TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.664152 %AT, 2251917 nt, 11825 terms. Intergenic: 0.712831 %AT, H2T: 348528 nt, 2830 terms; T2T: 70006 nt, 1635 terms; H2H: 82270 nt, 1405 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|70725001|ref|NC_007168.1| Staphylococcus haemolyticus JCSC1435, complete genome (length 2685015) dnaA 508 - 1863 + | chromosomal replication initiation protein dnaN 2164 - 3297 + | DNA polymerase III subunit beta TERM 1 3317 - 3356 + F 100 -13.2 -4.35926 | gap 1, opp_overlap 3315 3314 3310 AAAAGGTATTAATTT GGAGTTACGAC-GAATT CAAAAGA AATTCTGTCGTAACTCC TTTTAAATTTAAACT SH0003 3676 - 3909 + | hypothetical protein recF 3906 - 5021 + | recombination protein F gyrB 5031 - 6965 + | DNA gyrase (topoisomerase II) subunit B gyrA 7063 - 9762 + | DNA gyrase (topoisomerase II) subunit A TERM 2 9849 - 9820 - T 100 -14.5 -4.1552 | opp_overlap 9820, overlap 9823 GATTCCTTCAACAAA TAAGACTTCCCTA ATAC CAGGGAAGTCTTA TTTTTATAGCTTATT TERM 3 9820 - 9849 + T 100 -13.8 -4.94222 | opp_overlap 9820 9823 GATTCCTTCAACAAA TAAGACTTCCCT AATACC AGGGAAGTCTTA TTTTTATAGCTTATT TERM 4 9846 - 9823 - T 100 -11.8 -4.20367 | opp_overlap 9820, overlap 9820 TCCTTCAACAAATAA GACTTCCCTA ATAC CAGGGAAGTC TTATTTTTATAGCTT SH0007 10565 - 9864 - | hypothetical protein TERM 5 11047 - 11033 - H 75 -5.8 -4.8048 | opp_overlap 11033 TTGCTATATTAAAAA TAACTT AAT AAGTTA TTGTTCGTGGGACAA TERM 6 11232 - 11261 + H 100 -15.1 -5.7946 | GGGTGGCAACGCGTA GACCACGTCCCTT GTGA AGGGGATGTGGTC TTTTTTTATTGAAAA TERM 7 12122 - 12090 - g 75 -4.9 -4.93296 | GTATTACCAGAAAAA TTCACTGCTCAAACA GCT TGTTTTCGTAGTGAA GCAGGATCAGCTGGT serS 11331 - 12617 + | seryl-tRNA synthetase TERM 8 12725 - 12694 - f 93 -11.1 -3.75169 | gap 1, opp_overlap 12694 TAGTAGCTTACTAAA CTGAGAAAATGCTC TTACC GAGC-TTTTCTCAG TTTTTTTCGTCCTTA TERM 9 12694 - 12725 + F 100 -11.1 -5.58074 | gap 1, opp_overlap 12694 TAGTAGCTTACTAAA CTGAGAAAATGCTC TTACC GAGC-TTTTCTCAG TTTTTTTCGTCCTTA TERM 10 13493 - 13515 + G 72 -9.2 -2.51133 | overlap 13492 GCATATTCATTTTGG GCACTAGCAA GTA TTGTTGGTGC GTTACTCGGTAAATA SH0009 13067 - 13762 + | hypothetical protein SH0010 13759 - 14088 + | hypothetical protein TERM 11 14358 - 14326 - f 75 -7.2 -4.09509 | gap 1, opp_overlap 14326, overlap 14317 AGTAATGGAGACAAA TCGCCTCATACTTTA ATAA TAGAGTAT-AGGCGA TTTTTTATTTAAAAG TERM 12 14326 - 14358 + F 100 -9.4 -5.63517 | gap 1, opp_overlap 14317 14326 AGTAATGGAGACAAA TCGCCTCATACTTTA ATAA TAGAGTAT-AGGCGA TTTTTTATTTAAAAG TERM 13 15268 - 15278 + G 71 -3.2 -5.17507 | TTCCAGATAATGTAG GTCA TGA TGGC TTTTTATTAAATTTT SH0011 14385 - 15353 + | hypothetical protein SH0012 15492 - 16403 + | hypothetical protein TERM 14 16864 - 16835 - g 73 -9.5 -2.8315 | gap 1, opp_overlap 16835, overlap 16834 ACAAGAAGTTGAAAT CGAACATGGTCAAT ATC ATT-ACCACGTTCG TCATTCAGAAGAAGA SH0013 16431 - 18398 + | hypothetical protein rplI 18395 - 18841 + | 50S ribosomal protein L9 TERM 15 19145 - 19173 + G 100 -11.8 -4.38712 | opp_overlap 19144 19143, overlap 19146 CACAATTGATTAATT CGACTCAGGAAG TGCTC CTTCCTGAGTCC TTTTATAGAGGTGCC TERM 16 19146 - 19172 + G 100 -15.3 -3.22906 | opp_overlap 19144 19143, overlap 19145 ACAATTGATTAATTC GACTCAGGAAG TGCTC CTTCCTGAGTC CTTTTATAGAGGTGC TERM 17 19413 - 19393 - g 72 -6.1 -4.29396 | overlap 19383 AACCATGCATTAAAA CGCAGATTA ATT CAAACTGCG GATAGTATTGCCAAC dnaC 19048 - 20448 + | replicative DNA helicase TERM 18 20459 - 20494 + F 100 -11.4 -5.70761 | opp_overlap 20476 CATAAAAATATTTTA CCGTATATTAAATGAT ATAA ATCGTTTAATGTGCGG TTTTTGTTTTGTTTT TERM 19 20889 - 20900 + G 70 -2.2 -5.252 | ATAAATTACATTTAG TGCC ATCA GGTA TTTTTTATAAAGATA purA 20726 - 22009 + | adenylosuccinate synthetase TERM 20 22293 - 22317 + F 100 -11.6 -6.06723 | AACATCATTTATTTG TAGGCATTGA TTCGT TCAATGCCTA TTTTTTTTTAGAAAC TERM 21 22657 - 22678 + F 100 -9.5 -5.66684 | opp_overlap 22675, overlap 22675 CCGTCGAGACCGTAT TGCTTATCC AAAA GGATAGGCA TTTTTTTATGCCTTC vicR 23176 - 23877 + | response regulator, VicR vicK 23890 - 25716 + | signal transduction two-component sensor histidine kinase, VicK SH0019 25706 - 27037 + | hypothetical protein TERM 22 27512 - 27493 - g 73 -7.2 -3.99374 | overlap 27497 GTTGATGAATAATAA TAAAGCGC GTCT ACGCTTTA ATATCAATGATGGTA SH0020 27038 - 27829 + | hypothetical protein TERM 23 27846 - 27880 + F 86 -7.2 -5.07523 | GAGCAGGAAGAATAG TAAGTGTGTGGGGCAA CGA TGGTCTCATGCACTTA TTTTATTTGTATGTG SH0021 27853 - 27948 + | hypothetical protein TERM 24 27981 - 28008 + F 81 -8.6 -4.07651 | TTAGAGGACTGGATT GTTTCGAATGAT GTGG ATTGTTCGAAAC TTCATTTTTTTAATT SH0022 28097 - 28897 + | hypothetical protein TERM 25 28911 - 28947 + F 100 -11.1 -6.08342 | opp_overlap 28911 28914 AATTATTTAGACGAA CGACCTACTTACAAA ATTAGTA TTTGTGAGTAGGTTG TTTTTTTATTTATTG orfX 29302 - 29781 + | hypothetical protein TERM 26 30002 - 29991 - g 77 -3 -5.4756 | AATTTGAATAAAAAA TTTC GTTG GAAA AATACAAGTTCAAGT SH0024 29835 - 30020 + | hypothetical protein tnp 30804 - 30130 - | transposase for IS431mec TERM 27 30173 - 30196 + g 82 -7.4 -4.58943 | opp_overlap 30172 30173 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 28 30759 - 30745 - G 76 -10 -2.90763 | TGCATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT TERM 29 31019 - 31031 + G 71 -7.7 -3.63694 | opp_overlap 31016 31019 AATTTTTATCAACGA GCTCA ACC TGAGC TTATTGCAAATAAAT SH0026 30884 - 31855 + | hypothetical protein SH0027 32215 - 32117 - | hypothetical protein TERM 30 32292 - 32336 + H 100 -18.1 -5.13741 | TAAAAACACTATGTT CTAGGCTGCTAATTCTCTGTA TTT TACAGGGGATAAGTAGCCTAG TTTTTGTTGAATTCG SH0028 32399 - 32566 + | hypothetical protein SH0029 32834 - 32977 + | hypothetical protein TERM 31 33046 - 33014 - T 84 -10.7 -2.63089 | opp_overlap 33015, overlap 33013 33011 GATGAGTCCAAATAT TGAGATTAAGCAACC TTA GGTTGTTTAATCTCT TTTTTTGTTGTTGAG TERM 32 33015 - 33045 + T 100 -16.4 -5.95946 | opp_overlap 33014 33013 33011 ATGAGTCCAAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 34335 - 33019 - | transposase for ISSha1 TERM 33 34277 - 34291 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 34 34452 - 34421 - R 100 -13.2 -5.20783 | opp_overlap 34421 ATTCAAACATAAAAA TTGGACTGATGATT TTTT AGTCATCAGTCCAA TTTATTATAGAGCCA TERM 35 34421 - 34452 + r 100 -15.4 -4.30719 | opp_overlap 34421 ATTCAAACATAAAAA TTGGACTGATGATT TTTT AGTCATCAGTCCAA TTTATTATAGAGCCA TERM 36 34521 - 34533 + r 71 -7.7 -3.59468 | ACAGGTGTTAAGTTG CTCCA ATA TGGAG TTGTCGTCTTGTTTT TERM 37 34541 - 34560 + r 70 -5.1 -4.65916 | ATATGGAGTTGTCGT CTTGTTT TATATT AAACAAG TTTTATTCAAATACA TERM 38 34837 - 34803 - R 70 -7.9 -3.35849 | gap 1, opp_overlap 34805, overlap 34801 34805 GTTATCAAATGAATA TATCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGATT TTATTGTTAGTTATT TERM 39 34805 - 34835 + r 100 -12.7 -4.95167 | gap 1, opp_overlap 34803 34801 34805 TATCAAATGAATATA TCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGA TTTTATTGTTAGTTA TERM 40 34835 - 34805 - R 86 -10.5 -3.24202 | gap 1, opp_overlap 34805, overlap 34803 34801 TATCAAATGAATATA TCCCAGCGGTTGAG ACGA CTCA-CTGCTGGGA TTTTATTGTTAGTTA SH0031 35547 - 34852 - | hypothetical protein TERM 41 35138 - 35118 - GR 74 -9.1 -2.8474 | opp_overlap 35118, overlap 35115 GTTCATTGACAAGGA CTGATTTCG CAT CGAAATCAA TGGTTAATGGACCAT SH0032 38191 - 35522 - | hypothetical protein TERM 42 37486 - 37498 + g 73 -9.1 -2.87026 | TGCCGCTGATAGCTA CCGCA ATA TGCGG TGTAATGTCGGTATG TERM 43 38544 - 38558 + G 80 -7.2 -4.47707 | TTGCTTTAAATGTGC CATCTA AAA TAGATG TTGTTTTTAATCCGA kdpA 38459 - 40135 + | potassium-transporting ATPase subunit A TERM 44 40647 - 40610 - g 89 -12.2 -3.18735 | opp_overlap 40622 GCAACAGTGGATGAA TCTGCGATTACAGGTG AATCTG CACCTGTAATCAAAGA AAGCGGTGGAGATTT TERM 45 41421 - 41411 - g 83 -6.8 -5.00616 | opp_overlap 41412 GGGGTGTCTAAAAAA GGTG GCA CACC GCTGGTTGTGCTTGA kdpB 40154 - 42175 + | hypothetical protein kdpC 42191 - 42748 + | hypothetical protein SH0036 42776 - 42922 + | hypothetical protein SH0037 43112 - 43429 + | hypothetical protein SH0038 43499 - 43651 + | hypothetical protein SH0039 43681 - 44172 + | hypothetical protein SH0040 44388 - 49079 + | hypothetical protein TERM 46 49146 - 49113 - f 89 -9.8 -3.74693 | opp_overlap 49114 49117 49122, overlap 49114 49117 49122 GTGGACTTTATTAAA GTAAGACAAGCTAA GTAAAA TTAGCTTGTCTTAT TATACATAAGATAAA TERM 47 49114 - 49145 + F 100 -13.3 -3.36327 | opp_overlap 49113 49114 49117 49122, overlap 49117 49122 TGGACTTTATTAAAG TAAGACAAGCTAA GTAAAA TTAGCTTGTCTTA TTATACATAAGATAA TERM 48 49145 - 49114 - f 100 -13.3 -2.84602 | opp_overlap 49114 49117 49122, overlap 49113 49117 49122 TGGACTTTATTAAAG TAAGACAAGCTAA GTAAAA TTAGCTTGTCTTA TTATACATAAGATAA TERM 49 49142 - 49117 - f 88 -10.6 -3.56972 | opp_overlap 49114 49117 49122, overlap 49114 49113 49122 ACTTTATTAAAGTAA GACAAGCTAA GTAAAA TTAGCTTGTC TTATTATACATAAGA TERM 50 49117 - 49142 + F 90 -10.6 -3.8211 | opp_overlap 49117 49114 49113 49122, overlap 49114 49122 ACTTTATTAAAGTAA GACAAGCTAA GTAAAA TTAGCTTGTC TTATTATACATAAGA TERM 51 49516 - 49501 - g 95 -4.8 -6.37666 | ATAAAATAAAAAAAA TCATTT TCGG AAATGA TAATAACTATATTCG TERM 52 49993 - 50005 + G 80 -2.7 -5.64274 | overlap 49984 ATATGTTCAACCATG TTGAT TAT ATCGA TTTTTTTATAACTGC SH0041 49188 - 50702 + | hypothetical protein TERM 53 51236 - 51226 - g 84 -4 -5.64873 | opp_overlap 51226 TTTAATAACAAAAAA GAAT TTT ATTC TTATTATTTAAGTCA SH0042 50695 - 52014 + | hypothetical protein TERM 54 52078 - 52051 - T 100 -10.6 -4.65838 | opp_overlap 52051 TATAGATTTTAAAAA GATGCCCTGGGT TATA AGCCAGAGCATC TTTTTAATAATAAGG TERM 55 52051 - 52078 + T 90 -8.4 -4.77036 | opp_overlap 52051 TATAGATTTTAAAAA GATGCCCTGGGT TATA AGCCAGAGCATC TTTTTAATAATAAGG TERM 56 52415 - 52380 - T 91 -10.5 -4.17417 | opp_overlap 52381, overlap 52381 52383 GGAATTAGACATAAA TTAGGAGTCCTTCAC AGAATA GCGAAGGACTCCCAT TAAATATATTATGGT TERM 57 52381 - 52414 + T 79 -9.6 -3.20633 | opp_overlap 52380 52381 52383 GAATTAGACATAAAT TAGGAGTCCTTCAC AGAATA GCGAAGGACTCCCA TTAAATATATTATGG TERM 58 52414 - 52381 - T 100 -14 -3.09727 | opp_overlap 52381, overlap 52380 52383 GAATTAGACATAAAT TAGGAGTCCTTCAC AGAATA GCGAAGGACTCCCA TTAAATATATTATGG TERM 59 52412 - 52383 - T 100 -14.4 -3.09517 | opp_overlap 52381, overlap 52381 52380 ATTAGACATAAATTA GGAGTCCTTCAC AGAATA GCGAAGGACTCC CATTAAATATATTAT TERM 60 52823 - 52810 - T 71 -3.9 -5.00851 | ATCAATGAAATAAAA TGAAA ACAA TTTCA AGAATACATTATAAA TERM 61 52894 - 52857 - T 75 -3.5 -5.43487 | opp_overlap 52861, overlap 52861 AAAGTATACAAAAAA TAAATGAGCGTATTTGT TTAA ACGTATACACTCATTTT TATTAAATTAATTTA TERM 62 52861 - 52890 + T 73 -4.3 -5.13741 | opp_overlap 52861 52857 TATACAAAAAATAAA TGAGCGTATTTGT TTAA ACGTATACACTCA TTTTTATTAAATTAA TERM 63 52890 - 52861 - T 73 -4.3 -5.16969 | opp_overlap 52861, overlap 52857 TATACAAAAAATAAA TGAGCGTATTTGT TTAA ACGTATACACTCA TTTTTATTAAATTAA SH0043 53925 - 52978 - | hypothetical protein SH0044 54927 - 54061 - | hypothetical protein TERM 64 54656 - 54666 + g 80 -2.6 -5.66229 | TCAATTGTACCTATG TTAA TAT TTAA TTTTTTATTGTTGCT SH0045 56104 - 54914 - | hypothetical protein TERM 65 56360 - 56374 + G 76 -10 -2.90763 | AAGGATGTTATCACT GTAGCC GTT GGCTAC TATCTAAGATATGCA tnp 56315 - 56458 + | transposase for IS431mec tnp 56624 - 56716 + | transposase for IS431mec TERM 66 56949 - 56920 - g 75 -4.9 -4.96848 | opp_overlap 56922 56923, overlap 56923 CGGTCTATATAAAAA GAACCGCAGGTCT CTTC AGATCTGCGGATT TTCGCCATGCCATGA TERM 67 56922 - 56947 + G 93 -9.7 -4.11394 | opp_overlap 56920 56923, overlap 56923 GTCTATATAAAAAGA ACCGCAGGTCT CTTC AGATCTGCGGA TTTTCGCCATGCCAT TERM 68 56923 - 56946 + G 88 -13.2 -3.06515 | opp_overlap 56923 56920, overlap 56922 TCTATATAAAAAGAA CCGCAGGTCT CTTC AGATCTGCGG ATTTTCGCCATGCCA TERM 69 56946 - 56923 - g 100 -11 -4.58943 | opp_overlap 56922 56923, overlap 56920 TCTATATAAAAAGAA CCGCAGGTCT CTTC AGATCTGCGG ATTTTCGCCATGCCA tnp 56738 - 56989 + | transposase for IS431mec TERM 70 56981 - 56967 - T 71 -7.2 -3.74693 | CGCCATGCCATGAAA TTAGCA TCA TGCTAA CAAGTTAACACAAAG SH0049 57477 - 57049 - | hypothetical protein TERM 71 57544 - 57522 - H 79 -9.3 -3.17238 | AGAGTATATACTTAA TTAGTGTCA TCTAT TGACACTAA AAGGAGAATAATAAT TERM 72 57886 - 57876 - g 80 -2.6 -5.66989 | GAAATATTAAAAAAA TTAT ATA ATAA CTCGAATAAAAAAGA SH0050 57558 - 58487 + | hypothetical protein SH0051 58521 - 58619 + | hypothetical protein SH0052 58649 - 60637 + | hypothetical protein TERM 73 60647 - 60668 + F 100 -10.9 -4.95876 | opp_overlap 60644 60641 60647 CAATAACTATAATGA GCCAGCTCA AGAA TGAGTTGGC TTTTTAATTGTAATT TERM 74 60668 - 60647 - f 71 -8.7 -2.91976 | opp_overlap 60647, overlap 60644 60641 CAATAACTATAATGA GCCAGCTCA AGAA TGAGTTGGC TTTTTAATTGTAATT TERM 75 61654 - 61631 - g 75 -4.7 -4.98672 | gap 1 TCGAAAAATATAAAA CAATGCC-TA CGCCT TACGGCATTG AACATGATATGAGCG SH0053 60832 - 61941 + | hypothetical protein SH0054 61934 - 62302 + | hypothetical protein SH0055 62302 - 63918 + | hypothetical protein TERM 76 64027 - 63994 - f 78 -8.9 -3.24166 | opp_overlap 63989 63995 63998, overlap 63985 63981 63980 63989 63997 AGGTAAGTAATCTAA TTACGTACTACAGGC AGTT GCCTGTAGTACTCAT ATGATTAAGTGGTAA TERM 77 63995 - 64026 + F 80 -10.2 -2.92668 | opp_overlap 63985 63981 63980 63994 63989 63997, overlap 63989 63998 GGTAAGTAATCTAAT TACGTACTACAGGC AGTT GCCTGTAGTACTCA TATGATTAAGTGGTA TERM 78 64024 - 63997 - f 100 -12.8 -2.80398 | opp_overlap 63995 63989 63998, overlap 63981 63980 63994 63989 TAAGTAATCTAATTA CGTACTACAGGC AGTT GCCTGTAGTACT CATATGATTAAGTGG TERM 79 63998 - 64023 + F 100 -16.3 -2.7044 | opp_overlap 63981 63980 63997 63994 63989, overlap 63995 63989 AAGTAATCTAATTAC GTACTACAGGC AGTT GCCTGTAGTAC TCATATGATTAAGTG TERM 80 64089 - 64116 + F 70 -8.6 -2.66316 | gap 1, opp_overlap 64098, overlap 64086 TATATTATCTATATG TTGTTACAAGACC GAT GGTCT-GTAGCAA TAATCTAATAAAAGG TERM 81 65128 - 65114 - g 71 -3.5 -5.1417 | TTATAAAACGAAAAA GTCCA AAGAA CGGAC AATCAAACGCTATTA TERM 82 65679 - 65667 - g 71 -6.3 -4.15632 | ATTACGACAGATAAA CAAGT AAA ACTTG TAAGGTATAAAATTG TERM 83 65706 - 65737 + G 78 -2.2 -5.64274 | overlap 65708 ATTGATGAAAGTCTT ATCCCTCAATCATT GAAA AAAGATTGGGGGTC TTTTTTTATGCCTAA TERM 84 65708 - 65735 + G 93 -9.2 -4.46105 | overlap 65706 TGATGAAAGTCTTAT CCCTCAATCATT GAAA AAAGATTGGGGG TCTTTTTTTATGCCT ccrC 64143 - 65819 + | staphylococcal casette chromosome site specific recombinase CcrC TERM 85 66038 - 66019 - f 76 -8 -3.84719 | ATGCCTAAATTTAAA TTTGTGAT AAAT ATCACAAA CGAAAACAGAATTGA SH0057 66170 - 66508 + | hypothetical protein TERM 86 66843 - 66876 + G 70 -2.4 -5.25699 | opp_overlap 66845, overlap 66844 66845 ATTCATTACCTAAGA AAGTCTACGTCATT CGTGAA GATGGCGTAGACGC TTTTTATTATGTGAT TERM 87 66874 - 66845 - g 71 -6.5 -4.21974 | opp_overlap 66844 66843 66845 TCATTACCTAAGAAA GTCTACGTCAT TCGTGAAG ATGGCGTAGAC GCTTTTTATTATGTG TERM 88 66845 - 66874 + G 73 -9.4 -2.83191 | opp_overlap 66845, overlap 66844 66843 TCATTACCTAAGAAA GTCTACGTCATT CGTGAA GATGGCGTAGAC GCTTTTTATTATGTG SH0058 66602 - 66913 + | hypothetical protein SH0059 66931 - 67434 + | hypothetical protein SH0060 67448 - 67669 + | hypothetical protein TERM 89 67683 - 67732 + F 77 -2.9 -5.69023 | opp_overlap 67690 67692, overlap 67684 67690 67692 GAAATGTATTTTTTA ATAAAACTAGAGCATTCTTCACT TTGT GGTGAGGGATGCTCTCTATTTAA TTTTTTTGCTATTTT TERM 90 67690 - 67725 + F 89 -9.8 -3.84105 | opp_overlap 67690 67692, overlap 67684 67683 67692 ATTTTTTAATAAAAC TAGAGCATTCTTCACT TTGT GGTGAGGGATGCTCTC TATTTAATTTTTTTG TERM 91 67692 - 67723 + F 95 -12.4 -3.4556 | opp_overlap 67690 67692, overlap 67690 67684 67683 TTTTTAATAAAACTA GAGCATTCTTCACT TTGT GGTGAGGGATGCTC TCTATTTAATTTTTT SH0061 67807 - 68373 + | hypothetical protein TERM 92 68395 - 68445 + T 100 -9.3 -5.5604 | gap 1, opp_overlap 68404, overlap 68398 68399 68404 TATGAATTATCTTCC TTAA-TATAAGAGCATCCTTCACT TTGC GGTGAGGGATGCTCTTTTAGTTTA TTTTTTATTGATTAC TERM 93 68398 - 68441 + T 100 -12.6 -5.20735 | opp_overlap 68404, overlap 68395 68399 68404 GAATTATCTTCCTTA ATATAAGAGCATCCTTCACT TTGC GGTGAGGGATGCTCTTTTAG TTTATTTTTTATTGA TERM 94 68399 - 68440 + T 100 -16.1 -3.70001 | opp_overlap 68404, overlap 68398 68395 68404 AATTATCTTCCTTAA TATAAGAGCATCCTTCACT TTGC GGTGAGGGATGCTCTTTTA GTTTATTTTTTATTG TERM 95 68404 - 68435 + T 100 -16 -4.78512 | opp_overlap 68404, overlap 68399 68398 68395 TCTTCCTTAATATAA GAGCATCCTTCACT TTGC GGTGAGGGATGCTC TTTTAGTTTATTTTT TERM 96 68435 - 68404 - T 100 -13.1 -3.65812 | opp_overlap 68404 68399 68398 68395 TCTTCCTTAATATAA GAGCATCCTTCAC TTTGCG GTGAGGGATGCTC TTTTAGTTTATTTTT hsdR 71569 - 68450 - | type I restriction-modification system restriction subunit hsdS 72776 - 71553 - | hypothetical protein hsdM 74280 - 72766 - | type I restriction-modification system DNA methylase TERM 97 74234 - 74253 + g 76 -4.4 -5.06414 | gap 1, overlap 74239 ATGCTTCCTCTCAAT TTATCGGCA GCT TGCC-ATAA TTTTTCTTCAAAACC SH0065 74430 - 74537 + | hypothetical protein SH0066 74494 - 74562 + | hypothetical protein TERM 98 74666 - 74653 - f 76 -4.5 -5.30448 | opp_overlap 74653 AAACAAATAGAAAAA GGAGA GGTA CCTCC TTTTAACTTTAAACA TERM 99 74765 - 74755 - g 71 -5.4 -4.50241 | AAATATGAATTAAAA GCTA TTA TAGC TCCAGGAATGATAAG SH0067 74710 - 75429 + | hypothetical protein SH0068 76322 - 75426 - | hypothetical protein TERM 100 76575 - 76543 - R 100 -10.7 -5.59879 | opp_overlap 76546, overlap 76546 CATAAAGAGAAAAAA GAACCCCTAAAAAGT TCA ACTTTTTGGGGGTTA CTTACTATTAAGAAG TERM 101 76546 - 76572 + r 100 -14.6 -3.45768 | opp_overlap 76543 76546 AAAGAGAAAAAAGAA CCCCTAAAAAGT TCA ACTTTTTGGGGG TTACTTACTATTAAG TERM 102 76572 - 76546 - R 100 -12.4 -4.8277 | opp_overlap 76546, overlap 76543 AAAGAGAAAAAAGAA CCCCTAAAAAGT TCA ACTTTTTGGGGG TTACTTACTATTAAG SH0069 78018 - 76600 - | hypothetical protein SH0070 78646 - 78107 - | hypothetical protein TERM 103 78830 - 78788 - R 80 -5.8 -5.1523 | gap 1, overlap 78789 78790 TTCAGAATATAAAAA GC-CTCCTAAACGTTAGAT ACAGAA ACATAACGTTTAAGAGAGC GTAGGGGGAAGGGTA SH0071 80511 - 79186 - | hypothetical protein malL 82213 - 80495 - | oligosaccharide alpha-1,6-glucosidase TERM 104 82266 - 82241 - R 95 -10.7 -4.40003 | opp_overlap 82238, overlap 82235 TTCTATAAAGAGAAA TTTTTACTCAA ACGT TTGAGTAAAAA TAATAATTAAAAATC TERM 105 82308 - 82270 - R 88 -9.2 -4.47707 | opp_overlap 82272 82280, overlap 82280 TTTGAGTAAAAATAA TAATTAAAAATCTAAGTT AAA AACTTAGATTTTTAAATG TGCTTAATTGTTTCA TERM 106 82272 - 82306 + r 95 -11.8 -3.0003 | opp_overlap 82270 82280, overlap 82280 TGAGTAAAAATAATA ATTAAAAATCTAAGTT AAA AACTTAGATTTTTAAA TGTGCTTAATTGTTT TERM 107 82298 - 82280 - R 95 -9 -5.03201 | opp_overlap 82272 82280, overlap 82270 AATAATAATTAAAAA TCTAAGTT AAA AACTTAGA TTTTTAAATGTGCTT TERM 108 82280 - 82298 + r 93 -9 -4.72333 | opp_overlap 82280 82270, overlap 82272 AATAATAATTAAAAA TCTAAGTT AAA AACTTAGA TTTTTAAATGTGCTT SH0073 83300 - 82302 - | hypothetical protein SH0074 83965 - 83480 - | lactose operon transcription activator TERM 109 83792 - 83778 - G 78 -7.2 -4.42386 | opp_overlap 83777 83778 83790 TTTGTATTTATAAAA TCAACA GCA TGTTGA ATATCTTCATTTACA SH0075 84288 - 84944 + | hypothetical protein TERM 110 85204 - 85218 + T 71 -7.2 -3.74693 | CTTTGTGTTAACTTG TTAGCA TGA TGCTAA TTTCATGGCATGGCG tnp 85561 - 85196 - | transposase for IS431mec TERM 111 85239 - 85262 + gT 82 -7.4 -4.58943 | opp_overlap 85239 85238 TGGCATGGCGAAAAT CCGTAGATCT GGAG AGACCTGCGG TTCTTTTTATATAGA tnp 85857 - 85480 - | transposase for IS431mec TERM 112 85812 - 85798 - GR 80 -10 -2.90763 | TGCATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT TERM 113 85983 - 86029 + r 70 -4.8 -4.71482 | gap 1 AAATAGTGTTAAAAA GGCATAGTGTATTAATATTAC TGAATT GTAAT-TTGATATGTTATGCC TTTTTAAGATTTAAT SH0078 86622 - 86050 - | hypothetical protein SH0079 86765 - 86887 + | hypothetical protein TERM 114 86902 - 86932 + T 100 -12.8 -5.95946 | opp_overlap 86901 86900 ATGAGTCCAAATATT GAGATTAAGCAACT TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 88222 - 86906 - | transposase for ISSha1 TERM 115 88164 - 88178 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 116 88339 - 88309 - H 100 -14.2 -5.36364 | opp_overlap 88309 TCAAAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCA TERM 117 88309 - 88339 + H 100 -16.4 -4.30719 | opp_overlap 88309 TCAAAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCA SH0081 88421 - 88990 + | hypothetical protein SH0082 88987 - 90081 + | hypothetical protein TERM 118 90155 - 90124 - f 100 -10.3 -5.07971 | opp_overlap 90124 90154 TAAAATAAGCAAAAA GCCCATAATTAGC GGATAT GTTAATTATGGGC TTTCATAATAGAGAG TERM 119 90124 - 90155 + F 100 -13.2 -3.78775 | opp_overlap 90124, overlap 90154 TAAAATAAGCAAAAA GCCCATAATTAGCG GATA TGTTAATTATGGGC TTTCATAATAGAGAG SH0083 90323 - 90535 + | hypothetical protein TERM 120 90783 - 90745 - g 100 -12.1 -4.27617 | opp_overlap 90740 90748, overlap 90748 GATATTTCACCAAAA GAACTATTAGAATTCTT GGAAA AAGAATTCTAATAGTTT GGCGTTTAAGTATTG TERM 121 90748 - 90780 + G 100 -13.8 -3.72363 | opp_overlap 90748 90745, overlap 90740 ATTTCACCAAAAGAA CTATTAGAATTCTT GGAAA AAGAATTCTAATAG TTTGGCGTTTAAGTA TERM 122 90780 - 90748 - g 100 -13.8 -4.25658 | opp_overlap 90740 90748, overlap 90745 ATTTCACCAAAAGAA CTATTAGAATTCTT GGAAA AAGAATTCTAATAG TTTGGCGTTTAAGTA SH0084 90523 - 90777 + | hypothetical protein TERM 123 91122 - 91096 - T 100 -14.6 -4.88067 | ATTTATTGATAAAAA GCCACAATCTCA TGT TAAGATTGTGGC GCTAAAATTTAATAC TERM 124 91124 - 91149 + T 80 -6.4 -4.89852 | GTTAAGATTGTGGCG CTAAAATTTA ATACTG TAAATTTTAG TTTTTATAAATATCA SH0085 92876 - 91146 - | hypothetical protein TERM 125 91334 - 91347 + g 82 -5.3 -5.35459 | TAATAACCTTTGTAA TAACC GTAT GGTTA TTTTTTCTAATATGT SH0086 94356 - 92860 - | hypothetical protein tnp 95419 - 94745 - | transposase for IS431mec TERM 126 94788 - 94811 + g 82 -7.4 -4.58943 | opp_overlap 94787 94788 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 127 95374 - 95360 - G 76 -10 -2.90763 | TGTATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT SH0088 95677 - 95844 + | hypothetical protein TERM 128 95901 - 95948 + F 81 -3.2 -5.80817 | gap 2, opp_overlap 95901 CTAACTCGAAATAAA TAAGCATATCAC--TAAACT GATTTTTTAA AGTTTACAGTGATATGCTTA TTTTTTTATCTTACG TERM 129 96138 - 96119 - f 72 -5.8 -4.45399 | AGAGGAATAGTAAAA GCAATTCT AAGT AAAATTGC AGATAAGAGGTTTGT SH0089 96761 - 97504 + | hypothetical protein SH0090 97601 - 98029 + | hypothetical protein TERM 130 98027 - 98077 + T 100 -15.9 -3.35912 | gap 1, opp_overlap 98027 98030 98035, overlap 98030 98035 CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA TERM 131 98077 - 98027 - T 100 -15.9 -2.67428 | gap 1, opp_overlap 98027 98030 98035, overlap 98030 98035 CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA TERM 132 98074 - 98030 - T 100 -13.2 -3.48153 | gap 1, opp_overlap 98027 98030 98035, overlap 98027 98035 ATTAATAATTCATAA TAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTG TTATTCATCTATATC TERM 133 98030 - 98074 + T 100 -13.2 -3.81089 | gap 1, opp_overlap 98030 98027 98035, overlap 98027 98035 ATTAATAATTCATAA TAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTG TTATTCATCTATATC TERM 134 98035 - 98069 + T 100 -10.9 -4.93661 | gap 1, opp_overlap 98030 98027 98035, overlap 98030 98027 TAATTCATAATAAAA CAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTG TTTTGTTATTCATCT TERM 135 98069 - 98035 - T 100 -13.1 -4.80959 | gap 1, opp_overlap 98035 98030 98027, overlap 98030 98027 TAATTCATAATAAAA CAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTG TTTTGTTATTCATCT mecA 100081 - 98075 - | penicillin binding protein 2 prime TERM 136 98906 - 98917 + g 74 -2.2 -5.48063 | AATCTGGAACTTGTT GAGC AGAG GTTC TTTTTTATCTTCGGT TERM 137 100101 - 100132 + H 78 -8.2 -4.04206 | opp_overlap 100101 100103, overlap 100103 ATCCTCCTTATATAA GACTACATTTGTAG TATA TTACAAATGTAGTA TTTATGTCAAAATAA TERM 138 100132 - 100101 - H 70 -7.5 -3.48395 | opp_overlap 100101 100103, overlap 100103 ATCCTCCTTATATAA GACTACATTTGTA GTATAT TACAAATGTAGTA TTTATGTCAAAATAA TERM 139 100130 - 100103 - H 83 -10.1 -3.31726 | opp_overlap 100101 100103, overlap 100101 CCTCCTTATATAAGA CTACATTTGTA GTATAT TACAAATGTAG TATTTATGTCAAAAT TERM 140 100103 - 100130 + H 90 -10.8 -3.615 | opp_overlap 100103 100101, overlap 100101 CCTCCTTATATAAGA CTACATTTGTAG TATA TTACAAATGTAG TATTTATGTCAAAAT SH0092 100199 - 100291 + | mecRI TERM 141 100374 - 100388 + G 76 -10 -2.90763 | AAGGATGTTATCACT GTAGCC GTT GGCTAC TATCTAAGATATGCA TERM 142 100936 - 100961 + G 81 -8.3 -4.11216 | opp_overlap 100934 100937, overlap 100937 CTCTATATAAAAAGA ACCGTAGGTCT CTTC AGATCTACGGA TTTTCCCCATGCCAC TERM 143 100960 - 100937 - g 100 -9.6 -4.58943 | opp_overlap 100936 100937, overlap 100934 TCTATATAAAAAGAA CCGTAGGTCT CTTC AGATCTACGG ATTTTCCCCATGCCA TERM 144 100937 - 100960 + G 85 -11.8 -3.06515 | opp_overlap 100937 100934, overlap 100936 TCTATATAAAAAGAA CCGTAGGTCT CTTC AGATCTACGG ATTTTCCCCATGCCA tnp 100329 - 101003 + | transposase for IS431mec SH0094 101634 - 101287 - | hypothetical protein SH0095 101712 - 102395 + | hypothetical protein TERM 145 103023 - 103043 + G 73 -9.1 -2.93073 | overlap 103027 CAAGGTCACGAATTC CAAATCATC AAT GGTGATTTG TCATTATTAGACGCA SH0096 102417 - 103082 + | hypothetical protein SH0097 103086 - 104090 + | hypothetical protein SH0098 104099 - 104464 + | hypothetical protein TERM 146 104479 - 104509 + F 100 -11.2 -5.32699 | overlap 104480 AGACTTATCATAGCC ACGCCTGGAACA TTACTTT TGTTCCAGGCGA TTTTTTAATATTTAC TERM 147 104480 - 104508 + F 100 -14.7 -3.77993 | overlap 104479 GACTTATCATAGCCA CGCCTGGAACA TTACTTT TGTTCCAGGCG ATTTTTTAATATTTA TERM 148 104713 - 104692 - f 82 -6.1 -5.18297 | opp_overlap 104692 104695 TAAGAATAAATAAAA TAATTATAT TTTC ATATAATTA TTATGTGGCATTGTA TERM 149 104991 - 104968 - f 78 -9.8 -2.75385 | opp_overlap 104966 104963, overlap 104967 AATATATGATACAAT TCATTCAAAT ATAT ATTTGAATGA GGTGCTCTATGGTTC cadD 105000 - 105617 + | cadmium binding protein CadD cadX 105636 - 105977 + | hypothetical protein TERM 150 105979 - 106017 + T 72 -6.9 -4.07533 | opp_overlap 105985 105989, overlap 105985 105989 AATGTATGACTTAAA TATAAAGAAACGCTC ACATTAAAC GAGCGTTTCTTTGAA TTCTTGTATTCTTTT TERM 151 106011 - 105985 - T 88 -9.5 -4.35044 | opp_overlap 105979 105985 105989, overlap 105989 TGACTTAAATATAAA GAAACGCTCAC ATTAA ACGAGCGTTTC TTTGAATTCTTGTAT TERM 152 105985 - 106011 + T 76 -8.1 -3.88178 | opp_overlap 105985 105989, overlap 105979 105989 TGACTTAAATATAAA GAAACGCTC ACATTAAAC GAGCGTTTC TTTGAATTCTTGTAT arsC 106398 - 105997 - | arsenate reductase arsB 107705 - 106416 - | arsenical pump membrane protein arsR 108022 - 107705 - | arsenical resistance operon repressor TERM 153 108202 - 108220 + H 79 -9.6 -3.30918 | opp_overlap 108201, overlap 108200 108204 TAAATCGAAAACATT TATACCCC TAT GGGGTATG TGTTATAGTATAAGT TERM 154 108204 - 108218 + H 83 -10 -3.2178 | opp_overlap 108201, overlap 108202 108200 AATCGAAAACATTTA TACCCC TAT GGGGTA TGTGTTATAGTATAA SH0104 108332 - 108619 + | hypothetical protein TERM 155 109024 - 109014 - g 77 -5.4 -4.94243 | CCAAAAAAATCAAAA TGAC AAC GTCA TCGGGGGTTCTATTA SH0105 108805 - 110346 + | hypothetical protein TERM 156 110669 - 110635 - g 77 -8.8 -3.66401 | opp_overlap 110640 110642 CTCAGAAAGGAAAGA CAGAGTTTTACAAAAA TAA TTTTTCTAATACTCTG GGCTACAATGGAAAT SH0106 110361 - 111794 + | hypothetical protein SH0107 111814 - 112296 + | hypothetical protein TERM 157 112385 - 112336 - T 84 -6.9 -5.1104 | gap 1, opp_overlap 112336, overlap 112326 AAATAGATATAAAAA TATCCCCCTTAATCAATAAT TTAAATAACTT ATTATTG-TTAAGGAGGATA TTTTTTAGTGTGTAA TERM 158 112336 - 112385 + T 77 -4.7 -5.24989 | gap 1, opp_overlap 112326 112336 AAATAGATATAAAAA TATCCCCCTTAATCAATAAT TTAAATAACTT ATTATTG-TTAAGGAGGATA TTTTTTAGTGTGTAA TERM 159 112494 - 112472 - T 100 -12.8 -5.66229 | opp_overlap 112485, overlap 112486 ATTAATAATAAAAAA GCGTCCCAAT GAT ATTGAGACGC TCAAAGTTTATCTAG arsC 112897 - 112502 - | arsenate reductase SH0109 114208 - 112916 - | arsenical pump membrane protein arsR 114522 - 114208 - | arsenical resistance operon repressor SH0111 116392 - 114662 - | arsenical pump-driving ATPase TERM 160 116334 - 116324 - G 73 -4 -5.1861 | opp_overlap 116324 TTTACCAGTAAAAAA CAAA TAT TTTG TTAACTCAATGTTAT arsD 116720 - 116373 - | hypothetical protein TERM 161 116932 - 116963 + H 80 -9.8 -2.88663 | opp_overlap 116922 116937 116941, overlap 116937 AGATATTGATTTATA TTTAATATATCAAA AAAA TTTGATGTATTAAA TATATAAAACTACGT SH0113 117002 - 117196 + | hypothetical protein SH0114 117242 - 117562 + | hypothetical protein TERM 162 117553 - 117567 + F 91 -7.2 -5.23316 | opp_overlap 117555 AGATACTTGTTGTAA GATACT TTA AGTATC TTTTTTAATGTAGTA TERM 163 117583 - 117626 + F 95 -12.2 -3.27525 | opp_overlap 117587, overlap 117572 117578 117587 117591 TTTTTTAATGTAGTA TTAATCAATTTTTTTTGATT AATA AATCAAGAAATATTGATTAA TTAAATTTGGAGGCA TERM 164 117587 - 117622 + F 75 -8.6 -3.43217 | opp_overlap 117587, overlap 117583 117578 117591 TTAATGTAGTATTAA TCAATTTTTTTTGATT AATA AATCAAGAAATATTGA TTAATTAAATTTGGA TERM 165 117787 - 117774 - g 76 -2.5 -5.55769 | TTTCAGAAGAAAAAA TAAAA CAAT TTTTA AGTAAACCTAATCAA TERM 166 117832 - 117847 + G 75 -4.7 -5.01823 | TTTGGGAATGGCTTT TGGTG CGATGA CACCA TTTTGTTCTTGTTCT SH0115 117650 - 118534 + | hypothetical protein SH0116 118548 - 118673 + | hypothetical protein TERM 167 118754 - 118712 - f 100 -9.4 -4.67607 | opp_overlap 118713 118716, overlap 118713 CTTCTAATAAATAAA TGAACGACAAATTCCA ATGTAATAGTA TGGAATTTGTCGTTCT TTCGTTTCAGTTAAG TERM 168 118753 - 118713 - f 100 -12.9 -3.39841 | opp_overlap 118713 118716, overlap 118712 TTCTAATAAATAAAT GAACGACAAATTCCA ATGTAATAGTA TGGAATTTGTCGTTC TTTCGTTTCAGTTAA TERM 169 118713 - 118753 + F 100 -12.9 -4.10672 | opp_overlap 118713 118712, overlap 118716 TTCTAATAAATAAAT GAACGACAAATTCCA ATGTAATAGTA TGGAATTTGTCGTTC TTTCGTTTCAGTTAA TERM 170 118716 - 118750 + F 81 -8.8 -4.15998 | opp_overlap 118713 118712, overlap 118713 TAATAAATAAATGAA CGACAAATTCCA ATGTAATAGTA TGGAATTTGTCG TTCTTTCGTTTCAGT TERM 171 118877 - 118833 - f 100 -12.4 -4.8622 | gap 1, opp_overlap 118833 GGCGTTAATTAAAAA CCGCATCATTAACCGATACGC AGAA GCATATC-ATAAATGATGCGG TTTTTTAATGATTGA TERM 172 118833 - 118877 + F 93 -8 -5.2189 | gap 1, opp_overlap 118833 GGCGTTAATTAAAAA CCGCATCATTAACCGATACGC AGAA GCATATCA-TAAATGATGCGG TTTTTTAATGATTGA SH0117 119026 - 119511 + | hypothetical protein SH0118 119688 - 120101 + | type I restriction enzyme restriction chain tnp 120817 - 120143 - | transposase for IS431mec TERM 173 120183 - 120212 + g 77 -5.7 -4.96848 | opp_overlap 120185 120186, overlap 120186 TCGTGGCATGGCGAA AATCCGTAGATCT GAAG AGATCTGCGGTTC TTTTTATATAGAGCG TERM 174 120209 - 120186 - G 77 -9.6 -3.06515 | opp_overlap 120183 120186, overlap 120185 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 175 120186 - 120209 + g 100 -11.8 -4.58943 | opp_overlap 120186 120185, overlap 120183 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 176 120772 - 120758 - G 76 -10 -2.90763 | TGCATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCCTT TERM 177 120922 - 120880 - H 74 -4.2 -5.3671 | gap 1, opp_overlap 120880 AACAGAACCAAAAAA CGCATCACGTACCGATAAG TAGAAG CGTATC-GTAAGTGAGGCG GGTTTTATTTATTAT TERM 178 121561 - 121586 + G 74 -6.3 -4.37886 | TTAAAAGGATCATCC GTAGGTTCTAA AAAT TTAGAATTTAC TTTTGTAGAAAATAA SH0120 121117 - 121665 + | hypothetical protein SH0121 121662 - 121829 + | hypothetical protein TERM 179 121877 - 121912 + F 93 -9.9 -4.58085 | opp_overlap 121881, overlap 121881 TTATATGGAAATTCA TAAAGCATCCTTCAT CACAAA GTGAAGGGTGCTTTG TTTATTTATAAGTGT TERM 180 121881 - 121908 + F 95 -8.5 -4.83246 | opp_overlap 121881, overlap 121877 ATGGAAATTCATAAA GCATCCTTCAT CACAAA GTGAAGGGTGC TTTGTTTATTTATAA SH0122 122020 - 122907 + | hypothetical protein TERM 181 122974 - 122939 - f 87 -11.4 -2.76291 | opp_overlap 122939, overlap 122943 TAATGTGAAAATTCA TAAAGCATCCCTCA TCGCAAAG TGAAGGATGCTTTA TTTTTATTATGATAA TERM 182 122939 - 122974 + F 100 -9.9 -5.22006 | opp_overlap 122939 122943 TAATGTGAAAATTCA TAAAGCATCCCTCAT CGCAAA GTGAAGGATGCTTTA TTTTTATTATGATAA TERM 183 122970 - 122943 - f 75 -7.8 -4.06179 | opp_overlap 122939, overlap 122939 GTGAAAATTCATAAA GCATCCCTCA TCGCAAAG TGAAGGATGC TTTATTTTTATTATG SH0123 123416 - 123940 + | hypothetical protein TERM 184 123981 - 124002 + T 100 -13.1 -5.6473 | opp_overlap 123981 AAGCTTATATGACAA TCCAACACG ATCT CGTGTTGGA TTTTTTTAGTGTTAT TERM 185 124002 - 123981 - T 100 -13.1 -3.47345 | opp_overlap 123981 AAGCTTATATGACAA TCCAACACG ATCT CGTGTTGGA TTTTTTTAGTGTTAT SH0124 124892 - 124014 - | hypothetical protein TERM 186 124538 - 124518 - G 70 -8.3 -3.28924 | TATCTTCTCGTACAA CTTTGCATC AAT GATGCCAAG CATACTTCTAATAGT TERM 187 124774 - 124798 + g 70 -4.3 -4.78752 | TCGACACTCATTTTT CCGAATTCATT TAT AATTAATGCGG TTTTTAAGTTATGAT TERM 188 125474 - 125463 - g 70 -4.4 -4.67982 | opp_overlap 125463 CCGTAGCTAAGAAAA TTGC AAAA GCAA TTAATGATAAAGATA TERM 189 125929 - 125911 - g 76 -7.6 -3.95214 | overlap 125909 125922 ACCTAGCCAAAAAGA TTTAACAA ATA TTGTTAAA CAAATTAAAGAAGAT SH0125 125159 - 126142 + | hypothetical protein TERM 190 126181 - 126206 + F 87 -8.3 -4.67607 | opp_overlap 126181 AATGCTTCATATCAA GGCCTCGTGAT GATA GTCATGAGGTC TTTATTTATTAGAAG TERM 191 126240 - 126224 - f 86 -9.5 -3.8512 | overlap 126231 TATTTATTAGAAGAA GAGGTAA GTC TTACCTC CCTATAGAAGGAAGA SH0126 126321 - 126443 + | hypothetical protein TERM 192 126498 - 126463 - T 74 -6.9 -4.31412 | opp_overlap 126465, overlap 126451 126465 AAATATTTATTAAAA TAGGCAGCTAGCAGA TTAAAT TCTACTAGCTGTCTT TTGTATATTTATGAA TERM 193 126496 - 126465 - T 86 -9.5 -3.74902 | opp_overlap 126465, overlap 126463 ATATTTATTAAAATA GGCAGCTAGCAGA TTAAAT TCTACTAGCTGTC TTTTGTATATTTATG TERM 194 126465 - 126496 + T 100 -9.5 -4.76423 | opp_overlap 126465 126463 ATATTTATTAAAATA GGCAGCTAGCAGA TTAAAT TCTACTAGCTGTC TTTTGTATATTTATG SH0127 126726 - 126529 - | hypothetical protein TERM 195 127093 - 127083 - g 84 -5.4 -5.4756 | overlap 127084 AAGGTTAACAAAAAA GTTG TCT CAAC AAATAAAAAACCACA SH0128 126750 - 128120 + | hypothetical protein TERM 196 128194 - 128150 - T 88 -6.7 -5.25805 | gap 3, opp_overlap 128150 AATAAATTTAAAAAA GTGAGCGGG--A-TGACATAAC TAGG GTAATGTCAATATCCCGCTCAC TTTATGTGTAATTGG TERM 197 128150 - 128194 + T 72 -6.7 -4.17417 | gap 3, opp_overlap 128150 AATAAATTTAAAAAA GTGAGCGGG--A-TGACATAAC TAGG GTAATGTCAATATCCCGCTCAC TTTATGTGTAATTGG SH0129 128619 - 128212 - | hypothetical protein SH0130 128950 - 129075 + | hypothetical protein SH0131 129166 - 129243 + | hypothetical protein SH0132 130679 - 129456 - | succinyl-diaminopimelate desuccinylase SH0133 130997 - 132034 + | hypothetical protein TERM 198 132418 - 132396 - f 82 -9.1 -3.86015 | opp_overlap 132396 CACGGGTGTTACAAA CTCGTCCCT CTTGT AGGGACGGG TTTTTTATTTTATAT TERM 199 132396 - 132418 + F 100 -11.3 -5.8901 | opp_overlap 132396 CACGGGTGTTACAAA CTCGTCCCT CTTGT AGGGACGGG TTTTTTATTTTATAT thrS 132457 - 134373 + | threonyl-tRNA synthetase TERM 200 134397 - 134426 + F 100 -11.6 -4.84527 | opp_overlap 134397 134394 CTTTGAATCAACCTA GCCTATCAGAGT ATGAAC ACTTTGATAGGC TTTTTAATGTCTAGA TERM 201 134426 - 134397 - f 78 -10.1 -2.60244 | opp_overlap 134397, overlap 134394 CTTTGAATCAACCTA GCCTATCAGAGTA TGAA CACTTTGATAGGC TTTTTAATGTCTAGA SH0135 134564 - 135385 + | hypothetical protein SH0136 135372 - 136076 + | hypothetical protein SH0137 136128 - 136586 + | hypothetical protein SH0138 136643 - 136957 + | hypothetical protein TERM 202 136968 - 136955 - f 74 -2.5 -5.59564 | ACAAAGCTAAAAAAA TAAAT AATA ATTTA TCTAGAGCATGTTAT TERM 203 137489 - 137511 + G 75 -10 -2.5604 | overlap 137487 137492 ATTCTGTTGTATTTA TGATGTTCCA TGG TGGAACATTA ACTTATTTTATTGTA TERM 204 137492 - 137508 + G 79 -9.5 -3.40066 | overlap 137489 137487 CTGTTGTATTTATGA TGTTCCA TGG TGGAACA TTAACTTATTTTATT TERM 205 137906 - 137917 + G 71 -3 -5.06116 | ATACACTTATTTATG TAAC AATG GTTA TTTTATTATTCTTTT SH0139 137149 - 138216 + | hypothetical protein SH0140 138231 - 140126 + | hypothetical protein TERM 206 140240 - 140279 + T 91 -10.3 -4.25283 | gap 1, opp_overlap 140242, overlap 140242 CTATTGAAACTAAAG AAGCCAGTAAATGAAGTT GTTAA AACT-CATTTACTGGCTA TTTTAATAGGAGGAT TERM 207 140242 - 140277 + T 100 -12.9 -3.73042 | gap 1, opp_overlap 140242, overlap 140240 ATTGAAACTAAAGAA GCCAGTAAATGAAGTT GTTAA AACT-CATTTACTGGC TATTTTAATAGGAGG TERM 208 140277 - 140242 - T 100 -12.9 -4.15998 | gap 1, opp_overlap 140240 140242 ATTGAAACTAAAGAA GCCAGTAAATGAAGTT GTTAA AACT-CATTTACTGGC TATTTTAATAGGAGG TERM 209 140334 - 140349 + T 78 -7.6 -4.33487 | overlap 140331 ATGACTACATTCTAT TCCATG CTGC CATGGA TTGTTTTAATATTAT SH0141 141259 - 140330 - | hypothetical protein SH0142 142092 - 141256 - | hypothetical protein TERM 210 141472 - 141460 - G 77 -6.2 -4.72272 | CTTTGTGATTAAAAA GGCG GTCGA CGCC GGTGTAACAAGTAAT SH0143 142828 - 142085 - | hypothetical protein TERM 211 142852 - 142865 + H 73 -5.3 -4.80453 | opp_overlap 142852 CTCCTAATTAAAAGT TTAGG TTAA CCTAA TTTATTTTATAATAA TERM 212 143067 - 143041 - H 81 -8.2 -4.39318 | opp_overlap 143047 143048, overlap 143048 TAATTAAATGTAAAA TATAAAACGTAA TTA TTACGATTTATA AAAAGAAAGGTATGA TERM 213 143060 - 143048 - H 80 -6.3 -4.90471 | opp_overlap 143047 143048, overlap 143041 ATGTAAAATATAAAA CGTAA TTA TTACG ATTTATAAAAAGAAA TERM 214 143895 - 143910 + G 71 -7.6 -3.58305 | overlap 143875 ATTCGAGACGATTAC CGTTTC ACGC GAAACG TTTCAACGATTGGTT SH0144 143087 - 144286 + | hypothetical protein TERM 215 144341 - 144391 + F 100 -7 -5.60993 | gap 1, opp_overlap 144345, overlap 144343 ACTTAAGATGGCTTT AACACCTTGC-ACATTGCGTTAA AGTAAG TTAACGCTCTGTTGCGAGGTGTC TTTTTTTATAAAAGA TERM 216 144343 - 144389 + F 90 -9.6 -4.45201 | gap 1, opp_overlap 144345, overlap 144341 TTAAGATGGCTTTAA CACCTTGC-ACATTGCGTTAA AGTAAG TTAACGCTCTGTTGCGAGGTG TCTTTTTTTATAAAA SH0145 144512 - 145873 + | hypothetical protein TERM 217 145922 - 145895 - f 83 -9.9 -3.24825 | opp_overlap 145889, overlap 145890 AGTAATAACATGTAA GCCTGGGACAT AAATCA ATGTCTCAGGC TAAAAATATATATTG TERM 218 146205 - 146193 - f 70 -6.3 -4.21908 | opp_overlap 146192 146193 TAGTACTATTTAAAA CGTAA TTA TTACG ATTTAAAACGAGCGA SH0146 146231 - 146923 + | hypothetical protein TERM 219 148313 - 148300 - g 71 -3.1 -5.09225 | opp_overlap 148300 148311 