TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.663037 %AT, 2363314 nt, 12300 terms. Intergenic: 0.708844 %AT, H2T: 383149 nt, 2914 terms; T2T: 106736 nt, 2351 terms; H2H: 100095 nt, 1474 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|57634611|ref|NC_002758.2| Staphylococcus aureus subsp. aureus Mu50, complete genome (length 2878529) dnaA 517 - 1878 + | chromosomal replication initiation protein TERM 1 2433 - 2423 - g 84 -4 -5.69473 | GATATTATAAAAAAA TTAC CTG GTAA AGATGTTAAATTATC dnaN 2156 - 3289 + | DNA polymerase III subunit beta TERM 2 3345 - 3297 - f 80 -6.3 -4.91852 | opp_overlap 3303 3307 3337, overlap 3303 CTTACTAAAAATAAA TATAAATAAAGGATGACGT GATTAATTAAA ACGTCATCCTTTATTTTTT GGCAAAAATAATTCT TERM 3 3339 - 3303 - f 100 -9.7 -4.56642 | opp_overlap 3303 3307 3337, overlap 3297 AAAAATAAATATAAA TAAAGGATGACGT GATTAATTAAA ACGTCATCCTTTA TTTTTTGGCAAAAAT TERM 4 3303 - 3339 + F 100 -9.7 -5.00884 | opp_overlap 3303 3297, overlap 3307 3337 AAAAATAAATATAAA TAAAGGATGACGT GATTAATTAAA ACGTCATCCTTTA TTTTTTGGCAAAAAT TERM 5 3307 - 3335 + F 81 -6.1 -5.04249 | opp_overlap 3303 3297, overlap 3303 ATAAATATAAATAAA GGATGACGT GATTAATTAAA ACGTCATCC TTTATTTTTTGGCAA SAV0003 3670 - 3915 + | hypothetical protein TERM 6 4471 - 4457 - g 79 -8.6 -3.84246 | GTTGGAAGTATTAAA TCAGCA GTT TGCTGA ATATGCAATGAAAGT recF 3912 - 5024 + | recombination protein F gyrB 5034 - 6968 + | DNA gyrase subunit B gyrA 7005 - 9674 + | DNA gyrase subunit A TERM 7 9712 - 9683 - T 100 -12.3 -5.97979 | opp_overlap 9683 AGAATAATAAAAAAA TAAGACTTCCCTA TATG TAGGGGAGTCTTA TTTTTATGCTAGAAA TERM 8 9683 - 9712 + T 100 -14.5 -4.91109 | opp_overlap 9683 AGAATAATAAAAAAA TAAGACTTCCCTA TATG TAGGGGAGTCTTA TTTTTATGCTAGAAA SAV0007 10592 - 9762 - | hypothetical protein TERM 9 10779 - 10793 + H 71 -8.6 -2.83641 | TTAATATCCTTTAAC GCACTA CAA TAGTGC TCTGATAATAGGTTA hutH 10900 - 12414 + | histidine ammonia-lyase TERM 10 12603 - 12614 + F 70 -5.8 -4.25658 | opp_overlap 12603 12602 ATTTAAAAGAACAAT CGGT GATA ACCG TTATTTTAGTGAAGT TERM 11 12689 - 12715 + F 100 -17.4 -6.14618 | opp_overlap 12694 GGGTGGCAACGCGTA GACCACGTCCCT TGT AGGGATGTGGTC TTTTTTTATTTTCTA serS 12793 - 14079 + | seryl-tRNA synthetase TERM 12 14185 - 14164 - f 73 -5.8 -4.67556 | opp_overlap 14164, overlap 14166 ATAATATTTTAAAAA GTGGTGAC GAAGCT GTCGCCAC TTTTTTTGTGCTGTA TERM 13 14164 - 14185 + F 100 -8.7 -5.69473 | opp_overlap 14164 14166 ATAATATTTTAAAAA GTGGTGACG AAGC TGTCGCCAC TTTTTTTGTGCTGTA TERM 14 14635 - 14600 - f 91 -11.2 -3.137 | opp_overlap 14597 14600 14602 14604 ATGAAGATGATTGAA GACGCCAGTATGTCTA ACCT CAGACAAACTGGTGTC TAATGTTATTGCTTA TERM 15 14600 - 14635 + F 100 -12.7 -2.88074 | opp_overlap 14600, overlap 14597 14602 14604 ATGAAGATGATTGAA GACGCCAGTATGTCT AACCTC AGACAAACTGGTGTC TAATGTTATTGCTTA TERM 16 14602 - 14633 + F 75 -9.5 -2.97825 | opp_overlap 14600, overlap 14600 14597 14604 GAAGATGATTGAAGA CGCCAGTATGTCT AACCTC AGACAAACTGGTG TCTAATGTTATTGCT SAV0010 14730 - 15425 + | hypothetical protein SAV0011 15422 - 15751 + | hypothetical protein TERM 17 16061 - 16087 + F 93 -4.5 -6.23545 | TGATAAGTATAAAGA CTTCTTACTTT TCAAT AGGGTGAGAAG TTTTTTTTGTTTAAG SAV0012 16094 - 17083 + | putative homoserine-o-acetyltransferase SAV0013 17319 - 18314 + | hypothetical protein SAV0014 18329 - 20296 + | hypothetical protein rplI 20293 - 20739 + | 50S ribosomal protein L9 TERM 18 20898 - 20866 - g 77 -9.2 -3.23711 | opp_overlap 20868 20871, overlap 20868 20871 TCCAGAATTGATTAA TACTACTCAGGAAG TTTTG CTTCCTGAGTCGTT TTATAGGGGTGCCCA TERM 19 20868 - 20896 + G 100 -12.5 -4.38712 | opp_overlap 20866 20868 20871, overlap 20871 CAGAATTGATTAATA CTACTCAGGAAGT TTT GCTTCCTGAGTCG TTTTATAGGGGTGCC TERM 20 20896 - 20868 - g 89 -11.8 -3.18033 | opp_overlap 20868 20871, overlap 20866 20871 CAGAATTGATTAATA CTACTCAGGAAG TTTTG CTTCCTGAGTCG TTTTATAGGGGTGCC TERM 21 20871 - 20893 + G 91 -12.8 -3.17598 | opp_overlap 20868 20866 20871, overlap 20868 AATTGATTAATACTA CTCAGGAAGT TTT GCTTCCTGAG TCGTTTTATAGGGGT TERM 22 20893 - 20871 - g 84 -12.1 -2.78266 | opp_overlap 20871 20868, overlap 20868 20866 AATTGATTAATACTA CTCAGGAAG TTTTG CTTCCTGAG TCGTTTTATAGGGGT TERM 23 21029 - 21017 - g 85 -10.5 -3.34895 | opp_overlap 21015 GGTACGTTGAATGAA GCGGG TGG CCCGC AATATCTTGCAGAGT dnaC 20771 - 22171 + | replicative DNA helicase TERM 24 22182 - 22217 + F 74 -2.1 -5.64321 | gap 2, opp_overlap 22193 TGTAAAAAAGTTTTT CCGTACAA--TAATCAT TAAG ATGATAAAATTGTACGG TTTTTATTTTGTTCT purA 22449 - 23732 + | adenylosuccinate synthetase TERM 25 23773 - 23798 + F 85 -7.6 -4.72863 | opp_overlap 23773 ATTATAAATACATGA GCCTTCTATC TTTATT GGTAGGAGGC TTTTGCTTTGTTTGC TERM 26 24343 - 24322 - f 100 -13.1 -3.91144 | opp_overlap 24322 TCGAGACCGTACAAA TGCCTATCC AAGA GGATAGGCA TTTTTTTGCGTTTAA TERM 27 24322 - 24343 + F 100 -13.1 -5.58209 | opp_overlap 24322 TCGAGACCGTACAAA TGCCTATCC AAGA GGATAGGCA TTTTTTTGCGTTTAA TERM 28 24381 - 24419 + F 93 -8.5 -5.03227 | gap 2, opp_overlap 24379 24381 TTAATAAAAGATATA TGGACGAAT-GAT-AATCA TAT TGATTTATCTGTTCGTCCA TTTTCTTTATAATGT vicR 24929 - 25636 + | response regulator vicK 25649 - 27475 + | two-component sensor histidine kinase SAV0020 27441 - 28802 + | hypothetical protein SAV0021 28803 - 29591 + | hypothetical protein SAV0022 29980 - 30780 + | hypothetical protein TERM 29 30788 - 30834 + F 78 -3 -5.55695 | gap 1, opp_overlap 30787, overlap 30789 CAATATAAATGAGAG TCACCCTATAAAGTTCGGCAC TGCTGT GAGACG-ACTTTATCGGGTGC TTTTTTATGTTATTG TERM 30 32906 - 32892 - g 72 -5 -4.68424 | overlap 32894 CAAGTTATTTAAAAA CAGCTA ACA TAGCTA AGTATGATACGACAG SAV0023 31007 - 33325 + | 5'-nucleotidase precursor TERM 31 33342 - 33377 + F 100 -9.2 -5.60993 | opp_overlap 33330 33344, overlap 33344 ATATATTGAAAACAA TACTACTGTATTTCTT AAAT AAGAGGTACGGTAGTG TTTTTTTATGGAAAA TERM 32 33344 - 33375 + F 100 -9.6 -4.45201 | opp_overlap 33344, overlap 33342 ATATTGAAAACAATA CTACTGTATTTCTT AAAT AAGAGGTACGGTAG TGTTTTTTTATGGAA TERM 33 34088 - 34107 + G 73 -7.8 -3.76048 | opp_overlap 34084 CAGCAAAATGACATT CCCACATC AAAT GATGCGGG TTGTGTTAATTGAGC SAV0024 33693 - 34172 + | hypothetical protein TERM 34 34784 - 34829 + G 77 -8.8 -3.53811 | opp_overlap 34790 TCCGGAAGGAGAAGG CATAT-ACTTATCTTTGAATCA AGGA TGGT-CAAAGATAAGTGATATG TTTCCGCGGGATAAA SAV0025 34455 - 35750 + | hypothetical protein TERM 35 35867 - 35895 + F 100 -11.9 -5.69068 | opp_overlap 35867 35870 GTCCACAGTCTGAAA CAAGATTCCTATA TTC TTTAGGAATCTTG TTTTTTCTATTTTTA TERM 36 35895 - 35867 - f 95 -11.9 -3.59262 | opp_overlap 35867, overlap 35870 GTCCACAGTCTGAAA CAAGATTCCTATA TTC TTTAGGAATCTTG TTTTTTCTATTTTTA TERM 37 35892 - 35870 - f 76 -7.8 -3.93256 | opp_overlap 35867, overlap 35867 CACAGTCTGAAACAA GATTCCTATA TTC TTTAGGAATC TTGTTTTTTCTATTT SAV0026 36165 - 36404 + | hypothetical protein tnp 37110 - 36436 - | transposase for IS-like element TERM 38 36479 - 36502 + g 82 -7.4 -4.58943 | opp_overlap 36478 36479 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 39 37065 - 37051 - G 76 -10 -2.90763 | TGTATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT SAV0028 37407 - 37201 - | truncated replication protein for plasmid SAV0029 38205 - 37411 - | truncated replication protein for pUB110 plasmid SAV0030 38310 - 38230 - | hypothetical protein TERM 40 38418 - 38402 - R 78 -3 -5.5943 | gap 1, opp_overlap 38403 38404, overlap 38404 AAACCATCAAAAAAA GACACCT TTTC AGGTG-C TTTTTTTATTTTATA TERM 41 38403 - 38418 + r 88 -3.2 -6.14618 | opp_overlap 38402 38404, overlap 38404 AACCATCAAAAAAAG ACACCT TTTC AGGTGC TTTTTTTATTTTATA TERM 42 38417 - 38404 - R 76 -6.7 -4.41456 | opp_overlap 38403 38404, overlap 38402 ACCATCAAAAAAAGA CACCT TTTC AGGTG CTTTTTTTATTTTAT TERM 43 38404 - 38417 + r 74 -6.7 -4.25111 | opp_overlap 38404 38402, overlap 38403 ACCATCAAAAAAAGA CACCT TTTC AGGTG CTTTTTTTATTTTAT pre 39691 - 38429 - | plasmid recombination enzyme TERM 44 39097 - 39108 + g 71 -3 -5.08015 | CTAGAAAATCAATCT CTTT TTCC AAAG TTTGTTTTTTAAATT TERM 45 39918 - 39889 - g 93 -3.5 -6.11392 | gap 1, opp_overlap 39890 39900 39908, overlap 39890 AAAGAAACAAAAAAA CCTGCCCTCTGCCA CCT CAGCAAAGGGG-GG TTTTGCTCTCGTGCT SAV0032 39800 - 39940 + | hypothetical protein TERM 46 40126 - 40149 + G 84 -8.2 -4.63932 | opp_overlap 40126 ACTCAAAATAAAAAA GATACAAGAG AGGT CTCTCGTATC TTTTATTCAGCAATC TERM 47 40149 - 40126 - g 100 -10.4 -5.80951 | opp_overlap 40126 ACTCAAAATAAAAAA GATACAAGAG AGGT CTCTCGTATC TTTTATTCAGCAATC TERM 48 40151 - 40184 + G 89 -11.9 -3.24386 | AGGTCTCTCGTATCT TTTATTCAGCAATCG CGCC CGATTGCTGAACAGA TTAATAATAGATTTT SAV0033 39988 - 40179 + | hypothetical protein bleO 40602 - 40198 - | bleomycin resistance protein aadD 41589 - 40819 - | kanamycin nucleotidyltransferase tnp 42456 - 41782 - | transposase for IS-like element TERM 49 41825 - 41848 + g 82 -7.4 -4.58943 | opp_overlap 41824 41825 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 50 42411 - 42397 - G 76 -10 -2.90763 | TGTATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT SAV0038 42540 - 42881 + | HMG-CoA synthase TERM 51 42938 - 42985 + F 83 -3.2 -5.80817 | gap 2, opp_overlap 42938 CTAACTCGAAATAAA TAAGCATATCAC--TAAACT GATTTTTTAA AGTTTACAGTGATATGCTTA TTTTTTTATCTTACG TERM 52 43175 - 43156 - f 71 -5.8 -4.45399 | AGAGGAATAGTAAAA GCAATTCT AAGT AAAATTGC AGATAAGAGGTTTGT SAV0039 43678 - 44421 + | glycerophosphoryl diester phosphodiesterase-like protein SAV0040 44518 - 44946 + | hypothetical protein TERM 53 44994 - 44944 - T 100 -15.9 -2.67428 | gap 1, opp_overlap 44944 44947 44952, overlap 44947 44952 CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA TERM 54 44944 - 44994 + T 100 -15.9 -3.35912 | gap 1, opp_overlap 44944 44947 44952, overlap 44947 44952 CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA TERM 55 44991 - 44947 - T 100 -13.2 -3.48153 | gap 1, opp_overlap 44944 44947 44952, overlap 44944 44952 ATTAATAATTCATAA TAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTG TTATTCATCTATATC TERM 56 44947 - 44991 + T 100 -13.2 -3.81089 | gap 1, opp_overlap 44947 44944 44952, overlap 44944 44952 ATTAATAATTCATAA TAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTG TTATTCATCTATATC TERM 57 44952 - 44986 + T 100 -10.9 -4.93661 | gap 1, opp_overlap 44947 44944 44952, overlap 44947 44944 TAATTCATAATAAAA CAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTG TTTTGTTATTCATCT TERM 58 44986 - 44952 - T 100 -13.1 -4.80959 | gap 1, opp_overlap 44952 44947 44944, overlap 44947 44944 TAATTCATAATAAAA CAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTG TTTTGTTATTCATCT mecA 46998 - 44992 - | penicillin binding protein 2 prime TERM 59 45823 - 45834 + g 74 -2.2 -5.48063 | AATCTGGAACTTGTT GAGC AGAG GTTC TTTTTTATCTTCGGT TERM 60 47018 - 47049 + H 81 -8.2 -4.04206 | opp_overlap 47018 47020, overlap 47020 ATCCTCCTTATATAA GACTACATTTGTAG TATA TTACAAATGTAGTA TTTATGTCAAAATAA TERM 61 47020 - 47047 + H 90 -10.8 -3.615 | opp_overlap 47018 47020, overlap 47018 CCTCCTTATATAAGA CTACATTTGTAG TATA TTACAAATGTAG TATTTATGTCAAAAT TERM 62 47047 - 47020 - H 80 -10.1 -3.31726 | opp_overlap 47020 47018, overlap 47018 CCTCCTTATATAAGA CTACATTTGTA GTATAT TACAAATGTAG TATTTATGTCAAAAT mecR1 47098 - 48855 + | methicillin resistance protein TERM 63 48979 - 48968 - g 72 -5.8 -4.42081 | overlap 48971 AATACAAATGCAAAA GGAC TGGA GTCC AAAAACCATTCGTAC mecI 48855 - 49226 + | methicillin resistance regulatory protein TERM 64 49246 - 49229 - f 90 -7.1 -5.55001 | GAATAAAAAATAAAA TTGTTGT GTTT ACAACAA TACATAGAAAACAGA TERM 65 49300 - 49251 - f 100 -14.7 -3.31208 | opp_overlap 49258, overlap 49258 GTTTACAACAATACA TAGAAAACAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTGTTTTTTA GTTGAAAAAATTAAC TERM 66 49293 - 49258 - f 100 -12.8 -4.69028 | opp_overlap 49258, overlap 49251 ACAATACATAGAAAA CAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTG TTTTTTAGTTGAAAA TERM 67 49258 - 49293 + F 100 -10.6 -5.26875 | opp_overlap 49258 49251 ACAATACATAGAAAA CAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTG TTTTTTAGTTGAAAA TERM 68 49916 - 49933 + G 71 -3.5 -5.18866 | TATTCTTCTGAAGGT TAATCAT CTTT ATGGTTA TTTTATTTCTTTGGA xylR 49713 - 50843 + | xylose repressor-like protein TERM 69 50929 - 50895 - T 100 -17.4 -5.60993 | opp_overlap 50895 GTCTTTATAAAAAAA TCCCTCAATCCGAA TTGAATT TTCGGATTGAGGGA TTTTTATAGTTCTAT TERM 70 50895 - 50929 + T 100 -17.4 -5.02439 | opp_overlap 50895 GTCTTTATAAAAAAA TCCCTCAATCCGAA TTGAATT TTCGGATTGAGGGA TTTTTATAGTTCTAT SAV0045 51349 - 50957 - | hypothetical protein SAV0046 52291 - 51353 - | hypothetical protein TERM 71 52291 - 52277 - G 72 -5.8 -4.37092 | ATTGTCTTCATAAAA TTGTTT GAA AAACAA AAAAAACTCCTTTTT SAV0047 53388 - 52324 - | hypothetical protein TERM 72 53440 - 53469 + H 100 -8.7 -5.22258 | opp_overlap 53439 53448 AACGGATAGAATCAT TTGCCAAATACCT ATAG GGGTATTTGACAA TTTTGTTTTAATTTA SAV0048 53524 - 53784 + | hypothetical protein SAV0049 53784 - 54428 + | hypothetical protein TERM 73 54633 - 54680 + T 76 -2.8 -5.57396 | opp_overlap 54637, overlap 54634 54636 54637 TATTTCAAAAATAGT AAAACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGCTGA TTTTTTATTCATTGT TERM 74 54636 - 54677 + T 76 -8.9 -3.51774 | opp_overlap 54637, overlap 54634 54633 54637 TTCAAAAATAGTAAA ACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGC TGATTTTTTATTCAT TERM 75 54637 - 54676 + T 100 -12.4 -2.69438 | opp_overlap 54637, overlap 54636 54634 54633 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA TERM 76 54676 - 54637 - T 100 -14.6 -4.60746 | opp_overlap 54637 54636 54634 54633 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA SAV0050 55435 - 54767 - | hypothetical protein TERM 77 54910 - 54932 + g 82 -4.2 -5.45652 | ATGATTTAGATGTGT TGTGATTATA AAT TCTAATCGCA TTTTTTATTCCAAAT SAV0051 55961 - 55788 - | hypothetical protein TERM 78 55920 - 55882 - G 73 -9.2 -2.86315 | overlap 55854 55881 55877 CAAATCAAAATTAAT TGGTTATAATGAAC GCTTAATGTCA GTTCATTATAACCA GTAAGGAGAAGGTTA ermA 55963 - 56694 + | rRNA methylase TERM 79 56742 - 56701 - T 75 -7.5 -4.10552 | gap 1, opp_overlap 56705 56709, overlap 56705 56709 TTTCACTAAATTAAA GTAATAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTATT-C TTCCCAAAAATTGTT TERM 80 56705 - 56739 + T 81 -9.5 -3.61894 | opp_overlap 56701 56705 56709, overlap 56709 ACTAAATTAAAGTAA TAAAGCGTTCTCT AATTTCACA AGAGGACGCTTTA TTCTTCCCAAAAATT TERM 81 56739 - 56705 - T 81 -9.4 -3.66117 | opp_overlap 56705 56709, overlap 56701 56709 ACTAAATTAAAGTAA TAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTA TTCTTCCCAAAAATT TERM 82 56735 - 56709 - T 71 -5.8 -4.42206 | opp_overlap 56709 56705, overlap 56705 56701 AATTAAAGTAATAAA GCGTTCTCTAAT TTC ACAAGAGGACGC TTTATTCTTCCCAAA TERM 83 56709 - 56735 + T 71 -5.9 -4.44667 | opp_overlap 56705 56701 56709, overlap 56705 AATTAAAGTAATAAA GCGTTCTCT AATTTCACA AGAGGACGC TTTATTCTTCCCAAA ant(9) 57602 - 56820 - | O-nucleotidylltransferase tnpC 58130 - 57753 - | transposase C tnpB 60029 - 58137 - | transposase B tnpA 61111 - 60026 - | transposase A truncated-radC 61547 - 61230 - | hypothetical protein SAV0058 62086 - 61568 - | hypothetical protein SAV0059 62403 - 62092 - | hypothetical protein TERM 84 62162 - 62129 - G 70 -2.4 -5.25699 | opp_overlap 62131, overlap 62130 62131 ATCACATAATAAAAA GCGTCTACGCCATC TTCACG AATGACGTAGACTT TCTTAGGTAATGCAT TERM 85 62131 - 62160 + g 71 -6.5 -4.21974 | opp_overlap 62131 62130 62129 CACATAATAAAAAGC GTCTACGCCAT CTTCACGA ATGACGTAGAC TTTCTTAGGTAATGC TERM 86 62160 - 62131 - G 73 -9.4 -2.83191 | opp_overlap 62131, overlap 62130 62129 CACATAATAAAAAGC GTCTACGCCATC TTCACG AATGACGTAGAC TTTCTTAGGTAATGC SAV0060 62840 - 62490 - | hypothetical protein TERM 87 63108 - 63127 + r 90 -10.8 -3.61089 | overlap 63119 AATAACGGGATTTTG GGATTGTG CTTG CACAATCC TTCTGCTTCTTCGAA ccrB 64986 - 63358 - | cassette chromosome recombinase B TERM 88 63394 - 63421 + g 75 -9.9 -2.50354 | opp_overlap 63395, overlap 63393 63392 63401 TTGGGGCAAAAACAA AGACGAAGTGC TGAGAT GCACTTCGTCG AGTTGTTTATTATTG TERM 89 63420 - 63395 - G 100 -13.4 -4.85782 | opp_overlap 63394 63393 63392 63401 TGGGGCAAAAACAAA GACGAAGTGC TGAGAT GCACTTCGTC GAGTTGTTTATTATT TERM 90 65008 - 65030 + r 76 -7.8 -3.91352 | overlap 65011 TCATCCTTTCTTCGT TTATGCAATC GAT GATTGCATGG TTTGATTGACGATAT TERM 91 65011 - 65027 + r 75 -9.5 -3.02166 | overlap 65008 TCCTTTCTTCGTTTA TGCAATC GAT GATTGCA TGGTTTGATTGACGA ccrA 66357 - 65008 - | cassette chromosome recombinase A TERM 92 66271 - 66289 + g 82 -9.6 -3.6393 | overlap 66270 AATATGATGTTTTTC GGCTATTG CTT CGATAGCC TGTTTCTGTGCTGCA TERM 93 66412 - 66438 + r 87 -10.9 -3.40565 | opp_overlap 66413, overlap 66398 66413 ATGAATTGATATATA AGCCCAACATC AATAA GATGTTGGGCG TTCATATTAGTCATT TERM 94 66413 - 66437 + r 100 -14.4 -2.63616 | opp_overlap 66413, overlap 66412 66398 TGAATTGATATATAA GCCCAACATC AATAA GATGTTGGGC GTTCATATTAGTCAT TERM 95 66437 - 66413 - R 100 -14.4 -3.61983 | opp_overlap 66413 66412 66398 TGAATTGATATATAA GCCCAACATC AATAA GATGTTGGGC GTTCATATTAGTCAT SAV0063 68384 - 66591 - | hypothetical protein TERM 96 68284 - 68297 + g 70 -2.3 -5.27335 | overlap 68293 GCGATTTCAACTTCA GTAGG CATT CCTCC TTTTTCTTTGGGAGG SAV0064 68680 - 68384 - | hypothetical protein TERM 97 68859 - 68844 - R 95 -6.1 -5.86976 | opp_overlap 68844 68843 TGACAAAATAAAAAA CGCTG ATTTAA CAGCG CTTTAAATAAAAATT SAV0065 69919 - 68873 - | hypothetical protein TERM 98 70132 - 70108 - R 71 -2.1 -5.4588 | overlap 70111 70113 CAAAATTATAAAAAA GAACACCTATC ATC GATAGGCACTG AACCCCTAAAACGGG TERM 99 70129 - 70111 - R 75 -6 -4.75967 | overlap 70108 70113 AATTATAAAAAAGAA CACCTATC ATC GATAGGCA CTGAACCCCTAAAAC TERM 100 70127 - 70113 - R 82 -8.6 -3.96386 | overlap 70111 70108 TTATAAAAAAGAACA CCTATC ATC GATAGG CACTGAACCCCTAAA TERM 101 70170 - 70214 + r 100 -16.7 -5.16151 | opp_overlap 70182 TAAAAACACCATGTT CTAGGCTATTAATTCTCTGTA TTT TACAGGGGATAAGTAGCCTAG TTTTTGTTGAATTTG tnp 70547 - 70170 - | transposase TERM 102 70353 - 70400 + g 100 -9.3 -5.08601 | gap 1 GAAACTTTCTATCGG GGCGTTATCGGCAG-GTGTTCC CTTTC GGGACATACTTCTGATAATGCC TTTTTCTTCGCATAA tnp 71012 - 70659 - | transposase TERM 103 70756 - 70741 - G 71 -7.6 -3.60098 | opp_overlap 70741 ACTCGGCAGTTCAAA TGATGC TTCT GCATCA TTCTCTGTACTCTCT TERM 104 70741 - 70756 + g 71 -7.6 -3.63762 | opp_overlap 70741 ACTCGGCAGTTCAAA TGATGC TTCT GCATCA TTCTCTGTACTCTCT SAV0068 71311 - 70997 - | transposase TERM 105 71361 - 71320 - R 74 -3.3 -5.36441 | TTTTCATAGAAAAAA CACCTCCGTATG-ATTCAT TTTAAT ATGAATTCA-ACGAAAGTG TTTTTATATAATTCC SAV0069 72406 - 71822 - | hypothetical protein TERM 106 72941 - 72906 - R 80 -8.7 -3.75519 | opp_overlap 72939, overlap 72914 72939 AATAAAGATAGAGAA TTATTAAATTGTTTT TGATAT AAAACAACTTAATAA AAAATTTAATTTTAG TERM 107 73139 - 73151 + r 72 -7.7 -3.59468 | ACAGGTGTTAAGTTG CTCCA ATA TGGAG TTGTCGTCTTGTTTT TERM 108 73159 - 73178 + r 70 -5.1 -4.65916 | ATATGGAGTTGTCGT CTTGTTT TATATT AAACAAG TTTTATTCAAATACA TERM 109 73455 - 73421 - R 74 -7.9 -3.85603 | gap 1, opp_overlap 73423, overlap 73419 73423 GTTATCAAATAAATA TATCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGATT TTATTGTTAGTTATT TERM 110 73423 - 73453 + r 100 -12.7 -4.95167 | gap 1, opp_overlap 73423 73421 73419 TATCAAATAAATATA TCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGA TTTTATTGTTAGTTA TERM 111 73453 - 73423 - R 83 -10.5 -3.50491 | gap 1, opp_overlap 73423, overlap 73421 73419 TATCAAATAAATATA TCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGA TTTTATTGTTAGTTA kdpE 74165 - 73470 - | transcription regulator protein kdpE TERM 112 73756 - 73736 - GR 74 -9.1 -2.8474 | opp_overlap 73736, overlap 73733 GTTCATTGACAAGGA CTGATTTCG CAT CGAAATCAA TGGTTAATGGACCAT kdpD 76773 - 74140 - | sensor protein KdpD TERM 113 76104 - 76116 + gH 74 -9.1 -2.87026 | TGCCGCTGATAGCTA CCGCA ATA TGCGG TGTAATGTCGGTATG TERM 114 77162 - 77176 + G 80 -7.2 -4.47707 | TTGCTTTAAATGTGC CATCTA AAA TAGATG TTGTTTTTAATCCGA truncated-kdpA 77077 - 78753 + | potassium-transporting ATPase subunit A TERM 115 79265 - 79228 - g 89 -12.2 -3.18735 | opp_overlap 79240 GCAACAGTGGATGAA TCTGCGATTACAGGTG AATCTG CACCTGTAATCAAAGA AAGCGGTGGAGATTT TERM 116 80039 - 80029 - g 83 -6.8 -5.00616 | opp_overlap 80030 GGGGTGTCTAAAAAA GGTG GCA CACC GCTGGTTGTGCTTGA kdpB(SCCmec) 78772 - 80793 + | potassium-transporting ATPase B chain-like protein TERM 117 81166 - 81176 + G 72 -8.2 -3.41414 | opp_overlap 81165 AAAATTTCAAGTGAT GCGG TGA CCGC TTCTGGCTCTGGTTT kdpC(SCCmec) 80842 - 81366 + | potassium-transporting ATPase C chain-like protein TERM 118 81776 - 81806 + T 100 -9.8 -5.00412 | opp_overlap 81775 81778 TTAAAGAAAGTGAAG GAGATTAAGCAATG TAA CTTGGCTTAATCTC TTTTTGATTATATTT SAV0075 82780 - 81911 - | hypothetical protein SAV0076 83692 - 82790 - | hypothetical protein SAV0077 83728 - 83853 + | hypothetical protein SAV0078 84365 - 83886 - | hypothetical protein TERM 119 84013 - 84024 + g 74 -2.2 -5.43514 | overlap 84011 GAATTAAGGGTAGGG TAGG TATG CCTG TTTTTTGGTTCTTTT SAV0079 84760 - 84428 - | hypothetical protein SAV0080 85431 - 84805 - | hypothetical protein SAV0081 85546 - 87054 + | hypothetical protein TERM 120 87092 - 87073 - f 82 -10.8 -2.53012 | overlap 87072 AACCTCATCATTAAC TGATACGC AGAG GCGTATCA TAAGTAAAACTAAAA SAV0082 87653 - 89386 + | hypothetical protein TERM 121 89465 - 89445 - T 80 -6.9 -4.84602 | opp_overlap 89445 ACACAAACAAACAAA GGAGGAA ACTTAAA TTCCTCC TTTCCCTTATTACTC SAV0083 89908 - 89570 - | hypothetical protein TERM 122 89976 - 89966 - R 79 -5.4 -5.1925 | opp_overlap 89966 CTAGAATTGAAAAAA CTTG TTA CAAG TGCATTTTCGTTCAG SAV0084 91085 - 90330 - | hypothetical protein SAV0085 91345 - 91085 - | hypothetical protein TERM 123 91429 - 91399 - H 79 -7.1 -4.44187 | gap 1, opp_overlap 91399 91408, overlap 91400 91401 ATAGATAAACACAAA TGTGTCAAATACCC CTAG AGGTATTTGACA-A GTTCCATTCAACCGT TERM 124 91429 - 91400 - H 74 -8.7 -3.24885 | opp_overlap 91399 91408, overlap 91399 91401 TAGATAAACACAAAT GTGTCAAATACCC CTAG AGGTATTTGACAA GTTCCATTCAACCGT TERM 125 91428 - 91401 - H 100 -12.2 -2.53847 | opp_overlap 91399 91408, overlap 91399 91400 AGATAAACACAAATG TGTCAAATACCC CTAG AGGTATTTGACA AGTTCCATTCAACCG TERM 126 92131 - 92121 - g 71 -6.8 -4.15657 | opp_overlap 92117 92116, overlap 92117 GGAGAATTAGACAAA GCTG TAG CAGC ATTGATTATTGCAAA TERM 127 92251 - 92240 - g 70 -4.4 -4.67234 | AGTTAATGTTAAAAA GCAA GGTA TTGC AAAAATGTTTGATTT TERM 128 92387 - 92357 - g 73 -4.1 -4.88407 | overlap 92363 CTACGTAATGAAAAA GAAAAATGTTGAT TCATT ACCAACACTTATC AATCAAGCTATTGAG TERM 129 92381 - 92363 - g 84 -3.9 -5.67529 | overlap 92357 AATGAAAAAGAAAAA TGTTGAT TCATT ACCAACA CTTATCAATCAAGCT SAV0086 91482 - 92546 + | hypothetical protein SAV0087 92577 - 93911 + | hypothetical protein SAV0088 93930 - 95123 + | sulfide-quinone reductase TERM 130 95175 - 95159 - T 82 -6.7 -4.86621 | opp_overlap 95159 ATTTTTAATGAAAAA TCTTTTA CTA TAAAAGA TTAAGTATTTAAATG TERM 131 95358 - 95317 - T 100 -13.4 -4.48449 | gap 1, opp_overlap 95317 TTATGAAAATAGAAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATCATCTCACTGCTG TTTTTTAAAGGTTTA TERM 132 95317 - 95358 + T 100 -11.2 -5.07107 | gap 1, opp_overlap 95317 TTATGAAAATAGAAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATCATCTCACTGCTG TTTTTTAAAGGTTTA TERM 133 95575 - 95585 + T 89 -4 -5.95166 | TTTAATTTCATAATG TGTT GTA AACA TTTTTTTTGATTGGA SAV0089 96776 - 95790 - | hypothetical protein SAV0090 97085 - 97288 + | hypothetical protein SAV0091 97337 - 97633 + | hypothetical protein SAV0092 97832 - 98443 + | hypothetical protein TERM 134 98450 - 98471 + F 75 -4.4 -5.21709 | GAAAGATAATTAAGG GAGTGCTC ATTCAG GAGTGCTC TTTTTTGATGTCCAA TERM 135 101517 - 101505 - g 70 -4.1 -4.77896 | TAAGGAAGGTAAAAA TGAAC CGA GCTCA TTTGTAATATCGCCT SAV0093 98710 - 101862 + | hypothetical protein SAV0094 101919 - 102401 + | hypothetical protein TERM 136 102408 - 102434 + F 86 -7.3 -5.20154 | opp_overlap 102408 AAAAAATAACGATAA GGAGCTGGC GATTATAAA GCTAGCTCC TTTTTTAACTTATAT plc 102607 - 103593 + | 1-phosphatidylinositol phosphodiesterase precurosr TERM 137 103659 - 103614 - f 80 -10.1 -3.35176 | gap 1, opp_overlap 103616, overlap 103616 103628 CAATAATGATATTAA GACGAGTA-TGAAAATAGTTAG ATT CTAATTATTTTCACTACTCGTT TTTATTTTGAAAATA TERM 138 103616 - 103657 + F 100 -14.9 -5.45802 | gap 1, opp_overlap 103614 103616 103628 ATAATGATATTAAGA CGAGTA-TGAAAATAGTTAG ATT CTAATTATTTTCACTACTCG TTTTTATTTTGAAAA TERM 139 103657 - 103616 - f 100 -12.7 -3.2326 | gap 1, opp_overlap 103616, overlap 103614 103628 ATAATGATATTAAGA CGAGTA-TGAAAATAGTTAG ATT CTAATTATTTTCACTACTCG TTTTTATTTTGAAAA SAV0096 103814 - 104584 + | hypothetical protein TERM 140 104754 - 104742 - g 77 -4.9 -5.18866 | CGGAAATAAAGAAAA GTTTT GAA AAAAC GTTGAGTATGTATCC SAV0097 104636 - 105406 + | hypothetical protein TERM 141 105589 - 105577 - g 77 -4.9 -5.18866 | CGGAAATAAAGAAAA GTTTT GAA AAAAC ATTGAGTATGTATCC SAV0098 105474 - 106241 + | hypothetical protein SAV0099 106306 - 107076 + | hypothetical protein TERM 142 107258 - 107246 - g 77 -4.9 -5.18866 | CGGAAATAAAGAAAA GTTTT GAA AAAAC ATTGAGTATGTATCC SAV0100 107143 - 107910 + | hypothetical protein SAV0101 108007 - 110244 + | hypothetical protein TERM 143 110257 - 110285 + F 95 -7.6 -5.47159 | opp_overlap 110247 110257 TAAAATGATCACAAA TCACAAATTTTG ATATA CATAATTTGTGA TTTTTTATATTCAAA TERM 144 110285 - 110257 - f 77 -7.6 -4.05816 | opp_overlap 110257, overlap 110247 TAAAATGATCACAAA TCACAAATTTTG ATATA CATAATTTGTGA TTTTTTATATTCAAA SAV0102 110395 - 111573 + | aminoacylase TERM 145 112334 - 112322 - g 79 -4.1 -5.25803 | AATGTTGAGAAAAAA GTAGA TAA TCCAC TTATTGATTTTAAAT SAV0103 111575 - 112963 + | major facilitator transporter TERM 146 113094 - 113135 + T 84 -9 -4.29073 | gap 1, opp_overlap 113097, overlap 113097 ATAAATATAAATGAA AAACCATCCACTTAAACTT TTGAT AAGTT-AGGTGGATGGTTA TTTATTGCGTTGTTC TERM 147 113132 - 113097 - T 93 -8.5 -5.08367 | gap 1, opp_overlap 113094 113097 AATATAAATGAAAAA CCATCCACTTAAACTT TTGAT AAGTT-AGGTGGATGG TTATTTATTGCGTTG TERM 148 113097 - 113132 + T 100 -10.7 -4.2416 | gap 1, opp_overlap 113097, overlap 113094 AATATAAATGAAAAA CCATCCACTTAAACTT TTGAT AAGTT-AGGTGGATGG TTATTTATTGCGTTG TERM 149 113385 - 113361 - T 90 -6.5 -5.63517 | opp_overlap 113361 TTGCTAAACAAAAAA GCCAATCCA TTGATGT TGGATTGAC CTTGTATATGCCTCT SAV0104 115114 - 113447 - | transport protein TERM 150 113981 - 114001 + g 89 -6.9 -5.38321 | overlap 113977 AACAGCTTGGTGCTT TTGTTCAAG CTT CTTGATCAA TTTTTTATCGTCTTT SAV0105 115376 - 115206 - | hypothetical protein SAV0106 117208 - 115433 - | 67 kDa Myosin-crossreactive streptococcal antigen-like protein SAV0107 118254 - 117382 - | drug/metabolite exporter family protein TERM 151 119171 - 119158 - g 76 -2.5 -5.50723 | TGAGCAAAAGAAAAA TATAA TTAC TTATA GCGAAAGACATAATA TERM 152 119191 - 119219 + G 75 -4.7 -4.87803 | opp_overlap 119206, overlap 119201 AAGACATAATATTCC TATCATTGAAGAT GAT ATCTTTAGAGATA TTTTCTTTAGCGATC SAV0108 118436 - 119764 + | hypothetical protein SAV0109 119954 - 120427 + | hypothetical protein TERM 153 120423 - 120411 - f 74 -6.3 -4.49337 | CTACAATTCACAAAA TGAGA GAT TCTCA ATAAAAATATAAACT TERM 154 121029 - 121048 + G 70 -3.6 -4.86731 | opp_overlap 121029 CAGAGGACCAAAGAA TCCAACTA TTAT TAATTGGA TTTTGTTTCAACGCA lctP 120689 - 122281 + | L-lactate permease-like protein TERM 155 122295 - 122316 + T 70 -5.9 -4.26019 | AAATATAAATAATGT TGTCACTTG GATT CAAATGACA TTTTAAATCTAATTA TERM 156 122381 - 122340 - T 81 -10.4 -3.20435 | gap 1, opp_overlap 122340, overlap 122345 CTAATTATTCATGAA TCGAACTAGTACGAAATGC AATGA GCATCTTGT-CTAGTTCGA TTTTTTAATGTCTAA TERM 157 122340 - 122381 + T 100 -10.4 -5.24989 | gap 1, opp_overlap 122340 122345 CTAATTATTCATGAA TCGAACTAGTACGAAATGC AATGA GCATCTTGT-CTAGTTCGA TTTTTTAATGTCTAA TERM 158 122506 - 122475 - T 100 -12.5 -5.85244 | gap 1, opp_overlap 122475 AAGTAAAATAAAAAA TGCACTGAGCAACA AAAGA TGTTGCTC-GTGCA TTTAGATGATTCTTA TERM 159 122475 - 122506 + T 100 -12.5 -3.74056 | gap 1, opp_overlap 122475 AAGTAAAATAAAAAA TGCACTGAGCAACA AAAGA TGTTGCTC-GTGCA TTTAGATGATTCTTA spa 123962 - 122610 - | immunoglobulin G binding protein A precursor TERM 160 123182 - 123199 + g 80 -7.1 -4.50627 | GAGCATCGTTTAGCT TTTTAGC TTCT GCTAAAA TTTCTTTGCTCACTG TERM 161 124371 - 124339 - R 93 -8.5 -5.06052 | TTAAAAAATAGAAAA CACAAGTGCACTTTA GAA TACAGCACACTTGCG TAATAGAGATATTAT sarH1 125135 - 124383 - | accessory regulator A-like protein TERM 162 125481 - 125433 - R 76 -2.6 -5.65177 | gap 2, opp_overlap 125431 125443 ATATGTATAAAAAAA CCTCGCAACTGTTAGTTAACTGAA TCA TTTAGCTAACTT-C-GTTGTGAGG TCATTTTGTTTTAAT sirC 126421 - 125504 - | lipoprotein sirB 127494 - 126499 - | lipoprotein TERM 163 127378 - 127409 + g 79 -9.4 -3.39732 | opp_overlap 127378 127369, overlap 127376 ATCAAAGTTGAATAA CGCCTGTATCACCG TACC TGGTGACACAAGCG TATTTCCAATCATTA TERM 164 127409 - 127378 - G 95 -13.1 -3.71321 | opp_overlap 127376 127378, overlap 127369 ATCAAAGTTGAATAA CGCCTGTATCACC GTACCT GGTGACACAAGCG TATTTCCAATCATTA sirA 128502 - 127510 - | lipoprotein TERM 165 128660 - 128682 + H 73 -8.6 -3.05384 | opp_overlap 128659 TATAATCCTAATTAC TTGATAGTGA GAA TCATTATCAA TTAGGTAACACACAA TERM 166 129345 - 129330 - g 74 -5.4 -4.72545 | AGAAAAATAAAAGAA GTGCAT CCAA ACGCAC AAATTGTTGCTGTTG SAV0116 128733 - 129713 + | cysteine synthase A protein SAV0117 129710 - 130720 + | ornithine cyclodeaminase protein SAV0118 130741 - 132495 + | hypothetical protein SAV0119 132488 - 133744 + | hypothetical protein SAV0120 133734 - 135470 + | hypothetical protein TERM 167 136840 - 136826 - gf 73 -8.6 -3.09635 | AGCGTGAGCATTTAA GTGAAG CAG CTTCAC ACCTGACATTAAAGC SAV0121 135451 - 137229 + | siderophore biosynthesis protein SAV0122 137201 - 137980 + | hypothetical protein SAV0123 137980 - 139182 + | diaminopimelate decarboxylase protein SAV0124 139186 - 139950 + | hypothetical protein TERM 168 140024 - 140063 + F 100 -10.4 -5.28983 | gap 1 TAAAACAATATAGTG TGGAGAACTTTTGATATTT TAT AAATATTGAA-GTTCTCCA TTTTTGTATTTTGCA TERM 169 140540 - 140518 - g 82 -3.4 -5.64274 | overlap 140519 TTAGGTAGAAAAAAA TTAGTAGCTG CAG CAGATACTAC CACTATTCAAAAAAG TERM 170 140539 - 140519 - g 73 -6.9 -3.9748 | overlap 140518 TAGGTAGAAAAAAAT TAGTAGCTG CAG CAGATACTA CCACTATTCAAAAAA SAV0125 140146 - 140772 + | hypothetical protein TERM 171 141221 - 141203 - g 70 -8.2 -3.17319 | opp_overlap 141211, overlap 141201 141207 TTTAACGCAGTAAGA CAAACTGC CGC GCAATTTG GCGATTTCCATGTCA butA 140984 - 141760 + | acetoin reductase TERM 172 141821 - 141786 - T 76 -6.3 -4.57482 | opp_overlap 141786 TTAGCGATAAATAAA TCCTTATTGTTAAGT TTAATC ACTTAGCAGTAAGGA TTTTTTAGTGCACTT TERM 173 141786 - 141821 + T 100 -10.7 -5.16237 | opp_overlap 141786 TTAGCGATAAATAAA TCCTTATTGTTAAGT TTAATC ACTTAGCAGTAAGGA TTTTTTAGTGCACTT SAV0127 141961 - 141809 - | hypothetical protein SAV0128 142105 - 143076 + | NAD-dependent epimerase/dehydratase family protein SAV0129 143039 - 143731 + | capsular polysaccharide biosynthesis SAV0130 143941 - 145107 + | hypothetical protein SAV0131 145088 - 146326 + | hypothetical protein SAV0132 146316 - 147746 + | hypothetical protein sodM 148014 - 148613 + | superoxide dismutase TERM 174 148634 - 148658 + F 95 -7.9 -5.38249 | CTTAATATAATTGAG GTGGAGCATTT ACA AGGTGTTCCAC TTTTTTGTACTTAAT TERM 175 149611 - 149589 - g 82 -3.4 -5.59655 | overlap 149590 CAAAGTAACAAAAAA GTTTTACCAG CTG CTGGTGAAAG TATGACATCAAGTAT TERM 176 149610 - 149590 - g 73 -6.9 -3.93353 | overlap 149589 AAAGTAACAAAAAAG TTTTACCAG CTG CTGGTGAAA GTATGACATCAAGTA SAV0134 148980 - 149705 + | hypothetical protein TERM 177 149744 - 149788 + T 100 -16.7 -3.66784 | gap 1, overlap 149745 149748 AAATCGTGTGATTAT C-TGAGCGAGCCTAGGACAT AAATCA ATGTCCTAGGCTCGCTAATG TTATATTGGCAGTAG TERM 178 149745 - 149786 + T 100 -20.4 -3.41292 | overlap 149744 149748 AATCGTGTGATTATC TGAGCGAGCCTAGGACAT AAATCA ATGTCCTAGGCTCGCTAA TGTTATATTGGCAGT TERM 179 149748 - 149783 + T 100 -22.1 -2.85947 | overlap 149745 149744 CGTGTGATTATCTGA GCGAGCCTAGGACAT AAATCA ATGTCCTAGGCTCGC TAATGTTATATTGGC TERM 180 149822 - 149834 + T 82 -7.7 -4.42851 | ACTGAATGAAATTGC GCTTG TAA CAAGC TTTTCCATTTCTTAC SAV0135 150636 - 149896 - | hypothetical protein pnp 150887 - 151594 + | purine nucleoside phosphorylase SAV0137 151601 - 152953 + | transmembrane protein dra 153034 - 153696 + | deoxyribose-phosphate aldolase drm 153724 - 154902 + | phosphopentomutase TERM 181 154967 - 154926 - T 100 -16.1 -4.96762 | opp_overlap 154926 TAGATATTATAAAAA CAGCAGTGAAGTTAACTAT AACA ATAGTTTTCTTCACTGCTG TTTTTATTATAATAG TERM 182 154926 - 154967 + T 100 -16.1 -5.22006 | opp_overlap 154926 TAGATATTATAAAAA CAGCAGTGAAGTTAACTAT AACA ATAGTTTTCTTCACTGCTG TTTTTATTATAATAG SAV0140 155846 - 155031 - | phosphonates transport permease SAV0141 156643 - 155843 - | phosphonates transport permease TERM 183 156573 - 156620 + g 79 -8 -4.0056 | opp_overlap 156573 156579 156595, overlap 156618 ATGATTAACATGAAG GTAAAACTCGTTTTTAAAGAAA CCTT TTTCTTTAAAAGGGAGTCATAC TTTGTAGGTATTTCT TERM 184 156614 - 156579 - G 81 -7.8 -4.31688 | opp_overlap 156573, overlap 156573 156595 AACATGAAGGTAAAA CTCGTTTTTAAAGAAA CCTT TTTCTTTAAAAGGGAG TCATACTTTGTAGGT SAV0142 157418 - 156645 - | transport system protein SAV0143 158569 - 157613 - | alkylphosphonate ABC transporter SAV0144 158798 - 160342 + | hypothetical protein TERM 185 160554 - 160578 + G 76 -6.5 -4.58213 | TTTTAAAATAGATAA TGGTGATTTTT TGC AAGGGTCACCA TTTTGTAATTACTTA SAV0145 160393 - 161928 + | 2'-3'-cyclic-nucleotide 2'-phosphodiesterase TERM 186 161944 - 161967 + F 95 -6.8 -5.77734 | opp_overlap 161944 CGGATATATGAAAAA CTTACTTGAT TTTA ATCGGGTAAG TTTTTGTTTTTGTTT SAV0146 162085 - 162852 + | hypothetical protein SAV0147 162858 - 164033 + | transcription regulator TERM 187 164051 - 164083 + F 100 -14.3 -5.71712 | opp_overlap 164051 CACCAATATTTAAAA CTCGAGCTGAAAAGA TCA TCATTTCAGTTCGAG TTTTTTTGTGTAACA TERM 188 164083 - 164051 - f 100 -12.1 -4.29325 | opp_overlap 164051 CACCAATATTTAAAA CTCGAGCTGAAAAGA TCA TCATTTCAGTTCGAG TTTTTTTGTGTAACA TERM 189 165342 - 165328 - g 76 -2.8 -5.5604 | opp_overlap 165328 TGAATGAACAAAAAA CAGG TATTAAG CCTG ATATTGTCGGTAAAT adhE 164418 - 167027 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 190 167095 - 167121 + F 83 -6.6 -5.09762 | CCACATAAACTTTAA GTCGATAATCAT TTT ACGGTTATCGGC TTTTATTTATTGCCA TERM 191 167784 - 167767 - g 76 -4.1 -5.04987 | opp_overlap 167756, overlap 167756 167769 AAGATTCGGAAAAAA TTGCGAA TAGC TTCGCTA AAGTTACAAGTAAAC capA 167370 - 168038 + | capsular polysaccharide synthesis enzyme Cap5A capB 168054 - 168740 + | capsular polysaccharide synthesis enzyme Cap5B capC 168743 - 169507 + | capsular polysaccharide synthesis enzyme Cap8C TERM 192 171195 - 171183 - g 71 -6.3 -4.25056 | overlap 171188 GAGCTTATGAATAAA GATGA GGT TCATC CTGAACAAGTATTTG capD 169527 - 171350 + | capsular polysaccharide synthesis enzyme Cap5D capE 171340 - 172368 + | capsular polysaccharide synthesis enzyme Cap8E capF 172381 - 173490 + | capsular polysaccharide synthesis enzyme Cap5F capG 173494 - 174618 + | capsular polysaccharide synthesis enzyme Cap5G TERM 193 175174 - 175164 - g 70 -4 -4.85195 | AAAACAATTGAAAAA CTTT TGG AAAG CAAGTGGTGGGAGAA capH 174621 - 175247 + | capsular polysaccharide synthesis enzyme O-acetyl transferase Cap5H capI 175252 - 176361 + | capsular polysaccharide synthesis enzyme Cap5I capJ 176375 - 177541 + | capsular polysaccharide synthesis enzyme Cap5J TERM 194 178015 - 178032 + G 75 -4.9 -4.87892 | opp_overlap 178018 TATTTCTATATTATT TAATCCA AAAC TGGATTG TTTGTTTTATTACCA capK 177534 - 178739 + | capsular polysaccharide synthesis enzyme Cap5K capL 178740 - 179945 + | capsular polysaccharide synthesis enzyme Cap5L capM 179956 - 180513 + | capsular polysaccharide synthesis enzyme Cap5M TERM 195 180912 - 180902 - g 71 -5.4 -4.59773 | TGGTATTTCCAAAAA GTTC GCT GAAC AAGCATTACAAGAGT capN 180513 - 181400 + | capsular polysaccharide synthesis enzyme Cap5N capO 181454 - 182716 + | capsular polysaccharide synthesis enzyme Cap8O capP 182763 - 183938 + | capsular polysaccharide synthesis enzyme Cap5P isdI 184329 - 184003 - | heme-degrading monooxygenase IsdI SAV0166 184719 - 184336 - | hypothetical protein aldA 185146 - 186633 + | aldehyde dehydrogenase-like protein TERM 196 186773 - 186814 + F 100 -9.7 -4.94972 | opp_overlap 186773 186775, overlap 186775 TAATGACTAAAATAA TAGCAGTAGGATGGTTT TTAATTGC AAATCATCTTACTGCTG TTTTTAATTATGCTA TERM 197 186775 - 186812 + F 91 -10.1 -4.08682 | opp_overlap 186775 186773, overlap 186773 ATGACTAAAATAATA GCAGTAGGATGGTTT TTAATTGC AAATCATCTTACTGC TGTTTTTAATTATGC SAV0168 187280 - 188239 + | cation-efflux system membrane protein CzcD TERM 198 188325 - 188337 + T 90 -7.7 -5.1925 | opp_overlap 188324 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SAV0169 188504 - 188349 - | hypothetical protein TERM 199 188424 - 188405 - G 77 -9.3 -3.20164 | CTACAGGCAATGCAA GTTGGGG TGTGGG CCCCAAC AAAGAGAAATTGGAT TERM 200 188451 - 188428 - G 71 -6.8 -4.15044 | opp_overlap 188434, overlap 188430 188434 GTGGGCCCCAACAAA GAGAAATTGG ATTC CCAATTTCTA CAGACAATGCAAGTT TERM 201 188449 - 188430 - G 80 -9.4 -3.6761 | opp_overlap 188434, overlap 188428 188434 GGGCCCCAACAAAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG SAV0170 188737 - 188534 - | hypothetical protein SAV0171 188916 - 189428 + | hypothetical protein TERM 202 189694 - 189714 + F 86 -9.7 -3.71645 | opp_overlap 189694 CAATTCACGATATAA GGGCTGTGT TTG GCATAGCCC TTTAGATATACACTT SAV0172 189770 - 190510 + | hypothetical protein SAV0173 190524 - 191495 + | hypothetical protein SAV0174 191492 - 192253 + | hypothetical protein TERM 203 192431 - 192448 + G 77 -4.9 -5.02323 | GAAGCTGTATCGCAG TCTTGTT TGAC AACAGGA TTTTGTTTATGGTGC SAV0175 192266 - 193297 + | hypothetical protein SAV0176 193523 - 193873 + | hypothetical protein fdh 193948 - 195072 + | formate dehydrogenase TERM 204 195134 - 195160 + F 93 -5.9 -5.71983 | overlap 195123 TGAATCATATAAGCA CTACTGCTGTT GTAAA GATGGCAGTAG TTTTTTTATGATTAC SAV0178 195458 - 196708 + | integral membrane protein LmrP TERM 205 198040 - 198052 + G 71 -7.7 -3.6502 | TCGCAATTACAGTGC GCGAA GTC TTCGC TTTCACTAGAGACTA TERM 206 202038 - 202052 + G 70 -7.2 -3.84027 | opp_overlap 202036, overlap 202036 CGACAATGAAGTATT TTTGCA ACA TGCAAA TATTGTTTTTGATGC SAV0179 197155 - 204330 + | surfactin synthetase SAV0180 204343 - 204987 + | hypothetical protein TERM 207 205299 - 205249 - T 81 -7.2 -4.67982 | gap 1 TGTCAGTTAATAAAA TAACGTGAGCATCA-ATCATCAT ACTCAA ACGATGATTTAAAACTCACGTTA ATGTTAGTCAGTGTA SAV0181 205809 - 205315 - | hypothetical protein SAV0182 206828 - 206064 - | hypothetical protein argJ 208085 - 206844 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein argC 209128 - 208097 - | N-acetyl-gamma-glutamyl-phosphate reductase SAV0185 210351 - 209167 - | ornithine aminotransferase TERM 208 210064 - 210089 + g 76 -2.7 -5.4756 | gap 1 GTTAAGGGAGAGTAC TTTGTCTTTCTT AGC AAGAT-GACAAA TTTTTTCTTCCCATT TERM 209 210564 - 210598 + r 100 -13 -2.83732 | opp_overlap 210564, overlap 210561 210559 210596 AGTATGAATAAAAAA TGCCACAAGCATATGT TTA ACATATGACTGTGGCA TAGTATTATGCTTAT TERM 210 210598 - 210564 - R 100 -15.2 -5.52023 | opp_overlap 210564 210561 210559 210596 AGTATGAATAAAAAA TGCCACAAGCATATGT TTA ACATATGACTGTGGCA TAGTATTATGCTTAT SAV0186 211959 - 210610 - | branched chain amino acid ABC transporter carrier protein TERM 211 212230 - 212198 - R 83 -7.7 -4.65263 | opp_overlap 212194 212198 212199, overlap 212200 ACTTTGTAAAATAAA GATACCCCCTTCAAC ATG ATCGAAGGGGGTAAG TGTATGTTTAGTTCA TERM 212 212228 - 212200 - R 100 -14.7 -3.93868 | opp_overlap 212199 212198 212194, overlap 212198 TTTGTAAAATAAAGA TACCCCCTTCAAC ATG ATCGAAGGGGGTA AGTGTATGTTTAGTT SAV0187 212735 - 212238 - | hypothetical protein SAV0188 214502 - 212862 - | putative indole-3-pyruvate decarboxylase TERM 213 214727 - 214760 + r 82 -8.9 -3.96892 | gap 1, opp_overlap 214727, overlap 214759 ATAGCAAAGAAAAAA CAGGCGCGT-CACCTT ATG AAGGTATACGCACCTG TTTATAGTAAGCATT TERM 214 214760 - 214727 - R 100 -13.3 -5.69793 | gap 1, opp_overlap 214727 214759 ATAGCAAAGAAAAAA CAGGCGCGT-CACCTT ATG AAGGTATACGCACCTG TTTATAGTAAGCATT glcA 216819 - 214774 - | PTS enzyme II TERM 215 215120 - 215106 - G 73 -8.6 -3.15579 | opp_overlap 215096 215106 215111 TGAATGGTGCACGAA CTTCAC CTT GTGAAG GTTTAATAGCGATAC TERM 216 216922 - 216868 - H 81 -4.5 -5.49234 | gap 2, opp_overlap 216879 216880 216883 216884, overlap 216880 216884 AGATTCAATAAAAAA GACACGAG-CAAA-TAGACTGTGTTGG TAA CCATCACAGCTTAATTTAACTCATGCC TAATCTTACTTAGTA TERM 217 216884 - 216904 + H 76 -9.7 -2.72591 | opp_overlap 216880 216868 216884, overlap 216883 216880 216879 ACACGAGCAAATAGA CTGTGTTGG TAA CCATCACAG CTTAATTTAACTCAT TERM 218 216904 - 216884 - H 80 -9.7 -3.31564 | opp_overlap 216884 216883 216880 216879, overlap 216880 216868 ACACGAGCAAATAGA CTGTGTTGG TAA CCATCACAG CTTAATTTAACTCAT SAV0190 217404 - 218459 + | hypothetical protein murQ 218456 - 219355 + | N-acetylmuramic acid-6-phosphate etherase TERM 219 219454 - 219434 - g 77 -9.8 -3.13191 | overlap 219432 TGGATAATATAGATA GTGTCATG AACTG CATGACAC GTGTGCGTATTAAAG SAV0192 219367 - 220821 + | PTS system sucrose-specific IIBC component SAV0193 220824 - 221699 + | RpiR family transcription regulator TERM 220 221851 - 221874 + T 100 -10.4 -5.1675 | opp_overlap 221851 GCGTGACAAATTAAA GCAAAGTTCA GGTT TGAGCTTTGC TTTTTTCATAGATGG TERM 221 221874 - 221851 - T 81 -8.2 -4.13995 | opp_overlap 221851 GCGTGACAAATTAAA GCAAAGTTCA GGTT TGAGCTTTGC TTTTTTCATAGATGG SAV0194 222174 - 221893 - | hypothetical protein TERM 222 223744 - 223734 - g 77 -5.4 -4.86385 | overlap 223720 ACTTTTAAAAATAAA GCTT TAA AAGC AGAAGATAACAGCAT TERM 223 223953 - 223943 - g 79 -5.4 -5.10461 | GCGACTTAACAAAAA GTTG GAA CAAC CGTTAACGATAGCTG TERM 224 224070 - 224080 + G 71 -5.4 -4.56597 | opp_overlap 224070 GATTATAATAAAAAG TTCG AGA CGAA TTTTTCAACAGACAC hsdR 222387 - 225176 + | type I restriction enzyme restriction chain TERM 225 225183 - 225212 + T 88 -9.3 -4.15884 | gap 1, overlap 225184 GGTGTGTAATGATTC AGCCCCCT-CGCTA GAT TAGTGTAGGGGGCA TTATTATTTCATTAG TERM 226 225184 - 225211 + T 100 -12.8 -3.08446 | gap 1, overlap 225183 GTGTGTAATGATTCA GCCCCCT-CGCTA GAT TAGTGTAGGGGGC ATTATTATTTCATTA SAV0196 225922 - 225323 - | hypothetical protein SAV0197 226048 - 227160 + | hypothetical protein SAV0198 227157 - 227837 + | ABC transporter ATP-binding protein SAV0199 227834 - 229012 + | SA0193/BacI-like protein SAV0200 229219 - 229440 + | hypothetical protein TERM 227 229490 - 229465 - f 78 -9.1 -3.224 | opp_overlap 229465, overlap 229463 229453 229448 229487 TAATTCTTTATAAGA GAGGCTTTC TTTTTTGG GAAAGCCTC TTTTTAAAAAAGGAG TERM 228 229465 - 229490 + F 100 -10.5 -4.56597 | opp_overlap 229465 229463 229453 229448 229487 TAATTCTTTATAAGA GAGGCTTTCTT TTTT GGGAAAGCCTC TTTTTAAAAAAGGAG SAV0201 229478 - 231196 + | hypothetical protein SAV0202 231255 - 231698 + | hypothetical protein TERM 229 232117 - 232140 + G 70 -8.3 -3.29142 | opp_overlap 232120, overlap 232120 TTTTTCAAGTGGTAT GAAGCAAAA ACTAAA TTTTGCTTC TATGTTATTAGTAGA TERM 230 232387 - 232371 - g 73 -7.3 -3.93556 | opp_overlap 232371, overlap 232366 AGTCATTTAATCAAA CCACGTT AGA AACATGG TTGTTAGAAAGTCAA SAV0203 231710 - 232432 + | hypothetical protein TERM 231 232519 - 232536 + G 72 -4.9 -4.80487 | AATTTTTTACATATG TAGTTGG TTTC CCAATTA TTTATTTTGGTTATA SAV0204 232419 - 232595 + | hypothetical protein TERM 232 233112 - 233078 - T 100 -9.4 -4.56159 | gap 1, opp_overlap 233081, overlap 233081 CTAATAAAATATAAA TAATCCCCCG-CACT TCACAT AGTGGCGGGGGATTT ATTCTGGCGTCAAAA TERM 233 233081 - 233109 + T 100 -11.1 -4.32177 | gap 1, opp_overlap 233081 233078 ATAAAATATAAATAA TCCCCCG-CACT TCACAT AGTGGCGGGGGA TTTATTCTGGCGTCA TERM 234 233109 - 233081 - T 100 -11.1 -4.34119 | gap 1, opp_overlap 233081, overlap 233078 ATAAAATATAAATAA TCCCCCG-CACT TCACAT AGTGGCGGGGGA TTTATTCTGGCGTCA oppF 234897 - 233305 - | oligopeptide transport ATP-binding protein TERM 235 234794 - 234820 + g 84 -6.7 -5.055 | opp_overlap 234794 ACAATACCTAGGATA TGTTTTTTTCG TAATT CGAAAGAGACA TTTTTTACCGCTTGA truncated-oppB 234995 - 236332 + | hypothetical protein SAV0207 236338 - 237501 + | hypothetical protein TERM 236 239184 - 239200 + G 73 -8.1 -3.6715 | opp_overlap 239183 239178 ATCAATTTATTAAGT TTTATCG TGG CGATAAA TTTAAAATTGCATCA rlp 237518 - 239293 + | RGD-containing lipoprotein TERM 237 240202 - 240226 + G 71 -7.9 -3.64599 | GATCTGTCGATTACT TGCATCATTTG ATA CAAGCGATGCA TTTAGCATATAGTGA SAV0209 239331 - 241337 + | gamma-glutamyltranspeptidase precursor SAV0210 242423 - 241650 - | hypothetical protein TERM 238 242287 - 242297 + g 77 -5.4 -5.0133 | TTTTTAATAGGATAC GTAC TTA GTAC TTTTTTAAGACCATC TERM 239 242598 - 242573 - R 78 -3.3 -5.62045 | AGATACAATAAAAAA CTGCATGAC GTTGAGGA GTCACACAG TGTAATTAAAAATTT acpD 243238 - 242612 - | azoreductase TERM 240 243547 - 243537 - g 74 -5.4 -4.7173 | opp_overlap 243527, overlap 243527 GATGACATTCAAAAA TGGT TTA ACCA ATATACCGATAAATT SAV0212 243447 - 244025 + | hypothetical protein TERM 241 244101 - 244055 - f 70 -3.8 -5.0538 | opp_overlap 244059, overlap 244059 CCGCAGTCTAAAAAA TTAAGCAATCATTGTGTGAGTA TGA TACTTACATAATGGTTGCTTTT TTCAATGAAAATCGT TERM 242 244097 - 244059 - f 82 -9 -3.93769 | opp_overlap 244059, overlap 244055 AGTCTAAAAAATTAA GCAATCATTGTGTGAGTA TGA TACTTACATAATGGTTGC TTTTTTCAATGAAAA TERM 243 244059 - 244097 + F 100 -15.6 -5.08824 | opp_overlap 244055 244059 AGTCTAAAAAATTAA GCAATCATTGTGTGAGTA TGA TACTTACATAATGGTTGC TTTTTTCAATGAAAA msmX 244409 - 245506 + | multiple sugar-binding transport ATP-binding protein SAV0214 245519 - 246790 + | maltose/maltodextrin transport system SAV0215 246793 - 248061 + | maltose/maltodextrin transport permease-like protein SAV0216 248063 - 248902 + | maltose/maltodextrin transport permease-like protein SAV0217 248973 - 250052 + | NADH-dependent dehydrogenase SAV0218 250077 - 251117 + | NADH-dependent dehydrogenase TERM 244 251955 - 251971 + G 73 -9.5 -2.87683 | opp_overlap 251965, overlap 251957 TTCCGTACAGTTGGT TATGGAC ATA GTCCATA TGTATGGGCAGATAT SAV0219 251172 - 252140 + | hypothetical protein TERM 245 252361 - 252320 - T 78 -10.4 -2.86338 | gap 1, opp_overlap 252320, overlap 252319 ATTCACAGTAACAAT CCTCACCATTGAAAAGAGT ATATA AC-CTTTTCGATAGTGAGG TATATGATAATAAAA TERM 246 252320 - 252361 + T 79 -10.4 -2.96216 | gap 1, opp_overlap 252320 252319 ATTCACAGTAACAAT CCTCACCATTGAAAAGAGT ATATA AC-CTTTTCGATAGTGAGG TATATGATAATAAAA SAV0220 252995 - 252501 - | hypothetical protein uhpT 253228 - 253947 + | hexose phosphate transport protein uhpT 253951 - 254607 + | hexose phosphate transport protein TERM 247 254801 - 254848 + T 100 -10.1 -4.49132 | opp_overlap 254800 254803 GTGACTCAATGAATT TACTCCTTACAATAAAGACAT ATAGCG GTGTCAATATTGTAGGGAGTA TTGTTTTATATTTAA TERM 248 254915 - 254876 - T 100 -18.8 -4.60924 | opp_overlap 254876 TAAACTCTCTAAAAA GCGGACTGAAAGAAAAGT GAAA ACTTCTCTATCAGTCCGC TTTTTCATAGAACAA TERM 249 254876 - 254915 + T 100 -16.6 -4.72272 | opp_overlap 254876 TAAACTCTCTAAAAA GCGGACTGAAAGAAAAGT GAAA ACTTCTCTATCAGTCCGC TTTTTCATAGAACAA SAV0223 255724 - 254966 - | two-component response regulator SAV0224 257273 - 255717 - | two-component sensor histidine kinase SAV0225 258238 - 257270 - | periplasmic-iron-binding protein BitC TERM 250 258353 - 258370 + H 72 -2.7 -5.38054 | opp_overlap 258353 258366, overlap 258355 258366 TTAAGACGTTGCAAA TGTTGTG ATAG CACAAAA TTTTTGTTTGTCAAG TERM 251 259573 - 259563 - g 71 -5.4 -4.46212 | CCGTCCAGCAGAAAA CTTC AAA GAAG CAGTTCAATGGTTAT TERM 252 260671 - 260657 - g 80 -6.4 -4.66987 | TATACGGTAAGAAAA CTGGTA ACA CACCAG ACGGACGTAAAGCTG pflB 258826 - 261075 + | formate acetyltransferase TERM 253 261824 - 261847 + G 72 -8.2 -3.36803 | opp_overlap 261830 TACCGTTATGTTAAC TTCAAAGGGA AAAT TCCCGTTGAA TTATAAATACAATTC pflA 261098 - 261853 + | formate acetyltransferase activating enzyme TERM 254 261874 - 261913 + F 100 -9.4 -4.75174 | opp_overlap 261877, overlap 261877 ATTCAGACCGAAAAG AAAGCATATGCAACTTCA AGAG TGAAGGGGCATATGCTTC TTTTTCAATTGAGTA TERM 255 261910 - 261877 - f 100 -11.1 -4.70515 | opp_overlap 261874 261877 CAGACCGAAAAGAAA GCATATGCAACTTCA AGAG TGAAGGGGCATATGC TTCTTTTTCAATTGA TERM 256 261877 - 261910 + F 100 -11.1 -4.47888 | opp_overlap 261877, overlap 261874 CAGACCGAAAAGAAA GCATATGCAACTTCA AGAG TGAAGGGGCATATGC TTCTTTTTCAATTGA TERM 257 263709 - 263724 + G 76 -4 -5.29445 | AAACATCATTAGATT TCTTTG TCAT CGAAGA TTTTTCTTATTCGCC SAV0228 262175 - 263938 + | hypothetical protein TERM 258 263914 - 263924 + T 70 -4 -4.9138 | AACATACTTCGATCG TTCT ATA AGAA TTTTGTTTGAATAAT TERM 259 263949 - 263985 + T 100 -13.9 -4.87626 | opp_overlap 263949 AATAATATAAACAAA GACCTCTAAAGTTATCA AGA TGATACCTTCAGAGGTC TTTTTAATGTTGCCA TERM 260 263985 - 263949 - T 100 -16.1 -4.72277 | opp_overlap 263949 AATAATATAAACAAA GACCTCTAAAGTTATCA AGA TGATACCTTCAGAGGTC TTTTTAATGTTGCCA SAV0229 264446 - 264102 - | hypothetical protein coa 264636 - 266612 + | staphylocoagulase precursor SAV0231 268383 - 267199 - | acetyl-CoA acetyltransferase-like protein SAV0232 270674 - 268413 - | putative 3-hydroxyacyl-CoA dehydrogenase FadB TERM 261 268809 - 268821 + g 73 -7.7 -3.88583 | ATAACCATAACGACG TGCCT CAA AGGCA TTTGTAGAGACTTTC TERM 262 269968 - 269956 - G 81 -9.1 -3.76641 | ACTGCAATATCTAAA CCGAC TAG GTCGG ATAGGGCATATGTAC SAV0233 272071 - 270860 - | putative acyl-CoA dehydrogenase FadD SAV0234 273688 - 272183 - | putative acyl-CoA synthetase FadE SAV0235 275276 - 273714 - | putative acetyl-CoA/acetoacetyl-CoA transferase TERM 263 274604 - 274631 + g 79 -8.6 -3.80893 | TAACAACTTCATTCG GTTTTAGTTGAT AGTC GTCAACTAAAGC TTTAACTTGTACAAT SAV0236 275732 - 276874 + | hypothetical protein TERM 264 277103 - 277137 + T 85 -7.1 -4.98255 | opp_overlap 277103 TATAAGCAAATTAAA CCACGCCATAATCAT ATTGG ATGACTTCGGCGTGG TTTTTATAGTTGAAG TERM 265 277137 - 277103 - T 100 -11.5 -4.16205 | opp_overlap 277103 TATAAGCAAATTAAA CCACGCCATAATCAT ATTGG ATGACTTCGGCGTGG TTTTTATAGTTGAAG SAV0237 278663 - 277188 - | nickel ABC transporter nickel-binding protein TERM 266 277401 - 277442 + g 74 -2.3 -5.42131 | overlap 277404 ATTAATTAAATCATC GACGTTGCTATTATTGTAG TCTC CTTTATTAATAGCACCATC TTTTTTATATGCTTG TERM 267 278878 - 278893 + r 72 -7.6 -3.59031 | opp_overlap 278876 278877 AAGTATTGAGCAACT GCTGTA GTAC TACAGC TTGGTTATGTTTAGT SAV0238 279217 - 278861 - | hypothetical protein TERM 268 279332 - 279359 + r 71 -5.6 -4.36262 | opp_overlap 279332 CTCCCAATTAAAAAA CAGCCATGAC AAAGTAAA GTCATAGCTG TTTTGGTATAGATGT TERM 269 279359 - 279332 - R 90 -7.8 -5.26875 | opp_overlap 279332 CTCCCAATTAAAAAA CAGCCATGAC AAAGTAAA GTCATAGCTG TTTTGGTATAGATGT SAV0239 279547 - 279374 - | hypothetical protein SAV0240 280718 - 279573 - | putative flavohemoprotein TERM 270 281080 - 281065 - H 71 -3.3 -5.24291 | opp_overlap 281065, overlap 281060 AAAATTAAAATAAAA TGTGA AATAAA TCACA ATTTAATATTGACCC TERM 271 281941 - 281922 - g 75 -8 -3.71917 | AGGGCAAAGCGCAAA TTGAACAA ATTT TTGTTCAA ACACGTGATGCAGCA lctE 281291 - 282244 + | L-lactate dehydrogenase TERM 272 282304 - 282343 + T 91 -8.7 -4.82667 | opp_overlap 282306, overlap 282306 CCAAAAAATTGTATA AAGGGCTATTTGATACA ACTATA TGTGTCGAGTAGCCCTA TTTTTAATGTAGTGA TERM 273 282306 - 282341 + T 100 -11.3 -4.02905 | opp_overlap 282306, overlap 282304 AAAAAATTGTATAAA GGGCTATTTGATACA ACTATA TGTGTCGAGTAGCCC TATTTTTAATGTAGT TERM 274 282534 - 282500 - T 79 -5.2 -5.32396 | gap 1 ACATTAAAAATAAAA GCAACGATGTCAC TTCTTACTTC GT-ACATCGTTGC CATTAGTTCTGTTGA SAV0242 284093 - 282564 - | PTS enzyme TERM 275 283465 - 283453 - G 77 -5.5 -5.01553 | opp_overlap 283453 AAGCCATAAACAAAA GTACC GAT GGCAC CTGTTTTCGTTACAA TERM 276 283610 - 283622 + g 78 -7.7 -4.12941 | opp_overlap 283609 283619, overlap 283617 AGAAACCTAAATACG GTGGT AAT ACCAC TTTGTGATATTTGTT SAV0243 284455 - 285390 + | inosine-uridine preferring nucleoside hydrolase TERM 277 285450 - 285419 - f 93 -11.7 -3.18913 | gap 1, opp_overlap 285419 AATAGATACAGTTAA CCCTAAGG-CGCCT GATAT AAGCGTCCTTAGGG TTTTTATAGTGGATT TERM 278 285419 - 285450 + F 100 -10.2 -4.92783 | gap 1, opp_overlap 285419 AATAGATACAGTTAA CCCTAAGG-CGCCTG ATA TAAGCGTCCTTAGGG TTTTTATAGTGGATT TERM 279 285633 - 285621 - f 70 -6.3 -4.10453 | overlap 285604 GAAATGTTGTTAAAA CATCA CAA TGATG TACATGCTCATTTTG TERM 280 286776 - 286764 - g 74 -6.3 -4.34737 | opp_overlap 286763, overlap 286760 TGATGAATTAATAAA TCCTT TAC AAGGA AATTATCAATCCTTA SAV0244 285727 - 287823 + | BglG family transcription antiterminator SAV0245 287808 - 288275 + | hypothetical protein SAV0246 288298 - 288576 + | PTS system, galactitol-specific enzyme II B component TERM 281 288632 - 288614 - f 84 -9 -4.28067 | overlap 288606 TCAATAACATATAAA TATATGCA AAT TGCATATA AATGACTATCACGAC gatC 288803 - 290062 + | PTS galactitol-specific enzyme IIC component SAV0248 290080 - 291135 + | sorbitol dehydrogenase SAV0249 291137 - 291283 + | hypothetical protein SAV0250 291307 - 292350 + | sorbitol dehydrogenase-like protein TERM 282 292767 - 292748 - f 81 -5.8 -5.252 | opp_overlap 292748 CATTTTTATAAAAAA TTATCACA CTAT TGTGACAA CTATCTTTGGATTAA ispD 292878 - 293594 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SAV0252 293587 - 294612 + | xylitol dehydrogenase TERM 283 294784 - 294770 - g 72 -2.8 -5.33026 | TAACCGAAACAAAAA CATTAG AAG CAAATG AAATGAAAATAGACG TERM 284 295710 - 295698 - g 83 -6.3 -4.86822 | AATTAGAGAAGAAAA TGTTG TAC CAACA GGTGTACCACGTACT SAV0253 294634 - 296328 + | teichoic acid biosynthesis protein B TERM 285 296538 - 296589 + F 85 -4.9 -5.64304 | opp_overlap 296530 296526 296557 296567 296571, overlap 296530 296584 AAATAATCGATCCAA TCGTTATCTAATTCATAA-ATGTGT AAAC ACATACGTTATGAAT-GGATAACGA TTTTTTGTTATGTTA TERM 286 296758 - 296739 - f 79 -5.7 -5.02439 | ATATAATTACAAAAA CACGTCG GAGGTA CGACATG ATTAAAAATACAATT SAV0254 296756 - 297925 + | trancated TagF ispD 298201 - 298917 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SAV0256 298910 - 299935 + | xylitol dehydrogenase TERM 287 300696 - 300682 - g 75 -5 -5.01546 | opp_overlap 300682 AAATTTAGATAAAAA GTATGA TAT TCACAC TGTTTTTAAAGCGAA TERM 288 301027 - 301015 - g 85 -6.3 -5.22289 | TATTAAAGAGAAAAA TGTAG TGC CTACA GGTGTTCCACGTACT TERM 289 301449 - 301461 + G 73 -4.1 -4.83615 | overlap 301459 ATTTAGAAGATTATA TTACG ACG CGTGA TTTTTATGAACCATA SAV0257 299957 - 301645 + | teichoic acid biosynthesis protein B SAV0258 301678 - 303399 + | hypothetical protein TERM 290 303444 - 303410 - f 76 -9.6 -2.61866 | gap 1, opp_overlap 303410, overlap 303409 303408 303404 AATAAATAATAAATG CCCTCAAATCTATGT GAACTA ACATA-ATTTGAGGG TTTTATTTTGCTATT TERM 291 303410 - 303444 + F 100 -9.6 -5.17488 | gap 1, opp_overlap 303409 303408 303404 303410 AATAAATAATAAATG CCCTCAAATCTATGT GAACTA ACATA-ATTTGAGGG TTTTATTTTGCTATT scdA 303543 - 304217 + | cell wall biosynthesis protein ScdA TERM 292 304234 - 304257 + F 72 -5.3 -4.72333 | TAACGCGATTAGAAA CTGTTGGCA AAGTAA TGTCAGCAG TTTTTCGCTATACTT lytS 304462 - 306216 + | two-component sensor histidine kinase lytR 306219 - 306959 + | two-component response regulator TERM 293 306948 - 306968 + F 100 -8.4 -5.97575 | opp_overlap 306951 TTTAAAGCGTCGATA GGATTACT TTAAC AGTAATCC TTTTTTTTATGCATT lrgA 307078 - 307515 + | murein hydrolase regulator LrgA lrgB 307508 - 308209 + | antiholin-like protein LrgB TERM 294 308268 - 308302 + T 100 -15.2 -5.1634 | opp_overlap 308268 ATTATCGTAAAAAAA CGTCTATACTCCAGTT TAT AACTGGGATATAGACG TTTTTATGTATTTAT TERM 295 308302 - 308268 - T 100 -15.2 -5.44721 | opp_overlap 308268 ATTATCGTAAAAAAA CGTCTATACTCCAGTT TAT AACTGGGATATAGACG TTTTTATGTATTTAT SAV0264 309021 - 308317 - | hypothetical protein TERM 296 308744 - 308730 - G 80 -7.2 -4.57569 | opp_overlap 308730 CCATCTCCTTAAAAA CAAGTA CCT TACTTG TCATTCGATGTTCAC SAV0265 309170 - 309961 + | hypothetical protein bglA 309977 - 311413 + | 6-phospho-beta-glucosidase TERM 297 311524 - 311506 - T 70 -6.1 -4.1891 | GGCCCCCAACACAAA GAATTTC GAAAA GAAATTC TACAGGTAATGCAAG SAV0267 312661 - 311900 - | hypothetical protein rbsK 313826 - 312912 - | ribokinase rbsD 314258 - 313854 - | D-ribose pyranase SAV0270 315154 - 314273 - | ribose transporter TERM 298 315349 - 315323 - R 100 -10.2 -4.7871 | AATTATGATTAAAAA CCCTCAGCATTA AAG CAACGCTAAGGG CCTAACAATGATGAG SAV0271 316384 - 315386 - | sugar-binding transcriptional regulator LacI SAV0272 316523 - 316723 + | NADH dehydrogenase subunit SAV0273 316761 - 317153 + | hypothetical protein TERM 299 317176 - 317209 + T 100 -9.8 -5.16151 | opp_overlap 317179 TGAATATAATTAGAG TAAGCGAAGAAC AGAGAAAAAC GTTCTTCGCTTA TTTTTCTTGAATTTC SAV0274 318657 - 317281 - | transmembrane efflux pump protein TERM 300 318633 - 318613 - G 73 -9.1 -2.87443 | overlap 318612 TGCAGACAACATAAT CGCAATAAT AAT ATTACTGCG TGGTGAAGATTGTGT SAV0275 318891 - 319883 + | penicillin amidase V lytM 320209 - 321159 + | peptidoglycan hydrolase TERM 301 321169 - 321200 + T 81 -4.5 -5.48054 | opp_overlap 321169 AGATAATACAGTAAA TCCCAAGTTAC AATATCATAC GCAACTTGGGA TTTTTTCGTTTTAAT TERM 302 321200 - 321169 - T 79 -8.2 -3.96051 | gap 1, opp_overlap 321169 AGATAATACAGTAAA TCCCAAGTTACAATA TCA TAC-GCAACTTGGGA TTTTTTCGTTTTAAT SAV0277 321870 - 321211 - | ABC transporter ATP-binding protein SAV0278 322804 - 321884 - | hypothetical protein SAV0279 323967 - 322801 - | hypothetical protein TERM 303 323276 - 323264 - G 72 -4.9 -4.82901 | CGCTCTTTAGAAAAA TGAAA CAT TTTCA ATCGCGCTTTCAATA TERM 304 324020 - 323987 - R 100 -13.5 -2.71364 | gap 1, opp_overlap 323987, overlap 323990 CCACTCCTCCAATGA TAAGATTGAAAGG-CA AGA TGACCTTTCAATCTTA TTTTTATATTTTAGT TERM 305 323987 - 324020 + r 100 -13.5 -5.30339 | gap 1, opp_overlap 323987 323990 CCACTCCTCCAATGA TAAGATTGAAAGG-CA AGA TGACCTTTCAATCTTA TTTTTATATTTTAGT TERM 306 324017 - 323990 - R 87 -10.8 -3.50853 | gap 1, opp_overlap 323987, overlap 323987 CTCCTCCAATGATAA GATTGAAAGG-CA AGA TGACCTTTCAATC TTATTTTTATATTTT SAV0280 325558 - 324035 - | hypothetical protein TERM 307 325819 - 325865 + r 100 -9.7 -5.16841 | gap 2, opp_overlap 325819 AACATACAAAATAAA GCGACCAATTTTGCAGTGTTACG AAT TGTAA-ACTGCGAACT-GGTCGC TTTTTATTGATGTCA TERM 308 325865 - 325819 - R 93 -9 -4.87008 | gap 2, opp_overlap 325819 AACATACAAAATAAA GCGACCAATTTTGCAGTGTTAC GAATT GTAA-ACTGCGAA-CTGGTCGC TTTTTATTGATGTCA SAV0281 326782 - 325889 - | hypothetical protein SAV0282 327030 - 327323 + | hypothetical protein TERM 309 327332 - 327373 + F 72 -4.5 -5.00616 | opp_overlap 327335 327343, overlap 327338 327343 GCAATAAGCATTCTG AAATTGGCAAAGTCACATT TTCT AATGTGGCTTTGCTTATCA TTTTTTAAGAAAACA TERM 310 327338 - 327367 + F 100 -14.5 -3.81575 | opp_overlap 327335 327343, overlap 327332 327343 AGCATTCTGAAATTG GCAAAGTCACATT TTCT AATGTGGCTTTGC TTATCATTTTTTAAG TERM 311 327343 - 327362 + F 75 -7.2 -4.06805 | opp_overlap 327343 327335, overlap 327338 327332 TCTGAAATTGGCAAA GTCACATT TTCT AATGTGGC TTTGCTTATCATTTT SAV0283 327406 - 330435 + | hypothetical protein TERM 312 330681 - 330656 - gf 100 -16.3 -4.10657 | opp_overlap 330660 TGATATGTTTCAAAA TCAAGCGAGTC ACTC GACTCGCTTGA ATGAAACTAAAAAAG TERM 313 330660 - 330677 + GF 91 -11.3 -3.06183 | opp_overlap 330656 ATGTTTCAAAATCAA GCGAGTC ACTC GACTCGC TTGAATGAAACTAAA SAV0284 330435 - 330893 + | hypothetical protein SAV0285 330865 - 331107 + | hypothetical protein SAV0286 331120 - 332454 + | hypothetical protein TERM 314 336458 - 336439 - g 77 -5 -5.02715 | overlap 336441 ATATTAAATGAAAAA TATGCGAT TTGT ATCGCAGA CTCAAGTGGAGAGTT TERM 315 336456 - 336441 - g 78 -7.6 -4.12375 | overlap 336439 ATTAAATGAAAAATA TGCGAT TTGT ATCGCA GACTCAAGTGGAGAG TERM 316 336582 - 336572 - g 71 -5.4 -4.54608 | opp_overlap 336572 TAAAACAAAGAGAAA TGGA CGG TCCA TTTGAAAAAGATTCA SAV0287 332476 - 336915 + | DNA segregation ATPase and related proteins SAV0289 336945 - 337337 + | hypothetical protein SAV0290 337353 - 337667 + | hypothetical protein SAV0291 337664 - 338341 + | hypothetical protein SAV0292 338341 - 338658 + | hypothetical protein SAV0293 338668 - 340512 + | hypothetical protein SAV0294 340523 - 341014 + | hypothetical protein TERM 317 341030 - 341056 + F 93 -8.2 -5.055 | ACAATCTTAATGTGA GACTAAACAA TAAAGCT TTGTTTAGTC TTTTTTGGCGGTTAA SAV0295 341217 - 341900 + | hypothetical protein SAV0296 342046 - 342657 + | hypothetical protein TERM 318 342948 - 342970 + G 88 -7.8 -5.14698 | opp_overlap 342939 342947 342946, overlap 342939 AAGTTATTGCAAATT GCAATTATCG TAA CAATAATTGC TTTTGTTTTAAATTT SAV0297 342792 - 343010 + | hypothetical protein TERM 319 343030 - 343061 + F 100 -9.6 -5.27335 | opp_overlap 343030 AACGAATTTGAAGAA GCATTAAGCGACAT TTGG GTGTTGTTTAATGC TTTTTATTTAACGGA SAV0298 343142 - 343642 + | hypothetical protein SAV0299 343653 - 344153 + | hypothetical protein SAV0300 344164 - 344625 + | hypothetical protein SAV0301 344674 - 345174 + | hypothetical protein SAV0302 345185 - 345670 + | hypothetical protein SAV0303 346295 - 346669 + | hypothetical protein SAV0304 346819 - 347217 + | hypothetical protein TERM 320 347259 - 347317 + T 95 -12.1 -3.48738 | opp_overlap 347263 347264 347308, overlap 347264 TCTTAAGTAATTAAA TAAAGTGCTCTCTTAGAAGTAGATTTT CAGTC AATAACTGCTTTTAAGAGAGCATTTTG TATTTGATAATGCTC TERM 321 347264 - 347312 + T 100 -12 -4.82128 | opp_overlap 347263 347264 347308, overlap 347259 AGTAATTAAATAAAG TGCTCTCTTAGAAGTAGATTTT CAGTC AATAACTGCTTTTAAGAGAGCA TTTTGTATTTGATAA TERM 322 347418 - 347372 - T 86 -3.2 -5.86332 | gap 1, overlap 347374 CGAACTTAAAAAAAA TACGTTAGACAATGCACTT CTAAATATTT AAG-GCATCGACTAACGCA TTGTTCAAATATAGT SAV0305 348257 - 347433 - | formate-nitrite transporter TERM 323 347908 - 347898 - G 72 -2.6 -5.25772 | AAAGCATAATAAAAA TATT TTC AATA CTCTAGTCGGTTTAA TERM 324 348481 - 348450 - R 100 -9.6 -5.37043 | ATTTCATATAAAAAA GCCTAGTAACGA GGGGGCAA TCATTACTAGGC AGTGAGCATTTATTA SAV0306 349801 - 348494 - | branched chain amino acid ABC transporter TERM 325 351244 - 351233 - g 70 -4.4 -4.72386 | TAAATTACGTAAAAA TGCT ATTA AGCA ATTCGATCCTAAAAC SAV0307 350385 - 351275 + | outer membrane protein precursor TERM 326 351289 - 351320 + F 100 -11 -4.7629 | AATATATGAATTGGA CGTCTACATGTACT TAAA GGTATATGTAGGCG TTTTTAAATTGATCC SAV0308 351524 - 352573 + | ABC transporter permease SAV0309 352586 - 353263 + | ABC transporter ATP-binding protein TERM 327 353272 - 353294 + F 82 -6.2 -5.26155 | opp_overlap 353273, overlap 353274 AGAATAGTTTTATTA AGCCGGTACA TCA TGTGCCGGTA TTTTTATGTTTATGT TERM 328 353274 - 353292 + F 100 -11 -4.23487 | opp_overlap 353273, overlap 353272 AATAGTTTTATTAAG CCGGTACA TCA TGTGCCGG TATTTTTATGTTTAT SAV0310 353471 - 354502 + | regulatory protein PfoR TERM 329 355164 - 355176 + GF 83 -4.8 -5.39721 | ACTTAGGTAGGCTTG GCGA AACGG TCGC TTTTTTATCTGCTAG SAV0311 354845 - 355963 + | carbohydrate kinase-like protein SAV0312 355938 - 356861 + | hypothetical protein SAV0313 356872 - 358092 + | pyrimidine nucleoside transporter TERM 330 358181 - 358134 - T 74 -7.9 -3.85165 | gap 2, opp_overlap 358134 358135, overlap 358135 CATGGCAAAGCTAAA CCCCATCACCAAG-T-TGGCGCA ACAG CGCATCATAACTTGGTGATGGGA TTTTATCATAACAAT TERM 331 358135 - 358180 + T 72 -8.5 -3.27406 | gap 2, opp_overlap 358134 358135, overlap 358134 ATGGCAAAGCTAAAC CCCATCACCAAG-T-TGGCGC AACAGC GCATCATAACTTGGTGATGGG ATTTTATCATAACAA TERM 332 358180 - 358135 - T 75 -9.2 -2.90617 | gap 2, opp_overlap 358135 358134, overlap 358134 ATGGCAAAGCTAAAC CCCATCACCAAG-T-TGGCGCA ACAG CGCATCATAACTTGGTGATGGG ATTTTATCATAACAA SAV0314 359729 - 358197 - | putative sodium/glucose cotransporter nanA 360650 - 359769 - | N-acetylneuraminate lyase SAV0316 360808 - 361668 + | hypothetical protein TERM 333 361926 - 361874 - T 82 -5.3 -5.38497 | gap 4, opp_overlap 361874 361877, overlap 361875 ATTGAAATTAAAAAA GCACCTAGCAACTCGTTAGGACAATCA CGA TGATTGTC-TA-C-AGTTGC-AGGTGG ATTTGAATATACTAC TERM 334 361925 - 361875 - T 80 -8.8 -3.81472 | gap 4, opp_overlap 361874 361877, overlap 361874 TTGAAATTAAAAAAG CACCTAGCAACTCGTTAGGACAATCA CGA TGATTGTC-TA-C-AGTTGC-AGGTG GATTTGAATATACTA SAV0317 362745 - 361945 - | hypothetical protein SAV0318 362885 - 363553 + | N-acetylmannosamine-6-phosphate 2-epimerase SAV0319 364997 - 363684 - | hypothetical protein TERM 335 366243 - 366231 - g 72 -9.1 -2.74696 | overlap 366230 366228 CAACTAATCAAAGAT GCGCT TCA AGCGC CTAAAACACGTTCGA geh 365415 - 367490 + | glycerol ester hydrolase TERM 336 367597 - 367636 + T 78 -9.3 -3.34646 | opp_overlap 367598 367599, overlap 367595 367594 367599 AGTAAAGTGAAATAA AGCGCCTGTCTCATTAG CGAAAA CTAAAGGGACAGGCGTA TCTGTTTATGAGCTT TERM 337 367635 - 367598 - T 100 -9.1 -4.53439 | opp_overlap 367597 367595 367594 367599, overlap 367599 GTAAAGTGAAATAAA GCGCCTGTCTCATTAGC GAAA ACTAAAGGGACAGGCGT ATCTGTTTATGAGCT TERM 338 367634 - 367599 - T 100 -12.6 -3.30979 | opp_overlap 367597 367595 367594 367599, overlap 367598 TAAAGTGAAATAAAG CGCCTGTCTCATTAGC GAAA ACTAAAGGGACAGGCG TATCTGTTTATGAGC TERM 339 367599 - 367634 + T 100 -14.1 -3.23335 | opp_overlap 367599 367598, overlap 367597 367595 367594 TAAAGTGAAATAAAG CGCCTGTCTCATTAG CGAAAA CTAAAGGGACAGGCG TATCTGTTTATGAGC SAV0321 368559 - 367732 - | hypothetical protein SAV0322 369831 - 368632 - | trimethylamine dehydrogenase SAV0323 370133 - 371134 + | luciferase family protein SAV0324 371168 - 371500 + | putative glycine cleavage system H protein SAV0325 371501 - 372301 + | hypothetical protein SAV0326 372288 - 373235 + | hypothetical protein SAV0327 373213 - 374235 + | putative lipoate-protein ligase SAV0328 374551 - 375576 + | putative oxidoreductase ulaA 377016 - 375670 - | ascorbate-specific PTS system enzyme IIC SAV0330 377315 - 377031 - | putative sugar-specific PTS component EIIB SAV0331 377760 - 377317 - | hypothetical protein SAV0332 379720 - 377765 - | hypothetical protein SAV0333 379932 - 380351 + | hypothetical protein TERM 340 380361 - 380382 + F 100 -9.5 -4.39414 | CAATAAATGGTAAGT GTGACTGGT AGAA ATCAGTCAC TTTATCTTTAATATT SAV0334 380458 - 381813 + | hypothetical protein TERM 341 381822 - 381858 + F 78 -6.6 -4.56775 | AGGTTAAATATTTCG TACACTTCTGGCTGAG TATAT TTCGGTCGGAAGGGTA TTTTTCGAAAAAAAT SAV0335 381917 - 382375 + | hypothetical protein glpT 382714 - 382439 - | glycerol-3-phosphate transporter TERM 342 382623 - 382639 + g 88 -7.9 -5.09895 | opp_overlap 382623, overlap 382621 AATCCTGTTAATCCA GCTGCTG TGC CAGCTGC TTTTTTAGGTACATA glpT 383797 - 382733 - | glycerol-3-phosphate transporter SAV0338 384109 - 385035 + | glyoxalase family protein SAV0339 385049 - 386110 + | luciferase family protein SAV0340 386124 - 386690 + | NADH-dependent FMN reductase SAV0341 387744 - 386749 - | hypothetical protein TERM 343 387930 - 387914 - H 79 -8 -4.20367 | overlap 387887 GGCCCCAACAAAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA SAV0342 388109 - 388654 + | ribosomal-protein-serine N-acetyltransferase TERM 344 388668 - 388706 + F 100 -11.2 -4.32046 | opp_overlap 388673, overlap 388673 388701 GACAAATTAGACTTA CAAAAGAGTGATGACATT TAA AATGGCATCGCTCTTTTA TTTAATTTTTGAAAA TERM 345 388701 - 388673 - f 88 -8.9 -4.45485 | opp_overlap 388668 388673 ATTAGACTTACAAAA GAGTGATGACATT TAA AATGGCATCGCTC TTTTATTTAATTTTT TERM 346 388673 - 388701 + F 100 -11.1 -5.10516 | opp_overlap 388673, overlap 388668 ATTAGACTTACAAAA GAGTGATGACATT TAA AATGGCATCGCTC TTTTATTTAATTTTT SAV0343 388921 - 389775 + | hypothetical protein SAV0344 389886 - 391001 + | hypothetical protein SAV0345 390979 - 392694 + | hypothetical protein TERM 347 392720 - 392692 - T 100 -9 -5.22039 | opp_overlap 392699, overlap 392699 TTTAAATTTAAAAAA TAAAAAACAGGC CGAGT GCCTGTTTTTTT GTTGCTGTATTGCGG TERM 348 392713 - 392699 - T 95 -7.1 -6.04324 | opp_overlap 392699, overlap 392692 TTAAAAAATAAAAAA CAGGC CGAGT GCCTG TTTTTTTGTTGCTGT TERM 349 392699 - 392713 + T 95 -7.1 -5.85737 | opp_overlap 392699 392692 TTAAAAAATAAAAAA CAGGC CGAGT GCCTG TTTTTTTGTTGCTGT SAV0346 393597 - 392935 - | hypothetical protein TERM 350 393460 - 393436 - G 73 -3.6 -5.04868 | TGAAATGAAACAAAA CGCGATGA AAAATATAA TCATCACG TATATTTGGATCATT SAV0347 393868 - 393653 - | hypothetical protein SAV0348 394365 - 393976 - | hypothetical protein SAV0349 394605 - 394808 + | transcription regulator SAV0350 394805 - 395518 + | hypothetical protein SAV0351 395543 - 396385 + | ABC transporter ATP-binding protein SAV0352 396385 - 397014 + | hypothetical protein TERM 351 397057 - 397092 + T 100 -10.7 -4.90906 | gap 1, opp_overlap 397054 TTGAAATAATATTTA GAGCAGGTGATAAATC AATAC GATT-ATCATCTGCTC TTTTTGGTGTTGTGG TERM 352 397370 - 397326 - T 73 -8.2 -3.42996 | opp_overlap 397360 GATCATGTAGCATAA CTGAATCCAAAAGTAT AATGTGAAGTTCG ACACTTTTGGATTCAG TTCAAATACTTTGAC SAV0353 398534 - 397401 - | hypothetical protein TERM 353 397456 - 397442 - G 70 -4.2 -4.65933 | GATTTTTAAAATAAA TCAGCA TGA TGCAGA AAGTCGCAACGGATA SAV0354 399073 - 400254 + | acetyl-CoA acetyltransferase TERM 354 400309 - 400258 - T 72 -6.9 -4.18213 | gap 1, opp_overlap 400263, overlap 400263 AAGTATAAATAATAA GAAAACAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTGTTTTT ATTTGTTTATGGATT TERM 355 400304 - 400263 - T 83 -6.8 -5.04082 | gap 1, opp_overlap 400263, overlap 400258 TAAATAATAAGAAAA CAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTG TTTTTATTTGTTTAT TERM 356 400263 - 400304 + T 90 -6.8 -5.56573 | gap 1, opp_overlap 400263 400258 TAAATAATAAGAAAA CAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTG TTTTTATTTGTTTAT SAV0355 401089 - 400337 - | hypothetical protein metE 403360 - 401132 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 357 401733 - 401755 + g 71 -6.4 -4.21142 | AGAATTGTTACAGGT CCAGTTAA CATACCT TTAACTGG TTTATCTGTTAAGCT TERM 358 403323 - 403337 + g 71 -6.4 -4.10188 | CTTTTTCTACCTAAT CTTGGG AAT CCTAAG TTTGATGTTTTAATT SAV0357 405198 - 403357 - | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein TERM 359 404298 - 404322 + gr 76 -3.5 -5.37345 | GAGATGGATTGAAAA GTGCTTTCGTT GGT ATCGGAATCAC TTTTTTGTCATTAAC SAV0358 406327 - 405167 - | putative cystathionine beta-lyase TERM 360 405472 - 405446 - GR 81 -8 -4.08887 | opp_overlap 405446 405454 ATCAGCTAAACGAAA GCCAATAACGGC ACC GCCATTTTTAGC TTGTTCTAAATGAGC TERM 361 406104 - 406081 - GR 81 -7.5 -4.35926 | overlap 406095 ATTTGAAAGTCAAAA GTACTGCTG AAATAG CAGCAATAC CTGATGCAAAAGCAA SAV0359 407427 - 406324 - | cystathionine gamma-synthase TERM 362 407505 - 407459 - H 100 -17.5 -5.84011 | opp_overlap 407459, overlap 407499 AAGAAAAAATAAAAA GCTTCCGTCCTTCGTACCCGA ATGAA TCGGATAAAAAGGACGAAAGC TTATGTTTCGCGGTA TERM 363 407459 - 407505 + H 91 -10.9 -3.82202 | opp_overlap 407459 407499 AAGAAAAAATAAAAA GCTTCCGTCCTTCGTACCCGA ATGAA TCGGATAAAAAGGACGAAAGC TTATGTTTCGCGGTA TERM 364 408751 - 408730 - g 70 -2.3 -5.32565 | gap 1, overlap 408742 TAATGAATTAAAAAA TGTTT-CGTC AAA GTCGGAAACA GACAAAGTAGATATA SAV0360 408098 - 408934 + | transcription terminator SAV0361 409088 - 409969 + | hypothetical protein TERM 365 410189 - 410171 - g 87 -2.4 -6.11019 | overlap 410174 AAAAACTAAAAAAAA TCATCGTA TCT CAGGATGA TACACAAAGATAGGA SAV0362 409999 - 410202 + | hypothetical protein TERM 366 410235 - 410263 + G 77 -9.7 -2.99972 | opp_overlap 410250, overlap 410234 TTAACAGCAGGTATC GTTGGCTTACCAA ACG TTGGTAAATCAAC ATTATTTAATGCAAT SAV0363 410214 - 411311 + | translation-associated GTPase TERM 367 411351 - 411374 + T 71 -6 -4.50058 | opp_overlap 411351, overlap 411346 AGTATATATGTAGAA GAGGCGGA ATCAATTG TTCGCCTC TTTTAATTATGCGTA SAV0364 411588 - 411397 - | hypothetical protein TERM 368 411528 - 411510 - G 72 -6 -4.30719 | overlap 411512 CCTTTGCACAATAAA GCCATTCA GGA TGAATGCC ACTATTAAGTATCTC rpsF 411832 - 412128 + | 30S ribosomal protein S6 TERM 369 412616 - 412595 - g 79 -9.5 -3.4082 | GAAACAATCTGATAA TCCATTTGC AAAT GCAAACGGA CCGATTGATATAAGT ssb 412149 - 412652 + | single-strand DNA-binding protein of phage phi PVL TERM 370 412843 - 412824 - g 73 -8.6 -3.32844 | opp_overlap 412824 CGTTTTATCTCAGAA CGCGGTAA AATT TTACCACG TCGTGTAACTGGTAC rpsR 412704 - 412946 + | 30S ribosomal protein S18 TERM 371 412963 - 412990 + T 95 -6.2 -5.88197 | opp_overlap 412964, overlap 412964 ATTTAATATATTATA ACCCTCGTAGGC ATAG GCTTATGGGGGA TTTTTTTATGTTTGG TERM 372 412964 - 412989 + T 91 -9.7 -4.10478 | opp_overlap 412964, overlap 412963 TTTAATATATTATAA CCCTCGTAGGC ATAG GCTTATGGGGG ATTTTTTTATGTTTG TERM 373 413121 - 413158 + T 79 -5.7 -5.10461 | opp_overlap 413124, overlap 413124 413127 TTTAGATGCATAAAA AAAGAACTACGCATTTT AAAT AAAATGCATAGCTCTTC TTTTTCTTGCATACG TERM 374 413124 - 413155 + T 81 -7.4 -4.64495 | opp_overlap 413124, overlap 413121 413127 AGATGCATAAAAAAA GAACTACGCATTTT AAAT AAAATGCATAGCTC TTCTTTTTCTTGCAT TERM 375 413155 - 413124 - T 100 -11.8 -5.65177 | opp_overlap 413124 413121 413127 AGATGCATAAAAAAA GAACTACGCATTTT AAAT AAAATGCATAGCTC TTCTTTTTCTTGCAT SAV0368 414197 - 413223 - | hypothetical protein TERM 376 413857 - 413874 + g 70 -4.2 -4.80656 | TCATCTATTATTTTA TAACCA TCTTCT TGGTTA TTTTCTGTTATTAGT SAV0369 414503 - 414249 - | truncated integrase SAV0370 415119 - 415730 + | hypothetical protein TERM 377 415776 - 415807 + F 100 -11 -4.3953 | opp_overlap 415781, overlap 415780 TATTGCTAATACTTT GAAAGTTAGGTATC TAAA GGTGCCTAGCTTTC TTTGTTATGATTAGC TERM 378 415780 - 415803 + F 75 -6 -4.7458 | opp_overlap 415781, overlap 415776 GCTAATACTTTGAAA GTTAGGTATC TAAA GGTGCCTAGC TTTCTTTGTTATGAT SAV0371 416099 - 416467 + | hypothetical protein SAV0372 416648 - 417220 + | hypothetical protein SAV0373 417620 - 417357 - | hypothetical protein SAV0374 417920 - 418171 + | hypothetical protein TERM 379 418196 - 418180 - T 95 -6.7 -6.01369 | TAAATAATAAAAAAA TTCAATT GGA AATTGAA ATAAAGATGGCATTC TERM 380 418202 - 418221 + T 82 -4.3 -5.65927 | opp_overlap 418202 GGAAATTGAAATAAA GATGGCA TTCAGT TGTCATC TTTTTTATTTGCGTG SAV0375 418419 - 418210 - | hypothetical protein TERM 381 418378 - 418355 - G 95 -6 -6.02919 | TGACAAATAAAAAAA GGATGACG TTGGGTTG CGCCATCC AGGAGTATTATGTTC TERM 382 418417 - 418406 - G 70 -4.4 -4.70583 | opp_overlap 418406, overlap 418401 418409 TTCATGAATATAAAA GACT GTGT AGTC ATTTAAGAACTACAC SAV0376 418573 - 419178 + | putative phosphoglycerate mutase Gpm3p SAV0377 419627 - 419244 - | hypothetical protein TERM 383 419774 - 419746 - R 100 -11.1 -5.29385 | AAGGCAATTAAAAAA GCATCAAACAGTA ATA TGCTGCTTGATGC AAAATGGTAAGGTAT SAV0378 420523 - 419897 - | hypothetical protein SAV0379 420787 - 420596 - | hypothetical protein TERM 384 420949 - 420917 - R 90 -6.5 -5.60993 | GTCGGGATAAAAAAA TAACAGCATCTTA ACAAATG TAAGATACTGTCA GTGAAACTGTGAAAA ahpF 422490 - 420967 - | alkyl hydroperoxide reductase subunit F TERM 385 422165 - 422181 + g 76 -3.7 -5.30616 | overlap 422167 TCTAAGTTTTTAATT TGGTCAA TAA TTGACTG TTTTTCTTTAGGTGC TERM 386 422167 - 422179 + g 74 -6.3 -4.2793 | overlap 422165 TAAGTTTTTAATTTG GTCAA TAA TTGAC TGTTTTTCTTTAGGT ahpC 423075 - 422506 - | alkyl hydroperoxide reductase subunit C SAV0382 423567 - 424322 + | nitro/flavin reductase TERM 387 424387 - 424336 - T 100 -14.8 -4.43815 | opp_overlap 424337 424339, overlap 424339 AGCAAGATACCAAAA TAACCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGGT-A TTTCTTGCAATGAAT TERM 388 424337 - 424387 + T 100 -16.4 -4.18488 | gap 1, opp_overlap 424336 424339, overlap 424339 GCAAGATACCAAAAT AACCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGGTA TTTCTTGCAATGAAT TERM 389 424385 - 424339 - T 100 -19 -4.31813 | gap 1, opp_overlap 424337 424339, overlap 424336 AAGATACCAAAATAA CCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGG TATTTCTTGCAATGA TERM 390 424339 - 424385 + T 100 -19 -3.69068 | gap 1, opp_overlap 424339 424336, overlap 424337 AAGATACCAAAATAA CCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGG TATTTCTTGCAATGA SAV0383 425790 - 424402 - | proton/sodium-glutamate symport protein TERM 391 426536 - 426557 + H 82 -4.4 -5.52384 | overlap 426539 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 392 427953 - 427923 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 426637 - 427956 + | IS1181 transposase SAV0385 429244 - 428288 - | hypothetical protein TERM 393 429002 - 429016 + g 85 -4.3 -5.69262 | opp_overlap 429002 ATCGTTTTTGACAAT GACTT GCAGG AAGTC TTTTTCTTTTTCTAA SAV0386 430024 - 429362 - | hypothetical protein TERM 394 430138 - 430111 - R 100 -9.3 -5.28826 | opp_overlap 430111 AAATGGTATAAAAAA CTGTACTATCT TAAATT AGACAGTACAG TAATCTCATTTTGAA SAV0387 430574 - 430167 - | hypothetical protein xprT 431087 - 431665 + | xanthine phosphoribosyltransferase TERM 395 431803 - 431817 + G 71 -5.7 -4.56775 | GTAGATATATTTATG TGTGG GGTTG CCACA TTTTTACAAGCCAAT pbuX 431665 - 432933 + | xanthine permease guaB 432971 - 434437 + | inositol-monophosphate dehydrogenase TERM 396 435635 - 435651 + G 73 -8.7 -3.22858 | overlap 435635 435633 TGGAGACAACCATTC CCAGGAC CTG GTCTTGG TATTCGTGTACTTGG TERM 397 435783 - 435756 - g 74 -6.4 -4.32857 | opp_overlap 435774 GTCTTGAAAGAGAAA TTTGGCAATACT TCAC AGTGTTACCAAA CATTCAATCAGTAGG guaA 434462 - 436003 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 398 436003 - 436056 + T 71 -4.8 -4.75404 | gap 1, opp_overlap 436014, overlap 436009 436012 AATTGAGTGGGAATA GTTGTAGGAGAGCTAGAAATCCT CTTATACCA AGGGTTTCTGGCTCTTCT-TATC TTTTTACTGCACTTT TERM 399 436009 - 436051 + T 100 -11.5 -4.11027 | opp_overlap 436014, overlap 436003 436012 GTGGGAATAGTTGTA GGAGAGCTAGAAATCCT CTTATACCA AGGGTTTCTGGCTCTTC TTATCTTTTTACTGC TERM 400 436012 - 436048 + T 91 -9.6 -4.14576 | opp_overlap 436014, overlap 436009 436003 GGAATAGTTGTAGGA GAGCTAGAAATCCT CTTATACCA AGGGTTTCTGGCTC TTCTTATCTTTTTAC int 437264 - 436071 - | integrase-like protein TERM 401 436750 - 436770 + g 74 -5.5 -4.77757 | overlap 436753 TCAAATTCTTCTTTT GTCCAAAAT TCA ATTTTAGAC TTTTGCTTTTTCACA SAV0393 437491 - 437291 - | hypothetical protein TERM 402 437949 - 437933 - R 74 -6.5 -4.46854 | overlap 437942 TGATGGAATAACAAA CCTCCCA AAT CGGGAAG CGTGGATACGATTCG SAV0394 438219 - 437989 - | hypothetical protein SAV0395 438698 - 438216 - | hypothetical protein TERM 403 438812 - 438779 - R 84 -6.9 -5.18357 | opp_overlap 438779 TAAGTGACCAAAAAA GCACATAAACAGA TTGTTTTC TCTGTTCATATGC TTTGATTTTTCTATC SAV0396 438937 - 438827 - | hypothetical protein SAV0397 439169 - 439522 + | putative transcriptional regulator TERM 404 439589 - 439548 - T 100 -10.3 -5.42975 | TCAGATAAACAAAAA GAGCCGATAAGATGAGA GTTTCATT TCTCAAATTATCGGCTC TGCGTCTTGGCGTCT tetM 441784 - 439865 - | tetracycline resistance protein TERM 405 440761 - 440771 + g 79 -4 -5.4251 | GTAGTAGAGGGTGCG GATT TTC AATC TTTTTTCTCTGTGGC TERM 406 441418 - 441429 + g 72 -5.8 -4.28548 | opp_overlap 441416 TGATAAAAAAGATTG TGGG AATC CCCA TTTTCCTAAGTGCAT TERM 407 441854 - 441825 - R 100 -16.7 -4.90296 | opp_overlap 441825 AAAAGGGCATAAAAA TCCCAGTGATAAA TACT TTTATCACTGGGA TTTTTATGCATAACC TERM 408 441825 - 441854 + r 100 -16.7 -4.87665 | opp_overlap 441825 AAAAGGGCATAAAAA TCCCAGTGATAAA TACT TTTATCACTGGGA TTTTTATGCATAACC TERM 409 442152 - 442117 - R 100 -12.2 -4.7254 | gap 1, opp_overlap 442116 442111 442117, overlap 442119 ATTTTTTATCAAAAA GAGTACATGATTACAAA GTA TCTGTAATCATGTAC-C AATATTTGTTATTTT TERM 410 442151 - 442119 - R 100 -15.9 -3.98256 | opp_overlap 442117 442116 442111, overlap 442117 TTTTTATCAAAAAGA GTACATGATTACAAA GTA TCTGTAATCATGTAC CAATATTTGTTATTT SAV0399 443123 - 442161 - | hypothetical protein SAV0400 444129 - 443107 - | NLP/P60 family lipoprotein SAV0401 446153 - 444126 - | hypothetical protein TERM 411 446113 - 446090 - G 70 -4.6 -4.78029 | CTAATAAAAGTAAAA TAACGCCC ACACAAAG GAGCGTTA TCCAACTATAGTGAA SAV0402 448603 - 446150 - | putative ATP/GTP-binding protein TERM 412 447806 - 447790 - G 79 -3.7 -5.4505 | GCTGGTAATAAAAAA TTTCACT ATT AGGGAAA TCCAATTCACCAACA TERM 413 448551 - 448539 - G 73 -7.7 -3.85209 | ATTAATTCATAATAA GCGAA TAC TTCGC CATCATGATTAAATA SAV0403 449024 - 448587 - | hypothetical protein TERM 414 449039 - 449015 - G 80 -5.1 -5.36364 | opp_overlap 449015 449018 GTAAAAATAGAAAAA GAACAATCA AAATAGG TGATTGCTC TTTCAATGCTTTAAC SAV0404 449692 - 449054 - | hypothetical protein SAV0405 450248 - 449748 - | hypothetical protein TERM 415 450312 - 450289 - R 76 -2.5 -5.65177 | gap 1 ATAGTCATAAAAAAA GTAGCAATCA GTTAA TGAC-GCTAC TTATCAAGGTATCCG SAV0406 451088 - 450309 - | hypothetical protein SAV0407 451351 - 451130 - | hypothetical protein SAV0408 452818 - 451634 - | putative transcriptional regulator TERM 416 452871 - 452842 - R 70 -3.7 -5.15969 | gap 1 CTCCAATCTAAAAAA GATGTAAACT-ATG ACC CTTGAGTTTACACC TTTCATATTTTCCGC TERM 417 453002 - 452973 - R 100 -12.9 -3.5525 | overlap 452974 452976 ATAGAGGGGGCTAAA GGATTGGCGTGGC TAAC GCCACACCAATCA AAGCAAGTCTGAACC TERM 418 453001 - 452974 - R 100 -16.4 -2.72829 | overlap 452973 452976 TAGAGGGGGCTAAAG GATTGGCGTGGC TAAC GCCACACCAATC AAAGCAAGTCTGAAC TERM 419 452999 - 452976 - R 100 -13.2 -2.90813 | overlap 452974 452973 GAGGGGGCTAAAGGA TTGGCGTGGC TAAC GCCACACCAA TCAAAGCAAGTCTGA TERM 420 453005 - 453054 + r 100 -9.4 -5.47821 | gap 1, opp_overlap 453005 GCCACACCAATCAAA GCAAGTCTGAACCTGTACCTTTC ACTTC GTGCGGTACAGGCTCAGA-TTGC TTTTTTTGAATGACT TERM 421 453054 - 453005 - R 90 -10.1 -3.98282 | gap 1, opp_overlap 453005 GCCACACCAATCAAA GCAAGTCTGAACCTGTACCTTTCA CTT CGTGCGGTACAGGCTCAGA-TTGC TTTTTTTGAATGACT SAV0409 454403 - 453000 - | FtsK/SpoIIIE family protein TERM 422 454206 - 454187 - G 88 -7.9 -4.96848 | GTCCGCATACAAAAA GAGCAGT GAGAAT ACTGCTC CAAAAGTATGGCGTA SAV0410 455198 - 454425 - | hypothetical protein TERM 423 455113 - 455084 - G 77 -5.7 -5.00616 | opp_overlap 455084 TTTCTTCTGAAAAAA TCCCTAGAAAGTA TTTA CACAATCTAGGGA GTATCTTTGAATAAT SAV0411 455585 - 455208 - | hypothetical protein SAV0412 455920 - 455606 - | hypothetical protein TERM 424 456081 - 456058 - R 81 -4.5 -5.41746 | opp_overlap 456058, overlap 456060 AATTGGGTAAAAAAA TAGACGCTC CGTACT GAGCGTCCG ATTCCTACTATATTT TERM 425 456079 - 456060 - R 89 -9.3 -4.34482 | opp_overlap 456058, overlap 456058 TTGGGTAAAAAAATA GACGCTC CGTACT GAGCGTC CGATTCCTACTATAT SAV0413 457913 - 456120 - | hypothetical protein TERM 426 457769 - 457783 + g 80 -7.2 -4.50058 | ATCCATCGTGTTTAA TTGCTT GGT AAGCAA TTTTCCTTGTAAGTA SAV0414 460099 - 457910 - | hypothetical protein TERM 427 458068 - 458028 - G 71 -7.8 -3.7108 | gap 1 ATTGCTATATTCAAA TCAGCTGTATCA-CTTGTT TTTA AACTAGCTGATAAAGCTGA CAATTCTGTAGTTTC TERM 428 458444 - 458430 - G 70 -3.6 -4.93296 | opp_overlap 458430 GTATTAGCATAAAAA CAATTA ACC CAATTG TTTTCATTAAAAAGG tnp 461423 - 460233 - | transposase TERM 429 461610 - 461591 - R 78 -6.4 -4.70453 | opp_overlap 461591 AAGTAATATATAAAA GACGTTCA AATT CGAACGCC TCTCGTTAACCAAAT TERM 430 461672 - 461686 + r 91 -8.6 -4.70613 | opp_overlap 461682, overlap 461682 ACAGAGTATGATTAG GTGCAA AAA TTGCAC TTTTATTGCACTTTT TERM 431 461844 - 461815 - R 72 -7.9 -3.66274 | opp_overlap 461820, overlap 461820 AATAATTATATATAA TAAAACCACCTGT TTGC ACGGGTGGTTTTT AATTTGAGTAGTTGG TERM 432 461839 - 461820 - R 88 -7.8 -4.87592 | opp_overlap 461820, overlap 461815 TTATATATAATAAAA CCACCTGT TTGC ACGGGTGG TTTTTAATTTGAGTA TERM 433 461820 - 461839 + r 100 -10 -5.00138 | opp_overlap 461820 461815 TTATATATAATAAAA CCACCTGT TTGC ACGGGTGG TTTTTAATTTGAGTA SAV0416 462453 - 461917 - | hypothetical protein TERM 434 462746 - 462719 - R 100 -9.2 -5.72616 | overlap 462721 462731 ATTTATATAAAAAAA GAGGCCAGATGA CGTA TCATCTGACCTT CAGCTAAAACGCTGA TERM 435 462744 - 462721 - R 100 -11.8 -4.50122 | overlap 462719 462731 TTATATAAAAAAAGA GGCCAGATGA CGTA TCATCTGACC TTCAGCTAAAACGCT SAV0417 463549 - 462845 - | hypothetical protein SAV0418 464244 - 463948 - | transposase SAV0419 464633 - 464481 - | hypothetical protein SAV0420 465524 - 465165 - | hypothetical protein SAV0421 466388 - 465543 - | hypothetical protein set6 466860 - 467540 + | superantigen-like protein TERM 436 467531 - 467521 - f 82 -4 -5.59879 | GACAAATACAAAAAA TTCT AGT AGAA ATGAAATAATACTTT TERM 437 467595 - 467625 + F 100 -12 -5.40072 | opp_overlap 467594 467598 TTATGGAAATATATG GAAGTTAAGCGACG TAC TGTTGCTTAGCTTC TTTTTTTGAGGGGAA TERM 438 467813 - 467793 - f 75 -5.5 -4.69656 | AATTACGTAATAAAA CAATCTAAT TAT AATAGATTG GAGCATACAACTATG set7 467826 - 468521 + | superantigen-like protein TERM 439 468563 - 468596 + F 91 -9 -4.81083 | opp_overlap 468563 468566 TGAAATTGAAATAGA GAGGTTAAGTGACG ATCAAA CGTTGCTTAACTTC TTTTTAATGCTTAAA set8 468812 - 469882 + | superantigen-like protein set10 470246 - 470950 + | superantigen-like protein 5 TERM 440 470993 - 471022 + F 100 -10.1 -5.47159 | opp_overlap 471007 TATGGATAGTATAGA GGAGTTAGGCAAC ATAA GTTGCTTAGCTTC TTTTTTGTGTTGGCG TERM 441 471696 - 471684 - g 100 -9.1 -5.59879 | GATAAATATAAAAAA GGCCT TGA AGGCC AGAATGTCTTTGTGG set11 471396 - 472091 + | superantigen-like protein 7 TERM 442 472977 - 472967 - g 73 -4 -5.14563 | CTGTTGATTAAAAAA TACA AAC TGTA TGAAGGGTCAGCTGA set12 472430 - 473128 + | superantigen-like protein TERM 443 473160 - 473150 - f 74 -5.4 -4.88495 | ATATATAGAATAAAA GCTT AAG AAGC GGTTTAATAATCCCA set13 473505 - 474203 + | superantigen-like protein set14 474569 - 475252 + | superantigen-like protein SAV0430 475305 - 475463 + | hypothetical protein TERM 444 476367 - 476381 + G 71 -6.4 -4.16016 | CCGTAATGATGATAC GTTGGA AAA TCCAGC TTTCTTAGGCAATAC TERM 445 476738 - 476728 - g 73 -4 -5.1101 | overlap 476729 TTAGTATTTAAAAAA TGTT GCC AACA AGACGACAACGTATT hsdM 475516 - 477072 + | type I site-specific deoxyribonuclease LldI chain hsdS 477065 - 478276 + | restriction modification system specificity subunit TERM 446 478373 - 478394 + F 100 -8.7 -5.36441 | opp_overlap 478373 CGAACATTAAATTTA GGCACTGTG AAAG CGCAGTGTC TTTTTTGTGTCGAAA TERM 447 478697 - 478673 - g 82 -4.4 -5.40004 | opp_overlap 478675, overlap 478676 TATGAAATTAAAAAA TATTGCTAAA GCAAG TTTAGCACTA GGGATTTTAACAACA set15 478659 - 479342 + | superantigen-like protein TERM 448 479949 - 479937 - g 84 -5.5 -5.54338 | CAACTAAAAGAAAAA GATGG ACA CCACC AAGTTTTCATCGAAC SAV0434 479364 - 480851 + | hypothetical protein TERM 449 480924 - 480866 - T 75 -4.2 -5.28831 | gap 2, opp_overlap 480866, overlap 480882 ATTAATAAAATAAAA CAGCTTAATGATGTAATGAAATTAGTGA GTTAA TCACTGACTTCA--ACGTCATTGAGCTG TTTTTTATTTGCTTC TERM 450 480866 - 480924 + T 100 -8.6 -5.72053 | gap 2, opp_overlap 480866 480882 ATTAATAAAATAAAA CAGCTTAATGATGTAATGAAATTAGTGA GTTAA TCACTGACTTCA--ACGTCATTGAGCTG TTTTTTATTTGCTTC SAV0435 481267 - 481061 - | hypothetical protein lpl1 481604 - 482407 + | hypothetical protein lpl2 482438 - 483232 + | hypothetical protein lpl3 483277 - 484065 + | hypothetical protein SAV0439 484389 - 484871 + | hypothetical protein SAV0440 484932 - 485717 + | hypothetical protein lpl5 485736 - 486518 + | hypothetical protein lpl6 486575 - 487369 + | hypothetical protein TERM 451 487852 - 487834 - g 70 -4 -4.99134 | opp_overlap 487834, overlap 487842 AGTTGAAATGAAAAA TAATAAAA TTA TCTTATTA GATAAAGTAGAAGAT TERM 452 487857 - 487842 - g 77 -4.8 -5.16681 | opp_overlap 487834, overlap 487834 TGAAAAATAATAAAA TTATCT TATT AGATAA AGTAGAAGATATAAA lpl7 487421 - 488221 + | hypothetical protein lpl8 488240 - 489022 + | hypothetical protein TERM 453 489647 - 489629 - g 70 -4 -4.99134 | opp_overlap 489629, overlap 489637 489641 AGTTGAAATGAAAAA TAATAAAA TTA TCTTATTA GACAAGGTAGAAGAT lpl9 489201 - 490016 + | hypothetical protein TERM 454 490359 - 490338 - g 77 -5.9 -4.66938 | ATTTTCAAGACAAAA TGTTACCAA TGCT TTGGAAACA GTTAAAGATGGATAT SAV0446 490006 - 491331 + | hypothetical protein SAV0447 491328 - 491651 + | hypothetical protein SAV0448 491670 - 491984 + | hypothetical protein SAV0449 492473 - 492273 - | hypothetical protein SAV0450 492652 - 493854 + | putative cobalamin synthesis protein TERM 455 493931 - 493942 + T 78 -4.4 -5.48213 | opp_overlap 493925 493931 ATAAAAAGTTAAGAT GTTC TTAG GAAC TTTTTGTTTTCAATC TERM 456 494009 - 494036 + T 100 -9.2 -5.20783 | TGCATTTTATCCATA GGGCTAGGACAT GTAT GTGTCTTAGTCC TTTTTATATTTGCGT SAV0451 494411 - 494268 - | hypothetical protein TERM 457 494481 - 494456 - H 91 -9.7 -4.21322 | overlap 494451 TCAACACAAAGCAAA GCCACCATCCC TATT GGTATAGTGGC CTGAGAATTTTAAGT TERM 458 495318 - 495281 - H 77 -8.5 -3.82202 | opp_overlap 495281 495283 CACGCTTAAAGAGAA CACTGCAACAAGGTA TATCAACG TACCGTGATGCAGTG TCTAGTTAAACTGAA TERM 459 495281 - 495318 + H 75 -9.2 -2.91274 | opp_overlap 495281, overlap 495283 CACGCTTAAAGAGAA CACTGCAACAAGGTAT ATCAAC GTACCGTGATGCAGTG TCTAGTTAAACTGAA TERM 460 495335 - 495384 + H 95 -7.4 -5.69262 | opp_overlap 495335 495372 CTAGTTAAACTGAAA CCTGCAATAGTAAATTTTCTGC CATTAT GTACAGAATCTACTATTGTAGG TTTTTATTTTTATAC ndhF 495442 - 496926 + | NADH dehydrogenase subunit 5 SAV0453 496939 - 499644 + | hypothetical protein SAV0454 499806 - 500168 + | hypothetical protein SAV0455 500639 - 500397 - | hypothetical protein TERM 461 500463 - 500442 - G 71 -8.9 -2.99959 | opp_overlap 500446, overlap 500441 500444 ATATAATCGATAAAG TATACCTAA AAAA TTAGGTATA ATGACCATTGTTGCA SAV0456 500851 - 501525 + | hypothetical protein SAV0457 501562 - 502296 + | hypothetical protein SAV0458 502665 - 504005 + | sodium-dependent transporter TERM 462 504016 - 504049 + F 91 -4.8 -5.95539 | gap 2, opp_overlap 504016, overlap 504025 GTTAATATATAGAAG CATCTGA-C-ACACAA GTAT TTGTGTTGCTCAGGTG TTTTTTTGTTTGGAA cysM 504222 - 505127 + | cysteine synthase-like protein TERM 463 505190 - 505174 - g 71 -8.7 -2.96395 | opp_overlap 505173 ACGGACGACTATACA GGTGCAG TTA CTACACC AATTTATCAAACAAG yrhB 505120 - 506262 + | cystathionine gamma-synthase-like protein SAV0462 506557 - 507582 + | ABC transporter ATP-binding protein SAV0463 507586 - 508245 + | ABC transporter permease protein SAV0464 508282 - 509124 + | lactococcal lipoprotein TERM 464 509134 - 509172 + F 95 -10.5 -4.08958 | gap 1 AAATAAATTATATTG CGTCCTACAAGCA-AAGT TCAT GCTTATGTTTGTAGGGCG TTATTGTTTGACAAT SAV0465 509456 - 510259 + | N-acetylmuramoyl-L-alanine amidase TERM 465 510393 - 510434 + T 71 -6 -4.48221 | opp_overlap 510393, overlap 510388 TTTGTATAAGAAAAA GGATTGGTCGAATGAA CTTCATGTTC TATGTTCGACCAATCC TTTTCTGAATTAGTA TERM 466 510434 - 510393 - T 81 -5.5 -5.18726 | gap 3, opp_overlap 510388 510393 TTTGTATAAGAAAAA GGATTGGTCG-A-AT-GAAC TTCAT GTTCTATGTTCGACCAATCC TTTTCTGAATTAGTA SAV0466 510722 - 510444 - | hypothetical protein SAV0467 510862 - 511257 + | hypothetical protein SAV0468 511247 - 511732 + | hypothetical protein TERM 467 511872 - 511835 - T 77 -5.8 -4.87807 | TTAATATAGTAAAAA GCGACCTAGTGAACA-AT TGAC ATATATCCAC-AGGTCGC TTAACTTAAGTTATA SAV0469 512683 - 511901 - | hypothetical protein SAV0470 513792 - 512680 - | hypothetical protein gltC 514797 - 513913 - | transcription activator of glutamate synthase operon gltB 514978 - 519477 + | glutamate synthase large subunit gltD 519495 - 520958 + | glutamate synthase subunit beta TERM 468 521353 - 521381 + F 100 -9.7 -5.7827 | opp_overlap 521353 ACTATATATAATGAA GGTAAGTGCTCAA ATT TTGAGTATTTGCC TTTTTTATTTGTCTT TERM 469 521449 - 521484 + F 91 -4.9 -5.86976 | gap 1 CATTGAGATTGGAAG GGCATTTGGCT-TGTG CAATA TACATAGCTAAATGTC TTTTTTGTTTTGTGA treP 521788 - 523215 + | phosphoenolpyruvate-dependent and trehalose-specific PTS enzyme II TERM 470 523229 - 523251 + F 70 -5.5 -4.27467 | AATAAAATAAAAAAG GGGCGTTCG TTATT TGGACGTCC TTTATTACGTTATAA SAV0475 523279 - 524919 + | alpha-glucosidase SAV0476 524944 - 525672 + | trehalose operon transcription repressor treR SAV0477 526315 - 526839 + | hypothetical protein TERM 471 527733 - 527709 - g 77 -5.7 -5.02074 | GCATCTTTTAAAAAA TACCATCAGTT TAT AACAGAGGGTA AAGAAGTGAATCGCC TERM 472 528166 - 528152 - g 88 -7.2 -4.93595 | ACAAAAATCTAAAAA TGCATT TTC AATGCA ACAAATTGCAAAAGT dnaX 526908 - 528605 + | DNA polymerase III gamma and tau subunits SAV0479 528695 - 529012 + | hypothetical protein TERM 473 529069 - 529104 + G 74 -6.8 -4.30978 | opp_overlap 529068 529089 TAGCTTTATGAAATT GCCAGGCATTGGTC CAAAGACA GCCCAACGTCTGGC TTTTCATACCTTAGA recR 529019 - 529615 + | recombination protein RecR TERM 474 529653 - 529690 + F 100 -12.3 -2.6891 | opp_overlap 529656 529661 529663, overlap 529661 AATTTAATACTATAG TAAGAAAAGTCACAGTG TAAT CATTGTGGCTTTTTTTA TGGTGTGGTGTGATG TERM 475 529661 - 529682 + F 95 -7.3 -5.69473 | opp_overlap 529656 529661 529663, overlap 529653 ACTATAGTAAGAAAA GTCACAGTG TAAT CATTGTGGC TTTTTTTATGGTGTG TERM 476 530434 - 530418 - f 79 -5.9 -5.09426 | overlap 530419 GTTAATTCCAAAAAA CGTAACT ATA AGTTACA AACATTATTTAGTAT TERM 477 530680 - 530659 - f 83 -10.3 -3.25079 | overlap 530657 TAATACCGGATAATA TTTTGAACC GCAT GGTTCAAAA GTGAAAGACGGTCTT TERM 478 531111 - 531093 - f 71 -8.8 -2.75963 | overlap 531092 AGTCTGATGTGAAAG CCCACGGC TCA ACCGTGGA GGGTCATTGGAAACT TERM 479 532091 - 532118 + F 73 -3.7 -5.27477 | gap 1, overlap 532086 532084 532092 ACATATTGTATTCAG T-TTTGAATGTT TATTT AACATTCAAATA TTTTTTGGTTAAAGT TERM 480 532092 - 532116 + F 84 -8.8 -4.26777 | overlap 532086 532084 532091 CATATTGTATTCAGT TTTGAATGTT TATTT AACATTCAAA TATTTTTTGGTTAAA TERM 481 532312 - 532285 - f 70 -5.6 -4.28115 | ATTCATAAGAAATAA TCGCTAGTGTTC GAAA GAACACTCACAA GATTAATAACGCGTT TERM 482 532688 - 532669 - f 90 -10.8 -3.66803 | opp_overlap 532668 532667 CGGGAAGAGCCCAAA CCAACAAG CTTG CTTGTTGG GGTTGTAGGACACTC TERM 483 535530 - 535545 + F 100 -9 -6.06529 | GCGATGAGCCGCATT GAGACC GCAA GGTCTC TTTTTTTTATGTCTA TERM 484 535808 - 535823 + F 100 -9 -5.76633 | GCGATGAGCCGCATT GAGACC GTGA GGTCTC TTTTTTTATGTCTAA TERM 485 536185 - 536226 + F 100 -11.1 -4.89729 | opp_overlap 536185 536181 536180 ATTATAAAAAGTGAA CAGCAGTAAGATAGTTTTT AATC ATAAATCATCTTACTGCTG TTTTTAGATTTTATG TERM 486 536226 - 536185 - f 87 -11.1 -3.4968 | opp_overlap 536185, overlap 536181 536180 ATTATAAAAAGTGAA CAGCAGTAAGATAGTTTTT AATC ATAAATCATCTTACTGCTG TTTTTAGATTTTATG SAV0481 536406 - 537743 + | lysine decarboxylase TERM 487 538119 - 538107 - g 71 -6.3 -4.183 | CGAATTTGCAATAAA TGGAT TAT ATCCA GACTTGACGATTTAT tmk 537745 - 538362 + | thymidylate kinase-like protein SAV0483 538390 - 538719 + | hypothetical protein TERM 488 538697 - 538713 + F 70 -5.2 -4.53636 | TATTTGTTATGCCAG TTGATG CATTC CATCAA TTTTAATTCTATAAT TERM 489 539173 - 539152 - g 72 -5.9 -4.34223 | opp_overlap 539151, overlap 539155 AATGCAATTAAGAAA GAACAAGTT GAAC AACTTGTGC GTCATATGAATCAAC TERM 490 539170 - 539155 - g 72 -6.2 -4.27694 | opp_overlap 539151, overlap 539152 GCAATTAAGAAAGAA CAAGTT GAAC AACTTG TGCGTCATATGAATC TERM 491 539635 - 539614 - g 91 -4.5 -5.93252 | GCTAAAAATAAAAAA CTGCAAT CTTTAACT ATTGCAG CTGTGAATGGTTTCT TERM 492 539726 - 539715 - g 71 -3 -5.09895 | TAGTGATTTAAAAAA TGAT ATTG ATCA ATATGCGCAAAAGTT holB 538933 - 539859 + | DNA polymerase III delta prime subunit SAV0485 540028 - 540663 + | signal peptidase II-like protein SAV0486 540659 - 541027 + | DNA replication intiation control protein YabA TERM 493 541079 - 541103 + F 75 -7.2 -4.06361 | opp_overlap 541079 541091 ATATGGTTTGGATAA GTCTGAGACA ATGCA TGTTTCAGGC TTTAATTGTGTATAA TERM 494 541230 - 541218 - f 72 -4.9 -4.87318 | GTTAAAAGTCAAAAA TACAT CGA ATGTA GTTAGGCATATAATA TERM 495 541461 - 541471 + G 71 -6.8 -4.16033 | TATGTTCAGGCAATG GGGT GAT ACCC TTGTTATTGTTTGCG TERM 496 541651 - 541609 - g 76 -6.7 -4.62783 | gap 1, opp_overlap 541609 CATGGATTTGAAAAA CGTTACTAAAGTAT-TTA AACCTTCA CAATATACTTTAGTAACG TGTAATCCGCCTTAT SAV0487 541301 - 542026 + | hypothetical protein SAV0488 542019 - 542267 + | hypothetical protein SAV0489 542269 - 543108 + | hypothetical protein TERM 497 543583 - 543573 - g 71 -3.2 -5.17507 | AAAATTCAAGAAAAA GCTC AAA AAGC TGGTAAGACAGAAAT TERM 498 543870 - 543856 - g 87 -10 -4.08216 | TTATTGGTGGCAAAA GTCCAG ATT CTGGAC ACGAAGTTGAACTAG metS 543393 - 545366 + | methionyl-tRNA synthetase SAV0491 545397 - 546170 + | putative deoxyribonuclease TERM 499 546289 - 546263 - f 81 -7.4 -4.54727 | TTTTTTAAATTAAAA TATCGTACATGT GCA ATACGTACGATA GAGATGGTTAGAGCT SAV0492 546337 - 546873 + | hypothetical protein ksgA 546884 - 547777 + | dimethyladenosine transferase veg 547877 - 548140 + | hypothetical protein TERM 500 548204 - 548230 + F 100 -8.8 -5.27335 | TTATGATAATTATTT GAGTGTTGGGCA TTA TGTTCAATACTC TTTTTATTTACAAAA SAV0495 548450 - 549298 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 501 549604 - 549616 + G 73 -4.1 -4.96501 | AGAAAGAACGTTTGT TACCT GGC GGGTA TTTATTTTTATCAGA purR 549312 - 550136 + | purine operon repressor SAV0497 550153 - 550533 + | translation initiation inhibitor-like protein spoVG 550605 - 550907 + | regulatory protein SpoVG TERM 502 550958 - 550988 + F 100 -12.7 -5.75822 | TAAGTTGATTTGATA CTGTCGATAAAGC ATAAA GCTTTGTCGGCAG TTTTTTTAGTTTGTA gcaD 551314 - 552666 + | UDP-N-acetylglucosamine pyrophosphorylase-like protein prs 552813 - 553778 + | ribose-phosphate pyrophosphokinase TERM 503 554013 - 553997 - g 75 -5.1 -4.85618 | overlap 553998 AAACAATTAAGAAAA TCTGGTA AAG TACCAGC AGTAGTATACGGTTA TERM 504 554012 - 553998 - g 75 -8.6 -3.48931 | overlap 553997 AACAATTAAGAAAAT CTGGTA AAG TACCAG CAGTAGTATACGGTT TERM 505 554220 - 554184 - g 74 -6.7 -4.33653 | overlap 554187 CACTTAAAAACCAAA TTACTCACATTGACTTC TTA GCAATCAATATGAGTGA AGAACGTACTGTTGA rplY 553928 - 554581 + | 50S ribosomal protein L25/general stress protein Ctc TERM 506 554624 - 554655 + F 100 -10.3 -5.21506 | opp_overlap 554624 554644, overlap 554621 TACTTTGTTTAACAA GCACTGTGCTTAT TTTAAT ATAAGCATGGTGC TTTTTGTGTTATTAT TERM 507 554716 - 554674 - f 71 -6.6 -3.96148 | opp_overlap 554670 554676, overlap 554675 TTGTGTTATTATAAA GCTTAATTAAACTTTATTAC TTT GTACTAAAGTTTAATTAATT TTAGTGAGTAAAAGA TERM 508 554715 - 554675 - f 77 -10.1 -2.97475 | opp_overlap 554670 554676, overlap 554674 TGTGTTATTATAAAG CTTAATTAAACTTTATTAC TTT GTACTAAAGTTTAATTAAT TTTAGTGAGTAAAAG TERM 509 554676 - 554714 + F 100 -13.6 -4.2828 | opp_overlap 554675 554674, overlap 554670 GTGTTATTATAAAGC TTAATTAAACTTTATTAC TTT GTACTAAAGTTTAATTAA TTTTAGTGAGTAAAA pth 554892 - 555464 + | peptidyl-tRNA hydrolase TERM 510 556949 - 556929 - g 76 -4.1 -5.07107 | opp_overlap 556934 CAAATGCTGAAAAAA TTAAGTCTT ACC AAGATTTAA ATGTGGGAGATTATA TERM 511 557211 - 557180 - g 74 -2.4 -5.55855 | gap 1, overlap 557186 557187 TGGAAAAAAACAAAA GCAA-AAGTTCAACA AAG TGTTGAAGATATTGC TGAAGAGTTGATTGA TERM 512 557204 - 557186 - g 73 -4.6 -4.83677 | overlap 557180 557187 AAAACAAAAGCAAAA GTTCAACA AAG TGTTGAAG ATATTGCTGAAGAGT TERM 513 557203 - 557187 - g 72 -8.1 -3.46546 | overlap 557186 557180 AAACAAAAGCAAAAG TTCAACA AAG TGTTGAA GATATTGCTGAAGAG mfd 555464 - 558970 + | transcription-repair coupling factor SAV0504 558960 - 560486 + | low temperature requirement B protein SAV0505 560486 - 561679 + | nucleoside triphosphate pyrophosphohydrolase-like protein SAV0506 561676 - 561939 + | ribosome-associated heat shock protein SAV0507 561957 - 562349 + | cell-division initiation protein SAV0508 562454 - 562855 + | hypothetical protein TERM 514 562939 - 562968 + F 81 -6.5 -5.02323 | opp_overlap 562936 562941, overlap 562923 562941 AGCGTTAGACAATCT AAGACTGTTTCTT AAAT AAGGAGCAGTCTC TTTTATTTGTAATGA TERM 515 562941 - 562966 + F 88 -9.1 -4.12652 | opp_overlap 562936 562941, overlap 562923 562939 CGTTAGACAATCTAA GACTGTTTCTT AAAT AAGGAGCAGTC TCTTTTATTTGTAAT SAV0509 563035 - 564330 + | hypothetical protein SAV0510 564335 - 564874 + | hypoxanthine-guanine phosphoribosyltransferase-like protein TERM 516 565355 - 565337 - g 83 -6.1 -5.0925 | opp_overlap 565336 TGGTAAAACGAAAAA TGATGAA GACTA TTCATCA ACTATTTTATATAAC TERM 517 565464 - 565452 - g 87 -6.3 -5.40014 | AAAGAAGAAGAAAAA CAAAG TGT CTTTG TGAGTATACTTTCAA ftsH 565131 - 567224 + | cell-division protein TERM 518 567238 - 567274 + F 100 -16.9 -4.72556 | opp_overlap 567234 567271 AATCGATTATATTCA GTACCTCTTTCTATGAT AAA GTTATAGAAAGAGGTAC TTTTATCGTTTTTAA SAV0512 567452 - 568333 + | heat-shock protein HSP33-like protein cysK 568512 - 569444 + | cysteine synthase (o-acetylserine sulfhydrylase)-like protein TERM 519 569491 - 569461 - f 70 -5.5 -4.19704 | opp_overlap 569461 TAATGTCATTTAAAA GAGTGAGTTATCT TTTTG AGATAACTTGCTC TTTTTTTCTACCATG TERM 520 569461 - 569491 + F 100 -10.6 -5.626 | opp_overlap 569461 TAATGTCATTTAAAA GAGTGAGTTATCTT TTT GAGATAACTTGCTC TTTTTTTCTACCATG folP 569660 - 570463 + | dihydropteroate synthase TERM 521 570736 - 570726 - g 77 -5.4 -4.94058 | GTAATGGAAACAAAA GTGA GAA TCAC TAAAGAAAACCCACC folB 570441 - 570806 + | dihydroneopterin aldolase folK 570803 - 571279 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase lysS 571818 - 573305 + | lysyl-tRNA synthetase TERM 522 573329 - 573359 + T 100 -9.8 -4.81852 | GATTGTTAGTAAGAG CTCTCGTGTATACA ACA TGTGTATGCGAGGG TTTTCTTAATTATGG TERM 523 574311 - 574295 - T 78 -9.5 -3.22475 | overlap 574298 TTCAGCGGTAGAATA CAACCTT GCC AAGGTTG GGGTCGCGGGTTCGA TERM 524 574795 - 574779 - T 79 -5.9 -5.09426 | overlap 574780 GTTAATTCCAAAAAA CGTAACT ATA AGTTACA AACATTATTTAGTAT TERM 525 575041 - 575020 - T 83 -10.3 -3.25079 | overlap 575018 TAATACCGGATAATA TTTTGAACC GCAT GGTTCAAAA GTGAAAGACGGTCTT TERM 526 575472 - 575454 - T 71 -8.8 -2.75963 | overlap 575453 AGTCTGATGTGAAAG CCCACGGC TCA ACCGTGGA GGGTCATTGGAAACT TERM 527 576690 - 576664 - T 74 -6.6 -4.28115 | ATTCATAAGAAATAA TCGCTAGTGTTC GAA GAACACTCACAA GATTAATAACGCGTT TERM 528 579862 - 579877 + T 100 -9 -6.06529 | GCGATGAGCCGCATT GAGACC GCAA GGTCTC TTTTTTTTATGTCTA TERM 529 580222 - 580263 + T 73 -6 -4.65584 | gap 1, opp_overlap 580222 TGTATAAATAGAGAA GAGCAGTAAGA-CGGTATC TAATT GAAAATGATCTTACTGCTC TTTTATATACTTTAT SAV0518 581740 - 580358 - | GntR family transcription regulator TERM 530 580581 - 580601 + g 73 -8.3 -3.56262 | overlap 580579 TGCATACCCGTTTCA GCACCTTGA ATA TCAAGCTGC TCTTTGTAAGGTTTC TERM 531 581038 - 581048 + g 80 -2.6 -5.75599 | GATGGGAAGGCGTTA TATA TAC TATA TTTTTTTGTGATTTA TERM 532 581675 - 581691 + g 70 -2.3 -5.25976 | opp_overlap 581678, overlap 581678 TTTATCGCCTTCTTT AAATTGA CCT TCAATTA TTTGTTTTTTTAATT SAV0519 581844 - 582731 + | pyridoxine biosynthesis protein SAV0520 582735 - 583295 + | glutamine amidotransferase subunit PdxT TERM 533 583353 - 583384 + T 89 -6.7 -5.36441 | opp_overlap 583353 583348 583356, overlap 583356 TTGTTGAGAAGAAAA TATCTCCTTCAAA CTTAGC TTTGGAGGAGTTA TTTTTTATGTCAAAA TERM 534 583384 - 583353 - T 71 -4.5 -4.77165 | opp_overlap 583353 583356, overlap 583348 583356 TTGTTGAGAAGAAAA TATCTCCTTCAAA CTTAGC TTTGGAGGAGTTA TTTTTTATGTCAAAA TERM 535 583356 - 583381 + T 87 -8.4 -4.77122 | opp_overlap 583356 583353 583348, overlap 583353 TTGAGAAGAAAATAT CTCCTTCAAA CTTAGC TTTGGAGGAG TTATTTTTTATGTCA nupC 584717 - 583503 - | pyrimidine nucleoside transport protein TERM 536 584289 - 584301 + g 71 -7.7 -3.62644 | opp_overlap 584285 TTGTCCTAAAATTGC TGCAG CAA CTGCA TTGTATGATTCTAAA ctsR 584875 - 585336 + | transcription repressor of class III stress genes-like protein SAV0523 585355 - 585921 + | hypothetical protein SAV0524 585911 - 586918 + | ATP:guanido phosphotransferase TERM 537 589258 - 589246 - g 72 -2.7 -5.38047 | opp_overlap 589247, overlap 589247 GAGCGATACAAAAAA CTATC GAA GATAA TTTAAGTGAATTAAT clpC 586932 - 589388 + | endopeptidase TERM 538 589426 - 589397 - f 76 -6.5 -4.59069 | opp_overlap 589397, overlap 589392 AGCATAATTATAAAA CAGTCCAAAAC AAATTAAA GTTTTGGGCTG TTTTTTTAGTAGCAT TERM 539 589397 - 589426 + F 100 -8.7 -5.52986 | opp_overlap 589397 589392 AGCATAATTATAAAA CAGTCCAAAAC AAATTAAA GTTTTGGGCTG TTTTTTTAGTAGCAT radA 589873 - 591237 + | DNA repair protein RadA SAV0527 591262 - 592335 + | hypothetical protein TERM 540 593475 - 593462 - g 74 -2.3 -5.44119 | GTTATCGTAAAAAAA GATGG CATT CCAAC GTACAATTTTGCAGT TERM 541 593904 - 593888 - g 76 -3.7 -5.35815 | overlap 593890 TATATGAAACAAAAA GATACTG AAA CAGTATT CCAATTAGCATTACC TERM 542 593902 - 593890 - g 74 -6.3 -4.29436 | overlap 593888 TATGAAACAAAAAGA TACTG AAA CAGTA TTCCAATTAGCATTA gltX 592892 - 594346 + | glutamyl-tRNA synthetase TERM 543 594666 - 594701 + F 100 -10.6 -5.32699 | gap 1, opp_overlap 594679 TGGAACCGTGCGGAA GCGCCTCTAACAATACA ATT TGTAT-GTTAGTGGTGC TTTTTTGATATTTAA cysE 594775 - 595416 + | Serine acetyltransferase-like protein TERM 544 595886 - 595859 - gf 77 -8.6 -3.61103 | GAAGGTTATGGTAAA TTAAGTCATCAA TCCA TAGATGACTTAA AAGTGGGTGCTCGTA TERM 545 596439 - 596451 + GF 71 -6.3 -4.10007 | TTGATCAAATTGATG CGATT TTA AATCG TTTTGAAACAGTTAT TERM 546 596711 - 596701 - gf 70 -4 -4.93547 | TGAAGCAAGGAAAAA CAAA GAT TTTG CACGAGCAGATGAGA cysS 595370 - 596800 + | cysteinyl-tRNA synthetase cysS 596793 - 597197 + | hypothetical protein TERM 547 597370 - 597380 + G 70 -4 -5.02074 | opp_overlap 597370 CAAACTGTACCAAAA TCTA AAT TAGA TTTTTTAGCAAATGC SAV0531 597205 - 597951 + | putative tRNA/rRNA methyltransferase SAV0532 597951 - 598475 + | hypothetical protein SAV0533 598556 - 599125 + | hypothetical protein secE 599439 - 599621 + | preprotein translocase subunit SecE nusG 599634 - 600182 + | transcription antitermination protein TERM 548 600177 - 600195 + F 72 -7.6 -3.65046 | opp_overlap 600177 600176 GATCAAATAGAAAAG CTTTAATT AAC AATTAAAG TTATTAAACTAACCA TERM 549 600195 - 600177 - f 71 -7.6 -3.48193 | opp_overlap 600177, overlap 600176 GATCAAATAGAAAAG CTTTAATT AAC AATTAAAG TTATTAAACTAACCA TERM 550 600262 - 600284 + F 74 -7.6 -3.72893 | AGTGTTAAAATTATG TGGTCGCGCT TTT AGAGCGCCCA TTTCGTCACGAAATG SAV0536 600320 - 600370 + | hypothetical protein TERM 551 600637 - 600624 - gf 80 -6.7 -4.65895 | GCTGGTATTGAAAAA GGTTC AGGC GAACC AAACAAAACTAAAGT rplK 600363 - 600785 + | 50S ribosomal protein L11 TERM 552 601317 - 601303 - g 76 -4.2 -5.04987 | opp_overlap 601312, overlap 601304 AATACGTTCAAAAAA TCCAAC AAG GTTGGT TCGACTTCGATGTAG TERM 553 601316 - 601304 - g 71 -7.7 -3.61908 | opp_overlap 601312, overlap 601303 ATACGTTCAAAAAAT CCAAC AAG GTTGG TTCGACTTCGATGTA rplA 600993 - 601685 + | 50S ribosomal protein L1 TERM 554 601738 - 601699 - f 70 -5.8 -4.20027 | opp_overlap 601699 601709, overlap 601702 AATAAATGATATAAA CAATTACAGGCTGAAAGA AATA TCTTTCAGTCTGTAAAAA TATATTGACAATAAG TERM 555 601735 - 601702 - f 100 -14.1 -4.19324 | opp_overlap 601699 601709, overlap 601699 AAATGATATAAACAA TTACAGGCTGAAAGA AATA TCTTTCAGTCTGTAA AAATATATTGACAAT TERM 556 601709 - 601728 + F 75 -9.4 -2.8937 | opp_overlap 601702 601699, overlap 601699 ATAAACAATTACAGG CTGAAAGA AATA TCTTTCAG TCTGTAAAAATATAT TERM 557 601878 - 601904 + F 100 -12.4 -5.9003 | opp_overlap 601881 601901 TCTATGATCTTTCAA GCACTTTTTGCC GTG GGTAGAAAGTGC TTTTTTTATTAATTT TERM 558 601931 - 601901 - f 86 -10 -3.85698 | opp_overlap 601878 TGCCGTGGGTAGAAA GTGCTTTTTTTA TTAATTT TAAAAAAAGCAC CAAAAATTTAAATGG rplJ 601957 - 602457 + | 50S ribosomal protein L10 TERM 559 602466 - 602448 - f 71 -3.1 -5.18715 | overlap 602458 ACAAAAAGAAGAAAA CGCTGAA TAATT TTTAGCG TAAAAAAATTAAAAA TERM 560 602686 - 602660 - g 70 -2.3 -5.31275 | CTGCAGCAGAAAAAA CTGAATTTGAC GTTGA GTTAACTTCAG CTGGTTCATCTAAAA rplL 602500 - 602868 + | 50S ribosomal protein L7/L12 TERM 561 602900 - 602920 + F 77 -9.9 -2.90492 | opp_overlap 602898 602897, overlap 602892 TTAATAATCAAAGTT TTATAGCAA GTA TTGCTATAA TATAATGATTCTTTG TERM 562 602974 - 602941 - f 100 -14.1 -2.57564 | opp_overlap 602942 602947, overlap 602947 TGATTCTTTGAGAAG TTAAAACCCCGTTAT TTTG ATAACGGGGTTTTAT TCATTTAAAGACTGA TERM 563 602942 - 602973 + F 100 -17.6 -3.51708 | opp_overlap 602941 602947, overlap 602947 GATTCTTTGAGAAGT TAAAACCCCGTTAT TTTG ATAACGGGGTTTTA TTCATTTAAAGACTG TERM 564 602968 - 602947 - f 100 -13.1 -4.3208 | opp_overlap 602942 602947, overlap 602941 TTTGAGAAGTTAAAA CCCCGTTAT TTTG ATAACGGGG TTTTATTCATTTAAA TERM 565 602947 - 602968 + F 100 -13.1 -4.84642 | opp_overlap 602947 602941, overlap 602942 TTTGAGAAGTTAAAA CCCCGTTAT TTTG ATAACGGGG TTTTATTCATTTAAA SAV0541 603043 - 603651 + | hypothetical protein TERM 566 603917 - 603905 - g 71 -7.7 -3.66883 | GGAAGACATCGTAAA CGTAG AAA CTACG CGAGAATTTCAGAAG TERM 567 604745 - 604733 - g 73 -4.1 -4.88407 | TTATTTAATCAAAAA TTAGC TGA GCCAA TTGTAAATACTGAAA rpoB 603866 - 607417 + | DNA-directed RNA polymerase subunit beta rpoC 607554 - 611177 + | DNA-directed RNA polymerase subunit beta' TERM 568 611186 - 611216 + F 100 -10.7 -5.00642 | gap 1, opp_overlap 611189 611191, overlap 611191 GGAATAACAAGTATA TAACA-GAGGCTAA TGCT TTAGCCTCTTGTTA TTTTTATGTAAATTA TERM 569 611212 - 611189 - f 74 -8.2 -3.65434 | opp_overlap 611186 611191, overlap 611191 ATAACAAGTATATAA CAGAGGCTAA TGCT TTAGCCTCTT GTTATTTTTATGTAA TERM 570 611191 - 611210 + F 100 -10.8 -4.37863 | opp_overlap 611189 611191, overlap 611186 AACAAGTATATAACA GAGGCTAA TGCT TTAGCCTC TTGTTATTTTTATGT TERM 571 611210 - 611191 - f 87 -10.8 -3.39274 | opp_overlap 611191 611186, overlap 611189 AACAAGTATATAACA GAGGCTAA TGCT TTAGCCTC TTGTTATTTTTATGT TERM 572 611385 - 611375 - g 74 -6.8 -4.41348 | TTGGTCTTAAAGAAA CGCT TAA AGCG TTAAAGAAAGATCAA SAV0544 611314 - 611568 + | putative ribosomal protein L7Ae-like TERM 573 611571 - 611595 + F 74 -5.1 -4.88918 | opp_overlap 611572, overlap 611566 611572 ATTGATTAAATGAGA ATTAGTAAGTG TTT TACTTACTAAA TTTTATTTAACCTAA TERM 574 611572 - 611594 + F 76 -8.6 -3.52628 | opp_overlap 611572, overlap 611571 611566 TTGATTAAATGAGAA TTAGTAAGTG TTT TACTTACTAA ATTTTATTTAACCTA TERM 575 611594 - 611572 - f 72 -7.9 -3.62849 | opp_overlap 611572 611571 611566 TTGATTAAATGAGAA TTAGTAAGT GTTTT ACTTACTAA ATTTTATTTAACCTA rpsL 611666 - 612079 + | 30S ribosomal protein S12 rpsG 612145 - 612615 + | 30S ribosomal protein S7 TERM 576 612885 - 612856 - g 72 -5.8 -4.42386 | GCCGTATCCACAAAA TTGGTGAAACAC ACGAAG GTGCTTCACAAA TGGACTGGATGGAGC TERM 577 613096 - 613080 - g 72 -9.5 -2.71364 | TCAGGTGTTGAACCA CAAACTG AAA CAGTTTG GCGTCAGGCTACAAC fus 612738 - 614819 + | elongation factor G TERM 578 614956 - 614994 + F 74 -9.1 -2.88634 | opp_overlap 614956 614959, overlap 614955 614950 614959 TTGCATCGCTATAAA TAATTTCTCATGATGGT GAGAA ACTATCATGAGAGATAA ATTTAAATATTATTT TERM 579 614959 - 614991 + F 82 -10.8 -2.67958 | opp_overlap 614956 614959, overlap 614956 614955 614950 CATCGCTATAAATAA TTTCTCATGATGGT GAGAA ACTATCATGAGAGA TAAATTTAAATATTA TERM 580 614991 - 614959 - f 70 -6.4 -4.07133 | opp_overlap 614956 614955 614950 614959, overlap 614956 CATCGCTATAAATAA TTTCTCATGATGGT GAGAA ACTATCATGAGAGA TAAATTTAAATATTA TERM 581 615138 - 615121 - g 71 -7.7 -3.53836 | opp_overlap 615121 615123, overlap 615130 GTAAAACAACATTAA CAGCAGC AATC GCTACTG TATTAGCAAAAAATG tuf 615036 - 616220 + | elongation factor Tu TERM 582 616240 - 616285 + T 82 -10.7 -2.81535 | opp_overlap 616250 616253 616256, overlap 616253 TAATTTCTTAGATTT TATATAAAAAGAAGATCCCTC AATC GAGGGGTCTTTTTTTAATGTG TAAATTTTGTAATGG TERM 583 616275 - 616250 - T 80 -6.1 -4.9792 | opp_overlap 616240 616253, overlap 616253 616256 GATTTTATATAAAAA GAAGATCCCTC AATC GAGGGGTCTTT TTTTAATGTGTAAAT TERM 584 616253 - 616272 + T 100 -10 -5.60864 | opp_overlap 616253 616250 616256, overlap 616240 TTTATATAAAAAGAA GATCCCTC AATC GAGGGGTC TTTTTTTAATGTGTA TERM 585 616272 - 616253 - T 83 -7.8 -4.58943 | opp_overlap 616240 616253, overlap 616250 616256 TTTATATAAAAAGAA GATCCCTC AATC GAGGGGTC TTTTTTTAATGTGTA TERM 586 616399 - 616457 + T 100 -14.9 -3.65294 | opp_overlap 616404, overlap 616404 GAGTCTTAGACATTG TAAAATGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCTACTTTGAAGGGAGCATTTCA TTAGTTTATGTCCCA TERM 587 616452 - 616404 - T 100 -14.8 -4.18401 | opp_overlap 616399 616404 TTAGACATTGTAAAA TGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCTACTTTGAAGGGAGCA TTTCATTAGTTTATG TERM 588 616404 - 616452 + T 100 -14.8 -4.06001 | opp_overlap 616404, overlap 616399 TTAGACATTGTAAAA TGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCTACTTTGAAGGGAGCA TTTCATTAGTTTATG SAV0549 617677 - 616502 - | N-acyl-L-amino acid amidohydrolase TERM 589 618386 - 618373 - g 71 -5.3 -4.46073 | GGTCAATACAATAAA GTGAT GTAT ATCAC TGATGGCGTTTTTAG SAV0550 617848 - 619035 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 590 619051 - 619075 + F 100 -10.7 -5.66989 | overlap 619052 TATTTATTTATTTAT TCCCACGGCAA ATA TTGTCGTGGGC TTTTTTTAATGTTTA TERM 591 619052 - 619074 + F 100 -14.2 -3.97753 | overlap 619051 ATTTATTTATTTATT CCCACGGCAA ATA TTGTCGTGGG CTTTTTTTAATGTTT TERM 592 619751 - 619733 - g 70 -4.6 -4.74132 | AGATGTGATTAAAAA TGAATTAG GAC CTGATTCA GACTATTTATCTGTC SAV0551 619305 - 620183 + | chaperone protein HchA TERM 593 620197 - 620181 - f 74 -5.3 -4.88163 | GCAATACAAAATAAA TAATTAA ATA TTAATTA GAGGAGCCTCATATG TERM 594 620201 - 620229 + F 91 -5.4 -5.75342 | gap 1, overlap 620204 AAATATTAATTAGAG GAG-CCTCATATG TAAA TGTATGAGGACTC TTTTTTTTGGCAAAA araB 620342 - 621979 + | ribulokinase SAV0553 622193 - 623158 + | UDP-glucose 4-epimerase related protein ilvE 623494 - 624570 + | branched-chain amino acid aminotransferase SAV0555 624820 - 625503 + | putative phosphoglycolate phosphatase SAV0556 626281 - 625619 - | deoxypurine kinase SAV0557 626891 - 626274 - | deoxypurine kinase SAV0558 626958 - 627428 + | cytosine deaminase SAV0559 627575 - 628444 + | hypothetical protein SAV0560 628466 - 629032 + | hypothetical protein TERM 595 629066 - 629114 + F 83 -2 -5.89921 | gap 2, overlap 629087 TATACATTAAAAATA GGTATGTAGCTTAA-GGTATT-TC ATT GAGAATGCTTTTAAGTCACATGCC TTTTTTTGTTCTAAT TERM 596 629693 - 629679 - g 70 -4.3 -4.80959 | overlap 629690 CAAGTGAGAATAAAA CAACT GAAAA AGTTG ATAGTCGTCAACTAA sdrC 629462 - 632323 + | Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein TERM 597 632338 - 632356 + F 95 -8.1 -5.56264 | opp_overlap 632326 632338 ATATGATTAACTTAA CCAGGTC CATGT GGCCTGG TTTTTTCTGTTTAGA TERM 598 632984 - 632969 - g 70 -4 -4.95876 | AATGATAATCAAAAA GAAATG GTAT CATCTC AAGGTAATGAAACGA TERM 599 633950 - 633968 + G 84 -11.8 -2.76689 | opp_overlap 633949, overlap 633949 GGAAATGTTGAAGAC CCTGGTTA CTA TAACCAGG TAGTATATGTTAATC TERM 600 634788 - 634774 - g 76 -2.8 -5.4433 | AGATACAAATAAAAA TGGTAT CCA AGACCA AGATGAAAAAGGTAT TERM 601 636750 - 636728 - g 100 -9.2 -4.70353 | overlap 636729 CACAATAAAGCAAAA GCATTACCAG AAA CTGGTAATGA AAATAGTGGCTCAAA TERM 602 636749 - 636729 - g 93 -12.7 -3.40585 | overlap 636728 ACAATAAAGCAAAAG CATTACCAG AAA CTGGTAATG AAAATAGTGGCTCAA sdrD 632690 - 636847 + | Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein TERM 603 636859 - 636877 + F 95 -8.1 -5.63517 | ATAATACAGCTTATA CCAGGTC CGTGA GGCCTGG TTTTTTATTTCAAAA TERM 604 640580 - 640602 + G 75 -10 -2.71101 | opp_overlap 640576 640585, overlap 640585 AGTGAAAATAACGGC TCAAATAACG CAA CGTTATTTGG TGGATTATTTGCAGC sdrE 637241 - 640666 + | Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein TERM 605 640678 - 640696 + F 100 -8.1 -6.2845 | opp_overlap 640677 ATAATACAATATGAC CCAGGTC CTTGT GGCCTGG TTTTTTTTTATGATT TERM 606 641574 - 641562 - g 75 -4.9 -4.87786 | GTAATGGTATAAAAA GTTTT TAT AAAAC AGTATTTAATAATTT SAV0564 640787 - 642259 + | poly (glycerol-phosphate) alpha-glucosyltransferase SAV0565 643874 - 642384 - | poly (glycerol-phosphate) alpha-glucosyltransferase TERM 607 643284 - 643312 + g 77 -3.3 -5.39755 | opp_overlap 643285, overlap 643285 TTCATTATTAAAGAA ATATTGTTTGTTA GCA TAGTAAACAATAA TTTTTTGTACTTCTG TERM 608 644135 - 644116 - R 100 -10 -5.21236 | opp_overlap 644116 AAGGTATAATAAAAA CGCGCAAC TAAT GTTACGCG TTTGAATTAATCATA TERM 609 644116 - 644135 + r 74 -7.8 -3.79043 | opp_overlap 644116 AAGGTATAATAAAAA CGCGCAAC TAAT GTTACGCG TTTGAATTAATCATA SAV0566 645034 - 644156 - | putative GTP cyclohydrolase SAV0567 645712 - 645047 - | hypothetical protein SAV0568 646085 - 645726 - | hypothetical protein TERM 610 646416 - 646394 - g 77 -4.8 -5.1101 | opp_overlap 646394, overlap 646397 TTAGGATCGAAAAAA CAAGCATCAT TCT ATGTTGCATG TGAGTTATATAAAGA TERM 611 646561 - 646525 - g 82 -5.3 -5.33405 | opp_overlap 646529, overlap 646528 646529 646534 GTTATTAAATAAAAA TCAGTTAAACGTAGACA ATG TATCCACGTTTAATTTA GACGAATATGTAGGT TERM 612 646557 - 646529 - g 78 -10.5 -2.65994 | opp_overlap 646529, overlap 646528 646525 646534 TTAAATAAAAATCAG TTAAACGTAGACA ATG TATCCACGTTTAA TTTAGACGAATATGT nagB 646364 - 647122 + | glucosamine-6-phosphate isomerase SAV0570 647199 - 647831 + | putative hexulose-6-phosphate synthase SAV0571 647833 - 648381 + | hypothetical protein TERM 613 648390 - 648430 + F 85 -2.8 -5.96894 | gap 1, opp_overlap 648393 AGAATAAAATAAAGA TAGTCGATAATA-TGATGC CTAG GCAGAAATATTATCGATTA TTTTTTTATTTAAAT TERM 614 648570 - 648551 - g 70 -2.1 -5.24989 | GCAGACACGAAAAAA TGTGGTG AAGTAG CAACACA AAGTGCATTTAAAGC SAV0572 648494 - 649141 + | hypothetical protein TERM 615 649376 - 649418 + F 100 -12.3 -4.95876 | opp_overlap 649376 ATATGATGAGGAAAG TAGTGATAGCATATGACTT ACATG AAGTTGTGTGCTATCGCTA TTTTTAGTTATAATT TERM 616 649712 - 649698 - g 85 -4.2 -5.59564 | overlap 649700 AGAAAGCTAAAAAAA CCGTTG TTG CAACCG GTATCGGTAATGCAA proP 649643 - 651043 + | proline/betaine transporter-like protein TERM 617 651118 - 651080 - f 100 -17 -3.52459 | opp_overlap 651080, overlap 651070 ATCAATCGTATATAA GCACTTTAAAGCTAGTAG GTT CTGCTAACTTTAAAGTGC TTTTTAAATTGAGAA TERM 618 651080 - 651118 + F 100 -17 -4.74103 | opp_overlap 651080 651070 ATCAATCGTATATAA GCACTTTAAAGCTAGTAG GTT CTGCTAACTTTAAAGTGC TTTTTAAATTGAGAA TERM 619 651202 - 651173 - f 100 -15.1 -4.17296 | TTGTATATACATAAA CCCCCACTGCAAT GATT ATCGCAATGGGGG AAAGAGGGGACTTAA TERM 620 651384 - 651403 + G 78 -7.2 -4.42325 | GACTTATTTGTGTCA GTTATTGC GATT GCGATAAC TTCTTTTCTCTATAT SAV0574 651378 - 651587 + | hypothetical protein TERM 621 652116 - 652087 - g 88 -7.9 -4.86862 | GTTAAAAAATGAAAA TGCAATAGCAGCC CCTG GACCACTATCGCA CTCGTTAACATTATA TERM 622 652182 - 652198 + G 72 -8.1 -3.41134 | opp_overlap 652179 652182 TTATAGGACAGACCA CTTTTCA TCC TGAAAAG TTACTTAATCAATGT TERM 623 652389 - 652363 - g 78 -2.4 -5.69068 | opp_overlap 652363 TAAAAAGATAAAAAA TCAAGCAAAT GACATAA ATTTGATTGA ATTTTTTGGTACATC vraA 651587 - 652963 + | hypothetical protein vraB 652965 - 654104 + | acetyl-CoA c-acetyltransferase TERM 624 654271 - 654253 - gf 74 -9 -3.24735 | TATGCAAATAGCGAA CTGATTTT AAC AAAATCAG CAATTAATCAAACTC vraC 654079 - 654444 + | hypothetical protein SAV0578 654447 - 654716 + | hypothetical protein TERM 625 654713 - 654694 - T 82 -4.4 -5.52079 | AGATTAAAATAAAAA TTTCTTTG AGCA CAAAAAAA TAACCGATATTAGCT SAV0579 655084 - 654917 - | hypothetical protein TERM 626 655507 - 655558 + r 76 -9.6 -2.84467 | opp_overlap 655508, overlap 655504 GATGATTATAAAAAA ATAACCACATCACATAAATTGAGT TCAT ACCCAATTTAAGTGGTGTGGCTAA TAATGTTGATTTATA TERM 627 655557 - 655508 - R 100 -15.3 -5.67967 | opp_overlap 655507 655504 ATGATTATAAAAAAA TAACCACATCACATAAATTGAGT TCAT ACCCAATTTAAGTGGTGTGGCTA ATAATGTTGATTTAT SAV0580 656421 - 655591 - | phosphomethylpyrimidine kinase ung 656605 - 657261 + | uracil-DNA glycosylase TERM 628 657369 - 657349 - g 76 -6.3 -4.60487 | opp_overlap 657351, overlap 657351 CACGACTTTGAAAAA CATATGTAT GCC ATACATATA TTAACATCTTTATAT SAV0582 657262 - 657642 + | hypothetical protein TERM 629 658068 - 658086 + G 79 -8.9 -3.77722 | AGTTTTAGGTGCGAT TACGCCA ATTGG TGGCGTA TTGTTCATCATTGGC SAV0583 657775 - 658143 + | hypothetical protein TERM 630 658222 - 658210 - f 82 -6.3 -5.23396 | opp_overlap 658210 658209 658214 658220 AATAATCAAGAAAAA GAGTT ACA AACTC ATCTTTTGGGTATAG TERM 631 658220 - 658254 + F 82 -5 -5.38054 | opp_overlap 658210, overlap 658210 658209 658214 AAAAAGAGTTACAAA CTCATCTTTTGGGTAT AGA ATACCTTCGAGGTGAG TTTTTATTTATGGAA TERM 632 659121 - 659139 + G 76 -7.5 -4.08221 | overlap 659117 GTTGTGGTTAACAGG TGCTGTT ACACA AACAGCA TTTGGTTATATTGGA SAV0584 658264 - 659748 + | cationic amino acid transporter TERM 633 659800 - 659754 - T 76 -5.2 -5.03961 | opp_overlap 659757, overlap 659757 AACTAAATAATAAAA GAATCGCACAATATACCTTC TTCATTC GGAGGCGTATCGTGCGATTT TTTGTATTATAAATT TERM 634 659797 - 659757 - T 78 -6.9 -4.57912 | opp_overlap 659757, overlap 659754 TAAATAATAAAAGAA TCGCACAATATACCTTC TTCATTC GGAGGCGTATCGTGCGA TTTTTTGTATTATAA TERM 635 659757 - 659797 + T 90 -6.9 -5.5208 | opp_overlap 659754 659757 TAAATAATAAAAGAA TCGCACAATATACCTTC TTCATTC GGAGGCGTATCGTGCGA TTTTTTGTATTATAA SAV0585 660341 - 659889 - | hypothetical protein SAV0586 661004 - 660354 - | hypothetical protein TERM 636 661468 - 661494 + r 100 -16.8 -4.49316 | opp_overlap 661463 AGGAAGACTACTCGG GTACACTTTGCT ATG AGCAAAGTGTAC TTTGTTATTGATAAT TERM 637 661634 - 661607 - R 100 -11.5 -5.08367 | opp_overlap 661607 AAGATAAACGAAAAA TTCCAAGCTTA AACCGA TAAGCTTGGAA TTTTTTTATTAATTT TERM 638 661607 - 661634 + r 100 -11.5 -5.9003 | opp_overlap 661607 AAGATAAACGAAAAA TTCCAAGCTTA AACCGA TAAGCTTGGAA TTTTTTTATTAATTT SAV0587 662419 - 661667 - | putative heme peroxidase TERM 639 662270 - 662282 + g 74 -6.3 -4.3898 | AGATTTTGATGATCT TACAG TTG CTGTA TTTTCTAAAAATGAT TERM 640 663362 - 663352 - g 70 -2.4 -5.24129 | opp_overlap 663352 GTTGCTGAGAAAAAA GCGC CAG GTGC TAAATTACAAGGTGA eutD 662587 - 663573 + | phosphotransacetylase SAV0589 663576 - 664412 + | putative lipoate-protein ligase A TERM 641 665305 - 665321 + G 80 -6.5 -4.71426 | GGATTAGGATCGAGT GCAGCTG TCG CGGTTGC TTTTGTTCGTGCAAG TERM 642 665888 - 665878 - g 83 -6.8 -4.86033 | AAAGCTGTAGAAAAA GCTG GTG CAGC ACATACATGGATTGA mvaK1 665080 - 665919 + | mevalonate kinase mvaD 665924 - 666907 + | mevalonate diphosphate decarboxylase mvaK2 666920 - 667996 + | phosphomevalonate kinase SAV0593 668173 - 668514 + | hypothetical protein TERM 643 668556 - 668512 - T 100 -12.4 -3.96497 | gap 1, opp_overlap 668517, overlap 668517 CGAAAAGCACAACAA TAAAACCTGATGGCA-GCATC ATTC AATGCGTGCCACCAGGTTTTT ATGTTTTGTCTAGAA TERM 644 668551 - 668517 - T 100 -12.3 -4.9645 | gap 1, opp_overlap 668517, overlap 668512 AGCACAACAATAAAA CCTGATGGCA-GCATC ATTC AATGCGTGCCACCAGG TTTTTATGTTTTGTC TERM 645 668517 - 668551 + T 100 -9.4 -5.32599 | gap 1, opp_overlap 668517 668512 AGCACAACAATAAAA CCTGATGGCA-GCAT CATTCA ATGCGTGCCACCAGG TTTTTATGTTTTGTC SAV0594 670014 - 668566 - | mercuric reductase-like protein SAV0595 670315 - 669875 - | hypothetical protein TERM 646 671473 - 671463 - g 73 -4 -5.11937 | overlap 671444 671465 AAGAATTTCAAAAAA TTGT CCA ACAA GGACTTACCCAAGCG SAV0596 670940 - 672334 + | hypothetical protein SAV0597 672338 - 672970 + | hypothetical protein SAV0598 673017 - 673637 + | hypothetical protein SAV0599 673777 - 674409 + | hypothetical protein SAV0600 674857 - 675795 + | oxidoreducatse ion channel TERM 647 675892 - 675904 + F 90 -7.7 -5.1101 | opp_overlap 675891 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATCCTAG TERM 648 675991 - 675972 - f 76 -9.3 -3.20164 | CTACAGGCAATGCAA GTTGGGG TGTGGG CCCCAAC ACAGAAGCTGACGAA TERM 649 676014 - 675998 - f 72 -8 -3.68024 | GGCCCCAACACAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA SAV0601 676241 - 676777 + | hypothetical protein TERM 650 676793 - 676818 + F 83 -3.3 -5.67529 | overlap 676796 GACATACCTCATACT AAACGAAGTGA TTTT TTGCTTCGTTA TTTTTATTTTTAATT TERM 651 676796 - 676815 + F 74 -5 -4.855 | overlap 676793 ATACCTCATACTAAA CGAAGTGA TTTT TTGCTTCG TTATTTTTATTTTTA TERM 652 677146 - 677160 + G 74 -6.4 -4.44046 | GAAGGTAATGACATC GTTGGC TTT GCTAAC TTTATTTACGGTGAA SAV0602 676945 - 677421 + | hypothetical protein SAV0603 677461 - 678756 + | dGTP triphosphohydrolase TERM 653 678857 - 678840 - g 79 -4.1 -5.36965 | overlap 678844 TAATATCATAAAAAA TGACCCT CTAG ATGGTCA TAAAGGTACAAATAT SAV0604 678799 - 679305 + | hypothetical protein TERM 654 679648 - 679634 - f 71 -7.2 -3.72241 | opp_overlap 679633 679634 TATTAACTAGGGAAA CGTTAA AAG TTAACG GTTGATATCTAACTA adh1 679804 - 680814 + | alcohol dehydrogenase TERM 655 680877 - 680912 + F 100 -10.6 -5.79588 | opp_overlap 680877 ATCATTATAATCAAA CACGAGGTTTTCATGA AAGA TAGTGAAAATCTCGTG TTTTTTTGGTTTTGA SAV0606 681078 - 681506 + | hypothetical protein argS 681503 - 683164 + | arginyl-tRNA synthetase TERM 656 683178 - 683221 + F 100 -14.8 -4.89009 | opp_overlap 683178 683180 AAGAACATTTATATA CACTCCAACGTAGAGTTTCT CGAA AGATACTTTGTGTTGGAGTG TTTTTAATTAGGTAT TERM 657 683417 - 683386 - f 100 -19 -3.37464 | GCAGCAACTGCATAA GAGCCCCTAATTAA TTTA TTAATTAGGGGCTC TAAAAGGAGGGTGTA SAV0608 683434 - 684069 + | putative endonuclease III SAV0609 684321 - 685208 + | iron-binding protein TERM 658 685224 - 685268 + F 73 -5.9 -4.6644 | gap 1 ACCATTCTAATTATG CCCCTTATTGC-TACATGTA AAAAAA TACATGTTTGAGATAAGGGG TTTTTAAAATATATT SAV0610 685357 - 686307 + | iron(III) ABC transporter permease protein SAV0611 686362 - 687081 + | L-2-haloalkanoic acid dehalogenase TERM 659 687096 - 687086 - g 71 -5.4 -4.4767 | CTATTTACTAGAAAA GATG GAA CATC GATACATTACAGTAC SAV0612 687065 - 687865 + | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid TERM 660 688453 - 688430 - g 77 -6 -4.72846 | GGATATATTGAAAAA GGCAAAACGA CTTA TCAATTTGCC TCAGCACCAAAAGAT SAV0613 688001 - 688507 + | hypothetical protein TERM 661 688527 - 688561 + F 89 -8.8 -4.67982 | TAAATTAATCGTGCT TAACCGACAAGT TAAATCGCAAT ACTTGTCGGTTA TTTTATTACATGGCA TERM 662 688796 - 688785 - g 74 -3 -5.38047 | TACTGATATAAAAAA TTCT GAAA AGAA AGATCAAGATTATAT SAV0614 688669 - 689385 + | hypothetical protein TERM 663 689389 - 689442 + F 77 -8.7 -3.6579 | gap 1, opp_overlap 689392 689397, overlap 689397 ACAAGATTATAAATA TGATAAAACTATTCA-CTTGATTAAT TGT ATTAATTGAGATGAATAGTTTTTTTA TTGTTGGAATAACTT TERM 664 689397 - 689434 + F 100 -8.1 -5.95946 | gap 1, opp_overlap 689397 689392, overlap 689389 ATAAATATGATAAAA CTATTCA-CTTGATTAAT TGT ATTAATTGAGATGAATAG TTTTTTTATTGTTGG SAV0615 689554 - 690342 + | putative esterase/lipase TERM 665 690392 - 690425 + T 86 -6.2 -5.45726 | gap 1, opp_overlap 690392 AGGCAATGTGAAAAA GCTGATTACTATTCA TTATT TGA-TAGAAATCAGC TTTTTTTGAAATGTA TERM 666 690425 - 690392 - T 76 -6.2 -4.67234 | gap 1, opp_overlap 690392 AGGCAATGTGAAAAA GCTGATTACTATTCA TTATT TGA-TAGAAATCAGC TTTTTTTGAAATGTA TERM 667 690575 - 690540 - T 71 -2 -5.48303 | gap 1, overlap 690529 690541 AGAACCTTAAAAAAA GGAAGTTTAATAGAATG TAT CAT-CTATCATACTTCA CCAAATTGCGCTAAA sarA 690970 - 690596 - | staphylococcal accessory regulator A TERM 668 690641 - 690660 + g 83 -5 -5.57054 | GATTCGTTTATTTAC TCGACTCA ATAA TGATTCGA TTTTTTTACGTTGTT TERM 669 691072 - 691105 + r 71 -7.7 -3.38446 | GTTAGTCATAATTTT GCATTAAATAAGTTT TATT AAATATATTTAATGC TCTATTATTTAGTTA SAV0617 692847 - 691918 - | hypothetical protein TERM 670 693004 - 692970 - R 100 -10 -4.81814 | opp_overlap 692967 692971, overlap 692971 ATTATCATAACAAAA TCACCCTAGACAATCA TGA TGAAAGTCTAGGGTGT TAGTATTTATACTAA TERM 671 693003 - 692971 - R 100 -13.5 -3.48004 | opp_overlap 692967 692971, overlap 692970 TTATCATAACAAAAT CACCCTAGACAATCA TGA TGAAAGTCTAGGGTG TTAGTATTTATACTA TERM 672 692971 - 693003 + r 100 -13.5 -3.51406 | opp_overlap 692971 692970, overlap 692967 TTATCATAACAAAAT CACCCTAGACAATCA TGA TGAAAGTCTAGGGTG TTAGTATTTATACTA SAV0618 693266 - 693042 - | hypothetical protein SAV0619 693486 - 693283 - | hypothetical protein TERM 673 694099 - 694086 - g 74 -5.3 -4.72986 | CATGCTTATCAAAAA GGTAT ACCT ATACC AGTCATTCAAAAGTA SAV0620 693645 - 694205 + | hypothetical protein SAV0621 694224 - 696626 + | putative monovalent cation/H+ antiporter subunit A SAV0623 696613 - 697038 + | putative monovalent cation/H+ antiporter subunit B SAV0624 697035 - 697379 + | putative monovalent cation/H+ antiporter subunit C SAV0625 697369 - 698865 + | putative monovalent cation/H+ antiporter subunit D SAV0626 698866 - 699348 + | putative monovalent cation/H+ antiporter subunit E SAV0627 699345 - 699647 + | putative monovalent cation/H+ antiporter subunit F SAV0628 699622 - 700059 + | putative monovalent cation/H+ antiporter subunit G TERM 674 700126 - 700165 + F 82 -4.4 -5.5208 | overlap 700127 AAATTAATCATTAAA AGAGTACTTTGAAATTGG TTAG TCGATTTTAAGGTGCTCA TTTTTTGTATTATAA TERM 675 700127 - 700164 + F 76 -7.9 -3.89621 | overlap 700126 AATTAATCATTAAAA GAGTACTTTGAAATTGG TTAG TCGATTTTAAGGTGCTC ATTTTTTGTATTATA SAV0629 700399 - 702441 + | hypothetical protein TERM 676 702552 - 702582 + T 72 -4.7 -4.9041 | gap 1 GAGTTTTTATTATTA GGCGGCC-AGTCCA TTAT TGGGCTTGGTTGTC TTCTTTTTTTCTCCT tnp 703868 - 702549 - | IS1181 transposase TERM 677 703969 - 703948 - R 82 -4.4 -5.52384 | overlap 703951 TGTGTATTAAAAAAA GCAGGAAG TTTTAC CTTCCCAC CATAAAATATGAAGA TERM 678 704197 - 704162 - R 100 -9 -5.28176 | opp_overlap 704168, overlap 704164 TGCATTCACAAAAAA TAGCCACACTCATATG ACAT CGGATGAGTGTGGCTT AAGGATCTATGGGGG TERM 679 704195 - 704164 - R 100 -11.6 -4.2748 | opp_overlap 704168, overlap 704162 CATTCACAAAAAATA GCCACACTCATATG ACAT CGGATGAGTGTGGC TTAAGGATCTATGGG TERM 680 704913 - 704943 + r 100 -14.3 -3.06183 | opp_overlap 704920, overlap 704900 704920 TATGTTGATGTGTAG CCTAAAATATTGG AGATA CCAATATTTTAGG TTGCATCAACATCAA SAV0631 705917 - 704988 - | lipoprotein SAV0632 706750 - 705914 - | ABC transporter permease TERM 681 705998 - 705986 - G 78 -7.7 -4.19307 | opp_overlap 705986 705985, overlap 705982 705994 GATATAAATTACAAA CGTAC AAA GTACG ATTGTCGCACCACTA TERM 682 706078 - 706099 + g 79 -4.5 -5.2189 | CACTTATTAAACTTG CTATAATCA TCAT TGAGTATAG TTTTTTACTAATTAA SAV0633 707487 - 706744 - | ABC transporter ATP-binding protein TERM 683 708201 - 708180 - g 73 -7.5 -3.73435 | opp_overlap 708180 708199, overlap 708199 AAATGAATAAAGTAA TTATCATTA AACG TAATGATAA TGTAATTATTGTCAG SAV0634 707609 - 708253 + | iron dependent repressor SAV0635 709085 - 708333 - | hypothetical protein TERM 684 709177 - 709189 + H 71 -4.9 -4.77757 | GACTTTAGACTTACC TTAGT TAA ACTAA TTTTAATTTTTGAAA tagA 709321 - 710085 + | teichoic acid biosynthesis protein TERM 685 710106 - 710135 + T 75 -4.2 -5.25805 | opp_overlap 710101 ATGATAAAAATAAAA CCGAGGAAATCC TTAAAT GGAGATTCTCGG TTTTTTCGGTTTATT tagH 710940 - 710146 - | teichoic acids export protein ATP-binding subunit tagG 711266 - 712099 + | teichoic acid translocation permease protein TERM 686 712118 - 712148 + F 71 -6.9 -4.00347 | gap 1, opp_overlap 712118 ATTTATATGACGAAA CCCCGCTAACCATT AATA AATGGA-AGTGGGG TTCATTTTTGTTTAT tagB 712831 - 713301 + | teichoic acid biosynthesis protein B tagX 713352 - 714359 + | teichoic acid biosynthesis protein X tagD 714422 - 714820 + | glycerol-3-phosphate cytidylyltransferase TERM 687 714928 - 714880 - T 76 -7.6 -4.00842 | opp_overlap 714885, overlap 714885 ATTATAAAATAAATA TAAAACGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCGTTTTT AGTATGTTTTATTTT TERM 688 714923 - 714885 - T 85 -7.5 -4.95487 | opp_overlap 714885, overlap 714880 AAAATAAATATAAAA CGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCG TTTTTAGTATGTTTT TERM 689 714885 - 714923 + T 100 -9.7 -4.91573 | opp_overlap 714885 714880 AAAATAAATATAAAA CGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCG TTTTTAGTATGTTTT pbp4 716232 - 714937 - | penicillin binding protein 4 SAV0643 716653 - 718380 + | ATP-binding cassette transporter A SAV0644 718449 - 718529 + | hypothetical protein TERM 690 719003 - 719015 + G 80 -9.1 -3.65201 | opp_overlap 718996 718993 TAAAATGATGGATAT GGCTG TTG CAGCC TTATTCCCAATATTA SAV0645 718737 - 719966 + | pyrimidine nucleoside transporter TERM 691 720012 - 720053 + F 100 -13.9 -5.66229 | opp_overlap 720011 720005 720012 TTAACTAATAAATAT GTCCAGGCATGTCGTCTAT TGAT ATAGGTGAGATGCTTGGAC TTTTTTATTATTGAT TERM 692 720146 - 720121 - f 80 -6.2 -4.94902 | opp_overlap 720121 GAAGCATTATAAAAA CCAAGTGCAC ATGGTA ATACACTTGG CTTTTATGGGAAATG SAV0646 720713 - 721324 + | hypothetical protein TERM 693 721357 - 721401 + F 87 -3.6 -5.86976 | overlap 721358 ACATACTTAAATAGA AGTCCACGGACAAGTTTTTG AACTA TGAAGACTTATCTGTGGGCG TTTTTTATTTTATAA TERM 694 721358 - 721400 + F 75 -7.1 -4.09746 | overlap 721357 CATACTTAAATAGAA GTCCACGGACAAGTTTTTG AACTA TGAAGACTTATCTGTGGGC GTTTTTTATTTTATA fhuA 721606 - 722403 + | ferrichrome transport ATP-binding protein TERM 695 722554 - 722577 + G 77 -5.3 -4.94972 | opp_overlap 722556, overlap 722556 GTGACGCCAAAATTC AAGCCTCTA CAATTA TAGAGGCTA TTTTTAATTATAATC TERM 696 722556 - 722575 + G 78 -7.9 -4.08682 | opp_overlap 722556, overlap 722554 GACGCCAAAATTCAA GCCTCTA CAATTA TAGAGGC TATTTTTAATTATAA TERM 697 722575 - 722556 - g 75 -8.6 -3.37537 | opp_overlap 722556 722554 GACGCCAAAATTCAA GCCTCTAC AATT ATAGAGGC TATTTTTAATTATAA fhuB 722439 - 723443 + | ferrichrome transport permease TERM 698 723898 - 723880 - g 71 -3 -5.07486 | overlap 723884 CAGTTTTAATAAAAA TGAAGGTG TTA CACCTGCG AGTATGGTATTAATA TERM 699 724202 - 724224 + G 85 -10.6 -3.36188 | overlap 724187 GCAGTGATGTTATCA TCTGCTGCTG TAG CAGTAGCAGG TTCAATTTCGTTTAT fhuG 723440 - 724456 + | ferrichrome transport permease TERM 700 724477 - 724515 + F 100 -10.6 -5.68438 | gap 1, opp_overlap 724476 AAGGACACAACTTAT TGCTATGAAAGGCACTT TATTAT AAG-GCTTTTCATAGCA TTTTTTATTTAATGA SAV0650 724693 - 725658 + | dihydroxyacetone kinase SAV0651 725700 - 726284 + | hypothetical protein SAV0652 726277 - 726639 + | hypothetical protein SAV0653 726755 - 727252 + | hypothetical protein TERM 701 727300 - 727321 + F 100 -8.7 -5.2189 | TTTAACATTTGGTTG GGTTGGGAC ATAT GTTCCAGCC TTTTTTAATACTTAA TERM 702 728427 - 728413 - g 73 -8.6 -3.19642 | ACTAGCATTGATCAA CTTTGC ATT GCAAAG TGAATATCCAACTAT SAV0654 727796 - 728776 + | hypothetical protein TERM 703 728835 - 728867 + F 73 -3.5 -5.28414 | gap 1, opp_overlap 728835, overlap 728829 GTTTTAACCTTAAAA GCAATTCGTCTCTA CTCTTA TCG-GGCGAATTGC TTTTTATATTTATTC TERM 704 729670 - 729648 - g 73 -7 -3.94276 | AAAATATTTCACAAA TGTCGACAGT AAA ACAATCGACA AAAAATTATCCACCA SAV0655 728927 - 729970 + | lipase LipA SAV0656 730299 - 730727 + | hypothetical protein TERM 705 730793 - 730738 - T 87 -10.9 -3.24158 | gap 1, opp_overlap 730738 730742, overlap 730742 ACTAAACAACATATA TAAAGCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGCTTTA TTTTGAATTTAAATT TERM 706 730738 - 730793 + T 100 -13.1 -4.37198 | gap 1, opp_overlap 730738 730742, overlap 730742 ACTAAACAACATATA TAAAGCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGCTTTA TTTTGAATTTAAATT TERM 707 730789 - 730742 - T 77 -7.3 -4.23853 | gap 1, opp_overlap 730738 730742, overlap 730738 AACAACATATATAAA GCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGC TTTATTTTGAATTTA TERM 708 730742 - 730789 + T 100 -9.5 -4.74598 | gap 1, opp_overlap 730742 730738, overlap 730738 AACAACATATATAAA GCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGC TTTATTTTGAATTTA SAV0657 731442 - 730936 - | hypothetical protein SAV0658 731555 - 732478 + | hypothetical protein SAV0659 732494 - 733168 + | two-component response regulator TERM 709 734169 - 734208 + G 100 -9.4 -4.78572 | opp_overlap 734173 AATGAAATTGTTGAA CGCATGTCGGAAGTGACA AATT TGTCATTTTAAACATGCG TTTTGTTACTTAGAA SAV0660 733161 - 734201 + | putative two-component sensor histidine kinase TERM 710 734571 - 734555 - g 83 -2.3 -5.79588 | overlap 734558 TTAAAAGGAAAAAAA TTAGAAA AGC TTTCAAA CAAGGAATTATCTGA vraF 734345 - 735106 + | ABC transporter ATP-binding protein TERM 711 736102 - 736089 - g 79 -5.3 -5.20606 | AAAGACCAACAAAAA GCTAA TCAA TTAGC AAGTGAATTAAACAA vraG 735084 - 736985 + | ABC transporter permease TERM 712 736998 - 737044 + F 86 -7.5 -5.20333 | gap 1 TAAAATATACAGATG GCTTTCAGTAGAG-TAGTGGAT TCGA ATTCACGAACTATACTGGAAGC TTTTTATTATAAATG TERM 713 737551 - 737535 - f 73 -8.1 -3.43081 | overlap 737533 ATATAAGGGCAAATA CAGTAAA TTG TTTACTG TGAGGCATTTTTGAA SAV0663 737708 - 738325 + | hypothetical protein TERM 714 738594 - 738614 + G 93 -10.5 -3.98804 | GATTAGTTGTTGTGT TAGCTGCAA TAC TTGCGGCTA TTATTTGGAATTTAG SAV0664 738341 - 739348 + | low-affinity inorganic phosphate transporter TERM 715 739367 - 739407 + T 100 -11.4 -5.72616 | opp_overlap 739366 739367 AAAATAAAACTAAAC TGAACTTCAGTATCACAA ACATA TGGTGGTATTGAAGTTCA TTTTTTTATGTAAGT TERM 716 739870 - 739856 - T 70 -5.8 -4.25104 | overlap 739862 TTTTTTGTACCAAAA TGAAAA TTT TTTTCA AAAATAAAAAACTAG TERM 717 739911 - 739882 - T 100 -11.7 -5.93252 | gap 1, opp_overlap 739882 739890 TTCAAAAATAAAAAA CTAGCAATCTCACA TGA TGTGA-ATTGCTAG TATATATCAGTACAA TERM 718 739882 - 739911 + T 90 -11.7 -3.0094 | gap 1, opp_overlap 739882, overlap 739890 TTCAAAAATAAAAAA CTAGCAATCTCACA TGA TGTGA-ATTGCTAG TATATATCAGTACAA SAV0665 740733 - 739936 - | secretory antigen SsaA-like protein SAV0666 741094 - 741738 + | hypothetical protein SAV0667 742435 - 744585 + | AraC/XylS family transcriptional regulator SAV0668 744665 - 745090 + | hypothetical protein TERM 719 745100 - 745133 + F 70 -3.9 -5.04601 | gap 1, opp_overlap 745101, overlap 745101 ATTTAATTGAAATTG AGTGTCGA-AAGCATA GAA TTTGCTTATCGGCACA TTTTTAATTTATACA SAV0669 745280 - 745996 + | hypothetical protein SAV0670 746281 - 746469 + | hypothetical protein TERM 720 746480 - 746522 + F 100 -9.4 -5.09685 | AATAAAAATGATCAA TGAAGTGGTTTGAAGGTT GTTAATA AACCTTTGAGTCACTTCA TTTTTATATGTATTC SAV0671 746822 - 747466 + | hypothetical protein TERM 721 747759 - 747741 - f 83 -2.4 -5.89921 | ATCAGAACAAAAAAA CAATTGAT TAC AACAACTG AAGGAACAATGATTA TERM 722 748055 - 748069 + G 84 -5.8 -5.26119 | TAACACACATTTATT TAATGA TGA TCATTA TTTTATTTTTCCAAA SAV0672 747768 - 748448 + | LysR family transcriptional regulator TERM 723 748565 - 748535 - f 82 -7.7 -4.44797 | gap 1 GCACCAACAGCAAAA GAGCCCCTAATTAA TAAA TTAAA-AGGGGCTC TAAGAAGCGGGGTTA TERM 724 749022 - 749041 + G 80 -5 -5.33405 | CCAACACAGTATTAC GTTCAATG TTCT CATTGGGC TTTTTATTTGGTCCA SAV0673 748586 - 749800 + | sugar efflux transporter TERM 725 750222 - 750255 + G 75 -6.9 -4.09519 | opp_overlap 750230, overlap 750227 AACAAGTAGTATAGC TCAAGCAATCATTAT GTTT ATAATGATTGTATGG TTCTTTATAGATGCT TERM 726 750227 - 750250 + G 77 -9.8 -3.08696 | opp_overlap 750230, overlap 750222 GTAGTATAGCTCAAG CAATCATTAT GTTT ATAATGATTG TATGGTTCTTTATAG SAV0674 749797 - 750285 + | hypothetical protein SAV0675 751073 - 750384 - | hypothetical protein TERM 727 750559 - 750543 - G 71 -3 -5.09685 | overlap 750535 750545 GAATACATAGAAAAA TCCTAC AATTA GTAGAA TGATTGCTAAATAGG SAV0676 751200 - 751643 + | hypothetical protein SAV0677 751710 - 752105 + | hypothetical protein SAV0678 752243 - 752542 + | hypothetical protein TERM 728 752557 - 752586 + F 78 -4.4 -5.4505 | overlap 752569 AACTGCTATCTAAAA CGCAAAGTTGAT CAAAAT ATCGATTTTGTG TTTTTTATTGAGAAA SAV0679 752622 - 753164 + | hypothetical protein TERM 729 753183 - 753240 + T 100 -11.8 -5.09426 | opp_overlap 753190, overlap 753186 ATTTATACATAATCG T-AACAAACACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTGTTTGTTTA TTTTTTAACCTTAGA TERM 730 753186 - 753236 + T 100 -15.1 -5.05153 | gap 1, opp_overlap 753190, overlap 753183 TATACATAATCGTAA CAAACACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTGTTTG TTTATTTTTTAACCT TERM 731 753232 - 753190 - T 100 -12.3 -4.21989 | gap 1, opp_overlap 753186 753183 CATAATCGTAACAAA CACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTG TTTGTTTATTTTTTA SAV0680 753826 - 753260 - | lysine decarboxylase family protein TERM 732 753436 - 753416 - G 83 -6.9 -4.66609 | opp_overlap 753401 TAGTGGATTGAAAAA GCCATTAAT ATT ATAAATGGC AATAGGCTTTTCATG SAV0681 754286 - 753828 - | hypothetical protein TERM 733 754260 - 754211 - G 100 -11.7 -4.8543 | gap 1 TAATTGTCACAAAAA TGCCTGTCTCAGTTGTTAAATCTA TAA TAGAATCAACAACAG-GACAAGCA TCTCCATCAATAATA SAV0682 754972 - 754289 - | hypothetical protein TERM 734 755124 - 755095 - R 90 -8 -5.31072 | opp_overlap 755095 AGAAGACAATAAAAA CTGCCAATCAAG TGGTTC CTTAATTGACAG TCTATATTTTAAAAG uppP 756019 - 755144 - | undecaprenyl pyrophosphate phosphatase SAV0684 756238 - 757869 + | hypothetical protein SAV0685 757866 - 759539 + | ABC transporter TERM 735 759576 - 759545 - T 100 -12.4 -5.66684 | opp_overlap 759545 TAATGCATAAAAAAA CTGCTTGATAGGCT AAGA AACCTTTCAAGCAG TTTTTTAACTAACAA TERM 736 759545 - 759576 + T 100 -10.2 -5.08824 | opp_overlap 759545 TAATGCATAAAAAAA CTGCTTGATAGGCT AAGA AACCTTTCAAGCAG TTTTTTAACTAACAA SAV0686 760109 - 759666 - | transcriptional regulator TERM 737 761024 - 761040 + G 74 -5.9 -4.52803 | ACACGTTTACAGGTC CGATTGA TCG TCAATTG TTTTATCAATTTATA SAV0687 760336 - 761262 + | cobalamin synthesis related protein SAV0688 761365 - 762273 + | oxidoreductase SAV0689 762308 - 762595 + | hypothetical protein TERM 738 762626 - 762606 - f 77 -5.5 -4.93696 | opp_overlap 762606, overlap 762586 TTTAAATATTAAAAA GAGACTATC TAC AATAATCTC ATTTGCATTTTATCT TERM 739 762908 - 762893 - g 71 -3.3 -5.19328 | ATGTCAGAAGAAAAA CATGT AGTGGA ACATG AACAACAAAAGAAAG TERM 740 763264 - 763291 + G 78 -7 -4.4521 | overlap 763266 TAGTGGATATGCAAC TTCAGCTGTAGC TCTC GTTGCAGCTGCA TTATTTTTGGCTGCT TERM 741 763266 - 763289 + G 75 -9.6 -2.54902 | overlap 763264 GTGGATATGCAACTT CAGCTGTAGC TCTC GTTGCAGCTG CATTATTTTTGGCTG SAV0690 762878 - 764431 + | TetR family transcriptional regulator SAV0691 764517 - 765890 + | putative deoxyribodipyrimidine photolyase TERM 742 766000 - 765961 - T 81 -8.1 -4.2772 | opp_overlap 765964, overlap 765964 CTTAAGCAATATAAA TAAGCCAATTTCTATTA TTGATG TGATAGAAATTGGCTTT CCTCAAATATATAAG TERM 743 765964 - 765997 + T 100 -12.7 -3.75933 | opp_overlap 765961 765964 AAGCAATATAAATAA GCCAATTTCTATTAT TGAT GTGATAGAAATTGGC TTTCCTCAAATATAT TERM 744 765997 - 765964 - T 91 -9.8 -4.24283 | opp_overlap 765964, overlap 765961 AAGCAATATAAATAA GCCAATTTCTATTA TTGATG TGATAGAAATTGGC TTTCCTCAAATATAT SAV0692 766329 - 766045 - | hypothetical protein SAV0693 766946 - 766326 - | hypothetical protein SAV0694 767551 - 767129 - | hypothetical protein norA 767760 - 768926 + | quinolone resistance protein TERM 745 768930 - 768920 - f 70 -4 -5.011 | ATTGAAAGAACAAAA TATG TAG CATA AGTATTTTGGTGTAT TERM 746 769406 - 769388 - g 74 -3.2 -5.35224 | opp_overlap 769392, overlap 769383 CTTATAAAAAGAAAA TGGATATT CTC AATATTCA TACTGCTAAAGCATC SAV0696 769219 - 769671 + | hypothetical protein TERM 747 769681 - 769705 + F 85 -5.8 -5.46706 | AAATAATAGATGGAA CAGTGTATTC TAATT GGATATACTG TTTTTATTTTGCAAT SAV0697 769845 - 770327 + | transcription regulation protein TERM 748 770412 - 770357 - f 100 -16.4 -3.03619 | opp_overlap 770360, overlap 770360 770380 AAGTATGGGGCAAGA TTAGGAGTGTGGCAGAGATGAAATTT TTAT AAAATTCATTTCTGCCACACTCCTTT TTGATTGAATTAGCA TERM 749 770409 - 770360 - f 100 -22.5 -2.74192 | opp_overlap 770360, overlap 770357 770380 TATGGGGCAAGATTA GGAGTGTGGCAGAGATGAAATTT TTAT AAAATTCATTTCTGCCACACTCC TTTTTGATTGAATTA TERM 750 770360 - 770409 + F 100 -24.7 -4.90013 | opp_overlap 770360 770357 770380 TATGGGGCAAGATTA GGAGTGTGGCAGAGATGAAATTT TTAT AAAATTCATTTCTGCCACACTCC TTTTTGATTGAATTA SAV0698 770580 - 771341 + | transcription repressor of fructose operon TERM 751 771370 - 771380 + G 71 -5.4 -4.60889 | overlap 771378 TTTCAATCCTTCAAT TGAC TAT GTCA TTTTTACGAATGATT fruB 771338 - 772258 + | fructose 1-phosphate kinase fruA 772264 - 774222 + | fructose specific permease TERM 752 774338 - 774379 + F 88 -5.5 -5.63236 | gap 1 ACAAAGCTGTAAAAA CACTTTC-TATTAATTCA GTTTTTA TGAATTGATATGAAGGTG TTTTTATTTTTAGAT nagA 774530 - 775711 + | N-acetylglucosamine-6-phosphate deacetylase SAV0702 775932 - 777281 + | magnesium and cobalt efflux protein corC TERM 753 777294 - 777333 + F 95 -8.1 -5.47218 | opp_overlap 777297, overlap 777297 TAGATATTAATATAT AAACCAACTAAGAATGA TTTAAT TCATTTTTGGTTGGTTA TTTTTTTGACTAAAA TERM 754 777297 - 777330 + F 100 -9.8 -4.8236 | opp_overlap 777297, overlap 777294 ATATTAATATATAAA CCAACTAAGAATGA TTTAAT TCATTTTTGGTTGG TTATTTTTTTGACTA SAV0703 777503 - 778342 + | oxidoreductase SAV0704 778474 - 779457 + | CsbB stress response protein TERM 755 779459 - 779443 - T 71 -6.7 -3.96188 | AAGGATACCCATAAA GTTTATT CTA AATAAAC AAAAAAAGAAGCCCT TERM 756 779490 - 779467 - T 95 -7.4 -6.11392 | opp_overlap 779467 AAATAAACAAAAAAA GAAGCCCTCA TTAA TGGGAGCTTC TTTTTAGTCTTTGCA TERM 757 779467 - 779490 + T 85 -7.4 -4.93696 | opp_overlap 779467 AAATAAACAAAAAAA GAAGCCCTCA TTAA TGGGAGCTTC TTTTTAGTCTTTGCA saeS 780584 - 779529 - | histidine protein kinase saeR 781270 - 780584 - | response regulator SAV0707 781427 - 781245 - | hypothetical protein SAV0708 782501 - 782061 - | hypothetical protein TERM 758 782339 - 782351 + g 76 -4.1 -5.19275 | TTTTAGAACTGAATG TACCT GTT AGGTG TTTTGTTTTATCAGT TERM 759 782774 - 782719 - R 100 -16.7 -3.60214 | opp_overlap 782721 782729, overlap 782721 782729 ATCTGAACTAGATAA CACTATAAAACACTTCTGATATTTT GAACTA AGAATATCAGAAGTGTTTTATAGTT TTGGTATTAAAATTT TERM 760 782772 - 782721 - R 100 -19.3 -3.376 | opp_overlap 782721 782729, overlap 782719 782729 CTGAACTAGATAACA CTATAAAACACTTCTGATATTTT GAACTA AGAATATCAGAAGTGTTTTATAG TTTTGGTATTAAAAT TERM 761 782721 - 782772 + r 100 -21.5 -4.43012 | opp_overlap 782721 782719 782729, overlap 782729 CTGAACTAGATAACA CTATAAAACACTTCTGATATTTT GAACTA AGAATATCAGAAGTGTTTTATAG TTTTGGTATTAAAAT TERM 762 782729 - 782764 + r 100 -12.9 -4.68539 | opp_overlap 782721 782719 782729, overlap 782721 GATAACACTATAAAA CACTTCTGATATTTT GAACTA AGAATATCAGAAGTG TTTTATAGTTTTGGT TERM 763 782764 - 782729 - R 100 -10.7 -4.56629 | opp_overlap 782729 782721, overlap 782721 782719 GATAACACTATAAAA CACTTCTGATATTTT GAACTA AGAATATCAGAAGTG TTTTATAGTTTTGGT SAV0709 783365 - 782781 - | hypothetical protein SAV0710 784177 - 783464 - | coenzyme PQQ synthesis-like protein SAV0711 784600 - 784181 - | 6-pyruvoyl tetrahydrobiopterin synthase-like protein SAV0712 785270 - 784602 - | aluminum resistance protein TERM 764 785378 - 785356 - H 93 -5.6 -6.14618 | TATAAAATAAAAAAA GCCTATCTCC ATA AAAGATAGAC GAAAGAAATGGGTTG SAV0713 785621 - 786214 + | para-aminobenzoate synthase component II SAV0714 786198 - 787349 + | putative para-aminobenzoate synthase component I SAV0715 787349 - 787957 + | putative para-aminobenzoate synthase component I SAV0716 788023 - 788229 + | hypothetical protein SAV0717 788317 - 789027 + | hypothetical protein SAV0718 789011 - 790015 + | hypothetical protein SAV0719 790489 - 792429 + | anion-binding protein TERM 765 792444 - 792470 + F 100 -14.6 -4.94147 | opp_overlap 792440 792438 792444 ATATTTAAACACGAA CTCGGATTGATA AAA TATCAATCCGGG TTTTATTATGTTCTT TERM 766 792470 - 792444 - f 100 -12.4 -3.47431 | opp_overlap 792444, overlap 792440 792438 ATATTTAAACACGAA CTCGGATTGATA AAA TATCAATCCGGG TTTTATTATGTTCTT SAV0720 792705 - 794582 + | ABC transporter ATP-binding protein TERM 767 796071 - 796061 - g 76 -4 -5.27477 | ACTTCAATTAAAAAA TTAC TCA GTAA TGAAGTAGAAGTATT recQ 794594 - 796375 + | DNA helicase TERM 768 796382 - 796413 + F 86 -5.3 -5.53288 | gap 1 AAAGTATAGTGAAGG CACCTAGT-AAGCA TTCCT TGTTTTACTGGGTG TTTTTTTGAATTCAA TERM 769 796996 - 796986 - g 74 -3.2 -5.36364 | overlap 796993 TGAAAAATATAAAAA CAGA AAA CCTG ATGAATTGTCAGGGG TERM 770 797009 - 796993 - g 73 -3.7 -5.02287 | overlap 796986 TATAAAAACAGAAAA CCTGA TGAATTG TCAGG GGGGCAACGACAACG SAV0722 796597 - 797574 + | choline transport ATP-binding protein TERM 771 798989 - 798975 - g 72 -2.9 -5.22137 | AACTAGAAAACAAAA TATCT GATGA AGATA TGCAAATGATGAACT SAV0723 797567 - 799081 + | choline transporter TERM 772 799086 - 799134 + F 84 -9.1 -3.85256 | opp_overlap 799085 799089, overlap 799089 TAATCAAATAACGAC CAACGCCACATAAGATGCG TAACACCAAAT TATATCTTATGTGGCGTTG TTATATTTAAATCTA SAV0724 799321 - 800379 + | histidinol-phosphate aminotransferase TERM 773 800521 - 800509 - f 90 -7.7 -5.1925 | opp_overlap 800508 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SAV0725 800718 - 801260 + | hypothetical protein TERM 774 801416 - 801397 - T 76 -9.4 -3.09273 | opp_overlap 801401, overlap 801401 GGGCCCCAACATAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG TERM 775 801448 - 801431 - T 93 -11.3 -3.27907 | overlap 801426 CTACAGACAATGCAA GTTGGGG TGGG CCCCAAC ATAAAGAAATACTTT TERM 776 801561 - 801573 + T 90 -7.7 -5.1925 | opp_overlap 801560 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG TERM 777 801638 - 801619 - T 76 -9.4 -3.09273 | opp_overlap 801623, overlap 801623 GGGCCCCAACACAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG TERM 778 801876 - 801834 - T 74 -7.3 -3.99324 | gap 2, opp_overlap 801834 TCTCATTATTATAAA TCGGATGAATGTGTTAATCTA TGG CAGATT-ACACGT-CATCCGA TTTTTTATAGAATTT TERM 779 801834 - 801876 + T 100 -8.8 -5.28826 | gap 2, opp_overlap 801834 TCTCATTATTATAAA TCGGATGAATGTGTTAATCT ATGGC AGATTA-CACGT-CATCCGA TTTTTTATAGAATTT SAV0726 803000 - 802083 - | multidrug resistance protein TERM 780 803246 - 803221 - R 100 -11.3 -5.68039 | opp_overlap 803221 AAACCTATAAAAAAA CAGTAAGCCAT TTAA ATGACTTACTG TTTTTTGAATTAGGC TERM 781 803221 - 803246 + r 100 -9.1 -5.15969 | opp_overlap 803221 AAACCTATAAAAAAA CAGTAAGCCAT TTAA ATGACTTACTG TTTTTTGAATTAGGC SAV0727 804775 - 803270 - | di-tripeptide ABC transporter TERM 782 804885 - 804875 - R 85 -2.6 -5.89659 | opp_overlap 804875 ACAAAAAAATAAAAA TATT GAG AATA TTCTGTTATTAAGCG TERM 783 805062 - 805098 + r 100 -12.6 -4.21974 | gap 1, opp_overlap 805062 ATGCTAAATGAAAAA CACACCAATAAGTTAGG AAAA TC-AACTTATTGGTGTG TTTATTAAATGATAC TERM 784 805098 - 805062 - R 100 -13.3 -4.99134 | opp_overlap 805062 ATGCTAAATGAAAAA CACACCAATAAGTTA GGAAAAT CAACTTATTGGTGTG TTTATTAAATGATAC SAV0728 805616 - 805116 - | 7-cyano-7-deazaguanine reductase SAV0729 806502 - 805636 - | putative transporter TERM 785 806941 - 806954 + H 70 -5.3 -4.53303 | opp_overlap 806941 806939 GTGAAACGAAAAAGA CACAA TATC TTGTG TTTTGTATGCAAATG TERM 786 807133 - 807190 + H 100 -13.3 -2.6953 | gap 1, opp_overlap 807132 807133, overlap 807133 TTCAACCCATATAAG CTACT-ATTTTCTCAAATATAAATCTAT GCA ATTGGTTTACATTTGAGAAAATAAGTAG CTTCATTATAGTTAA TERM 787 807190 - 807133 - H 100 -13.3 -2.72739 | gap 1, opp_overlap 807133 807133, overlap 807132 TTCAACCCATATAAG CTACT-ATTTTCTCAAATATAAATCTAT GCA ATTGGTTTACATTTGAGAAAATAAGTAG CTTCATTATAGTTAA nrdI 807303 - 807701 + | ribonucleotide reductase stimulatory protein nrdE 807613 - 809769 + | ribonucleotide-diphosphate reductase subunit alpha TERM 788 809833 - 809794 - f 77 -7.4 -4.208 | gap 1, opp_overlap 809788, overlap 809788 809797 GTTGAAAATGACAAA CAG-CTAATCATCTGGT CTGAATT AGCAGATGATTAGACTG CTATGTCTGTATTTG nrdF 809887 - 810858 + | ribonucleotide-diphosphate reductase subunit beta SAV0733 811233 - 812204 + | ferrichrome ABC transporter permease SAV0734 812191 - 813147 + | ferrichrome ABC transporter permease SAV0735 813144 - 813905 + | ferrichrome ABC transporter ATP-binding protein TERM 789 814990 - 814953 - g 73 -8.1 -3.63901 | gap 1, opp_overlap 814957, overlap 814951 814957 814965 AGCAATTAAAGAAGA CAAAGTA-TATAATTTAG ATC CTAAATTATGGTACTTTG CAGCTGGATCAACTA SAV0736 814024 - 815052 + | lipoprotein TERM 790 815056 - 815106 + T 100 -16.5 -3.53091 | opp_overlap 815061, overlap 815061 GTTGTAAAATAATTT TAAAAGAGGGGAACAATGGTTAA AGGTC TTAATCATTGCTCCCCTCTTTTC TTTAAAAAAGGAAAT TERM 791 815061 - 815101 + T 100 -16.4 -4.86731 | opp_overlap 815061, overlap 815056 AAAATAATTTTAAAA GAGGGGAACAATGGTTAA AGGTC TTAATCATTGCTCCCCTC TTTTCTTTAAAAAAG TERM 792 815101 - 815061 - T 100 -17.1 -4.26634 | opp_overlap 815061 815056 AAAATAATTTTAAAA GAGGGGAACAATGGTTAAA GGT CTTAATCATTGCTCCCCTC TTTTCTTTAAAAAAG SAV0737 815683 - 815369 - | hypothetical protein SAV0738 816624 - 815701 - | UDP-N-acetylenolpyruvoylglucosamine reductase SAV0739 817269 - 816751 - | hypothetical protein TERM 793 817408 - 817422 + G 84 -6.4 -5.02323 | AAAAAATTGTTATTA TCGCTG TTT TAGCGA TTTTATTTGTAGTAA SAV0740 817389 - 818267 + | hypothetical protein TERM 794 818280 - 818300 + F 70 -6.3 -4.0616 | opp_overlap 818259 TAACTATAATCATTT TTCAAAGTT AAA AATTTTGAA TTTATGGTTAACATG TERM 795 818499 - 818478 - g 70 -4.6 -4.7261 | ATTGAGGAAAATAAA TATGTTTT TGTATT AAAACATA GTGAAACTTGTCCAA SAV0741 818421 - 818741 + | hypothetical protein SAV0742 819165 - 820289 + | glycerate kinase TERM 796 820395 - 820426 + T 100 -10.3 -5.87996 | opp_overlap 820395 AAAAAATATGAAAAA TCACGCTATCATT GCACTG AATGTTAGCGTGA TTTTTTTATTAATTA TERM 797 820426 - 820395 - T 100 -10.3 -5.04265 | opp_overlap 820395 AAAAAATATGAAAAA TCACGCTATCATT GCACTG AATGTTAGCGTGA TTTTTTTATTAATTA pepT 821702 - 820476 - | peptidase T TERM 798 820807 - 820823 + g 81 -8.1 -4.1673 | opp_overlap 820820 GCATTGATATCGTCA CGTATTT CTA AAATACG TTTCTTACGCAATTC TERM 799 820833 - 820844 + g 74 -3 -5.32882 | opp_overlap 820820 AATACGTTTCTTACG CAAT TCGA ATTG TTTTTTATCATGATC SAV0744 822210 - 821716 - | hypothetical protein SAV0745 822989 - 822228 - | hypothetical protein TERM 800 823122 - 823173 + r 100 -10 -4.6265 | gap 1, opp_overlap 823122 TTTAAATAAGAAAAA CTGTTAATC-TTTGCTATTAT ACTATGATTTA ATAATAGCAAAGGATTAACAG TTTTGTCGTTGTTAT TERM 801 823173 - 823122 - R 100 -10 -5.38549 | gap 1, opp_overlap 823122 TTTAAATAAGAAAAA CTGTTAATC-TTTGCTATTAT ACTATGATTTA ATAATAGCAAAGGATTAACAG TTTTGTCGTTGTTAT SAV0746 824255 - 823185 - | hypothetical protein TERM 802 824290 - 824309 + H 77 -8 -4.11938 | ATTGACCACTAGCTA TTGTAAGT GAAA ACTTACAA TTTGTCATTAGTTTA llm 824573 - 825628 + | lipophilic protein affecting lysis rate and methicillin resistance level SAV0748 826434 - 825793 - | hypothetical protein SAV0749 826578 - 827444 + | hypothetical protein SAV0750 827988 - 828890 + | comF operon protein 1 SAV0751 828883 - 829557 + | hypothetical protein SAV0752 829618 - 830190 + | ribosomal subunit interface protein TERM 803 830226 - 830203 - f 90 -11.1 -3.70505 | opp_overlap 830203, overlap 830224 TAAATTAAGTTTAAA GCACTTGTG TTTTTG CACAAGTGC TTTTTTATACTCCAA TERM 804 830203 - 830226 + F 100 -11.8 -5.31275 | opp_overlap 830203 830224 TAAATTAAGTTTAAA GCACTTGTGT TTTT GCACAAGTGC TTTTTTATACTCCAA TERM 805 832397 - 832371 - g 70 -3.6 -4.94902 | GAATCAGCACAAAAA CGTGTAGAAGGT AAT AACTTCGACGCG CGTAAACGTATCTTA secA 830604 - 833135 + | preprotein translocase subunit SecA TERM 806 834416 - 834400 - g 76 -4.4 -5.05606 | overlap 834402 GCGAACAAAAAGAAA TCGGCT GGGGA AGCCAA ATTAGATCATATGTT prfB 833568 - 834560 + | peptide chain release factor 2 TERM 807 834568 - 834604 + F 90 -7.3 -5.42259 | opp_overlap 834567 834575, overlap 834575 ACGATTAATATATAT TTTAAAACCGAGGCTCT AAA AGGGCGTCGGTTTTTGG TTTTTTTAAAGGTAG TERM 808 834597 - 834575 - f 77 -7.6 -4.18802 | opp_overlap 834568 834575, overlap 834567 ATATATATTTTAAAA CCGAGGCTCT AAA AGGGCGTCGG TTTTTGGTTTTTTTA TERM 809 834575 - 834597 + F 100 -9.8 -5.31158 | opp_overlap 834567 834575, overlap 834568 ATATATATTTTAAAA CCGAGGCTCT AAA AGGGCGTCGG TTTTTGGTTTTTTTA TERM 810 834980 - 835009 + G 74 -3.5 -5.22039 | opp_overlap 834980 834981, overlap 834981 CAAGATGAAAAAAAC TCTTACAGTGACG GTTT CGTCAGTGTTAGC TTTTTTAGCTTTAAA TERM 811 834981 - 835008 + G 70 -7 -3.72139 | opp_overlap 834980 834981, overlap 834980 AAGATGAAAAAAACT CTTACAGTGACG GTTT CGTCAGTGTTAG CTTTTTTAGCTTTAA TERM 812 835209 - 835219 + G 74 -6.8 -4.35327 | TATTCATACAATCCT GGTG TAA CACC TTTAATTTTTCCTGG TERM 813 835336 - 835322 - g 70 -4.2 -4.75776 | overlap 835335 AAGCCAAGCTAAAAA GGTAGT AAA ACAACC TGTACAACAAGCGTC SAV0755 834969 - 835808 + | hypothetical protein TERM 814 835865 - 835831 - f 76 -10.1 -2.86349 | opp_overlap 835831, overlap 835828 ATCAAGACAAGACTA TCCTCTTAGCCTGTT TAAGT AACAGGTTGAGAGGA TTTTTTGGTATCATT TERM 815 835831 - 835865 + F 100 -14.5 -5.2422 | opp_overlap 835831 835828 ATCAAGACAAGACTA TCCTCTTAGCCTGTT TAAGT AACAGGTTGAGAGGA TTTTTTGGTATCATT SAV0756 835982 - 836632 + | HD superfamily hydrolase SAV0757 836629 - 836865 + | hypothetical protein TERM 816 836974 - 837000 + F 100 -8.9 -5.47159 | opp_overlap 836977 836980 CGATTTGATTTAAGG CAAGCATAGTT AGCAC AACTATGTTTG TTTTTCTTTGTTCGA uvrB 837128 - 839119 + | excinuclease ABC subunit B uvrA 839127 - 841973 + | exinuclease ABC subunit A TERM 817 841976 - 842022 + F 95 -11.9 -3.58162 | opp_overlap 841976 841982, overlap 841982 TGAAGATAAATAAGA TTAAAAGAAGTGAAGGGTG TTGTAAATT TACCCTTCACTTCTTTTTA TTAATTTAGTAATGA TERM 818 842022 - 841976 - f 93 -11.2 -3.70022 | opp_overlap 841976 841982, overlap 841982 TGAAGATAAATAAGA TTAAAAGAAGTGAAGGGT GTTGTAAATTT ACCCTTCACTTCTTTTTA TTAATTTAGTAATGA TERM 819 841982 - 842016 + F 100 -10.9 -5.24551 | opp_overlap 841976 841982, overlap 841976 TAAATAAGATTAAAA GAAGTGAAGGGTG TTGTAAATT TACCCTTCACTTC TTTTTATTAATTTAG TERM 820 842016 - 841982 - f 100 -10.2 -4.52347 | opp_overlap 841982 841976, overlap 841976 TAAATAAGATTAAAA GAAGTGAAGGGT GTTGTAAATTT ACCCTTCACTTC TTTTTATTAATTTAG TERM 821 842232 - 842212 - f 100 -12.7 -3.61527 | overlap 842208 ACTTAAAAATAGGAA TGCATGAGT GCA ACTCATGCA TAAGAAATACTAATT TERM 822 842272 - 842289 + F 93 -11.3 -3.35696 | overlap 842267 AAAGTATTTCTTTAT GTTGGGG CCCA CCCCAAC TTGCATTGTTTGTAG TERM 823 842359 - 842377 + F 70 -6.1 -4.1891 | CTTGCATTGCCTGTA GAATTTC TTTTC GAAATTC TTTATGTTGGGGCCC hprK 842637 - 843569 + | HPr kinase/phosphorylase lgt 843575 - 844414 + | prolipoprotein diacylglyceryl transferase SAV0762 844422 - 844907 + | O-acetyltransferase TERM 824 845207 - 845233 + G 77 -8.8 -3.58176 | opp_overlap 845209 845214, overlap 845209 845214 ACATTGAAGTTAACG AACCAAACAAGG CAT TCTTGTTTGGTA TTAATTATGTTATTG TERM 825 845231 - 845209 - g 87 -10.7 -3.40788 | opp_overlap 845209 845207 845214, overlap 845214 ATTGAAGTTAACGAA CCAAACAAG GCATT CTTGTTTGG TATTAATTATGTTAT TERM 826 845209 - 845231 + G 89 -11.4 -3.34812 | opp_overlap 845209 845214, overlap 845207 845214 ATTGAAGTTAACGAA CCAAACAAGG CAT TCTTGTTTGG TATTAATTATGTTAT TERM 827 845337 - 845321 - g 74 -5.9 -4.49364 | opp_overlap 845322 845327 AAAGCGAAGAACAAA TTGAACT TGA AGCTCAA TTGTTTGTAGTTCAA SAV0763 844915 - 846354 + | TRP domain-containing protein trxB 846421 - 847356 + | thioredoxine reductase TERM 828 847373 - 847352 - f 78 -10.3 -2.59608 | opp_overlap 847351 847349 847352, overlap 847351 ATTTAAACGATCAAG CTTAATTCG AGGT CGAATTAAG ATGTTGAGTTGTAAG TERM 829 847352 - 847373 + F 78 -10.3 -2.50511 | opp_overlap 847352 847351, overlap 847351 847349 ATTTAAACGATCAAG CTTAATTCG AGGT CGAATTAAG ATGTTGAGTTGTAAG TERM 830 847667 - 847647 - f 81 -9.1 -3.61527 | overlap 847649 ACTTAAAAATAGGAA TACATGAGT AAA ACTCATGCA TAAGAAATACTAATT TERM 831 847665 - 847649 - f 78 -9.5 -3.37164 | overlap 847647 TTAAAAATAGGAATA CATGAGT AAA ACTCATG CATAAGAAATACTAA TERM 832 847821 - 847840 + F 78 -9.3 -3.27907 | TTCGAAATTCTCTTT GTTGGGG CCCACA CCCCAAC TTGCATTGTCTGTAG TERM 833 847855 - 847874 + F 76 -9.4 -3.09273 | opp_overlap 847859, overlap 847859 CTTGCATTGTCTGTA GAAATTGG AAAT CCAATTTC TCTGTGTTGGGGCCC TERM 834 847880 - 847899 + F 78 -9.3 -3.27907 | ATCCAATTTCTCTGT GTTGGGG CCCACA CCCCAAC TTGCATTGTCTGTAG TERM 835 847914 - 847933 + F 76 -9.4 -3.09273 | opp_overlap 847918, overlap 847918 CTTGCATTGTCTGTA GAAATTGG AAAT CCAATTTC TCTGTGTTGGGGCCC TERM 836 847997 - 848016 + F 78 -9.3 -3.27907 | TTCGAAATTCTCTGT GTTGGGG CCCACA CCCCAAC TTGCATTGTCTGTAG TERM 837 848031 - 848050 + F 76 -9.4 -3.09273 | opp_overlap 848035, overlap 848035 CTTGCATTGTCTGTA GAAATTGG AAAT CCAATTTC TCTGTGTTGGGGCCC TERM 838 848097 - 848085 - f 90 -7.7 -5.07567 | opp_overlap 848084 CTAGAGTTGAAAAAA GCTTG TTG CAAGC GCATTTTCATTCAGT TERM 839 848352 - 848374 + G 78 -7.8 -4.08689 | opp_overlap 848352 CTATTAGTTGTAACA GGTTTATCTG GAG CAGGTAAATC TTTGGTTATTCAATG TERM 840 848381 - 848407 + G 70 -3.8 -4.99035 | AGGTAAATCTTTGGT TATTCAATGTTT AGA AGACATGGGATA TTTTTGTGTAGATAA SAV0765 848301 - 849212 + | hypothetical protein SAV0766 849209 - 850204 + | hypothetical protein SAV0767 850315 - 851259 + | hypothetical protein TERM 841 851267 - 851298 + F 95 -8.2 -5.37345 | opp_overlap 851267 AATTATAAGTAAGAA GGTGTTTTTGGTAG TGAA TTATCAAAAATACC TTTTTTATGATTAAA TERM 842 851529 - 851508 - f 95 -10.2 -4.12857 | opp_overlap 851508 851511, overlap 851511 AATCAGCATAAATAA GAATCCCG ACTTTG CGGGATTC TCTGTATTGAAAAGT TERM 843 851508 - 851529 + F 81 -10.2 -3.09452 | opp_overlap 851508 851511, overlap 851511 AATCAGCATAAATAA GAATCCCG ACTTTG CGGGATTC TCTGTATTGAAAAGT TERM 844 851526 - 851511 - f 70 -6.1 -4.17309 | opp_overlap 851511 851508, overlap 851508 CAGCATAAATAAGAA TCCCG ACTTTG CGGGA TTCTCTGTATTGAAA TERM 845 851764 - 851750 - f 71 -7.2 -3.71794 | ATGTAACTATTTAAA GTCAAA GTG TTTGAC CAAATTTGACTTAAT clpP 851823 - 852410 + | ATP-dependent Clp protease proteolytic subunit-like protein TERM 846 852443 - 852422 - T 75 -7.3 -4.11275 | opp_overlap 852422 ATAATTCAAAGTAAA GAGTAGACT AAGC AGTCTGCTC TTTTTGTATGAGTAA TERM 847 852422 - 852443 + T 100 -9.5 -4.99035 | opp_overlap 852422 ATAATTCAAAGTAAA GAGTAGACT AAGC AGTCTGCTC TTTTTGTATGAGTAA TERM 848 852535 - 852578 + T 93 -11.2 -3.22499 | opp_overlap 852536 852541 852561, overlap 852531 852536 852541 TTGAACCGTAACTAT ATGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCAA TCCTTTGTTTGTAAG TERM 849 852577 - 852536 - T 100 -16.9 -2.92246 | opp_overlap 852536 852535 852531 852541, overlap 852541 852561 TGAACCGTAACTATA TGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCA ATCCTTTGTTTGTAA TERM 850 852536 - 852577 + T 100 -14.7 -2.52776 | opp_overlap 852536 852541 852561, overlap 852535 852531 852541 TGAACCGTAACTATA TGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCA ATCCTTTGTTTGTAA TERM 851 852572 - 852541 - T 95 -11 -3.889 | opp_overlap 852541 852536 852535 852531, overlap 852536 852561 CGTAACTATATGAAA TGTTCCCTTCAAAG TAGA CATTGAAAGGAACA TTTCAATCCTTTGTT TERM 852 852541 - 852572 + T 80 -8.8 -3.75898 | opp_overlap 852536 852541 852561, overlap 852536 852535 852531 CGTAACTATATGAAA TGTTCCCTTCAAAG TAGA CATTGAAAGGAACA TTTCAATCCTTTGTT SAV0769 853555 - 852653 - | hypothetical protein TERM 853 852798 - 852810 + g 73 -7.7 -3.75015 | opp_overlap 852798, overlap 852804 AGACGCATTGCAAGA CTTGG TGC CCAAG TTTCATGGGGCTTAT TERM 854 853796 - 853822 + H 100 -10.1 -5.56573 | overlap 853797 ACTCCCTTTAGTAGT GGACCCGTACG TTAAT CGTGCGGGTCG TTTTTATTTATTTCT TERM 855 853797 - 853821 + H 100 -13.6 -3.90284 | overlap 853796 CTCCCTTTAGTAGTG GACCCGTACG TTAAT CGTGCGGGTC GTTTTTATTTATTTC SAV0770 854258 - 854887 + | hypothetical protein TERM 856 855115 - 855131 + F 72 -8 -3.68024 | TCCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 857 855171 - 855187 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 858 855227 - 855243 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 859 855283 - 855299 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 860 855362 - 855380 + F 81 -10.3 -3.20164 | TCCGCCAGCTTCTGT GTTGGGG CCCCA CCCCAAC TTGCATTGCCTGTAG TERM 861 855395 - 855414 + F 76 -9.4 -3.09273 | opp_overlap 855399, overlap 855399 CTTGCATTGCCTGTA GAAATTGG AAAT CCAATTTC TCTATGTTGGGGCCC TERM 862 855623 - 855602 - f 81 -5.9 -5.27476 | GCGAATAAAATAAAA CGTTTTGTT GAAT AACAAATCG AAAATGTATTGCAAG gapR 855812 - 856825 + | glycolytic operon regulator gap 856878 - 857888 + | glyceraldehyde-3-phosphate dehydrogenase TERM 863 857957 - 857987 + F 90 -8.4 -4.98522 | gap 1, opp_overlap 857948 857960 ATTAAAGCTTATGAG TAAGCGG-GGAGC ACAAAC GCTTCTCCGCTTA TTTTTATATAAAATT pgk 858027 - 859217 + | phosphoglycerate kinase tpi 859339 - 860100 + | triosephosphate isomerase pgm 860103 - 861620 + | phosphoglyceromutase eno 861750 - 863054 + | enolase TERM 864 863166 - 863193 + F 100 -9.2 -5.79595 | opp_overlap 863166 CGCTTGTATTTATAA CCTGCCACAG AGTTGAGA CTGTGGTAGG TTTTTTATTTTGAAG SAV0777 863393 - 863851 + | hypothetical protein TERM 865 864068 - 864056 - g 82 -5.5 -5.27335 | opp_overlap 864056 TTCGGTAAACAAAAA CAACG TGG CGTCG ATTTATTCTTAAATA secG 863918 - 864151 + | preprotein translocase subunit SecG TERM 866 864153 - 864175 + F 88 -4 -5.73978 | ATCTTGGTATGTAAG GTCCGGCGAT GTA AATGTCGGGC TTTTTTATTTATAAT SAV0779 864267 - 865007 + | carboxyesterase precursor-like protein TERM 867 867212 - 867194 - g 83 -7.4 -4.65895 | GCCTTTACCTAAAAA TGACCGCT CAC AGCGACCA GCAAGAGGTAAAACG SAV0780 865041 - 867413 + | ribonuclease R smpB 867435 - 867899 + | SsrA-binding protein TERM 868 867944 - 867966 + T 74 -8.6 -3.23149 | overlap 867942 867941 867946 TGATATAGTTATATG TGCTTTTGTA AAT TACAAAAGTA TGATTTGTTTGATTT TERM 869 867946 - 867964 + T 73 -9 -3.1541 | overlap 867944 867942 867941 ATATAGTTATATGTG CTTTTGTA AAT TACAAAAG TATGATTTGTTTGAT TERM 870 868356 - 868380 + T 90 -6.4 -5.63236 | CGTCTCCATTATATA GTCTGCGACC TTAGT GGTTGTAGGC TTTTTATTTTTGAGT TERM 871 868421 - 868405 - T 88 -8 -4.85599 | TTGAGTGCACAAAAA GTGCAC AGATA GTGCAC AGGATACAAAAAGAC TERM 872 868461 - 868434 - T 72 -4.1 -5.02502 | CACAGGATACAAAAA GACACAACCAA TTTTAG TTGGCAGTGCC TTATAAGTATTTAAC SAV0783 869568 - 868462 - | integrase TERM 873 869012 - 869064 + g 73 -7.4 -3.82603 | overlap 869021 TGTGTAGCAAGCGCC TCATAGAATTGATTGAATTGTT CTAACGTCC AATAATTCAATCGTTTCTGTGA TTCTATTTCAAAATT SAV0784 870158 - 869574 - | hypothetical protein SAV0785 870376 - 870585 + | hypothetical protein SAV0786 870621 - 870848 + | hypothetical protein SAV0787 870845 - 870991 + | hypothetical protein SAV0788 870984 - 871193 + | hypothetical protein TERM 874 871488 - 871451 - g 74 -3.4 -5.22289 | CATGAAATAGAAAAA GCATCATCTGAGAACT TTGGCG AGGAATCAGATGACGC AAAGAAATTAAAAAT SAV0789 871196 - 871513 + | hypothetical protein TERM 875 871513 - 871503 - f 72 -4 -5.13137 | opp_overlap 871503 CAAAGAAATTAAAAA TTAC AGA GTAA TTAATAAAAAATAAC SAV0790 871580 - 872449 + | hypothetical protein SAV0791 872466 - 873935 + | hypothetical protein SAV0792 874137 - 874583 + | hypothetical protein SAV0793 874585 - 874869 + | hypothetical protein SAV0794 874866 - 875507 + | hypothetical protein SAV0795 875957 - 876298 + | hypothetical protein SAV0796 876310 - 876888 + | hypothetical protein SAV0797 876906 - 877124 + | hypothetical protein TERM 876 877133 - 877153 + F 74 -9 -3.33798 | opp_overlap 877124 TAAATAGCAATGATT GCCTATCC AATTC GGGTAGGC TCTGTTTATAGGGGT SAV0798 877175 - 877702 + | hypothetical protein SAV0799 877669 - 878046 + | hypothetical protein SAV0800 878043 - 878612 + | bacteriophage terminase small subunit TERM 877 878756 - 878778 + F 76 -3.5 -5.44198 | opp_overlap 878756 AGCAATAAAATAAAG GAGATAATT GTGTA AAATATCTC TTTTTGTTATTTCTT TERM 878 878840 - 878870 + F 100 -9.1 -4.38712 | opp_overlap 878839, overlap 878841 TATATATATAACGAT CTAGCCATAACTC TATTC GGGTTATGGCTAC TTTTATAGGGGTAAA TERM 879 878841 - 878869 + F 100 -12.6 -3.22906 | opp_overlap 878839, overlap 878840 ATATATATAACGATC TAGCCATAACTC TATTC GGGTTATGGCTA CTTTTATAGGGGTAA SAV0801 878889 - 879857 + | hypothetical protein TERM 880 879872 - 879889 + F 91 -4.1 -6.09196 | overlap 879873 AAAGATATTTTTTAA TGTCACT TACG AGTGGCG TTTTTTTATTTTAAG SAV0802 880082 - 880276 + | hypothetical protein TERM 881 880488 - 880508 + F 100 -11.1 -4.37554 | opp_overlap 880488 TTCATGTCTATTTAA GCAGGTGCG TTA CACACCTGC TTTCTATTTACATTT TERM 882 880508 - 880488 - f 100 -13.3 -3.06183 | opp_overlap 880488 TTCATGTCTATTTAA GCAGGTGCG TTA CACACCTGC TTTCTATTTACATTT TERM 883 880592 - 880617 + F 100 -8.3 -5.7946 | opp_overlap 880592 880594, overlap 880594 TTTAAATGTAGATAA CAGGCAGGTAC TTCG GTACTTGCCTA TTTTTTTATTCACAA TERM 884 880617 - 880592 - f 74 -8.3 -3.57797 | opp_overlap 880592 880594, overlap 880594 TTTAAATGTAGATAA CAGGCAGGTAC TTCG GTACTTGCCTA TTTTTTTATTCACAA TERM 885 880594 - 880615 + F 100 -10.9 -4.54306 | opp_overlap 880594 880592, overlap 880592 TAAATGTAGATAACA GGCAGGTAC TTCG GTACTTGCC TATTTTTTTATTCAC TERM 886 880615 - 880594 - f 74 -8.7 -3.36054 | opp_overlap 880592 880594, overlap 880592 TAAATGTAGATAACA GGCAGGTAC TTCG GTACTTGCC TATTTTTTTATTCAC SAV0803 880821 - 881735 + | ferric hydroxamate receptor 1 TERM 887 881730 - 881712 - f 81 -2.5 -5.73563 | AGTAAATTAAAAAAA GAAATTT TAAAT AAATCTC ACTAGAAATAAGTTA TERM 888 882101 - 882091 - g 76 -4 -5.37865 | TTAATAACGAAAAAA TATC GTG GATA GATTTAGATGTACCT SAV0804 881793 - 882641 + | hypothetical protein TERM 889 882699 - 882713 + F 75 -4.3 -5.2696 | ATTAAAAGTAAAGTG CACAA ATATC TTGTG TTTTTTCAATTTTAA TERM 890 882842 - 882866 + F 100 -10 -5.62045 | GTCTCCATATTTGTA GCCTACAACC TTTGT GGATGTAGGC TTTTTTATTATGTGT SAV0805 883017 - 883157 + | hypothetical protein TERM 891 883166 - 883182 + F 70 -3.8 -5.10461 | TGGATAAATGGCTAC TGAAAA AGAAC TTTTCA TTTTTGTTACGTCAC SAV0806 883221 - 883439 + | hypothetical protein TERM 892 883645 - 883688 + T 72 -8.4 -3.28265 | opp_overlap 883646, overlap 883643 883639 883646 883648 TTATAACTATAAAAA ATAGCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGCTAA TCTTAGTATGTTTAT TERM 893 883646 - 883687 + T 89 -11.9 -2.55874 | opp_overlap 883646, overlap 883645 883643 883639 883648 TATAACTATAAAAAA TAGCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGCTA ATCTTAGTATGTTTA TERM 894 883687 - 883646 - T 100 -16.3 -5.39755 | opp_overlap 883646 883645 883643 883639 883648 TATAACTATAAAAAA TAGCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGCTA ATCTTAGTATGTTTA TERM 895 883648 - 883685 + T 76 -10.1 -2.80437 | opp_overlap 883646, overlap 883646 883645 883643 883639 TAACTATAAAAAATA GCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGC TAATCTTAGTATGTT SAV0807 884008 - 883706 - | hypothetical protein TERM 896 883817 - 883834 + g 91 -2.8 -6.01369 | TTCTCTAATGTTTTC CAATTT TGTTTT AAATTG TTTTTTTGTTATTTG SAV0808 885111 - 884383 - | hypothetical protein TERM 897 885176 - 885153 - H 78 -6.8 -4.63184 | opp_overlap 885153 AATTTATTTTAAAAA CTCTAAATGA CTTA TCATTTTGAG TAATTAAACAAAGTT SAV0809 885709 - 886230 + | hypothetical protein SAV0810 886369 - 886899 + | hypothetical protein TERM 898 887215 - 887186 - g 89 -3.5 -5.84011 | opp_overlap 887204 887205 AAGAAAAAAGAAAAA CACGCAATTCG GAAAAAAT CGATTGGCGTG GCTTCAGTGCTTGTA fnb 887162 - 889969 + | fibrinogen-binding protein TERM 899 890027 - 890010 - f 95 -11.3 -3.73914 | opp_overlap 890010 ATGATTCATGAAGAA GCCACCT TAAA AGGTGGC TTTTTTACTTGGATT TERM 900 890010 - 890027 + F 100 -11.3 -5.29385 | opp_overlap 890010 ATGATTCATGAAGAA GCCACCT TAAA AGGTGGC TTTTTTACTTGGATT SAV0812 890190 - 891692 + | secreted von Willebrand factor-binding protein TERM 901 891799 - 891834 + F 81 -5.7 -5.24449 | opp_overlap 891804, overlap 891802 CAATGATGCAATCTA GTA-TAGTCCACATTCT AAAC AGG-TGTGGACTATTAC TTTTTTCACTTTATA TERM 902 891802 - 891830 + F 76 -7.6 -3.95677 | gap 1, opp_overlap 891804, overlap 891799 TGATGCAATCTAGTA TAGTCCACATTCT AAAC AGG-TGTGGACTA TTACTTTTTTCACTT ssp 892045 - 893067 + | extracellular ECM and plasma binding protein TERM 903 893116 - 893148 + F 100 -8.6 -5.1361 | opp_overlap 893116 893120, overlap 893107 893144 ACCTATTATTTTAAA TATAGTCTACAATC TATGT GGTTGTAGGCTGTA TTTTTTGCAGTTTAT SAV0814 893402 - 893923 + | hypothetical protein TERM 904 894054 - 894078 + F 76 -5 -5.0925 | TGTCTCGATATGATA GTCTGCAACG ATTCA TGTTGTAGGC TTTTTAATTTTACAA nuc 894264 - 894950 + | staphylococcal nuclease cspC 895307 - 895507 + | cold-shock protein C TERM 905 895496 - 895514 + T 72 -7.6 -3.62046 | opp_overlap 895496 CAAGCTGCAAACGTA GTTAAAAT GTA ATTTTAAC TTATTCAAACAGTCC TERM 906 895524 - 895543 + T 93 -5.7 -5.75599 | opp_overlap 895524 TTTAACTTATTCAAA CAGTCCT TATTAT AGGGCTG TTTTTTTATGCTTTA TERM 907 895767 - 895716 - T 83 -3.4 -5.7946 | overlap 895717 TTTTGAATAAAAAAA GCGCCA-ATACAGAACTTTAAT AATGACGAGA ATTAAAG-TCTGTATATGGCGA TAACAAGAAGTAATG TERM 908 895766 - 895717 - T 72 -6.9 -4.06592 | overlap 895716 TTTGAATAAAAAAAG CGCCA-ATACAGAACTTTAAT AATGACGAGA ATTAAAG-TCTGTATATGGCG ATAACAAGAAGTAAT TERM 909 895805 - 895781 - T 81 -9.5 -3.63862 | overlap 895777 GATAACAAGAAGTAA TGTTAAACACT CAA AATGTTTAACA ATAATAGGATACCAC SAV0817 896217 - 895999 - | hypothetical protein SAV0818 896563 - 896279 - | hypothetical protein SAV0819 897220 - 896651 - | hypothetical protein TERM 910 897388 - 897356 - R 100 -15.8 -5.66229 | ATTAAGAATAAAAAA CAGTCTGAAACATC ATTGA GACGTTTCAGACTG GATATAAAATGAATT SAV0820 897596 - 897408 - | hypothetical protein SAV0821 897885 - 897625 - | hypothetical protein TERM 911 898127 - 898148 + H 85 -10.3 -3.58522 | opp_overlap 898127 CAGATATCAAAAAAA TGTGCAAAA TCAC TTTTGCACA TTTACAAATACTAGT TERM 912 898148 - 898127 - H 100 -10.3 -5.60864 | opp_overlap 898127 CAGATATCAAAAAAA TGTGCAAAA TCAC TTTTGCACA TTTACAAATACTAGT SAV0822 898226 - 898429 + | hypothetical protein SAV0823 898662 - 898426 - | hypothetical protein SAV0824 898887 - 899468 + | phosphoglycerate mutase TERM 913 899515 - 899477 - T 100 -9.1 -4.73677 | gap 1, opp_overlap 899477 899489 TTTATAATAAATAAA GCGTTATAC-ATAGACAC AAGT ATGTCTTTTGTATAACGC TTTTAAAATACAACT TERM 914 899477 - 899515 + T 81 -8.4 -4.13945 | gap 1, opp_overlap 899477, overlap 899489 TTTATAATAAATAAA GCGTTATAC-ATAGACA CAAGTA TGTCTTTTGTATAACGC TTTTAAAATACAACT SAV0825 900158 - 899541 - | amino acid transporter LysE TERM 915 900251 - 900227 - R 100 -10.1 -5.69793 | opp_overlap 900230 ATATCAAATAAAAAA CAACTACTCAA TAG TAGAGTAGTTG TATGAAAAATAGAAC SAV0826 900807 - 900313 - | hypothetical protein SAV0827 901015 - 901065 + | hypothetical protein TERM 916 901149 - 901122 - T 95 -7.8 -5.49569 | opp_overlap 901121 901122, overlap 901125 CACGAATAGAAAAAA TAACCAACCAAA AATT TTTGGTTGGCAA ATTTGAATTTTATGT TERM 917 901146 - 901125 - T 100 -11.7 -4.80737 | opp_overlap 901122 901121, overlap 901122 GAATAGAAAAAATAA CCAACCAAA AATT TTTGGTTGG CAAATTTGAATTTTA SAV0828 901628 - 901206 - | general stress protein SAV0829 901776 - 902492 + | 3-dehydroquinate dehydratase SAV0830 902575 - 903114 + | hypothetical protein SAV0831 903585 - 903265 - | thioredoxin SAV0832 903729 - 904085 + | hypothetical protein SAV0833 904243 - 904623 + | glycine cleavage system protein H TERM 918 904635 - 904657 + F 100 -11.4 -4.94262 | ATAATCACCGTGTAA CTCCTTAATC TAA GATTGAGGAG TTTATTTTTAGTCTG SAV0834 904802 - 905680 + | hypothetical protein TERM 919 905830 - 905848 + F 81 -10.3 -3.20164 | ATCCAATTTCTCTTT GTTGGGG CCCAT CCCCAAC TTGCATTGCCTGTAG TERM 920 905928 - 905916 - f 90 -7.7 -5.1925 | opp_overlap 905915 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT TERM 921 906061 - 906041 - f 81 -9.1 -3.61527 | overlap 906043 ATTTAAAAATAGGAA TACATGAGT AAA ACTCATGCA TAAGAAATACTAATT TERM 922 906059 - 906043 - f 78 -9.5 -3.37164 | overlap 906041 TTAAAAATAGGAATA CATGAGT AAA ACTCATG CATAAGAAATACTAA SAV0835 906477 - 906863 + | hypothetical protein SAV0836 906856 - 907152 + | hypothetical protein TERM 923 907329 - 907364 + F 100 -8.5 -5.92399 | opp_overlap 907317 907311 907308, overlap 907317 907311 907308 AAACAATACTACTAT TGCTTTCTCAATTTT TCTATC GATATTGAGAAAGCA TTTTTTATTTTATTA SAV0837 907402 - 908427 + | ABC transporter ATP-binding protein SAV0838 908420 - 909115 + | ABC transporter permease SAV0839 909133 - 909954 + | ABC transporter substrate-binding protein TERM 924 909967 - 909991 + F 100 -9.3 -4.98531 | TAAATCATATTAATG GCTCAGTAACG TGA TGTTGCTGGGC TTTTTAATTTAAACA SAV0840 910308 - 910502 + | sigmaB-controlled protein TERM 925 910536 - 910567 + T 100 -9.5 -5.0916 | AATACACTGCACATG CCACTTAGTCGGT ATAACC ATCGGCTAGGTGG TTTTTGTATTAAAAA SAV0841 911587 - 910736 - | hypothetical protein SAV0842 911915 - 912676 + | ABC transporter ATP-binding protein SAV0843 912774 - 914081 + | ABC transporter SAV0844 914196 - 915437 + | aminotransferase NifS-like protein SAV0845 915427 - 915891 + | nitrogen fixation protein NifU SAV0846 916042 - 917439 + | ABC transporter-associated protein int 918556 - 917507 - | integrase TERM 926 917892 - 917923 + g 86 -5.3 -5.61913 | TATATAGTTCTATTA GAGATGTCCAT TGTTTTATTT ATGGATATCTC TTTTTTGTATTTATT TERM 927 918611 - 918595 - H 82 -8 -4.40692 | GGCAAAAAATAATAA GGGTAG GCGAG CTACCC GAAATTTAGTACTAG TERM 928 918616 - 918634 + H 71 -9 -2.87468 | opp_overlap 918616 GCGAGCTACCCGAAA TTTAGTAC TAG GTACTAAA TGTGATATAATAAAA TERM 929 918634 - 918616 - H 77 -9 -3.61178 | opp_overlap 918616 GCGAGCTACCCGAAA TTTAGTAC TAG GTACTAAA TGTGATATAATAAAA int 918668 - 918847 + | excisionase SAV0849 919759 - 918827 - | hypothetical protein TERM 930 919140 - 919126 - G 73 -8.6 -3.25942 | ACGTCTCTATAGCAA CAGCAA AGG TTGCTG CAGCTGGCAAATACA SAV0850 920255 - 919791 - | hypothetical protein SAV0851 920597 - 920268 - | hypothetical protein SAV0852 920758 - 920949 + | hypothetical protein TERM 931 921092 - 921072 - T 90 -6.3 -5.63517 | TCGCTAAAGAAAAAA GTAAATTAA AAC TCAATTTAC TAAAACATGCAAACA TERM 932 921160 - 921127 - T 85 -8.3 -4.63048 | gap 1, opp_overlap 921130 TTTAGAAACAAGAAA CAACCCTG-AACTGTT GCG AGCAGTTGCAGAGTTG CTTAAAGAGATTAAT SAV0854 921380 - 921171 - | hypothetical protein SAV0855 921437 - 922216 + | anti-repressor SAV0856 922217 - 922441 + | hypothetical protein TERM 933 922535 - 922515 - g 89 -6.3 -5.63517 | TCGCTAAAGAAAAAA GTAAATTAA AAC TCAATTTAC TAAAACATGCAAACA TERM 934 922603 - 922570 - g 84 -8.3 -4.63048 | gap 1, opp_overlap 922573 TTTAGAAACAAGAAA CAACCCTG-AACTGTT GCG AGCAGTTGCAGAGTTG CTTAAAGAGATTAAT SAV0857 922481 - 922624 + | hypothetical protein SAV0858 923293 - 922646 - | hypothetical protein SAV0859 923364 - 923585 + | hypothetical protein TERM 935 923770 - 923745 - f 100 -9.1 -5.95946 | TGAAGAATAAAAAAA CTGCTACTTGC GACA ACAAGTAACAG TATCAAGTACTTAAG SAV0860 923832 - 924134 + | hypothetical protein SAV0861 924410 - 924276 - | hypothetical protein SAV0862 924409 - 924630 + | hypothetical protein SAV0863 924623 - 924745 + | hypothetical protein TERM 936 924986 - 924966 - f 78 -6.1 -4.7339 | AACAAAGCCCAAAAA CGATGCTTC GTT AAAGCTTCG GCTTTACACGGTCTA SAV0864 925247 - 925672 + | single strand DNA binding protein SAV0865 925683 - 926234 + | hypothetical protein SAV0866 926235 - 926909 + | hypothetical protein TERM 937 926975 - 926931 - T 76 -3.7 -5.3798 | gap 1, overlap 926933 TAAGAATAATAAAAA TAGCACTCCTAATCGTCATC TTGGCG GAAGA-GATTAGAAGCGCAA AAAAAAATTAAAAAA TERM 938 926973 - 926933 - T 72 -6.3 -4.28653 | gap 1, overlap 926931 AGAATAATAAAAATA GCACTCCTAATCGTCATC TTGGCG GAAGA-GATTAGAAGCGC AAAAAAAAATTAAAA SAV0867 927330 - 927049 - | hypothetical protein TERM 939 927717 - 927702 - g 72 -4.8 -4.67353 | opp_overlap 927702 CTATTGACGCAAAAA TCAATA CCCC TATTGA TAATTCTGTCAATAC TERM 940 927830 - 927813 - g 71 -7.7 -3.58505 | overlap 927811 GTATTAATAATAATA GCGCAAC TGAC GTTACGC ATGAGCAATTTGAGG SAV0868 927395 - 928126 + | hypothetical protein SAV0869 928139 - 928924 + | hypothetical protein SAV0870 928921 - 929079 + | hypothetical protein SAV0871 929092 - 929313 + | hypothetical protein SAV0872 929323 - 929727 + | hypothetical protein SAV0873 929919 - 930290 + | phi PVL ORF 50 SAV0874 930291 - 930539 + | phi PVL ORF 51-like protein SAV0875 930551 - 930802 + | phi PVL ORF 52-like protein SAV0876 930795 - 931331 + | phi ETA orf 34-like protein SAV0877 931368 - 931574 + | hypothetical protein SAV0878 931571 - 931765 + | hypothetical protein SAV0879 931762 - 931965 + | hypothetical protein SAV0880 931958 - 932194 + | hypothetical protein SAV0881 932184 - 932570 + | hypothetical protein SAV0882 932570 - 932743 + | int gene activator RinB SAV0883 932801 - 932890 + | hypothetical protein SAV0884 932905 - 933324 + | hypothetical protein TERM 941 933438 - 933462 + F 90 -7.2 -5.46698 | gap 1, overlap 933438 ATAAAGGATCTATGT GGG-TTGGCTG ATTA TAGCCAATCCC TTTTTTAATTTTAAA TERM 942 933438 - 933461 + F 86 -9.6 -3.86392 | overlap 933438 ATAAAGGATCTATGT GGGTTGGCTG ATTA TAGCCAATCC CTTTTTTAATTTTAA SAV0885 933511 - 933951 + | small terminase SAV0886 933938 - 935215 + | large terminase SAV0887 935226 - 936761 + | hypothetical protein TERM 943 936887 - 936918 + G 73 -8.2 -3.67597 | opp_overlap 936890 936891, overlap 936891 ATTGAATATGATGAT TAAGCGCATTGA AAAAGAGA TCAATGCGTTTA TTGTTAAGTACGGAG TERM 944 936891 - 936914 + G 76 -6.8 -4.46854 | opp_overlap 936890 936891, overlap 936887 AATATGATGATTAAG CGCATTGA AAAAGAGA TCAATGCG TTTATTGTTAAGTAC SAV0888 936768 - 937763 + | hypothetical protein SAV0889 937836 - 938006 + | hypothetical protein TERM 945 938007 - 938032 + F 86 -6.2 -5.36441 | GAACCTCTCTTTTAA TAGCTAGCAC TTAATT GTGTTGGCTA TTTTTTATGTCCAAA SAV0890 938141 - 938755 + | hypothetical protein SAV0891 938769 - 939077 + | hypothetical protein SAV0892 939209 - 939742 + | hypothetical protein SAV0893 939764 - 940051 + | hypothetical protein SAV0894 940060 - 940392 + | hypothetical protein SAV0895 940389 - 940691 + | hypothetical protein SAV0896 940691 - 941038 + | hypothetical protein TERM 946 941098 - 941153 + G 85 -4.1 -5.67063 | gap 1, opp_overlap 941098 TATGAAACGCTACAA GGATATGGATTC-CCTGTTATTTCTC GTAAA GAGATGCAACAAGAGATTCCGTATCC TTTTTTTGTAATAAA SAV0897 941050 - 941433 + | hypothetical protein TERM 947 941522 - 941512 - g 71 -5.4 -4.58685 | AAAGCTGGCGAAAAA GTAG ATG CTAC TAAAATGCTTTTTTT SAV0898 941452 - 942033 + | hypothetical protein TERM 948 942053 - 942037 - f 88 -8 -4.89852 | opp_overlap 942037 GGAGAGGTATAAAAA TAGGGC GTTAA GCCCTA TTTATTTTGTTTAAA TERM 949 942037 - 942053 + F 88 -8 -4.96996 | opp_overlap 942037 GGAGAGGTATAAAAA TAGGGC GTTAA GCCCTA TTTATTTTGTTTAAA SAV0899 942095 - 942460 + | hypothetical protein SAV0900 942580 - 942834 + | hypothetical protein TERM 950 943110 - 943100 - g 79 -5.4 -5.20333 | GATCTACAACAAAAA GCTT TAG AAGC AAGTTTTGAATTAAA TERM 951 944939 - 944958 + G 73 -9.4 -2.81312 | opp_overlap 944946, overlap 944943 944949 GGTATTTTAGGTGGT CCAATAAC AATA GTTATTGG TGTAATCGCTGCATT TERM 952 945017 - 945007 - g 73 -4 -5.06816 | ATTTTGGAATAAAAA TGAA GGA TTCA GAAACTTTATTATAA TERM 953 945382 - 945400 + G 71 -7.5 -3.56099 | TTGGAATTTGTTAGT CACTGTA ATAAC TACAGTG TTTACCACAATTATG SAV0901 942851 - 946315 + | hypothetical protein TERM 954 946470 - 946509 + G 81 -5.9 -5.00895 | overlap 946473 ACGGTCGTATATTAA TGGGGAGCAATTATATC AGTAGA GATATAGTTGTTCCTTG TTTTTGTGTGGTAAA TERM 955 946473 - 946506 + G 100 -9.8 -4.59846 | overlap 946470 GTCGTATATTAATGG GGAGCAATTATATC AGTAGA GATATAGTTGTTCC TTGTTTTTGTGTGGT SAV0902 946328 - 947275 + | phi ETA orf 54-like protein TERM 956 947805 - 947831 + G 93 -9.5 -4.58946 | ATATAAGTTTGTATT GACGCCTTTTG CAAAT CAAAAAGCGTC TTATTTTATTTCTGA TERM 957 948805 - 948843 + G 72 -4.8 -4.78839 | gap 1 GCAGGCGTACCGATA GGCACTGATAAAACG GATACTAAAA CGTTTTAT-GGTGCC TTTTGTTCTGCAATT SAV0903 947284 - 949185 + | phi ETA orf 55-like protein TERM 958 949284 - 949300 + G 72 -5.1 -4.66057 | AATTTCAAGCTTATT TCAGACA TGC TGACTGA TTTTAATTTCTCTCT SAV0904 949200 - 951110 + | phi ETA orf 56-like protein SAV0905 951110 - 952933 + | phiETA ORF57-like protein SAV0906 952933 - 953310 + | phiETA ORF58-like protein SAV0907 953314 - 953487 + | phiETA ORF59-like protein TERM 959 953475 - 953497 + F 72 -4.8 -4.98531 | overlap 953469 AACAAAAGATGAAAA GTCACAGGTG TAA TGCTTGTGGC TTTTTAATTTAACAA SAV0908 953528 - 953827 + | phiETA ORF60-like protein TERM 960 953914 - 953933 + F 100 -10 -5.54338 | opp_overlap 953914 953912 AAATAACAGTTAAGA GTCAGTGC TTCG GCACTGGC TTTTTATTTTGATTG TERM 961 954512 - 954498 - g 86 -2.8 -5.80727 | overlap 954499 AAAAATAATAAAAAA GTTCCA ATT TGGAAA GATGTAACAACTATA SAV0909 953964 - 955862 + | cell wall hydrolase SAV0910 955875 - 957113 + | tail fiber SAV0911 957119 - 957514 + | phi ETA orf 63-like protein TERM 962 957522 - 957539 + F 100 -8.5 -5.80951 | opp_overlap 957522 TTGAATAATTTTAAA CGACTAA TTTT TTAGTCG TTTTTTATTTTGGAT TERM 963 957539 - 957522 - f 77 -8.5 -3.72051 | opp_overlap 957522 TTGAATAATTTTAAA CGACTAA TTTT TTAGTCG TTTTTTATTTTGGAT TERM 964 957623 - 957602 - g 70 -4.5 -4.71061 | opp_overlap 957607 ATTGAGATTCAAAAA TAAAGCAGT ACTA ACTGGTTTA GTTGGAGCGTTGTTG SAV0912 957570 - 958007 + | holin TERM 965 958376 - 958360 - g 70 -8 -3.26717 | ACTGACAGAATCGAA CAACCC GGCTG GGGTTG GGAAAAAGTTACAAG SAV0913 957988 - 959433 + | amidase TERM 966 959458 - 959478 + F 79 -7.5 -4.37554 | GTCATGTCTATTTGA GCAGGTGCG TTA CATACCTGC TTTCTATTTACATTT TERM 967 959587 - 959562 - f 74 -8.3 -3.57797 | opp_overlap 959562 959564, overlap 959564 TTTAAATGTAGATAA CAGGCAGGTAC TACG GTACTTGCCTA TTTTTTATGCAAATT TERM 968 959562 - 959587 + F 93 -8.3 -5.25803 | opp_overlap 959562 959564, overlap 959564 TTTAAATGTAGATAA CAGGCAGGTAC TACG GTACTTGCCTA TTTTTTATGCAAATT TERM 969 959585 - 959564 - f 74 -8.7 -3.36054 | opp_overlap 959562 959564, overlap 959562 TAAATGTAGATAACA GGCAGGTAC TACG GTACTTGCC TATTTTTTATGCAAA TERM 970 959564 - 959585 + F 100 -10.9 -4.25873 | opp_overlap 959564 959562, overlap 959562 TAAATGTAGATAACA GGCAGGTAC TACG GTACTTGCC TATTTTTTATGCAAA TERM 971 959631 - 959611 - f 78 -3.3 -5.58209 | opp_overlap 959619, overlap 959614 GCAAATTTAAAAAAA CACTTGCTT AAT AAACAATTG TTTAGTATAATTATA TERM 972 959765 - 959719 - g 82 -5.5 -5.27206 | TAGACATAATAAAAA CACTTCTAGAA-CATCAAGTATT GGC AGTACT-GATAATTCCAGAAGTG TTAAAACAACTTAGA SAV0914 959700 - 959828 + | hypothetical protein SAV0915 959899 - 960009 + | hypothetical protein TERM 973 960379 - 960360 - f 71 -7.2 -3.78934 | gap 1 GGTGGTGCATAACAA GTCGCTGAA ATA TTC-GCGAC ATAATAAAGCATATT TERM 974 960426 - 960455 + F 76 -6.6 -4.49756 | gap 1 GCTAAAGGCACATCT TAACCACCCA-TA CTAGT TACTGGGTGGTTG TTTTAGTGTTTACAA SAV0916 960529 - 961161 + | hypothetical protein SAV0917 961154 - 961585 + | hypothetical protein TERM 975 961656 - 961683 + T 90 -6.4 -5.5112 | gap 1 CTGCGGAATGCACTC GAGGTTGACTGTT ACT GACAGT-AGCCTC TTTTTTATTCCTACA TERM 976 961738 - 961710 - T 86 -6.1 -5.35354 | gap 1, opp_overlap 961710 961707 TACACAACCAAAAAA CCACACCACCTA TTAATT TAGG-AGTGTGG TTATTTTAATATATG TERM 977 962020 - 961993 - T 83 -10 -3.70446 | opp_overlap 961999, overlap 961999 TGATACTGAATATAA CAAAAAGCCACA TTAC TGTGGCTTTTTT TGTTTTATAACTAAA TERM 978 961999 - 962014 + T 100 -9 -6.14618 | opp_overlap 961993 961999 TGAATATAACAAAAA GCCACA TTAC TGTGGC TTTTTTTGTTTTATA TERM 979 962014 - 961999 - T 100 -9 -5.29716 | opp_overlap 961999, overlap 961993 TGAATATAACAAAAA GCCACA TTAC TGTGGC TTTTTTTGTTTTATA SAV0918 962565 - 962251 - | hypothetical protein TERM 980 962461 - 962473 + g 74 -6.3 -4.28188 | opp_overlap 962460, overlap 962457 TAAGCTTCGACTAAG TGCAT AAT ATGCA TTTATATTATGACTA TERM 981 963918 - 963908 - g 76 -4 -5.2197 | GATAAAAAGGAAAAA GAAA AAC TTTC TCAACAGCAAATTCA SAV0919 962930 - 963970 + | hypothetical protein SAV0920 963984 - 965051 + | 2-nitropropane dioxygenase SAV0921 965436 - 966284 + | hypothetical protein SAV0922 966297 - 967124 + | hypothetical protein SAV0923 967151 - 968470 + | hypothetical protein TERM 982 969372 - 969340 - g 75 -4.9 -4.84642 | overlap 969341 GGTAAATTAAGAAAA GTGGCAATGGATAAA GGG TTTAAACATTGCCAA GCTGGACCTTTAGTA TERM 983 969371 - 969341 - g 72 -8.4 -3.497 | overlap 969340 GTAAATTAAGAAAAG TGGCAATGGATAAA GGG TTTAAACATTGCCA AGCTGGACCTTTAGT lipA 968554 - 969471 + | lipoyl synthase SAV0925 969601 - 969984 + | hypothetical protein TERM 984 970089 - 970110 + F 82 -4.4 -5.52384 | overlap 970092 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 985 971506 - 971476 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 970190 - 971509 + | IS1181 transposase SAV0927 971849 - 971583 - | hypothetical protein SAV0928 971947 - 972381 + | hypothetical protein SAV0929 972381 - 973160 + | N-acetyl-glucosamine catabolism-like protein SAV0930 973193 - 974152 + | glycerate dehydrogenase TERM 986 974263 - 974292 + F 89 -9.5 -4.20806 | opp_overlap 974263, overlap 974267 AATTCAATAACATTA TAAACTCGTCATA TTAA TGTGATGAGTTTA TTTGATTTTGACGTA TERM 987 974267 - 974288 + F 73 -5.9 -4.67692 | opp_overlap 974263, overlap 974263 CAATAACATTATAAA CTCGTCATA TTAA TGTGATGAG TTTATTTGATTTTGA SAV0931 974564 - 974716 + | hypothetical protein dltA 974732 - 976189 + | D-alanine--D-alanyl carrier protein ligase dltB 976186 - 977400 + | DltB membrane protein dltC 977418 - 977654 + | D-alanine--poly(phosphoribitol) ligase subunit 2 dltD 977651 - 978826 + | poly (glycerophosphate chain) D-alanine transfer protein TERM 988 978880 - 978829 - T 87 -8.4 -4.78661 | gap 1, opp_overlap 978829 978835 ACCTAAAAATTAAAA TACAAATAGCACATA-ACTCAACGA TTT TGATTGAGCGTATGTGCTATTTTTA TATTTTAAATTTCAT TERM 989 978835 - 978874 + T 71 -3.1 -5.28983 | gap 2, opp_overlap 978829, overlap 978829 AAATTAAAATACAAA TAGCACATA-ACTCAA-CG ATTT TGATTGAGCGTATGTGCTA TTTTTATATTTTAAA TERM 990 979043 - 979003 - T 70 -3.7 -5.1287 | gap 3, opp_overlap 979003 TTGACAGCGAAAAAA GACAGGTAATAACTG-ATTA TAAA TAATTCAGT-ATT-CCTGTC TTTGTTGTTATTCAT SAV0936 979331 - 979089 - | hypothetical protein TERM 991 979284 - 979269 - G 71 -3.2 -5.11063 | ATCACGTAATAAAAA TGGACG AAGA CGTTCA ATAACTTCTGCTACT SAV0937 979447 - 979755 + | hypothetical protein TERM 992 979804 - 979773 - T 100 -8.9 -5.27206 | opp_overlap 979773 TACACATAACAAAAA GCAATGTCAGT AATAGTGTGA ACTGACATTGC TTTTTAATTTTAACC TERM 993 979773 - 979804 + T 100 -8.9 -5.0925 | opp_overlap 979773 TACACATAACAAAAA GCAATGTCAGT AATAGTGTGA ACTGACATTGC TTTTTAATTTTAACC SAV0938 980878 - 979814 - | putative NADH dehydrogenase SAV0939 981195 - 981431 + | hypothetical protein TERM 994 981783 - 981769 - g 75 -8.6 -3.36327 | opp_overlap 981778, overlap 981778 GTAGTTCATTTAGAA CTGCAA AAG TTGCAG GTAATCCTGAAAATT SAV0940 981444 - 981803 + | hypothetical protein TERM 995 982037 - 981998 - f 71 -7.4 -3.75629 | CATTTTTAATCGAAA TCAGGCTACGAAAAAATT AATT AATTTTTTCACAATCTGA CTGAATCTTGCTTGA SAV0941 982257 - 983465 + | putative NADH dehydrogenase TERM 996 983556 - 983504 - f 70 -5.7 -4.31065 | opp_overlap 983515 983519, overlap 983519 ACACATAAAATTAAA TTATTCATTTATAAAGTCCTTCAGT GTC ACTGAAGGGCTTTATTGTTGTACAA TTTGAAGTGAGTAAC TERM 997 983515 - 983545 + F 100 -16.4 -3.83262 | opp_overlap 983504 983519, overlap 983519 TAAATTATTCATTTA TAAAGTCCTTCAGT GTC ACTGAAGGGCTTTA TTGTTGTACAATTTG TERM 998 983541 - 983519 - f 93 -10.6 -3.92869 | opp_overlap 983515 983519, overlap 983504 TTATTCATTTATAAA GTCCTTCAGT GTC ACTGAAGGGC TTTATTGTTGTACAA TERM 999 983519 - 983541 + F 100 -12.8 -4.51812 | opp_overlap 983519 983504, overlap 983515 TTATTCATTTATAAA GTCCTTCAGT GTC ACTGAAGGGC TTTATTGTTGTACAA ampA 983596 - 985071 + | cytosol aminopeptidase SAV0943 985482 - 986798 + | transport protein SAV0944 986817 - 987191 + | hypothetical protein TERM 1000 987197 - 987241 + T 90 -7.4 -5.626 | gap 2, opp_overlap 987194 987197 987211 TTTAAAATAAAAGAA CTGCTAGCTGAAATGTTATGAG ATA TTCATAAC-TA-CGGCTAGCAG TTTTTTTATGCGCTA SAV0945 988401 - 987247 - | hypothetical protein TERM 1001 988611 - 988570 - R 100 -14 -5.10163 | opp_overlap 988570 AATGTCAAAAGAAAA CAGCAGTAAAATCATTCC TAATTT GGAATCATCTTACTGCTG TTTGTTGTTGATTTA TERM 1002 988570 - 988611 + r 100 -11.8 -4.54404 | opp_overlap 988570 AATGTCAAAAGAAAA CAGCAGTAAAATCATTCC TAATTT GGAATCATCTTACTGCTG TTTGTTGTTGATTTA mnhG 989006 - 988650 - | putative monovalent cation/H+ antiporter subunit G TERM 1003 988795 - 988781 - G 70 -7.2 -3.73234 | opp_overlap 988780 TAATTAATACAAAGA TAATCG CAA CGATTA ATTGCATATTTACAA mnhF 989277 - 988984 - | putative monovalent cation/H+ antiporter subunit F TERM 1004 989171 - 989157 - G 75 -8.6 -3.39529 | TTAATTGAAGACCAA TCGCAT CTA ATGCGA CAACACGATCGGCAA mnhE 989756 - 989277 - | putative monovalent cation/H+ antiporter subunit E mnhD 991254 - 989758 - | putative monovalent cation/H+ antiporter subunit D mnhC 991588 - 991247 - | putative monovalent cation/H+ antiporter subunit C mnhB 992016 - 991588 - | putative monovalent cation/H+ antiporter subunit B mnhA 994414 - 992009 - | monovalent cation/H+ antiporter subunit A TERM 1005 992038 - 992048 + g 80 -6.8 -4.72386 | TCACCTCGTTACCTT GCGT TTG ACGC TTTTTACGTAATTTA SAV0953 994928 - 994545 - | hypothetical protein SAV0954 994992 - 995585 + | peptidyl-prolyl cis-trans isomerase-like protein SAV0955 996117 - 996377 + | polyribonucleotide nucleotidyltransferase TERM 1006 996488 - 996440 - f 100 -16.5 -2.62515 | opp_overlap 996445, overlap 996445 AAGTTTCTTAGACTA TAAAAGAGATTAGTATCTATTAA ATT TTATTAGATACTAATCTCTTTTT GTCTACGATAACGTA TERM 1007 996483 - 996445 - f 100 -16.4 -4.50976 | opp_overlap 996445, overlap 996440 TCTTAGACTATAAAA GAGATTAGTATCTATTAA ATT TTATTAGATACTAATCTC TTTTTGTCTACGATA TERM 1008 996445 - 996483 + F 100 -16.4 -4.9792 | opp_overlap 996445 996440 TCTTAGACTATAAAA GAGATTAGTATCTATTAA ATT TTATTAGATACTAATCTC TTTTTGTCTACGATA TERM 1009 997045 - 997029 - g 76 -4.4 -5.20534 | gap 1, overlap 997031 AGCAATGAAGAAAAA CG-GTGC CAAA GCACTCG TACAAATACATCATG SAV0956 996739 - 997866 + | putative NADH-dependent flavin oxidoreductase rocD 998174 - 999364 + | ornithine--oxo-acid transaminase gudB 999473 - 1000717 + | NAD-specific glutamate dehydrogenase TERM 1010 1000736 - 1000777 + T 100 -9.6 -5.07652 | opp_overlap 1000740 ATTATCATATGTGAT TTAACGAGCTTGGGAC AGAAAACAAA GCCCTAAGCTCGTTAA TTTTATTTTAGCAGC TERM 1011 1001002 - 1000958 - T 91 -8.7 -4.74132 | opp_overlap 1000960, overlap 1000960 ATAGTTGATCAAAAA GACAGCAGTAGGATAATTTCA ATT TGGAAATATCTTACTGCTGTT TTTTATAGTAATAGC TERM 1012 1000960 - 1001000 + T 100 -15.7 -5.32882 | opp_overlap 1000958 1000960 AGTTGATCAAAAAGA CAGCAGTAGGATAATTTCA ATT TGGAAATATCTTACTGCTG TTTTTTATAGTAATA TERM 1013 1001000 - 1000960 - T 100 -11.3 -3.98658 | opp_overlap 1000960, overlap 1000958 AGTTGATCAAAAAGA CAGCAGTAGGATAATTTCA ATT TGGAAATATCTTACTGCTG TTTTTTATAGTAATA glpQ 1001983 - 1001054 - | glycerophosphoryl diester phosphodiesterase TERM 1014 1002048 - 1002066 + r 71 -4.6 -4.69559 | CTACAAAAACCTGCT TGTGAAAA CGC TTTACACA TTTCTTTTACAATTT TERM 1015 1002209 - 1002175 - R 84 -8.8 -4.34947 | AAGAGAGCATTAAAA TACCCACAATGT AATTTTAATAG ACATTGTGGGTA GGTAGATTAACGTAT argH 1003604 - 1002225 - | argininosuccinate lyase argG 1004799 - 1003594 - | argininosuccinate synthase pgi 1005150 - 1006481 + | glucose-6-phosphate isomerase TERM 1016 1006553 - 1006594 + F 100 -16.2 -5.42975 | opp_overlap 1006549 1006547 TTTAAAGCATATTTT CGAGGTTGTCATTACA AATGTAAAAA TGTAATGACAACCTCG TTTTTATTTATATGC TERM 1017 1006712 - 1006735 + F 70 -5.4 -4.58308 | overlap 1006714 TACTAGAGACTGATT TATTAGCATG ATTA CATGTTAATG TTTCTTTACTTAGTA SAV0963 1006806 - 1007381 + | hypothetical protein spsA 1007386 - 1007910 + | type-I signal peptidase spsB 1007926 - 1008501 + | type-1 signal peptidase 1B TERM 1018 1008513 - 1008556 + F 100 -11.3 -4.71426 | opp_overlap 1008513, overlap 1008518 TTAATATGAAACAAA TACAACATCGTTTGTCGGT TTTAAT ACTGATAAACGATGTTTTA TTTTGTTAGTACCAC TERM 1019 1008556 - 1008513 - f 78 -6.9 -4.56883 | opp_overlap 1008513 1008518 TTAATATGAAACAAA TACAACATCGTTTGTCGGT TTTAAT ACTGATAAACGATGTTTTA TTTTGTTAGTACCAC TERM 1020 1008518 - 1008551 + F 100 -11.2 -5.28831 | opp_overlap 1008513, overlap 1008513 ATGAAACAAATACAA CATCGTTTGTCGGT TTTAAT ACTGATAAACGATG TTTTATTTTGTTAGT SAV0966 1008661 - 1012134 + | ATP-dependent nuclease subunit B SAV0967 1012138 - 1015791 + | ATP-dependent nuclease subunit A SAV0968 1015957 - 1016859 + | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxylase TERM 1021 1016875 - 1016902 + F 100 -9.3 -5.61689 | opp_overlap 1016875 1016874 TTATCATTTAAAAAG CTAACCAGTCT TTATAT AGATTGGTTAG TTTTTTCTTGCTTTT SAV0969 1017188 - 1017577 + | hypothetical protein TERM 1022 1017599 - 1017639 + T 100 -10.6 -5.32944 | gap 1, opp_overlap 1017585 1017598 1017601 AGACATATAGTATAT GACATAAGG-CATGGACAA TTAT TAGTCCAAGACCTTATGTC TTTTTTGATTCTAAA TERM 1023 1017697 - 1017675 - T 95 -7.1 -5.88197 | gap 1, overlap 1017679 TTAAACATAAAAAAA GGACTGGATA GTAG TA-CCAGTCC AAAATAATTCTAACC TERM 1024 1017732 - 1017747 + T 76 -6.2 -4.54343 | opp_overlap 1017731 CAATTAAGATTAGAT TGAATC GCAT GATTCA TTTATTTAGCTTTGT cdr 1019065 - 1017749 - | coenzyme A disulfide reductase SAV0971 1019941 - 1019117 - | alpha/beta hydrolase superfamily protein SAV0972 1020055 - 1020363 + | hypothetical protein SAV0973 1020452 - 1020360 - | hypothetical protein TERM 1025 1020385 - 1020403 + g 71 -9 -3.11072 | opp_overlap 1020388, overlap 1020388 CGTGCATTGCCTGTA GAATTTCT TTT AGAAATTC TCTGTGTTGGGTCCC TERM 1026 1020459 - 1020511 + H 79 -8 -4.28791 | gap 1, opp_overlap 1020462, overlap 1020462 ATAATTCATTGTGAA TAA-GCTCCCTTCAAAGTAGACATT GAAA AATGAAAATTTTGAAGGGAGCCTTA TTTATGTTCTAGGTT TERM 1027 1020462 - 1020507 + H 91 -11.3 -3.13947 | opp_overlap 1020462, overlap 1020459 ATTCATTGTGAATAA GCTCCCTTCAAAGTAGACATT GAAA AATGAAAATTTTGAAGGGAGC CTTATTTATGTTCTA TERM 1028 1020507 - 1020462 - H 81 -9.1 -3.63694 | opp_overlap 1020462 1020459 ATTCATTGTGAATAA GCTCCCTTCAAAGTAGACATT GAAA AATGAAAATTTTGAAGGGAGC CTTATTTATGTTCTA SAV0974 1020911 - 1022725 + | lipopolysaccharide modification acyltransferase TERM 1029 1022741 - 1022772 + F 100 -7.6 -5.7946 | gap 1, opp_overlap 1022741 CATATGTTTAATAAG TCTAGTTAATGTGTA ACG TA-ACATTAGCTAGA TTTTTTTATTCAAAA TERM 1030 1023555 - 1023524 - g 79 -5.3 -5.0925 | opp_overlap 1023528 TCGTAAAACTAAAAA CAAC-CCTGTGCTCA TTGG TGAAC-CAGGTGTTG GTAAAACTGCAATTG clpB 1022928 - 1025537 + | ClpB chaperone-like protein TERM 1031 1025575 - 1025545 - T 93 -11.3 -3.46236 | opp_overlap 1025545, overlap 1025540 ATGAATAAAATTGAA CCAAGAATGTGAT GATTA ATCGCATTCTTGG TTTTTTAGATTTGAA TERM 1032 1025545 - 1025575 + T 100 -13.5 -5.22039 | opp_overlap 1025545 1025540 ATGAATAAAATTGAA CCAAGAATGTGAT GATTA ATCGCATTCTTGG TTTTTTAGATTTGAA SAV0976 1026465 - 1025596 - | hypothetical protein TERM 1033 1025865 - 1025900 + g 80 -7.1 -4.5478 | TTAAAATATTATTTT TAAGTGATGACCA ATATTCTGGA TGGTTATCACTTA TTATTTTGTATTTTT TERM 1034 1026193 - 1026206 + g 74 -2.4 -5.53288 | opp_overlap 1026190 GACAACATTTAATTT CGAT TGAAAC ATCG TTTTTTTAAGTTGGA SAV0977 1026575 - 1027720 + | hypothetical protein SAV0978 1027704 - 1028345 + | hypothetical protein SAV0979 1028338 - 1029459 + | hypothetical protein SAV0980 1029437 - 1029952 + | hypothetical protein SAV0981 1030263 - 1030697 + | hypothetical protein TERM 1035 1030762 - 1030807 + T 90 -8.5 -4.94992 | opp_overlap 1030761 GATTATAATATAATT GCCTTGATACAAAGATTAC TCGTAAAT GACATCTTTGTATTAAGGC TTTTTCTAAATTTAA TERM 1036 1030912 - 1030893 - T 75 -4.2 -5.26119 | opp_overlap 1030893, overlap 1030888 TGGCCAAAAATAAAA GCCGCC TTTATCTG GGCAGC TTCAATAATAAGAAA SAV0982 1031139 - 1030954 - | hypothetical protein TERM 1037 1031309 - 1031289 - H 70 -5.5 -4.28361 | opp_overlap 1031293 TTAAGCGCATTAAAA CCAATTTCA TAC TGAAATTTG ACGATAATAAAGCAT fabH 1031434 - 1032375 + | 3-oxoacyl-(acyl carrier protein) synthase III SAV0984 1032387 - 1033631 + | 3-oxoacyl synthase TERM 1038 1033671 - 1033641 - T 93 -8.5 -5.01535 | opp_overlap 1033641 GCATAATTATAAAAA TCTTCAGTAAC GTTGTTTTA GTTACTGAAGA TTTTTTCTGTTTCTT TERM 1039 1033641 - 1033671 + T 95 -8.5 -5.61913 | opp_overlap 1033641 GCATAATTATAAAAA TCTTCAGTAAC GTTGTTTTA GTTACTGAAGA TTTTTTCTGTTTCTT SAV0985 1034057 - 1033686 - | hypothetical protein oppB 1034300 - 1035226 + | oligopeptide transport system permease protein SAV0987 1035226 - 1036296 + | oligopeptide transport system permease protein OppC oppD 1036312 - 1037394 + | oligopeptide transport system ATP-binding protein OppD-like protein oppF 1037384 - 1038325 + | oligopeptide transport system ATP-binding protein OppF-like protein SAV0990 1038344 - 1039999 + | peptide binding protein OppA TERM 1040 1040037 - 1040016 - f 72 -8.7 -2.90615 | opp_overlap 1040016, overlap 1040013 ATGCTTTGTAAATTA GGCTGGAGA CATA TCTCCAGTC TTTTTGTGTTGGATA TERM 1041 1040016 - 1040037 + F 100 -10.9 -5.10767 | opp_overlap 1040016 1040013 ATGCTTTGTAAATTA GGCTGGAGA CATA TCTCCAGTC TTTTTGTGTTGGATA TERM 1042 1040368 - 1040382 + G 82 -7.8 -4.52897 | opp_overlap 1040340 1040367 1040368 1040370 ATGTAGCATTAACAG CACCGC CAA GTGGTG TTTATTCTTCGTTAT TERM 1043 1041228 - 1041204 - g 71 -6.5 -4.2338 | opp_overlap 1041204, overlap 1041201 TATGAAGACAAAGAA TTACGTAAAGC AAT GCTTTATGCAA TTGATAGAGAAAAAT SAV0991 1040211 - 1041926 + | oligopeptide ABC transporter, oligopeptide-binding protein TERM 1044 1041954 - 1041935 - f 76 -9.3 -3.20901 | opp_overlap 1041935 AGCTTAGTAATGTAA CCTCGAC GATTTT GTCGAGG TTTACTTATATGGGG TERM 1045 1041935 - 1041954 + F 91 -10 -4.04174 | opp_overlap 1041935 AGCTTAGTAATGTAA CCTCGACG ATTT TGTCGAGG TTTACTTATATGGGG SAV0992 1041977 - 1042963 + | oligopeptide ABC transporter ATP-binding protein TERM 1046 1043418 - 1043400 - g 71 -9 -3.14878 | overlap 1043398 TGGCCTAAGTGAAGA TGCATATT ATA AATATGCA CATGAATTTTCAGGT appF 1042966 - 1043946 + | oligopeptide transport system ATP-binding protein AppF-like protein oppB 1043939 - 1044901 + | oligopeptide transport system permease protein SAV0995 1044913 - 1045794 + | oligopeptide ABC transporter permease TERM 1047 1045829 - 1045804 - T 100 -9.8 -5.00196 | opp_overlap 1045804 CGTTAAATAATAAAA GAGGCACTAG TTAATT CTAGTACCTC TTTATTTTATCTCTT TERM 1048 1045804 - 1045829 + T 88 -7.6 -4.87008 | opp_overlap 1045804 CGTTAAATAATAAAA GAGGCACTAG TTAATT CTAGTACCTC TTTATTTTATCTCTT trpS 1046825 - 1045836 - | tryptophanyl-tRNA synthetase TERM 1049 1046932 - 1046942 + H 75 -4 -5.29782 | opp_overlap 1046932 TTACTACTAACAAAG GATT AAT AATC TTTTTTATAAGTGTA spxA 1047119 - 1047514 + | transcriptional regulator Spx TERM 1050 1047559 - 1047582 + F 100 -12.6 -5.48054 | opp_overlap 1047563 TAAAAGATATGTCAA GCAACACTAT TTCT ATAGTGTTGC TTTTTTGGTTTTAAT SAV0998 1047885 - 1048604 + | adaptor protein TERM 1051 1048652 - 1048635 - f 76 -9.9 -2.87794 | opp_overlap 1048635, overlap 1048634 1048637 AACGCACTATGAAAG GAGACTC TTTG GAGTCTC TTTTTTTATTGATTT TERM 1052 1048635 - 1048652 + F 100 -9.9 -5.9003 | opp_overlap 1048635 1048634 1048637 AACGCACTATGAAAG GAGACTC TTTG GAGTCTC TTTTTTTATTGATTT SAV0999 1048725 - 1049711 + | transcription factor TERM 1053 1049995 - 1049984 - g 71 -3 -5.05228 | ACTAAATTAGAAAAA GTAT ATGT ATAC GCGCACCTAAAACAA TERM 1054 1050991 - 1051004 + G 77 -5.3 -4.87665 | CCAACCGTCAAATTC TAGTG ACTA CACTA TTTTTGTCGCTGAAG SAV1000 1049759 - 1051567 + | thimet oligopeptidase-like protein TERM 1055 1051738 - 1051759 + T 100 -10.2 -5.86465 | ATCCCCTTTGTTTAG CGTCGTGT ATTCAG ACACGACG TTTTTTTATGTTCTT TERM 1056 1051982 - 1052021 + T 70 -4.4 -4.88786 | gap 1, opp_overlap 1051987, overlap 1051987 AAATTAAGAGTCAGT AAAAAGACCTCGTTACATT TAT GGTGTA-CGAGGTCTTTAA TTTATTTATTTTGAT TERM 1057 1051987 - 1052016 + T 84 -8.7 -4.30977 | gap 1, opp_overlap 1051987, overlap 1051982 AAGAGTCAGTAAAAA GACCTCGTTACATT TAT GGTGTA-CGAGGTC TTTAATTTATTTATT TERM 1058 1052016 - 1051987 - T 82 -7.3 -4.76644 | gap 1, opp_overlap 1051987 1051982 AAGAGTCAGTAAAAA GACCTCGTTACA TTTATGG TGTA-CGAGGTC TTTAATTTATTTATT yjbM 1052812 - 1052027 - | hypothetical protein SAV1003 1053221 - 1052856 - | hypothetical protein TERM 1059 1053341 - 1053351 + r 78 -4 -5.4505 | TAATTTATATTGTTT GAAA GTG TTTC TTTTTTCTTGAAAAA SAV1004 1053918 - 1053325 - | hypothetical protein SAV1005 1054104 - 1054451 + | hypothetical protein SAV1006 1054468 - 1055103 + | GTP pyrophosphokinase ppnK 1055120 - 1055929 + | inorganic polyphosphate/ATP-NAD kinase TERM 1060 1056008 - 1056029 + G 100 -13.1 -4.09805 | opp_overlap 1056005 1056004 CTAAGAAGACAGTGA GCGCCATTA AAAA TAATGGCGC TTTAATTGTTAATGA SAV1008 1055926 - 1056780 + | hypothetical protein TERM 1061 1057556 - 1057575 + G 81 -8 -4.1585 | opp_overlap 1057535 AGAACATTTGCTTGG TATCATCA CGAT TGATGATA TTTTAGACGTTATGG TERM 1062 1057764 - 1057753 - g 71 -3 -5.07567 | GGAGATTTGAAAAAA CATT AGAA AATG TAGCGCTACTCGCAG SAV1009 1056801 - 1058186 + | Mg2 transporter SAV1010 1058196 - 1060040 + | Na+/H+ antiporter-like protein fabI 1060318 - 1061088 + | enoyl-(acyl carrier protein) reductase TERM 1063 1061101 - 1061134 + T 100 -9.1 -5.50313 | gap 1, opp_overlap 1061101 1061099, overlap 1061128 TAATATCATTCAACA GCTTTGTTCACGTTAT CAT AT-ATGTGAGCAAAGC TTTTTTGCTTTTATA TERM 1064 1061250 - 1061215 - T 100 -15.7 -5.64274 | opp_overlap 1061212 1061210 1061208 1061215 TTATGCACAAAAAAA TCTCCTCAAAAGCTG TAGTTT CAACTTTTGAGGAGA TAGTATCTTATATTC TERM 1065 1061215 - 1061250 + T 100 -13.5 -2.81055 | opp_overlap 1061215, overlap 1061212 1061210 1061208 TTATGCACAAAAAAA TCTCCTCAAAAGCTG TAGTTT CAACTTTTGAGGAGA TAGTATCTTATATTC SAV1012 1062370 - 1061285 - | hypothetical protein TERM 1066 1064176 - 1064164 - g 80 -6.3 -4.74598 | opp_overlap 1064163 1064164 GAAATTCAAAAGAAA CGTTT AGG AAACG GTTATAATGCAGTTT SAV1013 1062775 - 1064280 + | sodium/proton-dependent alanine carrier protein SAV1014 1064425 - 1065183 + | hypothetical protein SAV1015 1065377 - 1065886 + | hypothetical protein TERM 1067 1065931 - 1065974 + T 100 -19.4 -4.67048 | opp_overlap 1065931 1065936, overlap 1065936 TGTTTGAATTAATAA GAAAATGGTCATTTTTATTG AATG TAATAAAAATGACCATTTTC TTTATTTTAAAATAC TERM 1068 1065974 - 1065931 - T 100 -18.7 -3.81146 | opp_overlap 1065931 1065936, overlap 1065936 TGTTTGAATTAATAA GAAAATGGTCATTTTTATT GAATGT AATAAAAATGACCATTTTC TTTATTTTAAAATAC TERM 1069 1065969 - 1065936 - T 100 -12.8 -4.95167 | opp_overlap 1065931 1065936, overlap 1065931 GAATTAATAAGAAAA TGGTCATTTTTATT GAATGT AATAAAAATGACCA TTTTCTTTATTTTAA TERM 1070 1065936 - 1065969 + T 100 -13.5 -5.26247 | opp_overlap 1065936 1065931, overlap 1065931 GAATTAATAAGAAAA TGGTCATTTTTATTG AATG TAATAAAAATGACCA TTTTCTTTATTTTAA SAV1016 1067189 - 1065999 - | hypothetical protein TERM 1071 1066940 - 1066951 + g 73 -4.4 -4.84017 | CTAAAATAAATCCAG TCGT TAAA ACGA TTTTTGTGCCGAATT SAV1017 1068342 - 1067167 - | diacylglycerol glucosyltransferase murE 1068775 - 1070259 + | UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase SAV1019 1070249 - 1070500 + | hypothetical protein SAV1020 1070500 - 1070718 + | peptide chain release factor 3 SAV1021 1070905 - 1072107 + | peptide chain release factor 3 TERM 1072 1072340 - 1072367 + F 95 -8.5 -5.4182 | TAAATTGCTTAGTGA GACCTTTGCTA TTTATT TAGCATAGGTC TTTTTGTTTGTACTT SAV1022 1072409 - 1073212 + | toxic anion resistance protein TERM 1073 1073225 - 1073254 + F 100 -10.2 -5.04222 | TAATTGATGTGAAGC GGACAATCTTAA TTTAGT TTAAGGTTGTCC TTTTTCATTTAATTG TERM 1074 1074417 - 1074407 - g 73 -4 -5.16237 | opp_overlap 1074399 AACTTGATGAAAAAA TTCA TGT TGAA GATAAACATAAACAA htrA 1073446 - 1075755 + | serine protease HtrA SAV1024 1075772 - 1077130 + | Na+transporting ATP synthase TERM 1075 1077184 - 1077138 - f 79 -9.1 -3.46859 | gap 1, opp_overlap 1077138, overlap 1077136 TAGGATAATATAATA GCAATCTAAGTT-TAGTTAATA TAGA TTTTAACTGGAACTTAGATTGC TTTTTTAGTTTGTAT TERM 1076 1077138 - 1077184 + F 100 -11.3 -5.4387 | gap 1, opp_overlap 1077138 1077136 TAGGATAATATAATA GCAATCTAAGTT-TAGTTAATA TAGA TTTTAACTGGAACTTAGATTGC TTTTTTAGTTTGTAT SAV1025 1077266 - 1078780 + | nucleotidase TERM 1077 1078827 - 1078856 + T 91 -8.7 -4.7416 | opp_overlap 1078827 CAACAAGTATAAAAA CCTTTCTTAGAGA AGAT TATCTAGGAAAGG TTTTTAGAATTTTAA TERM 1078 1078856 - 1078827 - T 81 -6.5 -5.03945 | opp_overlap 1078827 CAACAAGTATAAAAA CCTTTCTTAGAGA AGAT TATCTAGGAAAGG TTTTTAGAATTTTAA TERM 1079 1078953 - 1078928 - T 100 -13.5 -5.72053 | opp_overlap 1078935 TAAGTAAACAAAAAA GCTAAAATGGT ATAT ACCATTTTAGC AAGTAACGGAAACGG SAV1026 1079835 - 1079266 - | competence transcription factor SAV1027 1080045 - 1080263 + | hypothetical protein TERM 1080 1080290 - 1080342 + T 79 -8.2 -3.93236 | opp_overlap 1080292 1080297, overlap 1080292 1080297 ATTCCATAACGCAAT C-ATAAAAGGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCCTTTAATCG TTTATGACATTAATC TERM 1081 1080339 - 1080292 - T 82 -11 -2.80511 | gap 1, opp_overlap 1080292 1080290 1080297, overlap 1080297 TCCATAACGCAATCA TAAAAGGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCCTTTAA TCGTTTATGACATTA TERM 1082 1080292 - 1080339 + T 83 -11 -3.02632 | gap 1, opp_overlap 1080292 1080297, overlap 1080290 1080297 TCCATAACGCAATCA TAAAAGGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCCTTTAA TCGTTTATGACATTA TERM 1083 1080334 - 1080297 - T 100 -10.9 -4.56093 | gap 1, opp_overlap 1080297 1080292 1080290, overlap 1080292 AACGCAATCATAAAA GGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCC TTTAATCGTTTATGA TERM 1084 1080297 - 1080334 + T 95 -10.9 -3.91197 | gap 1, opp_overlap 1080292 1080297, overlap 1080292 1080290 AACGCAATCATAAAA GGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCC TTTAATCGTTTATGA SAV1028 1081330 - 1080344 - | lipoate-protein ligase-like protein TERM 1085 1081620 - 1081596 - g 95 -8.7 -5.00616 | opp_overlap 1081600 1081603 1081614 GTCGTGTTGAAAAAA TCAACGATAAC TCT GTTATTGTTGA CTTAACAATTATGGA SAV1029 1081529 - 1081705 + | hypothetical protein SAV1030 1081720 - 1082322 + | hypothetical protein TERM 1086 1082359 - 1082327 - f 86 -9.4 -3.94 | opp_overlap 1082317 1082327, overlap 1082358 TTAATGCTTAAATAA GCTTTTCTTAGA CGTCTGTGT TCTAAGAAAAGC TTTTTGCTTTAGAAA TERM 1087 1082327 - 1082359 + F 100 -9.4 -4.98531 | gap 1, opp_overlap 1082327 1082358, overlap 1082317 TTAATGCTTAAATAA GCTTTTCTTAG-ACG TCTG TGTTCTAAGAAAAGC TTTTTGCTTTAGAAA SAV1031 1082531 - 1082692 + | hypothetical protein TERM 1088 1082735 - 1082697 - f 78 -3.2 -5.5604 | TTAAGCAATAAAAAA TAACCATCATTTCAAAAC TTT GACATAGAATGATGGTTA AAGAAAATCTCATTT TERM 1089 1082779 - 1082802 + F 100 -9.6 -4.93595 | TTAACGGGCTCATTA GGCGACATGT TCCT GCATGTCGTC TTTTTACATTTTTAT SAV1032 1083349 - 1083621 + | hypothetical protein TERM 1090 1084295 - 1084275 - g 93 -8.5 -4.66002 | overlap 1084285 CATTAAGAAAAATAA TTTTTGAAA ATT TTTCAAAAA AATGCACGTATTGGG SAV1033 1083665 - 1085629 + | hypothetical protein SAV1034 1085632 - 1085952 + | hypothetical protein SAV1035 1085949 - 1086590 + | ABC transporter ATP-binding protein TERM 1091 1086663 - 1086607 - T 100 -11.2 -4.90471 | gap 1, opp_overlap 1086608 1086613, overlap 1086608 ATCCAAAAGATAAAA TTAAAAGCCAATCAATGGGAAATGTTG ACTT CAACA-CTCCGTTTGATTGGCTTTTAT AATGTGTTACTAAGT TERM 1092 1086662 - 1086608 - T 100 -14.7 -3.52656 | gap 1, opp_overlap 1086608 1086613, overlap 1086607 TCCAAAAGATAAAAT TAAAAGCCAATCAATGGGAAATGTTG ACTT CAACA-CTCCGTTTGATTGGCTTTTA TAATGTGTTACTAAG TERM 1093 1086608 - 1086662 + T 100 -12.5 -2.77148 | gap 1, opp_overlap 1086608 1086607, overlap 1086613 TCCAAAAGATAAAAT TAAAAGCCAATCAATGGGAAATGTTG ACTT CAACACT-CCGTTTGATTGGCTTTTA TAATGTGTTACTAAG TERM 1094 1086613 - 1086657 + T 83 -8 -4.5477 | gap 1, opp_overlap 1086608 1086607, overlap 1086608 AAGATAAAATTAAAA GCCAATCAATGGGAAATGTTG ACTT CAACACT-CCGTTTGATTGGC TTTTATAATGTGTTA SAV1036 1086923 - 1086678 - | hypothetical protein TERM 1095 1087256 - 1087281 + r 100 -11.3 -4.60487 | opp_overlap 1087256 AGCTAAATGAAAAAA TCCTAGGTATT CATG AGTACCTAGGA TTTTTACGCATGATA TERM 1096 1087281 - 1087256 - R 100 -9.1 -5.38497 | opp_overlap 1087256 AGCTAAATGAAAAAA TCCTAGGTATT CATG AGTACCTAGGA TTTTTACGCATGATA TERM 1097 1087325 - 1087309 - R 100 -10.9 -5.77988 | ATATATACAAAAAAA GAGAGGA TAG TCCTCTC AAATAATAGTTAATA SAV1037 1087691 - 1087335 - | hypothetical protein SAV1038 1088179 - 1089138 + | ferrichrome ABC transporter TERM 1098 1089180 - 1089142 - T 100 -11.8 -5.56372 | opp_overlap 1089142 AAAGCAAAATAAAAA TACAGCGCTACTCGTAAA TCA TATAAGAGTGGCGCTGTA TTTTTAATTATGTTT TERM 1099 1089142 - 1089180 + T 100 -14 -5.00412 | opp_overlap 1089142 AAAGCAAAATAAAAA TACAGCGCTACTCGTAAA TCA TATAAGAGTGGCGCTGTA TTTTTAATTATGTTT SAV1039 1089594 - 1089379 - | hypothetical protein SAV1040 1089759 - 1090310 + | hypothetical protein TERM 1100 1090346 - 1090316 - T 85 -2.6 -5.95539 | gap 1, opp_overlap 1090316, overlap 1090317 TGTTAAATAAAAAAA CTCGACAGTTCGA TGTAAG TCGAT-TGCCGAG TAGTATCATTTTCTA SAV1041 1091300 - 1090362 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 1101 1092206 - 1092223 + G 88 -7.1 -5.07652 | opp_overlap 1092199, overlap 1092200 GTTATATATTCTTGT TAGAATC ACAA GATTCTA TTTTCTTTTCACAAA SAV1042 1091482 - 1092843 + | putative menaquinone-specific isochorismate TERM 1102 1093979 - 1093965 - g 70 -4.3 -4.731 | AATTGATTAAGAAAA CATCT GAAAA AGATG CATTATTTATTAGTA menD 1092830 - 1094503 + | menaquinone biosynthesis protein TERM 1103 1095023 - 1095009 - g 77 -8.6 -3.58565 | overlap 1095003 CAAATAAGACTACAA CGATTG TCT CAATCG CCACAGAAAATGGCC SAV1044 1094490 - 1095293 + | prolyl aminopeptidase menB 1095286 - 1096107 + | naphthoate synthase TERM 1104 1096130 - 1096164 + T 95 -6.5 -5.86976 | gap 1 TGAATATGATATTAA GTCACTTG-CGTCGTT TATT AGCGACGATAGGTGGC TTTTTTATTTTATAA TERM 1105 1096316 - 1096283 - T 100 -9.6 -5.33848 | opp_overlap 1096282 1096283 ATTACAATGAAAAAA CGAGCTGGTGAGAA ATTGAA TTCTCGCCAACCCG CTTTATGAAGTGAAA sspC 1096674 - 1096345 - | cysteine protease sspB 1097893 - 1096712 - | cysteine protease precursor TERM 1106 1097305 - 1097325 + g 71 -3.3 -5.18409 | overlap 1097296 1097306 ACTCTTGTTTCAATT TTGCTGAAA CTG TTTTAGCAC TTTCTTTTTCTTTTA TERM 1107 1097584 - 1097602 + g 77 -9 -3.65314 | CGTCTTTTATAACTG GATAATAG TAA CTATTATC TTCTTCACCATTAAA TERM 1108 1097685 - 1097722 + g 70 -4.3 -4.77757 | gap 1, overlap 1097687 CTTTGTTTATCTAAT GCTTTAGCATAACCAGCA AAT TGTT-GTTGTGCTAGATC TTTTACTTTTTGAGG sspA 1099003 - 1097975 - | serine protease TERM 1109 1098625 - 1098649 + g 70 -4.4 -4.67607 | gap 2, overlap 1098628 TTAAAGCATGAGGAT CACCGTGCGTAG CAT CTACG-ACG-TG TTTATTTGTTAAAAG TERM 1110 1098628 - 1098647 + g 73 -7.2 -3.94772 | gap 1, overlap 1098625 AAGCATGAGGATCAC CGTGCGTAG CAT CTACG-ACG TGTTTATTTGTTAAA TERM 1111 1099119 - 1099090 - R 83 -6.7 -5.13137 | TAAATAAATTAAAAA GTTTTTGTAAA GATTAGAG TTTACAAAAAC ATTAAGGTAATTAAA SAV1049 1100685 - 1099531 - | HisC-like protein TERM 1112 1099638 - 1099615 - G 79 -8.2 -3.91072 | GGAAATCCTTACAAA TCCTTTACCG AATT CTGTAAAGGA TGAGCCTGGAACGAT SAV1050 1101891 - 1100881 - | hypothetical protein TERM 1113 1101658 - 1101674 + g 70 -2.3 -5.28778 | overlap 1101660 1101667 TATCATATAAGGTAC TATCAAA CGT TTTGAAA TTTTTTCTAAATAGT SAV1051 1102044 - 1102463 + | ATL autolysin transcription regulator TERM 1114 1102586 - 1102532 - T 100 -16.1 -3.55145 | opp_overlap 1102532 1102539, overlap 1102538 AATCATGAATTACAA GCAAAAGTAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTATTTTTGC TTGTGTATGTATAAA TERM 1115 1102532 - 1102586 + T 100 -18.3 -3.66896 | opp_overlap 1102532 1102538, overlap 1102539 AATCATGAATTACAA GCAAAAGTAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTATTTTTGC TTGTGTATGTATAAA TERM 1116 1102580 - 1102538 - T 83 -7.9 -4.52781 | opp_overlap 1102532 1102539, overlap 1102532 GAATTACAAGCAAAA GTAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTAT TTTTGCTTGTGTATG TERM 1117 1102539 - 1102579 + T 100 -11.4 -4.9755 | opp_overlap 1102538 1102532, overlap 1102532 AATTACAAGCAAAAG TAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTA TTTTTGCTTGTGTAT TERM 1118 1102602 - 1102659 + T 100 -16.5 -3.4382 | opp_overlap 1102605 1102606, overlap 1102604 1102606 1102615 TTGTGTATGTATAAA AAAGGGATCAAAGGTCATCCCCCATGA TTGA TAGTGGGGGATGACTTTTGATCCTATG TTCATGTTGCTTATT TERM 1119 1102604 - 1102657 + T 100 -19.1 -3.27602 | opp_overlap 1102605 1102606, overlap 1102602 1102606 1102615 GTGTATGTATAAAAA AGGGATCAAAGGTCATCCCCCATGA TTGA TAGTGGGGGATGACTTTTGATCCTA TGTTCATGTTGCTTA TERM 1120 1102656 - 1102605 - T 100 -16.1 -5.28176 | opp_overlap 1102604 1102602 1102606 1102615, overlap 1102606 TGTATGTATAAAAAA GGGATCAAAGGTCATCCCCCA TGATTGATAG TGGGGGATGACTTTTGATCCT ATGTTCATGTTGCTT TERM 1121 1102606 - 1102655 + T 100 -23.9 -3.1917 | opp_overlap 1102605 1102606, overlap 1102604 1102602 1102615 GTATGTATAAAAAAG GGATCAAAGGTCATCCCCCATGA TTGA TAGTGGGGGATGACTTTTGATCC TATGTTCATGTTGCT TERM 1122 1102655 - 1102606 - T 100 -19.6 -3.76182 | opp_overlap 1102606 1102604 1102602 1102615, overlap 1102605 GTATGTATAAAAAAG GGATCAAAGGTCATCCCCCA TGATTGATAG TGGGGGATGACTTTTGATCC TATGTTCATGTTGCT TERM 1123 1102615 - 1102646 + T 100 -13.8 -4.34947 | opp_overlap 1102606 1102605, overlap 1102606 1102604 1102602 AAAAAGGGATCAAAG GTCATCCCCCATGA TTGA TAGTGGGGGATGAC TTTTGATCCTATGTT SAV1052 1106416 - 1102670 - | partial autolysin TERM 1124 1104315 - 1104343 + g 81 -7.5 -4.41956 | opp_overlap 1104309, overlap 1104318 TGTTTATAAGTGCCC CAAGGTACTGAAT ATA ATTTAGTGCCTGG TTTTACTGTATATGT SAV1054 1107078 - 1106644 - | acetyl transferase TERM 1125 1107174 - 1107223 + r 100 -12.5 -3.84271 | opp_overlap 1107181 1107220, overlap 1107178 1107181 1107189 1107220 AAAAATAATTAGACA TAAAAAAGCTATAAAGATGATTC ACAA GAATCATCTTTATAGCTAATTAA TTATTAATGTTATAG TERM 1126 1107178 - 1107219 + r 100 -13.3 -3.57816 | opp_overlap 1107181, overlap 1107174 1107181 1107189 ATAATTAGACATAAA AAAGCTATAAAGATGATTC ACAA GAATCATCTTTATAGCTAA TTAATTATTAATGTT TERM 1127 1107216 - 1107181 - R 100 -19.4 -5.43414 | opp_overlap 1107181 1107178 1107174 1107189 ATTAGACATAAAAAA GCTATAAAGATGATTC ACAA GAATCATCTTTATAGC TAATTAATTATTAAT TERM 1128 1107181 - 1107216 + r 100 -19.4 -2.90373 | opp_overlap 1107181, overlap 1107178 1107174 1107189 ATTAGACATAAAAAA GCTATAAAGATGATTC ACAA GAATCATCTTTATAGC TAATTAATTATTAAT TERM 1129 1107189 - 1107208 + r 86 -9.4 -3.95153 | opp_overlap 1107181, overlap 1107181 1107178 1107174 TAAAAAAGCTATAAA GATGATTC ACAA GAATCATC TTTATAGCTAATTAA SAV1055 1107703 - 1107233 - | hypothetical protein SAV1056 1108968 - 1107751 - | hypothetical protein fmt 1109419 - 1110612 + | autolysis and methicillin resistant-related protein TERM 1130 1111121 - 1111098 - T 100 -14 -5.54338 | opp_overlap 1111093 1111101 GAAGGAAAATAAAAA CCAGCTAACA AAAG TGTTAGCTGG TTAAACTTTACATTA SAV1058 1111439 - 1111149 - | putative quinol oxidase polypeptide IV QoxD qoxC 1112041 - 1111436 - | quinol oxidase polypeptide III qoxB 1114019 - 1112031 - | quinol oxidase polypeptide I TERM 1131 1113691 - 1113681 - G 74 -6.8 -4.42594 | TAAACCAAAGATAAA TGGC ATT GCCA TGAAGATAATCATGA SAV1061 1115119 - 1114019 - | quinol oxidase polypeptide II QoxA TERM 1132 1114675 - 1114704 + g 77 -9.5 -3.16338 | overlap 1114673 1114672 CGACAGGACGATCTT TAGGGATTGTTAA TGTA TTAACAGTCTCTA TATGTTCATCTGGAT TERM 1133 1114955 - 1114942 - G 76 -3.8 -5.27938 | ACTTGTAAATAAAAA TGGC GAACAT GCCA AGTACAACGAAACAA TERM 1134 1115672 - 1115626 - R 100 -13.5 -3.65581 | gap 1, opp_overlap 1115630 1115635, overlap 1115630 1115635 ATGAAGTTGGAATAA CAAATAAAATGGTAGCAAAACA TGTT CGTT-TGCTACCATTTTATTTA CAGTATAGTGATGAG TERM 1135 1115668 - 1115630 - R 100 -12.1 -4.45068 | gap 1, opp_overlap 1115630 1115635, overlap 1115626 1115635 AGTTGGAATAACAAA TAAAATGGTAGCAAAACA TGTT CGTT-TGCTACCATTTTA TTTACAGTATAGTGA TERM 1136 1115630 - 1115668 + r 95 -12.1 -3.64599 | opp_overlap 1115630 1115626 1115635, overlap 1115635 AGTTGGAATAACAAA TAAAATGGTAGCAAA ACATGTTCG TTTGCTACCATTTTA TTTACAGTATAGTGA TERM 1137 1115635 - 1115663 + r 88 -7.6 -4.89521 | opp_overlap 1115635 1115630 1115626, overlap 1115630 GAATAACAAATAAAA TGGTAGCAAA ACATGTTCG TTTGCTACCA TTTTATTTACAGTAT TERM 1138 1115663 - 1115635 - R 90 -7.6 -5.18297 | gap 1, opp_overlap 1115630 1115635, overlap 1115630 1115626 GAATAACAAATAAAA TGGTAGCAAAACA TGTT CGTT-TGCTACCA TTTTATTTACAGTAT SAV1062 1116007 - 1115690 - | hypothetical protein TERM 1139 1116434 - 1116450 + r 79 -8 -4.20367 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTTTGTTGGGGCC TERM 1140 1116498 - 1116486 - R 71 -7.7 -3.46167 | opp_overlap 1116486, overlap 1116485 CTATAATTGAAAAAT GCTTG TTA CAAGC TTATTTTCATTCAAT TERM 1141 1116486 - 1116498 + r 79 -7.7 -4.33004 | opp_overlap 1116486 1116485 CTATAATTGAAAAAT GCTTG TTA CAAGC TTATTTTCATTCAAT TERM 1142 1116612 - 1116554 - R 100 -12.7 -3.27389 | opp_overlap 1116554 1116559, overlap 1116559 GAGCCAAGAACAAAG TGAAATGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCATTTGA TCGATTAATGTCCCA TERM 1143 1116554 - 1116612 + r 78 -10.5 -2.58714 | opp_overlap 1116554 1116559, overlap 1116559 GAGCCAAGAACAAAG TGAAATGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCATTTGA TCGATTAATGTCCCA TERM 1144 1116607 - 1116559 - R 100 -12.6 -3.95772 | opp_overlap 1116554 1116559, overlap 1116554 AAGAACAAAGTGAAA TGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCA TTTGATCGATTAATG TERM 1145 1116559 - 1116607 + r 89 -10.4 -3.80114 | opp_overlap 1116559 1116554, overlap 1116554 AAGAACAAAGTGAAA TGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCA TTTGATCGATTAATG TERM 1146 1116797 - 1116785 - R 90 -7.7 -5.1925 | opp_overlap 1116784 CTAGAATTGAAAAAA GCTTG TTA CAAGC GAATTTTCGTTCAGT folD 1117731 - 1116871 - | FolD bifunctional protein SAV1064 1117932 - 1118414 + | putative phosphoribosylaminoimidazole carboxylase TERM 1147 1119138 - 1119162 + G 72 -2.9 -5.28778 | TATCCAATCGATTCA TTTCATTGGAA CAT TTACAGTGGAA TTTTTTATAGATAGT purK 1118401 - 1119525 + | phosphoribosylaminoimidazole carboxylase ATPase subunit purC 1119529 - 1120233 + | phosphoribosylaminoimidazole-succinocarboxamide synthase SAV1067 1120233 - 1120496 + | hypothetical protein TERM 1148 1121075 - 1121059 - g 81 -10.9 -2.61341 | overlap 1121055 GAAAAAGGCAATGTA TGTGGCA TGA TGCCACA TCCTGAAAGAGCTTT purQ 1120498 - 1121169 + | phosphoribosylformylglycinamidine synthase I TERM 1149 1122699 - 1122681 - g 95 -9 -4.8743 | opp_overlap 1122685, overlap 1122691 CTGAAAAGAAAGAAA TCTATCAA CAG TTGATAGA TTCAACGAAAGGTAT purL 1121162 - 1123351 + | phosphoribosylformylglycinamidine synthase II purF 1123330 - 1124814 + | amidophosphoribosyltransferase purM 1124807 - 1125835 + | phosphoribosylaminoimidazole synthetase purN 1125838 - 1126404 + | phosphoribosylglycinamide formyltransferase TERM 1150 1127199 - 1127184 - g 71 -7.6 -3.53444 | opp_overlap 1127183 1127184 1127186 GCAGTTGCGGTTAAA CACATG AATC CATGTG GTGTTGGTATCGGTG purH 1126416 - 1127897 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purD 1128027 - 1129166 + | phosphoribosylamine--glycine ligase TERM 1151 1129192 - 1129230 + T 82 -6.3 -5.32944 | gap 1, opp_overlap 1129192 1129205, overlap 1129205 AAAATACTAAGATTA GCTATGA-AGAAATCTAT AACG ATAGTTTTTTTTCATAGC TTTTTTAGTTGTAGA TERM 1152 1129205 - 1129216 + T 86 -3 -5.86965 | opp_overlap 1129205 1129192, overlap 1129192 TAGCTATGAAGAAAT CTAT AACG ATAG TTTTTTTTCATAGCT TERM 1153 1129301 - 1129351 + T 72 -4.9 -4.97158 | gap 1, opp_overlap 1129301 ATATGTAATACAAAA GAGGCGCCAC-AACATGTTT GGATGAACAAAA TAACATGTTTGTGGCACCTC TTTTGTTTAGTATGG TERM 1154 1129351 - 1129301 - T 82 -7.1 -4.69326 | gap 1, opp_overlap 1129301 ATATGTAATACAAAA GAGGCGCCAC-AACATGTTT GGATGAACAAAA TAACATGTTTGTGGCACCTC TTTTGTTTAGTATGG SAV1075 1130240 - 1129434 - | hypothetical protein TERM 1155 1129701 - 1129723 + g 80 -7.1 -4.61231 | gap 1 CCCTCTATAATTTGC TGCGTCTATC ATCT GATAG-CGCA TTTTTAAAGATCTGC SAV1076 1131633 - 1130233 - | cation ABC transporter TERM 1156 1130731 - 1130711 - G 71 -6.3 -4.11216 | opp_overlap 1130722, overlap 1130715 CGCTGATTTTCAAAA TAAACATCA CCT TGATATTTA ATCAATTGCATAATT SAV1077 1132223 - 1131648 - | hypothetical protein TERM 1157 1132276 - 1132248 - R 100 -10.3 -5.7946 | CTCCTAATAAAAAAA CGCACAACCATCC ATA GGAAAGTTATGCG TTCACAATATATATT SAV1078 1133053 - 1132604 - | hypothetical protein TERM 1158 1133016 - 1133000 - G 73 -8.7 -3.29958 | overlap 1132998 GGAAGAAGAGGAACA CATGCGC CGA GCACATG CATAAAAGCCCCTAA TERM 1159 1133052 - 1133024 - G 100 -10.3 -4.45485 | opp_overlap 1133024 1133025, overlap 1133025 AGCACATGCATAAAA GCCCCTAACAACT AAA AGTTGTAAGGGGA TTTAAATTAATTTAG TERM 1160 1133024 - 1133052 + g 87 -10.3 -3.83214 | opp_overlap 1133024 1133025, overlap 1133025 AGCACATGCATAAAA GCCCCTAACAACT AAA AGTTGTAAGGGGA TTTAAATTAATTTAG TERM 1161 1133051 - 1133025 - G 93 -13.8 -3.26568 | opp_overlap 1133024 1133025, overlap 1133024 GCACATGCATAAAAG CCCCTAACAACT AAA AGTTGTAAGGGG ATTTAAATTAATTTA TERM 1162 1133025 - 1133051 + g 89 -13.8 -2.89205 | opp_overlap 1133025 1133024, overlap 1133024 GCACATGCATAAAAG CCCCTAACAACT AAA AGTTGTAAGGGG ATTTAAATTAATTTA SAV1079 1133193 - 1133059 - | hypothetical protein TERM 1163 1133651 - 1133662 + G 74 -3 -5.2204 | ATTAAGTATGACTAT GATA TTTC TATC TTTTTCTTAGTTATC SAV1080 1133345 - 1134640 + | hypothetical protein SAV1081 1135065 - 1136237 + | hypothetical protein SAV1082 1136291 - 1136833 + | hypothetical protein TERM 1164 1136847 - 1136861 + F 77 -7.2 -4.25104 | opp_overlap 1136846 AGGTGCTATAATAGT TTTGCA ATT TGCAAA TTTTACTGAAACCGG ptsH 1136987 - 1137253 + | phosphocarrier protein HPr TERM 1165 1137576 - 1137552 - g 100 -13.7 -4.80167 | GATTAAAAATGAAAA CGCTAATGCTG CTA