757863 + | hypothetical protein TERM 381 758023 - 757997 - g 85 -15.8 -3.56325 | GGTCTACAAGGACAA CCGGCCCTGGTC GTG GACCGAGGCCGG CAAGGTCCACGGCAT Swit_0692 757860 - 758717 + | extracellular solute-binding protein Swit_0693 758813 - 760552 + | Pyrrolo-quinoline quinone Swit_0694 760566 - 761324 + | two component LuxR family transcriptional regulator Swit_0695 761468 - 761929 + | hypothetical protein Swit_0696 762866 - 761964 - | hypothetical protein TERM 382 762318 - 762291 - G 73 -7.6 -4.18018 | opp_overlap 762312 CTCGCGGATCGAAAA GGGATCGTCGAC TACC GTCCACGGCCCC TCCGCCGTCGGGCCC Swit_0697 763662 - 762871 - | short-chain dehydrogenase/reductase SDR Swit_0698 763790 - 764710 + | protein tyrosine/serine phosphatase Swit_0699 766966 - 764732 - | signal transduction histidine kinase Swit_0700 768111 - 766969 - | hypothetical protein Swit_0701 769451 - 768141 - | hypothetical protein Swit_0702 769846 - 769457 - | hypothetical protein TERM 383 769898 - 769871 - R 91 -17.8 -3.24021 | overlap 769866 CTCCCAAATAGCGAA TCGACGGGCATC CGAA GATGCCCGCCGA GGGGAAGCGGCGCGG Swit_0703 771468 - 769948 - | aldehyde dehydrogenase Swit_0704 772604 - 771564 - | luciferase family protein Swit_0705 773803 - 772676 - | major facilitator transporter TERM 384 773249 - 773216 - G 72 -15.1 -2.96216 | overlap 773195 773197 GCCGAGCAGCAGATA GGGGCCGGCGCGCGG CCCG CCGCCCGCCTGCCCG GCCGCCTCCGCCGGG TERM 385 773823 - 773845 + r 85 -14.8 -3.56092 | opp_overlap 773806 ATCCCCTTTCCGGAC GGGCTCCCCC GGC GGAGGAGCCC TTTCCGGCATCATCA Swit_0706 776236 - 773858 - | TonB-dependent receptor TERM 386 774391 - 774422 + g 73 -9.5 -3.8512 | gap 1, opp_overlap 774371 CGATCGGGCCGGGGC CGTCCGGGTCGACC ACATA GGT-GACCTGGATG TTCTTGTAGTCGGTG Swit_0707 776710 - 776270 - | activator of Hsp90 ATPase 1 family protein Swit_0708 778820 - 776703 - | hypothetical protein TERM 387 777870 - 777840 - G 75 -9.7 -3.96148 | GCTGGGCACGAGAAA GGCGAGCGG-CGCGG GCT CCGCGTCCGGT-GCC GGCAGAACGAAGAAA TERM 388 778217 - 778251 + g 100 -20.2 -4.21194 | overlap 778192 CGACGCGCGGCCGGG CGATCTTCCCGTCG AAACAGG CGACGGGAAGATCG TTTTCGATAATCGCA Swit_0709 781189 - 778817 - | TonB-dependent receptor TERM 389 779450 - 779471 + g 73 -7.9 -4.14392 | CCACTCGCTCTTGAT GCCGGCCTC GTAG GAGGTCGCC TTTTCGGGCTTGGCA Swit_0710 782719 - 781355 - | major facilitator transporter TERM 390 782026 - 781997 - G 79 -14.9 -3.25823 | overlap 781998 GCGCGGCGACAGGAA GGCGCGGAGGGAG GGTC CGCCCTGCGCGCC CGCCACCCGCGCGCG TERM 391 782038 - 781998 - G 73 -15.9 -2.55351 | overlap 781997 CGCGGCGACAGGAAG GCGCGGAGGGAGGGTCCGC CCT GCGCGCCCGCCACCCGCGC GCGCGCCGGCTCGCG Swit_0711 784787 - 782712 - | hypothetical protein TERM 392 782842 - 782883 + g 74 -14.3 -3.28924 | gap 1, opp_overlap 782835 782837 ACCGAGAACACGTCG CCGCGCCGGCCATG-GCCGG GGA TCAGCACGAGGTCGGCGCGG TTCTCGCCGAGCGTC Swit_0712 785983 - 784841 - | aldo/keto reductase Swit_0713 786372 - 785980 - | hypothetical protein TERM 393 786408 - 786397 - H 72 -4.4 -4.64861 | overlap 786399 786400 TGTCTGGAAAAGAAA GATG CGCG CATC GGCGCCGGATGGCGC Swit_0714 786827 - 789169 + | TonB-dependent receptor TERM 394 789215 - 789176 - f 73 -11.4 -3.64703 | gap 1, opp_overlap 789177, overlap 789177 CGCTTCTGACCGAAA GCGGCGGGGGAAGGAAGTC CGC GACA-CCTTCCCCCACCAT GATCTGACCTGGAGG TERM 395 789214 - 789177 - f 75 -14.9 -2.78679 | gap 1, opp_overlap 789177, overlap 789176 GCTTCTGACCGAAAG CGGCGGGGGAAGGAAGTC CGC GACA-CCTTCCCCCACCA TGATCTGACCTGGAG Swit_0715 789240 - 790934 + | amidohydrolase 3 Swit_0716 791044 - 791934 + | AraC family transcriptional regulator TERM 396 792720 - 792678 - g 95 -21.2 -3.29511 | CGGATCGCCCGACAA GCGCCCCGCCGCGCGGATCG CGA CGATCGAGGCGGCCGGGCGC GCCGGCGTGCCCTTC TERM 397 793416 - 793372 - g 80 -16.5 -3.14931 | opp_overlap 793355, overlap 793348 GCGACGCTCGACGAA GGCGAGATCGTCGCGCT GTTCCGGGCCG AGCGCGGCGACCTCGCC GCGATCGTCCGCACC fbiC 792109 - 794448 + | FO synthase Swit_0718 794445 - 795116 + | reduced coenzyme F420:NADP oxidoreductase Swit_0719 795921 - 795136 - | AraC family transcriptional regulator Swit_0720 796023 - 797234 + | major facilitator transporter Swit_0721 799363 - 797255 - | Pyrrolo-quinoline quinone Swit_0722 800489 - 799413 - | helix-turn-helix domain-containing protein TERM 398 799565 - 799615 + g 73 -12.5 -3.53012 | gap 1, opp_overlap 799580 AGTACTGGTTGGCGA GCGCGGTCACCGAAATC-TCGCCG TCGC TGGCGATGATGTCGGCGCGCGCGC TTTCCAGCCGGCGCA Swit_0723 801058 - 800615 - | hypothetical protein Swit_0724 802089 - 801079 - | methylenetetrahydromethanopterin reductase Swit_0725 804503 - 802131 - | TonB-dependent receptor TERM 399 802773 - 802794 + g 75 -10.1 -4.07568 | opp_overlap 802760 CAGCTCGGTCTTCAG GCCGACCTC GTAG GAGGTCGCC TTTTCCGGGCCGGCA Swit_0726 805241 - 804753 - | AsnC family transcriptional regulator Swit_0727 805323 - 806300 + | hypothetical protein Swit_0728 807861 - 806305 - | glucose-methanol-choline oxidoreductase Swit_0729 808367 - 807858 - | hypothetical protein Swit_0730 810670 - 808385 - | TonB-dependent receptor Swit_0731 812094 - 810946 - | amidase TERM 400 812140 - 812192 + r 75 -12 -3.64371 | gap 2, overlap 812142 CCAGGCCGCGATGGC GTCGCGGTCGACCTCGGCGATGGCGT TGA GCGCCGTCGCCC-GGTCGATCA-GGC TTTCGAGTGTCGCTT TERM 401 812142 - 812191 + r 72 -13.5 -2.7814 | gap 1, overlap 812140 AGGCCGCGATGGCGT CGCGGTCGACCTCGGCGATGGCGT TGA GCGCCGTCGCCC-GGTCGATCAGG CTTTCGAGTGTCGCT Swit_0732 813728 - 812223 - | aldehyde dehydrogenase (acceptor) Swit_0733 813956 - 814948 + | AraC family transcriptional regulator TERM 402 814983 - 814959 - T 85 -14.3 -3.54424 | overlap 814960 GCTGACCTCCTGAAA TCCTCCCCATC GCA GATGGGGAGGG GGACCATCCGAAGGA TERM 403 814982 - 814960 - T 86 -17.8 -2.72511 | overlap 814959 CTGACCTCCTGAAAT CCTCCCCATC GCA GATGGGGAGG GGGACCATCCGAAGG TERM 404 815065 - 815089 + T 85 -14.3 -3.63627 | overlap 815066 CGCCTTCGGCGGTCC CCCTCCCCATC TGC GATGGGGAGGA TTTAGAATATCCGGC TERM 405 815066 - 815088 + T 86 -17.8 -2.77962 | overlap 815065 GCCTTCGGCGGTCCC CCTCCCCATC TGC GATGGGGAGG ATTTAGAATATCCGG Swit_0734 816446 - 815091 - | FAD linked oxidase domain-containing protein Swit_0735 817444 - 816446 - | 3-hydroxybutyryl-CoA dehydrogenase Swit_0736 818513 - 817431 - | NAD/NADP octopine/nopaline dehydrogenase TERM 406 819823 - 819865 + G 74 -13.5 -3.25942 | gap 2 GACCGCCGTCATGCA GATCGTCGCGCCGGCCGCGAT GCG GTCGCGG--GTCGCGGCGATC TTCCTGTGCAGCAAT Swit_0737 818765 - 820078 + | major facilitator transporter Swit_0738 820190 - 821350 + | acyl-CoA dehydrogenase type 2 TERM 407 821402 - 821424 + G 81 -10.6 -4.254 | CGTCTTCGCGTCCTC TTCTGCGGCG CGG TGCTGCAGAA TTTCTTCGATCTTCC Swit_0739 821369 - 821728 + | hypothetical protein Swit_0740 821725 - 822480 + | short-chain dehydrogenase/reductase SDR Swit_0741 822548 - 823021 + | MarR family transcriptional regulator Swit_0742 823882 - 823037 - | 2-keto-4-pentenoate hydratase-like protein TERM 408 823797 - 823773 - G 73 -7.7 -4.1585 | opp_overlap 823788, overlap 823764 823774 GGATAATCGGGAAAA CCGATGGCCGC GCT GCGGGCCTCGA CGAATTTCGCCGCCT Swit_0743 824518 - 824003 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_0744 825771 - 824515 - | Rieske (2Fe-2S) domain-containing protein Swit_0745 826319 - 825768 - | hypothetical protein Swit_0746 827464 - 826316 - | amidase Swit_0747 827543 - 828019 + | MarR family transcriptional regulator Swit_0748 830181 - 828154 - | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase TERM 409 829266 - 829307 + g 85 -18.7 -3.0497 | gap 1, opp_overlap 829276, overlap 829276 CGTCGAGCCACTGGG CGGGGACGAAG-GCGCGGCG GAT CGCCGTGCACTTCTGCCCCG TCTTCACCGTCATCT TERM 410 830223 - 830208 - R 91 -11.8 -4.30576 | opp_overlap 830207 830204 TCTCGATCAGGAAAA CGGGCG TCAG CGCCCG GTGAATTTGGGGGCC Swit_0749 831005 - 830214 - | phenylacetate degradation, enoyl-CoA hydratase paaB Swit_0750 831110 - 832579 + | 3-hydroxyacyl-CoA dehydrogenase Swit_0751 832576 - 833025 + | phenylacetic acid degradation protein PaaD Swit_0752 833018 - 834217 + | beta-ketoadipyl CoA thiolase Swit_0753 834323 - 835321 + | phenylacetate-CoA oxygenase subunit PaaA Swit_0754 835339 - 835623 + | phenylacetate-CoA oxygenase subunit PaaB Swit_0755 835631 - 836383 + | phenylacetate-CoA oxygenase, PaaI subunit Swit_0756 836389 - 836889 + | phenylacetate-CoA oxygenase, PaaJ subunit Swit_0757 836951 - 838027 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit Swit_0758 838020 - 838799 + | enoyl-CoA hydratase/isomerase Swit_0759 839817 - 838807 - | acyltransferase 3 Swit_0760 840562 - 839984 - | TetR family transcriptional regulator Swit_0761 841930 - 840668 - | dehydrogenase catalytic domain-containing protein Swit_0762 844023 - 841945 - | transketolase domain-containing protein Swit_0763 845248 - 844043 - | aromatic amino acid aminotransferase Swit_0764 845374 - 845844 + | AsnC family transcriptional regulator Swit_0765 848310 - 845971 - | TonB-dependent receptor Swit_0766 848421 - 849515 + | response regulator receiver protein TERM 411 849718 - 849677 - T 76 -11.5 -3.7791 | gap 1, opp_overlap 849716, overlap 849715 849716 CAATGACTTAGGAAA GCCGCCTGATCAGGCCGCCG GCT CAGCCGCCAGA-CAAACGGC GTGGCGGGCGCGCAA Swit_0767 851314 - 849686 - | AMP-dependent synthetase and ligase TERM 412 849716 - 849737 + g 77 -11.5 -3.84639 | opp_overlap 849677 849716 849715 AGCCGCCAGACAAAC GGCGTGGCG GGCG CGCAACGCC TTCTTGTCGATCTTG Swit_0768 851912 - 851433 - | hypothetical protein Swit_0769 851973 - 853634 + | short chain dehydrogenase Swit_0770 853643 - 854191 + | hypothetical protein Swit_0771 855540 - 854239 - | molecular chaperone-like protein TERM 413 854390 - 854356 - G 74 -16.4 -2.70932 | GCGGCGCTCGAACGA CCGGCGGATCGCCG GGATCAG CGACGAGCCGCCGG TCAGGAAGACGCGGT TERM 414 854415 - 854456 + g 74 -12.8 -3.64703 | opp_overlap 854398 854439 CGCGGTCGATCGCCT CCGGCGTCACCCCGGCGC GAAGCA GCGCCGCGTCGACGGCGG TTTCGATCCGGGCGA Swit_0772 855950 - 855540 - | hypothetical protein TERM 415 855859 - 855914 + g 89 -18.9 -3.37017 | overlap 855890 TCGCGCTCGGCGGCA CGGCGGTCGCCGCGCGCCTGCGCG-GC TTCG GCGCGCTCGGCCGCCCGGCGGCC-CCG TTCCTCTTCCCGGTT TERM 416 855936 - 855953 + g 81 -3.3 -4.84274 | TTCCCGGTTGCGCGC CCGGTCG TCGT CCATCGG TTTTTCCTCTGCTTC TERM 417 855987 - 856014 + H 91 -16.3 -3.62522 | gap 1, opp_overlap 855984 855985, overlap 856010 GTTGCTCGCAAATGC GGCTCGCCCGGC CGCAA GCCGGGCG-GCC TTGTTCGGGCCGTTC Swit_0773 856095 - 856310 + | hypothetical protein Swit_0774 857039 - 856311 - | regulatory protein, LuxR Swit_0775 857175 - 858134 + | beta-lactamase domain-containing protein Swit_0776 858141 - 859715 + | hypothetical protein Swit_0777 859712 - 859906 + | hypothetical protein Swit_0778 861105 - 860026 - | branched-chain amino acid aminotransferase Swit_0779 862578 - 861178 - | dihydrolipoamide dehydrogenase Swit_0780 863847 - 862582 - | branched-chain alpha-keto acid dehydrogenase E2 component Swit_0781 864863 - 863850 - | branched-chain alpha-keto acid dehydrogenase E1 component Swit_0782 866097 - 864868 - | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) Swit_0783 866255 - 866707 + | AsnC family transcriptional regulator Swit_0784 867703 - 866717 - | hypothetical protein Swit_0785 868991 - 867705 - | hypothetical protein Swit_0786 870631 - 869078 - | substrate-binding region of ABC-type glycine betaine transport system TERM 418 869366 - 869348 - G 76 -7.4 -4.25104 | overlap 869359 CCCGTCCGACGAAAA GGCCGA GATCACG TCGGCC GATCCGTCCGCCAGC Swit_0787 871473 - 870628 - | ABC transporter related TERM 419 871201 - 871153 - G 78 -16 -3.09273 | CCCCTGGAAGACATA GC-CGATGCGGCGGCGCAACTCGG CGA CCG-GCTGCGCCGCGACGTCGCGC CCCTCGATCGCGATC Swit_0789 874276 - 872717 - | AMP-dependent synthetase and ligase Swit_0788 871541 - 872797 + | beta-lactamase TERM 420 872788 - 872827 + gT 86 -15.1 -3.57144 | gap 1, opp_overlap 872815 CCTTGCCGTTCGGGC TGCGCGGTAGCGCGTCGA CGAAA TCGACGCGCT-TCGGGCA TTTGACGCTCCCCAG TERM 421 874156 - 874111 - GT 77 -15.5 -2.64616 | gap 3 CGTTCAGCGACAGCA CGGCGC-CGC-GGCTGCCGGGC GCGAA GCCC-GCATCCCGCGCGCGCCG GGCGAAACGACGGGT Swit_0790 875523 - 874279 - | thiolase TERM 422 874314 - 874348 + g 79 -15.6 -3.30124 | overlap 874315 GGATGGCGACGGCGG CGGCGGCGTCCTCGAC ACC GTAGAGGCCGCCGCCA TTCTCCAGCATGGCG TERM 423 874315 - 874347 + g 79 -19.1 -2.57931 | overlap 874314 GATGGCGACGGCGGC GGCGGCGTCCTCGAC ACC GTAGAGGCCGCCGCC ATTCTCCAGCATGGC Swit_0791 875682 - 877199 + | hypothetical protein Swit_0792 877196 - 878308 + | DegT/DnrJ/EryC1/StrS aminotransferase Swit_0793 878317 - 878931 + | acetyltransferase TERM 424 879920 - 879898 - g 73 -12.6 -3.45023 | CGAGGACGACCATAA GCGCGGCGAC TAT GCCGCCGCCC TCGCCACCTTCCGCG Swit_0794 878990 - 880609 + | tetratricopeptide TPR_4 Swit_0795 880622 - 881122 + | hypothetical protein Swit_0796 881163 - 882641 + | hypothetical protein Swit_0797 883474 - 882821 - | cyclic nucleotide-binding protein Swit_0798 885470 - 883632 - | peptidase C14, caspase catalytic subunit p20 Swit_0799 888648 - 885505 - | hypothetical protein TERM 425 888584 - 888628 + g 100 -25 -3.50853 | gap 1 TCGGGCGAGGGAGGT GCGGGGGGCGCCG-GTTCCGG CTGG CCGGGGCCCGGAGCCCCCCGC TTCTCGTTCGGACCG Swit_0800 891174 - 888676 - | hypothetical protein Swit_0801 891490 - 891741 + | hypothetical protein Swit_0802 893145 - 891748 - | TPR repeat-containing protein Swit_0803 895110 - 893236 - | putative signal transduction histidine kinase TERM 426 894307 - 894255 - G 72 -8.5 -4.07568 | gap 3, opp_overlap 894289, overlap 894237 894259 894304 GTGGTCCGGCGAAAA GCC-ATGT-CCGCCGCGTGACCGGCG CGCC CACCAG-CGCGCGGCAGAACATCAGC GCCGCGGCGATTTCC Swit_0804 895778 - 895089 - | two component LuxR family transcriptional regulator Swit_0805 895921 - 896451 + | hypothetical protein TERM 427 896495 - 896449 - T 100 -14.3 -4.30719 | gap 1, overlap 896451 896454 TGCGTCGAGAACAAA TAGGAC-CGGACGGCCGCCGGC GCAC ACCGGCGGCCGGCCGCGCGCTG CCCGGATCGATCAGC TERM 428 896493 - 896451 - T 100 -16.9 -3.75817 | gap 1, overlap 896449 896454 CGTCGAGAACAAATA GGAC-CGGACGGCCGCCGGC GCAC ACCGGCGGCCGGCCGCGCGC TGCCCGGATCGATCA TERM 429 896489 - 896454 - T 93 -19.6 -2.96748 | overlap 896451 896449 CGAGAACAAATAGGA CCGGACGGCCGCCGGC GCAC ACCGGCGGCCGGCCGC GCGCTGCCCGGATCG Swit_0806 896958 - 896506 - | AsnC family transcriptional regulator Swit_0807 897090 - 898226 + | alanine racemase Swit_0808 898223 - 899473 + | D-amino acid dehydrogenase small subunit Swit_0809 899499 - 899846 + | endoribonuclease L-PSP TERM 430 899894 - 899849 - f 81 -15.4 -3.06261 | gap 2 CGCCAAGGCGTAAGA CGGGACATCCGGCCGGCCGCGG GGAA CCGC-GCCGGCCGGCT-CCGCG AAACCGGCCAGAACG TERM 431 900775 - 900748 - g 71 -9.8 -3.71848 | CTGGCGGATGAAGAA GGTCCGCTCG CTCGTCGC CGAGCGGCCC GGGCTCGACCTGTCG Swit_0810 900131 - 901051 + | AraC family transcriptional regulator Swit_0811 901462 - 901058 - | hypothetical protein Swit_0812 903826 - 901484 - | TonB-dependent receptor TERM 432 903966 - 903914 - R 91 -16.9 -3.29273 | overlap 903912 GCCATCATCAGAATA TCGCGGGGACCGTCGGGCCCGCC ATGGTCA GGCGAGCGCGACGACCGCGGCGA GGCCGATGGCGATCG Swit_0813 904273 - 903941 - | hypothetical protein Swit_0814 904441 - 904788 + | hypothetical protein TERM 433 904774 - 904800 + F 73 -8.6 -4.07687 | overlap 904776 ACCGTGGTGCCGTGG TGGATGGGCCGT TGA GCGGCCCGATCA TTTTCGCAGGAACAT Swit_0815 904918 - 906048 + | luciferase family protein Swit_0816 906170 - 907129 + | AraC family transcriptional regulator Swit_0817 908539 - 907145 - | amidohydrolase TERM 434 907412 - 907387 - G 70 -14.7 -2.73875 | overlap 907384 CCGTGTCGAAGATGA CGAGGTCGGCA GCCT TGCCGGCCTCG ATCGAGCCGATCCGG Swit_0818 910925 - 908556 - | TonB-dependent receptor Swit_0819 911167 - 912297 + | gentisate 1,2-dioxygenase Swit_0820 912320 - 913231 + | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_0821 913645 - 913247 - | thioesterase superfamily protein TERM 435 913452 - 913428 - G 78 -17.1 -2.80994 | opp_overlap 913426 913424 913424 TCGAAGTCGAGCAGA TCGCCGAGCCG GCT CGGCGCGGCGA AGTCGGTTTCGAGGC TERM 436 913604 - 913588 - G 70 -12.3 -3.31905 | overlap 913586 AGCGCGGATAGAAGA CGATGCC GGC GGCATCG ACATGCGCGAAGCGC TERM 437 913714 - 913683 - R 90 -13.6 -4.07568 | opp_overlap 913683, overlap 913684 GCCCTTCTGGCAAAA GGGCCCCGCATCCC TGTC GGAAGGCGGGGCCG CTCCTGTCCCGAGGG TERM 438 913713 - 913684 - R 88 -17.1 -3.04398 | opp_overlap 913683, overlap 913683 CCCTTCTGGCAAAAG GGCCCCGCATCCC TGTC GGAAGGCGGGGCC GCTCCTGTCCCGAGG Swit_0822 914930 - 913746 - | acyl-CoA dehydrogenase domain-containing protein Swit_0823 915346 - 914954 - | endoribonuclease L-PSP Swit_0824 916524 - 915343 - | acyl-CoA dehydrogenase domain-containing protein Swit_0825 917344 - 916526 - | enoyl-CoA hydratase Swit_0826 918115 - 917354 - | short-chain dehydrogenase/reductase SDR Swit_0827 920427 - 918112 - | salicylyl-CoA 5-hydroxylase Swit_0828 922544 - 920508 - | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase TERM 439 920575 - 920533 - G 78 -13.4 -3.55444 | gap 2, opp_overlap 920534 CGCGGATCGTCGAAA CGCTCGCCCCGC-GC-GGCC TTTTC GGCGAGCAGCGGGGCGACCG GCATGCCATGCGCCC Swit_0829 924139 - 922574 - | benzoate-CoA ligase TERM 440 923991 - 924048 + g 77 -15 -3.21395 | gap 2, opp_overlap 923978, overlap 924031 TAGCCGGCGAAGCGG TCGACGCGCTCGGCGATCTC-G-CGGTA GCTG TACCGCCCGAGATCGTCGATCACGGCGA TCTTGTCGGCGCGAT TERM 441 924224 - 924258 + r 95 -15.7 -3.99324 | gap 1, overlap 924227 924228 924238 CCTTCGGCCCGCCTT TCGCCGCCGTCCCGCG CGAT CGCGGGGCGGC-GCTA TTTCTCGTCGTCGGC TERM 442 924227 - 924256 + r 100 -18.5 -3.58864 | overlap 924224 924228 924238 TCGGCCCGCCTTTCG CCGCCGTCCCGCG CGAT CGCGGGGCGGCGC TATTTCTCGTCGTCG TERM 443 924228 - 924255 + r 100 -22 -2.74836 | overlap 924227 924224 924238 CGGCCCGCCTTTCGC CGCCGTCCCGCG CGAT CGCGGGGCGGCG CTATTTCTCGTCGTC Swit_0830 924741 - 924256 - | MarR family transcriptional regulator TERM 444 924859 - 924841 - R 77 -13.8 -3.33696 | overlap 924814 GCCGCCGCCAAGCAA GGCGCCGG CGC CCGGCACC CGGCGTTCGAGCCCG Swit_0831 925575 - 924820 - | Asp/Glu racemase TERM 445 925216 - 925255 + g 90 -13.4 -4.09685 | overlap 925219 925233 925234 CCGCAGCCCGTCGAC CAGCGCCCCCGCGCTGGT CACC ACCGGGGCGGGCGCGTCG TTTTCGACCGTCCGC TERM 446 925219 - 925252 + g 78 -15.9 -3.08508 | overlap 925216 925233 925234 CAGCCCGTCGACCAG CGCCCCCGCGCTGGT CACC ACCGGGGCGGGCGCG TCGTTTTCGACCGTC Swit_0832 926601 - 925597 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 447 926616 - 926638 + r 71 -6.1 -4.37658 | TGGTCTTCCCCTCGT GGCAGGAGC CGAAA GCGCCGGCC TTTTGTGGCCGAATT Swit_0833 929426 - 926712 - | regulatory protein, LuxR Swit_0834 929564 - 930046 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Swit_0835 930048 - 932429 + | xanthine dehydrogenase, molybdenum binding subunit apoprotein TERM 448 932471 - 932446 - T 100 -19.7 -4.61873 | overlap 932413 CTCCAGAAACGAAAA GGCCGGGCGCG CGCA CGCACCCGGCC CCGGCCGTCCCCGCG Swit_0836 932885 - 932490 - | endoribonuclease L-PSP TERM 449 932828 - 932806 - G 73 -10.5 -3.96093 | GAGATGAACAGGAAA TCGCCGGCG CGGAC CGCCTGCGA AAAGCCATAGTCGTC TERM 450 932940 - 932907 - R 100 -22.5 -4.07687 | overlap 932908 ACTCCTTCGTGAAAA TGGAGGATGCCGGCG GGCC CGCCGGCATCCTCCC CAAAACGGCTAGTGA TERM 451 932939 - 932908 - R 100 -26 -3.04398 | overlap 932907 CTCCTTCGTGAAAAT GGAGGATGCCGGCG GGCC CGCCGGCATCCTCC CCAAAACGGCTAGTG Swit_0837 933989 - 932949 - | Rieske (2Fe-2S) domain-containing protein TERM 452 934071 - 934054 - R 72 -14.1 -2.70932 | CGGGCGCCGGAAGGA CGGCGGC CGAC GCCGCCG CCTTCCGGCCCCGCG Swit_0838 936445 - 934091 - | TonB-dependent receptor Swit_0839 936790 - 937773 + | pyruvate dehydrogenase (acetyl-transferring) TERM 453 938743 - 938763 + G 71 -10.3 -3.72576 | opp_overlap 938714 938740, overlap 938741 ATGCCGAGAGCATCG GCGCCGCGG CGG CCGCGCTGC TTTCCTGACGAAGAG Swit_0840 937788 - 938771 + | transketolase, central region TERM 454 938814 - 938826 + G 75 -9.1 -4.18018 | GACACAGGTGCTTCT GCCCA AGC TGGGC TTTTCGATGAGCGAG Swit_0841 938794 - 939024 + | biotin/lipoyl attachment domain-containing protein Swit_0842 939091 - 939909 + | molybdopterin dehydrogenase, FAD-binding Swit_0843 939914 - 941455 + | acyl-CoA synthetase Swit_0844 941649 - 942647 + | NAD-dependent epimerase/dehydratase TERM 455 942922 - 942880 - g 71 -11.2 -3.54424 | gap 1, overlap 942916 GTCCACGCGCCGAAA CCGGAAGCCCGCCCGGCCG TTGAAG CGGCCAGGGAAGC-CCCGG CCGTGCCGGTCGCGG Swit_0845 942652 - 943011 + | hypothetical protein Swit_0846 943030 - 943911 + | carboxymethylenebutenolidase Swit_0847 943908 - 944510 + | glutathione S-transferase domain-containing protein Swit_0848 945225 - 944470 - | WecB/TagA/CpsF family glycosyl transferase TERM 456 944808 - 944764 - G 100 -22.7 -3.23216 | CGCGATCAGGATGAA GCGCGCGCCGCTGTCGATGGC GAA GCGAGCGGCGGCGGCGCGCGC GGCGGGATCGTCGCG TERM 457 945273 - 945296 + r 75 -13.8 -3.09516 | opp_overlap 945254 945274 AGCGGGCAAAGAAAA AGGCCCGGTG TCGC CACCGGGCCC TTCGGTCATCCGACC TERM 458 945295 - 945274 - R 100 -17.3 -5.27335 | opp_overlap 945273, overlap 945254 GCGGGCAAAGAAAAA GGCCCGGTG TCGC CACCGGGCC CTTCGGTCATCCGAC Swit_0849 946050 - 945322 - | hypothetical protein Swit_0850 946193 - 946726 + | 2'-5' RNA ligase Swit_0851 947196 - 946711 - | protein tyrosine phosphatase Swit_0852 947744 - 947193 - | superoxide dismutase, copper/zinc binding TERM 459 947852 - 947831 - R 100 -15.1 -5.40464 | opp_overlap 947829 947828 GAGGACAAAGAAAAA GGGCCGGCC CGAA GGCCGACCC CAATTCTGCGCGTCA Swit_0853 949013 - 947892 - | OmpA/MotB domain-containing protein TERM 460 949071 - 949092 + r 76 -10.1 -3.85698 | opp_overlap 949069, overlap 949089 CCTAACCCAATCACC CGGATACGC GCAA GCGCATCCG TTTCTGCGACGAACC Swit_0854 949858 - 949262 - | SOUL heme-binding protein Swit_0855 950024 - 950587 + | XRE family transcriptional regulator Swit_0856 950678 - 951997 + | methionine gamma-lyase Swit_0857 952900 - 952016 - | MarR family transcriptional regulator TERM 461 953607 - 953658 + G 80 -15.8 -3.14931 | gap 1, opp_overlap 953581 953612, overlap 953640 GACCGGCGAGACCGG CAAGACCTGCGAGGCGCAGCCCGAC GAG GTCGAGC-GCGCCTGACGGGTCCTG TTCCTCAGCCGTCGC TERM 462 953653 - 953612 - g 74 -15.1 -3.05343 | gap 1, opp_overlap 953607 953640, overlap 953581 GCGAGACCGGCAAGA CCTGCGAGGCGCAGCCCGAC GAG GTCGAGC-GCGCCTGACGGG TCCTGTTCCTCAGCC Swit_0858 953089 - 953649 + | hemerythrin HHE cation binding domain-containing protein Swit_0859 954946 - 953663 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 463 955172 - 955114 - H 100 -25.6 -3.6502 | opp_overlap 955166 955168, overlap 955116 955156 955162 955163 CAGGCTCTATTCAAA TAGTTGAGACCTTGATCGTTTCAGGCTG ATT CAGCCTGAAACGATCAAGGTCTAGACCC GATCCGGTTCAGGTT TERM 464 955170 - 955116 - H 100 -30.4 -3.40597 | opp_overlap 955166 955168, overlap 955114 955156 955162 955163 GGCTCTATTCAAATA GTTGAGACCTTGATCGTTTCAGGCTG ATT CAGCCTGAAACGATCAAGGTCTAGAC CCGATCCGGTTCAGG TERM 465 955166 - 955204 + H 100 -21.2 -4.39571 | opp_overlap 955116 955114 955156 955163 955162, overlap 955168 GAAACGATCAAGGTC TAGACCCGATCCGGTTCA GGT TGAACCCGATCGGGTCTG TTTTCCCTTTGTCCA TERM 466 955168 - 955202 + H 100 -21.6 -3.79633 | opp_overlap 955116 955114 955156 955163 955162, overlap 955166 AACGATCAAGGTCTA GACCCGATCCGGTTCA GGT TGAACCCGATCGGGTC TGTTTTCCCTTTGTC TERM 467 955422 - 955471 + G 82 -18.6 -2.89564 | gap 2, opp_overlap 955414 GACCGAAGTGCGGCG GGTGCCGGCCG-AGGACGCC-CGC CAGG GCGCGGTGTCCGACGGCCGCCACC TCTATGCGGTCGACA Swit_0860 955213 - 956139 + | hypothetical protein Swit_0861 956614 - 956219 - | ATP-dependent Clp protease adaptor protein ClpS TERM 468 956728 - 956703 - R 100 -18.3 -4.41895 | AACCCGCAACGAAAA CGGCCGCCTCC CGAG GGAAGCGGCCG TCAAATCGCGACGAA Swit_0862 957650 - 956751 - | phasin family protein TERM 469 957714 - 957697 - R 71 -12.7 -3.05596 | overlap 957670 GACGCGCCGAGCCAA CGTCCGG ATGC CCGGACG GTTCCAGAATGACGT Swit_0863 959527 - 957752 - | poly(R)-hydroxyalkanoic acid synthase, class I Swit_0864 959655 - 960863 + | aminotransferase TERM 470 960921 - 960891 - f 85 -15.4 -3.40522 | opp_overlap 960896, overlap 960896 ATCGTCGCACGACAA GGGAAGGGAGGCGG CCA CCGCCTCCCTTTTC CGTTTGACCGCGACC TERM 471 960896 - 960916 + F 100 -18.3 -4.35524 | opp_overlap 960891 960896 CGCACGACAAGGGAA GGGAGGCGG CCA CCGCCTCCC TTTTCCGTTTGACCG TERM 472 960916 - 960896 - f 91 -18.3 -3.25072 | opp_overlap 960896, overlap 960891 CGCACGACAAGGGAA GGGAGGCGG CCA CCGCCTCCC TTTTCCGTTTGACCG Swit_0865 960960 - 961415 + | hypothetical protein Swit_0866 961412 - 961816 + | hypothetical protein TERM 473 961849 - 961820 - f 100 -17.9 -4.55128 | ACCCGGAAATGAAAA GAGTTGCCGAGGC CGAA GCCCCGGCAACCC CTAACATGGTCAGCG Swit_0867 961947 - 962348 + | hypothetical protein TERM 474 962761 - 962749 - gT 75 -4.8 -4.66609 | GAGCGCATCGAAAAA GGCA TGGCT TGCC GGCAGCGTGGTGCTG TERM 475 963039 - 962995 - gT 72 -11.9 -3.37198 | overlap 962993 CCGGGAGACATAATA CCAGGCGTTGGCACGGCGGGC ATC GACCGGCGTGTCGACGGCCGG AGCATCGGCCGGCGC Swit_0869 963896 - 963303 - | hypothetical protein Swit_0868 962386 - 963378 + | hypothetical protein TERM 476 964152 - 964140 - g 72 -3.3 -4.56775 | overlap 964141 ATCTGGTTGGAAAAA GCTGC CCC GAAGC CGAGGAGACGATCAA TERM 477 964286 - 964258 - g 70 -12.3 -3.28712 | CGGCTTCTGGCAGAA CCGGCGCGTGACC GGC GAGCAGGCGCCGG AGAAGGACGCCATGG Swit_0870 964046 - 964645 + | hypothetical protein Swit_0871 964632 - 965348 + | extensin family protein Swit_0872 965410 - 966318 + | hypothetical protein Swit_0873 966946 - 966323 - | PBP family phospholipid-binding protein TERM 478 967799 - 967761 - g 74 -13.9 -3.29144 | CTATGCGCGGGAGAA GCGCGG-CGAGGTCGACGC CGT GC-TCGACCGCATCCGCGC CGAAGGCCCCCTCGC TERM 479 968064 - 968007 - g 70 -12.3 -3.30124 | overlap 968008 GCCCACCCCGGACAA GGCGGCGGCGCACCGCGCGCTGGTCGC CCGC GCGGCCGCCGCGCTCGGCATCGCCACC GAGACCGACCTGCGC Swit_0874 967057 - 968541 + | hypothetical protein Swit_0875 968623 - 968754 + | entericidin EcnAB TERM 480 968803 - 968756 - f 76 -10 -3.91084 | gap 4, opp_overlap 968758, overlap 968761 CCACCTTCAACTAAA GGGAAG-C--CTCCGGCGCCCGGC GAGC GCAGGGC-CCGGAGGCGACTTCCC TCGCGCGAACCAATC TERM 481 968758 - 968798 + F 78 -14.6 -3.05384 | gap 1, opp_overlap 968756 968761 ACCTTCAACTAAAGG GAAGCCTCCGGCGCCCGGC GAGC GCAGGGC-CCGGAGGCGAC TTCCCTCGCGCGAAC TERM 482 968795 - 968761 - f 93 -19.3 -3.33399 | gap 1, opp_overlap 968758, overlap 968756 TTCAACTAAAGGGAA GCCTCCGGCGCCCGGC GAGC GCAGGGC-CCGGAGGC GACTTCCCTCGCGCG Swit_0876 968941 - 969117 + | hypothetical protein TERM 483 969694 - 969736 + G 78 -14.1 -3.61715 | GACGGCCGCCGCGCT GGCGGACTCGATCGGCG-CGG CGA CCGGCGCCGA-CGCGCTCGCC TTCTTCGACGCGATC Swit_0877 969266 - 970603 + | tRNA (uracil-5-)-methyltransferase Gid TERM 484 970707 - 970682 - T 85 -6.1 -5.10033 | overlap 970684 970686 CCAAGAGAAAGAAAA GAGATTCCAGC TTGC GCTGGAATGAC GGAAAAATCTTAACG TERM 485 970705 - 970684 - T 72 -7.3 -4.15514 | overlap 970682 970686 AAGAGAAAGAAAAGA GATTCCAGC TTGC GCTGGAATG ACGGAAAAATCTTAA TERM 486 970703 - 970686 - T 70 -9.9 -3.63741 | overlap 970684 970682 GAGAAAGAAAAGAGA TTCCAGC TTGC GCTGGAA TGACGGAAAAATCTT Swit_0878 971127 - 970717 - | hypothetical protein Swit_0879 971273 - 972454 + | glycosyl transferase, group 1 Swit_0880 972791 - 972471 - | hypothetical protein Swit_0881 973426 - 972800 - | PadR family transcriptional regulator TERM 487 973392 - 973379 - GH 71 -9.5 -3.75461 | overlap 973368 973336 GAAACCGCCATGAAA GCCGC CGTG GCGGC CATGCTCCCGATGTC Swit_0882 973426 - 974871 + | recombination factor protein RarA Swit_0883 974868 - 975218 + | hypothetical protein Swit_0884 975215 - 976084 + | hypothetical protein TERM 488 976192 - 976212 + T 79 -9.6 -4.21676 | opp_overlap 976193, overlap 976193 CCAGCCGACATGAAA AGGGCCGC TGTCC GCGGCCCG TTTTCGATCCATTGT TERM 489 976193 - 976211 + T 73 -13.1 -3.12283 | opp_overlap 976193, overlap 976192 CAGCCGACATGAAAA GGGCCGC TGTCC GCGGCCC GTTTTCGATCCATTG TERM 490 976211 - 976193 - T 95 -13.1 -4.35116 | opp_overlap 976193 976192 CAGCCGACATGAAAA GGGCCGC TGTCC GCGGCCC GTTTTCGATCCATTG Swit_0885 976916 - 976269 - | pyroglutamyl-peptidase I Swit_0886 977674 - 976922 - | alpha/beta hydrolase fold Swit_0887 979034 - 977676 - | amidase Swit_0888 979888 - 979040 - | alpha/beta hydrolase fold Swit_0889 980419 - 979889 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_0890 981914 - 980421 - | ring hydroxylating dioxygenase, alpha subunit Swit_0891 982015 - 982710 + | GntR family transcriptional regulator TERM 491 982746 - 982765 + T 74 -15 -2.54896 | opp_overlap 982740, overlap 982715 982742 GGCGAGACAGGCGAA GCGGGGAG TTTC CTCCCCGC TCCCTTCCCTACGAA Swit_0892 984252 - 982774 - | flavoprotein involved in K+ transport-like protein Swit_0893 984669 - 984349 - | Rieske (2Fe-2S) domain-containing protein Swit_0894 985613 - 984672 - | glyoxalase/bleomycin resistance protein/dioxygenase Swit_0895 986119 - 985619 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_0896 987311 - 986109 - | Rieske (2Fe-2S) domain-containing protein TERM 492 987329 - 987344 + H 72 -2.5 -4.8048 | CCCCGCTTCTCCTTC GCGAG CAAAAT TTCGC TTTTTGATATACAAA Swit_0897 987443 - 988270 + | short-chain dehydrogenase/reductase SDR Swit_0898 988275 - 989504 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Swit_0899 991873 - 989579 - | TonB-dependent receptor Swit_0900 992086 - 992409 + | hypothetical protein Swit_0901 992465 - 993055 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Swit_0902 993580 - 993068 - | hypothetical protein Swit_0903 994924 - 993602 - | major facilitator transporter TERM 493 993760 - 993738 - G 70 -4 -4.42386 | overlap 993740 CCGCCACCGAGAAAA TAGCTGATCG CGC CGGCCAGCAA CGGACCGACGCCAAA TERM 494 994399 - 994369 - G 75 -4.6 -4.63218 | overlap 994370 CGGCCGCGAAGAAAA CGGTCCGCCATC CCCATTC GTCGGCGAACCA CCCGCCCAGGGCGAA Swit_0904 996429 - 994987 - | UbiD family decarboxylase Swit_0905 998822 - 996576 - | TonB-dependent receptor, plug TERM 495 998612 - 998623 + g 70 -3.6 -4.39002 | CTCCGAGCGCCGAAA TGGC GAGA GCCG TTTTCTGCAGCGTTT TERM 496 999198 - 999170 - R 78 -12.4 -3.75461 | gap 1 CAAAGCTGGACGAAA GCAG-CGGGCGGC TCAG GCCGCCCATCCGC CATCCGCTTATGCCG Swit_0906 999874 - 999206 - | isochorismatase hydrolase Swit_0907 1000632 - 999973 - | hypothetical protein TERM 497 1000691 - 1000663 - H 88 -17.5 -3.07816 | opp_overlap 1000665, overlap 1000665 GGTCGACGTATTGAA CAGGCCGCCCT TCGATCC AGGGCGGCCTG TGTGGATCGGCGTGC TERM 498 1000689 - 1000665 - H 78 -14.3 -3.09878 | opp_overlap 1000665, overlap 1000663 TCGACGTATTGAACA GGCCGCCCT TCGATCC AGGGCGGCC TGTGTGGATCGGCGT TERM 499 1000665 - 1000689 + H 77 -14.3 -2.91383 | opp_overlap 1000663 1000665 TCGACGTATTGAACA GGCCGCCCT TCGATCC AGGGCGGCC TGTGTGGATCGGCGT TERM 500 1001341 - 1001358 + G 75 -8.3 -4.21141 | CAGGAGATGCTGTTC GACGCGC ATGC GCGCGGC TTTGCTTTCTTCGGC Swit_0908 1000813 - 1002318 + | integrase catalytic subunit Swit_0909 1002305 - 1003033 + | IstB ATP binding domain-containing protein Swit_0910 1003302 - 1004063 + | alpha/beta hydrolase fold Swit_0911 1004060 - 1004893 + | 4-oxalocrotonate decarboxylase TERM 501 1004945 - 1004914 - g 71 -10.8 -3.54543 | gap 1 AGGCACTGGCCGAAA GGCTCG-ACGAAGCG CAA CGCCTCGCGCGCGCC ACGCCGCAACTGGAA Swit_0912 1004886 - 1005665 + | 4-oxalocrotonate decarboxylase TERM 502 1005685 - 1005731 + T 100 -15.1 -4.15044 | CGGCATCGCGGCGAC TGCGCACATCGGCGCCGGTAC ATTCG GCATCGGCGCCGGTTTGCGGA TTTATTGCGCGGCCG Swit_0913 1007049 - 1005733 - | amidohydrolase TERM 503 1007099 - 1007067 - R 100 -14.7 -4.58685 | overlap 1007069 1007070 AAACTCCGGGAAAAA GAGGGCGGCGGCGCC TCG GGAGACGCCGCCGTC GCGGGATCAGAACCT TERM 504 1007100 - 1007069 - R 86 -13.6 -3.90316 | overlap 1007067 1007070 ACTCCGGGAAAAAGA GGGCGGCGGCGCCT CGGG AGACGCCGCCGTCG CGGGATCAGAACCTG TERM 505 1007099 - 1007070 - R 87 -17.1 -2.93708 | overlap 1007067 1007069 CTCCGGGAAAAAGAG GGCGGCGGCGCCT CGGG AGACGCCGCCGTC GCGGGATCAGAACCT Swit_0914 1009514 - 1007106 - | TonB-dependent receptor TERM 506 1008016 - 1007998 - G 71 -11 -3.59979 | overlap 1008001 TTGTTGTAGCGGAAA TAACGGCC GCC GGCCGTCA GGTTGAGCCGATCGG TERM 507 1008013 - 1008001 - G 73 -10.5 -3.9392 | overlap 1007998 TTGTAGCGGAAATAA CGGCC GCC GGCCG TCAGGTTGAGCCGAT Swit_0915 1009937 - 1012708 + | hypothetical protein Swit_0916 1012778 - 1014343 + | peptidase dimerisation domain-containing protein TERM 508 1015393 - 1015346 - g 74 -13.2 -3.29144 | gap 1 GGAGGCGCGGCAGAA GGC-CGGCATCGGCGCGCCCGGC GAG GCCGACAGCCCCGTCGCCGTGCC CGACCTCAACAGCGC Swit_0917 1014366 - 1015526 + | peptidase M19, renal dipeptidase Swit_0918 1015523 - 1016824 + | major facilitator transporter Swit_0919 1018050 - 1016833 - | beta-lactamase Swit_0920 1020583 - 1018106 - | peptidase S45, penicillin amidase TERM 509 1019260 - 1019274 + g 70 -4.2 -4.43477 | TGGCCTTGCGCCAAT CCGAAA AAT TGTCGG TTTTCATTGCATGGA Swit_0921 1023281 - 1020612 - | TonB-dependent receptor, plug TERM 510 1021092 - 1021103 + g 73 -7.2 -4.11484 | CGCTATATCGAACCC GCGG CTGA CCGC TTTTCCCAGATTGCC TERM 511 1021528 - 1021504 - G 72 -8.5 -4.0616 | opp_overlap 1021525 GAGGTGAACGAGAAA TCGACCTTCGC GTA GCGGAGACCGA CGGTCGCCTTCAACT TERM 512 1021719 - 1021702 - G 70 -3.4 -4.41616 | overlap 1021705 1021707 ATCTGCGGAAAGAAA GGAGAC GATATG ATCTCC GTATCGACCTGCCGG TERM 513 1022285 - 1022274 - G 71 -2.2 -4.56597 | gap 1 GTCGCGGCGGAAAAA CGCGC TGA GC-CG CACCCCGAGCCGGTC Swit_0922 1024324 - 1023368 - | anti-FecI sigma factor, FecR Swit_0923 1024839 - 1024321 - | ECF subfamily RNA polymerase sigma-24 factor TERM 514 1025047 - 1025095 + r 74 -12.3 -3.41126 | overlap 1025050 GGATAAAGGGTGCGT AGTCGTTGACAGGCTGCGCGC CGGGAAA GCGCGCAGCCTGTCCGGGTCG TTCTAGAATTTATAC TERM 515 1025050 - 1025092 + r 87 -17 -2.85508 | overlap 1025047 TAAAGGGTGCGTAGT CGTTGACAGGCTGCGCGC CGGGAAA GCGCGCAGCCTGTCCGGG TCGTTCTAGAATTTA Swit_0924 1027485 - 1025098 - | TonB-dependent receptor Swit_0925 1028283 - 1027528 - | short-chain dehydrogenase/reductase SDR Swit_0926 1031043 - 1028407 - | regulatory protein, LuxR Swit_0927 1031238 - 1032656 + | amidase TERM 516 1032760 - 1032747 - g 78 -5.9 -4.62069 | opp_overlap 1032747 TCGGCACGGCAAAAA GCCGG AACC CCAGC ATGTTGTCGCGCGGC Swit_0928 1032677 - 1033567 + | polysaccharide deacetylase Swit_0929 1033586 - 1034305 + | short-chain dehydrogenase/reductase SDR Swit_0930 1036455 - 1034311 - | peptidase S15 Swit_0931 1038734 - 1036491 - | TonB-dependent receptor Swit_0932 1040074 - 1038818 - | Rieske (2Fe-2S) domain-containing protein TERM 517 1040671 - 1040701 + G 73 -10.3 -3.85698 | gap 1 CGCGCCCGAAGTGGC GGC-GCGCGCGGCC GACC GGCCGCTCGCCGAC TTTCTCGCCGGCGAG Swit_0933 1040159 - 1041040 + | LysR family transcriptional regulator Swit_0934 1041206 - 1042303 + | AraC family transcriptional regulator TERM 518 1042512 - 1042483 - f 89 -16.5 -3.53012 | gap 1 CGCCGCTGGTGGAAA CCCGGTCGGACCGC GAC GCGATC-GACCGGG CCGAGCGACGCGGCG TERM 519 1043619 - 1043659 + G 78 -17.6 -2.81464 | gap 1 CGGCGGCCGCCTGCC GCGC-GTGCCGGCGATGCT CGTC GGCCTTGCCGGCACCGCGC TGTCCTGCGTCCTGA Swit_0935 1042597 - 1044036 + | major facilitator transporter Swit_0936 1044076 - 1046190 + | peptidase S15 Swit_0937 1047108 - 1046200 - | prolyl aminopeptidase Swit_0938 1048970 - 1047135 - | X-Pro dipeptidyl-peptidase domain-containing protein Swit_0939 1051408 - 1049015 - | FAD dependent oxidoreductase TERM 520 1051507 - 1051520 + r 83 -5.2 -5.00616 | opp_overlap 1051494 1051507, overlap 1051494 AAGCGCGGGACCAGA GGCG GTCAGG CGCC TTTTTTAGGCGAAGC Swit_0940 1052399 - 1051512 - | methenyltetrahydrofolate cyclohydrolase purU 1053255 - 1052404 - | formyltetrahydrofolate deformylase Swit_0942 1053842 - 1053312 - | sarcosine oxidase, gamma subunit TERM 521 1053597 - 1053542 - G 95 -22.4 -3.01712 | gap 1, opp_overlap 1053579 CGGTCGCCTCGAACA TGCAGCGCCCGTCGCCGACGCCGACGC ACA GCGCCGCCG-CGGCGTCGGTCGCCGCC GCCTCGATCGCCGCG Swit_0943 1056759 - 1053835 - | glycine cleavage T protein (aminomethyl transferase) Swit_0944 1057052 - 1056756 - | sarcosine oxidase, delta subunit, heterotetrameric Swit_0945 1058318 - 1057062 - | sarcosine oxidase beta subunit family protein TERM 522 1057275 - 1057239 - G 72 -14.3 -3.16564 | opp_overlap 1057241 GCCGCAGTCGAGGAA CAGCCCCGGCACCGGCG ACG CGCCGATGATCGGGCTG CTGTCGGGGACGACG TERM 523 1057732 - 1057785 + g 74 -13.7 -3.28712 | gap 1, opp_overlap 1057757 ACGCCCAGCGCATCG GCGGCGCGGGCATAGCCCCACACCAC CGC GTCGTGCCGCGCGGTGCCCGC-CCGC TTCTGGAGCAGCCCG Swit_0946 1059010 - 1058390 - | TetR family transcriptional regulator Swit_0947 1059191 - 1059943 + | class II aldolase/adducin family protein Swit_0948 1060267 - 1059929 - | hypothetical protein Swit_0949 1061498 - 1060260 - | sulfite dehydrogenase (cytochrome) subunit SorA apoprotein Swit_0950 1062575 - 1061514 - | hypothetical protein Swit_0951 1062650 - 1063534 + | LysR family transcriptional regulator Swit_0952 1064388 - 1063531 - | hypothetical protein Swit_0953 1065228 - 1064464 - | CRP/FNR family transcriptional regulator Swit_0954 1065466 - 1065212 - | hypothetical protein Swit_0955 1065722 - 1066402 + | CRP/FNR family transcriptional regulator TERM 524 1066810 - 1066774 - f 90 -19.5 -2.71731 | opp_overlap 1066770 1066769 1066765 TCGATCTCTGAACCA CGGGCCCGTCCATAGAC GCG GTCTATGCACGGCCCCG CGCCATTTCGATTTT Swit_0956 1066881 - 1067333 + | dehydratase Swit_0957 1067525 - 1067884 + | hypothetical protein Swit_0958 1068594 - 1067944 - | butyryl-CoA:acetate CoA transferase Swit_0959 1069301 - 1068594 - | 3-oxoacid CoA-transferase, A subunit Swit_0960 1069389 - 1070276 + | LysR family transcriptional regulator Swit_0961 1070660 - 1070295 - | hypothetical protein Swit_0962 1071902 - 1070673 - | Rieske (2Fe-2S) domain-containing protein Swit_0963 1072409 - 1071933 - | hypothetical protein TERM 525 1072329 - 1072292 - G 72 -14.1 -3.13403 | gap 1, overlap 1072272 1072273 1072290 CGTCGTCGACGAACA GCTCG-CGCAGCGCCGCC GCA GACGGCCCCGCGTCGAAC GCCCGGCCGAGATCG TERM 526 1072460 - 1072429 - R 100 -13.6 -5.00884 | overlap 1072431 1072432 ACGCTCCGCAAAAAA CAGGGGGCGGGCCC GGCA AGGCCCGCCCCGTC GCCATCAGAAGGAAT TERM 527 1072458 - 1072431 - R 100 -16.2 -4.13561 | overlap 1072429 1072432 GCTCCGCAAAAAACA GGGGGCGGGCCC GGCA AGGCCCGCCCCG TCGCCATCAGAAGGA TERM 528 1072457 - 1072432 - R 93 -19.7 -3.07655 | overlap 1072431 1072429 CTCCGCAAAAAACAG GGGGCGGGCCC GGCA AGGCCCGCCCC GTCGCCATCAGAAGG Swit_0964 1074876 - 1072465 - | TonB-dependent receptor TERM 529 1073077 - 1073035 - G 80 -16.2 -3.14683 | overlap 1073070 ATAGTCGTTCAGGAA GGCGGCGCCGTTCAGCCGCA GCT TGCGGCCGAACAGGTCCGAC TTGAAGCCGACCTCA Swit_0965 1075261 - 1076427 + | formamidase Swit_0966 1076459 - 1077652 + | Rieske (2Fe-2S) domain-containing protein Swit_0967 1077670 - 1078047 + | hypothetical protein TERM 530 1078121 - 1078089 - g 100 -23.5 -3.05384 | CTGGCCCGGATCGAA GCGCGCGCCGAGATC ACC GATCTCGTCGCGCGC TACGCCCGGGGCGCC Swit_0968 1078044 - 1078532 + | hypothetical protein Swit_0969 1078529 - 1078834 + | Rieske (2Fe-2S) domain-containing protein Swit_0970 1079980 - 1078949 - | AraC family transcriptional regulator Swit_0971 1080752 - 1080012 - | Asp/Glu racemase Swit_0972 1081002 - 1081358 + | hypothetical protein Swit_0973 1081355 - 1082545 + | Rieske (2Fe-2S) domain-containing protein Swit_0974 1083448 - 1082549 - | LysR family transcriptional regulator Swit_0975 1083525 - 1084712 + | muconate cycloisomerase Swit_0976 1084712 - 1085002 + | muconolactone Delta-isomerase Swit_0977 1085033 - 1085965 + | catechol 1,2-dioxygenase Swit_0978 1086159 - 1086947 + | 3-oxoadipate enol-lactonase Swit_0979 1088375 - 1087119 - | OsmC family protein TERM 531 1088288 - 1088272 - G 70 -12.3 -3.35813 | overlap 1088282 CCGCAGGTGAAGCAA TGGGCGA AGA TCGCCCA GCCCCGCGCGGTCCC Swit_0980 1089399 - 1088449 - | AraC family transcriptional regulator Swit_0981 1092015 - 1089592 - | TonB-dependent receptor Swit_0982 1092554 - 1092171 - | OsmC family protein Swit_0983 1093861 - 1092611 - | FkbM family methyltransferase Swit_0984 1094607 - 1093969 - | membrane-like protein TERM 532 1094578 - 1094530 - G 80 -16.9 -3.14132 | overlap 1094516 1094515 GCTCGCCTCCATGAA GGCGAAGGCGGC-CAGCCACCAT TCGGC ATGGCGG-TGCGCCGCCTTGGCC ATCGTCCAGTCGTAC Swit_0985 1095158 - 1094685 - | AsnC family transcriptional regulator Swit_0986 1096242 - 1095253 - | AraC family transcriptional regulator Swit_0987 1096404 - 1097429 + | Nitrilase Swit_0988 1097469 - 1098500 + | phenylacetaldoxime dehydratase Swit_0989 1098719 - 1101061 + | TonB-dependent receptor TERM 533 1101070 - 1101104 + F 100 -17.8 -4.01047 | overlap 1101071 CTTCTGAGCCTGATG CTCCCCGGCCGGTTCG CAG CGGACCGGCCGGCGAC TTCTTCTTCGTCATT TERM 534 1101071 - 1101103 + F 100 -21.3 -2.99544 | overlap 1101070 TTCTGAGCCTGATGC TCCCCGGCCGGTTCG CAG CGGACCGGCCGGCGA CTTCTTCTTCGTCAT TERM 535 1101191 - 1101208 + F 73 -11.3 -3.58726 | opp_overlap 1101165 1101163 AGGCGGCCTGGTGGA TTCCCGC CTTC GCGGGAA TTGTCTCTCGGGAAA TERM 536 1101278 - 1101255 - f 86 -18.2 -2.62184 | TGGCTGGCGAGACGA GCTGCGGGGT GGCC ACCCCGCAGC TCGTGGCGGCAAGGC Swit_0990 1101426 - 1102382 + | transposase IS116/IS110/IS902 family protein Swit_0991 1102525 - 1104018 + | D-lactate dehydrogenase (cytochrome) TERM 537 1104890 - 1104914 + G 74 -14.9 -3.06796 | overlap 1104858 1104857 CGCGCTGCCGCCCTC CGCCGCGCCGG GTT TCGTCGCGGCG TTCGATCCGCTCGGC Swit_0992 1104018 - 1105190 + | FAD linked oxidase domain-containing protein Swit_0993 1105180 - 1106475 + | hypothetical protein Swit_0994 1107319 - 1106462 - | alpha/beta hydrolase fold Swit_0995 1107793 - 1107395 - | PRC-barrel domain-containing protein TERM 538 1107875 - 1107837 - R 73 -12.6 -3.1364 | gap 3, opp_overlap 1107844, overlap 1107829 1107842 GATGCAAGGATTCAA CCGAAGC-CGGCC--GGGA TCGT TCCCAAGGCCGTGCTTCGG CCGCCATTGTCCCAC Swit_0996 1108656 - 1107907 - | short-chain dehydrogenase/reductase SDR Swit_0997 1109858 - 1108656 - | cytochrome P450 Swit_0998 1110204 - 1109887 - | ferredoxin Swit_0999 1112386 - 1110218 - | TonB-dependent receptor TERM 539 1112715 - 1112735 + G 71 -10.3 -3.78775 | CAAGGACGCATTGCT CGACCGCGT GAA GCGCGGCCG TTTCCTGATCGACGG Swit_1000 1112692 - 1114176 + | aldehyde dehydrogenase TERM 540 1114407 - 1114367 - g 74 -14 -3.29471 | gap 2 GCTCGACCAGATCAA CCGCGCCACCGTGGCGAAGC TCG GCCTCGCCT-GG-AGCGCGG AGCTCGACAGCGACC Swit_1001 1114176 - 1116272 + | Pyrrolo-quinoline quinone Swit_1002 1116985 - 1116383 - | NAD-dependent epimerase/dehydratase Swit_1003 1118100 - 1116982 - | NADH:flavin oxidoreductase/NADH oxidase Swit_1004 1119233 - 1118097 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase Swit_1005 1120902 - 1119235 - | hypothetical protein Swit_1006 1122168 - 1120993 - | acetyl-CoA acetyltransferase TERM 541 1122260 - 1122244 - H 70 -7.3 -4.06491 | TCAATGTTAGATAAA CTTTCCG ATG CAGAAAG ATGGAGGAGCGGATG Swit_1007 1122273 - 1123010 + | short-chain dehydrogenase/reductase SDR Swit_1008 1123013 - 1123735 + | alpha/beta hydrolase fold TERM 542 1123741 - 1123765 + T 74 -9.3 -3.85165 | gap 1 GGAGCTCTGACGCGA GCGCCCTCCC CGGAAA GGGAGGG-GC TTTGCCTTTCGCCTC Swit_1009 1124561 - 1123782 - | short-chain dehydrogenase/reductase SDR Swit_1010 1126132 - 1124603 - | enoyl-CoA hydratase/isomerase Swit_1011 1127045 - 1126158 - | enoyl-CoA hydratase TERM 543 1126205 - 1126238 + g 83 -8.9 -4.56597 | gap 2 AGAAATCGGGCATGT CGGTCGAGACGCGGT CCGCGA ACCGCG-C-CGGCCG TTTTTCGAGGAAGGC TERM 544 1127257 - 1127241 - g 81 -2.2 -4.99861 | TATGAATGATAAAAA TCCGGA GGTGT TGCGGA TCGAACGGACCGACG TERM 545 1127592 - 1127640 + G 80 -16.6 -3.15544 | gap 1, overlap 1127637 CTTCGCCCTGGCGCT GGCGTCGGACATCCGCATCGCCG CGAC CGGCGC-GCGGATGAACGCCGCC TTCATCCGGCTCGGC Swit_1012 1127227 - 1128021 + | enoyl-CoA hydratase TERM 546 1128035 - 1128003 - T 74 -12.6 -3.28712 | opp_overlap 1127986, overlap 1128023 CGCCTTCCGGGAGAA GCGGCCGGCGCGCT ATTGA AGCGCGCCTATCGC CGCGCGTTGGCCAGC Swit_1013 1129189 - 1128029 - | acyl-CoA dehydrogenase domain-containing protein Swit_1014 1129995 - 1129186 - | enoyl-CoA hydratase/isomerase Swit_1015 1131212 - 1130007 - | hypothetical protein Swit_1016 1132756 - 1131233 - | AMP-dependent synthetase and ligase Swit_1017 1132942 - 1133592 + | TetR family transcriptional regulator Swit_1018 1134612 - 1133809 - | enoyl-CoA hydratase/isomerase Swit_1019 1136630 - 1134627 - | NADH:flavin oxidoreductase/NADH oxidase TERM 547 1136728 - 1136709 - g 70 -4.2 -4.46615 | gap 1, opp_overlap 1136709, overlap 1136710 GACGATGAAGGAAAA TGGCCATGG CCG CC-TGGCCC ACCCGGCCCGCCGTC Swit_1020 1136708 - 1137271 + | hypothetical protein Swit_1021 1138670 - 1137423 - | cytochrome P450 Swit_1022 1140881 - 1138728 - | TonB-dependent receptor Swit_1023 1142406 - 1141060 - | major facilitator transporter Swit_1024 1142767 - 1142408 - | limonene-1,2-epoxide hydrolase TERM 548 1142783 - 1142807 + H 75 -3.3 -4.84359 | overlap 1142786 1142787 GCTGCTCTCCCGCCT GGCCCGCGCCG CAT CGGCGCGCTTG TTTTTCTAACAGTGA TERM 549 1142786 - 1142804 + H 100 -11.6 -4.52873 | overlap 1142783 1142787 GCTCTCCCGCCTGGC CCGCGCCG CAT CGGCGCGC TTGTTTTTCTAACAG TERM 550 1142787 - 1142803 + H 84 -15.1 -3.31001 | overlap 1142786 1142783 CTCTCCCGCCTGGCC CGCGCCG CAT CGGCGCG CTTGTTTTTCTAACA Swit_1025 1142886 - 1143428 + | hypothetical protein Swit_1026 1144309 - 1143710 - | carboxymuconolactone decarboxylase Swit_1027 1144491 - 1145747 + | cytochrome P450 Swit_1028 1145744 - 1146511 + | short-chain dehydrogenase/reductase SDR Swit_1029 1147132 - 1146695 - | hypothetical protein Swit_1030 1147200 - 1148156 + | short-chain dehydrogenase/reductase SDR TERM 551 1148240 - 1148224 - g 72 -13.7 -3.15663 | ATCGAGCGGCATCAA CCTGGGC ATC GCCCAGG GGCTGGCGGCGGCCG Swit_1031 1148153 - 1148944 + | short chain dehydrogenase Swit_1033 1149705 - 1150547 + | alpha/beta hydrolase fold Swit_1034 1152101 - 1150563 - | AMP-dependent synthetase and ligase Swit_1035 1153024 - 1152098 - | palmitoyl-CoA hydrolase Swit_1036 1153257 - 1153982 + | nitroreductase Swit_1037 1155532 - 1154141 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Swit_1038 1156732 - 1155542 - | dehydrogenase catalytic domain-containing protein TERM 552 1155631 - 1155689 + g 90 -17.5 -3.40403 | gap 2, opp_overlap 1155609 CCGCCGCCCCGTCGA TCGCGCGATGGTCGCAG-GC-GAGGGTGA GCG TCACCTTCCGCACCGCGACCGGCGCGCCA TTCTCGTCGGCGCGG Swit_1039 1157699 - 1156725 - | transketolase, central region Swit_1040 1158700 - 1157696 - | dehydrogenase, E1 component Swit_1041 1159326 - 1158748 - | hypothetical protein Swit_1042 1159559 - 1160635 + | luciferase family protein TERM 553 1161117 - 1161090 - g 76 -13.4 -3.4072 | gap 1 GATCGGCGAGGACAA GCCGA-CCGCCCC GCC GGGGCTGCTCGGC GATCTCGCCAACGGT Swit_1043 1160638 - 1161798 + | L-carnitine dehydratase/bile acid-inducible protein F Swit_1044 1161847 - 1163844 + | NADH:flavin oxidoreductase/NADH oxidase Swit_1045 1163837 - 1164631 + | short-chain dehydrogenase/reductase SDR Swit_1046 1167138 - 1164733 - | hypothetical protein Swit_1047 1168630 - 1167188 - | hypothetical protein TERM 554 1168677 - 1168709 + H 71 -13.3 -3.04263 | overlap 1168681 CCGCCGCCGATCGTC CGCCCGCCGGCATGG CGT TCGTGCCGGGCGGCG TCTTCACCATGGGAT Swit_1048 1168688 - 1169602 + | hypothetical protein Swit_1049 1169653 - 1171134 + | amidohydrolase Swit_1050 1171605 - 1171174 - | AsnC family transcriptional regulator TERM 555 1172419 - 1172452 + G 71 -9.6 -3.76224 | gap 1 CCGAGGTCGAGCGGA TCGGCG-CGATGCTG CACGT CAGCCTCGACGTCGA TTTCCTCGATCCCAC Swit_1051 1171761 - 1172717 + | arginase Swit_1052 1172707 - 1173747 + | ornithine cyclodeaminase TERM 556 1173750 - 1173794 + F 100 -24.4 -3.5627 | overlap 1173749 1173751 GGAATATTGCTGACG GGCCGCAGCGTCACGGCC CTTCCCTTC GGCCGTGACGCTGCGGCG TTTAGCGACTAATCT TERM 557 1173751 - 1173793 + F 100 -27.9 -2.73441 | overlap 1173749 1173750 GAATATTGCTGACGG GCCGCAGCGTCACGGCC CTTCCCTTC GGCCGTGACGCTGCGGC GTTTAGCGACTAATC Swit_1053 1173819 - 1174586 + | TetR family transcriptional regulator Swit_1054 1176574 - 1174565 - | quinoprotein glucose dehydrogenase Swit_1055 1176815 - 1176576 - | biotin/lipoyl attachment domain-containing protein Swit_1056 1177822 - 1176830 - | transketolase domain-containing protein Swit_1057 1178829 - 1177834 - | pyruvate dehydrogenase (acetyl-transferring) TERM 558 1178295 - 1178305 + g 75 -8.2 -4.17048 | overlap 1178251 TCGCCGGGGTCGACA CGGC GTA GCCG TTGTTTTCGCACACG TERM 559 1178765 - 1178793 + g 73 -9.5 -3.86897 | overlap 1178767 TCGGCGAGGTCCTCG AACTGGCGGATGC GCT GCATCCGGCGGTA TTTCTCGAGGCTGCG TERM 560 1178767 - 1178791 + g 73 -12.1 -3.5241 | overlap 1178765 GGCGAGGTCCTCGAA CTGGCGGATGC GCT GCATCCGGCGG TATTTCTCGAGGCTG Swit_1058 1180138 - 1178840 - | peptidase M24 Swit_1059 1180595 - 1180140 - | hypothetical protein Swit_1060 1181446 - 1180655 - | short-chain dehydrogenase/reductase SDR Swit_1061 1181760 - 1181443 - | antibiotic biosynthesis monooxygenase Swit_1062 1181778 - 1183289 + | TPR repeat-containing protein Swit_1063 1185722 - 1183380 - | TonB-dependent receptor Swit_1064 1187575 - 1185998 - | glucose-methanol-choline oxidoreductase Swit_1065 1188117 - 1187572 - | hypothetical protein TERM 561 1187701 - 1187689 - G 73 -10.5 -3.82084 | opp_overlap 1187694, overlap 1187682 GGCGAACAGGAAGAA GCCGC CCG GCGGC CCCTGCCATCCGGTT Swit_1066 1190834 - 1188300 - | TonB-dependent receptor Swit_1067 1192345 - 1191266 - | vanillate monooxygenase TERM 562 1192224 - 1192209 - G 70 -9 -3.85698 | CGGTGCGGGCAGAAA TCGTCG AGCC CGACGA GCACGCCCGAAGCGC Swit_1068 1192469 - 1193410 + | LysR family transcriptional regulator TERM 563 1193731 - 1193763 + T 71 -9.1 -3.72324 | opp_overlap 1193739 CGCCCTTGGTGGTCA CGACGACAGGGAT ACTTGAG AACCCCGTCGTCG TTGTTCGTCGAAGTG Swit_1069 1194704 - 1193709 - | hypothetical protein TERM 564 1194969 - 1194923 - R 78 -12.2 -3.78775 | opp_overlap 1194931 GCGCCCATCAGGAAA CCGAACCAGGCGGCGCGCCT TGTTCTG AGCCGCTCCGTCCGGTTCAG CCCAAAAGAGCCTTA TERM 565 1195248 - 1195215 - R 81 -7.3 -4.4874 | gap 1, opp_overlap 1195240, overlap 1195216 CGCAAAAATCCAAAA GCGGCCGCCGGCCGAA TCA CTCGGG-AGCGGACGC CGCGTTGGCTGGTGC Swit_1070 1196676 - 1195483 - | 4-carboxymuconolactone decarboxylase / 3-oxoadipate enol-lactonase Swit_1071 1197825 - 1196680 - | fumarate lyase Swit_1072 1198526 - 1197822 - | protocatechuate 3,4-dioxygenase, alpha subunit Swit_1073 1199229 - 1198516 - | protocatechuate 3,4-dioxygenase, beta subunit Swit_1074 1200379 - 1199309 - | L-threonine aldolase Swit_1075 1202344 - 1200395 - | FAD dependent oxidoreductase Swit_1076 1204124 - 1202508 - | peptidase S10, serine carboxypeptidase Swit_1077 1206753 - 1204183 - | TonB-dependent receptor, plug TERM 566 1205201 - 1205163 - G 78 -5.8 -4.56775 | opp_overlap 1205178, overlap 1205164 1205165 1205188 1205189 AGCTGGTCGGAAAAA TTGCGACGAGCAGGTTCG AGA CGAAGCCGCCCGTCCCGG GCGTGATCGTGTCGA TERM 567 1205720 - 1205705 - G 75 -6 -4.44245 | opp_overlap 1205714, overlap 1205707 ATATTATCGACAAAA CCCGGC GTGC GCCGCG AATAGGCGTTGATGC Swit_1078 1207818 - 1206799 - | anti-FecI sigma factor, FecR TERM 568 1207059 - 1207020 - G 70 -9.3 -3.87815 | gap 1, overlap 1206995 1207021 GGCTATTCTCATAAA CCAGCCGCCCTTGCCG CCATGCGCC CGGCATGGG-GGCTGA CAGTCGGACGATCAG Swit_1079 1208461 - 1207811 - | ECF subfamily RNA polymerase sigma-24 factor Swit_1080 1209854 - 1208472 - | hypothetical protein TERM 569 1209825 - 1209781 - G 75 -10.6 -4.07885 | gap 1 GACTTTCCCGCAAAA GCCGGTCCGGTGAC-CAGCGC TGCG GCGCCGAGCCATCCGACCGTC CAGCGCACCCATGCT Swit_1081 1210136 - 1212340 + | TonB-dependent receptor TERM 570 1212985 - 1213021 + G 85 -17.3 -3.14683 | opp_overlap 1212973 GAAGGATAATGATTT CTGGTCGGTCGATGCCG ACG CGGAATCGATCGGCCGG TTCATCACCCAATAT Swit_1082 1212458 - 1214011 + | peptidase S10, serine carboxypeptidase Swit_1083 1214090 - 1215490 + | aldehyde dehydrogenase TERM 571 1216652 - 1216699 + G 72 -9 -4.0896 | gap 1, overlap 1216657 1216658 AGCGTTCCTAGCGGC CCCATACTCGACGCCGT-GCGCA CAA TGCGCAAAGGCGACGAGGTTGTG TTTTCAGGACAGTTT TERM 572 1216657 - 1216694 + G 73 -10.5 -3.95435 | gap 1, overlap 1216652 1216658 TCCTAGCGGCCCCAT ACTCGACGCCGT-GCGCA CAA TGCGCAAAGGCGACGAGG TTGTGTTTTCAGGAC Swit_1084 1216016 - 1216822 + | hypothetical protein Swit_1085 1217885 - 1217346 - | SCP-like extracellular Swit_1086 1219781 - 1217976 - | peptidase M24 TERM 573 1219947 - 1219922 - R 73 -8.9 -3.98016 | opp_overlap 1219926, overlap 1219873 1219924 1219926 AGGACGAAGAAAAGA GAGATCCCGGC TTTC GCCGGGATGAC GGGATGATTGCGCGC TERM 574 1219945 - 1219924 - R 70 -10.1 -3.56868 | opp_overlap 1219926, overlap 1219873 1219922 1219926 GACGAAGAAAAGAGA GATCCCGGC TTTC GCCGGGATG ACGGGATGATTGCGC TERM 575 1219943 - 1219926 - R 74 -12.7 -3.34106 | opp_overlap 1219926, overlap 1219873 1219924 1219922 CGAAGAAAAGAGAGA TCCCGGC TTTC GCCGGGA TGACGGGATGATTGC Swit_1087 1220513 - 1219965 - | carbonic anhydrase Swit_1088 1221043 - 1220513 - | GCN5-related N-acetyltransferase Swit_1089 1222077 - 1221040 - | delta-aminolevulinic acid dehydratase TERM 576 1221745 - 1221782 + g 78 -16.1 -3.01712 | ATTGTCGGGGTTGAG CGCCTCGCGCCCGTCGT CGCT GCGCCGGTCGCGCGGCG TGTTGGGGAACAGCG Swit_1090 1222235 - 1223137 + | diacylglycerol kinase, catalytic region Swit_1091 1224559 - 1223162 - | MATE efflux family protein Swit_1092 1227255 - 1224565 - | valyl-tRNA synthetase Swit_1093 1227916 - 1227299 - | hypothetical protein Swit_1094 1230210 - 1228168 - | peptidase S9 prolyl oligopeptidase TERM 577 1229950 - 1229974 + g 74 -13.5 -3.28712 | opp_overlap 1229936 1229935, overlap 1229936 GGCGGGACCGGACTC GCTCTTCGCCG GAT CGGCGGCGAGC TTCTCGGGAACCGCG Swit_1095 1230844 - 1230293 - | hypothetical protein Swit_1096 1232343 - 1230859 - | TolC family type I secretion outer membrane protein TERM 578 1232059 - 1232012 - G 74 -11.2 -3.72893 | gap 1 GAGTTGCGGACGAAA CCCCCCTGGTAGATCGGC-ACCG ACA CGGTCGCCGATCCGCCGAGCGAG CGCTTCGGCTGGGTG Swit_1097 1233004 - 1232360 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 579 1233434 - 1233394 - H 90 -14.1 -4.07568 | gap 1, opp_overlap 1233393 1233394 CCGTTTCGCGGAAAA GGCCGATCGCCCGT-CGG TGGGGG CCAAACGGACGATCGACC ATTTTCCATGCCCCG Swit_1098 1233649 - 1235436 + | hypothetical protein Swit_1099 1235563 - 1236570 + | signal transduction histidine kinase TERM 580 1237600 - 1237631 + G 71 -11.6 -3.6682 | CTGCTGGCGGCCTCG TCACTGATCTCGCC GATG GGCGATATCAGCGA TTTCGATCCCTCGCG TERM 581 1238394 - 1238436 + G 89 -18.3 -3.25823 | GCGGATGGCCGGATC GGCCGCGGCGCTCTACGGG CGCGA CCTGGTGAGCGCCGAGGCC TTCGTCTGGGCCGAC Swit_1100 1236880 - 1240029 + | hypothetical protein Swit_1101 1241105 - 1240227 - | phosphate ABC transporter, ATPase subunit Swit_1102 1241941 - 1241102 - | phosphate ABC transporter, inner membrane subunit PstA TERM 582 1241438 - 1241408 - G 77 -15.5 -3.21099 | CTTGCGGATCACGAA GGCGCGGC-TGGCGC CGA GCGCCATGCC-CGCC TCGCGCAGCGCGCTG Swit_1103 1242906 - 1241953 - | phosphate ABC transporter, inner membrane subunit PstC TERM 583 1242947 - 1242925 - R 89 -17 -3.17075 | opp_overlap 1242916 TCCCTTTCAAGGCAA CGGGGGCGAC GCT ATCGCCCCCG CTTCCCGCATCTGTG Swit_1104 1244026 - 1242977 - | phosphate ABC transporter, periplasmic phosphate-binding protein Swit_1105 1245755 - 1244319 - | amidohydrolase TERM 584 1245835 - 1245851 + GH 70 -8 -4.07568 | CGCGACGGATTATTT GGTCCA AAATA TGGACC TTTTAGCGGAAGGCG Swit_1106 1245739 - 1245978 + | hypothetical protein TERM 585 1245985 - 1246033 + FH 73 -13.3 -3.21276 | opp_overlap 1245985, overlap 1245983 CGGGCTTGACGAGAA TGTGACCGAGCGGTACGTG CCTGTTCATAC CACGTACCGATCTGTCACA TCTTGTCAGGGGACA TERM 586 1246033 - 1245985 - fH 76 -13.3 -3.40403 | opp_overlap 1245985 1245983 CGGGCTTGACGAGAA TGTGACCGAGCGGTACGTG CCTGTTCATAC CACGTACCGATCTGTCACA TCTTGTCAGGGGACA Swit_1107 1246056 - 1246427 + | hypothetical protein TERM 587 1246461 - 1246434 - T 73 -12.6 -3.17075 | CTCGCCTGAACCGAA CTCCCCGCCGGA TCCC TGCGGCGGGGCG GGGGGTGGGCACACG Swit_1108 1247157 - 1246708 - | activator of Hsp90 ATPase 1 family protein Swit_1109 1248484 - 1247240 - | RNA polymerase ECF-subfamily sigma factor TERM 588 1247623 - 1247639 + g 70 -12.3 -3.28712 | GATAGGGGCCGGGCC GGCGATG CCG CATCGCC TTGTCGAGCAGCGCC Swit_1110 1248861 - 1248481 - | DGPFAETKE family protein Swit_1111 1249068 - 1250123 + | hypothetical protein Swit_1112 1252103 - 1250133 - | peptidase S9 prolyl oligopeptidase TERM 589 1251260 - 1251273 + g 73 -9.5 -3.9461 | opp_overlap 1251260 GCGCGATGCGATAGA CGGCC TTGA GGCCG TTCTTCTTGCGGAAG Swit_1113 1252927 - 1252181 - | peptidase A24A, prepilin type IV Swit_1114 1256202 - 1253104 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Swit_1115 1256297 - 1256791 + | AsnC family transcriptional regulator TERM 590 1257033 - 1257008 - f 81 -6.9 -4.72986 | gap 1, opp_overlap 1257006 1257008 1257009, overlap 1257009 GAGGGGCACGAAAAA GTGG-CGATGAC GGT GTCATCGACCAG TCTTTCTGGTGCGCC Swit_1116 1257095 - 1260445 + | TonB-dependent receptor, plug TERM 591 1260495 - 1260468 - f 76 -8.2 -4.14243 | opp_overlap 1260470, overlap 1260469 GACCGCACCGGAAAA TGGGGGCTCCGC CACG GCGGGGCCCCTT TTTCGTTCCGGAACC TERM 592 1260470 - 1260493 + F 100 -17.4 -4.8622 | opp_overlap 1260469 1260468 CCGCACCGGAAAATG GGGGCTCCGC CACG GCGGGGCCCC TTTTTCGTTCCGGAA TERM 593 1260502 - 1260522 + F 74 -9 -3.91716 | overlap 1260503 GGGCCCCTTTTTCGT TCCGGAAC CTCCT GTTCCGGG TTGTTTCGGGACTGG Swit_1117 1260571 - 1261512 + | dienelactone hydrolase-like protein Swit_1118 1261527 - 1261958 + | hypothetical protein TERM 594 1262027 - 1262068 + T 71 -13.1 -3.05816 | gap 1 GGAGCCACTGAGCTT GGCGAAGTGGCGTCTCGAAG GCC CTTCGAGACGG-GCTTCGAC TTCGCTCAGCCCTCC Swit_1119 1265717 - 1262127 - | DNA polymerase III, alpha subunit Swit_1120 1267261 - 1265714 - | nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein Swit_1121 1267958 - 1267152 - | hypothetical protein Swit_1122 1268184 - 1268014 - | hypothetical protein TERM 595 1268235 - 1268209 - R 74 -13 -3.38991 | overlap 1268207 AGCCCTGCAACAATA GGGTGCGAATGC CTT GCATCCGCATCC CGCGTCAACCGTCGA Swit_1123 1268674 - 1268240 - | MerR family transcriptional regulator TERM 596 1268963 - 1268909 - g 78 -17.2 -2.75252 | gap 1, overlap 1268906 ATGACGTCAAGACGA CGCCGCAGGTCTTCATCGACGGCCG GCGGAT CGGCGGCC-ATGACGACCTGCGCCG CCATCTCGGCCTGAA Swit_1124 1268728 - 1269471 + | glutaredoxin Swit_1125 1270363 - 1269431 - | hypothetical protein TERM 597 1270388 - 1270413 + H 75 -4.5 -4.77567 | CCTATCGACAGGATC GCCGTCTGACC ATCC GGACAATCGGC TTTTATTGTCACCCT TERM 598 1270550 - 1270566 + G 78 -5.7 -4.56597 | CGGCCTCATCTATTC CGTCGTC ATG GGCGCCG TTTTTCGGACGAGGC Swit_1126 1270506 - 1271753 + | diguanylate cyclase Swit_1127 1272786 - 1271731 - | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada Swit_1128 1273151 - 1272876 - | hypothetical protein Swit_1129 1273705 - 1273184 - | hypothetical protein Swit_1130 1273891 - 1274349 + | ribose-5-phosphate isomerase TERM 599 1275101 - 1275077 - g 70 -12.7 -3.38272 | overlap 1275079 CACGACGACCCACAA GACGCTGCGCG GCC CGCGCGGCGGC ATGATCATGACCGAC TERM 600 1275099 - 1275079 - g 74 -13.9 -3.25896 | overlap 1275077 CGACGACCCACAAGA CGCTGCGCG GCC CGCGCGGCG GCATGATCATGACCG Swit_1131 1274346 - 1275662 + | serine hydroxymethyltransferase TERM 601 1275738 - 1275714 - g 80 -17.1 -2.91274 | GCCAGGTGAAGGACA GCCGCCCCACC GAC GACGGGGCGGC GATCCGGCGGCGACG Swit_1132 1275668 - 1276132 + | transcriptional regulator NrdR Swit_1133 1276129 - 1276890 + | tRNA/rRNA methyltransferase (SpoU) Swit_1134 1277041 - 1277988 + | hypothetical protein Swit_1135 1277991 - 1279013 + | hypothetical protein Swit_1136 1280835 - 1278988 - | hypothetical protein TERM 602 1280375 - 1280323 - G 74 -12.7 -3.54741 | gap 2, opp_overlap 1280323, overlap 1280313 GAGCAGGCCGGCAAA GCCGAGGCGCCGGTGCTGGACGGCG ACCAG CGC-GCCGAGCAGCGGC-CCCCAGC TCAGTTCCGAATGGG Swit_1137 1282279 - 1280828 - | hypothetical protein TERM 603 1281135 - 1281079 - G 70 -14.6 -2.74701 | gap 3 ACAGGCCGAAGATCA CCACCGAGCTGAGC-GCGCTGCCGGCC CCGAGC GGCCA-CAGCACCGC-CAGGTCGGTGG TGCGATAATCGCGGC Swit_1139 1283627 - 1283301 - | chorismate mutase Swit_1138 1282456 - 1283370 + | sterol desaturase-like protein rpsD 1283828 - 1284442 + | 30S ribosomal protein S4 TERM 604 1284490 - 1284471 - T 86 -16.4 -3.13343 | opp_overlap 1284471 ACGGGAACGAGCGAA GGGCGGCC CCAC GGCCGCCC TTTTCTTTTGGGGGT TERM 605 1284471 - 1284490 + T 100 -16.4 -5.08255 | opp_overlap 1284471 ACGGGAACGAGCGAA GGGCGGCC CCAC GGCCGCCC TTTTCTTTTGGGGGT Swit_1141 1285651 - 1284566 - | acyltransferase 3 TERM 606 1285737 - 1285701 - R 86 -18.1 -2.78816 | opp_overlap 1285701 GCACCCGCGAGCACA GGACGATCGCCGCCA TCAGCCC CGGCGACGATCGTCC TGCTTGCCCCTGCGG TERM 607 1285701 - 1285737 + r 78 -15.2 -2.72344 | opp_overlap 1285701 GCACCCGCGAGCACA GGACGATCGCCGCC ATCAGCCCC GGCGACGATCGTCC TGCTTGCCCCTGCGG Swit_1142 1286449 - 1285817 - | TetR family transcriptional regulator TERM 608 1286457 - 1286474 + H 76 -7.7 -4.27316 | CAGGTCATCTCAATG CCGTACT ATAT GGTACGG TTTTACGTTGACAAG Swit_1143 1286541 - 1288007 + | RND efflux system outer membrane lipoprotein Swit_1144 1288000 - 1289124 + | secretion protein HlyD family protein Swit_1145 1289130 - 1290653 + | EmrB/QacA family drug resistance transporter Swit_1146 1293081 - 1290676 - | ATP-dependent protease La Swit_1147 1293668 - 1293078 - | molecular chaperone (small heat shock protein)-like protein TERM 609 1294155 - 1294111 - g 71 -10.5 -3.73775 | opp_overlap 1294110 1294134 1294147 GTGATCGGCAGCAAA GACGCCGCGGTTAGCGACGGC AGC GCCTTCGCCCGCGACGGCATC GTCTGCTTCGCGATC Swit_1148 1293718 - 1295241 + | carboxylesterase, type B Swit_1149 1295316 - 1296719 + | FAD linked oxidase domain-containing protein TERM 610 1296928 - 1296900 - g 82 -15.9 -3.30771 | opp_overlap 1296924 CCATATCCGCGACAA CGGGCTGCGGGTC GGC GACACGCTGCCCG GCGAAGGCCATTTCG Swit_1150 1296772 - 1297545 + | GntR family transcriptional regulator Swit_1151 1298432 - 1297533 - | ROK family protein TERM 611 1298477 - 1298491 + H 76 -8.6 -4.21974 | opp_overlap 1298469, overlap 1298473 GATATCAGCCCGGAA TCGGTT CCA AACCGA TTTCTTCCATCGTCC TERM 612 1298554 - 1298598 + H 76 -8.7 -4.18018 | opp_overlap 1298554 1298559 CGCACTTGCAATATA TGTAACCGATCGGTACTTA CGGGTGA TACGTACCGTTCTGTTACA TTTTGCCTACACAGG TERM 613 1299866 - 1299813 - g 73 -16.6 -2.63631 | opp_overlap 1299834 CCAAGGTCCAGACCA TCGCCG-GCCGGATCGAGGCCACCGC CGTC GCGGCGGCCCCGG-CCGTCCCGGCGC CGATATCGTCACAGG Swit_1152 1298624 - 1299904 + | RND family efflux transporter MFP subunit TERM 614 1299976 - 1299918 - f 71 -13.7 -2.66598 | gap 2, overlap 1299917 1299955 GAACCAACCGACAAC CGCCCGCGCGGCGGCCTGACGCCCTTCCC GCG AGGAAGGGCGAGCGGCC-CCGCTCGCGC- CGGCGCCACAGGGGA TERM 615 1300226 - 1300175 - g 74 -15.8 -2.69151 | overlap 1300172 1300215 CCTCGGCAGAGACGA TCGCCGACACCGTCGCCTCCCCGC TGGA GCAGGAGATCAACGGCGTCGACGA CATGCTCTACATGTC TERM 616 1302621 - 1302654 + G 73 -10.2 -3.83155 | opp_overlap 1302612, overlap 1302624 GCAGAAGCTGGCCGG CAGCGCCGCGATGA TCGTCT TCGCCGCGGCGGTG TTGTTCGTCTTCCTG TERM 617 1302983 - 1303027 + G 77 -14.7 -3.21924 | overlap 1302978 1302983 TGCCGCTGGTGATCG CGACCGGGCCGGGCGCCGAGC TGC GCCAGGCGCTCGGCACGGCGG TCTTCTCCGGCATGC TERM 618 1302983 - 1303026 + G 77 -18 -2.5294 | gap 1, overlap 1302983 1302978 TGCCGCTGGTGATCG CGACCGGGCCGGGCGCCGAGC TGC GCCAGGCGCTCGGCACGG-CG GTCTTCTCCGGCATG Swit_1153 1300000 - 1303188 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Swit_1154 1303200 - 1304621 + | RND efflux system outer membrane lipoprotein Swit_1155 1304708 - 1306525 + | diguanylate cyclase TERM 619 1307230 - 1307182 - g 77 -15.2 -3.21099 | gap 1, opp_overlap 1307179, overlap 1307160 GGTCCGCACGACGAA GGCCGGCGACCTCGTCCGCCACG AATT CGAGGCG-ACGAAGCCGCTGCCC ACCTATCTGGTCGCC Swit_1156 1306601 - 1309228 + | peptidase M1, membrane alanine aminopeptidase-like protein Swit_1157 1310230 - 1309376 - | formyltetrahydrofolate deformylase Swit_1158 1310987 - 1310292 - | response regulator receiver protein TERM 620 1310562 - 1310578 + g 78 -12.3 -3.72576 | overlap 1310549 1310540 CTGGCCGCCTTCCGC CGCCGTT TGG AACGGCG TTTCGTCGCCGAGCC TERM 621 1311248 - 1311275 + G 71 -9.8 -3.70773 | gap 1 GCTGCTCGACTATGA GCTGCCCGACGCC AAC GGCTTCGGG-GGC TTCTTCCGTCTCCAG TERM 622 1311434 - 1311450 + G 82 -5.7 -4.7497 | CGGCATCGAGATCAT CCTGGGC GGC GGCCGGG TTTTTCCTGCCTCCG Swit_1159 1311072 - 1311701 + | two component LuxR family transcriptional regulator Swit_1160 1311698 - 1314187 + | multi-sensor hybrid histidine kinase Swit_1161 1314184 - 1314564 + | response regulator receiver protein Swit_1162 1314758 - 1320490 + | alpha-2-macroglobulin domain-containing protein TERM 623 1321484 - 1321427 - g 82 -16.3 -3.28924 | gap 1, opp_overlap 1321434 GATCGTCCTCGACAA CGCCACCGGCGACACGCTCGCCTA TGTCGGCGGGG TCGGCG-GCGCGTCGACGGCGGCG GCGGTCGACGGCGCC Swit_1163 1320501 - 1322618 + | penicillin-binding protein 1C Swit_1164 1323463 - 1322657 - | hypothetical protein Swit_1165 1323903 - 1323460 - | AsnC family transcriptional regulator TERM 624 1324049 - 1324065 + G 71 -10.8 -3.61398 | GCTATCAGGGCCGGA CGCCGG ACGGA CCGGCG TTGTTGCCGGAGACG Swit_1166 1323964 - 1326429 + | transketolase, central region Swit_1167 1326597 - 1327601 + | AraC family transcriptional regulator TERM 625 1328715 - 1328705 - g 83 -4.6 -4.91109 | overlap 1328707 CGGCTATGAGAAAAA CACC AAG GGCG TCAAGCAACTCAGCA Swit_1168 1327866 - 1328966 + | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein TERM 626 1330359 - 1330346 - g 71 -2.4 -4.54821 | overlap 1330332 AGCGGAACGATAAAA TCCT TCAGCC AGGA GCTTCGCATCGCCAA Swit_1169 1329254 - 1331683 + | TonB-dependent receptor TERM 627 1331725 - 1331697 - f 83 -17.5 -2.52543 | opp_overlap 1331697 1331701 AGTCGCGTCAACGCA CATCCGCCGGC TCGCAAC GCCGGCGGATG GCGGGCGTGACGCGC TERM 628 1332454 - 1332487 + G 72 -6 -4.2803 | gap 2 CCGAGAACGAGATAT TGCCGATCCAGCGCGA ACTT TCGCGC-GGG-CGCCA TTTTGCCTTCGACTG TERM 629 1332679 - 1332726 + G 72 -15.5 -2.95091 | TGTTCAGCGTCGGCA GCCATGCCGCGGC-GCAGGCCGC CGTC GCGGCCGGCCGACG-GGCCTGGC TCTATCGCTTCGACT Swit_1170 1331859 - 1333001 + | carboxylesterase, type B Swit_1171 1332998 - 1333408 + | endoribonuclease L-PSP TERM 630 1333513 - 1333471 - T 91 -17.6 -3.28791 | opp_overlap 1333510, overlap 1333474 ATCGCCTGCCCATAA GACGTCGGGCCGGAGGCGGA CTG TCCGCTCCCGGCCCGATCCC GTAGCCATCGCGGGG TERM 631 1333510 - 1333474 - T 90 -20.1 -2.52623 | overlap 1333471 GCCTGCCCATAAGAC GTCGGGCCGGAGGCGGA CTG TCCGCTCCCGGCCCGAT CCCGTAGCCATCGCG Swit_1172 1334440 - 1333553 - | OmpA/MotB domain-containing protein TERM 632 1334621 - 1334646 + r 76 -14 -3.16055 | gap 1, opp_overlap 1334580, overlap 1334611 CGCCCCGCTACACGG CCGCCCGGACG ATCGG CG-CCGGGCGG TTGATGAAGGATTTG Swit_1173 1335092 - 1334613 - | AsnC family transcriptional regulator TERM 633 1336556 - 1336533 - g 72 -6.6 -4.26344 | overlap 1336519 ACAGCTCGACGAAAA CGCCCGAG GGGTCGAT CGCGGGCG GCGGCATCGGCTGCC Swit_1174 1335209 - 1338682 + | 2-oxoacid ferredoxin oxidoreductase TERM 634 1338804 - 1338750 - g 73 -12.1 -3.53012 | gap 2, overlap 1338751 CCGCCCCCGCCGAAA CCGCCATCCGCCGCGCGCGCGCGCAGT CGA ACCG-GCGCAT-CGCGGCGCATGACGC GGACGGCGCGGTCGC TERM 635 1338803 - 1338751 - g 70 -15.6 -2.71712 | gap 2, overlap 1338750 CGCCCCCGCCGAAAC CGCCATCCGCCGCGCGCGCGCGCAGT CGA ACCG-GCGCAT-CGCGGCGCATGACG CGGACGGCGCGGTCG Swit_1175 1338722 - 1339123 + | hypothetical protein TERM 636 1339698 - 1339751 + G 100 -17.4 -4.07885 | GATCCCCGGACGCTG GCCCGCGCCGGCGT-CGACATCGCCG TGCT CGGCGG-GTCGAAGGCCGGCGCGCCC TTTTCCGAGGCGATC Swit_1176 1339128 - 1340150 + | L-threonine aldolase Swit_1177 1341088 - 1340210 - | S-formylglutathione hydrolase TERM 637 1341100 - 1341076 - G 100 -20.7 -3.75153 | TTCCTTCAAGGCAAA GGGGCGCAGGC ATC GCCCGCGCCCC CGTCAGTGCCCGCCG Swit_1178 1341519 - 1341121 - | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1179 1342660 - 1341548 - | S-(hydroxymethyl)glutathione dehydrogenase Swit_1180 1342756 - 1343736 + | LysR family transcriptional regulator Swit_1181 1345170 - 1343752 - | NAD(P)(+) transhydrogenase (AB-specific) Swit_1182 1345483 - 1345193 - | NAD/NADP transhydrogenase alpha subunit-like protein Swit_1183 1346639 - 1345506 - | NAD(P) transhydrogenase subunit alpha Swit_1184 1346787 - 1346644 - | hypothetical protein Swit_1185 1346944 - 1348386 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 638 1348421 - 1348438 + F 76 -14.1 -3.20901 | opp_overlap 1348414 1348413 CCTCAAACGCCGGGC GCCGGGC ATCC GCCCGGC TTGGCTTCCTCGCAT Swit_1186 1348526 - 1349656 + | chalcone/stilbene synthase domain-containing protein Swit_1187 1349656 - 1350366 + | methyltransferase type 12 Swit_1188 1350345 - 1351481 + | monooxygenase, FAD-binding Swit_1189 1351942 - 1351445 - | activator of Hsp90 ATPase 1 family protein Swit_1190 1352270 - 1351926 - | ArsR family transcriptional regulator TERM 639 1352341 - 1352311 - R 100 -16.1 -5.4588 | overlap 1352313 TAAAAGGACAAAAAA TACCCCGGCGGAC GCGCG GCCCGCCGGGGTG ATCGATCAGTAGCGG TERM 640 1352339 - 1352313 - R 100 -18.7 -4.32919 | overlap 1352311 AAAGGACAAAAAATA CCCCGGCGGAC GCGCG GCCCGCCGGGG TGATCGATCAGTAGC Swit_1191 1354581 - 1352347 - | TonB-dependent receptor TERM 641 1354549 - 1354539 - G 76 -2.4 -4.7254 | AGTCTCGACGAAAAA GGGG AAG CCCG GTGCGGATGCTGATG Swit_1192 1354664 - 1355071 + | hypothetical protein Swit_1193 1355074 - 1356075 + | cytochrome-c peroxidase Swit_1194 1356107 - 1356667 + | deaminase-reductase domain-containing protein Swit_1195 1356921 - 1356664 - | hypothetical protein TERM 642 1356999 - 1356950 - R 73 -12.8 -3.15249 | gap 1, opp_overlap 1356961 CACAGCCCGTATGAA CGTCAGATGTCGGTCAGCGTCGC GACCA GCG-CGCGGACCTTCTTCTGACG CCATTGCGGGGTCGG TERM 643 1356961 - 1356988 + r 71 -9.1 -3.79113 | gap 1, opp_overlap 1356950 TGAACGTCAGATGTC GGTCAGCGTCGC GACCA GCG-CGCGGACC TTCTTCTGACGCCAT Swit_1196 1357737 - 1356952 - | LysR family transcriptional regulator apaG 1358157 - 1357753 - | ApaG Swit_1198 1359398 - 1358154 - | cystathionine gamma-synthase Swit_1199 1359521 - 1360069 + | glutathione peroxidase Swit_1200 1360489 - 1360076 - | globin Swit_1201 1361851 - 1360574 - | UDP-glucose/GDP-mannose dehydrogenase Swit_1202 1362985 - 1361879 - | NAD-dependent epimerase/dehydratase Swit_1203 1363024 - 1364022 + | agmatine deiminase Swit_1204 1364036 - 1364884 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 644 1364991 - 1364935 - g 74 -13.6 -3.35992 | overlap 1364936 ATGCACGCCAAGGAA GGCCGCGA-CGCCGAGCTCGAGACCGCG CTG CGCGACCTCGC-CGCGGCGGTCGCCGGC TTCGCCGGCTCCGAG TERM 645 1364991 - 1364936 - g 73 -16.9 -2.61274 | gap 3, overlap 1364935 TGCACGCCAAGGAAG GCCG-CGA-CGCCGAGCTCGAGACCGCG CTG CGCGACCTCGC-CGCGGCGGTCGCCGGC TTCGCCGGCTCCGAG Swit_1205 1364896 - 1365189 + | antibiotic biosynthesis monooxygenase Swit_1206 1366640 - 1365375 - | sodium:dicarboxylate symporter TERM 646 1366806 - 1366782 - H 75 -3.5 -4.82901 | overlap 1366784 1366803 TGTTCTTGACAAAAA GACGTTCCC GCTCTAT AGGAACGGC CCATTGACCGAGGCC Swit_1207 1366827 - 1367411 + | hypothetical protein Swit_1208 1367408 - 1367827 + | hypothetical protein TERM 647 1368077 - 1368059 - g 79 -14.6 -3.36327 | overlap 1368062 GGACGGGATCGACAA GAAGGCGG TGA CCGCCTTC ACCCTGGCCTTCCTC TERM 648 1368074 - 1368062 - g 73 -10.5 -3.8211 | overlap 1368059 CGGGATCGACAAGAA GGCGG TGA CCGCC TTCACCCTGGCCTTC Swit_1209 1367877 - 1369223 + | major facilitator transporter Swit_1210 1370260 - 1369343 - | cysteine synthase Swit_1211 1371546 - 1370257 - | major facilitator transporter Swit_1212 1374314 - 1371636 - | ATP-dependent DNA helicase UvrD TERM 649 1374019 - 1373993 - G 100 -20.8 -5.36441 | overlap 1374010 CCCCGACAGAAAAAA CCCCGGCCGGGG ACA CACCGGCCGGGG CAGCGGAAGCGGGTT TERM 650 1374565 - 1374590 + H 80 -5.4 -4.89852 | AGCATCTTCGTTCCC TGATTGGCCG ACGCGC CGGCGAGTCA TTTTTCTGCATATAC Swit_1213 1374650 - 1374901 + | hypothetical protein Swit_1214 1374891 - 1375169 + | hypothetical protein Swit_1215 1375818 - 1375324 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Swit_1216 1376835 - 1376005 - | hypothetical protein Swit_1217 1377598 - 1377122 - | hypothetical protein Swit_1218 1379080 - 1377620 - | TPR repeat-containing protein TERM 651 1377860 - 1377890 + g 74 -11 -3.68222 | opp_overlap 1377876 CGGCATGCTCCACTC GCCGGCGCTCAGCG AAG CCTTGGGCGCGGGC TTCTTGCCCTTGCCG Swit_1219 1379733 - 1379092 - | hypothetical protein Swit_1220 1379898 - 1380596 + | uracil-DNA glycosylase superfamily protein Swit_1221 1380628 - 1380936 + | septum formation initiator Swit_1223 1381538 - 1381233 - | addiction module antitoxin TERM 652 1381795 - 1381779 - g 71 -2.1 -4.58395 | overlap 1381758 1381753 1381780 CGCAGCGGCCAAAAA GGCCGCG CCG CGCAAAC CCGCATCTCCAAGGG Swit_1224 1381741 - 1382871 + | pyruvate dehydrogenase (acetyl-transferring) TERM 653 1383247 - 1383217 - g 71 -9.7 -3.79071 | overlap 1383218 CGCACAAGATGGAAA GCG-GCGCGCGCGAC CTG GTCGCG-GCGGTCGC CGACACCCGCGACGA Swit_1225 1382871 - 1384271 + | pyruvate dehydrogenase subunit beta TERM 654 1384299 - 1384311 + F 76 -5.5 -4.56597 | overlap 1384273 1384289 1384299 CGGCGGGGCGGTCGG CCCTT TCT AGGGG TTTTTGCGGACCGCC TERM 655 1384380 - 1384347 - f 74 -12.5 -3.28712 | opp_overlap 1384349 GCCGTTCTGTGATAA TGGTCCCCAACCG GTCCGAGT CGGTTGGGGACTA TGCTCATGGAACAGA TERM 656 1384349 - 1384378 + F 81 -16.5 -2.82516 | opp_overlap 1384347 CGTTCTGTGATAATG GTCCCCAACCGGT CCGA GTCGGTTGGGGAC TATGCTCATGGAACA Swit_1226 1384371 - 1384823 + | response regulator receiver protein TERM 657 1385166 - 1385217 + GF 73 -12.8 -3.14344 | opp_overlap 1385142 GGGCGAGGCGCAGAT CGTCGCCCATGGCGAGGAGCGCGG CGGC CCGCTGTTCGCGCTGTCGGCGGCG TTGCTCGGCGCGGTG Swit_1227 1384735 - 1385505 + | hypothetical protein Swit_1228 1385541 - 1385978 + | signal transduction protein Swit_1229 1385980 - 1386609 + | hypothetical protein Swit_1230 1387720 - 1386665 - | hypothetical protein Swit_1231 1388748 - 1387909 - | prolipoprotein diacylglyceryl transferase TERM 658 1388365 - 1388308 - G 71 -2.6 -4.57073 | gap 3 GATGCGGCCGAAAAA CAGCCCGAAC-GGC-GCGCAGCAGGCGAC ATA GTCGTG-GATGCGCAGCCAGCTCAGCCCG TTGCGGCGCGCCATG Swit_1232 1389250 - 1388831 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Swit_1233 1389297 - 1389728 + | hypothetical protein Swit_1234 1389725 - 1390315 + | OmpA/MotB domain-containing protein Swit_1235 1392480 - 1390465 - | stage II sporulation E family protein Swit_1236 1393618 - 1392656 - | beta-lactamase superfamily hydrolase Swit_1237 1393982 - 1393644 - | anti-sigma-factor antagonist TERM 659 1394115 - 1394149 + r 100 -28.8 -3.04144 | CCGCGCGGGCTGATA CCGATGGGCGATGAGC CAG GCTCATCGCCCATCGG TATTACGGGTCCAGC Swit_1238 1394850 - 1394152 - | glutamine amidotransferase Swit_1239 1395349 - 1394969 - | hypothetical protein Swit_1240 1395365 - 1395844 + | hypothetical protein Swit_1241 1396969 - 1396502 - | hypothetical protein Swit_1242 1397928 - 1396966 - | hypothetical protein Swit_1243 1399494 - 1398091 - | 2-nitropropane dioxygenase, NPD Swit_1244 1400743 - 1399601 - | glycosyl transferase, group 1 Swit_1245 1401620 - 1400748 - | alpha/beta hydrolase fold Swit_1246 1401658 - 1403082 + | hypothetical protein Swit_1247 1403237 - 1404250 + | hypothetical protein Swit_1248 1404837 - 1404346 - | methylated-DNA--protein-cysteine methyltransferase Swit_1249 1406111 - 1404969 - | chaperone protein DnaJ TERM 660 1405170 - 1405227 + g 71 -10.6 -3.78934 | gap 3, overlap 1405167 1405156 CGGCATGCCGGCGCC GCGCTGGCG-GATCTGCTTGCCCGACTGG ATG CCGG-CGGGGATGCGGATCTCG-TGGCGC TTCTTGTCGAGGCCG TERM 661 1406220 - 1406195 - R 90 -18.3 -2.88999 | TTGCCAGACATTACA CGGCCCCGCCA TCGC TGACGGGGCCG GTAAGGTCACGGCAT Swit_1250 1408138 - 1406246 - | chaperone protein DnaK Swit_1251 1408299 - 1408751 + | hypothetical protein Swit_1252 1408751 - 1409677 + | hypothetical protein Swit_1253 1410373 - 1409828 - | GrpE protein TERM 662 1410179 - 1410194 + g 84 -10.4 -4.48987 | GCCGGTCGCGGCATA GGCCGA GGCG TCGGCC TTTTCCTTCTCCAGC Swit_1254 1410501 - 1411610 + | 8-amino-7-oxononanoate synthase bioD 1411607 - 1412236 + | dithiobiotin synthetase Swit_1256 1412233 - 1413486 + | adenosylmethionine--8-amino-7-oxononanoate transaminase Swit_1257 1413483 - 1413617 + | hypothetical protein Swit_1258 1413679 - 1414548 + | hypothetical protein TERM 663 1414553 - 1414608 + T 78 -11.9 -3.81488 | gap 2, overlap 1414565 1414599 TCGACGCCTGATTCC CGTCGC-CCGTG-CTCGTCATCCTGGC AAAA GCCGGAATGACGATTTACGGAGCGCCG TTCTGTTTCCCCGCC TERM 664 1414565 - 1414594 + T 76 -12.9 -3.53091 | overlap 1414553 TCCCGTCGCCCGTGC TCGTCATCCTGGC AAAA GCCGGAATGACGA TTTACGGAGCGCCGT Swit_1259 1415600 - 1414596 - | OmpA/MotB domain-containing protein Swit_1260 1416495 - 1415632 - | flagellar motor protein MotA TERM 665 1415833 - 1415775 - G 72 -14.5 -2.90212 | gap 2 TGACCACGCCATAGA TGGCGCCGTCGGCCTCGATCACCTGGCGG CAG