ACTGTATCTAAAAAA GAACA ACAG CGTTC ATTTGATGAAATATT SH0147 146920 - 148473 + | hypothetical protein TERM 220 148956 - 148978 + G 77 -8.5 -3.6279 | overlap 148950 148951 GGAGTACGTTGGCAG TTGCTACCT TTTGT AGGTAGCGA TTCTTGGCAACATTT SH0148 148476 - 149432 + | hypothetical protein TERM 221 149715 - 149705 - gf 79 -5.4 -5.05113 | GGTATAGAAAGAAAA TGGT TAG ACCA AATCATCATGTTTAT TERM 222 149730 - 149750 + GF 80 -9.1 -3.53924 | AAATCATCATGTTTA TTGCCGATA TGC TATTGGCAA TTCCTTCATTTATTA SH0149 149432 - 150199 + | hypothetical protein SH0150 150166 - 150933 + | hypothetical protein SH0151 150926 - 151561 + | hypothetical protein SH0152 151620 - 152792 + | hypothetical protein SH0153 152947 - 153171 + | hypothetical protein TERM 223 153181 - 153217 + F 84 -5.9 -5.34555 | overlap 153184 GATTAATATGAATTA TCGGTCTAGGACAACTA TAA TGGTTGTCTTAGACTTC TTTTTTGTAATATGA TERM 224 153184 - 153214 + F 100 -14.2 -4.74611 | overlap 153181 TAATATGAATTATCG GTCTAGGACAACTA TAA TGGTTGTCTTAGAC TTCTTTTTTGTAATA SH0154 153281 - 154141 + | hypothetical protein SH0155 155575 - 154250 - | hypothetical protein TERM 225 155633 - 155614 - H 90 -10.8 -3.67517 | overlap 155605 TAGTAATAGTCTAAA CTATGGAG TGAA CTCCATAG CAAGTACTAATTTTT SH0156 155718 - 156149 + | hypothetical protein SH0157 156168 - 156599 + | hypothetical protein SH0158 156757 - 157773 + | hypothetical protein SH0159 157900 - 158199 + | hypothetical protein TERM 226 158224 - 158260 + F 100 -14 -5.4659 | gap 2 TCATTTTATTGTCTA GGCGGAATCGCGAATTCA ATT TGAATTCG-G-TTCCGCC TTTTTCTTTATATTC TERM 227 158565 - 158552 - g 73 -3.9 -5.17576 | TACGAAGGCAAAAAA GTAAT AGTG ATTAC GTCGAAGAATGTTGC SH0160 158336 - 158860 + | hypothetical protein SH0161 158948 - 159997 + | hypothetical protein SH0162 160010 - 160672 + | hypothetical protein TERM 228 160684 - 160727 + T 100 -12.6 -3.50734 | gap 1, opp_overlap 160678 160684, overlap 160680 ATAAACAAATTAAAA CTCCCTCCAAGTAAGCTTTGA AAA TCATGGCT-ACTTAGAGGGAG TTAATTATATGACTT TERM 229 160727 - 160684 - T 100 -12.6 -4.74219 | gap 1, opp_overlap 160684 160680, overlap 160678 ATAAACAAATTAAAA CTCCCTCCAAGTAAGCTTTGA AAA TCATGGCT-ACTTAGAGGGAG TTAATTATATGACTT aapA 162180 - 160771 - | D-serine/D-alanine/glycine transporter TERM 230 160817 - 160827 + g 80 -6.8 -4.7153 | TTTTCATCTTCCATA GCGA TTG TCGC TTTTTCAGATTCTTT TERM 231 160980 - 160991 + g 72 -5.8 -4.38313 | opp_overlap 160963 CATATGCCATGTATT TGCC ACCA GGCA TTTTAAATTTACTAT SH0164 162547 - 163170 + | hypothetical protein TERM 232 163263 - 163297 + F 91 -8.1 -5.14563 | gap 2 CACTCATGCGGTGGG GCGGAACAGTGTGTTCA TTA TGAATA--CTGTTCCGC TTTTTTAATAAAGAG SH0165 163504 - 163863 + | hypothetical protein SH0166 164106 - 164642 + | hypothetical protein TERM 233 164866 - 164845 - f 70 -6 -4.26881 | GGGTATAAAATTAAA GACATAAA ATTTTG TTTATGTC AACAACAATTTAAGG SH0167 164893 - 165180 + | hypothetical protein TERM 234 165248 - 165297 + T 100 -17 -2.89797 | gap 2, opp_overlap 165248, overlap 165244 165251 ATATACGAATGAAAA TAAGCACCACCTATTATGAAAAGC GAAT GCTTTT--TAATAGGTGGTGCTTA TCATGTTTATGACGC TERM 235 165297 - 165248 - T 100 -17 -4.48333 | gap 2, opp_overlap 165248 165244 165251 ATATACGAATGAAAA TAAGCACCACCTATTATGAAAAGC GAAT GCTTTT--TAATAGGTGGTGCTTA TCATGTTTATGACGC TERM 236 165251 - 165294 + T 100 -14.3 -3.59024 | gap 2, opp_overlap 165248, overlap 165248 165244 TACGAATGAAAATAA GCACCACCTATTATGAAAAGC GAAT GCTTTT--TAATAGGTGGTGC TTATCATGTTTATGA lip 167661 - 165415 - | hypothetical protein TERM 237 166896 - 166908 + g 70 -4.1 -4.65153 | GTTGTGATTGTGCTT GTTGA TTG TCGAC TTTTGGTTTATCTGA TERM 238 168022 - 167998 - R 100 -13.7 -6.28631 | TAAATCAAAAAAAAA GACTGAAACGA TAA TCGTTCCAGTC GTAAAATAGCGGAGA SH0169 168082 - 167987 - | hypothetical protein SH0170 168359 - 169222 + | hypothetical protein SH0171 169293 - 170639 + | hypothetical protein TERM 239 170667 - 170722 + T 95 -8.6 -4.98917 | gap 1, opp_overlap 170670, overlap 170670 AACGATAACAATGTA TAAGGCACCTCGTTAATTTAGCTTAGT GAT GTTCAA-TAAATTAACGAGGTGCCTAA TTTTATTGTATTTTG TERM 240 170670 - 170719 + T 86 -10.3 -3.32095 | gap 1, opp_overlap 170670, overlap 170667 GATAACAATGTATAA GGCACCTCGTTAATTTAGCTTAGT GAT GTTCAA-TAAATTAACGAGGTGCC TAATTTTATTGTATT TERM 241 170719 - 170670 - T 90 -11.1 -3.48822 | gap 1, opp_overlap 170670 170667 GATAACAATGTATAA GGCACCTCGTTAATTTAGCTTA GTGATGT TCAA-TAAATTAACGAGGTGCC TAATTTTATTGTATT SH0172 170746 - 170699 - | hypothetical protein TERM 242 170805 - 170784 - R 88 -10.3 -3.51232 | opp_overlap 170789 TGCTGGGGAAAGGAA CTTAAGTGT TTAT ACACTTAAG TAAGTAGTTCTAATG SH0173 171782 - 170919 - | hypothetical protein TERM 243 171043 - 171024 - G 71 -8.6 -2.96711 | overlap 171016 TTGATAAGCGATATA GTACGCAT CGAA ACGCGTAC AATTCACCCATACTG TERM 244 172215 - 172205 - g 76 -4 -5.25735 | opp_overlap 172205 CGAAAAAATCAAAAA CAAT TGG ATTG TTGTTACCAGATATG SH0174 172024 - 172992 + | hypothetical protein rbsK 172992 - 173873 + | ribokinase rbsD 173866 - 174255 + | D-ribose pyranase rbsA 174268 - 175764 + | ribose ABC transporter ATP-binding protein rbsC 175745 - 176683 + | ribose ABC transporter permease TERM 245 176799 - 176789 - g 71 -3.2 -5.1286 | GAAAAATGATAAAAA TGGC AAA ACCA ATAAGAAAAAATCAG TERM 246 177402 - 177388 - g 87 -10 -3.93057 | opp_overlap 177381 CTCAAAATGATGAAA TGGCAC TTG GTGCCA TTGAAGCTATTGGGG TERM 247 177597 - 177583 - g 77 -5.8 -4.78326 | CTGTAAATAAACAAA TTAAAG TGC CTTTAA AATTAAAAAAAAGTA rbsC 176703 - 177620 + | ribose ABC transporter (ribose-binding protein) SH0180 178512 - 177664 - | 2-dehydropantoate 2-reductase TERM 248 178836 - 178826 - g 77 -5.4 -4.84673 | TGAAACAAGACAAAA CGAA AAT TTCG ATGATTACAGCATAT panB 178783 - 179601 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase panC 179594 - 180445 + | pantoate--beta-alanine ligase panD 180452 - 180835 + | aspartate alpha-decarboxylase TERM 249 180876 - 180899 + F 100 -11.8 -4.9792 | GTAAAATTGATTTGA TCCGGTAGCT TAAA AGCTATCGGA TTTTTGTGTGGGCTA SH0184 181009 - 181047 + | hypothetical protein SH0185 181048 - 181911 + | hypothetical protein TERM 250 181954 - 181922 - T 100 -10.6 -5.03405 | opp_overlap 181921 181919 181922 AATAGTATATAAAAA CGCTCAGAATGCAA TAAAT TAGCTTTCTGAGCG ATCTTTATATCTAAC TERM 251 181922 - 181954 + T 83 -10.6 -2.79116 | opp_overlap 181922, overlap 181921 181919 AATAGTATATAAAAA CGCTCAGAATGCAA TAAAT TAGCTTTCTGAGCG ATCTTTATATCTAAC SH0186 182617 - 181940 - | hypothetical protein SH0187 182806 - 183657 + | hypothetical protein SH0188 183671 - 183973 + | hypothetical protein SH0189 183998 - 185293 + | hypothetical protein SH0190 185309 - 185626 + | hypothetical protein SH0191 185633 - 185920 + | hypothetical protein SH0192 185921 - 187009 + | hypothetical protein SH0193 187023 - 188027 + | hypothetical protein TERM 252 188033 - 188058 + F 76 -4 -5.40072 | ATTATATTAAAAAGA GTGCTCCA AAAATTATAA TGGGGCAC TTTTTTTGCAAGAAA TERM 253 188598 - 188582 - g 70 -8.1 -3.1876 | AATCGGAGTTAGTAA CGATAAA ATC TTTATCG GACGCATGCAATCTG SH0194 188169 - 189035 + | hypothetical protein TERM 254 189051 - 189081 + F 100 -10.6 -4.90296 | opp_overlap 189051 TAAGTTCAAACCCAA GTTCTCAGGTTAAT TAA ATTAGACTGAGAAC TTTTTATAGGGTTTT TERM 255 189081 - 189051 - f 74 -8.4 -3.29211 | opp_overlap 189051 TAAGTTCAAACCCAA GTTCTCAGGTTAAT TAA ATTAGACTGAGAAC TTTTTATAGGGTTTT SH0195 189171 - 189722 + | hypothetical protein TERM 256 189763 - 189799 + T 80 -5.4 -5.27206 | gap 2, opp_overlap 189759 189763 AGCAACATAAATTAA GGTTCAACGTGCAGTTAA TGA TTAAC--CACATTGAACC TTTTTATTATGTCTA TERM 257 189799 - 189763 - T 71 -7.6 -3.69943 | gap 2, opp_overlap 189763, overlap 189759 AGCAACATAAATTAA GGTTCAACGTGCAGTTAA TGA TTAAC--CACATTGAACC TTTTTATTATGTCTA SH0196 190993 - 189812 - | hypothetical protein mutS 192766 - 191159 - | DNA mismatch repair protein MutS SH0198 193063 - 193467 + | hypothetical protein TERM 258 193480 - 193514 + F 100 -7.3 -5.68438 | opp_overlap 193480 TGAATCTCGCGAAAA TAGGATCTCAAACAT TTTAT ATGTATGAGGTTCTA TTTTTTATTTAATAA arsB 193685 - 194977 + | arsenic efflux pump protein SH0200 195638 - 197032 + | hypothetical protein TERM 259 197182 - 197139 - g 100 -15.5 -3.79113 | opp_overlap 197132 197139 197145 197175, overlap 197145 ACGCTGTCATAACAA TGTAAAGGGCGGGTTTCTA AATAAA TAGGAACCCGCCCTTTAAA TGCTTGAATTTATCA TERM 260 197139 - 197182 + G 100 -17.7 -2.83346 | opp_overlap 197139 197145, overlap 197132 197145 197175 ACGCTGTCATAACAA TGTAAAGGGCGGGTTTCTA AATAAA TAGGAACCCGCCCTTTAAA TGCTTGAATTTATCA SH0201 197059 - 197166 + | hypothetical protein TERM 261 197145 - 197176 + F 100 -16.7 -3.71794 | opp_overlap 197139 197145, overlap 197139 197132 197175 TCATAACAATGTAAA GGGCGGGTTTCTA AATAAA TAGGAACCCGCCC TTTAAATGCTTGAAT TERM 262 197176 - 197145 - f 100 -14.5 -3.87576 | opp_overlap 197145 197139 197132 197175, overlap 197139 TCATAACAATGTAAA GGGCGGGTTTCTA AATAAA TAGGAACCCGCCC TTTAAATGCTTGAAT TERM 263 197508 - 197532 + G 73 -3.7 -5.07971 | TAAAGCCATAAATAT TACAATGTTAA TTT TAAATATTGTA TTTTTAGTTATTTTC SH0202 197332 - 197571 + | hypothetical protein TERM 264 197639 - 197680 + F 95 -11.1 -4.44448 | opp_overlap 197640 197642, overlap 197642 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 265 197679 - 197640 - f 100 -12.4 -4.07562 | opp_overlap 197639 197642, overlap 197642 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 266 197642 - 197677 + F 100 -17.2 -4.33281 | opp_overlap 197640 197642, overlap 197639 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 267 197677 - 197642 - f 100 -15 -3.62348 | opp_overlap 197642 197639, overlap 197640 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0203 197650 - 197799 + | hypothetical protein TERM 268 198015 - 197999 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 269 198769 - 198783 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 270 199479 - 199511 + G 93 -8 -5.55698 | opp_overlap 199479 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 271 199511 - 199479 - g 90 -8 -5.35222 | opp_overlap 199479 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 197883 - 199583 + | IS1272 transposase SH0205 199619 - 200146 + | metal-dependent hydrolase SH0206 200281 - 200442 + | hypothetical protein SH0207 200635 - 201315 + | hypothetical protein TERM 272 201342 - 201384 + F 83 -6.6 -4.86621 | gap 1, opp_overlap 201344, overlap 201344 TAATACATTTAAGCA AACACCTTTATCTTC-ATT GTTGTA AATAGAAGGTAAAGGTGTC TTTTTACTTACAAAT TERM 273 201382 - 201344 - f 72 -7 -3.95148 | gap 1, opp_overlap 201342 201344 ATACATTTAAGCAAA CACCTTTATCTTC-ATT GTTGTA AATAGAAGGTAAAGGTG TCTTTTTACTTACAA TERM 274 201344 - 201382 + F 84 -9.2 -4.05402 | gap 1, opp_overlap 201344, overlap 201342 ATACATTTAAGCAAA CACCTTTATCTTC-ATT GTTGTA AATAGAAGGTAAAGGTG TCTTTTTACTTACAA TERM 275 201403 - 201414 + F 85 -3 -6.01369 | opp_overlap 201403 TTACTTACAAATTTA GAAA ACGC TTTC TTTTTTTCTTGTTTC TERM 276 202542 - 202528 - g 85 -8.6 -4.1043 | GTTAAATACGATAAA GGTGAA TTG TTCACC AAATTATTTGAACGT SH0208 201496 - 203106 + | hypothetical protein TERM 277 203422 - 203432 + G 77 -5.4 -4.946 | overlap 203412 TTATTTGGATGATCT TCCA TGT TGGA TTTTTAGTCTTTGGT rbtT 203139 - 204419 + | hypothetical protein SH0210 204434 - 205216 + | hypothetical protein TERM 278 205306 - 205347 + F 100 -10.3 -5.47159 | opp_overlap 205306 AATAATTTGATGATA TGCATCTCAACTGTAGGAT GAAA ATCCAATGTTTGAGATGCA TTTTTTATATTCAAA TERM 279 205377 - 205363 - f 71 -7.2 -3.70902 | opp_overlap 205357 TTTTTTATATTCAAA TCAAGA ATT TCTTGA ATGAAGTTATGCGTG SH0211 205446 - 207149 + | hypothetical protein TERM 280 207204 - 207155 - T 73 -5.5 -4.64486 | gap 3, opp_overlap 207160 207170, overlap 207152 207160 AGTAAAATAAAATAA CAAAAGCACATTGC--A-CTTGAT AGTTA ATCAAGCTTTGCAATGTGCTTTTA ATTCGTTAAGAAAAA SH0212 207600 - 207202 - | hypothetical protein TERM 281 207704 - 207740 + r 70 -6.9 -3.9279 | TAAAAAGTGGTGGGA TATACATTTTGAAAATA CTT TATTTTAGAAGTGTATA TTTATGAAATTCACT SH0213 209409 - 207751 - | putative FAD-binding dehydrogenase TERM 282 209434 - 209448 + H 70 -5.8 -4.4009 | TCATATTAATTGTTA TATGTA GTC TACATA TTTTATCAAGTAAAG SH0214 209570 - 210952 + | hypothetical protein TERM 283 210962 - 210987 + F 100 -10.5 -5.24129 | overlap 210964 ATGTAGTAGATGATG TGCGCTTCTCT TTTT AGGGAAGCGTA TTTTTTATCGAAAAA TERM 284 210964 - 210985 + F 95 -10.9 -4.25873 | overlap 210962 GTAGTAGATGATGTG CGCTTCTCT TTTT AGGGAAGCG TATTTTTTATCGAAA gutB 211123 - 212196 + | hypothetical protein TERM 285 212254 - 212285 + F 81 -7.4 -4.70534 | gap 1 ATATGTATTACCCCA TAGCCTCC-TACCAT TTA AAGGTATGGAGGTTA TTTTATGTCTGTTTA SH0216 212376 - 212816 + | hypothetical protein SH0217 212832 - 214175 + | hypothetical protein TERM 286 214246 - 214195 - T 83 -7.6 -4.66625 | gap 1, opp_overlap 214195 ATATAGATAAATAAA GATGCCTACAT-ATTGGAATCAA AGCATTA TTGTTCCAAATCATGTAGGCATC TTTGTAAATTTTACT TERM 287 214195 - 214246 + T 72 -7.1 -4.06781 | gap 3, opp_overlap 214195 ATATAGATAAATAAA GATGCCTACAT-A-TTGGAATCAA AGCATTA TTG-TTCCAAATCATGTAGGCATC TTTGTAAATTTTACT SH0218 214967 - 214281 - | hypothetical protein SH0219 215154 - 215666 + | hypothetical protein SH0220 215700 - 215795 + | hypothetical protein SH0221 215949 - 217016 + | hypothetical protein SH0222 217031 - 217438 + | hypothetical protein TERM 288 217445 - 217467 + F 100 -9.2 -5.96894 | opp_overlap 217444 217445, overlap 217446 CAACCGTAATACAAC TCTCTAGCCA ACT TGGTTAGAGG TTTTTTTATTTGAGT TERM 289 217446 - 217466 + F 91 -10.5 -4.15696 | opp_overlap 217444 217445, overlap 217445 AACCGTAATACAACT CTCTAGCCA ACT TGGTTAGAG GTTTTTTTATTTGAG SH0223 217713 - 219065 + | hypothetical protein SH0224 219104 - 220051 + | hypothetical protein SH0225 220067 - 221107 + | branched-chain alpha-keto acid dehydrogenase, E1 component beta subunit SH0226 221126 - 222424 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 290 222450 - 222481 + F 81 -8 -4.3534 | ATTTAATTTGATTAA GGCCCTCAGTAC ACTAAACA GTGCTGGGGGTC TTTTCATGCTTCAAA SH0227 222705 - 224066 + | hypothetical protein TERM 291 224360 - 224345 - f 74 -6.2 -4.58395 | opp_overlap 224357 CTCATTCGTTAAAAA TACACA GTAT TGTGTA AACTACATACATTAA TERM 292 224484 - 224457 - f 72 -6.6 -4.09864 | gap 1, opp_overlap 224461, overlap 224459 224461 ACTTATTTTTTAAAA TACACTATCTTAT ATT ATAAGATAGT-TA ATAAAAGGTGATGAC TERM 293 224481 - 224461 - f 85 -9.9 -3.40175 | opp_overlap 224461, overlap 224459 224457 ATTTTTTAAAATACA CTATCTTAT ATT ATAAGATAG TTAATAAAAGGTGAT TERM 294 224461 - 224481 + F 83 -9.9 -3.1505 | opp_overlap 224461 224459 224457 ATTTTTTAAAATACA CTATCTTAT ATT ATAAGATAG TTAATAAAAGGTGAT SH0228 224500 - 224838 + | hypothetical protein SH0229 224879 - 225607 + | hypothetical protein TERM 295 225655 - 225622 - T 88 -7.5 -4.89339 | opp_overlap 225622 225617 AATGATTGATAAAAA GCGTTGGATCACT TCATTAAT AGTGACTCAACGC TTTTATTACTGACAT TERM 296 225622 - 225655 + T 83 -7.5 -4.71828 | opp_overlap 225622, overlap 225617 AATGATTGATAAAAA GCGTTGGATCACT TCATTAAT AGTGACTCAACGC TTTTATTACTGACAT SH0230 226401 - 225694 - | hypothetical protein TERM 297 226762 - 226711 - R 72 -4.8 -4.91873 | gap 3, opp_overlap 226711 226746 TATATTAATTAAAAA GCGTTGAATCATGATCTACTTGACT AAAAA AGCCT-GTAGA--ATGATTCAACGC TTTTATTATTTGTAT SH0231 228636 - 226768 - | hypothetical protein TERM 298 227007 - 227020 + g 76 -3.9 -5.37171 | opp_overlap 227016, overlap 227016 CTTTATAGTGAGCTA GTTTA TCAA TAAAC TTTTTATTTCCTATT TERM 299 228590 - 228568 - G 72 -2.9 -5.28176 | gap 1, opp_overlap 228568 TTCAGGTATAAAAAA TGGTTGTTTA CTAT TAAA-AACCA ATTCTGAAATGTTTT TERM 300 228887 - 228900 + r 72 -6.7 -4.18094 | opp_overlap 228886 228887 ACCATGTTTTAGAAG GCCTT GAAA AAGGC TTTTAACGTGATTTA mtlD 230049 - 228946 - | mannitol-1-phosphate 5-dehydrogenase mtlA 230483 - 230049 - | PTS system, mannitol specific IIA component SH0234 232531 - 230495 - | hypothetical protein TERM 301 231706 - 231724 + g 71 -7.5 -3.65828 | GGTTAAAGTCGATGT CGTATAG TGTCT CTATACG TTTCGCAATTTCTGT mtlF 234163 - 232604 - | PTS system, mannitol specific IIBC component TERM 302 234255 - 234241 - H 82 -6.4 -5.11389 | ACAACACAAAGAAAA TGCGAC TTT GTCACA GTAATTGTGACAACG SH0236 234499 - 234627 + | hypothetical protein TERM 303 234736 - 234763 + F 100 -10.6 -5.68438 | opp_overlap 234739 234740 234742 TCAATATTTATGTCA GAATCAGCGACT TTCT AGGCGCTGGTTC TTTTTTGTTTGGTAA rarD 234961 - 235866 + | hypothetical protein TERM 304 235928 - 235976 + T 73 -9.2 -2.70932 | overlap 235936 235974 CAAATTCGCAGTAGC TGACT-GAACTGAGAAGGCGCCTA AAT TAAGC-TTTTCTCAGTTCTAGTCA TCCTTGCGGGCGGGG TERM 305 236040 - 236081 + T 86 -6.2 -5.28176 | gap 3, opp_overlap 236056, overlap 236053 CAAGCAAAGCAAGCT GGGAG-TGGACGACGAATTCA ATA TGAATTC-T-GTTCAGCTCCC TTTTTTCTGAATAAA TERM 306 236053 - 236069 + T 70 -8.1 -3.07236 | opp_overlap 236056, overlap 236040 CTGGGAGTGGACGAC GAATTCA ATA TGAATTC TGTTCAGCTCCCTTT SH0238 236342 - 236154 - | hypothetical protein TERM 307 237800 - 237779 - g 73 -3.7 -5.11836 | ACACGTAAAATAAAA GCCGTTAAA GTAT TTTTACAGC ACGGGGTTTTAGGTA TERM 308 238648 - 238637 - g 82 -3 -5.65678 | AGAAAAGATAAAAAA TACT TTAA AGTA ATGGAAAAATTTAAC TERM 309 239159 - 239136 - g 88 -7.6 -4.86385 | gap 1, opp_overlap 239135 ATTTCCAAAAAGAAA TTCTTGAGGTA GGT TACC-CAAGAA ATGATGTTTTTTATA SH0239 236588 - 239794 + | hypothetical protein SH0240 240080 - 240685 + | hypothetical protein TERM 310 240775 - 240801 + F 100 -8.9 -5.49568 | AATTGAATAGTTGAT GAGATTTTTAC TTAGT GTAGAAATCTC TTTTTCTTTTGAATT TERM 311 241854 - 241843 - g 74 -3 -5.30155 | opp_overlap 241843 TTATCAAGGAAAAAA TCAT TTAG ATGA TTTATTACAAAGAGC SH0241 240914 - 242644 + | hypothetical protein SH0242 242637 - 242975 + | hypothetical protein TERM 312 243054 - 243000 - f 73 -7.5 -3.78902 | gap 1, opp_overlap 243004, overlap 243004 TAATCAATATTGAAA TTAATACCCTTGTAAG-ATAAAAGTC GATA AACTTTTATACTTGCAAGGGTATTTT CTCAATTATGATTAC TERM 313 243050 - 243004 - f 100 -12.7 -3.56937 | gap 1, opp_overlap 243004, overlap 243000 CAATATTGAAATTAA TACCCTTGTAAG-ATAAAAGTC GATA AACTTTTATACTTGCAAGGGTA TTTTCTCAATTATGA TERM 314 243004 - 243050 + F 100 -14.2 -4.49337 | gap 1, opp_overlap 243004 243000 CAATATTGAAATTAA TACCCTTGTAAG-ATAAAAGT CGATAA ACTTTTATACTTGCAAGGGTA TTTTCTCAATTATGA SH0243 243313 - 245082 + | hypothetical protein TERM 315 245264 - 245240 - g 74 -3 -5.28683 | ATTAATATGAAAAAA GATTTATTAA ATGAA TTAAGAAATC GAAGATTAAATAACA SH0244 245075 - 246715 + | hypothetical protein TERM 316 246765 - 246810 + F 100 -11.3 -5.28176 | ATAATCCATAAATAT TCCTCTTGTAAGATGGTGGTG TATA CACTTTTATCTTACAGGGGGA TTTTTTATGGATAAG TERM 317 247990 - 247975 - g 71 -7.6 -3.61356 | ATTATTGATGTGAAA CATCCT GGAA AGGATG GCGCAATTAATTTAG TERM 318 248524 - 248512 - g 71 -7.7 -3.59262 | GTCGATATCGTGAAA GGACA AAT TGTCC AAGTGAAAGGGTTGC SH0245 246817 - 250020 + | hypothetical protein TERM 319 250066 - 250029 - T 70 -5.7 -4.30477 | opp_overlap 250030 250033, overlap 250030 250033 GAAATAATATATAAA TTAAGAGCACGCTAA TCTGAAAT TTAGTGTGCTCTTAT CATTATTATTTAGAG TERM 320 250065 - 250030 - T 78 -9.2 -3.16659 | opp_overlap 250030 250033, overlap 250029 250033 AAATAATATATAAAT TAAGAGCACGCTAA TCTGAAAT TTAGTGTGCTCTTA TCATTATTATTTAGA TERM 321 250030 - 250065 + T 91 -11.4 -3.07355 | opp_overlap 250030 250029 250033, overlap 250033 AAATAATATATAAAT TAAGAGCACGCTAA TCTGAAAT TTAGTGTGCTCTTA TCATTATTATTTAGA TERM 322 250033 - 250062 + T 76 -8.7 -3.65786 | opp_overlap 250033 250030 250029, overlap 250030 TAATATATAAATTAA GAGCACGCTAA TCTGAAAT TTAGTGTGCTC TTATCATTATTATTT SH0246 250983 - 250072 - | hypothetical protein TERM 323 250511 - 250521 + g 71 -6.8 -4.15841 | TCAAATATAAGTGTG GCAG CAT CTGC TTTATCATTTAATAG SH0247 251323 - 251661 + | hypothetical protein SH0248 251699 - 252535 + | hypothetical protein TERM 324 252528 - 252544 + F 100 -9.5 -5.80364 | AGAGAATTAATTTGA GAGACTA ATT TAGTCTC TTTTTTTATTGACCT SH0249 252612 - 253022 + | hypothetical protein TERM 325 253296 - 253307 + G 74 -5.8 -4.54727 | TGATATGACATTTTG GCCT AATG AGGC TTTTAGTTTCAAAAA SH0250 253015 - 253569 + | hypothetical protein TERM 326 253610 - 253575 - f 78 -7.1 -4.63044 | gap 1, opp_overlap 253579, overlap 253579 ATCCATATAAATAAA CTAA-GCACAAAGC AGTTATTAA GCTTTGTGCTTTAG TATGTTAGCCTTAAA TERM 327 253579 - 253605 + F 78 -8.1 -3.93262 | opp_overlap 253575 253579 ATATAAATAAACTAA GCACAAAGC AGTTATTAA GCTTTGTGC TTTAGTATGTTAGCC TERM 328 253605 - 253579 - f 76 -8.1 -3.80068 | opp_overlap 253579, overlap 253575 ATATAAATAAACTAA GCACAAAGC AGTTATTAA GCTTTGTGC TTTAGTATGTTAGCC SH0251 253666 - 253782 + | hypothetical protein SH0252 253924 - 254121 + | hypothetical protein SH0253 254317 - 254508 + | hypothetical protein SH0254 254538 - 255101 + | hypothetical protein SH0255 255133 - 255393 + | hypothetical protein SH0256 255546 - 255950 + | hypothetical protein TERM 329 255964 - 256010 + F 76 -7.4 -4.42386 | opp_overlap 255979, overlap 255967 AAGACATAATATGGA GTAGGGAGTGAGACAGAATTTA ACT TGAATTCAGTTTCATTCCCTTG TTTTATACATAGCAA TERM 330 255967 - 256007 + F 100 -13.5 -4.33182 | opp_overlap 255979, overlap 255964 ACATAATATGGAGTA GGGAGTGAGACAGAATTTA ACT TGAATTCAGTTTCATTCCC TTGTTTTATACATAG TERM 331 256058 - 256028 - f 72 -6.3 -4.41353 | opp_overlap 256028, overlap 256022 TTATACATAGCAAAA GCACTTATAGC ATTGGGAGA ACTATAAGTGC TTTAACGGCCATATT SH0257 256645 - 257676 + | hypothetical protein TERM 332 257717 - 257689 - f 100 -13.3 -4.73614 | opp_overlap 257689 TAGCACTAAAATAAA CCTTCTTTGTATC GTC GTTACAAAGAAGG TTTTTTGGTATATAA TERM 333 257689 - 257717 + F 100 -13.3 -5.24989 | opp_overlap 257689 TAGCACTAAAATAAA CCTTCTTTGTATC GTC GTTACAAAGAAGG TTTTTTGGTATATAA argF 257982 - 258980 + | ornithine carbamoyltransferase TERM 334 259202 - 259190 - g 78 -7.7 -4.14739 | TTATGCAGCTGAAAA TGGTC AAG GACCA GCGTTCCCATTCCCA SH0259 258999 - 259928 + | carbamate kinase TERM 335 259995 - 260034 + T 95 -8 -5.55664 | gap 1 AATAAATAAGTTGAA CCTGGGCTTAATGTAAGTG ATT TACATACGT-AAGCTCAGG TTTTTTTAGTGGTCG TERM 336 260092 - 260066 - T 91 -8 -5.14563 | opp_overlap 260064 TTGGGTATCAAAAAA CCCCTCACTA GTTGGCG TGGTGAGGGG ACTGGTGTTTACTAA SH0260 260414 - 260199 - | hypothetical protein SH0261 260592 - 260437 - | hypothetical protein SH0262 260978 - 260637 - | hypothetical protein TERM 337 260836 - 260816 - G 73 -8.5 -3.29995 | opp_overlap 260815, overlap 260801 260815 CTAAACCTACAAAAG TTTTAGAAA ATA TTTCTAAAA ACATTGTGCGTTGTC TERM 338 261117 - 261089 - R 100 -7.6 -5.82172 | ATGAATATAAAAAAA CCTATGATTG TAAAATAGT CAATCATAGG CTTGAAATGAATTCT SH0263 262192 - 261170 - | hypothetical protein SH0264 263118 - 262204 - | hypothetical protein SH0265 263899 - 263102 - | hypothetical protein TERM 339 263430 - 263446 + g 77 -8.7 -3.53761 | opp_overlap 263430 GCTGGTAAATTATAA GCAGAGG TAA CCTTTGC TTTACCAACACCTTC SH0266 264241 - 263900 - | hypothetical protein SH0267 265264 - 264263 - | hypothetical protein TERM 340 264537 - 264509 - G 77 -8.9 -3.57561 | opp_overlap 264502 GTCGAACTCGGCAAA TTGACGTTTGCCT AGT AGCCACACGTCAA GTGCGTGTAGTAAGT SH0268 265505 - 266698 + | hypothetical protein TERM 341 267085 - 267065 - g 71 -7.7 -3.5882 | TATATCATTCGGAAA CACTTTTTC GGG AAAAAAGTG AAACTCAATATGATA TERM 342 267187 - 267173 - g 87 -6.4 -5.43974 | AAAATGAAAGAAAAA CAACGC TAT GCGTTA GTTGAACCTGACAAA bioB 266936 - 267901 + | biotin synthase SH0270 268526 - 268005 - | hypothetical protein SH0271 268719 - 268552 - | hypothetical protein TERM 343 268875 - 268904 + r 100 -13 -3.32914 | opp_overlap 268875 ATAAAGAACAAAAAA GGAGGGAAACAG AATTCA CTGTTTCTCTCC TTAATATAATTACAT TERM 344 268904 - 268875 - R 100 -10.8 -5.74288 | opp_overlap 268875 ATAAAGAACAAAAAA GGAGGGAAACAG AATTCA CTGTTTCTCTCC TTAATATAATTACAT SH0272 270332 - 268914 - | hypothetical protein SH0273 270524 - 271723 + | hypothetical protein TERM 345 271738 - 271776 + T 88 -9.1 -4.57341 | gap 2, opp_overlap 271738 ATATAAATACATAAA GGGAGATATCTCAGCATAA TTT TTA-GCTGCG-TATCTCCC TTTTTCAAAAAAATT TERM 346 271776 - 271738 - T 86 -9.1 -4.3207 | gap 2, opp_overlap 271738 ATATAAATACATAAA GGGAGATATCTCAGCATAA TTT TTA-GCTGCG-TATCTCCC TTTTTCAAAAAAATT SH0274 272575 - 271790 - | hypothetical protein SH0275 274472 - 272850 - | hypothetical protein TERM 347 274072 - 274054 - G 77 -9.6 -3.04468 | opp_overlap 274050, overlap 274053 CCCCAATGAAAGAAG GTATAGCC CAT GGCTACAC GTGCTGATTCGGCTG SH0276 274691 - 275848 + | hypothetical protein SH0277 275978 - 276226 + | hypothetical protein TERM 348 276237 - 276269 + T 100 -14.3 -5.56263 | opp_overlap 276237 CATAAAATGAAAAAA CAGAAAGCGGATTGG TTA TCAATCCACTTTCTG TTTTTGTTTTATGCT TERM 349 276269 - 276237 - T 100 -15.8 -5.50313 | opp_overlap 276237 CATAAAATGAAAAAA CAGAAAGCGGATTG GTTAT CAATCCACTTTCTG TTTTTGTTTTATGCT SH0278 277023 - 276295 - | hypothetical protein SH0279 277719 - 277048 - | N-acetylmannosamine-6-phosphate 2-epimerase SH0280 277892 - 278698 + | hypothetical protein SH0281 279623 - 278757 - | hypothetical protein nanA 279866 - 280747 + | N-acetylneuraminate lyase SH0283 280799 - 282331 + | hypothetical protein TERM 350 282340 - 282373 + F 100 -13.3 -4.64844 | AAAATAATATTTTGT TGCGAGTTGAACACA AGTT TTTGTTCGACTCGCA TTTTATGTCTCTAGA SH0284 282436 - 283254 + | hypothetical protein TERM 351 283612 - 283598 - g 100 -7.2 -5.77677 | TAAAACAACAAAAAA TCAGAA GAT TTCTGA GAGTACGATAAAAAA SH0285 283419 - 284027 + | hypothetical protein TERM 352 284064 - 284031 - T 100 -9.7 -5.38054 | opp_overlap 284034, overlap 284034 TTTGATAAATAAAAA TAAGCAGGACTTC GACGGAAT GAAGTCCTGCTTT TACTGTGTAAATAAT TERM 353 284061 - 284034 - T 100 -11.4 -4.76311 | opp_overlap 284034, overlap 284031 GATAAATAAAAATAA GCAGGACTTC GACGGAAT GAAGTCCTGC TTTTACTGTGTAAAT TERM 354 284034 - 284061 + T 100 -12.1 -4.39568 | opp_overlap 284031 284034 GATAAATAAAAATAA GCAGGACTTCG ACGGAA TGAAGTCCTGC TTTTACTGTGTAAAT SH0286 284976 - 284158 - | hypothetical protein SH0287 285132 - 285794 + | hypothetical protein TERM 355 285858 - 285831 - T 71 -4.2 -5.12068 | opp_overlap 285832, overlap 285832 TATACGCAATAAAAA GCAATGCCTA AGTTTTGA TAGGCATTGT TTTTTAACTTAAATA TERM 356 285857 - 285832 - T 71 -7.7 -3.66156 | opp_overlap 285832, overlap 285831 ATACGCAATAAAAAG CAATGCCTA AGTTTTGA TAGGCATTG TTTTTTAACTTAAAT TERM 357 285832 - 285857 + T 89 -7.7 -5.16572 | opp_overlap 285832 285831 ATACGCAATAAAAAG CAATGCCTA AGTTTTGA TAGGCATTG TTTTTTAACTTAAAT SH0288 286499 - 285867 - | hypothetical protein SH0289 287259 - 286486 - | hypothetical protein SH0290 287993 - 287226 - | hypothetical protein SH0291 288942 - 287983 - | hypothetical protein SH0292 290448 - 289024 - | hypothetical protein TERM 358 290617 - 290644 + r 78 -10 -2.61255 | opp_overlap 290623, overlap 290623 CCAATTTTGAAAATA AAAAAAGAGGGT GGGG ACCCTCTTTTTA ATGTGTTTCTCCTAG TERM 359 290623 - 290638 + r 95 -9 -4.90217 | opp_overlap 290623, overlap 290617 TTGAAAATAAAAAAA GAGGGT GGGG ACCCTC TTTTTAATGTGTTTC TERM 360 290638 - 290623 - R 100 -9 -6.09196 | opp_overlap 290623 290617 TTGAAAATAAAAAAA GAGGGT GGGG ACCCTC TTTTTAATGTGTTTC pcp 291280 - 290642 - | pyrrolidone-carboxylate peptidase SH0294 292231 - 291305 - | hypothetical protein SH0295 292928 - 292224 - | hypothetical protein TERM 361 293764 - 293778 + G 74 -2.2 -5.42164 | TTATTTCTAGCTTTT TAAGTT GGC AATTTA TTTTTGTTATTTCTA SH0296 293280 - 294656 + | hypothetical protein TERM 362 294692 - 294663 - T 91 -7.9 -5.25772 | opp_overlap 294663 AAAGCATAATAAAAA CAAGCGTGGCT TTTTAATC AGTCACGCTTG TTTGTTTATATATAA TERM 363 294663 - 294692 + T 100 -10.1 -4.65722 | opp_overlap 294663 AAAGCATAATAAAAA CAAGCGTGGCT TTTTAATC AGTCACGCTTG TTTGTTTATATATAA SH0297 295682 - 294708 - | hypothetical protein SH0298 296937 - 295735 - | hypothetical protein TERM 364 297001 - 297036 + r 95 -12.1 -2.974 | opp_overlap 297001, overlap 296998 296991 297003 GGTAGTCATAAAAAA TATCCCTTATGAGCT AATTAA ATCTCATAAGGGATA TGATTTAGATATTAA TERM 365 297036 - 297001 - R 100 -12.1 -5.28176 | opp_overlap 296998 296991 297001 297003 GGTAGTCATAAAAAA TATCCCTTATGAGCT AATTAA ATCTCATAAGGGATA TGATTTAGATATTAA TERM 366 297003 - 297034 + r 84 -10.3 -3.03439 | opp_overlap 297001, overlap 297001 296998 296991 TAGTCATAAAAAATA TCCCTTATGAGCT AATTAA ATCTCATAAGGGA TATGATTTAGATATT SH0299 298010 - 297048 - | hypothetical protein drp35 298287 - 299264 + | hypothetical protein TERM 367 299306 - 299331 + F 75 -7.6 -3.92592 | opp_overlap 299306 TAACACACCATAAAA CCCCTCACTA GCGCAA TAGTGAGAGG TTTGGTGTTGCCAAT TERM 368 299331 - 299306 - f 93 -9.8 -4.5477 | opp_overlap 299306 TAACACACCATAAAA CCCCTCACTA GCGCAA TAGTGAGAGG TTTGGTGTTGCCAAT TERM 369 300504 - 300516 + G 76 -7.7 -3.98378 | opp_overlap 300496, overlap 300515 GAATACACGAATGTG CCGAA TCA TTCGG TTGTTATTCAATCTA SH0301 299523 - 301169 + | hypothetical protein TERM 370 301256 - 301303 + F 75 -8.6 -3.49562 | opp_overlap 301256 301261, overlap 301261 AATTAAAGAATAATA TAAAACAGCTTATAGTACACAT CACA AAGTGCACCATAAGCTGTTTTC TTAATTAATATTTTC TERM 371 301303 - 301256 - f 100 -13 -3.65974 | opp_overlap 301256 301261, overlap 301261 AATTAAAGAATAATA TAAAACAGCTTATAGTACACAT CACA AAGTGCACCATAAGCTGTTTTC TTAATTAATATTTTC TERM 372 301298 - 301261 - f 100 -12.9 -4.83518 | opp_overlap 301261 301256, overlap 301256 AAGAATAATATAAAA CAGCTTATAGTACACAT CACA AAGTGCACCATAAGCTG TTTTCTTAATTAATA TERM 373 301261 - 301298 + F 90 -8.5 -4.80178 | opp_overlap 301256 301261, overlap 301256 AAGAATAATATAAAA CAGCTTATAGTACACAT CACA AAGTGCACCATAAGCTG TTTTCTTAATTAATA SH0302 301574 - 302713 + | hypothetical protein TERM 374 302718 - 302760 + F 78 -5.8 -4.8622 | gap 1, overlap 302723 GTTATAAATAATTAG TCGAA-CTCTGAGAATTGC ATTATG GTAGTTCTCAGAGTTTCAA TTTTTCATTAAAAGC TERM 375 302723 - 302754 + F 91 -10.3 -4.02315 | overlap 302718 AAATAATTAGTCGAA CTCTGAGAATTGC ATTATG GTAGTTCTCAGAG TTTCAATTTTTCATT SH0303 302927 - 304078 + | hypothetical protein TERM 376 304103 - 304129 + T 79 -6.6 -4.63527 | opp_overlap 304103 304105, overlap 304105 TTAAATTAGAAAAAA TGTCGCTAAGTT TTC ATCTTGGCGATA TTTTTCAAATAATGA TERM 377 304129 - 304103 - T 70 -2.2 -5.42265 | opp_overlap 304103 304105, overlap 304105 TTAAATTAGAAAAAA TGTCGCTAAGTT TTC ATCTTGGCGATA TTTTTCAAATAATGA TERM 378 304105 - 304127 + T 72 -7 -3.93148 | opp_overlap 304105 304103, overlap 304103 AAATTAGAAAAAATG TCGCTAAGTT TTC ATCTTGGCGA TATTTTTCAAATAAT SH0304 304752 - 304165 - | hypothetical protein TERM 379 305209 - 305192 - g 71 -8.5 -3.05343 | opp_overlap 305204, overlap 305204 GTGAGAGGTGGAAGA GAAATGG AGAA CCATTTC GAATGTTTGTGGGAT SH0305 304949 - 306724 + | hypothetical protein TERM 380 306742 - 306768 + T 77 -9.5 -2.93149 | opp_overlap 306741 306738, overlap 306741 306739 GTAGATAAAATTCAC CCCCACATG ACGAATTAG CATGTGGGG ATATTTGTTTAGTTT SH0306 309044 - 306786 - | hypothetical protein SH0307 309874 - 309089 - | hypothetical protein SH0308 310676 - 310041 - | hypothetical protein SH0309 311521 - 310676 - | hypothetical protein SH0310 312328 - 311612 - | hypothetical protein SH0311 312528 - 312325 - | hypothetical protein TERM 381 312667 - 312632 - R 73 -8.3 -3.37568 | opp_overlap 312632, overlap 312630 312629 TAGATATAAAAAGTA GCCTTCGGATTGTCT GGAGTA AGACATCCTGAAGGC TTGTATTACAGTGTT TERM 382 312632 - 312667 + r 74 -8.3 -3.68726 | opp_overlap 312632 312630 312629 TAGATATAAAAAGTA GCCTTCGGATTGTCT GGAGTA AGACATCCTGAAGGC TTGTATTACAGTGTT SH0312 313155 - 312673 - | hypothetical protein SH0313 313311 - 314231 + | hypothetical protein SH0314 314341 - 314228 - | hypothetical protein SH0315 314593 - 315762 + | hypothetical protein TERM 383 315821 - 315780 - T 75 -7.3 -4.1822 | opp_overlap 315780 GTTGAGTTGAAGAAA CACCTCTAGTGTCAGTGTG TCAT CGTACTGATATTAGAGGTG TTCTATTATAGTTAT TERM 384 315780 - 315821 + T 100 -16.1 -3.80597 | opp_overlap 315780 GTTGAGTTGAAGAAA CACCTCTAGTGTCAGTGTG TCAT CGTACTGATATTAGAGGTG TTCTATTATAGTTAT SH0316 316396 - 315833 - | hypothetical protein SH0317 318011 - 316470 - | hypothetical protein SH0318 318321 - 319280 + | hypothetical protein TERM 385 319434 - 319470 + F 86 -9.6 -3.76048 | opp_overlap 319437, overlap 319437 TCGCAGTAGCTGACT GAACTGAGATAGCT CTTAAATCT AGCTTTCTCAGTTC TTGTGTTCCTTGCGG SH0319 319557 - 320330 + | hypothetical protein SH0320 320332 - 321132 + | hypothetical protein SH0321 321258 - 321956 + | hypothetical protein TERM 386 322060 - 322071 + F 76 -4.4 -5.19003 | GATATGAGTGGCGTC CCAT TACC ATGG TTTATTTTTTATGTT SH0322 322413 - 322790 + | hypothetical protein TERM 387 322804 - 322846 + T 86 -9.4 -3.73858 | gap 1, opp_overlap 322804, overlap 322800 AGAAGTTATAAAAAA GAGGCTATCGCTTATAGGT TAATAC ACCTTTAA-TGATAGCCTC TTCATTTTCATATGC TERM 388 322846 - 322804 - T 91 -7.2 -5.3236 | gap 1, opp_overlap 322804 322800 AGAAGTTATAAAAAA GAGGCTATCGCTTATAGGT TAATAC ACCTTTAAT-GATAGCCTC TTCATTTTCATATGC TERM 389 322939 - 322907 - T 84 -10.7 -2.63089 | opp_overlap 322908, overlap 322906 322904 GATGAGTCCAAATAT TGAGATTAAGCAACC TTA GGTTGTTTAATCTCT TTTTTTGTTGTTGAC TERM 390 322908 - 322938 + T 100 -16.4 -5.95946 | opp_overlap 322907 322906 322904 ATGAGTCCAAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 324228 - 322912 - | transposase for ISSha1 TERM 391 324170 - 324184 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 392 324313 - 324343 + r 100 -16.4 -4.30987 | opp_overlap 324313 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 393 324343 - 324313 - R 100 -14.2 -5.20783 | opp_overlap 324313 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT SH0324 325449 - 324415 - | hypothetical protein TERM 394 326014 - 326000 - g 76 -7.8 -3.93236 | overlap 326001 GAGCAATTTGAGAAA CTGGCG AAG CGCCAA TTAAGATGCGGTGTG TERM 395 326013 - 326001 - g 73 -9.1 -2.95459 | overlap 326000 AGCAATTTGAGAAAC TGGCG AAG CGCCA ATTAAGATGCGGTGT SH0325 325667 - 326149 + | hypothetical protein TERM 396 326147 - 326188 + F 83 -6.7 -4.85894 | opp_overlap 326156, overlap 326150 326153 326156 ATGGTTAAAGAAGTG TAAGGATAAGGTTGAGACG AATA CGTTTCAACCTTGTATCTA TTTTATGTTTAATTT TERM 397 326150 - 326186 + F 78 -8.2 -4.01747 | gap 1, opp_overlap 326156, overlap 326147 326153 326156 GTTAAAGAAGTGTAA GG-ATAAGGTTGAGACG AATA CGTTTCAACCTTGTATC TATTTTATGTTTAAT TERM 398 326153 - 326182 + F 95 -12.3 -3.33336 | opp_overlap 326156, overlap 326150 326147 326156 AAAGAAGTGTAAGGA TAAGGTTGAGACG AATA CGTTTCAACCTTG TATCTATTTTATGTT TERM 399 326156 - 326179 + F 95 -11.8 -3.77193 | opp_overlap 326156, overlap 326153 326150 326147 GAAGTGTAAGGATAA GGTTGAGACG AATA CGTTTCAACC TTGTATCTATTTTAT TERM 400 326179 - 326156 - f 84 -9.6 -3.52539 | opp_overlap 326156 326153 326150 326147 GAAGTGTAAGGATAA GGTTGAGACG AATA CGTTTCAACC TTGTATCTATTTTAT TERM 401 328284 - 328274 - g 73 -4 -5.09426 | TTTAATGGTAAAAAA GTTA CTG TAAC TGATCCAACAAGTAC SH0326 326804 - 337630 + | hypothetical protein secY 337819 - 339018 + | preprotein translocase subunit SecY SH0328 339028 - 340602 + | hypothetical protein SH0329 340592 - 342154 + | hypothetical protein SH0330 342138 - 342680 + | hypothetical protein SH0331 342673 - 345063 + | preprotein translocase subunit SecA SH0332 345080 - 346588 + | hypothetical protein SH0333 346566 - 347918 + | hypothetical protein TERM 402 347933 - 347982 + T 100 -9.6 -5.54907 | gap 1, opp_overlap 347933, overlap 347976 AATGAGGATAATAAA GCTTTTGAGATGAATGAAGACTT ACAAA AAGTCTACTTTTA-CTCAAAAGC TTTTTGTTTTGTAAA TERM 403 347982 - 347933 - T 76 -7.4 -4.37157 | gap 1, opp_overlap 347933 347976 AATGAGGATAATAAA GCTTTTGAGATGAATGAAGACTT ACAAA AAGTCTACTTTTA-CTCAAAAGC TTTTTGTTTTGTAAA SH0334 348072 - 347971 - | hypothetical protein SH0335 349246 - 348248 - | hypothetical protein SH0336 349636 - 349250 - | hypothetical protein SH0337 349902 - 349633 - | hypothetical protein SH0338 350115 - 349924 - | hypothetical protein tnp 350366 - 351538 + | transposase for IS256 TERM 404 351682 - 351694 + G 71 -3.5 -5.02231 | GAAAAGATTATTTTT TATAA GTA TTATA TTTTTAGTATTTTTA SH0340 351665 - 351793 + | hypothetical protein SH0341 351815 - 352606 + | hypothetical protein SH0342 352674 - 353030 + | hypothetical protein SH0343 353105 - 353581 + | methionine sulfoxide reductase A SH0344 353718 - 354557 + | hypothetical protein TERM 405 354638 - 354606 - T 84 -10.7 -2.63089 | opp_overlap 354607, overlap 354605 354603 GATGAGTCCAAATAT TGAGATTAAGCAACC TTA GGTTGTTTAATCTCT TTTTTTGTTGTTGAC TERM 406 354607 - 354637 + T 100 -16.4 -5.95946 | opp_overlap 354606 354605 354603 ATGAGTCCAAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 355927 - 354611 - | transposase for ISSha1 TERM 407 355869 - 355883 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 408 356042 - 356012 - R 100 -14.2 -5.20783 | opp_overlap 356012 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 409 356012 - 356042 + r 100 -16.4 -4.30987 | opp_overlap 356012 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 410 356061 - 356099 + r 100 -14 -3.76226 | opp_overlap 356064, overlap 356063 356064 356066 ATTATAGAGCCTAAA AAATAGGACGTGTGATGA TAG TCATCGCACGTCCTACTC TTATATTATAAAGTT TERM 411 356063 - 356097 + r 100 -16.6 -3.45788 | opp_overlap 356064, overlap 356061 356064 356066 TATAGAGCCTAAAAA ATAGGACGTGTGATGA TAG TCATCGCACGTCCTAC TCTTATATTATAAAG TERM 412 356096 - 356064 - R 100 -17.9 -5.08169 | opp_overlap 356063 356061 356064 356066 ATAGAGCCTAAAAAA TAGGACGTGTGATGA TAG TCATCGCACGTCCTA CTCTTATATTATAAA TERM 413 356064 - 356096 + r 100 -20.1 -2.66991 | opp_overlap 356064, overlap 356063 356061 356066 ATAGAGCCTAAAAAA TAGGACGTGTGATGA TAG TCATCGCACGTCCTA CTCTTATATTATAAA TERM 414 356066 - 356094 + r 100 -18.3 -2.87018 | opp_overlap 356064, overlap 356064 356063 356061 AGAGCCTAAAAAATA GGACGTGTGATGA TAG TCATCGCACGTCC TACTCTTATATTATA SH0346 356482 - 356123 - | hypothetical protein SH0347 357556 - 356501 - | hypothetical protein SH0348 357782 - 358966 + | hypothetical protein SH0349 359023 - 359196 + | hypothetical protein TERM 415 359199 - 359239 + T 72 -7.1 -3.96624 | opp_overlap 359204, overlap 359204 AAAACGCAAATGACA AAAAAGCAATCTCAC TCTTAATTTAT GTGAGATTGCTTTTA TTTATCATAACAATA TERM 416 359204 - 359234 + T 86 -7 -5.02323 | opp_overlap 359204, overlap 359199 GCAAATGACAAAAAA GCAATCTCAC TCTTAATTTAT GTGAGATTGC TTTTATTTATCATAA TERM 417 359234 - 359204 - T 95 -7 -5.42265 | opp_overlap 359204 359199 GCAAATGACAAAAAA GCAATCTCAC TCTTAATTTAT GTGAGATTGC TTTTATTTATCATAA SH0350 359806 - 359237 - | hypothetical protein TERM 418 360017 - 359984 - R 100 -16.2 -5.42131 | opp_overlap 