TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.66318 %AT, 2303270 nt, 11995 terms. Intergenic: 0.709459 %AT, H2T: 374162 nt, 2829 terms; T2T: 108802 nt, 2403 terms; H2H: 100674 nt, 1526 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|29165615|ref|NC_002745.2| Staphylococcus aureus subsp. aureus N315, complete genome (length 2814816) dnaA 517 - 1878 + | chromosomal replication initiation protein TERM 1 2433 - 2423 - g 84 -4 -5.69473 | GATATTATAAAAAAA TTAC CTG GTAA AGATGTTAAATTATC dnaN 2156 - 3289 + | DNA polymerase III subunit beta TERM 2 3345 - 3297 - f 80 -6.3 -4.91852 | opp_overlap 3303 3307 3337, overlap 3303 CTTACTAAAAATAAA TATAAATAAAGGATGACGT GATTAATTAAA ACGTCATCCTTTATTTTTT GGCAAAAATAATTCT TERM 3 3339 - 3303 - f 100 -9.7 -4.56642 | opp_overlap 3303 3307 3337, overlap 3297 AAAAATAAATATAAA TAAAGGATGACGT GATTAATTAAA ACGTCATCCTTTA TTTTTTGGCAAAAAT TERM 4 3303 - 3339 + F 100 -9.7 -5.00884 | opp_overlap 3303 3297, overlap 3307 3337 AAAAATAAATATAAA TAAAGGATGACGT GATTAATTAAA ACGTCATCCTTTA TTTTTTGGCAAAAAT TERM 5 3307 - 3335 + F 81 -6.1 -5.04249 | opp_overlap 3303 3297, overlap 3303 ATAAATATAAATAAA GGATGACGT GATTAATTAAA ACGTCATCC TTTATTTTTTGGCAA SA0003 3670 - 3915 + | hypothetical protein TERM 6 4471 - 4457 - g 79 -8.6 -3.84246 | GTTGGAAGTATTAAA TCAGCA GTT TGCTGA ATATGCAATGAAAGT recF 3912 - 5024 + | recombination protein F gyrB 5034 - 6968 + | DNA gyrase subunit B gyrA 7005 - 9674 + | DNA gyrase subunit A TERM 7 9712 - 9683 - T 100 -12.3 -5.97979 | opp_overlap 9683 AGAATAATAAAAAAA TAAGACTTCCCTA TATG TAGGGGAGTCTTA TTTTTATGCTAGAAA TERM 8 9683 - 9712 + T 100 -14.5 -4.91109 | opp_overlap 9683 AGAATAATAAAAAAA TAAGACTTCCCTA TATG TAGGGGAGTCTTA TTTTTATGCTAGAAA SA0007 10592 - 9762 - | hypothetical protein TERM 9 10779 - 10793 + H 71 -8.6 -2.83641 | TTAATATCCTTTAAC GCACTA CAA TAGTGC TCTGATAATAGGTTA hutH 10900 - 12414 + | histidine ammonia-lyase TERM 10 12603 - 12614 + F 70 -5.8 -4.25658 | opp_overlap 12603 12602 ATTTAAAAGAACAAT CGGT GATA ACCG TTATTTTAGTGAAGT TERM 11 12689 - 12715 + F 100 -17.4 -6.14618 | opp_overlap 12694 GGGTGGCAACGCGTA GACCACGTCCCT TGT AGGGATGTGGTC TTTTTTTATTTTCTA serS 12793 - 14079 + | seryl-tRNA synthetase TERM 12 14185 - 14164 - f 73 -5.8 -4.67556 | opp_overlap 14164, overlap 14166 ATAATATTTTAAAAA GTGGTGAC GAAGCT GTCGCCAC TTTTTTTGTGCTGTA TERM 13 14164 - 14185 + F 100 -8.7 -5.69473 | opp_overlap 14164 14166 ATAATATTTTAAAAA GTGGTGACG AAGC TGTCGCCAC TTTTTTTGTGCTGTA TERM 14 14635 - 14600 - f 91 -11.2 -3.137 | opp_overlap 14597 14600 14602 14604 ATGAAGATGATTGAA GACGCCAGTATGTCTA ACCT CAGACAAACTGGTGTC TAATGTTATTGCTTA TERM 15 14600 - 14635 + F 100 -12.7 -2.88074 | opp_overlap 14600, overlap 14597 14602 14604 ATGAAGATGATTGAA GACGCCAGTATGTCT AACCTC AGACAAACTGGTGTC TAATGTTATTGCTTA TERM 16 14602 - 14633 + F 75 -9.5 -2.97825 | opp_overlap 14600, overlap 14600 14597 14604 GAAGATGATTGAAGA CGCCAGTATGTCT AACCTC AGACAAACTGGTG TCTAATGTTATTGCT SA0010 14730 - 15425 + | hypothetical protein SAS001 15422 - 15751 + | hypothetical protein TERM 17 16061 - 16087 + F 91 -4.5 -5.95539 | TGATAAGTATAAAGA CTTCTTACTTT TCAAT AGGGTGAGAAG TTTTTTTGTTTAAGG SA0011 16093 - 17082 + | hypothetical protein SA0012 17318 - 18313 + | hypothetical protein SA0013 18328 - 20295 + | hypothetical protein rplI 20292 - 20738 + | 50S ribosomal protein L9 TERM 18 20897 - 20865 - g 77 -9.2 -3.23711 | opp_overlap 20867 20870, overlap 20867 20870 TCCAGAATTGATTAA TACTACTCAGGAAG TTTTG CTTCCTGAGTCGTT TTATAGGGGTGCCCA TERM 19 20867 - 20895 + G 100 -12.5 -4.38712 | opp_overlap 20865 20867 20870, overlap 20870 CAGAATTGATTAATA CTACTCAGGAAGT TTT GCTTCCTGAGTCG TTTTATAGGGGTGCC TERM 20 20895 - 20867 - g 89 -11.8 -3.18033 | opp_overlap 20867 20870, overlap 20865 20870 CAGAATTGATTAATA CTACTCAGGAAG TTTTG CTTCCTGAGTCG TTTTATAGGGGTGCC TERM 21 20870 - 20892 + G 91 -12.8 -3.17598 | opp_overlap 20867 20865 20870, overlap 20867 AATTGATTAATACTA CTCAGGAAGT TTT GCTTCCTGAG TCGTTTTATAGGGGT TERM 22 20892 - 20870 - g 84 -12.1 -2.78266 | opp_overlap 20870 20867, overlap 20867 20865 AATTGATTAATACTA CTCAGGAAG TTTTG CTTCCTGAG TCGTTTTATAGGGGT TERM 23 21028 - 21016 - g 85 -10.5 -3.34895 | opp_overlap 21014 GGTACGTTGAATGAA GCGGG TGG CCCGC AATATCTTGCAGAGT dnaC 20770 - 22170 + | replicative DNA helicase TERM 24 22181 - 22216 + F 74 -2.1 -5.64321 | gap 2, opp_overlap 22192 TGTAAAAAAGTTTTT CCGTACAA--TAATCAT TAAG ATGATAAAATTGTACGG TTTTTATTTTGTTCT purA 22448 - 23731 + | adenylosuccinate synthetase TERM 25 23772 - 23797 + F 85 -7.6 -4.72863 | opp_overlap 23772 ATTATAAATACATGA GCCTTCTATC TTTATT GGTAGGAGGC TTTTGCTTTGTTTGC TERM 26 24342 - 24321 - f 100 -13.1 -3.91144 | opp_overlap 24321 TCGAGACCGTACAAA TGCCTATCC AAGA GGATAGGCA TTTTTTTGCGTTTAA TERM 27 24321 - 24342 + F 100 -13.1 -5.58209 | opp_overlap 24321 TCGAGACCGTACAAA TGCCTATCC AAGA GGATAGGCA TTTTTTTGCGTTTAA TERM 28 24380 - 24418 + F 93 -8.5 -5.03227 | gap 2, opp_overlap 24378 24380 TTAATAAAAGATATA TGGACGAAT-GAT-AATCA TAT TGATTTATCTGTTCGTCCA TTTTCTTTATAATGT vicR 24928 - 25635 + | response regulator vicK 25648 - 27474 + | two-component sensor histidine kinase SA0019 27440 - 28801 + | hypothetical protein SA0020 28802 - 29590 + | hypothetical protein SA0021 29979 - 30779 + | hypothetical protein TERM 29 30787 - 30833 + F 78 -3 -5.55695 | gap 1, opp_overlap 30786, overlap 30788 CAATATAAATGAGAG TCACCCTATAAAGTTCGGCAC TGCTGT GAGACG-ACTTTATCGGGTGC TTTTTTATGTTATTG TERM 30 32905 - 32891 - g 72 -5 -4.68424 | overlap 32893 CAAGTTATTTAAAAA CAGCTA ACA TAGCTA AGTATGATACGACAG SA0022 31006 - 33324 + | hypothetical protein TERM 31 33341 - 33376 + F 100 -9.2 -5.60993 | opp_overlap 33329 33343, overlap 33343 ATATATTGAAAACAA TACTACTGTATTTCTT AAAT AAGAGGTACGGTAGTG TTTTTTTATGGAAAA TERM 32 33343 - 33374 + F 100 -9.6 -4.45201 | opp_overlap 33343, overlap 33341 ATATTGAAAACAATA CTACTGTATTTCTT AAAT AAGAGGTACGGTAG TGTTTTTTTATGGAA TERM 33 34087 - 34106 + G 73 -7.8 -3.76048 | opp_overlap 34083 CAGCAAAATGACATT CCCACATC AAAT GATGCGGG TTGTGTTAATTGAGC orfX 33692 - 34171 + | hypothetical protein TERM 34 34783 - 34828 + G 77 -8.8 -3.53811 | opp_overlap 34789 TCCGGAAGGAGAAGG CATAT-ACTTATCTTTGAATCA AGGA TGGT-CAAAGATAAGTGATATG TTTCCGCGGGATAAA SA0024 34454 - 35749 + | hypothetical protein TERM 35 35894 - 35866 - f 95 -11.9 -3.59262 | opp_overlap 35866, overlap 35869 GTCCACAGTCTGAAA CAAGATTCCTATA TTC TTTAGGAATCTTG TTTTTTCTATTTTTA TERM 36 35866 - 35894 + F 100 -11.9 -5.69068 | opp_overlap 35866 35869 GTCCACAGTCTGAAA CAAGATTCCTATA TTC TTTAGGAATCTTG TTTTTTCTATTTTTA TERM 37 35891 - 35869 - f 76 -7.8 -3.93256 | opp_overlap 35866, overlap 35866 CACAGTCTGAAACAA GATTCCTATA TTC TTTAGGAATC TTGTTTTTTCTATTT SA0025 36164 - 36403 + | hypothetical protein SA0026 37109 - 36435 - | transposase for IS-like element TERM 38 36478 - 36501 + g 82 -7.4 -4.58943 | opp_overlap 36477 36478 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 39 37064 - 37050 - G 76 -10 -2.90763 | TGTATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT SA0027 37406 - 37200 - | truncated replication protein for plasmid SA0028 38204 - 37410 - | truncated replication protein for pUB110 plasmid SAS002 38309 - 38229 - | hypothetical protein TERM 40 38417 - 38401 - R 78 -3 -5.5943 | gap 1, opp_overlap 38402 38403, overlap 38403 AAACCATCAAAAAAA GACACCT TTTC AGGTG-C TTTTTTTATTTTATA TERM 41 38402 - 38417 + r 88 -3.2 -6.14618 | opp_overlap 38401 38403, overlap 38403 AACCATCAAAAAAAG ACACCT TTTC AGGTGC TTTTTTTATTTTATA TERM 42 38416 - 38403 - R 76 -6.7 -4.41456 | opp_overlap 38402 38403, overlap 38401 ACCATCAAAAAAAGA CACCT TTTC AGGTG CTTTTTTTATTTTAT TERM 43 38403 - 38416 + r 74 -6.7 -4.25111 | opp_overlap 38403 38401, overlap 38402 ACCATCAAAAAAAGA CACCT TTTC AGGTG CTTTTTTTATTTTAT pre 39690 - 38428 - | plasmid recombination enzyme TERM 44 39096 - 39107 + g 71 -3 -5.08015 | CTAGAAAATCAATCT CTTT TTCC AAAG TTTGTTTTTTAAATT TERM 45 39917 - 39888 - g 93 -3.5 -6.11392 | gap 1, opp_overlap 39889 39899 39907, overlap 39889 AAAGAAACAAAAAAA CCTGCCCTCTGCCA CCT CAGCAAAGGGG-GG TTTTGCTCTCGTGCT SA0030 39799 - 39939 + | hypothetical protein TERM 46 40125 - 40148 + G 84 -8.2 -4.63932 | opp_overlap 40125 ACTCAAAATAAAAAA GATACAAGAG AGGT CTCTCGTATC TTTTATTCAGCAATC TERM 47 40148 - 40125 - g 100 -10.4 -5.80951 | opp_overlap 40125 ACTCAAAATAAAAAA GATACAAGAG AGGT CTCTCGTATC TTTTATTCAGCAATC TERM 48 40150 - 40183 + G 89 -11.9 -3.24386 | AGGTCTCTCGTATCT TTTATTCAGCAATCG CGCC CGATTGCTGAACAGA TTAATAATAGATTTT SA0031 39987 - 40178 + | hypothetical protein bleO 40601 - 40197 - | bleomycin resistance protein aadD 41588 - 40818 - | kanamycin nucleotidyltransferase SA0034 42455 - 41781 - | transposase for IS-like element TERM 49 41824 - 41847 + g 82 -7.4 -4.58943 | opp_overlap 41824 41823 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 50 42410 - 42396 - G 76 -10 -2.90763 | TGTATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT SA0035 42539 - 42880 + | HMG-CoA synthase TERM 51 42937 - 42984 + F 83 -3.2 -5.80817 | gap 2, opp_overlap 42937 CTAACTCGAAATAAA TAAGCATATCAC--TAAACT GATTTTTTAA AGTTTACAGTGATATGCTTA TTTTTTTATCTTACG TERM 52 43174 - 43155 - f 71 -5.8 -4.45399 | AGAGGAATAGTAAAA GCAATTCT AAGT AAAATTGC AGATAAGAGGTTTGT SA0036 43717 - 44460 + | hypothetical protein SA0037 44557 - 44985 + | hypothetical protein TERM 53 45033 - 44983 - T 100 -15.9 -2.67428 | gap 1, opp_overlap 44983 44986 44991, overlap 44986 44991 CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA TERM 54 44983 - 45033 + T 100 -15.9 -3.35912 | gap 1, opp_overlap 44983 44986 44991, overlap 44986 44991 CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA TERM 55 44986 - 45030 + T 100 -13.2 -3.81089 | gap 1, opp_overlap 44983 44986 44991, overlap 44983 44991 ATTAATAATTCATAA TAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTG TTATTCATCTATATC TERM 56 45030 - 44986 - T 100 -13.2 -3.48153 | gap 1, opp_overlap 44986 44983 44991, overlap 44983 44991 ATTAATAATTCATAA TAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTG TTATTCATCTATATC TERM 57 45025 - 44991 - T 100 -13.1 -4.80959 | gap 1, opp_overlap 44986 44983 44991, overlap 44986 44983 TAATTCATAATAAAA CAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTG TTTTGTTATTCATCT TERM 58 44991 - 45025 + T 100 -10.9 -4.93661 | gap 1, opp_overlap 44991 44986 44983, overlap 44986 44983 TAATTCATAATAAAA CAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTG TTTTGTTATTCATCT mecA 47037 - 45031 - | penicillin binding protein 2 prime TERM 59 45862 - 45873 + g 74 -2.2 -5.48063 | AATCTGGAACTTGTT GAGC AGAG GTTC TTTTTTATCTTCGGT TERM 60 47057 - 47088 + H 81 -8.2 -4.04206 | opp_overlap 47057 47059, overlap 47059 ATCCTCCTTATATAA GACTACATTTGTAG TATA TTACAAATGTAGTA TTTATGTCAAAATAA TERM 61 47059 - 47086 + H 90 -10.8 -3.615 | opp_overlap 47057 47059, overlap 47057 CCTCCTTATATAAGA CTACATTTGTAG TATA TTACAAATGTAG TATTTATGTCAAAAT TERM 62 47086 - 47059 - H 80 -10.1 -3.31726 | opp_overlap 47059 47057, overlap 47057 CCTCCTTATATAAGA CTACATTTGTA GTATAT TACAAATGTAG TATTTATGTCAAAAT mecR1 47137 - 48894 + | methicillin resistance protein TERM 63 49018 - 49007 - g 72 -5.8 -4.42081 | overlap 49010 AATACAAATGCAAAA GGAC TGGA GTCC AAAAACCATTCGTAC mecI 48894 - 49265 + | methicillin resistance regulatory protein TERM 64 49285 - 49268 - f 90 -7.1 -5.55001 | GAATAAAAAATAAAA TTGTTGT GTTT ACAACAA TACATAGAAAACAGA TERM 65 49339 - 49290 - f 100 -14.7 -3.31208 | opp_overlap 49297, overlap 49297 GTTTACAACAATACA TAGAAAACAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTGTTTTTTA GTTGAAAAAATTAAC TERM 66 49297 - 49332 + F 100 -10.6 -5.26875 | opp_overlap 49290 49297 ACAATACATAGAAAA CAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTG TTTTTTAGTTGAAAA TERM 67 49332 - 49297 - f 100 -12.8 -4.69028 | opp_overlap 49297, overlap 49290 ACAATACATAGAAAA CAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTG TTTTTTAGTTGAAAA TERM 68 49955 - 49972 + G 71 -3.5 -5.18866 | TATTCTTCTGAAGGT TAATCAT CTTT ATGGTTA TTTTATTTCTTTGGA xylR 49752 - 50882 + | hypothetical protein TERM 69 50968 - 50934 - T 100 -17.4 -5.60993 | opp_overlap 50934 GTCTTTATAAAAAAA TCCCTCAATCCGAA TTGAATT TTCGGATTGAGGGA TTTTTATAGTTCTAT TERM 70 50934 - 50968 + T 100 -17.4 -5.02439 | opp_overlap 50934 GTCTTTATAAAAAAA TCCCTCAATCCGAA TTGAATT TTCGGATTGAGGGA TTTTTATAGTTCTAT SA0042 51388 - 50996 - | hypothetical protein SA0043 52330 - 51392 - | hypothetical protein TERM 71 52330 - 52316 - G 72 -5.8 -4.37092 | ATTGTCTTCATAAAA TTGTTT GAA AAACAA AAAAAACTCCTTTTT SA0044 53427 - 52363 - | hypothetical protein TERM 72 53479 - 53508 + H 100 -8.7 -5.22258 | opp_overlap 53478 53487 AACGGATAGAATCAT TTGCCAAATACCT ATAG GGGTATTTGACAA TTTTGTTTTAATTTA SA0045 53563 - 53823 + | hypothetical protein SA0046 53823 - 54467 + | hypothetical protein TERM 73 54672 - 54719 + T 76 -2.8 -5.57396 | opp_overlap 54676, overlap 54673 54675 54676 TATTTCAAAAATAGT AAAACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGCTGA TTTTTTATTCATTGT TERM 74 54675 - 54716 + T 76 -8.9 -3.51774 | opp_overlap 54676, overlap 54673 54672 54676 TTCAAAAATAGTAAA ACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGC TGATTTTTTATTCAT TERM 75 54715 - 54676 - T 100 -14.6 -4.60746 | opp_overlap 54675 54673 54672 54676 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA TERM 76 54676 - 54715 + T 100 -12.4 -2.69438 | opp_overlap 54676, overlap 54675 54673 54672 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA SA0047 55474 - 54806 - | hypothetical protein TERM 77 54949 - 54971 + g 82 -4.2 -5.45652 | ATGATTTAGATGTGT TGTGATTATA AAT TCTAATCGCA TTTTTTATTCCAAAT TERM 78 55959 - 55921 - H 74 -9.2 -2.86315 | overlap 55893 55920 55916 CAAATCAAAATTAAT TGGTTATAATGAAC GCTTAATGTCA GTTCATTATAACCA GTAAGGAGAAGGTTA ermA 56002 - 56733 + | rRNA methylase TERM 79 56781 - 56740 - T 75 -7.5 -4.10552 | gap 1, opp_overlap 56744 56748, overlap 56744 56748 TTTCACTAAATTAAA GTAATAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTATT-C TTCCCAAAAATTGTT TERM 80 56744 - 56778 + T 81 -9.5 -3.61894 | opp_overlap 56740 56744 56748, overlap 56748 ACTAAATTAAAGTAA TAAAGCGTTCTCT AATTTCACA AGAGGACGCTTTA TTCTTCCCAAAAATT TERM 81 56778 - 56744 - T 81 -9.4 -3.66117 | opp_overlap 56744 56748, overlap 56740 56748 ACTAAATTAAAGTAA TAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTA TTCTTCCCAAAAATT TERM 82 56774 - 56748 - T 71 -5.8 -4.42206 | opp_overlap 56744 56748, overlap 56744 56740 AATTAAAGTAATAAA GCGTTCTCTAAT TTC ACAAGAGGACGC TTTATTCTTCCCAAA TERM 83 56748 - 56774 + T 71 -5.9 -4.44667 | opp_overlap 56748 56744 56740, overlap 56744 AATTAAAGTAATAAA GCGTTCTCT AATTTCACA AGAGGACGC TTTATTCTTCCCAAA ant(9) 57641 - 56859 - | O-nucleotidylltransferase(9) tnpC 58169 - 57792 - | transposase for Tn554 tnpB 60068 - 58176 - | transposase B for Tn554 tnpA 61150 - 60065 - | transposase A for Tn554 radC 61586 - 61269 - | hypothetical protein SA0054 62125 - 61607 - | hypothetical protein SA0055 62442 - 62131 - | hypothetical protein TERM 84 62201 - 62168 - G 70 -2.4 -5.25699 | opp_overlap 62170, overlap 62169 62170 ATCACATAATAAAAA GCGTCTACGCCATC TTCACG AATGACGTAGACTT TCTTAGGTAATGCAT TERM 85 62199 - 62170 - G 73 -9.4 -2.83191 | opp_overlap 62170, overlap 62169 62168 CACATAATAAAAAGC GTCTACGCCATC TTCACG AATGACGTAGAC TTTCTTAGGTAATGC TERM 86 62170 - 62199 + g 71 -6.5 -4.21974 | opp_overlap 62170 62169 62168 CACATAATAAAAAGC GTCTACGCCAT CTTCACGA ATGACGTAGAC TTTCTTAGGTAATGC SA0056 62879 - 62529 - | hypothetical protein TERM 87 63147 - 63166 + r 90 -10.8 -3.61089 | overlap 63158 AATAACGGGATTTTG GGATTGTG CTTG CACAATCC TTCTGCTTCTTCGAA ccrB 65025 - 63397 - | cassette chromosome recombinase B TERM 88 63433 - 63460 + g 75 -9.9 -2.50354 | opp_overlap 63434, overlap 63432 63431 63440 TTGGGGCAAAAACAA AGACGAAGTGC TGAGAT GCACTTCGTCG AGTTGTTTATTATTG TERM 89 63459 - 63434 - G 100 -13.4 -4.85782 | opp_overlap 63433 63432 63431 63440 TGGGGCAAAAACAAA GACGAAGTGC TGAGAT GCACTTCGTC GAGTTGTTTATTATT TERM 90 65047 - 65069 + r 76 -7.8 -3.91352 | overlap 65050 TCATCCTTTCTTCGT TTATGCAATC GAT GATTGCATGG TTTGATTGACGATAT TERM 91 65050 - 65066 + r 75 -9.5 -3.02166 | overlap 65047 TCCTTTCTTCGTTTA TGCAATC GAT GATTGCA TGGTTTGATTGACGA ccrA 66396 - 65047 - | cassette chromosome recombinase A TERM 92 66310 - 66328 + g 82 -9.6 -3.6393 | overlap 66309 AATATGATGTTTTTC GGCTATTG CTT CGATAGCC TGTTTCTGTGCTGCA TERM 93 66451 - 66477 + r 87 -10.9 -3.40565 | opp_overlap 66452, overlap 66437 66452 ATGAATTGATATATA AGCCCAACATC AATAA GATGTTGGGCG TTCATATTAGTCATT TERM 94 66476 - 66452 - R 100 -14.4 -3.61983 | opp_overlap 66451 66437 66452 TGAATTGATATATAA GCCCAACATC AATAA GATGTTGGGC GTTCATATTAGTCAT TERM 95 66452 - 66476 + r 100 -14.4 -2.63616 | opp_overlap 66452, overlap 66451 66437 TGAATTGATATATAA GCCCAACATC AATAA GATGTTGGGC GTTCATATTAGTCAT SA0059 68423 - 66630 - | hypothetical protein TERM 96 68323 - 68336 + g 70 -2.3 -5.27335 | overlap 68332 GCGATTTCAACTTCA GTAGG CATT CCTCC TTTTTCTTTGGGAGG SA0060 68719 - 68423 - | hypothetical protein TERM 97 68898 - 68883 - R 95 -6.1 -5.86976 | opp_overlap 68882 68883 TGACAAAATAAAAAA CGCTG ATTTAA CAGCG CTTTAAATAAAAATT SA0061 69958 - 68912 - | hypothetical protein TERM 98 70171 - 70147 - R 71 -2.1 -5.4588 | overlap 70150 70152 CAAAATTATAAAAAA GAACACCTATC ATC GATAGGCACTG AACCCCTAAAACGGG TERM 99 70168 - 70150 - R 75 -6 -4.75967 | overlap 70147 70152 AATTATAAAAAAGAA CACCTATC ATC GATAGGCA CTGAACCCCTAAAAC TERM 100 70166 - 70152 - R 82 -8.6 -3.96386 | overlap 70150 70147 TTATAAAAAAGAACA CCTATC ATC GATAGG CACTGAACCCCTAAA TERM 101 70209 - 70253 + r 100 -16.7 -5.16151 | opp_overlap 70221 TAAAAACACCATGTT CTAGGCTATTAATTCTCTGTA TTT TACAGGGGATAAGTAGCCTAG TTTTTGTTGAATTTG SA0062 70586 - 70209 - | transposase TERM 102 70392 - 70439 + g 100 -9.3 -5.08601 | gap 1 GAAACTTTCTATCGG GGCGTTATCGGCAG-GTGTTCC CTTTC GGGACATACTTCTGATAATGCC TTTTTCTTCGCATAA tnp 71051 - 70698 - | transposase TERM 103 70795 - 70780 - G 71 -7.6 -3.60098 | opp_overlap 70780 ACTCGGCAGTTCAAA TGATGC TTCT GCATCA TTCTCTGTACTCTCT TERM 104 70780 - 70795 + g 71 -7.6 -3.63762 | opp_overlap 70780 ACTCGGCAGTTCAAA TGATGC TTCT GCATCA TTCTCTGTACTCTCT SA0064 71350 - 71036 - | hypothetical protein TERM 105 71400 - 71359 - R 74 -3.3 -5.36441 | TTTTCATAGAAAAAA CACCTCCGTATG-ATTCAT TTTAAT ATGAATTCA-ACGAAAGTG TTTTTATATAATTCC SA0065 72445 - 71861 - | hypothetical protein TERM 106 72980 - 72945 - R 80 -8.7 -3.75519 | opp_overlap 72978, overlap 72953 72978 AATAAAGATAGAGAA TTATTAAATTGTTTT TGATAT AAAACAACTTAATAA AAAATTTAATTTTAG TERM 107 73178 - 73190 + r 72 -7.7 -3.59468 | ACAGGTGTTAAGTTG CTCCA ATA TGGAG TTGTCGTCTTGTTTT TERM 108 73198 - 73217 + r 70 -5.1 -4.65916 | ATATGGAGTTGTCGT CTTGTTT TATATT AAACAAG TTTTATTCAAATACA TERM 109 73494 - 73460 - R 74 -7.9 -3.85603 | gap 1, opp_overlap 73462, overlap 73458 73462 GTTATCAAATAAATA TATCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGATT TTATTGTTAGTTATT TERM 110 73492 - 73462 - R 83 -10.5 -3.50491 | gap 1, opp_overlap 73462, overlap 73460 73458 TATCAAATAAATATA TCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGA TTTTATTGTTAGTTA TERM 111 73462 - 73492 + r 100 -12.7 -4.95167 | gap 1, opp_overlap 73462 73460 73458 TATCAAATAAATATA TCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGA TTTTATTGTTAGTTA kdpE 74204 - 73509 - | hypothetical protein TERM 112 73795 - 73775 - GR 74 -9.1 -2.8474 | opp_overlap 73775, overlap 73772 GTTCATTGACAAGGA CTGATTTCG CAT CGAAATCAA TGGTTAATGGACCAT kdpD 76812 - 74179 - | hypothetical protein TERM 113 76143 - 76155 + gH 74 -9.1 -2.87026 | TGCCGCTGATAGCTA CCGCA ATA TGCGG TGTAATGTCGGTATG TERM 114 77201 - 77215 + G 80 -7.2 -4.47707 | TTGCTTTAAATGTGC CATCTA AAA TAGATG TTGTTTTTAATCCGA kdpA 77116 - 78792 + | potassium-transporting ATPase subunit A TERM 115 79304 - 79267 - g 89 -12.2 -3.18735 | opp_overlap 79279 GCAACAGTGGATGAA TCTGCGATTACAGGTG AATCTG CACCTGTAATCAAAGA AAGCGGTGGAGATTT TERM 116 80078 - 80068 - g 83 -6.8 -5.00616 | opp_overlap 80069 GGGGTGTCTAAAAAA GGTG GCA CACC GCTGGTTGTGCTTGA kdpB 78811 - 80832 + | hypothetical protein TERM 117 81204 - 81214 + G 72 -8.2 -3.41414 | opp_overlap 81203 AAAATTTCAAGTGAT GCGG TGA CCGC TTCTGGCTCTGGTTT kdpC 80880 - 81251 + | hypothetical protein TERM 118 81815 - 81845 + T 100 -9.8 -5.00412 | opp_overlap 81814 81817 TTAAAGAAAGTGAAG GAGATTAAGCAATG TAA CTTGGCTTAATCTC TTTTTGATTATATTT SA0072 82819 - 81950 - | hypothetical protein SA0073 83731 - 82829 - | hypothetical protein SAS003 83767 - 83892 + | hypothetical protein SA0074 84404 - 83925 - | hypothetical protein TERM 119 84052 - 84063 + g 74 -2.2 -5.43514 | overlap 84050 GAATTAAGGGTAGGG TAGG TATG CCTG TTTTTTGGTTCTTTT SA0075 84799 - 84467 - | hypothetical protein SA0076 85470 - 84844 - | hypothetical protein SA0077 85585 - 87093 + | hypothetical protein TERM 120 87131 - 87112 - f 82 -10.8 -2.53012 | overlap 87111 AACCTCATCATTAAC TGATACGC AGAG GCGTATCA TAAGTAAAACTAAAA SA0078 87692 - 89425 + | hypothetical protein TERM 121 89504 - 89484 - T 80 -6.9 -4.84602 | opp_overlap 89484 ACACAAACAAACAAA GGAGGAA ACTTAAA TTCCTCC TTTCCCTTATTACTC SA0079 89947 - 89609 - | hypothetical protein TERM 122 90015 - 90005 - R 79 -5.4 -5.1925 | opp_overlap 90005 CTAGAATTGAAAAAA CTTG TTA CAAG TGCATTTTCGTTCAG SA0080 91124 - 90369 - | hypothetical protein SA0081 91384 - 91124 - | hypothetical protein TERM 123 91468 - 91438 - H 79 -7.1 -4.44187 | gap 1, opp_overlap 91438 91447, overlap 91439 91440 ATAGATAAACACAAA TGTGTCAAATACCC CTAG AGGTATTTGACA-A GTTCCATTCAACCGT TERM 124 91468 - 91439 - H 74 -8.7 -3.24885 | opp_overlap 91438 91447, overlap 91438 91440 TAGATAAACACAAAT GTGTCAAATACCC CTAG AGGTATTTGACAA GTTCCATTCAACCGT TERM 125 91467 - 91440 - H 100 -12.2 -2.53847 | opp_overlap 91438 91447, overlap 91438 91439 AGATAAACACAAATG TGTCAAATACCC CTAG AGGTATTTGACA AGTTCCATTCAACCG TERM 126 92170 - 92160 - g 71 -6.8 -4.15657 | opp_overlap 92156 92155, overlap 92156 GGAGAATTAGACAAA GCTG TAG CAGC ATTGATTATTGCAAA TERM 127 92290 - 92279 - g 70 -4.4 -4.67234 | AGTTAATGTTAAAAA GCAA GGTA TTGC AAAAATGTTTGATTT TERM 128 92426 - 92396 - g 73 -4.1 -4.88407 | overlap 92402 CTACGTAATGAAAAA GAAAAATGTTGAT TCATT ACCAACACTTATC AATCAAGCTATTGAG TERM 129 92420 - 92402 - g 84 -3.9 -5.67529 | overlap 92396 AATGAAAAAGAAAAA TGTTGAT TCATT ACCAACA CTTATCAATCAAGCT SA0082 91521 - 92585 + | hypothetical protein SA0083 92616 - 93950 + | hypothetical protein SA0084 93969 - 95162 + | hypothetical protein TERM 130 95214 - 95198 - T 82 -6.7 -4.86621 | opp_overlap 95198 ATTTTTAATGAAAAA TCTTTTA CTA TAAAAGA TTAAGTATTTAAATG TERM 131 95356 - 95397 + T 100 -11.2 -5.07107 | gap 1, opp_overlap 95356 TTATGAAAATAGAAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATCATCTCACTGCTG TTTTTTAAAGGTTTA TERM 132 95397 - 95356 - T 100 -13.4 -4.48449 | gap 1, opp_overlap 95356 TTATGAAAATAGAAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATCATCTCACTGCTG TTTTTTAAAGGTTTA TERM 133 95614 - 95624 + T 89 -4 -5.95166 | TTTAATTTCATAATG TGTT GTA AACA TTTTTTTTGATTGGA SA0085 96815 - 95829 - | hypothetical protein SA0086 97124 - 97327 + | hypothetical protein SA0087 97376 - 97672 + | hypothetical protein SA0088 97871 - 98482 + | hypothetical protein TERM 134 98489 - 98510 + F 75 -4.4 -5.21709 | GAAAGATAATTAAGG GAGTGCTC ATTCAG GAGTGCTC TTTTTTGATGTCCAA TERM 135 101556 - 101544 - g 70 -4.1 -4.77896 | TAAGGAAGGTAAAAA TGAAC CGA GCTCA TTTGTAATATCGCCT SA0089 98749 - 101901 + | hypothetical protein SA0090 101958 - 102440 + | hypothetical protein TERM 136 102447 - 102473 + F 86 -7.3 -5.20154 | opp_overlap 102447 AAAAAATAACGATAA GGAGCTGGC GATTATAAA GCTAGCTCC TTTTTTAACTTATAT plc 102646 - 103632 + | 1-phosphatidylinositol phosphodiesterase precurosr TERM 137 103698 - 103653 - f 80 -10.1 -3.35176 | gap 1, opp_overlap 103655, overlap 103655 103667 CAATAATGATATTAA GACGAGTA-TGAAAATAGTTAG ATT CTAATTATTTTCACTACTCGTT TTTATTTTGAAAATA TERM 138 103696 - 103655 - f 100 -12.7 -3.2326 | gap 1, opp_overlap 103655, overlap 103653 103667 ATAATGATATTAAGA CGAGTA-TGAAAATAGTTAG ATT CTAATTATTTTCACTACTCG TTTTTATTTTGAAAA TERM 139 103655 - 103696 + F 100 -14.9 -5.45802 | gap 1, opp_overlap 103655 103653 103667 ATAATGATATTAAGA CGAGTA-TGAAAATAGTTAG ATT CTAATTATTTTCACTACTCG TTTTTATTTTGAAAA SA0092 103853 - 104623 + | hypothetical protein TERM 140 104793 - 104781 - g 77 -4.9 -5.18866 | CGGAAATAAAGAAAA GTTTT GAA AAAAC GTTGAGTATGTATCC SA0093 104675 - 105445 + | hypothetical protein TERM 141 105628 - 105616 - g 77 -4.9 -5.18866 | CGGAAATAAAGAAAA GTTTT GAA AAAAC ATTGAGTATGTATCC SA0094 105513 - 106280 + | hypothetical protein SA0095 106345 - 107115 + | hypothetical protein TERM 142 107297 - 107285 - g 77 -4.9 -5.18866 | CGGAAATAAAGAAAA GTTTT GAA AAAAC ATTGAGTATGTATCC SA0096 107182 - 107949 + | hypothetical protein SA0097 108046 - 110283 + | hypothetical protein TERM 143 110324 - 110296 - f 77 -7.6 -4.05816 | opp_overlap 110296, overlap 110286 TAAAATGATCACAAA TCACAAATTTTG ATATA CATAATTTGTGA TTTTTTATATTCAAA TERM 144 110296 - 110324 + F 95 -7.6 -5.47159 | opp_overlap 110286 110296 TAAAATGATCACAAA TCACAAATTTTG ATATA CATAATTTGTGA TTTTTTATATTCAAA SA0098 110434 - 111612 + | hypothetical protein TERM 145 112373 - 112361 - g 79 -4.1 -5.25803 | AATGTTGAGAAAAAA GTAGA TAA TCCAC TTATTGATTTTAAAT SA0099 111614 - 113002 + | hypothetical protein TERM 146 113133 - 113174 + T 84 -9 -4.29073 | gap 1, opp_overlap 113136, overlap 113136 ATAAATATAAATGAA AAACCATCCACTTAAACTT TTGAT AAGTT-AGGTGGATGGTTA TTTATTGCGTTGTTC TERM 147 113171 - 113136 - T 93 -8.5 -5.08367 | gap 1, opp_overlap 113133 113136 AATATAAATGAAAAA CCATCCACTTAAACTT TTGAT AAGTT-AGGTGGATGG TTATTTATTGCGTTG TERM 148 113136 - 113171 + T 100 -10.7 -4.2416 | gap 1, opp_overlap 113136, overlap 113133 AATATAAATGAAAAA CCATCCACTTAAACTT TTGAT AAGTT-AGGTGGATGG TTATTTATTGCGTTG TERM 149 113424 - 113400 - T 90 -6.5 -5.63517 | opp_overlap 113400 TTGCTAAACAAAAAA GCCAATCCA TTGATGT TGGATTGAC CTTGTATATGCCTCT SA0100 115153 - 113486 - | hypothetical protein TERM 150 114020 - 114040 + g 89 -6.9 -5.38321 | overlap 114016 AACAGCTTGGTGCTT TTGTTCAAG CTT CTTGATCAA TTTTTTATCGTCTTT SA0101 115415 - 115245 - | hypothetical protein SA0102 117247 - 115472 - | hypothetical protein SA0103 118293 - 117421 - | hypothetical protein TERM 151 119210 - 119197 - g 76 -2.5 -5.50723 | TGAGCAAAAGAAAAA TATAA TTAC TTATA GCGAAAGACATAATA TERM 152 119230 - 119258 + G 75 -4.7 -4.87803 | opp_overlap 119245, overlap 119240 AAGACATAATATTCC TATCATTGAAGAT GAT ATCTTTAGAGATA TTTTCTTTAGCGATC SA0104 118475 - 119803 + | hypothetical protein SA0105 119993 - 120466 + | hypothetical protein TERM 153 120462 - 120450 - f 74 -6.3 -4.49337 | CTACAATTCACAAAA TGAGA GAT TCTCA ATAAAAATATAAACT TERM 154 121068 - 121087 + G 70 -3.6 -4.86731 | opp_overlap 121068 CAGAGGACCAAAGAA TCCAACTA TTAT TAATTGGA TTTTGTTTCAACGCA lctP 120728 - 122320 + | hypothetical protein TERM 155 122334 - 122355 + T 70 -5.9 -4.26019 | AAATATAAATAATGT TGTCACTTG GATT CAAATGACA TTTTAAATCTAATTA TERM 156 122420 - 122379 - T 81 -10.4 -3.20435 | gap 1, opp_overlap 122379, overlap 122384 CTAATTATTCATGAA TCGAACTAGTACGAAATGC AATGA GCATCTTGT-CTAGTTCGA TTTTTTAATGTCTAA TERM 157 122379 - 122420 + T 100 -10.4 -5.24989 | gap 1, opp_overlap 122379 122384 CTAATTATTCATGAA TCGAACTAGTACGAAATGC AATGA GCATCTTGT-CTAGTTCGA TTTTTTAATGTCTAA TERM 158 122545 - 122514 - T 100 -12.5 -5.85244 | gap 1, opp_overlap 122514 AAGTAAAATAAAAAA TGCACTGAGCAACA AAAGA TGTTGCTC-GTGCA TTTAGATGATTCTTA TERM 159 122514 - 122545 + T 100 -12.5 -3.74056 | gap 1, opp_overlap 122514 AAGTAAAATAAAAAA TGCACTGAGCAACA AAAGA TGTTGCTC-GTGCA TTTAGATGATTCTTA spa 124001 - 122649 - | immunoglobulin G binding protein A precursor TERM 160 123221 - 123238 + g 80 -7.1 -4.50627 | GAGCATCGTTTAGCT TTTTAGC TTCT GCTAAAA TTTCTTTGCTCACTG TERM 161 124410 - 124378 - R 93 -8.5 -5.06052 | TTAAAAAATAGAAAA CACAAGTGCACTTTA GAA TACAGCACACTTGCG TAATAGAGATATTAT sarH1 125174 - 124422 - | hypothetical protein TERM 162 125520 - 125472 - R 76 -2.6 -5.65177 | gap 2, opp_overlap 125470 125482 ATATGTATAAAAAAA CCTCGCAACTGTTAGTTAACTGAA TCA TTTAGCTAACTT-C-GTTGTGAGG TCATTTTGTTTTAAT sirC 126460 - 125543 - | lipoprotein sirB 127533 - 126538 - | lipoprotein TERM 163 127448 - 127417 - G 95 -13.1 -3.71321 | opp_overlap 127415 127417, overlap 127408 ATCAAAGTTGAATAA CGCCTGTATCACC GTACCT GGTGACACAAGCG TATTTCCAATCATTA TERM 164 127417 - 127448 + g 79 -9.4 -3.39732 | opp_overlap 127417 127408, overlap 127415 ATCAAAGTTGAATAA CGCCTGTATCACCG TACC TGGTGACACAAGCG TATTTCCAATCATTA sirA 128541 - 127549 - | lipoprotein TERM 165 128699 - 128721 + H 73 -8.6 -3.05384 | opp_overlap 128698 TATAATCCTAATTAC TTGATAGTGA GAA TCATTATCAA TTAGGTAACACACAA SA0112 128772 - 129752 + | hypothetical protein SA0113 129749 - 130759 + | hypothetical protein SA0114 130780 - 132534 + | hypothetical protein SA0115 132527 - 133783 + | hypothetical protein SA0116 133773 - 135509 + | hypothetical protein TERM 166 136879 - 136865 - gf 73 -8.6 -3.09635 | AGCGTGAGCATTTAA GTGAAG CAG CTTCAC ACCTGACATTAAAGC SA0117 135490 - 137268 + | hypothetical protein SA0118 137240 - 138019 + | hypothetical protein SA0119 138019 - 139221 + | hypothetical protein SA0120 139225 - 139989 + | hypothetical protein TERM 167 140063 - 140102 + F 100 -10.4 -5.28983 | gap 1 TAAAACAATATAGTG TGGAGAACTTTTGATATTT TAT AAATATTGAA-GTTCTCCA TTTTTGTATTTTGCA TERM 168 140579 - 140557 - g 82 -3.4 -5.64274 | overlap 140558 TTAGGTAGAAAAAAA TTAGTAGCTG CAG CAGATACTAC CACTATTCAAAAAAG TERM 169 140578 - 140558 - g 73 -6.9 -3.9748 | overlap 140557 TAGGTAGAAAAAAAT TAGTAGCTG CAG CAGATACTA CCACTATTCAAAAAA SA0121 140185 - 140811 + | hypothetical protein TERM 170 141260 - 141242 - g 70 -8.2 -3.17319 | opp_overlap 141250, overlap 141240 141246 TTTAACGCAGTAAGA CAAACTGC CGC GCAATTTG GCGATTTCCATGTCA butA 141023 - 141799 + | acetoin reductase TERM 171 141860 - 141825 - T 76 -6.3 -4.57482 | opp_overlap 141825 TTAGCGATAAATAAA TCCTTATTGTTAAGT TTAATC ACTTAGCAGTAAGGA TTTTTTAGTGCACTT TERM 172 141825 - 141860 + T 100 -10.7 -5.16237 | opp_overlap 141825 TTAGCGATAAATAAA TCCTTATTGTTAAGT TTAATC ACTTAGCAGTAAGGA TTTTTTAGTGCACTT SAS004 142000 - 141848 - | hypothetical protein SA0123 142144 - 143115 + | hypothetical protein SA0124 143078 - 143770 + | hypothetical protein SA0125 143980 - 145146 + | hypothetical protein SA0126 145127 - 146365 + | hypothetical protein SA0127 146355 - 147785 + | hypothetical protein sodM 148053 - 148652 + | superoxide dismutase TERM 173 148673 - 148697 + F 95 -7.9 -5.38249 | CTTAATATAATTGAG GTGGAGCATTT ACA AGGTGTTCCAC TTTTTTGTACTTAAT TERM 174 149650 - 149628 - g 82 -3.4 -5.59655 | overlap 149629 CAAAGTAACAAAAAA GTTTTACCAG CTG CTGGTGAAAG TATGACATCAAGTAT TERM 175 149649 - 149629 - g 73 -6.9 -3.93353 | overlap 149628 AAAGTAACAAAAAAG TTTTACCAG CTG CTGGTGAAA GTATGACATCAAGTA SA0129 149019 - 149744 + | hypothetical protein TERM 176 149783 - 149827 + T 100 -16.7 -3.66784 | gap 1, overlap 149784 149787 AAATCGTGTGATTAT C-TGAGCGAGCCTAGGACAT AAATCA ATGTCCTAGGCTCGCTAATG TTATATTGGCAGTAG TERM 177 149784 - 149825 + T 100 -20.4 -3.41292 | overlap 149783 149787 AATCGTGTGATTATC TGAGCGAGCCTAGGACAT AAATCA ATGTCCTAGGCTCGCTAA TGTTATATTGGCAGT TERM 178 149787 - 149822 + T 100 -22.1 -2.85947 | overlap 149784 149783 CGTGTGATTATCTGA GCGAGCCTAGGACAT AAATCA ATGTCCTAGGCTCGC TAATGTTATATTGGC TERM 179 149861 - 149873 + T 82 -7.7 -4.42851 | ACTGAATGAAATTGC GCTTG TAA CAAGC TTTTCCATTTCTTAC SA0130 150675 - 149935 - | hypothetical protein pnp 150926 - 151633 + | purine nucleoside phosphorylase SA0132 151640 - 152992 + | hypothetical protein dra 153073 - 153735 + | deoxyribose-phosphate aldolase drm 153763 - 154941 + | phosphopentomutase TERM 180 155006 - 154965 - T 100 -16.1 -4.96762 | opp_overlap 154965 TAGATATTATAAAAA CAGCAGTGAAGTTAACTAT AACA ATAGTTTTCTTCACTGCTG TTTTTATTATAATAG TERM 181 154965 - 155006 + T 100 -16.1 -5.22006 | opp_overlap 154965 TAGATATTATAAAAA CAGCAGTGAAGTTAACTAT AACA ATAGTTTTCTTCACTGCTG TTTTTATTATAATAG SA0135 155885 - 155070 - | hypothetical protein SA0136 156682 - 155882 - | hypothetical protein TERM 182 156612 - 156659 + g 79 -8 -4.0056 | opp_overlap 156612 156618 156634, overlap 156657 ATGATTAACATGAAG GTAAAACTCGTTTTTAAAGAAA CCTT TTTCTTTAAAAGGGAGTCATAC TTTGTAGGTATTTCT TERM 183 156653 - 156618 - G 81 -7.8 -4.31688 | opp_overlap 156612, overlap 156612 156634 AACATGAAGGTAAAA CTCGTTTTTAAAGAAA CCTT TTTCTTTAAAAGGGAG TCATACTTTGTAGGT SA0137 157457 - 156684 - | hypothetical protein SA0138 158608 - 157652 - | hypothetical protein SA0139 158837 - 160381 + | hypothetical protein TERM 184 160593 - 160617 + G 76 -6.5 -4.58213 | TTTTAAAATAGATAA TGGTGATTTTT TGC AAGGGTCACCA TTTTGTAATTACTTA SA0140 160432 - 161967 + | hypothetical protein TERM 185 161983 - 162006 + F 95 -6.8 -5.77734 | opp_overlap 161983 CGGATATATGAAAAA CTTACTTGAT TTTA ATCGGGTAAG TTTTTGTTTTTGTTT SA0141 162124 - 162891 + | hypothetical protein SA0142 162897 - 164072 + | hypothetical protein TERM 186 164122 - 164090 - f 100 -12.1 -4.29325 | opp_overlap 164090 CACCAATATTTAAAA CTCGAGCTGAAAAGA TCA TCATTTCAGTTCGAG TTTTTTTGTGTAACA TERM 187 164090 - 164122 + F 100 -14.3 -5.71712 | opp_overlap 164090 CACCAATATTTAAAA CTCGAGCTGAAAAGA TCA TCATTTCAGTTCGAG TTTTTTTGTGTAACA TERM 188 165381 - 165367 - g 76 -2.8 -5.5604 | opp_overlap 165367 TGAATGAACAAAAAA CAGG TATTAAG CCTG ATATTGTCGGTAAAT adhE 164457 - 167066 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 189 167134 - 167160 + F 83 -6.6 -5.09762 | CCACATAAACTTTAA GTCGATAATCAT TTT ACGGTTATCGGC TTTTATTTATTGCCA TERM 190 167823 - 167806 - g 76 -4.1 -5.04987 | opp_overlap 167795, overlap 167795 167808 AAGATTCGGAAAAAA TTGCGAA TAGC TTCGCTA AAGTTACAAGTAAAC capA 167409 - 168077 + | capsular polysaccharide synthesis enzyme Cap5A capB 168093 - 168779 + | capsular polysaccharide synthesis enzyme Cap5B capC 168782 - 169546 + | capsular polysaccharide synthesis enzyme Cap8C TERM 191 171234 - 171222 - g 71 -6.3 -4.25056 | overlap 171227 GAGCTTATGAATAAA GATGA GGT TCATC CTGAACAAGTATTTG capD 169566 - 171389 + | capsular polysaccharide synthesis enzyme Cap5D capE 171379 - 172407 + | capsular polysaccharide synthesis enzyme Cap8E capF 172420 - 173529 + | capsular polysaccharide synthesis enzyme Cap5F capG 173533 - 174657 + | capsular polysaccharide synthesis enzyme Cap5G TERM 192 175213 - 175203 - g 70 -4 -4.85195 | AAAACAATTGAAAAA CTTT TGG AAAG CAAGTGGTGGGAGAA capH 174660 - 175286 + | capsular polysaccharide synthesis enzyme O-acetyl transferase Cap5H capI 175291 - 176400 + | capsular polysaccharide synthesis enzyme Cap5I capJ 176414 - 177580 + | capsular polysaccharide synthesis enzyme Cap5J TERM 193 178054 - 178071 + G 75 -4.9 -4.87892 | opp_overlap 178057 TATTTCTATATTATT TAATCCA AAAC TGGATTG TTTGTTTTATTACCA capK 177573 - 178778 + | capsular polysaccharide synthesis enzyme Cap5K capL 178779 - 179984 + | capsular polysaccharide synthesis enzyme Cap5L capM 179995 - 180552 + | capsular polysaccharide synthesis enzyme Cap5M TERM 194 180951 - 180941 - g 71 -5.4 -4.59773 | TGGTATTTCCAAAAA GTTC GCT GAAC AAGCATTACAAGAGT capN 180552 - 181439 + | capsular polysaccharide synthesis enzyme Cap5N capO 181493 - 182755 + | capsular polysaccharide synthesis enzyme Cap8O capP 182802 - 183977 + | capsular polysaccharide synthesis enzyme Cap5P SA0160 184368 - 184042 - | heme-degrading monooxygenase IsdI SA0161 184758 - 184375 - | hypothetical protein aldA 185185 - 186672 + | hypothetical protein TERM 195 186812 - 186853 + F 100 -9.7 -4.94972 | opp_overlap 186812 186814, overlap 186814 TAATGACTAAAATAA TAGCAGTAGGATGGTTT TTAATTGC AAATCATCTTACTGCTG TTTTTAATTATGCTA TERM 196 186814 - 186851 + F 91 -10.1 -4.08682 | opp_overlap 186814 186812, overlap 186812 ATGACTAAAATAATA GCAGTAGGATGGTTT TTAATTGC AAATCATCTTACTGC TGTTTTTAATTATGC SA0163 187319 - 188278 + | hypothetical protein TERM 197 188364 - 188376 + T 90 -7.7 -5.1925 | opp_overlap 188363 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SAS005 188543 - 188388 - | hypothetical protein TERM 198 188463 - 188444 - G 77 -9.3 -3.20164 | CTACAGGCAATGCAA GTTGGGG TGTGGG CCCCAAC AAAGAGAAATTGGAT TERM 199 188490 - 188467 - G 71 -6.8 -4.15044 | opp_overlap 188473, overlap 188469 188473 GTGGGCCCCAACAAA GAGAAATTGG ATTC CCAATTTCTA CAGACAATGCAAGTT TERM 200 188488 - 188469 - G 80 -9.4 -3.6761 | opp_overlap 188473, overlap 188467 188473 GGGCCCCAACAAAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG SA0164 188776 - 188573 - | hypothetical protein SA0165 188955 - 189467 + | hypothetical protein TERM 201 189733 - 189753 + F 86 -9.7 -3.71645 | opp_overlap 189733 CAATTCACGATATAA GGGCTGTGT TTG GCATAGCCC TTTAGATATACACTT SA0166 189809 - 190549 + | hypothetical protein SA0167 190563 - 191534 + | hypothetical protein SA0168 191531 - 192292 + | hypothetical protein TERM 202 192470 - 192487 + G 77 -4.9 -5.02323 | GAAGCTGTATCGCAG TCTTGTT TGAC AACAGGA TTTTGTTTATGGTGC SA0169 192305 - 193336 + | hypothetical protein SA0170 193562 - 193912 + | hypothetical protein fdh 193987 - 195111 + | formate dehydrogenase TERM 203 195173 - 195199 + F 93 -5.9 -5.71983 | overlap 195162 TGAATCATATAAGCA CTACTGCTGTT GTAAA GATGGCAGTAG TTTTTTTATGATTAC SA0172 195497 - 196747 + | hypothetical protein TERM 204 198079 - 198091 + G 71 -7.7 -3.6502 | TCGCAATTACAGTGC GCGAA GTC TTCGC TTTCACTAGAGACTA TERM 205 202077 - 202091 + G 70 -7.2 -3.84027 | opp_overlap 202075, overlap 202075 CGACAATGAAGTATT TTTGCA ACA TGCAAA TATTGTTTTTGATGC SA0173 197194 - 204369 + | hypothetical protein SA0174 204382 - 205026 + | hypothetical protein TERM 206 205338 - 205288 - T 81 -7.2 -4.67982 | gap 1 TGTCAGTTAATAAAA TAACGTGAGCATCA-ATCATCAT ACTCAA ACGATGATTTAAAACTCACGTTA ATGTTAGTCAGTGTA SA0175 205848 - 205354 - | hypothetical protein SA0176 206867 - 206103 - | hypothetical protein argJ 208124 - 206883 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein argC 209167 - 208136 - | N-acetyl-gamma-glutamyl-phosphate reductase SA0179 210390 - 209206 - | ornithine aminotransferase TERM 207 210103 - 210128 + g 76 -2.7 -5.4756 | gap 1 GTTAAGGGAGAGTAC TTTGTCTTTCTT AGC AAGAT-GACAAA TTTTTTCTTCCCATT TERM 208 210637 - 210603 - R 100 -15.2 -5.52023 | opp_overlap 210600 210598 210603 210635 AGTATGAATAAAAAA TGCCACAAGCATATGT TTA ACATATGACTGTGGCA TAGTATTATGCTTAT TERM 209 210603 - 210637 + r 100 -13 -2.83732 | opp_overlap 210603, overlap 210600 210598 210635 AGTATGAATAAAAAA TGCCACAAGCATATGT TTA ACATATGACTGTGGCA TAGTATTATGCTTAT SA0180 211998 - 210649 - | hypothetical protein TERM 210 212269 - 212237 - R 83 -7.7 -4.65263 | opp_overlap 212233 212237 212238, overlap 212239 ACTTTGTAAAATAAA GATACCCCCTTCAAC ATG ATCGAAGGGGGTAAG TGTATGTTTAGTTCA TERM 211 212267 - 212239 - R 100 -14.7 -3.93868 | opp_overlap 212238 212237 212233, overlap 212237 TTTGTAAAATAAAGA TACCCCCTTCAAC ATG ATCGAAGGGGGTA AGTGTATGTTTAGTT SA0181 212774 - 212277 - | hypothetical protein SA0182 214541 - 212901 - | hypothetical protein TERM 212 214767 - 214800 + r 82 -8.9 -3.96892 | gap 1, opp_overlap 214767, overlap 214799 ATAGCAAAGAAAAAA CAGGCGCGT-CACCTT ATG AAGGTATACGCACCTG TTTATAGTAAGCATT TERM 213 214800 - 214767 - R 100 -13.3 -5.69793 | gap 1, opp_overlap 214767 214799 ATAGCAAAGAAAAAA CAGGCGCGT-CACCTT ATG AAGGTATACGCACCTG TTTATAGTAAGCATT glcA 216859 - 214814 - | hypothetical protein TERM 214 215160 - 215146 - G 73 -8.6 -3.15579 | opp_overlap 215136 215146 215151 TGAATGGTGCACGAA CTTCAC CTT GTGAAG GTTTAATAGCGATAC TERM 215 216962 - 216908 - H 81 -4.5 -5.49234 | gap 2, opp_overlap 216919 216920 216923 216924, overlap 216920 216924 AGATTCAATAAAAAA GACACGAG-CAAA-TAGACTGTGTTGG TAA CCATCACAGCTTAATTTAACTCATGCC TAATCTTACTTAGTA TERM 216 216924 - 216944 + H 76 -9.7 -2.72591 | opp_overlap 216920 216908 216924, overlap 216923 216920 216919 ACACGAGCAAATAGA CTGTGTTGG TAA CCATCACAG CTTAATTTAACTCAT TERM 217 216944 - 216924 - H 80 -9.7 -3.31564 | opp_overlap 216924 216923 216920 216919, overlap 216920 216908 ACACGAGCAAATAGA CTGTGTTGG TAA CCATCACAG CTTAATTTAACTCAT SA0184 217444 - 218499 + | hypothetical protein murQ 218496 - 219395 + | N-acetylmuramic acid-6-phosphate etherase TERM 218 219494 - 219474 - g 77 -9.8 -3.13191 | overlap 219472 TGGATAATATAGATA GTGTCATG AACTG CATGACAC GTGTGCGTATTAAAG SA0186 219407 - 220861 + | hypothetical protein SA0187 220864 - 221739 + | hypothetical protein TERM 219 221914 - 221891 - T 81 -8.2 -4.13995 | opp_overlap 221891 GCGTGACAAATTAAA GCAAAGTTCA GGTT TGAGCTTTGC TTTTTTCATAGATGG TERM 220 221891 - 221914 + T 100 -10.4 -5.1675 | opp_overlap 221891 GCGTGACAAATTAAA GCAAAGTTCA GGTT TGAGCTTTGC TTTTTTCATAGATGG SA0188 222214 - 221933 - | hypothetical protein TERM 221 223784 - 223774 - g 77 -5.4 -4.86385 | overlap 223760 ACTTTTAAAAATAAA GCTT TAA AAGC AGAAGATAACAGCAT TERM 222 223993 - 223983 - g 79 -5.4 -5.10461 | GCGACTTAACAAAAA GTTG GAA CAAC CGTTAACGATAGCTG TERM 223 224110 - 224120 + G 71 -5.4 -4.56597 | opp_overlap 224110 GATTATAATAAAAAG TTCG AGA CGAA TTTTTCAACAGACAC hsdR 222427 - 225216 + | type I restriction enzyme restriction chain TERM 224 225223 - 225252 + T 88 -9.3 -4.15884 | gap 1, overlap 225224 GGTGTGTAATGATTC AGCCCCCT-CGCTA GAT TAGTGTAGGGGGCA TTATTATTTCATTAG TERM 225 225224 - 225251 + T 100 -12.8 -3.08446 | gap 1, overlap 225223 GTGTGTAATGATTCA GCCCCCT-CGCTA GAT TAGTGTAGGGGGC ATTATTATTTCATTA SA0190 225962 - 225363 - | hypothetical protein SA0191 226088 - 227200 + | hypothetical protein SA0192 227197 - 227877 + | hypothetical protein SA0193 227874 - 229052 + | hypothetical protein SA0194 229259 - 229480 + | hypothetical protein TERM 226 229530 - 229505 - f 78 -9.1 -3.224 | opp_overlap 229505, overlap 229503 229493 229488 229527 TAATTCTTTATAAGA GAGGCTTTC TTTTTTGG GAAAGCCTC TTTTTAAAAAAGGAG TERM 227 229505 - 229530 + F 100 -10.5 -4.56597 | opp_overlap 229505 229503 229493 229488 229527 TAATTCTTTATAAGA GAGGCTTTCTT TTTT GGGAAAGCCTC TTTTTAAAAAAGGAG SA0195 229518 - 231236 + | hypothetical protein SA0196 231295 - 231738 + | hypothetical protein TERM 228 232157 - 232180 + G 70 -8.3 -3.29142 | opp_overlap 232160, overlap 232160 TTTTTCAAGTGGTAT GAAGCAAAA ACTAAA TTTTGCTTC TATGTTATTAGTAGA TERM 229 232427 - 232411 - g 73 -7.3 -3.93556 | opp_overlap 232411, overlap 232406 AGTCATTTAATCAAA CCACGTT AGA AACATGG TTGTTAGAAAGTCAA SA0197 231750 - 232472 + | hypothetical protein TERM 230 232559 - 232576 + G 72 -4.9 -4.80487 | AATTTTTTACATATG TAGTTGG TTTC CCAATTA TTTATTTTGGTTATA SAS006 232459 - 232635 + | hypothetical protein TERM 231 233152 - 233118 - T 100 -9.4 -4.56159 | gap 1, opp_overlap 233121, overlap 233121 CTAATAAAATATAAA TAATCCCCCG-CACT TCACAT AGTGGCGGGGGATTT ATTCTGGCGTCAAAA TERM 232 233149 - 233121 - T 100 -11.1 -4.34119 | gap 1, opp_overlap 233121, overlap 233118 ATAAAATATAAATAA TCCCCCG-CACT TCACAT AGTGGCGGGGGA TTTATTCTGGCGTCA TERM 233 233121 - 233149 + T 100 -11.1 -4.32177 | gap 1, opp_overlap 233118 233121 ATAAAATATAAATAA TCCCCCG-CACT TCACAT AGTGGCGGGGGA TTTATTCTGGCGTCA oppF 234937 - 233345 - | oligopeptide transport ATP-binding protein TERM 234 234834 - 234860 + g 84 -6.7 -5.055 | opp_overlap 234834 ACAATACCTAGGATA TGTTTTTTTCG TAATT CGAAAGAGACA TTTTTTACCGCTTGA oppB 235035 - 236372 + | hypothetical protein SA0200 236378 - 237541 + | hypothetical protein TERM 235 239224 - 239240 + G 73 -8.1 -3.6715 | opp_overlap 239223 239218 ATCAATTTATTAAGT TTTATCG TGG CGATAAA TTTAAAATTGCATCA rlp 237558 - 239333 + | RGD-containing lipoprotein TERM 236 240242 - 240266 + G 71 -7.9 -3.64599 | GATCTGTCGATTACT TGCATCATTTG ATA CAAGCGATGCA TTTAGCATATAGTGA SA0202 239371 - 241377 + | hypothetical protein SA0203 242463 - 241690 - | hypothetical protein TERM 237 242327 - 242337 + g 77 -5.4 -5.0133 | TTTTTAATAGGATAC GTAC TTA GTAC TTTTTTAAGACCATC TERM 238 242638 - 242613 - R 78 -3.3 -5.62045 | AGATACAATAAAAAA CTGCATGAC GTTGAGGA GTCACACAG TGTAATTAAAAATTT acpD 243278 - 242652 - | azoreductase TERM 239 243587 - 243577 - g 74 -5.4 -4.7173 | opp_overlap 243567, overlap 243567 GATGACATTCAAAAA TGGT TTA ACCA ATATACCGATAAATT SA0205 243487 - 244065 + | hypothetical protein TERM 240 244141 - 244095 - f 70 -3.8 -5.0538 | opp_overlap 244099, overlap 244099 CCGCAGTCTAAAAAA TTAAGCAATCATTGTGTGAGTA TGA TACTTACATAATGGTTGCTTTT TTCAATGAAAATCGT TERM 241 244099 - 244137 + F 100 -15.6 -5.08824 | opp_overlap 244095 244099 AGTCTAAAAAATTAA GCAATCATTGTGTGAGTA TGA TACTTACATAATGGTTGC TTTTTTCAATGAAAA TERM 242 244137 - 244099 - f 82 -9 -3.93769 | opp_overlap 244099, overlap 244095 AGTCTAAAAAATTAA GCAATCATTGTGTGAGTA TGA TACTTACATAATGGTTGC TTTTTTCAATGAAAA msmX 244449 - 245546 + | multiple sugar-binding transport ATP-binding protein SA0207 245559 - 246830 + | hypothetical protein SA0208 246833 - 248101 + | hypothetical protein SA0209 248103 - 248942 + | hypothetical protein SA0210 249013 - 250092 + | hypothetical protein SA0211 250117 - 251157 + | hypothetical protein TERM 243 251995 - 252011 + G 73 -9.5 -2.87683 | opp_overlap 252005, overlap 251997 TTCCGTACAGTTGGT TATGGAC ATA GTCCATA TGTATGGGCAGATAT SA0212 251212 - 252180 + | hypothetical protein TERM 244 252401 - 252360 - T 78 -10.4 -2.86338 | gap 1, opp_overlap 252360, overlap 252359 ATTCACAGTAACAAT CCTCACCATTGAAAAGAGT ATATA AC-CTTTTCGATAGTGAGG TATATGATAATAAAA TERM 245 252360 - 252401 + T 79 -10.4 -2.96216 | gap 1, opp_overlap 252360 252359 ATTCACAGTAACAAT CCTCACCATTGAAAAGAGT ATATA AC-CTTTTCGATAGTGAGG TATATGATAATAAAA SA0213 253035 - 252541 - | hypothetical protein uhpT 253268 - 254647 + | sugar phosphate antiporter TERM 246 254841 - 254888 + T 100 -10.1 -4.49132 | opp_overlap 254840 254843 GTGACTCAATGAATT TACTCCTTACAATAAAGACAT ATAGCG GTGTCAATATTGTAGGGAGTA TTGTTTTATATTTAA TERM 247 254955 - 254916 - T 100 -18.8 -4.60924 | opp_overlap 254916 TAAACTCTCTAAAAA GCGGACTGAAAGAAAAGT GAAA ACTTCTCTATCAGTCCGC TTTTTCATAGAACAA TERM 248 254916 - 254955 + T 100 -16.6 -4.72272 | opp_overlap 254916 TAAACTCTCTAAAAA GCGGACTGAAAGAAAAGT GAAA ACTTCTCTATCAGTCCGC TTTTTCATAGAACAA SA0215 255764 - 255006 - | hypothetical protein SA0216 257313 - 255757 - | hypothetical protein SA0217 258278 - 257310 - | hypothetical protein TERM 249 258393 - 258410 + H 72 -2.7 -5.38054 | opp_overlap 258393 258406, overlap 258395 258406 TTAAGACGTTGCAAA TGTTGTG ATAG CACAAAA TTTTTGTTTGTCAAG TERM 250 259613 - 259603 - g 71 -5.4 -4.46212 | CCGTCCAGCAGAAAA CTTC AAA GAAG CAGTTCAATGGTTAT TERM 251 260711 - 260697 - g 80 -6.4 -4.66987 | TATACGGTAAGAAAA CTGGTA ACA CACCAG ACGGACGTAAAGCTG pflB 258866 - 261115 + | formate acetyltransferase TERM 252 261864 - 261887 + G 72 -8.2 -3.36803 | opp_overlap 261870 TACCGTTATGTTAAC TTCAAAGGGA AAAT TCCCGTTGAA TTATAAATACAATTC pflA 261138 - 261893 + | formate acetyltransferase activating enzyme TERM 253 261914 - 261953 + F 100 -9.4 -4.75174 | opp_overlap 261917, overlap 261917 ATTCAGACCGAAAAG AAAGCATATGCAACTTCA AGAG TGAAGGGGCATATGCTTC TTTTTCAATTGAGTA TERM 254 261917 - 261950 + F 100 -11.1 -4.47888 | opp_overlap 261917, overlap 261914 CAGACCGAAAAGAAA GCATATGCAACTTCA AGAG TGAAGGGGCATATGC TTCTTTTTCAATTGA TERM 255 261950 - 261917 - f 100 -11.1 -4.70515 | opp_overlap 261914 261917 CAGACCGAAAAGAAA GCATATGCAACTTCA AGAG TGAAGGGGCATATGC TTCTTTTTCAATTGA TERM 256 263749 - 263764 + G 76 -4 -5.29445 | AAACATCATTAGATT TCTTTG TCAT CGAAGA TTTTTCTTATTCGCC SA0220 262215 - 263978 + | hypothetical protein TERM 257 263954 - 263964 + T 70 -4 -4.9138 | AACATACTTCGATCG TTCT ATA AGAA TTTTGTTTGAATAAT TERM 258 263989 - 264025 + T 100 -13.9 -4.87626 | opp_overlap 263989 AATAATATAAACAAA GACCTCTAAAGTTATCA AGA TGATACCTTCAGAGGTC TTTTTAATGTTGCCA TERM 259 264025 - 263989 - T 100 -16.1 -4.72277 | opp_overlap 263989 AATAATATAAACAAA GACCTCTAAAGTTATCA AGA TGATACCTTCAGAGGTC TTTTTAATGTTGCCA SA0221 264486 - 264142 - | hypothetical protein coa 264676 - 266652 + | staphylocoagulase precursor SA0223 268423 - 267239 - | hypothetical protein SA0224 270714 - 268453 - | hypothetical protein TERM 260 268849 - 268861 + g 73 -7.7 -3.88583 | ATAACCATAACGACG TGCCT CAA AGGCA TTTGTAGAGACTTTC TERM 261 270008 - 269996 - G 81 -9.1 -3.76641 | ACTGCAATATCTAAA CCGAC TAG GTCGG ATAGGGCATATGTAC SA0225 272111 - 270900 - | hypothetical protein SA0226 273728 - 272223 - | hypothetical protein SA0227 275316 - 273754 - | hypothetical protein TERM 262 274644 - 274671 + g 79 -8.6 -3.80893 | TAACAACTTCATTCG GTTTTAGTTGAT AGTC GTCAACTAAAGC TTTAACTTGTACAAT SA0228 275772 - 276914 + | hypothetical protein TERM 263 277143 - 277177 + T 85 -7.1 -4.98255 | opp_overlap 277143 TATAAGCAAATTAAA CCACGCCATAATCAT ATTGG ATGACTTCGGCGTGG TTTTTATAGTTGAAG TERM 264 277177 - 277143 - T 100 -11.5 -4.16205 | opp_overlap 277143 TATAAGCAAATTAAA CCACGCCATAATCAT ATTGG ATGACTTCGGCGTGG TTTTTATAGTTGAAG SA0229 278703 - 277228 - | hypothetical protein TERM 265 277441 - 277482 + g 74 -2.3 -5.42131 | overlap 277444 ATTAATTAAATCATC GACGTTGCTATTATTGTAG TCTC CTTTATTAATAGCACCATC TTTTTTATATGCTTG TERM 266 278918 - 278933 + r 72 -7.6 -3.59031 | opp_overlap 278916 278917 AAGTATTGAGCAACT GCTGTA GTAC TACAGC TTGGTTATGTTTAGT SA0230 279257 - 278901 - | hypothetical protein TERM 267 279372 - 279399 + r 71 -5.6 -4.36262 | opp_overlap 279372 CTCCCAATTAAAAAA CAGCCATGAC AAAGTAAA GTCATAGCTG TTTTGGTATAGATGT TERM 268 279399 - 279372 - R 90 -7.8 -5.26875 | opp_overlap 279372 CTCCCAATTAAAAAA CAGCCATGAC AAAGTAAA GTCATAGCTG TTTTGGTATAGATGT SAS007 279587 - 279414 - | hypothetical protein SA0231 280758 - 279613 - | hypothetical protein TERM 269 281120 - 281105 - H 71 -3.3 -5.24291 | opp_overlap 281105, overlap 281100 AAAATTAAAATAAAA TGTGA AATAAA TCACA ATTTAATATTGACCC TERM 270 281981 - 281962 - g 75 -8 -3.71917 | AGGGCAAAGCGCAAA TTGAACAA ATTT TTGTTCAA ACACGTGATGCAGCA lctE 281331 - 282284 + | L-lactate dehydrogenase TERM 271 282344 - 282383 + T 91 -8.7 -4.82667 | opp_overlap 282346, overlap 282346 CCAAAAAATTGTATA AAGGGCTATTTGATACA ACTATA TGTGTCGAGTAGCCCTA TTTTTAATGTAGTGA TERM 272 282346 - 282381 + T 100 -11.3 -4.02905 | opp_overlap 282346, overlap 282344 AAAAAATTGTATAAA GGGCTATTTGATACA ACTATA TGTGTCGAGTAGCCC TATTTTTAATGTAGT TERM 273 282574 - 282540 - T 79 -5.2 -5.32396 | gap 1 ACATTAAAAATAAAA GCAACGATGTCAC TTCTTACTTC GT-ACATCGTTGC CATTAGTTCTGTTGA SA0233 284133 - 282604 - | hypothetical protein TERM 274 283505 - 283493 - G 77 -5.5 -5.01553 | opp_overlap 283493 AAGCCATAAACAAAA GTACC GAT GGCAC CTGTTTTCGTTACAA TERM 275 283650 - 283662 + g 78 -7.7 -4.12941 | opp_overlap 283649 283659, overlap 283657 AGAAACCTAAATACG GTGGT AAT ACCAC TTTGTGATATTTGTT SA0234 284495 - 285430 + | hypothetical protein TERM 276 285459 - 285490 + F 100 -10.2 -4.92783 | gap 1, opp_overlap 285459 AATAGATACAGTTAA CCCTAAGG-CGCCTG ATA TAAGCGTCCTTAGGG TTTTTATAGTGGATT TERM 277 285490 - 285459 - f 93 -11.7 -3.18913 | gap 1, opp_overlap 285459 AATAGATACAGTTAA CCCTAAGG-CGCCT GATAT AAGCGTCCTTAGGG TTTTTATAGTGGATT TERM 278 285673 - 285661 - f 70 -6.3 -4.10453 | overlap 285644 GAAATGTTGTTAAAA CATCA CAA TGATG TACATGCTCATTTTG TERM 279 286816 - 286804 - g 74 -6.3 -4.34737 | opp_overlap 286803, overlap 286800 TGATGAATTAATAAA TCCTT TAC AAGGA AATTATCAATCCTTA SA0235 285767 - 287863 + | hypothetical protein SA0236 287848 - 288315 + | hypothetical protein SA0237 288338 - 288616 + | hypothetical protein TERM 280 288672 - 288654 - f 84 -9 -4.28067 | overlap 288646 TCAATAACATATAAA TATATGCA AAT TGCATATA AATGACTATCACGAC gatC 288843 - 290102 + | PTS galactitol-specific enzyme IIC component SA0239 290120 - 291175 + | sorbitol dehydrogenase SAS008 291177 - 291323 + | hypothetical protein SA0240 291347 - 292390 + | hypothetical protein TERM 281 292807 - 292788 - f 81 -5.8 -5.252 | opp_overlap 292788 CATTTTTATAAAAAA TTATCACA CTAT TGTGACAA CTATCTTTGGATTAA ispD 292918 - 293634 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SA0242 293627 - 294652 + | hypothetical protein TERM 282 294824 - 294810 - g 72 -2.8 -5.33026 | TAACCGAAACAAAAA CATTAG AAG CAAATG AAATGAAAATAGACG TERM 283 295750 - 295738 - g 83 -6.3 -4.86822 | AATTAGAGAAGAAAA TGTTG TAC CAACA GGTGTACCACGTACT SA0243 294674 - 296368 + | hypothetical protein TERM 284 296578 - 296629 + F 85 -4.9 -5.64304 | opp_overlap 296570 296566 296597 296607 296611, overlap 296570 296624 AAATAATCGATCCAA TCGTTATCTAATTCATAA-ATGTGT AAAC ACATACGTTATGAAT-GGATAACGA TTTTTTGTTATGTTA TERM 285 296798 - 296779 - f 79 -5.7 -5.02439 | ATATAATTACAAAAA CACGTCG GAGGTA CGACATG ATTAAAAATACAATT SA0244 296796 - 297965 + | hypothetical protein ispD 298241 - 298957 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SA0246 298950 - 299975 + | hypothetical protein TERM 286 300736 - 300722 - g 75 -5 -5.01546 | opp_overlap 300722 AAATTTAGATAAAAA GTATGA TAT TCACAC TGTTTTTAAAGCGAA TERM 287 301067 - 301055 - g 85 -6.3 -5.22289 | TATTAAAGAGAAAAA TGTAG TGC CTACA GGTGTTCCACGTACT TERM 288 301489 - 301501 + G 73 -4.1 -4.83615 | overlap 301499 ATTTAGAAGATTATA TTACG ACG CGTGA TTTTTATGAACCATA SA0247 299997 - 301685 + | hypothetical protein SA0248 301718 - 303439 + | hypothetical protein TERM 289 303484 - 303450 - f 76 -9.6 -2.61866 | gap 1, opp_overlap 303450, overlap 303449 303448 303444 AATAAATAATAAATG CCCTCAAATCTATGT GAACTA ACATA-ATTTGAGGG TTTTATTTTGCTATT TERM 290 303450 - 303484 + F 100 -9.6 -5.17488 | gap 1, opp_overlap 303449 303448 303444 303450 AATAAATAATAAATG CCCTCAAATCTATGT GAACTA ACATA-ATTTGAGGG TTTTATTTTGCTATT scdA 303583 - 304257 + | cell wall biosynthesis protein ScdA TERM 291 304274 - 304297 + F 72 -5.3 -4.72333 | TAACGCGATTAGAAA CTGTTGGCA AAGTAA TGTCAGCAG TTTTTCGCTATACTT lytS 304502 - 306256 + | two-component sensor histidine kinase lytR 306259 - 306999 + | two-component response regulator TERM 292 306988 - 307008 + F 100 -8.4 -5.97575 | opp_overlap 306991 TTTAAAGCGTCGATA GGATTACT TTAAC AGTAATCC TTTTTTTTATGCATT lrgA 307118 - 307555 + | murein hydrolase regulator LrgA lrgB 307548 - 308249 + | antiholin-like protein LrgB TERM 293 308308 - 308342 + T 100 -15.2 -5.1634 | opp_overlap 308308 ATTATCGTAAAAAAA CGTCTATACTCCAGTT TAT AACTGGGATATAGACG TTTTTATGTATTTAT TERM 294 308342 - 308308 - T 100 -15.2 -5.44721 | opp_overlap 308308 ATTATCGTAAAAAAA CGTCTATACTCCAGTT TAT AACTGGGATATAGACG TTTTTATGTATTTAT SA0254 309061 - 308357 - | hypothetical protein TERM 295 308784 - 308770 - G 80 -7.2 -4.57569 | opp_overlap 308770 CCATCTCCTTAAAAA CAAGTA CCT TACTTG TCATTCGATGTTCAC SA0255 309210 - 310001 + | hypothetical protein bglA 310017 - 311453 + | 6-phospho-beta-glucosidase TERM 296 311564 - 311546 - T 70 -6.1 -4.1891 | GGCCCCCAACACAAA GAATTTC GAAAA GAAATTC TACAGGTAATGCAAG SA0257 312701 - 311940 - | hypothetical protein rbsK 313866 - 312952 - | ribokinase rbsD 314298 - 313894 - | D-ribose pyranase SA0260 315194 - 314313 - | hypothetical protein TERM 297 315389 - 315363 - R 100 -10.2 -4.7871 | AATTATGATTAAAAA CCCTCAGCATTA AAG CAACGCTAAGGG CCTAACAATGATGAG SA0261 316424 - 315426 - | hypothetical protein SA0262 316804 - 317196 + | hypothetical protein TERM 298 317219 - 317252 + T 100 -9.8 -5.16151 | opp_overlap 317222 TGAATATAATTAGAG TAAGCGAAGAAC AGAGAAAAAC GTTCTTCGCTTA TTTTTCTTGAATTTC SA0263 318700 - 317324 - | hypothetical protein TERM 299 318676 - 318656 - G 73 -9.1 -2.87443 | overlap 318655 TGCAGACAACATAAT CGCAATAAT AAT ATTACTGCG TGGTGAAGATTGTGT SA0264 318934 - 319926 + | hypothetical protein lytM 320252 - 321202 + | peptidoglycan hydrolase TERM 300 321243 - 321212 - T 79 -8.2 -3.96051 | gap 1, opp_overlap 321212 AGATAATACAGTAAA TCCCAAGTTACAATA TCA TAC-GCAACTTGGGA TTTTTTCGTTTTAAT TERM 301 321212 - 321243 + T 81 -4.5 -5.48054 | opp_overlap 321212 AGATAATACAGTAAA TCCCAAGTTAC AATATCATAC GCAACTTGGGA TTTTTTCGTTTTAAT SA0266 321913 - 321254 - | hypothetical protein SA0267 322847 - 321927 - | hypothetical protein SA0268 324010 - 322844 - | hypothetical protein TERM 302 323319 - 323307 - G 72 -4.9 -4.82901 | CGCTCTTTAGAAAAA TGAAA CAT TTTCA ATCGCGCTTTCAATA TERM 303 324063 - 324030 - R 100 -13.5 -2.71364 | gap 1, opp_overlap 324030, overlap 324033 CCACTCCTCCAATGA TAAGATTGAAAGG-CA AGA TGACCTTTCAATCTTA TTTTTATATTTTAGT TERM 304 324030 - 324063 + r 100 -13.5 -5.30339 | gap 1, opp_overlap 324030 324033 CCACTCCTCCAATGA TAAGATTGAAAGG-CA AGA TGACCTTTCAATCTTA TTTTTATATTTTAGT TERM 305 324060 - 324033 - R 87 -10.8 -3.50853 | gap 1, opp_overlap 324030, overlap 324030 CTCCTCCAATGATAA GATTGAAAGG-CA AGA TGACCTTTCAATC TTATTTTTATATTTT SA0269 325601 - 324078 - | hypothetical protein TERM 306 325862 - 325908 + r 100 -9.7 -5.16841 | gap 2, opp_overlap 325862 AACATACAAAATAAA GCGACCAATTTTGCAGTGTTACG AAT TGTAA-ACTGCGAACT-GGTCGC TTTTTATTGATGTCA TERM 307 325908 - 325862 - R 93 -9 -4.87008 | gap 2, opp_overlap 325862 AACATACAAAATAAA GCGACCAATTTTGCAGTGTTAC GAATT GTAA-ACTGCGAA-CTGGTCGC TTTTTATTGATGTCA SA0270 326825 - 325932 - | hypothetical protein SA0271 327073 - 327366 + | hypothetical protein TERM 308 327375 - 327416 + F 72 -4.5 -5.00616 | opp_overlap 327378 327386, overlap 327381 327386 GCAATAAGCATTCTG AAATTGGCAAAGTCACATT TTCT AATGTGGCTTTGCTTATCA TTTTTTAAGAAAACA TERM 309 327381 - 327410 + F 100 -14.5 -3.81575 | opp_overlap 327378 327386, overlap 327375 327386 AGCATTCTGAAATTG GCAAAGTCACATT TTCT AATGTGGCTTTGC TTATCATTTTTTAAG TERM 310 327386 - 327405 + F 75 -7.2 -4.06805 | opp_overlap 327378 327386, overlap 327381 327375 TCTGAAATTGGCAAA GTCACATT TTCT AATGTGGC TTTGCTTATCATTTT SA0272 327449 - 330478 + | hypothetical protein TERM 311 330724 - 330699 - gf 100 -16.3 -4.10657 | opp_overlap 330703 TGATATGTTTCAAAA TCAAGCGAGTC ACTC GACTCGCTTGA ATGAAACTAAAAAAG TERM 312 330703 - 330720 + GF 91 -11.3 -3.06183 | opp_overlap 330699 ATGTTTCAAAATCAA GCGAGTC ACTC GACTCGC TTGAATGAAACTAAA SA0273 330478 - 330936 + | hypothetical protein SA0274 330908 - 331150 + | hypothetical protein SA0275 331163 - 332497 + | hypothetical protein TERM 313 336501 - 336482 - g 77 -5 -5.02715 | overlap 336484 ATATTAAATGAAAAA TATGCGAT TTGT ATCGCAGA CTCAAGTGGAGAGTT TERM 314 336499 - 336484 - g 78 -7.6 -4.12375 | overlap 336482 ATTAAATGAAAAATA TGCGAT TTGT ATCGCA GACTCAAGTGGAGAG TERM 315 336625 - 336615 - g 71 -5.4 -4.54608 | opp_overlap 336615 TAAAACAAAGAGAAA TGGA CGG TCCA TTTGAAAAAGATTCA SA0276 332519 - 336958 + | hypothetical protein SA0277 336988 - 337380 + | hypothetical protein SA0278 337396 - 337710 + | hypothetical protein SA0279 337707 - 338384 + | hypothetical protein SA0280 338384 - 338701 + | hypothetical protein SA0281 338711 - 340555 + | hypothetical protein SA0282 340566 - 341057 + | hypothetical protein TERM 316 341073 - 341099 + F 93 -8.2 -5.055 | ACAATCTTAATGTGA GACTAAACAA TAAAGCT TTGTTTAGTC TTTTTTGGCGGTTAA SA0283 341260 - 341943 + | hypothetical protein SA0284 342089 - 342700 + | hypothetical protein TERM 317 342991 - 343013 + G 88 -7.8 -5.14698 | opp_overlap 342982 342990 342989, overlap 342982 AAGTTATTGCAAATT GCAATTATCG TAA CAATAATTGC TTTTGTTTTAAATTT SA0285 342835 - 343053 + | hypothetical protein TERM 318 343073 - 343104 + F 100 -9.6 -5.27335 | opp_overlap 343073 AACGAATTTGAAGAA GCATTAAGCGACAT TTGG GTGTTGTTTAATGC TTTTTATTTAACGGA SA0286 343185 - 343685 + | hypothetical protein SA0287 343696 - 344196 + | hypothetical protein SA0288 344207 - 344668 + | hypothetical protein SA0289 344717 - 345217 + | hypothetical protein SA0290 345228 - 345713 + | hypothetical protein SA0291 346338 - 346712 + | hypothetical protein SA0292 346862 - 347260 + | hypothetical protein TERM 319 347302 - 347360 + T 95 -12.1 -3.48738 | opp_overlap 347306 347307 347351, overlap 347307 TCTTAAGTAATTAAA TAAAGTGCTCTCTTAGAAGTAGATTTT CAGTC AATAACTGCTTTTAAGAGAGCATTTTG TATTTGATAATGCTC TERM 320 347307 - 347355 + T 100 -12 -4.82128 | opp_overlap 347307 347306 347351, overlap 347302 AGTAATTAAATAAAG TGCTCTCTTAGAAGTAGATTTT CAGTC AATAACTGCTTTTAAGAGAGCA TTTTGTATTTGATAA TERM 321 347461 - 347415 - T 86 -3.2 -5.86332 | gap 1, overlap 347417 CGAACTTAAAAAAAA TACGTTAGACAATGCACTT CTAAATATTT AAG-GCATCGACTAACGCA TTGTTCAAATATAGT SA0293 348300 - 347476 - | hypothetical protein TERM 322 347951 - 347941 - G 72 -2.6 -5.25772 | AAAGCATAATAAAAA TATT TTC AATA CTCTAGTCGGTTTAA TERM 323 348524 - 348493 - R 100 -9.6 -5.37043 | ATTTCATATAAAAAA GCCTAGTAACGA GGGGGCAA TCATTACTAGGC AGTGAGCATTTATTA SA0294 349844 - 348537 - | hypothetical protein TERM 324 351287 - 351276 - g 70 -4.4 -4.72386 | TAAATTACGTAAAAA TGCT ATTA AGCA ATTCGATCCTAAAAC SA0295 350428 - 351318 + | hypothetical protein TERM 325 351332 - 351363 + F 100 -11 -4.7629 | AATATATGAATTGGA CGTCTACATGTACT TAAA GGTATATGTAGGCG TTTTTAAATTGATCC SA0296 351567 - 352616 + | hypothetical protein SA0297 352629 - 353306 + | hypothetical protein TERM 326 353315 - 353337 + F 82 -6.2 -5.26155 | opp_overlap 353316, overlap 353317 AGAATAGTTTTATTA AGCCGGTACA TCA TGTGCCGGTA TTTTTATGTTTATGT TERM 327 353317 - 353335 + F 100 -11 -4.23487 | opp_overlap 353316, overlap 353315 AATAGTTTTATTAAG CCGGTACA TCA TGTGCCGG TATTTTTATGTTTAT SA0298 353514 - 354545 + | hypothetical protein TERM 328 355207 - 355219 + G 83 -4.8 -5.39721 | ACTTAGGTAGGCTTG GCGA AACGG TCGC TTTTTTATCTGCTAG SA0299 354888 - 355649 + | hypothetical protein SA0300 355764 - 356006 + | hypothetical protein SA0301 355981 - 356904 + | hypothetical protein SA0302 356915 - 358135 + | pyrimidine nucleoside transporter TERM 329 358224 - 358177 - T 74 -7.9 -3.85165 | gap 2, opp_overlap 358177 358178, overlap 358178 CATGGCAAAGCTAAA CCCCATCACCAAG-T-TGGCGCA ACAG CGCATCATAACTTGGTGATGGGA TTTTATCATAACAAT TERM 330 358223 - 358178 - T 75 -9.2 -2.90617 | gap 2, opp_overlap 358177 358178, overlap 358177 ATGGCAAAGCTAAAC CCCATCACCAAG-T-TGGCGCA ACAG CGCATCATAACTTGGTGATGGG ATTTTATCATAACAA TERM 331 358178 - 358223 + T 72 -8.5 -3.27406 | gap 2, opp_overlap 358178 358177, overlap 358177 ATGGCAAAGCTAAAC CCCATCACCAAG-T-TGGCGC AACAGC GCATCATAACTTGGTGATGGG ATTTTATCATAACAA SA0303 359772 - 358240 - | hypothetical protein nanA 360693 - 359812 - | N-acetylneuraminate lyase SA0305 360851 - 361711 + | hypothetical protein TERM 332 361969 - 361917 - T 82 -5.3 -5.38497 | gap 4, opp_overlap 361917 361920, overlap 361918 ATTGAAATTAAAAAA GCACCTAGCAACTCGTTAGGACAATCA CGA TGATTGTC-TA-C-AGTTGC-AGGTGG ATTTGAATATACTAC TERM 333 361968 - 361918 - T 80 -8.8 -3.81472 | gap 4, opp_overlap 361917 361920, overlap 361917 TTGAAATTAAAAAAG CACCTAGCAACTCGTTAGGACAATCA CGA TGATTGTC-TA-C-AGTTGC-AGGTG GATTTGAATATACTA SA0306 362788 - 361988 - | hypothetical protein SA0307 362928 - 363596 + | N-acetylmannosamine-6-phosphate 2-epimerase SA0308 365040 - 363727 - | hypothetical protein TERM 334 366286 - 366274 - g 72 -9.1 -2.74696 | overlap 366273 366271 CAACTAATCAAAGAT GCGCT TCA AGCGC CTAAAACACGTTCGA geh 365458 - 367533 + | glycerol ester hydrolase TERM 335 367640 - 367679 + T 78 -9.3 -3.34646 | opp_overlap 367641 367642, overlap 367638 367637 367642 AGTAAAGTGAAATAA AGCGCCTGTCTCATTAG CGAAAA CTAAAGGGACAGGCGTA TCTGTTTATGAGCTT TERM 336 367678 - 367641 - T 100 -9.1 -4.53439 | opp_overlap 367640 367638 367637 367642, overlap 367642 GTAAAGTGAAATAAA GCGCCTGTCTCATTAGC GAAA ACTAAAGGGACAGGCGT ATCTGTTTATGAGCT TERM 337 367677 - 367642 - T 100 -12.6 -3.30979 | opp_overlap 367640 367638 367637 367642, overlap 367641 TAAAGTGAAATAAAG CGCCTGTCTCATTAGC GAAA ACTAAAGGGACAGGCG TATCTGTTTATGAGC TERM 338 367642 - 367677 + T 100 -14.1 -3.23335 | opp_overlap 367642 367641, overlap 367640 367638 367637 TAAAGTGAAATAAAG CGCCTGTCTCATTAG CGAAAA CTAAAGGGACAGGCG TATCTGTTTATGAGC SA0310 368602 - 367775 - | hypothetical protein SA0311 369874 - 368675 - | hypothetical protein SA0312 370176 - 371177 + | hypothetical protein SA0313 371211 - 371543 + | hypothetical protein SA0314 371544 - 372344 + | hypothetical protein SA0315 372331 - 373278 + | hypothetical protein SA0316 373256 - 374278 + | hypothetical protein SA0317 374594 - 375619 + | hypothetical protein ulaA 377059 - 375713 - | ascorbate-specific PTS system enzyme IIC SA0319 377358 - 377074 - | hypothetical protein SA0320 377803 - 377360 - | hypothetical protein SA0321 379763 - 377808 - | hypothetical protein SA0322 379975 - 380394 + | hypothetical protein TERM 339 380404 - 380425 + F 100 -9.5 -4.39414 | CAATAAATGGTAAGT GTGACTGGT AGAA ATCAGTCAC TTTATCTTTAATATT SA0323 380501 - 381856 + | hypothetical protein TERM 340 381865 - 381901 + F 78 -6.6 -4.56775 | AGGTTAAATATTTCG TACACTTCTGGCTGAG TATAT TTCGGTCGGAAGGGTA TTTTTCGAAAAAAAT SA0324 381960 - 382418 + | hypothetical protein glpT 383840 - 382482 - | glycerol-3-phosphate transporter TERM 341 382666 - 382682 + g 88 -7.9 -5.09895 | opp_overlap 382666, overlap 382664 AATCCTGTTAATCCA GCTGCTG TGC CAGCTGC TTTTTTAGGTACATA SA0326 384152 - 385078 + | hypothetical protein SA0327 385092 - 386153 + | hypothetical protein SA0328 386167 - 386733 + | hypothetical protein SA0329 387787 - 386792 - | hypothetical protein TERM 342 387973 - 387957 - H 79 -8 -4.20367 | overlap 387930 GGCCCCAACAAAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA SA0330 388152 - 388697 + | hypothetical protein TERM 343 388711 - 388749 + F 100 -11.2 -4.32046 | opp_overlap 388716, overlap 388716 388744 GACAAATTAGACTTA CAAAAGAGTGATGACATT TAA AATGGCATCGCTCTTTTA TTTAATTTTTGAAAA TERM 344 388716 - 388744 + F 100 -11.1 -5.10516 | opp_overlap 388716, overlap 388711 ATTAGACTTACAAAA GAGTGATGACATT TAA AATGGCATCGCTC TTTTATTTAATTTTT TERM 345 388744 - 388716 - f 88 -8.9 -4.45485 | opp_overlap 388716 388711 ATTAGACTTACAAAA GAGTGATGACATT TAA AATGGCATCGCTC TTTTATTTAATTTTT SA0331 388964 - 389818 + | hypothetical protein SA0332 389929 - 391044 + | hypothetical protein SA0333 391022 - 392737 + | hypothetical protein TERM 346 392763 - 392735 - T 100 -9 -5.22039 | opp_overlap 392742, overlap 392742 TTTAAATTTAAAAAA TAAAAAACAGGC CGAGT GCCTGTTTTTTT GTTGCTGTATTGCGG TERM 347 392756 - 392742 - T 95 -7.1 -6.04324 | opp_overlap 392742, overlap 392735 TTAAAAAATAAAAAA CAGGC CGAGT GCCTG TTTTTTTGTTGCTGT TERM 348 392742 - 392756 + T 95 -7.1 -5.85737 | opp_overlap 392742 392735 TTAAAAAATAAAAAA CAGGC CGAGT GCCTG TTTTTTTGTTGCTGT SA0334 393640 - 392978 - | hypothetical protein TERM 349 393503 - 393479 - G 73 -3.6 -5.04868 | TGAAATGAAACAAAA CGCGATGA AAAATATAA TCATCACG TATATTTGGATCATT SA0335 393911 - 393696 - | hypothetical protein SA0336 394408 - 394019 - | hypothetical protein SA0337 394648 - 394851 + | hypothetical protein SA0338 394848 - 395561 + | hypothetical protein SA0339 395586 - 396428 + | hypothetical protein SA0340 396428 - 397057 + | hypothetical protein TERM 350 397100 - 397135 + T 100 -10.7 -4.90906 | gap 1, opp_overlap 397097 TTGAAATAATATTTA GAGCAGGTGATAAATC AATAC GATT-ATCATCTGCTC TTTTTGGTGTTGTGG TERM 351 397413 - 397369 - T 73 -8.2 -3.42996 | opp_overlap 397403 GATCATGTAGCATAA CTGAATCCAAAAGTAT AATGTGAAGTTCG ACACTTTTGGATTCAG TTCAAATACTTTGAC SA0341 398577 - 397444 - | hypothetical protein TERM 352 397499 - 397485 - G 70 -4.2 -4.65933 | GATTTTTAAAATAAA TCAGCA TGA TGCAGA AAGTCGCAACGGATA SA0342 399116 - 400297 + | hypothetical protein TERM 353 400352 - 400301 - T 72 -6.9 -4.18213 | gap 1, opp_overlap 400306, overlap 400306 AAGTATAAATAATAA GAAAACAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTGTTTTT ATTTGTTTATGGATT TERM 354 400306 - 400347 + T 90 -6.8 -5.56573 | gap 1, opp_overlap 400301 400306 TAAATAATAAGAAAA CAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTG TTTTTATTTGTTTAT TERM 355 400347 - 400306 - T 83 -6.8 -5.04082 | gap 1, opp_overlap 400306, overlap 400301 TAAATAATAAGAAAA CAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTG TTTTTATTTGTTTAT SA0343 401132 - 400380 - | hypothetical protein metE 403403 - 401175 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 356 401776 - 401798 + g 71 -6.4 -4.21142 | AGAATTGTTACAGGT CCAGTTAA CATACCT TTAACTGG TTTATCTGTTAAGCT TERM 357 403366 - 403380 + g 71 -6.4 -4.10188 | CTTTTTCTACCTAAT CTTGGG AAT CCTAAG TTTGATGTTTTAATT SA0345 405241 - 403400 - | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein TERM 358 404341 - 404365 + gr 76 -3.5 -5.37345 | GAGATGGATTGAAAA GTGCTTTCGTT GGT ATCGGAATCAC TTTTTTGTCATTAAC SA0346 406370 - 405210 - | hypothetical protein TERM 359 405515 - 405489 - GR 81 -8 -4.08887 | opp_overlap 405489 405497 ATCAGCTAAACGAAA GCCAATAACGGC ACC GCCATTTTTAGC TTGTTCTAAATGAGC TERM 360 406147 - 406124 - GR 81 -7.5 -4.35926 | overlap 406138 ATTTGAAAGTCAAAA GTACTGCTG AAATAG CAGCAATAC CTGATGCAAAAGCAA SA0347 407470 - 406367 - | hypothetical protein TERM 361 407502 - 407548 + H 91 -10.9 -3.82202 | opp_overlap 407502 407542 AAGAAAAAATAAAAA GCTTCCGTCCTTCGTACCCGA ATGAA TCGGATAAAAAGGACGAAAGC TTATGTTTCGCGGTA TERM 362 407548 - 407502 - H 100 -17.5 -5.84011 | opp_overlap 407502, overlap 407542 AAGAAAAAATAAAAA GCTTCCGTCCTTCGTACCCGA ATGAA TCGGATAAAAAGGACGAAAGC TTATGTTTCGCGGTA TERM 363 408794 - 408773 - g 70 -2.3 -5.32565 | gap 1, overlap 408785 TAATGAATTAAAAAA TGTTT-CGTC AAA GTCGGAAACA GACAAAGTAGATATA SA0348 408141 - 408977 + | hypothetical protein SA0349 409131 - 410012 + | hypothetical protein TERM 364 410232 - 410214 - g 87 -2.4 -6.11019 | overlap 410217 AAAAACTAAAAAAAA TCATCGTA TCT CAGGATGA TACACAAAGATAGGA SA0350 410042 - 410245 + | hypothetical protein TERM 365 410278 - 410306 + G 77 -9.7 -2.99972 | opp_overlap 410293, overlap 410277 TTAACAGCAGGTATC GTTGGCTTACCAA ACG TTGGTAAATCAAC ATTATTTAATGCAAT SA0351 410257 - 411354 + | translation-associated GTPase TERM 366 411394 - 411417 + T 71 -6 -4.50058 | opp_overlap 411394, overlap 411389 AGTATATATGTAGAA GAGGCGGA ATCAATTG TTCGCCTC TTTTAATTATGCGTA SAS009 411631 - 411440 - | hypothetical protein TERM 367 411571 - 411553 - G 72 -6 -4.30719 | overlap 411555 CCTTTGCACAATAAA GCCATTCA GGA TGAATGCC ACTATTAAGTATCTC rpsF 411875 - 412171 + | 30S ribosomal protein S6 TERM 368 412659 - 412638 - g 79 -9.5 -3.4082 | GAAACAATCTGATAA TCCATTTGC AAAT GCAAACGGA CCGATTGATATAAGT ssb 412192 - 412695 + | single-strand DNA-binding protein of phage phi PVL TERM 369 412886 - 412867 - g 73 -8.6 -3.32844 | opp_overlap 412867 CGTTTTATCTCAGAA CGCGGTAA AATT TTACCACG TCGTGTAACTGGTAC rpsR 412747 - 412989 + | 30S ribosomal protein S18 TERM 370 413006 - 413033 + T 95 -6.2 -5.88197 | opp_overlap 413007, overlap 413007 ATTTAATATATTATA ACCCTCGTAGGC ATAG GCTTATGGGGGA TTTTTTTATGTTTGG TERM 371 413007 - 413032 + T 91 -9.7 -4.10478 | opp_overlap 413007, overlap 413006 TTTAATATATTATAA CCCTCGTAGGC ATAG GCTTATGGGGG ATTTTTTTATGTTTG TERM 372 413164 - 413201 + T 79 -5.7 -5.10461 | opp_overlap 413167, overlap 413167 413170 TTTAGATGCATAAAA AAAGAACTACGCATTTT AAAT AAAATGCATAGCTCTTC TTTTTCTTGCATACG TERM 373 413198 - 413167 - T 100 -11.8 -5.65177 | opp_overlap 413164 413167 413170 AGATGCATAAAAAAA GAACTACGCATTTT AAAT AAAATGCATAGCTC TTCTTTTTCTTGCAT TERM 374 413167 - 413198 + T 81 -7.4 -4.64495 | opp_overlap 413167, overlap 413164 413170 AGATGCATAAAAAAA GAACTACGCATTTT AAAT AAAATGCATAGCTC TTCTTTTTCTTGCAT SA0355 414240 - 413266 - | hypothetical protein TERM 375 413900 - 413917 + g 70 -4.2 -4.80656 | TCATCTATTATTTTA TAACCA TCTTCT TGGTTA TTTTCTGTTATTAGT SA0356 414546 - 