CGGCC-GGCGAAGG-GGCCGACGATGCCA TAAGCGAGCAACACG Swit_1261 1417462 - 1416605 - | flagellin domain-containing protein TERM 666 1417005 - 1416982 - G 74 -14.6 -3.02144 | gap 1 CGAGGCCGTCGAACA CGGTCGACCGC TGC GCGGTCG-CCG CCAGCCGCACCGTCG Swit_1262 1418827 - 1417475 - | flagellar hook-associated protein FlgK Swit_1263 1419192 - 1418824 - | rod binding-like protein flgI 1420292 - 1419189 - | flagellar basal body P-ring protein TERM 667 1419461 - 1419489 + g 72 -13.2 -3.14344 | gap 2 TCTTGCCATGGGTGA CGGCGACCGGTGCG ATC CGCACCG--CGCCG TTGATCACGACGGTG TERM 668 1419651 - 1419669 + g 72 -13.8 -3.14132 | GATCGAGCGGGCGAT CGGCTGGC CGA GCCGGCCG TTGATCGCGGCGGCG Swit_1265 1421002 - 1420319 - | flagellar L-ring protein flgG 1421771 - 1420983 - | flagellar basal body rod protein FlgG Swit_1267 1422536 - 1421793 - | flagellar basal-body rod protein FlgF Swit_1268 1423873 - 1422566 - | flagellar basal body FlaE domain-containing protein TERM 669 1423752 - 1423803 + g 73 -13 -3.39784 | gap 1, opp_overlap 1423747 1423750, overlap 1423750 GAGGAGGAGACGAGG TCGCCGAACTCGGTGCCGCTGCGCT TGA AGC-CGGTGGTGCCGACATTGGCGA TGTTGTTCGAGATGA Swit_1269 1424577 - 1423897 - | flagellar hook capping protein Swit_1270 1424978 - 1424574 - | flagellar basal-body rod protein FlgC Swit_1271 1425328 - 1424981 - | flagellar basal-body rod protein FlgB Swit_1272 1425547 - 1426233 + | MotA/TolQ/ExbB proton channel Swit_1273 1426230 - 1426730 + | hypothetical protein Swit_1274 1426894 - 1427469 + | hypothetical protein Swit_1275 1427535 - 1427819 + | putative anti-sigma-28 factor, FlgM Swit_1276 1427816 - 1428133 + | hypothetical protein Swit_1277 1429044 - 1428112 - | hypothetical protein Swit_1278 1430356 - 1429061 - | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 670 1429469 - 1429427 - G 74 -14.1 -3.25823 | gap 1 GCGGCCGGACAGGAA GCGCAC-CACCGCCAGCGCG TTCT CGCAATGGCGGGGCATGCGC AGCGGCAGCGTCTCC flhA 1430584 - 1432731 + | flagellar biosynthesis protein FlhA Swit_1280 1432728 - 1433585 + | cobyrinic acid a,c-diamide synthase Swit_1281 1433575 - 1434303 + | RNA polymerase, sigma 28 subunit, FliA/WhiG Swit_1282 1435088 - 1434327 - | hypothetical protein TERM 671 1435163 - 1435128 - R 100 -23.2 -3.97741 | opp_overlap 1435128 1435162 AAATCTCAAGAACAA GGCCCCCGGCGCGGGG GAAA CGCTGCGCCGGGGGCC TGTCTGGAGGGGCGG TERM 672 1435128 - 1435163 + r 100 -25.4 -2.87132 | opp_overlap 1435128, overlap 1435162 AAATCTCAAGAACAA GGCCCCCGGCGCGGGG GAAA CGCTGCGCCGGGGGCC TGTCTGGAGGGGCGG Swit_1283 1436030 - 1435209 - | flagellin domain-containing protein TERM 673 1436448 - 1436407 - R 100 -26.7 -4.07568 | CTGCGCGCCCCAAAA CCGAAACGACCCCCGATGC GGAT GCACCGGGGGCCGTCTCGG CCAGCAAGTGATGAG Swit_1284 1437294 - 1436473 - | flagellin domain-containing protein TERM 674 1437642 - 1437684 + H 78 -14.2 -3.09983 | gap 3, overlap 1437637 AGGCCTCTTCGCGCG CC-CGCG-TGCGACGGGCACG GGTC CGGGCCCG-CGCAGCGCGCGG TCTATTAAGACTTTT TERM 675 1437684 - 1437695 + H 75 -4.4 -4.7629 | overlap 1437637 CCCGCGCAGCGCGCG GTCT ATTA AGAC TTTTTAAGTTAATCC Swit_1285 1437776 - 1439053 + | sigma-54 dependent trancsriptional regulator TERM 676 1439194 - 1439139 - g 79 -14.5 -3.28924 | gap 1, overlap 1439124 1439140 CAGCGCCTTGCAGAA GGCCGCCG-CCGCGCCCGCGCCGAAC CCGCT GACGGGCGCCGGCGCGATCGGCAGCG CCACCGCCGCGCCCG TERM 677 1439193 - 1439140 - g 77 -18 -2.57211 | gap 1, overlap 1439124 1439139 AGCGCCTTGCAGAAG GCCGCCG-CCGCGCCCGCGCCGAAC CCGCT GACGGGCGCCGGCGCGATCGGCAGC GCCACCGCCGCGCCC Swit_1286 1439065 - 1439430 + | flagellar hook-basal body complex subunit FliE Swit_1287 1439434 - 1441170 + | flagellar M-ring protein FliF Swit_1288 1441175 - 1442209 + | flagellar motor switch protein FliG Swit_1289 1442202 - 1442855 + | hypothetical protein Swit_1290 1442914 - 1444212 + | FliI/YscN family ATPase Swit_1291 1444209 - 1444637 + | hypothetical protein Swit_1292 1444639 - 1446297 + | flagellar hook-length control protein Swit_1293 1446325 - 1446924 + | flagellar basal body-associated protein FliL TERM 678 1446952 - 1446975 + F 100 -17.4 -4.72272 | opp_overlap 1446952 AGCGTAGCGACATGA GCCCCCGGGT TTCC GCCCGGGGGC TTTTTCGTGCGCGCG TERM 679 1446975 - 1446952 - f 80 -16.7 -2.64735 | opp_overlap 1446952 AGCGTAGCGACATGA GCCCCCGGG TTTCCG CCCGGGGGC TTTTTCGTGCGCGCG Swit_1294 1447081 - 1447233 + | hypothetical protein Swit_1295 1447260 - 1447538 + | hypothetical protein TERM 680 1447567 - 1447540 - T 100 -21.4 -4.40184 | GGAAGGAAACATAAA CGTCACCCCAGC CTGC GCTGGGGTGACG TGGAGAGGAGAGAGG Swit_1296 1448998 - 1447607 - | dihydrolipoamide dehydrogenase Swit_1297 1450262 - 1449012 - | 2-oxoglutarate dehydrogenase E2 component TERM 681 1449179 - 1449213 + g 77 -15 -3.21416 | CCGGGCGCTCCTCGA TCCGGTGCAGGCCG AGCACGC CGGCCTGCGGCGGA TTGATGATCGGAGTC kgd 1453176 - 1450264 - | alpha-ketoglutarate decarboxylase TERM 682 1452928 - 1452904 - G 70 -14.9 -2.71791 | overlap 1452903 AGCCGGCGCCGAAAC GGCCGGCGCGG GTG CCCCACCGGCC TTGGCCGGCTTGGCG TERM 683 1453296 - 1453270 - R 71 -11.5 -3.53761 | gap 1, opp_overlap 1453270 1453272 1453274, overlap 1453271 TAACCTGGCGTGAAA CGCCGCCCCGCC GGAT GGCGGGGCTG-G TATTTTTTAACCCTT TERM 684 1453270 - 1453298 + r 100 -10.2 -5.055 | gap 1, opp_overlap 1453270 1453271, overlap 1453272 1453274 TAACCTGGCGTGAAA CGCC-GCCCCGCC GGAT GGCGGGGCTGGTA TTTTTTAACCCTTCA TERM 685 1453272 - 1453296 + r 100 -15 -4.15235 | gap 1, opp_overlap 1453270 1453271, overlap 1453270 1453274 ACCTGGCGTGAAACG CC-GCCCCGCC GGAT GGCGGGGCTGG TATTTTTTAACCCTT TERM 686 1453274 - 1453293 + r 84 -16.4 -3.08977 | opp_overlap 1453270 1453271, overlap 1453272 1453270 CTGGCGTGAAACGCC GCCCCGCC GGAT GGCGGGGC TGGTATTTTTTAACC TERM 687 1453327 - 1453360 + r 86 -16.7 -3.14211 | CAGAACCTCCGCCAG GGTCGTGCCGAGCTC CGAG GGGCTCGCCGCGACC TTGATGCCCGCCGCT Swit_1299 1454187 - 1453303 - | succinyl-CoA synthetase (ADP-forming) alpha subunit TERM 688 1453516 - 1453536 + g 88 -14.7 -3.71848 | GCCGCGCTTCGCCTC GTCGCGCAG GAA CTGCGCGGC TTCTTCCTCGGCCGA Swit_1300 1455201 - 1454239 - | malate dehydrogenase (NAD) TERM 689 1454757 - 1454785 + g 70 -12.3 -3.28712 | overlap 1454760 CGAAGCGCGCCGAGT CGAGGACGCCGGC CAT GCCGACGACCTTG TTGTGCGGCAGGCCC TERM 690 1454760 - 1454782 + g 71 -10.4 -3.78934 | overlap 1454757 AGCGCGCCGAGTCGA GGACGCCGGC CAT GCCGACGACC TTGTTGTGCGGCAGG TERM 691 1455257 - 1455234 - H 72 -11.6 -3.27766 | overlap 1455221 AAGATCGCATAGGAA GGCGCCCACG CGAT CGCGGCCGCC AGAATTGCGACGCCC Swit_1301 1455465 - 1458434 + | hypothetical protein Swit_1302 1459623 - 1458505 - | AFG1 family ATPase Swit_1303 1460069 - 1459620 - | thioesterase superfamily protein sdhB 1460874 - 1460089 - | succinate dehydrogenase iron-sulfur subunit TERM 692 1461993 - 1462040 + G 75 -16.9 -2.88544 | gap 1, overlap 1462002 TGCACCATCGCCGGC GGCGGCC-GGGCGCTGCTCGCG CTGTT CGGCAGCGGCGCGCAGGCCGCC TATCTGGCGCTCGCG Swit_1305 1460994 - 1462520 + | polysaccharide biosynthesis protein Swit_1306 1463081 - 1462515 - | hypothetical protein Swit_1307 1463149 - 1464480 + | hypothetical protein Swit_1308 1464498 - 1465130 + | diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase-like protein Swit_1309 1466044 - 1465304 - | nucleotidyl transferase TERM 693 1466124 - 1466099 - R 100 -17.7 -3.55203 | opp_overlap 1466104, overlap 1466104 AAAAGCCGGCCCAAA GAAAAGGGGGC CGAA GCCCCCTTTTC CCGAACCGTTCCCGA TERM 694 1466104 - 1466119 + r 83 -11.8 -4.08064 | opp_overlap 1466104 1466099 CCGGCCCAAAGAAAA GGGGGC CGAA GCCCCC TTTTCCCGAACCGTT TERM 695 1466119 - 1466104 - R 100 -11.8 -4.86731 | opp_overlap 1466104, overlap 1466099 CCGGCCCAAAGAAAA GGGGGC CGAA GCCCCC TTTTCCCGAACCGTT sdhA 1467936 - 1466149 - | succinate dehydrogenase flavoprotein subunit Swit_1311 1468325 - 1467936 - | succinate dehydrogenase subunit D TERM 696 1468002 - 1467978 - G 70 -12.1 -3.37796 | opp_overlap 1467980 CTTGAGGATCGAGAA GATCGCCAGCG CGG CGCCTGCGATC GTGTAGAGGTTGAGC Swit_1312 1468732 - 1468325 - | succinate dehydrogenase subunit C Swit_1313 1468900 - 1470159 + | methyl-accepting chemotaxis sensory transducer TERM 697 1470348 - 1470316 - f 70 -10.4 -3.56568 | opp_overlap 1470307, overlap 1470307 GAATGACGCTTGAAA GGCGCTTCTCCCCG CACCT CGGGGCGATCCGCC GTTGCCGTTCCGGCC Swit_1314 1470350 - 1471096 + | short-chain dehydrogenase/reductase SDR Swit_1315 1471086 - 1472063 + | 50S ribosomal protein L11P methyltransferase Swit_1316 1472210 - 1475224 + | diguanylate cyclase Swit_1317 1475678 - 1475232 - | hypothetical protein Swit_1318 1475807 - 1476049 + | prevent-host-death family protein Swit_1319 1476046 - 1476474 + | PilT domain-containing protein Swit_1320 1476873 - 1476505 - | DGPFAETKE family protein TERM 698 1476985 - 1477007 + r 87 -19.2 -2.77899 | opp_overlap 1476981 1476979, overlap 1476982 TTCCGAAGAGATCGG GCGGACAGCC CCC GGCTGTCCGC TAATTCCTCCCCGCG TERM 699 1477075 - 1477045 - R 76 -11 -3.73224 | opp_overlap 1477046 1477049, overlap 1477046 GCAGCGCCGAGCAAA TCGGGCGGACAGCC CCC GGCTGTCCGCTAGT TCCTCCCCGCGGCGC TERM 700 1477074 - 1477046 - R 77 -14.5 -2.8372 | opp_overlap 1477046 1477049, overlap 1477045 CAGCGCCGAGCAAAT CGGGCGGACAGCC CCC GGCTGTCCGCTAG TTCCTCCCCGCGGCG TERM 701 1477046 - 1477074 + r 86 -16.7 -3.14132 | opp_overlap 1477046 1477045, overlap 1477049 CAGCGCCGAGCAAAT CGGGCGGACAGCC CCC GGCTGTCCGCTAG TTCCTCCCCGCGGCG TERM 702 1477049 - 1477071 + r 87 -19.2 -2.77899 | opp_overlap 1477046 1477045, overlap 1477046 CGCCGAGCAAATCGG GCGGACAGCC CCC GGCTGTCCGC TAGTTCCTCCCCGCG TERM 703 1477139 - 1477109 - R 76 -11 -3.72576 | opp_overlap 1477105 1477104 1477113, overlap 1477110 GCGGCGCCGAGTAAA TCGGGCGGACAGCC CCC GGCTGTCCGCTAGT TCCGATTTACTCCCA TERM 704 1477138 - 1477110 - R 77 -14.5 -2.83403 | opp_overlap 1477105 1477104 1477113, overlap 1477109 CGGCGCCGAGTAAAT CGGGCGGACAGCC CCC GGCTGTCCGCTAG TTCCGATTTACTCCC TERM 705 1477113 - 1477135 + r 87 -19.2 -2.77547 | opp_overlap 1477110 1477109, overlap 1477105 1477104 CGCCGAGTAAATCGG GCGGACAGCC CCC GGCTGTCCGC TAGTTCCGATTTACT guaA 1478738 - 1477146 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 706 1478793 - 1478820 + r 93 -14 -4.1585 | opp_overlap 1478780 1478778 1478794, overlap 1478794 GAGCGGGCATGAAAA AGCCCGCCCCCG CGGA CGGGAGCGGGCC TTTTCGCGATTATCG TERM 707 1478794 - 1478819 + r 88 -17.5 -3.09028 | opp_overlap 1478780 1478778 1478794, overlap 1478793 AGCGGGCATGAAAAA GCCCGCCCCCG CGGA CGGGAGCGGGC CTTTTCGCGATTATC TERM 708 1478819 - 1478794 - R 100 -19.7 -4.7254 | opp_overlap 1478793 1478794, overlap 1478780 1478778 AGCGGGCATGAAAAA GCCCGCCCCCG CGGA CGGGAGCGGGC CTTTTCGCGATTATC Swit_1322 1479326 - 1478847 - | hypothetical protein TERM 709 1479400 - 1479422 + r 75 -13.5 -3.05384 | overlap 1479403 AGATTGCGGTGAGCT GAATGGCGG GGAGG CCGCCATTC TTCACTGCGCCGGCG Swit_1323 1481343 - 1479424 - | Pyrrolo-quinoline quinone Swit_1324 1483609 - 1481477 - | prolyl oligopeptidase TERM 710 1481617 - 1481637 + g 70 -12.5 -3.25472 | overlap 1481616 1481614 GCCTGGCGCCGATGT CCGCCGCCT GCA ACGCGGCGG TATATTTGAAGCTGT TERM 711 1483642 - 1483672 + r 91 -16.8 -3.6215 | opp_overlap 1483644, overlap 1483644 CGGAATGCAAAGAAA AAGAGCCGCGAGCG TAA CGCCCGCGGCTCTC TTTGCAATGACTTGC TERM 712 1483670 - 1483644 - R 100 -21.6 -5.33026 | opp_overlap 1483642 1483644 GAATGCAAAGAAAAA GAGCCGCGAGCG TAA CGCCCGCGGCTC TCTTTGCAATGACTT TERM 713 1483644 - 1483670 + r 93 -19.4 -3.3879 | opp_overlap 1483644, overlap 1483642 GAATGCAAAGAAAAA GAGCCGCGAGCG TAA CGCCCGCGGCTC TCTTTGCAATGACTT rplQ 1484147 - 1483725 - | 50S ribosomal protein L17 Swit_1326 1485385 - 1484324 - | DNA-directed RNA polymerase subunit alpha Swit_1327 1485857 - 1485468 - | 30S ribosomal protein S11 TERM 714 1485917 - 1485879 - R 74 -13.1 -3.27022 | gap 1, opp_overlap 1485879 1485880 CGTATCCTACATCAA GGAGCGAGCGTCGCGGCC GATC GGCC-CGACGCTCAAGCC CATTACTTCTTCTTG rpsM 1486288 - 1485920 - | 30S ribosomal protein S13 TERM 715 1486462 - 1486499 + H 71 -13.3 -3.06831 | opp_overlap 1486440 GATCGCGCCTGTCAA CCGGCCGGCGCGATTCG CGGC CGGATCGCGACGACCCG TTCCGTCCGCATTGC Swit_1329 1486576 - 1487706 + | acyltransferase 3 TERM 716 1487684 - 1487719 + T 95 -16.1 -3.86346 | opp_overlap 1487685, overlap 1487685 ACCGGCCCGAAAGAA AGGAGGCGCCCGCTC TTCCCT GAGCGGACGCCTCCC TTTCTCAACCGATGA TERM 717 1487685 - 1487718 + T 93 -19.6 -2.91593 | opp_overlap 1487685, overlap 1487684 CCGGCCCGAAAGAAA GGAGGCGCCCGCTC TTCCCT GAGCGGACGCCTCC CTTTCTCAACCGATG TERM 718 1487718 - 1487685 - T 100 -21.8 -4.41348 | opp_overlap 1487685 1487684 CCGGCCCGAAAGAAA GGAGGCGCCCGCTC TTCCCT GAGCGGACGCCTCC CTTTCTCAACCGATG Swit_1330 1489107 - 1487746 - | glutamate dehydrogenase TERM 719 1489536 - 1489498 - g 100 -21.1 -4.12942 | gap 1, opp_overlap 1489497 1489493, overlap 1489489 1489488 1489501 CCAAAGCGCTTAAAA CAAGCGGCCCGCCACGGC ATCG GCCGTGACGGG-CGCTCG CTCAGTTGTCGAGGA TERM 720 1489533 - 1489501 - g 100 -19.2 -4.18164 | gap 1, opp_overlap 1489497 1489493, overlap 1489489 1489488 1489498 AAGCGCTTAAAACAA GCGGCCCGCCACGGC ATCG GCCGTGACGGG-CGC TCGCTCAGTTGTCGA Swit_1331 1489147 - 1489554 + | hypothetical protein Swit_1332 1490185 - 1489538 - | adenylate kinase secY 1491584 - 1490217 - | preprotein translocase subunit SecY TERM 721 1491607 - 1491645 + r 74 -13.9 -2.91086 | gap 1, opp_overlap 1491612, overlap 1491603 1491612 TGTGACCCCGGAAAT GGAAACGGCGGCA-ACCC TGAT GGGTCTGCCGCCGTCTCA TATAATGTGTGCTTT TERM 722 1491640 - 1491612 - R 95 -16.8 -3.84451 | gap 1, opp_overlap 1491612 1491607 1491603 CCCCGGAAATGGAAA CGGCGGCA-ACCC TGAT GGGTCTGCCGCCG TCTCATATAATGTGT TERM 723 1491612 - 1491640 + r 83 -16.8 -2.88708 | gap 1, opp_overlap 1491612, overlap 1491607 1491603 CCCCGGAAATGGAAA CGGCGGCA-ACCC TGAT GGGTCTGCCGCCG TCTCATATAATGTGT rplO 1492227 - 1491706 - | 50S ribosomal protein L15 TERM 724 1492270 - 1492286 + r 73 -10.8 -3.57797 | opp_overlap 1492266 1492270 CGCTGAATAGAGGAA GGGGGC CATTA GCCCCC TTCTATCCGTTTGAC rpmD 1492570 - 1492385 - | 50S ribosomal protein L30 rpsE 1493296 - 1492577 - | 30S ribosomal protein S5 TERM 725 1493133 - 1493189 + g 76 -13.5 -3.53012 | TCCTCGGAGCCACGA CGGTCGTCGCGACGGCCCCGGCCGT CACGGCC ACGGCCACGGTCGCCGCCGCGGTCG TTTCCGCCACGGCCA rplR 1493653 - 1493297 - | 50S ribosomal protein L18 rplF 1494186 - 1493653 - | 50S ribosomal protein L6 rpsH 1494581 - 1494186 - | 30S ribosomal protein S8 rpsN 1494899 - 1494594 - | 30S ribosomal protein S14 TERM 726 1494922 - 1494943 + r 71 -11.5 -3.45737 | opp_overlap 1494927, overlap 1494934 GTTCTTCCTTATCCA GCAGACCGC TTAC GCGGCCTGC TTCTGGTCCTCGTTA rplE 1495512 - 1494931 - | 50S ribosomal protein L5 rplX 1495822 - 1495505 - | 50S ribosomal protein L24 Swit_1343 1496193 - 1495822 - | 50S ribosomal protein MRPL14P Swit_1344 1496474 - 1496214 - | SSU ribosomal protein S17P TERM 727 1496490 - 1496524 + r 70 -12 -3.19602 | overlap 1496488 GGCTGGCGCTCCTTA CTTCGCGGCCGCAGCG GCA CGCTGCGTCTGCAGGG TCTTGATCTGCGCGA Swit_1345 1496690 - 1496487 - | 50S ribosomal protein L29 rplP 1497123 - 1496692 - | 50S ribosomal protein L16 rpsC 1497882 - 1497187 - | 30S ribosomal protein S3 rplV 1498267 - 1497884 - | 50S ribosomal protein L22 Swit_1349 1498539 - 1498267 - | SSU ribosomal protein S19P rplB 1499379 - 1498543 - | 50S ribosomal protein L2 rplW 1499695 - 1499381 - | 50S ribosomal protein L23 TERM 728 1499449 - 1499484 + g 74 -15.4 -3.09492 | overlap 1499453 1499482 TCGCCTTCTTCACGT CGGAGCGCTTGTAGGG CGTG CCCTTCCAGCGCTTCG TCTTGCCCTTGGAGA rplD 1500314 - 1499688 - | 50S ribosomal protein L4 rplC 1501271 - 1500318 - | 50S ribosomal protein L3 TERM 729 1501149 - 1501130 - G 100 -10 -5.26875 | GTGCCAACGAAAAAA GCTCCGGT ATGA ACCGAAGC CTCCAGCCCAATTTT TERM 730 1501333 - 1501297 - R 100 -12.1 -4.91712 | opp_overlap 1501332, overlap 1501298 1501300 1501301 CCGAAGGGAGAAAAA TGACGAGCGCGGGAGCG ATT CGCCCCCGCGCTGAGCC GGCCTCTTAGGCCAG TERM 731 1501332 - 1501298 - R 86 -15.6 -3.54304 | overlap 1501297 1501300 1501301 CGAAGGGAGAAAAAT GACGAGCGCGGGAGCG ATT CGCCCCCGCGCTGAGC CGGCCTCTTAGGCCA TERM 732 1501329 - 1501300 - R 93 -17.9 -3.33589 | gap 1, overlap 1501298 1501297 1501301 AAGGGAGAAAAATGA CGAGCGCGGGAGCG ATT CGCCCCCGCGCT-G AGCCGGCCTCTTAGG TERM 733 1501329 - 1501301 - R 86 -18.1 -2.59069 | overlap 1501300 1501298 1501297 AGGGAGAAAAATGAC GAGCGCGGGAGCG ATT CGCCCCCGCGCTG AGCCGGCCTCTTAGG Swit_1354 1501651 - 1501340 - | 30S ribosomal protein S10 TERM 734 1501753 - 1501716 - R 100 -20.5 -4.41548 | opp_overlap 1501717 1501748, overlap 1501717 1501721 CTATATTCTACAAAA GCGAACCGGCCGACCCC CGAA GGGGCCGGCCGGCCCGT TTGAACGCGCTATAT TERM 735 1501752 - 1501717 - R 100 -24 -3.24447 | opp_overlap 1501717 1501748, overlap 1501716 1501721 TATATTCTACAAAAG CGAACCGGCCGACCCC CGAA GGGGCCGGCCGGCCCG TTTGAACGCGCTATA TERM 736 1501717 - 1501752 + r 100 -17.4 -3.54129 | opp_overlap 1501717 1501716 1501721, overlap 1501748 TATATTCTACAAAAG CGAACCGGCCGACCCC CGAA GGGGCCGGCCGGCCCG TTTGAACGCGCTATA TERM 737 1501748 - 1501721 - R 100 -22 -3.41587 | opp_overlap 1501717, overlap 1501717 1501716 TTCTACAAAAGCGAA CCGGCCGACCCC CGAA GGGGCCGGCCGG CCCGTTTGAACGCGC Swit_1355 1502958 - 1501768 - | elongation factor Tu Swit_1356 1505107 - 1503035 - | elongation factor G TERM 738 1504282 - 1504313 + g 71 -10.8 -3.61398 | opp_overlap 1504277, overlap 1504285 1504286 TCGGCAGATAGTCGA CGACGGCGTCGAGC AGCG GCTGGACGCCCTTG TTCTTGAACGACGAG TERM 739 1504285 - 1504310 + g 70 -8.9 -3.9461 | opp_overlap 1504277, overlap 1504282 1504286 GCAGATAGTCGACGA CGGCGTCGAGC AGCG GCTGGACGCCC TTGTTCTTGAACGAC Swit_1357 1505694 - 1505224 - | 30S ribosomal protein S7 TERM 740 1505524 - 1505540 + g 74 -11.5 -3.74224 | opp_overlap 1505514 GAAGACGCCCAGCGG CTCGCGC TTG GCGCGGG TTTCGATGGTTTCGA rpsL 1506079 - 1505708 - | 30S ribosomal protein S12 TERM 741 1505963 - 1505999 + g 73 -7.2 -4.21812 | gap 1, opp_overlap 1505983, overlap 1505972 CTTCTTCGGGGTCGT CGTGTAGACGCGCGTGC AAAC GC-CGCGCTTCTGCGGG TTCTTTTCCATCGCA TERM 742 1506194 - 1506164 - R 76 -13.9 -3.25088 | opp_overlap 1506164, overlap 1506156 GCGGAAATGCACGAA GGCCCCGGCGGTC TTTGC GACCTCCCGGGCC ATCACACGCATCGGC Swit_1359 1506640 - 1506329 - | CutA1 divalent ion tolerance protein Swit_1360 1507563 - 1506637 - | cation diffusion facilitator family transporter Swit_1361 1507720 - 1508976 + | hypothetical protein Swit_1362 1509129 - 1509767 + | hypothetical protein Swit_1363 1509870 - 1510850 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 743 1510919 - 1510940 + T 100 -13 -4.72272 | TCGGGCGGGTAGCAT GGACGGGC CATCGC GCCCGTCC TTTTTCGTGAAGCCG Swit_1364 1511255 - 1510956 - | hypothetical protein Swit_1365 1512706 - 1511309 - | dihydrolipoamide dehydrogenase Swit_1366 1513114 - 1512722 - | thioesterase superfamily protein Swit_1367 1514442 - 1513111 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase Swit_1368 1514578 - 1515033 + | UspA domain-containing protein Swit_1369 1515428 - 1515057 - | hypothetical protein Swit_1371 1516315 - 1515818 - | GAF domain-containing protein Swit_1372 1516386 - 1516862 + | hypothetical protein TERM 744 1517292 - 1517258 - g 90 -17.9 -3.53012 | TCCCGGGCGGCGAAA GCCAAGCGCATGGAC GGCAA GTCCAAGCGCTCGGC GGTCAAGAACCTGCG Swit_1373 1516904 - 1517326 + | hypothetical protein Swit_1374 1518153 - 1517323 - | short-chain dehydrogenase/reductase SDR Swit_1375 1518253 - 1519170 + | AraC family transcriptional regulator Swit_1376 1519926 - 1519174 - | pseudouridine synthase Swit_1377 1519979 - 1520602 + | 50S ribosomal protein L25/general stress protein Ctc TERM 745 1520661 - 1520627 - f 91 -15.7 -3.90922 | opp_overlap 1520631, overlap 1520631 AGCTTCGCGAAAGAA TGAAGGCCCCGCCGA CCCGT TCGGCGGGGCCTTTT TCTTGCTGCGGGGAT TERM 746 1520631 - 1520657 + F 100 -20.9 -5.1356 | opp_overlap 1520627 1520631 TCGCGAAAGAATGAA GGCCCCGCCGA CCCGT TCGGCGGGGCC TTTTTCTTGCTGCGG TERM 747 1520657 - 1520631 - f 100 -20.9 -3.61652 | opp_overlap 1520631, overlap 1520627 TCGCGAAAGAATGAA GGCCCCGCCGA CCCGT TCGGCGGGGCC TTTTTCTTGCTGCGG Swit_1378 1520763 - 1521332 + | peptidyl-tRNA hydrolase Swit_1379 1521344 - 1521733 + | 3-demethylubiquinone-9 3-methyltransferase Swit_1380 1521847 - 1524660 + | tetratricopeptide TPR_4 TERM 748 1524708 - 1524669 - T 100 -15.1 -4.77165 | overlap 1524675 GCGCTGAGAATAAAA GAAAAACGGCGCCAGGT TACCAG ACCTGACGCCGTCTCCC GCGGGTGCCGGGCGG TERM 749 1524702 - 1524675 - T 100 -14.9 -5.64321 | overlap 1524669 AGAATAAAAGAAAAA CGGCGCCAGGT TACCAG ACCTGACGCCG TCTCCCGCGGGTGCC Swit_1381 1527108 - 1524748 - | hypothetical protein Swit_1382 1528439 - 1527111 - | hypothetical protein TERM 750 1527467 - 1527411 - G 82 -15.8 -3.30635 | gap 1, opp_overlap 1527428 GAAACCGTTGGAGAA CTGGTCGCCCGCGTTGCGGCGCGCC TCCTCCTT GCCGC-CCGACACGCTGGCGACCAG GACGCGGTCGGCATA Swit_1383 1528555 - 1529850 + | peptidase C14, caspase catalytic subunit p20 Swit_1384 1530249 - 1529860 - | hypothetical protein Swit_1385 1530886 - 1530257 - | hypothetical protein Swit_1386 1530998 - 1531789 + | two component transcriptional regulator TERM 751 1532785 - 1532823 + G 80 -15.9 -3.21099 | opp_overlap 1532769 CAGGTGCGGATCACC CGCGCGGTCGCCGCCGG CCCGT TCGTCGGCGATCGCGAG TTGGTGATCCGGGCG Swit_1387 1531786 - 1533150 + | integral membrane sensor signal transduction histidine kinase Swit_1388 1533261 - 1533905 + | hypothetical protein TERM 752 1533925 - 1533962 + F 100 -19.9 -4.58395 | opp_overlap 1533932, overlap 1533927 1533927 CCCGGATCGGATGTC GACGAAAGGCCCCGGAG GATG CTCCGGGGCCTTTCCGC TTTTTGCGGCATGCA TERM 753 1533927 - 1533960 + F 91 -21.1 -2.60508 | opp_overlap 1533932, overlap 1533925 1533927 CGGATCGGATGTCGA CGAAAGGCCCCGGAG GATG CTCCGGGGCCTTTCC GCTTTTTGCGGCATG TERM 754 1533927 - 1533961 + F 95 -20.9 -3.34716 | gap 1, opp_overlap 1533932, overlap 1533927 1533925 CGGATCGGATGTCGA C-GAAAGGCCCCGGAG GATG CTCCGGGGCCTTTCCG CTTTTTGCGGCATGC TERM 755 1533955 - 1533932 - f 100 -19.6 -3.73775 | opp_overlap 1533927 1533927 1533925 CGGATGTCGACGAAA GGCCCCGGAG GATG CTCCGGGGCC TTTCCGCTTTTTGCG Swit_1389 1534037 - 1535137 + | translation-associated GTPase TERM 756 1535184 - 1535152 - f 80 -14.2 -3.22114 | gap 1, overlap 1535144 1535146 1535150 GACATTAGACGAAGA TC-CGTCATGCCGGC CTCC GCCGGCTTGACGCGA AAGCAGGAATGACCG Swit_1390 1535201 - 1535653 + | dehydratase Swit_1391 1535723 - 1536214 + | hypothetical protein Swit_1392 1536761 - 1536261 - | hypothetical protein Swit_1393 1537621 - 1536758 - | methylthioadenosine phosphorylase TERM 757 1537648 - 1537675 + r 93 -14 -4.21194 | opp_overlap 1537649, overlap 1537649 TCCCCTCATAGGAAA AGGGCCGCCCGG TCGC CCGGACGGCCCC TTTTCGCTCATCGAA TERM 758 1537674 - 1537649 - R 100 -19.7 -4.34402 | opp_overlap 1537648 1537649 CCCCTCATAGGAAAA GGGCCGCCCGG TCGC CCGGACGGCCC CTTTTCGCTCATCGA TERM 759 1537649 - 1537674 + r 89 -17.5 -3.12395 | opp_overlap 1537649, overlap 1537648 CCCCTCATAGGAAAA GGGCCGCCCGG TCGC CCGGACGGCCC CTTTTCGCTCATCGA Swit_1394 1538543 - 1537701 - | cytochrome c1 Swit_1395 1539825 - 1538560 - | cytochrome b/b6 domain-containing protein Swit_1396 1540403 - 1539837 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit Swit_1397 1540597 - 1541046 + | tRNA/rRNA methyltransferase (SpoU) Swit_1398 1541043 - 1541903 + | coproporphyrinogen III oxidase TERM 760 1542232 - 1542249 + G 72 -4.1 -4.60487 | overlap 1542216 1542224 GATTTCCGCCAGCCC GGCGA GGCCGAGA TCGCC TTTTTCGGCCTCATC Swit_1399 1541923 - 1542528 + | GCN5-related N-acetyltransferase Swit_1400 1543298 - 1542504 - | hypothetical protein Swit_1401 1543403 - 1544074 + | lipoate-protein ligase B Swit_1402 1544436 - 1545122 + | hypothetical protein TERM 761 1545141 - 1545164 + T 80 -16.8 -2.62396 | opp_overlap 1545138 CATCGGACGGAACCG TCATCCCGGC GAAA GCCGGGATGA TCATGTCAGCGAATC Swit_1403 1545802 - 1545170 - | organic radical activating-like protein Swit_1404 1546494 - 1545802 - | exsB protein Swit_1405 1546621 - 1547403 + | 20S proteasome, A and B subunits TERM 762 1547431 - 1547408 - T 91 -5.8 -5.37345 | overlap 1547410 CGGAACGATAAAAAA GAGGGCCGCC CGAG AGCGGCCCAG TGAGGCTATGCAGCC TERM 763 1547429 - 1547410 - T 95 -12.8 -4.31563 | overlap 1547408 GAACGATAAAAAAGA GGGCCGCC CGAG AGCGGCCC AGTGAGGCTATGCAG Swit_1406 1548033 - 1547584 - | hypothetical protein Swit_1407 1549103 - 1548204 - | Hsp33 protein TERM 764 1548241 - 1548231 - G 75 -8.2 -4.18494 | overlap 1548218 GAGCGCCAGGGAAAA GCGC CTG GCGC AGAATTCGCAATCGA Swit_1408 1550130 - 1549201 - | ornithine carbamoyltransferase Swit_1409 1551317 - 1550127 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 765 1551389 - 1551371 - H 100 -13.1 -4.81249 | TCCGAAACGCAAAAA GGCGGCC CTCCC GGCCGCC TGTCGGAGAGCGCAT Swit_1410 1551411 - 1551917 + | GCN5-related N-acetyltransferase Swit_1411 1552362 - 1551925 - | hypothetical protein Swit_1412 1552508 - 1552966 + | glutathione-dependent formaldehyde-activating, GFA Swit_1413 1553049 - 1554449 + | threonine synthase Swit_1414 1554455 - 1555687 + | processing peptidase Swit_1415 1555817 - 1556683 + | SAM-dependent methyltransferase-like protein Swit_1416 1556746 - 1557654 + | hypothetical protein Swit_1417 1557933 - 1557682 - | hypothetical protein Swit_1418 1558909 - 1558517 - | hypothetical protein TERM 766 1558680 - 1558691 + g 86 -5.8 -4.81551 | opp_overlap 1558679 1558680 TGGGGGAAATTAAAG GCTC GGAT GAGC TTTTTCGTCTCGGTG Swit_1419 1559421 - 1559128 - | pterin-4-alpha-carbinolamine dehydratase Swit_1420 1559471 - 1559872 + | hypothetical protein Swit_1421 1559872 - 1560456 + | heme exporter protein CcmA Swit_1422 1560453 - 1561100 + | cytochrome c-type biogenesis protein CcmB Swit_1423 1563319 - 1561226 - | oligopeptidase B Swit_1424 1563931 - 1563359 - | hypothetical protein Swit_1425 1565618 - 1564341 - | amino acid aldolase or racemase-like protein Swit_1426 1566419 - 1565655 - | short-chain dehydrogenase/reductase SDR Swit_1427 1567717 - 1566464 - | major facilitator transporter TERM 767 1566621 - 1566601 - G 79 -15.4 -3.30243 | overlap 1566587 AGGCACGCCCCAGAA GCGCGGGC CCGCC GCCCGCGC CGATCGCGAACAGGC Swit_1428 1569242 - 1567710 - | hypothetical protein Swit_1429 1570390 - 1569239 - | FAD dependent oxidoreductase Swit_1430 1571258 - 1570479 - | XRE family transcriptional regulator Swit_1431 1571470 - 1571970 + | hypothetical protein Swit_1432 1572135 - 1574648 + | regulatory protein, LuxR TERM 768 1574815 - 1574767 - f 70 -7.4 -4.05788 | gap 2, opp_overlap 1574768 1574804, overlap 1574768 TTGGTGGAAAGGAAA TTCCCGGACAC-CGTCTCCGA-GG GCC CCGCCGAAGACGCGGTTCCGGGAT CCGTTCGATATGCTG Swit_1433 1574825 - 1576408 + | gamma-glutamyltransferase TERM 769 1577934 - 1577959 + G 78 -13.3 -3.54424 | GGTGAAGGCGTCGTC CCGACCGTCGA GCGA TCGACGGTCCG TTTCGCCGAGTCCGG Swit_1434 1576446 - 1578206 + | nitric oxide dioxygenase Swit_1435 1578894 - 1578286 - | SNARE associated Golgi protein TERM 770 1579809 - 1579795 - g 70 -4.2 -4.41348 | GTGCCCGGAAAGAAA GGCG TGGCGAG CGCC GACCGCGGCGGCATG Swit_1436 1579132 - 1581381 + | TonB-dependent receptor TERM 771 1581385 - 1581415 + F 100 -18.3 -4.56775 | overlap 1581386 CGTTCCTTCTGACCT CGGAGGGAGGCGG CATCA CCGCCTCCCTCCA TTTTTCACACGGGCT TERM 772 1581386 - 1581414 + F 100 -21.8 -3.33744 | overlap 1581385 GTTCCTTCTGACCTC GGAGGGAGGCGG CATCA CCGCCTCCCTCC ATTTTTCACACGGGC TERM 773 1581523 - 1581502 - gf 72 -3.7 -4.57073 | gap 1 TATCTCGCCGAAAAA GGACTGGC GATCGAA GCC-GTCC ATCTCGATCTCTCCT Swit_1437 1581436 - 1582044 + | glutathione S-transferase domain-containing protein Swit_1438 1582007 - 1583248 + | monooxygenase, FAD-binding Swit_1439 1583252 - 1584103 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein Swit_1440 1585818 - 1584226 - | glucose sorbosone dehydrogenase Swit_1441 1587941 - 1585815 - | Pyrrolo-quinoline quinone TERM 774 1587385 - 1587344 - G 74 -15.2 -3.02144 | gap 2 TGATCTGCGTCAACA GGCTTGCGCCGGCGCCGTCA TAGC TG-CGGCGCCAGTGCA-GCC AGTCGCCGGGCGCGG Swit_1442 1589002 - 1587938 - | alcohol dehydrogenase Swit_1443 1591637 - 1589046 - | TonB-dependent receptor Swit_1444 1591995 - 1593311 + | luciferase family protein Swit_1445 1593308 - 1594096 + | alpha/beta hydrolase fold Swit_1446 1595004 - 1594150 - | response regulator receiver protein Swit_1447 1595169 - 1596095 + | alpha/beta hydrolase domain-containing protein TERM 775 1597818 - 1597784 - gT 77 -15.7 -2.66435 | gap 1, overlap 1597781 AGCCCGATCACATCA CGCCGGCGCGCGATCC CGCA GG-TCGCGCACCCGCG CCGCCTTGCCCGACG Swit_1449 1599070 - 1597781 - | phenylacetate-CoA ligase Swit_1448 1596088 - 1597878 + | AMP-dependent synthetase and ligase TERM 776 1598035 - 1598016 - GT 70 -10 -3.57263 | gap 1 ATCTCGACCTCGAAA TGCG-GGGC GAG GCCCTCGCA CTTGAGCACCTGCTC Swit_1450 1600325 - 1599309 - | cation diffusion facilitator family transporter Swit_1451 1600609 - 1600334 - | hypothetical protein TERM 777 1600957 - 1600975 + H 76 -5.8 -4.58395 | overlap 1600958 GGCGCGCGCCACTTC GGGGTCCC ATC GGGCCCGC TTTTTCCGGGATACC Swit_1452 1600998 - 1601336 + | protein translocase subunit yajC secD 1601344 - 1602939 + | preprotein translocase subunit SecD TERM 778 1603399 - 1603419 + G 74 -13.3 -3.28447 | overlap 1603397 TGCTCGCGGTCATCC TCGCGGTGC TCG GCATCGCGA TCTTCTCCTGGCTGC TERM 779 1603911 - 1603882 - g 77 -11.4 -3.93369 | gap 1, overlap 1603883 CCAAGCCCAAGGAAA GCCGGCCCGACGC CGAGC GCGTCGGCCCG-C AGCCCTGATGGTCAG Swit_1454 1602954 - 1603919 + | protein translocase subunit secF Swit_1455 1603919 - 1604296 + | hypothetical protein Swit_1456 1605661 - 1604432 - | glycosyl transferase, group 1 TERM 780 1605810 - 1605788 - g 79 -11.3 -4.00445 | overlap 1605803 1605804 CACCAGCAAGAACAA GGGCGACAC CAAAT ATGTCGCCC GCGACGTGGACACGC Swit_1457 1605699 - 1606484 + | DNA uptake lipoprotein-like protein Swit_1458 1606706 - 1607701 + | flagellar motor switch protein FliM Swit_1459 1607698 - 1608021 + | flagellar motor switch protein FliN Swit_1460 1608018 - 1608305 + | hypothetical protein Swit_1461 1610392 - 1608473 - | 1-deoxy-D-xylulose-5-phosphate synthase Swit_1462 1610916 - 1610440 - | transcriptional regulator Swit_1463 1611332 - 1610955 - | hypothetical protein Swit_1464 1612081 - 1611413 - | two component transcriptional regulator Swit_1465 1614765 - 1612078 - | osmosensitive K+ channel signal transduction histidine kinase TERM 781 1612798 - 1612765 - G 70 -12.3 -3.29947 | overlap 1612766 GACCGAGGAGAGCAA GGCGGCGCGGAGCCG GTCG CGGCTGCGCACCACG TCGAGCTCGCGCATC TERM 782 1612797 - 1612766 - G 73 -15.8 -2.57647 | overlap 1612765 ACCGAGGAGAGCAAG GCGGCGCGGAGCCG GTCG CGGCTGCGCACCAC GTCGAGCTCGCGCAT Swit_1466 1615352 - 1614762 - | potassium-transporting ATPase, C subunit Swit_1467 1617529 - 1615499 - | K+-transporting ATPase, B subunit Swit_1468 1619250 - 1617547 - | potassium-transporting ATPase, A subunit TERM 783 1619568 - 1619549 - R 86 -12.8 -4.05902 | GAAAGCATAAGGAAA GGCGCCGA AGGC CCGGCGCC CGCCCCGTCAGGCGG Swit_1469 1621291 - 1619576 - | acyl-CoA dehydrogenase domain-containing protein Swit_1470 1621932 - 1621393 - | molybdenum cofactor guanylyltransferase Swit_1471 1622714 - 1621929 - | formate dehydrogenase family accessory protein FdhD Swit_1472 1622967 - 1622716 - | formate dehydrogenase delta subunit Swit_1473 1625807 - 1622964 - | formate dehydrogenase, alpha subunit TERM 784 1623314 - 1623342 + g 73 -12.3 -3.4252 | GATGCCAGGCGACAT TGGCGGTGCGCCG CGT CTGCGCGCCGACA TTGTAATGGCTGAGG Swit_1474 1627362 - 1625812 - | NADH dehydrogenase (quinone) Swit_1475 1627838 - 1627359 - | NADH dehydrogenase (ubiquinone), 24 kDa subunit Swit_1476 1628810 - 1627908 - | LysR family transcriptional regulator TERM 785 1629044 - 1629090 + G 87 -17.9 -3.30441 | gap 2, opp_overlap 1628988, overlap 1629046 1629046 1629066 AGCCGATCGCCGGCC CCG-GCGCGGGGGCCC-GCGCCG CGC CGCCGCCGGGCGCCCGCGCGCTG TTCTGGCGGCTGGTC TERM 786 1629046 - 1629088 + G 86 -19.1 -3.21924 | gap 2, overlap 1629046 1629044 1629066 CCGATCGCCGGCCCC G-GCGCGGGGGCCC-GCGCCG CGC CGCCGCCGGGCGCCCGCGCGC TGTTCTGGCGGCTGG TERM 787 1629046 - 1629087 + G 79 -19.3 -2.5294 | gap 1, overlap 1629044 1629046 1629066 CCGATCGCCGGCCCC GGCGCGGGGGCCC-GCGCCG CGC CGCCGCCGGGCGCCCGCGCG CTGTTCTGGCGGCTG TERM 788 1631244 - 1631229 - g 70 -3.2 -4.4009 | overlap 1631230 GGCGATGGGAGAAAA GCCGAT CGAC ATCGGG CTGGGCATCAGCACC Swit_1477 1629016 - 1631727 + | putative adenylate/guanylate cyclase TERM 789 1631739 - 1631725 - T 70 -10 -3.57263 | overlap 1631728 ACGCTCACCTCCAAA TAGGCG CGG CGCCTA TCCCACCTGCGCCCA Swit_1478 1632798 - 1631737 - | aminoglycoside phosphotransferase Swit_1479 1633958 - 1632795 - | acyl-CoA dehydrogenase domain-containing protein Swit_1480 1634727 - 1633972 - | short-chain dehydrogenase/reductase SDR TERM 790 1634847 - 1634868 + H 75 -13.7 -2.99471 | gap 1 TGGCCCGGACCCGAG CCCGCCGGCG CGG CGC-GGCGGG TCTATCTCGGCATCC Swit_1482 1635524 - 1636222 + | hypothetical protein Swit_1483 1636235 - 1637029 + | hypothetical protein Swit_1484 1637265 - 1639598 + | TonB-dependent receptor TERM 791 1639698 - 1639734 + G 85 -17.9 -3.14132 | GCATCTCGATCGGAC CATCGGCCCGCGCAGCG TCT CGCTGCGCGGGCGGACC TTCGTCGACCACGGG Swit_1485 1639588 - 1641060 + | hypothetical protein Swit_1486 1641067 - 1642938 + | TPR repeat-containing protein Swit_1487 1644635 - 1643028 - | stage II sporulation E family protein Swit_1488 1644871 - 1647282 + | ATP/ADP translocase-like protein Swit_1489 1647272 - 1648399 + | histidine kinase Swit_1490 1648396 - 1648761 + | CRP/FNR family transcriptional regulator Swit_1491 1648758 - 1649936 + | hypothetical protein Swit_1492 1650463 - 1650059 - | anti-sigma-factor antagonist Swit_1493 1650513 - 1650911 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Swit_1494 1650957 - 1651424 + | nuclear protein SET Swit_1495 1651414 - 1652619 + | Orn/DAP/Arg decarboxylase 2 Swit_1496 1654833 - 1652608 - | periplasmic sensor diguanylate cyclase/phosphodiesterase Swit_1497 1655861 - 1655121 - | dienelactone hydrolase TERM 792 1655539 - 1655499 - G 77 -14.8 -3.23853 | gap 2, overlap 1655497 GCCGCCGAAGCAATA GCC-GATCGAGG-CGATCCG CGC CGGATCGACCTCGTCCCGGC CGAGCAGCGCCTCGA Swit_1498 1657001 - 1656006 - | Mg2+ transporter protein, CorA family protein Swit_1499 1657266 - 1658714 + | hypothetical protein TERM 793 1658930 - 1658896 - g 83 -15.1 -3.61398 | gap 1 CCGCGCCGCCAACAA CCTGATGCTG-GACCG CTAT CGGTCGCAGCAGCAGG CGACCAAGCGCGACC Swit_1500 1658711 - 1659223 + | ECF subfamily RNA polymerase sigma-24 factor Swit_1501 1659265 - 1660212 + | anti-FecI sigma factor, FecR Swit_1502 1660209 - 1662614 + | TonB-dependent receptor, plug Swit_1503 1662817 - 1666026 + | autotransporter beta-domain-containing protein TERM 794 1666144 - 1666169 + F 100 -17.6 -4.86731 | TGCCCCTGTATCTGG TCCCCCGCCC TCCCCT GGGCGGGGGA TTTTCTTTCGCCGCG Swit_1504 1666597 - 1668558 + | ribonucleotide-diphosphate reductase subunit alpha TERM 795 1668581 - 1668619 + F 100 -21.1 -3.57144 | opp_overlap 1668569 1668574, overlap 1668582 1668584 1668587 AAACTGAACGAGGGT TCGGGACGGCCGCGTGA GACGA TCACGCGGCCGTTCTGG TTTCCACGTCCCACC TERM 796 1668582 - 1668618 + F 100 -22.4 -2.74144 | opp_overlap 1668569 1668574, overlap 1668581 1668584 1668587 AACTGAACGAGGGTT CGGGACGGCCGCGTGA GACGA TCACGCGGCCGTTCTG GTTTCCACGTCCCAC TERM 797 1668584 - 1668616 + F 100 -21.4 -2.91695 | opp_overlap 1668574, overlap 1668582 1668581 1668587 CTGAACGAGGGTTCG GGACGGCCGCGTGA GACGA TCACGCGGCCGTTC TGGTTTCCACGTCCC TERM 798 1668587 - 1668613 + F 100 -19.5 -3.60419 | opp_overlap 1668574, overlap 1668584 1668582 1668581 AACGAGGGTTCGGGA CGGCCGCGTGA GACGA TCACGCGGCCG TTCTGGTTTCCACGT Swit_1505 1668969 - 1669190 + | hypothetical protein nrdF 1669202 - 1670254 + | ribonucleotide-diphosphate reductase subunit beta TERM 799 1670281 - 1670315 + T 86 -18.1 -2.59039 | gap 1, opp_overlap 1670288, overlap 1670288 GATCCTGAGGGGATA GAAGAAAGCCCGGCTC CTTC GAGCCGGGCTTT-TTC ATTATGGCCGTCATT TERM 800 1670288 - 1670309 + T 100 -17.3 -4.93365 | opp_overlap 1670288, overlap 1670281 AGGGGATAGAAGAAA GCCCGGCTC CTTC GAGCCGGGC TTTTTCATTATGGCC TERM 801 1670309 - 1670288 - T 100 -17.3 -4.39329 | opp_overlap 1670288 1670281 AGGGGATAGAAGAAA GCCCGGCTC CTTC GAGCCGGGC TTTTTCATTATGGCC Swit_1507 1671403 - 1670426 - | 17 kDa surface antigen Swit_1508 1671542 - 1671973 + | 17 kDa surface antigen Swit_1509 1672135 - 1672569 + | 17 kDa surface antigen TERM 802 1672699 - 1672736 + F 100 -19.2 -4.25104 | gap 1, overlap 1672700 GTAACGCTTGACCCT GCCCCTC-CGTCGCGCC AATCC GGCGCGACGAGAGGGGA TTTTCATGGCAGACA TERM 803 1672700 - 1672735 + F 100 -22.7 -3.14848 | gap 1, overlap 1672699 TAACGCTTGACCCTG CCCCTC-CGTCGCGCC AATCC GGCGCGACGAGAGGGG ATTTTCATGGCAGAC Swit_1510 1672742 - 1674019 + | major facilitator transporter TERM 804 1674760 - 1674807 + G 77 -11.2 -3.8917 | gap 1, overlap 1674790 CCGCACGTCAAGCTG TGCGAGGAGCT-GTTCTCGGCCG CGA CGGCCGAGTTCAAGCATCTCGAA TTCTTCTACTTCCAC Swit_1511 1674019 - 1675194 + | hypothetical protein anmK 1676401 - 1675304 - | anhydro-N-acetylmuramic acid kinase TERM 805 1675411 - 1675464 + g 75 -6.5 -4.52873 | gap 1, opp_overlap 1675403, overlap 1675434 1675435 CCATATAGGCGAAAC CCTCCGCCTCGGTCGCGTCGC-CG TTCCAGC CGAGCGCCTCGATCGGCTCGGGGG TTATTTTTGTAGCGG Swit_1513 1676446 - 1677708 + | tyrosyl-tRNA synthetase Swit_1514 1677879 - 1679159 + | hypothetical protein TERM 806 1679548 - 1679571 + G 77 -14.6 -3.14344 | gap 1 CGGGTGGTCTGGTCG CTCGGCGGCCG GGT CGG-CGCCGAG TTCATCAAGCCGATC Swit_1515 1679290 - 1679655 + | hypothetical protein TERM 807 1679671 - 1679696 + T 83 -14.7 -3.53012 | opp_overlap 1679687, overlap 1679672 GGGTCGACGCCTAAG CCCCCCTCCCT TGAA AGGGAGGGGGA TTTAGCCCGCCCGCA TERM 808 1679672 - 1679695 + T 86 -18.2 -2.71712 | opp_overlap 1679687, overlap 1679671 GGTCGACGCCTAAGC CCCCCTCCCT TGAA AGGGAGGGGG ATTTAGCCCGCCCGC Swit_1516 1681758 - 1679698 - | DEAD/DEAH box helicase domain-containing protein TERM 809 1681775 - 1681818 + H 73 -8.9 -3.97689 | gap 1, overlap 1681810 GATTCGCCTGCTGTC GCATTTTCCGCGTCGCGGGT CGATT GCGCGCGGCTC-GAAAATGC TTATTTCCGCTTCTG Swit_1517 1681889 - 1682155 + | hypothetical protein TERM 810 1682271 - 1682239 - f 82 -14.3 -3.35371 | CATAGCGGCAATGAA TCCTGACATTCGTCA GGA TGACGAATGACAAGA CAGATATGACCGATC TERM 811 1683602 - 1683571 - g 87 -17.2 -3.32343 | GGCAGAGCGCCATAA CCCTCCCCCTCCCG CTTG CGGGAGGGGGCCGG GGGGTGGGCCTTCCC Swit_1518 1682256 - 1685843 + | transcription-repair coupling factor TERM 812 1685879 - 1685831 - T 95 -19.6 -3.14132 | gap 2, opp_overlap 1685829 1685874 1685875 GCGGGGGTTGATGAA GATCGTGGGGTGAGGAGGGCGCGC TTC GCGCGCCGACC-CACCCC-CGACC CCTCCCTTCCAGGGA Swit_1519 1688039 - 1685904 - | diguanylate cyclase/phosphodiesterase TERM 813 1687967 - 1687925 - G 72 -6.1 -4.33675 | gap 1 AGGATATCAGGAAAA GAGGCAACTGCCCCCCTGCG GCGG CGCTGGCAGCC-GCTGCCCC GATTGAGCCCACACC Swit_1520 1688114 - 1689154 + | GTP cyclohydrolase subunit MoaA TERM 814 1689804 - 1689774 - g 72 -13.3 -3.16564 | gap 1 GCTCGACGCGATCAA GCGCCCGGTCAGCG CCGT CGCCGACCAG-CGC GAGGTGCGCGACGTC ppnK 1689151 - 1689924 + | inorganic polyphosphate/ATP-NAD kinase TERM 815 1690358 - 1690335 - T 100 -13.8 -5.49234 | opp_overlap 1690334 AGACCGAACAAAAAA GGGGCAGCGC CGAA GCGCCACCCC ATGGCTTCGAGCTGC Swit_1522 1692086 - 1690380 - | resolvase domain-containing protein Swit_1523 1692520 - 1692083 - | hypothetical protein TERM 816 1692464 - 1692499 + g 95 -15.4 -3.99324 | gap 1, opp_overlap 1692445, overlap 1692464 CAGCCACTCGCCGCG C-AGCTGCGCCGGCGAC ATC GTCGCCAGCGCAGCCAG TTTGTCGTCATGCCG TERM 817 1692464 - 1692498 + g 74 -15.6 -2.99273 | opp_overlap 1692445, overlap 1692464 CAGCCACTCGCCGCG CAGCTGCGCCGGCGAC ATC GTCGCCAGCGCAGCCA GTTTGTCGTCATGCC Swit_1524 1693044 - 1692523 - | hypothetical protein TERM 818 1693190 - 1693166 - H 74 -14.3 -2.57026 | overlap 1693165 CACATGGATAGCAAT GCTCGACCCCG CAC CGAAGTCGAGC GGAAAATACACCGAA Swit_1525 1694064 - 1694600 + | hypothetical protein Swit_1526 1694600 - 1696558 + | thiamine pyrophosphate binding domain-containing protein Swit_1527 1696558 - 1696923 + | hypothetical protein Swit_1528 1697176 - 1698012 + | alpha/beta hydrolase fold Swit_1529 1698078 - 1699289 + | thiolase Swit_1530 1699273 - 1700841 + | AMP-dependent synthetase and ligase Swit_1531 1700856 - 1702157 + | Rieske (2Fe-2S) domain-containing protein Swit_1532 1702157 - 1702645 + | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_1533 1702741 - 1703733 + | helix-turn-helix domain-containing protein TERM 819 1703757 - 1703785 + T 91 -16.8 -3.60475 | gap 1, opp_overlap 1703757 AAGCGGATCTGAAAA GCGGCCCG-TTCC GCTG GGAAGCGGGCCGC TTTGCAATCGACCTT TERM 820 1703785 - 1703757 - T 100 -16.8 -4.14511 | gap 1, opp_overlap 1703757 AAGCGGATCTGAAAA GCGGCCCG-TTCC GCTG GGAAGCGGGCCGC TTTGCAATCGACCTT Swit_1534 1706120 - 1703805 - | TonB-dependent receptor Swit_1535 1707956 - 1707051 - | LysR family transcriptional regulator TERM 821 1707833 - 1707820 - G 78 -9.5 -4.17048 | TCGTCGTCAAAATAA GCGCG CAGC CGCGC CAAGGCCGCGCTCAT Swit_1536 1709211 - 1708018 - | acyl-CoA dehydrogenase type 2 TERM 822 1709299 - 1709282 - H 84 -8.5 -4.43877 | TAACCGTCAAACAAA TAGATCG GGAT CGATCTA TCGATGAAATCGATA TERM 823 1709334 - 1709321 - H 73 -6.7 -4.37534 | AAATCGATATGAAAA CCTGT GTTG ACAGG CACCTCCAATTTCAT Swit_1537 1709403 - 1710455 + | fumarylacetoacetate (FAA) hydrolase Swit_1538 1710466 - 1711407 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 824 1711433 - 1711484 + F 95 -18.1 -3.53224 | gap 2, overlap 1711436 1711437 TTCCGCCTGATCATC GCTCCGACGGCCCGGTCCCGCATGG CACG CCCTGCG-GATCGGGCCGTCG-ATC TTTCCGGCCCCGATC TERM 825 1711436 - 1711482 + F 95 -20.9 -3.34398 | gap 1, overlap 1711433 1711437 CGCCTGATCATCGCT CCGACGGCCCGGTCCCGCATGG CACG CCCTGCG-GATCGGGCCGTCGA TCTTTCCGGCCCCGA TERM 826 1711437 - 1711481 + F 100 -24.4 -2.60496 | gap 1, overlap 1711436 1711433 GCCTGATCATCGCTC CGACGGCCCGGTCCCGCATGG CACG CCCTGCG-GATCGGGCCGTCG ATCTTTCCGGCCCCG Swit_1539 1711586 - 1713793 + | TonB-dependent receptor Swit_1540 1713884 - 1714843 + | AraC family transcriptional regulator Swit_1541 1714821 - 1716092 + | vanillate monooxygenase Swit_1542 1716266 - 1717366 + | Rieske (2Fe-2S) domain-containing protein TERM 827 1717451 - 1717407 - T 100 -25.1 -4.56775 | opp_overlap 1717408 1717409, overlap 1717409 ACGCTGCCCGAAAAA CACCAGAGCGGCCGGTCTGAC AGC ATCAGACCGGCCGCTCTGGAT TTTTGTCTATGTGAT TERM 828 1717408 - 1717450 + T 100 -27.9 -5.07275 | opp_overlap 1717407 1717409, overlap 1717409 CGCTGCCCGAAAAAC ACCAGAGCGGCCGGTCTGA CAGCA TCAGACCGGCCGCTCTGGA TTTTTGTCTATGTGA TERM 829 1717449 - 1717409 - T 100 -32.1 -3.90048 | opp_overlap 1717408 1717409, overlap 1717407 GCTGCCCGAAAAACA CCAGAGCGGCCGGTCTGAC AGC ATCAGACCGGCCGCTCTGG ATTTTTGTCTATGTG TERM 830 1717409 - 1717449 + T 100 -31.4 -3.6328 | opp_overlap 1717409 1717407, overlap 1717408 GCTGCCCGAAAAACA CCAGAGCGGCCGGTCTGA CAGCA TCAGACCGGCCGCTCTGG ATTTTTGTCTATGTG Swit_1543 1718667 - 1717567 - | vanillate monooxygenase Swit_1544 1719090 - 1718785 - | ethyl tert-butyl ether degradation EthD Swit_1545 1720619 - 1719165 - | aldehyde dehydrogenase TERM 831 1720699 - 1720646 - R 76 -10.1 -3.93288 | gap 1, overlap 1720641 TCCGATGGAAGGAAA CAGCGTGCGTCGGCGGTCCGCCGATC CGG GATCAGCCGGC-GCCTACGGTCGCCG CAAAGTCGGCTATCG Swit_1546 1721534 - 1720677 - | alpha/beta hydrolase fold Swit_1547 1722764 - 1721775 - | fumarylacetoacetate (FAA) hydrolase TERM 832 1722367 - 1722349 - G 78 -12.4 -3.68024 | TTGGTGAAGACATAA GGCTCGCC AGT GGCAAGCC GGTCGTCCATCATCT Swit_1548 1723657 - 1722761 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Swit_1549 1724765 - 1723686 - | vanillate monooxygenase Swit_1550 1724953 - 1726014 + | Rieske (2Fe-2S) domain-containing protein Swit_1551 1726705 - 1726028 - | TetR family transcriptional regulator Swit_1552 1726791 - 1727894 + | Rieske (2Fe-2S) domain-containing protein TERM 833 1728263 - 1728223 - g 74 -11.8 -3.81146 | overlap 1728226 CTGCTGAAGGAAGAA TCACTGCAGGCGATCACC ATCGA GGCGATCGCCCGCAAGGC CGGCGTCAGCAAGGC TERM 834 1728260 - 1728226 - g 78 -16.5 -2.98947 | overlap 1728223 CTGAAGGAAGAATCA CTGCAGGCGATCACC ATCGA GGCGATCGCCCGCAA GGCCGGCGTCAGCAA Swit_1553 1728112 - 1728750 + | TetR family transcriptional regulator Swit_1554 1729961 - 1728756 - | major facilitator transporter TERM 835 1729756 - 1729721 - G 74 -13.3 -3.26596 | gap 1, overlap 1729713 1729716 TTGAAAGGAACGCAA CCCGGCGC-TCGCCGA ACCGA TCGACGAGGCGCCCGG CGACGGGAAAGGCCA TERM 836 1729926 - 1729912 - G 75 -6.4 -4.39426 | opp_overlap 1729925, overlap 1729925 GACACGCCGACAAAA CATCCC GCA AGGATG CGCCAGCCATCGCGC Swit_1555 1730558 - 1730019 - | hypothetical protein Swit_1556 1731066 - 1730674 - | hypothetical protein Swit_1557 1731226 - 1732542 + | homogentisate 1,2-dioxygenase Swit_1558 1732539 - 1733834 + | fumarylacetoacetase TERM 837 1733865 - 1733837 - T 91 -17.5 -3.34962 | GGCGACACGCTAGAA CTGCCGATCCGAT GAC ATCGGATCGGCCG CTACAGACCGAGCGG Swit_1559 1734935 - 1733892 - | vanillate monooxygenase Swit_1560 1735163 - 1735654 + | MarR family transcriptional regulator TERM 838 1736260 - 1736273 + G 78 -9.5 -4.19678 | opp_overlap 1736238, overlap 1736238 CGCCGACGTGCTGGT CGCCG CGGA CGGCG TTTATTCGCCTCTCC Swit_1561 1735790 - 1736923 + | hypothetical protein Swit_1562 1736972 - 1738324 + | major facilitator transporter Swit_1563 1739384 - 1738362 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 839 1738653 - 1738616 - G 75 -5.5 -4.58303 | gap 2, opp_overlap 1738644 1738645 CGAAATAGCAGAAAA GCGCGGAGGCGATGCGG TGTCGT CCG-A-CGCCGCCGAGC GGATTTCGATGCCCG Swit_1564 1740339 - 1739425 - | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1565 1741190 - 1740543 - | GntR family transcriptional regulator Swit_1566 1741341 - 1742336 + | ornithine cyclodeaminase TERM 840 1742473 - 1742463 - g 82 -8.2 -4.4078 | GCGCCTGAACGAAAA GGCG GTC CGCC ATGACGTCGCGCTGG Swit_1567 1742350 - 1743360 + | dihydrodipicolinate synthetase TERM 841 1743717 - 1743698 - g 100 -13.6 -4.45544 | CTGGAGGAAGGAAAA CCCTTCGC GGAG GCGAAGGG CGAGATCGCCTATGC Swit_1568 1743395 - 1744861 + | succinate semialdehyde dehydrogenase Swit_1569 1745057 - 1746634 + | monooxygenase, FAD-binding Swit_1570 1746631 - 1747377 + | short-chain dehydrogenase/reductase SDR Swit_1571 1747355 - 1748722 + | NADH:flavin oxidoreductase/NADH oxidase Swit_1572 1749583 - 1748738 - | alpha/beta hydrolase fold TERM 842 1749677 - 1749652 - R 100 -18.3 -4.4078 | GCCCTTCAATGAAAA GGGTGCGCCAG TCGC CCGGCGCACCC CTCATGGCTGGTTCG Swit_1573 1752088 - 1749698 - | TonB-dependent receptor TERM 843 1752448 - 1752435 - R 71 -9.5 -3.7108 | opp_overlap 1752442 ATGGTGATAGGGAAA CCCGG AGCC CCGGG GCAGGGTTAATCGAT Swit_1574 1752628 - 1752455 - | XRE family transcriptional regulator Swit_1575 1752855 - 1753103 + | hypothetical protein Swit_1576 1753621 - 1754463 + | hypothetical protein Swit_1577 1754476 - 1754652 + | hypothetical protein TERM 844 1754684 - 1754657 - T 86 -17.7 -2.59431 | overlap 1754653 GCCGGTCATAACCGA GGCGGCGGAGC TCTAAC GCCCCGCCGCC GCCCGTGACCACGAT Swit_1578 1756164 - 1754713 - | DNA methylase N-4/N-6 domain-containing protein Swit_1579 1757168 - 1756302 - | hypothetical protein TERM 845 1757053 - 1757079 + g 100 -11.5 -4.75174 | ACCTTCTTGGGCTTC GGGCCGTTCGG ATTTC CCGACTGGCCC TTTTTCCATTGGCTG TERM 846 1757331 - 1757321 - R 78 -6.8 -4.65895 | CTTCCTATGGAAAAA TCCG GAC CGGA TGACACCCCTCCCAT TERM 847 1757647 - 1757603 - R 100 -19.6 -4.10429 | gap 1, opp_overlap 1757597 1757611, overlap 1757604 AATCAGCTGCGAAAA GTCGACAATTCCCTGCCA-GA CATG TCGTGGCAGGGAATTGTCGAG CGAGACGCTTTAGGT TERM 848 1757646 - 1757604 - R 100 -23.1 -3.05775 | gap 1, opp_overlap 1757597 1757611, overlap 1757603 ATCAGCTGCGAAAAG TCGACAATTCCCTGCCA-GA CATG TCGTGGCAGGGAATTGTCGA GCGAGACGCTTTAGG TERM 849 1757611 - 1757639 + r 74 -12.6 -3.28712 | gap 1, opp_overlap 1757604 1757603, overlap 1757597 GCGAAAAGTCGACAA TTCCCTGCCA-GA CATG TCGTGGCAGGGAA TTGTCGAGCGAGACG TERM 850 1757923 - 1757894 - R 95 -11.3 -4.64676 | opp_overlap 1757896, overlap 1757897 TGAGGCTCAACAAAA GAAGGGGCAGCGC CGGA GCGCCGCCCCATG GCTTCGAGCTGCTGG TERM 851 1757920 - 1757897 - R 100 -17.4 -4.43307 | opp_overlap 1757896, overlap 1757894 GGCTCAACAAAAGAA GGGGCAGCGC CGGA GCGCCGCCCC ATGGCTTCGAGCTGC Swit_1580 1758853 - 1757942 - | hypothetical protein Swit_1581 1759009 - 1759275 + | hypothetical protein Swit_1582 1761292 - 1759691 - | glucose-methanol-choline oxidoreductase TERM 852 1761311 - 1761368 + r 86 -18.5 -2.52516 | overlap 1761312 1761314 GACAACTCCGCACGC CCGTCCGCCG-CCGCATCGGCCGACCT TGGATC AGGCCGGCCGATGCGGACGGAA-ACGG ATTAATAATGGAAAC TERM 853 1761314 - 1761369 + r 76 -13.5 -3.21099 | gap 4, overlap 1761312 1761311 AACTCCGCACGCCCG TCCG---CCG-CCGCATCGGCCGACCT TGGATC AGGCCGGCCGATGCGGACGGAAACGGA TTAATAATGGAAACC TERM 854 1761398 - 1761383 - R 71 -8.2 -3.8646 | overlap 1761378 1761384 GATTAATAATGGAAA CCGGCG CGGA CGCCGA ACTGGCGGGGCGGCG Swit_1583 1763544 - 1761370 - | TonB-dependent receptor TERM 855 1763099 - 1763082 - G 72 -8.3 -4.07568 | TGTTGCGGCCGAAAA GCGTCCC CTGC GGGCCGC GCAATATCTCCACCC Swit_1584 1764820 - 1763720 - | hypothetical protein Swit_1585 1765945 - 1764893 - | AraC family transcriptional regulator Swit_1586 1766064 - 1767425 + | Na+/melibiose symporter and related transporter-like protein TERM 856 1767741 - 1767777 + G 80 -15.8 -3.1739 | gap 1, opp_overlap 1767704, overlap 1767742 1767750 1767766 CGTCGGCAAGCCGAT CTCGGCCGCGCGCGCCG AGGC CGGCGT-CGCGGCCGGC TTCATCCGCTACTAT TERM 857 1767742 - 1767776 + G 79 -19.3 -2.50113 | gap 1, opp_overlap 1767704, overlap 1767741 1767750 1767766 GTCGGCAAGCCGATC TCGGCCGCGCGCGCCG AGGC CGGCGT-CGCGGCCGG CTTCATCCGCTACTA Swit_1587 1767433 - 1768902 + | aldehyde dehydrogenase Swit_1588 1769030 - 1769905 + | L-threonine ammonia-lyase TERM 858 1770450 - 1770470 + F 80 -4.6 -4.88736 | AGTTGGTCTCGTCGA TCAGCGTC TGCAC GGCGCCGA TTTTTCTCCCTGATG Swit_1589 1770483 - 1770794 + | hypothetical protein Swit_1590 1770981 - 1772120 + | ornithine cyclodeaminase TERM 859 1772130 - 1772157 + F 95 -17.8 -3.53012 | gap 1, overlap 1772116 CGCTGATCCCTCATG GGGGCCGGC-TTC GCT GAAGGCCGGCCCC TTTCCCCCGACAAGG Swit_1591 1772180 - 1772602 + | endoribonuclease L-PSP Swit_1592 1772631 - 1773923 + | FAD dependent oxidoreductase Swit_1593 1774909 - 1773902 - | helix-turn-helix domain-containing protein Swit_1594 1775484 - 1775095 - | hypothetical protein Swit_1595 1776043 - 1775471 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Swit_1596 1776572 - 1776069 - | Outer membrane receptor protein mostly Fe transport-like protein Swit_1597 1776604 - 1777056 + | hypothetical protein Swit_1598 1778441 - 1777290 - | acyl-CoA dehydrogenase domain-containing protein Swit_1599 1779898 - 1778444 - | AMP-dependent synthetase and ligase Swit_1600 1781392 - 1779902 - | AMP-dependent synthetase and ligase Swit_1601 1781914 - 1782495 + | hexapaptide repeat-containing transferase Swit_1602 1783274 - 1782492 - | short-chain dehydrogenase/reductase SDR Swit_1603 1783413 - 1784531 + | acyl-CoA dehydrogenase domain-containing protein Swit_1604 1784545 - 1785843 + | acyl-CoA dehydrogenase domain-containing protein Swit_1605 1785945 - 1787360 + | aldehyde dehydrogenase TERM 860 1787536 - 1787567 + T 93 -18.1 -3.32769 | opp_overlap 1787526 1787525, overlap 1787529 GAAATCGCTCTAGGA GCGGCTGGTCCGA TTGCCC TCGGATCAGCCGC TTCGTCATTTCCGCG TERM 861 1787760 - 1787730 - T 83 -16.9 -2.66964 | gap 1, opp_overlap 1787735, overlap 1787706 1787735 CGACCCACGATATGA CGACACCCGCCGCC TCGG GGCAGCGGGTG-CG TTGCGGTCTGCAATT TERM 862 1787756 - 1787735 - T 79 -15.1 -2.8511 | opp_overlap 1787735, overlap 1787706 1787730 CACGATATGACGACA CCCGCCGCC TCGG GGCAGCGGG TGCGTTGCGGTCTGC Swit_1606 1788905 - 1787787 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_1607 1789736 - 1788909 - | short-chain dehydrogenase/reductase SDR Swit_1608 1790173 - 1789748 - | dehydratase Swit_1609 1790616 - 1790170 - | hypothetical protein Swit_1610 1791327 - 1792601 + | TetR family transcriptional regulator TERM 863 1792693 - 1792660 - T 83 -17.6 -2.52464 | opp_overlap 1792648 1792651 CGCCGCTCCAACCGA CCATCGCGCGATCA TGGCAG TGATCACGCGATGG CGGGAGCGATTTCGA Swit_1611 1793956 - 1792772 - | lipid-transfer protein TERM 864 1793042 - 1793032 - G 70 -8.2 -3.85698 | overlap 1793006 GCCCTTCGGGACAAA GGCG GAG CGCC TCATACATGATCAGC Swit_1612 1794138 - 1795034 + | enoyl-CoA hydratase Swit_1613 1795031 - 1795468 + | hypothetical protein Swit_1614 1795642 - 1795941 + | hypothetical protein Swit_1615 1795948 - 1796997 + | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein TERM 865 1797159 - 1797135 - f 76 -8.6 -4.15565 | CTCATTATTCGAAAA TTCGCCGACA ACCGG TTTCGGCGAA CGAGATCCCACCCAG TERM 866 1797686 - 1797666 - g 83 -12.5 -4.08216 | CGACCCGCTGGAAAA GACGCCGGC AAG GCCAGCGCC CCGCGAACGGACGAC Swit_1616 1797189 - 1797731 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1617 1797728 - 1798897 + | amidohydrolase 2 TERM 867 1799510 - 1799493 - g 72 -14.1 -3.1994 | opp_overlap 1799492 GAGATCATCGATGAA GCCGGCG TTCC CGCCGGC GTCTTCAACCTGGTG Swit_1618 1798929 - 1800356 + | aldehyde dehydrogenase Swit_1619 1800636 - 1802141 + | carboxylesterase, type B Swit_1620 1802138 - 1802668 + | cupin 2 domain-containing protein Swit_1621 1802665 - 1804074 + | amidase Swit_1622 1804088 - 1805044 + | acetamidase/formamidase Swit_1623 1805162 - 1806619 + | glucose-6-phosphate 1-dehydrogenase TERM 868 1806655 - 1806629 - f 71 -9.4 -3.767 | GATTGATTGATGAAA TCCTCCCCACGC TTC ACGTAGGTAGGA CCTCAAAGGACGGGA Swit_1624 1806708 - 1808528 + | phosphogluconate dehydratase Swit_1625 1808534 - 1809502 + | glucokinase Swit_1626 1809499 - 1810122 + | 2-keto-3-deoxy-phosphogluconate aldolase TERM 869 1810942 - 1811000 + G 83 -15.3 -3.58305 | gap 2 ACTGGTACCGCCTGC TGGAAGCGGCG-ATCGGCCGGAG-GCTTC CCT GAAGCGCCCCGGCCGATCCGCCTCGATCA TTTGAAACCTTGCTT Swit_1627 1810122 - 1810973 + | aldo/keto reductase Swit_1628 1811957 - 1810998 - | xylose isomerase domain-containing protein Swit_1629 1812190 - 1812597 + | stress responsive alpha-beta barrel domain-containing protein Swit_1630 1813444 - 1812614 - | hypothetical protein TERM 870 1813404 - 1813365 - G 100 -20.8 -3.73224 | gap 1, opp_overlap 1813400 1813401 GCATTCCCCAGCAAA GCCAGGGCGGCCAGGGC GCATGAT GCCCTGACCGCCC-GGC CGCCTCGCCGCCGCT Swit_1631 1815744 - 1813444 - | TonB-dependent receptor TERM 871 1815783 - 1815804 + r 72 -2.1 -4.78839 | overlap 1815785 1815786 TGGTATCGATTACAT TTTAGCCCG GAAC CGGGCCGTA TTTTCTTATCCGCTT Swit_1632 1817589 - 1815907 - | glucose-methanol-choline oxidoreductase Swit_1633 1818188 - 1817586 - | hypothetical protein Swit_1634 1818437 - 1819573 + | oxidoreductase domain-containing protein Swit_1635 1819591 - 1820649 + | xylose isomerase domain-containing protein Swit_1636 1822144 - 1820702 - | major facilitator transporter Swit_1637 1822311 - 1823324 + | LacI family transcription regulator Swit_1638 1824239 - 1823364 - | transcriptional regulator IclR-like protein TERM 872 1824159 - 1824178 + g 76 -2.1 -4.68593 | opp_overlap 1824157, overlap 1824161 TTTATCCAGCGAAGT TGGCGAT CCAGCC ATCGCGA TTTTTCCATCCTGCG Swit_1639 1824253 - 1825032 + | 4-oxalocrotonate decarboxylase Swit_1640 1825035 - 1825979 + | acetaldehyde dehydrogenase Swit_1641 1825976 - 1827025 + | 4-hydroxy-2-ketovalerate aldolase Swit_1642 1827022 - 1827975 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 873 1828288 - 1828321 + G 87 -17.3 -3.39327 | GCGCGGCGAGACGCA GGCGGCGCGCGCGGC CGAA GCCGCGGGCGTCCCC TTCTGCCTGTCGGCC Swit_1643 1828001 - 1829188 + | FMN-dependent alpha-hydroxy acid dehydrogenase Swit_1644 1829236 - 1830060 + | methionine aminopeptidase, type I Swit_1645 1831007 - 1830162 - | methyltransferase type 11 Swit_1646 1831267 - 1831899 + | glutathione S-transferase domain-containing protein Swit_1647 1832799 - 1831930 - | GntR family transcriptional regulator Swit_1648 1833043 - 1833873 + | class II aldolase/adducin family protein Swit_1649 1833875 - 1835284 + | amidase TERM 874 1835333 - 1835305 - T 100 -17.5 -3.96148 | opp_overlap 1835305 TGCCGGGACGAGAAA GCCGCGGAGAC CAACCAT GTCTCCGCGGC TTCGTCTGTCCCGAT TERM 875 1835305 - 1835333 + T 91 -17.5 -3.322 | opp_overlap 1835305 TGCCGGGACGAGAAA GCCGCGGAGAC CAACCAT GTCTCCGCGGC TTCGTCTGTCCCGAT Swit_1650 1836208 - 1835348 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_1651 1837599 - 1836265 - | recombination factor protein RarA TERM 876 1837399 - 1837362 - G 70 -12.7 -3.3164 | opp_overlap 1837378, overlap 1837350 1837349 AACGCATGCCGACAA GATCGGCAAGCAGACGC GCCA GTGTCGTCTTGCCGATC CCCGGAGGCCCCCAG Swit_1652 1838458 - 1837745 - | hypothetical protein TERM 877 1838549 - 1838565 + r 71 -9.3 -3.73775 | overlap 1838547 GAGTGCCCGTTGACC CGCCCCC CGG GGCGGCG TTTCGTCCCGATCGA Swit_1653 1839416 - 1838592 - | alpha/beta hydrolase fold Swit_1654 1839735 - 1839433 - | NAD-dependent aldehyde dehydrogenase-like protein Swit_1655 1841073 - 1839796 - | major facilitator transporter TERM 878 1840058 - 1840029 - G 79 -5.6 -4.68103 | overlap 1840032 CGAAGCTGAACAAAA TCAGCACGACGG ACAGAA CCGCCACGCAGA AGCCACGCAGTTCGT Swit_1656 1843548 - 1841254 - | TonB-dependent receptor Swit_1657 1843822 - 1844787 + | alcohol dehydrogenase Swit_1658 1844837 - 1845616 + | short-chain dehydrogenase/reductase SDR Swit_1659 1845616 - 1846605 + | hypothetical protein TERM 879 1848014 - 1847998 - g 79 -15.1 -3.34895 | GTGATCCGCAACGAA GGGCCGC GCG GCGGCCC CGGTATGCGCGAGAT Swit_1660 1846690 - 1848396 + | dihydroxy-acid dehydratase Swit_1661 1848434 - 1849204 + | short-chain dehydrogenase/reductase SDR Swit_1662 1849355 - 1849786 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1663 1849787 - 1850515 + | hydroxyacylglutathione hydrolase Swit_1664 1850550 - 1851272 + | glutathione S-transferase domain-containing protein Swit_1665 1851353 - 1851766 + | hypothetical protein Swit_1666 1852718 - 1851963 - | short-chain dehydrogenase/reductase SDR Swit_1667 1854133 - 1852709 - | glutamine synthetase, catalytic region Swit_1668 1855408 - 1854161 - | hypothetical protein Swit_1669 1856153 - 1855425 - | short-chain dehydrogenase/reductase SDR Swit_1670 1856245 - 1857174 + | alpha/beta hydrolase domain-containing protein Swit_1671 1857351 - 1859549 + | TonB-dependent receptor TERM 880 1859708 - 1859682 - g 70 -12.3 -3.26471 | opp_overlap 1859686 TCATGGCGACACCAA TCCGCGCGG GCCGGGTTT CCGCGCGGA AACGGTGGCGGACAT TERM 881 1860133 - 1860075 - g 90 -19.5 -3.13403 | gap 2, overlap 1860073 GGGCCGGCAGGAACA CCGCTTCGTGCAGCAGGGGCAGCCCGCCG CCG CGACGGG--GCCCCTGCTGGTCGGCGCGG CGCGGGAGGCATCCC Swit_1672 1859560 - 1861713 + | hypothetical protein Swit_1673 1861792 - 1864065 + | TonB-dependent receptor TERM 882 1864162 - 1864127 - f 77 -13.2 -3.60431 | overlap 1864116 AAAATCATTGCCAAA GCGAGCCTGCTGTCCC TATA GCGAGGGCAGGCTCGC CATTCCCATCGATCG TERM 883 1864566 - 1864531 - g 74 -16.8 -2.70932 | gap 1 CCGCCTGGCCAACGA GTGCGCCGC-GGCCCGC TTC GCCGCCCGGCGGCGCAC CGCCGAGGACCTCCG Swit_1674 1864202 - 1864942 + | GntR family transcriptional regulator Swit_1675 1865064 - 1866152 + | luciferase family protein Swit_1676 1868509 - 1866230 - | TonB-dependent receptor TERM 884 1868681 - 1868667 - R 85 -2.8 -5.24647 | overlap 1868669 1868676 AGAGAGAAAATAAAA GGGAAA TTA TTTCAC CGCAGCGCCCGGCCG Swit_1677 1870012 - 1868678 - | major facilitator transporter Swit_1678 1870769 - 1870119 - | TetR family transcriptional regulator TERM 885 1870209 - 1870221 + g 71 -10.5 -3.71848 | opp_overlap 1870208 1870205 CTCCTTGAACACGAT GCCGG TCG CCGGC TTGTTGCTGGCCCAG TERM 886 1870900 - 1870879 - H 86 -6.5 -5.06414 | gap 1, opp_overlap 1870888, overlap 1870883 TCGGCGGAAGAAAAA CTGA-CGCGC TTC GCGCGATCCG GGCCGCGCGAACAGG Swit_1679 1871036 - 1871854 + | hypothetical protein TERM 887 1871933 - 1871947 + G 70 -8.5 -3.8709 | opp_overlap 1871908, overlap 1871943 CGGGGTCGAGGACCT CGCCG CCGCC CGGCG TTTCTACACCGATTT Swit_1680 1871886 - 1872791 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1681 1872805 - 1873782 + | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_1682 1873779 - 1874339 + | hypothetical protein TERM 888 1874406 - 1874453 + G 86 -22.6 -2.56046 | gap 1, overlap 1874432 AGCCGCTACCGACCC GGCCGGCC-CGGCCCCGGCGCCG GGC CGGCGGCGCGGCCGTGGTCGACC TGCATTGCCATTTCC Swit_1683 1874336 - 1875454 + | amidohydrolase 2 Swit_1684 1875460 - 1876581 + | monooxygenase, FAD-binding Swit_1685 1876578 - 1877867 + | fumarylacetoacetase Swit_1686 1878010 - 1879083 + | Rieske (2Fe-2S) domain-containing protein Swit_1687 1879084 - 1880100 + | vanillate monooxygenase TERM 889 1880141 - 1880114 - T 100 -12.7 -4.63486 | opp_overlap 1880131, overlap 1880116 AGCCCGTCAAGAAAA TACGGGCGTGG GATCAG CCACGCCCGTC GACATTCACCGCTGC TERM 890 1880139 - 1880116 - T 91 -15.3 -3.93367 | opp_overlap 1880131, overlap 1880114 CCCGTCAAGAAAATA CGGGCGTGG GATCAG CCACGCCCG TCGACATTCACCGCT Swit_1688 1882526 - 1880202 - | TonB-dependent receptor Swit_1689 1882819 - 1884462 + | hypothetical protein Swit_1690 1884465 - 1885571 + | histidinol phosphate aminotransferase TERM 891 1886413 - 1886441 + G 82 -18.2 -3.03124 | gap 1 CGATGCCGATCTCGA TCGCG-CGGCGGC GGGC GCCGCCGACGCGA TCTTCGGCAATGCCG TERM 892 1886645 - 1886698 + G 74 -13.8 -3.28712 | overlap 1886654 GTCCGGCGCGCGCGC GAAGCCGGCGCCGCCG-TCGTGACCG GCGG CGCGC-CGATCGACGGCCCCGGCTTC TTCTACCCGCCGACG TERM 893 1886654 - 1886695 + G 78 -12.9 -3.78934 | gap 1, overlap 1886645 GCGCGCGAAGCCGGC GCCGCCGTCGT-GACCGGCG GCG CGCCGATCGACGGCCCCGGC TTCTTCTACCCGCCG Swit_1691 1885568 - 1887052 + | aldehyde dehydrogenase Swit_1692 1887941 - 1887024 - | LysR family transcriptional regulator Swit_1693 1888069 - 1889277 + | mandelate racemase/muconate lactonizing protein TERM 894 1889314 - 1889285 - T 100 -17.9 -5.06816 | overlap 1889286 ACTGGTGAACAAAAA GGCGGCAGGGATC AGAA GATCCCTGCCGCA CGATAGACCGATCCG TERM 895 1889313 - 1889286 - T 100 -21.4 -3.63367 | overlap 1889285 CTGGTGAACAAAAAG GCGGCAGGGATC AGAA GATCCCTGCCGC ACGATAGACCGATCC Swit_1694 1889646 - 1889362 - | hypothetical protein Swit_1695 1890811 - 1889657 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Swit_1696 1892405 - 1890831 - | FAD dependent oxidoreductase TERM 896 1891562 - 1891617 + g 79 -15.4 -3.30441 | gap 3 GCGCCGACACCGTCG CGCGCCGC-CCGCGCACCGTCCGCCCG TCCTC CAGGCGGA-GGCCCGCGGCGCGGC-CG TTCTCGACGATGATC TERM 897 1893040 - 1893066 + G 72 -14.4 -3.17229 | overlap 1893038 TGGCGATGGGCGCGA GCAGCCCGGTGA GCA TCGCCGCGCTGC TGTTGCTGATCACCT Swit_1697 1892565 - 1893695 + | hypothetical protein Swit_1698 1893692 - 1894588 + | short-chain dehydrogenase/reductase SDR Swit_1699 1894617 - 1895606 + | ribokinase-like domain-containing protein Swit_1700 1897950 - 1895647 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 898 1896834 - 1896776 - G 81 -19 -2.71791 | gap 4, opp_overlap 1896779 1896788, overlap 1896775 ATGCCCGCGGCAAAG GTGCCGACCGCCTCGACGCGC-TCGGCCTG GCG CAG-CCGATGCGCGTCGCGGCGG-CG-CTC GGTGATGTCCTCGAA Swit_1701 1899292 - 1898042 - | major facilitator transporter Swit_1702 1901660 - 1899294 - | TonB-dependent receptor TERM 899 1902174 - 1902126 - g 77 -14.6 -3.15544 | gap 2, overlap 1902110 1902107 1902157 GCCGATCTGGACGAA GCCCGCTCGGCGCTGGCCGACCGC AAG ACGATCGACC-GCGCCAAG-GCGC TGCTGATGAAGAGCC Swit_1703 1901733 - 1902314 + | response regulator receiver/ANTAR domain-containing protein Swit_1704 1902311 - 1903543 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein TERM 900 1903532 - 1903543 + F 90 -2.2 -5.47399 | overlap 1903520 1903528 1903517 TATCTGGCCGGCCTG TCGC CCAG GTGA TTTTTTTGCACTTGC TERM 901 1903620 - 1903639 + F 75 -12.1 -3.53811 | opp_overlap 1903603 1903619 1903618 GCGCCCAGAGGAACC CGCCCCC AACGCC GGGGGCG TTTCCAGCGAATAGC TERM 902 1903661 - 1903700 + F 100 -9.2 -5.54079 | gap 1, opp_overlap 1903653 1903661 GCGAATAGCAGCAAA GCCGCTGTCCGATCCCCGC CAA GGGCCGATCGGA-GGCGGC TTTTTTCGTTTTTCC Swit_1705 1903736 - 1904980 + | major facilitator transporter TERM 903 1905025 - 1904991 - f 100 -22.9 -2.63596 | TCTGATCCTATATGA GGTGCGGGCGCCGTC AGGGA GACGGCGCCCGCATC CGGAAGGGGTTCCCA TERM 904 1905494 - 1905453 - g 87 -17.3 -3.28712 | gap 1, overlap 1905454 CGGCTTCCGCGACAA CGGCCAGACC-TTCGACGCG CTG CGCGTCGAATGGACCGGCCT GCCCCGCCTCAAGAT TERM 905 1905493 - 1905454 - g 85 -20.8 -2.57132 | gap 1, overlap 1905453 GGCTTCCGCGACAAC GGCCAGACC-TTCGACGCG CTG CGCGTCGAATGGACCGGCC TGCCCCGCCTCAAGA Swit_1706 1905040 - 1906245 + | hypothetical protein TERM 906 1906272 - 1906301 + F 86 -12.9 -4.07568 | gap 1, overlap 1906273 1906276 TGCAAAATTTTCACT TGAGCGATGGCGCG ATT CGCGCCATC-CTCC TTTTCGAACGGGCAA TERM 907 1906273 - 1906300 + F 84 -16.4 -3.04398 | gap 1, overlap 1906272 1906276 GCAAAATTTTCACTT GAGCGATGGCGCG ATT CGCGCCATC-CTC CTTTTCGAACGGGCA TERM 908 1906276 - 1906298 + F 75 -13.4 -3.08032 | overlap 1906273 1906272 AAATTTTCACTTGAG CGATGGCGCG ATT CGCGCCATCC TCCTTTTCGAACGGG TERM 909 1906408 - 1906452 + F 100 -32.3 -5.04601 | TCACGATGATGGCAA GGCCGCCATGCAGGCGCTGGA TCT TCCAGCGTCCGCATGGCGGCC TTTTTCGTTTCTGGA TERM 910 1908709 - 1908666 - g 72 -13.8 -3.14881 | gap 1 CAATGGCGGCATCAA GCTGCGCGGCACCGACC-TGC TGT GCAAGGTCGCGACCGAGCAGC AGGCGCTCGACCATA Swit_1707 1906477 - 1908996 + | assimilatory nitrite reductase (NAD(P)H) large subunit precursor Swit_1708 1908996 - 1909337 + | assimilatory nitrite reductase (NAD(P)H) small subunit Swit_1709 1909334 - 1911958 + | assimilatory nitrate reductase (NADH) alpha subunit apoprotein Swit_1711 1913426 - 1912698 - | enoyl-CoA hydratase/isomerase Swit_1710 1911945 - 1912841 + | uroporphyrin-III C-methyltransferase TERM 911 1913093 - 1913044 - GT 72 -13.5 -2.71712 | gap 1, overlap 1913043 1913069 CCGGCGCCGGGAAAG CTGAACGTCGCCTGCTCGACAACG ATG CGCCGCCC-GCAGGCGACGAGCAG GTCGGCGCCGGCCCC Swit_1712 1914007 - 1913423 - | cysteine dioxygenase type I Swit_1713 1915212 - 1914004 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 912 1915168 - 1915205 + g 81 -10.5 -4.34402 | gap 1, overlap 1915149 GGGCGCCGCGGCGGG CCCCCGATCCTTCTGGGC ATA GTCCTGACGG-TTGGGGG TTTTCATATGAGGAA Swit_1714 1915297 - 1916046 + | regulatory protein, IclR TERM 913 1916114 - 1916059 - T 71 -12.7 -3.08371 | gap 3 TAGACCTTGAAGAGA GCCTGATTCACGTCATCGGCGGAAGCGC GGA GCGCTTCCGCCTCAGAC--GA-TCAGGC TCTAGGCGTCATCCC Swit_1715 1917061 - 1916123 - | ornithine cyclodeaminase Swit_1716 1917603 - 1917070 - | peptidyl-prolyl cis-trans isomerase Swit_1717 1918823 - 1917600 - | amidohydrolase Swit_1718 1920510 - 1918840 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 914 1920615 - 1920568 - R 100 -16.5 -5.01732 | gap 1, opp_overlap 1920568 1920570, overlap 1920569 1920571 AATCGCGGTAAAAAA TGACCTGGAGCAGTCGATCTGA GGCAA TCAGATCGACTGCTCTAGG-CG TTCATGTGAACGTGG TERM 915 1920568 - 1920615 + r 95 -20.9 -3.26471 | gap 1, opp_overlap 1920568 1920569 1920571, overlap 1920570 AATCGCGGTAAAAAA TGACCTGGAGCAGTCGATCTGA GGCAA TCAGATCGACTGCTCTAGG-CG TTCATGTGAACGTGG TERM 916 1920614 - 1920569 - R 100 -20 -3.60316 | gap 1, opp_overlap 1920568 1920570, overlap 1920568 1920571 ATCGCGGTAAAAAAT GACCTGGAGCAGTCGATCTGA GGCAA TCAGATCGACTGCTCTAGG-C GTTCATGTGAACGTG TERM 917 1920570 - 1920614 + r 100 -22.4 -2.55668 | opp_overlap 1920569 1920568 1920571, overlap 1920568 TCGCGGTAAAAAATG ACCTGGAGCAGTCGATCTGA GGCAA TCAGATCGACTGCTCTAGGC GTTCATGTGAACGTG TERM 918 1920613 - 1920571 - R 100 -23.7 -3.37655 | opp_overlap 1920570 1920568, overlap 1920569 1920568 CGCGGTAAAAAATGA CCTGGAGCAGTCGATCTGA GGCAA TCAGATCGACTGCTCTAGG CGTTCATGTGAACGT Swit_1719 1922675 - 1920609 - | 5-oxoprolinase (ATP-hydrolyzing) Swit_1720 1922991 - 1922707 - | cupin 2 domain-containing protein Swit_1721 1923611 - 1923006 - | XRE family transcriptional regulator Swit_1722 1925957 - 1923654 - | TonB-dependent receptor TERM 919 1925742 - 1925754 + g 72 -3.3 -4.64591 | overlap 1925710 ATAATCGCCGGGCCG CTCGA TCT TCGCG TTTTCTATCTGCTTC Swit_1723 1927606 - 1926083 - | aldehyde dehydrogenase Swit_1724 1928912 - 1927629 - | FAD dependent oxidoreductase TERM 920 1927707 - 1927680 - G 70 -12 -3.30124 | gap 1 GCCGATCTCGTAGAA GGCCTGCTT-CGC GGC GCGGAAGCGGGCC GGCTCCAGCCGGGTG Swit_1725 1928960 - 1929940 + | LysR family transcriptional regulator Swit_1726 1930079 - 1930507 + | hypothetical protein Swit_1727 1932394 - 1930574 - | phosphogluconate dehydratase TERM 921 1932538 - 1932564 + r 83 -16.6 -2.96216 | CGCTTCGCGCGGTCT CCCTCCCCATGC AAG GCATGGGGAGGA TGTATCGTGCTACCC Swit_1728 1934069 - 1932684 - | major facilitator transporter Swit_1729 1934531 - 1934121 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 922 1936146 - 1936104 - g 82 -9.1 -4.4078 | gap 1 CTGGTGCAAGGAAAA GGTCGGCAGCATCAAGGCGC CGAA GCGCGTCGA-GCTGCGCACC GACATTCCGCGCAAC Swit_1730 1934680 - 1936230 + | AMP-dependent synthetase and ligase Swit_1731 1937464 - 1936286 - | acyl-CoA dehydrogenase domain-containing protein TERM 923 1937807 - 1937777 - H 95 -11 -4.42386 | overlap 1937779 TTGCCAGCCAGAAAA GACGAGGGAGCGCC CCT GACGCCCCGTCGAC CCGGGACAGATTGAA TERM 924 1937805 - 1937779 - H 78 -12.2 -3.82117 | overlap 1937777 GCCAGCCAGAAAAGA CGAGGGAGCGCC CCT GACGCCCCGTCG ACCCGGGACAGATTG Swit_1732 1937818 - 1938438 + | TetR family transcriptional regulator Swit_1733 1939257 - 1938451 - | metal-dependent hydrolase-like protein Swit_1734 1940399 - 1939293 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_1735 1942168 - 1940405 - | amidohydrolase 3 TERM 925 1942101 - 1942125 + g 74 -14.9 -3.05384 | CCCTGGATGCCGACA TCGGCGAGCCG CGC CGGCGCGCCGG TTCCGTCGACCAGCG Swit_1736 1943339 - 1942203 - | aldo/keto reductase Swit_1737 1943836 - 1943336 - | hypothetical protein Swit_1738 1945650 - 1943908 - | amidohydrolase 3 Swit_1739 1947382 - 1945757 - | glucose-methanol-choline oxidoreductase Swit_1740 1948305 - 1947379 - | alpha/beta hydrolase fold Swit_1741 1949513 - 1948317 - | epocide hydrolase domain-containing protein Swit_1742 1949741 - 1949538 - | hypothetical protein Swit_1743 1950987 - 1949758 - | cytochrome P450 Swit_1744 1951991 - 1951035 - | alpha/beta hydrolase fold Swit_1745 1952102 - 1953598 + | aldehyde dehydrogenase (acceptor) Swit_1746 1953615 - 1954400 + | short chain enoyl-CoA hydratase TERM 926 1954397 - 1954379 - T 78 -10.2 -4.07568 | CGCCTTCCTGGAAAA GCGCAAGC CGA GCTGGCGC TGAACCGCCCGAGTG TERM 927 1954534 - 1954561 + T 79 -11.3 -3.85817 | opp_overlap 1954535 1954539, overlap 1954535 1954539 AATGAAGCGAACAGC ACAAAGGCCGG GCGAAG CCGGCCTTTGC TTTCTCGAAAAGGGT TERM 928 1954535 - 1954560 + T 77 -14.8 -2.91276 | opp_overlap 1954535 1954539, overlap 1954534 1954539 ATGAAGCGAACAGCA CAAAGGCCGG GCGAAG CCGGCCTTTG CTTTCTCGAAAAGGG TERM 929 1954560 - 1954535 - T 75 -14.8 -2.78058 | opp_overlap 1954535 1954534 1954539, overlap 1954539 ATGAAGCGAACAGCA CAAAGGCCGG GCGAAG CCGGCCTTTG CTTTCTCGAAAAGGG TERM 930 1954539 - 1954556 + T 81 -9.8 -4.13995 | opp_overlap 1954535 1954539, overlap 1954535 1954534 AGCGAACAGCACAAA GGCCGG GCGAAG CCGGCC TTTGCTTTCTCGAAA TERM 931 1954556 - 1954539 - T 78 -9.8 -4.06786 | opp_overlap 1954539 1954535 1954534, overlap 1954535 AGCGAACAGCACAAA GGCCGG GCGAAG CCGGCC TTTGCTTTCTCGAAA Swit_1747 1956924 - 1954609 - | TonB-dependent receptor TERM 932 1958073 - 1958053 - g 73 -12.5 -3.53012 | GGCTGCCCCCGGAAA GCGGCAGCC GCT GGCTGCAGC GCACCACCCTCGCCG Swit_1748 1957200 - 1958153 + | taurine catabolism dioxygenase TauD/TfdA TERM 933 1958268 - 1958282 + T 84 -11.4 -4.18018 | GGGGGAGCGGGCCGG CGCGGT GAA ACCGCG TTTTCCCTGACGACG Swit_1749 1959495 - 1958302 - | amidohydrolase 2 Swit_1750 1960771 - 1959554 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_1752 1962176 - 1961085 - | acyl-CoA dehydrogenase domain-containing protein Swit_1753 1963272 - 1962271 - | amidohydrolase 2 Swit_1754 1964102 - 1963269 - | alpha/beta hydrolase fold Swit_1755 1964860 - 1964117 - | short-chain dehydrogenase/reductase SDR Swit_1756 1965774 - 1964857 - | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1757 1966324 - 1965797 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_1758 1967616 - 1966330 - | ring hydroxylating dioxygenase, alpha subunit TERM 934 1967657 - 1967694 + r 91 -16.9 -3.25823 | ATTGCTGACGCTGCG GCAGGGCGACGGACAGG CCGT CCAGTCCCTCGCCCAGC TTGATCTGGCACGAC Swit_1759 1967960 - 1967640 - | ferredoxin TERM 935 1967971 - 1967988 + r 71 -14.1 -2.61735 | overlap 1967970 1967975 ACCATCTCACCCTCC GGCGCCG GCTG CGGCGCC CTTGTCCGGTATTCG Swit_1760 1969259 - 1968057 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_1761 1969607 - 1971259 + | AMP-dependent synthetase and ligase Swit_1762 1971256 - 1972443 + | oxidoreductase domain-containing protein Swit_1763 1972552 - 1974090 + | acyl-CoA synthetase Swit_1764 1974133 - 1975275 + | acyl-CoA dehydrogenase domain-containing protein TERM 936 1975462 - 1975440 - f 71 -9.1 -3.72576 | gap 1, opp_overlap 1975456, overlap 1975453 CCCTCGCCCAGCAAA GC-GCGAGCG AGAA CGCCCGCCGC ACCGGCATGAGCCGG TERM 937 1975598 - 1975632 + G 70 -9 -3.92592 | overlap 1975599 GACGCCGCCGTCGAC CCGGCGGCGGCGGCCG CCA CGCTCGCCTCCGACGA TTTCATATTCGACGT Swit_1765 1975469 - 1976791 + | amidohydrolase 2 Swit_1766 1977483 - 1976803 - | isochorismatase hydrolase Swit_1767 1978649 - 1977513 - | amidohydrolase 2 Swit_1768 1979391 - 1978711 - | regulatory protein, TetR Swit_1769 1979906 - 1979487 - | hypothetical protein Swit_1770 1980862 - 1979903 - | hypothetical protein Swit_1771 1982138 - 1980885 - | acetyl-CoA acetyltransferase Swit_1772 1982336 - 1983115 + | short-chain dehydrogenase/reductase SDR Swit_1773 1983124 - 1983894 + | enoyl-CoA hydratase/isomerase Swit_1774 1986955 - 1983911 - | amidohydrolase TERM 938 1986446 - 1986416 - G 72 -14.7 -2.87132 | gap 1 GGTGCCCTGCACATA GGCGGTG-CGACCG CCGT CGGGCGACACCGCC GGGTGATAATCGTCC Swit_1775 1989992 - 1986960 - | amidohydrolase Swit_1776 1992234 - 1990030 - | TonB-dependent receptor TERM 939 1992303 - 1992284 - R 78 -5 -4.68655 | overlap 1992286 GAATGTCAAAACAAA TCCCCA CTCCCTTT TGGGGA TGGTCGATGGTTTTC Swit_1777 1993543 - 1992488 - | LysR family transcriptional regulator Swit_1778 1993979 - 1993617 - | cupin 2 domain-containing protein Swit_1779 1994941 - 1993976 - | alcohol dehydrogenase Swit_1780 1995829 - 1994954 - | hypothetical protein Swit_1781 1996590 - 1995838 - | short-chain dehydrogenase/reductase SDR TERM 940 1996452 - 1996408 - G 72 -14.7 -2.88249 | GATATCCGCGACATA GCCGCGGTGGCCGTCGCCCGG CAG CCGCGCGGCGACGGCCTCGGC CCGCGCCAGGTCCCG Swit_1782 1997450 - 1996587 - | intradiol ring-cleavage dioxygenase Swit_1783 1997941 - 1997450 - | hypothetical protein TERM 941 1998070 - 1998025 - R 100 -17.2 -4.20868 | gap 3 GCGGTAAAACAACAA CCTAGAGCGG--C-CGATCCGAT GTA ATCGGATCGTGAACCGCTCTAGG CGGAGGGTTCGACCT Swit_1784 1998992 - 1998066 - | LysR family transcriptional regulator Swit_1785 2000396 - 1999017 - | hypothetical protein Swit_1786 2000930 - 2000412 - | hypothetical protein Swit_1787 2001064 - 2001492 + | endoribonuclease L-PSP TERM 942 2001754 - 2001728 - g 78 -9.5 -4.12188 | gap 2, overlap 2001731 CGACTATCTCGAAAA GC-ATGGCG-CGC CGG GCGTCGCCATCGC CCGCAACATCCGCGC Swit_1788 2001513 - 2002607 + | amidohydrolase 2 Swit_1789 2003069 - 2002626 - | BadM/Rrf2 family transcriptional regulator Swit_1790 2003272 - 2004366 + | multicopper oxidase, type 3 Swit_1791 2004378 - 2005079 + | hypothetical protein Swit_1793 2005496 - 2006419 + | multicopper oxidase, type 3 TERM 943 2006807 - 2006777 - g 74 -13.2 -3.31792 | opp_overlap 2006777 2006788 GGACTATGCCGACAA GGCGCTGGTATCGC TGC GCGACACCCTCGCC TTCTCGCCCGGCGTC Swit_1794 2006562 - 2008556 + | TonB-dependent receptor Swit_1795 2008715 - 2008566 - | cytochrome oxidase maturation protein, cbb3-type Swit_1796 2010886 - 2008712 - | heavy metal translocating P-type ATPase TERM 944 2010458 - 2010430 - G 77 -14.6 -3.1855 | gap 1 TGCCCGAATAGGCAA GC-GTCGGCAGCG CGAT CGCCGCCGACAGC CAGTGGAACAGGTCC Swit_1797 2011673 - 2010891 - | integral membrane-like protein Swit_1798 2012731 - 2011853 - | cytochrome c oxidase, cbb3-type, subunit III Swit_1799 2012892 - 2012722 - | Cbb3-type cytochrome oxidase component Swit_1800 2013624 - 2012899 - | cytochrome c oxidase, cbb3-type, subunit II Swit_1801 2015271 - 2013631 - | cytochrome c oxidase, cbb3-type, subunit I TERM 945 2015692 - 2015670 - g 71 -9.8 -3.7282 | overlap 2015673 2015674 CCATCTTACCAACAA CAAGGTCGCC GTC GGCGACGTCG CCGAACTCATCCGGA Swit_1802 2015608 - 2016054 + | MucR family transcriptional regulator Swit_1803 2016176 - 2016949 + | short chain enoyl-CoA hydratase Swit_1804 2018050 - 2016959 - | endonuclease/exonuclease/phosphatase TERM 946 2018111 - 2018126 + H 73 -3.2 -4.72986 | opp_overlap 2018098 2018099, overlap 2018104 AAGCCGCACCGGTCC GGCG CGCGAAAC CGCC