359991 GAACGATATAAAAAA GTGGGAGCGAAACT GAGTTT AGTTTCACTCCCAC GTAATAATAGCTACG SH0351 361094 - 360150 - | hypothetical protein TERM 419 360232 - 360250 + g 84 -5.4 -5.49729 | overlap 360234 GCTACTTGTTCTGGA TTTTTGTT ATC AACAAAGA TTTTTTTAGCTAATT TERM 420 361131 - 361145 + r 73 -8.6 -3.07043 | overlap 361134 TATTAGTCTCTAAGT TCGTCA TCA TGACGA TGTTGAGATGATCGG SH0352 363787 - 361118 - | hypothetical protein TERM 421 363918 - 363897 - R 86 -8.9 -4.26019 | opp_overlap 363892 363896 TAAGCATATTTAAAA TGTTACATT TGAT AATGTAACA AGTTATACCCACGTT SH0353 364256 - 364089 - | hypothetical protein TERM 422 364573 - 364533 - R 95 -12.1 -3.81951 | opp_overlap 364531 364539 GCGGATAGTATGAAA GAGCAATCATGTTAATAAA TAT TTAATCAACGTGATTGCTC AAATTTGCAGGAACT SH0354 365459 - 364587 - | hypothetical protein SH0355 365611 - 366222 + | hypothetical protein TERM 423 367278 - 367266 - g 76 -6.3 -4.48741 | CAAGCCATTACAAAA GTTGA AAA TCAAC AAGATAACACATCGA SH0356 366420 - 368432 + | hypothetical protein TERM 424 368443 - 368492 + F 71 -3.9 -5.00616 | gap 1, opp_overlap 368460, overlap 368446 AATAAATACAAACTT AAAGCGTGGATAAT-TGAGTAA TCATTAC TTACTTATGTTATCTACGCTTA TTTTTTGGAAAAGAG TERM 425 368446 - 368489 + F 72 -5.6 -4.61482 | gap 1, opp_overlap 368460, overlap 368443 AAATACAAACTTAAA GCGTGGATAAT-TGAGTAA TCATTAC TTACTTATGTTATCTACGC TTATTTTTTGGAAAA SH0357 368797 - 370371 + | hypothetical protein TERM 426 370423 - 370393 - f 74 -8.2 -3.58511 | opp_overlap 370393 AATTAAATATTAGAA CTGTCAACGGTGTC TAC GACGCTGTTGGCAG TTTTTTAATAGGTAT TERM 427 370393 - 370423 + F 100 -14.8 -5.17353 | opp_overlap 370393 AATTAAATATTAGAA CTGTCAACGGTGTC TAC GACGCTGTTGGCAG TTTTTTAATAGGTAT ptsG 370597 - 372135 + | phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific TERM 428 372207 - 372171 - T 100 -11.1 -5.13741 | opp_overlap 372173, overlap 372173 TTAATCTAATAAAAA TAGGCAATTTCTATTGT AAT AAAATAGAAATTGCCTT TTTGATCTATTATTT TERM 429 372205 - 372173 - T 100 -13.7 -4.18817 | opp_overlap 372173, overlap 372171 AATCTAATAAAAATA GGCAATTTCTATTGT AAT AAAATAGAAATTGCC TTTTTGATCTATTAT TERM 430 372173 - 372205 + T 100 -13.7 -4.88711 | opp_overlap 372171 372173 AATCTAATAAAAATA GGCAATTTCTATTGT AAT AAAATAGAAATTGCC TTTTTGATCTATTAT SH0359 374418 - 372256 - | N-acetylmuramoyl-L-alanine amidase TERM 431 374498 - 374519 + H 84 -8.9 -3.91541 | TATTTATTATGATTT TTAGTTGAT AAGT ATCAACTAA TTATTACTTTGCTCA TERM 432 375066 - 375049 - g 79 -4.1 -5.29385 | AAGTTAATCAAAAAA TCAATGC CGTC GCACCGA AAATGACTGATACAG SH0360 374628 - 377444 + | hypothetical protein TERM 433 377460 - 377517 + T 73 -8.1 -3.49065 | gap 1, opp_overlap 377474, overlap 377462 377474 TTACGGAAACGATAT TTGTACTATAAAAAGCATTCTAACCT TATAAAT GGGCTAGAATGCTTTTTAT-GTGCTA TATATTTATTGTTGC TERM 434 377462 - 377515 + T 90 -10.7 -3.29892 | gap 1, opp_overlap 377474, overlap 377460 377474 ACGGAAACGATATTT GTACTATAAAAAGCATTCTAACCT TATAAAT GGGCTAGAATGCTTTTTAT-GTGC TATATATTTATTGTT TERM 435 377474 - 377504 + T 82 -6.2 -5.02502 | opp_overlap 377474, overlap 377462 377460 TTTGTACTATAAAAA GCATTCTAACCT TATAAAT GGGCTAGAATGC TTTTTATGTGCTATA TERM 436 377504 - 377474 - T 88 -7.7 -4.91109 | opp_overlap 377474 377462 377460 TTTGTACTATAAAAA GCATTCTAACC TTATAAATG GGCTAGAATGC TTTTTATGTGCTATA SH0361 378059 - 377538 - | hypothetical protein SH0363 378808 - 378764 - | hypothetical protein SH0362 378261 - 378791 + | hypothetical protein TERM 437 378835 - 378801 - GT 75 -8.7 -3.45634 | gap 1, opp_overlap 378803, overlap 378803 AAATAATATTTAGAA GAGCGCATAAATG-GG ACTT CCTCATCTATGCGCTT TAATTTATCTCTAGT TERM 438 378803 - 378833 + gT 100 -10.5 -4.19648 | opp_overlap 378801 378803 ATAATATTTAGAAGA GCGCATAAATGGG ACTTC CTCATCTATGCGC TTTAATTTATCTCTA TERM 439 378833 - 378803 - GT 93 -11.3 -3.28582 | gap 1, opp_overlap 378803, overlap 378801 ATAATATTTAGAAGA GCGCATAAATG-GG ACTT CCTCATCTATGCGC TTTAATTTATCTCTA SH0364 379315 - 378902 - | hypothetical protein SH0365 379779 - 380276 + | hypothetical protein SH0366 380463 - 380927 + | hypothetical protein TERM 440 381702 - 381688 - g 77 -5.7 -4.90917 | AAATTGAATTAAAAA CAACG CATCT CGTTG AATACATGGATGATA arcA 381285 - 382520 + | arginine deiminase arcD 382689 - 384119 + | arginine/oirnithine antiporter SH0369 384154 - 384837 + | hypothetical protein TERM 441 384923 - 384946 + F 100 -11.8 -4.7078 | opp_overlap 384923 384925 ATAATTGCTACTTAA GACGTTGGTG ACAT CACTAACGTC TTTTTGCATGCTTGG TERM 442 384946 - 384923 - f 78 -9.6 -3.0701 | opp_overlap 384923, overlap 384925 ATAATTGCTACTTAA GACGTTGGTG ACAT CACTAACGTC TTTTTGCATGCTTGG SH0370 385031 - 385792 + | hypothetical protein TERM 443 385873 - 385831 - f 82 -9.4 -3.47416 | gap 2, overlap 385829 AAATGATGAATAATA GGGAGTGGGAC-A-GAATTC TTTTT AAATTCGTCGTCCCACCCCC GCAAGGATGACTAGA TERM 444 385911 - 385899 - f 72 -3.4 -5.1925 | overlap 385881 CTAGAACTGAAAAAA GCTT GATTT AAGC GCATTTTCAGTTCAG SH0371 386086 - 387081 + | hypothetical protein SH0372 387241 - 388089 + | hypothetical protein adhC 388114 - 389241 + | Zn-dependent alcohol dehydrogenase, class III TERM 445 389274 - 389307 + T 86 -9 -4.39329 | opp_overlap 389275, overlap 389275 GACTGAATAACGAAA AGTCCTCTATTTCA AATGAA TGAAGTAGAGGACC TTTGTTGTATAAAGT TERM 446 389306 - 389275 - T 93 -10.3 -4.56736 | opp_overlap 389274 389275 ACTGAATAACGAAAA GTCCTCTATTTCA AATGAA TGAAGTAGAGGAC CTTTGTTGTATAAAG TERM 447 389275 - 389306 + T 95 -12.5 -3.22874 | opp_overlap 389275, overlap 389274 ACTGAATAACGAAAA GTCCTCTATTTCA AATGAA TGAAGTAGAGGAC CTTTGTTGTATAAAG SH0374 389660 - 389328 - | hypothetical protein SH0375 389859 - 391001 + | hypothetical protein TERM 448 391061 - 391007 - T 87 -8.2 -4.64048 | gap 3, opp_overlap 391016 391018 391019 391022, overlap 391019 391022 GAGTATATAAATAAA GCTATACACAAACAAGCCTGCGACAAT ATTA AATGTCGCAGGCTTGAT-GT-T-TAGC AGAAGCAATATTTTT TERM 449 391016 - 391055 + T 95 -12.2 -3.53091 | opp_overlap 391007 391019 391022, overlap 391018 391019 391022 AATAAAGCTATACAC AAACAAGCCTGCGACAAT ATTA AATGTCGCAGGCTTGATG TTTAGCAGAAGCAAT TERM 450 391018 - 391053 + T 100 -14.8 -3.34398 | opp_overlap 391007 391019 391022, overlap 391016 391019 391022 TAAAGCTATACACAA ACAAGCCTGCGACAAT ATTA AATGTCGCAGGCTTGA TGTTTAGCAGAAGCA TERM 451 391019 - 391052 + T 100 -18.3 -2.60496 | opp_overlap 391019 391007 391022, overlap 391018 391016 391022 AAAGCTATACACAAA CAAGCCTGCGACAAT ATTA AATGTCGCAGGCTTG ATGTTTAGCAGAAGC TERM 452 391052 - 391019 - T 100 -18.3 -4.15664 | opp_overlap 391018 391016 391019 391022, overlap 391007 391022 AAAGCTATACACAAA CAAGCCTGCGACAAT ATTA AATGTCGCAGGCTTG ATGTTTAGCAGAAGC TERM 453 391049 - 391022 - T 100 -14.2 -4.18674 | opp_overlap 391022 391019 391018 391016, overlap 391019 391007 GCTATACACAAACAA GCCTGCGACAAT ATTA AATGTCGCAGGC TTGATGTTTAGCAGA TERM 454 391022 - 391049 + T 100 -14.2 -3.45571 | opp_overlap 391019 391007 391022, overlap 391019 391018 391016 GCTATACACAAACAA GCCTGCGACAAT ATTA AATGTCGCAGGC TTGATGTTTAGCAGA SH0376 392715 - 391075 - | hypothetical protein SH0377 392867 - 393316 + | hypothetical protein TERM 455 393365 - 393336 - f 100 -13.8 -4.30719 | opp_overlap 393336 TGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTTATGTTTTTGA TERM 456 393336 - 393365 + F 100 -13.8 -5.36364 | opp_overlap 393336 TGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTTATGTTTTTGA TERM 457 393806 - 393790 - g 73 -4.5 -4.88918 | TTATTTCAAATAAAA CAAAACT TGC AGTTTTA AATAAAGCACAAGAA TERM 458 394773 - 394743 - g 100 -16.4 -5.95946 | opp_overlap 394741 394751 394752 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTAGGACTCAT tnp 393453 - 394769 + | transposase for ISSha1 TERM 459 394823 - 394856 + F 100 -9.8 -5.1286 | opp_overlap 394823 GCCTAAATATTTAAA GCACTAGAATGTTT AATTAA GAATATTCTAGTGC TTTTTATACTTTTTA TERM 460 395161 - 395145 - g 88 -7.3 -5.17353 | opp_overlap 395145 ATAGTTATCAAAAAA TGCAACA AAA TGCTGCA TTGAATCAAAAAAAT SH0379 395009 - 395284 + | hypothetical protein SH0380 395683 - 395871 + | hypothetical protein SH0381 395968 - 396300 + | hypothetical protein TERM 461 396365 - 396406 + F 95 -11.1 -4.44448 | opp_overlap 396366 396368, overlap 396368 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 462 396405 - 396366 - f 100 -12.4 -4.07562 | opp_overlap 396365 396368, overlap 396368 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 463 396368 - 396403 + F 100 -17.2 -4.33281 | opp_overlap 396366 396368, overlap 396365 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 464 396403 - 396368 - f 100 -15 -3.62348 | opp_overlap 396368 396365, overlap 396366 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 465 396741 - 396725 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 466 397495 - 397509 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG tnp 396609 - 398228 + | IS1272 transposase TERM 467 398236 - 398204 - T 93 -8 -5.35222 | opp_overlap 398204 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC TERM 468 398204 - 398236 + T 93 -8 -5.1925 | opp_overlap 398204 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC SH0383 399262 - 398297 - | putative carbamoyl phosphate synthase large subunit TERM 469 398985 - 398996 + g 77 -3 -5.46706 | AACTTTACATCAATT TCTT CAAA AAGA TTTTTATTTTGAGCT SH0384 399762 - 399262 - | hypothetical protein SH0385 400372 - 399782 - | hypothetical protein TERM 470 400519 - 400501 - R 100 -11.8 -5.24129 | opp_overlap 400501 400498 400497 400494 TTTTGCTATAAAAAA GCGCAATT TAA AATTGCGC TAGATTATTACTATT TERM 471 400501 - 400519 + r 93 -11.8 -2.68544 | opp_overlap 400501, overlap 400498 400497 400494 TTTTGCTATAAAAAA GCGCAATT TAA AATTGCGC TAGATTATTACTATT acpD 401160 - 400534 - | azoreductase TERM 472 401204 - 401179 - H 74 -6.3 -4.56775 | opp_overlap 401179 401182 AGTTCTCCTCAAAAA TAATTATTTCG AAAT CGATATAATTA ATATATTTGATTTTC SH0387 401382 - 401483 + | hypothetical protein TERM 473 401487 - 401531 + F 95 -12.5 -3.81279 | opp_overlap 401478 401487, overlap 401493 ATCGAATATTAAAAA TAATAAGTCAAGATGTTTTCA TAT TGAAAATGTCTTGGCTTTTTA TATTTTGTGAAGTAT TERM 474 401531 - 401487 - f 78 -5.9 -4.88228 | opp_overlap 401487 401493, overlap 401478 ATCGAATATTAAAAA TAATAAGTCAAGATGTTTTCA TAT TGAAAATGTCTTGGCTTTTTA TATTTTGTGAAGTAT TERM 475 401493 - 401525 + F 100 -11.5 -5.32599 | opp_overlap 401487, overlap 401487 TATTAAAAATAATAA GTCAAGATGTTTTCA TAT TGAAAATGTCTTGGC TTTTTATATTTTGTG TERM 476 401864 - 401837 - f 75 -8.6 -3.44443 | opp_overlap 401835 TTTAGATAAGATGAA CTGTAATGATTT TTTA AGATCATTACAG CAATATATTAGTTAA capA 402008 - 402670 + | capsular polysaccharide synthesis enzyme CapA capB 402683 - 403384 + | capsular polysaccharide synthesis enzyme CapB TERM 477 403518 - 403470 - g 100 -10.6 -4.25256 | gap 1, opp_overlap 403475, overlap 403467 403471 GCTTTATTAAAACAA GCAAATGATGAAGGAGTCACA GAAATTAT TGCGACTCCT-CATCATTTGA GTCCTACTTTTGATA TERM 478 403517 - 403471 - g 93 -14.1 -3.14672 | gap 1, opp_overlap 403475, overlap 403470 403467 CTTTATTAAAACAAG CAAATGATGAAGGAGTCACA GAAATTAT TGCGACTCCT-CATCATTTG AGTCCTACTTTTGAT TERM 479 403475 - 403513 + G 71 -7.6 -3.70438 | gap 1, opp_overlap 403471 403470 403467 ATTAAAACAAGCAAA TGATGAAGGAGTCACAG AAATTA TTGCGACTCCT-CATCA TTTGAGTCCTACTTT capC 403386 - 404153 + | capsular polysaccharide synthesis enzyme CapC TERM 480 404623 - 404607 - g 78 -2.2 -5.67283 | AAGCTAAAGAAAAAA CCGACA CTCAT TGTAGG CGCAGGTCGCGGTGG capD 404184 - 405983 + | capsular polysaccharide biosynthesis protein CapD capE 405994 - 407016 + | capsular polysaccharide synthesis enzyme CapE capF 407028 - 408137 + | capsular polysaccharide synthesis enzyme CapF capG 408141 - 409265 + | capsular polysaccharide synthesis enzyme CapG capH 409265 - 410572 + | hypothetical protein TERM 481 410821 - 410837 + G 71 -3.1 -5.07971 | overlap 410823 CCACATACATAATTA TGTTAAT TCC ATTAATA TTTTTAATTATTTTA TERM 482 410941 - 410927 - g 83 -7.2 -4.83032 | opp_overlap 410927 AGAGGAAACAGAAAA GCTATT TAA AATAGC TTTCTTCTTGTTTCC TERM 483 410927 - 410941 + G 80 -7.2 -4.62803 | opp_overlap 410927 AGAGGAAACAGAAAA GCTATT TAA AATAGC TTTCTTCTTGTTTCC TERM 484 411014 - 411071 + G 82 -7.5 -4.5187 | ATATTTCAAGTCCTA TATTGTTAATATTATGCAATTTTTAAA TTTA TTTGTGAATTGCATAATAATAAAAATA TTTGATTTTTTTGAA capI 410550 - 411863 + | hypothetical protein TERM 485 412345 - 412329 - g 71 -6.7 -4.10257 | opp_overlap 412332, overlap 412332 AATTGAAAAATATAA TAACAAT ATA ATTGTTA ACTTGCCAAATTTTA TERM 486 412539 - 412525 - g 70 -4.4 -4.78077 | GGTAATGAAAATAAA TATATT GAA AATATA AGAAAAATTATTAAT capJ 411874 - 412887 + | hypothetical protein capK 412906 - 414123 + | hypothetical protein capL 414120 - 415253 + | hypothetical protein capM 415460 - 416209 + | hypothetical protein TERM 487 416256 - 416211 - T 100 -14.3 -3.9444 | opp_overlap 416216, overlap 416216 TAAATCTTAACTAAA TGAAAGCACCTTGTCGATGAT ATAA ATCATTGACAAAGTGCTTTTA AATTGCAATTAACCT TERM 488 416216 - 416251 + T 100 -14.2 -4.28432 | opp_overlap 416216 416211 CTTAACTAAATGAAA GCACCTTGTCGATGAT ATAA ATCATTGACAAAGTGC TTTTAAATTGCAATT TERM 489 416251 - 416216 - T 100 -14.2 -4.14598 | opp_overlap 416216, overlap 416211 CTTAACTAAATGAAA GCACCTTGTCGATGAT ATAA ATCATTGACAAAGTGC TTTTAAATTGCAATT phoB 417774 - 416299 - | alkaline phosphatase III precursor TERM 490 416507 - 416523 + g 83 -7.3 -4.8083 | GCATCTTGAAGTTTA GTAGTTG CTG CAGCTAC TTTTTCATCGTCTTC SH0402 418173 - 418343 + | hypothetical protein TERM 491 418395 - 418439 + F 76 -4.6 -5.28683 | gap 2, overlap 418396 TAATCTTTATTATGA TTGAAGCGGTACGTTGAAATAG TCA TTATTTCG--GTATCGCTTCAG TTTTTTGATGTTCAT SH0403 418529 - 418693 + | hypothetical protein SH0404 418723 - 419391 + | hypothetical protein SH0405 419394 - 420290 + | hypothetical protein TERM 492 420310 - 420349 + F 100 -5.8 -6.14618 | opp_overlap 420311, overlap 420311 TCAATATTGTAAGCT AGCCAACAACATCTGTAA GAAA TTATCAATGTTGTTGGCG TTTTTTTGTTTTATG TERM 493 420348 - 420311 - f 75 -9.3 -2.55 | opp_overlap 420310 420311 CAATATTGTAAGCTA GCCAACAACATCTGTAA GAAA TTATCAATGTTGTTGGC GTTTTTTTGTTTTAT TERM 494 420311 - 420348 + F 88 -9.3 -4.25111 | opp_overlap 420311, overlap 420310 CAATATTGTAAGCTA GCCAACAACATCTGTAA GAAA TTATCAATGTTGTTGGC GTTTTTTTGTTTTAT SH0406 420472 - 421221 + | hypothetical protein SH0407 421223 - 423214 + | hypothetical protein SH0408 423303 - 424496 + | hypothetical protein TERM 495 424535 - 424514 - f 76 -8.7 -3.54424 | opp_overlap 424514 GTTGAGTCGTTTAAA GAGTGAGAC GAGT GTCTCGCTC TTTTTAATTGCAATA TERM 496 424514 - 424535 + F 100 -10.9 -4.87291 | opp_overlap 424514 GTTGAGTCGTTTAAA GAGTGAGAC GAGT GTCTCGCTC TTTTTAATTGCAATA TERM 497 424556 - 424587 + F 71 -7.3 -3.83816 | opp_overlap 424556 AATTGCAATAAAGAA GTCGGTGACGC CCCTAAGTTA GCATCACCGAC TTTACGTTAATTTCT TERM 498 424587 - 424556 - f 91 -10.2 -4.2204 | opp_overlap 424556 AATTGCAATAAAGAA GTCGGTGACGCC CCTAAGTT AGCATCACCGAC TTTACGTTAATTTCT TERM 499 424788 - 424758 - f 75 -3.4 -5.37593 | TTTTAAAGTAAAAAA TACGCAACCTTC ACTATAG AAAAGTTACGTA AATGATAGATGTGAG SH0409 425190 - 426386 + | hypothetical protein SH0410 426383 - 427501 + | hypothetical protein SH0411 427676 - 428254 + | hypothetical protein SH0412 428193 - 428489 + | hypothetical protein SH0413 428686 - 429417 + | hypothetical protein cysJ 429596 - 431464 + | sulfite reductase flavoprotein subunit TERM 500 431451 - 431441 - f 70 -5.4 -4.46976 | overlap 431435 ATGAAGAAAGATAAA CGTT ACC AACG CGATGTGTACTAATA SH0415 431483 - 433204 + | sulfite reductase subunit beta TERM 501 433383 - 433393 + G 74 -5.4 -4.81212 | ATTTAGCTAAACCAG GAAC AAA GTTC TTTTATTGTGGTAAA SH0416 433241 - 434005 + | hypothetical protein SH0417 434049 - 434660 + | precorrin-2 dehydrogenase SH0418 434681 - 435550 + | hypothetical protein sat 435602 - 436780 + | sulfate adenylyltransferase SH0420 436797 - 437396 + | hypothetical protein TERM 502 437412 - 437443 + F 79 -6.6 -4.71401 | overlap 437414 AATTATTATGCGTGT GAGGCTGGGACA AAATAAAA TGTCTCAGCCTA TTTTATCATTTTGTT TERM 503 437414 - 437441 + F 84 -9.2 -3.9392 | overlap 437412 TTATTATGCGTGTGA GGCTGGGACA AAATAAAA TGTCTCAGCC TATTTTATCATTTTG SH0421 437800 - 439170 + | hypothetical protein TERM 504 439220 - 439270 + F 100 -9.5 -5.03945 | opp_overlap 439219 439226, overlap 439226 439268 ATTGAATAATTAAAC TCATAATCCTCCTTATAAG-CAT GTCGCTA ATGTCTTATAAGGGGGATT-TGA TTTTTATCATTATTA TERM 505 439226 - 439265 + F 88 -9.6 -4.3902 | gap 1, opp_overlap 439219 439226, overlap 439220 TAATTAAACTCATAA TCCTCCTTATAAG-CAT GTCGCTA ATGTCTTATAAGGGGGA TTTGATTTTTATCAT TERM 506 439524 - 439541 + F 73 -8.5 -3.10053 | overlap 439526 AAACCCTTAACATTC CACACAA ACCC TTGTGTG TCTGTTAGAGTATGT SH0422 439553 - 439666 + | hypothetical protein SH0423 439690 - 440481 + | hypothetical protein TERM 507 440499 - 440527 + F 100 -12.5 -5.48213 | opp_overlap 440502 TGAAATCACTTTTAA CCACGATTCCTTA TCA TACGGAGTCGTGG TTTTTCTTTTGAGTA SH0424 440662 - 440928 + | hypothetical protein TERM 508 440940 - 440976 + F 100 -11.1 -4.74504 | gap 1, opp_overlap 440940 440939 ATAATGATTATAAAC CCCTTGGAAG-ATGCT ATATCA AGCATACTTTCAAGGG TTTTTAAATTGAAAT TERM 509 440976 - 440940 - f 76 -8.9 -3.01133 | gap 1, opp_overlap 440940, overlap 440939 ATAATGATTATAAAC CCCTTGGAAG-ATGCT ATATCA AGCATACTTTCAAGGG TTTTTAAATTGAAAT TERM 510 441475 - 441487 + G 73 -7.7 -3.81755 | ATTTGGTGTAGGTAC CGCAA ATA TTGCG TTATCTTTAGAGCCT SH0425 441152 - 442444 + | anaerobic C4-dicarboxylate transporter TERM 511 442452 - 442490 + F 100 -12.7 -5.08255 | gap 1, opp_overlap 442452 GATTATAGATTATAA GACCACT-AATTTTGGGC AAAT GCTCAAAGTTTAGTGGTC TTTTCTTTTGAAAAT TERM 512 442490 - 442452 - f 73 -8.3 -3.50492 | gap 1, opp_overlap 442452 GATTATAGATTATAA GACCACTA-ATTTTGGGC AAAT GCTCAAAGTTTAGTGGTC TTTTCTTTTGAAAAT cudT/betT 442792 - 444432 + | choline-glycine betaine transporter TERM 513 444489 - 444441 - T 100 -12 -5.72622 | opp_overlap 444443 444470, overlap 444443 CTTATAAATAAAAAA GAGCTAGCAGATTCTTCAAAGT TTTAC ACTTTAGAAAATCTGCTAGCTT TTTTAAATATCTTCT TERM 514 444487 - 444443 - T 100 -14.6 -4.49311 | opp_overlap 444443 444470, overlap 444441 TATAAATAAAAAAGA GCTAGCAGATTCTTCAAAGT TTTAC ACTTTAGAAAATCTGCTAGC TTTTTTAAATATCTT TERM 515 444443 - 444487 + T 100 -12.4 -5.15381 | opp_overlap 444443 444441, overlap 444470 TATAAATAAAAAAGA GCTAGCAGATTCTTCAAAGT TTTAC ACTTTAGAAAATCTGCTAGC TTTTTTAAATATCTT SH0427 445046 - 444492 - | hypothetical protein TERM 516 445290 - 445267 - H 70 -6.2 -4.08767 | TCTAGTTTTGTAAAA TTCGTTAAAT AAAA ATTTAACAAA CTTAACGGAGGTAGT gbsA 445309 - 446799 + | glycine betaine aldehyde dehydrogenase, GbsA TERM 517 447361 - 447341 - g 74 -6.1 -4.53705 | opp_overlap 447345 447346, overlap 447346 AACGTTTAGAGAAAA CATACGGTG CTA CACCATTTG ATCAATTCAGAGGAC TERM 518 447600 - 447588 - g 75 -4.9 -4.83759 | AATGAAACGTAAAAA CTTAA CAG TTAAG ACTCGTGCATTTGTC betA 446941 - 448647 + | choline dehydrogenase TERM 519 448780 - 448826 + F 100 -14.7 -3.48703 | gap 2, opp_overlap 448795 448796 448799 448800, overlap 448777 CTAGTTATCCCTGCG GGGGGAGTGGGACAATGAATTCA AAA TGAATTC-T-GACTCACTCCCCC TTACTATTTAACTTT TERM 520 450379 - 450367 - g 93 -4.9 -5.99154 | opp_overlap 450367 CAGTAAACAAAAAAA TAACT TGA AGTTA CTATTTAAAGATCAT SH0430 448949 - 451213 + | hypothetical protein TERM 521 451259 - 451215 - f 100 -14.7 -3.95555 | opp_overlap 451217, overlap 451216 451232 ATAAGTATGTATAAA TTGGATAATGACAAAAATTAA TCA TTAATTTTTGTCATTATCCTT TTTTAATTCAAAAAT TERM 522 451258 - 451216 - f 100 -18.2 -2.9661 | opp_overlap 451217, overlap 451215 451232 TAAGTATGTATAAAT TGGATAATGACAAAAATTAA TCA TTAATTTTTGTCATTATCCT TTTTTAATTCAAAAA TERM 523 451217 - 451257 + F 100 -21.7 -5.26875 | opp_overlap 451216 451215 451232 AAGTATGTATAAATT GGATAATGACAAAAATTAA TCA TTAATTTTTGTCATTATCC TTTTTTAATTCAAAA SH0431 451360 - 452535 + | hypothetical protein SH0432 452548 - 453930 + | hypothetical protein TERM 524 453951 - 453990 + F 91 -6.6 -5.40072 | opp_overlap 453951 453949 453954 GATAACCATTTAACA GAAGTATATGCAAGCATT TATC AATGTTCACATATGCTTC TTTTTTTCGGGAAAA SH0433 454113 - 455294 + | hypothetical protein SH0434 455411 - 455623 + | hypothetical protein SH0435 455695 - 456168 + | hypothetical protein acs 456335 - 457930 + | acetate-CoA ligase TERM 525 457951 - 457991 + T 91 -7.7 -5.23644 | opp_overlap 457952 457954, overlap 457954 ATTTCAATGTATAAA AGACACCTCGTTAAATG CTTTGGT CATCTAACGAGGTGTTA TTTTTGTGTTTGATT TERM 526 457990 - 457952 - T 100 -11.2 -4.4715 | opp_overlap 457951 457954, overlap 457954 TTTCAATGTATAAAA GACACCTCGTTAAATG CTTTGGT CATCTAACGAGGTGTT ATTTTTGTGTTTGAT TERM 527 457988 - 457954 - T 100 -13.8 -3.84304 | opp_overlap 457954 457951, overlap 457952 TCAATGTATAAAAGA CACCTCGTTAAATG CTTTGGT CATCTAACGAGGTG TTATTTTTGTGTTTG TERM 528 457954 - 457988 + T 100 -11.6 -4.67478 | opp_overlap 457952 457954, overlap 457951 TCAATGTATAAAAGA CACCTCGTTAAATG CTTTGGT CATCTAACGAGGTG TTATTTTTGTGTTTG SH0437 458365 - 458036 - | hypothetical protein SH0438 458805 - 458371 - | hypothetical protein SH0439 458926 - 459321 + | hypothetical protein SH0440 459488 - 459808 + | hypothetical protein ppsA 460016 - 462643 + | pyruvate phosphate dikinase SH0442 462645 - 463475 + | hypothetical protein TERM 529 463537 - 463564 + F 100 -10 -4.77165 | opp_overlap 463537 TGAGATGAATTTAAA CACTTAGTTGCA TATC TGTAACTAGGTG TTTTCTTATAAAAAA TERM 530 464550 - 464539 - g 84 -5.8 -5.32882 | opp_overlap 464547 CATTACTACAAAAAA CAGG TATC CCTG AAAGTAAACATTTAG mqo 463785 - 465278 + | malate:quinone oxidoreductase TERM 531 465328 - 465296 - f 77 -7.8 -4.20367 | opp_overlap 465296 TGTTTTAATAAATAA GAGTCGCTTGAG AGTTTATAG CTTAAGCGACTC TTTTTCTAACTTTCT TERM 532 465296 - 465328 + F 100 -10 -4.95896 | opp_overlap 465296 TGTTTTAATAAATAA GAGTCGCTTGAG AGTTTATAG CTTAAGCGACTC TTTTTCTAACTTTCT SH0444 465373 - 465507 + | hypothetical protein TERM 533 465552 - 465603 + F 91 -6.9 -5.52384 | gap 2, opp_overlap 465552 CAGAATACAACATAA GCTTTCAATCATTTTCAAAGCGTAG CTAA CT-TGCTTTGGAT-TGGTTGAAAGC TTTTTTTAATGAGAA SH0445 465687 - 465971 + | hypothetical protein SH0446 465990 - 466142 + | hypothetical protein SH0447 466127 - 466537 + | hypothetical protein SH0448 466550 - 466867 + | hypothetical protein TERM 534 466874 - 466912 + F 83 -8.4 -4.43309 | overlap 466878 AATGAATAATAATCG TAAATACTATTCTGACAG AGT TTGTTGGGGTAGTATTTA TTTTCATTAAAATTA TERM 535 466878 - 466908 + F 70 -4.8 -4.78077 | overlap 466874 AATAATAATCGTAAA TACTATTCTGACAG AGT TTGTTGGGGTAGTA TTTATTTTCATTAAA TERM 536 466967 - 466925 - f 81 -8.1 -4.26076 | gap 1, opp_overlap 466925, overlap 466926 466928 TTATTTTCATTAAAA TTATTTCGATATATCGCTTT ACTT ATAACGATATATCGAAA-AA GTGATTAATTAAATA TERM 537 466967 - 466926 - f 79 -9.7 -3.15324 | opp_overlap 466925, overlap 466925 466928 TATTTTCATTAAAAT TATTTCGATATATCGCTTT ACTT ATAACGATATATCGAAAAA GTGATTAATTAAATA TERM 538 466965 - 466928 - f 95 -12.3 -3.13504 | opp_overlap 466925, overlap 466925 466926 TTTTCATTAAAATTA TTTCGATATATCGCTTT ACTT ATAACGATATATCGAAA AAGTGATTAATTAAA SH0449 467042 - 467206 + | hypothetical protein TERM 539 467256 - 467211 - T 93 -10 -4.63048 | gap 1, opp_overlap 467221, overlap 467216 467221 TCTATAAATAATAAA TATTAGAAAAGCCGGCTGGTT GAAAT AACCAGTCGGCTTTTA-AATA TTCGAGTGAAGTTGT TERM 540 467252 - 467216 - T 95 -12.4 -2.99258 | opp_overlap 467221, overlap 467211 467221 AAATAATAAATATTA GAAAAGCCGGCTGGTT GAAAT AACCAGTCGGCTTTTA AATATTCGAGTGAAG TERM 541 467247 - 467221 - T 100 -12.3 -4.59207 | opp_overlap 467221, overlap 467216 467211 ATAAATATTAGAAAA GCCGGCTGGTT GAAAT AACCAGTCGGC TTTTAAATATTCGAG TERM 542 467221 - 467247 + T 100 -15.2 -4.28254 | opp_overlap 467221 467216 467211 ATAAATATTAGAAAA GCCGGCTGGTTG AAA TAACCAGTCGGC TTTTAAATATTCGAG SH0450 468668 - 467778 - | fructose-1,6-bisphosphate aldolase SH0451 468842 - 469324 + | hypothetical protein TERM 543 469621 - 469607 - g 70 -7.2 -3.75005 | opp_overlap 469607 469605, overlap 469605 AAAAGCGAATAAAGA TACGTT TGA AACGTA TACGTTGTTTAAAGA SH0452 469521 - 470267 + | hypothetical protein TERM 544 470319 - 470282 - f 100 -10.1 -4.87626 | opp_overlap 470282 GTTTAATATGAAAAA TAGAGTGTATAGAAAGT AACT ATTTTCTGTACACTCTA TTTTTATGCGTGATG TERM 545 470282 - 470319 + F 100 -14.5 -4.88736 | opp_overlap 470282 GTTTAATATGAAAAA TAGAGTGTATAGAAAGT AACT ATTTTCTGTACACTCTA TTTTTATGCGTGATG SH0453 470584 - 471909 + | hypothetical protein TERM 546 471941 - 471982 + F 95 -11.1 -4.44448 | opp_overlap 471942 471944, overlap 471944 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 547 471981 - 471942 - f 100 -12.4 -4.07562 | opp_overlap 471941 471944, overlap 471944 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 548 471944 - 471979 + F 100 -17.2 -4.33281 | opp_overlap 471942 471944, overlap 471941 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 549 471979 - 471944 - f 100 -15 -3.62348 | opp_overlap 471944 471941, overlap 471942 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0454 471952 - 472101 + | hypothetical protein TERM 550 472317 - 472301 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 551 473071 - 473085 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 552 473813 - 473781 - g 90 -8 -5.35222 | opp_overlap 473781 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC TERM 553 473781 - 473813 + G 90 -8 -5.1925 | opp_overlap 473781 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC tnp 472185 - 473873 + | IS1272 transposase SH0456 474484 - 473855 - | hypothetical protein SH0457 475106 - 474681 - | hypothetical protein TERM 554 475072 - 475061 - G 73 -4.4 -4.95167 | TAAGTAATAATAAAA TGCT AATT AGCA ATGCGCTAAGAAAGT TERM 555 475384 - 475355 - H 78 -9.5 -3.10499 | opp_overlap 475358 475360 475373, overlap 475358 CAATACTTTAAGAGA TAAGAGAAAGTCT ATCG ATACTTTCTCTTA AATAATAGAAAGTAT TERM 556 475373 - 475398 + H 100 -6.3 -5.80248 | opp_overlap 475358 475355, overlap 475360 475358 GAGAAAGTCTATCGA TACTTTCTCTT AAAT AATAGAAAGTA TTTTTTTATGTCTTC TERM 557 476000 - 475988 - g 83 -4.9 -5.45802 | CGCTGAAAATAAAAA GAATT TAA AATTC AATCATCAACAAGGG SH0458 475473 - 476288 + | hypothetical protein TERM 558 476306 - 476329 + F 88 -9.6 -4.40561 | opp_overlap 476306, overlap 476303 ATCCATATTAAACTA CCCGCAAAGT AATT GCTTTGTGGG TTCTTTTTAAAAAGA argD 476531 - 477868 + | 4-aminobutyrate aminotransferase TERM 559 477911 - 477877 - T 100 -12.3 -4.4261 | opp_overlap 477880, overlap 477880 CTGGTAACACGAAAA GAAGCACCTATCTCA ATCGA TGAGACAGGTGCTTT TTCATTTGTATTAAT TERM 560 477908 - 477880 - T 100 -14 -4.32583 | opp_overlap 477880, overlap 477877 GTAACACGAAAAGAA GCACCTATCTCA ATCGA TGAGACAGGTGC TTTTTCATTTGTATT TERM 561 477880 - 477908 + T 100 -11.8 -5.08367 | opp_overlap 477877 477880 GTAACACGAAAAGAA GCACCTATCTCA ATCGA TGAGACAGGTGC TTTTTCATTTGTATT SH0460 479373 - 477922 - | hypothetical protein TERM 562 479718 - 479738 + H 100 -12.7 -3.49102 | ATTAAAGTTTGTTGA CCTATTCCA TTA TGGAATAGG TTCTATCGAAAATAT TERM 563 480292 - 480275 - g 72 -4.9 -4.71828 | gap 1 ACGTCACGAACAAAA TGCTGCCA TGA TGGCA-CA AGGTATCGGTCGTTT alsS 480114 - 481778 + | acetolactate synthase TERM 564 482185 - 482174 - g 74 -2.2 -5.50499 | overlap 482157 482176 GTACATTTAAAAAAA TGCA CGTA CGCA TGATGCCTAAACAAG SH0462 481813 - 482517 + | hypothetical protein TERM 565 482591 - 482540 - f 75 -9.3 -2.77104 | gap 3, opp_overlap 482560, overlap 482539 482560 TCATAACTATAGAAG GGAGTAGGAC-A-GAAATAATATTTT CTC AAAAT-TTATTTCGTAGTCCTACCCC GGCAAGGATGACTAG TERM 566 482630 - 482618 - f 89 -7.7 -5.02074 | CTAGGTTTGAAAAAA GCTTG ATT CAAGC GCATTTTCAAATCAG TERM 567 482701 - 482670 - f 79 -6.6 -4.70046 | opp_overlap 482670 482672, overlap 482672 GACAAAATGATAAAA TAGGCTGAGACA TTTTATTT TGTCCCAGCCTC TTTTTTAATTTATAA TERM 568 482670 - 482701 + F 78 -4.4 -5.42514 | opp_overlap 482670 482672, overlap 482672 GACAAAATGATAAAA TAGGCTGAGACA TTTTATTT TGTCCCAGCCTC TTTTTTAATTTATAA TERM 569 482699 - 482672 - f 84 -9.2 -3.9392 | opp_overlap 482670 482672, overlap 482670 CAAAATGATAAAATA GGCTGAGACA TTTTATTT TGTCCCAGCC TCTTTTTTAATTTAT TERM 570 482672 - 482699 + F 76 -7 -4.33053 | opp_overlap 482672 482670, overlap 482670 CAAAATGATAAAATA GGCTGAGACA TTTTATTT TGTCCCAGCC TCTTTTTTAATTTAT SH0463 482789 - 483676 + | hypothetical protein TERM 571 483718 - 483765 + F 91 -11.6 -3.01712 | opp_overlap 483719 483725, overlap 483725 TAGATGATATATAAA TTTAAAAGCCAGTAAGTGAATT TTAT AATTCATCTGCTGGCTTTTAGG TATTGAGAAAAGGAA TERM 572 483764 - 483719 - f 73 -8.5 -3.09058 | opp_overlap 483718 483725, overlap 483725 AGATGATATATAAAT TTAAAAGCCAGTAAGTGAATT TTAT AATTCATCTGCTGGCTTTTAG GTATTGAGAAAAGGA TERM 573 483725 - 483758 + F 88 -9.7 -4.28254 | opp_overlap 483719 483725, overlap 483718 TATATAAATTTAAAA GCCAGTAAGTGAATT TTAT AATTCATCTGCTGGC TTTTAGGTATTGAGA TERM 574 483758 - 483725 - f 78 -7.5 -4.41177 | opp_overlap 483725 483718, overlap 483719 TATATAAATTTAAAA GCCAGTAAGTGAATT TTAT AATTCATCTGCTGGC TTTTAGGTATTGAGA SH0464 484166 - 484759 + | hypothetical protein TERM 575 484766 - 484797 + F 100 -9.6 -5.0925 | overlap 484796 AATAAATAATGTATG GCTTCTAATTACTG ATAT TAGTGATTAGGAGC TTTTTAATTTTAAAA SH0465 484965 - 485063 + | hypothetical protein TERM 576 485095 - 485061 - f 100 -15.4 -5.43621 | ATAAAGTATAAAAAA TAACGTTTTCTTAACT CGC AATTAAGAAAACGTTA GCCCAATAATAGAAA TERM 577 485510 - 485536 + G 79 -5.2 -5.08731 | opp_overlap 485518, overlap 485514 485516 ATGTTGTTCAACGTG TTAATGTACCGA CCA TCGGTATATTTG TTTTATTCTTTATTG TERM 578 485514 - 485532 + G 90 -8.2 -4.98461 | opp_overlap 485518, overlap 485510 485516 TGTTCAACGTGTTAA TGTACCGA CCA TCGGTATA TTTGTTTTATTCTTT TERM 579 485516 - 485530 + G 82 -8.6 -4.06214 | opp_overlap 485518, overlap 485514 485510 TTCAACGTGTTAATG TACCGA CCA TCGGTA TATTTGTTTTATTCT SH0466 485335 - 485589 + | hypothetical protein SH0467 485675 - 485848 + | hypothetical protein SH0468 485852 - 486355 + | hypothetical protein SH0469 486419 - 487135 + | hypothetical protein TERM 580 487140 - 487185 + T 100 -9.3 -4.79752 | opp_overlap 487142 487143, overlap 487142 487143 AGCAATTTTAAAGAA AATGACTCCTAATTTGAAG TTTAATCC TTTCAAATTAGGAGTCGTA TTTTATATTGTTCGA TERM 581 487183 - 487142 - T 95 -9 -4.90525 | opp_overlap 487140 487142 487143, overlap 487143 CAATTTTAAAGAAAA TGACTCCTAATTTGAA GTTTAATCCT TTCAAATTAGGAGTCG TATTTTATATTGTTC TERM 582 487142 - 487183 + T 100 -11.9 -4.00463 | opp_overlap 487142 487143, overlap 487140 487143 CAATTTTAAAGAAAA TGACTCCTAATTTGAAG TTTAATCC TTTCAAATTAGGAGTCG TATTTTATATTGTTC TERM 583 487143 - 487182 + T 100 -13.2 -2.98651 | opp_overlap 487142 487143, overlap 487142 487140 AATTTTAAAGAAAAT GACTCCTAATTTGAAG TTTAATCC TTTCAAATTAGGAGTC GTATTTTATATTGTT TERM 584 487182 - 487143 - T 95 -12.5 -3.5323 | opp_overlap 487143 487142 487140, overlap 487142 AATTTTAAAGAAAAT GACTCCTAATTTGAA GTTTAATCCT TTCAAATTAGGAGTC GTATTTTATATTGTT SH0470 487481 - 487188 - | hypothetical protein TERM 585 487257 - 487239 - G 79 -8.2 -4.06562 | opp_overlap 487239 487238 AATGGCAATCACAAA TGCAGATA GGA TACCTGCA ATTTTTAAACCTTTT SH0471 488621 - 487554 - | dihydroorotate dehydrogenase 2 TERM 586 488485 - 488500 + g 72 -6.2 -4.43844 | opp_overlap 488479 488485 TGTGTTAAAGAAGGA TCTTCA TAGT TGAAGA TTTTGTGCATAATAG SH0472 488852 - 489706 + | hypothetical protein TERM 587 489708 - 489761 + T 100 -15.6 -4.93547 | opp_overlap 489714 489717 AAATATTGGCGTAAT TAATAACTATGGGTGGTACAGGTA CAGTGA TACCGGTGCCACCCATGTTTATTA TTTTTCATTAATTGA TERM 588 489754 - 489714 - T 89 -9.8 -3.81146 | gap 1, opp_overlap 489708, overlap 489717 TGGCGTAATTAATAA CTATGGGTGGTACAGGTAC AGTG ATACCGGTGCCACCCAT-G TTTATTATTTTTCAT TERM 589 489752 - 489717 - T 100 -12.6 -2.98947 | opp_overlap 489708, overlap 489714 CGTAATTAATAACTA TGGGTGGTACAGGTAC AGTG ATACCGGTGCCACCCA TGTTTATTATTTTTC SH0473 490706 - 489759 - | hypothetical protein TERM 590 489884 - 489913 + g 76 -6.5 -4.46155 | opp_overlap 489892 TTACAACTTGATCTG TTGTATAAGGTGC ATCT GAACCATATACAA TTTTATCCATGTCTA SH0474 491345 - 490710 - | hypothetical protein SH0475 491725 - 491366 - | hypothetical protein TERM 591 491615 - 491629 + g 72 -2.8 -5.21709 | opp_overlap 491615, overlap 491617 TTTGAACCAACCCAA CATTTC ATC GAAACG TTTTTTACTGTCAGC SH0476 491911 - 492534 + | hypothetical protein TERM 592 492668 - 492654 - g 70 -2.1 -5.24551 | TGAAATTAATAAAAA TCCAG ATATG CTAGA CAAAATGGTTGGTAT SH0477 492562 - 492939 + | hypothetical protein TERM 593 492979 - 493020 + F 95 -11.1 -4.44448 | opp_overlap 492980 492982, overlap 492982 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 594 493019 - 492980 - f 100 -12.4 -4.07562 | opp_overlap 492979 492982, overlap 492982 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 595 492982 - 493017 + F 100 -17.2 -4.33281 | opp_overlap 492982 492980, overlap 492979 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 596 493017 - 492982 - f 100 -15 -3.62348 | opp_overlap 492979 492982, overlap 492980 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0478 492990 - 493139 + | hypothetical protein TERM 597 493355 - 493339 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 598 494109 - 494123 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 599 494851 - 494819 - g 90 -8 -5.35222 | opp_overlap 494819 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 600 494819 - 494851 + G 93 -8 -5.55698 | opp_overlap 494819 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 493223 - 494941 + | IS1272 transposase SH0480 495142 - 494906 - | hypothetical protein SH0481 496099 - 495155 - | hypothetical protein TERM 601 496301 - 496279 - R 100 -10.6 -5.60993 | opp_overlap 496279 TTTTCCATAAAAAAA CTTCCAAGGC AAT GCCTCAGAAG TTGAATTATAAGTGT SH0482 496873 - 496307 - | hypothetical protein SH0483 497186 - 497749 + | hypothetical protein TERM 602 497780 - 497801 + F 100 -9.5 -6.14618 | opp_overlap 497779 497780 GATATCATTACTAAT CTGAAGCAC AATT GTGTTTCAG TTTTTTTATTTTATA TERM 603 498398 - 498416 + G 74 -6 -4.51933 | GATTAATACGATGAT TACTGCAA CGA TTGCTGTA TTATTTATTTTATTA SH0484 498051 - 499109 + | hypothetical protein TERM 604 499125 - 499162 + F 100 -9.5 -5.03314 | gap 1, opp_overlap 499125 CCATTTGTTAAATAG GAATTGATAAAGTGTTGA TTA TCG-CATTTTATCAATTC TTTTTTGAAAATGAG SH0485 499265 - 500689 + | hypothetical protein TERM 605 500727 - 500760 + F 91 -8.3 -5.12474 | opp_overlap 500727 GGATGAATCATGGAA CCAAGAAACGATT GATTATAG AAACGTTTCTTGG TTTTTCTATGTTATA TERM 606 500760 - 500727 - f 70 -8.3 -3.14136 | opp_overlap 500727 GGATGAATCATGGAA CCAAGAAACGATT GATTATAG AAACGTTTCTTGG TTTTTCTATGTTATA SH0486 501142 - 501858 + | hypothetical protein TERM 607 501926 - 501903 - f 70 -8.1 -3.08133 | opp_overlap 501903, overlap 501905 GAGTTATCGAGGGAA GAGGTCGAC TTTAAG GTCGGCCTC TTTTTTGTGTTTTAA TERM 608 501903 - 501926 + F 100 -11 -5.63645 | opp_overlap 501903 501905 GAGTTATCGAGGGAA GAGGTCGACT TTAA GGTCGGCCTC TTTTTTGTGTTTTAA SH0487 502025 - 502540 + | hypothetical protein SH0488 502513 - 504021 + | hypothetical protein TERM 609 505016 - 505029 + G 70 -3.8 -4.91084 | TTTATTCGTTTACAT CGTC GAGTAG GACG TTTTTCAATTTTATT SH0489 504035 - 505162 + | hypothetical protein crtM 505183 - 506040 + | squalene desaturase crtN 506165 - 507556 + | squalene synthase TERM 610 507760 - 507795 + F 100 -12.8 -5.37593 | opp_overlap 507760 CATAGTCATAACTAA GCTATATGTCACTATC AATT GAGAGTGATATATAGC TTTTTTAATTTGAAA TERM 611 507795 - 507760 - f 88 -10.6 -3.46659 | opp_overlap 507760 CATAGTCATAACTAA GCTATATGTCACTATC AATT GAGAGTGATATATAGC TTTTTTAATTTGAAA SH0492 507823 - 508983 + | hypothetical protein TERM 612 509203 - 509221 + G 80 -10.4 -3.06315 | CGGAAGATGTATTTG CCAAATTG CAA CAATTTGG TATTAAACATATTGC TERM 613 509663 - 509677 + G 70 -4.3 -4.66535 | GAAATATAATCCACA TCTCT TCAAT AGAGA TTTATTTTCAAAATT SH0493 509016 - 510014 + | D-lactate dehydrogenase TERM 614 510078 - 510020 - f 95 -6.3 -5.64006 | gap 2, opp_overlap 510022, overlap 510023 AGTGAATTAAAAAAA TAAGAGTTGGGCATGGGACA--GAATTAT TTA AAAATTCAATGTCCCATACTCAACTCCTC ATATTTTGCCAGCAC TERM 615 510075 - 510023 - f 100 -10.2 -4.88485 | gap 2, opp_overlap 510022, overlap 510020 GAATTAAAAAAATAA GAGTTGGGCATGGGACA--GAATTAT TTA AAAATTCAATGTCCCATACTCAACTC CTCATATTTTGCCAG SH0494 510032 - 510127 + | hypothetical protein SH0495 510400 - 510185 - | hypothetical protein copA 512867 - 510480 - | copper-transporting ATPase copA SH0497 513279 - 513073 - | hypothetical protein SH0498 513513 - 514382 + | hypothetical protein TERM 616 514401 - 514435 + F 100 -11.6 -4.66537 | opp_overlap 514400 AAAATTTTAATGTAT TGAGCCATAAAGGTGT CTA GTGCCTTTATGGCTTA TTTTATGTTGGAAAA TERM 617 514557 - 514544 - g 74 -3.1 -5.38839 | GACAGAAAAAGAAAA GATGT TAGC ACACC AGTGGTATGATGCCA SH0499 514527 - 515105 + | hypothetical protein TERM 618 515466 - 515432 - g 73 -3.6 -5.10077 | overlap 515433 AAAGATTTCAAAAAA CGTTAGAGCAAGTTAA AAA TGAACTTGGTCAAACA CTTCCAATTGTGATT rocA 515359 - 516903 + | 1-pyrroline-5-carboxylate dehydrogenase TERM 619 516962 - 517002 + F 100 -9.3 -5.38326 | opp_overlap 516962 516965, overlap 516965 AACATTTCTAAATAA TTAGTCAGTAAATGAGT ATAGTCC ATTCATTTACTGACTTA TTTTTATTTCATTAA TERM 620 517002 - 516962 - f 75 -7.8 -3.93658 | opp_overlap 516962 516965, overlap 516965 AACATTTCTAAATAA TTAGTCAGTAAATGAGTA TAGTC CATTCATTTACTGACTTA TTTTTATTTCATTAA TERM 621 516965 - 516999 + F 100 -11 -4.74052 | opp_overlap 516962 516965, overlap 516962 ATTTCTAAATAATTA GTCAGTAAATGAGT ATAGTCC ATTCATTTACTGAC TTATTTTTATTTCAT TERM 622 516999 - 516965 - f 78 -9.5 -3.02639 | opp_overlap 516965 516962, overlap 516962 ATTTCTAAATAATTA GTCAGTAAATGAGTA TAGTC CATTCATTTACTGAC TTATTTTTATTTCAT TERM 623 517255 - 517285 + F 100 -14.2 -5.20783 | opp_overlap 517255 GGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 624 517285 - 517255 - f 100 -16.4 -4.30719 | opp_overlap 517255 GGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 625 517428 - 517414 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 626 518659 - 518691 + G 81 -10.7 -2.63089 | opp_overlap 518660, overlap 518658 518656 GTCAACAACAAAAAA AGAGATTAAACAACC TAA GGTTGCTTAATCTCA ATATTTGGACTCATC TERM 627 518690 - 518660 - g 100 -16.4 -5.95946 | opp_overlap 518659 518658 518656 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTTGGACTCAT tnp 517370 - 518686 + | transposase for ISSha1 TERM 628 518771 - 518735 - T 93 -9 -4.70169 | opp_overlap 518735 518738 GTAGAGCCAATAAAA GAAGCAAATTCTAT ATAATTTCA ATAGAATCTGCTTC