CAGCATTAACG GATGTAACAACACAA TERM 1166 1138511 - 1138497 - g 76 -2.8 -5.44638 | AGAAGAAAAAGAAAA CCTTAA AAA TGAAGG TCATGACATTTCGGA ptsI 1137256 - 1138974 + | phosphoenolpyruvate-protein phosphatase TERM 1167 1139005 - 1139049 + T 100 -12.4 -5.43621 | opp_overlap 1139008, overlap 1139008 GACAGAATTATAAAT AAACCCGAAGTATTCATTGT GAGTA ATTATGAATACTTCGGGTTC TTTTTTATGATTTAT TERM 1168 1139046 - 1139008 - T 100 -12 -4.63526 | opp_overlap 1139008 1139005 AGAATTATAAATAAA CCCGAAGTATTCAT TGTGAGTAATT ATGAATACTTCGGG TTCTTTTTTATGATT TERM 1169 1139008 - 1139046 + T 100 -14.1 -4.75967 | opp_overlap 1139008, overlap 1139005 AGAATTATAAATAAA CCCGAAGTATTCATTGT GAGTA ATTATGAATACTTCGGG TTCTTTTTTATGATT SAV1085 1139444 - 1139211 - | putative NrdH-redoxin SAV1086 1139642 - 1141003 + | cytochrome D ubiquinol oxidase subunit 1-like protein SAV1087 1141000 - 1142019 + | cytochrome D ubiquinol oxidase subunit II-like protein SAV1088 1142152 - 1142814 + | pottasium uptake protein KtrA TERM 1170 1142908 - 1142896 - T 90 -7.7 -5.1925 | opp_overlap 1142895 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SAV1089 1144757 - 1143060 - | hypothetical protein SAV1090 1144927 - 1144757 - | hypothetical protein TERM 1171 1145153 - 1145136 - R 72 -4.2 -5.0538 | GTTCATTTTAAAAAA TTAGTG AAATAA CACTAA AATTTCAGTTAAATC TERM 1172 1145432 - 1145406 - R 86 -7.4 -5.18726 | opp_overlap 1145406 GTTGTACAAGAAAAA GCTTAGGACA TCATATT TATCCTAAGC TTTGATAATTAGTAA def 1146008 - 1145457 - | peptide deformylase SAV1092 1146373 - 1146999 + | hypothetical protein TERM 1173 1147735 - 1147761 + G 84 -8 -4.56133 | opp_overlap 1147734 ACGAAGGTATTAACT TTGCAGCAGCTT ATA AAGCACCTGCAA TTTTCGTTATTCAAA pdhA 1147170 - 1148282 + | pyruvate dehydrogenase E1 component alpha subunit TERM 1174 1149219 - 1149203 - g 89 -9.5 -4.19953 | CACTCAAGCTGAAAA TGTTTGG TTA CCAAACA AAAATGACATCATCG phdB 1148286 - 1149263 + | pyruvate dehydrogenase E1 component beta subunit TERM 1175 1149854 - 1149842 - g 73 -7.7 -3.72141 | AGATGCATACTTAAA TGGTG GTG CACCA ACAGCTTCAAATGAA TERM 1176 1149927 - 1149907 - g 82 -9.7 -3.56366 | opp_overlap 1149907, overlap 1149894 1149890 1149897 AAGAAGTTGCTGAAA CTCCTGCAG CAC CTGCAGCAG TATCATTAGAAGGCG TERM 1177 1149907 - 1149927 + G 76 -9.7 -2.90075 | opp_overlap 1149894 1149890 1149897 1149907 AAGAAGTTGCTGAAA CTCCTGCAG CAC CTGCAGCAG TATCATTAGAAGGCG pdhC 1149354 - 1150646 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1178 1151087 - 1151075 - g 80 -6.3 -4.69622 | ATACAACTTTAAAAA TGCAA TCA TTGCA ACAGGTTCAAGACCA pdhD 1150650 - 1152056 + | dihydrolipoamide dehydrogenase TERM 1179 1152110 - 1152091 - f 79 -7.8 -4.28548 | opp_overlap 1152091 ATTCAGTCATTAAAA GCTGTAGC ATAT GCTACGGC TTTTTTGTTTTAGGT TERM 1180 1152091 - 1152110 + F 100 -10 -5.80951 | opp_overlap 1152091 ATTCAGTCATTAAAA GCTGTAGC ATAT GCTACGGC TTTTTTGTTTTAGGT SAV1097 1152224 - 1152499 + | hypothetical protein SAV1098 1152643 - 1153182 + | Cro/CI family transcriptional regulator protein potA 1153195 - 1154289 + | spermidine/putrescine ABC transporter potB 1154282 - 1155079 + | spermidine/putrescine ABC transporter TERM 1181 1155640 - 1155656 + G 80 -7.3 -4.59993 | ATTCCTAATATTTTA CCTTCTA TTA TAGGAGG TTTCTTTATGGCTTT potC 1155085 - 1155894 + | spermidine/putrescine ABC transporter potD 1155894 - 1156967 + | spermidine/putrescine-binding protein precursor-like protein SAV1103 1157041 - 1158060 + | hypothetical protein TERM 1182 1158073 - 1158113 + F 100 -14.3 -4.98522 | opp_overlap 1158073 TAAATATTGATGATA CCCAGATTAGTAAGTAGAG GTC TTTTGCTTATTAATCTGGG TTTTTATATGAGGTT SAV1104 1158343 - 1158762 + | hypothetical protein TERM 1183 1158782 - 1158832 + T 73 -3.7 -5.29885 | gap 2, opp_overlap 1158782 TTCATAGCAAAAAAA CCATTAAAATGTTAAGTTGTTAATT ATT AGATA-CAACC-AACATTTTAATGG TTTTATTTTTAACTT TERM 1184 1158832 - 1158782 - T 88 -5.9 -5.58454 | gap 1, opp_overlap 1158782 TTCATAGCAAAAAAA CCATTAAAATGTTAAGTTGT TAATTATTAGAT ACAACC-AACATTTTAATGG TTTTATTTTTAACTT SAV1105 1160193 - 1158841 - | Mn2+transport protein TERM 1185 1160243 - 1160258 + r 80 -6.2 -4.88646 | opp_overlap 1160236 1160243 1160242 TAACCTAATAAAATG TTTAGG TCAA CCTAAA TTTATTTTAATTTTT TERM 1186 1160323 - 1160358 + r 90 -9.8 -3.90922 | opp_overlap 1160325, overlap 1160325 TTAATATTAAGAAAA AAGAGCACGAAATCAT GGAT GTGATTACGTGCTCTA TTATTTAAACAAAGT TERM 1187 1160356 - 1160325 - R 100 -11.7 -5.54885 | opp_overlap 1160323 1160325 AATATTAAGAAAAAA GAGCACGAAATCA TGGATG TGATTACGTGCTC TATTATTTAAACAAA TERM 1188 1160325 - 1160356 + r 100 -12.4 -3.54488 | opp_overlap 1160325, overlap 1160323 AATATTAAGAAAAAA GAGCACGAAATCAT GGAT GTGATTACGTGCTC TATTATTTAAACAAA SAV1106 1160991 - 1160377 - | hypothetical protein SAV1107 1161148 - 1161975 + | myo-inositol-1(or 4)-monophosphatase-like protein TERM 1189 1161980 - 1162029 + T 82 -11.1 -2.55544 | gap 1, opp_overlap 1161976 1161985, overlap 1161985 AATCAAAATAATTAC CAAAAGCGTAATATGTAGTCCTAA CAA TTAGG-TAACATATTACGCTTTTA TACCTTAAATAATAA TERM 1190 1162024 - 1161985 - T 88 -8.8 -4.40037 | gap 1, opp_overlap 1161980 1161985, overlap 1161976 AAATAATTACCAAAA GCGTAATATGTAGTCCTAA CAA TTAGGTA-ACATATTACGC TTTTATACCTTAAAT TERM 1191 1161985 - 1162024 + T 100 -11 -4.47551 | gap 1, opp_overlap 1161985 1161976, overlap 1161980 AAATAATTACCAAAA GCGTAATATGTAGTCCTAA CAA TTAGG-TAACATATTACGC TTTTATACCTTAAAT TERM 1192 1162088 - 1162074 - T 71 -7.2 -3.77014 | opp_overlap 1162074 ATAAAACCATTTAAA TGTTCA TAA TGAACA TGTGTGGTCTTAAAT SAV1108 1162320 - 1162129 - | hypothetical protein TERM 1193 1163181 - 1163201 + G 73 -7.7 -3.75332 | GTGAAAAACTTCCGT GTAACTAAA ATC TTTGGTTAC TTTGGATTAAAACGT SAV1109 1162422 - 1164269 + | GTP-binding elongation factor-like protein TERM 1194 1164323 - 1164280 - T 77 -8.3 -3.73359 | opp_overlap 1164285, overlap 1164285 AATAATTTAACATAA TAAAAGAGAAGCTGAGCGA TGAAAG TTGCTTAGCTTCTCTTTTG GCATATAATATTTGA TERM 1195 1164285 - 1164318 + T 100 -13.3 -4.17657 | opp_overlap 1164280 1164285 TTTAACATAATAAAA GAGAAGCTGAGCGAT GAAA GTTGCTTAGCTTCTC TTTTGGCATATAATA TERM 1196 1164318 - 1164285 - T 90 -8.2 -4.90381 | opp_overlap 1164285, overlap 1164280 TTTAACATAATAAAA GAGAAGCTGAGCGA TGAAAG TTGCTTAGCTTCTC TTTTGGCATATAATA SAV1110 1164576 - 1164409 - | hypothetical protein SAV1111 1165060 - 1164578 - | hypothetical protein SAV1112 1165201 - 1165476 + | hypothetical protein TERM 1197 1165557 - 1165613 + F 70 -8.2 -3.08314 | overlap 1165561 1165566 TTTATAGTTTAATTA CTGATTAAAGTGGCTGTTATGTTGTC TTCTT GATGACATGTCAGTCACTTTTATTGG GTTTTAGCAATTCAC TERM 1198 1165566 - 1165604 + F 82 -7.5 -4.77719 | overlap 1165561 1165557 TAATTACTGATTAAA GTGGCTGTTATGTTGTC TTCTT GATGACATGTCAGTCAC TTTTATTGGGTTTTA SAV1113 1165895 - 1167016 + | hypothetical protein TERM 1199 1167124 - 1167156 + F 88 -5.7 -5.52079 | opp_overlap 1167124 1167128 GATGAGTTCAATAAC GGAAGTTAGGC AACCAAACAAC GCTTAACTTCC TTTTTGTTTTGATAT TERM 1200 1168067 - 1168053 - g 70 -7.1 -3.84246 | CCGCTAATGATTAAA GCCAC AAGTG GTGGC GGCGGTAAAGGTATG pycA 1167570 - 1171022 + | pyruvate carboxylase TERM 1201 1171075 - 1171034 - T 100 -12.5 -4.42667 | opp_overlap 1171039, overlap 1171039 CTAAAATGATTAAAA TAAAACGAGATTACACAAC AATT GACGTGTAATCTCGTTTTT ACATGGCTTAGGTTT TERM 1202 1171039 - 1171070 + T 100 -10.2 -4.68424 | opp_overlap 1171034 1171039 ATGATTAAAATAAAA CGAGATTACACAAC AATT GACGTGTAATCTCG TTTTTACATGGCTTA TERM 1203 1171070 - 1171039 - T 100 -12.4 -5.14626 | opp_overlap 1171039, overlap 1171034 ATGATTAAAATAAAA CGAGATTACACAAC AATT GACGTGTAATCTCG TTTTTACATGGCTTA TERM 1204 1171110 - 1171154 + T 100 -13.2 -5.66229 | opp_overlap 1171115, overlap 1171115 TTAAATATTGATATA AAAAACCGTAATTTTAATGG GCGTG CCATTAAAATTACGGTTTGC TTTTTTGTTATTGCT TERM 1205 1171115 - 1171149 + T 100 -17.5 -4.51301 | opp_overlap 1171115, overlap 1171110 TATTGATATAAAAAA CCGTAATTTTAATGG GCGTG CCATTAAAATTACGG TTTGCTTTTTTGTTA TERM 1206 1171149 - 1171115 - T 100 -17.5 -5.38047 | opp_overlap 1171115 1171110 TATTGATATAAAAAA CCGTAATTTTAATGG GCGTG CCATTAAAATTACGG TTTGCTTTTTTGTTA SAV1115 1172073 - 1171162 - | heme synthase TERM 1207 1171568 - 1171597 + g 70 -3.7 -4.85129 | gap 1 CAATAAATGATGATT GCCATTAACCATGT TAA ACGTC-TTAATGGC TTTTTGATATATAAT TERM 1208 1173045 - 1173058 + G 90 -8.1 -5.00412 | GACAAATTAGTTTAA CAGCG ATTG CGCTG TTTTTAGTTGTATTT TERM 1209 1173359 - 1173377 + G 82 -9 -4.05583 | opp_overlap 1173358 CAAATGTTTATATAT TCACTAAA TTA TTTAGTGA TCTTTTTCGTGTTAG ctaB 1172510 - 1173424 + | protoheme IX farnesyltransferase SAV1117 1173449 - 1173910 + | hypothetical protein TERM 1210 1173934 - 1173960 + F 86 -7.4 -5.14563 | opp_overlap 1173935, overlap 1173935 TACAAATGATACTAA TCTGATAAGGCA ATT TGTTTTATCAGG TTTTTTGATGAAGAA TERM 1211 1173935 - 1173959 + F 77 -8.7 -3.68256 | opp_overlap 1173935, overlap 1173934 ACAAATGATACTAAT CTGATAAGGCA ATT TGTTTTATCAG GTTTTTTGATGAAGA TERM 1212 1173980 - 1174019 + F 88 -5.9 -5.65177 | gap 1, overlap 1173981 TTGATGAAGAATAGT CGGACAGTTGATGGTATT CATTT GATACC-TTAACTGTCCA TTTTTTTATACATAT TERM 1213 1173981 - 1174018 + F 86 -9.4 -3.9748 | gap 1, overlap 1173980 TGATGAAGAATAGTC GGACAGTTGATGGTATT CATTT GATACC-TTAACTGTCC ATTTTTTTATACATA TERM 1214 1174988 - 1174972 - g 72 -5.9 -4.42667 | TTAAAAGGATTAAAA CCATTGA AAA TCAATAG CGATTTAGCACATAT SAV1118 1174237 - 1175274 + | hypothetical protein SAV1119 1175290 - 1175724 + | hypothetical protein TERM 1215 1175770 - 1175783 + T 71 -2.4 -5.47159 | GAAACCACTAACTAG CATC TGACTC GATG TTTTTATTTATTCGG SAV1121 1176713 - 1175787 - | glycerophosphoryl diester phosphodiesterase TERM 1216 1176146 - 1176136 - G 74 -5.4 -4.82901 | TGTTCTTTATAAAAA CTTG TCA CAAG AACGCGGTCAAATGC SAV1122 1176952 - 1177206 + | hypothetical protein SAV1123 1177598 - 1177209 - | hypothetical protein SAV1124 1177668 - 1178210 + | methyltransferase SAV1125 1178212 - 1178694 + | phosphopantetheine adenyltransferase-like protein TERM 1217 1178748 - 1178701 - T 90 -8 -5.1963 | opp_overlap 1178704, overlap 1178704 TTTAAGTAATAAAAA TAACAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTGTTT TCATTTGTTAACGAT TERM 1218 1178704 - 1178745 + T 81 -7.5 -4.67942 | opp_overlap 1178701 1178704 AAGTAATAAAAATAA CAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTG TTTTCATTTGTTAAC TERM 1219 1178745 - 1178704 - T 100 -9.7 -4.67357 | opp_overlap 1178704, overlap 1178701 AAGTAATAAAAATAA CAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTG TTTTCATTTGTTAAC SAV1126 1179895 - 1178756 - | hypothetical protein TERM 1220 1179487 - 1179505 + g 77 -6 -4.82678 | ATTCGCTAATGATAC GAGGGTAG CTT TTACCTTC TTTTACTTTTTGTGA SAV1127 1180022 - 1180579 + | hypothetical protein rpmF 1180659 - 1180832 + | 50S ribosomal protein L32 TERM 1221 1180855 - 1180886 + T 100 -13.2 -5.0916 | opp_overlap 1180855 TACTCAATATAAAAA GTCCCGCTTAAAAT GATT GTTTTAAGTGGGAC TTTTTATATTGCGAA TERM 1222 1180886 - 1180855 - T 100 -10.3 -5.10767 | opp_overlap 1180855 TACTCAATATAAAAA GTCCCGCTTAAAA TGATTG TTTTAAGTGGGAC TTTTTATATTGCGAA TERM 1223 1180904 - 1180947 + T 75 -9.7 -2.53134 | opp_overlap 1180905, overlap 1180903 1180902 1180898 TTTATATTGCGAAAA ATAATTGGCGAACGAGGTA ACTGGA TACCTCATCCGCCAATTAA AATTTGTTAATTTAA TERM 1224 1180946 - 1180905 - T 100 -17.6 -4.61231 | opp_overlap 1180904 1180903 1180902 1180898 TTATATTGCGAAAAA TAATTGGCGAACGAGGTA ACTGGA TACCTCATCCGCCAATTA AAATTTGTTAATTTA SAV1129 1182923 - 1180986 - | iron-regulated cell wall-anchored protein SirH TERM 1225 1181228 - 1181242 + g 70 -4.3 -4.72272 | CTGCTGAAGTTTGAA CAACA TCTTT TGTTG TTTTTGATGAAGCAG TERM 1226 1181367 - 1181385 + g 74 -3.1 -5.26119 | CGTTTTGTCTTTACC TGACTCA CTAGA TGCGTCA TTTTCTTTTTCAACA TERM 1227 1182978 - 1182954 - R 73 -9.5 -2.64794 | opp_overlap 1182951 1182954 1182950, overlap 1182958 1182962 CCTAATTGTATATTA TCAACTGATAA TCA TTATCAATTGA TTACTTGTATTGTAC TERM 1228 1183076 - 1183035 - R 100 -11.3 -5.626 | gap 1, opp_overlap 1183035 1183038, overlap 1183019 TATTTTATAAAAAAA TAACCTATGTTATAGATTAT GAA AT-ATCTATGACATAGGTTA AATAAAATTTAAAAT TERM 1229 1183038 - 1183073 + r 85 -10.8 -3.08966 | gap 1, opp_overlap 1183035, overlap 1183035 TTTATAAAAAAATAA CCTATGTTATAGATTAT GAA AT-ATCTATGACATAGG TTAAATAAAATTTAA SAV1130 1184178 - 1183126 - | cell surface protein SAV1131 1184387 - 1185070 + | hypothetical protein TERM 1230 1185159 - 1185192 + G 87 -10.5 -3.73775 | gap 1, overlap 1185160 AATGATTGGTAGCGT GTTGGCTGATGAGATA AAA TATC-CATCAGCCAAA TTTAATCAACCTGAA TERM 1231 1185160 - 1185191 + G 93 -14 -2.84051 | gap 1, overlap 1185159 ATGATTGGTAGCGTG TTGGCTGATGAGATA AAA TATC-CATCAGCCAA ATTTAATCAACCTGA SAV1132 1185070 - 1186146 + | hypothetical protein SAV1133 1186143 - 1187021 + | putative iron transport lipoprotein SirF TERM 1232 1187320 - 1187340 + G 72 -6.1 -4.30477 | TTGGCGTTTCCTCAG GTGCACTTA TAA TGAGAGCAC TTTGTATGTTGTTTA SAV1134 1187178 - 1187999 + | putative iron transport permease SirG SAV1135 1188061 - 1188795 + | NPQTN specific sortase B isdG 1188814 - 1189137 + | heme-degrading monooxygenase IsdG TERM 1233 1189196 - 1189223 + F 86 -5 -5.52384 | gap 1 TGTTAGCTTTTGTAA CGACCATACAT GATACCG ATG-ATGGTCG TTTTTTTAATGAACA TERM 1234 1189472 - 1189486 + F 82 -4.4 -5.61881 | opp_overlap 1189485 CAAATGTTTTCATCT TATTAA TGA TTAATA TTTTTATTTTTAAAA SAV1137 1189521 - 1190261 + | rRNA methylase TERM 1235 1190573 - 1190537 - f 85 -10.4 -3.68351 | gap 1, opp_overlap 1190531 1190537 GTGGTACCACGGAAA TGACTTTCGTCC-CTTA TTTT TAAGAGGATGAAAGTCA TTTTTTAGTTAAACA TERM 1236 1190537 - 1190573 + F 100 -12.6 -5.26875 | gap 1, opp_overlap 1190537, overlap 1190531 GTGGTACCACGGAAA TGACTTTCGTCC-CTTA TTTT TAAGAGGATGAAAGTCA TTTTTTAGTTAAACA pheS 1190641 - 1191699 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1237 1192286 - 1192276 - g 71 -3.2 -5.1764 | TATATAATACAAAAA TGAC TAA GCCA GAGACAACATCAAAT pheT 1191699 - 1194101 + | Phe-tRNA synthetase beta chain TERM 1238 1194106 - 1194163 + T 100 -12.5 -4.74103 | gap 1, opp_overlap 1194111, overlap 1194111 TTATTAGATAATGAT TTAAACCCCATGTATAAGGATATC TGAAGTAGATT GATATCCTTA-ACATGGGGTTTTA TTTTTGGATTCACCA TERM 1239 1194111 - 1194158 + T 100 -12.4 -5.29885 | gap 1, opp_overlap 1194111, overlap 1194106 AGATAATGATTTAAA CCCCATGTATAAGGATATC TGAAGTAGATT GATATCCTTA-ACATGGGG TTTTATTTTTGGATT TERM 1240 1194158 - 1194111 - T 100 -12.4 -3.73386 | gap 1, opp_overlap 1194111 1194106 AGATAATGATTTAAA CCCCATGTATAAGGATATC TGAAGTAGATT GATATCCTTA-ACATGGGG TTTTATTTTTGGATT TERM 1241 1194286 - 1194254 - T 70 -6.3 -4.06892 | opp_overlap 1194254 ACAACTGCATATAAA GTCATACTTATGAGC AAA GCAAATTAGTATGAC TTACCTAATAGGATT TERM 1242 1194376 - 1194362 - T 72 -8.6 -2.94925 | ACAGTGGATTACAGA TGATGC TTC GCATCA CTGCATATAAAGTCA TERM 1243 1194420 - 1194388 - T 70 -6.3 -4.053 | opp_overlap 1194388 ATCACTGCATATAAA GTCATACTTATGAGC AAA GCAAATTAGTATGAC TTACCTAATAGGATC TERM 1244 1194542 - 1194515 - T 74 -6.4 -4.43859 | gap 1, opp_overlap 1194515 1194510, overlap 1194533 CACAACTGCATAAAA GCCTCTAATGATT AAA AATCAA-AGAGGC TTTAAAATTTTTTGG SAV1140 1195471 - 1194533 - | ribonuclease HIII TERM 1245 1194774 - 1194784 + g 76 -4 -5.34857 | GACTTCGATTCTCCT TTTG TTT CAAA TTTTGTTTTCTTTGG SAV1141 1195841 - 1196107 + | hypothetical protein SAV1142 1196108 - 1196629 + | hypothetical protein SAV1143 1196702 - 1198414 + | hypothetical protein mutS2 1198424 - 1200772 + | recombination and DNA strand exchange inhibitor protein trxA 1200945 - 1201259 + | thioredoxin TERM 1246 1201277 - 1201306 + F 100 -8.6 -5.48623 | opp_overlap 1201267 TATAACCAATGACGA CTGGGGCATTTC TTTAAT GAATTGCTCCAG TTTTTGTTTGTGTTT TERM 1247 1202217 - 1202231 + G 71 -8.6 -3.04715 | overlap 1202216 AGCGAATGTTAACTG CAAGTG AAT CACTTG ATTTTGAACGGGCTA uvrC 1201583 - 1203364 + | excinuclease ABC subunit C TERM 1248 1203400 - 1203366 - f 76 -6.4 -4.56969 | opp_overlap 1203366, overlap 1203369 1203370 AATTGCATAAATAAA TTACTGGGCGTGAGAA TCA TTCTCATGCCCCAAAA TATATGAAATAATGT TERM 1249 1203397 - 1203369 - f 72 -8.1 -3.22499 | opp_overlap 1203366, overlap 1203366 1203370 TGCATAAATAAATTA CTGGGCGTGAGAA TCA TTCTCATGCCCCA AAATATATGAAATAA TERM 1250 1203396 - 1203370 - f 73 -9.4 -2.52776 | opp_overlap 1203366, overlap 1203369 1203366 GCATAAATAAATTAC TGGGCGTGAGAA TCA TTCTCATGCCCC AAAATATATGAAATA TERM 1251 1203427 - 1203437 + F 82 -4 -5.50499 | ATGTTACAATATGGT TAAC AAA GTTA TTTTTTTGAATGTAC sdhC 1203688 - 1204302 + | succinate dehydrogenase cytochrome b-558 TERM 1252 1205779 - 1205767 - g 84 -6.3 -5.0925 | CGTGAAAATGAAAAA CTGTT AGA AACAG ATAAAAAGATTGTTG sdhA 1204354 - 1206120 + | succinate dehydrogenase flavoprotein subunit TERM 1253 1206342 - 1206331 - g 76 -4.4 -5.12707 | TTAAAGGTGAAAAAA CAAC ACCT GTTG TCTGGGATATGAACT sdhB 1206120 - 1206935 + | succinate dehydrogenase iron-sulfur subunit murI 1207171 - 1207971 + | glutamate racemase TERM 1254 1208188 - 1208170 - g 83 -7.5 -4.69656 | AAGCATTGAATAAAA CTGTCAT AGCTG ATGACAG TGGACTAGAAGTTTT TERM 1255 1208426 - 1208444 + G 74 -6 -4.52589 | overlap 1208428 ATATGGCGAAAATGG TTTCGGAT ATG ATCCGATA TTTTATGTACCGAAA TERM 1256 1208428 - 1208442 + G 79 -8.6 -3.87627 | overlap 1208426 ATGGCGAAAATGGTT TCGGAT ATG ATCCGA TATTTTATGTACCGA SAV1152 1207983 - 1208570 + | hypothetical protein SAV1153 1208563 - 1209066 + | hypothetical protein TERM 1257 1209050 - 1209083 + F 90 -4.8 -5.75822 | gap 1 ATCACGAAACAATCA GTCATA-CTACTTTT TAAAT AGAAGTAGCTATGGC TTTTTTTAGTTTATA SAV1154 1209224 - 1209361 + | hypothetical protein SAV1155 1209555 - 1209884 + | hypothetical protein TERM 1258 1209894 - 1209913 + T 78 -6.4 -4.84527 | AAATAATTGATAGAA GCCATGCT ATAG AGTGTGGC TTTTTGCTATATCCA TERM 1259 1210229 - 1210188 - T 100 -11.8 -5.80951 | gap 1, opp_overlap 1210199 ACTTAAAATAAAAAA GCACGCCAATACGTTAGCA TTGTT TTCTAACGT-TTGGCGTAC AACTATTTAATTCAG SAV1156 1210654 - 1210253 - | formyl peptide receptor-like 1 inhibitory protein TERM 1260 1210511 - 1210529 + g 71 -3.2 -5.1361 | ACGTTCATCGTCCTT TTTAGC TTGATCT GCTAAA TTTTTTGCGATTTCT TERM 1261 1211250 - 1211273 + H 80 -6.8 -4.77438 | overlap 1211253 GGCATTGAGTATTAT TGGCAATCAC TTAA GTGATTGTTA TTTTTCGTGGTCAAT TERM 1262 1211253 - 1211270 + H 85 -8.5 -4.49314 | overlap 1211250 ATTGAGTATTATTGG CAATCAC TTAA GTGATTG TTATTTTTCGTGGTC TERM 1263 1211718 - 1211694 - g 79 -3.7 -5.40004 | opp_overlap 1211717, overlap 1211696 CAGTAAATGAAAAAA TGGACATTAAT GAT ATTAATATCGA CAATTTCCAATCTGT SAV1157 1211324 - 1211830 + | hypothetical protein SAV1158 1212090 - 1212587 + | fibrinogen-binding protein precursor TERM 1264 1212621 - 1212633 + F 81 -3.5 -5.5112 | AAGTTCAAAATAATT TAATA TTA TATTA TTTTTTATTAATAAA SAV1159 1212737 - 1213087 + | fibrinogen-binding protein precursor TERM 1265 1213131 - 1213092 - T 82 -8 -4.48664 | opp_overlap 1213097, overlap 1213097 TAAATAGATAATAAA TAAAACAGGTTGAGACAA AAAA TGGTCTTAACCTGTTTTC AATTTGCATATGTGA TERM 1266 1213097 - 1213126 + T 100 -10.1 -4.36595 | opp_overlap 1213092 1213097 AGATAATAAATAAAA CAGGTTGAGACAA AAAA TGGTCTTAACCTG TTTTCAATTTGCATA TERM 1267 1213126 - 1213097 - T 90 -7.9 -5.16038 | opp_overlap 1213097, overlap 1213092 AGATAATAAATAAAA CAGGTTGAGACAA AAAA TGGTCTTAACCTG TTTTCAATTTGCATA TERM 1268 1213554 - 1213535 - T 76 -9.4 -3.09273 | opp_overlap 1213539, overlap 1213539 GGGCCCCAACATAGA GAAATTGG ATCA CCAATTTC AACAGACAATGCAAG TERM 1269 1213738 - 1213758 + T 86 -9.1 -3.94773 | overlap 1213740 AATTAGTATTTCTTA TGCATGAGT TTT ACTCATGTA TTCATTTTTTAAGTA TERM 1270 1213740 - 1213756 + T 81 -9.5 -3.54575 | overlap 1213738 TTAGTATTTCTTATG CATGAGT TTT ACTCATG TATTCATTTTTTAAG TERM 1271 1213836 - 1213792 - T 100 -14.8 -3.13728 | gap 1, opp_overlap 1213792 1213799, overlap 1213776 1213799 1213802 ATTAGCTACAGCTAA TGATAAAGAACCACTACATAA TAAA TCAT-TAGTGGTTCTTTATCA TTTCTATCTCACTCT TERM 1272 1213792 - 1213836 + T 100 -12.6 -4.14392 | gap 1, opp_overlap 1213776 1213792 1213799 1213802, overlap 1213799 ATTAGCTACAGCTAA TGATAAAGAACCACTACATAA TAAA TCAT-TAGTGGTTCTTTATCA TTTCTATCTCACTCT TERM 1273 1213829 - 1213799 - T 75 -7.1 -4.07306 | gap 1, opp_overlap 1213799 1213792, overlap 1213792 1213802 ACAGCTAATGATAAA GAACCACTACATAA TAAA TCAT-TAGTGGTTC TTTATCATTTCTATC SAV1160 1214038 - 1213853 - | hypothetical protein SAV1161 1214893 - 1214660 - | hypothetical protein TERM 1274 1215107 - 1215126 + H 83 -8 -4.52857 | opp_overlap 1215095 1215096 1215107, overlap 1215097 1215096 TAATGTGTTCAAAAA GTTTTGAA CAAT TTCAAAAC TTTTATATAAAGGGT TERM 1275 1215126 - 1215107 - H 83 -8 -4.58283 | opp_overlap 1215097 1215096 1215107, overlap 1215095 1215096 TAATGTGTTCAAAAA GTTTTGAA CAAT TTCAAAAC TTTTATATAAAGGGT TERM 1276 1215311 - 1215332 + H 82 -4.4 -5.52384 | overlap 1215314 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 1277 1216728 - 1216698 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 1215412 - 1216731 + | IS1181 transposase TERM 1278 1216846 - 1216810 - T 77 -6 -4.93365 | gap 1, opp_overlap 1216809 GTGGAGAACCAAAAA TTAGCCGAAAAACATCA TTTC TGAAGT-TATCGGCTAA AGTTATAAATTATAT SAV1163 1217849 - 1216890 - | alpha-hemolysin precursor SAV1164 1218652 - 1218849 + | hypothetical protein TERM 1279 1218939 - 1218901 - T 100 -14.9 -3.51202 | opp_overlap 1218899 1218898 1218937, overlap 1218897 CATTAAATGAAGGAA TAGAGCCTAAGACAT AATAAATCA ATGTCTTAGGCTCTA CAATATTATATTGGT TERM 1280 1219030 - 1219014 - T 72 -8 -3.68024 | GGCCCCAACACAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA SAV1165 1219207 - 1219076 - | hypothetical protein SAV1166 1220055 - 1219339 - | superantigen-like protein SAV1167 1220888 - 1220163 - | superantigen-like protein TERM 1281 1220314 - 1220324 + g 76 -2.6 -5.48054 | opp_overlap 1220314 CCTTTATTATAAGAA TTAT TAT ATAA TTTTTTACTTTTAAT SAV1168 1221708 - 1220983 - | superantigen-like protein argF 1222146 - 1223147 + | ornithine carbamoyltransferase SAV1170 1223170 - 1224102 + | carbamate kinase TERM 1282 1224160 - 1224204 + F 71 -6 -4.4388 | gap 2 ATTTTTATTATTTAT GTGCACCCC-C-TGAAAATA ATGCCTC TATTTTGATGCGGGGTGCAC TTTCTTAATTTATAT SAV1171 1224274 - 1225830 + | hypothetical protein SAV1172 1226137 - 1226364 + | hypothetical protein TERM 1283 1226626 - 1226607 - T 100 -10 -4.86133 | opp_overlap 1226607 GATATACACTAAAAA GAGGCAAG ATTA CCTGCCTC TTTTTTAGTTATTAA TERM 1284 1226607 - 1226626 + T 95 -7.8 -5.37865 | opp_overlap 1226607 GATATACACTAAAAA GAGGCAAG ATTA CCTGCCTC TTTTTTAGTTATTAA SAV1173 1227617 - 1226670 - | exfoliative toxin A TERM 1285 1227178 - 1227163 - G 76 -4.6 -5.1675 | TGACCTATGAAAAAA CATCCG CTAA CGGGTG CCGTCAATCCTGCGA TERM 1286 1227412 - 1227402 - G 70 -4 -4.84527 | GCCAGACATGAAAAA TGTT GTG AACA CTGATGAAACTAGAG SAV1174 1227866 - 1228054 + | hypothetical protein TERM 1287 1228085 - 1228110 + F 95 -8.3 -5.51402 | opp_overlap 1228088, overlap 1228088 AGTTAAATAATTAAA AAACCACGTCT CGAT GGACGTGGTTA TTTTTTTAAATGTAT TERM 1288 1228088 - 1228107 + F 100 -10 -4.8236 | opp_overlap 1228088, overlap 1228085 TAAATAATTAAAAAA CCACGTCT CGAT GGACGTGG TTATTTTTTTAAATG TERM 1289 1228107 - 1228088 - f 100 -9.3 -5.4148 | opp_overlap 1228088 1228085 TAAATAATTAAAAAA CCACGTC TCGATG GACGTGG TTATTTTTTTAAATG TERM 1290 1228465 - 1228486 + F 70 -4.3 -4.95484 | opp_overlap 1228465, overlap 1228460 AATTCAAAACAAAAA GAGCCCCGT AATC ACGGAACTC TTTTGTTTGGTAATG TERM 1291 1228486 - 1228465 - f 100 -8.7 -5.49568 | opp_overlap 1228465 1228460 AATTCAAAACAAAAA GAGCCCCGT AATC ACGGAACTC TTTTGTTTGGTAATG TERM 1292 1229196 - 1229182 - f 70 -8.6 -2.64679 | overlap 1229181 1229179 AGCAATCGCAAATAC TGTGCA AGC TGCACA ACAACATGATAGTGT SAV1175 1229417 - 1230103 + | 2-haloalkanoic acid dehalogenase TERM 1293 1230199 - 1230160 - T 78 -6.6 -4.68506 | gap 1 AAGTAATTGTAAAAA CGACACTACGAA-AAGA TGCATTT TCATGCTCGTAGTGTCG AATATTATTATCTTA SAV1176 1230653 - 1230207 - | hypothetical protein TERM 1294 1231616 - 1231601 - g 71 -3.3 -5.04987 | AAGATTTTGAAAAAA CATCA GTTGCT TGATG ATGCTTTTAGAGCAA SAV1177 1230848 - 1232461 + | hypothetical protein TERM 1295 1232476 - 1232506 + F 100 -12.7 -6.28401 | overlap 1232477 ATATACCAAGGGTTT AGCCCGATTTATC TTAAT GATAAATCGGGCA TTTTTTTGTTTTTTA TERM 1296 1232477 - 1232505 + F 100 -16.2 -4.3155 | overlap 1232476 TATACCAAGGGTTTA GCCCGATTTATC TTAAT GATAAATCGGGC ATTTTTTTGTTTTTT SAV1178 1232605 - 1233036 + | cell division protein MraZ SAV1179 1233052 - 1233987 + | S-adenosyl-methyltransferase mraW ftsL 1234001 - 1234402 + | cell division protein TERM 1297 1234433 - 1234420 - g 78 -2.4 -5.66926 | opp_overlap 1234420 1234423 TTAAAAAAAATAAAA TAGG GGCAGT CCTA CTTGTTGGTTTATTC TERM 1298 1234423 - 1234457 + G 74 -2.1 -5.50925 | opp_overlap 1234420, overlap 1234420 AAAAAAATAAAATAG GGGCAGTCCTACT TGTTGGTTT ATTCGGACTGCTC TTTTTTATATTGGTT TERM 1299 1236166 - 1236156 - g 71 -5.4 -4.56914 | GTAGGTAAATCAAAA GATG ACA CATC TAATGCAGAGTATAG pbpA 1234383 - 1236617 + | penicillin-binding protein 1 mraY 1236909 - 1237874 + | phospho-N-muramic acid-pentapeptide translocase murD 1237876 - 1239225 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1300 1239389 - 1239379 - g 74 -5.4 -4.78077 | TCTAATCAAAATAAA GATG ATA CATC TCAACAAGCTGATTT TERM 1301 1240074 - 1240053 - g 75 -8.9 -3.40597 | opp_overlap 1240057 1240065, overlap 1240051 1240057 1240065 TGCTTTAGTGAAATA TAAAGGTAA ATAT TTACCTTTA TTAGAAAATGGTAAA div1b 1239241 - 1240560 + | cell division protein ftsA 1240666 - 1242078 + | cell division protein TERM 1302 1242442 - 1242456 + G 76 -10 -2.79023 | overlap 1242439 GTGGCGGAACTGGTA CTGGTG CAG CACCAG TCGTTGCTAAAATTG ftsZ 1242111 - 1243283 + | cell division protein FtsZ TERM 1303 1243320 - 1243342 + F 100 -12.2 -5.5943 | opp_overlap 1243320 ATAATTCAACACAAA TCATCAGATA ACA TATCTGATGA TTTTTTTACTAATTT TERM 1304 1243342 - 1243320 - f 100 -12.2 -4.24397 | opp_overlap 1243320 ATAATTCAACACAAA TCATCAGATA ACA TATCTGATGA TTTTTTTACTAATTT TERM 1305 1243773 - 1243755 - g 74 -3.1 -5.36441 | overlap 1243756 GTTTGATAGAAAAAA TTGGGTG TTTCC CATCCAA ACACATGAAAATAAA SAV1187 1243543 - 1244334 + | hypothetical protein SAV1188 1244352 - 1245026 + | hypothetical protein SAV1189 1245023 - 1245586 + | hypothetical protein SAV1190 1245598 - 1245888 + | hypothetical protein TERM 1306 1245903 - 1245933 + F 90 -8.3 -4.87037 | opp_overlap 1245903 AATTAAGCGACATAA CGAGGCAAGGGTA CATGA TACTTTAGCCTCG TTTTTGATATGTATT SAV1191 1246139 - 1246777 + | YlmH SAV1192 1246801 - 1247418 + | hypothetical protein ileS 1247639 - 1250392 + | isoleucyl-tRNA synthetase SAV1194 1250683 - 1251480 + | hypothetical protein truncated-tnp 1251753 - 1251541 - | putative transposase TERM 1307 1251618 - 1251585 - G 100 -12.7 -4.75174 | opp_overlap 1251585 TAGGCAATGTAAAAA GCTGATTTCTATTAA TTAT TTGATAGAAATCAGC TTTTTTGATATGTAT TERM 1308 1251585 - 1251618 + g 100 -14.9 -5.25893 | opp_overlap 1251585 TAGGCAATGTAAAAA GCTGATTTCTATTAA TTAT TTGATAGAAATCAGC TTTTTTGATATGTAT TERM 1309 1251643 - 1251662 + g 74 -5.8 -4.56314 | gap 1, opp_overlap 1251645, overlap 1251644 1251645 1251647 ATGTATTTTATAATG TA-CAGCTC GTT GAGCTGCTA TTTTCCTTATATTAA TERM 1310 1251645 - 1251659 + g 76 -10 -2.91057 | opp_overlap 1251645, overlap 1251644 1251643 1251647 GTATTTTATAATGTA CAGCTC GTT GAGCTG CTATTTTCCTTATAT TERM 1311 1251659 - 1251645 - G 75 -10 -2.60079 | opp_overlap 1251644 1251643 1251645 1251647 GTATTTTATAATGTA CAGCTC GTT GAGCTG CTATTTTCCTTATAT TERM 1312 1252037 - 1252082 + H 81 -7.1 -4.6526 | opp_overlap 1252039, overlap 1252039 ATTGTATAAATAGAG AACAGCAGTAAGATAATTTTT AATT AGAAAATATCTTACTACTGTC TTTTTAGGGATTTAT TERM 1313 1252080 - 1252039 - H 86 -9.7 -3.80279 | opp_overlap 1252037 1252039 TGTATAAATAGAGAA CAGCAGTAAGATAATTTTT AATT AGAAAATATCTTACTACTG TCTTTTTAGGGATTT TERM 1314 1252039 - 1252080 + H 90 -9.7 -3.9318 | opp_overlap 1252039, overlap 1252037 TGTATAAATAGAGAA CAGCAGTAAGATAATTTTT AATT AGAAAATATCTTACTACTG TCTTTTTAGGGATTT TERM 1315 1252488 - 1252504 + G 76 -6.7 -4.4634 | GGGGAATATTGAGTG GAAAAAT GAC ATTTTTC TTTATTATTACCATT lsp 1252304 - 1252795 + | lipoprotein signal peptidase SAV1197 1252795 - 1253712 + | ribosomal large subunit psudouridine synthase D TERM 1316 1254078 - 1254052 - f 79 -8.1 -3.88766 | opp_overlap 1254052 ATTGTATATACTAAA CCTCATGTC GATATTAAA GACATGAGG TTTTTTGTTTCTAAA TERM 1317 1254052 - 1254078 + F 100 -8.1 -5.72622 | opp_overlap 1254052 ATTGTATATACTAAA CCTCATGTC GATATTAAA GACATGAGG TTTTTTGTTTCTAAA pyrR 1254112 - 1254639 + | pyrimidine regulatory protein PyrR TERM 1318 1254800 - 1254827 + F 100 -10.1 -5.88565 | TTGTCACACTTTTTG TCTCTTTACAT ATACTG ATGTAAAGAGA TTTTTTTATTATCGG pyrP 1254857 - 1256164 + | uracil permease pyrB 1256192 - 1257073 + | aspartate carbamoyltransferase catalytic subunit pyrC 1257091 - 1258365 + | dihydroorotase pyrAA 1258367 - 1259467 + | carbamoyl phosphate synthase small subunit TERM 1319 1260415 - 1260396 - g 85 -8.6 -4.11216 | GCGTTAGCTTCAAAA GCAACAGG ATAT CCTATTGC AAAATTAGCTGCTAA carB 1259460 - 1262633 + | carbamoyl phosphate synthase large subunit pyrF 1262743 - 1263435 + | orotidine-5-phosphate decarboxylase pyrE 1263435 - 1264046 + | orotate phosphoribosyltransferase SAV1206 1264076 - 1264288 + | hypothetical protein TERM 1320 1264554 - 1264564 + F 70 -4 -4.88228 | opp_overlap 1264554 TATCATTTATTAACA TATG TAT CATA TTTTTAATCTTGCGT SAV1207 1264725 - 1265126 + | hypothetical protein TERM 1321 1265325 - 1265372 + T 100 -13.1 -3.86822 | gap 1, opp_overlap 1265325 1265329, overlap 1265329 GCATTAAATAATAAA TAAACACCTCG-CAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTGTTTA TTTGTCGACAACTTG TERM 1322 1265372 - 1265325 - T 100 -10.9 -4.60258 | gap 1, opp_overlap 1265325 1265329, overlap 1265329 GCATTAAATAATAAA TAAACACCTC-GCAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTGTTTA TTTGTCGACAACTTG TERM 1323 1265329 - 1265368 + T 100 -9.5 -4.55295 | gap 1, opp_overlap 1265325 1265329, overlap 1265325 TAAATAATAAATAAA CACCTCG-CAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTG TTTATTTGTCGACAA TERM 1324 1265368 - 1265329 - T 82 -7.3 -4.82212 | gap 1, opp_overlap 1265329 1265325, overlap 1265325 TAAATAATAAATAAA CACCTC-GCAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTG TTTATTTGTCGACAA SAV1208 1267086 - 1265389 - | fibrinogen binding protein TERM 1325 1265872 - 1265915 + g 73 -7 -3.98762 | overlap 1265905 ATGATGTAATTGTTG TTCGATTGTTGAAAAATAAT CTAT ATTATCTTTCGTCAATTGAA TTTGATGTTGTAATT gmk 1267361 - 1267984 + | guanylate kinase-like protein SAV1210 1267984 - 1268202 + | DNA-directed RNA polymerase omega chain TERM 1326 1268269 - 1268286 + F 100 -7.7 -5.75822 | opp_overlap 1268269 CATATCCAAATCAAA CGCACCT ATGT AGGTGTG TTTTTTTAGTTTATC SAV1211 1268418 - 1269617 + | pantothenate metabolism flavoprotein priA 1269617 - 1272025 + | primosomal protein TERM 1327 1272108 - 1272157 + F 100 -9 -5.01546 | gap 1, opp_overlap 1272108 1272107 TAAGTACAGAAAAAG GGCAGAATATACAACTGTTAACT ATTTA AATTAGCAGTT-TATATTCTGTC TTTTTATATGGCTTT SAV1213 1272531 - 1273484 + | hypothetical protein SAV1214 1273850 - 1273647 - | hypothetical protein SAV1215 1274149 - 1274637 + | putative polypeptide deformylase SAV1216 1274630 - 1275565 + | methionyl-tRNA formyltransferase SAV1217 1275484 - 1276869 + | RNA-binding Sun protein TERM 1328 1276911 - 1276895 - g 84 -5.2 -5.45802 | TGCTGAAAAGAAAAA GAAGAA TAAAT TTCTTC CAAATTTTGACAAGC TERM 1329 1277003 - 1276992 - g 71 -3 -5.10208 | CAAGGTCAACAAAAA TTTC GAGC GAAA CAGATTTTTGAATGG SAV1218 1276872 - 1277966 + | radical SAM family protein SAV1219 1277973 - 1278716 + | putative PP2C protein phosphatase TERM 1330 1278882 - 1278872 - g 71 -5.4 -4.55446 | GAAGAAACATTAAAA CGTT TTG AACG AGAAGTACATAACTC SAV1220 1278713 - 1280707 + | protein kinase TERM 1331 1280726 - 1280755 + F 100 -10.1 -5.09762 | opp_overlap 1280728 TAATTGAAGTAAATG TACCGAGGTTTCT ATTT GGAAGTCTCGGTA TTTTTATGTTGAGAT SAV1221 1280935 - 1281810 + | hypothetical protein cfxE 1281811 - 1282455 + | ribulose-5-phosphate 3-epimerase-like protein TERM 1332 1282912 - 1282900 - g 72 -4.9 -4.65838 | CATACAGTTGAAAAA GATAA GAG TTATC CGTACATTTCATTTA SAV1223 1282462 - 1283103 + | hypothetical protein TERM 1333 1283195 - 1283234 + T 74 -8.1 -3.61398 | overlap 1283199 TAACATAATAATAGA TGAATCACGCTGTAATT AATGAA GATTATGGCGTGATTTA TTATTGGAAGGAAAA TERM 1334 1283199 - 1283230 + T 76 -6.7 -4.44667 | overlap 1283195 ATAATAATAGATGAA TCACGCTGTAATT AATGAA GATTATGGCGTGA TTTATTATTGGAAGG TERM 1335 1283429 - 1283404 - T 100 -10.6 -5.7946 | opp_overlap 1283404 1283407 TTGGTAACAAAAAAA GAACTAAGAG GTTGAG CTCTTAGTTC TTAAGTAAATGTGTC TERM 1336 1283404 - 1283429 + T 81 -10.6 -3.09491 | opp_overlap 1283404, overlap 1283407 TTGGTAACAAAAAAA GAACTAAGAG GTTGAG CTCTTAGTTC TTAAGTAAATGTGTC TERM 1337 1283439 - 1283461 + T 74 -3.4 -5.37043 | opp_overlap 1283439 TAGTTCTTAAGTAAA TGTGTCCT CCACATA AGGTCACA TTTTTTATGTGCAAT rpmB 1283672 - 1283484 - | 50S ribosomal protein L28 SAV1225 1284115 - 1284489 + | hypothetical protein SAV1226 1284504 - 1286150 + | hypothetical protein TERM 1338 1286155 - 1286208 + F 95 -11.6 -3.84363 | gap 1, opp_overlap 1286168, overlap 1286168 CAGTAGAATAAAAAT TTAAAATAAAAAACTACCAA-TGAT AAATC ATCAGTTGGTAGTTTTTTATTTTGC TATTTTAGTGTTATT TERM 1339 1286195 - 1286168 - f 95 -7.2 -5.80951 | gap 1, opp_overlap 1286155 1286168 ATTTAAAATAAAAAA CTACCAA-TGATA AAT CATCAGTTGGTAG TTTTTTATTTTGCTA TERM 1340 1286168 - 1286195 + F 95 -6.5 -5.83211 | gap 1, opp_overlap 1286168, overlap 1286155 ATTTAAAATAAAAAA CTACCAA-TGAT AAATC ATCAGTTGGTAG TTTTTTATTTTGCTA recG 1286340 - 1288400 + | ATP-dependent DNA helicase SAV1228 1288618 - 1289175 + | fatty acid biosynthesis transcriptional regulator plsX 1289180 - 1290166 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1341 1291039 - 1291023 - g 73 -8.1 -3.65523 | opp_overlap 1291025 AAAAAAATAAATAGA GATGTTA AGT TAACATC AATTCAAACTTTAGA fabD 1290159 - 1291085 + | malonyl CoA-acyl carrier protein transacylase fabG 1291072 - 1291812 + | 3-oxoacyl-(acyl-carrier protein) reductase TERM 1342 1291844 - 1291885 + F 73 -8.2 -3.53343 | gap 1 CTCATTGACGCAGTG GTTGACT-GGTCATCCAAT GGAGA ATTGTCTGACCTAGTCAAC TTTGCGGGGGAAATT TERM 1343 1292162 - 1292131 - f 95 -11.8 -3.37071 | opp_overlap 1292126 1292135, overlap 1292135 AAAGCTCATGCATAA GAAACACTAATCAA TAAA TTGATAAGTGTTTC TAAAATTTCTACTTG TERM 1344 1292158 - 1292135 - f 74 -6.8 -4.33417 | opp_overlap 1292135 1292126, overlap 1292131 CTCATGCATAAGAAA CACTAATCAA TAAA TTGATAAGTG TTTCTAAAATTTCTA TERM 1345 1292135 - 1292158 + F 71 -6.8 -3.96291 | opp_overlap 1292131 1292135, overlap 1292126 CTCATGCATAAGAAA CACTAATCAA TAAA TTGATAAGTG TTTCTAAAATTTCTA hmrB 1292247 - 1292480 + | acyl carrier protein TERM 1346 1292493 - 1292518 + F 100 -9.7 -6.01187 | TAATAAATCTTACAT CTGGGTCGTCA GTAT TGTCGACTCAG TTTTTTTCTTTAATT rnc 1292596 - 1293327 + | RNase III smc 1293474 - 1297040 + | chromosome segregation SMC protein SAV1235 1297040 - 1298290 + | signal recognition particle SAV1236 1298277 - 1298609 + | hypothetical protein ffh 1298635 - 1300002 + | signal recognition particle-like protein TERM 1347 1300040 - 1300088 + F 100 -9.2 -4.65895 | gap 1, opp_overlap 1300040 1300054, overlap 1300042 TTTGTTGCAATGAGA TGTGCATCCCG-AAAGTTATACT AAAG AATATAACTTTATGGGGTGCATA TTTTTAGATACACAA TERM 1348 1300042 - 1300086 + F 90 -9.6 -3.94812 | gap 1, opp_overlap 1300040 1300054, overlap 1300040 TGTTGCAATGAGATG TGCATCCCG-AAAGTTATACT AAAG AATATAACTTTATGGGGTGCA TATTTTTAGATACAC rpsP 1300437 - 1300712 + | 30S ribosomal protein S16 TERM 1349 1300718 - 1300704 - f 70 -4.3 -4.90302 | opp_overlap 1300713, overlap 1300713 GACGAACAAAAGAAA GCTAA GTAAT TTAGC GTAAAATTGTTCTAA TERM 1350 1300817 - 1300835 + F 100 -11 -5.33026 | AATATAGAACGTATT GGGTACCA TAA TGGTGCCC TTTTTCTTTGAATTA rimM 1300900 - 1301403 + | 16S rRNA processing protein trmD 1301403 - 1302140 + | tRNA-mehtyltransferase rplS 1302243 - 1302593 + | 50S ribosomal protein L19 TERM 1351 1302645 - 1302681 + T 100 -11.7 -5.66989 | opp_overlap 1302645 GACTCAAACAATAAA GCCATCTAGGTCACTTT TAT GGAGTGATATAGATGGC TTTTTTTGCTGTTTA TERM 1352 1302681 - 1302645 - T 85 -8.1 -4.58585 | opp_overlap 1302645 GACTCAAACAATAAA GCCATCTAGGTCACT TTTATGG AGTGATATAGATGGC TTTTTTTGCTGTTTA TERM 1353 1302811 - 1302779 - T 90 -7.2 -5.42975 | gap 1, opp_overlap 1302779 TTATATAAACAAAAA TCTACTAAGTGCCAT TGAA AAGG-ACTTAGTAGA TTTATTAAATATATG TERM 1354 1302779 - 1302811 + T 77 -7.2 -4.24285 | gap 1, opp_overlap 1302779 TTATATAAACAAAAA TCTACTAAGTGCCAT TGAA AAGG-ACTTAGTAGA TTTATTAAATATATG SAV1242 1305443 - 1302837 - | hypothetical protein rbgA 1305844 - 1306728 + | ribosomal biogenesis GTPase rnhB 1306712 - 1307479 + | RNase HII sucC 1307588 - 1308754 + | succinyl-CoA synthetase subunit beta sucD 1308776 - 1309684 + | succinyl-CoA synthetase subunit alpha TERM 1355 1309710 - 1309750 + F 100 -13 -3.9712 | gap 2, opp_overlap 1309705 1309704 TGATATAAATGGCTA TAGCCCA-TTCC-ATACTTT ATA AAAGTATCGGAAATGGGCTA TTTGTCGTGCAATGA TERM 1356 1310544 - 1310532 - g 74 -5.5 -4.77757 | GGTCAAAAATTAAAA GTGCC AAT GACAC CATTAGTAGAACCAA lytN 1309911 - 1311029 + | LytN protein TERM 1357 1311439 - 1311425 - g 72 -5.8 -4.35483 | TGGTAGGATAATAAA GAATTA TAA TAATTC AGTGATAGTAAAGAT fmhC(eprh) 1311057 - 1312301 + | FmhC protein SAV1249 1312474 - 1313346 + | DNA processing Smf protein TERM 1358 1313764 - 1313745 - g 93 -7.2 -5.54264 | AAACATGCAAAAAAA GCGAAAAA CGTC TTTCTCGC AAGTGACCCCGACCG SAV1250 1313526 - 1315595 + | DNA topoisomerase I gid 1315751 - 1317058 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1359 1318067 - 1318080 + G 79 -5.3 -5.093 | TTCAAACCAATTCAG TCATG CAAT CATGA TTTTCTTATTTTAAA xerC 1317476 - 1318372 + | site-specific recombinase XerC-like protein clpQ 1318369 - 1318914 + | ATP-dependent protease peptidase subunit TERM 1360 1320130 - 1320116 - g 77 -8.6 -3.63901 | overlap 1320114 ATTAATTAAACAATA TGAAGC ATT GCTTCA AACAGAAGAAGTTAC hslU 1318980 - 1320383 + | ATP-dependent protease ATP-binding subunit codY 1320408 - 1321181 + | transcriptional repressor CodY TERM 1361 1321252 - 1321285 + F 83 -6.9 -5.01422 | AGTAGTCAACTCAAC GAAATGACTTTGATG ATTA TGTTGAAGTCATTTC TTTATTTTTGTCTAA rpsB 1321528 - 1322295 + | 30S ribosomal protein S2 TERM 1362 1322332 - 1322358 + F 85 -7.5 -5.00616 | gap 1, opp_overlap 1322331 GATATAGTTTAAATG GGTGATAAG-AT ATTA ATGCTTATCACC TTTTTTAAAAAGAAA TERM 1363 1323331 - 1323314 - g 74 -5.5 -4.68424 | GAAGGTATGGAAAAA CGCGAAG AAAA CTTTGCG GATGAAGTTAAAGGA tsf 1322477 - 1323358 + | elongation factor Ts TERM 1364 1323580 - 1323564 - g 77 -5.2 -4.84359 | TTAGCTGGAGAAAAA GGATTT GGCAT AAATCC AGTAATTATTAAAAG smbA 1323495 - 1324217 + | uridylate kinase frr 1324236 - 1324790 + | ribosome recycling factor TERM 1365 1325030 - 1325055 + F 100 -7.7 -6.01187 | gap 1, opp_overlap 1325030 CATTTCTGGTGTAAA CTGTACC-GAGT CAG ACTTTGGTACAG TTTTTTTATTTGCTT TERM 1366 1325211 - 1325192 - g 70 -4.4 -4.78345 | AATAAATAAAAAGAA CACTATAA ATAA TTATAATG AAGAATTAGACTCGT uppS 1325163 - 1325933 + | undecaprenyl pyrophosphatase synthetase cdsA 1325940 - 1326722 + | phosphatidate cytidylyltransferase TERM 1367 1326752 - 1326788 + F 70 -6.1 -4.1585 | gap 1, opp_overlap 1326750 1326752 CAATAAACGTAAAGA GGAGTTGCTGAGAT AATTTAATGA ATCTCAG-AACTCC TTTTGAAAATTATAC SAV1262 1326934 - 1328220 + | putative zinc metalloprotease yluc proS 1328240 - 1329943 + | prolyl-tRNA synthetase TERM 1368 1332833 - 1332823 - g 73 -4 -5.08824 | CGTTTAGTTAAAAAA TCAT TAG ATGA TGGATACTTAGTTGG polC 1330201 - 1334517 + | DNA polymerase III PolC TERM 1369 1334777 - 1334759 - f 74 -8.8 -3.3785 | opp_overlap 1334759 TGAACTCAGGCAGAA GAGTGGGA GAT TCCCGCTC TTTTCTATTTGCCAA TERM 1370 1334759 - 1334777 + F 100 -11 -4.78848 | opp_overlap 1334759 TGAACTCAGGCAGAA GAGTGGGA GAT TCCCGCTC TTTTCTATTTGCCAA SAV1265 1334807 - 1335274 + | hypothetical protein nusA 1335295 - 1336470 + | transcription elongation factor NusA TERM 1371 1336519 - 1336507 - g 95 -4.1 -6.20267 | TGAAAAAGAAAAAAA TTCCG ATG CGAAA ATGTATTCTTTCAAA SAV1267 1336491 - 1336775 + | hypothetical protein SAV1268 1336772 - 1337089 + | ribosomal protein L7AE family protein infB 1337094 - 1339211 + | translation initiation factor IF-2 TERM 1372 1339250 - 1339302 + F 95 -11.8 -3.80862 | TATAGTTAAGATTGA TATGCTCCCTATAAA-TATTGCACTT TTT AAGTGTC-TACTTTATAGGGAGCATA TTTGATACTAGCTTT rbfA 1339597 - 1339947 + | ribosome-binding factor A truB 1340116 - 1341033 + | tRNA pseudouridine 5S synthase ribC 1341048 - 1342019 + | riboflavin kinase / FAD synthase rpsO 1342134 - 1342403 + | 30S ribosomal protein S15 TERM 1373 1342420 - 1342453 + F 100 -11.9 -4.1891 | CTTAATATAACGTCT TTGAGGTTGGGGCAT ATTT ATGTTCCAACCTTAA TTTATATTAAAAAAG TERM 1374 1342800 - 1342790 - g 70 -4 -4.87892 | TCTCAAGAAAAGAAA GTTT TTA AAAC TGAATGGGCAGGAAG pnpA 1342772 - 1344868 + | polynucleotide phosphorylase/polyadenylase TERM 1375 1344906 - 1344878 - f 76 -9.7 -2.88032 | opp_overlap 1344878, overlap 1344877 GAATAATATTTAAAG TCATATGACGACA ATG TATCGTCATGTGA TTTTTTTATGCCATT TERM 1376 1344878 - 1344906 + F 100 -9.7 -5.63504 | opp_overlap 1344877 1344878 GAATAATATTTAAAG TCATATGACGACA ATG TATCGTCATGTGA TTTTTTTATGCCATT TERM 1377 1345137 - 1345124 - g 79 -3.9 -5.47159 | TTTAATAAAGAAAAA GAATA AAGA TATTC GCATTATACCATTAG SAV1275 1345104 - 1346777 + | metallo-beta-lactamase family protein TERM 1378 1346831 - 1346843 + F 70 -6.3 -4.13911 | ACCGAAATATAATGG TTGTC ATG GACAA TTTACTTATATTTTA spoIIIE 1347034 - 1349400 + | sporulation-related protein SpoIIIE-like protein TERM 1379 1349495 - 1349471 - g 74 -5.7 -4.6951 | opp_overlap 1349470 ATTATGCAAAATAAA TTGGAATATGG TGA CCAACTTCCAA GTAATTTATCAATTG SAV1277 1349405 - 1350118 + | GntR family transcription regulator SAV1278 1350149 - 1351414 + | hypothetical protein TERM 1380 1352002 - 1352014 + G 71 -3.4 -5.18297 | overlap 1352006 GAAACGTTTTATCAT CCAT CAAAT ATGG TTTTATTTGTTGTTG SAV1279 1351414 - 1352700 + | processing proteinase SAV1280 1352700 - 1353404 + | putative 3-oxoacyl-acyl carrier protein reductase SAV1281 1353509 - 1354336 + | hypothetical protein SAV1282 1354355 - 1354747 + | hypothetical protein TERM 1381 1355257 - 1355273 + G 74 -5.2 -4.80959 | GGCAACATTGATTGG TTTGTC ATTAG GACAAA TTTTATTATACATTG pgsA 1354781 - 1355359 + | phosphatidylglycerophosphate synthase TERM 1382 1355373 - 1355400 + F 95 -7.9 -5.52384 | AAATATTTGTTTATA CTAGATTTCAT TTTCAT ATGGAATCTAG TTTTTTTAATCCCAA TERM 1383 1355452 - 1355466 + F 73 -5.8 -4.54301 | opp_overlap 1355452 1355454 TTGTTTATAATGATA TATTGT AAA ACAATA TTTGTTCATTTTTTA cinA 1355583 - 1356734 + | competence-damage inducible protein recA 1356899 - 1357942 + | recombinase A SAV1286 1358296 - 1359855 + | phosphodiesterase TERM 1384 1359862 - 1359887 + T 100 -9 -5.1925 | overlap 1359863 GCGAAATAATTTTTG TCTCCCTCAC AAATTA GTGAGGGAGC TTTTTTAAGTTGTAG TERM 1385 1359863 - 1359886 + T 100 -12.5 -3.70465 | overlap 1359862 CGAAATAATTTTTGT CTCCCTCAC AAATTA GTGAGGGAG CTTTTTTAAGTTGTA TERM 1386 1360117 - 1360089 - T 100 -17.7 -5.5604 | opp_overlap 1360082 1360092 1360097 CTAACCAATAAAAAA GAAGAGAAGATGT AAC ACATCTTCTCTTC TGCAATATTAATTAG TERM 1387 1360092 - 1360114 + T 100 -13.6 -3.37028 | opp_overlap 1360089, overlap 1360082 1360097 ACCAATAAAAAAGAA GAGAAGATGT AAC ACATCTTCTC TTCTGCAATATTAAT SAV1287 1360322 - 1360152 - | hypothetical protein TERM 1388 1360889 - 1360868 - g 70 -7.3 -3.89302 | ATTAATGATATTAAA CTTGCAGTT ATTA ATCTGCAAG GAAGAGCGTTTATGC SAV1288 1360541 - 1361338 + | hypothetical protein TERM 1389 1361398 - 1361429 + F 86 -7.4 -5.25772 | gap 1, opp_overlap 1361396 1361398 1361401, overlap 1361401 TATGAATTTAATATA GTACCACTG-TTTAC ATA GTAAATCGGTGGTTC TTTTTGTTATCATTT TERM 1390 1361401 - 1361426 + F 83 -7.7 -4.68512 | gap 1, opp_overlap 1361398 1361396 1361401, overlap 1361398 GAATTTAATATAGTA CCACTG-TTTAC ATA GTAAATCGGTGG TTCTTTTTGTTATCA SAV1289 1361478 - 1363238 + | putative 2-oxoacid ferredoxin oxidoreductase alpha subunit SAV1290 1363239 - 1364105 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TERM 1391 1364115 - 1364161 + F 100 -9.7 -5.27779 | opp_overlap 1364110 1364115 ATTTAATAATTAAAA CTGAGTCGTATAAATGTATTT ATAAC AGATCCATTTATGCTACTCAG TTTTTTACTATTACA TERM 1392 1364161 - 1364115 - f 73 -6 -4.56736 | opp_overlap 1364115, overlap 1364110 ATTTAATAATTAAAA CTGAGTCGTATAAATGTATTTA TAA CAGATCCATTTATGCTACTCAG TTTTTTACTATTACA SAV1291 1364199 - 1364492 + | hypothetical protein SAV1292 1364626 - 1366170 + | tRNA 2-methylthioadenosine synthase SAV1293 1366171 - 1366536 + | hypothetical protein SAV1294 1366563 - 1367054 + | hypothetical protein TERM 1393 1367481 - 1367465 - g 70 -8 -3.16055 | GAAATGTTTTATGAA GATGCC AAGGA GGCATC ACGTGTACTTGAAAT mutS 1367357 - 1369975 + | DNA mismatch repair protein TERM 1394 1370532 - 1370514 - g 77 -9.6 -3.05819 | overlap 1370517 CAGATATTGTCAATA GAATGGCT ATG AGCCATCC GGACATTCGAATAGC TERM 1395 1370529 - 1370517 - g 71 -7.7 -3.67052 | overlap 1370514 ATATTGTCAATAGAA TGGCT ATG AGCCA TCCGGACATTCGAAT TERM 1396 1370783 - 1370767 - g 70 -3.8 -4.85129 | ACGATACATTAAAAA CTTTAT GCTAA ATAAAG CGATTTTAGAAGGCT TERM 1397 1371320 - 1371306 - g 70 -7.2 -3.83771 | overlap 1371297 AAGAAATGGATCAAA CATTTG ATT CAAATG AGGATGCATCTGTGC mutL 1369988 - 1371997 + | DNA mismatch repair protein glpP 1372012 - 1372545 + | glycerol uptake operon antiterminator regulatory protein SAV1299 1372671 - 1372582 - | hypothetical protein TERM 1398 1372678 - 1372717 + H 84 -8.9 -4.24342 | gap 1, opp_overlap 1372674 1372671 1372669 AAATAACATAATTAG CACCTCTAAAACGATTAA AATCA TTAAA-GTTTTAGAGGTG TTTATTAGTAAAAAA glpF 1373020 - 1373838 + | glycerol uptake facilitator TERM 1399 1375381 - 1375371 - g 82 -5.4 -5.25772 | AAATTAGAAGAAAAA TTCG ATC CGAA AATGGATGAAGGCGA glpK 1373967 - 1375463 + | glycerol kinase TERM 1400 1375533 - 1375591 + F 100 -9.9 -4.95854 | gap 1, opp_overlap 1375533 ATTTGAATCGAGAAA CGAGAGATTTGTTCGAACATGTACAATT GAAG GATTGTTTATGTG-GGACAAGTCTCTCG TTTTTACATTTTTTA TERM 1401 1376065 - 1376054 - g 71 -3 -5.0666 | overlap 1376055 TATCTAAAAAAGAAA CTTT AGCT AAAG AACCATTAGTTAAAA TERM 1402 1376566 - 1376582 + G 70 -8.1 -3.19522 | opp_overlap 1376565 1376562 GAAGACAGAGACTAT TTAATCG ATG CGATTAA TTACATGTTCCCTAG glpD 1375573 - 1377294 + | aerobic glycerol-3-phosphate dehydrogenase TERM 1403 1377315 - 1377340 + F 95 -7.6 -5.60993 | opp_overlap 1377315 TTGTACAATCATAAA CTGGTGTCCT GTTTTA AGGGCATCAG TTTTTTTATACGAGA TERM 1404 1377987 - 1377973 - g 91 -4.3 -5.7946 | GTTTTAATAAAAAAA TACGT CCATT ACGTA CACAAAGTGATTGGA SAV1303 1377444 - 1378358 + | lysophospholipase miaA 1378376 - 1379311 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1405 1379457 - 1379440 - g 77 -8.5 -3.67597 | opp_overlap 1379432 GGTGTTATTGAAGAA TACGACA AGTA TGTCGTA AGCTTAAATTCTCAA SAV1305 1379326 - 1379559 + | host factor-1 TERM 1406 1379753 - 1379704 - T 100 -13.2 -5.06414 | gap 1, opp_overlap 1379704 TGTTTGTAATAAAAA CGCTTCATATAAAGGTCGAGTCA ATATA TGATACGAC-TTTATATGAAGCG TTTTATTTGCTATGA TERM 1407 1379704 - 1379753 + T 100 -15.4 -4.97158 | gap 1, opp_overlap 1379704 TGTTTGTAATAAAAA CGCTTCATATAAAGGTCGAGTCA ATATA TGATACGAC-TTTATATGAAGCG TTTTATTTGCTATGA bsaA 1380256 - 1379780 - | glutathione peroxidase SAV1307 1380368 - 1381606 + | GTP-binding protein proteinase modulator YnbA SAV1308 1381625 - 1382863 + | hypothetical protein glnR 1383106 - 1383474 + | glutamine synthetase repressor glnA 1383493 - 1384833 + | glutamine-ammonia ligase TERM 1408 1384869 - 1384893 + F 100 -9.3 -5.37593 | opp_overlap 1384869 AATCAGTAATATCAA GGGCTAGAGCG TTT TGCTTTAGCTC TTTTTTGATTTGGAA TERM 1409 1385247 - 1385231 - f 75 -4.5 -5.15682 | opp_overlap 1385231 AAAAGAGAAACAAAA CAAAAAA TAT CTTTTTG TTTATCGATCGGTAT TERM 1410 1386082 - 1386059 - f 100 -9.6 -4.56597 | TCGTTCTTTTAAAAA GGTAAAGGGC AAAA GACCTTTACC ACATTAAATAGGGAG TERM 1411 1386548 - 1386538 - f 81 -2.6 -5.7827 | opp_overlap 1386538 AATATAAATAAAAAA TTAT CAA ATAA TATAATATAGAATAT TERM 1412 1386620 - 1386601 - f 76 -2.9 -5.62045 | ATATATAATAAAAAA CCAATAC TATTAG GTATTAG TTTATGAATTAACAA SAV1311 1386728 - 1386934 + | hypothetical protein SAV1312 1388168 - 1388353 + | hypothetical protein SAV1313 1389097 - 1389348 + | hypothetical protein SAV1314 1390071 - 1390265 + | hypothetical protein TERM 1413 1390686 - 1390648 - T 78 -6.3 -4.74013 | gap 1, opp_overlap 1390653, overlap 1390653 TTTAAATATATAAAA TAAAACAAGATACT-CAA TAAT CTGTAGTATCTTGTTTTG GAATAATGTAATTTT TERM 1414 1390681 - 1390653 - T 82 -6.2 -5.24647 | gap 1, opp_overlap 1390653, overlap 1390648 ATATATAAAATAAAA CAAGATACT-CAA TAAT CTGTAGTATCTTG TTTTGGAATAATGTA SAV1315 1391834 - 1390809 - | hypothetical protein SAV1316 1392104 - 1392301 + | hypothetical protein TERM 1415 1392310 - 1392339 + F 91 -10.9 -3.85698 | overlap 1392314 TAAATAATATGATGT GAAAGGTGCAAAA TGTT TTTTGTGCCTTTC TTTATAGGAGAAAAG TERM 1416 1392314 - 1392335 + F 73 -5.9 -4.55295 | overlap 1392310 TAATATGATGTGAAA GGTGCAAAA TGTT TTTTGTGCC TTTCTTTATAGGAGA TERM 1417 1393079 - 1393064 - g 71 -3.2 -5.06585 | overlap 1393065 GAAATCATAGAAAAA TCATCG TAAT CGATGG TCAACTAGGTTATGT SAV1317 1392322 - 1393839 + | cardiolipin synthetase-like protein TERM 1418 1393852 - 1393872 + F 86 -6.1 -5.45802 | TAATTTATTTGTAAG GAGTCTCGA TTA TAGAGGCTC TTTTTATTTTGCCCA SAV1318 1394023 - 1394520 + | ABC transporter SAV1319 1394584 - 1394922 + | ABC transporter SAV1320 1394891 - 1395622 + | hypothetical protein TERM 1419 1395663 - 1395641 - g 71 -6.4 -4.17491 | ATGAAATTTTTAAAA GATACTTCAA TTG CTGAAATATC GTCTATACTTTATCT SAV1321 1395626 - 1396717 + | two-component sensor histidine kinase SAV1322 1396714 - 1397316 + | two-component response regulator SAV1323 1397617 - 1397429 - | hypothetical protein nuc 1397756 - 1398289 + | thermonuclease TERM 1420 1398376 - 1398431 + T 100 -9.4 -4.44548 | gap 1, opp_overlap 1398376 1398381 ATATAAAGAAATAAT TTAAAGGCATAATAA-CCATAGTGC GTATCGA GCGTAATGGATTATTATGCCTTTGA TTTTACTTGAATATA SAV1325 1399288 - 1398434 - | hypothetical protein TERM 1421 1399691 - 1399703 + G 74 -5.5 -4.69053 | AAATTTCACGGTGAA GTTGC CAT GCAGC TTTTCTTAAATGATG SAV1326 1399604 - 1400194 + | hypothetical protein TERM 1422 1400196 - 1400245 + T 73 -8.2 -3.51785 | gap 1, opp_overlap 1400201, overlap 1400201 CAATAAATAATTAAG AAAAAGCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGCTTTTA TATTAGTTTTTATCA TERM 1423 1400240 - 1400201 - T 93 -8.1 -5.23396 | gap 1, opp_overlap 1400201 1400196 AATAATTAAGAAAAA GCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGC TTTTATATTAGTTTT TERM 1424 1400201 - 1400240 + T 87 -8.1 -4.77629 | gap 1, opp_overlap 1400201, overlap 1400196 AATAATTAAGAAAAA GCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGC TTTTATATTAGTTTT SAV1327 1401630 - 1400248 - | aspartate kinase TERM 1425 1401470 - 1401485 + g 72 -6.2 -4.29905 | opp_overlap 1401470 1401469 ACCTTTTCATATAAT CTGATT AACA AATCAG TTGTTTTAATATCAT dhoM 1401821 - 1403101 + | homoserine dehydrogenase thrC 1403107 - 1404168 + | threonine synthase TERM 1426 1404209 - 1404226 + G 73 -7 -4.04576 | opp_overlap 1404209 1404207 ATTCCTGCATCAACA GCCAAC CTTGGA GTTGGC TTTGATTCTATAGGT thrB 1404170 - 1405084 + | homoserine kinase SAV1331 1405142 - 1405945 + | hypothetical protein TERM 1427 1406004 - 1405955 - T 70 -6 -4.26189 | gap 1, opp_overlap 1405958, overlap 1405958 TTATAAATTTTAAAA TAAGCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGCTTT TTATTTATGTGAAAA TERM 1428 1406001 - 1405958 - T 79 -7.7 -4.2354 | gap 1, opp_overlap 1405958, overlap 1405955 TAAATTTTAAAATAA GCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGC TTTTTATTTATGTGA TERM 1429 1405958 - 1406001 + T 100 -9.9 -5.42975 | gap 1, opp_overlap 1405955 1405958 TAAATTTTAAAATAA GCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGC TTTTTATTTATGTGA SAV1332 1406552 - 1406238 - | hypothetical protein TERM 1430 1406757 - 1406721 - R 100 -13.1 -4.79223 | overlap 1406722 TTACACCATTAAAAA GCGGCAAATGCTATAGA TAA TCTAAAGCATCTGCCGT GTAAGAAATTATTTA TERM 1431 1406756 - 1406722 - R 100 -16.6 -3.46811 | overlap 1406721 TACACCATTAAAAAG CGGCAAATGCTATAGA TAA TCTAAAGCATCTGCCG TGTAAGAAATTATTT SAV1333 1408224 - 1406770 - | gamma-aminobutyrate permease TERM 1432 1407011 - 1407036 + g 74 -5.5 -4.67552 | gap 1 AAAGGTGCTTTATAT GGT-AGGACCTT ATT AGGGTCTTGACC TTGTTTTTTAATAGC katA 1408422 - 1409945 + | catalase rpmG 1410036 - 1410185 + | 50S ribosomal protein L33 TERM 1433 1410221 - 1410251 + F 93 -8.2 -5.28826 | opp_overlap 1410221 CGATTTGAAAATAAA GCGGGCTTACCTAT TAT ATTGGGGAGCTCGC TTTTTTATGAAATTT TERM 1434 1410612 - 1410598 - f 75 -7.2 -4.08706 | opp_overlap 1410598 GTGTTATTATATAAA TCGTAA TAA TTACGA TTTGATAAAAAGTGA TERM 1435 1410598 - 1410612 + F 71 -7.2 -3.73224 | opp_overlap 1410598 GTGTTATTATATAAA TCGTAA TAA TTACGA TTTGATAAAAAGTGA rpsN 1410639 - 1410908 + | 30S ribosomal protein S14 TERM 1436 1410974 - 1411021 + F 79 -10.2 -2.90349 | opp_overlap 1410980, overlap 1410980 1411016 AGTATATACGAATGC TATAAACTGAATGTTTTCTCAT ATTA ATAAGGAAACATTCGGTTTTTA ATTTGCATTTAAAAA TERM 1437 1411015 - 1410980 - f 71 -7 -3.93236 | opp_overlap 1410980 1410974 TACGAATGCTATAAA CTGAATGTTTTCTCAT ATTA ATAAGGAAACATTCGG TTTTTAATTTGCATT TERM 1438 1410980 - 1411015 + F 100 -9.2 -5.01042 | opp_overlap 1410980, overlap 1410974 TACGAATGCTATAAA CTGAATGTTTTCTCAT ATTA ATAAGGAAACATTCGG TTTTTAATTTGCATT SAV1337 1411065 - 1412042 + | guanosine 5'-monophosphate oxidoreductase TERM 1439 1413014 - 1412990 - g 84 -5.9 -5.36441 | opp_overlap 1412990 TGGTCACAGAAAAAA TATTTTAAATG ATA CGTTTAAAATA TTAGGTGTTGGTGTT TERM 1440 1412990 - 1413014 + G 70 -8.1 -3.21464 | opp_overlap 1412990 TGGTCACAGAAAAAA TATTTTAAATG ATA CGTTTAAAATA TTAGGTGTTGGTGTT SAV1338 1412064 - 1413080 + | hypothetical protein TERM 1441 1413225 - 1413254 + T 100 -15.1 -4.65153 | opp_overlap 1413224 1413223 AAAAAATAATAATGG CTCGCTCCTGTAA ATTA TTACGGGGGCGAG TTTTAATTTGTGTAA TERM 1442 1413400 - 1413372 - T 100 -13.3 -5.14682 | TTAGAATAAATAAAA CCTCTTGAAAACG AAA CTTTTTCAAGAGG TCCAAAATTTATAAA lexA 1414083 - 1413460 - | LexA repressor SAV1340 1414226 - 1414459 + | hypothetical protein TERM 1443 1414473 - 1414502 + F 91 -5.1 -5.9003 | GATACATTGTCACAA CGTTATTTTGC CTATTTTT GCGAAATAGCG TTTTTTTATTACTTT SAV1341 1414596 - 1414835 + | hypothetical protein TERM 1444 1414876 - 1414894 + F 74 -3.2 -5.46706 | opp_overlap 1414878, overlap 1414878 GACATTATAACTTGA AATAAGTA TTT TACTTATC TTTTTATTTTAAAAT TERM 1445 1414878 - 1414892 + F 71 -5.8 -4.3613 | opp_overlap 1414878, overlap 1414876 CATTATAACTTGAAA TAAGTA TTT TACTTA TCTTTTTATTTTAAA tkt 1414956 - 1416944 + | transketolase TERM 1446 1416972 - 1417000 + F 83 -9 -4.1964 | overlap 1416975 AAGCGAGTATGTTTA GAAGTCTAGGAT GCATA ATCTTAGGCTTC TTTTAAAGTGTTGAA SAV1343 1417222 - 1417464 + | hypothetical protein TERM 1447 1417479 - 1417509 + F 100 -9.9 -4.91511 | gap 1, opp_overlap 1417477 1417481 AATTCGCAATTGATA GAGGCTATTTTCCA GATA TGGAAA-TGGCCTC TTTTTATAATCAAAT SAV1344 1417643 - 1418110 + | hypothetical protein SAV1345 1418234 - 1419355 + | exonuclease SbcD TERM 1448 1419890 - 1419876 - g 79 -8.6 -3.78436 | AAGGGATATTAAGAA CACTGT TTG ACAGTG AAAAATTTGAAGCTA TERM 1449 1420359 - 1420347 - g 76 -6.3 -4.59424 | AAATTGAAACTAAAA TTGCT AAT AGCAA AAAAGATATTTCTAA SAV1346 1419359 - 1422388 + | exonuclease SbcC mscL 1422821 - 1422459 - | large-conductance mechanosensitive channel TERM 1450 1423588 - 1423598 + G 71 -3.2 -5.11112 | TGATAAAGTAGAAGG TCCT ATT GGGA TTTTTATTGACGTTT opuD 1423025 - 1424671 + | glycine betaine transporter TERM 1451 1424741 - 1424698 - f 100 -12.8 -3.98745 | gap 1, opp_overlap 1424698, overlap 1424701 TAAGTATTTAAATAA CAAGTAGTATGTC-ATTCTAG TAG CTAGAACAGATATACTACTTG TTTGTTTTTGTGGAA TERM 1452 1424698 - 1424741 + F 100 -12.8 -4.96501 | gap 1, opp_overlap 1424698 1424701 TAAGTATTTAAATAA CAAGTAGTATGTC-ATTCTAG TAG CTAGAACAGATATACTACTTG TTTGTTTTTGTGGAA TERM 1453 1424738 - 1424701 - f 83 -8.7 -4.10744 | gap 1, opp_overlap 1424698, overlap 1424698 GTATTTAAATAACAA GTAGTATGTC-ATTCTAG TAG CTAGAACAGATATACTAC TTGTTTGTTTTTGTG TERM 1454 1425007 - 1425019 + F 90 -7.7 -5.1925 | opp_overlap 1425006 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG TERM 1455 1425129 - 1425113 - f 72 -8 -3.68024 | GGCCCCAACACAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA TERM 1456 1425191 - 1425168 - f 72 -6.8 -4.15222 | opp_overlap 1425174, overlap 1425170 1425174 ATGGGCCCCAACAAA GAGAAATTGG ATTC CCAATTTCTA CAGACAATGCAAGTT TERM 1457 1425189 - 1425170 - f 81 -9.4 -3.6761 | opp_overlap 1425174, overlap 1425168 1425174 GGGCCCCAACAAAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG citB 1425618 - 1428323 + | aconitate hydratase SAV1351 1428503 - 1428970 + | hypothetical protein SAV1352 1429473 - 1429177 - | hypothetical protein TERM 1458 1429834 - 1429796 - R 81 -5.5 -5.26119 | gap 1 TTTGCAAAAATAAAA TAATCCATCAACTGCAAA AAAA TATGCAAT-GATGGACTA ATGTCAAAAAATTGT SAV1353 1430457 - 1429849 - | hypothetical protein parE 1430657 - 1432654 + | DNA topoisomerase IV subunit B parC 1432654 - 1435056 + | DNA topoisomerase IV subunit A alsT 1435306 - 1436766 + | amino acid carrier protein TERM 1459 1436809 - 1436844 + F 100 -9.9 -4.40173 | opp_overlap 1436809 TAAAAATCAAATAAA CCCTGAGGTTTTC AAATTAAAGC GAAAATCTCAGGG TTTTAAATTTGTACT TERM 1460 1436844 - 1436809 - f 87 -8.4 -4.71307 | opp_overlap 1436809 TAAAAATCAAATAAA CCCTGAGGTTTTCA AATTAAAG CGAAAATCTCAGGG TTTTAAATTTGTACT glcT 1437266 - 1438117 + | transcription antiterminator SAV1358 1438164 - 1438259 + | hypothetical protein TERM 1461 1438849 - 1438823 - g 80 -10.2 -3.05536 | opp_overlap 1438816 1438824 AAACGATTGCTAATA TTGGCGTTGTGA TTG TCACAACACCAT TTGTACTATTCTTTA TERM 1462 1438824 - 1438848 + G 100 -11.5 -4.11081 | opp_overlap 1438823, overlap 1438816 AACGATTGCTAATAT TGGCGTTGTGA TTG TCACAACACCA TTTGTACTATTCTTT SAV1359 1438252 - 1439460 + | hypothetical protein fmtC 1439941 - 1442463 + | oxacillin resistance-related FmtC protein TERM 1463 1442470 - 1442512 + T 85 -5.7 -5.4387 | gap 1 CACAAATAATTAAAA TCCAAGTGCTAAGAGGTATA CAGT TATGCCTGA-AGCGCTTGGA TTTTTTGGTTTCTAT TERM 1464 1442546 - 1442588 + T 82 -7.9 -4.43012 | opp_overlap 1442548, overlap 1442548 GAATGATTTATAAAA AACGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCGTA TTTTAATATTGAAAT TERM 1465 1442548 - 1442586 + T 89 -10.5 -3.81853 | opp_overlap 1442548, overlap 1442546 ATGATTTATAAAAAA CGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCG TATTTTAATATTGAA TERM 1466 1442586 - 1442548 - T 100 -12.7 -5.28778 | opp_overlap 1442548 1442546 ATGATTTATAAAAAA CGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCG TATTTTAATATTGAA msrA 1443175 - 1442666 - | methionine sulfoxide reductase A msrR 1443312 - 1444295 + | peptide methionine sulfoxide reductase regulator TERM 1467 1444351 - 1444293 - T 100 -15 -2.51547 | opp_overlap 1444299 1444303, overlap 1444303 TTTTTAGATGAAGAT TAAAAATAAACAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTGTTCGTTTTCA AAGAATTAATTGGCA TERM 1468 1444299 - 1444345 + T 100 -14 -4.09739 | opp_overlap 1444293 1444303, overlap 1444303 GATGAAGATTAAAAA TAAACAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTGTTCG TTTTCAAAGAATTAA TERM 1469 1444341 - 1444303 - T 100 -14.8 -4.95618 | opp_overlap 1444303 1444299, overlap 1444293 AAGATTAAAAATAAA CAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTG TTCGTTTTCAAAGAA TERM 1470 1444303 - 1444341 + T 100 -17 -3.66908 | opp_overlap 1444293 1444303, overlap 1444299 AAGATTAAAAATAAA CAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTG TTCGTTTTCAAAGAA SAV1363 1444571 - 1444383 - | 4-oxalocrotonate tautomerase TERM 1471 1444409 - 1444427 + g 78 -7.4 -4.25325 | ACTTTCTTACGCCAG CCACACCA TAA TGGTTTGG TTTCATTTCTTCTAT SAV1364 1444716 - 1445978 + | DNA-damage repair protein tyrA 1447206 - 1446115 - | prephenate dehydrogenase SAV1366 1447371 - 1448402 + | simila to deblocking aminopeptidase TERM 1472 1448613 - 1448659 + F 73 -3.9 -5.27335 | gap 1 TATGTTAACTAAGGT GGCACCACGGTAACGCGT CCTTACAGGTAT ATGCGTTAT-GTGGTGTC TTTTTATTTAGACAA TERM 1473 1448835 - 1448871 + F 100 -13.2 -5.00616 | gap 1, overlap 1448832 TTTAGGTGGTACCAC GCGTCAGCGTCCTTTAT ATTG AT-AAGGATGCTGGCGC TTTTTTGAAAGGAGC TERM 1474 1450091 - 1450116 + G 75 -9.9 -2.76171 | gap 1, opp_overlap 1450091 1450090, overlap 1450085 ATATATGAACAATAT CCAC-ATAAACG AGG CGTTTATAGTGG TGGTGTTGGATACAT TERM 1475 1450116 - 1450091 - g 75 -9.9 -2.68109 | gap 1, opp_overlap 1450085 1450091, overlap 1450090 ATATATGAACAATAT CCAC-ATAAACG AGG CGTTTATAGTGG TGGTGTTGGATACAT SAV1367 1448894 - 1450300 + | anthranilate synthase component I trpG 1450297 - 1450863 + | anthranilate synthase component II TERM 1476 1451224 - 1451200 - g 70 -4.3 -4.6759 | overlap 1451190 1451189 AACATGGTAATAAAA GTATTACCTCA AAT TCAGGTAGTAC GGATTTGTTAAATCA trpD 1450869 - 1451867 + | anthranilate phosphoribosyltransferase trpC 1451869 - 1452651 + | indole-3-glycerol-phosphate synthase TERM 1477 1452711 - 1452727 + G 70 -7.3 -3.80858 | opp_overlap 1452711 GCGGCCAGTCAATTA CCTATTG ATG CGATAGG TTTCATCCATTATGA trpF 1452651 - 1453283 + | phosphoriborylanthranilate isomerase trpB 1453276 - 1454490 + | tryptophan synthase subunit beta TERM 1478 1454999 - 1454973 - g 72 -8 -3.37464 | overlap 1454975 CGATGAATGCGACAA CAGGACAAAACG GTG CGTTTCATCCAG AATTAAAACGAAAAA TERM 1479 1454997 - 1454975 - g 77 -9.2 -3.25459 | overlap 1454973 ATGAATGCGACAACA GGACAAAACG GTG CGTTTCATCC AGAATTAAAACGAAA trpA 1454483 - 1455211 + | tryptophan synthase subunit alpha TERM 1480 1455299 - 1455330 + F 76 -3.9 -5.48303 | opp_overlap 1455294 1455299 AGAAATGATACAAAA GTAATATGAGC AAACCCAAAC GTTCATATTAC TTTTTTTGAAATTGT femA 1455533 - 1456795 + | factor essential for expression of methicillin resistance TERM 1481 1457038 - 1457049 + G 70 -4.4 -4.70879 | CTATTCGAATCGTGG TCCA GTAA TGGA TTTTTCAGATTTAGG femB 1456814 - 1458073 + | FemB protein TERM 1482 1458089 - 1458117 + F 86 -6.1 -5.47914 | ATGTAAATGATGTTA GGGCTTATAGT TATTGAT ACTATAGGCTC TTTTTTATGCTTTTT SAV1376 1458362 - 1459108 + | hypothetical protein TERM 1483 1459123 - 1459112 - f 71 -3 -5.27335 | TGTGTTAAATAAAAA GTTA ATAG TAAC TACAAACATACTTTA SAV1377 1459338 - 1460105 + | hypothetical protein TERM 1484 1460155 - 1460103 - T 100 -12.3 -4.20797 | opp_overlap 1460109 1460110 1460111 1460151, overlap 1460108 1460111 TTAAAATCATATAAA TAAAAGCACCCCTATCAAATGATAA TCA TTATCAATCGATAGGGGCTATTTTA ATAAAATTCGTCCTC TERM 1485 1460150 - 1460108 - T 90 -7.8 -5.06016 | opp_overlap 1460109 1460110 1460111, overlap 1460103 1460111 ATCATATAAATAAAA GCACCCCTATCAAATGATAA TCA TTATCAATCGATAGGGGCTA TTTTAATAAAATTCG TERM 1486 1460110 - 1460148 + T 89 -10.4 -3.74158 | opp_overlap 1460108 1460103 1460111, overlap 1460109 1460111 CATATAAATAAAAGC ACCCCTATCAAATGATAA TCA TTATCAATCGATAGGGGC TATTTTAATAAAATT TERM 1487 1460147 - 1460111 - T 100 -16.1 -3.36868 | opp_overlap 1460110 1460109 1460111, overlap 1460108 1460103 ATATAAATAAAAGCA CCCCTATCAAATGATAA TCA TTATCAATCGATAGGGG CTATTTTAATAAAAT TERM 1488 1460111 - 1460147 + T 100 -13.9 -2.83772 | opp_overlap 1460111 1460108 1460103, overlap 1460110 1460109 ATATAAATAAAAGCA CCCCTATCAAATGATAA TCA TTATCAATCGATAGGGG CTATTTTAATAAAAT SAV1378 1460626 - 1460153 - | hypothetical protein SAV1379 1461451 - 1460750 - | oligopeptide transporter ATPase subunit SAV1380 1462217 - 1461444 - | oligopeptide transport ATPase TERM 1489 1461863 - 1461841 - G 93 -11.4 -3.99405 | opp_overlap 1461835 1461840 1461838 1461841 TTAACCCACGACAAA GCCTTGTCAA TTT TTGACAAAGC CTCTTCTTTACTACT TERM 1490 1461841 - 1461863 + g 72 -9.2 -2.75471 | opp_overlap 1461841, overlap 1461835 1461840 1461838 TTAACCCACGACAAA GCCTTGTCAA TTT TTGACAAAGC CTCTTCTTTACTACT SAV1381 1463034 - 1462204 - | oligopeptide transporter permease TERM 1491 1462668 - 1462657 - G 76 -4.4 -5.02476 | overlap 1462659 AGATGGTTGAAAAAA GCTT GCTA AAGC AATCATGATGATAAA SAV1382 1464013 - 1463027 - | oligopeptide transporter permease TERM 1492 1463898 - 1463923 + g 85 -9.1 -3.91911 | opp_overlap 1463905 TCAAGATGTAATATT TTATCAACAGG ATTG CCTGGTGATAA TTTCATTAAAATGAA TERM 1493 1464030 - 1464046 + r 74 -5.1 -4.89063 | ATAGTCCCCCTCCTT GTGTAAG TTA CTAACAC TTTCTTTTTACATGA SAV1383 1464661 - 1464317 - | hypothetical protein TERM 1494 1464913 - 1464895 - g 72 -8.2 -3.41292 | opp_overlap 1464897, overlap 1464893 ACCTTTAAGAGAAGA TGTTCCTG TTT CAGAAACA TGGGATTTAGTAGAC TERM 1495 1465965 - 1465978 + G 74 -5.3 -4.68209 | CAAGTCCATACTTTA CACAT TCAT ATGTG TTTATTTCTTGGACT TERM 1496 1466547 - 1466531 - g 77 -5.1 -5.18561 | GAAACATTGAAAAAA GGTGGTA GTG TATCACC TGTCGAACTTGCAAA SAV1384 1464866 - 1466680 + | oligoendopeptidase TERM 1497 1466749 - 1466714 - T 100 -10.6 -4.37544 | opp_overlap 1466714 GTAGAACAATATAAA CCAAGATTTTCACATT ACTA ATTGTGAGAATCTTGG TTTTTTTGAGGGTTT TERM 1498 1466714 - 1466749 + T 100 -12.8 -5.4477 | opp_overlap 1466714 GTAGAACAATATAAA CCAAGATTTTCACATT ACTA ATTGTGAGAATCTTGG TTTTTTTGAGGGTTT SAV1385 1467461 - 1466820 - | negative regulator PhoU TERM 1499 1466868 - 1466858 - G 71 -3.2 -5.12987 | TTAAATAAAAATAAA CACT TTC AGCG ATGTTAATAATATGA pstB 1468319 - 1467468 - | phosphate ABC transporter SAV1387 1469283 - 1468366 - | phosphate ABC transporter permease SAV1388 1470211 - 1469285 - | phosphate ABC transporter SAV1389 1471385 - 1470402 - | thioredoxine reductase TERM 1500 1471631 - 1471686 + H 82 -8.7 -3.91032 | gap 1, opp_overlap 1471638, overlap 1471638 GGGACATAAATCCCT AAAAAAACAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTGTTCTCTA TTTATACAATACTTC TERM 1501 1471679 - 1471638 - H 100 -15.6 -5.4477 | gap 1, opp_overlap 1471638 1471631 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1502 1471638 - 1471679 + H 100 -15.6 -3.80279 | gap 1, opp_overlap 1471638, overlap 1471631 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1503 1471825 - 1471841 + H 72 -8 -3.68024 | GGCACATTGTTGTAA GCTGAC TATAT GTCAGC TTCTGTGTTGGGGCC TERM 1504 1471999 - 1471986 - g 84 -3.9 -5.75822 | CAGAAACGAAAAAAA TCTAT AGTC ATAGA AAAATTTATGTAGAG TERM 1505 1472149 - 1472130 - g 74 -5.8 -4.56314 | gap 1, opp_overlap 1472133, overlap 1472132 1472133 1472135 TTAATATAAGGAAAA TAGCAGCTC AAC GAGCTG-TA CATTATAAAATACAT TERM 1506 1472133 - 1472147 + G 75 -10 -2.60079 | opp_overlap 1472132 1472130 1472133 1472135 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1507 1472147 - 1472133 - g 76 -10 -2.91057 | opp_overlap 1472133, overlap 1472132 1472130 1472135 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1508 1472207 - 1472174 - g 100 -9.1 -5.25893 | opp_overlap 1472174 ATACATATCAAAAAA GCTAATTTCCATCAA ATAA TTAATAGAAATCAGC TTTTTTACATTGCCT SAV1390 1471928 - 1472224 + | putative transposase TERM 1509 1472350 - 1472331 - T 86 -6.4 -5.48063 | ATTGAATATAAAAAA CACGCATC CTAC GACACGTG TAAAAATGATTATTC SAV1391 1473262 - 1472360 - | hypothetical protein SAV1392 1473409 - 1475010 + | ABC transporter TERM 1510 1475244 - 1475271 + F 78 -9.9 -3.16619 | overlap 1475242 1475240 ATATAACATTGCAGG GTCTAGGGCAT TGATTC ATGCCCGAGAC TATATTCAATTTAAT TERM 1511 1475325 - 1475380 + F 82 -8.7 -3.91032 | gap 1, opp_overlap 1475332, overlap 1475332 GGGACATAAATCCCT AAAAAAACAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTGTTCTCTA TTTATACAATACTTC TERM 1512 1475332 - 1475373 + F 100 -15.6 -3.80279 | gap 1, opp_overlap 1475332, overlap 1475325 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1513 1475373 - 1475332 - f 100 -15.6 -5.4477 | gap 1, opp_overlap 1475325 1475332 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1514 1476001 - 1476027 + F 100 -11.7 -5.97979 | opp_overlap 1476001 1476004 1476007 TTGTATATAGATTAA GAGCAAGTTCG CATTC CGAACTTGTTC TTTTTTTATTATTGT TERM 1515 1476027 - 1476001 - f 78 -9.5 -3.35197 | opp_overlap 1476001, overlap 1476004 1476007 TTGTATATAGATTAA GAGCAAGTTCG CATTC CGAACTTGTTC TTTTTTTATTATTGT TERM 1516 1476024 - 1476004 - f 75 -9.8 -2.54059 | opp_overlap 1476001, overlap 1476001 1476007 TATATAGATTAAGAG CAAGTTCG CATTC CGAACTTG TTCTTTTTTTATTAT lysC 1476072 - 1477277 + | aspartate kinase asd 1477341 - 1478330 + | aspartate semialdehyde dehydrogenase dapA 1478332 - 1479219 + | dihydrodipicolinate synthase dapB 1479216 - 1479938 + | dihydrodipicolinate reductase dapD 1479965 - 1480684 + | tetrahydrodipicolinate acetyltransferase TERM 1517 1480710 - 1480735 + F 81 -8.4 -4.18213 | GTATAATAATTTCAA GGTTGAGATA CGATTA TGTCTCAACC TTATTGTTTATCATT SAV1398 1480827 - 1481978 + | hippurate hydrolase SAV1399 1481983 - 1483068 + | alanine racemase 2 lysA 1483058 - 1484323 + | diaminopimelate decarboxylase TERM 1518 1484338 - 1484376 + T 77 -5.9 -4.93318 | opp_overlap 1484339, overlap 1484339 AAAATAAACAAAGTA ATCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGAA TTTTTATGCATTATA TERM 1519 1484339 - 1484375 + T 81 -9.4 -3.54906 | opp_overlap 1484339, overlap 1484338 AAATAAACAAAGTAA TCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGA ATTTTTATGCATTAT TERM 1520 1484375 - 1484339 - T 95 -11.6 -3.8293 | opp_overlap 1484339 1484338 AAATAAACAAAGTAA TCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGA ATTTTTATGCATTAT SAV1401 1484964 - 1484563 - | hypothetical protein TERM 1521 1485073 - 1485048 - R 83 -3.4 -5.71712 | gap 1, overlap 1485051 GGTGATATAAAAAAA GAG-TTCTCAA TTTGG CTGAGAAACTC ATCGCGTTAAGTATT TERM 1522 1485129 - 1485108 - R 100 -8.8 -5.05079 | opp_overlap 1485108 ATAAGCATATAAAAA CACCTTAC TTCTTG GTAAGGTG TTAGTTAAAATCAAT TERM 1523 1485108 - 1485129 + r 78 -9.5 -3.35992 | opp_overlap 1485108 ATAAGCATATAAAAA CACCTTACT TCTT GGTAAGGTG TTAGTTAAAATCAAT cspA 1485361 - 1485161 - | major cold shock protein SAV1403 1485840 - 1485532 - | hypothetical protein SAV1404 1486003 - 1486272 + | putative acylphosphatase SAV1405 1486297 - 1486920 + | hypothetical protein SAV1406 1486952 - 1488088 + | tellurite resisrance protein (e-140,65%,86%,378-376) TERM 1524 1488108 - 1488151 + T 73 -8.4 -3.52841 | gap 1, opp_overlap 1488113, overlap 1488113 CGAATTAGATATAAC AAAAAGGAAGCATCCTACGAT TAA ATTGGAG-ATGCTTCCTTTTA TATTATTCGTTATTC TERM 1525 1488146 - 1488113 - T 82 -6.1 -5.27206 | gap 1, opp_overlap 1488108 1488113 TAGATATAACAAAAA GGAAGCATCCTACGAT TAA ATTGGAG-ATGCTTCC TTTTATATTATTCGT TERM 1526 1488113 - 1488146 + T 87 -8.3 -4.80656 | gap 1, opp_overlap 1488113, overlap 1488108 TAGATATAACAAAAA GGAAGCATCCTACGAT TAA ATTGGAG-ATGCTTCC TTTTATATTATTCGT braB 1489504 - 1488161 - | branched-chain amino acid carrier protein TERM 1527 1488910 - 1488894 - G 72 -5.1 -4.71382 | opp_overlap 1488904, overlap 1488895 ACAATCATTGAAAAA GCAATTG CTG CAATGGC ATCCATTGTTAAATA TERM 1528 1488904 - 1488918 + g 71 -8.6 -3.08471 | opp_overlap 1488894 1488895 AAAAAGCAATTGCTG CAATGG CAT CCATTG TTAAATAGCCTTGTG SAV1408 1491616 - 1489730 - | hypothetical protein TERM 1529 1489982 - 1489961 - G 82 -8.7 -4.02108 | TTGACTATAATTAAA TGCAGACGG TTCG CCGTCTGAA AATACGATTAAAAAT SAV1409 1492421 - 1491630 - | nitric-oxide reductase SAV1410 1492805 - 1492602 - | hypothetical protein SAV1411 1493643 - 1492834 - | hypothetical protein TERM 1530 1494170 - 1494124 - R 70 -4 -4.98911 | gap 1, opp_overlap 1494127, overlap 1494125 1494127 CATTATAAAAATAAA GTACAGCAGTAAGAT-ATTTC GACTAG AAAATAATCTTACTGCTGTTT GTTATTGATTTGATT TERM 1531 1494167 - 1494127 - R 80 -10.1 -3.34078 | gap 1, opp_overlap 1494127, overlap 1494125 1494124 TATAAAAATAAAGTA CAGCAGTAAGAT-ATTTC GACTAG AAAATAATCTTACTGCTG TTTGTTATTGATTTG TERM 1532 1494127 - 1494167 + r 100 -9.4 -4.54404 | gap 1, opp_overlap 1494125 1494124 1494127 TATAAAAATAAAGTA CAGCAGTAAGA-TATTT CGACTAGA AAATAATCTTACTGCTG TTTGTTATTGATTTG odhB 1495491 - 1494223 - | dihydrolipoamide acetyltransferase TERM 1533 1494255 - 1494272 + g 71 -5.7 -4.59773 | AGTCTTCTGGGTTTT CAATTAA TTCT TTAATTG TTTTTAAGAATCCAA TERM 1534 1494854 - 1494873 + g 84 -6.6 -5.02476 | GTTAACATAGCTGTA TTATTAGA TACC TCTAATAA TTTTTTGGCAGCTGT kgd 1498303 - 1495505 - | alpha-ketoglutarate decarboxylase TERM 1535 1497351 - 1497365 + g 77 -8.6 -3.62597 | opp_overlap 1497350 ACAGGTGCAACAATT TCCAAG TGA CTTGGA TTGTTAGCCAGTGCA TERM 1536 1497445 - 1497427 - G 70 -8.2 -3.18681 | TTTTAATGCCACCAA GGTGATAT TTC ACATCACC AGTCCATCCAGCAGT TERM 1537 1498259 - 1498285 + g 77 -5.3 -5.00851 | gap 1, opp_overlap 1498251, overlap 1498251 ACCTAAATTCGCACC GAAGTTTACAGG AGCC TCTG-AAACTTC TTTTCTTTCGTTAGT TERM 1538 1498428 - 1498401 - R 100 -12.2 -4.58395 | opp_overlap 1498401 1498404 1498407 TTTATCTGCTAAAAA GAAGAATCAACA AAAG CGTTGATTCTTC TAGGTTTATAGATGT TERM 1539 1498401 - 1498428 + r 85 -11.5 -2.71593 | opp_overlap 1498401, overlap 1498404 1498407 TTTATCTGCTAAAAA GAAGAATCAAC AAAAGC GTTGATTCTTC TAGGTTTATAGATGT arlS 1499942 - 1498587 - | putative protein histidine kinase truncated-arlR 1500598 - 1499939 - | truncated (putative response regulator) SAV1416 1501269 - 1501069 - | hypothetical protein TERM 1540 1501330 - 1501373 + r 100 -8.4 -5.66989 | gap 1, opp_overlap 1501335 TATAACAACGTTTTA TAAAAGCAGTAAACCCTTACG ACA CTTTA-GGTTTACTGCTTTTG TTTTTTTACTATTTA TERM 1541 1501368 - 1501335 - R 74 -6.1 -4.386 | gap 1, opp_overlap 1501330 CAACGTTTTATAAAA GCAGTAAACCCTTACG ACA CTTTA-GGTTTACTGC TTTTGTTTTTTTACT SAV1417 1502000 - 1501386 - | hypothetical protein murG 1503087 - 1502017 - | N-acetylglucosaminyl transferase SAV1419 1503608 - 1503099 - | hypothetical protein TERM 1542 1503758 - 1503748 - R 70 -4 -4.85618 | AAATAACCAATAAAA GTAT CAT ATAC CAATTAATCGATTGT TERM 1543 1503968 - 1503920 - R 100 -9.2 -5.09204 | opp_overlap 1503924 1503926, overlap 1503924 AGACGTCAATAAAAA TAAACACGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCGTGTC-A TTAACATAATAATAA TERM 1544 1503965 - 1503924 - R 100 -14.7 -5.05606 | gap 1, opp_overlap 1503924 1503926, overlap 1503920 GTCAATAAAAATAAA CACGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCGTG TCATTAACATAATAA TERM 1545 1503924 - 1503965 + r 100 -12.5 -2.74012 | gap 1, opp_overlap 1503920 1503924, overlap 1503926 GTCAATAAAAATAAA CACGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCGTG TCATTAACATAATAA TERM 1546 1503926 - 1503963 + r 75 -9.3 -2.91452 | gap 1, opp_overlap 1503924 1503920, overlap 1503924 CAATAAAAATAAACA CGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCG TGTCATTAACATAAT ctpA 1505498 - 1504008 - | carboxy-terminal processing proteinase TERM 1547 1505668 - 1505630 - R 85 -10.5 -3.60627 | overlap 1505636 TTAGTTTATTTTAAA TTAAAACCAGGATAACG AATTG CATCACCCTGGTTCTAA CTATTATTTTTAAAA TERM 1548 1505662 - 1505636 - R 81 -7.3 -4.55798 | overlap 1505630 TATTTTAAATTAAAA CCAGGATAACG AATTG CATCACCCTGG TTCTAACTATTATTT SAV1421 1505911 - 1505690 - | hypothetical protein SAV1422 1506411 - 1505911 - | glucose-specific enzyme II, PTS system A component SAV1423 1506851 - 1506423 - | methionine sulfoxide reductase B SAV1424 1507377 - 1506844 - | methionine sulfoxide reductase A SAV1425 1508302 - 1507463 - | hypothetical protein dfrA 1508796 - 1508317 - | dihydrofolate reductase thyA 1509952 - 1508996 - | thymidylate synthase SAV1428 1510813 - 1510376 - | hypothetical protein SAV1429 1511953 - 1510829 - | hypothetical protein TERM 1549 1511094 - 1511116 + g 72 -9.2 -2.52946 | overlap 1511093 1511100 TCGCTTATGCAATCC CCTGCTGT TCTTCTT ACAGCAGG ACTTTTATCACGAAG SAV1430 1512242 - 1511991 - | hypothetical protein SAV1431 1512439 - 1512254 - | hypothetical protein SAV1432 1512693 - 1513397 + | hypothetical protein TERM 1550 1513559 - 1513575 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 1551 1513623 - 1513611 - f 90 -7.7 -5.1925 | opp_overlap 1513610 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT TERM 1552 1513771 - 1513798 + F 90 -7.8 -5.18357 | AGCGAGTATTTTAAA CACGTGTTACTT ATTT AAGTGATGCGTG TTTTTTAATGGATTA SAV1433 1513880 - 1514281 + | cell wall enzyme EbsB TERM 1553 1514280 - 1514322 + T 89 -10.6 -3.85698 | opp_overlap 1514284, overlap 1514282 1514284 TTAAAAAGAATAAAT AAAAGGAGCACCGACTGATG TGA TGTCAATCGGTGCTCCTCTA TTTATCAAAGAAACA TERM 1554 1514282 - 1514320 + T 100 -13.2 -3.51934 | opp_overlap 1514284, overlap 1514280 1514284 AAAAAGAATAAATAA AAGGAGCACCGACTGATG TGA TGTCAATCGGTGCTCCTC TATTTATCAAAGAAA TERM 1555 1514318 - 1514284 - T 100 -16.6 -5.20331 | opp_overlap 1514284 1514282 1514280 AAAGAATAAATAAAA GGAGCACCGACTGA TGTGATG TCAATCGGTGCTCC TCTATTTATCAAAGA TERM 1556 1514284 - 1514318 + T 100 -15.8 -3.3353 | opp_overlap 1514284, overlap 1514282 1514280 AAAGAATAAATAAAA GGAGCACCGACTGATG TGA TGTCAATCGGTGCTCC TCTATTTATCAAAGA ebhA 1534481 - 1514340 - | hypothetical protein TERM 1557 1519267 - 1519283 + g 72 -5.1 -4.72486 | overlap 1519269 TTTGCATTTTGAACT GCTGCTT GGT AAGCATC TTTTTGCGGTTTATC TERM 1558 1519645 - 1519661 + g 72 -5.1 -4.72486 | overlap 1519647 TTTGCATTTTGAACT GCTGCTT GGT AAGCATC TTTTTGCGGTTTATC TERM 1559 1521523 - 1521533 + g 74 -6.8 -4.37157 | ATGATATTATTAGCA GCTG TTA CAGC TTTGTTATAGTCATT TERM 1560 1523749 - 1523760 + g 70 -4.4 -4.73617 | TGAATTGTATTTGGA TCCA TTGT TGGA TTTGTTGTTTGTTTT TERM 1561 1528878 - 1528898 + g 70 -3.9 -4.92314 | ATGCGTTGCACCTTC GATTTGGCG TTT CGCTGCATC TTTTTGTGCATTAGT TERM 1562 1529079 - 1529091 + g 73 -7.7 -3.87538 | overlap 1529081 1529084 AATGATTGCTTTTGC TGCAG TGA CTGCA TTGTTGTAGTCATTT TERM 1563 1529084 - 1529103 + g 89 -7.2 -5.26247 | overlap 1529079 1529081 TTGCTTTTGCTGCAG TGACTGCA TTGT TGTAGTCA TTTTGTTTGTTTTGA TERM 1564 1529313 - 1529325 + g 73 -4.1 -4.9138 | opp_overlap 1529313 AGTTAAACCATCAAT TGCTG TGT TAGCA TTTTGTTTCGCTACT TERM 1565 1530465 - 1530480 + g 78 -7.6 -4.0896 | GTTTTTCGCTGTTGT CTTAGC TTGA GCTAAG TTTTGCGCACCATTT TERM 1566 1531523 - 1531542 + g 89 -9.4 -4.12226 | overlap 1531521 1531526 CATTTTGCGCTTGTT CAACTTGA TGCT TCAAGTTG TCTTTTTGTAATTGT ebhB 1546214 - 1534542 - | hypothetical protein TERM 1567 1535504 - 1535530 + g 70 -4.4 -4.72497 | TTAAAATATCTTTCG CAGCTTGCAC CGCATTT GTGTATGCTG TTTTCTTACTAGGTG TERM 1568 1536490 - 1536501 + g 72 -5.8 -4.39107 | TTTAAATCACTTGCA TGCG TAAT CGCA TTTGTTGCTTCTGTT TERM 1569 1538201 - 1538213 + g 70 -4.1 -4.80882 | ATGCTGTTAATGCGT TATCG ACA CGATG TTTTTCATCTGAAAT TERM 1570 1538449 - 1538465 + g 73 -7.3 -3.96298 | overlap 1538449 GCTTGATCAATCTTA GTTTGTG CTG CACGAAC TTTAGTTAGTGCGTC TERM 1571 1539557 - 1539577 + g 71 -7.5 -3.55524 | overlap 1539532 CAATTGTAATCGCTC CTGCCGCTG TTT CAGTGACAG TTGGTTTCGCTGGTT TERM 1572 1540374 - 1540389 + g 74 -6.2 -4.5032 | AGAAGCACTATCATT TGAATC AACA GATTCA TTTCTTGTTACTGTA TERM 1573 1544131 - 1544120 - G 77 -5.8 -4.6645 | opp_overlap 1544119 1544120 CATATACATAGAAAA CTGG ATGC CCAG CTTGTTTTGAAAATG TERM 1574 1546553 - 1546511 - R 90 -6.6 -5.54885 | gap 1 AAGAGTAATAAAAAA CCAATCCCTATGT-TCATT TAAAAT AATGACACATAAGAATCGG TTTATATTTTTGTTT TERM 1575 1546604 - 1546622 + r 74 -9 -3.21914 | overlap 1546602 GATTTCAATTTAATT CTCAATTA TCA TAATTGAG TGTCGTTTTGTTTAG SAV1436 1548003 - 1546612 - | major facilitator transporter TERM 1576 1547844 - 1547828 - G 72 -5.1 -4.65263 | ATTCCTGAAAATAAA GCAGTTA TAC TAACGGC GATATTAACCGTTCC TERM 1577 1548062 - 1548033 - R 95 -10.2 -4.10657 | opp_overlap 1548033 1548035 CTATACTTTTGAAAA CAGACAAATTCC ATAACA GAAATTTGTCTG TTCGATAGAATAATT SAV1437 1549481 - 1548159 - | amino acid permease family protein TERM 1578 1548325 - 1548339 + g 73 -7.2 -3.95042 | TATAACGGTACTTTA TATGGA CGC TCCATA TTTGGTTCACGTTTT TERM 1579 1549273 - 1549292 + g 74 -9.3 -3.01712 | overlap 1549271 CCTGTTTCAGGGATT GCAGCAG CAAGTT CTGCTGC TGTTAACCCCGCACA SAV1438 1550552 - 1549512 - | threonine dehydratase SAV1439 1551765 - 1550647 - | alanine dehydrogenase TERM 1580 1551786 - 1551803 + r 79 -7.1 -4.40732 | overlap 1551781 1551793 ACACTCCTCTTTCAT TTGTGAA TAAT TTCACAA TTATTTTATCCTTTG TERM 1581 1552194 - 1552162 - R 100 -10.1 -4.77986 | opp_overlap 1552162 CCAAATACGCAAAAA GACTATTTCTACC TTGCATC GATAGAAATAGTC TTTTTATACTTAATT TERM 1582 1552162 - 1552194 + r 88 -7.9 -5.00765 | opp_overlap 1552162 CCAAATACGCAAAAA GACTATTTCTACC TTGCATC GATAGAAATAGTC TTTTTATACTTAATT SAV1440 1553119 - 1552241 - | putative 5'-3' exonuclease SAV1441 1556579 - 1553139 - | hypothetical protein TERM 1583 1553238 - 1553206 - G 71 -7.9 -3.64822 | opp_overlap 1553205 1553211 1553217 AGTGTTGTATCTAAA TCAAATGCTAATAAA TCG TTTATTTGCGTTTGA ATATTAGCTTCAAAA SAV1442 1556883 - 1558223 + | sulfite reductase [NADPH] flavoprotein SAV1443 1558761 - 1558429 - | hypothetical protein SAV1444 1559990 - 1558845 - | hypothetical protein TERM 1584 1560181 - 1560160 - R 86 -7.3 -5.14563 | CTTTTCATGAAAAAA GCTCTCC ATCATCTA GGAGAGC TAAACTAGTAGTGAT SAV1445 1560540 - 1560424 - | hypothetical protein SAV1446 1560985 - 1560641 - | hypothetical protein SAV1447 1561562 - 1560999 - | hypothetical protein SAV1448 1561905 - 1561555 - | hypothetical protein recU 1562445 - 1563071 + | Holliday junction-specific endonuclease TERM 1585 1564103 - 1564092 - g 71 -3 -5.04987 | opp_overlap 1564092, overlap 1564081 AAGATGTTCAAAAAA CATT ACAA AATG ATGTTGATAATGGTA pbp2 1563068 - 1565251 + | PBP2 TERM 1586 1565308 - 1565263 - T 93 -12.1 -3.1085 | opp_overlap 1565268, overlap 1565268 CTAATCCACTCAACA TAAAATCCTCAGTTATACCAT ATTT ATGGTGTAGCTGAGGATTTTT TTAGGTTCTTCATCT TERM 1587 1565303 - 1565268 - T 100 -12 -4.68724 | opp_overlap 1565268, overlap 1565263 CCACTCAACATAAAA TCCTCAGTTATACCAT ATTT ATGGTGTAGCTGAGGA TTTTTTTAGGTTCTT TERM 1588 1565268 - 1565303 + T 100 -16.4 -5.57054 | opp_overlap 1565263 1565268 CCACTCAACATAAAA TCCTCAGTTATACCAT ATTT ATGGTGTAGCTGAGGA TTTTTTTAGGTTCTT TERM 1589 1565330 - 1565351 + T 82 -4.4 -5.65177 | overlap 1565333 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTATAAGTAT SAV1451 1566158 - 1565817 - | hypothetical protein nth 1566822 - 1566163 - | endonuclease-like protein SAV1453 1567498 - 1566812 - | primosomal protein DnaD TERM 1590 1567748 - 1567782 + r 79 -5.1 -5.22006 | gap 1, opp_overlap 1567751, overlap 1567751 TCATTTTGCAAGCAT AAATCGCCCAG-CTAT TAAT ATAGGCTGGACGATTC TTTTTATTATCATAA TERM 1591 1567779 - 1567751 - R 83 -9 -4.05446 | gap 1, opp_overlap 1567751 1567748 TTTTGCAAGCATAAA TCGCCCAG-CTAT TAAT ATAGGCTGGACGA TTCTTTTTATTATCA TERM 1592 1567751 - 1567779 + r 78 -6.8 -4.68512 | gap 1, opp_overlap 1567751, overlap 1567748 TTTTGCAAGCATAAA TCGCCCAG-CTAT TAAT ATAGGCTGGACGA TTCTTTTTATTATCA asnC 1569118 - 1567826 - | asparaginyl-tRNA synthetase TERM 1593 1569387 - 1569425 + r 71 -4.7 -4.68919 | opp_overlap 1569387, overlap 1569377 ACGACCAAACAAAAA TTCTTGTAACAGAACAT AGCAC ATGTCATGTCACAAGAA TTTTACTTTGTATTT TERM 1594 1569425 - 1569387 - R 100 -9.8 -5.34309 | opp_overlap 1569387 1569377 ACGACCAAACAAAAA TTCTTGTAACAGAACATA GCA CATGTCATGTCACAAGAA TTTTACTTTGTATTT dinG 1572133 - 1569440 - | ATP-dependent DNA helicase TERM 1595 1570732 - 1570714 - G 86 -10.4 -3.62539 | overlap 1570710 TACCAATCAAACCAA GCTGATAT TTA ATATCAGC ATAACTCAACTCATT SAV1456 1573128 - 1572157 - | biotin ligase SAV1457 1574317 - 1573115 - | tRNA CCA-pyrophosphorylase TERM 1596 1574344 - 1574356 + r 71 -3.4 -5.19212 | CCTTTACTTTTGTTA TGCT CATTT AGCA TTTTTTGATAATAAT SAV1458 1575464 - 1574322 - | lipopolysaccharide biosynthesis-related pr-like protein SAV1459 1576025 - 1575708 - | hypothetical protein TERM 1597 1576319 - 1576290 - R 100 -9.5 -5.73339 | gap 1, opp_overlap 1576290 ATAAGCACAAAAAAA CTAGC-AATCACAC AAA ATGTGATTAGCTAG TTAATAAGTGTCTAA TERM 1598 1576290 - 1576319 + r 73 -8.8 -3.21354 | gap 1, opp_overlap 1576290 ATAAGCACAAAAAAA CTAGC-AATCACA CAAAA TGTGATTAGCTAG TTAATAAGTGTCTAA SAV1460 1577059 - 1576361 - | hypothetical protein SAV1461 1577700 - 1577113 - | hypothetical protein SAV1462 1578265 - 1577690 - | hypothetical protein TERM 1599 1578090 - 1578061 - G 77 -9.3 -3.30701 | opp_overlap 1578061, overlap 1578056 GCTTAGTAAATTGAA TTGCAGAAGCGTG ACTT CCCACCTCTGCAA TTTCTAATGTTTCAT SAV1463 1579523 - 1578279 - | hypothetical protein aroA 1580828 - 1579530 - | 3-phosphoshikimate 1-carboxyvinyltransferase aroB 1581902 - 1580838 - | 3-dehydroquinate synthase aroC 1583094 - 1581928 - | chorismate synthase TERM 1600 1582815 - 1582835 + g 88 -6.9 -4.85599 | CACGTTCTTCTTCAC TTATTGGAG CTG CTCCCATAA TTTTTCTCCAATGCG SAV1467 1583680 - 1583480 - | hypothetical protein SAV1468 1583834 - 1583709 - | hypothetical protein TERM 1601 1583845 - 1583797 - G 74 -2 -5.5208 | gap 2, overlap 1583798 CTACAACATAAAAAA CGGGCCTTGTTATGT-A-TAATCA TAA TGACTAACCACATAACAAAACCCT TTCTACCTTTATAAA TERM 1602 1583925 - 1583901 - R 79 -9.3 -3.52102 | ATTTTATTCATATAA CCATGCATCAC GTG GTGAAGCATAG CTAGTAATTTCATTT ndk 1584338 - 1583889 - | nucleoside diphosphate kinase TERM 1603 1584205 - 1584225 + g 75 -9.7 -2.70525 | opp_overlap 1584209, overlap 1584204 1584201 CCATAATGTGTTTCA GCAAGTTCC ATT GGTACTTGC ATTAATTTACCACCG gerCC 1585389 - 1584430 - | heptaprenyl diphosphate syntase component II ubiE 1586116 - 1585391 - | ubiquinone/menaquinone biosynthesis methyltransferase SAV1472 1586691 - 1586119 - | hypothetical protein TERM 1604 1587114 - 1587088 - R 100 -12.5 -4.70319 | opp_overlap 1587094, overlap 1587094 GTATTAAAAGCAAAA TAAAAAGCCCT TATTC AGGGCTTTTTA AGTAAAATTATTTTA TERM 1605 1587094 - 1587108 + r 81 -7.1 -4.67011 | opp_overlap 1587094 1587088 AAAGCAAAATAAAAA GCCCT TATTC AGGGC TTTTTAAGTAAAATT TERM 1606 1587108 - 1587094 - R 90 -7.1 -5.56372 | opp_overlap 1587094, overlap 1587088 AAAGCAAAATAAAAA GCCCT TATTC AGGGC TTTTTAAGTAAAATT hu 1587394 - 1587122 - | DNA-binding protein II TERM 1607 1587324 - 1587334 + g 80 -6.8 -4.72473 | opp_overlap 1587313 AATACAGCATCTACT GCTG AAC CAGC TTCTTTTTTAGTTAA TERM 1608 1587547 - 1587562 + r 78 -6.2 -4.70613 | ATTATTAGCCGTATA TGTGTA ATAA TACACA TTTTATTCAGATTTT gpsA 1588563 - 1587565 - | glycerol-3-phosphate dehydrogenase TERM 1609 1588408 - 1588420 + g 83 -4.9 -5.42975 | AACATCTAATTTCGC GTATT TTA AATAC TTTTTATTTGTATGA engA 1589890 - 1588580 - | GTP-binding protein EngA TERM 1610 1589868 - 1589836 - G 72 -4.9 -4.7373 | opp_overlap 1589866 CTATTCTATTAAAAA TTGTAGATTTACCTA CAT TAGGCCTACCTACAA TAGCTACTATAGGTT TERM 1611 1590094 - 1590063 - R 74 -5.2 -4.96848 | opp_overlap 1590065, overlap 1590065 TTTGTTACATAAAAA TACTCCACATGC AATCATAA ACATGTGGAGTT GACTATTAAATATTA TERM 1612 1590092 - 1590065 - R 77 -7.8 -4.11141 | opp_overlap 1590065, overlap 1590063 TGTTACATAAAAATA CTCCACATGC AATCATAA ACATGTGGAG TTGACTATTAAATAT rpsA 1591287 - 1590112 - | 30S ribosomal protein S1 TERM 1613 1591476 - 1591489 + r 76 -3.9 -5.36441 | AGTAATAAAGTCCGC TATGT TTAT ACATA TTTTTTGTATAAAAA SAV1477 1591893 - 1591816 - | hypothetical protein TERM 1614 1591914 - 1591869 - G 83 -7.9 -4.73388 | overlap 1591875 AACTTTTACCAAAAA TAAAAAGGCAACTTTCATTCA TCAT TGAATAAAAATCACCTTTTAA TTTGAGTAAATCATT TERM 1615 1591908 - 1591875 - G 93 -6.9 -5.65496 | overlap 1591869 TACCAAAAATAAAAA GGCAACTTTCATTCA TCAT TGAATAAAAATCACC TTTTAATTTGAGTAA cmk 1592658 - 1591999 - | cytidylate kinase ansA 1592735 - 1593703 + | L-asparaginase SAV1480 1594804 - 1593818 - | thioredoxin reductase-like protein TERM 1616 1594718 - 1594729 + g 82 -4.4 -5.55001 | opp_overlap 1594718 CTTTTCAATAATTAA GGTA TCAA TACC TTTTCTTTTTTGTTC ebpS 1596666 - 1595206 - | elastin binding protein SAV1482 1598198 - 1596819 - | ATP-dependent DNA helicase RecQ SAV1483 1599141 - 1598188 - | hypothetical protein TERM 1617 1598491 - 1598513 + g 72 -5 -4.7373 | opp_overlap 1598494, overlap 1598509 AATATAAGTTTGATT TAATAATGTA GGT TTCATTATTA TTTTTGATAAAATAG TERM 1618 1598735 - 1598749 + g 70 -3.6 -4.97158 | overlap 1598736 AGTTCATTTTCAAAG TCAATT TGT AATTGG TTTTCTTTAATGTAG fer 1599249 - 1599497 + | ferredoxin TERM 1619 1599563 - 1599530 - T 72 -4.7 -4.96848 | gap 1 TGTTCTATAGAAAAA GCAGGCAAGCTATC GTTTATT GATAG-TCACCTGC TTTTTATTATTATGT SAV1485 1600148 - 1599603 - | hypothetical protein SAV1486 1601506 - 1600550 - | hypothetical protein TERM 1620 1600780 - 1600770 - G 71 -5.4 -4.51743 | TTAGTACTAAATAAA GTTG TAA CAAC ATATGGACGTGATTT SAV1487 1602873 - 1601977 - | hypothetical protein TERM 1621 1602129 - 1602139 + g 73 -4 -5.1356 | CATCTACTGTATTGT CTTT AGT AAAG TTTTTCTTAGTAGAA TERM 1622 1602257 - 1602271 + g 70 -7.2 -3.73132 | overlap 1602242 1602240 1602256 TTATGAATCAATGGT TCGTAA TAT TTACGA TATTCTTTTAAATTT SAV1488 1603836 - 1602931 - | hypothetical protein TERM 1623 1603910 - 1603884 - R 100 -9.6 -5.44119 | TTTATGTTAAAAAAA CTACTTATTCTC AAA GAAAACAAGTAG CATTTAATAAATTAC SAV1489 1606088 - 1603926 - | hypothetical protein SAV1490 1606947 - 1606081 - | hypothetical protein TERM 1624 1606379 - 1606393 + g 70 -7.2 -3.73132 | overlap 1606364 1606362 1606378 TTATGAATCAACGGT TCGTAA TAT TTACGA TATTCTTTTAAGTTT TERM 1625 1607227 - 1607189 - R 100 -13.4 -5.31059 | opp_overlap 1607189 ACATCAATCAAAAAA CGCATGCTATAAATTAGA GTC TCTAATCAATAACATGCG TTCTTAAATAACTAT TERM 1626 1607189 - 1607227 + r 77 -9 -3.68836 | opp_overlap 1607189 ACATCAATCAAAAAA CGCATGCTATAAATTAGA GTC TCTAATCAATAACATGCG TTCTTAAATAACTAT srrB 1609017 - 1607251 - | staphylococcal respiratory response protein TERM 1627 1608969 - 1608936 - GR 75 -5.5 -4.78029 | gap 1, opp_overlap 1608936, overlap 1608931 TTAATAAAATTAAAA CTGTCGTC-ACTATTA AAA TAATAGTTAACCACAG TTTAATTACGACACT srrA 1609708 - 1608983 - | staphylococcal respiratory response protein rluB 1610578 - 1609841 - | ribosomal large subunit pseudouridine synthase B SAV1494 1611113 - 1610571 - | hypothetical protein SAV1495 1611861 - 1611106 - | hypothetical protein SAV1496 1611929 - 1612435 + | hypothetical protein TERM 1628 1612493 - 1612453 - T 79 -5 -5.1848 | opp_overlap 1612453 1612455 AACCAATTTAAAAAA GCCACAATAGCACA-GAC ATTTTTA GTCATGTG-TATTGTGAC TTTTAAGTTATGGTT xerD 1613400 - 1612513 - | site-specific recombinase TERM 1629 1612682 - 1612693 + g 70 -3.6 -4.93696 | TGGCGTAACGTATGT GGCG TTAA CGTC TTTTTAATGTTTGCC TERM 1630 1613442 - 1613420 - R 100 -10.6 -5.42862 | opp_overlap 1613419 1613418 ACACCTCTAAAAAAA GCGAAGGTTA ATT TAACCTACGC AATTTACTATCCTTT SAV1498 1613898 - 1613449 - | ferric uptake regulator-like protein SAV1499 1614545 - 1614003 - | ADP-ribose pyrophosphatase SAV1500 1614627 - 1615535 + | oxidoreductase TERM 1631 1615558 - 1615602 + T 75 -7.4 -4.06491 | gap 1, overlap 1615561 TTTCAGTAATAAAAA CAGCAGCA-TGAGGCGTTT CATTATAA AAATGCCTTACTGCTGTTG TTTATGTACAATTCG SAV1501 1615999 - 1615751 - | hypothetical protein SAV1502 1616770 - 1616015 - | oxidoreductase SAV1503 1616912 - 1617727 + | putative pyrroline-5-carboxylate reductase TERM 1632 1617782 - 1617731 - T 73 -3.9 -5.19251 | opp_overlap 1617732 1617735, overlap 1617735 GAAGACCAATAAAAA CAAACCCG-CCAACACATGTATGCA TCAT CACATACATA-GTTGGACGGGTTAT TTTTATAAATTATTA TERM 1633 1617735 - 1617778 + T 73 -5.5 -4.55383 | opp_overlap 1617735 1617731, overlap 1617732 ACCAATAAAAACAAA CCCG-CCAACACATGTATG CATCATCA CATACATA-GTTGGACGGG TTATTTTTATAAATT TERM 1634 1617778 - 1617735 - T 100 -9.1 -5.06961 | opp_overlap 1617732 1617735, overlap 1617731 ACCAATAAAAACAAA CCCG-CCAACACATGTATGCA TCAT CACATACATA-GTTGGACGGG TTATTTTTATAAATT SAV1504 1618750 - 1617830 - | metallo-beta-lactamase TERM 1635 1619930 - 1619920 - g 74 -5.4 -4.66953 | TGAAGATGTTAAAAA GAAC TTT GTTC GTGGTCAATATGGCG SAV1505 1619063 - 1620547 + | glucose-6-phosphate 1-dehydrogenase SAV1506 1620777 - 1621643 + | AraC family transcriptional regulator TERM 1636 1621713 - 1621661 - T 83 -8 -4.53857 | opp_overlap 1621661 1621660 1621658 ATTAAAAACAAAGAA GCCCCCTAATA-TATCTATAGGTC TACAAAT GGCCT-TAGATTCTATTAGGGGGC ATATTAATATGTTAA TERM 1637 1621661 - 1621713 + T 78 -10.2 -2.54803 | opp_overlap 1621661, overlap 1621660 1621658 ATTAAAAACAAAGAA GCCCCCTAATA-TATCTATAGGTC TACAAAT GGCCT-TAGATTCTATTAGGGGGC ATATTAATATGTTAA malA 1623374 - 1621725 - | alpha-D-1,4-glucosidase TERM 1638 1622373 - 1622393 + g 70 -8.2 -3.27544 | CTTGTCATCGTCACC CCACGTCG ATACA CGTCGTGG TTGGTCGTGATTTTC malR 1624409 - 1623390 - | maltose operon transcriptional repressor TERM 1639 1624576 - 1624538 - R 82 -5.4 -5.3658 | ACGATAAAAATAAAA CCTTCATACTGAAATTCA ATC CGAAAATCAATATAAAGG TTTGTATAAATATTA SAV1509 1624974 - 1624603 - | hypothetical protein SAV1510 1626658 - 1625441 - | hypothetical protein TERM 1640 1626890 - 1626927 + r 93 -11.6 -3.6715 | opp_overlap 1626890 AAATACATAAGGAAA GAGACAATTTCTATCA AATAAA TAATAGAAATTGTCTC TTTAACATTACCTAA TERM 1641 1626927 - 1626890 - R 100 -13.8 -4.08872 | opp_overlap 1626890 AAATACATAAGGAAA GAGACAATTTCTATCA AATAAA TAATAGAAATTGTCTC TTTAACATTACCTAA gnd 1628380 - 1626974 - | 6-phosphogluconate dehydrogenase TERM 1642 1628205 - 1628234 + g 73 -4.3 -4.88222 | opp_overlap 1628196 1628207, overlap 1628207 TCTAAAGAATTAACA AATTCTTCCAATG AATA CGTTGGATGAATA TTTTTCCCTTTTGAT TERM 1643 1628207 - 1628232 + g 73 -6.9 -4.04549 | opp_overlap 1628196 1628207, overlap 1628205 TAAAGAATTAACAAA TTCTTCCAATG AATA CGTTGGATGAA TATTTTTCCCTTTTG SAV1512 1629581 - 1628448 - | tripeptidase SAV1513 1631130 - 1630150 - | hypothetical protein TERM 1644 1630974 - 1630962 - G 76 -7.7 -3.94 | opp_overlap 1630961 1630959 CTAATCTTGAAATAA TCGCT TGT AGCGA ATGTACTTTTGTATG SAV1514 1631581 - 1631144 - | hypothetical protein TERM 1645 1631804 - 1631816 + r 70 -6.3 -4.18443 | opp_overlap 1631803 ACTGCAAAAATGCAT TCAAC CAT GTTGA TTATTGTTCTTTATC bmfBB 1633206 - 1631932 - | branched-chain alpha-keto acid dehydrogenase E2 bfmBAB 1634202 - 1633219 - | branched-chain alpha-keto acid dehydrogenase E1 bfmBAA 1635194 - 1634202 - | branched-chain alpha-keto acid dehydrogenase E1 TERM 1646 1634753 - 1634764 + g 73 -4.4 -4.90079 | overlap 1634746 TACCTTCACCAACAG TTGC TGTT GCAA TTTTCTTCTTACCAT TERM 1647 1634947 - 1634937 - G 77 -5.4 -4.86033 | AAACGCTGATAAAAA CGTA TCA TACG CTGAGATACCCATAT SAV1518 1636631 - 1635210 - | dihydrolipoamide dehydrogenase recN 1638461 - 1636782 - | DNA repair protein TERM 1648 1637770 - 1637786 + g 74 -5.2 -4.66264 | GTCATATGTGCGTTA TTAAGC GCTAA GCTTAA TTTTTCAGAGTTTTG ahrC 1638929 - 1638477 - | arginine repressor TERM 1649 1638620 - 1638634 + g 80 -7.2 -4.57073 | CTCCAATAGATTGTG CATTAC CAG GTAATG TTTTTAGAACAAGTA ispA 1640242 - 1639361 - | geranyltranstransferase-like protein SAV1522 1640450 - 1640220 - | exodeoxyribonuclease VII small subunit xseA 1641780 - 1640443 - | exodeoxyribonuclease VII large subunit TERM 1650 1640603 - 1640617 + g 77 -5.8 -4.68612 | ATTGTATTAGTTGGA CTTAAA TTG TTTAAG TTTTCTACTTTATTT nusB 1642186 - 1641797 - | transcription antitermination protein NusB SAV1525 1642608 - 1642246 - | hypothetical protein accC 1643978 - 1642623 - | acetyl-CoA carboxylase biotin carboxylase subunit accB 1644442 - 1643978 - | acetyl-CoA carboxylase biotin carboxyl carrier subunit TERM 1651 1644179 - 1644197 + g 75 -8.2 -3.72078 | opp_overlap 1644179, overlap 1644175 TGGCGATTTGTAAAA TGTACCTA CCA TAGGTGCA TTAATTGTTTTGTGA SAV1528 1645473 - 1644916 - | elongation factor P SAV1529 1646560 - 1645499 - | Xaa-Pro dipeptidase SAV1531 1646665 - 1647246 + | hypothetical protein SAV1532 1647260 - 1647478 + | hypothetical protein SAV1533 1648372 - 1647542 - | lipoate protein ligase SAV1534 1648530 - 1648916 + | hypothetical protein SAV1535 1650753 - 1649281 - | glycine dehydrogenase subunit 2 TERM 1652 1649370 - 1649382 + g 73 -7.7 -3.88559 | TCACAGTTGTATGTG GTGCT TCT AGCAC TTTATCAGGATCATT TERM 1653 1650039 - 1650070 + g 77 -3.2 -5.41143 | gap 1 ATAATAGACCACCAG CATTATGGACGATTT CAC GGATT-TCCATAATG TTTTTTTCGAAAATA SAV1536 1652092 - 1650746 - | glycine dehydrogenase subunit 1 SAV1537 1653203 - 1652112 - | glycine cleavage system aminomethyltransferase T TERM 1654 1653258 - 1653225 - R 93 -11.9 -3.08211 | opp_overlap 1653231, overlap 1653231 ACCCCCTTAAAATTA TAAAAACAGGATAGC AATC GCTACCCTGTTTATA AATCACCAATTCAGG TERM 1655 1653231 - 1653252 + r 82 -8.7 -3.91897 | opp_overlap 1653231 1653225 TTAAAATTATAAAAA CAGGATAGC AATC GCTACCCTG TTTATAAATCACCAA TERM 1656 1653252 - 1653231 - R 100 -10.9 -5.09245 | opp_overlap 1653231, overlap 1653225 TTAAAATTATAAAAA CAGGATAGC AATC GCTACCCTG TTTATAAATCACCAA SAV1538 1653886 - 1653362 - | shikimate kinase SAV1539 1654616 - 1654119 - | hypothetical protein SAV1540 1654833 - 1654534 - | hypothetical protein SAV1541 1655254 - 1654820 - | hypothetical protein SAV1542 1655555 - 1655244 - | exogenous DNA-binding protein comGC SAV1543 1656639 - 1655569 - | DNA transport mechinery protein comGB SAV1544 1657585 - 1656611 - | late competence protein comGA TERM 1657 1657409 - 1657395 - GR 76 -8.6 -3.51934 | overlap 1657393 TGCTGTGTAGAAACA TCAAGC CCA GCTTGA AACTTCATATAAACT TERM 1658 1657591 - 1657620 + r 100 -10.8 -5.1963 | opp_overlap 1657591 GAATCTTCAAAAAAA CACCTCCTACAT ATAATC ACGTAGGAGGTG TTTTTATTACTTCAA TERM 1659 1657620 - 1657591 - R 100 -13.7 -5.43866 | opp_overlap 1657591 GAATCTTCAAAAAAA CACCTCCTACATA TAAT CACGTAGGAGGTG TTTTTATTACTTCAA SAV1545 1658260 - 1657637 - | metallo-beta-lactamase superfamily protein SAV1546 1658586 - 1658257 - | hypothetical protein glcK 1659572 - 1658586 - | glucokinase TERM 1660 1658908 - 1658897 - G 77 -5.8 -4.72272 | TTGCCGCATCAAAAA CAGC TTTT GCTG TAACCTTATTTTCTT SAV1548 1659772 - 1659569 - | hypothetical protein SAV1549 1661216 - 1659753 - | hypothetical protein SAV1550 1661767 - 1661228 - | hypothetical protein TERM 1661 1661941 - 1661913 - R 100 -9.7 -4.93365 | opp_overlap 1661913 GTGCATAATTAAAAA GGTGAAACCTC TTATTTT GAGATTTCACC TTTTTTATTGTTAAT TERM 1662 1661913 - 1661941 + r 90 -7.5 -5.66229 | opp_overlap 1661913 GTGCATAATTAAAAA GGTGAAACCTC TTATTTT GAGATTTCACC TTTTTTATTGTTAAT rpmG 1662125 - 1661976 - | 50S ribosomal protein L33 pbp3 1664313 - 1662238 - | penicillin-binding protein 3 TERM 1663 1662468 - 1662482 + g 73 -8.6 -3.25204 | overlap 1662466 1662473 TACCCGTTTTACCAG CAGTAG GTA CTACTG TATCTTTAAAACTAA TERM 1664 1664417 - 1664398 - R 100 -9.3 -4.89054 | TTGACAAAAAAATAA CGGTCTC ATTTAA GAGACCG AACAAGTAATCATAC sodA 1665033 - 1664434 - | superoxide dismutase TERM 1665 1664706 - 1664729 + g 72 -2.5 -5.31275 | opp_overlap 1664701 1664711, overlap 1664707 CTTTTTTAAATTCTT CTAAAGAAC CCCATT GTTCTTTAA TTTTTTCTACTACAG TERM 1666 1665257 - 1665298 + r 80 -6.9 -4.69415 | opp_overlap 1665249 1665257, overlap 1665250 CTATAATTTAAAAAA TGAGATTTATGCATA CATCTGACCAAA TGTGCATAAATCTCA TTTCTTTATATTAAT TERM 1667 1665298 - 1665257 - R 84 -7 -5.1925 | gap 2, opp_overlap 1665257 1665250, overlap 1665249 CTATAATTTAAAAAA TGAGATTTATGCATACATCT GACC AAATGT--GCATAAATCTCA TTTCTTTATATTAAT SAV1554 1665719 - 1665309 - | ferric uptake regulator-like protein SAV1555 1666569 - 1665706 - | ABC transporter MreB SAV1556 1667378 - 1666611 - | ABC transporter MreA SAV1557 1668412 - 1667522 - | endonuclease IV SAV1558 1669768 - 1668422 - | ATP-dependent RNA helicase TERM 1668 1669103 - 1669127 + g 84 -5.2 -5.45813 | ACCTTTAGTAGGTAT TAAAAAGAAT TCGAT GTTCTTTTTA TTTTGTTTTTTACTG TERM 1669 1669882 - 1669835 - R 73 -3.6 -5.28942 | opp_overlap 1669838 1669844 1669876, overlap 1669837 1669838 1669843 1669844 TATTTTAAATAAAAA TATTAAAACCTCGAAATTTCAA AATT TAGAAATCCCGAGATTTTAGTT TAAATATATTGAAAT TERM 1670 1669880 - 1669837 - R 72 -6.2 -4.27026 | opp_overlap 1669838 1669844 1669876, overlap 1669835 1669838 1669843 1669844 TTTTAAATAAAAATA TTAAAACCTCGAAATTTCAA AATT TAGAAATCCCGAGATTTTAG TTTAAATATATTGAA TERM 1671 1669879 - 1669838 - R 78 -9.7 -3.15131 | opp_overlap 1669838 1669844 1669876, overlap 1669837 1669835 1669843 1669844 TTTAAATAAAAATAT TAAAACCTCGAAATTTCAA AATT TAGAAATCCCGAGATTTTA GTTTAAATATATTGA TERM 1672 1669874 - 1669843 - R 70 -5.2 -4.62102 | opp_overlap 1669838 1669844, overlap 1669838 1669837 1669835 1669844 ATAAAAATATTAAAA CCTCGAAATTTCAA AATT TAGAAATCCCGAGA TTTTAGTTTAAATAT SAV1559 1670982 - 1669882 - | hypothetical protein TERM 1673 1669908 - 1669937 + g 77 -3 -5.47431 | opp_overlap 1669911, overlap 1669912 1669914 GAAATGGATCTGTAT TAATTGTAGATG CTTCAA CATCTATATTTA TTTTTTCTATATTGA TERM 1674 1669912 - 1669933 + g 73 -3.8 -5.16969 | opp_overlap 1669911, overlap 1669908 1669914 TGGATCTGTATTAAT TGTAGATG CTTCAA CATCTATA TTTATTTTTTCTATA SAV1560 1671662 - 1670985 - | hypothetical protein TERM 1675 1671715 - 1671685 - R 93 -8.5 -5.14563 | gap 1 TCCTTTATGAAAAAA GAGGTTGA-ACATT ATTC AATGTACCAACCTC ACTCAAGTTAAATCT sigA 1672899 - 1671793 - | RNA polymerase sigma factor RpoD dnaG 1674940 - 1673123 - | DNA primase SAV1563 1675819 - 1675001 - | hypothetical protein SAV1564 1676453 - 1675830 - | hypothetical protein TERM 1676 1676712 - 1676762 + H 100 -13 -4.39166 | gap 2, opp_overlap 1676711 1676724 1676729 TTTAAAATATTAACT CGTCCCATGGAA-GTAA-AGCATA TTTAC TATGCTGTTATTTTCCATGGGGCG TTTTCATGTATGAGG glyS 1676788 - 1678179 + | glycyl-tRNA synthetase TERM 1677 1678258 - 1678227 - T 77 -6 -4.93318 | opp_overlap 1678222 1678227 TATAATTTATAAAAA GAGATACTGG TTAGTAAAATTG CCAGTATCTC TTTTCTATTCAAAAA TERM 1678 1678227 - 1678258 + T 85 -8.2 -4.66537 | gap 1, opp_overlap 1678227, overlap 1678222 TATAATTTATAAAAA GAGATACTGGTTAGT AAA ATTG-CCAGTATCTC TTTTCTATTCAAAAA TERM 1679 1678269 - 1678318 + T 85 -8.1 -4.47977 | opp_overlap 1678274, overlap 1678274 ATCTCTTTTCTATTC AAAAAGGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACCTTTTA TTATTTTATGTTATT TERM 1680 1678274 - 1678313 + T 90 -8 -5.12916 | opp_overlap 1678274, overlap 1678269 TTTTCTATTCAAAAA GGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACC TTTTATTATTTTATG TERM 1681 1678313 - 1678274 - T 100 -12.4 -4.65895 | opp_overlap 1678269 1678274 TTTTCTATTCAAAAA GGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACC TTTTATTATTTTATG SAV1566 1679081 - 1678329 - | DNA repair protein RecO era 1680002 - 1679103 - | GTP-binding protein Era cdd 1680407 - 1680003 - | cytidine deaminase SAV1569 1680762 - 1680418 - | diacylglycerol kinase SAV1570 1681232 - 1680765 - | hypothetical protein phoH 1682180 - 1681233 - | phosphate starvation-induced protein phoH-like protein TERM 1682 1681675 - 1681691 + g 72 -8 -3.44552 | AATCCAAGTGACTCT CCTGCT TCAAC AGCAGG TCTTGTTAATACAAT TERM 1683 1682470 - 1682443 - R 90 -6.4 -5.53288 | gap 1, opp_overlap 1682443 CTTAACGTAAAAAAA CAAGCAACTACCA TTA CGATAGT-GCTTG TTTTCAAAAAATTTT SAV1572 1683182 - 1682484 - | hypothetical protein SAV1573 1684188 - 1683199 - | hypothetical protein SAV1574 1684913 - 1684206 - | hypothetical protein TERM 1684 1684853 - 1684817 - G 83 -6.9 -4.76892 | gap 1, overlap 1684819 ATATTAACGTAAAAA TAGGTTGAACAA-TTA TATTAC TAACTTGTTCAACCCA AGTATCTCCAGCCGT TERM 1685 1684851 - 1684819 - G 73 -7.3 -3.99461 | gap 1, overlap 1684817 ATTAACGTAAAAATA GGTTGAACAA-TTA TATTAC TAACTTGTTCAACC CAAGTATCTCCAGCC TERM 1686 1685081 - 1685047 - R 100 -13.8 -5.88565 | opp_overlap 1685047 TTGACAACAAAAAAA CATCACATATTAGTGT CAG ACACTAACTTGTGATG TTTATTTTATATAAT TERM 1687 1685047 - 1685081 + r 100 -11.6 -4.84146 | opp_overlap 1685047 TTGACAACAAAAAAA CATCACATATTAGTGT CAG ACACTAACTTGTGATG TTTATTTTATATAAT rpsU 1685309 - 1685133 - | 30S ribosomal protein S21 TERM 1688 1685406 - 1685419 + r 81 -3.9 -5.63517 | opp_overlap 1685418 TCTGTAATTTATGGT CAATT AGTA AATTG TTTTTTATTTGAAAC TERM 1689 1685483 - 1685458 - R 70 -5.6 -4.22407 | opp_overlap 1685446 1685458 CATCAAAATCACAAA GACTTTTAGA TTTTGT TCTAAAAATC TCTTAATAATTTATT SAV1576 1686948 - 1685602 - | hypothetical protein SAV1577 1687707 - 1686955 - | hypothetical protein TERM 1690 1687664 - 1687681 + g 78 -7 -4.39166 | opp_overlap 1687664 TTTGTAATAAAAAAA CGCTGA CTTACA TCAGCG TTTTGGTCTATGAAA TERM 1691 1687681 - 1687664 - G 100 -7.7 -5.7946 | opp_overlap 1687664 TTTGTAATAAAAAAA CGCTGAC TTAC ATCAGCG TTTTGGTCTATGAAA SAV1578 1688647 - 1687709 - | methyltransferase TERM 1692 1687911 - 1687930 + g 70 -2.2 -5.22289 | opp_overlap 1687911 ATATGCGCTAAAATA TTTGCTAT TACA ATATCAAA TTTTTCTGTTTCGTC TERM 1693 1688294 - 1688318 + g 81 -8 -4.11692 | opp_overlap 1688298 CTTCGACGCTCGGAA TGGATGGAAA TAGTT TTTCCATTCA TTTTCCCAATCCGTC dnaJ 1689790 - 1688651 - | DnaJ protein TERM 1694 1689893 - 1689853 - R 100 -12.2 -3.70149 | opp_overlap 1689859, overlap 1689859 GTCATACTATCCAAA TAAAAAGCCAAAGCCAAT GTTCT ATTGACTTTGACTTTTCA GATCATGACAACATT TERM 1695 1689887 - 1689859 - R 100 -9 -5.30616 | opp_overlap 1689859, overlap 1689853 CTATCCAAATAAAAA GCCAAAGCCAAT GTTCT ATTGACTTTGAC TTTTCAGATCATGAC dnaK 1691758 - 1689926 - | DnaK protein grpE 1692453 - 1691827 - | GrpE protein hrcA 1693462 - 1692485 - | heat-inducible transcriptional repressor TERM 1696 1692537 - 1692559 + g 71 -6.3 -4.25074 | TAATGCATAGCTGTA GGTCCAATC ACAGC GATTTGACC TTTTAACGTTTCATC TERM 1697 1692817 - 1692840 + g 83 -8.4 -4.28111 | TATGATTATTCATCG TATTTATCAA TTTA TTGATAAATA TTTCTTCCTGCTCTG hemN 1694686 - 1693562 - | coproporphyrinogen III oxidase TERM 1698 1694945 - 1694923 - H 81 -5.6 -5.26119 | overlap 1694924 1694926 TCCTTAAAAATAAAA TTACATGAGT AAA ACTCATGCAT AAGGGAGTGGGACAG TERM 1699 1694944 - 1694924 - H 84 -9.1 -3.74587 | overlap 1694923 1694926 CCTTAAAAATAAAAT TACATGAGT AAA ACTCATGCA TAAGGGAGTGGGACA TERM 1700 1694942 - 1694926 - H 79 -9.5 -3.43674 | overlap 1694924 1694923 TTAAAAATAAAATTA CATGAGT AAA ACTCATG CATAAGGGAGTGGGA TERM 1701 1695018 - 1695037 + G 74 -9.4 -3.09273 | opp_overlap 1695022, overlap 1695022 CTTGCATTGTCTGTA GAAATTGG GAAT CCAATTTC TCTGTGTTGGGGCCC TERM 1702 1695043 - 1695062 + G 77 -9.3 -3.20164 | ATCCAATTTCTCTGT GTTGGGG CCCACA CCCCAAC TTGCATTGCCTGTAG SAV1584 1694963 - 1695121 + | hypothetical protein lepA 1697075 - 1695252 - | GTP-binding protein LepA TERM 1703 1695425 - 1695439 + g 72 -2.9 -5.36965 | CCATTGATTTAATAT TTGTA CGCGC TACAA TTTTTTGTCCTATTG TERM 1704 1697267 - 1697283 + H 81 -8.1 -4.23213 | opp_overlap 1697263 TATAAAACGTATTGA TTGTGTT TCC AACACAA TTTATTAAATCTGCA rpsT 1697421 - 1697672 + | 30S ribosomal protein S20 TERM 1705 1697712 - 1697683 - T 100 -15.3 -3.56366 | opp_overlap 1697683 1697688, overlap 1697688 AATAATCTTTTTAAA TAAAAGTTCAAGC GCAT GCTTGAACTTTTA TTTTTTATAAAGATA TERM 1706 1697683 - 1697712 + T 100 -15.3 -5.252 | opp_overlap 1697683 1697688, overlap 1697688 AATAATCTTTTTAAA TAAAAGTTCAAGC GCAT GCTTGAACTTTTA TTTTTTATAAAGATA TERM 1707 1697707 - 1697688 - T 100 -10.8 -4.86731 | opp_overlap 1697688 1697683, overlap 1697683 TCTTTTTAAATAAAA GTTCAAGC GCAT GCTTGAAC TTTTATTTTTTATAA TERM 1708 1697688 - 1697707 + T 100 -10.8 -5.49579 | opp_overlap 1697683 1697688, overlap 1697683 TCTTTTTAAATAAAA GTTCAAGC GCAT GCTTGAAC TTTTATTTTTTATAA holA 1698691 - 1697717 - | DNA polymerase III subunit delta TERM 1709 1698480 - 1698499 + g 76 -3.6 -5.36441 | opp_overlap 1698480, overlap 1698496 CCTGTAAATATATAT GCATTTTT AACC AAAATTGC TTTTTTATCTGAAAA SAV1588 1700949 - 1698748 - | late competence protein ComEC TERM 1710 1700637 - 1700615 - G 76 -6.5 -4.54727 | TTCTTTAAATCAAAA TTCTTTTTA TCTGT TAAAAAGAA AGGATATATTTCATT TERM 1711 1700923 - 1700884 - G 73 -4.5 -4.86613 | gap 1 TAAAATGAAAAGAAA TGTAGAGAGCACTTTG CTAGAATTC CAAAGCACTC-CTACA ATCATTGATAACGCG comEB 1701415 - 1700954 - | late competence operon required for DNA binding and uptake SAV1590 1702184 - 1701507 - | competence protein ComEA TERM 1712 1702184 - 1702230 + r 78 -4 -5.42198 | gap 2, opp_overlap 1702185 1702190, overlap 1702185 ATAAAAATTGATACA ATAAAACCACTC-CTCA-ACTT TATAC ACGTCTGAGCGAGTGGTTTTAC TTTTATTTTTTCGCA TERM 1713 1702185 - 1702229 + r 71 -7.5 -3.83692 | gap 2, opp_overlap 1702185 1702190, overlap 1702184 TAAAAATTGATACAA TAAAACCACTC-CTCA-ACTT TATAC ACGTCTGAGCGAGTGGTTTTA CTTTTATTTTTTCGC SAV1591 1702949 - 1702233 - | hypothetical protein SAV1592 1703305 - 1702952 - | iojap family protein SAV1593 1703890 - 1703306 - | hydrolase SAV1594 1704449 - 1703880 - | nicotinate-nucleotide adenylyltransferase SAV1595 1704742 - 1704452 - | hypothetical protein aroE 1705552 - 1704746 - | shikimate 5-dehydrogenase SAV1597 1706666 - 1705566 - | GTP-binding protein YqeH TERM 1714 1706587 - 1706603 + g 76 -4.4 -5.05037 | overlap 1706588 CGAAACATATTATGC TCTGGT ACAAA ACCAGG TTTATTTTTATCTTC SAV1598 1707194 - 1706667 - | putative lipase pfs 1707900 - 1707214 - | 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase TERM 1715 1707401 - 1707414 + g 86 -5.3 -5.59502 | ATTTCAACCGCCATC GCATT TGGA AATGC TTTTTTAATTTTTTG SAV1600 1708214 - 1708483 + | hypothetical protein SAV1601 1708873 - 1708685 - | enterotoxin-like protein SAV1602 1709495 - 1709022 - | hypothetical protein TERM 1716 1709653 - 1709635 - R 100 -14.6 -3.20164 | CTACAGGCAATGCAA GTTGGGGC GGG GCCCCAAC ATAGAAGCTGGCGGA TERM 1717 1709748 - 1709768 + r 93 -11.3 -3.61527 | opp_overlap 1709752 AATTAGTATTTCTTA TACATGAGT TTT ACTCATGTA TTCCTATTTTTAAGT TERM 1718 1709806 - 1709785 - R 89 -11.7 -2.72344 | opp_overlap 1709789, overlap 1709787 1709789 TCCTATTTTTAAGTA CACATTAGC TGTG GCTAATGTG TAAGAACCACTACAT TERM 1719 1710004 - 1710020 + r 71 -2.3 -5.42605 | opp_overlap 1710001 AACAGTATATCAGAA AAAATGA TAA TCATTTC TTTTATTTTTATTAA TERM 1720 1710124 - 1710098 - R 81 -5.9 -5.27206 | GATACACAACAAAAA GAGCAGTACAT TTGTC ATGCACCACTC TCAACAAATATATTT SAV1603 1711422 - 1710202 - | hypothetical protein TERM 1721 1711601 - 1711575 - R 81 -5.9 -5.22006 | TCATCACAACAAAAA GAGCAGTACAT TTGTC ATGCACCACTC TCCCTTAAAATATAT SAV1604 1712940 - 1711711 - | transmembrane transport protein SAV1605 1713705 - 1712953 - | hypothetical protein SAV1606 1715066 - 1713705 - | acetyl-CoA carboxylase SAV1607 1715529 - 1715080 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit SAV1608 1716541 - 1715531 - | hypothetical protein TERM 1722 1716376 - 1716356 - G 70 -6.9 -3.72695 | ATTTTGCGTATTAAA TTGAATGGT AGG ACCAATCAA AGTATATTCAATCGC SAV1609 1717265 - 1716531 - | hypothetical protein TERM 1723 1717469 - 1717506 + r 86 -6.3 -5.46698 | AGGTTCTGCTATCAT TCGGTCTGATGGAAAAT TTTT ACTTTTCATCTGTCCGA TTTTTTGATTTTGAA TERM 1724 1717567 - 1717531 - R 95 -8.1 -5.47159 | TTTGAATATAAAAAA GCACGACCGAAGTAT CATTAAC ACACTTCAATCGCGC AATTAAACAATCTAT greA 1718067 - 1717591 - | transcription elongation factor udk 1718718 - 1718095 - | uridine kinase SAV1612 1719986 - 1718718 - | protease TERM 1725 1719881 - 1719864 - G 70 -4.1 -4.68593 | TTGACCACCTAAAAA TACGGCA TCAG CGCCATA ATGTACTGCTATTTT SAV1613 1720921 - 1719998 - | protease SAV1614 1721562 - 1720924 - | caffeoyl-CoA O-methyltransferase TERM 1726 1721834 - 1721799 - R 100 -9.1 -5.47218 | opp_overlap 1721833 CTTGACTTAAAAAAA TACTCTTGCCTACCC ATCTTA AGGTTAGCAAGAGTA AAATCTTTTTAATTA SAV1615 1722155 - 1721847 - | hypothetical protein SAV1616 1722541 - 1722170 - | hypothetical protein TERM 1727 1722584 - 1722601 + r 71 -5.7 -4.45807 | opp_overlap 1722584 1722583 1722598, overlap 1722592 1722598 ATCGAGTCCTAAAAT TTTATGT TGTA ACATAAA TTATTTATTTTGCTC SAV1617 1722862 - 1722602 - | hypothetical protein alaS 1725555 - 1722925 - | alanyl-tRNA synthetase TERM 1728 1725700 - 1725676 - R 89 -3.5 -6.04324 | overlap 1725649 TTAAAAAATAAAAAA CGCCCATCC TCAAAAG GGACGAACG TTATCGCGGTACCAC SAV1619 1728375 - 1725898 - | deoxyribonuclease SAV1620 1729045 - 1728377 - | hypothetical protein TERM 1729 1729414 - 1729398 - R 72 -8 -3.70149 | opp_overlap 1729398 TGCACATTATTGAAA GCTGAC TTTTG GTCAGC TTCTATGTTGGGGGC TERM 1730 1729398 - 1729414 + r 77 -8.7 -3.68024 | opp_overlap 1729398 TGCACATTATTGAAA GCTGACT TTT GGTCAGC TTCTATGTTGGGGGC TERM 1731 1729421 - 1729441 + r 100 -13.3 -3.20878 | TTGGTCAGCTTCTAT GTTGGGGGC CCC GTCCCCAAC TTCCATTGCCTGTTG TERM 1732 1729512 - 1729531 + r 76 -9.4 -3.09273 | opp_overlap 1729516, overlap 1729516 CTTCCATTGCCTGTT GAAATTGG GGTT CCAATTTC TCTATGTTGGGGCCC TERM 1733 1729537 - 1729556 + r 76 -9.3 -3.20164 | TTCCAATTTCTCTAT GTTGGGG CCCCGT CCCCAAC TTCCATTGCCTGTAG TERM 1734 1729657 - 1729618 - R 79 -9.4 -3.41024 | opp_overlap 1729623 1729625, overlap 1729616 1729619 CCCGCCAATATAACA TTGTAGAGCCTAGGACAT TGTG ATGTCCCAGACTCTATCA TCATGAATTATTCTC TERM 1735 1729657 - 1729619 - R 100 -12.7 -2.64293 | gap 1, opp_overlap 1729623 1729625, overlap 1729618 1729616 CCGCCAATATAACAT TG-TAGAGCCTAGGACAT TGTG ATGTCCCAGACTCTATCA TCATGAATTATTCTC TERM 1736 1729623 - 1729652 + r 74 -9.3 -2.83641 | opp_overlap 1729618 1729619 1729616, overlap 1729625 CAATATAACATTGTA GAGCCTAGGACAT TGTG ATGTCCCAGACTC TATCATCATGAATTA SAV1621 1730858 - 1729740 - | 5-methylaminomethyl-2-thiouridylate-methyltransf erase SAV1622 1732001 - 1730859 - | iron-sulfur cofactor synthesis protein SAV1623 1732313 - 1733332 + | flavin dependant oxidoreductase TERM 1737 1733528 - 1733470 - T 70 -6.2 -4.08919 | gap 2, opp_overlap 1733477 1733494, overlap 1733472 1733477 AAATTCTAAAGCAAA TATGAAAGCGCCCCTTCAACTTTACACT GTGTT AGTGTTTATTTGATGGGGCGCTTTC--A AAATATTGAAAAGCA TERM 1738 1733528 - 1733472 - T 100 -18.2 -3.62756 | opp_overlap 1733477 1733494, overlap 1733470 1733477 ATTCTAAAGCAAATA TGAAAGCGCCCCTTCAACTTTACACT GTGTT AGTGTTTATTTGATGGGGCGCTTTCA AAATATTGAAAAGCA TERM 1739 1733477 - 1733523 + T 100 -13 -3.6106 | opp_overlap 1733477 1733470 1733472, overlap 1733494 AAAGCAAATATGAAA GCGCCCCTTCAACTTTACACTG TGT TAGTGTTTATTTGATGGGGCGC TTTCAAAATATTGAA TERM 1740 1733523 - 1733477 - T 100 -12.3 -4.05229 | opp_overlap 1733477 1733494, overlap 1733470 1733472 AAAGCAAATATGAAA GCGCCCCTTCAACTTTACACT GTGTT AGTGTTTATTTGATGGGGCGC TTTCAAAATATTGAA SAV1624 1733710 - 1733564 - | hypothetical protein csbD 1733932 - 1733750 - | sigmaB-controlled gene product TERM 1741 1733977 - 1733940 - R 77 -8.5 -3.70902 | opp_overlap 1733940 TCTGCCATAGTGAAA CCTCCTTGGATGTATAT ATTT ATATACCACTAAGGAGG TTCGCTAAACATTAT TERM 1742 1733940 - 1733977 + r 85 -10.7 -3.0701 | opp_overlap 1733940 TCTGCCATAGTGAAA CCTCCTTGGATGTATAT ATTT ATATACCACTAAGGAGG TTCGCTAAACATTAT SAV1626 1734454 - 1734032 - | hypothetical protein SAV1627 1734539 - 1735813 + | recombination factor protein RarA TERM 1743 1735917 - 1735861 - T 79 -10.5 -3.00039 | gap 1, opp_overlap 1735861 1735866, overlap 1735866 TAGCTATAATCAAAT CAAAACTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAGTTTTA GTTTTATGGTGTGGT TERM 1744 1735861 - 1735917 + T 72 -8.3 -3.30505 | gap 1, opp_overlap 1735861 1735866, overlap 1735866 TAGCTATAATCAAAT CAAAACTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAGTTTTA GTTTTATGGTGTGGT TERM 1745 1735866 - 1735912 + T 87 -8.2 -4.74012 | gap 1, opp_overlap 1735861 1735866, overlap 1735861 ATAATCAAATCAAAA CTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAG TTTTAGTTTTATGGT TERM 1746 1735912 - 1735866 - T 85 -8.2 -4.62957 | gap 1, opp_overlap 1735866 1735861, overlap 1735861 ATAATCAAATCAAAA CTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAG TTTTAGTTTTATGGT SAV1628 1736747 - 1735974 - | hypothetical protein TERM 1747 1736936 - 1736914 - R 100 -15 -4.95896 | overlap 1736904 AGAAACGCATAAAAA TACGCAAGAC AAA GTCTTGCGTA TCGATAGAGTCCGTA SAV1629 1737062 - 1736961 - | hypothetical protein aspS 1738974 - 1737208 - | aspartyl-tRNA synthetase hisS 1740252 - 1738990 - | histidyl-tRNA synthetase TERM 1748 1740395 - 1740365 - R 90 -6.8 -5.56372 | overlap 1740353 1740366 1740393 AAAGCAAAAGAAAAA GCCCTTGCACAGCC TGA AACTGCACAAGGGA CGAATATCCGTGTTG TERM 1749 1740394 - 1740366 - R 93 -10.3 -3.90163 | overlap 1740353 1740365 1740393 AAGCAAAAGAAAAAG CCCTTGCACAGCC TGA AACTGCACAAGGG ACGAATATCCGTGTT lytH 1741589 - 1740714 - | N-acetylmuramoyl-L-alanine amidase TERM 1750 1740984 - 1741005 + g 79 -10.3 -2.92712 | overlap 1740999 AACTGTCATTCCATT TGCATTAGA TGAT TCTAATGCA TCATTATGTATACTC SAV1633 1742038 - 1741586 - | D-tyrosyl-tRNA deacylase TERM 1751 1741885 - 1741896 + g 73 -4.4 -4.90525 | CATCTTCAAATAATC TTGC ATTA GCAA TTTTCTTTGCAATTA relA 1744239 - 1742050 - | GTP pyrophosphokinase TERM 1752 1744584 - 1744564 - R 100 -7.7 -5.68438 | TCAGTAAATAAAAAA TCCTAACAT CTC ATGTTAAGA AAACTTAAACAACTT apt 1745185 - 1744667 - | adenine phosphoribosyltransferase SAV1636 1747480 - 1745207 - | single-strand DNA-specific exonuclease TERM 1753 1747672 - 1747638 - R 100 -10.2 -5.13137 | opp_overlap 1747638 1747634 TAAATAAAGTAAAAA GCGGTATGTGAA CTCTTTATTGT TTCACATACCGC TTAATTCATTTTAAA TERM 1754 1747638 - 1747672 + r 83 -10.2 -3.54177 | opp_overlap 1747638, overlap 1747634 TAAATAAAGTAAAAA GCGGTATGTGAA CTCTTTATTGT TTCACATACCGC TTAATTCATTTTAAA secF 1749962 - 1747683 - | bifunctional preprotein translocase subunit SecD/SecF TERM 1755 1748232 - 1748244 + g 85 -6.3 -5.2189 | opp_overlap 1748232 CGATGCATAGATTAA TGCAA GCA TTGCA TTTTTTGCTAATTCC TERM 1756 1750217 - 1750193 - R 100 -13 -4.78149 | opp_overlap 1750193 CTTATAACTTAAAAA GGATGAAACG CTATT CGTTTCATCC TTTTTAATACCACTT TERM 1757 1750193 - 1750217 + r 100 -13 -4.73388 | opp_overlap 1750193 CTTATAACTTAAAAA GGATGAAACG CTATT CGTTTCATCC TTTTTAATACCACTT SAV1638 1750497 - 1750237 - | hypothetical protein tgt 1751655 - 1750516 - | queuine tRNA-ribosyltransferase TERM 1758 1750768 - 1750780 + g 80 -6.3 -4.7497 | CGGTCTTAAATCATC TGCAA ATT TTGCA TTTTTAATAACTAAA queA 1752703 - 1751678 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase ruvB 1753709 - 1752705 - | Holliday junction DNA helicase B ruvA 1754343 - 1753741 - | holliday junction DNA helicase SAV1643 1754815 - 1754357 - | hypothetical protein obgE 1756117 - 1754825 - | GTPase ObgE TERM 1759 1756209 - 1756170 - R 72 -8.8 -2.90382 | gap 1, opp_overlap 1756173, overlap 1756165 1756173 AATAATTATAGCATA TTAGAGCCCCTTATATATT GTA AATA-ATTAGGGGCTCTTA TGCAGTTGCTTTTAA TERM 1760 1756173 - 1756206 + r 83 -10.5 -3.3858 | gap 1, opp_overlap 1756170 1756165 1756173 AATTATAGCATATTA GAGCCCCTTATATATT GTA AATA-ATTAGGGGCTC TTATGCAGTTGCTTT TERM 1761 1756206 - 1756173 - R 78 -10.5 -2.69178 | gap 1, opp_overlap 1756173, overlap 1756170 1756165 AATTATAGCATATTA GAGCCCCTTATATATT GTA AATA-ATTAGGGGCTC TTATGCAGTTGCTTT TERM 1762 1756456 - 1756434 - R 100 -12.1 -5.56112 | opp_overlap 1756434 1756436 ATAAAAAGTAAAAAA CACCAGAAG ATTCA CTTCTGGTG TTAACTAGACAAAAT TERM 1763 1756434 - 1756456 + r 93 -12.1 -3.05463 | opp_overlap 1756434, overlap 1756436 ATAAAAAGTAAAAAA CACCAGAAG ATTCA CTTCTGGTG TTAACTAGACAAAAT TERM 1764 1756436 - 1756454 + r 73 -8.9 -3.08679 | opp_overlap 1756434, overlap 1756434 AAAAAGTAAAAAACA CCAGAAG ATTCA CTTCTGG TGTTAACTAGACAAA rpmA 1756755 - 1756471 - | 50S ribosomal protein L27 TERM 1765 1756658 - 1756674 + g 78 -7.3 -4.41494 | AATTGACCGTCAGCA CGTTTAG CAC CTAAGCG TTTTGATTCAGAGTC SAV1646 1757087 - 1756767 - | hypothetical protein rplU 1757401 - 1757093 - | 50S ribosomal protein L21 TERM 1766 1757660 - 1757670 + r 75 -4 -5.20328 | overlap 1757641 GACGACGTTTCATGT CAAT GTC ATTG TTTGTTTTTTTAAGG SAV1648 1758167 - 1757637 - | cell shape determinant mreD SAV1649 1759009 - 1758167 - | cell shape determinant mreC SAV1650 1759874 - 1759401 - | hypothetical protein SAV1651 1760034 - 1760231 + | hypothetical protein SAV1652 1760632 - 1760348 - | hypothetical protein TERM 1767 1760927 - 1760974 + r 76 -2.8 -5.57396 | opp_overlap 1760931, overlap 1760928 1760930 1760931 TATTTCAAAAATAGT AAAACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGCTGA TTTTTTATTCATTGT TERM 1768 1760930 - 1760971 + r 76 -8.9 -3.51774 | opp_overlap 1760931, overlap 1760928 1760927 1760931 TTCAAAAATAGTAAA ACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGC TGATTTTTTATTCAT TERM 1769 1760931 - 1760970 + r 100 -12.4 -2.69438 | opp_overlap 1760931, overlap 1760930 1760928 1760927 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA TERM 1770 1760970 - 1760931 - R 100 -14.6 -4.60746 | opp_overlap 1760930 1760928 1760927 1760931 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA SAV1653 1761723 - 1761061 - | hypothetical protein TERM 1771 1761204 - 1761226 + g 82 -4.2 -5.45652 | ATGATTTAGATGTGT TGTGATTATA AAT TCTAATCGCA TTTTTTATTCCAAAT SAV1654 1762255 - 1762082 - | hypothetical protein TERM 1772 1762214 - 1762176 - G 73 -9.2 -2.86315 | overlap 1762148 1762175 1762171 CAAATCAAAATTAAT TGGTTATAATGAAC GCTTAATGTCA GTTCATTATAACCA GTAAGGAGAAGGTTA ermA 1762257 - 1762988 + | rRNA methylase TERM 1773 1763036 - 1762995 - T 75 -7.5 -4.10552 | gap 1, opp_overlap 1762999 1763003, overlap 1762999 1763003 TTTCACTAAATTAAA GTAATAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTATT-C TTCCCAAAAATTGTT TERM 1774 1762999 - 1763033 + T 81 -9.5 -3.61894 | opp_overlap 1762999 1762995 1763003, overlap 1763003 ACTAAATTAAAGTAA TAAAGCGTTCTCT AATTTCACA AGAGGACGCTTTA TTCTTCCCAAAAATT TERM 1775 1763033 - 1762999 - T 81 -9.4 -3.66117 | opp_overlap 1762999 1763003, overlap 1762995 1763003 ACTAAATTAAAGTAA TAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTA TTCTTCCCAAAAATT TERM 1776 1763003 - 1763029 + T 71 -5.9 -4.44667 | opp_overlap 1762999 1762995 1763003, overlap 1762999 AATTAAAGTAATAAA GCGTTCTCT AATTTCACA AGAGGACGC TTTATTCTTCCCAAA TERM 1777 1763029 - 1763003 - T 71 -5.8 -4.42206 | opp_overlap 1763003 1762999, overlap 1762999 1762995 AATTAAAGTAATAAA GCGTTCTCTAAT TTC ACAAGAGGACGC TTTATTCTTCCCAAA ant(9) 1763896 - 1763114 - | O-nucleotidylltransferase tnpC 1764424 - 1764047 - | transposase C tnpB 1766323 - 1764431 - | transposase B tnpA 1767405 - 1766320 - | transposase A truncated-radC 1768078 - 1767524 - | DNA repair protein RadC-like protein SAV1661 1768782 - 1768075 - | hypothetical protein TERM 1778 1769037 - 1768992 - R 82 -5 -5.34555 | gap 1, opp_overlap 1769009 TTAGAGCATAAAAAA TAACCATGAAG-CTCTACCTA TTGAT TAAATAGATTCTTCATGGCTA TTTTAGTTTTAGTTT folC 1770323 - 1769052 - | folylpolyglutamate synthase valS 1772966 - 1770336 - | valyl-tRNA synthetase TERM 1779 1770877 - 1770895 + g 70 -4.6 -4.67943 | overlap 1770879 ATTGTGTCACCTTCA TGTGGTAA ACT TTGCCATA TTTTCTCTGTTACAA TERM 1780 1773023 - 1772994 - H 100 -10.2 -5.86609 | opp_overlap 1772994 1772996, overlap 1773013 1773018 CTAAAAAAATAAAAA TATCCATCCTAT ATACAA ATAGGACGGATA TTCCGTGGTACCACC tag 1773369 - 1773929 + | DNA-3-methyladenine glycosidase SAV1665 1775225 - 1774152 - | hypothetical protein SAV1666 1775348 - 1775259 - | hypothetical protein TERM 1781 1775377 - 1775407 + r 71 -6.8 -3.98204 | opp_overlap 1775381, overlap 1775378 1775381 CCTGATATACATTTA AAAAGAGCCTGAAC AAA GTTCAGGCTCTCAA TTTGTCCGTATATTT TERM 1782 1775378 - 1775406 + r 79 -10.3 -2.97838 | opp_overlap 1775381, overlap 1775377 1775381 CTGATATACATTTAA AAAGAGCCTGAAC AAA GTTCAGGCTCTCA ATTTGTCCGTATATT TERM 1783 1775381 - 1775403 + r 100 -16.4 -2.71593 | opp_overlap 1775381, overlap 1775378 1775377 ATATACATTTAAAAA GAGCCTGAAC AAA GTTCAGGCTC TCAATTTGTCCGTAT TERM 1784 1775403 - 1775381 - R 100 -16.4 -4.73448 | opp_overlap 1775378 1775377 1775381 ATATACATTTAAAAA GAGCCTGAAC AAA GTTCAGGCTC TCAATTTGTCCGTAT hemL 1776707 - 1775421 - | glutamate-1-semialdehyde aminotransferase TERM 1785 1775942 - 1775926 - G 70 -7.3 -3.81027 | CCTAAGCAAGTTAAA TCTGGTG TCA CACCAAA GTAACCTTGTGCACA hemB 1777729 - 1776755 - | delta-aminolevulinic acid dehydratase hemD 1778400 - 1777732 - | uroporphyrinogen III synthase hemC 1779348 - 1778422 - | porphobilinogen deaminase hemX 1780205 - 1779390 - | hemA concentration negative effector TERM 1786 1780076 - 1780048 - G 83 -8.3 -4.40232 | ATAAAAATAGATAAA GAGATTGTTTG TAAAACC CAAACAATCCC CAATAAATATATGCC hemA 1781573 - 1780227 - | glutamyl-tRNA reductase SAV1673 1782380 - 1781790 - | GTPase EngB TERM 1787 1782462 - 1782507 + r 82 -7.8 -4.4595 | gap 1, opp_overlap 1782462, overlap 1782457 ATACATTATAAAAAA GCTCCGATCAAAGTT-AAACT ATTTG AGCGTCAACTTTGATTGGAGC TTTTCACTTTTATAA TERM 1788 1782507 - 1782462 - R 100 -10 -5.35459 | gap 1, opp_overlap 1782457 1782462 ATACATTATAAAAAA GCTCCGATCAAAGTTAA-ACT ATTTG AGCGTCAACTTTGATTGGAGC TTTTCACTTTTATAA clpX 1783796 - 1782534 - | ATP-dependent protease ATP-binding subunit TERM 1789 1783540 - 1783556 + g 83 -5.9 -5.06816 | opp_overlap 1783532 TTATAAACAGCTACA GCTAAAG ATT TTTTAGC TTTTTCTTGACCAAT TERM 1790 1783918 - 1783884 - R 100 -13.8 -3.90744 | opp_overlap 1783884 1783884 1783886, overlap 1783886 TTTTTGCTTAAAGAA TAGTAGCAGATACATA AGC TATGCATCTGCTACTC ATTTTTGTAATTTAA TERM 1791 1783884 - 1783918 + r 93 -11.6 -3.6151 | opp_overlap 1783884 1783886, overlap 1783884 1783886 TTTTTGCTTAAAGAA TAGTAGCAGATACATA AGC TATGCATCTGCTACTC ATTTTTGTAATTTAA TERM 1792 1783884 - 1783919 + r 100 -10 -5.05228 | gap 1, opp_overlap 1783884 1783886, overlap 1783884 1783886 TTTTTGCTTAAAGAA T-AGTAGCAGATACATA AGC TATGCATCTGCTACTCA TTTTTGTAATTTAAT TERM 1793 1783886 - 1783916 + r 100 -14.2 -3.36613 | opp_overlap 1783886 1783884, overlap 1783884 1783884 TTTGCTTAAAGAATA GTAGCAGATACATA AGC TATGCATCTGCTAC TCATTTTTGTAATTT TERM 1794 1783916 - 1783886 - R 100 -16.4 -3.54488 | opp_overlap 1783884 1783884 1783886, overlap 1783884 TTTGCTTAAAGAATA GTAGCAGATACATA AGC TATGCATCTGCTAC TCATTTTTGTAATTT tig 1785248 - 1783947 - | trigger factor SAV1676 1786340 - 1785411 - | hypothetical protein TERM 1795 1785645 - 1785656 + g 74 -3 -5.31519 | opp_overlap 1785645 TAATGTTTCCATAAC GTTA GGTA TAAC TTTTTCTTTCAGTGT TERM 1796 1786014 - 1786033 + g 72 -8 -3.4489 | overlap 1786009 TTTGTGATCTTTGAC TTCATCAA TAAT TTGATGAA TTACTTCTACCGCTT SAV1677 1786967 - 1786359 - | hypothetical protein TERM 1797 1787074 - 1787092 + r 86 -7.4 -5.30686 | opp_overlap 1787074, overlap 1787064 TAAAAAAATAAAAAA GAGATGAC AAT GCCATCTC TTTTTTATAAGTGTT TERM 1798 1787092 - 1787074 - R 100 -9.6 -6.12458 | opp_overlap 1787064 1787074 TAAAAAAATAAAAAA GAGATGAC AAT GCCATCTC TTTTTTATAAGTGTT rplT 1787465 - 1787109 - | 50S ribosomal protein L20 rpmI 1787712 - 1787512 - | 50S ribosomal protein L35 infC 1788259 - 1787741 - | translation initiation factor IF-3 TERM 1799 1788335 - 1788305 - R 100 -19.2 -4.90266 | opp_overlap 1788305 1788309 TGCACCAAGCAAAAA GGAAGAGCAGGTAT AAA ATACCCGCTCTTCC TTATACACAGTTATG TERM 1800 1788305 - 1788335 + r 100 -17 -3.31799 | opp_overlap 1788305, overlap 1788309 TGCACCAAGCAAAAA GGAAGAGCAGGTAT AAA ATACCCGCTCTTCC TTATACACAGTTATG TERM 1801 1788309 - 1788331 + r 83 -10.6 -3.44325 | opp_overlap 1788305, overlap 1788305 CCAAGCAAAAAGGAA GAGCAGGTAT AAA ATACCCGCTC TTCCTTATACACAGT SAV1681 1789990 - 1788497 - | putative amino-acid permease TERM 1802 1790120 - 1790090 - R 100 -12 -5.48054 | opp_overlap 1790090 ATTAAAAGTAAAAAA GTGGCTACATACCT TTA AGATATGCAACCAC TTTGGCAATTATCTA thrS 1792353 - 1790416 - | threonyl-tRNA synthetase TERM 1803 1792526 - 1792502 - R 100 -10 -6.12458 | GAAAAAAACAAAAAA TCCCGCCCCT ATACA AGGGACGAGA TCGTCGTGGTACCAC dnaI 1793686 - 1792766 - | primosomal protein DnaI dnaB 1795086 - 1793686 - | chromosome replication initiation/membrane attachment protein SAV1686 1795557 - 1795087 - | transcriptional regulator NrdR TERM 1804 1795751 - 1795728 - R 100 -11.8 -6.04324 | opp_overlap 1795725 TTAAAAAATAAAAAA CCTAACTCCG AAGT CAGAGTTAGG CTATAAATTAATTGT gapB 1796793 - 1795768 - | glyceraldehyde 3-phosphate dehydrogenase 2 TERM 1805 1796877 - 1796888 + r 71 -3 -5.24531 | AAAGCGTTTTCCGTT GATA TATT TATC TTTTTTATAAAAAAT TERM 1806 1796947 - 1796903 - R 79 -5.3 -5.24129 | gap 1, opp_overlap 1796905, overlap 1796905 CTTTTTTATAAAAAA TAGTCATTACT-TACATACA TCAACG CGTACGTAAAGTAATGACTT ATTTATAGTGTAATA TERM 1807 1796945 - 1796905 - R 79 -7.9 -4.25873 | gap 1, opp_overlap 1796905, overlap 1796903 TTTTTATAAAAAATA GTCATTACT-TACATACA TCAACG CGTACGTAAAGTAATGAC TTATTTATAGTGTAA SAV1688 1797586 - 1796963 - | dephospho-CoA kinase SAV1689 1798474 - 1797602 - | formamidopyrimidine-DNA glycosylase polA 1801120 - 1798490 - | DNA polymerase I TERM 1808 1800506 - 1800522 + g 74 -5.9 -4.52589 | overlap 1800508 TGTGTCAAATTGGTT TAGCAAT TTT ATTGCTG TTTTCTCTCCAACAC TERM 1809 1800639 - 1800667 + g 76 -4 -5.23316 | gap 1, opp_overlap 1800639 1800648 TCCGCAATAAAGTCA GGTGTATAATGAT CAAC ATCAGTA-ACACC TTTTTTAGTGTAATA SAV1691 1802901 - 1801414 - | hypothetical protein phoR 1805064 - 1803400 - | alkaline phosphatase synthesis sensor protein phoP 1805765 - 1805061 - | alkaline phosphatase synthesis transcriptional regulatory protein TERM 1810 1805975 - 1805987 + r 72 -6.3 -4.25458 | CCCACTACCTATGCA TGAGT TTT ACTCA TTTATTCCTAAGCTT TERM 1811 1806140 - 1806107 - R 100 -10.4 -4.68424 | opp_overlap 1806107 CAATTCATTTAAAAA GGCGAACCTAGCAA TTAAAG TTGCTAGACTCACC TAATTTTATTTTGCT citC 1807423 - 1806155 - | isocitrate dehydrogenase citZ 1808593 - 1807472 - | methylcitrate synthase aapA 1808941 - 1810302 + | D-serine/D-alanine/glycine transporter TERM 1812 1810315 - 1810346 + T 100 -12.4 -4.9725 | opp_overlap 1810303 TAACAACAAGTTTTA CCCCTGTTGAATAT ACTA AAGTTCAACAGGGG TTTTTATATGCAACT TERM 1813 1810607 - 1810637 + T 100 -8.4 -5.66684 | opp_overlap 1810607 AGATGAACCAAAAAA CGCCTTTCCATT GTTGATA AATGGAAAGACG TTTTTTTATAAATTA TERM 1814 1810637 - 1810607 - T 100 -10.6 -5.31059 | opp_overlap 1810607 AGATGAACCAAAAAA CGCCTTTCCATT GTTGATA AATGGAAAGACG TTTTTTTATAAATTA pykA 1812407 - 1810650 - | pyruvate kinase TERM 1815 1811106 - 1811124 + g 80 -10.4 -3.00923 | overlap 1811083 1811099 AACAGCTGTTGCAAC TGCATTGT TTA ACAATGCA TCTGTACTCTTACGC pfkA 1813352 - 1812429 - | 6-phosphofructokinase TERM 1816 1813536 - 1813557 + H 82 -4.4 -5.52384 | overlap 1813539 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 1817 1814953 - 1814923 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 1813637 - 1814956 + | transposase TERM 1818 1815085 - 1815056 - T 100 -10.2 -5.64006 | opp_overlap 1815056 1815071 ACTTAATTAAAAAAA GATTAGTAGCCA CAATTT TGACTACTAATC TTAGTTAAAATTCAG accA 1816130 - 1815186 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 1819 1815764 - 1815776 + g 72 -4.9 -4.78933 | CCATACCAAAATTTC GATAA ATA TTATC TTTTGTATCTTTTCC SAV1701 1816987 - 1816130 - | acetyl-CoA carboxylase subunit beta TERM 1820 1816411 - 1816423 + g 78 -7.7 -4.11394 | TATATAATAGTCCAG CGTCA GAA TGACG TTTTAAAGATACACT TERM 1821 1817094 - 1817116 + r 74 -6.4 -4.42667 | TATTCGTTTGACTGT TGAATGTTTA TCA TAAACTTTCA TTTTCATCATTTTAA TERM 1822 1817162 - 1817178 + r 79 -5.3 -5.20333 | opp_overlap 1817165 AACTTTTAAGCAATT TAATTAA ACG TTAATTA TTTTTATTGTAAATC SAV1702 1818411 - 1817182 - | malate dehydrogenase-like protein TERM 1823 1818833 - 1818793 - R 100 -11.4 -4.34766 | opp_overlap 1818794 1818799, overlap 1818794 AAAAACTAATATAAA CGCAAACTGATGGTTAAA AAATA TCTAACCATCAGTTTACT ATATCATAATTTATT TERM 1824 1818832 - 1818794 - R 100 -14.9 -3.18419 | opp_overlap 1818794 1818799, overlap 1818793 AAAACTAATATAAAC GCAAACTGATGGTTAAA AAATA TCTAACCATCAGTTTAC TATATCATAATTTAT TERM 1825 1818794 - 1818832 + r 79 -10.5 -2.99874 | opp_overlap 1818794 1818793, overlap 1818799 AAAACTAATATAAAC GCAAACTGATGGTTAAA AAATA TCTAACCATCAGTTTAC TATATCATAATTTAT TERM 1826 1818799 - 1818827 + r 82 -9 -3.89956 | opp_overlap 1818794 1818793, overlap 1818794 TAATATAAACGCAAA CTGATGGTTAAA AAATA TCTAACCATCAG TTTACTATATCATAA dnaE 1822058 - 1818861 - | DNA polymerase III, alpha chain TERM 1827 1819066 - 1819079 + g 74 -3.1 -5.29445 | CTAATTATAATTTGT TTGGC AAAT GCTAA TTTTTGTTCTTCAAA TERM 1828 1819376 - 1819389 + g 77 -5.3 -5.00895 | opp_overlap 1819374, overlap 1819374 ATATCGTTAAATATT GTTTG GCAA CAAAC TTTTTATCTACTGGG SAV1704 1823020 - 1822079 - | hypothetical protein TERM 1829 1823236 - 1823218 - R 81 -10.3 -3.12606 | CTACAGACGATGCAA GTTGGGG TGGGG CCCCAAC ACAAAGAATTTCGAA TERM 1830 1823260 - 1823242 - R 70 -6.1 -4.1891 | GGGCCCCAACACAAA GAATTTC GAAAA GAAATTC TACAAACAATGTAAG SAV1705 1824630 - 1823332 - | thioesterase family protein SAV1706 1824835 - 1825248 + | hypothetical protein SAV1707 1826242 - 1825553 - | putative metal-dependent hydrolase TERM 1831 1826639 - 1826661 + G 77 -5.6 -4.84529 | overlap 1826653 ACAGGTGAAATCGTT GGATATTTAG ACA CTGAAAATCC TTTTTCACTTTATCC SAV1708 1826396 - 1827472 + | Xaa-Pro dipeptidase-like protein TERM 1832 1827506 - 1827494 - T 85 -7.7 -4.82678 | GGATAAAAATGAAAA GCTTG TTA CAAGC ACATTCTCATTCAGT ald 1828907 - 1827789 - | alanine dehydrogenase TERM 1833 1828843 - 1828813 - G 70 -6.9 -3.73042 | overlap 1828811 GTTTCCACTAAAACA GTATGCCCACTTT CTACT AAAGCGTGCACAC CACTCGGTGATAAAC SAV1710 1829048 - 1829548 + | universal stress protein family protein TERM 1834 1829588 - 1829611 + T 100 -11.1 -5.74288 | opp_overlap 1829573 1829588 1829592 CTTGATCATTATGAA CCAAGTGCA ACTTTC TGCACTTGG TTTTTTATTGTTTAT TERM 1835 1829611 - 1829588 - T 95 -11.8 -3.23216 | opp_overlap 1829588, overlap 1829573 1829592 CTTGATCATTATGAA CCAAGTGCAA CTTT CTGCACTTGG TTTTTTATTGTTTAT TERM 1836 1829775 - 1829736 - T 86 -7.4 -5.23765 | gap 2, opp_overlap 1829736 CAAACAATACAAAAA GCGTCTACCT-C-CTACA TATAAT TGTAGCGGAGATAGACGC TTAATATTTATTTAA ackA 1830996 - 1829794 - | acetate kinase TERM 1837 1830885 - 1830873 - G 72 -4.9 -4.66833 | opp_overlap 1830859 CTTCAATTGTAAAAA TTGAA TCC TTCAA TCCGATTCTTTCTAT SAV1712 1832031 - 1831084 - | hypothetical protein SAV1713 1832648 - 1832154 - | thiol peroxidase SAV1714 1833516 - 1832746 - | hypothetical protein TERM 1838 1833287 - 1833275 - G 83 -6.3 -4.98672 | GCCAAAAATACAAAA CCAAA TAA TTTGG CAACAACAAATAAGT SAV1715 1834783 - 1833560 - | thiamine biosynthesis protein SAV1716 1835922 - 1834783 - | iron-sulfur cofactor synthesis protein nifZ TERM 1839 1836225 - 1836195 - R 100 -13.4 -5.72616 | opp_overlap 1836194 1836193 1836198 ATCCATATAAAAAAA GAAGCTAGACAACG TAT CGTTGGCTAACTTC AATTATTAAACTCAT SAV1717 1837989 - 1836295 - | septation ring formation regulator EzrA SAV1718 1838126 - 1838590 + | hypothetical protein rpsD 1838834 - 1839436 + | 30S ribosomal protein S4 TERM 1840 1839469 - 1839452 - f 100 -11.3 -4.19624 | opp_overlap 1839452 TACGTTCAATACAAA CACCCAC AATT GTGGGTG TTTTTTTTATTAATT TERM 1841 1839452 - 1839469 + F 100 -11.3 -6.15536 | opp_overlap 1839452 TACGTTCAATACAAA CACCCAC AATT GTGGGTG TTTTTTTTATTAATT TERM 1842 1839527 - 1839548 + F 82 -4.4 -5.52384 | overlap 1839530 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 1843 1840944 - 1840914 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 1839628 - 1840947 + | transposase SAV1721 1841915 - 1841172 - | glycerophosphoryl diester phosphodiesterase TERM 1844 1841488 - 1841498 + g 83 -6.8 -4.87892 | TGTATAACTACTTGT GTCG CAT CGAC TTTCTTTTCTTCCAA SAV1722 1841995 - 1842441 + | hypothetical protein TERM 1845 1842451 - 1842485 + F 100 -8.9 -5.51165 | gap 1, opp_overlap 1842445, overlap 1842445 AAATAAAATCGTTAC GTGATAACGTT-TATT CGAC AATATAGCGTTATCAC TTTTTTTAGGCTTTT SAV1723 1842556 - 1843713 + | transaminase serA 1843700 - 1845304 + | D-3-phosphoglycerate dehydrogenase TERM 1846 1845326 - 1845365 + T 100 -13.1 -5.37865 | gap 1, opp_overlap 1845326 TATGTAAATTCAAAA TGCCAAGAAGACATTGGA TTACT TCCATTG-CTTCTTGGCA TTTTTTCATTATTAA TERM 1847 1845365 - 1845326 - T 100 -13.1 -4.36595 | gap 1, opp_overlap 1845326 TATGTAAATTCAAAA TGCCAAGAAGACATTGGA TTACT TCCATTG-CTTCTTGGCA TTTTTTCATTATTAA SAV1725 1846584 - 1845454 - | hypothetical protein TERM 1848 1846674 - 1846645 - R 86 -5 -5.52986 | ATTTGACTAAAAAAA GCGCAAACCCTA TTGAAG TTAGATTTGCGC TTTAGCTGTTTAAAT ptaA 1848157 - 1846691 - | PTS system, N-acetylglucosamine-specific IIABC component SAV1727 1848902 - 1848285 - | acylglycerol-3-phosphate O-acyltransferase-like SAV1728 1849074 - 1850348 + | serine proteinase Do TERM 1849 1850422 - 1850364 - T 73 -5.8 -4.64844 | gap 3, opp_overlap 1850370 1850373, overlap 1850365 1850373 TTTACAGACAGAAAA GTACATTAAGAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTCT-AATTTA- TTTAGCTATGCAATT TERM 1850 1850422 - 1850365 - T 95 -11.8 -3.38183 | opp_overlap 1850370 1850373, overlap 1850364 1850373 TTACAGACAGAAAAG TACATTAAGAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTCT-AATTTA TTTAGCTATGCAATT TERM 1851 1850370 - 1850418 + T 100 -14.2 -4.48299 | gap 1, opp_overlap 1850364 1850365 1850373, overlap 1850373 GACAGAAAAGTACAT TAAGAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTCTAA TTTATTTAGCTATGC TERM 1852 1850415 - 1850373 - T 100 -15.9 -3.38134 | gap 1, opp_overlap 1850370 1850373, overlap 1850364 1850365 AGAAAAGTACATTAA GAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTC TAATTTATTTAGCTA TERM 1853 1850373 - 1850415 + T 100 -15.9 -3.19523 | gap 1, opp_overlap 1850373 1850364 1850365, overlap 1850370 AGAAAAGTACATTAA GAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTC TAATTTATTTAGCTA tyrS 1851704 - 1850442 - | tyrosyl-tRNA synthetase TERM 1854 1851803 - 1851781 - H 100 -7.8 -5.86332 | TGAACGTAAAAAAAA CCCTTACA ACAAATA TGTAAGGG CGCGATTGCACGTTA sgtA 1852086 - 1852991 + | transglycosylase TERM 1855 1853040 - 1853087 + T 82 -5.1 -5.35815 | gap 1, opp_overlap 1853043, overlap 1853043 GCATCCAAATATTAA AAACAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTGTTC TTTTTATTTACTCTA TERM 1856 1853043 - 1853084 + T 80 -6.8 -4.74052 | gap 1, opp_overlap 1853043, overlap 1853040 TCCAAATATTAAAAA CAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTG TTCTTTTTATTTACT TERM 1857 1853084 - 1853043 - T 93 -9 -4.93696 | gap 1, opp_overlap 1853040 1853043 TCCAAATATTAAAAA CAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTG TTCTTTTTATTTACT SAV1731 1855869 - 1853194 - | hypothetical protein TERM 1858 1854405 - 1854432 + g 70 -3.6 -4.93318 | gap 1, overlap 1854399 1854405 1854407 CTTGTCTTTCTAACG TT-TTAGCTTTGT GAT ACGGAGCTAATAA TTTTTGTAAATTGTA TERM 1859 1856154 - 1856119 - R 84 -7 -5.23316 | gap 1, overlap 1856096 TAGCACAGCAAAAAA CCGAACTGCT-GAAATA ATG CATCTCCAACAGTCCGG TCTATTAAACTATTT fhs 1857869 - 1856202 - | formate--tetrahydrofolate ligase TERM 1860 1857140 - 1857152 + g 78 -7.7 -4.2349 | opp_overlap 1857134, overlap 1857135 TTAAAATCATTGCAA GTGCA CCT TGCAC TTTTAAATCTGCAAC acsA 1860015 - 1858309 - | acetyl-CoA synthetase acuA 1860184 - 1860816 + | acetoin dehydrogenase-like protein acuC 1860841 - 1862010 + | acetoin utilization protein TERM 1861 1862046 - 1862097 + T 70 -5.2 -4.53707 | gap 1, opp_overlap 1862049, overlap 1862047 1862049 TTTAAAAGATAAATA AAAGGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCCTAA TTTTGTGAATTTATT TERM 1862 1862047 - 1862096 + T 74 -8.7 -3.30597 | gap 1, opp_overlap 1862049, overlap 1862046 1862049 TTAAAAGATAAATAA AAGGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCCTA ATTTTGTGAATTTAT TERM 1863 1862049 - 1862094 + T 91 -11.3 -3.20462 | gap 1, opp_overlap 1862049, overlap 1862047 1862046 AAAAGATAAATAAAA GGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCC TAATTTTGTGAATTT TERM 1864 1862094 - 1862049 - T 100 -13.5 -5.15682 | gap 1, opp_overlap 1862049 1862047 1862046 AAAAGATAAATAAAA GGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCC TAATTTTGTGAATTT ccpA 1863052 - 1862108 - | catabolite control protein A TERM 1865 1862388 - 1862398 + g 71 -6.8 -4.19735 | CATAAAATGGCATCT GGCA AAT TGCC TTTCATTTTAGCAAA TERM 1866 1863514 - 1863556 + r 71 -8.6 -2.81291 | opp_overlap 1863514 1863517 1863519, overlap 1863513 1863517 TTTCTATACAAAAAA TAATAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTGTAA GTTTAAAATTGTCGA TERM 1867 1863556 - 1863514 - R 100 -10.8 -5.36441 | opp_overlap 1863514 1863513 1863517, overlap 1863517 1863519 TTTCTATACAAAAAA TAATAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTGTAA GTTTAAAATTGTCGA TERM 1868 1863517 - 1863553 + r 78 -10.3 -2.66593 | opp_overlap 1863514 1863517 1863519, overlap 1863514 1863513 CTATACAAAAAATAA TAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTG TAAGTTTAAAATTGT TERM 1869 1863553 - 1863517 - R 100 -12.5 -4.77122 | opp_overlap 1863517 1863514 1863513, overlap 1863514 1863519 CTATACAAAAAATAA TAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTG TAAGTTTAAAATTGT TERM 1870 1863551 - 1863519 - R 100 -15.1 -3.97741 | opp_overlap 1863517 1863514 1863513, overlap 1863517 1863514 ATACAAAAAATAATA GCCACTCTAAAAGTA ATA TACTCTTAGAATGGC TGTAAGTTTAAAATT SAV1737 1864728 - 1863637 - | bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase TERM 1871 1864686 - 1864700 + g 77 -8.6 -3.65671 | AAATTTGATGATTCA GTGAGA CAA TCTCAC TTCTGTATGATTCTA TERM 1872 1865184 - 1865200 + r 71 -4.5 -4.74706 | CTAAGATTCATTGTT TATTTGA TTA TCGAATA TTTTTCCATCTTCAG TERM 1873 1865321 - 1865342 + r 72 -4.4 -5.10163 | opp_overlap 1865321, overlap 1865316 GATGATATCAAAAAA GGTAAGCA CCTGAA TGCCTACC TTTTATTTTGAAATT TERM 1874 1865342 - 1865321 - R 86 -7.3 -5.23316 | opp_overlap 1865321 1865316 GATGATATCAAAAAA GGTAAGCAC CTGA ATGCCTACC TTTTATTTTGAAATT SAV1738 1866780 - 1865422 - | hypothetical protein TERM 1875 1866799 - 1866841 + r 100 -13.8 -4.11412 | opp_overlap 1866799 1866803, overlap 1866803 TATATCCTCCTATAA CAAATGCACTTAAATAAG TAACAAC CTCATTTAAGTGCATTTG TTTAATTATTAATTA TERM 1876 1866841 - 1866799 - R 100 -16 -3.29829 | opp_overlap 1866799 1866803, overlap 1866803 TATATCCTCCTATAA CAAATGCACTTAAATAAG TAACAAC CTCATTTAAGTGCATTTG TTTAATTATTAATTA TERM 1877 1866837 - 1866803 - R 100 -11 -4.30719 | opp_overlap 1866799 1866803, overlap 1866799 TCCTCCTATAACAAA TGCACTTAAATAAG TAACAAC CTCATTTAAGTGCA TTTGTTTAATTATTA TERM 1878 1866803 - 1866837 + r 89 -8.8 -4.62392 | opp_overlap 1866803 1866799, overlap 1866799 TCCTCCTATAACAAA TGCACTTAAATAAG TAACAAC CTCATTTAAGTGCA TTTGTTTAATTATTA SAV1739 1867345 - 1866854 - | hypothetical protein murC 1868732 - 1867419 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1879 1868564 - 1868584 + g 73 -4.1 -4.88388 | TATCTTCTTTTATGT TATTAGCAT CAA ATGGTAATA TTTTTATCCCCTTAT SAV1741 1872580 - 1868756 - | DNA translocase stage III sporulation prot-like protein TERM 1880 1872282 - 1872292 + g 70 -4.6 -4.82901 | GTTTGATTTCTTCTA CGGC GAT GTCG TTTTTGTGAACGAGA SAV1742 1873197 - 1872601 - | phenylalanyl-tRNA synthetase-like protein SAV1743 1874083 - 1873226 - | hypothetical protein TERM 1881 1874175 - 1874142 - R 93 -11.2 -3.38297 | opp_overlap 1874144 1874146, overlap 1874144 1874153 ATCAACACATAGTAA CAGAGAAAAACGAG TATTAC CCCGTTTTTCTCTA GTCTAAATTACACAT TERM 1882 1874144 - 1874173 + r 73 -9.4 -2.66733 | opp_overlap 1874142 1874144 1874153, overlap 1874146 CAACACATAGTAACA GAGAAAAACGAG TATTAC CCCGTTTTTCTC TAGTCTAAATTACAC TERM 1883 1874173 - 1874144 - R 93 -11.6 -3.25307 | opp_overlap 1874144 1874146, overlap 1874142 1874153 CAACACATAGTAACA GAGAAAAACGAG TATTAC CCCGTTTTTCTC TAGTCTAAATTACAC SAV1744 1874494 - 1874183 - | thioredoxin-like protein SAV1745 1875635 - 1874559 - | endo-1,4-beta-glucanase-like protein SAV1746 1875722 - 1876033 + | hypothetical protein TERM 1884 1876115 - 1876078 - T 100 -10.1 -4.87318 | gap 1, opp_overlap 1876078 CGTAAAACTTAAAAA TGAGCCACACCCTAAT TAGTAAG ATT-GGATGTGGCTCA TTTTTTTATTTTTGA TERM 1885 1876078 - 1876115 + T 100 -8.6 -6.20267 | gap 1, opp_overlap 1876078 CGTAAAACTTAAAAA TGAGCCACACCCTAATT AGTAA GATT-GGATGTGGCTCA TTTTTTTATTTTTGA SAV1747 1877000 - 1876158 - | metal-dependent hydrolase TERM 1886 1877386 - 1877345 - R 85 -5.9 -5.46698 | opp_overlap 1877345 TTCAAAATCAAAAAA TCGGACAGATGAAAAGTAA AATA CTTTTTTCCATCAGTCCGA TTTATTATAGAACCT TERM 1887 1877428 - 1877473 + r 100 -10.7 -4.87665 | opp_overlap 1877433, overlap 1877433 ACCATTATAGTACGA AAAAACACTTATGATTGTATG TGTA CATACCCTCATAAGTGTTTTA TTTTTGTGAATGGAA TERM 1888 1877433 - 1877468 + r 100 -10.6 -5.35224 | opp_overlap 1877433, overlap 1877428 TATAGTACGAAAAAA CACTTATGATTGTATG TGTA CATACCCTCATAAGTG TTTTATTTTTGTGAA TERM 1889 1877468 - 1877433 - R 100 -10.6 -5.20216 | opp_overlap 1877433 1877428 TATAGTACGAAAAAA CACTTATGATTGTATG TGTA CATACCCTCATAAGTG TTTTATTTTTGTGAA SAV1748 1878115 - 1877471 - | tRNA (guanine-N(7)-)-methyltransferase TERM 1890 1877727 - 1877717 - G 74 -5.4 -4.69622 | overlap 1877708 ATACAACGCTAAAAA CGTA TGA TACG TTAAACGTCGTTTTG SAV1749 1878921 - 1878130 - | hypothetical protein TERM 1891 1878950 - 1878979 + r 78 -9.4 -3.25809 | opp_overlap 1878950, overlap 1878948 1878942 CTTTCAATTAGAAAA TGGCTCTAGAAA TAGGTT TTTCAAGAGCCA TATATTCTAATTTAT TERM 1892 1878979 - 1878950 - R 100 -9.4 -4.5442 | opp_overlap 1878950 1878948 1878942 CTTTCAATTAGAAAA TGGCTCTAGAAA TAGGTT TTTCAAGAGCCA TATATTCTAATTTAT SAV1750 1880319 - 1879471 - | D-alanine aminotransferase SAV1751 1881732 - 1880323 - | dipeptidase PepV TERM 1893 1882270 - 1882227 - R 100 -12.9 -3.22476 | gap 1, opp_overlap 1882227 1882228 1882230 1882234 1882237, overlap 1882228 1882234 1882237 ATTAGCTATGACTAA CGATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATCA TTTCTGTCCTACTCA TERM 1894 1882227 - 1882270 + r 100 -10.7 -4.10164 | gap 1, opp_overlap 1882227 1882228 1882234 1882237, overlap 1882228 1882230 1882234 1882237 ATTAGCTATGACTAA CGATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATCA TTTCTGTCCTACTCA TERM 1895 1882228 - 1882269 + r 100 -14.2 -3.05616 | gap 1, opp_overlap 1882228 1882227 1882234 1882237, overlap 1882227 1882230 1882234 1882237 TTAGCTATGACTAAC GATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATC ATTTCTGTCCTACTC TERM 1896 1882269 - 1882228 - R 100 -14.2 -2.53164 | gap 1, opp_overlap 1882227 1882228 1882230 1882234 1882237, overlap 1882227 1882234 1882237 TTAGCTATGACTAAC GATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATC ATTTCTGTCCTACTC TERM 1897 1882230 - 1882267 + r 85 -11 -3.07876 | gap 1, opp_overlap 1882228 1882227 1882234 1882237, overlap 1882228 1882227 1882234 1882237 AGCTATGACTAACGA TAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTA TCATTTCTGTCCTAC TERM 1898 1882234 - 1882263 + r 75 -7.4 -4.19307 | gap 1, opp_overlap 1882234 1882228 1882227 1882237, overlap 1882230 1882228 1882227 1882237 ATGACTAACGATAAA GAACCACTAT-AT AATAA ATCATAGTGGTTC TTTATCATTTCTGTC TERM 1899 1882263 - 1882234 - R 75 -7.4 -4.08546 | gap 1, opp_overlap 1882230 1882228 1882227 1882234 1882237, overlap 1882228 1882227 1882237 ATGACTAACGATAAA GAACCACTAT-AT AATAA ATCATAGTGGTTC TTTATCATTTCTGTC SAV1752 1882712 - 1882290 - | hypothetical protein SAV1753 1883424 - 1882729 - | 16S psudouridylate synthase SAV1754 1885082 - 1883421 - | spore cortex protein SAV1755 1885489 - 1886391 + | NAD(FAD)-utilizing dehydrogenase SAV1756 1886366 - 1886638 + | hypothetical protein TERM 1900 1886697 - 1886745 + T 82 -8.7 -4.02535 | gap 3, opp_overlap 1886697 TCATTCAATTAAAAA TGACCTTAATATAACTGAGTCACT AAAA AGTG--TC-GTTATATTAAGGTCA TTTCGTTAATTATGA TERM 1901 1886745 - 1886697 - T 93 -8.7 -4.88407 | gap 3, opp_overlap 1886697 TCATTCAATTAAAAA TGACCTTAATATAACTGAGTCACT AAAA AGTG--TC-GTTATATTAAGGTCA TTTCGTTAATTATGA mrp 1887363 - 1886755 - | Mrp protein mrp 1893314 - 1887363 - | Mrp protein TERM 1902 1890514 - 1890542 + g 73 -7.3 -3.98826 | overlap 1890519 1890532 GCGTTTAAAATGTTT GTGTTTGCTGCAG TTA CAGCAGCATTCAC TTTGTCAATTGCTGC TERM 1903 1890519 - 1890537 + g 75 -8.8 -3.34113 | overlap 1890514 1890532 TAAAATGTTTGTGTT TGCTGCAG TTA CAGCAGCA TTCACTTTGTCAATT TERM 1904 1893599 - 1893572 - R 100 -10.7 -5.22312 | opp_overlap 1893572 1893574 ATTCATACCAAAAAA CACCAAGCAAC CGAAAC GTTACTTGGTG TCATTACAAATGTAA SAV1759 1893951 - 1893640 - | hypothetical protein TERM 1905 1893909 - 1893919 + g 76 -4 -5.31059 | GAACTGGTTTAGATT CAAA AAG TTTG TTTTTTAATTCATCT leuS 1896387 - 1893973 - | leucyl-tRNA synthetase TERM 1906 1896312 - 1896326 + g 73 -3.6 -5.13722 | overlap 1896321 TTTGACCTAAGTTAT CATTTG TTT TAAATG TTTTATTTTCGTCCC SAV1761 1897859 - 1896678 - | multidrug resistance protein SAV1762 1897969 - 1898922 + | hypothetical protein SAV1763 1898919 - 1899482 + | hypothetical protein TERM 1907 1899595 - 1899553 - T 91 -11 -3.83758 | gap 1, opp_overlap 1899562, overlap 1899562 AATTAATACCAACAA CAACAAAAAGAGGTTTTCA ACTTAA TGAAAACCTCTTTTTAT-G CTATTAAACTTACAC TERM 1908 1899562 - 1899587 + T 100 -10.6 -4.98436 | opp_overlap 1899553 1899562 CAACAACAACAAAAA GAGGTTTTCA ACTTAA TGAAAACCTC TTTTTATGCTATTAA TERM 1909 1899587 - 1899562 - T 100 -10.6 -5.3798 | opp_overlap 1899562, overlap 1899553 CAACAACAACAAAAA GAGGTTTTCA ACTTAA TGAAAACCTC TTTTTATGCTATTAA rot 1900066 - 1899605 - | repressor of toxins Rot TERM 1910 1900564 - 1900543 - R 87 -3.8 -5.88061 | gap 1, opp_overlap 1900543 AAAAAAGTAAAAAAA GATGAG-CA TCTAC TGTCTCATC TTTTTAGAATATTAA SAV1765 1901403 - 1900576 - | lysophospholipase-like protein TERM 1911 1901728 - 1901706 - g 82 -4.1 -5.54894 | gap 1, overlap 1901707 AACGCAGCAAAAAAA GTGG-GCCCA CGTT TGGGCGCCAA TAAAGTCGTTGCCGG TERM 1912 1901727 - 1901707 - g 76 -7.6 -3.9131 | gap 1, overlap 1901706 ACGCAGCAAAAAAAG TGG-GCCCA CGTT TGGGCGCCA ATAAAGTCGTTGCCG TERM 1913 1902569 - 1902599 + G 70 -8.4 -3.29324 | opp_overlap 1902575, overlap 1902580 CTTAAAACGTGTTGG CATAATTGCAGCTT TAG GAGCTACAGTTATG TTAGGTTTAAGTACA SAV1766 1901637 - 1902638 + | proline dehydrohenase-like protein TERM 1914 1902656 - 1902701 + T 95 -12.1 -3.67498 | opp_overlap 1902658, overlap 1902658 CATGGCATAAACAAT AATTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAATG TTATATTGGCAGTTC TERM 1915 1902658 - 1902699 + T 100 -14.7 -3.41292 | opp_overlap 1902658, overlap 1902656 TGGCATAAACAATAA TTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAA TGTTATATTGGCAGT TERM 1916 1902699 - 1902658 - T 95 -10.3 -4.15703 | opp_overlap 1902656 1902658 TGGCATAAACAATAA TTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAA TGTTATATTGGCAGT SAV1767 1903224 - 1902760 - | lumazine synthase ribA 1904418 - 1903237 - | riboflavin biosynthesis protein ribB 1905061 - 1904429 - | riboflavin synthase subunit alpha ribD 1906111 - 1905068 - | riboflavin specific deaminase TERM 1917 