TTTTTCGTGCCGATG Swit_1805 2018139 - 2019371 + | hypothetical protein Swit_1807 2021567 - 2020197 - | glycosyl transferase, group 1 Swit_1806 2019374 - 2020282 + | hypothetical protein Swit_1808 2022312 - 2022977 + | ECF subfamily RNA polymerase sigma-24 factor Swit_1809 2022964 - 2023920 + | anti-FecI sigma factor, FecR Swit_1810 2023934 - 2026246 + | TonB-dependent receptor Swit_1811 2026233 - 2026982 + | polysaccharide deacetylase TERM 947 2027026 - 2026988 - f 83 -5.2 -5.0133 | gap 1, overlap 2026989 2027011 2027015 GACGGCCTGAAAAAA TCGTCGCGCCGC-CG TGCGGGAAAG CGAGCGCCGCGACGT CCTCGCTGCGAAATG Swit_1812 2027061 - 2027966 + | hypothetical protein Swit_1813 2027963 - 2028475 + | hypothetical protein TERM 948 2029523 - 2029467 - g 87 -23 -2.74523 | gap 1, overlap 2029426 2029464 CCAGGGCGAACAGTA CCGGCCGGCGAGCAGCCGGTCGGCCGC CGCC GCGATCGATCGGCTGCTCGCCCGC-GA CTTCGGCGGGCTCCA Swit_1814 2028472 - 2029647 + | glycosyl transferase, group 1 TERM 949 2030053 - 2030071 + G 77 -17.4 -2.53995 | opp_overlap 2030045 2030046 TCAGCAACCCGCTCC GCCGCCCG GGC CGGGCGGC TCCGTTCCAATGGCT Swit_1815 2029659 - 2030804 + | glycosyl transferase, group 1 Swit_1816 2031576 - 2030848 - | protein of unknown function DUF306, Meta and HslJ Swit_1817 2032986 - 2031664 - | erythromycin esterase TERM 950 2031731 - 2031711 - G 72 -14 -3.13403 | opp_overlap 2031719, overlap 2031709 2031714 GCGTGGCGATGAAGA CGACCGCG TCCAT CGCGGTCG CGGGGGATATCTCGG Swit_1818 2034524 - 2032983 - | beta-lactamase TERM 951 2034124 - 2034103 - G 79 -11.5 -4.06384 | opp_overlap 2034107 TTCGAATACCAGAAA TGCGCGCCG GGCG CGGTGCGCA GCTCGACATCGTTCG Swit_1819 2035642 - 2034596 - | hypothetical protein TERM 952 2035582 - 2035551 - G 74 -11.6 -3.72576 | gap 1, opp_overlap 2035544 CCGGTCTTGAGGAAA CCGCTGT-CGTCGGC GTC GCCGAGGAACAGCAG ATAGGGGCGCGGCAG Swit_1820 2037132 - 2035639 - | D-glutamate deacylase TERM 953 2036050 - 2036074 + g 79 -15.7 -3.28416 | CGGCGGGTCGCGCAG CAGCGCGGCGA TCG TCGCCTCGCTG TTCATGTGCATGATC Swit_1821 2039267 - 2037129 - | TonB-dependent siderophore receptor Swit_1822 2039448 - 2040377 + | RpiR family transcriptional regulator TERM 954 2040397 - 2040439 + F 71 -5.6 -4.36554 | opp_overlap 2040403, overlap 2040401 2040403 2040404 2040406 GCGGGACACCGCCGG TGAAGACGATCATCCCGG ACCTGAC CCGGGATGATCATGTTAG TTTATTGTCATAATC TERM 955 2040403 - 2040433 + F 71 -11.2 -3.43568 | opp_overlap 2040403, overlap 2040401 2040397 2040404 2040406 CACCGCCGGTGAAGA CGATCATCCCGG ACCTGAC CCGGGATGATCA TGTTAGTTTATTGTC TERM 956 2040433 - 2040403 - f 78 -14.8 -3.01924 | opp_overlap 2040403 2040401 2040397 2040404 2040406 CACCGCCGGTGAAGA CGATCATCCCGGAC CTG ACCCGGGATGATCA TGTTAGTTTATTGTC TERM 957 2040404 - 2040432 + F 74 -14.7 -2.65056 | opp_overlap 2040403, overlap 2040403 2040401 2040397 2040406 ACCGCCGGTGAAGAC GATCATCCCGG ACCTGAC CCGGGATGATC ATGTTAGTTTATTGT Swit_1823 2040495 - 2041559 + | mandelate racemase/muconate lactonizing protein TERM 958 2041697 - 2041673 - g 74 -13.5 -3.36289 | opp_overlap 2041657 2041656 2041676 GACGACGCCAATGAA GGCCGCGCGAC GGG ATCGCGGGGCC ATCTGCGCGCCGCCG Swit_1824 2041547 - 2043151 + | peptidase M28 Swit_1825 2043732 - 2043136 - | TetR family transcriptional regulator TERM 959 2043600 - 2043585 - G 75 -10.4 -3.99957 | overlap 2043589 GGAAATATTGATAAA GCGAGC CGAT GCTCGC CCCCGCCTTCTCCGC Swit_1826 2044793 - 2043894 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 960 2044520 - 2044489 - G 81 -12.2 -3.90744 | gap 1, overlap 2044490 TCGGTCGCGAAATAA TCGG-CGACGCAGCG TTT CGCCGCGCCGGCCGC ATCGCCGTCGCGCAG TERM 961 2044519 - 2044490 - G 72 -15.7 -2.94232 | gap 1, overlap 2044489 CGGTCGCGAAATAAT CGG-CGACGCAGCG TTT CGCCGCGCCGGCCG CATCGCCGTCGCGCA Swit_1827 2045647 - 2044790 - | alpha/beta hydrolase fold Swit_1828 2046835 - 2045666 - | acyl-CoA dehydrogenase type 2 Swit_1829 2047946 - 2046849 - | Rieske (2Fe-2S) domain-containing protein TERM 962 2047124 - 2047167 + g 88 -15.2 -3.78934 | gap 1 TCCGCCGCGCCGCGG CCTTCAGCGCCTCGTCGGGGG CGT CCCCCGGCGAC-CGCAGCAGG TTGTTGTGCCAGACC TERM 963 2047863 - 2047842 - G 78 -13.7 -3.61398 | gap 1 GTCCTTGCCGAAGAA GCGCAGCGCC AGC GGCGC-GCGC CCGAGTTCGGCGGCG Swit_1830 2049756 - 2047993 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 964 2049115 - 2049064 - G 72 -13.7 -3.15544 | gap 2 GCGGAGCGCGAGGAA CAGCCGGC-CGACCAGCGCCT-CGC CCAT GCACAGCCGCCGGTCGCGCCCGCCG CGCAGCCGCGCCTTG TERM 965 2050820 - 2050810 - g 70 -8.2 -3.91897 | overlap 2050811 GCCTTCACCGAGAAA CGCG CGC CGCG CTGGGCCCCCTATTC Swit_1831 2049769 - 2050866 + | enoyl-CoA hydratase/isomerase Swit_1832 2050863 - 2051330 + | dehydratase TERM 966 2053069 - 2053108 + G 77 -11.5 -3.86015 | gap 3, overlap 2053069 CCGCGCCGACCGCGA C-CGGC-GCCGGAC-AGGCC GCC GGCCTCGTCCGCCTGCCGAG TTTCTGCGCGGGGTG Swit_1834 2051811 - 2055326 + | 2-oxoacid ferredoxin oxidoreductase Swit_1835 2055358 - 2056503 + | lipid-transfer protein Swit_1836 2056639 - 2057796 + | acyl-CoA dehydrogenase domain-containing protein TERM 967 2058485 - 2058518 + G 71 -11.6 -3.65046 | overlap 2058484 GGCGCTGAAGCGGCT CGGCACCGCCGACG AGGTGG CGGAGGCGGTGCTG TTCTTCGCCTCGCAC Swit_1837 2057793 - 2058590 + | short-chain dehydrogenase/reductase SDR TERM 968 2058704 - 2058737 + G 77 -10.9 -3.83205 | gap 1 CGCTGATGAGGGCGC TGGCCGACGC-CGGCG CCG CGCTGCGCGACGTCCA TTTCGTCTCGCCGCT TERM 969 2059600 - 2059627 + G 77 -17 -2.64735 | gap 1 GACTTCGTCCGCGGG GCGCGGCGGTCGC ACG GCGGCCGC-GCGC TGATCTGCCTGCCGT Swit_1838 2058571 - 2059854 + | acetyl-CoA hydrolase/transferase Swit_1839 2059851 - 2061545 + | 3-oxosteroid 1-dehydrogenase Swit_1840 2062336 - 2061542 - | enoyl-CoA hydratase/isomerase Swit_1841 2064018 - 2062333 - | AMP-dependent synthetase and ligase TERM 970 2062897 - 2062930 + g 74 -10.9 -3.78934 | overlap 2062899 GCGGATCGACACGCT CACCCCGACCAGCGG GGTG CCGCTGGTCCGCGTC TTCTTGTCGACGCCG TERM 971 2062899 - 2062928 + g 76 -13.5 -3.4811 | overlap 2062897 GGATCGACACGCTCA CCCCGACCAGCGG GGTG CCGCTGGTCCGCG TCTTCTTGTCGACGC Swit_1842 2064249 - 2065412 + | acyl-CoA dehydrogenase domain-containing protein Swit_1843 2065456 - 2065776 + | ferredoxin Swit_1844 2066072 - 2065767 - | hypothetical protein Swit_1845 2066179 - 2066892 + | TetR family transcriptional regulator TERM 972 2066911 - 2066897 - T 73 -12.8 -3.22884 | TGACCAAGTGAGGAA GGCCGC CTA GCGGCC GGAGATGCTCCGCTG Swit_1846 2067694 - 2066903 - | enoyl-CoA hydratase Swit_1847 2067811 - 2068992 + | cytochrome P450-like protein Swit_1848 2069023 - 2069994 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1849 2070004 - 2070414 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1850 2070411 - 2071601 + | acyl-CoA dehydrogenase domain-containing protein Swit_1851 2071605 - 2072681 + | acyl-CoA dehydrogenase domain-containing protein Swit_1852 2072678 - 2073214 + | hypothetical protein Swit_1853 2073211 - 2073690 + | hypothetical protein Swit_1854 2074476 - 2073703 - | short-chain dehydrogenase/reductase SDR Swit_1855 2075724 - 2074519 - | acetyl-CoA acetyltransferase Swit_1856 2077179 - 2075725 - | 3-oxoacyl-(ACP) synthase III Swit_1857 2077422 - 2077790 + | thioesterase superfamily protein Swit_1858 2077948 - 2080299 + | sulfatase TERM 973 2080575 - 2080549 - T 100 -14.5 -4.83615 | gap 1, overlap 2080524 2080551 TAGCTTTGACAAAAA GAGAGGGCGGCA TCGC TGCCGCCCTC-C ATCGCCCCCGCCGGG TERM 974 2080574 - 2080551 - T 100 -18.2 -4.03995 | overlap 2080524 2080549 GCTTTGACAAAAAGA GAGGGCGGCA TCGC TGCCGCCCTC CATCGCCCCCGCCGG Swit_1859 2082933 - 2080603 - | TonB-dependent receptor, plug Swit_1860 2083272 - 2084930 + | hypothetical protein Swit_1861 2084959 - 2085330 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_1862 2086064 - 2085315 - | hypothetical protein Swit_1863 2087436 - 2086144 - | major facilitator transporter Swit_1864 2088632 - 2087433 - | diaminopropionate ammonia-lyase TERM 975 2088576 - 2088600 + g 82 -4.3 -4.9725 | overlap 2088561 2088577 CCGGCCCAGCATGAG CCGATCCATTT CCG AAATAGATCGA TTTTTCTCTGGAAGT Swit_1865 2089237 - 2088710 - | GCN5-related N-acetyltransferase Swit_1866 2090550 - 2089234 - | aryldialkylphosphatase TERM 976 2090297 - 2090351 + g 86 -19.4 -3.21395 | gap 3, overlap 2090299 2090300 GGCCAGCCGGCCTGC TGCATCCGCCGCCGCA-CCGCCGGGGG AACG TCGTCGGCGGATGCGGCGGCGG--GCA TGTTCTCGAACCAGT TERM 977 2090299 - 2090353 + g 87 -18 -3.29144 | gap 3, overlap 2090297 2090300 CCAGCCGGCCTGCTG CAT--CCGCCGCCGCA-CCGCCGGGGG AACG TCGTCGGCGGATGCGGCGGCGGGCATG TTCTCGAACCAGTCG TERM 978 2090300 - 2090350 + g 85 -21.1 -2.52623 | gap 1, overlap 2090297 2090299 CAGCCGGCCTGCTGC ATCCGCCGCCGCA-CCGCCGGGGG AACG TCGTCGGCGGATGCGGCGGCGGGC ATGTTCTCGAACCAG Swit_1867 2091989 - 2090547 - | amidohydrolase Swit_1868 2094831 - 2092024 - | TonB-dependent receptor TERM 979 2094900 - 2094916 + r 71 -8.7 -3.92542 | CATCGAGATGCGTCG CCGATCT TCT GGATCGG TTATTTCCGCATCGA Swit_1869 2096071 - 2095046 - | hypothetical protein TERM 980 2095999 - 2095941 - G 100 -17.3 -3.91897 | gap 1 CCGGCGACGTAGAAA TGGCCGATCGCAGCGATGGCGGGC-AGG CCGC CCTCGCCCGCCGCCGCCGCGTGCGAACA GGCCAGGATCGCCAG Swit_1870 2096760 - 2096182 - | AsnC family transcriptional regulator Swit_1871 2097493 - 2096726 - | kinase-like protein TERM 981 2097177 - 2097197 + gr 88 -16.1 -3.28712 | TCCCAGGCGTCGGCC GGCGCGCGG TCG TCGCGCGCC TTGTCGAAGCGGGGC Swit_1872 2098499 - 2097540 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Swit_1873 2099490 - 2098534 - | helix-turn-helix domain-containing protein TERM 982 2100283 - 2100254 - g 71 -9.9 -3.76402 | gap 1, overlap 2100227 2100225 AGGCGACCCACGAAA GCTCCTT-CGCCGC CGC GCGGCGGACGGTGC GCGAGAAGCTGGGCG Swit_1874 2099602 - 2100912 + | Rieske (2Fe-2S) domain-containing protein Swit_1875 2100909 - 2101397 + | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_1876 2101394 - 2101978 + | isochorismatase hydrolase Swit_1877 2101975 - 2102766 + | short chain dehydrogenase Swit_1878 2102763 - 2104334 + | FAD dependent oxidoreductase Swit_1879 2105815 - 2104331 - | putative indolepyruvate oxidoreductase subunit B TERM 983 2105302 - 2105286 - G 90 -13.7 -4.07568 | overlap 2105290 GCCTCGCGCGGAAAA GGCAGCG CGC CGCTGCC GCCGAGCGCGCCGAA Swit_1880 2107941 - 2105815 - | indolepyruvate ferredoxin oxidoreductase TERM 984 2106772 - 2106736 - G 95 -15.1 -4.08394 | gap 1 ACAGCCGGTGCAAAA GCCGGCCG-GGCGCTG CGGGAT CTGCGCCGCGACCGGC GCCGGCAGCGGCGCG TERM 985 2107602 - 2107556 - G 70 -12.3 -3.28924 | opp_overlap 2107590, overlap 2107557 GAGCCTTCGCCATAA TCCTC-GCCGACGATCACCAGCG CGC CGCCGGTGA-CGCCGCCCGAGGC GACGTTGGAGAGCGC TERM 986 2107601 - 2107557 - G 73 -15.8 -2.57211 | opp_overlap 2107590, overlap 2107556 AGCCTTCGCCATAAT CCTC-GCCGACGATCACCAGCG CGC CGCCGGTGA-CGCCGCCCGAGG CGACGTTGGAGAGCG Swit_1881 2108737 - 2107934 - | cyclase family protein Swit_1882 2108824 - 2109288 + | MarR family transcriptional regulator Swit_1883 2110001 - 2109390 - | 2-keto-3-deoxy-phosphogluconate aldolase Swit_1884 2111212 - 2110004 - | oxidoreductase domain-containing protein TERM 987 2110904 - 2110916 + g 75 -10.5 -4.10161 | opp_overlap 2110904 GTCGGGGCCGAAGAA GCCGC CCA GCGGC TTTTCGCAGATGATG Swit_1885 2112581 - 2111229 - | major facilitator transporter Swit_1886 2114131 - 2112674 - | mannitol dehydrogenase domain-containing protein Swit_1887 2115528 - 2114128 - | glucuronate isomerase TERM 988 2115549 - 2115573 + r 71 -9.1 -3.70751 | overlap 2115535 2115549 2115542 CACCGCGCGGGCGAA GCGGGCGCGGG TGT CCTGCGCCGCC TTCTTGGCCTTCTTG Swit_1888 2116298 - 2115525 - | GntR family transcriptional regulator Swit_1889 2116409 - 2117617 + | mandelate racemase/muconate lactonizing protein TERM 989 2118344 - 2118392 + G 77 -17.4 -2.52464 | opp_overlap 2118380, overlap 2118385 ATGGCCGGCACCGGA TCGCCCCGCCCCGC-GCGGTCGTC GCG GTCGACAGCAGCGGCGCGGG-CGA TGCCTTCAACGCCGG Swit_1890 2117611 - 2118540 + | 2-keto-3-deoxygluconate kinase Swit_1891 2118643 - 2119440 + | GntR family transcriptional regulator Swit_1892 2119526 - 2120440 + | xylose isomerase domain-containing protein Swit_1893 2120550 - 2121464 + | xylose isomerase domain-containing protein Swit_1894 2121489 - 2123177 + | glucose-methanol-choline oxidoreductase Swit_1895 2123174 - 2123806 + | hypothetical protein TERM 990 2124320 - 2124275 - g 87 -17.7 -3.31144 | TGTCGACGCCTACAA GATCGGC-GCGGCCAGGCGCC GCGACT GGCGCCTCGC-GCTGCCGATC CGATCGGTCGAGAAG Swit_1896 2123877 - 2124902 + | xylose isomerase domain-containing protein Swit_1897 2124945 - 2125238 + | hypothetical protein Swit_1898 2125235 - 2126779 + | SSS family solute/sodium (Na+) symporter TERM 991 2127309 - 2127338 + G 80 -17.2 -2.87683 | gap 1 GGACTGTTCGACACG GCCGCAGCGGCGC CGCTC GCGC-GCTGCGGC TATGTCGCCGACTAT Swit_1899 2126787 - 2127395 + | hypothetical protein Swit_1900 2129535 - 2127373 - | quinoprotein glucose dehydrogenase TERM 992 2129949 - 2129909 - H 74 -9.6 -3.87994 | gap 1, opp_overlap 2129909 2129908 ATCGAGGCTGATAAA CCGGGTCCGTTGGTAGCGA TGGC CCGC-ACCGCCGGACCAGG ATTTGACGGGACGGC Swit_1901 2130061 - 2132295 + | TonB-dependent receptor Swit_1902 2132295 - 2133194 + | xylose isomerase domain-containing protein TERM 993 2133223 - 2133265 + G 72 -13.9 -3.14132 | CGCGCTGATGCTGGC GGCGGCCGCCCCGGCGGCG CCCGA CCCCGCCGCGGTCGACGCC TTCCTCCGCCGCGCC Swit_1903 2133191 - 2133715 + | hypothetical protein Swit_1904 2136000 - 2133733 - | malic enzyme Swit_1905 2136429 - 2136133 - | hypothetical protein Swit_1906 2137222 - 2136443 - | short chain enoyl-CoA hydratase TERM 994 2137154 - 2137197 + g 74 -16.1 -2.80443 | overlap 2137158 GGTGATCGCGTTGAG CGCATCGGGCCGATCGAG-CG TGAT CGTCGCGATCGGCCCGGT-CG TCTCATAGCGTATCG TERM 995 2137158 - 2137194 + g 73 -16.6 -2.66634 | gap 1, overlap 2137154 ATCGCGTTGAGCGCA TCGGGCCGATCGAG-CG TGAT CGTCGCGATCGGCCCGG TCGTCTCATAGCGTA Swit_1907 2137947 - 2137234 - | hypothetical protein TERM 996 2137565 - 2137518 - G 91 -21.2 -3.04144 | overlap 2137543 CGTTGAGGCCGAACA GCGCGGCGGGGAGCGGCGGC ACCAACCG GCCGCCGCTGGCCGCCGCGG ATCGCAGCAGGCCGG Swit_1908 2139155 - 2137944 - | extracellular ligand-binding receptor Swit_1909 2140717 - 2139152 - | acyl-CoA synthetase Swit_1910 2142965 - 2140755 - | TonB-dependent receptor Swit_1911 2144219 - 2143110 - | AraC family transcriptional regulator TERM 997 2144728 - 2144710 - g 72 -13.2 -3.14564 | opp_overlap 2144710 2144707 2144712 CGAGCGCGGCACCAA GAGCATCG ACA CGATGCTC TACTTCCTGCTGTTC TERM 998 2144935 - 2144914 - g 70 -15.1 -2.74192 | opp_overlap 2144913 2144910, overlap 2144911 2144916 GATGGTGGAACATGA CACGCGGGC CTCC GCCCGCGCG GTCGATTCGCTGCTC TERM 999 2145970 - 2146025 + G 84 -20.5 -2.87683 | GATATTGGTGCTCGA GGCCGGC-CGCGTCGTCGAGCGCGGCA CCCA TGCCGCGCT-GATGGCGCGCGACGGGC TCTATGCCGACATGT Swit_1912 2144270 - 2146084 + | ABC transporter related TERM 1000 2146273 - 2146246 - f 71 -14 -2.65766 | overlap 2146236 TGAAAGCGGACAGGA CCCCGGCCTCCC GCCG GGGTGGCAGGGG AATAATCAGGCGTGC TERM 1001 2146935 - 2146992 + G 87 -17.7 -3.2614 | GATGGGGACCCTGGT CGCGGCGCT-GTGGCTGCGCTGGCGCG AGGCGC CGCGGCGGCCC-GCCACGATCGCCGCG TTGCTCTCGGCCATC Swit_1913 2146285 - 2147355 + | acyltransferase 3 Swit_1914 2147412 - 2149178 + | ATP-dependent DNA helicase RecQ Swit_1915 2149192 - 2149608 + | hypothetical protein TERM 1002 2149647 - 2149621 - T 86 -13.1 -3.96506 | gap 1 TAGGCCAAAACAGAA TC-TCCCTCCCC TTGA GGGGAGGGATGA AAGGGTGGGGTACGC TERM 1003 2149660 - 2149692 + T 77 -13.4 -3.30124 | opp_overlap 2149669 TGAAAGGGTGGGGTA CGCAGTGAAGGGGC TCGAT GCCCCTTCACGGAG TTCTGCGGGATGGCC Swit_1916 2150465 - 2149773 - | endonuclease/exonuclease/phosphatase TERM 1004 2150556 - 2150531 - R 100 -18.3 -5.95946 | opp_overlap 2150529 TCAACAACAAAAAAA GGGCCGATGGG TTGC CCCACCGGCCC AGTGCGTTCGCAGGA Swit_1917 2151965 - 2150616 - | ammonium transporter Swit_1918 2152318 - 2151980 - | nitrogen regulatory protein P-II Swit_1919 2153036 - 2152485 - | hypothetical protein Swit_1920 2153866 - 2153033 - | patatin Swit_1921 2155324 - 2153894 - | peptidase U62, modulator of DNA gyrase Swit_1922 2155748 - 2155542 - | hypothetical protein Swit_1923 2156169 - 2156543 + | hypothetical protein Swit_1924 2156617 - 2157585 + | sporulation domain-containing protein Swit_1925 2157924 - 2157640 - | hypothetical protein Swit_1926 2158642 - 2159622 + | ABC transporter related Swit_1927 2159622 - 2161217 + | L-aspartate oxidase TERM 1005 2161299 - 2161245 - f 72 -11.6 -3.32844 | gap 3, opp_overlap 2161232 2161245, overlap 2161271 GCGGCCATTTGAGAA GGGCCTGATTCACGCCGTCGGCGAAAG CGCG CTTCCGC-GTCGG-ACGAA-CAGGCCC TACTATCCGGACCAT Swit_1928 2161313 - 2162443 + | Na+/H+ antiporter NhaA TERM 1006 2162437 - 2162483 + T 84 -15.9 -3.34192 | gap 1, opp_overlap 2162444, overlap 2162476 GTGGACGGGGAAGGT CACCTAACC-CGTCATCCCGGC GAAA GCTGGGATGACGAGGGTGGGCG TTACTTGCCCAGCTT TERM 1007 2162475 - 2162444 - T 84 -16.6 -3.07994 | opp_overlap 2162437 GGGAAGGTCACCTAA CCCGTCATCCCGGC GAAA GCTGGGATGACGAG GGTGGGCGTTACTTG Swit_1929 2163014 - 2162484 - | hypothetical protein TERM 1008 2162940 - 2162897 - G 73 -16.1 -2.64616 | gap 3, opp_overlap 2162919 CGGCCAGCGACAGCA GGCCGAAGCGGGTCGCGAGCGC CGC GCGCTCG-G-CC-GCGTCGGCC TCGATCGCGATCGTC Swit_1930 2163532 - 2163011 - | hypothetical protein Swit_1931 2163681 - 2164163 + | SmpA/OmlA domain-containing protein TERM 1009 2164196 - 2164213 + T 74 -12.7 -3.30701 | overlap 2164189 CCTCAGGCGCCGGGC GCAGGGC ATCC GCCCTGC TTGGCTTTCCTCGCA TERM 1010 2164294 - 2164312 + T 100 -16 -5.19819 | GGCCGTTCGGCCTTG CGGAGCCC TGT GGGCTCCG TTTTTCGTTTTCTTT TERM 1011 2164412 - 2164430 + T 83 -13.2 -3.85698 | GACATGGATGCCAGC CTTCAGCC TTT GGCTGAAG TTTATCCCGAGCGCC Swit_1932 2165493 - 2164498 - | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 1012 2165505 - 2165517 + r 78 -10.5 -4.09685 | TCATGCCTTCACTCC GGCGC CGC GCGCC TTTTCCGCGGTGGGA Swit_1933 2166527 - 2165490 - | O-sialoglycoprotein endopeptidase TERM 1013 2165941 - 2165902 - G 75 -9.9 -4.05446 | gap 1, overlap 2165903 CCGGCGAAGGAGAAA TGCGGCTCGCCGCTGCCG ACCAG CGGACGCGGC-AGCGGCA CCGCCCTGGGATCGC TERM 1014 2166679 - 2166734 + G 87 -19.6 -3.04792 | gap 1 GATCGCCCTCGCCCA GCCTCGACCGTCGCCGCGCGCCGCCTG GCT CGCGCGGCGCGTGCCGGC-GTCGGCGC TGTTCGGCATCGTCG Swit_1934 2166656 - 2168185 + | hypothetical protein Swit_1935 2168243 - 2169625 + | MATE efflux family protein TERM 1015 2169831 - 2169798 - g 74 -11.7 -3.74872 | gap 1, overlap 2169823 ATGGATGGGACGAAA CCGC-GGTCGAGATCG TCG CGATCAAGACCAGCGG CGACCGCATCCAGGA Swit_1936 2169683 - 2170609 + | porphobilinogen deaminase TERM 1016 2170724 - 2170751 + G 74 -13.4 -3.30007 | gap 1 TCCGGATCGAGCCGA TCGCCTG-GGGCG CGC CGCCCGCCGGCGA TTATGACGCGCTGTT Swit_1937 2170606 - 2171295 + | uroporphyrinogen III synthase HEM4 TERM 1017 2171702 - 2171740 + G 84 -19.5 -2.87344 | CTCCTGATCGCCTTC GCCGCGCGGCGCGCGAT CGAGC GTGGCGCGCCGCTCGGC TATCTCGAAGGGGTG Swit_1938 2171327 - 2172193 + | hypothetical protein TERM 1018 2172227 - 2172202 - f 71 -8.9 -3.89354 | overlap 2172203 TCCTTAAATCAAGAA TCTCCCTCCCC TTCA GGGGAGGGATG TAAGGGTGGGGTACG TERM 1019 2172241 - 2172273 + F 90 -13.4 -4.07568 | opp_overlap 2172250 TGTAAGGGTGGGGTA CGCAGTGAAGGGGC TCGAT GCCCCTTCACGGAG TTTTGCGGGACGACC Swit_1939 2172603 - 2173553 + | peptidase M48, Ste24p Swit_1940 2173611 - 2174879 + | Fmu (Sun) domain-containing protein TERM 1020 2174902 - 2174882 - f 71 -12.5 -3.05844 | CCGGCGATCCTAAGA TCCTCCCCG GCA CGGGGAGGG GGACCGGCGCCAGCC TERM 1021 2174928 - 2174942 + F 71 -12.8 -3.01712 | overlap 2174915 CAGCCGGTGGAGGGG CGCCGC ACA GCGGCG TCTTCGCCGCCGCAC TERM 1022 2175256 - 2175203 - g 83 -20.3 -2.73875 | gap 1, overlap 2175200 2175249 TCGTGCCGAACATCA CGATCGGCCCGGCGGTGGTGAAGGCG CTG CGCCCGCA-CACCACCAAGCCGTTCG ACGTCCACCTGATGA Swit_1941 2175061 - 2175723 + | ribulose-5-phosphate 3-epimerase Swit_1942 2175734 - 2177461 + | heparinase II/III family protein Swit_1943 2177544 - 2178071 + | amino acid-binding ACT domain-containing protein Swit_1944 2179482 - 2178193 - | TetR family transcriptional regulator TERM 1023 2179058 - 2179021 - G 82 -13.3 -3.74693 | gap 1 GTGGACCCGATCAAA CCAGGAGCG-CGCCAGCC GGC GGGTGGCGTCGCGCCGGG CGGCGTCGAGCATGA Swit_1945 2179566 - 2180294 + | Crp/FNR family transcriptional regulator Swit_1946 2180386 - 2180880 + | hypothetical protein Swit_1947 2180877 - 2181320 + | hypothetical protein TERM 1024 2181478 - 2181457 - f 73 -6.5 -4.32034 | TCAGCATGACGAAAA TCCATAGGC GATC GCCTGCGGA AACAGGGGGAGAGGT Swit_1948 2181496 - 2183166 + | general substrate transporter Swit_1949 2183844 - 2183170 - | spermidine synthase-like protein Swit_1950 2183938 - 2184636 + | pentapeptide repeat-containing protein Swit_1951 2186093 - 2184651 - | RND efflux system outer membrane lipoprotein Swit_1952 2189206 - 2186096 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein Swit_1953 2190324 - 2189221 - | RND family efflux transporter MFP subunit Swit_1954 2190440 - 2191201 + | two component transcriptional regulator Swit_1955 2191201 - 2192307 + | integral membrane sensor signal transduction histidine kinase Swit_1956 2193310 - 2192288 - | hypothetical protein Swit_1957 2193405 - 2194328 + | LysR family transcriptional regulator Swit_1958 2194408 - 2194785 + | hypothetical protein Swit_1959 2194757 - 2195533 + | RES Swit_1960 2196560 - 2195553 - | amidohydrolase 2 TERM 1025 2196629 - 2196611 - H 75 -11.6 -3.57144 | overlap 2196612 CCGCGCACGTCCAAA GCGCCGGC CCG GGCGGCGC GGCGAGGGGCAGGAA Swit_1961 2196782 - 2199133 + | Pyrrolo-quinoline quinone Swit_1962 2200150 - 2199203 - | LysR family transcriptional regulator Swit_1963 2201067 - 2200147 - | LysR family transcriptional regulator Swit_1964 2202393 - 2201128 - | cytochrome P450 Swit_1965 2202602 - 2202405 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1026 2202629 - 2202641 + r 74 -10.5 -3.76125 | opp_overlap 2202622, overlap 2202616 CCTCGAAAGCGGGCG GGCGG GCG CCGCC TTTCGCTTCCGATCC Swit_1966 2204073 - 2202745 - | amidohydrolase TERM 1027 2204044 - 2204013 - G 86 -22.4 -2.62184 | gap 1, opp_overlap 2204043 CGTCCTCGCACAGGA CGGCCATGCCGCCGC CGC GCGGCG-CATGGCCG TCGAACAGATTGGCG Swit_1967 2204992 - 2204198 - | PhzF family phenazine biosynthesis protein Swit_1968 2205201 - 2206001 + | short chain enoyl-CoA hydratase Swit_1969 2206132 - 2207421 + | amidohydrolase 2 TERM 1028 2207426 - 2207461 + F 75 -13.4 -3.01712 | gap 1, opp_overlap 2207412 2207414 2207415, overlap 2207435 ACACCGCCTGATCGG T-ATCGCGGCGGGAAAG TCC CTTTCCTGCCGCGACCA TCTTCCAGACCACCA Swit_1970 2207494 - 2208786 + | L-carnitine dehydratase/bile acid-inducible protein F Swit_1971 2208798 - 2209961 + | Acetyl-CoA acetyltransferase-like protein Swit_1972 2209958 - 2210410 + | nucleic-acid-binding protein containing a Zn-ribbon-like protein Swit_1973 2210417 - 2211151 + | nitroreductase Swit_1974 2211148 - 2212239 + | L-carnitine dehydratase/bile acid-inducible protein F Swit_1975 2212626 - 2213729 + | AraC family transcriptional regulator TERM 1029 2213755 - 2213776 + T 100 -17.3 -5.96219 | GACGCCGACCATCGA CTGCCGGCG CTCC CGCCGGCAG TTTTTTTTATGCCTG Swit_1976 2215147 - 2213783 - | major facilitator transporter TERM 1030 2214776 - 2214733 - G 70 -9.4 -3.83323 | gap 1, overlap 2214728 2214736 CGGACAGAAGCGAAA GCACGGCCATCGGCACCACCG CCT CGGCGACGGCGA-GGCCGGTC CGGGCCGCGAGCAGC TERM 1031 2214838 - 2214801 - G 70 -9.1 -3.93963 | overlap 2214823 AGCAGCATGTAGAAA TTGTGCGCGACGCCG CACAGGAT CGTCATCGCGCACCA GGCGATCACCGCCAG Swit_1977 2215996 - 2215193 - | enoyl-CoA hydratase Swit_1978 2216484 - 2216014 - | hypothetical protein Swit_1979 2217988 - 2216489 - | aldehyde dehydrogenase Swit_1980 2218222 - 2219304 + | alcohol dehydrogenase Swit_1981 2220061 - 2219321 - | short-chain dehydrogenase/reductase SDR TERM 1032 2220020 - 2219992 - G 78 -16.7 -3.01712 | CTTCGCGGGCGAACA GGCGGGCATGGGA CGC CCCCATGCCCGAC GCCGCGCCCGTGATG Swit_1982 2220232 - 2221413 + | epocide hydrolase domain-containing protein TERM 1033 2221446 - 2221423 - T 74 -13.2 -3.31144 | gap 1, overlap 2221424 GCCTGACGCTCAGAA GGGGGAAGCAC GAT GTGCT-CCCCC TTCGAAACCGTCAGA TERM 1034 2221446 - 2221424 - T 77 -15.6 -2.58544 | overlap 2221423 CCTGACGCTCAGAAG GGGGAAGCAC GAT GTGCTCCCCC TTCGAAACCGTCAGA Swit_1983 2223460 - 2221457 - | NADH:flavin oxidoreductase/NADH oxidase Swit_1984 2223953 - 2223474 - | hypothetical protein TERM 1035 2223911 - 2223897 - G 71 -10 -3.78004 | overlap 2223895 GCAGTAGAAGAAATA GAGGTC GGC GACCTC GCGAATCCGCATGCG TERM 1036 2224096 - 2224077 - R 100 -16.4 -5.40072 | CTTCGGGCAAAAAAA GGGGCGCC CGAA GGCGCCCC ATGACGGAGAGTCCG Swit_1985 2226384 - 2224120 - | TonB-dependent receptor, plug TERM 1037 2225336 - 2225318 - G 77 -11 -3.86897 | TCGATGTCCGAGAAA GCCAGCTC GCG GAACTGGC GATAGCCGGTGACGA TERM 1038 2225411 - 2225455 + g 74 -12.7 -3.61715 | ACGCTGAAATTATGG CTGTCGCGATCCGGCCCGGGC AGC GCCTGGGTGGTGTAGCGACGG TTGTTCGGCAAGGTG Swit_1986 2226671 - 2227507 + | hydroxyacylglutathione hydrolase Swit_1987 2227830 - 2227504 - | Rieske (2Fe-2S) domain-containing protein TERM 1039 2227643 - 2227609 - G 85 -15.9 -3.63627 | gap 1 GTCCGACAGGCGAAA GCGGATGCCGTGCAAC GAGC ATTGCACGGCAT-CGC CCCTGAGCCTGCCCA TERM 1040 2227855 - 2227874 + r 78 -10.6 -4.07568 | opp_overlap 2227855 CCTCGCACAAAAAAA CGGGCGGC TCGC GCCACCCG TTTTCCCGAACCGGC TERM 1041 2227874 - 2227855 - R 100 -12.8 -5.60993 | opp_overlap 2227855 CCTCGCACAAAAAAA CGGGCGGC TCGC GCCACCCG TTTTCCCGAACCGGC Swit_1988 2229310 - 2227898 - | Rieske (2Fe-2S) domain-containing protein Swit_1989 2230852 - 2229455 - | FAD linked oxidase domain-containing protein Swit_1990 2231336 - 2230845 - | lactoylglutathione lyase TERM 1042 2231222 - 2231200 - G 79 -11.2 -4.03234 | overlap 2231208 CCGTCGCGATAGAAA CGCAACGAGG CGT CCACGTCGCG GATGCGGATCATGCT Swit_1991 2232117 - 2231323 - | enoyl-CoA hydratase/isomerase TERM 1043 2231533 - 2231569 + g 70 -12.3 -3.35679 | CTTGTCCGCATAGGC GGCGACGGCCGG-AGCC AGCTC GGCTTCCGGCAG-CGCC TTGTGGATCAGCCCG Swit_1992 2233240 - 2232140 - | acyl-CoA dehydrogenase domain-containing protein TERM 1044 2232732 - 2232721 - G 76 -7.2 -4.3129 | opp_overlap 2232720, overlap 2232722 2232723 CATCCACCAGGAAAA GGGC GGGC GCCC CTTCCTCCCCGGTTC Swit_1993 2234473 - 2233286 - | acyl-CoA dehydrogenase domain-containing protein Swit_1994 2235291 - 2234476 - | hypothetical protein TERM 1045 2234609 - 2234599 - G 78 -8.2 -4.2558 | overlap 2234600 GACCCGCGAGGAAAA GGGC GCC GCCC GATCGTCGGGCCGAT TERM 1046 2236213 - 2236185 - g 77 -14.5 -3.18264 | CGGGCGACGCAGGAA GGCCCCTCGCCGG AGA CCGGCGACGAACC GCTGACCTTCGACGA Swit_1995 2235465 - 2236802 + | cytochrome P450 Swit_1996 2237517 - 2236780 - | hypothetical protein Swit_1997 2238350 - 2237514 - | regulatory protein, LuxR TERM 1047 2238160 - 2238196 + g 72 -14.3 -3.24924 | overlap 2238158 GTGGTGGCCAGCACC TCGCCCTCCTCGTCCCG CAT CGGGACGCGCGCGGCGA TATTGTCGGTGGCCG TERM 1048 2239124 - 2239140 + G 72 -3.5 -4.63218 | opp_overlap 2239122 GATCGGGCAGGAAGG GCGCGAC ACG GCCGAGC TTTTCTTCAGCGACA Swit_1998 2238480 - 2239652 + | acyl-CoA dehydrogenase domain-containing protein Swit_1999 2239649 - 2240461 + | enoyl-CoA hydratase/isomerase Swit_2000 2240491 - 2241672 + | acetyl-CoA acetyltransferase Swit_2001 2241687 - 2242451 + | short-chain dehydrogenase/reductase SDR TERM 1049 2242548 - 2242582 + G 80 -16.5 -3.16881 | gap 1, opp_overlap 2242546 2242544 2242573 TCCTCTACGAATATT CCGGGCCG-CTGTTCG ACAG CGAACAGTCCGCCCGG TTCGTGGCATCGGTG Swit_2002 2242523 - 2243545 + | AraC family transcriptional regulator Swit_2003 2244272 - 2243514 - | short-chain dehydrogenase/reductase SDR Swit_2004 2245213 - 2244269 - | alcohol dehydrogenase TERM 1050 2244985 - 2245007 + g 89 -18.4 -3.35679 | GGGCGCCTGCCGCCG GCCCGCTGCC GTC GGCGGCGGGC TTCTCGATCACCCCG Swit_2006 2245922 - 2246725 + | PhzF family phenazine biosynthesis protein Swit_2007 2246709 - 2247827 + | NADH:flavin oxidoreductase/NADH oxidase Swit_2008 2247831 - 2248331 + | hypothetical protein Swit_2009 2248328 - 2248705 + | ethyl tert-butyl ether degradation EthD Swit_2010 2249709 - 2248702 - | alpha/beta hydrolase domain-containing protein Swit_2011 2251266 - 2249926 - | major facilitator transporter Swit_2012 2253218 - 2251263 - | FAD dependent oxidoreductase TERM 1051 2251913 - 2251932 + g 95 -15 -4.10657 | GGACCTTGGCGAGCA GGTCGGGC CGGT GCCCGACC TTTTCCCGGATATAG TERM 1052 2255056 - 2255039 - g 76 -2.6 -4.72272 | opp_overlap 2255019, overlap 2255041 CGGCTCCACCAAAAA GCCGAC GGCTAT GTCGCC ACGATCGTTTCCGGC Swit_2013 2253443 - 2255143 + | dihydroorotase TERM 1053 2255200 - 2255231 + G 80 -15.8 -3.24456 | ATCATCCGATCGGCA CCCCGGCATCGCGC TGGG GCGCGGTGCTGGCG TTCATGCTGGTCTAT Swit_2014 2255145 - 2256524 + | major facilitator transporter Swit_2015 2256533 - 2256943 + | hypothetical protein Swit_2016 2256940 - 2258106 + | lipid-transfer protein Swit_2017 2258956 - 2258114 - | protein tyrosine/serine phosphatase Swit_2018 2259115 - 2260311 + | hypothetical protein TERM 1054 2260352 - 2260314 - T 93 -20.9 -3.09505 | AGAGGTGATGTAAGA GGCGCGGCGCCGGCCGG GCCTT CCGGTCGGCGCCGCAGC AGACGAAGTCTCCGG Swit_2019 2261247 - 2260372 - | short-chain dehydrogenase/reductase SDR Swit_2020 2262581 - 2261244 - | cytochrome P450 TERM 1055 2262477 - 2262435 - G 72 -14.7 -2.94099 | CCGCGTCACCAGATA CCAGGGCTTGTCGCCGACC TGGTG GACCGGCGCCTCGCCCTGG AGCTCGGCCAGCTTG Swit_2021 2263483 - 2262584 - | enoyl-CoA hydratase TERM 1056 2262673 - 2262683 + g 72 -8.2 -4.07568 | opp_overlap 2262672 2262673 CGCGGCCCTCGAAAC GCGC CGG GCGC TTTTCCAGGAAGGCG Swit_2022 2266914 - 2263480 - | indolepyruvate ferredoxin oxidoreductase TERM 1057 2264026 - 2263974 - G 74 -15.3 -3.04792 | GCATCAGCTTGAACA GGTTGAGCGCGACGGCCCGCGCGAC ATC GCCGCGCGGATCGCCGGCCGCGACC CGGCGCACGAACCGC TERM 1058 2264565 - 2264518 - G 73 -12.6 -3.51232 | gap 1, overlap 2264514 GCCGGGCGAAAGCAA CTGGACGACTTCGGGCGCGGTCG CGG CGATCGCGTC-GCAGCCGACCAG CAGGTCGAGCTGCTC TERM 1059 2268777 - 2268809 + G 72 -14.7 -2.87344 | opp_overlap 2268757 2268758 GCGGACCTGCCGGCC GGCGGGCGGCGGCTG CAC CAGCCGGCGACCGGC TATGTCGCCACCATC Swit_2023 2267193 - 2268932 + | amidohydrolase 3 Swit_2024 2271271 - 2268917 - | quinoprotein glucose dehydrogenase Swit_2025 2271477 - 2273141 + | protein of unknown function DUF894, DitE Swit_2026 2273148 - 2273804 + | isochorismatase hydrolase Swit_2027 2274137 - 2273793 - | hypothetical protein Swit_2028 2274993 - 2274238 - | short-chain dehydrogenase/reductase SDR Swit_2029 2275496 - 2274990 - | hypothetical protein Swit_2030 2276253 - 2275486 - | hypothetical protein TERM 1060 2276529 - 2276553 + H 95 -12.7 -4.25283 | ACGGGTTCCGCACTG GCCGGGCCCGC GAC GCCGGCCGGGC TTTTCCTGACGGGAT Swit_2031 2276593 - 2277621 + | 2-nitropropane dioxygenase, NPD Swit_2032 2277651 - 2278424 + | short chain enoyl-CoA hydratase Swit_2033 2278906 - 2281362 + | TonB-dependent receptor TERM 1061 2281363 - 2281401 + F 83 -17.4 -2.62263 | overlap 2281367 GGTTGGCGGTTATGA TCGCGGGCCGCGCCCTTC CCT GAAGGGCGCTGTCCATGA TGGTATCGGAGGGAT Swit_2034 2281421 - 2282623 + | Rieske (2Fe-2S) domain-containing protein TERM 1062 2283267 - 2283289 + G 74 -14.8 -3.07522 | opp_overlap 2283264 2283255 GAAGGTCAAGGAGGT CGTCGGCCGC GTG GCGCCCGACG TCTATTGCACCCTGT Swit_2035 2282689 - 2284794 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_2036 2284808 - 2286610 + | hydantoinase B/oxoprolinase Swit_2037 2286607 - 2286891 + | hypothetical protein Swit_2038 2286901 - 2287575 + | isochorismatase hydrolase TERM 1063 2287612 - 2287646 + T 100 -23 -2.90723 | GCCGCGCGGATTCGA CCAGGCTGCGATGGGT CGG GCTCATCGCAGCCTGG TGTCATTGCCGGTGC Swit_2039 2288629 - 2287649 - | AraC family transcriptional regulator TERM 1064 2287682 - 2287705 + g 95 -9.5 -4.82901 | opp_overlap 2287680 2287681 CAGGTTCGTCAAACG CCGCCGACG CAGGGT CGTCGACGG TTTTTCTCCGAAGCG Swit_2040 2289136 - 2288720 - | hypothetical protein TERM 1065 2289290 - 2289269 - H 77 -4.4 -4.88736 | overlap 2289270 GATGACCGAGAAAAA CTGCTCCG CCCGGC CGGAACAA GGGGGTGGAGGGGAA TERM 1066 2289477 - 2289510 + G 74 -11 -3.72576 | gap 1, overlap 2289478 AGGAGCGGTTGCAGG AC-GTGCCGATCGCG ATCTC CGCGATCGGCGCCGA TTTCCTGCGGAGCCG TERM 1067 2289478 - 2289509 + G 72 -14.5 -2.83403 | gap 1, overlap 2289477 GGAGCGGTTGCAGGA C-GTGCCGATCGCG ATCTC CGCGATCGGCGCCG ATTTCCTGCGGAGCC TERM 1068 2291033 - 2291013 - g 79 -11.1 -4.07687 | AGGTGGGGCTGAAAA GCCGGCTGC TCG ACAACCGGC TCCAGCTCAACATCG Swit_2041 2289308 - 2291662 + | TonB-dependent receptor Swit_2042 2291771 - 2292838 + | AraC family transcriptional regulator Swit_2043 2292912 - 2293505 + | hypothetical protein Swit_2044 2293528 - 2295216 + | glucose-methanol-choline oxidoreductase Swit_2045 2295292 - 2297655 + | TonB-dependent receptor Swit_2046 2297687 - 2298595 + | NAD-dependent epimerase/dehydratase Swit_2047 2299644 - 2298592 - | AraC family transcriptional regulator Swit_2048 2299730 - 2300479 + | TetR family transcriptional regulator Swit_2049 2300677 - 2301603 + | hypothetical protein Swit_2050 2301600 - 2302952 + | aminoglycoside phosphotransferase TERM 1069 2302988 - 2302965 - T 100 -17.4 -4.70319 | TGAGGAAAAGGAAAA GGGCCGCCCC GCGA GGAGCGGCCC CAAGATCATGTTTAC Swit_2051 2303656 - 2303051 - | hypothetical protein TERM 1070 2303651 - 2303629 - G 82 -13.4 -3.76224 | CCTGGAGTGAGGAAA GCCTGTCCGT CAG ACGGCCAGGC CCCAATGGCCGATTC Swit_2052 2304156 - 2303638 - | hypothetical protein TERM 1071 2304308 - 2304324 + H 72 -4.4 -4.59773 | opp_overlap 2304316 CGCGCGGGAGCGGTT GCGTGA AACCG TCATGC TTTTTGCCCATGGCG Swit_2053 2304310 - 2305506 + | Rieske (2Fe-2S) domain-containing protein Swit_2054 2305496 - 2306014 + | hypothetical protein TERM 1072 2307056 - 2307101 + G 95 -21.1 -3.28712 | gap 1, opp_overlap 2307039 GACCGTGCTCGAGGC GCTCGACCGCGTCCTCGCCCGC GTC GCCGGCGAGG-CGCTGTCGCGC TTCTACGAGGCCGAG Swit_2055 2306529 - 2307761 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1073 2307827 - 2307811 - f 76 -5.7 -4.58395 | TCCACGTTGGAAAAA CCTGCCA TGC CGGCTGG CGACGAGGATGGGAC Swit_2056 2307844 - 2308251 + | hypothetical protein Swit_2057 2308519 - 2308271 - | hypothetical protein TERM 1074 2308561 - 2308583 + r 77 -12.7 -3.54424 | gap 1 GATCGACCTAGGGGC GCCGC-CGCC CCAT GGCGCGCGGC TTTCGACCGATCGGC Swit_2058 2309787 - 2308675 - | regulatory protein, LuxR Swit_2059 2310043 - 2311752 + | amidohydrolase 3 Swit_2060 2311822 - 2314167 + | TonB-dependent receptor TERM 1075 2314189 - 2314218 + T 100 -26.5 -4.65722 | GATGCAGTGGGATGA GGCCGCGGCGGGA ACCG TCCCGCCGCGGCC TTTCTTTATATCTCG Swit_2061 2316158 - 2314224 - | K+ potassium transporter TERM 1076 2315205 - 2315166 - G 95 -20.8 -3.35679 | gap 1 CTGGGTGACGGAGAA GGCGCCGGTGATCACC-GC CTG GCTGGCGATCACCGTCGCC ATCGTCGCGAGGATG Swit_2062 2316835 - 2316317 - | AsnC family transcriptional regulator Swit_2063 2316893 - 2317990 + | alanine dehydrogenase Swit_2064 2319026 - 2318133 - | methenyltetrahydrofolate cyclohydrolase TERM 1077 2318882 - 2318938 + g 73 -16 -2.56596 | gap 5, overlap 2318892 TGCCGACCAGCACCA CCGCCAGCC-CCG-GCGGCGCC-CCGTCG CGCG CGACGATGGCG-CGCACGGCGGC-GGCGG TCCGTTCGTCGAGCG TERM 1078 2318892 - 2318942 + g 77 -15.3 -3.14132 | overlap 2318882 CACCACCGCCAGCCC CGGCGGCGCC-CCGTCGCGCGCGAC GAT GGCGCGCACGGCGGCGGCGGT-CCG TTCGTCGAGCGAGCG Swit_2065 2320473 - 2319055 - | aldehyde dehydrogenase Swit_2066 2322629 - 2320545 - | acyl-CoA dehydrogenase domain-containing protein TERM 1079 2321664 - 2321647 - G 75 -9.1 -4.15044 | gap 1 TCGGCGTCGAAGAAA CGCC-GCG CCT CGCTGGCG AAGCGCTCGGCCGCC TERM 1080 2322452 - 2322399 - G 80 -16.8 -3.15544 | gap 2, overlap 2322425 2322438 2322442 GCGCATCGCGACGAA GCCGGCCGCGACCGCCT-T-GGCCCA AAGC TCGGCCGAGAAGCCATCGCGGCCGGC CGCGCGCACCACGTC Swit_2067 2322656 - 2323492 + | enoyl-CoA hydratase TERM 1081 2323606 - 2323659 + G 82 -15.8 -3.28791 | gap 1 GCCGCGCTCGACGAT GCCGCG-CTCGACCCGGCCGTCCGC TGCCT GCTGCTGGCCGGCGCGGGGCGCGGC TTCTGCGCGGGCCAT Swit_2068 2323492 - 2324271 + | enoyl-CoA hydratase TERM 1082 2324332 - 2324299 - f 76 -9.5 -4.07568 | gap 1, opp_overlap 2324326 CGCGCCTTCGGAAAA GCCGCCGCACGGCTTG CCG CAAGC-GCCCGCCGGC CGCCAGCATGGCCGC Swit_2069 2324372 - 2325559 + | amidohydrolase 2 Swit_2070 2325564 - 2327024 + | AMP-dependent synthetase and ligase Swit_2071 2327974 - 2327180 - | Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit-like protein Swit_2072 2328861 - 2327977 - | coenzyme A transferase Swit_2073 2329034 - 2330179 + | regulatory protein, LuxR TERM 1083 2330843 - 2330898 + G 72 -15.2 -2.87132 | opp_overlap 2330807 CGGCGAGCGCGGCAT CGGCGCGCTGGTGCTCGCCTTCAGCG GCCC TGCCGAGGTCGCGCGCAAGAGCGCCG TCTATCGCGAGGCCC Swit_2074 2330265 - 2331398 + | luciferase family protein TERM 1084 2331688 - 2331633 - g 82 -15.3 -3.53012 | gap 1, overlap 2331634 GGCCGCCTTGGCAAA CGGCGCCTCGGCGCAGACCGTCC-CC GATCA GGCGGACGATCAGCGCCAGGGCCTCG AGGAAATCGTCGTGA TERM 1085 2331685 - 2331634 - g 74 -16 -2.71712 | gap 3, overlap 2331633 GCCGCCTTGGCAAAC GGCGCCTCGGCGCAGACCGTCC-CC GATCA GGCGGACGATCAGCGCC-AGG-GCC TCGAGGAAATCGTCG Swit_2075 2331574 - 2333853 + | TonB-dependent receptor, plug TERM 1086 2333965 - 2333917 - f 79 -13.8 -3.41126 | gap 2, overlap 2333918 2333945 CGACAAAGCTGAGAA CGGGGGACGGGAACCGGCCGGGCC AAC AGCC-GGCCGGTTCCCGGAACC-G ATGGGAAGGGCGCCC TERM 1087 2333965 - 2333918 - f 71 -14 -2.64194 | gap 1, overlap 2333917 2333945 GACAAAGCTGAGAAC GGGGGACGGGAACCGGCCGGGCC AAC AGCC-GGCCGGTTCCCGGAACCG ATGGGAAGGGCGCCC TERM 1088 2333973 - 2333993 + F 100 -11.1 -4.87665 | CGGAACCGATGGGAA GGGCGCC CTTATCC GGCGCCC TTTTTGTGAATAAGG Swit_2076 2334020 - 2335117 + | dihydrodipicolinate reductase Swit_2077 2335114 - 2336133 + | amidohydrolase 2 Swit_2078 2336983 - 2336138 - | short-chain dehydrogenase/reductase SDR TERM 1089 2336831 - 2336867 + g 74 -14.4 -3.28712 | gap 1, overlap 2336834 CGGCCCATGCGGTTC GAGCG-CCTCGGCGGCG CTGG CGCAGCCGAGGTCGGTC TTGTCGACCGCGAGC Swit_2079 2338251 - 2336980 - | major facilitator transporter TERM 1090 2338286 - 2338337 + r 100 -37.6 -2.91582 | opp_overlap 2338332 TGTCCCGGCCCCGCT CCCCCCTCTCCTCGTCATTCCCGC GAAA GCGGGAATGACGAGGAGAGGGGGA TGTCTCGATCACATC Swit_2080 2339058 - 2338351 - | carboxymethylenebutenolidase Swit_2081 2339642 - 2339073 - | hypothetical protein Swit_2082 2340397 - 2339639 - | short-chain dehydrogenase/reductase SDR Swit_2083 2342526 - 2340388 - | 5-oxoprolinase (ATP-hydrolyzing) Swit_2084 2344282 - 2342519 - | 5-oxoprolinase (ATP-hydrolyzing) Swit_2085 2344766 - 2344284 - | hypothetical protein Swit_2086 2345671 - 2344790 - | taurine dioxygenase Swit_2087 2347448 - 2345715 - | amidohydrolase 3 TERM 1091 2347560 - 2347595 + r 77 -13.3 -3.63627 | opp_overlap 2347560 TATCGACGAGAAGAA TGATGGCGTGCCGTC CCGCAT GACGACGCGCCGTCA TTTAACATATGAAAA TERM 1092 2347595 - 2347560 - R 79 -11.1 -3.8512 | opp_overlap 2347560 TATCGACGAGAAGAA TGATGGCGTGCCGTC CCGCAT GACGACGCGCCGTCA TTTAACATATGAAAA Swit_2088 2349354 - 2347858 - | aldehyde dehydrogenase (acceptor) Swit_2089 2350491 - 2349373 - | alcohol dehydrogenase TERM 1093 2350608 - 2350637 + H 81 -3.7 -5.00616 | gap 1, opp_overlap 2350609 2350610, overlap 2350609 2350610 TCAACAGCCGAAGGA ATGCC-GATAATAT CGG ATATTATCCGGCGG TTTTTTCCAGGGACA TERM 1094 2351139 - 2351114 - g 73 -12.6 -3.53012 | gap 1, opp_overlap 2351099 2351114 GCCTGCTGCTCGAAA GCGCGACCGCG CTGTT CGCG-TCGCGC TTCGGCCTGGGCTTC TERM 1095 2351781 - 2351824 + G 73 -16.6 -2.62184 | gap 1 TCTGCTCAACGTCCT GCTCGACCGCACCGCCGC-CG AGA CGCGCGGCCGGGCGATCGGGC TGGTCTCGCCGGCGA Swit_2090 2350768 - 2352000 + | major facilitator transporter TERM 1096 2352142 - 2352099 - g 70 -15.2 -2.70932 | gap 1, opp_overlap 2352124 CGTCGCGGTGAAGGA CGGCCGCATCGCC-GCGATCG GCG CGGTCGCGGGCGACGCCGCCC GCACCATCGACGCGA Swit_2091 2352013 - 2353695 + | amidohydrolase 3 Swit_2092 2353707 - 2354648 + | taurine catabolism dioxygenase TauD/TfdA Swit_2093 2354824 - 2355531 + | hypothetical protein Swit_2094 2355548 - 2356519 + | alpha/beta hydrolase fold Swit_2095 2357530 - 2356472 - | hypothetical protein Swit_2096 2358398 - 2357625 - | short-chain dehydrogenase/reductase SDR Swit_2097 2359204 - 2358395 - | hypothetical protein TERM 1097 2358503 - 2358460 - G 70 -15.3 -2.73875 | gap 3, overlap 2358443 2358444 2358457 GCCCGGCGAAGACGA GCGCGCCG-CG-CCCCGACGCC TGG AGCG-CGGCGTCGACGGCGCGC GGCACCGCGTCCCAG TERM 1098 2359144 - 2359110 - G 83 -15.6 -3.54741 | opp_overlap 2359131 TACCAGCGGTGGAAA TGGCGCTCCCAGCCCG GAT CGGGCTGGGCGAGCGA GAAGAGCATGCCGCC Swit_2098 2360130 - 2359201 - | luciferase family protein Swit_2099 2361304 - 2360150 - | beta-lactamase TERM 1099 2361280 - 2361242 - G 77 -11.5 -3.89501 | GAACAGCCCGAGAAA GGCGTCGGCGACCCGGC GGAAG GCCGGGTCCCAGCGGCC CTCGATGCGCTCGCG Swit_2100 2362851 - 2361301 - | AMP-dependent synthetase and ligase Swit_2101 2363267 - 2362848 - | hypothetical protein Swit_2102 2364198 - 2363269 - | cyclase family protein Swit_2103 2365363 - 2364209 - | Acetyl-CoA acetyltransferase-like protein Swit_2104 2366622 - 2365561 - | luciferase family protein Swit_2105 2368261 - 2366624 - | AMP-dependent synthetase and ligase TERM 1100 2366857 - 2366819 - G 72 -13.8 -3.21218 | gap 1 ATGCGGGATGACGAA GGCGACGCCGACC-TCG CCCAGC CGCCGGTCGGCGACGCC CACCACCGACACCGC Swit_2106 2368965 - 2368264 - | short-chain dehydrogenase/reductase SDR Swit_2107 2370041 - 2368962 - | hypothetical protein Swit_2108 2371185 - 2370043 - | luciferase family protein TERM 1101 2371245 - 2371230 - H 74 -4.6 -4.62669 | opp_overlap 2371230 TAATCAAACAACAAA CCTAGC GATC GCTTGG TTATGATTTCCGACT Swit_2109 2371575 - 2372195 + | TetR family transcriptional regulator Swit_2110 2372967 - 2372182 - | transcriptional regulator IclR-like protein Swit_2111 2372983 - 2373825 + | 4-oxalocrotonate decarboxylase Swit_2112 2373828 - 2374772 + | acetaldehyde dehydrogenase Swit_2113 2374769 - 2375806 + | 4-hydroxy-2-ketovalerate aldolase Swit_2114 2376293 - 2375814 - | hypothetical protein Swit_2115 2377554 - 2376274 - | amidohydrolase TERM 1102 2378062 - 2378113 + G 82 -14.3 -3.72695 | TGACCGGCGCGGCCC CCGCGCAGCGC-CGGCTCGAACGCG CGGT CGCGG-CGGGCTATGCGCGGCGCGG TTTCCTGCGCGGCAT Swit_2116 2377623 - 2378165 + | hypothetical protein Swit_2117 2378232 - 2378417 + | hypothetical protein Swit_2118 2381572 - 2378486 - | TPR repeat-containing protein Swit_2119 2383392 - 2381569 - | peptidase M48, Ste24p TERM 1103 2383269 - 2383312 + g 86 -14.4 -3.9461 | gap 1, opp_overlap 2383240, overlap 2383272 GCGAGGCCACCACCG GCTCGGCCGGCGCGGCCGCGA CCT TGGCGGGCGCGGCGG-CGCGC TTCTTCTTGGGGGCG TERM 1104 2383272 - 2383311 + g 72 -15.6 -2.96444 | gap 1, opp_overlap 2383240, overlap 2383269 AGGCCACCACCGGCT CG-GCCGGCGCGGCCGCGA CCT TGGCGGGCGCGGCGGCGCG CTTCTTCTTGGGGGC Swit_2120 2383824 - 2383432 - | hypothetical protein Swit_2121 2384156 - 2385052 + | TonB-dependent receptor Swit_2122 2385401 - 2385072 - | small multidrug resistance protein TERM 1105 2385543 - 2385585 + G 70 -12.7 -3.25719 | gap 1 CCGCTCGATGGGCTG GACGCGCGCGGCGATGATCG GCTT CGA-CATCGGCGCGGTCGTC TTCCTGCTGTCCTGC Swit_2123 2385436 - 2386080 + | hypothetical protein Swit_2124 2386731 - 2386252 - | GCN5-related N-acetyltransferase TERM 1106 2386455 - 2386428 - G 82 -17 -3.02144 | gap 1 CCAGCGCCTGGAACA GCGCGCGGGCGAC GCC GCCGC-CGCGCGC GTCGGGATCGACGAA Swit_2125 2387615 - 2386728 - | hypothetical protein ispG 2388918 - 2387659 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Swit_2127 2388965 - 2389921 + | peptidase T2, asparaginase 2 TERM 1107 2390739 - 2390711 - g 78 -17.3 -2.78816 | TGATGCGCCATCAGA TCGCGCGCGGCGG CCT CCGCCTCGCGCGG CTGCTCGACGAGGCG Swit_2128 2389921 - 2390763 + | hypothetical protein Swit_2129 2390871 - 2391323 + | hypothetical protein Swit_2130 2391673 - 2391476 - | hypothetical protein Swit_2131 2392583 - 2391681 - | band 7 protein TERM 1108 2392653 - 2392704 + r 93 -21 -3.04263 | gap 1, opp_overlap 2392660 2392661 2392666, overlap 2392661 GCAATGCTTGTGCGC GCGACAAGGAAAAGGGCCGCCGGCA TCG TGCCGACGGCCCTTT-CCTTTTGGC TGTTCCGCGTGGCGT TERM 1109 2392697 - 2392660 - R 100 -22.9 -3.28712 | gap 1, opp_overlap 2392653 2392661, overlap 2392661 2392666 TTGTGCGCGCGACAA GGAAAAGGGCCGCCGGCA TCG TGCCGACGGCCCTTT-CC TTTTGGCTGTTCCGC TERM 1110 2392661 - 2392697 + r 100 -20.9 -4.28254 | opp_overlap 2392660 2392661 2392666, overlap 2392653 TGTGCGCGCGACAAG GAAAAGGGCCGCCGGCA TCG TGCCGACGGCCCTTTCC TTTTGGCTGTTCCGC TERM 1111 2392697 - 2392661 - R 100 -25.3 -2.57132 | opp_overlap 2392653 2392661, overlap 2392660 2392666 TGTGCGCGCGACAAG GAAAAGGGCCGCCGGCA TCG TGCCGACGGCCCTTTCC TTTTGGCTGTTCCGC TERM 1112 2392692 - 2392666 - R 100 -21.6 -4.48987 | opp_overlap 2392661 2392653, overlap 2392660 2392661 GCGCGACAAGGAAAA GGGCCGCCGGCA TCG TGCCGACGGCCC TTTCCTTTTGGCTGT Swit_2132 2393248 - 2392721 - | peptidoglycan-associated lipoprotein TERM 1113 2393130 - 2393171 + g 91 -15.7 -3.9461 | GCTTCCGGCGCGGGG GCCGGGGCGGTGGTCGCCG GCGG CGGCGGCAGCTCCTCCGGC TTCTTCTTCGCACAA TERM 1114 2393203 - 2393187 - G 70 -12.3 -3.28712 | TTCTTCTTCGCACAA GCGCTGA TGC TCAGCGC CAGCGCCGAGACCAG tolB 2394634 - 2393315 - | translocation protein TolB Swit_2134 2395514 - 2394702 - | hypothetical protein Swit_2135 2396017 - 2395514 - | biopolymer transport, TolR Swit_2136 2396715 - 2396017 - | Tol-Pal system, TolQ Swit_2137 2397163 - 2396720 - | thioesterase superfamily protein TERM 1115 2397201 - 2397215 + r 77 -4.2 -4.84642 | opp_overlap 2397201 GAGAGCCGAAATGAA TCCCCT TTG ACGGGA TTTTCTTCATTTCGA ruvB 2398340 - 2397312 - | Holliday junction DNA helicase B Swit_2139 2400371 - 2398407 - | TPR repeat-containing protein TERM 1116 2399552 - 2399512 - G 75 -9.7 -4.06419 | gap 2, overlap 2399498 TCGGCCGAGAAATAA CCGATCCGCAGCCGCTCGC CCGGC GCGACCGGCCGCG--CCGG CACGGTCTCCACTCC Swit_2140 2401024 - 2400425 - | Holliday junction DNA helicase RuvA TERM 1117 2401006 - 2400950 - G 74 -15.1 -2.98719 | gap 1, overlap 2400943 2400946 GCACCAGACGAGATA GCCGACCCCGCCGACATCGAGCACCG CATGGT CAGCGCTCG-TCTCGGCGAGGACGCC GCGCAGCCGCGCGAT Swit_2141 2401518 - 2401021 - | crossover junction endodeoxyribonuclease RuvC TERM 1118 2401624 - 2401587 - R 95 -12.8 -4.27316 | gap 2, overlap 2401588 TTTGTGAAGTGAAAA GCGG-CGATGCC-GGCGA TCGC TCGCCAGGCATCGACCGG GGCCCCGCCCCCTGG TERM 1119 2401623 - 2401588 - R 86 -16.3 -3.16068 | gap 2, overlap 2401587 TTGTGAAGTGAAAAG CGG-CGATGCC-GGCGA TCGC TCGCCAGGCATCGACCG GGGCCCCGCCCCCTG Swit_2142 2402387 - 2401644 - | hypothetical protein TERM 1120 2402318 - 2402328 + g 70 -8.2 -3.84406 | opp_overlap 2402318 2402316 TGAGCTTGGAGAACA GCGC CGA GCGC TTCTTGTCCTGCGCA Swit_2143 2403847 - 2402558 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1121 2403453 - 2403473 + g 83 -12.5 -4.08216 | opp_overlap 2403437, overlap 2403454 GGGCTGGGGGTGGGT TCCGTCGGC GCA GCCGACGGC TTTTCCCCGGCCTCG TERM 1122 2403454 - 2403472 + g 78 -16 -3.04715 | opp_overlap 2403437, overlap 2403453 GGCTGGGGGTGGGTT CCGTCGGC GCA GCCGACGG CTTTTCCCCGGCCTC Swit_2144 2404879 - 2403854 - | branched-chain alpha-keto acid dehydrogenase E1 component Swit_2145 2406266 - 2405007 - | branched-chain alpha-keto acid dehydrogenase E1 component Swit_2146 2407966 - 2406536 - | integral membrane sensor signal transduction histidine kinase TERM 1123 2407526 - 2407474 - G 74 -13.4 -3.38812 | opp_overlap 2407472, overlap 2407472 CCGTGTCGAAGAACA GCGGCTC-GCCGCGGCGGACGATCAC CCG GCGGTCGTC-GCGGCGGCCGAACGGC ATGTTACTGCGCTGG Swit_2147 2408670 - 2407963 - | two component transcriptional regulator Swit_2148 2409377 - 2408667 - | hypothetical protein TERM 1124 2409347 - 2409305 - G 82 -19.1 -2.87132 | gap 1, opp_overlap 2409313, overlap 2409281 2409278 2409276 CCGGTTCGGGACAGA CCGGCGGCGGCCCGTCGCGG CGCG CGGCGACGGGC-GACGCCAG CAGCAGGGCGAGGAG Swit_2149 2410582 - 2409374 - | hypothetical protein Swit_2150 2411444 - 2410716 - | ABC transporter related Swit_2151 2412849 - 2411434 - | RND family efflux transporter MFP subunit TERM 1125 2412344 - 2412300 - G 100 -24.9 -3.53012 | overlap 2412301 CCTTCGCCGTCGAAA CGCCCGCCGTCGCGCGGGCCG CAT CGCCCCGCGCGACGTCGAGCT CGGTCGCCGACGGCA TERM 1126 2412343 - 2412301 - G 95 -28.4 -2.71712 | overlap 2412300 CTTCGCCGTCGAAAC GCCCGCCGTCGCGCGGGCCG CAT CGCCCCGCGCGACGTCGAGC TCGGTCGCCGACGGC Swit_2152 2414360 - 2412849 - | RND efflux system outer membrane lipoprotein Swit_2153 2414594 - 2415571 + | hypothetical protein Swit_2154 2415647 - 2416198 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1127 2416258 - 2416287 + G 75 -16.3 -2.87344 | CTCGCGCTCGCCCCG GCCGGCGCGCGGG CGGC CCCGCTCGACGGC TATGTCCGCCGGCTC TERM 1128 2416827 - 2416866 + G 81 -2 -4.96848 | overlap 2416797 2416796 CGAGGTCGCTGAGAC CTATGGCGCGCCGCTG CTCGATTT CATGGGCGCCCGATAG TTTTTCTGTCGCGGC Swit_2155 2416201 - 2416866 + | hypothetical protein Swit_2156 2417203 - 2418237 + | luciferase family protein TERM 1129 2418290 - 2418340 + T 81 -15.4 -3.08464 | opp_overlap 2418294 2418301 TGAGGAGCCATTGAG CGAAGGCGAAAGGGCGTCTCGAAG GTC CTTCGAGACGGGCCTTCACCTGCG TTCGGTCCCTCCTCG TERM 1130 2418336 - 2418294 - T 90 -17.8 -3.08133 | opp_overlap 2418290, overlap 2418301 GAGCCATTGAGCGAA GGCGAAAGGGCGTCTCGAAG GTC CTTCGAGACGGGCCTTCACC TGCGTTCGGTCCCTC TERM 1131 2418329 - 2418301 - T 75 -11.7 -3.6715 | opp_overlap 2418290, overlap 2418294 TGAGCGAAGGCGAAA GGGCGTCTCGAAG GTC CTTCGAGACGGGC CTTCACCTGCGTTCG Swit_2157 2419185 - 2418388 - | hypothetical protein TERM 1132 2418881 - 2418861 - G 73 -16.9 -2.63631 | overlap 2418850 TGAACTGCCACAGGA TCGGGCCGA GCT TCGGCCCGA GCTCGGCGATCCCCT Swit_2158 2419535 - 2419185 - | glutathione-dependent formaldehyde-activating, GFA Swit_2159 2419902 - 2419549 - | hypothetical protein Swit_2160 2420874 - 2419978 - | LysR family transcriptional regulator Swit_2161 2420968 - 2422113 + | isovaleryl-CoA dehydrogenase TERM 1133 2422255 - 2422278 + F 72 -12.4 -3.32844 | overlap 2422256 CGCCACCCACCCCTT CCCCCTCCCT TGAA AGGGAGGGGC TTATCCGATGACCCG TERM 1134 2422256 - 2422277 + F 77 -15.9 -2.59564 | overlap 2422255 GCCACCCACCCCTTC CCCCTCCCT TGAA AGGGAGGGG CTTATCCGATGACCC TERM 1135 2423833 - 2423875 + G 78 -14.3 -3.63627 | gap 2 CCTTGCCCTCGCCGC CACGCTGAAC-GC-CCCGATC CCC GATCGCGCGCAGTTCGGCGTG TTTCGGATGTGACGG Swit_2162 2422286 - 2423887 + | propionyl-CoA carboxylase TERM 1136 2424024 - 2424042 + F 83 -13.2 -3.85698 | GACATGGATGCCAGC CTTCAGCC CGT GGCTGAAG TTTATCCCGAGCGCC Swit_2163 2424108 - 2425979 + | carbamoyl-phosphate synthase L chain, ATP-binding Swit_2164 2426697 - 2425999 - | methyltransferase type 12 Swit_2165 2427148 - 2426690 - | BadM/Rrf2 family transcriptional regulator Swit_2166 2428092 - 2427280 - | hypothetical protein Swit_2167 2428428 - 2429294 + | hypothetical protein Swit_2168 2430404 - 2429592 - | IS4 family transposase Swit_2169 2430935 - 2431207 + | hypothetical protein TERM 1137 2431576 - 2431518 - T 86 -5.3 -5.10461 | gap 5, opp_overlap 2431531, overlap 2431519 2431520 2431528 2431529 CGGATTGAAGAAAAA GGGGCAGCAACGCC--GCCATGCGGTCGGC CTGC GCCG-CCGCA-GCCTTGGCGCCGC-GCTCC GCATTGGCGATTTGC Swit_2170 2432120 - 2431746 - | hypothetical protein Swit_2171 2432757 - 2432203 - | peptidase M15A Swit_2172 2433212 - 2432772 - | hypothetical protein TERM 1138 2433251 - 2433237 - R 100 -8.5 -5.24989 | overlap 2433239 CCAGATATGAAAAAA CCCGC ACGAG GCGGG CGAGAAGGTCAGCGG Swit_2173 2433572 - 2433279 - | hypothetical protein TERM 1139 2433551 - 2433535 - G 74 -15.1 -3.0634 | AAGGCCACGGCAAGA GCCGCCG CAT CGGCGGC GCGAAGGTCATAGCG Swit_2174 2436169 - 2433569 - | hypothetical protein Swit_2175 2436779 - 2436180 - | hypothetical protein Swit_2176 2439700 - 2436785 - | hypothetical protein TERM 1140 2439207 - 2439238 + g 70 -9.3 -3.89822 | opp_overlap 2439203 CCGGGCACATAGCGC GGCTCGCCCAGGC ACCAGG GCTTGGGGGTGCC TTTCTGCCCTGCCTC Swit_2177 2440500 - 2439700 - | hypothetical protein TERM 1141 2439805 - 2439793 - G 71 -10.5 -3.81488 | overlap 2439794 CGGCCCGAAATAGAA GCGGC GCT GCCGC ATGGCGTCGGCCGCC Swit_2178 2440866 - 2440504 - | hypothetical protein TERM 1142 2440693 - 2440667 - G 74 -12.3 -3.57263 | gap 1 ACCGGCACGGCGAAA CGCCGCCGCTCG ACGC CGAGCAG-GGCG CCGCGCTGGTCGACA TERM 1143 2440774 - 2440811 + g 93 -17 -3.64822 | opp_overlap 2440783, overlap 2440771 CCCTTCATCGCGGGC GCCGGGAAAGCGGGCC TTGATC GGCGCGCTTTCCCAGC TTTCGGTCAGGGCCT Swit_2179 2443892 - 2440866 - | hypothetical protein TERM 1144 2443939 - 2443914 - R 100 -16.9 -4.46212 | CGCTCCACGACAAAA GGGGCACAGAC TTGC GCCTGTGCCCC AAAAATTCAGCAATG Swit_2180 2444475 - 2443984 - | hypothetical protein Swit_2181 2445246 - 2444536 - | hypothetical protein TERM 1145 2444722 - 2444699 - G 71 -10.9 -3.55444 | TCGCCACGCTGGAAA CCCCGCCGC TCGTCT GCGGCGGTG CGCTGCCGGGTGATC Swit_2182 2446089 - 2445406 - | hypothetical protein TERM 1146 2445499 - 2445517 + g 89 -6.6 -5.1101 | CAGGCCGTCGTCGGA CTTCGAGG CCG CCCCGGAG TTTTTTGCGTGCTGC TERM 1147 2446027 - 2446015 - G 71 -10.5 -3.71848 | opp_overlap 2446024 GGGCCGCAGGAAGAA GGCCG GCG CGGCC GGGTCGGCCTTGTCG Swit_2183 2446153 - 2446428 + | plasmid maintenance system killer Swit_2184 2446474 - 2446782 + | XRE family plasmid maintenance system antidote protein Swit_2185 2448012 - 2446783 - | hypothetical protein Swit_2186 2448465 - 2448025 - | hypothetical protein Swit_2187 2448785 - 2448462 - | hypothetical protein Swit_2188 2449156 - 2448785 - | hypothetical protein TERM 1148 2449204 - 2449173 - R 95 -11.4 -4.56597 | opp_overlap 2449171 2449173 2449173, overlap 2449175 2449189 CGGCGGCCTGAAAAA GAGGGCGGCCCCGA AAGC CCGGAGCCGCCCGG CTGTTTGTATGGAGA TERM 1149 2449202 - 2449175 - R 100 -18.4 -3.90048 | opp_overlap 2449173 2449173 2449171, overlap 2449173 2449189 GCGGCCTGAAAAAGA GGGCGGCCCCGA AAGC CCGGAGCCGCCC GGCTGTTTGTATGGA TERM 1150 2449242 - 2449222 - R 74 -9 -3.91897 | GTTTGTATGGAGAAA CCGATCAG GCAAT CTGACCGG TGAGAAGAACGCTAC Swit_2189 2449564 - 2449226 - | hypothetical protein TERM 1151 2449578 - 2449616 + r 88 -14.4 -3.78329 | opp_overlap 2449560 2449581, overlap 2449579 ATCGCTTGTCTCCAG AAACGACGAAGGGCGGCC GAT GGCCGCCCCTCGTCGAGC TTTCAGTTGATGGGC TERM 1152 2449579 - 2449615 + r 90 -17.9 -2.86676 | opp_overlap 2449560 2449581, overlap 2449578 TCGCTTGTCTCCAGA AACGACGAAGGGCGGCC GAT GGCCGCCCCTCGTCGAG CTTTCAGTTGATGGG TERM 1153 2449613 - 2449581 - R 100 -27.1 -3.85698 | opp_overlap 2449579 2449578, overlap 2449560 GCTTGTCTCCAGAAA CGACGAAGGGCGGCC GAT GGCCGCCCCTCGTCG AGCTTTCAGTTGATG Swit_2190 2451710 - 2449644 - | peptidase S14, ClpP Swit_2191 2453216 - 2451723 - | lambda family phage portal protein TERM 1154 2452228 - 2452273 + g 87 -22.8 -2.81464 | opp_overlap 2452237 TAGTCGCCATATCCG TCCACCGAAGGCGGCGAGG-CG AACT CGACCTTGCCGCCTTCGG-GGA TGTCGTAGATCATGC TERM 1155 2452401 - 2452378 - G 73 -7.4 -4.1964 | gap 1, opp_overlap 2452368, overlap 2452381 TTGAACACCGCAAAA CAGGCGGC-GA TTT TCTGCCGCATG ACCTGCGCGTCCTCA Swit_2192 2453440 - 2453213 - | hypothetical protein Swit_2193 2455479 - 2453422 - | phage terminase GpA TERM 1156 2454221 - 2454205 - GR 73 -11.5 -3.61517 | ATCCCGGCTGAACAA GGGCAGC AAC GCCGCCC AATGCTCGCGATACC TERM 1157 2454522 - 2454508 - GR 91 -9.2 -4.56597 | opp_overlap 2454508 CTTGCCGTTGAAAAA GCCGAC CAG GCCGGC TTCGCTTTGCAGCGT TERM 1158 2454712 - 2454730 + gr 71 -3.1 -4.56597 | gap 1 CGTCCGCTTGTGATG CGGCT-CG ATGA TGCAGCCG TTTTTCGAACAGACG TERM 1159 2455058 - 2455037 - GR 71 -12.9 -3.05596 | opp_overlap 2455034 TAGTCGTCGACCCAA CCGCGCGGC ACCG GCCGCGCGC GGAAATTCTCGGCGG TERM 1160 2455200 - 2455149 - GR 74 -15 -2.62616 | opp_overlap 2455125 2455147 2455155 CGACCTCGGATAGGA GCTGCCCGCGTAGCGCCGACGTGC TCTT GATCATCGGCGCCACGCGGCGAAC GACGAAATCCTGCGT Swit_2194 2456101 - 2455412 - | hypothetical protein TERM 1161 2456246 - 2456208 - R 74 -10 -3.71527 | overlap 2456209 CCGGAAGGACCCAAA GGGGGGAGGGGTGCCGGC CTC GCGGCCTCCCCTGCGCCC CTCCCCCTGCCGCGC TERM 1162 2456394 - 2456354 - R 100 -19.6 -4.07568 | opp_overlap 2456354, overlap 2456355 CTCGCCTCCCCAAAA CGCCCGCGCCCCGCTGGC ACGGG GCGAGCGGGGCGCGGCAG TCTTAGGAGAGGATG TERM 1163 2456354 - 2456394 + r 93 -19.6 -3.01924 | opp_overlap 2456354 2456355 CTCGCCTCCCCAAAA CGCCCGCGCCCCGCTGGC ACGGG GCGAGCGGGGCGCGGCAG TCTTAGGAGAGGATG TERM 1164 2456392 - 2456355 - R 93 -20.6 -3.04398 | gap 1, opp_overlap 2456354, overlap 2456354 TCGCCTCCCCAAAAC GCCCGCGCCCCGCTGGC ACGGG GCGAGCGGGGCGC-GGC AGTCTTAGGAGAGGA Swit_2195 2457012 - 2456515 - | hypothetical protein Swit_2196 2460099 - 2457232 - | P4 family phage/plasmid primase TERM 1165 2459347 - 2459368 + g 75 -9.3 -4.13767 | overlap 2459348 GGTGGGGCGCGATGA TGCCGGCGC ATTC GCGCCGACG TTTTCCGATGGGGCG Swit_2197 2460140 - 2460643 + | hypothetical protein TERM 1166 2460664 - 2460688 + T 77 -13.6 -3.29096 | CGACACCGCCACGCC CCGATGCTGC ACAAC GCAGCGTCGG TTGATCCTTCCTGAA TERM 1167 2460813 - 2460841 + T 73 -8.2 -3.99324 | gap 1, opp_overlap 2460824 ACGTCGTCGTCGAGA TCGCCGCCAAACG CGTC CGTTTCGCG-CGA TTTCTGCTGCTGGCC Swit_2198 2461243 - 2460788 - | single-strand binding protein Swit_2199 2462122 - 2461256 - | D12 class N6 adenine-specific DNA methyltransferase Swit_2200 2462725 - 2462420 - | hypothetical protein Swit_2201 2462958 - 2462722 - | hypothetical protein Swit_2202 2463178 - 2462951 - | hypothetical protein Swit_2203 2463546 - 2463175 - | hypothetical protein Swit_2204 2464208 - 2463543 - | hypothetical protein TERM 1168 2463635 - 2463622 - G 73 -8.1 -4.15222 | ATGCCGGGGAAGAAA CGCGA GCGC TCGCG CTGCCGATCGCGGCT Swit_2205 2464525 - 2464205 - | hypothetical protein Swit_2206 2465228 - 2464647 - | hypothetical protein Swit_2207 2465821 - 2465225 - | hypothetical protein Swit_2208 2466412 - 2465825 - | hypothetical protein TERM 1169 2466934 - 2466916 - H 83 -7.4 -4.59109 | GATATCCGGGAAAAA TCCCAATG CGT CAATGGGA AAAATCCCAAGTGCA Swit_2209 2466980 - 2467732 + | putative phage repressor Swit_2210 2468101 - 2467733 - | hypothetical protein Swit_2211 2468231 - 2468539 + | hypothetical protein Swit_2212 2468926 - 2469126 + | hypothetical protein Swit_2213 2469205 - 2469600 + | hypothetical protein Swit_2214 2469597 - 2470130 + | hypothetical protein TERM 1170 2470426 - 2470462 + G 82 -6.5 -4.74504 | gap 1 CGACAGCGCCGCCCG GCTCGCGTTG-CCGCT GATCGA AGCCGACCGCGCGAGC TTTTTCGATTGCCAT Swit_2215 2470127 - 2470594 + | hypothetical protein Swit_2216 2470591 - 2471046 + | hypothetical protein Swit_2217 2471043 - 2471528 + | hypothetical protein Swit_2218 2471534 - 2471908 + | hypothetical protein Swit_2219 2471951 - 2473627 + | recombinase TERM 1171 2473778 - 2473802 + T 71 -11.4 -3.53761 | CGTCAAATGCTGTTC GCGCCGCC CGCGCCCTT GGCGGCGC TTTACGCGAAACTTA TERM 1172 2473918 - 2473951 + T 81 -13.8 -3.64703 | gap 1, overlap 2473919 2473921 GGCCTGCGAGCCCCT CGG-GTGGGCGGGGC ATCGC GCCCCGCCCGCTCCC TTTGGATCAGAACCA TERM 1173 2473919 - 2473950 + T 84 -17.3 -2.78679 | gap 1, overlap 2473918 2473921 GCCTGCGAGCCCCTC GG-GTGGGCGGGGC ATCGC GCCCCGCCCGCTCC CTTTGGATCAGAACC TERM 1174 2473921 - 2473947 + T 87 -18.7 -2.66272 | overlap 2473919 2473918 CTGCGAGCCCCTCGG GTGGGCGGGGC ATCGC GCCCCGCCCGC TCCCTTTGGATCAGA Swit_2220 2474983 - 2473958 - | copper resistance B precursor Swit_2221 2476671 - 2474980 - | CopA family copper resistance protein TERM 1175 2476741 - 2476712 - R 91 -17.1 -3.33696 | opp_overlap 2476739, overlap 2476713 GGGGCGTGTAACGAA TGGGAGGGAGCGG CGAG CCGCCCCCTCCCC GCACGTCAATGATCG TERM 1176 2476740 - 2476713 - R 91 -20.6 -2.60075 | opp_overlap 2476739, overlap 2476712 GGGCGTGTAACGAAT GGGAGGGAGCGG CGAG CCGCCCCCTCCC CGCACGTCAATGATC Swit_2222 2476992 - 2476747 - | hypothetical protein Swit_2223 2477351 - 2477016 - | hypothetical protein Swit_2224 2478796 - 2477417 - | amidohydrolase Swit_2225 2479883 - 2478870 - | AraC family transcriptional regulator TERM 1177 2480712 - 2480750 + G 70 -12.5 -3.31726 | opp_overlap 2480693, overlap 2480710 2480713 AGGCGGTGCTCAACC TGCCGCT-CGTCGCCGACA AGC TGTCGGTG-CGCGGCGGCG TCTTCTATCGCCACG TERM 1178 2482389 - 2482417 + G 70 -12.3 -3.28712 | CGACGATCCGGCCGC GCACCGTCGGCCT CGA AGTCCGGCGGCGC TTCTAAACGGCCGCA Swit_2226 2480066 - 2482423 + | TonB-dependent receptor, plug TERM 1179 2483833 - 2483805 - g 76 -13.2 -3.47526 | gap 1, overlap 2483797 2483803 GGAGCAACCGAAATA CCG-GCCCTACAG CAAC CTGCAGGGCTCGG CCGCCTCCTTCCCCA Swit_2227 2482495 - 2484612 + | Pyrrolo-quinoline quinone Swit_2228 2484710 - 2485192 + | hypothetical protein Swit_2229 2485399 - 2485205 - | hypothetical protein TERM 1180 2486450 - 2486408 - g 81 -12.9 -3.84406 | gap 2, opp_overlap 2486423 CGGCGACGAGAACAA CAGCTTCA--GCATCGACGGC CGC GCCGTCTATGCGCCGAAGCTG GGCGGGACGCAGATC Swit_2230 2485668 - 2487044 + | phosphate-selective porin O and P TERM 1181 2487049 - 2487081 + T 91 -17.7 -3.11634 | overlap 2487053 TCGACTTCTGATCGG TGAAGGCGCGCGCGG CAA TCGCGCGCCCCTTCG TTCCGTCGTCTCAGA TERM 1182 2487053 - 2487077 + T 82 -14.9 -3.38584 | overlap 2487049 CTTCTGATCGGTGAA GGCGCGCGCGG CAA TCGCGCGCCCC TTCGTTCCGTCGTCT Swit_2231 2487934 - 2487092 - | hypothetical protein Swit_2232 2489668 - 2488151 - | sulphate transporter Swit_2233 2490354 - 2489665 - | carbonate dehydratase Swit_2234 2491915 - 2490587 - | integral membrane sensor signal transduction histidine kinase Swit_2235 2492622 - 2491912 - | two component transcriptional regulator TERM 1183 2492735 - 2492710 - H 83 -7.5 -4.66163 | opp_overlap 2492710 AGCGGTACGCAAAAA CCGTTGCAGCA TCGC CGCAGCAACAG TTTGAAATGGTCACG TERM 1184 2492787 - 2492768 - H 73 -6.4 -4.37092 | gap 1, opp_overlap 2492768, overlap 2492754 2492770 ACCGCCGCGAGAAAA TG-CCGCCC GGC GAGCGGACA TGATTTCTTACACGA Swit_2236 2492869 - 2493129 + | hypothetical protein TERM 1185 2493189 - 2493161 - T 90 -18.1 -3.06183 | opp_overlap 2493161 GCCAGCGGCACGGAA GCGGGCCCGTCCG GCT CGAACGGGCTCGC TTCCCTTGGCCTTCA TERM 1186 2493161 - 2493189 + T 91 -18.1 -3.19246 | opp_overlap 2493161 GCCAGCGGCACGGAA GCGGGCCCGTCCG GCT CGAACGGGCTCGC TTCCCTTGGCCTTCA Swit_2237 2494770 - 2493202 - | AMP-dependent synthetase and ligase Swit_2238 2495309 - 2494875 - | hypothetical protein Swit_2239 2496373 - 2495321 - | Rieske (2Fe-2S) domain-containing protein Swit_2240 2498472 - 2496385 - | TonB-dependent siderophore receptor Swit_2241 2499361 - 2498615 - | arsenate resistance ArsH Swit_2242 2500026 - 2499358 - | major intrinsic protein Swit_2243 2500457 - 2500023 - | arsenate reductase Swit_2244 2500801 - 2500469 - | ArsR family transcriptional regulator TERM 1187 2500829 - 2500794 - G 70 -15.1 -2.71731 | opp_overlap 2500805, overlap 2500805 GCGATGGCCGAATCA TTATCCATATATCCA GCATAG TGGATATATGGATAA TGGCTAGAGGGTGGA Swit_2245 2501487 - 2500864 - | glutathione S-transferase domain-containing protein Swit_2246 2504247 - 2501548 - | regulatory protein, LuxR TERM 1188 2504584 - 2504611 + G 73 -16.4 -2.50016 | gap 1, overlap 2504583 2504582 GCCGCTCGACCTCGC CGCGATCGATCCG GCG CGGATCGA-CGCG ATCTTCCTGGTCGGC Swit_2247 2504318 - 2505001 + | ThiJ/PfpI domain-containing protein Swit_2248 2505908 - 2505015 - | palmitoyl-CoA hydrolase TERM 1189 2505720 - 2505690 - G 73 -12.5 -3.44848 | opp_overlap 2505704, overlap 2505688 GGCGCGCACGAAATA GGCGTGGCAGCTA TGCGC CAGCCGCCCCGCC GCGACGCTGTGCTGC Swit_2250 2507038 - 2506406 - | NAD(P)H dehydrogenase (quinone) Swit_2249 2505945 - 2506460 + | dehydratase Swit_2251 2507345 - 2507031 - | Rieske (2Fe-2S) domain-containing protein Swit_2252 2508505 - 2507345 - | acyl-CoA dehydrogenase domain-containing protein Swit_2253 2509752 - 2508532 - | Rieske (2Fe-2S) domain-containing protein TERM 1190 2509326 - 2509315 - G 72 -5.8 -4.26076 | opp_overlap 2509320 CGACCGGCAGGAAAA GTCG AGGT CGAC GAAGTCGCGCTTGTC Swit_2254 2509825 - 2510664 + | xylose isomerase domain-containing protein Swit_2255 2510661 - 2511185 + | methylmalonyl-CoA epimerase Swit_2256 2511656 - 2511177 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1191 2511295 - 2511348 + g 78 -17.3 -2.73875 | gap 1, overlap 2511293 TAGGTGGCGCGGGTC GCGGCCGATC-CGCCGGGCGGGCCGT TGA ACGCCATGCCCAGCGCGGTCAGCCGC TCATATTCGGCGAAG Swit_2257 2512470 - 2511664 - | short-chain dehydrogenase/reductase SDR TERM 1192 2512518 - 2512503 - H 73 -3.2 -4.72272 | opp_overlap 2512505, overlap 2512505 CCGCGCCATTAAAAA CAGGCA TGAC TGCCTT TTTCAAGACCACTAT TERM 1193 2512505 - 2512516 + H 76 -5.8 -4.56775 | opp_overlap 2512503 2512505 GCGCCATTAAAAACA GGCA TGAC TGCC TTTTTCAAGACCACT Swit_2258 2512669 - 2513595 + | short-chain dehydrogenase/reductase SDR Swit_2259 2513622 - 2514392 + | short-chain dehydrogenase/reductase SDR Swit_2260 2515939 - 2514593 - | Rieske (2Fe-2S) domain-containing protein Swit_2261 2517291 - 2515936 - | Rieske (2Fe-2S) domain-containing protein Swit_2262 2517395 - 2517928 + | hypothetical protein TERM 1194 2518264 - 2518297 + G 70 -12.3 -3.28924 | gap 1 TCCGGCGAGCTCGCT GGTCGCG-CGCGGCGG GGC CCGCCCCGACGAGGCC TTCTACGCGGCGGTC Swit_2263 2518001 - 2518558 + | hypothetical protein TERM 1195 2518702 - 2518666 - T 70 -10 -3.60296 | opp_overlap 2518668, overlap 2518668 2518673 CACGTCCATCGCAAA GACTGAACGGCGCCCG TCACG CGGGCGCCGTCCCCTT CGGTCAGTTGCCGAG TERM 1196 2518700 - 2518668 - T 74 -12.6 -3.38046 | opp_overlap 2518668, overlap 2518666 2518673 CGTCCATCGCAAAGA CTGAACGGCGCCCG TCACG CGGGCGCCGTCCCC TTCGGTCAGTTGCCG TERM 1197 2518695 - 2518673 - T 91 -17.7 -3.24289 | opp_overlap 2518668, overlap 2518668 2518666 ATCGCAAAGACTGAA CGGCGCCCG TCACG CGGGCGCCG TCCCCTTCGGTCAGT Swit_2264 2521183 - 2518706 - | TonB-dependent receptor Swit_2265 2521438 - 2521734 + | antibiotic biosynthesis monooxygenase TERM 1198 2521763 - 2521803 + G 70 -15.4 -2.73875 | overlap 2521771 CACCTATGGCGCGAT GCTGCG-CGCCAGCGCCGCG GCG CGCGGCGATGCCGACGC-GC TGGTCTTCCCCGACC Swit_2266 2521731 - 2523368 + | AMP-dependent synthetase and ligase Swit_2267 2523365 - 2523661 + | antibiotic biosynthesis monooxygenase Swit_2268 2525189 - 2523783 - | dehydrogenase catalytic domain-containing protein TERM 1199 2525211 - 2525238 + r 73 -12.6 -3.21276 | overlap 2525210 2525212 GCCCCTCAGCCGGCG GCGAGGGCGCGG CGGA CCGCGGCCTCGA TCTTCTGCGGCGACG TERM 1200 2525212 - 2525237 + r 79 -16.1 -2.52623 | overlap 2525211 2525210 CCCCTCAGCCGGCGG CGAGGGCGCGG CGGA CCGCGGCCTCG ATCTTCTGCGGCGAC Swit_2269 2526211 - 2525201 - | transketolase, central region Swit_2270 2527200 - 2526226 - | pyruvate dehydrogenase (acetyl-transferring) Swit_2271 2528542 - 2527211 - | Rieske (2Fe-2S) domain-containing protein Swit_2272 2529317 - 2528556 - | short-chain dehydrogenase/reductase SDR TERM 1201 2529334 - 2529362 + H 72 -12.3 -3.34947 | TTCACCTCTCCGCCC GTCGCCGGCGATG CCA CTTCGCCGCCGGC TTCTCCCCCTTCTTC Swit_2273 2529552 - 2530262 + | TetR family transcriptional regulator Swit_2274 2530981 - 2530250 - | hypothetical protein Swit_2275 2531053 - 2532258 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1202 2532275 - 2532308 + G 77 -14.5 -3.21099 | gap 1 CGCGACCGGACCCGA GCGCCACT-GGCGCGC CGC GCTCGCCGAGGGGCGC TTCCTGCTCCAGCGC Swit_2276 2532255 - 2532626 + | hypothetical protein Swit_2277 2532629 - 2533780 + | thiolase TERM 1203 2533990 - 2533967 - T 100 -17.4 -4.87133 | ATGTTTCAAAGAAAA GGGGCCGGCC CGAA GGCCGACCCC GATCCTGCGCGTCAT Swit_2278 2535150 - 2534029 - | OmpA/MotB domain-containing protein Swit_2279 2536147 - 2535377 - | enoyl-CoA hydratase/isomerase Swit_2280 2536691 - 2536140 - | hypothetical protein Swit_2281 2537150 - 2536776 - | HxlR family transcriptional regulator TERM 1204 2537577 - 2537618 + G 71 -10.7 -3.65812 | gap 1, overlap 2537596 GGCGCCGAAGGCCTG GCCGGCG-GCAAGCGCGCGA TCG TCGCGCTGTCGCGCGGCGGC TTCTATTCGGAGGGC Swit_2282 2537226 - 2537822 + | NAD(P)H dehydrogenase (quinone) Swit_2283 2539181 - 2537859 - | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Swit_2284 2539804 - 2539196 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1205 2539381 - 2539355 - G 74 -13 -3.65046 | GCCGGAGGCGAAGAA GCGCTCGACGCC CTC GACGTCGAACAC GTCGTACTGGAGCTC Swit_2285 2540938 - 2539835 - | vanillate monooxygenase TERM 1206 2540958 - 2540978 + H 83 -12.5 -3.85165 | CTCTCCCTCGATTCC CGGCCGTCG TTG CGGCGGCTG TTTCGATTTGACCTA TERM 1207 2541046 - 2541059 + H 76 -9.5 -4.07568 | overlap 2541043 GCCGCTCTTCGCGGC GGGCG AAGC CGCCC TTTTCCACGGAGGAG Swit_2286 2541080 - 2541979 + | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_2287 2543154 - 2541970 - | major facilitator transporter TERM 1208 2542102 - 2542074 - G 74 -12.3 -3.59979 | overlap 2542059 GCGCCTGATCGGAAA GGCCGGCGCCGAG CAT CTCGCCGCCGATC AGCGGCCCGGCGATC Swit_2288 2544554 - 2543151 - | endoribonuclease L-PSP Swit_2289 2545576 - 2544614 - | beta-lactamase domain-containing protein Swit_2290 2546258 - 2545614 - | hypothetical protein TERM 1209 2545820 - 2545861 + g 70 -15.7 -2.78384 | CCGCCAGCCGGAAGC GCTGGCGCGGGCTGGCGCC GCAC GGCGCGAGCACGACCCAGC TATCCTCGCGGACGA Swit_2291 2549023 - 2546255 - | TonB-dependent receptor TERM 1210 2547664 - 2547686 + g 73 -9.8 -3.8917 | CGGTCTGGATCAGCC CCTGGTCGAC CGC GTCGACCGCG TTGTTGTAGTTGGCG TERM 1211 2548763 - 2548718 - G 72 -13.3 -3.15544 | gap 1, opp_overlap 2548726 GCGCAGGTTGAGGAA GCTCGCCCCCGACGACGAACCG TTG CGGTTGGTGGTCGGCGAC-AGC GAATTGGAGAGCTGT TERM 1212 2549634 - 2549660 + G 74 -13 -3.65046 | GAGCTCCAGTACGAC GTGTTCGACGTC GAG GGCGTCGAGCGC TTCTTCGCCTCCGGC Swit_2292 2549226 - 2549819 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_2293 2549850 - 2550536 + | GntR family transcriptional regulator Swit_2294 2551526 - 2550567 - | alcohol dehydrogenase Swit_2295 2552460 - 2551564 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_2296 2552882 - 2552457 - | hypothetical protein Swit_2297 2552936 - 2553853 + | TetR family transcriptional regulator Swit_2298 2555785 - 2554043 - | monooxygenase, FAD-binding TERM 1213 2555778 - 2555791 + g 86 -3.1 -5.10029 | ACACCGGTTCTGATC GTTTC CATG GAAGC TTTTTTACCGTTGGT Swit_2299 2556819 - 2555806 - | beta-lactamase domain-containing protein TERM 1214 2556028 - 2556049 + g 72 -14.4 -3.14564 | opp_overlap 2556022 GGGATCATAGCCCTG CGGCGCCG AGCTGC CGGCGCCG TTGATCCGGGCGTCG TERM 1215 2556057 - 2556088 + g 87 -17.3 -3.25223 | gap 1 CGGCGCCGTTGATCC GGGCGTCGCCGTCG GCCGG CGGCGGCG-CGCCC TTCATCATCTCGATC Swit_2300 2559011 - 2556819 - | TonB-dependent receptor TERM 1216 2559478 - 2559448 - R 100 -19.1 -4.34402 | opp_overlap 2559446, overlap 2559415 2559412 GCGCCGACACGAAAA CGCCGGACCGAAG ACGGG CTTCGATCCGGCG CGTTGGTCGCGGTCC Swit_2301 2561720 - 2559528 - | TonB-dependent receptor Swit_2302 2562924 - 2561893 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_2303 2563999 - 2562962 - | gluconolactonase Swit_2304 2564925 - 2563996 - | hypothetical protein Swit_2305 2566051 - 2565101 - | LysR family transcriptional regulator TERM 1217 2566197 - 2566220 + H 71 -10.9 -3.53012 | opp_overlap 2566197 2566196, overlap 2566175 GCGCGCGGGAATAAG GGCCGCCCG CCGCGC CGTGCGGCC TTTGGGGAGGAAGGA Swit_2306 2566239 - 2567027 + | gluconate 5-dehydrogenase Swit_2307 2567053 - 2567937 + | short-chain dehydrogenase/reductase SDR Swit_2308 2569146 - 2568082 - | amidohydrolase 2 Swit_2309 2569703 - 2569158 - | hypothetical protein Swit_2310 2569758 - 2570846 + | vanillate monooxygenase Swit_2311 2570827 - 2571831 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_2312 2572108 - 2573322 + | acyl-CoA dehydrogenase type 2 TERM 1218 2573374 - 2573339 - T 100 -16 -4.07568 | opp_overlap 2573342, overlap 2573342 CCCCGGCCGGCAAAA GCAGGGGCGGTCGCCG GAAT CGGCGGCCGCCCCTTT TCGTTCAGAGGCCGA TERM 1219 2573342 - 2573371 + T 100 -24.3 -4.4078 | opp_overlap 2573342 2573339 CGGCCGGCAAAAGCA GGGGCGGTCGCCG GAAT CGGCGGCCGCCCC TTTTCGTTCAGAGGC TERM 1220 2573371 - 2573342 - T 100 -22.1 -3.08032 | opp_overlap 2573342, overlap 2573339 CGGCCGGCAAAAGCA GGGGCGGTCGCCG GAAT CGGCGGCCGCCCC TTTTCGTTCAGAGGC Swit_2313 2574440 - 2573379 - | amidohydrolase 2 Swit_2314 2574632 - 2575501 + | NmrA family protein Swit_2315 2576135 - 2575518 - | 3-isopropylmalate dehydratase, small subunit Swit_2316 2577581 - 2576139 - | 3-isopropylmalate dehydratase, large subunit Swit_2317 2578501 - 2577578 - | pyruvate carboxyltransferase Swit_2318 2579760 - 2578498 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_2319 2580836 - 2579799 - | LysR family transcriptional regulator TERM 1221 2580863 - 2580812 - G 91 -11.4 -4.54727 | overlap 2580827 2580858 GTCCCCAAATGAAAA GGGCCCAAATGAAAAGGGGCGGCA TCGC TGCCGCCCCTCGCCAATAGCGTCC ACCGGGGGAAAGCCC TERM 1222 2580848 - 2580827 - G 100 -17.3 -4.54727 | overlap 2580812 GGGCCCAAATGAAAA GGGGCGGCA TCGC TGCCGCCCC TCGCCAATAGCGTCC Swit_2320 2581164 - 2580889 - | histone family protein DNA-binding protein Swit_2321 2582705 - 2581365 - | hypothetical protein Swit_2322 2582819 - 2583487 + | OmpA/MotB domain-containing protein TERM 1223 2583598 - 2583553 - T 84 -11.4 -4.20868 | gap 3, overlap 2583554 GCGGTAAAACAACAA TCTAGAGCGG--C-CGATCCGAT GCA ATCGGATCGTGAACCGCTCTAGC GCCGGGCGGCGAAGA TERM 1224 2583597 - 2583554 - T 80 -14.9 -3.11798 | gap 3, overlap 2583553 CGGTAAAACAACAAT CTAGAGCGG--C-CGATCCGAT GCA ATCGGATCGTGAACCGCTCTAG CGCCGGGCGGCGAAG Swit_2323 2584046 - 2583594 - | tRNA-adenosine deaminase TERM 1225 2583721 - 2583699 - G 74 -12 -3.61398 | CGGCTGGGTGAAGAA GCGCGGTC CGTTGGC GACCGCGC CACCCTTCGGATCGT Swit_2324 2584291 - 2584079 - | hypothetical protein Swit_2325 2584746 - 2584288 - | hypothetical protein rpmB 2584761 - 2585054 + | 50S ribosomal protein L28 TERM 1226 2585097 - 2585118 + T 100 -13.7 -4.97461 | opp_overlap 2585097 GGGACGGATATGAAA CCGGATCGC TCGC GCGGTCCGG TTTTTGCTGTTTGTT TERM 1227 2585118 - 2585097 - T 79 -11.5 -3.84825 | opp_overlap 2585097 GGGACGGATATGAAA CCGGATCGC TCGC GCGGTCCGG TTTTTGCTGTTTGTT TERM 1228 2585166 - 2585183 + T 73 -12.7 -3.14468 | CCTCAAGCGCCGGGC GCGAGGC ATCC GCCTCGC TTGGCTCTCCTCGCA Swit_2327 2586370 - 2585312 - | hypothetical protein Swit_2328 2586475 - 2586870 + | 17 kDa surface antigen TERM 1229 2586962 - 2587005 + T 82 -14.6 -3.34398 | gap 1, overlap 2586960 2586994 2586999 GCGTGGCGTTGTGGG GAGGAGGGCCGTCGGTCTC GCTGGAG GAG-TCGGCGGCCCTCCAC TATTTGCGCGCAGCG TERM 1230 2586994 - 2587037 + T 100 -22 -4.19746 | gap 1, overlap 2586962 2586960 2586999 TCGCTGGAGGAGTCG GCGGCCCTCCACTATTTGCGC GCA GCGCAAATAGTGGAGG-TTGC TTGTTTTGGCCTCAG TERM 1231 2586999 - 2587033 + T 100 -26 -3.68798 | overlap 2586962 2586960 2586994 GGAGGAGTCGGCGGC CCTCCACTATTTGCGC GCA GCGCAAATAGTGGAGG TTGCTTGTTTTGGCC TERM 1232 2587141 - 2587130 - T 76 -5.8 -4.62772 | overlap 2587134 2587137 TCCAAATCAAACAAA GCAG CAAG CTGC TCGACCATGGTGCCG Swit_2329 2588943 - 2587105 - | cobalt chelatase, pCobT subunit Swit_2330 2589644 - 2588943 - | protein tyrosine/serine phosphatase TERM 1233 2589215 - 2589175 - G 71 -11.7 -3.54475 | overlap 2589176 TTGGTGAGCAGATAA TCCTCGACGATCGTCGCGC GCG GCACGCCGAGCGCCGAGAG GATCAGCATCGCGCC TERM 1234 2589214 - 2589176 - G 70 -15.2 -2.72471 | overlap 2589175 TGGTGAGCAGATAAT CCTCGACGATCGTCGCGC GCG GCACGCCGAGCGCCGAGA GGATCAGCATCGCGC Swit_2331 2590708 - 2589704 - | hydrogenobyrinic acid a,c-diamide cobaltochelatase Swit_2332 2591357 - 2590755 - | heat shock protein DnaJ domain-containing protein Swit_2333 2591385 - 2591693 + | transcriptional regulator BolA Swit_2334 2591763 - 2591945 + | hypothetical protein TERM 1235 2591960 - 2592006 + F 100 -21.6 -3.40403 | opp_overlap 2591960 2591961, overlap 2591965 GGGCGCGATCCCAAA TCTGGCCGGGCCGCCGCGCA GCCCCTG TGCGCGGCGGCCCGCTTGGA TTATCATCGGCCGCA TERM 1236 2592006 - 2591960 - f 85 -15 -3.59979 | opp_overlap 2591960 2591965, overlap 2591961 GGGCGCGATCCCAAA TCTGGCCGGGCCGCCGCGCA GCCCCTG TGCGCGGCGGCCCGCTTGGA TTATCATCGGCCGCA TERM 1237 2592004 - 2591961 - f 84 -17.4 -2.75844 | gap 1, opp_overlap 2591960 2591965, overlap 2591960 GGCGCGATCCCAAAT CTGGCCGGGCCGCCGCGCA GCCCCTG TGCGCGGCGGCCCG-CTTG GATTATCATCGGCCG TERM 1238 2591965 - 2592001 + F 100 -22.3 -3.25072 | opp_overlap 2591961 2591960, overlap 2591960 CGATCCCAAATCTGG CCGGGCCGCCGCGCA GCCCCTG TGCGCGGCGGCCCGC TTGGATTATCATCGG Swit_2335 2592021 - 2592371 + | hypothetical protein Swit_2336 2593443 - 2592379 - | hypothetical protein TERM 1239 2592442 - 2592412 - G 73 -10.4 -3.83155 | CAGGAAGATGAAGAA GATCAGCGCGGC GCTATAG GCCGCGACGATC AGCGCGACGGTGCGC Swit_2337 2593542 - 2594831 + | glutamate-5-semialdehyde dehydrogenase TERM 1240 2594860 - 2594877 + F 70 -12.7 -2.8805 | overlap 2594861 2594864 GCCCCCACCCCGTCA TGCCGGC GGAG GCCGGCA TCTCTGGCGGCTCCT TERM 1241 2594914 - 2594946 + F 79 -8.4 -4.30576 | gap 1, overlap 2594916 GCCTCTTCTCCTCTC TCCTGAGATCCCGGC CTCC GCCGGGATGAC-GGA TTTTGGTGATCGCCC TERM 1242 2595741 - 2595760 + G 78 -10 -4.13945 | gap 1 AAATATGGCTGGGAC GCGCTG-GC CGG GCTCAGCGC TTTTGCCGTCGCCAT Swit_2338 2595033 - 2596352 + | sodium:dicarboxylate symporter TERM 1243 2596507 - 2596536 + G 74 -12.8 -3.57144 | gap 1 TCCGCAAAGTCCTCG CCGCC-GCCGCGC CGCTC GCGCTGCTGGCGG TTTCCGCCTGCACCC Swit_2339 