TCACTTATCTAAGAA SH0502 519284 - 518838 - | hypothetical protein TERM 629 519395 - 519380 - R 70 -4.8 -4.6635 | opp_overlap 519380 519382 519385, overlap 519385 AAACTTTGAACAAAA TAGAAT GATT ATTCTA ATTAATCATGTGCTT SH0503 519945 - 519397 - | hypothetical protein SH0504 520257 - 520727 + | hypothetical protein SH0505 520903 - 521853 + | hypothetical protein TERM 630 521863 - 521905 + T 79 -9.3 -3.1917 | opp_overlap 521865 521868, overlap 521865 521868 TTCTAACGCAAACTA AATAAGCGTATGATTCTAC AAATG GTAGATTCACACGCTTATA TCTATTAATGTTGCT TERM 631 521865 - 521903 + T 95 -11.9 -3.14978 | opp_overlap 521865 521868, overlap 521863 521868 CTAACGCAAACTAAA TAAGCGTATGATTCTAC AAATG GTAGATTCACACGCTTA TATCTATTAATGTTG TERM 632 521903 - 521865 - T 100 -14.1 -4.10672 | opp_overlap 521865 521863 521868, overlap 521868 CTAACGCAAACTAAA TAAGCGTATGATTCTAC AAATG GTAGATTCACACGCTTA TATCTATTAATGTTG TERM 633 521868 - 521900 + T 80 -9.2 -3.70033 | opp_overlap 521868 521865, overlap 521865 521863 ACGCAAACTAAATAA GCGTATGATTCTAC AAATG GTAGATTCACACGC TTATATCTATTAATG TERM 634 521900 - 521868 - T 95 -11.4 -4.15998 | opp_overlap 521865 521863 521868, overlap 521865 ACGCAAACTAAATAA GCGTATGATTCTAC AAATG GTAGATTCACACGC TTATATCTATTAATG SH0506 522227 - 521910 - | hypothetical protein SH0507 522318 - 522839 + | hypothetical protein TERM 635 522865 - 522911 + T 100 -13.2 -3.43071 | opp_overlap 522865 TTACACGTAAATAAA GAGGCGTTCGAGATAAGAGC CTAAATT GCCCTTATTTTGAATGCCTC TTAATTAATATCAAC TERM 636 522911 - 522865 - T 83 -8.8 -4.48299 | opp_overlap 522865 TTACACGTAAATAAA GAGGCGTTCGAGATAAGAGC CTAAATT GCCCTTATTTTGAATGCCTC TTAATTAATATCAAC mvaS 524094 - 522928 - | HMG-CoA synthase TERM 637 523451 - 523473 + g 70 -7.1 -3.89212 | TCACGTCGAGCATAT TCGTTCCAA CTTTC TTGGAATGA TTTGATATATGCATC SH0509 524274 - 524161 - | hypothetical protein mvaC 524389 - 525540 + | acetyl-CoA acetyltransferase mvaA 525545 - 526822 + | HMG-CoA reductase TERM 638 526891 - 526837 - T 70 -5.3 -4.47873 | opp_overlap 526837 ACAATATTTAGAAAA GCCACTAATTACGAGT-AAGGTTCTTA AAT CAAG-ACCTCGATTCATAAGTAGTGGC TTTTATTTATCATTT SH0512 527358 - 526924 - | hypothetical protein TERM 639 527623 - 527609 - R 90 -8.5 -4.78237 | opp_overlap 527609 TACCCTATAATAAAA GCGCC ATAAA GGCGC TTGGTGAGATGATAC TERM 640 527609 - 527623 + r 74 -8.5 -3.17212 | opp_overlap 527609 TACCCTATAATAAAA GCGCC ATAAA GGCGC TTGGTGAGATGATAC SH0513 527883 - 527668 - | hypothetical protein SH0514 528127 - 528960 + | hypothetical protein TERM 641 529032 - 529073 + F 86 -8.9 -4.44448 | opp_overlap 529033 529035, overlap 529035 ATAAACATTAGAGAA ATAGCCAGTAAATGGGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 642 529072 - 529033 - f 80 -8 -4.15197 | opp_overlap 529032 529035, overlap 529035 TAAACATTAGAGAAA TAGCCAGTAAATGGGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 643 529070 - 529035 - f 88 -10.6 -3.65604 | opp_overlap 529032 529035, overlap 529033 AACATTAGAGAAATA GCCAGTAAATGGGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 644 529035 - 529070 + F 100 -15 -4.33281 | opp_overlap 529035 529033, overlap 529032 AACATTAGAGAAATA GCCAGTAAATGGGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0515 529043 - 529192 + | hypothetical protein TERM 645 529408 - 529392 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 646 530162 - 530176 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 647 530872 - 530904 + G 93 -8 -5.55698 | opp_overlap 530872 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 648 530904 - 530872 - g 90 -8 -5.35222 | opp_overlap 530872 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 529276 - 531033 + | IS1272 transposase SH0517 531097 - 531546 + | hypothetical protein SH0518 531548 - 532234 + | hypothetical protein TERM 649 532916 - 532900 - g 79 -3.7 -5.50313 | GATAAAAGTAAAAAA CCAGTAA TGA TTATTGG TGTAGGTGCACAAAA SH0519 532285 - 534024 + | pyruvate oxidase TERM 650 534040 - 534068 + F 100 -19.1 -5.65177 | opp_overlap 534033 534042 GAAATAGATTCGACA CACTGACAAAAGC AAT GCTTTTGTCAGTG TTTTTTTATGAATAT TERM 651 534066 - 534042 - f 100 -15.9 -2.91507 | opp_overlap 534040, overlap 534033 AATAGATTCGACACA CTGACAAAAGC AAT GCTTTTGTCAG TGTTTTTTTATGAAT TERM 652 534130 - 534100 - f 100 -16.4 -4.30719 | opp_overlap 534100 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 653 534100 - 534130 + F 100 -14.2 -5.20783 | opp_overlap 534100 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 654 534273 - 534259 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 655 535504 - 535536 + G 81 -10.7 -2.63089 | opp_overlap 535505, overlap 535503 535501 CTCAACAACAAAAAA AGAGATTAAACAACC TAA GGTTGCTTAATCTCA ATATTTGGACTCATC TERM 656 535535 - 535505 - g 100 -16.4 -5.95946 | opp_overlap 535504 535503 535501 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTTGGACTCAT tnp 534215 - 535531 + | transposase for ISSha1 TERM 657 535688 - 535746 + F 95 -8.7 -5.1675 | gap 2 TTACTATTCGATTAG GCATGAGCAGATAAGCT-ATCAT-TAT TTTTGTC ATAAATGATGAGCTTATTTGGTCATGC TTTTTTAATGCGTAA TERM 658 536181 - 536197 + G 70 -7.3 -3.77607 | TTTTAGGCATACCTA CACTTCA AAC TGGAGTG TTTGGTGGGATTATT TERM 659 536871 - 536889 + G 70 -2.4 -5.27476 | ATCTAGGATATACAT TCTCTGGA GGA TTCATAGA TTTTGTTTTATTAGG TERM 660 537131 - 537109 - g 73 -4.3 -4.86731 | gap 1, opp_overlap 537112 537115, overlap 537111 537112 GGGCGGTAAAGAAAA TATCAAGCAT TTAG ATGCTTG-TA TTACGCGTTTACGTG TERM 661 537112 - 537129 + G 71 -8.5 -3.0806 | opp_overlap 537111 537109 537112, overlap 537115 CGGTAAAGAAAATAT CAAGCAT TTAG ATGCTTG TATTACGCGTTTACG TERM 662 537129 - 537112 - g 71 -8.5 -3.02684 | opp_overlap 537112 537115, overlap 537111 537109 CGGTAAAGAAAATAT CAAGCAT TTAG ATGCTTG TATTACGCGTTTACG ptsG 535790 - 537817 + | phosphotransferase system enzyme II TERM 663 537818 - 537860 + T 100 -18.8 -3.07895 | opp_overlap 537818 537823, overlap 537823 ATGACAATTAAATAA TAAAACAAGCCTGGGACA ACATATG TGTCTCAGGCTTGTTTTA TGTGTTGGCAGTCGA TERM 664 537860 - 537818 - T 100 -16.6 -4.12899 | opp_overlap 537818 537823, overlap 537823 ATGACAATTAAATAA TAAAACAAGCCTGGGACA ACATATG TGTCTCAGGCTTGTTTTA TGTGTTGGCAGTCGA TERM 665 537855 - 537823 - T 100 -12.1 -5.03961 | opp_overlap 537818 537823, overlap 537818 AATTAAATAATAAAA CAAGCCTGGGACA ACATATG TGTCTCAGGCTTG TTTTATGTGTTGGCA TERM 666 537823 - 537855 + T 100 -14.3 -4.67943 | opp_overlap 537823 537818, overlap 537818 AATTAAATAATAAAA CAAGCCTGGGACA ACATATG TGTCTCAGGCTTG TTTTATGTGTTGGCA SH0522 539044 - 537992 - | alcohol dehydrogenase, zinc-containing TERM 667 538106 - 538122 + g 70 -4.5 -4.67038 | opp_overlap 538106 ATAATGTGTAACCAA TTGTTCA GGT TGAATAA TTTTACTTTTCAAAG SH0523 539247 - 539627 + | hypothetical protein SH0524 539672 - 540004 + | hypothetical protein SH0525 541072 - 540116 - | hypothetical protein SH0526 541236 - 542207 + | hypothetical protein SH0527 542605 - 542318 - | hypothetical protein SH0528 542720 - 542887 + | AraC/XylS family transcriptional regulator SH0529 542914 - 543603 + | hypothetical protein TERM 668 543645 - 543605 - T 81 -7.1 -4.6951 | gap 2, opp_overlap 543605 543643 AGTATTTAAAATAAA GTAGGTGCATAGTGTCATC AATCA GATGAG-CT-TGCACCTAC TTTTTCAGTATCTGT TERM 669 543605 - 543645 + T 100 -9.3 -4.73448 | gap 2, opp_overlap 543605, overlap 543643 AGTATTTAAAATAAA GTAGGTGCATAGTGTCATC AATCA GATGA-GCT-TGCACCTAC TTTTTCAGTATCTGT SH0530 543921 - 543622 - | hypothetical protein pgsB 544349 - 545506 + | poly-gamma-glutamate synthesis protein PgsB pgsC 545508 - 545960 + | poly-gamma-glutamate synthesis protein PgsC TERM 670 546054 - 546032 - gf 70 -7.8 -3.37344 | opp_overlap 546032, overlap 546038 TGGTTACTTAAGCAA TCGAAACGTC ACA AACGTTTCAA TTTTAGCTATACACT pgsA 545984 - 547057 + | poly-gamma-glutamate synthesis protein PgsA SH0534 547032 - 547208 + | hypothetical protein TERM 671 547811 - 547801 - g 71 -5.4 -4.54727 | TTCTTCAAAGGAAAA CGTA CAG TACG TGAAGGCGATGTAGT SH0535 547210 - 548805 + | hypothetical protein TERM 672 548839 - 548867 + F 100 -9.7 -5.07275 | AAGGTTTAATTATGA GGTTGGGACAA AAATAAA TTGTCTCAACC TTTTTCTATATATGC TERM 673 549743 - 549719 - g 80 -9.3 -3.56325 | opp_overlap 549724 549730, overlap 549722 549738 CGTTCAGAATTAGAA CAAGAGCTTGG TTT CAAAGCTCCTG TGAAGGTTTATGCTG TERM 674 549740 - 549722 - g 76 -7.4 -3.91357 | opp_overlap 549724 549730, overlap 549719 549738 TCAGAATTAGAACAA GAGCTTGG TTT CAAAGCTC CTGTGAAGGTTTATG xylB 549062 - 550549 + | xylulose kinase TERM 675 550558 - 550595 + F 100 -15.9 -3.03243 | opp_overlap 550558 550561 550565, overlap 550561 550565 AGATTAATTCAATGA TAATAAACTGGAGCAGC AATG GTTGTTCCAGTTTATTA TGTTAAAAACTAAAT TERM 676 550595 - 550558 - f 89 -11.5 -2.79952 | opp_overlap 550558 550561 550565, overlap 550561 550565 AGATTAATTCAATGA TAATAAACTGGAGCAGC AATG GTTGTTCCAGTTTATTA TGTTAAAAACTAAAT TERM 677 550592 - 550561 - f 76 -8.8 -3.54109 | opp_overlap 550558 550561 550565, overlap 550558 550565 TTAATTCAATGATAA TAAACTGGAGCAGC AATG GTTGTTCCAGTTTA TTATGTTAAAAACTA TERM 678 550561 - 550592 + F 100 -13.2 -3.66288 | opp_overlap 550561 550558 550565, overlap 550558 550565 TTAATTCAATGATAA TAAACTGGAGCAGC AATG GTTGTTCCAGTTTA TTATGTTAAAAACTA TERM 679 550565 - 550588 + F 90 -9.6 -4.46073 | opp_overlap 550565 550561 550558, overlap 550561 550558 TTCAATGATAATAAA CTGGAGCAGC AATG GTTGTTCCAG TTTATTATGTTAAAA SH0537 551010 - 552008 + | hypothetical protein SH0538 552011 - 552697 + | hypothetical protein TERM 680 553066 - 553086 + G 71 -7.5 -3.59372 | overlap 553065 CTCCAACAGCTGGAT CCTCCGGAA CGA TTCCGGGCG TATTATTTAAATTAG SH0539 552711 - 553607 + | hypothetical protein TERM 681 553625 - 553661 + F 100 -14.7 -5.22794 | opp_overlap 553619 553625 TAATTGAAATTAGAA GCCATTCTTGAATGTCA ATA TAACATTTAAGAATGGC TTTTTTAATACTTAT TERM 682 553661 - 553625 - f 100 -14.7 -3.6268 | opp_overlap 553625, overlap 553619 TAATTGAAATTAGAA GCCATTCTTGAATGTCA ATA TAACATTTAAGAATGGC TTTTTTAATACTTAT TERM 683 553819 - 553799 - g 81 -9.7 -3.41978 | CTACAAGCTAAGCAA GCTGGGG TTTGGGG CCCCAGC AAAGAGAATTTTATA SH0540 553632 - 553835 + | hypothetical protein SH0541 553991 - 554251 + | hypothetical protein TERM 684 554235 - 554271 + T 100 -15.5 -4.11183 | opp_overlap 554235 554240, overlap 554240 AAAAAGACGATAAAA GAAAAGTAAGTGAGT AAAAGGG ACTCACTTACTTTTC TTATTTGTCATGCAA TERM 685 554271 - 554235 - T 100 -15.5 -4.62069 | opp_overlap 554235 554240, overlap 554240 AAAAAGACGATAAAA GAAAAGTAAGTGAGT AAAAGGG ACTCACTTACTTTTC TTATTTGTCATGCAA TERM 686 554240 - 554266 + T 100 -9.6 -5.05116 | opp_overlap 554235 554240, overlap 554235 GACGATAAAAGAAAA GTAAGTGAGT AAAAGGG ACTCACTTAC TTTTCTTATTTGTCA TERM 687 554266 - 554240 - T 100 -9.6 -5.20781 | opp_overlap 554240 554235, overlap 554235 GACGATAAAAGAAAA GTAAGTGAGT AAAAGGG ACTCACTTAC TTTTCTTATTTGTCA SH0542 554766 - 554272 - | hypothetical protein srtA 554925 - 555527 + | sortase A TERM 688 555562 - 555519 - f 100 -13 -3.90744 | gap 1, opp_overlap 555529, overlap 555529 TTTGTGGCGAAACAA GTTAATTAAATGTATTTTCAA AAT TTGAAA-TACATCTAATTAAC CCAAAACGTTCCATA TERM 689 555603 - 555637 + F 100 -10.2 -5.72207 | opp_overlap 555612 ATTAAGTCATCAGGA GTGATACTAGATATCT AAT ATATATCTTGTATCAC TTTTTTTAATTTAAC SH0544 555794 - 556591 + | hypothetical protein TERM 690 556599 - 556630 + T 100 -13.2 -4.67607 | opp_overlap 556601, overlap 556601 TAAAATAGCTTAAAA AAGGAGAATTCTCA ATTT TGAGAATTCTCCTG TTTATTTATTAAACA TERM 691 556601 - 556628 + T 100 -15.8 -3.94772 | opp_overlap 556601, overlap 556599 AAATAGCTTAAAAAA GGAGAATTCTCA ATTT TGAGAATTCTCC TGTTTATTTATTAAA TERM 692 556628 - 556601 - T 100 -15.8 -5.10077 | opp_overlap 556601 556599 AAATAGCTTAAAAAA GGAGAATTCTCA ATTT TGAGAATTCTCC TGTTTATTTATTAAA ddh 557644 - 556652 - | D-lactate dehydrogenase SH0546 557963 - 558619 + | NAD(P)H-flavin oxidoreductase TERM 693 558628 - 558658 + F 71 -7.9 -3.60792 | gap 1, opp_overlap 558627 558635, overlap 558635 GATTTAATATAGGAC TAAAAAA-GAGAGT GAAG ACTCTCTTTTTTTA TTATCTATAAGTGAT TERM 694 558650 - 558635 - f 91 -7.6 -5.20216 | opp_overlap 558635 558628, overlap 558627 TATAGGACTAAAAAA GAGAGT GAAG ACTCTC TTTTTTTATTATCTA TERM 695 558635 - 558650 + F 100 -7.6 -5.9218 | opp_overlap 558627 558635, overlap 558628 TATAGGACTAAAAAA GAGAGT GAAG ACTCTC TTTTTTTATTATCTA TERM 696 559001 - 558983 - g 71 -9 -3.06261 | TGCGAATGGTGAAGA TTTAGCTA AAG TAGCTAAA GCAAGTAAATCTGAT aldA 558861 - 560354 + | hypothetical protein TERM 697 560440 - 560399 - f 79 -9.5 -3.29591 | opp_overlap 560402, overlap 560385 560394 560402 560404 ATCATTTAAATTGAA TGAGAGCTATCTGCAAAGC TGAG ACTTTGCAGGTAGCTCTTT TTATGAGTTTAAAAG TERM 698 560437 - 560402 - f 100 -15.6 -2.82156 | opp_overlap 560402, overlap 560399 560394 560404 ATTTAAATTGAATGA GAGCTATCTGCAAAGC TGAG ACTTTGCAGGTAGCTC TTTTTATGAGTTTAA TERM 699 560402 - 560437 + F 100 -17.1 -4.94992 | opp_overlap 560399 560394 560402 560404 ATTTAAATTGAATGA GAGCTATCTGCAAAG CTGAGA CTTTGCAGGTAGCTC TTTTTATGAGTTTAA TERM 700 560435 - 560404 - f 93 -12.4 -2.95448 | opp_overlap 560402, overlap 560402 560399 560394 TTAAATTGAATGAGA GCTATCTGCAAAGC TGAG ACTTTGCAGGTAGC TCTTTTTATGAGTTT SH0548 560596 - 561504 + | hypothetical protein TERM 701 561561 - 561519 - T 95 -12.3 -3.41203 | gap 2, overlap 561513 AAAATTTAAGATTAA GGGAGTGGGAC-A-GAATTCT TTT AAAATTCGTCGTCCCACCCCC GCAAGGATGACTAGA TERM 702 561617 - 561569 - T 84 -10.7 -2.71364 | overlap 561578 561587 CCACCCCCGCAAGGA TGACTAGAACTGAGAAAA-GCTT GATTT AAGCGCCTTCTCAGTTC-AGTCA GCTACTGCGAATTTG TERM 703 561751 - 561807 + T 81 -10.4 -2.55297 | gap 1, overlap 561750 AAGTCAAACTTGTTG TCGGGGCAGGACCACGAAATAA-ATTT TGGA AAATATTATTTCGTAGTCCCACCCCCA ATCTATTTAAAATGA SH0549 562663 - 561857 - | hypothetical protein TERM 704 562526 - 562543 + g 71 -6.3 -4.15884 | opp_overlap 562526 562529 AGCACCAACATTAAA GATGACA TGAT TGTCGTC TTGTTCTTTAATTGA TERM 705 562681 - 562695 + r 71 -4.3 -4.82212 | TGTAGTGCCTCCTAA GATGA ATAAG TCATC TTTATTTATTATTTA SH0550 563184 - 562903 - | hypothetical protein SH0551 563358 - 564320 + | hypothetical protein TERM 706 564357 - 564325 - T 95 -5.7 -5.80003 | gap 1, opp_overlap 564325 TGAATAAATAAAAAA TATCCCCA-ATCCT TTTATT AGGAGATGGGGATA TTTTTATACCAATTT TERM 707 564325 - 564357 + T 78 -5.7 -4.86033 | gap 1, opp_overlap 564325 TGAATAAATAAAAAA TATCCCCA-ATCCT TTTATT AGGAGATGGGGATA TTTTTATACCAATTT SH0552 565798 - 564371 - | hypothetical protein SH0553 565976 - 566410 + | hypothetical protein TERM 708 566459 - 566438 - f 70 -6.7 -4.00868 | overlap 566433 TTATTTATAACGAAA TTTATCTCG AAAT CGAAATAAA TGGAGGTTTTTAATA SH0554 566474 - 567442 + | hypothetical protein SH0555 567458 - 568363 + | hypothetical protein SH0556 568379 - 568972 + | hypothetical protein TERM 709 568979 - 569015 + T 81 -8.1 -4.40237 | opp_overlap 568980, overlap 568980 569009 AATTCATAATGGAAA AGGACTCAAAGATGT ATGGTTC GCATCTTTGGGTCCA TTTTAATGTATCCTA TERM 710 569014 - 568980 - T 83 -8.7 -4.32482 | opp_overlap 568980 568979 569009 ATTCATAATGGAAAA GGACTCAAAGATG TATGGTTCG CATCTTTGGGTCC ATTTTAATGTATCCT TERM 711 568980 - 569014 + T 93 -11.6 -3.23419 | opp_overlap 568980, overlap 568979 569009 ATTCATAATGGAAAA GGACTCAAAGATGT ATGGTTC GCATCTTTGGGTCC ATTTTAATGTATCCT SH0557 570094 - 569033 - | hypothetical protein TERM 712 570827 - 570839 + G 75 -4.8 -4.84918 | AATAGGACCGATACT CGCA TTAAC TGCG TTTTATGTTTATCAA SH0558 570324 - 572105 + | hypothetical protein TERM 713 572156 - 572122 - T 100 -13 -4.25437 | opp_overlap 572122, overlap 572110 AAAGTAATATATAAA TGGCACTTTCTATTTC AGT GATTTAGAAAGTGCCA TTTTTTTATATGTGT TERM 714 572122 - 572156 + T 100 -13 -5.77988 | opp_overlap 572122 572110 AAAGTAATATATAAA TGGCACTTTCTATTTC AGT GATTTAGAAAGTGCCA TTTTTTTATATGTGT fbp 574155 - 572191 - | fructose-bisphosphatase TERM 715 573647 - 573657 + g 84 -4 -5.64873 | TGATTCACGAGTGTT TCAT AGT ATGA TTTTTTATTGTTGAA TERM 716 573826 - 573838 + g 74 -6.3 -4.40963 | TACATTTAATTTACC CTTTG AAT CAAAG TTGTTTTTCACAAGT TERM 717 574332 - 574306 - R 71 -2.8 -5.4833 | opp_overlap 574306 CTATTTAATAAAAAA GCCTCAGTCACC AAT GAATTCTGAGGC TTTCACGTATTACTT SH0560 574956 - 574342 - | hypothetical protein TERM 718 575043 - 575007 - R 95 -9.2 -4.98531 | gap 1, opp_overlap 575003 575007 TTGTGAAATTAAAAA TTCATAGTAAATTT-AT TATA ATAAAATTTACTATGAA TTGCTTGTATAAACC TERM 719 575007 - 575043 + r 79 -9.2 -3.49618 | gap 1, opp_overlap 575007, overlap 575003 TTGTGAAATTAAAAA TTCATAGTAAATTT-AT TATA ATAAAATTTACTATGAA TTGCTTGTATAAACC SH0561 575936 - 575070 - | hypothetical protein TERM 720 575353 - 575364 + g 70 -4.4 -4.72846 | TGATTCGCACATATC TCAC ACGC GTGA TTTTTCAATATATCG thiG 576835 - 576068 - | thiazole synthase SH0563 577037 - 576837 - | hypothetical protein SH0564 578136 - 577021 - | hypothetical protein TERM 721 577152 - 577140 - G 70 -4.1 -4.78237 | overlap 577128 CAGGGGACAATAAAA TACCG TTC CGATA ATGGCCGGTAATGAC SH0565 578722 - 578129 - | hypothetical protein TERM 722 578766 - 578741 - H 100 -12.7 -5.46129 | opp_overlap 578741 TAATAAATGAAAAAA CGCTATCTCCT TCGT AGGAAATAGCG TTAGTCTCTATGTAA TERM 723 578741 - 578766 + H 88 -10.5 -3.36655 | opp_overlap 578741 TAATAAATGAAAAAA CGCTATCTCCT TCGT AGGAAATAGCG TTAGTCTCTATGTAA SH0566 579310 - 580512 + | hypothetical protein TERM 724 580548 - 580583 + F 91 -9.9 -4.09923 | opp_overlap 580548 CATTCCTAGAATCTA GCCAGTAAGTGGGTT TTAATT AATTCATTTACTGGC TTATTTAATTACATT SH0567 580754 - 581038 + | hypothetical protein TERM 725 581117 - 581073 - f 86 -10.4 -3.27661 | gap 2, opp_overlap 581073, overlap 581087 AATATACATTACTAA GGTAGGATTTGAAATCTATGTC ACA GATAT-GATTTCA-ATCCTACC TTTTTGTAAATTAGA TERM 726 581073 - 581117 + F 100 -12.6 -4.91712 | gap 2, opp_overlap 581073 581087 AATATACATTACTAA GGTAGGATTTGAAATCTATGTC ACA GATAT-GATTTCAA-TCCTACC TTTTTGTAAATTAGA SH0568 581206 - 583143 + | hypothetical protein SH0569 583215 - 583634 + | hypothetical protein TERM 727 583643 - 583688 + F 100 -13.7 -4.93365 | gap 1 ATCATAATTAGTAGT TGCAAACCTTTATGTCTGGACG CAT TGTTCA-ATATAAAGGTTTGCA TTTTTAATTATAAAA SH0570 583799 - 584497 + | hypothetical protein TERM 728 584513 - 584562 + F 73 -3.1 -5.38497 | gap 1 AACGATTAGTTTAAA GTATAACTTGATGAATTGTACGTA ACT TGCA-ACAATTCTATAAGTTATAC TTTTTTAATTTGCCT SH0571 584640 - 585515 + | hypothetical protein TERM 729 585556 - 585584 + F 76 -8.1 -3.70902 | opp_overlap 585555, overlap 585559 TATATGTAAAAATGT CTTGCTCGTGACG TAG CGTCATGAGGTAG TTTCAATGTAGGAGG TERM 730 585559 - 585581 + F 73 -8.4 -2.95942 | opp_overlap 585555, overlap 585556 ATGTAAAAATGTCTT GCTCGTGACG TAG CGTCATGAGG TAGTTTCAATGTAGG SH0572 585608 - 586330 + | hypothetical protein TERM 731 586349 - 586369 + F 100 -9 -5.24449 | gap 1 TTCAATCATGGTTTT CCCGGTCCA TCTG TGG-CCGGG TTTTTTAAATTTATA SH0573 586397 - 586456 + | hypothetical protein gntR 586468 - 587148 + | gluconate operon transcriptional repressor gntK 587170 - 588708 + | gluconokinase gntP 588749 - 590107 + | gluconate permease TERM 732 590134 - 590151 + G 100 -7 -5.7946 | opp_overlap 590134 AATGCAAAATGTAAA GCCACT CCAACA AGTGGC TTTTTTTATTAACAC TERM 733 590151 - 590134 - g 76 -7.7 -3.94333 | opp_overlap 590134 AATGCAAAATGTAAA GCCACTC CAAC AAGTGGC TTTTTTTATTAACAC SH0577 590120 - 590212 + | hypothetical protein SH0578 590273 - 590545 + | hypothetical protein gtaB 590833 - 591699 + | UTP-glucose-1-phosphate uridyltransferase TERM 734 591762 - 591718 - f 88 -9.5 -4.40652 | opp_overlap 591715, overlap 591715 591720 AATGATACAAAAGAA GACCCCATAGACACTTAAG TGATCAG CTTAAATGTTTATGGGGTT CAACTTTGATGTGAA TERM 735 591760 - 591720 - f 95 -12.1 -3.78861 | opp_overlap 591715, overlap 591718 591715 TGATACAAAAGAAGA CCCCATAGACACTTAAG TGATCAG CTTAAATGTTTATGGGG TTCAACTTTGATGTG TERM 736 592277 - 592243 - f 81 -7.3 -4.67048 | gap 1 TTATTGTAAAAGAAA GAGACCCATCTT-ACT CTCC AGTTAAGATGCGCCTC TAACGAATTTTATCA TERM 737 593574 - 593550 - g 75 -8 -3.72453 | gap 1 AGGAAGAATGGGAAA GTT-CTGAAGG GTAT CCTTCAGCAAC CTGGCATAACTTCTT shlAIR 592544 - 594016 + | hypothetical protein TERM 738 594053 - 594086 + F 93 -11.9 -2.79183 | opp_overlap 594056 594062, overlap 594056 594062 GTTTTGAAATTAACT ATACAAAAAGCGAAC GATC GTTCGCTTTTTGTGG TATAATCAGAATAAG TERM 739 594056 - 594083 + F 100 -15.8 -2.66435 | opp_overlap 594056 594062, overlap 594053 594062 TTGAAATTAACTATA CAAAAAGCGAAC GATC GTTCGCTTTTTG TGGTATAATCAGAAT TERM 740 594083 - 594056 - f 100 -15.8 -2.99596 | opp_overlap 594056 594053 594062, overlap 594062 TTGAAATTAACTATA CAAAAAGCGAAC GATC GTTCGCTTTTTG TGGTATAATCAGAAT TERM 741 594062 - 594077 + F 95 -9 -4.95758 | opp_overlap 594056 594062, overlap 594056 594053 TTAACTATACAAAAA GCGAAC GATC GTTCGC TTTTTGTGGTATAAT TERM 742 594077 - 594062 - f 95 -9 -5.04175 | opp_overlap 594062 594056 594053, overlap 594056 TTAACTATACAAAAA GCGAAC GATC GTTCGC TTTTTGTGGTATAAT shlA1M 594122 - 595360 + | hypothetical protein TERM 743 595362 - 595385 + F 100 -9 -5.2696 | opp_overlap 595362 TAAAATTATTTTAAA GACAATACTT AGAC AAGTGTTGTC TTTTTTGCGTTTTAA SH0582 595460 - 596155 + | hypothetical protein SH0583 596505 - 596696 + | hypothetical protein TERM 744 596838 - 596811 - T 95 -12.2 -3.56366 | gap 1, opp_overlap 596811 596803 596801 AATAATGTGTTGAAA GCCCGTATCT-TA CCA TAGAGATACGGGC TTCAGTGTATTATAA TERM 745 596811 - 596838 + T 95 -12.2 -3.20633 | gap 1, opp_overlap 596811, overlap 596803 596801 AATAATGTGTTGAAA GCCCGTATCT-TA CCA TAGAGATACGGGC TTCAGTGTATTATAA SH0584 597114 - 596848 - | hypothetical protein SH0585 597303 - 597998 + | hypothetical protein argE 598116 - 599348 + | acetylornithine deacetylase TERM 746 599366 - 599395 + T 100 -10.8 -4.74989 | opp_overlap 599368, overlap 599368 TTGTTTACAAAAATA AAGGCAATGGTC ATGAGC GACCATTGCCTA TTTTATATGTTATTT TERM 747 599368 - 599393 + T 100 -13.4 -3.95858 | opp_overlap 599368, overlap 599366 GTTTACAAAAATAAA GGCAATGGTC ATGAGC GACCATTGCC TATTTTATATGTTAT TERM 748 599393 - 599368 - T 100 -14.1 -4.96501 | opp_overlap 599368 599366 GTTTACAAAAATAAA GGCAATGGTCA TGAG CGACCATTGCC TATTTTATATGTTAT ppk 601570 - 599405 - | polyphosphate kinase TERM 749 599835 - 599848 + g 79 -8.1 -4.07687 | ATATTCTCACTTATA CCAGG AATA CCTGG TTTTAAGCAACAGAT gppA 603208 - 601667 - | Ppx-GppA, Ppx/GppA phosphatase family protein TERM 750 602809 - 602819 + g 74 -6.8 -4.36595 | opp_overlap 602796 CACCACCGATGTCGA CGGA TAC TCCG TTTTCAATTTCAGTA TERM 751 603381 - 603353 - R 100 -13.3 -5.00895 | opp_overlap 603357, overlap 603357 GGGATTACACAAAAA TAAACCTCCTCGA AGA TAGAGGAGGTTTA TGTACATATCTAGTA TERM 752 603377 - 603357 - R 100 -9.7 -5.01422 | opp_overlap 603357, overlap 603353 TTACACAAAAATAAA CCTCCTCGA AGA TAGAGGAGG TTTATGTACATATCT TERM 753 603357 - 603377 + r 88 -9.7 -4.0827 | opp_overlap 603353 603357 TTACACAAAAATAAA CCTCCTCGA AGA TAGAGGAGG TTTATGTACATATCT SH0589 604965 - 603421 - | hypothetical protein TERM 754 603535 - 603557 + g 78 -7.8 -4.08644 | opp_overlap 603534 603533 603541, overlap 603534 GTATGGCATTAAACT TGAAAGTAGG GAA CCTAGTTTCA TATTTTTATCATACT TERM 755 604884 - 604901 + g 75 -8.5 -3.33922 | overlap 604883 AAAGCATTGCAGGGT CTGGTAA TTTA TTACCAG CTTTTTCAACACCAT SH0590 605235 - 606053 + | short chain dehydrogenase TERM 756 606126 - 606101 - T 100 -13.4 -3.52341 | opp_overlap 606101, overlap 606087 AGGTTAATATTATAA CCCCAGTCTA TGACGG TAGACTGGGG TTTAGTGACGTCAAA TERM 757 606101 - 606126 + T 100 -14.1 -3.74693 | opp_overlap 606087 606101 AGGTTAATATTATAA CCCCAGTCTAT GACG GTAGACTGGGG TTTAGTGACGTCAAA SH0591 607324 - 606248 - | hypothetical protein SH0592 607492 - 607953 + | hypothetical protein TERM 758 608000 - 607966 - T 70 -5.2 -4.58213 | gap 2, opp_overlap 607966 607987 TAATGAATCATAAAA GCTGTAACAAC--GAG TAATG CTCAAGTCGTTACAGC TTGTTTTTTATGATT TERM 759 607987 - 608003 + T 70 -2.9 -5.37345 | opp_overlap 607966, overlap 607966 ACAACGAGTAATGCT CAAGTCG TTA CAGCTTG TTTTTTATGATTAAA cysD 609300 - 608014 - | O-acetylhomoserine sulfhydrylase TERM 760 609500 - 609457 - R 73 -7.7 -3.8211 | gap 1, opp_overlap 609465, overlap 609455 609465 TAAAATCAAGAAATA CTAAGCAAGAGAAGGCACTT GATAT AAGCACCTTCTCTTT-TTAG TCAGCTATTACGAGT TERM 761 609465 - 609493 + r 79 -6.7 -4.74132 | opp_overlap 609465 609457 609455 AGAAATACTAAGCAA GAGAAGGCACTTG ATA TAAGCACCTTCTC TTTTTAGTCAGCTAT TERM 762 609493 - 609465 - R 88 -10.4 -3.48558 | opp_overlap 609465, overlap 609457 609455 AGAAATACTAAGCAA GAGAAGGCACTT GATAT AAGCACCTTCTC TTTTTAGTCAGCTAT SH0594 611154 - 609574 - | hypothetical protein SH0595 611498 - 612121 + | hypothetical protein SH0596 612177 - 612977 + | hypothetical protein SH0597 613154 - 613816 + | hypothetical protein SH0598 613809 - 614603 + | hypothetical protein TERM 763 614657 - 614601 - T 100 -15.8 -4.27467 | gap 1, opp_overlap 614606 614612, overlap 614606 614612 GAAGATGAAGATAAA TAAATTAAAAAGTCAGTTTTCACTTGA ATCA CCAAATGAAAACTGACTTTT-AATCTA CTATGCTTTGTCCAC TERM 764 614606 - 614653 + T 100 -13.1 -2.91126 | opp_overlap 614601 614606 614612, overlap 614612 TGAAGATAAATAAAT TAAAAAGTCAGTTTTCACTTG AATCAC CAAATGAAAACTGACTTTTAA TCTACTATGCTTTGT TERM 765 614653 - 614606 - T 100 -16 -3.40022 | opp_overlap 614606 614612, overlap 614601 614612 TGAAGATAAATAAAT TAAAAAGTCAGTTTTCACTTGA ATCA CCAAATGAAAACTGACTTTTAA TCTACTATGCTTTGT TERM 766 614647 - 614612 - T 100 -15 -5.13137 | opp_overlap 614612 614606, overlap 614606 614601 TAAATAAATTAAAAA GTCAGTTTTCACTTGA ATCA CCAAATGAAAACTGAC TTTTAATCTACTATG TERM 767 614612 - 614647 + T 100 -12.1 -4.38171 | opp_overlap 614606 614601 614612, overlap 614606 TAAATAAATTAAAAA GTCAGTTTTCACTTG AATCAC CAAATGAAAACTGAC TTTTAATCTACTATG SH0599 616124 - 614658 - | hypothetical protein SH0600 616794 - 616114 - | hypothetical protein SH0601 617293 - 618468 + | hypothetical protein TERM 768 618558 - 618570 + T 72 -3.4 -5.1925 | overlap 618540 CTGAACTGAAAATGC GCTT AAATC AAGC TTTTTTCAGTTCTAG TERM 769 618596 - 618638 + T 100 -9.4 -4.88895 | gap 2 TCTAGTCATCCTTGC GGGGGTGGGACGACGAATTT AAAAA GAATTC-T-GTCCCACTCCC TTTCTTTATTTATTT SH0602 619993 - 618644 - | hypothetical protein TERM 770 620111 - 620084 - R 100 -9.3 -5.44119 | opp_overlap 620084 TCTATTCTAAAAAAA CCTAAGTATGA ACGTAG TCACACTTAGG TTTACAATATTAATC SH0603 621785 - 620121 - | hypothetical protein SH0604 621971 - 622570 + | hypothetical protein TERM 771 622624 - 622587 - T 81 -8.6 -4.12296 | opp_overlap 622587 TTTAGAATGAAAGAA GCATTTAATCAACATC GCTAAA GATGAAGATTAAATGC TTTTTAAATGATGTT TERM 772 622587 - 622624 + T 90 -8.6 -4.70266 | opp_overlap 622587 TTTAGAATGAAAGAA GCATTTAATCAACATC GCTAAA GATGAAGATTAAATGC TTTTTAAATGATGTT SH0605 623709 - 622666 - | hypothetical protein opuCA 624141 - 625448 + | glycine betaine/carnitine/choline ABC transporter opuCB 625448 - 626083 + | hypothetical protein opuCC 626108 - 627055 + | glycine betaine/carnitine/choline ABC transporter opuCC opuCD 627055 - 627741 + | glycine betaine/carnitine/choline ABC transporter TERM 773 627788 - 627759 - T 100 -13.7 -5.04601 | opp_overlap 627759 GTTACAAATGAAAAA GAACCTGAGCACA ACAT TGTGTTCAGGTTC TTTTTAAAATGTTTA TERM 774 627759 - 627788 + T 100 -15.9 -4.6856 | opp_overlap 627759 GTTACAAATGAAAAA GAACCTGAGCACA ACAT TGTGTTCAGGTTC TTTTTAAAATGTTTA lrgB 628502 - 627801 - | antiholin-like protein LrgB lrgA 628957 - 628502 - | murein hydrolase regulator LrgA lytR 630000 - 629230 - | two-component response regulator LytR lytS 631755 - 630001 - | two-component sensor histidine kinase SH0614 632190 - 633584 + | hypothetical protein TERM 775 633610 - 633638 + F 100 -11.2 -5.18357 | opp_overlap 633614 AGTTTTTAATAGTGA GATATCGAATTC GATTA GAGTTCGATATC TTTTTTAATAAATTA SH0615 633768 - 634700 + | 2-dehydropantoate 2-reductase SH0616 634820 - 634912 + | hypothetical protein TERM 776 635153 - 635120 - g 76 -9.8 -2.90194 | ACCCCTCCAATGACA TTATTGAATCAGGT GGGATT ACCAGATTCAATAA AAAAAGCAACCTATC SH0617 634985 - 635458 + | hypothetical protein SH0618 635514 - 636365 + | hypothetical protein TERM 777 636424 - 636379 - T 100 -22.3 -4.33708 | opp_overlap 636382, overlap 636382 AAATTATTAGTAAAA GAAGCACTGTTACAAGCTAAT TGCA ATTAGCTTGTAACAGTGCTTG TTGTATTGATGGAAT TERM 778 636421 - 636382 - T 100 -24 -4.27443 | opp_overlap 636382, overlap 636379 TTATTAGTAAAAGAA GCACTGTTACAAGCTAAT TGCA ATTAGCTTGTAACAGTGC TTGTTGTATTGATGG TERM 779 636382 - 636421 + T 100 -24 -3.98627 | opp_overlap 636382 636379 TTATTAGTAAAAGAA GCACTGTTACAAGCTAAT TGCA ATTAGCTTGTAACAGTGC TTGTTGTATTGATGG SH0619 637285 - 636452 - | hypothetical protein TERM 780 636688 - 636718 + g 77 -9.8 -3.06796 | ATGTGCGTCTTTCTT CTTTTGGATAATGC ATT GCATTGACCAAAGG TTGAATGAAGTAAAG SH0620 638877 - 637393 - | hypothetical protein TERM 781 639533 - 639551 + G 82 -8.8 -3.93984 | opp_overlap 639532, overlap 639522 639542 TGTAGCGGTAAGTAT CGCTTCTG GTG CAGATGCG TTTGTAGCTGCATTT TERM 782 640814 - 640794 - g 71 -8.5 -3.10732 | AGACCAATTTCAAGA TTTATTGAT AAG ATCAATAAA AAAGCGAATGATAAA SH0621 639156 - 640982 + | hypothetical protein TERM 783 640985 - 641039 + T 83 -7.5 -4.73388 | gap 1, opp_overlap 640984 640995, overlap 640995 ATTACACAAATAAAC TTATAGAAAAGCCCATAGATAATGCA AGGT TACATTATCTATGGGCTTTAAT-TGA TTTTTAGTGAGCGTT TERM 784 641030 - 640995 - T 100 -18.6 -4.59081 | opp_overlap 640985 640995, overlap 640984 TAAACTTATAGAAAA GCCCATAGATAATGCA AGGT TACATTATCTATGGGC TTTAATTGATTTTTA TERM 785 640995 - 641030 + T 100 -16.4 -4.10085 | opp_overlap 640995 640984, overlap 640985 TAAACTTATAGAAAA GCCCATAGATAATGCA AGGT TACATTATCTATGGGC TTTAATTGATTTTTA SH0622 643250 - 641043 - | hypothetical protein TERM 786 643500 - 643541 + r 80 -6.1 -4.97405 | gap 1, opp_overlap 643505, overlap 643505 AGATCATACAAATAT AAAAACTGAGAA-AAGCTTG ATA TAAGCGTCTTCTCAGTTTTA TTTGTTTTTATAAAT TERM 787 643536 - 643505 - R 91 -7.5 -5.26155 | gap 1, opp_overlap 643505 643500 ATACAAATATAAAAA CTGAGAAAA-GCTT GATAT AAGCGTCTTCTCAG TTTTATTTGTTTTTA TERM 788 643505 - 643536 + r 84 -6 -5.3167 | gap 1, opp_overlap 643505, overlap 643500 ATACAAATATAAAAA CTGAGAA-AAGCTTG ATA TAAGCGTCTTCTCAG TTTTATTTGTTTTTA aapA 644992 - 643592 - | D-serine/D-alanine/glycine transporter TERM 789 645053 - 645066 + H 71 -2.5 -5.45802 | TTGTAAACGCTTTCT TTTTT ATGT AAAAA TTTTTCTTTTAACAA SH0624 645433 - 646122 + | hypothetical protein SH0625 646803 - 646180 - | hypothetical protein SH0626 646944 - 647426 + | hypothetical protein TERM 790 647482 - 647519 + T 91 -10.1 -3.93216 | gap 1, opp_overlap 647482, overlap 647485 ATACAGTAATTAAAA GAACTGAGAAGGCGCT CTTTTTA AGCGT-TTCTCAGTTC TTGTTATACTTTCAC TERM 791 647519 - 647482 - T 83 -8.6 -4.48333 | gap 1, opp_overlap 647482 647485 ATACAGTAATTAAAA GAACTGAGAAGGCGCTC TTTTT AAGCGT-TTCTCAGTTC TTGTTATACTTTCAC SH0627 648296 - 647538 - | hypothetical protein scdA 648982 - 648314 - | cell wall biosynthesis protein ScdA TERM 792 649176 - 649145 - R 100 -8.9 -5.58209 | gap 1, opp_overlap 649145 TGAAATGCAAAAAAA CTGAGAAAA-GCTC GATAT GAGCATCTTCTCAG TTTAGTCGACTACTG TERM 793 649145 - 649176 + r 71 -7.4 -3.75169 | gap 1, opp_overlap 649145 TGAAATGCAAAAAAA CTGAGAA-AAGCTCG ATA TGAGCATCTTCTCAG TTTAGTCGACTACTG tcaB 650456 - 649257 - | hypothetical protein TERM 794 650399 - 650432 + g 100 -11.2 -4.57474 | opp_overlap 650411 GTCCAAATGCAGTCA TTACCCCTAATACT ATTAGA AGTAATAGGGGTAA TTTTGTATGAGTTGA TERM 795 650556 - 650533 - R 100 -8.2 -6.14618 | opp_overlap 650532, overlap 650497 TACAAAATAAAAAAA GCGACACA GAATTCAT TGTGTCGC CTAATATAGGTTGAT SH0630 651417 - 650617 - | hypothetical protein SH0631 652580 - 651435 - | hypothetical protein SH0632 652727 - 654199 + | hypothetical protein SH0633 654230 - 654610 + | hypothetical protein SH0634 654827 - 655693 + | hypothetical protein TERM 796 655817 - 655768 - T 95 -12.5 -3.23042 | opp_overlap 655768 655772 655816, overlap 655772 AATAGTGATTACGAA TAAAGAAGCCAGTAAATGACTCT TAAA AACTTCATTTACTAGCTTCTTTA TTTATAATACTTCGT TERM 797 655768 - 655817 + T 87 -9.7 -4.02424 | opp_overlap 655768 655772, overlap 655772 655816 AATAGTGATTACGAA TAAAGAAGCCAGTAAATGA CTCTTAAAAACT TCATTTACTAGCTTCTTTA TTTATAATACTTCGT TERM 798 655813 - 655772 - T 86 -8.9 -4.2704 | opp_overlap 655772 655768, overlap 655768 GTGATTACGAATAAA GAAGCCAGTAAATGACTCT TAAA AACTTCATTTACTAGCTTC TTTATTTATAATACT TERM 799 655772 - 655813 + T 74 -6.1 -4.59944 | opp_overlap 655768 655772, overlap 655768 GTGATTACGAATAAA GAAGCCAGTAAATGA CTCTTAAAAACT TCATTTACTAGCTTC TTTATTTATAATACT TERM 800 656089 - 656110 + T 78 -9.5 -3.13164 | opp_overlap 656094, overlap 656091 656094 TCTTAGAACGCCTTA TACAAGTGC AACA GCACTTGTG TTCAATAATTAAAAC TERM 801 656091 - 656108 + T 81 -9.9 -3.12595 | opp_overlap 656094, overlap 656089 656094 TTAGAACGCCTTATA CAAGTGC AACA GCACTTG TGTTCAATAATTAAA TERM 802 656217 - 656185 - T 95 -5.8 -5.83211 | opp_overlap 656185 656201 CATTAAAATAAAAAA GACAATTCCTAT ATTATTTCA ATAGAAATTGTC TGTTATACTTATTCC SH0635 656896 - 656318 - | hypothetical protein gpmA 657327 - 658013 + | phosphoglycerate mutase SH0637 658337 - 658224 - | hypothetical protein TERM 803 658408 - 658384 - H 76 -7.3 -4.33808 | GAAAGTAAGGTAAAA GTAAATAGTAA TTA TTACGATTTAC AAAATAACATAAACA SH0638 658505 - 659956 + | hypothetical protein SH0639 660209 - 661009 + | hypothetical protein SH0640 660984 - 661709 + | hypothetical protein SH0641 661706 - 662437 + | hypothetical protein TERM 804 662486 - 662448 - T 100 -9.2 -5.66229 | gap 1, opp_overlap 662448 ATTAATAATAAAAAA CACTTTTCTAAAGTTCA TAAAGT TGAACCT-AGAAAAGTG TTTTTTTGATTTATA TERM 805 662448 - 662486 + T 100 -7 -5.75822 | gap 1, opp_overlap 662448 ATTAATAATAAAAAA CACTTTTCTAAAGTTCA TAAAGT TGAACCT-AGAAAAGTG TTTTTTTGATTTATA fmhA 663747 - 662503 - | fmhA protein / lysostaphin immunity factor SH0643 664002 - 664361 + | hypothetical protein dsbG 664385 - 664981 + | hypothetical protein TERM 806 665087 - 665119 + F 89 -6.4 -5.47399 | opp_overlap 665087 665094 AAAGATTAATTTAAA GAAGAATTGTAGTG TACAT CGCTAGGATTCTTC TTTTTTTAAAATTAG TERM 807 665600 - 665590 - g 77 -5.4 -5.02074 | CCAGTCGCTAAAAAA GTTG CAG CAAC AATTAAAGATGATAA TERM 808 666770 - 666738 - g 77 -9.3 -3.30124 | opp_overlap 666744, overlap 666741 CTTTATGGGTGATAA CAATGATTCATTACT TAA AGAAATGGATCATTG GCCAACTTATTATCC SH0645 665284 - 666834 + | hypothetical protein SH0646 666972 - 667487 + | hypothetical protein TERM 809 667515 - 667560 + F 100 -15.7 -5.02287 | opp_overlap 667532 AAAAATACTTATATG GCTTCCTACAAAGTAGACATT AATG AATGTAAACTTTGTAGGGAGC TTTTATATTTTTGTA SH0647 667637 - 668116 + | hypothetical protein TERM 810 668162 - 668131 - f 76 -4 -5.44721 | gap 1 AGTATGTCAAAAAAA TTCAACTAAATT-TA AGT TATAATGTAGTTGAA ATGAGGTTGATGATA SH0648 668177 - 668359 + | hypothetical protein TERM 811 668371 - 668411 + F 100 -17.2 -5.47218 | opp_overlap 668371 668382 ATAGTAAATTACTAA GTGAGATAGAATCGTGTC TACAT GATACGATTTTATCTCAC TTTTTTTACCTAAAA TERM 812 668411 - 668371 - f 100 -12.8 -3.34629 | opp_overlap 668371, overlap 668382 ATAGTAAATTACTAA GTGAGATAGAATCGTGTC TACAT GATACGATTTTATCTCAC TTTTTTTACCTAAAA SH0649 668501 - 669322 + | hypothetical protein TERM 813 669333 - 669373 + F 95 -7.1 -5.5074 | gap 1, opp_overlap 669333 AGTAATCAATAATAG GGTTGTGTTATC-ACTAA GTTAAA TGAGTAGATAGCACAACC TTTTTTATTAAATTA SH0650 669505 - 670230 + | hypothetical protein TERM 814 670241 - 670261 + F 100 -11.9 -5.66338 | opp_overlap 670240 670241 ATTAGGATTTATAAG CTGAGGCAC AAT GTGTCTCAG TTTTTTATTGTATTT TERM 815 670261 - 670241 - f 75 -9.7 -2.62642 | opp_overlap 670241, overlap 670240 ATTAGGATTTATAAG CTGAGGCAC AAT GTGTCTCAG TTTTTTATTGTATTT TERM 816 671989 - 671977 - g 81 -7.7 -4.36348 | AAAACATCAAAAGAA GTACG TCA CGTAC TAGACTTTAAAGATA nasD 670465 - 672876 + | nitrite reductase nasE 672880 - 673194 + | assimilatory nitrite reductase nasF 673185 - 674129 + | uroporphyrin-III C-methyl transferase TERM 817 676102 - 676068 - g 77 -10 -3.04799 | TAGAAGGTTGGAATA CGGTAGCCTTTGCCAA AGA CTGGCAAGGACCACCA CGTCTGCAAAATGGT TERM 818 677766 - 677734 - g 74 -6.4 -4.27519 | gap 1, overlap 677735 AGTTTATAACAGAAA TGGTGTTGTAACTGC AAGA GCAGTCACATCAC-A CCGTATGCCAAGAGG TERM 819 677766 - 677735 - g 70 -8 -3.15788 | overlap 677734 GTTTATAACAGAAAT GGTGTTGTAACTGC AAGA GCAGTCACATCACA CCGTATGCCAAGAGG narG 674336 - 678019 + | respiratory nitrate reductase alpha chain TERM 820 678114 - 678092 - g 73 -7.7 -3.7347 | CGTAACATGTAAGAA CACTTGGAC TAACC GTCCAGGTG CAGAATACATGTGGT narH 678009 - 679562 + | nitrate reductase beta chain SH0656 679555 - 680130 + | hypothetical protein narI 680123 - 680806 + | nitrate reductase gamma chain nreA 680827 - 681276 + | hypothetical protein nreB 681286 - 682320 + | hypothetical protein nreC 682342 - 682995 + | hypothetical protein TERM 821 683011 - 683035 + F 80 -5.8 -5.09895 | opp_overlap 683011 ATGATGAAAATGAAA CTGAGACA GATTAGTAA TGTCTCAG TTTTTTGCGTACATA narK 683225 - 684382 + | nitrite extrusion protein TERM 822 684392 - 684441 + T 100 -10.3 -4.88495 | opp_overlap 684399, overlap 684399 AAATAAATTTATACA TTAAAAAGAGCAATACAAAGCTA AACA TAGTTTTGTATTGCTCTTTAACA TTTTATTCTGTATAT TERM 823 684399 - 684434 + T 100 -17.2 -3.80207 | opp_overlap 684399, overlap 684392 TTTATACATTAAAAA GAGCAATACAAAGCTA AACA TAGTTTTGTATTGCTC TTTAACATTTTATTC TERM 824 684434 - 684399 - T 100 -15 -4.84527 | opp_overlap 684399 684392 TTTATACATTAAAAA GAGCAATACAAAGCTA AACA TAGTTTTGTATTGCTC TTTAACATTTTATTC SH0662 684877 - 684461 - | hypothetical protein SH0663 685541 - 685098 - | hypothetical protein SH0664 685823 - 686182 + | hypothetical protein SH0665 686244 - 686209 - | hypothetical protein TERM 825 686264 - 686226 - G 100 -10.4 -4.9445 | opp_overlap 686229, overlap 686205 686229 ACAAGTAATGAAAAA TAAGGAGAACAGAATTCA TAA TGATTTCTGATCTCCTTT TTATAGTATTTTTAA TERM 826 686229 - 686261 + g 100 -12.1 -5.02201 | opp_overlap 686229 686226 AGTAATGAAAAATAA GGAGAACAGAATTCA TAA TGATTTCTGATCTCC TTTTTATAGTATTTT TERM 827 686261 - 686229 - G 100 -12.1 -4.54681 | opp_overlap 686229, overlap 686226 AGTAATGAAAAATAA GGAGAACAGAATTCA TAA TGATTTCTGATCTCC TTTTTATAGTATTTT gltT 686390 - 687667 + | proton/sodium-glutamate symport protein TERM 828 687689 - 687712 + T 100 -11.1 -5.5604 | AATCTGACATTTTTA GTATCGAGC ACATAG GCTCGATAC TTTTTTATTGCTTAA TERM 829 687800 - 687771 - T 100 -8.7 -5.23316 | opp_overlap 687771 687791 TATGATATTAAAAAA CTGCCAACAAAGA TTTC TCTTCATTGACAG TGATTTATTGTAATT SH0667 688168 - 687815 - | hypothetical protein TERM 830 688345 - 688312 - R 91 -3.9 -5.96521 | gap 1, opp_overlap 688312 688316 688343, overlap 688316 688343 ATTAATCAAAAAAAA