414292 - | truncated integrase SA0357 415162 - 415773 + | hypothetical protein TERM 376 415819 - 415850 + F 100 -11 -4.3953 | opp_overlap 415824, overlap 415823 TATTGCTAATACTTT GAAAGTTAGGTATC TAAA GGTGCCTAGCTTTC TTTGTTATGATTAGC TERM 377 415823 - 415846 + F 75 -6 -4.7458 | opp_overlap 415824, overlap 415819 GCTAATACTTTGAAA GTTAGGTATC TAAA GGTGCCTAGC TTTCTTTGTTATGAT SA0358 416142 - 416510 + | hypothetical protein SA0359 416691 - 417263 + | hypothetical protein SAS010 417663 - 417400 - | hypothetical protein SA0360 417963 - 418214 + | hypothetical protein TERM 378 418239 - 418223 - T 95 -6.7 -6.01369 | TAAATAATAAAAAAA TTCAATT GGA AATTGAA ATAAAGATGGCATTC TERM 379 418245 - 418264 + T 82 -4.3 -5.65927 | opp_overlap 418245 GGAAATTGAAATAAA GATGGCA TTCAGT TGTCATC TTTTTTATTTGCGTG SAS011 418462 - 418253 - | hypothetical protein TERM 380 418421 - 418398 - G 95 -6 -6.02919 | TGACAAATAAAAAAA GGATGACG TTGGGTTG CGCCATCC AGGAGTATTATGTTC TERM 381 418460 - 418449 - G 70 -4.4 -4.70583 | opp_overlap 418449, overlap 418444 418452 TTCATGAATATAAAA GACT GTGT AGTC ATTTAAGAACTACAC SA0361 418616 - 419221 + | hypothetical protein SA0362 419670 - 419287 - | hypothetical protein TERM 382 419817 - 419789 - R 100 -11.1 -5.29385 | AAGGCAATTAAAAAA GCATCAAACAGTA ATA TGCTGCTTGATGC AAAATGGTAAGGTAT SA0363 420566 - 419940 - | hypothetical protein SA0364 420830 - 420639 - | hypothetical protein TERM 383 420992 - 420960 - R 90 -6.5 -5.60993 | GTCGGGATAAAAAAA TAACAGCATCTTA ACAAATG TAAGATACTGTCA GTGAAACTGTGAAAA ahpF 422533 - 421010 - | alkyl hydroperoxide reductase subunit F TERM 384 422208 - 422224 + g 76 -3.7 -5.30616 | overlap 422210 TCTAAGTTTTTAATT TGGTCAA TAA TTGACTG TTTTTCTTTAGGTGC TERM 385 422210 - 422222 + g 74 -6.3 -4.2793 | overlap 422208 TAAGTTTTTAATTTG GTCAA TAA TTGAC TGTTTTTCTTTAGGT ahpC 423118 - 422549 - | alkyl hydroperoxide reductase subunit C SA0367 423610 - 424365 + | hypothetical protein TERM 386 424430 - 424379 - T 100 -14.8 -4.43815 | opp_overlap 424380 424382, overlap 424382 AGCAAGATACCAAAA TAACCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGGT-A TTTCTTGCAATGAAT TERM 387 424380 - 424430 + T 100 -16.4 -4.18488 | gap 1, opp_overlap 424379 424382, overlap 424382 GCAAGATACCAAAAT AACCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGGTA TTTCTTGCAATGAAT TERM 388 424428 - 424382 - T 100 -19 -4.31813 | gap 1, opp_overlap 424380 424382, overlap 424379 AAGATACCAAAATAA CCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGG TATTTCTTGCAATGA TERM 389 424382 - 424428 + T 100 -19 -3.69068 | gap 1, opp_overlap 424382 424379, overlap 424380 AAGATACCAAAATAA CCCGCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGGGCGGG TATTTCTTGCAATGA SA0368 425833 - 424445 - | hypothetical protein TERM 390 426579 - 426600 + H 82 -4.4 -5.52384 | overlap 426582 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 391 427996 - 427966 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 426680 - 427999 + | IS1181 transposase SA0370 429287 - 428331 - | hypothetical protein TERM 392 429045 - 429059 + g 85 -4.3 -5.69262 | opp_overlap 429045 ATCGTTTTTGACAAT GACTT GCAGG AAGTC TTTTTCTTTTTCTAA SA0371 430067 - 429405 - | hypothetical protein TERM 393 430181 - 430154 - R 100 -9.3 -5.28826 | opp_overlap 430154 AAATGGTATAAAAAA CTGTACTATCT TAAATT AGACAGTACAG TAATCTCATTTTGAA SA0372 430617 - 430210 - | hypothetical protein xprT 431130 - 431708 + | xanthine phosphoribosyltransferase TERM 394 431846 - 431860 + G 71 -5.7 -4.56775 | GTAGATATATTTATG TGTGG GGTTG CCACA TTTTTACAAGCCAAT pbuX 431708 - 432976 + | xanthine permease guaB 433014 - 434480 + | inositol-monophosphate dehydrogenase TERM 395 435678 - 435694 + G 73 -8.7 -3.22858 | overlap 435676 435678 TGGAGACAACCATTC CCAGGAC CTG GTCTTGG TATTCGTGTACTTGG TERM 396 435826 - 435799 - g 74 -6.4 -4.32857 | opp_overlap 435817 GTCTTGAAAGAGAAA TTTGGCAATACT TCAC AGTGTTACCAAA CATTCAATCAGTAGG guaA 434505 - 436046 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 397 436086 - 436057 - T 72 -7.9 -3.66274 | opp_overlap 436062, overlap 436062 AATAATTATATATAA TAAAACCACCTGT TTGC ACGGGTGGTTTTT AATTTGAGTAGTTGG TERM 398 436081 - 436062 - T 88 -7.8 -4.87592 | opp_overlap 436062, overlap 436057 TTATATATAATAAAA CCACCTGT TTGC ACGGGTGG TTTTTAATTTGAGTA TERM 399 436062 - 436081 + T 100 -10 -5.00138 | opp_overlap 436062 436057 TTATATATAATAAAA CCACCTGT TTGC ACGGGTGG TTTTTAATTTGAGTA SA0377 436695 - 436159 - | hypothetical protein TERM 400 436988 - 436961 - R 100 -9.2 -5.72616 | overlap 436963 436973 ATTTATATAAAAAAA GAGGCCAGATGA CGTA TCATCTGACCTT CAGCTAAAACGCTGA TERM 401 436986 - 436963 - R 100 -11.8 -4.50122 | overlap 436961 436973 TTATATAAAAAAAGA GGCCAGATGA CGTA TCATCTGACC TTCAGCTAAAACGCT SA0378 437791 - 437087 - | hypothetical protein SA0379 438486 - 438190 - | transposase SAS012 438875 - 438723 - | hypothetical protein SA0380 439766 - 439407 - | hypothetical protein SA0381 440630 - 439785 - | hypothetical protein set6 441102 - 441782 + | superantigen-like protein TERM 402 441773 - 441763 - f 82 -4 -5.59879 | GACAAATACAAAAAA TTCT AGT AGAA ATGAAATAATACTTT TERM 403 441837 - 441867 + F 100 -12 -5.40072 | opp_overlap 441836 441840 TTATGGAAATATATG GAAGTTAAGCGACG TAC TGTTGCTTAGCTTC TTTTTTTGAGGGGAA TERM 404 442055 - 442035 - f 75 -5.5 -4.69656 | AATTACGTAATAAAA CAATCTAAT TAT AATAGATTG GAGCATACAACTATG set7 442068 - 442763 + | superantigen-like protein TERM 405 442805 - 442838 + F 91 -9 -4.81083 | opp_overlap 442805 442808 TGAAATTGAAATAGA GAGGTTAAGTGACG ATCAAA CGTTGCTTAACTTC TTTTTAATGCTTAAA set8 443054 - 444124 + | superantigen-like protein set9 444488 - 445366 + | superantigen-like protein set10 445730 - 446434 + | superantigen-like protein 5 TERM 406 446477 - 446506 + F 100 -10.1 -5.47159 | opp_overlap 446491 TATGGATAGTATAGA GGAGTTAGGCAAC ATAA GTTGCTTAGCTTC TTTTTTGTGTTGGCG TERM 407 447180 - 447168 - g 100 -9.1 -5.59879 | GATAAATATAAAAAA GGCCT TGA AGGCC AGAATGTCTTTGTGG set11 446880 - 447575 + | superantigen-like protein 7 TERM 408 448461 - 448451 - g 73 -4 -5.14563 | CTGTTGATTAAAAAA TACA AAC TGTA TGAAGGGTCAGCTGA set12 447914 - 448612 + | superantigen-like protein TERM 409 448644 - 448634 - f 74 -5.4 -4.88495 | ATATATAGAATAAAA GCTT AAG AAGC GGTTTAATAATCCCA set13 448989 - 449687 + | superantigen-like protein set14 450053 - 450736 + | superantigen-like protein SAS013 450789 - 450947 + | hypothetical protein TERM 410 451851 - 451865 + G 71 -6.4 -4.16016 | CCGTAATGATGATAC GTTGGA AAA TCCAGC TTTCTTAGGCAATAC TERM 411 452230 - 452212 - g 84 -6.7 -5.1101 | TTAGTATTTAAAAAA TGTCGCC AACAA GACGACA ACGTATTATTTATCG hsdM 451000 - 452556 + | type I site-specific deoxyribonuclease LldI chain hsdM hsdS 452549 - 453760 + | restriction modification system specificity subunit TERM 412 453857 - 453878 + F 100 -8.7 -5.36441 | opp_overlap 453857 CGAACATTAAATTTA GGCACTGTG AAAG CGCAGTGTC TTTTTTGTGTCGAAA TERM 413 454181 - 454157 - g 82 -4.4 -5.40004 | opp_overlap 454159, overlap 454160 TATGAAATTAAAAAA TATTGCTAAA GCAAG TTTAGCACTA GGGATTTTAACAACA set15 454143 - 454826 + | superantigen-like protein TERM 414 455433 - 455421 - g 84 -5.5 -5.54338 | CAACTAAAAGAAAAA GATGG ACA CCACC AAGTTTTCATCGAAC SA0394 454848 - 456335 + | hypothetical protein TERM 415 456350 - 456408 + T 100 -8.6 -5.72053 | gap 2, opp_overlap 456350 456366 ATTAATAAAATAAAA CAGCTTAATGATGTAATGAAATTAGTGA GTTAA TCACTGACTTCA--ACGTCATTGAGCTG TTTTTTATTTGCTTC TERM 416 456408 - 456350 - T 75 -4.2 -5.28831 | gap 2, opp_overlap 456350, overlap 456366 ATTAATAAAATAAAA CAGCTTAATGATGTAATGAAATTAGTGA GTTAA TCACTGACTTCA--ACGTCATTGAGCTG TTTTTTATTTGCTTC SA0395 456752 - 456444 - | hypothetical protein lpl1 457089 - 457892 + | hypothetical protein lpl2 457923 - 458717 + | hypothetical protein lpl3 458762 - 459550 + | hypothetical protein SA0399 459874 - 460356 + | hypothetical protein lpl4 460417 - 461202 + | hypothetical protein lpl5 461221 - 462003 + | hypothetical protein lpl6 462060 - 462854 + | hypothetical protein TERM 417 463337 - 463319 - g 70 -4 -4.99134 | opp_overlap 463319, overlap 463327 AGTTGAAATGAAAAA TAATAAAA TTA TCTTATTA GATAAAGTAGAAGAT TERM 418 463342 - 463327 - g 77 -4.8 -5.16681 | opp_overlap 463319, overlap 463319 TGAAAAATAATAAAA TTATCT TATT AGATAA AGTAGAAGATATAAA lpl7 462906 - 463706 + | hypothetical protein lpl8 463725 - 464507 + | hypothetical protein TERM 419 465132 - 465114 - g 70 -4 -4.99134 | opp_overlap 465114, overlap 465122 465126 AGTTGAAATGAAAAA TAATAAAA TTA TCTTATTA GACAAGGTAGAAGAT lpl9 464686 - 465501 + | hypothetical protein TERM 420 465844 - 465823 - g 77 -5.9 -4.66938 | ATTTTCAAGACAAAA TGTTACCAA TGCT TTGGAAACA GTTAAAGATGGATAT SA0406 465491 - 466816 + | hypothetical protein SA0407 466813 - 467136 + | hypothetical protein SA0408 467155 - 467469 + | hypothetical protein SA0409 467958 - 467758 - | hypothetical protein SA0410 468137 - 469339 + | hypothetical protein TERM 421 469416 - 469427 + T 78 -4.4 -5.48213 | opp_overlap 469410 469416 ATAAAAAGTTAAGAT GTTC TTAG GAAC TTTTTGTTTTCAATC TERM 422 469494 - 469521 + T 100 -9.2 -5.20783 | TGCATTTTATCCATA GGGCTAGGACAT GTAT GTGTCTTAGTCC TTTTTATATTTGCGT SAS014 469896 - 469753 - | hypothetical protein TERM 423 469966 - 469941 - H 91 -9.7 -4.21322 | overlap 469936 TCAACACAAAGCAAA GCCACCATCCC TATT GGTATAGTGGC CTGAGAATTTTAAGT TERM 424 470803 - 470766 - H 77 -8.5 -3.82202 | opp_overlap 470766 470768 CACGCTTAAAGAGAA CACTGCAACAAGGTA TATCAACG TACCGTGATGCAGTG TCTAGTTAAACTGAA TERM 425 470766 - 470803 + H 75 -9.2 -2.91274 | opp_overlap 470766, overlap 470768 CACGCTTAAAGAGAA CACTGCAACAAGGTAT ATCAAC GTACCGTGATGCAGTG TCTAGTTAAACTGAA TERM 426 470820 - 470869 + H 95 -7.4 -5.69262 | opp_overlap 470820 470857 CTAGTTAAACTGAAA CCTGCAATAGTAAATTTTCTGC CATTAT GTACAGAATCTACTATTGTAGG TTTTTATTTTTATAC ndhF 470927 - 472411 + | NADH dehydrogenase subunit 5 SA0412 472424 - 475129 + | hypothetical protein SA0413 475291 - 475653 + | hypothetical protein SA0414 476124 - 475882 - | hypothetical protein TERM 427 475948 - 475927 - G 71 -8.9 -2.99959 | opp_overlap 475931, overlap 475926 475929 ATATAATCGATAAAG TATACCTAA AAAA TTAGGTATA ATGACCATTGTTGCA SA0415 476336 - 477010 + | hypothetical protein SA0416 477047 - 477781 + | hypothetical protein SA0417 478150 - 479490 + | hypothetical protein TERM 428 479501 - 479534 + F 91 -4.8 -5.95539 | gap 2, opp_overlap 479501, overlap 479510 GTTAATATATAGAAG CATCTGA-C-ACACAA GTAT TTGTGTTGCTCAGGTG TTTTTTTGTTTGGAA cysM 479707 - 480612 + | hypothetical protein TERM 429 480675 - 480659 - g 71 -8.7 -2.96395 | opp_overlap 480658 ACGGACGACTATACA GGTGCAG TTA CTACACC AATTTATCAAACAAG metB 480605 - 481747 + | cystathionine gamma-synthase SA0420 482042 - 483067 + | hypothetical protein SA0421 483071 - 483730 + | hypothetical protein SA0422 483767 - 484609 + | hypothetical protein TERM 430 484619 - 484657 + F 95 -10.5 -4.08958 | gap 1 AAATAAATTATATTG CGTCCTACAAGCA-AAGT TCAT GCTTATGTTTGTAGGGCG TTATTGTTTGACAAT SA0423 484941 - 485945 + | hypothetical protein TERM 431 486079 - 486120 + T 71 -6 -4.48221 | opp_overlap 486079, overlap 486074 TTTGTATAAGAAAAA GGATTGGTCGAATGAA CTTCATGTTC TATGTTCGACCAATCC TTTTCTGAATTAGTA TERM 432 486120 - 486079 - T 81 -5.5 -5.18726 | gap 3, opp_overlap 486079 486074 TTTGTATAAGAAAAA GGATTGGTCG-A-AT-GAAC TTCAT GTTCTATGTTCGACCAATCC TTTTCTGAATTAGTA SA0424 486408 - 486130 - | hypothetical protein SA0425 486548 - 486943 + | hypothetical protein SA0426 486933 - 487418 + | hypothetical protein TERM 433 487558 - 487521 - T 77 -5.8 -4.87807 | TTAATATAGTAAAAA GCGACCTAGTGAACA-AT TGAC ATATATCCAC-AGGTCGC TTAACTTAAGTTATA SA0427 488369 - 487587 - | hypothetical protein SA0428 489478 - 488366 - | hypothetical protein gltC 490483 - 489599 - | transcription activator of glutamate synthase operon gltB 490664 - 495163 + | glutamate synthase large subunit gltD 495181 - 496644 + | glutamate synthase subunit beta TERM 434 497039 - 497067 + F 100 -9.7 -5.7827 | opp_overlap 497039 ACTATATATAATGAA GGTAAGTGCTCAA ATT TTGAGTATTTGCC TTTTTTATTTGTCTT TERM 435 497135 - 497170 + F 91 -4.9 -5.86976 | gap 1 CATTGAGATTGGAAG GGCATTTGGCT-TGTG CAATA TACATAGCTAAATGTC TTTTTTGTTTTGTGA treP 497474 - 498901 + | PTS enzyme II, phosphoenolpyruvate-dependent, trehalose-specific TERM 436 498915 - 498937 + F 70 -5.5 -4.27467 | AATAAAATAAAAAAG GGGCGTTCG TTATT TGGACGTCC TTTATTACGTTATAA SA0433 498965 - 500605 + | alpha-glucosidase SA0434 500630 - 501358 + | hypothetical protein SA0435 502001 - 502525 + | hypothetical protein TERM 437 503419 - 503395 - g 77 -5.7 -5.02074 | GCATCTTTTAAAAAA TACCATCAGTT TAT AACAGAGGGTA AAGAAGTGAATCGCC TERM 438 503852 - 503838 - g 88 -7.2 -4.93595 | ACAAAAATCTAAAAA TGCATT TTC AATGCA ACAAATTGCAAAAGT dnaX 502594 - 504291 + | DNA polymerase III gamma and tau subunits SA0437 504381 - 504698 + | hypothetical protein TERM 439 504755 - 504790 + G 74 -6.8 -4.30978 | opp_overlap 504754 504775 TAGCTTTATGAAATT GCCAGGCATTGGTC CAAAGACA GCCCAACGTCTGGC TTTTCATACCTTAGA recR 504705 - 505301 + | recombination protein RecR TERM 440 505339 - 505376 + F 70 -8.7 -2.6891 | opp_overlap 505348, overlap 505347 505348 AATTTAATACTATAG TAAGAAAAGTTACAGTG TAAT CATTGTGGCTTTTTTTA TGGTGTGGTGTGATG TERM 441 505347 - 505368 + F 85 -3.7 -5.69473 | opp_overlap 505348, overlap 505339 505348 ACTATAGTAAGAAAA GTTACAGTG TAAT CATTGTGGC TTTTTTTATGGTGTG TERM 442 506120 - 506104 - f 79 -5.9 -5.09426 | overlap 506105 GTTAATTCCAAAAAA CGTAACT ATA AGTTACA AACATTATTTAGTAT TERM 443 506366 - 506345 - f 83 -10.3 -3.25079 | overlap 506343 TAATACCGGATAATA TTTTGAACC GCAT GGTTCAAAA GTGAAAGACGGTCTT TERM 444 506797 - 506779 - f 71 -8.8 -2.75963 | overlap 506778 AGTCTGATGTGAAAG CCCACGGC TCA ACCGTGGA GGGTCATTGGAAACT TERM 445 508107 - 508080 - f 70 -5.6 -4.28115 | ATTCATAAGAAATAA TCGCTAGTGTTC GAAA GAACACTCACAA GATTAATAACGCGTT TERM 446 508483 - 508464 - f 90 -10.8 -3.66803 | opp_overlap 508463 508462 CGGGAAGAGCCCAAA CCAACAAG CTTG CTTGTTGG GGTTGTAGGACACTC TERM 447 511325 - 511340 + F 100 -9 -6.06529 | GCGATGAGCCGCATT GAGACC GCAA GGTCTC TTTTTTTTATGTCTA TERM 448 511603 - 511618 + F 100 -9 -5.76633 | GCGATGAGCCGCATT GAGACC GTGA GGTCTC TTTTTTTATGTCTAA TERM 449 512021 - 511980 - f 87 -11.1 -3.4968 | opp_overlap 511980, overlap 511976 511975 ATTATAAAAAGTGAA CAGCAGTAAGATAGTTTTT AATC ATAAATCATCTTACTGCTG TTTTTAGATTTTATG TERM 450 511980 - 512021 + F 100 -11.1 -4.89729 | opp_overlap 511980 511976 511975 ATTATAAAAAGTGAA CAGCAGTAAGATAGTTTTT AATC ATAAATCATCTTACTGCTG TTTTTAGATTTTATG SA0439 512201 - 513538 + | hypothetical protein TERM 451 513914 - 513902 - g 71 -6.3 -4.183 | CGAATTTGCAATAAA TGGAT TAT ATCCA GACTTGACGATTTAT tmk 513540 - 514157 + | hypothetical protein SA0441 514185 - 514514 + | hypothetical protein TERM 452 514492 - 514508 + F 70 -5.2 -4.53636 | TATTTGTTATGCCAG TTGATG CATTC CATCAA TTTTAATTCTATAAT TERM 453 514968 - 514947 - g 72 -5.9 -4.34223 | opp_overlap 514946, overlap 514950 AATGCAATTAAGAAA GAACAAGTT GAAC AACTTGTGC GTCATATGAATCAAC TERM 454 514965 - 514950 - g 72 -6.2 -4.27694 | opp_overlap 514946, overlap 514947 GCAATTAAGAAAGAA CAAGTT GAAC AACTTG TGCGTCATATGAATC TERM 455 515430 - 515409 - g 91 -4.5 -5.93252 | GCTAAAAATAAAAAA CTGCAAT CTTTAACT ATTGCAG CTGTGAATGGTTTCT TERM 456 515521 - 515510 - g 71 -3 -5.09895 | TAGTGATTTAAAAAA TGAT ATTG ATCA ATATGCGCAAAAGTT holB 514728 - 515654 + | DNA polymerase III, delta prime subunit SA0443 515823 - 516458 + | hypothetical protein SA0444 516454 - 516822 + | DNA replication intiation control protein YabA TERM 457 516874 - 516898 + F 75 -7.2 -4.06361 | opp_overlap 516874 516886 ATATGGTTTGGATAA GTCTGAGACA ATGCA TGTTTCAGGC TTTAATTGTGTATAA TERM 458 517025 - 517013 - f 72 -4.9 -4.87318 | GTTAAAAGTCAAAAA TACAT CGA ATGTA GTTAGGCATATAATA TERM 459 517256 - 517266 + G 71 -6.8 -4.16033 | TATGTTCAGGCAATG GGGT GAT ACCC TTGTTATTGTTTGCG TERM 460 517446 - 517404 - g 76 -6.7 -4.62783 | gap 1, opp_overlap 517404 CATGGATTTGAAAAA CGTTACTAAAGTAT-TTA AACCTTCA CAATATACTTTAGTAACG TGTAATCCGCCTTAT SA0445 517096 - 517821 + | hypothetical protein SA0446 517814 - 518062 + | hypothetical protein SA0447 518064 - 518903 + | hypothetical protein TERM 461 519378 - 519368 - g 71 -3.2 -5.17507 | AAAATTCAAGAAAAA GCTC AAA AAGC TGGTAAGACAGAAAT TERM 462 519665 - 519651 - g 87 -10 -4.08216 | TTATTGGTGGCAAAA GTCCAG ATT CTGGAC ACGAAGTTGAACTAG metS 519188 - 521161 + | methionyl-tRNA synthetase SA0449 521192 - 521965 + | hypothetical protein TERM 463 522084 - 522058 - f 81 -7.4 -4.54727 | TTTTTTAAATTAAAA TATCGTACATGT GCA ATACGTACGATA GAGATGGTTAGAGCT SA0450 522132 - 522668 + | hypothetical protein ksgA 522679 - 523572 + | dimethyladenosine transferase veg 523672 - 523935 + | hypothetical protein TERM 464 523999 - 524025 + F 100 -8.8 -5.27335 | TTATGATAATTATTT GAGTGTTGGGCA TTA TGTTCAATACTC TTTTTATTTACAAAA SA0453 524245 - 525093 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 465 525399 - 525411 + G 73 -4.1 -4.96501 | AGAAAGAACGTTTGT TACCT GGC GGGTA TTTATTTTTATCAGA purR 525107 - 525931 + | purine operon repressor SA0455 525948 - 526328 + | hypothetical protein spoVG 526400 - 526702 + | regulatory protein SpoVG TERM 466 526753 - 526783 + F 100 -12.7 -5.75822 | TAAGTTGATTTGATA CTGTCGATAAAGC ATAAA GCTTTGTCGGCAG TTTTTTTAGTTTGTA gcaD 527067 - 528419 + | hypothetical protein prs 528566 - 529531 + | ribose-phosphate pyrophosphokinase TERM 467 529766 - 529750 - g 75 -5.1 -4.85618 | overlap 529751 AAACAATTAAGAAAA TCTGGTA AAG TACCAGC AGTAGTATACGGTTA TERM 468 529765 - 529751 - g 75 -8.6 -3.48931 | overlap 529750 AACAATTAAGAAAAT CTGGTA AAG TACCAG CAGTAGTATACGGTT TERM 469 529973 - 529937 - g 74 -6.7 -4.33653 | overlap 529940 CACTTAAAAACCAAA TTACTCACATTGACTTC TTA GCAATCAATATGAGTGA AGAACGTACTGTTGA rplY 529681 - 530334 + | 50S ribosomal protein L25/general stress protein Ctc TERM 470 530377 - 530408 + F 100 -10.3 -5.21506 | opp_overlap 530377 530397, overlap 530374 TACTTTGTTTAACAA GCACTGTGCTTAT TTTAAT ATAAGCATGGTGC TTTTTGTGTTATTAT TERM 471 530469 - 530427 - f 71 -6.6 -3.96148 | opp_overlap 530423 530429, overlap 530428 TTGTGTTATTATAAA GCTTAATTAAACTTTATTAC TTT GTACTAAAGTTTAATTAATT TTAGTGAGTAAAAGA TERM 472 530468 - 530428 - f 77 -10.1 -2.97475 | opp_overlap 530423 530429, overlap 530427 TGTGTTATTATAAAG CTTAATTAAACTTTATTAC TTT GTACTAAAGTTTAATTAAT TTTAGTGAGTAAAAG TERM 473 530429 - 530467 + F 100 -13.6 -4.2828 | opp_overlap 530428 530427, overlap 530423 GTGTTATTATAAAGC TTAATTAAACTTTATTAC TTT GTACTAAAGTTTAATTAA TTTTAGTGAGTAAAA pth 530645 - 531217 + | peptidyl-tRNA hydrolase TERM 474 532702 - 532682 - g 76 -4.1 -5.07107 | opp_overlap 532687 CAAATGCTGAAAAAA TTAAGTCTT ACC AAGATTTAA ATGTGGGAGATTATA TERM 475 532964 - 532933 - g 74 -2.4 -5.55855 | gap 1, overlap 532939 532940 TGGAAAAAAACAAAA GCAA-AAGTTCAACA AAG TGTTGAAGATATTGC TGAAGAGTTGATTGA TERM 476 532957 - 532939 - g 73 -4.6 -4.83677 | overlap 532933 532940 AAAACAAAAGCAAAA GTTCAACA AAG TGTTGAAG ATATTGCTGAAGAGT TERM 477 532956 - 532940 - g 72 -8.1 -3.46546 | overlap 532939 532933 AAACAAAAGCAAAAG TTCAACA AAG TGTTGAA GATATTGCTGAAGAG mfd 531217 - 534723 + | transcription-repair coupling factor SA0462 534713 - 536239 + | hypothetical protein SA0463 536239 - 537432 + | hypothetical protein SA0464 537429 - 537692 + | hypothetical protein SA0465 537710 - 538102 + | hypothetical protein SA0466 538207 - 538608 + | hypothetical protein TERM 478 538692 - 538721 + F 81 -6.5 -5.02323 | opp_overlap 538689 538694, overlap 538676 538694 AGCGTTAGACAATCT AAGACTGTTTCTT AAAT AAGGAGCAGTCTC TTTTATTTGTAATGA TERM 479 538694 - 538719 + F 88 -9.1 -4.12652 | opp_overlap 538689 538694, overlap 538676 538692 CGTTAGACAATCTAA GACTGTTTCTT AAAT AAGGAGCAGTC TCTTTTATTTGTAAT SA0467 538788 - 540083 + | hypothetical protein SA0468 540088 - 540627 + | hypothetical protein TERM 480 541108 - 541090 - g 83 -6.1 -5.0925 | opp_overlap 541089 TGGTAAAACGAAAAA TGATGAA GACTA TTCATCA ACTATTTTATATAAC TERM 481 541217 - 541205 - g 87 -6.3 -5.40014 | AAAGAAGAAGAAAAA CAAAG TGT CTTTG TGAGTATACTTTCAA ftsH 540884 - 542977 + | cell-division protein TERM 482 542991 - 543027 + F 100 -16.9 -4.72556 | opp_overlap 542987 543024 AATCGATTATATTCA GTACCTCTTTCTATGAT AAA GTTATAGAAAGAGGTAC TTTTATCGTTTTTAA SA0470 543205 - 544086 + | hypothetical protein cysK 544265 - 545197 + | hypothetical protein TERM 483 545214 - 545244 + F 100 -10.6 -5.626 | opp_overlap 545214 TAATGTCATTTAAAA GAGTGAGTTATCTT TTT GAGATAACTTGCTC TTTTTTTCTACCATG TERM 484 545244 - 545214 - f 70 -5.5 -4.19704 | opp_overlap 545214 TAATGTCATTTAAAA GAGTGAGTTATCT TTTTG AGATAACTTGCTC TTTTTTTCTACCATG folP 545413 - 546216 + | dihydropteroate synthase TERM 485 546489 - 546479 - g 77 -5.4 -4.94058 | GTAATGGAAACAAAA GTGA GAA TCAC TAAAGAAAACCCACC folB 546194 - 546559 + | dihydroneopterin aldolase folK 546556 - 547032 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase lysS 547571 - 549058 + | lysyl-tRNA synthetase TERM 486 549082 - 549112 + T 100 -9.8 -4.81852 | GATTGTTAGTAAGAG CTCTCGTGTATACA ACA TGTGTATGCGAGGG TTTTCTTAATTATGG TERM 487 550064 - 550048 - T 78 -9.5 -3.22475 | overlap 550051 TTCAGCGGTAGAATA CAACCTT GCC AAGGTTG GGGTCGCGGGTTCGA TERM 488 550548 - 550532 - T 79 -5.9 -5.09426 | overlap 550533 GTTAATTCCAAAAAA CGTAACT ATA AGTTACA AACATTATTTAGTAT TERM 489 550794 - 550773 - T 83 -10.3 -3.25079 | overlap 550771 TAATACCGGATAATA TTTTGAACC GCAT GGTTCAAAA GTGAAAGACGGTCTT TERM 490 551225 - 551207 - T 71 -8.8 -2.75963 | overlap 551206 AGTCTGATGTGAAAG CCCACGGC TCA ACCGTGGA GGGTCATTGGAAACT TERM 491 552444 - 552417 - T 70 -5.6 -4.28115 | ATTCATAAGAAATAA TCGCTAGTGTTC GAAA GAACACTCACAA GATTAATAACGCGTT TERM 492 555616 - 555631 + T 100 -9 -6.06529 | GCGATGAGCCGCATT GAGACC GCAA GGTCTC TTTTTTTTATGTCTA TERM 493 555976 - 556017 + T 73 -6 -4.65584 | gap 1, opp_overlap 555976 TGTATAAATAGAGAA GAGCAGTAAGA-CGGTATC TAATT GAAAATGATCTTACTGCTC TTTTATATACTTTAT SA0476 557494 - 556112 - | hypothetical protein TERM 494 556335 - 556355 + g 73 -8.3 -3.56262 | overlap 556333 TGCATACCCGTTTCA GCACCTTGA ATA TCAAGCTGC TCTTTGTAAGGTTTC TERM 495 556792 - 556802 + g 80 -2.6 -5.75599 | GATGGGAAGGCGTTA TATA TAC TATA TTTTTTTGTGATTTA TERM 496 557429 - 557445 + g 70 -2.3 -5.25976 | opp_overlap 557432, overlap 557432 TTTATCGCCTTCTTT AAATTGA CCT TCAATTA TTTGTTTTTTTAATT SA0477 557598 - 558485 + | pyridoxine biosynthesis protein SA0478 558489 - 559049 + | glutamine amidotransferase subunit PdxT TERM 497 559138 - 559107 - T 71 -4.5 -4.77165 | opp_overlap 559107 559110, overlap 559102 559110 TTGTTGAGAAGAAAA TATCTCCTTCAAA CTTAGC TTTGGAGGAGTTA TTTTTTATGTCAAAA TERM 498 559107 - 559138 + T 89 -6.7 -5.36441 | opp_overlap 559107 559102 559110, overlap 559110 TTGTTGAGAAGAAAA TATCTCCTTCAAA CTTAGC TTTGGAGGAGTTA TTTTTTATGTCAAAA TERM 499 559110 - 559135 + T 87 -8.4 -4.77122 | opp_overlap 559107 559102 559110, overlap 559107 TTGAGAAGAAAATAT CTCCTTCAAA CTTAGC TTTGGAGGAG TTATTTTTTATGTCA nupC 560471 - 559257 - | pyrimidine nucleoside transport protein TERM 500 560043 - 560055 + g 71 -7.7 -3.62644 | opp_overlap 560039 TTGTCCTAAAATTGC TGCAG CAA CTGCA TTGTATGATTCTAAA ctsR 560629 - 561090 + | hypothetical protein SA0481 561109 - 561675 + | hypothetical protein SA0482 561665 - 562672 + | ATP:guanido phosphotransferase TERM 501 565012 - 565000 - g 72 -2.7 -5.38047 | opp_overlap 565001, overlap 565001 GAGCGATACAAAAAA CTATC GAA GATAA TTTAAGTGAATTAAT clpC 562686 - 565142 + | endopeptidase TERM 502 565151 - 565180 + F 100 -8.7 -5.52986 | opp_overlap 565146 565151 AGCATAATTATAAAA CAGTCCAAAAC AAATTAAA GTTTTGGGCTG TTTTTTTAGTAGCAT TERM 503 565180 - 565151 - f 76 -6.5 -4.59069 | opp_overlap 565151, overlap 565146 AGCATAATTATAAAA CAGTCCAAAAC AAATTAAA GTTTTGGGCTG TTTTTTTAGTAGCAT radA 565627 - 566991 + | DNA repair protein RadA SA0485 567016 - 568089 + | hypothetical protein TERM 504 569229 - 569216 - g 74 -2.3 -5.44119 | GTTATCGTAAAAAAA GATGG CATT CCAAC GTACAATTTTGCAGT TERM 505 569658 - 569642 - g 76 -3.7 -5.35815 | overlap 569644 TATATGAAACAAAAA GATACTG AAA CAGTATT CCAATTAGCATTACC TERM 506 569656 - 569644 - g 74 -6.3 -4.29436 | overlap 569642 TATGAAACAAAAAGA TACTG AAA CAGTA TTCCAATTAGCATTA gltX 568646 - 570100 + | glutamyl-tRNA synthetase TERM 507 570420 - 570455 + F 100 -10.6 -5.32699 | gap 1, opp_overlap 570433 TGGAACCGTGCGGAA GCGCCTCTAACAATACA ATT TGTAT-GTTAGTGGTGC TTTTTTGATATTTAA cysE 570529 - 571170 + | hypothetical protein TERM 508 571640 - 571613 - g 77 -8.6 -3.61103 | GAAGGTTATGGTAAA TTAAGTCATCAA TCCA TAGATGACTTAA AAGTGGGTGCTCGTA TERM 509 572193 - 572205 + G 71 -6.3 -4.10007 | TTGATCAAATTGATG CGATT TTA AATCG TTTTGAAACAGTTAT TERM 510 572465 - 572455 - g 70 -4 -4.93547 | TGAAGCAAGGAAAAA CAAA GAT TTTG CACGAGCAGATGAGA cysS 571154 - 572554 + | cysteinyl-tRNA synthetase SA0489 572547 - 572951 + | hypothetical protein TERM 511 573124 - 573134 + G 70 -4 -5.02074 | opp_overlap 573124 CAAACTGTACCAAAA TCTA AAT TAGA TTTTTTAGCAAATGC SA0490 572959 - 573705 + | hypothetical protein SA0491 573705 - 574229 + | hypothetical protein SA0492 574310 - 574879 + | hypothetical protein secE 575193 - 575375 + | preprotein translocase subunit SecE nusG 575388 - 575936 + | transcription antitermination protein TERM 512 575949 - 575931 - f 71 -7.6 -3.48193 | opp_overlap 575931, overlap 575930 GATCAAATAGAAAAG CTTTAATT AAC AATTAAAG TTATTAAACTAACCA TERM 513 575931 - 575949 + F 72 -7.6 -3.65046 | opp_overlap 575931 575930 GATCAAATAGAAAAG CTTTAATT AAC AATTAAAG TTATTAAACTAACCA TERM 514 576016 - 576038 + F 74 -7.6 -3.72893 | AGTGTTAAAATTATG TGGTCGCGCT TTT AGAGCGCCCA TTTCGTCACGAAATG SAS015 576074 - 576124 + | hypothetical protein TERM 515 576391 - 576378 - gf 80 -6.7 -4.65895 | GCTGGTATTGAAAAA GGTTC AGGC GAACC AAACAAAACTAAAGT rplK 576117 - 576539 + | 50S ribosomal protein L11 TERM 516 577071 - 577057 - g 76 -4.2 -5.04987 | opp_overlap 577066, overlap 577058 AATACGTTCAAAAAA TCCAAC AAG GTTGGT TCGACTTCGATGTAG TERM 517 577070 - 577058 - g 71 -7.7 -3.61908 | opp_overlap 577066, overlap 577057 ATACGTTCAAAAAAT CCAAC AAG GTTGG TTCGACTTCGATGTA rplA 576747 - 577439 + | 50S ribosomal protein L1 TERM 518 577492 - 577453 - f 70 -5.8 -4.20027 | opp_overlap 577453 577463, overlap 577456 AATAAATGATATAAA CAATTACAGGCTGAAAGA AATA TCTTTCAGTCTGTAAAAA TATATTGACAATAAG TERM 519 577489 - 577456 - f 100 -14.1 -4.19324 | opp_overlap 577453 577463, overlap 577453 AAATGATATAAACAA TTACAGGCTGAAAGA AATA TCTTTCAGTCTGTAA AAATATATTGACAAT TERM 520 577463 - 577482 + F 75 -9.4 -2.8937 | opp_overlap 577456 577453, overlap 577453 ATAAACAATTACAGG CTGAAAGA AATA TCTTTCAG TCTGTAAAAATATAT TERM 521 577632 - 577658 + F 100 -12.4 -5.9003 | opp_overlap 577635 577655 TCTATGATCTTTCAA GCACTTTTTGCC GTG GGTAGAAAGTGC TTTTTTTATTAATTT TERM 522 577685 - 577655 - f 86 -10 -3.85698 | opp_overlap 577632 TGCCGTGGGTAGAAA GTGCTTTTTTTA TTAATTT TAAAAAAAGCAC CAAAAATTTAAATGG rplJ 577711 - 578211 + | 50S ribosomal protein L10 TERM 523 578220 - 578202 - f 71 -3.1 -5.18715 | overlap 578212 ACAAAAAGAAGAAAA CGCTGAA TAATT TTTAGCG TAAAAAAATTAAAAA TERM 524 578440 - 578414 - g 70 -2.3 -5.31275 | CTGCAGCAGAAAAAA CTGAATTTGAC GTTGA GTTAACTTCAG CTGGTTCATCTAAAA rplL 578254 - 578622 + | 50S ribosomal protein L7/L12 TERM 525 578654 - 578674 + F 77 -9.9 -2.90492 | opp_overlap 578652 578651, overlap 578646 TTAATAATCAAAGTT TTATAGCAA GTA TTGCTATAA TATAATGATTCTTTG TERM 526 578728 - 578695 - f 100 -14.1 -2.57564 | opp_overlap 578696 578701, overlap 578701 TGATTCTTTGAGAAG TTAAAACCCCGTTAT TTTG ATAACGGGGTTTTAT TCATTTAAAGACTGA TERM 527 578696 - 578727 + F 100 -17.6 -3.51708 | opp_overlap 578695 578701, overlap 578701 GATTCTTTGAGAAGT TAAAACCCCGTTAT TTTG ATAACGGGGTTTTA TTCATTTAAAGACTG TERM 528 578701 - 578722 + F 100 -13.1 -4.84642 | opp_overlap 578695 578701, overlap 578696 TTTGAGAAGTTAAAA CCCCGTTAT TTTG ATAACGGGG TTTTATTCATTTAAA TERM 529 578722 - 578701 - f 100 -13.1 -4.3208 | opp_overlap 578701 578696, overlap 578695 TTTGAGAAGTTAAAA CCCCGTTAT TTTG ATAACGGGG TTTTATTCATTTAAA SA0499 578797 - 579405 + | hypothetical protein TERM 530 579671 - 579659 - g 71 -7.7 -3.66883 | GGAAGACATCGTAAA CGTAG AAA CTACG CGAGAATTTCAGAAG TERM 531 580499 - 580487 - g 73 -4.1 -4.88407 | TTATTTAATCAAAAA TTAGC TGA GCCAA TTGTAAATACTGAAA rpoB 579620 - 583171 + | DNA-directed RNA polymerase subunit beta rpoC 583308 - 586931 + | DNA-directed RNA polymerase subunit beta' TERM 532 586940 - 586970 + F 100 -10.7 -5.00642 | gap 1, opp_overlap 586943 586945, overlap 586945 GGAATAACAAGTATA TAACA-GAGGCTAA TGCT TTAGCCTCTTGTTA TTTTTATGTAAATTA TERM 533 586966 - 586943 - f 74 -8.2 -3.65434 | opp_overlap 586940 586945, overlap 586945 ATAACAAGTATATAA CAGAGGCTAA TGCT TTAGCCTCTT GTTATTTTTATGTAA TERM 534 586964 - 586945 - f 87 -10.8 -3.39274 | opp_overlap 586945 586940, overlap 586943 AACAAGTATATAACA GAGGCTAA TGCT TTAGCCTC TTGTTATTTTTATGT TERM 535 586945 - 586964 + F 100 -10.8 -4.37863 | opp_overlap 586943 586945, overlap 586940 AACAAGTATATAACA GAGGCTAA TGCT TTAGCCTC TTGTTATTTTTATGT TERM 536 587139 - 587129 - g 74 -6.8 -4.41348 | TTGGTCTTAAAGAAA CGCT TAA AGCG TTAAAGAAAGATCAA SA0502 587068 - 587322 + | putative ribosomal protein L7Ae-like TERM 537 587325 - 587349 + F 74 -5.1 -4.88918 | opp_overlap 587326, overlap 587320 587326 ATTGATTAAATGAGA ATTAGTAAGTG TTT TACTTACTAAA TTTTATTTAACCTAA TERM 538 587348 - 587326 - f 72 -7.9 -3.62849 | opp_overlap 587325 587320 587326 TTGATTAAATGAGAA TTAGTAAGT GTTTT ACTTACTAA ATTTTATTTAACCTA TERM 539 587326 - 587348 + F 76 -8.6 -3.52628 | opp_overlap 587326, overlap 587325 587320 TTGATTAAATGAGAA TTAGTAAGTG TTT TACTTACTAA ATTTTATTTAACCTA rpsL 587420 - 587833 + | 30S ribosomal protein S12 rpsG 587899 - 588369 + | 30S ribosomal protein S7 TERM 540 588639 - 588610 - g 72 -5.8 -4.42386 | GCCGTATCCACAAAA TTGGTGAAACAC ACGAAG GTGCTTCACAAA TGGACTGGATGGAGC TERM 541 588850 - 588834 - g 72 -9.5 -2.71364 | TCAGGTGTTGAACCA CAAACTG AAA CAGTTTG GCGTCAGGCTACAAC fus 588492 - 590573 + | elongation factor G TERM 542 590710 - 590748 + F 74 -9.1 -2.88634 | opp_overlap 590710 590713, overlap 590709 590704 590713 TTGCATCGCTATAAA TAATTTCTCATGATGGT GAGAA ACTATCATGAGAGATAA ATTTAAATATTATTT TERM 543 590713 - 590745 + F 82 -10.8 -2.67958 | opp_overlap 590710 590713, overlap 590710 590709 590704 CATCGCTATAAATAA TTTCTCATGATGGT GAGAA ACTATCATGAGAGA TAAATTTAAATATTA TERM 544 590745 - 590713 - f 70 -6.4 -4.07133 | opp_overlap 590713 590710 590709 590704, overlap 590710 CATCGCTATAAATAA TTTCTCATGATGGT GAGAA ACTATCATGAGAGA TAAATTTAAATATTA TERM 545 590892 - 590875 - g 71 -7.7 -3.53836 | opp_overlap 590875 590877, overlap 590884 GTAAAACAACATTAA CAGCAGC AATC GCTACTG TATTAGCAAAAAATG tuf 590790 - 591974 + | elongation factor Tu TERM 546 591994 - 592039 + T 82 -10.7 -2.81535 | opp_overlap 592004 592007 592010, overlap 592007 TAATTTCTTAGATTT TATATAAAAAGAAGATCCCTC AATC GAGGGGTCTTTTTTTAATGTG TAAATTTTGTAATGG TERM 547 592029 - 592004 - T 80 -6.1 -4.9792 | opp_overlap 591994 592007, overlap 592007 592010 GATTTTATATAAAAA GAAGATCCCTC AATC GAGGGGTCTTT TTTTAATGTGTAAAT TERM 548 592007 - 592026 + T 100 -10 -5.60864 | opp_overlap 592004 592007 592010, overlap 591994 TTTATATAAAAAGAA GATCCCTC AATC GAGGGGTC TTTTTTTAATGTGTA TERM 549 592026 - 592007 - T 83 -7.8 -4.58943 | opp_overlap 592007 591994, overlap 592004 592010 TTTATATAAAAAGAA GATCCCTC AATC GAGGGGTC TTTTTTTAATGTGTA TERM 550 592153 - 592211 + T 100 -14.9 -3.65294 | opp_overlap 592158, overlap 592158 GAGTCTTGGACATTG TAAAATGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCTACTTTGAAGGGAGCATTTCA TTAGTTTATGTCCCA TERM 551 592158 - 592206 + T 100 -14.8 -4.06001 | opp_overlap 592158, overlap 592153 TTGGACATTGTAAAA TGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCTACTTTGAAGGGAGCA TTTCATTAGTTTATG TERM 552 592206 - 592158 - T 100 -14.8 -4.16943 | opp_overlap 592158 592153 TTGGACATTGTAAAA TGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCTACTTTGAAGGGAGCA TTTCATTAGTTTATG SA0507 593431 - 592256 - | hypothetical protein TERM 553 594140 - 594127 - g 71 -5.3 -4.46073 | GGTCAATACAATAAA GTGAT GTAT ATCAC TGATGGCGTTTTTAG SA0508 593602 - 594789 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 554 594805 - 594829 + F 100 -10.7 -5.66989 | overlap 594806 TATTTATTTATTTAT TCCCACGGCAA ATA TTGTCGTGGGC TTTTTTTAATGTTTA TERM 555 594806 - 594828 + F 100 -14.2 -3.97753 | overlap 594805 ATTTATTTATTTATT CCCACGGCAA ATA TTGTCGTGGG CTTTTTTTAATGTTT TERM 556 595505 - 595487 - g 70 -4.6 -4.74132 | AGATGTGATTAAAAA TGAATTAG GAC CTGATTCA GACTATTTATCTGTC SA0509 595059 - 595937 + | chaperone protein HchA TERM 557 595951 - 595935 - f 74 -5.3 -4.88163 | GCAATACAAAATAAA TAATTAA ATA TTAATTA GAGGAGCCTCATATG TERM 558 595955 - 595983 + F 91 -5.4 -5.75342 | gap 1, overlap 595958 AAATATTAATTAGAG GAG-CCTCATATG TAAA TGTATGAGGACTC TTTTTTTTGGCAAAA araB 596096 - 597733 + | ribulokinase SA0511 597947 - 598912 + | hypothetical protein ilvE 599248 - 600324 + | branched-chain amino acid aminotransferase SA0513 600574 - 601257 + | hypothetical protein SA0514 602035 - 601373 - | hypothetical protein SA0515 602645 - 602028 - | hypothetical protein SA0516 602712 - 603182 + | hypothetical protein SA0517 603329 - 604198 + | hypothetical protein SA0518 604220 - 604786 + | hypothetical protein TERM 559 604820 - 604868 + F 83 -2 -5.89921 | gap 2, overlap 604841 TATACATTAAAAATA GGTATGTAGCTTAA-GGTATT-TC ATT GAGAATGCTTTTAAGTCACATGCC TTTTTTTGTTCTAAT TERM 560 605446 - 605432 - g 70 -4.3 -4.80959 | overlap 605443 CAAGTGAGAATAAAA CAACT GAAAA AGTTG ATAGTCGTCAACTAA sdrC 605215 - 608076 + | Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein TERM 561 608091 - 608109 + F 95 -8.1 -5.56264 | opp_overlap 608079 608091 ATATGATTAACTTAA CCAGGTC CATGT GGCCTGG TTTTTTCTGTTTAGA TERM 562 608737 - 608722 - g 70 -4 -4.95876 | AATGATAATCAAAAA GAAATG GTAT CATCTC AAGGTAATGAAACGA TERM 563 609703 - 609721 + G 84 -11.8 -2.76689 | opp_overlap 609702, overlap 609702 GGAAATGTTGAAGAC CCTGGTTA CTA TAACCAGG TAGTATATGTTAATC TERM 564 610541 - 610527 - g 76 -2.8 -5.4433 | AGATACAAATAAAAA TGGTAT CCA AGACCA AGATGAAAAAGGTAT TERM 565 612503 - 612481 - g 72 -4.8 -4.70353 | overlap 612482 CACAATAAAGCAAAA GCATTACCAG AAA CAGGTAATGA AAATAGTGGCTCAAA TERM 566 612502 - 612482 - g 72 -8.3 -3.40585 | overlap 612481 ACAATAAAGCAAAAG CATTACCAG AAA CAGGTAATG AAAATAGTGGCTCAA sdrD 608443 - 612600 + | Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein TERM 567 612612 - 612630 + F 95 -8.1 -5.63517 | ATAATACAGCTTATA CCAGGTC CGTGA GGCCTGG TTTTTTATTTCAAAA TERM 568 616333 - 616355 + G 75 -10 -2.71101 | opp_overlap 616329 616338, overlap 616338 AGTGAAAATAACGGC TCAAATAACG CAA CGTTATTTGG TGGATTATTTGCAGC sdrE 612994 - 616419 + | Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein TERM 569 616431 - 616449 + F 100 -8.1 -6.2845 | opp_overlap 616430 ATAATACAATATGAC CCAGGTC CTTGT GGCCTGG TTTTTTTTTATGATT TERM 570 617327 - 617315 - g 75 -4.9 -4.87786 | GTAATGGTATAAAAA GTTTT TAT AAAAC AGTATTTAATAATTT SA0522 616540 - 618012 + | hypothetical protein SA0523 619627 - 618137 - | hypothetical protein TERM 571 619037 - 619065 + g 77 -3.3 -5.39755 | opp_overlap 619038, overlap 619038 TTCATTATTAAAGAA ATATTGTTTGTTA GCA TAGTAAACAATAA TTTTTTGTACTTCTG TERM 572 619888 - 619869 - R 100 -10 -5.21236 | opp_overlap 619869 AAGGTATAATAAAAA CGCGCAAC TAAT GTTACGCG TTTGAATTAATCATA TERM 573 619869 - 619888 + r 74 -7.8 -3.79043 | opp_overlap 619869 AAGGTATAATAAAAA CGCGCAAC TAAT GTTACGCG TTTGAATTAATCATA SA0524 620787 - 619909 - | putative GTP cyclohydrolase SA0525 621465 - 620800 - | hypothetical protein SA0526 621838 - 621479 - | hypothetical protein TERM 574 622169 - 622147 - g 77 -4.8 -5.1101 | opp_overlap 622147, overlap 622150 TTAGGATCGAAAAAA CAAGCATCAT TCT ATGTTGCATG TGAGTTATATAAAGA TERM 575 622314 - 622278 - g 82 -5.3 -5.33405 | opp_overlap 622282, overlap 622281 622282 622287 GTTATTAAATAAAAA TCAGTTAAACGTAGACA ATG TATCCACGTTTAATTTA GACGAATATGTAGGT TERM 576 622310 - 622282 - g 78 -10.5 -2.65994 | opp_overlap 622282, overlap 622281 622278 622287 TTAAATAAAAATCAG TTAAACGTAGACA ATG TATCCACGTTTAA TTTAGACGAATATGT nagB 622117 - 622875 + | glucosamine-6-phosphate isomerase SA0528 622952 - 623584 + | hypothetical protein SA0529 623586 - 624134 + | hypothetical protein TERM 577 624143 - 624183 + F 85 -2.8 -5.96894 | gap 1, opp_overlap 624146 AGAATAAAATAAAGA TAGTCGATAATA-TGATGC CTAG GCAGAAATATTATCGATTA TTTTTTTATTTAAAT TERM 578 624323 - 624304 - g 70 -2.1 -5.24989 | GCAGACACGAAAAAA TGTGGTG AAGTAG CAACACA AAGTGCATTTAAAGC SA0530 624247 - 624894 + | hypothetical protein TERM 579 625129 - 625171 + F 100 -12.3 -4.95876 | opp_overlap 625129 ATATGATGAGGAAAG TAGTGATAGCATATGACTT ACATG AAGTTGTGTGCTATCGCTA TTTTTAGTTATAATT TERM 580 625465 - 625451 - g 85 -4.2 -5.59564 | overlap 625453 AGAAAGCTAAAAAAA CCGTTG TTG CAACCG GTATCGGTAATGCAA proP 625396 - 626796 + | hypothetical protein TERM 581 626871 - 626833 - f 100 -17 -3.52459 | opp_overlap 626833, overlap 626823 ATCAATCGTATATAA GCACTTTAAAGCTAGTAG GTT CTGCTAACTTTAAAGTGC TTTTTAAATTGAGAA TERM 582 626833 - 626871 + F 100 -17 -4.74103 | opp_overlap 626833 626823 ATCAATCGTATATAA GCACTTTAAAGCTAGTAG GTT CTGCTAACTTTAAAGTGC TTTTTAAATTGAGAA TERM 583 626955 - 626926 - f 100 -15.1 -4.17296 | TTGTATATACATAAA CCCCCACTGCAAT GATT ATCGCAATGGGGG AAAGAGGGGACTTAA TERM 584 627137 - 627156 + G 78 -7.2 -4.42325 | GACTTATTTGTGTCA GTTATTGC GATT GCGATAAC TTCTTTTCTCTATAT SA0532 627131 - 627340 + | hypothetical protein TERM 585 627869 - 627840 - g 88 -7.9 -4.86862 | GTTAAAAAATGAAAA TGCAATAGCAGCC CCTG GACCACTATCGCA CTCGTTAACATTATA TERM 586 627935 - 627951 + G 72 -8.1 -3.41134 | opp_overlap 627932 627935 TTATAGGACAGACCA CTTTTCA TCC TGAAAAG TTACTTAATCAATGT TERM 587 628142 - 628116 - g 78 -2.4 -5.69068 | opp_overlap 628116 TAAAAAGATAAAAAA TCAAGCAAAT GACATAA ATTTGATTGA ATTTTTTGGTACATC vraA 627340 - 628716 + | hypothetical protein vraB 628718 - 629857 + | acetyl-CoA c-acetyltransferase TERM 588 630024 - 630006 - gf 74 -9 -3.24735 | TATGCAAATAGCGAA CTGATTTT AAC AAAATCAG CAATTAATCAAACTC vraC 629832 - 630197 + | hypothetical protein SA0536 630200 - 630469 + | hypothetical protein TERM 589 630466 - 630447 - T 82 -4.4 -5.52079 | AGATTAAAATAAAAA TTTCTTTG AGCA CAAAAAAA TAACCGATATTAGCT SAS016 630837 - 630670 - | hypothetical protein TERM 590 631260 - 631311 + r 76 -9.6 -2.84467 | opp_overlap 631261, overlap 631257 GATGATTATAAAAAA ATAACCACATCACATAAATTGAGT TCAT ACCCAATTTAAGTGGTGTGGCTAA TAATGTTGATTTATA TERM 591 631310 - 631261 - R 100 -15.3 -5.67967 | opp_overlap 631260 631257 ATGATTATAAAAAAA TAACCACATCACATAAATTGAGT TCAT ACCCAATTTAAGTGGTGTGGCTA ATAATGTTGATTTAT SA0537 632174 - 631344 - | phosphomethylpyrimidine kinase ung 632358 - 633014 + | uracil-DNA glycosylase TERM 592 633122 - 633102 - g 76 -6.3 -4.60487 | opp_overlap 633104, overlap 633104 CATGACTTTGAAAAA CATATGTAT GCC ATACATATA TTAACATCTTTATAT SA0539 633015 - 633395 + | hypothetical protein TERM 593 633821 - 633839 + G 79 -8.9 -3.77722 | AGTTTTAGGTGCGAT TACGCCA ATTGG TGGCGTA TTGTTCATCATTGGC SA0540 633528 - 633896 + | hypothetical protein TERM 594 633975 - 633963 - f 82 -6.3 -5.23396 | opp_overlap 633962 633963 633967 633973 AATAATCAAGAAAAA GAGTT ACA AACTC ATCTTTTGGGTATAG TERM 595 633973 - 634007 + F 82 -5 -5.38054 | opp_overlap 633963, overlap 633963 633962 633967 AAAAAGAGTTACAAA CTCATCTTTTGGGTAT AGA ATACCTTCGAGGTGAG TTTTTATTTATGGAA TERM 596 634874 - 634892 + G 76 -7.5 -4.08221 | overlap 634870 GTTGTGGTTAACAGG TGCTGTT ACACA AACAGCA TTTGGTTATATTGGA SA0541 634017 - 635501 + | hypothetical protein TERM 597 635553 - 635507 - T 76 -5.2 -5.03961 | opp_overlap 635510, overlap 635510 AACTAAATAATAAAA GAATCGCACAATATACCTTC TTCATTC GGAGGCGTATCGTGCGATTT TTTGTATTATAAATT TERM 598 635510 - 635550 + T 90 -6.9 -5.5208 | opp_overlap 635507 635510 TAAATAATAAAAGAA TCGCACAATATACCTTC TTCATTC GGAGGCGTATCGTGCGA TTTTTTGTATTATAA TERM 599 635550 - 635510 - T 78 -6.9 -4.57912 | opp_overlap 635510, overlap 635507 TAAATAATAAAAGAA TCGCACAATATACCTTC TTCATTC GGAGGCGTATCGTGCGA TTTTTTGTATTATAA SA0542 636094 - 635642 - | hypothetical protein SA0543 636757 - 636107 - | hypothetical protein TERM 600 637221 - 637247 + r 100 -16.8 -4.49316 | opp_overlap 637216 AGGAAGACTACTCGG GTACACTTTGCT ATG AGCAAAGTGTAC TTTGTTATTGATAAT TERM 601 637387 - 637360 - R 100 -11.5 -5.08367 | opp_overlap 637360 AAGATAAACGAAAAA TTCCAAGCTTA AACCGA TAAGCTTGGAA TTTTTTTATTAATTT TERM 602 637360 - 637387 + r 100 -11.5 -5.9003 | opp_overlap 637360 AAGATAAACGAAAAA TTCCAAGCTTA AACCGA TAAGCTTGGAA TTTTTTTATTAATTT SA0544 638172 - 637420 - | putative heme peroxidase TERM 603 638023 - 638035 + g 74 -6.3 -4.3898 | AGATTTTGATGATCT TACAG TTG CTGTA TTTTCTAAAAATGAT TERM 604 639115 - 639105 - g 70 -2.4 -5.24129 | opp_overlap 639105 GTTGCTGAGAAAAAA GCGC CAG GTGC TAAATTACAAGGTGA eutD 638340 - 639326 + | phosphotransacetylase SA0546 639329 - 640165 + | hypothetical protein TERM 605 641058 - 641074 + G 80 -6.5 -4.71426 | GGATTAGGATCGAGT GCAGCTG TCG CGGTTGC TTTTGTTCGTGCAAG TERM 606 641641 - 641631 - g 83 -6.8 -4.86033 | AAAGCTGTAGAAAAA GCTG GTG CAGC ACATACATGGATTGA mvaK1 640833 - 641672 + | mevalonate kinase mvaD 641677 - 642660 + | mevalonate diphosphate decarboxylase mvaK2 642673 - 643749 + | phosphomevalonate kinase SA0550 643926 - 644267 + | hypothetical protein TERM 607 644309 - 644265 - T 100 -12.4 -3.96497 | gap 1, opp_overlap 644270, overlap 644270 CGAAAAGCACAACAA TAAAACCTGATGGCA-GCATC ATTC AATGCGTGCCACCAGGTTTTT ATGTTTTGTCTAGAA TERM 608 644270 - 644304 + T 100 -9.4 -5.32599 | gap 1, opp_overlap 644265 644270 AGCACAACAATAAAA CCTGATGGCA-GCAT CATTCA ATGCGTGCCACCAGG TTTTTATGTTTTGTC TERM 609 644304 - 644270 - T 100 -12.3 -4.9645 | gap 1, opp_overlap 644270, overlap 644265 AGCACAACAATAAAA CCTGATGGCA-GCATC ATTC AATGCGTGCCACCAGG TTTTTATGTTTTGTC SA0551 645767 - 644319 - | hypothetical protein SA0552 646068 - 645628 - | hypothetical protein TERM 610 647226 - 647216 - g 73 -4 -5.11937 | overlap 647197 647218 AAGAATTTCAAAAAA TTGT CCA ACAA GGACTTACCCAAGCG SA0553 646693 - 648087 + | hypothetical protein SA0554 648091 - 648723 + | hypothetical protein SA0555 648770 - 649390 + | hypothetical protein SA0556 649530 - 650162 + | hypothetical protein SA0557 650610 - 651548 + | hypothetical protein TERM 611 651645 - 651657 + F 90 -7.7 -5.1101 | opp_overlap 651644 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATCCTAG TERM 612 651744 - 651725 - f 76 -9.3 -3.20164 | CTACAGGCAATGCAA GTTGGGG TGTGGG CCCCAAC ACAGAAGCTGACGAA TERM 613 651767 - 651751 - f 72 -8 -3.68024 | GGCCCCAACACAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA SA0558 651994 - 652530 + | hypothetical protein TERM 614 652546 - 652571 + F 83 -3.3 -5.67529 | overlap 652549 GACATACCTCATACT AAACGAAGTGA TTTT TTGCTTCGTTA TTTTTATTTTTAATT TERM 615 652549 - 652568 + F 74 -5 -4.855 | overlap 652546 ATACCTCATACTAAA CGAAGTGA TTTT TTGCTTCG TTATTTTTATTTTTA TERM 616 652899 - 652913 + G 74 -6.4 -4.44046 | GAAGGTAATGACATC GTTGGC TTT GCTAAC TTTATTTACGGTGAA SA0559 652698 - 653174 + | hypothetical protein SA0560 653214 - 654509 + | hypothetical protein TERM 617 654610 - 654593 - g 79 -4.1 -5.36965 | overlap 654597 TAATATCATAAAAAA TGACCCT CTAG ATGGTCA TAAAGGTACAAATAT SA0561 654552 - 655058 + | hypothetical protein TERM 618 655401 - 655387 - f 71 -7.2 -3.72241 | opp_overlap 655387 655386 TATTAACTAGGGAAA CGTTAA AAG TTAACG GTTGATATCTAACTA adh1 655557 - 656567 + | alcohol dehydrogenase TERM 619 656630 - 656665 + F 100 -10.6 -5.79588 | opp_overlap 656630 ATCATTATAATCAAA CACGAGGTTTTCATGA AAGA TAGTGAAAATCTCGTG TTTTTTTGGTTTTGA SA0563 656831 - 657259 + | hypothetical protein argS 657256 - 658917 + | arginyl-tRNA synthetase TERM 620 658931 - 658974 + F 100 -14.8 -4.89009 | opp_overlap 658931 658933 AAGAACATTTATATA CACTCCAACGTAGAGTTTCT CGAA AGATACTTTGTGTTGGAGTG TTTTTAATTAGGTAT TERM 621 659170 - 659139 - f 100 -19 -3.37464 | GCAGCAACTGCATAA GAGCCCCTAATTAA TTTA TTAATTAGGGGCTC TAAAAGGAGGGTGTA SA0565 659187 - 659822 + | hypothetical protein SA0566 660074 - 660961 + | hypothetical protein TERM 622 660977 - 661021 + F 73 -5.9 -4.6644 | gap 1 ACCATTCTAATTATG CCCCTTATTGC-TACATGTA AAAAAA TACATGTTTGAGATAAGGGG TTTTTAAAATATATT SA0567 661110 - 662060 + | hypothetical protein SA0568 662115 - 662834 + | hypothetical protein TERM 623 662849 - 662839 - g 71 -5.4 -4.4767 | CTATTTACTAGAAAA GATG GAA CATC GATACATTACAGTAC SA0569 662818 - 663618 + | hypothetical protein TERM 624 664206 - 664183 - g 77 -6 -4.72846 | GGATATATTGAAAAA GGCAAAACGA CTTA TCAATTTGCC TCAGCACCAAAAGAT SA0570 663754 - 664260 + | hypothetical protein TERM 625 664280 - 664314 + F 89 -8.8 -4.67982 | TAAATTAATCGTGCT TAACCGACAAGT TAAATCGCAAT ACTTGTCGGTTA TTTTATTACATGGCA TERM 626 664549 - 664538 - g 74 -3 -5.38047 | TACTGATATAAAAAA TTCT GAAA AGAA AGATCAAGATTATAT SA0571 664422 - 665138 + | hypothetical protein TERM 627 665142 - 665195 + F 77 -8.7 -3.6579 | gap 1, opp_overlap 665145 665150, overlap 665150 ACAAGATTATAAATA TGATAAAACTATTCA-CTTGATTAAT TGT ATTAATTGAGATGAATAGTTTTTTTA TTGTTGGAATAACTT TERM 628 665150 - 665187 + F 100 -8.1 -5.95946 | gap 1, opp_overlap 665145 665150, overlap 665142 ATAAATATGATAAAA CTATTCA-CTTGATTAAT TGT ATTAATTGAGATGAATAG TTTTTTTATTGTTGG SA0572 665307 - 666095 + | hypothetical protein TERM 629 666178 - 666145 - T 76 -6.2 -4.67234 | gap 1, opp_overlap 666145 AGGCAATGTGAAAAA GCTGATTACTATTCA TTATT TGA-TAGAAATCAGC TTTTTTTGAAATGTA TERM 630 666145 - 666178 + T 86 -6.2 -5.45726 | gap 1, opp_overlap 666145 AGGCAATGTGAAAAA GCTGATTACTATTCA TTATT TGA-TAGAAATCAGC TTTTTTTGAAATGTA TERM 631 666326 - 666291 - T 95 -6.4 -5.82281 | gap 1, overlap 666292 AAAGACATAAAAAAA GGAAGTTTAATAGAATG TAT CAT-CTATCAAACTTCA CCAAATTGCGCTAAA TERM 632 666325 - 666292 - T 91 -9.9 -4.05708 | gap 1, overlap 666291 AAGACATAAAAAAAG GAAGTTTAATAGAATG TAT CAT-CTATCAAACTTC ACCAAATTGCGCTAA sarA 666721 - 666347 - | staphylococcal accessory regulator A TERM 633 666392 - 666411 + g 83 -5 -5.57054 | GATTCGTTTATTTAC TCGACTCA ATAA TGATTCGA TTTTTTTACGTTGTT TERM 634 666823 - 666856 + r 71 -7.7 -3.38446 | GTTAGTCATAATTTT GCATTAAATAAGTTT TATT AAATATATTTAATGC TCTATTATTTAGTTA SA0574 668598 - 667669 - | hypothetical protein TERM 635 668755 - 668721 - R 100 -10 -4.81814 | opp_overlap 668718 668722, overlap 668722 ATTATCATAACAAAA TCACCCTAGACAATCA TGA TGAAAGTCTAGGGTGT TAGTATTTATACTAA TERM 636 668722 - 668754 + r 100 -13.5 -3.51406 | opp_overlap 668721 668722, overlap 668718 TTATCATAACAAAAT CACCCTAGACAATCA TGA TGAAAGTCTAGGGTG TTAGTATTTATACTA TERM 637 668754 - 668722 - R 100 -13.5 -3.48004 | opp_overlap 668722 668718, overlap 668721 TTATCATAACAAAAT CACCCTAGACAATCA TGA TGAAAGTCTAGGGTG TTAGTATTTATACTA SA0575 669017 - 668793 - | hypothetical protein SA0576 669237 - 669034 - | hypothetical protein TERM 638 669850 - 669837 - g 74 -5.3 -4.72986 | CATGCTTATCAAAAA GGTAT ACCT ATACC AGTCATTCAAAAGTA SA0577 669396 - 669956 + | hypothetical protein SA0578 669975 - 672377 + | putative monovalent cation/H+ antiporter subunit A SA0579 672364 - 672789 + | putative monovalent cation/H+ antiporter subunit B SA0580 672786 - 673130 + | putative monovalent cation/H+ antiporter subunit C SA0581 673120 - 674616 + | putative monovalent cation/H+ antiporter subunit D SA0582 674617 - 675099 + | putative monovalent cation/H+ antiporter subunit E SA0583 675096 - 675398 + | putative monovalent cation/H+ antiporter subunit F SA0584 675373 - 675810 + | putative monovalent cation/H+ antiporter subunit G TERM 639 675877 - 675916 + F 82 -4.4 -5.5208 | overlap 675878 AAATTAATCATTAAA AGAGTACTTTGAAATTGG TTAG TCGATTTTAAGGTGCTCA TTTTTTGTATTATAA TERM 640 675878 - 675915 + F 76 -7.9 -3.89621 | overlap 675877 AATTAATCATTAAAA GAGTACTTTGAAATTGG TTAG TCGATTTTAAGGTGCTC ATTTTTTGTATTATA SA0585 676150 - 678192 + | hypothetical protein TERM 641 678303 - 678333 + T 72 -4.7 -4.9041 | gap 1 GAGTTTTTATTATTA GGCGGCC-AGTCCA TTAT TGGGCTTGGTTGTC TTCTTTTTTTCTCCT SA0586 679619 - 678300 - | IS1181 transposase TERM 642 679720 - 679699 - R 82 -4.4 -5.52384 | overlap 679702 TGTGTATTAAAAAAA GCAGGAAG TTTTAC CTTCCCAC CATAAAATATGAAGA TERM 643 679948 - 679913 - R 100 -9 -5.28176 | opp_overlap 679919, overlap 679915 TGCATTCACAAAAAA TAGCCACACTCATATG ACAT CGGATGAGTGTGGCTT AAGGATCTATGGGGG TERM 644 679946 - 679915 - R 100 -11.6 -4.2748 | opp_overlap 679919, overlap 679913 CATTCACAAAAAATA GCCACACTCATATG ACAT CGGATGAGTGTGGC TTAAGGATCTATGGG TERM 645 680664 - 680694 + r 100 -14.3 -3.06183 | opp_overlap 680671, overlap 680651 680671 TATGTTGATGTGTAG CCTAAAATATTGG AGATA CCAATATTTTAGG TTGCATCAACATCAA SA0587 681668 - 680739 - | hypothetical protein SA0588 682501 - 681665 - | hypothetical protein TERM 646 681749 - 681737 - G 78 -7.7 -4.19307 | opp_overlap 681737 681736, overlap 681733 681745 GATATAAATTACAAA CGTAC AAA GTACG ATTGTCGCACCACTA TERM 647 681829 - 681850 + g 79 -4.5 -5.2189 | CACTTATTAAACTTG CTATAATCA TCAT TGAGTATAG TTTTTTACTAATTAA SA0589 683238 - 682495 - | hypothetical protein TERM 648 683952 - 683931 - g 73 -7.5 -3.73435 | opp_overlap 683931 683950, overlap 683950 AAATGAATAAAGTAA TTATCATTA AACG TAATGATAA TGTAATTATTGTCAG SA0590 683360 - 684004 + | hypothetical protein SA0591 684836 - 684084 - | hypothetical protein TERM 649 684928 - 684940 + H 71 -4.9 -4.77757 | GACTTTAGACTTACC TTAGT TAA ACTAA TTTTAATTTTTGAAA tagA 685072 - 685836 + | teichoic acid biosynthesis protein TERM 650 685857 - 685886 + T 75 -4.2 -5.25805 | opp_overlap 685852 ATGATAAAAATAAAA CCGAGGAAATCC TTAAAT GGAGATTCTCGG TTTTTTCGGTTTATT tagH 686691 - 685897 - | teichoic acids export protein ATP-binding subunit tagG 687017 - 687850 + | teichoic acid translocation permease protein TERM 651 687869 - 687899 + F 71 -6.9 -4.00347 | gap 1, opp_overlap 687869 ATTTATATGACGAAA CCCCGCTAACCATT AATA AATGGA-AGTGGGG TTCATTTTTGTTTAT tagB 688582 - 689052 + | teichoic acid biosynthesis protein B tagX 689103 - 690110 + | teichoic acid biosynthesis protein X tagD 690173 - 690571 + | glycerol-3-phosphate cytidylyltransferase TERM 652 690679 - 690631 - T 76 -7.6 -4.00842 | opp_overlap 690636, overlap 690636 ATTATAAAATAAATA TAAAACGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCGTTTTT AGTATGTTTTATTTT TERM 653 690636 - 690674 + T 100 -9.7 -4.91573 | opp_overlap 690636 690631 AAAATAAATATAAAA CGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCG TTTTTAGTATGTTTT TERM 654 690674 - 690636 - T 85 -7.5 -4.95487 | opp_overlap 690636, overlap 690631 AAAATAAATATAAAA CGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCG TTTTTAGTATGTTTT pbp4 691983 - 690688 - | penicillin binding protein 4 SA0599 692404 - 694131 + | ATP-binding cassette transporter A SAS017 694200 - 694280 + | hypothetical protein TERM 655 694754 - 694766 + G 80 -9.1 -3.65201 | opp_overlap 694747 694744 TAAAATGATGGATAT GGCTG TTG CAGCC TTATTCCCAATATTA SA0600 694488 - 695717 + | hypothetical protein TERM 656 695763 - 695804 + F 100 -13.9 -5.66229 | opp_overlap 695762 695756 695763 TTAACTAATAAATAT GTCCAGGCATGTCGTCTAT TGAT ATAGGTGAGATGCTTGGAC TTTTTTATTATTGAT TERM 657 695897 - 695872 - f 80 -6.2 -4.94902 | opp_overlap 695872 GAAGCATTATAAAAA CCAAGTGCAC ATGGTA ATACACTTGG CTTTTATGGGAAATG SA0601 696464 - 697075 + | hypothetical protein TERM 658 697108 - 697152 + F 87 -3.6 -5.86976 | overlap 697109 ACATACTTAAATAGA AGTCCACGGACAAGTTTTTG AACTA TGAAGACTTATCTGTGGGCG TTTTTTATTTTATAA TERM 659 697109 - 697151 + F 75 -7.1 -4.09746 | overlap 697108 CATACTTAAATAGAA GTCCACGGACAAGTTTTTG AACTA TGAAGACTTATCTGTGGGC GTTTTTTATTTTATA fhuA 697357 - 698154 + | ferrichrome transport ATP-binding protein TERM 660 698305 - 698328 + G 77 -5.3 -4.94972 | opp_overlap 698307, overlap 698307 GTGACGCCAAAATTC AAGCCTCTA CAATTA TAGAGGCTA TTTTTAATTATAATC TERM 661 698326 - 698307 - g 75 -8.6 -3.37537 | opp_overlap 698307 698305 GACGCCAAAATTCAA GCCTCTAC AATT ATAGAGGC TATTTTTAATTATAA TERM 662 698307 - 698326 + G 78 -7.9 -4.08682 | opp_overlap 698307, overlap 698305 GACGCCAAAATTCAA GCCTCTA CAATTA TAGAGGC TATTTTTAATTATAA fhuB 698190 - 699194 + | ferrichrome transport permease TERM 663 699649 - 699631 - g 71 -3 -5.07486 | overlap 699635 CAGTTTTAATAAAAA TGAAGGTG TTA CACCTGCG AGTATGGTATTAATA TERM 664 699953 - 699975 + G 85 -10.6 -3.36188 | overlap 699938 GCAGTGATGTTATCA TCTGCTGCTG TAG CAGTAGCAGG TTCAATTTCGTTTAT fhuG 699191 - 700207 + | ferrichrome transport permease TERM 665 700228 - 700266 + F 100 -10.6 -5.68438 | gap 1, opp_overlap 700227 AAGGACACAACTTAT TGCTATGAAAGGCACTT TATTAT AAG-GCTTTTCATAGCA TTTTTTATTTAATGA SA0605 700444 - 701409 + | hypothetical protein SA0606 701451 - 702035 + | hypothetical protein SA0607 702028 - 702390 + | hypothetical protein SA0608 702506 - 703003 + | hypothetical protein TERM 666 703051 - 703072 + F 100 -8.7 -5.2189 | TTTAACATTTGGTTG GGTTGGGAC ATAT GTTCCAGCC TTTTTTAATACTTAA TERM 667 704178 - 704164 - g 73 -8.6 -3.19642 | ACTAGCATTGATCAA CTTTGC ATT GCAAAG TGAATATCCAACTAT SA0609 703547 - 704527 + | hypothetical protein TERM 668 704586 - 704618 + F 73 -3.5 -5.28414 | gap 1, opp_overlap 704586, overlap 704580 GTTTTAACCTTAAAA GCAATTCGTCTCTA CTCTTA TCG-GGCGAATTGC TTTTTATATTTATTC TERM 669 705421 - 705399 - g 73 -7 -3.94276 | AAAATATTTCACAAA TGTCGACAGT AAA ACAATCGACA AAAAATTATCCACCA SA0610 704678 - 705721 + | hypothetical protein SA0611 706050 - 706478 + | hypothetical protein TERM 670 706489 - 706544 + T 100 -13.1 -4.37198 | gap 1, opp_overlap 706489 706493, overlap 706493 ACTAAACAACATATA TAAAGCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGCTTTA TTTTGAATTTAAATT TERM 671 706544 - 706489 - T 87 -10.9 -3.24158 | gap 1, opp_overlap 706489 706493, overlap 706493 ACTAAACAACATATA TAAAGCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGCTTTA TTTTGAATTTAAATT TERM 672 706540 - 706493 - T 77 -7.3 -4.23853 | gap 1, opp_overlap 706493 706489, overlap 706489 AACAACATATATAAA GCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGC TTTATTTTGAATTTA TERM 673 706493 - 706540 + T 100 -9.5 -4.74598 | gap 1, opp_overlap 706489 706493, overlap 706489 AACAACATATATAAA GCACTACTAAT-CGTAGTTGAT AGTTG ATCAATTACACATTAGTGGTGC TTTATTTTGAATTTA SA0612 707193 - 706687 - | hypothetical protein SA0613 707306 - 708229 + | hypothetical protein SA0614 708245 - 708919 + | hypothetical protein TERM 674 709920 - 709959 + G 100 -9.4 -4.78572 | opp_overlap 709924 AATGAAATTGTTGAA CGCATGTCGGAAGTGACA AATT TGTCATTTTAAACATGCG TTTTGTTACTTAGAA SA0615 708912 - 709952 + | hypothetical protein TERM 675 710322 - 710306 - g 83 -2.3 -5.79588 | overlap 710309 TTAAAAGGAAAAAAA TTAGAAA AGC TTTCAAA CAAGGAATTATCTGA vraF 710096 - 710857 + | ABC transporter ATP-binding protein TERM 676 711853 - 711840 - g 79 -5.3 -5.20606 | AAAGACCAACAAAAA GCTAA TCAA TTAGC AAGTGAATTAAACAA vraG 710835 - 712736 + | ABC transporter permease TERM 677 712749 - 712795 + F 86 -7.5 -5.20333 | gap 1 TAAAATATACAGATG GCTTTCAGTAGAG-TAGTGGAT TCGA ATTCACGAACTATACTGGAAGC TTTTTATTATAAATG TERM 678 713302 - 713286 - f 73 -8.1 -3.43081 | overlap 713284 ATATAAGGGCAAATA CAGTAAA TTG TTTACTG TGAGGCATTTTTGAA SA0618 713459 - 714076 + | hypothetical protein TERM 679 714345 - 714365 + G 93 -10.5 -3.98804 | GATTAGTTGTTGTGT TAGCTGCAA TAC TTGCGGCTA TTATTTGGAATTTAG SA0619 714092 - 715099 + | hypothetical protein TERM 680 715118 - 715158 + T 100 -11.4 -5.72616 | opp_overlap 715117 715118 AAAATAAAACTAAAC TGAACTTCAGTATCACAA ACATA TGGTGGTATTGAAGTTCA TTTTTTTATGTAAGT TERM 681 715621 - 715607 - T 70 -5.8 -4.25104 | overlap 715613 TTTTTTGTACCAAAA TGAAAA TTT TTTTCA AAAATAAAAAACTAG TERM 682 715633 - 715662 + T 90 -11.7 -3.0094 | gap 1, opp_overlap 715633, overlap 715641 TTCAAAAATAAAAAA CTAGCAATCTCACA TGA TGTGA-ATTGCTAG TATATATCAGTACAA TERM 683 715662 - 715633 - T 100 -11.7 -5.93252 | gap 1, opp_overlap 715633 715641 TTCAAAAATAAAAAA CTAGCAATCTCACA TGA TGTGA-ATTGCTAG TATATATCAGTACAA SA0620 716484 - 715687 - | hypothetical protein SA0621 716845 - 717489 + | hypothetical protein SA0622 718186 - 720336 + | hypothetical protein SA0623 720416 - 720841 + | hypothetical protein TERM 684 720851 - 720884 + F 70 -3.9 -5.04601 | gap 1, opp_overlap 720852, overlap 720852 ATTTAATTGAAATTG AGTGTCGA-AAGCATA GAA TTTGCTTATCGGCACA TTTTTAATTTATACA SA0624 721031 - 721747 + | hypothetical protein SA0625 722032 - 722220 + | hypothetical protein TERM 685 722231 - 722273 + F 100 -9.4 -5.09685 | AATAAAAATGATCAA TGAAGTGGTTTGAAGGTT GTTAATA AACCTTTGAGTCACTTCA TTTTTATATGTATTC SA0626 722573 - 723217 + | hypothetical protein TERM 686 723510 - 723492 - f 83 -2.4 -5.89921 | ATCAGAACAAAAAAA CAATTGAT TAC AACAACTG AAGGAACAATGATTA TERM 687 723806 - 723820 + G 84 -5.8 -5.26119 | TAACACACATTTATT TAATGA TGA TCATTA TTTTATTTTTCCAAA SA0627 723519 - 724199 + | hypothetical protein TERM 688 724316 - 724286 - f 82 -7.7 -4.44797 | gap 1 GCACCAACAGCAAAA GAGCCCCTAATTAA TAAA TTAAA-AGGGGCTC TAAGAAGCGGGGTTA TERM 689 724773 - 724792 + G 80 -5 -5.33405 | CCAACACAGTATTAC GTTCAATG TTCT CATTGGGC TTTTTATTTGGTCCA SA0628 724337 - 725551 + | hypothetical protein TERM 690 725973 - 726006 + G 75 -6.9 -4.09519 | opp_overlap 725981, overlap 725978 AACAAGTAGTATAGC TCAAGCAATCATTAT GTTT ATAATGATTGTATGG TTCTTTATAGATGCT TERM 691 725978 - 726001 + G 77 -9.8 -3.08696 | opp_overlap 725981, overlap 725973 GTAGTATAGCTCAAG CAATCATTAT GTTT ATAATGATTG TATGGTTCTTTATAG SA0629 725548 - 726036 + | hypothetical protein SA0630 726824 - 726135 - | hypothetical protein TERM 692 726310 - 726294 - G 71 -3 -5.09685 | overlap 726286 726296 GAATACATAGAAAAA TCCTAC AATTA GTAGAA TGATTGCTAAATAGG SA0631 726951 - 727394 + | hypothetical protein SA0632 727461 - 727856 + | hypothetical protein SA0633 727994 - 728293 + | hypothetical protein TERM 693 728308 - 728337 + F 78 -4.4 -5.4505 | overlap 728320 AACTGCTATCTAAAA CGCAAAGTTGAT CAAAAT ATCGATTTTGTG TTTTTTATTGAGAAA SA0634 728373 - 728915 + | hypothetical protein TERM 694 728934 - 728991 + T 100 -11.8 -5.09426 | opp_overlap 728941, overlap 728937 ATTTATACATAATCG T-AACAAACACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTGTTTGTTTA TTTTTTAACCTTAGA TERM 695 728937 - 728987 + T 100 -15.1 -5.05153 | gap 1, opp_overlap 728941, overlap 728934 TATACATAATCGTAA CAAACACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTGTTTG TTTATTTTTTAACCT TERM 696 728983 - 728941 - T 100 -12.3 -4.21989 | gap 1, opp_overlap 728937 728934 CATAATCGTAACAAA CACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTG TTTGTTTATTTTTTA SA0635 729577 - 729011 - | hypothetical protein TERM 697 729187 - 729167 - G 83 -6.9 -4.66609 | opp_overlap 729152 TAGTGGATTGAAAAA GCCATTAAT ATT ATAAATGGC AATAGGCTTTTCATG SA0636 730037 - 729579 - | hypothetical protein TERM 698 730011 - 729962 - G 100 -11.7 -4.8543 | gap 1 TAATTGTCACAAAAA TGCCTGTCTCAGTTGTTAAATCTA TAA TAGAATCAACAACAG-GACAAGCA TCTCCATCAATAATA SA0637 730723 - 730040 - | hypothetical protein TERM 699 730875 - 730846 - R 90 -8 -5.31072 | opp_overlap 730846 AGAAGACAATAAAAA CTGCCAATCAAG TGGTTC CTTAATTGACAG TCTATATTTTAAAAG uppP 731770 - 730895 - | undecaprenyl pyrophosphate phosphatase TERM 700 732526 - 732510 - g 73 -3.8 -5.11613 | overlap 732515 AGATGAGTCAAAAAA TCAAAT GACTT ATTTGA ATCAATTTAGTCAAC SA0639 731989 - 733620 + | hypothetical protein SA0640 733617 - 735290 + | hypothetical protein TERM 701 735327 - 735296 - T 100 -12.4 -5.66684 | opp_overlap 735296 TAATGCATAAAAAAA CTGCTTGATAGGCT AAGA AACCTTTCAAGCAG TTTTTTAACTAACAA TERM 702 735296 - 735327 + T 100 -10.2 -5.08824 | opp_overlap 735296 TAATGCATAAAAAAA CTGCTTGATAGGCT AAGA AACCTTTCAAGCAG TTTTTTAACTAACAA SA0641 735860 - 735417 - | hypothetical protein TERM 703 736775 - 736791 + G 74 -5.9 -4.52803 | ACACGTTTACAGGTC CGATTGA TCG TCAATTG TTTTATCAATTTATA SA0642 736087 - 737013 + | hypothetical protein SA0643 737116 - 738024 + | hypothetical protein SA0644 738059 - 738346 + | hypothetical protein TERM 704 738377 - 738357 - f 77 -5.5 -4.93696 | opp_overlap 738357, overlap 738337 TTTAAATATTAAAAA GAGACTATC TAC AATAATCTC ATTTGCATTTTATCT TERM 705 738659 - 738644 - g 71 -3.3 -5.19328 | ATGTCAGAAGAAAAA CATGT AGTGGA ACATG AACAACAAAAGAAAG TERM 706 739015 - 739042 + G 78 -7 -4.4521 | overlap 739017 TAGTGGATATGCAAC TTCAGCTGTAGC TCTC GTTGCAGCTGCA TTATTTTTGGCTGCT TERM 707 739017 - 739040 + G 75 -9.6 -2.54902 | overlap 739015 GTGGATATGCAACTT CAGCTGTAGC TCTC GTTGCAGCTG CATTATTTTTGGCTG SA0645 738629 - 740182 + | hypothetical protein SA0646 740268 - 741641 + | hypothetical protein TERM 708 741751 - 741712 - T 81 -8.1 -4.2772 | opp_overlap 741715, overlap 741715 CTTAAGCAATATAAA TAAGCCAATTTCTATTA TTGATG TGATAGAAATTGGCTTT CCTCAAATATATAAG TERM 709 741715 - 741748 + T 100 -12.7 -3.75933 | opp_overlap 741712 741715 AAGCAATATAAATAA GCCAATTTCTATTAT TGAT GTGATAGAAATTGGC TTTCCTCAAATATAT TERM 710 741748 - 741715 - T 91 -9.8 -4.24283 | opp_overlap 741715, overlap 741712 AAGCAATATAAATAA GCCAATTTCTATTA TTGATG TGATAGAAATTGGC TTTCCTCAAATATAT SA0647 742080 - 741796 - | hypothetical protein SA0648 742697 - 742077 - | hypothetical protein SA0649 743302 - 742880 - | hypothetical protein norA 743511 - 744677 + | quinolone resistance protein TERM 711 744681 - 744671 - f 70 -4 -5.011 | ATTGAAAGAACAAAA TATG TAG CATA AGTATTTTGGTGTAT TERM 712 745157 - 745139 - g 74 -3.2 -5.35224 | opp_overlap 745143, overlap 745134 CTTATAAAAAGAAAA TGGATATT CTC AATATTCA TACTGCTAAAGCATC SA0651 744970 - 745422 + | hypothetical protein TERM 713 745432 - 745456 + F 85 -5.8 -5.46706 | AAATAATAGATGGAA CAGTGTATTC TAATT GGATATACTG TTTTTATTTTGCAAT SA0652 745596 - 746078 + | hypothetical protein TERM 714 746163 - 746108 - f 100 -16.4 -3.03619 | opp_overlap 746111, overlap 746111 746131 AAGTATGGGGCAAGA TTAGGAGTGTGGCAGAGATGAAATTT TTAT AAAATTCATTTCTGCCACACTCCTTT TTGATTGAATTAGCA TERM 715 746111 - 746160 + F 100 -24.7 -4.90013 | opp_overlap 746108 746111 746131 TATGGGGCAAGATTA GGAGTGTGGCAGAGATGAAATTT TTAT AAAATTCATTTCTGCCACACTCC TTTTTGATTGAATTA TERM 716 746160 - 746111 - f 100 -22.5 -2.74192 | opp_overlap 746111, overlap 746108 746131 TATGGGGCAAGATTA GGAGTGTGGCAGAGATGAAATTT TTAT AAAATTCATTTCTGCCACACTCC TTTTTGATTGAATTA SA0653 746331 - 747092 + | hypothetical protein TERM 717 747121 - 747131 + G 71 -5.4 -4.60889 | overlap 747129 TTTCAATCCTTCAAT TGAC TAT GTCA TTTTTACGAATGATT fruB 747089 - 748009 + | fructose 1-phosphate kinase fruA 748015 - 749973 + | fructose specific permease TERM 718 750089 - 750130 + F 88 -5.5 -5.63236 | gap 1 ACAAAGCTGTAAAAA CACTTTC-TATTAATTCA GTTTTTA TGAATTGATATGAAGGTG TTTTTATTTTTAGAT nagA 750281 - 751462 + | N-acetylglucosamine-6-phosphate deacetylase SA0657 751683 - 753032 + | hypothetical protein TERM 719 753045 - 753084 + F 95 -8.1 -5.47218 | opp_overlap 753048, overlap 753048 TAGATATTAATATAT AAACCAACTAAGAATGA TTTAAT TCATTTTTGGTTGGTTA TTTTTTTGACTAAAA TERM 720 753048 - 753081 + F 100 -9.8 -4.8236 | opp_overlap 753048, overlap 753045 ATATTAATATATAAA CCAACTAAGAATGA TTTAAT TCATTTTTGGTTGG TTATTTTTTTGACTA SA0658 753254 - 754093 + | hypothetical protein SA0659 754225 - 755208 + | hypothetical protein TERM 721 755210 - 755194 - T 71 -6.7 -3.96188 | AAGGATACCCATAAA GTTTATT CTA AATAAAC AAAAAAAGAAGCCCT TERM 722 755241 - 755218 - T 95 -7.4 -6.11392 | opp_overlap 755218 AAATAAACAAAAAAA GAAGCCCTCA TTAA TGGGAGCTTC TTTTTAGTCTTTGCA TERM 723 755218 - 755241 + T 85 -7.4 -4.93696 | opp_overlap 755218 AAATAAACAAAAAAA GAAGCCCTCA TTAA TGGGAGCTTC TTTTTAGTCTTTGCA saeS 756335 - 755280 - | histidine protein kinase saeR 757021 - 756335 - | response regulator SA0662 757178 - 756996 - | hypothetical protein SA0663 758252 - 757812 - | hypothetical protein TERM 724 758090 - 758102 + g 76 -4.1 -5.19275 | TTTTAGAACTGAATG TACCT GTT AGGTG TTTTGTTTTATCAGT TERM 725 758525 - 758470 - R 100 -16.7 -3.60214 | opp_overlap 758472 758480, overlap 758472 758480 ATCTGAACTAGATAA CACTATAAAACACTTCTGATATTTT GAACTA AGAATATCAGAAGTGTTTTATAGTT TTGGTATTAAAATTT TERM 726 758523 - 758472 - R 100 -19.3 -3.376 | opp_overlap 758472 758480, overlap 758470 758480 CTGAACTAGATAACA CTATAAAACACTTCTGATATTTT GAACTA AGAATATCAGAAGTGTTTTATAG TTTTGGTATTAAAAT TERM 727 758472 - 758523 + r 100 -21.5 -4.43012 | opp_overlap 758472 758470 758480, overlap 758480 CTGAACTAGATAACA CTATAAAACACTTCTGATATTTT GAACTA AGAATATCAGAAGTGTTTTATAG TTTTGGTATTAAAAT TERM 728 758515 - 758480 - R 100 -10.7 -4.56629 | opp_overlap 758472 758480, overlap 758472 758470 GATAACACTATAAAA CACTTCTGATATTTT GAACTA AGAATATCAGAAGTG TTTTATAGTTTTGGT TERM 729 758480 - 758515 + r 100 -12.9 -4.68539 | opp_overlap 758480 758472 758470, overlap 758472 GATAACACTATAAAA CACTTCTGATATTTT GAACTA AGAATATCAGAAGTG TTTTATAGTTTTGGT SA0664 759116 - 758532 - | hypothetical protein SA0665 759928 - 759215 - | hypothetical protein SA0666 760351 - 759932 - | hypothetical protein SA0667 761021 - 760353 - | hypothetical protein TERM 730 761129 - 761107 - H 93 -5.6 -6.14618 | TATAAAATAAAAAAA GCCTATCTCC ATA AAAGATAGAC GAAAGAAATGGGTTG SA0668 761372 - 761965 + | hypothetical protein SA0669 761949 - 763100 + | hypothetical protein SA0670 763100 - 763708 + | hypothetical protein SA0671 763774 - 763980 + | hypothetical protein SA0672 764068 - 764778 + | hypothetical protein SA0673 764762 - 765766 + | hypothetical protein SA0674 766240 - 768180 + | hypothetical protein TERM 731 768195 - 768221 + F 100 -14.6 -4.94147 | opp_overlap 768195 768191 768189 ATATTTAAACACGAA CTCGGATTGATA AAA TATCAATCCGGG TTTTATTATGTTCTT TERM 732 768221 - 768195 - f 100 -12.4 -3.47431 | opp_overlap 768195, overlap 768191 768189 ATATTTAAACACGAA CTCGGATTGATA AAA TATCAATCCGGG TTTTATTATGTTCTT SA0675 768456 - 770333 + | hypothetical protein TERM 733 771822 - 771812 - g 76 -4 -5.27477 | ACTTCAATTAAAAAA TTAC TCA GTAA TGAAGTAGAAGTATT recQ 770345 - 772126 + | DNA helicase TERM 734 772133 - 772164 + F 86 -5.3 -5.53288 | gap 1 AAAGTATAGTGAAGG CACCTAGT-AAGCA TTCCT TGTTTTACTGGGTG TTTTTTTGAATTCAA TERM 735 772747 - 772737 - g 74 -3.2 -5.36364 | overlap 772744 TGAAAAATATAAAAA CAGA AAA CCTG ATGAATTGTCAGGGG TERM 736 772760 - 772744 - g 73 -3.7 -5.02287 | overlap 772737 TATAAAAACAGAAAA CCTGA TGAATTG TCAGG GGGGCAACGACAACG SA0677 772348 - 773325 + | hypothetical protein TERM 737 774740 - 774726 - g 72 -2.9 -5.22137 | AACTAGAAAACAAAA TATCT GATGA AGATA TGCAAATGATGAACT SA0678 773318 - 774832 + | hypothetical protein TERM 738 774837 - 774885 + F 84 -9.1 -3.85256 | opp_overlap 774836 774840, overlap 774840 TAATCAAATAACGAC CAACGCCACATAAGATGCG TAACACCAAAT TATATCTTATGTGGCGTTG TTATATTTAAATCTA SA0679 775072 - 776130 + | hypothetical protein TERM 739 776272 - 776260 - f 90 -7.7 -5.1925 | opp_overlap 776259 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SA0680 776469 - 777011 + | hypothetical protein TERM 740 777167 - 777148 - T 76 -9.4 -3.09273 | opp_overlap 777152, overlap 777152 GGGCCCCAACATAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG TERM 741 777223 - 777204 - T 76 -9.4 -3.09273 | opp_overlap 777208, overlap 777208 GGGCCCCAACATAGA GAAATTGG AACG CCAATTTC TACAGACAATGCAAG TERM 742 777255 - 777238 - T 93 -11.3 -3.27907 | overlap 777233 CTACAGACAATGCAA GTTGGGG TGGG CCCCAAC ATAAAGAAATACTTT TERM 743 777368 - 777380 + T 90 -7.7 -5.1925 | opp_overlap 777367 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG TERM 744 777445 - 777426 - T 76 -9.4 -3.09273 | opp_overlap 777430, overlap 777430 GGGCCCCAACACAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG TERM 745 777683 - 777641 - T 74 -7.3 -3.99324 | gap 2, opp_overlap 777641 TCTCATTATTATAAA TCGGATGAATGTGTTAATCTA TGG CAGATT-ACACGT-CATCCGA TTTTTTATAGAATTT TERM 746 777641 - 777683 + T 100 -8.8 -5.28826 | gap 2, opp_overlap 777641 TCTCATTATTATAAA TCGGATGAATGTGTTAATCT ATGGC AGATTA-CACGT-CATCCGA TTTTTTATAGAATTT SA0681 778807 - 777890 - | hypothetical protein TERM 747 779028 - 779053 + r 100 -9.1 -5.15969 | opp_overlap 779028 AAACCTATAAAAAAA CAGTAAGCCAT TTAA ATGACTTACTG TTTTTTGAATTAGGC TERM 748 779053 - 779028 - R 100 -11.3 -5.68039 | opp_overlap 779028 AAACCTATAAAAAAA CAGTAAGCCAT TTAA ATGACTTACTG TTTTTTGAATTAGGC SA0682 780582 - 779077 - | hypothetical protein TERM 749 780692 - 780682 - R 85 -2.6 -5.89659 | opp_overlap 780682 ACAAAAAAATAAAAA TATT GAG AATA TTCTGTTATTAAGCG TERM 750 780869 - 780905 + r 100 -12.6 -4.21974 | gap 1, opp_overlap 780869 ATGCTAAATGAAAAA CACACCAATAAGTTAGG AAAA TC-AACTTATTGGTGTG TTTATTAAATGATAC TERM 751 780905 - 780869 - R 100 -13.3 -4.99134 | opp_overlap 780869 ATGCTAAATGAAAAA CACACCAATAAGTTA GGAAAAT CAACTTATTGGTGTG TTTATTAAATGATAC SA0683 781423 - 780923 - | 7-cyano-7-deazaguanine reductase SA0684 782309 - 781443 - | hypothetical protein TERM 752 782748 - 782761 + H 70 -5.3 -4.53303 | opp_overlap 782746 782748 GTGAAACGAAAAAGA CACAA TATC TTGTG TTTTGTATGCAAATG TERM 753 782940 - 782997 + H 100 -13.3 -2.6953 | gap 1, opp_overlap 782939 782940, overlap 782940 TTCAACCCATATAAG CTACT-ATTTTCTCAAATATAAATCTAT GCA ATTGGTTTACATTTGAGAAAATAAGTAG CTTCATTATAGTTAA TERM 754 782997 - 782940 - H 100 -13.3 -2.72739 | gap 1, opp_overlap 782940 782940, overlap 782939 TTCAACCCATATAAG CTACT-ATTTTCTCAAATATAAATCTAT GCA ATTGGTTTACATTTGAGAAAATAAGTAG CTTCATTATAGTTAA nrdI 783110 - 783508 + | ribonucleotide reductase stimulatory protein nrdE 783420 - 785576 + | ribonucleotide-diphosphate reductase subunit alpha TERM 755 785640 - 785601 - f 77 -7.4 -4.208 | gap 1, opp_overlap 785595, overlap 785595 785604 GTTGAAAATGACAAA CAG-CTAATCATCTGGT CTGAATT AGCAGATGATTAGACTG CTATGTCTGTATTTG nrdF 785694 - 786665 + | ribonucleotide-diphosphate reductase subunit beta SA0688 787040 - 788011 + | hypothetical protein SA0689 787998 - 788954 + | hypothetical protein SA0690 788951 - 789712 + | hypothetical protein TERM 756 790797 - 790760 - g 73 -8.1 -3.63901 | gap 1, opp_overlap 790764, overlap 790758 790764 790772 AGCAATTAAAGAAGA CAAAGTA-TATAATTTAG ATC CTAAATTATGGTACTTTG CAGCTGGATCAACTA SA0691 789831 - 790859 + | hypothetical protein TERM 757 790863 - 790913 + T 100 -16.5 -3.53091 | opp_overlap 790868, overlap 790868 GTTGTAAAATAATTT TAAAAGAGGGGAACAATGGTTAA AGGTC TTAATCATTGCTCCCCTCTTTTC TTTAAAAAAGGAAAT TERM 758 790868 - 790908 + T 100 -16.4 -4.86731 | opp_overlap 790868, overlap 790863 AAAATAATTTTAAAA GAGGGGAACAATGGTTAA AGGTC TTAATCATTGCTCCCCTC TTTTCTTTAAAAAAG TERM 759 790908 - 790868 - T 100 -17.1 -4.26634 | opp_overlap 790868 790863 AAAATAATTTTAAAA GAGGGGAACAATGGTTAAA GGT CTTAATCATTGCTCCCCTC TTTTCTTTAAAAAAG SA0692 791490 - 791176 - | hypothetical protein SA0693 792431 - 791508 - | hypothetical protein SA0694 793076 - 792558 - | hypothetical protein TERM 760 793215 - 793229 + G 84 -6.4 -5.02323 | AAAAAATTGTTATTA TCGCTG TTT TAGCGA TTTTATTTGTAGTAA SA0695 793196 - 794074 + | hypothetical protein TERM 761 794087 - 794107 + F 70 -6.3 -4.0616 | opp_overlap 794066 TAACTATAATCATTT TTCAAAGTT AAA AATTTTGAA TTTATGGTTAACATG TERM 762 794306 - 794285 - g 70 -4.6 -4.7261 | ATTGAGGAAAATAAA TATGTTTT TGTATT AAAACATA GTGAAACTTGTCCAA SA0696 794228 - 794548 + | hypothetical protein SA0697 794972 - 796096 + | hypothetical protein TERM 763 796233 - 796202 - T 100 -10.3 -5.04265 | opp_overlap 796202 AAAAAATATGAAAAA TCACGCTATCATT GCACTG AATGTTAGCGTGA TTTTTTTATTAATTA TERM 764 796202 - 796233 + T 100 -10.3 -5.87996 | opp_overlap 796202 AAAAAATATGAAAAA TCACGCTATCATT GCACTG AATGTTAGCGTGA TTTTTTTATTAATTA pepT 797509 - 796283 - | peptidase T TERM 765 796614 - 796630 + g 81 -8.1 -4.1673 | opp_overlap 796627 GCATTGATATCGTCA CGTATTT CTA AAATACG TTTCTTACGCAATTC TERM 766 796640 - 796651 + g 74 -3 -5.32882 | opp_overlap 796627 AATACGTTTCTTACG CAAT TCGA ATTG TTTTTTATCATGATC SA0699 798017 - 797523 - | hypothetical protein SA0700 798796 - 798035 - | hypothetical protein TERM 767 798929 - 798980 + r 100 -10 -4.6265 | gap 1, opp_overlap 798929 TTTAAATAAGAAAAA CTGTTAATC-TTTGCTATTAT ACTATGATTTA ATAATAGCAAAGGATTAACAG TTTTGTCGTTGTTAT TERM 768 798980 - 798929 - R 100 -10 -5.38549 | gap 1, opp_overlap 798929 TTTAAATAAGAAAAA CTGTTAATC-TTTGCTATTAT ACTATGATTTA ATAATAGCAAAGGATTAACAG TTTTGTCGTTGTTAT SA0701 800062 - 798992 - | hypothetical protein TERM 769 800097 - 800116 + H 77 -8 -4.11938 | ATTGACCACTAGCTA TTGTAAGT GAAA ACTTACAA TTTGTCATTAGTTTA llm 800380 - 801435 + | lipophilic protein affecting lysis rate and methicillin resistance level SA0703 802241 - 801600 - | hypothetical protein SA0704 802385 - 803251 + | hypothetical protein SA0705 803795 - 804697 + | hypothetical protein SA0706 804690 - 805364 + | hypothetical protein SA0707 805425 - 805997 + | hypothetical protein TERM 770 806033 - 806010 - f 90 -11.1 -3.70505 | opp_overlap 806010, overlap 806031 TAAATTAAGTTTAAA GCACTTGTG TTTTTG CACAAGTGC TTTTTTATACTCCAA TERM 771 806010 - 806033 + F 100 -11.8 -5.31275 | opp_overlap 806010 806031 TAAATTAAGTTTAAA GCACTTGTGT TTTT GCACAAGTGC TTTTTTATACTCCAA TERM 772 808204 - 808178 - g 70 -3.6 -4.94902 | GAATCAGCACAAAAA CGTGTAGAAGGT AAT AACTTCGACGCG CGTAAACGTATCTTA secA 806411 - 808942 + | preprotein translocase subunit SecA TERM 773 810223 - 810207 - g 76 -4.4 -5.05606 | overlap 810209 GCGAACAAAAAGAAA TCGGCT GGGGA AGCCAA ATTAGATCATATGTT prfB 809375 - 810367 + | peptide chain release factor 2 TERM 774 810375 - 810411 + F 90 -7.3 -5.42259 | opp_overlap 810374 810382, overlap 810382 ACGATTAATATATAT TTTAAAACCGAGGCTCT AAA AGGGCGTCGGTTTTTGG TTTTTTTAAAGGTAG TERM 775 810382 - 810404 + F 100 -9.8 -5.31158 | opp_overlap 810374 810382, overlap 810375 ATATATATTTTAAAA CCGAGGCTCT AAA AGGGCGTCGG TTTTTGGTTTTTTTA TERM 776 810404 - 810382 - f 77 -7.6 -4.18802 | opp_overlap 810382 810375, overlap 810374 ATATATATTTTAAAA CCGAGGCTCT AAA AGGGCGTCGG TTTTTGGTTTTTTTA TERM 777 810787 - 810816 + G 74 -3.5 -5.22039 | opp_overlap 810787 810788, overlap 810788 CAAGATGAAAAAAAC TCTTACAGTGACG GTTT CGTCAGTGTTAGC TTTTTTAGCTTTAAA TERM 778 810788 - 810815 + G 70 -7 -3.72139 | opp_overlap 810788 810787, overlap 810787 AAGATGAAAAAAACT CTTACAGTGACG GTTT CGTCAGTGTTAG CTTTTTTAGCTTTAA TERM 779 811016 - 811026 + G 74 -6.8 -4.35327 | TATTCATACAATCCT GGTG TAA CACC TTTAATTTTTCCTGG TERM 780 811143 - 811129 - g 70 -4.2 -4.75776 | overlap 811142 AAGCCAAGCTAAAAA GGTAGT AAA ACAACC TGTACAACAAGCGTC SA0710 810776 - 811615 + | hypothetical protein TERM 781 811672 - 811638 - f 76 -10.1 -2.86349 | opp_overlap 811638, overlap 811635 ATCAAGACAAGACTA TCCTCTTAGCCTGTT TAAGT AACAGGTTGAGAGGA TTTTTTGGTATCATT TERM 782 811638 - 811672 + F 100 -14.5 -5.2422 | opp_overlap 811635 811638 ATCAAGACAAGACTA TCCTCTTAGCCTGTT TAAGT AACAGGTTGAGAGGA TTTTTTGGTATCATT SA0711 811789 - 812439 + | hypothetical protein SA0712 812436 - 812672 + | hypothetical protein TERM 783 812781 - 812807 + F 100 -8.9 -5.47159 | opp_overlap 812784 812787 CGATTTGATTTAAGG CAAGCATAGTT AGCAC AACTATGTTTG TTTTTCTTTGTTCGA uvrB 812935 - 814926 + | excinuclease ABC subunit B uvrA 814934 - 817780 + | exinuclease ABC subunit A TERM 784 817783 - 817829 + F 95 -11.9 -3.58162 | opp_overlap 817783 817789, overlap 817789 TGAAGATAAATAAGA TTAAAAGAAGTGAAGGGTG TTGTAAATT TACCCTTCACTTCTTTTTA TTAATTTAGTAATGA TERM 785 817829 - 817783 - f 93 -11.2 -3.70022 | opp_overlap 817783 817789, overlap 817789 TGAAGATAAATAAGA TTAAAAGAAGTGAAGGGT GTTGTAAATTT ACCCTTCACTTCTTTTTA TTAATTTAGTAATGA TERM 786 817789 - 817823 + F 100 -10.9 -5.24551 | opp_overlap 817789 817783, overlap 817783 TAAATAAGATTAAAA GAAGTGAAGGGTG TTGTAAATT TACCCTTCACTTC TTTTTATTAATTTAG TERM 787 817823 - 817789 - f 100 -10.2 -4.52347 | opp_overlap 817783 817789, overlap 817783 TAAATAAGATTAAAA GAAGTGAAGGGT GTTGTAAATTT ACCCTTCACTTC TTTTTATTAATTTAG TERM 788 818039 - 818019 - f 100 -12.7 -3.61527 | overlap 818015 ACTTAAAAATAGGAA TGCATGAGT GCA ACTCATGCA TAAGAAATACTAATT TERM 789 818079 - 818096 + F 93 -11.3 -3.35696 | overlap 818074 AAAGTATTTCTTTAT GTTGGGG CCCA CCCCAAC TTGCATTGTTTGTAG TERM 790 818166 - 818184 + F 70 -6.1 -4.1891 | CTTGCATTGCCTGTA GAATTTC TTTTC GAAATTC TTTATGTTGGGGCCC hprK 818444 - 819376 + | HPr kinase/phosphorylase lgt 819382 - 820221 + | prolipoprotein diacylglyceryl transferase SA0717 820229 - 820714 + | hypothetical protein TERM 791 821014 - 821040 + G 77 -8.8 -3.58176 | opp_overlap 821016 821021, overlap 821016 821021 ACATTGAAGTTAACG AACCAAACAAGG CAT TCTTGTTTGGTA TTAATTATGTTATTG TERM 792 821016 - 821038 + G 89 -11.4 -3.34812 | opp_overlap 821016 821021, overlap 821014 821021 ATTGAAGTTAACGAA CCAAACAAGG CAT TCTTGTTTGG TATTAATTATGTTAT TERM 793 821038 - 821016 - g 87 -10.7 -3.40788 | opp_overlap 821016 821014 821021, overlap 821021 ATTGAAGTTAACGAA CCAAACAAG GCATT CTTGTTTGG TATTAATTATGTTAT TERM 794 821144 - 821128 - g 74 -5.9 -4.49364 | opp_overlap 821129 821134 AAAGCGAAGAACAAA TTGAACT TGA AGCTCAA TTGTTTGTAGTTCAA SA0718 820722 - 822161 + | hypothetical protein trxB 822228 - 823163 + | thioredoxine reductase TERM 795 823159 - 823180 + F 78 -10.3 -2.50511 | opp_overlap 823159 823158, overlap 823158 823156 ATTTAAACGATCAAG CTTAATTCG AGGT CGAATTAAG ATGTTGAGTTGTAAG TERM 796 823180 - 823159 - f 78 -10.3 -2.59608 | opp_overlap 823158 823156 823159, overlap 823158 ATTTAAACGATCAAG CTTAATTCG AGGT CGAATTAAG ATGTTGAGTTGTAAG TERM 797 823474 - 823454 - f 81 -9.1 -3.61527 | overlap 823456 ACTTAAAAATAGGAA TACATGAGT AAA ACTCATGCA TAAGAAATACTAATT TERM 798 823472 - 823456 - f 78 -9.5 -3.37164 | overlap 823454 TTAAAAATAGGAATA CATGAGT AAA ACTCATG CATAAGAAATACTAA TERM 799 823628 - 823647 + F 78 -9.3 -3.27907 | TTCGAAATTCTCTTT GTTGGGG CCCACA CCCCAAC TTGCATTGTCTGTAG TERM 800 823662 - 823681 + F 76 -9.4 -3.09273 | opp_overlap 823666, overlap 823666 CTTGCATTGTCTGTA GAAATTGG AAAT CCAATTTC TCTGTGTTGGGGCCC TERM 801 823687 - 823706 + F 78 -9.3 -3.27907 | ATCCAATTTCTCTGT GTTGGGG CCCACA CCCCAAC TTGCATTGTCTGTAG TERM 802 823721 - 823740 + F 76 -9.4 -3.09273 | opp_overlap 823725, overlap 823725 CTTGCATTGTCTGTA GAAATTGG AAAT CCAATTTC TCTGTGTTGGGGCCC TERM 803 823804 - 823823 + F 78 -9.3 -3.27907 | TTCGAAATTCTCTGT GTTGGGG CCCACA CCCCAAC TTGCATTGTCTGTAG TERM 804 823838 - 823857 + F 76 -9.4 -3.09273 | opp_overlap 823842, overlap 823842 CTTGCATTGTCTGTA GAAATTGG AAAT CCAATTTC TCTGTGTTGGGGCCC TERM 805 823904 - 823892 - f 90 -7.7 -5.07567 | opp_overlap 823891 CTAGAGTTGAAAAAA GCTTG TTG CAAGC GCATTTTCATTCAGT TERM 806 824159 - 824181 + G 78 -7.8 -4.08689 | opp_overlap 824159 CTATTAGTTGTAACA GGTTTATCTG GAG CAGGTAAATC TTTGGTTATTCAATG TERM 807 824188 - 824214 + G 70 -3.8 -4.99035 | AGGTAAATCTTTGGT TATTCAATGTTT AGA AGACATGGGATA TTTTTGTGTAGATAA SA0720 824108 - 825019 + | hypothetical protein SA0721 825016 - 826011 + | hypothetical protein SA0722 826122 - 827066 + | hypothetical protein TERM 808 827074 - 827105 + F 95 -8.2 -5.37345 | opp_overlap 827074 AATTATAAGTAAGAA GGTGTTTTTGGTAG TGAA TTATCAAAAATACC TTTTTTATGATTAAA TERM 809 827336 - 827315 - f 95 -10.2 -4.12857 | opp_overlap 827315 827318, overlap 827318 AATCAGCATAAATAA GAATCCCG ACTTTG CGGGATTC TCTGTATTGAAAAGT TERM 810 827315 - 827336 + F 81 -10.2 -3.09452 | opp_overlap 827315 827318, overlap 827318 AATCAGCATAAATAA GAATCCCG ACTTTG CGGGATTC TCTGTATTGAAAAGT TERM 811 827333 - 827318 - f 70 -6.1 -4.17309 | opp_overlap 827318 827315, overlap 827315 CAGCATAAATAAGAA TCCCG ACTTTG CGGGA TTCTCTGTATTGAAA TERM 812 827571 - 827557 - f 71 -7.2 -3.71794 | ATGTAACTATTTAAA GTCAAA GTG TTTGAC CAAATTTGACTTAAT clpP 827630 - 828217 + | hypothetical protein TERM 813 828250 - 828229 - T 75 -7.3 -4.11275 | opp_overlap 828229 ATAATTCAAAGTAAA GAGTAGACT AAGC AGTCTGCTC TTTTTGTATGAGTAA TERM 814 828229 - 828250 + T 100 -9.5 -4.99035 | opp_overlap 828229 ATAATTCAAAGTAAA GAGTAGACT AAGC AGTCTGCTC TTTTTGTATGAGTAA TERM 815 828342 - 828385 + T 93 -11.2 -3.22499 | opp_overlap 828343 828348 828368, overlap 828338 828343 828348 TTGAACCGTAACTAT ATGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCAA TCCTTTGTTTGTAAG TERM 816 828384 - 828343 - T 100 -16.9 -2.92246 | opp_overlap 828342 828338 828343 828348, overlap 828348 828368 TGAACCGTAACTATA TGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCA ATCCTTTGTTTGTAA TERM 817 828343 - 828384 + T 100 -14.7 -2.52776 | opp_overlap 828343 828348 828368, overlap 828342 828338 828348 TGAACCGTAACTATA TGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCA ATCCTTTGTTTGTAA TERM 818 828348 - 828379 + T 80 -8.8 -3.75898 | opp_overlap 828343 828348 828368, overlap 828343 828342 828338 CGTAACTATATGAAA TGTTCCCTTCAAAG TAGA CATTGAAAGGAACA TTTCAATCCTTTGTT TERM 819 828379 - 828348 - T 95 -11 -3.889 | opp_overlap 828348 828343 828342 828338, overlap 828343 828368 CGTAACTATATGAAA TGTTCCCTTCAAAG TAGA CATTGAAAGGAACA TTTCAATCCTTTGTT SA0724 829362 - 828460 - | hypothetical protein TERM 820 828605 - 828617 + g 73 -7.7 -3.75015 | opp_overlap 828605, overlap 828611 AGACGCATTGCAAGA CTTGG TGC CCAAG TTTCATGGGGCTTAT TERM 821 829603 - 829629 + H 100 -10.1 -5.56573 | overlap 829604 ACTCCCTTTAGTAGT GGACCCGTACG TTAAT CGTGCGGGTCG TTTTTATTTATTTCT TERM 822 829604 - 829628 + H 100 -13.6 -3.90284 | overlap 829603 CTCCCTTTAGTAGTG GACCCGTACG TTAAT CGTGCGGGTC GTTTTTATTTATTTC SA0725 830065 - 830694 + | hypothetical protein TERM 823 830922 - 830938 + F 72 -8 -3.68024 | TCCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 824 830978 - 830994 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 825 831034 - 831050 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 826 831090 - 831106 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCC GTCAGC TTCTGTGTTGGGGCC TERM 827 831169 - 831187 + F 81 -10.3 -3.20164 | TCCGCCAGCTTCTGT GTTGGGG CCCCA CCCCAAC TTGCATTGCCTGTAG TERM 828 831202 - 831221 + F 76 -9.4 -3.09273 | opp_overlap 831206, overlap 831206 CTTGCATTGCCTGTA GAAATTGG AAAT CCAATTTC TCTATGTTGGGGCCC TERM 829 831430 - 831409 - f 81 -5.9 -5.27476 | GCGAATAAAATAAAA CGTTTTGTT GAAT AACAAATCG AAAATGTATTGCAAG gapR 831619 - 832632 + | glycolytic operon regulator gap 832685 - 833695 + | glyceraldehyde-3-phosphate dehydrogenase TERM 830 833764 - 833794 + F 90 -8.4 -4.98522 | gap 1, opp_overlap 833755 833767 ATTAAAGCTTATGAG TAAGCGG-GGAGC ACAAAC GCTTCTCCGCTTA TTTTTATATAAAATT pgk 833834 - 835024 + | phosphoglycerate kinase tpi 835146 - 835907 + | triosephosphate isomerase pgm 835910 - 837427 + | phosphoglyceromutase eno 837557 - 838861 + | enolase TERM 831 838973 - 839000 + F 100 -9.2 -5.79595 | opp_overlap 838973 CGCTTGTATTTATAA CCTGCCACAG AGTTGAGA CTGTGGTAGG TTTTTTATTTTGAAG SA0732 839200 - 839658 + | hypothetical protein TERM 832 839875 - 839863 - g 82 -5.5 -5.27335 | opp_overlap 839863 TTCGGTAAACAAAAA CAACG TGG CGTCG ATTTATTCTTAAATA secG 839725 - 839958 + | preprotein translocase subunit SecG TERM 833 839960 - 839982 + F 88 -4 -5.73978 | ATCTTGGTATGTAAG GTCCGGCGAT GTA AATGTCGGGC TTTTTTATTTATAAT SA0734 840074 - 840814 + | hypothetical protein TERM 834 843019 - 843001 - g 83 -7.4 -4.65895 | GCCTTTACCTAAAAA TGACCGCT CAC AGCGACCA GCAAGAGGTAAAACG rnr 840848 - 843220 + | ribonuclease R smpB 843242 - 843706 + | SsrA-binding protein TERM 835 843751 - 843773 + F 74 -8.6 -3.23149 | overlap 843749 843748 843753 TGATATAGTTATATG TGCTTTTGTA AAT TACAAAAGTA TGATTTGTTTGATTT TERM 836 843753 - 843771 + F 73 -9 -3.1541 | overlap 843751 843749 843748 ATATAGTTATATGTG CTTTTGTA AAT TACAAAAG TATGATTTGTTTGAT TERM 837 844164 - 844188 + F 100 -10 -5.62045 | GTCTCCATATTTGTA GCCTACAACC TTTGT GGATGTAGGC TTTTTTATTATGTGT TERM 838 844488 - 844504 + F 70 -3.8 -5.10461 | TGGATAAATGGCTAC TGAAAA AGAAC TTTTCA TTTTTGTTACGTCAC SA0737 844543 - 844761 + | hypothetical protein TERM 839 844967 - 845010 + T 72 -8.4 -3.28265 | opp_overlap 844968, overlap 844965 844961 844968 844970 TTATAACTATAAAAA ATAGCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGCTAA TCTTAGTATGTTTAT TERM 840 844968 - 845009 + T 89 -11.9 -2.55874 | opp_overlap 844968, overlap 844967 844965 844961 844970 TATAACTATAAAAAA TAGCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGCTA ATCTTAGTATGTTTA TERM 841 845009 - 844968 - T 100 -16.3 -5.39755 | opp_overlap 844968 844967 844965 844961 844970 TATAACTATAAAAAA TAGCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGCTA ATCTTAGTATGTTTA TERM 842 844970 - 845007 + T 76 -10.1 -2.80437 | opp_overlap 844968, overlap 844968 844967 844965 844961 TAACTATAAAAAATA GCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGC TAATCTTAGTATGTT SA0738 845330 - 845028 - | hypothetical protein TERM 843 845139 - 845156 + g 91 -2.8 -6.01369 | TTCTCTAATGTTTTC CAATTT TGTTTT AAATTG TTTTTTTGTTATTTG SA0739 846433 - 845705 - | hypothetical protein TERM 844 846498 - 846475 - H 78 -6.8 -4.63184 | opp_overlap 846475 AATTTATTTTAAAAA CTCTAAATGA CTTA TCATTTTGAG TAATTAAACAAAGTT SA0740 847031 - 847552 + | hypothetical protein SA0741 847691 - 848221 + | hypothetical protein TERM 845 848537 - 848508 - g 89 -3.5 -5.84011 | opp_overlap 848526 848527 AAGAAAAAAGAAAAA CACGCAATTCG GAAAAAAT CGATTGGCGTG GCTTCAGTGCTTGTA clfA 848484 - 851453 + | fibrinogen-binding protein A, clumping factor TERM 846 851511 - 851494 - f 95 -11.3 -3.73914 | opp_overlap 851494 ATGATTCATGAAGAA GCCACCT TAAA AGGTGGC TTTTTTACTTGGATT TERM 847 851494 - 851511 + F 100 -11.3 -5.29385 | opp_overlap 851494 ATGATTCATGAAGAA GCCACCT TAAA AGGTGGC TTTTTTACTTGGATT SA0743 851674 - 853176 + | hypothetical protein TERM 848 853283 - 853318 + F 81 -5.7 -5.24449 | opp_overlap 853288, overlap 853286 CAATGATGCAATCTA GTA-TAGTCCACATTCT AAAC AGG-TGTGGACTATTAC TTTTTTCACTTTATA TERM 849 853286 - 853314 + F 76 -7.6 -3.95677 | gap 1, opp_overlap 853288, overlap 853283 TGATGCAATCTAGTA TAGTCCACATTCT AAAC AGG-TGTGGACTA TTACTTTTTTCACTT ssp 853529 - 854551 + | extracellular ECM and plasma binding protein TERM 850 854600 - 854632 + F 100 -8.6 -5.1361 | opp_overlap 854600 854604, overlap 854591 854628 ACCTATTATTTTAAA TATAGTCTACAATC TATGT GGTTGTAGGCTGTA TTTTTTGCAGTTTAT SA0745 854886 - 855407 + | hypothetical protein TERM 851 855538 - 855562 + F 76 -5 -5.0925 | TGTCTCGATATGATA GTCTGCAACG ATTCA TGTTGTAGGC TTTTTAATTTTACAA SA0746 855748 - 856434 + | staphylococcal nuclease TERM 852 856441 - 856478 + F 83 -7.9 -4.66163 | overlap 856449 GGTCAATAATGCTCA TTGTAAAAGTGTCACTG CTGC TAGTGGCCCTTTTATAA TTTTTAGATCACGAT cspC 856791 - 856991 + | cold-shock protein C TERM 853 856980 - 856998 + T 72 -7.6 -3.62046 | opp_overlap 856980 CAAGCTGCAAACGTA GTTAAAAT GTA ATTTTAAC TTATTCAAACAGTCC TERM 854 857008 - 857027 + T 93 -5.7 -5.75599 | opp_overlap 857008 TTTAACTTATTCAAA CAGTCCT TATTAT AGGGCTG TTTTTTTATGCTTTA TERM 855 857251 - 857200 - T 83 -3.4 -5.7946 | overlap 857201 TTTTGAATAAAAAAA GCGCCA-ATACAGAACTTTAAT AATGACGAGA ATTAAAG-TCTGTATATGGCGA TAACAAGAAGTAATG TERM 856 857250 - 857201 - T 72 -6.9 -4.06592 | overlap 857200 TTTGAATAAAAAAAG CGCCA-ATACAGAACTTTAAT AATGACGAGA ATTAAAG-TCTGTATATGGCG ATAACAAGAAGTAAT TERM 857 857289 - 857265 - T 81 -9.5 -3.63862 | overlap 857261 GATAACAAGAAGTAA TGTTAAACACT CAA AATGTTTAACA ATAATAGGATACCAC SA0748 857701 - 857483 - | hypothetical protein SA0749 858047 - 857763 - | hypothetical protein SA0750 858704 - 858135 - | hypothetical protein TERM 858 858872 - 858840 - R 100 -15.8 -5.66229 | ATTAAGAATAAAAAA CAGTCTGAAACATC ATTGA GACGTTTCAGACTG GATATAAAATGAATT SAS018 859080 - 858892 - | hypothetical protein SAS019 859369 - 859109 - | hypothetical protein TERM 859 859632 - 859611 - H 100 -10.3 -5.60864 | opp_overlap 859611 CAGATATCAAAAAAA TGTGCAAAA TCAC TTTTGCACA TTTACAAATACTAGT TERM 860 859611 - 859632 + H 85 -10.3 -3.58522 | opp_overlap 859611 CAGATATCAAAAAAA TGTGCAAAA TCAC TTTTGCACA TTTACAAATACTAGT SA0751 859710 - 859913 + | hypothetical protein SA0752 860146 - 859910 - | hypothetical protein SAS020 860371 - 860952 + | hypothetical protein TERM 861 860999 - 860961 - T 100 -9.1 -4.73677 | gap 1, opp_overlap 860961 860973 TTTATAATAAATAAA GCGTTATAC-ATAGACAC AAGT ATGTCTTTTGTATAACGC TTTTAAAATACAACT TERM 862 860961 - 860999 + T 81 -8.4 -4.13945 | gap 1, opp_overlap 860961, overlap 860973 TTTATAATAAATAAA GCGTTATAC-ATAGACA CAAGTA TGTCTTTTGTATAACGC TTTTAAAATACAACT SA0753 861642 - 861025 - | hypothetical protein TERM 863 861735 - 861711 - R 100 -10.1 -5.69793 | opp_overlap 861714 ATATCAAATAAAAAA CAACTACTCAA TAG TAGAGTAGTTG TATGAAAAATAGAAC SA0754 862291 - 861797 - | hypothetical protein SAS021 862499 - 862549 + | hypothetical protein TERM 864 862633 - 862606 - T 95 -7.8 -5.49569 | opp_overlap 862606 862605, overlap 862609 CACGAATAGAAAAAA TAACCAACCAAA AATT TTTGGTTGGCAA ATTTGAATTTTATGT TERM 865 862630 - 862609 - T 100 -11.7 -4.80737 | opp_overlap 862606 862605, overlap 862606 GAATAGAAAAAATAA CCAACCAAA AATT TTTGGTTGG CAAATTTGAATTTTA SA0755 863112 - 862690 - | hypothetical protein SA0756 863260 - 863976 + | 3-dehydroquinate dehydratase SA0757 864059 - 864598 + | hypothetical protein SA0758 865069 - 864749 - | hypothetical protein SA0759 865213 - 865569 + | hypothetical protein SA0760 865727 - 866107 + | glycine cleavage system protein H TERM 866 866119 - 866141 + F 100 -11.4 -4.94262 | ATAATCACCGTGTAA CTCCTTAATC TAA GATTGAGGAG TTTATTTTTAGTCTG truncated-SA 866286 - 866906 + | hypothetical protein tnpA 867008 - 868093 + | transposase A for Tn554 tnpB 868090 - 869982 + | transposase B for Tn554 tnpC 869989 - 870366 + | transposase C for Tn554 ant(9) 870517 - 871299 + | O-nucleotidylltransferase(9) TERM 867 871377 - 871418 + T 75 -7.5 -4.10552 | gap 1, opp_overlap 871380 871384, overlap 871380 871384 AACAATTTTTGGGAA G-AATAAAGCGTCCTCTTGT GAA ATTAGAGAACGCTTTATTAC TTTAATTTAGTGAAA TERM 868 871414 - 871380 - T 81 -9.5 -3.61894 | opp_overlap 871380 871377 871384, overlap 871384 AATTTTTGGGAAGAA TAAAGCGTCCTCT TGTGAAATT AGAGAACGCTTTA TTACTTTAATTTAGT TERM 869 871380 - 871414 + T 81 -9.4 -3.66117 | opp_overlap 871380 871384, overlap 871377 871384 AATTTTTGGGAAGAA TAAAGCGTCCTCTTGT GAA ATTAGAGAACGCTTTA TTACTTTAATTTAGT TERM 870 871410 - 871384 - T 71 -5.9 -4.44667 | opp_overlap 871380 871377 871384, overlap 871380 TTTGGGAAGAATAAA GCGTCCTCT TGTGAAATT AGAGAACGC TTTATTACTTTAATT TERM 871 871384 - 871410 + T 71 -5.8 -4.42206 | opp_overlap 871384 871380, overlap 871380 871377 TTTGGGAAGAATAAA GCGTCCTCTTGT GAA ATTAGAGAACGC TTTATTACTTTAATT ermA 872156 - 871425 - | rRNA methylase TERM 872 872199 - 872237 + H 74 -9.2 -2.86315 | overlap 872198 872195 872224 TAACCTTCTCCTTAC TGGTTATAATGAAC TGACATTAAGC GTTCATTATAACCA ATTAATTTTGATTTG TERM 873 873209 - 873187 - g 82 -4.2 -5.45652 | ATTTGGAATAAAAAA TGCGATTAGA ATT TATAATCACA ACACATCTAAATCAT SA0767 872690 - 873352 + | hypothetical protein TERM 874 873486 - 873439 - f 76 -2.8 -5.57396 | opp_overlap 873443, overlap 873440 873442 873443 ACAATGAATAAAAAA TCAGCCTGTATCTTATGTTACT ATTA AGTAATTTAAGATACAGGTTTT ACTATTTTTGAAATA TERM 875 873483 - 873442 - f 76 -8.9 -3.51774 | opp_overlap 873443, overlap 873440 873439 873443 ATGAATAAAAAATCA GCCTGTATCTTATGTTACT ATTA AGTAATTTAAGATACAGGT TTTACTATTTTTGAA TERM 876 873443 - 873482 + F 100 -14.6 -4.60746 | opp_overlap 873443 873442 873440 873439 TGAATAAAAAATCAG CCTGTATCTTATGTTACT ATTA AGTAATTTAAGATACAGG TTTTACTATTTTTGA TERM 877 873482 - 873443 - f 100 -12.4 -2.69438 | opp_overlap 873443, overlap 873442 873440 873439 TGAATAAAAAATCAG CCTGTATCTTATGTTACT ATTA AGTAATTTAAGATACAGG TTTTACTATTTTTGA truncated-SA 873613 - 873876 + | hypothetical protein TERM 878 874026 - 874044 + F 81 -10.3 -3.20164 | ATCCAATTTCTCTTT GTTGGGG CCCAT CCCCAAC TTGCATTGCCTGTAG TERM 879 874124 - 874112 - f 90 -7.7 -5.1925 | opp_overlap 874111 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT TERM 880 874257 - 874237 - f 81 -9.1 -3.61527 | overlap 874239 ATTTAAAAATAGGAA TACATGAGT AAA ACTCATGCA TAAGAAATACTAATT TERM 881 874255 - 874239 - f 78 -9.5 -3.37164 | overlap 874237 TTAAAAATAGGAATA CATGAGT AAA ACTCATG CATAAGAAATACTAA SA0768 874673 - 875059 + | hypothetical protein SAS023 875052 - 875348 + | hypothetical protein TERM 882 875525 - 875560 + F 100 -8.5 -5.92399 | opp_overlap 875513 875507 875504, overlap 875513 875507 875504 AAACAATACTACTAT TGCTTTCTCAATTTT TCTATC GATATTGAGAAAGCA TTTTTTATTTTATTA SA0769 875598 - 876623 + | hypothetical protein SA0770 876616 - 877311 + | hypothetical protein SA0771 877329 - 878150 + | hypothetical protein TERM 883 878163 - 878187 + F 100 -9.3 -4.98531 | TAAATCATATTAATG GCTCAGTAACG TGA TGTTGCTGGGC TTTTTAATTTAAACA SA0772 878504 - 878698 + | hypothetical protein TERM 884 878732 - 878763 + T 100 -9.5 -5.0916 | AATACACTGCACATG CCACTTAGTCGGT ATAACC ATCGGCTAGGTGG TTTTTGTATTAAAAA SA0773 879783 - 878932 - | hypothetical protein SA0774 880111 - 880872 + | hypothetical protein SA0775 880970 - 882277 + | hypothetical protein SA0776 882392 - 883633 + | hypothetical protein SA0777 883623 - 884087 + | hypothetical protein SA0778 884238 - 885635 + | hypothetical protein TERM 885 885736 - 885709 - T 83 -10 -3.70446 | opp_overlap 885715, overlap 885715 TGATACTGAATATAA CAAAAAGCCACA TTAC TGTGGCTTTTTT TGTTTTATAACTAAA TERM 886 885730 - 885715 - T 100 -9 -5.29716 | opp_overlap 885715, overlap 885709 TGAATATAACAAAAA GCCACA TTAC TGTGGC TTTTTTTGTTTTATA TERM 887 885715 - 885730 + T 100 -9 -6.14618 | opp_overlap 885709 885715 TGAATATAACAAAAA GCCACA TTAC TGTGGC TTTTTTTGTTTTATA SA0779 886281 - 885967 - | hypothetical protein TERM 888 886177 - 886189 + g 74 -6.3 -4.28188 | opp_overlap 886176, overlap 886173 TAAGCTTCGACTAAG TGCAT AAT ATGCA TTTATATTATGACTA TERM 889 887634 - 887624 - g 76 -4 -5.2197 | GATAAAAAGGAAAAA GAAA AAC TTTC TCAACAGCAAATTCA SA0780 886646 - 887686 + | hypothetical protein SA0781 887700 - 888767 + | hypothetical protein SA0782 889152 - 890000 + | hypothetical protein SA0783 890013 - 890840 + | hypothetical protein SA0784 890867 - 892186 + | hypothetical protein TERM 890 893088 - 893056 - g 75 -4.9 -4.84642 | overlap 893057 GGTAAATTAAGAAAA GTGGCAATGGATAAA GGG TTTAAACATTGCCAA GCTGGACCTTTAGTA TERM 891 893087 - 893057 - g 72 -8.4 -3.497 | overlap 893056 GTAAATTAAGAAAAG TGGCAATGGATAAA GGG TTTAAACATTGCCA AGCTGGACCTTTAGT lipA 892270 - 893187 + | lipoyl synthase SA0786 893317 - 893700 + | hypothetical protein TERM 892 893805 - 893826 + F 82 -4.4 -5.52384 | overlap 893808 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 893 895222 - 895192 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC SA0787 893906 - 895225 + | IS1181 transposase SA0788 895565 - 895299 - | hypothetical protein SA0789 895663 - 896097 + | hypothetical protein SA0790 896097 - 896876 + | hypothetical protein SA0791 896909 - 897868 + | hypothetical protein TERM 894 897979 - 898008 + F 89 -9.5 -4.20806 | opp_overlap 897979, overlap 897983 AATTCAATAACATTA TAAACTCGTCATA TTAA TGTGATGAGTTTA TTTGATTTTGACGTA TERM 895 897983 - 898004 + F 73 -5.9 -4.67692 | opp_overlap 897979, overlap 897979 CAATAACATTATAAA CTCGTCATA TTAA TGTGATGAG TTTATTTGATTTTGA SA0792 898280 - 898432 + | hypothetical protein dltA 898448 - 899905 + | D-alanine--D-alanyl carrier protein ligase dltB 899902 - 901116 + | DltB membrane protein dltC 901134 - 901370 + | D-alanine--poly(phosphoribitol) ligase subunit 2 dltD 901367 - 902542 + | poly D-alanine transfer protein TERM 896 902596 - 902545 - T 87 -8.4 -4.78661 | gap 1, opp_overlap 902545 902551 ACCTAAAAATTAAAA TACAAATAGCACATA-ACTCAACGA TTT TGATTGAGCGTATGTGCTATTTTTA TATTTTAAATTTCAT TERM 897 902551 - 902590 + T 71 -3.1 -5.28983 | gap 2, opp_overlap 902545, overlap 902545 AAATTAAAATACAAA TAGCACATA-ACTCAA-CG ATTT TGATTGAGCGTATGTGCTA TTTTTATATTTTAAA TERM 898 902759 - 902719 - T 70 -3.7 -5.1287 | gap 3, opp_overlap 902719 TTGACAGCGAAAAAA GACAGGTAATAACTG-ATTA TAAA TAATTCAGT-ATT-CCTGTC TTTGTTGTTATTCAT SA0797 903047 - 902805 - | hypothetical protein TERM 899 903000 - 902985 - G 71 -3.2 -5.11063 | ATCACGTAATAAAAA TGGACG AAGA CGTTCA ATAACTTCTGCTACT SA0798 903163 - 903471 + | hypothetical protein TERM 900 903520 - 903489 - T 100 -8.9 -5.27206 | opp_overlap 903489 TACACATAACAAAAA GCAATGTCAGT AATAGTGTGA ACTGACATTGC TTTTTAATTTTAACC TERM 901 903489 - 903520 + T 100 -8.9 -5.0925 | opp_overlap 903489 TACACATAACAAAAA GCAATGTCAGT AATAGTGTGA ACTGACATTGC TTTTTAATTTTAACC SA0799 904594 - 903530 - | hypothetical protein SA0800 904911 - 905147 + | hypothetical protein TERM 902 905499 - 905485 - g 75 -8.6 -3.36327 | opp_overlap 905494, overlap 905494 GTAGTTCATTTAGAA CTGCAA AAG TTGCAG GTAATCCTGAAAATT SA0801 905160 - 905519 + | hypothetical protein TERM 903 905753 - 905714 - f 71 -7.4 -3.75629 | CATTTTTAATCGAAA TCAGGCTACGAAAAAATT AATT AATTTTTTCACAATCTGA CTGAATCTTGCTTGA SA0802 905973 - 907181 + | hypothetical protein TERM 904 907272 - 907220 - f 70 -5.7 -4.31065 | opp_overlap 907231 907235, overlap 907235 ACACATAAAATTAAA TTATTCATTTATAAAGTCCTTCAGT GTC ACTGAAGGGCTTTATTGTTGTACAA TTTGAAGTGAGTAAC TERM 905 907231 - 907261 + F 100 -16.4 -3.83262 | opp_overlap 907220 907235, overlap 907235 TAAATTATTCATTTA TAAAGTCCTTCAGT GTC ACTGAAGGGCTTTA TTGTTGTACAATTTG TERM 906 907235 - 907257 + F 100 -12.8 -4.51812 | opp_overlap 907235 907220, overlap 907231 TTATTCATTTATAAA GTCCTTCAGT GTC ACTGAAGGGC TTTATTGTTGTACAA TERM 907 907257 - 907235 - f 93 -10.6 -3.92869 | opp_overlap 907231 907235, overlap 907220 TTATTCATTTATAAA GTCCTTCAGT GTC ACTGAAGGGC TTTATTGTTGTACAA ampA 907312 - 908787 + | cytosol aminopeptidase SA0804 909198 - 910514 + | hypothetical protein SA0805 910533 - 910907 + | hypothetical protein TERM 908 910913 - 910957 + T 90 -7.4 -5.626 | gap 2, opp_overlap 910910 910913 910927 TTTAAAATAAAAGAA CTGCTAGCTGAAATGTTATGAG ATA TTCATAAC-TA-CGGCTAGCAG TTTTTTTATGCGCTA SA0806 912117 - 910963 - | hypothetical protein TERM 909 912286 - 912327 + r 100 -11.8 -4.54404 | opp_overlap 912286 AATGTCAAAAGAAAA CAGCAGTAAAATCATTCC TAATTT GGAATCATCTTACTGCTG TTTGTTGTTGATTTA TERM 910 912327 - 912286 - R 100 -14 -5.10163 | opp_overlap 912286 AATGTCAAAAGAAAA CAGCAGTAAAATCATTCC TAATTT GGAATCATCTTACTGCTG TTTGTTGTTGATTTA mnhG 912722 - 912366 - | putative monovalent cation/H+ antiporter subunit G TERM 911 912511 - 912497 - G 70 -7.2 -3.73234 | opp_overlap 912496 TAATTAATACAAAGA TAATCG CAA CGATTA ATTGCATATTTACAA mnhF 912993 - 912700 - | putative monovalent cation/H+ antiporter subunit F TERM 912 912887 - 912873 - G 75 -8.6 -3.39529 | TTAATTGAAGACCAA TCGCAT CTA ATGCGA CAACACGATCGGCAA mnhE 913472 - 912993 - | putative monovalent cation/H+ antiporter subunit E mnhD 914970 - 913474 - | putative monovalent cation/H+ antiporter subunit D mnhC 915304 - 914963 - | putative monovalent cation/H+ antiporter subunit C mnhB 915732 - 915304 - | putative monovalent cation/H+ antiporter subunit B mnhA 918130 - 915725 - | monovalent cation/H+ antiporter subunit A TERM 913 915754 - 915764 + g 80 -6.8 -4.72386 | TCACCTCGTTACCTT GCGT TTG ACGC TTTTTACGTAATTTA SA0814 918644 - 918261 - | hypothetical protein SA0815 918708 - 919301 + | hypothetical protein SA0816 919833 - 920093 + | hypothetical protein TERM 914 920204 - 920156 - f 100 -16.5 -2.62515 | opp_overlap 920161, overlap 920161 AAGTTTCTTAGACTA TAAAAGAGATTAGTATCTATTAA ATT TTATTAGATACTAATCTCTTTTT GTCTACGATAACGTA TERM 915 920199 - 920161 - f 100 -16.4 -4.50976 | opp_overlap 920161, overlap 920156 TCTTAGACTATAAAA GAGATTAGTATCTATTAA ATT TTATTAGATACTAATCTC TTTTTGTCTACGATA TERM 916 920161 - 920199 + F 100 -16.4 -4.9792 | opp_overlap 920161 920156 TCTTAGACTATAAAA GAGATTAGTATCTATTAA ATT TTATTAGATACTAATCTC TTTTTGTCTACGATA TERM 917 920761 - 920745 - g 76 -4.4 -5.20534 | gap 1, overlap 920747 AGCAATGAAGAAAAA CG-GTGC CAAA GCACTCG TACAAATACATCATG SA0817 920455 - 921582 + | hypothetical protein rocD 921890 - 923080 + | ornithine--oxo-acid transaminase gudB 923189 - 924433 + | NAD-specific glutamate dehydrogenase TERM 918 924452 - 924493 + T 100 -9.6 -5.07652 | opp_overlap 924456 ATTATCATATGTGAT TTAACGAGCTTGGGAC AGAAAACAAA GCCCTAAGCTCGTTAA TTTTATTTTAGCAGC TERM 919 924718 - 924674 - T 91 -8.7 -4.74132 | opp_overlap 924676, overlap 924676 ATAGTTGATCAAAAA GACAGCAGTAGGATAATTTCA ATT TGGAAATATCTTACTGCTGTT TTTTATAGTAATAGC TERM 920 924676 - 924716 + T 100 -15.7 -5.32882 | opp_overlap 924674 924676 AGTTGATCAAAAAGA CAGCAGTAGGATAATTTCA ATT TGGAAATATCTTACTGCTG TTTTTTATAGTAATA TERM 921 924716 - 924676 - T 100 -11.3 -3.98658 | opp_overlap 924676, overlap 924674 AGTTGATCAAAAAGA CAGCAGTAGGATAATTTCA ATT TGGAAATATCTTACTGCTG TTTTTTATAGTAATA glpQ 925699 - 924770 - | glycerophosphoryl diester phosphodiesterase TERM 922 925764 - 925782 + r 71 -4.6 -4.69559 | CTACAAAAACCTGCT TGTGAAAA CGC TTTACACA TTTCTTTTACAATTT TERM 923 925925 - 925891 - R 84 -8.8 -4.34947 | AAGAGAGCATTAAAA TACCCACAATGT AATTTTAATAG ACATTGTGGGTA GGTAGATTAACGTAT argH 927320 - 925941 - | argininosuccinate lyase argG 928515 - 927310 - | argininosuccinate synthase pgi 928866 - 930197 + | glucose-6-phosphate isomerase TERM 924 930269 - 930310 + F 100 -16.2 -5.42975 | opp_overlap 930265 930263 TTTAAAGCATATTTT CGAGGTTGTCATTACA AATGTAAAAA TGTAATGACAACCTCG TTTTTATTTATATGC TERM 925 930428 - 930451 + F 70 -5.4 -4.58308 | overlap 930430 TACTAGAGACTGATT TATTAGCATG ATTA CATGTTAATG TTTCTTTACTTAGTA SA0824 930522 - 931097 + | hypothetical protein spsA 931102 - 931626 + | type-I signal peptidase spsB 931642 - 932217 + | type-1 signal peptidase 1B TERM 926 932272 - 932229 - f 78 -6.9 -4.56883 | opp_overlap 932229 932234 TTAATATGAAACAAA TACAACATCGTTTGTCGGT TTTAAT ACTGATAAACGATGTTTTA TTTTGTTAGTACCAC TERM 927 932229 - 932272 + F 100 -11.3 -4.71426 | opp_overlap 932229, overlap 932234 TTAATATGAAACAAA TACAACATCGTTTGTCGGT TTTAAT ACTGATAAACGATGTTTTA TTTTGTTAGTACCAC TERM 928 932234 - 932267 + F 100 -11.2 -5.28831 | opp_overlap 932229, overlap 932229 ATGAAACAAATACAA CATCGTTTGTCGGT TTTAAT ACTGATAAACGATG TTTTATTTTGTTAGT SA0827 932377 - 935850 + | hypothetical protein SA0828 935854 - 939507 + | hypothetical protein SA0829 939673 - 940575 + | hypothetical protein TERM 929 940591 - 940618 + F 100 -9.3 -5.61689 | opp_overlap 940591 940590 TTATCATTTAAAAAG CTAACCAGTCT TTATAT AGATTGGTTAG TTTTTTCTTGCTTTT SA0830 940904 - 941293 + | hypothetical protein TERM 930 941315 - 941355 + T 100 -10.6 -5.32944 | gap 1, opp_overlap 941301 941314 941317 AGACATATAGTATAT GACATAAGG-CATGGACAA TTAT TAGTCCAAGACCTTATGTC TTTTTTGATTCTAAA TERM 931 941413 - 941391 - T 95 -7.1 -5.88197 | gap 1, overlap 941395 TTAAACATAAAAAAA GGACTGGATA GTAG TA-CCAGTCC AAAATAATTCTAACC TERM 932 941448 - 941463 + T 76 -6.2 -4.54343 | opp_overlap 941447 CAATTAAGATTAGAT TGAATC GCAT GATTCA TTTATTTAGCTTTGT cdr 942781 - 941465 - | coenzyme A disulfide reductase SA0832 943657 - 942833 - | hypothetical protein SA0833 943771 - 944079 + | hypothetical protein TERM 933 944101 - 944119 + T 73 -9 -3.11072 | opp_overlap 944104, overlap 944104 CGTGCATTGCCTGTA GAATTTCT TTT AGAAATTC TCTGTGTTGGGTCCC SAS024 944168 - 944076 - | hypothetical protein TERM 934 944175 - 944227 + H 79 -8 -4.28791 | gap 1, opp_overlap 944178, overlap 944178 ATAATTCATTGTGAA TAA-GCTCCCTTCAAAGTAGACATT GAAA AATGAAAATTTTGAAGGGAGCCTTA TTTATGTTCTAGGTT TERM 935 944178 - 944223 + H 91 -11.3 -3.13947 | opp_overlap 944178, overlap 944175 ATTCATTGTGAATAA GCTCCCTTCAAAGTAGACATT GAAA AATGAAAATTTTGAAGGGAGC CTTATTTATGTTCTA TERM 936 944223 - 944178 - H 81 -9.1 -3.63694 | opp_overlap 944178 944175 ATTCATTGTGAATAA GCTCCCTTCAAAGTAGACATT GAAA AATGAAAATTTTGAAGGGAGC CTTATTTATGTTCTA SA0834 944627 - 946441 + | hypothetical protein TERM 937 946457 - 946488 + F 100 -7.6 -5.7946 | gap 1, opp_overlap 946457 CATATGTTTAATAAG TCTAGTTAATGTGTA ACG TA-ACATTAGCTAGA TTTTTTTATTCAAAA TERM 938 947271 - 947240 - g 79 -5.3 -5.0925 | opp_overlap 947244 TCGTAAAACTAAAAA CAAC-CCTGTGCTCA TTGG TGAAC-CAGGTGTTG GTAAAACTGCAATTG clpB 946644 - 949253 + | hypothetical protein TERM 939 949291 - 949261 - T 93 -11.3 -3.46236 | opp_overlap 949261, overlap 949256 ATGAATAAAATTGAA CCAAGAATGTGAT GATTA ATCGCATTCTTGG TTTTTTAGATTTGAA TERM 940 949261 - 949291 + T 100 -13.5 -5.22039 | opp_overlap 949261 949256 ATGAATAAAATTGAA CCAAGAATGTGAT GATTA ATCGCATTCTTGG TTTTTTAGATTTGAA SA0836 950181 - 949312 - | hypothetical protein TERM 941 949581 - 949616 + g 80 -7.1 -4.5478 | TTAAAATATTATTTT TAAGTGATGACCA ATATTCTGGA TGGTTATCACTTA TTATTTTGTATTTTT TERM 942 949909 - 949922 + g 74 -2.4 -5.53288 | opp_overlap 949906 GACAACATTTAATTT CGAT TGAAAC ATCG TTTTTTTAAGTTGGA SA0837 950291 - 951436 + | hypothetical protein SA0838 951420 - 952061 + | hypothetical protein SA0839 952054 - 953175 + | hypothetical protein SA0840 953153 - 953668 + | hypothetical protein SA0841 953979 - 954413 + | hypothetical protein TERM 943 954478 - 954523 + T 90 -8.5 -4.94992 | opp_overlap 954477 GATTATAATATAATT GCCTTGATACAAAGATTAC TCGTAAAT GACATCTTTGTATTAAGGC TTTTTCTAAATTTAA TERM 944 954628 - 954609 - T 75 -4.2 -5.26119 | opp_overlap 954609, overlap 954604 TGGCCAAAAATAAAA GCCGCC TTTATCTG GGCAGC TTCAATAATAAGAAA SAS025 954855 - 954670 - | hypothetical protein TERM 945 955025 - 955005 - H 70 -5.5 -4.28361 | opp_overlap 955009 TTAAGCGCATTAAAA CCAATTTCA TAC TGAAATTTG ACGATAATAAAGCAT FabH 955150 - 956091 + | 3-oxoacyl-(acyl carrier protein) synthase III fab 956103 - 957347 + | 3-oxoacyl- synthase TERM 946 957357 - 957387 + T 95 -8.5 -5.61913 | opp_overlap 957357 GCATAATTATAAAAA TCTTCAGTAAC GTTGTTTTA GTTACTGAAGA TTTTTTCTGTTTCTT TERM 947 957387 - 957357 - T 93 -8.5 -5.01535 | opp_overlap 957357 GCATAATTATAAAAA TCTTCAGTAAC GTTGTTTTA GTTACTGAAGA TTTTTTCTGTTTCTT SA0844 957773 - 957402 - | hypothetical protein oppB 958016 - 958942 + | oligopeptide transport system permease protein SA0846 958942 - 960012 + | hypothetical protein oppD 960028 - 961110 + | hypothetical protein oppF 961100 - 962041 + | hypothetical protein SA0849 962060 - 963715 + | hypothetical protein TERM 948 963732 - 963753 + F 100 -10.9 -5.10767 | opp_overlap 963729 963732 ATGCTTTGTAAATTA GGCTGGAGA CATA TCTCCAGTC TTTTTGTGTTGGATA TERM 949 963753 - 963732 - f 72 -8.7 -2.90615 | opp_overlap 963732, overlap 963729 ATGCTTTGTAAATTA GGCTGGAGA CATA TCTCCAGTC TTTTTGTGTTGGATA TERM 950 964084 - 964098 + G 82 -7.8 -4.52897 | opp_overlap 964056 964084 964083 964086 ATGTAGCATTAACAG CACCGC CAA GTGGTG TTTATTCTTCGTTAT TERM 951 964944 - 964920 - g 71 -6.5 -4.2338 | opp_overlap 964920, overlap 964917 TATGAAGACAAAGAA TTACGTAAAGC AAT GCTTTATGCAA TTGATAGAGAAAAAT SA0850 963927 - 965642 + | hypothetical protein TERM 952 965651 - 965670 + F 91 -10 -4.04174 | opp_overlap 965651 AGCTTAGTAATGTAA CCTCGACG ATTT TGTCGAGG TTTACTTATATGGGG TERM 953 965670 - 965651 - f 76 -9.3 -3.20901 | opp_overlap 965651 AGCTTAGTAATGTAA CCTCGAC GATTTT GTCGAGG TTTACTTATATGGGG SA0851 965693 - 966679 + | hypothetical protein TERM 954 967134 - 967116 - g 71 -9 -3.14878 | overlap 967114 TGGCCTAAGTGAAGA TGCATATT ATA AATATGCA CATGAATTTTCAGGT appF 966682 - 967662 + | hypothetical protein oppB 967655 - 968617 + | oligopeptide transport system permease protein OppB SA0854 968629 - 969510 + | hypothetical protein TERM 955 969520 - 969545 + T 88 -7.6 -4.87008 | opp_overlap 969520 CGTTAAATAATAAAA GAGGCACTAG TTAATT CTAGTACCTC TTTATTTTATCTCTT TERM 956 969545 - 969520 - T 100 -9.8 -5.00196 | opp_overlap 969520 CGTTAAATAATAAAA GAGGCACTAG TTAATT CTAGTACCTC TTTATTTTATCTCTT trpS 970541 - 969552 - | tryptophanyl-tRNA synthetase TERM 957 970648 - 970658 + H 75 -4 -5.29782 | opp_overlap 970648 TTACTACTAACAAAG GATT AAT AATC TTTTTTATAAGTGTA spxA 970835 - 971230 + | transcriptional regulator Spx TERM 958 971275 - 971298 + F 100 -12.6 -5.48054 | opp_overlap 971279 TAAAAGATATGTCAA GCAACACTAT TTCT ATAGTGTTGC TTTTTTGGTTTTAAT SA0857 971601 - 972320 + | adaptor protein TERM 959 972368 - 972351 - f 76 -9.9 -2.87794 | opp_overlap 972351, overlap 972350 972353 AACGCACTATGAAAG GAGACTC TTTG GAGTCTC TTTTTTTATTGATTT TERM 960 972351 - 972368 + F 100 -9.9 -5.9003 | opp_overlap 972351 972350 972353 AACGCACTATGAAAG GAGACTC TTTG GAGTCTC TTTTTTTATTGATTT SA0858 972441 - 973427 + | hypothetical protein TERM 961 973711 - 973700 - g 71 -3 -5.05228 | ACTAAATTAGAAAAA GTAT ATGT ATAC GCGCACCTAAAACAA TERM 962 974707 - 974720 + G 77 -5.3 -4.87665 | CCAACCGTCAAATTC TAGTG ACTA CACTA TTTTTGTCGCTGAAG SA0859 973475 - 975283 + | hypothetical protein TERM 963 975454 - 975475 + T 100 -10.2 -5.86465 | ATCCCCTTTGTTTAG CGTCGTGT ATTCAG ACACGACG TTTTTTTATGTTCTT TERM 964 975698 - 975737 + T 70 -4.4 -4.88786 | gap 1, opp_overlap 975703, overlap 975703 AAATTAAGAGTCAGT AAAAAGACCTCGTTACATT TAT GGTGTA-CGAGGTCTTTAA TTTATTTATTTTGAT TERM 965 975703 - 975732 + T 84 -8.7 -4.30977 | gap 1, opp_overlap 975703, overlap 975698 AAGAGTCAGTAAAAA GACCTCGTTACATT TAT GGTGTA-CGAGGTC TTTAATTTATTTATT TERM 966 975732 - 975703 - T 82 -7.3 -4.76644 | gap 1, opp_overlap 975698 975703 AAGAGTCAGTAAAAA GACCTCGTTACA TTTATGG TGTA-CGAGGTC TTTAATTTATTTATT SA0860 976528 - 975743 - | hypothetical protein SA0861 976937 - 976572 - | hypothetical protein TERM 967 977057 - 977067 + r 78 -4 -5.4505 | TAATTTATATTGTTT GAAA GTG TTTC TTTTTTCTTGAAAAA SA0862 977634 - 977041 - | hypothetical protein SA0863 977820 - 978167 + | hypothetical protein SA0864 978184 - 978819 + | GTP pyrophosphokinase ppnK 978836 - 979645 + | inorganic polyphosphate/ATP-NAD kinase TERM 968 979724 - 979745 + G 100 -13.1 -4.09805 | opp_overlap 979721 979720 CTAAGAAGACAGTGA GCGCCATTA AAAA TAATGGCGC TTTAATTGTTAATGA SA0866 979642 - 980496 + | hypothetical protein TERM 969 981272 - 981291 + G 81 -8 -4.1585 | opp_overlap 981251 AGAACATTTGCTTGG TATCATCA CGAT TGATGATA TTTTAGACGTTATGG TERM 970 981480 - 981469 - g 71 -3 -5.07567 | GGAGATTTGAAAAAA CATT AGAA AATG TAGCGCTACTCGCAG SA0867 980517 - 981902 + | hypothetical protein SA0868 981912 - 983756 + | hypothetical protein fabI 984034 - 984804 + | enoyl-(acyl carrier protein) reductase TERM 971 984817 - 984850 + T 100 -9.1 -5.50313 | gap 1, opp_overlap 984817 984815, overlap 984844 TAATATCATTCAACA GCTTTGTTCACGTTAT CAT AT-ATGTGAGCAAAGC TTTTTTGCTTTTATA TERM 972 984931 - 984966 + T 100 -13.5 -2.81055 | opp_overlap 984931, overlap 984928 984926 984924 TTATGCACAAAAAAA TCTCCTCAAAAGCTG TAGTTT CAACTTTTGAGGAGA TAGTATCTTATATTC TERM 973 984966 - 984931 - T 100 -15.7 -5.64274 | opp_overlap 984931 984928 984926 984924 TTATGCACAAAAAAA TCTCCTCAAAAGCTG TAGTTT CAACTTTTGAGGAGA TAGTATCTTATATTC SA0870 986086 - 985001 - | hypothetical protein TERM 974 987892 - 987880 - g 80 -6.3 -4.74598 | opp_overlap 987879 987880 GAAATTCAAAAGAAA CGTTT AGG AAACG GTTATAATGCAGTTT SA0871 986491 - 987996 + | hypothetical protein SA0872 988141 - 988899 + | hypothetical protein SA0873 989093 - 989602 + | hypothetical protein TERM 975 989690 - 989647 - T 100 -18.7 -3.81146 | opp_overlap 989647 989652, overlap 989652 TGTTTGAATTAATAA GAAAATGGTCATTTTTATT GAATGT AATAAAAATGACCATTTTC TTTATTTTAAAATAC TERM 976 989647 - 989690 + T 100 -19.4 -4.67048 | opp_overlap 989647 989652, overlap 989652 TGTTTGAATTAATAA GAAAATGGTCATTTTTATTG AATG TAATAAAAATGACCATTTTC TTTATTTTAAAATAC TERM 977 989685 - 989652 - T 100 -12.8 -4.95167 | opp_overlap 989647 989652, overlap 989647 GAATTAATAAGAAAA TGGTCATTTTTATT GAATGT AATAAAAATGACCA TTTTCTTTATTTTAA TERM 978 989652 - 989685 + T 100 -13.5 -5.26247 | opp_overlap 989652 989647, overlap 989647 GAATTAATAAGAAAA TGGTCATTTTTATTG AATG TAATAAAAATGACCA TTTTCTTTATTTTAA SA0874 990905 - 989715 - | hypothetical protein TERM 979 990656 - 990667 + g 73 -4.4 -4.84017 | CTAAAATAAATCCAG TCGT TAAA ACGA TTTTTGTGCCGAATT SA0875 992058 - 990883 - | diacylglycerol glucosyltransferase murE 992491 - 993975 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase SAS026 993965 - 994216 + | hypothetical protein prfC 994216 - 995778 + | peptide chain release factor 3 TERM 980 996011 - 996038 + F 95 -8.5 -5.4182 | TAAATTGCTTAGTGA GACCTTTGCTA TTTATT TAGCATAGGTC TTTTTGTTTGTACTT SA0878 996080 - 996883 + | hypothetical protein TERM 981 996896 - 996925 + F 100 -10.2 -5.04222 | TAATTGATGTGAAGC GGACAATCTTAA TTTAGT TTAAGGTTGTCC TTTTTCATTTAATTG TERM 982 998088 - 998078 - g 73 -4 -5.16237 | opp_overlap 998070 AACTTGATGAAAAAA TTCA TGT TGAA GATAAACATAAACAA htrA 997117 - 999426 + | serine protease HtrA SA0880 999443 - 1000801 + | hypothetical protein TERM 983 1000809 - 1000855 + F 100 -11.3 -5.4387 | gap 1, opp_overlap 1000807 1000809 TAGGATAATATAATA GCAATCTAAGTT-TAGTTAATA TAGA TTTTAACTGGAACTTAGATTGC TTTTTTAGTTTGTAT TERM 984 1000855 - 1000809 - f 79 -9.1 -3.46859 | gap 1, opp_overlap 1000809, overlap 1000807 TAGGATAATATAATA GCAATCTAAGTT-TAGTTAATA TAGA TTTTAACTGGAACTTAGATTGC TTTTTTAGTTTGTAT SA0881 1000937 - 1002451 + | hypothetical protein TERM 985 1002527 - 1002498 - T 81 -6.5 -5.03945 | opp_overlap 1002498 CAACAAGTATAAAAA CCTTTCTTAGAGA AGAT TATCTAGGAAAGG TTTTTAGAATTTTAA TERM 986 1002498 - 1002527 + T 91 -8.7 -4.7416 | opp_overlap 1002498 CAACAAGTATAAAAA CCTTTCTTAGAGA AGAT TATCTAGGAAAGG TTTTTAGAATTTTAA TERM 987 1002624 - 1002599 - T 100 -13.5 -5.72053 | opp_overlap 1002606 TAAGTAAACAAAAAA GCTAAAATGGT ATAT ACCATTTTAGC AAGTAACGGAAACGG SA0882 1003507 - 1002938 - | hypothetical protein SA0883 1003717 - 1003935 + | hypothetical protein TERM 988 1003962 - 1004014 + T 79 -8.2 -3.93236 | opp_overlap 1003964 1003969, overlap 1003964 1003969 ATTCCATAACGCAAT C-ATAAAAGGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCCTTTAATCG TTTATGACATTAATC TERM 989 1003964 - 1004011 + T 83 -11 -3.02632 | gap 1, opp_overlap 1003964 1003969, overlap 1003962 1003969 TCCATAACGCAATCA TAAAAGGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCCTTTAA TCGTTTATGACATTA TERM 990 1004011 - 1003964 - T 82 -11 -2.80511 | gap 1, opp_overlap 1003964 1003962 1003969, overlap 1003969 TCCATAACGCAATCA TAAAAGGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCCTTTAA TCGTTTATGACATTA TERM 991 1004006 - 1003969 - T 100 -10.9 -4.56093 | gap 1, opp_overlap 1003964 1003962 1003969, overlap 1003964 AACGCAATCATAAAA GGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCC TTTAATCGTTTATGA TERM 992 1003969 - 1004006 + T 95 -10.9 -3.91197 | gap 1, opp_overlap 1003969 1003964, overlap 1003964 1003962 AACGCAATCATAAAA GGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCC TTTAATCGTTTATGA SA0884 1005002 - 1004016 - | hypothetical protein TERM 993 1005292 - 1005268 - g 95 -8.7 -5.00616 | opp_overlap 1005272 1005275 1005286 GTCGTGTTGAAAAAA TCAACGATAAC TCT GTTATTGTTGA CTTAACAATTATGGA SAS027 1005201 - 1005377 + | hypothetical protein SA0885 1005392 - 1005994 + | hypothetical protein TERM 994 1006031 - 1005999 - f 86 -9.4 -3.94 | opp_overlap 1005989 1005999, overlap 1006030 TTAATGCTTAAATAA GCTTTTCTTAGA CGTCTGTGT TCTAAGAAAAGC TTTTTGCTTTAGAAA TERM 995 1005999 - 1006031 + F 100 -9.4 -4.98531 | gap 1, opp_overlap 1005999 1006030, overlap 1005989 TTAATGCTTAAATAA GCTTTTCTTAG-ACG TCTG TGTTCTAAGAAAAGC TTTTTGCTTTAGAAA SAS028 1006203 - 1006364 + | hypothetical protein TERM 996 1006407 - 1006369 - f 78 -3.2 -5.5604 | TTAAGCAATAAAAAA TAACCATCATTTCAAAAC TTT GACATAGAATGATGGTTA AAGAAAATCTCATTT TERM 997 1006451 - 1006474 + F 100 -9.6 -4.93595 | TTAACGGGCTCATTA GGCGACATGT TCCT GCATGTCGTC TTTTTACATTTTTAT SAS029 1007021 - 1007293 + | hypothetical protein TERM 998 1007967 - 1007947 - g 93 -8.5 -4.66002 | overlap 1007957 CATTAAGAAAAATAA TTTTTGAAA ATT TTTCAAAAA AATGCACGTATTGGG SA0886 1007337 - 1009301 + | hypothetical protein SA0887 1009304 - 1009624 + | hypothetical protein SA0888 1009621 - 1010262 + | hypothetical protein TERM 999 1010335 - 1010279 - T 100 -11.2 -4.90471 | gap 1, opp_overlap 1010280 1010285, overlap 1010280 ATCCAAAAGATAAAA TTAAAAGCCAATCAATGGGAAATGTTG ACTT CAACA-CTCCGTTTGATTGGCTTTTAT AATGTGTTACTAAGT TERM 1000 1010280 - 1010334 + T 100 -12.5 -2.77148 | gap 1, opp_overlap 1010279 1010280, overlap 1010285 TCCAAAAGATAAAAT TAAAAGCCAATCAATGGGAAATGTTG ACTT CAACACT-CCGTTTGATTGGCTTTTA TAATGTGTTACTAAG TERM 1001 1010334 - 1010280 - T 100 -14.7 -3.52656 | gap 1, opp_overlap 1010280 1010285, overlap 1010279 TCCAAAAGATAAAAT TAAAAGCCAATCAATGGGAAATGTTG ACTT CAACA-CTCCGTTTGATTGGCTTTTA TAATGTGTTACTAAG TERM 1002 1010285 - 1010329 + T 83 -8 -4.5477 | gap 1, opp_overlap 1010280 1010279, overlap 1010280 AAGATAAAATTAAAA GCCAATCAATGGGAAATGTTG ACTT CAACACT-CCGTTTGATTGGC TTTTATAATGTGTTA SA0889 1010595 - 1010350 - | hypothetical protein TERM 1003 1010953 - 1010928 - R 100 -9.1 -5.38497 | opp_overlap 1010928 AGCTAAATGAAAAAA TCCTAGGTATT CATG AGTACCTAGGA TTTTTACGCATGATA TERM 1004 1010928 - 1010953 + r 100 -11.3 -4.60487 | opp_overlap 1010928 AGCTAAATGAAAAAA TCCTAGGTATT CATG AGTACCTAGGA TTTTTACGCATGATA TERM 1005 1010997 - 1010981 - R 100 -10.9 -5.77988 | ATATATACAAAAAAA GAGAGGA TAG TCCTCTC AAATAATAGTTAATA SA0890 1011363 - 1011007 - | hypothetical protein SA0891 1011851 - 1012810 + | hypothetical protein TERM 1006 1012852 - 1012814 - T 100 -11.8 -5.56372 | opp_overlap 1012814 AAAGCAAAATAAAAA TACAGCGCTACTCGTAAA TCA TATAAGAGTGGCGCTGTA TTTTTAATTATGTTT TERM 1007 1012814 - 1012852 + T 100 -14 -5.00412 | opp_overlap 1012814 AAAGCAAAATAAAAA TACAGCGCTACTCGTAAA TCA TATAAGAGTGGCGCTGTA TTTTTAATTATGTTT SA0892 1013266 - 1013051 - | hypothetical protein SA0893 1013431 - 1013982 + | hypothetical protein TERM 1008 1014018 - 1013988 - T 85 -2.6 -5.95539 | gap 1, opp_overlap 1013988, overlap 1013989 TGTTAAATAAAAAAA CTCGACAGTTCGA TGTAAG TCGAT-TGCCGAG TAGTATCATTTTCTA SA0894 1014972 - 1014034 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 1009 1015878 - 1015895 + G 88 -7.1 -5.07652 | opp_overlap 1015871, overlap 1015872 GTTATATATTCTTGT TAGAATC ACAA GATTCTA TTTTCTTTTCACAAA SA0895 1015154 - 1016515 + | hypothetical protein TERM 1010 1017651 - 1017637 - g 70 -4.3 -4.731 | AATTGATTAAGAAAA CATCT GAAAA AGATG CATTATTTATTAGTA menD 1016502 - 1018175 + | menaquinone biosynthesis protein TERM 1011 1018695 - 1018681 - g 77 -8.6 -3.58565 | overlap 1018675 CAAATAAGACTACAA CGATTG TCT CAATCG CCACAGAAAATGGCC SA0897 1018162 - 1018965 + | hypothetical protein menB 1018958 - 1019779 + | naphthoate synthase TERM 1012 1019802 - 1019836 + T 95 -6.5 -5.86976 | gap 1 TGAATATGATATTAA GTCACTTG-CGTCGTT TATT AGCGACGATAGGTGGC TTTTTTATTTTATAA TERM 1013 1019988 - 1019955 - T 100 -9.6 -5.33848 | opp_overlap 1019955 1019954 ATTACAATGAAAAAA CGAGCTGGTGAGAA ATTGAA TTCTCGCCAACCCG CTTTATGAAGTGAAA sspC 1020346 - 1020017 - | cysteine protease sspB 1021565 - 1020384 - | cysteine protease precursor TERM 1014 1020977 - 1020997 + g 71 -3.3 -5.18409 | overlap 1020968 1020978 ACTCTTGTTTCAATT TTGCTGAAA CTG TTTTAGCAC TTTCTTTTTCTTTTA TERM 1015 1021256 - 1021274 + g 77 -9 -3.65314 | CGTCTTTTATAACTG GATAATAG TAA CTATTATC TTCTTCACCATTAAA TERM 1016 1021357 - 1021394 + g 70 -4.3 -4.77757 | gap 1, overlap 1021359 CTTTGTTTATCTAAT GCTTTAGCATAACCAGCA AAT TGTT-GTTGTGCTAGATC TTTTACTTTTTGAGG sspA 1022675 - 1021647 - | serine protease; V8 protease; glutamyl endopeptidase TERM 1017 1022297 - 1022321 + g 70 -4.4 -4.67607 | gap 2, overlap 1022300 TTAAAGCATGAGGAT CACCGTGCGTAG CAT CTACG-ACG-TG TTTATTTGTTAAAAG TERM 1018 1022300 - 1022319 + g 73 -7.2 -3.94772 | gap 1, overlap 1022297 AAGCATGAGGATCAC CGTGCGTAG CAT CTACG-ACG TGTTTATTTGTTAAA TERM 1019 1022791 - 1022762 - R 83 -6.7 -5.13137 | TAAATAAATTAAAAA GTTTTTGTAAA GATTAGAG TTTACAAAAAC ATTAAGGTAATTAAA SA0902 1024357 - 1023203 - | hypothetical protein TERM 1020 1023310 - 1023287 - G 79 -8.2 -3.91072 | GGAAATCCTTACAAA TCCTTTACCG AATT CTGTAAAGGA TGAGCCTGGAACGAT SA0903 1025563 - 1024553 - | hypothetical protein TERM 1021 1025330 - 1025346 + g 70 -2.3 -5.28778 | overlap 1025332 1025339 TATCATATAAGGTAC TATCAAA CGT TTTGAAA TTTTTTCTAAATAGT SA0904 1025716 - 1026135 + | ATL autolysin transcription regulator TERM 1022 1026258 - 1026204 - T 100 -16.1 -3.55145 | opp_overlap 1026204 1026211, overlap 1026210 AATCATGAATTACAA GCAAAAGTAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTATTTTTGC TTGTGTATGTATAAA TERM 1023 1026204 - 1026258 + T 100 -18.3 -3.66896 | opp_overlap 1026204 1026210, overlap 1026211 AATCATGAATTACAA GCAAAAGTAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTATTTTTGC TTGTGTATGTATAAA TERM 1024 1026252 - 1026210 - T 83 -7.9 -4.52781 | opp_overlap 1026204 1026211, overlap 1026204 GAATTACAAGCAAAA GTAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTAT TTTTGCTTGTGTATG TERM 1025 1026211 - 1026251 + T 100 -11.4 -4.9755 | opp_overlap 1026210 1026204, overlap 1026204 AATTACAAGCAAAAG TAGCGGTGATTGTTAA AATTGATGG TAAACAATCACCGCTA TTTTTGCTTGTGTAT TERM 1026 1026274 - 1026331 + T 100 -16.5 -3.4382 | opp_overlap 1026277 1026278, overlap 1026276 1026278 1026287 TTGTGTATGTATAAA AAAGGGATCAAAGGTCATCCCCCATGA TTGA TAGTGGGGGATGACTTTTGATCCTATG TTCATGTTGCTTATT TERM 1027 1026276 - 1026329 + T 100 -19.1 -3.27602 | opp_overlap 1026277 1026278, overlap 1026274 1026278 1026287 GTGTATGTATAAAAA AGGGATCAAAGGTCATCCCCCATGA TTGA TAGTGGGGGATGACTTTTGATCCTA TGTTCATGTTGCTTA TERM 1028 1026328 - 1026277 - T 100 -16.1 -5.28176 | opp_overlap 1026276 1026274 1026278 1026287, overlap 1026278 TGTATGTATAAAAAA GGGATCAAAGGTCATCCCCCA TGATTGATAG TGGGGGATGACTTTTGATCCT ATGTTCATGTTGCTT TERM 1029 1026327 - 1026278 - T 100 -19.6 -3.76182 | opp_overlap 1026278 1026276 1026274 1026287, overlap 1026277 GTATGTATAAAAAAG GGATCAAAGGTCATCCCCCA TGATTGATAG TGGGGGATGACTTTTGATCC TATGTTCATGTTGCT TERM 1030 1026278 - 1026327 + T 100 -23.9 -3.1917 | opp_overlap 1026277 1026278, overlap 1026276 1026274 1026287 GTATGTATAAAAAAG GGATCAAAGGTCATCCCCCATGA TTGA TAGTGGGGGATGACTTTTGATCC TATGTTCATGTTGCT TERM 1031 1026287 - 1026318 + T 100 -13.8 -4.34947 | opp_overlap 1026278 1026277, overlap 1026278 1026276 1026274 AAAAAGGGATCAAAG GTCATCCCCCATGA TTGA TAGTGGGGGATGAC TTTTGATCCTATGTT atl 1030088 - 1026342 - | autolysin, N-acetylmuramyl-L-alanine amidase and endo-b-N-acetylglucosaminidas TERM 1032 1027987 - 1028015 + g 81 -7.5 -4.41956 | opp_overlap 1027981, overlap 1027990 TGTTTATAAGTGCCC CAAGGTACTGAAT ATA ATTTAGTGCCTGG TTTTACTGTATATGT SA0906 1030750 - 1030316 - | hypothetical protein TERM 1033 1030846 - 1030895 + r 100 -12.5 -3.84271 | opp_overlap 1030853 1030892, overlap 1030850 1030853 1030861 1030892 AAAAATAATTAGACA TAAAAAAGCTATAAAGATGATTC ACAA GAATCATCTTTATAGCTAATTAA TTATTAATGTTATAG TERM 1034 1030850 - 1030891 + r 100 -13.3 -3.57816 | opp_overlap 1030853, overlap 1030846 1030853 1030861 ATAATTAGACATAAA AAAGCTATAAAGATGATTC ACAA GAATCATCTTTATAGCTAA TTAATTATTAATGTT TERM 1035 1030888 - 1030853 - R 100 -19.4 -5.43414 | opp_overlap 1030850 1030846 1030853 1030861 ATTAGACATAAAAAA GCTATAAAGATGATTC ACAA GAATCATCTTTATAGC TAATTAATTATTAAT TERM 1036 1030853 - 1030888 + r 100 -19.4 -2.90373 | opp_overlap 1030853, overlap 1030850 1030846 1030861 ATTAGACATAAAAAA GCTATAAAGATGATTC ACAA GAATCATCTTTATAGC TAATTAATTATTAAT TERM 1037 1030861 - 1030880 + r 86 -9.4 -3.95153 | opp_overlap 1030853, overlap 1030853 1030850 1030846 TAAAAAAGCTATAAA GATGATTC ACAA GAATCATC TTTATAGCTAATTAA SA0907 1031375 - 1030905 - | hypothetical protein SA0908 1032640 - 1031423 - | hypothetical protein fmtA 1033091 - 1034284 + | FmtA, autolysis and methicillin resistant-related protein TERM 1038 1034793 - 1034770 - T 100 -14 -5.54338 | opp_overlap 1034765 1034773 GAAGGAAAATAAAAA CCAGCTAACA AAAG TGTTAGCTGG TTAAACTTTACATTA SA0910 1035111 - 1034821 - | hypothetical protein qoxC 1035713 - 1035108 - | quinol oxidase polypeptide III QoxC qoxB 1037691 - 1035703 - | quinol oxidase polypeptide I QoxB TERM 1039 1037363 - 1037353 - G 74 -6.8 -4.42594 | TAAACCAAAGATAAA TGGC ATT GCCA TGAAGATAATCATGA SA0913 1038791 - 1037691 - | hypothetical protein TERM 1040 1038347 - 1038376 + g 77 -9.5 -3.16338 | overlap 1038345 1038344 CGACAGGACGATCTT TAGGGATTGTTAA TGTA TTAACAGTCTCTA TATGTTCATCTGGAT TERM 1041 1038627 - 1038614 - G 76 -3.8 -5.27938 | ACTTGTAAATAAAAA TGGC GAACAT GCCA AGTACAACGAAACAA TERM 1042 1039344 - 1039298 - R 100 -13.5 -3.65581 | gap 1, opp_overlap 1039302 1039307, overlap 1039302 1039307 ATGAAGTTGGAATAA CAAATAAAATGGTAGCAAAACA TGTT CGTT-TGCTACCATTTTATTTA CAGTATAGTGATGAG TERM 1043 1039302 - 1039340 + r 95 -12.1 -3.64599 | opp_overlap 1039298 1039302 1039307, overlap 1039307 AGTTGGAATAACAAA TAAAATGGTAGCAAA ACATGTTCG TTTGCTACCATTTTA TTTACAGTATAGTGA TERM 1044 1039340 - 1039302 - R 100 -12.1 -4.45068 | gap 1, opp_overlap 1039302 1039307, overlap 1039298 1039307 AGTTGGAATAACAAA TAAAATGGTAGCAAAACA TGTT CGTT-TGCTACCATTTTA TTTACAGTATAGTGA TERM 1045 1039335 - 1039307 - R 90 -7.6 -5.18297 | gap 1, opp_overlap 1039302 1039307, overlap 1039302 1039298 GAATAACAAATAAAA TGGTAGCAAAACA TGTT CGTT-TGCTACCA TTTTATTTACAGTAT TERM 1046 1039307 - 1039335 + r 88 -7.6 -4.89521 | opp_overlap 1039307 1039302 1039298, overlap 1039302 GAATAACAAATAAAA TGGTAGCAAA ACATGTTCG TTTGCTACCA TTTTATTTACAGTAT SA0914 1039679 - 1039362 - | hypothetical protein TERM 1047 1040106 - 1040122 + r 79 -8 -4.20367 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTTTGTTGGGGCC TERM 1048 1040170 - 1040158 - R 71 -7.7 -3.46167 | opp_overlap 1040158, overlap 1040157 CTATAATTGAAAAAT GCTTG TTA CAAGC TTATTTTCATTCAAT TERM 1049 1040158 - 1040170 + r 79 -7.7 -4.33004 | opp_overlap 1040158 1040157 CTATAATTGAAAAAT GCTTG TTA CAAGC TTATTTTCATTCAAT TERM 1050 1040284 - 1040226 - R 100 -12.7 -3.27389 | opp_overlap 1040226 1040231, overlap 1040231 GAGCCAAGAACAAAG TGAAATGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCATTTGA TCGATTAATGTCCCA TERM 1051 1040226 - 1040284 + r 78 -10.5 -2.58714 | opp_overlap 1040226 1040231, overlap 1040231 GAGCCAAGAACAAAG TGAAATGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCATTTGA TCGATTAATGTCCCA TERM 1052 1040279 - 1040231 - R 100 -12.6 -3.95772 | opp_overlap 1040226 1040231, overlap 1040226 AAGAACAAAGTGAAA TGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCA TTTGATCGATTAATG TERM 1053 1040231 - 1040279 + r 89 -10.4 -3.80114 | opp_overlap 1040231 1040226, overlap 1040226 AAGAACAAAGTGAAA TGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCA TTTGATCGATTAATG TERM 1054 1040469 - 1040457 - R 90 -7.7 -5.1925 | opp_overlap 1040456 CTAGAATTGAAAAAA GCTTG TTA CAAGC GAATTTTCGTTCAGT folD 1041403 - 1040543 - | FolD bifunctional protein SA0916 1041604 - 1042086 + | hypothetical protein TERM 1055 1042810 - 1042834 + G 72 -2.9 -5.28778 | TATCCAATCGATTCA TTTCATTGGAA CAT TTACAGTGGAA TTTTTTATAGATAGT purK 1042073 - 1043197 + | phosphoribosylaminoimidazole carboxylase ATPase subunit purC 1043201 - 1043905 + | phosphoribosylaminoimidazole-succinocarboxamide synthase SA0919 1043905 - 1044168 + | hypothetical protein TERM 1056 1044747 - 1044731 - g 81 -10.9 -2.61341 | overlap 1044727 GAAAAAGGCAATGTA TGTGGCA TGA TGCCACA TCCTGAAAGAGCTTT purQ 1044170 - 1044841 + | phosphoribosylformylglycinamidine synthase I TERM 1057 1046371 - 1046353 - g 95 -9 -4.8743 | opp_overlap 1046357, overlap 1046363 CTGAAAAGAAAGAAA TCTATCAA CAG TTGATAGA TTCAACGAAAGGTAT purL 1044834 - 1047023 + | phosphoribosylformylglycinamidine synthase II purF 1047002 - 1048486 + | amidophosphoribosyltransferase purM 1048479 - 1049507 + | phosphoribosylaminoimidazole synthetase purN 1049510 - 1050076 + | phosphoribosylglycinamide formyltransferase TERM 1058 1050871 - 1050856 - g 71 -7.6 -3.53444 | opp_overlap 1050855 1050856 1050858 GCAGTTGCGGTTAAA CACATG AATC CATGTG GTGTTGGTATCGGTG purH 1050088 - 1051569 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purD 1051699 - 1052838 + | phosphoribosylamine--glycine ligase TERM 1059 1052864 - 1052902 + T 82 -6.3 -5.32944 | gap 1, opp_overlap 1052864 1052877, overlap 1052877 AAAATACTAAGATTA GCTATGA-AGAAATCTAT AACG ATAGTTTTTTTTCATAGC TTTTTTAGTTGTAGA TERM 1060 1052877 - 1052888 + T 86 -3 -5.86965 | opp_overlap 1052864 1052877, overlap 1052864 TAGCTATGAAGAAAT CTAT AACG ATAG TTTTTTTTCATAGCT TERM 1061 1052973 - 1053023 + T 72 -4.9 -4.97158 | gap 1, opp_overlap 1052973 ATATGTAATACAAAA GAGGCGCCAC-AACATGTTT GGATGAACAAAA TAACATGTTTGTGGCACCTC TTTTGTTTAGTATGG TERM 1062 1053023 - 1052973 - T 82 -7.1 -4.69326 | gap 1, opp_overlap 1052973 ATATGTAATACAAAA GAGGCGCCAC-AACATGTTT GGATGAACAAAA TAACATGTTTGTGGCACCTC TTTTGTTTAGTATGG SA0927 1053912 - 1053106 - | hypothetical protein TERM 1063 1053373 - 1053395 + g 80 -7.1 -4.61231 | gap 1 CCCTCTATAATTTGC TGCGTCTATC ATCT GATAG-CGCA TTTTTAAAGATCTGC SA0928 1055305 - 1053905 - | hypothetical protein TERM 1064 1054403 - 1054383 - G 71 -6.3 -4.11216 | opp_overlap 1054394, overlap 1054387 CGCTGATTTTCAAAA TAAACATCA CCT TGATATTTA ATCAATTGCATAATT SA0929 1055895 - 1055320 - | hypothetical protein TERM 1065 1055948 - 1055920 - H 100 -10.3 -5.7946 | CTCCTAATAAAAAAA CGCACAACCATCC ATA GGAAAGTTATGCG TTCACAATATATATT SA0930 1056358 - 1056567 + | hypothetical protein TERM 1066 1056688 - 1056672 - T 74 -8.7 -3.29958 | overlap 1056670 GGAAGAAGAGGAACA CATGCGC CGA GCACATG CATAAAAGCCCCTAA TERM 1067 1056724 - 1056696 - T 100 -10.3 -4.45485 | opp_overlap 1056696 1056697, overlap 1056697 AGCACATGCATAAAA GCCCCTAACAACT AAA AGTTGTAAGGGGA TTTAAATTAATTTAG TERM 1068 1056696 - 1056724 + T 89 -10.3 -3.83214 | opp_overlap 1056696 1056697, overlap 1056697 AGCACATGCATAAAA GCCCCTAACAACT AAA AGTTGTAAGGGGA TTTAAATTAATTTAG TERM 1069 1056723 - 1056697 - T 100 -13.8 -3.26568 | opp_overlap 1056697 1056696, overlap 1056696 GCACATGCATAAAAG CCCCTAACAACT AAA AGTTGTAAGGGG ATTTAAATTAATTTA TERM 1070 1056697 - 1056723 + T 100 -13.8 -2.89205 | opp_overlap 1056696 1056697, overlap 1056696 GCACATGCATAAAAG CCCCTAACAACT AAA AGTTGTAAGGGG ATTTAAATTAATTTA SAS030 1056865 - 1056731 - | hypothetical protein TERM 1071 1057323 - 1057334 + G 74 -3 -5.2204 | ATTAAGTATGACTAT GATA TTTC TATC TTTTTCTTAGTTATC SA0931 1057017 - 1058312 + | hypothetical protein SA0932 1058737 - 1059909 + | hypothetical protein SA0933 1059963 - 1060505 + | hypothetical protein TERM 1072 1060519 - 1060533 + F 77 -7.2 -4.25104 | opp_overlap 1060518 AGGTGCTATAATAGT TTTGCA ATT TGCAAA TTTTACTGAAACCGG ptsH 1060659 - 1060925 + | phosphocarrier protein HPr TERM 1073 1061248 - 1061224 - g 100 -13.7 -4.80167 | GATTAAAAATGAAAA CGCTAATGCTG CTA CAGCATTAACG GATGTAACAACACAA TERM 1074 1062183 - 1062169 - g 76 -2.8 -5.44638 | AGAAGAAAAAGAAAA CCTTAA AAA TGAAGG TCATGACATTTCGGA ptsI 1060928 - 1062646 + | phosphoenolpyruvate-protein phosphatase TERM 1075 1062677 - 1062721 + T 100 -12.4 -5.43621 | opp_overlap 1062680, overlap 1062680 GACAGAATTATAAAT AAACCCGAAGTATTCATTGT GAGTA ATTATGAATACTTCGGGTTC TTTTTTATGATTTAT TERM 1076 1062680 - 1062718 + T 100 -14.1 -4.75967 | opp_overlap 1062680, overlap 1062677 AGAATTATAAATAAA CCCGAAGTATTCATTGT GAGTA ATTATGAATACTTCGGG TTCTTTTTTATGATT TERM 1077 1062718 - 1062680 - T 100 -12 -4.63526 | opp_overlap 1062677 1062680 AGAATTATAAATAAA CCCGAAGTATTCAT TGTGAGTAATT ATGAATACTTCGGG TTCTTTTTTATGATT SA0936 1063116 - 1062883 - | hypothetical protein SA0937 1063314 - 1064675 + | hypothetical protein SA0938 1064672 - 1065691 + | hypothetical protein SA0939 1065824 - 1066486 + | hypothetical protein TERM 1078 1066580 - 1066568 - T 90 -7.7 -5.1925 | opp_overlap 1066567 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SA0940 1068429 - 1066732 - | hypothetical protein SA0941 1068599 - 1068429 - | hypothetical protein TERM 1079 1068825 - 1068808 - R 72 -4.2 -5.0538 | GTTCATTTTAAAAAA TTAGTG AAATAA CACTAA AATTTCAGTTAAATC TERM 1080 1069104 - 1069078 - R 86 -7.4 -5.18726 | opp_overlap 1069078 GTTGTACAAGAAAAA GCTTAGGACA TCATATT TATCCTAAGC TTTGATAATTAGTAA def 1069680 - 1069129 - | peptide deformylase SA0943 1070045 - 1070671 + | hypothetical protein TERM 1081 1071407 - 1071433 + G 84 -8 -4.56133 | opp_overlap 1071406 ACGAAGGTATTAACT TTGCAGCAGCTT ATA AAGCACCTGCAA TTTTCGTTATTCAAA pdhA 1070842 - 1071954 + | pyruvate dehydrogenase E1 component alpha subunit TERM 1082 1072891 - 1072875 - g 89 -9.5 -4.19953 | CACTCAAGCTGAAAA TGTTTGG TTA CCAAACA AAAATGACATCATCG pdhB 1071958 - 1072935 + | pyruvate dehydrogenase E1 component beta subunit TERM 1083 1073526 - 1073514 - g 73 -7.7 -3.72141 | AGATGCATACTTAAA TGGTG GTG CACCA ACAGCTTCAAATGAA TERM 1084 1073599 - 1073579 - g 82 -9.7 -3.56366 | opp_overlap 1073579, overlap 1073566 1073562 1073569 AAGAAGTTGCTGAAA CTCCTGCAG CAC CTGCAGCAG TATCATTAGAAGGCG TERM 1085 1073579 - 1073599 + G 76 -9.7 -2.90075 | opp_overlap 1073566 1073562 1073569 1073579 AAGAAGTTGCTGAAA CTCCTGCAG CAC CTGCAGCAG TATCATTAGAAGGCG pdhC 1073026 - 1074318 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1086 1074759 - 1074747 - g 80 -6.3 -4.69622 | ATACAACTTTAAAAA TGCAA TCA TTGCA ACAGGTTCAAGACCA pdhD 1074322 - 1075728 + | dihydrolipoamide dehydrogenase TERM 1087 1075763 - 1075782 + F 100 -10 -5.80951 | opp_overlap 1075763 ATTCAGTCATTAAAA GCTGTAGC ATAT GCTACGGC TTTTTTGTTTTAGGT TERM 1088 1075782 - 1075763 - f 79 -7.8 -4.28548 | opp_overlap 1075763 ATTCAGTCATTAAAA GCTGTAGC ATAT GCTACGGC TTTTTTGTTTTAGGT SA0947 1075896 - 1076171 + | hypothetical protein SA0949 1076315 - 1076854 + | hypothetical protein potA 1076867 - 1077961 + | hypothetical protein potB 1077954 - 1078751 + | hypothetical protein TERM 1089 1079312 - 1079328 + G 80 -7.3 -4.59993 | ATTCCTAATATTTTA CCTTCTA TTA TAGGAGG TTTCTTTATGGCTTT potC 1078757 - 1079566 + | hypothetical protein potD 1079566 - 1080639 + | hypothetical protein SA0954 1080713 - 1081732 + | hypothetical protein TERM 1090 1081745 - 1081785 + F 100 -14.3 -4.98522 | opp_overlap 1081745 TAAATATTGATGATA CCCAGATTAGTAAGTAGAG GTC TTTTGCTTATTAATCTGGG TTTTTATATGAGGTT SA0955 1082015 - 1082434 + | hypothetical protein TERM 1091 1082454 - 1082504 + T 73 -3.7 -5.29885 | gap 2, opp_overlap 1082454 TTCATAGCAAAAAAA CCATTAAAATGTTAAGTTGTTAATT ATT AGATA-CAACC-AACATTTTAATGG TTTTATTTTTAACTT TERM 1092 1082504 - 1082454 - T 88 -5.9 -5.58454 | gap 1, opp_overlap 1082454 TTCATAGCAAAAAAA CCATTAAAATGTTAAGTTGT TAATTATTAGAT ACAACC-AACATTTTAATGG TTTTATTTTTAACTT SA0956 1083865 - 1082513 - | hypothetical protein TERM 1093 1083915 - 1083930 + r 80 -6.2 -4.88646 | opp_overlap 1083908 1083914 1083915 TAACCTAATAAAATG TTTAGG TCAA CCTAAA TTTATTTTAATTTTT TERM 1094 1083995 - 1084030 + r 90 -9.8 -3.90922 | opp_overlap 1083997, overlap 1083997 TTAATATTAAGAAAA AAGAGCACGAAATCAT GGAT GTGATTACGTGCTCTA TTATTTAAACAAAGT TERM 1095 1084028 - 1083997 - R 100 -11.7 -5.54885 | opp_overlap 1083995 1083997 AATATTAAGAAAAAA GAGCACGAAATCA TGGATG TGATTACGTGCTC TATTATTTAAACAAA TERM 1096 1083997 - 1084028 + r 100 -12.4 -3.54488 | opp_overlap 1083997, overlap 1083995 AATATTAAGAAAAAA GAGCACGAAATCAT GGAT GTGATTACGTGCTC TATTATTTAAACAAA SA0957 1084663 - 1084049 - | hypothetical protein SA0958 1084820 - 1085647 + | hypothetical protein TERM 1097 1085652 - 1085701 + T 82 -11.1 -2.55544 | gap 1, opp_overlap 1085648 1085657, overlap 1085657 AATCAAAATAATTAC CAAAAGCGTAATATGTAGTCCTAA CAA TTAGG-TAACATATTACGCTTTTA TACCTTAAATAATAA TERM 1098 1085696 - 1085657 - T 88 -8.8 -4.40037 | gap 1, opp_overlap 1085652 1085657, overlap 1085648 AAATAATTACCAAAA GCGTAATATGTAGTCCTAA CAA TTAGGTA-ACATATTACGC TTTTATACCTTAAAT TERM 1099 1085657 - 1085696 + T 100 -11 -4.47551 | gap 1, opp_overlap 1085657 1085648, overlap 1085652 AAATAATTACCAAAA GCGTAATATGTAGTCCTAA CAA TTAGG-TAACATATTACGC TTTTATACCTTAAAT TERM 1100 1085760 - 1085746 - T 71 -7.2 -3.77014 | opp_overlap 1085746 ATAAAACCATTTAAA TGTTCA TAA TGAACA TGTGTGGTCTTAAAT SAS031 1085992 - 1085801 - | hypothetical protein TERM 1101 1086853 - 1086873 + G 73 -7.7 -3.75332 | GTGAAAAACTTCCGT GTAACTAAA ATC TTTGGTTAC TTTGGATTAAAACGT SA0959 1086094 - 1087941 + | hypothetical protein TERM 1102 1087995 - 1087952 - T 77 -8.3 -3.73359 | opp_overlap 1087957, overlap 1087957 AATAATTTAACATAA TAAAAGAGAAGCTGAGCGA TGAAAG TTGCTTAGCTTCTCTTTTG GCATATAATATTTGA TERM 1103 1087957 - 1087990 + T 100 -13.3 -4.17657 | opp_overlap 1087952 1087957 TTTAACATAATAAAA GAGAAGCTGAGCGAT GAAA GTTGCTTAGCTTCTC TTTTGGCATATAATA TERM 1104 1087990 - 1087957 - T 90 -8.2 -4.90381 | opp_overlap 1087957, overlap 1087952 TTTAACATAATAAAA GAGAAGCTGAGCGA TGAAAG TTGCTTAGCTTCTC TTTTGGCATATAATA SAS032 1088248 - 1088081 - | hypothetical protein SA0960 1088732 - 1088250 - | hypothetical protein SA0961 1088873 - 1089148 + | hypothetical protein TERM 1105 1089229 - 1089285 + F 70 -8.2 -3.08314 | overlap 1089233 1089238 TTTATAGTTTAATTA CTGATTAAAGTGGCTGTTATGTTGTC TTCTT GATGACATGTCAGTCACTTTTATTGG GTTTTAGCAATTCAC TERM 1106 1089238 - 1089276 + F 82 -7.5 -4.77719 | overlap 1089233 1089229 TAATTACTGATTAAA GTGGCTGTTATGTTGTC TTCTT GATGACATGTCAGTCAC TTTTATTGGGTTTTA SA0962 1089567 - 1090688 + | hypothetical protein TERM 1107 1090796 - 1090828 + F 88 -5.7 -5.52079 | opp_overlap 1090796 1090800 GATGAGTTCAATAAC GGAAGTTAGGC AACCAAACAAC GCTTAACTTCC TTTTTGTTTTGATAT TERM 1108 1091739 - 1091725 - g 70 -7.1 -3.84246 | CCGCTAATGATTAAA GCCAC AAGTG GTGGC GGCGGTAAAGGTATG pycA 1091242 - 1094694 + | pyruvate carboxylase TERM 1109 1094747 - 1094706 - T 100 -12.5 -4.42667 | opp_overlap 1094711, overlap 1094711 CTAAAATGATTAAAA TAAAACGAGATTACACAAC AATT GACGTGTAATCTCGTTTTT ACATGGCTTAGGTTT TERM 1110 1094711 - 1094742 + T 100 -10.2 -4.68424 | opp_overlap 1094711 1094706 ATGATTAAAATAAAA CGAGATTACACAAC AATT GACGTGTAATCTCG TTTTTACATGGCTTA TERM 1111 1094742 - 1094711 - T 100 -12.4 -5.14626 | opp_overlap 1094711, overlap 1094706 ATGATTAAAATAAAA CGAGATTACACAAC AATT GACGTGTAATCTCG TTTTTACATGGCTTA TERM 1112 1094782 - 1094826 + T 100 -13.2 -5.66229 | opp_overlap 1094787, overlap 1094787 TTAAATATTGATATA AAAAACCGTAATTTTAATGG GCGTG CCATTAAAATTACGGTTTGC TTTTTTGTTATTGCT TERM 1113 1094821 - 1094787 - T 100 -17.5 -5.38047 | opp_overlap 1094782 1094787 TATTGATATAAAAAA CCGTAATTTTAATGG GCGTG CCATTAAAATTACGG TTTGCTTTTTTGTTA TERM 1114 1094787 - 1094821 + T 100 -17.5 -4.51301 | opp_overlap 1094787, overlap 1094782 TATTGATATAAAAAA CCGTAATTTTAATGG GCGTG CCATTAAAATTACGG TTTGCTTTTTTGTTA SA0964 1095745 - 1094834 - | hypothetical protein TERM 1115 1095240 - 1095269 + g 70 -3.7 -4.85129 | gap 1 CAATAAATGATGATT GCCATTAACCATGT TAA ACGTC-TTAATGGC TTTTTGATATATAAT TERM 1116 1096717 - 1096730 + G 90 -8.1 -5.00412 | GACAAATTAGTTTAA CAGCG ATTG CGCTG TTTTTAGTTGTATTT TERM 1117 1097031 - 1097049 + G 82 -9 -4.05583 | opp_overlap 1097030 CAAATGTTTATATAT TCACTAAA TTA TTTAGTGA TCTTTTTCGTGTTAG ctaB 1096182 - 1097096 + | protoheme IX farnesyltransferase SA0966 1097121 - 1097582 + | hypothetical protein TERM 1118 1097606 - 1097632 + F 86 -7.4 -5.14563 | opp_overlap 1097607, overlap 1097607 TACAAATGATACTAA TCTGATAAGGCA ATT TGTTTTATCAGG TTTTTTGATGAAGAA TERM 1119 1097607 - 1097631 + F 77 -8.7 -3.68256 | opp_overlap 1097607, overlap 1097606 ACAAATGATACTAAT CTGATAAGGCA ATT TGTTTTATCAG GTTTTTTGATGAAGA TERM 1120 1097652 - 1097691 + F 88 -5.9 -5.65177 | gap 1, overlap 1097653 TTGATGAAGAATAGT CGGACAGTTGATGGTATT CATTT GATACC-TTAACTGTCCA TTTTTTTATACATAT TERM 1121 1097653 - 1097690 + F 86 -9.4 -3.9748 | gap 1, overlap 1097652 TGATGAAGAATAGTC GGACAGTTGATGGTATT CATTT GATACC-TTAACTGTCC ATTTTTTTATACATA TERM 1122 1098660 - 1098644 - g 72 -5.9 -4.42667 | TTAAAAGGATTAAAA CCATTGA AAA TCAATAG CGATTTAGCACATAT SA0967 1097909 - 1098946 + | hypothetical protein SA0968 1098962 - 1099396 + | hypothetical protein TERM 1123 1099442 - 1099455 + T 71 -2.4 -5.47159 | GAAACCACTAACTAG CATC TGACTC GATG TTTTTATTTATTCGG SA0969 1100385 - 1099459 - | hypothetical protein TERM 1124 1099818 - 1099808 - G 74 -5.4 -4.82901 | TGTTCTTTATAAAAA CTTG TCA CAAG AACGCGGTCAAATGC SA0970 1100624 - 1100878 + | hypothetical protein SA0971 1101270 - 1100881 - | hypothetical protein SA0972 1101340 - 1101882 + | hypothetical protein SA0973 1101884 - 1102366 + | hypothetical protein TERM 1125 1102420 - 1102373 - T 90 -8 -5.1963 | opp_overlap 1102376, overlap 1102376 TTTAAGTAATAAAAA TAACAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTGTTT TCATTTGTTAACGAT TERM 1126 1102417 - 1102376 - T 100 -9.7 -4.67357 | opp_overlap 1102376, overlap 1102373 AAGTAATAAAAATAA CAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTG TTTTCATTTGTTAAC TERM 1127 1102376 - 1102417 + T 81 -7.5 -4.67942 | opp_overlap 1102376 1102373 AAGTAATAAAAATAA CAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTG TTTTCATTTGTTAAC SA0974 1103567 - 1102428 - | hypothetical protein TERM 1128 1103159 - 1103177 + g 77 -6 -4.82678 | ATTCGCTAATGATAC GAGGGTAG CTT TTACCTTC TTTTACTTTTTGTGA SA0975 1103694 - 1104251 + | hypothetical protein rpmF 1104331 - 1104504 + | 50S ribosomal protein L32 TERM 1129 1104558 - 1104527 - T 100 -10.3 -5.10767 | opp_overlap 1104527 TACTCAATATAAAAA GTCCCGCTTAAAA TGATTG TTTTAAGTGGGAC TTTTTATATTGCGAA TERM 1130 1104527 - 1104558 + T 100 -13.2 -5.0916 | opp_overlap 1104527 TACTCAATATAAAAA GTCCCGCTTAAAAT GATT GTTTTAAGTGGGAC TTTTTATATTGCGAA TERM 1131 1104576 - 1104619 + T 75 -9.7 -2.53134 | opp_overlap 1104577, overlap 1104575 1104574 1104570 TTTATATTGCGAAAA ATAATTGGCGAACGAGGTA ACTGGA TACCTCATCCGCCAATTAA AATTTGTTAATTTAA TERM 1132 1104618 - 1104577 - T 100 -17.6 -4.61231 | opp_overlap 1104576 1104575 1104574 1104570 TTATATTGCGAAAAA TAATTGGCGAACGAGGTA ACTGGA TACCTCATCCGCCAATTA AAATTTGTTAATTTA isdB 1106595 - 1104658 - | hypothetical protein TERM 1133 1104900 - 1104914 + g 70 -4.3 -4.72272 | CTGCTGAAGTTTGAA CAACA TCTTT TGTTG TTTTTGATGAAGCAG TERM 1134 1105039 - 1105057 + g 74 -3.1 -5.26119 | CGTTTTGTCTTTACC TGACTCA CTAGA TGCGTCA TTTTCTTTTTCAACA TERM 1135 1106650 - 1106626 - R 73 -9.5 -2.64794 | opp_overlap 1106623 1106626 1106622, overlap 1106630 1106634 CCTAATTGTATATTA TCAACTGATAA TCA TTATCAATTGA TTACTTGTATTGTAC TERM 1136 1106748 - 1106707 - R 100 -11.3 -5.626 | gap 1, opp_overlap 1106707 1106710, overlap 1106691 TATTTTATAAAAAAA TAACCTATGTTATAGATTAT GAA AT-ATCTATGACATAGGTTA AATAAAATTTAAAAT TERM 1137 1106710 - 1106745 + r 85 -10.8 -3.08966 | gap 1, opp_overlap 1106707, overlap 1106707 TTTATAAAAAAATAA CCTATGTTATAGATTAT GAA AT-ATCTATGACATAGG TTAAATAAAATTTAA isdA 1107850 - 1106798 - | cell surface protein isdC 1108059 - 1108742 + | hypothetical protein TERM 1138 1108831 - 1108864 + G 87 -10.5 -3.73775 | gap 1, overlap 1108832 AATGATTGGTAGCGT GTTGGCTGATGAGATA AAA TATC-CATCAGCCAAA TTTAATCAACCTGAA TERM 1139 1108832 - 1108863 + G 93 -14 -2.84051 | gap 1, overlap 1108831 ATGATTGGTAGCGTG TTGGCTGATGAGATA AAA TATC-CATCAGCCAA ATTTAATCAACCTGA isdD 1108742 - 1109818 + | hypothetical protein isdE 1109815 - 1110693 + | hypothetical protein TERM 1140 1110992 - 1111012 + G 72 -6.1 -4.30477 | TTGGCGTTTCCTCAG GTGCACTTA TAA TGAGAGCAC TTTGTATGTTGTTTA isdF 1110850 - 1111671 + | hypothetical protein srtB 1111733 - 1112467 + | NPQTN specific sortase B isdG 1112486 - 1112809 + | heme-degrading monooxygenase IsdG TERM 1141 1112868 - 1112895 + F 86 -5 -5.52384 | gap 1 TGTTAGCTTTTGTAA CGACCATACAT GATACCG ATG-ATGGTCG TTTTTTTAATGAACA TERM 1142 1113144 - 1113158 + F 82 -4.4 -5.61881 | opp_overlap 1113157 CAAATGTTTTCATCT TATTAA TGA TTAATA TTTTTATTTTTAAAA SA0984 1113193 - 1113933 + | hypothetical protein TERM 1143 1114209 - 1114245 + F 100 -12.6 -5.26875 | gap 1, opp_overlap 1114209, overlap 1114203 GTGGTACCACGGAAA TGACTTTCGTCC-CTTA TTTT TAAGAGGATGAAAGTCA TTTTTTAGTTAAACA TERM 1144 1114245 - 1114209 - f 85 -10.4 -3.68351 | gap 1, opp_overlap 1114203 1114209 GTGGTACCACGGAAA TGACTTTCGTCC-CTTA TTTT TAAGAGGATGAAAGTCA TTTTTTAGTTAAACA pheS 1114313 - 1115371 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1145 1115958 - 1115948 - g 71 -3.2 -5.1764 | TATATAATACAAAAA TGAC TAA GCCA GAGACAACATCAAAT pheT 1115371 - 1117773 + | Phe-tRNA synthetase beta chain TERM 1146 1117778 - 1117835 + T 100 -12.5 -4.74103 | gap 1, opp_overlap 1117783, overlap 1117783 TTATTAGATAATGAT TTAAACCCCATGTATAAGGATATC TGAAGTAGATT GATATCCTTA-ACATGGGGTTTTA TTTTTGGATTCACCA TERM 1147 1117830 - 1117783 - T 100 -12.4 -3.73386 | gap 1, opp_overlap 1117783 1117778 AGATAATGATTTAAA CCCCATGTATAAGGATATC TGAAGTAGATT GATATCCTTA-ACATGGGG TTTTATTTTTGGATT TERM 1148 1117783 - 1117830 + T 100 -12.4 -5.29885 | gap 1, opp_overlap 1117783, overlap 1117778 AGATAATGATTTAAA CCCCATGTATAAGGATATC TGAAGTAGATT GATATCCTTA-ACATGGGG TTTTATTTTTGGATT TERM 1149 1117958 - 1117926 - T 70 -6.3 -4.06892 | opp_overlap 1117926 ACAACTGCATATAAA GTCATACTTATGAGC AAA GCAAATTAGTATGAC TTACCTAATAGGATT TERM 1150 1118048 - 1118034 - T 72 -8.6 -2.94925 | ACAGTGGATTACAGA TGATGC TTC GCATCA CTGCATATAAAGTCA TERM 1151 1118092 - 1118060 - T 70 -6.3 -4.053 | opp_overlap 1118060 ATCACTGCATATAAA GTCATACTTATGAGC AAA GCAAATTAGTATGAC TTACCTAATAGGATC TERM 1152 1118214 - 1118187 - T 74 -6.4 -4.43859 | gap 1, opp_overlap 1118187 1118182, overlap 1118205 CACAACTGCATAAAA GCCTCTAATGATT AAA AATCAA-AGAGGC TTTAAAATTTTTTGG SA0987 1119143 - 1118205 - | ribonuclease HIII TERM 1153 1118446 - 1118456 + g 76 -4 -5.34857 | GACTTCGATTCTCCT TTTG TTT CAAA TTTTGTTTTCTTTGG SA0988 1119513 - 1119779 + | hypothetical protein SA0989 1119780 - 1120301 + | hypothetical protein SA0990 1120374 - 1122086 + | hypothetical protein mutS2 1122096 - 1124444 + | recombination and DNA strand exchange inhibitor protein trxA 1124617 - 1124931 + | thioredoxin TERM 1154 1124949 - 1124978 + F 100 -8.6 -5.48623 | opp_overlap 1124939 TATAACCAATGACGA CTGGGGCATTTC TTTAAT GAATTGCTCCAG TTTTTGTTTGTGTTT TERM 1155 1125889 - 1125903 + G 71 -8.6 -3.04715 | overlap 1125888 AGCGAATGTTAACTG CAAGTG AAT CACTTG ATTTTGAACGGGCTA uvrC 1125255 - 1127036 + | excinuclease ABC subunit C TERM 1156 1127072 - 1127038 - f 76 -6.4 -4.56969 | opp_overlap 1127038, overlap 1127041 1127042 AATTGCATAAATAAA TTACTGGGCGTGAGAA TCA TTCTCATGCCCCAAAA TATATGAAATAATGT TERM 1157 1127069 - 1127041 - f 72 -8.1 -3.22499 | opp_overlap 1127038, overlap 1127038 1127042 TGCATAAATAAATTA CTGGGCGTGAGAA TCA TTCTCATGCCCCA AAATATATGAAATAA TERM 1158 1127068 - 1127042 - f 73 -9.4 -2.52776 | opp_overlap 1127038, overlap 1127041 1127038 GCATAAATAAATTAC TGGGCGTGAGAA TCA TTCTCATGCCCC AAAATATATGAAATA TERM 1159 1127099 - 1127109 + F 82 -4 -5.50499 | ATGTTACAATATGGT TAAC AAA GTTA TTTTTTTGAATGTAC sdhC 1127360 - 1127974 + | succinate dehydrogenase cytochrome b-558 TERM 1160 1129451 - 1129439 - g 84 -6.3 -5.0925 | CGTGAAAATGAAAAA CTGTT AGA AACAG ATAAAAAGATTGTTG sdhA 1128026 - 1129792 + | succinate dehydrogenase flavoprotein subunit TERM 1161 1130014 - 1130003 - g 76 -4.4 -5.12707 | TTAAAGGTGAAAAAA CAAC ACCT GTTG TCTGGGATATGAACT sdhB 1129792 - 1130607 + | succinate dehydrogenase iron-sulfur subunit murI 1130843 - 1131643 + | glutamate racemase TERM 1162 1131860 - 1131842 - g 83 -7.5 -4.69656 | AAGCATTGAATAAAA CTGTCAT AGCTG ATGACAG TGGACTAGAAGTTTT TERM 1163 1132098 - 1132116 + G 74 -6 -4.52589 | overlap 1132100 ATATGGCGAAAATGG TTTCGGAT ATG ATCCGATA TTTTATGTACCGAAA TERM 1164 1132100 - 1132114 + G 79 -8.6 -3.87627 | overlap 1132098 ATGGCGAAAATGGTT TCGGAT ATG ATCCGA TATTTTATGTACCGA SA0998 1131655 - 1132242 + | hypothetical protein SA0999 1132235 - 1132738 + | hypothetical protein TERM 1165 1132722 - 1132755 + F 90 -4.8 -5.75822 | gap 1 ATCACGAAACAATCA GTCATA-CTACTTTT TAAAT AGAAGTAGCTATGGC TTTTTTTAGTTTATA SAS034 1132896 - 1133033 + | hypothetical protein SA1000 1133227 - 1133556 + | hypothetical protein TERM 1166 1133566 - 1133585 + T 78 -6.4 -4.84527 | AAATAATTGATAGAA GCCATGCT ATAG AGTGTGGC TTTTTGCTATATCCA TERM 1167 1133901 - 1133860 - T 100 -11.8 -5.80951 | gap 1, opp_overlap 1133871 ACTTAAAATAAAAAA GCACGCCAATACGTTAGCA TTGTT TTCTAACGT-TTGGCGTAC AACTATTTAATTCAG SA1001 1134326 - 1133925 - | formyl peptide receptor-like 1 inhibitory protein TERM 1168 1134183 - 1134201 + g 71 -3.2 -5.1361 | ACGTTCATCGTCCTT TTTAGC TTGATCT GCTAAA TTTTTTGCGATTTCT TERM 1169 1134922 - 1134945 + H 80 -6.8 -4.77438 | overlap 1134925 GGCATTGAGTATTAT TGGCAATCAC TTAA GTGATTGTTA TTTTTCGTGGTCAAT TERM 1170 1134925 - 1134942 + H 85 -8.5 -4.49314 | overlap 1134922 ATTGAGTATTATTGG CAATCAC TTAA GTGATTG TTATTTTTCGTGGTC TERM 1171 1135390 - 1135366 - g 79 -3.7 -5.40004 | opp_overlap 1135389, overlap 1135368 CAGTAAATGAAAAAA TGGACATTAAT GAT ATTAATATCGA CAATTTCCAATCTGT SA1002 1134996 - 1135502 + | hypothetical protein TERM 1172 1135525 - 1135547 + F 91 -4.9 -5.9218 | GAAATTATACCATCA GACACCA ACATTCAAA TGGTGTC TTTTTTTGTTGTGTG SA1003 1135762 - 1136259 + | hypothetical protein TERM 1173 1136293 - 1136305 + F 81 -3.5 -5.5112 | AAGTTCAAAATAATT TAATA TTA TATTA TTTTTTATTAATAAA SA1004 1136409 - 1136759 + | hypothetical protein TERM 1174 1136803 - 1136764 - T 82 -8 -4.48664 | opp_overlap 1136769, overlap 1136769 TAAATAGATAATAAA TAAAACAGGTTGAGACAA AAAA TGGTCTTAACCTGTTTTC AATTTGCATATGTGA TERM 1175 1136798 - 1136769 - T 90 -7.9 -5.16038 | opp_overlap 1136769, overlap 1136764 AGATAATAAATAAAA CAGGTTGAGACAA AAAA TGGTCTTAACCTG TTTTCAATTTGCATA TERM 1176 1136769 - 1136798 + T 100 -10.1 -4.36595 | opp_overlap 1136769 1136764 AGATAATAAATAAAA CAGGTTGAGACAA AAAA TGGTCTTAACCTG TTTTCAATTTGCATA TERM 1177 1137226 - 1137207 - T 76 -9.4 -3.09273 | opp_overlap 1137211, overlap 1137211 GGGCCCCAACATAGA GAAATTGG ATCA CCAATTTC AACAGACAATGCAAG TERM 1178 1137410 - 1137430 + T 86 -9.1 -3.94773 | overlap 1137412 AATTAGTATTTCTTA TGCATGAGT TTT ACTCATGTA TTCATTTTTTAAGTA TERM 1179 1137412 - 1137428 + T 81 -9.5 -3.54575 | overlap 1137410 TTAGTATTTCTTATG CATGAGT TTT ACTCATG TATTCATTTTTTAAG TERM 1180 1137508 - 1137464 - T 100 -14.8 -3.13728 | gap 1, opp_overlap 1137464 1137471, overlap 1137448 1137471 1137474 ATTAGCTACAGCTAA TGATAAAGAACCACTACATAA TAAA TCAT-TAGTGGTTCTTTATCA TTTCTATCTCACTCT TERM 1181 1137464 - 1137508 + T 100 -12.6 -4.14392 | gap 1, opp_overlap 1137448 1137464 1137471 1137474, overlap 1137471 ATTAGCTACAGCTAA TGATAAAGAACCACTACATAA TAAA TCAT-TAGTGGTTCTTTATCA TTTCTATCTCACTCT TERM 1182 1137501 - 1137471 - T 75 -7.1 -4.07306 | gap 1, opp_overlap 1137464 1137471, overlap 1137464 1137474 ACAGCTAATGATAAA GAACCACTACATAA TAAA TCAT-TAGTGGTTC TTTATCATTTCTATC SAS035 1137710 - 1137525 - | hypothetical protein SA1005 1138565 - 1138332 - | hypothetical protein TERM 1183 1138779 - 1138798 + H 83 -8 -4.52857 | opp_overlap 1138767 1138768 1138779, overlap 1138769 1138768 TAATGTGTTCAAAAA GTTTTGAA CAAT TTCAAAAC TTTTATATAAAGGGT TERM 1184 1138798 - 1138779 - H 83 -8 -4.58283 | opp_overlap 1138769 1138768 1138779, overlap 1138767 1138768 TAATGTGTTCAAAAA GTTTTGAA CAAT TTCAAAAC TTTTATATAAAGGGT TERM 1185 1138983 - 1139004 + H 82 -4.4 -5.52384 | overlap 1138986 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 1186 1140400 - 1140370 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC SA1006 1139084 - 1140403 + | IS1181 transposase TERM 1187 1140518 - 1140482 - T 77 -6 -4.93365 | gap 1, opp_overlap 1140481 GTGGAGAACCAAAAA TTAGCCGAAAAACATCA TTTC TGAAGT-TATCGGCTAA AGTTATAAATTATAT SA1007 1141521 - 1140562 - | alpha-hemolysin SA1008 1142324 - 1142521 + | hypothetical protein TERM 1188 1142611 - 1142573 - T 100 -14.9 -3.51202 | opp_overlap 1142571 1142570 1142609, overlap 1142569 CATTAAATGAAGGAA TAGAGCCTAAGACAT AATAAATCA ATGTCTTAGGCTCTA CAATATTATATTGGT TERM 1189 1142702 - 1142686 - T 72 -8 -3.68024 | GGCCCCAACACAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA SAS036 1142879 - 1142748 - | hypothetical protein SA1009 1143727 - 1143011 - | superantigen-like protein SA1010 1144560 - 1143835 - | superantigen-like protein TERM 1190 1143986 - 1143996 + g 76 -2.6 -5.48054 | opp_overlap 1143986 CCTTTATTATAAGAA TTAT TAT ATAA TTTTTTACTTTTAAT SA1011 1145380 - 1144655 - | superantigen-like protein argF 1145818 - 1146819 + | ornithine carbamoyltransferase SA1013 1146842 - 1147774 + | carbamate kinase TERM 1191 1147832 - 1147876 + F 71 -6 -4.4388 | gap 2 ATTTTTATTATTTAT GTGCACCCC-C-TGAAAATA ATGCCTC TATTTTGATGCGGGGTGCAC TTTCTTAATTTATAT SA1014 1147946 - 1149502 + | hypothetical protein SA1015 1149809 - 1150036 + | hypothetical protein TERM 1192 1150298 - 1150279 - T 100 -10 -4.86133 | opp_overlap 1150279 GATATACACTAAAAA GAGGCAAG ATTA CCTGCCTC TTTTTTAGTTATTAA TERM 1193 1150279 - 1150298 + T 95 -7.8 -5.37865 | opp_overlap 1150279 GATATACACTAAAAA GAGGCAAG ATTA CCTGCCTC TTTTTTAGTTATTAA SA1016 1151289 - 1150342 - | hypothetical protein TERM 1194 1150850 - 1150835 - G 76 -4.6 -5.1675 | TGACCTATGAAAAAA CATCCG CTAA CGGGTG CCGTCAATCCTGCGA TERM 1195 1151084 - 1151074 - G 70 -4 -4.84527 | GCCAGACATGAAAAA TGTT GTG AACA CTGATGAAACTAGAG SA1017 1151538 - 1151726 + | hypothetical protein TERM 1196 1151757 - 1151782 + F 95 -8.3 -5.51402 | opp_overlap 1151760, overlap 1151760 AGTTAAATAATTAAA AAACCACGTCT CGAT GGACGTGGTTA TTTTTTTAAATGTAT TERM 1197 1151779 - 1151760 - f 100 -9.3 -5.4148 | opp_overlap 1151757 1151760 TAAATAATTAAAAAA CCACGTC TCGATG GACGTGG TTATTTTTTTAAATG TERM 1198 1151760 - 1151779 + F 100 -10 -4.8236 | opp_overlap 1151760, overlap 1151757 TAAATAATTAAAAAA CCACGTCT CGAT GGACGTGG TTATTTTTTTAAATG TERM 1199 1152137 - 1152158 + F 70 -4.3 -4.95484 | opp_overlap 1152137, overlap 1152132 AATTCAAAACAAAAA GAGCCCCGT AATC ACGGAACTC TTTTGTTTGGTAATG TERM 1200 1152158 - 1152137 - f 100 -8.7 -5.49568 | opp_overlap 1152132 1152137 AATTCAAAACAAAAA GAGCCCCGT AATC ACGGAACTC TTTTGTTTGGTAATG TERM 1201 1152868 - 1152854 - f 70 -8.6 -2.64679 | overlap 1152853 1152851 AGCAATCGCAAATAC TGTGCA AGC TGCACA ACAACATGATAGTGT SA1018 1153089 - 1153775 + | hypothetical protein TERM 1202 1153871 - 1153832 - T 78 -6.6 -4.68506 | gap 1 AAGTAATTGTAAAAA CGACACTACGAA-AAGA TGCATTT TCATGCTCGTAGTGTCG AATATTATTATCTTA SA1019 1154324 - 1153884 - | hypothetical protein TERM 1203 1155287 - 1155272 - g 71 -3.3 -5.04987 | AAGATTTTGAAAAAA CATCA GTTGCT TGATG ATGCTTTTAGAGCAA SA1020 1154519 - 1156132 + | hypothetical protein TERM 1204 1156147 - 1156177 + F 100 -12.7 -6.28401 | overlap 1156148 ATATACCAAGGGTTT AGCCCGATTTATC TTAAT GATAAATCGGGCA TTTTTTTGTTTTTTA TERM 1205 1156148 - 1156176 + F 100 -16.2 -4.3155 | overlap 1156147 TATACCAAGGGTTTA GCCCGATTTATC TTAAT GATAAATCGGGC ATTTTTTTGTTTTTT SA1021 1156276 - 1156707 + | cell division protein MraZ SA1022 1156723 - 1157658 + | hypothetical protein ftsL 1157672 - 1158073 + | cell division protein TERM 1206 1158104 - 1158091 - g 78 -2.4 -5.66926 | opp_overlap 1158091 1158094 TTAAAAAAAATAAAA TAGG GGCAGT CCTA CTTGTTGGTTTATTC TERM 1207 1158094 - 1158128 + G 74 -2.1 -5.50925 | opp_overlap 1158091, overlap 1158091 AAAAAAATAAAATAG GGGCAGTCCTACT TGTTGGTTT ATTCGGACTGCTC TTTTTTATATTGGTT TERM 1208 1159837 - 1159827 - g 71 -5.4 -4.56914 | GTAGGTAAATCAAAA GATG ACA CATC TAATGCAGAGTATAG pbpA 1158054 - 1160288 + | penicillin-binding protein 1 mraY 1160580 - 1161545 + | phospho-N-muramic acid-pentapeptide translocase murD 1161547 - 1162896 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1209 1163060 - 1163050 - g 74 -5.4 -4.78077 | TCTAATCAAAATAAA GATG ATA CATC TCAACAAGCTGATTT TERM 1210 1163745 - 1163724 - g 75 -8.9 -3.40597 | opp_overlap 1163728 1163736, overlap 1163722 1163728 1163736 TGCTTTAGTGAAATA TAAAGGTAA ATAT TTACCTTTA TTAGAAAATGGTAAA div1b 1162912 - 1164231 + | hypothetical protein ftsA 1164337 - 1165749 + | cell division protein TERM 1211 1166113 - 1166127 + G 76 -10 -2.79023 | overlap 1166110 GTGGCGGAACTGGTA CTGGTG CAG CACCAG TCGTTGCTAAAATTG ftsZ 1165782 - 1166954 + | cell division protein FtsZ TERM 1212 1167013 - 1166991 - f 100 -12.2 -4.24397 | opp_overlap 1166991 ATAATTCAACACAAA TCATCAGATA ACA TATCTGATGA TTTTTTTACTAATTT TERM 1213 1166991 - 1167013 + F 100 -12.2 -5.5943 | opp_overlap 1166991 ATAATTCAACACAAA TCATCAGATA ACA TATCTGATGA TTTTTTTACTAATTT TERM 1214 1167444 - 1167426 - g 74 -3.1 -5.36441 | overlap 1167427 GTTTGATAGAAAAAA TTGGGTG TTTCC CATCCAA ACACATGAAAATAAA SA1030 1167214 - 1168005 + | hypothetical protein SA1031 1168023 - 1168697 + | hypothetical protein SA1032 1168694 - 1169257 + | hypothetical protein SA1033 1169269 - 1169559 + | hypothetical protein TERM 1215 1169574 - 1169604 + F 90 -8.3 -4.87037 | opp_overlap 1169574 AATTAAGCGACATAA CGAGGCAAGGGTA CATGA TACTTTAGCCTCG TTTTTGATATGTATT SA1034 1169810 - 1170448 + | hypothetical protein SA1035 1170472 - 1171089 + | hypothetical protein ileS 1171310 - 1174063 + | isoleucyl-tRNA synthetase SA1037 1174354 - 1175151 + | hypothetical protein tnp 1175424 - 1175212 - | putative transposase TERM 1216 1175256 - 1175289 + g 100 -14.9 -5.25893 | opp_overlap 1175256 TAGGCAATGTAAAAA GCTGATTTCTATTAA TTAT TTGATAGAAATCAGC TTTTTTGATATGTAT TERM 1217 1175289 - 1175256 - G 100 -12.7 -4.75174 | opp_overlap 1175256 TAGGCAATGTAAAAA GCTGATTTCTATTAA TTAT TTGATAGAAATCAGC TTTTTTGATATGTAT TERM 1218 1175314 - 1175333 + g 74 -5.8 -4.56314 | gap 1, opp_overlap 1175316, overlap 1175315 1175316 1175318 ATGTATTTTATAATG TA-CAGCTC GTT GAGCTGCTA TTTTCCTTATATTAA TERM 1219 1175330 - 1175316 - G 75 -10 -2.60079 | opp_overlap 1175315 1175314 1175316 1175318 GTATTTTATAATGTA CAGCTC GTT GAGCTG CTATTTTCCTTATAT TERM 1220 1175316 - 1175330 + g 76 -10 -2.91057 | opp_overlap 1175316, overlap 1175315 1175314 1175318 GTATTTTATAATGTA CAGCTC GTT GAGCTG CTATTTTCCTTATAT TERM 1221 1175708 - 1175753 + H 81 -7.1 -4.6526 | opp_overlap 1175710, overlap 1175710 ATTGTATAAATAGAG AACAGCAGTAAGATAATTTTT AATT AGAAAATATCTTACTACTGTC TTTTTAGGGATTTAT TERM 1222 1175751 - 1175710 - H 86 -9.7 -3.80279 | opp_overlap 1175708 1175710 TGTATAAATAGAGAA CAGCAGTAAGATAATTTTT AATT AGAAAATATCTTACTACTG TCTTTTTAGGGATTT TERM 1223 1175710 - 1175751 + H 90 -9.7 -3.9318 | opp_overlap 1175710, overlap 1175708 TGTATAAATAGAGAA CAGCAGTAAGATAATTTTT AATT AGAAAATATCTTACTACTG TCTTTTTAGGGATTT TERM 1224 1176159 - 1176175 + G 76 -6.7 -4.4634 | GGGGAATATTGAGTG GAAAAAT GAC ATTTTTC TTTATTATTACCATT lsp 1175975 - 1176466 + | lipoprotein signal peptidase SA1040 1176466 - 1177383 + | hypothetical protein TERM 1225 1177723 - 1177749 + F 100 -8.1 -5.72622 | opp_overlap 1177723 ATTGTATATACTAAA CCTCATGTC GATATTAAA GACATGAGG TTTTTTGTTTCTAAA TERM 1226 1177749 - 1177723 - f 79 -8.1 -3.88766 | opp_overlap 1177723 ATTGTATATACTAAA CCTCATGTC GATATTAAA GACATGAGG TTTTTTGTTTCTAAA pyrR 1177783 - 1178310 + | pyrimidine regulatory protein PyrR TERM 1227 1178471 - 1178498 + F 100 -10.1 -5.88565 | TTGTCACACTTTTTG TCTCTTTACAT ATACTG ATGTAAAGAGA TTTTTTTATTATCGG pyrP 1178528 - 1179835 + | uracil permease pyrB 1179863 - 1180744 + | aspartate carbamoyltransferase catalytic subunit pyrC 1180762 - 1182036 + | dihydroorotase pyrAA 1182038 - 1183138 + | carbamoyl phosphate synthase small subunit TERM 1228 1184086 - 1184067 - g 85 -8.6 -4.11216 | GCGTTAGCTTCAAAA GCAACAGG ATAT CCTATTGC AAAATTAGCTGCTAA carB 1183131 - 1186304 + | carbamoyl phosphate synthase large subunit pyrF 1186414 - 1187106 + | orotidine-5-phosphate decarboxylase pyrE 1187106 - 1187717 + | orotate phosphoribosyltransferase SA1049 1187747 - 1187959 + | hypothetical protein TERM 1229 1188225 - 1188235 + F 70 -4 -4.88228 | opp_overlap 1188225 TATCATTTATTAACA TATG TAT CATA TTTTTAATCTTGCGT SA1050 1188396 - 1188797 + | hypothetical protein TERM 1230 1188996 - 1189043 + T 100 -13.1 -3.86822 | gap 1, opp_overlap 1188996 1189000, overlap 1189000 GCATTAAATAATAAA TAAACACCTCG-CAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTGTTTA TTTGTCGACAACTTG TERM 1231 1189043 - 1188996 - T 100 -10.9 -4.60258 | gap 1, opp_overlap 1188996 1189000, overlap 1189000 GCATTAAATAATAAA TAAACACCTC-GCAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTGTTTA TTTGTCGACAACTTG TERM 1232 1189000 - 1189039 + T 100 -9.5 -4.55295 | gap 1, opp_overlap 1188996 1189000, overlap 1188996 TAAATAATAAATAAA CACCTCG-CAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTG TTTATTTGTCGACAA TERM 1233 1189039 - 1189000 - T 82 -7.3 -4.82212 | gap 1, opp_overlap 1189000 1188996, overlap 1188996 TAAATAATAAATAAA CACCTC-GCAAAAGAAAG TAGTC CTTTCTTATGGTGAGGTG TTTATTTGTCGACAA SA1051 1190757 - 1189060 - | hypothetical protein TERM 1234 1189543 - 1189586 + g 73 -7 -3.98762 | overlap 1189576 ATGATGTAATTGTTG TTCGATTGTTGAAAAATAAT CTAT ATTATCTTTCGTCAATTGAA TTTGATGTTGTAATT gmk 1191032 - 1191655 + | hypothetical protein SA1053 1191655 - 1191873 + | hypothetical protein TERM 1235 1191940 - 1191957 + F 100 -7.7 -5.75822 | opp_overlap 1191940 CATATCCAAATCAAA CGCACCT ATGT AGGTGTG TTTTTTTAGTTTATC SA1054 1192089 - 1193288 + | hypothetical protein priA 1193288 - 1195696 + | PriA, primosomal protein TERM 1236 1195779 - 1195828 + F 100 -9 -5.01546 | gap 1, opp_overlap 1195778 1195779 TAAGTACAGAAAAAG GGCAGAATATACAACTGTTAACT ATTTA AATTAGCAGTT-TATATTCTGTC TTTTTATATGGCTTT SA1056 1196202 - 1197155 + | hypothetical protein SA1057 1197521 - 1197318 - | hypothetical protein SA1058 1197820 - 1198308 + | hypothetical protein SA1059 1198301 - 1199236 + | methionyl-tRNA formyltransferase SA1060 1199155 - 1200540 + | hypothetical protein TERM 1237 1200582 - 1200566 - g 84 -5.2 -5.45802 | TGCTGAAAAGAAAAA GAAGAA TAAAT TTCTTC CAAATTTTGACAAGC TERM 1238 1200674 - 1200663 - g 71 -3 -5.10208 | CAAGGTCAACAAAAA TTTC GAGC GAAA CAGATTTTTGAATGG SA1061 1200543 - 1201637 + | hypothetical protein SA1062 1201644 - 1202387 + | hypothetical protein TERM 1239 1202553 - 1202543 - g 71 -5.4 -4.55446 | GAAGAAACATTAAAA CGTT TTG AACG AGAAGTACATAACTC SA1063 1202384 - 1204378 + | protein kinase TERM 1240 1204397 - 1204426 + F 100 -10.1 -5.09762 | opp_overlap 1204399 TAATTGAAGTAAATG TACCGAGGTTTCT ATTT GGAAGTCTCGGTA TTTTTATGTTGAGAT SA1064 1204606 - 1205481 + | hypothetical protein cfxE 1205482 - 1206126 + | hypothetical protein TERM 1241 1206583 - 1206571 - g 72 -4.9 -4.65838 | CATACAGTTGAAAAA GATAA GAG TTATC CGTACATTTCATTTA SA1066 1206133 - 1206774 + | hypothetical protein TERM 1242 1206866 - 1206905 + T 74 -8.1 -3.61398 | overlap 1206870 TAACATAATAATAGA TGAATCACGCTGTAATT AATGAA GATTATGGCGTGATTTA TTATTGGAAGGAAAA TERM 1243 1206870 - 1206901 + T 76 -6.7 -4.44667 | overlap 1206866 ATAATAATAGATGAA TCACGCTGTAATT AATGAA GATTATGGCGTGA TTTATTATTGGAAGG TERM 1244 1207075 - 1207100 + T 81 -10.6 -3.09491 | opp_overlap 1207075, overlap 1207078 TTGGTAACAAAAAAA GAACTAAGAG GTTGAG CTCTTAGTTC TTAAGTAAATGTGTC TERM 1245 1207100 - 1207075 - T 100 -10.6 -5.7946 | opp_overlap 1207075 1207078 TTGGTAACAAAAAAA GAACTAAGAG GTTGAG CTCTTAGTTC TTAAGTAAATGTGTC TERM 1246 1207110 - 1207132 + T 74 -3.4 -5.37043 | opp_overlap 1207110 TAGTTCTTAAGTAAA TGTGTCCT CCACATA AGGTCACA TTTTTTATGTGCAAT rpmB 1207343 - 1207155 - | 50S ribosomal protein L28 SA1068 1207786 - 1208160 + | hypothetical protein SA1069 1208175 - 1209821 + | hypothetical protein TERM 1247 1209826 - 1209879 + F 95 -11.6 -3.84363 | gap 1, opp_overlap 1209839, overlap 1209839 CAGTAGAATAAAAAT TTAAAATAAAAAACTACCAA-TGAT AAATC ATCAGTTGGTAGTTTTTTATTTTGC TATTTTAGTGTTATT TERM 1248 1209866 - 1209839 - f 95 -7.2 -5.80951 | gap 1, opp_overlap 1209826 1209839 ATTTAAAATAAAAAA CTACCAA-TGATA AAT CATCAGTTGGTAG TTTTTTATTTTGCTA TERM 1249 1209839 - 1209866 + F 95 -6.5 -5.83211 | gap 1, opp_overlap 1209839, overlap 1209826 ATTTAAAATAAAAAA CTACCAA-TGAT AAATC ATCAGTTGGTAG TTTTTTATTTTGCTA recG 1210011 - 1212071 + | ATP-dependent DNA helicase SA1071 1212289 - 1212846 + | fatty acid biosynthesis transcriptional regulator plsX 1212851 - 1213837 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1250 1214710 - 1214694 - g 73 -8.1 -3.65523 | opp_overlap 1214696 AAAAAAATAAATAGA GATGTTA AGT TAACATC AATTCAAACTTTAGA fabD 1213830 - 1214756 + | malonyl CoA-acyl carrier protein transacylase fabG 1214743 - 1215483 + | 3-oxoacyl-reductase, acyl-carrier protein TERM 1251 1215515 - 1215556 + F 73 -8.2 -3.53343 | gap 1 CTCATTGACGCAGTG GTTGACT-GGTCATCCAAT GGAGA ATTGTCTGACCTAGTCAAC TTTGCGGGGGAAATT TERM 1252 1215833 - 1215802 - f 95 -11.8 -3.37071 | opp_overlap 1215797 1215806, overlap 1215806 AAAGCTCATGCATAA GAAACACTAATCAA TAAA TTGATAAGTGTTTC TAAAATTTCTACTTG TERM 1253 1215806 - 1215829 + F 71 -6.8 -3.96291 | opp_overlap 1215806 1215802, overlap 1215797 CTCATGCATAAGAAA CACTAATCAA TAAA TTGATAAGTG TTTCTAAAATTTCTA TERM 1254 1215829 - 1215806 - f 74 -6.8 -4.33417 | opp_overlap 1215797 1215806, overlap 1215802 CTCATGCATAAGAAA CACTAATCAA TAAA TTGATAAGTG TTTCTAAAATTTCTA hmrB 1215918 - 1216151 + | acyl carrier protein TERM 1255 1216164 - 1216189 + F 100 -9.7 -6.01187 | TAATAAATCTTACAT CTGGGTCGTCA GTAT TGTCGACTCAG TTTTTTTCTTTAATT rnc 1216267 - 1216998 + | RNase III smc 1217145 - 1220711 + | chromosome segregation SMC protein SA1078 1220711 - 1221961 + | signal recognition particle SA1079 1221948 - 1222280 + | hypothetical protein ffh 1222306 - 1223673 + | hypothetical protein TERM 1256 1223711 - 1223759 + F 100 -9.2 -4.65895 | gap 1, opp_overlap 1223711 1223725, overlap 1223713 TTTGTTGCAATGAGA TGTGCATCCCG-AAAGTTATACT AAAG AATATAACTTTATGGGGTGCATA TTTTTAGATACACAA TERM 1257 1223713 - 1223757 + F 90 -9.6 -3.94812 | gap 1, opp_overlap 1223711 1223725, overlap 1223711 TGTTGCAATGAGATG TGCATCCCG-AAAGTTATACT AAAG AATATAACTTTATGGGGTGCA TATTTTTAGATACAC rpsP 1224108 - 1224383 + | 30S ribosomal protein S16 TERM 1258 1224389 - 1224375 - f 70 -4.3 -4.90302 | opp_overlap 1224384, overlap 1224384 GACGAACAAAAGAAA GCTAA GTAAT TTAGC GTAAAATTGTTCTAA TERM 1259 1224488 - 1224506 + F 100 -11 -5.33026 | AATATAGAACGTATT GGGTACCA TAA TGGTGCCC TTTTTCTTTGAATTA rimM 1224571 - 1225074 + | 16S rRNA processing protein trmD 1225074 - 1225811 + | tRNA-(guanine-N1)-mehtyltransferase rplS 1225914 - 1226264 + | 50S ribosomal protein L19 TERM 1260 1226352 - 1226316 - T 85 -8.1 -4.58585 | opp_overlap 1226316 GACTCAAACAATAAA GCCATCTAGGTCACT TTTATGG AGTGATATAGATGGC TTTTTTTGCTGTTTA TERM 1261 1226316 - 1226352 + T 100 -11.7 -5.66989 | opp_overlap 1226316 GACTCAAACAATAAA GCCATCTAGGTCACTTT TAT GGAGTGATATAGATGGC TTTTTTTGCTGTTTA TERM 1262 1226450 - 1226482 + T 77 -7.2 -4.24285 | gap 1, opp_overlap 1226450 TTATATAAACAAAAA TCTACTAAGTGCCAT TGAA AAGG-ACTTAGTAGA TTTATTAAATATATG TERM 1263 1226482 - 1226450 - T 90 -7.2 -5.42975 | gap 1, opp_overlap 1226450 TTATATAAACAAAAA TCTACTAAGTGCCAT TGAA AAGG-ACTTAGTAGA TTTATTAAATATATG SA1085 1229114 - 1226508 - | hypothetical protein rbgA 1229515 - 1230399 + | ribosomal biogenesis GTPase rnhB 1230383 - 1231150 + | RNase HII sucC 1231259 - 1232425 + | succinyl-CoA synthetase subunit beta sucD 1232447 - 1233355 + | succinyl-CoA synthetase subunit alpha TERM 1264 1233381 - 1233421 + F 100 -13 -3.9712 | gap 2, opp_overlap 1233376 1233375 TGATATAAATGGCTA TAGCCCA-TTCC-ATACTTT ATA AAAGTATCGGAAATGGGCTA TTTGTCGTGCAATGA TERM 1265 1234215 - 1234203 - g 74 -5.5 -4.77757 | GGTCAAAAATTAAAA GTGCC AAT GACAC CATTAGTAGAACCAA lytN 1233582 - 1234700 + | LytN protein TERM 1266 1235110 - 1235096 - g 72 -5.8 -4.35483 | TGGTAGGATAATAAA GAATTA TAA TAATTC AGTGATAGTAAAGAT fmhC 1234728 - 1235972 + | FmhC protein SA1092 1236145 - 1237017 + | hypothetical protein TERM 1267 1237435 - 1237416 - g 93 -7.2 -5.54264 | AAACATGCAAAAAAA GCGAAAAA CGTC TTTCTCGC AAGTGACCCCGACCG SA1093 1237197 - 1239266 + | DNA topoisomerase I gid 1239422 - 1240729 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1268 1241738 - 1241751 + G 79 -5.3 -5.093 | TTCAAACCAATTCAG TCATG CAAT CATGA TTTTCTTATTTTAAA xerC 1241147 - 1242043 + | hypothetical protein clpQ 1242040 - 1242585 + | ATP-dependent protease peptidase subunit TERM 1269 1243801 - 1243787 - g 77 -8.6 -3.63901 | overlap 1243785 ATTAATTAAACAATA TGAAGC ATT GCTTCA AACAGAAGAAGTTAC hslU 1242651 - 1244054 + | ATP-dependent protease ATP-binding subunit codY 1244079 - 1244852 + | transcriptional repressor CodY TERM 1270 1244923 - 1244956 + F 83 -6.9 -5.01422 | AGTAGTCAACTCAAC GAAATGACTTTGATG ATTA TGTTGAAGTCATTTC TTTATTTTTGTCTAA rpsB 1245199 - 1245966 + | 30S ribosomal protein S2 TERM 1271 1246003 - 1246029 + F 85 -7.5 -5.00616 | gap 1, opp_overlap 1246002 GATATAGTTTAAATG GGTGATAAG-AT ATTA ATGCTTATCACC TTTTTTAAAAAGAAA TERM 1272 1247002 - 1246985 - g 74 -5.5 -4.68424 | GAAGGTATGGAAAAA CGCGAAG AAAA CTTTGCG GATGAAGTTAAAGGA tsf 1246148 - 1247029 + | elongation factor Ts TERM 1273 1247251 - 1247235 - g 77 -5.2 -4.84359 | TTAGCTGGAGAAAAA GGATTT GGCAT AAATCC AGTAATTATTAAAAG smbA 1247166 - 1247888 + | uridylate kinase frr 1247907 - 1248461 + | ribosome recycling factor TERM 1274 1248701 - 1248726 + F 100 -7.7 -6.01187 | gap 1, opp_overlap 1248701 CATTTCTGGTGTAAA CTGTACC-GAGT CAG ACTTTGGTACAG TTTTTTTATTTGCTT TERM 1275 1248882 - 1248863 - g 70 -4.4 -4.78345 | AATAAATAAAAAGAA CACTATAA ATAA TTATAATG AAGAATTAGACTCGT uppS 1248834 - 1249604 + | undecaprenyl pyrophosphate synthetase cdsA 1249611 - 1250393 + | phosphatidate cytidylyltransferase TERM 1276 1250423 - 1250459 + F 70 -6.1 -4.1585 | gap 1, opp_overlap 1250421 1250423 CAATAAACGTAAAGA GGAGTTGCTGAGAT AATTTAATGA ATCTCAG-AACTCC TTTTGAAAATTATAC SA1105 1250605 - 1251891 + | hypothetical protein proS 1251911 - 1253614 + | prolyl-tRNA synthetase TERM 1277 1256504 - 1256494 - g 73 -4 -5.08824 | CGTTTAGTTAAAAAA TCAT TAG ATGA TGGATACTTAGTTGG polC 1253872 - 1258188 + | DNA polymerase III PolC TERM 1278 1258430 - 1258448 + F 100 -11 -4.78848 | opp_overlap 1258430 TGAACTCAGGCAGAA GAGTGGGA GAT TCCCGCTC TTTTCTATTTGCCAA TERM 1279 1258448 - 1258430 - f 74 -8.8 -3.3785 | opp_overlap 1258430 TGAACTCAGGCAGAA GAGTGGGA GAT TCCCGCTC TTTTCTATTTGCCAA SA1108 1258478 - 1258945 + | hypothetical protein nusA 1258966 - 1260141 + | transcription elongation factor NusA TERM 1280 1260190 - 1260178 - g 95 -4.1 -6.20267 | TGAAAAAGAAAAAAA TTCCG ATG CGAAA ATGTATTCTTTCAAA SA1110 1260162 - 1260446 + | hypothetical protein SA1111 1260443 - 1260760 + | hypothetical protein infB 1260765 - 1262882 + | translation initiation factor IF-2 TERM 1281 1262921 - 1262973 + F 95 -11.8 -3.80862 | TATAGTTAAGATTGA TATGCTCCCTATAAA-TATTGCACTT TTT AAGTGTC-TACTTTATAGGGAGCATA TTTGATACTAGCTTT rbfA 1263268 - 1263618 + | ribosome-binding factor A truB 1263787 - 1264704 + | tRNA pseudouridine 5S synthase ribC 1264719 - 1265690 + | riboflavin kinase / FAD synthase ribC rpsO 1265805 - 1266074 + | 30S ribosomal protein S15 TERM 1282 1266091 - 1266124 + F 100 -11.9 -4.1891 | CTTAATATAACGTCT TTGAGGTTGGGGCAT ATTT ATGTTCCAACCTTAA TTTATATTAAAAAAG TERM 1283 1266471 - 1266461 - g 70 -4 -4.87892 | TCTCAAGAAAAGAAA GTTT TTA AAAC TGAATGGGCAGGAAG pnpA 1266443 - 1268539 + | polynucleotide phosphorylase/polyadenylase TERM 1284 1268577 - 1268549 - f 76 -9.7 -2.88032 | opp_overlap 1268549, overlap 1268548 GAATAATATTTAAAG TCATATGACGACA ATG TATCGTCATGTGA TTTTTTTATGCCATT TERM 1285 1268549 - 1268577 + F 100 -9.7 -5.63504 | opp_overlap 1268548 1268549 GAATAATATTTAAAG TCATATGACGACA ATG TATCGTCATGTGA TTTTTTTATGCCATT TERM 1286 1268808 - 1268795 - g 79 -3.9 -5.47159 | TTTAATAAAGAAAAA GAATA AAGA TATTC GCATTATACCATTAG SA1118 1268775 - 1270448 + | hypothetical protein TERM 1287 1270502 - 1270514 + F 70 -6.3 -4.13911 | ACCGAAATATAATGG TTGTC ATG GACAA TTTACTTATATTTTA spoIIIE 1270705 - 1273071 + | hypothetical protein TERM 1288 1273166 - 1273142 - g 74 -5.7 -4.6951 | opp_overlap 1273141 ATTATGCAAAATAAA TTGGAATATGG TGA CCAACTTCCAA GTAATTTATCAATTG SA1120 1273076 - 1273789 + | hypothetical protein SA1121 1273820 - 1275085 + | hypothetical protein TERM 1289 1275673 - 1275685 + G 71 -3.4 -5.18297 | overlap 1275677 GAAACGTTTTATCAT CCAT CAAAT ATGG TTTTATTTGTTGTTG SA1122 1275085 - 1276371 + | hypothetical protein SA1123 1276371 - 1277075 + | hypothetical protein SA1124 1277180 - 1278007 + | hypothetical protein SA1125 1278026 - 1278418 + | hypothetical protein TERM 1290 1278928 - 1278944 + G 74 -5.2 -4.80959 | GGCAACATTGATTGG TTTGTC ATTAG GACAAA TTTTATTATACATTG pgsA 1278452 - 1279030 + | phosphatidylglycerophosphate synthase TERM 1291 1279044 - 1279071 + F 95 -7.9 -5.52384 | AAATATTTGTTTATA CTAGATTTCAT TTTCAT ATGGAATCTAG TTTTTTTAATCCCAA TERM 1292 1279123 - 1279137 + F 73 -5.8 -4.54301 | opp_overlap 1279123 1279125 TTGTTTATAATGATA TATTGT AAA ACAATA TTTGTTCATTTTTTA cinA 1279254 - 1280405 + | competence-damage inducible protein cinA recA 1280570 - 1281613 + | recombinase A SA1129 1281967 - 1283526 + | phosphodiesterase TERM 1293 1283533 - 1283558 + T 100 -9 -5.1925 | overlap 1283534 GCGAAATAATTTTTG TCTCCCTCAC AAATTA GTGAGGGAGC TTTTTTAAGTTGTAG TERM 1294 1283534 - 1283557 + T 100 -12.5 -3.70465 | overlap 1283533 CGAAATAATTTTTGT CTCCCTCAC AAATTA GTGAGGGAG CTTTTTTAAGTTGTA TERM 1295 1283788 - 1283760 - T 100 -17.7 -5.5604 | opp_overlap 1283753 1283763 1283768 CTAACCAATAAAAAA GAAGAGAAGATGT AAC ACATCTTCTCTTC TGCAATATTAATTAG TERM 1296 1283763 - 1283785 + T 100 -13.6 -3.37028 | opp_overlap 1283760, overlap 1283753 1283768 ACCAATAAAAAAGAA GAGAAGATGT AAC ACATCTTCTC TTCTGCAATATTAAT SAS037 1283993 - 1283823 - | hypothetical protein TERM 1297 1284560 - 1284539 - g 70 -7.3 -3.89302 | ATTAATGATATTAAA CTTGCAGTT ATTA ATCTGCAAG GAAGAGCGTTTATGC SA1130 1284212 - 1285009 + | hypothetical protein TERM 1298 1285069 - 1285100 + F 86 -7.4 -5.25772 | gap 1, opp_overlap 1285067 1285069 1285072, overlap 1285072 TATGAATTTAATATA GTACCACTG-TTTAC ATA GTAAATCGGTGGTTC TTTTTGTTATCATTT TERM 1299 1285072 - 1285097 + F 83 -7.7 -4.68512 | gap 1, opp_overlap 1285072 1285069 1285067, overlap 1285069 GAATTTAATATAGTA CCACTG-TTTAC ATA GTAAATCGGTGG TTCTTTTTGTTATCA SA1131 1285149 - 1286909 + | hypothetical protein SA1132 1286910 - 1287776 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TERM 1300 1287832 - 1287786 - f 73 -6 -4.56736 | opp_overlap 1287786, overlap 1287781 ATTTAATAATTAAAA CTGAGTCGTATAAATGTATTTA TAA CAGATCCATTTATGCTACTCAG TTTTTTACTATTACA TERM 1301 1287786 - 1287832 + F 100 -9.7 -5.27779 | opp_overlap 1287781 1287786 ATTTAATAATTAAAA CTGAGTCGTATAAATGTATTT ATAAC AGATCCATTTATGCTACTCAG TTTTTTACTATTACA SA1133 1287870 - 1288163 + | hypothetical protein SA1134 1288297 - 1289841 + | hypothetical protein SA1135 1289842 - 1290207 + | hypothetical protein SA1136 1290234 - 1290725 + | hypothetical protein TERM 1302 1291152 - 1291136 - g 70 -8 -3.16055 | GAAATGTTTTATGAA GATGCC AAGGA GGCATC ACGTGTACTTGAAAT mutS 1291028 - 1293646 + | DNA mismatch repair protein TERM 1303 1294203 - 1294185 - g 77 -9.6 -3.05819 | overlap 1294188 CAGATATTGTCAATA GAATGGCT ATG AGCCATCC GGACATTCGAATAGC TERM 1304 1294200 - 1294188 - g 71 -7.7 -3.67052 | overlap 1294185 ATATTGTCAATAGAA TGGCT ATG AGCCA TCCGGACATTCGAAT TERM 1305 1294454 - 1294438 - g 70 -3.8 -4.85129 | ACGATACATTAAAAA CTTTAT GCTAA ATAAAG CGATTTTAGAAGGCT TERM 1306 1294991 - 1294977 - g 70 -7.2 -3.83771 | overlap 1294968 AAGAAATGGATCAAA CATTTG ATT CAAATG AGGATGCATCTGTGC mutL 1293659 - 1295668 + | DNA mismatch repair protein glpP 1295683 - 1296216 + | glycerol uptake operon antiterminator regulatory protein SAS038 1296342 - 1296253 - | hypothetical protein TERM 1307 1296349 - 1296388 + H 84 -8.9 -4.24342 | gap 1, opp_overlap 1296345 1296342 1296340 AAATAACATAATTAG CACCTCTAAAACGATTAA AATCA TTAAA-GTTTTAGAGGTG TTTATTAGTAAAAAA glpF 1296691 - 1297509 + | glycerol uptake facilitator TERM 1308 1299052 - 1299042 - g 82 -5.4 -5.25772 | AAATTAGAAGAAAAA TTCG ATC CGAA AATGGATGAAGGCGA glpK 1297638 - 1299134 + | glycerol kinase TERM 1309 1299204 - 1299262 + F 100 -9.9 -4.95854 | gap 1, opp_overlap 1299204 ATTTGAATCGAGAAA CGAGAGATTTGTTCGAACATGTACAATT GAAG GATTGTTTATGTG-GGACAAGTCTCTCG TTTTTACATTTTTTA TERM 1310 1299736 - 1299725 - g 71 -3 -5.0666 | overlap 1299726 TATCTAAAAAAGAAA CTTT AGCT AAAG AACCATTAGTTAAAA TERM 1311 1300237 - 1300253 + G 70 -8.1 -3.19522 | opp_overlap 1300236 1300233 GAAGACAGAGACTAT TTAATCG ATG CGATTAA TTACATGTTCCCTAG glpD 1299244 - 1300965 + | aerobic glycerol-3-phosphate dehydrogenase TERM 1312 1300986 - 1301011 + F 95 -7.6 -5.60993 | opp_overlap 1300986 TTGTACAATCATAAA CTGGTGTCCT GTTTTA AGGGCATCAG TTTTTTTATACGAGA TERM 1313 1301658 - 1301644 - g 91 -4.3 -5.7946 | GTTTTAATAAAAAAA TACGT CCATT ACGTA CACAAAGTGATTGGA SA1143 1301115 - 1302029 + | hypothetical protein miaA 1302047 - 1302982 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1314 1303128 - 1303111 - g 77 -8.5 -3.67597 | opp_overlap 1303103 GGTGTTATTGAAGAA TACGACA AGTA TGTCGTA AGCTTAAATTCTCAA SA1145 1302997 - 1303230 + | hypothetical protein TERM 1315 1303425 - 1303376 - T 100 -13.2 -5.06414 | gap 1, opp_overlap 1303376 TGTTTGTAATAAAAA CGCTTCATATAAAGGTCGAGTCA ATATA TGATACGAC-TTTATATGAAGCG TTTTATTTGCTATGA TERM 1316 1303376 - 1303425 + T 100 -15.4 -4.97158 | gap 1, opp_overlap 1303376 TGTTTGTAATAAAAA CGCTTCATATAAAGGTCGAGTCA ATATA TGATACGAC-TTTATATGAAGCG TTTTATTTGCTATGA bsaA 1303928 - 1303452 - | glutathione peroxidase SA1147 1304040 - 1305278 + | hypothetical protein SA1148 1305297 - 1306535 + | hypothetical protein glnR 1306778 - 1307146 + | glutamine synthetase repressor glnA 1307165 - 1308505 + | glutamine-ammonia ligase TERM 1317 1308541 - 1308565 + F 100 -9.3 -5.37593 | opp_overlap 1308541 AATCAGTAATATCAA GGGCTAGAGCG TTT TGCTTTAGCTC TTTTTTGATTTGGAA TERM 1318 1308919 - 1308903 - f 75 -4.5 -5.15682 | opp_overlap 1308903 AAAAGAGAAACAAAA CAAAAAA TAT CTTTTTG TTTATCGATCGGTAT TERM 1319 1309754 - 1309731 - f 100 -9.6 -4.56597 | TCGTTCTTTTAAAAA GGTAAAGGGC AAAA GACCTTTACC ACATTAAATAGGGAG TERM 1320 1310220 - 1310210 - f 81 -2.6 -5.7827 | opp_overlap 1310210 AATATAAATAAAAAA TTAT CAA ATAA TATAATATAGAATAT TERM 1321 1310292 - 1310273 - f 76 -2.9 -5.62045 | ATATATAATAAAAAA CCAATAC TATTAG GTATTAG TTTATGAATTAACAA SA1151 1310400 - 1310606 + | hypothetical protein SA1152 1311840 - 1312025 + | hypothetical protein SA1153 1312768 - 1313019 + | hypothetical protein SAS039 1313742 - 1313936 + | hypothetical protein TERM 1322 1314357 - 1314319 - T 78 -6.3 -4.74013 | gap 1, opp_overlap 1314324, overlap 1314324 TTTAAATATATAAAA TAAAACAAGATACT-CAA TAAT CTGTAGTATCTTGTTTTG GAATAATGTAATTTT TERM 1323 1314352 - 1314324 - T 82 -6.2 -5.24647 | gap 1, opp_overlap 1314324, overlap 1314319 ATATATAAAATAAAA CAAGATACT-CAA TAAT CTGTAGTATCTTG TTTTGGAATAATGTA SA1154 1315505 - 1314480 - | hypothetical protein SAS040 1315775 - 1315972 + | hypothetical protein TERM 1324 1315981 - 1316010 + F 91 -10.9 -3.85698 | overlap 1315985 TAAATAATATGATGT GAAAGGTGCAAAA TGTT TTTTGTGCCTTTC TTTATAGGAGAAAAG TERM 1325 1315985 - 1316006 + F 73 -5.9 -4.55295 | overlap 1315981 TAATATGATGTGAAA GGTGCAAAA TGTT TTTTGTGCC TTTCTTTATAGGAGA TERM 1326 1316750 - 1316735 - g 71 -3.2 -5.06585 | overlap 1316736 GAAATCATAGAAAAA TCATCG TAAT CGATGG TCAACTAGGTTATGT SA1155 1315993 - 1317510 + | hypothetical protein TERM 1327 1317523 - 1317543 + F 86 -6.1 -5.45802 | TAATTTATTTGTAAG GAGTCTCGA TTA TAGAGGCTC TTTTTATTTTGCCCA SA1156 1317694 - 1318593 + | hypothetical protein SA1157 1318562 - 1319293 + | hypothetical protein TERM 1328 1319334 - 1319312 - g 71 -6.4 -4.17491 | ATGAAATTTTTAAAA GATACTTCAA TTG CTGAAATATC GTCTATACTTTATCT SA1158 1319297 - 1320388 + | hypothetical protein SA1159 1320385 - 1320987 + | hypothetical protein SAS041 1321288 - 1321100 - | hypothetical protein nuc 1321427 - 1321960 + | thermonuclease TERM 1329 1322047 - 1322102 + T 100 -9.4 -4.44548 | gap 1, opp_overlap 1322047 1322052 ATATAAAGAAATAAT TTAAAGGCATAATAA-CCATAGTGC GTATCGA GCGTAATGGATTATTATGCCTTTGA TTTTACTTGAATATA SA1161 1322959 - 1322105 - | hypothetical protein TERM 1330 1323362 - 1323374 + G 74 -5.5 -4.69053 | AAATTTCACGGTGAA GTTGC CAT GCAGC TTTTCTTAAATGATG SA1162 1323275 - 1323865 + | hypothetical protein TERM 1331 1323867 - 1323916 + T 73 -8.2 -3.51785 | gap 1, opp_overlap 1323872, overlap 1323872 CAATAAATAATTAAG AAAAAGCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGCTTTTA TATTAGTTTTTATCA TERM 1332 1323911 - 1323872 - T 93 -8.1 -5.23396 | gap 1, opp_overlap 1323872 1323867 AATAATTAAGAAAAA GCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGC TTTTATATTAGTTTT TERM 1333 1323872 - 1323911 + T 87 -8.1 -4.77629 | gap 1, opp_overlap 1323872, overlap 1323867 AATAATTAAGAAAAA GCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGC TTTTATATTAGTTTT SA1163 1325301 - 1323919 - | aspartate kinase TERM 1334 1325141 - 1325156 + g 72 -6.2 -4.29905 | opp_overlap 1325140 1325141 ACCTTTTCATATAAT CTGATT AACA AATCAG TTGTTTTAATATCAT dhoM 1325492 - 1326772 + | homoserine dehydrogenase thrC 1326778 - 1327839 + | threonine synthase TERM 1335 1327880 - 1327897 + G 73 -7 -4.04576 | opp_overlap 1327880 1327878 ATTCCTGCATCAACA GCCAAC CTTGGA GTTGGC TTTGATTCTATAGGT thrB 1327841 - 1328755 + | homoserine kinase SA1167 1328813 - 1329616 + | hypothetical protein TERM 1336 1329675 - 1329626 - T 70 -6 -4.26189 | gap 1, opp_overlap 1329629, overlap 1329629 TTATAAATTTTAAAA TAAGCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGCTTT TTATTTATGTGAAAA TERM 1337 1329672 - 1329629 - T 79 -7.7 -4.2354 | gap 1, opp_overlap 1329629, overlap 1329626 TAAATTTTAAAATAA GCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGC TTTTTATTTATGTGA TERM 1338 1329629 - 1329672 + T 100 -9.9 -5.42975 | gap 1, opp_overlap 1329629 1329626 TAAATTTTAAAATAA GCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGC TTTTTATTTATGTGA SA1168 1330223 - 1329909 - | hypothetical protein TERM 1339 1330428 - 1330392 - R 100 -13.1 -4.79223 | overlap 1330393 TTACACCATTAAAAA GCGGCAAATGCTATAGA TAA TCTAAAGCATCTGCCGT GTAAGAATTTATTTA TERM 1340 1330427 - 1330393 - R 100 -16.6 -3.46811 | overlap 1330392 TACACCATTAAAAAG CGGCAAATGCTATAGA TAA TCTAAAGCATCTGCCG TGTAAGAATTTATTT SA1169 1331895 - 1330441 - | gamma-aminobutyrate permease TERM 1341 1330682 - 1330707 + g 74 -5.5 -4.67552 | gap 1 AAAGGTGCTTTATAT GGT-AGGACCTT ATT AGGGTCTTGACC TTGTTTTTTAATAGC katA 1332093 - 1333616 + | catalase rpmG 1333707 - 1333856 + | 50S ribosomal protein L33 TERM 1342 1333892 - 1333922 + F 93 -8.2 -5.28826 | opp_overlap 1333892 CGATTTGAAAATAAA GCGGGCTTACCTAT TAT ATTGGGGAGCTCGC TTTTTTATGAAATTT TERM 1343 1334269 - 1334283 + F 71 -7.2 -3.73224 | opp_overlap 1334269 GTGTTATTATATAAA TCGTAA TAA TTACGA TTTGATAAAAAGTGA TERM 1344 1334283 - 1334269 - f 75 -7.2 -4.08706 | opp_overlap 1334269 GTGTTATTATATAAA TCGTAA TAA TTACGA TTTGATAAAAAGTGA rpsN 1334310 - 1334579 + | 30S ribosomal protein S14 TERM 1345 1334645 - 1334692 + F 79 -10.2 -2.90349 | opp_overlap 1334651, overlap 1334651 1334687 AGTATATACGAATGC TATAAACTGAATGTTTTCTCAT ATTA ATAAGGAAACATTCGGTTTTTA ATTTGCATTTAAAAA TERM 1346 1334686 - 1334651 - f 71 -7 -3.93236 | opp_overlap 1334651 1334645 TACGAATGCTATAAA CTGAATGTTTTCTCAT ATTA ATAAGGAAACATTCGG TTTTTAATTTGCATT TERM 1347 1334651 - 1334686 + F 100 -9.2 -5.01042 | opp_overlap 1334651, overlap 1334645 TACGAATGCTATAAA CTGAATGTTTTCTCAT ATTA ATAAGGAAACATTCGG TTTTTAATTTGCATT SA1172 1334736 - 1335713 + | guanosine 5'-monophosphate oxidoreductase TERM 1348 1336685 - 1336661 - g 84 -5.9 -5.36441 | opp_overlap 1336661 TGGTCACAGAAAAAA TATTTTAAATG ATA CGTTTAAAATA TTAGGTGTTGGTGTT TERM 1349 1336661 - 1336685 + G 70 -8.1 -3.21464 | opp_overlap 1336661 TGGTCACAGAAAAAA TATTTTAAATG ATA CGTTTAAAATA TTAGGTGTTGGTGTT SA1173 1335735 - 1336751 + | hypothetical protein TERM 1350 1336896 - 1336925 + T 100 -15.1 -4.65153 | opp_overlap 1336895 1336894 AAAAAATAATAATGG CTCGCTCCTGTAA ATTA TTACGGGGGCGAG TTTTAATTTGTGTAA TERM 1351 1337071 - 1337043 - T 100 -13.3 -5.14682 | TTAGAATAAATAAAA CCTCTTGAAAACG AAA CTTTTTCAAGAGG TCCAAAATTTATAAA lexA 1337754 - 1337131 - | LexA repressor SA1175 1337897 - 1338130 + | hypothetical protein TERM 1352 1338144 - 1338173 + F 91 -5.1 -5.9003 | GATACATTGTCACAA CGTTATTTTGC CTATTTTT GCGAAATAGCG TTTTTTTATTACTTT SA1176 1338267 - 1338506 + | hypothetical protein TERM 1353 1338547 - 1338565 + F 74 -3.2 -5.46706 | opp_overlap 1338549, overlap 1338549 GACATTATAACTTGA AATAAGTA TTT TACTTATC TTTTTATTTTAAAAT TERM 1354 1338549 - 1338563 + F 71 -5.8 -4.3613 | opp_overlap 1338549, overlap 1338547 CATTATAACTTGAAA TAAGTA TTT TACTTA TCTTTTTATTTTAAA tkt 1338627 - 1340615 + | transketolase TERM 1355 1340643 - 1340671 + F 83 -9 -4.1964 | overlap 1340646 AAGCGAGTATGTTTA GAAGTCTAGGAT GCATA ATCTTAGGCTTC TTTTAAAGTGTTGAA SA1178 1340893 - 1341135 + | hypothetical protein TERM 1356 1341150 - 1341180 + F 100 -9.9 -4.91511 | gap 1, opp_overlap 1341148 1341152 AATTCGCAATTGATA GAGGCTATTTTCCA GATA TGGAAA-TGGCCTC TTTTTATAATCAAAT SA1179 1341314 - 1341781 + | hypothetical protein SA1180 1341905 - 1343026 + | hypothetical protein TERM 1357 1343561 - 1343547 - g 79 -8.6 -3.78436 | AAGGGATATTAAGAA CACTGT TTG ACAGTG AAAAATTTGAAGCTA TERM 1358 1344030 - 1344018 - g 76 -6.3 -4.59424 | AAATTGAAACTAAAA TTGCT AAT AGCAA AAAAGATATTTCTAA SA1181 1343030 - 1346059 + | hypothetical protein mscL 1346492 - 1346130 - | large-conductance mechanosensitive channel TERM 1359 1347259 - 1347269 + G 71 -3.2 -5.11112 | TGATAAAGTAGAAGG TCCT ATT GGGA TTTTTATTGACGTTT opuD 1346696 - 1348342 + | glycine betaine transporter TERM 1360 1348369 - 1348412 + F 100 -12.8 -4.96501 | gap 1, opp_overlap 1348369 1348372 TAAGTATTTAAATAA CAAGTAGTATGTC-ATTCTAG TAG CTAGAACAGATATACTACTTG TTTGTTTTTGTGGAA TERM 1361 1348412 - 1348369 - f 100 -12.8 -3.98745 | gap 1, opp_overlap 1348369, overlap 1348372 TAAGTATTTAAATAA CAAGTAGTATGTC-ATTCTAG TAG CTAGAACAGATATACTACTTG TTTGTTTTTGTGGAA TERM 1362 1348409 - 1348372 - f 83 -8.7 -4.10744 | gap 1, opp_overlap 1348369, overlap 1348369 GTATTTAAATAACAA GTAGTATGTC-ATTCTAG TAG CTAGAACAGATATACTAC TTGTTTGTTTTTGTG TERM 1363 1348678 - 1348690 + F 90 -7.7 -5.1925 | opp_overlap 1348677 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG TERM 1364 1348800 - 1348784 - f 72 -8 -3.68024 | GGCCCCAACACAGAA GCTGAC GAAAA GTCAGC TTACAATAATGTGCA TERM 1365 1348862 - 1348839 - f 72 -6.8 -4.15222 | opp_overlap 1348845, overlap 1348841 1348845 ATGGGCCCCAACAAA GAGAAATTGG ATTC CCAATTTCTA CAGACAATGCAAGTT TERM 1366 1348860 - 1348841 - f 81 -9.4 -3.6761 | opp_overlap 1348845, overlap 1348839 1348845 GGGCCCCAACAAAGA GAAATTGG ATTC CCAATTTC TACAGACAATGCAAG citB 1349289 - 1351994 + | aconitate hydratase SA1185 1352174 - 1352641 + | hypothetical protein SA1186 1353144 - 1352848 - | hypothetical protein TERM 1367 1353505 - 1353467 - R 81 -5.5 -5.26119 | gap 1 TTTGCAAAAATAAAA TAATCCATCAACTGCAAA AAAA TATGCAAT-GATGGACTA ATGTCAAAAAATTGT SA1187 1354128 - 1353520 - | hypothetical protein parE 1354328 - 1356325 + | DNA topoisomerase IV subunit B parC 1356325 - 1358727 + | DNA topoisomerase IV subunit A alsT 1358977 - 1360437 + | amino acid carrier protein (sodium/alanine symporter) TERM 1368 1360515 - 1360480 - f 87 -8.4 -4.71307 | opp_overlap 1360480 TAAAAATCAAATAAA CCCTGAGGTTTTCA AATTAAAG CGAAAATCTCAGGG TTTTAAATTTGTACT TERM 1369 1360480 - 1360515 + F 100 -9.9 -4.40173 | opp_overlap 1360480 TAAAAATCAAATAAA CCCTGAGGTTTTC AAATTAAAGC GAAAATCTCAGGG TTTTAAATTTGTACT glcT 1360937 - 1361788 + | transcription antiterminator SAS043 1361835 - 1361930 + | hypothetical protein TERM 1370 1362520 - 1362494 - g 80 -10.2 -3.05536 | opp_overlap 1362487 1362495 AAACGATTGCTAATA TTGGCGTTGTGA TTG TCACAACACCAT TTGTACTATTCTTTA TERM 1371 1362495 - 1362519 + G 100 -11.5 -4.11081 | opp_overlap 1362494, overlap 1362487 AACGATTGCTAATAT TGGCGTTGTGA TTG TCACAACACCA TTTGTACTATTCTTT SA1192 1361923 - 1363131 + | hypothetical protein fmtC 1363612 - 1366134 + | oxacillin resistance-related FmtC protein TERM 1372 1366141 - 1366183 + T 85 -5.7 -5.4387 | gap 1 CACAAATAATTAAAA TCCAAGTGCTAAGAGGTATA CAGT TATGCCTGA-AGCGCTTGGA TTTTTTGGTTTCTAT TERM 1373 1366217 - 1366259 + T 82 -7.9 -4.43012 | opp_overlap 1366219, overlap 1366219 GAATGATTTATAAAA AACGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCGTA TTTTAATATTGAAAT TERM 1374 1366257 - 1366219 - T 100 -12.7 -5.28778 | opp_overlap 1366217 1366219 ATGATTTATAAAAAA CGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCG TATTTTAATATTGAA TERM 1375 1366219 - 1366257 + T 89 -10.5 -3.81853 | opp_overlap 1366219, overlap 1366217 ATGATTTATAAAAAA CGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCG TATTTTAATATTGAA msrA 1366846 - 1366337 - | methionine sulfoxide reductase A msrR 1366983 - 1367966 + | peptide methionine sulfoxide reductase regulator MsrR TERM 1376 1368022 - 1367964 - T 100 -15 -2.51547 | opp_overlap 1367970 1367974, overlap 1367974 TTTTTAGATGAAGAT TAAAAATAAACAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTGTTCGTTTTCA AAGAATTAATTGGCA TERM 1377 1367970 - 1368016 + T 100 -14 -4.09739 | opp_overlap 1367964 1367974, overlap 1367974 GATGAAGATTAAAAA TAAACAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTGTTCG TTTTCAAAGAATTAA TERM 1378 1368012 - 1367974 - T 100 -14.8 -4.95618 | opp_overlap 1367970 1367974, overlap 1367964 AAGATTAAAAATAAA CAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTG TTCGTTTTCAAAGAA TERM 1379 1367974 - 1368012 + T 100 -17 -3.66908 | opp_overlap 1367974 1367964, overlap 1367970 AAGATTAAAAATAAA CAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTG TTCGTTTTCAAAGAA SAS044 1368242 - 1368054 - | 4-oxalocrotonate tautomerase TERM 1380 1368080 - 1368098 + g 78 -7.4 -4.25325 | ACTTTCTTACGCCAG CCACACCA TAA TGGTTTGG TTTCATTTCTTCTAT SA1196 1368387 - 1369649 + | hypothetical protein tyrA 1370877 - 1369786 - | prephenate dehydrogenase SA1198 1371042 - 1372073 + | hypothetical protein TERM 1381 1372284 - 1372330 + F 73 -3.9 -5.27335 | gap 1 TATGTTAACTAAGGT GGCACCACGGTAACGCGT CCTTACAGGTAT ATGCGTTAT-GTGGTGTC TTTTTATTTAGACAA TERM 1382 1372506 - 1372542 + F 100 -13.2 -5.00616 | gap 1, overlap 1372503 TTTAGGTGGTACCAC GCGTCAGCGTCCTTTAT ATTG AT-AAGGATGCTGGCGC TTTTTTGAAAGGAGC TERM 1383 1373762 - 1373787 + G 75 -9.9 -2.76171 | gap 1, opp_overlap 1373762 1373761, overlap 1373756 ATATATGAACAATAT CCAC-ATAAACG AGG CGTTTATAGTGG TGGTGTTGGATACAT TERM 1384 1373787 - 1373762 - g 75 -9.9 -2.68109 | gap 1, opp_overlap 1373756 1373762, overlap 1373761 ATATATGAACAATAT CCAC-ATAAACG AGG CGTTTATAGTGG TGGTGTTGGATACAT SA1199 1372565 - 1373971 + | anthranilate synthase component I trpG 1373968 - 1374534 + | anthranilate synthase component II TERM 1385 1374895 - 1374871 - g 70 -4.3 -4.6759 | overlap 1374861 1374860 AACATGGTAATAAAA GTATTACCTCA AAT TCAGGTAGTAC GGATTTGTTAAATCA trpD 1374540 - 1375538 + | anthranilate phosphoribosyltransferase trpC 1375540 - 1376322 + | indole-3-glycerol-phosphate synthase TERM 1386 1376382 - 1376398 + G 70 -7.3 -3.80858 | opp_overlap 1376382 GCGGCCAGTCAATTA CCTATTG ATG CGATAGG TTTCATCCATTATGA trpF 1376322 - 1376954 + | phosphoriborylanthranilate isomerase trpB 1376947 - 1378161 + | tryptophan synthase subunit beta TERM 1387 1378670 - 1378644 - g 72 -8 -3.37464 | overlap 1378646 CGATGAATGCGACAA CAGGACAAAACG GTG CGTTTCATCCAG AATTAAAACGAAAAA TERM 1388 1378668 - 1378646 - g 77 -9.2 -3.25459 | overlap 1378644 ATGAATGCGACAACA GGACAAAACG GTG CGTTTCATCC AGAATTAAAACGAAA trpA 1378154 - 1378882 + | tryptophan synthase subunit alpha TERM 1389 1378970 - 1379001 + F 76 -3.9 -5.48303 | opp_overlap 1378965 1378970 AGAAATGATACAAAA GTAATATGAGC AAACCCAAAC GTTCATATTAC TTTTTTTGAAATTGT femA 1379204 - 1380466 + | factor essential for expression of methicillin resistance TERM 1390 1380709 - 1380720 + G 70 -4.4 -4.70879 | CTATTCGAATCGTGG TCCA GTAA TGGA TTTTTCAGATTTAGG femB 1380485 - 1381744 + | FemB protein TERM 1391 1381760 - 1381788 + F 86 -6.1 -5.47914 | ATGTAAATGATGTTA GGGCTTATAGT TATTGAT ACTATAGGCTC TTTTTTATGCTTTTT SA1208 1382033 - 1382779 + | hypothetical protein TERM 1392 1382794 - 1382783 - f 71 -3 -5.27335 | TGTGTTAAATAAAAA GTTA ATAG TAAC TACAAACATACTTTA SA1209 1383009 - 1383776 + | hypothetical protein TERM 1393 1383826 - 1383774 - T 100 -12.3 -4.20797 | opp_overlap 1383780 1383781 1383782 1383822, overlap 1383779 1383782 TTAAAATCATATAAA TAAAAGCACCCCTATCAAATGATAA TCA TTATCAATCGATAGGGGCTATTTTA ATAAAATTCGTCCTC TERM 1394 1383821 - 1383779 - T 90 -7.8 -5.06016 | opp_overlap 1383780 1383781 1383782, overlap 1383774 1383782 ATCATATAAATAAAA GCACCCCTATCAAATGATAA TCA TTATCAATCGATAGGGGCTA TTTTAATAAAATTCG TERM 1395 1383781 - 1383819 + T 89 -10.4 -3.74158 | opp_overlap 1383779 1383774 1383782, overlap 1383780 1383782 CATATAAATAAAAGC ACCCCTATCAAATGATAA TCA TTATCAATCGATAGGGGC TATTTTAATAAAATT TERM 1396 1383782 - 1383818 + T 100 -13.9 -2.83772 | opp_overlap 1383782 1383779 1383774, overlap 1383781 1383780 ATATAAATAAAAGCA CCCCTATCAAATGATAA TCA TTATCAATCGATAGGGG CTATTTTAATAAAAT TERM 1397 1383818 - 1383782 - T 100 -16.1 -3.36868 | opp_overlap 1383781 1383780 1383782, overlap 1383779 1383774 ATATAAATAAAAGCA CCCCTATCAAATGATAA TCA TTATCAATCGATAGGGG CTATTTTAATAAAAT SA1210 1384297 - 1383824 - | hypothetical protein opp-2F 1385122 - 1384421 - | oligopeptide transporter ATPase subunit opp-2D 1385888 - 1385115 - | oligopeptide transport ATPase TERM 1398 1385512 - 1385534 + g 72 -9.2 -2.75471 | opp_overlap 1385512, overlap 1385506 1385511 1385509 TTAACCCACGACAAA GCCTTGTCAA TTT TTGACAAAGC CTCTTCTTTACTACT TERM 1399 1385534 - 1385512 - G 93 -11.4 -3.99405 | opp_overlap 1385506 1385511 1385509 1385512 TTAACCCACGACAAA GCCTTGTCAA TTT TTGACAAAGC CTCTTCTTTACTACT opp-2C 1386705 - 1385875 - | oligopeptide transporter permease TERM 1400 1386339 - 1386328 - G 76 -4.4 -5.02476 | overlap 1386330 AGATGGTTGAAAAAA GCTT GCTA AAGC AATCATGATGATAAA opp-2B 1387684 - 1386698 - | oligopeptide transporter permease TERM 1401 1387569 - 1387594 + g 85 -9.1 -3.91911 | opp_overlap 1387576 TCAAGATGTAATATT TTATCAACAGG ATTG CCTGGTGATAA TTTCATTAAAATGAA TERM 1402 1387701 - 1387717 + r 74 -5.1 -4.89063 | ATAGTCCCCCTCCTT GTGTAAG TTA CTAACAC TTTCTTTTTACATGA SA1215 1388332 - 1387988 - | hypothetical protein TERM 1403 1388584 - 1388566 - g 72 -8.2 -3.41292 | opp_overlap 1388568, overlap 1388564 ACCTTTAAGAGAAGA TGTTCCTG TTT CAGAAACA TGGGATTTAGTAGAC TERM 1404 1389636 - 1389649 + G 74 -5.3 -4.68209 | CAAGTCCATACTTTA CACAT TCAT ATGTG TTTATTTCTTGGACT TERM 1405 1390218 - 1390202 - g 77 -5.1 -5.18561 | GAAACATTGAAAAAA GGTGGTA GTG TATCACC TGTCGAACTTGCAAA SA1216 1388537 - 1390351 + | hypothetical protein TERM 1406 1390385 - 1390420 + T 100 -12.8 -5.4477 | opp_overlap 1390385 GTAGAACAATATAAA CCAAGATTTTCACATT ACTA ATTGTGAGAATCTTGG TTTTTTTGAGGGTTT TERM 1407 1390420 - 1390385 - T 100 -10.6 -4.37544 | opp_overlap 1390385 GTAGAACAATATAAA CCAAGATTTTCACATT ACTA ATTGTGAGAATCTTGG TTTTTTTGAGGGTTT SA1217 1391132 - 1390491 - | hypothetical protein TERM 1408 1390539 - 1390529 - G 71 -3.2 -5.12987 | TTAAATAAAAATAAA CACT TTC AGCG ATGTTAATAATATGA pstB 1391990 - 1391139 - | phosphate ABC transporter, ATP-binding protein SA1219 1392954 - 1392037 - | hypothetical protein SA1220 1393882 - 1392956 - | hypothetical protein SA1221 1395056 - 1394073 - | thioredoxine reductase TERM 1409 1395302 - 1395357 + H 82 -8.7 -3.91032 | gap 1, opp_overlap 1395309, overlap 1395309 GGGACATAAATCCCT AAAAAAACAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTGTTCTCTA TTTATACAATACTTC TERM 1410 1395350 - 1395309 - H 100 -15.6 -5.4477 | gap 1, opp_overlap 1395309 1395302 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1411 1395309 - 1395350 + H 100 -15.6 -3.80279 | gap 1, opp_overlap 1395309, overlap 1395302 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1412 1395496 - 1395512 + H 72 -8 -3.68024 | GGCACATTGTTGTAA GCTGAC TATAT GTCAGC TTCTGTGTTGGGGCC TERM 1413 1395670 - 1395657 - g 84 -3.9 -5.75822 | CAGAAACGAAAAAAA TCTAT AGTC ATAGA AAAATTTATGTAGAG TERM 1414 1395820 - 1395801 - g 74 -5.8 -4.56314 | gap 1, opp_overlap 1395804, overlap 1395803 1395804 1395806 TTAATATAAGGAAAA TAGCAGCTC AAC GAGCTG-TA CATTATAAAATACAT TERM 1415 1395804 - 1395818 + G 75 -10 -2.60079 | opp_overlap 1395804 1395803 1395801 1395806 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1416 1395818 - 1395804 - g 76 -10 -2.91057 | opp_overlap 1395804, overlap 1395803 1395801 1395806 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1417 1395878 - 1395845 - g 100 -9.1 -5.25893 | opp_overlap 1395845 ATACATATCAAAAAA GCTAATTTCCATCAA ATAA TTAATAGAAATCAGC TTTTTTACATTGCCT truncated-SA 1395599 - 1395895 + | putative transposase TERM 1418 1396021 - 1396002 - T 86 -6.4 -5.48063 | ATTGAATATAAAAAA CACGCATC CTAC GACACGTG TAAAAATGATTATTC SA1223 1396933 - 1396031 - | hypothetical protein SA1224 1397080 - 1398681 + | hypothetical protein TERM 1419 1398915 - 1398942 + F 78 -9.9 -3.16619 | overlap 1398913 1398911 ATATAACATTGCAGG GTCTAGGGCAT TGATTC ATGCCCGAGAC TATATTCAATTTAAT TERM 1420 1398996 - 1399051 + F 82 -8.7 -3.91032 | gap 1, opp_overlap 1399003, overlap 1399003 GGGACATAAATCCCT AAAAAAACAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTGTTCTCTA TTTATACAATACTTC TERM 1421 1399044 - 1399003 - f 100 -15.6 -5.4477 | gap 1, opp_overlap 1398996 1399003 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1422 1399003 - 1399044 + F 100 -15.6 -3.80279 | gap 1, opp_overlap 1399003, overlap 1398996 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1423 1399672 - 1399698 + F 100 -11.7 -5.97979 | opp_overlap 1399672 1399675 1399678 TTGTATATAGATTAA GAGCAAGTTCG CATTC CGAACTTGTTC TTTTTTTATTATTGT TERM 1424 1399698 - 1399672 - f 78 -9.5 -3.35197 | opp_overlap 1399672, overlap 1399675 1399678 TTGTATATAGATTAA GAGCAAGTTCG CATTC CGAACTTGTTC TTTTTTTATTATTGT TERM 1425 1399695 - 1399675 - f 75 -9.8 -2.54059 | opp_overlap 1399672, overlap 1399672 1399678 TATATAGATTAAGAG CAAGTTCG CATTC CGAACTTG TTCTTTTTTTATTAT lysC 1399743 - 1400948 + | aspartate kinase asd 1401012 - 1402001 + | aspartate semialdehyde dehydrogenase dapA 1402003 - 1402890 + | dihydrodipicolinate synthase dapB 1402887 - 1403609 + | dihydrodipicolinate reductase dapD 1403636 - 1404355 + | tetrahydrodipicolinate acetyltransferase TERM 1426 1404381 - 1404406 + F 81 -8.4 -4.18213 | GTATAATAATTTCAA GGTTGAGATA CGATTA TGTCTCAACC TTATTGTTTATCATT SA1230 1404498 - 1405649 + | hippurate hydrolase SA1231 1405654 - 1406739 + | hypothetical protein lysA 1406729 - 1407994 + | diaminopimelate decarboxylase TERM 1427 1408009 - 1408047 + T 77 -5.9 -4.93318 | opp_overlap 1408010, overlap 1408010 AAAATAAACAAAGTA ATCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGAA TTTTTATGCATTATA TERM 1428 1408010 - 1408046 + T 81 -9.4 -3.54906 | opp_overlap 1408010, overlap 1408009 AAATAAACAAAGTAA TCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGA ATTTTTATGCATTAT TERM 1429 1408046 - 1408010 - T 95 -11.6 -3.8293 | opp_overlap 1408009 1408010 AAATAAACAAAGTAA TCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGA ATTTTTATGCATTAT SA1233 1408635 - 1408234 - | hypothetical protein TERM 1430 1408744 - 1408719 - R 83 -3.4 -5.71712 | gap 1, overlap 1408722 GGTGATATAAAAAAA GAG-TTCTCAA TTTGG CTGAGAAACTC ATCGCGTTAAGTATT TERM 1431 1408779 - 1408800 + r 78 -9.5 -3.35992 | opp_overlap 1408779 ATAAGCATATAAAAA CACCTTACT TCTT GGTAAGGTG TTAGTTAAAATCAAT TERM 1432 1408800 - 1408779 - R 100 -8.8 -5.05079 | opp_overlap 1408779 ATAAGCATATAAAAA CACCTTAC TTCTTG GTAAGGTG TTAGTTAAAATCAAT cspA 1409032 - 1408832 - | major cold shock protein CspA SA1235 1409511 - 1409203 - | hypothetical protein SA1236 1409674 - 1409943 + | hypothetical protein SA1237 1409968 - 1410591 + | hypothetical protein SA1238 1410623 - 1411759 + | hypothetical protein TERM 1433 1411779 - 1411822 + T 73 -8.4 -3.52841 | gap 1, opp_overlap 1411784, overlap 1411784 CGAATTAGATATAAC AAAAAGGAAGCATCCTACGAT TAA ATTGGAG-ATGCTTCCTTTTA TATTATTCGTTATTC TERM 1434 1411784 - 1411817 + T 87 -8.3 -4.80656 | gap 1, opp_overlap 1411784, overlap 1411779 TAGATATAACAAAAA GGAAGCATCCTACGAT TAA ATTGGAG-ATGCTTCC TTTTATATTATTCGT TERM 1435 1411817 - 1411784 - T 82 -6.1 -5.27206 | gap 1, opp_overlap 1411779 1411784 TAGATATAACAAAAA GGAAGCATCCTACGAT TAA ATTGGAG-ATGCTTCC TTTTATATTATTCGT braB 1413175 - 1411832 - | branched-chain amino acid carrier protein TERM 1436 1412581 - 1412565 - G 72 -5.1 -4.71382 | opp_overlap 1412575, overlap 1412566 ACAATCATTGAAAAA GCAATTG CTG CAATGGC ATCCATTGTTAAATA TERM 1437 1412575 - 1412589 + g 71 -8.6 -3.08471 | opp_overlap 1412565 1412566 AAAAAGCAATTGCTG CAATGG CAT CCATTG TTAAATAGCCTTGTG SA1240 1415287 - 1413401 - | hypothetical protein TERM 1438 1413653 - 1413632 - G 82 -8.7 -4.02108 | TTGACTATAATTAAA TGCAGACGG TTCG CCGTCTGAA AATACGATTAAAAAT SA1241 1416092 - 1415301 - | hypothetical protein SA1242 1416476 - 1416273 - | hypothetical protein SA1243 1417314 - 1416505 - | hypothetical protein TERM 1439 1417841 - 1417795 - R 70 -4 -4.98911 | gap 1, opp_overlap 1417798, overlap 1417796 1417798 CATTATAAAAATAAA GTACAGCAGTAAGAT-ATTTC GACTAG AAAATAATCTTACTGCTGTTT GTTATTGATTTGATT TERM 1440 1417838 - 1417798 - R 80 -10.1 -3.34078 | gap 1, opp_overlap 1417798, overlap 1417796 1417795 TATAAAAATAAAGTA CAGCAGTAAGAT-ATTTC GACTAG AAAATAATCTTACTGCTG TTTGTTATTGATTTG TERM 1441 1417798 - 1417838 + r 100 -9.4 -4.54404 | gap 1, opp_overlap 1417798 1417796 1417795 TATAAAAATAAAGTA CAGCAGTAAGA-TATTT CGACTAGA AAATAATCTTACTGCTG TTTGTTATTGATTTG odhB 1419162 - 1417894 - | dihydrolipoamide acetyltransferase TERM 1442 1417926 - 1417943 + g 71 -5.7 -4.59773 | AGTCTTCTGGGTTTT CAATTAA TTCT TTAATTG TTTTTAAGAATCCAA TERM 1443 1418525 - 1418544 + g 84 -6.6 -5.02476 | GTTAACATAGCTGTA TTATTAGA TACC TCTAATAA TTTTTTGGCAGCTGT kgd 1421908 - 1419176 - | alpha-ketoglutarate decarboxylase TERM 1444 1421022 - 1421036 + g 77 -8.6 -3.62597 | opp_overlap 1421021 ACAGGTGCAACAATT TCCAAG TGA CTTGGA TTGTTAGCCAGTGCA TERM 1445 1421116 - 1421098 - G 70 -8.2 -3.18681 | TTTTAATGCCACCAA GGTGATAT TTC ACATCACC AGTCCATCCAGCAGT TERM 1446 1421864 - 1421890 + g 77 -5.3 -5.00851 | gap 1, opp_overlap 1421856, overlap 1421856 ACCTAAATTCGCACC GAAGTTTACAGG AGCC TCTG-AAACTTC TTTTCTTTCGTTAGT TERM 1447 1422033 - 1422006 - R 100 -12.2 -4.58395 | opp_overlap 1422006 1422009 1422012 TTTATCTGCTAAAAA GAAGAATCAACA AAAG CGTTGATTCTTC TAGGTTTATAGATGT TERM 1448 1422006 - 1422033 + r 85 -11.5 -2.71593 | opp_overlap 1422006, overlap 1422009 1422012 TTTATCTGCTAAAAA GAAGAATCAAC AAAAGC GTTGATTCTTC TAGGTTTATAGATGT arlS 1423547 - 1422192 - | putative protein histidine kinase ArlS SA1247 1423789 - 1423544 - | truncated (putative response regulator ArlR SA1248 1424187 - 1423786 - | truncated (putative response regulator ArlR [S SA1249 1424858 - 1424658 - | hypothetical protein TERM 1449 1424919 - 1424962 + r 100 -8.4 -5.66989 | gap 1, opp_overlap 1424924 TATAACAACGTTTTA TAAAAGCAGTAAACCCTTACG ACA CTTTA-GGTTTACTGCTTTTG TTTTTTTACTATTTA TERM 1450 1424957 - 1424924 - R 74 -6.1 -4.386 | gap 1, opp_overlap 1424919 CAACGTTTTATAAAA GCAGTAAACCCTTACG ACA CTTTA-GGTTTACTGC TTTTGTTTTTTTACT SA1250 1425589 - 1424975 - | hypothetical protein murG 1426676 - 1425606 - | N-acetylglucosaminyl transferase SA1252 1427197 - 1426688 - | hypothetical protein TERM 1451 1427347 - 1427337 - R 70 -4 -4.85618 | AAATAACCAATAAAA GTAT CAT ATAC CAATTAATCGATTGT TERM 1452 1427557 - 1427509 - R 100 -9.2 -5.09204 | opp_overlap 1427513 1427515, overlap 1427513 AGACGTCAATAAAAA TAAACACGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCGTGTC-A TTAACATAATAATAA TERM 1453 1427513 - 1427554 + r 100 -12.5 -2.74012 | gap 1, opp_overlap 1427513 1427509, overlap 1427515 GTCAATAAAAATAAA CACGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCGTG TCATTAACATAATAA TERM 1454 1427554 - 1427513 - R 100 -14.7 -5.05606 | gap 1, opp_overlap 1427513 1427515, overlap 1427509 GTCAATAAAAATAAA CACGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCGTG TCATTAACATAATAA TERM 1455 1427515 - 1427552 + r 75 -9.3 -2.91452 | gap 1, opp_overlap 1427513 1427509, overlap 1427513 CAATAAAAATAAACA CGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAAGCG TGTCATTAACATAAT ctpA 1429087 - 1427597 - | carboxy-terminal processing proteinase ctpA TERM 1456 1429257 - 1429219 - R 85 -10.5 -3.60627 | overlap 1429225 TTAGTTTATTTTAAA TTAAAACCAGGATAACG AATTG CATCACCCTGGTTCTAA CTATTATTTTTAAAA TERM 1457 1429251 - 1429225 - R 81 -7.3 -4.55798 | overlap 1429219 TATTTTAAATTAAAA CCAGGATAACG AATTG CATCACCCTGG TTCTAACTATTATTT SA1254 1429500 - 1429279 - | hypothetical protein SA1255 1430000 - 1429500 - | PTS system, glucose-specific enzyme II, A component SA1256 1430440 - 1430012 - | methionine sulfoxide reductase B SA1257 1430966 - 1430433 - | methionine sulfoxide reductase A SA1258 1431891 - 1431052 - | hypothetical protein dfrA 1432385 - 1431906 - | dihydrofolate reductase thyA 1433541 - 1432585 - | thymidylate synthase SA1261 1434402 - 1433965 - | hypothetical protein SA1262 1435542 - 1434418 - | hypothetical protein TERM 1458 1434683 - 1434705 + g 72 -9.2 -2.52946 | overlap 1434682 1434689 TCGCTTATGCAATCC CCTGCTGT TCTTCTT ACAGCAGG ACTTTTATCACGAAG SA1263 1435831 - 1435580 - | hypothetical protein SA1264 1436028 - 1435843 - | hypothetical protein SA1265 1436282 - 1436986 + | hypothetical protein TERM 1459 1437148 - 1437164 + F 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 1460 1437212 - 1437200 - f 90 -7.7 -5.1925 | opp_overlap 1437199 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT TERM 1461 1437359 - 1437386 + F 90 -7.8 -5.18357 | AGCGAGTATTTTAAA CACGTGTTACTT ATTT AAGTGATGCGTG TTTTTTAATGGATTA SA1266 1437468 - 1437869 + | hypothetical protein TERM 1462 1437868 - 1437910 + T 89 -10.6 -3.85698 | opp_overlap 1437872, overlap 1437870 1437872 TTAAAAAGAATAAAT AAAAGGAGCACCGACTGATG TGA TGTCAATCGGTGCTCCTCTA TTTATCAAAGAAACA TERM 1463 1437870 - 1437908 + T 100 -13.2 -3.51934 | opp_overlap 1437872, overlap 1437868 1437872 AAAAAGAATAAATAA AAGGAGCACCGACTGATG TGA TGTCAATCGGTGCTCCTC TATTTATCAAAGAAA TERM 1464 1437872 - 1437906 + T 100 -15.8 -3.3353 | opp_overlap 1437872, overlap 1437870 1437868 AAAGAATAAATAAAA GGAGCACCGACTGATG TGA TGTCAATCGGTGCTCC TCTATTTATCAAAGA TERM 1465 1437906 - 1437872 - T 100 -16.6 -5.20331 | opp_overlap 1437870 1437868 1437872 AAAGAATAAATAAAA GGAGCACCGACTGA TGTGATG TCAATCGGTGCTCC TCTATTTATCAAAGA ebhA 1458069 - 1437928 - | hypothetical protein TERM 1466 1442855 - 1442871 + g 72 -5.1 -4.72486 | overlap 1442857 TTTGCATTTTGAACT GCTGCTT GGT AAGCATC TTTTTGCGGTTTATC TERM 1467 1443233 - 1443249 + g 72 -5.1 -4.72486 | overlap 1443235 TTTGCATTTTGAACT GCTGCTT GGT AAGCATC TTTTTGCGGTTTATC TERM 1468 1445111 - 1445121 + g 74 -6.8 -4.37157 | ATGATATTATTAGCA GCTG TTA CAGC TTTGTTATAGTCATT TERM 1469 1447337 - 1447348 + g 70 -4.4 -4.73617 | TGAATTGTATTTGGA TCCA TTGT TGGA TTTGTTGTTTGTTTT TERM 1470 1452466 - 1452486 + g 70 -3.9 -4.92314 | ATGCGTTGCACCTTC GATTTGGCG TTT CGCTGCATC TTTTTGTGCATTAGT TERM 1471 1452667 - 1452679 + g 73 -7.7 -3.87538 | overlap 1452669 1452672 AATGATTGCTTTTGC TGCAG TGA CTGCA TTGTTGTAGTCATTT TERM 1472 1452672 - 1452691 + g 89 -7.2 -5.26247 | overlap 1452667 1452669 TTGCTTTTGCTGCAG TGACTGCA TTGT TGTAGTCA TTTTGTTTGTTTTGA TERM 1473 1452901 - 1452913 + g 73 -4.1 -4.9138 | opp_overlap 1452901 AGTTAAACCATCAAT TGCTG TGT TAGCA TTTTGTTTCGCTACT TERM 1474 1454053 - 1454068 + g 78 -7.6 -4.0896 | GTTTTTCGCTGTTGT CTTAGC TTGA GCTAAG TTTTGCGCACCATTT TERM 1475 1455111 - 1455130 + g 89 -9.4 -4.12226 | overlap 1455109 1455114 CATTTTGCGCTTGTT CAACTTGA TGCT TCAAGTTG TCTTTTTGTAATTGT ebhB 1469802 - 1458130 - | hypothetical protein TERM 1476 1459092 - 1459118 + g 70 -4.4 -4.72497 | TTAAAATATCTTTCG CAGCTTGCAC CGCATTT GTGTATGCTG TTTTCTTACTAGGTG TERM 1477 1460078 - 1460089 + g 72 -5.8 -4.39107 | TTTAAATCACTTGCA TGCG TAAT CGCA TTTGTTGCTTCTGTT TERM 1478 1461789 - 1461801 + g 70 -4.1 -4.80882 | ATGCTGTTAATGCGT TATCG ACA CGATG TTTTTCATCTGAAAT TERM 1479 1462037 - 1462053 + g 73 -7.3 -3.96298 | overlap 1462037 GCTTGATCAATCTTA GTTTGTG CTG CACGAAC TTTAGTTAGTGCGTC TERM 1480 1463145 - 1463165 + g 71 -7.5 -3.55524 | overlap 1463120 CAATTGTAATCGCTC CTGCCGCTG TTT CAGTGACAG TTGGTTTCGCTGGTT TERM 1481 1463962 - 1463977 + g 74 -6.2 -4.5032 | AGAAGCACTATCATT TGAATC AACA GATTCA TTTCTTGTTACTGTA TERM 1482 1467719 - 1467708 - G 77 -5.8 -4.6645 | opp_overlap 1467708 1467707 CATATACATAGAAAA CTGG ATGC CCAG CTTGTTTTGAAAATG TERM 1483 1470141 - 1470099 - R 90 -6.6 -5.54885 | gap 1 AAGAGTAATAAAAAA CCAATCCCTATGT-TCATT TAAAAT AATGACACATAAGAATCGG TTTATATTTTTGTTT TERM 1484 1470192 - 1470210 + r 74 -9 -3.21914 | overlap 1470190 GATTTCAATTTAATT CTCAATTA TCA TAATTGAG TGTCGTTTTGTTTAG SA1269 1471591 - 1470200 - | major facilitator transporter TERM 1485 1471432 - 1471416 - G 72 -5.1 -4.65263 | ATTCCTGAAAATAAA GCAGTTA TAC TAACGGC GATATTAACCGTTCC TERM 1486 1471650 - 1471621 - R 95 -10.2 -4.10657 | opp_overlap 1471621 1471623 CTATACTTTTGAAAA CAGACAAATTCC ATAACA GAAATTTGTCTG TTCGATAGAATAATT SA1270 1473069 - 1471747 - | hypothetical protein TERM 1487 1471913 - 1471927 + g 73 -7.2 -3.95042 | TATAACGGTACTTTA TATGGA CGC TCCATA TTTGGTTCACGTTTT TERM 1488 1472861 - 1472880 + g 74 -9.3 -3.01712 | overlap 1472859 CCTGTTTCAGGGATT GCAGCAG CAAGTT CTGCTGC TGTTAACCCCGCACA SA1271 1474140 - 1473100 - | threonine dehydratase SA1272 1475353 - 1474235 - | alanine dehydrogenase TERM 1489 1475374 - 1475391 + r 79 -7.1 -4.40732 | overlap 1475369 1475381 ACACTCCTCTTTCAT TTGTGAA TAAT TTCACAA TTATTTTATCCTTTG TERM 1490 1475750 - 1475782 + r 88 -7.9 -5.00765 | opp_overlap 1475750 CCAAATACGCAAAAA GACTATTTCTACC TTGCATC GATAGAAATAGTC TTTTTATACTTAATT TERM 1491 1475782 - 1475750 - R 100 -10.1 -4.77986 | opp_overlap 1475750 CCAAATACGCAAAAA GACTATTTCTACC TTGCATC GATAGAAATAGTC TTTTTATACTTAATT SA1273 1476707 - 1475829 - | hypothetical protein SA1274 1480167 - 1476727 - | hypothetical protein TERM 1492 1476826 - 1476794 - G 71 -7.9 -3.64822 | opp_overlap 1476793 1476799 1476805 AGTGTTGTATCTAAA TCAAATGCTAATAAA TCG TTTATTTGCGTTTGA ATATTAGCTTCAAAA SA1275 1480471 - 1481811 + | hypothetical protein SA1276 1482349 - 1482017 - | hypothetical protein SA1277 1483578 - 1482433 - | hypothetical protein TERM 1493 1483769 - 1483748 - R 86 -7.3 -5.14563 | CTTTTCATGAAAAAA GCTCTCC ATCATCTA GGAGAGC TAAACTAGTAGTGAT SA1278 1484128 - 1484012 - | hypothetical protein SA1279 1484573 - 1484229 - | hypothetical protein SA1280 1485150 - 1484587 - | hypothetical protein SA1281 1485493 - 1485143 - | hypothetical protein recU 1486033 - 1486659 + | Holliday junction-specific endonuclease TERM 1494 1487691 - 1487680 - g 71 -3 -5.04987 | opp_overlap 1487680, overlap 1487669 AAGATGTTCAAAAAA CATT ACAA AATG ATGTTGATAATGGTA pbp2 1486656 - 1488839 + | PBP2 TERM 1495 1488896 - 1488851 - T 93 -12.1 -3.1085 | opp_overlap 1488856, overlap 1488856 CTAATCCACTCAACA TAAAATCCTCAGTTATACCAT ATTT ATGGTGTAGCTGAGGATTTTT TTAGGTTCTTCATCT TERM 1496 1488856 - 1488891 + T 100 -16.4 -5.57054 | opp_overlap 1488851 1488856 CCACTCAACATAAAA TCCTCAGTTATACCAT ATTT ATGGTGTAGCTGAGGA TTTTTTTAGGTTCTT TERM 1497 1488891 - 1488856 - T 100 -12 -4.68724 | opp_overlap 1488856, overlap 1488851 CCACTCAACATAAAA TCCTCAGTTATACCAT ATTT ATGGTGTAGCTGAGGA TTTTTTTAGGTTCTT TERM 1498 1488918 - 1488939 + T 82 -4.4 -5.65177 | overlap 1488921 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTATAAGTAT SA1284 1489746 - 1489405 - | hypothetical protein nth 1490410 - 1489751 - | endonuclease-like protein SA1286 1491086 - 1490400 - | hypothetical protein TERM 1499 1491336 - 1491370 + r 79 -5.1 -5.22006 | gap 1, opp_overlap 1491339, overlap 1491339 TCATTTTGCAAGCAT AAATCGCCCAG-CTAT TAAT ATAGGCTGGACGATTC TTTTTATTATCATAA TERM 1500 1491367 - 1491339 - R 83 -9 -4.05446 | gap 1, opp_overlap 1491339 1491336 TTTTGCAAGCATAAA TCGCCCAG-CTAT TAAT ATAGGCTGGACGA TTCTTTTTATTATCA TERM 1501 1491339 - 1491367 + r 78 -6.8 -4.68512 | gap 1, opp_overlap 1491339, overlap 1491336 TTTTGCAAGCATAAA TCGCCCAG-CTAT TAAT ATAGGCTGGACGA TTCTTTTTATTATCA asnC 1492706 - 1491414 - | asparaginyl-tRNA synthetase TERM 1502 1492975 - 1493013 + r 71 -4.7 -4.68919 | opp_overlap 1492975, overlap 1492965 ACGACCAAACAAAAA TTCTTGTAACAGAACAT AGCAC ATGTCATGTCACAAGAA TTTTACTTTGTATTT TERM 1503 1493013 - 1492975 - R 100 -9.8 -5.34309 | opp_overlap 1492965 1492975 ACGACCAAACAAAAA TTCTTGTAACAGAACATA GCA CATGTCATGTCACAAGAA TTTTACTTTGTATTT dinG 1495721 - 1493028 - | ATP-dependent DNA helicase dinG TERM 1504 1494320 - 1494302 - G 86 -10.4 -3.62539 | overlap 1494298 TACCAATCAAACCAA GCTGATAT TTA ATATCAGC ATAACTCAACTCATT SA1289 1496716 - 1495745 - | hypothetical protein SA1290 1497905 - 1496703 - | tRNA CCA-pyrophosphorylase TERM 1505 1497932 - 1497944 + r 71 -3.4 -5.19212 | CCTTTACTTTTGTTA TGCT CATTT AGCA TTTTTTGATAATAAT SA1291 1499052 - 1497910 - | hypothetical protein SA1292 1499613 - 1499296 - | hypothetical protein TERM 1506 1499907 - 1499878 - R 100 -9.5 -5.73339 | gap 1, opp_overlap 1499878 ATAAGCACAAAAAAA CTAGC-AATCACAC AAA ATGTGATTAGCTAG TTAATAAGTGTCTAA TERM 1507 1499878 - 1499907 + r 73 -8.8 -3.21354 | gap 1, opp_overlap 1499878 ATAAGCACAAAAAAA CTAGC-AATCACA CAAAA TGTGATTAGCTAG TTAATAAGTGTCTAA SA1293 1500647 - 1499949 - | hypothetical protein SA1294 1501288 - 1500701 - | hypothetical protein SA1295 1501853 - 1501278 - | hypothetical protein TERM 1508 1501678 - 1501649 - G 77 -9.3 -3.30701 | opp_overlap 1501649, overlap 1501644 GCTTAGTAAATTGAA TTGCAGAAGCGTG ACTT CCCACCTCTGCAA TTTCTAATGTTTCAT SA1296 1503111 - 1501867 - | hypothetical protein aroA 1504416 - 1503118 - | 3-phosphoshikimate 1-carboxyvinyltransferase aroB 1505490 - 1504426 - | 3-dehydroquinate synthase aroC 1506682 - 1505516 - | chorismate synthase TERM 1509 1506403 - 1506423 + g 88 -6.9 -4.85599 | CACGTTCTTCTTCAC TTATTGGAG CTG CTCCCATAA TTTTTCTCCAATGCG SA1300 1507268 - 1507068 - | hypothetical protein SAS045 1507422 - 1507297 - | hypothetical protein TERM 1510 1507433 - 1507385 - G 74 -2 -5.5208 | gap 2, overlap 1507386 CTACAACATAAAAAA CGGGCCTTGTTATGT-A-TAATCA TAA TGACTAACCACATAACAAAACCCT TTCTACCTTTATAAA TERM 1511 1507513 - 1507489 - R 79 -9.3 -3.52102 | ATTTTATTCATATAA CCATGCATCAC GTG GTGAAGCATAG CTAGTAATTTCATTT ndk 1507926 - 1507477 - | nucleoside diphosphate kinase TERM 1512 1507793 - 1507813 + g 75 -9.7 -2.70525 | opp_overlap 1507797, overlap 1507792 1507789 CCATAATGTGTTTCA GCAAGTTCC ATT GGTACTTGC ATTAATTTACCACCG gerCC 1508977 - 1508018 - | heptaprenyl diphosphate syntase component II ubiE 1509704 - 1508979 - | ubiquinone/menaquinone