2596482 - 2597135 + | hypothetical protein TERM 1244 2597171 - 2597148 - T 81 -12.4 -3.86822 | overlap 2597149 TAAGGGCCCGACAAA GCCCCTCCCT TTCA AGGGAGGGGT TAGGAGTGGGTAACG TERM 1245 2597170 - 2597149 - T 79 -15.9 -2.91772 | overlap 2597148 AAGGGCCCGACAAAG CCCCTCCCT TTCA AGGGAGGGG TTAGGAGTGGGTAAC Swit_2340 2600759 - 2597292 - | DNA polymerase III, alpha subunit TERM 1246 2597483 - 2597541 + g 82 -16.6 -3.29947 | gap 1, overlap 2597484 CGCGCTCGTCGGCCA TCAGCGCGGCGAGCGCCGGGATCGCCG CCGGAT CGGCGGTCTCGACG-TCGACGCGCAGC TTGATCTGCTGCATC TERM 1247 2597484 - 2597540 + g 82 -20.1 -2.57647 | gap 1, overlap 2597483 GCGCTCGTCGGCCAT CAGCGCGGCGAGCGCCGGGATCGCCG CCGGAT CGGCGGTCTCGACG-TCGACGCGCAG CTTGATCTGCTGCAT Swit_2341 2600971 - 2602326 + | cytochrome c peroxidase-like protein TERM 1248 2602361 - 2602333 - T 100 -21.7 -3.25942 | ACGCTCTGAGACCAA GGCGGGGGAGCGC GCG GCGCTTCCCCGCC GGCATGACGCGGCTA Swit_2342 2602781 - 2602374 - | TadE family protein Swit_2343 2603278 - 2602778 - | hypothetical protein Swit_2344 2605152 - 2603275 - | hypothetical protein Swit_2345 2605891 - 2605220 - | ABC transporter related Swit_2346 2607134 - 2605884 - | LolC/E family lipoprotein releasing system, transmembrane protein Swit_2347 2608611 - 2607298 - | prolyl-tRNA synthetase TERM 1249 2608925 - 2608950 + r 100 -20.5 -4.00532 | AATATCGTCACGCGG CGCCGGGATCG GGAA CGATCCCGGCG TTTGCTATTTCAGGG TERM 1250 2608987 - 2609037 + r 100 -14.8 -4.25104 | gap 2 CATCGCGAACCGCCG CGCTTCGGCCCCG-CC-CTATCGG CGGGA CGGATAGCGGACGGGACCGAGGCG TTTTCCTCGCCGAGA Swit_2348 2610998 - 2609364 - | CTP synthetase TERM 1251 2611083 - 2611068 - R 85 -3.2 -5.29782 | overlap 2611070 GATATCGACAAAAAA TTGTGG ACGA CCACGA AAAGGGTCGCGCCCC TERM 1252 2611115 - 2611087 - R 100 -13.8 -4.32034 | gap 1, opp_overlap 2611089, overlap 2611088 2611089 GGACGACCACGAAAA GGGTCGCGCCCCG GAAC CGGGGCGCG-CCT TTCATCCGCGGAAAT TERM 1253 2611114 - 2611088 - R 89 -17.3 -3.18738 | gap 1, opp_overlap 2611089, overlap 2611087 2611089 GACGACCACGAAAAG GGTCGCGCCCCG GAAC CGGGGCGCG-CC TTTCATCCGCGGAAA TERM 1254 2611114 - 2611089 - R 83 -17.5 -2.50761 | opp_overlap 2611089, overlap 2611088 2611087 ACGACCACGAAAAGG GTCGCGCCCCG GAAC CGGGGCGCGCC TTTCATCCGCGGAAA TERM 1255 2611089 - 2611114 + r 100 -17.5 -3.72576 | opp_overlap 2611088 2611087 2611089 ACGACCACGAAAAGG GTCGCGCCCCG GAAC CGGGGCGCGCC TTTCATCCGCGGAAA Swit_2349 2611514 - 2611140 - | protein translocase subunit secG TERM 1256 2611415 - 2611371 - G 72 -13.4 -3.14132 | gap 1 GGTGCGGGTCAGGAA GTCGGCCGCGCCGCGCGCGCT CATC AGCCCGC-CGGGGCTGCCGCC CGAGGTCAGCCCGCC Swit_2350 2612343 - 2611591 - | triosephosphate isomerase TERM 1257 2611653 - 2611705 + g 70 -13.1 -3.33261 | opp_overlap 2611633, overlap 2611654 CGGCGGTCAGGCTGG CGCCGCCGACCAGCGCGCCGTCGAC GTC GGCGACCGCGAGCAGCTCGGCCGCA TTGTCGGGCTTCACC TERM 1258 2611654 - 2611704 + g 73 -16.6 -2.59742 | opp_overlap 2611633, overlap 2611653 GGCGGTCAGGCTGGC GCCGCCGACCAGCGCGCCGTCGAC GTC GGCGACCGCGAGCAGCTCGGCCGC ATTGTCGGGCTTCAC Swit_2351 2612387 - 2614417 + | hypothetical protein Swit_2352 2614431 - 2615942 + | anthranilate synthase, component I TERM 1259 2616020 - 2616008 - f 70 -10.5 -3.5393 | ATCAGTCGCGGTAAA GCGGC CCG GCCGC TGGATCAAACCGCCG TERM 1260 2616161 - 2616181 + G 77 -11.1 -3.92869 | opp_overlap 2616160 AGCCTCGGCACAGAG CCCGTCCAG CAA CTGGACCGG TTTCTACGTGGGTGG TERM 1261 2616523 - 2616554 + G 72 -13.6 -3.23853 | gap 1, opp_overlap 2616509 2616508 2616520, overlap 2616524 TGCAGGCGAAGATGC GCAGCGGCGGCGCGC TCC GCGCGC-GCGGCGGC TATTCGTTCGACACC TERM 1262 2616791 - 2616770 - g 70 -8.7 -3.9461 | gap 1, overlap 2616775 2616778 CTCGCTGAAGAACAA CGACAGCACG GTG CGCGC-GTCG GGCGGCCCCGCCGGC Swit_2353 2616087 - 2616908 + | hypothetical protein TERM 1263 2616958 - 2616933 - T 100 -20.5 -4.28432 | opp_overlap 2616933 AAGCGTAACGGAAAA GGGCCGGAAGC GCGA GCTTCCGGCCC TTTTCTCATGGTTCG TERM 1264 2616933 - 2616958 + T 100 -20.5 -4.51097 | opp_overlap 2616933 AAGCGTAACGGAAAA GGGCCGGAAGC GCGA GCTTCCGGCCC TTTTCTCATGGTTCG Swit_2354 2618537 - 2616981 - | protease Do Swit_2355 2619587 - 2618718 - | band 7 protein Swit_2356 2620708 - 2619584 - | HflK protein Swit_2357 2620714 - 2621715 + | ATPase involved in chromosome partitioning-like protein Swit_2358 2621738 - 2622154 + | CoA-binding domain-containing protein TERM 1265 2622336 - 2622361 + G 74 -14.9 -3.06162 | ACGAGCGTATCGAGA TTTACCGTCTG CATG CAGACGGTAAA TCTTCGCGTGAGATC Swit_2359 2622290 - 2623288 + | integrase catalytic subunit Swit_2360 2624114 - 2623335 - | inositol monophosphatase Swit_2361 2625453 - 2624107 - | peptidase U62, modulator of DNA gyrase ubiA 2626636 - 2625650 - | prenyltransferase Swit_2363 2626737 - 2627369 + | hypothetical protein Swit_2364 2627411 - 2628781 + | glutamate--cysteine ligase TERM 1266 2628940 - 2628918 - f 70 -12.7 -2.94099 | CGTCGGCAGGAGACA CCCGCAACG GGGCT CGTCGCGGG AGAGAAATGCACCGG TERM 1267 2629151 - 2629127 - f 78 -6.3 -4.56597 | overlap 2629129 2629130 CGTTTCCGCGAAAAA TACCCTGCGGC CGC GACGCAGGATG CTGAAGATCGCGATC TERM 1268 2629149 - 2629129 - f 71 -8.9 -3.90048 | overlap 2629127 2629130 TTTCCGCGAAAAATA CCCTGCGGC CGC GACGCAGGA TGCTGAAGATCGCGA TERM 1269 2629736 - 2629775 + G 75 -4.8 -4.59773 | overlap 2629738 2629740 ACGATTTCCTGGTCT GCCGCTACAGCGAGGGCG GCAA CGTCATCGGTGAAGTGCC TTTTTGAAGATGACG Swit_2365 2629240 - 2629782 + | SCP-like extracellular Swit_2366 2630401 - 2629904 - | hypothetical protein Swit_2367 2630563 - 2631558 + | eight transmembrane protein EpsH Swit_2368 2631555 - 2632301 + | methanolan biosynthesis EpsI Swit_2369 2632579 - 2632310 - | hypothetical protein TERM 1270 2633460 - 2633442 - g 74 -13.8 -3.25823 | GGTCGCCGAGAGCAA GGCGCAGG TCG CCCGCGCC CGTACGAGCGCCGAG Swit_2370 2632690 - 2633550 + | hypothetical protein TERM 1271 2633529 - 2633564 + T 100 -26.4 -4.68209 | opp_overlap 2633520 2633538 GATCAAGGCCTCGCA GGCGAAGAAGGCTGCT AAAT AGCAGCCTTCTTCGCC TTTATTTGTTGGCCT TERM 1272 2633555 - 2633538 - T 73 -11.3 -3.65046 | opp_overlap 2633529 CTCGCAGGCGAAGAA GGCTGCT AAAT AGCAGCC TTCTTCGCCTTTATT TERM 1273 2633709 - 2633690 - T 82 -15 -3.30124 | CCTCATGCGGCAGAA CGGGACGC GCCA GCGTCCCG CAAGGCCGAACGGCC TERM 1274 2633768 - 2633751 - T 73 -12.7 -3.14468 | TGCGAGGATAGCCAA GCGAGGC GGAT GCCTCGC GCCCGGCGCTTGAGG Swit_2371 2635272 - 2633806 - | sugar transferase Swit_2372 2636927 - 2635266 - | TPR repeat-containing protein TERM 1275 2637274 - 2637306 + G 82 -17.8 -3.02144 | TGGCGGCCGGCAAGG CCGCGCTCGA-CGCCG ATC CGGCGCTCG-GCGCGG TGTTCGGGCGGCTGC Swit_2373 2636952 - 2637941 + | glycosyl transferase family protein Swit_2374 2637938 - 2639080 + | glycosyl transferase family protein Swit_2375 2640638 - 2639085 - | hypothetical protein Swit_2376 2640679 - 2641740 + | glycosyl transferase, group 1 Swit_2377 2643077 - 2641737 - | polysaccharide biosynthesis protein Swit_2378 2643134 - 2644879 + | GMC oxidoreductase Swit_2379 2646391 - 2644886 - | hypothetical protein Swit_2380 2646488 - 2647066 + | scaffold protein Nfu/NifU-like protein Swit_2381 2647105 - 2647710 + | hypothetical protein Swit_2382 2647717 - 2648331 + | peptidase M22, glycoprotease TERM 1276 2648718 - 2648696 - g 84 -4.9 -5.04175 | gap 2, opp_overlap 2648708 CGAACTATATAAAAA GGCCGGATTCG AGC CGA-T-CGGCC GCCGTCCCGCTTATT Swit_2383 2648328 - 2648789 + | ribosomal-protein-alanine acetyltransferase Swit_2384 2648921 - 2649334 + | MucR family transcriptional regulator TERM 1277 2649377 - 2649346 - f 70 -10.2 -3.65542 | gap 2, opp_overlap 2649346 2649347, overlap 2649344 2649347 2649349 CTGATCGCGAAAACA GGACCGGGGAGCGG GAAAAT CC-CTCCCCGG-CC GTTTCCGGTCGAACC Swit_2385 2649447 - 2649869 + | ferric uptake regulator family protein Swit_2386 2649877 - 2650602 + | phospholipid/glycerol acyltransferase Swit_2387 2650635 - 2651996 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1278 2652029 - 2652001 - f 100 -13.1 -4.56775 | overlap 2652002 AGGCCGCCTGAAAAA TCCTCCCTATCGC GCA GCGATGGGGAGGG GGACCATGCGCAGCA TERM 1279 2652028 - 2652002 - f 88 -16.6 -3.33744 | overlap 2652001 GGCCGCCTGAAAAAT CCTCCCTATCGC GCA GCGATGGGGAGG GGGACCATGCGCAGC TERM 1280 2652170 - 2652197 + F 81 -7.6 -4.43012 | opp_overlap 2652159 CCAACTGCCACATCG GCGGTGGATAAG TATG CCGGTCCACCGC TTTTGCTCTTCGCAT Swit_2388 2652211 - 2653293 + | PhoH family protein Swit_2389 2653290 - 2653799 + | hypothetical protein Swit_2390 2655453 - 2653813 - | GMC oxidoreductase TERM 1281 2655552 - 2655562 + H 77 -2.4 -5.00616 | overlap 2655550 2655549 GATCTTTATTCCTTC GCCC GGC GGGA TTTTTTCCCCGGACG TERM 1282 2656321 - 2656281 - g 82 -15.3 -3.48036 | opp_overlap 2656291 2656317 CATGACGAGAAGGAA GCCGACCTGCTCGTGCCGC TCG ACGACGCGATCTGGTCGGC CGACGCCCGCGCCGA Swit_2391 2655594 - 2656562 + | CBS domain-containing protein TERM 1283 2657018 - 2656982 - g 74 -13.6 -3.2794 | gap 1, opp_overlap 2656972, overlap 2657006 GGTCAGCGAGAGCAA CTCGCCGCCGCGCGACG CGGA CAACG-GCGGCGGCGGG ATCACCGGCTTCGTG Swit_2392 2656665 - 2658011 + | glucose/sorbosone dehydrogenase-like protein Swit_2393 2658919 - 2658119 - | arginyl-tRNA-protein transferase TERM 1284 2659241 - 2659276 + r 100 -23.4 -3.20901 | opp_overlap 2659243, overlap 2659243 GAGGCCAAACAAACA AACCGTGGAAGCCGGC TTCA GCCGGCTTCCACGGTC TTCACTTCATAGCCT TERM 1285 2659243 - 2659274 + r 100 -26 -3.16676 | opp_overlap 2659243, overlap 2659241 GGCCAAACAAACAAA CCGTGGAAGCCGGC TTCA GCCGGCTTCCACGG TCTTCACTTCATAGC TERM 1286 2659274 - 2659243 - R 100 -26 -4.78326 | opp_overlap 2659243 2659241 GGCCAAACAAACAAA CCGTGGAAGCCGGC TTCA GCCGGCTTCCACGG TCTTCACTTCATAGC Swit_2394 2660505 - 2659258 - | threonine dehydratase TERM 1287 2661129 - 2661106 - g 72 -15.4 -2.90901 | AGATGGTCAACCAGA TCTGCATCGC CGGC GCGATGCAGA GCGCGGCCGAGGCGC Swit_2395 2660577 - 2661446 + | 6-phosphogluconate dehydrogenase, NAD-binding Swit_2396 2661577 - 2663274 + | amidohydrolase 3 Swit_2397 2663249 - 2664994 + | type I phosphodiesterase/nucleotide pyrophosphatase Swit_2398 2666002 - 2664998 - | hypothetical protein Swit_2399 2668765 - 2666057 - | methionine synthase (B12-dependent) TERM 1288 2668704 - 2668726 + g 90 -12.7 -4.43859 | gap 1 CCCGCTTGCGGGAGG GGCCGGG-GG TGGG CCGCCCGGCC TTTTCTAGCGTTGTC Swit_2400 2669864 - 2668803 - | methionine synthase (B12-dependent) Swit_2401 2670805 - 2669861 - | 5,10-methylenetetrahydrofolate reductase Swit_2402 2671773 - 2670802 - | ArsR family transcriptional regulator TERM 1289 2671836 - 2671855 + H 70 -10.6 -3.55444 | CGGGGCATGCGGTTG CGGCGCGG ACTT CCGCGGCG TTTCAGGAGTAGACC Swit_2403 2671908 - 2672855 + | VacJ family lipoprotein Swit_2404 2672995 - 2673192 + | hypothetical protein TERM 1290 2673252 - 2673275 + T 100 -21 -4.99056 | ACATGCGATTCGGAA GGCCGCGCCC CACC GGGCGCGGCC TTTTTCGTTGTCTTC Swit_2405 2674092 - 2673304 - | phosphoesterase, PA-phosphatase related Swit_2406 2674919 - 2674134 - | ATPase involved in chromosome partitioning-like protein Swit_2407 2676721 - 2674916 - | lipopolysaccharide biosynthesis protein TERM 1291 2677359 - 2677379 + r 76 -11.1 -3.71873 | TCTCCGACTGGCGGA CCAGCTTCG GGG CGATGCTGG TTTCGATATAGGTGG Swit_2408 2678201 - 2677566 - | polysaccharide export protein TERM 1292 2678457 - 2678489 + r 80 -14.7 -3.24925 | overlap 2678463 TACCACTTCGGCTTT CGCCGCCGGTCCGGG CCG CGCGGGCCGGTGCCG TTCGTGGTCTGGACT Swit_2409 2679070 - 2678792 - | histone family protein DNA-binding protein Swit_2410 2679235 - 2680047 + | IS4 family transposase Swit_2411 2680240 - 2680605 + | cytochrome c, class I TERM 1293 2680663 - 2680606 - T 81 -12.1 -3.90744 | gap 4, opp_overlap 2680654, overlap 2680607 CTGTCGCTGAAATAA GGGTTCAGCG-CCCGCCCGCTG--CGATC AGGC GATCGAACAGCGGGCGGGCCGCCGC-CTC GATCGGGGCTCCGGT TERM 1294 2680661 - 2680607 - T 70 -13.1 -2.94232 | gap 5, opp_overlap 2680654, overlap 2680606 TGTCGCTGAAATAAG GGTTCAGCG-CCCGCCCGCTG--CGATC AGGC GATCGAACAGCGGGCGGGCCGCCG--CC TCGATCGGGGCTCCG Swit_2412 2681611 - 2680610 - | hypothetical protein TERM 1295 2680823 - 2680787 - G 75 -4.5 -4.59773 | gap 3, overlap 2680788 2680789 GTCGATCCCGAAAAA GTCGA-GCG-GC-ATCCG CGCC CGGATCGCGCGCATCGCC GACCGCGCCGGTTCG Swit_2413 2682180 - 2681701 - | AsnC family transcriptional regulator Swit_2414 2682418 - 2683902 + | peptidase S10, serine carboxypeptidase Swit_2415 2683920 - 2684888 + | ornithine cyclodeaminase Swit_2416 2684885 - 2686993 + | amidohydrolase TERM 1296 2688414 - 2688455 + G 70 -8.5 -3.85698 | gap 1 CACGGCCCCTATCTG GGGGCCGAGG-CGCGCACCG CGC TGGCCCGCGACCTCCGCGCC TTTATGAGCGCGCCC Swit_2417 2686983 - 2688476 + | peptidase S10, serine carboxypeptidase Swit_2418 2688473 - 2689807 + | amino acid permease-associated region Swit_2419 2689888 - 2691078 + | aminotransferase TERM 1297 2691236 - 2691215 - f 83 -7.2 -4.56597 | TCCGGCCTCGAAAAA GGGGGCTC GACGGG GAGCACCC CCTGGGCCGGAGGAA TERM 1298 2691298 - 2691261 - f 70 -10.6 -3.67517 | overlap 2691262 GAGGAAGAGGTCAAA CCGGATGGACCGC-CCGC GCGG GCGGAGCGGAC-ATCCGA CAGGTTCAGTGGAGA Swit_2420 2691265 - 2693598 + | TonB-dependent receptor TERM 1299 2693635 - 2693663 + F 100 -20.4 -4.53705 | TGGCCTGAACTGCGA GATGCGCAGGGC CCCAC GCCCTGCGCATC TTTTGTATGGACATT Swit_2421 2693694 - 2695493 + | peptidase M61 domain-containing protein Swit_2422 2695770 - 2695504 - | transglycosylase-associated protein Swit_2423 2695946 - 2696191 + | hypothetical protein Swit_2424 2696246 - 2696533 + | plasmid maintenance system killer Swit_2425 2696533 - 2696832 + | XRE family plasmid maintenance system antidote protein Swit_2426 2697099 - 2697842 + | RNA methyltransferase TERM 1300 2697887 - 2697904 + F 75 -14.1 -3.06796 | CCTCAGGCGCCGGGC GCCGGGC CTCC GCCCGGC TTGGCTAACCTCGCA TERM 1301 2698110 - 2698089 - g 100 -15.9 -5.64421 | AGGCCAAACAAAAAA GGATCGGGC CTCG GCCCGATCC CAGCAGCTCAATCTT Swit_2427 2698055 - 2699161 + | HhH-GPD family protein TERM 1302 2699164 - 2699189 + T 73 -8.9 -4.09685 | opp_overlap 2699165 2699166, overlap 2699165 GATGCCGCTCTGACA ATCCCTCTCCC CGAG GGGAGAGGGCG TTTTAGCCCCTGAGC TERM 1303 2699188 - 2699165 - T 72 -12.4 -3.28791 | opp_overlap 2699164 2699165, overlap 2699166 ATGCCGCTCTGACAA TCCCTCTCCC CGAG GGGAGAGGGC GTTTTAGCCCCTGAG TERM 1304 2699187 - 2699166 - T 77 -15.9 -2.57132 | opp_overlap 2699165 2699164, overlap 2699165 TGCCGCTCTGACAAT CCCTCTCCC CGAG GGGAGAGGG CGTTTTAGCCCCTGA pheT 2701570 - 2699192 - | phenylalanyl-tRNA synthetase subunit beta Swit_2429 2702649 - 2701567 - | phenylalanyl-tRNA synthetase, alpha subunit Swit_2430 2703074 - 2702766 - | excinuclease ABC subunit C TERM 1305 2703245 - 2703206 - R 100 -20.8 -4.19276 | opp_overlap 2703206 2703208 2703211, overlap 2703212 CGAAAACGCCGAAAA CAAAAAGGGCGCGGTGAC CATG GCCACCGCGCCCCTCCTG TCTGGTGTCCGAAGA TERM 1306 2703211 - 2703240 + r 75 -14.9 -2.7224 | opp_overlap 2703206 2703212, overlap 2703208 2703206 ACGCCGAAAACAAAA AGGGCGCGGTGAC CATG GCCACCGCGCCCC TCCTGTCTGGTGTCC TERM 1307 2703239 - 2703212 - R 100 -20.6 -5.45802 | opp_overlap 2703211 2703208 2703206, overlap 2703206 CGCCGAAAACAAAAA GGGCGCGGTGAC CATG GCCACCGCGCCC CTCCTGTCTGGTGTC rplT 2703639 - 2703262 - | 50S ribosomal protein L20 rpmI 2703857 - 2703654 - | 50S ribosomal protein L35 TERM 1308 2703810 - 2703822 + g 72 -3.3 -4.57073 | CTTGCCGGTGGCCGT GAGCT TGA AGCGC TTTTTGACGCCGCTC TERM 1309 2704105 - 2704077 - g 87 -17.3 -3.28712 | GGGGGCTTCCGACAA CGCTCCGCAGCCG GCC CGGCAGCGGCGCG ATCCCGCCAACTGGA Swit_2433 2704024 - 2706156 + | AsmA family protein Swit_2434 2707027 - 2706263 - | histidinol-phosphate phosphatase, putative Swit_2435 2707084 - 2707506 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_2436 2707989 - 2707516 - | integral membrane-like protein Swit_2437 2709281 - 2707986 - | NAD-dependent epimerase/dehydratase TERM 1310 2709000 - 2708962 - G 88 -14.5 -3.75461 | gap 1, opp_overlap 2708967 2708989 GAAATCTGGACGAAA CGCGC-GATCCCGGCCGC TTCT GCCGCCGCGACCAGCGCG ATGATGGCATCGGCC Swit_2438 2710221 - 2709286 - | ribose-phosphate pyrophosphokinase TERM 1311 2711418 - 2711456 + G 75 -16.7 -2.87132 | gap 1 TGGGCGGTGGTCGAG GGCGCGGT-GTCGGCCGC AATC GCGCCCGAGGACCGCGCC TATCTGGCGCAGGCG gltX 2710353 - 2711684 + | glutamyl-tRNA synthetase TERM 1312 2711751 - 2711778 + T 71 -11.2 -3.53012 | TCTTCTCCCCTCTCC CGAGATCCCGGC CCTC GCCGGGATGACG TTTGAGAGGGGAGCC Swit_2440 2711994 - 2711794 - | phage shock protein C, PspC Swit_2441 2712485 - 2713117 + | TonB family protein TERM 1313 2713116 - 2713168 + F 79 -15.6 -2.87211 | gap 3, opp_overlap 2713114 TCACCCTCAAGGACT GAGGCCCGCACCGGCCCGCCGCGCC CGGGCT GGCGCGGCGGGCCT-T-CG-GCCAC TATCTAGGCGGCCAT TERM 1314 2713295 - 2713316 + G 70 -12.3 -3.3785 | GGTGTCGGTGCTGAT GCCGGTGAT CATC GTCACCGGC TTCTACGTCGATTCG Swit_2442 2713182 - 2713523 + | hypothetical protein TERM 1315 2714272 - 2714295 + G 80 -16 -3.14132 | gap 1 CATCTGTTCGTCGAG GGCGG-GGCGG GCG CCGCCGCCGCC TTCCTCGCCGCCGAC Swit_2443 2713537 - 2714478 + | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase Swit_2444 2714480 - 2715097 + | riboflavin synthase subunit alpha Swit_2445 2715158 - 2716429 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase Swit_2446 2716441 - 2716863 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 1316 2716889 - 2716941 + T 75 -12.1 -3.53811 | opp_overlap 2716873 2716872 2716889 2716926 2716929 2716931 2716933 2716935, overlap 2716930 GTCATCCCGGCGAAA GCCGGGATCTCACTGCCTTTC CGCACCCGAAC GAAAAGAAGAGAGATCCCGGC TTTCGCCGGGATGAC TERM 1317 2716941 - 2716889 - T 91 -16.5 -3.53811 | gap 1, opp_overlap 2716889 2716930, overlap 2716873 2716872 2716926 2716929 2716931 2716933 2716935 GTCATCCCGGCGAAA GCCGGGATCTCACTGCCTTTCCGC ACCCGA ACGAAAAGA-AGAGAGATCCCGGC TTTCGCCGGGATGAC TERM 1318 2716959 - 2716929 - T 71 -6.1 -4.32402 | gap 1, opp_overlap 2716889 2716930, overlap 2716889 2716926 2716931 2716933 2716935 CCCGAACGAAAAGAA GA-GAGATCCCGGC TTTC GCCGGGATGACGTC TTGGGGCCGCCCTAC TERM 1319 2716952 - 2716935 - T 74 -12.7 -3.26836 | opp_overlap 2716889 2716930, overlap 2716889 2716933 2716931 2716929 2716926 CGAAAAGAAGAGAGA TCCCGGC TTTC GCCGGGA TGACGTCTTGGGGCC Swit_2447 2718026 - 2716971 - | NADH:flavin oxidoreductase/NADH oxidase Swit_2448 2718083 - 2719018 + | hypothetical protein Swit_2449 2719015 - 2719677 + | rpsU-divergently transcribed protein Swit_2450 2719734 - 2720000 + | FeoA family protein TERM 1320 2720031 - 2720071 + G 74 -15.3 -3.09327 | opp_overlap 2720029 GAACCCCACACCATT GGTCGCGCTGGCCGGCAAT CCC AATGCCGGCAAGAGCGCCC TGTTCAATGCCCTGA Swit_2451 2720014 - 2721879 + | ferrous iron transport protein B Swit_2452 2722006 - 2722593 + | single-strand binding protein TERM 1321 2722805 - 2722839 + G 82 -15.6 -3.53012 | overlap 2722806 CACCGCGGCGGTGAG CCGCGCCGCGCGGC TGCCGGC GCCGCGCGGCGAGC TTTCGGCAGCCGAGA TERM 1322 2722806 - 2722838 + G 81 -19.1 -2.71712 | overlap 2722805 ACCGCGGCGGTGAGC CGCGCCGCGCGGC TGCCGGC GCCGCGCGGCGAG CTTTCGGCAGCCGAG Swit_2453 2722734 - 2724275 + | capsule polysaccharide biosynthesis protein TERM 1323 2724572 - 2724541 - g 82 -15.8 -3.28712 | gap 1, opp_overlap 2724558 CCGCCCGCTCCACAA CGCCGCGC-GCGGCA TGG CGCGGCTGCGCGGCG TGCGCGTCCACGTCT Swit_2454 2724272 - 2725534 + | capsule polysaccharide biosynthesis protein Swit_2455 2726211 - 2725645 - | GCN5-related N-acetyltransferase TERM 1324 2726239 - 2726277 + r 100 -14.5 -4.27316 | opp_overlap 2726244, overlap 2726242 TCGGTCCAGGCAAAA GAAAAGGGGCGCGGAAG CAAGC CTTCCGCGCCCCGATCC TTTTCCGTTCGAACA TERM 1325 2726242 - 2726274 + r 80 -14.8 -3.13906 | opp_overlap 2726244, overlap 2726239 GTCCAGGCAAAAGAA AAGGGGCGCGGAAG CAAGC CTTCCGCGCCCCGA TCCTTTTCCGTTCGA TERM 1326 2726272 - 2726244 - R 100 -21.8 -5.10933 | opp_overlap 2726242 2726239 CCAGGCAAAAGAAAA GGGGCGCGGAAG CAAGC CTTCCGCGCCCC GATCCTTTTCCGTTC rpsA 2728005 - 2726296 - | 30S ribosomal protein S1 TERM 1327 2728083 - 2728067 - R 76 -8.7 -4.11216 | opp_overlap 2728067 TCCGGAGGTCTAAAA GCCCGAT CGG ATCAGGC TTTCATCGGGATTTG TERM 1328 2728272 - 2728228 - R 100 -18.5 -4.61566 | opp_overlap 2728268 CCCGAAAGCATAAAA GGCACGGCAAAGGATCGGCTG TTG CTGCCGACCCCCTGTCGCGCC TGCTGGCGATCGCTT Swit_2457 2728915 - 2728289 - | cytidylate kinase Swit_2458 2730351 - 2728912 - | 3-phosphoshikimate 1-carboxyvinyltransferase Swit_2459 2730375 - 2730695 + | hypothetical protein TERM 1329 2730700 - 2730738 + F 84 -13.9 -3.72576 | gap 1, opp_overlap 2730693 2730692 ACGAGAATTGACCGG GCCCGCCGGAATGCC-CA GCGA TGCGGCATTCCGGCGCCC TTTCATCGAAAAAGC TERM 1330 2730786 - 2730770 - f 72 -7.9 -4.18018 | GTCCGTCATGCAAAA GGGCTCT TGC AGGGCCC CGCAACCTGACCTAA TERM 1331 2730974 - 2730941 - f 70 -7.5 -4.0371 | CATTTTCCACAGAAA GCCCGGATTTCCT GAAAAGCT AGGAAATACAGGC CCTGCTCTAGCCGAA TERM 1332 2731197 - 2731207 + G 91 -8.2 -4.87665 | opp_overlap 2731197 2731198, overlap 2731182 2731182 GGATGCGCGGGAGAA GGCG CAT CGCC TTTTTGTCAATCCGC TERM 1333 2731609 - 2731619 + G 72 -3.2 -4.66609 | ATCGAACGGGCCCGA TTGC ATG GCGA TTTTTCGGTAACGTC Swit_2460 2731027 - 2732808 + | phage integrase family protein Swit_2461 2734189 - 2733431 - | hypothetical protein Swit_2462 2734248 - 2735486 + | DNA-cytosine methyltransferase TERM 1334 2736513 - 2736530 + G 75 -8.3 -4.21141 | CAGGAGATGCTGTTC GACGCGC ATGC GCGCGGC TTTGCTTTCTTCGGC Swit_2463 2735985 - 2737490 + | integrase catalytic subunit Swit_2464 2737477 - 2738205 + | IstB ATP binding domain-containing protein Swit_2465 2738719 - 2738309 - | hypothetical protein Swit_2466 2740096 - 2739161 - | LysR family transcriptional regulator Swit_2467 2740816 - 2740100 - | dimethylmenaquinone methyltransferase Swit_2468 2740987 - 2741685 + | dimethylmenaquinone methyltransferase TERM 1335 2741697 - 2741723 + T 72 -13.6 -2.70932 | opp_overlap 2741665 CTGACCGGGCGGGGA CCGGGTCAGGCC AGC GGCAGGACCCGG TGCTTGCGGAGCGGA Swit_2469 2742508 - 2741702 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 1336 2742535 - 2742551 + r 83 -7.9 -4.58395 | opp_overlap 2742536, overlap 2742536 CCTTCGAAGTGATCA ACGGCGA TCG TCGCCGC TTTTTCGGAGATGGC Swit_2470 2743854 - 2742532 - | major facilitator transporter TERM 1337 2743183 - 2743142 - G 83 -12.1 -4.05747 | gap 1, opp_overlap 2743175, overlap 2743129 2743131 2743143 2743170 GACAGGCCATAGAAA GCCGGCCTGCGACGCAGGGC GGA GACCAGCGTCCC-GGCCGGG GCGCCTCCGGCGGCT TERM 1338 2743182 - 2743143 - G 74 -15.6 -3.02966 | gap 1, opp_overlap 2743175, overlap 2743129 2743131 2743142 2743170 ACAGGCCATAGAAAG CCGGCCTGCGACGCAGGGC GGA GACCAGCGTCCC-GGCCGG GGCGCCTCCGGCGGC TERM 1339 2743175 - 2743213 + g 74 -14.5 -3.05596 | gap 2, opp_overlap 2743131 2743143 2743142 2743170 GCGGAGACCAGCGTC CCGGCCGG-GGCGCC-TCC GGC GGCTGGCGCCGCCGTCCGG TTCAATCGCAGGCTC Swit_2471 2746067 - 2743869 - | TonB-dependent receptor Swit_2472 2746613 - 2746233 - | hypothetical protein Swit_2473 2747120 - 2746635 - | hypothetical protein TERM 1340 2747031 - 2747088 + g 79 -15.5 -3.26471 | gap 1 CCGGTCGCCATGCCG CTGGC-GGCGCACCTCCTGCACCTTGAC GCT GTCGAGATGCGTGAAGCGCGCCCGCCGG TTGATGTCGGGATCC TERM 1341 2747261 - 2747238 - R 100 -17.4 -4.77036 | opp_overlap 2747238 CGCGACGACGAAAAA GGGGACGCGG TCGC CCGCGCCCCC TTTCCTTTTCCGTCG TERM 1342 2747238 - 2747261 + r 100 -15.2 -4.21922 | opp_overlap 2747238 CGCGACGACGAAAAA GGGGACGCGG TCGC CCGCGCCCCC TTTCCTTTTCCGTCG Swit_2474 2749769 - 2747289 - | hypothetical protein TERM 1343 2747961 - 2748000 + g 74 -10.7 -3.72324 | gap 1, overlap 2747964 GTAATGGCGCGGGTT CGCCGCGTCGGTGCCGTC GAGCG GACGG-ACCGAGGCGCTG TTGTTGGTGAGCGTC Swit_2475 2750522 - 2749896 - | electron transport protein SCO1/SenC Swit_2476 2750982 - 2750512 - | hypothetical protein Swit_2477 2753084 - 2751039 - | TonB-dependent receptor TERM 1344 2753121 - 2753092 - R 79 -13.5 -3.41569 | overlap 2753090 CGATTCATGGAAATA GGCCTCGATCGGG CGCG CCCGATCGCGGGC CGCCCATGGACAGAT TERM 1345 2753163 - 2753136 - R 70 -12.7 -2.91264 | overlap 2753139 CCGCCCATGGACAGA TCACCGGCCGC GCGGAG GCGGCCGGTCA GCTCCGGATCAGAGG TERM 1346 2753160 - 2753139 - R 75 -14.4 -2.7035 | overlap 2753136 CCCATGGACAGATCA CCGGCCGC GCGGAG GCGGCCGG TCAGCTCCGGATCAG Swit_2478 2753573 - 2753172 - | hypothetical protein Swit_2479 2753662 - 2753976 + | hypothetical protein Swit_2480 2754110 - 2754763 + | hypothetical protein Swit_2481 2754760 - 2755701 + | hypothetical protein Swit_2482 2755816 - 2756811 + | hypothetical protein Swit_2483 2758043 - 2756964 - | alpha/beta hydrolase fold TERM 1347 2757948 - 2757930 - G 86 -13.2 -3.85698 | GGCGCTCGGGATAAA CTTCAGCC AAA GGCTGAAG GCCGGGATCTCGGGG Swit_2484 2758084 - 2759079 + | bile acid:sodium symporter Swit_2485 2759145 - 2760164 + | adenosine deaminase Swit_2486 2760182 - 2760694 + | phosphoribosyltransferase TERM 1348 2760840 - 2760857 + F 73 -11.3 -3.58726 | overlap 2760834 2760835 CCCCGTGACCGTGGA TTCCCGC TTTC GCGGGAA TTGTCTCTCGGGAAA TERM 1349 2760927 - 2760904 - f 86 -18.2 -2.62184 | TGGCTGGCGAGACGA GCTGCGGGGT GGCC ACCCCGCAGC TCGTGGCGGCAAGGC Swit_2487 2761075 - 2762031 + | transposase IS116/IS110/IS902 family protein Swit_2488 2763651 - 2762047 - | ABC transporter related TERM 1350 2763223 - 2763195 - G 74 -14.5 -3.01712 | overlap 2763178 CGGGCTCCGCGAACA GCGCCGCCGCG ATCGCCG CGCGGCTGCGC TGGCCGCCCGACAGC Swit_2489 2763938 - 2764621 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1351 2764869 - 2764847 - g 75 -10.4 -4.00445 | opp_overlap 2764846, overlap 2764844 CATGATGAAGAAGAA GGCGGGCCGG CGT CCGGCCATCC ATATGATCGATTCCG Swit_2490 2764746 - 2765246 + | GreA/GreB family elongation factor TERM 1352 2766189 - 2766135 - g 74 -16.5 -2.73994 | opp_overlap 2766133 2766139, overlap 2766132 ATGTGCCCAACACCA TCC-TCACCCCCCACACCAGCGGCGCC ACC GACGCGGC-GGTGCGGCGGATGAAGGA GATGTTGCTCGCCAA Swit_2491 2765324 - 2766253 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Swit_2492 2767772 - 2766258 - | malonyl-CoA synthase Swit_2493 2769123 - 2767813 - | polysaccharide biosynthesis protein Swit_2494 2770244 - 2769120 - | glycosyl transferase, group 1 TERM 1353 2770020 - 2769986 - G 77 -17 -2.64616 | TGCCCATCGACAGCA GCACCGCCGGCGGCTG GTG CCGCAGCCAGCGGCGC AGCGGCTGCGCGGCG TERM 1354 2770762 - 2770727 - g 72 -5.8 -4.36914 | CGCTCGCCGACAAAA GCCGCTTCGCCGAGCG CTGC CGCGCGGCCGGGCTGC CCTGCCCCGAGACGG TERM 1355 2771114 - 2771168 + G 85 -16.5 -3.63627 | opp_overlap 2771113 2771112 TCGACAATATGAAGG CGGGCG-GGCTGATCGTGCCGGTCG CGCTGGC CGAC-GGCGCGCTCGGCCGCGCCTG TTTCGGCTATGGCGG Swit_2495 2770321 - 2771463 + | hypothetical protein TERM 1356 2771826 - 2771868 + G 80 -17.1 -2.87132 | overlap 2771807 CGGCTTCCTCAATTC GGAGATGCTGCTGCCGCT-GC TCT GCGAGCGGC-GCGGCATCCCC TATCTCGGCGCCAGC Swit_2496 2771563 - 2772597 + | phosphoribosylglycinamide synthetase Swit_2497 2772584 - 2773426 + | nucleotidyl transferase Swit_2498 2774694 - 2773423 - | FAD dependent oxidoreductase Swit_2499 2775074 - 2774691 - | endoribonuclease L-PSP Swit_2500 2777275 - 2775074 - | TonB-dependent receptor TERM 1357 2775899 - 2775881 - G 70 -12.4 -3.30124 | CTGGAGCCGCGAGAA GGTCGCCG TGT CGACGACC CCGGCAGCCCTGTCG Swit_2501 2777760 - 2777323 - | hypothetical protein Swit_2502 2778785 - 2777787 - | Rieske (2Fe-2S) domain-containing protein TERM 1358 2778044 - 2778018 - G 71 -11.4 -3.63515 | overlap 2778020 CGCCACCGCGAAGAA GAGCCGCGACCG GCC CGGCCGCGGCAG GCCCATCGGCGCGAC TERM 1359 2778042 - 2778020 - G 93 -18.4 -3.39784 | overlap 2778018 CCACCGCGAAGAAGA GCCGCGACCG GCC CGGCCGCGGC AGGCCCATCGGCGCG Swit_2503 2778967 - 2779488 + | AsnC family transcriptional regulator Swit_2504 2779519 - 2779962 + | hypothetical protein Swit_2505 2779962 - 2780732 + | hydroxyacylglutathione hydrolase Swit_2506 2782144 - 2780756 - | hypothetical protein Swit_2507 2784676 - 2782148 - | TonB-dependent receptor TERM 1360 2782202 - 2782181 - G 76 -2.9 -4.77165 | gap 1, overlap 2782182 2782183 GCGCCCATAATAAAA GCCG-CCGCT GAG ACCGAACGGC GCGAAATTGCCATAG Swit_2508 2785735 - 2784779 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 1361 2785522 - 2785488 - G 70 -9.2 -3.93038 | gap 1, overlap 2785483 TAGGCGAAGATGAAA GGCGC-GTCGCCGAC CACCCC GACGTCGACCGCGCC GCCGCCGATCGCCTC Swit_2509 2786826 - 2785732 - | alkanesulfonate monooxygenase Swit_2510 2787663 - 2786878 - | ABC transporter related Swit_2511 2788467 - 2787667 - | binding-protein-dependent transport systems inner membrane component TERM 1362 2788506 - 2788488 - H 73 -8.2 -4.07885 | opp_overlap 2788488 CAGCCTCGGCCAAAA CTCTATCG ATT CAATAGAG TTTAGCTGCTAAGAC TERM 1363 2789253 - 2789204 - g 90 -13.4 -4.07568 | gap 1 GGCCGTGCTCGAAAA GCCCTGCCGCTTC-CGCGAGGCG GCGAT CGCCGCGCTCGACGCGGCGGGAC GGCCGTGGCGGATCG Swit_2512 2788653 - 2789489 + | LysR family transcriptional regulator Swit_2513 2790630 - 2789506 - | diguanylate cyclase Swit_2514 2790759 - 2791883 + | aminotransferase TERM 1364 2791987 - 2791942 - T 72 -7.8 -4.20868 | gap 3, overlap 2791943 GCGGTAAAACAACAA TCTAGAGCGG--C-CGATCCGAT GCA ATCGGATCGTGAACCGCTCTAAG GCGGGGCCTATCGCT Swit_2515 2792861 - 2791995 - | regulatory protein, TetR TERM 1365 2793078 - 2793116 + G 78 -13.8 -3.53811 | gap 1 GCCCGTCGCGGGCGA TGCCGCGCGCCCCGTCG CCGATC CGCC-GGGCGCGCAGCA TTTCGCCGGGATCAC Swit_2516 2792968 - 2795328 + | sulfatase TERM 1366 2795906 - 2795850 - g 70 -12.1 -3.38812 | overlap 2795848 2795853 2795881 TGTTCGGCAAGAACA CCACCGGCGGCGTCGTGGT-GGCGCGC ACCAA GCGCCCCGACCTCGGCGCCTTCGG-GG CGCAGCTGCGGGGCG Swit_2517 2795369 - 2797798 + | TonB-dependent receptor TERM 1367 2797818 - 2797839 + F 100 -18.7 -5.00884 | opp_overlap 2797807 ATAAGCCTCCGACCT GGCCCCGGC GCGA GCCGGGGCC TTTTTTCGCGGAGAT TERM 1368 2799645 - 2799608 - g 76 -13.3 -3.44527 | opp_overlap 2799638 GATCCACGACTATAA GCTCGGCGCCGAGGGCC GGCC GACGCTCAACGCCGGGC GCGACGTCTTCACCT Swit_2518 2797860 - 2800157 + | sulfatase Swit_2519 2800595 - 2800158 - | hypothetical protein Swit_2520 2800951 - 2800595 - | hypothetical protein TERM 1369 2800885 - 2800931 + g 71 -10.1 -3.79906 | opp_overlap 2800877 CGAGATAGGCGTCGA CGTCGCCGCTG-CCGATCGCGTC CCA GAAGCGG-CGGACGGTGGCGAGG TTCTTCTCGGGGTCG Swit_2521 2801993 - 2800962 - | Rieske (2Fe-2S) domain-containing protein Swit_2522 2804107 - 2802005 - | TonB-dependent receptor TERM 1370 2804243 - 2804216 - R 81 -2.6 -5.12068 | overlap 2804232 CACAGTCAACAAAAA GGGGGATGCC GAGATAGG GGGATACCCC CCGGCGACGGTCAGA Swit_2523 2806893 - 2804254 - | regulatory protein, LuxR TERM 1371 2805023 - 2805057 + g 72 -14.3 -3.14344 | opp_overlap 2805001 AGGCGCGGCAGGTTG CG-CTCGCGCGCCAGCG CCT CGCCGGCGCG-GAGCCG TTCCTCGGCCGCGTC Swit_2524 2807733 - 2807029 - | ThiJ/PfpI domain-containing protein Swit_2525 2807815 - 2808378 + | hypothetical protein TERM 1372 2808421 - 2808446 + T 84 -16.9 -2.73275 | overlap 2808418 CCGGAACGATTTTAG CCCCGCGAGAC TGCT GTCTTGCGGGG TGGTGTATGTGGGTG TERM 1373 2812220 - 2812235 + T 79 -9 -4.15565 | GCCAGCTCAGGCGCA CAGACC CGAG GGTCTG TTTTCCAGTGATGAA TERM 1374 2814274 - 2814250 - T 72 -12.1 -3.3782 | overlap 2814232 2814251 GAGGCACCGAATCAA CCCCGCCGC GATTCGG GCGGCGGGA ATCACGCCGCCCGAC TERM 1375 2814273 - 2814251 - T 71 -13.4 -2.62371 | overlap 2814232 2814250 AGGCACCGAATCAAC CCCGCCGC GATTCGG GCGGCGGG AATCACGCCGCCCGA Swit_2526 2814818 - 2814387 - | signal-transduction protein Swit_2527 2814915 - 2815277 + | hypothetical protein TERM 1376 2815297 - 2815326 + T 100 -12.1 -4.57837 | opp_overlap 2815302 CCCCGGGGCCGAACG CAAAAGGGCGACC CGAA GGCCGCCCTTTCG TTTTTCCAGCCATAT TERM 1377 2815321 - 2815302 - T 95 -12.8 -4.27316 | opp_overlap 2815297 GGGCCGAACGCAAAA GGGCGACC CGAA GGCCGCCC TTTCGTTTTTCCAGC Swit_2528 2816173 - 2815364 - | hypothetical protein Swit_2529 2817292 - 2816468 - | HemK family modification methylase TERM 1378 2817030 - 2816979 - G 73 -13.1 -3.53012 | gap 3 CCCTTCGCGCCGAAA TGCCCGA-CCGCCGCCTCGATCAGCG TCT CGCTG-TCGGGGCGGGGGATCAG-CA CGCCGGGGCCGACCT Swit_2530 2818367 - 2817285 - | peptide chain release factor 1 Swit_2531 2819619 - 2818372 - | histidyl-tRNA synthetase Swit_2532 2819830 - 2820369 + | inorganic diphosphatase TERM 1379 2820406 - 2820458 + F 73 -11.3 -3.53811 | opp_overlap 2820406 2820447 2820450 GTCATTCCAGCGAAA GCTGGAATCTCACTACCTTTTCGAT AGC GTCGACAGAGAAGTGAGATCCCGGC TTTCGCCGGGATGAC TERM 1380 2820458 - 2820406 - f 70 -10.6 -3.65902 | opp_overlap 2820406, overlap 2820447 2820450 GTCATTCCAGCGAAA GCTGGAATCTCACTACCTTTTCGA TAGCG TCGACAGAGAAGTGAGATCCCGGC TTTCGCCGGGATGAC Swit_2533 2820539 - 2821795 + | major facilitator transporter TERM 1381 2821948 - 2821932 - f 81 -4.4 -5.03314 | gap 1 CCGAGGCCGAAAAAA CGACCGG ATCT CCG-TCG GGGAGTAGCTCAGCC Swit_2534 2822063 - 2823343 + | HNH endonuclease TERM 1382 2823391 - 2823364 - g 71 -11.3 -3.57144 | opp_overlap 2823365, overlap 2823365 2823385 TCCTCCAGTTCGAAA CGCCGCATCTG ATCGAG CAGATGCGGCT ACTTAAGAAGGTAGC TERM 1383 2823365 - 2823390 + G 70 -14.8 -2.71364 | opp_overlap 2823364 2823365 2823385 CCTCCAGTTCGAAAC GCCGCATCTG ATCGAG CAGATGCGGC TACTTAAGAAGGTAG TERM 1384 2823390 - 2823365 - g 70 -14.8 -2.74144 | opp_overlap 2823365, overlap 2823364 2823385 CCTCCAGTTCGAAAC GCCGCATCTG ATCGAG CAGATGCGGC TACTTAAGAAGGTAG TERM 1385 2823537 - 2823563 + G 78 -6.5 -4.57569 | gap 1 GGAGATATCTCGAGC GC-GGCCACCGG CATA CCGCTGGTCAGC TTTTTCACCGGATGC TERM 1386 2823766 - 2823780 + G 72 -4.2 -4.59773 | opp_overlap 2823768, overlap 2823768 GGACCGTGATTAAGG CACCTT TTG AAGGCG TTTTTGCCGGTGGGC Swit_2535 2823336 - 2824538 + | DNA-cytosine methyltransferase Swit_2536 2824960 - 2824535 - | T/G mismatch-specific endonuclease TERM 1387 2825071 - 2825055 - R 81 -4.4 -5.03314 | gap 1 CCGAGGCCGAAAAAA CGACCGG ATCT CCG-TCG GGGAGTAGCTCAGCC Swit_2537 2825849 - 2825175 - | manganese and iron superoxide dismutase Swit_2538 2827260 - 2825863 - | chromate transporter Swit_2539 2828084 - 2827257 - | hypothetical protein Swit_2540 2828279 - 2828635 + | response regulator receiver protein TERM 1388 2828759 - 2828719 - T 95 -12.6 -4.35581 | gap 1, opp_overlap 2828714, overlap 2828723 2828724 GCAAAACACCCAAAA GGAATGGCCCCCGCTCC GGGGGCGG GGAGCGAGGGCC-TACC TAGCGTTCGTCACGC TERM 1389 2828756 - 2828723 - T 81 -13.1 -3.71279 | opp_overlap 2828714, overlap 2828719 2828724 AACACCCAAAAGGAA TGGCCCCCGCTCC GGGGGCGG GGAGCGAGGGCCT ACCTAGCGTTCGTCA TERM 1390 2828755 - 2828724 - T 81 -16.6 -2.81683 | opp_overlap 2828714, overlap 2828723 2828719 ACACCCAAAAGGAAT GGCCCCCGCTCC GGGGGCGG GGAGCGAGGGCC TACCTAGCGTTCGTC Swit_2541 2829507 - 2828884 - | outer membrane lipoprotein carrier protein LolA Swit_2542 2829608 - 2830063 + | hypothetical protein nadD 2830212 - 2830844 + | nicotinic acid mononucleotide adenylyltransferase Swit_2544 2830853 - 2831260 + | iojap-like protein TERM 1391 2831391 - 2831370 - g 74 -13.7 -3.26471 | CGACCGCTACATCAA GCGGATCGG CTGG CCGACCCGC ATCACCGAGCTGCCC Swit_2545 2831296 - 2831718 + | hypothetical protein TERM 1392 2831742 - 2831762 + G 100 -13.3 -4.51812 | GCCTTCCAAAATCCT TCCTCCCTG TTC CGGGGAGGA TTTATTATTGTAGCG TERM 1393 2832466 - 2832439 - g 84 -20 -2.92513 | overlap 2832428 AGAAGGCGAAGGACA TCGCCCAGCTCA TCGA TGAGCTGGGCGA GCAGTCCGACGTCCG Swit_2546 2831718 - 2832959 + | peptidase M23B Swit_2547 2833095 - 2834444 + | carboxyl-terminal protease Swit_2548 2834450 - 2835103 + | disulfide bond formation protein DsbB-like protein TERM 1394 2835255 - 2835301 + G 78 -16.6 -3.02144 | GCGATCGGCCGACGC CCGCGCGATCGCGCGCAT GGCGGACCAGG AGGCGCGCCATCGCGCGG TGTTCGACCGGATGA Swit_2549 2835166 - 2835657 + | ubiquinone biosynthesis protein COQ7 Swit_2550 2835687 - 2836085 + | hypothetical protein Swit_2551 2836169 - 2836552 + | hypothetical protein TERM 1395 2836928 - 2836888 - g 77 -15.3 -3.16191 | CGACACCTGGATCAA CCCGGCGATCGAGGCCGCC TAT GCCGACCTCCACCGCCGCG GCCACGCCCATTCGA aat 2836625 - 2837371 + | leucyl/phenylalanyl-tRNA--protein transferase Swit_2554 2838377 - 2837883 - | hypothetical protein Swit_2555 2838764 - 2838381 - | NADH dehydrogenase TERM 1396 2838779 - 2838804 + r 89 -14.7 -3.92602 | overlap 2838781 TGGCTGTCCGCTTAG CCCTTGCGCCC TAGA GGGCGCAAGTG TTTGTGGGGTGTTCG TERM 1397 2838781 - 2838802 + r 86 -15.9 -3.54848 | overlap 2838779 GCTGTCCGCTTAGCC CTTGCGCCC TAGA GGGCGCAAG TGTTTGTGGGGTGTT Swit_2556 2839417 - 2838941 - | hypothetical protein Swit_2557 2840016 - 2839420 - | cold-shock DNA-binding protein family protein Swit_2558 2840673 - 2840128 - | hypothetical protein TERM 1398 2840846 - 2840863 + G 70 -8.3 -3.95219 | GCCGACGCCGACAGC CGACGCG CTGC CGCGCCG TTTCTCCGATTTCGA Swit_2559 2840820 - 2842544 + | acyl-CoA synthetase Swit_2560 2842555 - 2843292 + | hypothetical protein TERM 1399 2843564 - 2843506 - f 79 -10.9 -3.85698 | gap 1, opp_overlap 2843506 GCTGGGGTCGAGAAA CGAGACGAGGTCA-GGTCCGCCGGCCGA AAGG CCGAAGAGCGGACCGCGGCCTCGTGTCG TTGTTTGCGTGGTTT Swit_2561 2843612 - 2843809 + | protein translocase subunit secE/sec61 gamma Swit_2562 2843831 - 2844370 + | transcription antitermination protein nusG rplK 2844585 - 2845016 + | 50S ribosomal protein L11 TERM 1400 2845143 - 2845119 - g 73 -12.1 -3.50853 | CCTCGCCAAGCAGAA CGCCACGTCGA AGT TCGACGAGACG ATCGAGGTCGCGCTG rplA 2845021 - 2845719 + | 50S ribosomal protein L1 TERM 1401 2845749 - 2845772 + F 100 -19.6 -4.72272 | opp_overlap 2845749 GACACGCCTTCGAAA GGGGCCGGGA GCGA TCCCGGCCCC TTTTTCGTGGCCCGC TERM 1402 2845772 - 2845749 - f 100 -19.6 -3.54129 | opp_overlap 2845749 GACACGCCTTCGAAA GGGGCCGGGA GCGA TCCCGGCCCC TTTTTCGTGGCCCGC TERM 1403 2845798 - 2845811 + F 84 -8.1 -4.46514 | CCCGCGTCCGGCCCG CCCGA CCTG TCGGG TTTCTTTACATCCCT TERM 1404 2846231 - 2846279 + F 100 -25.2 -3.32769 | overlap 2846227 2846228 2846276 TTTTGCGTGATGCGG CCCCCGCCCGCTCTTCCCCGCC CGCCC GGCGGAGATGGACGGGCGGGGG TTCGTCATTTCGGCG TERM 1405 2846471 - 2846453 - g 74 -14.6 -3.04263 | AGGGCATGCCCAAGA TCGCCCAG AAG CTGGGCGA GGAGGCGGTCGAGAC Swit_2565 2846347 - 2846667 + | phosphoribosyl-ATP pyrophosphatase Swit_2566 2846711 - 2847088 + | histidine triad (HIT) protein Swit_2567 2847211 - 2848734 + | amino acid permease-associated region TERM 1406 2848762 - 2848783 + T 100 -17.3 -4.55295 | opp_overlap 2848744 2848760 2848756 CAGGACCAATGGATC GAGCCCGGC GAAA GCCGGGCTC TTTCTTTGTCAGGGG Swit_2568 2849793 - 2848792 - | ribokinase-like domain-containing protein TERM 1407 2849860 - 2849814 - H 70 -9.9 -3.64703 | gap 1, opp_overlap 2849836 CGGCTCCTAGCGAAA GCC-GTCGCCGCCGCCAAGCGG TCCG CCGCCCGGCGCTTGCGCCCGGC CCGATATGATGCTGT Swit_2569 2849886 - 2850266 + | hypothetical protein Swit_2570 2850968 - 2850282 - | glutathione S-transferase domain-containing protein Swit_2571 2851602 - 2850949 - | deaminase-reductase domain-containing protein Swit_2572 2851675 - 2852184 + | HxlR family transcriptional regulator Swit_2573 2852212 - 2852916 + | 2OG-Fe(II) oxygenase Swit_2574 2853042 - 2854565 + | hypothetical protein TERM 1408 2854579 - 2854624 + F 72 -14 -2.71712 | opp_overlap 2854581 2854586, overlap 2854578 GACCGGCGCTTGAAC G-ACGATACGGGCGGCGGTCGC GGAA GCGCTCGCCGCCCGT-TCGCAC ATTTGAACGGGGACC TERM 1409 2854621 - 2854581 - f 87 -19 -2.70932 | gap 1, opp_overlap 2854579 2854578, overlap 2854586 CCGGCGCTTGAACGA CGATACGGGCGGCGGTCGC GGAA GCGCTCGCCGCCCGT-TCG CACATTTGAACGGGG TERM 1410 2854617 - 2854586 - f 91 -18.6 -2.86164 | opp_overlap 2854579 2854578, overlap 2854581 GCTTGAACGACGATA CGGGCGGCGGTCGC GGAA GCGCTCGCCGCCCG TTCGCACATTTGAAC Swit_2575 2854644 - 2857337 + | TonB-dependent receptor TERM 1411 2857364 - 2857399 + T 88 -14.6 -3.72893 | opp_overlap 2857367 CCGATCGGACGGCAG GAAGGGGGCGCGGGAC CGGG GTTCCGCGCCCTCGCC TTTGGTCAGGACATC TERM 1412 2857396 - 2857367 - T 80 -14.9 -3.16683 | opp_overlap 2857364 ATCGGACGGCAGGAA GGGGGCGCGGGAC CGGG GTTCCGCGCCCTC GCCTTTGGTCAGGAC Swit_2576 2858727 - 2857405 - | glycosidase, PH1107-related Swit_2577 2861047 - 2858744 - | glycosyl transferase, group 1 TERM 1413 2859498 - 2859448 - G 74 -15.3 -3.01712 | gap 1, opp_overlap 2859492, overlap 2859415 GCGCCTCGTCGAACA GCGCCGCCGCCCAGCCGCGCAG GCCGGGAT CGGCGCCAC-GGGCGGCGGCGG AGCCGAGCGCCCAAA TERM 1414 2859809 - 2859853 + g 80 -16.4 -3.14132 | gap 1 CGCGGCGAGGTGGAG CGGCGGGCGCGCCGGCCTG ACCGCGAG CGGGCCGGCGCG-CGGTCG TTCCTCGACGGCCGC Swit_2578 2862857 - 2861166 - | peptidase M28 Swit_2579 2863888 - 2862884 - | Type II secretory pathway component PulK-like protein Swit_2580 2864496 - 2863888 - | hypothetical protein TERM 1415 2864077 - 2864047 - G 74 -15.4 -3.01712 | GCCCGGCCGGTAATA GCTCCAGCGCACCG CCG CGACGCCCTGGAGC ATGCGCTGCGCCCCC Swit_2581 2865596 - 2864532 - | hypothetical protein TERM 1416 2865151 - 2865104 - G 78 -16.8 -3.01791 | ACGTCCCGCCGAACA CCGCGACCCGGCGCACCCCGCG CCCG CGCGCATAGCGCAGGATCGCGG TCACGCTCTGCCCGG Swit_2582 2866306 - 2865593 - | hypothetical protein Swit_2583 2867667 - 2866447 - | type II secretion system protein TERM 1417 2866840 - 2866858 + g 73 -13.1 -3.4072 | GAGGGTGGCGAGGCT CGCCGCG AAGCG CGCGGCG TTGTACTGGCGACTG Swit_2584 2869127 - 2867667 - | general secretory pathway protein E Swit_2585 2869630 - 2869124 - | general secretion pathway M protein TERM 1418 2869365 - 2869419 + g 71 -9.8 -3.76224 | gap 1 CTGCCGCCGGCCTGC GGCTGGGCGGGCGCCTG-GCCGAGC GGACCG GCGCTGCGCAGCCGCGCGCTCAGGC TTTCATAGGTGCGGA Swit_2586 2870837 - 2869749 - | general secretion pathway L Swit_2587 2870860 - 2871345 + | general secretion pathway protein G TERM 1419 2871721 - 2871759 + G 72 -14.5 -2.87683 | CCGGCGTCCCCGCGA CGATCGGCCTGCGGTCC GGCAA GGAGCGCTGGCTGGTCG TCTATGACGGGCTGT Swit_2588 2871345 - 2871806 + | general secretion pathway protein H TERM 1420 2872022 - 2871979 - g 70 -12.2 -3.28712 | gap 1 GCTCGTCGCGCAGAA CCGGCTCGCCGAGCTGG-CGG TGC CCGGCCTGCCCGCCGGCCCGG CGCAGGTCGAGATGC Swit_2589 2871803 - 2872204 + | general secretion pathway protein I Swit_2590 2872201 - 2873022 + | PDZ/DHR/GLGF domain-containing protein TERM 1421 2873931 - 2873900 - g 86 -18.6 -3.15544 | GGGGACCGTCACCAA CCCCGCCGCCCGCG CGGT CGCCGGCGGCCGGG CGCGGATCACCCGCC Swit_2591 2873034 - 2875082 + | general secretion pathway protein D Swit_2592 2875686 - 2875228 - | hypothetical protein TERM 1422 2875272 - 2875309 + g 72 -14 -3.14132 | opp_overlap 2875288 2875291 CCTCCGGCTCCGGCT CGGCCGCCGGCAGGAA GGACCG TACCCGCCGGCGGCCC TTGATGAACAGCGCC Swit_2593 2876168 - 2875686 - | hypothetical protein Swit_2594 2876854 - 2876171 - | hypothetical protein nadE 2878937 - 2876874 - | NAD synthetase Swit_2596 2880183 - 2879152 - | diguanylate cyclase Swit_2597 2880479 - 2880264 - | hypothetical protein Swit_2598 2881096 - 2880476 - | 5-formyltetrahydrofolate cyclo-ligase TERM 1423 2880683 - 2880633 - G 70 -8.3 -3.89346 | gap 2, overlap 2880634 GCGCGATCGTAGAAA CCCGC-GCCCTGCC-CGATTCGG TTGAGCG CCGAATCGAAGCCGAGCAGCGGC GCGACGATCAGATCG Swit_2599 2881361 - 2881663 + | excinuclease ABC subunit C Swit_2600 2882058 - 2881717 - | hypothetical protein Swit_2601 2882412 - 2884379 + | transketolase Swit_2602 2884395 - 2885402 + | glyceraldehyde-3-phosphate dehydrogenase Swit_2603 2885520 - 2885975 + | MOSC domain-containing protein pgk 2885978 - 2887171 + | phosphoglycerate kinase Swit_2605 2887173 - 2887607 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_2606 2887621 - 2888517 + | fructose-1,6-bisphosphate aldolase Swit_2607 2891745 - 2888560 - | CzcA family heavy metal efflux protein TERM 1424 2891076 - 2891098 + g 70 -12 -3.28487 | overlap 2891075 CGAGCGCCGCCAGCT TCTGGACGTC GGG GACGACCAGA TATTGCTTGGTGTAG Swit_2608 2892913 - 2891750 - | RND family efflux transporter MFP subunit Swit_2609 2894187 - 2892910 - | outer membrane efflux protein TERM 1425 2893236 - 2893267 + g 78 -13.6 -3.61398 | gap 1, overlap 2893260 CGGCGCGGGTGCGTT CGGCCCGCGCCTGCG CCA CGGCGGCGCGG-CCG TTGTTGAGCAGCGGG TERM 1426 2894088 - 2894123 + g 71 -11 -3.57144 | gap 1 GGTCGAGCGTGTAGA CGGGCGCCGCCTGCGTC GAC GACGCCGGCTGC-CCGG TTTGCGCCTGCGCCA Swit_2610 2894574 - 2894245 - | hypothetical protein Swit_2611 2895961 - 2894636 - | aminotransferase, class V Swit_2612 2896615 - 2896079 - | hypothetical protein Swit_2613 2897298 - 2896720 - | ECF subfamily RNA polymerase sigma-24 factor Swit_2614 2897729 - 2897295 - | hypothetical protein Swit_2615 2898012 - 2897731 - | hypothetical protein Swit_2616 2898134 - 2898523 + | copper resistance protein CopC Swit_2617 2898526 - 2899398 + | copper resistance D domain-containing protein TERM 1427 2899904 - 2899847 - g 71 -10.3 -3.79906 | CTATGGCGAGAAGAA GCGCGACGAGCTGACCGTCAAGGCGAA GCTG CTCGCCGCGACCGACGATCCGCCGCGC ATCCTAACCAGCGCG TERM 1428 2900510 - 2900565 + G 72 -15.3 -2.90212 | gap 1, opp_overlap 2900528 2900529 CCTGCTCGGCTTCCG CCCCTATC-CGCTCGACAACCGCCCG ATCTG CGGGCCGGTGCCGGGCGCGAAGGGGG TCTATGCGATCGTCA Swit_2618 2899488 - 2900699 + | FAD dependent oxidoreductase TERM 1429 2900742 - 2900758 + F 77 -4.4 -4.83615 | CGATTGACCACGATC CGGCTT CCTAT AAGCTG TTTTTATAGGACATC Swit_2619 2900786 - 2901679 + | LysR family transcriptional regulator Swit_2620 2903232 - 2901685 - | amidase Swit_2621 2905856 - 2903241 - | TonB-dependent receptor TERM 1430 2905595 - 2905564 - G 76 -13.7 -3.53012 | gap 1, opp_overlap 2905590, overlap 2905565 GGCGGCGTGGTGAAA TCGCCGACGCCCGA GGCGT TCGGGCG-CGGCGT GCTGAAGCTCGGCAC TERM 1431 2905594 - 2905565 - G 78 -17.2 -2.71712 | gap 1, opp_overlap 2905590, overlap 2905564 GCGGCGTGGTGAAAT CGCCGACGCCCGA GGCGT TCGGGCG-CGGCG TGCTGAAGCTCGGCA Swit_2622 2906775 - 2906050 - | ABC transporter related Swit_2623 2907860 - 2906772 - | polar amino acid ABC transporter, inner membrane subunit Swit_2624 2908981 - 2907857 - | binding-protein-dependent transport systems inner membrane component Swit_2625 2910024 - 2908981 - | extracellular solute-binding protein Swit_2626 2911322 - 2910027 - | cystathionine beta-lyase Swit_2627 2911437 - 2913485 + | carbon starvation protein CstA Swit_2628 2913482 - 2913667 + | hypothetical protein Swit_2629 2913679 - 2914932 + | sodium:dicarboxylate symporter Swit_2630 2914932 - 2915447 + | endoribonuclease L-PSP Swit_2631 2915505 - 2915930 + | PilT domain-containing protein Swit_2632 2915927 - 2916181 + | hypothetical protein Swit_2633 2917117 - 2916200 - | LysR family transcriptional regulator Swit_2634 2917282 - 2918634 + | benzoate 1,2-dioxygenase, alpha subunit Swit_2635 2918631 - 2919146 + | 2-chlorobenzoate 1,2-dioxygenase TERM 1432 2919375 - 2919402 + G 93 -17 -3.54424 | CGCGGCGGGCGCGCA GGCGGCGATGGC GGCG GCGATCGCCGCC TTTGGGCGCATCGAC benD 2919160 - 2919942 + | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase Swit_2637 2920468 - 2920025 - | hypothetical protein TERM 1433 2920549 - 2920524 - R 74 -5.3 -4.56597 | gap 1 CCCTCCTCCGAAAAA CCGACCCTCAGG CGC CCTG-GCGACGG GCGAGGAAGGCGAGC Swit_2638 2921376 - 2920531 - | ATPase TERM 1434 2920666 - 2920717 + g 93 -16.7 -3.9461 | gap 1 CACCTCGAGCGGCAT GTCCTCGACCAGC-AGCAGCTTGA GCCAG TCGAGCAGCTCGCTGGTCGACGGC TTCTTCTTGAGGCCG Swit_2639 2922125 - 2921448 - | hypothetical protein Swit_2640 2922300 - 2922989 + | sugar transferase Swit_2641 2922986 - 2923636 + | Serine acetyltransferase-like protein Swit_2642 2924322 - 2923633 - | sugar transferase Swit_2643 2925511 - 2924324 - | polysaccharide biosynthesis protein CapD Swit_2644 2926692 - 2925508 - | DegT/DnrJ/EryC1/StrS aminotransferase Swit_2645 2927843 - 2926689 - | glycosyl transferase, group 1 TERM 1435 2927196 - 2927145 - G 72 -3.4 -4.56597 | gap 1, opp_overlap 2927193, overlap 2927146 2927147 2927160 GCCTTCGTCGAAAAA GCCGA-CGAGCGAGAAGCGCGCCGC GGG GTGGCGCGCCTTGAGCCGGATCGCC GCCTCGGCATATTCG TERM 1436 2927180 - 2927160 - G 74 -13.9 -3.37796 | overlap 2927147 2927146 2927145 GCCGACGAGCGAGAA GCGCGCCGC GGG GTGGCGCGC CTTGAGCCGGATCGC TERM 1437 2928889 - 2928870 - H 85 -2.8 -5.37043 | overlap 2928872 ATGTTAGATAAAAAA TTCCCTTG GTGC CAAAGGCA AATCCTCCAGAATAA Swit_2647 2928992 - 2929237 + | hypothetical protein Swit_2648 2929939 - 2929229 - | glycosyl transferase, group 1 TERM 1438 2929856 - 2929840 - G 81 -2.1 -5.07486 | overlap 2929841 2929842 CATTGGGAATAAAAA TCCCGCC AGC GGAGGCA TATCCGTCCGACTCA Swit_2649 2930023 - 2930835 + | IS4 family transposase Swit_2651 2932246 - 2931242 - | hypothetical protein Swit_2652 2933558 - 2932278 - | polysaccharide biosynthesis protein TERM 1439 2932858 - 2932848 - GR 78 -6.8 -4.58236 | opp_overlap 2932848 CAGAAAAGAGGAAAA TCCG TTA CGGA TAGTATAAATAATTT Swit_2653 2934043 - 2933513 - | Serine acetyltransferase-like protein TERM 1440 2933992 - 2933974 - GR 86 -3 -5.19328 | opp_overlap 2933989 AGTTTATAAGAAAAA GCTGGC TGACTAG GCCCGC TCCGCGGTTACTGCG Swit_2654 2934799 - 2934053 - | hypothetical protein Swit_2655 2937491 - 2935632 - | gamma-glutamyltransferase TERM 1441 2937510 - 2937545 + H 100 -18.2 -3.84451 | CAAGCGTCCATGGAC GCCCGCTGGCCGGCGA GGTT TCGCCCGCCGGCGCGC TTTGCGTTTCGGCCC Swit_2656 2937605 - 2939080 + | signal recognition particle subunit FFH/SRP54 (srp54) TERM 1442 2939182 - 2939214 + G 85 -17.6 -3.14344 | TATTACCGCATCGTC GTCGCCGACGCGCG CAGCC CGCGCGACGGCGCC TTCATCGAGAAGATC rpsP 2939119 - 2939583 + | 30S ribosomal protein S16 TERM 1443 2939617 - 2939596 - f 84 -15.9 -3.29144 | opp_overlap 2939586, overlap 2939614 TGACCGTGGTGAGAA CCCCTCCCT TCCA AGGGAGGGG CAGGGGTGGGTGCGA TERM 1444 2939620 - 2939658 + F 78 -14.4 -3.01712 | opp_overlap 2939614 TCCAAGGGAGGGGCA GGGGTGGGTGCGAGCGAC GCA GTCGCGAGCCCCTGCCCC TCTTCCCCACCCCCG Swit_2658 2939699 - 2940172 + | 16S rRNA processing protein RimM Swit_2659 2940169 - 2940447 + | hypothetical protein Swit_2660 2940495 - 2940770 + | hypothetical protein Swit_2661 2940771 - 2941145 + | PilT domain-containing protein Swit_2662 2941156 - 2941896 + | tRNA (Guanine37-N(1)-) methyltransferase rplS 2941899 - 2942288 + | 50S ribosomal protein L19 TERM 1445 2942354 - 2942310 - f 71 -6.2 -4.31433 | gap 1, opp_overlap 2942314 2942319, overlap 2942306 2942311 GATTTCCATAACAAA CCTCGCAGGCGGCCGG-CTCC CTCG GGAGACCGGCCGTTTGCTTGT CTGGACGTAGCAACG TERM 1446 2942314 - 2942350 + F 95 -18.8 -3.49475 | gap 1, opp_overlap 2942311 2942310 2942306, overlap 2942319 TCCATAACAAACCTC GCAGGCGGCCGG-CTCC CTCG GGAGACCGGCCGTTTGC TTGTCTGGACGTAGC TERM 1447 2942319 - 2942345 + F 95 -15.9 -4.04174 | gap 1, opp_overlap 2942311 2942310 2942306, overlap 2942314 AACAAACCTCGCAGG CGGCCGG-CTCC CTCG GGAGACCGGCCG TTTGCTTGTCTGGAC Swit_2664 2942397 - 2943422 + | aspartate-semialdehyde dehydrogenase Swit_2665 2943527 - 2943970 + | glutathione-dependent formaldehyde-activating, GFA TERM 1448 2944691 - 2944718 + G 70 -12.1 -3.29511 | gap 1 CGCGGTGACCCTGCC CCAGCTCGGCGA CGCGA TCGCCGA-CTGG TTCTGAGGCCATCCA Swit_2666 2943951 - 2944724 + | alpha/beta hydrolase fold TERM 1449 2944892 - 2944847 - g 72 -13.2 -3.16055 | overlap 2944837 GAAACTCTCGATCAA GGCGGCGACG-TCCGCGCTGGC GCTC GCC-GCGCTGCTCGCCACCGCC CCGGCCCTCGCCGAG Swit_2667 2944830 - 2946692 + | peptidyl-dipeptidase A TERM 1450 2946791 - 2946781 - f 71 -8.2 -3.82824 | opp_overlap 2946781 CATGATTGACAATAA GCCG GAA CGGC TTTCGCGCCGCGATC Swit_2668 2946988 - 2948160 + | diguanylate cyclase Swit_2669 2949756 - 2948308 - | AMP nucleosidase TERM 1451 2949699 - 2949668 - G 73 -12.3 -3.48276 | gap 1 CCGGTCCGGATATAA TGGGTCAGCGCGGC GCGCA GCCGCGC-GACCGA CTCGCGGTAGAGCGT Swit_2670 2950284 - 2949802 - | redoxin domain-containing protein Swit_2671 2951507 - 2950281 - | glycosyl transferase, group 1 Swit_2672 2952695 - 2951745 - | glycosyl transferase family protein Swit_2673 2952720 - 2953280 + | hypothetical protein Swit_2674 2953409 - 2954818 + | S-adenosyl-L-homocysteine hydrolase TERM 1452 2954836 - 2954894 + F 70 -10.1 -3.54741 | gap 1, overlap 2954850 GATCCCGCGATCGCG GGACCATCG-GAACGCGCCCGGTCCGCC CCAT GGCGGGCCGGGCGTTTGCGTCCTGCTCC TTTCGCCGCGTCCTC TERM 1453 2954850 - 2954879 + F 100 -24.3 -3.69323 | overlap 2954836 GGGACCATCGGAACG CGCCCGGTCCGCC CCAT GGCGGGCCGGGCG TTTGCGTCCTGCTCC Swit_2675 2954970 - 2957366 + | PAS/PAC sensor signal transduction histidine kinase Swit_2676 2957505 - 2957978 + | hypothetical protein Swit_2677 2957960 - 2958946 + | aminoglycoside phosphotransferase Swit_2678 2958943 - 2959701 + | nucleotidyl transferase TERM 1454 2959719 - 2959676 - T 71 -13.2 -3.04144 | gap 3 CCGCGATCGGCAAGA CCGAGGCGCTGCTGGGGCGGA ACTGA TCCGCCCCCG--GCGCC-CGG TCCTCCCGGCCGACC Swit_2679 2959911 - 2959735 - | hypothetical protein Swit_2680 2960019 - 2962994 + | double-strand break repair protein AddB TERM 1455 2963626 - 2963667 + G 71 -11.5 -3.57263 | CGACGCGCTGGCCGC GCTCGGCGC-GCGCGGGGC GATCGA GCCCCG-GCTGCGCCACGC TTTCGACGTGCCGCT Swit_2681 2962991 - 2966419 + | double-strand break repair helicase AddA Swit_2682 2966471 - 2966791 + | thioredoxin Swit_2683 2967701 - 2966901 - | inositol-phosphate phosphatase Swit_2684 2968312 - 2967701 - | glutathione S-transferase domain-containing protein argJ 2969720 - 2968497 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Swit_2686 2969999 - 2969748 - | hypothetical protein TERM 1456 2971853 - 2971837 - g 90 -13.7 -4.00445 | GATGATGAACAAGAA CCTCGCC GAC GGCGAGG CGATCGTCAGCCCGT secA 2970023 - 2972761 + | preprotein translocase subunit SecA Swit_2688 2973000 - 2973371 + | hypothetical protein TERM 1457 2973492 - 2973468 - f 84 -8.5 -4.4078 | opp_overlap 2973478 TTTCTGTAACTAAAA GGCCGCAGG GCAGGCG CCTGGGGCC AGATTCTTTCGGGCG TERM 1458 2975463 - 2975488 + G 100 -6.1 -6.09196 | opp_overlap 2975466, overlap 2975464 2975466 TCGATAATGTGGTGG AAACCGACTTC GGCA GAAGTCGGTAG TTTTTTTGTTTTAGC Swit_2689 2973614 - 2975488 + | PAS/PAC sensor hybrid histidine kinase TERM 1459 2975464 - 2975487 + T 79 -9.6 -4.23077 | opp_overlap 2975466, overlap 2975463 2975466 CGATAATGTGGTGGA AACCGACTTC GGCA GAAGTCGGTA GTTTTTTTGTTTTAG TERM 1460 2975485 - 2975466 - T 75 -12.2 -3.54638 | opp_overlap 2975464 2975463 2975466 ATAATGTGGTGGAAA CCGACTTC GGCA GAAGTCGG TAGTTTTTTTGTTTT TERM 1461 2975466 - 2975485 + T 75 -12.2 -3.66605 | opp_overlap 2975466, overlap 2975464 2975463 ATAATGTGGTGGAAA CCGACTTC GGCA GAAGTCGG TAGTTTTTTTGTTTT TERM 1462 2975519 - 2975536 + T 73 -12.7 -3.14468 | CCTCAGGCGCCGGGC GGCGGAC ATCC GTCCGCC TTGGCTATCCTCGCA TERM 1463 2975743 - 2975723 - T 100 -16.9 -5.09762 | opp_overlap 2975742 GCCCAACAAACAAAA GCTCGGGCT TAC AGCCCGAGC GCCGCGTCGCTCGCC Swit_2690 2976171 - 2975731 - | ribonuclease H Swit_2691 2977144 - 2976182 - | homoserine kinase Swit_2692 2978094 - 2977144 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Swit_2693 2978135 - 2978881 + | hypothetical protein TERM 1464 2978865 - 2978881 + F 86 -6.5 -5.02074 | overlap 2978866 AGAGCCAGCTCGCCT ACAACGC GGC GCGTTGA TTTTTTAGACCCTCA TERM 1465 2978866 - 2978880 + F 70 -10 -3.60762 | overlap 2978865 GAGCCAGCTCGCCTA CAACGC GGC GCGTTG ATTTTTTAGACCCTC TERM 1466 2978907 - 2978924 + F 77 -14.1 -3.30701 | overlap 2978900 CCTCAAGCGCCGGGC GCCGGGC ATCC GCCCGGC TTGGCTTTCCTCGCA Swit_2694 2979362 - 2980495 + | glycine cleavage system aminomethyltransferase T Swit_2695 2980499 - 2980870 + | glycine cleavage system protein H Swit_2696 2981035 - 2982405 + | glycine dehydrogenase subunit 1 Swit_2697 2982402 - 2983976 + | glycine dehydrogenase subunit 2 TERM 1467 2984005 - 2983985 - gT 83 -12.5 -3.90318 | overlap 2983986 GGAGTAGTCGATAAA TCCTCCCCG GAA CGGGGAGGG GGACCGCGTAGCGGT TERM 1468 2984004 - 2983986 - gT 83 -16 -2.93869 | overlap 2983985 GAGTAGTCGATAAAT CCTCCCCG GAA CGGGGAGG GGGACCGCGTAGCGG TERM 1469 2984470 - 2984516 + GT 78 -15.7 -2.71447 | gap 1, overlap 2984468 GGAGGCGACGGTCGG CCTGATGCGCG-CGGCGGGCAG GCTA CTGCCGGCCGGCGCGCCGCTGG TGCTCTATGGTCCCT Swit_2698 2983940 - 2984725 + | hypothetical protein Swit_2699 2985698 - 2984730 - | 2-dehydropantoate 2-reductase Swit_2700 2986891 - 2985701 - | aromatic amino acid aminotransferase Swit_2701 2987066 - 2987545 + | AsnC family transcriptional regulator Swit_2702 2987790 - 2988524 + | class II aldolase/adducin family protein Swit_2703 2988636 - 2989190 + | TetR family transcriptional regulator Swit_2704 2989686 - 2989165 - | putative methyltransferase Swit_2705 2990543 - 2989683 - | pseudouridine synthase TERM 1470 2990625 - 2990639 + r 82 -2.8 -5.15634 | overlap 2990609 ATCCCGGCGAAAGCC GGGA TCTCACT TCCC TTTTTTCCTGCCCTG Swit_2706 2991386 - 2990700 - | Crp/FNR family transcriptional regulator Swit_2707 2991744 - 2991523 - | hypothetical protein Swit_2708 2991841 - 2992377 + | hypothetical protein Swit_2709 2992431 - 2992808 + | camphor resistance protein CrcB Swit_2710 2992805 - 2993911 + | ribosomal large subunit pseudouridine synthase C Swit_2711 2993908 - 2994600 + | HAD family hydrolase TERM 1471 2995229 - 2995277 + G 73 -10.1 -3.91028 | opp_overlap 2995238 2995239 GCTCGCCACCGAGGC CCGCGAGAACCGCCGCGCCGATT TCA AGGCGGCGGCGCGGTTGTTGGGG TTGTTGGTTTAGATT Swit_2712 2994597 - 2995289 + | ATP12 ATPase TERM 1472 2995316 - 2995333 + T 71 -12.7 -3.07935 | CCTCAGGCGCCGGGC GGCGGAC ATCC GTCCGCC TTGGCTACCTCGCAT Swit_2713 2995983 - 2995420 - | hypothetical protein gmk 2996865 - 2996224 - | guanylate kinase fumC 2998701 - 2997307 - | fumarate hydratase TERM 1473 2997883 - 2997904 + g 83 -14.5 -3.61715 | GTGGACGAGCGGATC GTTCGAGGC CAGC GCCTCGAAC TTGTTGGGCGCGGTG TERM 1474 2998712 - 2998743 + r 72 -4.2 -4.63218 | overlap 2998713 2998714 GGCATGGCGTTTCCC TCGGTCATCCCGGC GAAC GCCGGGATCTCCCC TTTTCTTCCCCGCCG Swit_2716 2999314 - 2998823 - | hypothetical protein Swit_2717 2999454 - 3000041 + | imidazoleglycerol-phosphate dehydratase hisH 3000043 - 3000669 + | imidazole glycerol phosphate synthase subunit HisH TERM 1475 3000746 - 3000728 - f 83 -13.2 -3.85698 | GGCGCTCGGGATAAA CTTCAGCC AAG GGCTGAAG GCCGGCATCTCGGGA TERM 1476 3001216 - 3001242 + G 70 -8.7 -3.85698 | gap 1, opp_overlap 3001200 CTGCCGGGCCGGATC GTCGTCG-GCGT CGAC GCGCGCGACGGC TTTGTCGCGACGCAC Swit_2719 3000838 - 3001569 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Swit_2720 3001566 - 3002330 + | imidazole glycerol phosphate synthase subunit HisF TERM 1477 3002357 - 3002331 - T 79 -13.6 -3.47349 | overlap 3002324 3002332 GTCCGAAACGGATAA TTCCTCCCCGGC AAA GCCGGGGAGGGG GACCGCCGAAGGCGG TERM 1478 3002356 - 3002332 - T 83 -17.1 -2.68088 | overlap 3002331 3002324 TCCGAAACGGATAAT TCCTCCCCGGC AAA GCCGGGGAGGG GGACCGCCGAAGGCG Swit_2721 3003621 - 3002485 - | hypothetical protein Swit_2722 3004994 - 3003648 - | NADPH-glutathione reductase Swit_2723 3006694 - 3005192 - | glucose-6-phosphate isomerase TERM 1479 3006940 - 3006924 - g 100 -10.9 -4.67982 | CGTCACGGAAGAAAA GGTCGAT CGC ATCGACC GGGTGATGAAGCAGA Swit_2724 3006868 - 3007893 + | methyl-accepting chemotaxis sensory transducer Swit_2725 3007972 - 3008625 + | N-(5'-phosphoribosyl)anthranilate isomerase Swit_2726 3008622 - 3009851 + | tryptophan synthase subunit beta trpA 3009985 - 3010800 + | tryptophan synthase subunit alpha Swit_2728 3010797 - 3011651 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Swit_2729 3011754 - 3013115 + | FolC bifunctional protein Swit_2730 3013273 - 3013710 + | hypothetical protein Swit_2731 3013912 - 3016596 + | aconitase TERM 1480 3016632 - 3016607 - T 76 -10.3 -3.89957 | overlap 3016600 3016608 CGTAAGAAGGAATAA TCCCCCTCCCG CTTG CGGGAGGGGTC AGGGGTGGGCGCGCG TERM 1481 3016631 - 3016608 - T 74 -13.8 -2.93251 | overlap 3016600 3016607 GTAAGAAGGAATAAT CCCCCTCCCG CTTG CGGGAGGGGT CAGGGGTGGGCGCGC TERM 1482 3016632 - 3016674 + T 86 -18.4 -2.52464 | overlap 3016636 GCTTGCGGGAGGGGT CAGGGGTGGGCGCGCGGCCC GGA GGGTCGCGCTTCTACCTTTG TGGCTTCGGAGGCCC TERM 1483 3016636 - 3016670 + T 100 -17.8 -3.97368 | overlap 3016632 GCGGGAGGGGTCAGG GGTGGGCGCGCGGCCC GGA GGGTCGCGCTTCTACC TTTGTGGCTTCGGAG Swit_2732 3019508 - 3016743 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 1484 3018467 - 3018492 + g 75 -10.3 -3.99374 | opp_overlap 3018454 AAGCGATGTCGACCA GCTCCGCGCCG TCCT CGCCGCGCAGC TTCTTGTTCCTGACG Swit_2733 3021503 - 3019689 - | hypothetical protein TERM 1485 3020948 - 3020938 - G 89 -2.4 -5.24129 | GCTTGGCACAAAAAA CGCC GAT GGAG CTGGACGACCTCCTC Swit_2735 3021829 - 3023160 + | general substrate transporter Swit_2736 3023839 - 3023171 - | glycine cleavage T protein (aminomethyl transferase) Swit_2737 3023880 - 3025205 + | dihydroorotase Swit_2738 3025542 - 3026117 + | CHAP domain-containing protein TERM 1486 3026093 - 3026118 + T 72 -2.3 -4.74103 | opp_overlap 3026069, overlap 3026094 3026097 3026100 CAAGTCGACCGCCGC CGCCGTCCAGG CCGT CCAGGGCTGAG TTTTTCCGTTCGGCC TERM 1487 3026137 - 3026154 + T 73 -12.7 -3.12999 | overlap 3026094 TTCCGTTCGGCCTTG CGGAGCC TGAC GGCTCCG TTCCCTATCACGTCA Swit_2739 3026541 - 3026185 - | plasmid stabilization system protein Swit_2740 3026808 - 3026545 - | prevent-host-death family protein Swit_2741 3027534 - 3026863 - | HAD family hydrolase Swit_2742 3027641 - 3028738 + | hypothetical protein Swit_2743 3028738 - 3029556 + | ABC transporter related Swit_2744 3029564 - 3030511 + | hypothetical protein Swit_2745 3030516 - 3031103 + | ABC-type uncharacterized transport system auxiliary component-like protein TERM 1488 3031132 - 3031147 + F 71 -5.4 -4.46926 | overlap 3031117 3031115 TCATGCCTGCGGAGG CAGGCA TCCA TGTCTG TTTTCTCCTCAGCTG Swit_2746 3031238 - 3033310 + | threonyl-tRNA synthetase TERM 1489 3033359 - 3033316 - f 84 -16 -3.05816 | gap 1, opp_overlap 3033344 3033345, overlap 3033326 3033338 CCACCCCTGACGCAA GCCGGACAC-AGGCCGCGACA AAG CGTCGCGGCCTCGCACGCGGC CATCTTTCCAAGTGA TERM 1490 3033348 - 3033326 - f 87 -17 -2.89742 | opp_overlap 3033344 3033345, overlap 3033316 3033338 CGCAAGCCGGACACA GGCCGCGACA AAG CGTCGCGGCC TCGCACGCGGCCATC TERM 1491 3033697 - 3033685 - g 81 -3.3 -4.84359 | CGAGGCCCAGAAAAA GGCCA ATC TTGCC CGGAAGTCGCAGAAG infC 3033467 - 3033976 + | translation initiation factor IF-3 Swit_2748 3034758 - 3034117 - | hypothetical protein TERM 1492 3034734 - 3034684 - G 72 -15.3 -2.96692 | gap 1 GAGCACCACCAGATA GTGGAGCACGACCCCGGCGGCGGC GCAC GCCGCCACCAGCG-CATGCGCCGC GCGGCTGGCCCGGCC Swit_2749 3035144 - 3034755 - | hypothetical protein Swit_2750 3035589 - 3035338 - | hypothetical protein TERM 1493 3036256 - 3036310 + G 82 -13.3 -3.77832 | overlap 3036304 TCCGAAGGCGCGGGC GGCGACGCTCGACCGGGTCGCGGCG CTGCT CGCCGCGAACCAGGCAAGCGGGGTC TTCTTCGATTTCGAG TERM 1494 3038113 - 3038062 - g 78 -18.2 -2.71364 | gap 3 CGACGGGTCGAAGGA CCGGACCAGCGCGG-TCGTCGCCGA GGCCT TCGCCGACGAGCCGCGC-G-TCCGG CTGCTGACCGTCGAG Swit_2751 3035693 - 3039049 + | polysaccharide deacetylase TERM 1495 3040535 - 3040586 + G 85 -20.9 -2.62184 | GGCCTGCTCGTCGTC GCGCCGGGGCTGC-AGCGGCGGCGG ATCG TCGTCGC-GCTCGCCGCCTCGGCGC TGCTCTACGGCGGCG Swit_2752 3039302 - 3040780 + | hypothetical protein Swit_2753 3041593 - 3040811 - | NAD-dependent epimerase/dehydratase Swit_2754 3041665 - 3044262 + | aminopeptidase N Swit_2755 3044417 - 3045478 + | membrane-like protein Swit_2756 3045462 - 3046526 + | peptidase M48, Ste24p Swit_2757 3046625 - 3047359 + | hypothetical protein Swit_2758 3047359 - 3048120 + | tetratricopeptide domain-containing protein Swit_2759 3048177 - 3048902 + | hypothetical protein Swit_2760 3051318 - 3049057 - | malic enzyme TERM 1496 3051709 - 3051683 - g 78 -12.2 -3.72576 | GCCCGGCTGATCAAA GCCGGCCACCGC GTC GCGATCGCCGAC CAGACCGAGAGCCCG TERM 1497 3052630 - 3052586 - g 77 -14.8 -3.14564 | gap 1 CGACTGCTCCACGAA CTGCTCGGCCGCGCCGCGCCG ATGC CGGCGCTGCTCG-CCGGGCTG CTGCCGCAGCTCGTC Swit_2761 3051347 - 3054061 + | DNA mismatch repair protein Swit_2762 3054173 - 3054778 + | hypothetical protein Swit_2763 3055220 - 3054789 - | thioesterase superfamily protein Swit_2764 3056591 - 3055230 - | GntR family transcriptional regulator TERM 1498 3057002 - 3057020 + G 73 -10.3 -3.9461 | overlap 3056989 GCGCCCGCTCAAGGG CTGGCTG GTGTG CAGCCAG TTCTTCTTCAAGGCG Swit_2765 3056673 - 3057116 + | hypothetical protein TERM 1499 3058294 - 3058312 + G 77 -14.6 -3.22298 | CAGCCTGCGCCGCCG GCCGTCGA AGC TCGACGGC TTCGTGCTCGATCGC TERM 1500 3058475 - 3058504 + G 71 -9.9 -3.72324 | gap 1, opp_overlap 3058474 3058475 AAGCTGATCGACAAT GGCGTGCGC-CGCG ATC CGCGCGCCAACGCC TTGTTCATGGACGTG TERM 1501 3058556 - 3058596 + G 72 -3.2 -4.63486 | gap 1, opp_overlap 3058564, overlap 3058559 3058560 3058564 GACAAGGTGCTGCGC TGGATGAACGAGGCGGGGG TGTT CGGCCGCTTCGTTCC-CTA TTTTGTTGAAAAACT Swit_2766 3057176 - 3058639 + | (protein-PII) uridylyltransferase TERM 1502 3059295 - 3059316 + G 73 -7.1 -4.11216 | opp_overlap 3059268, overlap 3059296 AGCCTCGCGCTGGAC CGCCGCCAC GCGC GAGGCGGCC TTTTACGCCTACAGC Swit_2767 3058672 - 3060045 + | IS4 family transposase Swit_2768 3060150 - 3061469 + | metal dependent phosphohydrolase Swit_2769 3062013 - 3061486 - | hypothetical protein Swit_2770 3062558 - 3062043 - | GCN5-related N-acetyltransferase TERM 1503 3062162 - 3062142 - G 70 -12.5 -3.28712 | opp_overlap 3062135 3062132 CTGCGCCGCCCAGAA GCCGTCGGC GCC GCCGACCGC CGTCAGGGTGATGTC Swit_2771 3062977 - 3062555 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1504 3063084 - 3063105 + r 83 -9.4 -4.26881 | gap 1, overlap 3063079 CCCGCGAGCGGCGGG GGCCGG-GC CAACC GCACCGGCC TTTCCTTTTCTGACC TERM 1505 3063152 - 3063185 + r 71 -13.7 -2.6063 | opp_overlap 3063154, overlap 3063149 3063148 ATCGGCGAAAGAAAA AAGGGCCCGCCCGGA TCGC TCCGGACGGGCCCAG TCGCTTCTGGATGAA TERM 1506 3063183 - 3063154 - R 100 -22.9 -5.63517 | opp_overlap 3063152 3063149 3063148 CGGCGAAAGAAAAAA GGGCCCGCCCGGA TCGC TCCGGACGGGCCC AGTCGCTTCTGGATG hppA 3065307 - 3063205 - | membrane-bound proton-translocating pyrophosphatase TERM 1507 3064617 - 3064660 + g 70 -13 -3.30441 | opp_overlap 3064617, overlap 3064618 CATAGGTCTCGAACA GGTCGGCCGCCATGCCGGCG CAGT CGCCGACATTGTCGCCGACA TTGTCCGCGATGGTG TERM 1508 3064618 - 3064659 + g 73 -16.5 -2.5805 | opp_overlap 3064617, overlap 3064617 ATAGGTCTCGAACAG GTCGGCCGCCATGCCGGCG CAGT CGCCGACATTGTCGCCGAC ATTGTCCGCGATGGT TERM 1509 3065194 - 3065206 + g 70 -4.1 -4.4078 | overlap 3065184 CTGAATCGCCGCGGC GATGT CCT GCATC TTTTCATTGCCGGCC Swit_2773 3066421 - 3065489 - | thiamine-monophosphate kinase TERM 1510 3066520 - 3066551 + r 74 -10 -3.78934 | opp_overlap 3066504, overlap 3066521 TCGAGGCAGGAGCCG CCCGAGATGCCGGC CTCC GCCGGCATGACGGC TTCTTCTCACCCCGC TERM 1511 3066521 - 3066550 + r 74 -13.5 -2.87146 | opp_overlap 3066504, overlap 3066520 CGAGGCAGGAGCCGC CCGAGATGCCGGC CTCC GCCGGCATGACGG CTTCTTCTCACCCCG Swit_2774 3067337 - 3066558 - | hypothetical protein Swit_2775 3067804 - 3067349 - | NusB antitermination factor Swit_2776 3069101 - 3067809 - | histidinol dehydrogenase hisG 3069756 - 3069091 - | ATP phosphoribosyltransferase catalytic subunit Swit_2778 3070380 - 3069814 - | hypothetical protein TERM 1512 3070411 - 3070460 + r 71 -12.8 -3.02511 | gap 1, opp_overlap 3070388 3070415 CGGGCGGACTATGGA CAGACGACACCAGACCCCCCGCC CGGCA GGCGGAGG-TCGGGTGTCATCGG TCTTGCCAAGCTCGA TERM 1513 3070456 - 3070415 - R 79 -15.9 -2.92463 | gap 1, opp_overlap 3070411, overlap 3070388 CGGACTATGGACAGA CGACACCAGACCCCCCGCCC GGC AGGCG-GAGGTCGGGTGTCA TCGGTCTTGCCAAGC Swit_2779 3071132 - 3070632 - | Ferritin, Dps family protein TERM 1514 3071315 - 3071331 + H 100 -10.8 -5.04249 | opp_overlap 3071315 GGCCCCATCCGAACA GCGGCG CGCGA CGCCGC TTTATTTTTTGCACA rpmG 3071367 - 3071534 + | 50S ribosomal protein L33 TERM 1515 3071561 - 3071611 + T 100 -6.1 -5.95539 | gap 1, opp_overlap 3071575 3071577, overlap 3071536 3071570 3071577 GCTTCGCGCCCGTGG CCTTCTGATCGAAAGACACCCGCC TCCG GGCGGGTGT-TTTCGTTTGTCTGG TTTTTTTGTTTGGCC TERM 1516 3071570 - 3071602 + T 100 -17.2 -4.24562 | gap 1, opp_overlap 3071575 3071577, overlap 3071561 3071577 CCGTGGCCTTCTGAT CGAAAGACACCCGCC TCCG GGCGGGTGT-TTTCG TTTGTCTGGTTTTTT TERM 1517 3071598 - 3071575 - T 75 -12.4 -3.64703 | opp_overlap 3071570 3071561 3071577, overlap 3071577 GCCTTCTGATCGAAA GACACCCGCC TCCG GGCGGGTGTT TTCGTTTGTCTGGTT TERM 1518 3071596 - 3071577 - T 83 -15 -3.40597 | opp_overlap 3071570 3071561 3071577, overlap 3071575 CTTCTGATCGAAAGA CACCCGCC TCCG GGCGGGTG TTTTCGTTTGTCTGG TERM 1519 3071577 - 3071596 + T 100 -15 -4.65153 | opp_overlap 3071577 3071575, overlap 3071570 3071561 CTTCTGATCGAAAGA CACCCGCC TCCG GGCGGGTG TTTTCGTTTGTCTGG TERM 1520 3071641 - 3071658 + T 74 -12.7 -3.30701 | overlap 3071634 CCTCAGGCGCCGGGC GGCCAGC ATCC GCTGGCC TTGGCTTTCCTCGCA Swit_2781 3072200 - 3071799 - | response regulator receiver protein TERM 1521 3072163 - 3072178 + g 91 -2.6 -5.40072 | gap 1 AGATTCAGCTCATTA TCCTCGA CAA TC-AGGA TTTTTTTCGCCACGG Swit_2783 3072532 - 3073152 + | hypothetical protein Swit_2784 3073280 - 3073747 + | endoribonuclease L-PSP Swit_2785 3073725 - 3074486 + | glycerophosphoryl diester phosphodiesterase Swit_2786 3074480 - 3075625 + | hypothetical protein TERM 1522 3075813 - 3075798 - T 70 -11.8 -3.14468 | TGCGAGGATAGCCAA GCGGGC GGAT GCCCGC GCCGGCGCCTGAGGC Swit_2787 3076133 - 3075837 - | Sel1 domain-containing protein TERM 1523 3076068 - 3076094 + g 74 -15 -3.06133 | opp_overlap 3076056 GCAGGCGTCGATGTC GCCCGCCATCGC GTC GCGCAGGCGGGC TTCGGTCAGGAATTG Swit_2788 3077117 - 3076269 - | pantothenate synthetase Swit_2789 3077201 - 3078004 + | ATPase MipZ Swit_2790 3078001 - 3078393 + | heat shock protein DnaJ domain-containing protein Swit_2791 3078451 - 3079833 + | phosphomannomutase TERM 1524 3079863 - 3079920 + F 75 -12.1 -3.65902 | gap 1, opp_overlap 3079863, overlap 3079850 3079847 3079856 3079854 GTCATCCCAGCGAAA GCTGGGATCTCCCTTCTTTCGCCTCG TTCTCCC CGC-GCGAAGGCAGTGAGATTCCAGC TTTCGCTGGAATGAC Swit_2792 3079951 - 3082356 + | DEAD/DEAH box helicase domain-containing protein Swit_2793 3082873 - 3082385 - | hypothetical protein TERM 1525 3082830 - 3082795 - G 82 -4 -5.03314 | gap 2, overlap 3082775 3082796 3082797 CCCATCCCGAAAAAA TTCCGAGCGGCGTCCG TCCGGG CGGG-GCCGC-CGAAA CGAGCATCGGCAGGG Swit_2794 3083022 - 3083588 + | opacity protein and related surface antigens-like protein TERM 1526 3083618 - 3083641 + F 100 -17.4 -4.54727 | opp_overlap 3083618 TTGCGTAGCATGGAA GGGCCTGGCG TCAC CGCCGGGCCC TTTTCCTTTGCCCGG TERM 1527 3083641 - 3083618 - f 81 -15.2 -3.09516 | opp_overlap 3083618 TTGCGTAGCATGGAA GGGCCTGGCG TCAC CGCCGGGCCC TTTTCCTTTGCCCGG TERM 1528 3084730 - 3084693 - g 74 -13.3 -3.30441 | GACGAGCCCCGAGAA CGGCACCGCGGCCGAGG AAGT CCCCGGCGACTATGCCG CCACCGGCTTCGAGA Swit_2795 3083785 - 3084897 + | DNA polymerase III subunit beta Swit_2796 3084936 - 3085892 + | glutaminase TERM 1529 3085961 - 3085997 + T 72 -7.2 -4.11216 | gap 1, opp_overlap 3085960 3085961, overlap 3085963 3085963 GGTAGAGGCAGGAAC CTC-CCGAGATCCCAGC TTTC GCTGGGATGACGGCGTG TTTTCGGCCTGCGCC Swit_2797 3086428 - 3086012 - | hypothetical protein Swit_2798 3087255 - 3086437 - | hydroxyacylglutathione hydrolase recF 3087704 - 3088774 + | recombination protein F Swit_2801 3089180 - 3088803 - | camphor resistance protein CrcB TERM 1530 3089313 - 3089342 + H 72 -2.6 -4.75954 | overlap 3089321 CGCCACCGCGTCAAC GCGGGGCCGGCC CGGTCC GTCCGGTGCCTC TTTCTTTTGGCTTTT Swit_2802 3089384 - 3091864 + | DNA gyrase subunit B TERM 1531 3091874 - 3091921 + T 77 -12.8 -3.65902 | GTGTGACCTGCCCCC GCCGGAATCTCCCTTCTATTGT CTCG ATAAAGGCAGGGAGATTCCAGC TTTCGCTGGAATGAC Swit_2803 3093288 - 3091939 - | hypothetical protein Swit_2804 3096110 - 3093285 - | membrane-like protein Swit_2805 3097035 - 3096193 - | hypothetical protein TERM 1532 3096613 - 3096601 - G 75 -5.5 -4.58283 | overlap 3096604 GAAGCGGGCGAAAAA GACCG ATC CGATC TGCAACGCGATCGCC Swit_2806 3097208 - 3097774 + | hypothetical protein Swit_2807 3098279 - 3097749 - | activator of Hsp90 ATPase 1 family protein Swit_2808 3098827 - 3098276 - | hypothetical protein TERM 1533 3098905 - 3098874 - R 100 -23.8 -4.19735 | overlap 3098857 CGGCCCAAAAGCAAA CCGCCCGTTCCCCG CGAA CGGGAAACGGGCGG CGCGGATGCTGCGGG Swit_2809 3099277 - 3098954 - | hypothetical protein Swit_2810 3099908 - 3099309 - | TrpR binding protein WrbA TERM 1534 3100007 - 3100035 + r 70 -12.3 -3.14344 | overlap 3099994 GCTGCTCCCGAGGTG CCGGCCTCCGCCG GCA CGACGGAGGATGG TTGCTACGCCACGTC Swit_2811 3100737 - 3100039 - | pirin domain-containing protein TERM 1535 3100310 - 3100360 + g 70 -12.3 -3.31144 | opp_overlap 3100312, overlap 3100311 CTCGCCAGGGTGACG AACTGGCCGGCGCGGTCGCCCCT GGGGA AGGGGCGGGCGCCCCAGCCGGGC TTGTCGCCCTGCCGA TERM 1536 3100311 - 3100359 + g 73 -15.8 -2.58544 | opp_overlap 3100312, overlap 3100310 TCGCCAGGGTGACGA ACTGGCCGGCGCGGTCGCCCCT GGGGA AGGGGCGGGCGCCCCAGCCGGG CTTGTCGCCCTGCCG TERM 1537 3100358 - 3100312 - G 85 -17.1 -3.15544 | opp_overlap 3100311 3100310 CGCCAGGGTGACGAA CTGGCCGGCGCGGTCGCCCCT GGGGA AGGGGCGGGCGCCCCAGCCGG GCTTGTCGCCCTGCC Swit_2812 3100863 - 3101780 + | LysR family transcriptional regulator Swit_2813 3101956 - 3102225 + | hypothetical protein Swit_2814 3102298 - 3102738 + | LuxR family transcriptional regulator Swit_2815 3102847 - 3103386 + | hypothetical protein Swit_2816 3103558 - 3104037 + | methionine-R-sulfoxide reductase TERM 1538 3104229 - 3104210 - g 82 -5.7 -4.75404 | gap 1 AAACCCCAGGAAAAA GCCTAGCC GCATG GGCT-GGC TCCGCACCCTCTTCA Swit_2817 3104181 - 3106310 + | 1A family penicillin-binding protein Swit_2818 3107040 - 3106318 - | hypothetical protein Swit_2819 3107581 - 3107141 - | hypothetical protein Swit_2820 3108203 - 3107583 - | electron transport protein SCO1/SenC Swit_2821 3108257 - 3108883 + | ankyrin Swit_2822 3109314 - 3108880 - | GCN5-related N-acetyltransferase Swit_2823 3109890 - 3109387 - | hypothetical protein Swit_2824 3110259 - 3109921 - | hypothetical protein Swit_2825 3110739 - 3110284 - | thioesterase superfamily protein Swit_2826 3111247 - 3110762 - | PTS IIA-like nitrogen-regulatory protein PtsN Swit_2827 3111849 - 3111268 - | SSU ribosomal protein S30P Swit_2828 3112633 - 3111929 - | DNA polymerase III, epsilon subunit Swit_2829 3113234 - 3112626 - | dephospho-CoA kinase TERM 1539 3113294 - 3113263 - R 70 -11.6 -3.21747 | gap 1, overlap 3113276 TCAGGCGACCAGCAA CG-CGCGCAACGC ATCGTCG GCGTCGCGCGGCG CGGGCCGGCCATAGA Swit_2830 3114117 - 3113248 - | shikimate dehydrogenase Swit_2831 3114707 - 3114114 - | maf protein Swit_2832 3115710 - 3114886 - | hypothetical protein Swit_2833 3116149 - 3117183 + | uroporphyrinogen decarboxylase Swit_2834 3117188 - 3117640 + | hypothetical protein rho 3117900 - 3119156 + | transcription termination factor Rho Swit_2836 3119175 - 3119879 + | methyltransferase type 11 TERM 1540 3119934 - 3119949 + T 70 -11.8 -3.14344 | CGGGAGCGCTCACGC CGCGCG CCGT CGCGCG TTGATCCGCAGGATC Swit_2837 3120329 - 3119928 - | MerR family transcriptional regulator Swit_2838 3120403 - 3121260 + | methyltransferase type 11 Swit_2839 3121309 - 3121959 + | integral membrane protein TerC Swit_2840 3122246 - 3123304 + | hypothetical protein TERM 1541 3123354 - 3123332 - T 74 -11.9 -3.52652 | opp_overlap 3123332 CCCATCGAATCATAA GGGCTCGCC AGGGG GGCGGGCCC TTTTCTTTCCTCCTC TERM 1542 3123332 - 3123354 + T 100 -14.1 -4.95484 | opp_overlap 3123332 CCCATCGAATCATAA GGGCTCGCC AGGGG GGCGGGCCC TTTTCTTTCCTCCTC Swit_2841 3124470 - 3123493 - | alcohol dehydrogenase TERM 1543 3123921 - 3123940 + g 70 -12.1 -3.30124 | CGACGCCGGCGCCGA GGCCGCG CGCGAT CGCGGCC TTGTCGGCGCTGCCG Swit_2842 3125174 - 3124476 - | carboxymethylenebutenolidase Swit_2843 3125659 - 3125171 - | methylated-DNA--protein-cysteine methyltransferase Swit_2844 3125743 - 3126006 + | hypothetical protein trmE 3125981 - 3127303 + | tRNA modification GTPase TrmE TERM 1544 3127307 - 3127322 + F 83 -7.6 -4.65895 | ATCGGCAAATGAGCA TGTTCC ACGT GGAACA TTTTTGACTCCGGGC Swit_2846 3127362 - 3129221 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1545 3129651 - 3129684 + G 81 -7.9 -4.57569 | overlap 3129636 GCGCGCGCGCCTTCG CGCCGCTCGACCGGC TGCT GCCGCTCGCGCACCG TTTTTCGCACGATGC Swit_2847 3129218 - 3129871 + | methyltransferase GidB Swit_2848 3129868 - 3130647 + | chromosome segregation ATPase Swit_2849 3130644 - 3131540 + | chromosome segregation DNA-binding protein TERM 1546 3131624 - 3131602 - T 93 -17.8 -3.36878 | overlap 3131587 GCGATTGATCTACAA TCCCTCTCCC TTG GGGAGAGGGA AGGGCCCGCCGCCGC Swit_2850 3132793 - 3131771 - | DNA polymerase III, delta subunit Swit_2851 3133324 - 3132818 - | secreted (periplasmic)-like protein leuS 3135828 - 3133321 - | leucyl-tRNA synthetase Swit_2853 3136436 - 3135843 - | hypothetical protein TERM 1547 3136838 - 3136817 - g 74 -11.5 -3.71848 | CCGCTCCAGCAACAA GCCGAGCGC CGGC GCGCTCGCC GCCGCCAACAGCTCG Swit_2854 3136548 - 3137240 + | hypothetical protein Swit_2855 3137956 - 3137420 - | thiamine monophosphate synthase Swit_2856 3137979 - 3138644 + | alanine racemase domain-containing protein Swit_2857 3139904 - 3138660 - | hypothetical protein TERM 1548 3139171 - 3139129 - G 74 -16.4 -2.78935 | gap 3 ACATGGTGGACCAGA TCGACGCCGGGCGCCGCCGCG ACCG CGCGGCG-CGCC-AGCG-CGA TCCCCAGCCGGGCGC Swit_2858 3140916 - 3139999 - | Mg2+ transporter protein, CorA family protein TERM 1549 3140185 - 3140161 - G 85 -17.3 -3.15544 | opp_overlap 3140166 3140184 GGTCAGTGGCAGGAA GATCATCGCGA CGA TCGCGATGATC AGCGATCGGCGGTCG TERM 1550 3141563 - 3141537 - H 76 -13.6 -3.16564 | GGCGCAGGCGACGAA GGCGAGGCGCGC CTC GCGGCCCTCGCC CTCCGCCTCGTCGAT TERM 1551 3142562 - 3142516 - g 72 -8.7 -4.0371 | TACGGTCCATACAAA GCGATCGCCGAGGCG-GCCGG CTGCACC CCGGCGCAGCTCG-CGCTCGC CTGGCTGCTCCATCG Swit_2860 3141775 - 3142770 + | aldo/keto reductase Swit_2861 3143746 - 3142877 - | UDP-glucose pyrophosphorylase Swit_2862 3145084 - 3143813 - | diaminopimelate decarboxylase TERM 1552 3144391 - 3144419 + g 73 -15.9 -2.52623 | overlap 3144390 3144389 CGATGCGGTGCCCGG CGGCGCGCAGTTC GGC GATCAGCGCGCCG ATCTTCTCGAAGGCG Swit_2863 3145463 - 3145218 - | hypothetical protein Swit_2864 3146836 - 3145460 - | argininosuccinate lyase Swit_2865 3146883 - 3147395 + | redoxin domain-containing protein Swit_2866 3147887 - 3147504 - | glyoxalase/bleomycin resistance protein/dioxygenase Swit_2867 3147998 - 3148819 + | extradiol ring-cleavage dioxygenase III subunit B TERM 1553 3148858 - 3148836 - f 81 -9.8 -4.15565 | opp_overlap 3148836 3148837, overlap 3148837 3148843 GGGATGACGGCAAAA GGAACCAGCG CCG CGCCGGTTCA TTTTCCTGTGGCAAT TERM 1554 3148836 - 3148858 + F 76 -7.6 -4.3467 | opp_overlap 3148836 3148837 3148843, overlap 3148837 GGGATGACGGCAAAA GGAACCAGCG CCG CGCCGGTTCA TTTTCCTGTGGCAAT TERM 1555 3148857 - 3148837 - f 71 -13.3 -3.09018 | opp_overlap 3148837 3148836, overlap 3148836 3148843 GGATGACGGCAAAAG GAACCAGCG CCG CGCCGGTTC ATTTTCCTGTGGCAA Swit_2868 3148925 - 3150001 + | hypothetical protein Swit_2869 3150637 - 3150026 - | SNARE associated Golgi protein TERM 1556 3150706 - 3150755 + H 70 -11.6 -3.14602 | gap 2, opp_overlap 3150705, overlap 3150708 3150709 CGCGTCATGGAAGAT TGTCCCGTCGTTCGTCATGCCGGC CTCC GCCGGCATGACGA--GATAGGATG TGTTGATACGGTCAC TERM 1557 3150708 - 3150753 + H 80 -14.2 -3.13371 | gap 2, opp_overlap 3150705, overlap 3150706 3150709 CGTCATGGAAGATTG TCCCGTCGTTCGTCATGCCGGC CTCC GCCGGCATGACGA--GATAGGA TGTGTTGATACGGTC Swit_2870 3150830 - 3151135 + | protein of unknown function YGGT TERM 1558 3151299 - 3151266 - g 85 -18.1 -3.14132 | CTGGCTCTCGATCAA GCTCGCCGCCGCGCC CAGC GACGGGGCGGCGAAC GAGGCGCTGGTGCGG Swit_2871 3151225 - 3151449 + | hypothetical protein TERM 1559 3151816 - 3151795 - g 79 -2.3 -4.9218 | gap 1, overlap 3151796 3151797 CATCGACGAGAAAAA GGTGATCG CGACGAT CGATC-CC GACAAGGACGTCGAC Swit_2872 3151451 - 3152365 + | methenyltetrahydrofolate cyclohydrolase Swit_2873 3152362 - 3153003 + | multiple antibiotic resistance (MarC)-related protein Swit_2874 3154821 - 3153013 - | hypothetical protein TERM 1560 3153388 - 3153427 + g 82 -8.4 -4.4078 | gap 1 GAGCGCGGGCAGGGT GGTGCAGCGGCGCGGCTGG CGA TCGGCTTCGGCGC-GCGCC TTTTCCTTGCGGACC TERM 1561 3153944 - 3153898 - G 85 -16.5 -3.63515 | gap 1, overlap 3153901 GCTGAGCGCGAAGAA GACGGCGA-TGGCCGCGCCCGC GGCG GCCAGCGCGGCGAGCCGCCGCC ACGGCCCCCGGATGG Swit_2875 3155228 - 3155710 + | GtrA family protein Swit_2876 3155707 - 3156711 + | glycosyl transferase family protein Swit_2877 3156711 - 3157433 + | methyltransferase type 12 Swit_2878 3159041 - 3157446 - | hypothetical protein Swit_2879 3160912 - 3159137 - | hypothetical protein TERM 1562 3160518 - 3160468 - G 78 -16.1 -3.04792 | GCAGGACGTGGAACA GGATCATCGGCGC-GGTCGCGGCGA GCG TCGCCGCGAGCAGCGCCG-CGCGCC GGCCGGCGAGCCGCG TERM 1563 3161020 - 3160988 - R 93 -14.8 -4.07885 | opp_overlap 3160997 GATCGTCCCGCAAAA CTCCGCCAAGGGGG ATCGA CCCCCTTGGCTGCG TCACCCACCCCTTGC Swit_2880 3162604 - 3161069 - | hypothetical protein Swit_2881 3162761 - 3165220 + | amidohydrolase Swit_2882 3165210 - 3166343 + | peptidase M19, renal dipeptidase Swit_2883 3167024 - 3166353 - | glutathione S-transferase domain-containing protein Swit_2884 3168387 - 3167110 - | sodium:dicarboxylate symporter TERM 1564 3168549 - 3168577 + r 100 -14 -4.58395 | gap 1 TCCGTACCCCACCCT TTCATCCCTCCCC TGAA GGGGAGGGA-GAA TTTTTGGGAGCTACC Swit_2885 3170609 - 3168588 - | TonB-dependent receptor TERM 1565 3168623 - 3168675 + g 85 -16.2 -3.65201 | overlap 3168650 3168653 CCACCCACAGCGTCC GCGGCGTCG-CGCGTTCGACGGTGCC GTC GGCGCCGACGGTCGCCTCGACG-CGC TTGTTGGCGATGTTC Swit_2886 3171591 - 3170794 - | putative hemolysin-like protein Swit_2887 3171747 - 3173204 + | glucose-6-phosphate 1-dehydrogenase TERM 1566 3173255 - 3173295 + F 86 -15.4 -3.55444 | GGGGGACCACCCATA GGGTGGTGGAGGGGTTGG GGTCG CAGACCCCTCCACCGCGC TTTGCGCGGTCCCCC TERM 1567 3173308 - 3173335 + F 77 -12.6 -3.57144 | overlap 3173309 CGCTTTGCGCGGTCC CCCTCCCCGCGC TAAC GCGCAGGGAGGA TTTGGAAATAGAAGG TERM 1568 3173309 - 3173334 + F 81 -16.1 -2.74144 | overlap 3173308 GCTTTGCGCGGTCCC CCTCCCCGCGC TAAC GCGCAGGGAGG ATTTGGAAATAGAAG Swit_2888 3173365 - 3174069 + | 6-phosphogluconolactonase TERM 1569 3174156 - 3174213 + T 82 -14.2 -3.28712 | gap 3, overlap 3174157 3174212 GAATTCGAGGATCAC CGC-GTCGACGG-CAAGGCTGTCGCCGGC CTT GGCGGCGACGGCCTTGACCGT-GCCGGCC TTCTCGGCGCGCAGG TERM 1570 3174157 - 3174212 + T 86 -17.7 -2.57132 | gap 3, overlap 3174156 AATTCGAGGATCACC GC-GTCGACGG-CAAGGCTGTCGCCGGC CTT GGCGGCGACGGCCTTGACCGT-GCCGGC CTTCTCGGCGCGCAG Swit_2889 3176117 - 3174135 - | carbamoyl-phosphate synthase L chain, ATP-binding Swit_2890 3177255 - 3176239 - | biotin synthase Swit_2891 3179402 - 3177252 - | methylmalonyl-CoA mutase Swit_2892 3179859 - 3179434 - | methylmalonyl-CoA epimerase TERM 1571 3179559 - 3179512 - G 74 -11.1 -3.71848 | gap 1, overlap 3179514 3179517 CGGGTGGACGAAGAA GATCAGCGTGCCGTGCGCGCCG ATGCG CGGCTCGCCCAGCACGC-GCGC GCCCTTGCCCTCGAA TERM 1572 3179557 - 3179514 - G 73 -12.3 -3.44284 | gap 1, overlap 3179512 3179517 GGTGGACGAAGAAGA TCAGCGTGCCGTGCGCGCCG ATGCG CGGCTCGCCCAGCACGC-GC GCGCCCTTGCCCTCG TERM 1573 3179555 - 3179517 - G 84 -19.5 -2.87003 | overlap 3179514 3179512 GGACGAAGAAGATCA GCGTGCCGTGCGCGCCG ATGCG CGGCTCGCCCAGCACGC GCGCGCCCTTGCCCT Swit_2893 3181037 - 3179856 - | beta-ketothiolase Swit_2894 3182731 - 3181199 - | carboxyl transferase Swit_2895 3182881 - 3184302 + | XRE family transcriptional regulator Swit_2896 3184349 - 3184813 + | hypothetical protein Swit_2897 3185266 - 3184919 - | hypothetical protein Swit_2898 3186153 - 3185284 - | 3-hydroxyacyl-CoA dehydrogenase Swit_2899 3187338 - 3186190 - | putative iron-sulfur cluster binding protein Swit_2900 3187592 - 3188077 + | methionine-R-sulfoxide reductase TERM 1574 3188223 - 3188252 + T 100 -20.7 -4.05788 | opp_overlap 3188224, overlap 3188224 GGGAGGCAAAGAAAA AGCCCGGCCTCCC CGTG GGGAGGCCGGGCC TTTCGTTTCGCCGAA TERM 1575 3188251 - 3188224 - T 100 -24.2 -5.30616 | opp_overlap 3188223 3188224 GGAGGCAAAGAAAAA GCCCGGCCTCCC CGTG GGGAGGCCGGGC CTTTCGTTTCGCCGA TERM 1576 3188224 - 3188251 + T 100 -24.2 -3.03151 | opp_overlap 3188224, overlap 3188223 GGAGGCAAAGAAAAA GCCCGGCCTCCC CGTG GGGAGGCCGGGC CTTTCGTTTCGCCGA Swit_2901 3189143 - 3188277 - | cold-shock DNA-binding protein family protein Swit_2902 3189412 - 3190152 + | integral membrane protein TerC Swit_2903 3190223 - 3190840 + | 3'-5' exonuclease Swit_2904 3190974 - 3191669 + | hypothetical protein Swit_2905 3191669 - 3192190 + | OstA family protein Swit_2906 3192346 - 3193122 + | ABC transporter related Swit_2907 3193160 - 3194683 + | RNA polymerase factor sigma-54 TERM 1577 3194755 - 3194731 - T 83 -17.2 -2.52464 | opp_overlap 3194727, overlap 3194736 GGGGTGGGTAACGGA GACGAGGGGC TCGAC GCCCCTCGTC GGAGTTCTACGGGAT Swit_2908 3196102 - 3194843 - | Na+ dependent nucleoside transporter TERM 1578 3196145 - 3196131 - H 71 -11.4 -3.53444 | CCAGCCCGCCCGAAA GCGCCA CCA TGGCGC GGCGCCCGGCGCGGT Swit_2909 3196207 - 3196869 + | hypothetical protein TERM 1579 3196892 - 3196909 + F 72 -14.1 -2.79302 | overlap 3196896 TTCCCCAAGGCGTCG CCCCGGC GGAG GCCGGGG TCTCATGACGCTCCT Swit_2910 3197028 - 3197933 + | acetylglutamate kinase TERM 1580 3198050 - 3198082 + T 79 -13.4 -3.53012 | opp_overlap 3198059 CCTCGCTGAAGGGTA CGCAGTGAAGGGGC TCGAT GCCCCTTCACGGAG TTTCGCGGGAAGGCC TERM 1581 3198130 - 3198158 + T 84 -16.8 -3.07816 | gap 1, opp_overlap 3198148 TCGCCACCCACCCCC CGACCCCCTCCCT TGAA AGGGAGGGGG-CG TTCGCTCAATCCCGC Swit_2911 3198988 - 3198164 - | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Swit_2912 3199827 - 3198985 - | pyrimidine 5'-nucleotidase Swit_2913 3200241 - 3199867 - | iron-sulfur cluster assembly accessory protein Swit_2914 3200780 - 3200286 - | FeS assembly SUF system protein Swit_2915 3201991 - 3200777 - | cysteine desulfurase Swit_2916 3203070 - 3201988 - | SufBD protein Swit_2917 3203983 - 3203240 - | FeS assembly ATPase SufC Swit_2918 3205495 - 3204023 - | cysteine desulfurase activator complex subunit SufB Swit_2919 3205903 - 3205499 - | BadM/Rrf2 family transcriptional regulator TERM 1582 3206736 - 3206769 + G 77 -14.5 -3.15544 | gap 1 GCTGCTCGACGCGGT GACGG-CGGCGCGGCC GGC GGGCGGGCCGTCCGTC TTCCTGAAGGTCGCC Swit_2920 3206122 - 3207192 + | dihydroorotate dehydrogenase 2 Swit_2921 3208053 - 3207202 - | LysR family transcriptional regulator TERM 1583 3209391 - 3209343 - g 70 -12.2 -3.31144 | gap 1, opp_overlap 3209345 GCTCTATGTCGAGAA CGGGCTGACCCCGG-CGCAGGCG CTGT CGGCCGCGACCCGCGCCGGCCCG GCCTGGTTCGGCAAG Swit_2922 3208075 - 3209610 + | amidohydrolase Swit_2923 3209607 - 3210098 + | CMP/dCMP deaminase, zinc-binding TERM 1584 3210964 - 3211014 + GT 81 -16.1 -2.72344 | gap 2 CTGGCCGCCGCGCCC GCTGCCGCGCCGCTGCTCTGGGCGT GCT GCGCC-GGGGCGG-GGCTCGGCGGC TGCTTCGCGCTCACC TERM 1585 3211077 - 3211104 + GT 76 -13.4 -3.21099 | gap 1, overlap 3211079 TGCCGACGCCGGCGC GCTCGCCGCGCTG ATG CAGGGCGGCG-GC TTCCTGATCGCCGGG TERM 1586 3211079 - 3211103 + GT 71 -13.5 -2.52516 | overlap 3211077 CCGACGCCGGCGCGC TCGCCGCGCTG ATG CAGGGCGGCGG CTTCCTGATCGCCGG Swit_2925 3212855 - 3211242 - | EAL domain-containing protein Swit_2924 3210064 - 3211326 + | major facilitator transporter TERM 1587 3212957 - 3212928 - TR 100 -21.5 -3.46659 | opp_overlap 3212931, overlap 3212931 GATATTCATAACGAA GAAGGCCCGGAGC TTGC GCCCCGGGCCTTC CATCCTCTCCTGACC TERM 1588 3212931 - 3212954 + Tr 83 -15.2 -3.1211 | opp_overlap 3212928 3212931 ATTCATAACGAAGAA GGCCCGGAGC TTGC GCCCCGGGCC TTCCATCCTCTCCTG TERM 1589 3212954 - 3212931 - TR 100 -17.4 -3.86312 | opp_overlap 3212931, overlap 3212928 ATTCATAACGAAGAA GGCCCGGAGC TTGC GCCCCGGGCC TTCCATCCTCTCCTG Swit_2926 3214576 - 3212981 - | isocitrate lyase Swit_2927 3214831 - 3216474 + | diguanylate cyclase/phosphodiesterase TERM 1590 3216585 - 3216609 + F 93 -17.1 -3.53563 | overlap 3216586 ACCGCTGCGCGGTCC CCCTCCCCGGC GGG GCCGGGGAGGA TTTGGCAGCGGCTCT TERM 1591 3216586 - 3216608 + F 91 -20.6 -2.71924 | overlap 3216585 CCGCTGCGCGGTCCC CCTCCCCGGC GGG GCCGGGGAGG ATTTGGCAGCGGCTC Swit_2928 3216664 - 3217488 + | diaminopimelate epimerase Swit_2929 3217485 - 3218744 + | MiaB-like tRNA modifying enzyme Swit_2930 3218741 - 3219676 + | signal recognition particle-docking protein FtsY Swit_2931 3219673 - 3220299 + | intracellular septation protein A TERM 1592 3220959 - 3220973 + G 70 -12.8 -3.25823 | overlap 3220931 GCGTCGGAGGCGATG CGCGGC GAG GCCGCG TTGCTGTCGCACGAG Swit_2932 3220464 - 3221771 + | methyl-accepting chemotaxis sensory transducer TERM 1593 3221869 - 3221831 - T 100 -21.7 -4.13767 | GGCGCGAGGGCAAAA CCCGAGCGTCCCGCACG TCACG CGAGCGGGACGCCCAGG CTCCTGCGTGCCCTC Swit_2933 3222580 - 3221948 - | superoxide dismutase Swit_2934 3222783 - 3223349 + | membrane-like protein TERM 1594 3223407 - 3223369 - T 100 -19.7 -3.70902 | gap 1, opp_overlap 3223371 3223371 3223375, overlap 3223371 3223375 CGCTGGAGACGGAAA CAGG-AAGGGCCGGGGGA GCGA TCCCCCGGCCCTTTCCTT ATGAGCGGGGCACAT TERM 1595 3223371 - 3223404 + T 100 -24.7 -2.57132 | opp_overlap 3223369 3223371 3223375, overlap 3223371 3223375 CTGGAGACGGAAACA GGAAGGGCCGGGGGA GCGA TCCCCCGGCCCTTTC CTTATGAGCGGGGCA TERM 1596 3223371 - 3223405 + T 100 -22.3 -3.28712 | gap 1, opp_overlap 3223369 3223371 3223375, overlap 3223371 3223375 CTGGAGACGGAAACA GG-AAGGGCCGGGGGA GCGA TCCCCCGGCCCTTTCC TTATGAGCGGGGCAC TERM 1597 3223404 - 3223371 - T 100 -22.5 -3.43773 | opp_overlap 3223371 3223371 3223375, overlap 3223369 3223375 CTGGAGACGGAAACA GGAAGGGCCGGGGGA GCGA TCCCCCGGCCCTTTC CTTATGAGCGGGGCA TERM 1598 3223375 - 3223400 + T 100 -21.9 -3.9941 | opp_overlap 3223371 3223369 3223375, overlap 3223371 3223371 AGACGGAAACAGGAA GGGCCGGGGGA GCGA TCCCCCGGCCC TTTCCTTATGAGCGG TERM 1599 3223400 - 3223375 - T 100 -21.9 -3.47431 | opp_overlap 3223375 3223371 3223371, overlap 3223371 3223369 AGACGGAAACAGGAA GGGCCGGGGGA GCGA TCCCCCGGCCC TTTCCTTATGAGCGG TERM 1600 3223424 - 3223455 + T 80 -14.4 -3.14931 | opp_overlap 3223426 TGAGCGGGGCACATA AACGTCATCCCGGC GGAG GCCGGGATGACGGC TTGATGGGACGTCCG TERM 1601 3223453 - 3223426 - T 100 -21.4 -4.03413 | opp_overlap 3223424 AGCGGGGCACATAAA CGTCATCCCGGC GGAG GCCGGGATGACG GCTTGATGGGACGTC Swit_2935 3224242 - 3223481 - | hypothetical protein Swit_2936 3225288 - 3224239 - | sigma-54 dependent trancsriptional regulator TERM 1602 3225622 - 3225655 + H 71 -13.9 -2.52464 | gap 1, opp_overlap 3225610 TAAGCCGTGGCGTCC GGC-TCCGGCGGGTAT AGG ATGCCCACCGGACGCC TCCCTTCGAACCAGC Swit_2937 3225701 - 3226372 + | phage shock protein A, PspA Swit_2938 3226377 - 3226646 + | phage shock B family protein Swit_2939 3226685 - 3227065 + | phage shock protein C, PspC Swit_2940 3227213 - 3227530 + | hypothetical protein Swit_2941 3227548 - 3227805 + | hypothetical protein Swit_2942 3227830 - 3228084 + | hypothetical protein Swit_2943 3228100 - 3228345 + | hypothetical protein Swit_2944 3228376 - 3228825 + | Fe-S metabolism associated SufE Swit_2945 3228822 - 3229250 + | hypothetical protein TERM 1603 3229374 - 3229387 + F 74 -9.5 -3.91084 | GACGGCGGCACCGGA CGCGG ATTG CCGCG TTTCCTTCGCCATGC TERM 1604 3229448 - 3229482 + G 72 -13.4 -3.14132 | TCGATTCCGCCCCCG GCATCACCCGCGTCCG GCG CGGCGGCGGGTGGCGC TTCGTCGCCCCCGAC Swit_2946 3229399 - 3230358 + | topoisomerase IB-like protein Swit_2947 3230745 - 3230374 - | response regulator receiver protein TERM 1605 3230881 - 3230844 - R 70 -7.5 -4.07687 | gap 1 ATTCGGTTCCCAAAA GGGGATCGGC-CCCGCGC TCA GCGCGGCCGGCGCTCCTC CGCGCGCCGCAGCAC Swit_2948 3231391 - 3230861 - | heat shock protein DnaJ domain-containing protein Swit_2949 3231553 - 3233328 + | AMP-dependent synthetase and ligase TERM 1606 3233722 - 3233737 + F 76 -7.6 -4.3467 | opp_overlap 3233718 3233722 TGAAGCGAAAATGAA CTCATG ATTT CATGAG TTTTACTATCACCGT TERM 1607 3235782 - 3235760 - g 70 -14.8 -2.79183 | TCGACCTGTACGATA CCGCGTCGGG CAG CCCGACGCTG GGCAGCCACATCGAG Swit_2950 3233818 - 3236370 + | TonB-dependent receptor, plug TERM 1608 3236386 - 3236439 + F 100 -30.3 -4.57073 | overlap 3236387 3236431 3236433 TCGTTCCGATCTTAC CCCGGACCGCCGGGCCCCTCTCCGC GACG GCGGGGATGGGTCCGGCGGTTCGGC TTTTTCGGCGAACTG TERM 1609 3236387 - 3236438 + F 100 -33.8 -3.33922 | overlap 3236386 3236431 3236433 CGTTCCGATCTTACC CCGGACCGCCGGGCCCCTCTCCGC GACG GCGGGGATGGGTCCGGCGGTTCGG CTTTTTCGGCGAACT TERM 1610 3237538 - 3237591 + G 82 -17.3 -3.01416 | TGCTTCGTCGTCCCC GCCGGGCTGTGCGTGGCGCTCGC CTGGATGC GCGAGCGCCACGCCGTGCTCGAC TATCTCTACGTCCTG Swit_2951 3236614 - 3237615 + | acyltransferase 3 Swit_2952 3239725 - 3237638 - | peptidase S9 prolyl oligopeptidase Swit_2953 3241165 - 3239810 - | integral membrane sensor signal transduction histidine kinase Swit_2954 3241842 - 3241162 - | two component transcriptional regulator TERM 1611 3241959 - 3241942 - H 74 -14.1 -2.87132 | TGTCCGGTTCAGAGA CGGCCCG CGAA CGGGCCG AAAAGGCCGTGCGGG Swit_2955 3242089 - 3242727 + | hypothetical protein Swit_2956 3243350 - 3242889 - | MarR family transcriptional regulator TERM 1612 3243009 - 3243035 + g 75 -15.8 -2.91582 | TTCGGGCGGCAGGCA GGCTGCGTCGTC GCC GGCGGCGCGGCC TCTGTCGGTCAGGTG Swit_2957 3243489 - 3243914 + | OsmC family protein TERM 1613 3244056 - 3244114 + F 91 -17.8 -3.21395 | opp_overlap 3244054 3244049 3244056, overlap 3244096 GGGAAAACTTAAACA CGGACT-ATCTCACTCCGCGTTTTATGC TTGAC GCATCAAACGCGGAGTGT-ATGAGTCCG TGTTATGGCGCACAT TERM 1614 3244114 - 3244056 - f 100 -19.7 -3.54879 | opp_overlap 3244056 3244096, overlap 3244054 3244049 GGGAAAACTTAAACA CGGACTATCTCACTCCGCGTTTTATGC TTGAC GCATCAAACGCGGAGTGTATGAGTCCG TGTTATGGCGCACAT TERM 1615 3244517 - 3244496 - g 86 -12.3 -4.11216 | gap 1 GCTCCAGGCCGAAAA GGCGATGCGC GAC GCGC-TCGCC GCCCAGTCGCTCCAG Swit_2958 3244119 - 3244658 + | BadM/Rrf2 family transcriptional regulator Swit_2959 3244778 - 3246013 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Swit_2960 3246553 - 3246023 - | hypothetical protein TERM 1616 3246529 - 3246490 - G 71 -10.6 -3.75153 | overlap 3246491 CGGGCGGAAGCGAAA TGTTCTCGTCATCCCGGC CTCC GCCGGGATGACGGGGATG CGCGTCGCCGTTGAC TERM 1617 3246741 - 3246792 + G 71 -10.9 -3.64487 | gap 3, overlap 3246742 3246788 CGAGGGGCTGCACCA TGCGATCGCCGAGGCGCATGCG-GCC CAG GGCGTGC-TGCGCTTCG-CGCTCGCC TTCTTCGCGATCTGG Swit_2961 3246601 - 3247770 + | low temperature requirement A TERM 1618 3248761 - 3248739 - g 70 -9 -3.8917 | GCTCAAGGACAAGAA CGACCGCGAC GAG GACGCGCTCG AGCTGGTCCGCCTGA Swit_2962 3247828 - 3249036 + | radical SAM protein Swit_2964 3249457 - 3250683 + | cyclopropane-fatty-acyl-phospholipid synthase Swit_2965 3250725 - 3251048 + | hypothetical protein Swit_2966 3251932 - 3251219 - | oxidoreductase TERM 1619 3251887 - 3251859 - G 82 -14.5 -3.53012 | overlap 3251836 3251838 CCGGCGCCGGCGAAA CGGCGGACCAGCG CGG CGCCGATCCCCCG GCTGCCGCCGAGGAC Swit_2967 3252005 - 3252601 + | TetR family transcriptional regulator TERM 1620 3252651 - 3252624 - T 100 -9 -5.41746 | overlap 3252625 AATCCGCCAAAAAAA CGTCACCCCGGC GGAG GCCGGGGTCTCA GGAGATGAGCGCTGC TERM 1621 3252650 - 3252625 - T 76 -10.3 -3.83963 | overlap 3252624 ATCCGCCAAAAAAAC GTCACCCCGGC GGAG GCCGGGGTCTC AGGAGATGAGCGCTG Swit_2968 3253347 - 3252718 - | calcium-binding EF-hand-containing protein Swit_2969 3254040 - 3253561 - | hypothetical protein Swit_2970 3254157 - 3255374 + | argininosuccinate synthase TERM 1622 3255474 - 3255460 - T 71 -12.8 -3.01791 | ATCCGCCCGGGAAGA GGCGCC TAC GGCGCC ACCCCTCCACCGCCT Swit_2971 3257099 - 3255465 - | membrane-like protein TERM 1623 3255500 - 3255526 + g 100 -12.2 -5.72622 | overlap 3255501 CGCCTTCGGCGGTCC CCCTCCCCGAGC TGC GCTCAGGGAGGA TTTTTTGTTTCTGGC TERM 1624 3255501 - 3255525 + g 95 -15.7 -4.01946 | overlap 3255500 GCCTTCGGCGGTCCC CCTCCCCGAGC TGC GCTCAGGGAGG ATTTTTTGTTTCTGG TERM 1625 3256411 - 3256367 - G 86 -18.6 -3.18023 | overlap 3256365 3256368 CGAGCAGGATGAACA GCGCCGGCAGCCACAGCGC-GA TCG CCAGCGC-GTGGCCGCCGGCGA ACCACAGCCAGTCGG TERM 1626 3256410 - 3256368 - G 86 -22.1 -2.50492 | overlap 3256367 3256365 GAGCAGGATGAACAG CGCCGGCAGCCACAGCGC-GA TCG CCAGCGC-GTGGCCGCCGGCG AACCACAGCCAGTCG Swit_2972 3258125 - 3257169 - | transposase IS116/IS110/IS902 family protein TERM 1627 3258273 - 3258296 + H 86 -18.2 -2.62184 | GCCTTGCCGCCACGA GCTGCGGGGT GGCC ACCCCGCAGC TCGTCTCGCCAGCCA TERM 1628 3258360 - 3258343 - H 73 -11.3 -3.58726 | overlap 3258354 3258355 TTTCCCGAGAGACAA TTCCCGC GAAA GCGGGAA TCCACGGTCACGTAG Swit_2973 3258514 - 3259623 + | signal transduction histidine kinase, LytS Swit_2974 3259620 - 3260420 + | LytTR family two component transcriptional regulator TERM 1629 3260450 - 3260424 - f 72 -12.2 -3.35679 | overlap 3260425 TTCGTCCATTGATAA TTCCTCCCCTGC GAT GCAGGGGAGGGG GACCACCCGCAGGGT TERM 1630 3260449 - 3260425 - f 77 -15.7 -2.61264 | overlap 3260424 TCGTCCATTGATAAT TCCTCCCCTGC GAT GCAGGGGAGGG GGACCACCCGCAGGG Swit_2975 3260437 - 3261414 + | Citryl-CoA lyase TERM 1631 3263776 - 3263796 + G 74 -15.4 -3.09492 | AGATGTCGGCAACCT CGGCGCCG GACGG CGGCGCCG TCTTCCGCTTCACCC Swit_2976 3261765 - 3263843 + | PAS/PAC sensor signal transduction histidine kinase Swit_2977 3263840 - 3264466 + | response regulator receiver protein TERM 1632 3264921 - 3264948 + G 73 -12.8 -3.40403 | gap 1, overlap 3264927 GCTGATCGAGAGCGC GGTGAAG-GGCGG GGT CCGCCACTTCATC TTCTCGTCGACCGCC Swit_2978 3264574 - 3265593 + | UDP-galactose 4-epimerase TERM 1633 3265680 - 3265664 - f 84 -13.7 -3.81951 | opp_overlap 3265679 GGGGAGATGAGGAAA CGGAGCC GCA GGCTCCG CAAGCGCGAACGCGC TERM 1634 3265739 - 3265722 - f 74 -12.7 -3.30701 | overlap 3265717 TGCGAGGAAAGCCAA GCGAGGC GGAT GCCTCGC GCCCGGCGCCTGAGG TERM 1635 3265794 - 3265770 - f 100 -13.5 -6.09196 | overlap 3265771 GCCAAAACAAAAAAA GGGCCGATCCC GAG GGGACCGGCCT TGAAAGTTTTAGGAG TERM 1636 3265793 - 3265771 - f 100 -17 -4.23077 | overlap 3265770 CCAAAACAAAAAAAG GGCCGATCCC GAG GGGACCGGCC TTGAAAGTTTTAGGA TERM 1637 3265906 - 3265889 - f 74 -5.7 -4.42806 | overlap 3265897 GCACCGCCAAATAAA TTTTCAA ACTA TTGAAAA ATAGCAGTTTATTAT Swit_2979 3266048 - 3268024 + | OPT family oligopeptide transporter Swit_2980 3268112 - 3268675 + | elongation factor P TERM 1638 3268712 - 3268681 - f 71 -9.2 -3.76224 | overlap 3268682 3268685 CGCGGACTGATCAAA GCTATGCCGGGGGC ATGA GCCCCCGGCTCGTC ACCCACCCCTAGCCC TERM 1639 3268708 - 3268685 - f 77 -15.2 -2.68279 | overlap 3268682 3268681 GACTGATCAAAGCTA TGCCGGGGGC ATGA GCCCCCGGCT CGTCACCCACCCCTA Swit_2981 3268757 - 3269578 + | inositol-phosphate phosphatase Swit_2982 3269858 - 3270235 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Swit_2983 3270226 - 3270789 + | NADH dehydrogenase subunit B TERM 1640 3271421 - 3271397 - g 73 -12.7 -3.40403 | overlap 3271378 GCCCGGCGACGAGAA GGCCGAGGGCG AAG CGCCCACGGGC GACGGAGCGAAGAAG Swit_2984 3270786 - 3271439 + | NADH (or F420H2) dehydrogenase, subunit C Swit_2985 3271561 - 3272781 + | NADH dehydrogenase subunit D Swit_2986 3272781 - 3273470 + | NADH-quinone oxidoreductase, E subunit Swit_2987 3273467 - 3273616 + | hypothetical protein TERM 1641 3273712 - 3273695 - f 72 -14.1 -2.78384 | opp_overlap 3273690 3273687 GCTTGCCGCACGAGA CCCCGGC CTCC GCCGGGG CTCCGCTTCTCGGGG Swit_2988 3273737 - 3275035 + | NADH dehydrogenase I subunit F Swit_2989 3275032 - 3275724 + | hypothetical protein Swit_2990 3275730 - 3276410 + | hypothetical protein Swit_2991 3276410 - 3278413 + | NADH dehydrogenase subunit G Swit_2992 3278410 - 3279456 + | NADH dehydrogenase (quinone) Swit_2993 3279458 - 3279943 + | NADH dehydrogenase subunit I Swit_2994 3279979 - 3280590 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 TERM 1642 3280632 - 3280606 - f 93 -13.6 -4.12188 | overlap 3280607 TGACGACCTTCAAAA TCCTCCCTGCGC ACA GCGCGGGGAGGG GGAGCAGCCGCAGGC TERM 1643 3280631 - 3280607 - f 88 -17.1 -3.06991 | overlap 3280606 GACGACCTTCAAAAT CCTCCCTGCGC ACA GCGCGGGGAGG GGGAGCAGCCGCAGG TERM 1644 3280657 - 3280676 + F 73 -12.8 -3.14132 | GCAGGCTGGTGGAGG GGCGCCGC GCCA GCGGCGTC TTCGTCGCCGCCCCC TERM 1645 3280714 - 3280740 + F 73 -10.8 -3.56092 | overlap 3280715 CACTACGTGCGGTCC CCCTCCCCATGC TGC GCATAGGGAGGA TTTAAGAGATGATCG TERM 1646 3280715 - 3280739 + F 75 -14.3 -2.73441 | overlap 3280714 ACTACGTGCGGTCCC CCTCCCCATGC TGC GCATAGGGAGG ATTTAAGAGATGATC Swit_2995 3280749 - 3281054 + | NADH-ubiquinone oxidoreductase, chain 4L Swit_2996 3281062 - 3283113 + | NADH dehydrogenase subunit L Swit_2997 3283118 - 3284644 + | proton-translocating NADH-quinone oxidoreductase, chain M Swit_2998 3284644 - 3286089 + | NADH dehydrogenase subunit N Swit_2999 3286141 - 3286926 + | biotin--acetyl-CoA-carboxylase ligase TERM 1647 3287452 - 3287397 - g 70 -12.4 -3.28924 | gap 1, overlap 3287398 TAGCGGCGCCTACAA GGGCGG-GATCATCGCGCCGGGCATCA ACC TGTCGCTCGACGCGCTGGTCGCCGCCG CCGCGAAGCTGCCCC TERM 1648 3287451 - 3287398 - g 73 -15.9 -2.57211 | gap 1, overlap 3287397 AGCGGCGCCTACAAG GGCGG-GATCATCGCGCCGGGCATCA ACC TGTCGCTCGACGCGCTGGTCGCCGCC GCCGCGAAGCTGCCC Swit_3000 3286957 - 3287739 + | pantothenate kinase Swit_3001 3287761 - 3289401 + | beta-lactamase domain-containing protein TERM 1649 3289425 - 3289451 + G 70 -3.6 -4.4648 | overlap 3289426 GCCAGCCGATGAAGC TCAGCTCGATCG TCG CGATCTACCTGC TTTTCTGGTGGGGCT Swit_3002 3289418 - 3289687 + | hypothetical protein TERM 1650 3289714 - 3289690 - T 85 -14.3 -3.55444 | overlap 3289691 CCGCGACGCCTGAAA TCCTCCCCATC GCA GATGGGGAGGG GGACCATCCGCAGGA TERM 1651 3289713 - 3289691 - T 86 -17.8 -2.73124 | overlap 3289690 CGCGACGCCTGAAAT CCTCCCCATC GCA GATGGGGAGG GGGACCATCCGCAGG TERM 1652 3289793 - 3289819 + T 100 -18 -3.76373 | overlap 3289794 CGCCTTCGGCGGTCC CCCTCCCCACGC TTT GCGTGGGGAGGA TTTGAATCTTACGGC TERM 1653 3289794 - 3289818 + T 100 -21.5 -2.85503 | overlap 3289793 GCCTTCGGCGGTCCC CCTCCCCACGC TTT GCGTGGGGAGG ATTTGAATCTTACGG Swit_3003 3291504 - 3289828 - | peptidase M28 TERM 1654 3290425 - 3290373 - G 74 -16.8 -2.77701 | gap 1, opp_overlap 3290403, overlap 3290370 AGGCGAGGAAGATCA GCGAGCGGCGGGGCGCGACCGGCGC CTCG GCGGCGG-CGCGCGCCACCTCCAGC ATCGTCGCGATGCCG TERM 1655 3290403 - 3290461 + g 82 -13.7 -3.7282 | gap 2, opp_overlap 3290373 3290370, overlap 3290439 CGACCGGCGCCTCGG CGGCG-GCGCG-CGCCACCTCCAGCATCG TCG CGATGCCGGCGGCGTTGTCGAGCGCGCCG TTGTTGATCCGGTCG Swit_3004 3292314 - 3291727 - | methionine biosynthesis protein MetW metX 3293447 - 3292311 - | homoserine O-acetyltransferase Swit_3006 3293656 - 3294762 + | histidinol-phosphate aminotransferase Swit_3007 3294762 - 3295667 + | cyclohexadienyl dehydrogenase TERM 1656 3296139 - 3296100 - g 74 -15 -3.05844 | overlap 3296112 GCGTCGAGGCGAACA TCGACCTCAACACCGCCG ATGC CGGCGGGATCGAGGCCAA GTGGGGCTGGGGCGT Swit_3008 3295877 - 3296395 + | hypothetical protein TERM 1657 3296405 - 3296434 + F 93 -18.6 -3.33696 | opp_overlap 3296403 3296402 TTCTGATCGAAACGG GGAGGGCGCCGG GCGGGA CCGGCGTCCTCC TTCCTTCACGGCCCG Swit_3009 3296678 - 3297007 + | small multidrug resistance protein Swit_3010 3297773 - 3297087 - | phospholipid/glycerol acyltransferase Swit_3011 3298306 - 3297773 - | hypothetical protein Swit_3012 3299214 - 3298303 - | hypothetical protein Swit_3013 3299921 - 3299214 - | cell division ATP-binding protein FtsE Swit_3015 3301038 - 3302138 + | pyrophosphate-dependent phosphofructokinase Swit_3016 3303048 - 3302671 - | hypothetical protein Swit_3017 3304528 - 3303092 - | aldehyde dehydrogenase Swit_3018 3305646 - 3304525 - | alcohol dehydrogenase Swit_3019 3306212 - 3305670 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1658 3306235 - 3306256 + r 83 -15.1 -3.20227 | overlap 3306234 TCTCCCGAATCCTGT CGGCCGGTC CTTG GGCCGGCCG TATTGGTCATTGCAA Swit_3020 3307309 - 3306263 - | malate/L-lactate dehydrogenase Swit_3021 3308191 - 3307313 - | peptidase S15 Swit_3022 3309086 - 3308238 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase TERM 1659 3309139 - 3309150 + r 91 -3.6 -5.41143 | CTCCGTTCCGATAAT CGGT CGTA GCCG TTTTTTTCGAAAATA Swit_3023 3310075 - 3309365 - | GntR family transcriptional regulator Swit_3024 3311196 - 3310111 - | vanillate monooxygenase TERM 1660 3310608 - 3310588 - G 71 -9.7 -3.68222 | CTTGAACGCGAAGAA GTCGATCAG TTG CTGATCGCC GGTCGCCCTCACCGT Swit_3025 3312398 - 3311223 - | cytochrome P450 Swit_3026 3312930 - 3312400 - | cupin 2 domain-containing protein TERM 1661 3312958 - 3312935 - R 80 -16 -2.64735 | opp_overlap 3312939 3312943 3312945 ACGCGACGCATATCA GCCCCTCCCG CGAT CGGGAGAGGC GATGCCCTCCCCCGA Swit_3027 3315538 - 3312983 - | TonB-dependent receptor TERM 1662 3315961 - 3315934 - R 83 -15.5 -3.23216 | GCCGATCATGACCAA GGCGGCGGCGC TCCCAT GCTCCGCCGCC GCTAATGATCACGAT Swit_3028 3316185 - 3316015 - | hypothetical protein Swit_3029 3317468 - 3316782 - | CRP/FNR family transcriptional regulator Swit_3030 3317539 - 3321048 + | indolepyruvate ferredoxin oxidoreductase Swit_3031 3321499 - 3321008 - | AsnC family transcriptional regulator TERM 1663 3321777 - 3321797 + G 82 -11.1 -4.11394 | overlap 3321778 GACGGACTATGTTGC AGGTGCTCG CAG CGAGCACCA TTTTGACGGTGGGAT TERM 1664 3321778 - 3321796 + G 74 -14.6 -3.06515 | overlap 3321777 ACGGACTATGTTGCA GGTGCTCG CAG CGAGCACC ATTTTGACGGTGGGA Swit_3032 3321758 - 3324382 + | TonB-dependent receptor TERM 1665 3324440 - 3324402 - T 71 -8.7 -3.91084 | opp_overlap 3324407, overlap 3324403 TCATCCCCAAGGAAA CTTCACCCTGCCGGCAC ACTCG GTGCCGGCAGGGTTTTC TTTTGCTCAGTCCCG TERM 1666 3324407 - 3324435 + T 100 -21.8 -5.13722 | opp_overlap 3324403 3324402 CCCAAGGAAACTTCA CCCTGCCGGCAC ACTCG GTGCCGGCAGGG TTTTCTTTTGCTCAG Swit_3033 3325781 - 3324447 - | major facilitator transporter TERM 1667 3325005 - 3324982 - G 75 -5.2 -4.57073 | overlap 3324984 3324985 TAGCCTTGGCAAAAA TAGCTCGCCG ACAG CAGCGAGACA TCCCGTCGCAGCACC Swit_3034 3326025 - 3327326 + | aminotransferase Swit_3035 3327323 - 3327727 + | endoribonuclease L-PSP TERM 1668 3328807 - 3328831 + G 91 -8.4 -4.86731 | CATGTGCTTGCCGGT GGCGGCCCGG ATGCG CGGGGCGGCC TTTTCTTTCGGCCGA Swit_3036 3327724 - 3329190 + | aldehyde dehydrogenase Swit_3037 3329225 - 3331081 + | dihydroxyacid dehydratase Swit_3038 3332473 - 3331094 - | L-serine ammonia-lyase Swit_3039 3333746 - 3332487 - | hypothetical protein TERM 1669 3334248 - 3334222 - g 74 -12.2 -3.65902 | opp_overlap 3334238 3334244 GGGAGGTGAGTGAAA GCCGCTGGGCGC CTG ACGGCCAGCAGC TCGCCATCATTGCGA Swit_3040 3333954 - 3335990 + | peptidase S9 prolyl oligopeptidase Swit_3041 3335993 - 3337201 + | amidohydrolase Swit_3042 3337940 - 3337416 - | MarR family transcriptional regulator Swit_3043 3339653 - 3337971 - | sulfatase TERM 1670 3338312 - 3338350 + g 73 -15.9 -2.64735 | CCGGTTTCCTTGCGC TGCTGGCCGGGCCCGCC GCCAG GGCGAGCGCGGTCGGCA TCATGTCGGTGACGT TERM 1671 3339195 - 3339221 + g 71 -10.8 -3.53811 | overlap 3339211 GTGCGCCTTGGGCGA TTGCTTCTCGGC ATA GCCGAGATGCCA TTTCCCGGCCATCGC Swit_3044 3341974 - 3339647 - | TonB-dependent receptor TERM 1672 3340153 - 3340175 + g 71 -11.3 -3.61517 | gap 1 TCTCTAGCTCGATAC CG-CGCGAGC GCAT GCTCGCGGCG TTGTTGACGACCGAT TERM 1673 3340591 - 3340601 + g 70 -8.2 -3.8211 | overlap 3340571 TGCCGATCACCGCCT GGCG ATG CGCC TTCTTCTCGATCCGC Swit_3045 3343882 - 3342080 - | monooxygenase, FAD-binding Swit_3046 3344827 - 3343931 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1674 3344275 - 3344252 - G 72 -4.4 -4.56597 | opp_overlap 3344259 3344272, overlap 3344253 3344272 CCGGGTGTGGAAAAA GGCCGCCTCG ACGT CGAAGATGCC GTTCGGCATCGGTTG TERM 1675 3344899 - 3344928 + r 82 -14.3 -3.29144 | gap 1, opp_overlap 3344869 GCCGCGACGAGCGGG GGAAGGGGCGCGAC CAT GT-GCGCCCCGTCC TTGTCGAGCGGATCG Swit_3047 3345716 - 3344880 - | phytanoyl-CoA dioxygenase Swit_3048 3348110 - 3345738 - | TonB-dependent receptor TERM 1676 3347151 - 3347184 + g 70 -13.1 -3.28712 | gap 1 GTCGTGGCGGCCATA GTCGCGTCCGGGCG TCCAATC CGCCCGG-CGCGCC TTGTCCGGCGCCGAC TERM 1677 3347541 - 3347565 + g 71 -10.7 -3.62046 | ATAGCCGATCTTGCC GCCGGCCGA GAAATGG TCGGTCGGC TTGTTGGCGACATAG Swit_3049 3348491 - 3348201 - | hypothetical protein TERM 1678 3348278 - 3348261 - G 75 -5.5 -4.58395 | overlap 3348264 GTGAGTCTCGAAAAA GACGTCC GAGC GCACGTC GTCGCCGGTCACGAT Swit_3050 3349939 - 3348566 - | IS4 family transposase TERM 1679 3349316 - 3349295 - G 73 -7.1 -4.11216 | opp_overlap 3349309, overlap 3349296 GCTGTAGGCGTAAAA GGCCGCCTC GCGC GTGGCGGCG GTCCAGCGCGAGGCT Swit_3051 3349960 - 3350199 + | hypothetical protein Swit_3052 3351031 - 3350303 - | IstB ATP binding domain-containing protein Swit_3053 3352523 - 3351018 - | integrase catalytic subunit TERM 1680 3351995 - 3351978 - G 75 -8.3 -4.21141 | GCCGAAGAAAGCAAA GCCGCGC GCAT GCGCGTC GAACAGCATCTCCTG Swit_3054 3352985 - 3352605 - | TetR family transcriptional regulator Swit_3055 3353287 - 3354120 + | alpha/beta hydrolase fold Swit_3056 3354158 - 3355420 + | Rieske (2Fe-2S) domain-containing protein Swit_3057 3355417 - 3355893 + | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_3058 3355913 - 3356533 + | maleylacetoacetate isomerase Swit_3059 3356580 - 3357629 + | gentisate 1,2-dioxygenase Swit_3060 3357651 - 3358334 + | fumarylacetoacetate (FAA) hydrolase Swit_3061 3358509 - 3359795 + | hypothetical protein Swit_3062 3359837 - 3361132 + | phthalate 4,5-dioxygenase Swit_3063 3361164 - 3362165 + | amidohydrolase 2 Swit_3064 3362184 - 3363206 + | protocatechuate 4,5-dioxygenase subunit beta Swit_3065 3363209 - 3363877 + | demethylmenaquinone methyltransferase-like protein Swit_3066 3363877 - 3364527 + | dimethylmenaquinone methyltransferase TERM 1681 3364776 - 3364834 + G 72 -8.8 -4.0162 | gap 3, opp_overlap 3364770, overlap 3364776 3364816 GGGAAGCGATCGGAC G-CTTGCCG-GTCGCGACGCGCGC-CGAT CTCG ATCGCGCGCTCGACGCCGCGCGGCGGGGC TTTGTGGTCTGGCGC Swit_3067 3364658 - 3366115 + | succinate semialdehyde dehydrogenase Swit_3068 3366119 - 3366880 + | short-chain dehydrogenase/reductase SDR Swit_3069 3366915 - 3368183 + | cytochrome P450 Swit_3070 3368844 - 3368209 - | dimethylmenaquinone methyltransferase Swit_3071 3370212 - 3369403 - | glutathione S-transferase domain-containing protein TERM 1682 3369463 - 3369481 + g 72 -6.6 -4.25104 | TCGCCCGCGCGCTCT TGCGCTGG GCG CCGGCACA TTTTCCTCGAAGGCG Swit_3072 3370709 - 3370272 - | thioesterase-like protein fabG 3371466 - 3370714 - | 3-ketoacyl-(acyl-carrier-protein) reductase Swit_3074 3373232 - 3371463 - | hydantoinase B/oxoprolinase Swit_3075 3375286 - 3373232 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 1683 3374487 - 3374466 - G 70 -12.3 -3.28712 | gap 1, opp_overlap 3374473 TCGCGCTCGGCATAA TGGCTGCCGG CGA CCGGC-GCCA TCGACGGGCCGCTGT TERM 1684 3375388 - 3375360 - R 93 -8.7 -5.1417 | overlap 3375362 CGACAAAAGGAAAAA CGGGTTCGTTCCG GCC CGGCCCGAACCGG ATCGGATCAGGTCTA Swit_3076 3376333 - 3375401 - | hypothetical protein Swit_3077 3377667 - 3376342 - | major facilitator transporter Swit_3078 3378434 - 3377667 - | short-chain dehydrogenase/reductase SDR TERM 1685 3378190 - 3378150 - G 70 -8.2 -3.90744 | gap 1, overlap 3378152 3378153 CGGCGTCGGAAAGAA CACCCCGGCGGCGTTGACC AGCA GGTCCACCCCGCCGAA-CG CCTCGGCCACCTGCC Swit_3079 3379552 - 3378431 - | beta-lactamase Swit_3080 3381714 - 3379582 - | TonB-dependent receptor TERM 1686 3381556 - 3381589 + g 74 -12.3 -3.63515 | overlap 3381559 GAACGCGGTGATCGC GAGGGGCGTGTCCTG CAGG CGGGTCGCGCCCGTC TTGTTGGCCGTGACG Swit_3081 3382591 - 3381869 - | GntR family transcriptional regulator Swit_3082 3382613 - 3383374 + | integrase catalytic subunit Swit_3083 3384441 - 3383407 - | ornithine cyclodeaminase Swit_3084 3385379 - 3384438 - | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Swit_3085 3385430 - 3386392 + | LysR family transcriptional regulator Swit_3086 3386506 - 3387606 + | gentisate 1 2-dioxygenase-like protein Swit_3087 3388400 - 3387609 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 1687 3387934 - 3387899 - G 80 -16.9 -3.13522 | overlap 3387897 ACGGGCCGATGAAGA TGCCGTCGACCCCCG GAAGCT CGGCGATCGACGGCA GGGCGGCCAGAGCGG Swit_3088 3389244 - 3388444 - | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 1688 3389401 - 3389418 + H 78 -7 -4.57073 | opp_overlap 3389392 3389395 GAAAACCAGCAGGTC GCCGAT CTCGTC ATCGGC TTTTTCCGGGCGCTC Swit_3090 3389934 - 3391148 + | acyl-CoA dehydrogenase type 2 Swit_3091 3391484 - 3393823 + | TonB-dependent receptor TERM 1689 3393830 - 3393860 + F 79 -15.4 -2.94099 | CATTTCTAACGGCGC CGGCCCGCGACC GTCATCG GGTCGCGGGCCA TGTCTGCTAGACGGG TERM 1690 3394877 - 3394867 - g 79 -2.4 -4.82901 | GCGGCGCGACAAAAA TGCC TTC GGCC ATGACGTCGACCAGT Swit_3092 3393860 - 3395203 + | hypothetical protein Swit_3093 3395241 - 3396173 + | hypothetical protein Swit_3094 3396291 - 3396986 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1691 3397036 - 3397064 + G 70 -14.7 -2.80575 | overlap 3397026 3397038 ACCGGCGATGCCCGG GATCGCGGATC AACTGGC GATCCGCGATC TCTCCTGGCGGTTTT Swit_3095 3397007 - 3397429 + | hypothetical protein Swit_3096 3397633 - 3399942 + | ferredoxin Swit_3097 3403051 - 3399953 - | hypothetical protein TERM 1692 3400881 - 3400868 - G 78 -5.9 -4.56597 | overlap 3400869 GCCGCGCTCGAAAAA CCGCA TCGC CGCGG CGTCCGTCACCAACG Swit_3098 3406548 - 3403060 - | ankyrin TERM 1693 3406619 - 3406639 + r 74 -5.4 -4.58685 | gap 1, opp_overlap 3406612, overlap 3406619 3406620 CGGTAGAATCCGATT C-GGAGCGC TGGA GCGTTCCCG TTTTTGCCGCGATTT Swit_3099 3407360 - 3406692 - | TetR family transcriptional regulator Swit_3100 3408975 - 3407464 - | hypothetical protein Swit_3101 3409871 - 3408972 - | polysaccharide deacetylase Swit_3102 3410572 - 3409859 - | glutamine amidotransferase class-I Swit_3103 3412749 - 3410572 - | TonB-dependent receptor TERM 1694 3412922 - 3412873 - R 79 -11.5 -3.88559 | opp_overlap 3412873 3412882 3412897, overlap 3412879 AATGACTCTCACAAA TCCAAACACTGGTCAACTGTCCA TTAT TGGTCATGAGACCAGTATTTGGA TTTCGAGGAGGCGCG Swit_3104 3413726 - 3413016 - | hypothetical protein TERM 1695 3413900 - 3413917 + G 75 -8.3 -4.15106 | overlap 3413905 3413915 GCGCGGCTGGAGGCG GCGGCGC CGGA GCGCGGC TTTTCGGCCTTCCTC Swit_3105 3413747 - 3414721 + | hypothetical protein Swit_3106 3415856 - 3414729 - | hemolysin-type calcium-binding region uvrA 3419242 - 3416276 - | excinuclease ABC subunit A Swit_3108 3420184 - 3419615 - | ATP:cob(I)alamin adenosyltransferase Swit_3109 3420428 - 3420198 - | hypothetical protein TERM 1696 3420581 - 3420604 + r 91 -12.4 -4.25052 | overlap 3420579 3420582 CGCCACCCACCCCTT CCCCCTCCCT TGAA AGGGAGGGGC TTATTGTTTTGCTCT TERM 1697 3420582 - 3420603 + r 83 -15.9 -3.13405 | overlap 3420581 3420579 GCCACCCACCCCTTC CCCCTCCCT TGAA AGGGAGGGG CTTATTGTTTTGCTC Swit_3110 3421459 - 3420605 - | glutamyl-tRNA synthetase, class Ic TERM 1698 3421745 - 3421759 + G 100 -8.5 -5.41143 | opp_overlap 3421745 TGTGGAACTGGCAAA CCGCC ATCAA GGCGG TTTTTTTGGAACGTG Swit_3111 3421636 - 3422202 + | HNH endonuclease TERM 1699 3422376 - 3422348 - g 78 -13.7 -3.65046 | CCGCGACGGCAACAA CCGCCGCGCCATG CCG CGCGGGGCGGCGG CCTTCGACACCCGCT Swit_3112 3422310 - 3422753 + | type IV pilus assembly PilZ Swit_3113 3423898 - 3422756 - | peptidase M14, carboxypeptidase A Swit_3114 3424644 - 3423895 - | hypothetical protein Swit_3115 3424806 - 3424931 + | 50S ribosomal protein L36P TERM 1700 3425045 - 3425026 - g 90 -13.6 -4.08216 | opp_overlap 3425018 3425026 GCAGTTCTTCGAAAA GCTCGTGC CCGC GCACGAGC TCGAACTGTTTCTGC Swit_3116 3424988 - 3425569 + | HAD family hydrolase Swit_3117 3425647 - 3425757 + | hypothetical protein TERM 1701 3425824 - 3425879 + F 100 -24.7 -4.78764 | overlap 3425825 CGCTGCCGTAGTTTC ACCGCTCCTCCGCCCGATCCCCGTG CCGACA TGCGGGGACCGGGTGGGGGAGCGGG TTTTTCGTCCGTTTC TERM 1702 3425825 - 3425878 + F 100 -28.2 -3.46174 | overlap 3425824 GCTGCCGTAGTTTCA CCGCTCCTCCGCCCGATCCCCGTG CCGACA TGCGGGGACCGGGTGGGGGAGCGG GTTTTTCGTCCGTTT Swit_3118 3426028 - 3426396 + | hypothetical protein TERM 1703 3426394 - 3426448 + T 74 -9.1 -3.90744 | gap 2, opp_overlap 3426393 3426392, overlap 3426404 CTCAACAGCAAGAGC TGAACGCTTTCCCGCGTCCCGGGCGGC ATC GCCGTCCGGG-CGCGGCTTCGC-TCCA TTATTTCGCGGCGGC TERM 1704 3426404 - 3426439 + T 95 -20.4 -3.12021 | gap 1, opp_overlap 3426393 3426392, overlap 3426394 AGAGCTGAACGCTTT CCCGCGTCCCGGGCGGC ATC GCCGTCCGGG-CGCGGC TTCGCTCCATTATTT Swit_3119 3428194 - 3426449 - | peptidase S10, serine carboxypeptidase TERM 1705 3427946 - 3427970 + g 100 -20.7 -3.4072 | GGGCTGGAAGCGCGC GGGCGCGGCGG ATG CCGCCGCGTCC TTCTCCTCGGGCGTC Swit_3120 3428213 - 3429778 + | amidase Swit_3121 3431386 - 3429929 - | pyruvate kinase TERM 1706 3431620 - 3431636 + G 72 -13.7 -3.13403 | opp_overlap 3431608 3431605, overlap 3431619 CAAGGGCAGCATCGC GGCGCAG GAG CTGCGCC TGTTCGTCGAACGGG Swit_3122 3431579 - 3431842 + | hypothetical protein TERM 1707 3431859 - 3431876 + F 76 -14.1 -3.20901 | CCTCAGACGCCGGGC GCCGGGC ATCC GCCCGGC TTGGCTTCCTCGCAT Swit_3123 3432055 - 3432912 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1708 3433300 - 3433258 - g 71 -10.8 -3.62046 | gap 3, overlap 3433261 CGAGGCCGCGAAGAA GAT-CGACACGCTCGTCGCCG AGGG CGGCGACG-GC-TATCGCATC GCGGCGCTGCTGACC Swit_3124 3433004 - 3433711 + | hypothetical protein TERM 1709 3434033 - 3434075 + G 75 -16.9 -2.94416 | gap 1, opp_overlap 3434033, overlap 3434035 CGGATCGACCAAGAA GGCCCGGCTCGCGGCCGGCC CGGT GGTCGGCGGCG-GCCGCGTC TATGTGATCGACGTC TERM 1710 3434075 - 3434033 - g 78 -12.5 -3.73647 | gap 1, opp_overlap 3434033 3434035 CGGATCGACCAAGAA GGCCCGGCTCGCGGCCGGCC CGGT GGTCGGCGGCG-GCCGCGTC TATGTGATCGACGTC TERM 1711 3434035 - 3434073 + G 78 -15.9 -3.02471 | gap 1, opp_overlap 3434033, overlap 3434033 GATCGACCAAGAAGG CCCGGCTCGCGGCCGGCC CGGT GGTCGGCGGCG-GCCGCG TCTATGTGATCGACG Swit_3125 3433716 - 3435050 + | Pyrrolo-quinoline quinone engA 3435124 - 3436488 + | GTP-binding protein EngA Swit_3127 3436867 - 3437292 + | hypothetical protein TERM 1712 3437359 - 3437404 + T 81 -10 -4.20868 | gap 3, overlap 3437360 TTGCGACATGCCCGT CCTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAGA TTGTTGTTTTGCCGC TERM 1713 3437360 - 3437403 + T 76 -13.5 -3.11798 | gap 3, overlap 3437359 TGCGACATGCCCGTC CTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAG ATTGTTGTTTTGCCG Swit_3128 3440097 - 3437518 - | ATPase TERM 1714 3438778 - 3438796 + g 74 -12.4 -3.62046 | overlap 3438764 GTCGAGCCGGTCCTT GGAGGCCG CGT CGGTCTCC TTCTTCAGCGCCTCG TERM 1715 3439567 - 3439599 + g 78 -9.7 -4.1552 | overlap 3439568 CGGGTCGAGCTTGCC GTCGCGCGCCGCCTG GGT CAGGTCGCGGGCGAA TTTCTTGAGCGCGTC TERM 1716 3440269 - 3440237 - H 100 -14.8 -4.36914 | opp_overlap 3440246, overlap 3440239 CTCGTCCCGATAAAA CTCCGCCAAGGGGC ATCGA GCCCCTTGGCTGCG TCACCCACCCCCAGC TERM 1717 3440267 - 3440239 - H 79 -16 -2.52946 | opp_overlap 3440246, overlap 3440237 CGTCCCGATAAAACT CCGCCAAGGGGC ATCGA GCCCCTTGGCTG CGTCACCCACCCCCA TERM 1718 3441789 - 3441742 - g 77 -11.8 -3.85698 | overlap 3441743 GCCGCGTTGCAGAAA TGGCTCGGCCGGCCCGCCTATC GGCT GATGGTCGAGCCGGGCGAGCGG ACCGCGTCCGACATG TERM 1719 3441788 - 3441743 - g 72 -15.3 -2.91276 | overlap 3441742 CCGCGTTGCAGAAAT GGCTCGGCCGGCCCGCCTATC GGCT GATGGTCGAGCCGGGCGAGCG GACCGCGTCCGACAT Swit_3129 3440398 - 3443301 + | peptidase M16 domain-containing protein Swit_3131 3444825 - 3443758 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Swit_3132 3445316 - 3444828 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1720 3445420 - 3445445 + r 100 -14.7 -4.2558 | overlap 3445421 TGCTTCGCATGGTCC CCCTCCCCTGC AAAG GCAGGGGAGGA TTTTACTCAGCGCTC TERM 1721 3445421 - 3445444 + r 91 -18.2 -3.15027 | overlap 3445420 GCTTCGCATGGTCCC CCTCCCCTGC AAAG GCAGGGGAGG ATTTTACTCAGCGCT Swit_3133 3446138 - 3445452 - | phosphoglycerate mutase TERM 1722 3446597 - 3446626 + G 76 -14.3 -3.50853 | gap 1 GGGATCGGCGCGCCG GCCGATCCGGCGCG GGT CGCGGCG-ATCGGC TTCTGCTTCGGCGGC Swit_3134 3446267 - 3446971 + | dienelactone hydrolase Swit_3135 3447062 - 3449851 + | phosphoenolpyruvate carboxylase Swit_3136 3449964 - 3451019 + | 2-nitropropane dioxygenase, NPD Swit_3137 3452044 - 3451274 - | methyltransferase type 11 Swit_3138 3452180 - 3452350 + | hypothetical protein TERM 1723 3452371 - 3452401 + F 91 -16.3 -3.63515 | gap 1, opp_overlap 3452377, overlap 3452377 GCGAGCGACGAGGTT CG-AAAAGGCCGCC TCCG GGCGGCCTTTTTCG TTCTTGCGAATGAAG TERM 1724 3452394 - 3452377 - f 90 -14.1 -4.10161 | opp_overlap 3452371 3452377 GACGAGGTTCGAAAA GGCCGCC TCCG GGCGGCC TTTTTCGTTCTTGCG TERM 1725 3452377 - 3452394 + F 100 -14.1 -4.99435 | opp_overlap 3452377, overlap 3452371 GACGAGGTTCGAAAA GGCCGCC TCCG GGCGGCC TTTTTCGTTCTTGCG Swit_3139 3452556 - 3453035 + | bacterioferritin Swit_3140 3453152 - 3453400 + | hypothetical protein TERM 1726 3453413 - 3453441 + T 100 -22.5 -4.27584 | opp_overlap 3453413 TGATCCGTGCGAAAA GGGCCGGGACGTC GAT GATGTCCCGGCCC TTTTCCGTTCGCGGT TERM 1727 3453441 - 3453413 - T 100 -20.3 -4.08216 | opp_overlap 3453413 TGATCCGTGCGAAAA GGGCCGGGACGTC GAT GATGTCCCGGCCC TTTTCCGTTCGCGGT Swit_3141 3455350 - 3453473 - | sulfotransferase Swit_3142 3456873 - 3455359 - | TPR repeat-containing protein Swit_3143 3458042 - 3456876 - | aspartyl/asparaginyl beta-hydroxylase TERM 1728 3458264 - 3458237 - R 100 -20.6 -4.72007 | opp_overlap 3458239 GTCCACCAAAAGAAA GAGGCGGCGGGG TTGC CCCCACCGCCTC CTCTGGCGTCAGCCC TERM 1729 3458239 - 3458262 + r 77 -15.2 -2.63596 | opp_overlap 3458237 CCACCAAAAGAAAGA GGCGGCGGGG TTGC CCCCACCGCC TCCTCTGGCGTCAGC Swit_3144 3461407 - 3458285 - | TonB-dependent receptor TERM 1730 3460909 - 3460952 + g 80 -16.6 -3.14132 | gap 1 GGATGAAGTTGAGGT CGGCGGCCGAC-GAGGTCGGG TCG CCCGGCATCAGGCGGCGGCCG TTGATCAGGACGAGC Swit_3145 3461582 - 3462118 + | hypothetical protein TERM 1731 3462324 - 3462307 - T 77 -14.1 -3.30701 | overlap 3462302 TGCGAGGAAAGCCAA GCCGGGC GGAG GCCCGGC GCCTGAGGGCCGCCC TERM 1732 3462394 - 3462360 - T 95 -10 -4.41616 | overlap 3462346 3462361 3462363 3462389 AGCGGGCCAAACAAA CTACCGTTCCATTGGC CCC GCCAATGGAACCGGAT CGATCCGCGCGTCGC TERM 1733 3462393 - 3462361 - T 76 -13.5 -3.24488 | overlap 3462346 3462360 3462363 3462389 GCGGGCCAAACAAAC TACCGTTCCATTGGC CCC GCCAATGGAACCGGA TCGATCCGCGCGTCG TERM 1734 3462391 - 3462363 - T 86 -16.1 -3.18452 | overlap 3462346 3462361 3462360 3462389 GGGCCAAACAAACTA CCGTTCCATTGGC CCC GCCAATGGAACCG GATCGATCCGCGCGT Swit_3146 3463259 - 3462360 - | peptidase M23B Swit_3147 3463453 - 3463256 - | hypothetical protein Swit_3148 3464974 - 3463496 - | exodeoxyribonuclease VII large subunit TERM 1735 3465374 - 3465316 - gH 70 -12.3 -3.22475 | gap 2, overlap 3465314 3465317 GCCAGCGCGAGAACA TCCCGACCGCGGCCTATGGCCGCTTCGGC GGC GCCGGCTCGGCCA-AGGCCGCGCTCGAC- AGCTTCGGCGTGCCG TERM 1736 3465374 - 3465317 - gH 86 -18.3 -2.53271 | gap 1, overlap 3465314 3465316 CCAGCGCGAGAACAT CCCGACCGCGGCCTATGGCCGCTTCGGC GGC GCCGGCTCGGCCA-AGGCCGCGCTCGAC AGCTTCGGCGTGCCG TERM 1737 3466144 - 3466186 + GH 70 -10.5 -3.5394 | opp_overlap 3466141, overlap 3466145 3466149 3466179 3466180 TCGGCCAGGATATCG GCGAGGCGCG-CGACAGCGCC TAT GCCGCGGTCGACGCGC-TCGA TTTCGCGAGCGGTTT TERM 1738 3466145 - 3466185 + GH 72 -14 -2.72043 | opp_overlap 3466141, overlap 3466144 3466149 3466179 3466180 CGGCCAGGATATCGG CGAGGCGCG-CGACAGCGCC TAT GCCGCGGTCGACGCGC-TCG ATTTCGCGAGCGGTT TERM 1739 3466149 - 3466182 + GH 74 -14.5 -2.64155 | gap 1, opp_overlap 3466141, overlap 3466145 3466144 3466179 3466180 CAGGATATCGGCGAG GCGCG-CGACAGCGCC TAT GCCGCGGTCGACGCGC TCGATTTCGCGAGCG Swit_3149 3464973 - 3466274 + | phosphoribosylamine--glycine ligase Swit_3150 3466307 - 3466810 + | hypothetical protein Swit_3151 3467618 - 3466851 - | thiamine-phosphate pyrophosphorylase Swit_3152 3467986 - 3467615 - | hypothetical protein Swit_3153 3468236 - 3468000 - | hypothetical protein Swit_3154 3469434 - 3468262 - | cystathionine gamma-synthase TERM 1740 3468489 - 3468463 - G 74 -12.2 -3.63515 | overlap 3468481 GGCGAGGGTGAAGAA GCGCACCGCGTC GAT GAAGCGGCGCAC CGCCGCGACCCCGCC TERM 1741 3469382 - 3469338 - G 74 -15.6 -3.05022 | gap 1, opp_overlap 3469336 3469370 TGCTCGACAGATAGA GCGGCGGCGCGA-CGGCGCCG AAGC CGGCGTCGGTCGCGACGCCAT GCGCGGCCGAGATCG Swit_3155 3469582 - 3469427 - | hypothetical protein Swit_3156 3470063 - 3469638 - | MarR family transcriptional regulator TERM 1742 3469683 - 3469670 - G 81 -9.5 -4.38154 | opp_overlap 3469667 3469670 AGATCTCCGAGAAAA GCGGC CTTA GCCGC TGGATTTCCTCCCGG TERM 1743 3470117 - 3470097 - H 71 -12.7 -3.05463 | opp_overlap 3470102 ATGTCTCCGATTGAA CTATATCGC ATT GCGATATAG TGCGCCCCTGCCCCC Swit_3157 3470155 - 3471936 + | CBS domain-containing protein Swit_3158 3472581 - 3472090 - | hypothetical protein Swit_3159 3473426 - 3472578 - | LysR family transcriptional regulator Swit_3160 3473568 - 3473939 + | hypothetical protein Swit_3161 3473936 - 3474157 + | hypothetical protein Swit_3162 3474248 - 3474889 + | 1-Cys peroxiredoxin TERM 1744 3475055 - 3474997 - g 78 -13.7 -3.5393 | gap 2, opp_overlap 3475024, overlap 3474998 ACGATCTTGCCGAAA CGGCGGCGGCGATCGCGGCCTGCCGCGCC GCC GACGCGCCCAGCCGCGACCT-CGACG-CG CGGATCGCGCGGGCG Swit_3163 3474942 - 3475331 + | hypothetical protein TERM 1745 3475667 - 3475682 + G 71 -10.4 -3.78934 | opp_overlap 3475658 3475679 CAACAACGCCGCCCA GGCGTG GAAC CACGCC TTCTTCTGGGAAAGC Swit_3164 3475395 - 3476087 + | superoxide dismutase Swit_3165 3476099 - 3476347 + | hypothetical protein Swit_3166 3476545 - 3478173 + | Na+/H+ antiporter Swit_3167 3479650 - 3478208 - | RND efflux system outer membrane lipoprotein Swit_3168 3480543 - 3479644 - | secretion protein HlyD family protein Swit_3169 3480769 - 3480545 - | hypothetical protein Swit_3170 3482916 - 3480766 - | fusaric acid resistance protein region TERM 1746 3481729 - 3481674 - G 74 -16.9 -2.78935 | gap 3 AGACCGCGCAGTAGA GCGCGATC--GCCGTCGCCGTCGCCAGC CCC GCCAGCG-CGGCGACGCCATGGTCGCGC GCCAGCGCGAACGGC TERM 1747 3483050 - 3483108 + H 75 -14.7 -2.72144 | opp_overlap 3483049 3483050, overlap 3483077 3483098 TCATTCCCGCGAAAG CGGGAATCCATGGACGGCGGCCCG-CAGG AGG CCTGATGCCCCGTT-TCCGTGGATTCCCG CTTTCGCGGGAATGA Swit_3171 3483130 - 3483552 + | hypothetical protein Swit_3172 3484051 - 3483590 - | hypothetical protein Swit_3173 3485273 - 3484062 - | nitric oxide dioxygenase Swit_3174 3485586 - 3485314 - | hypothetical protein Swit_3175 3486011 - 3485583 - | hypothetical protein TERM 1748 3486117 - 3486164 + r 70 -7.5 -3.96449 | gap 1, opp_overlap 3486104 3486147, overlap 3486119 3486120 3486161 AACGATGCGGGTCGC CTGGGAACCGCGCCGCCGGG CCTGGCAAA CCCGGCGGCGCTCC-CCCTG TTATTTCAGGTCTTC Swit_3176 3487091 - 3486165 - | hypothetical protein TERM 1749 3486365 - 3486423 + g 78 -13.8 -3.61715 | gap 4, overlap 3486364 CGGCGGCCGGGGTGG CGGCGGC-CGCGGC-GGCGGCG--GGCCTC ACC GCGGCCAGCGCCGCCTGCTGCGCGACGACG TTGTTGAACGCGATG Swit_3177 3487290 - 3489113 + | GTP-binding protein LepA TERM 1750 3489339 - 3489296 - T 100 -17.4 -5.03715 | gap 1, opp_overlap 3489338, overlap 3489297 3489298 ATCAGCCCCAAAAAA GTCGGGCGGCGGACC-GCAAG CCC CTTGCCGGTCCGCCGCCCTGT GGGGGCTGGAAGTCC TERM 1751 3489338 - 3489297 - T 100 -20.9 -3.61506 | gap 1, overlap 3489296 3489298 TCAGCCCCAAAAAAG TCGGGCGGCGGACC-GCAAG CCC CTTGCCGGTCCGCCGCCCTG TGGGGGCTGGAAGTC TERM 1752 3489337 - 3489298 - T 100 -24.4 -2.76422 | gap 1, overlap 3489297 3489296 CAGCCCCAAAAAAGT CGGGCGGCGGACC-GCAAG CCC CTTGCCGGTCCGCCGCCCT GTGGGGGCTGGAAGT Swit_3179 3490713 - 3490261 - | hypothetical protein Swit_3180 3491146 - 3490787 - | hypothetical protein Swit_3181 3491817 - 3491221 - | sigma-70, region 4 type 2 Swit_3182 3491965 - 3493095 + | oxidoreductase domain-containing protein Swit_3183 3493092 - 3494009 + | oxidoreductase domain-containing protein Swit_3184 3494006 - 3495208 + | glycosyl transferase, group 1 Swit_3185 3495462 - 3495205 - | hypothetical protein Swit_3186 3496553 - 3495477 - | response regulator receiver modulated CheB methylesterase Swit_3187 3496977 - 3496567 - | response regulator receiver protein TERM 1753 3497557 - 3497544 - H 71 -5.3 -4.41241 | opp_overlap 3497551 GAAAGTCGTAGAAAA TTTCG GAGA CGAAA CGACTTTATGTGGAT Swit_3188 3497665 - 3498291 + | response regulator receiver protein TERM 1754 3498405 - 3498443 + T 71 -11.1 -3.41024 | gap 1, opp_overlap 3498381, overlap 3498404 3498434 GGCTTCCGCCAGGAT GAC-GGAGAGGATCGG GCCGAATG CCGATCCTCTCCAGGC TATTGTCTTGGAGCG TERM 1755 3498558 - 3498513 - T 84 -11.4 -4.20868 | gap 3, opp_overlap 3498519, overlap 3498514 GCGGTAAAACAACAA TCTAGAGCGG--C-CGATCCGAT GCA ATCGGATCGTGAACCGCTCTAGT AGCGGAAGCGGACAC TERM 1756 3498557 - 3498514 - T 80 -14.9 -3.11798 | gap 3, opp_overlap 3498519, overlap 3498513 CGGTAAAACAACAAT CTAGAGCGG--C-CGATCCGAT GCA ATCGGATCGTGAACCGCTCTAG TAGCGGAAGCGGACA Swit_3189 3500425 - 3498554 - | TonB-dependent receptor, plug TERM 1757 3500479 - 3500517 + H 84 -10.9 -4.14739 | gap 1, opp_overlap 3500450 3500447 3500446 3500478 3500477, overlap 3500512 ACGGCTTCGGAAACG CCCCGCGCGCACGACCCC TGTC GGCGTCGT-CACGCGAGG TTTTCGCCTCGATCA TERM 1758 3501103 - 3501146 + G 74 -13.8 -3.29511 | gap 1, opp_overlap 3501106 TCGCGCCTCAAGATC GAAGGCGACATCGAGCGCGCG CCC TGCGCGCTCGAC-TCGCCCGC TTATGCGAACCTCAG TERM 1759 3501143 - 3501106 - g 90 -20 -3.1855 | gap 1, opp_overlap 3501103 CGCCTCAAGATCGAA GGCGACATCGAGCGCGC GCCCT GCGCGCTCGAC-TCGCC CGCTTATGCGAACCT TERM 1760 3501214 - 3501192 - g 71 -11.3 -3.65046 | gap 1 GGTCCAGTTCAACAA CCTCCAGGGC GTCA GCCC-GGAGG AGCTTCGCGAGTCCT Swit_3190 3500926 - 3502695 + | polypeptide-transport-associated domain-containing protein TERM 1761 3504873 - 3504902 + G 70 -9.1 -3.91897 | ATCGAGGCGCAGGGC GGCACGGCCCTCG CGAT CGAGGGCAGCACC TTTCTCGATGCGAGC TERM 1762 3504974 - 3504940 - g 79 -14.9 -3.32844 | gap 1, opp_overlap 3504939 GCGGGCAGGGCATAA CGGCG-GGCGGCGCCG GCAC CGGCGGCGCCGCGCAG ATCTTCGCCAATGGC Swit_3191 3502698 - 3507293 + | filamentous haemagglutinin outer membrane protein Swit_3192 3507290 - 3510400 + | TPR repeat-containing protein TERM 1763 3510555 - 3510504 - T 90 -19.6 -2.74019 | overlap 3510495 TAGAATGCGGAACGA TTCCCCGAGGCTCTCTCCGG GAAAGGGGAAGG CCGGAGAGAGCGCCGGGGAA TGGGGTCAGAGCGAT Swit_3193 3510792 - 3510619 - | hypothetical protein Swit_3194 3510944 - 3512116 + | FAD dependent oxidoreductase TERM 1764 3512296 - 3512269 - T 100 -16.3 -5.07652 | gap 1, opp_overlap 3512269 GGCGCCAAAAGAAAA GGGCGGGTCGCC CGTTC GGCG-CCCGCCC TTTCGCTTGTCCCGG TERM 1765 3512269 - 3512296 + T 93 -16.3 -3.80625 | gap 1, opp_overlap 3512269 GGCGCCAAAAGAAAA GGGCGGGTCGCC CGTTC GGCG-CCCGCCC TTTCGCTTGTCCCGG Swit_3195 3513250 - 3512321 - | electron transfer flavoprotein, alpha subunit-like protein TERM 1766 3512606 - 3512549 - G 72 -15.3 -2.87132 | gap 1, opp_overlap 3512560 3512561 3512598 GTCGTTGGGGACATA GCCCG-CGTCGACCGCGGCGCGGCTGGC GCC GACCGCCGCGCCGAGCTTGTCGGCGAGC GGCTCGATGATCGTG TERM 1767 3512560 - 3512594 + g 70 -12.6 -3.28712 | opp_overlap 3512549, overlap 3512561 CATAGCCCGCGTCGA CCGCGGCGCGGCTGGC GCC GACCGCCGCGCCGAGC TTGTCGGCGAGCGGC TERM 1768 3512561 - 3512593 + g 73 -16.1 -2.57132 | opp_overlap 3512549, overlap 3512560 ATAGCCCGCGTCGAC CGCGGCGCGGCTGGC GCC GACCGCCGCGCCGAG CTTGTCGGCGAGCGG Swit_3196 3513996 - 3513247 - | electron transfer flavoprotein, alpha/beta-subunit-like protein TERM 1769 3513798 - 3513841 + g 72 -5.3 -4.4078 | overlap 3513799 GCGTTTCCTGGGCCT TGGCCTCGCCGATCGAGA-CG GCGA TGATCTCGGTC-GCGACGCCC TTTTCCTTCAGGCGG Swit_3197 3515394 - 3514195 - | succinyl-CoA synthetase (ADP-forming) beta subunit Swit_3198 3515842 - 3515519 - | hypothetical protein Swit_3199 3516712 - 3516122 - | hypothetical protein Swit_3200 3517851 - 3516709 - | lycopene cyclase Swit_3201 3518084 - 3519943 + | thiamine biosynthesis protein ThiC TERM 1770 3519991 - 3519960 - f 75 -13.8 -3.05384 | opp_overlap 3519955 3519954 3519984 CGGGTCGCGATGGAA GGAGGCTCATCG GCCGGCAT CGACGAGCCTCC TTGAAGTTCTTCTTT Swit_3202 3520055 - 3520606 + | hypothetical protein TERM 1771 3520635 - 3520652 + F 73 -11.3 -3.58726 | TTTTCCTCTTCGTCA TTCCCGC CTTC GCGGGAA TTGTCTCTCGGGAAA TERM 1772 3520722 - 3520699 - f 86 -18.2 -2.62184 | TGGCTGGCGAGACGA GCTGCGGGGT GGCC ACCCCGCAGC TCGTGGCGGCAAGGC Swit_3203 3520870 - 3521826 + | transposase IS116/IS110/IS902 family protein Swit_3204 3521850 - 3522506 + | hypothetical protein Swit_3205 3523195 - 3522557 - | GCN5-related N-acetyltransferase Swit_3206 3523991 - 3523206 - | uracil-DNA glycosylase Swit_3207 3526503 - 3524071 - | hypothetical protein TERM 1773 3526659 - 3526630 - g 73 -12.1 -3.53444 | gap 1, opp_overlap 3526639 3526643 3526655 GCATGCTGGCCGAAA CGGTCGACGGGGAC GCC GCCGCCGTCG-CCG AGCTGCGCGCGCTGT Swit_3208 3526617 - 3526880 + | hypothetical protein Swit_3209 3526991 - 3528217 + | hypothetical protein Swit_3210 3528260 - 3529372 + | hypothetical protein TERM 1774 3530759 - 3530719 - g 77 -15.4 -3.14132 | gap 1 CCGGCGGGGGAGGAA CTCCCACCGTCACCCCGGC GGAG GCCGGGGTCTCGG-GAGAG GGGCGATGAGGTCGA Swit_3211 3529369 - 3530790 + | histidine kinase TERM 1775 3530824 - 3530857 + T 100 -22.5 -3.31461 | opp_overlap 3530827, overlap 3530827 GGTGACGGTTCTCAA GAACGAGGCCGGAGC TTTC GCCCCGGCCTCGTTC TTGTCCCGCTAAATC TERM 1776 3530854 - 3530827 - T 100 -20.6 -3.61715 | opp_overlap 3530827 3530824 GACGGTTCTCAAGAA CGAGGCCGGAGC TTTC GCCCCGGCCTCG TTCTTGTCCCGCTAA TERM 1777 3530827 - 3530854 + T 100 -18.4 -3.79906 | opp_overlap 3530827, overlap 3530824 GACGGTTCTCAAGAA CGAGGCCGGAGC TTTC GCCCCGGCCTCG TTCTTGTCCCGCTAA Swit_3212 3532159 - 3530876 - | citrate synthase Swit_3213 3533651 - 3532227 - | glutamyl-tRNA synthetase Swit_3214 3533776 - 3535920 + | ComEC/Rec2-related protein Swit_3215 3535931 - 3536437 + | GCN5-related N-acetyltransferase TERM 1778 3536433 - 3536478 + T 84 -11.4 -4.20868 | gap 3, opp_overlap 3536429 3536428, overlap 3536434 AGCGGCCAAACCCCA CCTAGAGCGGTTCACGATCCGAT TGC ATCGGATCG-G--CCGCTCTAGA TTGTTGTTTTACCGC TERM 1779 3536434 - 3536477 + T 80 -14.9 -3.11798 | gap 3, opp_overlap 3536429 3536428, overlap 3536433 GCGGCCAAACCCCAC CTAGAGCGGTTCACGATCCGAT TGC ATCGGATCG-G--CCGCTCTAG ATTGTTGTTTTACCG TERM 1780 3536579 - 3536532 - T 76 -9.8 -3.86346 | overlap 3536533 CCATCTGCCTAGAAA TCGCTCTAGCCGTCATGCCAGC CTGT ACTGGCATGACGAGGAGAGGGT GAATGACGTCGACAA TERM 1781 3536578 - 3536533 - T 70 -13.3 -2.91593 | overlap 3536532 CATCTGCCTAGAAAT CGCTCTAGCCGTCATGCCAGC CTGT ACTGGCATGACGAGGAGAGGG TGAATGACGTCGACA Swit_3216 3537269 - 3536595 - | LexA repressor Swit_3217 3538514 - 3537327 - | molybdopterin molybdochelatase TERM 1782 3538040 - 3537988 - G 86 -14 -3.83026 | overlap 3537992 CCGGTCGACAGCAAA GCGACGCGCGGCCGGCGGCGG-ACGG CGA CCGCGCCATGGCC-GCCGCTCGCCGC CAGCGCGATCGCCGC TERM 1783 3538049 - 3537992 - G 81 -18.3 -2.69601 | gap 1, overlap 3537988 TCGACAGCAAAGCGA CGCGCGGCCGGCGGCGGACGGCGACC GCGCCAT GGCCGCCGCTCGCCGCCAGC-GCGAT CGCCGCCGCGCCGAT Swit_3218 3538993 - 3538514 - | GTP cyclohydrolase subunit MoaC TERM 1784 3538807 - 3538838 + g 71 -11.4 -3.62597 | overlap 3538808 TGGCCGCCATGATCC CGGCGACGCGCGCG ACCG CGAGCACGTCGCCC TTCTTGACCGATCCG TERM 1785 3538808 - 3538837 + g 70 -14.9 -2.77344 | overlap 3538807 GGCCGCCATGATCCC GGCGACGCGCGCG ACCG CGAGCACGTCGCC CTTCTTGACCGATCC Swit_3219 3539784 - 3538990 - | indole-3-glycerol-phosphate synthase Swit_3221 3540986 - 3540300 - | hypothetical protein Swit_3222 3541118 - 3541879 + | response regulator receiver protein Swit_3223 3541971 - 3542351 + | hypothetical protein Swit_3224 3542441 - 3543061 + | hypothetical protein TERM 1786 3543116 - 3543092 - T 100 -16.4 -4.015 | GCATTGAGGAAAGAA GGGCCCGGCC GGGGA AGCCGGGCCC CCTGCATCAGAACTG Swit_3225 3545534 - 3543123 - | TonB-dependent siderophore receptor Swit_3226 3546944 - 3545952 - | anthranilate phosphoribosyltransferase Swit_3227 3547567 - 3546947 - | anthranilate synthase, component II TERM 1787 3547612 - 3547669 + H 77 -13.3 -3.53811 | opp_overlap 3547612, overlap 3547601 GTCATCCTGGCGAAA GCCAGGATCTCTCTTCCCGTCTGTCGC GTCG GCCACGGGAAGGCAGGGAGATCCCGGC TTTCGCCGGGATGAC TERM 1788 3547669 - 3547612 - H 73 -11.1 -3.53811 | opp_overlap 3547601 3547612 GTCATCCTGGCGAAA GCCAGGATCTCTCTTCCCGTCTGTCGC GTCG GCCACGGGAAGGCAGGGAGATCCCGGC TTTCGCCGGGATGAC Swit_3228 3547727 - 3549610 + | peptidase S15 Swit_3229 3551108 - 3549624 - | EmrB/QacA family drug resistance transporter TERM 1789 3551132 - 3551088 - G 72 -13.4 -3.15861 | gap 1 GAGCACCTGCATGAA GGTGCCGAGCGCGAGCGCCAC CGCC GCGGCGC-CGAGCGCGACGCC GCCGAGCGGCGCCGG Swit_3230 3552355 - 3551168 - | secretion protein HlyD family protein TERM 1790 3551878 - 3551927 + g 74 -16.9 -2.70932 | CGGCGTGCGCCACCT CCTCGCCCGACACCGCGCCCTCG GCGG CGGCGGCGCGGCGGCGCGCCAGG TCGTTGCGGGCGCGG Swit_3231 3553822 - 3552359 - | RND efflux system outer membrane lipoprotein TERM 1791 3554324 - 3554374 + G 71 -9.5 -3.70902 | gap 1 CGCTGCGCCGCGCCG CCGCGGAGGAGGGCGTCGCCATCG CCCC CGACGGCAACGTCA-CCGCCGAGG TTTCCCTGTCCGACG Swit_3232 3554047 - 3554541 + | OsmC family protein Swit_3233 3555492 - 3554566 - | LysR family transcriptional regulator TERM 1792 3555615 - 3555644 + r 71 -13.5 -2.60615 | overlap 3555614 3555611 CTCGCCGCGACCTTC CCGAGATCCCGGC CTCC GCCGGGATGACGG ATGTTTCACAGGGCT TERM 1793 3555666 - 3555688 + r 73 -12.6 -3.14211 | CACAGGGCTCCCTCG CGATGCGCGC CGA GCGCGCGGCG TTCCTCGGCGAGGAT Swit_3234 3556966 - 3555650 - | site-specific DNA-methyltransferase (adenine-specific) Swit_3235 3557109 - 3558899 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Swit_3236 3558896 - 3560743 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Swit_3237 3560740 - 3561795 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta Swit_3238 3561880 - 3562725 + | HpcH/HpaI aldolase Swit_3239 3563452 - 3562748 - | TetR family transcriptional regulator Swit_3240 3563599 - 3565206 + | aldehyde dehydrogenase Swit_3241 3565341 - 3567683 + | TonB-dependent receptor Swit_3242 3567762 - 3569483 + | amidohydrolase 3 Swit_3243 3569576 - 3571297 + | amidohydrolase 3 Swit_3244 3571294 - 3572874 + | metal dependent phosphohydrolase Swit_3245 3572895 - 3574604 + | amidohydrolase 3 Swit_3246 3574621 - 3576315 + | amidohydrolase 3 TERM 1794 3578125 - 3578161 + G 77 -15.2 -3.13403 | gap 2, overlap 3578123 GGCATCGCGGTGGAG GGCGAGATCGTCGGCGGC GAT GCCGGCGACG-TC-CGCC TGTTCGTCAACGGCC Swit_3247 3576331 - 3578358 + | amidase Swit_3248 3578412 - 3579521 + | histone deacetylase superfamily protein Swit_3249 3579518 - 3580216 + | hypothetical protein Swit_3250 3580842 - 3580369 - | hypothetical protein Swit_3251 3581355 - 3580852 - | amine dehydrogenase Swit_3252 3581978 - 3581352 - | methylamine dehydrogenase accessory protein MauD Swit_3253 3582526 - 3581975 - | hypothetical protein Swit_3254 3583680 - 3582523 - | amine dehydrogenase TERM 1795 3582973 - 3582961 - G 72 -9.1 -4.011 | CGAATAGGTAAAGAA CAGCC ACT GGCTG CCGGTCCACACGCCT Swit_3255 3584077 - 3583703 - | cytochrome c, class I Swit_3256 3586296 - 3584104 - | TonB-dependent receptor Swit_3257 3586507 - 3587130 + | TetR family transcriptional regulator Swit_3258 3587739 - 3587266 - | AsnC family transcriptional regulator Swit_3259 3587783 - 3588058 + | hypothetical protein Swit_3260 3588743 - 3588078 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1796 3588537 - 3588510 - G 82 -14.2 -3.68222 | gap 1, overlap 3588515 GGCGAAGCGGAAGAA GACCAGC-GCGAC CGG GCCGCGGCTGGTC AGCCGGTCGAGCGTC TERM 1797 3588869 - 3588905 + H 79 -8.8 -4.27443 | opp_overlap 3588895 3588898, overlap 3588848 CGTTAGTGAAATTCT GTCGCCGATCTATT TGCAATTAC AATCGATCGGCGGC TTCTTTTCATAATAA Swit_3261 3588979 - 3589839 + | taurine dioxygenase TERM 1798 3589848 - 3589877 + T 100 -20.7 -3.62046 | CCTCTGACCTTTGGG GCTCGGCCGGCGC CTCA GCGCAGGCCGAGC TTCTTCACCCGATAG Swit_3262 3591607 - 3589862 - | Fis family transcriptional regulator Swit_3263 3591793 - 3594375 + | TonB-dependent receptor Swit_3264 3594393 - 3595445 + | vanillate monooxygenase Swit_3265 3595442 - 3596401 + | ferredoxin TERM 1799 3597055 - 3597082 + G 81 -12.6 -3.92542 | TCTTCGCCCCCTTCC TGCCGCGCCCCG AGGA CGCGGCGCGCCA TTATTTCGACATCAG Swit_3266 3596421 - 3597482 + | Rieske (2Fe-2S) domain-containing protein Swit_3267 3597548 - 3598348 + | hydroxypyruvate isomerase Swit_3268 3598938 - 3598339 - | MarR family transcriptional regulator TERM 1800 3598847 - 3598900 + g 81 -12.5 -3.95036 | gap 1, overlap 3598835 3598849 TCGTCGGGCGATTCC CG-GTCCTTAGACTCGATCCGGTTCA ACC TGAACCGGATCGAGTCTGCGTCCTCC TTGTTTGCCGTGATT TERM 1801 3598849 - 3598897 + g 87 -19.7 -3.03085 | overlap 3598847 GTCGGGCGATTCCCG GTCCTTAGACTCGATCCGGTTCA ACC TGAACCGGATCGAGTCTGCGTCC TCCTTGTTTGCCGTG Swit_3269 3599022 - 3600254 + | cytochrome P450 Swit_3270 3600275 - 3601171 + | 2-hydroxy-3-oxopropionate reductase TERM 1802 3601778 - 3601748 - g 83 -12.4 -4.07885 | GACGCGCCTCGAAAA GGCGGGGGTGCCGA CCG TCGGCTCCTGCGCC GGGCAGTTCACCGCC Swit_3271 3601173 - 3602858 + | dihydroxy-acid dehydratase Swit_3272 3603671 - 3602871 - | enoyl-CoA hydratase Swit_3273 3603776 - 3604657 + | LysR family transcriptional regulator TERM 1803 3605334 - 3605379 + G 85 -16.1 -3.54307 | gap 1, overlap 3605335 3605367 3605378 TCGATCTCCGCGCGC CGGGCGTCGCC-GTCCGGCCGA TCG TCGACCTGACCGGCGATGCCCA TTTCGCCGAGGTGTT TERM 1804 3605335 - 3605378 + G 83 -19.6 -2.72263 | gap 1, overlap 3605334 3605367 CGATCTCCGCGCGCC GGGCGTCGCC-GTCCGGCCGA TCG TCGACCTGACCGGCGATGCCC ATTTCGCCGAGGTGT Swit_3274 3604691 - 3605890 + | acyl-CoA dehydrogenase domain-containing protein TERM 1805 3606781 - 3606835 + G 79 -18.5 -2.67803 | gap 1, overlap 3606780 3606829 GGCGGCGGCGAGGGC CATTGGGCGGCCCG-CCTCGGCGCGG CCCG CCTCGCCGAGGCCGGGCTGTCGAGCG TCGATTTCGTGCGGA Swit_3275 3605890 - 3606897 + | acyl-CoA dehydrogenase domain-containing protein Swit_3276 3606937 - 3607461 + | hypothetical protein TERM 1806 3607500 - 3607471 - T 93 -18.6 -3.16564 | opp_overlap 3607469 3607465 GCCTGACGTGAGGAA GCGGCGCCCACC CCCCTT GGTGGACGCCGC CCTGTTCGTCGCCGC Swit_3277 3608417 - 3607524 - | hypothetical protein Swit_3278 3608585 - 3609010 + | hypothetical protein Swit_3279 3609809 - 3609042 - | short-chain dehydrogenase/reductase SDR Swit_3280 3610699 - 3609800 - | short-chain dehydrogenase/reductase SDR TERM 1807 3610565 - 3610620 + g 87 -21.2 -2.89564 | gap 3 GCGCTTCTGCACGGC GG-GGGCGCCGGCCGAGCGCG-CGGTG ACCAC CACCGTCGCGC-CGGCCGACGCCAGCC TCTGTGCGATCGCCC Swit_3281 3613092 - 3610699 - | TonB-dependent receptor, plug Swit_3282 3613390 - 3614160 + | short-chain dehydrogenase/reductase SDR Swit_3283 3614944 - 3614183 - | helix-turn-helix domain-containing protein TERM 1808 3615047 - 3615076 + r 100 -16.5 -4.04206 | TTTCCACCCCTTACT GGTCCGGTCATCG GCGA CGATGGCCGGATC TTTGTATCCGGCTCA Swit_3284 3615889 - 3615089 - | short-chain dehydrogenase/reductase SDR TERM 1809 3615172 - 3615200 + g 70 -15.3 -2.72661 | opp_overlap 3615155 CGACGGCATGGGCGA TGTCGGCGGGATC GCC GATCCGGCCGGCA TGGTTCGCGATCATC TERM 1810 3615565 - 3615617 + g 71 -11.7 -3.61715 | overlap 3615566 CGTTCCAGGTGTCGG CGTCGGCGTCGAGCCAGGGGGTGGT GCC GCCGCCCGCCGATTCGCCGCCGGCA TTGTTGACGAGGATG TERM 1811 3615566 - 3615616 + g 70 -15.2 -2.76815 | overlap 3615565 GTTCCAGGTGTCGGC GTCGGCGTCGAGCCAGGGGGTGGT GCC GCCGCCCGCCGATTCGCCGCCGGC ATTGTTGACGAGGAT TERM 1812 3615724 - 3615765 + g 73 -10 -3.90291 | CCGCATGGACGGCGC CGCCGGC-CTCGGCGACCCG ATCC CGCGCCGCCGCGAGCCG-CG TTTCGTTGCGGCCGT Swit_3285 3616338 - 3615886 - | hypothetical protein Swit_3286 3617501 - 3616335 - | hypothetical protein Swit_3287 3618261 - 3617521 - | short-chain dehydrogenase/reductase SDR Swit_3288 3618469 - 3619263 + | short-chain dehydrogenase/reductase SDR Swit_3289 3619266 - 3620018 + | short-chain dehydrogenase/reductase SDR Swit_3290 3620032 - 3621273 + | NADH:flavin oxidoreductase/NADH oxidase Swit_3291 3621242 - 3622039 + | short-chain dehydrogenase/reductase SDR TERM 1813 3622055 - 3622079 + G 70 -14.9 -2.68942 | overlap 3622054 GCGGCGCCGACCGGG AGGCGCCGGGC GAG GCCTGGCGCCA ATTCTGTCGCCGGCT Swit_3292 3622036 - 3623124 + | hypothetical protein Swit_3293 3623117 - 3623587 + | hypothetical protein Swit_3294 3624473 - 3623724 - | short-chain dehydrogenase/reductase SDR Swit_3295 3624844 - 3624476 - | nuclear transport factor 2 TERM 1814 3624760 - 3624785 + g 70 -12.6 -3.29144 | gap 1, opp_overlap 3624760 CGTCGGCCGCGAACA GGGCGACCACC ATCTC GG-GGTCGCCC TTGTCGAACGCCTCG Swit_3296 3625696 - 3624899 - | Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit-like protein TERM 1815 3625761 - 3625715 - R 76 -7.2 -4.36914 | CTGGTCCTCAGAAAA TCGGGAGC-GGCAGCTCGGCGA TGGCG TCGCCGC-CCGCCTGCGCCAGA TAATGCGCCTCGTCG Swit_3297 3626588 - 3625707 - | coenzyme A transferase Swit_3298 3627478 - 3626585 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1816 3628184 - 3628222 + G 74 -10.8 -3.75738 | overlap 3628181 3628187 GCGGCGCTGGGCGAG GGCGCCGCCGCGCGCC GGCAAAG GGCGCGCGCCGACATC TTCTTCATGATGCTC Swit_3299 3627695 - 3628345 + | regulatory protein, TetR Swit_3300 3628472 - 3629485 + | alcohol dehydrogenase Swit_3301 3629478 - 3630728 + | hypothetical protein Swit_3302 3630725 - 3631942 + | hypothetical protein Swit_3303 3631957 - 3632715 + | short-chain dehydrogenase/reductase SDR Swit_3304 3632712 - 3633563 + | xylose isomerase domain-containing protein TERM 1817 3633949 - 3634002 + G 80 -16 -3.16191 | gap 3 CGCTTCGACGCGGCG CAGGCGCTGCTGCGGCGGATCGTCGCC GAC GGCG-CGATCGGC-GC-GCCGCGCCAG TTCCTGCGCATCTAC Swit_3305 3633556 - 3634677 + | oxidoreductase domain-containing protein Swit_3306 3634724 - 3636259 + | AMP-dependent synthetase and ligase TERM 1818 3636395 - 3636428 + T 72 -12.4 -3.28924 | overlap 3636396 3636427 ATGGCCGCGACCGTG TCGCGATCAGGCGA CCCGCT TCGCCGGATCGCGC TTGTCGACGACCGTG TERM 1819 3636396 - 3636427 + T 77 -15.9 -2.57211 | overlap 3636395 TGGCCGCGACCGTGT CGCGATCAGGCGA CCCGCT TCGCCGGATCGCG CTTGTCGACGACCGT Swit_3307 3637474 - 3636401 - | Rieske (2Fe-2S) domain-containing protein TERM 1820 3636427 - 3636461 + g 70 -12.8 -3.31144 | overlap 3636395 GCTTCGCCGGATCGC GCTTGTCGACGACCGT GTG ACGGCCGTTGACGCGC TTCTGGAAATCGGGC Swit_3308 3637569 - 3638435 + | LysR family transcriptional regulator Swit_3309 3638438 - 3639403 + | alpha/beta hydrolase fold Swit_3310 3640011 - 3639457 - | hypothetical protein Swit_3311 3640119 - 3641174 + | alpha/beta hydrolase fold Swit_3312 3643621 - 3641267 - | TonB-dependent receptor Swit_3313 3644550 - 3643741 - | short-chain dehydrogenase/reductase SDR Swit_3314 3646973 - 3644559 - | TonB-dependent receptor TERM 1821 3646943 - 3646958 + g 76 -2.4 -4.7254 | CGATCACCGCGGCGC GCGTGG AAAA CCGAGC TTTTTGATGCGACAT Swit_3315 3647275 - 3648120 + | AraC family transcriptional regulator Swit_3316 3648225 - 3650051 + | acyl-CoA synthetase TERM 1822 3651159 - 3651132 - g 74 -14.2 -3.26947 | gap 1 CAAGTGCCAGATCAA CACCTTCGGCGGC GGC ACCGCCG-AGGTG CTGCGCGACATGGTG Swit_3317 3650041 - 3651213 + | acyl-CoA dehydrogenase domain-containing protein Swit_3318 3651213 - 3652151 + | hypothetical protein Swit_3319 3652159 - 3653286 + | acyl-CoA dehydrogenase domain-containing protein Swit_3320 3653283 - 3653681 + | dehydratase Swit_3321 3653678 - 3654847 + | lipid-transfer protein TERM 1823 3654838 - 3654872 + T 95 -20 -3.28924 | overlap 3654838 CGGGCTGATATTGGC GGCGGCCTGACCCCCT TTC AGGTCGTCAGGCCGCC TTGTCGAACCAGGTG Swit_3322 3655402 - 3654863 - | hypothetical protein Swit_3323 3655537 - 3656691 + | NADH:flavin oxidoreductase/NADH oxidase Swit_3324 3656703 - 3657449 + | short-chain dehydrogenase/reductase SDR Swit_3325 3658028 - 3657459 - | ethyl tert-butyl ether degradation EthD Swit_3326 3658465 - 3658025 - | hypothetical protein Swit_3327 3658551 - 3659348 + | hypothetical protein Swit_3328 3659366 - 3659869 + | hypothetical protein Swit_3329 3659866 - 3660342 + | hypothetical protein Swit_3330 3660339 - 3660884 + | hypothetical protein Swit_3331 3660881 - 3661243 + | ethyl tert-butyl ether degradation EthD Swit_3332 3661723 - 3661256 - | AsnC family transcriptional regulator Swit_3333 3662241 - 3661720 - | AsnC family transcriptional regulator Swit_3334 3663170 - 3662307 - | short-chain dehydrogenase/reductase SDR Swit_3335 3664925 - 3663213 - | hypothetical protein TERM 1824 3663524 - 3663540 + g 79 -15.1 -3.28712 | opp_overlap 3663514 ACGGATCGGCGCCGG CGCCGCG CGC CGCGGCG TTATAGGCGGCGACG TERM 1825 3663833 - 3663804 - G 77 -14.9 -3.14132 | overlap 3663788 GGTCTCGTCGACGAA GCGTTCGCCGGCG CGGT CGACGGCGATCGC CTGCGCCCAGGCCTT TERM 1826 3664610 - 3664575 - G 100 -22 -3.14132 | gap 1, opp_overlap 3664609 GCTGTCCTCGACGAA GCGGCGCAGGGTCGCGT CCG ACACGACCCTGC-CCGC CTCGATGCGGAGATA Swit_3336 3667147 - 3664922 - | TonB-dependent receptor TERM 1827 3668261 - 3668241 - g 71 -11.1 -3.53811 | CCCAGCTGCTCGAAA TGGAGGCGA CGC TCGCCGCCA GCTTCGACGCGATGA Swit_3337 3667346 - 3668548 + | acyl-CoA dehydrogenase type 2 Swit_3338 3668575 - 3669390 + | alpha/beta hydrolase fold Swit_3339 3669400 - 3670866 + | hypothetical protein Swit_3340 3671944 - 3670850 - | regulatory protein, LuxR Swit_3341 3672011 - 3672925 + | sulfate adenylyltransferase subunit 2 Swit_3342 3672925 - 3674847 + | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein Swit_3343 3674859 - 3675593 + | inositol monophosphatase Swit_3344 3676207 - 3675599 - | TetR family transcriptional regulator TERM 1828 3676275 - 3676289 + G 82 -8.6 -4.42386 | opp_overlap 3676285 GTGCTTGATTTTATC GGTACA ATA TGTACC TTTTATCCATGGCGA Swit_3345 3676260 - 3678026 + | amidohydrolase 3 Swit_3346 3678023 - 3678241 + | hypothetical protein Swit_3347 3678238 - 3678489 + | hypothetical protein Swit_3348 3678486 - 3679319 + | hypothetical protein TERM 1829 3679536 - 3679575 + G 74 -14.2 -3.32844 | ACCAGGTCGCCCGCT TCGGCCGGGCCGGCGTCG GCAC CGACATCCGCCTGGTCGA TTATCGGGTCGAGCC Swit_3349 3679343 - 3679780 + | hypothetical protein Swit_3350 3679850 - 3680197 + | hypothetical protein Swit_3351 3680465 - 3680202 - | hypothetical protein Swit_3352 3680690 - 3681328 + | maleylacetoacetate isomerase TERM 1830 3682168 - 3682188 + G 72 -13.9 -3.15544 | ACGACCGGGCTGGTC GCGCGGGCC GAG GGCCGGCGC TTCGTCGGGATCGAG Swit_3353 3681325 - 3682269 + | DNA methylase N-4/N-6 domain-containing protein Swit_3354 3682357 - 3683508 + | luciferase family protein Swit_3355 3683505 - 3684272 + | short-chain dehydrogenase/reductase SDR Swit_3356 3685573 - 3684452 - | regulatory protein, LuxR TERM 1831 3686061 - 3686119 + G 70 -14.6 -2.80074 | gap 4, overlap 3686064 3686075 3686083 CAGCGCTGGCGGCAA CCTCGC-CGCGGCGGCGGCGCTGGCGCTGC GCG GCGGCGCGGTCGC-GCC-CCGCGCGC-AGG TGCTGTTCTACCCGG TERM 1832 3686075 - 3686124 + G 74 -14.2 -3.30441 | gap 2, overlap 3686061 3686064 3686083 ACCTCGCCGCGGCGG CGGCGCTGGCGCTGCGCGGCGGCG CGGT CGC-GCCCCGC-GCGCAGGTGCTG TTCTACCCGGTGATC TERM 1833 3686083 - 3686122 + G 72 -14.3 -3.21924 | overlap 3686061 3686064 3686075 GCGGCGGCGGCGCTG GCGC-TGCGCGGCGGCGCG GTCG CGCCCCGC-GCGCAGGTGC TGTTCTACCCGGTGA Swit_3357 3685591 - 3686502 + | alpha/beta hydrolase domain-containing protein TERM 1834 3686495 - 3686553 + T 81 -16.7 -2.70932 | gap 2, overlap 3686457 CGCTGCGCAAGGCGC -TC-GGCTGATCTGGGGGAGGGGCGGCCG GAT CGGCCGCCCCTGTCCGGGTTCAGCCCGGC TCGTTGGCGCGCACC Swit_3358 3688238 - 3686544 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 1835 3688417 - 3688386 - g 79 -15.2 -3.25719 | overlap 3688387 CGACGACATTATCAA GCGCATCGACCGAC TCGA GTCGATCGATGCGA TCCGCCAGCTCGCGG TERM 1836 3688416 - 3688387 - g 79 -18.7 -2.5511 | overlap 3688386 GACGACATTATCAAG CGCATCGACCGAC TCGA GTCGATCGATGCG ATCCGCCAGCTCGCG Swit_3359 3688366 - 3688986 + | hypothetical protein Swit_3360 3688986 - 3690056 + | NADH:flavin oxidoreductase/NADH oxidase Swit_3361 3690704 - 3690057 - | stress responsive alpha-beta barrel domain-containing protein Swit_3362 3691035 - 3690697 - | hypothetical protein Swit_3363 3692033 - 3691032 - | alcohol dehydrogenase Swit_3364 3692207 - 3693034 + | short-chain dehydrogenase/reductase SDR Swit_3365 3693051 - 3693950 + | NAD-dependent epimerase/dehydratase Swit_3366 3694004 - 3694669 + | regulatory protein, TetR TERM 1837 3694968 - 3694986 + G 73 -7.3 -4.15044 | overlap 3694969 GGCCGCATCATGAGC AGCGCCG ATTGA CGGCGCC TTTCTTCACCCCGCG Swit_3367 3694730 - 3695908 + | cytochrome P450-like protein Swit_3368 3696395 - 3695922 - | hypothetical protein Swit_3369 3696567 - 3698315 + | amidohydrolase 3 TERM 1838 3698568 - 3698529 - g 86 -13.7 -3.922 | gap 2, opp_overlap 3698530 3698532 3698533, overlap 3698534 AAACTCCGAACCAAA GCGAA--TGCCGTGCGGCG GATG CGCCGCACGGCAGATTCGT TCGGTCCCGGTTCAA TERM 1839 3698530 - 3698567 + G 82 -17.2 -3.06831 | gap 2, opp_overlap 3698529 3698534, overlap 3698532 3698533 AACTCCGAACCAAAG CGAA--TGCCGTGCGGCG GATG CGCCGCACGGCAGATTCG TTCGGTCCCGGTTCA TERM 1840 3698532 - 3698563 + G 82 -15.8 -3.37344 | opp_overlap 3698529 3698534, overlap 3698530 3698533 CTCCGAACCAAAGCG AATGCCGTGCGGCG GATG CGCCGCACGGCAGA TTCGTTCGGTCCCGG TERM 1841 3698533 - 3698562 + G 79 -19.3 -2.62192 | opp_overlap 3698529 3698534, overlap 3698532 3698530 TCCGAACCAAAGCGA ATGCCGTGCGGCG GATG CGCCGCACGGCAG ATTCGTTCGGTCCCG TERM 1842 3698561 - 3698534 - g 100 -22.8 -3.33399 | opp_overlap 3698533 3698532 3698530, overlap 3698529 CCGAACCAAAGCGAA TGCCGTGCGGCG GATG CGCCGCACGGCA GATTCGTTCGGTCCC Swit_3370 3698485 - 3699111 + | AraC family transcriptional regulator trmB 3699939 - 3699247 - | tRNA (guanine-N(7))-methyltransferase Swit_3372 3700519 - 3699950 - | phospholipid N-methyltransferase-like protein TERM 1843 3700653 - 3700605 - R 76 -7.2 -4.33274 | opp_overlap 3700607, overlap 3700606 GGGACATCACGAAAA GCGGTCCGGGCGCCCCGCGC-GAC CTT GTCCGCGCGGGGC-CCATGGCGGG ATCAGGCCAGCGCGG Swit_3373 3701863 - 3700655 - | S-adenosylmethionine synthetase TERM 1844 3701060 - 3701039 - G 74 -14.4 -3.28712 | opp_overlap 3701040, overlap 3701040 GTCCTTGCCCGAGAA GGCGCCGC CGCCAT GCGGCGCC GCGCCGCCATAGGTG TERM 1845 3701062 - 3701040 - G 73 -16.2 -2.57132 | opp_overlap 3701040, overlap 3701039 TCCTTGCCCGAGAAG GCGCCGCCGC CAT GCGGCGCCGC GCCGCCATAGGTGTC Swit_3374 3703714 - 3701948 - | apolipoprotein N-acyltransferase TERM 1846 3703160 - 3703124 - G 72 -13.5 -3.16668 | opp_overlap 3703140 GAACAGCGGGATGAA GGCGAAGGGGCTGGGCG CCG CGACCGGCGCCGTCGCC GCCTGCGGCTCCATT Swit_3375 3703836 - 3704123 + | chaperonin Cpn10 groEL 3704215 - 3705864 + | chaperonin GroEL TERM 1847 3705957 - 3705993 + T 100 -15.2 -4.58395 | gap 1, opp_overlap 3705956 3705957, overlap 3705958 3705962 CCGGTCATCGGAAAC