GAGTTCAGAACC-TGA TTA TCTTAGTACTGAACTC TTTAATATAAACAGT SH0668 688793 - 688371 - | hypothetical protein SH0669 690965 - 688860 - | hypothetical protein TERM 831 691851 - 691824 - R 95 -9.2 -5.10029 | opp_overlap 691824 ATTAATTTTAAAAAA GTTGGGACAACA TATG CGTTGTCTCAAC TTTTTTGTTTTTCAT TERM 832 691824 - 691851 + r 100 -10.7 -5.95286 | opp_overlap 691824 ATTAATTTTAAAAAA GTTGGGACAAC ATATGC GTTGTCTCAAC TTTTTTGTTTTTCAT SH0670 692350 - 691976 - | hypothetical protein TERM 833 692088 - 692107 + g 79 -4.3 -5.29742 | TTATCTTGTTTGAAG TCAGCTT TTAATT GAGCTGA TTTGTTTTTTTCTAT scrA 692529 - 693971 + | PTS system sucrose-specific IIBC component TERM 834 694012 - 693982 - T 90 -8.4 -4.66537 | opp_overlap 693983, overlap 693983 AATAAACGAAATAAA GTCGACATTCTG ATTTATG CAGAATGTCGAT TTTTTGTATAATTAG TERM 835 694011 - 693983 - T 95 -11.9 -3.37482 | opp_overlap 693983, overlap 693982 ATAAACGAAATAAAG TCGACATTCTG ATTTATG CAGAATGTCGA TTTTTTGTATAATTA TERM 836 693983 - 694011 + T 100 -11.9 -5.42131 | opp_overlap 693982 693983 ATAAACGAAATAAAG TCGACATTCTG ATTTATG CAGAATGTCGA TTTTTTGTATAATTA SH0672 694972 - 694031 - | hypothetical protein SH0673 695618 - 695004 - | hypothetical protein TERM 837 695233 - 695248 + g 83 -4.8 -5.46657 | overlap 695229 TTTTGCATATTTTCT TTCATT AAGG AATGAA TTTTTTCTTCAAGTC SH0674 695784 - 697061 + | hypothetical protein TERM 838 697076 - 697109 + F 100 -11.1 -4.92385 | opp_overlap 697075 AGAGTTTAAATCTAG CCCTCGATTTAGCAG ATTG CTATTAAATCGGGGG TTTTATTTCAATATA TERM 839 697206 - 697187 - f 77 -9.4 -2.83012 | AATCGGAGTATTATA TTCGTTAG ACAT CTAACGAA ATGGAGTGAGATCAT SH0675 697220 - 697648 + | hypothetical protein TERM 840 697746 - 697713 - f 76 -8.5 -3.5332 | gap 1, opp_overlap 697716, overlap 697715 AAATTTTTAAACGAA TA-GTTAGATATCTAA TTA TTAGACATCTAACATA AAGGAGATTATGGAA TERM 841 697743 - 697715 - f 100 -12.7 -3.33419 | opp_overlap 697716, overlap 697713 ATTTTTAAACGAATA GTTAGATATCTAA TTA TTAGACATCTAAC ATAAAGGAGATTATG SH0676 697762 - 698064 + | hypothetical protein SH0677 698077 - 699120 + | hypothetical protein SH0678 699366 - 700613 + | hypothetical protein SH0679 700627 - 701235 + | hypothetical protein SH0680 701445 - 701861 + | hypothetical protein TERM 842 701876 - 701919 + F 95 -7.9 -5.48825 | gap 2, opp_overlap 701876 ATTGGATTGAAGTGA GACTTTTCATTTTAATAGCAC AATC GTGTTATTAA--TGAAAAGTC TTTTTTTAGCTAATA TERM 843 702021 - 702007 - f 70 -5.8 -4.26461 | overlap 702004 ATTAAGGCAAAATAA TGATAA TAA TTATCA TTCGAAACGGGACTT SH0681 702056 - 703087 + | hypothetical protein SH0682 703113 - 703514 + | hypothetical protein SH0683 704616 - 703621 - | hypothetical protein TERM 844 704118 - 704100 - G 78 -7.4 -4.14056 | ATCCTAAATTAGAAA GCATAAGC ACT GCTAATGC GCCTACGCCACCAGA TERM 845 704756 - 704743 - H 87 -2.5 -6.28401 | opp_overlap 704735 704743, overlap 704735 CAAAAAATAAAAAAA TTTTT ATTT AAAAA TGTATTTGAATTGTT SH0684 704963 - 705826 + | hypothetical protein SH0685 705904 - 707049 + | hypothetical protein SH0686 707030 - 708775 + | hypothetical protein TERM 846 708836 - 708794 - T 81 -8.1 -4.3586 | opp_overlap 708799, overlap 708799 TTATGGATAGTAAAA TGAAACCTCGAG-ACTTGT GGGAATA ACAAGTACTCGAGGTTT-A TTAGTTATTATGATC TERM 847 708799 - 708832 + T 91 -10.5 -4.4078 | gap 1, opp_overlap 708794 708799 GATAGTAAAATGAAA CCTCGAG-ACTTGT GGGAATA ACAAGTACTCGAGG TTTATTAGTTATTAT TERM 848 708832 - 708799 - T 91 -10.5 -4.25388 | gap 1, opp_overlap 708799, overlap 708794 GATAGTAAAATGAAA CCTCGAG-ACTTGT GGGAATA ACAAGTACTCGAGG TTTATTAGTTATTAT SH0687 709491 - 708844 - | hypothetical protein SH0688 709753 - 709541 - | hypothetical protein SH0689 709938 - 710453 + | hypothetical protein SH0690 712327 - 710639 - | hypothetical protein TERM 849 711854 - 711870 + g 78 -2.3 -5.58454 | GTATGCCAATTTGTT CAAATCA AAA TGATTTA TTTTTTTAATATCAA lctP 712704 - 714305 + | hypothetical protein TERM 850 714385 - 714347 - T 100 -11.9 -4.64598 | opp_overlap 714349, overlap 714349 TAATTATTTCAAAAA TAGCCCGTAAATGAATT GTAAA AATTCGTTTACGGGCTT TTTGAATATTCATAG TERM 851 714383 - 714349 - T 100 -14.5 -3.93148 | opp_overlap 714349, overlap 714347 ATTATTTCAAAAATA GCCCGTAAATGAATT GTAAA AATTCGTTTACGGGC TTTTTGAATATTCAT TERM 852 714349 - 714383 + T 100 -16.7 -4.75308 | opp_overlap 714349 714347 ATTATTTCAAAAATA GCCCGTAAATGAATT GTAAA AATTCGTTTACGGGC TTTTTGAATATTCAT SH0692 715586 - 714435 - | hypothetical protein SH0693 715896 - 717374 + | malate:quinone oxidoreductase TERM 853 717403 - 717447 + T 100 -12.3 -4.90869 | opp_overlap 717399 717397 717403 ATAAAATAACATTAA GCTCCTTAAAAAGTTTGCACT TTA AGTGTTTACTTTATAAGGAGC TTTTTCATTAGTAAT TERM 854 717447 - 717403 - T 86 -10.1 -3.54739 | opp_overlap 717403, overlap 717399 717397 ATAAAATAACATTAA GCTCCTTAAAAAGTTTGCACT TTA AGTGTTTACTTTATAAGGAGC TTTTTCATTAGTAAT SH0694 717914 - 717462 - | hypothetical protein SH0695 718351 - 717911 - | hypothetical protein SH0696 719845 - 718475 - | hypothetical protein SH0697 720512 - 719838 - | hypothetical protein SH0698 720648 - 721703 + | hypothetical protein SH0699 721703 - 722368 + | hypothetical protein TERM 855 722390 - 722374 - T 84 -6.7 -5.1675 | opp_overlap 722386, overlap 722378 722386 CGAGTTATGAAAAAA TAAACTT AGA AAGTTTA AATAGTTGTGTCATT TERM 856 722448 - 722485 + T 100 -15.7 -5.0538 | opp_overlap 722445, overlap 722449 CAGCTATAATCATTT TGCGGGAGTGGAACA AAACATAC TGTTCCACTCCCGCC TTTTTTAAAATAGAA TERM 857 722449 - 722484 + T 100 -19.2 -3.62746 | opp_overlap 722445, overlap 722448 AGCTATAATCATTTT GCGGGAGTGGAACA AAACATAC TGTTCCACTCCCGC CTTTTTTAAAATAGA SH0700 723446 - 722490 - | hypothetical protein SH0701 723611 - 724069 + | hypothetical protein TERM 858 724946 - 724936 - g 71 -5.4 -4.62054 | overlap 724920 TGAAGTAAACGAAAA CTTC AAT GAAG CGTTATTAACAGTCA tcaA 724181 - 725545 + | hypothetical protein tcaB 725805 - 727013 + | hypothetical protein TERM 859 727113 - 727068 - T 100 -20.1 -3.85082 | opp_overlap 727069 727073 727076, overlap 727069 AAATACAGTATCAAA TTGAAGAAGCCATTAATCGAG TTAA CTCAATTAATGGCTTCTTCAT TGATTAAATGCAACT TERM 860 727112 - 727069 - T 100 -23.6 -2.89965 | opp_overlap 727069 727073 727076, overlap 727068 AATACAGTATCAAAT TGAAGAAGCCATTAATCGAG TTAA CTCAATTAATGGCTTCTTCA TTGATTAAATGCAAC TERM 861 727069 - 727112 + T 100 -21.4 -3.37344 | opp_overlap 727069 727068, overlap 727073 727076 AATACAGTATCAAAT TGAAGAAGCCATTAATCGAG TTAA CTCAATTAATGGCTTCTTCA TTGATTAAATGCAAC TERM 862 727073 - 727108 + T 100 -16.4 -3.46081 | opp_overlap 727069 727068, overlap 727069 727076 CAGTATCAAATTGAA GAAGCCATTAATCGAG TTAA CTCAATTAATGGCTTC TTCATTGATTAAATG TERM 863 727076 - 727105 + T 95 -12.3 -3.86031 | opp_overlap 727069 727068, overlap 727073 727069 TATCAAATTGAAGAA GCCATTAATCGAG TTAA CTCAATTAATGGC TTCTTCATTGATTAA SH0704 727678 - 727127 - | hypothetical protein TERM 864 727368 - 727381 + g 83 -2.4 -5.77988 | opp_overlap 727368 TGAGAAATAAAAATA GCAT GGTAAA ATGC TTTTTTTCTATATAT SH0705 727807 - 728454 + | hypothetical protein TERM 865 728762 - 728748 - g 76 -2.9 -5.42514 | overlap 728740 TGATAAACGAAAAAA TCATT TCGAG AATGA ACAAGATCAGCAAGA SH0706 728467 - 730521 + | hypothetical protein TERM 866 730550 - 730582 + T 100 -9.4 -5.7946 | gap 1, opp_overlap 730550 GACATTATTTTTAAA GTATCGG-TACACTT CTTT AAGTGTAATCGATAC TTTTTTTATTAGAAA TERM 867 730635 - 730602 - T 80 -3.9 -5.67063 | gap 1 TTTATTAGAAAAAAA GCCATTGT-GACTAAA TTA TCGCGTCTACAATGGC AAAAAATATATTATT SH0707 731293 - 730646 - | hypothetical protein SH0708 731489 - 732388 + | hypothetical protein TERM 868 732462 - 732498 + T 86 -7.4 -5.07486 | ATCACGTAGGTAATT GAACTGAGAAGGGC ATTTAATTG GTCATTCTCAGTTC TTTTTGTTGAAGATG SH0709 732969 - 732574 - | hypothetical protein SH0710 733448 - 732972 - | hypothetical protein SH0711 733569 - 734516 + | hypothetical protein fni 734561 - 735610 + | isopentenyl pyrophosphate isomerase TERM 869 735663 - 735692 + T 100 -13.7 -5.31877 | opp_overlap 735663 AATTACACAAATAAA GCAAGTTGAGAGT TTGG ACTCCCAACTTGC TTTTTTATAATGCCT TERM 870 735692 - 735663 - T 100 -15.9 -4.64952 | opp_overlap 735663 AATTACACAAATAAA GCAAGTTGAGAGT TTGG ACTCCCAACTTGC TTTTTTATAATGCCT SH0713 736930 - 735719 - | hypothetical protein SH0714 737825 - 737217 - | hypothetical protein SH0715 738039 - 738236 + | hypothetical protein SH0716 738229 - 738978 + | hypothetical protein TERM 871 738987 - 739029 + F 100 -10.8 -5.4387 | opp_overlap 738993, overlap 738988 738993 TGAATAAATGTTTTA CGCAAACGCTGTCTATTAAA AAT TTTAATAGAGAGCGTTTTCA TTTTTTAATTTATAT TERM 872 738988 - 739028 + F 100 -14.3 -3.83882 | opp_overlap 738993, overlap 738987 738993 GAATAAATGTTTTAC GCAAACGCTGTCTATTAAA AAT TTTAATAGAGAGCGTTTTC ATTTTTTAATTTATA TERM 873 738993 - 739023 + F 100 -12.8 -4.88217 | opp_overlap 738993, overlap 738988 738987 AATGTTTTACGCAAA CGCTGTCTATTAAA AAT TTTAATAGAGAGCG TTTTCATTTTTTAAT TERM 874 739023 - 738993 - f 100 -12.8 -3.65199 | opp_overlap 738993 738988 738987 AATGTTTTACGCAAA CGCTGTCTATTAAA AAT TTTAATAGAGAGCG TTTTCATTTTTTAAT SH0717 739181 - 739507 + | hypothetical protein SH0718 739538 - 740548 + | hypothetical protein TERM 875 740600 - 740558 - T 89 -6.5 -5.48163 | gap 1, opp_overlap 740561 740565, overlap 740560 740561 AAATAAAGTAAAAAA CATTAAAGCGGGTAGATCGT CAGT ACGATTTATCCGCTTT-ATA TTATGCTTAATAGAA TERM 876 740599 - 740560 - T 88 -9.4 -4.33053 | opp_overlap 740561 740565, overlap 740558 740561 ATAAAGTAAAAAACA TTAAAGCGGGTAGATCGT CAGT ACGATTTATCCGCTTTAT ATTATGCTTAATAGA TERM 877 740561 - 740598 + T 100 -17.3 -3.34404 | opp_overlap 740560 740558 740561, overlap 740565 TAAAGTAAAAAACAT TAAAGCGGGTAGATCGT CAGT ACGATTTATCCGCTTTA TATTATGCTTAATAG TERM 878 740598 - 740561 - T 100 -12.9 -3.17392 | opp_overlap 740561 740565, overlap 740560 740558 TAAAGTAAAAAACAT TAAAGCGGGTAGATCGT CAGT ACGATTTATCCGCTTTA TATTATGCTTAATAG TERM 879 740565 - 740594 + T 100 -13.7 -4.30911 | opp_overlap 740561 740560 740558, overlap 740561 GTAAAAAACATTAAA GCGGGTAGATCGT CAGT ACGATTTATCCGC TTTATATTATGCTTA SH0719 741270 - 740617 - | hypothetical protein TERM 880 741105 - 741117 + g 78 -7.7 -4.08939 | ATACTGCTTTATGTG GACCA CCA TGGTC TTTATATGCCTGTTC SH0720 741432 - 742124 + | hypothetical protein TERM 881 742177 - 742137 - T 100 -8.7 -5.59962 | opp_overlap 742138 742140, overlap 742140 TAAAATAAATAAAAA TAAGCCAGAAAATGAA-CT AAGAA AGATTCATTTTCTGGC-TA TTTGTATGTGCACTT TERM 882 742138 - 742177 + T 91 -10.3 -4.13648 | gap 1, opp_overlap 742137 742140, overlap 742140 AAAATAAATAAAAAT AAGCCAGAAAATGAA-CT AAGAA AGATTCATTTTCTGGCTA TTTGTATGTGCACTT TERM 883 742175 - 742140 - T 100 -12.9 -4.78345 | gap 1, opp_overlap 742138 742140, overlap 742137 AATAAATAAAAATAA GCCAGAAAATGAA-CT AAGAA AGATTCATTTTCTGGC TATTTGTATGTGCAC TERM 884 742140 - 742175 + T 100 -12.9 -3.65996 | gap 1, opp_overlap 742140 742137, overlap 742138 AATAAATAAAAATAA GCCAGAAAATGAA-CT AAGAA AGATTCATTTTCTGGC TATTTGTATGTGCAC TERM 885 742243 - 742273 + T 100 -12.8 -5.95946 | opp_overlap 742242 742241 ATGAGTCCAAATATT GAGATTAAGCAACT TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 743563 - 742247 - | transposase for ISSha1 TERM 886 743505 - 743519 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 887 743680 - 743650 - R 100 -14.2 -5.36364 | opp_overlap 743650 TCAAAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 888 743650 - 743680 + r 100 -16.4 -4.30987 | opp_overlap 743650 TCAAAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT SH0722 744810 - 743719 - | hypothetical protein SH0723 745066 - 746001 + | formimidoylglutamase TERM 889 746083 - 746117 + F 70 -3.1 -5.33921 | gap 2, overlap 746093 TTCAAACATGAAAGA GTAGAACGTTGAATTCG CGT TGAATTC--TGTTCTAC TTTTTTAATTACTTT SH0724 746191 - 746958 + | hypothetical protein SH0725 746986 - 747372 + | sulfate permease SH0726 747369 - 748502 + | hypothetical protein TERM 890 748733 - 748713 - g 72 -8.3 -3.37612 | TTCAATCTGAACTAA CACCACAAC CTG ACTGTGGTG AAACATCGTATGAAG TERM 891 749102 - 749088 - g 89 -8.6 -4.42464 | opp_overlap 749088 AATCTTTTAAAGAAA CGTTTG AAA CAAACG TATATCCAGTATTCT SH0727 748625 - 749506 + | hypothetical protein TERM 892 749529 - 749556 + F 95 -8.5 -5.0916 | opp_overlap 749529 AGAATATAAATCCAA CGCAAGGGTTT CAAAAA AGACTCTTGCG TTTTTATGTTGAAAG SH0728 749584 - 750195 + | hypothetical protein SH0729 750417 - 751610 + | hypothetical protein TERM 893 751686 - 751665 - f 70 -3.2 -5.29445 | opp_overlap 751674, overlap 751674 GTTTAATAAGAAAAA TTAAAATA ATTAAA TATTTTAA TAGTTCAAAGTTTGG SH0730 751755 - 752273 + | hypothetical protein TERM 894 752372 - 752413 + T 100 -14.6 -4.43815 | opp_overlap 752364 TTACTAAGGTGGATA CCCCAACAAGGAGAGTTT ACAAAG ACAATCTCCTTGTTGGGG TTTTGATGTGTTAAT SH0731 753225 - 752464 - | hypothetical protein glvC 753446 - 755017 + | PTS system, arbutin-like IIBC component TERM 895 755066 - 755098 + T 100 -7.3 -5.73339 | gap 1, opp_overlap 755066 TGGACAAGTGAAAAA GACAATTTCTAATG AAATAA CAT-AGAAATTGTC TTTTTTTATAATTGT TERM 896 755098 - 755066 - T 81 -7.3 -4.78149 | gap 1, opp_overlap 755066 TGGACAAGTGAAAAA GACAATTTCTAATG AAATAA CAT-AGAAATTGTC TTTTTTTATAATTGT TERM 897 755263 - 755235 - T 100 -6.9 -6.17669 | AACAAAATAAAAAAA TGAGAAAATAC TATAAGT GTATCTTCTCA GATCAGTAAGTTAGA SH0733 755862 - 755332 - | hypothetical protein SH0734 756174 - 756818 + | hypothetical protein SH0735 756823 - 757014 + | hypothetical protein SH0736 757082 - 757011 - | hypothetical protein SH0737 757310 - 757119 - | hypothetical protein SH0738 757660 - 757310 - | hypothetical protein SH0739 758082 - 759470 + | hypothetical protein TERM 898 759585 - 759555 - T 100 -14.2 -4.11692 | opp_overlap 759555 GATTCATGTTTAAAA GAGGTTGAGACA TTAACGT TGTCTCAACCTC TTTTTGTGATAGTTA TERM 899 759555 - 759585 + T 100 -14.2 -4.94902 | opp_overlap 759555 GATTCATGTTTAAAA GAGGTTGAGACA TTAACGT TGTCTCAACCTC TTTTTGTGATAGTTA SH0740 760578 - 759706 - | hypothetical protein SH0741 762012 - 760579 - | hypothetical protein murQ 762912 - 762025 - | N-acetylmuramic acid-6-phosphate etherase SH0743 763964 - 762912 - | hypothetical protein TERM 900 763532 - 763517 - G 74 -6.2 -4.56597 | opp_overlap 763517, overlap 763531 TTCGTTGTTCAAAAA GGTTTA AAGC TAAACC TGTATCAGGTCTGGG SH0744 764526 - 764176 - | hypothetical protein SH0745 765297 - 764596 - | hypothetical protein TERM 901 765577 - 765599 + H 100 -9.2 -5.80248 | TTTCCTTTCTATTTG TCGGCTAG CAGATGA CTAGCCGA TTTTTTTGTGTCTTC SH0746 765686 - 766474 + | hypothetical protein TERM 902 767358 - 767340 - g 75 -4.7 -4.89852 | opp_overlap 767340 TCAGATTCAGAAAAA TGTTAAA ACCGA TTTAACA TTGAATGACATGAAT SH0747 766585 - 767532 + | hypothetical protein TERM 903 767584 - 767628 + F 78 -2.5 -5.81032 | gap 3, opp_overlap 767605 ATACTAGGAAATTTA TAGAGGTAGGACAATGAGA-GA GAAA TCATTTCA--GTCCTATCTCTA TTTTTTTTAAAATTG SH0748 767856 - 770810 + | hypothetical protein SH0749 770810 - 771283 + | hypothetical protein SH0750 771808 - 772587 + | hypothetical protein SH0751 772683 - 773807 + | hypothetical protein TERM 904 773826 - 773869 + T 70 -7.8 -3.51234 | gap 1, opp_overlap 773826 773832, overlap 773824 AAGACGGATACTGAA GACTAATTAAGCATATAAGTT AAT GATTAATATGCTTAAT-AGTC TGTTTCAGTTTCCGT SH0752 774858 - 773902 - | glycerate dehydrogenase SH0753 775251 - 774940 - | hypothetical protein SH0754 775582 - 775253 - | hypothetical protein TERM 905 775709 - 775669 - R 74 -2.1 -5.61824 | gap 2, opp_overlap 775707, overlap 775678 775680 TAAAACTTAAAAAAA GAGCC-AGA-ACAGAATTC TTTTT GAATTCCATGTCTTAGCTC TTCAAGAGTGATTTG SH0755 776496 - 775849 - | hypothetical protein TERM 906 775889 - 775877 - G 73 -7.7 -3.82378 | ATGTAGTTATAAGAA CTAGC TTG GCTAG CTGAAATTGTACGTG TERM 907 776698 - 776664 - R 100 -10.8 -5.23644 | opp_overlap 776664 AATGAAATACAAAAA CCTTGAACAACTCCGT AAT AAAGAGTAGTTCAAGG TTACGTACTGTAATA TERM 908 776664 - 776698 + r 73 -8.7 -3.1211 | opp_overlap 776664 AATGAAATACAAAAA CCTTGAACAACTC CGTAATAAA GAGTAGTTCAAGG TTACGTACTGTAATA SH0756 777242 - 776814 - | hypothetical protein TERM 909 776950 - 776969 + g 77 -8.6 -3.54902 | opp_overlap 776949 ACAAATAGTAATATT GTAGCGAT AATG ATCGCTGC TTCATTATTAACTAC SH0757 777654 - 778724 + | hypothetical protein TERM 910 779316 - 779334 + G 70 -8.2 -3.32963 | CGCAGGTGCGGTCTT TGGTGATA AAA TGTCACCA TTATCAGATACAACT SH0758 778837 - 780243 + | hypothetical protein TERM 911 780591 - 780559 - T 75 -9.3 -2.63089 | opp_overlap 780560, overlap 780558 780556 GATGAGTCCAAATAT TGAGATTAAGCAACT TTA AGTTGTTTAATCTCT TTTTTTGTTGTTGAG TERM 912 780560 - 780590 + T 100 -15 -5.95946 | opp_overlap 780559 780558 780556 ATGAGTCCAAATATT GAGATTAAGCAACT TTA AGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 780809 - 780564 - | transposase for ISSha1 tnp 781763 - 781089 - | transposase for IS431mec TERM 913 781129 - 781158 + g 77 -5.7 -4.96848 | opp_overlap 781131 781132, overlap 781132 TCGTGGCATGGCGAA AATCCGTAGATCT GAAG AGATCTGCGGTTC TTTTTATATAGAGCG TERM 914 781155 - 781132 - G 77 -9.6 -3.06515 | opp_overlap 781132 781129, overlap 781131 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 915 781132 - 781155 + g 100 -11.8 -4.58943 | opp_overlap 781131 781132, overlap 781129 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGATCTGCGG TTCTTTTTATATAGA TERM 916 781718 - 781704 - G 76 -10 -2.90763 | TGCATATCTTAGATA GTAGCC AAC GGCTAC AGTGATAACATCTTT tnp 782627 - 781788 - | transposase for ISSha1 TERM 917 782569 - 782583 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 918 782713 - 782743 + r 100 -16.4 -4.30987 | opp_overlap 782713 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 919 782743 - 782713 - R 100 -14.2 -5.20783 | opp_overlap 782713 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 920 782910 - 782888 - R 100 -9.2 -5.22943 | opp_overlap 782888 AGTAAACGCAAAAAA GCGATCCA TTTTTTT TGGATCGC TTTTAAACTTACTAA TERM 921 782888 - 782910 + r 86 -9.2 -4.20696 | opp_overlap 782888 AGTAAACGCAAAAAA GCGATCCA TTTTTTT TGGATCGC TTTTAAACTTACTAA SH0762 783680 - 782931 - | hypothetical protein TERM 922 783907 - 783892 - H 91 -7.6 -5.27779 | opp_overlap 783892 TGTAATATTAAAAAA CGTTGT CATA ACAACG TTTAAAAAATTATAT TERM 923 783892 - 783907 + H 71 -7.6 -3.58801 | opp_overlap 783892 TGTAATATTAAAAAA CGTTGT CATA ACAACG TTTAAAAAATTATAT TERM 924 784144 - 784125 - H 73 -3 -5.38321 | AAACATTATAAAAAA TATACAAA AACA TTTATATA AGATAATAAAATGAT SH0763 784353 - 785213 + | hypothetical protein SH0764 785475 - 786203 + | hypothetical protein SH0765 786238 - 786561 + | hypothetical protein TERM 925 787172 - 787125 - g 81 -6 -4.90217 | opp_overlap 787131 787134, overlap 787129 CAAAGATACTAAAAA GAAATATAATTTAAATTATGAA GAGG TTTATATTTTAAATTATATTGC GAGAAGTAAAACGAA TERM 926 787168 - 787129 - g 77 -5.4 -4.94262 | opp_overlap 787131 787134, overlap 787125 GATACTAAAAAGAAA TATAATTTAAATTATGAA GAGG TTTATATTTTAAATTATA TTGCGAGAAGTAAAA sarR 787048 - 787392 + | hypothetical protein TERM 927 787412 - 787451 + F 70 -3 -5.24799 | gap 1, opp_overlap 787412, overlap 787405 CGTTTATTCATAAAA GACTTAAGCTTTGAGAGAT TCA ATCTCATTGA-CTTAAGTC TTTTTGTGTTTATAA SH0767 787760 - 788695 + | hypothetical protein TERM 928 788720 - 788747 + F 100 -8.6 -5.63517 | AACTATAGTTTTTAA GTCTTGATCAAT AATT ATTGATTAAGGC TTTTTTATTTCACAA SH0768 788848 - 789765 + | hypothetical protein TERM 929 789806 - 789834 + F 100 -14.1 -5.22039 | opp_overlap 789806 ATTTATGATATTTAA GCTATGATTACAT ATA ATGTAGTCATAGC TTTTTTAAATTTACA TERM 930 789834 - 789806 - f 95 -11.9 -3.14647 | opp_overlap 789806 ATTTATGATATTTAA GCTATGATTACAT ATA ATGTAGTCATAGC TTTTTTAAATTTACA SH0769 789873 - 790820 + | hypothetical protein TERM 931 790822 - 790850 + F 78 -9.1 -3.25719 | opp_overlap 790828, overlap 790824 790828 ATTCTCCTTCTTGAA TGTAAACTTTTTA TTT TATAAAGTTTACA TTAGTGGTATAATCA SH0770 790889 - 791437 + | hypothetical protein TERM 932 791498 - 791512 + G 71 -6.4 -4.08706 | opp_overlap 791485 791498 ATCAATACATAATAT TGCTCA AGA TGGGCA TTTATATCATGAAGA SH0771 791472 - 792236 + | hypothetical protein TERM 933 792283 - 792241 - T 100 -18.7 -4.09923 | opp_overlap 792241 AAGTTAATTAAATAA GCCACAGAGTAGTTTGAAC TAATT ATTCCAACTACTCTGTGGC TTTAATACGTTCAGG TERM 934 792241 - 792283 + T 100 -18 -3.794 | opp_overlap 792241 AAGTTAATTAAATAA GCCACAGAGTAGTTTGAA CTAATTA TTCCAACTACTCTGTGGC TTTAATACGTTCAGG fdhD 793066 - 792272 - | formate dehydrogenase accessory protein modA 793267 - 794061 + | hypothetical protein TERM 935 794285 - 794295 + G 70 -4 -5.0133 | TTTCTCCTAGAAGTG TTGT AGG ACAA TTTTTTGAAAACATA TERM 936 794329 - 794369 + G 100 -13.5 -4.31085 | opp_overlap 794336, overlap 794333 CATCTTCCAGTAGTA TTCACAATGACAGGTGCAG TAA TTGCATCTGTCATTGTTAG TTTTCCGTTAATGTA TERM 937 794333 - 794365 + G 100 -16.5 -3.71792 | opp_overlap 794336, overlap 794329 TTCCAGTAGTATTCA CAATGACAGGTGCAG TAA TTGCATCTGTCATTG TTAGTTTTCCGTTAA TERM 938 794362 - 794336 - g 79 -9.5 -3.38272 | opp_overlap 794333 794329 CAGTAGTATTCACAA TGACAGGTGCA GTAAT TGCATCTGTCA TTGTTAGTTTTCCGT modB 794074 - 794745 + | hypothetical protein modC 794746 - 795351 + | hypothetical protein moeB 795562 - 796566 + | hypothetical protein moaB 796578 - 797084 + | hypothetical protein moaC 797674 - 797192 - | molybdenum cofactor biosynthesis protein C TERM 939 798489 - 798466 - g 86 -10.4 -3.55563 | opp_overlap 798465 ATTTCAGTTGTCAAA GATGCCATGT CAAA ACATGACATC GTAATTACTACGGGT moeA 797737 - 798996 + | hypothetical protein mobB 798993 - 799463 + | hypothetical protein moaE 799471 - 799920 + | molybdopterin converting factor moa moaD 799922 - 800155 + | hypothetical protein mobA 800162 - 800767 + | molybdopterin-guanine dinucleotide biosynthesis protein A moaA 800781 - 801803 + | hypothetical protein TERM 940 801841 - 801811 - f 87 -11.3 -2.58822 | opp_overlap 801811, overlap 801810 801808 GTGGTTAGATAACAT CTCTAGCAATGGT TTATG ACTATTGCTAGAG TTTTTTATTTTTGGA TERM 941 801811 - 801841 + F 100 -14.2 -5.93252 | opp_overlap 801810 801808 801811 GTGGTTAGATAACAT CTCTAGCAATGGTT TAT GACTATTGCTAGAG TTTTTTATTTTTGGA SH0785 802104 - 802457 + | hypothetical protein TERM 942 802562 - 802550 - T 89 -7.7 -5.02074 | CTAGGTTTGAAAAAA GCTTG ATT CAAGC GCATTTTCAAATCAG TERM 943 802633 - 802602 - T 79 -6.6 -4.70046 | opp_overlap 802602 802604, overlap 802604 GACAAAATGATAAAA TAGGCTGAGACA TTTTATTT TGTCCCAGCCTC TTTCTACATATTAAT TERM 944 802631 - 802604 - T 84 -9.2 -3.9392 | opp_overlap 802602 802604, overlap 802602 CAAAATGATAAAATA GGCTGAGACA TTTTATTT TGTCCCAGCC TCTTTCTACATATTA SH0786 803849 - 802644 - | hypothetical protein SH0787 804283 - 803846 - | hypothetical protein TERM 945 804302 - 804320 + H 80 -6 -5.00616 | opp_overlap 804304, overlap 804304 804319 ATACTCCTTCCAAAC AAGTTAGC TTT GCTAACTA TTTTTTGAACAAAAA TERM 946 804318 - 804304 - H 80 -8.6 -3.90922 | opp_overlap 804304 804302 ACTCCTTCCAAACAA GTTAGC TTT GCTAAC TATTTTTTGAACAAA TERM 947 804304 - 804318 + H 81 -8.6 -4.13561 | opp_overlap 804304, overlap 804302 ACTCCTTCCAAACAA GTTAGC TTT GCTAAC TATTTTTTGAACAAA TERM 948 804778 - 804768 - g 90 -4 -5.87996 | GAATTAATAAAAAAA TCTT TAG AAGA ACGTAACATTGATAC SH0788 804462 - 805223 + | hypothetical protein SH0789 805290 - 805406 + | hypothetical protein fmtB 805634 - 806893 + | FmhB protein, methicillin resistant factor TERM 949 809484 - 809471 - g 74 -6.7 -4.45151 | AATATGGAATTAAAA TCACC AACA GGTGA AACGGTAAAACTTAA SH0791 807032 - 810214 + | hypothetical protein TERM 950 810294 - 810237 - T 100 -13.8 -2.62515 | gap 1, opp_overlap 810237, overlap 810242 AAGCCTGGGACATTA TGATATGCTCCCTTCAAAGTTTTCATT TTTTT AATGTTTACTTTGAAGGG-GCATATCA TTAATCAATGACTCA TERM 951 810237 - 810294 + T 100 -13.8 -3.18912 | gap 1, opp_overlap 810237 810242 AAGCCTGGGACATTA TGATATGCTCCCTTCAAAGTTTTCATT TTTTT AATGTTTACTTTGAAGGG-GCATATCA TTAATCAATGACTCA SH0792 810671 - 810354 - | hypothetical protein SH0793 810984 - 810817 - | hypothetical protein SH0794 811124 - 812032 + | hypothetical protein TERM 952 812048 - 812077 + T 100 -11.6 -4.75372 | opp_overlap 812048 ATAAATATGAAAAAA GCAAGCAATTCT ACTTTA AGGATTGCTTGC TTTTTACTGCATAGT TERM 953 812077 - 812048 - T 100 -9.4 -5.34055 | opp_overlap 812048 ATAAATATGAAAAAA GCAAGCAATTCT ACTTTA AGGATTGCTTGC TTTTTACTGCATAGT SH0795 812893 - 812102 - | hypothetical protein SH0796 813783 - 812920 - | hypothetical protein TERM 954 813944 - 813908 - R 91 -4 -6.01187 | opp_overlap 813908 813909 AAGTAAATAAAAAAA GCATATTAAGAT TTAATGTGTAATT ATCTTAATATGC TTTAATGGTATGCTA SH0797 814829 - 813957 - | hypothetical protein topB 814978 - 817113 + | DNA topoisomerase III TERM 955 818522 - 818487 - g 80 -2.7 -5.67063 | opp_overlap 818493 CTTATCACAAAAAAA CACAAAGAAGTACAT CCAATT ATGTATTTCTTAATG GTACTATTTATTTTA SH0799 817404 - 818561 + | xanthine/uracil permease family protein TERM 956 818604 - 818566 - T 100 -12.7 -2.78371 | gap 1, opp_overlap 818571, overlap 818571 TACACGGTTAATAAG GAAAAGGACGATG-CTCT ATTA AGAGACATCGTCCTTTTT TTACCATTTATTTGA TERM 957 818599 - 818571 - T 100 -12.6 -4.56133 | gap 1, opp_overlap 818571, overlap 818566 GGTTAATAAGGAAAA GGACGATG-CTCT ATTA AGAGACATCGTCC TTTTTTTACCATTTA TERM 958 818571 - 818599 + T 100 -12.6 -5.49809 | gap 1, opp_overlap 818571 818566 GGTTAATAAGGAAAA GGACGATG-CTCT ATTA AGAGACATCGTCC TTTTTTTACCATTTA SH0800 819000 - 818605 - | hypothetical protein TERM 959 819238 - 819198 - H 82 -6.4 -5.06735 | gap 1, opp_overlap 819197 GACAAAGTACAAAAA GTTACA-GAAAAACCTTGA TTTA TCACCGTTTTTCCTGTAAC ATATCTAATGTTGGA rpsJ 819378 - 819686 + | 30S ribosomal protein S10 rplC 819714 - 820376 + | 50S ribosomal protein L3 rplD 820403 - 821026 + | 50S ribosomal protein L4 rplW 821026 - 821301 + | 50S ribosomal protein L23 rplB 821341 - 822174 + | 50S ribosomal protein L2 rpsS 822239 - 822517 + | 30S ribosomal protein S19 rplV 822545 - 822898 + | 50S ribosomal protein L22 rpsC 822922 - 823575 + | 30S ribosomal protein S3 rplP 823578 - 824012 + | 50S ribosomal protein L16 TERM 960 824137 - 824120 - g 73 -7.7 -3.889 | GTCAATTAGAGGAAA CTGCACG TATT CGTACAG TTAGAAAAACAATTG rpmC 824002 - 824211 + | 50S ribosomal protein L29 rpsQ 824238 - 824501 + | 30S ribosomal protein S17 rplN 824533 - 824901 + | 50S ribosomal protein L14 rplX 824937 - 825254 + | 50S ribosomal protein L24 rplE 825280 - 825819 + | 50S ribosomal protein L5 rpsN 825842 - 826027 + | 30S ribosomal protein S14 TERM 961 826212 - 826202 - g 74 -5.4 -4.7254 | AGGTTTCATTAAAAA CGTA GAA TACG TTGAAGATGATAAAC rpsH 826059 - 826457 + | 30S ribosomal protein S8 rplF 826482 - 827018 + | 50S ribosomal protein L6 rplR 827050 - 827412 + | 50S ribosomal protein L18 TERM 962 827632 - 827619 - g 73 -3.8 -5.18357 | GAAGCTATCAAAAAA GCTG TTGAAG CAGC TAAAAAAGATTTAGT rpsE 827433 - 827933 + | 30S ribosomal protein S5 rpmD 827950 - 828129 + | 50S ribosomal protein L30 rplO 828149 - 828589 + | 50S ribosomal protein L15 TERM 963 829846 - 829828 - g 87 -10.4 -3.89412 | ATTGAAACTATGAAA TCACTTGA AGC TCAAGTGA GTCAAAAAGAATATA secY 828589 - 829881 + | preprotein translocase subunit SecY adk 829900 - 830550 + | adenylate kinase TERM 964 830801 - 830779 - g 71 -7.8 -3.54109 | opp_overlap 830785 GTAATTGAATTAGAA GGTACAGTAT TAG ATACTTTACC AAATGCTATGTTTAA SH0824 830749 - 830967 + | translation initiation factor IF-1 rpmJ 830999 - 831112 + | 50S ribosomal protein L36 rpsM 831135 - 831500 + | 30S ribosomal protein S13 TERM 965 831800 - 831784 - g 76 -6.5 -4.46404 | overlap 831785 GAAGTAACAGTAAAA GGACCTG GAC CAGGTCG TGAATCAGCTATCCG TERM 966 831799 - 831785 - g 79 -10 -3.26758 | overlap 831784 AAGTAACAGTAAAAG GACCTG GAC CAGGTC GTGAATCAGCTATCC rpsK 831523 - 831912 + | 30S ribosomal protein S11 rpoA 831996 - 832940 + | DNA-directed RNA polymerase subunit alpha rplQ 832962 - 833333 + | 50S ribosomal protein L17 TERM 967 833596 - 833617 + F 75 -5.3 -4.88222 | ATCGCATTAGTTGAC CTAAATGAA AGCT TTTATTTAG TTTTTCAGTTTTAGT TERM 968 833645 - 833685 + F 74 -4.8 -5.12068 | gap 2 AGTCATCCTTAATAG GGGGCAGGACAATGGATTCG AAA TGAATTC-T-GTCCGGTCCC TTTTTATTGGCTCTA TERM 969 833738 - 833708 - f 100 -16.4 -4.30719 | opp_overlap 833708 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 970 833708 - 833738 + F 100 -14.2 -5.20783 | opp_overlap 833708 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 971 833881 - 833867 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 972 835112 - 835144 + G 81 -10.7 -2.63089 | opp_overlap 835113, overlap 835111 835109 GTCAACAACAAAAAA AGAGATTAAACAACC TAA GGTTGCTTAATCTCA ATATTTGGACTCATC TERM 973 835143 - 835113 - g 100 -16.4 -5.95946 | opp_overlap 835112 835111 835109 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTTGGACTCAT tnp 833823 - 835139 + | transposase for ISSha1 SH0831 835274 - 836086 + | cobalt transporter ATP-binding subunit SH0832 836083 - 836946 + | cobalt transporter ATP-binding subunit TERM 974 837031 - 837043 + G 74 -3.5 -5.22794 | ATTTGTATTTATGTT TATTA TTT TAATA TTTTTTGCTCATTCT SH0833 836936 - 837742 + | hypothetical protein TERM 975 838286 - 838313 + G 71 -3.4 -5.02502 | CCAAACAGATGAAGG GTTTGACTATGT TGTG ACAGGGTCAGGC TTTTTATATAATATG truA 837747 - 838550 + | tRNA pseudouridine synthase A TERM 976 838546 - 838533 - f 71 -3.9 -5.05782 | ATTCATCGTAAAAAA TCATT ACAA AATGA CTAAATTGCATTGAC rplM 838803 - 839240 + | 50S ribosomal protein L13 rpsI 839260 - 839652 + | 30S ribosomal protein S9 TERM 977 839696 - 839715 + F 78 -9.4 -3.06162 | opp_overlap 839700, overlap 839675 839700 TACAAGTTCTGTATG CAAATTGC GTCA GCAATTTG TGTTCAACTGAAATG TERM 978 839737 - 839760 + F 91 -7.5 -5.37043 | opp_overlap 839737 ACTGAAATGTTTAAA GCACTTTTC AATTTC GAGAAGTGC TTTTTTGTATGCAAT TERM 979 839871 - 839859 - g 88 -7.7 -5.02074 | CTAGGTTTGAAAAAA GCTTG ATT CAAGC GCATTTTCAAATCAG SH0837 839765 - 839905 + | hypothetical protein TERM 980 839942 - 839911 - T 79 -6.6 -4.70046 | opp_overlap 839911 839913, overlap 839913 GACAAAATGATAAAA TAGGCTGAGACA TTTTATTT TGTCCCAGCCTC TTTTGAACTTTATAT TERM 981 839913 - 839940 + T 71 -7 -3.72407 | opp_overlap 839911 839913, overlap 839911 CAAAATGATAAAATA GGCTGAGACA TTTTATTT TGTCCCAGCC TCTTTTGAACTTTAT TERM 982 839940 - 839913 - T 84 -9.2 -3.9392 | opp_overlap 839913 839911, overlap 839911 CAAAATGATAAAATA GGCTGAGACA TTTTATTT TGTCCCAGCC TCTTTTGAACTTTAT SH0838 840689 - 839958 - | NAD-dependent deacetylase TERM 983 840886 - 840902 + H 73 -5.2 -4.7373 | TATAAAAAATCAATT GTTCTT ATAAA AAGAAC TTTTTAATAAAATAG lacR 840938 - 841693 + | lactose phosphotransferase system repressor TERM 984 841729 - 841770 + F 95 -11.1 -4.44448 | opp_overlap 841730 841732, overlap 841732 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 985 841769 - 841730 - f 100 -12.4 -4.07562 | opp_overlap 841729 841732, overlap 841732 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 986 841732 - 841767 + F 100 -17.2 -4.33281 | opp_overlap 841732 841730, overlap 841729 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 987 841767 - 841732 - f 100 -15 -3.62348 | opp_overlap 841729 841732, overlap 841730 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0840 841740 - 841889 + | hypothetical protein TERM 988 842105 - 842089 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 989 842859 - 842873 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG tnp 842012 - 843580 + | IS1272 transposase TERM 990 843569 - 843601 + F 79 -5.1 -5.55698 | opp_overlap 843569 AAAATTTATAAAAAA GACAATTTCTA AATTATTTCAA TAGAAATTGTC TTTTTTTCACTTATC TERM 991 843601 - 843569 - f 77 -5.1 -5.35222 | opp_overlap 843569 AAAATTTATAAAAAA GACAATTTCTA AATTATTTCAA TAGAAATTGTC TTTTTTTCACTTATC lacA 843832 - 844260 + | galactose-6-phosphate isomerase subunit LacA TERM 992 844700 - 844684 - g 83 -2.4 -5.92399 | opp_overlap 844684 GAAGAAAATAAAAAA TTAATT GCTAA AATTAA TCATTTGGAAGCACA lacB 844276 - 844791 + | galactose-6-phosphate isomerase subunit LacB lacC 844804 - 845736 + | tagatose-6-phosphate kinase TERM 993 846556 - 846518 - g 71 -6.8 -4.19336 | opp_overlap 846526 AATTATTCCAAGAAA CATTAACATTTGCACATG ATG CAGGTGCACATTTCAATG GTGTGTTATGTGGGC lacD 845740 - 846717 + | tagatose 1,6-diphosphate aldolase lacF 846737 - 847051 + | PTS system, lactose-specific IIA component TERM 994 848378 - 848359 - g 74 -2.2 -5.54338 | GAATTAAAAGAAAAA GTATCA GCAAACTT TGATAC GAAAAAAGCAGATGC TERM 995 848408 - 848386 - g 84 -6.2 -5.21709 | overlap 848405 TTTGATACGAAAAAA GCAGATGCAA TTT TAGCAACTGC TGGTGCAAATGAAAC lacE 847057 - 848808 + | PTS system, lactose-specific IIBC component lacG 848827 - 850236 + | 6-phospho-beta-galactosidase TERM 996 850285 - 850334 + F 100 -11.1 -5.5074 | gap 1, opp_overlap 850292 850303 850304, overlap 850290 TGATAGATACAATTG TAAGGTAGGATTGGGAAATGCTAA AAT TTAGCTTTTCTCAGTCCTAT-TTA TTTTTTCTTGGCTTG TERM 997 850290 - 850330 + F 100 -15.7 -5.20735 | opp_overlap 850292 850303 850304, overlap 850285 GATACAATTGTAAGG TAGGATTGGGAAATGCTAA AAT TTAGCTTTTCTCAGTCCTA TTTATTTTTTCTTGG TERM 998 850328 - 850292 - f 75 -9.5 -2.55551 | opp_overlap 850290 850285, overlap 850303 850304 TACAATTGTAAGGTA GGATTGGGAAATGCTAA AAT TTAGCTTTTCTCAGTCC TATTTATTTTTTCTT SH0849 850482 - 850697 + | hypothetical protein SH0850 850811 - 851332 + | hypothetical protein SH0851 852373 - 851372 - | hypothetical protein TERM 999 853243 - 853256 + G 71 -6.7 -4.11216 | CCTAGAGGTCATATT GCTAC TATT GTAGC TTTTGAAAATGACCA SH0852 852517 - 853527 + | hypothetical protein opuD 853647 - 855197 + | hypothetical protein SH0854 855374 - 855910 + | hypothetical protein SH0855 855923 - 856162 + | hypothetical protein asp23 856226 - 856756 + | hypothetical protein TERM 1000 856838 - 856806 - T 93 -8 -5.1925 | opp_overlap 856806 GGATAAGTGAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 1001 856806 - 856838 + T 93 -8 -5.35222 | opp_overlap 856806 GGATAAGTGAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT tnp 858430 - 857099 - | IS1272 transposase TERM 1002 857544 - 857530 - G 77 -5.8 -4.75289 | CATTATAAGATAAAA CAAATT GGG AATTTG TCGCTATTTGTAAAT TERM 1003 858298 - 858314 + g 70 -8.1 -3.32066 | CACCACGGTGATGTC TGAATTC GTC GAATTCA TTGTCAGGAATTGTT SH0858 858663 - 858514 - | hypothetical protein TERM 1004 858674 - 858633 - G 100 -11.1 -4.44448 | opp_overlap 858634 858636, overlap 858636 AGTATTGTAAATAAA GAAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTAT TTCTCTAGGGTTTAT TERM 1005 858634 - 858673 + g 100 -12.4 -4.07562 | opp_overlap 858633 858636, overlap 858636 GTATTGTAAATAAAG AAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTA TTTCTCTAGGGTTTA TERM 1006 858671 - 858636 - G 100 -17.2 -4.33281 | opp_overlap 858636 858634, overlap 858633 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT TERM 1007 858636 - 858671 + g 100 -15 -3.62348 | opp_overlap 858633 858636, overlap 858634 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT SH0859 860690 - 858741 - | hypothetical protein TERM 1008 860768 - 860746 - H 74 -8.6 -3.29558 | opp_overlap 860746, overlap 860744 GTATAATCCATAATA TCGATAATGA TAT TCATTATCAA TTATAAATATTATTA TERM 1009 861036 - 861062 + G 76 -4.4 -5.06414 | opp_overlap 861044, overlap 861036 861040 861044 TCATCTTCATTTTTA GTGACAAGCACA TTA TGTGTTTGTACC TTTTTATTAGAACAA TERM 1010 861888 - 861874 - g 73 -7.2 -4.01853 | opp_overlap 861873 861870, overlap 861862 CAACATTATCAGAAA TAATGG GAC CCATTA ATACATTTATCACCA SH0860 860805 - 861974 + | hypothetical protein SH0861 861978 - 863738 + | hypothetical protein SH0862 863739 - 864806 + | hypothetical protein TERM 1011 865910 - 865896 - g 76 -2.7 -5.46129 | CAAGAAATGAAAAAA GACCC GGTTT GGGAC ACATTAGATGCGGTT SH0863 865047 - 866045 + | hypothetical protein TERM 1012 866083 - 866059 - g 74 -5.8 -4.64334 | opp_overlap 866058 AAGGTGGCAATAAAA TGACTATTAG ATCTA CTGATAGTCA ATCTGCTTTAGACAA TERM 1013 866108 - 866148 + G 86 -4.9 -5.63236 | gap 2, opp_overlap 866121, overlap 866113 AGACAAAGCAAATAA GAGGCGCACTACACTCACA TTTAT TGTGAGTG-GGTGC-TTTC TTTTTATTTTTGCAT TERM 1014 866113 - 866144 + G 100 -10.3 -5.21459 | gap 1, opp_overlap 866121, overlap 866108 AAGCAAATAAGAGGC GCACTACACTCACA TTTAT TGTGAGTG-GGTGC TTTCTTTTTATTTTT SH0864 866058 - 867089 + | hypothetical protein SH0865 867086 - 868051 + | hypothetical protein TERM 1015 868062 - 868099 + F 89 -7.9 -5.10767 | opp_overlap 868062 TTTAATGAAATTCAA GAGCTAATTATTCTCAT ATTT ATGATGAAAATTAGCTC TTTTTATATTGCATA TERM 1016 868444 - 868388 - f 74 -6.1 -4.55697 | gap 1, opp_overlap 868388 868404, overlap 868389 868391 ATGGTGAGAAACAAA CTACATTACCT-GTAGCCTTTTTAGC AAATTG GCTAAAAGGTCTACTAGGTGATGCAA TGCCAATTATTATAA SH0866 868444 - 869637 + | hypothetical protein SH0867 870028 - 869714 - | heme-degrading monooxygenase IsdG TERM 1017 870155 - 870103 - R 73 -8.9 -2.51642 | gap 1, opp_overlap 870103 870116, overlap 870116 ACAGTATTTATTAAT TTAGATTAAAAAACTGTCAACTAC ATAGCG GAAGTTGACAGTTTTTTA-TATAA CTTTGCGAATGAAAA TERM 1018 870103 - 870155 + r 73 -8.9 -2.74144 | gap 1, opp_overlap 870103 870116, overlap 870116 ACAGTATTTATTAAT TTAGATTAAAAAACTGTCAACTAC ATAGCG GAAGTTGACAGTTTTTTA-TATAA CTTTGCGAATGAAAA TERM 1019 870143 - 870116 - R 100 -8.5 -5.22312 | opp_overlap 870103 870116, overlap 870103 ATTTAGATTAAAAAA CTGTCAACTAC ATAGCG GAAGTTGACAG TTTTTTATATAACTT TERM 1020 870116 - 870143 + r 100 -8.5 -5.38951 | opp_overlap 870116 870103, overlap 870103 ATTTAGATTAAAAAA CTGTCAACTAC ATAGCG GAAGTTGACAG TTTTTTATATAACTT SH0868 870444 - 870184 - | hypothetical protein SH0869 870621 - 871139 + | hypothetical protein SH0870 871195 - 872382 + | hypothetical protein SH0871 872399 - 873082 + | hypothetical protein TERM 1021 873094 - 873126 + F 82 -2.8 -5.95539 | TTAGAGAATTTAAAA TAGGGTTGATGATT TTATC GGTCATCAGTCTTA TTTTTTTATTTAAGG SH0872 873222 - 874550 + | hypothetical protein TERM 1022 874768 - 874804 + G 100 -7.5 -5.78622 | ATTTTTTTAATGTTT TTAGGATTTGGTTTATT TGG ATTAAGTCGAATCCTAA TTTTTTTTAAGCTAG SH0873 874675 - 875142 + | hypothetical protein TERM 1023 875149 - 875171 + F 75 -7.8 -3.93288 | opp_overlap 875142 875143 875149 AAGAAATAGCAAGCA TTTAGTTTGC TTG GCATACTAAA TTTGGTTGGATAAAA SH0874 875217 - 876668 + | hypothetical protein TERM 1024 876683 - 876713 + F 100 -6.9 -5.82281 | opp_overlap 876686 AATCTGATATTGATA GAAGTTAGCCAAC AAATA GTGAGCTAACTTC TTTTTTTATATATTT SH0875 876813 - 877880 + | hypothetical protein TERM 1025 877909 - 877955 + F 90 -8.4 -4.65895 | gap 1, opp_overlap 877918, overlap 877918 GTAAAATTGAGGTTC