biosynthesis methyltransferase SA1304 1510279 - 1509707 - | hypothetical protein TERM 1513 1510702 - 1510676 - R 100 -12.5 -4.70319 | opp_overlap 1510682, overlap 1510682 GTATTAAAAGCAAAA TAAAAAGCCCT TATTC AGGGCTTTTTA AGTAAAATTATTTTA TERM 1514 1510682 - 1510696 + r 81 -7.1 -4.67011 | opp_overlap 1510682 1510676 AAAGCAAAATAAAAA GCCCT TATTC AGGGC TTTTTAAGTAAAATT TERM 1515 1510696 - 1510682 - R 90 -7.1 -5.56372 | opp_overlap 1510682, overlap 1510676 AAAGCAAAATAAAAA GCCCT TATTC AGGGC TTTTTAAGTAAAATT hu 1510982 - 1510710 - | DNA-binding protein II TERM 1516 1510912 - 1510922 + g 80 -6.8 -4.72473 | opp_overlap 1510901 AATACAGCATCTACT GCTG AAC CAGC TTCTTTTTTAGTTAA TERM 1517 1511135 - 1511150 + r 78 -6.2 -4.70613 | ATTATTAGCCGTATA TGTGTA ATAA TACACA TTTTATTCAGATTTT gpsA 1512151 - 1511153 - | glycerol-3-phosphate dehydrogenase TERM 1518 1511996 - 1512008 + g 83 -4.9 -5.42975 | AACATCTAATTTCGC GTATT TTA AATAC TTTTTATTTGTATGA engA 1513478 - 1512168 - | GTP-binding protein EngA TERM 1519 1513456 - 1513424 - G 72 -4.9 -4.7373 | opp_overlap 1513454 CTATTCTATTAAAAA TTGTAGATTTACCTA CAT TAGGCCTACCTACAA TAGCTACTATAGGTT TERM 1520 1513682 - 1513651 - R 74 -5.2 -4.96848 | opp_overlap 1513653, overlap 1513653 TTTGTTACATAAAAA TACTCCACATGC AATCATAA ACATGTGGAGTT GACTATTAAATATTA TERM 1521 1513680 - 1513653 - R 77 -7.8 -4.11141 | opp_overlap 1513653, overlap 1513651 TGTTACATAAAAATA CTCCACATGC AATCATAA ACATGTGGAG TTGACTATTAAATAT rpsA 1514875 - 1513700 - | 30S ribosomal protein S1 TERM 1522 1515064 - 1515077 + r 76 -3.9 -5.36441 | AGTAATAAAGTCCGC TATGT TTAT ACATA TTTTTTGTATAAAAA SAS046 1515481 - 1515404 - | hypothetical protein TERM 1523 1515502 - 1515457 - G 83 -7.9 -4.73388 | overlap 1515463 AACTTTTACCAAAAA TAAAAAGGCAACTTTCATTCA TCAT TGAATAAAAATCACCTTTTAA TTTGAGTAAATCATT TERM 1524 1515496 - 1515463 - G 93 -6.9 -5.65496 | overlap 1515457 TACCAAAAATAAAAA GGCAACTTTCATTCA TCAT TGAATAAAAATCACC TTTTAATTTGAGTAA cmk 1516246 - 1515587 - | cytidylate kinase ansA 1516323 - 1517291 + | L-asparaginase SA1311 1518392 - 1517406 - | hypothetical protein TERM 1525 1518306 - 1518317 + g 82 -4.4 -5.55001 | opp_overlap 1518306 CTTTTCAATAATTAA GGTA TCAA TACC TTTTCTTTTTTGTTC ebpS 1520254 - 1518794 - | elastin binding protein SA1313 1521786 - 1520407 - | ATP-dependent DNA helicase RecQ SA1314 1522729 - 1521776 - | hypothetical protein TERM 1526 1522079 - 1522101 + g 72 -5 -4.7373 | opp_overlap 1522082, overlap 1522097 AATATAAGTTTGATT TAATAATGTA GGT TTCATTATTA TTTTTGATAAAATAG TERM 1527 1522323 - 1522337 + g 70 -3.6 -4.97158 | overlap 1522324 AGTTCATTTTCAAAG TCAATT TGT AATTGG TTTTCTTTAATGTAG fer 1522837 - 1523085 + | ferredoxin TERM 1528 1523151 - 1523118 - T 72 -4.7 -4.96848 | gap 1 TGTTCTATAGAAAAA GCAGGCAAGCTATC GTTTATT GATAG-TCACCTGC TTTTTATTATTATGT SA1316 1523736 - 1523191 - | hypothetical protein SA1317 1525094 - 1524138 - | hypothetical protein TERM 1529 1524368 - 1524358 - G 71 -5.4 -4.51743 | TTAGTACTAAATAAA GTTG TAA CAAC ATATGGACGTGATTT SA1318 1526461 - 1525565 - | hypothetical protein TERM 1530 1525717 - 1525727 + g 73 -4 -5.1356 | CATCTACTGTATTGT CTTT AGT AAAG TTTTTCTTAGTAGAA TERM 1531 1525845 - 1525859 + g 70 -7.2 -3.73132 | overlap 1525830 1525828 1525844 TTATGAATCAATGGT TCGTAA TAT TTACGA TATTCTTTTAAATTT SA1319 1527424 - 1526519 - | hypothetical protein TERM 1532 1527498 - 1527472 - R 100 -9.6 -5.44119 | TTTATGTTAAAAAAA CTACTTATTCTC AAA GAAAACAAGTAG CATTTAATAAATTAC SA1320 1529676 - 1527514 - | hypothetical protein SA1321 1530535 - 1529669 - | hypothetical protein TERM 1533 1529967 - 1529981 + g 70 -7.2 -3.73132 | overlap 1529952 1529950 1529966 TTATGAATCAACGGT TCGTAA TAT TTACGA TATTCTTTTAAGTTT TERM 1534 1530815 - 1530777 - R 100 -13.4 -5.31059 | opp_overlap 1530777 ACATCAATCAAAAAA CGCATGCTATAAATTAGA GTC TCTAATCAATAACATGCG TTCTTAAATAACTAT TERM 1535 1530777 - 1530815 + r 77 -9 -3.68836 | opp_overlap 1530777 ACATCAATCAAAAAA CGCATGCTATAAATTAGA GTC TCTAATCAATAACATGCG TTCTTAAATAACTAT srrB 1532605 - 1530839 - | staphylococcal respiratory response protein SrrB TERM 1536 1532557 - 1532524 - GR 75 -5.5 -4.78029 | gap 1, opp_overlap 1532524, overlap 1532519 TTAATAAAATTAAAA CTGTCGTC-ACTATTA AAA TAATAGTTAACCACAG TTTAATTACGACACT srrA 1533296 - 1532571 - | staphylococcal respiratory response protein SrrA rluB 1534166 - 1533429 - | ribosomal large subunit pseudouridine synthase B SA1325 1534701 - 1534159 - | hypothetical protein SA1326 1535449 - 1534694 - | hypothetical protein SA1327 1535517 - 1536023 + | hypothetical protein TERM 1537 1536081 - 1536041 - T 79 -5 -5.1848 | opp_overlap 1536041 1536043 AACCAATTTAAAAAA GCCACAATAGCACA-GAC ATTTTTA GTCATGTG-TATTGTGAC TTTTAAGTTATGGTT xerD 1536988 - 1536101 - | site-specific recombinase TERM 1538 1536270 - 1536281 + g 70 -3.6 -4.93696 | TGGCGTAACGTATGT GGCG TTAA CGTC TTTTTAATGTTTGCC TERM 1539 1537030 - 1537008 - R 100 -10.6 -5.42862 | opp_overlap 1537007 1537006 ACACCTCTAAAAAAA GCGAAGGTTA ATT TAACCTACGC AATTTACTATCCTTT SA1329 1537486 - 1537037 - | hypothetical protein SA1330 1538133 - 1537591 - | hypothetical protein SA1331 1538215 - 1539123 + | hypothetical protein TERM 1540 1539146 - 1539190 + T 75 -7.4 -4.06491 | gap 1, overlap 1539149 TTTCAGTAATAAAAA CAGCAGCA-TGAGGCGTTT CATTATAA AAATGCCTTACTGCTGTTG TTTATGTACAATTCG SA1332 1539587 - 1539339 - | hypothetical protein SA1333 1540358 - 1539603 - | hypothetical protein SA1334 1540500 - 1541315 + | hypothetical protein TERM 1541 1541370 - 1541319 - T 73 -3.9 -5.19251 | opp_overlap 1541320 1541323, overlap 1541323 GAAGACCAATAAAAA CAAACCCG-CCAACACATGTATGCA TCAT CACATACATA-GTTGGACGGGTTAT TTTTATAAATTATTA TERM 1542 1541366 - 1541323 - T 100 -9.1 -5.06961 | opp_overlap 1541323 1541320, overlap 1541319 ACCAATAAAAACAAA CCCG-CCAACACATGTATGCA TCAT CACATACATA-GTTGGACGGG TTATTTTTATAAATT TERM 1543 1541323 - 1541366 + T 73 -5.5 -4.55383 | opp_overlap 1541319 1541323, overlap 1541320 ACCAATAAAAACAAA CCCG-CCAACACATGTATG CATCATCA CATACATA-GTTGGACGGG TTATTTTTATAAATT SA1335 1542338 - 1541418 - | hypothetical protein TERM 1544 1543518 - 1543508 - g 74 -5.4 -4.66953 | TGAAGATGTTAAAAA GAAC TTT GTTC GTGGTCAATATGGCG SA1336 1542651 - 1544135 + | glucose-6-phosphate 1-dehydrogenase SA1337 1544365 - 1545231 + | hypothetical protein TERM 1545 1545301 - 1545249 - T 83 -8 -4.53857 | opp_overlap 1545248 1545246 1545249 ATTAAAAACAAAGAA GCCCCCTAATA-TATCTATAGGTC TACAAAT GGCCT-TAGATTCTATTAGGGGGC ATATTAATATGTTAA TERM 1546 1545249 - 1545301 + T 78 -10.2 -2.54803 | opp_overlap 1545249, overlap 1545248 1545246 ATTAAAAACAAAGAA GCCCCCTAATA-TATCTATAGGTC TACAAAT GGCCT-TAGATTCTATTAGGGGGC ATATTAATATGTTAA malA 1546962 - 1545313 - | alpha-D-1,4-glucosidase TERM 1547 1545961 - 1545981 + g 70 -8.2 -3.27544 | CTTGTCATCGTCACC CCACGTCG ATACA CGTCGTGG TTGGTCGTGATTTTC malR 1547997 - 1546978 - | maltose operon transcriptional repressor TERM 1548 1548164 - 1548126 - R 82 -5.4 -5.3658 | ACGATAAAAATAAAA CCTTCATACTGAAATTCA ATC CGAAAATCAATATAAAGG TTTGTATAAATATTA SA1340 1548562 - 1548191 - | hypothetical protein SA1341 1550246 - 1549029 - | hypothetical protein TERM 1549 1550515 - 1550478 - R 100 -13.8 -4.08872 | opp_overlap 1550478 AAATACATAAGGAAA GAGACAATTTCTATCA AATAAA TAATAGAAATTGTCTC TTTAACATTACCTAA TERM 1550 1550478 - 1550515 + r 93 -11.6 -3.6715 | opp_overlap 1550478 AAATACATAAGGAAA GAGACAATTTCTATCA AATAAA TAATAGAAATTGTCTC TTTAACATTACCTAA gnd 1551968 - 1550562 - | 6-phosphogluconate dehydrogenase TERM 1551 1551793 - 1551822 + g 73 -4.3 -4.88222 | opp_overlap 1551784 1551795, overlap 1551795 TCTAAAGAATTAACA AATTCTTCCAATG AATA CGTTGGATGAATA TTTTTCCCTTTTGAT TERM 1552 1551795 - 1551820 + g 73 -6.9 -4.04549 | opp_overlap 1551784 1551795, overlap 1551793 TAAAGAATTAACAAA TTCTTCCAATG AATA CGTTGGATGAA TATTTTTCCCTTTTG SA1343 1553169 - 1552036 - | hypothetical protein SA1344 1554718 - 1553738 - | hypothetical protein TERM 1553 1554562 - 1554550 - G 76 -7.7 -3.94 | opp_overlap 1554549 1554547 CTAATCTTGAAATAA TCGCT TGT AGCGA ATGTACTTTTGTATG SA1345 1555169 - 1554732 - | hypothetical protein TERM 1554 1555392 - 1555404 + r 70 -6.3 -4.18443 | opp_overlap 1555391 ACTGCAAAAATGCAT TCAAC CAT GTTGA TTATTGTTCTTTATC bmfBB 1556794 - 1555520 - | branched-chain alpha-keto acid dehydrogenase E2 bfmBAB 1557790 - 1556807 - | branched-chain alpha-keto acid dehydrogenase E1 bfmBAA 1558782 - 1557790 - | branched-chain alpha-keto acid dehydrogenase E1 TERM 1555 1558341 - 1558352 + g 73 -4.4 -4.90079 | overlap 1558334 TACCTTCACCAACAG TTGC TGTT GCAA TTTTCTTCTTACCAT TERM 1556 1558535 - 1558525 - G 77 -5.4 -4.86033 | AAACGCTGATAAAAA CGTA TCA TACG CTGAGATACCCATAT SA1349 1560219 - 1558798 - | dihydrolipoamide dehydrogenase recN 1562049 - 1560370 - | DNA repair protein TERM 1557 1561358 - 1561374 + g 74 -5.2 -4.66264 | GTCATATGTGCGTTA TTAAGC GCTAA GCTTAA TTTTTCAGAGTTTTG ahrC 1562517 - 1562065 - | arginine repressor TERM 1558 1562208 - 1562222 + g 80 -7.2 -4.57073 | CTCCAATAGATTGTG CATTAC CAG GTAATG TTTTTAGAACAAGTA ispA 1563830 - 1562949 - | hypothetical protein SA1353 1564038 - 1563808 - | hypothetical protein xseA 1565368 - 1564031 - | exodeoxyribonuclease VII large subunit TERM 1559 1564191 - 1564205 + g 77 -5.8 -4.68612 | ATTGTATTAGTTGGA CTTAAA TTG TTTAAG TTTTCTACTTTATTT nusB 1565774 - 1565385 - | transcription antitermination protein NusB SA1356 1566196 - 1565834 - | hypothetical protein accC 1567566 - 1566211 - | acetyl-CoA carboxylase biotin carboxylase subunit accB 1568030 - 1567566 - | acetyl-CoA carboxylase biotin carboxyl carrier subunit TERM 1560 1567767 - 1567785 + g 75 -8.2 -3.72078 | opp_overlap 1567767, overlap 1567763 TGGCGATTTGTAAAA TGTACCTA CCA TAGGTGCA TTAATTGTTTTGTGA SA1359 1569061 - 1568504 - | elongation factor P SA1360 1570148 - 1569087 - | Xaa-Pro dipeptidase SA1361 1570253 - 1570834 + | hypothetical protein SA1362 1570848 - 1571066 + | hypothetical protein SA1363 1571960 - 1571130 - | hypothetical protein SA1364 1572118 - 1572504 + | hypothetical protein SA1365 1574341 - 1572869 - | glycine dehydrogenase subunit 2 TERM 1561 1572958 - 1572970 + g 73 -7.7 -3.88559 | TCACAGTTGTATGTG GTGCT TCT AGCAC TTTATCAGGATCATT TERM 1562 1573627 - 1573658 + g 77 -3.2 -5.41143 | gap 1 ATAATAGACCACCAG CATTATGGACGATTT CAC GGATT-TCCATAATG TTTTTTTCGAAAATA SA1366 1575680 - 1574334 - | glycine dehydrogenase subunit 1 SA1367 1576791 - 1575700 - | glycine cleavage system aminomethyltransferase T TERM 1563 1576846 - 1576813 - R 93 -11.9 -3.08211 | opp_overlap 1576819, overlap 1576819 ACCCCCTTAAAATTA TAAAAACAGGATAGC AATC GCTACCCTGTTTATA AATCACCAATTCAGG TERM 1564 1576840 - 1576819 - R 100 -10.9 -5.09245 | opp_overlap 1576819, overlap 1576813 TTAAAATTATAAAAA CAGGATAGC AATC GCTACCCTG TTTATAAATCACCAA TERM 1565 1576819 - 1576840 + r 82 -8.7 -3.91897 | opp_overlap 1576819 1576813 TTAAAATTATAAAAA CAGGATAGC AATC GCTACCCTG TTTATAAATCACCAA SA1368 1577474 - 1576950 - | hypothetical protein SA1369 1578204 - 1577707 - | hypothetical protein SA1370 1578421 - 1578122 - | hypothetical protein SA1371 1578842 - 1578408 - | hypothetical protein SA1372 1579143 - 1578832 - | exogenous DNA-binding protein comGC SA1373 1580227 - 1579157 - | hypothetical protein SA1374 1581173 - 1580199 - | hypothetical protein TERM 1566 1580997 - 1580983 - GR 76 -8.6 -3.51934 | overlap 1580981 TGCTGTGTAGAAACA TCAAGC CCA GCTTGA AACTTCATATAAACT TERM 1567 1581208 - 1581179 - R 100 -13.7 -5.43866 | opp_overlap 1581179 GAATCTTCAAAAAAA CACCTCCTACATA TAAT CACGTAGGAGGTG TTTTTATTACTTCAA TERM 1568 1581179 - 1581208 + r 100 -10.8 -5.1963 | opp_overlap 1581179 GAATCTTCAAAAAAA CACCTCCTACAT ATAATC ACGTAGGAGGTG TTTTTATTACTTCAA SA1375 1581848 - 1581225 - | hypothetical protein SA1376 1582174 - 1581845 - | hypothetical protein glcK 1583160 - 1582174 - | glucokinase TERM 1569 1582496 - 1582485 - G 77 -5.8 -4.72272 | TTGCCGCATCAAAAA CAGC TTTT GCTG TAACCTTATTTTCTT SA1378 1583360 - 1583157 - | hypothetical protein SA1379 1584804 - 1583341 - | hypothetical protein SA1380 1585355 - 1584816 - | hypothetical protein TERM 1570 1585501 - 1585529 + r 90 -7.5 -5.66229 | opp_overlap 1585501 GTGCATAATTAAAAA GGTGAAACCTC TTATTTT GAGATTTCACC TTTTTTATTGTTAAT TERM 1571 1585529 - 1585501 - R 100 -9.7 -4.93365 | opp_overlap 1585501 GTGCATAATTAAAAA GGTGAAACCTC TTATTTT GAGATTTCACC TTTTTTATTGTTAAT rpmG 1585713 - 1585564 - | 50S ribosomal protein L33 pbp3 1587901 - 1585826 - | penicillin-binding protein 3 TERM 1572 1586056 - 1586070 + g 73 -8.6 -3.25204 | overlap 1586054 1586061 TACCCGTTTTACCAG CAGTAG GTA CTACTG TATCTTTAAAACTAA TERM 1573 1588005 - 1587986 - R 100 -9.3 -4.89054 | TTGACAAAAAAATAA CGGTCTC ATTTAA GAGACCG AACAAGTAATCATAC sodA 1588621 - 1588022 - | superoxide dismutase SodA TERM 1574 1588294 - 1588317 + g 72 -2.5 -5.31275 | opp_overlap 1588289 1588299, overlap 1588295 CTTTTTTAAATTCTT CTAAAGAAC CCCATT GTTCTTTAA TTTTTTCTACTACAG TERM 1575 1588886 - 1588845 - R 84 -7 -5.1925 | gap 2, opp_overlap 1588838 1588845, overlap 1588837 CTATAATTTAAAAAA TGAGATTTATGCATACATCT GACC AAATGT--GCATAAATCTCA TTTCTTTATATTAAT TERM 1576 1588845 - 1588886 + r 80 -6.9 -4.69415 | opp_overlap 1588845 1588837, overlap 1588838 CTATAATTTAAAAAA TGAGATTTATGCATA CATCTGACCAAA TGTGCATAAATCTCA TTTCTTTATATTAAT SA1383 1589307 - 1588897 - | hypothetical protein SA1384 1590157 - 1589294 - | hypothetical protein SA1385 1590966 - 1590199 - | hypothetical protein SA1386 1592000 - 1591110 - | endonuclease IV SA1387 1593356 - 1592010 - | hypothetical protein TERM 1577 1592691 - 1592715 + g 84 -5.2 -5.45813 | ACCTTTAGTAGGTAT TAAAAAGAAT TCGAT GTTCTTTTTA TTTTGTTTTTTACTG TERM 1578 1593470 - 1593423 - R 73 -3.6 -5.28942 | opp_overlap 1593426 1593432 1593464, overlap 1593425 1593426 1593431 1593432 TATTTTAAATAAAAA TATTAAAACCTCGAAATTTCAA AATT TAGAAATCCCGAGATTTTAGTT TAAATATATTGAAAT TERM 1579 1593468 - 1593425 - R 72 -6.2 -4.27026 | opp_overlap 1593426 1593432 1593464, overlap 1593423 1593426 1593431 1593432 TTTTAAATAAAAATA TTAAAACCTCGAAATTTCAA AATT TAGAAATCCCGAGATTTTAG TTTAAATATATTGAA TERM 1580 1593467 - 1593426 - R 78 -9.7 -3.15131 | opp_overlap 1593426 1593432 1593464, overlap 1593425 1593423 1593431 1593432 TTTAAATAAAAATAT TAAAACCTCGAAATTTCAA AATT TAGAAATCCCGAGATTTTA GTTTAAATATATTGA TERM 1581 1593462 - 1593431 - R 70 -5.2 -4.62102 | opp_overlap 1593426 1593432, overlap 1593426 1593425 1593423 1593432 ATAAAAATATTAAAA CCTCGAAATTTCAA AATT TAGAAATCCCGAGA TTTTAGTTTAAATAT SA1388 1594570 - 1593470 - | hypothetical protein TERM 1582 1593496 - 1593525 + g 77 -3 -5.47431 | opp_overlap 1593499, overlap 1593500 1593502 GAAATGGATCTGTAT TAATTGTAGATG CTTCAA CATCTATATTTA TTTTTTCTATATTGA TERM 1583 1593500 - 1593521 + g 73 -3.8 -5.16969 | opp_overlap 1593499, overlap 1593496 1593502 TGGATCTGTATTAAT TGTAGATG CTTCAA CATCTATA TTTATTTTTTCTATA SA1389 1595250 - 1594573 - | hypothetical protein TERM 1584 1595303 - 1595273 - R 93 -8.5 -5.14563 | gap 1 TCCTTTATGAAAAAA GAGGTTGA-ACATT ATTC AATGTACCAACCTC ACTCAAGTTAAATCT sigA 1596487 - 1595381 - | RNA polymerase sigma factor RpoD dnaG 1598528 - 1596711 - | DNA primase SA1392 1599407 - 1598589 - | hypothetical protein SA1393 1600041 - 1599418 - | hypothetical protein TERM 1585 1600300 - 1600350 + H 100 -13 -4.39166 | gap 2, opp_overlap 1600299 1600312 1600317 TTTAAAATATTAACT CGTCCCATGGAA-GTAA-AGCATA TTTAC TATGCTGTTATTTTCCATGGGGCG TTTTCATGTATGAGG glyS 1600376 - 1601767 + | glycyl-tRNA synthetase TERM 1586 1601846 - 1601815 - T 77 -6 -4.93318 | opp_overlap 1601815 1601810 TATAATTTATAAAAA GAGATACTGG TTAGTAAAATTG CCAGTATCTC TTTTCTATTCAAAAA TERM 1587 1601815 - 1601846 + T 85 -8.2 -4.66537 | gap 1, opp_overlap 1601815, overlap 1601810 TATAATTTATAAAAA GAGATACTGGTTAGT AAA ATTG-CCAGTATCTC TTTTCTATTCAAAAA TERM 1588 1601857 - 1601906 + T 85 -8.1 -4.47977 | opp_overlap 1601862, overlap 1601862 ATCTCTTTTCTATTC AAAAAGGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACCTTTTA TTATTTTATGTTATT TERM 1589 1601901 - 1601862 - T 100 -12.4 -4.65895 | opp_overlap 1601857 1601862 TTTTCTATTCAAAAA GGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACC TTTTATTATTTTATG TERM 1590 1601862 - 1601901 + T 90 -8 -5.12916 | opp_overlap 1601862, overlap 1601857 TTTTCTATTCAAAAA GGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACC TTTTATTATTTTATG SA1395 1602669 - 1601917 - | hypothetical protein era 1603590 - 1602691 - | GTP-binding protein Era cdd 1603995 - 1603591 - | cytidine deaminase SA1398 1604350 - 1604006 - | hypothetical protein SA1399 1604820 - 1604353 - | hypothetical protein phoH 1605768 - 1604821 - | hypothetical protein TERM 1591 1605263 - 1605279 + g 72 -8 -3.44552 | AATCCAAGTGACTCT CCTGCT TCAAC AGCAGG TCTTGTTAATACAAT TERM 1592 1606058 - 1606031 - R 90 -6.4 -5.53288 | gap 1, opp_overlap 1606031 CTTAACGTAAAAAAA CAAGCAACTACCA TTA CGATAGT-GCTTG TTTTCAAAAAATTTT SA1401 1606770 - 1606072 - | hypothetical protein SA1402 1607776 - 1606787 - | hypothetical protein SA1403 1608501 - 1607794 - | hypothetical protein TERM 1593 1608441 - 1608405 - G 83 -6.9 -4.76892 | gap 1, overlap 1608407 ATATTAACGTAAAAA TAGGTTGAACAA-TTA TATTAC TAACTTGTTCAACCCA AGTATCTCCAGCCGT TERM 1594 1608439 - 1608407 - G 73 -7.3 -3.99461 | gap 1, overlap 1608405 ATTAACGTAAAAATA GGTTGAACAA-TTA TATTAC TAACTTGTTCAACC CAAGTATCTCCAGCC TERM 1595 1608669 - 1608635 - R 100 -13.8 -5.88565 | opp_overlap 1608635 TTGACAACAAAAAAA CATCACATATTAGTGT CAG ACACTAACTTGTGATG TTTATTTTATATAAT TERM 1596 1608635 - 1608669 + r 100 -11.6 -4.84146 | opp_overlap 1608635 TTGACAACAAAAAAA CATCACATATTAGTGT CAG ACACTAACTTGTGATG TTTATTTTATATAAT rpsU 1608897 - 1608721 - | 30S ribosomal protein S21 TERM 1597 1608994 - 1609007 + r 81 -3.9 -5.63517 | opp_overlap 1609006 TCTGTAATTTATGGT CAATT AGTA AATTG TTTTTTATTTGAAAC TERM 1598 1609071 - 1609046 - R 70 -5.6 -4.22407 | opp_overlap 1609034 1609046 CATCAAAATCACAAA GACTTTTAGA TTTTGT TCTAAAAATC TCTTAATAATTTATT SA1405 1610536 - 1609190 - | hypothetical protein SA1406 1611295 - 1610543 - | hypothetical protein TERM 1599 1611269 - 1611252 - G 100 -7.7 -5.7946 | opp_overlap 1611252 TTTGTAATAAAAAAA CGCTGAC TTAC ATCAGCG TTTTGGTCTATGAAA TERM 1600 1611252 - 1611269 + g 78 -7 -4.39166 | opp_overlap 1611252 TTTGTAATAAAAAAA CGCTGA CTTACA TCAGCG TTTTGGTCTATGAAA SA1407 1612235 - 1611297 - | hypothetical protein TERM 1601 1611499 - 1611518 + g 70 -2.2 -5.22289 | opp_overlap 1611499 ATATGCGCTAAAATA TTTGCTAT TACA ATATCAAA TTTTTCTGTTTCGTC TERM 1602 1611882 - 1611906 + g 81 -8 -4.11692 | opp_overlap 1611886 CTTCGACGCTCGGAA TGGATGGAAA TAGTT TTTCCATTCA TTTTCCCAATCCGTC dnaJ 1613378 - 1612239 - | DnaJ protein TERM 1603 1613481 - 1613441 - R 100 -12.2 -3.70149 | opp_overlap 1613447, overlap 1613447 GTCATACTATCCAAA TAAAAAGCCAAAGCCAAT GTTCT ATTGACTTTGACTTTTCA GATCATGACAACATT TERM 1604 1613475 - 1613447 - R 100 -9 -5.30616 | opp_overlap 1613447, overlap 1613441 CTATCCAAATAAAAA GCCAAAGCCAAT GTTCT ATTGACTTTGAC TTTTCAGATCATGAC dnaK 1615346 - 1613514 - | DnaK protein grpE 1616041 - 1615415 - | GrpE protein hrcA 1617050 - 1616073 - | heat-inducible transcriptional repressor TERM 1605 1616125 - 1616147 + g 71 -6.3 -4.25074 | TAATGCATAGCTGTA GGTCCAATC ACAGC GATTTGACC TTTTAACGTTTCATC TERM 1606 1616405 - 1616428 + g 83 -8.4 -4.28111 | TATGATTATTCATCG TATTTATCAA TTTA TTGATAAATA TTTCTTCCTGCTCTG hemN 1618275 - 1617151 - | coproporphyrinogen III oxidase TERM 1607 1618534 - 1618512 - H 81 -5.6 -5.26119 | overlap 1618513 1618515 TCCTTAAAAATAAAA TTACATGAGT AAA ACTCATGCAT AAGGGAGTGGGACAG TERM 1608 1618533 - 1618513 - H 84 -9.1 -3.74587 | overlap 1618512 1618515 CCTTAAAAATAAAAT TACATGAGT AAA ACTCATGCA TAAGGGAGTGGGACA TERM 1609 1618531 - 1618515 - H 79 -9.5 -3.43674 | overlap 1618513 1618512 TTAAAAATAAAATTA CATGAGT AAA ACTCATG CATAAGGGAGTGGGA TERM 1610 1618607 - 1618626 + G 74 -9.4 -3.09273 | opp_overlap 1618611, overlap 1618611 CTTGCATTGTCTGTA GAAATTGG GAAT CCAATTTC TCTGTGTTGGGGCCC TERM 1611 1618632 - 1618651 + G 77 -9.3 -3.20164 | ATCCAATTTCTCTGT GTTGGGG CCCACA CCCCAAC TTGCATTGCCTGTAG SAS048 1618552 - 1618710 + | hypothetical protein lepA 1620664 - 1618841 - | GTP-binding protein LepA TERM 1612 1619014 - 1619028 + g 72 -2.9 -5.36965 | CCATTGATTTAATAT TTGTA CGCGC TACAA TTTTTTGTCCTATTG TERM 1613 1620856 - 1620872 + H 81 -8.1 -4.23213 | opp_overlap 1620852 TATAAAACGTATTGA TTGTGTT TCC AACACAA TTTATTAAATCTGCA rpsT 1621010 - 1621261 + | 30S ribosomal protein S20 TERM 1614 1621272 - 1621301 + T 100 -15.3 -5.252 | opp_overlap 1621272 1621277, overlap 1621277 AATAATCTTTTTAAA TAAAAGTTCAAGC GCAT GCTTGAACTTTTA TTTTTTATAAAGATA TERM 1615 1621301 - 1621272 - T 100 -15.3 -3.56366 | opp_overlap 1621272 1621277, overlap 1621277 AATAATCTTTTTAAA TAAAAGTTCAAGC GCAT GCTTGAACTTTTA TTTTTTATAAAGATA TERM 1616 1621296 - 1621277 - T 100 -10.8 -4.86731 | opp_overlap 1621277 1621272, overlap 1621272 TCTTTTTAAATAAAA GTTCAAGC GCAT GCTTGAAC TTTTATTTTTTATAA TERM 1617 1621277 - 1621296 + T 100 -10.8 -5.49579 | opp_overlap 1621272 1621277, overlap 1621272 TCTTTTTAAATAAAA GTTCAAGC GCAT GCTTGAAC TTTTATTTTTTATAA holA 1622280 - 1621306 - | DNA polymerase III subunit delta TERM 1618 1622069 - 1622088 + g 76 -3.6 -5.36441 | opp_overlap 1622069, overlap 1622085 CCTGTAAATATATAT GCATTTTT AACC AAAATTGC TTTTTTATCTGAAAA SA1416 1624538 - 1622337 - | hypothetical protein TERM 1619 1624226 - 1624204 - G 76 -6.5 -4.54727 | TTCTTTAAATCAAAA TTCTTTTTA TCTGT TAAAAAGAA AGGATATATTTCATT TERM 1620 1624512 - 1624473 - G 73 -4.5 -4.86613 | gap 1 TAAAATGAAAAGAAA TGTAGAGAGCACTTTG CTAGAATTC CAAAGCACTC-CTACA ATCATTGATAACGCG comEB 1625004 - 1624543 - | late competence operon required for DNA binding and uptake comEB SA1418 1625773 - 1625096 - | hypothetical protein TERM 1621 1625773 - 1625819 + g 79 -4 -5.42198 | gap 2, opp_overlap 1625774 1625779, overlap 1625774 ATAAAAATTGATACA ATAAAACCACTC-CTCA-ACTT TATAC ACGTCTGAGCGAGTGGTTTTAC TTTTATTTTTTCGCA TERM 1622 1625774 - 1625818 + r 71 -7.5 -3.83692 | gap 2, opp_overlap 1625774 1625779, overlap 1625773 TAAAAATTGATACAA TAAAACCACTC-CTCA-ACTT TATAC ACGTCTGAGCGAGTGGTTTTA CTTTTATTTTTTCGC SA1419 1626538 - 1625822 - | hypothetical protein SA1420 1626894 - 1626541 - | hypothetical protein SA1421 1627479 - 1626895 - | hypothetical protein SA1422 1628038 - 1627469 - | hypothetical protein SA1423 1628331 - 1628041 - | hypothetical protein aroE 1629141 - 1628335 - | shikimate 5-dehydrogenase SA1425 1630255 - 1629155 - | GTP-binding protein YqeH TERM 1623 1630176 - 1630192 + g 76 -4.4 -5.05037 | overlap 1630177 CGAAACATATTATGC TCTGGT ACAAA ACCAGG TTTATTTTTATCTTC SA1426 1630783 - 1630256 - | hypothetical protein pfs 1631489 - 1630803 - | 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase TERM 1624 1630990 - 1631003 + g 86 -5.3 -5.59502 | ATTTCAACCGCCATC GCATT TGGA AATGC TTTTTTAATTTTTTG SA1428 1631803 - 1632072 + | hypothetical protein SA1429 1632462 - 1632274 - | hypothetical protein SA1430 1633084 - 1632611 - | hypothetical protein TERM 1625 1633242 - 1633224 - R 100 -14.6 -3.20164 | CTACAGGCAATGCAA GTTGGGGC GGG GCCCCAAC ATAGAAGCTGGCGGA TERM 1626 1633337 - 1633357 + r 93 -11.3 -3.61527 | opp_overlap 1633341 AATTAGTATTTCTTA TACATGAGT TTT ACTCATGTA TTCCTATTTTTAAGT TERM 1627 1633395 - 1633374 - R 89 -11.7 -2.72344 | opp_overlap 1633378, overlap 1633376 1633378 TCCTATTTTTAAGTA CACATTAGC TGTG GCTAATGTG TAAGAACCACTACAT TERM 1628 1633593 - 1633609 + r 71 -2.3 -5.42605 | opp_overlap 1633590 AACAGTATATCAGAA AAAATGA TAA TCATTTC TTTTATTTTTATTAA TERM 1629 1633713 - 1633687 - R 81 -5.9 -5.27206 | GATACACAACAAAAA GAGCAGTACAT TTGTC ATGCACCACTC TCAACAAATATATTT SA1431 1635011 - 1633791 - | hypothetical protein TERM 1630 1635190 - 1635164 - R 81 -5.9 -5.22006 | TCATCACAACAAAAA GAGCAGTACAT TTGTC ATGCACCACTC TCCCTTAAAATATAT SA1432 1636529 - 1635300 - | hypothetical protein SA1433 1637294 - 1636542 - | hypothetical protein SA1434 1638655 - 1637294 - | hypothetical protein SA1435 1639118 - 1638669 - | hypothetical protein SA1436 1640130 - 1639120 - | hypothetical protein TERM 1631 1639965 - 1639945 - G 70 -6.9 -3.72695 | ATTTTGCGTATTAAA TTGAATGGT AGG ACCAATCAA AGTATATTCAATCGC SA1437 1640854 - 1640120 - | hypothetical protein TERM 1632 1641058 - 1641095 + r 86 -6.3 -5.46698 | AGGTTCTGCTATCAT TCGGTCTGATGGAAAAT TTTT ACTTTTCATCTGTCCGA TTTTTTGATTTTGAA TERM 1633 1641156 - 1641120 - R 95 -8.1 -5.47159 | TTTGAATATAAAAAA GCACGACCGAAGTAT CATTAAC ACACTTCAATCGCGC AATTAAACAATCTAT greA 1641656 - 1641180 - | transcription elongation factor udk 1642307 - 1641684 - | uridine kinase SA1440 1643575 - 1642307 - | hypothetical protein TERM 1634 1643470 - 1643453 - G 70 -4.1 -4.68593 | TTGACCACCTAAAAA TACGGCA TCAG CGCCATA ATGTACTGCTATTTT SA1441 1644510 - 1643587 - | hypothetical protein SA1442 1645151 - 1644513 - | hypothetical protein TERM 1635 1645423 - 1645388 - R 100 -9.1 -5.47218 | opp_overlap 1645422 CTTGACTTAAAAAAA TACTCTTGCCTACCC ATCTTA AGGTTAGCAAGAGTA AAATCTTTTTAATTA SA1443 1645744 - 1645436 - | hypothetical protein SA1444 1646130 - 1645759 - | hypothetical protein TERM 1636 1646173 - 1646190 + r 71 -5.7 -4.45807 | opp_overlap 1646172 1646173 1646187, overlap 1646181 1646187 ATCGAGTCCTAAAAT TTTATGT TGTA ACATAAA TTATTTATTTTGCTC SA1445 1646451 - 1646191 - | hypothetical protein alaS 1649144 - 1646514 - | alanyl-tRNA synthetase TERM 1637 1649289 - 1649265 - R 89 -3.5 -6.04324 | overlap 1649238 TTAAAAAATAAAAAA CGCCCATCC TCAAAAG GGACGAACG TTATCGCGGTACCAC SA1447 1651964 - 1649487 - | hypothetical protein SA1448 1652634 - 1651966 - | hypothetical protein TERM 1638 1653003 - 1652987 - R 72 -8 -3.70149 | opp_overlap 1652987 TGCACATTATTGAAA GCTGAC TTTTG GTCAGC TTCTATGTTGGGGGC TERM 1639 1652987 - 1653003 + r 77 -8.7 -3.68024 | opp_overlap 1652987 TGCACATTATTGAAA GCTGACT TTT GGTCAGC TTCTATGTTGGGGGC TERM 1640 1653010 - 1653030 + r 100 -13.3 -3.20878 | TTGGTCAGCTTCTAT GTTGGGGGC CCC GTCCCCAAC TTCCATTGCCTGTTG TERM 1641 1653101 - 1653120 + r 76 -9.4 -3.09273 | opp_overlap 1653105, overlap 1653105 CTTCCATTGCCTGTT GAAATTGG GGTT CCAATTTC TCTATGTTGGGGCCC TERM 1642 1653126 - 1653145 + r 76 -9.3 -3.20164 | TTCCAATTTCTCTAT GTTGGGG CCCCGT CCCCAAC TTCCATTGCCTGTAG TERM 1643 1653246 - 1653207 - R 79 -9.4 -3.41024 | opp_overlap 1653212 1653214, overlap 1653205 1653208 CCCGCCAATATAACA TTGTAGAGCCTAGGACAT TGTG ATGTCCCAGACTCTATCA TCATGAATTATTCTC TERM 1644 1653246 - 1653208 - R 100 -12.7 -2.64293 | gap 1, opp_overlap 1653212 1653214, overlap 1653207 1653205 CCGCCAATATAACAT TG-TAGAGCCTAGGACAT TGTG ATGTCCCAGACTCTATCA TCATGAATTATTCTC TERM 1645 1653212 - 1653241 + r 74 -9.3 -2.83641 | opp_overlap 1653207 1653208 1653205, overlap 1653214 CAATATAACATTGTA GAGCCTAGGACAT TGTG ATGTCCCAGACTC TATCATCATGAATTA SA1449 1654447 - 1653329 - | (5-methylaminomethyl-2-thiouridylate)-methyltran sferase SA1450 1655590 - 1654448 - | hypothetical protein SA1451 1655902 - 1656915 + | hypothetical protein TERM 1646 1657116 - 1657058 - T 70 -6.2 -4.08919 | gap 2, opp_overlap 1657065 1657082, overlap 1657060 1657065 AAATTCTAAAGCAAA TATGAAAGCGCCCCTTCAACTTTACACT GTGTT AGTGTTTATTTGATGGGGCGCTTTC--A AAATATTGAAAAGCA TERM 1647 1657116 - 1657060 - T 100 -18.2 -3.62756 | opp_overlap 1657065 1657082, overlap 1657058 1657065 ATTCTAAAGCAAATA TGAAAGCGCCCCTTCAACTTTACACT GTGTT AGTGTTTATTTGATGGGGCGCTTTCA AAATATTGAAAAGCA TERM 1648 1657065 - 1657111 + T 100 -13 -3.6106 | opp_overlap 1657065 1657058 1657060, overlap 1657082 AAAGCAAATATGAAA GCGCCCCTTCAACTTTACACTG TGT TAGTGTTTATTTGATGGGGCGC TTTCAAAATATTGAA TERM 1649 1657111 - 1657065 - T 100 -12.3 -4.05229 | opp_overlap 1657065 1657082, overlap 1657058 1657060 AAAGCAAATATGAAA GCGCCCCTTCAACTTTACACT GTGTT AGTGTTTATTTGATGGGGCGC TTTCAAAATATTGAA SAS049 1657298 - 1657152 - | hypothetical protein csbD 1657520 - 1657338 - | sigmaB-controlled gene product TERM 1650 1657528 - 1657565 + r 85 -10.7 -3.0701 | opp_overlap 1657528 TCTGCCATAGTGAAA CCTCCTTGGATGTATAT ATTT ATATACCACTAAGGAGG TTCGCTAAACATTAT TERM 1651 1657565 - 1657528 - R 77 -8.5 -3.70902 | opp_overlap 1657528 TCTGCCATAGTGAAA CCTCCTTGGATGTATAT ATTT ATATACCACTAAGGAGG TTCGCTAAACATTAT SA1453 1658042 - 1657620 - | hypothetical protein SA1454 1658127 - 1659401 + | recombination factor protein RarA TERM 1652 1659505 - 1659449 - T 79 -10.5 -3.00039 | gap 1, opp_overlap 1659449 1659454, overlap 1659454 TAGCTATAATCAAAT CAAAACTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAGTTTTA GTTTTATGGTGTGGT TERM 1653 1659449 - 1659505 + T 72 -8.3 -3.30505 | gap 1, opp_overlap 1659449 1659454, overlap 1659454 TAGCTATAATCAAAT CAAAACTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAGTTTTA GTTTTATGGTGTGGT TERM 1654 1659500 - 1659454 - T 85 -8.2 -4.62957 | gap 1, opp_overlap 1659449 1659454, overlap 1659449 ATAATCAAATCAAAA CTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAG TTTTAGTTTTATGGT TERM 1655 1659454 - 1659500 + T 87 -8.2 -4.74012 | gap 1, opp_overlap 1659454 1659449, overlap 1659449 ATAATCAAATCAAAA CTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAG TTTTAGTTTTATGGT SA1455 1660335 - 1659562 - | hypothetical protein TERM 1656 1660524 - 1660502 - R 100 -15 -4.95896 | overlap 1660492 AGAAACGCATAAAAA TACGCAAGAC AAA GTCTTGCGTA TCGATAGAGTCCGTA SAS050 1660650 - 1660549 - | hypothetical protein aspS 1662562 - 1660796 - | aspartyl-tRNA synthetase hisS 1663840 - 1662578 - | histidyl-tRNA synthetase TERM 1657 1663983 - 1663953 - R 90 -6.8 -5.56372 | overlap 1663941 1663954 1663981 AAAGCAAAAGAAAAA GCCCTTGCACAGCC TGA AACTGCACAAGGGA CGAATATCCGTGTTG TERM 1658 1663982 - 1663954 - R 93 -10.3 -3.90163 | overlap 1663941 1663953 1663981 AAGCAAAAGAAAAAG CCCTTGCACAGCC TGA AACTGCACAAGGG ACGAATATCCGTGTT lytH 1665176 - 1664301 - | N-acetylmuramoyl-L-alanine amidase TERM 1659 1664571 - 1664592 + g 79 -10.3 -2.92712 | overlap 1664586 AACTGTCATTCCATT TGCATTAGA TGAT TCTAATGCA TCATTATGTATACTC SA1459 1665625 - 1665173 - | D-tyrosyl-tRNA deacylase TERM 1660 1665472 - 1665483 + g 73 -4.4 -4.90525 | CATCTTCAAATAATC TTGC ATTA GCAA TTTTCTTTGCAATTA relA 1667826 - 1665637 - | GTP pyrophosphokinase TERM 1661 1668171 - 1668151 - R 100 -7.7 -5.68438 | TCAGTAAATAAAAAA TCCTAACAT CTC ATGTTAAGA AAACTTAAACAACTT apt 1668772 - 1668254 - | adenine phosphoribosyltransferase SA1462 1671067 - 1668794 - | hypothetical protein TERM 1662 1671225 - 1671259 + r 83 -10.2 -3.54177 | opp_overlap 1671225, overlap 1671221 TAAATAAAGTAAAAA GCGGTATGTGAA CTCTTTATTGT TTCACATACCGC TTAATTCATTTTAAA TERM 1663 1671259 - 1671225 - R 100 -10.2 -5.13137 | opp_overlap 1671221 1671225 TAAATAAAGTAAAAA GCGGTATGTGAA CTCTTTATTGT TTCACATACCGC TTAATTCATTTTAAA secF 1673549 - 1671270 - | bifunctional preprotein translocase subunit SecD/SecF TERM 1664 1671819 - 1671831 + g 85 -6.3 -5.2189 | opp_overlap 1671819 CGATGCATAGATTAA TGCAA GCA TTGCA TTTTTTGCTAATTCC TERM 1665 1673804 - 1673780 - R 100 -13 -4.78149 | opp_overlap 1673780 CTTATAACTTAAAAA GGATGAAACG CTATT CGTTTCATCC TTTTTAATACCACTT TERM 1666 1673780 - 1673804 + r 100 -13 -4.73388 | opp_overlap 1673780 CTTATAACTTAAAAA GGATGAAACG CTATT CGTTTCATCC TTTTTAATACCACTT SA1464 1674084 - 1673824 - | hypothetical protein tgt 1675242 - 1674103 - | queuine tRNA-ribosyltransferase TERM 1667 1674355 - 1674367 + g 80 -6.3 -4.7497 | CGGTCTTAAATCATC TGCAA ATT TTGCA TTTTTAATAACTAAA queA 1676290 - 1675265 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase ruvB 1677296 - 1676292 - | Holliday junction DNA helicase B ruvA 1677930 - 1677328 - | holliday junction DNA helicase SA1469 1678402 - 1677944 - | hypothetical protein obgE 1679704 - 1678412 - | GTPase ObgE TERM 1668 1679796 - 1679757 - R 72 -8.8 -2.90382 | gap 1, opp_overlap 1679760, overlap 1679752 1679760 AATAATTATAGCATA TTAGAGCCCCTTATATATT GTA AATA-ATTAGGGGCTCTTA TGCAGTTGCTTTTAA TERM 1669 1679760 - 1679793 + r 83 -10.5 -3.3858 | gap 1, opp_overlap 1679760 1679757 1679752 AATTATAGCATATTA GAGCCCCTTATATATT GTA AATA-ATTAGGGGCTC TTATGCAGTTGCTTT TERM 1670 1679793 - 1679760 - R 78 -10.5 -2.69178 | gap 1, opp_overlap 1679760, overlap 1679757 1679752 AATTATAGCATATTA GAGCCCCTTATATATT GTA AATA-ATTAGGGGCTC TTATGCAGTTGCTTT TERM 1671 1680043 - 1680021 - R 100 -12.1 -5.56112 | opp_overlap 1680021 1680023 ATAAAAAGTAAAAAA CACCAGAAG ATTCA CTTCTGGTG TTAACTAGACAAAAT TERM 1672 1680021 - 1680043 + r 93 -12.1 -3.05463 | opp_overlap 1680021, overlap 1680023 ATAAAAAGTAAAAAA CACCAGAAG ATTCA CTTCTGGTG TTAACTAGACAAAAT TERM 1673 1680023 - 1680041 + r 73 -8.9 -3.08679 | opp_overlap 1680021, overlap 1680021 AAAAAGTAAAAAACA CCAGAAG ATTCA CTTCTGG TGTTAACTAGACAAA rpmA 1680342 - 1680058 - | 50S ribosomal protein L27 TERM 1674 1680245 - 1680261 + g 78 -7.3 -4.41494 | AATTGACCGTCAGCA CGTTTAG CAC CTAAGCG TTTTGATTCAGAGTC SA1472 1680674 - 1680354 - | hypothetical protein rplU 1680988 - 1680680 - | 50S ribosomal protein L21 TERM 1675 1681247 - 1681257 + r 75 -4 -5.20328 | overlap 1681228 GACGACGTTTCATGT CAAT GTC ATTG TTTGTTTTTTTAAGG SA1474 1681754 - 1681224 - | hypothetical protein SA1475 1682596 - 1681754 - | hypothetical protein SA1476 1683461 - 1682988 - | hypothetical protein SA1477 1683621 - 1683818 + | hypothetical protein SA1478 1684219 - 1683935 - | hypothetical protein TERM 1676 1684534 - 1684581 + r 76 -2.8 -5.57396 | opp_overlap 1684538, overlap 1684535 1684537 1684538 TATTTCAAAAATAGT AAAACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGCTGA TTTTTTATTCATTGT TERM 1677 1684537 - 1684578 + r 76 -8.9 -3.51774 | opp_overlap 1684538, overlap 1684535 1684534 1684538 TTCAAAAATAGTAAA ACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGC TGATTTTTTATTCAT TERM 1678 1684538 - 1684577 + r 100 -12.4 -2.69438 | opp_overlap 1684538, overlap 1684537 1684535 1684534 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA TERM 1679 1684577 - 1684538 - R 100 -14.6 -4.60746 | opp_overlap 1684537 1684535 1684534 1684538 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA SA1479 1685330 - 1684668 - | hypothetical protein TERM 1680 1684811 - 1684833 + g 82 -4.2 -5.45652 | ATGATTTAGATGTGT TGTGATTATA AAT TCTAATCGCA TTTTTTATTCCAAAT TERM 1681 1685821 - 1685783 - H 74 -9.2 -2.86315 | overlap 1685755 1685782 1685778 CAAATCAAAATTAAT TGGTTATAATGAAC GCTTAATGTCA GTTCATTATAACCA GTAAGGAGAAGGTTA ermA 1685864 - 1686595 + | rRNA methylase Erm(A) TERM 1682 1686643 - 1686602 - T 75 -7.5 -4.10552 | gap 1, opp_overlap 1686606 1686610, overlap 1686606 1686610 TTTCACTAAATTAAA GTAATAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTATT-C TTCCCAAAAATTGTT TERM 1683 1686640 - 1686606 - T 81 -9.4 -3.66117 | opp_overlap 1686606 1686610, overlap 1686602 1686610 ACTAAATTAAAGTAA TAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTA TTCTTCCCAAAAATT TERM 1684 1686606 - 1686640 + T 81 -9.5 -3.61894 | opp_overlap 1686606 1686602 1686610, overlap 1686610 ACTAAATTAAAGTAA TAAAGCGTTCTCT AATTTCACA AGAGGACGCTTTA TTCTTCCCAAAAATT TERM 1685 1686636 - 1686610 - T 71 -5.8 -4.42206 | opp_overlap 1686610 1686606, overlap 1686606 1686602 AATTAAAGTAATAAA GCGTTCTCTAAT TTC ACAAGAGGACGC TTTATTCTTCCCAAA TERM 1686 1686610 - 1686636 + T 71 -5.9 -4.44667 | opp_overlap 1686606 1686602 1686610, overlap 1686606 AATTAAAGTAATAAA GCGTTCTCT AATTTCACA AGAGGACGC TTTATTCTTCCCAAA ant(9) 1687503 - 1686721 - | O-nucleotidylltransferase(9) tnpC 1688031 - 1687654 - | transposase C for Tn554 tnpB 1689930 - 1688038 - | transposase B for Tn554 tnpA 1691012 - 1689927 - | transposase A for Tn554 radC 1691685 - 1691131 - | hypothetical protein SA1486 1692389 - 1691682 - | hypothetical protein TERM 1687 1692644 - 1692599 - R 82 -5 -5.34555 | gap 1, opp_overlap 1692616 TTAGAGCATAAAAAA TAACCATGAAG-CTCTACCTA TTGAT TAAATAGATTCTTCATGGCTA TTTTAGTTTTAGTTT folC 1693930 - 1692659 - | folylpolyglutamate synthase valS 1696573 - 1693943 - | valyl-tRNA synthetase TERM 1688 1694484 - 1694502 + g 70 -4.6 -4.67943 | overlap 1694486 ATTGTGTCACCTTCA TGTGGTAA ACT TTGCCATA TTTTCTCTGTTACAA TERM 1689 1696630 - 1696601 - H 100 -10.2 -5.86609 | opp_overlap 1696601 1696603, overlap 1696620 1696625 CTAAAAAAATAAAAA TATCCATCCTAT ATACAA ATAGGACGGATA TTCCGTGGTACCACC tag 1696976 - 1697536 + | DNA-3-methyladenine glycosidase SA1490 1698832 - 1697759 - | hypothetical protein SAS051 1698955 - 1698866 - | hypothetical protein TERM 1690 1698984 - 1699014 + r 71 -6.8 -3.98204 | opp_overlap 1698988, overlap 1698985 1698988 CCTGATATACATTTA AAAAGAGCCTGAAC AAA GTTCAGGCTCTCAA TTTGTCCGTATATTT TERM 1691 1698985 - 1699013 + r 79 -10.3 -2.97838 | opp_overlap 1698988, overlap 1698984 1698988 CTGATATACATTTAA AAAGAGCCTGAAC AAA GTTCAGGCTCTCA ATTTGTCCGTATATT TERM 1692 1699010 - 1698988 - R 100 -16.4 -4.73448 | opp_overlap 1698985 1698984 1698988 ATATACATTTAAAAA GAGCCTGAAC AAA GTTCAGGCTC TCAATTTGTCCGTAT TERM 1693 1698988 - 1699010 + r 100 -16.4 -2.71593 | opp_overlap 1698988, overlap 1698985 1698984 ATATACATTTAAAAA GAGCCTGAAC AAA GTTCAGGCTC TCAATTTGTCCGTAT hemL 1700314 - 1699028 - | glutamate-1-semialdehyde aminotransferase TERM 1694 1699549 - 1699533 - G 70 -7.3 -3.81027 | CCTAAGCAAGTTAAA TCTGGTG TCA CACCAAA GTAACCTTGTGCACA hemB 1701336 - 1700362 - | delta-aminolevulinic acid dehydratase hemD 1702007 - 1701339 - | uroporphyrinogen III synthase hemC 1702955 - 1702029 - | porphobilinogen deaminase hemX 1703812 - 1702997 - | hemA concentration negative effector hemX TERM 1695 1703683 - 1703655 - G 83 -8.3 -4.40232 | ATAAAAATAGATAAA GAGATTGTTTG TAAAACC CAAACAATCCC CAATAAATATATGCC hemA 1705180 - 1703834 - | glutamyl-tRNA reductase SA1497 1705987 - 1705397 - | GTPase EngB TERM 1696 1706069 - 1706114 + r 82 -7.8 -4.4595 | gap 1, opp_overlap 1706069, overlap 1706064 ATACATTATAAAAAA GCTCCGATCAAAGTT-AAACT ATTTG AGCGTCAACTTTGATTGGAGC TTTTCACTTTTATAA TERM 1697 1706114 - 1706069 - R 100 -10 -5.35459 | gap 1, opp_overlap 1706064 1706069 ATACATTATAAAAAA GCTCCGATCAAAGTTAA-ACT ATTTG AGCGTCAACTTTGATTGGAGC TTTTCACTTTTATAA clpX 1707403 - 1706141 - | ATP-dependent protease ATP-binding subunit TERM 1698 1707147 - 1707163 + g 83 -5.9 -5.06816 | opp_overlap 1707139 TTATAAACAGCTACA GCTAAAG ATT TTTTAGC TTTTTCTTGACCAAT TERM 1699 1707491 - 1707525 + r 93 -11.6 -3.6151 | opp_overlap 1707491 1707493, overlap 1707491 1707493 TTTTTGCTTAAAGAA TAGTAGCAGATACATA AGC TATGCATCTGCTACTC ATTTTTGTAATTTAA TERM 1700 1707525 - 1707491 - R 100 -13.8 -3.90744 | opp_overlap 1707491 1707491 1707493, overlap 1707493 TTTTTGCTTAAAGAA TAGTAGCAGATACATA AGC TATGCATCTGCTACTC ATTTTTGTAATTTAA TERM 1701 1707491 - 1707526 + r 100 -10 -5.05228 | gap 1, opp_overlap 1707491 1707493, overlap 1707491 1707493 TTTTTGCTTAAAGAA T-AGTAGCAGATACATA AGC TATGCATCTGCTACTCA TTTTTGTAATTTAAT TERM 1702 1707523 - 1707493 - R 100 -16.4 -3.54488 | opp_overlap 1707493 1707491 1707491, overlap 1707491 TTTGCTTAAAGAATA GTAGCAGATACATA AGC TATGCATCTGCTAC TCATTTTTGTAATTT TERM 1703 1707493 - 1707523 + r 100 -14.2 -3.36613 | opp_overlap 1707491 1707493, overlap 1707491 1707491 TTTGCTTAAAGAATA GTAGCAGATACATA AGC TATGCATCTGCTAC TCATTTTTGTAATTT tig 1708855 - 1707554 - | trigger factor SA1500 1709947 - 1709018 - | hypothetical protein TERM 1704 1709252 - 1709263 + g 74 -3 -5.31519 | opp_overlap 1709252 TAATGTTTCCATAAC GTTA GGTA TAAC TTTTTCTTTCAGTGT TERM 1705 1709621 - 1709640 + g 72 -8 -3.4489 | overlap 1709616 TTTGTGATCTTTGAC TTCATCAA TAAT TTGATGAA TTACTTCTACCGCTT SA1501 1710574 - 1709966 - | hypothetical protein TERM 1706 1710681 - 1710699 + r 86 -7.4 -5.30686 | opp_overlap 1710681, overlap 1710671 TAAAAAAATAAAAAA GAGATGAC AAT GCCATCTC TTTTTTATAAGTGTT TERM 1707 1710699 - 1710681 - R 100 -9.6 -6.12458 | opp_overlap 1710681 1710671 TAAAAAAATAAAAAA GAGATGAC AAT GCCATCTC TTTTTTATAAGTGTT rplT 1711072 - 1710716 - | 50S ribosomal protein L20 rpmI 1711319 - 1711119 - | 50S ribosomal protein L35 infC 1711866 - 1711348 - | translation initiation factor IF-3 TERM 1708 1711942 - 1711912 - R 100 -19.2 -4.90266 | opp_overlap 1711912 1711916 TGCACCAAGCAAAAA GGAAGAGCAGGTAT AAA ATACCCGCTCTTCC TTATACACAGTTATG TERM 1709 1711912 - 1711942 + r 100 -17 -3.31799 | opp_overlap 1711912, overlap 1711916 TGCACCAAGCAAAAA GGAAGAGCAGGTAT AAA ATACCCGCTCTTCC TTATACACAGTTATG TERM 1710 1711916 - 1711938 + r 83 -10.6 -3.44325 | opp_overlap 1711912, overlap 1711912 CCAAGCAAAAAGGAA GAGCAGGTAT AAA ATACCCGCTC TTCCTTATACACAGT lysP 1713597 - 1712104 - | lysine-specific permease TERM 1711 1713727 - 1713697 - R 100 -12 -5.48054 | opp_overlap 1713697 ATTAAAAGTAAAAAA GTGGCTACATACCT TTA AGATATGCAACCAC TTTGGCAATTATCTA thrS 1715960 - 1714023 - | threonyl-tRNA synthetase TERM 1712 1716133 - 1716109 - R 100 -10 -6.12458 | GAAAAAAACAAAAAA TCCCGCCCCT ATACA AGGGACGAGA TCGTCGTGGTACCAC dnaI 1717293 - 1716373 - | primosomal protein DnaI dnaB 1718693 - 1717293 - | chromosome replication initiation/membrane attachment protein SA1509 1719164 - 1718694 - | transcriptional regulator NrdR TERM 1713 1719358 - 1719335 - R 100 -11.8 -6.04324 | opp_overlap 1719332 TTAAAAAATAAAAAA CCTAACTCCG AAGT CAGAGTTAGG CTATAAATTAATTGT gapB 1720400 - 1719375 - | glyceraldehyde 3-phosphate dehydrogenase 2 TERM 1714 1720484 - 1720495 + r 71 -3 -5.24531 | AAAGCGTTTTCCGTT GATA TATT TATC TTTTTTATAAAAAAT TERM 1715 1720554 - 1720510 - R 79 -5.3 -5.24129 | gap 1, opp_overlap 1720512, overlap 1720512 CTTTTTTATAAAAAA TAGTCATTACT-TACATACA TCAACG CGTACGTAAAGTAATGACTT ATTTATAGTGTAATA TERM 1716 1720552 - 1720512 - R 79 -7.9 -4.25873 | gap 1, opp_overlap 1720512, overlap 1720510 TTTTTATAAAAAATA GTCATTACT-TACATACA TCAACG CGTACGTAAAGTAATGAC TTATTTATAGTGTAA SA1511 1721193 - 1720570 - | dephospho-CoA kinase SA1512 1722081 - 1721209 - | formamidopyrimidine-DNA glycosylase polA 1724727 - 1722097 - | DNA polymerase I TERM 1717 1724113 - 1724129 + g 74 -5.9 -4.52589 | overlap 1724115 TGTGTCAAATTGGTT TAGCAAT TTT ATTGCTG TTTTCTCTCCAACAC TERM 1718 1724246 - 1724274 + g 76 -4 -5.23316 | gap 1, opp_overlap 1724246 1724255 TCCGCAATAAAGTCA GGTGTATAATGAT CAAC ATCAGTA-ACACC TTTTTTAGTGTAATA SA1514 1726508 - 1725021 - | hypothetical protein phoR 1728671 - 1727007 - | alkaline phosphatase synthesis sensor protein phoP 1729372 - 1728668 - | alkaline phosphatase synthesis transcriptional regulatory protein TERM 1719 1729582 - 1729594 + r 72 -6.3 -4.25458 | CCCACTACCTATGCA TGAGT TTT ACTCA TTTATTCCTAAGCTT TERM 1720 1729747 - 1729714 - R 100 -10.4 -4.68424 | opp_overlap 1729714 CAATTCATTTAAAAA GGCGAACCTAGCAA TTAAAG TTGCTAGACTCACC TAATTTTATTTTGCT citC 1731030 - 1729762 - | isocitrate dehydrogenase citZ 1732200 - 1731079 - | methylcitrate synthase aapA 1732548 - 1733909 + | D-serine/D-alanine/glycine transporter TERM 1721 1733922 - 1733953 + T 100 -12.4 -4.9725 | opp_overlap 1733910 TAACAACAAGTTTTA CCCCTGTTGAATAT ACTA AAGTTCAACAGGGG TTTTTATATGCAACT TERM 1722 1734244 - 1734214 - T 100 -10.6 -5.31059 | opp_overlap 1734214 AGATGAACCAAAAAA CGCCTTTCCATT GTTGATA AATGGAAAGACG TTTTTTTATAAATTA TERM 1723 1734214 - 1734244 + T 100 -8.4 -5.66684 | opp_overlap 1734214 AGATGAACCAAAAAA CGCCTTTCCATT GTTGATA AATGGAAAGACG TTTTTTTATAAATTA pykA 1736014 - 1734257 - | pyruvate kinase TERM 1724 1734713 - 1734731 + g 80 -10.4 -3.0119 | overlap 1734690 1734706 AACAGCTGTTGCAAC TGCATTGT TTA ACAATGCA TCTGTACTCTTACGT pfkA 1736959 - 1736036 - | 6-phosphofructokinase TERM 1725 1737172 - 1737143 - R 100 -10.2 -5.64006 | opp_overlap 1737143 1737158 ACTTAATTAAAAAAA GATTAGTAGCCA CAATTT TGACTACTAATC TTAGTTAAAATTCAG accA 1738217 - 1737273 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 1726 1737851 - 1737863 + g 72 -4.9 -4.78933 | CCATACCAAAATTTC GATAA ATA TTATC TTTTGTATCTTTTCC SA1523 1739074 - 1738217 - | acetyl-CoA carboxylase subunit beta TERM 1727 1738498 - 1738510 + g 78 -7.7 -4.11394 | TATATAATAGTCCAG CGTCA GAA TGACG TTTTAAAGATACACT TERM 1728 1739181 - 1739203 + r 74 -6.4 -4.42667 | TATTCGTTTGACTGT TGAATGTTTA TCA TAAACTTTCA TTTTCATCATTTTAA TERM 1729 1739249 - 1739265 + r 79 -5.3 -5.20333 | opp_overlap 1739252 AACTTTTAAGCAATT TAATTAA ACG TTAATTA TTTTTATTGTAAATC SA1524 1740498 - 1739269 - | hypothetical protein TERM 1730 1740920 - 1740880 - R 100 -11.4 -4.34766 | opp_overlap 1740881 1740886, overlap 1740881 AAAAACTAATATAAA CGCAAACTGATGGTTAAA AAATA TCTAACCATCAGTTTACT ATATCATAATTTATT TERM 1731 1740881 - 1740919 + r 79 -10.5 -2.99874 | opp_overlap 1740880 1740881, overlap 1740886 AAAACTAATATAAAC GCAAACTGATGGTTAAA AAATA TCTAACCATCAGTTTAC TATATCATAATTTAT TERM 1732 1740919 - 1740881 - R 100 -14.9 -3.18419 | opp_overlap 1740881 1740886, overlap 1740880 AAAACTAATATAAAC GCAAACTGATGGTTAAA AAATA TCTAACCATCAGTTTAC TATATCATAATTTAT TERM 1733 1740886 - 1740914 + r 82 -9 -3.89956 | opp_overlap 1740881 1740880, overlap 1740881 TAATATAAACGCAAA CTGATGGTTAAA AAATA TCTAACCATCAG TTTACTATATCATAA dnaE 1744145 - 1740948 - | DNA polymerase III, alpha chain TERM 1734 1741153 - 1741166 + g 74 -3.1 -5.29445 | CTAATTATAATTTGT TTGGC AAAT GCTAA TTTTTGTTCTTCAAA TERM 1735 1741463 - 1741476 + g 77 -5.3 -5.00895 | opp_overlap 1741461, overlap 1741461 ATATCGTTAAATATT GTTTG GCAA CAAAC TTTTTATCTACTGGG SA1526 1745107 - 1744166 - | hypothetical protein TERM 1736 1745323 - 1745305 - R 81 -10.3 -3.12606 | CTACAGACGATGCAA GTTGGGG TGGGG CCCCAAC ACAAAGAATTTCGAA TERM 1737 1745347 - 1745329 - R 70 -6.1 -4.1891 | GGGCCCCAACACAAA GAATTTC GAAAA GAAATTC TACAAACAATGTAAG SA1527 1746717 - 1745419 - | hypothetical protein SA1528 1746922 - 1747335 + | hypothetical protein SA1529 1748329 - 1747640 - | hypothetical protein TERM 1738 1748726 - 1748748 + G 77 -5.6 -4.84529 | overlap 1748740 ACAGGTGAAATCGTT GGATATTTAG ACA CTGAAAATCC TTTTTCACTTTATCC SA1530 1748483 - 1749559 + | hypothetical protein TERM 1739 1749593 - 1749581 - T 85 -7.7 -4.82678 | GGATAAAAATGAAAA GCTTG TTA CAAGC ACATTCTCATTCAGT ald 1750993 - 1749875 - | alanine dehydrogenase TERM 1740 1750929 - 1750899 - G 70 -6.9 -3.73042 | overlap 1750897 GTTTCCACTAAAACA GTATGCCCACTTT CTACT AAAGCGTGCACAC CACTCGGTGATAAAC SA1532 1751134 - 1751634 + | hypothetical protein TERM 1741 1751697 - 1751674 - T 95 -11.8 -3.23216 | opp_overlap 1751674, overlap 1751659 1751678 CTTGATCATTATGAA CCAAGTGCAA CTTT CTGCACTTGG TTTTTTATTGTTTAT TERM 1742 1751674 - 1751697 + T 100 -11.1 -5.74288 | opp_overlap 1751659 1751674 1751678 CTTGATCATTATGAA CCAAGTGCA ACTTTC TGCACTTGG TTTTTTATTGTTTAT TERM 1743 1751861 - 1751822 - T 86 -7.4 -5.23765 | gap 2, opp_overlap 1751822 CAAACAATACAAAAA GCGTCTACCT-C-CTACA TATAAT TGTAGCGGAGATAGACGC TTAATATTTATTTAA ackA 1753082 - 1751880 - | acetate kinase TERM 1744 1752971 - 1752959 - G 72 -4.9 -4.66833 | opp_overlap 1752945 CTTCAATTGTAAAAA TTGAA TCC TTCAA TCCGATTCTTTCTAT SA1534 1754117 - 1753170 - | hypothetical protein SA1535 1754734 - 1754240 - | hypothetical protein SA1536 1755602 - 1754832 - | hypothetical protein TERM 1745 1755373 - 1755361 - G 83 -6.3 -4.98672 | GCCAAAAATACAAAA CCAAA TAA TTTGG CAACAACAAATAAGT SA1537 1756869 - 1755646 - | hypothetical protein SA1538 1758008 - 1756869 - | hypothetical protein TERM 1746 1758311 - 1758281 - R 100 -13.4 -5.72616 | opp_overlap 1758280 1758279 1758284 ATCCATATAAAAAAA GAAGCTAGACAACG TAT CGTTGGCTAACTTC AATTATTAAACTCAT SA1539 1760075 - 1758381 - | septation ring formation regulator EzrA SA1540 1760212 - 1760676 + | hypothetical protein rpsD 1760920 - 1761522 + | 30S ribosomal protein S4 TERM 1747 1761555 - 1761538 - f 100 -11.3 -4.19624 | opp_overlap 1761538 TACGTTCAATACAAA CACCCAC AATT GTGGGTG TTTTTTTTATTAATT TERM 1748 1761538 - 1761555 + F 100 -11.3 -6.15536 | opp_overlap 1761538 TACGTTCAATACAAA CACCCAC AATT GTGGGTG TTTTTTTTATTAATT TERM 1749 1761613 - 1761634 + F 82 -4.4 -5.52384 | overlap 1761616 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 1750 1763030 - 1763000 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 1761714 - 1763033 + | transposase SA1542 1764001 - 1763258 - | hypothetical protein TERM 1751 1763574 - 1763584 + g 83 -6.8 -4.87892 | TGTATAACTACTTGT GTCG CAT CGAC TTTCTTTTCTTCCAA SA1543 1764081 - 1764527 + | hypothetical protein TERM 1752 1764537 - 1764571 + F 100 -8.9 -5.51165 | gap 1, opp_overlap 1764531, overlap 1764531 AAATAAAATCGTTAC GTGATAACGTT-TATT CGAC AATATAGCGTTATCAC TTTTTTTAGGCTTTT SA1544 1764642 - 1765799 + | hypothetical protein serA 1765786 - 1767390 + | D-3-phosphoglycerate dehydrogenase TERM 1753 1767412 - 1767451 + T 100 -13.1 -5.37865 | gap 1, opp_overlap 1767412 TATGTAAATTCAAAA TGCCAAGAAGACATTGGA TTACT TCCATTG-CTTCTTGGCA TTTTTTCATTATTAA TERM 1754 1767451 - 1767412 - T 100 -13.1 -4.36595 | gap 1, opp_overlap 1767412 TATGTAAATTCAAAA TGCCAAGAAGACATTGGA TTACT TCCATTG-CTTCTTGGCA TTTTTTCATTATTAA SA1546 1768670 - 1767540 - | hypothetical protein TERM 1755 1768760 - 1768731 - R 86 -5 -5.52986 | ATTTGACTAAAAAAA GCGCAAACCCTA TTGAAG TTAGATTTGCGC TTTAGCTGTTTAAAT ptaA 1770243 - 1768777 - | PTS system, N-acetylglucosamine-specific IIABC component SA1548 1770988 - 1770371 - | hypothetical protein SA1549 1771160 - 1772434 + | hypothetical protein TERM 1756 1772508 - 1772450 - T 73 -5.8 -4.64844 | gap 3, opp_overlap 1772456 1772459, overlap 1772451 1772459 TTTACAGACAGAAAA GTACATTAAGAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTCT-AATTTA- TTTAGCTATGCAATT TERM 1757 1772508 - 1772451 - T 95 -11.8 -3.38183 | opp_overlap 1772456 1772459, overlap 1772450 1772459 TTACAGACAGAAAAG TACATTAAGAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTCT-AATTTA TTTAGCTATGCAATT TERM 1758 1772456 - 1772504 + T 100 -14.2 -4.48299 | gap 1, opp_overlap 1772450 1772451 1772459, overlap 1772459 GACAGAAAAGTACAT TAAGAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTCTAA TTTATTTAGCTATGC TERM 1759 1772501 - 1772459 - T 100 -15.9 -3.38134 | gap 1, opp_overlap 1772456 1772459, overlap 1772450 1772451 AGAAAAGTACATTAA GAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTC TAATTTATTTAGCTA TERM 1760 1772459 - 1772501 + T 100 -15.9 -3.19523 | gap 1, opp_overlap 1772459 1772450 1772451, overlap 1772456 AGAAAAGTACATTAA GAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTC TAATTTATTTAGCTA tyrS 1773790 - 1772528 - | tyrosyl-tRNA synthetase TERM 1761 1773889 - 1773867 - H 100 -7.8 -5.86332 | TGAACGTAAAAAAAA CCCTTACA ACAAATA TGTAAGGG CGCGATTGCACGTTA sgtA 1774172 - 1775077 + | transglycosylase TERM 1762 1775126 - 1775173 + T 82 -5.1 -5.35815 | gap 1, opp_overlap 1775129, overlap 1775129 GCATCCAAATATTAA AAACAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTGTTC TTTTTATTTACTCTA TERM 1763 1775170 - 1775129 - T 93 -9 -4.93696 | gap 1, opp_overlap 1775129 1775126 TCCAAATATTAAAAA CAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTG TTCTTTTTATTTACT TERM 1764 1775129 - 1775170 + T 80 -6.8 -4.74052 | gap 1, opp_overlap 1775129, overlap 1775126 TCCAAATATTAAAAA CAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTG TTCTTTTTATTTACT SA1552 1777955 - 1775280 - | hypothetical protein TERM 1765 1776491 - 1776518 + g 70 -3.6 -4.93318 | gap 1, overlap 1776485 1776491 1776493 CTTGTCTTTCTAACG TT-TTAGCTTTGT GAT ACGGAGCTAATAA TTTTTGTAAATTGTA TERM 1766 1778240 - 1778205 - R 84 -7 -5.23316 | gap 1, overlap 1778182 TAGCACAGCAAAAAA CCGAACTGCT-GAAATA ATG CATCTCCAACAGTCCGG TCTATTAAACTATTT fhs 1779955 - 1778288 - | formate--tetrahydrofolate ligase TERM 1767 1779226 - 1779238 + g 78 -7.7 -4.2349 | opp_overlap 1779220, overlap 1779221 TTAAAATCATTGCAA GTGCA CCT TGCAC TTTTAAATCTGCAAC acsA 1782101 - 1780395 - | acetyl-CoA synthetase acuA 1782270 - 1782902 + | hypothetical protein acuC 1782927 - 1784096 + | acetoin utilization protein TERM 1768 1784132 - 1784183 + T 70 -5.2 -4.53707 | gap 1, opp_overlap 1784135, overlap 1784133 1784135 TTTAAAAGATAAATA AAAGGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCCTAA TTTTGTGAATTTATT TERM 1769 1784133 - 1784182 + T 74 -8.7 -3.30597 | gap 1, opp_overlap 1784135, overlap 1784132 1784135 TTAAAAGATAAATAA AAGGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCCTA ATTTTGTGAATTTAT TERM 1770 1784135 - 1784180 + T 91 -11.3 -3.20462 | gap 1, opp_overlap 1784135, overlap 1784133 1784132 AAAAGATAAATAAAA GGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCC TAATTTTGTGAATTT TERM 1771 1784180 - 1784135 - T 100 -13.5 -5.15682 | gap 1, opp_overlap 1784135 1784133 1784132 AAAAGATAAATAAAA GGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCC TAATTTTGTGAATTT ccpA 1785138 - 1784194 - | catabolite control protein A TERM 1772 1784474 - 1784484 + g 71 -6.8 -4.19735 | CATAAAATGGCATCT GGCA AAT TGCC TTTCATTTTAGCAAA TERM 1773 1785600 - 1785642 + r 71 -8.6 -2.81291 | opp_overlap 1785600 1785603 1785605, overlap 1785599 1785603 TTTCTATACAAAAAA TAATAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTGTAA GTTTAAAATTGTCGA TERM 1774 1785642 - 1785600 - R 100 -10.8 -5.36441 | opp_overlap 1785600 1785599 1785603, overlap 1785603 1785605 TTTCTATACAAAAAA TAATAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTGTAA GTTTAAAATTGTCGA TERM 1775 1785603 - 1785639 + r 78 -10.3 -2.66593 | opp_overlap 1785600 1785603 1785605, overlap 1785600 1785599 CTATACAAAAAATAA TAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTG TAAGTTTAAAATTGT TERM 1776 1785639 - 1785603 - R 100 -12.5 -4.77122 | opp_overlap 1785603 1785600 1785599, overlap 1785600 1785605 CTATACAAAAAATAA TAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTG TAAGTTTAAAATTGT TERM 1777 1785637 - 1785605 - R 100 -15.1 -3.97741 | opp_overlap 1785603 1785600 1785599, overlap 1785603 1785600 ATACAAAAAATAATA GCCACTCTAAAAGTA ATA TACTCTTAGAATGGC TGTAAGTTTAAAATT SA1558 1786814 - 1785723 - | bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase TERM 1778 1786772 - 1786786 + g 77 -8.6 -3.65671 | AAATTTGATGATTCA GTGAGA CAA TCTCAC TTCTGTATGATTCTA TERM 1779 1787270 - 1787286 + r 71 -4.5 -4.74706 | CTAAGATTCATTGTT TATTTGA TTA TCGAATA TTTTTCCATCTTCAG TERM 1780 1787428 - 1787407 - R 86 -7.3 -5.23316 | opp_overlap 1787402 1787407 GATGATATCAAAAAA GGTAAGCAC CTGA ATGCCTACC TTTTATTTTGAAATT TERM 1781 1787407 - 1787428 + r 72 -4.4 -5.10163 | opp_overlap 1787407, overlap 1787402 GATGATATCAAAAAA GGTAAGCA CCTGAA TGCCTACC TTTTATTTTGAAATT SA1559 1788866 - 1787508 - | hypothetical protein TERM 1782 1788885 - 1788927 + r 100 -13.8 -4.11412 | opp_overlap 1788885 1788889, overlap 1788889 TATATCCTCCTATAA CAAATGCACTTAAATAAG TAACAAC CTCATTTAAGTGCATTTG TTTAATTATTAATTA TERM 1783 1788927 - 1788885 - R 100 -16 -3.29829 | opp_overlap 1788885 1788889, overlap 1788889 TATATCCTCCTATAA CAAATGCACTTAAATAAG TAACAAC CTCATTTAAGTGCATTTG TTTAATTATTAATTA TERM 1784 1788889 - 1788923 + r 89 -8.8 -4.62392 | opp_overlap 1788885 1788889, overlap 1788885 TCCTCCTATAACAAA TGCACTTAAATAAG TAACAAC CTCATTTAAGTGCA TTTGTTTAATTATTA TERM 1785 1788923 - 1788889 - R 100 -11 -4.30719 | opp_overlap 1788889 1788885, overlap 1788885 TCCTCCTATAACAAA TGCACTTAAATAAG TAACAAC CTCATTTAAGTGCA TTTGTTTAATTATTA SA1560 1789431 - 1788940 - | hypothetical protein murC 1790818 - 1789505 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1786 1790650 - 1790670 + g 73 -4.1 -4.88388 | TATCTTCTTTTATGT TATTAGCAT CAA ATGGTAATA TTTTTATCCCCTTAT SA1562 1794666 - 1790842 - | hypothetical protein TERM 1787 1794368 - 1794378 + g 70 -4.6 -4.82901 | GTTTGATTTCTTCTA CGGC GAT GTCG TTTTTGTGAACGAGA SA1563 1795283 - 1794687 - | hypothetical protein SA1564 1796169 - 1795312 - | hypothetical protein TERM 1788 1796261 - 1796228 - R 93 -11.2 -3.38297 | opp_overlap 1796230 1796232, overlap 1796230 1796239 ATCAACACATAGTAA CAGAGAAAAACGAG TATTAC CCCGTTTTTCTCTA GTCTAAATTACACAT TERM 1789 1796230 - 1796259 + r 73 -9.4 -2.66733 | opp_overlap 1796228 1796230 1796239, overlap 1796232 CAACACATAGTAACA GAGAAAAACGAG TATTAC CCCGTTTTTCTC TAGTCTAAATTACAC TERM 1790 1796259 - 1796230 - R 93 -11.6 -3.25307 | opp_overlap 1796230 1796232, overlap 1796228 1796239 CAACACATAGTAACA GAGAAAAACGAG TATTAC CCCGTTTTTCTC TAGTCTAAATTACAC SA1565 1796580 - 1796269 - | hypothetical protein SA1566 1797721 - 1796645 - | hypothetical protein SA1567 1797808 - 1798119 + | hypothetical protein TERM 1791 1798201 - 1798164 - T 100 -10.1 -4.87318 | gap 1, opp_overlap 1798164 CGTAAAACTTAAAAA TGAGCCACACCCTAAT TAGTAAG ATT-GGATGTGGCTCA TTTTTTTATTTTTGA TERM 1792 1798164 - 1798201 + T 100 -8.6 -6.20267 | gap 1, opp_overlap 1798164 CGTAAAACTTAAAAA TGAGCCACACCCTAATT AGTAA GATT-GGATGTGGCTCA TTTTTTTATTTTTGA SA1568 1799086 - 1798244 - | hypothetical protein TERM 1793 1799472 - 1799431 - R 85 -5.9 -5.46698 | opp_overlap 1799431 TTCAAAATCAAAAAA TCGGACAGATGAAAAGTAA AATA CTTTTTTCCATCAGTCCGA TTTATTATAGAACCT TERM 1794 1799514 - 1799559 + r 100 -10.7 -4.87665 | opp_overlap 1799519, overlap 1799519 ACCATTATAGTACGA AAAAACACTTATGATTGTATG TGTA CATACCCTCATAAGTGTTTTA TTTTTGTGAATGGAA TERM 1795 1799554 - 1799519 - R 100 -10.6 -5.20216 | opp_overlap 1799514 1799519 TATAGTACGAAAAAA CACTTATGATTGTATG TGTA CATACCCTCATAAGTG TTTTATTTTTGTGAA TERM 1796 1799519 - 1799554 + r 100 -10.6 -5.35224 | opp_overlap 1799519, overlap 1799514 TATAGTACGAAAAAA CACTTATGATTGTATG TGTA CATACCCTCATAAGTG TTTTATTTTTGTGAA SA1569 1800201 - 1799557 - | hypothetical protein TERM 1797 1799813 - 1799803 - G 74 -5.4 -4.69622 | overlap 1799794 ATACAACGCTAAAAA CGTA TGA TACG TTAAACGTCGTTTTG SA1570 1801007 - 1800216 - | hypothetical protein TERM 1798 1801036 - 1801065 + r 78 -9.4 -3.25809 | opp_overlap 1801036, overlap 1801034 1801028 CTTTCAATTAGAAAA TGGCTCTAGAAA TAGGTT TTTCAAGAGCCA TATATTCTAATTTAT TERM 1799 1801065 - 1801036 - R 100 -9.4 -4.5442 | opp_overlap 1801034 1801028 1801036 CTTTCAATTAGAAAA TGGCTCTAGAAA TAGGTT TTTCAAGAGCCA TATATTCTAATTTAT SA1571 1802405 - 1801557 - | D-alanine aminotransferase SA1572 1803818 - 1802409 - | dipeptidase PepV TERM 1800 1804313 - 1804356 + r 100 -10.7 -4.10164 | gap 1, opp_overlap 1804313 1804314 1804320 1804323, overlap 1804314 1804316 1804320 1804323 ATTAGCTATGACTAA CGATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATCA TTTCTGTCCTACTCA TERM 1801 1804356 - 1804313 - R 100 -12.9 -3.22476 | gap 1, opp_overlap 1804313 1804314 1804316 1804320 1804323, overlap 1804314 1804320 1804323 ATTAGCTATGACTAA CGATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATCA TTTCTGTCCTACTCA TERM 1802 1804314 - 1804355 + r 100 -14.2 -3.05616 | gap 1, opp_overlap 1804314 1804313 1804320 1804323, overlap 1804313 1804316 1804320 1804323 TTAGCTATGACTAAC GATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATC ATTTCTGTCCTACTC TERM 1803 1804355 - 1804314 - R 100 -14.2 -2.53164 | gap 1, opp_overlap 1804313 1804314 1804316 1804320 1804323, overlap 1804313 1804320 1804323 TTAGCTATGACTAAC GATAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTATC ATTTCTGTCCTACTC TERM 1804 1804316 - 1804353 + r 85 -11 -3.07876 | gap 1, opp_overlap 1804314 1804313 1804320 1804323, overlap 1804314 1804313 1804320 1804323 AGCTATGACTAACGA TAAAGAACCACTAT-AT AATAA ATCATAGTGGTTCTTTA TCATTTCTGTCCTAC TERM 1805 1804349 - 1804320 - R 75 -7.4 -4.08546 | gap 1, opp_overlap 1804316 1804314 1804313 1804320 1804323, overlap 1804314 1804313 1804323 ATGACTAACGATAAA GAACCACTAT-AT AATAA ATCATAGTGGTTC TTTATCATTTCTGTC TERM 1806 1804320 - 1804349 + r 75 -7.4 -4.19307 | gap 1, opp_overlap 1804320 1804314 1804313 1804323, overlap 1804316 1804314 1804313 1804323 ATGACTAACGATAAA GAACCACTAT-AT AATAA ATCATAGTGGTTC TTTATCATTTCTGTC SA1573 1804798 - 1804376 - | hypothetical protein SA1574 1805510 - 1804815 - | hypothetical protein SA1575 1807168 - 1805507 - | hypothetical protein SA1576 1807575 - 1808843 + | hypothetical protein TERM 1807 1808902 - 1808950 + T 82 -8.7 -4.02535 | gap 3, opp_overlap 1808902 TCATTCAATTAAAAA TGACCTTAATATAACTGAGTCACT AAAA AGTG--TC-GTTATATTAAGGTCA TTTCGTTAATTATGA TERM 1808 1808950 - 1808902 - T 93 -8.7 -4.88407 | gap 3, opp_overlap 1808902 TCATTCAATTAAAAA TGACCTTAATATAACTGAGTCACT AAAA AGTG--TC-GTTATATTAAGGTCA TTTCGTTAATTATGA SA1577 1815520 - 1808960 - | hypothetical protein TERM 1809 1812720 - 1812748 + g 73 -7.3 -3.98826 | overlap 1812725 1812738 GCGTTTAAAATGTTT GTGTTTGCTGCAG TTA CAGCAGCATTCAC TTTGTCAATTGCTGC TERM 1810 1812725 - 1812743 + g 75 -8.8 -3.34113 | overlap 1812720 1812738 TAAAATGTTTGTGTT TGCTGCAG TTA CAGCAGCA TTCACTTTGTCAATT TERM 1811 1815805 - 1815778 - R 100 -10.7 -5.22312 | opp_overlap 1815778 1815780 ATTCATACCAAAAAA CACCAAGCAAC CGAAAC GTTACTTGGTG TCATTACAAATGTAA SA1578 1816157 - 1815846 - | hypothetical protein TERM 1812 1816115 - 1816125 + g 76 -4 -5.31059 | GAACTGGTTTAGATT CAAA AAG TTTG TTTTTTAATTCATCT leuS 1818593 - 1816179 - | leucyl-tRNA synthetase TERM 1813 1818518 - 1818532 + g 73 -3.6 -5.13722 | overlap 1818527 TTTGACCTAAGTTAT CATTTG TTT TAAATG TTTTATTTTCGTCCC SA1580 1820065 - 1818884 - | hypothetical protein SA1581 1820175 - 1821128 + | hypothetical protein SA1582 1821125 - 1821688 + | hypothetical protein TERM 1814 1821801 - 1821759 - T 91 -11 -3.83758 | gap 1, opp_overlap 1821768, overlap 1821768 AATTAATACCAACAA CAACAAAAAGAGGTTTTCA ACTTAA TGAAAACCTCTTTTTAT-G CTATTAAACTTACAC TERM 1815 1821768 - 1821793 + T 100 -10.6 -4.98436 | opp_overlap 1821759 1821768 CAACAACAACAAAAA GAGGTTTTCA ACTTAA TGAAAACCTC TTTTTATGCTATTAA TERM 1816 1821793 - 1821768 - T 100 -10.6 -5.3798 | opp_overlap 1821768, overlap 1821759 CAACAACAACAAAAA GAGGTTTTCA ACTTAA TGAAAACCTC TTTTTATGCTATTAA rot 1822272 - 1821811 - | repressor of toxins Rot TERM 1817 1822771 - 1822750 - R 89 -3.8 -6.11019 | gap 1, opp_overlap 1822750 AAAAAGTAAAAAAAA GATGAG-CA TCTAC TGTCTCATC TTTTTAGAATATTAA SA1584 1823610 - 1822783 - | hypothetical protein TERM 1818 1823935 - 1823913 - g 82 -4.1 -5.54894 | gap 1, overlap 1823914 AACGCAGCAAAAAAA GTGG-GCCCA CGTT TGGGCGCCAA TAAAGTCGTTGCCGG TERM 1819 1823934 - 1823914 - g 76 -7.6 -3.9131 | gap 1, overlap 1823913 ACGCAGCAAAAAAAG TGG-GCCCA CGTT TGGGCGCCA ATAAAGTCGTTGCCG TERM 1820 1824776 - 1824806 + G 70 -8.4 -3.29324 | opp_overlap 1824782, overlap 1824787 CTTAAAACGTGTTGG CATAATTGCAGCTT TAG GAGCTACAGTTATG TTAGGTTTAAGTACA SA1585 1823844 - 1824845 + | hypothetical protein TERM 1821 1824863 - 1824908 + T 95 -12.1 -3.67498 | opp_overlap 1824865, overlap 1824865 CATGGCATAAACAAT AATTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAATG TTATATTGGCAGTTC TERM 1822 1824865 - 1824906 + T 100 -14.7 -3.41292 | opp_overlap 1824865, overlap 1824863 TGGCATAAACAATAA TTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAA TGTTATATTGGCAGT TERM 1823 1824906 - 1824865 - T 95 -10.3 -4.15703 | opp_overlap 1824865 1824863 TGGCATAAACAATAA TTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAA TGTTATATTGGCAGT ribH 1825431 - 1824967 - | 6,7-dimethyl-8-ribityllumazine synthase ribA 1826625 - 1825444 - | riboflavin biosynthesis protein ribB 1827268 - 1826636 - | riboflavin synthase subunit alpha ribD 1828318 - 1827275 - | riboflavin specific deaminase TERM 1824 1828370 - 1828342 - R 81 -4.6 -5.38054 | CTCTATAAACAAAAA TCCTCACATCAT GAATT AAGATGCAAGGA GAAAAATTTATCGTT SA1590 1830301 - 1828799 - | hypothetical protein TERM 1825 1830645 - 1830609 - H 83 -10.3 -3.44891 | opp_overlap 1830609, overlap 1830605 1830600 1830601 AATAAATTCAACTAA GGTGATTGGCCATAC ACTCAAG ATATGGCTAATCACC TTTTTCAATGCAAAA TERM 1826 1830609 - 1830645 + H 100 -11.8 -4.65895 | opp_overlap 1830609 1830605 1830600 1830601 AATAAATTCAACTAA GGTGATTGGCCATA CACTCAAGA TATGGCTAATCACC TTTTTCAATGCAAAA SA1591 1830824 - 1831138 + | hypothetical protein TERM 1827 1831793 - 1831779 - g 74 -6.4 -4.37544 | opp_overlap 1831778 TGATAATAATATAAA GCATCC TAA AGATGC CATTAATGATTTAAA SA1592 1831138 - 1832430 + | hypothetical protein TERM 1828 1832441 - 1832472 + T 100 -12.5 -4.98255 | opp_overlap 1832441, overlap 1832435 TTTAAGAAATAAAAA GACGCTTTCTATT TATTGC GATAGAAAGCGTC TTTTTATACTTGAGC TERM 1829 1832472 - 1832441 - T 100 -11.8 -5.47159 | opp_overlap 1832435 1832441 TTTAAGAAATAAAAA GACGCTTTCTAT TTATTGCG ATAGAAAGCGTC TTTTTATACTTGAGC SA1593 1833371 - 1832517 - | hypothetical protein TERM 1830 1833641 - 1833627 - R 70 -3.6 -5.1675 | opp_overlap 1833627 TCACGTATTAAAAAA CAAAAA ATT CTTTTG TTCGTTTACTTAGTT SA1594 1833871 - 1833647 - | hypothetical protein SA1595 1834070 - 1834540 + | hypothetical protein TERM 1831 1834939 - 1834908 - g 81 -7.4 -4.45168 | opp_overlap 1834909, overlap 1834909 CCGTTAAAACATAAA CGTGCACCGATACA AATT TATATCAATGCACA TTATATTGTTGGTAT TERM 1832 1834938 - 1834909 - g 73 -8.7 -3.26378 | opp_overlap 1834909, overlap 1834908 CGTTAAAACATAAAC GTGCACCGATACA AATT TATATCAATGCAC ATTATATTGTTGGTA SA1596 1834653 - 1835096 + | hypothetical protein SA1597 1835526 - 1835083 - | hypothetical protein SA1598 1835822 - 1836457 + | hypothetical protein TERM 1833 1836878 - 1836852 - T 100 -13.8 -4.68994 | opp_overlap 1836852 ACTATGATGGAAAAA CCCCCATAAGCA CAA TGCCTATGAGGG TTTAAATATGTTTAT TERM 1834 1836852 - 1836878 + T 84 -9.4 -3.79565 | opp_overlap 1836852 ACTATGATGGAAAAA CCCCCATAAGCA CAA TGCCTATGAGGG TTTAAATATGTTTAT SA1599 1837610 - 1836897 - | putative translaldolase TERM 1835 1837660 - 1837690 + H 74 -2.1 -5.56573 | gap 1, opp_overlap 1837675, overlap 1837664 1837675 1837681 AACAACATCTGCATG TCTTTTTCTTACAA CCAT TTGTAA-AAAATGA TTTTTATTTCTTTGT TERM 1836 1837904 - 1837923 + G 70 -2.2 -5.33405 | ACTTTTACTTATCTA GCTTAA TGATTATT TTAAGC TTTTTCTTTAATACA SA1600 1837870 - 1838172 + | hypothetical protein TERM 1837 1838339 - 1838388 + F 76 -5.1 -5.15969 | gap 1, opp_overlap 1838339 1838355, overlap 1838356 GATATAACATATAAT GAGGTT-TGATAATGCATCGACAA TTT TTGTCGTCGTGTTGCCAAAACCTC TTTTTTAAATTCAAA SA1601 1838350 - 1838793 + | hypothetical protein SA1602 1838790 - 1839143 + | hypothetical protein TERM 1838 1839342 - 1839397 + T 82 -8.7 -3.91032 | gap 1, opp_overlap 1839349, overlap 1839349 GGGACATAAATCCCT AAAAAAACAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTGTTCTCTA TTTATACAATACTTC TERM 1839 1839349 - 1839390 + T 100 -15.6 -3.80279 | gap 1, opp_overlap 1839349, overlap 1839342 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1840 1839390 - 1839349 - T 100 -15.6 -5.4477 | gap 1, opp_overlap 1839349 1839342 AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA TERM 1841 1841002 - 1840983 - T 73 -5.8 -4.56314 | gap 1, opp_overlap 1840986, overlap 1840985 1840986 1840988 TTAATATAAGGAAAA TAGCAGCTC AAC GAGCTG-TA CATTATAAAATACAT TERM 1842 1841000 - 1840986 - T 77 -10 -2.91057 | opp_overlap 1840986, overlap 1840985 1840983 1840988 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1843 1840986 - 1841000 + T 76 -10 -2.60079 | opp_overlap 1840986 1840985 1840983 1840988 ATATAAGGAAAATAG CAGCTC AAC GAGCTG TACATTATAAAATAC TERM 1844 1841027 - 1841060 + T 83 -6.9 -5.16572 | opp_overlap 1841027, overlap 1841029 ATACATATCAAAAAA GCTGATTTCTATCAA ATAA TTAATAGAAATCAAC TTTTTTACATTGCCT TERM 1845 1841060 - 1841027 - T 100 -11.3 -5.25893 | opp_overlap 1841027 1841029 ATACATATCAAAAAA GCTGATTTCTATCAA ATAA TTAATAGAAATCAAC TTTTTTACATTGCCT SA1606 1841973 - 1841140 - | hypothetical protein TERM 1846 1842177 - 1842145 - R 85 -5.6 -5.42514 | TGACAAACTAAAAAA GCCGAAGTCACAAC ATATA GTCATCACTTCAGC CTAACATTTAATTGA SA1607 1843096 - 1842185 - | hypothetical protein TERM 1847 1843188 - 1843151 - R 74 -7.3 -3.99216 | opp_overlap 1843151, overlap 1843140 AATAGAAAAGCTAAA GATTTTCGATACATA TTATCATT TATATACCGAAAATC TTTTATTTAGCTATA metK 1844411 - 1843215 - | S-adenosylmethionine synthetase TERM 1848 1843805 - 1843838 + g 72 -9.1 -2.65876 | gap 1, opp_overlap 1843824, overlap 1843791 1843802 TCACATCATCAGCAT GT-TGTGTTGATACGA CAA TCGTATCAATACGTAC TGGGTTATCATTTTC TERM 1849 1844501 - 1844470 - H 90 -6.6 -5.65927 | GAGCTAAATAAAAAA GACCTTCTAACTAT TAAT ATAGAGAGAAGGCC TAATACGTCCATTCG TERM 1850 1844758 - 1844735 - H 72 -8.4 -3.26319 | opp_overlap 1844735 1844734 1844740, overlap 1844740 AATGTGTTATACTAA TTAAATGTAA AGGC TTACATTTAA ATTATCGCTTTGGAG pckA 1844783 - 1846375 + | phosphoenolpyruvate carboxykinase TERM 1851 1846390 - 1846436 + F 100 -10.6 -4.57353 | gap 2, opp_overlap 1846394, overlap 1846391 1846393 1846394 1846396 AATTTGAATACTAAT TAA-AG-AGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTCCTCTTA TTTTATGTGCTAAAA TERM 1852 1846391 - 1846433 + F 100 -12.9 -4.39748 | opp_overlap 1846394, overlap 1846390 1846393 1846394 1846396 ATTTGAATACTAATT AAAGAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTCCTC TTATTTTATGTGCTA TERM 1853 1846393 - 1846431 + F 100 -15.5 -3.78861 | opp_overlap 1846394, overlap 1846391 1846390 1846394 1846396 TTGAATACTAATTAA AGAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTCC TCTTATTTTATGTGC TERM 1854 1846430 - 1846394 - f 100 -16.8 -4.00469 | opp_overlap 1846393 1846391 1846390 1846394 1846396 TGAATACTAATTAAA GAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTC CTCTTATTTTATGTG TERM 1855 1846394 - 1846430 + F 100 -19 -2.86232 | opp_overlap 1846394, overlap 1846393 1846391 1846390 1846396 TGAATACTAATTAAA GAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTC CTCTTATTTTATGTG TERM 1856 1846396 - 1846428 + F 100 -15.8 -2.95962 | opp_overlap 1846394, overlap 1846394 1846393 1846391 1846390 AATACTAATTAAAGA GCCAACCGTTGTTA TAGTC TAACAATGGTTGGC TCCTCTTATTTTATG SA1610 1846499 - 1846675 + | hypothetical protein SA1611 1847523 - 1846753 - | hypothetical protein SA1612 1847983 - 1847504 - | hypothetical protein SA1613 1848043 - 1848300 + | hypothetical protein menC 1849298 - 1848297 - | o-succinylbenzoic acid synthetase TERM 1857 1848356 - 1848331 - G 73 -7.5 -3.78022 | opp_overlap 1848331 GTTATATCCACTAAA GGGGGGCGA AATTCGAG TCGCCCCTC TTTTAATATGCCTGA TERM 1858 1848331 - 1848356 + g 100 -9.7 -4.3586 | opp_overlap 1848331 GTTATATCCACTAAA GGGGGGCGA AATTCGAG TCGCCCCTC TTTTAATATGCCTGA menE 1850781 - 1849303 - | O-succinylbenzoic acid-CoA ligase SA1616 1851422 - 1850940 - | hypothetical protein SA1617 1851734 - 1852348 + | hypothetical protein SA1618 1852429 - 1853424 + | hypothetical protein TERM 1859 1853429 - 1853451 + F 76 -6.2 -4.66163 | opp_overlap 1853428, overlap 1853432 CAACAGAATAAATTT TCAGGGTAGC TCA GCTACCCTTC TTTTTCGGTAAAAAT TERM 1860 1853432 - 1853448 + F 100 -12.3 -4.44608 | opp_overlap 1853428, overlap 1853429 CAGAATAAATTTTCA GGGTAGC TCA GCTACCC TTCTTTTTCGGTAAA TERM 1861 1854093 - 1854081 - g 82 -4.1 -5.44198 | AATAAAGAAGAAAAA CATGA TAA CCATG CAAAAAATTCAGCAG SA1619 1853499 - 1854125 + | hypothetical protein SA1620 1854166 - 1854507 + | hypothetical protein SA1621 1854608 - 1855180 + | hypothetical protein TERM 1862 1855319 - 1855261 - T 85 -8.4 -4.4195 | opp_overlap 1855263, overlap 1855249 1855263 ATATATTTTATAAAA TAGACCACGCATACCTATCTATAAAC GGACAAT GTTTATAAATGAGTTTGCATGGTCTT GAATTGTATTAAATT TERM 1863 1855317 - 1855263 - T 91 -11 -3.81279 | opp_overlap 1855263, overlap 1855261 ATATTTTATAAAATA GACCACGCATACCTATCTATAAAC GGACAAT GTTTATAAATGAGTTTGCATGGTC TTGAATTGTATTAAA TERM 1864 1856573 - 1856589 + T 73 -8.7 -3.06636 | opp_overlap 1856562, overlap 1856572 1856576 CATAGCACCAGTCAT CAGTGGC TGT GCCATTG CGTTTTTTTCTTATT TERM 1865 1856657 - 1856685 + T 100 -13.3 -3.32993 | opp_overlap 1856657 CCGCACCAATAAAAA TCCCCTCACTA CCGCAAA TAGTGAGGGGA TTGGTGTATAAGTAA TERM 1866 1856685 - 