G-GGAAGGGCCGGGGGA GCGA TCCCCGGGCCCTTTCTC TTTTTGCGGCATCAG TERM 1848 3705958 - 3705991 + T 100 -18.9 -3.90762 | opp_overlap 3705957 3705956, overlap 3705957 3705962 CGGTCATCGGAAACG GGAAGGGCCGGGGGA GCGA TCCCCGGGCCCTTTC TCTTTTTGCGGCATC TERM 1849 3705962 - 3705987 + T 100 -16.1 -4.55887 | opp_overlap 3705957 3705956, overlap 3705958 3705957 CATCGGAAACGGGAA GGGCCGGGGGA GCGA TCCCCGGGCCC TTTCTCTTTTTGCGG Swit_3377 3707101 - 3706010 - | hypothetical protein Swit_3378 3708783 - 3707098 - | ABC transporter related TERM 1850 3708334 - 3708316 - G 70 -12.4 -3.2794 | GGCGATCCAGATCAA GGCCGCGA GGA TCGCGACC GCCGTGACGATCGCC Swit_3379 3709454 - 3708777 - | glycosyl transferase family protein Swit_3380 3710125 - 3709451 - | glycosyl transferase family protein Swit_3381 3711119 - 3710118 - | Hpr(Ser) kinase/phosphatase TERM 1851 3710387 - 3710421 + g 73 -12 -3.40403 | opp_overlap 3710415 CGATCGGCGCGGACC GGACGACGTCGGCGCC GGC GGCGATGAAGACGTCC TTGTCGTCGCCCGGC Swit_3382 3711535 - 3711128 - | hypothetical protein Swit_3383 3712587 - 3711658 - | hypothetical protein Swit_3384 3714347 - 3712575 - | resolvase domain-containing protein Swit_3385 3714623 - 3714369 - | hypothetical protein Swit_3386 3715077 - 3714718 - | transcriptional modulator of MazE/toxin, MazF Swit_3387 3715298 - 3715074 - | hypothetical protein Swit_3388 3715982 - 3716353 + | hypothetical protein TERM 1852 3716466 - 3716496 + F 83 -14.8 -3.48395 | opp_overlap 3716467, overlap 3716467 GTCCGCAGACAAGTA AGCCGCAACAACGA GAA TTGTTGTTGCGGCG TTCTGTAAGACCAAT TERM 1853 3716467 - 3716495 + F 86 -18.3 -2.68823 | opp_overlap 3716467, overlap 3716466 TCCGCAGACAAGTAA GCCGCAACAACGA GAA TTGTTGTTGCGGC GTTCTGTAAGACCAA TERM 1854 3716495 - 3716467 - f 89 -16.1 -3.49618 | opp_overlap 3716467 3716466 TCCGCAGACAAGTAA GCCGCAACAACGA GAA TTGTTGTTGCGGC GTTCTGTAAGACCAA TERM 1855 3716538 - 3716562 + F 78 -4.9 -4.77036 | GCTGACGAGCAGACG CCGCCCGGT ATCCTTA ATCGAGCGG TTTTTCGTCATGACC Swit_3389 3716572 - 3717306 + | hypothetical protein TERM 1856 3717916 - 3717933 + G 75 -8.3 -4.21141 | CAGGAGATGCTGTTC GACGCGC ATGC GCGCGGC TTTGCTTTCTTCGGC Swit_3390 3717388 - 3718893 + | integrase catalytic subunit Swit_3391 3718880 - 3719608 + | IstB ATP binding domain-containing protein Swit_3392 3720850 - 3720428 - | MarR family transcriptional regulator Swit_3393 3720872 - 3723136 + | ferredoxin Swit_3394 3723936 - 3723139 - | regulatory protein, IclR Swit_3395 3724212 - 3726353 + | TonB-dependent receptor TERM 1857 3726354 - 3726403 + F 72 -7.8 -4.14627 | gap 2, opp_overlap 3726384 CATCTGCCTTTCTGA TCGGGACCGATCGGGGCGCCGG ACAAAGAA CCGGCGCCCCGAA-GC-CACGA TTGTTTCTCTCGCGG TERM 1858 3727139 - 3727170 + G 72 -8.6 -4.07885 | gap 1, overlap 3727140 TGCGCTTGTCTGTCC GGTCGGCGCCGATCG CAA CGA-CGGCGACGGCA TTTTCGGCGCCCATC Swit_3396 3726429 - 3727475 + | vanillate monooxygenase Swit_3397 3728733 - 3727522 - | acyl-CoA dehydrogenase domain-containing protein TERM 1859 3727714 - 3727663 - G 100 -18.7 -3.85698 | GGGCGCTTCCAGAAA GGCGC-CGATCAGCGCGGGTGCCGC ATCG GCCCCGCCCGCGC-GATCGAGCGCC GCCGGGCCGAGCAGA TERM 1860 3728577 - 3728612 + g 83 -15.4 -3.57792 | gap 1, opp_overlap 3728576 3728575 GGATGCCGGCAAAGC CCGCGTCCGCCTTGGCG CGC TGCCA-GGCGCGCGCGG TTTCGAGGTCGGTGC Swit_3398 3729841 - 3728741 - | acyl-CoA dehydrogenase domain-containing protein Swit_3399 3731579 - 3729855 - | AMP-dependent synthetase and ligase TERM 1861 3731455 - 3731473 + g 75 -6.7 -4.4715 | gap 1, overlap 3731441 3731456 ATCGCGCGCAGCGTC GT-GGGCG CCTG CGCCCAAC TTTTATAGGTTCGGC Swit_3400 3732789 - 3731608 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_3401 3733951 - 3732809 - | Acetyl-CoA acetyltransferase-like protein TERM 1862 3733197 - 3733248 + g 78 -13.6 -3.55444 | opp_overlap 3733197 CCCGAAACCCGGAAA GCGCGCGAGCTGCTATGGTCCGCC ATCT GGCTGATCATCGTCGCTTCCGCGC TTTCGCCGGTGCCGG Swit_3402 3734364 - 3733954 - | hypothetical protein Swit_3403 3735311 - 3734361 - | short-chain dehydrogenase/reductase SDR Swit_3404 3735482 - 3736342 + | 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase TERM 1863 3736528 - 3736494 - g 73 -12.8 -3.45023 | opp_overlap 3736494 3736515 TGATCATTATCAGAA TGCCCGCATCGCCG ACATTTG CGCCGAGGCGGGCA AGGCCGTGGGCGTTT TERM 1864 3736515 - 3736540 + G 71 -2.5 -4.56961 | gap 1, opp_overlap 3736494, overlap 3736538 CATCGCCGACATTTG CGCCGA-GGC GGGCAAG GCCGTGGGCG TTTTCTATCGCTATT Swit_3405 3736384 - 3737007 + | TetR family transcriptional regulator TERM 1865 3737003 - 3737051 + T 100 -16.7 -4.56775 | overlap 3737006 3737007 GCAACGCGCTCCAGA TGTAGGGGAACGGCCGATCTGAT CGC ATCGGATCGGCCGCTCCCGGTCA TTTTTCAACGGCGAT TERM 1866 3737006 - 3737048 + T 89 -17 -3.23708 | overlap 3737003 3737007 ACGCGCTCCAGATGT AGGGGAACGGCCGATCTGAT CGC ATCGGATCGGCCGCTCCCGG TCATTTTTCAACGGC TERM 1867 3737007 - 3737047 + T 91 -20.5 -2.53903 | overlap 3737006 3737003 CGCGCTCCAGATGTA GGGGAACGGCCGATCTGAT CGC ATCGGATCGGCCGCTCCCG GTCATTTTTCAACGG Swit_3406 3739274 - 3737106 - | TonB-dependent receptor Swit_3407 3739460 - 3740068 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_3408 3740031 - 3741284 + | hypothetical protein Swit_3409 3741295 - 3742338 + | vanillate monooxygenase Swit_3410 3742364 - 3743437 + | Rieske (2Fe-2S) domain-containing protein Swit_3411 3743452 - 3744324 + | LuxR family transcriptional regulator Swit_3412 3745661 - 3744516 - | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein Swit_3413 3746709 - 3745672 - | vanillate monooxygenase Swit_3414 3747520 - 3746732 - | cyclase family protein TERM 1868 3747458 - 3747479 + g 73 -7.3 -4.11692 | gap 1 CTTCGGCCGGAACGG CGGCG-GATC GGA GATCACGTCG TTTTCGAGATAGATG Swit_3415 3748449 - 3747523 - | hypothetical protein Swit_3416 3749477 - 3748449 - | vanillate monooxygenase Swit_3417 3750627 - 3749488 - | monooxygenase, FAD-binding Swit_3418 3751613 - 3750624 - | glyoxalase/bleomycin resistance protein/dioxygenase Swit_3419 3752697 - 3751621 - | TonB-dependent receptor Swit_3420 3754903 - 3752834 - | resolvase domain-containing protein TERM 1869 3754648 - 3754618 - G 71 -11.1 -3.62096 | GGCCATTACGGGAAA GGCGCGATGCGTC CAAGC AAAGCACCGCGCC AACCTTGCCCGTGCA Swit_3421 3755358 - 3754900 - | hypothetical protein Swit_3422 3756340 - 3755303 - | TonB-dependent receptor, plug TERM 1870 3755785 - 3755738 - GR 90 -15.5 -3.71848 | gap 1 CCGGTCGACGAAGAA GCCGGCGGCGCGGACCGCGACC TTGCC GGGCACGATC-GCCCCGCCGAC CCCGGCTTCGCCCTG Swit_3423 3757392 - 3756433 - | LysR family transcriptional regulator Swit_3424 3757812 - 3757471 - | hypothetical protein Swit_3425 3758339 - 3757809 - | outer membrane-like protein TERM 1871 3758854 - 3758799 - g 85 -17.5 -3.15544 | gap 3, opp_overlap 3758800, overlap 3758802 GCGGATCGTGATCAA CGAGGCGCTGGGCCGCGCCCG-CGCCGC CCG GCGCCGCCGGGCGCGGCTCGACGC--CG ATTCGATAACCGATC TERM 1872 3758800 - 3758855 + G 95 -22.4 -3.05935 | gap 1, opp_overlap 3758799 3758802 CGGATCGTGATCAAC GAGGCGCTGGGCCGCGCCCG-CGCCGC CCG GCGCCGCCGGGCGCGGCTCGACGCCGA TTCGATAACCGATCT TERM 1873 3758853 - 3758802 - g 95 -27.2 -2.78216 | gap 1, opp_overlap 3758800, overlap 3758799 GATCGTGATCAACGA GGCGCTGGGCCGCGCCCG-CGCCGC CCG GCGCCGCCGGGCGCGGCTCGACGCC GATTCGATAACCGAT Swit_3426 3758545 - 3759234 + | ECF subfamily RNA polymerase sigma-24 factor Swit_3427 3760524 - 3759238 - | MscS mechanosensitive ion channel Swit_3428 3761879 - 3760569 - | citrate transporter Swit_3429 3762015 - 3762830 + | hypothetical protein Swit_3430 3763207 - 3764073 + | hypothetical protein TERM 1874 3764095 - 3764122 + F 100 -19.2 -5.06816 | opp_overlap 3764095 CCTCGCTGGAGGGAA GGGCCGGTCCTC GCGA GAGGATCGGCCC TTTTTCTTCGCGCCT TERM 1875 3764122 - 3764095 - f 88 -17 -3.05384 | opp_overlap 3764095 CCTCGCTGGAGGGAA GGGCCGGTCCTC GCGA GAGGATCGGCCC TTTTTCTTCGCGCCT Swit_3431 3764155 - 3765339 + | patatin Swit_3432 3765360 - 3766145 + | 3-hydroxybutyrate dehydrogenase Swit_3433 3766226 - 3766858 + | hypothetical protein Swit_3434 3766861 - 3768147 + | amidohydrolase Swit_3435 3768635 - 3768270 - | response regulator receiver protein TERM 1876 3768397 - 3768438 + g 82 -14.6 -3.47227 | gap 3, opp_overlap 3768396 3768397, overlap 3768398 GTCGCGAAGATGAAG C-GCTTGCCGGCGTCGCGCAG GTG CTGCGCGA--CCGGCAGGCTG TTCTCGTCCTTCAGG TERM 1877 3768398 - 3768436 + g 89 -18.3 -3.30731 | gap 2, opp_overlap 3768396 3768397, overlap 3768397 TCGCGAAGATGAAGC GCTTGCCGGCGTCGCGCAG GTG CTGCGCGA--CCGGCAGGC TGTTCTCGTCCTTCA TERM 1878 3768885 - 3768868 - H 71 -11.3 -3.53012 | opp_overlap 3768868 TCTGTTTTTCCGAAA CGGATGC GGAT GCATCCG TTTCGGACAGACCAC TERM 1879 3768868 - 3768885 + H 71 -11.3 -3.53012 | opp_overlap 3768868 TCTGTTTTTCCGAAA CGGATGC GGAT GCATCCG TTTCGGACAGACCAC Swit_3436 3769135 - 3770526 + | XRE family transcriptional regulator Swit_3437 3771595 - 3770639 - | aldo/keto reductase Swit_3438 3772795 - 3771710 - | mannose-1-phosphate guanylyltransferase (GDP) Swit_3439 3772892 - 3774280 + | sugar transferase TERM 1880 3774491 - 3774541 + G 74 -16.7 -2.78816 | overlap 3774488 TGACCCTCGCCTGCG CGCTGACCGCGCTCTGGTGCGCG CTGGT CGCGCGCTACGGCGCGGGCGGCA TATCGTCGAGCGTGG TERM 1881 3776160 - 3776124 - g 70 -12.1 -3.29144 | CCACCTCGTCCAGAA CGCGATCGACGCGAGCG ATC CGGCCGCGCCGGTCGAG GTCGCGATCGGCCGG Swit_3440 3774310 - 3776436 + | multi-sensor signal transduction histidine kinase TERM 1882 3776707 - 3776747 + G 74 -14.6 -3.01712 | gap 1 CGGGCCATGGCGCGC G-CGAAGGCGCCCTCCGGG CCGT CGCGGCGGGCGCCTACGAC TATTACCACAAGCCC Swit_3441 3776433 - 3777788 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 1883 3777999 - 3778030 + G 79 -10.8 -4.09685 | gap 1 ATCCCGCCTATGTCT GGCGC-GACCATGGC CTC GCCGTGGCCCGCGTC TTTTCGCCGCTGCCG Swit_3442 3777896 - 3778732 + | hypothetical protein Swit_3443 3780316 - 3778880 - | integral membrane sensor signal transduction histidine kinase TERM 1884 3779519 - 3779543 + g 75 -16.4 -2.82623 | overlap 3779517 3779539 GAGGTTGCCGGCATG GCGGCGGGCC TCCTC GGCCTGCCGC TCGTTATGGGCGAGC Swit_3444 3781140 - 3780478 - | two component transcriptional regulator Swit_3445 3781481 - 3781173 - | hypothetical protein TERM 1885 3781318 - 3781333 + g 71 -10.4 -3.78775 | CCGTCGACCCGGCCC TGCGCG CGGG CGCGCA TTTCCTGATAGGGAA Swit_3446 3781571 - 3783361 + | ABC transporter related TERM 1886 3783588 - 3783573 - T 70 -11.8 -3.14468 | TGCGAGGATAGCCAA GCGGGC GGAT GCCCGC GCCGGCGCCTGAGGC TERM 1887 3783647 - 3783613 - T 100 -17.2 -4.88918 | opp_overlap 3783609 3783613 TGAGGCCAAACAAAA TCAACCATCAGCGCCG GCA CGGCGATGATGGTGGA TGACTTCGTCAATAA TERM 1888 3783613 - 3783647 + T 83 -17.2 -2.57244 | opp_overlap 3783613, overlap 3783609 TGAGGCCAAACAAAA TCAACCATCAGCGCCG GCA CGGCGATGATGGTGGA TGACTTCGTCAATAA Swit_3447 3783897 - 3783613 - | chorismate mutase Swit_3448 3784019 - 3785044 + | polyprenyl synthetase TERM 1889 3785172 - 3785195 + F 93 -18.2 -3.32844 | opp_overlap 3785187 GTTACCCACCCCTAC GCCCCTCCCT TGAA AGGGAGGGGC TTATAGGCTCAAACC TERM 1890 3785216 - 3785187 - f 74 -12.2 -3.53012 | opp_overlap 3785172 GCCCCTCCCTTGAAA GGGAGGGGCTTA TAGGCT CAAACCCCTCCC CATGCTGCCGATCGA TERM 1891 3786877 - 3786923 + G 73 -15.9 -2.62983 | gap 2, overlap 3786885 GGCGCGCGCATCCTG TCGGCGG-C-GCCGATCGACCCC GAC GAGGTCGAGCGGCTGTTCGCCGA TCATATCGAGGTCCG TERM 1892 3786885 - 3786913 + G 74 -14.5 -3.03441 | overlap 3786877 CATCCTGTCGGCGGC GCCGATCGACCCC GAC GAGGTCGAGCGGC TGTTCGCCGATCATA Swit_3449 3785218 - 3787662 + | ATP-dependent helicase HrpB TERM 1893 3787672 - 3787645 - f 72 -7.6 -4.24342 | gap 1 CTGCGGACCAAGAAA GCGGCGCAGCGTC CTT GACGGGGC-CCGC CGCGCTGCGGCATGG TERM 1894 3787837 - 3787809 - g 70 -14.5 -2.73875 | overlap 3787806 GGTGCTCGAATATGA GCCGACCGAGGCG AAG CGCCCCGATCCGC TGACCGGCTGGGCCG Swit_3450 3787684 - 3788022 + | ETC complex I subunit region Swit_3451 3788723 - 3788202 - | NUDIX hydrolase Swit_3452 3789400 - 3788720 - | hypothetical protein Swit_3453 3790299 - 3789400 - | hypothetical protein TERM 1895 3790212 - 3790187 - G 100 -6.2 -6.07627 | gap 2, opp_overlap 3790170, overlap 3790188 3790189 AGGGCGAAAAAAAAA GTCCCCCTCCCT TTCA AGGGAGGGG--C TAGGGGTGGGTGGCG TERM 1896 3790213 - 3790188 - G 75 -8.9 -4.22949 | opp_overlap 3790170, overlap 3790187 3790189 GGGCGAAAAAAAAAG TCCCCCTCCCT TTCA AGGGAGGGGCT AGGGGTGGGTGGCGG Swit_3454 3790948 - 3790355 - | LemA family protein Swit_3455 3791084 - 3791512 + | large conductance mechanosensitive channel protein TERM 1897 3791989 - 3792007 + F 95 -16 -3.84246 | GCGCGTTCGCGCTTG CGGAGCCC TGC GGGCTCCG TTTCCTGCTTCACCC Swit_3456 3792229 - 3794046 + | hypothetical protein TERM 1898 3794050 - 3794072 + F 70 -9.9 -3.61178 | gap 1, opp_overlap 3794047 3794048, overlap 3794050 GCGAAGGCATAACTT C-CCTCTCCC CTTG GGGAGAGGAG TTTGACCTCGATCCG TERM 1899 3794086 - 3794144 + F 81 -14 -3.65812 | gap 3, opp_overlap 3794117 3794118 3794128, overlap 3794118 AGTTTGACCTCGATC CGCGATGCCCC-CTTCCGT-CATTCCCGC GAAA GCGGGAATCCACGGTTGCGGGGCATC-CG TTCTCTTGCGGGCCG Swit_3457 3794267 - 3794965 + | glutathione S-transferase domain-containing protein Swit_3458 3795298 - 3796488 + | GDSL family lipase TERM 1900 3797449 - 3797426 - g 71 -11.6 -3.62046 | overlap 3797427 CGAGCTGCTCAACAA CGCGCCGACG GTGA CGCCGGCGCC GTGCATCGAGCCGGT TERM 1901 3797448 - 3797427 - g 70 -15.1 -2.77013 | overlap 3797426 GAGCTGCTCAACAAC GCGCCGACG GTGA CGCCGGCGC CGTGCATCGAGCCGG Swit_3459 3796485 - 3797897 + | hypothetical protein Swit_3460 3797972 - 3799369 + | membrane bound O-acyl transferase, MBOAT family protein Swit_3461 3799383 - 3799712 + | hypothetical protein TERM 1902 3799777 - 3799724 - T 81 -16.8 -2.71364 | gap 2 GTAGCCCCGGAAGTA CGGCCTCCCTCCCTCGTCATTCCCGC TTTC GCGGGAATGAC--GGTTGGGATGCCG ACCCATCCTAAGCCA Swit_3462 3800258 - 3799785 - | ybaK/ebsC protein TERM 1903 3800421 - 3800398 - R 100 -21 -3.64822 | ACCTTCTTACGCAAA GGGCCCGGCG TTTC CGCCGGGCCC TCCGCACCCTCTCCG Swit_3463 3801018 - 3800449 - | cell wall hydrolase, SleB Swit_3464 3801402 - 3802622 + | hypothetical protein TERM 1904 3802847 - 3802835 - f 70 -7.7 -4.07568 | opp_overlap 3802835 3802834 GCGCGTCCGGTAAAA CGATC CCC GATCG ATATCTTTCGCCGCC TERM 1905 3803227 - 3803254 + G 74 -13.4 -3.27923 | GCTGTTCTACGGCCT CGGGCTGATCGC CTCG GCGATCCGCCTG TTCGTCCTGTTCGGG TERM 1906 3804164 - 3804127 - g 77 -15.5 -3.15544 | CCTGACCGGCAGCAA GCGCGCCGCCACCGGCG TCGC CGCCTATGACGGCACAC GCTGGGGCGGAGAGA Swit_3465 3802991 - 3804193 + | diguanylate cyclase TERM 1907 3804386 - 3804361 - T 100 -20.5 -4.72272 | CGCCGCCACGAAAAA GGCCCGCAGGA TCGC TCCTGCGGGCC CTTGAAAGCGTCGGC Swit_3466 3804760 - 3804410 - | hypothetical protein TERM 1908 3804961 - 3804972 + r 76 -7.2 -4.3898 | TACTGTCCTCCCTTT GGCG TTCC CGCC TTTTCTCCCCGTCAT TERM 1909 3805174 - 3805139 - R 100 -22 -3.6502 | opp_overlap 3805139 3805143 3805144, overlap 3805145 CACCGCCCACCCAAA GAAAAACCCCGCCGGA TCGC TCCGGCGGGGCCTTTC TCGTTCGACGATTCG TERM 1910 3805139 - 3805174 + r 84 -17.6 -2.72379 | opp_overlap 3805139 3805145, overlap 3805143 3805144 CACCGCCCACCCAAA GAAAAACCCCGCCGGA TCGC TCCGGCGGGGCCTTTC TCGTTCGACGATTCG TERM 1911 3805143 - 3805170 + r 86 -12.6 -4.05446 | opp_overlap 3805139 3805145, overlap 3805139 3805144 GCCCACCCAAAGAAA AACCCCGCCGGA TCGC TCCGGCGGGGCC TTTCTCGTTCGACGA TERM 1912 3805144 - 3805169 + r 84 -16.1 -3.02946 | opp_overlap 3805139 3805145, overlap 3805143 3805139 CCCACCCAAAGAAAA ACCCCGCCGGA TCGC TCCGGCGGGGC CTTTCTCGTTCGACG TERM 1913 3805168 - 3805145 - R 100 -19.6 -5.30616 | opp_overlap 3805144 3805143 3805139, overlap 3805139 CCACCCAAAGAAAAA CCCCGCCGGA TCGC TCCGGCGGGG CCTTTCTCGTTCGAC Swit_3467 3809479 - 3805208 - | DNA-directed RNA polymerase subunit beta' TERM 1914 3806054 - 3806066 + g 82 -9.1 -4.43309 | GCGGCCCGAAACCTT CGCGA TGA TCGCG TTTTCCTTGGGCTTG TERM 1915 3808536 - 3808550 + g 70 -12.8 -3.28712 | GCGCCCGTGATCGTC CGGCCG CGG CGGCCG TTGTCGAACAGCGCG Swit_3468 3813923 - 3809556 - | DNA-directed RNA polymerase, beta subunit TERM 1916 3810075 - 3810096 + g 74 -12.3 -3.61398 | gap 1, opp_overlap 3810074 GGCGCCGTCGAACAC CGGCGTCGCC ATC GGC-ACGCCG TTCTTCAGCAGGCCC TERM 1917 3812907 - 3812940 + g 74 -13.9 -3.28712 | gap 1, opp_overlap 3812900 CGGGAAGACGACCTC GCCGGTG-TCGGCGTT GAC GACGTCGAACGCCGGC TTCTGGCCGCGCCAG TERM 1918 3814036 - 3814008 - R 91 -11.7 -4.30576 | CCCCCACGACGAAAA GTGCGGGTCCG GGCTGAT CGGAACCGCAC TGCCAGCGTTCTGGA Swit_3469 3815408 - 3814377 - | diguanylate cyclase TERM 1919 3814802 - 3814767 - G 72 -13.3 -3.15544 | gap 1 GTCGACGTCGACGAA GGCGACGCTGAAGCCG CCGTC CGGCCGCAG-GTCGCC GGCATGGGCCTGCAT Swit_3470 3815615 - 3816607 + | hypothetical protein Swit_3471 3816688 - 3817311 + | hypothetical protein Swit_3472 3817319 - 3818386 + | hypothetical protein Swit_3473 3818781 - 3818665 - | hypothetical protein Swit_3474 3818981 - 3819670 + | FRG domain-containing protein Swit_3475 3821513 - 3819738 - | citrate transporter TERM 1920 3821627 - 3821608 - R 70 -7.8 -4.08557 | GCGGGTAAACAATAA GCTGGAGC GGCC GCTCTAGC CCGGAACGTCGGGCG TERM 1921 3821711 - 3821675 - R 100 -21 -4.08767 | gap 1, opp_overlap 3821680, overlap 3821676 3821680 CGGACGCGGGCAAAA GGAAAGGGCGGCCTCCC CTCG GGGAGACCGCCCTT-CC TGAAATCGCAAGAAG TERM 1922 3821711 - 3821676 - R 100 -23.4 -3.05046 | opp_overlap 3821680, overlap 3821675 3821680 GGACGCGGGCAAAAG GAAAGGGCGGCCTCCC CTCG GGGAGACCGCCCTTCC TGAAATCGCAAGAAG TERM 1923 3821680 - 3821707 + r 91 -18.4 -3.16564 | opp_overlap 3821675 3821676 3821680 GCGGGCAAAAGGAAA GGGCGGCCTCCC CTCG GGGAGACCGCCC TTCCTGAAATCGCAA TERM 1924 3821707 - 3821680 - R 100 -20.6 -4.19735 | opp_overlap 3821680, overlap 3821675 3821676 GCGGGCAAAAGGAAA GGGCGGCCTCCC CTCG GGGAGACCGCCC TTCCTGAAATCGCAA rplL 3822116 - 3821736 - | 50S ribosomal protein L7/L12 rplJ 3822688 - 3822173 - | 50S ribosomal protein L10 TERM 1925 3822730 - 3822708 - R 70 -12.7 -2.8294 | opp_overlap 3822707, overlap 3822705 TACTCCTTAGAACCA CCCCTGCAG CACAT CCGCAGGGG CTGTTGAGCCAAGGG Swit_3478 3823542 - 3823000 - | cytochrome B561 TERM 1926 3823544 - 3823600 + r 95 -13.1 -4.28361 | gap 2 AGGGCCTCGGTCATG GCGTCATCCTGTGCGGGGCACGGCCGG ATCGG CCGGACATGCCCCG-ATAGGATCA-GC TTTTGATCCGGTTCG Swit_3479 3825533 - 3823596 - | acetyl-coenzyme A synthetase TERM 1927 3826404 - 3826353 - g 87 -22.2 -2.78384 | gap 1, overlap 3826329 CCGGCGGCTACGACA GCTTCGAGCGGCAGCGGGCCGAGCG CGC CGCCCAGCTCGCCGCCGCCCGC-GC CGCGCAGGACGCGCA Swit_3480 3825665 - 3827569 + | ABC transporter related Swit_3481 3829069 - 3827675 - | KAP P-loop domain-containing protein TERM 1928 3827794 - 3827805 + g 77 -4.4 -4.78326 | TAAAGTTTTGTTCCA TCTC TTCG GAGA TTTCTTTATTTAGGC TERM 1929 3829512 - 3829468 - g 71 -2.8 -4.58395 | overlap 3829471 GCCAGGGCGCAAAAA CTACTCGACCACATTCTCGC TGCCG ACGAAGATGAAATCGAGTTG GATGATGAAGGAATC Swit_3482 3829345 - 3830652 + | hypothetical protein TERM 1930 3830714 - 3830725 + F 73 -3 -4.74103 | AGAAATTAAGCGGTT TTCA CGCA TGAA TTTTTGAATTCCGGG TERM 1931 3831538 - 3831555 + G 75 -8.3 -4.21141 | CAGGAGATGCTGTTC GACGCGC ATGC GCGCGGC TTTGCTTTCTTCGGC Swit_3483 3831010 - 3832515 + | integrase catalytic subunit Swit_3484 3832502 - 3833230 + | IstB ATP binding domain-containing protein Swit_3485 3833641 - 3833300 - | hypothetical protein Swit_3486 3834252 - 3833722 - | hypothetical protein Swit_3487 3834491 - 3834781 + | hypothetical protein mdoG 3834778 - 3836940 + | glucan biosynthesis protein G Swit_3489 3837074 - 3838948 + | glucosyltransferase MdoH TERM 1932 3839010 - 3839022 + G 78 -9.1 -4.2704 | opp_overlap 3839005 TGGGACATGAGGTCG GGCTC GAC GAGCC TTTGTTCGTCATCGC Swit_3490 3838985 - 3839836 + | 2-dehydro-3-deoxyphosphooctonate aldolase Swit_3491 3841159 - 3839837 - | glycosyl transferase, group 1 Swit_3492 3842369 - 3841197 - | glycosyl transferase, group 1 Swit_3493 3842456 - 3843118 + | ABC transporter related Swit_3494 3843232 - 3844395 + | polysaccharide export protein TERM 1933 3844404 - 3844423 + T 100 -16.4 -4.57073 | AAACTGATTCGGATC GGGCGGGC GCCG GCCCGCCC TTTTTCCGGGCGCTC TERM 1934 3844512 - 3844537 + T 72 -4.5 -4.67234 | opp_overlap 3844511, overlap 3844516 3844521 GATGTGCATAGAAGG CCCCCTCACCG GCGG CGGCGAGTTGG TTTTTCCGGTTCGCT TERM 1935 3846417 - 3846402 - T 79 -9 -4.15565 | TTCATCACTGGAAAA CAGACC CTCG GGTCTG TGCGCCTGAGCTGGC TERM 1936 3850216 - 3850191 - T 84 -16.9 -2.73275 | overlap 3850188 CACCCACATACACCA CCCCGCAAGAC AGCA GTCTCGCGGGG CTAAAATCGTTCCGG Swit_3495 3850625 - 3850236 - | hypothetical protein TERM 1937 3850391 - 3850402 + g 73 -7.2 -4.20106 | CGGCCAGGCCAGCTA GCCC ATTA GGGC TTTTGCATCCGGTTT TERM 1938 3850655 - 3850645 - H 86 -8.2 -4.56597 | opp_overlap 3850649, overlap 3850646 3850647 TCCGCTGCCTAAAAA GGCG CGT CGCC CTCCCTCGCGCGACG TERM 1939 3852352 - 3852377 + G 70 -14.7 -2.78816 | CCCGGTGCGATTCTC GCGCCGGTCAC GGGC GTGGTCGGCGC TCTCCTCGGCGGTGG Swit_3496 3850690 - 3852795 + | hypothetical protein TERM 1940 3853164 - 3853210 + G 74 -15.8 -2.79327 | gap 1, overlap 3853168 CCCGCTCACCGAGAG TGAGCTGCGGGCGTCGGTCGG GGAGAG CCGCCCGAC-CCCGCCGCGCA GTTTCCGTCCGGTCG TERM 1941 3853168 - 3853211 + G 74 -12.5 -3.65902 | overlap 3853164 CTCACCGAGAGTGAG CTGCG-GGCGTCGGTCGGG GAGAGCCG CCCGACCC-CGCCGCGCAG TTTCCGTCCGGTCGA Swit_3497 3852859 - 3853383 + | hypothetical protein TERM 1942 3853532 - 3853560 + F 100 -18.9 -4.8622 | overlap 3853531 TTGCTTACCCCCAAG CCGCCGCCGCT CTCTACA AGCGGCGGCGG TTTTTCGTTGGGGCC TERM 1943 3854626 - 3854678 + G 73 -12.5 -3.53091 | overlap 3854627 3854629 ACGGGGGCGGTCACC GGCCTGCTCGGCGGGGTGGTCGGCA ACC TGCCCGGCACGCCGCAGAGCGGCTC TTTCGCAGGGCCGCT TERM 1944 3854627 - 3854676 + G 79 -14.9 -3.34398 | gap 1, overlap 3854626 3854629 CGGGGGCGGTCACCG GCCTGCTCGGCGGGGTGGTCGGCA ACC TGCCCGGCACGCCGCAGAGC-GGC TCTTTCGCAGGGCCG Swit_3498 3853873 - 3855717 + | triple helix repeat-containing collagen TERM 1945 3856074 - 3856120 + G 74 -15.8 -2.79327 | gap 1, overlap 3856078 CCCGCTCACCGAGAG TGAGCTGCGGGCGTCGGTCGG GGAGAG CCGCCCGAC-CCCGCCGCGCA GTTTCCGTCCGGTCG TERM 1946 3856078 - 3856121 + G 74 -12.5 -3.65902 | overlap 3856074 CTCACCGAGAGTGAG CTGCG-GGCGTCGGTCGGG GAGAGCCG CCCGACCC-CGCCGCGCAG TTTCCGTCCGGTCGA Swit_3499 3855799 - 3856293 + | hypothetical protein TERM 1947 3856442 - 3856470 + T 100 -17.5 -4.54727 | TTGCTTACCCCCAAG CCGCCGTCGCT CCCTACA AGCGACGGCGG TTTTCGTTTCAGACG Swit_3500 3856934 - 3856479 - | peptidase A24A, prepilin type IV Swit_3501 3857524 - 3856964 - | 2OG-Fe(II) oxygenase TERM 1948 3857134 - 3857114 - G 78 -6.1 -4.59773 | overlap 3857116 CTGCAGCCCGAAAAA TTCGAAGGC GCC GCCTTCATA ATCGGCCGGGTCCGA TERM 1949 3857610 - 3857562 - R 100 -16.8 -4.11216 | gap 1, opp_overlap 3857563 3857563, overlap 3857563 TGCGTATCCGCAAAA CGGTCAGGGCAAGCCGCGCGCAT TTGA AT-CGCGCGGCTTGCTCTGAACC TTTGTTGCCGCATTG TERM 1950 3857563 - 3857609 + r 100 -22.5 -3.09556 | gap 1, opp_overlap 3857562 3857563, overlap 3857563 GCGTATCCGCAAAAC GGTCAGGGCAAGCCGCGCGCAT TTGA AT-CGCGCGGCTTGCTCTGAAC CTTTGTTGCCGCATT TERM 1951 3857609 - 3857563 - R 93 -20.3 -3.06515 | gap 1, opp_overlap 3857563 3857563, overlap 3857562 GCGTATCCGCAAAAC GGTCAGGGCAAGCCGCGCGCAT TTGA AT-CGCGCGGCTTGCTCTGAAC CTTTGTTGCCGCATT TERM 1952 3857563 - 3857610 + r 100 -22.3 -4.1673 | opp_overlap 3857563 3857562, overlap 3857563 GCGTATCCGCAAAAC GG-TCAGGGCAAGCCGCGCGCAT TTGA AT-CGCGCGGCTTGCTCTGAACC TTTGTTGCCGCATTG Swit_3502 3859328 - 3857667 - | polypeptide-transport-associated domain-containing protein TERM 1953 3859516 - 3859459 - H 78 -14.6 -3.06796 | overlap 3859444 CCGGAGCGGATGGAA TCCGGGCGACGCCCGCCCTGCCGCGC GGGCGA GCGCCGGTCCGCGCACGTCGCCCGGA AAACAAGGCGAAATC TERM 1954 3859534 - 3859523 - H 72 -7.2 -4.17048 | overlap 3859524 3859530 TCGCCCGGAAAACAA GGCG AAAT CGCC GTCGCCGGAAACGGA Swit_3503 3860004 - 3861017 + | parB-like partition protein TERM 1955 3861015 - 3861065 + T 79 -8.6 -4.31397 | gap 4, opp_overlap 3861001 3861023, overlap 3861013 3861016 ATGACGCGGGCGGCG T-GACTAGAGCGGTTCACGATCCGAT TGC ATCGGATCG-G--CCGCTCTAGGCTA TTGTTTTATCGCGGT TERM 1956 3861016 - 3861063 + T 84 -13.7 -3.75581 | gap 3, opp_overlap 3861001 3861023, overlap 3861015 3861013 TGACGCGGGCGGCGT GACTAGAGCGGTTCACGATCCGAT TGC ATCGGATCG-G--CCGCTCTAGGC TATTGTTTTATCGCG Swit_3504 3862145 - 3861261 - | response regulator receiver protein TERM 1957 3862406 - 3862432 + r 84 -16.7 -3.01712 | opp_overlap 3862396 AATAACTTCCGTTGC CGACGATCACC GACGA GGTGATCGTCG TATTGGGCAGCGGCA Swit_3505 3862799 - 3862386 - | TadE family protein TERM 1958 3862737 - 3862779 + g 100 -17.1 -3.90744 | gap 1, opp_overlap 3862730 GAACATCAGCATGAT GAGCGCCGGGGCGATC-AAT GCGA ATTCGATCGCCGCGGCGCCC TTGTTTCCCAGACGA Swit_3506 3863009 - 3862818 - | Flp/Fap pilin component Swit_3507 3864808 - 3863087 - | membrane-like protein Swit_3508 3865044 - 3864805 - | hypothetical protein Swit_3509 3865736 - 3865041 - | tetratricopeptide TPR_4 Swit_3510 3866626 - 3865733 - | type II secretion system protein Swit_3511 3867534 - 3866626 - | type II secretion system protein Swit_3512 3868877 - 3867528 - | type II secretion system protein E Swit_3513 3870037 - 3868874 - | response regulator receiver protein Swit_3514 3871332 - 3870037 - | type II and III secretion system protein Swit_3515 3872210 - 3871329 - | Flp pilus assembly protein CpaB-like protein TERM 1959 3873147 - 3873199 + G 74 -11.7 -3.78775 | overlap 3873148 ATCGTCGACCGCGGC GGCCCGGCGGCCTTGCCGGTGCGGT CCG ACCGCGTCGGCGCGATCGCCCGCCA TTTCCTGCTCGGCCG TERM 1960 3873148 - 3873198 + G 72 -15.2 -2.87051 | overlap 3873147 TCGTCGACCGCGGCG GCCCGGCGGCCTTGCCGGTGCGGT CCG ACCGCGTCGGCGCGATCGCCCGCC ATTTCCTGCTCGGCC Swit_3516 3872706 - 3873857 + | hypothetical protein TERM 1961 3873905 - 3873877 - f 73 -3 -4.77165 | opp_overlap 3873890, overlap 3873878 CGGCCCACAAGAAAA TCGGATGGGCTA TCGCC TTACCCACCCGG CGGTGCTTTAATCGC TERM 1962 3873890 - 3873941 + F 74 -10 -3.75024 | gap 1, opp_overlap 3873878 3873877 AATCGGATGGGCTAT CG-CCTTACCCACCCGGCGGTGC TTTAATC GCCCCGGCAGGTGGGCAGGGACG TTCTTCATGATGCAG Swit_3517 3873948 - 3874229 + | AsnC family transcriptional regulator Swit_3518 3875167 - 3874202 - | LysR family transcriptional regulator TERM 1963 3876115 - 3876092 - g 73 -7.4 -4.11216 | gap 1, opp_overlap 3876095, overlap 3876094 CTGCGACCTCGAAAA GA-CGCTCGAC GGC GTCGCGCGCTC GACCTTCCTCAACTG TERM 1964 3876592 - 3876557 - g 70 -12.5 -3.35996 | GATCTGGACCGAGAA TCTGTCGCGCGGGCA TCGCGT CGCCCGCGCGATGGA AACCGGCATCGCCTG Swit_3519 3875250 - 3876740 + | aldehyde dehydrogenase Swit_3520 3876737 - 3877528 + | 4-oxalocrotonate decarboxylase Swit_3521 3877525 - 3878298 + | 4-oxalocrotonate decarboxylase TERM 1965 3878313 - 3878369 + G 73 -12.1 -3.40907 | gap 1, overlap 3878299 3878298 AGCGGGCCGGGGCTG GTCGCCGGCGCCGCGCAGCCGCGCGG CCGCTT CC-CGCATTTCCGCCGCGCGGGCGAC TTCGTGTTCCTGTCG Swit_3522 3878295 - 3878726 + | endoribonuclease L-PSP Swit_3523 3878723 - 3879274 + | 3-hydroxyanthranilate 3,4-dioxygenase Swit_3524 3879274 - 3880302 + | aminocarboxymuconate-semialdehyde decarboxylase Swit_3525 3880335 - 3881060 + | hypothetical protein Swit_3526 3882801 - 3881041 - | monooxygenase, FAD-binding Swit_3527 3885073 - 3882968 - | (p)ppGpp synthetase I, SpoT/RelA TERM 1966 3885147 - 3885126 - R 71 -9.5 -3.76413 | TGGCAAAAGCGGAAA TTTGTGGCC GTTC AGCCACAAA ATGGGACCTAAATGC TERM 1967 3885209 - 3885171 - R 100 -22.4 -2.96984 | overlap 3885176 TAAATGCATCAGATA CGGAACGACCCGCCGGCC GGG GGCTGGCGGGTCGTCACG AAAGGTCCGTCGCTA TERM 1968 3885204 - 3885176 - R 100 -21.7 -3.16971 | overlap 3885171 GCATCAGATACGGAA CGACCCGCCGGCC GGG GGCTGGCGGGTCG TCACGAAAGGTCCGT Swit_3528 3885580 - 3885239 - | DNA-directed RNA polymerase subunit omega Swit_3529 3886302 - 3885679 - | methyltransferase type 12 TERM 1969 3886481 - 3886460 - H 100 -13.7 -5.75342 | GGCGGGCAAAAAAAA GGCCGATCC CGAA GGACCGGCC GTAAAGTTTTTAGGA Swit_3530 3886692 - 3887567 + | LysR family transcriptional regulator TERM 1970 3887651 - 3887673 + T 78 -14.9 -3.05384 | opp_overlap 3887646 3887655, overlap 3887655 AGGCGCAGAACTCCA CCAAGGGGC GTCGA GCCCCTTGG TTCCGTCACCCACCC TERM 1971 3887725 - 3887757 + T 86 -11.9 -4.13014 | opp_overlap 3887725 3887731, overlap 3887731 GGGGGAGGTCGCAAA GAAAAAGGCGGGAGC ATC GCCCCCGCCTTTGCC TTTTCGCGATGTCCG TERM 1972 3887757 - 3887725 - T 91 -16.3 -3.55444 | opp_overlap 3887725 3887731, overlap 3887731 GGGGGAGGTCGCAAA GAAAAAGGCGGGAGC ATC GCCCCCGCCTTTGCC TTTTCGCGATGTCCG TERM 1973 3887751 - 3887731 - T 100 -16.1 -5.27335 | opp_overlap 3887731 3887725, overlap 3887725 GGTCGCAAAGAAAAA GGCGGGAGC ATC GCCCCCGCC TTTGCCTTTTCGCGA TERM 1974 3887731 - 3887751 + T 86 -13.9 -3.92659 | opp_overlap 3887725 3887731, overlap 3887725 GGTCGCAAAGAAAAA GGCGGGAGC ATC GCCCCCGCC TTTGCCTTTTCGCGA Swit_3531 3888246 - 3887779 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1975 3889565 - 3889604 + G 72 -13.7 -3.12327 | overlap 3889563 CTTCACCGCCATGTC GAGCGC-GCCGCTCTCG CACCGGAC CGAG-GCGGCGGCGCTC TATTCGCTGTCGCGC Swit_3532 3888447 - 3889949 + | EmrB/QacA family drug resistance transporter TERM 1976 3889950 - 3889966 + F 86 -15.1 -3.60971 | GCGCTGGCCGATTAG CGGCCGG ATT CCGGCCG TTTCCGCATTGCCGT Swit_3533 3890035 - 3891450 + | magnesium transporter Swit_3534 3891473 - 3891889 + | hypothetical protein Swit_3535 3894700 - 3891896 - | tetratricopeptide TPR_4 Swit_3536 3895498 - 3894794 - | hypothetical protein TERM 1977 3895560 - 3895534 - R 83 -14.5 -3.5121 | gap 1, overlap 3895514 3895532 ATTATCACAATAATA CGGCTTCGCGGC GCTC GCCGC-AAGCCG GTCGCGACGAACCGA TERM 1978 3895672 - 3895649 - R 100 -16 -5.28942 | opp_overlap 3895649 GACTCGAAAGAAAAA GGGGCGATCC CGAA GGACCGCCCC TTTCCGCCTCTTCCG TERM 1979 3895649 - 3895672 + r 81 -13.8 -3.6106 | opp_overlap 3895649 GACTCGAAAGAAAAA GGGGCGATCC CGAA GGACCGCCCC TTTCCGCCTCTTCCG Swit_3537 3896218 - 3895700 - | CarD family transcriptional regulator TERM 1980 3896408 - 3896377 - R 85 -10.2 -4.27584 | gap 2, opp_overlap 3896377 3896399 ATCGGTAAGCGAAAA GCCAGCATCCCGGC CTTTTC GCCGGG--GCTGGC CCCGTTTTTCAGGCT TERM 1981 3896399 - 3896412 + r 91 -9.5 -4.62904 | opp_overlap 3896377 TCCCGGCCTTTTCGC CGGGG CTGG CCCCG TTTTTCAGGCTATTT Swit_3538 3896784 - 3896446 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1982 3896844 - 3896865 + r 72 -12.3 -3.28712 | gap 1, opp_overlap 3896834 3896837 3896836, overlap 3896861 ATCAACACCGCGATA CCCCG-TCCG GAC CGGATCGGGG TTCTGGCGAACGGGC Swit_3539 3897167 - 3896886 - | RNA-binding S4 domain-containing protein Swit_3540 3899751 - 3897154 - | helicase domain-containing protein TERM 1983 3899470 - 3899492 + g 70 -12.7 -3.3164 | gap 1 ATCACCTTGTTTGTC GCCACCGGCC AACA GGCCGG-GGC TTATCGGCATCGATT TERM 1984 3900840 - 3900799 - g 74 -13.8 -3.30124 | gap 2, opp_overlap 3900839 GGCGATCTCGCAGAA GCTGTCGATGCGCAGCATCG GCTC CGACGC-GCGCTTCGAC-GC GATCATCGAGCATGC Swit_3541 3899969 - 3901552 + | peptidase M23B TERM 1985 3901572 - 3901599 + F 77 -2.6 -5.07486 | overlap 3901573 3901575 3901577 CCTGACTTTACCGAT CGTCATCCTGAC GAAA GTCAGGATCTCC TTTTTCTTCAAGATG Swit_3542 3901764 - 3903395 + | protein of unknown function DUF853, NPT hydrolase putative Swit_3543 3903392 - 3904381 + | hypothetical protein Swit_3544 3904388 - 3905131 + | methyltransferase type 11 Swit_3545 3906779 - 3905145 - | hypothetical protein Swit_3546 3907614 - 3906853 - | hypothetical protein TERM 1986 3907222 - 3907190 - G 73 -12.6 -3.53091 | gap 1, opp_overlap 3907178, overlap 3907191 AGCCCCTGCTCGAAA TGCCGGTCGGCGGCG GGGT CGCCGCCG-CTGGCG GGGGAGAGCTGGAGA TERM 1987 3907221 - 3907191 - G 74 -16.1 -2.71712 | gap 1, opp_overlap 3907178, overlap 3907190 GCCCCTGCTCGAAAT GCCGGTCGGCGGCG GGGT CGCCGCCG-CTGGC GGGGGAGAGCTGGAG Swit_3547 3908525 - 3907611 - | hypothetical protein Swit_3548 3908658 - 3909320 + | ICC-like protein putative phosphoesterase Swit_3549 3909385 - 3910611 + | diguanylate cyclase Swit_3550 3911333 - 3910596 - | peptide methionine sulfoxide reductase TERM 1988 3911320 - 3911343 + g 86 -2.4 -5.20154 | gap 1, overlap 3911324 ATCAGCGGCCGGTTA GGACTGTCCGT CAA AAGGGCA-TCC TTTTTTCCATTCTGT TERM 1989 3911422 - 3911448 + r 74 -10.1 -3.74693 | gap 1, overlap 3911428 TTGCGGGCCTCAGGC GCCGGCGCGGGC ATCC GCCCGC-TTGGC TTTCCTCGCATAAGC TERM 1990 3911428 - 3911443 + r 72 -11.8 -3.30701 | overlap 3911422 GCCTCAGGCGCCGGC GCGGGC ATCC GCCCGC TTGGCTTTCCTCGCA Swit_3551 3912743 - 3911541 - | aminotransferase TERM 1991 3912897 - 3912855 - H 77 -12.8 -3.53811 | gap 3, overlap 3912856 CGGAGGGCCCCGAAA GCC-GATCAGCCGCGC-GCCG TCGC CGGCCGGGCGGC-GATCAGGC CGCGCAGCGAATTGC Swit_3552 3912915 - 3914366 + | beta-lactamase domain-containing protein TERM 1992 3914407 - 3914424 + T 77 -14.1 -3.30701 | overlap 3914400 CCTCAAGCGCCGGGC GCCGGGC ATCC GCCCGGC TTGGCTTTCCTCGCA Swit_3553 3915087 - 3914647 - | hypothetical protein TERM 1993 3915176 - 3915217 + H 80 -5.8 -4.7923 | gap 3, opp_overlap 3915157, overlap 3915183 ATAGGTCGCGCGCTC GCGGCG-A-GCCC-GCCCCCC TTG GGGGTCCCGGGCGTTCGTCGC TTTATTTGTTTAGCT TERM 1994 3915284 - 3915271 - g 82 -3.7 -5.0916 | overlap 3915273 TCCCCAAGAGAAAAA CCTCG CCCT CGCGG CGCAACATGCGTCGC rpmF 3915249 - 3915428 + | 50S ribosomal protein L32 TERM 1995 3915592 - 3915608 + G 71 -11.5 -3.53811 | opp_overlap 3915584 GACGAGACGGTGATT CGCGCCG AAA TGGCGCG TTTCCCGCAGCTCGC Swit_3555 3915454 - 3916500 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1996 3917196 - 3917174 - g 72 -13.4 -3.14564 | CCACGCCGTCACCAA CCTCGCCCAG GTG CTGCGCGAGG TGATGGGCGATGCCG Swit_3556 3916512 - 3917471 + | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 1997 3917528 - 3917579 + F 91 -16 -3.61371 | gap 1, overlap 3917489 GCTCAGGCGCCGCGC GGGCTT-TGCCAGGCGGCGATGG GTCAGGA TCATCGCCGCTTGGCATGAACCC TTTGGAATCGGCTTT Swit_3557 3917651 - 3917953 + | integration host factor, alpha subunit Swit_3558 3917966 - 3918376 + | MerR family transcriptional regulator Swit_3559 3919077 - 3918511 - | putative phosphohistidine phosphatase, SixA TERM 1998 3919165 - 3919113 - R 100 -23.4 -3.37522 | gap 1, overlap 3919115 ATGCGACGGAAGGAA GACCGCAGCGGCGCCCGATCGCGGC ATGG GCCGGGACCGGGCGCCGTT-CGGGC TCAGAAACGCCGGGT TERM 1999 3919163 - 3919115 - R 100 -24.6 -3.25652 | gap 1, overlap 3919113 GCGACGGAAGGAAGA CCGCAGCGGCGCCCGATCGCGGC ATGG GCCGGGACCGGGCGCCGTT-CGG GCTCAGAAACGCCGG Swit_3560 3921298 - 3919166 - | TonB-dependent siderophore receptor Swit_3561 3923457 - 3921316 - | TonB-dependent siderophore receptor Swit_3562 3923632 - 3923952 + | hypothetical protein Swit_3563 3923949 - 3925532 + | hypothetical protein Swit_3564 3925538 - 3925822 + | hypothetical protein Swit_3565 3928522 - 3925787 - | helicase c2 TERM 2000 3927537 - 3927590 + g 87 -17.3 -3.28712 | gap 1, opp_overlap 3927493, overlap 3927538 CCCACCATGTCGCCG TCGCGC-GTGTACATCGCCCAGCGCG TGA CGAGCTGGGCGAGGATCGCCGCGCGG TTCTGGAAACCGCCC TERM 2001 3927538 - 3927589 + g 79 -18.6 -2.57132 | gap 1, opp_overlap 3927493, overlap 3927537 CCACCATGTCGCCGT CGCGC-GTGTACATCGCCCAGCGCG TGA CGAGCTGGGCGAGGATCGCCGCGCG GTTCTGGAAACCGCC TERM 2002 3928097 - 3928048 - G 82 -17.7 -3.02144 | gap 1 GCAGGCGCGCGAACA GGCCGCGTTCGGGCCGG-GCCGGC GCG GCCAGCACCCGGCCGACCGCCGCC GACCAGGGCCAGCGC TERM 2003 3928606 - 3928580 - H 82 -10.8 -4.0896 | overlap 3928581 3928598 AAAGCCCGCCCAAAA TCCTCCCTATGC GAA GCATGGGGAGGG GGACCATCCGCAGGA TERM 2004 3928605 - 3928581 - H 78 -14.3 -3.04894 | overlap 3928580 3928598 AAGCCCGCCCAAAAT CCTCCCTATGC GAA GCATGGGGAGG GGGACCATCCGCAGG TERM 2005 3930296 - 3930275 - g 74 -15.9 -2.78463 | opp_overlap 3930276 AGGCGCTTTACGAGA CCCTGCTCG GCGC CGAGCAGGG CCCGCGCATGGGCAG lysK 3928621 - 3930372 + | lysyl-tRNA synthetase Swit_3567 3932493 - 3930628 - | hypothetical protein TERM 2006 3932530 - 3932498 - R 95 -20.6 -3.15708 | ACACAGTACATGCAA GCGGCCCCGGCATC GCGGG GATGCCGGGGCCGA CAGGCGTCGTCGCCT Swit_3568 3933021 - 3932545 - | hypothetical protein TERM 2007 3933173 - 3933160 - R 74 -9.5 -3.90906 | opp_overlap 3933159, overlap 3933158 AATGAAAGGAAAAGA GGCGG GCTT CCGCC GTTCGTCAGGCGGGG Swit_3569 3933832 - 3933179 - | TetR family transcriptional regulator TERM 2008 3933558 - 3933579 + g 78 -10.1 -4.15044 | gap 1, overlap 3933552 3933556 AGCACCGATTCGAGC GCGG-CGCGG CTT TCGCGGCCGC TTTCTTCCAGGCAGG TERM 2009 3933737 - 3933709 - G 72 -4.6 -4.4009 | gap 2, opp_overlap 3933709 3933713 3933714, overlap 3933711 3933730 CGCGATGGTAGAAAA GA-TCGCGCG-CCG CCT CGAACACGCGAGTC GCTGCGGTCTTCTTG Swit_3570 3935233 - 3933890 - | aminodeoxychorismate synthase, subunit I TERM 2010 3934113 - 3934100 - G 75 -5.2 -4.60487 | overlap 3934087 3934101 GACGATCCCGAAAAA CGGG CCGCGC CCCG AATCCTCGATCGCGT TERM 2011 3935135 - 3935105 - G 78 -18.2 -2.69468 | overlap 3935102 GATCGCGACATAGGA GGCCGCCGAGCGCG GAT CGCCCTCGGCGGCG CTGTCGAGGAAGGCG Swit_3571 3936243 - 3935230 - | hypothetical protein TERM 2012 3935470 - 3935436 - G 82 -17 -3.01712 | opp_overlap 3935430 CCGGCGTCGCGAACA GCCGGTCGGCGAGGCG CAG CGCCAGGGCGACCGGC TCGACCATCTGATGC Swit_3572 3937121 - 3936255 - | Hpr(Ser) kinase/phosphatase Swit_3573 3937402 - 3937121 - | hypothetical protein Swit_3574 3937871 - 3937425 - | hypothetical protein TERM 2013 3937914 - 3937937 + H 72 -4.4 -4.54047 | overlap 3937919 CAATCGCCGATCGAG GCGAGGCCGG AATG TCGGGCTGGC TTTTATGTCCGATAG Swit_3575 3937982 - 3939232 + | histidine kinase Swit_3576 3939302 - 3940000 + | phosphate uptake regulator, PhoU Swit_3577 3940000 - 3940698 + | two component transcriptional regulator Swit_3578 3940774 - 3941847 + | hypothetical protein TERM 2014 3941834 - 3941857 + T 90 -18.2 -3.01924 | CCGTGATCGATCGGT TCCAGCCGGC CTGA GCCGGCTGGA TCTTCGAACCCCATC Swit_3579 3942236 - 3941961 - | hypothetical protein Swit_3580 3942286 - 3944793 + | TonB-dependent receptor Swit_3581 3944817 - 3945299 + | hypothetical protein Swit_3582 3945328 - 3946623 + | peptidase M19, renal dipeptidase Swit_3583 3946626 - 3947798 + | FAD dependent oxidoreductase Swit_3584 3948148 - 3947816 - | hypothetical protein Swit_3585 3948849 - 3948148 - | Serine O-acetyltransferase TERM 2015 3948957 - 3948993 + r 100 -15.1 -4.56597 | overlap 3948928 3948952 3948958 3948959 TCCAGCTTGTCAGGT GGCCGGTTTCCTCCCCG AAA CAGGGAGGAAACCGGGA TTTTTCACACCGCCG TERM 2016 3948958 - 3948992 + r 93 -18.6 -3.33744 | overlap 3948928 3948952 3948957 3948959 CCAGCTTGTCAGGTG GCCGGTTTCCTCCCCG AAA CAGGGAGGAAACCGGG ATTTTTCACACCGCC TERM 2017 3948959 - 3948991 + r 100 -22.1 -2.60032 | overlap 3948928 3948952 3948958 3948957 CAGCTTGTCAGGTGG CCGGTTTCCTCCCCG AAA CAGGGAGGAAACCGG GATTTTTCACACCGC Swit_3586 3949594 - 3948998 - | alkylhydroperoxidase TERM 2018 3949609 - 3949574 - G 100 -18.3 -5.76949 | gap 1, opp_overlap 3949574 3949575, overlap 3949576 GACGGTCAAAAAAAA GAGGGCGCGGAGGCCG GCCAT CGTCCTCCGCGCCC-C GTTTGTCGCGCGCGT TERM 2019 3949574 - 3949610 + g 91 -15.7 -3.86015 | opp_overlap 3949574 3949576, overlap 3949575 GACGGTCAAAAAAAA GAGGGCGCGGAGGCCGG CCA TCGTCCTCCGCGCCCCG TTTGTCGCGCGCGTG TERM 2020 3949575 - 3949609 + g 82 -19.2 -2.91395 | opp_overlap 3949574 3949576, overlap 3949574 ACGGTCAAAAAAAAG AGGGCGCGGAGGCCGG CCA TCGTCCTCCGCGCCCC GTTTGTCGCGCGCGT TERM 2021 3949608 - 3949576 - G 100 -22 -4.52949 | opp_overlap 3949575 3949574, overlap 3949574 CGGTCAAAAAAAAGA GGGCGCGGAGGCCG GCCAT CGTCCTCCGCGCCC CGTTTGTCGCGCGCG Swit_3587 3950207 - 3949662 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Swit_3588 3950317 - 3951216 + | LysR family transcriptional regulator Swit_3589 3952018 - 3951275 - | metallophosphoesterase Swit_3590 3952732 - 3952031 - | hypothetical protein Swit_3591 3953255 - 3952725 - | ECF subfamily RNA polymerase sigma-24 factor Swit_3592 3953751 - 3953290 - | molybdopterin synthase subunit MoaE Swit_3593 3954005 - 3953748 - | molybdopterin synthase subunit MoaD TERM 2022 3953864 - 3953820 - G 85 -17.8 -3.14132 | gap 1 GTCGGGGGTCACGAA GCCGTCGCCGATCGCGGCGCG GACC CGCGCC-CGGTCGGCGAACGC CTCGGCATAGCCGCC Swit_3594 3954577 - 3954026 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Swit_3595 3954733 - 3956049 + | major facilitator transporter TERM 2023 3956205 - 3956234 + T 87 -18.6 -2.52543 | opp_overlap 3956181 CCCGATCATGCAGGA TGGCGGCGTGGC CGGGAA GCCGCGCCGCCA TCCGTTCCCGCCCGT Swit_3596 3956733 - 3956278 - | hypothetical protein TERM 2024 3956701 - 3956720 + g 72 -6.4 -4.26076 | gap 1 ACGCGTGCCGCCCGA GCGCGAACG GGT CGT-CGTGC TTTTGATGGCCATGG TERM 2025 3957396 - 3957386 - g 70 -8.2 -3.84406 | overlap 3957387 CTCCGACCATAACAA GCCC GAC GGGC TCTGCGTCGTCCGGC Swit_3597 3956853 - 3957995 + | DNA-directed DNA polymerase Swit_3598 3958030 - 3958692 + | DSBA oxidoreductase Swit_3599 3959703 - 3958699 - | 2-nitropropane dioxygenase, NPD Swit_3600 3960491 - 3959700 - | enoyl-CoA hydratase/isomerase Swit_3601 3961249 - 3960488 - | short-chain dehydrogenase/reductase SDR Swit_3602 3962471 - 3961287 - | acetyl-CoA acetyltransferase Swit_3603 3963614 - 3962487 - | acyl-CoA dehydrogenase domain-containing protein Swit_3604 3963683 - 3964306 + | TetR family transcriptional regulator Swit_3605 3965433 - 3964435 - | phosphate transporter Swit_3606 3966608 - 3965436 - | hypothetical protein TERM 2026 3966057 - 3966039 - G 71 -11.7 -3.62522 | GAACTGCTCGAAGAA GCTGCCC TGCTT GGGCAGC AATGCCTGGAACCAG TERM 2027 3966400 - 3966424 + g 72 -8.4 -4.09739 | overlap 3966422 CCCGCTTCCTCATAG GCCTCGTGGC TCGCC GCCTCGTGGC TTTTCAGGCCCTTGA Swit_3607 3966657 - 3967229 + | hypothetical protein TERM 2028 3967347 - 3967386 + F 78 -15.7 -2.72043 | overlap 3967342 3967352 3967385 CAATTTCCACCGCGT GGGACGCACCCTCGGGT TCCCTT GCCCGGGGGTGCTTTCC GTTTCCCACCGGCTT TERM 2029 3967352 - 3967381 + F 89 -15 -3.84451 | overlap 3967342 3967347 TCCACCGCGTGGGAC GCACCCTCGGGT TCCCTT GCCCGGGGGTGC TTTCCGTTTCCCACC Swit_3608 3967547 - 3968302 + | HAD family hydrolase TERM 2030 3968805 - 3968841 + G 74 -10.9 -3.71848 | gap 1, overlap 3968795 GGTCGGCTGGCTCGA GAGCGAGCGGCTGTTC CGGGTC GAACGGCCGCTC-CAC TTCTTCCTCGGCCCC Swit_3609 3968299 - 3970095 + | glycoside hydrolase 15-related Swit_3610 3970092 - 3971483 + | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) Swit_3611 3971738 - 3972058 + | small multidrug resistance protein Swit_3612 3973579 - 3972071 - | Mg chelatase, subunit ChlI TERM 2031 3973565 - 3973553 - G 70 -9.1 -3.87815 | CTCCAGCCCGAGAAA CGCGA CCG TCGCG ACATGCGATACCATC Swit_3613 3974150 - 3973650 - | hypothetical protein TERM 2032 3973974 - 3974019 + g 74 -13.3 -3.31144 | gap 1 CCGCCCCATGTCGCC GTCGATCATGCTGTAGCCGCTG CCG CCG-GGCTTCAGCGTGATCGCC TTGTGCGCGTCGGCG TERM 2033 3974333 - 3974357 + H 93 -7.7 -5.14698 | overlap 3974331 3974334 CGCGCTCCCGATATG TGGCTGCCGCA TTG TTCGGCGGCCC TTTTGTTTTGGATTT TERM 2034 3974334 - 3974356 + H 73 -11.2 -3.66379 | overlap 3974331 3974333 GCGCTCCCGATATGT GGCTGCCGCA TTG TTCGGCGGCC CTTTTGTTTTGGATT Swit_3614 3974385 - 3974519 + | 50S ribosomal protein L34P TERM 2035 3974529 - 3974556 + F 73 -6.8 -4.36914 | overlap 3974530 GCCTGACCGGGACTC CCTACGCGGTGC TCCA GCGCCGCGCGGA TTTTCTCGCGGCCAA Swit_3615 3974537 - 3974857 + | ribonuclease P protein component Swit_3616 3974854 - 3975066 + | hypothetical protein TERM 2036 3975265 - 3975219 - g 72 -13.6 -3.14132 | GCCGCCGGTGACGAA GATCGAGGGCGGCCAGGAGAAG GTT CTTCCCCAGCCCGGCGCCGATC CGGCGGCCGCCGGCC TERM 2037 3975985 - 3976029 + G 83 -15.7 -3.61398 | gap 1 GTCGAGAGCGGCCGC GCGCTG-GTGATCGCGCCGG GCCAGG CCGGCTCGGTCTCGCAGCGC TTCTTCGCGGGCGCC Swit_3617 3975106 - 3976839 + | putative inner membrane protein translocase component YidC TERM 2038 3976880 - 3976836 - g 70 -3.4 -4.40561 | gap 1, opp_overlap 3976861 3976865 3976867, overlap 3976840 CGTCGCGAAAAAGAA GTGAGCGAGCCCGACGA-CTT CGAG ACGCTGGTCGAGCCCGCGCGC AAGCTGTTCGCGGGC Swit_3618 3976836 - 3977498 + | GTPase EngB Swit_3619 3977574 - 3978248 + | glutathione S-transferase domain-containing protein TERM 2039 3978365 - 3978331 - f 72 -12 -3.34344 | opp_overlap 3978342 3978353 3978353 3978355 CGATTTCCGAACCAA GCGGGACACGACCAGG CCT CCCGGTGGATTCCCGC CTTCGCGGGAATGAC Swit_3620 3978475 - 3979608 + | succinyl-diaminopimelate desuccinylase Swit_3621 3980411 - 3979605 - | regulatory protein, IclR Swit_3622 3981695 - 3980550 - | LuxR family transcriptional regulator Swit_3623 3982626 - 3981784 - | short chain dehydrogenase Swit_3624 3982914 - 3983363 + | hypothetical protein Swit_3625 3983360 - 3984541 + | lipid-transfer protein Swit_3626 3984543 - 3985607 + | 2-nitropropane dioxygenase, NPD Swit_3627 3985723 - 3986367 + | enoyl-CoA hydratase/isomerase Swit_3628 3986367 - 3987518 + | acyl-CoA dehydrogenase domain-containing protein Swit_3629 3987523 - 3988536 + | acyl-CoA dehydrogenase domain-containing protein Swit_3630 3988547 - 3989695 + | acetyl-CoA acetyltransferase Swit_3631 3989730 - 3990635 + | short-chain dehydrogenase/reductase SDR Swit_3632 3990642 - 3991706 + | acyl-CoA dehydrogenase domain-containing protein TERM 2040 3992877 - 3992835 - g 74 -16.9 -2.75074 | gap 1, overlap 3992832 TCCAGCGCAACATCA TCGCCGAGC-GCGCGCTCGG CCTG CCGCGCGAGCCGCGCGGCGA TATCGGATAGGAGAG Swit_3633 3991706 - 3992887 + | acyl-CoA dehydrogenase domain-containing protein Swit_3634 3992897 - 3993679 + | short chain dehydrogenase Swit_3635 3993676 - 3994152 + | dehydratase TERM 2041 3994565 - 3994531 - g 70 -8.5 -3.92963 | gap 1 GAACAAGCACAAGAA CGCCTATCGC-GCCCG CTCC CAGGCCGCGATCGCCG CGTCGCCGCACATGT Swit_3636 3994145 - 3995347 + | acetyl-CoA acetyltransferase TERM 2042 3995414 - 3995403 - g 76 -7.2 -4.2558 | overlap 3995404 GACGGTGGAGCAAAA GGCC GATC GGCC CGGGGAGGAATTCCG Swit_3637 3995386 - 3996603 + | major facilitator transporter Swit_3638 3996717 - 3997514 + | short-chain dehydrogenase/reductase SDR Swit_3639 3997531 - 3998310 + | short-chain dehydrogenase/reductase SDR Swit_3640 3999283 - 3998300 - | LysR family transcriptional regulator Swit_3641 3999431 - 4000549 + | hypothetical protein Swit_3642 4000554 - 4001738 + | hypothetical protein Swit_3643 4001735 - 4002634 + | beta-lactamase domain-containing protein Swit_3644 4002637 - 4003152 + | hypothetical protein Swit_3645 4003255 - 4004418 + | amidohydrolase 2 Swit_3646 4004538 - 4005770 + | major facilitator transporter Swit_3647 4005767 - 4006402 + | isochorismatase hydrolase Swit_3648 4006395 - 4008089 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_3649 4008086 - 4010251 + | 5-oxoprolinase (ATP-hydrolyzing) TERM 2043 4010424 - 4010403 - T 71 -13 -3.04263 | opp_overlap 4010394 4010392 4010391 ATTCGATCGGCAATA GCCGCTCC TTTTGG GGAGCGGC TTCCGGTGATCCTCA Swit_3650 4011636 - 4010437 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_3651 4011831 - 4012994 + | Acetyl-CoA acetyltransferase-like protein Swit_3652 4012991 - 4013401 + | hypothetical protein TERM 2044 4014529 - 4014511 - g 74 -13.8 -3.35679 | CCGCCGCACCTACAA GGCGGCGC TCG GCACCGCC TATGCCCCGCCCGGC Swit_3653 4013486 - 4015801 + | TonB-dependent receptor Swit_3654 4015885 - 4017165 + | amidohydrolase 2 Swit_3655 4017203 - 4017991 + | short-chain dehydrogenase/reductase SDR TERM 2045 4018807 - 4018832 + G 73 -10.3 -3.91897 | overlap 4018788 4018808 TTCGGCCTCGCGGCG GCGGCGGGCGG CTAT CTGCTCGCCGG TTTCTGCATGGACCG Swit_3656 4017988 - 4019226 + | major facilitator transporter Swit_3657 4019322 - 4020794 + | ATPase-like protein Swit_3658 4021460 - 4020801 - | glutathione S-transferase domain-containing protein Swit_3659 4022391 - 4021423 - | rhodanese domain-containing protein Swit_3660 4023052 - 4022441 - | resolvase domain-containing protein TERM 2046 4023068 - 4023114 + H 91 -15.4 -3.90112 | opp_overlap 4023068 4023081, overlap 4023066 4023070 GGTCCGGCGCTAATA TGTGGCACGGAAAGTGTCAA ATATTCG TTGACACATTCTGTGCCATA TTTCATTGGGGGACG TERM 2047 4023070 - 4023112 + H 86 -15.8 -3.54146 | opp_overlap 4023068 4023081, overlap 4023066 4023068 TCCGGCGCTAATATG TGGCACGGAAAGTGTCAA ATATTCG TTGACACATTCTGTGCCA TATTTCATTGGGGGA Swit_3661 4023145 - 4023618 + | hypothetical protein Swit_3662 4024680 - 4023625 - | hypothetical protein Swit_3663 4027260 - 4024867 - | DNA translocase FtsK TERM 2048 4027333 - 4027362 + H 90 -17.9 -2.92668 | overlap 4027330 TCATCCCCTTTTCCA CCGTCATCCCGGC CTCC GCCGGGATGACGA TATGGTTAGGTGGTG Swit_3664 4027364 - 4028632 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Swit_3665 4028851 - 4028666 - | hypothetical protein Swit_3666 4029462 - 4028848 - | peptidase S16, lon domain-containing protein TERM 2049 4029504 - 4029485 - R 71 -12.8 -3.05963 | ACCGTCAGGTGAACA GCAGCGCC GACA GGCGCCGC CGCTGCTCGCGCACC Swit_3667 4030370 - 4029474 - | thioredoxin domain-containing protein TERM 2050 4030649 - 4030664 + H 100 -11.8 -4.8622 | opp_overlap 4030641 4030639 4030638, overlap 4030659 GAAATCAGCGGATTA GCGGCC TTCG GGCCGC TTTTTCGTTGGAGAC TERM 2051 4031021 - 4031074 + H 83 -17.3 -2.52676 | CGCCTGACCGGCGCC GCGTCGGGGTCAAGCCCGGCCCG CACCAGAC CGAGTAGGGCCTGACCCCGCCGC TCGCTTGCGCCGGTC Swit_3668 4031126 - 4031482 + | hypothetical protein Swit_3669 4032155 - 4031886 - | hypothetical protein TERM 2052 4032345 - 4032331 - R 72 -7.8 -4.18161 | CACAAAGCGGGAAAA GGACGC TCG ACGTCC TGGTGGATCGCGAAC Swit_3670 4035775 - 4033220 - | hypothetical protein Swit_3671 4036836 - 4035844 - | ATPase central domain-containing protein TERM 2053 4036339 - 4036321 - G 74 -11 -3.76492 | CGCAATCTGATCAAA CAGCAAGC GCA GCTTGCCG GCCGTCTCCCCAAAG Swit_3672 4037684 - 4039831 + | nuclease TERM 2054 4039842 - 4039869 + T 100 -22 -3.51232 | opp_overlap 4039834, overlap 4039838 AATAGAACGGCATCG GGCCGGGGCCGC ATCG GCGGTCCCGGCC TTCCTTTCGCAGCCC TERM 2055 4039926 - 4039892 - T 100 -18.5 -4.58395 | opp_overlap 4039895, overlap 4039894 CGCAGCCCGCAAAAA TTCGCGGCCGCGCCC GGTTG GGGCGCGGCCGCTTA TCGTAGGGACAGGTC TERM 2056 4039924 - 4039894 - T 91 -21.1 -2.60508 | opp_overlap 4039895, overlap 4039892 CAGCCCGCAAAAATT CGCGGCCGCGCCC GGTTG GGGCGCGGCCGCT TATCGTAGGGACAGG TERM 2057 4039895 - 4039923 + T 100 -24.6 -3.40403 | opp_overlap 4039894 4039892 AGCCCGCAAAAATTC GCGGCCGCGCCC GGTTG GGGCGCGGCCGC TTATCGTAGGGACAG Swit_3673 4040647 - 4039940 - | hypothetical protein Swit_3674 4041118 - 4040753 - | hypothetical protein TERM 2058 4041613 - 4041639 + H 100 -4.3 -5.40072 | gap 1 CTGGCCGAAGCCCAC CCGTCTTCCCGC AACG GCGGCGGG-CGG TTTTTTTCGCCGCCG TERM 2059 4041651 - 4041665 + H 77 -12.8 -3.64703 | GCGGTTTTTTTCGCC GCCGGC CAT GCCGGC TTTGCATCGCGAAAC TERM 2060 4041702 - 4041688 - H 84 -2.7 -5.37593 | overlap 4041689 CGCGAAACCAAAAAA GCCGC CCGCC GCCGC CAGCCACTTCGTTCC Swit_3675 4041810 - 4042112 + | hypothetical protein TERM 2061 4042118 - 4042150 + F 86 -8.9 -4.59773 | opp_overlap 4042137, overlap 4042119 4042121 CGCAAGCTGACCGGC TCCGCGCTCCGCCCG AAA TGGGCGGGGCGCTCC TTTTTCCCGCTCCCG TERM 2062 4042119 - 4042149 + F 72 -12.4 -3.35542 | opp_overlap 4042137, overlap 4042118 4042121 GCAAGCTGACCGGCT CCGCGCTCCGCCCG AAA TGGGCGGGGCGCTC CTTTTTCCCGCTCCC TERM 2063 4042121 - 4042147 + F 93 -19.4 -3.24422 | opp_overlap 4042137, overlap 4042119 4042118 AAGCTGACCGGCTCC GCGCTCCGCCCG AAA TGGGCGGGGCGC TCCTTTTTCCCGCTC Swit_3676 4042180 - 4042578 + | hypothetical protein TERM 2064 4042596 - 4042624 + F 80 -5.9 -4.67982 | overlap 4042597 4042606 TAGCCGTTACCGGCC TGACGGCCGCG CCGGTAT CCCGGCTGTCG TTTTCTTGAGTGGGA Swit_3677 4042830 - 4043195 + | hypothetical protein TERM 2065 4043346 - 4043290 - f 74 -10.6 -3.72576 | gap 1 GCCGCGCTGACGAAA GGGGGCTGGGGC-GCCCCCTCTCGCCG CTCT CCCCATGAGGGGGCAGGGCCAGGCCCC GCCCCCTCAAACTCC Swit_3678 4043667 - 4044512 + | hypothetical protein TERM 2066 4044522 - 4044550 + F 100 -22.5 -3.76125 | GGTTAACCGCGATTG CCGCAGGGCTGGA CCA TCCGGCCCTGCGG TTTCCCTTCCCATCG TERM 2067 4044605 - 4044575 - f 100 -20.5 -4.08216 | CCATCGCTCGCAAAA CGCCGCCGATCCA TCCCC CGGATCGGCGGCG GCCGCGCGTCCCGAT TERM 2068 4044701 - 4044715 + F 79 -8.6 -4.2558 | opp_overlap 4044701 4044699 CCCATTCTCCAAAGA CGACTA TAA TAGTCG TTTTCGTAGCGAATG Swit_3679 4044758 - 4045009 + | hypothetical protein Swit_3680 4045149 - 4045412 + | hypothetical protein TERM 2069 4046318 - 4046298 - g 70 -12.5 -3.33696 | opp_overlap 4046295, overlap 4046283 CGGTGGCTCAAGGAA GCCGTCGAG CTC CGCGACGGC GGCTATCTCCGCCTG Swit_3681 4045572 - 4046348 + | hypothetical protein Swit_3682 4046469 - 4046735 + | hypothetical protein Swit_3683 4046742 - 4047635 + | plasmid replication initiator-like protein TERM 2070 4047784 - 4047770 - f 84 -8.6 -4.46212 | opp_overlap 4047770 GGTGCTAGTAGAAAA GAATCC TTC GGATTC TTGCTAACGGCGCGC Swit_3684 4047907 - 4048428 + | hypothetical protein Swit_3685 4048425 - 4049003 + | Type IV secretory pathway protease TraF-like protein Swit_3686 4048984 - 4049316 + | hypothetical protein Swit_3687 4049320 - 4050222 + | lytic transglycosylase, catalytic TERM 2071 4050361 - 4050377 + F 73 -10.9 -3.58037 | overlap 4050349 TGCGCCTCGGTTGTG GCCTTGA TTC TCAAGGC TTTCGGGCATTGCTG Swit_3688 4050401 - 4052212 + | Type IV secretory pathway VirD2 components (relaxase)-like protein TERM 2072 4052721 - 4052700 - g 74 -12.3 -3.65046 | gap 1 GCGCGAGCTGAAGAA CGCCGAGACC TAC GG-CTCGGCG CGCTGGGCGACGCGC Swit_3689 4052392 - 4054422 + | TRAG family protein Swit_3690 4054419 - 4054838 + | hypothetical protein TERM 2073 4054929 - 4054972 + F 100 -13 -5.20333 | gap 1 TGTCTCTCTTGATGT GCCCCTGACGCCGGGC-GGCG GTT CGCCTGGCCCTCATCAGGGGC TTTTTCTTGTCCATC Swit_3691 4054979 - 4055965 + | P-type conjugative transfer ATPase TrbB Swit_3692 4055962 - 4056297 + | conjugal transfer protein TrbC Swit_3693 4056294 - 4056575 + | type IV secretory pathway, VirB3 family protein Swit_3694 4056572 - 4059034 + | AAA ATPase Swit_3695 4059031 - 4059747 + | P-type conjugative transfer protein TrbJ TERM 2074 4059943 - 4059980 + G 71 -11.2 -3.61398 | gap 2 TCACCATGCCGGATA GCGGCTGC-G-AGGCGGC CTGG GCCGCCAACCGCCGCCGC TTCTTCCGCCAGGAC Swit_3696 4059756 - 4060058 + | hypothetical protein Swit_3697 4060055 - 4061440 + | P-type conjugative transfer protein TrbL Swit_3698 4061447 - 4062130 + | conjugal transfer protein Swit_3699 4062127 - 4063143 + | P-type conjugative transfer protein TrbG Swit_3700 4063140 - 4064357 + | conjugation TrbI family protein Swit_3701 4064354 - 4064575 + | hypothetical protein Swit_3702 4064901 - 4064593 - | hypothetical protein Swit_3703 4065845 - 4064898 - | LysR family transcriptional regulator TERM 2075 4064987 - 4065003 + g 70 -3.5 -4.51174 | opp_overlap 4064988, overlap 4064988 TGACGAACTCAAGAA ACCGGCG CAG CACCGGA TTTTCATTGTCCTCG TERM 2076 4065002 - 4064988 - G 78 -9.2 -4.26351 | opp_overlap 4064988 4064987 GACGAACTCAAGAAA CCGGCG CAG CACCGG ATTTTCATTGTCCTC Swit_3704 4066170 - 4066778 + | TetR family transcriptional regulator TERM 2077 4067572 - 4067540 - g 74 -13.3 -3.34962 | GCCTATATCGGAGAA CCGGATCTGGGGCGC ATC GCGCCCGGGATGCGG GTTCGCGTCCATAGC TERM 2078 4067669 - 4067658 - g 71 -2.2 -4.62336 | overlap 4067660 AGTTCACGCCAAAAA CGGT AGAG ACCA CGGATCTGCGCACGG Swit_3705 4066775 - 4067806 + | hypothetical protein TERM 2079 4068028 - 4068047 + G 73 -10 -3.86202 | gap 1, opp_overlap 4068025 TGGCGCCGAATAGCG GCCGCGCCA CGG TGGCG-GGC TTTGATGTGGTGGAC Swit_3706 4067808 - 4069592 + | ABC transporter related TERM 2080 4070689 - 4070707 + G 83 -8.8 -4.58297 | overlap 4070691 TGTGCCGAACCTGCT GGCGATGG CTG CCATCGGC TTTCTGTTTTTCGTC TERM 2081 4070742 - 4070732 - g 72 -8.2 -4.07568 | overlap 4070733 TTCGTCCTGGCAAAA CGCG CCA CGCG CAAGAATCTGGAGTG Swit_3707 4069625 - 4070758 + | ABC-2 type transporter Swit_3708 4070765 - 4071889 + | ABC-2 type transporter Swit_3709 4071886 - 4073343 + | RND efflux system outer membrane lipoprotein Swit_3710 4074623 - 4073388 - | outer membrane efflux protein Swit_3711 4074922 - 4074623 - | hypothetical protein Swit_3712 4077986 - 4074915 - | CzcA family heavy metal efflux protein TERM 2082 4075412 - 4075437 + g 75 -8.2 -4.11216 | overlap 4075413 TCGGGATCACCAGCA TCAGCCGCGC CGACGC GCGCTGCTGG TTTTCGAACTGGCCG Swit_3713 4078962 - 4077994 - | RND family efflux transporter MFP subunit Swit_3714 4080180 - 4079164 - | histidine kinase Swit_3715 4080875 - 4080177 - | two component transcriptional regulator Swit_3716 4081619 - 4080930 - | cytochrome B561 TERM 2083 4081071 - 4081100 + g 73 -7.1 -4.15044 | gap 1, opp_overlap 4081059 4081056, overlap 4081064 GATGCCCGGTGCCCG CGCGTCCTGCGCTC CGG GA-TGGAGGGCGCG TTTCTTGCGGCCGCC Swit_3717 4082392 - 4081691 - | hypothetical protein Swit_3718 4082497 - 4082949 + | hypothetical protein Swit_3720 4084521 - 4083256 - | TolC family type I secretion outer membrane protein TERM 2084 4083821 - 4083835 + g 73 -12.8 -3.53012 | GCTTCATCGAGCGAT CCCGGC ATG GCCGGG TTTGCCGGAAGGGGC Swit_3721 4084721 - 4084518 - | hypothetical protein Swit_3722 4086052 - 4084748 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Swit_3723 4086108 - 4086446 + | rhodanese domain-containing protein Swit_3724 4086474 - 4087547 + | RND family efflux transporter MFP subunit Swit_3725 4087544 - 4090762 + | acriflavin resistance protein Swit_3726 4090759 - 4091082 + | ArsR family transcriptional regulator Swit_3727 4091092 - 4091703 + | hypothetical protein TERM 2085 4092177 - 4092218 + G 91 -20.2 -3.28261 | gap 1 GCTGCGCACCAGCGC GGCGGCGTAGG-CGCGAGC GTGCG GCTCGCGGCCAACGTCGCC TTGATGTGCGGTTGT Swit_3728 4091700 - 4092464 + | hypothetical protein TERM 2086 4092617 - 4092597 - T 77 -3.9 -4.88407 | GTATCCAAGGAAAAA CTCTTCGCG CGT CTCGAATAG AAAATGTGCCCAACT Swit_3729 4093292 - 4092873 - | hypothetical protein Swit_3730 4093448 - 4094968 + | catalase TERM 2087 4095010 - 4094979 - T 75 -12.2 -3.6682 | gap 1, opp_overlap 4094980, overlap 4094980 CCTGATCCAGCGAAA GCCCTGGCCG-CTCG TAT CGTGGCGGCCAGGGT TTCATTTCATGCGAT TERM 2088 4095009 - 4094980 - T 78 -15.7 -2.79878 | gap 1, opp_overlap 4094980, overlap 4094979 CTGATCCAGCGAAAG CCCTGGCCG-CTCG TAT CGTGGCGGCCAGGG TTTCATTTCATGCGA TERM 2089 4094980 - 4095009 + T 100 -17.9 -4.10552 | gap 1, opp_overlap 4094980 4094979 CTGATCCAGCGAAAG CCCTGGCCGCT-CG TAT CGTGGCGGCCAGGG TTTCATTTCATGCGA Swit_3731 4095228 - 4095040 - | hypothetical protein Swit_3732 4095788 - 4095309 - | Ferritin, Dps family protein Swit_3733 4096597 - 4095809 - | redoxin domain-containing protein Swit_3734 4096719 - 4096609 - | cyd operon protein YbgT Swit_3735 4097882 - 4096734 - | cytochrome d ubiquinol oxidase, subunit II Swit_3736 4099481 - 4097895 - | cytochrome bd ubiquinol oxidase, subunit I TERM 2090 4099595 - 4099605 + G 78 -8.2 -4.36914 | CCAATTTGATCGACA GGGC GCG GCCC TTTTCTGGACCGCCG Swit_3737 4099572 - 4101152 + | cysteine ABC transporter permease/ATP-binding protein Swit_3738 4101149 - 4102783 + | ABC transporter related Swit_3739 4104516 - 4102768 - | chloride channel, core TERM 2091 4104628 - 4104640 + r 70 -10.5 -3.61517 | overlap 4104619 4104627 4104635 GCTCTTCCCGGTGTT GCCCG CAC CGGGC TTCTTGCGGCCCGCT TERM 2092 4104651 - 4104663 + r 76 -6.9 -4.46775 | overlap 4104635 4104627 CGGGCTTCTTGCGGC CCGCT TTG GGCGG TTTCTCTTTTGGATC Swit_3740 4105166 - 4104792 - | ArsR family transcriptional regulator Swit_3741 4105828 - 4105163 - | 1-Cys peroxiredoxin Swit_3742 4105935 - 4106378 + | thioredoxin Swit_3743 4106588 - 4107232 + | 1-Cys peroxiredoxin TERM 2093 4107233 - 4107289 + F 74 -13 -3.32844 | gap 1, opp_overlap 4107223 AAGAAGACACTCTGA GCCGGTCGGGCCGGCTTCGCGCG CCCCTCCCCCTT AGCGCGAAGCCGGCAC-ACCCGC TTATCGAATGAAAGG Swit_3744 4107313 - 4108233 + | beta-lactamase domain-containing protein TERM 2094 4108304 - 4108351 + G 75 -16.1 -2.94416 | overlap 4108306 GTCGGCTTCACGCTC GGCCTCGTGGGGGGCGGCGGG TCGATC CTCGCCGTCCCCCTCATGGTC TATCTCGTCGGCGTC TERM 2095 4108306 - 4108349 + G 74 -15.1 -3.02471 | overlap 4108304 CGGCTTCACGCTCGG CCTCGTGGGGGGCGGCGGG TCGATC CTCGCCGTCCCCCTCATGG TCTATCTCGTCGGCG Swit_3745 4108238 - 4109026 + | hypothetical protein Swit_3746 4109056 - 4109916 + | methyltransferase type 11 TERM 2096 4109973 - 4109959 - g 75 -5.6 -4.63044 | overlap 4109961 ATGGATAGAAAGAAA CTGTCG CTG CGACTG AAAGCGGGCGACGCG Swit_3747 4109944 - 4110192 + | hypothetical protein Swit_3748 4110452 - 4110186 - | TonB family protein TERM 2097 4110267 - 4110215 - G 85 -19.3 -3.04263 | gap 1, overlap 4110218 4110256 4110259 AGGGGATCGTGAAGA CGA-GCTGGTCCCCTTCCACCGTC GCGGGA GGCGGTGGAAAGGGACCAGCATTG CGGACCGTCCGGAGC TERM 2098 4110263 - 4110218 - G 95 -25.6 -2.74523 | overlap 4110215 4110256 4110259 GGATCGTGAAGACGA GCTGGTCCCCTTCCACCGTC GCGGGA GGCGGTGGAAAGGGACCAGC ATTGCGGACCGTCCG TERM 2099 4110828 - 4110884 + G 72 -5.6 -4.4078 | gap 1, opp_overlap 4110829 4110840, overlap 4110829 4110831 CAGACCCGCGCCCAA ACGCTGCGACA-AGGCGGGGGACAGGC CATC GCCTGTCCCCCGCCCCTGCATCAAGGA TTTTCGTTCCGAACG TERM 2100 4110880 - 4110829 - g 85 -16.7 -3.53563 | gap 2, opp_overlap 4110828 4110829 4110831, overlap 4110840 AGACCCGCGCCCAAA CGCTGCGACAAGGCGGGGGACAGGC CATC GCCTGTCCCCCGCCCC-T-GCATCA AGGATTTTCGTTCCG TERM 2101 4110871 - 4110840 - g 100 -27.4 -3.30635 | opp_overlap 4110831 4110829 4110828, overlap 4110829 CAAACGCTGCGACAA GGCGGGGGACAGGC CATC GCCTGTCCCCCGCC CCTGCATCAAGGATT Swit_3749 4110463 - 4110924 + | hypothetical protein Swit_3750 4113133 - 4110908 - | TonB-dependent receptor Swit_3751 4113498 - 4113199 - | hypothetical protein TERM 2102 4113355 - 4113379 + g 89 -7.7 -4.91109 | opp_overlap 4113361 4113362 GGGCGAGGACAGTCC GGAGAAGGCGC AGG GCGCTTCCGCC TTTTTGTGCTCCCCA Swit_3752 4115011 - 4113743 - | phage integrase family protein TERM 2103 4115327 - 4115345 + r 81 -11.7 -3.86015 | GCGTTGTTGCGCCAT CGACGCC TGAGC GGCGTCG TTTATCCGGAACCTG Swit_3753 4116914 - 4115406 - | aldehyde dehydrogenase Swit_3754 4118399 - 4116942 - | amino acid permease-associated region Swit_3755 4118603 - 4119016 + | ketosteroid isomerase-like protein Swit_3756 4119020 - 4119499 + | hypothetical protein TERM 2104 4120089 - 4120140 + G 77 -15.1 -3.15861 | gap 1 CGAGGAGGCGATCTG GCCGGTGCAGGTATCGGGCGAGCG GCTGG TGCT-GCCCGATGCCGGCTCCCGC TTGCTCGAGATCATC Swit_3757 4119508 - 4120473 + | LysR family transcriptional regulator Swit_3758 4120633 - 4122936 + | TonB-dependent receptor Swit_3759 4122961 - 4124550 + | amidohydrolase 3 TERM 2105 4125484 - 4125503 + G 74 -16.4 -2.81725 | opp_overlap 4125483 4125479, overlap 4125480 CAGCGAGGAAGCGAT GCGCGCGC TTCG GCGCGCGC TGGTTCCTATCAGCT Swit_3760 4124540 - 4125520 + | cobalamin synthesis protein, P47K Swit_3761 4126929 - 4125634 - | FAD dependent oxidoreductase Swit_3762 4127385 - 4126963 - | endoribonuclease L-PSP Swit_3763 4128577 - 4127426 - | ornithine cyclodeaminase TERM 2106 4128599 - 4128616 + r 76 -9.1 -3.99315 | gap 1, overlap 4128596 GTTCCAGTTTCGGGG CCGCGCCG TCG CGGC-CGG TTGTTTCGCTGTAGT Swit_3764 4129761 - 4128682 - | hypothetical protein TERM 2107 4129219 - 4129265 + g 72 -14.4 -3.22475 | gap 2, opp_overlap 4129212, overlap 4129218 4129234 GGTGAAGACCGCCTT GC-CCGCG-TCGCTGCCGAGCG ACGGC CGCGCGGCGGCGATCCCGGCGC TCTTGTCGCCCTGGA Swit_3765 4131298 - 4129811 - | FAD linked oxidase domain-containing protein Swit_3766 4134239 - 4131477 - | TonB-dependent receptor TERM 2108 4134367 - 4134389 + r 71 -13.4 -2.66316 | overlap 4134364 4134385 4134388 TCGAAGGCGCCCTCC GGGAAGACGC GAT GCGTCCTCCC TCCTGTCGTCAGGCG Swit_3767 4136073 - 4134439 - | amidohydrolase 3 TERM 2109 4136222 - 4136246 + r 73 -12.7 -3.15544 | GGCCGGTCTATCCGG CCGCGCGCGGC ACG GCGGCGCGCCG TTCCTCCCAGTCGAG Swit_3768 4136669 - 4136214 - | hypothetical protein Swit_3769 4137568 - 4136666 - | NAD-dependent epimerase/dehydratase Swit_3770 4139122 - 4137605 - | AMP-dependent synthetase and ligase TERM 2110 4139051 - 4139086 + g 72 -13.3 -3.14931 | gap 2 GCCGCTCTCCATCTC CA-GCACGGCGG-GGCG GTCG CGCCACCGCCGGGCATG TTCCTCGAGCATCGC Swit_3771 4139275 - 4140432 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 2111 4140694 - 4140721 + G 83 -15.5 -3.63515 | overlap 4140695 CCCGGCCGAGCTGAT CGCGCGGGCGG AGGCCA CCGCCCGCGCC TTCTTCGCGCTGCCG TERM 2112 4140695 - 4140720 + G 81 -19 -2.77895 | overlap 4140694 CCGGCCGAGCTGATC GCGCGGGCGG AGGCCA CCGCCCGCGC CTTCTTCGCGCTGCC Swit_3772 4140446 - 4141492 + | 2OG-Fe(II) oxygenase TERM 2113 4141527 - 4141504 - f 72 -12.4 -3.37612 | opp_overlap 4141503 4141505, overlap 4141505 CTGAACCCCAATTAA GCCCCTCCCT TGAA AGGGAGGGGG GCGGTTTGTGTTCGG TERM 2114 4141526 - 4141505 - f 77 -15.9 -2.62246 | opp_overlap 4141503 4141505, overlap 4141504 TGAACCCCAATTAAG CCCCTCCCT TGAA AGGGAGGGG GGCGGTTTGTGTTCG TERM 2115 4141722 - 4141683 - g 72 -9 -4.05004 | opp_overlap 4141681 CGACGAGAAGAAGAA GGACGATGCCGCCGCCGC CACC GCGCCGGTGCCGCCGCCC AATGTCTCGGTGACG Swit_3773 4141603 - 4143117 + | peptidase S10, serine carboxypeptidase TERM 2116 4143124 - 4143149 + T 100 -16.9 -4.09739 | opp_overlap 4143141, overlap 4143125 GAACGCTGACCTATT TCCCCCTCCCT TGAA AGGGAGGGGGG TTTTCGCGAAGTTAC TERM 2117 4143125 - 4143148 + T 90 -18.2 -3.05522 | opp_overlap 4143141, overlap 4143124 AACGCTGACCTATTT CCCCCTCCCT TGAA AGGGAGGGGG GTTTTCGCGAAGTTA Swit_3774 4143613 - 4143161 - | 7-cyano-7-deazaguanine reductase Swit_3775 4143777 - 4144643 + | rhodanese domain-containing protein TERM 2118 4144740 - 4144711 - g 71 -10.7 -3.65046 | gap 1, opp_overlap 4144735 GCGCCACGCGAAGAA CCG-CCGGGGGATC GTC AATCCCCCGGTCTG GCGCGCGTCGACCAT Swit_3776 4144640 - 4145836 + | cystathionine beta-lyase TERM 2119 4145855 - 4145882 + T 91 -9.1 -4.56597 | gap 1, overlap 4145858 CCGCCAGCGGGGCAG CGTCGGTCCGGG AAGCG CCCGG-CCGGTG TTTTTCAGGCGGCGC Swit_3777 4146267 - 4145887 - | hypothetical protein TERM 2120 4146002 - 4145957 - G 100 -15.9 -5.03145 | GAATTGCCTAAAAAA CGGGCGGCGGCGATCGTGCCG GCAT CGGCCCGGCCGCCACGGGCCG CCATGAGCGAGAGGC Swit_3778 4146577 - 4147326 + | hypothetical protein TERM 2121 4147352 - 4147375 + T 100 -21 -4.27316 | TGGGGGAGGCAGGGA GGGGCCGCGG TTCG CCGCGGCCCC TTTTCCGTTCAGCGG Swit_3779 4148934 - 4147384 - | ABC transporter related Swit_3780 4149713 - 4148931 - | binding-protein-dependent transport systems inner membrane component Swit_3781 4150638 - 4149718 - | binding-protein-dependent transport systems inner membrane component TERM 2122 4150727 - 4150696 - R 78 -10 -4.08692 | GAAGGCCTCCCAAAA CGCGTCATCCCGGC GGAG GCCGGGATCTCGGG AGATGAAGCGCGGAG TERM 2123 4150774 - 4150757 - R 76 -12.7 -3.53012 | GCCTCCCTCCTGAAA TCCCGGC CTCC GCCGGGA TGACGATAAGCCTTG Swit_3782 4151225 - 4150794 - | hypothetical protein Swit_3783 4151733 - 4151215 - | lipoprotein signal peptidase TERM 2124 4151427 - 4151455 + g 79 -10.9 -4.07885 | CTCCGCCCAGCACCA GGCCGAGCGCGAC CAC GTCGCCCTTCGCC TTTTCCCGCCAGATC ileS 4154587 - 4151726 - | isoleucyl-tRNA synthetase Swit_3785 4155591 - 4154650 - | FMN adenylyltransferase / riboflavin kinase Swit_3786 4156287 - 4155799 - | dihydrofolate reductase Swit_3787 4157210 - 4156284 - | thymidylate synthase TERM 2125 4157350 - 4157374 + H 100 -9.9 -4.83169 | opp_overlap 4157369, overlap 4157351 4157352 4157362 4157365 CCGTCACCCACCCCC AGCCCCTCCCT TGA AGGGAGGGGGA TTTTTCTGCCCCACT TERM 2126 4157351 - 4157373 + H 79 -13.4 -3.49419 | opp_overlap 4157369, overlap 4157350 4157352 4157362 4157365 CGTCACCCACCCCCA GCCCCTCCCT TGA AGGGAGGGGG ATTTTTCTGCCCCAC TERM 2127 4157352 - 4157372 + H 84 -16.9 -2.6933 | opp_overlap 4157369, overlap 4157351 4157350 4157362 4157365 GTCACCCACCCCCAG CCCCTCCCT TGA AGGGAGGGG GATTTTTCTGCCCCA Swit_3788 4157360 - 4158217 + | exodeoxyribonuclease III Xth Swit_3789 4158214 - 4159275 + | GTP cyclohydrolase II TERM 2128 4159661 - 4159631 - g 72 -14.6 -2.82623 | opp_overlap 4159628 4159631, overlap 4159628 GCTGGGCCACAACGA CGCGCCGCCGGTGC CGG GCATGGGCAGCGCG GTGTTCCTCCATTGC Swit_3790 4159272 - 4159778 + | hypothetical protein TERM 2129 4159811 - 4159789 - T 77 -13.4 -3.33261 | overlap 4159790 TGTGAAGTGCTATAA GCCCCTCCCT GCA AGGGAGGGGG AAGGGGTGGGTGGCG TERM 2130 4159810 - 4159790 - T 83 -16.9 -2.59742 | overlap 4159789 GTGAAGTGCTATAAG CCCCTCCCT GCA AGGGAGGGG GAAGGGGTGGGTGGC Swit_3791 4160392 - 4159943 - | MerR family transcriptional regulator Swit_3792 4162073 - 4160358 - | AMP-dependent synthetase and ligase Swit_3793 4163401 - 4162091 - | membrane protein involved in aromatic hydrocarbon degradation TERM 2131 4162138 - 4162167 + g 72 -15.7 -2.87564 | CGATCGCGTGGGCCC CGGTCAGCCGGCC GTCG GGCCGGATGATCG TCTGTGCCGGGGTGC Swit_3794 4163840 - 4163436 - | hypothetical protein TERM 2132 4164556 - 4164531 - g 86 -13.9 -3.83568 | CGAGAGCCAGAAGAA GGCCGGCGCCG CCCG CGAGGCCGGCC GGCTGAAGGACGAGA Swit_3795 4164007 - 4165143 + | acetyl-CoA acetyltransferase Swit_3796 4165146 - 4167452 + | 3-hydroxyacyl-CoA dehydrogenase TERM 2133 4167479 - 4167455 - f 74 -5.5 -4.4078 | overlap 4167457 4167458 GCTGCGGAACTAAAA TATCCTCCCCG GGA CGGGGAGGGGG ACCATGCGCAGCATG TERM 2134 4167477 - 4167457 - f 81 -12.5 -3.8125 | overlap 4167455 4167458 TGCGGAACTAAAATA TCCTCCCCG GGA CGGGGAGGG GGACCATGCGCAGCA TERM 2135 4167476 - 4167458 - f 83 -16 -2.88268 | overlap 4167457 4167455 GCGGAACTAAAATAT CCTCCCCG GGA CGGGGAGG GGGACCATGCGCAGC Swit_3797 4167594 - 4169384 + | acyl-CoA dehydrogenase domain-containing protein TERM 2136 4169410 - 4169434 + T 100 -14.9 -5.19212 | opp_overlap 4169410 CGGTCGAATGAAAAA GGGGCGGCTCC CGC GGGACCGCCCC TTTTTTCATGATCGT TERM 2137 4169434 - 4169410 - T 100 -14.9 -4.8622 | opp_overlap 4169410 CGGTCGAATGAAAAA GGGGCGGCTCC CGC GGGACCGCCCC TTTTTTCATGATCGT Swit_3798 4171232 - 4169451 - | DEAD/DEAH box helicase domain-containing protein TERM 2138 4171391 - 4171381 - H 72 -2.4 -4.67982 | opp_overlap 4171381 CGCGATGGAAGAAAA GCGG CGC CTGC TTCGTATCGACCTCC TERM 2139 4172208 - 4172265 + G 73 -16.1 -2.53894 | gap 1, overlap 4172229 GCGGCATCCTCGCCC GGCGTCACGGCCTGGCCGAGCGCGCGGC GCT GCTGC-CGCCCTGGCAGGCGGTGCTGCC CTTCCTGCTGGTCGT Swit_3799 4171565 - 4172716 + | hypothetical protein Swit_3800 4173846 - 4172671 - | hypothetical protein TERM 2140 4173886 - 4173863 - H 78 -12.4 -3.80733 | overlap 4173864 GGGACTCCAGAATAA GCCCCTCCCT TTCA AGGGAGGGGG AAGGGGTGGGTGCGA TERM 2141 4173885 - 4173864 - H 79 -15.9 -2.88118 | overlap 4173863 GGACTCCAGAATAAG CCCCTCCCT TTCA AGGGAGGGG GAAGGGGTGGGTGCG Swit_3801 4174066 - 4175649 + | peptide chain release factor 3 TERM 2142 4175710 - 4175675 - f 73 -8.1 -4.00042 | gap 1, opp_overlap 4175675 4175674, overlap 4175676 CGGCTGACGAAATAA TGCG-CCGCCGGGCTC GTATA GGGCCCGGAGGTCGCC CTTGTTCATCGCACA TERM 2143 4175741 - 4175786 + G 74 -13.2 -3.30338 | gap 2, opp_overlap 4175736 4175735 4175738 GCATCACAAGCAGGA CGGCGCGCCCGCCGCCGTGGCC GACC GGCCGCTGCGG-GT-CGCGCTG TTCTCGGGCAATTAT Swit_3802 4175712 - 4176896 + | glycosyl transferase, group 1 Swit_3803 4176946 - 4177932 + | ErfK/YbiS/YcfS/YnhG family protein Swit_3804 4177943 - 4178542 + | peptidase M23B Swit_3805 4178590 - 4179219 + | GDSL family lipase Swit_3806 4179290 - 4179625 + | anti-sigma-factor antagonist Swit_3807 4179630 - 4180601 + | beta-lactamase superfamily hydrolase Swit_3808 4180719 - 4181693 + | tRNA pseudouridine synthase B Swit_3809 4181690 - 4181959 + | SSU ribosomal protein S15P TERM 2144 4181968 - 4181998 + F 85 -14.7 -3.61398 | opp_overlap 4181961 4181964, overlap 4181969 4181973 CAAGTAAGCCAGCTT CTGAACGGCCCCG CAAAA CGGGGCCGTTCGC TTATTCCGCCAGGGG TERM 2145 4181969 - 4181997 + F 86 -18.2 -2.76696 | opp_overlap 4181961 4181964, overlap 4181968 4181973 AAGTAAGCCAGCTTC TGAACGGCCCCG CAAAA CGGGGCCGTTCG CTTATTCCGCCAGGG TERM 2146 4181973 - 4181993 + F 84 -15.4 -3.28745 | opp_overlap 4181964, overlap 4181969 4181968 AAGCCAGCTTCTGAA CGGCCCCG CAAAA CGGGGCCG TTCGCTTATTCCGCC TERM 2147 4182511 - 4182483 - g 74 -13.9 -3.34104 | CTACAACGAGATCAA CGTCATCGCCCAG GTG CTGAGCTATGACG GCGAGAACGAGCCCG Swit_3810 4182148 - 4184472 + | polynucleotide phosphorylase/polyadenylase TERM 2148 4184525 - 4184494 - f 88 -17.4 -3.07013 | opp_overlap 4184494 4184500, overlap 4184500 GACGTTTCGAAGACA GGAAAAGGGGAGCG GAAA CGCTCCCCTTTTTC TTTATGCTCGTTCGA TERM 2149 4184494 - 4184525 + F 100 -19.6 -4.02022 | opp_overlap 4184494 4184500, overlap 4184500 GACGTTTCGAAGACA GGAAAAGGGGAGCG GAAA CGCTCCCCTTTTTC TTTATGCTCGTTCGA TERM 2150 4184500 - 4184519 + F 100 -15 -5.40464 | opp_overlap 4184494 4184500, overlap 4184494 TCGAAGACAGGAAAA GGGGAGCG GAAA CGCTCCCC TTTTTCTTTATGCTC TERM 2151 4184519 - 4184500 - f 100 -15 -4.43213 | opp_overlap 4184500 4184494, overlap 4184494 TCGAAGACAGGAAAA GGGGAGCG GAAA CGCTCCCC TTTTTCTTTATGCTC Swit_3811 4184540 - 4185046 + | hypothetical protein TERM 2152 4185831 - 4185887 + G 76 -14.4 -3.53012 | gap 1 CTGTCCGCCGACGCG GCGGTGC-CGATCGCGCTGATCGTCGC CGAA GCGGTGGCCAATGCGATCGAGCACGGC TTTGCCGGGCGCGAG Swit_3812 4185111 - 4186115 + | signal transduction histidine kinase Swit_3813 4186497 - 4186132 - | hypothetical protein Swit_3814 4187145 - 4186546 - | thymidine kinase rbfA 4187616 - 4187218 - | ribosome-binding factor A TERM 2153 4187673 - 4187634 - R 74 -12 -3.53012 | opp_overlap 4187638, overlap 4187635 CGCGGCCTCTCTAAA GGGGCGCGACATCCCGGC CTCC GCCGGGATGTCGCCTGTC TCCTACAGCGTCCGC TERM 2154 4187638 - 4187669 + r 93 -20.2 -2.94218 | opp_overlap 4187635 4187634 GCCTCTCTAAAGGGG CGCGACATCCCGGC CTCC GCCGGGATGTCGCC TGTCTCCTACAGCGT infB 4190246 - 4187676 - | translation initiation factor IF-2 Swit_3817 4191008 - 4190268 - | hypothetical protein Swit_3818 4191225 - 4190995 - | 4-oxalocrotonate tautomerase nusA 4192821 - 4191232 - | transcription elongation factor NusA Swit_3820 4193389 - 4192829 - | hypothetical protein TERM 2155 4193830 - 4193858 + G 74 -12.3 -3.64703 | CGGATCGCTGGTCGT CGTCGCCGATCGG GCG CGGCTCGGCGGCG TTTCGCTGGCCGACG TERM 2156 4193892 - 4193918 + G 74 -13.6 -3.35597 | overlap 4193889 4193888 4193885 4193890 TGGTCATCCTGTCGG CTCCGCCGCTGT TGT GCGGCGGCGGCG TGTTTGGGGAGTAGC Swit_3821 4193627 - 4193932 + | hypothetical protein Swit_3822 4193939 - 4195468 + | methyl-accepting chemotaxis sensory transducer TERM 2157 4195527 - 4195556 + T 86 -7.7 -4.79949 | opp_overlap 4195525 4195544, overlap 4195528 4195544 TGCGCAGCAACCATG CCGTCATCCCGGC GAAA GCCGGGATCTCGC TTCTTTTTTTCGAAG TERM 2158 4195528 - 4195555 + T 71 -11.2 -3.46885 | opp_overlap 4195525 4195544, overlap 4195527 4195544 GCGCAGCAACCATGC CGTCATCCCGGC GAAA GCCGGGATCTCG CTTCTTTTTTTCGAA Swit_3823 4196864 - 4195650 - | 5-aminolevulinate synthase Swit_3824 4197785 - 4196991 - | glutamate racemase TERM 2159 4197488 - 4197445 - G 74 -16.6 -2.78384 | opp_overlap 4197449 4197453, overlap 4197411 TCGGTGCCGAGCACA CCGATCGCGCGCGCCGCCGA TCGT TCGGCGGCGGGCTTGATCGC GGGCACCGTGCCGAC TERM 2160 4197453 - 4197480 + g 86 -18.4 -3.14132 | opp_overlap 4197411 4197445, overlap 4197449 GAGCACACCGATCGC GCGCGCCGCCGA TCGT TCGGCGGCGGGC TTGATCGCGGGCACC Swit_3825 4197856 - 4199634 + | DNA protecting protein DprA TERM 2161 4201425 - 4201405 - g 72 -6.1 -4.2828 | gap 1, opp_overlap 4201424 GGTGATGGATCAAAA GCCGTCGG AGGTCA CCG-CGGC GCTCGACGAGTTCCT Swit_3826 4199699 - 4202257 + | DNA topoisomerase I Swit_3827 4203422 - 4202427 - | tryptophanyl-tRNA synthetase Swit_3828 4205050 - 4203473 - | integral membrane protein MviN TERM 2162 4205085 - 4205059 - R 75 -12.2 -3.65046 | overlap 4205060 GGCTCATGCCAATAA TCCTCCCGGTCC GCA GGACGGGGAGGG GGACCACCCGCAGGG TERM 2163 4205084 - 4205060 - R 78 -15.7 -2.78813 | overlap 4205059 GCTCATGCCAATAAT CCTCCCGGTCC GCA GGACGGGGAGG GGGACCACCCGCAGG TERM 2164 4205102 - 4205128 + r 71 -13.6 -2.52676 | GACCACCCGCAGGGT GGTGGAGGGGTC GGC GACCCCGCCTCC TGCCTTACGAAGATG Swit_3829 4205879 - 4205232 - | protein translocase subunit secB Swit_3830 4205921 - 4206601 + | import inner membrane translocase, subunit Tim44 Swit_3831 4206598 - 4207836 + | MltA domain-containing protein Swit_3832 4207814 - 4208386 + | Smr protein/MutS2 Swit_3833 4209024 - 4208383 - | cation efflux protein TERM 2165 4209139 - 4209111 - R 100 -18.2 -3.67976 | gap 1 CCGATCAACGGGAAA GGCCGTGCCG-CC TCCA GGTCGGCACGGCC TCCTCGGACCTGATG Swit_3834 4210059 - 4209223 - | hypothetical protein TERM 2166 4209708 - 4209745 + g 82 -14.1 -3.75024 | gap 1, overlap 4209700 CGAGTTGGGCATCGG CGCTGCCGCCGGC-CGAT CCG GTGGCGCCGGCGGTGGCG TTGTTGATCGTGCCG TERM 2167 4210087 - 4210125 + r 76 -7.3 -4.25104 | TCCGTTACGGGCGGC GTCCGGCGCCGCTCG AAAAGGCAA CGGGAGGCGTGGGAC TTTTCATCCCGGCCG Swit_3835 4211494 - 4210169 - | peptidase S8 and S53, subtilisin, kexin, sedolisin Swit_3836 4211566 - 4212057 + | ECF subfamily RNA polymerase sigma-24 factor Swit_3837 4212054 - 4212755 + | putative transmembrane anti-sigma factor TERM 2168 4212875 - 4212817 - f 81 -7.4 -4.4078 | gap 2, opp_overlap 4212824 TGGCGGCAAGGAAAA GGCGCGAG-GG-AGGCGCGACGTCCCTC TTGCG GAAGGATATCGCGCATGCCGCTCCAGCC GGCTCGCGCCGCCTC TERM 2169 4213078 - 4213102 + F 90 -15.9 -3.68261 | ATGGGCGGCTGACGG CATCTGTTCCT TGG AGGAACAGATG TTTCAAATATTATCC Swit_3838 4213125 - 4215284 + | malate synthase G TERM 2170 4215276 - 4215299 + T 73 -8.8 -4.08221 | gap 1, opp_overlap 4215267 CAAAAGGTGAAGGCG GCGGCCTGAGC GCC GCTC-GCCCGC TTTCCTTCTCTTCCG TERM 2171 4215388 - 4215330 - T 72 -13.4 -2.72144 | gap 3, opp_overlap 4215330 4215378, overlap 4215365 TCATTCCCGCGAAAG CGGGAATCCATGG--ACGGCGGCACCTTC GTCA AAAAGCGCC-CCGTGACCGTGGATTCCCG