TATAATAAATTGGACTGATGA CAAAAT TCATCAGTCCAATTT-TCATG TTTTTGAATAGAAAA TERM 1026 877947 - 877918 - f 100 -13.8 -4.30987 | opp_overlap 877909 877918 AGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTCATGTTTTTGA TERM 1027 877918 - 877947 + F 100 -13.8 -4.60746 | opp_overlap 877918, overlap 877909 AGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTCATGTTTTTGA TERM 1028 878388 - 878372 - g 73 -4.5 -4.88918 | TTATTTCAAATAAAA CAAAACT TGC AGTTTTA AATAAAGCACAAGAA TERM 1029 879355 - 879325 - g 100 -16.4 -5.95946 | opp_overlap 879323 879333 879334 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTAGGACTCAT tnp 878035 - 879351 + | transposase for ISSha1 TERM 1030 879403 - 879427 + F 100 -12.3 -5.47159 | opp_overlap 879400 GAGCCAAAATATTGA CGCATGGAATT TTG AATTTCATGCG TTTTTTCTATTGCAA TERM 1031 880470 - 880452 - f 70 -8.8 -2.75963 | overlap 880451 AGTCTGATGTGAAAG CCCACGGC TCA ACCGTGGA GGGTCATTGGAAACT TERM 1032 881676 - 881726 + F 100 -13.7 -3.28745 | gap 1, opp_overlap 881677 881679 881680, overlap 881673 881679 CTCACAAGATTAATA AC-AGGTTTCTACCATATTAGAAC TCAC GTTCTAATATGGTAGAAACATAGA TTAAGTTATTAAGGG TERM 1033 881724 - 881677 - f 100 -19.6 -3.84271 | opp_overlap 881676 881673 881679, overlap 881679 881680 TCACAAGATTAATAA CAGGTTTCTACCATATTAGAAC TCAC GTTCTAATATGGTAGAAACATA GATTAAGTTATTAAG TERM 1034 881679 - 881722 + F 100 -20 -2.58699 | opp_overlap 881677 881679 881680, overlap 881676 881673 ACAAGATTAATAACA GGTTTCTACCATATTAGAAC TCAC GTTCTAATATGGTAGAAACA TAGATTAAGTTATTA TERM 1035 881722 - 881679 - f 100 -20 -3.49771 | opp_overlap 881679 881676 881673, overlap 881677 881680 ACAAGATTAATAACA GGTTTCTACCATATTAGAAC TCAC GTTCTAATATGGTAGAAACA TAGATTAAGTTATTA TERM 1036 881721 - 881680 - f 100 -23.5 -2.68778 | opp_overlap 881679 881676 881673, overlap 881679 881677 CAAGATTAATAACAG GTTTCTACCATATTAGAAC TCAC GTTCTAATATGGTAGAAAC ATAGATTAAGTTATT TERM 1037 882019 - 882000 - f 84 -9.4 -3.66803 | opp_overlap 881999 881998 CGGGAAGAGCCCAAA CCAATAAG CTTG CTTATTGG GGTTGTAGGACACTC TERM 1038 884913 - 884926 + F 71 -8.1 -3.14881 | TCGAATCCTACCTGC GGAGC CATG GCTCC TTGGTCAAGCGGTTA TERM 1039 885335 - 885354 + F 100 -12.2 -5.63504 | ATGGCTCACTTATTA GCACTCCT GTAT AGGAGTGC TTTTTTTATAAAATT TERM 1040 886170 - 886156 - g 85 -8.6 -4.19276 | CTAAAATTTCTAAAA GTCTAG GAA CTAGAC ATAGAGCTGCAGTGG SH0877 885549 - 886355 + | hypothetical protein SH0878 886357 - 887289 + | hypothetical protein femD 887314 - 888666 + | phosphoglucosamine-mutase TERM 1041 888695 - 888728 + F 88 -5.5 -5.63374 | gap 1 ACAATTTTCGTTTTC CTTCAAAGTT-TACAT TTA ATGTGTAGCTTTGGAG TTTTTTTAATATTAA TERM 1042 889133 - 889116 - f 75 -7.1 -4.21194 | GCTTATTATTTAAAA CATTTAG GTAA CTAAATG CACAAAAATAATAAG TERM 1043 889512 - 889501 - g 70 -4.4 -4.81852 | overlap 889502 GCAGAATTAAGAAAA GTTG CTGA CAAC AATGACACTGATGGT TERM 1044 889716 - 889733 + G 70 -7.1 -3.85698 | opp_overlap 889715 AGATACAGAAGTTAT TGTTCAA TTAG TTGAACA TTTCTCGAACAAAGG TERM 1045 890672 - 890638 - g 70 -7.2 -3.73386 | overlap 890645 AGAGAATTAGCTAAA GTAACAACTGCAATTG AAA CAATTGTAGATGATAC TCCAGTAATGGAACA TERM 1046 890665 - 890645 - g 73 -6.9 -3.90425 | overlap 890638 TAGCTAAAGTAACAA CTGCAATTG AAA CAATTGTAG ATGATACTCCAGTAA glmS 889333 - 891138 + | D-fructose-6-phosphate amidotransferase TERM 1047 891261 - 891299 + F 91 -4.2 -6.02919 | gap 2 TAGTTACCCTAGTGG GAGCAAGATATTAAATTC ATTAA GAATTTGA--TCTTGCTC TTTTTTTATTTGTAA SH0881 891397 - 892179 + | hypothetical protein SH0882 892245 - 893105 + | hypothetical protein TERM 1048 893149 - 893190 + F 95 -11.1 -4.44448 | opp_overlap 893150 893152, overlap 893152 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 1049 893189 - 893150 - f 100 -12.4 -4.07562 | opp_overlap 893149 893152, overlap 893152 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 1050 893152 - 893187 + F 100 -17.2 -4.33281 | opp_overlap 893150 893152, overlap 893149 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1051 893187 - 893152 - f 100 -15 -3.62348 | opp_overlap 893152 893149, overlap 893150 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0883 893160 - 893309 + | hypothetical protein TERM 1052 893525 - 893509 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG tnp 893393 - 893884 + | IS1272 transposase TERM 1053 894278 - 894292 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG tnp 893881 - 894669 + | IS1272 transposase TERM 1054 895020 - 894988 - T 93 -8 -5.35222 | opp_overlap 894988 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 1055 894988 - 895020 + T 95 -8 -5.55698 | opp_overlap 894988 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC SH0886 896186 - 895068 - | hypothetical protein TERM 1056 895179 - 895195 + g 74 -2.3 -5.5604 | ATTGTTTTTAGAAGG TTGATGA GTA TTGTCAA TTTTTTGTTGATTAC SH0887 896318 - 897049 + | hypothetical protein TERM 1057 897105 - 897061 - T 86 -7.4 -5.06103 | gap 2, opp_overlap 897060 897063 897102, overlap 897063 ATAAGTTGTAAAAAA TAGGGGTTAGACA--GAATTCA ATT CGAATTCAACGTCTAACCCCTG ATTAATTTTTAATAG TERM 1058 897103 - 897063 - T 91 -10 -4.15235 | gap 2, opp_overlap 897063 897060 897102, overlap 897061 AAGTTGTAAAAAATA GGGGTTAGACA--GAATTCA ATT CGAATTCAACGTCTAACCCC TGATTAATTTTTAAT SH0888 898077 - 897127 - | hypothetical protein SH0889 898399 - 898070 - | hypothetical protein SH0890 898543 - 899199 + | hypothetical protein SH0891 899533 - 900465 + | hypothetical protein SH0892 900519 - 900749 + | hypothetical protein TERM 1059 900761 - 900804 + F 100 -11.4 -4.60255 | gap 1, opp_overlap 900759 TTAAATTAATGCATA GGGGAATATTTAGAAT-TATT AAT AATGGATTCTGAATGTTCCCC TTTTTAGCAACTTAT TERM 1060 901798 - 901811 + G 71 -6.7 -4.09739 | opp_overlap 901797 ATGAGTAATAATGAT GGTGT GAAA ACACC TTTTGAAACAATTAA TERM 1061 901846 - 901832 - g 85 -4.3 -5.73672 | overlap 901838 AAACAATTAAAAAAA CTGAA ATTGA TTCAG CAAGTCATGATGATT SH0893 900976 - 902349 + | hypothetical protein TERM 1062 902365 - 902390 + F 100 -9.8 -5.17786 | opp_overlap 902365 CTTAAGATAACTAAA CCTGAGACGT TTTACT ATGTCTCAGG TTTTTAATTTTATTA TERM 1063 902390 - 902365 - f 77 -7.6 -4.08221 | opp_overlap 902365 CTTAAGATAACTAAA CCTGAGACGT TTTACT ATGTCTCAGG TTTTTAATTTTATTA TERM 1064 902917 - 902897 - g 77 -8.5 -3.58177 | opp_overlap 902916 CATAATCCAAATGAA TATGAAAAA TCC TTTTTCATA GATGATAAACGCATC SH0894 902540 - 902935 + | hypothetical protein TERM 1065 903098 - 903087 - f 70 -3 -5.28778 | opp_overlap 903087 ATTAGTGATAAAAAA GTTA AGCA TAAC TATTTACAGATTATA SH0895 903180 - 903620 + | hypothetical protein TERM 1066 903630 - 903672 + T 89 -10.1 -3.72396 | opp_overlap 903635, overlap 903635 GTTTAATTAATATAT AAAAAGGTGCTTGAGAT TTCATTATC GTCTCAAGCACCTTTTA TTATCTATTAGTATT TERM 1067 903667 - 903635 - T 100 -9.3 -5.10968 | opp_overlap 903630 903635 ATTAATATATAAAAA GGTGCTTGAGA TTTCATTATCG TCTCAAGCACC TTTTATTATCTATTA TERM 1068 903635 - 903667 + T 100 -10 -4.90002 | opp_overlap 903635, overlap 903630 ATTAATATATAAAAA GGTGCTTGAGAT TTCATTATC GTCTCAAGCACC TTTTATTATCTATTA deoD 904403 - 903693 - | purine nucleoside phosphorylase TERM 1069 905021 - 904990 - g 73 -8.8 -3.26596 | opp_overlap 904999 905000 GTTAAAGCAAGTGAA TTAGCGAAAGCAGC TGGT GCTGATTTCGTTAA AACATCAACTGGTTT dra 904570 - 905232 + | deoxyribose-phosphate aldolase deoA 905294 - 906595 + | pyrimidine-nucleoside phosphorylase drm 906607 - 907794 + | phosphopentomutase SH0900 907794 - 908144 + | hypothetical protein TERM 1070 908199 - 908154 - T 100 -12.9 -4.94487 | opp_overlap 908160, overlap 908155 908160 TTATAAAAGAGAAAA GTAAAACCACCAATACTTAAA TATA CTTAAGTATTGGTGGTTTTTA TTTTAAATATGAAAT TERM 1071 908198 - 908155 - T 100 -16.4 -3.55066 | opp_overlap 908160, overlap 908154 908160 TATAAAAGAGAAAAG TAAAACCACCAATACTTAAA TATA CTTAAGTATTGGTGGTTTTT ATTTTAAATATGAAA TERM 1072 908193 - 908160 - T 100 -16.3 -4.76874 | opp_overlap 908160, overlap 908155 908154 AAGAGAAAAGTAAAA CCACCAATACTTAAA TATA CTTAAGTATTGGTGG TTTTTATTTTAAATA TERM 1073 908160 - 908193 + T 100 -15.6 -5.48213 | opp_overlap 908160 908155 908154 AAGAGAAAAGTAAAA CCACCAATACTTAA ATATAC TTAAGTATTGGTGG TTTTTATTTTAAATA SH0901 908685 - 908215 - | S-ribosylhomocysteinase hmrA 908941 - 910125 + | hypothetical protein SH0903 910122 - 911315 + | hypothetical protein SH0904 911571 - 912236 + | hypothetical protein TERM 1074 912370 - 912341 - T 90 -10.9 -3.62032 | opp_overlap 912341 AGATGAATTGTTAAA CCCTTAATCAC ATCTTTTG GTGATTAAGGG TTTTTTATAAATATT TERM 1075 912341 - 912370 + T 100 -10.9 -5.30686 | opp_overlap 912341 AGATGAATTGTTAAA CCCTTAATCAC ATCTTTTG GTGATTAAGGG TTTTTTATAAATATT SH0905 913194 - 912394 - | pantothenate kinase TERM 1076 913201 - 913211 + H 73 -5.4 -4.63586 | GACTTTCATTCTAGT TCAC CTC GTGA TTTTATATGTCATAT TERM 1077 913352 - 913336 - H 70 -2.3 -5.48303 | opp_overlap 913336 ATAAGTGTAAAAAAA CAATTAT AAT AAAATTG ATTAATTAAAAGAGG SH0906 913385 - 914245 + | hypothetical protein rpoE 914360 - 914878 + | DNA-directed RNA polymerase subunit delta TERM 1078 914886 - 914908 + F 82 -9.4 -3.41708 | opp_overlap 914885 914892, overlap 914892 AAGACTAAGAAGATT TTAAAACTAA ATT TTAGTTTTAA TTGACTTTTACTTAA TERM 1079 914980 - 915012 + F 100 -9.2 -6.20267 | gap 1, opp_overlap 914964 914981, overlap 914981 GTGTATAAATCATAT ACGCTCCC-CTTACA GATA TGTGAGAGGGAGCGA TTTTTTTATTTTTCA TERM 1080 914981 - 915011 + F 100 -12.7 -4.285 | gap 1, opp_overlap 914964 914981, overlap 914980 TGTATAAATCATATA CGCTCCC-CTTACA GATA TGTGAGAGGGAGCG ATTTTTTTATTTTTC TERM 1081 915011 - 914981 - f 84 -10.5 -3.08467 | gap 1, opp_overlap 914981 914980, overlap 914964 TGTATAAATCATATA CGCTCCC-CTTACA GATA TGTGAGAGGGAGCG ATTTTTTTATTTTTC ctrA 915094 - 916701 + | CTP synthetase TERM 1082 916711 - 916748 + T 100 -13.7 -4.48072 | gap 1, opp_overlap 916711 AAATAATATAATAAA TCAACCCTTACGT-ACTG AAA TGGTGACGTAAGGGTTGA TTTTATAATGAATAT TERM 1083 916748 - 916711 - T 100 -12.3 -4.53119 | gap 1, opp_overlap 916711 AAATAATATAATAAA TCAACCCTTACGT-AC TGAAATG GTGACGTAAGGGTTGA TTTTATAATGAATAT SH0909 917297 - 916776 - | hypothetical protein TERM 1084 918177 - 918158 - g 70 -4.2 -4.75356 | AAAGACATTCAAAAA GCAATCCC TTAT GGTACTGC TAAAATTAATGTTAA fbaA 917498 - 918355 + | fructose-bisphosphate aldolase TERM 1085 918411 - 918384 - f 70 -8.5 -2.71483 | opp_overlap 918385 AGATGTTTTGAACTA GGAGTGAAACG TTAAGT CGTTTCACTCT TTTTCTTTATAATTT TERM 1086 918385 - 918410 + F 100 -12 -5.4182 | opp_overlap 918384 GATGTTTTGAACTAG GAGTGAAACG TTAAGT CGTTTCACTC TTTTTCTTTATAATT murZ 918638 - 919909 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1087 920387 - 920372 - g 78 -7.6 -4.1585 | GCAGAAGCTTTAAAA CCCATT GAAA AATGGG CTCAAGAACATGTAA SH0912 920096 - 920431 + | hypothetical protein SH0913 920597 - 922027 + | hypothetical protein TERM 1088 922054 - 922096 + F 100 -9.5 -4.64657 | gap 1, opp_overlap 922059, overlap 922059 AATTTATATATTATT TATAACAGTTCATGGAA-TA TTTT TAGTTCCATGAGCTGTTTTA TTTTTGGAAATTTAA TERM 1089 922059 - 922091 + F 100 -9.4 -5.26119 | gap 1, opp_overlap 922059, overlap 922054 ATATATTATTTATAA CAGTTCATGGAA-TA TTTT TAGTTCCATGAGCTG TTTTATTTTTGGAAA rho 922294 - 923610 + | transcription termination factor Rho rpmE2 923730 - 923987 + | 50S ribosomal protein L31 type B tdk 924138 - 924737 + | thymidine kinase prfA 924737 - 925813 + | peptide chain release factor 1 SH0918 925803 - 926636 + | hypothetical protein TERM 1090 926645 - 926676 + F 78 -7.5 -4.41353 | opp_overlap 926645 ATGGTAAAACTCAAA GTTACTTATCTGA TAAAAT TTAGATGAGTAAC TTTTCATATATATGA SH0919 926720 - 927763 + | hypothetical protein SH0920 927760 - 928176 + | hypothetical protein TERM 1091 928229 - 928254 + F 95 -8.4 -4.9755 | opp_overlap 928229 928232 ATAAGTTATAATGAA GAAGTATAGC TAGTTT GCTATGCTTC TTTTTAATTATGTAT SH0921 928287 - 928811 + | hypothetical protein glyA 928838 - 930076 + | serine hydroxymethyltransferase upp 930103 - 930732 + | uracil phosphoribosyl transferase mnaA 930751 - 931884 + | UDP-GlcNAc 2-epimerase SH0925 932039 - 932389 + | hypothetical protein atpB 932417 - 933142 + | F0F1 ATP synthase subunit A atpE 933175 - 933387 + | F0F1 ATP synthase subunit C atpF 933473 - 934003 + | F0F1 ATP synthase subunit B TERM 1092 934243 - 934224 - g 71 -3 -5.1101 | gap 1, overlap 934226 934227 TTATTACTTAAAAAA TATGCTAAT GAT ATTAGC-TA ATAATCGTCATTTAG TERM 1093 934515 - 934501 - g 73 -3.6 -5.03314 | GGCAGTGTTAAAAAA GATTTA GAA CAAATC GAACGCAAATTTAGA atpH 934003 - 934542 + | F0F1 ATP synthase subunit delta atpA 934563 - 936071 + | F0F1 ATP synthase subunit alpha atpG 936103 - 936969 + | F0F1 ATP synthase subunit gamma TERM 1094 937804 - 937820 + G 80 -9.5 -3.64822 | overlap 937795 CGTATGCCTTCAGCT GTAGGTT ATC AACCTAC TTTAGCTACAGAAAT atpD 936991 - 938403 + | F0F1 ATP synthase subunit beta TERM 1095 938716 - 938700 - g 87 -10.9 -3.38564 | overlap 938712 GAAATTGATGTAGAA CGAGCTA AAT TAGCTCG TCAAAGAGCACAATC atpC 938424 - 938825 + | F0F1 ATP synthase subunit epsilon TERM 1096 938862 - 938833 - f 100 -10.9 -5.07971 | opp_overlap 938833 TAAAATAATTAAAAA GGTTTGGAAACTA ACTT TAGTTTTCAAACC TTTTTTATGTTGTAT TERM 1097 938833 - 938862 + F 100 -13.1 -5.53436 | opp_overlap 938833 TAAAATAATTAAAAA GGTTTGGAAACTA ACTT TAGTTTTCAAACC TTTTTTATGTTGTAT SH0934 938953 - 939186 + | hypothetical protein TERM 1098 940216 - 940235 + G 73 -7.2 -3.94877 | opp_overlap 940216, overlap 940217 GATTCCCAACAGATA TGCAATCA CAAA TGATTGCG TTATTATTAACAGCT TERM 1099 940217 - 940234 + G 71 -8.5 -2.96444 | opp_overlap 940216, overlap 940216 ATTCCCAACAGATAT GCAATCA CAAA TGATTGC GTTATTATTAACAGC murA 939291 - 940556 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase fabA 940596 - 941033 + | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase TERM 1100 941137 - 941125 - T 89 -7.7 -5.02074 | CTAGGTTTGAAAAAA GCTTG ATT CAAGC GCATTTTCAAATCAG TERM 1101 941208 - 941176 - T 81 -8.6 -4.2408 | gap 1, opp_overlap 941177 941177 941179, overlap 941177 941179 TGACAAAATGATAAA GTAGGCTGAGACA TTTAATTT TGTCTCAGCCT-C ATTTTTATTCTCTCT TERM 1102 941208 - 941177 - T 73 -8.8 -3.13364 | opp_overlap 941177 941177 941179, overlap 941176 941179 GACAAAATGATAAAG TAGGCTGAGACA TTTAATTT TGTCTCAGCCTC ATTTTTATTCTCTCT TERM 1103 941177 - 941208 + T 78 -8.8 -3.74697 | opp_overlap 941176 941177 941179, overlap 941177 941179 GACAAAATGATAAAG TAGGCTGAGACA TTTAATTT TGTCTCAGCCTC ATTTTTATTCTCTCT TERM 1104 941177 - 941209 + T 91 -7.2 -5.27206 | gap 1, opp_overlap 941176 941177 941179, overlap 941177 941179 GACAAAATGATAAAG T-AGGCTGAGACA TTTAATTT TGTCTCAGCCTCA TTTTTATTCTCTCTC TERM 1105 941179 - 941206 + T 93 -11.4 -3.43245 | opp_overlap 941176 941177 941179, overlap 941177 941177 CAAAATGATAAAGTA GGCTGAGACA TTTAATTT TGTCTCAGCC TCATTTTTATTCTCT TERM 1106 941206 - 941179 - T 91 -11.4 -3.10614 | opp_overlap 941179 941177 941177, overlap 941176 941177 CAAAATGATAAAGTA GGCTGAGACA TTTAATTT TGTCTCAGCC TCATTTTTATTCTCT SH0937 941656 - 941213 - | hypothetical protein TERM 1107 941261 - 941274 + g 71 -5.3 -4.47118 | overlap 941252 TGGTTTTGATTGCAT CATTC GATT GAATG TTATTTTTAACTCTT SH0938 941842 - 942240 + | hypothetical protein TERM 1108 942295 - 942332 + F 93 -11.5 -3.25361 | opp_overlap 942291, overlap 942290 942297 TTTTAATTATACTCA TGGCCTCTCTTATATAA AGAA TTTTATAAGGGAGGCTA TTAAATTATCCATTT TERM 1109 942297 - 942330 + F 95 -11.9 -3.18321 | opp_overlap 942291, overlap 942295 942290 TTAATTATACTCATG GCCTCTCTTATATAA AGAA TTTTATAAGGGAGGC TATTAAATTATCCAT TERM 1110 943201 - 943191 - g 71 -6.8 -4.23674 | CCTGATGAATATAAA GGTG TTT CACC AGCACAAGCTCCTGA SH0939 942579 - 943286 + | hypothetical protein TERM 1111 943341 - 943314 - f 86 -10 -3.53298 | opp_overlap 943314, overlap 943310 ATTATTTTAAAGTAA GAGTGGAACA GTGAATTT TGTTCCACTC TTTTTTGTTTTGTTT TERM 1112 943314 - 943341 + F 100 -10.7 -5.95449 | opp_overlap 943314 943310 ATTATTTTAAAGTAA GAGTGGAACAG TGAATT TTGTTCCACTC TTTTTTGTTTTGTTT TERM 1113 943522 - 943549 + F 95 -7.1 -5.46698 | opp_overlap 943523, overlap 943523 TCTTTATTGAATGAT AGCTACATTTC TACGTT GAAATGTAGCA TTTTTTAATTTTAAG TERM 1114 943523 - 943548 + F 90 -10.6 -3.86392 | opp_overlap 943523, overlap 943522 CTTTATTGAATGATA GCTACATTTC TACGTT GAAATGTAGC ATTTTTTAATTTTAA TERM 1115 943548 - 943523 - f 83 -10.6 -2.92192 | opp_overlap 943523 943522 CTTTATTGAATGATA GCTACATTTC TACGTT GAAATGTAGC ATTTTTTAATTTTAA tenA 943575 - 944264 + | hypothetical protein thiD 944320 - 945078 + | phosphomethylpyrimidine kinase TERM 1116 945705 - 945685 - g 100 -9.1 -4.84914 | ATTTAGAGAAGAAAA TCCAACACT ACA AGTGTTAGA AGAAGCAGTGAGCAT thiM 945071 - 945862 + | hydroxyethylthiazole kinase TERM 1117 946307 - 946292 - g 71 -5.4 -4.64144 | AACAATCTCTAAAAA TGATGC TAAC GCACCA GTAGGTCCATCAATG thiE 945864 - 946502 + | thiamin phosphate synthase SH0944 946591 - 947466 + | lipoprotein precursor TERM 1118 947482 - 947512 + F 100 -14.2 -5.20783 | opp_overlap 947482 AGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1119 947512 - 947482 - f 100 -16.4 -4.30987 | opp_overlap 947482 AGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1120 947655 - 947641 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 1121 948917 - 948887 - g 100 -12.8 -5.95946 | opp_overlap 948886 948885 TCAACAACAAAAAAA GAGATTAAACAACC TAA AGTTGCTTAATCTC AATATTTGGACTCAT tnp 947597 - 948913 + | transposase for ISSha1 SH0946 949603 - 948962 - | hypothetical protein TERM 1122 949385 - 949400 + g 72 -6.2 -4.27467 | TGTTTTTAAACGATC TAAAGC ATTG GCTTTA TTTGTTAACTTATCA SH0947 951187 - 949703 - | hypothetical protein SH0948 951374 - 951667 + | hypothetical protein SH0949 951679 - 951885 + | hypothetical protein TERM 1123 952077 - 952063 - g 80 -2.9 -5.63374 | TGAATATTAAAAAAA CTAAA TCTCG TTTAG ACATTATTAATACAT SH0950 951993 - 952130 + | hypothetical protein TERM 1124 952183 - 952224 + F 95 -11.1 -4.44448 | opp_overlap 952184 952186, overlap 952186 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 1125 952223 - 952184 - f 100 -12.4 -4.07562 | opp_overlap 952183 952186, overlap 952186 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 1126 952186 - 952221 + F 100 -17.2 -4.33281 | opp_overlap 952186 952184, overlap 952183 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1127 952221 - 952186 - f 100 -15 -3.62348 | opp_overlap 952183 952186, overlap 952184 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0951 952194 - 952343 + | hypothetical protein TERM 1128 952559 - 952543 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 1129 953313 - 953327 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 1130 954055 - 954023 - g 90 -8 -5.35222 | opp_overlap 954023 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 1131 954023 - 954055 + G 93 -8 -5.55698 | opp_overlap 954023 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 952427 - 954121 + | IS1272 transposase SH0953 955278 - 954079 - | hypothetical protein ddl 955696 - 956766 + | D-alanyl-alanine synthetase A murF 956782 - 958137 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase TERM 1132 958166 - 958204 + F 80 -4.1 -5.72207 | gap 2, opp_overlap 958177 958185, overlap 958185 TACTATCAATCTAAG CAAGTCACTAATTAGGAAT CTA AATCCT--TTAGTGGCTTG TTTTTTTACTTTAAA SH0956 958408 - 959919 + | hypothetical protein TERM 1133 959950 - 959971 + F 74 -6.6 -4.39318 | opp_overlap 959950 959945 AATTTTATAATCAAA CCATCTCA TGCTTT TGAGGTGG TTTTAAATTTGATTA SH0957 960085 - 960564 + | hypothetical protein SH0958 960557 - 962080 + | hypothetical protein SH0959 962073 - 962600 + | hypothetical protein dpj 962610 - 962969 + | holo-ACP synthase TERM 1134 963791 - 963773 - g 74 -2.4 -5.48213 | TATGTAAAAGAAAAA GTTGAAAC TGA ATTACAAC CAAGTGCGCAATTAT alr1 963065 - 964213 + | alanine racemase 1 SH0962 964299 - 964469 + | hypothetical protein TERM 1135 964579 - 964613 + G 71 -8.7 -3.14132 | gap 1, opp_overlap 964579 964576 964574 TGGTAACAAATATAG TCCT-ACCGTAATCGT TGCT GCGATTACGGGAAGGA TTAATAAAGCGAAAA SH0963 964466 - 964831 + | PemK family DNA-binding protein TERM 1136 964991 - 965013 + F 100 -13.6 -5.1287 | TAGTCTTTAGTTGTT GACTTTAGGT AAT ACCTAAAGTC TTTTTTAAATATAAA TERM 1137 965514 - 965540 + G 73 -7.3 -3.90906 | overlap 965513 ATTGGTGTGATTTCT GTTGCTGCTCA AAAAG TGAGTGGCGAC TATTTTAATTTAATT rsbU 965139 - 966140 + | sigmaB regulation protein rsbV 966239 - 966565 + | anti-sigma B factor antagonist rsbW 966567 - 967046 + | serine-protein kinase RsbW sigB 967021 - 967791 + | RNA polymerase sigma factor SigB TERM 1138 967910 - 967950 + F 81 -2 -6.09196 | gap 2, opp_overlap 967922 967923 967926, overlap 967926 CTAGTCATCTTTGTG GGGGTGGGACAATGAATTCA CTA TGAATTC-TA-TCCGACTCC TTTTTTTCTTTTGAA TERM 1139 968652 - 968642 - g 95 -4 -6.17184 | opp_overlap 968642 ATGATGAAAAAAAAA CATT TGC AATG TACTATGACTATGTG SH0968 968041 - 970188 + | hypothetical protein SH0969 970298 - 970636 + | hypothetical protein TERM 1140 970658 - 970696 + F 71 -2.5 -5.47159 | opp_overlap 970660, overlap 970660 AGTAACTAAAATTGA AATTCAGGTCTACTTTT ACAAA AATTGTAGATCTGAATA TTTTTGTTTATTAAA TERM 1141 971041 - 971021 - f 70 -6.1 -4.19506 | opp_overlap 971021 971023 AGTTTAATGGCAAAA CCTCAGCCT TCC AAGCTGATG TTGTGGGTTCGATTC TERM 1142 971821 - 971803 - f 70 -8.8 -2.75963 | overlap 971802 AGTCTGATGTGAAAG CCCACGGC TCA ACCGTGGA GGGTCATTGGAAACT TERM 1143 973471 - 973452 - f 84 -9.4 -3.66803 | opp_overlap 973451 973450 CGGGAAGAGCCCAAA CCAATAAG CTTG CTTATTGG GGTTGTAGGACACTC TERM 1144 976293 - 976308 + F 100 -9 -5.60993 | GCCAGGCAAATTATT GAGACC GAAA GGTCTC TTTTTTTATGCACAA TERM 1145 976566 - 976581 + F 100 -9 -5.60993 | GCTAGGCAAATTATT GAGACC GAAA GGTCTC TTTTTTTATGCACAA TERM 1146 976769 - 976810 + F 95 -11.1 -4.44448 | opp_overlap 976770 976772, overlap 976772 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 1147 976809 - 976770 - f 100 -12.4 -4.07562 | opp_overlap 976769 976772, overlap 976772 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 1148 976807 - 976772 - f 100 -15 -3.62348 | opp_overlap 976769 976772, overlap 976770 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1149 976772 - 976807 + F 100 -17.2 -4.33281 | opp_overlap 976772 976770, overlap 976769 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH0970 976780 - 976929 + | hypothetical protein TERM 1150 977145 - 977129 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 1151 977899 - 977913 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 1152 978641 - 978609 - g 90 -8 -5.35222 | opp_overlap 978609 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 1153 978609 - 978641 + G 93 -8 -5.55698 | opp_overlap 978609 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 977013 - 978725 + | IS1272 transposase ilvA 979956 - 978688 - | threonine dehydratase leuD 980538 - 979963 - | isopropylmalate isomerase small subunit leuC 981911 - 980541 - | isopropylmalate isomerase large subunit leuB 982969 - 981929 - | 3-isopropylmalate dehydrogenase leuA 984501 - 982969 - | 2-isopropylmalate synthase TERM 1154 983604 - 983592 - G 78 -7.7 -4.09685 | CTGGATTTTTTAAAA CACCA TCT TGGTG AATGCCAGACTCATG TERM 1155 984350 - 984375 + g 93 -14.1 -2.98823 | opp_overlap 984365 TTAAAGCTACCTGCA CTTGAAGCGGG AAAA CCTGCTTCAAG TATATCTACACCCCA ilvC 985526 - 984522 - | ketol-acid reductoisomerase TERM 1156 985601 - 985579 - R 70 -6.5 -4.14874 | opp_overlap 985579 AGAATATTCTTAAAA TTTAGATAA AGAAA TTATCTAAA TTATGTGATGTTAGT SH0978 985903 - 985661 - | acetolactate synthase 1 regulatory subunit ilvB 987675 - 985900 - | acetolactate synthase large subunit ilvD 989382 - 987694 - | dihydroxy-acid dehydratase TERM 1157 988630 - 988650 + g 89 -7.7 -5.30189 | AGCTTCTCGAGTTAC GATATCAAG TGG TTTGATATC TTTTTTGATATTATC TERM 1158 989342 - 989358 + g 80 -2.9 -5.69473 | AAAAGACTTCGAGCA GGTGCTT GAT GATCACC TTTTTTTATCATGTC TERM 1159 989452 - 989426 - H 100 -13.1 -5.28983 | opp_overlap 989428 989444, overlap 989440 TTTAAAACATAAAAA GACGCCCCAAT TTATG ATTGGGACGTC TATAAGTCCCATTCA TERM 1160 989428 - 989450 + H 71 -8.4 -2.9176 | opp_overlap 989426 989440, overlap 989444 TAAAACATAAAAAGA CGCCCCAATT TAT GATTGGGACG TCTATAAGTCCCATT SH0981 989879 - 990340 + | hypothetical protein SH0982 990321 - 990986 + | hypothetical protein SH0983 990959 - 991423 + | hypothetical protein TERM 1161 991710 - 991729 + G 73 -8.6 -3.28791 | opp_overlap 991710 ATCGGTATTAATGCA GCGAAAGC ACTA GCTTTTGC TTATGACAAACCACT SH0984 991416 - 992444 + | O-sialoglycoprotein endopeptidase TERM 1162 992808 - 992775 - T 100 -11.3 -5.61596 | opp_overlap 992775 ATTTGTATAAAAAAA TTAGCTAGAAAGT TAATTAAT ACTTTCTAGCTAA TGGTAAAATAATGAG vga 994770 - 992827 - | hypothetical protein TERM 1163 994843 - 994868 + H 80 -6.3 -4.87389 | overlap 994846 CTATATTTTACCGTA TTACTTAGTTT CTTG AAACTAAGTTA TTTATTTTTAAAATA TERM 1164 994846 - 994865 + H 82 -8 -4.52502 | overlap 994843 TATTTTACCGTATTA CTTAGTTT CTTG AAACTAAG TTATTTATTTTTAAA TERM 1165 995605 - 995625 + G 70 -6.9 -3.86524 | opp_overlap 995608, overlap 995608 ATTGACTTGGGCATA GAATTGCAA TCA TTGCTATTC TTTATGAAAAACTAT SH0986 995011 - 995649 + | redox-sensing transcriptional repressor Rex TERM 1166 995670 - 995692 + F 95 -9.2 -5.01042 | ATATTTATATTCTTG CATCCTTCTT TAT AAGAGGGGTG TTTTTAATTTGCGTT SH0987 995845 - 996942 + | hypothetical protein SH0988 996962 - 997186 + | hypothetical protein SH0989 997308 - 998552 + | hypothetical protein TERM 1167 998741 - 998721 - g 71 -7.5 -3.53012 | CTCCCGCTTTTTAAA TGGTGGCTC AGT AAGCCCCCA AACTAAAGAAAAATT scrR 998653 - 999612 + | sucrose operon repressor scrB 999697 - 1001181 + | sucrose-6-phosphate hydrolase SH0992 1001185 - 1002150 + | hypothetical protein TERM 1168 1002159 - 1002192 + T 100 -11.9 -5.28778 | opp_overlap 1002158 1002157 1002159 TAAATGATAAAAAGT GCCAGTAAATGATTT TATT AGTTCATTTACTGGC TTTTTTATACGTGAT TERM 1169 1002192 - 1002159 - T 78 -9.8 -2.75822 | opp_overlap 1002159, overlap 1002158 1002157 TAAATGATAAAAAGT GCCAGTAAATGA TTTTATTAGT TCATTTACTGGC TTTTTTATACGTGAT agrA 1002984 - 1002268 - | accessory gene regulator A agrC 1004298 - 1003003 - | AgrC agrD 1004455 - 1004318 - | AgrD protein agrB 1005024 - 1004458 - | accessory gene regulator B (AgrB) TERM 1170 1005158 - 1005132 - R 74 -8.3 -3.62011 | opp_overlap 1005131, overlap 1005156 ATATTGAAATTACAA GTAATATTTTA ACATA TAAAATATTAC AGTTATGTATAAAAA TERM 1171 1005512 - 1005478 - R 84 -9.6 -3.69216 | overlap 1005476 CGTGTAGTTAAAAGA GTTAATTAATAAGCCA TCC CAACTTATTAATTAAC AAAGTAAAGTTACTG TERM 1172 1005678 - 1005704 + r 100 -6.6 -5.60993 | opp_overlap 1005678 TCCCTTAATATGAAA GTCGCGAGTT CCTCCCA AGCTCGTGAC TTTTTTTGTAAAAAA TERM 1173 1005745 - 1005722 - R 100 -9.7 -5.75342 | opp_overlap 1005721 1005722 TTTTTGTAAAAAAAA CTGTATCCA TAAAAT TGGATACAG ATTAGTAACTATTTA TERM 1174 1005722 - 1005745 + r 75 -9.7 -2.53701 | opp_overlap 1005722, overlap 1005721 TTTTTGTAAAAAAAA CTGTATCCA TAAAAT TGGATACAG ATTAGTAACTATTTA SH0997 1006539 - 1005754 - | hypothetical protein TERM 1175 1006679 - 1006651 - R 72 -3.3 -5.30448 | gap 1, overlap 1006652 AAATAAATATAAAAA GGACTCAATTTC AACATA GAAAT-GAATCC TATAGAAACTGAGTC SH0998 1007355 - 1006732 - | hypothetical protein SH0999 1007538 - 1009226 + | hypothetical protein TERM 1176 1009236 - 1009279 + T 80 -9.1 -3.6914 | opp_overlap 1009236 1009268, overlap 1009232 AACTAAAATAGAAAA CGCATCTATTATTGTCATT TGAAAT GATGAGATTAATAGATGCG TTCATTTATTAAAAT TERM 1177 1009279 - 1009236 - T 95 -8.4 -4.93333 | opp_overlap 1009236 1009232, overlap 1009268 AACTAAAATAGAAAA CGCATCTATTATTGTCAT TTGAAATG ATGAGATTAATAGATGCG TTCATTTATTAAAAT SH1000 1010028 - 1009288 - | hypothetical protein TERM 1178 1009817 - 1009831 + g 72 -2.8 -5.32882 | TCTTTATAACCTCGC TCCAGT GCT GTTGGA TTTTTTATAATACTA groES 1010205 - 1010492 + | co-chaperonin GroES TERM 1179 1011003 - 1010976 - g 83 -4.9 -5.46706 | opp_overlap 1010999, overlap 1010977 1010992 AGTTGAAAATAAAAA TGAAATCGCAC AAGTAG GTGCAATTTCT GCAGCAGATGAAGAA TERM 1180 1011002 - 1010977 - g 75 -8.4 -3.86397 | opp_overlap 1010999, overlap 1010976 1010992 GTTGAAAATAAAAAT GAAATCGCAC AAGTAG GTGCAATTTC TGCAGCAGATGAAGA TERM 1181 1011377 - 1011358 - g 74 -9.4 -3.02511 | opp_overlap 1011352, overlap 1011342 CGTATGCGTGGAACA TTTACTGC AGTT GCAGTAAA AGCACCTGGATTCGG groEL 1010554 - 1012173 + | chaperonin GroEL TERM 1182 1012260 - 1012298 + T 100 -12.6 -5.38951 | AAATAATCCTTTTGA GACGTTTTCCATGAGTTT ACT AAACTTTTGGGAAGCGTC TTTTTTGTATGAGTT int 1013417 - 1012242 - | hypothetical protein SH1004 1013653 - 1013426 - | hypothetical protein TERM 1183 1013605 - 1013624 + g 86 -5.7 -5.63374 | CAGCATCTAGAGGGA CACGACC ATAATA GGTTGTG TTTTTTTCATCTTCA tnp 1013943 - 1015115 + | transposase for IS256 TERM 1184 1015252 - 1015270 + F 100 -7.4 -5.75822 | opp_overlap 1015252 CCTTTAATAAATTGA CTGTATCC TTT GGGTGCAG TTTTTTTAATTTATA TERM 1185 1015424 - 1015440 + F 73 -8.7 -3.08133 | GAAACTTTCCTCATA TGTCGCA ACT TGCGACG TTAGGTAAATGAATA SH1006 1015868 - 1016569 + | hypothetical protein SH1007 1016562 - 1017002 + | hypothetical protein TERM 1186 1017124 - 1017138 + T 100 -7.8 -5.63517 | opp_overlap 1017124 1017126 AATCAGTGCACAAAA GGCCCT TTA AGGGTC TTTTTTATTTAGAAA TERM 1187 1017138 - 1017124 - T 70 -5.6 -4.41206 | opp_overlap 1017124, overlap 1017126 AATCAGTGCACAAAA GGCCCT TTA AGGGTC TTTTTTATTTAGAAA TERM 1188 1017229 - 1017242 + T 71 -3.9 -5.17744 | TTTTTATTATTTCCT TTGTT TTCA AACAA TTTTTCTTAATGTAT tnp 1018572 - 1017400 - | transposase for IS256 TERM 1189 1018746 - 1018764 + r 100 -9.6 -5.58074 | opp_overlap 1018746 ATATCTCATTTCAAA CGTCACTT TTA AAGTGGCG TTTTTTTGATAATTA TERM 1190 1018815 - 1018799 - R 81 -8 -4.40692 | overlap 1018796 GGTAAAAAATAATAA GGGTAG GCGGA CTACCC CGAAATTCATTAAAT SH1009 1019706 - 1018825 - | hypothetical protein TERM 1191 1019029 - 1019047 + g 77 -5.4 -4.99645 | AAAGTATTTTAGCTC TTTAAATG GCA CGTTTAAA TTTTCTTTGTAAAGT TERM 1192 1019172 - 1019194 + g 75 -4.8 -4.87665 | overlap 1019174 TCAAATCTTTTTTCA TACCTGTGAA TTC TTCTCGGGTG TTTTTATCGATACCA TERM 1193 1019437 - 1019449 + g 70 -2 -5.30199 | AATAAAATTTAAAGT TTCT CTCAA AGAA TTTTTATTGATTTTT SH1010 1019734 - 1019937 + | hypothetical protein TERM 1194 1019938 - 1019955 + T 100 -7.7 -5.60993 | AATGGTAAATTTTAA CGTCTAC TTAT GTAGGCG TTTTTTTATACCAAA SH1011 1020633 - 1020016 - | hypothetical protein SH1012 1020989 - 1020825 - | hypothetical protein SH1013 1021394 - 1021056 - | hypothetical protein TERM 1195 1021216 - 1021231 + g 71 -3.2 -5.0917 | GCGTTATATTGTTGA GCGGTA TACG TACGGC TTTGTTTTTTACTAG SH1014 1021489 - 1021391 - | hypothetical protein SH1015 1021830 - 1021669 - | hypothetical protein SH1016 1022290 - 1021889 - | hypothetical protein TERM 1196 1023092 - 1023056 - H 84 -11.1 -2.62332 | opp_overlap 1023056, overlap 1023048 1023075 1023078 AAATTAATTAATTTA GACGCTTTTCGAA AAATAATCACA TTCGAAAAGCGTC TTTTTTAATGGGAAA TERM 1197 1023056 - 1023092 + H 100 -11.1 -5.14563 | opp_overlap 1023048 1023056 1023075 1023078 AAATTAATTAATTTA GACGCTTTTCGAA AAATAATCACA TTCGAAAAGCGTC TTTTTTAATGGGAAA SH1017 1023189 - 1023587 + | hypothetical protein TERM 1198 1023762 - 1023793 + T 76 -7.3 -4.41047 | opp_overlap 1023764, overlap 1023764 TTATCTAAAAATAAA AACGAGTCTAGGA ATTATA TCCAAGACTCGTC TTTTAATTAAGAGCT TERM 1199 1023764 - 1023791 + T 89 -9.9 -3.8125 | opp_overlap 1023764, overlap 1023762 ATCTAAAAATAAAAA CGAGTCTAGGA ATTATA TCCAAGACTCG TCTTTTAATTAAGAG TERM 1200 1023791 - 1023764 - T 100 -9.9 -5.63236 | opp_overlap 1023764 1023762 ATCTAAAAATAAAAA CGAGTCTAGGA ATTATA TCCAAGACTCG TCTTTTAATTAAGAG SH1018 1025386 - 1024100 - | hypothetical protein TERM 1201 1024302 - 1024319 + g 79 -4.1 -5.24799 | opp_overlap 1024302 1024296, overlap 1024296 TAACCAGAATTAAAA TCATAGG CTTG CCAATGA TTTTTATATTTATCG TERM 1202 1025449 - 1025425 - H 71 -8.1 -3.26444 | opp_overlap 1025415 1025424 1025423 1025421, overlap 1025423 GTGTTTAATAATATA TTATCTTTAAA TGC CTTAAAGATAA AGTGTTCCTATAATG TERM 1203 1025492 - 1025519 + H 88 -10.8 -3.0752 | opp_overlap 1025498 1025499, overlap 1025499 TGCTAATTAGGTTTA TAAAAAGCGAAC ATTT GTTCGTTTTTTA TGTTAGAATAATGTC TERM 1204 1025499 - 1025512 + H 91 -6.7 -5.47159 | opp_overlap 1025498 1025499, overlap 1025492 TAGGTTTATAAAAAG CGAAC ATTT GTTCG TTTTTTATGTTAGAA SH1019 1025580 - 1025675 + | hypothetical protein TERM 1205 1025693 - 1025720 + F 100 -14.3 -3.58766 | opp_overlap 1025693 GACCATACACAAAAA CCCCTAACTTG CCGTCA CAAGTTAGGGG TTGTGTAATGTAATT TERM 1206 1025720 - 1025693 - f 100 -15 -5.05601 | opp_overlap 1025693 GACCATACACAAAAA CCCCTAACTTGC CGTC ACAAGTTAGGGG TTGTGTAATGTAATT SH1020 1025848 - 1026027 + | hypothetical protein TERM 1207 1026037 - 1026068 + F 100 -9 -5.43553 | gap 1 AAATAACATTTTAGA CTCTATAT-TAGCGT TTG ACGTTAGATATAGAG TTTTATTTTTTAAAT SH1021 1026216 - 1026596 + | hypothetical protein TERM 1208 1026895 - 1026885 - g 79 -5.4 -5.16472 | opp_overlap 1026885 AAAAACTTGAAAAAA TGGT TTC ACCA TTTTATACCGATTGG SH1022 1026593 - 1027492 + | hypothetical protein SH1023 1027489 - 1028172 + | hypothetical protein SH1024 1028169 - 1029041 + | hypothetical protein SH1025 1029042 - 1029770 + | hypothetical protein TERM 1209 1029834 - 1029800 - T 100 -16 -5.1287 | opp_overlap 1029800 TTGATATCCAAAAAA GAGGGTAGTAAAACAA ATT TTGTTTTATTACCCTC TTACTATATATACTT TERM 1210 1029800 - 1029834 + T 100 -18.2 -3.36313 | opp_overlap 1029800 TTGATATCCAAAAAA GAGGGTAGTAAAACAA ATT TTGTTTTATTACCCTC TTACTATATATACTT SH1026 1030410 - 1029850 - | hypothetical protein SH1027 1030623 - 1031108 + | hypothetical protein TERM 1211 1031335 - 1031325 - g 73 -4 -5.04325 | GGGAAATCAGAAAAA GATA TTA TATC GGATTTAAGAGAACC SH1028 1031193 - 1031750 + | hypothetical protein TERM 1212 1032091 - 1032075 - g 73 -3.7 -5.05577 | overlap 1032068 1032077 AAAGTAAATCAAAAA TTGAAGT TAC ACTTCCA AATAAAAACATTAAT SH1029 1031747 - 1032589 + | hypothetical protein TERM 1213 1032619 - 1032592 - T 75 -5.7 -4.70353 | opp_overlap 1032591 1032592 CACAATAAAGTAAAA TGATTGCCT ACACAATAAG AGGCAATCA CTTATATAAGTCGAC SH1030 1033701 - 1032661 - | hypothetical protein SH1031 1034038 - 1034211 + | hypothetical protein TERM 1214 1034226 - 1034253 + F 100 -10.7 -5.65927 | opp_overlap 1034226 ATAATAGTAATTTAA CCAGTGACTTC CGTTTT GAAGTTACTGG TTTTTTATTTCAATA TERM 1215 1034253 - 1034226 - f 74 -8.5 -3.24381 | opp_overlap 1034226 ATAATAGTAATTTAA CCAGTGACTTC CGTTTT GAAGTTACTGG TTTTTTATTTCAATA TERM 1216 1034771 - 1034745 - g 71 -6.7 -4.09292 | gap 1 AATTCAAGAATTAAA TCACGACTATCC ACTT GGA-AGTCATGA ACGTCAAGAGCATTC SH1032 1034353 - 1035387 + | hypothetical protein TERM 1217 1035425 - 1035400 - T 71 -7.5 -3.57572 | opp_overlap 1035400, overlap 1035396 TAAGTAAAATACTAA GCCACGGCAGT GTAA AATGTCGTGGC TTTTTGCAAATTTTT TERM 1218 1035400 - 1035425 + T 100 -9.7 -4.67168 | opp_overlap 1035400 1035396 TAAGTAAAATACTAA GCCACGGCAGT GTAA AATGTCGTGGC TTTTTGCAAATTTTT aldH 1036821 - 1035439 - | aldehyde dehydrogenase TERM 1219 1036891 - 1036877 - R 71 -4.3 -4.82998 | opp_overlap 1036877 TTAAATTAAAATAAA TGATG TAATT CATCA TATCTATACCCTAAA TERM 1220 1036951 - 1036924 - R 100 -14.4 -5.4505 | opp_overlap 1036922 TTTTTCAATAAAAAA CAGTTGAATGAA AAGA TTCATTCAACTG CGTATATAAAGGCGA SH1034 1037917 - 1036988 - | putative manganese-dependent inorganic pyrophosphatase TERM 1221 1037863 - 1037844 - G 75 -7.2 -4.11484 | opp_overlap 1037844 1037857 1037862, overlap 1037859 GTTAATTGTTCAAAA TCAGCCAT GATG ATAGCTGA TGCTATTGCATCTGT SH1035 1038528 - 1037968 - | hypothetical protein TERM 1222 1039579 - 1039593 + G 75 -7.2 -4.1552 | GGTGAGAATTTCAGT GTGATT GGT AATCAC TTTATTGGAGAAATG SH1036 1038697 - 1039779 + | hypothetical protein TERM 1223 1039812 - 1039860 + T 100 -17.1 -3.66999 | opp_overlap 1039813 1039817, overlap 1039813 1039817 GAACACAACCCAACA ATAAATAGCCAGTAAATACGTTT TGA AGACGCATTTACTGGCTATTTAA TTTCGATACATCAGT TERM 1224 1039813 - 1039859 + T 100 -20.6 -2.79878 | opp_overlap 1039813 1039817, overlap 1039812 1039817 AACACAACCCAACAA TAAATAGCCAGTAAATACGTTT TGA AGACGCATTTACTGGCTATTTA ATTTCGATACATCAG TERM 1225 1039859 - 1039813 - T 100 -20.6 -3.7744 | opp_overlap 1039813 1039812 1039817, overlap 1039817 AACACAACCCAACAA TAAATAGCCAGTAAATACGTTT TGA AGACGCATTTACTGGCTATTTA ATTTCGATACATCAG TERM 1226 1039817 - 1039855 + T 100 -17 -4.08485 | opp_overlap 1039813 1039817, overlap 1039813 1039812 CAACCCAACAATAAA TAGCCAGTAAATACGTTT TGA AGACGCATTTACTGGCTA TTTAATTTCGATACA TERM 1227 1039855 - 1039817 - T 100 -17 -4.4846 | opp_overlap 1039817 1039813 1039812, overlap 1039813 CAACCCAACAATAAA TAGCCAGTAAATACGTTT TGA AGACGCATTTACTGGCTA TTTAATTTCGATACA SH1037 1040738 - 1039938 - | hypothetical protein SH1038 1041829 - 1040768 - | hypothetical protein TERM 1228 1041128 - 1041148 + g 74 -9.1 -3.07962 | opp_overlap 1041132, overlap 1041132 GCGGTATGAGTCAGT GAAATTGCG TAC TGCAATTTC TGTTACCATATACCA SH1039 1042015 - 1043484 + | nicotinate phosphoribosyltransferase nadE 1043477 - 1044298 + | NAD synthetase SH1041 1044383 - 1044991 + | hypothetical protein SH1042 1044972 - 1045142 + | hypothetical protein TERM 1229 1045182 - 1045218 + F 91 -7.5 -5.19328 | opp_overlap 1045182 AATTAATTTTATTAA GAGTGAAAAGAAGCT AAAGTAC AACTTCTTTTTACTC TTTTTATTATCGGAT TERM 1230 1045218 - 1045182 - f 71 -8.2 -3.19425 | opp_overlap 1045182 AATTAATTTTATTAA GAGTGAAAAGAAGCTA AAGTA CAACTTCTTTTTACTC TTTTTATTATCGGAT purB 1045419 - 1046714 + | adenylosuccinate lyase SH1044 1046809 - 1047111 + | hypothetical protein TERM 1231 1047144 - 1047189 + F 72 -6.9 -4.08271 | opp_overlap 1047144 1047145, overlap 1047139 1047145 ATTTATAAATTGAAA TGCTCCCTTCAAAATTGACAA TAAT TTGGATATTTTGATGGGAGCG TTCTGTTTTATATTG TERM 1232 1047145 - 1047188 + F 70 -8.2 -3.03336 | opp_overlap 1047145 1047144, overlap 1047144 1047139 TTTATAAATTGAAAT GCTCCCTTCAAAATTGACAA TAAT TTGGATATTTTGATGGGAGC GTTCTGTTTTATATT pcrB 1047388 - 1048083 + | geranylgeranylglyceryl phosphate synthase-like protein pcrA 1048080 - 1050275 + | ATP-depentend DNA helicase lig 1050279 - 1052282 + | DNA ligase camS 1052295 - 1053500 + | sex pheromone staph-cAM373 precursor TERM 1233 1053548 - 1053501 - T 95 -11.7 -3.5861 | gap 2, opp_overlap 1053501 1053508, overlap 1053508 ATTTATAATAATTAA CATAAAACTACGGATAACGCCTA CAAG TTGG-GTTATCCGTAGTTTT-TG TTTAATATTATTGGC TERM 1234 1053501 - 1053548 + T 100 -11.7 -4.01135 | gap 2, opp_overlap 1053501 1053508, overlap 1053508 ATTTATAATAATTAA