1906163 - 1906135 - R 81 -4.6 -5.38054 | CTCTATAAACAAAAA TCCTCACATCAT GAATT AAGATGCAAGGA GAAAAATTTATCGTT SAV1772 1908094 - 1906592 - | hypothetical protein TERM 1918 1908438 - 1908402 - H 83 -10.3 -3.44891 | opp_overlap 1908402, overlap 1908398 1908393 1908394 AATAAATTCAACTAA GGTGATTGGCCATAC ACTCAAG ATATGGCTAATCACC TTTTTCAATGCAAAA TERM 1919 1908402 - 1908438 + H 100 -11.8 -4.65895 | opp_overlap 1908398 1908393 1908394 1908402 AATAAATTCAACTAA GGTGATTGGCCATA CACTCAAGA TATGGCTAATCACC TTTTTCAATGCAAAA SAV1773 1908617 - 1908931 + | arsenical resistance operon repressor-like protein TERM 1920 1909586 - 1909572 - g 74 -6.4 -4.37544 | opp_overlap 1909571 TGATAATAATATAAA GCATCC TAA AGATGC CATTAATGATTTAAA SAV1774 1908931 - 1910223 + | aesenical pump membrane protein TERM 1921 1910265 - 1910234 - T 100 -11.8 -5.47159 | opp_overlap 1910228 1910234 TTTAAGAAATAAAAA GACGCTTTCTAT TTATTGCG ATAGAAAGCGTC TTTTTATACTTGAGC TERM 1922 1910234 - 1910265 + T 100 -12.5 -4.98255 | opp_overlap 1910234, overlap 1910228 TTTAAGAAATAAAAA GACGCTTTCTATT TATTGC GATAGAAAGCGTC TTTTTATACTTGAGC SAV1775 1911164 - 1910310 - | glucosaminidase TERM 1923 1911434 - 1911420 - R 70 -3.6 -5.1675 | opp_overlap 1911420 TCACGTATTAAAAAA CAAAAA ATT CTTTTG TTCGTTTACTTAGTT SAV1776 1911664 - 1911440 - | hypothetical protein SAV1777 1911863 - 1912333 + | hypothetical protein TERM 1924 1912732 - 1912701 - g 81 -7.4 -4.45168 | opp_overlap 1912702, overlap 1912702 CCGTTAAAACATAAA CGTGCACCGATACA AATT TATATCAATGCACA TTATATTGTTGGTAT TERM 1925 1912731 - 1912702 - g 73 -8.7 -3.26378 | opp_overlap 1912702, overlap 1912701 CGTTAAAACATAAAC GTGCACCGATACA AATT TATATCAATGCAC ATTATATTGTTGGTA SAV1778 1912446 - 1912889 + | hypothetical protein SAV1779 1913319 - 1912876 - | hypothetical protein SAV1780 1913615 - 1914250 + | hypothetical protein TERM 1926 1914671 - 1914645 - T 100 -13.8 -4.68994 | opp_overlap 1914645 ACTATGATGGAAAAA CCCCCATAAGCA CAA TGCCTATGAGGG TTTAAATATGTTTAT TERM 1927 1914645 - 1914671 + T 84 -9.4 -3.79565 | opp_overlap 1914645 ACTATGATGGAAAAA CCCCCATAAGCA CAA TGCCTATGAGGG TTTAAATATGTTTAT SAV1781 1915403 - 1914690 - | putative translaldolase TERM 1928 1915453 - 1915483 + H 74 -2.1 -5.56573 | gap 1, opp_overlap 1915468, overlap 1915457 1915468 1915474 AACAACATCTGCATG TCTTTTTCTTACAA CCAT TTGTAA-AAAATGA TTTTTATTTCTTTGT TERM 1929 1915697 - 1915716 + G 70 -2.2 -5.33405 | ACTTTTACTTATCTA GCTTAA TGATTATT TTAAGC TTTTTCTTTAATACA SAV1782 1915663 - 1915965 + | hypothetical protein TERM 1930 1916132 - 1916181 + F 76 -5.1 -5.15969 | gap 1, opp_overlap 1916132 1916148, overlap 1916149 GATATAACATATAAT GAGGTT-TGATAATGCATCGACAA TTT TTGTCGTCGTGTTGCCAAAACCTC TTTTTTAAATTCAAA SAV1783 1916143 - 1916586 + | hypothetical protein SAV1784 1916583 - 1916936 + | hypothetical protein TERM 1931 1917135 - 1917190 + F 82 -8.7 -3.91032 | gap 1, opp_overlap 1917142, overlap 1917142 GGGACATAAATCCCT AAAAAAACAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTGTTCTCTA TTTATACAATACTTC TERM 1932 1917183 - 1917142 - f 100 -15.6 -5.4477 | gap 1, opp_overlap 1917142 1917135 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1933 1917142 - 1917183 + F 100 -15.6 -3.80279 | gap 1, opp_overlap 1917142, overlap 1917135 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA SAV1785 1917398 - 1917748 + | putative transposase SAV1786 1917924 - 1918172 + | putative transposase TERM 1934 1918795 - 1918776 - gT 74 -5.8 -4.56314 | gap 1, opp_overlap 1918779, overlap 1918778 1918779 1918781 TTAATATAAGGAAAA TAGCAGCTC AAC GAGCTG-TA CATTATAAAATACAT TERM 1935 1918793 - 1918779 - gT 77 -10 -2.91057 | opp_overlap 1918779, overlap 1918778 1918776 1918781 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1936 1918779 - 1918793 + GT 76 -10 -2.60079 | opp_overlap 1918778 1918776 1918779 1918781 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1937 1918820 - 1918853 + GT 88 -6.9 -5.16572 | opp_overlap 1918820, overlap 1918822 ATACATATCAAAAAA GCTGATTTCTATCAA ATAA TTAATAGAAATCAAC TTTTTTACATTGCCT TERM 1938 1918853 - 1918820 - gT 100 -11.3 -5.25893 | opp_overlap 1918820 1918822 ATACATATCAAAAAA GCTGATTTCTATCAA ATAA TTAATAGAAATCAAC TTTTTTACATTGCCT SAV1787 1918091 - 1918870 + | putative transposase SAV1788 1919766 - 1918933 - | 2,5-didehydrogluconate reductase TERM 1939 1919970 - 1919938 - R 85 -5.6 -5.42514 | TGACAAACTAAAAAA GCCGAAGTCACAAC ATATA GTCATCACTTCAGC CTAACATTTAATTGA SAV1789 1920889 - 1919978 - | hypothetical protein TERM 1940 1920981 - 1920944 - R 74 -7.3 -3.99216 | opp_overlap 1920944, overlap 1920933 AATAGAAAAGCTAAA GATTTTCGATACATA TTATCATT TATATACCGAAAATC TTTTATTTAGCTATA metK 1922204 - 1921008 - | S-adenosylmethionine synthetase TERM 1941 1921598 - 1921631 + g 72 -9.1 -2.65876 | gap 1, opp_overlap 1921617, overlap 1921584 1921595 TCACATCATCAGCAT GT-TGTGTTGATACGA CAA TCGTATCAATACGTAC TGGGTTATCATTTTC TERM 1942 1922294 - 1922263 - H 90 -6.6 -5.65927 | GAGCTAAATAAAAAA GACCTTCTAACTAT TAAT ATAGAGAGAAGGCC TAATACGTCCATTCG TERM 1943 1922551 - 1922528 - H 72 -8.4 -3.26319 | opp_overlap 1922527 1922528 1922533, overlap 1922533 AATGTGTTATACTAA TTAAATGTAA AGGC TTACATTTAA ATTATCGCTTTGGAG pckA 1922576 - 1924168 + | phosphoenolpyruvate carboxykinase TERM 1944 1924183 - 1924229 + F 100 -10.6 -4.57353 | gap 2, opp_overlap 1924187, overlap 1924184 1924186 1924187 1924189 AATTTGAATACTAAT TAA-AG-AGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTCCTCTTA TTTTATGTGCTAAAA TERM 1945 1924184 - 1924226 + F 100 -12.9 -4.39748 | opp_overlap 1924187, overlap 1924183 1924186 1924187 1924189 ATTTGAATACTAATT AAAGAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTCCTC TTATTTTATGTGCTA TERM 1946 1924186 - 1924224 + F 100 -15.5 -3.78861 | opp_overlap 1924187, overlap 1924184 1924183 1924187 1924189 TTGAATACTAATTAA AGAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTCC TCTTATTTTATGTGC TERM 1947 1924187 - 1924223 + F 100 -19 -2.86232 | opp_overlap 1924187, overlap 1924186 1924184 1924183 1924189 TGAATACTAATTAAA GAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTC CTCTTATTTTATGTG TERM 1948 1924223 - 1924187 - f 100 -16.8 -4.00469 | opp_overlap 1924186 1924184 1924183 1924187 1924189 TGAATACTAATTAAA GAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTC CTCTTATTTTATGTG TERM 1949 1924189 - 1924221 + F 100 -15.8 -2.95962 | opp_overlap 1924187, overlap 1924187 1924186 1924184 1924183 AATACTAATTAAAGA GCCAACCGTTGTTA TAGTC TAACAATGGTTGGC TCCTCTTATTTTATG SAV1792 1924292 - 1924468 + | hypothetical protein SAV1793 1925316 - 1924546 - | hypothetical protein SAV1794 1925776 - 1925297 - | hypothetical protein SAV1795 1925836 - 1926093 + | hypothetical protein menC 1927091 - 1926090 - | o-succinylbenzoic acid synthetase TERM 1950 1926124 - 1926149 + g 100 -9.7 -4.3586 | opp_overlap 1926124 GTTATATCCACTAAA GGGGGGCGA AATTCGAG TCGCCCCTC TTTTAATATGCCTGA TERM 1951 1926149 - 1926124 - G 73 -7.5 -3.78022 | opp_overlap 1926124 GTTATATCCACTAAA GGGGGGCGA AATTCGAG TCGCCCCTC TTTTAATATGCCTGA menE 1928574 - 1927096 - | O-succinylbenzoic acid-CoA ligase SAV1798 1929215 - 1928733 - | hypothetical protein SAV1799 1929527 - 1930141 + | hypothetical protein SAV1800 1930222 - 1931217 + | hypothetical protein TERM 1952 1931222 - 1931244 + F 76 -6.2 -4.66163 | opp_overlap 1931221, overlap 1931225 CAACAGAATAAATTT TCAGGGTAGC TCA GCTACCCTTC TTTTTCGGTAAAAAT TERM 1953 1931225 - 1931241 + F 100 -12.3 -4.44608 | opp_overlap 1931221, overlap 1931222 CAGAATAAATTTTCA GGGTAGC TCA GCTACCC TTCTTTTTCGGTAAA TERM 1954 1931886 - 1931874 - g 82 -4.1 -5.44198 | AATAAAGAAGAAAAA CATGA TAA CCATG CAAAAAATTCAGCAG SAV1801 1931292 - 1931918 + | hypothetical protein SAV1802 1931959 - 1932300 + | hypothetical protein SAV1803 1932401 - 1932973 + | hypothetical protein TERM 1955 1933112 - 1933054 - T 85 -8.4 -4.4195 | opp_overlap 1933056, overlap 1933042 1933056 ATATATTTTATAAAA TAGACCACGCATACCTATCTATAAAC GGACAAT GTTTATAAATGAGTTTGCATGGTCTT GAATTGTATTAAATT TERM 1956 1933110 - 1933056 - T 91 -11 -3.81279 | opp_overlap 1933056, overlap 1933054 ATATTTTATAAAATA GACCACGCATACCTATCTATAAAC GGACAAT GTTTATAAATGAGTTTGCATGGTC TTGAATTGTATTAAA SAV1804 1933740 - 1933171 - | putative transposase SAV1805 1934016 - 1933762 - | putative transposase TERM 1957 1934366 - 1934382 + r 73 -8.7 -3.06636 | opp_overlap 1934355, overlap 1934365 1934369 CATAGCACCAGTCAT CAGTGGC TGT GCCATTG CGTTTTTTTCTTATT TERM 1958 1934450 - 1934478 + r 100 -13.3 -3.32993 | opp_overlap 1934450 CCGCACCAATAAAAA TCCCCTCACTA CCGCAAA TAGTGAGGGGA TTGGTGTATAAGTAA TERM 1959 1934478 - 1934450 - R 100 -14.7 -5.1356 | opp_overlap 1934450 CCGCACCAATAAAAA TCCCCTCACTACC GCA AATAGTGAGGGGA TTGGTGTATAAGTAA TERM 1960 1934620 - 1934652 + r 100 -9.3 -5.18355 | opp_overlap 1934628 1934633 GATGAGTTCAATATC GGAAGTTAGGCAA CTAAACA TTGCTTAGCTTCC TTTTTACTTTTTGGA tnp 1935271 - 1934771 - | transposase homolog for IS232 TERM 1961 1935098 - 1935110 + g 73 -7.7 -3.83324 | ATTTCTCTTTTTGGT TGGCT CAA AGCCA TTTAAATATTTATCA SAV1807 1936952 - 1935723 - | specificity determinant HsdS SAV1808 1938501 - 1936945 - | type I restriction enzyme EcoR124II M protein TERM 1962 1937271 - 1937289 + g 84 -6.7 -5.1101 | CGATAAATAGTACGT TGTCGTC TTGTT GGCGACA TTTTTTAAATACTAA TERM 1963 1938733 - 1938775 + r 74 -7.9 -3.7948 | opp_overlap 1938734, overlap 1938734 TCATACATAAATAAA ACCAATCAACAATTGAGTT GGTGA AAATCAATCGTTGATTGGC TTTGATGCATATTAA TERM 1964 1938734 - 1938774 + r 85 -11.4 -2.87206 | opp_overlap 1938734, overlap 1938733 CATACATAAATAAAA CCAATCAACAATTGAGTT GGTGA AAATCAATCGTTGATTGG CTTTGATGCATATTA TERM 1965 1938774 - 1938734 - R 100 -13.6 -5.07523 | opp_overlap 1938734 1938733 CATACATAAATAAAA CCAATCAACAATTGAGTT GGTGA AAATCAATCGTTGATTGG CTTTGATGCATATTA splF 1939581 - 1938862 - | serine protease splD 1940458 - 1939739 - | serine protease splC 1941298 - 1940579 - | serine protease splB 1942078 - 1941356 - | serine protease splA 1942910 - 1942203 - | serine protease TERM 1966 1943008 - 1942990 - R 72 -6.2 -4.27026 | TTTTAAATAAAAATA TTAATTAA ATA TTAATTAA CCACTTATTAACATT SAV1814 1943564 - 1943346 - | hypothetical protein TERM 1967 1943508 - 1943525 + g 87 -6.3 -5.58179 | TGGATTAGTTTCACT GACATGT TGAT GCATGTC TTTTTTGTTCTGATA TERM 1968 1944021 - 1944009 - g 82 -3.4 -5.59534 | opp_overlap 1944009 AAGCAGAAGAAAAAA TGAC AAATG GTCA ATTGTGGAAAAAAGT SAV1815 1943873 - 1944454 + | beta-lactamase TERM 1969 1944643 - 1944672 + T 77 -5.7 -4.85433 | overlap 1944646 CAGCGTTTGGCTTGC TTTGACGACATGT TCGC GCATGTCGTCTTA TTTTTACATTTATAT TERM 1970 1944646 - 1944669 + T 100 -11.8 -4.50298 | overlap 1944643 CGTTTGGCTTGCTTT GACGACATGT TCGC GCATGTCGTC TTATTTTTACATTTA TERM 1971 1944834 - 1944858 + T 71 -7.3 -3.71649 | opp_overlap 1944840, overlap 1944832 1944835 AATACCCCTGCTGTC CGAATACAAAA TTA TTTTGTATTCA TATTTATCTGTTCTC TERM 1972 1944835 - 1944857 + T 82 -10.8 -2.81905 | opp_overlap 1944840, overlap 1944834 1944832 ATACCCCTGCTGTCC GAATACAAAA TTA TTTTGTATTC ATATTTATCTGTTCT SAV1816 1945205 - 1944927 - | hypothetical protein SAV1817 1945401 - 1945874 + | hypothetical protein SAV1818 1945879 - 1946670 + | hypothetical protein TERM 1973 1946837 - 1946810 - T 82 -7.7 -4.45083 | opp_overlap 1946810 1946811, overlap 1946811 GCTATATCTACAAAA CGAACCACGCC GATTAA GACGTGGTTCC ATTTTTTTAATAATT TERM 1974 1946811 - 1946836 + T 72 -9 -2.94304 | opp_overlap 1946810 1946811, overlap 1946810 CTATATCTACAAAAC GAACCACGCC GATTAA GACGTGGTTC CATTTTTTTAATAAT TERM 1975 1946836 - 1946811 - T 93 -11.2 -3.26568 | opp_overlap 1946811 1946810, overlap 1946810 CTATATCTACAAAAC GAACCACGCC GATTAA GACGTGGTTC CATTTTTTTAATAAT lukD 1948023 - 1947040 - | leukotoxin F-subunit lukE 1948960 - 1948025 - | leukotoxin S-subunit TERM 1976 1949615 - 1949636 + H 82 -6.1 -5.2853 | opp_overlap 1949631, overlap 1949631 GCATGGTCGTTGACT TATTTATAT TATA ATATAAATA TTTTATTTTTCAATA SAV1821 1950324 - 1951112 + | hypothetical protein SAV1822 1951946 - 1952440 + | hypothetical protein TERM 1977 1952460 - 1952476 + F 82 -8 -4.48073 | AAACTAAATAATTTC GGGTAG CCCCC CTACCC TTATTATTTTTTTGC SAV1823 1952775 - 1953551 + | hypothetical protein TERM 1978 1953637 - 1953597 - T 75 -9.2 -3.01269 | opp_overlap 1953598, overlap 1953592 1953613 AATTTCCAAACCATA TCGTGCAAATAGAAAAGC AGATA ACTTTTTTATTTGCACGT TTTATTTTAGAACAA TERM 1979 1953598 - 1953636 + T 100 -14.2 -5.07652 | opp_overlap 1953597 1953592 1953613 ATTTCCAAACCATAT CGTGCAAATAGAAAAG CAGATAA CTTTTTTATTTGCACG TTTTATTTTAGAACA seg 1954879 - 1954103 - | extracellular enterotoxin type G precursor sen 1955938 - 1955162 - | enterotoxin yent2 1956366 - 1955956 - | enterotoxin yent1 1956727 - 1956326 - | enterotoxin sei 1957609 - 1956881 - | extracellular enterotoxin type I precursor sem 1958363 - 1957644 - | enterotoxin TERM 1980 1957788 - 1957776 - G 80 -6.3 -4.80959 | overlap 1957786 TAAGTCATAAGAAAA TGATG AAC CATCA TTCAAATGAAATAAT seo 1959426 - 1958644 - | enterotoxin TERM 1981 1959645 - 1959592 - R 82 -5.4 -5.48787 | overlap 1959601 ATAATAGACAAAAAA CCTTAAAAATAGCGCTTAAAATGG GTAAAA CCATTTTAAGCGCTATAACGGAGA GTGAGGGATTCGAAC TERM 1982 1959636 - 1959601 - R 100 -17.9 -4.77925 | overlap 1959592 AAAAAACCTTAAAAA TAGCGCTTAAAATGG GTAAAA CCATTTTAAGCGCTA TAACGGAGAGTGAGG TERM 1983 1959776 - 1959755 - R 100 -9.5 -5.8187 | opp_overlap 1959755 TATGTAATAAAAAAA CAGAAGCGA TATT TCACTTCTG TTTGTATGACTCCTA TERM 1984 1959755 - 1959776 + r 75 -7.3 -4.07124 | opp_overlap 1959755 TATGTAATAAAAAAA CAGAAGCGA TATT TCACTTCTG TTTGTATGACTCCTA TERM 1985 1959862 - 1959849 - R 70 -8.1 -3.14881 | TAACCGCTTGACCAA GGAGC CATG GCTCC ACAGGTAGGACTCGA TERM 1986 1959978 - 1959998 + r 70 -6.1 -4.19506 | opp_overlap 1959978 1959980 GAATCGAACCCACAA CATCAGCTT GGA AGGCTGAGG TTTTGCCATTAAACT TERM 1987 1960693 - 1960659 - R 100 -10.2 -4.7078 | TGAACTATTGAAAAA GATGTAGGAATCATAA ATT TTATAATGCCTACACC TCTAAACTATTAAAA SAV1831 1961342 - 1960788 - | hypothetical protein TERM 1988 1961420 - 1961473 + r 73 -8.5 -3.49924 | opp_overlap 1961422, overlap 1961422 TAATTGTAAAATAAA AACACCTTAATTAGAAATGTTATAT CGCA AAGTGACATTTCTAATTAAAGTGTA TTGTCATCATTTCAA TERM 1989 1961471 - 1961422 - R 100 -9 -5.46706 | opp_overlap 1961420 1961422 ATTGTAAAATAAAAA CACCTTAATTAGAAATGTTA TATCGCAAAG TGACATTTCTAATTAAAGTG TATTGTCATCATTTC TERM 1990 1961422 - 1961471 + r 87 -11.1 -3.31802 | opp_overlap 1961422, overlap 1961420 ATTGTAAAATAAAAA CACCTTAATTAGAAATGTTATAT CGCA AAGTGACATTTCTAATTAAAGTG TATTGTCATCATTTC hemY 1963065 - 1961665 - | protoporphyrinogen oxidase hemH 1964012 - 1963089 - | ferrochelatase hemE 1965107 - 1964070 - | uroporphyrinogen decarboxylase TERM 1991 1965202 - 1965179 - H 72 -6.9 -4.16842 | opp_overlap 1965183, overlap 1965183 CGTATTTTCAATAAA TAAATGTCA TAAAAC TGACATTTA ATCATAGAACTATTT traP 1965370 - 1965873 + | signal transduction protein SAV1836 1967220 - 1965997 - | ABC transporter SAV1837 1967953 - 1967213 - | ABC transporter hit 1968087 - 1968509 + | Hit-like protein involved in cell-cycle regulation SAV1839 1968651 - 1969016 + | hypothetical protein TERM 1992 1969093 - 1969129 + F 81 -5.5 -5.28176 | gap 2, opp_overlap 1969092 1969093 AAATGCCAAATAAAC GAGATGACATTAGAAAT TAGAT ATTTCT--TGTCATCTC TTTTTTATAACTCAA SAV1840 1969751 - 1970308 + | hypothetical protein prsA 1970513 - 1971475 + | peptidyl-prolyl cis/trans isomerase TERM 1993 1971528 - 1971478 - T 100 -20.6 -3.42702 | opp_overlap 1971483, overlap 1971483 CATGAGCCAATAACA CAAAACCGAGCGACCGTGGTTCAA AAA TCATACCACGGCCGCTCGGTTTTT TCGCATTAAAAATCG TERM 1994 1971523 - 1971483 - T 100 -20.5 -4.79752 | opp_overlap 1971483, overlap 1971478 GCCAATAACACAAAA CCGAGCGACCGTGGTTCAA AAA TCATACCACGGCCGCTCGG TTTTTTCGCATTAAA TERM 1995 1971483 - 1971523 + T 100 -15.5 -5.09426 | opp_overlap 1971483 1971478 GCCAATAACACAAAA CCGAGCGACCGTGGT TCAAAAATCAT ACCACGGCCGCTCGG TTTTTTCGCATTAAA TERM 1996 1971582 - 1971541 - T 87 -8.1 -4.72272 | gap 1, opp_overlap 1971541 TTTTCGCATTAAAAA TCGGACAGAGGAGCTCA-TG TTT CAGTATACTCATCTGTCCGA TATCTTTTAATTCTT cbf1 1972537 - 1971596 - | 3'-5' exoribonuclease YhaM TERM 1997 1971659 - 1971672 + g 89 -6.7 -5.61596 | opp_overlap 1971659 TATTTTATCTGTAAA CTGAC CCTT GTCAG TTTTTTTATAAGCCT TERM 1998 1972458 - 1972474 + g 70 -7.3 -3.89346 | TCTTTACCTTGTGCT GTTACAC CCT GTGTAGC TTTATGCACTAAGAA SAV1843 1975470 - 1972534 - | hypothetical protein TERM 1999 1974078 - 1974090 + g 72 -4.9 -4.7657 | opp_overlap 1974078 TTAAAAGAATAAACG TTGTT CGT AACAA TTTTTGACGTTTTTG SAV1844 1976656 - 1975460 - | phosphoesterase TERM 2000 1976995 - 1977011 + r 75 -9.5 -2.93073 | TTCAAAAATTTCAGT CGGAAAT GCA ATTTCCG TAATTGTTAACACCG TERM 2001 1977289 - 1977257 - R 85 -7.1 -4.87318 | opp_overlap 1977257 1977256 TTCAAAATGCAAAAA GGAAGTTAGGACA CGTTTAC TAGCCTAACTTCC GTTACTGAATGCATC TERM 2002 1977541 - 1977511 - R 100 -11.2 -5.79588 | opp_overlap 1977509 1977511 TCAAAACTAAAAAAA CTACCCACAAAGTC TCG GACTCTGTCGGCAG TCTATTCCTCTATTT SAV1845 1977928 - 1977584 - | hypothetical protein TERM 2003 1977680 - 1977691 + g 70 -4.4 -4.77896 | ATTCATTAATGCAGA GATG TTTT CATC TTTTTCAATTGCTTG SAV1846 1979121 - 1977997 - | hypothetical protein SAV1847 1979764 - 1979300 - | hypothetical protein SAV1848 1980743 - 1980120 - | two-component response regulator-like protein SAV1849 1981877 - 1980765 - | two-component sensor histidine kinase-like protein SAV1850 1982040 - 1982861 + | hypothetical protein TERM 2004 1983051 - 1983061 + T 70 -5.4 -4.63184 | opp_overlap 1983051 ACATCCTTGGATAAT GACT TGT AGTC TTTTTCAACTGCGTT TERM 2005 1983295 - 1983264 - T 85 -6 -5.4492 | GACATAGACAAAAAA TAAAGCTTGAACAC TATA ATGCCCAAACTTTA TTTTATATTAATATT fumC 1984699 - 1983314 - | fumarate hydratase TERM 2006 1983752 - 1983764 + g 71 -6.3 -4.09685 | opp_overlap 1983752 ACCAGGCATAATTGA TGAAC CTG GTTCA TTTTCAGGGATGGAA SAV1852 1985290 - 1984895 - | hypothetical protein TERM 2007 1985743 - 1985719 - R 100 -10.1 -5.64304 | opp_overlap 1985719 GAATATAATAAAAAA GCTAGGTAACA AAA TGCTACCTAAC TTCATATTCAAGATA SAV1853 1985990 - 1985838 - | hypothetical protein SAV1854 1986614 - 1986015 - | hypothetical protein TERM 2008 1986448 - 1986459 + g 74 -3 -5.38326 | opp_overlap 1986448 CTAAAATCAACAGCA TGTT TTTC AACA TTTTTCTTTAATTCA SAV1855 1987243 - 1986773 - | putative rRNA methylase SAV1856 1988375 - 1987248 - | iron-sulfur cluster-binding protein TERM 2009 1987402 - 1987412 + g 79 -5.4 -5.1925 | ATCGGTCTTTCATCT GTTG TTG CAAC TTTTTTCAATTCTGG TERM 2010 1988513 - 1988467 - R 82 -6.2 -5.29445 | gap 1, opp_overlap 1988467 TTTTAATAATAAAAA GCTTGAATATATGATATA-AC TTTGTG GTGCGCATCATATATTCAAGC TTCGTTAGGTTGTTA SAV1857 1989254 - 1988526 - | glutamate ABC transporter ATP-binding protein SAV1858 1990566 - 1989241 - | glutamine-binding periplasmic protein TERM 2011 1990054 - 1990066 + g 84 -6.3 -5.11836 | opp_overlap 1990054 1990053 TTTCACATTGGAAAT TCCTA ATT TAGGA TTTTGTTTTAAATAT TERM 2012 1990876 - 1990908 + r 82 -10.7 -2.61656 | opp_overlap 1990876, overlap 1990875 1990873 1990871 AAATCAATCAAAAAA GCGCTACTATCAATA TCT TATTGACAGTAACGC CTATATTTATCATAT TERM 2013 1990908 - 1990876 - R 100 -15.1 -5.33921 | opp_overlap 1990875 1990873 1990871 1990876 AAATCAATCAAAAAA GCGCTACTATCAATA TCT TATTGACAGTAACGC CTATATTTATCATAT SAV1859 1992017 - 1990956 - | regulatory protein TERM 2014 1992410 - 1992380 - H 95 -7.8 -5.63374 | GTAATACCAAAAAAA GAAGTTAAACAA TGCATAG TTGCTTAACTTC CAATATTGAACTCAT TERM 2015 1992500 - 1992521 + H 82 -4.4 -5.52384 | overlap 1992503 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 2016 1993917 - 1993887 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 1992601 - 1993920 + | transposase TERM 2017 1993984 - 1993995 + T 79 -5.8 -5.11389 | opp_overlap 1993971, overlap 1993982 TACCCACCACATTTG GTGG AGAA CCAC TTTTATTTGTATTGT TERM 2018 1994050 - 1994028 - T 100 -13.6 -5.4433 | opp_overlap 1994032 AGAGAGAAATAAAAA GAAACCTTGT TTT ACAAGGTTTC TAATAGGTTATGTTA TERM 2019 1994032 - 1994046 + T 82 -8.6 -3.99806 | opp_overlap 1994028 AGAAATAAAAAGAAA CCTTGT TTT ACAAGG TTTCTAATAGGTTAT TERM 2020 1994200 - 1994187 - T 90 -6.7 -5.64421 | ATGGTAAACAAAAAA CTTCC CTTT GGAAG CAATTATGGAGCGGA TERM 2021 1996151 - 1996167 + T 78 -9.5 -3.22475 | overlap 1996154 TCGAACCCGCGACCC CAACCTT GGC AAGGTTG TATTCTACCGCTGAA TERM 2022 1999356 - 1999375 + T 90 -10.8 -3.66803 | opp_overlap 1999355 1999354 GAGTGTCCTACAACC CCAACAAG CAAG CTTGTTGG TTTGGGCTCTTCCCG TERM 2023 1999732 - 1999759 + T 70 -5.6 -4.28115 | AACGCGTTATTAATC TTGTGAGTGTTC TTTC GAACACTAGCGA TTATTTCTTATGAAT TERM 2024 2001042 - 2001060 + T 71 -8.8 -2.75963 | overlap 2001041 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT TERM 2025 2001473 - 2001494 + T 83 -10.3 -3.25079 | overlap 2001471 AAGACCGTCTTTCAC TTTTGAACC ATGC GGTTCAAAA TATTATCCGGTATTA TERM 2026 2001719 - 2001735 + T 73 -5.9 -4.66833 | overlap 2001720 ATACTAAATAATGTT TGTAACT TAT AGTTACG TTTTTGGAATTAACG TERM 2027 2002081 - 2002050 - T 71 -4.6 -4.69326 | opp_overlap 2002059 AGAGTCAACATAAAA CAACACTTATTTTT GTTT AAAAATTACTGTTG AAGGGATTATTTTCT TERM 2028 2002123 - 2002138 + T 70 -4 -4.90917 | CTATATGTATTTAAA GTGTAA TTCC TTACGC TTTTTACTTCAGTTT TERM 2029 2002349 - 2002318 - T 100 -11.1 -5.4111 | opp_overlap 2002318 2002321 2002341 AATAAGCATAAAAAA GAAGTTAAACAAC TTTCAT GTCGTTTAACTTC TTAAATATTACACTT TERM 2030 2002318 - 2002349 + T 73 -8.9 -3.19293 | opp_overlap 2002318, overlap 2002321 2002341 AATAAGCATAAAAAA GAAGTTAAACAAC TTTCAT GTCGTTTAACTTC TTAAATATTACACTT SAV1861 2002865 - 2002419 - | FUR family transcriptional regulator SAV1862 2003912 - 2002962 - | D-3-phosphoglycerate dehydrogenase SAV1863 2004373 - 2003918 - | bacterioferritin comigratory protein gsaB 2004454 - 2005743 + | glutamate-1-semialdehyde aminotransferase TERM 2031 2005814 - 2005828 + F 71 -7.2 -3.80189 | opp_overlap 2005823, overlap 2005823 AGATTCATTTTATAT CGTTAA CTA TTAACG TTTAACTTGATATGT TERM 2032 2006514 - 2006525 + G 71 -3 -5.06585 | opp_overlap 2006514, overlap 2006508 ATAATTCATTAAATA TATC CTCA GATA TTTTTATGTGGTTTA SAV1865 2006036 - 2007130 + | hypothetical protein TERM 2033 2007198 - 2007250 + T 73 -8.9 -3.21276 | gap 1, opp_overlap 2007197 2007205, overlap 2007205 TCTCGAAATTAAATT TAAAAAAGCAGTAAGATTATTTTC AATGAA GAAAATC-TCTTACTGCTTTTCTA TGTTATGACCCCACC TERM 2034 2007205 - 2007243 + T 80 -7 -4.71223 | gap 1, opp_overlap 2007197 2007205, overlap 2007198 ATTAAATTTAAAAAA GCAGTAAGATTATTTTC AATGAA GAAAATC-TCTTACTGC TTTTCTATGTTATGA TERM 2035 2007243 - 2007205 - T 84 -7 -5.22943 | gap 1, opp_overlap 2007205 2007198, overlap 2007197 ATTAAATTTAAAAAA GCAGTAAGATTATTTTC AATGAA GAAAATC-TCTTACTGC TTTTCTATGTTATGA SAV1866 2009056 - 2007320 - | ABC transporter TERM 2036 2008901 - 2008884 - G 70 -7.1 -3.76641 | opp_overlap 2008883 ATGGCAATAGTTAAA TGATGAA CTTT TTCATCA GTCGTTAGTGCGTGG SAV1867 2009889 - 2009347 - | hypothetical protein SAV1868 2011229 - 2010192 - | A/G-specific adenine glycosylase SAV1869 2011381 - 2012358 + | hypothetical protein TERM 2037 2012451 - 2012397 - T 100 -10.2 -5.31456 | opp_overlap 2012404, overlap 2012404 TTAATCTATAAAAAA TGAACAACCGGGCAGAATGAAAATCA AAA CGATTTTTACTCTGTCCGGTTTTTTA ATGTAAAACTATGAA TERM 2038 2012444 - 2012404 - T 100 -12.7 -4.08846 | opp_overlap 2012404, overlap 2012397 ATAAAAAATGAACAA CCGGGCAGAATGAAAATCA AAA CGATTTTTACTCTGTCCGG TTTTTTAATGTAAAA TERM 2039 2012404 - 2012444 + T 100 -14.2 -5.21709 | opp_overlap 2012397 2012404 ATAAAAAATGAACAA CCGGGCAGAATGAAAATC AAAAC GATTTTTACTCTGTCCGG TTTTTTAATGTAAAA SAV1870 2013455 - 2012619 - | hypothetical protein SAV1871 2014981 - 2013464 - | teichoic acid translocation ATP-binding protein SAV1872 2015310 - 2014996 - | hypothetical protein recX 2016106 - 2015288 - | recombination regulator RecX TERM 2040 2015426 - 2015436 + g 72 -2.6 -5.29782 | GTACTTCTTTCGATT TTTA TTA TAAA TTTTTTCTAAATCTC TERM 2041 2016249 - 2016218 - R 100 -9.6 -5.46657 | opp_overlap 2016230 GATGCTAACAAAAAA TCACACTATCATCT TTTA AAATGAAAGTGTGA TTACAAGCAAATCTG SAV1874 2017175 - 2016366 - | glycosyltransferase TERM 2042 2017428 - 2017386 - R 88 -9.4 -4.10657 | overlap 2017391 TTATATTTTGTAAAA TAAAAGACCATCCCTATTAA ATG CCAATAGAGACGACCTTTTA TTTGTTATTCATTTA TERM 2043 2017423 - 2017391 - R 75 -4.9 -5.07652 | overlap 2017386 TTTTGTAAAATAAAA GACCATCCCTATTAA ATG CCAATAGAGACGACC TTTTATTTGTTATTC SAV1875 2018030 - 2017515 - | hypothetical protein SAV1876 2018322 - 2018161 - | hypothetical protein SAV1877 2018546 - 2019697 + | hypothetical protein SAV1878 2020487 - 2019957 - | hypothetical protein ampS 2021824 - 2020577 - | aminopeptidase ampS SAV1880 2022042 - 2021836 - | hypothetical protein SAV1881 2022183 - 2022647 + | protein-tyrosine phosphatase SAV1882 2022654 - 2022929 + | hypothetical protein TERM 2044 2024282 - 2024271 - g 74 -3 -5.34365 | overlap 2024262 TGACAATAATAAAAA TCAT TATA ATGA GAACACTAGATACGA SAV1883 2023207 - 2024424 + | transporter TERM 2045 2024424 - 2024482 + T 100 -19.3 -3.57873 | gap 1, opp_overlap 2024426 2024437, overlap 2024426 2024437 GCTTAAAAAAGACTA AACACCAACAAAACAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTGTTTT-TTGGTGTC TATTTGATGTTATAT TERM 2046 2024480 - 2024426 - T 100 -19.7 -4.18668 | gap 1, opp_overlap 2024426 2024424 2024437, overlap 2024437 TTAAAAAAGACTAAA CACCAACAAAACAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTGTTTT-TTGGTG TCTATTTGATGTTAT TERM 2047 2024426 - 2024480 + T 100 -21.9 -3.35191 | gap 1, opp_overlap 2024426 2024437, overlap 2024424 2024437 TTAAAAAAGACTAAA CACCAACAAAACAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTGTTTT-TTGGTG TCTATTTGATGTTAT TERM 2048 2024470 - 2024437 - T 100 -12.5 -4.81163 | opp_overlap 2024426 2024424 2024437, overlap 2024426 TAAACACCAACAAAA CAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTG TTTTTTGGTGTCTAT TERM 2049 2024437 - 2024470 + T 100 -14.7 -5.25893 | opp_overlap 2024437 2024426, overlap 2024426 2024424 TAAACACCAACAAAA CAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTG TTTTTTGGTGTCTAT vraR 2025166 - 2024537 - | two-component response regulator vraS 2026199 - 2025156 - | two-component sensor histidine kinase SAV1886 2026897 - 2026196 - | hypothetical protein TERM 2050 2026837 - 2026802 - G 72 -4.8 -4.8269 | opp_overlap 2026807 TAGAACGAGTAAAAA GCCAATTTTTTCAAAA AATA TGTAGTAAAAATTGGC AATAATCATTAATGC SAV1887 2027298 - 2026912 - | hypothetical protein TERM 2051 2027478 - 2027443 - R 100 -9.8 -4.51097 | overlap 2027445 TTAATTATTATAAAA CAGTTCCGAAACCAAT ATGA ATAGGCTCCGGAACTA AATGATGTTCATACT TERM 2052 2027476 - 2027445 - R 89 -10.2 -3.85857 | overlap 2027443 AATTATTATAAAACA GTTCCGAAACCAAT ATGA ATAGGCTCCGGAAC TAAATGATGTTCATA map 2028273 - 2027515 - | methionine aminopeptidase TERM 2053 2028380 - 2028404 + H 70 -8.8 -2.57463 | overlap 2028379 AGTGAGACATAGTGT GATAAAGAAA AAATA TTTCTTTATC GTTGTACCCCAACTT TERM 2054 2028490 - 2028506 + H 72 -8 -3.68024 | TGCACATTATCGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 2055 2028549 - 2028565 + H 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 2056 2028854 - 2028864 + G 77 -3.2 -5.41143 | CAGAACAATTAAAAC TGGT ATT GCCA TTTTTTTAACAGCTG SAV1889 2028804 - 2029790 + | hypothetical protein TERM 2057 2029946 - 2029969 + T 72 -6.8 -4.15222 | opp_overlap 2029952, overlap 2029948 2029952 AACTTGCATTGTCTG TAGAAATTGG GAAT CCAATTTCTC TTTGTTGGGGCCCCT TERM 2058 2029948 - 2029967 + T 81 -9.4 -3.6761 | opp_overlap 2029952, overlap 2029946 2029952 CTTGCATTGTCTGTA GAAATTGG GAAT CCAATTTC TCTTTGTTGGGGCCC TERM 2059 2030014 - 2030002 - T 90 -7.7 -5.1925 | opp_overlap 2030001 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SAV1890 2030673 - 2030221 - | hypothetical protein TERM 2060 2030743 - 2030786 + r 71 -6.8 -3.96531 | opp_overlap 2030745, overlap 2030745 TCACTAGAACAAAAA AACACACATCAATTTGGTTG TTTC CATCCAAAATAATGTGTGTG TTTATACATATATGA TERM 2061 2030745 - 2030784 + r 81 -9.4 -3.5697 | opp_overlap 2030745, overlap 2030743 ACTAGAACAAAAAAA CACACATCAATTTGGTTG TTTC CATCCAAAATAATGTGTG TGTTTATACATATAT TERM 2062 2030784 - 2030745 - R 100 -11.6 -5.89921 | opp_overlap 2030745 2030743 ACTAGAACAAAAAAA CACACATCAATTTGGTTG TTTC CATCCAAAATAATGTGTG TGTTTATACATATAT SAV1891 2031590 - 2030859 - | cobyric acid synthase CobQ SAV1892 2032905 - 2031592 - | UDP-N-acetylmuramyl tripeptide synthetase-like TERM 2063 2031754 - 2031771 + g 70 -7.1 -3.86266 | TTCAACCTCTGCTAA CTTCAAT CGCA ATTGAAG TTCTTCTGCTCGTGT SAV1893 2033197 - 2033697 + | ferritin TERM 2064 2033792 - 2033831 + F 85 -5.9 -5.46698 | gap 1, opp_overlap 2033806 TATTATTTTGCTTTA CGGAGATCACTAGATTCA TTTTC TGAATC-ATTGATCTGCG TTTTTTCATTTTCAA SAV1894 2034087 - 2034641 + | DNA polymerase III, alpha chain PolC-type SAV1895 2035779 - 2034709 - | DNA polymerase IV TERM 2065 2035037 - 2035050 + g 74 -5.3 -4.78753 | GTTGCAAATGTGCGT TCAGT CCCT ACTGA TTTTCTTACTCTTGA SAV1896 2036556 - 2036026 - | hypothetical protein SAV1897 2038087 - 2036726 - | RNA methyltransferase-like protein SAV1898 2039115 - 2038168 - | putative lipid kinase TERM 2066 2039300 - 2039316 + r 72 -8 -3.68024 | opp_overlap 2039294 TGCACATTATTGTAA GCTGAC AGAAA GTCAGC TTCTATGTTGGGGCC TERM 2067 2039356 - 2039372 + r 72 -8 -3.68024 | opp_overlap 2039350 TGCACATTATTGTAA GCTGAC AGAAA GTCAGC TTCTATGTTGGGGCC TERM 2068 2039418 - 2039406 - R 90 -7.7 -5.1925 | opp_overlap 2039405 2039399 2039406 CTAGAATTGAAAAAA GCTTG TTA CAAGC GTATTTTCTTTCAGT TERM 2069 2039850 - 2039811 - R 100 -11.7 -4.17296 | opp_overlap 2039811, overlap 2039815 TTCTATAGATATAAA TAAACCCTCGATTGC ATCTAAGTCA GCAATCAAGGGTTTA TTTTTTAAATCTTCA TERM 2070 2039811 - 2039850 + r 100 -9.5 -5.1615 | opp_overlap 2039811 2039815 TTCTATAGATATAAA TAAACCCTCGATTGC ATCTAAGTCA GCAATCAAGGGTTTA TTTTTTAAATCTTCA TERM 2071 2039846 - 2039815 - R 85 -8.1 -4.66625 | opp_overlap 2039811, overlap 2039811 ATAGATATAAATAAA CCCTCGATTGC ATCTAAGTCA GCAATCAAGGG TTTATTTTTTAAATC TERM 2072 2039854 - 2039882 + r 70 -6.2 -4.05861 | overlap 2039872 ATCAAGGGTTTATTT TTTAAATCTTCA TAGTT TGATGATTTAAA TTATCTTTTATCTAA gatB 2041310 - 2039883 - | aspartyl/glutamyl-tRNA amidotransferase subunit B SAV1900 2042780 - 2041323 - | glutamyl-tRNAGln amidotransferase subunit A TERM 2073 2042710 - 2042722 + g 86 -2.7 -5.9362 | ATATCTTTAACAACA TCAGA TGG TTTGA TTTTTTTGTCTTTTA gatC 2043084 - 2042782 - | aspartyl/glutamyl-tRNA amidotransferase subunit C putP 2043451 - 2044989 + | high affinity proline permease TERM 2074 2045015 - 2045054 + T 100 -11.7 -5.33331 | opp_overlap 2045015 TTAACAAATTAAAAA GGTACTAATGTTAATCA AAATTA TGACTAACATTGGTACC TTTTTATTATCTTTA TERM 2075 2045054 - 2045015 - T 100 -11.7 -5.09521 | opp_overlap 2045015 TTAACAAATTAAAAA GGTACTAATGTTAATCA AAATTA TGACTAACATTGGTACC TTTTTATTATCTTTA SAV1903 2046277 - 2045078 - | sex pheromone staph-cAM373 precursor dnlJ 2048293 - 2046290 - | DNA ligase TERM 2076 2047055 - 2047041 - G 73 -8.6 -3.20723 | TTTGGATTAATGCAA CGAAGT GCT ACTTCG CCTTCAATACGTACT TERM 2077 2048066 - 2048077 + g 73 -4.4 -5.00616 | ACTTAACATTGGCGT GTCA TGGT TGAC TTTTTTGAAAGAGGC pcrA 2050489 - 2048297 - | ATP-depentend DNA helicase pcrB 2051178 - 2050486 - | geranylgeranylglyceryl phosphate synthase-like protein TERM 2078 2051265 - 2051277 + r 75 -4.9 -5.14563 | TGAATTTTAAGTTCT TTTAC TCT GTAAA TTTTTTCGTGAAAAA TERM 2079 2051334 - 2051294 - R 93 -8.6 -5.00616 | opp_overlap 2051294 2051320, overlap 2051324 TTTTTCGTGAAAAAA CAATGATTATCTACCT TATTAGTGC AGATAGATAACCATTG TTTATCGTTCATTTA SAV1907 2051652 - 2051350 - | hypothetical protein TERM 2080 2051714 - 2051749 + r 85 -7.8 -4.69048 | TTAATCTATTAAAGT GTAGCGATTTATATTT TATT AAATCTGAATCGTTAC TTTATTTAATTTTAT purB 2053056 - 2051761 - | adenylosuccinate lyase TERM 2081 2052081 - 2052059 - G 70 -7 -3.78962 | TCAAATACAGTTAAA CGGTCCACAA TAT TTGTGAAACG ATTCAATGCATAATC TERM 2082 2054596 - 2054582 - g 70 -4.3 -4.68132 | CAATATATAAATAAA CTTGA GAATT TCAAG ATAAGAGAAACTCAA TERM 2083 2054921 - 2054899 - g 72 -6.2 -4.37199 | AGTAGAATCAAGAAA TGGTATGCAC GCA GGGCATGCCA TGGCAGTTGTTGGGA SAV1909 2053916 - 2055082 + | staphopain SAV1910 2055113 - 2055439 + | hypothetical protein TERM 2084 2055608 - 2055575 - T 79 -8.3 -3.89411 | gap 2, opp_overlap 2055575, overlap 2055566 TTAAAATATTAAGAA CCCCCAGCATATGCT TTATAT AGC-T-TGCTGGGGG TTTCTCATACAATAT TERM 2085 2055575 - 2055608 + T 79 -8.3 -3.97388 | gap 2, opp_overlap 2055575 2055566 TTAAAATATTAAGAA CCCCCAGCATATGCT TTATAT AGC-T-TGCTGGGGG TTTCTCATACAATAT TERM 2086 2055694 - 2055653 - T 78 -6.7 -4.57482 | opp_overlap 2055655 2055682, overlap 2055655 2055682 GCATGTATAAACAAA TAGGCTATTCAAAGTAAAA TTAC TCAAACTTTGAATAGCCTT TCCTCTTCAAATAGT TERM 2087 2055692 - 2055655 - T 86 -9.3 -3.89305 | opp_overlap 2055655 2055682, overlap 2055653 2055682 ATGTATAAACAAATA GGCTATTCAAAGTAAAA TTAC TCAAACTTTGAATAGCC TTTCCTCTTCAAATA TERM 2088 2055655 - 2055692 + T 82 -8.7 -3.93038 | opp_overlap 2055653 2055655 2055682, overlap 2055682 ATGTATAAACAAATA GGCTATTCAAAGT AAAATTACTCAA ACTTTGAATAGCC TTTCCTCTTCAAATA SAV1911 2056487 - 2055885 - | hypothetical protein nadE 2057579 - 2056758 - | NAD synthetase TERM 2089 2057005 - 2057015 + g 71 -6.8 -4.15044 | opp_overlap 2057005, overlap 2057003 TACGCTAATAATTGA CGAC CTT GTCG TTTATTCAAACCAAA SAV1913 2059041 - 2057572 - | nicotinate phosphoribosyltransferase SAV1914 2059225 - 2060301 + | nitric-oxide synthase-like protein TERM 2090 2060871 - 2060881 + G 77 -5.4 -4.8622 | TTGATCAAAATGCGA CATC ATT GATG TTTTTAATTACACCA SAV1915 2060321 - 2061115 + | chorismate mutase TERM 2091 2061152 - 2061199 + T 76 -5 -5.11389 | opp_overlap 2061154 2061156, overlap 2061156 AATTTAAATAAAATA AAGAGTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGACTTTC TTTTGTTTGTATTGT TERM 2092 2061197 - 2061154 - T 88 -7.6 -4.96996 | opp_overlap 2061152 2061156, overlap 2061156 TTTAAATAAAATAAA GAGTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGACTT TCTTTTGTTTGTATT TERM 2093 2061195 - 2061156 - T 95 -10.2 -4.08474 | opp_overlap 2061156 2061152, overlap 2061154 TAAATAAAATAAAGA GTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGAC TTTCTTTTGTTTGTA TERM 2094 2061156 - 2061195 + T 88 -8 -5.00611 | opp_overlap 2061154 2061156, overlap 2061152 TAAATAAAATAAAGA GTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGAC TTTCTTTTGTTTGTA SAV1916 2062867 - 2061305 - | sodium-dependent transporter SAV1917 2064169 - 2063072 - | hypothetical protein SAV1918 2064538 - 2065098 + | pyrazinamidase/nicotinamidase-like protein SAV1919 2065151 - 2066080 + | putative manganese-dependent inorganic pyrophosphatase TERM 2095 2066124 - 2066164 + F 95 -7.3 -5.67283 | opp_overlap 2066124 GTTGTATTTAACTAA CAGTTCATT-AAAGTAGAA TTTAT TTC-ACTTTCAATGAACTG TTTTTTATTTACGTT aldH 2066498 - 2067877 + | aldehyde dehydrogenase TERM 2096 2067896 - 2067874 - T 70 -5 -4.56775 | opp_overlap 2067867, overlap 2067878 AGCTTTCTTTAAAAA TTAATTTTTG AGA CAAAAATAAA CCATGCTTCCATAAT SAV1921 2069025 - 2067997 - | hypothetical protein TERM 2097 2068803 - 2068787 - G 71 -6.7 -4.1891 | GCTTTTGAAGACAAA CATTTAT TTA ATAAATG CAATTCACCATTGTC SAV1922 2069295 - 2069696 + | hypothetical protein SAV1923 2069884 - 2069711 - | putative transposase TERM 2098 2070239 - 2070184 - R 100 -13.1 -3.91032 | gap 1, opp_overlap 2070191, overlap 2070191 GAAGTATTGTATAAA TAGAGAACAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTGTTTTTTA GGGATTTATGTCCCA TERM 2099 2070232 - 2070191 - R 100 -15.6 -3.80279 | gap 1, opp_overlap 2070191, overlap 2070184 TGTATAAATAGAGAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTG TTTTTTAGGGATTTA TERM 2100 2070191 - 2070232 + r 100 -15.6 -5.07107 | gap 1, opp_overlap 2070191 2070184 TGTATAAATAGAGAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTG TTTTTTAGGGATTTA SAV1924 2070442 - 2070269 - | hypothetical protein TERM 2101 2071026 - 2071016 - g 85 -6.8 -5.23016 | opp_overlap 2071016 AAAGAATGGAAAAAA CGTG TCC CACG TTTCGATATAGATGT SAV1925 2070893 - 2071933 + | hypothetical protein TERM 2102 2071979 - 2071935 - T 85 -8.3 -4.67607 | opp_overlap 2071937 2071940 2071972, overlap 2071938 TTGCCAACAAATAAA TAA-CACCGATATTAGAGAAA TTATG CTTC-CTAATATCGGTGCTTA CATCCTTTATTTATT TERM 2103 2071975 - 2071938 - T 100 -11.6 -4.43668 | gap 1, opp_overlap 2071937 2071940 2071972, overlap 2071935 CCAACAAATAAATAA CACCGATATTAGAGAAA TTATG CTTC-CTAATATCGGTG CTTACATCCTTTATT SAV1926 2072832 - 2071990 - | hypothetical protein TERM 2104 2072058 - 2072069 + g 74 -3 -5.2853 | overlap 2072053 2072064 TTTTCCCAACTTTAC CATT AGTA AATG TTTTATTTTTAACTA TERM 2105 2072168 - 2072187 + g 74 -6.4 -4.28018 | ATATCTCCTTGTTTA GTAGAAGC TTTT GCATCTAC TTTTGATGGCATGTT SAV1927 2073386 - 2072829 - | hypothetical protein SAV1928 2073970 - 2073446 - | hypothetical protein SAV1929 2074091 - 2074654 + | hypothetical protein TERM 2106 2074669 - 2074713 + T 100 -8.8 -5.12068 | opp_overlap 2074672 2074673, overlap 2074672 2074673 AATTTACAATAAGAC AAACTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAATTA TTTTTATTAAATGTC TERM 2107 2074672 - 2074710 + T 100 -10.5 -4.64495 | opp_overlap 2074672 2074673, overlap 2074669 2074673 TTACAATAAGACAAA CTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAA TTATTTTTATTAAAT TERM 2108 2074710 - 2074672 - T 100 -12.7 -4.37544 | opp_overlap 2074669 2074672 2074673, overlap 2074673 TTACAATAAGACAAA CTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAA TTATTTTTATTAAAT TERM 2109 2074673 - 2074709 + T 100 -14 -3.3707 | opp_overlap 2074672 2074673, overlap 2074672 2074669 TACAATAAGACAAAC TTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAA ATTATTTTTATTAAA TERM 2110 2074709 - 2074673 - T 100 -14 -3.21442 | opp_overlap 2074673 2074672 2074669, overlap 2074672 TACAATAAGACAAAC TTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAA ATTATTTTTATTAAA SAV1930 2075460 - 2074720 - | hypothetical protein SAV1931 2076332 - 2075460 - | ABC transporter ATP-binding protein TERM 2111 2075803 - 2075828 + g 71 -7.7 -3.56704 | opp_overlap 2075800, overlap 2075800 TCTTCTAACTTATGA CTTGATATTAG AATT CTCATATCAAG TTCATTTACTAAAGA SAV1932 2077009 - 2076329 - | hypothetical protein TERM 2112 2077025 - 2077037 + r 74 -6.3 -4.37067 | TTAAAAACCTTCTTC CATCA ATT TGATG TTTTCATGATATTTA SAV1933 2077906 - 2077010 - | ABC transporter ATP-binding protein TERM 2113 2077502 - 2077524 + g 74 -3.4 -5.25906 | TGCTAGTGATAATTT CATTTTCATC CCA GTCGAAAATG TTTTTATTGATTTAT TERM 2114 2077581 - 2077614 + g 76 -4.6 -5.10029 | opp_overlap 2077572 TAAAATTCAAATACT TGATGGTCCCATTT ACGATA AAAAGGGGCAATCA TTTTTTCAAGTTGCT SAV1934 2078283 - 2077903 - | GntR family transcriptional regulator SAV1935 2078717 - 2078541 - | hypothetical protein TERM 2115 2078944 - 2078910 - H 100 -16.6 -2.89981 | opp_overlap 2078913, overlap 2078913 CAGAATTATACTACA CAACCCCAAGTCTGGT ACC AGCAGACTTGGGGTTA TTTATGTGTGTAGGA TERM 2116 2078913 - 2078941 + H 100 -16.1 -4.2028 | opp_overlap 2078910 2078913 AATTATACTACACAA CCCCAAGTCTGGT ACC AGCAGACTTGGGG TTATTTATGTGTGTA TERM 2117 2078941 - 2078913 - H 100 -16.1 -3.58766 | opp_overlap 2078913, overlap 2078910 AATTATACTACACAA CCCCAAGTCTGGT ACC AGCAGACTTGGGG TTATTTATGTGTGTA SAV1936 2079258 - 2080544 + | hypothetical protein TERM 2118 2080555 - 2080588 + T 95 -6.2 -5.93252 | GATAATTAATTTCAA CCAATAATCTGA TGAGTATGAC TCGGATTATTGG TTTTTTATTTTTAAA TERM 2119 2080804 - 2080781 - T 100 -11 -4.39571 | opp_overlap 2080781 TCTACAAATGTAAAA GGCACCCCAC GATT GTGAGATGCC TTATTATAAAATTAA truncated-mapW 2081143 - 2080823 - | truncated map-w protein TERM 2120 2080993 - 2081037 + g 74 -6 -4.46267 | overlap 2081003 TTATCCCTTGATCAT TTGCCATTGCTGATTTAAGT TTTAT ACTTAAATCATTAATTGTAA TTTTGCTTGCATTAT TERM 2121 2081003 - 2081027 + g 77 -8.8 -3.53814 | overlap 2080993 ATCATTTGCCATTGC TGATTTAAGT TTTAT ACTTAAATCA TTAATTGTAATTTTG SAV1938 2082558 - 2081128 - | truncated map-w protein SAV1939 2082904 - 2083143 + | truncated beta-hemolysin TERM 2122 2083313 - 2083356 + F 88 -7.6 -4.88067 | opp_overlap 2083315 TGTTTGTGTGGAATG TACACCCCAAAAGCTAGACT GAAA AATCTATTTTTTGAGGTGTA TTTTTATAGGTAAAT SAV1940 2083515 - 2083694 + | hypothetical protein SAV1941 2083718 - 2084026 + | hypothetical protein TERM 2123 2084317 - 2084290 - T 72 -8.5 -3.25824 | opp_overlap 2084295, overlap 2084295 TATTATCTAGAAAAT TAAAACCACCC TTTTAC GGGTGGTTTTT TAATATTTACTTTTT TERM 2124 2084295 - 2084312 + T 93 -8.4 -5.32699 | opp_overlap 2084290 2084295 TCTAGAAAATTAAAA CCACCC TTTTAC GGGTGG TTTTTTAATATTTAC TERM 2125 2084312 - 2084295 - T 87 -8.4 -4.73108 | opp_overlap 2084295, overlap 2084290 TCTAGAAAATTAAAA CCACCC TTTTAC GGGTGG TTTTTTAATATTTAC SAV1942 2084667 - 2084317 - | hypothetical protein TERM 2126 2084847 - 2084826 - R 100 -9.5 -6.23317 | opp_overlap 2084826 AGAAAAACAAAAAAA GGTAAGCAC CGAA ATGCTTACC TACTTCCCATAAACA TERM 2127 2084826 - 2084847 + r 71 -8.8 -2.73364 | opp_overlap 2084826 AGAAAAACAAAAAAA GGTAAGCA CCGAAA TGCTTACC TACTTCCCATAAACA TERM 2128 2085062 - 2085047 - R 100 -9 -5.69473 | opp_overlap 2085047 2085046 TATAGCACAAAAAAA CTAGCC CGAA GGCTAG CTTATGAATAGATGA TERM 2129 2085047 - 2085062 + r 70 -9 -2.61912 | opp_overlap 2085047, overlap 2085046 TATAGCACAAAAAAA CTAGCC CGAA GGCTAG CTTATGAATAGATGA TERM 2130 2085749 - 2085721 - R 75 -4.6 -5.16133 | gap 1, overlap 2085724 2085725 ATTATAACATAAAAA GCAC-CCCGTAAA CTAT TATACGGGAATGC TAAAGTCATATATAC TERM 2131 2085833 - 2085812 - R 86 -3 -5.89921 | ATCATAAGAAAAAAA CACCCA GTGACATGCT TGGGTG AACAAGGATAGATGT TERM 2132 2085902 - 2085887 - R 79 -5.4 -5.23316 | CATCATAGCAAAAAA CTAGCC CGAA AGCTAG CTATAACATACAATC TERM 2133 2085992 - 2085967 - R 100 -12.7 -5.84432 | TATAACATAAAAAAA TAGGCAAGTAC CGAA GTACCTGCCTA AAAAAGGATTATCCA sak 2086655 - 2086164 - | staphylokinase precursor TERM 2134 2086667 - 2086683 + r 89 -6.7 -5.4433 | GCATGGCGCTTCCTC CAAATAT AAT ATATTTG TTTTTATTTATCTCT SAV1945 2087601 - 2086870 - | lytic enzyme SAV1946 2087867 - 2087613 - | holin-like protein TERM 2135 2087826 - 2087805 - G 70 -2.3 -5.33405 | gap 1 TTGAGCAAATAAAAA GATAGCTGAC AAT ATC-GCTACC CAAAATGATTTTTGT TERM 2136 2087915 - 2087898 - R 85 -5.5 -5.48213 | opp_overlap 2087898 TATCCAAAATAAAAA GACGACC AATA AGCCGTC TATTTGATATTTATA TERM 2137 2087986 - 2087961 - R 100 -10.5 -5.07275 | TTATATATAGAAAAA GGGCAACATGC GCAA ACATGTTACCC TAGTGAGCCCGTTAA TERM 2138 2088047 - 2088081 + r 74 -2.3 -5.5604 | gap 1, opp_overlap 2088062 AAATTAATAACCATT TAACCATCG-AAAC CAGCCAAA GTTAGCGATGGTTA TTTTTTATTGCTTAA SAV1947 2088213 - 2088079 - | hypothetical protein sep 2089146 - 2088364 - | enterotoxin P TERM 2139 2089433 - 2089414 - g 100 -10 -5.54338 | CAATCAAAATAAAAA GCCAGTGC CGAT GCACTGAC CAAAAACATTATTTA SAV1949 2089230 - 2089469 + | hypothetical protein SAV1950 2089884 - 2089510 - | hypothetical protein TERM 2140 2089578 - 2089593 + g 70 -4.6 -4.64861 | opp_overlap 2089569 TTACAAGCGCCCATA TGGCAC CTAC GAGCCA TTTATTTTGGGCGAG TERM 2141 2089930 - 2089908 - R 81 -8.5 -4.16016 | opp_overlap 2089908 CTACTTTCTAAGAAA GCTATGAGC GTAAT GCTCATAAC TTAGTATAGTTACAT SAV1951 2090269 - 2089940 - | phi PVL ORF 22-like protein SAV1952 2090425 - 2090273 - | hypothetical protein SAV1953 2094200 - 2090418 - | phi PVL ORF 20 and 21-like protein TERM 2142 2091159 - 2091171 + g 75 -4.9 -4.87626 | GAATGCGAATCGGTT TAAAC CAG GTTTA TTTTTGGTGTTCGGA TERM 2143 2093561 - 2093575 + g 71 -5.7 -4.61873 | CATTTTCGGGTCCCA CAGCA ATTAA TGCTG TTTTGATTTCTGACA SAV1954 2095700 - 2094216 - | phi PVL orfs 18-19-like protein TERM 2144 2095627 - 2095645 + g 71 -7.4 -3.57144 | opp_overlap 2095627 AAAACATAATTAAAA GAGGGTAT TTC AAACCCTC TTTCGACATACAACC TERM 2145 2095645 - 2095627 - G 82 -7.4 -4.6008 | opp_overlap 2095627 AAAACATAATTAAAA GAGGGTAT TTC AAACCCTC TTTCGACATACAACC SAV1955 2100226 - 2095697 - | phi PVL ORF 15 and 16-like protein TERM 2146 2098490 - 2098504 + g 78 -7.2 -4.30987 | opp_overlap 2098490 2098489 ACCATTAACAAAATT TCTGAA AGT TTCAGA TTTCTTATAAGCAAT TERM 2147 2098809 - 2098820 + g 73 -4.4 -4.9445 | GAAAACCAATCAACC GCTA TAGA TAGC TTTTTGATTAATTCT TERM 2148 2100285 - 2100260 - R 100 -11.3 -5.51165 | AAAAGTTCAAAAAAA TAACCCTAACC AAAC GGTTAAGGTTA AAATGCATCAATTAA SAV1956 2100821 - 2100471 - | hypothetical protein TERM 2149 2100872 - 2100853 - R 88 -7.8 -4.87803 | opp_overlap 2100855, overlap 2100855 TATTTTCAAATAAAA TAGAGGGG TTGC CCCCTCTT ATGCTTCTACATTTA TERM 2150 2100870 - 2100855 - R 95 -10.4 -4.05678 | opp_overlap 2100855, overlap 2100853 TTTTCAAATAAAATA GAGGGG TTGC CCCCTC TTATGCTTCTACATT TERM 2151 2100855 - 2100870 + r 85 -10.4 -3.57441 | opp_overlap 2100855 2100853 TTTTCAAATAAAATA GAGGGG TTGC CCCCTC TTATGCTTCTACATT SAV1957 2101781 - 2101137 - | hypothetical protein TERM 2152 2101610 - 2101621 + g 81 -5.8 -4.93365 | CAATTGGACCGCCAT CAGC ATAA GCTG TTTTTAGTTCTCCAC TERM 2153 2101826 - 2101805 - R 73 -3.6 -5.24129 | opp_overlap 2101806, overlap 2101806 CCTCCTTATAAAAAA TGCCCTCG TAAACG CGAGAGCT TCTATATGTTTTAAA TERM 2154 2101825 - 2101806 - R 71 -7.1 -3.73995 | opp_overlap 2101806, overlap 2101805 CTCCTTATAAAAAAT GCCCTCG TAAACG CGAGAGC TTCTATATGTTTTAA SAV1958 2102189 - 2101782 - | hypothetical protein SAV1959 2102590 - 2102186 - | hypothetical protein SAV1960 2102949 - 2102587 - | hypothetical protein SAV1961 2103217 - 2102933 - | hypothetical protein SAV1962 2103491 - 2103207 - | hypothetical protein TERM 2155 2103332 - 2103354 + g 71 -5.6 -4.58698 | opp_overlap 2103332 TCAGCTTATCTAAAG GTACGATATA AAC TTTGTCGTAC TTATTTTTGATTTGA SAV1963 2104656 - 2103511 - | hypothetical protein SAV1964 2105417 - 2104680 - | phiN315 scaffolding protein-like protein SAV1965 2106588 - 2105401 - | hypothetical protein SAV1966 2108265 - 2106604 - | phage terminase large subunit TERM 2156 2107854 - 2107865 + g 73 -4.4 -4.92777 | AAACGGTTCTGATTT CATC AAAC GATG TTTTTGCTTGATCTT SAV1967 2108606 - 2108262 - | hypothetical protein SAV1968 2109035 - 2108736 - | hypothetical protein TERM 2157 2109165 - 2109143 - R 100 -10.6 -5.38054 | opp_overlap 2109143 2109141 CCTCATAAATAAAAA GACACATCAC ATA GTGATGCGCC TCTTGTTCATGCGTC SAV1969 2109683 - 2109267 - | hypothetical protein SAV1970 2109914 - 2109711 - | phi PVL ORF 60-like protein SAV1971 2110071 - 2109919 - | hypothetical protein SAV1972 2110265 - 2110059 - | hypothetical protein SAV1973 2110455 - 2110282 - | hypothetical protein SAV1974 2111061 - 2110492 - | dUTP pyrophosphatase SAV1975 2111260 - 2111018 - | hypothetical protein SAV1976 2111486 - 2111250 - | phi PVL ORF 52-like protein SAV1977 2111844 - 2111479 - | phi PV83 orf 27-like protein SAV1978 2112101 - 2111859 - | PVL orf 51-like protein SAV1979 2112473 - 2112105 - | phi PVL ORF 50-like protein TERM 2158 2112419 - 2112441 + g 78 -7.1 -4.45738 | ATTCCATTTCAGATT TGGTAAACC TATAT GGTTTATCA TTTATTGTTACAATC SAV1980 2112902 - 2112486 - | hypothetical protein SAV1981 2113117 - 2112899 - | hypothetical protein SAV1982 2114017 - 2113124 - | hypothetical protein SAV1983 2114517 - 2114047 - | single-strand DNA-binding protein TERM 2159 2114450 - 2114462 + g 73 -7.7 -3.86312 | GATGCTACATTTACA CCACT TTG AGTGG TTCTTAATTCTGGGT TERM 2160 2114549 - 2114538 - R 77 -7.2 -4.20025 | opp_overlap 2114538 AACCTCCAACATAAA CGGG CGCG CCCG TCACTTTTTGTATTT SAV1984 2115003 - 2114518 - | hypothetical protein SAV1985 2116136 - 2115216 - | hypothetical protein TERM 2161 2116018 - 2116034 + g 79 -9.5 -3.39327 | opp_overlap 2116015 2116012, overlap 2116015 GGTGAATAATCATTT GGCAATT CCA AATTGCC TTGTGACTCTAAAAC SAV1986 2118081 - 2116138 - | hypothetical protein TERM 2162 2116943 - 2116962 + g 77 -5 -5.10767 | TCTTTCGATTTGCTA GCATTGAA TTTC TGCAATGC TTTTTCTCTTGCCTC SAV1987 2118353 - 2118090 - | hypothetical protein SAV1988 2118622 - 2118362 - | phi PVL orf 39-like protein SAV1989 2118929 - 2118627 - | hypothetical protein TERM 2163 2118988 - 2119013 + r 100 -9.1 -5.72207 | TTTGATGAACACTTA CTGTTACTTGT TGGC GCAAGTAGCAG TTTTTTTACTTTCCA SAV1990 2119180 - 2119019 - | phi PVL ORF 38-like protein TERM 2164 2119149 - 2119161 + g 82 -7.7 -4.4727 | GTAAAGCACAGTACT GCTAC TAG GTAGC TTTTATAAATGTTGC SAV1991 2119497 - 2119177 - | hypothetical protein SAV1992 2119549 - 2120184 + | hypothetical protein SAV1993 2120567 - 2120370 - | phi PVL orf 35-like protein TERM 2165 2120507 - 2120546 + g 90 -3.8 -5.79595 | gap 1 ATTGAATATTAACGG GTCGTCTATTACCTTCT TCGTCAT AGTA-GTAATAGATGAC TTTTTTGTTTTGAGC SAV1994 2121338 - 2120583 - | anti repressor TERM 2166 2121295 - 2121317 + g 74 -3.5 -5.3104 | overlap 2121297 TCTTTTTCTTGTATG TTGAACATT TCGCC GATGTTCGA TTTTGTTTTTAATGC TERM 2167 2121405 - 2121422 + G 76 -4.1 -5.09521 | opp_overlap 2121405, overlap 2121407 TAAGTATGGACATAA TCGCGAT TTGT ATCGCAA TTTTTAGTTTCTTAC TERM 2168 2121882 - 2121897 + G 73 -4.6 -5.01732 | opp_overlap 2121868 AGGTAAGTGCTCTTT CCAACC CCAA GGATGG TTTTTTAAAGAAGTT SAV1995 2121395 - 2121934 + | phi PVL orf 33-like protein TERM 2169 2121956 - 2121979 + T 71 -6.7 -3.9735 | AAAATCCTCCCTTTC CGTCACTCT TTAATT GGAGTGGCG TTGATTTTTTCGTCT SAV1996 2122218 - 2121958 - | phi PVL orf 32-like protein TERM 2170 2122242 - 2122259 + r 85 -8.5 -4.63218 | TCCTATTAAGATGTT TGTACAG TTTT CTGTACA TTTTGTTCAAAAAAA SAV1997 2122474 - 2122232 - | hypothetical protein SAV1998 2122626 - 2123354 + | repressor-like protein SAV1999 2123366 - 2124223 + | hypothetical protein SAV2000 2124268 - 2124450 + | hypothetical protein TERM 2171 2124501 - 2124515 + F 79 -8.5 -3.88766 | opp_overlap 2124499 2124501 ACGTATTGATTAATA GCGCC TATGT GGCGC TTTAATATATAAAGT TERM 2172 2124515 - 2124501 - f 70 -8.5 -3.15699 | opp_overlap 2124501, overlap 2124499 ACGTATTGATTAATA GCGCC TATGT GGCGC TTTAATATATAAAGT SAV2001 2124550 - 2125014 + | hypothetical protein TERM 2173 2125022 - 2125038 + F 82 -8 -4.40692 | ATAATTGATTCCACA GGGTAG CCCGC CTACCC TTATTATTTTTTGCC int 2125073 - 2126110 + | integrase truncated-hlb 2126122 - 2126991 + | truncated beta-hemolysin TERM 2174 2127005 - 2127043 + T 100 -18.4 -3.70919 | opp_overlap 2127007 2127010, overlap 2127007 2127010 AGTGCTCAACTAACT AATAACTCGCTTCGTTCT AAA AGGACGAAGCGAGTTATA TTGTTAAAATTTGAA TERM 2175 2127007 - 2127041 + T 100 -21 -3.4314 | opp_overlap 2127007 2127010, overlap 2127005 2127010 TGCTCAACTAACTAA TAACTCGCTTCGTTCT AAA AGGACGAAGCGAGTTA TATTGTTAAAATTTG TERM 2176 2127041 - 2127007 - T 100 -18.8 -3.45366 | opp_overlap 2127007 2127005 2127010, overlap 2127010 TGCTCAACTAACTAA TAACTCGCTTCGTTCT AAA AGGACGAAGCGAGTTA TATTGTTAAAATTTG TERM 2177 2127010 - 2127038 + T 100 -18.3 -3.8372 | opp_overlap 2127007 2127010, overlap 2127007 2127005 TCAACTAACTAATAA CTCGCTTCGTTCT AAA AGGACGAAGCGAG TTATATTGTTAAAAT TERM 2178 2127038 - 2127010 - T 100 -16.1 -3.86031 | opp_overlap 2127010 2127007 2127005, overlap 2127007 TCAACTAACTAATAA CTCGCTTCGTTCT AAA AGGACGAAGCGAG TTATATTGTTAAAAT TERM 2179 2127184 - 2127224 + T 100 -14.3 -3.72745 | opp_overlap 2127184 2127189, overlap 2127189 CTACTCAAATATAAA TAAAAGTTACCTACTACAT TCT ATGTAGCAGGCAACTTTTA TTACTTATTTCTTTT TERM 2180 2127224 - 2127184 - T 100 -18.7 -4.35044 | opp_overlap 2127184 2127189, overlap 2127189 CTACTCAAATATAAA TAAAAGTTACCTACTACAT TCT ATGTAGCAGGCAACTTTTA TTACTTATTTCTTTT TERM 2181 2127189 - 2127219 + T 100 -9.8 -4.85618 | opp_overlap 2127184 2127189, overlap 2127184 CAAATATAAATAAAA GTTACCTACTACAT TCT ATGTAGCAGGCAAC TTTTATTACTTATTT TERM 2182 2127219 - 2127189 - T 100 -14.2 -5.13648 | opp_overlap 2127189 2127184, overlap 2127184 CAAATATAAATAAAA GTTACCTACTACAT TCT ATGTAGCAGGCAAC TTTTATTACTTATTT SAV2004 2128245 - 2127229 - | hypothetical protein SAV2005 2129322 - 2128267 - | hypothetical protein SAV2006 2129758 - 2130960 + | succinyl-diaminopimelate desuccinylase TERM 2183 2131015 - 2131034 + F 81 -9.4 -3.6761 | opp_overlap 2131019, overlap 2131019 ATTGCATTGTCTATT GAAATTGG GAAT CCAATTTC TCTTTGTTGAGGCCC TERM 2184 2131098 - 2131117 + F 78 -9.3 -3.28979 | TTCGAAATTCTCTGT GTTGGGG CCCCCA CCCCAAC TTGCATTGTCTGTTG TERM 2185 2131132 - 2131151 + F 76 -9.4 -3.09273 | opp_overlap 2131136, overlap 2131136 CTTGCATTGTCTGTT GAAATTGG GAAT CCAATTTC TCTGTGTTGGGGCCC SAV2007 2131268 - 2132575 + | Na+transporting ATP synthase TERM 2186 2132629 - 2132658 + F 100 -11.7 -5.88476 | opp_overlap 2132636, overlap 2132636 TTAATCTATTACATT TAAAAAACTACCT AAAC AGGTAGTTTTTTG TTTTTTATTTATTTT TERM 2187 2132651 - 2132636 - f 90 -7.6 -5.13473 | opp_overlap 2132636 2132629 ATTACATTTAAAAAA CTACCT AAAC AGGTAG TTTTTTGTTTTTTAT TERM 2188 2132636 - 2132651 + F 100 -7.6 -6.07374 | opp_overlap 2132636, overlap 2132629 ATTACATTTAAAAAA CTACCT AAAC AGGTAG TTTTTTGTTTTTTAT TERM 2189 2133017 - 2132979 - f 82 -5.3 -5.39721 | opp_overlap 2132979 TTAGCACATAAAAAA GACGCCTCTCATAAGTT TAGTC AACTAATGGAAGGTGTC TTAAATTAAAATATT TERM 2190 2133613 - 2133626 + G 70 -3.9 -5.00234 | AAAAGATTATTATTT GTAAT TGTT ATTAC TTTATTTATTTTTTC sel 2133592 - 2134314 + | extracellular enterotoxin L TERM 2191 2134352 - 2134380 + T 100 -11.2 -3.92267 | gap 1, opp_overlap 2134352 TCACTGTATAAATAA CCGCACTTTCTAT TAAT ATAGAA-GTGCGG TTTAATCTATATATA TERM 2192 2134380 - 2134352 - T 100 -11.2 -4.07877 | gap 1, opp_overlap 2134352 TCACTGTATAAATAA CCGCACTTTCTAT TAAT ATAGAA-GTGCGG TTTAATCTATATATA TERM 2193 2134432 - 2134411 - T 81 -7.3 -4.62783 | opp_overlap 2134411 TATGCATCCTAAAAA GGCAAGCAC CGAA GTACTTACC TTTCAAATATATCTA sec3 2135283 - 2134483 - | enterotoxin typeC3 TERM 2194 2135807 - 2135782 - H 100 -14.9 -3.95786 | opp_overlap 2135789 ATAGAGATATAATAA TAGGCAAGTAC CGAA GTACTTGCCTA AATATCAACAAGATT TERM 2195 2135868 - 2135851 - H 90 -7.7 -5.33026 | TAATGGAAATAAAAA GTCAGCC CGAA GGCTAAC TTACGAATAGATGAA SAV2010 2136070 - 2136630 + | hypothetical protein TERM 2196 2136641 - 2136661 + F 93 -8.3 -5.07652 | AATAACTTTTTTCGA GAGGCAG ATTACTC CTGCCTC TTTTCTTTTGAACAG tst 2137509 - 2138213 + | toxic shock syndrome toxin-1 SAV2012 2138937 - 2138368 - | bacteriophage terminase small subunit SAV2013 2139146 - 2138934 - | hypothetical protein SAV2015 2139804 - 2139277 - | hypothetical protein TERM 2197 2139846 - 2139826 - R 74 -9 -3.33798 | opp_overlap 2139845 ACCCCTATAAACAGA GCCTACCC GAATT GGATAGGC AATCATTGCTATTTA SAV2016 2140073 - 2139855 - | hypothetical protein SAV2017 2140669 - 2140091 - | hypothetical protein SAV2018 2141022 - 2140681 - | hypothetical protein SAV2019 2142111 - 2141470 - | hypothetical protein TERM 2198 2142022 - 2142010 - G 73 -7.7 -3.80893 | opp_overlap 2142009 ATTGTATAACTTAAA GCAAC ACG GTTGC ACTTTACTATGTTCT SAV2020 2142488 - 2142108 - | hypothetical protein SAV2021 2144507 - 2142798 - | hypothetical protein SAV2022 2145390 - 2144521 - | hypothetical protein SAV2023 2145781 - 2145455 - | hypothetical protein TERM 2199 2145483 - 2145520 + g 74 -3.4 -5.22289 | TTTATTGAATTCTTT GCGTCATCTGATTCCT CGCCAA AGTTCTCAGATGATGC TTTTTCTATTTCATA SAV2024 2145993 - 2145784 - | hypothetical protein SAV2025 2146446 - 2146129 - | hypothetical protein SAV2026 2146669 - 2146451 - | hypothetical protein TERM 2200 2147370 - 2147356 - g 79 -3.6 -5.47218 | TGTTATTTAAAAAAA TTAACC AAA AGTTAA GTGGGTATGTTTCTG SAV2027 2146842 - 2147516 + | hypothetical protein TERM 2201 2148684 - 2148646 - g 100 -12.6 -5.38951 | AACTCATACAAAAAA GACGCTTCCCAAAAGTTT AGT AAACTCATGGAAAACGTC TCAAAAGATTTATTT int 2147530 - 2148702 + | integrase groEL 2150387 - 2148771 - | chaperonin GroEL TERM 2202 2148881 - 2148858 - G 77 -9 -3.62597 | gap 1, opp_overlap 2148858 2148861 2148865, overlap 2148861 TTCAGTCGTTAAGAA CATTGCTGCAA CAC TTGCAGC-ATG TTGTAATGCTGAGCG TERM 2203 2148858 - 2148881 + g 75 -9 -3.44051 | gap 1, opp_overlap 2148858 2148861, overlap 2148861 2148865 TTCAGTCGTTAAGAA CATTGCTGCAA CAC TTGCAGC-ATG TTGTAATGCTGAGCG TERM 2204 2148879 - 2148861 - G 84 -11.8 -2.63252 | opp_overlap 2148858 2148861 2148865, overlap 2148858 AGTCGTTAAGAACAT TGCTGCAA CAC TTGCAGCA TGTTGTAATGCTGAG TERM 2205 2148861 - 2148879 + g 89 -11.8 -3.29273 | opp_overlap 2148861 2148858, overlap 2148858 2148865 AGTCGTTAAGAACAT TGCTGCAA CAC TTGCAGCA TGTTGTAATGCTGAG TERM 2206 2149938 - 2149965 + g 76 -2.7 -5.46706 | opp_overlap 2149944, overlap 2149944 TTCTTCATCTGCTGC TGAAATCGCAC CTACTT GCGCTATTTCA TTTTTATTTTCAACT groES 2150747 - 2150463 - | co-chaperonin GroES TERM 2207 2151073 - 2151093 + G 84 -8.3 -4.5287 | AACTTGTTCTATTTT TAATCGCCG CCA CGACGATTA TTTTAATTAATTTAA SAV2031 2150922 - 2151665 + | hypothetical protein TERM 2208 2151675 - 2151708 + T 95 -6.2 -5.77734 | gap 2, opp_overlap 2151675 CCATAATATAAAAAA CGAATCACA-C-ACGG ATTA TCGTCGCTGTGATTCG TTTTTATTTTTCTTT TERM 2209 2151708 - 2151675 - T 88 -5.5 -5.5208 | gap 2, opp_overlap 2151675 CCATAATATAAAAAA CGAATCACA-C-ACG GATTAT CGTCGCTGTGATTCG TTTTTATTTTTCTTT SAV2032 2152937 - 2151690 - | hypothetical protein TERM 2210 2152066 - 2152077 + g 71 -3 -5.09259 | CCATTTAAATATGCA TTTC CGCT GAAA TTTTGTTTTCGAATA TERM 2211 2152507 - 2152530 + g 79 -8.2 -3.90943 | overlap 2152508 TTTGGTTTCGGGTTA TCTGGATCTG GTTT TGGATCCAGA TTTGGCTTTGGTTTA TERM 2212 2153429 - 2153417 - g 74 -2 -5.5074 | CAACTGAACAAAAAA TTGA TAACT TCAA ACATTCATACGGTAC SAV2033 2153134 - 2153760 + | hypothetical protein TERM 2213 2153889 - 2153869 - f 93 -11.3 -3.4691 | opp_overlap 2153873 ACTTAAGAATAGGAA TACATGAGT AAA ACTCATGTA TAAGAAATACTAATT TERM 2214 2153961 - 2153980 + F 76 -9.4 -3.09273 | opp_overlap 2153965, overlap 2153965 CTTGCATTGTCTGTA GAAATTGG TGTT CCAATTTC TCTATGTTGGGGCCC SAV2034 2154121 - 2154906 + | hypothetical protein TERM 2215 2154943 - 2154984 + T 100 -14.9 -5.67063 | opp_overlap 2154947 AACACATGTCATGAC TAAACATAGATTTATGAGA GATT TTTCATAAGTCTATGTTTA TTTTTTTATAATAGA TERM 2216 2155187 - 2155159 - T 90 -7.4 -5.58179 | overlap 2155131 TATTACAATAAAAAA GGCCGCGAGC TTGGGAGGG GCTCACGACC ATACTTATTATTAAG hld 2155640 - 2155506 - | delta-hemolysin TERM 2217 2155686 - 2155696 + H 72 -5.4 -4.69559 | opp_overlap 2155684 2155686 AGTTATATTAAAACA TGCT AAA AGCA TTTATTTTCCAATTT TERM 2218 2156120 - 2156140 + G 75 -7 -4.26792 | overlap 2156108 ATGCAAAGTCTTCGA TACTTTGT TACAT ACAAAGTA TTTTAACATTTGTAT agrB 2155876 - 2156439 + | accessory gene regulator B agrD 2156442 - 2156585 + | AgrD protein TERM 2219 2156722 - 2156749 + F 81 -6.4 -5.1485 | opp_overlap 2156726, overlap 2156724 AAGGGATTATTTTAT TATAGTTGGAAT TATA ATTCCAACCATG TTTTTGTATTACTTC TERM 2220 2156724 - 2156747 + F 72 -6.8 -4.18115 | opp_overlap 2156726, overlap 2156722 GGGATTATTTTATTA TAGTTGGAAT TATA ATTCCAACCA TGTTTTTGTATTACT TERM 2221 2156745 - 2156726 - f 74 -9.4 -2.80113 | opp_overlap 2156724 2156722 GATTATTTTATTATA GTTGGAAT TATA ATTCCAAC CATGTTTTTGTATTA TERM 2222 2157082 - 2157094 + G 95 -6.3 -5.90231 | TTCATTCGTATTATT TGCAA CAT TTGCA TTTTTTTATATTTAT agrC 2156783 - 2157898 + | accessory gene regulator C agrA 2157917 - 2158633 + | accessory gene regulator A SAV2040 2159964 - 2159005 - | fructokinase TERM 2223 2159198 - 2159214 + g 74 -6.5 -4.3208 | AAAGCATCCCCTGCC CCAGTTG TAT CAACAGG TTTTACCTTATAGCC scrB 2161445 - 2159961 - | sucrose-6-phosphate hydrolase scrR 2162544 - 2161594 - | sucrose operon repressor TERM 2224 2162702 - 2162667 - R 75 -5.6 -4.77165 | gap 1 TTTTGTATAACAAAA TGTCCCAACA-TCAACC TTT AGTTAAATGTCAGGACA ATGAATATTCTATGT nrgA 2163977 - 2162727 - | probabale ammonium transporter TERM 2225 2162970 - 2162981 + g 70 -2.2 -5.37593 | opp_overlap 2162958 AAAGCCATTCTCAAT GTCA GGAT TGGC TTTTTTACTTTGGAA SAV2044 2164409 - 2164185 - | hypothetical protein SAV2045 2165548 - 2164469 - | hypothetical protein TERM 2226 2165794 - 2165770 - R 81 -5.7 -5.18995 | opp_overlap 2165784 AACATAACAGAAAAA GCCTGAGAC ATACTTA GTCCCAGAC TGTTCTATAATTAAT SAV2046 2166487 - 2165852 - | redox-sensing transcriptional repressor Rex TERM 2227 2168211 - 2168190 - g 77 -5.9 -4.70515 | opp_overlap 2168190, overlap 2168204 TAGATTCAAAAGAAA TGTTAGAGC AAGC ACTCCAACA TTTTGAAGGAACAAT vga 2166740 - 2168668 + | ABC transporter TERM 2228 2168712 - 2168678 - f 72 -8.1 -3.37205 | opp_overlap 2168678, overlap 2168676 2168674 2168681 CTATAAAAATATACA TAACTCTAACTGTAA ATTCG CTATAGTTAGAGTTA TTTTTTTACAAATTT TERM 2229 2168678 - 2168712 + F 100 -9.6 -5.4477 | opp_overlap 2168678 2168676 2168674 2168681 CTATAAAAATATACA TAACTCTAACTGTA AATTCGC TATAGTTAGAGTTA TTTTTTTACAAATTT TERM 2230 2170214 - 2170241 + G 70 -8.4 -3.2963 | ACCTGGAATTGTGTT CACGTCAATGGC AAAT GCCGATGATGTG TTATCAGGCGATAGT SAV2048 2169030 - 2170640 + | DNA mismatch repair protein MutS TERM 2231 2170671 - 2170648 - T 70 -9 -2.52635 | opp_overlap 2170661, overlap 2170647 2170661 ATGGTTAGCATGAAT CTTGAACATC AATC AATGTTCAAG TCGCAACATTGTTAT SAV2049 2171980 - 2170955 - | O-sialoglycoprotein endopeptidase SAV2050 2172437 - 2171973 - | ribosomal-protein-alanine N-acetyltransfer SAV2051 2173099 - 2172410 - | hypothetical protein SAV2052 2173514 - 2173053 - | hypothetical protein TERM 2232 2173850 - 2173895 + H 70 -5.8 -4.35044 | gap 2, overlap 2173890 TTTTATTATACTCTT TAGGACTCGAA-CG-TTAGTAA ATAT TTACTAAACGCTTTAAGTCCTA TTTCTGTTTGAATGG TERM 2233 2173921 - 2173941 + H 100 -14.1 -5.9362 | opp_overlap 2173921, overlap 2173907 AATGGGACTTGTAAA CGTCCCAAT AAT ATTGGGACG TTTTTTTATGTTTTA TERM 2234 2173941 - 2173921 - H 100 -14.1 -3.5764 | opp_overlap 2173907 2173921 AATGGGACTTGTAAA CGTCCCAAT AAT ATTGGGACG TTTTTTTATGTTTTA ilvD 2174025 - 2175713 + | dihydroxy-acid dehydratase ilvB 2175741 - 2177510 + | acetolactate synthase large subunit TERM 2235 2177726 - 2177702 - g 76 -3.7 -5.31059 | overlap 2177690 ATATTAATTAAAAAA TTAAAACAACA AAT TAATGTTTTAA CGGTTGAATGCTACG SAV2055 2177510 - 2177764 + | acetolactate synthase 1 regulatory subunit TERM 2236 2178533 - 2178517 - g 73 -8.1 -3.54408 | opp_overlap 2178514 GTGTATCGAAATTAA TTCAAAG TGG CTTTGAA ACATTAGTAGAAGCG ilvC 2177901 - 2178905 + | ketol-acid reductoisomerase TERM 2237 2180049 - 2180039 - g 77 -5.4 -4.96501 | overlap 2180035 GCGGACAAAAAGAAA TCTG TTT CAGA TAGAGATATTCATGC leuA 2178935 - 2180464 + | 2-isopropylmalate synthase TERM 2238 2180579 - 2180608 + G 73 -8.7 -3.21912 | gap 1, opp_overlap 2180579 2180583 ACTTTAATTATCAAA TAGA-GCACCACGA ATT TGGTGGTGCCTCTA TTGATACATTCGGCG TERM 2239 2180608 - 2180579 - g 79 -8.7 -3.84514 | gap 1, opp_overlap 2180579, overlap 2180583 ACTTTAATTATCAAA TAGA-GCACCACGA ATT TGGTGGTGCCTCTA TTGATACATTCGGCG TERM 2240 2180603 - 2180583 - g 79 -9.7 -3.32233 | opp_overlap 2180579, overlap 2180579 TAATTATCAAATAGA GCACCACGA ATT TGGTGGTGC CTCTATTGATACATT leuB 2180467 - 2181513 + | 3-isopropylmalate dehydrogenase leuC 2181527 - 2182897 + | isopropylmalate isomerase large subunit leuD 2182898 - 2183470 + | isopropylmalate isomerase small subunit ilvA 2183485 - 2184753 + | threonine dehydratase TERM 2241 2184769 - 2184811 + T 90 -7.9 -5.25772 | opp_overlap 2184770, overlap 2184770 CACATAGTAAGAAAA ACAGTCATAAATTGATTTC TAATT GAAATCATCTTATGACTGC TTTTTATTATACTTT TERM 2242 2184770 - 2184810 + T 95 -11.4 -3.73023 | opp_overlap 2184770, overlap 2184769 ACATAGTAAGAAAAA CAGTCATAAATTGATTTC TAATT GAAATCATCTTATGACTG CTTTTTATTATACTT TERM 2243 2184810 - 2184770 - T 100 -13.6 -5.17744 | opp_overlap 2184770 2184769 ACATAGTAAGAAAAA CAGTCATAAATTGATTTC TAATT GAAATCATCTTATGACTG CTTTTTATTATACTT TERM 2244 2184937 - 2184922 - T 100 -9 -5.76633 | TTAGACATAAAAAAA GAGACC TTGC GGTCTC AATGCGGCTCATCGC TERM 2245 2185214 - 2185199 - T 100 -9 -5.76633 | TTAGACATAAAAAAA GAGACC TTGC GGTCTC AACTTGCCTGGCAAC TERM 2246 2185470 - 2185456 - T 100 -10 -6.06529 | TAGACATAAAAAAAA GAGACC TGC GGTCTC AACTTGCCTGGCAAC TERM 2247 2188291 - 2188310 + T 90 -10.8 -3.66803 | opp_overlap 2188290 2188289 GAGTGTCCTACAACC CCAACAAG CAAG CTTGTTGG TTTGGGCTCTTCCCG TERM 2248 2188667 - 2188694 + T 70 -5.6 -4.28115 | AACGCGTTATTAATC TTGTGAGTGTTC TTTC GAACACTAGCGA TTATTTCTTATGAAT TERM 2249 2188993 - 2188966 - T 73 -3.7 -5.27477 | gap 1, overlap 2188968 2188985 2188987 ACTTTAACCAAAAAA TATTTGAATGTT AAATA AACATTCAAA-A CTGAATACAATATGT TERM 2250 2188992 - 2188968 - T 84 -8.8 -4.26777 | overlap 2188966 2188985 2188987 TTTAACCAAAAAATA TTTGAATGTT AAATA AACATTCAAA ACTGAATACAATATG TERM 2251 2189973 - 2189991 + T 71 -8.8 -2.75963 | overlap 2189972 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT TERM 2252 2190404 - 2190425 + T 83 -10.3 -3.25079 | overlap 2190401 AAGACCGTCTTTTAC TTTTGAACC ATGC GGTTCAAAA TATTATCCGGTATTA TERM 2253 2190650 - 2190666 + T 73 -5.9 -4.66833 | overlap 2190651 ATACTAAATAATGTT TGTAACT TAT AGTTACG TTTTTGGAGTTAACG TERM 2254 2190757 - 2190777 + T 70 -6.1 -4.19506 | opp_overlap 2190757 2190759 GAATCGAACCCACAA CATCAGCTT GGA AGGCTGAGG TTTTGCCATTAAACT TERM 2255 2191406 - 2191369 - T 83 -7.8 -4.59069 | gap 1, opp_overlap 2191369 ATCATAAGTAGAAAA GCCGAGATTG-CGAAGT ATTAA ATTACGACAATCTCGGC TTTAAACATTTTATA TERM 2256 2191369 - 2191406 + T 83 -10 -3.67737 | gap 1, opp_overlap 2191369 ATCATAAGTAGAAAA GCCGAGATTG-CGAAGT ATTAA ATTACGACAATCTCGGC TTTAAACATTTTATA SAV2062 2192006 - 2191551 - | hypothetical protein SAV2063 2194149 - 2191999 - | transcription accessory protein TERM 2257 2194536 - 2194503 - R 79 -5.5 -5.04222 | gap 1 TAATTAAATTAAAAA TACCCCTCGATT-TCA ATT TAATAATCAAGGGATA ATTATATGGATTTTT sigB 2195353 - 2194583 - | RNA polymerase sigma factor SigB rsbW 2195807 - 2195328 - | serine-protein kinase RsbW TERM 2258 2195603 - 2195622 + gr 76 -4.4 -5.05113 | TTTCAAAATATATGT TAATAATG CCCA CATTGTTA TTTTCTTTGTATGCA rsbV 2196135 - 2195809 - | anti-sigmaB factor antagonist rsbU 2197255 - 2196254 - | sigmaB regulation protein TERM 2259 2196359 - 2196370 + g 89 -3 -5.80248 | AATATCTTGTGGGTG CATA TGTT TATG TTTTTTTATATATTC TERM 2260 2197420 - 2197399 - R 86 -5.3 -5.53288 | gap 1 TTTAAGCTAAAAAAA CTTTAGG-AT GGA ATACCTAAAG CCTAAAAAACTTAAG TERM 2261 2197469 - 2197457 - R 85 -4.9 -5.55769 | TTTTATAATAAAAAA TATGA ATA TCATA ACTGGTATTTGCTAA SAV2068 2197966 - 2197604 - | PemK family protein TERM 2262 2197816 - 2197856 + g 71 -7.9 -3.68324 | gap 1, opp_overlap 2197819, overlap 2197813 2197819 GTATTTTCGCTTTAT TAATCCTACCAGTTATTG CCGCAA CAATAACTG-TAGGACTA TATTTATTACCAGTA TERM 2263 2197853 - 2197819 - G 80 -10.3 -3.14132 | gap 1, opp_overlap 2197819 2197816 2197813 TTTTCGCTTTATTAA TCCTACCAGTTATTGC CGCA ACAATAACT-GTAGGA CTATATTTATTACCA TERM 2264 2197819 - 2197853 + g 75 -9.6 -2.64561 | gap 1, opp_overlap 2197819, overlap 2197816 2197813 TTTTCGCTTTATTAA TCCTACCAGTTATTG CCGCAA CAATAACTG-TAGGA CTATATTTATTACCA SAV2069 2198133 - 2197963 - | hypothetical protein alr 2199366 - 2198218 - | alanine racemase dpj 2199791 - 2199432 - | holo-ACP synthase SAV2072 2200286 - 2199795 - | hypothetical protein SAV2073 2201856 - 2200273 - | hypothetical protein TERM 2265 2201762 - 2201747 - G 74 -6.2 -4.48987 | TTCGTATAATCAAAA TCTTTC AATT GAAAGA TAATGAAAATAAAAA SAV2074 2202328 - 2201849 - | hypothetical protein TERM 2266 2202523 - 2202491 - R 73 -5.8 -4.62471 | gap 1, opp_overlap 2202518 TTGAATTGCTAAAAA GACACCATGTT-ATA ATTT TATCAACATGATGCC TTTCATCTATAATCA kdpC 2203096 - 2202536 - | potassium-transporting ATPase C chain kdpB 2205143 - 2203116 - | potassium-transporting ATPase B chain TERM 2267 2203846 - 2203832 - G 74 -6.4 -4.42062 | opp_overlap 2203845, overlap 2203836 CATCTTTTAAATAAA TCACGC CAA GCATGA CATTGTTTTCAATGA TERM 2268 2204363 - 2204347 - G 74 -6.5 -4.30987 | opp_overlap 2204347 ATCGCCGATAACAAA CCACCGA TTG TCGTTGG TATTAAACATACTGT kdpA 2206838 - 2205162 - | potassium-transporting ATPase subunit A kdpD 2207110 - 2209767 + | sensor protein kdpE 2209767 - 2210462 + | KDP operon transcriptional regulatory protein TERM 2269 2210509 - 2210475 - T 93 -5.7 -5.72053 | opp_overlap 2210475 TAATTAAATAAAAAA GATCGCTGCCATTAA ACGAA TGATTGGCAGTGATC TTTTTTATATTCAAC TERM 2270 2210475 - 2210509 + T 95 -7.9 -5.47159 | opp_overlap 2210475 TAATTAAATAAAAAA GATCGCTGCCATTAA ACGAA TGATTGGCAGTGATC TTTTTTATATTCAAC TERM 2271 2210849 - 2210879 + T 72 -4.7 -4.9041 | gap 1 GAGTTTTTATTATTA GGCGGCC-AGTCCA TTAT TGGGCTTGGTTGTC TTCTTTTTTTCTCCT tnp 2212165 - 2210846 - | transposase TERM 2272 2212266 - 2212245 - R 82 -4.4 -5.52384 | overlap 2212248 TGTGTATTAAAAAAA GCAGGAAG TTTTAC CTTCCCAC CATAAAAGATGAAGA TERM 2273 2212321 - 2212294 - R 76 -2.8 -5.57396 | gap 1 AGAACCAACAAAAAA GAGCTCAA-GACA TTA CATCTTTAAGCTC TTAATCTATAAATTA SAV2081 2213854 - 2212334 - | ATP-dependent RNA helicase TERM 2274 2213236 - 2213250 + g 70 -3.6 -4.84363 | CAGACATTTCATTAT TCATTG TCT TAATGA TTTTTGGTGATTTCA TERM 2275 2213575 - 2213557 - G 73 -7.4 -3.82205 | CGAATACAGTAACAA CTTGGACA CCT TGTCCACG GCTAAATTCTCTTAA TERM 2276 2214303 - 2214274 - R 91 -5.1 -5.71295 | ACATAAAAAGAAAAA GGCAATTTTGTAT TTAC ACACAAAACCACC TCTTCTTTGTAATCT murF 2215729 - 2214371 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase ddl 2216814 - 2215744 - | D-alanyl-alanine synthetase A SAV2084 2217132 - 2218334 + | rod shape determining protein RodA TERM 2277 2218445 - 2218490 + T 100 -9.9 -4.85918 | opp_overlap 2218445 ACTCGATAATAACAA TCCCTCTTTGAAGTACACATT GTAA AATGTACACTCTAAAGAGGGA TTTTGTTATATAGTA TERM 2278 2218490 - 2218445 - T 100 -14.3 -4.03219 | opp_overlap 2218445 ACTCGATAATAACAA TCCCTCTTTGAAGTACACATT GTAA AATGTACACTCTAAAGAGGGA TTTTGTTATATAGTA TERM 2279 2218565 - 2218539 - T 100 -12.4 -5.10497 | opp_overlap 2218539 AATCCAGTCAAAAAA GCTATCATCGAA TAG TCCGACGATAGC TTTAACGGTGTGTGA TERM 2280 2218539 - 2218565 + T 72 -8 -3.60234 | opp_overlap 2218539 AATCCAGTCAAAAAA GCTATCATCGAA TAG TCCGACGATAGC TTTAACGGTGTGTGA SAV2085 2218735 - 2218598 - | hypothetical protein TERM 2281 2218651 - 2218665 + g 80 -2.9 -5.63374 | AAGTATTAATAATGT CTAAA CGAGA TTTAG TTTTTTTAATATTCA SAV2086 2219072 - 2218863 - | hypothetical protein SAV2087 2219377 - 2219084 - | hypothetical protein TERM 2282 2219438 - 2219448 + H 70 -5.4 -4.60041 | AAAACACAACGTCAA CACA AAG TGTG TTTTTCAAACTAAAT TERM 2283 2219851 - 2219839 - g 75 -4.9 -5.00884 | AGCTGCTTTAAAAAA TGAAA ACT TTTCA AATTCCAATTATCAA SAV2088 2219543 - 2221027 + | cardiolipin synthetase SAV2089 2221055 - 2221702 + | hypothetical protein TERM 2284 2222339 - 2222393 + T 100 -17.7 -3.93004 | gap 1, opp_overlap 2222329 2222339 2222345, overlap 2222345 TAATATTATTTCAAA TAAAAACAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTGTTTCTA TTTATCACATATTGT TERM 2285 2222393 - 2222339 - T 100 -17.7 -3.63782 | gap 1, opp_overlap 2222339 2222345, overlap 2222329 2222345 TAATATTATTTCAAA TAAAAACAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTGTTTCTA TTTATCACATATTGT TERM 2286 2222345 - 2222387 + T 100 -16.7 -4.40003 | gap 1, opp_overlap 2222339 2222345, overlap 2222339 TATTTCAAATAAAAA CAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTG TTTCTATTTATCACA TERM 2287 2222387 - 2222345 - T 100 -14.5 -5.28942 | gap 1, opp_overlap 2222345 2222339, overlap 2222339 TATTTCAAATAAAAA CAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTG TTTCTATTTATCACA TERM 2288 2222446 - 2222498 + T 100 -13.9 -3.67976 | gap 1, opp_overlap 2222446, overlap 2222449 TATTGAAGCGAAAAA TAATGTGCGCCCTATAAAGTTAAA ATTATC TTCAACTTT-TAGGGTGCACATTA TTTGGACTTGCTAAG TERM 2289 2222498 - 2222446 - T 100 -14.6 -4.75174 | gap 1, opp_overlap 2222446 2222449 TATTGAAGCGAAAAA TAATGTGCGCCCTATAAAGTTAAAA TTAT CTTCAACTTT-TAGGGTGCACATTA TTTGGACTTGCTAAG TERM 2290 2222449 - 2222495 + T 100 -11.2 -3.97019 | gap 1, opp_overlap 2222446, overlap 2222446 TGAAGCGAAAAATAA TGTGCGCCCTATAAAGTTAAA ATTATC TTCAACTTT-TAGGGTGCACA TTATTTGGACTTGCT SAV2090 2223387 - 2222515 - | lipoprotein precursor TERM 2291 2223038 - 2223050 + g 85 -4.1 -5.68489 | ACTTGCATTAATTCT TGGTT TGC AGCCA TTTTTTCTTCTTGTG thiE 2224114 - 2223473 - | thiamin phosphate synthase thiM 2224907 - 2224116 - | hydroxyethylthiazole kinase thiD 2225721 - 2224891 - | phosphomethylpyrimidine kinase SAV2094 2226403 - 2225714 - | transcriptional activator TenA TERM 2292 2226452 - 2226432 - R 100 -9.1 -5.95539 | opp_overlap 2226432 CCCTAAATAAAAAAA CTACTTCCA ACA TGAAAGTAG TTTGATGGCAATGTT TERM 2293 2226745 - 2226707 - R 100 -16.2 -5.63517 | opp_overlap 2226717 TTGCGAAATAAAAAA GACCGGAACATATCGAGA ATT CCCCGATATATTCCGATC TAAAAGTTACTTATA SAV2095 2227485 - 2226790 - | SceD precursor TERM 2294 2226875 - 2226885 + g 74 -6.8 -4.32857 | TCAGGAGCATTTGCT GGTG ATA CACC TTTATATTTAGCAGG TERM 2295 2227785 - 2227749 - R 75 -4.5 -5.07941 | overlap 2227751 AAAACTACACAAAAA GACGACCTACACAAC AGTACTA GTCATGTAAGTCGTT TTTAATTGAGTATAT TERM 2296 2227783 - 2227751 - R 75 -7.1 -4.13652 | overlap 2227749 AACTACACAAAAAGA CGACCTACACAAC AGTACTA GTCATGTAAGTCG TTTTTAATTGAGTAT SAV2096 2228269 - 2227874 - | single strand DNA binding protein TERM 2297 2228176 - 2228196 + g 77 -5.5 -5.01497 | TATAATTTCGGTGCG TTGCAAC ACAAAAC GTTGCAA TTTTTCTATCCTCCT SAV2097 2228463 - 2228903 + | hypothetical protein TERM 2298 2228913 - 2228950 + T 100 -3.1 -6.37666 | gap 2, opp_overlap 2228913 GAGTAAAATAAAAAA CATTCAAAGA-TT-ATG CCAACA CATTAAATCTTTGAATG TTTTTTTTGTTTTAT TERM 2299 2228950 - 2228913 - T 87 -3.8 -5.83211 | gap 2, opp_overlap 2228913 GAGTAAAATAAAAAA CATTCAAAGA-TT-ATGC CAAC ACATTAAATCTTTGAATG TTTTTTTTGTTTTAT SAV2098 2229402 - 2228962 - | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase murA 2230701 - 2229436 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SAV2101 2231045 - 2230812 - | hypothetical protein TERM 2300 2231414 - 2231434 + r 93 -11.3 -3.61527 | opp_overlap 2231418 AATTAGTATTTCTTA TACATGAGT TTT ACTCATGTA TTCCTATTTTTAAAT TERM 2301 2231567 - 2231598 + r 100 -16 -4.60648 | opp_overlap 2231567 ATATAATTCAAAAAA GGGTCGAAGATATG AAAT CACATCTTCGACCC TTTATTTACTATTTT TERM 2302 2231598 - 2231567 - R 100 -18.2 -5.20154 | opp_overlap 2231567 ATATAATTCAAAAAA GGGTCGAAGATATG AAAT CACATCTTCGACCC TTTATTTACTATTTT atpC 2232011 - 2231607 - | F0F1 ATP synthase subunit epsilon atpD 2233443 - 2232031 - | F0F1 ATP synthase subunit beta atpG 2234331 - 2233465 - | F0F1 ATP synthase subunit gamma TERM 2303 2234176 - 2234186 + g 71 -5.4 -4.46155 | opp_overlap 2234176, overlap 2234167 TGCAACTGCAGTAAT TGCA TCT TGCA TTTTATCCATATATG atpA 2235870 - 2234362 - | F0F1 ATP synthase subunit alpha TERM 2304 2235124 - 2235105 - G 83 -8 -4.40993 | opp_overlap 2235104 2235107, overlap 2235123 CATAAACGATTAAAA CATGTTTA CCGT TAAACATG AATTCTTCACCCATT atpH 2236431 - 2235892 - | F0F1 ATP synthase subunit delta atpF 2236952 - 2236431 - | F0F1 ATP synthase subunit B atpE 2237362 - 2237150 - | F0F1 ATP synthase subunit C atpB 2238133 - 2237405 - | F0F1 ATP synthase subunit A SAV2110 2238507 - 2238154 - | hypothetical protein mnaA 2239804 - 2238674 - | UDP-GlcNAc 