CTTTCGCGGGAATGA TERM 2172 4215417 - 4215365 - T 76 -6.2 -4.57073 | gap 1, opp_overlap 4215330 4215378 4215412 4215416, overlap 4215330 CACCTTCGTCAAAAA GCGCCCCGTGACCGTGGATTCCCGC TTTC GCGGGAATG-ACGATGAGGGCGGGC CAGGGGAGGAAGGGT TERM 2173 4215492 - 4215453 - T 73 -12.8 -3.16564 | gap 1 GGCTCACTTCATGAA CAGCATCGCCACCGACTGC TCG GC-GACGCTGGCGACGCCG TCGCGGTTGGCGTCG Swit_3839 4215836 - 4215441 - | hypothetical protein Swit_3840 4216765 - 4216043 - | hypothetical protein Swit_3841 4218379 - 4216907 - | RND efflux system outer membrane lipoprotein Swit_3842 4221522 - 4218376 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 2174 4221159 - 4221190 + g 78 -12.2 -3.79906 | overlap 4221145 4221166 CTTGCTGCTGGACCT GCTGCGGCAGGCGC GGCA GGGCCTGCTGCACC TTGTTCTGCACCTGG Swit_3843 4222726 - 4221533 - | RND family efflux transporter MFP subunit TERM 2175 4222332 - 4222370 + g 82 -16.6 -3.33261 | AGCGGCTTCAGCCGC TGTGCCCGCGCGGCGGCG GCC TGGCGCTGCGCGCGCGCA TTGTCGAGATTGGCG TERM 2176 4222816 - 4222847 + r 89 -17.4 -3.16564 | gap 1, opp_overlap 4222815, overlap 4222819 ATGCGGTTAATTTAC CGTATCCCTCCCCCC GTC GGGGGGAGGGA-ATG TTGCTGCAATGCAGC TERM 2177 4222819 - 4222845 + r 91 -18 -3.14602 | opp_overlap 4222815, overlap 4222816 CGGTTAATTTACCGT ATCCCTCCCCCC GTC GGGGGGAGGGAA TGTTGCTGCAATGCA Swit_3844 4223595 - 4223293 - | GCN5-related N-acetyltransferase Swit_3845 4224923 - 4223796 - | peptide chain release factor 2 Swit_3846 4227493 - 4225019 - | 1A family penicillin-binding protein Swit_3847 4228890 - 4227655 - | N-acetylmuramoyl-L-alanine amidase TERM 2178 4229127 - 4229176 + H 100 -12.7 -4.41616 | overlap 4229128 GCATGAGTCATTTTT CGCCCCGTTCCCTAGGCTGCCAG ACTT CTGGCGGCGCATGGAACGGTGCC TTTCTTTCGGCGCAT TERM 2179 4229128 - 4229175 + H 86 -16.2 -3.24488 | overlap 4229127 CATGAGTCATTTTTC GCCCCGTTCCCTAGGCTGCCAG ACTT CTGGCGGCGCATGGAACGGTGC CTTTCTTTCGGCGCA TERM 2180 4231754 - 4231718 - g 71 -11.3 -3.61398 | CGGTCGCCGCAAGAA GGCCGAGGTCGAGGCGG AAG CCGCTGCGGCCCCCGCC GCCGTGGAAGCTGCG Swit_3848 4229355 - 4231997 + | RNAse E TERM 2181 4232003 - 4232034 + F 100 -23.8 -2.52464 | CGGCGCCTGAGCATG CGGGGCAGGCCTTC GCCG GAGGGCCTGCCCCG TCGCTTCACGCCCGG TERM 2182 4232605 - 4232625 + G 77 -14.7 -3.14132 | opp_overlap 4232599 4232603 GTGCAGGAATCGAGC GCCGATGCC GCG GGCGTCGGC TTCCTCAACAAGGCC Swit_3849 4232080 - 4233462 + | peptidase M48, Ste24p Swit_3850 4233459 - 4234220 + | DSBA oxidoreductase Swit_3851 4234673 - 4234230 - | hypothetical protein Swit_3852 4236196 - 4234709 - | extracellular solute-binding protein TERM 2183 4235606 - 4235558 - G 74 -15.1 -3.05463 | gap 1 ATCGCCCCGAGCGAA GC-GCGCGACCGCCAGCGCGGC CCGCTC GCCGCGCAGGTGGATGCGCCGC TTGGCGAAGGCCTTC Swit_3853 4237779 - 4236193 - | 4-phytase TERM 2184 4237745 - 4237763 + g 78 -6.6 -4.61231 | GGGATTTGGCCCGAT GGGTGGGC AAG GCTCAACC TTTTTCCGCATGTCA TERM 2185 4238522 - 4238510 - g 70 -9.1 -3.90112 | opp_overlap 4238508 GGTCGCCGAAGCAAA GTCGC CGC GCGAC ACCTTGTGGTTCGAA Swit_3854 4237899 - 4239680 + | hypothetical protein Swit_3855 4239787 - 4240704 + | hypothetical protein Swit_3856 4241923 - 4240706 - | major facilitator transporter TERM 2186 4242015 - 4241987 - R 79 -11 -3.85698 | gap 1 GGTGCCGCTCAGAAA CGCACCT-CGCCG GTGA CGGTGAAGGTGCG CGGCGGGCCGTAGAA Swit_3857 4244211 - 4241980 - | TonB-dependent receptor Swit_3858 4245140 - 4244226 - | alpha/beta hydrolase fold TERM 2187 4245163 - 4245180 + r 75 -14.1 -3.09015 | TCCGCTCCCAATCGT GCCGCGC TCCG GCGCGGC TTCCGTCAGTCTCAA Swit_3859 4246299 - 4245259 - | AraC family transcriptional regulator Swit_3860 4247932 - 4246370 - | integral membrane sensor hybrid histidine kinase Swit_3861 4248102 - 4250885 + | TonB-dependent receptor, plug Swit_3862 4250962 - 4252803 + | radical SAM domain-containing protein Swit_3863 4254093 - 4252813 - | fumarylacetoacetate hydrolase Swit_3864 4255418 - 4254090 - | homogentisate 1,2-dioxygenase TERM 2188 4254486 - 4254456 - G 74 -14 -3.27923 | GGGGAAGATCACGAA GTCGCAATTGGCGG TGC CCGCCACTTCCGAC GGCGAGGTCAGCACC Swit_3865 4256514 - 4255411 - | 4-hydroxyphenylpyruvate dioxygenase TERM 2189 4256174 - 4256197 + g 95 -14.6 -4.08692 | gap 1, overlap 4256174 ACCGGTCCTTCGACC GG-GGTCGCGC CGC GCGCGACCGCC TTTTCGAGCGCCTTG TERM 2190 4256174 - 4256196 + g 74 -14.8 -3.04894 | overlap 4256174 ACCGGTCCTTCGACC GGGGTCGCGC CGC GCGCGACCGC CTTTTCGAGCGCCTT Swit_3866 4256567 - 4257019 + | MarR family transcriptional regulator TERM 2191 4257070 - 4257042 - T 71 -14 -2.62184 | gap 1 TCGCCTTGGATATGA TCCGCTCA-CCCT GAGG AGGGCTGAGCGGA TAAGGTGATCCCGAT TERM 2192 4257114 - 4257140 + T 100 -19.4 -4.09243 | CTCCAGATGCGAGTA GGGCCCGATGGC GGT GCCACCGGGCCC TTTTCGGCCACTCTC Swit_3867 4258172 - 4257171 - | hypothetical protein TERM 2193 4258297 - 4258249 - R 84 -11.4 -4.15832 | opp_overlap 4258265 4258290, overlap 4258250 AGCAAGCAGAAAGAA TCGCCCGGCTCAGCCGCCCGGC CTGGC GCCGAGCGCCGGCACCGCGCGG GCGGCGTCGGCCGGG TERM 2194 4258296 - 4258250 - R 78 -14.9 -3.08415 | opp_overlap 4258265 4258290, overlap 4258249 GCAAGCAGAAAGAAT CGCCCGGCTCAGCCGCCCGGC CTGGC GCCGAGCGCCGGCACCGCGCG GGCGGCGTCGGCCGG TERM 2195 4258265 - 4258312 + r 87 -19.1 -2.52464 | opp_overlap 4258250 4258249, overlap 4258290 CGCCCGGCTCAGCCG CCCGGCCTGGCGCCGAGCGC-CG GCAC CGCGCGGGCGGCGTC-GGCCGGG TCGATTCCGGGCGGC Swit_3868 4258803 - 4258258 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 2196 4259188 - 4259137 - g 74 -13.4 -3.29461 | gap 1, opp_overlap 4259152, overlap 4259125 GAAGCCGTCGGAGAA GCGCGCCCGCGAGCGCGCCGCCGCG ATC CGCCGCGCC-CGCAAGCTGGAGCGC AAGCGGATGGAGCGT Swit_3869 4258973 - 4259218 + | SSU ribosomal protein S21P TERM 2197 4259574 - 4259594 + G 77 -14.7 -3.17075 | opp_overlap 4259524 4259567 4259570 GTCGAATATGAGGGC CGCCTCGCC AAT GGCGAGGTG TTCGATTCGAGCGCG Swit_3870 4259295 - 4259864 + | peptidylprolyl isomerase, FKBP-type TERM 2198 4259891 - 4259920 + T 100 -16.5 -4.63218 | opp_overlap 4259891 4259895, overlap 4259895 TCACCGCATAGGAGA GGAAGGGGTCGCA GCGA TGCGGCCCCTTTC TTTTGTTGGGGGCGC TERM 2199 4259895 - 4259916 + T 100 -13.7 -4.87892 | opp_overlap 4259895 4259891, overlap 4259891 CGCATAGGAGAGGAA GGGGTCGCA GCGA TGCGGCCCC TTTCTTTTGTTGGGG TERM 2200 4260139 - 4260107 - T 100 -25 -4.0641 | opp_overlap 4260107 4260110, overlap 4260110 TTCTACTGATACAAA GAACCGCGCGGCGA TCGGC TCGCCGCGCGGTTC TTTCATCGTCCGGGG TERM 2201 4260107 - 4260139 + T 100 -25 -3.78775 | opp_overlap 4260107 4260110, overlap 4260110 TTCTACTGATACAAA GAACCGCGCGGCGA TCGGC TCGCCGCGCGGTTC TTTCATCGTCCGGGG TERM 2202 4260136 - 4260110 - T 100 -20.9 -4.15698 | opp_overlap 4260107 4260110, overlap 4260107 TACTGATACAAAGAA CCGCGCGGCGA TCGGC TCGCCGCGCGG TTCTTTCATCGTCCG TERM 2203 4260110 - 4260136 + T 100 -20.9 -4.0274 | opp_overlap 4260110 4260107, overlap 4260107 TACTGATACAAAGAA CCGCGCGGCGA TCGGC TCGCCGCGCGG TTCTTTCATCGTCCG Swit_3871 4261034 - 4260162 - | signal peptidase I acpS 4261472 - 4261071 - | 4'-phosphopantetheinyl transferase Swit_3873 4262214 - 4261489 - | pyridoxal phosphate biosynthetic protein PdxJ pyrE 4262801 - 4262211 - | orotate phosphoribosyltransferase TERM 2204 4263117 - 4263065 - g 80 -16.7 -3.15544 | GTCCAGGCTCAGGAA GCCGCTCCGGCTCCCGCGGCGCCCG CCG CGGCGGCCCCGGCAGCCGAGGCCGC GCCGGCCGCTCCCGC Swit_3875 4262993 - 4264009 + | cytochrome c oxidase, subunit II Swit_3876 4264021 - 4265709 + | cytochrome c oxidase, subunit I TERM 2205 4265769 - 4265730 - f 84 -13.6 -3.80573 | gap 1, opp_overlap 4265734, overlap 4265733 GTCAGTAGGATGAAA TG-AGCCGCCGCTTCGACG ACT CGTCAGAGCGGCGGTTTCA TTAGGAACGTGAATC TERM 2206 4265765 - 4265733 - f 81 -15.5 -2.98761 | opp_overlap 4265734, overlap 4265730 AGTAGGATGAAATGA GCCGCCGCTTCGACG ACT CGTCAGAGCGGCGGT TTCATTAGGAACGTG TERM 2207 4265734 - 4265764 + F 100 -19 -3.90291 | opp_overlap 4265733 4265730 GTAGGATGAAATGAG CCGCCGCTTCGACG ACT CGTCAGAGCGGCGG TTTCATTAGGAACGT Swit_3877 4265792 - 4266700 + | protoheme IX farnesyltransferase Swit_3878 4266697 - 4266825 + | hypothetical protein Swit_3879 4266822 - 4267400 + | cytochrome C oxidase assembly protein TERM 2208 4267543 - 4267569 + G 74 -10.8 -3.68073 | opp_overlap 4267548 4267549 GGCATCATGTGGATG CACAAGGCCGCT TTC GGCGGCTATGTG TTCTTCGCTGGCCTG Swit_3880 4267435 - 4268304 + | cytochrome c oxidase, subunit III TERM 2209 4268329 - 4268361 + F 100 -25.6 -5.45802 | CCATGACCGCATAGG GGCGCGGCGGCGGG GGAGA CCTGCCGCCGCGCC TTTTTCTTTTCCAAC Swit_3881 4268391 - 4268774 + | hypothetical protein Swit_3882 4268774 - 4269406 + | hypothetical protein Swit_3883 4270407 - 4269373 - | (acyl-carrier-protein) S-malonyltransferase-like protein Swit_3884 4272607 - 4270400 - | branched-chain alpha-keto acid dehydrogenase E1 component Swit_3885 4272888 - 4274405 + | flavin-containing monooxygenase Swit_3886 4274392 - 4275183 + | short-chain dehydrogenase/reductase SDR TERM 2210 4275699 - 4275723 + G 75 -9.9 -4.07885 | opp_overlap 4275688, overlap 4275700 ATAAGCTGATCGTCA GGATCGAGCGC GCC GCGCTCGAGCG TTTTGCCGAGGACTG Swit_3887 4275323 - 4276306 + | AraC family transcriptional regulator Swit_3888 4276366 - 4276635 + | hypothetical protein Swit_3889 4276632 - 4277060 + | PilT domain-containing protein Swit_3890 4277292 - 4277684 + | hemimethylated DNA binding protein Swit_3891 4277881 - 4278243 + | 50S ribosomal protein L21 rpmA 4278270 - 4278539 + | 50S ribosomal protein L27 TERM 2211 4278599 - 4278542 - f 91 -17.7 -3.13522 | gap 1, overlap 4278540 AGCCGCCGAGTAACA TCGGGCG-AGCCCATATTCGGGTCGCCC AGA GGGCGACCCGAAGGTCCGCTGCGCCGGA CCGATGAGGGAGAGG TERM 2212 4278607 - 4278629 + F 100 -12 -4.84527 | GCGCCGGACCGATGA GGGAGAGGGT CGC AACCTCTCCC TTTTTCGTGTCTCCC Swit_3893 4278719 - 4279291 + | GCN5-related N-acetyltransferase Swit_3894 4279329 - 4279988 + | TetR family transcriptional regulator obgE 4280041 - 4281078 + | GTPase ObgE Swit_3896 4281063 - 4282205 + | gamma-glutamyl kinase Swit_3897 4282202 - 4283107 + | NAD-dependent epimerase/dehydratase Swit_3898 4283663 - 4283121 - | hypothetical protein Swit_3899 4283799 - 4284041 + | hypothetical protein Swit_3900 4284046 - 4285248 + | serine palmitoyltransferase Swit_3901 4285313 - 4287298 + | integral membrane sensor hybrid histidine kinase Swit_3902 4288352 - 4287429 - | hypothetical protein Swit_3903 4289337 - 4288366 - | diacylglycerol kinase, catalytic region Swit_3904 4289900 - 4289340 - | hypothetical protein TERM 2213 4289616 - 4289652 + g 73 -7.2 -4.11216 | gap 2, opp_overlap 4289570 GGCCGCACCCGAGGC GGGCA-CCGGC-ACGTCG ACC CGGCGCAGCCAGCTGCCC TTTTCGAAATAGCGG TERM 2214 4290492 - 4290473 - g 73 -12.8 -3.53444 | opp_overlap 4290488 CGATCCGGGTCGAAA GCAGCCGC GAGG GCGGCCGC GAGCTGTCGGGCATC Swit_3905 4289977 - 4291179 + | permease YjgP/YjgQ family protein Swit_3906 4291176 - 4292270 + | permease YjgP/YjgQ family protein Swit_3907 4292306 - 4293136 + | fatty acid hydroxylase Swit_3908 4293136 - 4294284 + | hypothetical protein Swit_3909 4294337 - 4294969 + | lysine exporter protein LysE/YggA Swit_3910 4294980 - 4295276 + | hypothetical protein Swit_3911 4296093 - 4295278 - | exodeoxyribonuclease III Swit_3912 4296530 - 4296195 - | iron-sulfur cluster assembly accessory protein TERM 2215 4296341 - 4296363 + g 78 -17 -2.73875 | overlap 4296339 4296343 CGACCACCAGCGTCA CGCCGTCGCG GGT CGCGACGGTG TCGTCTTCGGCCGGG TERM 2216 4296343 - 4296361 + g 75 -16 -2.9155 | overlap 4296341 4296339 ACCACCAGCGTCACG CCGTCGCG GGT CGCGACGG TGTCGTCTTCGGCCG Swit_3913 4297292 - 4296603 - | peptidase M23B Swit_3914 4298203 - 4297358 - | hypothetical protein Swit_3915 4299150 - 4298203 - | histone deacetylase superfamily protein Swit_3916 4299186 - 4300136 + | alpha/beta hydrolase domain-containing protein Swit_3917 4300133 - 4300609 + | NUDIX hydrolase TERM 2217 4300821 - 4300792 - g 71 -10.7 -3.64822 | gap 1 ACGCCGCTACCGAAA CGGCGAAGGACGAC ATC GTCGT-CACCGCCG CGCGCAGCATCCTGC Swit_3918 4300698 - 4302884 + | TonB-dependent receptor Swit_3919 4302944 - 4303936 + | PepSY-associated TM helix domain-containing protein Swit_3920 4304392 - 4303931 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Swit_3921 4306190 - 4304442 - | glutamate-ammonia ligase adenylyltransferase TERM 2218 4304473 - 4304485 + g 71 -10.5 -3.73224 | ATCGTCCGCGCGACG GCCGC CTG GCGGC TTTCCTGCACGATCA Swit_3922 4309147 - 4306418 - | (glutamate--ammonia-ligase) adenylyltransferase TERM 2219 4308476 - 4308449 - G 77 -14.8 -3.14132 | gap 1, opp_overlap 4308448 4308447 GCGGGCGCGGATGAA GGCGGCGC-GCTC CCA GGGCAGCGCCGCC GATTCATAATAGCTG Swit_3923 4309175 - 4309363 + | hypothetical protein TERM 2220 4309401 - 4309363 - T 82 -14.5 -3.38046 | gap 1, opp_overlap 4309376 4309378, overlap 4309361 4309364 GCTCGACCGCAAATA GGGCGGAAG-CGCGCCGC GACG GCGGCGGGGCCTCCGCCG GTCGTCCCTATTCCT TERM 2221 4309400 - 4309364 - T 86 -18 -2.62613 | gap 1, opp_overlap 4309376 4309378, overlap 4309363 4309361 CTCGACCGCAAATAG GGCGGAAG-CGCGCCGC GACG GCGGCGGGGCCTCCGCC GGTCGTCCCTATTCC Swit_3924 4310104 - 4309409 - | ECF subfamily RNA polymerase sigma-24 factor Swit_3925 4311004 - 4310210 - | two-component response regulator TERM 2222 4311609 - 4311635 + G 71 -10 -3.73953 | CAAGATGCTGCTGAT CCTGTCGGCGGC GAT GCTGCCGCTGGG TTTCATCGCGCTGCT Swit_3926 4311547 - 4313085 + | signal transduction histidine kinase TERM 2223 4313206 - 4313252 + F 93 -7.2 -5.01732 | gap 1, opp_overlap 4313209, overlap 4313207 4313208 4313243 CGCTATCCGCTCGAC AAAGGGCCCGGTCGCA-TTAC CCCCCC GTAAATGCGTCCGGGCCCAAC TTTTTTGGGCAAGTT TERM 2224 4313207 - 4313251 + F 73 -10.7 -3.60316 | gap 1, opp_overlap 4313209, overlap 4313206 4313208 4313243 GCTATCCGCTCGACA AAGGGCCCGGTCGCA-TTAC CCCCCC GTAAATGCGTCCGGGCCCAA CTTTTTTGGGCAAGT TERM 2225 4313208 - 4313250 + F 75 -14.2 -2.75708 | gap 1, opp_overlap 4313209, overlap 4313207 4313206 4313243 CTATCCGCTCGACAA AGGGCCCGGTCGCA-TTAC CCCCCC GTAAATGCGTCCGGGCCCA ACTTTTTTGGGCAAG TERM 2226 4313249 - 4313209 - f 100 -17.7 -3.86015 | gap 1, opp_overlap 4313208 4313207 4313206 4313243 TATCCGCTCGACAAA GGGCCCGGTCGCA-TTAC CCCCCC GTAAATGCGTCCGGGCCC AACTTTTTTGGGCAA Swit_3927 4313301 - 4313528 + | entericidin EcnAB TERM 2227 4313564 - 4313542 - T 78 -11.9 -3.76968 | AAGCCATCGACGAAA GTGCCCGCC TTCAT GGCGGGCGC GACACGGGATCAGGC TERM 2228 4313578 - 4313604 + T 100 -18 -4.30576 | GCGACACGGGATCAG GCCCGGGACGGT CAG GCCGTCTCGGGC TTTTCCTCATCCCCG Swit_3928 4314356 - 4313589 - | Sec-independent protein translocase TatC Swit_3929 4314736 - 4314353 - | twin-arginine translocation protein, TatB subunit Swit_3930 4315023 - 4314766 - | twin arginine-targeting protein translocase Swit_3931 4315762 - 4315175 - | condensin subunit ScpB Swit_3932 4316532 - 4315759 - | condensin subunit ScpA Swit_3933 4317591 - 4316578 - | Beta-N-acetylhexosaminidase TERM 2229 4317663 - 4317692 + r 74 -14.9 -2.54634 | overlap 4317662 CGCGCTGCGCTGCTC CCGAGACCCCGGC CTCC GCCGGGGTGACGG ATTCATCCTATCCGA Swit_3934 4318494 - 4317700 - | sporulation domain-containing protein Swit_3935 4320224 - 4318494 - | arginyl-tRNA synthetase TERM 2230 4318837 - 4318793 - G 71 -10.4 -3.68351 | CGTCGAGCAGGGAAA GGTCCGCCGCCGGGGCCAGG TCGAT CCCCGCCTCGGCCGCGCGCC GGTGCAGCGAGCGGC TERM 2231 4319103 - 4319129 + g 73 -15.8 -2.50994 | overlap 4319102 GTCGAACGCGACCTT GCCGCCGGTCAG CGC CTGGACGGCGGC CTTGATCCGCTTGAC Swit_3936 4322189 - 4320339 - | peptidase M28 Swit_3937 4323352 - 4322189 - | putative deoxyguanosinetriphosphate triphosphohydrolase TERM 2232 4322528 - 4322486 - G 70 -12.7 -3.28924 | gap 2, overlap 4322487 CATCGCCTCGGAGAA GCCGATCAGCGGCCGGCCCGC CGC GCGGACCG-CCTC-GACCGAC CGGGGCGCGGCCTCG Swit_3938 4323805 - 4323389 - | hypothetical protein Swit_3939 4325327 - 4323876 - | sporulation domain-containing protein TERM 2233 4324314 - 4324344 + g 72 -13.2 -3.14132 | overlap 4324336 TTCGGCCGAGGCCGA GGTCGACGTCGTCG GCG CGGCGGCGTCGGGC TTCATCACCAGCCGG TERM 2234 4325067 - 4325013 - G 78 -12.7 -3.71848 | gap 1 GGCCCGGACGAAGAA GTTGATCGCGGCATCGGCGTCGC-CG ACCG CGAGCGCCGCCGATCCGGCGCCCGAC AGGGCGTCGAGGTCG TERM 2235 4325390 - 4325355 - R 91 -16.3 -3.62591 | gap 2, opp_overlap 4325348 4325356, overlap 4325358 GGCAGAACGCCGAAA CGAGTTACGCCCGCGCC GATC GGCGCGGGCGTAA--CG ATATTGCACGCTTAC TERM 2236 4325356 - 4325391 + r 91 -19 -3.04501 | opp_overlap 4325355 4325358, overlap 4325348 GCAGAACGCCGAAAC GAGTTACGCCCGCGCC GATC GGCGCGGGCGTAACGA TATTGCACGCTTACT TERM 2237 4325389 - 4325358 - R 100 -26 -2.92935 | opp_overlap 4325356 4325348, overlap 4325355 AGAACGCCGAAACGA GTTACGCCCGCGCC GATC GGCGCGGGCGTAAC GATATTGCACGCTTA Swit_3940 4326889 - 4325402 - | cell division protein FtsZ Swit_3941 4328288 - 4327029 - | cell division protein FtsA Swit_3942 4329237 - 4328323 - | polypeptide-transport-associated domain-containing protein Swit_3943 4330172 - 4329234 - | D-alanine--D-alanine ligase TERM 2238 4329704 - 4329716 + g 76 -7.7 -4.35042 | GATGAATCGGCACGC CGTGA TTG TCACG TTCTTTTATGATCGC TERM 2239 4330035 - 4329995 - G 74 -15.4 -3.02144 | overlap 4329998 GCAGCGCGTTGAACA CCACGTCGGGCTTCGCCT CGGCC AGGCGCAGCGCGACGTCG CGGTCCATGTCGATC TERM 2240 4330032 - 4329998 - G 70 -15.7 -2.73875 | overlap 4329995 GCGCGTTGAACACCA CGTCGGGCTTCGCCT CGGCC AGGCGCAGCGCGACG TCGCGGTCCATGTCG TERM 2241 4330206 - 4330180 - R 86 -12.2 -4.13767 | overlap 4330181 TGGGTCACGCGAAAA TCCTCCCTGTCC GAA GGACGGGGAGGG GGACCGCGCGAAGCG TERM 2242 4330205 - 4330181 - R 81 -15.7 -3.08046 | overlap 4330180 GGGTCACGCGAAAAT CCTCCCTGTCC GAA GGACGGGGAGG GGGACCGCGCGAAGC Swit_3944 4331235 - 4330315 - | UDP-N-acetylmuramate dehydrogenase Swit_3945 4331432 - 4331232 - | hypothetical protein murC 4332850 - 4331429 - | UDP-N-acetylmuramate--L-alanine ligase murG 4334007 - 4332847 - | N-acetylglucosaminyl transferase Swit_3948 4335221 - 4334004 - | cell cycle protein Swit_3949 4336705 - 4335218 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 2243 4336457 - 4336431 - G 86 -13.6 -3.92324 | overlap 4336432 TCGGCCAATACCAAA TCCTCCCCGCGC GCA GCGGGGGGAGGG GGACCATCCGCAGGA TERM 2244 4336456 - 4336432 - G 80 -17.1 -2.95073 | overlap 4336431 CGGCCAATACCAAAT CCTCCCCGCGC GCA GCGGGGGGAGG GGGACCATCCGCAGG TERM 2245 4336537 - 4336563 + g 100 -10.8 -5.00616 | overlap 4336538 CGGCTTCGCCGGTCC CCCTCCCCATGC TGC GCATAGGGAGGA TTTTTTGGCGCGCCG TERM 2246 4336538 - 4336562 + g 78 -14.3 -3.60048 | overlap 4336537 GGCTTCGCCGGTCCC CCTCCCCATGC TGC GCATAGGGAGG ATTTTTTGGCGCGCC Swit_3950 4337772 - 4336702 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Swit_3951 4339178 - 4337760 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase murE 4340769 - 4339306 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Swit_3953 4342495 - 4340756 - | peptidoglycan glycosyltransferase TERM 2247 4342453 - 4342490 + g 82 -14.8 -3.45634 | gap 1 TGGTCTTGACGAGGG CGCGGTCGCGCGGCGGG GCTAG CCCGGCG-GCGGTCGCG TTCATTGCTTCCCCT Swit_3954 4343109 - 4342492 - | hypothetical protein Swit_3955 4344074 - 4343106 - | S-adenosyl-methyltransferase MraW Swit_3956 4344598 - 4344071 - | hypothetical protein Swit_3957 4345269 - 4345036 - | hypothetical protein Swit_3958 4346359 - 4345361 - | cysteine synthase A Swit_3959 4346422 - 4346994 + | uracil-DNA glycosylase superfamily protein TERM 2248 4347353 - 4347323 - g 86 -13.2 -3.84271 | CTACAAGACCAAGAA GGAAGAGGTCGGCG TTC CGCTGACCGCTCCC GAGGCCGGCAAGCCC Swit_3960 4347078 - 4347458 + | hypothetical protein TERM 2249 4347510 - 4347483 - T 84 -13.4 -3.68351 | gap 1, opp_overlap 4347483 CCCTGATCATCGAAA GGCCGGTTGGAGC GAT GCTCCT-CCGGCC TTTTTTGATGCGCCG TERM 2250 4347483 - 4347510 + T 100 -13.4 -5.14563 | gap 1, opp_overlap 4347483 CCCTGATCATCGAAA GGCCGGTTGGAGC GAT GCTCCT-CCGGCC TTTTTTGATGCGCCG TERM 2251 4347657 - 4347643 - T 78 -10 -4.07568 | opp_overlap 4347643 GCCGGTGCCGCAAAA TGCGGT GAA ACCGCA TTTTCCAAACAGACT TERM 2252 4347643 - 4347657 + T 78 -10 -4.07687 | opp_overlap 4347643 GCCGGTGCCGCAAAA TGCGGT GAA ACCGCA TTTTCCAAACAGACT Swit_3961 4348139 - 4347672 - | YbaK/prolyl-tRNA synthetase associated region Swit_3962 4349334 - 4348144 - | hypothetical protein TERM 2253 4348255 - 4348225 - G 74 -13.2 -3.35679 | overlap 4348209 CTGCGCGACCGAGAA GCCGCGCGCGATCA GCA TGACCGCGAGCCGC TCGACCTCCGGCCGG Swit_3963 4350404 - 4349379 - | phytanoyl-CoA dioxygenase TERM 2254 4349837 - 4349811 - G 76 -13.6 -3.49777 | opp_overlap 4349832 GGGGACATAGGAGAA CGGGCCGTCGGC GGG GCCGACGTCCTG GAGGAACAGCCAGGC Swit_3964 4351216 - 4350413 - | 3-deoxy-manno-octulosonate cytidylyltransferase Swit_3965 4352223 - 4351231 - | KpsF/GutQ family protein Swit_3966 4353781 - 4352363 - | hypothetical protein Swit_3967 4353958 - 4354800 + | metallophosphoesterase TERM 2255 4355082 - 4355112 + G 74 -14 -3.37796 | gap 1, overlap 4355077 CGCCGGCCTCTGGCT GCTGG-GCCGCCC TGCCTT GGGCGGCGCCGGC TTCTGGATGATCGCC Swit_3968 4354867 - 4357530 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2256 4357558 - 4357532 - T 75 -12.2 -3.58037 | overlap 4357533 CAGCAACCCTCTAAA TCCTCCCTGTCC GGA GGACGGGGAGGG GGACCACCCGCAGGG TERM 2257 4357557 - 4357533 - T 78 -15.7 -2.74501 | overlap 4357532 AGCAACCCTCTAAAT CCTCCCTGTCC GGA GGACGGGGAGG GGGACCACCCGCAGG Swit_3969 4357965 - 4357585 - | hypothetical protein TERM 2258 4357971 - 4357999 + r 100 -15.9 -5.26875 | overlap 4357972 TGCTGCGCATGGTCC CCCTCCCCGCCGC TGC GCGGCAGGGAGGA TTTTTTAGTTGGCCA TERM 2259 4357972 - 4357998 + r 100 -19.4 -3.75402 | overlap 4357971 GCTGCGCATGGTCCC CCTCCCCGCCGC TGC GCGGCAGGGAGG ATTTTTTAGTTGGCC Swit_3970 4360178 - 4358004 - | phosphoribosylformylglycinamidine synthase II TERM 2260 4360488 - 4360521 + G 72 -14.5 -2.87132 | GGTGCGGTGGCGGCT GGCGGGCGACGCC TTCGACCT GGCGGCGCTCGCC TATATCGCCGCGCCC Swit_3971 4360273 - 4360653 + | hypothetical protein TERM 2261 4360746 - 4360705 - g 70 -15.7 -2.81464 | GGAGCAGCCATGAGA TCGAGCGCGAATTGCCGCG ATTG CGCGGCTATGCGCGCGCGT TGACCAGGGACGCGG Swit_3972 4360680 - 4361207 + | ECF subfamily RNA polymerase sigma-24 factor Swit_3973 4361197 - 4361952 + | putative transmembrane anti-sigma factor TERM 2262 4362222 - 4362246 + G 72 -14.3 -3.14931 | opp_overlap 4362189 4362185 CCAGGGCCGCATCGC CCATCGGATGC CCG GCATCCGCTGG TTCCTCGACCATGAC Swit_3974 4361971 - 4363062 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2263 4363103 - 4363064 - T 100 -25.2 -3.57144 | overlap 4363065 GCGCGGAGGCGTAAA TCCATCCGTCATCCTGGC GAAA GCCAGGATGACGGATGGG GGGAGGATGCCTCTC TERM 2264 4363102 - 4363065 - T 100 -28.7 -2.74144 | overlap 4363064 CGCGGAGGCGTAAAT CCATCCGTCATCCTGGC GAAA GCCAGGATGACGGATGG GGGGAGGATGCCTCT Swit_3975 4363734 - 4363117 - | hypothetical protein Swit_3976 4365911 - 4363731 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 2265 4365478 - 4365532 + g 74 -15.7 -3.04144 | gap 1 CATTCGGCGGCGGCG GCCTGGACCAGCATCGCCCGCGCC ATCGCGCC GGCGCGG-CGGAGCTGGTCGAAGC TGTTGGCGATCGCGG Swit_3977 4366369 - 4365908 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Swit_3978 4366393 - 4367508 + | exonuclease of the beta-lactamase fold involved in RNA processing-like protein TERM 2266 4368540 - 4368593 + G 100 -23.1 -3.53224 | gap 1, overlap 4368575 CTGCTGATCGACGGC GGCGACGATCTGCGCGCGCTGC-CCT GGG AGGCGCGGCGCGCGCGGCTCGAAGCC TTTGCCGCGCGGCTC Swit_3979 4367562 - 4369160 + | ATP-dependent DNA ligase TERM 2267 4369243 - 4369224 - T 74 -15 -2.62024 | overlap 4369220 GACGATCACAATGGA CGGAGCGC TTCA GCGCTCCG CAAGGCCGAACGGCC TERM 2268 4369301 - 4369284 - T 73 -12.7 -3.20901 | ATGCGAGGAAGCCAA GGCGGAC GGAC GTCCGCC GCCCGGCGTCTGAGG Swit_3980 4370725 - 4369319 - | methyl-accepting chemotaxis sensory transducer Swit_3981 4370839 - 4371696 + | Ku family containing protein Swit_3982 4371700 - 4374213 + | DNA ligase D Swit_3983 4374264 - 4374593 + | antibiotic biosynthesis monooxygenase TERM 2269 4374687 - 4374708 + T 87 -17.3 -2.92668 | opp_overlap 4374687, overlap 4374682 TCCAGGCACAAAAAA TGGGCGCCC CGAG GGGCGCCCA TCTCGTTCGGTAATC TERM 2270 4374708 - 4374687 - T 100 -17.3 -5.28176 | opp_overlap 4374687 4374682 TCCAGGCACAAAAAA TGGGCGCCC CGAG GGGCGCCCA TCTCGTTCGGTAATC Swit_3984 4374980 - 4374747 - | hypothetical protein Swit_3985 4375611 - 4375198 - | BadM/Rrf2 family transcriptional regulator TERM 2271 4375695 - 4375709 + H 71 -9.2 -3.70902 | CGATCATGTCCGCTT GCGTCG CAA CGGCGC TTTCCCTATGGAGCG Swit_3986 4375947 - 4376996 + | Glu/Leu/Phe/Val dehydrogenase, dimerisation region TERM 2272 4377002 - 4377056 + T 74 -13.4 -2.96274 | CCGGGGCTGAGCTTC CCTTCGCGGCGGCGTTCCCGGTCGAG CTA TTCGATCGGCGGCGTCGCCGCGACCA TGTCCTTGTGCAGCC Swit_3987 4377957 - 4377028 - | hypothetical protein Swit_3988 4378051 - 4378767 + | heme exporter protein CcmC Swit_3989 4378895 - 4379362 + | CcmE/CycJ protein Swit_3990 4379359 - 4381284 + | cytochrome c assembly protein Swit_3991 4381281 - 4381808 + | periplasmic protein thiol--disulphide oxidoreductase DsbE TERM 2273 4381850 - 4381824 - g 76 -13.6 -3.53091 | overlap 4381825 AGGGCTTGCCTGAAA TCCTCCCCGCGC GCA GCGGGGGGAGGG GGACCATCCGCAGGA TERM 2274 4381849 - 4381825 - g 78 -17.1 -2.71712 | overlap 4381824 GGGCTTGCCTGAAAT CCTCCCCGCGC GCA GCGGGGGGAGG GGGACCATCCGCAGG TERM 2275 4381878 - 4381892 + G 74 -12.8 -3.61398 | GGATGGTGGAGGGGT GGCGCC GCC GGCGCC TTCTTCCGAAGGCGC TERM 2276 4381910 - 4381936 + G 75 -5.1 -4.56597 | overlap 4381911 CTTCCGAAGGCGCCC CCCTCCACCG-GC TTC GCGCGG-GGAGGA TTTTTGGCGGCGGCG Swit_3992 4381805 - 4382341 + | cytochrome C biogenesis protein Swit_3993 4382341 - 4382973 + | cytochrome c biogenesis factor-like protein Swit_3994 4382986 - 4383228 + | hypothetical protein TERM 2277 4383617 - 4383651 + F 89 -14.4 -3.85698 | opp_overlap 4383622 4383625 AGTCAGAATCCTCCA GCGAATAACCCGGC CCCCAAA GCCGGGTTATTCAC TTTCTGGCGCAGCGC TERM 2278 4383646 - 4383622 - f 71 -12.9 -3.06133 | opp_overlap 4383617, overlap 4383625 GAATCCTCCAGCGAA TAACCCGGCCC CCA AAGCCGGGTTA TTCACTTTCTGGCGC TERM 2279 4383643 - 4383625 - f 70 -10.2 -3.67597 | opp_overlap 4383617, overlap 4383622 TCCTCCAGCGAATAA CCCGGCCC CCA AAGCCGGG TTATTCACTTTCTGG Swit_3995 4383751 - 4385913 + | hypothetical protein Swit_3996 4385910 - 4386653 + | hypothetical protein Swit_3997 4386650 - 4387729 + | GSCFA Swit_3998 4388701 - 4387733 - | methyltransferase type 11 Swit_3999 4389425 - 4388760 - | hypothetical protein TERM 2280 4389483 - 4389508 + H 76 -6.1 -4.62069 | gap 1, opp_overlap 4389489, overlap 4389485 CAGCGCGTGCGTGGC GATCA-AGGCCG GAT CGGCCTATGGGC TTTTTCCGATCAAGC Swit_4000 4389544 - 4390743 + | hypothetical protein Swit_4001 4390740 - 4394645 + | glycosyl transferase family protein TERM 2281 4395527 - 4395580 + G 78 -13.8 -3.60348 | gap 1, opp_overlap 4395539 GCAGTGGCTATCGTT CGCGGGCAAGAAGCGGCCGGCGG CGGGATGGC CCGCCGGTCGCTA-TGGCGCGCG TTATGTGGTGTTGCG TERM 2282 4395569 - 4395539 - g 74 -12.5 -3.61398 | opp_overlap 4395527 GTTCGCGGGCAAGAA GCGGCCGGCGG CGGGATGGC CCGCCGGTCGC TATGGCGCGCGTTAT Swit_4002 4394655 - 4395641 + | peptidase M23B Swit_4003 4395689 - 4396909 + | glycosyl transferase, group 1 TERM 2283 4397165 - 4397182 + T 90 -14.1 -4.07568 | opp_overlap 4397165 TCGCAAAAAGAAAAA GGCCGGC TTTC GCCGGCC TTTTGAACCGGGAGC TERM 2284 4397182 - 4397165 - T 100 -14.1 -5.61881 | opp_overlap 4397165 TCGCAAAAAGAAAAA GGCCGGC TTTC GCCGGCC TTTTGAACCGGGAGC Swit_4004 4398507 - 4397233 - | hemolysin-type calcium-binding region TERM 2285 4397434 - 4397412 - G 73 -12 -3.40522 | AGCCGGTGACCAGAA CACCCTCGAC ATA GTCGAGAGCG GCCGCAACGGTGGTG TERM 2286 4398799 - 4398772 - R 81 -2.7 -5.17054 | overlap 4398764 ATAATATCGAAAAAA GCAGCGAAA CGAAGCCCTT TTTCGCGGC GCGGCAAGGTCTGAG Swit_4005 4399666 - 4398896 - | sulfotransferase Swit_4006 4401078 - 4399663 - | HlyD family type I secretion membrane fusion protein Swit_4007 4402796 - 4401075 - | type I secretion system ATPase Swit_4008 4404573 - 4402885 - | TolC family type I secretion outer membrane protein TERM 2287 4403468 - 4403512 + g 70 -8.4 -3.85864 | gap 1 GCCAGGACGACGTCC TGGAGCGCCTGCCGCCGTTCG CCGT CGAGCG-CGGCCTGCGCGGCA TTGTTCTGGTCCTGC TERM 2288 4407605 - 4407638 + G 81 -18.8 -2.78463 | ACCTGCCGACCGACC GCGCCGCGTGGGTC ATCCTC GCCCCGCGCGGCGC TATCCTCGCGCCGAT Swit_4009 4404775 - 4408935 + | glycosyl transferase, group 1 Swit_4010 4408984 - 4411644 + | hypothetical protein Swit_4011 4411802 - 4412755 + | methyltransferase type 12 Swit_4012 4413826 - 4412789 - | methyltransferase type 12 Swit_4013 4414721 - 4413828 - | hypothetical protein TERM 2289 4414745 - 4414784 + r 79 -16.6 -2.52795 | gap 2 TCCCCTGCTGTCCCG TGGCCGCTCCATCCCGCG AATATA CGCGGGATG--GCGGCCA TCCATTCCCCAACTT Swit_4014 4415976 - 4414813 - | capsule polysaccharide export-like protein Swit_4015 4416803 - 4416009 - | ABC-2 type transporter Swit_4016 4418071 - 4416800 - | glycosyl transferase, group 1 Swit_4017 4420436 - 4418082 - | glycosyl transferase, group 1 Swit_4018 4420691 - 4421248 + | dTDP-4-dehydrorhamnose 3,5-epimerase Swit_4019 4421259 - 4422317 + | dTDP-glucose 4,6-dehydratase Swit_4020 4422314 - 4423204 + | dTDP-4-dehydrorhamnose reductase Swit_4021 4423209 - 4424078 + | glucose-1-phosphate thymidylyltransferase Swit_4022 4424078 - 4424578 + | cyclic nucleotide-binding protein Swit_4023 4425731 - 4424679 - | rod shape-determining protein MreB Swit_4024 4426596 - 4425844 - | Sel1 domain-containing protein TERM 2290 4426704 - 4426662 - R 70 -9.9 -3.57792 | opp_overlap 4426693, overlap 4426691 4426693 TGATTCAGCCTGAAA CGTGAATCAAGGTCTCAAC CAATT GAAGAGAGCCTGATTCACG CCATCGGTGGAAGCG Swit_4025 4429269 - 4426789 - | TonB-dependent siderophore receptor TERM 2291 4430133 - 4430179 + G 72 -4.9 -4.38927 | overlap 4430134 GGCGTCGAGGGCGAG GCGGCGCTGGGCG-GCAAGGGCG TGT CGGCCT-GCGCGACCTGCGACGG TTTCTTCTATCGCGG Swit_4027 4429755 - 4430726 + | thioredoxin reductase TERM 2292 4430847 - 4430873 + T 100 -13.1 -5.23016 | gap 1, overlap 4430850 CCGTACCCCACCCTT TCATCCCTCCCC TGAA GGGGAGGGA-GA TTTTTTGGATTATTT TERM 2293 4430850 - 4430871 + T 78 -15.9 -2.81195 | overlap 4430847 TACCCCACCCTTTCA TCCCTCCCC TGAA GGGGAGGGA GATTTTTTGGATTAT Swit_4028 4431158 - 4430883 - | hypothetical protein Swit_4029 4431285 - 4432814 + | AMP-dependent synthetase and ligase Swit_4030 4432811 - 4434052 + | Orn/DAP/Arg decarboxylase 2 TERM 2294 4434284 - 4434253 - g 73 -12.2 -3.5002 | gap 1, overlap 4434249 GCCAAGGACAAGGAA CTGCCGTCGGCGCCC TTC GTGC-CCGACGGCGG CGCGCCGGGCGAGGA Swit_4031 4434154 - 4434804 + | polysaccharide export protein TERM 2295 4436278 - 4436305 + G 77 -14.8 -3.18023 | overlap 4436277 CAGATGATGTGGTTC TCCTCGGCCGCC GCGG GGCTGCCGGGGA TGTTCATGCTGCTGA Swit_4032 4434835 - 4436358 + | PEP-CTERM locus polysaccharide chain length determinant Swit_4033 4436363 - 4437484 + | ATPase involved in chromosome partitioning-like protein Swit_4034 4437481 - 4439091 + | hypothetical protein Swit_4035 4439130 - 4440728 + | AAA ATPase Swit_4036 4440703 - 4441581 + | PEP-CTERM locus, polysaccharide deactylase Swit_4037 4441585 - 4442634 + | hypothetical protein Swit_4038 4442634 - 4443824 + | glycosyl transferase, group 1 Swit_4039 4443828 - 4445729 + | asparagine synthase (glutamine-hydrolyzing) Swit_4040 4446151 - 4445735 - | peptidylprolyl isomerase, FKBP-type truA 4446912 - 4446148 - | tRNA pseudouridine synthase A Swit_4042 4447835 - 4446909 - | methionyl-tRNA formyltransferase Swit_4043 4447888 - 4448484 + | recombination protein RecR Swit_4044 4448573 - 4448950 + | hypothetical protein Swit_4045 4449033 - 4449566 + | peptide deformylase TERM 2296 4449650 - 4449598 - T 73 -11.4 -3.65902 | gap 2, opp_overlap 4449587, overlap 4449634 GTCATTCCAGCGAAA GCTGGAATCTCTCTGCC-TTGT-CGG CTG CCGGAGAAAGGCAGGGAGATCCCGGC CTTCGCCGGGATGAC TERM 2297 4449651 - 4449634 - T 71 -8.3 -3.85698 | overlap 4449598 CGGCTGCCGGAGAAA GGCAGGG AGAT CCCGGCC TTCGCCGGGATGACG Swit_4046 4450369 - 4449686 - | putative hydroxylase TERM 2298 4450228 - 4450241 + g 73 -9.5 -3.9461 | CCGCGTCCCCGTCCT CCGGC AATT GCCGG TTCTTCTTGGCGAGC Swit_4047 4451114 - 4450377 - | TonB family protein TERM 2299 4451210 - 4451193 - H 74 -4.7 -4.57073 | GACGGTCGTCAAAAA GCGCCGA TATT CCGGAGC GTGACGAAGCGCCCC Swit_4048 4451246 - 4453555 + | RNAse R Swit_4049 4453619 - 4454005 + | hypothetical protein dcd 4454540 - 4453986 - | deoxycytidine triphosphate deaminase Swit_4051 4455127 - 4454672 - | cytidine deaminase TERM 2300 4454782 - 4454807 + g 72 -13.2 -3.24747 | AATAGATGTCGATGT CGTGGCCGCC GAGCTG GGCGGCCTCG TTGATGATCTGGCGG Swit_4052 4455689 - 4455138 - | hypothetical protein TERM 2301 4455695 - 4455658 - G 76 -13.6 -3.53224 | gap 1, opp_overlap 4455666, overlap 4455659 GAGCCGCTTGGCAAA GTGAAGCATGCAGATCC TTGGG GGGTCTGCATGCTTC-C AGTTGGCCTCGGGGG Swit_4053 4456766 - 4455717 - | secretion protein HlyD family protein Swit_4054 4457287 - 4456763 - | MarR family transcriptional regulator Swit_4055 4457356 - 4458870 + | replicative DNA helicase Swit_4056 4459839 - 4459075 - | phosphoadenosine phosphosulfate reductase Swit_4057 4460257 - 4459832 - | hypothetical protein Swit_4058 4461884 - 4460250 - | sulfite reductase (ferredoxin) TERM 2302 4460837 - 4460871 + g 71 -10.7 -3.63991 | gap 1, overlap 4460805 CGACGACGTCCATCT GGTCGGCGCTGATGTC GCCC GGCGTCT-CGCCGACC TTCTTCAGGCTGATC Swit_4059 4462180 - 4461884 - | hypothetical protein Swit_4060 4462974 - 4462177 - | uroporphyrinogen-III C-methyltransferase TERM 2303 4463011 - 4463027 + H 77 -3.7 -4.93877 | opp_overlap 4463003 CGCAAATCAAGGATG CTTGG GGGGCGG CCAAG TTTTCTTTGCTCAAG TERM 2304 4463167 - 4463222 + H 100 -5.4 -5.54079 | opp_overlap 4463167, overlap 4463178 GTCTCCCCGCAACGA CGCG-ACGGCGGCCCCATCCGCCCCG CATTTT CCGGGTGCATGGGGTTG-TGTGTGCG TTTTTTCATTTTTCC TERM 2305 4463178 - 4463211 + H 70 -10.2 -3.63656 | opp_overlap 4463167, overlap 4463167 ACGACGCGACGGCGG CCCCATCCGCCCCG CATTTT CCGGGTGCATGGGG TTGTGTGTGCGTTTT TERM 2306 4463894 - 4463836 - H 82 -14.4 -3.35046 | gap 1, overlap 4463841 TCATCTCGCCAAAGA CATCACTTCCAAGTTTCATGAAAATAT GATTTT ATATTTTCATGAAACTTGGA-GAAACG GCGGACGGAGGCGAT TERM 2307 4463889 - 4463841 - H 84 -17.3 -2.80821 | gap 1, overlap 4463836 TCGCCAAAGACATCA CTTCCAAGTTTCATGAAAATAT GATTTT ATATTTTCATGAAACTTGGA-G AAACGGCGGACGGAG TERM 2308 4465120 - 4465164 + G 81 -7.9 -4.58773 | gap 2, overlap 4465121 CGAGGCCGACCGCTG CCCGCTGTGGCTCTGGGAGGA GGCGA TCCTCCAAG-GCTAC-GCGGC TTTTCGTTTCCTCCA Swit_4062 4464074 - 4465249 + | MazG nucleotide pyrophosphohydrolase Swit_4063 4465249 - 4465950 + | hypothetical protein Swit_4064 4466699 - 4465917 - | hypothetical protein Swit_4065 4467345 - 4466671 - | peptidase C1A, papain Swit_4066 4468361 - 4467351 - | hypothetical protein Swit_4067 4468742 - 4468365 - | helix-turn-helix domain-containing protein Swit_4068 4469077 - 4468739 - | hypothetical protein TERM 2309 4469133 - 4469117 - R 71 -10.9 -3.49102 | ATATCTCCTATATAA TGTCGGA AAA TCCGACA TGCAAGCGGTTCGAA Swit_4069 4469963 - 4469229 - | hypothetical protein TERM 2310 4469476 - 4469439 - G 78 -9.7 -4.16943 | opp_overlap 4469441 TTCTAGACTGGAAAA TGGCTTGCCGAGGGGGG CCTG CCCGCCTTGGCAGGCTA GGTTCACGAAATACT TERM 2311 4469441 - 4469474 + g 73 -16.7 -2.52676 | opp_overlap 4469439 CTAGACTGGAAAATG GCTTGCCGAGGGGGG CCTG CCCGCCTTGGCAGGC TAGGTTCACGAAATA Swit_4070 4471288 - 4470131 - | hemolysin-type calcium-binding region TERM 2312 4470985 - 4470973 - G 75 -10.5 -4.07885 | CATCGCCGGCGAAAA GCGCG ATG CGCGC CGTCGATGCGCGTGC Swit_4071 4471368 - 4471703 + | hypothetical protein Swit_4072 4472085 - 4472384 + | hypothetical protein Swit_4073 4472381 - 4472635 + | hypothetical protein Swit_4074 4473634 - 4472702 - | hypothetical protein TERM 2313 4473537 - 4473553 + g 95 -15.1 -4.07568 | GGAATCCCGCGCCAT CGGCCCG GGA CGGGCCG TTTTCGCGACGGACC TERM 2314 4473638 - 4473658 + r 73 -11.1 -3.53811 | opp_overlap 4473620 TGGCCGGATCATGCG CCGGCACGA TCG TCATGCCGG TTTCCCGAAGCTCGA Swit_4075 4474790 - 4473927 - | transglutaminase domain-containing protein TERM 2315 4474729 - 4474785 + g 72 -13.3 -3.14931 | gap 3 GCGAGCAGGCGATGC GGTTG-CA-CCGTCACCGGACGGCGATA GCGA TATCG-TGTCCGGTGACGGATGCCGAGC TTCATGCGAGCTGCA Swit_4076 4475201 - 4474983 - | hypothetical protein Swit_4077 4476050 - 4475562 - | glutathione peroxidase TERM 2316 4476079 - 4476100 + r 71 -10.9 -3.40403 | gap 1, overlap 4476071 TCATCATCCCCGCTT GCCG-GCATG CGG CATGCGCGGC TTCTCGTCGGGCGGG Swit_4078 4476594 - 4476067 - | MarR family transcriptional regulator Swit_4079 4476642 - 4477526 + | branched-chain amino acid aminotransferase TERM 2317 4477504 - 4477530 + T 75 -13.6 -3.01924 | ATGCCGATCTGGTGC GCGGGCGGCTGG CGG CCGGCTGACCGC TATTCGGGCAAGGTC Swit_4080 4478384 - 4477530 - | transporter DMT superfamily protein TERM 2318 4479811 - 4479782 - g 91 -14.9 -3.8211 | GCGCATCCACAAGAA CAGCCTCCCGGCG ACGG CGGCGGGCGGCTG AGCGAGGCGCCGACG Swit_4081 4478535 - 4479812 + | amidohydrolase TERM 2319 4481190 - 4481147 - g 77 -15.3 -3.21099 | gap 2, opp_overlap 4481171 CGCGCCGAGGAGGAA CGG-C-TGCTGGCCGACCGCG CGGA CGCGGCCGACCCGCAGGTCCG CCGGCTGCGGCTGGG Swit_4082 4479827 - 4482493 + | regulatory protein, LuxR TERM 2320 4484077 - 4484038 - g 72 -14.2 -3.17212 | gap 1, overlap 4484039 GGAGGAGGCGACCAA CGCCGCCGTCGCCGCGGGC GCG GCCCGCGACGA-GGTGGAA GTGATCGACATCCGC Swit_4083 4482620 - 4484173 + | hydantoinase/oxoprolinase TERM 2321 4485308 - 4485281 - g 72 -14.8 -2.87132 | gap 1 TGCCGCTCGCACAGA GCGCCGCCGCCGC GTC GCG-CGTCGGCGC CAAGGCGACGGCTTC Swit_4084 4484194 - 4485339 + | hypothetical protein TERM 2322 4485587 - 4485556 - g 82 -15.8 -3.28712 | gap 1 CGCCTTCGCGCAGAA GAGCG-CCGCCGCGG CGA CCGAGGCGGACGCCC AGGGCGACATCATCG Swit_4085 4485479 - 4487536 + | TonB-dependent receptor TERM 2323 4487555 - 4487580 + F 89 -14.7 -3.90291 | gap 1, overlap 4487559 ATGAGGCGATGGGGA GGGTGG-CGGCC GCC GGCCGGCCGCCC TTTCCTTAACGGGAT TERM 2324 4487559 - 4487579 + F 79 -15.4 -2.93853 | overlap 4487555 GGCGATGGGGAGGGT GGCGGCCG CCGGC CGGCCGCC CTTTCCTTAACGGGA Swit_4086 4487599 - 4488900 + | major facilitator transporter Swit_4087 4489685 - 4488897 - | hypothetical protein TERM 2325 4489742 - 4489710 - R 100 -27.1 -4.11216 | CTTCCATCCGGAAAA TCCCGGCCGGCGCCT TTC AGGCACCGGCCGGGA CGGGAAAGCAAGGCA Swit_4088 4492223 - 4489779 - | TonB-dependent receptor TERM 2326 4492392 - 4492377 - R 76 -6.2 -4.5954 | opp_overlap 4492391, overlap 4492391 TTATAGTAGATAAAA GAGTTT AGCT AAACTC AAGATATTGATTTTA TERM 2327 4492733 - 4492716 - R 71 -14.1 -2.52516 | opp_overlap 4492716, overlap 4492715 CGCTGGAGGATGAAG CCGCCGC CGAC GCGGCGG AGCAGGCCCGTCTCG Swit_4089 4493475 - 4492795 - | orotidine-5'-phosphate decarboxylase Swit_4090 4493780 - 4493472 - | hypothetical protein Swit_4091 4496155 - 4493831 - | patatin Swit_4092 4496398 - 4497765 + | DNA repair protein RadA Swit_4093 4497778 - 4498347 + | colicin V production protein Swit_4094 4498895 - 4498467 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2328 4498924 - 4498957 + H 72 -7.4 -4.1964 | opp_overlap 4498927, overlap 4498925 4498928 TGCCGCCATCCTAGA GCAGTCTGCGCGAT TTCCAT ATCGCGCAGATGGA TTTTGGCGTCTTGCG TERM 2329 4498928 - 4498953 + H 72 -13.4 -2.75845 | opp_overlap 4498927, overlap 4498925 4498924 GCCATCCTAGAGCAG TCTGCGCGAT TTCCAT ATCGCGCAGA TGGATTTTGGCGTCT Swit_4095 4499043 - 4500131 + | radical SAM domain-containing protein Swit_4096 4500434 - 4500985 + | hemerythrin HHE cation binding domain-containing protein TERM 2330 4501011 - 4501028 + T 77 -14.1 -3.27525 | overlap 4501004 CCTCAGGCGCCGGGC GGCCCGC ATCC GCGGGCC TTGGCTTTCGCGGGG Swit_4097 4501637 - 4501110 - | molybdenum cofactor biosynthesis protein B TERM 2331 4501740 - 4501758 + r 71 -8.8 -3.85698 | GACATGGATGCCAGC CTTCAGCC TTT GGCCGAAG TTTATCCCGAGCGCC Swit_4098 4503604 - 4501832 - | lytic transglycosylase, catalytic Swit_4099 4504386 - 4503601 - | uracil-DNA glycosylase superfamily protein TERM 2332 4505013 - 4504995 - g 73 -12.4 -3.41051 | CGAGGGCGAGCACAA GCCCGACT ACC AGCCGGGC ATGGAGCTGCACGCG TERM 2333 4505202 - 4505229 + G 74 -13.4 -3.32022 | gap 1 CCACACCCAGGGCTG GCCGCTCACCGAC GAG GTCGGCG-GCGGC TTCCTCTATCACCAG Swit_4100 4504489 - 4506138 + | electron-transferring-flavoprotein dehydrogenase TERM 2334 4506147 - 4506170 + F 100 -17.4 -4.4078 | CATGTGAGATCGATG CGGGCCGGGG GGAA CTCCGGCCCG TTTTCGTTGGGGAGG TERM 2335 4506218 - 4506206 - f 100 -4.7 -5.75342 | overlap 4506207 CGCGCGGAAAAAAAA TCGCG AGG CGCGT CACAGGCGGGCAGGG TERM 2336 4506217 - 4506207 - f 73 -8.2 -4.04482 | overlap 4506206 GCGCGGAAAAAAAAT CGCG AGG CGCG TCACAGGCGGGCAGG Swit_4101 4506274 - 4506705 + | alkylhydroperoxidase TERM 2337 4507216 - 4507180 - g 74 -15.1 -3.09492 | GCGCCAAGGCGAATA TCGACCAGGGCAAGGTG CGC CACCGGACCCCGGTCGA GACGCAGCAGCGGCT Swit_4102 4506708 - 4507586 + | ECF subfamily RNA polymerase sigma-24 factor Swit_4103 4507879 - 4508430 + | hypothetical protein Swit_4104 4509563 - 4508493 - | hypothetical protein Swit_4105 4510774 - 4509560 - | hypothetical protein TERM 2338 4511068 - 4511110 + r 74 -11.9 -3.53091 | gap 2, opp_overlap 4511067, overlap 4511094 AGCTTGCGCATCAAC GCGCGG-CGATC-GGCCGTCG CGT CGTCGGCCTGCTCGACCGAGC TTTCGGCCGACACGT Swit_4106 4512194 - 4511313 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2339 4512020 - 4511992 - G 84 -16 -3.53091 | gap 1 AGTGCCGGGGCGAAA GGCCCGGC-CAGC ATCA GCCGCGCCGGGCC GGGTTCGGCCGCGAC Swit_4107 4513979 - 4512321 - | TPR repeat-containing protein TERM 2340 4513543 - 4513490 - G 74 -12.9 -3.54307 | gap 1 AATAGGCGTTCGAAA GCTGCGAGCCGCCGGCCGGCGCGGCG AGC CGG-GCGGCGTCCGACGACTGGCGGC CATAGGCGACCCAGC Swit_4108 4514272 - 4514871 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 2341 4514941 - 4514997 + T 100 -12.7 -4.41241 | gap 4, opp_overlap 4514945 4514946, overlap 4514946 GAGGAGGGGCCAGGT CAAAC-CCTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAGGTGATTG TTTTATCGCGATTTC TERM 2342 4514992 - 4514945 - T 75 -12.3 -3.60098 | gap 3, opp_overlap 4514941 4514946, overlap 4514946 AGGGGCCAGGTCAAA CCCTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAGGT GATTGTTTTATCGCG TERM 2343 4514991 - 4514946 - T 78 -15.8 -2.75844 | gap 3, opp_overlap 4514941 4514946, overlap 4514945 GGGGCCAGGTCAAAC CCTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAGG TGATTGTTTTATCGC TERM 2344 4514946 - 4514991 + T 83 -15.8 -3.14625 | gap 3, opp_overlap 4514946 4514945, overlap 4514941 GGGGCCAGGTCAAAC CCTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAGG TGATTGTTTTATCGC Swit_4109 4515538 - 4515050 - | flavin reductase domain-containing protein Swit_4110 4515708 - 4515926 + | translation initiation factor 1 TERM 2345 4515939 - 4515927 - f 76 -10.5 -3.9122 | opp_overlap 4515927, overlap 4515928 TATCGCTTCAAATAA GGGGC GGG GCCCC TTGTCCCCGTCCGAC Swit_4111 4515940 - 4516581 + | maf protein TERM 2346 4517257 - 4517296 + G 77 -15 -3.15861 | gap 1 GATCGACGCGATCCT GCCGCAGCCGTTCG-AGCG GAC CGCGGTGAACGGCTTCGGC TTCCTCCAGATCGTC Swit_4112 4516574 - 4517575 + | hypothetical protein Swit_4113 4517559 - 4517714 + | hypothetical protein TERM 2347 4517752 - 4517726 - f 78 -6.4 -4.55016 | opp_overlap 4517743 ATAAAAAAGCGAAAA GCGGGCTGGACA GAA TGCGCGACCCGC CTCTATAGGCACGCC TERM 2348 4517944 - 4517993 + F 76 -10.9 -3.76952 | gap 4 TTCGGCACTGTTCGT CCGTGATCGCCTGTAGC-TGCCCCC AGAT GGGGGCATGCT-CGGG-GG-CACGG TTTGGCTTCCGTGGA TERM 2349 4518588 - 4518600 + F 70 -10.5 -3.64599 | overlap 4518595 CATGAGGACATCTCC GGCCG TGG CGGCC TTTCCGCTCTACTCC Swit_4116 4519295 - 4519912 + | CRP/FNR family transcriptional regulator TERM 2350 4520623 - 4520611 - g 75 -4.7 -4.57569 | opp_overlap 4520615, overlap 4520612 4520613 GCAGGCCGCCAAAAA TGGCG GGC CGCCG CTGCCCTTCAATCAT Swit_4117 4520279 - 4520728 + | metal-dependent amidase/aminoacylase/carboxypeptidase-like protein Swit_4118 4521733 - 4521419 - | hypothetical protein Swit_4119 4523049 - 4521844 - | lipid-transfer protein Swit_4120 4523690 - 4523046 - | glutathione S-transferase domain-containing protein Swit_4121 4525218 - 4523701 - | AMP-dependent synthetase and ligase Swit_4122 4525822 - 4525235 - | hypothetical protein Swit_4123 4525944 - 4526471 + | MarR family transcriptional regulator TERM 2351 4526983 - 4526964 - g 80 -16.4 -3.14211 | opp_overlap 4526961 4526968 ATCCTGCTCGACGAA GCGCGCGG CCGG CCGCGCGC GGGCATCTTCCTGCA TERM 2352 4528146 - 4528183 + G 78 -9.7 -4.15222 | gap 1 CCCGACGGACATGTC GCGTGGCGCGGCGATCGG CTG CCGGACGACG-GCGACGC TTTCTTCGACAGGAT Swit_4124 4526538 - 4528217 + | hypothetical protein TERM 2353 4528230 - 4528258 + F 71 -13.9 -2.67694 | overlap 4528216 4528239 4528245 4528248 TGAGCGGCATCCGGC CCATATCGGGCCG ACG CGGCTCTATATGG TAATATAGTGCTACT Swit_4125 4528314 - 4530569 + | TonB-dependent receptor Swit_4126 4530559 - 4531740 + | alpha/beta hydrolase fold Swit_4127 4532578 - 4531757 - | IclR family transcriptional regulator Swit_4128 4533040 - 4532618 - | hypothetical protein Swit_4129 4533191 - 4535494 + | TonB-dependent receptor TERM 2354 4535524 - 4535503 - f 91 -18.7 -3.10343 | opp_overlap 4535496 4535493 ATATTGATCAGCCAA CGCCGGGCC CGCG GGCCCGGCG CCAGAGGTCTTTCGA TERM 2355 4537289 - 4537337 + G 71 -10.7 -3.60098 | CCCAGGCCTGGAGCT TCCGCCGGCTTCCCGGCCCCCGC CTC GCCGGCAGCGAGGAGACGGCGGA TTTCAACTACGGCCT Swit_4130 4535539 - 4537659 + | hypothetical protein Swit_4131 4537656 - 4538096 + | cytochrome c, class I TERM 2356 4538678 - 4538621 - g 93 -17.1 -3.59262 | gap 2, overlap 4538622 CTGCACAGCGCCAAA TGGCGGCCCGATACCGACCTGCGCGAC AAGAGG GTCGCGCTGGTCGG-ATCGGGGT-CCA CCGCCGCCCAGATCA TERM 2357 4538680 - 4538622 - g 83 -20.5 -2.75343 | gap 3, overlap 4538621 TGCACAGCGCCAAAT GGCGG-CCC-GATACCGACCTGCGCGAC AAGAGG GTCGCGCTGGTCGG-ATCGGGGTCCACC GCCGCCCAGATCATC Swit_4132 4538099 - 4539595 + | FAD dependent oxidoreductase Swit_4133 4539644 - 4540357 + | dienelactone hydrolase Swit_4134 4540379 - 4541332 + | fumarylacetoacetate (FAA) hydrolase Swit_4136 4541636 - 4543399 + | AMP-dependent synthetase and ligase Swit_4137 4544537 - 4543614 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 2358 4544346 - 4544396 + g 86 -21.3 -2.70932 | gap 1, opp_overlap 4544344 4544345, overlap 4544348 4544363 GGCCGCCGCGAAACC GGCATTGCCGCCGGAG-GCGCAGA TGAA TCTGCGTATTCCGGCGGCAAAGTC TCGTTCGCAGCGAAG TERM 2359 4544348 - 4544394 + g 84 -20.3 -2.90075 | gap 1, opp_overlap 4544344 4544345, overlap 4544346 4544363 CCGCCGCGAAACCGG CATTGCCGCCGGAG-GCGCAGA TGAA TCTGCGTATTCCGGCGGCAAAG TCTCGTTCGCAGCGA Swit_4138 4546096 - 4544594 - | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 2360 4546416 - 4546426 + H 71 -5.4 -4.45083 | opp_overlap 4546422, overlap 4546411 TTCCGTAACGGGCGT TGAC AAC GTCA TTTTGTAAATATAAC Swit_4139 4546531 - 4547685 + | alanine racemase domain-containing protein TERM 2361 4548209 - 4548226 + G 83 -8.3 -4.57073 | CGGTCGAGATATTGC GCGGCCC GCAG GGGACGC TTTTTGGCCGCAATG Swit_4140 4547725 - 4549926 + | TonB-dependent receptor TERM 2362 4551033 - 4551046 + G 70 -3.7 -4.49556 | CGCCTGTCTGGCCAT GCCGC TATC GCTGC TTTATTTCGTGCCGA Swit_4141 4550062 - 4551390 + | major facilitator transporter TERM 2363 4552216 - 4552203 - g 76 -8.1 -4.25104 | GCTGCGCGAGGAAAA TGGCG TAAC CGCCA TCATCGGCGTGCTCG Swit_4142 4551514 - 4552515 + | LacI family transcription regulator TERM 2364 4552582 - 4552619 + F 71 -6.2 -4.30995 | GAACCGCGTGTGTTT GC-GCCGCGGCATCCCCG ATTT CGGGTA-GCCATGGCAGC TTGTTTTGTAGAACG TERM 2365 4554779 - 4554805 + G 74 -11.5 -3.78775 | GGTGGTGCCGCGCTC GGTGCTGGCCG AGACC CGGCCAGGGCC TTTGATCGTCGAGGA Swit_4143 4552797 - 4554905 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_4144 4554907 - 4556712 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_4145 4557027 - 4559240 + | TonB-dependent receptor Swit_4146 4559249 - 4559800 + | isochorismatase hydrolase Swit_4147 4561182 - 4560187 - | AraC family transcriptional regulator TERM 2366 4561200 - 4561210 + H 77 -2.6 -5.05601 | opp_overlap 4561197, overlap 4561201 4561203 CGCTCTCCATAAGTC TTAT GAC ATAA TTTTTCTATGTCATA TERM 2367 4561326 - 4561316 - H 72 -2.6 -4.74453 | opp_overlap 4561316 TAATATATTGAAAAA TAAT GAT ATTA TTTGAGGTTCGACAG Swit_4148 4561532 - 4562548 + | hypothetical protein TERM 2368 4562663 - 4562709 + G 72 -14.3 -3.21695 | CGTCGGTTATGGATC GGTCGGCAGCGAGGCGGCGCG CAGCT TGCGCCGGCTCTATCCCGACC TTCCCTTCGTGATCG Swit_4149 4562616 - 4563626 + | hypothetical protein Swit_4150 4563745 - 4564899 + | Rieske (2Fe-2S) domain-containing protein Swit_4151 4565168 - 4567462 + | TonB-dependent receptor Swit_4152 4567540 - 4567926 + | hypothetical protein Swit_4153 4567978 - 4568394 + | hypothetical protein TERM 2369 4569017 - 4569039 + G 72 -8.3 -4.04174 | GTCGAGCTGCTGCTG CTCGCGACG GTCGG CGGCGCGGG TTTCCTTCTGTCCCC Swit_4154 4568507 - 4569655 + | major facilitator transporter TERM 2370 4569708 - 4569739 + F 83 -12.2 -4.08692 | gap 1 CCACCTCGTGAAGCC GCACCCGCGACGCCA GCA TGGCGCC-CGGGCGC TTTTCCGGGAGGTTG TERM 2371 4570548 - 4570558 + G 78 -8.2 -4.25104 | overlap 4570547 GCAGGTGGTGCAGGG CGCC GGG GGCG TTTTGGTCCGCACCG TERM 2372 4570859 - 4570916 + G 77 -17 -2.62515 | gap 2, overlap 4570873 TGGAGGGCGCGATCG GCGTTCGTGACGGCGCGGCGC-G-GCTG GAGA CAGCGCTGCGCCGCTTCGTCCCGGAGGC TCGTCTGGCCGGCTT Swit_4155 4569757 - 4571154 + | amine oxidase (flavin-containing) Swit_4156 4571255 - 4572316 + | alkanal monooxygenase Swit_4157 4572371 - 4573084 + | dienelactone hydrolase TERM 2373 4574267 - 4574324 + G 73 -9.8 -3.85698 | gap 2, overlap 4574269 4574270 CCGTGATCCGCTTCG AACGCGACGAGGACGTGGTGGCGATGGC CAAT GCCA-CGCCATT-CGGCCTCGCCGCCTA TTTCTACGCGCGCGA TERM 2374 4574269 - 4574322 + G 73 -12.4 -3.51934 | gap 2, overlap 4574267 4574270 GTGATCCGCTTCGAA CGCGACGAGGACGTGGTGGCGATGGC CAAT GCCA-CGCCATT-CGGCCTCGCCGCC TATTTCTACGCGCGC TERM 2375 4574270 - 4574321 + G 74 -15.9 -2.70946 | gap 2, overlap 4574269 4574267 TGATCCGCTTCGAAC GCGACGAGGACGTGGTGGCGATGGC CAAT GCCA-CGCCATT-CGGCCTCGCCGC CTATTTCTACGCGCG Swit_4158 4573090 - 4574523 + | succinate semialdehyde dehydrogenase Swit_4159 4574660 - 4575556 + | NmrA family protein TERM 2376 4575606 - 4575572 - T 100 -18.6 -3.61398 | opp_overlap 4575576, overlap 4575576 CGCGCCGGCCAATAA GGAAGCCCGCCCGATC AAT GATCGGGCGGGCTTTT CGTATCCGCTGGGGG TERM 2377 4575576 - 4575602 + T 100 -23.8 -4.35116 | opp_overlap 4575572 4575576 CCGGCCAATAAGGAA GCCCGCCCGATC AAT GATCGGGCGGGC TTTTCGTATCCGCTG TERM 2378 4575602 - 4575576 - T 100 -23.8 -3.53444 | opp_overlap 4575576, overlap 4575572 CCGGCCAATAAGGAA GCCCGCCCGATC AAT GATCGGGCGGGC TTTTCGTATCCGCTG Swit_4160 4577711 - 4575639 - | Pyrrolo-quinoline quinone Swit_4161 4579242 - 4577797 - | FAD linked oxidase domain-containing protein TERM 2379 4579257 - 4579267 + H 73 -6.8 -4.30809 | overlap 4579244 4579243 TTTCGCGCGGGTGCG CCGA GTT TCGG TTTTGGTCGCTGTTA Swit_4162 4579374 - 4580159 + | hypothetical protein Swit_4163 4580162 - 4580845 + | glutathione S-transferase domain-containing protein Swit_4164 4580848 - 4581555 + | 3-oxoacid CoA-transferase, A subunit Swit_4165 4581552 - 4582187 + | butyryl-CoA:acetate CoA transferase Swit_4166 4583144 - 4582188 - | LysR family transcriptional regulator Swit_4167 4584490 - 4583186 - | 4-aminobutyrate aminotransferase TERM 2380 4584531 - 4584521 - R 84 -8.2 -4.50627 | overlap 4584522 GATGGAGGAAAGAAA GGCG TGT CGCC CGGGCTTGCTCCCGG Swit_4168 4585401 - 4584667 - | TetR family transcriptional regulator Swit_4169 4585554 - 4586993 + | amidase Swit_4170 4587853 - 4587191 - | TetR family transcriptional regulator Swit_4171 4589139 - 4587859 - | major facilitator transporter TERM 2381 4588011 - 4587993 - G 73 -10.3 -3.94002 | overlap 4588007 TATGATCGAAGGAAA GGGCCAT GAAAT ATGGCCC GGTCGCCGCTCCGAT Swit_4172 4590337 - 4589168 - | aminotransferase TERM 2382 4590555 - 4590536 - H 74 -5 -4.59342 | overlap 4590539 TTCACTAGAAATAAA TATTGGGA AAAT TCCCAGTA AATACATCAAGAATT Swit_4173 4590627 - 4592918 + | TonB-dependent receptor Swit_4174 4592953 - 4594275 + | Rieske (2Fe-2S) domain-containing protein Swit_4175 4594265 - 4594747 + | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_4176 4595201 - 4594908 - | hypothetical protein Swit_4177 4596450 - 4595461 - | helix-turn-helix domain-containing protein Swit_4178 4597906 - 4596845 - | Nitrilase TERM 2383 4599421 - 4599443 + G 70 -12 -3.32202 | opp_overlap 4599413, overlap 4599419 CCAGAGACAGCGGCC GGTTCCGATG GAT CGTCGGAGCC TATTATCTCAACATC Swit_4179 4598163 - 4600511 + | TonB-dependent receptor TERM 2384 4600946 - 4600901 - T 100 -15 -4.20868 | gap 3 GTGGTAAAACAAGAA GCTAGGGCGA--C-CGATCCGAT GCA ATCGGATCGTGAACCGCCCTAGC CCGCATTCCGGCAAG Swit_4180 4601921 - 4600902 - | 2-nitropropane dioxygenase, NPD TERM 2385 4602962 - 4602972 + GH 75 -5.4 -4.56597 | GTATCGAAAGCGTCG GGAT CAC ATCC TTTTTCGCGCCGCCG Swit_4181 4602208 - 4603776 + | acyl-CoA synthetase TERM 2386 4604310 - 4604334 + GF 73 -7.7 -4.13767 | overlap 4604295 4604294 GCGACCTCGATCGCG CCGTCGCCTTC TAT GAGCGCGTCGG TTTTGCGATCAGCGA Swit_4182 4603733 - 4604704 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_4183 4604710 - 4605549 + | alpha/beta hydrolase fold Swit_4184 4605665 - 4606831 + | acyl-CoA dehydrogenase type 2 Swit_4185 4606875 - 4607252 + | hypothetical protein Swit_4186 4607245 - 4607757 + | hypothetical protein Swit_4187 4607754 - 4608887 + | amidase Swit_4188 4608880 - 4610169 + | Rieske (2Fe-2S) domain-containing protein Swit_4189 4610184 - 4610666 + | aromatic-ring-hydroxylating dioxygenase, beta subunit Swit_4190 4610663 - 4611421 + | short-chain dehydrogenase/reductase SDR Swit_4191 4611506 - 4612516 + | AraC family transcriptional regulator TERM 2387 4612547 - 4612581 + T 73 -12.9 -3.14564 | gap 1, opp_overlap 4612517 CCGAAGCCGCCGGAG GGACG-GAGATCCGCG ATCA CGCGGATCTCCCGGTC TTCGTCAGGACGTCG Swit_4192 4613776 - 4612586 - | aromatic amino acid aminotransferase Swit_4193 4615050 - 4613806 - | hypothetical protein Swit_4194 4616288 - 4615068 - | amidohydrolase TERM 2388 4615952 - 4615914 - G 75 -10.3 -4.08557 | GCCGGGAAAGAAGAA GCG-CGGCCCGTCGATCAG GCC CTGTTCGA-GGGCGGTCGC CAGCGGCAGATCGCC Swit_4195 4617414 - 4616290 - | hypothetical protein Swit_4196 4619004 - 4617439 - | hydantoinase/oxoprolinase TERM 2389 4618179 - 4618147 - G 72 -13.4 -3.14132 | GCCCCGGGCGAGGAA GCCGATATCGGTGG TGGTG CCGCCGATGTCGGC GACGATCGCCTCGGT TERM 2390 4618720 - 4618708 - G 75 -9.1 -4.11216 | CGGCCAGCCCGAAAA TGGCG GAA CGCCA TCCCCCTTGGGCAAG TERM 2391 4618750 - 4618772 + g 74 -12.7 -3.64822 | gap 1 GGCGATGCGAATGGC GGCGACGGGC TCCA GCCCG-CGCC TTTCGATGAACGCGT TERM 2392 4618870 - 4618906 + g 78 -17.4 -2.70932 | CACCGTCCGCACCGC ATTCACCACGCCGGAT TTGAC GTCCGGCGTGGTGAAA TGCTTGGCGGAACCC Swit_4197 4621114 - 4619006 - | TonB-dependent receptor Swit_4198 4623289 - 4621250 - | formate dehydrogenase TERM 2393 4622180 - 4622237 + g 77 -15.5 -3.16683 | gap 1, overlap 4622183 4622186 4622186 CAGCGCGCCGCTCGG CATCTGGCCGGCGCGGCCCGGAAGGTCG GGG CGGCTTTTCGGGCCCGGCCGGGTGG-TG TTGGTCGGCTGCCAT TERM 2394 4622183 - 4622235 + g 86 -18.3 -3.14602 | overlap 4622180 4622186 4622186 CGCGCCGCTCGGCAT CTGGCCGGCGCGGCCCGGAAGGTCG GGG CGGCTTTTCGGGCCCGGCCGGGTGG TGTTGGTCGGCTGCC TERM 2395 4622186 - 4622232 + g 81 -18.6 -2.77701 | overlap 4622183 4622180 4622186 GCCGCTCGGCATCTG GCCGGCGCGGCCCGGAAGGTCG GGG CGGCTTTTCGGGCCCGGCCGGG TGGTGTTGGTCGGCT TERM 2396 4622186 - 4622214 + g 72 -9.4 -4.07568 | overlap 4622186 4622183 4622180 GCCGCTCGGCATCTG GCCGGCGCGGCC CGGAA GGTCGGGGCGGC TTTTCGGGCCCGGCC Swit_4199 4626016 - 4623449 - | regulatory protein, LuxR TERM 2397 4625461 - 4625481 + g 85 -11.1 -4.27062 | opp_overlap 4625445 CGGACGCCGTCACCG TGGCGCCGA GCA TCTGCGCCA TTTCATTTTCGTTGA Swit_4200 4626387 - 4627181 + | class II aldolase/adducin family protein Swit_4201 4627195 - 4628157 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Swit_4202 4628206 - 4629231 + | alcohol dehydrogenase TERM 2398 4629235 - 4629256 + T 71 -9.3 -3.77241 | overlap 4629196 GCTCTGCCCTGACCC GCCGCCGCG CCGT CGTGTCGGC TTTCCGTTCCGCTTT Swit_4203 4630284 - 4629418 - | LysR family transcriptional regulator TERM 2399 4630447 - 4630497 + G 76 -13.2 -3.4758 | gap 1, opp_overlap 4630478, overlap 4630448 GCCGTTCTGCCGGTC CACGGTCGCGGCG-CCGCCATCG CGGCAA CGACGGCGGACGTCGCGATCGCC TTCCTGTTCTTCCTC TERM 2400 4630448 - 4630496 + G 73 -16.7 -2.67825 | gap 1, opp_overlap 4630478, overlap 4630447 CCGTTCTGCCGGTCC ACGGTCGCGGCG-CCGCCATCG CGGCAA CGACGGCGGACGTCGCGATCGC CTTCCTGTTCTTCCT Swit_4204 4630366 - 4631358 + | bile acid:sodium symporter Swit_4205 4632556 - 4631408 - | AraC family transcriptional regulator TERM 2401 4632489 - 4632516 + g 82 -11.3 -4.24342 | CGGAGGTCATGGCCA GGATTGTCCGC GCCAAG GCGGGCGATCC TTTCTTCCTGCACCG TERM 2402 4633915 - 4633883 - g 74 -14.7 -3.02511 | opp_overlap 4633884 TCTATCCGGCGAACA CCGGCGTGGCCGTCG TCT CGACGGTCCCGGCGG TCAAGAAGACCGCGG Swit_4206 4632796 - 4635054 + | TonB-dependent receptor TERM 2403 4635543 - 4635526 - g 81 -12.7 -3.84266 | opp_overlap 4635512 ATAGCGCACAGGAAA GCCACGC ATGG GCGTGGC TGCGCGTCCGCGATC Swit_4207 4635111 - 4636148 + | putative esterase TERM 2404 4636572 - 4636582 + G 78 -8.2 -4.30719 | GAGGACCGGCTGATC CGGG CGC CCCG TTTCTTCTACGCCGG Swit_4208 4636272 - 4637447 + | amidohydrolase Swit_4209 4638137 - 4637649 - | glutathione-dependent formaldehyde-activating, GFA Swit_4210 4638404 - 4639288 + | LysR family transcriptional regulator Swit_4211 4639396 - 4640673 + | 4-aminobutyrate aminotransferase Swit_4212 4640670 - 4642139 + | succinate semialdehyde dehydrogenase Swit_4213 4642224 - 4642637 + | endoribonuclease L-PSP TERM 2405 4643004 - 4642950 - g 82 -17.1 -3.04144 | gap 1 GGCTCACCTTCAACA GCGTCGGCGGCTATGGCCA-GCCGCG CATC CGCGGCATCGGCACCACCGCCGACAC GCCGACCCTGGAGAA Swit_4214 4642649 - 4644829 + | TonB-dependent receptor Swit_4215 4644857 - 4645672 + | alpha/beta hydrolase fold Swit_4216 4645744 - 4646835 + | luciferase family protein Swit_4217 4647429 - 4646860 - | hypothetical protein Swit_4218 4648107 - 4647499 - | TetR family transcriptional regulator TERM 2406 4647934 - 4647958 + g 73 -9.9 -3.96068 | overlap 4647937 CTCGACGAGGTTCTC GTAGCAGGACC AGA GGACCTGCTCC TTGTTCTTGAAGTGG TERM 2407 4648124 - 4648148 + r 71 -5.8 -4.34263 | opp_overlap 4648126, overlap 4648115 GAACGCTCCATAAGG GACATGGATT TCGAC AATCCATCTC TTTCTATTCTTCAGG TERM 2408 4648168 - 4648195 + r 70 -12 -3.17763 | TATTCTTCAGGATTC CGCTCGGGCG GACGCCCG TGCCCGAGCG TTCATGCAATATCCC Swit_4219 4649004 - 4648279 - | major intrinsic protein Swit_4220 4650530 - 4649001 - | glycerol kinase glpD 4652059 - 4650527 - | glycerol-3-phosphate dehydrogenase Swit_4222 4652321 - 4652719 + | hypothetical protein Swit_4223 4652874 - 4654535 + | carboxylesterase, type B Swit_4224 4654532 - 4655458 + | gluconolactonase Swit_4225 4655588 - 4657354 + | 5-oxoprolinase (ATP-hydrolyzing) TERM 2409 4659054 - 4659090 + GF 70 -10.2 -3.53811 | gap 1 TGCGCACCGGCCGGA TCGCCGACCAGGCGC AGCTCGAC GCG-CTGGTCGCCGA TTTCCACGACATCCA Swit_4226 4657367 - 4659439 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_4227 4659411 - 4660241 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Swit_4228 4660255 - 4661058 + | short-chain dehydrogenase/reductase SDR Swit_4229 4661198 - 4662184 + | alpha/beta hydrolase fold Swit_4230 4662215 - 4663384 + | L-lactate dehydrogenase (cytochrome) Swit_4231 4663447 - 4665777 + | TonB-dependent receptor TERM 2410 4665851 - 4665793 - T 71 -13.8 -2.56432 | gap 2, opp_overlap 4665797, overlap 4665792 4665788 4665827 CGTAAGAGCAGGAAG CCGGTCCCTCGGCCTTCCGGTCCGGCGC GAAGA ACGCCGGGCCGGGAGGCCGAAG--CCTA TTGGGGCCGCTTCGG TERM 2411 4665797 - 4665849 + T 93 -20.5 -3.02461 | opp_overlap 4665792 4665788 4665793 4665827 AGAGCAGGAAGCCGG TCCCTCGGCCTTCCGGTCCGGCG CGAAGAA CGCCGGGCCGGGAGGCCGAAGCC TATTGGGGCCGCTTC Swit_4232 4666967 - 4665849 - | L-carnitine dehydratase/bile acid-inducible protein F Swit_4233 4668151 - 4666967 - | acyl-CoA dehydrogenase domain-containing protein Swit_4234 4668244 - 4669122 + | LysR family transcriptional regulator Swit_4235 4669887 - 4669129 - | alpha/beta hydrolase fold Swit_4236 4670651 - 4669884 - | alpha/beta hydrolase fold TERM 2412 4670852 - 4670901 + G 74 -11.1 -3.7829 | gap 1, opp_overlap 4670854, overlap 4670853 TGGACCGAGACCGGA AAGCCGGGCGTCCGG-CAGCGCGC GGT GCGCGCCGACCGCTCGACCGGCCA TTTCCTGGGTCTCAT TERM 2413 4670853 - 4670900 + G 72 -14.6 -2.86492 | gap 1, opp_overlap 4670854, overlap 4670852 GGACCGAGACCGGAA AGCCGGGCGTCCGG-CAGCGCGC GGT GCGCGCCGACCGCTCGACCGGCC ATTTCCTGGGTCTCA TERM 2414 4670899 - 4670854 - g 100 -20.3 -3.64103 | gap 1, opp_overlap 4670853 4670852 GACCGAGACCGGAAA GCCGGGCGTCCGG-CAGCGCGC GGT GCGCGCCGACCGCTCGACCGGC CATTTCCTGGGTCTC Swit_4237 4670720 - 4671556 + | anti-ECFsigma factor, ChrR TERM 2415 4671566 - 4671613 + T 74 -14.8 -2.62184 | gap 1 TTCTGAGCCCGGCTC AGGCG-GCTTCGCCGACCTTGCC GGG GGCGGCGTCGGCGAAGCGCGGCA TGATCTCCCGCGCGA Swit_4238 4672601 - 4671564 - | luciferase family protein Swit_4239 4673609 - 4672671 - | regulatory protein, LuxR TERM 2416 4673421 - 4673391 - G 72 -15.3 -2.87344 | GAGCTCCTCGACATA GGCGGCCGCGGCG TCGGC CGCCGTCGCCGCC GGGATCAGGCCCGTG Swit_4240 4673650 - 4673841 + | hypothetical protein TERM 2417 4673928 - 4673945 + F 74 -9.1 -3.85698 | gap 1 ATCTGGACGCCAGCG GCGC-GCC CAT GGCGGCGC TTTATGCGGACCGGC Swit_4241 4673936 - 4674931 + | luciferase family protein Swit_4242 4674921 - 4676570 + | glucose-methanol-choline oxidoreductase Swit_4243 4676567 - 4677934 + | major facilitator transporter Swit_4244 4677931 - 4678701 + | peptidase S15 Swit_4245 4678698 - 4679525 + | short-chain dehydrogenase/reductase SDR Swit_4246 4679542 - 4680285 + | class II aldolase/adducin family protein Swit_4247 4680421 - 4681284 + | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_4248 4681291 - 4682484 + | FMN-dependent alpha-hydroxy acid dehydrogenase Swit_4249 4682481 - 4682774 + | antibiotic biosynthesis monooxygenase Swit_4250 4682786 - 4683394 + | glutathione S-transferase domain-containing protein Swit_4251 4683407 - 4684453 + | FMN-dependent alpha-hydroxy acid dehydrogenase TERM 2418 4684461 - 4684519 + T 70 -10.3 -3.62096 | gap 1, opp_overlap 4684458, overlap 4684454 4684458 AGCGGTAACGGAGAT CGTCCCGATCTTCTCACGTCATTCCCGC TTTC GCGGGAATGACGAAAGAGGAA-GAGAGG TTTGGCCTGCTCCGG Swit_4252 4685570 - 4684536 - | 2OG-Fe(II) oxygenase Swit_4253 4687713 - 4685572 - | TonB-dependent receptor Swit_4254 4688135 - 4689166 + | AraC family transcriptional regulator TERM 2419 4689216 - 4689206 - f 76 -8.2 -4.13767 | opp_overlap 4689207, overlap 4689207 TCCCTTACCCGAAAA CGGC AGG GCCG CCCGGCGTCCTTCCG Swit_4255 4689313 - 4691205 + | Pyrrolo-quinoline quinone Swit_4256 4691262 - 4693271 + | beta-lactamase domain-containing protein Swit_4257 4693297 - 4695564 + | TonB-dependent receptor TERM 2420 4695582 - 4695610 + F 75 -11.6 -3.53811 | overlap 4695583 TTTCCCGTCTTCGGA ATGGCCCGGCTG GTCGG CGGCCGGGCCGC TTTCGGGCGGCTGCG TERM 2421 4695583 - 4695609 + F 78 -15.1 -2.72144 | overlap 4695582 TTCCCGTCTTCGGAA TGGCCCGGCTG GTCGG CGGCCGGGCCG CTTTCGGGCGGCTGC Swit_4258 4695740 - 4696846 + | gentisate 1 2-dioxygenase-like protein Swit_4259 4696875 - 4697660 + | acetoacetate decarboxylase Swit_4260 4698986 - 4697844 - | luciferase family protein TERM 2422 4699104 - 4699077 - g 82 -6.8 -4.81249 | opp_overlap 4699077, overlap 4699079 4699080 TCCGAAATGGAAAAA GAGGCCGCCCCG CGAG CGGCGCGACGCC GGCGAGAGGCTGCGA TERM 2423 4699165 - 4699145 - g 81 -2.4 -5.00884 | overlap 4699146 4699147 ATGGGCGCGAAAAAA TGCCGATC GGCCG GCGCGGCA TCGTCGGGCGGACGG Swit_4261 4699068 - 4700138 + | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Swit_4262 4700135 - 4701142 + | ornithine cyclodeaminase Swit_4263 4701163 - 4702263 + | gentisate 1 2-dioxygenase-like protein Swit_4264 4702288 - 4702839 + | hypothetical protein Swit_4265 4702919 - 4703857 + | LysR family transcriptional regulator Swit_4266 4705455 - 4703869 - | carboxylesterase, type B Swit_4267 4706140 - 4705475 - | hypothetical protein Swit_4268 4706306 - 4707694 + | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Swit_4269 4707708 - 4708763 + | vanillate monooxygenase Swit_4270 4709557 - 4708757 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 2424 4709272 - 4709315 + g 72 -13.2 -3.23853 | gap 1, overlap 4709270 CGGCCTGCGCCGCGC TCTCGATCATCGGGACGAGCA GGG TGCGCGCGCCGATG-TCGAGA TATTGCTTCACCAGC Swit_4271 4710360 - 4709554 - | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase Swit_4272 4711501 - 4710365 - | luciferase family protein TERM 2425 4711616 - 4711601 - H 87 -6 -5.22039 | CCGAAATGGAAAAAA CGTGGC CATT GCCTCG GGGAAAAGCTGATGG Swit_4273 4711828 - 4712880 + | vanillate monooxygenase TERM 2426 4713807 - 4713791 - g 74 -13.7 -3.36327 | opp_overlap 4713800, overlap 4713761 CGACGTCAGCGACAA GGACGCC TGG GGCGTCC GCGCCACGGTGGTGG TERM 2427 4714836 - 4714820 - g 70 -12.3 -3.30443 | opp_overlap 4714817 4714820 TTACGACTATACCAA CCTGCAG GTG CTGCAGG TCGTTGGTCCGGCGG Swit_4274 4713099 - 4715375 + | TonB-dependent receptor TERM 2428 4715358 - 4715381 + F 73 -13.2 -3.14132 | gap 1, overlap 4715376 ACCTTCGGCCTGGAA GCCCGCTACAG CTT CTG-AGCGGGC TTCGTCCCGGCGCCG TERM 2429 4715738 - 4715707 - g 72 -13.6 -3.14344 | gap 1, opp_overlap 4715700 CATCCCCGCGATCAA CGCCATCTCGCGCGC GGT GCGCGCG-GCGGGCG GGCTGAACGTCTTCG Swit_4275 4715516 - 4716199 + | isochorismatase hydrolase Swit_4276 4716321 - 4717250 + | LysR family transcriptional regulator Swit_4277 4718868 - 4717207 - | glucose-methanol-choline oxidoreductase Swit_4278 4719961 - 4718873 - | Rieske (2Fe-2S) domain-containing protein TERM 2430 4720176 - 4720200 + H 73 -7 -4.2828 | opp_overlap 4720176 4720189 TTGATGAGCGATGAA GACATCCCCG AAAGC CGGGGCGGTC TTTTCATCGATGACG Swit_4279 4720399 - 4721193 + | 2-hydroxy-3-oxopropionate reductase Swit_4280 4721208 - 4722479 + | Rieske (2Fe-2S) domain-containing protein Swit_4281 4722476 - 4723039 + | aromatic-ring-hydroxylating dioxygenase, beta subunit TERM 2431 4723014 - 4723027 + F 85 -3.1 -5.25772 | AGGCGACGTTGAACG CGAAG AATC TTTCG TTTTTCTTGTAATTT Swit_4282 4723081 - 4725300 + | TonB-dependent receptor, plug Swit_4283 4726020 - 4725352 - | GntR family transcriptional regulator Swit_4284 4726790 - 4726026 - | malonate/sodium symporter MadM subunit TERM 2432 4726562 - 4726599 + g 70 -12.5 -3.31461 | TCGCCCCGCCCATCA GGCCGATGCCGGCCAGC ACCG GCAGGTCGGCGACGCCC TTCTGGCCATGGGTC Swit_4285 4727209 - 4726787 - | malonate transporter MadL subunit Swit_4286 4727408 - 4729018 + | hypothetical protein Swit_4287 4729027 - 4729344 + | malonate decarboxylase subunit delta Swit_4288 4729341 - 4730249 + | malonate decarboxylase subunit beta TERM 2433 4730754 - 4730730 - g 85 -10.7 -4.25104 | overlap 4730731 4730741 CCTGCTGGAGGAAAA GGCGAAGACGA CCG CCGTCTTCGCG CCGGGGCTGGCCAAT TERM 2434 4730753 - 4730731 - g 72 -14.2 -3.14848 | overlap 4730730 4730741 CTGCTGGAGGAAAAG GCGAAGACGA CCG CCGTCTTCGC GCCGGGGCTGGCCAA Swit_4289 4730236 - 4730958 + | malonate decarboxylase gamma subunit Swit_4290 4730951 - 4731580 + | hypothetical protein Swit_4291 4731577 - 4732413 + | triphosphoribosyl-dephospho-CoA synthase TERM 2435 4732774 - 4732795 + G 82 -15.1 -3.48395 | CGATGGACGCCGCCA GCGGGGCCG ACGA CGGCCTCGC TTATGTGCGGGGGCT TERM 2436 4733246 - 4733224 - g 73 -10.4 -3.87815 | TCGGACCCGGACAAA GCCTCGCGAC GAT GGCGCGCGGC CAGTCGCGCTTCGAC Swit_4292 4732410 - 4733324 + | (acyl-carrier-protein) S-malonyltransferase-like protein Swit_4293 4734083 - 4733421 - | GntR family transcriptional regulator Swit_4294 4734201 - 4734959 + | Asp/Glu racemase Swit_4295 4734961 - 4736091 + | acyl-CoA dehydrogenase type 2 Swit_4296 4736586 - 4736101 - | MarR family transcriptional regulator Swit_4297 4736763 - 4737941 + | phthalate 4,5-dioxygenase Swit_4298 4737925 - 4739382 + | aldehyde dehydrogenase Swit_4299 4739379 - 4740500 + | aminotransferase Swit_4300 4740500 - 4742209 + | hypothetical protein Swit_4301 4742226 - 4743611 + | major facilitator transporter Swit_4302 4743824 - 4746052 + | TonB-dependent receptor TERM 2437 4746059 - 4746094 + F 72 -7.4 -4.12198 | overlap 4746063 4746066 GACTTCTAAGGCCCC CCCTGAAGGCCCGCCT CCCC AGGCGGGCCTTCTCCC TTTTCAGAGCTTGTG TERM 2438 4746063 - 4746090 + F 100 -21.4 -2.74784 | overlap 4746059 4746066 TCTAAGGCCCCCCCT GAAGGCCCGCCT CCCC AGGCGGGCCTTC TCCCTTTTCAGAGCT TERM 2439 4746066 - 4746087 + F 93 -17.3 -3.52113 | overlap 4746063 4746059 AAGGCCCCCCCTGAA GGCCCGCCT CCCC AGGCGGGCC TTCTCCCTTTTCAGA Swit_4303 4746119 - 4747429 + | amidohydrolase Swit_4304 4747443 - 4748855 + | amidohydrolase Swit_4305 4748948 - 4750450 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase Swit_4306 4750425 - 4751882 + | succinate semialdehyde dehydrogenase Swit_4307 4752352 - 4751894 - | MarR family transcriptional regulator Swit_4308 4752430 - 4753065 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Swit_4309 4753062 - 4753820 + | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit Swit_4310 4753817 - 4754143 + | hypothetical protein Swit_4311 4754145 - 4754963 + | extradiol ring-cleavage dioxygenase III subunit B Swit_4312 4754963 - 4755355 + | 5-carboxymethyl-2-hydroxymuconate isomerase Swit_4313 4755355 - 4756161 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase Swit_4314 4756158 - 4756913 + | 2-dehydro-3-deoxyglucarate aldolase Swit_4315 4757141 - 4757722 + | MarR family transcriptional regulator Swit_4316 4757756 - 4758214 + | MarR family transcriptional regulator TERM 2440 4758234 - 4758214 - f 81 -16.1 -2.77899 | opp_overlap 4758198, overlap 4758211 GGCGCGGAGGAACTA GGCCGCCCG CGC CGGACGGCC GTCCTCCGCTCAATA Swit_4317 4758318 - 4759484 + | acetylornithine deacetylase (ArgE) TERM 2441 4759595 - 4759580 - f 84 -2.6 -5.28176 | GGGATTGATAAAAAA GACTAA CGTG TTAATC TTTTGCTCGACTCGG Swit_4318 4759675 - 4762605 + | TonB-dependent receptor TERM 2442 4762809 - 4762768 - g 82 -15.8 -3.29144 | GCACGCGGCCGACAA GCCGGAGGTCGCCGC-GCCG AAGC CGGCGGCGGCG-CAGCCGGC GAACGGCGAGGACGG Swit_4319 4762685 - 4764259 + | peptidase S10, serine carboxypeptidase Swit_4320 4765179 - 4764256 - | LysR family transcriptional regulator Swit_4321 4765246 - 4766157 + | pirin domain-containing protein Swit_4322 4766925 - 4766167 - | GntR family transcriptional regulator Swit_4323 4767970 - 4767041 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Swit_4324 4768719 - 4767967 - | short-chain dehydrogenase/reductase SDR Swit_4325 4769569 - 4768712 - | 2,3-dimethylmalate lyase Swit_4326 4770198 - 4769566 - | 3-isopropylmalate dehydratase, small subunit Swit_4327 4771622 - 4770195 - | isopropylmalate isomerase large subunit TERM 2443 4770626 - 4770595 - G 73 -16.6 -2.50113 | overlap 4770594 CAGGAGCCGATGAAG GCGCCGGTGATCGG CAGG CCCATCACCGACGC GCCCGGCTCGATCTC Swit_4328 4772450 - 4771659 - | short-chain dehydrogenase/reductase SDR Swit_4329 4773824 - 4772451 - | major facilitator transporter TERM 2444 4773890 - 4773860 - R 74 -12.5 -3.28712 | opp_overlap 4773859 4773858 TTCCCTTCGTCAGAA GCGCAGGTTCGCC TGGAT GGCGATGCTGCGC GGTTCGTCGGTGCCG Swit_4330 4776196 - 4773854 - | TonB-dependent receptor Swit_4331 4776399 - 4777061 + | TetR family transcriptional regulator Swit_4332 4777159 - 4779498 + | TonB-dependent receptor Swit_4333 4779501 - 4779968 + | hypothetical protein Swit_4334 4779977 - 4781134 + | luciferase family protein Swit_4335 4781131 - 4781883 + | short-chain dehydrogenase/reductase SDR Swit_4336 4783104 - 4781896 - | beta-ketoadipyl CoA thiolase TERM 2445 4782558 - 4782508 - G 72 -13.4 -3.14132 | gap 3 CTCCTCGGCGAGGAA GCCGTTCGC-CTGCGCCGCCA-CGG CGCG CTGCTGGCTGCGCAGCGCGAA-GGC GTCCTGGTCGGCGCG Swit_4337 4783756 - 4783118 - | butyryl-CoA:acetate CoA transferase TERM 2446 4783516 - 4783550 + g 77 -15 -3.16564 | opp_overlap 4783511 GGTGGAAGAAGGCGC CGCCGGCCAGCAGC GTCACCG GTTGCTTGCCGGCG TTGATCAGCTCGGGG Swit_4338 4784447 - 4783770 - | 3-oxoacid CoA-transferase, A subunit TERM 2447 4784528 - 4784538 + H 78 -6.8 -4.61482 | opp_overlap 4784519, overlap 4784519 TAAAAGGATTATAGT CCGA TAA TCGG TTATTTTTTAGGGGC TERM 2448 4785288 - 4785328 + G 71 -11.9 -3.65046 | gap 3, opp_overlap 4785234 GGTCGCGCCTGCTGC CCGCGCTCCGGC-G-GGTCG CCAC CGACCTCAGCCGG-GCGGGG TTGTTCGGATAGCGC Swit_4339 4784558 - 4785340 + | beta-ketoadipate pathway transcription regulator Swit_4340 4785538 - 4785344 - | hypothetical protein Swit_4341 4787589 - 4785535 - | carbon starvation protein CstA Swit_4342 4787964 - 4788668 + | response regulator receiver protein TERM 2449 4789693 - 4789662 - g 82 -15.8 -3.27298 | GCCGGGAATTACGAA CGGACGCTGGAGAC CGTC GTCGCCGGCGTCCG GCTGCGCGTGCCGAT TERM 2450 4789967 - 4789919 - g 70 -15.1 -2.73364 | GCCGGACGGGAACCA GCCGATCGACGCCGCGATCGTCC GCC GGACGTTCGAGGCGCTGGCCGAC GAGGTCGCTGCCGCC TERM 2451 4790574 - 4790619 + G 74 -15.4 -3.01712 | gap 3, opp_overlap 4790566 4790567 CCTGAAACCGTCGCT GGCAGCGCCGCGCCGCCGC-CCG AGG CGGAGCGGCGGCA-GGCTC-GCC TGTTCGCGAACGGCG Swit_4343 4788747 - 4792367 + | 5-oxoprolinase (ATP-hydrolyzing) Swit_4344 4793827 - 4792397 - | GntR family transcriptional regulator TERM 2452 4793766 - 4793817 + g 83 -8.6 -4.62471 | gap 1 TCCATGAGGAACGAG GGGCTGGACCGGTCGAGCGGGATGT CGA GCCGCACGGTCGAT-GGTCCAGTCC TTTTTGCCAATTCCG TERM 2453 4793926 - 4793891 - H 70 -11.8 -3.1136 | opp_overlap 4793890, overlap 4793888 4793889 AAGCGGAAGAAACCA GTCCGTCCGGACCTGA TGTG CCCGGTCCGGACAGAA ATGCGCGCGGGAGGC Swit_4345 4793947 - 4794810 + | thiosulfate reductase cytochrome B subunit (membrane anchoring protein)-like protein Swit_4346 4794870 - 4795571 + | oxidoreductase, molybdopterin binding Swit_4347 4796569 - 4795646 - | AraC family transcriptional regulator TERM 2454 4796787 - 4796763 - H 81 -7.8 -4.43879 | gap 1 AGGATCGAACGAAAA GCCGACCGGCC CGAG AGCCGA-CGGC AGCGCGATCCGGAGG Swit_4348 4796851 - 4799118 + | TonB-dependent receptor Swit_4349 4799174 - 4800295 + | histone deacetylase superfamily protein Swit_4350 4800488 - 4802719 + | TonB-dependent receptor TERM 2455 4802721 - 4802761 + T 100 -18.9 -4.07568 | opp_overlap 4802726, overlap 4802725 4802726 CCCGCAGCCTGTAAG GAAAAGGCCCGGCCGCGTC GTT GGCGCGGCCGGGCCATTCA TTTTACGCCACCCCC TERM 2456 4802725 - 4802757 + T 100 -24.1 -3.66908 | opp_overlap 4802726, overlap 4802721 4802726 CAGCCTGTAAGGAAA AGGCCCGGCCGCGTC GTT GGCGCGGCCGGGCCA TTCATTTTACGCCAC TERM 2457 4802726 - 4802756 + T 100 -27.6 -2.79823 | opp_overlap 4802726, overlap 4802725 4802721 AGCCTGTAAGGAAAA GGCCCGGCCGCGTC GTT GGCGCGGCCGGGCC ATTCATTTTACGCCA TERM 2458 4802756 - 4802726 - T 100 -25.4 -4.41047 | opp_overlap 4802726 4802725 4802721 AGCCTGTAAGGAAAA GGCCCGGCCGCGTC GTT GGCGCGGCCGGGCC ATTCATTTTACGCCA Swit_4351 4803625 - 4802819 - | short-chain dehydrogenase/reductase SDR Swit_4352 4803782 - 4804921 + | major facilitator transporter Swit_4353 4804918 - 4806249 + | amino acid permease-associated region Swit_4354 4806239 - 4807522 + | aminotransferase Swit_4355 4807534 - 4808577 + | aminoglycoside phosphotransferase Swit_4356 4808574 - 4809206 + | TetR family transcriptional regulator Swit_4357 4809334 - 4810722 + | L-serine dehydratase 1 TERM 2459 4811620 - 4811604 - g 76 -7.9 -4.30719 | GGCTTCGAGAAGAAA TGGGCGC TGC GCGGCCA GCTCAAATGGACCGA TERM 2460 4812478 - 4812500 + G 70 -15.6 -2.70932 | TGATCTACGCGAACG TCTCGACCGG CTT CCGGTCGGGA TCGTTCAACGGCGAG Swit_4358 4810920 - 4813190 + | TonB-dependent receptor Swit_4359 4813199 - 4814104 + | regulatory protein, LuxR Swit_4360 4814193 - 4814552 + | hypothetical protein Swit_4361 4814557 - 4816818 + | hypothetical protein Swit_4362 4817517 - 4816831 - | TetR family transcriptional regulator TERM 2461 4817571 - 4817608 + H 78 -12.3 -3.72576 | gap 1 CAAGGCAAGGCATGA TTTTTGTCGCTTGACACA AGT TG-GTCAAGTGACAAAGA TTTGCTCAAGGCGCA Swit_4363 4817658 - 4818821 + | methylamine dehydrogenase heavy subunit TERM 2462 4819275 - 4819295 + G 71 -10.4 -3.74693 | gap 1 TCGCCCTCTATCTGG CCGCCGGCG AGCT CGCC-GCGG TTTCCTCCACTGGCA Swit_4364 4819117 - 4819917 + | methylamine dehydrogenase accessory protein MauD Swit_4365 4819944 - 4820501 + | amine dehydrogenase Swit_4366 4820498 - 4820968 + | cytochrome c, class I TERM 2463 4821368 - 4821348 - g 75 -10.3 -4.08692 | overlap 4821330 GAAGCTGCGGGAAAA GCCGCTCCG GAT CGAGGCGGC CGCGACGCGCGCGCG Swit_4367 4821004 - 4821453 + | hypothetical protein TERM 2464 4822049 - 4822031 - f 70 -12.4 -3.14881 | overlap 4822004 GAACGGCGCGATCAA CGTGCCGC TCG GCGACACG CTGGCGGCGCGCCTC TERM 2465 4823207 - 4823180 - f 73 -12.6 -3.17212 | overlap 4823165 CCAGCAGTTCATCAA CGTCAGCCCGGC CACC GCCGCGCAGACG CTGGTCAATGTCGAC TERM 2466 4823405 - 4823360 - f 91 -16.2 -3.61398 | gap 1 CCTGGGCGGCAACAA GCTGTCCAACGCGCCG-TCGC TGAGC GCGAACGGCGGGCTGGACATC ACCGTGATGGACAGC TERM 2467 4823737 - 4823704 - f 100 -21.7 -2.82234 | gap 1, opp_overlap 4823694, overlap 