CATAAAACTACGGATAACGCCTA CAAG TTGG-GTTATCCGTAGTTTT-TG TTTAATATTATTGGC TERM 1235 1053508 - 1053542 + T 100 -10.9 -5.37171 | gap 1, opp_overlap 1053501 1053508, overlap 1053501 ATAATTAACATAAAA CTACGGATAACGCCTA CAAG TTGG-GTTATCCGTAG TTTTTGTTTAATATT TERM 1236 1053542 - 1053508 - T 100 -10.9 -4.74767 | gap 1, opp_overlap 1053508 1053501, overlap 1053501 ATAATTAACATAAAA CTACGGATAACGCCTA CAAG TTGG-GTTATCCGTAG TTTTTGTTTAATATT TERM 1237 1053598 - 1053628 + T 100 -16.4 -5.95946 | opp_overlap 1053596 1053606 1053607 ATGAGTCCTAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 1054918 - 1053602 - | transposase for ISSha1 TERM 1238 1054565 - 1054581 + g 73 -4.5 -4.88918 | TTCTTGTGCTTTATT TAAAACT GCA AGTTTTG TTTTATTTGAAATAA TERM 1239 1055044 - 1054998 - R 90 -8.4 -4.65895 | gap 1, opp_overlap 1055006, overlap 1055006 TTTTCTATTCAAAAA CATGA-AAATTGGACTGATGA ATTTTG TCATCAGTCCAATTTATTATA GAACCATATTATTAT TERM 1240 1055035 - 1055006 - R 100 -13.8 -4.60746 | opp_overlap 1055006, overlap 1054998 TCAAAAACATGAAAA TTGGACTGATGA ATTTTG TCATCAGTCCAA TTTATTATAGAACCA TERM 1241 1055006 - 1055035 + r 100 -13.8 -4.30719 | opp_overlap 1054998 1055006 TCAAAAACATGAAAA TTGGACTGATGA ATTTTG TCATCAGTCCAA TTTATTATAGAACCA putP 1056393 - 1055056 - | high affinity proline permease TERM 1242 1056779 - 1056767 - H 74 -2.7 -5.61881 | overlap 1056761 TTTTAAAAAGAAAAA TACTT TCA AAGCA CAATAGTAAGCGTTT gatC 1057060 - 1057362 + | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA 1057364 - 1058821 + | glutamyl-tRNA (Gln) amidotransferase subunit A gatB 1058834 - 1060261 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1243 1060300 - 1060332 + T 100 -12.1 -4.71222 | opp_overlap 1060300 TAAAGCATCATTTAA GGTTTGTTTCCTATC ATG GTTAGGGAACAAGCC TTTTAATTTTGGTGT SH1054 1060454 - 1060362 - | hypothetical protein SH1055 1060510 - 1061502 + | putative lipid kinase SH1056 1061605 - 1062969 + | hypothetical protein SH1057 1063096 - 1063644 + | hypothetical protein SH1058 1063750 - 1064826 + | hypothetical protein SH1059 1065543 - 1064884 - | hypothetical protein TERM 1244 1065340 - 1065329 - G 71 -3 -5.05228 | opp_overlap 1065329 1065336 ACTAAAGTATAAAAA GATT CCAC AATC TCATTGTTAACTACT TERM 1245 1065523 - 1065554 + g 82 -8.8 -3.90766 | opp_overlap 1065524 1065526, overlap 1065519 1065524 CATTCTTAAAATAAA ATAGAGTGGAAATG AATT CATTTCCACTCCAG TTATATTTATGAGTA TERM 1246 1065524 - 1065553 + g 86 -12.3 -2.93737 | opp_overlap 1065524 1065526, overlap 1065523 1065519 ATTCTTAAAATAAAA TAGAGTGGAAATG AATT CATTTCCACTCCA GTTATATTTATGAGT TERM 1247 1065553 - 1065524 - G 100 -14.5 -5.08255 | opp_overlap 1065523 1065519 1065524, overlap 1065526 ATTCTTAAAATAAAA TAGAGTGGAAATG AATT CATTTCCACTCCA GTTATATTTATGAGT TERM 1248 1065551 - 1065526 - G 100 -14.9 -4.16397 | opp_overlap 1065524 1065523 1065519, overlap 1065524 TCTTAAAATAAAATA GAGTGGAAATG AATT CATTTCCACTC CAGTTATATTTATGA SH1060 1066179 - 1065679 - | hypothetical protein SH1061 1066375 - 1067685 + | hypothetical protein SH1062 1067688 - 1068407 + | hypothetical protein TERM 1249 1068466 - 1068431 - T 85 -7 -4.9445 | opp_overlap 1068431 ATAAGCAATTAAAAA TGACGTACCGGA TCTATAGAATTT TCCAGTACGTCA TTTTTTATTTGTCAT TERM 1250 1068431 - 1068466 + T 83 -4.8 -5.73978 | opp_overlap 1068431 ATAAGCAATTAAAAA TGACGTACCGGA TCTATAGAATTT TCCAGTACGTCA TTTTTTATTTGTCAT SH1063 1069460 - 1068471 - | hypothetical protein TERM 1251 1069762 - 1069778 + G 70 -8 -3.17051 | opp_overlap 1069761 1069759 1069762, overlap 1069761 TTGTTTGAAGAACAT GGTGCT ATTTC AGCACC TATTCATGATGAGAA map 1069612 - 1070364 + | methionine aminopeptidase TERM 1252 1070423 - 1070456 + T 79 -4.8 -5.42514 | gap 2, opp_overlap 1070423 1070418 TATATATAATGAAAA CCAGTAAAATGAGATG ACAA CG-CTCATT-TACTGG TTTTTTAGTTTATAC SH1065 1071346 - 1070489 - | hypothetical protein SH1066 1071690 - 1071418 - | hypothetical protein SH1067 1072430 - 1071603 - | hypothetical protein TERM 1253 1071925 - 1071909 - GH 86 -9.5 -3.81428 | ACTAATGAATTTAAA GTATGGT CCG ACCATAC GAGAAACAAAGCCGC SH1068 1072643 - 1073029 + | hypothetical protein SH1069 1073054 - 1073755 + | hypothetical protein TERM 1254 1074191 - 1074179 - g 72 -4.9 -4.75309 | TCAAAGTTAAGAAAA TCATT GAG AATGA ACGACAGAGATTAGC TERM 1255 1074407 - 1074397 - g 71 -5.4 -4.48449 | GGACTAAAAGATAAA TCAC TAG GTGA AGGTATCAAAGATTT vraS 1073752 - 1074798 + | two-component sensor histidine kinase vraR 1074788 - 1075417 + | two-component response regulator TERM 1256 1075435 - 1075465 + F 100 -14.2 -5.20783 | opp_overlap 1075435 AGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1257 1075465 - 1075435 - f 100 -16.4 -4.30987 | opp_overlap 1075435 AGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1258 1075608 - 1075594 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 1259 1076839 - 1076871 + G 81 -10.7 -2.63089 | opp_overlap 1076840, overlap 1076838 1076836 GTCAACAACAAAAAA AGAGATTAAACAACC TAA GGTTGCTTAATCTCA ATATTTGGACTCATC TERM 1260 1076870 - 1076840 - g 100 -16.4 -5.95946 | opp_overlap 1076839 1076838 1076836 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTTGGACTCAT tnp 1075550 - 1076866 + | transposase for ISSha1 TERM 1261 1076946 - 1076918 - T 100 -10.4 -5.8187 | opp_overlap 1076918 GAGCCAATAAAAAAA GGTTGAGGCA ATAAACCGA TGCCTCAACC TTTTTTTAATTTAAT TERM 1262 1076918 - 1076946 + T 100 -10.4 -5.73563 | opp_overlap 1076918 GAGCCAATAAAAAAA GGTTGAGGCA ATAAACCGA TGCCTCAACC TTTTTTTAATTTAAT SH1073 1078187 - 1076976 - | hypothetical protein TERM 1263 1078281 - 1078238 - R 76 -7.1 -4.34993 | gap 3, opp_overlap 1078238, overlap 1078235 TAAATAGTAAAATAA GCGGGAC-A-GAAACCTGTTAT ATA ATAA-AGATTTCATTGTCCCGC CTTACTATGAGTGAA SH1074 1078668 - 1078384 - | hypothetical protein SH1075 1079138 - 1078674 - | hypothetical protein TERM 1264 1079386 - 1079375 - g 73 -4.4 -4.85433 | AGATAAATTTAAAAA TGCT AATC AGCA AGATATAGAAGAAAT SH1076 1079280 - 1079489 + | hypothetical protein TERM 1265 1080453 - 1080470 + G 70 -7 -3.77196 | TGATGAGGGTTCTAA GCGACT AGGAGA AGTCGC TTTAGTACCTGATGA ampS 1079503 - 1080750 + | aminopeptidase ampS SH1078 1080783 - 1081316 + | hypothetical protein TERM 1266 1081402 - 1081443 + F 95 -11.1 -4.44448 | opp_overlap 1081403 1081405, overlap 1081405 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 1267 1081442 - 1081403 - f 100 -12.4 -4.07562 | opp_overlap 1081402 1081405, overlap 1081405 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 1268 1081405 - 1081440 + F 100 -17.2 -4.33281 | opp_overlap 1081403 1081405, overlap 1081402 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1269 1081440 - 1081405 - f 100 -15 -3.62348 | opp_overlap 1081405 1081402, overlap 1081403 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH1079 1081413 - 1081562 + | hypothetical protein TERM 1270 1081778 - 1081762 - gf 71 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 1271 1082532 - 1082546 + GF 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG tnp 1081646 - 1082980 + | IS1272 transposase TERM 1272 1083241 - 1083273 + GT 95 -8 -5.55698 | opp_overlap 1083241 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 1273 1083273 - 1083241 - gT 93 -8 -5.35222 | opp_overlap 1083241 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 1082944 - 1083315 + | IS1272 transposase SH1082 1084489 - 1083344 - | hypothetical protein TERM 1274 1083511 - 1083525 + g 76 -4.2 -5.19879 | opp_overlap 1083511 ATTTATTAAATACAT CAGTCA ATT TGTCTG TTTTTATATTTGAGA SH1083 1084637 - 1084798 + | hypothetical protein SH1084 1084888 - 1085406 + | hypothetical protein TERM 1275 1085482 - 1085519 + F 100 -12.9 -5.47159 | opp_overlap 1085481 1085485 TTCGCAATATTTAAT GAACTGAGAAGAGACTT TAAT ATGTCTTTTCTCGGTTC TTTTTTGTATTCAAA SH1085 1085503 - 1085541 + | hypothetical protein TERM 1276 1085950 - 1085935 - g 71 -3.2 -5.10933 | CTATTGAAAATAAAA GCAGTT ATGT ATCTGC AGACAATATGCCTGA sgtB 1085697 - 1086509 + | glycosyltransferase TERM 1277 1086553 - 1086595 + F 78 -6 -4.99035 | gap 2, opp_overlap 1086553 1086567 CGTAATTATAATTTA GTCTTCATAAAGTATTCATT ATATA AATGAA--CTTTATGAGGAC TTTTTATATAGGTAA recX 1086716 - 1087519 + | recombination regulator RecX SH1088 1087512 - 1087826 + | hypothetical protein SH1089 1087842 - 1089353 + | hypothetical protein SH1090 1089362 - 1090123 + | hypothetical protein tnp 1090201 - 1091373 + | transposase for IS256 TERM 1278 1091536 - 1091483 - T 100 -9.9 -5.13354 | opp_overlap 1091488, overlap 1091488 GCGACAAAAAATAAA TAAAAGAGTGAATCAGAATCATA GTGTAGTT TATGGTTCTGGTTCACTCTTTTT AAAAATTATTTAGAA TERM 1279 1091531 - 1091488 - T 100 -9.8 -5.3472 | opp_overlap 1091488, overlap 1091483 AAAAAATAAATAAAA GAGTGAATCAGAATCATA GTGTAGTT TATGGTTCTGGTTCACTC TTTTTAAAAATTATT TERM 1280 1091488 - 1091531 + T 100 -14.9 -4.64144 | opp_overlap 1091488 1091483 AAAAAATAAATAAAA GAGTGAATCAGAATCATAG TGTAGT TTATGGTTCTGGTTCACTC TTTTTAAAAATTATT SH1092 1092519 - 1091542 - | hypothetical protein TERM 1281 1093285 - 1093303 + G 76 -9.6 -2.84732 | opp_overlap 1093281, overlap 1093276 TTCAAGACAATTGCA GTGCTTTC AAA GAAGGCAC TGTGCTAGATTTACC SH1093 1092663 - 1093709 + | hypothetical protein SH1094 1093832 - 1094374 + | hypothetical protein TERM 1282 1094722 - 1094735 + G 74 -5.3 -4.72277 | CAACATCTAAGTGTA GCTAT CGGC ATAGC TTTATTTATATTCTT SH1095 1094539 - 1096275 + | hypothetical protein TERM 1283 1096318 - 1096284 - T 100 -9.4 -5.58454 | gap 1, opp_overlap 1096282 1096286, overlap 1096287 1096300 TTTATAGTAAAAAAA TGA-GCCTGTGGCAT AATTCA ATGCCTCAGGCTTCA AATATATATTGGCAG TERM 1284 1096314 - 1096287 - T 93 -11.3 -3.5415 | opp_overlap 1096286 1096282, overlap 1096284 1096300 ATAGTAAAAAAATGA GCCTGTGGCAT AATTCA ATGCCTCAGGC TTCAAATATATATTG SH1096 1097558 - 1096464 - | hypothetical protein TERM 1285 1097660 - 1097702 + r 70 -8.7 -2.68802 | gap 1, opp_overlap 1097660, overlap 1097659 1097699 TGATTAATAAAAAAA CTACAATAAAGGCAACGTTA TAAT TCACGCT-CCTTTATTGTAG GTTATAAATTTACTA TERM 1286 1097702 - 1097660 - R 100 -10.9 -5.84381 | gap 1, opp_overlap 1097660 1097659 1097699 TGATTAATAAAAAAA CTACAATAAAGGCAACGTTA TAAT TCACGCT-CCTTTATTGTAG GTTATAAATTTACTA gsaB 1099004 - 1097715 - | glutamate-1-semialdehyde aminotransferase TERM 1287 1097893 - 1097905 + g 72 -2.7 -5.24989 | GAATTCTCAACTTGC TCATA ATG TGTGA TTTTTTCATCTGTGA TERM 1288 1098660 - 1098670 + g 79 -5.4 -5.0538 | TTCAGTTCCAGAGTT TACG AAT CGTA TTTTTTCAAGTGACG TERM 1289 1098984 - 1098998 + g 73 -7.2 -4.04415 | CAATTGTTGTAGACG TTCACT CTC AGTGAA TTTCATCTTATTTCA SH1098 1099086 - 1099541 + | hypothetical protein SH1099 1099547 - 1100344 + | hypothetical protein tnp 1101487 - 1100315 - | transposase for IS256 SH1101 1101764 - 1101829 + | hypothetical protein SH1102 1101923 - 1102375 + | hypothetical protein TERM 1290 1102485 - 1102473 - f 89 -7.7 -5.02074 | CTAGGTTTGAAAAAA GCTTG ATT CAAGC GCATTTTCAAATCAG TERM 1291 1102525 - 1102556 + F 78 -4.4 -5.5353 | opp_overlap 1102520 1102525 GACAAAATGATAAAA GAGGATGAGACA TTTTATTT TGTCCCAGCCTC TTTTTTATTAATCTA TERM 1292 1102556 - 1102525 - f 79 -6.6 -4.70046 | opp_overlap 1102525, overlap 1102520 GACAAAATGATAAAA GAGGATGAGACA TTTTATTT TGTCCCAGCCTC TTTTTTATTAATCTA TERM 1293 1103758 - 1103740 - f 70 -8.8 -2.75963 | overlap 1103739 AGTCTGATGTGAAAG CCCACGGC TCA ACCGTGGA GGGTCATTGGAAACT TERM 1294 1105421 - 1105402 - f 84 -9.4 -3.66803 | opp_overlap 1105401 1105400 CGGGAAGAGCCCAAA CCAATAAG CTTG CTTATTGG GGTTGTAGGACACTC TERM 1295 1108635 - 1108615 - f 79 -9.7 -3.31263 | overlap 1108617 AGTTCAGTGGTAGAA CACCACCTT GCC AAGGTGGGG GTCGCGGGTTCGAAT TERM 1296 1108633 - 1108617 - f 90 -10.9 -3.22475 | overlap 1108615 TTCAGTGGTAGAACA CCACCTT GCC AAGGTGG GGGTCGCGGGTTCGA TERM 1297 1110714 - 1110698 - f 71 -8 -3.23447 | overlap 1110696 TCAACTTTTAGAATA CGTTCC TTCCC GGAACG AGATATAGGTGCAAA TERM 1298 1110755 - 1110768 + F 100 -6.7 -5.72622 | CGCTCCATGTTTTTG CTTCC AAAT GGAAG TTTTTTATTTATCAA TERM 1299 1110886 - 1110915 + F 100 -12.3 -6.28401 | opp_overlap 1110894 GGTATAATTCTTAAT GTGGAAATGTTGT TTTA GCAACGTTTCCAC TTTTTTTGTTTTTTA TERM 1300 1111794 - 1111810 + G 70 -4.4 -4.7033 | GCTAACATGGGCATT GTCGCA GCTTG TGTGAC TTTTATATTCGGTTC SH1103 1111275 - 1112198 + | hypothetical protein TERM 1301 1112321 - 1112358 + F 91 -8 -5.16472 | gap 1 CTAGTTAACCTGTCA GGGTGAGACAAAGATTC AAATC GAAT-TTTGTTTCACTC TTTTTTAAAATTTTT TERM 1302 1112933 - 1112923 - g 86 -5.4 -5.64873 | GTGAACAAGAAAAAA TTGC ACA GCAA GAAATAGAAAATGCA SH1104 1112430 - 1113884 + | hypothetical protein SH1105 1113877 - 1114599 + | glutamate ABC transporter ATP-binding protein TERM 1303 1114657 - 1114612 - f 88 -9.2 -4.62392 | opp_overlap 1114615 1114617, overlap 1114615 1114617 TAATAAGTAAACAAA TAACAGCGAGTCTGAGACAT TATTTC ATGTTTCAAACTCGCTATTT TTAAATTGAACTGGA TERM 1304 1114654 - 1114615 - f 95 -10.9 -4.38369 | opp_overlap 1114615 1114617, overlap 1114612 1114617 TAAGTAAACAAATAA CAGCGAGTCTGAGACAT TATTTC ATGTTTCAAACTCGCTA TTTTTAAATTGAACT TERM 1305 1114615 - 1114654 + F 90 -8.7 -4.74504 | opp_overlap 1114615 1114612 1114617, overlap 1114617 TAAGTAAACAAATAA CAGCGAGTCTGAGACAT TATTTC ATGTTTCAAACTCGCTA TTTTTAAATTGAACT TERM 1306 1114652 - 1114617 - f 93 -11.3 -3.76815 | opp_overlap 1114615 1114617, overlap 1114615 1114612 AGTAAACAAATAACA GCGAGTCTGAGACAT TATTTC ATGTTTCAAACTCGC TATTTTTAAATTGAA TERM 1307 1114617 - 1114652 + F 95 -11.3 -3.98859 | opp_overlap 1114617 1114615 1114612, overlap 1114615 AGTAAACAAATAACA GCGAGTCTGAGACAT TATTTC ATGTTTCAAACTCGC TATTTTTAAATTGAA SH1106 1114777 - 1115904 + | hypothetical protein SH1107 1115905 - 1116375 + | hypothetical protein SH1108 1116547 - 1117146 + | hypothetical protein SH1109 1117169 - 1117318 + | hypothetical protein TERM 1308 1117368 - 1117398 + F 100 -9.2 -5.52384 | opp_overlap 1117368 TAGTTATGAACTAAG TAACCTAAGATGTT AAA GATGTCTTAGGTTA TTTTTTTAATGAAGC SH1110 1117529 - 1117924 + | hypothetical protein TERM 1309 1117976 - 1118012 + F 95 -6 -5.77988 | TTTTTTCAAAGATAG TAGCGATTGGGACATT AAATC ATTGTTTCAATCGTTA TTTTTTTATATCTAT TERM 1310 1118017 - 1118035 + F 78 -7.6 -4.34263 | TTCAATCGTTATTTT TTTATATC TAT GATATAAA TTTGTATTATTGAAA TERM 1311 1119345 - 1119315 - g 70 -4.2 -4.72631 | ACCAATTGAAGAAAA CATTAATAATTATT TAA ATCAATCATTAATG TTAGTTACTGCACTA fumC 1118131 - 1119516 + | fumarate hydratase TERM 1312 1119538 - 1119580 + T 88 -9.5 -4.2704 | gap 1, opp_overlap 1119543, overlap 1119543 ACCACATATAACTAA TAA-AAGGAGTAACTGTCTA TGAA TCGATAGTTACTCCTTATTA TTTATTCATCATCCA TERM 1313 1119543 - 1119574 + T 95 -11 -4.22676 | opp_overlap 1119543, overlap 1119538 ATATAACTAATAAAA GGAGTAACTGTCTA TGAA TCGATAGTTACTCC TTATTATTTATTCAT TERM 1314 1119574 - 1119543 - T 95 -8.8 -4.82756 | opp_overlap 1119543 1119538 ATATAACTAATAAAA GGAGTAACTGTCTA TGAA TCGATAGTTACTCC TTATTATTTATTCAT SH1112 1120406 - 1119582 - | hypothetical protein TERM 1315 1120202 - 1120213 + g 74 -3 -5.32882 | CGTAACGATAACTAG GTAA GTAA TTAC TTTTTTCTACTGGTG SH1113 1120594 - 1121703 + | hypothetical protein SH1114 1121726 - 1122349 + | hypothetical protein SH1115 1122614 - 1123078 + | hypothetical protein TERM 1316 1124300 - 1124290 - g 84 -5.4 -5.41359 | AATTAAATGAAAAAA TGGA TAC TCCA ATCAGTAAGTTAACA SH1116 1123449 - 1124585 + | hypothetical protein SH1117 1124654 - 1124998 + | hypothetical protein TERM 1317 1125014 - 1125045 + F 100 -19 -5.24989 | opp_overlap 1125014 1125022 TTGTTAGCACAATAA GCTACAAAGCTTTC AATT GAAAGCTTTGTAGC TTTTTTAATATATAA TERM 1318 1125045 - 1125014 - f 100 -19 -3.84406 | opp_overlap 1125014, overlap 1125022 TTGTTAGCACAATAA GCTACAAAGCTTTC AATT GAAAGCTTTGTAGC TTTTTTAATATATAA TERM 1319 1125037 - 1125022 - f 75 -7.6 -4.02856 | opp_overlap 1125014, overlap 1125014 ACAATAAGCTACAAA GCTTTC AATT GAAAGC TTTGTAGCTTTTTTA SH1118 1125145 - 1126341 + | hypothetical protein SH1119 1126331 - 1129267 + | hypothetical protein cbf1 1129264 - 1130205 + | 3'-5' exoribonuclease YhaM TERM 1320 1130268 - 1130213 - T 72 -6.5 -4.31085 | gap 2, opp_overlap 1130213 TAGACTAATTTAAAA GCGTTTTTAC-C-TTACAATGTCAATT AATG AATAGACAATGTAGTGGGTAAAAACGC TTGTTTTATACAATT TERM 1321 1130213 - 1130268 + T 83 -8.7 -4.32669 | gap 2, opp_overlap 1130213 TAGACTAATTTAAAA GCGTTTTTA-CC-TTACAATGTCAATT AATG AATAGACAATGTAGTGGGTAAAAACGC TTGTTTTATACAATT TERM 1322 1130344 - 1130294 - T 84 -10.8 -2.74999 | gap 2, opp_overlap 1130293, overlap 1130298 CAATTTTGAACACGA GAAAGGGAGCAAGTCAATCAATTC GTTAA GAATTAA--GACTTGCTCCCTTAC GATTTAATGTTAATA TERM 1323 1130340 - 1130298 - T 91 -10.2 -4.06384 | gap 2, opp_overlap 1130293, overlap 1130294 TTTGAACACGAGAAA GGGAGCAAGTCAATCAATTC GTTAA GAATTAA--GACTTGCTCCC TTACGATTTAATGTT prsA 1131343 - 1130369 - | peptidyl-prolyl cis/trans isomerase TERM 1324 1131467 - 1131507 + r 100 -12.8 -2.83164 | opp_overlap 1131467 TTAAGCATTAAAAAA GTATCGAACTTGAGGCAT TATAT ATGTTTCAAGCTCGATAC TATGATACTCAGTGA TERM 1325 1131507 - 1131467 - R 100 -10.6 -5.2189 | opp_overlap 1131467 TTAAGCATTAAAAAA GTATCGAACTTGAGGCAT TATAT ATGTTTCAAGCTCGATAC TATGATACTCAGTGA SH1122 1132073 - 1131516 - | hypothetical protein TERM 1326 1132204 - 1132164 - R 70 -6.1 -4.24342 | TTTGGCATTAATAAA GAGAGTAGCGAAATATTCA TAA TGAATTCAACGCCACTCCC GTATCACAGTTTAAT SH1123 1132609 - 1132235 - | hypothetical protein SH1124 1133177 - 1132752 - | Hit-like protein involved in cell-cycle regulation SH1125 1133308 - 1134048 + | hypothetical protein SH1126 1134041 - 1135264 + | hypothetical protein TERM 1327 1135317 - 1135268 - T 85 -7.3 -4.93696 | gap 1, opp_overlap 1135268 CTTAAAGATTAAAAA GGTTGCCTA-TGACTAGAACAAGT TAA ACTAAATCTAGTTAACAGGCAACC TTTTTATTATTCCTT TERM 1328 1135268 - 1135317 + T 77 -5.1 -5.3321 | gap 1, opp_overlap 1135268 CTTAAAGATTAAAAA GGTTGCCTA-TGACTAGAACAAGT TAA ACTAAATCTAGTTAACAGGCAACC TTTTTATTATTCCTT traP 1135824 - 1135324 - | signal transduction protein TRAP hemE 1136112 - 1137146 + | uroporphyrinogen decarboxylase hemH 1137183 - 1138106 + | ferrochelatase TERM 1329 1139408 - 1139392 - g 70 -2.3 -5.38549 | GTCAAATAAGAAAAA TTCAACA ACA CGTTAAA AATAATTATTCTGCA hemY 1138125 - 1139519 + | protoporphyrinogen oxidase SH1131 1139619 - 1140179 + | hypothetical protein TERM 1330 1140230 - 1140251 + F 77 -5.1 -5.31855 | opp_overlap 1140230 TTTAAACTAATTTAA GTAGGGAGT TAAA GCTACCTAC TTTTTATTATTAATA TERM 1331 1140969 - 1140949 - f 70 -6.1 -4.19506 | opp_overlap 1140949 1140951 AGTTTAATGGCAAAA CCTCAGCCT TCC AAGCTGATG TTGTGGGTTCGATTC TERM 1332 1141077 - 1141090 + F 71 -8.1 -3.14881 | TCGAATCCTACCTGC GGAGC CATG GCTCC TTGGTCAAGCGGTTA TERM 1333 1141184 - 1141163 - f 72 -7.3 -4.07124 | opp_overlap 1141163 TAGGAGTCATACAAA CAGAAGTGA AATA TCGCTTCTG TTTTTTTATGTAATT TERM 1334 1141163 - 1141184 + F 100 -9.5 -5.75478 | opp_overlap 1141163 TAGGAGTCATACAAA CAGAAGTGA AATA TCGCTTCTG TTTTTTTATGTAATT TERM 1335 1141618 - 1141578 - f 84 -10.6 -3.10981 | opp_overlap 1141585, overlap 1141584 1141585 ATTTCAAAACAAGCA GAAAAAGGAGCTAGTGTA GTGGA TACGCTAGCTCTTTTCTC ATATCATATTAATAT TERM 1336 1141612 - 1141584 - f 80 -6 -5.05301 | opp_overlap 1141585, overlap 1141578 1141585 AAACAAGCAGAAAAA GGAGCTAGTGTA GTGGA TACGCTAGCTCT TTTCTCATATCATAT TERM 1337 1141611 - 1141585 - f 84 -9.5 -3.6074 | opp_overlap 1141585, overlap 1141584 1141578 AACAAGCAGAAAAAG GAGCTAGTGTA GTGGA TACGCTAGCTC TTTTCTCATATCATA TERM 1338 1141585 - 1141611 + F 100 -11.7 -4.52047 | opp_overlap 1141584 1141578 1141585 AACAAGCAGAAAAAG GAGCTAGTGTA GTGGA TACGCTAGCTC TTTTCTCATATCATA TERM 1339 1141892 - 1141923 + F 100 -14 -5.37593 | opp_overlap 1141922 TATCATAGCTTATTT GAGTTTAAAGTGGT AATC ATCACTTTAAACTC TTTTTTAATTTAAAA menE 1142095 - 1143489 + | O-succinylbenzoic acid-CoA ligase menC 1143491 - 1144498 + | O-succinylbenzoic acid (OSB) synthetase SH1134 1144731 - 1144495 - | hypothetical protein SH1135 1144798 - 1145271 + | hypothetical protein SH1136 1145252 - 1146022 + | hypothetical protein pckA 1147679 - 1146087 - | phosphoenolpyruvate carboxykinase TERM 1340 1147970 - 1148005 + G 89 -7.7 -5.27023 | gap 1, opp_overlap 1147972 CGAATGGACGTTTAA GAGCCTTCT-CTCTGT CTTGA ATAGTGAAGAAGGCTC TTTTATTTTTGAGCT SH1138 1147869 - 1148045 + | hypothetical protein metK 1148070 - 1149266 + | S-adenosylmethionine synthetase SH1140 1149360 - 1150268 + | hypothetical protein TERM 1341 1150344 - 1150356 + F 72 -3.4 -5.1925 | overlap 1150326 CTGAACTGAAAATGC GCTT AACTC AAGC TTTTTTCAGTTCTAG TERM 1342 1150382 - 1150424 + F 100 -9.4 -5.0925 | gap 2 TCTAGTCATCCTTGC GGGGGTGGGACGACGAATTT AAAAA GAATTC-T-GTCCCACTCCC TTTTTAATTTTGAGG SH1141 1150547 - 1151383 + | hypothetical protein TERM 1343 1151442 - 1151398 - T 100 -18.3 -5.38398 | opp_overlap 1151398 ATAAAAATATAAAAA TACACTTCATAGTTGCAAGAT TTA ATCTTAAAACTATGAAGTGTA TTTATTTATATCGAA TERM 1344 1151398 - 1151442 + T 100 -16.1 -4.62441 | opp_overlap 1151398 ATAAAAATATAAAAA TACACTTCATAGTTGCAAGAT TTA ATCTTAAAACTATGAAGTGTA TTTATTTATATCGAA SH1142 1151801 - 1151448 - | hypothetical protein SH1143 1152163 - 1151798 - | hypothetical protein SH1144 1152561 - 1152256 - | hypothetical protein SH1145 1152825 - 1153538 + | putative translaldolase SH1146 1153759 - 1154229 + | hypothetical protein SH1147 1154659 - 1154213 - | hypothetical protein SH1148 1155137 - 1154661 - | hypothetical protein SH1149 1155394 - 1155615 + | hypothetical protein TERM 1345 1155645 - 1155671 + F 82 -5.3 -5.45802 | opp_overlap 1155645 GCTTTATAGAATCAA GTAATGAAATT CTATA GGTTTCATTAC TTTTTATTTTGCAAA TERM 1346 1155856 - 1155841 - g 74 -3.2 -5.38249 | opp_overlap 1155845 ACGAAGCACAAAAAA GGCTCA ATTA TTAGCC TAGTGGGGTTATTGA gad 1155823 - 1156674 + | glucosaminidase TERM 1347 1156766 - 1156796 + F 100 -14.2 -5.20783 | opp_overlap 1156766 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1348 1156796 - 1156766 - f 100 -16.4 -4.30719 | opp_overlap 1156766 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1349 1156939 - 1156925 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 1350 1158201 - 1158171 - g 100 -12.8 -5.95946 | opp_overlap 1158170 1158169 TCAACAACAAAAAAA GAGATTAAACAACC TAA AGTTGCTTAATCTC AATATTTGGACTCAT tnp 1156881 - 1158197 + | transposase for ISSha1 SH1152 1158506 - 1159996 + | hypothetical protein TERM 1351 1160373 - 1160409 + F 100 -9.5 -4.67641 | GAATATACATTTGGT CTCCCTATGCCTTTAAG CAC TTTATTGGTATAGGGAG TTTTAATTTTGAGGT ribD 1160431 - 1161474 + | riboflavin specific deaminase ribB 1161481 - 1162113 + | riboflavin synthase subunit alpha ribA 1162129 - 1163310 + | riboflavin biosynthesis protein ribH 1163322 - 1163780 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 1352 1163829 - 1163788 - T 75 -5.2 -4.87893 | opp_overlap 1163790 1163794, overlap 1163790 1163794 AATTTTAATTAAAAA TACAAATCCTCGACAAAG TATTAG CAGTGTCGAGGATTTATT TTTTATCTTTTTAAT TERM 1353 1163790 - 1163827 + T 95 -6.3 -5.69068 | opp_overlap 1163790 1163788 1163794, overlap 1163794 TTTTAATTAAAAATA CAAATCCTCGACAAAGT ATTA GCAGTGTCGAGGATTTA TTTTTTATCTTTTTA TERM 1354 1163827 - 1163790 - T 75 -7.8 -4.05402 | opp_overlap 1163790 1163794, overlap 1163788 1163794 TTTTAATTAAAAATA CAAATCCTCGACAAAG TATTAG CAGTGTCGAGGATTTA TTTTTTATCTTTTTA TERM 1355 1163794 - 1163823 + T 91 -7.1 -5.19003 | opp_overlap 1163794 1163790 1163788, overlap 1163790 AATTAAAAATACAAA TCCTCGACAAAGT ATTA GCAGTGTCGAGGA TTTATTTTTTATCTT TERM 1356 1163823 - 1163794 - T 74 -6.4 -4.59653 | opp_overlap 1163790 1163794, overlap 1163790 1163788 AATTAAAAATACAAA TCCTCGACAAAG TATTAG CAGTGTCGAGGA TTTATTTTTTATCTT SH1157 1164833 - 1163832 - | hypothetical protein SH1158 1165059 - 1165886 + | hypothetical protein TERM 1357 1165998 - 1166038 + F 80 -5.7 -5.14563 | gap 2, opp_overlap 1166011 TTAGTCTTCCTTGAG GAGCTGGGACTAAGAATTC GATAA GAATTCT--GTTCTAGCTC TTTTTTGGTAAACAA rot 1166355 - 1166717 + | repressor of toxins Rot TERM 1358 1166854 - 1166819 - T 100 -12.8 -4.3739 | opp_overlap 1166822, overlap 1166822 GATTTTTCGACAAAA CAATCCACTCCATAAT TAAA ACTATGGAGTGGATTT TTTATATTATTTAAA TERM 1359 1166851 - 1166822 - T 100 -14.5 -4.30995 | opp_overlap 1166822, overlap 1166819 TTTTCGACAAAACAA TCCACTCCATAAT TAAA ACTATGGAGTGGA TTTTTTATATTATTT TERM 1360 1166822 - 1166851 + T 100 -12.3 -5.57729 | opp_overlap 1166822 1166819 TTTTCGACAAAACAA TCCACTCCATAAT TAAA ACTATGGAGTGGA TTTTTTATATTATTT SH1160 1167457 - 1166897 - | hypothetical protein TERM 1361 1167346 - 1167334 - G 76 -7.7 -3.96624 | CATGGCCATTAGAAA CTTGC TGT GCAAG AAATAACGTGTCGTT TERM 1362 1167362 - 1167350 - G 71 -6.3 -4.15044 | TTGCTGTGCAAGAAA TAACG TGT CGTTA CCATTGCCACAAGTA SH1161 1168413 - 1167454 - | hypothetical protein TERM 1363 1169334 - 1169364 + G 83 -6.4 -4.97666 | TTATTAAAAGGGAAT TTAAAATATCAAAT GTT AGTTGGTATTTTAA TTTTTATGCTGTCTT SH1162 1168524 - 1169711 + | hypothetical protein TERM 1364 1170081 - 1170071 - g 77 -5.4 -4.84311 | GGGCAGACAACAAAA CGTT TAA AACG AGTGATAATTTAGGA TERM 1365 1171641 - 1171651 + G 71 -6.8 -4.14725 | opp_overlap 1171629, overlap 1171624 ATATGCTAGATTCTG GCAC AAA GTGC TTTATGATTTAGGTG TERM 1366 1171865 - 1171882 + G 71 -8.5 -3.09288 | opp_overlap 1171864, overlap 1171864 1171872 1171873 CATGGAGTGAAAATG GTCTTGA TGGT TCAAGAC GTTTCTTAGACCGTG leuS 1170010 - 1172424 + | leucyl-tRNA synthetase TERM 1367 1172497 - 1172481 - g 79 -3.7 -5.54338 | overlap 1172484 CAATTAAAAGAAAAA GTATTAG AGT CTAATCC AGTGAATATTGTAGA SH1164 1172445 - 1172756 + | hypothetical protein TERM 1368 1172767 - 1172794 + F 100 -11.4 -5.54079 | opp_overlap 1172767 TTTAATCATGCATAA GCGACTGACA AATTCAAA TGTCAGTCGC TTTTTTGATTTTTAA TERM 1369 1172794 - 1172767 - f 93 -11.4 -3.39595 | opp_overlap 1172767 TTTAATCATGCATAA GCGACTGACA AATTCAAA TGTCAGTCGC TTTTTTGATTTTTAA TERM 1370 1173424 - 1173413 - g 82 -3 -5.64304 | CAACAGAAGAAAAAA CATT ATCA AATG AAAAGAGTATTAAGG TERM 1371 1175908 - 1175881 - g 73 -7.8 -3.77831 | gap 1 GCAGCAATAGCGAAA GTTGATGCAGCTG TAA CAGCTGCAA-AAC AAGCAATTACACAAG TERM 1372 1176673 - 1176659 - g 77 -8.6 -3.67737 | opp_overlap 1176658 TACAAAATTCTGAAA CTGCTA CAA TAGCAG GTATTCAAGTAGATG SH1165 1172983 - 1179453 + | hypothetical protein TERM 1373 1179474 - 1179501 + F 100 -8.5 -5.28683 | opp_overlap 1179474 GAATTTATTTGGAAA TCAGACTTCAC ATAATA GTGGGGTCTGA TTTTTTAGTATTAAT TERM 1374 1179993 - 1179982 - g 70 -4.4 -4.77775 | overlap 1179988 1179989 ATTCTATAAAAGAAA TAGC AACC GCTA TTAAAATTAATAATA SH1166 1179741 - 1187570 + | hypothetical protein TERM 1375 1187611 - 1187660 + T 100 -16.9 -5.11112 | opp_overlap 1187614, overlap 1187614 TGCAAGATGAATAGT AAACTCCCTAAGATTATTCTA CATATTAC TAGAATAATCTTAGGGAGTTC TTTTTATTAAAATTT TERM 1376 1187614 - 1187657 + T 100 -18.6 -4.63592 | opp_overlap 1187614, overlap 1187611 AAGATGAATAGTAAA CTCCCTAAGATTATTCTA CATATTAC TAGAATAATCTTAGGGAG TTCTTTTTATTAAAA TERM 1377 1187657 - 1187614 - T 100 -18.6 -3.96696 | opp_overlap 1187611 1187614 AAGATGAATAGTAAA CTCCCTAAGATTATTCTA CATATTAC TAGAATAATCTTAGGGAG TTCTTTTTATTAAAA SH1167 1188917 - 1187667 - | hypothetical protein TERM 1378 1188047 - 1188061 + g 70 -3.6 -4.92669 | ATTTATCAGGTTCTT CATTTA AAA TAGATG TTATTTTTTTCTCTA SH1168 1189191 - 1190828 + | hypothetical protein rsuA 1190825 - 1191517 + | 16S rRNA uridine-516 pseudouridylate synthase family protein TERM 1379 1191830 - 1191811 - g 70 -2.2 -5.34365 | overlap 1191826 TTAGAAGAAGAAAAA TCAAAATT TACT AATTTAGA TGCTAATAAAGAAGA SH1170 1191538 - 1191963 + | hypothetical protein TERM 1380 1191989 - 1192019 + F 100 -10.7 -5.68438 | gap 1 ATCTAAGATGTTTTT GAACCTGA-ACATT GAAA AATGTATCAGGTTC TTTTTTATTTAATAA SH1171 1192254 - 1193663 + | dipeptidase PepV dat 1193667 - 1194515 + | D-amino acid aminotransferase SH1173 1195036 - 1195761 + | hypothetical protein SH1174 1195776 - 1196420 + | hypothetical protein TERM 1381 1196436 - 1196459 + F 70 -8.4 -2.75528 | opp_overlap 1196436 1196435 CATTAGTTAGTAAAG TTTCAATAAT AAGT ATTATTGAAA TAATGTATTACAAAT TERM 1382 1196459 - 1196436 - f 71 -8.4 -2.85996 | opp_overlap 1196436, overlap 1196435 CATTAGTTAGTAAAG TTTCAATAAT AAGT ATTATTGAAA TAATGTATTACAAAT TERM 1383 1196539 - 1196582 + F 100 -15.6 -4.94811 | gap 1, opp_overlap 1196544 1196553 1196556 GTTCTAATCACCCTA CAGGAGTGGTACAATGATTCA TTA TGAATGAT-GTGCCACTCCTG TTTATTTATTTTTAA TERM 1384 1197056 - 1197088 + G 81 -10.7 -2.64803 | overlap 1197053 1197050 CTCAATTTTTTCGAA TGCTACTCATTTTGT GCA ACAAGACGAGTGGCA TGAATTTACAAGTCC SH1175 1196673 - 1197494 + | hypothetical protein TERM 1385 1197601 - 1197558 - T 78 -4.6 -5.50499 | gap 1, opp_overlap 1197559, overlap 1197559 TTACATGTAAAAAAA TGGTAAGAGGAGTGGGCA-TA TTT TATTTCCCACTTCTCTTGCCT TTTACTTTATTATAA TERM 1386 1197600 - 1197559 - T 78 -8.1 -3.89215 | gap 1, opp_overlap 1197559, overlap 1197558 TACATGTAAAAAAAT GGTAAGAGGAGTGGGCA-TA TTT TATTTCCCACTTCTCTTGCC TTTTACTTTATTATA TERM 1387 1197559 - 1197600 + T 100 -12.5 -4.70353 | gap 1, opp_overlap 1197559 1197558 TACATGTAAAAAAAT GGTAAGAGGAGTGGGCATAT TTT AT-TTCCCACTTCTCTTGCC TTTTACTTTATTATA SH1176 1197928 - 1197611 - | hypothetical protein SH1177 1198003 - 1199088 + | hypothetical protein SH1178 1199102 - 1199413 + | hypothetical protein TERM 1388 1199582 - 1199558 - g 77 -5.8 -4.66057 | opp_overlap 1199558 1199557 AGAGATAAATTAAAA CAACGTTTAG CGCAT CTAAATGTTG ATTTTAAATTTGATC TERM 1389 1199558 - 1199582 + G 70 -8 -3.21904 | opp_overlap 1199558, overlap 1199557 AGAGATAAATTAAAA CAACGTTTAG CGCAT CTAAATGTTG ATTTTAAATTTGATC SH1179 1199525 - 1200382 + | hypothetical protein SH1180 1200404 - 1201000 + | hypothetical protein TERM 1390 1203946 - 1203926 - g 79 -9.9 -3.18199 | opp_overlap 1203930, overlap 1203930 1203937 CAATGGGTAATCGAA TCAATAATG AAC CATTATTGA TGGACATAGCTAAAA SH1181 1201021 - 1204914 + | hypothetical protein TERM 1391 1205539 - 1205529 - g 79 -5.4 -5.11033 | CACAATGTCAAAAAA GCAA TTA TTGC TTGGGGTGATGATGA murC 1204935 - 1206248 + | UDP-N-acetylmuramate--L-alanine ligase SH1183 1206330 - 1206836 + | hypothetical protein TERM 1392 1206853 - 1206885 + F 100 -10.1 -4.77165 | opp_overlap 1206853 1206852 ATGATTCAATCAAAT GCACTTAAATGAG GTTTTTA CTTATTTAAGTGC TTTTCTTATAGGAGG TERM 1393 1207707 - 1207697 - g 73 -4 -5.15969 | GCTGAAGCTAAAAAA GATT CAA AATC GAAAGAAATTAGTGC SH1184 1206908 - 1208500 + | hypothetical protein TERM 1394 1208544 - 1208591 + F 100 -8.8 -5.36441 | gap 1, opp_overlap 1208544 TATTCATTCATTATA TGGAGTGGATTCAGAAATCTA TATATAT TAGATTTTTGA-TTCGCTCCA TTTTTTATATCGAAA aroA 1208783 - 1209874 + | bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase TERM 1395 1210537 - 1210517 - g 72 -2.7 -5.21459 | overlap 1210520 AAAAAGAAAAAGAAA TATTTAATA ATT TATTAAGTA AACAAGTAGATGGTA ccpA 1210195 - 1211187 + | catabolite control protein A TERM 1396 1211285 - 1211337 + T 100 -27.5 -2.99471 | opp_overlap 1211293, overlap 1211289 TAAGTTATAGTTGTT TTAAGGGAGCGGTATGATGATTTTA AAA TTAAATCATCATACCGCTCCCTTAG TGTGTATACCAATGA TERM 1397 1211289 - 1211333 + T 100 -26.1 -3.35197 | opp_overlap 1211293, overlap 1211285 TTATAGTTGTTTTAA GGGAGCGGTATGATGATTTTA AAA TTAAATCATCATACCGCTCCC TTAGTGTGTATACCA TERM 1398 1211329 - 1211293 - T 100 -18.3 -2.52543 | opp_overlap 1211289 1211285 AGTTGTTTTAAGGGA GCGGTATGATGATTTTA AAA TTAAATCATCATACCGC TCCCTTAGTGTGTAT TERM 1399 1211347 - 1211376 + T 71 -4.4 -4.98522 | CCTTAGTGTGTATAC CAATGAACGA TTCTACTTGC TCGTTCGTTG TTTTTCTGTGAGATT acuC 1212491 - 1211334 - | acetoin utilization protein TERM 1400 1211457 - 1211474 + g 71 -3.3 -5.18357 | TTTAGGTAGGTTTAC TGGTGAG TACG CACGCCA TTTTTTAATCCATTG acuA 1213158 - 1212526 - | acetoin dehydrogenase acsA 1213323 - 1215032 + | acetyl-CoA synthetase TERM 1401 1215053 - 1215076 + F 100 -9.6 -5.2189 | opp_overlap 1215049 1215053 AATGAATATAAGTAA GCTAGGACAA TTAT TGGTCCTAGC TTTTTTAATGATTAA TERM 1402 1215076 - 1215053 - f 84 -9.6 -3.56056 | opp_overlap 1215053, overlap 1215049 AATGAATATAAGTAA GCTAGGACAA TTAT TGGTCCTAGC TTTTTTAATGATTAA TERM 1403 1215451 - 1215438 - g 84 -8.1 -4.60924 | GAAATCGCTGAAAAA GCTGG AATC CCAGC AGACGCATTAGAACA fhs 1215366 - 1217033 + | formate--tetrahydrofolate ligase TERM 1404 1217083 - 1217113 + T 100 -12 -5.68039 | opp_overlap 1217083 ATGTTACGTTGAAAA CTGTCGACAAAG CGCAAAA CTTTGTCGGCAG TTTTTTTATGAATTT TERM 1405 1217113 - 1217083 - T 91 -10.5 -4.11394 | opp_overlap 1217083 ATGTTACGTTGAAAA CTGTCGACAAAGC GCAAA ACTTTGTCGGCAG TTTTTTTATGAATTT sgtA 1218090 - 1217176 - | hypothetical protein TERM 1406 1218372 - 1218401 + H 100 -9.3 -5.65496 | TGGTAACGTGCTCAA GCGCCCTTACATT TAAC GATGTATGGGTGC TTTTTATTTTTCATA tyrS 1218473 - 1219735 + | tyrosyl-tRNA synthetase TERM 1407 1219752 - 1219791 + F 78 -5.8 -4.83615 | gap 1, opp_overlap 1219762, overlap 1219753 AAGGTGTAATTTTAT TGGCAATGTAGCGAAATCT TAT AGACTTTGC-GCATTGCCC TTTTTATGAAAAATA TERM 1408 1219753 - 1219790 + F 82 -9.3 -3.49687 | gap 1, opp_overlap 1219762, overlap 1219752 AGGTGTAATTTTATT GGCAATGTAGCGAAATCT TAT AGACTTTGC-GCATTGCC CTTTTTATGAAAAAT SH1193 1219887 - 1220330 + | hypothetical protein TERM 1409 1220348 - 1220368 + F 100 -9.8 -4.76087 | opp_overlap 1220348 GATTAAACTTAAAAA CTCGCTTA CAAGT TAAGCGAG TTTATTTGTTATATA TERM 1410 1220368 - 1220348 - f 100 -9.8 -4.82855 | opp_overlap 1220348 GATTAAACTTAAAAA CTCGCTTA CAAGT TAAGCGAG TTTATTTGTTATATA SH1194 1220531 - 1221859 + | hypothetical protein TERM 1411 1221905 - 1221870 - f 100 -13.5 -3.77722 | opp_overlap 1221870 TTTAAGCATTAAGAA GGCCAGTAATTGATT TTGAAT AATCATTTACTGGCC TTATGAGTAAATTCT TERM 1412 1221870 - 1221905 + F 100 -13.5 -3.38118 | opp_overlap 1221870 TTTAAGCATTAAGAA GGCCAGTAATTGATT TTGAAT AATCATTTACTGGCC TTATGAGTAAATTCT TERM 1413 1221965 - 1221996 + F 100 -13.2 -5.20783 | opp_overlap 1221965 AGGCTCTATAATAAA TTGGACTGATGACT AAAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1414 1221996 - 1221965 - f 100 -15.4 -4.30987 | opp_overlap 1221965 AGGCTCTATAATAAA TTGGACTGATGACT AAAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 1415 1222140 - 1222126 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 1416 1223371 - 1223403 + G 81 -10.7 -2.63089 | opp_overlap 1223372, overlap 1223370 1223368 CTCAACAACAAAAAA AGAGATTAAACAACC TAA GGTTGCTTAATCTCA ATATTTGGACTCATC TERM 1417 1223402 - 1223372 - g 100 -16.4 -5.95946 | opp_overlap 1223371 1223370 1223368 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTTGGACTCAT tnp 1222082 - 1223398 + | transposase for ISSha1 SH1196 1224713 - 1223385 - | hypothetical protein TERM 1418 1225217 - 1225197 - g 79 -3.9 -5.40279 | overlap 1225199 TAAAAGAAAATAAAA CTGTTGGTA TCT TCCCAACGG GACATCGTACATCAG SH1197 1224881 - 1225504 + | hypothetical protein TERM 1419 1225530 - 1225569 + F 77 -3.1 -5.63236 | gap 1, opp_overlap 1225526, overlap 1225523 CTAATTAACAATAAA CACTCTATTTA-ATGACT CTAAT AGTTATTTTAATAGGGTG TTTTTGTTTTTAAAT ptaA 1225840 - 1227303 + | PTS system, N-acetylglucosamine-specific IIABC component TERM 1420 1227440 - 1227405 - f 95 -12.1 -3.33696 | opp_overlap 1227405 CTGTTGTTCAATTAA CTGATGAATTTTAGG AGGCTA CCTAGAATTCATCAG TTTTTTATTATTGAC TERM 1421 1227405 - 1227440 + F 100 -14.3 -5.64873 | opp_overlap 1227405 CTGTTGTTCAATTAA CTGATGAATTTTAGG AGGCTA CCTAGAATTCATCAG TTTTTTATTATTGAC SH1199 1227520 - 1228644 + | hypothetical protein TERM 1422 1228686 - 1228729 + T 76 -8.9 -2.96031 | opp_overlap 1228686 1228712, overlap 1228685 1228683 1228688 AATCATTAGTATTAA TACGCCCCTCAGTGATGAA GTAAAA TCCATCATAGAGGGGCATA ATTATTTCAAGTAGA TERM 1423 1228729 - 1228686 - T 90 -11.1 -3.2396 | opp_overlap 1228685 1228683 1228686 1228688, overlap 1228712 AATCATTAGTATTAA TACGCCCCTCAGTGATGAA GTAAAA TCCATCATAGAGGGGCATA ATTATTTCAAGTAGA serA 1230371 - 1228773 - | D-3-phosphoglycerate dehydrogenase SH1201 1231521 - 1230361 - | hypothetical protein SH1202 1232077 - 1231637 - | hypothetical protein SH1203 1232156 - 1232902 + | hypothetical protein tnp 1234597 - 1232918 - | IS1272 transposase TERM 1424 1233001 - 1232969 - G 93 -8 -5.55698 | opp_overlap 1232969 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 1425 1232969 - 1233001 + g 90 -8 -5.35222 | opp_overlap 1232969 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 1426 1233711 - 1233697 - G 77 -5.8 -4.75289 | CATTATAAGATAAAA CAAATT GGG AATTTG TCGCTATTTGTAAAT TERM 1427 1234465 - 1234481 + g 70 -8.1 -3.32066 | CACCACGGTGATGTC TGAATTC GTC GAATTCA TTGTCAGGAATTGTT SH1205 1234830 - 1234681 - | hypothetical protein TERM 1428 1234841 - 1234800 - G 100 -11.1 -4.44448 | opp_overlap 1234801 1234803, overlap 1234803 AGTATTGTAAATAAA GAAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTAT TTCTCTAGGGTTTAT TERM 1429 1234801 - 1234840 + g 100 -12.4 -4.07562 | opp_overlap 1234800 1234803, overlap 1234803 GTATTGTAAATAAAG AAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTA TTTCTCTAGGGTTTA TERM 1430 1234803 - 1234838 + g 100 -15 -3.62348 | opp_overlap 1234800 1234803, overlap 1234801 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT TERM 1431 1234838 - 1234803 - G 100 -17.2 -4.33281 | opp_overlap 1234803 1234801, overlap 1234800 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT rpsD 1235486 - 1234884 - | 30S ribosomal protein S4 SH1207 1236178 - 1235711 - | hypothetical protein TERM 1432 1237922 - 1237904 - g 76 -6.8 -4.56775 | opp_overlap 1237907 ACGCTTGTTTAAAAA TAATCGTT ACA AACGATCA ATTGAAATTTCAGAA SH1208 1236309 - 1238003 + | septation ring formation regulator EzrA TERM 1433 1238054 - 1238031 - f 74 -4 -5.20333 | opp_overlap 1238031 TATTGACAATAAAAA TTTATAACTT TGGT AAGTAATAAA TGTTAGGTTAAAGCA TERM 1434 1238092 - 1238128 + F 82 -5.4 -5.48163 | gap 2, opp_overlap 1238103 AGTAGTCTATTTTGA GGTGGGATAATGAATTCG TAA TGAATTC-T-ATCCCATC TTTTTTGATTTGTTT SH1209 1238379 - 1239515 + | hypothetical protein SH1210 1239516 - 1240739 + | hypothetical protein SH1211 1240781 - 1241557 + | hypothetical protein SH1212 1241648 - 1242142 + | hypothetical protein SH1213 1242275 - 1243222 + | hypothetical protein SH1214 1243304 - 1244500 + | acetate kinase TERM 1435 1244549 - 1244512 - T 70 -8.6 -2.50338 | opp_overlap 1244513, overlap 1244511 1244505 1244518 ATAATTTATTAATAC TGACAACATGCATTGT AATTGG ACAATGTATGTTGTCT TTTTTAAATAAAATT TERM 1436 1244513 - 1244548 + T 100 -14.3 -5.09225 | opp_overlap 1244512 1244511 1244505 1244518 TAATTTATTAATACT GACAACATGCATTGT AATTGG ACAATGTATGTTGTC TTTTTTAAATAAAAT TERM 1437 1244610 - 1244577 - T 88 -9.1 -4.55697 | gap 1, opp_overlap 1244580, overlap 1244580 ATTGTGACAAATAAA TAATGACGATAAAGTC AAA