2-epimerase TERM 2305 2239069 - 2239082 + g 73 -4.5 -4.91712 | TCTTTTGAGCCACCT CTCGA ACTT TCGGG TTTTTATGCATTGGA TERM 2306 2239396 - 2239423 + g 82 -8.6 -3.99806 | CACCAACTAATTGTC TATTCACCTCTT CTGG AAAAGGTGAATA TTTATCATAACTTCT upp 2240454 - 2239825 - | uracil phosphoribosyltransferase glyA 2241720 - 2240482 - | serine hydroxymethyltransferase SAV2114 2242271 - 2241747 - | hypothetical protein TERM 2307 2242325 - 2242301 - R 100 -10.1 -5.93252 | opp_overlap 2242299 2242301 CCTAAAAATAAAAAA GGAATATAGCA AAG TGCTACACTCC TCTATTATAACTTAT SAV2115 2242797 - 2242378 - | phosphatase SAV2116 2243840 - 2242794 - | hypothetical protein TERM 2308 2243917 - 2243883 - R 70 -3.7 -5.08367 | gap 1 AATATAAAGCAAAAA GCTATGCACTTAACTA ATCA TAGCAAAG-GCATAAC TTCTAATTACCATTT SAV2117 2244760 - 2243924 - | protoporphyrinogen oxidase TERM 2309 2244717 - 2244740 + g 79 -5.4 -5.04733 | opp_overlap 2244723 AACCCTTTTTGTTGT GTTAAATGAA TTGC TTCATCTAAC TTTTCTTTATAATTC prfA 2245823 - 2244747 - | peptide chain release factor 1 tdk 2246423 - 2245824 - | thymidine kinase TERM 2310 2246754 - 2246721 - R 95 -6.1 -5.72622 | gap 1 CTTATAAATAAAAAA GCTGTCTACAATTCCA TTA TAGGA-TGCAGACAGC TTAACGATTACTATA rpmE2 2247024 - 2246770 - | 50S ribosomal protein L31 type B rho 2248458 - 2247142 - | transcription termination factor Rho TERM 2311 2248678 - 2248634 - R 84 -8.8 -4.32233 | opp_overlap 2248640, overlap 2248635 2248640 ATAAAAATTGCAAAA TTAAAACAGTACACAAAACT TAATT AGTCATGTGCACTGTTTTAT TGCGATTTTTAATTC TERM 2312 2248677 - 2248635 - R 100 -12.3 -3.17713 | opp_overlap 2248640, overlap 2248634 2248640 TAAAAATTGCAAAAT TAAAACAGTACACAAAACT TAATT AGTCATGTGCACTGTTTTA TTGCGATTTTTAATT TERM 2313 2248672 - 2248640 - R 83 -7.8 -4.67641 | opp_overlap 2248640, overlap 2248635 2248634 ATTGCAAAATTAAAA CAGTACACAAAACT TAATT AGTCATGTGCACTG TTTTATTGCGATTTT SAV2122 2250132 - 2248705 - | aldehyde dehydrogenase TERM 2314 2250339 - 2250291 - R 100 -9.8 -5.27938 | ATTTTTAAATAAAAA TAACTATTCCCACATCATCGCA AATAA TGCGAAGACTTAGAAATAGTTA TAATCAATGCTATGT SAV2123 2250708 - 2250370 - | hypothetical protein murZ 2252053 - 2250794 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 2315 2252467 - 2252442 - R 72 -2.6 -5.40625 | opp_overlap 2252442 ATACGACATAAAAAA GAAGCAAACA CCATTT TGTCTGTTTC TTTTAAAATTAATAT TERM 2316 2252526 - 2252508 - R 71 -4.7 -4.8143 | TTAATAACTTAAAAA CTAAATA TTAAT TATTTAG CGCGGTTTGAAGTAC fbaA 2253379 - 2252519 - | fructose-bisphosphate aldolase TERM 2317 2253001 - 2253032 + g 74 -5.3 -4.65916 | gap 1, opp_overlap 2253010 CACCTTTTTCATGAG CGTATTCAACAACT TTTTT AGTTGTTGC-TACG TTTTCTTCGAATGGG TERM 2318 2253222 - 2253204 - G 73 -7.4 -3.88137 | ACAATTGTGTAGAAA CCGCTCAT GTA ACGAGCAG CACCTTCAGAAACAC SAV2126 2253597 - 2254118 + | hypothetical protein TERM 2319 2254167 - 2254225 + T 85 -7.1 -4.93079 | gap 2, opp_overlap 2254178, overlap 2254178 ACATAATATTAAAAT TATAC-GA-AAAACCGGTACTTTCAATGT TTA ACAATGAAAGTACCGGTTTTATTAGCAAA TTTATTTATTTTGTT TERM 2320 2254212 - 2254178 - T 100 -18.8 -4.85177 | opp_overlap 2254178 2254167 AAATTATACGAAAAA CCGGTACTTTCAATGT TTA ACAATGAAAGTACCGG TTTTATTAGCAAATT TERM 2321 2254178 - 2254212 + T 100 -18.8 -4.64334 | opp_overlap 2254178, overlap 2254167 AAATTATACGAAAAA CCGGTACTTTCAATGT TTA ACAATGAAAGTACCGG TTTTATTAGCAAATT pyrG 2255837 - 2254227 - | CTP synthetase TERM 2322 2256092 - 2256061 - R 100 -12.4 -6.01187 | gap 1, opp_overlap 2256059 AATTAAATAAAAAAA CGCTCCCTCTCACAA ATT CTGTAAG-GGGAGCG TATAAATTTTATACA rpoE 2256703 - 2256173 - | DNA-directed RNA polymerase subunit delta SAV2129 2257675 - 2256815 - | spermine/spermidine acetyltransferase blt SAV2130 2258100 - 2258903 + | pantothenate kinase TERM 2323 2258904 - 2258960 + T 71 -5.6 -4.51378 | opp_overlap 2258909, overlap 2258909 2258911 TATTTAGGTAAATAG AAAAAGACCATTTATATGCGCG-TTGTT TTA AATAAACGC-TATATAAATGGCCTTTTA TTTTATGGTCTACGT TERM 2324 2258909 - 2258955 + T 81 -5.5 -5.20781 | opp_overlap 2258909, overlap 2258904 2258911 AGGTAAATAGAAAAA GACCATTTATATGCGCG-TTGTT TTA AATAAACGC-TATATAAATGGCC TTTTATTTTATGGTC TERM 2325 2258955 - 2258909 - T 81 -5.5 -5.20783 | opp_overlap 2258909 2258904 2258911 AGGTAAATAGAAAAA GACCATTTATAT-GCGCGTTGTT TTA AATAA-ACGCTATATAAATGGCC TTTTATTTTATGGTC SAV2131 2259705 - 2259034 - | hypothetical protein TERM 2326 2259967 - 2259931 - R 87 -8.1 -4.71426 | opp_overlap 2259931 CCTTTATCAACAAAA TGGCAACTCTTATAACA TAG TGAAATAAAAGTCGCCA TTTAATATTAGTATT TERM 2327 2260048 - 2260036 - R 75 -4.1 -5.1925 | CTAGAATCGAAAAAA GCTTG TTA CAAAC GCATATTCAGTCAAC SAV2132 2261297 - 2260104 - | hypothetical protein hmrA 2262481 - 2261297 - | HmrA luxS 2262792 - 2263262 + | S-ribosylhomocysteinase TERM 2328 2263336 - 2263286 - T 78 -10.6 -2.80398 | opp_overlap 2263291, overlap 2263291 CAATCAAGTTAATCA GAAAAGCAGTCGAACAATGATGTT ACA ATCGCCATTGTCCAACTGCTTTTT ATTATGCTTCAAAGT TERM 2329 2263331 - 2263291 - T 100 -10.5 -4.56093 | opp_overlap 2263291, overlap 2263286 AAGTTAATCAGAAAA GCAGTCGAACAATGATGTT ACA ATCGCCATTGTCCAACTGC TTTTTATTATGCTTC TERM 2330 2263291 - 2263331 + T 82 -6.1 -5.24416 | opp_overlap 2263291 2263286 AAGTTAATCAGAAAA GCAGTCGAACAATGATGTT ACA ATCGCCATTGTCCAACTGC TTTTTATTATGCTTC TERM 2331 2263407 - 2263351 - T 76 -9.9 -2.73441 | gap 1, opp_overlap 2263359, overlap 2263359 TATTATGCTTCAAAG TCAAA-AAATCGAACAAATGAAAAAG TAAAAT CTTTAACATTTGTCCGATTTATTTGA GAACCACTATAATTT TERM 2332 2263398 - 2263359 - T 86 -7.3 -5.22039 | opp_overlap 2263359, overlap 2263351 TTCAAAGTCAAAAAA TCGAACAAATGAAAAAG TAAAAT CTTTAACATTTGTCCGA TTTATTTGAGAACCA SAV2135 2263764 - 2263414 - | hypothetical protein TERM 2333 2263471 - 2263485 + g 85 -8.6 -4.16814 | opp_overlap 2263471 2263470 2263468 TAACCTTAAATATAG TTGCCA TGT TGGCAA TTGTTTATCTCCTAA pdp 2265079 - 2263778 - | pyrimidine-nucleoside phosphorylase SAV2137 2266020 - 2265358 - | deoxyribose-phosphate aldolase deoD 2266334 - 2267044 + | purine nucleoside phosphorylase TERM 2334 2267092 - 2267140 + T 76 -6.9 -4.36774 | gap 1, opp_overlap 2267097, overlap 2267097 AATGCGATTAAACTC AAAAAGCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGCTTTTA TTTATATTATTACTT TERM 2335 2267097 - 2267135 + T 83 -6.8 -5.11389 | gap 1, opp_overlap 2267097, overlap 2267092 GATTAAACTCAAAAA GCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGC TTTTATTTATATTAT TERM 2336 2267135 - 2267097 - T 80 -6.8 -4.82855 | gap 1, opp_overlap 2267097 2267092 GATTAAACTCAAAAA GCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGC TTTTATTTATATTAT dps 2267608 - 2267165 - | general stress protein 20U SAV2140 2268221 - 2267808 - | hypothetical protein TERM 2337 2268590 - 2268542 - R 85 -4.6 -5.50723 | opp_overlap 2268542 TTATTAAAATAAAAA CGAGCAATCTATCATAAGCTCT TAATT AGCTCTTATGGTTGATTACCCG TCATTTTTCTTTATG SAV2141 2270051 - 2268678 - | hypothetical protein TERM 2338 2269411 - 2269427 + g 72 -5.1 -4.76041 | ACTGTACTATTTGTT CTACCAG GAA TTGGTGG TTTTTCATGAATATG TERM 2339 2270162 - 2270177 + r 74 -7.6 -3.84712 | ATACCCTTTGTTCAC TGCGAT TTTA ATCGCA TTTCCTATAACATTG TERM 2340 2270629 - 2270602 - R 71 -3.4 -5.25906 | gap 1, opp_overlap 2270603, overlap 2270603 ATAAACCAACAAAAA CCCCCTCAC-TAC TAT GCAAGTGAGAGGT TATGTTGATGTGCTT SAV2142 2270953 - 2270723 - | hypothetical protein SAV2143 2271922 - 2270984 - | mannose-6 phosphate isomelase pmi TERM 2341 2272335 - 2272308 - R 89 -7 -5.42259 | overlap 2272290 2272311 TCATTTTCAAAAAAA TAACGAGTTACG AAAA CGTAACCCGCTT CAAATCATATTTACT TERM 2342 2272332 - 2272311 - R 100 -10.9 -4.79949 | overlap 2272290 2272308 TTTTCAAAAAAATAA CGAGTTACG AAAA CGTAACCCG CTTCAAATCATATTT SAV2144 2273023 - 2272358 - | hypothetical protein czrA 2273175 - 2273495 + | repressor protein czrB 2273497 - 2274474 + | cation-efflux system membrane protein TERM 2343 2274484 - 2274525 + F 100 -10.2 -5.51046 | opp_overlap 2274488 CATTAATAATTTTAA CCTACTGCCATTGCATCG ATTAAA CTTTTCAATGGCAGTAGG TTTTTTATGTCTTTA SAV2147 2274740 - 2275831 + | lytic regulatory protein truncated with Tn554 TERM 2344 2275873 - 2275834 - Tf 71 -7.8 -3.45762 | opp_overlap 2275838, overlap 2275823 2275833 2275835 TCAACCAAAATAAAT TTTGGAGCCCCTTACAAC TTTA GTTGTTAGGGGCTCTTAT GCATGCGCTTAGCGC TERM 2345 2275872 - 2275835 - Tf 85 -11.3 -2.66372 | opp_overlap 2275838, overlap 2275823 2275834 2275833 CAACCAAAATAAATT TTGGAGCCCCTTACAAC TTTA GTTGTTAGGGGCTCTTA TGCATGCGCTTAGCG TERM 2346 2275838 - 2275869 + TF 100 -17.4 -3.36803 | opp_overlap 2275835 2275834 2275833 CCAAAATAAATTTTG GAGCCCCTTACAAC TTTA GTTGTTAGGGGCTC TTATGCATGCGCTTA TERM 2347 2276182 - 2276157 - Tf 71 -3.3 -5.19879 | CTTGAAACACAAAAA GGGCAACAC TCGGAAAC ATGTTACCC TAATGAGCCCGTTAA SAV2149 2276983 - 2276801 - | hypothetical protein SAV2148 2276693 - 2276884 + | hypothetical protein SAV2150 2276885 - 2277055 + | hypothetical protein SAV2151 2277042 - 2277206 + | hypothetical protein TERM 2348 2277808 - 2277765 - T 81 -8.4 -4.10164 | gap 1, opp_overlap 2277766, overlap 2277766 2277768 TTACTAGCATACAAA GGAGCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGCTCT TTGTACATTACTCAT TERM 2349 2277766 - 2277807 + T 90 -9.7 -3.98826 | gap 1, opp_overlap 2277765 2277766 2277768 TACTAGCATACAAAG GAGCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGCTC TTTGTACATTACTCA TERM 2350 2277807 - 2277766 - T 93 -11.9 -3.05616 | gap 1, opp_overlap 2277766, overlap 2277765 2277768 TACTAGCATACAAAG GAGCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGCTC TTTGTACATTACTCA TERM 2351 2277805 - 2277768 - T 73 -8.7 -3.07876 | gap 1, opp_overlap 2277766, overlap 2277766 2277765 CTAGCATACAAAGGA GCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGC TCTTTGTACATTACT SAV2152 2278721 - 2277864 - | hypothetical protein SAV2153 2279571 - 2278789 - | ATP-binding protein TERM 2352 2279758 - 2279726 - R 100 -10 -5.09225 | AGTCGACCTAAAAAA GCACCCTTCTAG TCGATTAAT CTAAAAGGGTGC CATATACTTTAATTT glmS 2281608 - 2279803 - | D-fructose-6-phosphate amidotransferase TERM 2353 2282063 - 2282073 + H 76 -5.4 -5.08255 | TTAATCATTATTGTA CAAC GGT GTTG TTTTGTTTTGCAAAT TERM 2354 2282179 - 2282211 + G 79 -3.6 -5.4659 | TTGATGACACTTTAT TTAATTTTGTCACA TTTAT TTTGACAAAGTTGA TTTTTGTTTATATTG SAV2155 2282076 - 2282231 + | hypothetical protein mtlF 2282289 - 2283827 + | mannitol specific IIBC component of PTS system TERM 2355 2283862 - 2283848 - f 85 -5.6 -5.48163 | opp_overlap 2283846 2283848 AAATAAATTAAAAAA TGGAGG ATA CCGCCA TGTTATTGAGTACAC SAV2157 2283862 - 2285994 + | hypothetical protein mtlA 2286006 - 2286440 + | PTS system, mannitol specific IIA component mtlD 2286440 - 2287546 + | mannitol-1-phosphate 5-dehydrogenase TERM 2356 2287657 - 2287705 + T 78 -6.4 -4.7629 | opp_overlap 2287657 TCTGAACATAAAAAA TACTCCCTTCA-ACATAGACAC TTAACTT GTGT-TATGTATGAAAGGAGTA TTTTTGCGTTAATAA TERM 2357 2287705 - 2287657 - T 100 -8.6 -5.47159 | opp_overlap 2287657 TCTGAACATAAAAAA TACTCCCTTCA-ACATAGACAC TTAACTT GTGT-TATGTATGAAAGGAGTA TTTTTGCGTTAATAA fmtB(mrp) 2295310 - 2287865 - | FmtB protein TERM 2358 2288962 - 2288976 + g 75 -8.6 -3.50555 | overlap 2288958 GTTTATCCTTTGCAT CATCAG TTG CTGATG TTACTGTTGTTTCAC TERM 2359 2289302 - 2289323 + g 76 -4.3 -5.05712 | overlap 2289303 ACGTGCAATTTCTTT CGCCGATGC ATCT GCATCTGCA TTTTTAATTATTTCT TERM 2360 2289303 - 2289322 + g 71 -7.8 -3.60987 | overlap 2289302 CGTGCAATTTCTTTC GCCGATGC ATCT GCATCTGC ATTTTTAATTATTTC TERM 2361 2289365 - 2289377 + g 84 -6.3 -5.11063 | AACCACTTCTCTAAT TGCTT CCA AAGCA TTTTTCTTAACTACT TERM 2362 2290942 - 2290954 + g 72 -2.6 -5.24551 | TCGCATCTGCAGTTT GTGC AATAA GCGC TTTTTGTTCGTTTGC TERM 2363 2292016 - 2292033 + g 74 -3.3 -5.22039 | opp_overlap 2292006, overlap 2292017 2292018 AATGAGCTGCATCTA TTGCTGC ATCA GCAGCCG TTTTTTCAGTTTGAA TERM 2364 2295578 - 2295541 - R 100 -12.9 -3.88559 | opp_overlap 2295550 2295551, overlap 2295543 2295551 AATTATTTCTAGAAA CACAAAAAAACCGATGC ATAC GCATCGGCTTATTTGTA ATACAGTATTTATTT TERM 2365 2295576 - 2295543 - R 100 -13.3 -3.52906 | opp_overlap 2295550 2295551, overlap 2295541 2295551 TTATTTCTAGAAACA CAAAAAAACCGATGC ATAC GCATCGGCTTATTTG TAATACAGTATTTAT TERM 2366 2295550 - 2295569 + r 77 -7.8 -4.11183 | opp_overlap 2295543 2295541 2295551, overlap 2295551 TAGAAACACAAAAAA ACCGATGC ATAC GCATCGGC TTATTTGTAATACAG TERM 2367 2295551 - 2295568 + r 91 -11.3 -3.06228 | opp_overlap 2295543 2295541 2295551, overlap 2295550 AGAAACACAAAAAAA CCGATGC ATAC GCATCGG CTTATTTGTAATACA TERM 2368 2295568 - 2295551 - R 100 -11.3 -5.90231 | opp_overlap 2295551 2295550, overlap 2295543 2295541 AGAAACACAAAAAAA CCGATGC ATAC GCATCGG CTTATTTGTAATACA glmM(femD) 2296943 - 2295588 - | phosphoglucosamine-mutase TERM 2369 2296112 - 2296122 + g 70 -4 -4.95896 | CAATCATGTCATTAT TCAA TTC TTGA TTTTTATGCATTTCT SAV2162 2297902 - 2296970 - | hypothetical protein TERM 2370 2297682 - 2297716 + g 72 -5 -4.67982 | overlap 2297684 ATTATCTTTGATTGT GGTCCTGAAATAGTCA CAT TAACTGTTTCAGGCGC TTTTGTTAAATGCAA SAV2163 2298713 - 2297904 - | hypothetical protein TERM 2371 2298815 - 2298805 - R 76 -2.6 -5.56264 | TTTAAATAGAAAAAA TTTA TTT TAAA GATTATAACTACTCT TERM 2372 2298890 - 2298856 - R 90 -7.3 -5.64006 | overlap 2298879 AGTGAATTAAAAAAA GTAGTGCAAAAAGCA AAATA TACTTTATACACTAC AAATCATTTATTTAT arg 2299810 - 2298902 - | arginase TERM 2373 2299941 - 2299918 - R 100 -11.8 -5.94713 | ACTTCATAAAAAAAA GCACTTCCCA AAAA TGGAAAGTGC AAGTAGTGAGCCATA TERM 2374 2300383 - 2300370 - R 70 -8.1 -3.14881 | TAACCGCTTGACCAA GGAGC CATG GCTCC ACAGGTAGGACTCGA TERM 2375 2303277 - 2303296 + r 90 -10.8 -3.66803 | opp_overlap 2303276 2303275 GAGTGTCCTACAACC CCAACAAG CAAG CTTGTTGG TTTGGGCTCTTCCCG TERM 2376 2303653 - 2303680 + r 70 -5.6 -4.28115 | AACGCGTTATTAATC TTGTGAGTGTTC TTTC GAACACTAGCGA TTATTTCTTATGAAT TERM 2377 2303979 - 2303952 - R 73 -3.7 -5.27477 | gap 1, overlap 2303954 2303971 2303973 ACTTTAACCAAAAAA TATTTGAATGTT AAATA AACATTCAAA-A CTGAATACAATATGT TERM 2378 2303978 - 2303954 - R 84 -8.8 -4.26777 | overlap 2303952 2303971 2303973 TTTAACCAAAAAATA TTTGAATGTT AAATA AACATTCAAA ACTGAATACAATATG TERM 2379 2304959 - 2304977 + r 71 -8.8 -2.75963 | overlap 2304958 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT TERM 2380 2305390 - 2305411 + r 83 -10.3 -3.25079 | overlap 2305388 AAGACCGTCTTTCAC TTTTGAACC ATGC GGTTCAAAA TATTATCCGGTATTA TERM 2381 2305636 - 2305652 + r 79 -5.9 -5.09426 | overlap 2305637 ATACTAAATAATGTT TGTAACT TAT AGTTACG TTTTTTGGAATTAAC TERM 2382 2305848 - 2305862 + r 70 -6.4 -4.08571 | opp_overlap 2305841, overlap 2305831 TTTAAAAACAACTGC GTCGTT TTT GACGAC TTTATCATATTATCA TERM 2383 2306007 - 2306033 + r 83 -9.6 -3.67285 | opp_overlap 2306007 AAATCAACATAAAAA CGTACAAAATAA AAG TAATTTTGTACG TTTAGCATATATTAT TERM 2384 2306033 - 2306007 - R 100 -9.6 -5.16206 | opp_overlap 2306007 AAATCAACATAAAAA CGTACAAAATAA AAG TAATTTTGTACG TTTAGCATATATTAT SAV2165 2307115 - 2306051 - | ATP-binding protein Mrp-like protein TERM 2385 2306750 - 2306719 - G 70 -8.2 -3.19668 | gap 1, opp_overlap 2306727, overlap 2306727 CACGAGCTAAGGCAA CGGCTAAATTTACTG CAA CAGTAGATTTA-CCG ACACCACCTTTACCG TERM 2386 2307252 - 2307219 - R 100 -7.6 -5.99154 | TATTAAATAAAAAAA GCAGTTAGCCTATT ATTTTA AATAGACCAACTAC TATAATTATTTTAAA SAV2166 2308705 - 2307263 - | multidrug resistance protein TERM 2387 2307722 - 2307710 - G 71 -7.7 -3.6363 | opp_overlap 2307710 ACCAGTATAAATCAA TGGTC TAG GACCA TACTTATCATAAAAT TERM 2388 2308413 - 2308399 - G 74 -6.4 -4.4261 | GTGCTAACATTAAAA CTCCAA AAT TCGGAG CTAAGGCTGCAACAA TERM 2389 2309021 - 2308991 - R 90 -7.7 -5.10461 | gap 1 TCTATTGAACAAAAA GAAGTTG-GAACAC ATAT GTGCCCTCAACTTC AGATATCTATTTTCT SAV2167 2309501 - 2309028 - | hypothetical protein TERM 2390 2309380 - 2309366 - G 77 -5.8 -4.72188 | CCAACCTAAAATAAA TAAGTA TTC TACTTA ATCCATATAAACCAA SAV2168 2310073 - 2309600 - | putative multidrug transporter SAV2169 2310723 - 2310085 - | multidrug ABC transporter TERM 2391 2310883 - 2310871 - R 83 -3.3 -5.8187 | overlap 2310872 2310873 TATGTAATAAAAAAA GCGGA GTT TCCCC CAGCTTTTCTAAACG SAV2170 2311586 - 2310900 - | hemolysin III SAV2171 2312789 - 2311602 - | UDP-N-acetylglucosamine pyrophosphorylase SAV2172 2313348 - 2312833 - | hypothetical protein TERM 2392 2313321 - 2313335 + g 85 -8.6 -4.2535 | CTCCAACGAGCATGC CACATG AAG CATGTG TTTTACCTGTCATAT SAV2173 2313525 - 2313785 + | hypothetical protein TERM 2393 2313846 - 2313800 - T 95 -7.6 -5.63504 | opp_overlap 2313807, overlap 2313787 2313802 2313807 AATTGTATAAAAAAA TACAAAAGGACAACTGTT CTCATAATTTT AACAGTTGTCCTTTTTCA CATATATTTATAACA TERM 2394 2313844 - 2313802 - T 82 -8 -4.45201 | opp_overlap 2313807, overlap 2313787 2313800 2313807 TTGTATAAAAAAATA CAAAAGGACAACTGTT CTCATAATTTT AACAGTTGTCCTTTTT CACATATATTTATAA TERM 2395 2313807 - 2313839 + T 83 -7.9 -4.6644 | opp_overlap 2313802 2313800 2313807 TAAAAAAATACAAAA GGACAACTGTT CTCATAATTTT AACAGTTGTCC TTTTTCACATATATT TERM 2396 2313839 - 2313807 - T 90 -7.9 -5.11475 | opp_overlap 2313807, overlap 2313802 2313800 TAAAAAAATACAAAA GGACAACTGTT CTCATAATTTT AACAGTTGTCC TTTTTCACATATATT TERM 2397 2313875 - 2313865 - T 72 -5.4 -4.79955 | ATATTTATAACAAAA GATG TGC CATC AAAGAAATAATTGGT SAV2174 2315224 - 2313854 - | hypothetical protein TERM 2398 2314091 - 2314075 - G 73 -7.3 -4.00465 | opp_overlap 2314087, overlap 2314087 TAGAAGGTAAAAACA TATCGGC AAA ACCGATA ATAATCGTTTGAGAA TERM 2399 2315054 - 2315042 - G 77 -5.5 -4.93365 | overlap 2315044 CGTCACAATTAAAAA TGGCA TTA CGCCA CCTAATACATCTTTA TERM 2400 2315433 - 2315401 - R 86 -7.2 -5.17576 | opp_overlap 2315401 GATGAATTCAAAAAA GGTTAAGTACAA TTACTGATT TCGTACTTAACC TTTTTTAAACTCTAA TERM 2401 2315401 - 2315433 + r 79 -5.8 -5.07567 | gap 1, opp_overlap 2315401 GATGAATTCAAAAAA GGTTAAGTAC-AATT ACTG ATTTCGTACTTAACC TTTTTTAAACTCTAA htsC 2316428 - 2315460 - | heme transport system permease htsB 2317456 - 2316425 - | heme transport system permease TERM 2402 2316972 - 2316954 - G 79 -5.2 -5.0917 | CTACTAAAAAACAAA TGGATGGC CAT ACCAGCCA ATGCTAATTTAATGG TERM 2403 2317367 - 2317404 + g 74 -2.1 -5.56263 | gap 1, opp_overlap 2317370, overlap 2317369 2317370 TATACAAATAAAAAG AAAGCACAA-ACTCAC TATATAC GTGAGTGTTGTGCGTC TTTTTCTTTTATGAT TERM 2404 2317401 - 2317370 - G 90 -8.2 -5.1502 | gap 1, opp_overlap 2317369 2317367 2317370 ACAAATAAAAAGAAA GCACAA-ACTCAC TATATAC GTGAGTGTTGTGC GTCTTTTTCTTTTAT TERM 2405 2317370 - 2317401 + g 70 -8.2 -3.21407 | gap 1, opp_overlap 2317370, overlap 2317369 2317367 ACAAATAAAAAGAAA GCACAA-ACTCAC TATATAC GTGAGTGTTGTGC GTCTTTTTCTTTTAT htsA 2318451 - 2317468 - | heme transport system lipoprotein SAV2178 2319913 - 2318843 - | hypothetical protein SAV2179 2321677 - 2319920 - | hypothetical protein TERM 2406 2321310 - 2321322 + g 71 -6.3 -4.08872 | TGACTTATTAATGTT TGTCT GTG AGACA TTTGCTTATATGTTT SAV2180 2322857 - 2321664 - | transporter TERM 2407 2322367 - 2322356 - G 70 -4.4 -4.72617 | CGATAAAATAACAAA TTGC CTGT GCAA GAAATGTTGTTGGCG SAV2181 2322959 - 2324935 + | hypothetical protein TERM 2408 2325090 - 2325043 - T 100 -13.1 -4.84363 | gap 1, opp_overlap 2325053 2325084, overlap 2325053 TCAAATTATTAAAAA TC-ACAAAAAAGCTCGGCAC TAAAATGGT GTGCCGAGCTTTTTTATCGA ATAACTTATTGTAAA TERM 2409 2325053 - 2325079 + T 100 -10.9 -5.26316 | opp_overlap 2325043 2325053 AAAAATCACAAAAAA GCTCGGCAC TAAAATGGT GTGCCGAGC TTTTTTATCGAATAA TERM 2410 2325079 - 2325053 - T 100 -10.9 -5.47914 | opp_overlap 2325053, overlap 2325043 AAAAATCACAAAAAA GCTCGGCAC TAAAATGGT GTGCCGAGC TTTTTTATCGAATAA asp23 2325605 - 2325096 - | alkaline shock protein 23 SAV2183 2325907 - 2325668 - | hypothetical protein SAV2184 2326456 - 2325920 - | hypothetical protein TERM 2411 2326507 - 2326495 - R 71 -4.9 -4.75776 | AAGTTAATTTAAAAA CATAT TAA ATATG TACCCATCAGTTTTT SAV2185 2328193 - 2326631 - | glycine betaine transporter opuD-like protein TERM 2412 2328490 - 2328451 - R 100 -12.3 -5.4251 | opp_overlap 2328454, overlap 2328454 GCTAGACACAAAAAA TAAGTCGCCCTATACAG TATTTT CTGCATAAGGCGACTTT ACTTACTAATCTATA TERM 2413 2328487 - 2328454 - R 100 -14 -4.78477 | opp_overlap 2328454, overlap 2328451 AGACACAAAAAATAA GTCGCCCTATACAG TATTTT CTGCATAAGGCGAC TTTACTTACTAATCT TERM 2414 2328454 - 2328487 + r 90 -9.6 -3.97444 | opp_overlap 2328454 2328451 AGACACAAAAAATAA GTCGCCCTATACAG TATTTT CTGCATAAGGCGAC TTTACTTACTAATCT TERM 2415 2328524 - 2328536 + r 76 -6.3 -4.58283 | overlap 2328528 2328534 TAATTACTAATTTCC CAATC ATT GATTG TTTTTCCAACAATTG SAV2186 2329508 - 2328501 - | alginate lyase TERM 2416 2328713 - 2328727 + g 73 -3.6 -5.1166 | CAAACATAAATTCAT GTGTAA ATG TTATAC TTTTTAATTTTAATG SAV2187 2330744 - 2329743 - | quinone oxidoreductase SAV2188 2331891 - 2331022 - | hypothetical protein TERM 2417 2332141 - 2332115 - R 81 -7.3 -4.55295 | opp_overlap 2332115 2332117 CTTTCTATAAATAAA GACCTACCAGC ACTCG ACTGATAGGCC TTTTAATATCTATAA lacG 2333569 - 2332157 - | 6-phospho-beta-galactosidase lacE 2335299 - 2333587 - | PTS system, lactose-specific IIBC component lacF 2335616 - 2335305 - | PTS system, lactose-specific IIA component lacD 2336618 - 2335638 - | tagatose 1,6-diphosphate aldolase lacC 2337554 - 2336622 - | tagatose-6-phosphate kinase lacB 2338082 - 2337567 - | galactose-6-phosphate isomerase subunit LacB TERM 2418 2337615 - 2337643 + g 78 -7.5 -4.10791 | opp_overlap 2337615 2337619 TAAGAATTCATCAAA GAAATGTGGATCA GCT TGATCTGCATTGC TTGTTTCTAAATGTT lacA 2338526 - 2338098 - | galactose-6-phosphate isomerase subunit LacA TERM 2419 2338434 - 2338478 + g 89 -9 -4.29953 | gap 1, opp_overlap 2338442 2338444, overlap 2338431 CTGTCCTTCTGTTAC GTCAACAACATCATATTTATT GTCT AATAAGTATGAT-TTGATGAC TTCTTTTAATCGTTT TERM 2420 2338695 - 2338645 - R 70 -6.4 -4.13654 | overlap 2338662 CGTTTAAATTATAAA CATAAACAAACAATAAATCAACAT AAT ATGTTTATAACCTGTTTGTTTATG ACATATTTTCAAACA TERM 2421 2338855 - 2338813 - R 76 -3.7 -5.4477 | gap 1, opp_overlap 2338824, overlap 2338816 AAATTTGCAAAAAAA TA-ACCCATAAATGAATGCA AATT CACATTCACTTATGAGCATA TAGATACATATTTTA TERM 2422 2338851 - 2338816 - R 100 -9.2 -4.79949 | opp_overlap 2338824, overlap 2338813 TTTGCAAAAAAATAA CCCATAAATGAATGCA AATT CACATTCACTTATGAG CATATAGATACATAT lacR 2339648 - 2338893 - | lactose phosphotransferase system repressor SAV2197 2339899 - 2340630 + | NAD-dependent deacetylase TERM 2423 2340639 - 2340676 + F 79 -7.9 -4.20354 | opp_overlap 2340645, overlap 2340645 AGAGTAATCAGTAGG TAAAAAGCATTTCCC GAGTAACA GGGAGATGCTTTTAA TTTTGGAGTTGCGTT TERM 2424 2340645 - 2340670 + F 78 -6.9 -4.67641 | opp_overlap 2340645, overlap 2340639 ATCAGTAGGTAAAAA GCATTTCCC GAGTAACA GGGAGATGC TTTTAATTTTGGAGT TERM 2425 2340670 - 2340645 - f 71 -4.7 -4.68994 | opp_overlap 2340645 2340639 ATCAGTAGGTAAAAA GCATTTCCC GAGTAACA GGGAGATGC TTTTAATTTTGGAGT SAV2198 2340679 - 2340828 + | hypothetical protein SAV2199 2341118 - 2340915 - | hypothetical protein TERM 2426 2341315 - 2341276 - R 72 -5.1 -4.78753 | TTAAGAGTAATAAAA TAACCTGCAACATAGAC TTTAAC ATCCAAGTTTCAGGTTA GCGTAATGTAAATTA SAV2200 2342199 - 2341351 - | oxidoreductase, aldo/keto reductase SAV2201 2342685 - 2342269 - | transcription regulators (MerR family protein) homolog TERM 2427 2342890 - 2342906 + H 76 -5.3 -5.11112 | opp_overlap 2342888 2342893, overlap 2342888 AAGATTGATAATATT TAATTTT TTA AAAATTA TTTTTGTTGCAATTT TERM 2428 2343474 - 2343463 - g 74 -5.8 -4.4727 | GTAATATTGAGAAAA TCGC AGAA GCGA TGAGGCATCCTAAAA TERM 2429 2344896 - 2344886 - g 71 -6.8 -4.24963 | overlap 2344876 TACAACGATTGAAAA TCGC AAA GCGA ATGGGTATACGTTAT hysA 2343093 - 2345522 + | hyaluronate lyase precursor TERM 2430 2345569 - 2345527 - T 100 -13.8 -3.65446 | opp_overlap 2345532 2345557, overlap 2345532 TAACTAAATAAGCAA GAAAATCTCGACACTATA CCATTTT TATAGTGTCGAGATTTTA TAAGTATCGCCATCA TERM 2431 2345532 - 2345564 + T 100 -13.7 -4.45083 | opp_overlap 2345532 2345527, overlap 2345557 AAATAAGCAAGAAAA TCTCGACACTATA CCATTTT TATAGTGTCGAGA TTTTATAAGTATCGC TERM 2432 2345564 - 2345532 - T 100 -13.7 -4.85618 | opp_overlap 2345532 2345557, overlap 2345527 AAATAAGCAAGAAAA TCTCGACACTATA CCATTTT TATAGTGTCGAGA TTTTATAAGTATCGC SAV2203 2346436 - 2345582 - | hypothetical protein SAV2204 2347462 - 2346647 - | hypothetical protein SAV2205 2347757 - 2348182 + | hypothetical protein TERM 2433 2348211 - 2348237 + T 75 -5.9 -4.80882 | AAAATAGTTACACAG GGCAAACGC TGAAAAATT GCGTTTGTC TTTTTAGTATGAAAT TERM 2434 2348431 - 2348395 - T 100 -16.9 -3.17901 | opp_overlap 2348395 2348399, overlap 2348399 ATATCTGGAACCTAA TAAATCCCCTCACTACT GCT AATAGTGAAGGGATTTA TTTTATTACTTAGAC TERM 2435 2348395 - 2348431 + T 100 -12.5 -4.78572 | opp_overlap 2348395 2348399, overlap 2348399 ATATCTGGAACCTAA TAAATCCCCTCACTACT GCT AATAGTGAAGGGATTTA TTTTATTACTTAGAC TERM 2436 2348427 - 2348399 - T 100 -13.3 -4.2528 | opp_overlap 2348395 2348399, overlap 2348395 CTGGAACCTAATAAA TCCCCTCACTACT GCT AATAGTGAAGGGA TTTATTTTATTACTT TERM 2437 2348399 - 2348427 + T 93 -8.9 -4.91657 | opp_overlap 2348399 2348395, overlap 2348395 CTGGAACCTAATAAA TCCCCTCACTACT GCT AATAGTGAAGGGA TTTATTTTATTACTT SAV2206 2349270 - 2348566 - | alpha-acetolactate decarboxylase alsS 2350971 - 2349307 - | acetolactate synthase SAV2208 2351323 - 2351493 + | hypothetical protein TERM 2438 2351935 - 2351967 + T 75 -9.3 -3.02471 | opp_overlap 2351940, overlap 2351940 CCCACACAAACGCAA AAAAACACCTCGA CATAACA TCGAGGTGTTTTG TATATATCGTCCGAC TERM 2439 2351962 - 2351940 - T 100 -10.6 -5.59564 | opp_overlap 2351935 2351940 ACAAACGCAAAAAAA CACCTCGACA TAA CATCGAGGTG TTTTGTATATATCGT TERM 2440 2351940 - 2351962 + T 100 -9.2 -4.65446 | opp_overlap 2351940, overlap 2351935 ACAAACGCAAAAAAA CACCTCGA CATAACA TCGAGGTG TTTTGTATATATCGT SAV2209 2353237 - 2352221 - | hypothetical protein TERM 2441 2353294 - 2353348 + r 79 -9.1 -3.48593 | gap 1, opp_overlap 2353297 2353302, overlap 2353312 ACCATCTTCTTTTAA TTATT-ACATTATTTAGTCGTTAGGG GCCC CCCTAACTATTAAATAATATAAATAA TTATCTCAAAAAATG TERM 2442 2353344 - 2353297 - R 100 -12.4 -2.71011 | opp_overlap 2353294 2353312, overlap 2353302 ATCTTCTTTTAATTA TTACATTATTTAGTCGTTAGGG GCCC CCCTAACTATTAAATAATATAA ATAATTATCTCAAAA TERM 2443 2353339 - 2353302 - R 76 -10.1 -2.86164 | opp_overlap 2353294 2353312, overlap 2353297 CTTTTAATTATTACA TTATTTAGTCGTTAGGG GCCC CCCTAACTATTAAATAA TATAAATAATTATCT TERM 2444 2353312 - 2353329 + r 78 -9.9 -3.11768 | opp_overlap 2353302 2353297, overlap 2353294 TTACATTATTTAGTC GTTAGGG GCCC CCCTAAC TATTAAATAATATAA TERM 2445 2353387 - 2353421 + r 76 -9.6 -2.63823 | opp_overlap 2353383 2353380 2353398, overlap 2353383 2353392 2353398 AATTAAAATAATTAT TTATAGTAAAATTTTC GAA GAAAAATTTACTGTAA TCAATTGTATACCTT SAV2210 2354147 - 2353482 - | hypothetical protein SAV2211 2354758 - 2354111 - | hypothetical protein TERM 2446 2354679 - 2354692 + gr 77 -5.3 -4.93079 | AAATTTTTTATATAC TCATC ATTA GATGA TTTATTTATTTTATT SAV2212 2356332 - 2356009 - | hypothetical protein SAV2213 2356868 - 2356713 - | hypothetical protein TERM 2447 2356757 - 2356793 + g 78 -10.4 -2.77088 | gap 1, opp_overlap 2356765, overlap 2356756 2356765 GAACTTCAACTGTTT TCCCA-CAATATTCAGC TGAT GCTGAATATTGATTGGA CTTATATGTAATCAT TERM 2448 2356765 - 2356784 + g 79 -9.4 -3.38326 | opp_overlap 2356765, overlap 2356757 2356756 ACTGTTTTCCCACAA TATTCAGC TGAT GCTGAATA TTGATTGGACTTATA TERM 2449 2356784 - 2356765 - G 77 -9.4 -3.28791 | opp_overlap 2356757 2356756 2356765 ACTGTTTTCCCACAA TATTCAGC TGAT GCTGAATA TTGATTGGACTTATA TERM 2450 2356855 - 2356890 + g 82 -3.4 -5.69262 | opp_overlap 2356854, overlap 2356856 TTCACTTTATATGAG TTTCTTACATTCAC ATTCGGTA GTGATTGTAAGAAC TTTTTCTTTTTCTAA TERM 2451 2356856 - 2356889 + g 73 -6.9 -3.99117 | opp_overlap 2356854, overlap 2356855 TCACTTTATATGAGT TTCTTACATTCAC ATTCGGTA GTGATTGTAAGAA CTTTTTCTTTTTCTA SAV2214 2357010 - 2356846 - | hypothetical protein SAV2215 2357359 - 2357033 - | hypothetical protein SAV2216 2358204 - 2359151 + | hypothetical protein TERM 2452 2359215 - 2359183 - T 100 -11.5 -5.75538 | opp_overlap 2359181 TCCAAAAAATAAAAA GGAAGTTAAGCAA TGTTTAG TTGCCTAACTTCC GATATTGAATGCATC TERM 2453 2359279 - 2359311 + T 83 -10.7 -3.02471 | opp_overlap 2359284, overlap 2359284 AACACACAAACGCAA AAAAACACCTCGACA TAA TATCGAGGTGTTTTG TATATATCGTCCGAC TERM 2454 2359284 - 2359306 + T 100 -10.6 -4.65446 | opp_overlap 2359284, overlap 2359279 ACAAACGCAAAAAAA CACCTCGACA TAA TATCGAGGTG TTTTGTATATATCGT TERM 2455 2359306 - 2359284 - T 100 -12.8 -5.59564 | opp_overlap 2359279 2359284 ACAAACGCAAAAAAA CACCTCGACA TAA TATCGAGGTG TTTTGTATATATCGT rpsI 2359721 - 2359329 - | 30S ribosomal protein S9 TERM 2456 2359619 - 2359641 + g 77 -9.2 -3.18452 | GTAAGTATTCGCGTA CGTCACGGTT ATT AACTGTGATG TTACCTTCACCTGGT rplM 2360178 - 2359741 - | 50S ribosomal protein L13 TERM 2457 2360422 - 2360435 + r 70 -3.9 -5.08169 | GTCAATGGCAATCAG TCATT TTGT AATGA TTTTTTGCGATGTAT truA 2361221 - 2360418 - | tRNA pseudouridine synthase A SAV2220 2362032 - 2361226 - | cobalt ABC transporter permease TERM 2458 2361937 - 2361925 - G 71 -3.5 -5.04175 | TGAATGACAGAAAAA TATTA ATA TAATA AAAAGAAAAACAAAC SAV2221 2362882 - 2362022 - | cobalt transporter ATP-binding subunit SAV2222 2363688 - 2362879 - | cobalt transporter ATP-binding subunit TERM 2459 2363339 - 2363356 + g 71 -6.3 -4.13945 | CTTCTATGCATTTCG TCATGTG GAAC CGCATGA TTTTCGAGTCCAAAT TERM 2460 2363627 - 2363607 - G 83 -6.9 -4.75288 | opp_overlap 2363605 2363613 2363618 GTATATTAAAAGAAA CATCTTTCA ATG TGAAGGATG CATCACTTTGATATT TERM 2461 2364057 - 2364016 - R 100 -12.5 -4.19927 | opp_overlap 2364016, overlap 2364020 AAAAGTAGATATAAA GAAATCGGACTTAAAAACA TTTC TGTTCATAAGTCCGATATC TTATTCAATAAAAAA TERM 2462 2364016 - 2364057 + r 85 -10.3 -3.67597 | opp_overlap 2364016 2364020 AAAAGTAGATATAAA GAAATCGGACTTAAAAACA TTTC TGTTCATAAGTCCGATATC TTATTCAATAAAAAA TERM 2463 2364053 - 2364020 - R 100 -11.9 -4.65722 | opp_overlap 2364016, overlap 2364016 GTAGATATAAAGAAA TCGGACTTAAAAACA TTTC TGTTCATAAGTCCGA TATCTTATTCAATAA rplQ 2364594 - 2364226 - | 50S ribosomal protein L17 rpoA 2365555 - 2364611 - | DNA-directed RNA polymerase subunit alpha rpsK 2366019 - 2365630 - | 30S ribosomal protein S11 TERM 2464 2365743 - 2365757 + g 76 -10 -2.86618 | overlap 2365745 2365748 GAATAGCTGATTCAC GACCTG GAC CAGGTC CTTTAACTGTTACTT TERM 2465 2365824 - 2365842 + g 73 -8.2 -3.54575 | opp_overlap 2365824 2365823, overlap 2365822 2365817 ATGCAGTTTCAGAAG CCATTTGT GCT GCAAATGG TGTTGATTTTTTAGA rpsM 2366408 - 2366043 - | 30S ribosomal protein S13 TERM 2466 2366301 - 2366311 + g 73 -4 -5.03145 | AGCTGATACGTTAGC TTCT TCA AGAA TTTTTTGAGCAGTTG rpmJ 2366544 - 2366431 - | 50S ribosomal protein L36 infA 2366794 - 2366576 - | translation initiation factor IF-1 adk 2367634 - 2366987 - | adenylate kinase secY 2368943 - 2367651 - | preprotein translocase subunit SecY TERM 2467 2368469 - 2368459 - G 74 -6.8 -4.29508 | overlap 2368455 AGCCATATTAAGAAA GCAG TTC CTGC TGTCAAAACTAGTGC TERM 2468 2368591 - 2368617 + g 74 -6.7 -4.33819 | opp_overlap 2368590 2368591 2368597, overlap 2368593 AATGCTAAAGAAATT GCTAAATAACG AGTAA CGTTATTTAAC TTTCTTCTACCTACT TERM 2469 2368838 - 2368816 - G 81 -7.7 -4.30576 | opp_overlap 2368816 2368831 TGGGGATTATCAAAA GCTGCAGGA TTTAC TCCTGGAGC TGGTATATAAGTCCC rplO 2369383 - 2368943 - | 50S ribosomal protein L15 rpmD 2369579 - 2369400 - | 50S ribosomal protein L30 rpsE 2370096 - 2369596 - | 30S ribosomal protein S5 TERM 2470 2369897 - 2369910 + g 76 -3.8 -5.32565 | ACTAAATCTTTTTTA GCTG CTTCAA CAGC TTTTTTGATTGCTTC rplR 2370476 - 2370117 - | 50S ribosomal protein L18 rplF 2371043 - 2370507 - | 50S ribosomal protein L6 rpsH 2371466 - 2371068 - | 30S ribosomal protein S8 rpsN 2371683 - 2371498 - | 30S ribosomal protein S14 rplE 2372245 - 2371706 - | 50S ribosomal protein L5 rplX 2372589 - 2372272 - | 50S ribosomal protein L24 TERM 2471 2372507 - 2372529 + g 76 -7.8 -4.06633 | ACACGGTCTTTTTTA GGTAGAGTAG CAA TTACTTTACC TTCTTTACCTTTGTC rplN 2372993 - 2372625 - | 50S ribosomal protein L14 rpsQ 2373288 - 2373025 - | 30S ribosomal protein S17 rpmC 2373521 - 2373312 - | 50S ribosomal protein L29 TERM 2472 2373386 - 2373403 + g 81 -7.7 -4.3953 | CAATCGTTTTTCTTA CTGTACG AATA CGTGCAG TTTCTTCTAATTGAC rplP 2373945 - 2373511 - | 50S ribosomal protein L16 rpsC 2374601 - 2373948 - | 30S ribosomal protein S3 rplV 2374978 - 2374625 - | 50S ribosomal protein L22 rpsS 2375285 - 2375007 - | 30S ribosomal protein S19 TERM 2473 2375301 - 2375342 + r 74 -8.1 -3.59079 | gap 1 TTGGGCGCCTCCCTT CTTATTATGTGCGTGCAGCT TTA AGCCGCACACCCA-AATAAG TTGATTATATTATTT rplB 2376185 - 2375352 - | 50S ribosomal protein L2 rplW 2376493 - 2376218 - | 50S ribosomal protein L23 rplD 2377116 - 2376493 - | 50S ribosomal protein L4 rplC 2377805 - 2377143 - | 50S ribosomal protein L3 TERM 2474 2377558 - 2377568 + g 84 -6.8 -5.0538 | ATGAAGCGCTTAGGT GCTG CGT CAGC TTTTTTAGCGTGACC rpsJ 2378141 - 2377833 - | 30S ribosomal protein S10 SAV2252 2378498 - 2378887 + | hypothetical protein TERM 2475 2379061 - 2379039 - T 100 -12.8 -5.64421 | opp_overlap 2379039 ACTTCAAAGAAAAAA CGACTACCAA TCA TTGGCAGTCG TTTTTTGTGTCTGGA TERM 2476 2379039 - 2379061 + T 100 -10.6 -5.4251 | opp_overlap 2379039 ACTTCAAAGAAAAAA CGACTACCAA TCA TTGGCAGTCG TTTTTTGTGTCTGGA SAV2253 2380412 - 2379078 - | xanthine/uracil permease family protein TERM 2477 2380484 - 2380494 + r 74 -5.4 -4.98255 | opp_overlap 2380477 2380484 AAACAATACCAAAAG CGAA CTT TTCG TTTTTCTGATTCAAC topB 2382660 - 2380525 - | DNA topoisomerase III TERM 2478 2382265 - 2382289 + g 77 -5 -5.06816 | opp_overlap 2382265 2382270 TTTTTTAGTAACTGA GCTAATCCAT AATCG ACGGATTGGC TTTTTGTTACCAACT SAV2255 2382745 - 2383722 + | hypothetical protein TERM 2479 2383739 - 2383769 + F 81 -6.2 -5.1286 | opp_overlap 2383739 ATACCAAGCAAATAC CCCACAGTACTT CATTAGC ATGTATTGTGGG TTTTTCTACTTTTTG SAV2256 2383903 - 2384766 + | glucose uptake protein TERM 2480 2385103 - 2385126 + G 71 -6.8 -4.15222 | opp_overlap 2385109, overlap 2385105 2385109 AACTTGCATTGTCTG TAGAAATTGG GAAT CCAATTTCTC TTTGTTGGGGCCCCT TERM 2481 2385105 - 2385124 + G 80 -9.4 -3.6761 | opp_overlap 2385109, overlap 2385103 2385109 CTTGCATTGTCTGTA GAAATTGG GAAT CCAATTTC TCTTTGTTGGGGCCC SAV2257 2385050 - 2385169 + | hypothetical protein TERM 2482 2385165 - 2385181 + T 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 2483 2385229 - 2385217 - T 90 -7.7 -5.1925 | opp_overlap 2385216 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT TERM 2484 2385376 - 2385322 - T 100 -11.7 -3.91032 | gap 1, opp_overlap 2385322 2385325 2385327, overlap 2385327 CAACTATGTCATAAA TAAAAGCCCCCTTT-TCACAATATGC ATTT ACATGTTGTGGTAAAGGGGGCTCTCA TTTTCTACGAATACT TERM 2485 2385322 - 2385376 + T 100 -11 -4.3898 | gap 1, opp_overlap 2385322 2385327, overlap 2385325 2385327 CAACTATGTCATAAA TAAAAGCCCCCTTT-TCACAATATG CATTTA CATGTTGTGGTAAAGGGGGCTCTCA TTTTCTACGAATACT TERM 2486 2385325 - 2385373 + T 100 -12.7 -3.17598 | gap 1, opp_overlap 2385322 2385327, overlap 2385322 2385327 CTATGTCATAAATAA AAGCCCCCTTT-TCACAATATG CATTTA CATGTTGTGGTAAAGGGGGCTC TCATTTTCTACGAAT TERM 2487 2385371 - 2385327 - T 100 -11.6 -4.99645 | gap 1, opp_overlap 2385325 2385322 2385327, overlap 2385322 ATGTCATAAATAAAA GCCCCCTTT-TCACAATATGC ATTT ACATGTTGTGGTAAAGGGGGC TCTCATTTTCTACGA TERM 2488 2385327 - 2385371 + T 100 -15.3 -3.14587 | gap 1, opp_overlap 2385327 2385322, overlap 2385325 2385322 ATGTCATAAATAAAA GCCCCCTTT-TCACAATATG CATTTA CATGTTGTGGTAAAGGGGGC TCTCATTTTCTACGA SAV2258 2386329 - 2385421 - | hypothetical protein SAV2259 2386462 - 2386626 + | hypothetical protein SAV2260 2386871 - 2387188 + | hypothetical protein TERM 2489 2387318 - 2387365 + T 100 -12.3 -3.4033 | opp_overlap 2387307 2387323, overlap 2387323 AAAATTTCAAATTTT AAAAAGCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGCTTTTA TATTATCTATCGTTT TERM 2490 2387323 - 2387360 + T 100 -12.2 -4.77867 | opp_overlap 2387323, overlap 2387318 TTCAAATTTTAAAAA GCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGC TTTTATATTATCTAT TERM 2491 2387360 - 2387323 - T 100 -12.2 -4.70879 | opp_overlap 2387318 2387323 TTCAAATTTTAAAAA GCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGC TTTTATATTATCTAT SAV2261 2390539 - 2387372 - | acriflavin resistance protein TERM 2492 2388208 - 2388219 + g 79 -4.4 -5.31877 | TACCATTTTCTTTAA CAGT CGTA ACTG TTTTTTCTGGTAAGT TERM 2493 2388928 - 2388940 + g 71 -3.3 -5.11613 | overlap 2388916 GATGTTGTTTATTAC GACGT TTA ACGCC TTTTTTAAATAGTGT TERM 2494 2390641 - 2390607 - R 78 -4.3 -5.41143 | opp_overlap 2390607 TATTGTGTAAAAAAA TCTGAACGCAAATGA CAGTC TTATGAGCGTTCAGA TTTCAGTCGTTAATC fmhB 2391921 - 2390656 - | FmhB protein TERM 2495 2390699 - 2390715 + g 70 -8.1 -3.23598 | TTAATTTTAGCTTTT GTTAAAC GCG GTTTAAC TTGCTCAATTAATTG SAV2263 2392310 - 2392561 + | hypothetical protein SAV2264 2393317 - 2392553 - | hypothetical protein TERM 2496 2393455 - 2393439 - H 70 -5.1 -4.57569 | opp_overlap 2393438 2393440, overlap 2393440 CTATTGTTGTAAAAA GGTTAGC TAA GCTAACT ATTTTGTCTTAGGAG TERM 2497 2393440 - 2393454 + H 82 -8.6 -3.94773 | opp_overlap 2393440 2393439, overlap 2393438 TATTGTTGTAAAAAG GTTAGC TAA GCTAAC TATTTTGTCTTAGGA TERM 2498 2393454 - 2393440 - H 74 -8.6 -3.3422 | opp_overlap 2393438 2393440, overlap 2393439 TATTGTTGTAAAAAG GTTAGC TAA GCTAAC TATTTTGTCTTAGGA SAV2265 2393479 - 2393919 + | MarR family transcription regulator SAV2266 2393912 - 2395123 + | transporter ybfD SAV2267 2395575 - 2395225 - | hypothetical protein TERM 2499 2395966 - 2395982 + r 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCT GTCAGC TTCTGTGTTGGGGCC moaA 2397174 - 2396152 - | molybdenum cofactor biosynthesis protein A mobA 2397793 - 2397194 - | molybdopterin-guanine dinucleotide biosynthesis protein A moaD 2398033 - 2397800 - | molybdopterin synthase small subunit moaE 2398485 - 2398039 - | molybdopterin converting factor TERM 2500 2398505 - 2398523 + r 77 -4.6 -5.19819 | overlap 2398508 TTCAATCCTCTATGT TAATTGTG TAT CACAATCA TTTTTAATTTTATTT mobB 2398984 - 2398499 - | molybdopterin-guanine dinucleotide biosynthesis TERM 2501 2398934 - 2398920 - G 71 -6.4 -4.15044 | overlap 2398905 TGTGTCTTTAAGAAA GAGACA ATA TGCCTC ATCAATGTTGTCTTA TERM 2502 2398944 - 2398955 + g 73 -4.4 -4.85599 | TGCCTCATCAATGTT GTCT TACC AGAC TTTTTGTAACCTACA moeA 2400240 - 2398981 - | molybdopterin biosynthesis protein moaC 2400303 - 2400797 + | molybdenum cofactor biosynthesis protein C moaB 2401305 - 2400799 - | molybdopterin precursor biosynthesis moeB 2402340 - 2401336 - | molybdopterin biosynthesis protein modC 2403115 - 2402510 - | molybdenum transport ATP-binding protein modB 2403787 - 2403116 - | molybdenum ABC transporter permease TERM 2503 2403525 - 2403499 - G 100 -12.4 -3.965 | overlap 2403492 GTGGAAAACTAACAA TGACAGATGCTA TCA CAGCACCTGTCA AAGTGAACACTACAG modA 2404583 - 2403801 - | molybdate-binding protein TERM 2504 2404839 - 2404819 - H 70 -5.5 -4.21827 | opp_overlap 2404833 GCAAATATGTTAAAA TTTTAAGCA AAT TGCTTTAAA ATAAAGTTTAAGCTA narQ 2404872 - 2405669 + | formate dehydrogenase accessory protein TERM 2505 2405807 - 2405771 - T 100 -13.2 -4.85195 | opp_overlap 2405771 AAAACAATTTAAAAA GCAGTAAGTTGATTTC TACTC GAAACCAGCTTACTGC TTTTTTATTCTAATA TERM 2506 2405771 - 2405807 + T 100 -13.2 -5.58179 | opp_overlap 2405771 AAAACAATTTAAAAA GCAGTAAGTTGATTTC TACTC GAAACCAGCTTACTGC TTTTTTATTCTAATA SAV2281 2406611 - 2405841 - | hypothetical protein SAV2282 2407242 - 2406688 - | biotin biosynthesis protein SAV2283 2408304 - 2407363 - | inosine-adenosine-guanosine-nucleoside hydrolase TERM 2507 2408072 - 2408059 - G 79 -4.5 -5.24129 | opp_overlap 2408059 TGCGTCCATAAAAAA GGCAT GCAT ACGCC ATTCTTTAGGAAATG TERM 2508 2408678 - 2408633 - R 74 -5 -4.87665 | gap 1, opp_overlap 2408649 TTCTAGCTATAAAAA TAAGAGCCTAATACAATATCA AAAGA TGATAT-GTTTCAGACTCTCA TTTCACTAACTTATA SAV2284 2409610 - 2408702 - | ferric hydroxamate receptor 1 TERM 2509 2409674 - 2409694 + r 85 -2 -6.09196 | gap 1, opp_overlap 2409679, overlap 2409679 GATTGCATATACATT TACAATAGC TAGT GCTATT-TA TTTTTTTATTTTCGC TERM 2510 2409679 - 2409690 + r 78 -4.4 -5.36181 | opp_overlap 2409679, overlap 2409674 CATATACATTTACAA TAGC TAGT GCTA TTTATTTTTTTATTT SAV2285 2410978 - 2409824 - | butyryl-CoA dehydrogenase SAV2286 2411117 - 2411025 - | hypothetical protein TERM 2511 2411165 - 2411123 - R 100 -9.5 -4.87665 | gap 1, opp_overlap 2411124 2411127 2411134, overlap 2411125 TTTTATCCATAAAAA TA-CACCTTAAACTATACAA TTCG CTGTATGGTTTAAGGTGATA TTCAAACAATATTAG TERM 2512 2411124 - 2411163 + r 90 -11.7 -3.03007 | opp_overlap 2411123 2411125, overlap 2411127 2411134 TTTATCCATAAAAAT ACACCTTAAACTATACA ATTCGC TGTATGGTTTAAGGTGA TATTCAAACAATATT TERM 2513 2411162 - 2411125 - R 100 -13.7 -4.06182 | opp_overlap 2411124 2411127 2411134, overlap 2411123 TTATCCATAAAAATA CACCTTAAACTATACAA TTCG CTGTATGGTTTAAGGTG ATATTCAAACAATAT TERM 2514 2411127 - 2411160 + r 89 -12 -2.73994 | opp_overlap 2411125 2411123, overlap 2411124 2411134 ATCCATAAAAATACA CCTTAAACTATACA ATTCGC TGTATGGTTTAAGG TGATATTCAAACAAT SAV2287 2412100 - 2411195 - | urea transporter ureA 2412360 - 2412662 + | urease subunit gamma TERM 2515 2412866 - 2412880 + G 79 -10 -3.28001 | AACATTTAGATATTC CAGCTG GAG CAGCTG TTCGATTTGAACCTG ureB 2412676 - 2413086 + | urease subunit beta TERM 2516 2414629 - 2414619 - g 74 -6.8 -4.37711 | GCATTAAATTTAAAA CGCA TGG TGCG TCCAGTTAAAAATAT ureC 2413083 - 2414798 + | urease subunit alpha ureE 2414811 - 2415263 + | urease accessory protein UreE TERM 2517 2415291 - 2415303 + G 71 -7.7 -3.5393 | AAGATTATTTCAGTT CTGTG ATT CACAG TTTCCAACAGGTGCT ureF 2415256 - 2415945 + | urease accessory protein UreF ureG 2415958 - 2416572 + | urease accessory protein UreG ureD 2416764 - 2417408 + | urease accessory protein UreD TERM 2518 2417469 - 2417417 - T 90 -6.6 -5.52079 | opp_overlap 2417417 ATATTAAAATAAAAA GACTAG-TGTACCTTGTTTCAAGCTT AAT AAGCT-GAAATAAGGTATGGCTAGTC TTTAACTTTAATTAA TERM 2519 2417417 - 2417469 + T 100 -13.2 -3.89336 | opp_overlap 2417417 ATATTAAAATAAAAA GACTAGT-GTACCTTGTTTCAAGCTT AAT AAGCT-GAAATAAGGTATGGCTAGTC TTTAACTTTAATTAA sarR 2417944 - 2417597 - | accessory regulator A-like protein TERM 2520 2417852 - 2417864 + g 80 -6.3 -4.78477 | ATAAATTTCTTCATA GTTCA AAT TGAAC TTCTTTTTTGTATCT SAV2296 2418698 - 2418372 - | hypothetical protein SAV2297 2419505 - 2418762 - | hypothetical protein SAV2298 2421486 - 2419531 - | transcription regulator TERM 2521 2421735 - 2421745 + H 74 -5.4 -4.97402 | ATAGAAACTTGATCG TTCG TGT CGAA TTTTTATGCATTTTC TERM 2522 2421882 - 2421896 + H 77 -7.2 -4.20797 | opp_overlap 2421881 GCCGTAGTTATAAGT TTTGCA AAA TGCAAA TTTCTATACTTTTAA ssaA 2422096 - 2422899 + | secretory antigen precursor SsaA-like protein TERM 2523 2422921 - 2422949 + T 100 -14.7 -5.4387 | ATGGCTATGTTTTAC GCCAACAAGGTTT CAA GAGCCTTGTTGGC TTTTTTAATTTCTAT SAV2300 2423045 - 2422917 - | hypothetical protein TERM 2524 2423016 - 2422973 - G 100 -9.9 -5.52384 | opp_overlap 2422973 TTTCTATGAAAAAAA TCGAATTGGTAAAAATC TCAAAATTTC GATTTTCACCAATCCGA TTCACTCTGTAATAA TERM 2525 2423095 - 2423040 - G 80 -6.5 -4.67968 | gap 2 GTAATAAAGAATAAA CAACATACAGCC-A-TTGACACACCCA AATT TAGGCATGTCAAATCGGCTATACATTG ATAAATTTTTAGTTA SAV2301 2424733 - 2423333 - | Na_ antiporter TERM 2526 2424440 - 2424414 - G 82 -5.2 -5.21709 | overlap 2424416 GCTGATATTAAAAAA TAGCTTGGATTC AAT AAATCTAAGCCA TAATAAATCAAGGCT TERM 2527 2424522 - 2424553 + g 100 -9.5 -4.91459 | opp_overlap 2424518 2424519, overlap 2424518 2424517 ATAATTAAAATTGCA GGCATTGCAGTAT TTAAAC GTTCTGCAATGCC TTTTTCTAAATCTTG SAV2302 2425910 - 2424828 - | D-octopine dehydrogenase TERM 2528 2425997 - 2425975 - H 82 -6.3 -5.18995 | opp_overlap 2425975 2425996 AAGACAATATAAAAA TGATGCGAA TTCAT TACGCATCA TTATAAATGTTAAGT SAV2303 2426158 - 2426580 + | hypothetical protein TERM 2529 2426632 - 2426665 + F 100 -12.8 -6.04419 | TTAATCTCATTGTAA CTTTGACTAATTTT TATTAC AAAATTAGTCAAAG TTTTTTTATTCTTTT SAV2304 2426817 - 2427317 + | hypothetical protein TERM 2530 2427383 - 2427407 + F 100 -8 -5.69023 | gap 1 TCATCAAAAAACTTT GAGCTT-TCCT TTAT AGGAGAAGCTC TTTTTTTGCTATTTT SAV2305 2427678 - 2428631 + | glycerate dehydrogenase TERM 2531 2428712 - 2428664 - T 100 -9.8 -4.9934 | opp_overlap 2428670, overlap 2428667 2428670 ATAACATTATAAAAA CAAGAACCCCCATATGTTGA GCTCTCGTT TCAACATACGGGGGTTTTCA TATTGTTGTATTATT TERM 2532 2428709 - 2428667 - T 100 -11.5 -4.57057 | opp_overlap 2428670, overlap 2428664 2428670 ACATTATAAAAACAA GAACCCCCATATGTTGA GCTCTCGTT TCAACATACGGGGGTTT TCATATTGTTGTATT TERM 2533 2428706 - 2428670 - T 100 -13.2 -4.36508 | opp_overlap 2428670, overlap 2428667 2428664 TTATAAAAACAAGAA CCCCCATATGTTGA GCTCTCGTT TCAACATACGGGGG TTTTCATATTGTTGT TERM 2534 2428670 - 2428706 + T 100 -11.7 -4.50841 | opp_overlap 2428670 2428667 2428664 TTATAAAAACAAGAA CCCCCATATGTTGAG CTCTCGT TTCAACATACGGGGG TTTTCATATTGTTGT SAV2306 2429847 - 2428723 - | hypothetical protein TERM 2535 2429070 - 2429051 - G 77 -5.1 -5.02323 | overlap 2429046 CGACCATAAACAAAA GATTTGA GTGGTT TCAAATC ATAAATATTATGCAA TERM 2536 2430048 - 2430059 + r 74 -2.2 -5.5074 | opp_overlap 2430038, overlap 2430038 2430030 ATATAGCATATTTGA TGCT ATAT AGCG TTTTTTGTTAGGTTA TERM 2537 2430149 - 2430102 - R 95 -11.7 -3.42583 | gap 2, opp_overlap 2430111, overlap 2430091 2430103 2430111 CTAACACACTCAGAA TGCGCTAAAGGAGCTCGAAACAA TAAA TTGTTCC-AGCTCCTTTAA-GCA CCGATGTCTTATTTA TERM 2538 2430150 - 2430103 - R 100 -13.1 -2.65068 | opp_overlap 2430111, overlap 2430091 2430102 2430111 TAACACACTCAGAAT GCGCT-AAAGGAGCTCGAAACAA TAAA TTGTTCC-AGCTCCTTTAAGCAC CGATGTCTTATTTAT TERM 2539 2430141 - 2430111 - R 83 -9.9 -3.58533 | gap 1, opp_overlap 2430111, overlap 2430102 2430103 TCAGAATGCGCTAAA GGAGCTCGAAACAA TAAA TTGTTCC-AGCTCC TTTAAGCACCGATGT TERM 2540 2430111 - 2430141 + r 71 -7.7 -3.53563 | gap 1, opp_overlap 2430111 2430102 2430103 TCAGAATGCGCTAAA GGAGCTCGAAACAA TAAA TTGTTCC-AGCTCC TTTAAGCACCGATGT SAV2307 2430934 - 2430158 - | autolysin E (1e-98,63%,84%,258-258) TERM 2541 2431373 - 2431338 - R 100 -10.8 -4.7373 | opp_overlap 2431365, overlap 2431371 TTATTCCATCAAAAA CACCCTTTTTAATTTT TACA AAAATTAAAAAAAGTG CTCCTACACTGCTTG TERM 2542 2431401 - 2431371 - R 95 -6.3 -5.85011 | gap 1, opp_overlap 2431365, overlap 2431338 CAAAAATTAAAAAAA GTGCTCCTACACTG CTTG CA-TGTAGAAACAC TTTTTCATTGTAATG SAV2308 2431890 - 2431417 - | hypothetical protein SAV2309 2434844 - 2431890 - | formate dehydrogenase-like protein TERM 2543 2432720 - 2432739 + g 73 -7.2 -3.92746 | GTTGAATACGACGTT CGGTATTT GTAA AAGTACCG TCTTTTTCAAGTGAA TERM 2544 2435361 - 2435318 - R 100 -15.6 -4.9448 | opp_overlap 2435314 2435318 AGGCATTAAATAAAA TAGCCCATAAATACAAAGTG TTAT CACCTTCTATTTACGGGCTA TTAGTTCTATTCGTT TERM 2545 2435318 - 2435361 + r 93 -11.2 -3.56056 | opp_overlap 2435318, overlap 2435314 AGGCATTAAATAAAA TAGCCCATAAATACAAAGTG TTAT CACCTTCTATTTACGGGCTA TTAGTTCTATTCGTT SAV2310 2436394 - 2435447 - | transcription antiterminator LytR TERM 2546 2435615 - 2435639 + g 81 -7.4 -4.39318 | opp_overlap 2435618 CGTATTCAAATCACC TAATGTTAAA TCTGT TTTAACATTA TTTTGAATTTCATTC SAV2311 2437324 - 2436527 - | suppressor protein suhB TERM 2547 2436933 - 2436944 + g 73 -4.4 -4.84359 | CCTTCTCCTCGTATT GCTT TATA AAGC TTTTTATGCGGATAA TERM 2548 2437447 - 2437425 - H 100 -9.2 -5.64274 | TTATGCATAAAAAAA TCGGCTAG TCACGTG CTAGCCGA CAAATAGAAAGGAAA SAV2312 2437709 - 2438401 + | hypothetical protein TERM 2549 2438386 - 2438419 + T 100 -15.5 -4.53303 | gap 1, opp_overlap 2438386 TCATCAATTTTTAAA CCCCATCGATTCC-TA AAC TATGGAGTCGATGGGG TTTTATCTACGCATA TERM 2550 2438419 - 2438386 - T 100 -13.3 -3.61764 | gap 1, opp_overlap 2438386 TCATCAATTTTTAAA CCCCATCGATTCC-TA AAC TATGGAGTCGATGGGG TTTTATCTACGCATA SAV2313 2439163 - 2438426 - | hypothetical protein SAV2314 2439212 - 2439541 + | hypothetical protein TERM 2551 2439765 - 2439790 + F 81 -9.3 -3.57263 | opp_overlap 2439770 2439772, overlap 2439768 CAGTATGACTTACGG TAATATATCAA TATA TTGATATATTA TTTGCACATGGGAGT TERM 2552 2439768 - 2439787 + F 71 -6.6 -3.92542 | opp_overlap 2439770 2439772, overlap 2439765 TATGACTTACGGTAA TATATCAA TATA TTGATATA TTATTTGCACATGGG SAV2315 2439986 - 2440858 + | RpiR family transcription regulator TERM 2553 2441042 - 2440996 - T 78 -6.2 -4.8048 | opp_overlap 2440993 2440996 2441040 TTCTTATATTAAAAA CAAACGCAGTTGATTACA-GGA TTCAT TCCATATA-TCAATTGCGTTTG TTATTTTAATAATGC TERM 2554 2440996 - 2441042 + T 72 -6.2 -4.27443 | opp_overlap 2440996, overlap 2440993 2441040 TTCTTATATTAAAAA CAAACGCAGTTGATTACA-GGA TTCAT TCCATATA-TCAATTGCGTTTG TTATTTTAATAATGC SAV2316 2442624 - 2441245 - | transport protein TERM 2555 2442408 - 2442386 - G 82 -10 -3.52896 | opp_overlap 2442386 GCAGGATGTATATAA TCACTTGCAA ATG TTGCAAATGA TCCTGTTGTAGGGTT SAV2317 2442904 - 2443260 + | hypothetical protein SAV2318 2443257 - 2443442 + | hypothetical protein SAV2319 2443729 - 2443538 - | hypothetical protein SAV2320 2444375 - 2443740 - | phosphoglycolate phosphatase SAV2321 2445367 - 2444450 - | sodium-dependent transporter SAV2322 2445635 - 2446165 + | hypothetical protein TERM 2556 2446171 - 2446220 + T 95 -6.2 -5.86465 | gap 3, opp_overlap 2446175 2446178, overlap 2446178 TATATCATAATAAAA GACACAT--CTATACGATGATCATT TAC AATGATTG-CGTATAGTGATGTGTC TTTTTTTGTATTATT glvC 2447835 - 2446231 - | PTS system, arbutin-like IIBC component TERM 2557 2447992 - 2448008 + H 75 -4.5 -5.01732 | opp_overlap 2448002 TATAATCAGATTATC TTTTCAT ATA GTGAAAA TTTTTTCACGACCTT SAV2324 2448165 - 2448929 + | transcriptional regulator SAV2325 2449493 - 2448987 - | hypothetical protein TERM 2558 2449057 - 2449045 - G 71 -7.7 -3.69092 | opp_overlap 2449053 AACATCAATTCGAAA CCATG CAC CATGG CATCATGATATTCTT SAV2326 2451039 - 2449660 - | Na_ antiporter TERM 2559 2450935 - 2450956 + g 73 -3.7 -5.04175 | opp_overlap 2450932 2450933, overlap 2450938 AAATAATAACAAGGG GAATAATGC CCAA GCATTGCTC TTTTTATGTACTTCC TERM 2560 2451034 - 2451001 - G 70 -4 -4.8622 | gap 1, opp_overlap 2451003, overlap 2451003 CTTTCCAATTAAAAA TACCTCTTTCTCACA AACGA TG-AAGAAAGAGGTT TTCATGTGCTTTACC TERM 2561 2451003 - 2451032 + g 72 -5.9 -4.40894 | gap 1, opp_overlap 2451003 2451001 TTCCAATTAAAAATA CCTCTTTC-TCA CAAACGA TGAAGAAAGAGG TTTTCATGTGCTTTA SAV2327 2451767 - 2451198 - | hypothetical protein TERM 2562 2451420 - 2451438 + g 74 -6.1 -4.58303 | TAGACGCGTATTTTT TATACTG ATTCC CAGTATA TTTTCTAATATTTGA TERM 2563 2452160 - 2452133 - R 79 -7.8 -4.28045 | overlap 2452130 AGAGTATTAAAATAA GCCGATAAAGAT ACAC ACCTTTACCGAC TATTTAAAATACACT SAV2328 2453135 - 2452254 - | dehydrogenase SAV2329 2454367 - 2453246 - | amino acid amidohydrolase TERM 2564 2454630 - 2454597 - R 100 -14.1 -4.64846 | opp_overlap 2454597 2454624 TTACAAACCACAAAA GCTCTAAACATTAGT GTAA ACCAATGCTTAGAGC TTTCTAATTATTTTA TERM 2565 2454597 - 2454630 + r 91 -9.7 -4.19947 | opp_overlap 2454597, overlap 2454624 TTACAAACCACAAAA GCTCTAAACATTAGT GTAA ACCAATGCTTAGAGC TTTCTAATTATTTTA hutI 2455881 - 2454643 - | imidazolonepropionase TERM 2566 2455581 - 2455605 + g 74 -6.5 -4.27617 | opp_overlap 2455581, overlap 2455582 CACCCATTTCTAATA TTTCAAGGTAA GAC TTACCTTGACG TTTTAATGACATCTC hutU 2457542 - 2455881 - | urocanate hydratase TERM 2567 2458482 - 2458462 - g 90 -3.9 -5.84432 | TAGAATATAAAAAAA TTCGTCCAA ACT TAGGCCGAA AAATTTATATCAATT SAV2332 2457702 - 2458586 + | hypothetical protein fosB 2458828 - 2459247 + | fosfomycin resistance protein FosB TERM 2568 2459403 - 2459366 - T 84 -8.6 -4.31608 | opp_overlap 2459365 2459366 AACAAACATAAATAA GCAGTAAGATGACT ACAACTTAAG AGTCTTCTTACTGC AATTATTTTTCAAAT TERM 2569 2459366 - 2459403 + T 70 -8.6 -2.54233 | opp_overlap 2459366, overlap 2459365 AACAAACATAAATAA GCAGTAAGATGACT ACAACTTAAG AGTCTTCTTACTGC AATTATTTTTCAAAT SAV2334 2460438 - 2459503 - | formimidoylglutamase TERM 2570 2460766 - 2460778 + G 78 -7.7 -4.1523 | TTTTCAATGGGCAAT GACGA TTT TCGTC TTCTTTGTCATTACA TERM 2571 2461973 - 2461956 - g 95 -8.5 -5.15381 | AACATATCGAAAAAA CTGAAGA ACAA TCTTCAG ATAAAAACAAATAAT SAV2335 2460728 - 2461987 + | hypothetical protein TERM 2572 2461995 - 2462036 + T 100 -16.1 -4.60143 | gap 1, opp_overlap 2461985 2461995 ACAAATAATAACAAA GCGCTTGCTAGTA-CCTCTT AAA AAGATGATGCTAGCAAGCGC TTTTCTATACTATAT TERM 2573 2462036 - 2461995 - T 100 -16.1 -4.64159 | gap 1, opp_overlap 2461995, overlap 2461985 ACAAATAATAACAAA GCGCTTGCTAGTACC-TCTT AAA AAGATGATGCTAGCAAGCGC TTTTCTATACTATAT SAV2336 2462739 - 2462053 - | ribose 5-phosphate isomerase SAV2337 2462913 - 2463566 + | hypothetical protein SAV2338 2464821 - 2463802 - | putative aldose 1-epimerase SAV2339 2465177 - 2464851 - | hypothetical protein TERM 2574 2465388 - 2465335 - R 100 -8.5 -5.88197 | gap 1, opp_overlap 2465335 2465361 CTAAATATAAAAAAA TAAGAGTAACACGCTTTCATCATCAT TTT AT-ATGATAAATGTGTGTCACTCTCA TCAATTTTATTTTTT SAV2340 2466627 - 2465395 - | hypothetical protein TERM 2575 2466330 - 2466351 + g 82 -3.1 -5.73672 | overlap 2466322 2466332 GATTCACCTTGATAA TATAAGCTT TATC AAGTTTATG TTTTTTTACTTCTTT SAV2341 2467519 - 2466620 - | ABC transporter TERM 2576 2467740 - 2467715 - RH 86 -6.2 -5.42259 | opp_overlap 2467715 TTATTTGTAAAAAAA TATCCCAGCA TCATTG TGCCGAGATA TTTATATCATTACAA SAV2342 2468370 - 2467750 - | hypothetical protein SAV2343 2468362 - 2468553 + | hypothetical protein SAV2344 2468769 - 2469377 + | putative 3-methyladenine DNA glycosylate TERM 2577 2469432 - 2469469 + F 85 -4.8 -5.64274 | TATCTCCTTATAAGT CAATCAATCGTGCCGC CAACAT GCGGATGGGTTGATTG TTTTTTTGTCCATCA SAV2345 2469710 - 2470918 + | sodium/glutamate symporter TERM 2578 2470968 - 2470931 - T 100 -21.7 -2.7213 | opp_overlap 2470935 2470940, overlap 2470935 2470940 TAAACACCAAACTCA TAAATAAAAGAGGAGGC CTCC GCCTCCTCTTTTATTTA TCCTCGATGTATATT TERM 2579 2470964 - 2470935 - T 100 -18.1 -4.03204 | opp_overlap 2470935 2470940, overlap 2470931 2470940 CACCAAACTCATAAA TAAAAGAGGAGGC CTCC GCCTCCTCTTTTA TTTATCCTCGATGTA TERM 2580 2470935 - 2470964 + T 100 -18.1 -3.98661 | opp_overlap 2470935 2470931 2470940, overlap 2470940 CACCAAACTCATAAA TAAAAGAGGAGGC CTCC GCCTCCTCTTTTA TTTATCCTCGATGTA TERM 2581 2470959 - 2470940 - T 100 -13.6 -5.01553 | opp_overlap 2470935 2470940, overlap 2470935 2470931 AACTCATAAATAAAA GAGGAGGC CTCC GCCTCCTC TTTTATTTATCCTCG TERM 2582 2470940 - 2470959 + T 100 -13.6 -5.02323 | opp_overlap 2470940 2470935 2470931, overlap 2470935 AACTCATAAATAAAA GAGGAGGC CTCC GCCTCCTC TTTTATTTATCCTCG fni 2472015 - 2470966 - | isopentenyl pyrophosphate isomerase SAV2347 2472993 - 2472046 - | divalent cation transport SAV2348 2473096 - 2473581 + | hypothetical protein SAV2349 2473578 - 2473997 + | hypothetical protein TERM 2583 2474090 - 2474040 - T 100 -12.8 -5.26119 | opp_overlap 2474037 2474040 TTTTCAAAAACAAAA CCCAATTACGTTTTCATGTCAAAT ATC ATCTTGCATGAAATCGTAACTGGG TCAATTGTATGTTAT TERM 2584 2474040 - 2474090 + T 78 -10.6 -2.66737 | opp_overlap 2474040, overlap 2474037 TTTTCAAAAACAAAA CCCAATTACGTTTTCATGTCAAAT ATC ATCTTGCATGAAATCGTAACTGGG TCAATTGTATGTTAT SAV2350 2475025 - 2474105 - | esterase SAV2351 2475233 - 2475871 + | hypothetical protein TERM 2585 2476053 - 2476025 - T 93 -5.4 -6.08342 | gap 1 CAACAAATAAAAAAA GTATCGATAACCA TATT TGGC-ACCGATAC TTTAAAAATCATGTC SAV2352 2478048 - 2476117 - | multidrug resistance protein TERM 2586 2477071 - 2477055 - G 77 -5.9 -4.74801 | opp_overlap 2477048 2477061 CAATCGTACTAAAAA TGATACC TGG GATATCA GCTTTAGGGTTTGTT SAV2353 2478708 - 2478061 - | hypothetical protein TERM 2587 2478664 - 2478643 - G 81 -5.9 -4.99645 | ATTCCAGAAATAAAA GCCAGCAAT CCCA ATTGCTAAC AGTACAACAACCGTA SAV2354 2478829 - 2479383 + | transcriptional regulator TERM 2588 2479515 - 2479486 - T 90 -8 -5.1244 | opp_overlap 2479486 CTATCAATATAAAAA TGCCGAGATT TCCACATAAT AATCTCGGCA TTTTTATTTTTGATG TERM 2589 2479486 - 2479515 + T 95 -8 -5.65496 | opp_overlap 2479486 CTATCAATATAAAAA TGCCGAGATT TCCACATAAT AATCTCGGCA TTTTTATTTTTGATG tcaB 2480818 - 2479610 - | TcaB protein TERM 2590 2481041 - 2480993 - R 90 -7.9 -5.24129 | gap 2, opp_overlap 2480994 2480996, overlap 2480996 TTTTTTCACAAAAAA CAATCCCTTCAAAGTAATTCACA CTAAT TGTAAA-TACTTTGAAAGGA-TG TTGTTTGTATTCCAT TERM 2591 2481039 - 2480996 - R 100 -10.7 -4.72201 | gap 1, opp_overlap 2480994 2480996, overlap 2480993 TTTCACAAAAAACAA TCCCTTCAAAGTAATTCACA CTAAT TGTAAA-TACTTTGAAAGGA TGTTGTTTGTATTCC tcaA 2482469 - 2481087 - | TcaA protein TERM 2592 2482702 - 2482656 - R 70 -4.1 -4.95876 | gap 1 AATTATAACTAAAAA GAAGGTGTTCAATACATA CATATTTAGTCT TATAT-TTGAACACCTTC AAAAACCTATTTATG tcaR 2483164 - 2482709 - | TcaR transcription regulator SAV2358 2483359 - 2484327 + | hypothetical protein TERM 2593 2484439 - 2484470 + T 73 -3.7 -5.24129 | opp_overlap 2484439 AATAAATAAACTAAA GCACGTCATCATT TTATAT AATAGTGACGCGC TTTTTTGTAAACCCA TERM 2594 2484470 - 2484439 - T 70 -5.9 -4.30977 | opp_overlap 2484439 AATAAATAAACTAAA GCACGTCATCATT TTATAT AATAGTGACGCGC TTTTTTGTAAACCCA SAV2359 2485223 - 2484558 - | ABC transporter ATP-binding protein SAV2360 2486278 - 2485223 - | putative ABC transporter, permease protein SAV2361 2486414 - 2487088 + | two component response regulator SAV2362 2487081 - 2488454 + | two component histidine kinase sensor TERM 2595 2488459 - 2488499 + F 82 -8.6 -3.97283 | gap 1 ATTCACATTAATCTC TACCTCCTGAAA-AAACAT TTCT GTTTTTATTTCAGGAGGTA TCTTTTATATTGATT SAV2363 2488617 - 2489060 + | hypothetical protein SAV2364 2489057 - 2489512 + | hypothetical protein TERM 2596 2489534 - 2489568 + T 77 -7.3 -4.28187 | opp_overlap 2489534, overlap 2489529 TTAACCACTAAAAAA CGGTAATGTCTAT CACATTAAA AAAGACATTACCG TTTCGTTTATTATTT TERM 2597 2489568 - 2489534 - T 90 -8 -5.2189 | opp_overlap 2489534 2489529 TTAACCACTAAAAAA CGGTAATGTCTATC ACATTAA AAAAGACATTACCG TTTCGTTTATTATTT SAV2365 2491113 - 2489578 - | malate:quinone oxidoreductase TERM 2598 2491379 - 2491404 + r 84 -9.1 -3.74615 | opp_overlap 2491379, overlap 2491370 GATCCATAAAAAAAA GATGAGATGTT AGAA AACATCTCACC TTCTGTATATTTATA TERM 2599 2491404 - 2491379 - R 100 -11.3 -5.96219 | opp_overlap 2491379 2491370 GATCCATAAAAAAAA GATGAGATGTT AGAA AACATCTCACC TTCTGTATATTTATA SAV2366 2493035 - 2491437 - | L-lactate permease lctP-like protein SAV2367 2493352 - 2495025 + | hypothetical protein TERM 2600 2495103 - 2495146 + T 88 -5.5 -5.53288 | opp_overlap 2495108, overlap 2495108 ACTTTAAAATACGCA AAAAACGGTAAACCCTA ATTCATATTA TAGAGTTTACCGTTTTA TTTTTTTAACTTGCA TERM 2601 2495141 - 2495108 - T 90 -7.6 -5.19916 | opp_overlap 2495103 2495108 AAAATACGCAAAAAA CGGTAAACCCTA ATTCATATTA TAGAGTTTACCG TTTTATTTTTTTAAC TERM 2602 2495108 - 2495141 + T 86 -5.4 -5.55855 | opp_overlap 2495108, overlap 2495103 AAAATACGCAAAAAA CGGTAAACCCTA ATTCATATTA TAGAGTTTACCG TTTTATTTTTTTAAC SAV2368 2495793 - 2495179 - | hypothetical protein SAV2369 2496622 - 2496107 - | transcription repressor of sporulation, septation and degradation PaiA SAV2370 2496813 - 2497817 + | oxidoreductase TERM 2603 2497853 - 2497831 - T 100 -9.9 -4.75372 | opp_overlap 2497831 AGTATTCATGAAAAA GACATCCCG TTATG CGAGATGTC TTTTTTAATTTAGTA TERM 2604 2497831 - 2497853 + T 95 -8.4 -5.40004 | opp_overlap 2497831 AGTATTCATGAAAAA GACATCCCGT TAT GCGAGATGTC TTTTTTAATTTAGTA SAV2371 2498264 - 2497863 - | attachment to host cells and virulence SAV2372 2499295 - 2498300 - | thioredoxin reductase TERM 2605 2499542 - 2499497 - R 86 -7.1 -5.16133 | opp_overlap 2499495 2499497 ATCACAATATAAAAA CACACCTTTCAAAGTAAGA AACAACAA TGTTCCTTTGAAAGATGTG TATATTTTTTAGTTC SAV2373 2499997 - 2499566 - | hypothetical protein TERM 2606 2500144 - 2500185 + r 74 -6.7 -4.31608 | gap 1, opp_overlap 2500144, overlap 2500141 GCTATACAAATAAAA TAGCTATACCATGACGCTCG CTA CAAACGTCTTG-TATAGCTA TTATTTCTATTTATT TERM 2607 2500185 - 2500144 - R 100 -11.1 -5.05113 | gap 1, opp_overlap 2500144 2500141 GCTATACAAATAAAA TAGCTATACCATGACGCTCG CTA CAAACGTCTTG-TATAGCTA TTATTTCTATTTATT SAV2374 2501481 - 2500204 - | hypothetical protein SAV2375 2501642 - 2502265 + | hypothetical protein SAV2376 2502311 - 2503255 + | cationic transporter scrA 2504782 - 2503340 - | PTS system, sucrose-specific IIBC component TERM 2608 2504135 - 2504119 - G 70 -3.7 -5.00138 | overlap 2504121 TATGCAAACCAAAAA CATCCCA ATA TGGAATA GCCTTACCTGCTTCA SAV2378 2504965 - 2505303 + | hypothetical protein TERM 2609 2505350 - 2505380 + T 72 -4.7 -4.9041 | gap 1 GAGTTTTTATTATTA GGCGGCC-AGTCCA TTAT TGGGCTTGGTTGTC TTCTTTTTTTCTCCT tnp 2506666 - 2505347 - | transposase TERM 2610 2506767 - 2506746 - H 82 -4.4 -5.52384 | overlap 2506749 TGTGTATTAAAAAAA GCAGGAAG TTTTAC CTTCCCAC CATAAAAGATGAAGA SAV2380 2506776 - 2506868 + | hypothetical protein TERM 2611 2510059 - 2510044 - g 73 -7.6 -3.75817 | opp_overlap 2510044, overlap 2510042 CTTGTACAACAAATA TGGTAG CCCC CTACCA TTAATGCATTTATAT SAV2381 2508356 - 2510461 + | transcription regulatory protein SAV2382 2510532 - 2510954 + | general stress protein TERM 2612 2511081 - 2511119 + F 100 -10.4 -4.788 | AATGTATTGTTTTTA GACACACTTTATTCACAT TTA ACGTGATTAGGGTGTGTC TTTTTAAATTAATTT SAV2383 2511218 - 2511574 + | hypothetical protein TERM 2613 2511662 - 2511607 - T 100 -14.5 -3.27503 | gap 1, opp_overlap 2511613, overlap 2511613 GTAATATAGAAGATA TTAAAAGCAGCAGTAAGAT-GTTTTC TAATT GAAAATTATCTTACTGCTGCTTTTTA AGAATTACTGTGTCA TERM 2614 2511613 - 2511656 + T 100 -15.7 -4.62872 | gap 1, opp_overlap 2511607 2511613 TAGAAGATATTAAAA GCAGCAGTAAGAT-GTTTTC TAATT GAAAATTATCTTACTGCTGC TTTTTAAGAATTACT TERM 2615 2511656 - 2511613 - T 100 -13.5 -4.44819 | gap 1, opp_overlap 2511613, overlap 2511607 TAGAAGATATTAAAA GCAGCAGTAAGAT-GTTTTC TAATT GAAAATTATCTTACTGCTGC TTTTTAAGAATTACT TERM 2616 2511841 - 2511869 + T 100 -17.5 -3.71378 | opp_overlap 2511841 TGCGCATGCATAAAA GCCCCTAACAACC AAA GGTTGTAAGGGGC TTTAAATGTCAGATA TERM 2617 2511869 - 2511841 - T 100 -17.5 -4.42386 | opp_overlap 2511841 TGCGCATGCATAAAA GCCCCTAACAACC AAA GGTTGTAAGGGGC TTTAAATGTCAGATA gltT 2513169 - 2511892 - | proton/sodium-glutamate symport protein TERM 2618 2512285 - 2512304 + g 83 -7.2 -4.75219 | opp_overlap 2512266 2512279, overlap 2512283 AGAAGTAATTTCTTT TGGAGAAC CGAA GTTTTCCA TTTTCTTCATCATTA SAV2385 2513716 - 2513351 - | hypothetical protein SAV2386 2514113 - 2514559 + | transcriptional regulator SAV2387 2514781 - 2515203 + | hypothetical protein TERM 2619 2515225 - 2515279 + T 100 -16.3 -3.66999 | gap 2, opp_overlap 2515225 2515232, overlap 2515228 2515232 TTAAAATGAATACAC TACTAAAGCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGCTTT-GTA TTTAACTAAATGAAT TERM 2620 2515279 - 2515225 - T 89 -11.9 -2.55583 | gap 2, opp_overlap 2515225 2515228 2515232, overlap 2515232 TTAAAATGAATACAC TACTAAAGCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGCTTT-GTA TTTAACTAAATGAAT TERM 2621 2515228 - 2515277 + T 100 -16.9 -3.41569 | gap 1, opp_overlap 2515225 2515232, overlap 2515225 2515232 AAATGAATACACTAC TAAAGCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGCTTTG TATTTAACTAAATGA TERM 2622 2515232 - 2515273 + T 100 -15.5 -4.35044 | gap 1, opp_overlap 2515225 2515232, overlap 2515228 2515225 GAATACACTACTAAA GCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGC TTTGTATTTAACTAA TERM 2623 2515273 - 2515232 - T 91 -11.1 -3.8448 | gap 1, opp_overlap 2515232 2515228 2515225, overlap 2515225 GAATACACTACTAAA GCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGC TTTGTATTTAACTAA narK 2516479 - 2515310 - | nitrite extrusion protein TERM 2624 2516585 - 2516564 - H 78 -6.7 -4.67011 | opp_overlap 2516564 AATGTTATTTAAAAA TGCTTTCAT TTAT ATGAAAACA TTCAATATAGACAAA SAV2389 2516848 - 2517762 + | hypothetical protein SAV2390 2517741 - 2518481 + | putative transcriptional regulator TERM 2625 2518718 - 2518670 - T 74 -8.4 -3.6135 | gap 1, opp_overlap 2518679, overlap 2518672 2518679 AAATATATTTCGAAA CA-TACAAAAGCGCCAGAAGATA ATCA TTTCCTCTCGCGCTTTTATACTG AATTATATTAATTTC TERM 2626 2518715 - 2518672 - T 93 -11.2 -3.37755 | opp_overlap 2518679, overlap 2518670 2518679 ATATATTTCGAAACA TACAAAAGCGCCAGAAGATA ATCA TTTCCTCTCGCGCTTTTATA CTGAATTATATTAAT TERM 2627 2518708 - 2518679 - T 82 -7.1 -4.74013 | opp_overlap 2518679, overlap 2518672 2518670 TCGAAACATACAAAA GCGCCAGAAGATA ATCA TTTCCTCTCGCGC TTTTATACTGAATTA SAV2391 2519392 - 2518739 - | response regulators of two-component regulatory SAV2392 2520449 - 2519415 - | two-component sensor histidine kinase SAV2393 2520925 - 2520473 - | hypothetical protein narI 2521622 - 2520945 - | nitrate reductase gamma chain SAV2395 2522190 - 2521615 - | nitrate reductase delta chain narH 2523742 - 2522183 - | nitrate reductase beta chain TERM 2628 2523637 - 2523659 + g 86 -8.4 -4.70659 | opp_overlap 2523626 ACCACATGTACTCAG CACCTGGACG ATT TGTCCAAGTG TTTTTACATGTCACA narG 2527421 - 2523732 - | respiratory nitrate reductase alpha chain TERM 2629 2524554 - 2524590 + g 90 -13.9 -3.12606 | opp_overlap 2524549 2524563 TGATAATTTACCATT CGTAGCAGATGAAATAC TTA GTATTGCATCTGCTACA TTACGTGCTGTATCA TERM 2630 2525361 - 2525371 + g 80 -6.8 -4.72188 | ATCCGGATCTTCTAT CGCA AAT TGCG TTTGTTTTGACTTAA TERM 2631 2527706 - 2527666 - R 70 -6.4 -4.1021 | gap 1, opp_overlap 2527666, overlap 2527669 TGGCACAACGACAAA TAAGGCTTCAACACGAA TATATTCT CTCG-GTTGAAACCTTA CTTATTCATTTATTT nasF 2528707 - 2527730 - | uroporphyrin-III C-methyl transferase nasE 2529012 - 2528698 - | assimilatory nitrite reductase nasD 2531421 - 2529016 - | nitrite reductase TERM 2632 2530346 - 2530358 + g 86 -4.9 -5.73339 | overlap 2530351 CCAACTACATTACCG TCTTT TAA AAAGA TTTTTTTATAGTTAT SAV2401 2532218 - 2531487 - | NirR protein TERM 2633 2532310 - 2532295 - R 84 -9 -4.33151 | CATTATAATGTAAAA TCAGGG AATT CCCTGA TGCCTGTAGTCATGC TERM 2634 2532426 - 2532368 - R 100 -14.2 -4.01698 | opp_overlap 2532368 2532425 TTAAATCAAAAAAAG CGACCGATATATGAATCCCTACTCAA CATTTAT TTGAGCAAGCATCAATATATCGGTCG CTTGTAGTGTATATT SAV2402 2532984 - 2532448 - | hypothetical protein TERM 2635 2532681 - 2532693 + g 73 -7.7 -3.79043 | opp_overlap 2532680 CATAAGTAAGTAATT GGCTA CCA TAGCC TTTCCCTTCATACTC TERM 2636 2533170 - 2533151 - R 90 -6.5 -5.53288 | opp_overlap 2533151 CTCAACGTAAAAAAA CCATTCA AATTCA TGAATGG TTTGGAAGAATGATT SAV2403 2534042 - 2533218 - | formate-nitrite transporter TERM 2637 2533554 - 2533540 - G 73 -7.2 -3.90048 | opp_overlap 2533547 2533548, overlap 2533538 2533548 CCTTTTGTAAAAATA TTCAAC CAT GTTGAA TCAACAGTCTTTTTC SAV2404 2534441 - 2534259 - | hypothetical protein SAV2405 2534992 - 2534525 - | hypothetical protein TERM 2638 2535164 - 2535127 - R 100 -10.7 -5.68438 | CTACGAAATAAAAAA CACACTCTATTCAGCTA TTAA CAGTTGAGTAGAGTGTG CAAACCTGTTGAATT SAV2406 2536725 - 2535178 - | Zn-binding lipoprotein adcA TERM 2639 2536486 - 2536474 - G 71 -6.3 -4.12532 | CCCTGTATACATAAA CAAGT CTG ACTTG CTTGCACTTAATATA TERM 2640 2536965 - 2536932 - R 95 -6.2 -5.94214 | AATATAAGAAAAAAA GACAATCTCTATCA TATTGC TAATAGAAATTGCC TTTTCATATTGTCCT SAV2407 2537286 - 2537020 - | hypothetical protein SAV2408 2537537 - 2537286 - | hypothetical protein TERM 2641 2537756 - 2537723 - R 78 -6.2 -4.84527 | TTCATACATTAAAAA GACAATCTCTATCA TATCGC TAATAGAAATTGCC TTTTCATATTGTCCT SAV2409 2538409 - 2537810 - | disulfide bond protein A SAV2410 2538790 - 2538428 - | hypothetical protein TERM 2642 2538667 - 2538679 + g 71 -3.4 -5.10154 | overlap 2538654 CGTTGCCTTTTTTGG CAAG TTGTT CTTG TTTTTGATTTTGAAT fmhA 2539045 - 2540295 + | fmhA protein SAV2412 2541123 - 2540392 - | ABC transporter (ATP binding subunit) SAV2413 2541614 - 2541120 - | ABC transporter (permease protein) SAV2414 2542599 - 2541820 - | ABC transporter (periplasmic amino acid-binding protein) SAV2415 2544159 - 2542720 - | multidrug resistance protein YcnB TERM 2643 2544019 - 2544008 - G 86 -5.8 -5.4833 | TTAGTCAATAAAAAA GCTG TTGT CAGC CATTGAACTTGTGTA TERM 2644 2544585 - 2544547 - R 100 -14.1 -3.16177 | opp_overlap 2544547 ACTTCACATATTTAA GAGCTGCATATACAC TCACTCCTT GTGTACATGCAGCTC TTTTTTTATAAGTAG TERM 2645 2544547 - 2544585 + r 100 -11.9 -5.64274 | opp_overlap 2544547 ACTTCACATATTTAA GAGCTGCATATACAC TCACTCCTT GTGTACATGCAGCTC TTTTTTTATAAGTAG SAV2416 2545277 - 2544591 - | phosphoglycerate mutase TERM 2646 2545128 - 2545110 - G 73 -8.2 -3.62775 | overlap 2545124 AGCACGTGTTAATAA CGATGTAA AAG CTACATCG ATGGCAATGTTATTT TERM 2647 2545546 - 2545523 - R 100 -9.8 -5.055 | opp_overlap 2545521 CTAAGGTTTAAAAAA TATTTTTAGG TAAG CCTAAAAATA GATGTAATAAAAACG TERM 2648 2545593 - 2545560 - R 86 -7.5 -5.12068 | TAGATGTAATAAAAA CGCCTCCTCAGATAT TTAT ATATCTATGAAGACG TTTAAATACATTATA SAV2417 2546470 - 2545604 - | cation efflux family protein TERM 2649 2546641 - 2546668 + H 80 -8.6 -3.84364 | gap 1, overlap 2546642 TGTTAGAAAGGCTTA TGCATTAG-TAGC GAT GCTATCTAATGCG TTCCTTTATTTTCTG TERM 2650 2546642 - 2546667 + H 76 -9.9 -2.88991 | gap 1, overlap 2546641 GTTAGAAAGGCTTAT GCATTAG-TAGC GAT GCTATCTAATGC GTTCCTTTATTTTCT TERM 2651 2546710 - 2546737 + H 81 -10 -3.47442 | gap 1, overlap 2546711 AGCTAGAAAGGCTTA TGCAGTT-GACGT TTT ACGTCCAACTGCG TTCCTTCGTCTTCTT TERM 2652 2546711 - 2546736 + H 85 -11.3 -2.67381 | gap 1, overlap 2546710 GCTAGAAAGGCTTAT GCAGTT-GACGT TTT ACGTCCAACTGC GTTCCTTCGTCTTCT TERM 2653 2546798 - 2546812 + H 84 -8.6 -4.2074 | CTCCCTGTTTGTTAA CTTTCG TCT CGAAAG TTTCTATGTTGGGAC TERM 2654 2546832 - 2546859 + H 80 -8.6 -3.84364 | gap 1, opp_overlap 2546832, overlap 2546828 2546833 TATGTTGGGACCCAA TGCATTAG-TAGC GAA GCTATCTAATGCG TTCCTTTATTTTCTG TERM 2655 2546833 - 2546858 + H 76 -9.9 -2.88991 | gap 1, opp_overlap 2546832, overlap 2546832 2546828 ATGTTGGGACCCAAT GCATTAG-TAGC GAA GCTATCTAATGC GTTCCTTTATTTTCT TERM 2656 2546921 - 2546935 + H 84 -8.6 -4.2074 | CTTCCTGTTTGTGAA CTTTCG CCT CGAAAG TTTCTATGTTGGGAC sbi 2547290 - 2548570 + | IgG-binding protein TERM 2657 2548642 - 2548673 + F 100 -9.5 -6.09196 | opp_overlap 2548642 AACCGTGATTAAAAA GAACCGCTGATTC TCAATC GAATCTGTGGTTC TTTTTTTATTTTCCA TERM 2658 2548673 - 2548642 - f 82 -7.3 -4.73388 | opp_overlap 2548642 AACCGTGATTAAAAA GAACCGCTGATTC TCAATC GAATCTGTGGTTC TTTTTTTATTTTCCA hlgA 2549106 - 2550035 + | gamma-hemolysin chain II precursor TERM 2659 2550046 - 2550098 + F 73 -8.8 -3.06302 | opp_overlap 2550058, overlap 2550058 AGTAAACAGTTCAAT CATTTTAAAAAATCCTGGGACA CTTCATACT TGTCTCAGGATTTTTTAACATA TTGAATCAGCCTCAT TERM 2660 2550058 - 2550086 + F 83 -6.8 -5.09173 | opp_overlap 2550058, overlap 2550046 AATCATTTTAAAAAA TCCTGGGACA CTTCATACT TGTCTCAGGA TTTTTTAACATATTG TERM 2661 2550086 - 2550058 - f 75 -4.6 -5.07053 | opp_overlap 2550058 2550046 AATCATTTTAAAAAA TCCTGGGACA CTTCATACT TGTCTCAGGA TTTTTTAACATATTG TERM 2662 2550320 - 2550306 - f 70 -5.8 -4.31587 | opp_overlap 2550305 TCGTAAAAAGAACAA TTTGTA TTT TACAAA CATTAATTAAAAATA TERM 2663 2550353 - 2550339 - f 78 -4.2 -5.34655 | TAATTAAAAATAAAA GCAAGA CAT TCGTGC AATCGGTTACCTTAA hlgC 2550602 - 2551549 + | gamma-hemolysin component C hlgB 2551551 - 2552528 + | gamma-hemolysin component B TERM 2664 2552533 - 2552574 + T 100 -12.5 -3.27523 | gap 1, opp_overlap 2552538, overlap 2552538 ACAATAAATAGCTAG TAAAACACGGTCGCCAACAG TAA TTGT-GACGACCGTGTTTTG ATTTATTATCTTAGT TERM 2665 2552538 - 2552569 + T 100 -10.2 -4.70353 | gap 1, opp_overlap 2552538, overlap 2552533 AAATAGCTAGTAAAA CACGGTCGCCAACAG TAA TTGT-GACGACCGTG TTTTGATTTATTATC TERM 2666 2552569 - 2552538 - T 100 -11.7 -4.31412 | gap 1, opp_overlap 2552538 2552533 AAATAGCTAGTAAAA CACGGTCGCCAACA GTAAT TGT-GACGACCGTG TTTTGATTTATTATC SAV2422 2553047 - 2552580 - | hypothetical protein SAV2423 2553750 - 2553058 - | 6-carboxyhexanoate--CoA ligase SAV2424 2554876 - 2553761 - | 8-amino-7-oxononanoate synthase bioB 2555861 - 2554854 - | biotin synthase bioA 2557221 - 2555863 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase bioD 2557885 - 2557199 - | dethiobiotin synthetase TERM 2667 2558273 - 2558238 - R 100 -15.7 -2.57239 | opp_overlap 2558242, overlap 2558242 AACATCTAAATATAC CAAATCCCCTCACTA TTGCCC TAGTGAGGGGATTTA TTTTGCTGTTGATTA TERM 2668 2558242 - 2558269 + r 100 -14.3 -4.77698 | opp_overlap 2558238 2558242 TCTAAATATACCAAA TCCCCTCACTA TTGCCC TAGTGAGGGGA TTTATTTTGCTGTTG TERM 2669 2558269 - 2558242 - R 100 -14.3 -3.97308 | opp_overlap 2558242, overlap 2558238 TCTAAATATACCAAA TCCCCTCACTA TTGCCC TAGTGAGGGGA TTTATTTTGCTGTTG SAV2428 2560071 - 2558338 - | putative ABC transporter, ATP-binding protein SAV2429 2561859 - 2560096 - | putative ABC transporter, ATP-binding protein TERM 2670 2560137 - 2560151 + g 73 -4.2 -4.84492 | AATCTTTTGTATGCA TGTGCG TAT CCCACA TTTTCTTATAATTAC TERM 2671 2562549 - 2562514 - H 100 -16.4 -2.57239 | opp_overlap 2562518, overlap 2562518 AACATCTAAATACAC CAAATCCCCTCACTAC TGCC ATAGTGAGGGGATTTA TTTAGGTGTTGGTTA TERM 2672 2562545 - 2562518 - H 100 -15 -3.97308 | opp_overlap 2562518, overlap 2562514 TCTAAATACACCAAA TCCCCTCACTAC TGCC ATAGTGAGGGGA TTTATTTAGGTGTTG TERM 2673 2562518 - 2562545 + H 100 -14.3 -4.49906 | opp_overlap 2562518 2562514 TCTAAATACACCAAA TCCCCTCACTA CTGCCA TAGTGAGGGGA TTTATTTAGGTGTTG SAV2430 2562566 - 2562820 + | hypothetical protein SAV2431 2563189 - 2562803 - | hypothetical protein SAV2432 2563457 - 2564599 + | glycerate kinase TERM 2674 2564852 - 2564841 - g 70 -3.6 -4.89477 | TCTTGAAGAAGAAAA CGAG AAAT CCCG CCGTTCAAAAAAATG SAV2433 2564659 - 2565318 + | hypothetical protein TERM 2675 2565351 - 2565409 + F 95 -8.3 -5.37043 | opp_overlap 2565351 ATGATAAACATTAAT TCCCTATACTTTATCTGTATCACTACG TTATT CGTGATGATGCATTAAGAGTATAGGGA TTTTTTATATAAACT SAV2434 2565500 - 2566711 + | bicyclomycin resistance protein TcaB TERM 2676 2566763 - 2566728 - T 77 -9.8 -2.94561 | opp_overlap 2566728 2566731, overlap 2566725 2566731 ACTTCAACATAATTA GAACCCTAGCAAAGAT ATCT ATCTTTGTCGGGGTTC TTCTTTATGAATTAT TERM 2677 2566728 - 2566763 + T 100 -12 -4.11906 | opp_overlap 2566725 2566728 2566731, overlap 2566731 ACTTCAACATAATTA GAACCCTAGCAAAGAT ATCT ATCTTTGTCGGGGTTC TTCTTTATGAATTAT TERM 2678 2566731 - 2566760 + T 77 -7.9 -4.16305 | opp_overlap 2566728 2566725 2566731, overlap 2566728 TCAACATAATTAGAA CCCTAGCAAAGAT ATCT ATCTTTGTCGGGG TTCTTCTTTATGAAT SAV2435 2567307 - 2566834 - | hypothetical protein SAV2436 2567420 - 2568076 + | hypothetical protein TERM 2679 2568098 - 2568068 - T 100 -9.1 -4.96427 | opp_overlap 2568072, overlap 2568064 CAACAACAAAATAAA CACACGTAAGTAA ACACA TTACTCGCGTGTG TAAAACATAAAATGC TERM 2680 2568104 - 2568143 + T 88 -8.8 -4.42743 | gap 1, opp_overlap 2568106 2568111, overlap 2568105 2568106 2568111 CTCGCGTGTGTAAAA CATAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTAAA TTTCTATTATTTGTA TERM 