4823707 ATAAATTCTAGGAGA GGACCGGGCCGTCCGG CAT CCGGGCGGCCCGG-CC GAGGAGAGCATGATG TERM 2468 4823735 - 4823707 - f 100 -23.1 -2.66812 | opp_overlap 4823694, overlap 4823704 AATTCTAGGAGAGGA CCGGGCCGTCCGG CAT CCGGGCGGCCCGG CCGAGGAGAGCATGA Swit_4370 4823750 - 4825153 + | aldehyde dehydrogenase TERM 2469 4825523 - 4825472 - g 82 -19.4 -2.90723 | gap 1 TTATGGCCAAGGACA TCGCCTATCGCCACCAGGCCGCCGC CGC GCG-CTGCGTGGTGGCGAGCGGCGA GATGGCGGAGCGGGT Swit_4371 4825156 - 4826742 + | AMP-dependent synthetase and ligase Swit_4372 4826739 - 4828358 + | AMP-dependent synthetase and ligase Swit_4373 4828339 - 4828662 + | hypothetical protein Swit_4374 4828791 - 4829501 + | hypothetical protein Swit_4375 4829530 - 4829883 + | hypothetical protein Swit_4376 4829999 - 4830550 + | ATP-dependent protease peptidase subunit TERM 2470 4830700 - 4830666 - g 71 -10.7 -3.65046 | overlap 4830667 GGCCGACGCGAAGAA GGCCGTC-GCGGTCGCG CTG CGCAACCGCTGGCG-CC GGCAGCGGCTGCCCG hslU 4830589 - 4831890 + | ATP-dependent protease ATP-binding subunit Swit_4378 4831960 - 4832307 + | arsenate reductase and related Swit_4379 4833567 - 4832308 - | diguanylate cyclase TERM 2471 4833562 - 4833598 + g 82 -9.4 -4.41353 | gap 1, overlap 4833554 TGTACCGTGGCGATA GGCCATTGGTCGAAGCG CGGC CGCTTC-ACCTGCGGCC TTTTCCTGTCTATGC purT 4833638 - 4834825 + | phosphoribosylglycinamide formyltransferase 2 Swit_4381 4834822 - 4835205 + | endoribonuclease L-PSP Swit_4382 4835255 - 4836277 + | aldo/keto reductase Swit_4383 4836438 - 4836752 + | hypothetical protein TERM 2472 4836819 - 4836781 - f 80 -14.7 -3.14344 | gap 2, opp_overlap 4836781 4836812, overlap 4836795 GATGGCCTCCAGCAA GGCCGCCAGACGAAGGTCC TCC AG-CCTTC-CCTGGCGGCC TTTGCCGTTGGGGGG TERM 2473 4836781 - 4836819 + F 77 -13.2 -3.66178 | gap 1, opp_overlap 4836781 4836795, overlap 4836812 GATGGCCTCCAGCAA GGCCGCCAGACGAAGGT CCTCCA GCCTTCC-CTGGCGGCC TTTGCCGTTGGGGGG Swit_4384 4837124 - 4837918 + | hypothetical protein Swit_4385 4838332 - 4838685 + | hypothetical protein TERM 2474 4838814 - 4838829 + G 72 -4.7 -4.40561 | ACAATCCTGATCCTT TCTCC AGCCTG GGAGA TTATTTTTCGCCGGA Swit_4386 4838777 - 4839334 + | hypothetical protein Swit_4387 4839422 - 4839883 + | hypothetical protein TERM 2475 4839958 - 4840009 + T 100 -16.9 -4.17316 | gap 3, overlap 4839960 TGCTGATCGAGTCTC GAGCCTAGAGCGGTTCACGATCCGAT TGC ATCGGATCG-G--CCGCTCTAGGCTG TTGTTTTACCGCGAT TERM 2476 4839960 - 4840007 + T 100 -19.5 -3.68435 | gap 3, overlap 4839958 CTGATCGAGTCTCGA GCCTAGAGCGGTTCACGATCCGAT TGC ATCGGATCG-G--CCGCTCTAGGC TGTTGTTTTACCGCG Swit_4388 4840564 - 4840298 - | hypothetical protein Swit_4389 4840799 - 4841044 + | hypothetical protein TERM 2477 4841053 - 4841078 + T 100 -14 -5.41143 | overlap 4841046 CCGATAGGCTCGGCC TGCCCGCGGT TTCCCC GCCGCGGGCA TTTTTTTGCGCCATC TERM 2478 4841120 - 4841105 - T 73 -3.3 -4.81551 | CATCGATAGGAAAAA TCCTA GACATG TAGGA TCGGATGGATAGGAT Swit_4390 4842563 - 4841229 - | hypothetical protein Swit_4391 4842606 - 4843391 + | transglutaminase domain-containing protein Swit_4392 4843474 - 4845288 + | hypothetical protein TERM 2479 4845973 - 4845983 + G 75 -8.2 -4.13767 | overlap 4845956 CTATCGGCGGGTCGA CGCC GAA GGCG TTTTCGAGTCCGCGC Swit_4393 4845380 - 4846732 + | amidase Swit_4394 4846811 - 4847245 + | hypothetical protein Swit_4395 4847268 - 4848401 + | glucose sorbosone dehydrogenase TERM 2480 4848411 - 4848445 + T 83 -17.2 -2.54371 | overlap 4848400 GGCTGACGCCCGCTA GACTCGCTCCGGTTCA GGT TGAACCGGATCGAGGC TGCCTTCCCCTGGTT Swit_4396 4849294 - 4848509 - | GCN5-related N-acetyltransferase TERM 2481 4849427 - 4849403 - R 100 -18.5 -4.81851 | opp_overlap 4849403 ACTCAAAGGGAAAAA CCCGCCGGGCC GTG GTCCCGGCGGG TTCGTTCTCCTAAAA TERM 2482 4849403 - 4849427 + r 95 -18.5 -3.47322 | opp_overlap 4849403 ACTCAAAGGGAAAAA CCCGCCGGGCC GTG GTCCCGGCGGG TTCGTTCTCCTAAAA Swit_4397 4849812 - 4849528 - | hypothetical protein Swit_4398 4850203 - 4849820 - | response regulator receiver protein TERM 2483 4850166 - 4850144 - G 71 -9.9 -3.72324 | gap 1, overlap 4850141 CATGCGCACGAACAA CTCGTCCTCG ACGA CGAGGACG-G TCGCCTTGGCACGGG TERM 2484 4850680 - 4850638 - g 79 -14.9 -3.31144 | overlap 4850646 GGGCCAGGGCTACAA GGAGATGACCGCCGA-CGCCT GCA AGGCGGCCGGCGG-CACCACC ACCGAGCCCAAGAAG TERM 2485 4850673 - 4850646 - g 70 -15.6 -2.71763 | gap 1, overlap 4850638 GCTACAAGGAGATGA CCGCCGA-CGCCT GCA AGGCGGCCGGCGG CACCACCACCGAGCC Swit_4399 4850426 - 4850701 + | hypothetical protein Swit_4400 4850748 - 4851584 + | hypothetical protein Swit_4401 4851581 - 4852327 + | hypothetical protein Swit_4402 4853275 - 4852340 - | hypothetical protein Swit_4403 4853380 - 4854405 + | TrkA domain-containing protein Swit_4404 4854448 - 4854669 + | hypothetical protein Swit_4405 4856251 - 4854653 - | FAD dependent oxidoreductase TERM 2486 4856174 - 4856227 + g 70 -14.6 -2.70704 | gap 3, opp_overlap 4856157, overlap 4856173 4856194 4856217 GGCGGGCGCGATCCC CAGCCGCGCGACGATCGCGG-CG-GGC AGC GCCTCGGCCG-GATGGTCGAGCGGCAG CTTGATTTCGGAAAT Swit_4406 4856390 - 4856289 - | hypothetical protein Swit_4407 4856991 - 4856383 - | hypothetical protein Swit_4408 4858474 - 4857002 - | CHAD domain-containing protein TERM 2487 4857240 - 4857201 - G 77 -10.7 -3.90291 | gap 1, opp_overlap 4857211, overlap 4857236 4857238 AGTCGGTCAAGGAAA CGCTCCATCCGGCGGCGC GCCTT GCGTC-CAGGATAGAGCG ACACGAAGAATTCGC Swit_4409 4859800 - 4858541 - | peptidase M24 Swit_4410 4859823 - 4860788 + | proline iminopeptidase Swit_4411 4860785 - 4862197 + | amino acid permease-associated region Swit_4412 4862584 - 4862216 - | type IV pilus assembly PilZ Swit_4413 4863257 - 4862745 - | type IV pilus assembly PilZ TERM 2488 4864020 - 4863990 - g 74 -15.5 -3.02144 | gap 2 CGATGGGGTTCAACA CCGCGCGGACCGCCG GAC CGGCGGTC-G-GCGG CGCGGTCGTGGCGGC Swit_4414 4863512 - 4865185 + | protein of unknown function DUF894, DitE Swit_4415 4866104 - 4865292 - | IS4 family transposase Swit_4416 4867101 - 4866466 - | ABC transporter related Swit_4417 4867763 - 4867098 - | molybdate ABC transporter, inner membrane subunit Swit_4418 4868519 - 4867767 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Swit_4419 4868959 - 4868582 - | ModE family transcriptional regulator TERM 2489 4869223 - 4869203 - g 82 -16.9 -3.33261 | opp_overlap 4869218 GCGCAACGCGCACAA GCGCCATGC CGA GCATGGCGC CGCCGGCTTCCCGTC Swit_4420 4869090 - 4870064 + | Serine O-acetyltransferase Swit_4421 4870054 - 4870662 + | hypothetical protein Swit_4422 4870690 - 4871382 + | hypothetical protein Swit_4423 4871379 - 4871753 + | hypothetical protein Swit_4424 4871999 - 4872604 + | hypothetical protein TERM 2490 4872843 - 4872857 + F 100 -4.4 -5.39755 | GGCGTTGGTCATTAT TATTTT ACC AAAATA TTTTTTATGATTCTC Swit_4425 4873128 - 4874531 + | amino acid carrier protein Swit_4426 4876330 - 4874525 - | gamma-glutamyltransferase Swit_4427 4876467 - 4876709 + | hypothetical protein Swit_4428 4876988 - 4876722 - | Sel1 domain-containing protein Swit_4429 4877166 - 4877615 + | hypothetical protein Swit_4430 4879334 - 4877619 - | GAF sensor hybrid histidine kinase Swit_4431 4879508 - 4880002 + | NUDIX hydrolase Swit_4432 4881860 - 4879968 - | PAS/PAC sensor hybrid histidine kinase TERM 2491 4883618 - 4883604 - g 70 -8.5 -3.86194 | overlap 4883605 AAGCCGGGCGAGAAA GGCGC GCAGA GCGCC ACGCGCGACCGCATC Swit_4433 4882047 - 4884422 + | hydrolase TERM 2492 4884439 - 4884453 + F 78 -10 -4.07568 | opp_overlap 4884439 CGTCTGTCTGGAAAA TGCGGT TCC ACCGCA TTTTGCGGCACCGGC TERM 2493 4884453 - 4884439 - f 78 -10 -4.07568 | opp_overlap 4884439 CGTCTGTCTGGAAAA TGCGGT TCC ACCGCA TTTTGCGGCACCGGC TERM 2494 4884632 - 4884663 + F 86 -13.8 -3.84451 | gap 1, opp_overlap 4884622 4884632 ATAGACGGAAATCCA GAGTGGGAGAGCTGC GCG GCGGC-CTCTCACTC TTTGCATTTCAGGAC Swit_4434 4884771 - 4885076 + | hypothetical protein Swit_4435 4885109 - 4885408 + | hypothetical protein Swit_4436 4885350 - 4886027 + | bacteriophage terminase large (ATPase) subunit and inactivated derivatives-like protein TERM 2495 4886422 - 4886408 - g 76 -2.8 -4.80882 | opp_overlap 4886408 AGGGCACATCAAAAA TCGGAA TGG TTGCGA TAGTTCTGCCAATTC Swit_4437 4886095 - 4886817 + | hypothetical protein Swit_4438 4886880 - 4887257 + | hypothetical protein Swit_4439 4887262 - 4887507 + | hypothetical protein TERM 2496 4887644 - 4887658 + F 70 -7.8 -4.09739 | overlap 4887637 4887635 TCGTCAGAGCGATCC TGGGCG GAG CGCTCA TTTTCGGCGCATTCG TERM 2497 4888520 - 4888546 + G 75 -10.1 -4.07568 | CGCGGTGACGGCGCC GGCGGCGCG CGAGGTGAA CGCGCCGTC TTTTGGGACGGGAAG Swit_4440 4887744 - 4888574 + | hypothetical protein TERM 2498 4889275 - 4889303 + G 74 -11.6 -3.73068 | ATTGGGCACAGCCGT CACCGGCATCGG AGGGC CCGTTGCCGGAG TTCTTACGTTGGCCA Swit_4441 4888757 - 4889590 + | hypothetical protein Swit_4442 4889587 - 4889925 + | hypothetical protein Swit_4443 4890161 - 4892179 + | hypothetical protein Swit_4444 4892210 - 4893163 + | hypothetical protein TERM 2499 4893563 - 4893546 - f 72 -4.2 -4.56597 | opp_overlap 4893546 TCCCTTGTTTAAAAA TCTCTT TAAAAG AAGAGA TTTTTATGAAGATTT TERM 2500 4893546 - 4893563 + F 80 -4.9 -4.86033 | opp_overlap 4893546 TCCCTTGTTTAAAAA TCTCTTT AAAA GAAGAGA TTTTTATGAAGATTT Swit_4445 4894174 - 4894446 + | hypothetical protein Swit_4446 4895201 - 4895833 + | hypothetical protein TERM 2501 4895938 - 4895953 + F 83 -9 -4.37886 | opp_overlap 4895933 4895931, overlap 4895933 4895931 CCAACGAAGAGATCG CGGATC TGTT GATCCG TTTTGTCGAAGATAC TERM 2502 4897296 - 4897267 - g 81 -12.3 -3.89346 | gap 1, opp_overlap 4897269 CGGCTATTTCAGAAA TCGCGCAACACAGC AGC GCTAT-TTGCGCGA TCTAGGGCCACAAAT Swit_4447 4896488 - 4897537 + | hypothetical protein Swit_4448 4897537 - 4897941 + | hypothetical protein Swit_4449 4898007 - 4898318 + | hypothetical protein TERM 2503 4898533 - 4898494 - f 71 -8.7 -3.88097 | opp_overlap 4898500 4898502, overlap 4898495 GTATATAATCAATAA CGTCAATC-GGGATCGCCG CTTC CGGCCATCCCTGATTG-CA TCCGCCTATTCCCGC TERM 2504 4898609 - 4898589 - f 86 -13.9 -3.86776 | CAATGAACTATGAAA CGACGGCCG ATC CGGCCGGCG GCGACGACACGCGTC Swit_4450 4898737 - 4899711 + | hypothetical protein TERM 2505 4899823 - 4899809 - f 77 -4.4 -4.82901 | overlap 4899822 GCTTTTCCATAAAAA TATATA GAC TATATA CCATGGGCATTATTT TERM 2506 4900199 - 4900179 - g 73 -10.3 -3.86776 | TAATGAACTACGAAA CGACGGCCA ATC CGGCCGGCG GCGACGACACGCGTC Swit_4451 4900166 - 4901083 + | hypothetical protein Swit_4452 4901096 - 4902343 + | hypothetical protein TERM 2507 4902354 - 4902375 + F 93 -18.7 -3.27525 | overlap 4902370 CCTGATCCCTCCATG GGCCCCGGC TACG GCCGGGGCC TTCCCTTTCCAAGGA Swit_4453 4902398 - 4903786 + | hypothetical protein Swit_4454 4903861 - 4904673 + | IS4 family transposase TERM 2508 4904883 - 4904898 + G 81 -2.6 -5.05601 | overlap 4904885 4904895 GTTATGCATATCATT TGTCAT GGCC ATGATA TTTTTATCTATAATA Swit_4455 4904833 - 4905141 + | hypothetical protein TERM 2509 4905614 - 4905635 + G 100 -13.7 -5.14563 | TCCTCATCTCATCCG GGGCCGGTC TGGT GATCGGCCC TTTTTTCATGGAGGC Swit_4456 4905445 - 4906377 + | hypothetical protein Swit_4457 4906377 - 4907804 + | hypothetical protein Swit_4458 4907801 - 4908028 + | hypothetical protein Swit_4459 4908025 - 4908384 + | hypothetical protein Swit_4460 4908387 - 4909661 + | hypothetical protein TERM 2510 4909721 - 4909743 + F 100 -14.1 -5.27023 | CCATCTGTTTTTTTG GGGTCGCCG TTTAC CGGCGGCCC TTTTCTTTTTGGGAT Swit_4461 4909757 - 4910341 + | hypothetical protein Swit_4462 4910341 - 4910718 + | hypothetical protein Swit_4463 4910718 - 4911161 + | hypothetical protein Swit_4464 4911158 - 4911598 + | N-acetylmuramoyl-L-alanine amidase Swit_4465 4911762 - 4912229 + | hypothetical protein Swit_4466 4912226 - 4913491 + | hypothetical protein Swit_4467 4913488 - 4913787 + | hypothetical protein Swit_4468 4914042 - 4914800 + | hemolysin A Swit_4469 4914800 - 4915357 + | TspO and MBR like protein Swit_4470 4915390 - 4915650 + | hypothetical protein Swit_4471 4915747 - 4916259 + | hypothetical protein TERM 2511 4916629 - 4916642 + G 81 -9.5 -4.25056 | GGTATCGATTGGCGA GGGCG TGAC CGCCC TTTATTCATCGGATG Swit_4472 4916264 - 4917070 + | pyrroline-5-carboxylate reductase Swit_4473 4918089 - 4917067 - | glycosyl transferase family protein Swit_4474 4919487 - 4918189 - | adenylosuccinate lyase Swit_4475 4919788 - 4920339 + | hypothetical protein TERM 2512 4920366 - 4920387 + T 84 -10.8 -4.13767 | opp_overlap 4920366 AGCTGGAGGAGGAGA GGGGCGGC CGGTGA GCCGTCCC TTTTCAGATCAGCCC Swit_4476 4921083 - 4920391 - | DNA repair protein RadC Swit_4477 4922144 - 4921140 - | KpsF/GutQ family protein Swit_4478 4924036 - 4922156 - | hypothetical protein TERM 2513 4922356 - 4922342 - G 71 -11.4 -3.58726 | TTCCTGCAGATAGAA GGGCAG CGG CTGCCC ATCGGGTCCCATCTG Swit_4479 4924129 - 4927302 + | hypothetical protein Swit_4480 4927367 - 4927579 + | hypothetical protein Swit_4481 4927576 - 4927950 + | hypothetical protein TERM 2514 4928642 - 4928663 + F 71 -5.1 -4.43392 | gap 1 GTGTTGGGAGTCATC GTGGCG-GCG GTA TGCGCGCTAC TTGTTTTGATTTTGA Swit_4482 4929204 - 4929524 + | hypothetical protein TERM 2515 4929512 - 4929535 + F 86 -12.4 -4.13767 | ACGGATTTCTCAGGA GCGCCCGGAA TAGC TTCCGGACGC TTTTGGCATAAGCAG Swit_4483 4929564 - 4930349 + | F0F1 ATP synthase subunit A Swit_4484 4930396 - 4930623 + | H+-transporting two-sector ATPase, C subunit Swit_4485 4930686 - 4931177 + | H+-transporting two-sector ATPase, B/B' subunit Swit_4486 4931191 - 4931808 + | H+-transporting two-sector ATPase, B/B' subunit TERM 2516 4931801 - 4931852 + T 76 -7.5 -4.31397 | gap 3, overlap 4931798 4931802 4931804 CCTTGGGGAACGCCC GCTTCTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAGGTGA TTGTTTTATCGCGAT TERM 2517 4931804 - 4931849 + T 70 -12.2 -3.14625 | gap 3, overlap 4931802 4931801 4931798 TGGGGAACGCCCGCT TCTAGAGCGGTTCACGATCTGAT TGC ATCAGATCG-G--CCGCTCTAGG TGATTGTTTTATCGC Swit_4487 4932062 - 4931805 - | hypothetical protein TERM 2518 4931930 - 4931966 + g 100 -21.8 -3.54459 | gap 1, opp_overlap 4931930 4931931 4931936, overlap 4931931 4931936 GTCCGACCGGAAAGA C-GAAAAGGCCCGCCGA GCGA TCGGCGGGCCTTTTCTG TTTCGGCCGGGTTCG TERM 2519 4931965 - 4931930 - G 100 -22 -3.38046 | opp_overlap 4931930 4931931 4931936, overlap 4931931 4931936 GTCCGACCGGAAAGA CGAAAAGGCCCGCCGA GCGA TCGGCGGGCCTTTTCT GTTTCGGCCGGGTTC TERM 2520 4931964 - 4931931 - G 95 -25.5 -2.62613 | opp_overlap 4931931 4931930 4931936, overlap 4931930 4931936 TCCGACCGGAAAGAC GAAAAGGCCCGCCGA GCGA TCGGCGGGCCTTTTC TGTTTCGGCCGGGTT TERM 2521 4931931 - 4931964 + g 100 -25.5 -3.34894 | opp_overlap 4931930 4931931 4931936, overlap 4931930 4931936 TCCGACCGGAAAGAC GAAAAGGCCCGCCGA GCGA TCGGCGGGCCTTTTC TGTTTCGGCCGGGTT TERM 2522 4931936 - 4931959 + g 100 -19.6 -4.78848 | opp_overlap 4931931 4931930 4931936, overlap 4931931 4931930 CCGGAAAGACGAAAA GGCCCGCCGA GCGA TCGGCGGGCC TTTTCTGTTTCGGCC TERM 2523 4931959 - 4931936 - G 100 -19.6 -4.49756 | opp_overlap 4931936 4931931 4931930, overlap 4931931 4931930 CCGGAAAGACGAAAA GGCCCGCCGA GCGA TCGGCGGGCC TTTTCTGTTTCGGCC Swit_4488 4932878 - 4932138 - | protein of unknown function DUF899, thioredoxin family protein Swit_4489 4932945 - 4933385 + | MarR family transcriptional regulator Swit_4490 4933441 - 4933704 + | hypothetical protein uvrC 4933770 - 4935698 + | excinuclease ABC subunit C Swit_4492 4935698 - 4936663 + | polysaccharide deacetylase Swit_4493 4936713 - 4937444 + | DNA repair protein RecO TERM 2524 4938496 - 4938481 - g 72 -8.2 -4.07885 | CACCGCGCTCGAAAA GGGCGC GCGC ACGCCC GACCTTGGCGGCAAG Swit_4494 4937516 - 4938556 + | 3-isopropylmalate dehydrogenase Swit_4495 4939306 - 4938569 - | LytTR family two component transcriptional regulator Swit_4496 4941056 - 4939296 - | signal transduction histidine kinase, LytS Swit_4497 4941226 - 4941483 + | hypothetical protein TERM 2525 4941506 - 4941533 + F 100 -24.2 -4.27117 | TCGGGCGATCGTTCG GGCGCGCGGCGA GGTT TCGCCGCGCGCC TTTCTATTGTGACGC Swit_4498 4941734 - 4942282 + | hypothetical protein TERM 2526 4942291 - 4942331 + TF 100 -18.4 -4.21194 | gap 1, opp_overlap 4942259 4942258 GAACTGACCGATCCG TCGTTCCGGC-GGGCGGCT TCGG GGCTGCCCCGCCGGAATGA TTTTACATCCTCGCG TERM 2527 4942558 - 4942503 - gT 70 -7.5 -4.08216 | gap 2, opp_overlap 4942533 CCATCGGGTCGAAAA GCCGTGGGGCCGGCATGATCTCGCG CCGCTGTT CCCG-GATCA-GCCGGCCGACCGGC CGGCGGTGGGGGAAA Swit_4500 4944068 - 4943265 - | NUDIX hydrolase Swit_4499 4942465 - 4943349 + | phosphomannose isomerase-like protein Swit_4501 4944814 - 4944065 - | methyltransferase type 11 Swit_4502 4945545 - 4944811 - | 3-demethylubiquinone-9 3-methyltransferase TERM 2528 4946590 - 4946536 - g 77 -11.3 -3.84406 | gap 1, opp_overlap 4946572, overlap 4946533 CGCCTATGACAAGAA CGAGACGAAGGTCACGCTGACCGCCG TTCC CGACCGTCCGGGCG-CCGTCGCCTCG ATCTTCGCGCCGCTC Swit_4503 4945730 - 4946986 + | aspartate kinase Swit_4504 4946986 - 4948002 + | 2-nitropropane dioxygenase, NPD Swit_4505 4948101 - 4950380 + | phosphoenolpyruvate-protein phosphotransferase PtsP Swit_4506 4950495 - 4951427 + | hypothetical protein TERM 2529 4951902 - 4951863 - g 86 -18.4 -3.17075 | opp_overlap 4951857, overlap 4951865 CGTGCTCGAAGGCAA GACGCCGCCGGCCCCGGC CGGC GCGGCGGCCGGCGGCAAC CTCCCCTATGTCGTC TERM 2530 4951900 - 4951865 - g 90 -19.6 -3.14878 | opp_overlap 4951857, overlap 4951863 TGCTCGAAGGCAAGA CGCCGCCGGCCCCGGC CGGC GCGGCGGCCGGCGGCA ACCTCCCCTATGTCG Swit_4507 4951486 - 4952394 + | hypothetical protein TERM 2531 4952498 - 4952516 + F 83 -13.2 -3.85698 | overlap 4952492 GACATGGATGCCTGC CTTCAGCC TTT GGCTGAAG TTTATCCCGAGCGCC Swit_4508 4952559 - 4953518 + | tRNA(Ile)-lysidine synthetase TERM 2532 4953515 - 4953501 - f 91 -9.2 -4.66163 | opp_overlap 4953491, overlap 4953503 ATCTCGATCGAAAAA GCGCCG CCG CGACGC TGATCGCGGGGAGCC TERM 2533 4954277 - 4954246 - g 74 -14.5 -3.04144 | gap 2, opp_overlap 4954239 4954238 CCGGCACCGGCAAGA CGCTGCTCGCCCGCG CCAT CGCGGGCGAG--GCG AACGTGCCCTTCTTC TERM 2534 4954673 - 4954715 + G 70 -12.6 -3.28791 | gap 1, opp_overlap 4954661 4954662 GAAGGTGCCGCTGGC GCCCGACGTCAACGCGCGC ACCATC GCGCGCGGC-ACGCCGGGC TTCTCGGGCGCCGAT Swit_4509 4953612 - 4955570 + | membrane protease FtsH catalytic subunit TERM 2535 4955595 - 4955619 + T 100 -12.8 -5.20333 | opp_overlap 4955595 CCATGGCATAGGAAA GGCCGTGTCC CGCAA GGGCGCGGCC TTTTTCTTATCCATC TERM 2536 4955619 - 4955595 - T 74 -9.2 -3.83998 | gap 1, opp_overlap 4955595 CCATGGCATAGGAAA GGCCGTGTCCC GCAA GGG-CGCGGCC TTTTTCTTATCCATC Swit_4510 4956523 - 4956071 - | MarR family transcriptional regulator Swit_4511 4956571 - 4957764 + | secretion protein HlyD family protein Swit_4512 4957761 - 4959332 + | EmrB/QacA family drug resistance transporter Swit_4513 4959341 - 4960783 + | RND efflux system outer membrane lipoprotein TERM 2537 4960947 - 4960998 + G 91 -20.3 -3.36273 | gap 3 GGCGTGTGATGGCGA GGCGGTGC-CGGCA-CGGT-CGACGG ACG CCGTCGCGCCGTTGCCGCGCGTCGCC TTCCTGTTCAACGCC Swit_4514 4960876 - 4962120 + | hypothetical protein Swit_4515 4962146 - 4962646 + | hypothetical protein Swit_4516 4962677 - 4963354 + | two component transcriptional regulator Swit_4517 4963351 - 4964697 + | integral membrane sensor signal transduction histidine kinase Swit_4518 4966356 - 4964704 - | glucose-methanol-choline oxidoreductase TERM 2538 4965738 - 4965709 - G 80 -16.3 -3.14344 | opp_overlap 4965705 CACCGGCTTCAGGAA GGCGCCCGCCGCG CTGA CCCGGCGGCCGCC GCGCTGGTTGACGTG Swit_4519 4966459 - 4967235 + | methyltransferase-like protein Swit_4520 4967312 - 4967878 + | LemA family protein TERM 2539 4968173 - 4968206 + G 79 -15.3 -3.34043 | gap 1, opp_overlap 4968156 4968153 GCGTCTCGTTCGACG TGCTCGCGGTCAGCCG CGA CGGCCGGCC-CGAGCA TTATGAGCTGATCGA TERM 2540 4969658 - 4969612 - g 81 -12 -3.85698 | opp_overlap 4969619 4969623 4969634 CGCTGGGCCGACAAA TTCGCGGCGGTGCTGGCGGCGG CCG CCGCCGCCGGGACGGTGGCGCA CACCGCGAGCTGGTA Swit_4521 4967881 - 4969851 + | membrane-like protein TERM 2541 4970164 - 4970117 - T 78 -6.5 -4.66537 | gap 3, overlap 4970119 CGCGGTAAGACAAAA GCTTAGAGCGG--C-CGAGCTGAT GCA ATCAGATCGTGAACCGCTCTAATC AGCGCAGGCCGAGGA Swit_4522 4971197 - 4970163 - | acyltransferase 3 TERM 2542 4970840 - 4970793 - G 72 -13.2 -3.16203 | gap 1, overlap 4970791 GTAGGAGAAGACATA GGCGTGGAGCAGCCCCAGCGCCG CCT CGGC-CGGGGGCTGCGGCGCGCG GGCCAGCGCGGCCAG Swit_4523 4972204 - 4971194 - | glycosyl transferase family protein Swit_4524 4973322 - 4972201 - | hypothetical protein TERM 2543 4972748 - 4972804 + g 78 -12.9 -3.78934 | gap 3, opp_overlap 4972732, overlap 4972748 4972752 CCGATCGTCCAGGGC GG-GCCGGGG-TCG-CGGCGCAGCGCCG GCCG CGCCGCCGGGCCGGCGATCCCCAGCACC TTGTTCTCGACCAGC Swit_4525 4973481 - 4974494 + | glycosyl transferase family protein TERM 2544 4974539 - 4974513 - T 81 -13.6 -3.54129 | overlap 4974514 GAGACCCTTTTCAAA TCCTCCCTGCGC GAA GCGCGGGGAGGG GAACCACCCGCAGGG TERM 2545 4974538 - 4974514 - T 84 -17.1 -2.72263 | overlap 4974513 AGACCCTTTTCAAAT CCTCCCTGCGC GAA GCGCGGGGAGG GGAACCACCCGCAGG TERM 2546 4974620 - 4974645 + T 88 -14.7 -3.76224 | overlap 4974621 CGCCTTCGGCGGTCC CCCTCCCCGAG CAAG CTCGGGGAGGA TTTAGTGCATCAAGC TERM 2547 4974621 - 4974644 + T 90 -18.2 -2.8552 | overlap 4974620 GCCTTCGGCGGTCCC CCTCCCCGAG CAAG CTCGGGGAGG ATTTAGTGCATCAAG Swit_4526 4975914 - 4974655 - | glycosyl transferase family protein Swit_4527 4976162 - 4977706 + | polysaccharide biosynthesis protein Swit_4528 4977756 - 4979888 + | non-specific protein-tyrosine kinase Swit_4529 4979924 - 4981186 + | hypothetical protein Swit_4530 4982510 - 4981176 - | O-antigen polymerase TERM 2548 4981246 - 4981303 + g 74 -16.3 -2.78384 | gap 3, overlap 4981249 AGGCGATCGGGGCGA TGGCCGCGC-GCCAGCCAGCCGGCGCTG ACGAC CAGC-CCGGC-GGCGAGCAGCGCGGTCG TATAGTGGAACGGGC TERM 2549 4981249 - 4981300 + g 73 -16.6 -2.66316 | gap 3, overlap 4981246 CGATCGGGGCGATGG CCGCGC-GCCAGCCAGCCGGCGCTG ACGAC CAGC-CCGGC-GGCGAGCAGCGCGG TCGTATAGTGGAACG TERM 2550 4982160 - 4982126 - G 72 -14.3 -3.15574 | overlap 4982101 4982124 CGAAGGCGAGGAACA CGCCGCGCATCG-CCGC CTT GCGGTCGA-GCCCGGCG CCGACGATGCAGCCG Swit_4531 4983144 - 4982518 - | polysaccharide export protein Swit_4532 4984702 - 4983185 - | sugar transferase TERM 2551 4984043 - 4984065 + g 71 -11.3 -3.57792 | gap 1, overlap 4984042 CTTGATCCGGTCGGG CGCGGCGACG GCGA CGTCGC-GCG TTTCCCCATAGATGC Swit_4533 4985053 - 4985973 + | glycoside hydrolase family protein Swit_4534 4987315 - 4985960 - | UDP-glucose 6-dehydrogenase Swit_4535 4989588 - 4987306 - | glycosyl transferase family protein TERM 2552 4987427 - 4987409 - G 75 -4.5 -4.56597 | GCGTCGCCGGAAAAA TGGACTC GCGCG GTGTCCA GGGCCTTGGCCGCGA TERM 2553 4989609 - 4989631 + H 75 -14.8 -2.78384 | ACCCGGTGATCCAGT CCCGGCCGCA CGA TGCGGCCGGC TATCGTCCCCCGGCG TERM 2554 4990018 - 4989991 - g 71 -10.6 -3.67792 | gap 1 TCACAGCCAGCGAAA CGGAGCCGCGC TTTTCCG GCGCGG-TCCG CGTGCTGCTCGGCAT Swit_4536 4989828 - 4990106 + | hypothetical protein Swit_4537 4990902 - 4990108 - | metallophosphoesterase Swit_4538 4991675 - 4990899 - | hypothetical protein TERM 2555 4992992 - 4993034 + G 74 -14.2 -3.37245 | gap 3, opp_overlap 4992983 4992980 CAACCAGGACGCGTC GGCGCGGATCGGCCGGCTCGC CGCT GCG-GCGGGC-G-TCCGCGCC TTCGTCTTCGCGTCG Swit_4539 4992690 - 4993760 + | NAD-dependent epimerase/dehydratase Swit_4540 4993778 - 4994551 + | glucose-1-phosphate cytidylyltransferase Swit_4541 4994573 - 4995898 + | SAF domain-containing protein Swit_4542 4995909 - 4996457 + | dTDP-4-dehydrorhamnose 3,5-epimerase Swit_4543 4997485 - 4996487 - | glycosyl transferase family protein Swit_4544 4997595 - 4998713 + | FAD dependent oxidoreductase Swit_4545 4998893 - 4999900 + | phosphoribosyltransferase TERM 2556 5000296 - 5000276 - f 76 -7.7 -4.38171 | opp_overlap 5000275 5000278 GATATGATATCAAAA TACTCAACA TTG TATTGAGTA GTATCTCGAAAATAT TERM 2557 5000458 - 5000494 + F 100 -16.6 -4.30014 | AACAGTCTTCCGGTC GACCGGTCATGGGGGC GGCTG GCCTGCATGGCCGGTC TTTTGCGTTCATGGG Swit_4546 5000518 - 5000658 + | hypothetical protein TERM 2558 5000666 - 5000715 + F 91 -16.6 -3.63895 | opp_overlap 5000675 5000676, overlap 5000676 5000677 TTTCCTGATCGGAGA CGTGACGAACTGG-CCAACTGCGG GACA CCGCAGTTGGCCCTCTTCGTC-CG TTTCCCGTCCTTGAA TERM 2559 5000706 - 5000675 - f 80 -14.4 -3.17763 | opp_overlap 5000666 5000676 5000677, overlap 5000676 CGGAGACGTGACGAA CTGGCCAACTGCGG GACA CCGCAGTTGGCCCT CTTCGTCCGTTTCCC TERM 2560 5000676 - 5000705 + F 91 -17.9 -3.18776 | opp_overlap 5000675 5000676, overlap 5000666 5000677 GGAGACGTGACGAAC TGGCCAACTGCGG GACA CCGCAGTTGGCCC TCTTCGTCCGTTTCC TERM 2561 5000705 - 5000676 - f 86 -17.9 -2.50443 | opp_overlap 5000676 5000666 5000677, overlap 5000675 GGAGACGTGACGAAC TGGCCAACTGCGG GACA CCGCAGTTGGCCC TCTTCGTCCGTTTCC TERM 2562 5000677 - 5000704 + F 100 -21.4 -2.50784 | opp_overlap 5000676 5000675, overlap 5000676 5000666 GAGACGTGACGAACT GGCCAACTGCGG GACA CCGCAGTTGGCC CTCTTCGTCCGTTTC Swit_4547 5000749 - 5001042 + | hypothetical protein Swit_4548 5001085 - 5003340 + | asparagine synthase Swit_4549 5003337 - 5004308 + | Hpr(Ser) kinase/phosphatase TERM 2563 5005386 - 5005358 - g 70 -12.3 -3.31144 | GGCCGATCGCGAGAA GGACGAGGGCGCG GAT CTCGCCGCCGTCC CGCCGTTGCGGCACG Swit_4550 5004342 - 5006153 + | ABC transporter related Swit_4551 5006182 - 5007312 + | hypothetical protein TERM 2564 5009454 - 5009490 + G 100 -20.9 -3.82665 | opp_overlap 5009452 ATTCGGCGATCAACC TCGGCGCGGTCGATCCG GCC TGGATCGGCAGCGCCGA TTTCGTGGTGTGATC Swit_4552 5007443 - 5009503 + | glycoside hydrolase family protein Swit_4553 5011476 - 5009650 - | D-fructose-6-phosphate amidotransferase Swit_4554 5013062 - 5011704 - | UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase Swit_4555 5013125 - 5014510 + | phosphoglycolate phosphatase TERM 2565 5014561 - 5014516 - T 80 -16.3 -2.62933 | opp_overlap 5014505 5014531, overlap 5014518 5014531 5014555 5014557 CAAGCCCTGAGATCA GAGTCTGTTTGGAAATGCGCC GACA GGCGCATTTCCAAAGACGCTC AGCGGCGCCAGGCGA TERM 2566 5014557 - 5014518 - T 74 -13.9 -2.8547 | gap 2, opp_overlap 5014531, overlap 5014516 5014531 5014555 AGCCCTGAGATCAGA GTCTGTTTGGAAATGCGCC GACA GGCGCATTTCCAAA--GAC GCTCAGCGGCGCCAG Swit_4556 5015321 - 5014560 - | methyltransferase type 11 TERM 2567 5015946 - 5015997 + G 71 -10.7 -3.5594 | gap 1, overlap 5015981 CCGCGGTCGACCCGG CGGGGATC-GACCTGCCGGCGGCG CTCGC CGCCGCCGCCATGTCGGAACGCAG TTTCCGCCGTGCCTT Swit_4557 5015411 - 5016235 + | AraC family transcriptional regulator Swit_4558 5016982 - 5016239 - | hypothetical protein Swit_4559 5018373 - 5016982 - | cytochrome P450 Swit_4560 5019511 - 5018366 - | hypothetical protein Swit_4561 5019532 - 5019816 + | hypothetical protein TERM 2568 5019919 - 5019959 + F 70 -10.4 -3.66288 | opp_overlap 5019899 5019897 CCCAGCCTTCGCTGG GGTGACGGGTA-GCGAGGGG CAG CCCC-CGCCTGCCTGACGCC TTCTCTTCGCAGATG Swit_4562 5020121 - 5020231 + | hypothetical protein Swit_4563 5023068 - 5020258 - | DNA gyrase subunit A TERM 2569 5023185 - 5023171 - R 78 -10 -4.07568 | opp_overlap 5023171 TGCCTGTTTGGAAAA TGCGGT TTC ACCGCA TTTTGCGGCACCGGC TERM 2570 5023171 - 5023185 + r 78 -10 -4.07568 | opp_overlap 5023171 TGCCTGTTTGGAAAA TGCGGT TTC ACCGCA TTTTGCGGCACCGGC Swit_4564 5023482 - 5023309 - | hypothetical protein Swit_4565 5024311 - 5023550 - | hypothetical protein Swit_4566 5024511 - 5025782 + | hypothetical protein TERM 2571 5025798 - 5025837 + T 100 -26.6 -3.26471 | gap 1, opp_overlap 5025804, overlap 5025804 GCCCATTCGGCATCA CGGAAAGGGCCCGGACGCC ATC GGCG-CCGGGCCCTTTTCG TTGGTATCGCGATGG TERM 2572 5025804 - 5025831 + T 100 -20.6 -4.4773 | gap 1, opp_overlap 5025804, overlap 5025798 TCGGCATCACGGAAA GGGCCCGGACGCC ATC GGCG-CCGGGCCC TTTTCGTTGGTATCG TERM 2573 5025831 - 5025804 - T 100 -20.6 -3.68351 | gap 1, opp_overlap 5025798 5025804 TCGGCATCACGGAAA GGGCCCGGACGCC ATC GGCG-CCGGGCCC TTTTCGTTGGTATCG Swit_4567 5026336 - 5025860 - | AsnC family transcriptional regulator Swit_4568 5026475 - 5028349 + | histidine kinase Swit_4569 5029078 - 5028518 - | NADPH-dependent FMN reductase TERM 2574 5028792 - 5028812 + g 71 -2.4 -4.56597 | overlap 5028781 5028780 ATGTCGGTCGCCGGG CGCGAGAG CCAGT CGATCGCG TTTTTGAACACGCCG Swit_4570 5029980 - 5029090 - | pirin domain-containing protein Swit_4571 5030307 - 5030005 - | acetyltransferase-like protein Swit_4572 5030932 - 5030294 - | isochorismatase hydrolase Swit_4573 5031274 - 5032266 + | hypothetical protein TERM 2575 5032490 - 5032465 - g 71 -11.8 -3.66018 | opp_overlap 5032467 CGACGATTCGAAGAA GCTCGGCGCG GAGGCG CGCGCCGATC TGTGCGGCAAGATCC Swit_4574 5032310 - 5032918 + | ribonuclease H Swit_4575 5033350 - 5032919 - | hypothetical protein TERM 2576 5034405 - 5034381 - g 70 -12.9 -3.30124 | overlap 5034384 GTCGATCCCCGAGAA GAAGGCCATGC CGC GCATCGCCTTC GGCCTGCTCGTCGAG Swit_4576 5033515 - 5034663 + | DNA methylase N-4/N-6 domain-containing protein TERM 2577 5035784 - 5035813 + G 73 -7.1 -4.13767 | gap 1, overlap 5035798 ATCCGGGTGTGGCGC GGGATGCG-CGACG AGG CGTTGACGCCTTCC TTTTGACGTCGCCCC Swit_4577 5034704 - 5035819 + | dihydropteroate synthase Swit_4578 5037902 - 5035920 - | DNA topoisomerase IV subunit B TERM 2578 5037366 - 5037399 + g 70 -12.4 -3.35679 | gap 1, opp_overlap 5037365 5037363 GGGGGTGAAGGAGAC GCT-GGTGCCGCGCC GGTTG GGCGCCGCGCCCAGC TTCTCGATCGGGCCC TERM 2579 5037980 - 5037937 - R 71 -13.1 -3.08046 | overlap 5037941 GCTCGACGCCAAAAG GAAAGTGGCGCCGACACCG ATGCGA CGATGGCGGCGCGACCTCC GGTCAGCCGCAATAG TERM 2580 5037976 - 5037941 - R 89 -12.5 -4.20806 | overlap 5037937 GACGCCAAAAGGAAA GTGGCGCCGACACCG ATGCGA CGATGGCGGCGCGAC CTCCGGTCAGCCGCA Swit_4579 5038288 - 5037983 - | hypothetical protein Swit_4580 5038979 - 5038320 - | GcrA cell cycle regulator TERM 2581 5038744 - 5038758 + g 83 -12.8 -4.07568 | overlap 5038739 GGGGCCGGGCGCGGC GGCGGC GCG GCCGCC TTTTCGGGGGCGGGC TERM 2582 5039003 - 5039020 + H 71 -12.7 -3.01712 | CTCGTCTGCGCCCGC GCCTGGG CGTC CCCAGGC TCTTGCAGGCGGGGC Swit_4581 5039054 - 5039887 + | ABC-2 type transporter TERM 2583 5039877 - 5039887 + T 77 -4 -4.87803 | opp_overlap 5039877 5039881 ACCGCGGCTGGAAGA TCAA GAG TTGA TTTTGTTTGAGCCTC TERM 2584 5039939 - 5039881 - T 95 -20.4 -3.36273 | opp_overlap 5039877 5039936, overlap 5039877 5039936 CGGCTGGAAGATCAA GAGTTGATTTTGTTTGAGCCTCAGGCGC CCG GCGCCTGAGGCCCAATCAAAAAAAGCCC CGGCAAGAACCGGGG TERM 2585 5039955 - 5039936 - T 100 -12.8 -5.63103 | opp_overlap 5039936, overlap 5039881 GCCCAATCAAAAAAA GCCCCGGC AAGA ACCGGGGC TTTTCGGCTTACTTG TERM 2586 5039936 - 5039955 + T 86 -12.1 -4.21768 | opp_overlap 5039881 5039936 GCCCAATCAAAAAAA GCCCCGG CAAGAA CCGGGGC TTTTCGGCTTACTTG Swit_4582 5040254 - 5039964 - | hypothetical protein TERM 2587 5040313 - 5040328 + r 70 -7.5 -4.04806 | GCCCGACATGGGTTC CGCCG TTCACC CGGCG TTGTTTCGTATAGGA Swit_4583 5041387 - 5040389 - | glyoxylate reductase Swit_4584 5041505 - 5041987 + | hypothetical protein Swit_4585 5041984 - 5042520 + | GCN5-related N-acetyltransferase Swit_4586 5042649 - 5043119 + | 3-demethylubiquinone-9 3-methyltransferase Swit_4587 5043134 - 5043919 + | glyoxalase/bleomycin resistance protein/dioxygenase Swit_4588 5044668 - 5044069 - | hypothetical protein Swit_4589 5045629 - 5044700 - | peptidase S41 TERM 2588 5044738 - 5044772 + g 74 -12.1 -3.61398 | gap 1 CGGCGCCCTTGAGCA GCGCCACCGCCCTGGC CAGC GCCAGGTCGTTGG-GC TTCTTCGCCGCCGAC TERM 2589 5044897 - 5044946 + g 85 -11.4 -4.25104 | gap 3 GCAGGCCGTGGTCGA CGCCGCCGGTCACCG-CG-CCCGCG CTG CGCTGGCCGACGGTGAA-GGCGCCG TTTTCGTCGAGGAAA Swit_4590 5046594 - 5045629 - | hypothetical protein TERM 2590 5046588 - 5046546 - G 84 -16.9 -3.52896 | opp_overlap 5046541, overlap 5046549 GGAGGATCGACACAA GCAGGACCGGCGCCAGCAG GCTTG CCGCTCGCGCCGGTCCGTC GGGCATCTATCGGCC TERM 2591 5046585 - 5046549 - G 87 -21.6 -2.89793 | opp_overlap 5046541, overlap 5046546 GGATCGACACAAGCA GGACCGGCGCCAGCAG GCTTG CCGCTCGCGCCGGTCC GTCGGGCATCTATCG Swit_4591 5046940 - 5046608 - | hypothetical protein Swit_4592 5047099 - 5047491 + | hypothetical protein Swit_4593 5047777 - 5047514 - | hypothetical protein TERM 2592 5047931 - 5047898 - R 100 -23.3 -3.53012 | opp_overlap 5047898 5047904, overlap 5047904 CGTCGGGCGCGCAAA GAAAAACGCCGGGGG AGGA CCCCCGGCGTTTCTC GTTTCTTCGCGGTAT TERM 2593 5047898 - 5047931 + r 93 -21.1 -3.10052 | opp_overlap 5047898 5047904, overlap 5047904 CGTCGGGCGCGCAAA GAAAAACGCCGGGGG AGGA CCCCCGGCGTTTCTC GTTTCTTCGCGGTAT TERM 2594 5047904 - 5047925 + r 100 -18.7 -4.20981 | opp_overlap 5047898 5047904, overlap 5047898 GCGCGCAAAGAAAAA CGCCGGGGG AGGA CCCCCGGCG TTTCTCGTTTCTTCG TERM 2595 5047925 - 5047904 - R 100 -18.7 -5.27335 | opp_overlap 5047904 5047898, overlap 5047898 GCGCGCAAAGAAAAA CGCCGGGGG AGGA CCCCCGGCG TTTCTCGTTTCTTCG rpsI 5048526 - 5047960 - | 30S ribosomal protein S9 rplM 5049005 - 5048526 - | 50S ribosomal protein L13 Swit_4596 5050277 - 5049135 - | cytochrome oxidase assembly TERM 2596 5050492 - 5050434 - g 78 -14.3 -3.62046 | gap 1, opp_overlap 5050443 GGATGGGGTGAACAA GCCCCGGCGCGGCGTCACC-CGGCGCAG TCTG CTGGTCGGCGGCGGCGCGGCGGCGGGGC TGGTGCTGGGCTGGG TERM 2597 5052557 - 5052595 + G 78 -16.6 -3.01712 | GCGGCGCGGGCGAGA TCGCGGTGCCGCCGGTCG CCC CGGCCGTCGCCAACGCGA TCTTCGCCGCGACCG Swit_4597 5050348 - 5052654 + | isoquinoline 1-oxidoreductase Swit_4598 5052651 - 5053661 + | ferrochelatase Swit_4599 5053768 - 5054490 + | 3-oxoacyl-[acyl-carrier-protein] reductase Swit_4600 5054520 - 5054759 + | hypothetical protein Swit_4601 5054829 - 5055716 + | abortive infection protein Swit_4602 5056081 - 5055731 - | glyoxalase/bleomycin resistance protein/dioxygenase Swit_4603 5057229 - 5056258 - | oxidoreductase FAD/NAD(P)-binding subunit Swit_4604 5062169 - 5057508 - | glutamate dehydrogenase (NAD) TERM 2598 5058512 - 5058546 + g 87 -17.2 -3.25823 | CGGGCCGGGTCAGGC CGAGATGCTCCTGCGC GCG GCGCAGCAGCATGTCG TTGCTGTCGAAGCCG Swit_4605 5063617 - 5062394 - | hypothetical protein Swit_4606 5064208 - 5063879 - | hypothetical protein Swit_4607 5065377 - 5064205 - | Acetyl-CoA acetyltransferase-like protein Swit_4608 5067026 - 5065374 - | crotonobetaine/carnitine-CoA ligase Swit_4609 5068244 - 5067249 - | mandelate racemase/muconate lactonizing protein Swit_4610 5069143 - 5068385 - | XRE family transcriptional regulator TERM 2599 5068413 - 5068429 + g 77 -11.5 -3.86015 | overlap 5068416 CCGTCGCCCGCATCC GCCTCGC CGG GCGGGGC TTTGTCCCAGCGATG Swit_4611 5069286 - 5071640 + | TonB-dependent receptor, plug Swit_4612 5071640 - 5073673 + | beta-lactamase TERM 2600 5073700 - 5073746 + G 87 -19.5 -3.09516 | gap 2, overlap 5073702 TTTCCCCCCTTTCGT CACCGGACGCGCCGGCGCTCTCC CCT GGAG-GCGCCGGC-CGTACGCTG TTCGGTCATCCGCCC TERM 2601 5073702 - 5073744 + G 78 -16.3 -3.10796 | gap 2, overlap 5073700 TCCCCCCTTTCGTCA CCGGACGCGCCGGCGCTCTCC CCT GGAG-GCGCCGGC-CGTACGC TGTTCGGTCATCCGC Swit_4613 5073675 - 5075012 + | amino acid/peptide transporter Swit_4614 5077302 - 5075032 - | nitric oxide reductase large subunit-like protein TERM 2602 5077646 - 5077679 + G 76 -2.9 -4.68593 | CGGGTTTCCTGATCA CGGGCATCATCGCGC GCGA GATCGATGGAGGCCG TTTTTCGATCGTCCA Swit_4615 5077495 - 5079387 + | acyltransferase 3 Swit_4616 5079397 - 5080047 + | TetR family transcriptional regulator TERM 2603 5080094 - 5080064 - T 93 -16.9 -3.4072 | gap 1 CAGCCCGGACGAGAA CGGCCCGATCCCCC GCCA GGGAG-TCGGGCCG TCGATCGGTGACAAG TERM 2604 5080109 - 5080133 + T 73 -10.8 -3.61398 | gap 1, opp_overlap 5080109 GTCGATCGGTGACAA GGACCGG-GAA GGGG TTCACCGGTCC TTGTTCCCGAACCGG Swit_4617 5082102 - 5080150 - | hypothetical protein TERM 2605 5082201 - 5082218 + H 74 -2.7 -4.8622 | TCGATTCAAATTGAC TTTCTTG TCGC CAGGGAA TTTTTCCTTCCGCGG Swit_4618 5082431 - 5084632 + | TonB-dependent receptor, plug Swit_4619 5084659 - 5085168 + | hypothetical protein TERM 2606 5085176 - 5085211 + F 100 -19 -3.54424 | gap 1, overlap 5085178 GCCATTGAGGCCGTT GCTCGCCGGAGGGAGCC GAC GGCTCTCCCCGGCG-GC TTTCCGCCGGTCCGA TERM 2607 5085178 - 5085210 + F 87 -19.1 -2.72511 | overlap 5085176 CATTGAGGCCGTTGC TCGCCGGAGGGAGCC GAC GGCTCTCCCCGGCGG CTTTCCGCCGGTCCG TERM 2608 5085973 - 5085992 + G 71 -10 -3.73224 | gap 1 AATCGGCCTGTCCTC GCGCGATGC CGG GC-TCGCGC TTTCCTGCGCCATGC Swit_4620 5085254 - 5086417 + | major facilitator transporter Swit_4621 5086505 - 5087776 + | Rieske (2Fe-2S) domain-containing protein Swit_4622 5087773 - 5088183 + | hypothetical protein TERM 2609 5088206 - 5088244 + F 89 -16.9 -3.17075 | gap 1 GGCTTTCTGGCACCT GCTCATCCGTTGC-GTCC GTCC GGACCGCAACGGATGAGG TTCCCTTGGCGACAG TERM 2610 5088759 - 5088817 + G 78 -14.1 -3.64599 | gap 5, overlap 5088759 GGCGGCGGCGGACGG CC-TCG-CCG-CGATCAGCAGCGCGCCGAC GGCG GTCGGCGC-C-GCCGATCGGCGGGCGACGG TTTCCCATCTGATGG Swit_4623 5088250 - 5088891 + | TetR family transcriptional regulator Swit_4624 5089937 - 5088888 - | protein tyrosine/serine phosphatase Swit_4625 5092306 - 5090045 - | TonB-dependent receptor TERM 2611 5092232 - 5092189 - G 74 -14.6 -3.01924 | gap 1, opp_overlap 5092192 5092197 5092198 CACCCTTTCCGAACA CCACGATCTCGGCATCGTCGG TTT CCGACGATGCCGGCGTC-TGG GCGGCGGCGGGCATC Swit_4626 5092699 - 5093358 + | TetR family transcriptional regulator Swit_4627 5093758 - 5093372 - | response regulator receiver protein Swit_4628 5095294 - 5093930 - | methyl-accepting chemotaxis sensory transducer Swit_4629 5095881 - 5095336 - | hypothetical protein TERM 2612 5095790 - 5095831 + g 71 -11.6 -3.61398 | gap 2, opp_overlap 5095775 5095803, overlap 5095790 TCGTCCATGCCGGCG T-CCGGCGGGAAGACG-GCG ATCT CGCGCGTCGTCCCGCCGCCA TTCTTCCACGGGACC Swit_4630 5097551 - 5095884 - | urocanate hydratase Swit_4631 5098366 - 5097563 - | N-formylglutamate amidohydrolase Swit_4632 5100062 - 5098533 - | histidine ammonia-lyase Swit_4633 5101258 - 5100059 - | imidazolonepropionase TERM 2613 5102472 - 5102487 + G 71 -10.4 -3.73775 | overlap 5102457 CGGCGGGGCTGGCGG TCGGCC ACCC GGCCGA TTTCGTGACGCTCGA Swit_4634 5101334 - 5102692 + | N-formimino-L-glutamate deiminase Swit_4635 5102689 - 5103390 + | GntR family transcriptional regulator Swit_4636 5103484 - 5103972 + | hypothetical protein TERM 2614 5104401 - 5104426 + G 72 -8.9 -4.0162 | ACCCAGGCGGGCTGC GGCTTCGCCAA CGCC TCGGCGGGGCC TTTCTACTGTCCGGC Swit_4637 5104011 - 5104898 + | protein of unknown function, zinc metallopeptidase putative TERM 2615 5105002 - 5104957 - T 81 -10 -4.20868 | gap 3, opp_overlap 5104993 5104993 GCGGTAAAACAAGAA CTTGGAGCGG--C-CGATCTGAT GCA ATCAGATCGTGAACCGCTCTAAG CCGGCTTTTATTACC lldD 5106167 - 5105013 - | L-lactate dehydrogenase Swit_4639 5106780 - 5106211 - | nitroreductase Swit_4640 5108805 - 5106886 - | hypothetical protein TERM 2616 5107538 - 5107592 + g 73 -15.8 -2.52516 | gap 3, opp_overlap 5107511 5107510 5107508, overlap 5107537 GAATCCTGGGTCGCC TCCGGCACCGCGCG--GATCTCCAGCC GCTG GGC-GGGGATCATCGCGCGGGGCAGGA ATTCGTGCTGGCGCG Swit_4642 5109581 - 5110291 + | N-formylglutamate amidohydrolase Swit_4643 5110412 - 5110954 + | hypothetical protein Swit_4644 5111173 - 5111379 + | cold-shock DNA-binding protein family protein Swit_4645 5111384 - 5111644 + | translation initiation factor 1 TERM 2617 5111784 - 5111733 - g 87 -20.3 -3.04263 | gap 1, opp_overlap 5111738, overlap 5111737 AGGGCATCGCGAACA GGAACCTGGAACGAGCCGCGCGAT ATCCG ATCGCGCGGTTCGCTCC-GGTTCT CATGACAACCCGCGT TERM 2618 5111780 - 5111737 - g 91 -19.7 -3.36749 | gap 1, opp_overlap 5111738, overlap 5111733 CATCGCGAACAGGAA CCTGGAACGAGCCGCGCGAT ATCCG ATCGCGCGGTTCGCTCC-GG TTCTCATGACAACCC TERM 2619 5111738 - 5111780 + G 100 -22.1 -3.40403 | opp_overlap 5111737 5111733 ATCGCGAACAGGAAC CTGGAACGAGCCGCGCGAT ATCCG ATCGCGCGGTTCGCTCCGG TTCTCATGACAACCC Swit_4646 5111693 - 5111962 + | hypothetical protein Swit_4647 5112215 - 5111970 - | hypothetical protein Swit_4648 5113256 - 5112507 - | hypothetical protein Swit_4649 5114210 - 5113263 - | LysR family transcriptional regulator TERM 2620 5115341 - 5115308 - g 73 -13.1 -3.50853 | GGGGGTCAAGGACAA GCTGCCGAGCATCGC CGCG ACGCTGCCCGACAGC CTTCGCATCCTGCCG Swit_4650 5114397 - 5117591 + | acriflavin resistance protein Swit_4651 5117584 - 5118792 + | RND family efflux transporter MFP subunit Swit_4652 5118782 - 5120176 + | RND efflux system outer membrane lipoprotein TERM 2621 5120249 - 5120278 + T 77 -13.5 -3.28924 | CTTGCCGCGCCTCTC CCGAGATGCCGGC CTCC GCCGGCATGACGG TTATGGGACAGCCTC Swit_4653 5120887 - 5120303 - | hypothetical protein Swit_4654 5122090 - 5120897 - | peptidase M48, Ste24p Swit_4655 5122868 - 5122092 - | hypothetical protein Swit_4656 5124841 - 5122988 - | dihydroxy-acid dehydratase TERM 2622 5123624 - 5123597 - G 70 -12 -3.29511 | gap 1, opp_overlap 5123621 GCCATCCCTGGAGAA GGGC-TGCTCCGC GCT GCGGATCACGCCC GCCTCGCGGTCGAGG TERM 2623 5125805 - 5125770 - g 71 -11 -3.57144 | opp_overlap 5125793, overlap 5125771 5125800 CGCCGGAGCTCGAAA CCGGGCTGGCGTGGCG CGAG CGGGACGACAGCCCGA CGCTGGCGGCGTTCC Swit_4657 5124950 - 5125900 + | LysR family transcriptional regulator Swit_4658 5125955 - 5126341 + | hypothetical protein TERM 2624 5126635 - 5126595 - g 72 -13.7 -3.17392 | opp_overlap 5126630, overlap 5126597 GAGCGGGGAACCGAA GACCGACGCCGCCCGCGCG ATG CGCGCGCGCTGGGACGGGC CGGTCGAGCCGCTGG TERM 2625 5126633 - 5126597 - g 77 -14.9 -3.14878 | opp_overlap 5126630, overlap 5126595 GCGGGGAACCGAAGA CCGACGCCGCCCGCGCG ATG CGCGCGCGCTGGGACGG GCCGGTCGAGCCGCT Swit_4659 5126338 - 5127711 + | carbohydrate kinase, YjeF related protein Swit_4660 5127708 - 5128925 + | 23S rRNA (uracil-5-)-methyltransferase RumA Swit_4661 5129366 - 5128932 - | hypothetical protein Swit_4662 5129481 - 5129975 + | BLUF domain-containing protein TERM 2626 5130034 - 5129981 - T 86 -18.4 -2.54896 | gap 2, overlap 5129977 CTCGCACTGAAGGCA CTTCTCCATCTCTCCGTCATTCCCGC GAAA GCGGGAATGACGGAG-GA-GGATAGG TCGATCGCCCGAAAG Swit_4663 5131115 - 5130063 - | deoxyhypusine synthase-like protein Swit_4664 5132450 - 5131257 - | Orn/DAP/Arg decarboxylase 2 TERM 2627 5132057 - 5132088 + g 70 -12.2 -3.31792 | GGACGCACAGGGTCA GGTCGGTCGCGCCG TTGG TGGCGCGGACGATC TTCTCCAGCTCCTCG Swit_4665 5132741 - 5133751 + | cation diffusion facilitator family transporter TERM 2628 5134534 - 5134572 + G 77 -14.7 -3.15861 | gap 2, opp_overlap 5134544 GCCCGGCTGGCGGCG GCGGGCATAAGGCTGGTCG GCC CGGCC-GCC-TATGTCCGC TTCATGAGCCTCGTC Swit_4666 5133760 - 5134860 + | UDP-N-acetylglucosamine 2-epimerase Swit_4667 5134886 - 5135179 + | prevent-host-death family protein Swit_4668 5135176 - 5135568 + | PilT domain-containing protein Swit_4669 5137461 - 5136004 - | acyltransferase 3 TERM 2629 5138433 - 5138465 + G 82 -16.3 -3.35597 | overlap 5138431 GGCCTCTACGACGGC GACCACCGCGGCG AACATGG CGCCGCGCTGGTC TATTTCGACAATCGC Swit_4670 5137479 - 5138915 + | choline dehydrogenase-like flavoprotein Swit_4671 5138926 - 5139372 + | hypothetical protein Swit_4672 5139463 - 5140986 + | fumarase Swit_4673 5141062 - 5141349 + | excinuclease ABC subunit C TERM 2630 5141413 - 5141444 + T 76 -9.2 -4.07687 | overlap 5141414 AGGTGGTGCGACTCT CCTGAGGCCCCGGC CTCC GCCGGGGCGACGGC TTTTCAGGGCCAGGT TERM 2631 5141414 - 5141443 + T 71 -12.7 -3.04398 | overlap 5141413 GGTGGTGCGACTCTC CTGAGGCCCCGGC CTCC GCCGGGGCGACGG CTTTTCAGGGCCAGG Swit_4674 5142194 - 5141448 - | hypothetical protein Swit_4675 5143495 - 5142197 - | general substrate transporter Swit_4676 5144622 - 5143492 - | arylamine N-acetyltransferase TERM 2632 5144193 - 5144248 + g 86 -18.3 -3.15544 | CGAACGGGATGGTCA GGCGCTGGCCG-CGCTGGATGGCGGCG AGGC CGTCGGCAT-CGGCGGCGGGCGGCGCC TTGGTCGCGATACGG Swit_4677 5144664 - 5147111 + | excinuclease ABC subunit B Swit_4678 5147507 - 5147187 - | hypothetical protein Swit_4679 5147641 - 5148042 + | hypothetical protein TERM 2633 5148537 - 5148574 + GF 79 -13.5 -3.53012 | gap 1, opp_overlap 5148560 GTCTATGCCTGGATG CAGGCGATCGGGATGGTC AAC GACCATGCCGA-CACCTG TTTCCGGCGCGACGC Swit_4680 5148039 - 5148596 + | DNA-3-methyladenine glycosylase I Swit_4681 5148562 - 5149389 + | hypothetical protein TERM 2634 5149430 - 5149392 - T 79 -13.9 -3.53224 | gap 1 GAGCGCGGCCTGAAA TCTCCTCGTCACCCCGGC GGAG GCCGGGGTCTC-AGGAGA GATGCGCAGTGATCA Swit_4682 5150780 - 5149491 - | adenylosuccinate synthetase Swit_4683 5151998 - 5150850 - | tRNA synthetase, class II (G, H, P and S) TERM 2635 5151216 - 5151261 + g 79 -15.6 -3.30771 | gap 3, opp_overlap 5151181 GAGCGTCAGCGCGAC GCGG-TCGC--CGATCGCGGCGA CGA TCGCCTCGATCGCTGCGAGCCGC TTGTCGAGCGTCTGC TERM 2636 5152365 - 5152308 - g 78 -9.9 -4.19704 | gap 2, opp_overlap 5152353 5152361, overlap 5152309 5152364 CAACCTGATCGAAAA GGCCAATCCCGGCT-GGCG-CGATCTC TATGAG GAGATCATCGCCTAGCCGGGAGAGACA TGGGCCCCTGCCTGC TERM 2637 5152364 - 5152309 - g 72 -13.4 -3.11341 | gap 2, opp_overlap 5152353 5152361, overlap 5152308 AACCTGATCGAAAAG GCCAATCCCGGCT-GGCG-CGATCTC TATGAG GAGATCATCGCCTAGCCGGGAGAGAC ATGGGCCCCTGCCTG Swit_4684 5152054 - 5152353 + | excinuclease ABC subunit C Swit_4685 5153983 - 5152406 - | D-3-phosphoglycerate dehydrogenase Swit_4686 5155266 - 5154109 - | phosphoserine aminotransferase TERM 2638 5155519 - 5155537 + r 83 -13.2 -3.85698 | GACATGGATGCCAGC CTTCAGCC TCT GGCTGAAG TTTATCCCGAGCGCC TERM 2639 5155641 - 5155619 - R 100 -14.8 -5.33405 | opp_overlap 5155619 CCCAGCAAAGAAAAA GCCCCGGAGC GGA ACCCCGGGGC TTCATATCCTGTCGC TERM 2640 5155619 - 5155641 + r 72 -11.9 -3.31269 | opp_overlap 5155619 CCCAGCAAAGAAAAA GCCCCGGAG CGGAA CCCCGGGGC TTCATATCCTGTCGC Swit_4687 5156298 - 5155669 - | cytochrome c, class I TERM 2641 5156128 - 5156154 + g 74 -11.4 -3.71848 | opp_overlap 5156114 GGCGATCGGCTTGTC GGCCGCGGCGGC AGC GCCGGCGTCGCC TTCTTCCTCGACGCC Swit_4688 5156459 - 5157358 + | prephenate dehydratase TERM 2642 5157450 - 5157423 - T 74 -5.4 -4.56978 | opp_overlap 5157422, overlap 5157419 5157424 5157426 5157428 CGCCGAAAGAAGAAA TGAGATCCCGGC TTTC GCCGGGATGACG GTTCATGAGGGCGAG TERM 2643 5157445 - 5157428 - T 73 -12.7 -3.15458 | opp_overlap 5157422, overlap 5157426 5157424 5157423 5157419 AAAGAAGAAATGAGA TCCCGGC TTTC GCCGGGA TGACGGTTCATGAGG Swit_4689 5158365 - 5157472 - | NUDIX hydrolase Swit_4690 5159409 - 5158375 - | A/G-specific DNA-adenine glycosylase TERM 2644 5158704 - 5158726 + g 71 -11.2 -3.62522 | opp_overlap 5158700, overlap 5158705 CGATCCAGAAGGCGG TGCCGAGCCG CTG CGGCTTGGCC TTCTTCGCGGCCTTC TERM 2645 5158705 - 5158725 + g 70 -14.7 -2.77192 | opp_overlap 5158700, overlap 5158704 GATCCAGAAGGCGGT GCCGAGCCG CTG CGGCTTGGC CTTCTTCGCGGCCTT TERM 2646 5159852 - 5159819 - g 77 -15.2 -3.15544 | CCGGATCGCGATCAA GCCCGGCGCCTGCG CCGCGC CGCAGCCGCCGCGC GGCCGGGTGGCGCCG Swit_4691 5159424 - 5160017 + | hypothetical protein Swit_4692 5160014 - 5160739 + | protein-disulfide isomerase-like protein Swit_4693 5160843 - 5161586 + | protein-disulfide isomerase-like protein TERM 2647 5161645 - 5161592 - f 83 -17.5 -2.62184 | CGTTCGCTGACATGA CGCGCGGAAGCGCATCGGTGG AGACGGATTGAA CCGCCGATGCGCTTCCGCAAG CTCCGCCTGTCCGGT TERM 2648 5162395 - 5162368 - g 81 -18.4 -2.70932 | GGCGGCGCGCAAGGA GGCGACCGCCGC TGAG GCGGCCGTCGCC CAGGCGACCGAGGCG Swit_4694 5161631 - 5165053 + | chromosome segregation protein SMC Swit_4695 5165288 - 5165986 + | GDSL family lipase TERM 2649 5166001 - 5166027 + T 86 -16.5 -3.14132 | opp_overlap 5166001, overlap 5166024 ACCGGATAGGGGAAA CCCGGCGGCGG GGTGA CCGCCACCGGG TTGCTCGCAACGAAC TERM 2650 5166027 - 5166001 - T 100 -18.7 -3.63805 | opp_overlap 5166001 5166024 ACCGGATAGGGGAAA CCCGGCGGCGG GGTGA CCGCCACCGGG TTGCTCGCAACGAAC Swit_4696 5168345 - 5166054 - | TonB-dependent receptor TERM 2651 5168364 - 5168418 + r 70 -10.5 -3.65135 | gap 1, opp_overlap 5168376 5168377, overlap 5168364 5168394 5168396 TTTCCCTTGCGAGAC G-GGCGAGCGAAACCGCCGCCTGCAC GCGA GCGCAGGCGCCGCCATCGCTGGCCGC TTGTGGTTATTTGGC TERM 2652 5168405 - 5168376 - R 73 -11.3 -3.6502 | opp_overlap 5168364 5168364 5168394 5168396, overlap 5168377 GACGGGCGAGCGAAA CCGCCGCCTGCAC GCGA GCGCAGGCGCCGC CATCGCTGGCCGCTT TERM 2653 5168404 - 5168377 - R 75 -14.8 -2.78798 | opp_overlap 5168364 5168364 5168394 5168396, overlap 5168376 ACGGGCGAGCGAAAC CGCCGCCTGCAC GCGA GCGCAGGCGCCG CCATCGCTGGCCGCT Swit_4697 5168888 - 5168550 - | arsenate reductase Swit_4698 5170273 - 5168921 - | acetyl-CoA carboxylase, biotin carboxylase Swit_4699 5170726 - 5170280 - | biotin carboxyl carrier protein Swit_4700 5171195 - 5170803 - | 3-dehydroquinate dehydratase TERM 2654 5171531 - 5171543 + G 77 -3.4 -4.73613 | overlap 5171524 ACGATGGCGACGAGC TGGA AATCG TCCA TTTTGTTGGTGGTGG Swit_4701 5171224 - 5172348 + | bifunctional sulfur carrier protein/thiazole synthase protein Swit_4702 5173743 - 5172349 - | diguanylate cyclase with PAS/PAC sensor Swit_4703 5173893 - 5174357 + | cupin 2 domain-containing protein Swit_4704 5174704 - 5174378 - | antibiotic biosynthesis monooxygenase Swit_4705 5174932 - 5175816 + | acid phosphatase class B Swit_4706 5175998 - 5177332 + | beta-lactamase TERM 2655 5177803 - 5177823 + G 74 -12.5 -3.60627 | AGCCAGCTCGCCACG CTCGAGCGC AAC GCGCCCGAG TTTGGCGTCCGCTAC Swit_4707 5177521 - 5178960 + | isopropylmalate isomerase large subunit Swit_4708 5178957 - 5179787 + | beta-lactamase domain-containing protein Swit_4709 5179787 - 5180365 + | 3-isopropylmalate dehydratase, small subunit TERM 2656 5180358 - 5180386 + F 73 -10.9 -3.66256 | overlap 5180369 CGGCGGACCGGCCCT GGCTGTGACCGGA GGC TCCGGCCGGAGCC TCTTTTGCGAGTCTG TERM 2657 5180369 - 5180388 + F 93 -13.6 -4.13728 | overlap 5180358 CCCTGGCTGTGACCG GAGGCTCC GGCC GGAGCCTC TTTTGCGAGTCTGTG Swit_4710 5180466 - 5180789 + | hypothetical protein Swit_4711 5180793 - 5181026 + | BolA family protein Swit_4712 5181037 - 5181366 + | glutaredoxin-like protein Swit_4713 5181376 - 5182428 + | glycerophosphoryl diester phosphodiesterase Swit_4714 5182435 - 5183373 + | beta-lactamase domain-containing protein Swit_4715 5183355 - 5184401 + | quinolinate synthetase TERM 2658 5184404 - 5184429 + F 71 -8.9 -3.84451 | opp_overlap 5184419, overlap 5184406 5184408 5184419 GCCTAAAATGTAACC GTCATCCCGGC GAAA GCCGGGATCTC TTTGCCTTTGCCGAC TERM 2659 5184408 - 5184425 + F 74 -12.7 -3.32293 | opp_overlap 5184419, overlap 5184406 5184404 5184419 AAAATGTAACCGTCA TCCCGGC GAAA GCCGGGA TCTCTTTGCCTTTGC Swit_4716 5184496 - 5185344 + | nicotinate-nucleotide pyrophosphorylase [carboxylating] TERM 2660 5185585 - 5185574 - g 72 -3.6 -4.61199 | ATTGTATAGACAAAA GCAG CAGC CCGC AGGACCATATCCGAT Swit_4717 5185372 - 5186070 + | ribonuclease T2 Swit_4718 5186877 - 5186188 - | ribosomal RNA methyltransferase RrmJ/FtsJ Swit_4719 5187941 - 5186874 - | Ppx/GppA phosphatase Swit_4720 5188357 - 5189025 + | putative PAS/PAC sensor protein Swit_4721 5189425 - 5189018 - | response regulator receiver protein TERM 2661 5189854 - 5189901 + H 91 -4.6 -5.37593 | gap 1, overlap 5189858 ATTCGAACGCGCTGG GCGGTGTCGGGCCGCGACGCGTC GCC GAC-CGTCGCGACGACCCACAGC TTTTTTCGTTTCACC Swit_4722 5189958 - 5190629 + | glutathione S-transferase domain-containing protein Swit_4723 5192123 - 5190798 - | peptidase M20 TERM 2662 5193229 - 5193193 - g 71 -10.8 -3.65522 | gap 1, opp_overlap 5193199, overlap 5193196 GATCCACGGCAACAA GAGCCAGCCGCAGCGCG AGCG CGCGCTG-GGCCTGTTC CGCACGGGCGAGGTC Swit_4724 5192315 - 5193676 + | DEAD/DEAH box helicase domain-containing protein TERM 2663 5193797 - 5193821 + T 100 -14.3 -5.40072 | overlap 5193785 5193798 TCCTGCGGATGGTCC CCCTCCCCATC TGT GATGGGGAGGA TTTTTTTAGGCGCCC TERM 2664 5193798 - 5193820 + T 100 -17.8 -3.83561 | overlap 5193785 5193797 CCTGCGGATGGTCCC CCTCCCCATC TGT GATGGGGAGG ATTTTTTTAGGCGCC Swit_4725 5194993 - 5193827 - | hypothetical protein TERM 2665 5195041 - 5195056 + r 70 -11.8 -3.14132 | opp_overlap 5195035, overlap 5195048 TCAAGCAATCGTCAT CCCGGC GGAG GCCGGG TTGCTCAGGCCGGGC Swit_4726 5196938 - 5195061 - | multi-sensor hybrid histidine kinase TERM 2666 5195426 - 5195370 - G 87 -20.1 -2.99473 | opp_overlap 5195419, overlap 5195363 5195400 5195401 GGAAATCACGACATA GCCGAGGTCGCGCAGCGCATCGACC GAGAAGT GGCGGACGCGCTGCTCGTCCTCGAC GACCAGGATCGTCTC TERM 2667 5195828 - 5195859 + g 75 -8.6 -4.11216 | CGCCCGGCATCGCGT CGCGCGCGTTGACC GCCA GGTTGACGACCGCG TTTTCGAGCTGGCCC Swit_4727 5199146 - 5197020 - | DNA ligase, NAD-dependent TERM 2668 5197816 - 5197789 - G 70 -8.3 -3.83026 | overlap 5197790 TGGCGCGACACGAAA TGGCGCAGCCG CTCGAC CCGCTGCGCCG GGCAGATCAGGCCGC TERM 2669 5198157 - 5198212 + g 78 -8.2 -4.38712 | overlap 5198144 GGTCTGGGCCTTTTC GGCCGGGAATTTGT-GCGCGATCGCC CAGCGC GGCGCGCGCGCGACGAAG-CCCAGCC TTTTCTGCCAGTCGA Swit_4728 5199967 - 5199311 - | hypothetical protein Swit_4729 5201652 - 5199991 - | DNA repair protein RecN TERM 2670 5200394 - 5200342 - G 77 -15.6 -3.21416 | gap 2, opp_overlap 5200350 5200352 5200374 GAGCGCCAGGATGAA GCGCGACAGTTCGCCGCCGCTGGCGA TCT TCATCAGCGGCG-CGAAGGG-CGCGC CCGGATTGGTCGCGA Swit_4730 5202564 - 5201698 - | alpha/beta hydrolase domain-containing protein TERM 2671 5202668 - 5202698 + H 83 -16.2 -2.94099 | GATGGGGCGCCCAGC GCGTCATCCCGGAT CAC GTCCGGGATGACGA TCTATCGTGGCGACG TERM 2672 5203061 - 5203038 - H 75 -13.8 -2.98493 | overlap 5203035 GTGATGACGAAACGA GCATCGGCGC GTCA GCGCCGTTGC GGAGTGCGGCGATGC TERM 2673 5204128 - 5204164 + G 80 -18 -2.91681 | gap 2 GGCGCTCGCCAAGCC GGCGACGGCGCCCGCCGG CGA CCGGCGCG-GCCG-CGCC TATCTGCGCTTCACC Swit_4731 5203073 - 5204407 + | homoserine dehydrogenase TERM 2674 5204619 - 5204598 - g 78 -8.6 -4.25104 | TCGCGGCGACGAAAA GGCCGCGG ACCATG CCGCGGTC GAAGCGATGCGCGCA glpX 5204488 - 5205456 + | fructose 1,6-bisphosphatase II TERM 2675 5205512 - 5205536 + F 73 -10.7 -3.62597 | opp_overlap 5205512 GCCTGGGCAATGAGA GGGTGAGGGCA CGC TATCCTCACCC TTGTTGCCGGATGGC Swit_4733 5205598 - 5207364 + | single-stranded-DNA-specific exonuclease RecJ TERM 2676 5207783 - 5207758 - g 74 -12.5 -3.65201 | overlap 5207759 GAACATGTCGAACAA TGCCGCCGTCA CCAT CGACGGCGGCG AGATCGGCCGGGCGC TERM 2677 5207782 - 5207759 - g 74 -16 -2.78639 | overlap 5207758 AACATGTCGAACAAT GCCGCCGTCA CCAT CGACGGCGGC GAGATCGGCCGGGCG Swit_4734 5207627 - 5209084 + | adenosylcobyric acid synthase (glutamine-hydrolysing) TERM 2678 5209116 - 5209093 - T 100 -16 -4.54727 | opp_overlap 5209092 TGGCTGAAAGGAAAA GGGCCCGGTC TCGC GACCGGACCC CTATCTGGAAACCGT Swit_4735 5209584 - 5209153 - | 17 kDa surface antigen Swit_4736 5209791 - 5210276 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2679 5210606 - 5210568 - g 74 -15.9 -2.72379 | gap 1 GCAACCCGCCAACGA CGGCGCCGACGCGGCGGC CGAT GCGGCCGCGCCGCC-CCG GACGCGCAAGGCGCG Swit_4737 5210359 - 5211333 + | anti-FecI sigma factor, FecR TERM 2680 5212042 - 5212018 - g 78 -13.6 -3.61715 | gap 1 GATCGTGCCGAACAA GCCCGACCTCG CCGA CG-GGTCGGGC TTCGCCGCGATCGAC TERM 2681 5212380 - 5212425 + G 91 -15.4 -3.83026 | gap 1, opp_overlap 5212378 5212376 5212375, overlap 5212384 5212406 CCCATGACAATGATT TCG-TCGCGCTGACCGCGACC GTCCG GGGCGTGGTCGGCGCGTTCGA TTTCGTGTCGGCCAG TERM 2682 5212384 - 5212420 + G 89 -19.4 -3.32159 | opp_overlap 5212378 5212376 5212375, overlap 5212380 5212406 TGACAATGATTTCGT CGCGCTGACCGCGACC GTCCG GGGCGTGGTCGGCGCG TTCGATTTCGTGTCG Swit_4738 5211320 - 5213590 + | TonB-dependent receptor Swit_4739 5213654 - 5214904 + | hypothetical protein Swit_4740 5217172 - 5214908 - | integral membrane sensor signal transduction histidine kinase Swit_4741 5218307 - 5217123 - | peptidoglycan-binding LysM TERM 2683 5218084 - 5218028 - GR 70 -13 -2.90075 | opp_overlap 5218076 5218079, overlap 5218026 TGCCGCGGAAGGAGA CGACCTTGCCGACCACCGGCTCGG-TGC GGA GCAGCCG-GTCGGGGATCAGCAGGATCG AGCCGATCGGCATCC Swit_4742 5219122 - 5218307 - | two component transcriptional regulator Swit_4743 5220762 - 5219491 - | hypothetical protein Swit_4744 5224048 - 5220962 - | acriflavin resistance protein Swit_4745 5225249 - 5224068 - | RND family efflux transporter MFP subunit TERM 2684 5224805 - 5224767 - G 70 -12.3 -3.25823 | gap 1 GGCCTTGGAGATGAA GCCGCGCGCGACCAGCGC CTTG GCGC-GGTCGAGTTCGGC CTGGGCAAGCTCGGC Swit_4746 5225467 - 5226201 + | hypothetical protein TERM 2685 5226251 - 5226298 + F 90 -17.8 -3.08133 | opp_overlap 5226273, overlap 5226258 GAGGGACTGAGCCTT GGCGAAGGCCCGTCTCGAAGGA CCAC TCCTTCGAGACGCCATTTCGCC TTCGCTCAATGGCTC TERM 2686 5226644 - 5226618 - g 78 -15.9 -3.05384 | gap 1, overlap 5226590 5226603 GCTGCGCCGACCCAA TCGCCGCG-CGG CGGT CCGACGCGGCGA TCATAGACCTTTTCG Swit_4747 5226320 - 5226673 + | hypothetical protein Swit_4748 5227456 - 5226695 - | hypothetical protein TERM 2687 5227548 - 5227522 - R 100 -19.5 -4.63486 | opp_overlap 5227543 ACCGCGCCAAGAAAA GAGCCGCCGGA TCATC TCCGGCGGCTC CAAGGCGTCGTTGCC Swit_4749 5227826 - 5227578 - | transglycosylase-associated protein TERM 2688 5227979 - 5227956 - R 100 -19.6 -5.06414 | overlap 5227973 CGCGCGCAAGAAAAA GGCCCGCTCC GGAA GGAGCGGGCC GGCCGGCCGCGGTAA Swit_4750 5228313 - 5228014 - | hypothetical protein TERM 2689 5228349 - 5228389 + H 73 -11.3 -3.60098 | gap 2 GGACGACCGGACTGC GTTTCC--GAAGGCCTGGC TATCC GCCCGGCCTTCAAGGAAAC TTTGCGGTGAACGGT Swit_4751 5228555 - 5229946 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Swit_4752 5230906 - 5230112 - | PhzF family phenazine biosynthesis protein Swit_4753 5231793 - 5230903 - | cation diffusion facilitator family transporter Swit_4754 5232392 - 5231790 - | pyridoxamine 5'-phosphate oxidase Swit_4755 5233762 - 5232389 - | GntR family transcriptional regulator Swit_4756 5233872 - 5234039 + | hypothetical protein Swit_4757 5234056 - 5234667 + | lysine exporter protein LysE/YggA Swit_4758 5234759 - 5238136 + | transglutaminase domain-containing protein Swit_4759 5238144 - 5240681 + | hypothetical protein TERM 2690 5241560 - 5241535 - g 74 -13.3 -3.37464 | overlap 5241537 GCAGGAAGGGCAGAA GATCGACGTCG CGGT CGACGTCGAGC CGGTGGGGTAGGTTT TERM 2691 5241558 - 5241537 - g 79 -14.5 -3.25459 | overlap 5241535 AGGAAGGGCAGAAGA TCGACGTCG CGGT CGACGTCGA GCCGGTGGGGTAGGT Swit_4760 5240693 - 5241571 + | transglutaminase domain-containing protein Swit_4761 5241796 - 5241575 - | hypothetical protein TERM 2692 5241865 - 5241888 + G 88 -11 -4.52589 | gap 1, opp_overlap 5241858 GTTAACAAGTGCAAC GTCGCGGCTGG CGC CCGGC-GCGAC TTTTCTCTAGCGCGC Swit_4762 5241858 - 5243252 + | hypothetical protein TERM 2693 5243356 - 5243389 + F 74 -11.8 -3.4252 | gap 1 TGCGGAAGCGTGATG TCGGACC-GCATCGG GTAAG CCGGTGCAGGTTCGA TTGTCCTACCTCACC Swit_4763 5243446 - 5243616 + | hypothetical protein Swit_4764 5245138 - 5243633 - | 2-octaprenylphenol hydroxylase TERM 2694 5243721 - 5243678 - G 77 -14.7 -3.20382 | gap 3 GGCGAGACCCAGGAA CAGC-GCGATCGCGATCCGGCC CCC GGCCG--CCGCGATCGCCGCCG AGGGATCGGCGGGAC Swit_4765 5245962 - 5245123 - | hypothetical protein TERM 2695 5246107 - 5246073 - g 73 -12.1 -3.53012 | gap 1, overlap 5246074 CGTTGTTCGCGCAAA CCGCGACGTCGCGCGG CTTA CCGT-CGACGTCGCGC CAGGTGGTCGCGCCG TERM 2696 5246106 - 5246074 - g 70 -15.6 -2.71712 | gap 1, overlap 5246073 GTTGTTCGCGCAAAC CGCGACGTCGCGCGG CTTA CCGT-CGACGTCGCG CCAGGTGGTCGCGCC Swit_4766 5245987 - 5246265 + | hypothetical protein Swit_4767 5246399 - 5247385 + | heat shock protein DnaJ domain-containing protein TERM 2697 5247509 - 5247488 - g 74 -15.9 -2.74488 | opp_overlap 5247481, overlap 5247476 5247490 GAAGCACCTGAACCA GATGCGCCC CGGC GGGCGCATC TACACCGTCTTCCGC Swit_4768 5247429 - 5248352 + | ribonuclease BN TERM 2698 5248601 - 5248643 + G 72 -4 -4.56597 | gap 1, overlap 5248576 CCTTCGCGGCGCTGG CCGCGCGC-TGGCCGACGA TCGACT TCCTCGTCCATGCGATCGG TTTTTCGGACAAGAA Swit_4769 5248363 - 5249166 + | enoyl-[acyl-carrier-protein] reductase [NADH] Swit_4770 5249324 - 5250394 + | chorismate synthase Swit_4771 5250391 - 5250690 + | acylphosphatase Swit_4772 5250687 - 5251460 + | hypothetical protein Swit_4773 5252256 - 5251474 - | hypothetical protein Swit_4774 5252962 - 5252549 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2699 5252643 - 5252597 - G 73 -13 -3.46534 | overlap 5252595 GAATTCGACGAAATA GCCGCCGGGGTCGCA-CACGCG GAACT CG-GTGGTGCGGCCGCGGCAGC CGGGCTGGAAGCCGT Swit_4775 5253473 - 5252979 - | MarR family transcriptional regulator TERM 2700 5254185 - 5254204 + G 72 -5.7 -4.30576 | gap 1, opp_overlap 5254173 CAACGCGATCACGAT CGG-GCTG ATGCC CAGCGCCG TTTTCCTGCTCGAAC Swit_4776 5253571 - 5254950 + | sodium:neurotransmitter symporter Swit_4777 5255020 - 5256195 + | aminotransferase, class V TERM 2701 5256293 - 5256274 - T 71 -5 -4.46926 | gap 1, overlap 5256278 5256281 CATCTGAGGAGAAAA CAGACATGG ACC CCA-GCCTG CGCTGGGGTGACGGG Swit_4778 5257401 - 5256349 - | cupin 2 domain-containing protein Swit_4779 5257837 - 5257481 - | hypothetical protein TERM 2702 5257931 - 5257880 - H 83 -16.4 -2.87211 | gap 1 ACTCGCCGCCATAGA GGCGCGCGACGCGCTCCAACTCGGC ATC GCTGGGCCGGCGCGGGTCG-GCGCC CGTCGACACAGCGGC Swit_4780 5258082 - 5258636 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2703 5258614 - 5258647 + T 85 -14.5 -3.67597 | gap 1, overlap 5258615 TCGAGATATTGACTT GGACGGCCAGC-CAGC CAG GCTGAGCCGGCCGGCC TTCTTCGGTGACAAG TERM 2704 5258700 - 5258662 - T 95 -21.1 -3.28712 | opp_overlap 5258668, overlap 5258668 CTTCTTCGGTGACAA GGAAAACCCCCGCCGGC GCGAT GCCGACGGGGGTTTTTC TTCGCGGGTGGCAGG TERM 2705 5258668 - 5258694 + T 100 -17.2 -5.06816 | opp_overlap 5258662 5258668 CGGTGACAAGGAAAA CCCCCGCCGGCG CGA TGCCGACGGGGG TTTTTCTTCGCGGGT TERM 2706 5258694 - 5258668 - T 100 -18.7 -4.48987 | opp_overlap 5258668, overlap 5258662 CGGTGACAAGGAAAA CCCCCGCCGGC GCGAT GCCGACGGGGG TTTTTCTTCGCGGGT Swit_4781 5261006 - 5258745 - | TonB-dependent receptor TERM 2707 5261153 - 5261139 - R 71 -5.6 -4.34402 | opp_overlap 5261139 5261140, overlap 5261140 5261141 TTGCGGATATGAAAA TGGCCT GAT AGGCCG TTTGGAAATGCGGTT TERM 2708 5261198 - 5261141 - R 74 -14.3 -2.51871 | gap 1, opp_overlap 5261140 5261139 5261162, overlap 5261139 5261140 5261162 5261185 5261186 5261189 GCGGATATGAAAATG GC-CTGATAGGCCGTTTGGAAATGCGGT TTC ACCGCATTTCCAAACCGACCCTCATCGC GGGGCGAAGATGGCG Swit_4782 5263099 - 5261192 - | peptidase M61 domain-containing protein Swit_4783 5264678 - 5263329 - | hypothetical protein Swit_4784 5266401 - 5264803 - | glutamate synthase (NADPH) Swit_4785 5266923 - 5266489 - | dihydroneopterin aldolase Swit_4786 5269228 - 5266907 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 2709 5269337 - 5269287 - H 71 -9.6 -3.76952 | gap 2, overlap 5269289 5269290 GGTAGGGAATGGAAA GAGGTCAGCGCGCCGCGTCGGGCC TCGAC GGCGGG-CGCGGCGCGCT-ATCGC ATTCGGCCGGGCGGC TERM 2710 5269336 - 5269289 - H 71 -11.1 -3.46783 | gap 1, overlap 5269287 5269290 TAGGGAATGGAAAGA GGTCAGCGCGCCGCGTCGGGCC TCGAC GGCGGG-CGCGGCGCGCTATCG CATTCGGCCGGGCGG TERM 2711 5269335 - 5269290 - H 74 -14.6 -2.67588 | gap 1, overlap 5269289 5269287 AGGGAATGGAAAGAG GTCAGCGCGCCGCGTCGGGCC TCGAC GGCGGG-CGCGGCGCGCTATC GCATTCGGCCGGGCG TERM 2712 5269479 - 5269421 - H 81 -15.4 -3.06183 | gap 3, opp_overlap 5269438, overlap 5269423 5269436 CGGAGGTCGACGGAA GAGCGCGCGAACGAACGGCCC-CGGCGCA TCGA TG-GCCGCGGGGCTTTCGT-CGCGCGATC CACCGGAGGAACCCC Swit_4787 5269891 - 5272518 + | aconitate hydratase Swit_4788 5272518 - 5273714 + | methylitaconate delta2-delta3-isomerase Swit_4789 5273818 - 5274123 + | hypothetical protein Swit_4790 5274120 - 5275277 + | methylcitrate synthase Swit_4791 5275288 - 5276211 + | 2,3-dimethylmalate lyase Swit_4792 5276288 - 5277760 + | XRE family transcriptional regulator Swit_4793 5280852 - 5278234 - | hypothetical protein TERM 2713 5279104 - 5279076 - G 73 -15.9 -2.62616 | overlap 5279028 GGATCGTCCAGAGCA GGCCGGCCCAGGC GGC GCGCGGGCCGACC GGATCGGCCATCATG TERM 2714 5280176 - 5280156 - G 72 -13.9 -3.18023 | overlap 5280154 5280157 GGATCAGGACGAACA GCGCCGCCG AGG CGGCGGCGA GGTCGATCCCCGCGA TERM 2715 5280175 - 5280157 - G 77 -17.4 -2.50492 | overlap 5280156 5280154 GATCAGGACGAACAG CGCCGCCG AGG CGGCGGCG AGGTCGATCCCCGCG Swit_4794 5281297 - 5280845 - | hypothetical protein Swit_4795 5281808 - 5281401 - | hypothetical protein TERM 2716 5282363 - 5282335 - g 74 -13.8 -3.38272 | CATGATGAGCCAGAA CCGCCAGGCGGC GAAGG ACCGGCTGGCGG CGAGCCTCGACTATG Swit_4796 5281973 - 5282497 + | hypothetical protein Swit_4797 5282499 - 5282891 + | PDZ/DHR/GLGF domain-containing protein Swit_4798 5282888 - 5283580 + | two component transcriptional regulator TERM 2717 5284500 - 5284537 + G 86 -13.5 -3.86346 | gap 1 CGAGAGCTTCGTCGA CCTCGACC-TGTCGGCGA TGG TCGAGGACATGGTCGAGG TTTATGGGCCGCTCG Swit_4799 5283583 - 5284932 + | integral membrane sensor signal transduction histidine kinase TERM 2718 5286441 - 5286389 - g 82 -14.8 -3.44051 | gap 1, opp_overlap 5286417 5286436, overlap 5286392 CGGCGAGGAGGAGAA GCA-CAGCGCCTGTCCGGCGATCCC GGCG GGGCTGGCCGAGCAGGTGCTGCTGC CCGGCGGCCATCATT TERM 2719 5286437 - 5286392 - g 72 -15.3 -2.87243 | opp_overlap 5286417 5286436, overlap 5286389 CGAGGAGGAGAAGCA CAGCGCCTGTCCGGCGATCCC GGCG GGGCTGGCCGAGCAGGTGCTG CTGCCCGGCGGCCAT Swit_4800 5285031 - 5286509 + | virulence factor family protein Swit_4801 5286506 - 5287228 + | Type IV secretory pathway VirJ component-like protein TERM 2720 5287234 - 5287251 + T 81 -12.7 -3.72576 | opp_overlap 5287234 GGGCGCATGAAAAAA GGGCCAC CGAA GTGGCCC TTTGCTGGAGGAACA TERM 2721 5287251 - 5287234 - T 100 -12.7 -5.14563 | opp_overlap 5287234 GGGCGCATGAAAAAA GGGCCAC CGAA GTGGCCC TTTGCTGGAGGAACA Swit_4802 5287527 - 5287285 - | hypothetical protein Swit_4803 5287829 - 5288851 + | helix-turn-helix domain-containing protein Swit_4804 5289030 - 5291351 + | TonB-dependent receptor Swit_4805 5291400 - 5292581 + | hypothetical protein TERM 2722 5292815 - 5292801 - g 73 -12.8 -3.53012 | GGCGCGCCTTCGAAA CCGGCC CCT GGCCGG CGATGCGCCCGCACG Swit_4806 5292581 - 5294086 + | aldehyde dehydrogenase Swit_4807 5294100 - 5295623 + | FAD linked oxidase domain-containing protein Swit_4808 5295635 - 5296027 + | limonene-1,2-epoxide hydrolase TERM 2723 5296473 - 5296445 - g 71 -9.5 -3.73224 | gap 1, overlap 5296416 CGACGCTCTACGAAA GCTGCGC-CGCC TGCCAT GGCGCGCGCGGC GAGGGCAATGCCGAA Swit_4809 5296033 - 5296674 + | cytochrome c, class I Swit_4810 5296697 - 5298301 + | glucose-methanol-choline oxidoreductase TERM 2724 5298370 - 5298388 + F 78 -3 -5.00884 | opp_overlap 5298382, overlap 5298372 CGATCATTGGATCGT TGGCAGCT GAA AGCGGCAA TTTTTTCGGCGCCGT Swit_4811 5298438 - 5298746 + | hypothetical protein Swit_4812 5299534 - 5298761 - | metallophosphoesterase TERM 2725 5299632 - 5299588 - R 81 -12.7 -3.74693 | gap 1, opp_overlap 5299586 5299588 CCCTAGTCGACGAAA GGGCCGGAGGAAAGACGCCG ACGACG CGGCGGCGC-CCGCCGGCCC TATTTCGCGCCGAAA Swit_4813 5300918 - 5299632 - | sugar transferase Swit_4814 5301225 - 5301614 + | hypothetical protein TERM 2726 5301638 - 5301667 + F 91 -15.1 -3.86524 | opp_overlap 5301644, overlap 5301644 CCATCAGCGAATCGA TAGAAAGGGCGGC GTGA GCCGCCCTTTTTG TTTCTGGGGCGATGT TERM 2727 5301661 - 5301644 - f 90 -14.1 -4.09108 | opp_overlap 5301638 5301644 GCGAATCGATAGAAA GGGCGGC GTGA GCCGCCC TTTTTGTTTCTGGGG TERM 2728 5301644 - 5301661 + F 100 -14.1 -5.38054 | opp_overlap 5301644, overlap 5301638 GCGAATCGATAGAAA GGGCGGC GTGA GCCGCCC TTTTTGTTTCTGGGG TERM 2729 5303374 - 5303393 + G 70 -4.2 -4.39748 | overlap 5303377 GCGACTATCCCTTGC GTGTGCCA TCGC TGGCGTGC TTCTTTTGTGTCATA Swit_4815 5302062 - 5303462 + | O-antigen polymerase Swit_4816 5303474 - 5304235 + | polysaccharide export protein TERM 2730 5304278 - 5304267 - f 78 -3 -5.0538 | CGTTAGTGGAAAAAA TTCA TGCG TGAA GCGGCAGAAGTGCAG Swit_4817 5304306 - 5306489 + | non-specific protein-tyrosine kinase Swit_4818 5306502 - 5307704 + | hypothetical protein Swit_4819 5308883 - 5307705 - | MscS mechanosensitive ion channel Swit_4820 5310343 - 5308880 - | O-antigen polymerase Swit_4821 5310595 - 5311800 + | glycosyl transferase, group 1 Swit_4822 5311886 - 5313310 + | hypothetical protein TERM 2731 5313327 - 5313305 - T 85 -14.8 -3.6106 | overlap 5313306 CGGAACATGGTCAAA CGCTGACGGC GAC GCCGTCGGCG ACGGTCAGCGCCTCC Swit_4823 5313806 - 5313300 - | hypothetical protein Swit_4824 5313906 - 5314556 + | putative phage repressor Swit_4825 5314748 - 5314569 - | hypothetical protein TERM 2732 5314710 - 5314727 + g 75 -8.3 -4.20712 | overlap 5314719 GAAGGCGAGGATCGC GCCGCCC GCGC GGGAGGC TTTTCCGCTATTCTG Swit_4826 5314890 - 5315153 + | hypothetical protein TERM 2733 5316893 - 5316907 + G 73 -12.8 -3.48276 | opp_overlap 5316891, overlap 5316871 TCGGCCGAACGGATC GCGCCG ACC CGGCGC TTCTATGCGGGCGGC TERM 2734 5317174 - 5317217 + G 95 -17.4 -3.71873 | gap 1 GATCCGCGTCGATGT CGGCACACCGCTGAATCGCCG GCC CGGCGATTC-GCGGATCGCCG TTTACGTCTCGCTCG Swit_4827 5315234 - 5317246 + | surface antigen (D15) Swit_4828 5317246 - 5321424 + | hypothetical protein TERM 2735 5321433 - 5321457 + F 75 -14.3 -2.7012 | overlap 5321428 5321422 5321447 CTATTAGGCTGGATC TGGTCGGCTGC TTG GCAGCGGACCA TCCTGTGCTATGTTC Swit_4829 5321503 - 5321904 + | DoxX family protein Swit_4830 5323165 - 5321909 - | Bcr/CflA subfamily drug resistance transporter TERM 2736 5322375 - 5322334 - G 73 -16.5 -2.52896 | CGATCCGCGAATTGA GCAGCGCCGCGATCGCCAT CATC ACCGCGATCGCGGCGAAGC CGGGCGCGAACAGCT TERM 2737 5323260 - 5323220 - R 100 -24.2 -4.4078 | gap 1, opp_overlap 5323227, overlap 5323227 GGCTGGCAACCAAAA GAGAAAAGGGCCCCGGGGC ACTG GCCCCGGAGCCCTTT-CTC GAAGCGCCTTTCGGC TERM 2738 5323227 - 5323254 + r 100 -19.8 -3.85817 | opp_overlap 5323227 5323220 AACCAAAAGAGAAAA GGGCCCCGGGGC ACTG GCCCCGGAGCCC TTTCTCGAAGCGCCT TERM 2739 5323254 - 5323227 - R 100 -22 -4.93333 | opp_overlap 5323227, overlap 5323220 AACCAAAAGAGAAAA GGGCCCCGGGGC ACTG GCCCCGGAGCCC TTTCTCGAAGCGCCT Swit_4831 5324691 - 5323279 - | L-glutamine synthetase Swit_4832 5325110 - 5324772 - | nitrogen regulatory protein P-II TERM 2740 5325266 - 5325250 - R 83 -8 -4.58395 | opp_overlap 5325239 5325250 GGCATGCCTGAAAAA TGGGCA GTTTG TGCCCA TGGATTGATCTTGGA Swit_4833 5326137 - 5325298 - | methionine aminopeptidase, type I Swit_4834 5326250 - 5327020 + | molybdopterin binding domain-containing protein Swit_4835 5328252 - 5326993 - | major facilitator transporter Swit_4836 5328392 - 5328799 + | membrane-like protein Swit_4837 5328804 - 5329178 + | glutathione-dependent formaldehyde-activating, GFA TERM 2741 5329727 - 5329769 + G 95 -19 -3.551 | CGGCGCCGGGGCGGG GGCGGCGGTGGGCGCGGCGT TCG GCGCCCCGCTGACCGGCGCC TTCTATGCGTTCGAG Swit_4838 5329209 - 5330963 + | chloride channel, core Swit_4839 5331903 - 5330977 - | taurine catabolism dioxygenase TauD/TfdA Swit_4840 5333033 - 5332008 - | methyltransferase type 11 Swit_4841 5333836 - 5333033 - | hypothetical protein Swit_4842 5334113 - 5335489 + | amine oxidase Swit_4843 5335486 - 5336262 + | hypothetical protein TERM 2742 5336589 - 5336624 + G 82 -14.6 -3.4072 | opp_overlap 5336570, overlap 5336592 5336594 5336620 GTCGCGATCGTCGGC GACGACGAGGCCGACC CGGC GGCCGGCCTCGTCTCC TTCTCCTCGCCGCTC TERM 2743 5336592 - 5336621 + G 82 -19.3 -2.86271 | opp_overlap 5336570, overlap 5336589 5336594 5336620 GCGATCGTCGGCGAC GACGAGGCCGACC CGGC GGCCGGCCTCGTC TCCTTCTCCTCGCCG TERM 2744 5336594 - 5336619 + G 78 -16.1 -2.98072 | opp_overlap 5336570, overlap 5336592 5336589 GATCGTCGGCGACGA CGAGGCCGACC CGGC GGCCGGCCTCG TCTCCTTCTCCTCGC Swit_4844 5336259 - 5336732 + | GreA/GreB family elongation factor Swit_4845 5338550 - 5336751 - | ABC transporter related TERM 2745 5337086 - 5337054 - G 90 -20.5 -3.14132 | CGCGTCGGCGAGGAA GGCGCGCGCGAGCGC CAC GCGCTGGCGCTCGCC GCCCGACAGCTTGAC TERM 2746 5338462 - 5338415 - G 81 -9.6 -4.26344 | overlap 5338416 5338455 ACAGGGGCACGAAAA TCTCGGTGACCGTCGCGGCGGT GATG ACCAGCGCGACGAACGCCGCGC GGCCGCGCAGCCTGC Swit_4846 5338865 - 5339401 + | hypothetical protein Swit_4847 5340109 - 5339411 - | protein of unknown function DUF899, thioredoxin family protein TERM 2747 5339831 - 5339811 - G 73 -12.5 -3.53012 | TCGGCCTGCTCGAAA TGCCGTCGC GCG GCGTCGGCA TGGTCCATGGTGAAC Swit_4848 5340357 - 5340133 - | hypothetical protein Swit_4849 5340444 - 5341667 + | tetratricopeptide TPR_4 Swit_4850 5341707 - 5342339 + | hypothetical protein Swit_4851 5342944 - 5342360 - | TetR family transcriptional regulator Swit_4852 5343027 - 5345345 + | TonB-dependent receptor Swit_4853 5345366 - 5346658 + | metallophosphoesterase TERM 2748 5346662 - 5346696 + T 88 -14.3 -3.72576 | opp_overlap 5346666, overlap 5346666 TCCGCCAAATAGGAA AAAAGGCCGCGTTCC GATGA GGAACGCGGCCTTGC TTTGCTCCCGGCAGC TERM 2749 5346666 - 5346692 + T 100 -19.5 -3.56704 | opp_overlap 5346666, overlap 5346662 CCAAATAGGAAAAAA GGCCGCGTTCC GATGA GGAACGCGGCC TTGCTTTGCTCCCGG TERM 2750 5346692 - 5346666 - T 100 -19.5 -5.32699 | opp_overlap 5346666 5346662 CCAAATAGGAAAAAA GGCCGCGTTCC GATGA GGAACGCGGCC TTGCTTTGCTCCCGG Swit_4854 5347423 - 5346728 - | two component transcriptional regulator Swit_4855 5348634 - 5347585 - | hypothetical protein TERM 2751 5347766 - 5347800 + gr 75 -12 -3.54741 | overlap 5347767 GCCCGCAACGCCGAT CCGCGCGCCCGCTTCG ACT CGAACTCGGCGCGCGA TTTCAACACATAGTG TERM 2752 5347767 - 5347799 + gr 78 -15.5 -2.7263 | overlap 5347766 CCCGCAACGCCGATC CGCGCGCCCGCTTCG ACT CGAACTCGGCGCGCG ATTTCAACACATAGT Swit_4856 5349526 - 5348603 - | GumN family protein glyQ 5349680 - 5350555 + | glycyl-tRNA synthetase subunit alpha TERM 2753 5350571 - 5350600 + F 72 -7.7 -4.20367 | opp_overlap 5350588, overlap 5350575 5350588 TCATGCTTTCCAATG GCGTCATCCCGGC GAAA GCCGGGATCTCAC TTCTTTCTTCCCGCG TERM 2754 5350643 - 5350588 - f 100 -19 -3.53811 | opp_overlap 5350575 5350571 5350588, overlap 5350627 GTCATCCCGGCGAAA GCCGGGATCTCACTTCTTTCTTCCCG CGGC CGGCACGAAGGCAGGGAGATCCCGGC TTTCGCCGGGATGAC TERM 2755 5350588 - 5350643 + F 100 -21.2 -3.53811 | opp_overlap 5350588 5350627, overlap 5350575 5350571 GTCATCCCGGCGAAA GCCGGGATCTCACTTCTTTCTTCCCG CGGC CGGCACGAAGGCAGGGAGATCCCGGC TTTCGCCGGGATGAC Swit_4858 5350676 - 5352709 + | glycine--tRNA ligase TERM 2756 5353036 - 5353017 - g 72 -9.2 -4.00445 | opp_overlap 5353000 GATCACCAACAAGAA GTTCGGCG TCGC CGCCGATC CGCTGCTGGTGTCGG Swit_4859 5352766 - 5355435 + | pyruvate phosphate dikinase Swit_4860 5355592 - 5356755 + | hypothetical protein TERM 2757 5357785 - 5357799 + G 71 -10 -3.72576 | TTTCGCCCAGGACGA TCCGTC CGT GACGGA TTTCATGCAGGAGCA Swit_4861 5356892 - 5357989 + | Rieske (2Fe-2S) domain-containing protein Swit_4862 5357986 - 5358738 + | response regulator receiver protein Swit_4863 5359338 - 5358766 - | hypothetical protein TERM 2758 5359006 - 5359057 + g 70 -12.3 -3.36492 | gap 3, overlap 5359001 5359006 GTCGCGCTGGCCCGA G-GCCGCGGCGGCGATCGTC-CCGGC GGT GTCGGCGTTGATCGCCGG-GCGGCGC TTCTCCAATTCGGCG Swit_4864 5360432 - 5359440 - | type II secretion system protein TERM 2759 5359543 - 5359557 + g 76 -7 -4.25104 | ACCGTCATGATCGCG GGCAGC CGC GCGGCC TTTTCCTCCGCGCGC Swit_4865 5361414 - 5360440 - | type II secretion system protein Swit_4866 5362705 - 5361437 - | response regulator receiver protein Swit_4867 5363463 - 5362705 - | hypothetical protein TERM 2760 5363291 - 5363345 + g 79 -2.2 -4.86731 | gap 3, overlap 5363318 5363320 5363322 GGCGTCGCGGCGAGG GCGATGATCCCGAGTGTC-CCGAGGAT CGTC ATCC-CGGCGAAAGCCGGGATC-TCTC TTTTCTTTCCGGACC TERM 2761 5363318 - 5363343 + g 72 -8.9 -4.05678 | overlap 5363291 5363320 5363322 AGTGTCCCGAGGATC GTCATCCCGGC GAAA GCCGGGATCTC TCTTTTCTTTCCGGA TERM 2762 5363322 - 5363339 + g 70 -12.7 -3.36516 | overlap 5363320 5363318 5363291 TCCCGAGGATCGTCA TCCCGGC GAAA GCCGGGA TCTCTCTTTTCTTTC Swit_4868 5365057 - 5363477 - | type II and III secretion system protein Swit_4869 5366055 - 5365057 - | SAF domain-containing protein Swit_4870 5366597 - 5366124 - | peptidase A24A, prepilin type IV Swit_4871 5366646 - 5367749 + | FAD dependent oxidoreductase TERM 2763 5368033 - 5368049 + F 74 -5.1 -4.64766 | overlap 5368029 5368034 TTGAGATTGATTTGC TTTGCGA TTG TCGCGAG TTTTTCGACTGTGGC Swit_4872 5368264 - 5368770 + | hypothetical protein Swit_4873 5368811 - 5373028 + | YD repeat-containing protein Swit_4874 5373495 - 5373695 + | hypothetical protein Swit_4875 5374585 - 5373692 - | methyltransferase type 12 Swit_4876 5374770 - 5375075 + | hypothetical protein Swit_4877 5375447 - 5375079 - | hypothetical protein Swit_4878 5376178 - 5375429 - | UBA/THIF-type NAD/FAD binding protein Swit_4879 5376656 - 5376207 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Swit_4880 5377860 - 5376643 - | phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase TERM 2764 5377393 - 5377357 - G 70 -13 -3.25823 | gap 2 TTCGCTCCAGATGAA CGGCG-GCTCGGG-CAGG CGG CCGGGCCCGAACTCGCCG CAGGCCATCGCTCCA Swit_4881 5378192 - 5377857 - | transcriptional modulator of MazE/toxin, MazF Swit_4882 5378406 - 5378182 - | AbrB family transcriptional regulator Swit_4883 5379971 - 5378439 - | 2-octaprenylphenol hydroxylase Swit_4884 5380750 - 5379968 - | ubiquinone/menaquinone biosynthesis methyltransferase Swit_4885 5380919 - 5381731 + | formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase rpsT 5381839 - 5382102 + | 30S ribosomal protein S20