1856657 - T 100 -14.7 -5.1356 | opp_overlap 1856657 CCGCACCAATAAAAA TCCCCTCACTACC GCA AATAGTGAGGGGA TTGGTGTATAAGTAA TERM 1867 1856827 - 1856859 + T 100 -9.3 -5.18355 | opp_overlap 1856835 1856840 GATGAGTTCAATATC GGAAGTTAGGCAA CTAAACA TTGCTTAGCTTCC TTTTTACTTTTTGGA tnp 1857478 - 1856978 - | hypothetical protein TERM 1868 1857305 - 1857317 + g 73 -7.7 -3.83324 | ATTTCTCTTTTTGGT TGGCT CAA AGCCA TTTAAATATTTATCA SA1625 1859159 - 1857930 - | specificity determinant HsdS SA1626 1860708 - 1859152 - | hypothetical protein TERM 1869 1859478 - 1859496 + g 84 -6.7 -5.1101 | CGATAAATAGTACGT TGTCGTC TTGTT GGCGACA TTTTTTAAATACTAA TERM 1870 1860940 - 1860982 + r 74 -7.9 -3.7948 | opp_overlap 1860941, overlap 1860941 TCATACATAAATAAA ACCAATCAACAATTGAGTT GGTGA AAATCAATCGTTGATTGGC TTTGATGCATATTAA TERM 1871 1860941 - 1860981 + r 85 -11.4 -2.87206 | opp_overlap 1860941, overlap 1860940 CATACATAAATAAAA CCAATCAACAATTGAGTT GGTGA AAATCAATCGTTGATTGG CTTTGATGCATATTA TERM 1872 1860981 - 1860941 - R 100 -13.6 -5.07523 | opp_overlap 1860941 1860940 CATACATAAATAAAA CCAATCAACAATTGAGTT GGTGA AAATCAATCGTTGATTGG CTTTGATGCATATTA splF 1861788 - 1861069 - | serine protease SplF splD 1862665 - 1861946 - | serine protease SplD splC 1863505 - 1862786 - | serine protease SplC splB 1864285 - 1863563 - | serine protease SplB splA 1865117 - 1864410 - | serine protease SplA TERM 1873 1865215 - 1865197 - R 72 -6.2 -4.27026 | TTTTAAATAAAAATA TTAATTAA ATA TTAATTAA CCACTTATTAACATT SA1632 1865771 - 1865553 - | hypothetical protein TERM 1874 1865715 - 1865732 + g 87 -6.3 -5.58179 | TGGATTAGTTTCACT GACATGT TGAT GCATGTC TTTTTTGTTCTGATA TERM 1875 1866228 - 1866216 - g 82 -3.4 -5.59534 | opp_overlap 1866216 AAGCAGAAGAAAAAA TGAC AAATG GTCA ATTGTGGAAAAAAGT SA1633 1866080 - 1866661 + | beta-lactamase TERM 1876 1866850 - 1866879 + T 77 -5.7 -4.85433 | overlap 1866853 CAGCGTTTGGCTTGC TTTGACGACATGT TCGC GCATGTCGTCTTA TTTTTACATTTATAT TERM 1877 1866853 - 1866876 + T 100 -11.8 -4.50298 | overlap 1866850 CGTTTGGCTTGCTTT GACGACATGT TCGC GCATGTCGTC TTATTTTTACATTTA TERM 1878 1867041 - 1867065 + T 71 -7.3 -3.71649 | opp_overlap 1867047, overlap 1867039 1867042 AATACCCCTGCTGTC CGAATACAAAA TTA TTTTGTATTCA TATTTATCTGTTCTC TERM 1879 1867042 - 1867064 + T 82 -10.8 -2.81905 | opp_overlap 1867047, overlap 1867041 1867039 ATACCCCTGCTGTCC GAATACAAAA TTA TTTTGTATTC ATATTTATCTGTTCT truncated-SA 1867412 - 1867134 - | hypothetical protein SA1635 1867608 - 1868081 + | hypothetical protein SA1636 1868086 - 1868877 + | hypothetical protein TERM 1880 1869044 - 1869017 - T 82 -7.7 -4.45083 | opp_overlap 1869017 1869018, overlap 1869018 GCTATATCTACAAAA CGAACCACGCC GATTAA GACGTGGTTCC ATTTTTTTAATAATT TERM 1881 1869018 - 1869043 + T 72 -9 -2.94304 | opp_overlap 1869018 1869017, overlap 1869017 CTATATCTACAAAAC GAACCACGCC GATTAA GACGTGGTTC CATTTTTTTAATAAT TERM 1882 1869043 - 1869018 - T 93 -11.2 -3.26568 | opp_overlap 1869017 1869018, overlap 1869017 CTATATCTACAAAAC GAACCACGCC GATTAA GACGTGGTTC CATTTTTTTAATAAT lukD 1870230 - 1869247 - | leukotoxin, LukD lukE 1871167 - 1870232 - | leukotoxin LukE TERM 1883 1871822 - 1871843 + H 82 -6.1 -5.2853 | opp_overlap 1871838, overlap 1871838 GCATGGTCGTTGACT TATTTATAT TATA ATATAAATA TTTTATTTTTCAATA SA1639 1872531 - 1873319 + | hypothetical protein SA1640 1874153 - 1874647 + | hypothetical protein TERM 1884 1874667 - 1874683 + F 82 -8 -4.48073 | AAACTAAATAATTTC GGGTAG CCCCC CTACCC TTATTATTTTTTTGC SA1641 1874982 - 1875758 + | hypothetical protein TERM 1885 1875844 - 1875804 - T 75 -9.2 -3.01269 | opp_overlap 1875805, overlap 1875799 1875820 AATTTCCAAACCATA TCGTGCAAATAGAAAAGC AGATA ACTTTTTTATTTGCACGT TTTATTTTAGAACAA TERM 1886 1875805 - 1875843 + T 100 -14.2 -5.07652 | opp_overlap 1875804 1875799 1875820 ATTTCCAAACCATAT CGTGCAAATAGAAAAG CAGATAA CTTTTTTATTTGCACG TTTTATTTTAGAACA seg 1877086 - 1876310 - | extracellular enterotoxin type G precursor sen 1878145 - 1877369 - | enterotoxin SeN yent2 1878573 - 1878163 - | enterotoxin YENT2 yent1 1878934 - 1878533 - | enterotoxin Yent1 sei 1879816 - 1879088 - | extracellular enterotoxin type I precursor sem 1880570 - 1879851 - | enterotoxin SEM TERM 1887 1879995 - 1879983 - G 80 -6.3 -4.80959 | overlap 1879993 TAAGTCATAAGAAAA TGATG AAC CATCA TTCAAATGAAATAAT seo 1881633 - 1880851 - | enterotoxin SeO TERM 1888 1881852 - 1881799 - R 82 -5.4 -5.48787 | overlap 1881808 ATAATAGACAAAAAA CCTTAAAAATAGCGCTTAAAATGG GTAAAA CCATTTTAAGCGCTATAACGGAGA GTGAGGGATTCGAAC TERM 1889 1881843 - 1881808 - R 100 -17.9 -4.77925 | overlap 1881799 AAAAAACCTTAAAAA TAGCGCTTAAAATGG GTAAAA CCATTTTAAGCGCTA TAACGGAGAGTGAGG TERM 1890 1881983 - 1881962 - R 100 -9.5 -5.8187 | opp_overlap 1881962 TATGTAATAAAAAAA CAGAAGCGA TATT TCACTTCTG TTTGTATGACTCCTA TERM 1891 1881962 - 1881983 + r 75 -7.3 -4.07124 | opp_overlap 1881962 TATGTAATAAAAAAA CAGAAGCGA TATT TCACTTCTG TTTGTATGACTCCTA TERM 1892 1882069 - 1882056 - R 70 -8.1 -3.14881 | TAACCGCTTGACCAA GGAGC CATG GCTCC ACAGGTAGGACTCGA TERM 1893 1882185 - 1882205 + r 70 -6.1 -4.19506 | opp_overlap 1882185 1882187 GAATCGAACCCACAA CATCAGCTT GGA AGGCTGAGG TTTTGCCATTAAACT TERM 1894 1882898 - 1882864 - R 100 -10.2 -4.7078 | TGAACTATTGAAAAA GATGTAGGAATCATAA ATT TTATAATGCCTACACC TCTAAACTATTAAAA SA1649 1883547 - 1882993 - | hypothetical protein TERM 1895 1883625 - 1883678 + r 73 -8.5 -3.49924 | opp_overlap 1883627, overlap 1883627 TAATTGTAAAATAAA AACACCTTAATTAGAAATGTTATAT CGCA AAGTGACATTTCTAATTAAAGTGTA TTGTCATCATTTCAA TERM 1896 1883676 - 1883627 - R 100 -9 -5.46706 | opp_overlap 1883627 1883625 ATTGTAAAATAAAAA CACCTTAATTAGAAATGTTA TATCGCAAAG TGACATTTCTAATTAAAGTG TATTGTCATCATTTC TERM 1897 1883627 - 1883676 + r 87 -11.1 -3.31802 | opp_overlap 1883627, overlap 1883625 ATTGTAAAATAAAAA CACCTTAATTAGAAATGTTATAT CGCA AAGTGACATTTCTAATTAAAGTG TATTGTCATCATTTC hemY 1885270 - 1883870 - | protoporphyrinogen oxidase hemH 1886217 - 1885294 - | ferrochelatase hemE 1887312 - 1886275 - | uroporphyrinogen decarboxylase TERM 1898 1887407 - 1887384 - H 72 -6.9 -4.16842 | opp_overlap 1887388, overlap 1887388 CGTATTTTCAATAAA TAAATGTCA TAAAAC TGACATTTA ATCATAGAACTATTT TRAP 1887575 - 1888078 + | signal transduction protein TRAP SA1654 1889425 - 1888202 - | hypothetical protein SA1655 1890158 - 1889418 - | hypothetical protein hit 1890292 - 1890714 + | Hit-like protein involved in cell-cycle regulation SA1657 1890856 - 1891221 + | hypothetical protein TERM 1899 1891298 - 1891334 + F 81 -5.5 -5.28176 | gap 2, opp_overlap 1891297 1891298 AAATGCCAAATAAAC GAGATGACATTAGAAAT TAGAT ATTTCT--TGTCATCTC TTTTTTATAACTCAA SA1658 1891956 - 1892513 + | hypothetical protein prsA 1892718 - 1893680 + | hypothetical protein TERM 1900 1893733 - 1893683 - T 100 -20.6 -3.42702 | opp_overlap 1893688, overlap 1893688 CATGAGCCAATAACA CAAAACCGAGCGACCGTGGTTCAA AAA TCATACCACGGCCGCTCGGTTTTT TCGCATTAAAAATCG TERM 1901 1893688 - 1893728 + T 100 -15.5 -5.09426 | opp_overlap 1893683 1893688 GCCAATAACACAAAA CCGAGCGACCGTGGT TCAAAAATCAT ACCACGGCCGCTCGG TTTTTTCGCATTAAA TERM 1902 1893728 - 1893688 - T 100 -20.5 -4.79752 | opp_overlap 1893688, overlap 1893683 GCCAATAACACAAAA CCGAGCGACCGTGGTTCAA AAA TCATACCACGGCCGCTCGG TTTTTTCGCATTAAA TERM 1903 1893787 - 1893746 - T 87 -8.1 -4.72272 | gap 1, opp_overlap 1893746 TTTTCGCATTAAAAA TCGGACAGAGGAGCTCA-TG TTT CAGTATACTCATCTGTCCGA TATCTTTTAATTCTT cbf1 1894742 - 1893801 - | 3'-5' exoribonuclease YhaM TERM 1904 1893864 - 1893877 + g 89 -6.7 -5.61596 | opp_overlap 1893864 TATTTTATCTGTAAA CTGAC CCTT GTCAG TTTTTTTATAAGCCT TERM 1905 1894663 - 1894679 + g 70 -7.3 -3.89346 | TCTTTACCTTGTGCT GTTACAC CCT GTGTAGC TTTATGCACTAAGAA SA1661 1897675 - 1894739 - | hypothetical protein TERM 1906 1896283 - 1896295 + g 72 -4.9 -4.7657 | opp_overlap 1896283 TTAAAAGAATAAACG TTGTT CGT AACAA TTTTTGACGTTTTTG SA1662 1898861 - 1897665 - | hypothetical protein TERM 1907 1899200 - 1899216 + r 75 -9.5 -2.93073 | TTCAAAAATTTCAGT CGGAAAT GCA ATTTCCG TAATTGTTAACACCG TERM 1908 1899494 - 1899462 - R 85 -7.1 -4.87318 | opp_overlap 1899462 1899461 TTCAAAATGCAAAAA GGAAGTTAGGACA CGTTTAC TAGCCTAACTTCC GTTACTGAATGCATC TERM 1909 1899746 - 1899716 - R 100 -11.2 -5.79588 | opp_overlap 1899716 1899714 TCAAAACTAAAAAAA CTACCCACAAAGTC TCG GACTCTGTCGGCAG TCTATTCCTCTATTT SA1663 1900133 - 1899789 - | hypothetical protein TERM 1910 1899885 - 1899896 + g 70 -4.4 -4.77896 | ATTCATTAATGCAGA GATG TTTT CATC TTTTTCAATTGCTTG SA1664 1901326 - 1900202 - | hypothetical protein SA1665 1901969 - 1901505 - | hypothetical protein SA1666 1902948 - 1902325 - | hypothetical protein SA1667 1904082 - 1902970 - | hypothetical protein SA1668 1904245 - 1905066 + | hypothetical protein TERM 1911 1905256 - 1905266 + T 70 -5.4 -4.63184 | opp_overlap 1905256 ACATCCTTGGATAAT GACT TGT AGTC TTTTTCAACTGCGTT TERM 1912 1905500 - 1905469 - T 85 -6 -5.4492 | GACATAGACAAAAAA TAAAGCTTGAACAC TATA ATGCCCAAACTTTA TTTTATATTAATATT fumC 1906904 - 1905519 - | fumarate hydratase TERM 1913 1905957 - 1905969 + g 71 -6.3 -4.09685 | opp_overlap 1905957 ACCAGGCATAATTGA TGAAC CTG GTTCA TTTTCAGGGATGGAA SA1670 1907495 - 1907100 - | hypothetical protein TERM 1914 1907948 - 1907924 - R 100 -10.1 -5.64304 | opp_overlap 1907924 GAATATAATAAAAAA GCTAGGTAACA AAA TGCTACCTAAC TTCATATTCAAGATA SAS053 1908195 - 1908043 - | hypothetical protein SA1671 1908819 - 1908220 - | hypothetical protein TERM 1915 1908653 - 1908664 + g 74 -3 -5.38326 | opp_overlap 1908653 CTAAAATCAACAGCA TGTT TTTC AACA TTTTTCTTTAATTCA SA1672 1909448 - 1908978 - | hypothetical protein SA1673 1910580 - 1909453 - | hypothetical protein TERM 1916 1909607 - 1909617 + g 79 -5.4 -5.1925 | ATCGGTCTTTCATCT GTTG TTG CAAC TTTTTTCAATTCTGG TERM 1917 1910718 - 1910672 - R 82 -6.2 -5.29445 | gap 1, opp_overlap 1910672 TTTTAATAATAAAAA GCTTGAATATATGATATA-AC TTTGTG GTGCGCATCATATATTCAAGC TTCGTTAGGTTGTTA SA1674 1911459 - 1910731 - | glutamate ABC transporter ATP-binding protein SA1675 1912771 - 1911446 - | hypothetical protein TERM 1918 1912259 - 1912271 + g 84 -6.3 -5.11836 | opp_overlap 1912258 1912259 TTTCACATTGGAAAT TCCTA ATT TAGGA TTTTGTTTTAAATAT TERM 1919 1913081 - 1913113 + r 82 -10.7 -2.61656 | opp_overlap 1913081, overlap 1913080 1913078 1913076 AAATCAATCAAAAAA GCGCTACTATCAATA TCT TATTGACAGTAACGC CTATATTTATCATAT TERM 1920 1913113 - 1913081 - R 100 -15.1 -5.33921 | opp_overlap 1913081 1913080 1913078 1913076 AAATCAATCAAAAAA GCGCTACTATCAATA TCT TATTGACAGTAACGC CTATATTTATCATAT SA1676 1914222 - 1913161 - | hypothetical protein TERM 1921 1914615 - 1914585 - H 95 -7.8 -5.63374 | GTAATACCAAAAAAA GAAGTTAAACAA TGCATAG TTGCTTAACTTC CAATATTGAACTCAT TERM 1922 1914705 - 1914726 + H 82 -4.4 -5.52384 | overlap 1914708 TCTTCATCTTTTATG GTGGGAAG GTAAAA CTTCCTGC TTTTTTTAATACACA TERM 1923 1916122 - 1916092 - g 75 -4.7 -4.9041 | gap 1 AGGAGAAAAAAAGAA GACAACCAAGCCCA ATAA TGGACT-GGCCGCC TAATAATAAAAACTC tnp 1914806 - 1916125 + | transposase TERM 1924 1916189 - 1916200 + T 79 -5.8 -5.11389 | opp_overlap 1916176, overlap 1916187 TACCCACCACATTTG GTGG AGAA CCAC TTTTATTTGTATTGT TERM 1925 1916255 - 1916233 - T 100 -13.6 -5.4433 | opp_overlap 1916237 AGAGAGAAATAAAAA GAAACCTTGT TTT ACAAGGTTTC TAATAGGTTATGTTA TERM 1926 1916237 - 1916251 + T 82 -8.6 -3.99806 | opp_overlap 1916233 AGAAATAAAAAGAAA CCTTGT TTT ACAAGG TTTCTAATAGGTTAT TERM 1927 1916405 - 1916392 - T 90 -6.7 -5.64421 | ATGGTAAACAAAAAA CTTCC CTTT GGAAG CAATTATGGAGCGGA TERM 1928 1918356 - 1918372 + T 78 -9.5 -3.22475 | overlap 1918359 TCGAACCCGCGACCC CAACCTT GGC AAGGTTG TATTCTACCGCTGAA TERM 1929 1921561 - 1921580 + T 90 -10.8 -3.66803 | opp_overlap 1921560 1921559 GAGTGTCCTACAACC CCAACAAG CAAG CTTGTTGG TTTGGGCTCTTCCCG TERM 1930 1921937 - 1921964 + T 70 -5.6 -4.28115 | AACGCGTTATTAATC TTGTGAGTGTTC TTTC GAACACTAGCGA TTATTTCTTATGAAT TERM 1931 1923247 - 1923265 + T 71 -8.8 -2.75963 | overlap 1923246 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT TERM 1932 1923678 - 1923699 + T 83 -10.3 -3.25079 | overlap 1923676 AAGACCGTCTTTCAC TTTTGAACC ATGC GGTTCAAAA TATTATCCGGTATTA TERM 1933 1923924 - 1923940 + T 73 -5.9 -4.66833 | overlap 1923925 ATACTAAATAATGTT TGTAACT TAT AGTTACG TTTTTGGAATTAACG TERM 1934 1924286 - 1924255 - T 71 -4.6 -4.69326 | opp_overlap 1924264 AGAGTCAACATAAAA CAACACTTATTTTT GTTT AAAAATTACTGTTG AAGGGATTATTTTCT TERM 1935 1924328 - 1924343 + T 70 -4 -4.90917 | CTATATGTATTTAAA GTGTAA TTCC TTACGC TTTTTACTTCAGTTT TERM 1936 1924554 - 1924523 - T 100 -11.1 -5.4111 | opp_overlap 1924523 1924526 1924546 AATAAGCATAAAAAA GAAGTTAAACAAC TTTCAT GTCGTTTAACTTC TTAAATATTACACTT TERM 1937 1924523 - 1924554 + T 73 -8.9 -3.19293 | opp_overlap 1924523, overlap 1924526 1924546 AATAAGCATAAAAAA GAAGTTAAACAAC TTTCAT GTCGTTTAACTTC TTAAATATTACACTT SA1678 1925070 - 1924624 - | hypothetical protein SA1679 1926117 - 1925167 - | hypothetical protein SA1680 1926578 - 1926123 - | hypothetical protein gsaB 1926659 - 1927948 + | glutamate-1-semialdehyde aminotransferase TERM 1938 1928019 - 1928033 + F 71 -7.2 -3.80189 | opp_overlap 1928028, overlap 1928028 AGATTCATTTTATAT CGTTAA CTA TTAACG TTTAACTTGATATGT TERM 1939 1928719 - 1928730 + G 71 -3 -5.06585 | opp_overlap 1928719, overlap 1928713 ATAATTCATTAAATA TATC CTCA GATA TTTTTATGTGGTTTA SA1682 1928241 - 1929335 + | hypothetical protein TERM 1940 1929403 - 1929455 + T 73 -8.9 -3.21276 | gap 1, opp_overlap 1929402 1929410, overlap 1929410 TCTCGAAATTAAATT TAAAAAAGCAGTAAGATTATTTTC AATGAA GAAAATC-TCTTACTGCTTTTCTA TGTTATGACCCCACC TERM 1941 1929448 - 1929410 - T 84 -7 -5.22943 | gap 1, opp_overlap 1929403 1929410, overlap 1929402 ATTAAATTTAAAAAA GCAGTAAGATTATTTTC AATGAA GAAAATC-TCTTACTGC TTTTCTATGTTATGA TERM 1942 1929410 - 1929448 + T 80 -7 -4.71223 | gap 1, opp_overlap 1929410 1929402, overlap 1929403 ATTAAATTTAAAAAA GCAGTAAGATTATTTTC AATGAA GAAAATC-TCTTACTGC TTTTCTATGTTATGA SA1683 1931261 - 1929525 - | hypothetical protein TERM 1943 1931106 - 1931089 - G 70 -7.1 -3.76641 | opp_overlap 1931088 ATGGCAATAGTTAAA TGATGAA CTTT TTCATCA GTCGTTAGTGCGTGG SA1684 1932094 - 1931552 - | hypothetical protein SA1685 1933434 - 1932397 - | hypothetical protein SA1686 1933586 - 1934563 + | hypothetical protein TERM 1944 1934656 - 1934602 - T 100 -10.2 -5.31456 | opp_overlap 1934609, overlap 1934609 TTAATCTATAAAAAA TGAACAACCGGGCAGAATGAAAATCA AAA CGATTTTTACTCTGTCCGGTTTTTTA ATGTAAAACTATGAA TERM 1945 1934609 - 1934649 + T 100 -14.2 -5.21709 | opp_overlap 1934602 1934609 ATAAAAAATGAACAA CCGGGCAGAATGAAAATC AAAAC GATTTTTACTCTGTCCGG TTTTTTAATGTAAAA TERM 1946 1934649 - 1934609 - T 100 -12.7 -4.08846 | opp_overlap 1934609, overlap 1934602 ATAAAAAATGAACAA CCGGGCAGAATGAAAATCA AAA CGATTTTTACTCTGTCCGG TTTTTTAATGTAAAA SA1687 1935660 - 1934824 - | hypothetical protein SA1688 1937186 - 1935669 - | hypothetical protein SA1689 1937515 - 1937201 - | hypothetical protein recX 1938311 - 1937493 - | recombination regulator RecX TERM 1947 1937631 - 1937641 + g 72 -2.6 -5.29782 | GTACTTCTTTCGATT TTTA TTA TAAA TTTTTTCTAAATCTC TERM 1948 1938454 - 1938423 - R 100 -9.6 -5.46657 | opp_overlap 1938435 GATGCTAACAAAAAA TCACACTATCATCT TTTA AAATGAAAGTGTGA TTACAAGCAAATCTG sgtB 1939380 - 1938571 - | glycosyltransferase TERM 1949 1939633 - 1939591 - R 88 -9.4 -4.10657 | overlap 1939596 TTATATTTTGTAAAA TAAAAGACCATCCCTATTAA ATG CCAATAGAGACGACCTTTTA TTTGTTATTCATTTA TERM 1950 1939628 - 1939596 - R 75 -4.9 -5.07652 | overlap 1939591 TTTTGTAAAATAAAA GACCATCCCTATTAA ATG CCAATAGAGACGACC TTTTATTTGTTATTC SA1692 1940235 - 1939720 - | hypothetical protein SAS054 1940527 - 1940366 - | hypothetical protein SA1693 1940751 - 1941902 + | hypothetical protein SA1694 1942692 - 1942162 - | hypothetical protein ampS 1944029 - 1942782 - | aminopeptidase ampS SA1696 1944247 - 1944041 - | hypothetical protein SA1697 1944388 - 1944852 + | hypothetical protein SA1698 1944859 - 1945134 + | hypothetical protein TERM 1951 1946487 - 1946476 - g 74 -3 -5.34365 | overlap 1946467 TGACAATAATAAAAA TCAT TATA ATGA GAACACTAGATACGA SA1699 1945412 - 1946629 + | hypothetical protein TERM 1952 1946629 - 1946687 + T 100 -19.3 -3.57873 | gap 1, opp_overlap 1946631 1946642, overlap 1946631 1946642 GCTTAAAAAAGACTA AACACCAACAAAACAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTGTTTT-TTGGTGTC TATTTGATGTTATAT TERM 1953 1946631 - 1946685 + T 100 -21.9 -3.35191 | gap 1, opp_overlap 1946631 1946642, overlap 1946629 1946642 TTAAAAAAGACTAAA CACCAACAAAACAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTGTTTT-TTGGTG TCTATTTGATGTTAT TERM 1954 1946685 - 1946631 - T 100 -19.7 -4.18668 | gap 1, opp_overlap 1946631 1946629 1946642, overlap 1946642 TTAAAAAAGACTAAA CACCAACAAAACAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTGTTTT-TTGGTG TCTATTTGATGTTAT TERM 1955 1946642 - 1946675 + T 100 -14.7 -5.25893 | opp_overlap 1946631 1946642, overlap 1946631 1946629 TAAACACCAACAAAA CAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTG TTTTTTGGTGTCTAT TERM 1956 1946675 - 1946642 - T 100 -12.5 -4.81163 | opp_overlap 1946642 1946631 1946629, overlap 1946631 TAAACACCAACAAAA CAGAGGTTTTCGCTA ATGA TTGCGAAGACCTCTG TTTTTTGGTGTCTAT vraR 1947371 - 1946742 - | two-component response regulator vraS 1948404 - 1947361 - | two-component sensor histidine kinase SA1702 1949102 - 1948401 - | hypothetical protein TERM 1957 1949042 - 1949007 - G 72 -4.8 -4.8269 | opp_overlap 1949012 TAGAACGAGTAAAAA GCCAATTTTTTCAAAA AATA TGTAGTAAAAATTGGC AATAATCATTAATGC SA1703 1949503 - 1949117 - | hypothetical protein TERM 1958 1949683 - 1949648 - R 100 -9.8 -4.51097 | overlap 1949650 TTAATTATTATAAAA CAGTTCCGAAACCAAT ATGA ATAGGCTCCGGAACTA AATGATGTTCATACT TERM 1959 1949681 - 1949650 - R 89 -10.2 -3.85857 | overlap 1949648 AATTATTATAAAACA GTTCCGAAACCAAT ATGA ATAGGCTCCGGAAC TAAATGATGTTCATA map 1950478 - 1949720 - | methionine aminopeptidase TERM 1960 1950585 - 1950609 + H 70 -8.8 -2.57463 | overlap 1950584 AGTGAGACATAGTGT GATAAAGAAA AAATA TTTCTTTATC GTTGTACCCCAACTT TERM 1961 1950695 - 1950711 + H 72 -8 -3.68024 | TGCACATTATCGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 1962 1950754 - 1950770 + H 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 1963 1951059 - 1951069 + G 77 -3.2 -5.41143 | CAGAACAATTAAAAC TGGT ATT GCCA TTTTTTTAACAGCTG SA1705 1951009 - 1951995 + | hypothetical protein TERM 1964 1952151 - 1952174 + T 72 -6.8 -4.15222 | opp_overlap 1952157, overlap 1952153 1952157 AACTTGCATTGTCTG TAGAAATTGG GAAT CCAATTTCTC TTTGTTGGGGCCCCT TERM 1965 1952153 - 1952172 + T 81 -9.4 -3.6761 | opp_overlap 1952157, overlap 1952151 1952157 CTTGCATTGTCTGTA GAAATTGG GAAT CCAATTTC TCTTTGTTGGGGCCC TERM 1966 1952219 - 1952207 - T 90 -7.7 -5.1925 | opp_overlap 1952206 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SA1706 1952878 - 1952426 - | hypothetical protein TERM 1967 1952948 - 1952991 + r 71 -6.8 -3.96531 | opp_overlap 1952950, overlap 1952950 TCACTAGAACAAAAA AACACACATCAATTTGGTTG TTTC CATCCAAAATAATGTGTGTG TTTATACATATATGA TERM 1968 1952989 - 1952950 - R 100 -11.6 -5.89921 | opp_overlap 1952948 1952950 ACTAGAACAAAAAAA CACACATCAATTTGGTTG TTTC CATCCAAAATAATGTGTG TGTTTATACATATAT TERM 1969 1952950 - 1952989 + r 81 -9.4 -3.5697 | opp_overlap 1952950, overlap 1952948 ACTAGAACAAAAAAA CACACATCAATTTGGTTG TTTC CATCCAAAATAATGTGTG TGTTTATACATATAT SA1707 1953795 - 1953064 - | hypothetical protein SA1708 1955110 - 1953797 - | hypothetical protein TERM 1970 1953959 - 1953976 + g 70 -7.1 -3.86266 | TTCAACCTCTGCTAA CTTCAAT CGCA ATTGAAG TTCTTCTGCTCGTGT SA1709 1955402 - 1955902 + | hypothetical protein TERM 1971 1955997 - 1956036 + F 85 -5.9 -5.46698 | gap 1, opp_overlap 1956011 TATTATTTTGCTTTA CGGAGATCACTAGATTCA TTTTC TGAATC-ATTGATCTGCG TTTTTTCATTTTCAA SA1710 1956292 - 1956846 + | hypothetical protein SA1711 1957984 - 1956914 - | hypothetical protein TERM 1972 1957242 - 1957255 + g 74 -5.3 -4.78753 | GTTGCAAATGTGCGT TCAGT CCCT ACTGA TTTTCTTACTCTTGA SA1712 1958761 - 1958231 - | hypothetical protein SA1713 1960292 - 1958931 - | hypothetical protein SA1714 1961320 - 1960373 - | putative lipid kinase TERM 1973 1961505 - 1961521 + r 72 -8 -3.68024 | opp_overlap 1961499 TGCACATTATTGTAA GCTGAC AGAAA GTCAGC TTCTATGTTGGGGCC TERM 1974 1961561 - 1961577 + r 72 -8 -3.68024 | opp_overlap 1961555 TGCACATTATTGTAA GCTGAC AGAAA GTCAGC TTCTATGTTGGGGCC TERM 1975 1961623 - 1961611 - R 90 -7.7 -5.1925 | opp_overlap 1961610 1961604 1961611 CTAGAATTGAAAAAA GCTTG TTA CAAGC GTATTTTCTTTCAGT TERM 1976 1962055 - 1962016 - R 100 -11.7 -4.17296 | opp_overlap 1962016, overlap 1962020 TTCTATAGATATAAA TAAACCCTCGATTGC ATCTAAGTCA GCAATCAAGGGTTTA TTTTTTAAATCTTCA TERM 1977 1962016 - 1962055 + r 100 -9.5 -5.1615 | opp_overlap 1962016 1962020 TTCTATAGATATAAA TAAACCCTCGATTGC ATCTAAGTCA GCAATCAAGGGTTTA TTTTTTAAATCTTCA TERM 1978 1962051 - 1962020 - R 85 -8.1 -4.66625 | opp_overlap 1962016, overlap 1962016 ATAGATATAAATAAA CCCTCGATTGC ATCTAAGTCA GCAATCAAGGG TTTATTTTTTAAATC TERM 1979 1962059 - 1962087 + r 70 -6.2 -4.05861 | overlap 1962077 ATCAAGGGTTTATTT TTTAAATCTTCA TAGTT TGATGATTTAAA TTATCTTTTATCTAA gatB 1963515 - 1962088 - | aspartyl/glutamyl-tRNA amidotransferase subunit B SA1716 1964985 - 1963528 - | glutamyl-tRNAGln amidotransferase subunit A TERM 1980 1964915 - 1964927 + g 86 -2.7 -5.9362 | ATATCTTTAACAACA TCAGA TGG TTTGA TTTTTTTGTCTTTTA gatC 1965289 - 1964987 - | aspartyl/glutamyl-tRNA amidotransferase subunit C putP 1965656 - 1967194 + | high affinity proline permease TERM 1981 1967220 - 1967259 + T 100 -11.7 -5.33331 | opp_overlap 1967220 TTAACAAATTAAAAA GGTACTAATGTTAATCA AAATTA TGACTAACATTGGTACC TTTTTATTATCTTTA TERM 1982 1967259 - 1967220 - T 100 -11.7 -5.09521 | opp_overlap 1967220 TTAACAAATTAAAAA GGTACTAATGTTAATCA AAATTA TGACTAACATTGGTACC TTTTTATTATCTTTA SA1719 1968482 - 1967283 - | hypothetical protein lig 1970498 - 1968495 - | DNA ligase (polydeoxyribonucleotide syntase) TERM 1983 1969260 - 1969246 - G 73 -8.6 -3.20723 | TTTGGATTAATGCAA CGAAGT GCT ACTTCG CCTTCAATACGTACT TERM 1984 1970271 - 1970282 + g 73 -4.4 -5.00616 | ACTTAACATTGGCGT GTCA TGGT TGAC TTTTTTGAAAGAGGC pcrA 1972694 - 1970502 - | ATP-depentend DNA helicase pcrB 1973383 - 1972691 - | geranylgeranylglyceryl phosphate synthase-like protein TERM 1985 1973470 - 1973482 + r 75 -4.9 -5.14563 | TGAATTTTAAGTTCT TTTAC TCT GTAAA TTTTTTCGTGAAAAA TERM 1986 1973539 - 1973499 - R 93 -8.6 -5.00616 | opp_overlap 1973499 1973525, overlap 1973529 TTTTTCGTGAAAAAA CAATGATTATCTACCT TATTAGTGC AGATAGATAACCATTG TTTATCGTTCATTTA SA1723 1973857 - 1973555 - | hypothetical protein TERM 1987 1973919 - 1973954 + r 85 -7.8 -4.69048 | TTAATCTATTAAAGT GTAGCGATTTATATTT TATT AAATCTGAATCGTTAC TTTATTTAATTTTAT purB 1975261 - 1973966 - | adenylosuccinate lyase TERM 1988 1974286 - 1974264 - G 70 -7 -3.78962 | TCAAATACAGTTAAA CGGTCCACAA TAT TTGTGAAACG ATTCAATGCATAATC TERM 1989 1976801 - 1976787 - g 70 -4.3 -4.68132 | CAATATATAAATAAA CTTGA GAATT TCAAG ATAAGAGAAACTCAA TERM 1990 1977126 - 1977104 - g 72 -6.2 -4.37199 | AGTAGAATCAAGAAA TGGTATGCAC GCA GGGCATGCCA TGGCAGTTGTTGGGA SA1725 1976121 - 1977287 + | staphopain, cysteine proteinase SA1726 1977318 - 1977644 + | hypothetical protein TERM 1991 1977813 - 1977780 - T 79 -8.3 -3.89411 | gap 2, opp_overlap 1977780, overlap 1977771 TTAAAATATTAAGAA CCCCCAGCATATGCT TTATAT AGC-T-TGCTGGGGG TTTCTCATACAATAT TERM 1992 1977780 - 1977813 + T 79 -8.3 -3.97388 | gap 2, opp_overlap 1977780 1977771 TTAAAATATTAAGAA CCCCCAGCATATGCT TTATAT AGC-T-TGCTGGGGG TTTCTCATACAATAT TERM 1993 1977899 - 1977858 - T 78 -6.7 -4.57482 | opp_overlap 1977860 1977887, overlap 1977860 1977887 GCATGTATAAACAAA TAGGCTATTCAAAGTAAAA TTAC TCAAACTTTGAATAGCCTT TCCTCTTCAAATAGT TERM 1994 1977860 - 1977897 + T 82 -8.7 -3.93038 | opp_overlap 1977858 1977860 1977887, overlap 1977887 ATGTATAAACAAATA GGCTATTCAAAGT AAAATTACTCAA ACTTTGAATAGCC TTTCCTCTTCAAATA TERM 1995 1977897 - 1977860 - T 86 -9.3 -3.89305 | opp_overlap 1977860 1977887, overlap 1977858 1977887 ATGTATAAACAAATA GGCTATTCAAAGTAAAA TTAC TCAAACTTTGAATAGCC TTTCCTCTTCAAATA SA1727 1978692 - 1978090 - | hypothetical protein nadE 1979784 - 1978963 - | NAD synthetase TERM 1996 1979210 - 1979220 + g 71 -6.8 -4.15044 | opp_overlap 1979210, overlap 1979208 TACGCTAATAATTGA CGAC CTT GTCG TTTATTCAAACCAAA SA1729 1981246 - 1979777 - | nicotinate phosphoribosyltransferase SA1730 1981430 - 1982506 + | hypothetical protein TERM 1997 1983076 - 1983086 + G 77 -5.4 -4.8622 | TTGATCAAAATGCGA CATC ATT GATG TTTTTAATTACACCA SA1731 1982526 - 1983320 + | hypothetical protein TERM 1998 1983357 - 1983404 + T 76 -5 -5.11389 | opp_overlap 1983359 1983361, overlap 1983361 AATTTAAATAAAATA AAGAGTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGACTTTC TTTTGTTTGTATTGT TERM 1999 1983402 - 1983359 - T 88 -7.6 -4.96996 | opp_overlap 1983357 1983361, overlap 1983361 TTTAAATAAAATAAA GAGTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGACTT TCTTTTGTTTGTATT TERM 2000 1983361 - 1983400 + T 88 -8 -5.00611 | opp_overlap 1983359 1983361, overlap 1983357 TAAATAAAATAAAGA GTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGAC TTTCTTTTGTTTGTA TERM 2001 1983400 - 1983361 - T 95 -10.2 -4.08474 | opp_overlap 1983361 1983357, overlap 1983359 TAAATAAAATAAAGA GTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGAC TTTCTTTTGTTTGTA SA1732 1985072 - 1983510 - | hypothetical protein SA1733 1986374 - 1985277 - | hypothetical protein SA1734 1986743 - 1987303 + | hypothetical protein SA1735 1987356 - 1988285 + | putative manganese-dependent inorganic pyrophosphatase TERM 2002 1988329 - 1988369 + F 95 -7.3 -5.67283 | opp_overlap 1988329 GTTGTATTTAACTAA CAGTTCATT-AAAGTAGAA TTTAT TTC-ACTTTCAATGAACTG TTTTTTATTTACGTT aldH 1988703 - 1990082 + | aldehyde dehydrogenase TERM 2003 1990101 - 1990079 - T 70 -5 -4.56775 | opp_overlap 1990072, overlap 1990083 AGCTTTCTTTAAAAA TTAATTTTTG AGA CAAAAATAAA CCATGCTTCCATAAT SA1737 1991230 - 1990202 - | hypothetical protein TERM 2004 1991008 - 1990992 - G 71 -6.7 -4.1891 | GCTTTTGAAGACAAA CATTTAT TTA ATAAATG CAATTCACCATTGTC SA1738 1991500 - 1991901 + | hypothetical protein tnp 1992089 - 1991916 - | putative transposase TERM 2005 1992444 - 1992389 - R 100 -13.1 -3.91032 | gap 1, opp_overlap 1992396, overlap 1992396 GAAGTATTGTATAAA TAGAGAACAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTGTTTTTTA GGGATTTATGTCCCA TERM 2006 1992437 - 1992396 - R 100 -15.6 -3.80279 | gap 1, opp_overlap 1992396, overlap 1992389 TGTATAAATAGAGAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTG TTTTTTAGGGATTTA TERM 2007 1992396 - 1992437 + r 100 -15.6 -5.07107 | gap 1, opp_overlap 1992396 1992389 TGTATAAATAGAGAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTG TTTTTTAGGGATTTA SAS056 1992647 - 1992474 - | hypothetical protein TERM 2008 1993231 - 1993221 - g 85 -6.8 -5.23016 | opp_overlap 1993221 AAAGAATGGAAAAAA CGTG TCC CACG TTTCGATATAGATGT SA1739 1993098 - 1994138 + | hypothetical protein TERM 2009 1994184 - 1994140 - T 85 -8.3 -4.67607 | opp_overlap 1994142 1994145 1994177, overlap 1994143 TTGCCAACAAATAAA TAA-CACCGATATTAGAGAAA TTATG CTTC-CTAATATCGGTGCTTA CATCCTTTATTTATT TERM 2010 1994180 - 1994143 - T 100 -11.6 -4.43668 | gap 1, opp_overlap 1994142 1994145 1994177, overlap 1994140 CCAACAAATAAATAA CACCGATATTAGAGAAA TTATG CTTC-CTAATATCGGTG CTTACATCCTTTATT SA1740 1995037 - 1994195 - | hypothetical protein TERM 2011 1994263 - 1994274 + g 74 -3 -5.2853 | overlap 1994258 1994269 TTTTCCCAACTTTAC CATT AGTA AATG TTTTATTTTTAACTA TERM 2012 1994373 - 1994392 + g 74 -6.4 -4.28018 | ATATCTCCTTGTTTA GTAGAAGC TTTT GCATCTAC TTTTGATGGCATGTT SA1741 1995591 - 1995034 - | hypothetical protein SA1742 1996175 - 1995651 - | hypothetical protein SA1743 1996296 - 1996859 + | hypothetical protein TERM 2013 1996874 - 1996918 + T 100 -8.8 -5.12068 | opp_overlap 1996877 1996878, overlap 1996877 1996878 AATTTACAATAAGAC AAACTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAATTA TTTTTATTAAATGTC TERM 2014 1996877 - 1996915 + T 100 -10.5 -4.64495 | opp_overlap 1996877 1996878, overlap 1996874 1996878 TTACAATAAGACAAA CTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAA TTATTTTTATTAAAT TERM 2015 1996915 - 1996877 - T 100 -12.7 -4.37544 | opp_overlap 1996877 1996874 1996878, overlap 1996878 TTACAATAAGACAAA CTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAA TTATTTTTATTAAAT TERM 2016 1996878 - 1996914 + T 100 -14 -3.3707 | opp_overlap 1996877 1996878, overlap 1996877 1996874 TACAATAAGACAAAC TTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAA ATTATTTTTATTAAA TERM 2017 1996914 - 1996878 - T 100 -14 -3.21442 | opp_overlap 1996878 1996877 1996874, overlap 1996877 TACAATAAGACAAAC TTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAA ATTATTTTTATTAAA SA1744 1997665 - 1996925 - | hypothetical protein SA1745 1998537 - 1997665 - | hypothetical protein TERM 2018 1998008 - 1998033 + g 71 -7.7 -3.56704 | opp_overlap 1998005, overlap 1998005 TCTTCTAACTTATGA CTTGATATTAG AATT CTCATATCAAG TTCATTTACTAAAGA SA1746 1999214 - 1998534 - | hypothetical protein TERM 2019 1999230 - 1999242 + r 74 -6.3 -4.37067 | TTAAAAACCTTCTTC CATCA ATT TGATG TTTTCATGATATTTA SA1747 2000111 - 1999215 - | hypothetical protein TERM 2020 1999707 - 1999729 + g 74 -3.4 -5.25906 | TGCTAGTGATAATTT CATTTTCATC CCA GTCGAAAATG TTTTTATTGATTTAT TERM 2021 1999786 - 1999819 + g 76 -4.6 -5.10029 | opp_overlap 1999777 TAAAATTCAAATACT TGATGGTCCCATTT ACGATA AAAAGGGGCAATCA TTTTTTCAAGTTGCT SA1748 2000488 - 2000108 - | hypothetical protein SAS057 2000922 - 2000746 - | hypothetical protein TERM 2022 2001149 - 2001115 - H 100 -16.6 -2.89981 | opp_overlap 2001118, overlap 2001118 CAGAATTATACTACA CAACCCCAAGTCTGGT ACC AGCAGACTTGGGGTTA TTTATGTGTGTAGGA TERM 2023 2001146 - 2001118 - H 100 -16.1 -3.58766 | opp_overlap 2001118, overlap 2001115 AATTATACTACACAA CCCCAAGTCTGGT ACC AGCAGACTTGGGG TTATTTATGTGTGTA TERM 2024 2001118 - 2001146 + H 100 -16.1 -4.2028 | opp_overlap 2001118 2001115 AATTATACTACACAA CCCCAAGTCTGGT ACC AGCAGACTTGGGG TTATTTATGTGTGTA SA1749 2001463 - 2002749 + | hypothetical protein TERM 2025 2002760 - 2002793 + T 95 -6.2 -5.93252 | GATAATTAATTTCAA CCAATAATCTGA TGAGTATGAC TCGGATTATTGG TTTTTTATTTTTAAA TERM 2026 2003009 - 2002986 - T 100 -11 -4.39571 | opp_overlap 2002986 TCTACAAATGTAAAA GGCACCCCAC GATT GTGAGATGCC TTATTATAAAATTAA SA1750 2003348 - 2003028 - | truncated map-w protein TERM 2027 2003198 - 2003242 + g 74 -6 -4.46267 | overlap 2003208 TTATCCCTTGATCAT TTGCCATTGCTGATTTAAGT TTTAT ACTTAAATCATTAATTGTAA TTTTGCTTGCATTAT TERM 2028 2003208 - 2003232 + g 77 -8.8 -3.53814 | overlap 2003198 ATCATTTGCCATTGC TGATTTAAGT TTTAT ACTTAAATCA TTAATTGTAATTTTG SA1751 2004763 - 2003333 - | truncated map-w protein hlb 2005149 - 2005349 + | truncated beta-hemolysin TERM 2029 2005519 - 2005562 + F 88 -7.6 -4.88067 | opp_overlap 2005521 TGTTTGTGTGGAATG TACACCCCAAAAGCTAGACT GAAA AATCTATTTTTTGAGGTGTA TTTTTATAGGTAAAT SAS058 2005721 - 2005900 + | hypothetical protein SA1753 2005924 - 2006211 + | hypothetical protein TERM 2030 2006527 - 2006500 - T 72 -8.5 -3.25824 | opp_overlap 2006505, overlap 2006505 TATTATCTAGAAAAT TAAAACCACCC GTAAAA GGGTGGTTTTT TTAATATTTACTTTT TERM 2031 2006505 - 2006522 + T 100 -8.4 -5.66989 | opp_overlap 2006500 2006505 TCTAGAAAATTAAAA CCACCC GTAAAA GGGTGG TTTTTTTAATATTTA TERM 2032 2006522 - 2006505 - T 87 -8.4 -4.73108 | opp_overlap 2006505, overlap 2006500 TCTAGAAAATTAAAA CCACCC GTAAAA GGGTGG TTTTTTTAATATTTA SA1754 2006878 - 2006528 - | hypothetical protein TERM 2033 2007037 - 2007058 + H 71 -8.8 -2.73364 | opp_overlap 2007037 AGAAAAACAAAAAAA GGTAAGCA CCGAAA TGCTTACC TACTTCCCATAAACA TERM 2034 2007058 - 2007037 - H 100 -9.5 -6.23317 | opp_overlap 2007037 AGAAAAACAAAAAAA GGTAAGCAC CGAA ATGCTTACC TACTTCCCATAAACA TERM 2035 2007258 - 2007273 + H 70 -9 -2.61912 | opp_overlap 2007258, overlap 2007257 TATAGCACAAAAAAA CTAGCC CGAA GGCTAG CTTATGAATAGATGA TERM 2036 2007273 - 2007258 - H 100 -9 -5.69473 | opp_overlap 2007258 2007257 TATAGCACAAAAAAA CTAGCC CGAA GGCTAG CTTATGAATAGATGA SA1755 2007561 - 2008010 + | chemotaxis-inhibiting protein CHIPS TERM 2037 2008049 - 2008096 + T 100 -12.4 -2.96452 | gap 1, opp_overlap 2008057, overlap 2008051 2008053 2008057 TAGATATTTCTTTTT TATATAAAGGTTTGGC-AGACAT TTC ATAACTTGCCAAACCTTTATATA TCTAATTATCAAACT TERM 2038 2008051 - 2008094 + T 79 -10.6 -3.03474 | gap 1, opp_overlap 2008057, overlap 2008049 2008053 2008057 GATATTTCTTTTTTA TATAAAGGTTTGGC-AGACAT TTC ATAACTTGCCAAACCTTTATA TATCTAATTATCAAA TERM 2039 2008053 - 2008092 + T 73 -8.8 -3.07104 | gap 1, opp_overlap 2008057, overlap 2008051 2008049 2008057 TATTTCTTTTTTATA TAAAGGTTTGGC-AGACAT TTC ATAACTTGCCAAACCTTTA TATATCTAATTATCA TERM 2040 2008088 - 2008057 - T 74 -7.4 -4.03234 | gap 1, opp_overlap 2008053 2008051 2008049 2008057 TCTTTTTTATATAAA GGTTTGGCA-GACAT TTC ATAACTTGCCAAACC TTTATATATCTAATT SA1756 2008311 - 2008105 - | truncated amidase SA1757 2008571 - 2008308 - | truncated amidase TERM 2041 2008676 - 2008648 - R 75 -4.6 -5.16133 | gap 1, overlap 2008651 2008652 ATTATAACATAAAAA GCAC-CCCGTAAA CTAT TATACGGGAATGC TAAAGTCATATATAC TERM 2042 2008759 - 2008738 - R 78 -3 -5.58179 | TATCATAAGAAAAAA CACCCA GTGACATGCT TGGGTG AACAAGGATGTAAAT TERM 2043 2008914 - 2008889 - R 100 -12.7 -5.84432 | TATAACATAAAAAAA TAGGCAAGTAC CGAA GTACCTGCCTA AAAAAGGATTATCCA sak 2009577 - 2009086 - | staphylokinase precursor TERM 2044 2009589 - 2009605 + r 84 -6.7 -5.17744 | GCATGGCGCTTCCTC CAAATAT AAT ATATTTG TTTTTATTCATCTCT SA1759 2010523 - 2009768 - | lytic enzyme TERM 2045 2009985 - 2010016 + g 85 -9.5 -3.91352 | opp_overlap 2009982 2009985 TTCGCATTAAAATAA GCACCTTTTGACC ATTTAA GGTTATAAGGTGC TTTACTTCCAACTGT TERM 2046 2010016 - 2009985 - G 75 -7.3 -4.25256 | opp_overlap 2009985, overlap 2009982 TTCGCATTAAAATAA GCACCTTTTGACC ATTTAA GGTTATAAGGTGC TTTACTTCCAACTGT SA1760 2010789 - 2010535 - | hypothetical protein TERM 2047 2010748 - 2010727 - G 70 -2.3 -5.33405 | gap 1 TTGAGCAAATAAAAA GATAGCTGAC AAT ATC-GCTACC CAAAATGATTTTTGT TERM 2048 2010837 - 2010820 - R 95 -7.7 -5.48213 | opp_overlap 2010820 2010818 TATCCAAAATAAAAA GACGACT AATA AGCCGTC TATTTGATATTTATA TERM 2049 2010908 - 2010883 - R 100 -10.5 -5.07275 | TTATATATAGAAAAA GGGCAACATGC GCAA ACATGTTACCC TAGTGAGCCCGTTAA TERM 2050 2010969 - 2011003 + r 74 -2.3 -5.5604 | gap 1, opp_overlap 2010984 AAATTAATAACCATT TAACCATCG-AAAC CAGCCAAA GTTAGCGATGGTTA TTTTTTATTGCTTAA SAS059 2011135 - 2011001 - | hypothetical protein sep 2012162 - 2011380 - | enterotoxin P SAS060 2012447 - 2012271 - | hypothetical protein TERM 2051 2012497 - 2012478 - R 100 -10 -5.54338 | CAATCAAAATAAAAA GCCAGTGC CGAT GCACTGAC CAAAAACATTATTTA SA1762 2012948 - 2012574 - | hypothetical protein TERM 2052 2012642 - 2012657 + g 70 -4.6 -4.64861 | opp_overlap 2012633 TTACAAGCGCCCATA TGGCAC CTAC GAGCCA TTTATTTTGGGCGAG TERM 2053 2012994 - 2012972 - R 81 -8.5 -4.16016 | opp_overlap 2012972 CTACTTTCTAAGAAA GCTATGAGC GTAAT GCTCATAAC TTAGTATAGTTACAT SA1763 2013333 - 2013004 - | hypothetical protein SAS061 2013489 - 2013337 - | hypothetical protein SA1764 2017264 - 2013482 - | hypothetical protein TERM 2054 2014223 - 2014235 + g 75 -4.9 -4.87626 | GAATGCGAATCGGTT TAAAC CAG GTTTA TTTTTGGTGTTCGGA TERM 2055 2016625 - 2016639 + g 71 -5.7 -4.61873 | CATTTTCAGGTCCCA CAGCA ATTAA TGCTG TTTTGATTTCTGACA SA1765 2018764 - 2017280 - | hypothetical protein TERM 2056 2018709 - 2018691 - G 82 -7.4 -4.6008 | opp_overlap 2018691 AAAACATAATTAAAA GAGGGTAT TTC AAACCCTC TTTCGACATACAACC TERM 2057 2018691 - 2018709 + g 71 -7.4 -3.57144 | opp_overlap 2018691 AAAACATAATTAAAA GAGGGTAT TTC AAACCCTC TTTCGACATACAACC SA1766 2023290 - 2018761 - | hypothetical protein TERM 2058 2021873 - 2021884 + g 73 -4.4 -4.9445 | GAAAACCAATCAACT GCTA CAGA TAGC TTTTTGATTAATTCT TERM 2059 2023349 - 2023324 - R 100 -11.3 -5.51165 | AAAAGTTCAAAAAAA TAACCCTAACC AAAC GGTTAAGGTTA AAACGCATCAATTAA SA1767 2023885 - 2023535 - | hypothetical protein TERM 2060 2023936 - 2023917 - R 88 -7.8 -4.87803 | opp_overlap 2023919, overlap 2023919 TATTTTCAAATAAAA TAGAGGGG TTGC CCCCTCTT ATGCTTCTACATTTA TERM 2061 2023934 - 2023919 - R 95 -10.4 -4.05678 | opp_overlap 2023919, overlap 2023917 TTTTCAAATAAAATA GAGGGG TTGC CCCCTC TTATGCTTCTACATT TERM 2062 2023919 - 2023934 + r 85 -10.4 -3.57441 | opp_overlap 2023919 2023917 TTTTCAAATAAAATA GAGGGG TTGC CCCCTC TTATGCTTCTACATT SA1768 2024845 - 2024201 - | hypothetical protein TERM 2063 2024674 - 2024685 + g 81 -5.8 -4.93365 | CAATTGGACCGCCAT CAGC ATAA GCTG TTTTTAGTTCTCCAC TERM 2064 2024890 - 2024869 - R 73 -3.6 -5.24129 | opp_overlap 2024870, overlap 2024870 CCTCCTTATAAAAAA TGCCCTCG TAAACG CGAGAGCT TCTATATGTTTTAAA TERM 2065 2024889 - 2024870 - R 71 -7.1 -3.73995 | opp_overlap 2024870, overlap 2024869 CTCCTTATAAAAAAT GCCCTCG TAAACG CGAGAGC TTCTATATGTTTTAA SA1769 2025253 - 2024846 - | hypothetical protein SA1770 2025654 - 2025250 - | hypothetical protein SA1771 2026013 - 2025651 - | hypothetical protein SA1772 2026281 - 2025997 - | hypothetical protein SA1773 2026555 - 2026271 - | hypothetical protein TERM 2066 2026396 - 2026418 + g 71 -5.6 -4.58698 | opp_overlap 2026396 TCAGCTTATCTAAAG GTACGATATA AAC TTTGTCGTAC TTATTTTTGATTTGA SA1774 2027720 - 2026575 - | hypothetical protein SA1775 2028481 - 2027744 - | hypothetical protein SA1776 2029652 - 2028465 - | hypothetical protein SA1777 2031329 - 2029668 - | hypothetical protein TERM 2067 2030918 - 2030929 + g 73 -4.4 -4.92777 | AAACGGTTCTGATTT CATC AAAC GATG TTTTTGCTTGATCTT SA1778 2031670 - 2031326 - | hypothetical protein SA1779 2032101 - 2031802 - | hypothetical protein TERM 2068 2032231 - 2032209 - R 89 -7 -5.38054 | CCTCATAAATAAAAA GACACATCAC ATA GTAATGCGCC TCTTGTTCATGCGTC SA1780 2032749 - 2032333 - | hypothetical protein SA1781 2032980 - 2032777 - | hypothetical protein SAS062 2033126 - 2032977 - | hypothetical protein SA1782 2033329 - 2033123 - | hypothetical protein SA1783 2033562 - 2033326 - | hypothetical protein SA1784 2034144 - 2033608 - | hypothetical protein SA1785 2034389 - 2034141 - | hypothetical protein SA1786 2034649 - 2034401 - | hypothetical protein SA1787 2034903 - 2034646 - | hypothetical protein SA1788 2035274 - 2034903 - | hypothetical protein SA1789 2035691 - 2035287 - | hypothetical protein SA1790 2035918 - 2035700 - | hypothetical protein SA1791 2036818 - 2035925 - | hypothetical protein SA1792 2037318 - 2036848 - | single-strand DNA-binding protein TERM 2069 2037251 - 2037263 + g 73 -7.7 -3.86312 | GATGCTACATTTACA CCACT TTG AGTGG TTCTTAATTCTGGGT TERM 2070 2037350 - 2037339 - R 77 -7.2 -4.20025 | opp_overlap 2037339 AACCTCCAACATAAA CGGG CGCG CCCG TCACTTTTTGTATTT SA1793 2037804 - 2037319 - | hypothetical protein TERM 2071 2037915 - 2037930 + r 71 -4.8 -4.72497 | TATATTTGAAATGCT TTTGAA CACG TTCAAA TTTTATTCCTGCCTC SA1794 2038937 - 2038017 - | hypothetical protein TERM 2072 2038753 - 2038769 + g 77 -5.1 -5.13521 | overlap 2038755 GTTGCAAATTCCAGC GCTGGTT TAT AACCATC TTTTTTAGATCCTTT TERM 2073 2038755 - 2038767 + g 71 -6.3 -4.1821 | overlap 2038753 TGCAAATTCCAGCGC TGGTT TAT AACCA TCTTTTTTAGATCCT SA1795 2040882 - 2038939 - | hypothetical protein TERM 2074 2039744 - 2039763 + g 77 -5 -5.10767 | TCTTTCGATTTGTTT GCATTGAA TTTC TGCAATGC TTTTTCTCTTACCTC SA1796 2041154 - 2040891 - | hypothetical protein SA1797 2041423 - 2041163 - | hypothetical protein SA1798 2041730 - 2041428 - | hypothetical protein TERM 2075 2041794 - 2041819 + r 100 -9.1 -5.95946 | CTTAAATGTTTGTTA CTGTTACTTGT TGGC GCAAGTAGCAG TTTTTTTATTCTTCA SAS063 2041986 - 2041825 - | hypothetical protein TERM 2076 2041955 - 2041967 + g 82 -7.7 -4.54477 | opp_overlap 2041948, overlap 2041946 GTGAAGCATAGTACT GCTAC TAG GTAGC TTTTATAAGTTTTAC SA1799 2042306 - 2041983 - | hypothetical protein SA1800 2042361 - 2042741 + | hypothetical protein SAS064 2042925 - 2042728 - | hypothetical protein TERM 2077 2042865 - 2042904 + g 90 -3.8 -5.79595 | gap 1 ATTGAATATTAACGG GTCGTCTATTACATTCT TCGTCAT AGTA-GTAATAGATGAC TTTTTTGTTTTGAGC SA1801 2043693 - 2042941 - | anti repressor SA1802 2043744 - 2044073 + | hypothetical protein SA1803 2044277 - 2044062 - | hypothetical protein TERM 2078 2044104 - 2044135 + g 86 -2.8 -5.89921 | overlap 2044110 TATTAAATCGTCTGC GCTAGGCTGCCACC TTCC GGCGGCGGTTTGTC TTTTTTTCTTATAGT TERM 2079 2044110 - 2044129 + g 83 -7 -4.74406 | overlap 2044104 ATCGTCTGCGCTAGG CTGCCACC TTCC GGCGGCGG TTTGTCTTTTTTTCT SA1804 2044556 - 2044293 - | transcriptional regulator TERM 2080 2044602 - 2044588 - H 71 -7.2 -3.73873 | opp_overlap 2044588 GTAAACCTAATATAA TACGAA ATT TTCGTA TTGTCAACATTAAAT SA1805 2044690 - 2045403 + | hypothetical protein SA1806 2045419 - 2046351 + | ATP-dependent helicase TERM 2081 2046382 - 2046370 - f 81 -3.5 -5.55664 | CGATGATCAAAAAAA TTTTT ACA AAAAA ACATGTATTCTTAGT TERM 2082 2046422 - 2046432 + F 78 -6.8 -4.57073 | opp_overlap 2046422 TGAAAACCATAATCA CAGC GAT GCTG TTTTTGGAAAAAGTA SA1807 2046902 - 2047084 + | hypothetical protein TERM 2083 2047149 - 2047135 - f 70 -8.5 -3.15699 | opp_overlap 2047135, overlap 2047133 ACGTATTGATTAATA GCGCC TATGT GGCGC TTTAATATATAAAGT TERM 2084 2047135 - 2047149 + F 79 -8.5 -3.88766 | opp_overlap 2047135 2047133 ACGTATTGATTAATA GCGCC TATGT GGCGC TTTAATATATAAAGT TERM 2085 2047615 - 2047631 + G 77 -3.1 -5.43621 | TGTAGCGAAAGCTGA TATTATT GAT AATAGTA TTTTTTATGCTTTAT SA1808 2047184 - 2048167 + | ss-1,3-N-acetylglucosaminyltransferase SA1809 2048178 - 2048420 + | hypothetical protein TERM 2086 2048432 - 2048448 + F 82 -8 -4.40692 | ATAATGCGAAATTTC GGGTAG CTCGC CTACCC TTATTATTTTTTGCC int 2048483 - 2049520 + | integrase hlb 2049532 - 2050401 + | truncated beta-hemplysin TERM 2087 2050415 - 2050453 + T 100 -18.4 -3.70919 | opp_overlap 2050417 2050420, overlap 2050417 2050420 AGTGCTCAACTAACT AATAACTCGCTTCGTTCT AAA AGGACGAAGCGAGTTATA TTGTTAAAATTTGAA TERM 2088 2050451 - 2050417 - T 100 -18.8 -3.45366 | opp_overlap 2050417 2050415 2050420, overlap 2050420 TGCTCAACTAACTAA TAACTCGCTTCGTTCT AAA AGGACGAAGCGAGTTA TATTGTTAAAATTTG TERM 2089 2050417 - 2050451 + T 100 -21 -3.4314 | opp_overlap 2050417 2050420, overlap 2050415 2050420 TGCTCAACTAACTAA TAACTCGCTTCGTTCT AAA AGGACGAAGCGAGTTA TATTGTTAAAATTTG TERM 2090 2050420 - 2050448 + T 100 -18.3 -3.8372 | opp_overlap 2050417 2050420, overlap 2050417 2050415 TCAACTAACTAATAA CTCGCTTCGTTCT AAA AGGACGAAGCGAG TTATATTGTTAAAAT TERM 2091 2050448 - 2050420 - T 100 -16.1 -3.86031 | opp_overlap 2050420 2050417 2050415, overlap 2050417 TCAACTAACTAATAA CTCGCTTCGTTCT AAA AGGACGAAGCGAG TTATATTGTTAAAAT TERM 2092 2050594 - 2050634 + T 100 -14.3 -3.72745 | opp_overlap 2050594 2050599, overlap 2050599 CTACTCAAATATAAA TAAAAGTTACCTACTACAT TCT ATGTAGCAGGCAACTTTTA TTACTTATTTCTTTT TERM 2093 2050634 - 2050594 - T 100 -18.7 -4.35044 | opp_overlap 2050594 2050599, overlap 2050599 CTACTCAAATATAAA TAAAAGTTACCTACTACAT TCT ATGTAGCAGGCAACTTTTA TTACTTATTTCTTTT TERM 2094 2050629 - 2050599 - T 100 -14.2 -5.13648 | opp_overlap 2050594 2050599, overlap 2050594 CAAATATAAATAAAA GTTACCTACTACAT TCT ATGTAGCAGGCAAC TTTTATTACTTATTT TERM 2095 2050599 - 2050629 + T 100 -9.8 -4.85618 | opp_overlap 2050599 2050594, overlap 2050594 CAAATATAAATAAAA GTTACCTACTACAT TCT ATGTAGCAGGCAAC TTTTATTACTTATTT SA1812 2051655 - 2050639 - | hypothetical protein SA1813 2052732 - 2051677 - | hypothetical protein SA1814 2053168 - 2054391 + | succinyl-diaminopimelate desuccinylase TERM 2096 2054400 - 2054429 + F 78 -4.3 -5.45652 | gap 1 GAAATAAGAACGATG CTGTCAGC-TGC CCTATTC GCGTGCTGGCAG TTTTTTATTGCGAAT TERM 2097 2054582 - 2054601 + F 81 -9.4 -3.6761 | opp_overlap 2054586, overlap 2054586 ATTGCATTGTCTATT GAAATTGG GAAT CCAATTTC TCTTTGTTGAGGCCC TERM 2098 2054665 - 2054684 + F 78 -9.3 -3.28979 | TTCGAAATTCTCTGT GTTGGGG CCCCCA CCCCAAC TTGCATTGTCTGTTG TERM 2099 2054699 - 2054718 + F 76 -9.4 -3.09273 | opp_overlap 2054703, overlap 2054703 CTTGCATTGTCTGTT GAAATTGG GAAT CCAATTTC TCTGTGTTGGGGCCC SA1815 2054835 - 2056142 + | hypothetical protein TERM 2100 2056196 - 2056225 + F 100 -11.7 -5.88476 | opp_overlap 2056203, overlap 2056203 TTAATCTATTACATT TAAAAAACTACCT AAAC AGGTAGTTTTTTG TTTTTTATTTATTTT TERM 2101 2056218 - 2056203 - f 90 -7.6 -5.13473 | opp_overlap 2056196 2056203 ATTACATTTAAAAAA CTACCT AAAC AGGTAG TTTTTTGTTTTTTAT TERM 2102 2056203 - 2056218 + F 100 -7.6 -6.07374 | opp_overlap 2056203, overlap 2056196 ATTACATTTAAAAAA CTACCT AAAC AGGTAG TTTTTTGTTTTTTAT TERM 2103 2056584 - 2056546 - f 82 -5.3 -5.39721 | opp_overlap 2056546 TTAGCACATAAAAAA GACGCCTCTCATAAGTT TAGTC AACTAATGGAAGGTGTC TTAAATTAAAATATT TERM 2104 2057180 - 2057193 + G 70 -3.9 -5.00234 | AAAAGATTATTATTT GTAAT TGTT ATTAC TTTATTTATTTTTTC sel 2057159 - 2057881 + | extracellular enterotoxin L TERM 2105 2057919 - 2057947 + T 100 -11.2 -3.92267 | gap 1, opp_overlap 2057919 TCACTGTATAAATAA CCGCACTTTCTAT TAAT ATAGAA-GTGCGG TTTAATCTATATATA TERM 2106 2057947 - 2057919 - T 100 -11.2 -4.07877 | gap 1, opp_overlap 2057919 TCACTGTATAAATAA CCGCACTTTCTAT TAAT ATAGAA-GTGCGG TTTAATCTATATATA TERM 2107 2057999 - 2057978 - T 81 -7.3 -4.62783 | opp_overlap 2057978 TATGCATCCTAAAAA GGCAAGCAC CGAA GTACTTACC TTTCAAATATATCTA sec3 2058850 - 2058050 - | enterotoxin typeC3 TERM 2108 2059374 - 2059349 - H 100 -14.9 -3.95786 | opp_overlap 2059356 ATAGAGATATAATAA TAGGCAAGTAC CGAA GTACTTGCCTA AATATCAACAAGATT TERM 2109 2059435 - 2059418 - H 90 -7.7 -5.33026 | TAATGGAAATAAAAA GTCAGCC CGAA GGCTAAC TTACGAATAGATGAA SA1818 2059637 - 2060197 + | hypothetical protein TERM 2110 2060208 - 2060228 + F 93 -8.3 -5.07652 | AATAACTTTTTTCGA GAGGCAG ATTACTC CTGCCTC TTTTCTTTTGAACAG tst 2061076 - 2061780 + | toxic shock syndrome toxin-1 SA1820 2062504 - 2061935 - | hypothetical protein SA1821 2062842 - 2062501 - | hypothetical protein SA1822 2063372 - 2062845 - | hypothetical protein TERM 2111 2063414 - 2063394 - R 74 -9 -3.33798 | opp_overlap 2063413 ACCCCTATAAACAGA GCCTACCC GAATT GGATAGGC AATCATTGCTATTTA SA1823 2063641 - 2063423 - | hypothetical protein SA1824 2064237 - 2063659 - | hypothetical protein SA1825 2064590 - 2064249 - | hypothetical protein SA1826 2065681 - 2065040 - | hypothetical protein TERM 2112 2065592 - 2065580 - G 73 -7.7 -3.80893 | opp_overlap 2065579 ATTGTATAACTTAAA GCAAC ACG GTTGC ACTTTACTATGTTCT SA1827 2066058 - 2065678 - | hypothetical protein SA1828 2068077 - 2066368 - | hypothetical protein SA1829 2068960 - 2068091 - | hypothetical protein SA1830 2069351 - 2069025 - | hypothetical protein TERM 2113 2069053 - 2069090 + g 74 -3.4 -5.22289 | TTTATTGAATTCTTT GCGTCATCTGATTCCT CGCCAA AGTTCTCAGATGATGC TTTTTCTATTTCATA SA1831 2069563 - 2069354 - | hypothetical protein SA1832 2070016 - 2069699 - | hypothetical protein SA1833 2070239 - 2070021 - | hypothetical protein TERM 2114 2070940 - 2070926 - g 79 -3.6 -5.47218 | TGTTATTTAAAAAAA TTAACC AAA AGTTAA GTGGGTATGTTTCTG SA1834 2070412 - 2071086 + | hypothetical protein TERM 2115 2072254 - 2072216 - g 100 -12.6 -5.38951 | AACTCATACAAAAAA GACGCTTCCCAAAAGTTT AGT AAACTCATGGAAAACGTC TCAAAAGATTTATTT int 2071100 - 2072272 + | hypothetical protein groEL 2073957 - 2072341 - | chaperonin GroEL TERM 2116 2072428 - 2072451 + g 75 -9 -3.44051 | gap 1, opp_overlap 2072428 2072431, overlap 2072431 2072435 TTCAGTCGTTAAGAA CATTGCTGCAA CAC TTGCAGC-ATG TTGTAATGCTGAGCG TERM 2117 2072451 - 2072428 - G 77 -9 -3.62597 | gap 1, opp_overlap 2072428 2072431 2072435, overlap 2072431 TTCAGTCGTTAAGAA CATTGCTGCAA CAC TTGCAGC-ATG TTGTAATGCTGAGCG TERM 2118 2072449 - 2072431 - G 84 -11.8 -2.63252 | opp_overlap 2072428 2072431 2072435, overlap 2072428 AGTCGTTAAGAACAT TGCTGCAA CAC TTGCAGCA TGTTGTAATGCTGAG TERM 2119 2072431 - 2072449 + g 89 -11.8 -3.29273 | opp_overlap 2072431 2072428, overlap 2072428 2072435 AGTCGTTAAGAACAT TGCTGCAA CAC TTGCAGCA TGTTGTAATGCTGAG TERM 2120 2073508 - 2073535 + g 76 -2.7 -5.46706 | opp_overlap 2073514, overlap 2073514 TTCTTCATCTGCTGC TGAAATCGCAC CTACTT GCGCTATTTCA TTTTTATTTTCAACT groES 2074317 - 2074033 - | co-chaperonin GroES TERM 2121 2074643 - 2074663 + G 84 -8.3 -4.5287 | AACTTGTTCTATTTT TAATCGCCG CCA CGACGATTA TTTTAATTAATTTAA SA1838 2074492 - 2075235 + | hypothetical protein TERM 2122 2075278 - 2075245 - T 88 -5.5 -5.5208 | gap 2, opp_overlap 2075245 CCATAATATAAAAAA CGAATCACA-C-ACG GATTAT CGTCGCTGTGATTCG TTTTTATTTTTCTTT TERM 2123 2075245 - 2075278 + T 95 -6.2 -5.77734 | gap 2, opp_overlap 2075245 CCATAATATAAAAAA CGAATCACA-C-ACGG ATTA TCGTCGCTGTGATTCG TTTTTATTTTTCTTT SA1839 2076507 - 2075260 - | hypothetical protein TERM 2124 2075636 - 2075647 + g 71 -3 -5.09259 | CCATTTAAATATGCA TTTC CGCT GAAA TTTTGTTTTCGAATA TERM 2125 2076077 - 2076100 + g 79 -8.2 -3.90943 | overlap 2076078 TTTGGTTTCGGGTTA TCTGGATCTG GTTT TGGATCCAGA TTTGGCTTTGGTTTA TERM 2126 2076999 - 2076987 - g 74 -2 -5.5074 | CAACTGAACAAAAAA TTGA TAACT TCAA ACATTCATACGGTAC SA1840 2076704 - 2077330 + | hypothetical protein TERM 2127 2077459 - 2077439 - f 93 -11.3 -3.4691 | opp_overlap 2077443 ACTTAAGAATAGGAA TACATGAGT AAA ACTCATGTA TAAGAAATACTAATT TERM 2128 2077531 - 2077550 + F 76 -9.4 -3.09273 | opp_overlap 2077535, overlap 2077535 CTTGCATTGTCTGTA GAAATTGG TGTT CCAATTTC TCTATGTTGGGGCCC SA1841 2077691 - 2078476 + | hypothetical protein TERM 2129 2078513 - 2078554 + T 100 -14.9 -5.67063 | opp_overlap 2078517 AACACATGTCATGAC TAAACATAGATTTATGAGA GATT TTTCATAAGTCTATGTTTA TTTTTTTATAATAGA TERM 2130 2078757 - 2078729 - T 90 -7.4 -5.58179 | overlap 2078701 TATTACAATAAAAAA GGCCGCGAGC TTGGGAGGG GCTCACGACC ATACTTATTATTAAG hld 2079210 - 2079076 - | delta-hemolysin TERM 2131 2079256 - 2079266 + H 72 -5.4 -4.69559 | opp_overlap 2079256 2079254 AGTTATATTAAAACA TGCT AAA AGCA TTTATTTTCCAATTT TERM 2132 2079690 - 2079710 + G 75 -7 -4.26792 | overlap 2079678 ATGCAAAGTCTTCGA TACTTTGT TACAT ACAAAGTA TTTTAACATTTGTAT agrB 2079446 - 2080009 + | accessory gene regulator B agrD 2080012 - 2080155 + | AgrD protein TERM 2133 2080292 - 2080319 + F 81 -6.4 -5.1485 | opp_overlap 2080296, overlap 2080294 AAGGGATTATTTTAT TATAGTTGGAAT TATA ATTCCAACCATG TTTTTGTATTACTTC TERM 2134 2080294 - 2080317 + F 72 -6.8 -4.18115 | opp_overlap 2080296, overlap 2080292 GGGATTATTTTATTA TAGTTGGAAT TATA ATTCCAACCA TGTTTTTGTATTACT TERM 2135 2080315 - 2080296 - f 74 -9.4 -2.80113 | opp_overlap 2080294 2080292 GATTATTTTATTATA GTTGGAAT TATA ATTCCAAC CATGTTTTTGTATTA TERM 2136 2080652 - 2080664 + G 95 -6.3 -5.90231 | TTCATTCGTATTATT TGCAA CAT TTGCA TTTTTTTATATTTAT agrC 2080353 - 2081468 + | accessory gene regulator C agrA 2081487 - 2082203 + | accessory gene regulator A SA1845 2083531 - 2082572 - | hypothetical protein TERM 2137 2082765 - 2082781 + g 74 -6.5 -4.3208 | AAAGCATCCCCTGCC CCAGTTG TAT CAACAGG TTTTACCTTATAGCC scrB 2085012 - 2083528 - | sucrose-6-phosphate hydrolase scrR 2086111 - 2085161 - | sucrose operon repressor TERM 2138 2086269 - 2086234 - R 75 -5.6 -4.77165 | gap 1 TTTTGTATAACAAAA TGTCCCAACA-TCAACC TTT AGTTAAATGTCAGGACA ATGAATATTCTATGT nrgA 2087544 - 2086294 - | probabale ammonium transporter TERM 2139 2086537 - 2086548 + g 70 -2.2 -5.37593 | opp_overlap 2086525 AAAGCCATTCTCAAT GTCA GGAT TGGC TTTTTTACTTTGGAA SA1849 2087976 - 2087752 - | hypothetical protein SA1850 2089115 - 2088036 - | hypothetical protein TERM 2140 2089361 - 2089337 - R 81 -5.7 -5.18995 | opp_overlap 2089351 AACATAACAGAAAAA GCCTGAGAC ATACTTA GTCCCAGAC TGTTCTATAATTAAT SA1851 2090054 - 2089419 - | redox-sensing transcriptional repressor Rex TERM 2141 2091778 - 2091757 - g 77 -5.9 -4.70515 | opp_overlap 2091757, overlap 2091771 TAGATTCAAAAGAAA TGTTAGAGC AAGC ACTCCAACA TTTTGAAGGAACAAT vga 2090307 - 2092235 + | ABC transporter ATP-binding protein TERM 2142 2092245 - 2092279 + F 100 -9.6 -5.4477 | opp_overlap 2092243 2092241 2092245 2092248 CTATAAAAATATACA TAACTCTAACTGTA AATTCGC TATAGTTAGAGTTA TTTTTTTACAAATTT TERM 2143 2092279 - 2092245 - f 72 -8.1 -3.37205 | opp_overlap 2092245, overlap 2092243 2092241 2092248 CTATAAAAATATACA TAACTCTAACTGTAA ATTCG CTATAGTTAGAGTTA TTTTTTTACAAATTT TERM 2144 2093781 - 2093808 + G 70 -8.4 -3.2963 | ACCTGGAATTGTGTT CACGTCAATGGC AAAT GCCGATGATGTG TTATCAGGCGATAGT SA1853 2092597 - 2094207 + | hypothetical protein TERM 2145 2094238 - 2094215 - T 70 -9 -2.52635 | opp_overlap 2094228, overlap 2094214 2094228 ATGGTTAGCATGAAT CTTGAACATC AATC AATGTTCAAG TCGCAACATTGTTAT SA1854 2095547 - 2094522 - | O-sialoglycoprotein endopeptidase SA1855 2096004 - 2095540 - | hypothetical protein SA1856 2096666 - 2095977 - | hypothetical protein SA1857 2097081 - 2096620 - | hypothetical protein TERM 2146 2097417 - 2097462 + H 70 -5.8 -4.35044 | gap 2, overlap 2097457 TTTTATTATACTCTT TAGGACTCGAA-CG-TTAGTAA ATAT TTACTAAACGCTTTAAGTCCTA TTTCTGTTTGAATGG TERM 2147 2097488 - 2097508 + H 100 -14.1 -5.9362 | opp_overlap 2097488, overlap 2097474 AATGGGACTTGTAAA CGTCCCAAT AAT ATTGGGACG TTTTTTTATGTTTTA TERM 2148 2097508 - 2097488 - H 100 -14.1 -3.5764 | opp_overlap 2097474 2097488 AATGGGACTTGTAAA CGTCCCAAT AAT ATTGGGACG TTTTTTTATGTTTTA ilvD 2097592 - 2099280 + | dihydroxy-acid dehydratase ilvB 2099308 - 2101077 + | acetolactate synthase large subunit TERM 2149 2101293 - 2101269 - g 76 -3.7 -5.31059 | overlap 2101257 ATATTAATTAAAAAA TTAAAACAACA AAT TAATGTTTTAA CGGTTGAATGCTACG SA1860 2101077 - 2101331 + | acetolactate synthase 1 regulatory subunit TERM 2150 2102100 - 2102084 - g 73 -8.1 -3.54408 | opp_overlap 2102081 GTGTATCGAAATTAA TTCAAAG TGG CTTTGAA ACATTAGTAGAAGCG ilvC 2101468 - 2102472 + | ketol-acid reductoisomerase TERM 2151 2103616 - 2103606 - g 77 -5.4 -4.96501 | overlap 2103602 GCGGACAAAAAGAAA TCTG TTT CAGA TAGAGATATTCATGC leuA 2102502 - 2104031 + | 2-isopropylmalate synthase TERM 2152 2104175 - 2104146 - g 79 -8.7 -3.84514 | gap 1, opp_overlap 2104146, overlap 2104150 ACTTTAATTATCAAA TAGA-GCACCACGA ATT TGGTGGTGCCTCTA TTGATACATTCGGCG TERM 2153 2104146 - 2104175 + G 73 -8.7 -3.21912 | gap 1, opp_overlap 2104146 2104150 ACTTTAATTATCAAA TAGA-GCACCACGA ATT TGGTGGTGCCTCTA TTGATACATTCGGCG TERM 2154 2104170 - 2104150 - g 79 -9.7 -3.32233 | opp_overlap 2104146, overlap 2104146 TAATTATCAAATAGA GCACCACGA ATT TGGTGGTGC CTCTATTGATACATT leuB 2104034 - 2105080 + | 3-isopropylmalate dehydrogenase leuC 2105094 - 2106464 + | isopropylmalate isomerase large subunit leuD 2106465 - 2107037 + | isopropylmalate isomerase small subunit ilvA 2107052 - 2108320 + | threonine dehydratase TERM 2155 2108336 - 2108378 + T 90 -7.9 -5.25772 | opp_overlap 2108337, overlap 2108337 CACATAGTAAGAAAA ACAGTCATAAATTGATTTC TAATT GAAATCATCTTATGACTGC TTTTTATTATACTTT TERM 2156 2108377 - 2108337 - T 100 -13.6 -5.17744 | opp_overlap 2108336 2108337 ACATAGTAAGAAAAA CAGTCATAAATTGATTTC TAATT GAAATCATCTTATGACTG CTTTTTATTATACTT TERM 2157 2108337 - 2108377 + T 95 -11.4 -3.73023 | opp_overlap 2108337, overlap 2108336 ACATAGTAAGAAAAA CAGTCATAAATTGATTTC TAATT GAAATCATCTTATGACTG CTTTTTATTATACTT TERM 2158 2108504 - 2108489 - T 100 -9 -5.76633 | TTAGACATAAAAAAA GAGACC TTGC GGTCTC AATGCGGCTCATCGC TERM 2159 2108781 - 2108766 - T 100 -9 -5.76633 | TTAGACATAAAAAAA GAGACC TTGC GGTCTC AACTTGCCTGGCAAC TERM 2160 2109037 - 2109023 - T 100 -10 -6.06529 | TAGACATAAAAAAAA GAGACC TGC GGTCTC AACTTGCCTGGCAAC TERM 2161 2111858 - 2111877 + T 90 -10.8 -3.66803 | opp_overlap 2111857 2111856 GAGTGTCCTACAACC CCAACAAG CAAG CTTGTTGG TTTGGGCTCTTCCCG TERM 2162 2112234 - 2112261 + T 70 -5.6 -4.28115 | AACGCGTTATTAATC TTGTGAGTGTTC TTTC GAACACTAGCGA TTATTTCTTATGAAT TERM 2163 2112560 - 2112533 - T 73 -3.7 -5.27477 | gap 1, overlap 2112535 2112552 2112554 ACTTTAACCAAAAAA TATTTGAATGTT AAATA AACATTCAAA-A CTGAATACAATATGT TERM 2164 2112559 - 2112535 - T 84 -8.8 -4.26777 | overlap 2112533 2112552 2112554 TTTAACCAAAAAATA TTTGAATGTT AAATA AACATTCAAA ACTGAATACAATATG TERM 2165 2113540 - 2113558 + T 71 -8.8 -2.75963 | overlap 2113539 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT TERM 2166 2113971 - 2113992 + T 83 -10.3 -3.25079 | overlap 2113968 AAGACCGTCTTTTAC TTTTGAACC ATGC GGTTCAAAA TATTATCCGGTATTA TERM 2167 2114217 - 2114233 + T 73 -5.9 -4.66833 | overlap 2114218 ATACTAAATAATGTT TGTAACT TAT AGTTACG TTTTTGGAATTAACG TERM 2168 2114324 - 2114344 + T 70 -6.1 -4.19506 | opp_overlap 2114324 2114326 GAATCGAACCCACAA CATCAGCTT GGA AGGCTGAGG TTTTGCCATTAAACT TERM 2169 2114973 - 2114936 - T 83 -7.8 -4.59069 | gap 1, opp_overlap 2114936 ATCATAAGTAGAAAA GCCGAGATTG-CGAAGT ATTAA ATTACGACAATCTCGGC TTTAAACATTTTATA TERM 2170 2114936 - 2114973 + T 83 -10 -3.67737 | gap 1, opp_overlap 2114936 ATCATAAGTAGAAAA GCCGAGATTG-CGAAGT ATTAA ATTACGACAATCTCGGC TTTAAACATTTTATA SA1867 2115573 - 2115118 - | hypothetical protein SA1868 2117716 - 2115566 - | hypothetical protein TERM 2171 2118103 - 2118070 - R 79 -5.5 -5.04222 | gap 1 TAATTAAATTAAAAA TACCCCTCGATT-TCA ATT TAATAATCAAGGGATA ATTATATGGATTTTT sigB 2118920 - 2118150 - | RNA polymerase sigma factor SigB rsbW 2119374 - 2118895 - | serine-protein kinase RsbW TERM 2172 2119170 - 2119189 + gr 76 -4.4 -5.05113 | TTTCAAAATATATGT TAATAATG CCCA CATTGTTA TTTTCTTTGTATGCA rsbV 2119702 - 2119376 - | anti-sigmaB factor antagonist rsbU 2120822 - 2119821 - | sigmaB regulation protein RsbU TERM 2173 2119926 - 2119937 + g 74 -3 -5.27399 | AATATCTTGTGGGTG CATA TGTT TATG TTTTTTAATATATTC TERM 2174 2120988 - 2120967 - R 91 -5.3 -5.86332 | gap 1 TTAAGCTAAAAAAAA CTTTAGG-AT GGA ATACCTAAAG CCTAAAAAACTTAAG TERM 2175 2121037 - 2121025 - R 85 -4.9 -5.55769 | TTTTATAATAAAAAA TATGA ATA TCATA ACTGGTATTTGCTAA SA1873 2121534 - 2121172 - | hypothetical protein TERM 2176 2121384 - 2121424 + g 71 -7.9 -3.68324 | gap 1, opp_overlap 2121387, overlap 2121381 2121387 GTATTTTCGCTTTAT TAATCCTACCAGTTATTG CCGCAA CAATAACTG-TAGGACTA TATTTATTACCAGTA TERM 2177 2121421 - 2121387 - G 80 -10.3 -3.14132 | gap 1, opp_overlap 2121384 2121381 2121387 TTTTCGCTTTATTAA TCCTACCAGTTATTGC CGCA ACAATAACT-GTAGGA CTATATTTATTACCA TERM 2178 2121387 - 2121421 + g 75 -9.6 -2.64561 | gap 1, opp_overlap 2121387, overlap 2121384 2121381 TTTTCGCTTTATTAA TCCTACCAGTTATTG CCGCAA CAATAACTG-TAGGA CTATATTTATTACCA SAS067 2121701 - 2121531 - | hypothetical protein alr 2122934 - 2121786 - | alanine racemase dpj 2123359 - 2123000 - | holo-ACP synthase SA1876 2123854 - 2123363 - | hypothetical protein SA1877 2125424 - 2123841 - | hypothetical protein TERM 2179 2125330 - 2125315 - G 74 -6.2 -4.48987 | TTCGTATAATCAAAA TCTTTC AATT GAAAGA TAATGAAAATAAAAA SA1878 2125896 - 2125417 - | hypothetical protein TERM 2180 2126091 - 2126059 - R 73 -5.8 -4.62471 | gap 1, opp_overlap 2126086 TTGAATTGCTAAAAA GACACCATGTT-ATA ATTT TATCAACATGATGCC TTTCATCTATAATCA kdpC 2126664 - 2126104 - | potassium-transporting ATPase C chain kdpB 2128711 - 2126684 - | potassium-transporting ATPase B chain TERM 2181 2127414 - 2127400 - G 74 -6.4 -4.42062 | opp_overlap 2127413, overlap 2127404 CATCTTTTAAATAAA TCACGC CAA GCATGA CATTGTTTTCAATGA TERM 2182 2127931 - 2127915 - G 74 -6.5 -4.30987 | opp_overlap 2127915 ATCGCCGATAACAAA CCACCGA TTG TCGTTGG TATTAAACATACTGT kdpA 2130406 - 2128730 - | potassium-transporting ATPase subunit A kdpD 2130678 - 2133335 + | sensor protein KdpD kdpE 2133335 - 2134030 + | KDP operon transcriptional regulatory protein KdpE TERM 2183 2134077 - 2134043 - T 93 -5.7 -5.72053 | opp_overlap 2134043 TAATTAAATAAAAAA GATCGCTGCCATTAA ACGAA TGATTGGCAGTGATC TTTTTTATATTCAAC TERM 2184 2134043 - 2134077 + T 95 -7.9 -5.47159 | opp_overlap 2134043 TAATTAAATAAAAAA GATCGCTGCCATTAA ACGAA TGATTGGCAGTGATC TTTTTTATATTCAAC TERM 2185 2134417 - 2134447 + T 72 -4.7 -4.9041 | gap 1 GAGTTTTTATTATTA GGCGGCC-AGTCCA TTAT TGGGCTTGGTTGTC TTCTTTTTTTCTCCT tnp 2135733 - 2134414 - | transposase TERM 2186 2135834 - 2135813 - R 82 -4.4 -5.52384 | overlap 2135816 TGTGTATTAAAAAAA GCAGGAAG TTTTAC CTTCCCAC CATAAAAGATGAAGA TERM 2187 2135889 - 2135862 - R 76 -2.8 -5.57396 | gap 1 AGAACCAACAAAAAA GAGCTCAA-GACA TTA CATCTTTAAGCTC TTAATCTATAAATTA SA1885 2137422 - 2135902 - | hypothetical protein TERM 2188 2136804 - 2136818 + g 70 -3.6 -4.84363 | CAGACATTTCATTAT TCATTG TCT TAATGA TTTTTGGTGATTTCA TERM 2189 2137143 - 2137125 - G 73 -7.4 -3.82205 | CGAATACAGTAACAA CTTGGACA CCT TGTCCACG GCTAAATTCTCTTAA TERM 2190 2137871 - 2137842 - R 91 -5.1 -5.71295 | ACATAAAAAGAAAAA GGCAATTTTGTAT TTAC ACACAAAACCACC TCTTCTTTGTAATCT murF 2139297 - 2137939 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase ddl 2140382 - 2139312 - | D-alanyl-alanine synthetase A SA1888 2140700 - 2141902 + | hypothetical protein TERM 2191 2142058 - 2142013 - T 100 -14.3 -4.03219 | opp_overlap 2142013 ACTCGATAATAACAA TCCCTCTTTGAAGTACACATT GTAA AATGTACACTCTAAAGAGGGA TTTTGTTATATAGTA TERM 2192 2142013 - 2142058 + T 100 -9.9 -4.85918 | opp_overlap 2142013 ACTCGATAATAACAA TCCCTCTTTGAAGTACACATT GTAA AATGTACACTCTAAAGAGGGA TTTTGTTATATAGTA TERM 2193 2142107 - 2142133 + T 72 -8 -3.60234 | opp_overlap 2142107 AATCCAGTCAAAAAA GCTATCATCGAA TAG TCCGACGATAGC TTTAACGGTGTGTGA TERM 2194 2142133 - 2142107 - T 100 -12.4 -5.10497 | opp_overlap 2142107 AATCCAGTCAAAAAA GCTATCATCGAA TAG TCCGACGATAGC TTTAACGGTGTGTGA SAS068 2142303 - 2142166 - | hypothetical protein TERM 2195 2142219 - 2142233 + g 80 -2.9 -5.63374 | AAGTATTAATAATGT CTAAA CGAGA TTTAG TTTTTTTAATATTCA SA1889 2142640 - 2142431 - | hypothetical protein SA1890 2142945 - 2142652 - | hypothetical protein TERM 2196 2143006 - 2143016 + H 70 -5.4 -4.60041 | AAAACACAACGTCAA CACA AAG TGTG TTTTTCAAACTAAAT TERM 2197 2143419 - 2143407 - g 75 -4.9 -5.00884 | AGCTGCTTTAAAAAA TGAAA ACT TTTCA AATTCCAATTATCAA SA1891 2143111 - 2144595 + | hypothetical protein SA1892 2144623 - 2145270 + | hypothetical protein TERM 2198 2145961 - 2145907 - T 100 -17.7 -3.63782 | gap 1, opp_overlap 2145907 2145913, overlap 2145897 2145913 TAATATTATTTCAAA TAAAAACAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTGTTTCTA TTTATCACATATTGT TERM 2199 2145907 - 2145961 + T 100 -17.7 -3.93004 | gap 1, opp_overlap 2145897 2145907 2145913, overlap 2145913 TAATATTATTTCAAA TAAAAACAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTGTTTCTA TTTATCACATATTGT TERM 2200 2145955 - 2145913 - T 100 -14.5 -5.28942 | gap 1, opp_overlap 2145907 2145913, overlap 2145907 TATTTCAAATAAAAA CAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTG TTTCTATTTATCACA TERM 2201 2145913 - 2145955 + T 100 -16.7 -4.40003 | gap 1, opp_overlap 2145913 2145907, overlap 2145907 TATTTCAAATAAAAA CAGCAGTAGGATGACTTTCA CATT TGAAA-TCATCTTACTGCTG TTTCTATTTATCACA TERM 2202 2146066 - 2146014 - T 100 -14.6 -4.75174 | gap 1, opp_overlap 2146014 2146017 TATTGAAGCGAAAAA TAATGTGCGCCCTATAAAGTTAAAA TTAT CTTCAACTTT-TAGGGTGCACATTA TTTGGACTTGCTAAG TERM 2203 2146014 - 2146066 + T 100 -13.9 -3.67976 | gap 1, opp_overlap 2146014, overlap 2146017 TATTGAAGCGAAAAA TAATGTGCGCCCTATAAAGTTAAA ATTATC TTCAACTTT-TAGGGTGCACATTA TTTGGACTTGCTAAG TERM 2204 2146017 - 2146063 + T 100 -11.2 -3.97019 | gap 1, opp_overlap 2146014, overlap 2146014 TGAAGCGAAAAATAA TGTGCGCCCTATAAAGTTAAA ATTATC TTCAACTTT-TAGGGTGCACA TTATTTGGACTTGCT SA1893 2146955 - 2146083 - | lipoprotein precursor TERM 2205 2146606 - 2146618 + g 85 -4.1 -5.68489 | ACTTGCATTAATTCT TGGTT TGC AGCCA TTTTTTCTTCTTGTG thiE 2147682 - 2147041 - | chain B, thiamin phosphate synthase thiM 2148475 - 2147684 - | hydroxyethylthiazole kinase thiD 2149289 - 2148459 - | phosphomethylpyrimidine kinase SA1897 2149971 - 2149282 - | hypothetical protein TERM 2206 2150020 - 2150000 - R 100 -9.1 -5.95539 | opp_overlap 2150000 CCCTAAATAAAAAAA CTACTTCCA ACA TGAAAGTAG TTTGATGGCAATGTT TERM 2207 2150313 - 2150275 - R 100 -16.2 -5.63517 | opp_overlap 2150285 TTGCGAAATAAAAAA GACCGGAACATATCGAGA ATT CCCCGATATATTCCGATC TAAAAGTTACTTATA SA1898 2151053 - 2150358 - | hypothetical protein TERM 2208 2150443 - 2150453 + g 74 -6.8 -4.32857 | TCAGGAGCATTTGCT GGTG ATA CACC TTTATATTTAGCAGG TERM 2209 2151353 - 2151317 - R 75 -4.5 -5.07941 | overlap 2151319 AAAACTACACAAAAA GACGACCTACACAAC AGTACTA GTCATGTAAGTCGTT TTTAATTGAGTATAT TERM 2210 2151351 - 2151319 - R 75 -7.1 -4.13652 | overlap 2151317 AACTACACAAAAAGA CGACCTACACAAC AGTACTA GTCATGTAAGTCG TTTTTAATTGAGTAT SA1899 2151837 - 2151442 - | hypothetical protein TERM 2211 2151744 - 2151764 + g 77 -5.5 -5.01497 | TATAATTTCGGTGCG TTGCAAC ACAAAAC GTTGCAA TTTTTCTATCCTCCT SA1900 2152031 - 2152471 + | hypothetical protein TERM 2212 2152481 - 2152518 + T 100 -3.1 -6.37666 | gap 2, opp_overlap 2152481 GAGTAAAATAAAAAA CATTCAAAGA-TT-ATG CCAACA CATTAAATCTTTGAATG TTTTTTTTGTTTTAT TERM 2213 2152518 - 2152481 - T 87 -3.8 -5.83211 | gap 2, opp_overlap 2152481 GAGTAAAATAAAAAA CATTCAAAGA-TT-ATGC CAAC ACATTAAATCTTTGAATG TTTTTTTTGTTTTAT SA1901 2152970 - 2152530 - | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase murA 2154269 - 2153004 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SA1903 2154613 - 2154380 - | hypothetical protein TERM 2214 2154982 - 2155002 + r 93 -11.3 -3.61527 | opp_overlap 2154986 AATTAGTATTTCTTA TACATGAGT TTT ACTCATGTA TTCCTATTTTTAAAT TERM 2215 2155166 - 2155135 - R 100 -18.2 -5.20154 | opp_overlap 2155135 ATATAATTCAAAAAA GGGTCGAAGATATG AAAT CACATCTTCGACCC TTTATTTACTATTTT TERM 2216 2155135 - 2155166 + r 100 -16 -4.60648 | opp_overlap 2155135 ATATAATTCAAAAAA GGGTCGAAGATATG AAAT CACATCTTCGACCC TTTATTTACTATTTT atpC 2155579 - 2155175 - | F0F1 ATP synthase subunit epsilon atpD 2157011 - 2155599 - | F0F1 ATP synthase subunit beta atpG 2157899 - 2157033 - | F0F1 ATP synthase subunit gamma TERM 2217 2157744 - 2157754 + g 71 -5.4 -4.46155 | opp_overlap 2157744, overlap 2157735 TGCAACTGCAGTAAT TGCA TCT TGCA TTTTATCCATATATG atpA 2159438 - 2157930 - | F0F1 ATP synthase subunit alpha TERM 2218 2158692 - 2158673 - G 83 -8 -4.40993 | opp_overlap 2158672 2158675, overlap 2158691 CATAAACGATTAAAA CATGTTTA CCGT TAAACATG AATTCTTCACCCATT atpH 2159999 - 2159460 - | F0F1 ATP synthase subunit delta atpF 2160520 - 2159999 - | F0F1 ATP synthase subunit B atpE 2160930 - 2160718 - | F0F1 ATP synthase subunit C atpB 2161701 - 2160973 - | F0F1 ATP synthase subunit A SA1912 2162075 - 2161722 - | hypothetical protein mnaA 2163372 - 2162242 - | UDP-GlcNAc 2-epimerase TERM 2219 2162637 - 2162650 + g 73 -4.5 -4.91712 | TCTTTTGAGCCACCT CTCGA ACTT TCGGG TTTTTATGCATTGGA TERM 2220 2162964 - 2162991 + g 82 -8.6 -3.99806 | CACCAACTAATTGTC TATTCACCTCTT CTGG AAAAGGTGAATA TTTATCATAACTTCT upp 2164022 - 2163393 - | uracil phosphoribosyltransferase glyA 2165288 - 2164050 - | serine hydroxymethyltransferase SA1916 2165839 - 2165315 - | hypothetical protein TERM 2221 2165893 - 2165869 - R 100 -10.1 -5.93252 | opp_overlap 2165867 2165869 CCTAAAAATAAAAAA GGAATATAGCA AAG TGCTACACTCC TCTATTATAACTTAT SA1917 2166365 - 2165946 - | hypothetical protein SA1918 2167408 - 2166362 - | hypothetical protein TERM 2222 2167485 - 2167451 - R 70 -3.7 -5.08367 | gap 1 AATATAAAGCAAAAA GCTATGCACTTAACTA ATCA TAGCAAAG-GCATAAC TTCTAATTACCATTT SA1919 2168328 - 2167492 - | hypothetical protein TERM 2223 2168285 - 2168308 + g 79 -5.4 -5.04733 | opp_overlap 2168291 AACCCTTTTTGTTGT GTTAAATGAA TTGC TTCATCTAAC TTTTCTTTATAATTC prfA 2169391 - 2168315 - | peptide chain release factor 1 tdk 2169991 - 2169392 - | thymidine kinase TERM 2224 2170322 - 2170289 - R 95 -6.1 -5.72622 | gap 1 CTTATAAATAAAAAA GCTGTCTACAATTCCA TTA TAGGA-TGCAGACAGC TTAACGATTACTATA rpmE2 2170592 - 2170338 - | 50S ribosomal protein L31 type B rho 2172026 - 2170710 - | transcription termination factor Rho TERM 2225 2172246 - 2172202 - R 84 -8.8 -4.32233 | opp_overlap 2172208, overlap 2172203 2172208 ATAAAAATTGCAAAA TTAAAACAGTACACAAAACT TAATT AGTCATGTGCACTGTTTTAT TGCGATTTTTAATTC TERM 2226 2172245 - 2172203 - R 100 -12.3 -3.17713 | opp_overlap 2172208, overlap 2172202 2172208 TAAAAATTGCAAAAT TAAAACAGTACACAAAACT TAATT AGTCATGTGCACTGTTTTA TTGCGATTTTTAATT TERM 2227 2172240 - 2172208 - R 83 -7.8 -4.67641 | opp_overlap 2172208, overlap 2172203 2172202 ATTGCAAAATTAAAA CAGTACACAAAACT TAATT AGTCATGTGCACTG TTTTATTGCGATTTT SA1924 2173700 - 2172273 - | hypothetical protein TERM 2228 2173907 - 2173859 - R 100 -9.8 -5.27938 | ATTTTTAAATAAAAA TAACTATTCCCACATCATCGCA AATAA TGCGAAGACTTAGAAATAGTTA TAATCAATGCTATGT SA1925 2174276 - 2173938 - | hypothetical protein murZ 2175621 - 2174362 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 2229 2176010 - 2176035 + r 72 -6.2 -4.21098 | opp_overlap 2176010, overlap 2176013 ATACGACATAAAAAA GAAGCAAACA CCATTT TGTCTGCTTC TTTTAAAATTAATAT TERM 2230 2176035 - 2176010 - R 95 -8.4 -5.40625 | opp_overlap 2176010 2176013 ATACGACATAAAAAA GAAGCAAACA CCATTT TGTCTGCTTC TTTTAAAATTAATAT TERM 2231 2176094 - 2176076 - R 71 -4.7 -4.8143 | TTAATAACTTAAAAA CTAAATA TTAAT TATTTAG CGCGGTTTGAAGTAC fbaA 2176947 - 2176087 - | fructose-bisphosphate aldolase TERM 2232 2176569 - 2176600 + g 74 -5.3 -4.65916 | gap 1, opp_overlap 2176578 CACCTTTTTCATGAG CGTATTCAACAACT TTTTT AGTTGTTGC-TACG TTTTCTTCGAATGGG TERM 2233 2176790 - 2176772 - G 73 -7.4 -3.88137 | ACAATTGTGTAGAAA CCGCTCAT GTA ACGAGCAG CACCTTCAGAAACAC SA1928 2177165 - 2177686 + | hypothetical protein TERM 2234 2177735 - 2177793 + T 85 -7.1 -4.93079 | gap 2, opp_overlap 2177746, overlap 2177746 ACATAATATTAAAAT TATAC-GA-AAAACCGGTACTTTCAATGT TTA ACAATGAAAGTACCGGTTTTATTAGCAAA TTTATTTATTTTGTT TERM 2235 2177746 - 2177780 + T 100 -18.8 -4.64334 | opp_overlap 2177746, overlap 2177735 AAATTATACGAAAAA CCGGTACTTTCAATGT TTA ACAATGAAAGTACCGG TTTTATTAGCAAATT TERM 2236 2177780 - 2177746 - T 100 -18.8 -4.85177 | opp_overlap 2177735 2177746 AAATTATACGAAAAA CCGGTACTTTCAATGT TTA ACAATGAAAGTACCGG TTTTATTAGCAAATT ctrA 2179405 - 2177795 - | CTP synthetase TERM 2237 2179660 - 2179629 - R 100 -12.4 -6.01187 | gap 1, opp_overlap 2179627 AATTAAATAAAAAAA CGCTCCCTCTCACAA ATT CTGTAAG-GGGAGCG TATAAATTTTATACA rpoE 2180271 - 2179741 - | DNA-directed RNA polymerase subunit delta SA1931 2181243 - 2180383 - | hypothetical protein SA1932 2181668 - 2182471 + | pantothenate kinase TERM 2238 2182472 - 2182528 + T 71 -5.6 -4.51378 | opp_overlap 2182477, overlap 2182477 2182479 TATTTAGGTAAATAG AAAAAGACCATTTATATGCGCG-TTGTT TTA AATAAACGC-TATATAAATGGCCTTTTA TTTTATGGTCTACGT TERM 2239 2182477 - 2182523 + T 81 -5.5 -5.20781 | opp_overlap 2182477, overlap 2182472 2182479 AGGTAAATAGAAAAA GACCATTTATATGCGCG-TTGTT TTA AATAAACGC-TATATAAATGGCC TTTTATTTTATGGTC TERM 2240 2182523 - 2182477 - T 81 -5.5 -5.20783 | opp_overlap 2182477 2182472 2182479 AGGTAAATAGAAAAA GACCATTTATAT-GCGCGTTGTT TTA AATAA-ACGCTATATAAATGGCC TTTTATTTTATGGTC SA1933 2183273 - 2182602 - | hypothetical protein TERM 2241 2183535 - 2183499 - R 87 -8.1 -4.71426 | opp_overlap 2183499 CCTTTATCAACAAAA TGGCAACTCTTATAACA TAG TGAAATAAAAGTCGCCA TTTAATATTAGTATT TERM 2242 2183616 - 2183604 - R 75 -4.1 -5.1925 | CTAGAATCGAAAAAA GCTTG TTA CAAAC GCATATTCAGTCAAC SA1934 2184865 - 2183672 - | hypothetical protein hmrA 2186049 - 2184865 - | hypothetical protein luxS 2186360 - 2186830 + | S-ribosylhomocysteinase TERM 2243 2186904 - 2186854 - T 78 -10.6 -2.80398 | opp_overlap 2186859, overlap 2186859 CAATCAAGTTAATCA GAAAAGCAGTCGAACAATGATGTT ACA ATCGCCATTGTCCAACTGCTTTTT ATTATGCTTCAAAGT TERM 2244 2186859 - 2186899 + T 82 -6.1 -5.24416 | opp_overlap 2186854 2186859 AAGTTAATCAGAAAA GCAGTCGAACAATGATGTT ACA ATCGCCATTGTCCAACTGC TTTTTATTATGCTTC TERM 2245 2186899 - 2186859 - T 100 -10.5 -4.56093 | opp_overlap 2186859, overlap 2186854 AAGTTAATCAGAAAA GCAGTCGAACAATGATGTT ACA ATCGCCATTGTCCAACTGC TTTTTATTATGCTTC TERM 2246 2186975 - 2186919 - T 76 -9.9 -2.73441 | gap 1, opp_overlap 2186927, overlap 2186927 TATTATGCTTCAAAG TCAAA-AAATCGAACAAATGAAAAAG TAAAAT CTTTAACATTTGTCCGATTTATTTGA GAACCACTATAATTT TERM 2247 2186966 - 2186927 - T 86 -7.3 -5.22039 | opp_overlap 2186927, overlap 2186919 TTCAAAGTCAAAAAA TCGAACAAATGAAAAAG TAAAAT CTTTAACATTTGTCCGA TTTATTTGAGAACCA SA1937 2187332 - 2186982 - | hypothetical protein TERM 2248 2187039 - 2187053 + g 85 -8.6 -4.16814 | opp_overlap 2187038 2187036 2187039 TAACCTTAAATATAG TTGCCA TGT TGGCAA TTGTTTATCTCCTAA pdp 2188647 - 2187346 - | pyrimidine-nucleoside phosphorylase SA1939 2189588 - 2188926 - | deoxyribose-phosphate aldolase deoD 2189902 - 2190612 + | purine nucleoside phosphorylase TERM 2249 2190660 - 2190708 + T 76 -6.9 -4.36774 | gap 1, opp_overlap 2190665, overlap 2190665 AATGCGATTAAACTC AAAAAGCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGCTTTTA TTTATATTATTACTT TERM 2250 2190703 - 2190665 - T 80 -6.8 -4.82855 | gap 1, opp_overlap 2190660 2190665 GATTAAACTCAAAAA GCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGC TTTTATTTATATTAT TERM 2251 2190665 - 2190703 + T 83 -6.8 -5.11389 | gap 1, opp_overlap 2190665, overlap 2190660 GATTAAACTCAAAAA GCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGC TTTTATTTATATTAT dps 2191176 - 2190733 - | general stress protein 20U SA1942 2191789 - 2191376 - | hypothetical protein TERM 2252 2192158 - 2192110 - R 85 -4.6 -5.50723 | opp_overlap 2192110 TTATTAAAATAAAAA CGAGCAATCTATCATAAGCTCT TAATT AGCTCTTATGGTTGATTACCCG TCATTTTTCTTTATG SA1943 2193619 - 2192246 - | hypothetical protein TERM 2253 2192979 - 2192995 + g 72 -5.1 -4.76041 | ACTGTACTATTTGTT CTACCAG GAA TTGGTGG TTTTTCATGAATATG TERM 2254 2193730 - 2193745 + r 74 -7.6 -3.84712 | ATACCCTTTGTTCAC TGCGAT TTTA ATCGCA TTTCCTATAACATTG TERM 2255 2194197 - 2194170 - R 71 -3.4 -5.25906 | gap 1, opp_overlap 2194171, overlap 2194171 ATAAACCAACAAAAA CCCCCTCAC-TAC TAT GCAAGTGAGAGGT TATGTTGATGTGCTT SA1944 2194521 - 2194291 - | hypothetical protein SA1945 2195490 - 2194552 - | hypothetical protein TERM 2256 2195903 - 2195876 - R 89 -7 -5.42259 | overlap 2195858 2195879 TCATTTTCAAAAAAA TAACGAGTTACG AAAA CGTAACCCGCTT CAAATCATATTTACT TERM 2257 2195900 - 2195879 - R 100 -10.9 -4.79949 | overlap 2195858 2195876 TTTTCAAAAAAATAA CGAGTTACG AAAA CGTAACCCG CTTCAAATCATATTT SA1946 2196591 - 2195926 - | hypothetical protein czrA 2196743 - 2197063 + | repressor protein czrB 2197065 - 2198042 + | hypothetical protein TERM 2258 2198052 - 2198093 + F 100 -10.2 -5.51046 | opp_overlap 2198056 CATTAATAATTTTAA CCTACTGCCATTGCATCG ATTAAA CTTTTCAATGGCAGTAGG TTTTTTATGTCTTTA truncated-SA 2198308 - 2198781 + | lytic regulatory protein truncated with Tn554 TERM 2259 2198863 - 2198910 + T 76 -2.8 -5.57396 | opp_overlap 2198867, overlap 2198864 2198866 2198867 TATTTCAAAAATAGT AAAACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGCTGA TTTTTTATTCATTGT TERM 2260 2198866 - 2198907 + T 76 -8.9 -3.51774 | opp_overlap 2198867, overlap 2198864 2198863 2198867 TTCAAAAATAGTAAA ACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGC TGATTTTTTATTCAT TERM 2261 2198906 - 2198867 - T 100 -14.6 -4.60746 | opp_overlap 2198866 2198864 2198863 2198867 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA TERM 2262 2198867 - 2198906 + T 100 -12.4 -2.69438 | opp_overlap 2198867, overlap 2198866 2198864 2198863 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA SA1950 2199659 - 2198997 - | hypothetical protein TERM 2263 2199140 - 2199162 + g 82 -4.2 -5.45652 | ATGATTTAGATGTGT TGTGATTATA AAT TCTAATCGCA TTTTTTATTCCAAAT TERM 2264 2200150 - 2200112 - H 74 -9.2 -2.86315 | overlap 2200084 2200111 2200107 CAAATCAAAATTAAT TGGTTATAATGAAC GCTTAATGTCA GTTCATTATAACCA GTAAGGAGAAGGTTA ermA 2200193 - 2200924 + | rRNA methylase Erm(A) TERM 2265 2200972 - 2200931 - T 75 -7.5 -4.10552 | gap 1, opp_overlap 2200935 2200939, overlap 2200935 2200939 TTTCACTAAATTAAA GTAATAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTATT-C TTCCCAAAAATTGTT TERM 2266 2200935 - 2200969 + T 81 -9.5 -3.61894 | opp_overlap 2200935 2200931 2200939, overlap 2200939 ACTAAATTAAAGTAA TAAAGCGTTCTCT AATTTCACA AGAGGACGCTTTA TTCTTCCCAAAAATT TERM 2267 2200969 - 2200935 - T 81 -9.4 -3.66117 | opp_overlap 2200935 2200939, overlap 2200931 2200939 ACTAAATTAAAGTAA TAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTA TTCTTCCCAAAAATT TERM 2268 2200965 - 2200939 - T 71 -5.8 -4.42206 | opp_overlap 2200935 2200939, overlap 2200935 2200931 AATTAAAGTAATAAA GCGTTCTCTAAT TTC ACAAGAGGACGC TTTATTCTTCCCAAA TERM 2269 2200939 - 2200965 + T 71 -5.9 -4.44667 | opp_overlap 2200939 2200935 2200931, overlap 2200935 AATTAAAGTAATAAA GCGTTCTCT AATTTCACA AGAGGACGC TTTATTCTTCCCAAA ant(9) 2201832 - 2201050 - | O-nucleotidylltransferase(9) tnpC 2202360 - 2201983 - | transposition regulatory protein tnpC tnpB 2204259 - 2202367 - | transposition regulatory protein tnpB tnpA 2205341 - 2204256 - | transposition regulatory protein tnpA truncated-SA 2205452 - 2206111 + | lytic regulatory protein truncated with Tn554 TERM 2270 2206153 - 2206114 - Tf 71 -7.8 -3.45762 | opp_overlap 2206118, overlap 2206103 2206113 2206115 TCAACCAAAATAAAT TTTGGAGCCCCTTACAAC TTTA GTTGTTAGGGGCTCTTAT GCATGCGCTTAGCGC TERM 2271 2206152 - 2206115 - Tf 85 -11.3 -2.66372 | opp_overlap 2206118, overlap 2206103 2206114 2206113 CAACCAAAATAAATT TTGGAGCCCCTTACAAC TTTA GTTGTTAGGGGCTCTTA TGCATGCGCTTAGCG TERM 2272 2206118 - 2206149 + TF 100 -17.4 -3.36803 | opp_overlap 2206115 2206114 2206113 CCAAAATAAATTTTG GAGCCCCTTACAAC TTTA GTTGTTAGGGGCTC TTATGCATGCGCTTA TERM 2273 2206462 - 2206437 - Tf 71 -3.3 -5.19879 | CTTGAAACACAAAAA GGGCAACAC TCGGAAAC ATGTTACCC TAATGAGCCCGTTAA SAS071 2207263 - 2207081 - | hypothetical protein SAS069 2206973 - 2207164 + | hypothetical protein SAS070 2207165 - 2207335 + | hypothetical protein SAS072 2207322 - 2207486 + | hypothetical protein TERM 2274 2208088 - 2208045 - T 81 -8.4 -4.10164 | gap 1, opp_overlap 2208046, overlap 2208046 2208048 TTACTAGCATACAAA GGAGCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGCTCT TTGTACATTACTCAT TERM 2275 2208087 - 2208046 - T 93 -11.9 -3.05616 | gap 1, opp_overlap 2208046, overlap 2208045 2208048 TACTAGCATACAAAG GAGCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGCTC TTTGTACATTACTCA TERM 2276 2208046 - 2208087 + T 90 -9.7 -3.98826 | gap 1, opp_overlap 2208045 2208046 2208048 TACTAGCATACAAAG GAGCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGCTC TTTGTACATTACTCA TERM 2277 2208085 - 2208048 - T 73 -8.7 -3.07876 | gap 1, opp_overlap 2208046, overlap 2208046 2208045 CTAGCATACAAAGGA GCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGC TCTTTGTACATTACT SA1957 2209001 - 2208144 - | hypothetical protein SA1958 2209851 - 2209069 - | hypothetical protein TERM 2278 2210038 - 2210006 - R 100 -10 -5.09225 | AGTCGACCTAAAAAA GCACCCTTCTAG TCGATTAAT CTAAAAGGGTGC CATATACTTTAATTT glmS 2211888 - 2210083 - | D-fructose-6-phosphate amidotransferase TERM 2279 2212343 - 2212353 + H 76 -5.4 -5.08255 | TTAATCATTATTGTA CAAC GGT GTTG TTTTGTTTTGCAAAT TERM 2280 2212459 - 2212491 + G 79 -3.6 -5.4659 | TTGATGACACTTTAT TTAATTTTGTCACA TTTAT TTTGACAAAGTTGA TTTTTGTTTATATTG SAS073 2212356 - 2212511 + | hypothetical protein mtlF 2212569 - 2214107 + | PTS system, mannitol specific IIBC component TERM 2281 2214142 - 2214128 - f 85 -5.6 -5.48163 | opp_overlap 2214128 2214126 AAATAAATTAAAAAA TGGAGG ATA CCGCCA TGTTATTGAGTACAC SA1961 2214142 - 2216274 + | hypothetical protein mtlA 2216286 - 2216720 + | PTS system, mannitol specific IIA component mtlD 2216720 - 2217826 + | mannitol-1-phosphate 5-dehydrogenase TERM 2282 2217985 - 2217937 - T 100 -8.6 -5.47159 | opp_overlap 2217937 TCTGAACATAAAAAA TACTCCCTTCA-ACATAGACAC TTAACTT GTGT-TATGTATGAAAGGAGTA TTTTTGCGTTAATAA TERM 2283 2217937 - 2217985 + T 78 -6.4 -4.7629 | opp_overlap 2217937 TCTGAACATAAAAAA TACTCCCTTCA-ACATAGACAC TTAACTT GTGT-TATGTATGAAAGGAGTA TTTTTGCGTTAATAA fmtB 2225590 - 2218145 - | FmtB protein TERM 2284 2219242 - 2219256 + g 75 -8.6 -3.50555 | overlap 2219238 GTTTATCCTTTGCAT CATCAG TTG CTGATG TTACTGTTGTTTCAC TERM 2285 2219582 - 2219603 + g 76 -4.3 -5.05712 | overlap 2219583 ACGTGCAATTTCTTT CGCCGATGC ATCT GCATCTGCA TTTTTAATTATTTCT TERM 2286 2219583 - 2219602 + g 71 -7.8 -3.60987 | overlap 2219582 CGTGCAATTTCTTTC GCCGATGC ATCT GCATCTGC ATTTTTAATTATTTC TERM 2287 2219645 - 2219657 + g 84 -6.3 -5.11063 | AACCACTTCTCTAAT TGCTT CCA AAGCA TTTTTCTTAACTACT TERM 2288 2221222 - 2221234 + g 72 -2.6 -5.24551 | TCGCATCTGCAGTTT GTGC AATAA GCGC TTTTTGTTCGTTTGC TERM 2289 2222296 - 2222313 + g 74 -3.3 -5.22039 | opp_overlap 2222286, overlap 2222297 2222298 AATGAGCTGCATCTA TTGCTGC ATCA GCAGCCG TTTTTTCAGTTTGAA TERM 2290 2225858 - 2225821 - R 100 -12.9 -3.88559 | opp_overlap 2225830 2225831, overlap 2225823 2225831 AATTATTTCTAGAAA CACAAAAAAACCGATGC ATAC GCATCGGCTTATTTGTA ATACAGTATTTATTT TERM 2291 2225856 - 2225823 - R 100 -13.3 -3.52906 | opp_overlap 2225830 2225831, overlap 2225821 2225831 TTATTTCTAGAAACA CAAAAAAACCGATGC ATAC GCATCGGCTTATTTG TAATACAGTATTTAT TERM 2292 2225830 - 2225849 + r 77 -7.8 -4.11183 | opp_overlap 2225823 2225821 2225831, overlap 2225831 TAGAAACACAAAAAA ACCGATGC ATAC GCATCGGC TTATTTGTAATACAG TERM 2293 2225848 - 2225831 - R 100 -11.3 -5.90231 | opp_overlap 2225831 2225830, overlap 2225823 2225821 AGAAACACAAAAAAA CCGATGC ATAC GCATCGG CTTATTTGTAATACA TERM 2294 2225831 - 2225848 + r 91 -11.3 -3.06228 | opp_overlap 2225823 2225821 2225831, overlap 2225830 AGAAACACAAAAAAA CCGATGC ATAC GCATCGG CTTATTTGTAATACA glmM 2227223 - 2225868 - | phosphoglucosamine-mutase TERM 2295 2226392 - 2226402 + g 70 -4 -4.95896 | CAATCATGTCATTAT TCAA TTC TTGA TTTTTATGCATTTCT SA1966 2228182 - 2227250 - | hypothetical protein TERM 2296 2227962 - 2227996 + g 72 -5 -4.67982 | overlap 2227964 ATTATCTTTGATTGT GGTCCTGAAATAGTCA CAT TAACTGTTTCAGGCGC TTTTGTTAAATGCAA SA1967 2228993 - 2228184 - | hypothetical protein TERM 2297 2229095 - 2229085 - R 76 -2.6 -5.56264 | TTTAAATAGAAAAAA TTTA TTT TAAA GATTATAACTACTCT TERM 2298 2229170 - 2229136 - R 90 -7.3 -5.64006 | overlap 2229159 AGTGAATTAAAAAAA GTAGTGCAAAAAGCA AAATA TACTTTATACACTAC AAATCATTTATTTAT arg 2230090 - 2229182 - | arginase TERM 2299 2230221 - 2230198 - R 100 -11.8 -5.94713 | ACTTCATAAAAAAAA GCACTTCCCA AAAA TGGAAAGTGC AAGTAGTGAGCCATA TERM 2300 2230663 - 2230650 - R 70 -8.1 -3.14881 | TAACCGCTTGACCAA GGAGC CATG GCTCC ACAGGTAGGACTCGA TERM 2301 2233557 - 2233576 + r 90 -10.8 -3.66803 | opp_overlap 2233556 2233555 GAGTGTCCTACAACC CCAACAAG CAAG CTTGTTGG TTTGGGCTCTTCCCG TERM 2302 2233933 - 2233960 + r 70 -5.6 -4.28115 | AACGCGTTATTAATC TTGTGAGTGTTC TTTC GAACACTAGCGA TTATTTCTTATGAAT TERM 2303 2234259 - 2234232 - R 73 -3.7 -5.27477 | gap 1, overlap 2234234 2234251 2234253 ACTTTAACCAAAAAA TATTTGAATGTT AAATA AACATTCAAA-A CTGAATACAATATGT TERM 2304 2234258 - 2234234 - R 84 -8.8 -4.26777 | overlap 2234232 2234251 2234253 TTTAACCAAAAAATA TTTGAATGTT AAATA AACATTCAAA ACTGAATACAATATG TERM 2305 2235239 - 2235257 + r 71 -8.8 -2.75963 | overlap 2235238 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT TERM 2306 2235670 - 2235691 + r 83 -10.3 -3.25079 | overlap 2235668 AAGACCGTCTTTCAC TTTTGAACC ATGC GGTTCAAAA TATTATCCGGTATTA TERM 2307 2235916 - 2235932 + r 79 -5.9 -5.09426 | overlap 2235917 ATACTAAATAATGTT TGTAACT TAT AGTTACG TTTTTTGGAATTAAC TERM 2308 2236128 - 2236142 + r 70 -6.4 -4.08571 | opp_overlap 2236121, overlap 2236111 TTTAAAAACAACTGC GTCGTT TTT GACGAC TTTATCATATTATCA TERM 2309 2236313 - 2236287 - R 100 -9.6 -5.16206 | opp_overlap 2236287 AAATCAACATAAAAA CGTACAAAATAA AAG TAATTTTGTACG TTTAGCATATATTAT TERM 2310 2236287 - 2236313 + r 83 -9.6 -3.67285 | opp_overlap 2236287 AAATCAACATAAAAA CGTACAAAATAA AAG TAATTTTGTACG TTTAGCATATATTAT SA1969 2237395 - 2236331 - | hypothetical protein TERM 2311 2237030 - 2236999 - G 70 -8.2 -3.19668 | gap 1, opp_overlap 2237007, overlap 2237007 CACGAGCTAAGGCAA CGGCTAAATTTACTG CAA CAGTAGATTTA-CCG ACACCACCTTTACCG TERM 2312 2237532 - 2237499 - R 100 -7.6 -5.99154 | TATTAAATAAAAAAA GCAGTTAGCCTATT ATTTTA AATAGACCAACTAC TATAATTATTTTAAA SA1970 2238985 - 2237543 - | hypothetical protein TERM 2313 2238002 - 2237990 - G 71 -7.7 -3.6363 | opp_overlap 2237990 ACCAGTATAAATCAA TGGTC TAG GACCA TACTTATCATAAAAT TERM 2314 2238693 - 2238679 - G 74 -6.4 -4.4261 | GTGCTAACATTAAAA CTCCAA AAT TCGGAG CTAAGGCTGCAACAA TERM 2315 2239301 - 2239271 - R 90 -7.7 -5.10461 | gap 1 TCTATTGAACAAAAA GAAGTTG-GAACAC ATAT GTGCCCTCAACTTC AGATATCTATTTTCT SA1971 2239781 - 2239308 - | hypothetical protein TERM 2316 2239660 - 2239646 - G 77 -5.8 -4.72188 | CCAACCTAAAATAAA TAAGTA TTC TACTTA ATCCATATAAACCAA SA1972 2241223 - 2239880 - | hypothetical protein TERM 2317 2241383 - 2241371 - R 83 -3.3 -5.8187 | overlap 2241372 2241373 TATGTAATAAAAAAA GCGGA GTT TCCCC CAGCTTTTCTAAACG SA1973 2242086 - 2241400 - | hypothetical protein SA1974 2243289 - 2242102 - | hypothetical protein SA1975 2243848 - 2243333 - | hypothetical protein TERM 2318 2243821 - 2243835 + g 85 -8.6 -4.2535 | CTCCAACGAGCATGC CACATG AAG CATGTG TTTTACCTGTCATAT SAS074 2244025 - 2244285 + | hypothetical protein TERM 2319 2244346 - 2244300 - T 95 -7.6 -5.63504 | opp_overlap 2244307, overlap 2244287 2244302 2244307 AATTGTATAAAAAAA TACAAAAGGACAACTGTT CTCATAATTTT AACAGTTGTCCTTTTTCA CATATATTTATAACA TERM 2320 2244344 - 2244302 - T 82 -8 -4.45201 | opp_overlap 2244307, overlap 2244287 2244300 2244307 TTGTATAAAAAAATA CAAAAGGACAACTGTT CTCATAATTTT AACAGTTGTCCTTTTT CACATATATTTATAA TERM 2321 2244307 - 2244339 + T 83 -7.9 -4.6644 | opp_overlap 2244302 2244300 2244307 TAAAAAAATACAAAA GGACAACTGTT CTCATAATTTT AACAGTTGTCC TTTTTCACATATATT TERM 2322 2244339 - 2244307 - T 90 -7.9 -5.11475 | opp_overlap 2244307, overlap 2244302 2244300 TAAAAAAATACAAAA GGACAACTGTT CTCATAATTTT AACAGTTGTCC TTTTTCACATATATT TERM 2323 2244375 - 2244365 - T 72 -5.4 -4.79955 | ATATTTATAACAAAA GATG TGC CATC AAAGAAATAATTGGT SA1976 2245724 - 2244354 - | hypothetical protein TERM 2324 2244591 - 2244575 - G 73 -7.3 -4.00465 | opp_overlap 2244587, overlap 2244587 TAGAAGGTAAAAACA TATCGGC AAA ACCGATA ATAATCGTTTGAGAA TERM 2325 2245554 - 2245542 - G 77 -5.5 -4.93365 | overlap 2245544 CGTCACAATTAAAAA TGGCA TTA CGCCA CCTAATACATCTTTA TERM 2326 2245901 - 2245933 + r 79 -5.8 -5.07567 | gap 1, opp_overlap 2245901 GATGAATTCAAAAAA GGTTAAGTAC-AATT ACTG ATTTCGTACTTAACC TTTTTTAAACTCTAA TERM 2327 2245933 - 2245901 - R 86 -7.2 -5.17576 | opp_overlap 2245901 GATGAATTCAAAAAA GGTTAAGTACAA TTACTGATT TCGTACTTAACC TTTTTTAAACTCTAA SA1977 2246928 - 2245960 - | hypothetical protein SA1978 2247956 - 2246925 - | hypothetical protein TERM 2328 2247472 - 2247454 - G 79 -5.2 -5.0917 | CTACTAAAAAACAAA TGGATGGC CAT ACCAGCCA ATGCTAATTTAATGG TERM 2329 2247867 - 2247904 + g 74 -2.1 -5.56263 | gap 1, opp_overlap 2247870, overlap 2247869 2247870 TATACAAATAAAAAG AAAGCACAA-ACTCAC TATATAC GTGAGTGTTGTGCGTC TTTTTCTTTTATGAT TERM 2330 2247870 - 2247901 + g 70 -8.2 -3.21407 | gap 1, opp_overlap 2247870, overlap 2247869 2247867 ACAAATAAAAAGAAA GCACAA-ACTCAC TATATAC GTGAGTGTTGTGC GTCTTTTTCTTTTAT TERM 2331 2247901 - 2247870 - G 90 -8.2 -5.1502 | gap 1, opp_overlap 2247870 2247869 2247867 ACAAATAAAAAGAAA GCACAA-ACTCAC TATATAC GTGAGTGTTGTGC GTCTTTTTCTTTTAT SA1979 2248951 - 2247968 - | hypothetical protein SA1980 2250413 - 2249343 - | hypothetical protein SA1981 2252177 - 2250420 - | hypothetical protein TERM 2332 2251810 - 2251822 + g 71 -6.3 -4.08872 | TGACTTATTAATGTT TGTCT GTG AGACA TTTGCTTATATGTTT SA1982 2253357 - 2252164 - | hypothetical protein TERM 2333 2252867 - 2252856 - G 70 -4.4 -4.72617 | CGATAAAATAACAAA TTGC CTGT GCAA GAAATGTTGTTGGCG SA1983 2253459 - 2255435 + | hypothetical protein TERM 2334 2255590 - 2255543 - T 100 -13.1 -4.84363 | gap 1, opp_overlap 2255553 2255584, overlap 2255553 TCAAATTATTAAAAA TC-ACAAAAAAGCTCGGCAC TAAAATGGT GTGCCGAGCTTTTTTATCGA ATAACTTATTGTAAA TERM 2335 2255579 - 2255553 - T 100 -10.9 -5.47914 | opp_overlap 2255553, overlap 2255543 AAAAATCACAAAAAA GCTCGGCAC TAAAATGGT GTGCCGAGC TTTTTTATCGAATAA TERM 2336 2255553 - 2255579 + T 100 -10.9 -5.26316 | opp_overlap 2255553 2255543 AAAAATCACAAAAAA GCTCGGCAC TAAAATGGT GTGCCGAGC TTTTTTATCGAATAA asp23 2256105 - 2255596 - | alkaline shock protein 23 SA1985 2256407 - 2256168 - | hypothetical protein SA1986 2256956 - 2256420 - | hypothetical protein TERM 2337 2257007 - 2256995 - R 71 -4.9 -4.75776 | AAGTTAATTTAAAAA CATAT TAA ATATG TACCCATCAGTTTTT SA1987 2258693 - 2257131 - | hypothetical protein TERM 2338 2258990 - 2258951 - R 100 -12.3 -5.4251 | opp_overlap 2258954, overlap 2258954 GCTAGACACAAAAAA TAAGTCGCCCTATACAG TATTTT CTGCATAAGGCGACTTT ACTTACTAATCTATA TERM 2339 2258987 - 2258954 - R 100 -14 -4.78477 | opp_overlap 2258954, overlap 2258951 AGACACAAAAAATAA GTCGCCCTATACAG TATTTT CTGCATAAGGCGAC TTTACTTACTAATCT TERM 2340 2258954 - 2258987 + r 90 -9.6 -3.97444 | opp_overlap 2258951 2258954 AGACACAAAAAATAA GTCGCCCTATACAG TATTTT CTGCATAAGGCGAC TTTACTTACTAATCT TERM 2341 2259024 - 2259036 + r 76 -6.3 -4.58283 | overlap 2259028 2259034 TAATTACTAATTTCC CAATC ATT GATTG TTTTTCCAACAATTG SA1988 2260008 - 2259001 - | hypothetical protein TERM 2342 2259213 - 2259227 + g 73 -3.6 -5.1166 | CAAACATAAATTCAT GTGTAA ATG TTATAC TTTTTAATTTTAATG SA1989 2261244 - 2260243 - | hypothetical protein SA1990 2262391 - 2261522 - | hypothetical protein TERM 2343 2262641 - 2262615 - R 81 -7.3 -4.55295 | opp_overlap 2262615 2262617 CTTTCTATAAATAAA GACCTACCAGC ACTCG ACTGATAGGCC TTTTAATATCTATAA lacG 2264069 - 2262657 - | 6-phospho-beta-galactosidase lacE 2265799 - 2264087 - | PTS system, lactose-specific IIBC component lacF 2266116 - 2265805 - | PTS system, lactose-specific IIA component lacD 2267118 - 2266138 - | tagatose 1,6-diphosphate aldolase lacC 2268054 - 2267122 - | tagatose-6-phosphate kinase lacB 2268582 - 2268067 - | galactose-6-phosphate isomerase subunit LacB TERM 2344 2268115 - 2268143 + g 78 -7.5 -4.10791 | opp_overlap 2268115 2268119 TAAGAATTCATCAAA GAAATGTGGATCA GCT TGATCTGCATTGC TTGTTTCTAAATGTT lacA 2269026 - 2268598 - | galactose-6-phosphate isomerase subunit LacA TERM 2345 2268934 - 2268978 + g 89 -9 -4.29953 | gap 1, opp_overlap 2268942 2268944, overlap 2268931 CTGTCCTTCTGTTAC GTCAACAACATCATATTTATT GTCT AATAAGTATGAT-TTGATGAC TTCTTTTAATCGTTT TERM 2346 2269195 - 2269145 - R 70 -6.4 -4.13654 | overlap 2269162 CGTTTAAATTATAAA CATAAACAAACAATAAATCAACAT AAT ATGTTTATAACCTGTTTGTTTATG ACATATTTTCAAACA TERM 2347 2269355 - 2269313 - R 76 -3.7 -5.4477 | gap 1, opp_overlap 2269324, overlap 2269316 AAATTTGCAAAAAAA TA-ACCCATAAATGAATGCA AATT CACATTCACTTATGAGCATA TAGATACATATTTTA TERM 2348 2269351 - 2269316 - R 100 -9.2 -4.79949 | opp_overlap 2269324, overlap 2269313 TTTGCAAAAAAATAA CCCATAAATGAATGCA AATT CACATTCACTTATGAG CATATAGATACATAT lacR 2270148 - 2269393 - | lactose phosphotransferase system repressor SA1999 2270399 - 2271130 + | NAD-dependent deacetylase TERM 2349 2271139 - 2271176 + F 79 -7.9 -4.20354 | opp_overlap 2271145, overlap 2271145 AGAGTAATCAGTAGG TAAAAAGCATTTCCC GAGTAACA GGGAGATGCTTTTAA TTTTGGAGTTGCGTT TERM 2350 2271145 - 2271170 + F 78 -6.9 -4.67641 | opp_overlap 2271145, overlap 2271139 ATCAGTAGGTAAAAA GCATTTCCC GAGTAACA GGGAGATGC TTTTAATTTTGGAGT TERM 2351 2271170 - 2271145 - f 71 -4.7 -4.68994 | opp_overlap 2271139 2271145 ATCAGTAGGTAAAAA GCATTTCCC GAGTAACA GGGAGATGC TTTTAATTTTGGAGT SAS075 2271179 - 2271328 + | hypothetical protein SA2000 2271618 - 2271415 - | hypothetical protein TERM 2352 2271815 - 2271776 - R 72 -5.1 -4.78753 | TTAAGAGTAATAAAA TAACCTGCAACATAGAC TTTAAC ATCCAAGTTTCAGGTTA GCGTAATGTAAATTA SA2001 2272699 - 2271851 - | hypothetical protein SA2002 2273185 - 2272769 - | hypothetical protein TERM 2353 2273390 - 2273406 + H 76 -5.3 -5.11112 | opp_overlap 2273388 2273393, overlap 2273388 AAGATTGATAATATT TAATTTT TTA AAAATTA TTTTTGTTGCAATTT TERM 2354 2273974 - 2273963 - g 74 -5.8 -4.4727 | GTAATATTGAGAAAA TCGC AGAA GCGA TGAGGCATCCTAAAA TERM 2355 2275396 - 2275386 - g 71 -6.8 -4.24963 | overlap 2275376 TACAACGATTGAAAA TCGC AAA GCGA ATGGGTATACGTTAT hysA 2273593 - 2276022 + | hyaluronate lyase precursor TERM 2356 2276069 - 2276027 - T 100 -13.8 -3.65446 | opp_overlap 2276032 2276057, overlap 2276032 TAACTAAATAAGCAA GAAAATCTCGACACTATA CCATTTT TATAGTGTCGAGATTTTA TAAGTATCGCCATCA TERM 2357 2276032 - 2276064 + T 100 -13.7 -4.45083 | opp_overlap 2276027 2276032, overlap 2276057 AAATAAGCAAGAAAA TCTCGACACTATA CCATTTT TATAGTGTCGAGA TTTTATAAGTATCGC TERM 2358 2276064 - 2276032 - T 100 -13.7 -4.85618 | opp_overlap 2276032 2276057, overlap 2276027 AAATAAGCAAGAAAA TCTCGACACTATA CCATTTT TATAGTGTCGAGA TTTTATAAGTATCGC SA2004 2276936 - 2276082 - | hypothetical protein SA2005 2277962 - 2277147 - | hypothetical protein SA2006 2278257 - 2278682 + | hypothetical protein TERM 2359 2278711 - 2278737 + T 75 -5.9 -4.80882 | AAAATAGTTACACAG GGCAAACGC TGAAAAATT GCGTTTGTC TTTTTAGTATGAAAT TERM 2360 2278931 - 2278895 - T 100 -16.9 -3.17901 | opp_overlap 2278895 2278899, overlap 2278899 ATATCTGGAACCTAA TAAATCCCCTCACTACT GCT AATAGTGAAGGGATTTA TTTTATTACTTAGAC TERM 2361 2278895 - 2278931 + T 100 -12.5 -4.78572 | opp_overlap 2278895 2278899, overlap 2278899 ATATCTGGAACCTAA TAAATCCCCTCACTACT GCT AATAGTGAAGGGATTTA TTTTATTACTTAGAC TERM 2362 2278927 - 2278899 - T 100 -13.3 -4.2528 | opp_overlap 2278895 2278899, overlap 2278895 CTGGAACCTAATAAA TCCCCTCACTACT GCT AATAGTGAAGGGA TTTATTTTATTACTT TERM 2363 2278899 - 2278927 + T 93 -8.9 -4.91657 | opp_overlap 2278899 2278895, overlap 2278895 CTGGAACCTAATAAA TCCCCTCACTACT GCT AATAGTGAAGGGA TTTATTTTATTACTT SA2007 2279770 - 2279066 - | hypothetical protein alsS 2281471 - 2279807 - | acetolactate synthase SA2009 2281823 - 2281993 + | hypothetical protein TERM 2364 2282435 - 2282467 + T 75 -9.3 -3.02471 | opp_overlap 2282440, overlap 2282440 CCCACACAAACGCAA AAAAACACCTCGA CATAACA TCGAGGTGTTTTG TATATATCGTCCGAC TERM 2365 2282462 - 2282440 - T 100 -10.6 -5.59564 | opp_overlap 2282435 2282440 ACAAACGCAAAAAAA CACCTCGACA TAA CATCGAGGTG TTTTGTATATATCGT TERM 2366 2282440 - 2282462 + T 100 -9.2 -4.65446 | opp_overlap 2282440, overlap 2282435 ACAAACGCAAAAAAA CACCTCGA CATAACA TCGAGGTG TTTTGTATATATCGT SA2010 2283737 - 2282721 - | hypothetical protein TERM 2367 2283794 - 2283848 + r 79 -9.1 -3.48593 | gap 1, opp_overlap 2283797 2283802, overlap 2283812 ACCATCTTCTTTTAA TTATT-ACATTATTTAGTCGTTAGGG GCCC CCCTAACTATTAAATAATATAAATAA TTATCTCAAAAAATG TERM 2368 2283844 - 2283797 - R 100 -12.4 -2.71011 | opp_overlap 2283794 2283812, overlap 2283802 ATCTTCTTTTAATTA TTACATTATTTAGTCGTTAGGG GCCC CCCTAACTATTAAATAATATAA ATAATTATCTCAAAA TERM 2369 2283839 - 2283802 - R 76 -10.1 -2.86164 | opp_overlap 2283794 2283812, overlap 2283797 CTTTTAATTATTACA TTATTTAGTCGTTAGGG GCCC CCCTAACTATTAAATAA TATAAATAATTATCT TERM 2370 2283812 - 2283829 + r 78 -9.9 -3.11768 | opp_overlap 2283802 2283797, overlap 2283794 TTACATTATTTAGTC GTTAGGG GCCC CCCTAAC TATTAAATAATATAA TERM 2371 2283887 - 2283921 + r 76 -9.6 -2.63823 | opp_overlap 2283883 2283880 2283898, overlap 2283883 2283892 2283898 AATTAAAATAATTAT TTATAGTAAAATTTTC GAA GAAAAATTTACTGTAA TCAATTGTATACCTT SA2011 2284647 - 2283982 - | hypothetical protein SA2012 2285258 - 2284611 - | hypothetical protein TERM 2372 2285179 - 2285192 + gr 77 -5.3 -4.93079 | AAATTTTTTATATAC TCATC ATTA GATGA TTTATTTATTTTATT truncated-SA 2286832 - 2286509 - | hypothetical protein SAS076 2287368 - 2287213 - | hypothetical protein TERM 2373 2287257 - 2287293 + g 78 -10.4 -2.77088 | gap 1, opp_overlap 2287265, overlap 2287256 2287265 GAACTTCAACTGTTT TCCCA-CAATATTCAGC TGAT GCTGAATATTGATTGGA CTTATATGTAATCAT TERM 2374 2287265 - 2287284 + g 79 -9.4 -3.38326 | opp_overlap 2287265, overlap 2287257 2287256 ACTGTTTTCCCACAA TATTCAGC TGAT GCTGAATA TTGATTGGACTTATA TERM 2375 2287284 - 2287265 - G 77 -9.4 -3.28791 | opp_overlap 2287265 2287257 2287256 ACTGTTTTCCCACAA TATTCAGC TGAT GCTGAATA TTGATTGGACTTATA TERM 2376 2287355 - 2287390 + g 82 -3.4 -5.69262 | opp_overlap 2287354, overlap 2287356 TTCACTTTATATGAG TTTCTTACATTCAC ATTCGGTA GTGATTGTAAGAAC TTTTTCTTTTTCTAA TERM 2377 2287356 - 2287389 + g 73 -6.9 -3.99117 | opp_overlap 2287354, overlap 2287355 TCACTTTATATGAGT TTCTTACATTCAC ATTCGGTA GTGATTGTAAGAA CTTTTTCTTTTTCTA SAS077 2287510 - 2287346 - | hypothetical protein truncated-SA 2287859 - 2287533 - | hypothetical protein SA2015 2288704 - 2289651 + | hypothetical protein TERM 2378 2289715 - 2289683 - T 100 -11.5 -5.75538 | opp_overlap 2289681 TCCAAAAAATAAAAA GGAAGTTAAGCAA TGTTTAG TTGCCTAACTTCC GATATTGAATGCATC TERM 2379 2289779 - 2289811 + T 83 -10.7 -3.02471 | opp_overlap 2289784, overlap 2289784 AACACACAAACGCAA AAAAACACCTCGACA TAA TATCGAGGTGTTTTG TATATATCGTCCGAC TERM 2380 2289806 - 2289784 - T 100 -12.8 -5.59564 | opp_overlap 2289779 2289784 ACAAACGCAAAAAAA CACCTCGACA TAA TATCGAGGTG TTTTGTATATATCGT TERM 2381 2289784 - 2289806 + T 100 -10.6 -4.65446 | opp_overlap 2289784, overlap 2289779 ACAAACGCAAAAAAA CACCTCGACA TAA TATCGAGGTG TTTTGTATATATCGT rpsI 2290221 - 2289829 - | 30S ribosomal protein S9 TERM 2382 2290119 - 2290141 + g 77 -9.2 -3.18452 | GTAAGTATTCGCGTA CGTCACGGTT ATT AACTGTGATG TTACCTTCACCTGGT rplM 2290678 - 2290241 - | 50S ribosomal protein L13 TERM 2383 2290922 - 2290935 + r 70 -3.9 -5.08169 | GTCAATGGCAATCAG TCATT TTGT AATGA TTTTTTGCGATGTAT truA 2291721 - 2290918 - | tRNA pseudouridine synthase A SA2019 2292532 - 2291726 - | hypothetical protein TERM 2384 2292437 - 2292425 - G 71 -3.5 -5.04175 | TGAATGACAGAAAAA TATTA ATA TAATA AAAAGAAAAACAAAC SA2020 2293382 - 2292522 - | cobalt transporter ATP-binding subunit SA2021 2294188 - 2293379 - | cobalt transporter ATP-binding subunit TERM 2385 2293839 - 2293856 + g 71 -6.3 -4.13945 | CTTCTATGCATTTCG TCATGTG GAAC CGCATGA TTTTCGAGTCCAAAT TERM 2386 2294127 - 2294107 - G 83 -6.9 -4.75288 | opp_overlap 2294105 2294113 2294118 GTATATTAAAAGAAA CATCTTTCA ATG TGAAGGATG CATCACTTTGATATT TERM 2387 2294516 - 2294557 + r 85 -10.3 -3.67597 | opp_overlap 2294516 2294520 AAAAGTAGATATAAA GAAATCGGACTTAAAAACA TTTC TGTTCATAAGTCCGATATC TTATTCAATAAAAAA TERM 2388 2294557 - 2294516 - R 100 -12.5 -4.19927 | opp_overlap 2294516, overlap 2294520 AAAAGTAGATATAAA GAAATCGGACTTAAAAACA TTTC TGTTCATAAGTCCGATATC TTATTCAATAAAAAA TERM 2389 2294553 - 2294520 - R 100 -11.9 -4.65722 | opp_overlap 2294516, overlap 2294516 GTAGATATAAAGAAA TCGGACTTAAAAACA TTTC TGTTCATAAGTCCGA TATCTTATTCAATAA rplQ 2295094 - 2294726 - | 50S ribosomal protein L17 rpoA 2296055 - 2295111 - | DNA-directed RNA polymerase subunit alpha rpsK 2296519 - 2296130 - | 30S ribosomal protein S11 TERM 2390 2296243 - 2296257 + g 76 -10 -2.86618 | overlap 2296245 2296248 GAATAGCTGATTCAC GACCTG GAC CAGGTC CTTTAACTGTTACTT TERM 2391 2296324 - 2296342 + g 73 -8.2 -3.54575 | opp_overlap 2296324 2296323, overlap 2296322 2296317 ATGCAGTTTCAGAAG CCATTTGT GCT GCAAATGG TGTTGATTTTTTAGA rpsM 2296908 - 2296543 - | 30S ribosomal protein S13 TERM 2392 2296801 - 2296811 + g 73 -4 -5.03145 | AGCTGATACGTTAGC TTCT TCA AGAA TTTTTTGAGCAGTTG rpmJ 2297044 - 2296931 - | 50S ribosomal protein L36 infA 2297294 - 2297076 - | translation initiation factor IF-1 adk 2298134 - 2297487 - | adenylate kinase secY 2299443 - 2298151 - | preprotein translocase subunit SecY TERM 2393 2298969 - 2298959 - G 74 -6.8 -4.29508 | overlap 2298955 AGCCATATTAAGAAA GCAG TTC CTGC TGTCAAAACTAGTGC TERM 2394 2299091 - 2299117 + g 74 -6.7 -4.33819 | opp_overlap 2299090 2299091 2299097, overlap 2299093 AATGCTAAAGAAATT GCTAAATAACG AGTAA CGTTATTTAAC TTTCTTCTACCTACT TERM 2395 2299338 - 2299316 - G 81 -7.7 -4.30576 | opp_overlap 2299316 2299331 TGGGGATTATCAAAA GCTGCAGGA TTTAC TCCTGGAGC TGGTATATAAGTCCC rplO 2299883 - 2299443 - | 50S ribosomal protein L15 rpmD 2300079 - 2299900 - | 50S ribosomal protein L30 rpsE 2300596 - 2300096 - | 30S ribosomal protein S5 TERM 2396 2300397 - 2300410 + g 76 -3.8 -5.32565 | ACTAAATCTTTTTTA GCTG CTTCAA CAGC TTTTTTGATTGCTTC rplR 2300976 - 2300617 - | 50S ribosomal protein L18 rplF 2301543 - 2301007 - | 50S ribosomal protein L6 rpsH 2301966 - 2301568 - | 30S ribosomal protein S8 rpsN 2302183 - 2301998 - | 30S ribosomal protein S14 rplE 2302745 - 2302206 - | 50S ribosomal protein L5 rplX 2303089 - 2302772 - | 50S ribosomal protein L24 TERM 2397 2303007 - 2303029 + g 76 -7.8 -4.06633 | ACACGGTCTTTTTTA GGTAGAGTAG CAA TTACTTTACC TTCTTTACCTTTGTC rplN 2303493 - 2303125 - | 50S ribosomal protein L14 rpsQ 2303788 - 2303525 - | 30S ribosomal protein S17 rpmC 2304021 - 2303812 - | 50S ribosomal protein L29 TERM 2398 2303886 - 2303903 + g 81 -7.7 -4.3953 | CAATCGTTTTTCTTA CTGTACG AATA CGTGCAG TTTCTTCTAATTGAC rplP 2304445 - 2304011 - | 50S ribosomal protein L16 rpsC 2305101 - 2304448 - | 30S ribosomal protein S3 rplV 2305478 - 2305125 - | 50S ribosomal protein L22 rpsS 2305785 - 2305507 - | 30S ribosomal protein S19 TERM 2399 2305801 - 2305842 + r 74 -8.1 -3.59079 | gap 1 TTGGGCGCCTCCCTT CTTATTATGTGCGTGCAGCT TTA AGCCGCACACCCA-AATAAG TTGATTATATTATTT rplB 2306685 - 2305852 - | 50S ribosomal protein L2 rplW 2306993 - 2306718 - | 50S ribosomal protein L23 rplD 2307616 - 2306993 - | 50S ribosomal protein L4 rplC 2308305 - 2307643 - | 50S ribosomal protein L3 TERM 2400 2308058 - 2308068 + g 84 -6.8 -5.0538 | ATGAAGCGCTTAGGT GCTG CGT CAGC TTTTTTAGCGTGACC rpsJ 2308641 - 2308333 - | 30S ribosomal protein S10 SA2049 2308998 - 2309387 + | hypothetical protein TERM 2401 2309561 - 2309539 - T 100 -12.8 -5.64421 | opp_overlap 2309539 ACTTCAAAGAAAAAA CGACTACCAA TCA TTGGCAGTCG TTTTTTGTGTCTGGA TERM 2402 2309539 - 2309561 + T 100 -10.6 -5.4251 | opp_overlap 2309539 ACTTCAAAGAAAAAA CGACTACCAA TCA TTGGCAGTCG TTTTTTGTGTCTGGA SA2050 2310912 - 2309578 - | hypothetical protein TERM 2403 2310984 - 2310994 + r 74 -5.4 -4.98255 | opp_overlap 2310977 2310984 AAACAATACCAAAAG CGAA CTT TTCG TTTTTCTGATTCAAC topB 2313160 - 2311025 - | DNA topoisomerase III TERM 2404 2312765 - 2312789 + g 77 -5 -5.06816 | opp_overlap 2312765 2312770 TTTTTTAGTAACTGA GCTAATCCAT AATCG ACGGATTGGC TTTTTGTTACCAACT SA2052 2313245 - 2314222 + | hypothetical protein TERM 2405 2314239 - 2314269 + F 81 -6.2 -5.1286 | opp_overlap 2314239 ATACCAAGCAAATAC CCCACAGTACTT CATTAGC ATGTATTGTGGG TTTTTCTACTTTTTG SA2053 2314403 - 2315266 + | hypothetical protein TERM 2406 2315603 - 2315626 + G 71 -6.8 -4.15222 | opp_overlap 2315609, overlap 2315605 2315609 AACTTGCATTGTCTG TAGAAATTGG GAAT CCAATTTCTC TTTGTTGGGGCCCCT TERM 2407 2315605 - 2315624 + G 80 -9.4 -3.6761 | opp_overlap 2315609, overlap 2315603 2315609 CTTGCATTGTCTGTA GAAATTGG GAAT CCAATTTC TCTTTGTTGGGGCCC SAS080 2315550 - 2315669 + | hypothetical protein TERM 2408 2315665 - 2315681 + T 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTTC GTCAGC TTCTGTGTTGGGGCC TERM 2409 2315729 - 2315717 - T 90 -7.7 -5.1925 | opp_overlap 2315716 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT TERM 2410 2315876 - 2315822 - T 100 -11.7 -3.91032 | gap 1, opp_overlap 2315822 2315825 2315827, overlap 2315827 CAACTATGTCATAAA TAAAAGCCCCCTTT-TCACAATATGC ATTT ACATGTTGTGGTAAAGGGGGCTCTCA TTTTCTACGAATACT TERM 2411 2315822 - 2315876 + T 100 -11 -4.3898 | gap 1, opp_overlap 2315822 2315827, overlap 2315825 2315827 CAACTATGTCATAAA TAAAAGCCCCCTTT-TCACAATATG CATTTA CATGTTGTGGTAAAGGGGGCTCTCA TTTTCTACGAATACT TERM 2412 2315825 - 2315873 + T 100 -12.7 -3.17598 | gap 1, opp_overlap 2315822 2315827, overlap 2315822 2315827 CTATGTCATAAATAA AAGCCCCCTTT-TCACAATATG CATTTA CATGTTGTGGTAAAGGGGGCTC TCATTTTCTACGAAT TERM 2413 2315827 - 2315871 + T 100 -15.3 -3.14587 | gap 1, opp_overlap 2315822 2315827, overlap 2315825 2315822 ATGTCATAAATAAAA GCCCCCTTT-TCACAATATG CATTTA CATGTTGTGGTAAAGGGGGC TCTCATTTTCTACGA TERM 2414 2315871 - 2315827 - T 100 -11.6 -4.99645 | gap 1, opp_overlap 2315827 2315825 2315822, overlap 2315822 ATGTCATAAATAAAA GCCCCCTTT-TCACAATATGC ATTT ACATGTTGTGGTAAAGGGGGC TCTCATTTTCTACGA SA2054 2316829 - 2315921 - | hypothetical protein SAS081 2316962 - 2317126 + | hypothetical protein SA2055 2317371 - 2317688 + | hypothetical protein TERM 2415 2317818 - 2317865 + T 100 -12.3 -3.4033 | opp_overlap 2317807 2317823, overlap 2317823 AAAATTTCAAATTTT AAAAAGCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGCTTTTA TATTATCTATCGTTT TERM 2416 2317860 - 2317823 - T 100 -12.2 -4.70879 | opp_overlap 2317818 2317823 TTCAAATTTTAAAAA GCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGC TTTTATATTATCTAT TERM 2417 2317823 - 2317860 + T 100 -12.2 -4.77867 | opp_overlap 2317823, overlap 2317818 TTCAAATTTTAAAAA GCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGC TTTTATATTATCTAT SA2056 2321039 - 2317872 - | hypothetical protein TERM 2418 2318708 - 2318719 + g 79 -4.4 -5.31877 | TACCATTTTCTTTAA CAGT CGTA ACTG TTTTTTCTGGTAAGT TERM 2419 2319428 - 2319440 + g 71 -3.3 -5.11613 | overlap 2319416 GATGTTGTTTATTAC GACGT TTA ACGCC TTTTTTAAATAGTGT TERM 2420 2321141 - 2321107 - R 78 -4.3 -5.41143 | opp_overlap 2321107 TATTGTGTAAAAAAA TCTGAACGCAAATGA CAGTC TTATGAGCGTTCAGA TTTCAGTCGTTAATC fmhB 2322421 - 2321156 - | FmhB protein TERM 2421 2321199 - 2321215 + g 70 -8.1 -3.23598 | TTAATTTTAGCTTTT GTTAAAC GCG GTTTAAC TTGCTCAATTAATTG SA2058 2322810 - 2323061 + | hypothetical protein SA2059 2323817 - 2323053 - | hypothetical protein TERM 2422 2323955 - 2323939 - H 70 -5.1 -4.57569 | opp_overlap 2323938 2323940, overlap 2323940 CTATTGTTGTAAAAA GGTTAGC TAA GCTAACT ATTTTGTCTTAGGAG TERM 2423 2323954 - 2323940 - H 74 -8.6 -3.3422 | opp_overlap 2323938 2323940, overlap 2323939 TATTGTTGTAAAAAG GTTAGC TAA GCTAAC TATTTTGTCTTAGGA TERM 2424 2323940 - 2323954 + H 82 -8.6 -3.94773 | opp_overlap 2323940 2323939, overlap 2323938 TATTGTTGTAAAAAG GTTAGC TAA GCTAAC TATTTTGTCTTAGGA SA2060 2323979 - 2324419 + | hypothetical protein SA2061 2324412 - 2325623 + | hypothetical protein SA2062 2326075 - 2325725 - | hypothetical protein TERM 2425 2326466 - 2326482 + r 72 -8 -3.68024 | TGCACATTATTGTAA GCTGAC TTTCT GTCAGC TTCTGTGTTGGGGCC moaA 2327674 - 2326652 - | molybdenum cofactor biosynthesis protein A mobA 2328293 - 2327694 - | molybdopterin-guanine dinucleotide biosynthesis protein A moaD 2328533 - 2328300 - | molybdopterin synthase small subunit moaE 2328985 - 2328539 - | molybdopterin converting factor moa (subunit 2) TERM 2426 2329005 - 2329023 + r 77 -4.6 -5.19819 | overlap 2329008 TTCAATCCTCTATGT TAATTGTG TAT CACAATCA TTTTTAATTTTATTT mobB 2329484 - 2328999 - | molybdopterin-guanine dinucleotide biosynthesis mobB TERM 2427 2329434 - 2329420 - G 71 -6.4 -4.15044 | overlap 2329405 TGTGTCTTTAAGAAA GAGACA ATA TGCCTC ATCAATGTTGTCTTA TERM 2428 2329444 - 2329455 + g 73 -4.4 -4.85599 | TGCCTCATCAATGTT GTCT TACC AGAC TTTTTGTAACCTACA moeA 2330740 - 2329481 - | molybdopterin biosynthesis protein moeA moaC 2330803 - 2331297 + | molybdenum cofactor biosynthesis protein C moaB 2331805 - 2331299 - | molybdopterin precursor biosynthesis moaB moeB 2332840 - 2331836 - | molybdopterin biosynthesis protein moeB modC 2333615 - 2333010 - | molybdenum transport ATP-binding protein ModC modB 2334287 - 2333616 - | molybdenum ABC transporter permease TERM 2429 2334025 - 2333999 - G 100 -12.4 -3.965 | overlap 2333992 GTGGAAAACTAACAA TGACAGATGCTA TCA CAGCACCTGTCA AAGTGAACACTACAG modA 2335083 - 2334301 - | molybdate-binding protein TERM 2430 2335339 - 2335319 - H 70 -5.5 -4.21827 | opp_overlap 2335333 GCAAATATGTTAAAA TTTTAAGCA AAT TGCTTTAAA ATAAAGTTTAAGCTA FdhD 2335372 - 2336169 + | formate dehydrogenase accessory protein TERM 2431 2336271 - 2336307 + T 100 -13.2 -5.58179 | opp_overlap 2336271 AAAACAATTTAAAAA GCAGTAAGTTGATTTC TACTC GAAACCAGCTTACTGC TTTTTTATTCTAATA TERM 2432 2336307 - 2336271 - T 100 -13.2 -4.85195 | opp_overlap 2336271 AAAACAATTTAAAAA GCAGTAAGTTGATTTC TACTC GAAACCAGCTTACTGC TTTTTTATTCTAATA SA2076 2337111 - 2336341 - | hypothetical protein SA2077 2337742 - 2337188 - | hypothetical protein SA2078 2338804 - 2337863 - | hypothetical protein TERM 2433 2338572 - 2338559 - G 79 -4.5 -5.24129 | opp_overlap 2338559 TGCGTCCATAAAAAA GGCAT GCAT ACGCC ATTCTTTAGGAAATG TERM 2434 2339178 - 2339133 - R 74 -5 -4.87665 | gap 1, opp_overlap 2339149 TTCTAGCTATAAAAA TAAGAGCCTAATACAATATCA AAAGA TGATAT-GTTTCAGACTCTCA TTTCACTAACTTATA SA2079 2340110 - 2339202 - | hypothetical protein TERM 2435 2340174 - 2340194 + r 85 -2 -6.09196 | gap 1, opp_overlap 2340179, overlap 2340179 GATTGCATATACATT TACAATAGC TAGT GCTATT-TA TTTTTTTATTTTCGC TERM 2436 2340179 - 2340190 + r 78 -4.4 -5.36181 | opp_overlap 2340179, overlap 2340174 CATATACATTTACAA TAGC TAGT GCTA TTTATTTTTTTATTT SA2080 2341478 - 2340324 - | hypothetical protein SAS082 2341617 - 2341525 - | hypothetical protein TERM 2437 2341665 - 2341623 - R 100 -9.5 -4.87665 | gap 1, opp_overlap 2341624 2341627 2341634, overlap 2341625 TTTTATCCATAAAAA TA-CACCTTAAACTATACAA TTCG CTGTATGGTTTAAGGTGATA TTCAAACAATATTAG TERM 2438 2341624 - 2341663 + r 90 -11.7 -3.03007 | opp_overlap 2341623 2341625, overlap 2341627 2341634 TTTATCCATAAAAAT ACACCTTAAACTATACA ATTCGC TGTATGGTTTAAGGTGA TATTCAAACAATATT TERM 2439 2341662 - 2341625 - R 100 -13.7 -4.06182 | opp_overlap 2341624 2341627 2341634, overlap 2341623 TTATCCATAAAAATA CACCTTAAACTATACAA TTCG CTGTATGGTTTAAGGTG ATATTCAAACAATAT TERM 2440 2341627 - 2341660 + r 89 -12 -2.73994 | opp_overlap 2341625 2341623, overlap 2341624 2341634 ATCCATAAAAATACA CCTTAAACTATACA ATTCGC TGTATGGTTTAAGG TGATATTCAAACAAT SA2081 2342600 - 2341695 - | hypothetical protein ureA 2342860 - 2343162 + | urease subunit gamma TERM 2441 2343366 - 2343380 + G 79 -10 -3.28001 | AACATTTAGATATTC CAGCTG GAG CAGCTG TTCGATTTGAACCTG ureB 2343176 - 2343586 + | urease subunit beta TERM 2442 2345129 - 2345119 - g 74 -6.8 -4.37711 | GCATTAAATTTAAAA CGCA TGG TGCG TCCAGTTAAAAATAT ureC 2343583 - 2345298 + | urease subunit alpha ureE 2345311 - 2345763 + | urease accessory protein UreE TERM 2443 2345791 - 2345803 + G 71 -7.7 -3.5393 | AAGATTATTTCAGTT CTGTG ATT CACAG TTTCCAACAGGTGCT ureF 2345756 - 2346445 + | urease accessory protein UreF ureG 2346458 - 2347072 + | urease accessory protein UreG ureD 2347264 - 2347908 + | urease accessory protein UreD TERM 2444 2347969 - 2347917 - T 90 -6.6 -5.52079 | opp_overlap 2347917 ATATTAAAATAAAAA GACTAG-TGTACCTTGTTTCAAGCTT AAT AAGCT-GAAATAAGGTATGGCTAGTC TTTAACTTTAATTAA TERM 2445 2347917 - 2347969 + T 100 -13.2 -3.89336 | opp_overlap 2347917 ATATTAAAATAAAAA GACTAGT-GTACCTTGTTTCAAGCTT AAT AAGCT-GAAATAAGGTATGGCTAGTC TTTAACTTTAATTAA sarR 2348444 - 2348097 - | hypothetical protein TERM 2446 2348352 - 2348364 + g 80 -6.3 -4.78477 | ATAAATTTCTTCATA GTTCA AAT TGAAC TTCTTTTTTGTATCT SA2090 2349198 - 2348872 - | hypothetical protein SA2091 2350005 - 2349262 - | hypothetical protein SA2092 2351986 - 2350031 - | hypothetical protein TERM 2447 2352235 - 2352245 + H 74 -5.4 -4.97402 | ATAGAAACTTGATCG TTCG TGT CGAA TTTTTATGCATTTTC TERM 2448 2352382 - 2352396 + H 77 -7.2 -4.20797 | opp_overlap 2352381 GCCGTAGTTATAAGT TTTGCA AAA TGCAAA TTTCTATACTTTTAA ssaA 2352596 - 2353399 + | hypothetical protein TERM 2449 2353421 - 2353449 + T 100 -14.7 -5.4387 | ATGGCTATGTTTTAC GCCAACAAGGTTT CAA GAGCCTTGTTGGC TTTTTTAATTTCTAT SAS083 2353545 - 2353417 - | hypothetical protein TERM 2450 2353516 - 2353473 - G 100 -9.9 -5.52384 | opp_overlap 2353473 TTTCTATGAAAAAAA TCGAATTGGTAAAAATC TCAAAATTTC GATTTTCACCAATCCGA TTCACTCTGTAATAA TERM 2451 2353595 - 2353540 - G 80 -6.5 -4.67968 | gap 2 GTAATAAAGAATAAA CAACATACAGCC-A-TTGACACACCCA AATT TAGGCATGTCAAATCGGCTATACATTG ATAAATTTTTAGTTA SA2094 2355233 - 2353833 - | hypothetical protein TERM 2452 2354940 - 2354914 - G 82 -5.2 -5.21709 | overlap 2354916 GCTGATATTAAAAAA TAGCTTGGATTC AAT AAATCTAAGCCA TAATAAATCAAGGCT TERM 2453 2355022 - 2355053 + g 100 -9.5 -4.91459 | opp_overlap 2355018 2355019, overlap 2355018 2355017 ATAATTAAAATTGCA GGCATTGCAGTAT TTAAAC GTTCTGCAATGCC TTTTTCTAAATCTTG SA2095 2356410 - 2355328 - | hypothetical protein TERM 2454 2356497 - 2356475 - H 82 -6.3 -5.18995 | opp_overlap 2356475 2356496 AAGACAATATAAAAA TGATGCGAA TTCAT TACGCATCA TTATAAATGTTAAGT SA2096 2356658 - 2357080 + | hypothetical protein TERM 2455 2357132 - 2357165 + F 100 -12.8 -6.04419 | TTAATCTCATTGTAA CTTTGACTAATTTT TATTAC AAAATTAGTCAAAG TTTTTTTATTCTTTT SA2097 2357317 - 2357817 + | hypothetical protein TERM 2456 2357883 - 2357907 + F 100 -8 -5.69023 | gap 1 TCATCAAAAAACTTT GAGCTT-TCCT TTAT AGGAGAAGCTC TTTTTTTGCTATTTT SA2098 2358178 - 2359131 + | glycerate dehydrogenase TERM 2457 2359212 - 2359164 - T 100 -9.8 -4.9934 | opp_overlap 2359170, overlap 2359167 2359170 ATAACATTATAAAAA CAAGAACCCCCATATGTTGA GCTCTCGTT TCAACATACGGGGGTTTTCA TATTGTTGTATTATT TERM 2458 2359209 - 2359167 - T 100 -11.5 -4.57057 | opp_overlap 2359170, overlap 2359164 2359170 ACATTATAAAAACAA GAACCCCCATATGTTGA GCTCTCGTT TCAACATACGGGGGTTT TCATATTGTTGTATT TERM 2459 2359206 - 2359170 - T 100 -13.2 -4.36508 | opp_overlap 2359170, overlap 2359167 2359164 TTATAAAAACAAGAA CCCCCATATGTTGA GCTCTCGTT TCAACATACGGGGG TTTTCATATTGTTGT TERM 2460 2359170 - 2359206 + T 100 -11.7 -4.50841 | opp_overlap 2359170 2359167 2359164 TTATAAAAACAAGAA CCCCCATATGTTGAG CTCTCGT TTCAACATACGGGGG TTTTCATATTGTTGT SA2099 2360347 - 2359223 - | hypothetical protein TERM 2461 2359570 - 2359551 - G 77 -5.1 -5.02323 | overlap 2359546 CGACCATAAACAAAA GATTTGA GTGGTT TCAAATC ATAAATATTATGCAA TERM 2462 2360548 - 2360559 + r 74 -2.2 -5.5074 | opp_overlap 2360538, overlap 2360538 2360530 ATATAGCATATTTGA TGCT ATAT AGCG TTTTTTGTTAGGTTA TERM 2463 2360649 - 2360602 - R 95 -11.7 -3.42583 | gap 2, opp_overlap 2360611, overlap 2360591 2360603 2360611 CTAACACACTCAGAA TGCGCTAAAGGAGCTCGAAACAA TAAA TTGTTCC-AGCTCCTTTAA-GCA CCGATGTCTTATTTA TERM 2464 2360650 - 2360603 - R 100 -13.1 -2.65068 | opp_overlap 2360611, overlap 2360591 2360602 2360611 TAACACACTCAGAAT GCGCT-AAAGGAGCTCGAAACAA TAAA TTGTTCC-AGCTCCTTTAAGCAC CGATGTCTTATTTAT TERM 2465 2360611 - 2360641 + r 71 -7.7 -3.53563 | gap 1, opp_overlap 2360602 2360603 2360611 TCAGAATGCGCTAAA GGAGCTCGAAACAA TAAA TTGTTCC-AGCTCC TTTAAGCACCGATGT TERM 2466 2360641 - 2360611 - R 83 -9.9 -3.58533 | gap 1, opp_overlap 2360611, overlap 2360602 2360603 TCAGAATGCGCTAAA GGAGCTCGAAACAA TAAA TTGTTCC-AGCTCC TTTAAGCACCGATGT SA2100 2361434 - 2360658 - | hypothetical protein TERM 2467 2361873 - 2361838 - R 100 -10.8 -4.7373 | opp_overlap 2361865, overlap 2361871 TTATTCCATCAAAAA CACCCTTTTTAATTTT TACA AAAATTAAAAAAAGTG CTCCTACACTGCTTG TERM 2468 2361901 - 2361871 - R 95 -6.3 -5.85011 | gap 1, opp_overlap 2361865, overlap 2361838 CAAAAATTAAAAAAA GTGCTCCTACACTG CTTG CA-TGTAGAAACAC TTTTTCATTGTAATG SA2101 2362390 - 2361917 - | hypothetical protein SA2102 2365344 - 2362390 - | hypothetical protein TERM 2469 2363220 - 2363239 + g 73 -7.2 -3.92746 | GTTGAATACGACGTT CGGTATTT GTAA AAGTACCG TCTTTTTCAAGTGAA TERM 2470 2365818 - 2365861 + r 93 -11.2 -3.56056 | opp_overlap 2365818, overlap 2365814 AGGCATTAAATAAAA TAGCCCATAAATACAAAGTG TTAT CACCTTCTATTTACGGGCTA TTAGTTCTATTCGTT TERM 2471 2365861 - 2365818 - R 100 -15.6 -4.9448 | opp_overlap 2365818 2365814 AGGCATTAAATAAAA TAGCCCATAAATACAAAGTG TTAT CACCTTCTATTTACGGGCTA TTAGTTCTATTCGTT SA2103 2366894 - 2365947 - | hypothetical protein TERM 2472 2366115 - 2366139 + g 81 -7.4 -4.39318 | opp_overlap 2366118 CGTATTCAAATCACC TAATGTTAAA TCTGT TTTAACATTA TTTTGAATTTCATTC SA2104 2367824 - 2367027 - | hypothetical protein TERM 2473 2367433 - 2367444 + g 73 -4.4 -4.84359 | CCTTCTCCTCGTATT GCTT TATA AAGC TTTTTATGCGGATAA TERM 2474 2367947 - 2367925 - H 100 -9.2 -5.64274 | TTATGCATAAAAAAA TCGGCTAG TCACGTG CTAGCCGA CAAATAGAAAGGAAA SA2105 2368209 - 2368901 + | hypothetical protein TERM 2475 2368919 - 2368886 - T 100 -13.3 -3.61764 | gap 1, opp_overlap 2368886 TCATCAATTTTTAAA CCCCATCGATTCC-TA AAC TATGGAGTCGATGGGG TTTTATCTACGCATA TERM 2476 2368886 - 2368919 + T 100 -15.5 -4.53303 | gap 1, opp_overlap 2368886 TCATCAATTTTTAAA CCCCATCGATTCC-TA AAC TATGGAGTCGATGGGG TTTTATCTACGCATA SA2106 2369663 - 2368926 - | hypothetical protein SA2107 2369712 - 2370041 + | hypothetical protein TERM 2477 2370265 - 2370290 + F 81 -9.3 -3.57263 | opp_overlap 2370270 2370272, overlap 2370268 CAGTATGACTTACGG TAATATATCAA TATA TTGATATATTA TTTGCACATGGGAGT TERM 2478 2370268 - 2370287 + F 71 -6.6 -3.92542 | opp_overlap 2370270 2370272, overlap 2370265 TATGACTTACGGTAA TATATCAA TATA TTGATATA TTATTTGCACATGGG SA2108 2370486 - 2371358 + | hypothetical protein TERM 2479 2371542 - 2371496 - T 78 -6.2 -4.8048 | opp_overlap 2371493 2371496 2371540 TTCTTATATTAAAAA CAAACGCAGTTGATTACA-GGA TTCAT TCCATATA-TCAATTGCGTTTG TTATTTTAATAATGC TERM 2480 2371496 - 2371542 + T 72 -6.2 -4.27443 | opp_overlap 2371496, overlap 2371493 2371540 TTCTTATATTAAAAA CAAACGCAGTTGATTACA-GGA TTCAT TCCATATA-TCAATTGCGTTTG TTATTTTAATAATGC SA2109 2373124 - 2371745 - | hypothetical protein TERM 2481 2372908 - 2372886 - G 82 -10 -3.52896 | opp_overlap 2372886 GCAGGATGTATATAA TCACTTGCAA ATG TTGCAAATGA TCCTGTTGTAGGGTT SA2110 2373404 - 2373760 + | hypothetical protein SAS084 2373757 - 2373942 + | hypothetical protein SAS085 2374229 - 2374038 - | hypothetical protein SA2111 2374875 - 2374240 - | hypothetical protein SA2112 2375867 - 2374950 - | hypothetical protein SA2113 2376135 - 2376665 + | hypothetical protein TERM 2482 2376671 - 2376720 + T 95 -6.2 -5.86465 | gap 3, opp_overlap 2376675 2376678, overlap 2376678 TATATCATAATAAAA GACACAT--CTATACGATGATCATT TAC AATGATTG-CGTATAGTGATGTGTC TTTTTTTGTATTATT glvC 2378335 - 2376731 - | PTS system, arbutin-like IIBC component TERM 2483 2378492 - 2378508 + H 75 -4.5 -5.01732 | opp_overlap 2378502 TATAATCAGATTATC TTTTCAT ATA GTGAAAA TTTTTTCACGACCTT SA2115 2378665 - 2379429 + | hypothetical protein SA2116 2379993 - 2379487 - | hypothetical protein TERM 2484 2379557 - 2379545 - G 71 -7.7 -3.69092 | opp_overlap 2379553 AACATCAATTCGAAA CCATG CAC CATGG CATCATGATATTCTT SA2117 2381539 - 2380160 - | hypothetical protein TERM 2485 2381435 - 2381456 + g 73 -3.7 -5.04175 | opp_overlap 2381432 2381433, overlap 2381438 AAATAATAACAAGGG GAATAATGC CCAA GCATTGCTC TTTTTATGTACTTCC TERM 2486 2381534 - 2381501 - G 70 -4 -4.8622 | gap 1, opp_overlap 2381503, overlap 2381503 CTTTCCAATTAAAAA TACCTCTTTCTCACA AACGA TG-AAGAAAGAGGTT TTCATGTGCTTTACC TERM 2487 2381503 - 2381532 + g 72 -5.9 -4.40894 | gap 1, opp_overlap 2381501 2381503 TTCCAATTAAAAATA CCTCTTTC-TCA CAAACGA TGAAGAAAGAGG TTTTCATGTGCTTTA SA2118 2382267 - 2381698 - | hypothetical protein TERM 2488 2381920 - 2381938 + g 74 -6.1 -4.58303 | TAGACGCGTATTTTT TATACTG ATTCC CAGTATA TTTTCTAATATTTGA TERM 2489 2382660 - 2382633 - R 79 -7.8 -4.28045 | overlap 2382630 AGAGTATTAAAATAA GCCGATAAAGAT ACAC ACCTTTACCGAC TATTTAAAATACACT SA2119 2383635 - 2382754 - | hypothetical protein SA2120 2384867 - 2383746 - | hypothetical protein TERM 2490 2385097 - 2385130 + r 91 -9.7 -4.19947 | opp_overlap 2385097, overlap 2385124 TTACAAACCACAAAA GCTCTAAACATTAGT GTAA ACCAATGCTTAGAGC TTTCTAATTATTTTA TERM 2491 2385130 - 2385097 - R 100 -14.1 -4.64846 | opp_overlap 2385097 2385124 TTACAAACCACAAAA GCTCTAAACATTAGT GTAA ACCAATGCTTAGAGC TTTCTAATTATTTTA hutI 2386381 - 2385143 - | imidazolonepropionase TERM 2492 2386081 - 2386105 + g 74 -6.5 -4.27617 | opp_overlap 2386081, overlap 2386082 CACCCATTTCTAATA TTTCAAGGTAA GAC TTACCTTGACG TTTTAATGACATCTC hutU 2388042 - 2386381 - | urocanate hydratase TERM 2493 2388982 - 2388962 - g 90 -3.9 -5.84432 | TAGAATATAAAAAAA TTCGTCCAA ACT TAGGCCGAA AAATTTATATCAATT SA2123 2388202 - 2389086 + | hypothetical protein fosB 2389328 - 2389747 + | fosfomycin resistance protein FosB TERM 2494 2389903 - 2389866 - T 84 -8.6 -4.31608 | opp_overlap 2389865 2389866 AACAAACATAAATAA GCAGTAAGATGACT ACAACTTAAG AGTCTTCTTACTGC AATTATTTTTCAAAT TERM 2495 2389866 - 2389903 + T 70 -8.6 -2.54233 | opp_overlap 2389866, overlap 2389865 AACAAACATAAATAA GCAGTAAGATGACT ACAACTTAAG AGTCTTCTTACTGC AATTATTTTTCAAAT SA2125 2390938 - 2390003 - | formimidoylglutamase TERM 2496 2391266 - 2391278 + G 78 -7.7 -4.1523 | TTTTCAATGGGCAAT GACGA TTT TCGTC TTCTTTGTCATTACA TERM 2497 2392473 - 2392456 - g 95 -8.5 -5.15381 | AACATATCGAAAAAA CTGAAGA ACAA TCTTCAG ATAAAAACAAATAAT SA2126 2391228 - 2392487 + | hypothetical protein TERM 2498 2392495 - 2392536 + T 100 -16.1 -4.60143 | gap 1, opp_overlap 2392485 2392495 ACAAATAATAACAAA GCGCTTGCTAGTA-CCTCTT AAA AAGATGATGCTAGCAAGCGC TTTTCTATACTATAT TERM 2499 2392536 - 2392495 - T 100 -16.1 -4.64159 | gap 1, opp_overlap 2392495, overlap 2392485 ACAAATAATAACAAA GCGCTTGCTAGTACC-TCTT AAA AAGATGATGCTAGCAAGCGC TTTTCTATACTATAT SA2127 2393239 - 2392553 - | hypothetical protein SA2128 2393413 - 2394066 + | hypothetical protein SA2129 2395321 - 2394302 - | hypothetical protein SA2130 2395677 - 2395351 - | hypothetical protein TERM 2500 2395888 - 2395835 - R 100 -8.5 -5.88197 | gap 1, opp_overlap 2395835 2395861 CTAAATATAAAAAAA TAAGAGTAACACGCTTTCATCATCAT TTT AT-ATGATAAATGTGTGTCACTCTCA TCAATTTTATTTTTT SA2131 2397127 - 2395895 - | hypothetical protein TERM 2501 2396830 - 2396851 + g 82 -3.1 -5.73672 | overlap 2396822 2396832 GATTCACCTTGATAA TATAAGCTT TATC AAGTTTATG TTTTTTTACTTCTTT SA2132 2398019 - 2397120 - | hypothetical protein TERM 2502 2398240 - 2398215 - RH 86 -6.2 -5.42259 | opp_overlap 2398215 TTATTTGTAAAAAAA TATCCCAGCA TCATTG TGCCGAGATA TTTATATCATTACAA SA2133 2398870 - 2398250 - | hypothetical protein SAS086 2398862 - 2399053 + | hypothetical protein SA2134 2399269 - 2399877 + | hypothetical protein TERM 2503 2399932 - 2399969 + F 85 -4.8 -5.64274 | TATCTCCTTATAAGT CAATCAATCGTGCCGC CAACAT GCGGATGGGTTGATTG TTTTTTTGTCCATCA SA2135 2400210 - 2401418 + | hypothetical protein TERM 2504 2401468 - 2401431 - T 100 -21.7 -2.7213 | opp_overlap 2401435 2401440, overlap 2401435 2401440 TAAACACCAAACTCA TAAATAAAAGAGGAGGC CTCC GCCTCCTCTTTTATTTA TCCTCGATGTATATT TERM 2505 2401464 - 2401435 - T 100 -18.1 -4.03204 | opp_overlap 2401435 2401440, overlap 2401431 2401440 CACCAAACTCATAAA TAAAAGAGGAGGC CTCC GCCTCCTCTTTTA TTTATCCTCGATGTA TERM 2506 2401435 - 2401464 + T 100 -18.1 -3.98661 | opp_overlap 2401435 2401431 2401440, overlap 2401440 CACCAAACTCATAAA TAAAAGAGGAGGC CTCC GCCTCCTCTTTTA TTTATCCTCGATGTA TERM 2507 2401440 - 2401459 + T 100 -13.6 -5.02323 | opp_overlap 2401435 2401431 2401440, overlap 2401435 AACTCATAAATAAAA GAGGAGGC CTCC GCCTCCTC TTTTATTTATCCTCG TERM 2508 2401459 - 2401440 - T 100 -13.6 -5.01553 | opp_overlap 2401440 2401435, overlap 2401435 2401431 AACTCATAAATAAAA GAGGAGGC CTCC GCCTCCTC TTTTATTTATCCTCG fni 2402515 - 2401466 - | isopentenyl pyrophosphate isomerase SA2137 2403493 - 2402546 - | hypothetical protein SA2138 2403596 - 2404081 + | hypothetical protein SA2139 2404078 - 2404497 + | hypothetical protein TERM 2509 2404540 - 2404590 + T 78 -10.6 -2.66737 | opp_overlap 2404540, overlap 2404537 TTTTCAAAAACAAAA CCCAATTACGTTTTCATGTCAAAT ATC ATCTTGCATGAAATCGTAACTGGG TCAATTGTATGTTAT TERM 2510 2404590 - 2404540 - T 100 -12.8 -5.26119 | opp_overlap 2404540 2404537 TTTTCAAAAACAAAA CCCAATTACGTTTTCATGTCAAAT ATC ATCTTGCATGAAATCGTAACTGGG TCAATTGTATGTTAT SA2140 2405525 - 2404605 - | hypothetical protein SA2141 2405733 - 2406371 + | hypothetical protein TERM 2511 2406553 - 2406525 - T 93 -5.4 -6.08342 | gap 1 CAACAAATAAAAAAA GTATCGATAACCA TATT TGGC-ACCGATAC TTTAAAAATCATGTC SA2142 2408548 - 2406617 - | hypothetical protein TERM 2512 2407571 - 2407555 - G 77 -5.9 -4.74801 | opp_overlap 2407548 2407561 CAATCGTACTAAAAA TGATACC TGG GATATCA GCTTTAGGGTTTGTT SA2143 2409208 - 2408561 - | hypothetical protein TERM 2513 2409164 - 2409143 - G 81 -5.9 -4.99645 | ATTCCAGAAATAAAA GCCAGCAAT CCCA ATTGCTAAC AGTACAACAACCGTA SA2144 2409329 - 2409883 + | hypothetical protein TERM 2514 2410015 - 2409986 - T 90 -8 -5.1244 | opp_overlap 2409986 CTATCAATATAAAAA TGCCGAGATT TCCACATAAT AATCTCGGCA TTTTTATTTTTGATG TERM 2515 2409986 - 2410015 + T 95 -8 -5.65496 | opp_overlap 2409986 CTATCAATATAAAAA TGCCGAGATT TCCACATAAT AATCTCGGCA TTTTTATTTTTGATG tcaB 2411318 - 2410110 - | TcaB protein TERM 2516 2411541 - 2411493 - R 90 -7.9 -5.24129 | gap 2, opp_overlap 2411494 2411496, overlap 2411496 TTTTTTCACAAAAAA CAATCCCTTCAAAGTAATTCACA CTAAT TGTAAA-TACTTTGAAAGGA-TG TTGTTTGTATTCCAT TERM 2517 2411539 - 2411496 - R 100 -10.7 -4.72201 | gap 1, opp_overlap 2411496 2411494, overlap 2411493 TTTCACAAAAAACAA TCCCTTCAAAGTAATTCACA CTAAT TGTAAA-TACTTTGAAAGGA TGTTGTTTGTATTCC tcaA 2412969 - 2411587 - | TcaA protein TERM 2518 2413202 - 2413156 - R 70 -4.1 -4.95876 | gap 1 AATTATAACTAAAAA GAAGGTGTTCAATACATA CATATTTAGTCT TATAT-TTGAACACCTTC AAAAACCTATTTATG tcaR 2413664 - 2413209 - | TcaR transcription regulator SA2148 2413859 - 2414827 + | hypothetical protein TERM 2519 2414970 - 2414939 - T 70 -5.9 -4.30977 | opp_overlap 2414939 AATAAATAAACTAAA GCACGTCATCATT TTATAT AATAGTGACGCGC TTTTTTGTAAACCCA TERM 2520 2414939 - 2414970 + T 73 -3.7 -5.24129 | opp_overlap 2414939 AATAAATAAACTAAA GCACGTCATCATT TTATAT AATAGTGACGCGC TTTTTTGTAAACCCA SA2149 2415723 - 2415058 - | hypothetical protein SA2150 2416778 - 2415723 - | hypothetical protein SA2151 2416914 - 2417588 + | hypothetical protein SA2152 2417581 - 2418954 + | hypothetical protein TERM 2521 2418959 - 2418999 + F 82 -8.6 -3.97283 | gap 1 ATTCACATTAATCTC TACCTCCTGAAA-AAACAT TTCT GTTTTTATTTCAGGAGGTA TCTTTTATATTGATT SA2153 2419117 - 2419560 + | hypothetical protein SA2154 2419557 - 2420012 + | hypothetical protein TERM 2522 2420068 - 2420034 - T 90 -8 -5.2189 | opp_overlap 2420029 2420034 TTAACCACTAAAAAA CGGTAATGTCTATC ACATTAA AAAAGACATTACCG TTTCGTTTATTATTT TERM 2523 2420034 - 2420068 + T 77 -7.3 -4.28187 | opp_overlap 2420034, overlap 2420029 TTAACCACTAAAAAA CGGTAATGTCTAT CACATTAAA AAAGACATTACCG TTTCGTTTATTATTT SA2155 2421613 - 2420078 - | malate:quinone oxidoreductase TERM 2524 2421904 - 2421879 - R 100 -11.3 -5.96219 | opp_overlap 2421870 2421879 GATCCATAAAAAAAA GATGAGATGTT AGAA AACATCTCACC TTCTGTATATTTATA TERM 2525 2421879 - 2421904 + r 84 -9.1 -3.74615 | opp_overlap 2421879, overlap 2421870 GATCCATAAAAAAAA GATGAGATGTT AGAA AACATCTCACC TTCTGTATATTTATA SA2156 2423535 - 2421937 - | hypothetical protein SA2157 2423852 - 2425525 + | hypothetical protein TERM 2526 2425603 - 2425646 + T 88 -5.5 -5.53288 | opp_overlap 2425608, overlap 2425608 ACTTTAAAATACGCA AAAAACGGTAAACCCTA ATTCATATTA TAGAGTTTACCGTTTTA TTTTTTTAACTTGCA TERM 2527 2425641 - 2425608 - T 90 -7.6 -5.19916 | opp_overlap 2425603 2425608 AAAATACGCAAAAAA CGGTAAACCCTA ATTCATATTA TAGAGTTTACCG TTTTATTTTTTTAAC TERM 2528 2425608 - 2425641 + T 86 -5.4 -5.55855 | opp_overlap 2425608, overlap 2425603 AAAATACGCAAAAAA CGGTAAACCCTA ATTCATATTA TAGAGTTTACCG TTTTATTTTTTTAAC SA2158 2426293 - 2425679 - | hypothetical protein SA2159 2427122 - 2426607 - | hypothetical protein SA2160 2427313 - 2428317 + | hypothetical protein TERM 2529 2428353 - 2428331 - T 100 -9.9 -4.75372 | opp_overlap 2428331 AGTATTCATGAAAAA GACATCCCG TTATG CGAGATGTC TTTTTTAATTTAGTA TERM 2530 2428331 - 2428353 + T 95 -8.4 -5.40004 | opp_overlap 2428331 AGTATTCATGAAAAA GACATCCCGT TAT GCGAGATGTC TTTTTTAATTTAGTA SA2161 2428764 - 2428363 - | hypothetical protein SA2162 2429795 - 2428800 - | hypothetical protein TERM 2531 2430043 - 2429998 - R 86 -7.1 -5.16133 | opp_overlap 2429996 2429998 ATCACAATATAAAAA CACACCTTTCAAAGTAAGA AACAACAA TGTTCCTTTGAAAGATGTG TATATTTTTTAGTTC SA2163 2430498 - 2430067 - | hypothetical protein TERM 2532 2430686 - 2430645 - R 100 -11.1 -5.05113 | gap 1, opp_overlap 2430642 2430645 GCTATACAAATAAAA TAGCTATACCATGACGCTCG CTA CAAACGTCTTG-TATAGCTA TTATTTCTATTTATT TERM 2533 2430645 - 2430686 + r 74 -6.7 -4.31608 | gap 1, opp_overlap 2430645, overlap 2430642 GCTATACAAATAAAA TAGCTATACCATGACGCTCG CTA CAAACGTCTTG-TATAGCTA TTATTTCTATTTATT SA2164 2431982 - 2430705 - | hypothetical protein SA2165 2432143 - 2432766 + | hypothetical protein SA2166 2432812 - 2433756 + | hypothetical protein scrA 2435283 - 2433841 - | PTS system, sucrose-specific IIBC component TERM 2534 2434636 - 2434620 - G 70 -3.7 -5.00138 | overlap 2434622 TATGCAAACCAAAAA CATCCCA ATA TGGAATA GCCTTACCTGCTTCA SA2168 2435466 - 2435849 + | hypothetical protein TERM 2535 2439040 - 2439025 - g 73 -7.6 -3.75817 | opp_overlap 2439025, overlap 2439023 CTTGTACAACAAATA TGGTAG CCCC CTACCA TTAATGCATTTATAT SA2169 2437337 - 2439442 + | hypothetical protein SA2170 2439513 - 2439935 + | hypothetical protein TERM 2536 2440062 - 2440100 + F 100 -10.4 -4.788 | AATGTATTGTTTTTA GACACACTTTATTCACAT TTA ACGTGATTAGGGTGTGTC TTTTTAAATTAATTT SA2171 2440199 - 2440555 + | hypothetical protein TERM 2537 2440643 - 2440588 - T 100 -14.5 -3.27503 | gap 1, opp_overlap 2440594, overlap 2440594 GTAATATAGAAGATA TTAAAAGCAGCAGTAAGAT-GTTTTC TAATT GAAAATTATCTTACTGCTGCTTTTTA AGAATTACTGTGTCA TERM 2538 2440637 - 2440594 - T 100 -13.5 -4.44819 | gap 1, opp_overlap 2440594, overlap 2440588 TAGAAGATATTAAAA GCAGCAGTAAGAT-GTTTTC TAATT GAAAATTATCTTACTGCTGC TTTTTAAGAATTACT TERM 2539 2440594 - 2440637 + T 100 -15.7 -4.62872 | gap 1, opp_overlap 2440594 2440588 TAGAAGATATTAAAA GCAGCAGTAAGAT-GTTTTC TAATT GAAAATTATCTTACTGCTGC TTTTTAAGAATTACT TERM 2540 2440850 - 2440822 - T 100 -17.5 -4.42386 | opp_overlap 2440822 TGCGCATGCATAAAA GCCCCTAACAACC AAA GGTTGTAAGGGGC TTTAAATGTCAGATA TERM 2541 2440822 - 2440850 + T 100 -17.5 -3.71378 | opp_overlap 2440822 TGCGCATGCATAAAA GCCCCTAACAACC AAA GGTTGTAAGGGGC TTTAAATGTCAGATA gltT 2442150 - 2440873 - | proton/sodium-glutamate symport protein TERM 2542 2441266 - 2441285 + g 83 -7.2 -4.75219 | opp_overlap 2441247 2441260, overlap 2441264 AGAAGTAATTTCTTT TGGAGAAC CGAA GTTTTCCA TTTTCTTCATCATTA SA2173 2442697 - 2442332 - | hypothetical protein SA2174 2443094 - 2443540 + | hypothetical protein SA2175 2443762 - 2444184 + | hypothetical protein TERM 2543 2444206 - 2444260 + T 100 -16.3 -3.66999 | gap 2, opp_overlap 2444206 2444213, overlap 2444209 2444213 TTAAAATGAATACAC TACTAAAGCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGCTTT-GTA TTTAACTAAATGAAT TERM 2544 2444260 - 2444206 - T 89 -11.9 -2.55583 | gap 2, opp_overlap 2444206 2444209 2444213, overlap 2444213 TTAAAATGAATACAC TACTAAAGCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGCTTT-GTA TTTAACTAAATGAAT TERM 2545 2444209 - 2444258 + T 100 -16.9 -3.41569 | gap 1, opp_overlap 2444206 2444213, overlap 2444206 2444213 AAATGAATACACTAC TAAAGCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGCTTTG TATTTAACTAAATGA TERM 2546 2444254 - 2444213 - T 91 -11.1 -3.8448 | gap 1, opp_overlap 2444213 2444209 2444206, overlap 2444206 GAATACACTACTAAA GCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGC TTTGTATTTAACTAA TERM 2547 2444213 - 2444254 + T 100 -15.5 -4.35044 | gap 1, opp_overlap 2444206 2444213, overlap 2444209 2444206 GAATACACTACTAAA GCCTTAATGTCATGCTACGA ATA TTGT-GCATGATATTAAGGC TTTGTATTTAACTAA narK 2445460 - 2444291 - | nitrite extrusion protein TERM 2548 2445566 - 2445545 - H 78 -6.7 -4.67011 | opp_overlap 2445545 AATGTTATTTAAAAA TGCTTTCAT TTAT ATGAAAACA TTCAATATAGACAAA SA2177 2445829 - 2446743 + | hypothetical protein SA2178 2446722 - 2447462 + | hypothetical protein TERM 2549 2447699 - 2447651 - T 74 -8.4 -3.6135 | gap 1, opp_overlap 2447660, overlap 2447653 2447660 AAATATATTTCGAAA CA-TACAAAAGCGCCAGAAGATA ATCA TTTCCTCTCGCGCTTTTATACTG AATTATATTAATTTC TERM 2550 2447696 - 2447653 - T 93 -11.2 -3.37755 | opp_overlap 2447660, overlap 2447651 2447660 ATATATTTCGAAACA TACAAAAGCGCCAGAAGATA ATCA TTTCCTCTCGCGCTTTTATA CTGAATTATATTAAT TERM 2551 2447689 - 2447660 - T 82 -7.1 -4.74013 | opp_overlap 2447660, overlap 2447653 2447651 TCGAAACATACAAAA GCGCCAGAAGATA ATCA TTTCCTCTCGCGC TTTTATACTGAATTA SA2179 2448373 - 2447720 - | hypothetical protein SA2180 2449430 - 2448396 - | hypothetical protein SA2181 2449906 - 2449454 - | hypothetical protein narI 2450603 - 2449926 - | nitrate reductase gamma chain SA2183 2451171 - 2450596 - | hypothetical protein narH 2452723 - 2451164 - | nitrate reductase beta chain narH TERM 2552 2452618 - 2452640 + g 86 -8.4 -4.70659 | opp_overlap 2452607 ACCACATGTACTCAG CACCTGGACG ATT TGTCCAAGTG TTTTTACATGTCACA narG 2456402 - 2452713 - | respiratory nitrate reductase alpha chain TERM 2553 2453535 - 2453571 + g 90 -13.9 -3.12606 | opp_overlap 2453530 2453544 TGATAATTTACCATT CGTAGCAGATGAAATAC TTA GTATTGCATCTGCTACA TTACGTGCTGTATCA TERM 2554 2454342 - 2454352 + g 80 -6.8 -4.72188 | ATCCGGATCTTCTAT CGCA AAT TGCG TTTGTTTTGACTTAA TERM 2555 2456687 - 2456647 - R 70 -6.4 -4.1021 | gap 1, opp_overlap 2456647, overlap 2456650 TGGCACAACGACAAA TAAGGCTTCAACACGAA TATATTCT CTCG-GTTGAAACCTTA CTTATTCATTTATTT nasF 2457688 - 2456711 - | uroporphyrin-III C-methyl transferase nasE 2457993 - 2457679 - | assimilatory nitrite reductase nasD 2460402 - 2457997 - | nitrite reductase TERM 2556 2459327 - 2459339 + g 86 -4.9 -5.73339 | overlap 2459332 CCAACTACATTACCG TCTTT TAA AAAGA TTTTTTTATAGTTAT SA2189 2461199 - 2460468 - | hypothetical protein TERM 2557 2461291 - 2461276 - R 84 -9 -4.33151 | CATTATAATGTAAAA TCAGGG AATT CCCTGA TGCCTGTAGTCATGC TERM 2558 2461407 - 2461349 - R 100 -14.2 -4.01698 | opp_overlap 2461349 2461406 TTAAATCAAAAAAAG CGACCGATATATGAATCCCTACTCAA CATTTAT TTGAGCAAGCATCAATATATCGGTCG CTTGTAGTGTATATT SA2190 2461965 - 2461429 - | hypothetical protein TERM 2559 2461662 - 2461674 + g 73 -7.7 -3.79043 | opp_overlap 2461661 CATAAGTAAGTAATT GGCTA CCA TAGCC TTTCCCTTCATACTC TERM 2560 2462151 - 2462132 - R 90 -6.5 -5.53288 | opp_overlap 2462132 CTCAACGTAAAAAAA CCATTCA AATTCA TGAATGG TTTGGAAGAATGATT SA2191 2463023 - 2462199 - | hypothetical protein TERM 2561 2462535 - 2462521 - G 73 -7.2 -3.90048 | opp_overlap 2462528 2462529, overlap 2462519 2462529 CCTTTTGTAAAAATA TTCAAC CAT GTTGAA TCAACAGTCTTTTTC SA2192 2463422 - 2463240 - | hypothetical protein SA2193 2463973 - 2463506 - | hypothetical protein TERM 2562 2464145 - 2464108 - R 100 -10.7 -5.68438 | CTACGAAATAAAAAA CACACTCTATTCAGCTA TTAA CAGTTGAGTAGAGTGTG CAAACCTGTTGAATT SA2194 2465706 - 2464159 - | hypothetical protein TERM 2563 2465467 - 2465455 - G 71 -6.3 -4.12532 | CCCTGTATACATAAA CAAGT CTG ACTTG CTTGCACTTAATATA TERM 2564 2465946 - 2465913 - R 95 -6.2 -5.94214 | AATATAAGAAAAAAA GACAATCTCTATCA TATTGC TAATAGAAATTGCC TTTTCATATTGTCCT SA2195 2466267 - 2466001 - | hypothetical protein SA2196 2466518 - 2466267 - | hypothetical protein TERM 2565 2466737 - 2466704 - R 78 -6.2 -4.84527 | TTCATACATTAAAAA GACAATCTCTATCA TATCGC TAATAGAAATTGCC TTTTCATATTGTCCT SA2197 2467390 - 2466791 - | hypothetical protein SA2198 2467771 - 2467409 - | hypothetical protein TERM 2566 2467648 - 2467660 + g 71 -3.4 -5.10154 | overlap 2467635 CGTTGCCTTTTTTGG CAAG TTGTT CTTG TTTTTGATTTTGAAT fmhA 2468026 - 2469276 + | fmhA protein SA2200 2470104 - 2469373 - | hypothetical protein SA2201 2470595 - 2470101 - | hypothetical protein SA2202 2471580 - 2470801 - | hypothetical protein SA2203 2473140 - 2471701 - | hypothetical protein TERM 2567 2473000 - 2472989 - G 86 -5.8 -5.4833 | TTAGTCAATAAAAAA GCTG TTGT CAGC CATTGAACTTGTGTA TERM 2568 2473566 - 2473528 - R 100 -14.1 -3.16177 | opp_overlap 2473528 ACTTCACATATTTAA GAGCTGCATATACAC TCACTCCTT GTGTACATGCAGCTC TTTTTTTATAAGTAG TERM 2569 2473528 - 2473566 + r 100 -11.9 -5.64274 | opp_overlap 2473528 ACTTCACATATTTAA GAGCTGCATATACAC TCACTCCTT GTGTACATGCAGCTC TTTTTTTATAAGTAG SA2204 2474258 - 2473572 - | hypothetical protein TERM 2570 2474109 - 2474091 - G 73 -8.2 -3.62775 | overlap 2474105 AGCACGTGTTAATAA CGATGTAA AAG CTACATCG ATGGCAATGTTATTT TERM 2571 2474527 - 2474504 - R 100 -9.8 -5.055 | opp_overlap 2474502 CTAAGGTTTAAAAAA TATTTTTAGG TAAG CCTAAAAATA GATGTAATAAAAACG TERM 2572 2474574 - 2474541 - R 86 -7.5 -5.12068 | TAGATGTAATAAAAA CGCCTCCTCAGATAT TTAT ATATCTATGAAGACG TTTAAATACATTATA SA2205 2475451 - 2474585 - | hypothetical protein TERM 2573 2475622 - 2475649 + H 80 -8.6 -3.84364 | gap 1, overlap 2475623 TGTTAGAAAGGCTTA TGCATTAG-TAGC GAT GCTATCTAATGCG TTCCTTTATTTTCTG TERM 2574 2475623 - 2475648 + H 76 -9.9 -2.88991 | gap 1, overlap 2475622 GTTAGAAAGGCTTAT GCATTAG-TAGC GAT GCTATCTAATGC GTTCCTTTATTTTCT TERM 2575 2475711 - 2475725 + H 84 -8.6 -4.2074 | CTTCCTGTTTGTGAA CTTTCG CCT CGAAAG TTTCTATGTTGGGAC sbi 2476080 - 2477390 + | IgG-binding protein SBI TERM 2576 2477493 - 2477462 - f 82 -7.3 -4.73388 | opp_overlap 2477462 AACCGTGATTAAAAA GAACCGCTGATTC TCAATC GAATCTGTGGTTC TTTTTTTATTTTCCA TERM 2577 2477462 - 2477493 + F 100 -9.5 -6.09196 | opp_overlap 2477462 AACCGTGATTAAAAA GAACCGCTGATTC TCAATC GAATCTGTGGTTC TTTTTTTATTTTCCA hlgA 2477926 - 2478855 + | gamma-hemolysin chain II precursor TERM 2578 2478866 - 2478918 + F 73 -8.8 -3.06302 | opp_overlap 2478878, overlap 2478878 AGTAAACAGTTCAAT CATTTTAAAAAATCCTGGGACA CTTCATACT TGTCTCAGGATTTTTTAACATA TTGAATCAGCCTCAT TERM 2579 2478878 - 2478906 + F 83 -6.8 -5.09173 | opp_overlap 2478878, overlap 2478866 AATCATTTTAAAAAA TCCTGGGACA CTTCATACT TGTCTCAGGA TTTTTTAACATATTG TERM 2580 2478906 - 2478878 - f 75 -4.6 -5.07053 | opp_overlap 2478866 2478878 AATCATTTTAAAAAA TCCTGGGACA CTTCATACT TGTCTCAGGA TTTTTTAACATATTG TERM 2581 2479140 - 2479126 - f 70 -5.8 -4.31587 | opp_overlap 2479125 TCGTAAAAAGAACAA TTTGTA TTT TACAAA CATTAATTAAAAATA TERM 2582 2479173 - 2479159 - f 78 -4.2 -5.34655 | TAATTAAAAATAAAA GCAAGA CAT TCGTGC AATCGGTTACCTTAA hlgC 2479422 - 2480369 + | gamma-hemolysin component C hlgB 2480371 - 2481348 + | gamma-hemolysin component B TERM 2583 2481353 - 2481394 + T 100 -12.5 -3.27523 | gap 1, opp_overlap 2481358, overlap 2481358 ACAATAAATAGCTAG TAAAACACGGTCGCCAACAG TAA TTGT-GACGACCGTGTTTTG ATTTATTATCTTAGT TERM 2584 2481389 - 2481358 - T 100 -11.7 -4.31412 | gap 1, opp_overlap 2481353 2481358 AAATAGCTAGTAAAA CACGGTCGCCAACA GTAAT TGT-GACGACCGTG TTTTGATTTATTATC TERM 2585 2481358 - 2481389 + T 100 -10.2 -4.70353 | gap 1, opp_overlap 2481358, overlap 2481353 AAATAGCTAGTAAAA CACGGTCGCCAACAG TAA TTGT-GACGACCGTG TTTTGATTTATTATC SA2210 2481867 - 2481400 - | hypothetical protein SA2211 2482570 - 2481878 - | 6-carboxyhexanoate--CoA ligase SA2212 2483696 - 2482581 - | hypothetical protein bioB 2484681 - 2483674 - | biotin synthase bioA 2486041 - 2484683 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase bioD 2486705 - 2486019 - | dethiobiotin synthetase TERM 2586 2487093 - 2487058 - R 100 -15.7 -2.57239 | opp_overlap 2487062, overlap 2487062 AACATCTAAATATAC CAAATCCCCTCACTA TTGCCC TAGTGAGGGGATTTA TTTTGCTGTTGATTA TERM 2587 2487089 - 2487062 - R 100 -14.3 -3.97308 | opp_overlap 2487062, overlap 2487058 TCTAAATATACCAAA TCCCCTCACTA TTGCCC TAGTGAGGGGA TTTATTTTGCTGTTG TERM 2588 2487062 - 2487089 + r 100 -14.3 -4.77698 | opp_overlap 2487062 2487058 TCTAAATATACCAAA TCCCCTCACTA TTGCCC TAGTGAGGGGA TTTATTTTGCTGTTG SA2216 2488891 - 2487158 - | hypothetical protein SA2217 2490679 - 2488916 - | hypothetical protein TERM 2589 2488957 - 2488971 + g 73 -4.2 -4.84492 | AATCTTTTGTATGCA TGTGCG TAT CCCACA TTTTCTTATAATTAC TERM 2590 2491369 - 2491334 - H 100 -16.4 -2.57239 | opp_overlap 2491338, overlap 2491338 AACATCTAAATACAC CAAATCCCCTCACTAC TGCC ATAGTGAGGGGATTTA TTTAGGTGTTGGTTA TERM 2591 2491365 - 2491338 - H 100 -15 -3.97308 | opp_overlap 2491338, overlap 2491334 TCTAAATACACCAAA TCCCCTCACTAC TGCC ATAGTGAGGGGA TTTATTTAGGTGTTG TERM 2592 2491338 - 2491365 + H 100 -14.3 -4.49906 | opp_overlap 2491338 2491334 TCTAAATACACCAAA TCCCCTCACTA CTGCCA TAGTGAGGGGA TTTATTTAGGTGTTG SA2218 2491386 - 2491640 + | hypothetical protein SA2219 2492009 - 2491623 - | hypothetical protein SA2220 2492277 - 2493419 + | hypothetical protein TERM 2593 2493672 - 2493661 - g 70 -3.6 -4.89477 | TCTTGAAGAAGAAAA CGAG AAAT CCCG CCGTTCAAAAAAATG SA2221 2493479 - 2494138 + | hypothetical protein TERM 2594 2494171 - 2494229 + F 95 -8.3 -5.37043 | opp_overlap 2494171 ATGATAAACATTAAT TCCCTATACTTTATCTGTATCACTACG TTATT CGTGATGATGCATTAAGAGTATAGGGA TTTTTTATATAAACT SA2222 2494320 - 2495531 + | hypothetical protein TERM 2595 2495548 - 2495583 + T 100 -12 -4.11906 | opp_overlap 2495545 2495548 2495551, overlap 2495551 ACTTCAACATAATTA GAACCCTAGCAAAGAT ATCT ATCTTTGTCGGGGTTC TTCTTTATGAATTAT TERM 2596 2495583 - 2495548 - T 77 -9.8 -2.94561 | opp_overlap 2495548 2495551, overlap 2495545 2495551 ACTTCAACATAATTA GAACCCTAGCAAAGAT ATCT ATCTTTGTCGGGGTTC TTCTTTATGAATTAT TERM 2597 2495551 - 2495580 + T 77 -7.9 -4.16305 | opp_overlap 2495551 2495548 2495545, overlap 2495548 TCAACATAATTAGAA CCCTAGCAAAGAT ATCT ATCTTTGTCGGGG TTCTTCTTTATGAAT SA2223 2496127 - 2495654 - | hypothetical protein SA2224 2496240 - 2496896 + | hypothetical protein TERM 2598 2496918 - 2496888 - T 100 -9.1 -4.96427 | opp_overlap 2496892, overlap 2496884 CAACAACAAAATAAA CACACGTAAGTAA ACACA TTACTCGCGTGTG TAAAACATAAAATGC TERM 2599 2496924 - 2496963 + T 88 -8.8 -4.42743 | gap 1, opp_overlap 2496926 2496931, overlap 2496925 2496926 2496931 CTCGCGTGTGTAAAA CATAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTAAA TTTCTATTATTTGTA TERM 2600 2496925 - 2496962 + T 100 -12.3 -3.24019 | gap 1, opp_overlap 2496926 2496931, overlap 2496924 2496926 2496931 TCGCGTGTGTAAAAC ATAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTAA ATTTCTATTATTTGT TERM 2601 2496926 - 2496961 + T 100 -15.8 -2.52785 | gap 1, opp_overlap 2496926 2496931, overlap 2496925 2496924 2496931 CGCGTGTGTAAAACA TAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTA AATTTCTATTATTTG TERM 2602 2496961 - 2496926 - T 100 -15.8 -3.63744 | gap 1, opp_overlap 2496925 2496924 2496926 2496931, overlap 2496931 CGCGTGTGTAAAACA TAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTA AATTTCTATTATTTG TERM 2603 2496956 - 2496931 - T 100 -11.3 -4.89567 | gap 1, opp_overlap 2496926 2496925 2496924 2496931, overlap 2496926 GTGTAAAACATAAAA TGCGCAAA-CTG GGT CAGGTTTGCGCA TTTTAAATTTCTATT TERM 2604 2496931 - 2496956 + T 100 -11.3 -4.42081 | gap 1, opp_overlap 2496931 2496926, overlap 2496926 2496925 2496924 GTGTAAAACATAAAA TGCGCAAA-CTG GGT CAGGTTTGCGCA TTTTAAATTTCTATT SA2225 2497765 - 2496959 - | hypothetical protein TERM 2605 2498622 - 2498638 + GH 72 -6.6 -4.11623 | opp_overlap 2498637, overlap 2498637 TCAGTCACGGCGGCA TGTTCC CTGGA GGAACA TTTGGTTTCCTAATG SA2226 2498051 - 2499091 + | hypothetical protein TERM 2606 2499127 - 2499137 + GF 79 -5.4 -5.04356 | ACGTTACAACGTTAT CAAC TGT GTTG TTTTTAGTTGTTTGG SA2227 2499033 - 2499446 + | hypothetical protein TERM 2607 2499460 - 2499488 + F 100 -13.3 -5.76949 | AATTTAAACATCTCG CTCTAGTATCAGT TCA ACCGATACTAGAG TTTTTTTTGAAAATA TERM 2608 2500669 - 2500679 + G 74 -6.8 -4.31433 | CACCACCTTCTCGTG TGCG TTA CGCA TTTATTATGACGATG TERM 2609 2500981 - 2500967 - g 82 -4.3 -5.41787 | TAAAAAAGACAAAAA CGATA CAAAT TATCG CCCAGTATTAAACCA TERM 2610 2501336 - 2501352 + G 81 -8.1 -4.21933 | TCAAAAAATTATGCG TATTGTG AAT CACAATA TTATTTTACGCTTAA SA2228 2499585 - 2501663 + | hypothetical protein TERM 2611 2501728 - 2501681 - T 82 -10.8 -2.72916 | opp_overlap 2501682, overlap 2501680 2501678 AAGACATAACAATAC CCCCCATACATATGAGACAA AGTCATTA TCATCTCATATGTACGGGGT TTTTATATTCAACAT TERM 2612 2501682 - 2501727 + T 90 -7.7 -5.0916 | opp_overlap 2501681 2501680 2501678 AGACATAACAATACC CCCCATACATATGAGACAA AGTCATTA TCATCTCATATGTACGGGG TTTTTATATTCAACA TERM 2613 2501789 - 2501751 - T 100 -18.5 -5.27779 | opp_overlap 2501751 TTCAACATCAAAAAA TCGGATTGATGAAAAGT AAATA ACCTTTCATCAATCCGA TTTGATTATAGAATC TERM 2614 2501751 - 2501789 + T 100 -16.3 -4.00124 | opp_overlap 2501751 TTCAACATCAAAAAA TCGGATTGATGAAAAGT AAATA ACCTTTCATCAATCCGA TTTGATTATAGAATC SA2229 2503633 - 2501804 - | hypothetical protein SA2230 2503865 - 2505361 + | hypothetical protein TERM 2615 2505421 - 2505369 - T 90 -7.2 -5.62045 | gap 2, opp_overlap 2505369 AGACATAATAAAAAA GACTTGTTCGAGCCGTGCGTTTGATA ATA TATCAT-C-CACGATTCGACCAAGTC TTTATTCTTTGTATA TERM 2616 2505369 - 2505421 + T 81 -7.2 -4.65458 | gap 2, opp_overlap 2505369 AGACATAATAAAAAA GACTTGTTCGAGCCGTGCGTTTGATA ATA TATCAT-C-CACGATTCGACCAAGTC TTTATTCTTTGTATA SA2231 2506304 - 2505453 - | hypothetical protein TERM 2617 2506540 - 2506500 - R 81 -5.5 -5.20534 | ATCAATCAAGAAAAA CAGCACCAAGATCATTTCA ATT TGAAAGTACCTTACTGCTG TTCTTTATTTATTAC SA2232 2507561 - 2506626 - | 2-dehydropantoate 2-reductase SA2233 2509187 - 2507787 - | hypothetical protein TERM 2618 2509246 - 2509224 - R 70 -3.6 -5.05606 | TTTAAGAAAAACAAA TTTTTAATAT GAT ATATTAAGAA ACAATATCATAAATT TERM 2619 2509426 - 2509391 - R 100 -9.9 -4.93318 | opp_overlap 2509389 2509391 2509418 CACAACCTATAAAAA GGCTACTCAAAGA TTATTTGAGC TCCTTGAGTAGCC TCATTTTTTATAAAT TERM 2620 2509391 - 2509426 + r 71 -7.7 -3.45403 | opp_overlap 2509391, overlap 2509389 2509418 CACAACCTATAAAAA GGCTACTCAAAGA TTATTTGAGC TCCTTGAGTAGCC TCATTTTTTATAAAT TERM 2621 2509418 - 2509429 + r 75 -4.4 -5.28778 | opp_overlap 2509391, overlap 2509391 2509389 ATTATTTGAGCTCCT TGAG TAGC CTCA TTTTTTATAAATCAT opuCD 2510176 - 2509481 - | glycine betaine/carnitine/choline ABC transporter opuCD opuCC 2511117 - 2510176 - | glycine betaine/carnitine/choline ABC transporter opuCC opuCB 2511769 - 2511134 - | glycine betaine/carnitine/choline ABC transporter opuCB opuCA 2512998 - 2511766 - | glycine betaine/carnitine/choline ABC transporter opuCA TERM 2622 2513399 - 2513371 - R 71 -7.7 -3.46106 | overlap 2513369 CGAAAATGTGAAATA TTATTACAAAAGT CGA ATTTTTGTAATAA TGCACACGCATCCAT TERM 2623 2513610 - 2513585 - R 100 -10.5 -5.51402 | opp_overlap 2513585 ACACACCTAAAAAAA CAACCAACAGC ATGA GCCATTGGTTG TTTCGTGTCATCTTG SA2238 2514261 - 2513662 - | hypothetical protein SA2239 2514441 - 2516078 + | hypothetical protein TERM 2624 2516127 - 2516155 + F 81 -2.5 -5.79595 | gap 1, opp_overlap 2516127 ACACACACACATTAA CCAACCATTGAT TTCAAC ATCT-TGGTTGG TTTTTTATTTTGAAA TERM 2625 2516780 - 2516764 - g 74 -5.9 -4.48072 | opp_overlap 2516764 ACATTTAGTACAAAA TAACGAC ATT ATCGTTA TTACATGCAATTATC TERM 2626 2517548 - 2517568 + G 81 -7.7 -4.4078 | CACTATCGCAGTGCT TACCATATT CTA GATATGGTA TTTTGGTTCGGAAAC SA2240 2516387 - 2517739 + | hypothetical protein TERM 2627 2517786 - 2517759 - T 81 -6.3 -5.09225 | opp_overlap 2517759 ATCGCATCTAAAAAA GCACACCTG AATTTGATAG CAGGCGTGC TTTTCATATGAGAAT SA2241 2518988 - 2517801 - | hypothetical protein TERM 2628 2519067 - 2519055 - R 81 -6.3 -5.1675 | opp_overlap 2519054 2519055 CGATTTATTAAAAAA TGTGT GCA ACACA ATTTTATATATAACC TERM 2629 2519280 - 2519229 - R 100 -9.7 -5.01732 | gap 1, opp_overlap 2519229 2519228 AATGTCTTCAAAAAA GCACGCACGCTTTATATGTCAG AACAGATAA CTGAC-TACAAAGTATGCGTGC CTTTATGAATATTTT SA2242 2520160 - 2519384 - | hypothetical protein TERM 2630 2519554 - 2519541 - G 73 -8.1 -3.54459 | TTAATCGCTTGTAAA GGTGG TACG CCACC AATAATTAAGCCTGT SA2243 2520815 - 2520153 - | hypothetical protein SA2244 2522139 - 2521063 - | hypothetical protein TERM 2631 2522434 - 2522392 - R 79 -5.7 -5.1417 | gap 1 TTATAAAATTAAAAA GTGTAGAGATAACAACG-CA TTAA CGTCGCTATTTTCCCTACAC TTAAATACTAGTTTC SA2245 2522760 - 2522494 - | hypothetical protein SA2246 2523017 - 2522760 - | hypothetical protein SA2247 2523376 - 2523831 + | hypothetical protein TERM 2632 2523897 - 2523847 - T 75 -4.9 -5.1523 | gap 2, opp_overlap 2523848, overlap 2523848 TTTATAACATAAAAA TGCCCTCAGA-TAAG-ACTAAGGAT ACA AACCTTAATTCATATTCTGAGGGCT TTAATATTTGAAATT TERM 2633 2523896 - 2523848 - T 74 -8.4 -3.68053 | gap 2, opp_overlap 2523848, overlap 2523847 TTATAACATAAAAAT GCCCTCAGA-TAAG-ACTAAGGAT ACA AACCTTAATTCATATTCTGAGGGC TTTAATATTTGAAAT SA2248 2525576 - 2523999 - | hypothetical protein TERM 2634 2525652 - 2525678 + H 75 -4.6 -5.10154 | ACAATGGAAGCGCTT CATTTTATAAAA CAA TTTTATGATATG TTTTTCATTTTAAAT SA2249 2525771 - 2526520 + | hypothetical protein TERM 2635 2526562 - 2526603 + T 100 -11.8 -4.48299 | opp_overlap 2526562 CATACACATCAAAAA GCACACTTAAAAGTCAGT ATCACA ACTCACTTTTAAGCGTGC TTTATTTAGATATAC TERM 2636 2526603 - 2526562 - T 100 -14 -4.86133 | opp_overlap 2526562 CATACACATCAAAAA GCACACTTAAAAGTCAGT ATCACA ACTCACTTTTAAGCGTGC TTTATTTAGATATAC SAS087 2526794 - 2526669 - | hypothetical protein TERM 2637 2526718 - 2526730 + g 88 -7.7 -5.1925 | opp_overlap 2526717 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SA2250 2528075 - 2526882 - | hypothetical protein TERM 2638 2527351 - 2527332 - G 76 -6.4 -4.59773 | CTGTATTGTCAAAAA GATTCCCG CATT CGCGAATC CTAAACTCACTGTGT opp-1F 2528836 - 2528087 - | oligopeptide transporter ATPase subunit opp-1D 2529644 - 2528829 - | oligopeptide transporter ATPase subunit opp-1C 2530510 - 2529641 - | oligopeptide transporter permease TERM 2639 2530018 - 2530004 - G 79 -8.6 -3.72893 | GATTGTTTTAGCAAA TCTGAC ATG GTCAGA AGCAGTGTACTGCAT opp-1B 2531442 - 2530507 - | oligopeptide transporter permease TERM 2640 2531057 - 2531020 - G 85 -9.3 -3.93583 | gap 1, opp_overlap 2531019 2531020, overlap 2531024 TAATGCAGTTAGAAA GAAAGC-CACTGAACGTA TCG CACGATCAGTGAACTTTC CTCTTTTTAATGCAC opp-1A 2533053 - 2531455 - | oligopeptide transporter substrate binding protein TERM 2641 2531583 - 2531599 + g 70 -3.7 -4.84761 | opp_overlap 2531586, overlap 2531586 AGATACCTTCATCAT CAATTTG TTT CAAAATG TTTTTATAAGCGTCT SA2256 2534497 - 2533196 - | hypothetical protein TERM 2642 2533437 - 2533454 + g 73 -4.2 -4.87786 | GGCATTCTTGGAATT TGAACA ACATCC TGTTCA TTTTTATAGACTTGC TERM 2643 2534360 - 2534374 + g 80 -6.4 -4.82678 | TTTCTCTTTTTTATA CGCTTG ATA TAAGCG TTTTGATTTTTCTGA SA2257 2535308 - 2534490 - | hypothetical protein SA2258 2536140 - 2535319 - | hypothetical protein TERM 2644 2536415 - 2536446 + r 74 -8.8 -3.23538 | gap 1, opp_overlap 2536415, overlap 2536403 CCATCTATTAGGTAA GTCATGCTAATCCGC ATA GTGGAA-AGCATGAC TTAGTAATCGGTTGT TERM 2645 2536602 - 2536626 + r 77 -8.7 -3.6018 | opp_overlap 2536603 2536607, overlap 2536603 2536607 AAAAAGTTGCAGAAA ACAAATCGTAA CTA TTACGATTTGA TTATATACTATATTA TERM 2646 2536603 - 2536625 + r 100 -12.2 -2.75385 | opp_overlap 2536603 2536607, overlap 2536602 2536607 AAAAGTTGCAGAAAA CAAATCGTAA CTA TTACGATTTG ATTATATACTATATT TERM 2647 2536625 - 2536603 - R 100 -12.2 -4.41844 | opp_overlap 2536602 2536603 2536607, overlap 2536607 AAAAGTTGCAGAAAA CAAATCGTAA CTA TTACGATTTG ATTATATACTATATT TERM 2648 2536621 - 2536607 - R 82 -7.2 -4.77173 | opp_overlap 2536603 2536602 2536607, overlap 2536603 GTTGCAGAAAACAAA TCGTAA CTA TTACGA TTTGATTATATACTA TERM 2649 2536607 - 2536621 + r 75 -7.2 -4.05245 | opp_overlap 2536607 2536603, overlap 2536603 2536602 GTTGCAGAAAACAAA TCGTAA CTA TTACGA TTTGATTATATACTA TERM 2650 2536794 - 2536764 - R 100 -10.6 -5.99154 | opp_overlap 2536764 2536767 TATCAAACAAAAAAA CCAGCTTCAACGTA AAA TACGTTAAAACTAG CTTTAAGCAATACAC SA2259 2537597 - 2536830 - | hypothetical protein SA2260 2538515 - 2537697 - | short chain dehydrogenase TERM 2651 2539106 - 2539118 + G 71 -3.3 -5.0925 | GATTTCTGTTGTGAA TCGCG CAC CACGA TTTTTAATTTTACCG SA2261 2538750 - 2540288 + | hypothetical protein TERM 2652 2540312 - 2540351 + T 74 -6.5 -4.3767 | opp_overlap 2540315, overlap 2540313 2540315 AAAGGGATAAATTAA AAATGCCACTATACAAG ATTTGA CCTGTATAGTGGCATGA TTTGTTATGATATAG TERM 2653 2540313 - 2540350 + T 80 -10 -3.21879 | opp_overlap 2540315, overlap 2540312 2540315 AAGGGATAAATTAAA AATGCCACTATACAAG ATTTGA CCTGTATAGTGGCATG ATTTGTTATGATATA TERM 2654 2540348 - 2540315 - T 100 -14.8 -5.04601 | opp_overlap 2540313 2540312 2540315 GGGATAAATTAAAAA TGCCACTATACAAG ATTTGA CCTGTATAGTGGCA TGATTTGTTATGATA TERM 2655 2540315 - 2540348 + T 100 -12.6 -3.16079 | opp_overlap 2540315, overlap 2540313 2540312 GGGATAAATTAAAAA TGCCACTATACAAG ATTTGA CCTGTATAGTGGCA TGATTTGTTATGATA SA2262 2540823 - 2540401 - | hypothetical protein TERM 2656 2541290 - 2541264 - R 79 -5.9 -5.02715 | opp_overlap 2541268, overlap 2541268 AGATTAAATCAAAAA TAAAGAAGACC CTAGT GGCCTTCTTTT TTGTCTAATTCTTCT TERM 2657 2541286 - 2541268 - R 82 -6.7 -5.00388 | opp_overlap 2541268, overlap 2541264 TAAATCAAAAATAAA GAAGACC CTAGT GGCCTTC TTTTTTGTCTAATTC TERM 2658 2541268 - 2541286 + r 81 -4.5 -5.42131 | opp_overlap 2541268 2541264 TAAATCAAAAATAAA GAAGACC CTAGT GGCCTTC TTTTTTGTCTAATTC SA2263 2541694 - 2541275 - | hypothetical protein SA2264 2542131 - 2541721 - | hypothetical protein TERM 2659 2542385 - 2542407 + r 74 -6.3 -4.43351 | gap 1, opp_overlap 2542385, overlap 2542382 AAAACAAAATTAAAA CGGCCGCATA GTTT TA-GCGGTCG TTCTTTTTAGACTCT SA2265 2542910 - 2542398 - | hypothetical protein SA2266 2543765 - 2543070 - | hypothetical protein SA2267 2544054 - 2544335 + | hypothetical protein TERM 2660 2544450 - 2544427 - T 89 -10.3 -3.82433 | opp_overlap 2544427, overlap 2544416 ATAAGTATGACTAAA GCCACATCC AATATA GGACGTGGC TTTTAGTATCGTTCC TERM 2661 2544427 - 2544450 + T 85 -8.1 -4.39287 | opp_overlap 2544427 2544416 ATAAGTATGACTAAA GCCACATCC AATATA GGACGTGGC TTTTAGTATCGTTCC SA2268 2544786 - 2544595 - | hypothetical protein TERM 2662 2545015 - 2545062 + r 100 -8.7 -5.46657 | gap 1, opp_overlap 2545015 CTTTAGACATTAAAA GCTTCTAACATGATAC-GGAAT ATGAG GTTCCTGTATCACATTAGAAGC TTTTTTGTTGCGGTG TERM 2663 2545062 - 2545015 - R 100 -12.4 -4.39166 | gap 1, opp_overlap 2545015 CTTTAGACATTAAAA GCTTCTAACATGATAC-GGAA TATGAGG TTCCTGTATCACATTAGAAGC TTTTTTGTTGCGGTG SA2269 2546141 - 2545347 - | hypothetical protein TERM 2664 2546038 - 2546052 + g 77 -5.6 -4.98911 | AATGTGTCTTTAATT TGGGCG TTT CGACCA TTTGTTTTTGTCATA TERM 2665 2546537 - 2546507 - R 100 -7.8 -6.04324 | opp_overlap 2546506 CCAAAAAATAAAAAA GAAGTTAAACAA AGATTGG TTGCTTAACTTC CATTATTGAATTCAT TERM 2666 2546597 - 2546585 - R 82 -7.7 -4.41633 | opp_overlap 2546584 2546585, overlap 2546582 GATCCCGAAAAATAA TGGCT AAT AGCCA CTTATAGTCGAGATT SA2270 2546964 - 2546677 - | hypothetical protein SA2271 2547293 - 2546967 - | hypothetical protein TERM 2667 2547211 - 2547233 + g 84 -6.4 -5.12172 | opp_overlap 2547205 2547210, overlap 2547214 CTTAATTCATCAATT TGATTGAATG CAT CATTCAATTG TTTTCTTTCTTCATC TERM 2668 2547214 - 2547230 + g 84 -8.1 -4.62561 | opp_overlap 2547205 2547210, overlap 2547211 AATTCATCAATTTGA TTGAATG CAT CATTCAA TTGTTTTCTTTCTTC SA2272 2548618 - 2547293 - | hypothetical protein TERM 2669 2547490 - 2547507 + g 75 -8.5 -3.35832 | opp_overlap 2547493, overlap 2547489 2547493 TTCTTAATTCATCTA TAACCTC TTCA GAGGTTA ATTTTTCACCAATTT SA2273 2549399 - 2548605 - | hypothetical protein TERM 2670 2548776 - 2548790 + g 70 -3.6 -4.84262 | overlap 2548777 AGGTGCCCTTTTGGT TGATAT ATC ATATCG TTTTCTTAATTGTTG TERM 2671 2549262 - 2549286 + g 77 -8.8 -3.62354 | opp_overlap 2549264 2549266, overlap 2549260 2549255 ATTCTTGGTTGGATA CACATTTAAT GTTTG ATTAAATGTG TCTTTAATTTGGGCA TERM 2672 2549476 - 2549464 - R 71 -4.9 -4.83759 | AACTAAAGCGAAAAA TTGTT TTG AACAA ATGAATTTAATTGTA SA2274 2550416 - 2549643 - | hypothetical protein SA2275 2551304 - 2550528 - | hypothetical protein SA2276 2553098 - 2551608 - | hypothetical protein SA2277 2554469 - 2553138 - | hypothetical protein TERM 2673 2554344 - 2554359 + g 76 -2.6 -5.39905 | TTCATCTATAATTGT TGAAAG GACT TTTTCA TTTTTATTATTTACT SA2278 2554863 - 2554471 - | hypothetical protein TERM 2674 2554844 - 2554830 - G 76 -3.6 -5.31275 | TGTTATCAGAAAAAA TAATAG CTC CTACTA CATTGATTACTTTTT TERM 2675 2555835 - 2555857 + G 72 -9.2 -2.66106 | overlap 2555834 2555831 TTCACTAGTTTGCAT GGTACAAGTG TTC CAATTGTACC TGAGTTATTAAAATC SA2279 2555052 - 2556803 + | hypothetical protein SA2280 2557087 - 2557353 + | hypothetical protein SA2281 2557497 - 2557805 + | hypothetical protein TERM 2676 2557901 - 2557874 - T 100 -8.6 -5.40072 | opp_overlap 2557874, overlap 2557876 TGTTTGCGAAAAAAA TACAACCTTGTA CGAA TACAAAGTTGCA TTAATATAGAATCAT TERM 2677 2557899 - 2557876 - T 84 -9 -4.34482 | opp_overlap 2557874, overlap 2557874 TTTGCGAAAAAAATA CAACCTTGTA CGAA TACAAAGTTG CATTAATATAGAATC SA2282 2558146 - 2557913 - | hypothetical protein SA2283 2559319 - 2558243 - | hypothetical protein TERM 2678 2559617 - 2559573 - R 84 -6.6 -5.21236 | gap 1, opp_overlap 2559573 2559575 2559578 AATTTATAACAAAAA TACACCCCTTAAAGTTAGGTC TTTC AATCCAACTTTT-GGGGTGTA TATCATTCTCATCAT TERM 2679 2559695 - 2559709 + r 70 -5.8 -4.30719 | opp_overlap 2559694 TATTATTTAAATTAT GAATTA TTT TAATTC TTTCTTCTACGAGCC TERM 2680 2560213 - 2560226 + r 74 -3.1 -5.40464 | opp_overlap 2560199 ACGTTTTGTTTCAAA CGGTA TCTC TACTG TTTTTGTTTCTGGTG TERM 2681 2560477 - 2560489 + r 71 -3.4 -5.27779 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGC TERM 2682 2560861 - 2560873 + r 71 -3.4 -5.27779 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGC TERM 2683 2561245 - 2561257 + r 71 -3.4 -5.28683 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGT TERM 2684 2561629 - 2561641 + r 71 -3.4 -5.22312 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTCGGT TERM 2685 2562013 - 2562025 + r 71 -3.4 -5.28683 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGT TERM 2686 2562397 - 2562409 + r 71 -3.4 -5.28683 | TTTACTAATAATTTC TCCA GTTAA TGGA TTTTTTAGTGTTGGT SA2285 2563817 - 2562483 - | hypothetical protein TERM 2687 2563163 - 2563176 + g 72 -2.5 -5.32944 | AATTGAAATCCTTAC TAAAA TCTA TTTTA TTTTTTAATTGTAAA TERM 2688 2563249 - 2563263 + g 78 -2.1 -5.76633 | GTTACCTCTGATACC CCTAA ATCTG TTGGG TTTTTTTGTATATCA TERM 2689 2563983 - 2563965 - R 71 -7.6 -3.51545 | opp_overlap 2563965, overlap 2563958 TAAAACAATCTACAA CTAAAAAT ATT ATTTTTAG TTTTCAATGAATAAT TERM 2690 2563965 - 2563983 + r 79 -7.6 -4.20084 | opp_overlap 2563965 2563958 TAAAACAATCTACAA CTAAAAAT ATT ATTTTTAG TTTTCAATGAATAAT TERM 2691 2564101 - 2564060 - R 83 -3.2 -5.79595 | TTCTAAAATAAAAAA TACCTTAACGCATTTAAA AATACA TTTAACTGCACCAAGATA TTAAAATCTCGAAAC TERM 2692 2564112 - 2564130 + r 71 -9 -2.73513 | opp_overlap 2564110 2564116, overlap 2564111 2564116 AGATATTAAAATCTC GAAACATA CTT TATGTTTC ATTAATATTTATTTC sarT 2564481 - 2564122 - | hypothetical protein sarH2 2564802 - 2565545 + | hypothetical protein gtaB 2566622 - 2565756 - | UTP-glucose-1-phosphate uridyltransferase TERM 2693 2566798 - 2566828 + r 72 -4.7 -4.9041 | gap 1 GAGTTTTTATTATTA GGCGGCC-AGTCCA TTAT TGGGCTTGGTTGTC TTCTTTTTTTCTCCT tnp 2568114 - 2566795 - | transposase TERM 2694 2568215 - 2568194 - R 82 -4.4 -5.52384 | overlap 2568197 TGTGTATTAAAAAAA GCAGGAAG TTTTAC CTTCCCAC CATAAAATATGAAGA TERM 2695 2568307 - 2568273 - R 100 -11.7 -5.47399 | opp_overlap 2568273 TTAATTTTAAAAAAA CAGGTTTACTTCATA TAATT TATGAAATAAACCCG TCAATTTTTGTTTAA fnbB 2571208 - 2568323 - | hypothetical protein TERM 2696 2569484 - 2569511 + g 83 -8 -4.39568 | gap 1, opp_overlap 2569492, overlap 2569492 TGTATCCTCTTCATA TTCAACAACATCA GCG TGATGTT-TTGAA TTTTCATGTGTAGAT TERM 2697 2569492 - 2569504 + g 74 -6.3 -4.44277 | opp_overlap 2569492, overlap 2569484 CTTCATATTCAACAA CATCA GCG TGATG TTTTGAATTTTCATG TERM 2698 2571873 - 2571839 - R 100 -11.7 -5.53288 | opp_overlap 2571839 TTTAATCTAAAAAAA CAGGTTTACTTCATA TAATT TATGAAATAAACCCG TCAATTTTTGTTTAA fnb 2575005 - 2571889 - | hypothetical protein TERM 2699 2573134 - 2573161 + g 83 -8 -4.39568 | gap 1, opp_overlap 2573142, overlap 2573142 TGTATCCTCTTCATA TTCAACAACATCA GCG TGATGTT-TTGAA TTTTCATGTGTCGAT TERM 2700 2573142 - 2573154 + g 74 -6.3 -4.44277 | opp_overlap 2573142, overlap 2573134 CTTCATATTCAACAA CATCA GCG TGATG TTTTGAATTTTCATG TERM 2701 2574291 - 2574269 - G 73 -9.4 -2.85508 | overlap 2574266 GAAACCCCATAAGTA TTTACATTAT TTG ATAATGTAAA ATCAAAATAATCTCC SA2292 2575340 - 2575140 - | hypothetical protein TERM 2702 2575195 - 2575220 + g 76 -2.7 -5.4111 | gap 1, opp_overlap 2575199 2575200, overlap 2575196 2575199 2575200 GTATTCAAGTCATCA TA-AACCCTTGT CAC ACAAGGCTTGTA TTTTTTATACTTATT TERM 2703 2575214 - 2575200 - G 71 -8.6 -2.99161 | opp_overlap 2575200 2575199 2575196 2575195, overlap 2575199 CAAGTCATCATAAAC CCTTGT CAC ACAAGG CTTGTATTTTTTATA TERM 2704 2575200 - 2575214 + g 71 -8.6 -3.12405 | opp_overlap 2575199 2575200, overlap 2575199 2575196 2575195 CAAGTCATCATAAAC CCTTGT CAC ACAAGG CTTGTATTTTTTATA TERM 2705 2575461 - 2575414 - R 100 -10.2 -4.82901 | opp_overlap 2575414 2575413 2575418, overlap 2575418 TTTTCTGCATAAAAA TAAACGTGTTTCAAGGCAAT ATATTGCA ATTACCTAAAAACACGTTTA CTTAATATTTAGTTA TERM 2706 2575457 - 2575418 - R 82 -6.6 -4.96501 | opp_overlap 2575418 2575414 2575413, overlap 2575414 CTGCATAAAAATAAA CGTGTTTCAAGGCAAT ATATTGCA ATTACCTAAAAACACG TTTACTTAATATTTA gntP 2576832 - 2575474 - | gluconate permease gntK 2578502 - 2576949 - | gluconokinase gntR 2579206 - 2578526 - | gluconate operon transcriptional repressor TERM 2707 2579230 - 2579249 + r 78 -9.4 -3.35176 | opp_overlap 2579227 2579230 2579232 2579234 TCCTTCATTACATGA CATACTTG TATA CAAGTATG TTAATATAGTTCTTA TERM 2708 2579249 - 2579230 - R 73 -9.4 -2.66316 | opp_overlap 2579230, overlap 2579227 2579232 2579234 TCCTTCATTACATGA CATACTTG TATA CAAGTATG TTAATATAGTTCTTA SA2296 2580123 - 2579359 - | hypothetical protein SA2297 2580980 - 2580288 - | hypothetical protein SA2298 2581699 - 2581211 - | hypothetical protein SA2299 2583589 - 2581766 - | hypothetical protein TERM 2709 2584056 - 2584024 - R 81 -6.3 -5.15969 | TTTCAACGTAAAAAA GCAATAAGCCCCAAC AAT GTGAAAGCTTACTGC TTGTTTAAATTATTT SA2300 2585343 - 2584066 - | hypothetical protein SA2301 2585890 - 2586501 + | hypothetical protein TERM 2710 2586551 - 2586588 + F 73 -3.6 -5.25805 | gap 1, opp_overlap 2586551 TTCTATACACAAAAA GCAGTAAAATCATTCCA TCTAT TGAAATGATTC-ACTGC TTTTTTAAGTTTATT TERM 2711 2586588 - 2586551 - f 90 -8 -5.03994 | gap 1, opp_overlap 2586551 TTCTATACACAAAAA GCAGTAAAATCATTCCA TCTAT TGAAATGATT-CACTGC TTTTTTAAGTTTATT SA2302 2587019 - 2587714 + | hypothetical protein SA2303 2587716 - 2588486 + | hypothetical protein TERM 2712 2588551 - 2588578 + F 85 -4.8 -5.61596 | opp_overlap 2588551 AAAATCATTTTCAAA TCCCTTCACC CAAATAAT GGTGCGGGGA TTTTTTTATCCAAAT TERM 2713 2590101 - 2590117 + G 75 -8.1 -3.85704 | AAAGGTTCGCTTTAC TTACCAT ATA ATGGTAA TTTACTCATTCATGG TERM 2714 2590776 - 2590764 - g 71 -7.7 -3.61328 | ACCAATATTGGTAAA GAGCT TCA AGCTC AAATAGATATTTTGA fbp 2588859 - 2590823 + | fructose-bisphosphatase TERM 2715 2590957 - 2590929 - f 100 -14.7 -5.50499 | opp_overlap 2590929 2590954 CTACACCGAAAAAAA TCCCCTCACTATT GCG AGTAGTGAGGGGA TTGGTGTATCTATGC TERM 2716 2590929 - 2590957 + F 100 -16.9 -3.36655 | opp_overlap 2590929, overlap 2590954 CTACACCGAAAAAAA TCCCCTCACTATT GCG AGTAGTGAGGGGA TTGGTGTATCTATGC TERM 2717 2591093 - 2591081 - f 71 -4.9 -4.72029 | opp_overlap 2591081 TTCAATTTAACAAAA TACTA TAT TAGTA CTATATTTTTCATTA TERM 2718 2591596 - 2591608 + G 88 -7.7 -4.87893 | AATTGCTGTGCTTGG TGGAG TTA CTCCA TTTTTAATTGCAATT SA2305 2591165 - 2592244 + | hypothetical protein TERM 2719 2592333 - 2592294 - T 100 -10.2 -5.46698 | gap 1, opp_overlap 2592294 TTCAAAATCAAAAAA GCGGGCAGATG-AAAAG TAAAAAT CTTTTCCATCTGTCCGC TTCTTAATAGAACTG TERM 2720 2592294 - 2592333 + T 100 -12.4 -3.72324 | gap 1, opp_overlap 2592294 TTCAAAATCAAAAAA GCGGGCAGATG-AAAAG TAAAAAT CTTTTCCATCTGTCCGC TTCTTAATAGAACTG SA2306 2592942 - 2592349 - | hypothetical protein SA2307 2593932 - 2592973 - | hypothetical protein TERM 2721 2593965 - 2593982 + r 85 -8.5 -4.37534 | TATTTTTAGTGTATT TATCTCG AAAT CGAGATA TTTTAATGTAAATTT SA2308 2594444 - 2594010 - | hypothetical protein SA2309 2594670 - 2594954 + | hypothetical protein TERM 2722 2594964 - 2594987 + F 100 -13.2 -5.46657 | opp_overlap 2594962 GGTTAAATAAATTTT GCGATGGTGC AACT GTACCATCGC TTTTTTGTTCGCATC SA2310 2595125 - 2595931 + | hypothetical protein TERM 2723 2595970 - 2595998 + T 95 -6.8 -5.84381 | gap 1, opp_overlap 2595971, overlap 2595963 2595971 TTTTTTCACGCAAAA ACCTGCGATT-CA TTTA TGTAATCGCAGGC TTTTTTTATTGCTAA TERM 2724 2595997 - 2595971 - T 100 -10.3 -4.65895 | gap 1, opp_overlap 2595963 2595970 2595971 TTTTTCACGCAAAAA CCTGCGATT-CA TTTA TGTAATCGCAGG CTTTTTTTATTGCTA TERM 2725 2595971 - 2595997 + T 95 -10.3 -4.09002 | gap 1, opp_overlap 2595971, overlap 2595963 2595970 TTTTTCACGCAAAAA CCTGCGATT-CA TTTA TGTAATCGCAGG CTTTTTTTATTGCTA SA2311 2596723 - 2596052 - | hypothetical protein TERM 2726 2597274 - 2597263 - g 76 -4.4 -5.09895 | GATTTAGCTAAAAAA CACA ACAT TGTG ATATCTAACGTTCCT ddh 2596930 - 2597985 + | D-lactate dehydrogenase TERM 2727 2597993 - 2598029 + T 100 -16.1 -5.07523 | opp_overlap 2597999, overlap 2597999 TAAATTAATATATAT TTAAAAGCAAAGGCGCA CCA TGTGCCTTTGCTTTTTA TTTTGTTTATCTGTA TERM 2728 2597999 - 2598023 + T 100 -15.1 -5.67711 | opp_overlap 2597999, overlap 2597993 AATATATATTTAAAA GCAAAGGCGCA CCA TGTGCCTTTGC TTTTTATTTTGTTTA TERM 2729 2598023 - 2597999 - T 100 -12.9 -4.27861 | opp_overlap 2597999 2597993 AATATATATTTAAAA GCAAAGGCGCA CCA TGTGCCTTTGC TTTTTATTTTGTTTA SA2313 2599032 - 2598232 - | hypothetical protein SA2314 2599352 - 2599987 + | hypothetical protein TERM 2730 2600161 - 2600175 + G 76 -2.8 -5.4593 | AGTTCTTATACAGTT GCCA CTGAATT TGGC TTTTTATTATTTTCA SA2315 2600002 - 2600724 + | hypothetical protein TERM 2731 2600735 - 2600757 + T 81 -5.5 -5.28561 | opp_overlap 2600736, overlap 2600736 TGTAGTACATAAAAA AGAGCGGCA TCCAT TGTCGCTCC TTTTTATTATGTATT TERM 2732 2600756 - 2600736 - T 89 -6.8 -5.39721 | opp_overlap 2600736 2600735 GTAGTACATAAAAAA GAGCGGCA TCCAT TGTCGCTC CTTTTTATTATGTAT TERM 2733 2600736 - 2600756 + T 80 -9 -3.74697 | opp_overlap 2600736, overlap 2600735 GTAGTACATAAAAAA GAGCGGCA TCCAT TGTCGCTC CTTTTTATTATGTAT TERM 2734 2600848 - 2600829 - T 100 -8.6 -5.99154 | opp_overlap 2600829 CACCAAACAAAAAAA CAGTCTCG CAAT CAAGACTG TTTTCCACTCAATAT TERM 2735 2600829 - 2600848 + T 70 -6.4 -4.15006 | opp_overlap 2600829 CACCAAACAAAAAAA CAGTCTCG CAAT CAAGACTG TTTTCCACTCAATAT TERM 2736 2600869 - 2600885 + T 81 -8.1 -4.03769 | opp_overlap 2600865 CACTCAATATATTCA TCCATTA GCG TAATGGA TTATTTGACTTCTGT srtA 2601506 - 2600886 - | sortase TERM 2737 2601744 - 2601732 - g 73 -7.7 -3.83768 | AAAAGAAGATTTAAA CGCTA TAT TAGCG ATATACAACGATGCC SA2317 2601700 - 2602191 + | hypothetical protein TERM 2738 2602279 - 2602298 + T 86 -6.4 -5.37593 | ACTATAAACCTCTTA GGGACAAT TTAC ATCGTCCC TTTTTTCATTTCAAA TERM 2739 2602663 - 2602606 - T 100 -15.1 -3.76492 | opp_overlap 2602615, overlap 2602618 TTCAACTTTATGAAA GATAATTAAGAAGCATCTATCTGGTAC TAAT GATCCAGACAGATGCTTCTTTTTTATC AATATCTTATTGTTA TERM 2740 2602615 - 2602654 + T 100 -12.2 -5.29782 | opp_overlap 2602606 2602618 ATGAAAGATAATTAA GAAGCATCTATCTGGTAC TAAT GATCCAGACAGATGCTTC TTTTTTATCAATATC TERM 2741 2602651 - 2602618 - T 93 -10.3 -3.90608 | opp_overlap 2602615, overlap 2602606 AAAGATAATTAAGAA GCATCTATCTGGTAC TAAT GATCCAGACAGATGC TTCTTTTTTATCAAT SA2318 2603583 - 2602684 - | hypothetical protein SA2319 2604277 - 2603597 - | hypothetical protein SA2320 2605323 - 2604280 - | hypothetical protein SA2321 2605873 - 2606076 + | hypothetical protein TERM 2742 2606402 - 2606427 + G 77 -5.5 -4.84262 | gap 1, overlap 2606388 TGTCGATTGGTACGT CACTGCTCGACT TGT AGTC-AGTGGTG TTTTCTTACTTATTA SA2322 2606268 - 2607194 + | hypothetical protein SA2323 2608243 - 2607275 - | hypothetical protein SA2324 2608720 - 2608364 - | hypothetical protein SA2325 2609172 - 2608762 - | hypothetical protein TERM 2743 2609456 - 2609429 - R 100 -14.3 -4.7254 | opp_overlap 2609429 ATTGCGCACTAAAAA GGCAGTAGCTT CATTTT AAGCTACTGCC TTTTGTAACGTATTC TERM 2744 2609429 - 2609456 + r 100 -14.3 -4.42619 | opp_overlap 2609429 ATTGCGCACTAAAAA GGCAGTAGCTT CATTTT AAGCTACTGCC TTTTGTAACGTATTC ptsG 2611618 - 2609552 - | PTS system, glucose-specific IIABC component TERM 2745 2611448 - 2611469 + g 83 -5.9 -5.03715 | opp_overlap 2611453 TGCTTCCATGACCGA CGAAATCAT TACA ATGATATCG TTTTTTAACCATGGT TERM 2746 2611551 - 2611537 - G 93 -8.6 -4.6971 | overlap 2611527 CAAACGCTAATAAAA TACCAG CTG CTGGTA AAATCGCAACAGGTA TERM 2747 2611717 - 2611663 - R 100 -13.4 -5.64274 | gap 3, opp_overlap 2611666 CCATGTACAAAAAAA GCAGGCATGAACAAACAA--G-ACTAT TCTC ATAGTACGGTTGTTTGCTCATGCCTGC ATTACCAGTAACACG TERM 2748 2611883 - 2611839 - R 100 -9.6 -4.55295 | opp_overlap 2611844, overlap 2611844 TTTGTGATAAATAAA CAAAACGGCAATTCCCATTT TGTTG AAATAGAAATTACCGTTTTT ATAGTTCAATTCAAT TERM 2749 2611878 - 2611844 - R 100 -9.5 -5.22481 | opp_overlap 2611844, overlap 2611839 GATAAATAAACAAAA CGGCAATTCCCATTT TGTTG AAATAGAAATTACCG TTTTTATAGTTCAAT SA2327 2613658 - 2611919 - | pyruvate oxidase SA2328 2614398 - 2613709 - | hypothetical protein SA2329 2614786 - 2614391 - | hypothetical protein SA2330 2615886 - 2614999 - | hypothetical protein TERM 2750 2615314 - 2615304 - G 70 -4 -4.93877 | CTTTATTAAATAAAA TGAA GTC TTCA CCTGCTAAATCTTCG TERM 2751 2615812 - 2615832 + g 89 -11.2 -3.3482 | AATATATAATGATTT GGAGGCAT TAGTC ATGCCTCC TTGCTTAACGACTTC SA2331 2616044 - 2616262 + | hypothetical protein TERM 2752 2616296 - 2616319 + F 100 -13.2 -4.90906 | CACATCATCTCATGT TAGCGCTCTG ATTG CAGGGCGCTA TTTTTAATGTTATCG SA2332 2616652 - 2617083 + | hypothetical protein TERM 2753 2617086 - 2617142 + T 74 -2 -5.54885 | gap 3 CTATATTTACTAATC AAAAAACTTCTATCACGAACGC-TTCA ATTTCC TGTATGCG-T-GTGATAGAAGTTTTTA TTTTTTGTTCATATT mvaA 2618499 - 2617222 - | hydroxymethylglutaryl-CoA reductase mvaS 2618754 - 2619920 + | 3-hydroxy-3-methylglutaryl CoA synthase TERM 2754 2619953 - 2620006 + T 71 -7 -3.89881 | gap 1, opp_overlap 2619959, overlap 2619959 CATTTAAATATAACC TA-AAAACAGCAGTAAGACAGCTTC TCATT GAAATCGTCTTACTGCTGTTCTCTA TTTATAACACTTCGT TERM 2755 2619999 - 2619959 - T 100 -14.2 -4.8066 | opp_overlap 2619953 2619959 AATATAACCTAAAAA CAGCAGTAAGACAGCTTC TCATT GAAATCGTCTTACTGCTG TTCTCTATTTATAAC TERM 2756 2619959 - 2619999 + T 95 -12 -3.80279 | opp_overlap 2619959, overlap 2619953 AATATAACCTAAAAA CAGCAGTAAGACAGCTTC TCATT GAAATCGTCTTACTGCTG TTCTCTATTTATAAC adaB 2620606 - 2620085 - | methylated DNA-protein cysteine methyltransferase TERM 2757 2622818 - 2622835 + G 79 -8.5 -3.78234 | GAATTCCTTAACCGC TTCAACG GCAT CGTTGAA TTCTTACATTTAGAT clpL 2621015 - 2623120 + | ATP-dependent Clp proteinase chain clpL TERM 2758 2623150 - 2623179 + T 91 -5.1 -5.73672 | gap 1, opp_overlap 2623150 ATCGCGCATCAAAAA TGAGCATCAGGT CGCCCTT GCCTG-TGCTCA TTTTTTTAATTATTT SAS088 2623359 - 2623189 - | hypothetical protein TERM 2759 2623364 - 2623335 - G 74 -2.3 -5.4477 | AAATTGCTAAAAAAA TTAAAATGTTAAT AATG ACTGACACTTTAA CCACTCCTTAAACAA feoB 2625366 - 2623372 - | hypothetical protein SA2338 2625605 - 2625378 - | hypothetical protein TERM 2760 2625805 - 2625765 - R 100 -19.3 -5.08824 | opp_overlap 2625756 CTTCCATGCAAAAAA CCTCCGCTTCAAATGTC ATTGATA GACATTTAAAGCGGAGG CATGTACATGTTATT SA2339 2628310 - 2625821 - | hypothetical protein TERM 2761 2627926 - 2627937 + g 74 -5.8 -4.49132 | CGTCATATGTGATAT CTGC AAAT GCAG TTGTTTTATCTTTAC SA2340 2628455 - 2629003 + | hypothetical protein TERM 2762 2629085 - 2629047 - T 93 -8.4 -5.20333 | gap 1, opp_overlap 2629047 CATTCATAATAAAAA CGATAGT-GTACACG TTAATGAATT CGTGTACTACTATCG TTTTTTATTTTTATC TERM 2763 2629047 - 2629085 + T 100 -8.4 -5.98675 | gap 1, opp_overlap 2629047 CATTCATAATAAAAA CGATAGT-GTACACG TTAATGAATT CGTGTACTACTATCG TTTTTTATTTTTATC TERM 2764 2629341 - 2629319 - T 89 -6.9 -5.38958 | opp_overlap 2629319 AGTTATAAATAAAAA GAGCCAACC GCAAT GGATGGCCC TTGTTCATTATGAAG rocA 2630903 - 2629359 - | 1-pyrroline-5-carboxylate dehydrogenase SA2342 2631692 - 2631093 - | hypothetical protein SA2343 2631931 - 2632122 + | hypothetical protein TERM 2765 2632261 - 2632221 - f 100 -12.7 -3.66139 | opp_overlap 2632223, overlap 2632223 TATATAGATGCTAAA TAGAGAGATTGTTGTGCAA TGT TTGCACGGCAATCTCTCTT TTTCTTTTTAAAATT TERM 2766 2632223 - 2632259 + F 100 -19.7 -5.61881 | opp_overlap 2632221 2632223 TATAGATGCTAAATA GAGAGATTGTTGTGCAA TGT TTGCACGGCAATCTCTC TTTTTCTTTTTAAAA TERM 2767 2632259 - 2632223 - f 100 -15.3 -3.40558 | opp_overlap 2632223, overlap 2632221 TATAGATGCTAAATA GAGAGATTGTTGTGCAA TGT TTGCACGGCAATCTCTC TTTTTCTTTTTAAAA TERM 2768 2632663 - 2632651 - g 83 -6.3 -4.88405 | AAGTGTTAAATAAAA TGAAC GGC GTTCA AAATGCAACGGTCAA copA 2632362 - 2634770 + | copper-transporting ATPase copA TERM 2769 2635198 - 2635210 + F 90 -7.7 -5.1925 | opp_overlap 2635197 ACTGAACGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SA2345 2635308 - 2635514 + | hypothetical protein TERM 2770 2635601 - 2635555 - T 85 -3.9 -5.73563 | gap 1 ACCAAATTAAAAAAA TCGAACTGATGAGA-ATCCCAA CAAT CCAAATTATCTCATCAGTTCGA TTTTTAATTTACTCG SA2346 2636603 - 2635605 - | D-lactate dehydrogenase SA2347 2637780 - 2636626 - | hypothetical protein crtN 2639716 - 2638208 - | squalene synthase TERM 2771 2639300 - 2639326 + g 74 -3 -5.252 | overlap 2639303 GCGATACGTTCTTTC TAAGAAATAGCG ACG TGCAATTTCATA TTTTTTATAAACATC crtM 2640591 - 2639728 - | squalene synthase SA2350 2641755 - 2640628 - | hypothetical protein SA2351 2643254 - 2641761 - | hypothetical protein SA2352 2643744 - 2643247 - | hypothetical protein TERM 2772 2643890 - 2643859 - R 100 -10.3 -5.58522 | opp_overlap 2643859 TATATAAAACAAAAA CGCCAATACTCTC ATGTTA GAGAATATTGACG TCATTTGATTTACAT SA2353 2644677 - 2643910 - | hypothetical protein TERM 2773 2644080 - 2644094 + g 75 -8.6 -3.43848 | opp_overlap 2644079 2644082, overlap 2644077 TTGTTTGCATGATAG CACCAA CTT TTGGTG TATTGTTCACTGTAT SA2354 2646849 - 2645038 - | hypothetical protein SA2355 2647850 - 2647362 - | hypothetical protein TERM 2774 2648079 - 2648055 - R 100 -7.9 -5.87996 | opp_overlap 2648055 2648054 TAATTAATAAAAAAA CTCTCCCCA ATTTCTA TGGGAAGAG CTATATATTTAATGT isaA 2648827 - 2648126 - | immunodominant antigen A TERM 2775 2648429 - 2648453 + g 81 -9.3 -3.81428 | overlap 2648430 2648447 2648448 GCTGTAGTTATGGTA AGTTGGAGCTG AAA CAGCTTCAACG TTTGAGTTACTTGAT TERM 2776 2648430 - 2648452 + g 86 -12.8 -2.88134 | overlap 2648429 2648447 2648448 CTGTAGTTATGGTAA GTTGGAGCTG AAA CAGCTTCAAC GTTTGAGTTACTTGA TERM 2777 2649145 - 2649155 + r 72 -4 -5.10461 | CAGCTTTCGTAATAT TACA GAT TGTA TTTTTGTTACATAGC TERM 2778 2649226 - 2649267 + r 72 -6.7 -4.09374 | opp_overlap 2649228, overlap 2649228 TTAAACGCAATTAAA AAGCAATCAACACATATGT TTCT GCACATGTATTGATTGCTA TTATTGTTGTATATT TERM 2779 2649265 - 2649228 - R 100 -13 -4.90917 | opp_overlap 2649228 2649226 AAACGCAATTAAAAA GCAATCAACACATATG TTTCTG CACATGTATTGATTGC TATTATTGTTGTATA TERM 2780 2649228 - 2649265 + r 81 -9.3 -3.61971 | opp_overlap 2649228, overlap 2649226 AAACGCAATTAAAAA GCAATCAACACATATGT TTCT GCACATGTATTGATTGC TATTATTGTTGTATA SA2357 2650490 - 2649435 - | hypothetical protein SA2358 2650900 - 2651469 + | hypothetical protein TERM 2781 2651639 - 2651676 + F 90 -6.5 -5.63236 | opp_overlap 2651637 2651640, overlap 2651640 AACTGAATGAAAATA AGCTTGTCATTAAAA CATATAGA TTTTAGTGACAAGCA TTTTTGTTTTTGCGT TERM 2782 2651675 - 2651640 - f 81 -8.5 -4.33004 | opp_overlap 2651639 2651640, overlap 2651637 ACTGAATGAAAATAA GCTTGTCATTAAAAC ATATAG ATTTTAGTGACAAGC ATTTTTGTTTTTGCG TERM 2783 2651640 - 2651675 + F 90 -10 -3.95502 | opp_overlap 2651640 2651637, overlap 2651639 ACTGAATGAAAATAA GCTTGTCATTAAAA CATATAGA TTTTAGTGACAAGC ATTTTTGTTTTTGCG SA2359 2651847 - 2652167 + | hypothetical protein SA2360 2652387 - 2652617 + | hypothetical protein SAS089 2652848 - 2652690 - | hypothetical protein TERM 2784 2652772 - 2652784 + g 88 -7.7 -5.1925 | opp_overlap 2652771 ACTGAATGAAAATGC GCTTG TAA CAAGC TTTTTTCAATTCTAG SA2361 2653296 - 2652919 - | hypothetical protein SA2362 2654134 - 2653313 - | hypothetical protein TERM 2785 2653732 - 2653748 + g 70 -3.8 -5.00027 | CTGTTGCATTTATAT TAGATT CCATT AATCTA TTTTCTATTTTTGCT SA2363 2654453 - 2654154 - | hypothetical protein TERM 2786 2654547 - 2654534 - H 74 -6.7 -4.30987 | opp_overlap 2654530 2654526 2654534, overlap 2654520 ACGTTTTATAATAAA CGGAT AGTT ATCCG TTTGTCAATTTTAGA TERM 2787 2654534 - 2654547 + H 72 -6.7 -4.06179 | opp_overlap 2654520 2654534, overlap 2654530 2654526 ACGTTTTATAATAAA CGGAT AGTT ATCCG TTTGTCAATTTTAGA SA2364 2654584 - 2655141 + | hypothetical protein SA2365 2655134 - 2655838 + | hypothetical protein TERM 2788 2655902 - 2655884 - f 74 -3.1 -5.38047 | GAGGTATATAAAAAA TGCTTCT GCAAT AGATGCA ATATACATGCAAAAC SA2366 2655936 - 2656946 + | hypothetical protein TERM 2789 2657414 - 2657397 - g 71 -3.5 -5.19879 | gap 1 TTGGAAAGATAAAAA TGATG-AC ATT GTGCATCA AATTTTAACAGAAGG TERM 2790 2657728 - 2657702 - g 95 -8.8 -4.84602 | ATATAAACAAAGAAA CTGGCATACCTA TTG TAGATATTCCAG GCGGTCACTTAGGTT SA2367 2656966 - 2657796 + | hypothetical protein TERM 2791 2657816 - 2657862 + T 89 -6.6 -5.34381 | opp_overlap 2657817 2657819, overlap 2657819 TCGTTCTCTAATAAA ACAGCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGCTTA TTTTTGTTTACGTTT TERM 2792 2657861 - 2657817 - T 73 -5.7 -4.63218 | opp_overlap 2657816 2657819, overlap 2657819 CGTTCTCTAATAAAA CAGCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGCTT ATTTTTGTTTACGTT TERM 2793 2657819 - 2657859 + T 100 -12.7 -4.72696 | opp_overlap 2657817 2657819, overlap 2657816 TTCTCTAATAAAACA GCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGC TTATTTTTGTTTACG TERM 2794 2657859 - 2657819 - T 79 -8.3 -3.93367 | opp_overlap 2657819 2657816, overlap 2657817 TTCTCTAATAAAACA GCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGC TTATTTTTGTTTACG SA2368 2658833 - 2657943 - | hypothetical protein SA2369 2660270 - 2658930 - | hypothetical protein SA2370 2661370 - 2660264 - | hypothetical protein TERM 2795 2661435 - 2661421 - R 74 -7.2 -3.96148 | opp_overlap 2661421 GTTTTTGACTATAAA TCGTAA TAA TTACGA TTTATAAAGTATAGA TERM 2796 2661421 - 2661435 + r 74 -7.2 -3.91144 | opp_overlap 2661421 GTTTTTGACTATAAA TCGTAA TAA TTACGA TTTATAAAGTATAGA TERM 2797 2661523 - 2661486 - R 74 -2.1 -5.52079 | gap 1, opp_overlap 2661496 ATATTAAAAGAAAAA CTTCCGTTATTGTAGA GAATTCA TCTACATTT-CGGAAG TTGGTATGTGTCTTT SA2371 2661999 - 2661703 - | hypothetical protein SA2372 2662355 - 2661987 - | hypothetical protein SA2373 2662645 - 2662370 - | hypothetical protein TERM 2798 2662772 - 2662758 - R 70 -5.8 -4.24948 | opp_overlap 2662757 2662753 TGATTATATTCAAAA TTATTG TAT CAATAA ATATGTATCATTCCT SA2374 2663855 - 2662989 - | hypothetical protein SA2375 2664073 - 2665137 + | dihydroorotate dehydrogenase 2 TERM 2799 2665334 - 2665320 - g 91 -4.2 -5.9218 | CAGATAATAAAAAAA CAGTAG CGA CTTCTG ACAACAAAGACACAC SA2376 2665292 - 2665567 + | hypothetical protein TERM 2800 2665644 - 2665683 + T 100 -11.6 -4.37506 | opp_overlap 2665644 CGATTATATAAATAA CCCGAGATTTTAGTATGA TTCA TTTCACTAAAATCTCGGG TTTCTATTTGATAAT TERM 2801 2665683 - 2665644 - T 100 -11.7 -4.16814 | opp_overlap 2665644 CGATTATATAAATAA CCCGAGATTTTAGTA TGATTCATTT CACTAAAATCTCGGG TTTCTATTTGATAAT SA2377 2666475 - 2665753 - | hypothetical protein TERM 2802 2666752 - 2666774 + H 75 -4.2 -5.21709 | opp_overlap 2666752, overlap 2666754 ATTGACTTCAATTCA TCGTAAAAGT TAT ACTTTTGCCA TTTTTTAATGTAACA SA2378 2666829 - 2667278 + | hypothetical protein TERM 2803 2667322 - 2667356 + T 77 -5.8 -4.91357 | opp_overlap 2667325, overlap 2667325 GCTTATGTTATTTAG CAAGGCAAGCCA CTCTCGATTCA TGGCTTGCCTTA TTTTATTGTATATTT TERM 2804 2667325 - 2667353 + T 79 -7.5 -4.51787 | opp_overlap 2667325, overlap 2667322 TATGTTATTTAGCAA GGCAAGCCA CTCTCGATTCA TGGCTTGCC TTATTTTATTGTATA TERM 2805 2667353 - 2667325 - T 70 -8.2 -3.18582 | opp_overlap 2667325 2667322 TATGTTATTTAGCAA GGCAAGCCAC TCTCGATTC ATGGCTTGCC TTATTTTATTGTATA SA2379 2667946 - 2667359 - | hypothetical protein SA2380 2668089 - 2669771 + | hypothetical protein TERM 2806 2669825 - 2669862 + T 90 -7.8 -5.31855 | gap 1, opp_overlap 2669826, overlap 2669826 TAGTGATAGAAGAGA AGGCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGCCC TTTTTATTATTGATG TERM 2807 2669861 - 2669826 - T 95 -11.3 -3.80276 | gap 1, opp_overlap 2669826 2669825 AGTGATAGAAGAGAA GGCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGCC CTTTTTATTATTGAT TERM 2808 2669826 - 2669861 + T 95 -11.3 -3.77486 | gap 1, opp_overlap 2669826, overlap 2669825 AGTGATAGAAGAGAA GGCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGCC CTTTTTATTATTGAT SA2381 2670504 - 2669869 - | hypothetical protein SA2382 2671086 - 2670520 - | hypothetical protein TERM 2809 2671205 - 2671252 + r 76 -2.8 -5.57396 | opp_overlap 2671209, overlap 2671206 2671208 2671209 TATTTCAAAAATAGT AAAACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGCTGA TTTTTTATTCATTGT TERM 2810 2671208 - 2671249 + r 76 -8.9 -3.51774 | opp_overlap 2671209, overlap 2671206 2671205 2671209 TTCAAAAATAGTAAA ACCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGGC TGATTTTTTATTCAT TERM 2811 2671248 - 2671209 - R 100 -14.6 -4.60746 | opp_overlap 2671208 2671206 2671205 2671209 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA TERM 2812 2671209 - 2671248 + r 100 -12.4 -2.69438 | opp_overlap 2671209, overlap 2671208 2671206 2671205 TCAAAAATAGTAAAA CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG CTGATTTTTTATTCA SA2383 2672001 - 2671339 - | hypothetical protein TERM 2813 2671482 - 2671504 + g 82 -4.2 -5.45652 | ATGATTTAGATGTGT TGTGATTATA AAT TCTAATCGCA TTTTTTATTCCAAAT TERM 2814 2672492 - 2672454 - H 74 -9.2 -2.86315 | overlap 2672426 2672453 2672449 CAAATCAAAATTAAT TGGTTATAATGAAC GCTTAATGTCA GTTCATTATAACCA GTAAGGAGAAGGTTA ermA 2672535 - 2673266 + | rRNA methylase Erm(A) TERM 2815 2673314 - 2673273 - T 75 -7.5 -4.10552 | gap 1, opp_overlap 2673277 2673281, overlap 2673277 2673281 TTTCACTAAATTAAA GTAATAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTATT-C TTCCCAAAAATTGTT TERM 2816 2673277 - 2673311 + T 81 -9.5 -3.61894 | opp_overlap 2673273 2673277 2673281, overlap 2673281 ACTAAATTAAAGTAA TAAAGCGTTCTCT AATTTCACA AGAGGACGCTTTA TTCTTCCCAAAAATT TERM 2817 2673311 - 2673277 - T 81 -9.4 -3.66117 | opp_overlap 2673277 2673281, overlap 2673273 2673281 ACTAAATTAAAGTAA TAAAGCGTTCTCTAAT TTC ACAAGAGGACGCTTTA TTCTTCCCAAAAATT TERM 2818 2673307 - 2673281 - T 71 -5.8 -4.42206 | opp_overlap 2673277 2673281, overlap 2673277 2673273 AATTAAAGTAATAAA GCGTTCTCTAAT TTC ACAAGAGGACGC TTTATTCTTCCCAAA TERM 2819 2673281 - 2673307 + T 71 -5.9 -4.44667 | opp_overlap 2673281 2673277 2673273, overlap 2673277 AATTAAAGTAATAAA GCGTTCTCT AATTTCACA AGAGGACGC TTTATTCTTCCCAAA ant(9) 2674174 - 2673392 - | O-nucleotidylltransferase(9) tnpC 2674702 - 2674325 - | transposition regulatory protein tnpC tnpB 2676601 - 2674709 - | transposition regulatory protein tnpB tnpA 2677683 - 2676598 - | transposition regulatory protein tnpA truncated-SA 2678308 - 2677802 - | hypothetical protein TERM 2820 2678638 - 2678591 - R 100 -10.9 -4.8543 | opp_overlap 2678597, overlap 2678597 CAATTGGCATAAAAA TAAAAACCCCTAATGGATAAC TACATT GTTATCTACTAGAGGTTTCTA ACTTATACTATTTTA TERM 2821 2678632 - 2678597 - R 100 -7.7 -5.69262 | opp_overlap 2678597, overlap 2678591 GCATAAAAATAAAAA CCCCTAATGGATAAC TACATT GTTATCTACTAGAGG TTTCTAACTTATACT panD 2679022 - 2678651 - | aspartate alpha-decarboxylase panC 2679887 - 2679036 - | pantoate--beta-alanine ligase panB 2680698 - 2679880 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase SA2393 2680771 - 2681631 + | 2-dehydropantoate 2-reductase TERM 2822 2681700 - 2681652 - T 77 -4.9 -5.1764 | gap 2 TATATAATATAAAAA GACCTTAACGATGCATTTAGAAC CACCT GTTCCTAAT--ATCGCTAAGGTC TTTTAATTATATTAG SA2394 2682421 - 2681717 - | hypothetical protein TERM 2823 2682658 - 2682615 - R 95 -8.3 -5.40072 | opp_overlap 2682616, overlap 2682616 TGCTTGCTAAAAAAA TGGATCTATCAGTGCCACA TGTTAC TGCAACACTAATAGATCCT CTTACCATTAATATA TERM 2824 2682657 - 2682616 - R 95 -11.8 -3.83561 | opp_overlap 2682616, overlap 2682615 GCTTGCTAAAAAAAT GGATCTATCAGTGCCACA TGTTAC TGCAACACTAATAGATCC TCTTACCATTAATAT SA2395 2683658 - 2682699 - | L-lactate dehydrogenase SA2396 2684344 - 2685792 + | hypothetical protein TERM 2825 2685806 - 2685843 + T 100 -8.8 -5.8901 | gap 2, opp_overlap 2685806 AAAAAATCAAAAAAA TCATTTCC-CATCTG-AT TAAC ATCCAGATGTGGAAATGA TTTTTTATTTTATAT TERM 2826 2685843 - 2685806 - T 100 -10.1 -5.88061 | gap 1, opp_overlap 2685806 AAAAAATCAAAAAAA TCATTTCC-CATCTGATT AAC ATCCAGATGTGGAAATGA TTTTTTATTTTATAT SA2397 2687246 - 2685873 - | 4-aminobutyrate aminotransferase SA2398 2687468 - 2687884 + | hypothetical protein TERM 2827 2687946 - 2687960 + F 85 -7.2 -4.93296 | TCAAGGTTTATGACT TGAGAA ATG TTCTCA TTTTTATCATACTGG SA2399 2688007 - 2688897 + | fructose-1,6-bisphosphate aldolase TERM 2828 2688940 - 2688977 + T 90 -7.9 -5.27477 | gap 1, opp_overlap 2688940 TAAACTACTAAAAAG GACTCATACAT-GTGCTT TAA GGGCATTGTGTATGAGTC TTTTTTGATTAAAGT TERM 2829 2689028 - 2689068 + T 100 -19.3 -4.24204 | opp_overlap 2689028 GATTACGTAAAAAAA TCGGACAGCTGAAAAATCT TTA AGATTTCTCAGTTGTCCGA TTTTAAATATAGCTA TERM 2830 2689068 - 2689028 - T 100 -19.3 -5.48825 | opp_overlap 2689028 GATTACGTAAAAAAA TCGGACAGCTGAAAAATCT TTA AGATTTCTCAGTTGTCCGA TTTTAAATATAGCTA mqo2 2690587 - 2689091 - | malate:quinone oxidoreductase TERM 2831 2689184 - 2689194 + g 70 -4 -4.89562 | opp_overlap 2689172 TAATGATTCACCGTA TGAT GGA ATCA TTTTCTTGATTTTAG TERM 2832 2689366 - 2689399 + g 73 -8.3 -3.54129 | gap 1 GGATGAATCCTTTAC CGTGTTCAGGTGTATC TTT GATA-ACTTGTACACG TTTACCAGCAGTGTA TERM 2833 2689813 - 2689824 + g 84 -5.8 -5.32882 | CCAAATGTTTACTTT CAGG GATA CCTG TTTTTTGTAATAATG SA2401 2690964 - 2691212 + | hypothetical protein TERM 2834 2691264 - 2691218 - T 100 -10.2 -4.61852 | opp_overlap 2691212 2691221, overlap 2691221 AACATCATAAATAAA CAAGCAGTCCAGTGCGTATCAT CAT ACCTTACGCATTGGACTGCTTT GCTATGTTTATTGAT TERM 2835 2691261 - 2691221 - T 100 -11.9 -4.39652 | opp_overlap 2691221 2691212, overlap 2691218 ATCATAAATAAACAA GCAGTCCAGTGCGTATCAT CAT ACCTTACGCATTGGACTGC TTTGCTATGTTTATT TERM 2836 2691221 - 2691261 + T 100 -13.5 -3.99819 | opp_overlap 2691218 2691221, overlap 2691212 ATCATAAATAAACAA GCAGTCCAGTGCGTA TCATCATACCT TACGCATTGGACTGC TTTGCTATGTTTATT SA2402 2692891 - 2691272 - | acetate-CoA ligase SA2403 2693507 - 2693064 - | hypothetical protein TERM 2837 2693756 - 2693727 - R 74 -7.9 -3.745 | overlap 2693725 TTAGTCATGAAAATA GCCGACAACTTCA TCTG TGAAATCACCGGC CTTTTATTTTAGCTA SA2404 2693999 - 2693787 - | hypothetical protein TERM 2838 2694256 - 2694228 - R 100 -12.5 -5.28315 | opp_overlap 2694254 ATAAAACGCAAAAAA GTCTGGCACCAAT ACA ATAGATGCCAGAC TAAGAGTCTACTATA betA 2695986 - 2694277 - | choline dehydrogenase TERM 2839 2695560 - 2695580 + g 79 -3.9 -5.47914 | opp_overlap 2695565 GGCCTCTAAATTTAT CATAAGGCG CTG CACCGTATG TTTTTTCTAATTTTT TERM 2840 2696202 - 2696234 + r 71 -8.6 -2.82138 | gap 1, opp_overlap 2696202, overlap 2696201 CTTATACAAAACAAA GTGAGTGTC-TTGTG TTCT TACAATGGCACTCAC CTTATCTAATTTTTA TERM 2841 2696234 - 2696202 - R 75 -5.7 -4.83243 | gap 1, opp_overlap 2696202 2696201 CTTATACAAAACAAA GTGAGTGTC-TTGT GTTCTT ACAATGGCACTCAC CTTATCTAATTTTTA gbsA 2697737 - 2696247 - | glycine betaine aldehyde dehydrogenase gbsA TERM 2842 2697756 - 2697779 + H 70 -6.2 -4.12198 | ACAACCTCCGTTAAG TTTGTTAAAT TTTT ATTTAACGAA TTTTACAAACTTATG TERM 2843 2698323 - 2698311 - g 77 -4.9 -5.14563 | TTTTTCACTAAAAAA TTTCA GCG TGAAA TTGACATCAATGTCG SA2407 2697987 - 2698553 + | hypothetical protein TERM 2844 2698623 - 2698656 + T 100 -12.7 -5.58522 | opp_overlap 2698623 GGTCCACGAAATAAA CGGTAATTTCTATCT CAAT AAATAGAAATTACCG TTTTTGTTTTATATG TERM 2845 2698656 - 2698623 - T 100 -14.9 -4.49556 | opp_overlap 2698623 GGTCCACGAAATAAA CGGTAATTTCTATCT CAAT AAATAGAAATTACCG TTTTTGTTTTATATG cudT 2700346 - 2698724 - | choline transporter TERM 2846 2698860 - 2698850 - G 70 -4 -4.86773 | TAAAATGATTAAAAA TGAT ATC ATCA TGAAAATAAAAATAA TERM 2847 2700607 - 2700625 + r 71 -4.6 -4.73677 | GCATTTAAGAATATT TATACGTT TTT AACGAATA TTTATTTATTGTAAA TERM 2848 2700854 - 2700823 - R 100 -14.6 -4.75174 | opp_overlap 2700826 TACCTAACCTAAAAA GAAGCCAAGGCAAC GAAT GTTACCTTGACTTC TAATACATATTCAAC SA2409 2701401 - 2700865 - | hypothetical protein nrdD 2703248 - 2701398 - | anaerobic ribonucleoside triphosphate reductase TERM 2849 2702907 - 2702932 + g 81 -9.1 -3.71672 | opp_overlap 2702913, overlap 2702913 ATTGGCTATAATTTG TACAAGCTGCG CTGA TGCAGTTTGTA TTGATTTTGGTGAAG SA2411 2704808 - 2703438 - | hypothetical protein TERM 2850 2704712 - 2704696 - G 79 -9.5 -3.33815 | ATTGCCCCTAAGCAA GGTATGA TTG TCATACC TACAACTGGATTTAT TERM 2851 2705095 - 2705055 - R 86 -7.1 -5.26316 | gap 1 CTATTGCACAAAAAA TCTGGCTAAAGGTCGCTA TGATAG TAACGAC-TTCAACCAGA TTTCAATTTATCCAT SA2412 2705906 - 2705301 - | precorrin-2 dehydrogenase SA2413 2707849 - 2705969 - | sulfite reductase flavoprotein (NADPH) TERM 2852 2708205 - 2708165 - R 100 -13.5 -4.78848 | opp_overlap 2708164 2708166 2708197, overlap 2708166 TTTCTAAATATAAAA TGCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGCT CTTGTGTTATTTGCA TERM 2853 2708166 - 2708204 + r 83 -10.4 -3.53115 | opp_overlap 2708165 2708166, overlap 2708164 2708197 TTCTAAATATAAAAT GCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGC TCTTGTGTTATTTGC TERM 2854 2708204 - 2708166 - R 100 -17 -3.46586 | opp_overlap 2708166 2708164 2708197, overlap 2708165 TTCTAAATATAAAAT GCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGC TCTTGTGTTATTTGC SA2414 2708740 - 2708243 - | hypothetical protein TERM 2855 2710062 - 2710038 - R 100 -10.1 -4.8048 | TTGTTATATTAAAAA CCGACAAGACA TTT TATCTTATCGG TTCAAATTTGGTATT SA2415 2712164 - 2710164 - | hypothetical protein SA2416 2712916 - 2712161 - | hypothetical protein TERM 2856 2713002 - 2712963 - R 88 -3.2 -6.11229 | overlap 2712981 ATTAAAACAAAAAAA TACTAATAACATTT AAATTAGTAAAA AAATGTTACTAGTA TACTTACAATATTGA SA2417 2713911 - 2713024 - | hypothetical protein SA2418 2714587 - 2713922 - | hypothetical protein SA2419 2714813 - 2714613 - | hypothetical protein phoB 2715011 - 2716435 + | alkaline phosphatase III precursor TERM 2857 2716448 - 2716478 + T 100 -11.2 -5.42265 | opp_overlap 2716448 TAAAGCATAAAAAAA TTCCCGAGCACTAT AAC AAGGTGTTCGGGAA TTTTTTATGGTTTAA TERM 2858 2716478 - 2716448 - T 95 -6.9 -5.75599 | opp_overlap 2716448 TAAAGCATAAAAAAA TTCCCGAGCAC TATAACAAG GTGTTCGGGAA TTTTTTATGGTTTAA SA2421 2717191 - 2716718 - | hypothetical protein SA2422 2718179 - 2717418 - | hypothetical protein TERM 2859 2718281 - 2718262 - R 100 -10.8 -5.7946 | TTTTCAACAAAAAAA CCGAATAC AAAT GTATTCGG CCTAAAAAAGTATTT clfB 2720928 - 2718295 - | clumping factor B TERM 2860 2721218 - 2721245 + r 74 -9.2 -2.76313 | opp_overlap 2721218, overlap 2721215 CATGCTAGCAAAAAA GGCCTAACGTAT AAAT GTACGTTAGACC TCATGTTCAACTTAT TERM 2861 2721245 - 2721218 - R 100 -10.7 -5.15634 | opp_overlap 2721218 2721215 CATGCTAGCAAAAAA GGCCTAACGTA TAAATG TACGTTAGACC TCATGTTCAACTTAT SA2424 2721982 - 2721278 - | hypothetical protein arcC 2723022 - 2722081 - | carbamate kinase arcD 2724469 - 2723039 - | arginine/oirnithine antiporter arcB 2725570 - 2724560 - | ornithine carbamoyltransferase arcA 2726838 - 2725603 - | arginine deiminase TERM 2862 2727145 - 2727104 - R 100 -13.3 -5.60993 | CTTTCCATAAAAAAA CGCGTACACAAGTTAAT ATTTGGTA ACTAACTTGTGTACACG TGATACGAAACTAAT SA2429 2727634 - 2727185 - | hypothetical protein TERM 2863 2727929 - 2727890 - R 79 -9.4 -3.38415 | opp_overlap 2727888, overlap 2727888 2727886 CTAATTACAAAGAGA GGGTATACCTACAAAG TCAATTAT CAATGTAGGTATACCC CATATATAAGCTGTA aur 2729530 - 2728001 - | zinc metalloproteinase aureolysin TERM 2864 2729937 - 2729903 - R 72 -2.9 -5.4833 | gap 1 TTATTTAATAAAAAA GACTAGAATGCG-GTA TCTC TCCTCACACTCTAGCC TTAATATGCCATTAT isaB 2730481 - 2729954 - | immunodominant antigen B SA2432 2730739 - 2731197 + | hypothetical protein TERM 2865 2731244 - 2731290 + F 100 -11.2 -4.47786 | opp_overlap 2731247, overlap 2731247 TGCATAAATTCAGAA AAACAGCAGTGAGATATTTT TCTATTT GAAATATCTTACTGCTGTTC TTTATTTGCATAATT TERM 2866 2731287 - 2731247 - f 100 -10 -4.95896 | opp_overlap 2731244 2731247 ATAAATTCAGAAAAA CAGCAGTGAGATATTT TTCTATTTG AAATATCTTACTGCTG TTCTTTATTTGCATA TERM 2867 2731247 - 2731287 + F 100 -12.9 -4.34285 | opp_overlap 2731247, overlap 2731244 ATAAATTCAGAAAAA CAGCAGTGAGATATTTT TCTATTT GAAATATCTTACTGCTG TTCTTTATTTGCATA SA2433 2731437 - 2733311 + | hypothetical protein TERM 2868 2733306 - 2733336 + F 85 -4.9 -5.58454 | opp_overlap 2733306 2733309 TTTGAATACTTACAA GAATAATTGCC ACTAGTAAC GGTAATTATTC TTTTTTTAGTATCGA TERM 2869 2734635 - 2734592 - g 77 -9 -3.59738 | gap 1, opp_overlap 2734594 2734597 2734598, overlap 2734595 CATTATACCTGCAAA CATCATTGG-TGCAATGATTG CAT CAGTCATTGCAGCCATTGGTG GTGTCGGCGATAGAG TERM 2870 2734632 - 2734595 - g 72 -9.3 -2.62171 | gap 1, opp_overlap 2734594 2734597 2734598, overlap 2734592 TATACCTGCAAACAT CATTGG-TGCAATGATTG CAT CAGTCATTGCAGCCATTG GTGGTGTCGGCGATA TERM 2871 2734598 - 2734629 + G 89 -11.8 -3.24747 | gap 1, opp_overlap 2734595 2734592, overlap 2734594 2734597 ACCTGCAAACATCAT TGG-TGCAATGATTG CAT CAGTCATTGCAGCCA TTGGTGGTGTCGGCG SA2434 2733387 - 2735339 + | hypothetical protein TERM 2872 2735571 - 2735544 - g 73 -8.6 -3.21395 | opp_overlap 2735536 2735542 2735539, overlap 2735542 ACTTTGGTCACAACA TCGTGAATTATT CGAT AATGATTCACGA GATAGTTTCCCTCTG pmi 2735353 - 2736291 + | mannose-6-phosphate isomerase TERM 2873 2736354 - 2736399 + T 82 -6.3 -5.24796 | opp_overlap 2736359, overlap 2736359 TCTGTCTAAAAACAT AAAAATCCACACATTAAGG AGCTATAA CCCTAATGTGTGGATTTAA TTTTTATTCTGTAAC TERM 2874 2736359 - 2736394 + T 100 -10.6 -4.44392 | opp_overlap 2736359, overlap 2736354 CTAAAAACATAAAAA TCCACACATTAAGG AGCTATAA CCCTAATGTGTGGA TTTAATTTTTATTCT TERM 2875 2736394 - 2736359 - T 100 -12.8 -5.36364 | opp_overlap 2736359 2736354 CTAAAAACATAAAAA TCCACACATTAAGG AGCTATAA CCCTAATGTGTGGA TTTAATTTTTATTCT SA2436 2739384 - 2736403 - | hypothetical protein SA2437 2739595 - 2741454 + | N-acetylmuramoyl-L-alanine amidase TERM 2876 2741546 - 2741578 + T 72 -8.4 -3.33092 | opp_overlap 2741548, overlap 2741545 2741548 TTTCTTATTCAATTA AACCCGAGGTATTC AGTTC GAACGCCTCGGGTC ATTTTATATAAATAT TERM 2877 2741548 - 2741576 + T 87 -11 -3.22496 | opp_overlap 2741548, overlap 2741546 2741545 TCTTATTCAATTAAA CCCGAGGTATTC AGTTC GAACGCCTCGGG TCATTTTATATAAAT TERM 2878 2741576 - 2741548 - T 100 -11.7 -3.93288 | opp_overlap 2741548 2741546 2741545 TCTTATTCAATTAAA CCCGAGGTATTCA GTT CGAACGCCTCGGG TCATTTTATATAAAT SA2438 2742279 - 2741719 - | hypothetical protein SA2439 2744355 - 2742448 - | hypothetical protein SA2440 2745954 - 2744596 - | hypothetical protein SA2441 2747455 - 2745947 - | hypothetical protein SA2442 2749863 - 2747473 - | preprotein translocase subunit SecA TERM 2879 2747738 - 2747752 + g 72 -5 -4.66833 | opp_overlap 2747727 2747738 2747740, overlap 2747740 AAAATATTATAATAA TATGCA CTT TGCATG TTTTTACGATTCAAA TERM 2880 2749540 - 2749529 - G 72 -5.8 -4.35044 | opp_overlap 2749528 2749525 2749529, overlap 2749514 GCATTTAAATATAAA GGCA TCGT TGCC GTTAATGTTTTACCT SA2443 2750893 - 2749853 - | hypothetical protein SA2444 2752358 - 2750790 - | hypothetical protein SA2445 2753901 - 2752348 - | hypothetical protein secY 2755123 - 2753912 - | preprotein translocase subunit SecY TERM 2881 2754310 - 2754327 + g 76 -6.3 -4.64676 | overlap 2754299 2754292 CAAATGTCAGCATTG GCATGTC ATCT GATATGC TTTTATTAAACATAG TERM 2882 2754539 - 2754527 - G 74 -6.3 -4.27463 | overlap 2754518 TAATAAGATAAACAA TGTGA TTA TCACA AGGATGATTAACAAC SA2447 2762068 - 2755253 - | hypothetical protein TERM 2883 2755509 - 2755527 + g 80 -10.4 -3.1247 | overlap 2755524 GATGTGCTCGTGCTG TGAGTATG ATG CATACTCA TTGAGTCTGACGGAT TERM 2884 2761154 - 2761143 - G 70 -4.4 -4.82678 | CCAGAAAAATGAAAA CTCT TATT AGAG TCAATACGTGTTCCT TERM 2885 2762584 - 2762548 - R 93 -8.2 -5.24449 | opp_overlap 2762548 TATAAAGCGAAAAAA TGCATCGCTACTAAGT TGAAT ATTTAGTAACAATGCA TTGAATTCACTAAAA SA2448 2763304 - 2762612 - | hypothetical protein SA2449 2763624 - 2763998 + | hypothetical protein SA2450 2763982 - 2764287 + | hypothetical protein SA2451 2764441 - 2764800 + | hypothetical protein SA2452 2765496 - 2764885 - | hypothetical protein SA2453 2766051 - 2765575 - | methionine sulfoxide reductase A SA2454 2766554 - 2766054 - | hypothetical protein TERM 2886 2766766 - 2766745 - R 100 -9.5 -4.72333 | opp_overlap 2766745 2766747, overlap 2766723 AAGCATACTCAAAAA GACTGGTAC ATGT ATACCAGTC TAATTCGAAAAAATA TERM 2887 2766745 - 2766766 + r 70 -8.8 -2.71144 | opp_overlap 2766723 2766745, overlap 2766747 AAGCATACTCAAAAA GACTGGTA CATGTA TACCAGTC TAATTCGAAAAAATA SA2455 2767556 - 2766789 - | capsular polysaccharide biosynthesis, capC SA2456 2768245 - 2767553 - | capsular polysaccharide biosynthesis, capB SA2457 2768924 - 2768262 - | capsular polysaccharide biosynthesis, capA TERM 2888 2769345 - 2769319 - R 100 -10.2 -4.3953 | opp_overlap 2769318 2769317 2769320, overlap 2769320 GTTAATGATAATAAA GCCCACACCTTT TAA AAAGATGTGGGT AATTTATATAATTTT TERM 2889 2769344 - 2769320 - R 100 -13.7 -3.22995 | opp_overlap 2769320 2769318 2769317, overlap 2769319 TTAATGATAATAAAG CCCACACCTTT TAA AAAGATGTGGG TAATTTATATAATTT TERM 2890 2769320 - 2769344 + r 91 -11.5 -3.0955 | opp_overlap 2769319 2769320, overlap 2769318 2769317 TTAATGATAATAAAG CCCACACCTTT TAA AAAGATGTGGG TAATTTATATAATTT TERM 2891 2769389 - 2769422 + r 100 -14 -3.38118 | opp_overlap 2769389 AACTTATAAAAAAAA GCGCCTATGTCATG ATTTAC CATCACATAGGCGC TTATCAATAAATTAT TERM 2892 2769422 - 2769389 - R 100 -14.7 -5.97575 | opp_overlap 2769389 AACTTATAAAAAAAA GCGCCTATGTCATGA TTTA CCATCACATAGGCGC TTATCAATAAATTAT icaR 2770333 - 2769773 - | ica operon transcriptional regulator IcaR TERM 2893 2770811 - 2770791 - gH 70 -5.6 -4.27483 | opp_overlap 2770786, overlap 2770786 ATCTATAAAATCAAA GAAAATAA TGACT TTATTTTC GTCGATTTACAAGAA TERM 2894 2771180 - 2771200 + GH 81 -9.1 -3.67792 | opp_overlap 2771179 GATTACCGAAGATAT TGCAGTTTC TTG GAAATTGCA TTTACGTGGATATCG icaA 2770497 - 2771735 + | N-glycosyltransferase PgaC icaD 2771699 - 2772004 + | intercellular adhesion protein D icaB 2772001 - 2772873 + | intercellular adhesion protein B TERM 2895 2772983 - 2773010 + G 72 -5 -4.73388 | GGAGGATCCTTAGTA TTACAATTTTAC ATTC GTAATATTGTGA TTTTTGGTACACCTT icaC 2772860 - 2773912 + | intercellular adhesion protein C TERM 2896 2773983 - 2773933 - f 73 -5.5 -4.63184 | gap 1, opp_overlap 2773933 2773944, overlap 2773924 AAGCTATGTTAAAAA CACGCGGT-GGGCGAAATCAGT TTGAATTG ACTGACTTCGTTTTACCGCGTG TTTAATAATGTTATA TERM 2897 2773933 - 2773983 + F 89 -10.6 -3.8572 | gap 1, opp_overlap 2773924 2773933, overlap 2773944 AAGCTATGTTAAAAA CACGCGGT-GGGCGAAATCAGTT TGAATT GACTGACTTCGTTTTACCGCGTG TTTAATAATGTTATA TERM 2898 2774110 - 2774128 + G 83 -6.1 -5.06414 | CTTGCATTGTTTGTA GAATTTC TTTTC GAAATTC TTTTTGTTGGGGCCC SAS090 2774055 - 2774165 + | hypothetical protein lip 2776292 - 2774247 - | triacylglycerol lipase precursor TERM 2899 2774372 - 2774387 + g 72 -6.2 -4.38712 | opp_overlap 2774372 GTCCTACAAAGTCAA CATGAT CCCA ATCATG TTTTGTAGGCGTCAC TERM 2900 2776465 - 2776444 - R 75 -4.5 -5.08824 | opp_overlap 2776433 2776431 2776448, overlap 2776448 TTTGTATTTAAAAAA TATATTCTC CAAA GAGAATTTA AAGTGTATACGCTAA TERM 2901 2776936 - 2776893 - R 70 -4.1 -4.93296 | gap 1, opp_overlap 2776906, overlap 2776895 TGATTAGCATAAAAA TACACCCCATAAAGTTAG TTTTTTAGT CTAACTTT-CGGGATGCA CATCTTAGTTCTAAT TERM 2902 2777027 - 2777003 - R 79 -10.3 -3.00022 | overlap 2777022 TTCAGGCTAGATATA TTTGTATTTAT AGT ATAAATACAAA GAATGTAAAGACAAC hisI 2778014 - 2777382 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein hisF 2778769 - 2778011 - | cyclase-like protein hisF SA2466 2779470 - 2778766 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisH 2780041 - 2779463 - | imidazole glycerol phosphate synthase subunit HisH hisB 2780616 - 2780038 - | imidazoleglycerol-phosphate dehydratase SA2469 2781598 - 2780585 - | hypothetical protein SA2470 2782864 - 2781614 - | histidinol dehydrogenase hisG 2783471 - 2782857 - | ATP phosphoribosyltransferase catalytic subunit hisZ 2784307 - 2783489 - | ATP phosphoribosyltransferase regulatory subunit SA2473 2785735 - 2784611 - | hypothetical protein SA2474 2786350 - 2785853 - | hypothetical protein SA2475 2787230 - 2786397 - | hypothetical protein SA2476 2788834 - 2787227 - | hypothetical protein SA2477 2789546 - 2788992 - | hypothetical protein SA2478 2790423 - 2789575 - | hypothetical protein TERM 2903 2790247 - 2790231 - G 73 -4.4 -4.99035 | gap 1, opp_overlap 2790231 CCACTGATACAAAAA CTGTGCC TTTA GGC-CAG TATTTTACAGTTTGA TERM 2904 2790782 - 2790766 - H 71 -2.3 -5.38249 | overlap 2790768 ATCAAGTATAAAAAA TATATCT AAG AGATAAA AATATGGAGGTTTTA TERM 2905 2791073 - 2791063 - g 77 -5.4 -4.87133 | ACGTTTGAAACAAAA TCAG TTA CTGA AAACAAAGTTGTTGG SA2479 2790802 - 2791317 + | hypothetical protein TERM 2906 2791393 - 2791361 - T 86 -9.3 -3.92267 | opp_overlap 2791361 TATATATATACGAAA TGCCAACTATATC ATCCCTA GGTATAGTTGGCA TTTTTCGTTTAACTC TERM 2907 2791361 - 2791393 + T 100 -11.5 -5.00138 | opp_overlap 2791361 TATATATATACGAAA TGCCAACTATATC ATCCCTA GGTATAGTTGGCA TTTTTCGTTTAACTC drp35 2792442 - 2791468 - | Drp35 TERM 2908 2792618 - 2792629 + H 73 -5.8 -4.66535 | opp_overlap 2792618 2792617 GACGTAGATAAATAT GCGT ATTG ACGC TTTATTTTAAAAATT TERM 2909 2792685 - 2792698 + G 74 -5.3 -4.74285 | AGGAGATTAACCTAT GAACT ATCA AGTTC TTTTATATTATAAAT SA2481 2792683 - 2793639 + | hypothetical protein pcp 2793791 - 2794429 + | pyrrolidone-carboxylate peptidase TERM 2910 2794493 - 2794445 - T 77 -7.8 -4.04319 | gap 2, opp_overlap 2794441 2794455 2794462 TTATAAATGCACAAA CAAAAGCACCCTAATTTGTTAG TTTAAGT CTAACT--TTAGGGTGCTTTTG GATGATTGGTATACA SA2483 2795315 - 2794548 - | hypothetical protein TERM 2911 2794898 - 2794909 + g 71 -3 -5.14563 | CATAAGTCACATTTA TAAC ATAC GTTA TTTTTTGGTCACCAA SA2484 2795643 - 2795305 - | hypothetical protein TERM 2912 2796174 - 2796158 - g 81 -9.5 -3.78409 | opp_overlap 2796158 2796161, overlap 2796161 GCAATTGAATTGAAA CAACCAA TTG TTGGTTG TAATAACTTAGAAGA SA2485 2795810 - 2796274 + | hypothetical protein TERM 2913 2796289 - 2796311 + F 95 -6.3 -5.85425 | opp_overlap 2796279 2796290, overlap 2796290 2796310 AATATGTGCTTATTA ACCGTTAAC AACAC GTTAACGGG TTTTTTATTTGTTTA TERM 2914 2796290 - 2796310 + F 91 -9.8 -4.07595 | opp_overlap 2796279 2796290, overlap 2796289 ATATGTGCTTATTAA CCGTTAAC AACAC GTTAACGG GTTTTTTATTTGTTT TERM 2915 2796310 - 2796290 - f 81 -10.5 -3.14683 | opp_overlap 2796290 2796289, overlap 2796279 ATATGTGCTTATTAA CCGTTAACA ACA CGTTAACGG GTTTTTTATTTGTTT SA2486 2796512 - 2797930 + | hypothetical protein TERM 2916 2797944 - 2797970 + T 86 -7.3 -5.08367 | AAAATATTTAAATTA GTGCTCGAATC TCATT GATTTGGGCGC TTTTTAATTTGTATT TERM 2917 2798219 - 2798176 - T 85 -2.7 -5.99154 | gap 1 CATGAAATAAAAAAA CACCTTCGTTTAAATTCA TTTTAAGTG CGAATTCA-ACGAAAGTG ATTTATTTCATATTC SA2487 2799252 - 2798344 - | hypothetical protein SA2488 2799474 - 2800049 + | hypothetical protein SA2489 2800211 - 2801227 + | hypothetical protein TERM 2918 2801729 - 2801719 - g 79 -5.4 -5.20333 | opp_overlap 2801719, overlap 2801723 TATTTACAACAAAAA GGAT TTA ATCC TGAATTAATGTCAGC SA2490 2801464 - 2802264 + | hypothetical protein TERM 2919 2802381 - 2802336 - T 71 -7.9 -3.5241 | gap 1, opp_overlap 2802380, overlap 2802345 TATGCTTCATAAACA CAACAAAAAGGATATGACACAA ACT TCATGTCACACCCTTCTT-TTG AACCGCTTCATTTTA TERM 2920 2802373 - 2802345 - T 86 -7.5 -5.33331 | overlap 2802336 TAAACACAACAAAAA GGATATGACACAA ACT TCATGTCACACCC TTCTTTTGAACCGCT SA2491 2802910 - 2802398 - | hypothetical protein vraD 2803193 - 2803951 + | hypothetical protein vraE 2803941 - 2805821 + | hypothetical protein SAS091 2805913 - 2806104 + | hypothetical protein TERM 2921 2806163 - 2806185 + F 81 -5.6 -5.31456 | opp_overlap 2806163 AGATTTTAATATCAA CAAGTAGC ATTTATC GCTGCTTG TTTTTTATGAATTGC cspB 2806496 - 2806696 + | cold shock protein cspB TERM 2922 2806732 - 2806712 - T 100 -9.1 -5.18371 | opp_overlap 2806712 2806711 TCTTACAAAATAAAA CGACTCATT ATA AATGAATCG CTTTGATTACCAACA TERM 2923 2806740 - 2806768 + T 100 -14.1 -5.70829 | opp_overlap 2806746 ATGAATCGCTTTGAT TACCAACAAGGTT CTA AATCTTGTTGGTA TTTTTTTATGCTATT SA2495 2807383 - 2806814 - | hypothetical protein TERM 2924 2806979 - 2806993 + g 76 -2.8 -5.52909 | AATTCGATCGTAGTT GTCCAT TTT ATGCAC TTTTTTTAAATCTTC SA2496 2808038 - 2807643 - | hypothetical protein SA2497 2808459 - 2808106 - | hypothetical protein TERM 2925 2808723 - 2808711 - g 88 -7.7 -5.1925 | opp_overlap 2808710 CTAGAATTGAAAAAA GCTTG TTA CAAGC GCATTTTCGTTCAGT SAS092 2808647 - 2808796 + | hypothetical protein TERM 2926 2808843 - 2808871 + T 72 -5.4 -4.6955 | opp_overlap 2808843, overlap 2808838 CGTAAAACAAAAAAA GACAAAGCTG TTATGATCT TAGCTTTGTC TTTTATGTGTTAGTC TERM 2927 2808871 - 2808843 - T 93 -4.7 -6.09196 | opp_overlap 2808843 2808838 CGTAAAACAAAAAAA GACAAAGCT GTTATGATCTT AGCTTTGTC TTTTATGTGTTAGTC SA2498 2809749 - 2808910 - | hypothetical protein gidB 2810511 - 2809792 - | glucose-inhibited division protein B gidA 2812388 - 2810511 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 2813834 - 2812455 - | tRNA modification GTPase TrmE rnpA 2814338 - 2813991 - | ribonuclease P TERM 2928 2814464 - 2814443 - R 100 -11.7 -6.02546 | opp_overlap 2814443 TTAAACGAAAAAAAA GATCACTGA TGAG TCAGTGATC TTATGCAGATAAAAC TERM 2929 2814443 - 2814464 + r 95 -11.7 -3.31144 | opp_overlap 2814443 TTAAACGAAAAAAAA GATCACTGA TGAG TCAGTGATC TTATGCAGATAAAAC rpmH 2814602 - 2814465 - | 50S ribosomal protein L34 SEQUENCE gi|16119200|ref|NC_003140.1| Staphylococcus aureus subsp. aureus N315 plasmid pN315, complete sequence (length 24653) TERM 1 684 - 639 - g 100 -25.1 -3.31263 | overlap 666 675 ACCTTACGGCGAGAA GGACGTTCGATTTTCGAACGT CCAG AAGTTCGAAAATCGAACGTCC AGAAGTTCGAAAATC TERM 2 680 - 666 - g 73 -8.6 -3.33261 | overlap 639 675 TTCGAACGTCCAGAA GTTCGA AAA TCGAAC GTCCAGAAGTTCGAA TERM 3 717 - 675 - g 100 -15 -4.1585 | overlap 666 639 712 CCAGAAGTTCGAAAA TCGAACGTCCAGAAGTTCGA AAA TCGAACGTCCAGAAGTTCGA AAATCGAACACTAAT TERM 4 726 - 712 - g 73 -8.6 -3.3344 | overlap 675 ATCGAACGTCCAGAA GTTCGA AAA TCGAAC ACTAATGATACTGAC rep 232 - 1215 + | hypothetical protein SAP002 1196 - 1516 + | hypothetical protein TERM 5 1517 - 1538 + T 100 -8.1 -6.04419 | opp_overlap 1517 AAAATTATTATTTAA GACATTAGT GATA ACTGATGTC TTTTTTTATTGTTTT TERM 6 1593 - 1625 + T 100 -10.8 -4.11404 | gap 1, overlap 1595 1620 TTTGTGACAAATGCT GTATGTAGTGTCACA CTTT TGTGACACTACA-GC TTTGTATGATATCAC TERM 7 1595 - 1624 + T 100 -12.3 -3.0636 | overlap 1593 1620 TGTGACAAATGCTGT ATGTAGTGTCACA CTTT TGTGACACTACAG CTTTGTATGATATCA TERM 8 1669 - 1683 + T 78 -10 -3.1458 | overlap 1668 1662 AAAACCCTTGGAATG TCTGGC CTT GCCAGA TCTATCATTTTTGAA SAP003 3080 - 2388 - | hypothetical protein SAP004 3190 - 3384 + | hypothetical protein TERM 9 3805 - 3771 - f 90 -8 -5.27923 | opp_overlap 3776, overlap 3776 TAAGGGCATAAAAAA TAAAAGCTACCCCA GATAAAG TGAGGTAGCTTTTT CTTTCATACGGTCTA TERM 10 3776 - 3800 + F 81 -5.7 -5.33405 | opp_overlap 3771 3776 GCATAAAAAATAAAA GCTACCCCA GATAAAG TGAGGTAGC TTTTTCTTTCATACG TERM 11 3800 - 3776 - f 95 -7.9 -5.49579 | opp_overlap 3776, overlap 3771 GCATAAAAAATAAAA GCTACCCCA GATAAAG TGAGGTAGC TTTTTCTTTCATACG TERM 12 3998 - 3985 - f 95 -6.7 -5.95539 | opp_overlap 3985 TTTGAAATAAAAAAA TCGAC GAAG GTCGA TTACGTTTTTGCACA TERM 13 4491 - 4470 - f 74 -8.9 -3.29959 | opp_overlap 4468 4463, overlap 4468 ATATAAGTTATAATA CATTCAAAA ATAT TTTTGAATG AGGTGTATTATGATT TERM 14 4556 - 4575 + G 71 -3 -5.14563 | CTACAGCAGTTGATT TATTAGTA ATTT TATTAATA TTTTTTGCTAGAGCA TERM 15 4865 - 4877 + G 70 -4.1 -4.69214 | TAGCAAGTTGTGGCG CCGAT AAT ATTGG TTTATTTGTTCCGTA cadD 4501 - 5118 + | CadD cadX 5137 - 5484 + | CadX SAP007 5566 - 5733 + | hypothetical protein TERM 16 5796 - 5769 - T 100 -15 -5.1101 | opp_overlap 5761 5769 CCAGCATCGAAAAAA TCCCCACACTAC TGCA ATAGTGTGGGGA TTGGTGCATTAATTG TERM 17 5769 - 5796 + T 100 -14.3 -3.23598 | opp_overlap 5769, overlap 5761 CCAGCATCGAAAAAA TCCCCACACTA CTGCAA TAGTGTGGGGA TTGGTGCATTAATTG SAP008 6876 - 5905 - | hypothetical protein TERM 18 6963 - 6945 - H 88 -9 -4.3739 | TATTTTCCTACAAAA CTTATCAT GAT ATGATAAG CGAGTCAATACTAAT SAP009 7000 - 7419 + | hypothetical protein TERM 19 7418 - 7404 - T 71 -5.8 -4.37506 | opp_overlap 7403 7404 ATTACTAAAGATAAA TAAAAC TAC GTTTTA ATTTTTACGTTATTA TERM 20 7723 - 7696 - T 85 -5.7 -5.43621 | gap 1, opp_overlap 7696 ATAAATGAGAAAAAA GCAACGCA-CTT TAAAT AAGATACGTTGC TTTTTCGATTGATGA blaZ 8790 - 7945 - | beta-lactamase blaR1 8897 - 10654 + | bla regulator protein blaR1 blaI 10644 - 11024 + | penicillinase repressor TERM 21 11159 - 11118 - f 95 -12 -3.85082 | gap 2, opp_overlap 11121 11123, overlap 11120 11123 11125 AAATATATTATTAAA GATGAGAGTGTCCAGAAAAT AACC ATTTTCTGGACACTCT--TC TTTTATGTCTAAATA TERM 22 11159 - 11120 - f 100 -13.8 -3.49884 | opp_overlap 11121 11123, overlap 11118 11123 11125 ATATATTATTAAAGA TGAGAGTGTCCAGAAAAT AACC ATTTTCTGGACACTCTTC TTTTATGTCTAAATA TERM 23 11121 - 11159 + F 100 -17.1 -4.61868 | gap 1, opp_overlap 11118 11120 11123 11125, overlap 11123 TATATTATTAAAGAT G-AGAGTGTCCAGAAAAT AACC ATTTTCTGGACACTCTTC TTTTATGTCTAAATA TERM 24 11156 - 11123 - f 100 -19.9 -2.88215 | opp_overlap 11121 11123, overlap 11118 11120 11125 TATTATTAAAGATGA GAGTGTCCAGAAAAT AACC ATTTTCTGGACACTC TTCTTTTATGTCTAA TERM 25 11123 - 11156 + F 100 -19.9 -4.41422 | opp_overlap 11123 11118 11120 11125, overlap 11121 TATTATTAAAGATGA GAGTGTCCAGAAAAT AACC ATTTTCTGGACACTC TTCTTTTATGTCTAA TERM 26 11154 - 11125 - f 100 -16.7 -2.98479 | opp_overlap 11123 11121, overlap 11123 11118 11120 TTATTAAAGATGAGA GTGTCCAGAAAAT AACC ATTTTCTGGACAC TCTTCTTTTATGTCT TERM 27 11738 - 11720 - gf 75 -4.7 -4.95155 | GGCAGACCAGAAAAA TTAAATC AAAAA GATTTAA ACTTACTTAAGACAC binL 11288 - 11881 + | DNA-invertase TERM 28 13247 - 13229 - gf 89 -3.1 -5.87996 | TAAGGAAGAAAAAAA TTGTGGT TATTC ACCTCAA GAAACGACTAAAAAC tnp 11853 - 13295 + | hypothetical protein sin 13288 - 14046 + | recombinase Sin arsR 14107 - 14421 + | arsenical resistance operon repressor arsB 14421 - 15710 + | arsenic efflux pump protein arsC 15728 - 16123 + | arsenate reductase TERM 29 16157 - 16131 - f 100 -12.5 -4.12397 | opp_overlap 16131 TGAGATAATCATAAA CACCTCTTATT TAGTT AATAAGAGGTG TTTTGCCATTTAAAG TERM 30 16131 - 16157 + F 100 -12.5 -4.24002 | opp_overlap 16131 TGAGATAATCATAAA CACCTCTTATT TAGTT AATAAGAGGTG TTTTGCCATTTAAAG SAP019 16503 - 16796 + | hypothetical protein TERM 31 16857 - 16814 - f 100 -20 -3.4493 | opp_overlap 16817 16820 16829, overlap 16815 16817 16820 16829 ACATATATTAATTAA GGAGAATAGACAGAATTAAG TAAA CTTAATTCTGTCTATTCTCT TGAAAGAGGCAATAT TERM 32 16856 - 16815 - f 100 -23.5 -2.66235 | opp_overlap 16817 16820 16829, overlap 16814 16817 16820 16829 CATATATTAATTAAG GAGAATAGACAGAATTAAG TAAA CTTAATTCTGTCTATTCTC TTGAAAGAGGCAATA TERM 33 16817 - 16854 + F 100 -20.3 -3.01712 | opp_overlap 16815 16814 16817 16820 16829, overlap 16820 16829 TATATTAATTAAGGA GAATAGACAGAATTAAG TAAA CTTAATTCTGTCTATTC TCTTGAAAGAGGCAA TERM 34 16854 - 16817 - f 100 -20.3 -2.8661 | opp_overlap 16817 16820 16829, overlap 16815 16814 16820 16829 TATATTAATTAAGGA GAATAGACAGAATTAAG TAAA CTTAATTCTGTCTATTC TCTTGAAAGAGGCAA TERM 35 16820 - 16851 + F 100 -16.2 -3.65812 | opp_overlap 16817 16815 16814 16820 16829, overlap 16817 16829 ATTAATTAAGGAGAA TAGACAGAATTAAG TAAA CTTAATTCTGTCTA TTCTCTTGAAAGAGG TERM 36 16851 - 16820 - f 100 -16.2 -3.57128 | opp_overlap 16820 16817 16829, overlap 16817 16815 16814 16829 ATTAATTAAGGAGAA TAGACAGAATTAAG TAAA CTTAATTCTGTCTA TTCTCTTGAAAGAGG TERM 37 18518 - 18474 - g 71 -5.3 -4.64464 | opp_overlap 18480 18481, overlap 18480 18481 18483 TAAATGAAACGAAAA CAAAAATGATAATAACAATAG TTA CTATTATTATTAACGTTTTCA TTCTTTTGATAGCTA TERM 38 18512 - 18480 - g 82 -4.3 -5.56372 | opp_overlap 18480 18481, overlap 18474 18481 18483 AAACGAAAACAAAAA TGATAATAACAATAG TTA CTATTATTATTAACG TTTTCATTCTTTTGA TERM 39 18480 - 18512 + G 70 -4.3 -4.67123 | opp_overlap 18474 18480 18481 18483, overlap 18481 AAACGAAAACAAAAA TGATAATAACAATAG TTA CTATTATTATTAACG TTTTCATTCTTTTGA TERM 40 18511 - 18481 - g 76 -7.8 -3.90163 | opp_overlap 18481 18480, overlap 18480 18474 18483 AACGAAAACAAAAAT GATAATAACAATAG TTA CTATTATTATTAAC GTTTTCATTCTTTTG TERM 41 18509 - 18483 - g 75 -9 -3.50051 | opp_overlap 18481 18480, overlap 18481 18480 18474 CGAAAACAAAAATGA TAATAACAATAG TTA CTATTATTATTA ACGTTTTCATTCTTT SAP020 16871 - 18805 + | hypothetical protein SAP021 18809 - 19120 + | hypothetical protein SAP022 19132 - 19758 + | hypothetical protein TERM 42 19842 - 19860 + F 100 -13.2 -5.31275 | opp_overlap 19842 AGTTTTTTTATTTAA GGACTGGA TTT TCCAGTCC TTTTTTGTGATGACA TERM 43 19860 - 19842 - f 100 -13.2 -3.05463 | opp_overlap 19842 AGTTTTTTTATTTAA GGACTGGA TTT TCCAGTCC TTTTTTGTGATGACA SAP023 19996 - 20373 + | truncated Pre protein SAP024 20313 - 20639 + | truncated Pre protein SAP025 20652 - 21206 + | truncated Pre protein SAP026 21529 - 21320 - | hypothetical protein rep 21570 - 22430 + | replication protein Rep TERM 44 22447 - 22431 - f 72 -8 -3.65314 | opp_overlap 22430 22439 CTGAATTGGGAATAA CGCAAC TTTTC GTTGCG AGTTGGTTAACTAAA SAP028 22517 - 22756 + | hypothetical protein TERM 45 23013 - 23039 + TF 100 -13.1 -5.18357 | opp_overlap 23013 TGTAAACGCACCAAA CCCCGAACTAT TCGCC GTAGTTCGGGG TTTTTTGGTGAATTG TERM 46 23039 - 23013 - Tf 100 -12.4 -3.82097 | opp_overlap 23013 TGTAAACGCACCAAA CCCCGAACTA TTCGCCG TAGTTCGGGG TTTTTTGGTGAATTG SAP030 23371 - 23261 - | hypothetical protein SAP029 23315 - 23500 + | hypotehtical protein TERM 47 23621 - 23590 - TR 100 -13.2 -5.04222 | opp_overlap 23590 TAATGAAAGTAAAAA GCCATAAATGCC TATATGAC GGCATTTATGGC TTTTTGTTTGGTTAA TERM 48 23590 - 23621 + Tr 100 -13.2 -5.38326 | opp_overlap 23590 TAATGAAAGTAAAAA GCCATAAATGCC TATATGAC GGCATTTATGGC TTTTTGTTTGGTTAA TERM 49 23703 - 23675 - TR 85 -8.3 -4.57353 | opp_overlap 23696 TCTCACTATATAAAA GACACTAAAATTT TAT AACTTTTAGTGCC TAATCAATTATTTTA SAP031 24459 - 23716 - | hypothetical protein