2681 2568105 - 2568142 + T 100 -12.3 -3.24019 | gap 1, opp_overlap 2568106 2568111, overlap 2568104 2568106 2568111 TCGCGTGTGTAAAAC ATAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTAA ATTTCTATTATTTGT TERM 2682 2568106 - 2568141 + T 100 -15.8 -2.52785 | gap 1, opp_overlap 2568106 2568111, overlap 2568105 2568104 2568111 CGCGTGTGTAAAACA TAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTA AATTTCTATTATTTG TERM 2683 2568141 - 2568106 - T 100 -15.8 -3.63744 | gap 1, opp_overlap 2568106 2568105 2568104 2568111, overlap 2568111 CGCGTGTGTAAAACA TAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTA AATTTCTATTATTTG TERM 2684 2568111 - 2568136 + T 100 -11.3 -4.42081 | gap 1, opp_overlap 2568106 2568111, overlap 2568106 2568105 2568104 GTGTAAAACATAAAA TGCGCAAA-CTG GGT CAGGTTTGCGCA TTTTAAATTTCTATT TERM 2685 2568136 - 2568111 - T 100 -11.3 -4.89567 | gap 1, opp_overlap 2568111 2568106 2568105 2568104, overlap 2568106 GTGTAAAACATAAAA TGCGCAAA-CTG GGT CAGGTTTGCGCA TTTTAAATTTCTATT SAV2437 2568945 - 2568139 - | hypothetical protein TERM 2686 2569802 - 2569818 + G 71 -6.6 -4.11623 | opp_overlap 2569817, overlap 2569817 TCAGTCACGGCGGCA TGTTCC CTGGA GGAACA TTTGGTTTCCTAATG TERM 2687 2570321 - 2570331 + G 79 -5.4 -5.04356 | ACGTTACAACGTTAT CAAC TGT GTTG TTTTTAGTTGTTTGG SAV2438 2569231 - 2570640 + | amino acid ABC transporter TERM 2688 2570654 - 2570682 + F 100 -13.3 -5.76949 | AATTTAAACATCTCG CTCTAGTATCAGT TCA ACCGATACTAGAG TTTTTTTTGAAAATA TERM 2689 2571863 - 2571873 + G 74 -6.8 -4.31433 | CACCACCTTCTCGTG TGCG TTA CGCA TTTATTATGACGATG TERM 2690 2572175 - 2572161 - g 82 -4.3 -5.41787 | TAAAAAAGACAAAAA CGATA CAAAT TATCG CCCAGTATTAAACCA TERM 2691 2572530 - 2572546 + G 81 -8.1 -4.21933 | TCAAAAAATTATGCG TATTGTG AAT CACAATA TTATTTTACGCTTAA SAV2439 2570779 - 2572857 + | Na_ antiporter-like protein TERM 2692 2572922 - 2572875 - T 82 -10.8 -2.72916 | opp_overlap 2572876, overlap 2572874 2572872 AAGACATAACAATAC CCCCCATACATATGAGACAA AGTCATTA TCATCTCATATGTACGGGGT TTTTATATTCAACAT TERM 2693 2572876 - 2572921 + T 90 -7.7 -5.0916 | opp_overlap 2572875 2572874 2572872 AGACATAACAATACC CCCCATACATATGAGACAA AGTCATTA TCATCTCATATGTACGGGG TTTTTATATTCAACA TERM 2694 2572945 - 2572983 + T 100 -16.3 -4.00124 | opp_overlap 2572945 TTCAACATCAAAAAA TCGGATTGATGAAAAGT AAATA ACCTTTCATCAATCCGA TTTGATTATAGAATC TERM 2695 2572983 - 2572945 - T 100 -18.5 -5.27779 | opp_overlap 2572945 TTCAACATCAAAAAA TCGGATTGATGAAAAGT AAATA ACCTTTCATCAATCCGA TTTGATTATAGAATC SAV2440 2574827 - 2572998 - | hypothetical protein SAV2441 2575059 - 2576555 + | fmtA-like protein TERM 2696 2576563 - 2576615 + T 81 -7.2 -4.65458 | gap 2, opp_overlap 2576563 AGACATAATAAAAAA GACTTGTTCGAGCCGTGCGTTTGATA ATA TATCAT-C-CACGATTCGACCAAGTC TTTATTCTTTGTATA TERM 2697 2576615 - 2576563 - T 90 -7.2 -5.62045 | gap 2, opp_overlap 2576563 AGACATAATAAAAAA GACTTGTTCGAGCCGTGCGTTTGATA ATA TATCAT-C-CACGATTCGACCAAGTC TTTATTCTTTGTATA SAV2442 2577498 - 2576647 - | dTDP-glucose 4,6-dehydratase TERM 2698 2577734 - 2577694 - R 81 -5.5 -5.20534 | ATCAATCAAGAAAAA CAGCACCAAGATCATTTCA ATT TGAAAGTACCTTACTGCTG TTCTTTATTTATTAC SAV2443 2578755 - 2577820 - | 2-dehydropantoate 2-reductase SAV2444 2580381 - 2578981 - | integral membrane efflux protein TERM 2699 2580440 - 2580418 - R 70 -3.6 -5.05606 | TTTAAGAAAAACAAA TTTTTAATAT GAT ATATTAAGAA ACAATATCATAAATT TERM 2700 2580620 - 2580585 - R 100 -9.9 -4.93318 | opp_overlap 2580585 2580583 2580612 CACAACCTATAAAAA GGCTACTCAAAGA TTATTTGAGC TCCTTGAGTAGCC TCATTTTTTATAAAT TERM 2701 2580585 - 2580620 + r 71 -7.7 -3.45403 | opp_overlap 2580585, overlap 2580583 2580612 CACAACCTATAAAAA GGCTACTCAAAGA TTATTTGAGC TCCTTGAGTAGCC TCATTTTTTATAAAT TERM 2702 2580612 - 2580623 + r 75 -4.4 -5.28778 | opp_overlap 2580585, overlap 2580585 2580583 ATTATTTGAGCTCCT TGAG TAGC CTCA TTTTTTATAAATCAT opuCD 2581370 - 2580675 - | glycine betaine/carnitine/choline ABC transporter opuCC 2582311 - 2581370 - | glycine betaine/carnitine/choline ABC transporter opuCB 2582963 - 2582328 - | glycine betaine/carnitine/choline ABC transporter opuCA 2584192 - 2582960 - | glycine betaine/carnitine/choline ABC transporter TERM 2703 2584593 - 2584565 - R 71 -7.7 -3.46106 | overlap 2584563 CGAAAATGTGAAATA TTATTACAAAAGT CGA ATTTTTGTAATAA TGCACACGCATCCAT TERM 2704 2584804 - 2584779 - R 100 -10.5 -5.51402 | opp_overlap 2584779 ACACACCTAAAAAAA CAACCAACAGC ATGA GCCATTGGTTG TTTCGTGTCATCTTG SAV2449 2585455 - 2584856 - | hypothetical protein SAV2450 2585635 - 2587272 + | amino acid transporter TERM 2705 2587321 - 2587349 + F 81 -2.5 -5.79595 | gap 1, opp_overlap 2587321 ACACACACACATTAA CCAACCATTGAT TTCAAC ATCT-TGGTTGG TTTTTTATTTTGAAA TERM 2706 2587974 - 2587958 - g 74 -5.9 -4.48072 | opp_overlap 2587958 ACATTTAGTACAAAA TAACGAC ATT ATCGTTA TTACATGCAATTATC TERM 2707 2588742 - 2588762 + G 81 -7.7 -4.4078 | CACTATCGCAGTGCT TACCATATT CTA GATATGGTA TTTTGGTTCGGAAAC SAV2451 2587581 - 2588933 + | para-nitrobenzyl esterase chain A TERM 2708 2588980 - 2588953 - T 81 -6.3 -5.09225 | opp_overlap 2588953 ATCGCATCTAAAAAA GCACACCTG AATTTGATAG CAGGCGTGC TTTTCATATGAGAAT SAV2452 2590182 - 2588995 - | chloramphenicol resistance protein TERM 2709 2590261 - 2590249 - R 81 -6.3 -5.1675 | opp_overlap 2590249 2590248 CGATTTATTAAAAAA TGTGT GCA ACACA ATTTTATATATAACC TERM 2710 2590474 - 2590423 - R 100 -9.7 -5.01732 | gap 1, opp_overlap 2590422 2590423 AATGTCTTCAAAAAA GCACGCACGCTTTATATGTCAG AACAGATAA CTGAC-TACAAAGTATGCGTGC CTTTATGAATATTTT SAV2453 2591354 - 2590578 - | hypothetical protein TERM 2711 2590748 - 2590735 - G 73 -8.1 -3.54459 | TTAATCGCTTGTAAA GGTGG TACG CCACC AATAATTAAGCCTGT SAV2454 2592009 - 2591347 - | ABC transporter ATP-binding protein SAV2455 2593333 - 2592257 - | endo-1,4-beta-glucanase TERM 2712 2593628 - 2593586 - R 79 -5.7 -5.1417 | gap 1 TTATAAAATTAAAAA GTGTAGAGATAACAACG-CA TTAA CGTCGCTATTTTCCCTACAC TTAAATACTAGTTTC SAV2456 2593954 - 2593688 - | hypothetical protein SAV2457 2594211 - 2593954 - | hypothetical protein SAV2458 2594570 - 2595025 + | hypothetical protein TERM 2713 2595091 - 2595041 - T 75 -4.9 -5.1523 | gap 2, opp_overlap 2595042, overlap 2595042 TTTATAACATAAAAA TGCCCTCAGA-TAAG-ACTAAGGAT ACA AACCTTAATTCATATTCTGAGGGCT TTAATATTTGAAATT TERM 2714 2595090 - 2595042 - T 74 -8.4 -3.68053 | gap 2, opp_overlap 2595042, overlap 2595041 TTATAACATAAAAAT GCCCTCAGA-TAAG-ACTAAGGAT ACA AACCTTAATTCATATTCTGAGGGC TTTAATATTTGAAAT SAV2459 2596770 - 2595193 - | glutamate synthase (ferredoxin) TERM 2715 2596846 - 2596872 + H 75 -4.6 -5.10154 | ACAATGGAAGCGCTT CATTTTATAAAA CAA TTTTATGATATG TTTTTCATTTTAAAT SAV2460 2596965 - 2597714 + | hypothetical protein TERM 2716 2597756 - 2597797 + T 100 -11.8 -4.48299 | opp_overlap 2597756 CATACACATCAAAAA GCACACTTAAAAGTCAGT ATCACA ACTCACTTTTAAGCGTGC TTTATTTAGATATAC TERM 2717 2597797 - 2597756 - T 100 -14 -4.86133 | opp_overlap 2597756 CATACACATCAAAAA GCACACTTAAAAGTCAGT ATCACA ACTCACTTTTAAGCGTGC TTTATTTAGATATAC SAV2461 2597988 - 2597863 - | hypothetical protein TERM 2718 2597912 - 2597924 + g 88 -7.7 -5.1925 | opp_overlap 2597911 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SAV2462 2599269 - 2598076 - | antibiotic resistance protein TERM 2719 2598545 - 2598526 - G 76 -6.4 -4.59773 | CTGTATTGTCAAAAA GATTCCCG CATT CGCGAATC CTAAACTCACTGTGT SAV2463 2600030 - 2599281 - | oligopeptide transporter ATPase subunit SAV2464 2600838 - 2600023 - | oligopeptide transporter ATPase subunit SAV2465 2601704 - 2600835 - | oligopeptide transporter permease TERM 2720 2601212 - 2601198 - G 79 -8.6 -3.72893 | GATTGTTTTAGCAAA TCTGAC ATG GTCAGA AGCAGTGTACTGCAT SAV2466 2602636 - 2601701 - | oligopeptide transporter permease TERM 2721 2602251 - 2602214 - G 85 -9.3 -3.93583 | gap 1, opp_overlap 2602213 2602214, overlap 2602218 TAATGCAGTTAGAAA GAAAGC-CACTGAACGTA TCG CACGATCAGTGAACTTTC CTCTTTTTAATGCAC SAV2467 2604247 - 2602649 - | oligopeptide transporter substrate binding protein TERM 2722 2602777 - 2602793 + g 70 -3.7 -4.84761 | opp_overlap 2602780, overlap 2602780 AGATACCTTCATCAT CAATTTG TTT CAAAATG TTTTTATAAGCGTCT SAV2468 2605691 - 2604390 - | hypothetical protein TERM 2723 2604631 - 2604648 + g 73 -4.2 -4.87786 | GGCATTCTTGGAATT TGAACA ACATCC TGTTCA TTTTTATAGACTTGC TERM 2724 2605554 - 2605568 + g 80 -6.4 -4.82678 | TTTCTCTTTTTTATA CGCTTG ATA TAAGCG TTTTGATTTTTCTGA SAV2469 2606502 - 2605684 - | hypothetical protein SAV2470 2607334 - 2606513 - | hypothetical protein TERM 2725 2607609 - 2607640 + r 74 -8.8 -3.23538 | gap 1, opp_overlap 2607609, overlap 2607597 CCATCTATTAGGTAA GTCATGCTAATCCGC ATA GTGGAA-AGCATGAC TTAGTAATCGGTTGT TERM 2726 2607796 - 2607820 + r 77 -8.7 -3.6018 | opp_overlap 2607797 2607801, overlap 2607797 2607801 AAAAAGTTGCAGAAA ACAAATCGTAA CTA TTACGATTTGA TTATATACTATATTA TERM 2727 2607819 - 2607797 - R 100 -12.2 -4.41844 | opp_overlap 2607796 2607797 2607801, overlap 2607801 AAAAGTTGCAGAAAA CAAATCGTAA CTA TTACGATTTG ATTATATACTATATT TERM 2728 2607797 - 2607819 + r 100 -12.2 -2.75385 | opp_overlap 2607797 2607801, overlap 2607796 2607801 AAAAGTTGCAGAAAA CAAATCGTAA CTA TTACGATTTG ATTATATACTATATT TERM 2729 2607815 - 2607801 - R 82 -7.2 -4.77173 | opp_overlap 2607797 2607796 2607801, overlap 2607797 GTTGCAGAAAACAAA TCGTAA CTA TTACGA TTTGATTATATACTA TERM 2730 2607801 - 2607815 + r 75 -7.2 -4.05245 | opp_overlap 2607801 2607797, overlap 2607797 2607796 GTTGCAGAAAACAAA TCGTAA CTA TTACGA TTTGATTATATACTA TERM 2731 2607988 - 2607958 - R 100 -10.6 -5.99154 | opp_overlap 2607958 2607961 TATCAAACAAAAAAA CCAGCTTCAACGTA AAA TACGTTAAAACTAG CTTTAAGCAATACAC SAV2471 2608791 - 2608024 - | hypothetical protein SAV2472 2609709 - 2608891 - | short chain dehydrogenase TERM 2732 2610300 - 2610312 + G 71 -3.3 -5.0925 | GATTTCTGTTGTGAA TCGCG CAC CACGA TTTTTAATTTTACCG SAV2473 2609944 - 2611482 + | aminobenzoyl-glutamate transport protein TERM 2733 2611506 - 2611545 + T 74 -6.5 -4.3767 | opp_overlap 2611509, overlap 2611507 2611509 AAAGGGATAAATTAA AAATGCCACTATACAAG ATTTGA CCTGTATAGTGGCATGA TTTGTTATGATATAG TERM 2734 2611507 - 2611544 + T 80 -10 -3.21879 | opp_overlap 2611509, overlap 2611506 2611509 AAGGGATAAATTAAA AATGCCACTATACAAG ATTTGA CCTGTATAGTGGCATG ATTTGTTATGATATA TERM 2735 2611509 - 2611542 + T 100 -12.6 -3.16079 | opp_overlap 2611509, overlap 2611507 2611506 GGGATAAATTAAAAA TGCCACTATACAAG ATTTGA CCTGTATAGTGGCA TGATTTGTTATGATA TERM 2736 2611542 - 2611509 - T 100 -14.8 -5.04601 | opp_overlap 2611507 2611506 2611509 GGGATAAATTAAAAA TGCCACTATACAAG ATTTGA CCTGTATAGTGGCA TGATTTGTTATGATA SAV2474 2612017 - 2611595 - | hypothetical protein TERM 2737 2612484 - 2612458 - R 79 -5.9 -5.02715 | opp_overlap 2612462, overlap 2612462 AGATTAAATCAAAAA TAAAGAAGACC CTAGT GGCCTTCTTTT TTGTCTAATTCTTCT TERM 2738 2612462 - 2612480 + r 81 -4.5 -5.42131 | opp_overlap 2612458 2612462 TAAATCAAAAATAAA GAAGACC CTAGT GGCCTTC TTTTTTGTCTAATTC TERM 2739 2612480 - 2612462 - R 82 -6.7 -5.00388 | opp_overlap 2612462, overlap 2612458 TAAATCAAAAATAAA GAAGACC CTAGT GGCCTTC TTTTTTGTCTAATTC SAV2475 2612888 - 2612469 - | hypothetical protein SAV2476 2613325 - 2612915 - | hypothetical protein TERM 2740 2613579 - 2613601 + r 74 -6.3 -4.43351 | gap 1, opp_overlap 2613579, overlap 2613576 AAAACAAAATTAAAA CGGCCGCATA GTTT TA-GCGGTCG TTCTTTTTAGACTCT SAV2477 2614104 - 2613592 - | hypothetical protein SAV2478 2614959 - 2614264 - | oxidoreductase SAV2479 2615248 - 2615529 + | hypothetical protein TERM 2741 2615621 - 2615644 + T 85 -8.1 -4.39287 | opp_overlap 2615610 2615621 ATAAGTATGACTAAA GCCACATCC AATATA GGACGTGGC TTTTAGTATCGTTCC TERM 2742 2615644 - 2615621 - T 89 -10.3 -3.82433 | opp_overlap 2615621, overlap 2615610 ATAAGTATGACTAAA GCCACATCC AATATA GGACGTGGC TTTTAGTATCGTTCC SAV2480 2615980 - 2615789 - | hypothetical protein TERM 2743 2616256 - 2616209 - R 100 -12.4 -4.39166 | gap 1, opp_overlap 2616209 CTTTAGACATTAAAA GCTTCTAACATGATAC-GGAA TATGAGG TTCCTGTATCACATTAGAAGC TTTTTTGTTGCGGTG TERM 2744 2616209 - 2616256 + r 100 -8.7 -5.46657 | gap 1, opp_overlap 2616209 CTTTAGACATTAAAA GCTTCTAACATGATAC-GGAAT ATGAG GTTCCTGTATCACATTAGAAGC TTTTTTGTTGCGGTG SAV2481 2617335 - 2616541 - | hypothetical protein TERM 2745 2617232 - 2617246 + g 77 -5.6 -4.98911 | AATGTGTCTTTAATT TGGGCG TTT CGACCA TTTGTTTTTGTCATA TERM 2746 2617731 - 2617701 - R 100 -7.8 -6.04324 | opp_overlap 2617700 CCAAAAAATAAAAAA GAAGTTAAACAA AGATTGG TTGCTTAACTTC CATTATTGAATTCAT TERM 2747 2617791 - 2617779 - R 82 -7.7 -4.41633 | opp_overlap 2617778 2617779, overlap 2617776 GATCCCGAAAAATAA TGGCT AAT AGCCA CTTATAGTCGAGATT SAV2482 2618158 - 2617871 - | hypothetical protein SAV2483 2618487 - 2618161 - | hypothetical protein TERM 2748 2618405 - 2618427 + g 84 -6.4 -5.12172 | opp_overlap 2618399 2618404, overlap 2618408 CTTAATTCATCAATT TGATTGAATG CAT CATTCAATTG TTTTCTTTCTTCATC TERM 2749 2618408 - 2618424 + g 84 -8.1 -4.62561 | opp_overlap 2618399 2618404, overlap 2618405 AATTCATCAATTTGA TTGAATG CAT CATTCAA TTGTTTTCTTTCTTC SAV2484 2619812 - 2618487 - | hypothetical protein TERM 2750 2618684 - 2618701 + g 75 -8.5 -3.35832 | opp_overlap 2618687, overlap 2618683 2618687 TTCTTAATTCATCTA TAACCTC TTCA GAGGTTA ATTTTTCACCAATTT SAV2485 2620593 - 2619799 - | hypothetical protein TERM 2751 2619970 - 2619984 + g 70 -3.6 -4.84262 | overlap 2619971 AGGTGCCCTTTTGGT TGATAT ATC ATATCG TTTTCTTAATTGTTG TERM 2752 2620456 - 2620480 + g 77 -8.8 -3.62354 | opp_overlap 2620458 2620460, overlap 2620454 2620449 ATTCTTGGTTGGATA CACATTTAAT GTTTG ATTAAATGTG TCTTTAATTTGGGCA TERM 2753 2620670 - 2620658 - R 71 -4.9 -4.83759 | AACTAAAGCGAAAAA TTGTT TTG AACAA ATGAATTTAATTGTA SAV2486 2621610 - 2620837 - | hypothetical protein SAV2487 2622498 - 2621722 - | hypothetical protein SAV2488 2624292 - 2622802 - | DNA or RNA helicases of superfamily II (truncated) SAV2489 2625663 - 2624332 - | putative helicase (truncated) TERM 2754 2625538 - 2625553 + g 76 -2.6 -5.39905 | TTCATCTATAATTGT TGAAAG GACT TTTTCA TTTTTATTATTTACT SAV2490 2626057 - 2625665 - | mutator protein mutT TERM 2755 2626038 - 2626024 - G 76 -3.6 -5.31275 | TGTTATCAGAAAAAA TAATAG CTC CTACTA CATTGATTACTTTTT TERM 2756 2627029 - 2627051 + G 72 -9.2 -2.66106 | overlap 2627028 2627025 TTCACTAGTTTGCAT GGTACAAGTG TTC CAATTGTACC TGAGTTATTAAAATC SAV2491 2626246 - 2627997 + | phosphomannomutase SAV2492 2628281 - 2628547 + | hypothetical protein SAV2493 2628691 - 2628999 + | hypothetical protein TERM 2757 2629095 - 2629068 - T 100 -8.6 -5.40072 | opp_overlap 2629068, overlap 2629070 TGTTTGCGAAAAAAA TACAACCTTGTA CGAA TACAAAGTTGCA TTAATATAGAATCAT TERM 2758 2629093 - 2629070 - T 84 -9 -4.34482 | opp_overlap 2629068, overlap 2629068 TTTGCGAAAAAAATA CAACCTTGTA CGAA TACAAAGTTG CATTAATATAGAATC SAV2494 2629340 - 2629107 - | hypothetical protein SAV2495 2630513 - 2629437 - | hypothetical protein TERM 2759 2630811 - 2630767 - R 84 -6.6 -5.21236 | gap 1, opp_overlap 2630767 2630769 2630772 AATTTATAACAAAAA TACACCCCTTAAAGTTAGGTC TTTC AATCCAACTTTT-GGGGTGTA TATCATTCTCATCAT TERM 2760 2630889 - 2630903 + r 70 -5.8 -4.30719 | opp_overlap 2630888 TATTATTTAAATTAT GAATTA TTT TAATTC TTTCTTCTACGAGCC SAV2496 2631487 - 2630897 - | hypothetical protein TERM 2761 2631186 - 2631199 + g 70 -4.5 -4.65153 | TTCTCTGGGTTTTCA GGTCC TTTT GGATC TTTTGGTTTCTCTCC TERM 2762 2631407 - 2631420 + g 77 -3.1 -5.40464 | opp_overlap 2631393 ACGTTTTGTTTCAAA CGGTA TCTC TACTG TTTTTGTTTCTGGTG TERM 2763 2631671 - 2631683 + r 71 -3.4 -5.27779 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGC TERM 2764 2632055 - 2632067 + r 71 -3.4 -5.27779 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGC TERM 2765 2632439 - 2632451 + r 71 -3.4 -5.28683 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGT TERM 2766 2632823 - 2632835 + r 71 -3.4 -5.28683 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGT SAV2497 2634243 - 2632909 - | accumulation-associated protein (truncated) TERM 2767 2633589 - 2633602 + g 72 -2.5 -5.32944 | AATTGAAATCCTTAC TAAAA TCTA TTTTA TTTTTTAATTGTAAA TERM 2768 2633675 - 2633689 + g 78 -2.1 -5.76633 | GTTACCTCTGATACC CCTAA ATCTG TTGGG TTTTTTTGTATATCA TERM 2769 2634409 - 2634391 - R 71 -7.6 -3.51545 | opp_overlap 2634391, overlap 2634384 TAAAACAATCTACAA CTAAAAAT ATT ATTTTTAG TTTTCAATGAATAAT TERM 2770 2634391 - 2634409 + r 79 -7.6 -4.20084 | opp_overlap 2634391 2634384 TAAAACAATCTACAA CTAAAAAT ATT ATTTTTAG TTTTCAATGAATAAT TERM 2771 2634527 - 2634486 - R 83 -3.2 -5.79595 | TTCTAAAATAAAAAA TACCTTAACGCATTTAAA AATACA TTTAACTGCACCAAGATA TTAAAATCTCGAAAC TERM 2772 2634538 - 2634556 + r 71 -9 -2.73513 | opp_overlap 2634536 2634542, overlap 2634537 2634542 AGATATTAAAATCTC GAAACATA CTT TATGTTTC ATTAATATTTATTTC sarH3 2634907 - 2634548 - | accessory regulator A-like protein sarH2 2635228 - 2635971 + | accessory regulator A-like protein gtaB 2637048 - 2636182 - | UTP-glucose-1-phosphate uridyltransferase TERM 2773 2637224 - 2637254 + r 72 -4.7 -4.9041 | gap 1 GAGTTTTTATTATTA GGCGGCC-AGTCCA TTAT TGGGCTTGGTTGTC TTCTTTTTTTCTCCT tnp 2638540 - 2637221 - | transposase TERM 2774 2638641 - 2638620 - R 82 -4.4 -5.52384 | overlap 2638623 TGTGTATTAAAAAAA GCAGGAAG TTTTAC CTTCCCAC CATAAAATATGAAGA TERM 2775 2638733 - 2638699 - R 100 -11.7 -5.47399 | opp_overlap 2638699 TTAATTTTAAAAAAA CAGGTTTACTTCATA TAATT TATGAAATAAACCCG TCAATTTTTGTTTAA fnbB 2641634 - 2638749 - | fibronectin-binding protein TERM 2776 2639910 - 2639937 + g 83 -8 -4.39568 | gap 1, opp_overlap 2639918, overlap 2639918 TGTATCCTCTTCATA TTCAACAACATCA GCG TGATGTT-TTGAA TTTTCATGTGTAGAT TERM 2777 2639918 - 2639930 + g 74 -6.3 -4.44277 | opp_overlap 2639918, overlap 2639910 CTTCATATTCAACAA CATCA GCG TGATG TTTTGAATTTTCATG TERM 2778 2642299 - 2642265 - R 100 -11.7 -5.53288 | opp_overlap 2642265 TTTAATCTAAAAAAA CAGGTTTACTTCATA TAATT TATGAAATAAACCCG TCAATTTTTGTTTAA fnb 2645431 - 2642315 - | fibronectin-binding protein TERM 2779 2643560 - 2643587 + g 83 -8 -4.39568 | gap 1, opp_overlap 2643568, overlap 2643568 TGTATCCTCTTCATA TTCAACAACATCA GCG TGATGTT-TTGAA TTTTCATGTGTCGAT TERM 2780 2643568 - 2643580 + g 74 -6.3 -4.44277 | opp_overlap 2643568, overlap 2643560 CTTCATATTCAACAA CATCA GCG TGATG TTTTGAATTTTCATG TERM 2781 2644717 - 2644695 - G 73 -9.4 -2.85508 | overlap 2644692 GAAACCCCATAAGTA TTTACATTAT TTG ATAATGTAAA ATCAAAATAATCTCC SAV2504 2645766 - 2645566 - | hypothetical protein TERM 2782 2645621 - 2645646 + g 76 -2.7 -5.4111 | gap 1, opp_overlap 2645625 2645626, overlap 2645622 2645625 2645626 GTATTCAAGTCATCA TA-AACCCTTGT CAC ACAAGGCTTGTA TTTTTTATACTTATT TERM 2783 2645640 - 2645626 - G 71 -8.6 -2.99161 | opp_overlap 2645625 2645622 2645621 2645626, overlap 2645625 CAAGTCATCATAAAC CCTTGT CAC ACAAGG CTTGTATTTTTTATA TERM 2784 2645626 - 2645640 + g 71 -8.6 -3.12405 | opp_overlap 2645626 2645625, overlap 2645625 2645622 2645621 CAAGTCATCATAAAC CCTTGT CAC ACAAGG CTTGTATTTTTTATA TERM 2785 2645887 - 2645840 - R 100 -10.2 -4.82901 | opp_overlap 2645839 2645840 2645844, overlap 2645844 TTTTCTGCATAAAAA TAAACGTGTTTCAAGGCAAT ATATTGCA ATTACCTAAAAACACGTTTA CTTAATATTTAGTTA TERM 2786 2645883 - 2645844 - R 82 -6.6 -4.96501 | opp_overlap 2645840 2645839 2645844, overlap 2645840 CTGCATAAAAATAAA CGTGTTTCAAGGCAAT ATATTGCA ATTACCTAAAAACACG TTTACTTAATATTTA gntP 2647258 - 2645900 - | gluconate permease gntK 2648928 - 2647375 - | gluconokinase gntR 2649632 - 2648952 - | gluconate operon transcriptional repressor TERM 2787 2649656 - 2649675 + r 78 -9.4 -3.35176 | opp_overlap 2649653 2649656 2649658 2649660 TCCTTCATTACATGA CATACTTG TATA CAAGTATG TTAATATAGTTCTTA TERM 2788 2649675 - 2649656 - R 73 -9.4 -2.66316 | opp_overlap 2649656, overlap 2649653 2649658 2649660 TCCTTCATTACATGA CATACTTG TATA CAAGTATG TTAATATAGTTCTTA SAV2508 2650549 - 2649785 - | MerR family transcription regulator SAV2509 2651406 - 2650714 - | hypothetical protein SAV2510 2652125 - 2651637 - | hypothetical protein SAV2511 2654015 - 2652192 - | hypothetical protein TERM 2789 2654482 - 2654450 - R 81 -6.3 -5.15969 | TTTCAACGTAAAAAA GCAATAAGCCCCAAC AAT GTGAAAGCTTACTGC TTGTTTAAATTATTT SAV2512 2655769 - 2654492 - | glucarate transporter SAV2513 2656316 - 2656927 + | alkaline phosphatase TERM 2790 2656977 - 2657014 + F 73 -3.6 -5.25805 | gap 1, opp_overlap 2656977 TTCTATACACAAAAA GCAGTAAAATCATTCCA TCTAT TGAAATGATTC-ACTGC TTTTTTAAGTTTATT TERM 2791 2657014 - 2656977 - f 90 -8 -5.03994 | gap 1, opp_overlap 2656977 TTCTATACACAAAAA GCAGTAAAATCATTCCA TCTAT TGAAATGATT-CACTGC TTTTTTAAGTTTATT SAV2514 2657445 - 2658140 + | transport protein SAV2515 2658142 - 2658912 + | transmembrane protein smpB TERM 2792 2658977 - 2659004 + F 85 -4.8 -5.61596 | opp_overlap 2658977 AAAATCATTTTCAAA TCCCTTCACC CAAATAAT GGTGCGGGGA TTTTTTTATCCAAAT TERM 2793 2660527 - 2660543 + G 75 -8.1 -3.85704 | AAAGGTTCGCTTTAC TTACCAT ATA ATGGTAA TTTACTCATTCATGG TERM 2794 2661202 - 2661190 - g 71 -7.7 -3.61328 | ACCAATATTGGTAAA GAGCT TCA AGCTC AAATAGATATTTTGA fbp 2659285 - 2661249 + | fructose-bisphosphatase TERM 2795 2661355 - 2661383 + F 100 -16.9 -3.36655 | opp_overlap 2661355, overlap 2661380 CTACACCGAAAAAAA TCCCCTCACTATT GCG AGTAGTGAGGGGA TTGGTGTATCTATGC TERM 2796 2661383 - 2661355 - f 100 -14.7 -5.50499 | opp_overlap 2661355 2661380 CTACACCGAAAAAAA TCCCCTCACTATT GCG AGTAGTGAGGGGA TTGGTGTATCTATGC TERM 2797 2661519 - 2661507 - f 71 -4.9 -4.72029 | opp_overlap 2661507 TTCAATTTAACAAAA TACTA TAT TAGTA CTATATTTTTCATTA TERM 2798 2662022 - 2662034 + G 88 -7.7 -4.87893 | AATTGCTGTGCTTGG TGGAG TTA CTCCA TTTTTAATTGCAATT SAV2517 2661591 - 2662670 + | hypothetical protein TERM 2799 2662720 - 2662759 + T 100 -12.4 -3.72324 | gap 1, opp_overlap 2662720 TTCAAAATCAAAAAA GCGGGCAGATG-AAAAG TAAAAAT CTTTTCCATCTGTCCGC TTCTTAATAGAACTG TERM 2800 2662759 - 2662720 - T 100 -10.2 -5.46698 | gap 1, opp_overlap 2662720 TTCAAAATCAAAAAA GCGGGCAGATG-AAAAG TAAAAAT CTTTTCCATCTGTCCGC TTCTTAATAGAACTG SAV2518 2663368 - 2662775 - | phospholipase/carboxylesterase family protein SAV2519 2664358 - 2663399 - | glyoxylase family protein TERM 2801 2664391 - 2664408 + r 85 -8.5 -4.37534 | TATTTTTAGTGTATT TATCTCG AAAT CGAGATA TTTTAATGTAAATTT SAV2520 2664870 - 2664436 - | MarR family transcription regulator SAV2521 2665096 - 2665380 + | hypothetical protein TERM 2802 2665390 - 2665413 + F 100 -13.2 -5.46657 | opp_overlap 2665388 GGTTAAATAAATTTT GCGATGGTGC AACT GTACCATCGC TTTTTTGTTCGCATC SAV2522 2665551 - 2666357 + | hypothetical protein TERM 2803 2666396 - 2666424 + T 95 -6.8 -5.84381 | gap 1, opp_overlap 2666397, overlap 2666389 2666397 TTTTTTCACGCAAAA ACCTGCGATT-CA TTTA TGTAATCGCAGGC TTTTTTTATTGCTAA TERM 2804 2666397 - 2666423 + T 95 -10.3 -4.09002 | gap 1, opp_overlap 2666397, overlap 2666389 2666396 TTTTTCACGCAAAAA CCTGCGATT-CA TTTA TGTAATCGCAGG CTTTTTTTATTGCTA TERM 2805 2666423 - 2666397 - T 100 -10.3 -4.65895 | gap 1, opp_overlap 2666389 2666397 2666396 TTTTTCACGCAAAAA CCTGCGATT-CA TTTA TGTAATCGCAGG CTTTTTTTATTGCTA SAV2523 2667149 - 2666478 - | NAD(P)H-flavin oxidoreductase TERM 2806 2667700 - 2667689 - g 76 -4.4 -5.09895 | GATTTAGCTAAAAAA CACA ACAT TGTG ATATCTAACGTTCCT ddh 2667356 - 2668411 + | D-lactate dehydrogenase TERM 2807 2668419 - 2668455 + T 100 -16.1 -5.07523 | opp_overlap 2668425, overlap 2668425 TAAATTAATATATAT TTAAAAGCAAAGGCGCA CCA TGTGCCTTTGCTTTTTA TTTTGTTTATCTGTA TERM 2808 2668449 - 2668425 - T 100 -12.9 -4.27861 | opp_overlap 2668419 2668425 AATATATATTTAAAA GCAAAGGCGCA CCA TGTGCCTTTGC TTTTTATTTTGTTTA TERM 2809 2668425 - 2668449 + T 100 -15.1 -5.67711 | opp_overlap 2668425, overlap 2668419 AATATATATTTAAAA GCAAAGGCGCA CCA TGTGCCTTTGC TTTTTATTTTGTTTA SAV2525 2669458 - 2668658 - | hypothetical protein SAV2526 2669778 - 2670413 + | ABC transporter ATP-binding protein TERM 2810 2670587 - 2670601 + G 76 -2.8 -5.4593 | AGTTCTTATACAGTT GCCA CTGAATT TGGC TTTTTATTATTTTCA SAV2527 2670428 - 2671150 + | hypothetical protein TERM 2811 2671161 - 2671183 + T 81 -5.5 -5.28561 | opp_overlap 2671162, overlap 2671162 TGTAGTACATAAAAA AGAGCGGCA TCCAT TGTCGCTCC TTTTTATTATGTATT TERM 2812 2671162 - 2671182 + T 80 -9 -3.74697 | opp_overlap 2671162, overlap 2671161 GTAGTACATAAAAAA GAGCGGCA TCCAT TGTCGCTC CTTTTTATTATGTAT TERM 2813 2671182 - 2671162 - T 89 -6.8 -5.39721 | opp_overlap 2671162 2671161 GTAGTACATAAAAAA GAGCGGCA TCCAT TGTCGCTC CTTTTTATTATGTAT TERM 2814 2671255 - 2671274 + T 70 -6.4 -4.15006 | opp_overlap 2671255 CACCAAACAAAAAAA CAGTCTCG CAAT CAAGACTG TTTTCCACTCAATAT TERM 2815 2671274 - 2671255 - T 100 -8.6 -5.99154 | opp_overlap 2671255 CACCAAACAAAAAAA CAGTCTCG CAAT CAAGACTG TTTTCCACTCAATAT TERM 2816 2671295 - 2671311 + T 81 -8.1 -4.03769 | opp_overlap 2671291 CACTCAATATATTCA TCCATTA GCG TAATGGA TTATTTGACTTCTGT srtA 2671932 - 2671312 - | sortase TERM 2817 2672170 - 2672158 - g 73 -7.7 -3.83768 | AAAAGAAGATTTAAA CGCTA TAT TAGCG ATATACAACGATGCC SAV2529 2672126 - 2672617 + | N-acetyltransferase TERM 2818 2672705 - 2672724 + T 86 -6.4 -5.37593 | ACTATAAACCTCTTA GGGACAAT TTAC ATCGTCCC TTTTTTCATTTCAAA TERM 2819 2673089 - 2673032 - T 100 -15.1 -3.76492 | opp_overlap 2673041, overlap 2673044 TTCAACTTTATGAAA GATAATTAAGAAGCATCTATCTGGTAC TAAT GATCCAGACAGATGCTTCTTTTTTATC AATATCTTATTGTTA TERM 2820 2673041 - 2673080 + T 100 -12.2 -5.29782 | opp_overlap 2673032 2673044 ATGAAAGATAATTAA GAAGCATCTATCTGGTAC TAAT GATCCAGACAGATGCTTC TTTTTTATCAATATC TERM 2821 2673077 - 2673044 - T 93 -10.3 -3.90608 | opp_overlap 2673041, overlap 2673032 AAAGATAATTAAGAA GCATCTATCTGGTAC TAAT GATCCAGACAGATGC TTCTTTTTTATCAAT SAV2530 2674009 - 2673110 - | putative L-serine dehydratase SAV2531 2674703 - 2674023 - | putative beta-subunit of L-serine dehydratase SAV2532 2675749 - 2674706 - | regulatory protein pfoR SAV2533 2676299 - 2676502 + | hypothetical protein TERM 2822 2676828 - 2676853 + G 77 -5.5 -4.84262 | gap 1, overlap 2676814 TGTCGATTGGTACGT CACTGCTCGACT TGT AGTC-AGTGGTG TTTTCTTACTTATTA SAV2534 2676694 - 2677620 + | EamA family protein SAV2535 2678669 - 2677701 - | hypothetical protein SAV2536 2679146 - 2678790 - | hypothetical protein SAV2537 2679598 - 2679188 - | hypothetical protein TERM 2823 2679882 - 2679855 - R 100 -14.3 -4.7254 | opp_overlap 2679855 ATTGCGCACTAAAAA GGCAGTAGCTT CATTTT AAGCTACTGCC TTTTGTAACGTATTC TERM 2824 2679855 - 2679882 + r 100 -14.3 -4.42619 | opp_overlap 2679855 ATTGCGCACTAAAAA GGCAGTAGCTT CATTTT AAGCTACTGCC TTTTGTAACGTATTC ptsG 2682044 - 2679978 - | PTS system, glucose-specific II ABC component TERM 2825 2681874 - 2681895 + g 83 -5.9 -5.03715 | opp_overlap 2681879 TGCTTCCATGACCGA CGAAATCAT TACA ATGATATCG TTTTTTAACCATGGT TERM 2826 2681977 - 2681963 - G 93 -8.6 -4.6971 | overlap 2681953 CAAACGCTAATAAAA TACCAG CTG CTGGTA AAATCGCAACAGGTA TERM 2827 2682143 - 2682089 - R 100 -13.4 -5.64274 | gap 3, opp_overlap 2682092 CCATGTACAAAAAAA GCAGGCATGAACAAACAA--G-ACTAT TCTC ATAGTACGGTTGTTTGCTCATGCCTGC ATTACCAGTAACACG TERM 2828 2682309 - 2682265 - R 100 -9.6 -4.55295 | opp_overlap 2682270, overlap 2682270 TTTGTGATAAATAAA CAAAACGGCAATTCCCATTT TGTTG AAATAGAAATTACCGTTTTT ATAGTTCAATTCAAT TERM 2829 2682304 - 2682270 - R 100 -9.5 -5.22481 | opp_overlap 2682270, overlap 2682265 GATAAATAAACAAAA CGGCAATTCCCATTT TGTTG AAATAGAAATTACCG TTTTTATAGTTCAAT SAV2539 2684084 - 2682345 - | pyruvate oxidase SAV2540 2684824 - 2684135 - | hypothetical protein SAV2541 2685212 - 2684817 - | hypothetical protein SAV2542 2686312 - 2685425 - | transcription regulator TERM 2830 2685740 - 2685730 - G 70 -4 -4.93877 | CTTTATTAAATAAAA TGAA GTC TTCA CCTGCTAAATCTTCG TERM 2831 2686238 - 2686258 + g 89 -11.2 -3.3482 | AATATATAATGATTT GGAGGCAT TAGTC ATGCCTCC TTGCTTAACGACTTC SAV2543 2686470 - 2686688 + | hypothetical protein TERM 2832 2686722 - 2686745 + F 100 -13.2 -4.90906 | CACATCATCTCATGT TAGCGCTCTG ATTG CAGGGCGCTA TTTTTAATGTTATCG SAV2544 2687078 - 2687509 + | secretory antigen precursor SsaA TERM 2833 2687512 - 2687568 + T 74 -2 -5.54885 | gap 3 CTATATTTACTAATC AAAAAACTTCTATCACGAACGC-TTCA ATTTCC TGTATGCG-T-GTGATAGAAGTTTTTA TTTTTTGTTCATATT mvaA 2688925 - 2687648 - | hydroxymethylglutaryl-CoA reductase mvaS 2689180 - 2690346 + | 3-hydroxy-3-methylglutaryl CoA synthase TERM 2834 2690379 - 2690432 + T 71 -7 -3.89881 | gap 1, opp_overlap 2690385, overlap 2690385 CATTTAAATATAACC TA-AAAACAGCAGTAAGACAGCTTC TCATT GAAATCGTCTTACTGCTGTTCTCTA TTTATAACACTTCGT TERM 2835 2690425 - 2690385 - T 100 -14.2 -4.8066 | opp_overlap 2690379 2690385 AATATAACCTAAAAA CAGCAGTAAGACAGCTTC TCATT GAAATCGTCTTACTGCTG TTCTCTATTTATAAC TERM 2836 2690385 - 2690425 + T 95 -12 -3.80279 | opp_overlap 2690385, overlap 2690379 AATATAACCTAAAAA CAGCAGTAAGACAGCTTC TCATT GAAATCGTCTTACTGCTG TTCTCTATTTATAAC adaB 2691032 - 2690511 - | methylated DNA-protein cysteine methyltransferase TERM 2837 2693244 - 2693261 + G 79 -8.5 -3.78234 | GAATTCCTTAACCGC TTCAACG GCAT CGTTGAA TTCTTACATTTAGAT clpL 2691441 - 2693546 + | ATP-dependent Clp proteinase chain TERM 2838 2693576 - 2693605 + T 91 -5.1 -5.73672 | gap 1, opp_overlap 2693576 ATCGCGCATCAAAAA TGAGCATCAGGT CGCCCTT GCCTG-TGCTCA TTTTTTTAATTATTT SAV2549 2693785 - 2693615 - | hypothetical protein TERM 2839 2693790 - 2693761 - G 74 -2.3 -5.4477 | AAATTGCTAAAAAAA TTAAAATGTTAAT AATG ACTGACACTTTAA CCACTCCTTAAACAA feoB 2695792 - 2693798 - | ferrous iron transport protein B-like protein SAV2551 2696031 - 2695804 - | hypothetical protein TERM 2840 2696231 - 2696191 - R 100 -19.3 -5.08824 | opp_overlap 2696182 CTTCCATGCAAAAAA CCTCCGCTTCAAATGTC ATTGATA GACATTTAAAGCGGAGG CATGTACATGTTATT SAV2552 2698736 - 2696247 - | antibiotic ABC transporter TERM 2841 2698352 - 2698363 + g 74 -5.8 -4.49132 | CGTCATATGTGATAT CTGC AAAT GCAG TTGTTTTATCTTTAC SAV2553 2698881 - 2699429 + | hypothetical protein TERM 2842 2699511 - 2699473 - T 93 -8.4 -5.20333 | gap 1, opp_overlap 2699473 CATTCATAATAAAAA CGATAGT-GTACACG TTAATGAATT CGTGTACTACTATCG TTTTTTATTTTTATC TERM 2843 2699473 - 2699511 + T 100 -8.4 -5.98675 | gap 1, opp_overlap 2699473 CATTCATAATAAAAA CGATAGT-GTACACG TTAATGAATT CGTGTACTACTATCG TTTTTTATTTTTATC TERM 2844 2699767 - 2699745 - T 89 -6.9 -5.38958 | opp_overlap 2699745 AGTTATAAATAAAAA GAGCCAACC GCAAT GGATGGCCC TTGTTCATTATGAAG rocA 2701329 - 2699785 - | 1-pyrroline-5-carboxylate dehydrogenase SAV2555 2702118 - 2701519 - | putative acetyltransferase SAV2556 2702357 - 2702548 + | hypothetical protein TERM 2845 2702687 - 2702647 - f 100 -12.7 -3.66139 | opp_overlap 2702649, overlap 2702649 TATATAGATGCTAAA TAGAGAGATTGTTGTGCAA TGT TTGCACGGCAATCTCTCTT TTTCTTTTTAAAATT TERM 2846 2702685 - 2702649 - f 100 -15.3 -3.40558 | opp_overlap 2702649, overlap 2702647 TATAGATGCTAAATA GAGAGATTGTTGTGCAA TGT TTGCACGGCAATCTCTC TTTTTCTTTTTAAAA TERM 2847 2702649 - 2702685 + F 100 -19.7 -5.61881 | opp_overlap 2702647 2702649 TATAGATGCTAAATA GAGAGATTGTTGTGCAA TGT TTGCACGGCAATCTCTC TTTTTCTTTTTAAAA TERM 2848 2703089 - 2703077 - g 83 -6.3 -4.88405 | AAGTGTTAAATAAAA TGAAC GGC GTTCA AAATGCAACGGTCAA copA 2702788 - 2705196 + | copper-transporting ATPase TERM 2849 2705624 - 2705636 + F 90 -7.7 -5.1925 | opp_overlap 2705623 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SAV2558 2705734 - 2705940 + | mercuric ion-binding protein TERM 2850 2706027 - 2705981 - T 85 -3.9 -5.73563 | gap 1 ACCAAATTAAAAAAA TCGAACTGATGAGA-ATCCCAA CAAT CCAAATTATCTCATCAGTTCGA TTTTTAATTTACTCG SAV2559 2707029 - 2706031 - | D-lactate dehydrogenase SAV2560 2708206 - 2707052 - | N-succinyldiaminopimelate aminotransferase crtN 2710142 - 2708634 - | squalene synthase TERM 2851 2709726 - 2709752 + g 74 -3 -5.252 | overlap 2709729 GCGATACGTTCTTTC TAAGAAATAGCG ACG TGCAATTTCATA TTTTTTATAAACATC crtM 2711017 - 2710154 - | squalene desaturase SAV2563 2712181 - 2711054 - | hypothetical protein SAV2564 2713680 - 2712187 - | phytoene dehydrogenase SAV2565 2714170 - 2713673 - | hypothetical protein TERM 2852 2714316 - 2714285 - R 100 -10.3 -5.58522 | opp_overlap 2714285 TATATAAAACAAAAA CGCCAATACTCTC ATGTTA GAGAATATTGACG TCATTTGATTTACAT SAV2566 2715103 - 2714336 - | secretory antigen precursor SsaA TERM 2853 2714506 - 2714520 + g 75 -8.6 -3.43848 | opp_overlap 2714505 2714508, overlap 2714503 TTGTTTGCATGATAG CACCAA CTT TTGGTG TATTGTTCACTGTAT SAV2567 2717275 - 2715464 - | acetyltransferase SAV2568 2718276 - 2717788 - | hypothetical protein TERM 2854 2718505 - 2718481 - R 100 -7.9 -5.87996 | opp_overlap 2718480 2718481 TAATTAATAAAAAAA CTCTCCCCA ATTTCTA TGGGAAGAG CTATATATTTAATGT isaA 2719253 - 2718552 - | immunodominant antigen A TERM 2855 2718855 - 2718879 + g 81 -9.3 -3.81428 | overlap 2718856 2718873 2718874 GCTGTAGTTATGGTA AGTTGGAGCTG AAA CAGCTTCAACG TTTGAGTTACTTGAT TERM 2856 2718856 - 2718878 + g 86 -12.8 -2.88134 | overlap 2718855 2718873 2718874 CTGTAGTTATGGTAA GTTGGAGCTG AAA CAGCTTCAAC GTTTGAGTTACTTGA TERM 2857 2719571 - 2719581 + r 72 -4 -5.10461 | CAGCTTTCGTAATAT TACA GAT TGTA TTTTTGTTACATAGC TERM 2858 2719652 - 2719693 + r 72 -6.7 -4.09374 | opp_overlap 2719654, overlap 2719654 TTAAACGCAATTAAA AAGCAATCAACACATATGT TTCT GCACATGTATTGATTGCTA TTATTGTTGTATATT TERM 2859 2719654 - 2719691 + r 81 -9.3 -3.61971 | opp_overlap 2719654, overlap 2719652 AAACGCAATTAAAAA GCAATCAACACATATGT TTCT GCACATGTATTGATTGC TATTATTGTTGTATA TERM 2860 2719691 - 2719654 - R 100 -13 -4.90917 | opp_overlap 2719654 2719652 AAACGCAATTAAAAA GCAATCAACACATATG TTTCTG CACATGTATTGATTGC TATTATTGTTGTATA SAV2570 2720916 - 2719861 - | hypothetical protein SAV2571 2721326 - 2721895 + | hypothetical protein TERM 2861 2722065 - 2722102 + F 90 -6.5 -5.63236 | opp_overlap 2722063 2722066, overlap 2722066 AACTGAATGAAAATA AGCTTGTCATTAAAA CATATAGA TTTTAGTGACAAGCA TTTTTGTTTTTGCGT TERM 2862 2722101 - 2722066 - f 81 -8.5 -4.33004 | opp_overlap 2722065 2722066, overlap 2722063 ACTGAATGAAAATAA GCTTGTCATTAAAAC ATATAG ATTTTAGTGACAAGC ATTTTTGTTTTTGCG TERM 2863 2722066 - 2722101 + F 90 -10 -3.95502 | opp_overlap 2722066 2722063, overlap 2722065 ACTGAATGAAAATAA GCTTGTCATTAAAA CATATAGA TTTTAGTGACAAGC ATTTTTGTTTTTGCG SAV2572 2722273 - 2722593 + | hypothetical protein SAV2573 2722813 - 2723043 + | hypothetical protein SAV2574 2723274 - 2723116 - | hypothetical protein TERM 2864 2723198 - 2723210 + g 88 -7.7 -5.1925 | opp_overlap 2723197 ACTGAATGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SAV2575 2723722 - 2723345 - | hypothetical protein SAV2576 2724560 - 2723739 - | hypothetical protein TERM 2865 2724158 - 2724174 + g 70 -3.8 -5.00027 | CTGTTGCATTTATAT TAGATT CCATT AATCTA TTTTCTATTTTTGCT SAV2577 2724879 - 2724580 - | hypothetical protein TERM 2866 2724960 - 2724973 + H 72 -6.7 -4.06179 | opp_overlap 2724946 2724960, overlap 2724956 2724952 ACGTTTTATAATAAA CGGAT AGTT ATCCG TTTGTCAATTTTAGA TERM 2867 2724973 - 2724960 - H 74 -6.7 -4.30987 | opp_overlap 2724956 2724952 2724960, overlap 2724946 ACGTTTTATAATAAA CGGAT AGTT ATCCG TTTGTCAATTTTAGA SAV2578 2725010 - 2725567 + | hypothetical protein SAV2579 2725560 - 2726264 + | putative short chain oxidoreductase TERM 2868 2726328 - 2726310 - f 74 -3.1 -5.38047 | GAGGTATATAAAAAA TGCTTCT GCAAT AGATGCA ATATACATGCAAAAC SAV2580 2726362 - 2727372 + | hypothetical protein TERM 2869 2727840 - 2727823 - g 71 -3.5 -5.19879 | gap 1 TTGGAAAGATAAAAA TGATG-AC ATT GTGCATCA AATTTTAACAGAAGG TERM 2870 2728154 - 2728128 - g 95 -8.8 -4.84602 | ATATAAACAAAGAAA CTGGCATACCTA TTG TAGATATTCCAG GCGGTCACTTAGGTT SAV2581 2727392 - 2728222 + | hypothetical protein TERM 2871 2728242 - 2728288 + T 89 -6.6 -5.34381 | opp_overlap 2728243 2728245, overlap 2728245 TCGTTCTCTAATAAA ACAGCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGCTTA TTTTTGTTTACGTTT TERM 2872 2728287 - 2728243 - T 73 -5.7 -4.63218 | opp_overlap 2728242 2728245, overlap 2728245 CGTTCTCTAATAAAA CAGCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGCTT ATTTTTGTTTACGTT TERM 2873 2728245 - 2728285 + T 100 -12.7 -4.72696 | opp_overlap 2728243 2728245, overlap 2728242 TTCTCTAATAAAACA GCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGC TTATTTTTGTTTACG TERM 2874 2728285 - 2728245 - T 79 -8.3 -3.93367 | opp_overlap 2728245 2728242, overlap 2728243 TTCTCTAATAAAACA GCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGC TTATTTTTGTTTACG SAV2582 2729259 - 2728369 - | cobalamin synthesis related protein CobW SAV2583 2730696 - 2729356 - | ferrous iron transporter protein B SAV2584 2731796 - 2730690 - | hypothetical protein TERM 2875 2731847 - 2731861 + r 74 -7.2 -3.91144 | opp_overlap 2731847 GTTTTTGACTATAAA TCGTAA TAA TTACGA TTTATAAAGTATAGA TERM 2876 2731861 - 2731847 - R 74 -7.2 -3.96148 | opp_overlap 2731847 GTTTTTGACTATAAA TCGTAA TAA TTACGA TTTATAAAGTATAGA TERM 2877 2731949 - 2731912 - R 74 -2.1 -5.52079 | gap 1, opp_overlap 2731922 ATATTAAAAGAAAAA CTTCCGTTATTGTAGA GAATTCA TCTACATTT-CGGAAG TTGGTATGTGTCTTT SAV2585 2732425 - 2732129 - | hypothetical protein SAV2586 2732781 - 2732413 - | hypothetical protein SAV2587 2733071 - 2732796 - | hypothetical protein TERM 2878 2733198 - 2733184 - R 70 -5.8 -4.24948 | opp_overlap 2733183 2733179 TGATTATATTCAAAA TTATTG TAT CAATAA ATATGTATCATTCCT SAV2588 2734281 - 2733415 - | hypothetical protein SAV2589 2734499 - 2735563 + | dihydroorotate dehydrogenase 2 TERM 2879 2735760 - 2735746 - g 91 -4.2 -5.9218 | CAGATAATAAAAAAA CAGTAG CGA CTTCTG ACAACAAAGACACAC SAV2590 2735718 - 2735993 + | hypothetical protein TERM 2880 2736109 - 2736070 - T 100 -11.7 -4.16814 | opp_overlap 2736070 CGATTATATAAATAA CCCGAGATTTTAGTA TGATTCATTT CACTAAAATCTCGGG TTTCTATTTGATAAT TERM 2881 2736070 - 2736109 + T 100 -11.6 -4.37506 | opp_overlap 2736070 CGATTATATAAATAA CCCGAGATTTTAGTATGA TTCA TTTCACTAAAATCTCGGG TTTCTATTTGATAAT SAV2591 2736901 - 2736179 - | hypothetical protein TERM 2882 2737178 - 2737200 + H 75 -4.2 -5.21709 | opp_overlap 2737178, overlap 2737180 ATTGACTTCAATTCA TCGTAAAAGT TAT ACTTTTGCCA TTTTTTAATGTAACA SAV2592 2737255 - 2737704 + | hypothetical protein TERM 2883 2737748 - 2737782 + T 77 -5.8 -4.91357 | opp_overlap 2737751, overlap 2737751 GCTTATGTTATTTAG CAAGGCAAGCCA CTCTCGATTCA TGGCTTGCCTTA TTTTATTGTATATTT TERM 2884 2737751 - 2737779 + T 79 -7.5 -4.51787 | opp_overlap 2737751, overlap 2737748 TATGTTATTTAGCAA GGCAAGCCA CTCTCGATTCA TGGCTTGCC TTATTTTATTGTATA TERM 2885 2737779 - 2737751 - T 70 -8.2 -3.18582 | opp_overlap 2737748 2737751 TATGTTATTTAGCAA GGCAAGCCAC TCTCGATTC ATGGCTTGCC TTATTTTATTGTATA SAV2593 2738372 - 2737785 - | hypothetical protein SAV2594 2738515 - 2740197 + | hypothetical protein TERM 2886 2740251 - 2740288 + T 90 -7.8 -5.31855 | gap 1, opp_overlap 2740252, overlap 2740252 TAGTGATAGAAGAGA AGGCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGCCC TTTTTATTATTGATG TERM 2887 2740287 - 2740252 - T 95 -11.3 -3.80276 | gap 1, opp_overlap 2740251 2740252 AGTGATAGAAGAGAA GGCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGCC CTTTTTATTATTGAT TERM 2888 2740252 - 2740287 + T 95 -11.3 -3.77486 | gap 1, opp_overlap 2740252, overlap 2740251 AGTGATAGAAGAGAA GGCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGCC CTTTTTATTATTGAT SAV2595 2740930 - 2740295 - | hypothetical protein SAV2596 2742022 - 2740946 - | hypothetical protein TERM 2889 2742352 - 2742305 - R 100 -10.9 -4.8543 | opp_overlap 2742311, overlap 2742311 CAATTGGCATAAAAA TAAAAACCCCTAATGGATAAC TACATT GTTATCTACTAGAGGTTTCTA ACTTATACTATTTTA TERM 2890 2742346 - 2742311 - R 100 -7.7 -5.69262 | opp_overlap 2742311, overlap 2742305 GCATAAAAATAAAAA CCCCTAATGGATAAC TACATT GTTATCTACTAGAGG TTTCTAACTTATACT panD 2742736 - 2742365 - | aspartate alpha-decarboxylase panC 2743601 - 2742750 - | pantoate--beta-alanine ligase panB 2744412 - 2743594 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase SAV2600 2744485 - 2745345 + | 2-dehydropantoate 2-reductase TERM 2891 2745414 - 2745366 - T 77 -4.9 -5.1764 | gap 2 TATATAATATAAAAA GACCTTAACGATGCATTTAGAAC CACCT GTTCCTAAT--ATCGCTAAGGTC TTTTAATTATATTAG SAV2601 2746135 - 2745431 - | alpha-acetolactate decarboxylase TERM 2892 2746372 - 2746329 - R 95 -8.3 -5.40072 | opp_overlap 2746330, overlap 2746330 TGCTTGCTAAAAAAA TGGATCTATCAGTGCCACA TGTTAC TGCAACACTAATAGATCCT CTTACCATTAATATA TERM 2893 2746371 - 2746330 - R 95 -11.8 -3.83561 | opp_overlap 2746330, overlap 2746329 GCTTGCTAAAAAAAT GGATCTATCAGTGCCACA TGTTAC TGCAACACTAATAGATCC TCTTACCATTAATAT SAV2602 2747372 - 2746413 - | L-lactate dehydrogenase SAV2603 2748058 - 2749506 + | amino acid transporter TERM 2894 2749520 - 2749557 + T 100 -8.8 -5.8901 | gap 2, opp_overlap 2749520 AAAAAATCAAAAAAA TCATTTCC-CATCTG-AT TAAC ATCCAGATGTGGAAATGA TTTTTTATTTTATAT TERM 2895 2749557 - 2749520 - T 100 -10.1 -5.88061 | gap 1, opp_overlap 2749520 AAAAAATCAAAAAAA TCATTTCC-CATCTGATT AAC ATCCAGATGTGGAAATGA TTTTTTATTTTATAT SAV2604 2750960 - 2749587 - | 4-aminobutyrate aminotransferase SAV2605 2751182 - 2751598 + | hypothetical protein TERM 2896 2751660 - 2751674 + F 85 -7.2 -4.93296 | TCAAGGTTTATGACT TGAGAA ATG TTCTCA TTTTTATCATACTGG SAV2606 2751721 - 2752611 + | fructose-1,6-bisphosphate aldolase TERM 2897 2752654 - 2752691 + T 90 -7.9 -5.27477 | gap 1, opp_overlap 2752654 TAAACTACTAAAAAG GACTCATACAT-GTGCTT TAA GGGCATTGTGTATGAGTC TTTTTTGATTAAAGT TERM 2898 2752742 - 2752782 + T 100 -19.3 -4.24204 | opp_overlap 2752742 GATTACGTAAAAAAA TCGGACAGCTGAAAAATCT TTA AGATTTCTCAGTTGTCCGA TTTTAAATATAGCTA TERM 2899 2752782 - 2752742 - T 100 -19.3 -5.48825 | opp_overlap 2752742 GATTACGTAAAAAAA TCGGACAGCTGAAAAATCT TTA AGATTTCTCAGTTGTCCGA TTTTAAATATAGCTA mqo2 2754301 - 2752805 - | malate:quinone oxidoreductase TERM 2900 2752898 - 2752908 + g 70 -4 -4.89562 | opp_overlap 2752886 TAATGATTCACCGTA TGAT GGA ATCA TTTTCTTGATTTTAG TERM 2901 2753080 - 2753113 + g 73 -8.3 -3.54129 | gap 1 GGATGAATCCTTTAC CGTGTTCAGGTGTATC TTT GATA-ACTTGTACACG TTTACCAGCAGTGTA TERM 2902 2753527 - 2753538 + g 84 -5.8 -5.32882 | CCAAATGTTTACTTT CAGG GATA CCTG TTTTTTGTAATAATG SAV2608 2754678 - 2754926 + | hypothetical protein TERM 2903 2754978 - 2754932 - T 100 -10.2 -4.61852 | opp_overlap 2754926 2754935, overlap 2754935 AACATCATAAATAAA CAAGCAGTCCAGTGCGTATCAT CAT ACCTTACGCATTGGACTGCTTT GCTATGTTTATTGAT TERM 2904 2754975 - 2754935 - T 100 -11.9 -4.39652 | opp_overlap 2754926 2754935, overlap 2754932 ATCATAAATAAACAA GCAGTCCAGTGCGTATCAT CAT ACCTTACGCATTGGACTGC TTTGCTATGTTTATT TERM 2905 2754935 - 2754975 + T 100 -13.5 -3.99819 | opp_overlap 2754935 2754932, overlap 2754926 ATCATAAATAAACAA GCAGTCCAGTGCGTA TCATCATACCT TACGCATTGGACTGC TTTGCTATGTTTATT SAV2609 2756605 - 2754986 - | acetate-CoA ligase SAV2610 2757221 - 2756778 - | hypothetical protein TERM 2906 2757470 - 2757441 - R 74 -7.9 -3.745 | overlap 2757439 TTAGTCATGAAAATA GCCGACAACTTCA TCTG TGAAATCACCGGC CTTTTATTTTAGCTA SAV2611 2757713 - 2757501 - | hypothetical protein TERM 2907 2757970 - 2757942 - R 100 -12.5 -5.28315 | opp_overlap 2757968 ATAAAACGCAAAAAA GTCTGGCACCAAT ACA ATAGATGCCAGAC TAAGAGTCTACTATA betA 2759700 - 2757991 - | choline dehydrogenase TERM 2908 2759274 - 2759294 + g 79 -3.9 -5.47914 | opp_overlap 2759279 GGCCTCTAAATTTAT CATAAGGCG CTG CACCGTATG TTTTTTCTAATTTTT TERM 2909 2759948 - 2759916 - R 75 -5.7 -4.83243 | gap 1, opp_overlap 2759915 2759916 CTTATACAAAACAAA GTGAGTGTC-TTGT GTTCTT ACAATGGCACTCAC CTTATCTAATTTTTA TERM 2910 2759916 - 2759948 + r 71 -8.6 -2.82138 | gap 1, opp_overlap 2759916, overlap 2759915 CTTATACAAAACAAA GTGAGTGTC-TTGTG TTCT TACAATGGCACTCAC CTTATCTAATTTTTA gbsA 2761451 - 2759961 - | glycine betaine aldehyde dehydrogenase TERM 2911 2761470 - 2761493 + H 70 -6.2 -4.12198 | ACAACCTCCGTTAAG TTTGTTAAAT TTTT ATTTAACGAA TTTTACAAACTTATG TERM 2912 2762037 - 2762025 - g 77 -4.9 -5.14563 | TTTTTCACTAAAAAA TTTCA GCG TGAAA TTGACATCAATGTCG SAV2614 2761701 - 2762267 + | hypothetical protein TERM 2913 2762337 - 2762370 + T 100 -12.7 -5.58522 | opp_overlap 2762337 GGTCCACGAAATAAA CGGTAATTTCTATCT CAAT AAATAGAAATTACCG TTTTTGTTTTATATG TERM 2914 2762370 - 2762337 - T 100 -14.9 -4.49556 | opp_overlap 2762337 GGTCCACGAAATAAA CGGTAATTTCTATCT CAAT AAATAGAAATTACCG TTTTTGTTTTATATG cudT 2764060 - 2762438 - | choline transporter TERM 2915 2762574 - 2762564 - G 70 -4 -4.86773 | TAAAATGATTAAAAA TGAT ATC ATCA TGAAAATAAAAATAA TERM 2916 2764321 - 2764339 + r 71 -4.6 -4.73677 | GCATTTAAGAATATT TATACGTT TTT AACGAATA TTTATTTATTGTAAA TERM 2917 2764568 - 2764537 - R 100 -14.6 -4.75174 | opp_overlap 2764540 TACCTAACCTAAAAA GAAGCCAAGGCAAC GAAT GTTACCTTGACTTC TAATACATATTCAAC SAV2616 2765115 - 2764579 - | anaerobic (class III) ribonucleotide reductase small subunit chain nrdD 2766962 - 2765112 - | anaerobic ribonucleoside triphosphate reductase TERM 2918 2766621 - 2766646 + g 81 -9.1 -3.71672 | opp_overlap 2766627, overlap 2766627 ATTGGCTATAATTTG TACAAGCTGCG CTGA TGCAGTTTGTA TTGATTTTGGTGAAG SAV2618 2768522 - 2767152 - | magnesium citrate secondary transporter TERM 2919 2768426 - 2768410 - G 79 -9.5 -3.33815 | ATTGCCCCTAAGCAA GGTATGA TTG TCATACC TACAACTGGATTTAT TERM 2920 2768809 - 2768769 - R 86 -7.1 -5.26316 | gap 1 CTATTGCACAAAAAA TCTGGCTAAAGGTCGCTA TGATAG TAACGAC-TTCAACCAGA TTTCAATTTATCCAT SAV2619 2769620 - 2769015 - | precorrin-2 dehydrogenase SAV2620 2771563 - 2769683 - | sulfite reductase flavoprotein TERM 2921 2771919 - 2771879 - R 100 -13.5 -4.78848 | opp_overlap 2771878 2771880 2771911, overlap 2771880 TTTCTAAATATAAAA TGCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGCT CTTGTGTTATTTGCA TERM 2922 2771880 - 2771918 + r 83 -10.4 -3.53115 | opp_overlap 2771879 2771880, overlap 2771878 2771911 TTCTAAATATAAAAT GCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGC TCTTGTGTTATTTGC TERM 2923 2771918 - 2771880 - R 100 -17 -3.46586 | opp_overlap 2771880 2771878 2771911, overlap 2771879 TTCTAAATATAAAAT GCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGC TCTTGTGTTATTTGC SAV2621 2772454 - 2771957 - | putative glutathione peroxidase TERM 2924 2773776 - 2773752 - R 100 -10.1 -4.8048 | TTGTTATATTAAAAA CCGACAAGACA TTT TATCTTATCGG TTCAAATTTGGTATT SAV2622 2775878 - 2773878 - | ABC transporter ATP-binding protein SAV2623 2776630 - 2775875 - | ABC transporter ATP-binding protein TERM 2925 2776716 - 2776677 - R 88 -3.2 -6.11229 | overlap 2776695 ATTAAAACAAAAAAA TACTAATAACATTT AAATTAGTAAAA AAATGTTACTAGTA TACTTACAATATTGA SAV2624 2777625 - 2776738 - | putative two-component sensor histidine kinase SAV2625 2778301 - 2777636 - | two-component response regulator SAV2626 2778527 - 2778327 - | hypothetical protein phoB 2778725 - 2780149 + | alkaline phosphatase III precursor TERM 2926 2780162 - 2780192 + T 100 -11.2 -5.42265 | opp_overlap 2780162 TAAAGCATAAAAAAA TTCCCGAGCACTAT AAC AAGGTGTTCGGGAA TTTTTTATGGTTTAA TERM 2927 2780192 - 2780162 - T 95 -6.9 -5.75599 | opp_overlap 2780162 TAAAGCATAAAAAAA TTCCCGAGCAC TATAACAAG GTGTTCGGGAA TTTTTTATGGTTTAA SAV2628 2780905 - 2780432 - | transcriptional regulator SAV2629 2781893 - 2781132 - | tributyrin esterase TERM 2928 2781995 - 2781976 - R 100 -10.8 -5.7946 | TTTTCAACAAAAAAA CCGAATAC AAAT GTATTCGG CCTAAAAAAGTATTT clfB 2784642 - 2782009 - | clumping factor B TERM 2929 2784959 - 2784932 - R 100 -10.7 -5.15634 | opp_overlap 2784932 2784929 CATGCTAGCAAAAAA GGCCTAACGTA TAAATG TACGTTAGACC TCATGTTCAACTTAT TERM 2930 2784932 - 2784959 + r 74 -9.2 -2.76313 | opp_overlap 2784932, overlap 2784929 CATGCTAGCAAAAAA GGCCTAACGTAT AAAT GTACGTTAGACC TCATGTTCAACTTAT SAV2631 2785696 - 2784992 - | transcriptional regulator arcC 2786736 - 2785795 - | carbamate kinase arcD 2788183 - 2786753 - | arginine/oirnithine antiporter arcB 2789284 - 2788274 - | ornithine carbamoyltransferase arcA 2790552 - 2789317 - | arginine deiminase TERM 2931 2790859 - 2790818 - R 100 -13.3 -5.60993 | CTTTCCATAAAAAAA CGCGTACACAAGTTAAT ATTTGGTA ACTAACTTGTGTACACG TGATACGAAACTAAT SAV2636 2791348 - 2790899 - | arginine repressor TERM 2932 2791643 - 2791604 - R 79 -9.4 -3.38415 | opp_overlap 2791602, overlap 2791602 2791600 CTAATTACAAAGAGA GGGTATACCTACAAAG TCAATTAT CAATGTAGGTATACCC CATATATAAGCTGTA aur 2793244 - 2791715 - | zinc metalloproteinase aureolysin TERM 2933 2793651 - 2793617 - R 72 -2.9 -5.4833 | gap 1 TTATTTAATAAAAAA GACTAGAATGCG-GTA TCTC TCCTCACACTCTAGCC TTAATATGCCATTAT isaB 2794195 - 2793668 - | immunodominant antigen B SAV2639 2794453 - 2794911 + | hypothetical protein TERM 2934 2794958 - 2795004 + F 100 -11.2 -4.47786 | opp_overlap 2794961, overlap 2794961 TGCATAAATTCAGAA AAACAGCAGTGAGATATTTT TCTATTT GAAATATCTTACTGCTGTTC TTTATTTGCATAATT TERM 2935 2795001 - 2794961 - f 100 -10 -4.95896 | opp_overlap 2794958 2794961 ATAAATTCAGAAAAA CAGCAGTGAGATATTT TTCTATTTG AAATATCTTACTGCTG TTCTTTATTTGCATA TERM 2936 2794961 - 2795001 + F 100 -12.9 -4.34285 | opp_overlap 2794961, overlap 2794958 ATAAATTCAGAAAAA CAGCAGTGAGATATTTT TCTATTT GAAATATCTTACTGCTG TTCTTTATTTGCATA SAV2640 2795151 - 2797025 + | BglG family transcription antiterminator TERM 2937 2797020 - 2797050 + F 85 -4.9 -5.58454 | opp_overlap 2797020 2797023 TTTGAATACTTACAA GAATAATTGCC ACTAGTAAC GGTAATTATTC TTTTTTTAGTATCGA TERM 2938 2798349 - 2798306 - g 77 -9 -3.59738 | gap 1, opp_overlap 2798308 2798311 2798312, overlap 2798309 CATTATACCTGCAAA CATCATTGG-TGCAATGATTG CAT CAGTCATTGCAGCCATTGGTG GTGTCGGCGATAGAG TERM 2939 2798346 - 2798309 - g 72 -9.3 -2.62171 | gap 1, opp_overlap 2798308 2798311 2798312, overlap 2798306 TATACCTGCAAACAT CATTGG-TGCAATGATTG CAT CAGTCATTGCAGCCATTG GTGGTGTCGGCGATA TERM 2940 2798312 - 2798343 + G 89 -11.8 -3.24747 | gap 1, opp_overlap 2798309 2798306, overlap 2798308 2798311 ACCTGCAAACATCAT TGG-TGCAATGATTG CAT CAGTCATTGCAGCCA TTGGTGGTGTCGGCG SAV2641 2797101 - 2799053 + | fructose phosphotransferase system enzyme fruA-like protein TERM 2941 2799285 - 2799258 - g 73 -8.6 -3.21395 | opp_overlap 2799250 2799256 2799253, overlap 2799256 ACTTTGGTCACAACA TCGTGAATTATT CGAT AATGATTCACGA GATAGTTTCCCTCTG pmi 2799067 - 2800005 + | mannose-6-phosphate isomerase TERM 2942 2800068 - 2800113 + T 82 -6.3 -5.24796 | opp_overlap 2800073, overlap 2800073 TCTGTCTAAAAACAT AAAAATCCACACATTAAGG AGCTATAA CCCTAATGTGTGGATTTAA TTTTTATTCTGTAAC TERM 2943 2800108 - 2800073 - T 100 -12.8 -5.36364 | opp_overlap 2800073 2800068 CTAAAAACATAAAAA TCCACACATTAAGG AGCTATAA CCCTAATGTGTGGA TTTAATTTTTATTCT TERM 2944 2800073 - 2800108 + T 100 -10.6 -4.44392 | opp_overlap 2800073, overlap 2800068 CTAAAAACATAAAAA TCCACACATTAAGG AGCTATAA CCCTAATGTGTGGA TTTAATTTTTATTCT SAV2643 2803098 - 2800117 - | phage infection protein SAV2644 2803309 - 2805168 + | N-acetylmuramoyl-L-alanine amidase TERM 2945 2805260 - 2805292 + T 72 -8.4 -3.33092 | opp_overlap 2805262, overlap 2805259 2805262 TTTCTTATTCAATTA AACCCGAGGTATTC AGTTC GAACGCCTCGGGTC ATTTTATATAAATAT TERM 2946 2805262 - 2805290 + T 87 -11 -3.22496 | opp_overlap 2805262, overlap 2805260 2805259 TCTTATTCAATTAAA CCCGAGGTATTC AGTTC GAACGCCTCGGG TCATTTTATATAAAT TERM 2947 2805290 - 2805262 - T 100 -11.7 -3.93288 | opp_overlap 2805262 2805260 2805259 TCTTATTCAATTAAA CCCGAGGTATTCA GTT CGAACGCCTCGGG TCATTTTATATAAAT SAV2645 2805993 - 2805433 - | hypothetical protein SAV2646 2808069 - 2806162 - | hypothetical protein SAV2647 2809668 - 2808310 - | hypothetical protein SAV2648 2811169 - 2809661 - | lipopolysaccharide biosynthesis protein SAV2649 2813577 - 2811187 - | preprotein translocase subunit SecA TERM 2948 2811452 - 2811466 + g 72 -5 -4.66833 | opp_overlap 2811441 2811452 2811454, overlap 2811454 AAAATATTATAATAA TATGCA CTT TGCATG TTTTTACGATTCAAA TERM 2949 2813254 - 2813243 - G 72 -5.8 -4.35044 | opp_overlap 2813243 2813242 2813239, overlap 2813228 GCATTTAAATATAAA GGCA TCGT TGCC GTTAATGTTTTACCT SAV2650 2814607 - 2813567 - | hypothetical protein SAV2651 2816072 - 2814504 - | hypothetical protein SAV2652 2817615 - 2816062 - | hypothetical protein secY 2818837 - 2817626 - | preprotein translocase subunit SecY TERM 2950 2818024 - 2818041 + g 76 -6.3 -4.64676 | overlap 2818013 2818006 CAAATGTCAGCATTG GCATGTC ATCT GATATGC TTTTATTAAACATAG TERM 2951 2818253 - 2818241 - G 74 -6.3 -4.27463 | overlap 2818232 TAATAAGATAAACAA TGTGA TTA TCACA AGGATGATTAACAAC SAV2654 2825782 - 2818967 - | serine-threoinine rich antigen TERM 2952 2819223 - 2819241 + g 80 -10.4 -3.1247 | overlap 2819238 GATGTGCTCGTGCTG TGAGTATG ATG CATACTCA TTGAGTCTGACGGAT TERM 2953 2824868 - 2824857 - G 70 -4.4 -4.82678 | CCAGAAAAATGAAAA CTCT TATT AGAG TCAATACGTGTTCCT TERM 2954 2826298 - 2826262 - R 93 -8.2 -5.24449 | opp_overlap 2826262 TATAAAGCGAAAAAA TGCATCGCTACTAAGT TGAAT ATTTAGTAACAATGCA TTGAATTCACTAAAA SAV2655 2827018 - 2826326 - | hypothetical protein SAV2656 2827338 - 2827712 + | hypothetical protein SAV2657 2827696 - 2828001 + | hypothetical protein SAV2658 2828155 - 2828514 + | hypothetical protein SAV2659 2829210 - 2828599 - | hypothetical protein SAV2660 2829765 - 2829289 - | methionine sulfoxide reductase A SAV2661 2830268 - 2829768 - | putative acetyltransferase TERM 2955 2830480 - 2830459 - R 100 -9.5 -4.72333 | opp_overlap 2830459 2830461, overlap 2830437 AAGCATACTCAAAAA GACTGGTAC ATGT ATACCAGTC TAATTCGAAAAAATA TERM 2956 2830459 - 2830480 + r 70 -8.8 -2.71144 | opp_overlap 2830437 2830459, overlap 2830461 AAGCATACTCAAAAA GACTGGTA CATGTA TACCAGTC TAATTCGAAAAAATA SAV2662 2831270 - 2830503 - | capsular polysaccharide biosynthesis SAV2663 2831959 - 2831267 - | capsular polysaccharide biosynthesis SAV2664 2832638 - 2831976 - | capsular polysaccharide biosynthesis TERM 2957 2833059 - 2833033 - R 100 -10.2 -4.3953 | opp_overlap 2833032 2833031 2833034, overlap 2833034 GTTAATGATAATAAA GCCCACACCTTT TAA AAAGATGTGGGT AATTTATATAATTTT TERM 2958 2833058 - 2833034 - R 100 -13.7 -3.22995 | opp_overlap 2833032 2833031 2833034, overlap 2833033 TTAATGATAATAAAG CCCACACCTTT TAA AAAGATGTGGG TAATTTATATAATTT TERM 2959 2833034 - 2833058 + r 91 -11.5 -3.0955 | opp_overlap 2833034 2833033, overlap 2833032 2833031 TTAATGATAATAAAG CCCACACCTTT TAA AAAGATGTGGG TAATTTATATAATTT TERM 2960 2833103 - 2833136 + r 100 -14 -3.38118 | opp_overlap 2833103 AACTTATAAAAAAAA GCGCCTATGTCATG ATTTAC CATCACATAGGCGC TTATCAATAAATTAT TERM 2961 2833136 - 2833103 - R 100 -14.7 -5.97575 | opp_overlap 2833103 AACTTATAAAAAAAA GCGCCTATGTCATGA TTTA CCATCACATAGGCGC TTATCAATAAATTAT icaR 2834047 - 2833487 - | ica operon transcriptional regulator TERM 2962 2834525 - 2834505 - gH 70 -5.6 -4.27483 | opp_overlap 2834500, overlap 2834500 ATCTATAAAATCAAA GAAAATAA TGACT TTATTTTC GTCGATTTACAAGAA TERM 2963 2834894 - 2834914 + GH 81 -9.1 -3.67792 | opp_overlap 2834893 GATTACCGAAGATAT TGCAGTTTC TTG GAAATTGCA TTTACGTGGATATCG icaA 2834211 - 2835449 + | N-glycosyltransferase PgaC icaD 2835413 - 2835718 + | intercellular adhesion protein D icaB 2835715 - 2836587 + | intercellular adhesion protein B TERM 2964 2836697 - 2836724 + G 72 -5 -4.73388 | GGAGGATCCTTAGTA TTACAATTTTAC ATTC GTAATATTGTGA TTTTTGGTACACCTT icaC 2836574 - 2837626 + | intercellular adhesion protein C TERM 2965 2837647 - 2837697 + F 89 -10.6 -3.8572 | gap 1, opp_overlap 2837638 2837647, overlap 2837658 AAGCTATGTTAAAAA CACGCGGT-GGGCGAAATCAGTT TGAATT GACTGACTTCGTTTTACCGCGTG TTTAATAATGTTATA TERM 2966 2837697 - 2837647 - f 73 -5.5 -4.63184 | gap 1, opp_overlap 2837647 2837658, overlap 2837638 AAGCTATGTTAAAAA CACGCGGT-GGGCGAAATCAGT TTGAATTG ACTGACTTCGTTTTACCGCGTG TTTAATAATGTTATA TERM 2967 2837824 - 2837842 + G 83 -6.1 -5.06414 | CTTGCATTGTTTGTA GAATTTC TTTTC GAAATTC TTTTTGTTGGGGCCC SAV2670 2837769 - 2837879 + | hypothetical protein lip 2840006 - 2837961 - | triacylglycerol lipase precursor TERM 2968 2838086 - 2838101 + g 72 -6.2 -4.38712 | opp_overlap 2838086 GTCCTACAAAGTCAA CATGAT CCCA ATCATG TTTTGTAGGCGTCAC TERM 2969 2840179 - 2840158 - R 75 -4.5 -5.08824 | opp_overlap 2840147 2840145 2840162, overlap 2840162 TTTGTATTTAAAAAA TATATTCTC CAAA GAGAATTTA AAGTGTATACGCTAA TERM 2970 2840650 - 2840607 - R 70 -4.1 -4.93296 | gap 1, opp_overlap 2840620, overlap 2840609 TGATTAGCATAAAAA TACACCCCATAAAGTTAG TTTTTTAGT CTAACTTT-CGGGATGCA CATCTTAGTTCTAAT TERM 2971 2840741 - 2840717 - R 79 -10.3 -3.00022 | overlap 2840736 TTCAGGCTAGATATA TTTGTATTTAT AGT ATAAATACAAA GAATGTAAAGACAAC hisI 2841728 - 2841096 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein hisF 2842483 - 2841725 - | cyclase-like protein hisF SAV2674 2843184 - 2842480 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisH 2843755 - 2843177 - | imidazole glycerol phosphate synthase subunit HisH hisB 2844330 - 2843752 - | imidazoleglycerol-phosphate dehydratase SAV2677 2845312 - 2844299 - | hypothetical protein SAV2678 2846578 - 2845328 - | histidinol dehydrogenase hisG 2847185 - 2846571 - | ATP phosphoribosyltransferase catalytic subunit hisZ 2848021 - 2847203 - | ATP phosphoribosyltransferase regulatory subunit SAV2681 2849449 - 2848325 - | hypothetical protein SAV2682 2850064 - 2849567 - | hypothetical protein SAV2683 2850944 - 2850111 - | cobalt ABC transporter SAV2684 2852548 - 2850941 - | ABC transporter ATP-binding protein SAV2685 2853260 - 2852706 - | hypothetical protein SAV2686 2854137 - 2853289 - | hypothetical protein TERM 2972 2853961 - 2853945 - G 73 -4.4 -4.99035 | gap 1, opp_overlap 2853945 CCACTGATACAAAAA CTGTGCC TTTA GGC-CAG TATTTTACAGTTTGA TERM 2973 2854496 - 2854480 - H 71 -2.3 -5.38249 | overlap 2854482 ATCAAGTATAAAAAA TATATCT AAG AGATAAA AATATGGAGGTTTTA TERM 2974 2854787 - 2854777 - g 77 -5.4 -4.87133 | ACGTTTGAAACAAAA TCAG TTA CTGA AAACAAAGTTGTTGG SAV2687 2854516 - 2855031 + | hypothetical protein TERM 2975 2855075 - 2855107 + T 100 -11.5 -5.00138 | opp_overlap 2855075 TATATATATACGAAA TGCCAACTATATC ATCCCTA GGTATAGTTGGCA TTTTTCGTTTAACTC TERM 2976 2855107 - 2855075 - T 86 -9.3 -3.92267 | opp_overlap 2855075 TATATATATACGAAA TGCCAACTATATC ATCCCTA GGTATAGTTGGCA TTTTTCGTTTAACTC drp35 2856156 - 2855182 - | Drp35 TERM 2977 2856332 - 2856343 + H 73 -5.8 -4.66535 | opp_overlap 2856331 2856332 GACGTAGATAAATAT GCGT ATTG ACGC TTTATTTTAAAAATT TERM 2978 2856399 - 2856412 + G 74 -5.3 -4.74285 | AGGAGATTAACCTAT GAACT ATCA AGTTC TTTTATATTATAAAT SAV2689 2856397 - 2857353 + | hypothetical protein pcp 2857505 - 2858143 + | pyrrolidone-carboxylate peptidase TERM 2979 2858207 - 2858159 - T 77 -7.8 -4.04319 | gap 2, opp_overlap 2858155 2858169 2858176 TTATAAATGCACAAA CAAAAGCACCCTAATTTGTTAG TTTAAGT CTAACT--TTAGGGTGCTTTTG GATGATTGGTATACA SAV2691 2859029 - 2858262 - | hypothetical protein TERM 2980 2858612 - 2858623 + g 71 -3 -5.14563 | CATAAGTCACATTTA TAAC ATAC GTTA TTTTTTGGTCACCAA SAV2692 2859357 - 2859019 - | hypothetical protein TERM 2981 2859888 - 2859872 - g 81 -9.5 -3.78409 | opp_overlap 2859872 2859875, overlap 2859875 GCAATTGAATTGAAA CAACCAA TTG TTGGTTG TAATAACTTAGAAGA SAV2693 2859524 - 2859988 + | hypothetical protein TERM 2982 2860003 - 2860025 + F 95 -6.3 -5.85425 | opp_overlap 2859993 2860004, overlap 2860004 2860024 AATATGTGCTTATTA ACCGTTAAC AACAC GTTAACGGG TTTTTTATTTGTTTA TERM 2983 2860004 - 2860024 + F 91 -9.8 -4.07595 | opp_overlap 2859993 2860004, overlap 2860003 ATATGTGCTTATTAA CCGTTAAC AACAC GTTAACGG GTTTTTTATTTGTTT TERM 2984 2860024 - 2860004 - f 81 -10.5 -3.14683 | opp_overlap 2860004 2860003, overlap 2859993 ATATGTGCTTATTAA CCGTTAACA ACA CGTTAACGG GTTTTTTATTTGTTT SAV2694 2860226 - 2861044 + | 2-oxoglutarate/malate translocator SAV2695 2861041 - 2861643 + | 2-oxoglutarate/malate translocator TERM 2985 2861657 - 2861683 + T 86 -7.3 -5.08367 | AAAATATTTAAATTA GTGCTCGAATC TCATT GATTTGGGCGC TTTTTAATTTGTATT TERM 2986 2861932 - 2861889 - T 85 -2.7 -5.99154 | gap 1 CATGAAATAAAAAAA CACCTTCGTTTAAATTCA TTTTAAGTG CGAATTCA-ACGAAAGTG ATTTATTTCATATTC SAV2696 2862965 - 2862057 - | rarD protein SAV2697 2863187 - 2863762 + | hypothetical protein SAV2698 2863924 - 2864940 + | high-affinity nickel-transport protein TERM 2987 2865442 - 2865432 - g 79 -5.4 -5.20333 | opp_overlap 2865432, overlap 2865436 TATTTACAACAAAAA GGAT TTA ATCC TGAATTAATGTCAGC SAV2699 2865177 - 2865977 + | N-hydroxyarylamine O-acetyltransferase TERM 2988 2866094 - 2866049 - T 71 -7.9 -3.5241 | gap 1, opp_overlap 2866093, overlap 2866058 TATGCTTCATAAACA CAACAAAAAGGATATGACACAA ACT TCATGTCACACCCTTCTT-TTG AACCGCTTCATTTTA TERM 2989 2866086 - 2866058 - T 86 -7.5 -5.33331 | overlap 2866049 TAAACACAACAAAAA GGATATGACACAA ACT TCATGTCACACCC TTCTTTTGAACCGCT SAV2700 2866623 - 2866111 - | hypothetical protein vraD 2866906 - 2867664 + | ABC transporter ATP-binding protein VraD vraE 2867654 - 2869534 + | vraE protein SAV2703 2869626 - 2869817 + | hypothetical protein TERM 2990 2869876 - 2869898 + F 81 -5.6 -5.31456 | opp_overlap 2869876 AGATTTTAATATCAA CAAGTAGC ATTTATC GCTGCTTG TTTTTTATGAATTGC cspB 2870209 - 2870409 + | cold shock protein TERM 2991 2870445 - 2870425 - T 100 -9.1 -5.18371 | opp_overlap 2870425 2870424 TCTTACAAAATAAAA CGACTCATT ATA AATGAATCG CTTTGATTACCAACA TERM 2992 2870453 - 2870481 + T 100 -14.1 -5.70829 | opp_overlap 2870459 ATGAATCGCTTTGAT TACCAACAAGGTT CTA AATCTTGTTGGTA TTTTTTTATGCTATT SAV2705 2871096 - 2870527 - | hypothetical protein TERM 2993 2870692 - 2870706 + g 76 -2.8 -5.52909 | AATTCGATCGTAGTT GTCCAT TTT ATGCAC TTTTTTTAAATCTTC SAV2706 2871751 - 2871356 - | hypothetical protein SAV2707 2872172 - 2871819 - | hypothetical protein TERM 2994 2872436 - 2872424 - g 88 -7.7 -5.1925 | opp_overlap 2872423 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SAV2708 2872360 - 2872509 + | hypothetical protein TERM 2995 2872584 - 2872556 - T 93 -4.7 -6.09196 | opp_overlap 2872551 2872556 CGTAAAACAAAAAAA GACAAAGCT GTTATGATCTT AGCTTTGTC TTTTATGTGTTAGTC TERM 2996 2872556 - 2872584 + T 72 -5.4 -4.6955 | opp_overlap 2872556, overlap 2872551 CGTAAAACAAAAAAA GACAAAGCTG TTATGATCT TAGCTTTGTC TTTTATGTGTTAGTC SAV2709 2873462 - 2872623 - | DNA-binding protein Spo0j-like protein gidB 2874224 - 2873505 - | glucose-inhibited division protein B gidA 2876101 - 2874224 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 2877547 - 2876168 - | tRNA modification GTPase TrmE rnpA 2878051 - 2877704 - | ribonuclease P TERM 2997 2878177 - 2878156 - R 100 -11.7 -6.02546 | opp_overlap 2878156 TTAAACGAAAAAAAA GATCACTGA TGAG TCAGTGATC TTATGCAGATAAAAC TERM 2998 2878156 - 2878177 + r 95 -11.7 -3.31144 | opp_overlap 2878156 TTAAACGAAAAAAAA GATCACTGA TGAG TCAGTGATC TTATGCAGATAAAAC rpmH 2878315 - 2878178 - | 50S ribosomal protein L34 SEQUENCE gi|14141823|ref|NC_002774.1| Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence (length 25107) TERM 1 606 - 579 - g 95 -6.5 -5.81622 | ATAAAATTAAAAAAA GAGTTAATAAA ATTTAA TTTACTAACTC AAGAACGTGTTGGCC TERM 2 731 - 686 - g 95 -14.3 -3.28119 | opp_overlap 690 698, overlap 687 690 698 716 AGCCAGTCATATCAA GGAACTTCCAAATTCACAGTT CCAG AACAATGAATTTGGAAGTTCT AGAACTGTGAATTTA TERM 3 730 - 687 - g 100 -17.8 -2.5655 | opp_overlap 690 698, overlap 686 690 698 716 GCCAGTCATATCAAG GAACTTCCAAATTCACAGTT CCAG AACAATGAATTTGGAAGTTC TAGAACTGTGAATTT TERM 4 690 - 727 + G 87 -11.5 -3.32343 | opp_overlap 687 686 690 698 716, overlap 698 AGTCATATCAAGGAA CTTCCAAATTCACAGTT CCAG AACAATGAATTTGGAAG TTCTAGAACTGTGAA TERM 5 727 - 690 - g 95 -13.7 -3.43338 | opp_overlap 690 698, overlap 687 686 698 716 AGTCATATCAAGGAA CTTCCAAATTCACAGTT CCAG AACAATGAATTTGGAAG TTCTAGAACTGTGAA TERM 6 698 - 742 + G 71 -7.4 -3.68351 | opp_overlap 690 687 686 698 716 736, overlap 690 CAAGGAACTTCCAAA TTCACAGTTCCAGAAC AATGAATTTGGAA GTTCTAGAACTGTGAA TTTAAGTGGTCAAGA TERM 7 742 - 698 - g 82 -9.6 -3.62478 | opp_overlap 690 698, overlap 690 687 686 716 736 CAAGGAACTTCCAAA TTCACAGTTCCAGAAC AATGAATTTGGAA GTTCTAGAACTGTGAA TTTAAGTGGTCAAGA TERM 8 770 - 716 - g 87 -10.2 -3.80174 | opp_overlap 690 698, overlap 690 687 686 698 736 ACAGTTCCAGAACAA TGAATTTGGAAGTTCTAGAACTGTGA ATT TAAGTGGTCAAGAACTTCCAAATTCA CAGTCTAATGATACT repA 315 - 1250 + | replication initiator protein A TERM 9 1303 - 1324 + T 75 -5.9 -4.68908 | opp_overlap 1283 1280 1302, overlap 1283 TATCTTTAATTAGAT GTTCTCTTA ACTG TAAGCGAAC TTTATTTTCAATGAA TERM 10 1359 - 1388 + T 100 -9.5 -4.84017 | opp_overlap 1358 1359 AATTAATTAAGTAAG TGGGACTAAAA CTTTTCTT TTTTAGTCCCA TTTTTATAAACAATT TERM 11 1388 - 1359 - T 73 -9.5 -2.68014 | opp_overlap 1359, overlap 1358 AATTAATTAAGTAAG TGGGACTAAAA CTTTTCTT TTTTAGTCCCA TTTTTATAAACAATT SAVP002 2000 - 1731 - | hypothetical protein TERM 12 2159 - 2137 - H 72 -4.8 -4.86033 | opp_overlap 2137, overlap 2094 2139 AAATTGGCATAAAAA TGGGCAACCA TAC TGGTTGATCA TTATAGTTCCCACAG TERM 13 3850 - 3834 - g 77 -5.2 -4.8667 | TATAGGCGATAAAAA CTTTGA AAAAG TCAAAG ACCAAACACCTAATG traA 2209 - 4131 + | hypothetical protein SAVP004 4405 - 4818 + | hypothetical protein TERM 14 4833 - 4846 + F 83 -2.3 -5.90981 | opp_overlap 4827 4833 4834, overlap 4834 AACCAAAAATAAAAA GCCGA TGTA TCGGA TTTTTTTTAGTGTAC TERM 15 4846 - 4833 - f 80 -2.3 -5.67529 | opp_overlap 4833 4834, overlap 4827 4834 AACCAAAAATAAAAA GCCGA TGTA TCGGA TTTTTTTTAGTGTAC SAVP005 4895 - 5128 + | hypotehtical protein TERM 16 5168 - 5129 - T 83 -10.2 -3.34013 | opp_overlap 5129 5139 5141, overlap 5139 TATCTTTTGAACTAA TGATAAAAAAGACGCCTA ATTT TAGGCGCCTTTTTAATAA TCTACTAACTACTTA TERM 17 5139 - 5158 + T 85 -7.8 -4.79223 | opp_overlap 5129 5139, overlap 5129 5141 ACTAATGATAAAAAA GACGCCTA ATTT TAGGCGCC TTTTTAATAATCTAC TERM 18 5158 - 5139 - T 100 -10 -5.38249 | opp_overlap 5139 5129 5141, overlap 5129 ACTAATGATAAAAAA GACGCCTA ATTT TAGGCGCC TTTTTAATAATCTAC TERM 19 5141 - 5156 + T 70 -9 -2.67364 | opp_overlap 5139 5129, overlap 5139 5129 TAATGATAAAAAAGA CGCCTA ATTT TAGGCG CCTTTTTAATAATCT SAVP006 5881 - 5177 - | hypothetical protein TERM 20 6027 - 5980 - RH 87 -11.1 -3.30418 | gap 1, opp_overlap 5980 5979 5983 5988, overlap 5983 5988 TATGTATTAAATATA TAATAAAATAACCAC-ATGTTT TACAT AAACACGGTGGTTATTTTATCA ATTTTTATATTGCCT TERM 21 6024 - 5983 - RH 89 -10.6 -3.78419 | gap 1, opp_overlap 5983 5980 5979 5988, overlap 5980 5988 GTATTAAATATATAA TAAAATAACCAC-ATGTTT TACAT AAACACGGTGGTTATTTTA TCAATTTTTATATTG TERM 22 6019 - 5988 - RH 80 -6.1 -4.91357 | gap 1, opp_overlap 5988 5983 5980 5979, overlap 5983 5980 AAATATATAATAAAA TAACCAC-ATGTTT TACAT AAACACGGTGGTTA TTTTATCAATTTTTA SAVP008 6730 - 6032 - | hypothetical protein SAVP007 6564 - 6833 + | hypothetical protein SAVP009 6894 - 6992 + | hypothetical protein TERM 23 7017 - 7058 + T 77 -8.8 -3.66803 | opp_overlap 7021, overlap 7019 7020 ACAGTAATAACACCA AAAAGAGCCCGATAACTA CTGGAA TAGTTATCGGGCTCGGTG TTTACCATGTTCAAC TERM 24 7019 - 7056 + T 93 -11.4 -3.41302 | opp_overlap 7021, overlap 7017 7020 AGTAATAACACCAAA AAGAGCCCGATAACTA CTGGAA TAGTTATCGGGCTCGG TGTTTACCATGTTCA TERM 25 7020 - 7055 + T 100 -14.9 -2.64299 | opp_overlap 7021, overlap 7019 7017 GTAATAACACCAAAA AGAGCCCGATAACTA CTGGAA TAGTTATCGGGCTCG GTGTTTACCATGTTC TERM 26 7054 - 7021 - T 100 -19.1 -4.93316 | opp_overlap 7020 7019 7017 TAATAACACCAAAAA GAGCCCGATAACTAC TGGA ATAGTTATCGGGCTC GGTGTTTACCATGTT SAVP010 8080 - 7169 - | hypothetical protein TERM 27 8293 - 8242 - H 100 -14.8 -4.85918 | opp_overlap 8247, overlap 8243 8247 8253 TACTATAGAAGAAAA TGCAAGCAAAAGCATATAAACAAC AAAT GTTGTTTATATGCTTTTGCTTTTT TGTTAATTGGAGAGG TERM 28 8292 - 8243 - H 100 -18.3 -3.50466 | opp_overlap 8247, overlap 8242 8247 8253 ACTATAGAAGAAAAT GCAAGCAAAAGCATATAAACAAC AAAT GTTGTTTATATGCTTTTGCTTTT TTGTTAATTGGAGAG TERM 29 8247 - 8288 + H 100 -23.5 -5.5604 | opp_overlap 8247 8243 8242 8253 TAGAAGAAAATGCAA GCAAAAGCATATAAACAAC AAAT GTTGTTTATATGCTTTTGC TTTTTTGTTAATTGG TERM 30 8288 - 8247 - H 100 -23.5 -3.4724 | opp_overlap 8247, overlap 8243 8242 8253 TAGAAGAAAATGCAA GCAAAAGCATATAAACAAC AAAT GTTGTTTATATGCTTTTGC TTTTTTGTTAATTGG TERM 31 8282 - 8253 - H 100 -15.3 -4.48175 | opp_overlap 8247, overlap 8247 8243 8242 AAAATGCAAGCAAAA GCATATAAACAAC AAAT GTTGTTTATATGC TTTTGCTTTTTTGTT SAVP011 8314 - 8433 + | hypothetical protein truncated-res 8738 - 8499 - | hypothetical protein SAVP012 8647 - 8546 - | hypothetical protein tnpE 9482 - 8808 - | transposase TERM 32 8848 - 8877 + g 77 -5.7 -4.96848 | opp_overlap 8850 8851, overlap 8851 TCGTGGCATGGCGAA AATCCGTAGATCT GAAG AGATCTGCGGTTC TTTTTATATAGAGCG TERM 33 8874 - 8851 - G 77 -9.6 -3.06515 | opp_overlap 8848 8851, overlap 8850 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 34 8851 - 8874 + g 100 -11.8 -4.58943 | opp_overlap 8851 8850, overlap 8848 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 35 8897 - 8919 + g 79 -5.7 -5.09173 | opp_overlap 8897 TATATAGAGCGTAAA TACATTCAA TGCCT TTGAGTGTA TTTTTTGCCGTATTG TERM 36 9437 - 9423 - G 76 -10 -2.90763 | TGCATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCTTT SAVP015 10194 - 9520 - | hypothetical protein TERM 37 10327 - 10311 - R 95 -6.5 -6.01725 | opp_overlap 10311 AATAAAAAGAAAAAA GGCCTTT TTT ACAGGCC TTATAAATCTAAATC SAVP016 11107 - 10328 - | hypothetical protein TERM 38 11024 - 11036 + g 71 -3.4 -5.20534 | opp_overlap 11024 GAAAGAATAATAATA TGGT CTTGA ACCA TTTTTATTGCTTGAT TERM 39 11156 - 11138 - R 100 -13.2 -5.52096 | opp_overlap 11140 AAATTTAATAAAAAA GAGGCGTA ATA TACGCCTC CTTAAAACAATATAA TERM 40 11140 - 11154 + r 76 -10 -2.71483 | opp_overlap 11138 ATTTAATAAAAAAGA GGCGTA ATA TACGCC TCCTTAAAACAATAT res 11946 - 11389 - | putative resolvase SAVP018 12241 - 12657 + | hypothetical protein TERM 41 12662 - 12687 + T 79 -8.5 -3.92716 | gap 1, opp_overlap 12662 GCGTACAGTAAAAAA CACCAATGA-AT TTA ATGTCATTGGTG TTTGAATTATTTTAA TERM 42 12687 - 12662 - T 93 -8.5 -5.21709 | gap 1, opp_overlap 12662 GCGTACAGTAAAAAA CACCAATGA-AT TTA ATGTCATTGGTG TTTGAATTATTTTAA SAVP019 13535 - 12699 - | hypothetical protein SAVP020 13824 - 13522 - | hypothetical protein TERM 43 13592 - 13582 - GR 76 -4 -5.28176 | opp_overlap 13582 TTTATCTATAAAAAA GAAA GTC TTTC CGTTTTTCTTAATAG SAVP021 13987 - 13670 - | hypothetical protein TERM 44 14034 - 13992 - R 85 -8.1 -4.63218 | gap 1, overlap 13995 CCCCTGTTAATAAAA TA-AGTATTAAAGAAATGAG TTAC CCCACCTCTTTAATACTGTA GGCTAATTGATATTG TERM 45 14030 - 13995 - R 100 -11.4 -4.43307 | overlap 13992 CTGTTAATAAAATAA GTATTAAAGAAATGAG TTAC CCCACCTCTTTAATAC TGTAGGCTAATTGAT SAVP022 14651 - 14037 - | hypothetical protein tnpG 15455 - 14781 - | transposase TERM 46 14824 - 14847 + g 82 -7.4 -4.58943 | opp_overlap 14824 14823 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 47 15674 - 15701 + H 100 -14.3 -5.1287 | opp_overlap 15674 GCATAGATGCACCAA TCCCCTCACTA CGGCAA TAGTGAGGGGA TTTTTTAGGTGTGGC TERM 48 15701 - 15674 - H 100 -15 -3.21354 | opp_overlap 15674 GCATAGATGCACCAA TCCCCTCACTAC GGCA ATAGTGAGGGGA TTTTTTAGGTGTGGC TERM 49 16031 - 16045 + G 76 -10 -2.90763 | AAGGACGTCATCACT GTAGCC GTT GGCTAC TATCTAAGATATGCG TERM 50 16571 - 16549 - g 79 -5.7 -5.09173 | opp_overlap 16549 CAATACGGCAAAAAA TACACTCAA AGGCA TTGAATGTA TTTACGGATTATATA TERM 51 16592 - 16617 + G 81 -8.3 -4.11216 | opp_overlap 16585 16593, overlap 16593 GGATTATATAAAAAA ACCGTAGGTCT CTTC AGATCTACGGA TTTTCACCATGCCAC TERM 52 16593 - 16616 + G 85 -11.8 -3.06515 | opp_overlap 16585 16593, overlap 16592 GATTATATAAAAAAA CCGTAGGTCT CTTC AGATCTACGG ATTTTCACCATGCCA TERM 53 16616 - 16593 - g 100 -9.6 -5.74122 | opp_overlap 16592 16593, overlap 16585 GATTATATAAAAAAA CCGTAGGTCT CTTC AGATCTACGG ATTTTCACCATGCCA tnpF 15986 - 16651 + | transposase truncated-tnp 16762 - 17094 + | putative transposase aacA 18663 - 17224 - | N-acetyltransferase SAVP027 19068 - 18664 - | hypothetical protein truncated-tnp 19397 - 19113 - | putative transposase tnpE 20222 - 19548 - | transposase TERM 54 19588 - 19617 + g 77 -5.7 -4.96848 | opp_overlap 19590 19591, overlap 19591 TCGTGGCATGGCGAA AATCCGTAGATCT GAAG AGATCTGCGGTTC TTTTTATATAGAGCG TERM 55 19591 - 19614 + g 100 -11.8 -4.58943 | opp_overlap 19590 19591, overlap 19588 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 56 19614 - 19591 - G 77 -9.6 -3.06515 | opp_overlap 19591 19588, overlap 19590 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 57 19637 - 19659 + g 79 -5.7 -5.09173 | opp_overlap 19637 TATATAGAGCGTAAA TACATTCAA TGCCT TTGAGTGTA TTTTTTGCCGTATTG TERM 58 20177 - 20163 - G 76 -10 -2.90763 | TGCATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCTTT truncated-res 20598 - 20260 - | truncated resolvase TERM 59 20760 - 20782 + r 81 -7.1 -4.52589 | opp_overlap 20760 20781 AATATCCAAGAAAAA CCTCTTAAT ATTAA GTTAAGAGG TTTTGTGTCAAAAAC TERM 60 20782 - 20760 - R 81 -6.4 -5.12971 | opp_overlap 20760, overlap 20781 AATATCCAAGAAAAA CCTCTTAA TATTAAG TTAAGAGG TTTTGTGTCAAAAAC qacR 21415 - 20849 - | transcriptional regulator TERM 61 21261 - 21272 + g 77 -3 -5.40279 | TCTATATTTAAAATT TCTA AAAA TAGA TTTTCTTTTGTTTTA TERM 62 21455 - 21437 - H 72 -8.2 -3.25015 | TTTAATGAGTATTAA GTACTATC AAT GATAGCAC AAAAAATTCAAAGAA TERM 63 21583 - 21540 - H 77 -8.3 -3.77789 | overlap 21546 ATGTAAAAAAATAGA TTATAATCCTTATAGACCG ATCGCA CGGTCTATAAGGATTGGAG GGAACTTAAATGATT TERM 64 21577 - 21546 - H 100 -16.1 -3.57173 | overlap 21540 AAAAATAGATTATAA TCCTTATAGACCG ATCGCA CGGTCTATAAGGA TTGGAGGGAACTTAA qacA 21593 - 23137 + | QacA protein TERM 65 23202 - 23230 + F 100 -11.9 -5.64873 | opp_overlap 23202 AGTAATAGTTAAAAA GTAGAACCATTAA TTT TAAATGGTTCTAC TTTTTTATTATTAAG TERM 66 23230 - 23202 - f 100 -11.9 -4.75308 | opp_overlap 23202 AGTAATAGTTAAAAA GTAGAACCATTAA TTT TAAATGGTTCTAC TTTTTTATTATTAAG SAVP033 23342 - 23902 + | hypotehtical protein TERM 67 23899 - 23878 - T 75 -4.6 -5.04987 | opp_overlap 23878, overlap 23865 AATATTTTTAAAAAA TAAAAAGT ATGATG ACTTTTTA TAATTATTCGATTTA TERM 68 24166 - 24219 + T 100 -13 -2.60392 | gap 2, opp_overlap 24179, overlap 24166 24179 TTATCAGAAGTTTGA TTCACATTAAAAAGGCACAACAAGTT CATG AACTTGT-GTGCCTTTTTAAT-TGCA ATTAGTTACCAAATA TERM 69 24166 - 24220 + T 93 -11.4 -3.34344 | gap 3, opp_overlap 24179, overlap 24166 24179 TTATCAGAAGTTTGA TT-CACATTAAAAAGGCACAACAAGTT CATG AACTTGT-GTGCCTTTTTAAT-TGCAA TTAGTTACCAAATAA TERM 70 24207 - 24179 - T 100 -11.2 -4.81551 | gap 1, opp_overlap 24166 24166 24179 GATTCACATTAAAAA GGCACAACAAGTT CATG AACTTGT-GTGCC TTTTTAATTGCAATT TERM 71 24179 - 24207 + T 100 -11.2 -4.87893 | gap 1, opp_overlap 24179, overlap 24166 24166 GATTCACATTAAAAA GGCACAACAAGTT CATG AACTTGT-GTGCC TTTTTAATTGCAATT SAVP034 24982 - 24221 - | replication-associated protein