GACCTTATCGCCAT-A TTAAACTCACTTTGT TERM 1438 1244580 - 1244608 + T 76 -8.9 -3.07236 | opp_overlap 1244577 1244580 GTGACAAATAAATAA TGACGATAAAGTC AAA GACCTTATCGCCA TATTAAACTCACTTT TERM 1439 1244608 - 1244580 - T 100 -13.3 -4.38748 | opp_overlap 1244580, overlap 1244577 GTGACAAATAAATAA TGACGATAAAGTC AAA GACCTTATCGCCA TATTAAACTCACTTT SH1215 1245146 - 1244649 - | hypothetical protein TERM 1440 1244990 - 1245013 + g 73 -8.2 -3.68569 | CAGTGAATTGTGCAT CGTATACTTC ATAA GAAGAATACG TTCTTGAATCGATAA ald 1245290 - 1246411 + | alanine dehydrogenase TERM 1441 1246426 - 1246481 + T 100 -9.3 -5.40464 | opp_overlap 1246419 1246433, overlap 1246433 ATAATTGATTTAATA TAAATAATCCAGTTGAGTACATAGT TATTTT ACTATTAACTCAACTGGATTTTTAA TTTTTATTTATCATA TERM 1442 1246474 - 1246433 - T 100 -11.8 -4.22375 | opp_overlap 1246426 1246433 ATTTAATATAAATAA TCCAGTTGAGTACATAGT TATTTT ACTATTAACTCAACTGGA TTTTTAATTTTTATT TERM 1443 1246433 - 1246474 + T 100 -11.8 -5.24003 | opp_overlap 1246433, overlap 1246426 ATTTAATATAAATAA TCCAGTTGAGTACATAGT TATTTT ACTATTAACTCAACTGGA TTTTTAATTTTTATT SH1217 1247540 - 1246485 - | hypothetical protein SH1218 1247695 - 1248384 + | hypothetical protein TERM 1444 1248429 - 1248478 + T 72 -6.9 -4.11773 | gap 1, opp_overlap 1248435, overlap 1248433 1248435 TTAGTTTAATGAAAT TAATAAGCACAAAGGTGATT TATACATGAAC AATCATCTTTGTGC-TATTA TTTTGACGCATCTTT TERM 1445 1248435 - 1248473 + T 76 -8.4 -3.68435 | opp_overlap 1248435, overlap 1248433 1248429 TAATGAAATTAATAA GCACAAAGGTGATT TATACATGAAC AATCATCTTTGTGC TATTATTTTGACGCA TERM 1446 1248533 - 1248549 + T 70 -6.6 -3.97636 | ATCAGTACAGGGATG GTAGCA CGTTT TGCTAC TTTATGACTTACACT SH1219 1248921 - 1248508 - | hypothetical protein SH1220 1249150 - 1250454 + | hypothetical protein SH1221 1250492 - 1251430 + | hypothetical protein TERM 1447 1254456 - 1254445 - g 70 -4.4 -4.78981 | AGTAACTAAAATAAA TGAG GCAT CTCA AATTATTTTAAGAAA dnaE 1251452 - 1254655 + | DNA polymerase III, alpha chain TERM 1448 1254731 - 1254674 - f 100 -9.7 -5.64274 | gap 1, opp_overlap 1254685 1254689, overlap 1254678 TTATGTATAAAAAAA TTATGATATAGTAAACTGATGA-TTTAT AAA ATAAAGTCATCAGTTTATTTTATCTTAA AAAATTTTAAATGCA TERM 1449 1254727 - 1254678 - f 81 -10.5 -2.72537 | gap 1, opp_overlap 1254685 1254689, overlap 1254674 GTATAAAAAAATTAT GATATAGTAAACTGATGA-TTTAT AAA ATAAAGTCATCAGTTTATTTTATC TTAAAAAATTTTAAA TERM 1450 1254685 - 1254720 + F 100 -11.6 -4.66537 | gap 1, opp_overlap 1254678 1254674, overlap 1254689 AAAATTATGATATAG TAAACTGATGA-TTTAT AAA ATAAAGTCATCAGTTTA TTTTATCTTAAAAAA TERM 1451 1254689 - 1254716 + F 91 -8 -4.88163 | gap 1, opp_overlap 1254678 1254674, overlap 1254685 TTATGATATAGTAAA CTGATGA-TTTAT AAA ATAAAGTCATCAG TTTATTTTATCTTAA SH1223 1254812 - 1256041 + | hypothetical protein TERM 1452 1256732 - 1256718 - g 71 -6.4 -4.17089 | overlap 1256719 TGCAAATGGGTAAAA CCAGTG TTT CACTGA AACGTCACTCAGATG accB 1256168 - 1257034 + | acetyl-CoA carboxylase subunit beta accA 1257027 - 1257974 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha pfkA 1258306 - 1259229 + | 6-phosphofructokinase pykA 1259248 - 1261008 + | pyruvate kinase TERM 1453 1260990 - 1261003 + F 70 -6.7 -4.0075 | TAAAATATTTGAAGG GTACG CTAA CGTAC TTTAATTCATTAAAT TERM 1454 1261113 - 1261144 + F 82 -5.3 -5.41359 | gap 1 CAATAATTGATTAAA CTGGGAATAAGCTC GTGAA GAGTTT-TTCTCAG TTTTTTCATTTCATT SH1228 1261298 - 1262275 + | hypothetical protein TERM 1455 1262369 - 1262326 - T 95 -8.4 -4.91109 | opp_overlap 1262327 1262329, overlap 1262329 GGTTTATTACAAAAA CAAGCCAGTAAATGAATT TTTATGTT AATTCATTTACTGGCTAT TATAATCTCGTAAGA TERM 1456 1262327 - 1262368 + T 95 -11.9 -3.484 | opp_overlap 1262326 1262329, overlap 1262329 GTTTATTACAAAAAC AAGCCAGTAAATGAATT TTTATGTT AATTCATTTACTGGCTA TTATAATCTCGTAAG TERM 1457 1262329 - 1262366 + T 100 -14.5 -3.31365 | opp_overlap 1262326 1262329, overlap 1262327 TTATTACAAAAACAA GCCAGTAAATGAATT TTTATGTT AATTCATTTACTGGC TATTATAATCTCGTA TERM 1458 1262366 - 1262329 - T 100 -14.5 -4.56153 | opp_overlap 1262329 1262327, overlap 1262326 TTATTACAAAAACAA GCCAGTAAATGAATT TTTATGTT AATTCATTTACTGGC TATTATAATCTCGTA aapA 1263751 - 1262393 - | D-serine/D-alanine/glycine transporter TERM 1459 1264675 - 1264689 + G 74 -5.6 -4.65458 | overlap 1264677 ATGCTTCTGCATTTA CTGCAC GTT GTGCCG TTTCTTCTTTATCTG citZ 1264101 - 1265219 + | methylcitrate synthase citC 1265263 - 1266531 + | isocitrate dehydrogenase TERM 1460 1266660 - 1266694 + F 82 -5.3 -5.55769 | gap 2, opp_overlap 1266660 1266662, overlap 1266652 1266670 CAATTTTTAACAAAA GTGGAACATTGAATTTA TAT TAAATTC--TGTTCCGC TTTTTTATTATGAAG phoP 1266901 - 1267611 + | alkaline phosphatase synthesis transcriptional regulatory protein phoR 1267611 - 1269308 + | alkaline phosphatase synthesis sensor protein TERM 1461 1269388 - 1269436 + F 100 -6.2 -5.96894 | gap 1 ATACAATTATTTTAA GGCCTTTCGTATACTTGCACCAA AAAT TTGGT-TGAGGATATGAAAGCCC TTTTTTTATTTAAAT TERM 1462 1270375 - 1270363 - g 75 -4.9 -4.91194 | ATAATAAAGATAAAA TTGAA TTA TTCAA AAAGTTAGAATTCAA polA 1269552 - 1272182 + | DNA polymerase I SH1235 1272198 - 1273070 + | hypothetical protein SH1236 1273087 - 1273695 + | hypothetical protein SH1237 1273787 - 1273891 + | hypothetical protein gapB 1273916 - 1274941 + | glyceraldehyde 3-phosphate dehydrogenase 2 TERM 1463 1274963 - 1275006 + F 100 -11.3 -5.38839 | opp_overlap 1274965, overlap 1274965 ATCACTATAAATTAA AACGAGACTGTTAAATCTT TTGACT AAGATTTGATAGTCTCGTA TTTTATTTTTATGTG TERM 1464 1275004 - 1274965 - f 100 -9.5 -4.63479 | opp_overlap 1274965 1274963 CACTATAAATTAAAA CGAGACTGTTAAATCTT TTGACT AAGATTTGATAGTCTCG TATTTTATTTTTATG TERM 1465 1274965 - 1275004 + F 100 -13.9 -4.29117 | opp_overlap 1274965, overlap 1274963 CACTATAAATTAAAA CGAGACTGTTAAATCTT TTGACT AAGATTTGATAGTCTCG TATTTTATTTTTATG SH1239 1275197 - 1275667 + | transcriptional regulator NrdR TERM 1466 1276221 - 1276211 - g 91 -5.4 -5.77571 | opp_overlap 1276211 1276209 ATTAAAAAAGAAAAA CCAT ATC ATGG TATTGATTTATCCAA dnaB 1275668 - 1277053 + | chromosome replication initiation/membrane attachment protein dnaI 1277054 - 1277974 + | primosomal protein DnaI TERM 1467 1278186 - 1278167 - f 70 -8 -3.00774 | overlap 1278169 TATCTTAAGTAGAGA TATTTAGC TATT GCTAAATA ACTAGGGTGGTACCA TERM 1468 1278209 - 1278233 + F 100 -10 -5.63517 | opp_overlap 1278209, overlap 1278203 1278202 TGGTACCACGACGAA CTCGTCCCTT TTTTT AGGGGGCGAG TTTTTTATTTCAACG thrS 1278296 - 1280233 + | threonyl-tRNA synthetase 1 SH1243 1280352 - 1280459 + | hypothetical protein TERM 1469 1280497 - 1280470 - f 91 -11.4 -2.96235 | opp_overlap 1280470, overlap 1280465 CATAGATTAAGCAGA TGGTTGCATATC TAAA GGTATGCAACCA TTTTTTTATGCTTTA TERM 1470 1280470 - 1280497 + F 100 -13.6 -5.75599 | opp_overlap 1280465 1280470 CATAGATTAAGCAGA TGGTTGCATATC TAAA GGTATGCAACCA TTTTTTTATGCTTTA TERM 1471 1280987 - 1281011 + G 70 -7.2 -3.71213 | gap 1 ATTCAATATTGGACA CCTATGGCTGG TATT CCAGC-ATGGG TTTGGAGTTGTATAT lysP 1280618 - 1282111 + | lysine-specific permease TERM 1472 1282268 - 1282290 + G 100 -14.2 -4.8622 | opp_overlap 1282268 ATGTGTATGAGAGAA GAGCGGGCAT TCT ATGCTCGCTC TTTTTGCTTGGAAAA TERM 1473 1282290 - 1282268 - g 91 -12 -3.54653 | opp_overlap 1282268 ATGTGTATGAGAGAA GAGCGGGCAT TCT ATGCTCGCTC TTTTTGCTTGGAAAA TERM 1474 1282765 - 1282754 - g 73 -4.4 -4.91109 | CGCGTATTAGAAAAA TTCG CTGA CGAA TGTAAAGATATTGCC infC 1282259 - 1282852 + | translation initiation factor IF-3 TERM 1475 1283013 - 1283003 - g 82 -5.4 -5.37171 | AACACTAAACAAAAA CGTA AAT TACG TAAAGCTAAATTAGT rpmI 1282880 - 1283080 + | 50S ribosomal protein L35 rplT 1283135 - 1283491 + | 50S ribosomal protein L20 TERM 1476 1283522 - 1283505 - f 83 -8.5 -4.43501 | opp_overlap 1283505 AATTGATTTATAAAA GATGACT TTGA AGTCATC TTTTTTTGTTTTCAA TERM 1477 1283505 - 1283522 + F 100 -8.5 -6.09196 | opp_overlap 1283505 AATTGATTTATAAAA GATGACT TTGA AGTCATC TTTTTTTGTTTTCAA SH1248 1283642 - 1284250 + | hypothetical protein TERM 1478 1284687 - 1284675 - g 71 -7.7 -3.55265 | opp_overlap 1284675 ATAAACATATCACAA GCCAA TCA TTGGC TAAATTTAATACACT SH1249 1284263 - 1285186 + | hypothetical protein tig 1285345 - 1286649 + | trigger factor TERM 1479 1287063 - 1287047 - g 83 -5.9 -5.06816 | ATTGGTCAAGAAAAA GCTAAAA AAT CTTTAGC AGTTGCAGTATATAA clpX 1286807 - 1288069 + | ATP-dependent protease ATP-binding subunit TERM 1480 1288215 - 1288245 + T 100 -16.4 -5.95946 | opp_overlap 1288213 1288223 1288224 ATGAGTCCTAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 1289121 - 1288219 - | transposase for ISSha1 TERM 1481 1289182 - 1289198 + r 71 -4.5 -4.88918 | TTCTTATGCTTTATT TAAAACT GCA AGTTTTG TTTTATTTGAAATAA tnp 1289535 - 1289170 - | transposase for ISSha1 TERM 1482 1289623 - 1289652 + H 100 -13.8 -4.30719 | opp_overlap 1289623 TCAAAAACATAAAAA TTGGACTGATGA ATTTTG TCATCAGTCCAA TTTATTATAGAACCG TERM 1483 1289652 - 1289623 - H 100 -13.8 -5.36364 | opp_overlap 1289623 TCAAAAACATAAAAA TTGGACTGATGA ATTTTG TCATCAGTCCAA TTTATTATAGAACCG SH1254 1289774 - 1290361 + | GTPase EngB TERM 1484 1290371 - 1290399 + F 100 -11.9 -5.15634 | TTATAATTATTTTAA TCTAAGCAGAGGT CAA ACTTCTGTTTAGA TTTTTTAATGGGATA TERM 1485 1290438 - 1290452 + F 70 -5.8 -4.42062 | opp_overlap 1290438, overlap 1290434 AATTTTGACTTTAAA TTAGAA TCT TTCTAA TTTGTTTGAGCAATC hemA 1290532 - 1291878 + | glutamyl-tRNA reductase TERM 1486 1292029 - 1292057 + G 100 -9.7 -4.3207 | opp_overlap 1292029 GGAATTTATACATTA GGGATTGTTTGGA TAT TGCAAACAATCTC TTTATCTGTTTATAT hemX 1291900 - 1292712 + | hemA concentration negative effector hemC 1292743 - 1293675 + | porphobilinogen deaminase TERM 1487 1293864 - 1293854 - g 76 -6.8 -4.56597 | opp_overlap 1293852 1293854 TTTTTCTTCTAAAAA TGCG GTT CGCA TATTTTATAAATATT hemD 1293702 - 1294382 + | uroporphyrinogen III synthase hemB 1294372 - 1295346 + | delta-aminolevulinic acid dehydratase hemL 1295369 - 1296652 + | glutamate-1-semialdehyde aminotransferase TERM 1488 1296668 - 1296706 + F 77 -6.2 -4.72272 | gap 1, opp_overlap 1296663 1296668 TGTTATGAAATAAAA TGAGGTTAGGACTTTCA ACTAGA TGAC-GTCTTAACCTCA TTTTTAATGAAAGAA TERM 1489 1296836 - 1296856 + G 72 -9.1 -2.76249 | CATTTATGTTCGGTC CGATTATTG CAT CGATAATCG TCATTAAAGTATTTA SH1261 1296733 - 1297809 + | hypothetical protein tag 1298490 - 1297936 - | DNA-3-methyladenine glycosidase TERM 1490 1298752 - 1298779 + H 95 -6.4 -5.71638 | gap 1, opp_overlap 1298752 1298754, overlap 1298747 1298742 GGTGGTACCACGGAA CATCCGTCCTATA TTA TTTAGGA-GGATG TTTTTTTAATTATTA valS 1298809 - 1301439 + | valyl-tRNA synthetase TERM 1491 1302242 - 1302230 - g 74 -3.4 -5.32396 | opp_overlap 1302230 1302239 ACATCAAAAAGAAAA TGCA GCGCT TGCA ATTACTGCATTGATT folC 1301451 - 1302713 + | folylpolyglutamate synthase TERM 1492 1302727 - 1302775 + F 70 -5.5 -4.57482 | gap 1, opp_overlap 1302727 1302729 AAATTTGAAATAGTA TATCCTCAAGTCATTTAGGCTA ACTTTA TA-CCTATGTGACTCGGGGATA TTTGTTTATCACTAA SH1265 1302912 - 1303601 + | hypothetical protein TERM 1493 1303943 - 1303924 - g 73 -4.4 -4.88217 | gap 1, opp_overlap 1303927 1303929, overlap 1303927 ATGAAAAAATTAAAA TAACATCAC CAA GTGATG-TA TCTAATATTATGATG TERM 1494 1303941 - 1303927 - g 89 -8.6 -4.49041 | opp_overlap 1303927 1303929, overlap 1303924 AAAAAATTAAAATAA CATCAC CAA GTGATG TATCTAATATTATGA TERM 1495 1303927 - 1303941 + G 71 -8.6 -3.02381 | opp_overlap 1303924 1303927, overlap 1303929 AAAAAATTAAAATAA CATCAC CAA GTGATG TATCTAATATTATGA SH1266 1303617 - 1304303 + | hypothetical protein SH1267 1304373 - 1304654 + | hypothetical protein SH1268 1304889 - 1304710 - | hypothetical protein TERM 1496 1305407 - 1305387 - g 71 -5.5 -4.53034 | opp_overlap 1305405 GGGATATAATGAAAA TTACATTGC TGG ACAACGTAA TGACGAATTCATTAT SH1269 1305058 - 1305534 + | hypothetical protein SH1270 1305615 - 1305737 + | hypothetical protein SH1271 1305934 - 1306770 + | hypothetical protein SH1272 1306770 - 1307279 + | hypothetical protein rplU 1307417 - 1307725 + | 50S ribosomal protein L21 SH1274 1307729 - 1308049 + | hypothetical protein TERM 1497 1308164 - 1308136 - g 81 -9.7 -3.35679 | overlap 1308142 1308157 GGTCGTGACTCAGAA TCAAAACGTTTAG GTG CTAAACGTGCTGA TGGTCAATACGTTAC TERM 1498 1308158 - 1308142 - g 93 -9.5 -4.50058 | overlap 1308136 1308157 GACTCAGAATCAAAA CGTTTAG GTG CTAAACG TGCTGATGGTCAATA rpmA 1308061 - 1308345 + | 50S ribosomal protein L27 TERM 1499 1308384 - 1308361 - f 88 -11.1 -3.05384 | opp_overlap 1308361, overlap 1308363 TTTTTGTCTAGTTAA CACCAGAAG TGAATG CTTCTGGTG TTTTATTTTGTTTTA TERM 1500 1308361 - 1308384 + F 100 -11.8 -5.40279 | opp_overlap 1308361 1308363 TTTTTGTCTAGTTAA CACCAGAAGT GAAT GCTTCTGGTG TTTTATTTTGTTTTA SH1276 1308373 - 1308483 + | hypothetical protein TERM 1501 1308775 - 1308762 - g 71 -6.7 -4.11692 | GATTTAGTGTTAAAA GTACC TCCT GGTAC AATAATCAAAAGTGT obgE 1308498 - 1309790 + | GTPase ObgE TERM 1502 1309895 - 1309881 - g 83 -5.8 -5.02231 | overlap 1309874 TAAAAACATTAAAAA TTAAAG ATG CTTTAA AAAATAATCCGGAAT SH1278 1309802 - 1310257 + | hypothetical protein ruvA 1310270 - 1310875 + | holliday junction DNA helicase ruvB 1310930 - 1311925 + | Holliday junction DNA helicase B queA 1311936 - 1312961 + | S-adenosylmethionine tRNA ribosyltransferase tgt 1312981 - 1314120 + | queuine tRNA-ribosyltransferase SH1283 1314136 - 1314396 + | hypothetical protein TERM 1503 1314424 - 1314465 + F 90 -11.1 -3.40967 | opp_overlap 1314430, overlap 1314430 ATGAAATTTATTTAT TTAAAACTGTCGACAAAGT TCAT ACTATGTTGACAGTTTTTA TATTATATGTATATG TERM 1504 1314430 - 1314459 + F 100 -10.1 -5.1764 | opp_overlap 1314430, overlap 1314424 TTTATTTATTTAAAA CTGTCGACAAAGT TCAT ACTATGTTGACAG TTTTTATATTATATG TERM 1505 1314459 - 1314430 - f 77 -7.9 -4.19817 | opp_overlap 1314430 1314424 TTTATTTATTTAAAA CTGTCGACAAAGT TCAT ACTATGTTGACAG TTTTTATATTATATG TERM 1506 1314736 - 1314713 - g 83 -6.9 -4.68424 | GAATGTAGTTAAAAA TGTAAATCT CGGACT AGATTTACA AGGTGGATTTGAAGT secDF 1314621 - 1316906 + | bifunctional preprotein translocase subunit SecD/SecF TERM 1507 1316916 - 1316945 + F 100 -14.5 -4.95758 | GTATAAATTATTAGG GAGTAGGACATTG CATT CAATGTTCTACTC TTTTTCTAGTATCAT SH1285 1317048 - 1319321 + | hypothetical protein apt 1319343 - 1319861 + | adenine phosphoribosyltransferase TERM 1508 1319913 - 1319958 + F 100 -8.7 -5.29385 | gap 2 ATGTCTAACAATTTT TGGGAATGAGATAATGAATTC GTAATG GGATTC-T-ATCTCATTCCCA TTTTTTCGTTAAATT TERM 1509 1320569 - 1320559 - g 74 -5.4 -4.82855 | TACTAAACTTAAAAA GGTA AAA TACC GCTCTAAAGAAGAAC relA 1320230 - 1322419 + | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) SH1288 1322435 - 1322887 + | D-tyrosyl-tRNA deacylase lytH 1322989 - 1323759 + | N-acetylmuramoyl-L-alanine amidase TERM 1510 1324038 - 1324071 + F 100 -14.1 -5.7946 | overlap 1324030 GCAACACGGCGATTC GTCCCTTGTATAGTA GAAA TGCTATATAAGGGAC TTTTTTTATTAAAGA TERM 1511 1324487 - 1324474 - g 70 -2.3 -5.33026 | overlap 1324475 GAACGTAAACAAAAA GGACG ATAC CGTCA ATTCACTCAATTCGG hisS 1324120 - 1325391 + | histidyl-tRNA synthetase aspS 1325409 - 1327175 + | aspartyl-tRNA synthetase TERM 1512 1327207 - 1327236 + F 91 -8 -5.00923 | opp_overlap 1327207 GATATAAATACATTA GTCATCGAAATC ACAATA GATTTTGGTGAC TTTTATTTAGTGTTT TERM 1513 1327598 - 1327622 + F 100 -10.8 -5.48623 | CACGGACTCTACCGG TACGCAAGGC TTTAT GTCTTGCGTA TTTTTATTTGTCTTT SH1292 1327686 - 1328462 + | hypothetical protein SH1293 1329793 - 1328525 - | recombination factor protein RarA SH1294 1329879 - 1330301 + | hypothetical protein SH1295 1330443 - 1330577 + | hypothetical protein TERM 1514 1330590 - 1330612 + T 95 -7.8 -5.4251 | overlap 1330592 TAATTAAATTTTTGA GGGATAACAT TTG ATGTTATCGC TTTTTTATGTGTAAA TERM 1515 1330592 - 1330610 + T 74 -9 -2.89568 | overlap 1330590 ATTAAATTTTTGAGG GATAACAT TTG ATGTTATC GCTTTTTTATGTGTA TERM 1516 1330746 - 1330719 - T 89 -7.8 -5.02357 | TATAAGCAAATAAAA GGAGTGAGAT TAAATAAT ATCCCACTCC AAATTATACCTTAAT SH1296 1331812 - 1330799 - | hypothetical protein SH1297 1332093 - 1333232 + | hypothetical protein SH1298 1333235 - 1334347 + | tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase SH1299 1334546 - 1335220 + | hypothetical protein SH1300 1335222 - 1337660 + | hypothetical protein TERM 1517 1337886 - 1337913 + F 100 -4.9 -6.20267 | opp_overlap 1337886 GTGGTACCGCGAAAA CGTTCGTCC CTTTTTTTGA GGATGAACG TTTTTTTGTTTTTAG TERM 1518 1340115 - 1340101 - g 70 -4.4 -4.70515 | GATATTCAAAATAAA TTTAAT TCT ATTAAA GATCAAGTTAAAGTT alaS 1337959 - 1340589 + | alanyl-tRNA synthetase SH1302 1340656 - 1340916 + | hypothetical protein SH1303 1340920 - 1341348 + | hypothetical protein SH1304 1341363 - 1341677 + | hypothetical protein SH1305 1342077 - 1342712 + | hypothetical protein SH1306 1342715 - 1343638 + | hypothetical protein TERM 1519 1343972 - 1343960 - g 74 -3.3 -5.37345 | TTGAATTAGAAAAAA CGGGT GCT ACCGG AATCATTGTTGCAGA SH1307 1343656 - 1344924 + | hypothetical protein udk 1344924 - 1345547 + | uridine kinase greA 1345623 - 1346099 + | transcription elongation factor TERM 1520 1346179 - 1346216 + F 100 -14.5 -5.52986 | opp_overlap 1346187 TGCATATTTATATCG GCTATGAAGAAATCA AGTAACAA TGATTTCTTCATAGC TTTTTTTAATAACCT TERM 1521 1346519 - 1346532 + F 74 -2.5 -5.65177 | opp_overlap 1346519 TAAACAACTAAGATA TTATA ATGT TATAA TTTTTTTATACATAT SH1310 1346635 - 1347363 + | hypothetical protein SH1311 1347353 - 1348357 + | hypothetical protein SH1312 1348361 - 1348810 + | hypothetical protein TERM 1522 1349054 - 1349070 + G 72 -5.1 -4.83169 | CAGGTGCGAATGCGA TCCATCC AGG GTATGGA TTTTTATCAGAAAGT SH1313 1348825 - 1350186 + | hypothetical protein SH1314 1350186 - 1350938 + | hypothetical protein TERM 1523 1351446 - 1351426 - g 72 -2.6 -5.28826 | opp_overlap 1351426 AAAGTGGACAAAAAA TCATGGAT GTTGT ATCGATGA TTTTAGGTGTTGTTA SH1315 1350951 - 1352207 + | hypothetical protein TERM 1524 1352255 - 1352287 + F 80 -5.7 -5.07107 | opp_overlap 1352271 TATATAATTCTTTAA GGCTGTTTCTATTAA ATT TCAATAGAAATGGTC TTTTTTACAAGTTTA pfs 1352472 - 1353137 + | 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase SH1317 1353161 - 1353688 + | hypothetical protein TERM 1525 1353755 - 1353776 + G 100 -10.3 -4.57073 | overlap 1353775 GATAAAAGTGCACCT GGTTATGTT CCTG AACATAACC TTTTTAGAGAGGATG SH1318 1353689 - 1354789 + | GTP-binding protein YqeH aroE 1354802 - 1355608 + | shikimate dehydrogenease SH1320 1355610 - 1355900 + | hypothetical protein SH1321 1355901 - 1356479 + | hypothetical protein TERM 1526 1356795 - 1356772 - g 70 -8.2 -3.2819 | ATTGAAGACGAGGAA GTGCTTCTTG CAAT CAAGAATCAC ACAACTGGTCGAAAA SH1322 1356469 - 1357053 + | hypothetical protein TERM 1527 1357099 - 1357079 - g 73 -8.3 -3.52396 | overlap 1357077 AAGAATTATTAAATA TTGCTGTCG ATG CGACAGAAA ACAAAAAAGCAGAAG SH1323 1357054 - 1357407 + | hypothetical protein SH1324 1357408 - 1358133 + | hypothetical protein TERM 1528 1358186 - 1358139 - f 77 -6.4 -4.78326 | opp_overlap 1358144, overlap 1358144 TTTTAAATAAATAAA GTAAACTCATCTCCTTGAACGT TTAT ACATATAAGGAGATGAGTTTTT TGTTTAAAGATAAAA TERM 1529 1358144 - 1358181 + F 100 -10.7 -5.63517 | opp_overlap 1358144 1358139 AATAAATAAAGTAAA CTCATCTCCTTGAACGT TTAT ACATATAAGGAGATGAG TTTTTTGTTTAAAGA TERM 1530 1358181 - 1358144 - f 95 -10.7 -4.30977 | opp_overlap 1358144, overlap 1358139 AATAAATAAAGTAAA CTCATCTCCTTGAACGT TTAT ACATATAAGGAGATGAG TTTTTTGTTTAAAGA SH1325 1358186 - 1358890 + | hypothetical protein comEB 1358961 - 1359419 + | late competence operon required for DNA binding and uptake TERM 1531 1360322 - 1360332 + G 71 -5.4 -4.63479 | opp_overlap 1360322 ATTATCTATATGATA TTGG TTT CCAA TTTTCATTTATAATC TERM 1532 1361139 - 1361129 - g 72 -2.6 -5.2204 | opp_overlap 1361129 TAGAATTAATAAAAA TAAA ACG TTTA TTTAAGATCAATAAT TERM 1533 1361373 - 1361348 - g 76 -6.4 -4.5528 | opp_overlap 1361352 CAAAATTAATGAAAA TATATCAATT ACCAAA AATTGATATA CTGAAAGTTGGTCAT SH1327 1359424 - 1361604 + | hypothetical protein holA 1361680 - 1362654 + | DNA polymerase III subunit delta TERM 1534 1362764 - 1362805 + F 95 -11.1 -4.44448 | opp_overlap 1362765 1362767, overlap 1362767 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 1535 1362804 - 1362765 - f 100 -12.4 -4.07562 | opp_overlap 1362764 1362767, overlap 1362767 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 1536 1362802 - 1362767 - f 100 -15 -3.62348 | opp_overlap 1362764 1362767, overlap 1362765 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1537 1362767 - 1362802 + F 100 -17.2 -4.33281 | opp_overlap 1362767 1362765, overlap 1362764 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH1329 1362775 - 1362924 + | hypothetical protein TERM 1538 1363140 - 1363124 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 1539 1363894 - 1363908 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 1540 1364604 - 1364636 + G 93 -8 -5.55698 | opp_overlap 1364604 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 1541 1364636 - 1364604 - g 90 -8 -5.35222 | opp_overlap 1364604 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 1363008 - 1364678 + | IS1272 transposase rpsT 1364934 - 1364683 - | 30S ribosomal protein S20 lepA 1365271 - 1367094 + | GTP-binding protein LepA hemN 1367227 - 1368348 + | coproporphyrinogen III oxidase hrcA 1368450 - 1369427 + | heat-inducible transcriptional repressor TERM 1542 1369987 - 1370003 + G 73 -9.5 -2.77523 | opp_overlap 1369986 1369987 GTTCAAGATGATAAT CCAGATT TCA AATCTGG TGATATTACTCAAGA TERM 1543 1370003 - 1369987 - g 72 -9.5 -2.70923 | opp_overlap 1369987, overlap 1369986 GTTCAAGATGATAAT CCAGATT TCA AATCTGG TGATATTACTCAAGA grpE 1369459 - 1370085 + | GrpE protein dnaK 1370136 - 1371971 + | DnaK protein TERM 1544 1372032 - 1372060 + F 100 -11.2 -5.54907 | opp_overlap 1372032 AATGTAAGCCAAAAA GTCAAAGTCAAT TGAAC ATTGGCTTTGAC TTTTTCTTTTATAAC TERM 1545 1372060 - 1372032 - f 93 -9 -4.75776 | opp_overlap 1372032 AATGTAAGCCAAAAA GTCAAAGTCAAT TGAAC ATTGGCTTTGAC TTTTTCTTTTATAAC TERM 1546 1372229 - 1372217 - g 86 -4.9 -5.5943 | AAATTATCAAAAAAA TATCA CCC TGATA TCAATAAAGAAGAGG TERM 1547 1372332 - 1372318 - g 73 -8.6 -3.16667 | overlap 1372311 1372315 TAAAAAAGCAAATTA TGACCA ATT TGGTCA CGACGGACCTCAAGG dnaJ 1372118 - 1373242 + | DnaJ protein SH1338 1373247 - 1374185 + | hypothetical protein TERM 1548 1374213 - 1374230 + G 93 -7.7 -5.60993 | opp_overlap 1374213 CTTTATCGATCAAAA CGCTGAT GAAA GTCAGCG TTTTTTTATAACAAA TERM 1549 1374230 - 1374213 - g 78 -7 -4.2828 | opp_overlap 1374213 CTTTATCGATCAAAA CGCTGA TGAAAG TCAGCG TTTTTTTATAACAAA SH1339 1374187 - 1374939 + | hypothetical protein SH1340 1374945 - 1376291 + | hypothetical protein rpsU 1376421 - 1376597 + | 30S ribosomal protein S21 TERM 1550 1376674 - 1376644 - f 91 -11.2 -3.06361 | opp_overlap 1376645, overlap 1376631 TATTAATTATATATA TGCTCTCGATTAGT TAA ACTAGTCGAGAGCT TTTTTATGTTAAAGA TERM 1551 1376645 - 1376673 + F 100 -16.9 -5.47159 | opp_overlap 1376644 1376631 ATTAATTATATATAT GCTCTCGATTAGT TAA ACTAGTCGAGAGC TTTTTTATGTTAAAG SH1342 1376755 - 1377465 + | hypothetical protein SH1343 1377478 - 1378464 + | hypothetical protein TERM 1552 1378608 - 1378596 - g 76 -4.1 -5.08824 | CCCTCATCCAAAAAA GTCAA CTT CTGAC AAAAAAGAAACTCAT SH1344 1378483 - 1379172 + | hypothetical protein TERM 1553 1379213 - 1379248 + F 95 -8.4 -4.99947 | opp_overlap 1379216 ATTAAAGATTATATT TAACCCGAATTTCATT TTTA AATGATTTTCGGGTTG TTTTATTTAATTAAA phoH 1379485 - 1380432 + | hypothetical protein SH1346 1380433 - 1380894 + | hypothetical protein SH1347 1381016 - 1381234 + | hypothetical protein cdd 1381254 - 1381658 + | cytidine deaminase era 1381659 - 1382558 + | GTP-binding protein Era TERM 1554 1382732 - 1382757 + G 78 -6.9 -4.39652 | opp_overlap 1382731 1382732, overlap 1382728 1382733 AAACAGGTTTACAAG CCCATACGCAA CTAT TTGTGTATGGC TTATTTATTTATAAT TERM 1555 1382733 - 1382756 + G 83 -10.4 -3.22164 | opp_overlap 1382731 1382732, overlap 1382732 1382728 AACAGGTTTACAAGC CCATACGCAA CTAT TTGTGTATGG CTTATTTATTTATAA SH1350 1382590 - 1383342 + | hypothetical protein TERM 1556 1383395 - 1383368 - T 100 -14.2 -4.24204 | opp_overlap 1383368 TACTCACACTTAAAA CCCCACCACAAA GAAA TTTGAGGTGGGG TTAGTACTAATTATT TERM 1557 1383368 - 1383395 + T 100 -14.2 -3.2613 | opp_overlap 1383368 TACTCACACTTAAAA CCCCACCACAAA GAAA TTTGAGGTGGGG TTAGTACTAATTATT glyS 1384811 - 1383420 - | glycyl-tRNA synthetase TERM 1558 1383831 - 1383843 + g 80 -6.3 -4.72863 | opp_overlap 1383831, overlap 1383821 AGATGGTTCAATACA GTATG GAA CATAC TTTTCGTTTGTTTCA TERM 1559 1384204 - 1384232 + g 79 -5.5 -5.03314 | gap 1, opp_overlap 1384211 TCATTACGGAATGAC TTACCAATTTGG CCAATA CCAAAT-GGTAA TTTTTTACGCATAGA TERM 1560 1384894 - 1384841 - H 100 -15.8 -5.10064 | gap 1, opp_overlap 1384840 1384858 1384882 1384886 TTTAATACATAAAAA CGCCCCAAGACAATAAATAAATGTA TTAAT TACATTTAT-CATTATCTTGGGACG AGTTAATTTATTATA SH1352 1385282 - 1385773 + | hypothetical protein SH1353 1385785 - 1386600 + | hypothetical protein dnaG 1386660 - 1388465 + | DNA primase TERM 1561 1388530 - 1388558 + F 100 -13.5 -2.83903 | opp_overlap 1388513 1388533 1388536, overlap 1388526 1388533 1388536 AATAGTATTTCTATT TAATAACCATTAT TGT ATAATGGTTATTA TGCGTTTTTAACGGG TERM 1562 1388555 - 1388533 - f 88 -10.8 -3.06302 | opp_overlap 1388530 1388526 1388533 1388536, overlap 1388536 AGTATTTCTATTTAA TAACCATTAT TGT ATAATGGTTA TTATGCGTTTTTAAC TERM 1563 1388533 - 1388555 + F 90 -10.8 -3.5616 | opp_overlap 1388533 1388536, overlap 1388530 1388526 1388536 AGTATTTCTATTTAA TAACCATTAT TGT ATAATGGTTA TTATGCGTTTTTAAC TERM 1564 1388552 - 1388536 - f 74 -8.1 -3.67775 | opp_overlap 1388533 1388530 1388526 1388536, overlap 1388533 ATTTCTATTTAATAA CCATTAT TGT ATAATGG TTATTATGCGTTTTT TERM 1565 1388536 - 1388552 + F 78 -8.1 -3.89505 | opp_overlap 1388536 1388533, overlap 1388533 1388530 1388526 ATTTCTATTTAATAA CCATTAT TGT ATAATGG TTATTATGCGTTTTT sigA 1388766 - 1389872 + | RNA polymerase sigma factor RpoD SH1356 1390061 - 1390750 + | hypothetical protein SH1357 1390740 - 1391840 + | hypothetical protein SH1358 1391888 - 1393234 + | hypothetical protein TERM 1566 1393914 - 1393900 - g 95 -8.6 -4.84274 | TAATGATAGTAAAAA TGAGCA AGG TGCTCA TAAAGATAGACATGA SH1359 1393244 - 1394134 + | endonuclease IV TERM 1567 1394438 - 1394412 - g 70 -2.4 -5.26875 | overlap 1394414 TTTTGAATTAAAAAA TATCGATTATCA ATT TGATAATAAACA AGTTTTAGAAAATAT mreA 1394383 - 1395159 + | hypothetical protein TERM 1568 1395544 - 1395558 + G 82 -4.2 -5.4659 | overlap 1395546 TTATGAGCGCAGGGA TTGCAC TAA GTGCCA TTTTTATTTCTCTTG mreB 1395213 - 1396067 + | hypothetical protein SH1362 1396071 - 1396493 + | ferric uptake regulator-like protein TERM 1569 1396598 - 1396627 + F 78 -4.4 -5.47821 | opp_overlap 1396598, overlap 1396623 TATTAGCAATCTAAA CTGAGAAAGT GTTAATTGTA GCTTTCTCAG TTTTTTTGAGTCAGT sodA 1397018 - 1397548 + | superoxide dismutase TERM 1570 1397571 - 1397591 + F 100 -11.9 -5.80364 | opp_overlap 1397570 TCTCCTATTTAACAT GTGGTCTCT ATA AGAGGCCAC TTTTTTTATTAAAAT TERM 1571 1398031 - 1398000 - g 86 -6 -5.45726 | GATACTGCAAAAAAA TTGTCATCTCTCAT TACT ATGAAAACTGACAA AATTACTGAAAGAGA TERM 1572 1398269 - 1398238 - g 80 -9.5 -3.58269 | CAATTTATCGTGAAA TGTCTGCTGGTTC TACCAT GAACCCGCAAACA ATTAAGAATGAGGAT pbp3 1397676 - 1399721 + | penicillin-binding protein 3 rpmG 1399838 - 1399987 + | 50S ribosomal protein L33 TERM 1573 1400107 - 1400147 + F 100 -9.2 -5.99154 | gap 2, opp_overlap 1400119 1400123, overlap 1400120 CAAGTCATCCTTACA GGGGCAAGACTATGAATCCA TAA TGGATTC-T-GTCTAGCTCC TTTTTTTATTTCATC TERM 1574 1400120 - 1400136 + F 77 -9.5 -2.94551 | opp_overlap 1400119 1400123, overlap 1400107 CAGGGGCAAGACTAT GAATCCA TAA TGGATTC TGTCTAGCTCCTTTT TERM 1575 1400403 - 1400415 + G 71 -7.7 -3.56273 | AGATACTTATCCCAT CATCG AAA CGATG TTATCTGATGGTAAG SH1366 1400224 - 1400760 + | hypothetical protein SH1367 1400776 - 1402233 + | hypothetical protein SH1368 1402217 - 1402420 + | hypothetical protein TERM 1576 1403001 - 1403037 + G 71 -7.6 -3.68827 | gap 1, opp_overlap 1403032 TTCAGCTACTGGTGT CGTTAA-TTTGGTTAAT TTTT ATTATCCAAAATTAACG TTTAAATCATCAATA TERM 1577 1403157 - 1403146 - g 77 -5.8 -4.68593 | opp_overlap 1403145 TTTATTACTGAAAAA GTGG CAAA CCAC ATCGCTTATTTATGT glcK 1402417 - 1403403 + | glucokinase TERM 1578 1403525 - 1403515 - g 73 -4 -5.03201 | opp_overlap 1403515 AACAAGAAGGAAAAA TTGA TTA TCAA TTAACTCCAATGAAT SH1370 1403403 - 1403726 + | hypothetical protein SH1371 1403728 - 1404354 + | hypothetical protein TERM 1579 1404371 - 1404400 + F 100 -9.4 -5.42862 | opp_overlap 1404361 ATAAAGTAAATTCTT CACCTCTTACGT TTATAT ATGTAGGAGGTG TTTTTTTGAAACTAT SH1372 1404406 - 1405380 + | hypothetical protein SH1373 1405352 - 1406416 + | hypothetical protein comGC 1406430 - 1406750 + | exogenous DNA-binding protein comGC SH1375 1406728 - 1407183 + | hypothetical protein SH1376 1407164 - 1407463 + | hypothetical protein SH1377 1407381 - 1407872 + | hypothetical protein SH1378 1408032 - 1408550 + | hypothetical protein TERM 1580 1408572 - 1408599 + F 72 -5 -4.82901 | opp_overlap 1408573 1408575, overlap 1408573 1408575 TTAGAGAGAATAAAA ATATTGTACTTA AATT TAAGTACAATGA TTTTTATCGCCGAAG TERM 1581 1408598 - 1408573 - f 86 -6.3 -5.27206 | opp_overlap 1408572 1408573 1408575, overlap 1408575 TAGAGAGAATAAAAA TATTGTACTTA AATT TAAGTACAATG ATTTTTATCGCCGAA TERM 1582 1408573 - 1408598 + F 75 -8.5 -3.49419 | opp_overlap 1408573 1408575, overlap 1408572 1408575 TAGAGAGAATAAAAA TATTGTACTTA AATT TAAGTACAATG ATTTTTATCGCCGAA TERM 1583 1408575 - 1408596 + F 78 -8.9 -3.31915 | opp_overlap 1408573 1408575, overlap 1408573 1408572 GAGAGAATAAAAATA TTGTACTTA AATT TAAGTACAA TGATTTTTATCGCCG TERM 1584 1408596 - 1408575 - f 86 -8.9 -4.24787 | opp_overlap 1408575 1408573 1408572, overlap 1408573 GAGAGAATAAAAATA TTGTACTTA AATT TAAGTACAA TGATTTTTATCGCCG TERM 1585 1408686 - 1408708 + F 100 -9.9 -5.25803 | opp_overlap 1408686 GATTAAGTGTATAAA CAGGGTAGC TATTT GCTACTCTG TTTTTTATAAAAATT TERM 1586 1408708 - 1408686 - f 75 -7.7 -3.93236 | opp_overlap 1408686 GATTAAGTGTATAAA CAGGGTAGC TATTT GCTACTCTG TTTTTTATAAAAATT SH1379 1408739 - 1409830 + | glycine cleavage system aminomethyltransferase T SH1380 1409847 - 1411199 + | glycine dehydrogenase subunit 1 SH1381 1411186 - 1412664 + | glycine dehydrogenase subunit 2 TERM 1587 1412711 - 1412673 - T 71 -8.2 -3.21556 | opp_overlap 1412676 1412702, overlap 1412672 1412674 AGAATAATTTAAAAC TTTGACCCTGTAACCAAT TTA ATTGATTACAGGGTCTTC CCTATTTTAAACTTA TERM 1588 1412710 - 1412674 - T 93 -11.7 -2.51849 | opp_overlap 1412676 1412702, overlap 1412673 1412672 GAATAATTTAAAACT TTGACCCTGTAACCAAT TTA ATTGATTACAGGGTCTT CCCTATTTTAAACTT TERM 1589 1412676 - 1412708 + T 100 -16.5 -3.28785 | opp_overlap 1412674 1412673 1412672, overlap 1412702 ATAATTTAAAACTTT GACCCTGTAACCAAT TTA ATTGATTACAGGGTC TTCCCTATTTTAAAC TERM 1590 1412820 - 1412798 - T 100 -12.2 -5.4148 | opp_overlap 1412798 TAAATAATTAAAAAA CTCTTAAAGA ACA TCTTTAAGAG TTAGTAAGCAGACAA TERM 1591 1412798 - 1412820 + T 95 -12.2 -3.14132 | opp_overlap 1412798 TAAATAATTAAAAAA CTCTTAAAGA ACA TCTTTAAGAG TTAGTAAGCAGACAA SH1382 1413226 - 1412840 - | hypothetical protein SH1383 1413378 - 1414208 + | hypothetical protein TERM 1592 1414213 - 1414245 + T 100 -15.1 -6.37666 | opp_overlap 1414213 ATAAAAAATAAAAAA TCATAGGATGGCTAA TAT TTGGTCATCCTATGA TTTTTTTTATTTTCT TERM 1593 1414245 - 1414213 - T 100 -10.7 -6.07374 | opp_overlap 1414213 ATAAAAAATAAAAAA TCATAGGATGGCTAA TAT TTGGTCATCCTATGA TTTTTTTTATTTTCT SH1384 1414467 - 1414252 - | hypothetical protein SH1385 1415063 - 1414482 - | hypothetical protein TERM 1594 1414854 - 1414866 + g 95 -4.9 -6.15717 | opp_overlap 1414854 TTTATTATTATCAAC TGTTT TGG AAACA TTTTTTTTATCTTTA SH1386 1415167 - 1416225 + | Xaa-Pro dipeptidase efp 1416253 - 1416810 + | elongation factor P TERM 1595 1416826 - 1416852 + F 100 -11.8 -5.60864 | opp_overlap 1416826 TTAACAGTAGCTAAA GTCTTTCTAATT ACT AATTGGAAAGAC TTTTTTTAATATCTA TERM 1596 1416852 - 1416826 - f 86 -9.6 -3.71607 | opp_overlap 1416826 TTAACAGTAGCTAAA GTCTTTCTAATT ACT AATTGGAAAGAC TTTTTTTAATATCTA accB 1417027 - 1417512 + | acetyl-CoA carboxylase biotin carboxyl carrier subunit TERM 1597 1418070 - 1418080 + G 74 -6.8 -4.30576 | opp_overlap 1418070 ATGACTCAACAAGAA GCAG AAA CTGC TTTTGGTAATGGCGG accC 1417512 - 1418867 + | acetyl-CoA carboxylase biotin carboxylase subunit SH1390 1418881 - 1419240 + | hypothetical protein nusB 1419272 - 1419658 + | transcription antitermination protein NusB xseA 1419677 - 1421014 + | exodeoxyribonuclease VII large subunit SH1393 1421007 - 1421237 + | hypothetical protein ispA 1421215 - 1422096 + | geranyl-trans-transferase TERM 1598 1422419 - 1422405 - g 76 -2.8 -5.48303 | overlap 1422407 ATAATGGCAAAAAAA TCTGTG AGA CACATA AAGATTAGAGAAATT ahrC 1422393 - 1422845 + | arginine repressor TERM 1599 1422902 - 1422916 + G 74 -5.8 -4.63184 | ATTTGCAATTATTGA TGAATT AGA AATTCA TTTTTCAGATGGATT recN 1422861 - 1424546 + | DNA repair protein TERM 1600 1424593 - 1424560 - f 70 -8.6 -2.55392 | opp_overlap 1424558 1424567, overlap 1424564 1424567 AATTCATTGAATTTA TTAATAATTATTTT TGCTGT AAAATAATTATTAA CATTATAAAATGAAT SH1397 1424723 - 1426147 + | dihydrolipoamide dehydrogenase TERM 1601 1426367 - 1426351 - g 73 -7.3 -4.00756 | opp_overlap 1426350 1426351 1426363 TACGCTATGAAAGAA GGAGATA TTT CATCTCC ATATTATAGAGATTT bfmBAA 1426165 - 1427166 + | branched-chain alpha-keto acid dehydrogenase E1 bfmBAB 1427159 - 1428142 + | branched-chain alpha-keto acid dehydrogenase E1 TERM 1602 1428526 - 1428508 - g 83 -6.1 -5.03715 | ATCAGCTTCAAAAAA TACTTCT GATAA AGAAGTA AGTCATTCTGTTAAA TERM 1603 1428946 - 1428928 - g 88 -7.5 -4.95806 | opp_overlap 1428927 1428944, overlap 1428944 AAATCATCATAAAAA TTCGTTC AAAGA GAACGAA GGTTATAATTTAACT bmfBB 1428155 - 1429483 + | branched-chain alpha-keto acid dehydrogenase E2 SH1401 1429586 - 1430023 + | hypothetical protein SH1402 1430036 - 1431013 + | hypothetical protein TERM 1604 1431058 - 1431099 + F 95 -11.1 -4.44448 | opp_overlap 1431059 1431061, overlap 1431061 ATAATTCCTAGCAAA ATAGCCAGTAAATGAGTTT TTAT AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 1605 1431098 - 1431059 - f 100 -12.4 -4.2679 | opp_overlap 1431058 1431061, overlap 1431061 TAATTCCTAGCAAAA TAGCCAGTAAATGAGTTT TTAT AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 1606 1431096 - 1431061 - f 100 -15 -3.7331 | opp_overlap 1431058 1431061, overlap 1431059 ATTCCTAGCAAAATA GCCAGTAAATGAGTTT TTAT AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1607 1431061 - 1431096 + F 100 -17.2 -4.33281 | opp_overlap 1431061 1431059, overlap 1431058 ATTCCTAGCAAAATA GCCAGTAAATGAGTTT TTAT AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1608 1431462 - 1431452 - g 70 -4 -4.89477 | GTCCGAACAATAAAA GAAT AGG ATTC AAAAGATATGCCTAT TERM 1609 1431829 - 1431815 - g 75 -10 -2.57028 | opp_overlap 1431812, overlap 1431814 1431812 CTATAAGAAAAGTAG CAGCTC AAC GAGCTG AAATTAATCAAAAAC TERM 1610 1431856 - 1431888 + G 84 -8 -4.59982 | opp_overlap 1431849 1431856, overlap 1431849 AAACATTATAAAAAA GACAATTTCTAT ATAATTCCA ATAGAAATTGTC TTTATTTACTTATCC TERM 1611 1431888 - 1431856 - g 90 -8 -5.38321 | opp_overlap 1431856 1431849, overlap 1431849 AAACATTATAAAAAA GACAATTTCTAT ATAATTCCA ATAGAAATTGTC TTTATTTACTTATCC tnp 1431301 - 1431921 + | IS1272 transposase SH1404 1432037 - 1431942 - | hypothetical protein SH1405 1432196 - 1433323 + | hypothetical protein TERM 1612 1433896 - 1433886 - g 71 -5.4 -4.54727 | GCTGCTAAAGCAAAA GATG GTG CATC ATGTGTAGAATATAT gnd 1433397 - 1434803 + | 6-phosphogluconate dehydrogenase TERM 1613 1434820 - 1434847 + F 100 -11.5 -5.03145 | opp_overlap 1434823 CGCATACTAGTTACA GAAGTAAACCA ATTCAA TGGTTTACTTC TTTTTTAAAAAATTA SH1407 1435088 - 1435975 + | hypothetical protein TERM 1614 1437099 - 1437087 - g 74 -6.3 -4.40132 | opp_overlap 1437087 ATCAAGGACAAGAAA TTGGT ATG ACCAA TTATCCTTTTGAAAG malA 1435988 - 1437634 + | alpha-D-1,4-glucosidase TERM 1615 1437647 - 1437673 + F 70 -8.1 -3.02518 | opp_overlap 1437647, overlap 1437646 1437644 TAATTTATAAGCAAA GTTAGGACATA CTATT TTTGTCCTAAC CTCTTTTTCATTGGA TERM 1616 1437673 - 1437647 - f 78 -8.1 -4.01939 | opp_overlap 1437646 1437644 1437647 TAATTTATAAGCAAA GTTAGGACATA CTATT TTTGTCCTAAC CTCTTTTTCATTGGA SH1409 1437808 - 1437903 + | hypothetical protein TERM 1617 1437929 - 1437956 + T 100 -14.3 -3.18582 | opp_overlap 1437929 AGCCACACCAAAAAA TCCCCTCACTA CTGGCA TAGTGAGGGGA TTGGTGCATAAAATG TERM 1618 1437956 - 1437929 - T 100 -15 -5.22312 | opp_overlap 1437929 AGCCACACCAAAAAA TCCCCTCACTAC TGGC ATAGTGAGGGGA TTGGTGCATAAAATG SH1410 1438928 - 1438065 - | hypothetical protein TERM 1619 1438782 - 1438798 + g 81 -8.1 -4.24294 | opp_overlap 1438796, overlap 1438796 TGCGTACTGTTCAGG TGATTGT CCA ACAATCA TTTTAAATGATTGAT TERM 1620 1439077 - 1439033 - R 82 -5.2 -5.4505 | gap 2, opp_overlap 1439046, overlap 1439034 TTTTTTAATAAAAAA GGGTGGTAGGAC-A-GAATTTA AAA TCAATTCATTGTCCCACCACCA TAAGAATGAATATAG TERM 1621 1439076 - 1439034 - R 78 -8.7 -3.86307 | gap 2, opp_overlap 1439046, overlap 1439033 TTTTTAATAAAAAAG GGTGGTAGGAC-A-GAATTTA AAA TCAATTCATTGTCCCACCACC ATAAGAATGAATATA SH1411 1440694 - 1439210 - | glucose-6-phosphate 1-dehydrogenase SH1412 1440930 - 1441850 + | hypothetical protein TERM 1622 1441905 - 1441949 + T 76 -7.2 -4.28432 | opp_overlap 1441905 AAAATTACAAAGTAA GAGACTAGGATTTAGAATTC ACATA GAAATCATTATCCTAGTCTC TTTTACATTAAAATT SH1413 1442779 - 1441964 - | hypothetical protein TERM 1623 1442270 - 1442252 - G 71 -3.1 -5.02502 | opp_overlap 1442266, overlap 1442254 GACATGATATAAAAA TGCAGGA CCGCT TCCTGTA ATCGCAGTTACTTGA TERM 1624 1442861 - 1442830 - H 76 -8.2 -3.71793 | gap 1, opp_overlap 1442839 CATAGTAACATATAA GTAGCACT-TCTTTT TAT AAAAGTTAGTGCTAC TATACGCATGAGCTT TERM 1625 1443181 - 1443171 - g 79 -5.4 -5.0916 | opp_overlap 1443171 TTTGCAAGATAAAAA TGCT ATT AGCA TGTTACCACAATATA SH1414 1442983 - 1443738 + | hypothetical protein SH1415 1443753 - 1443995 + | hypothetical protein SH1416 1445003 - 1444095 - | hypothetical protein SH1417 1445085 - 1445627 + | ADP-ribose pyrophosphatase SH1418 1445732 - 1446178 + | hypothetical protein TERM 1626 1446190 - 1446221 + F 70 -6 -4.28713 | ATAGATTAACTAATA GGCTAGGACAAT TTTAAATC ATTGTCTTAGTC TTTCTTAATACTATT xerD 1446278 - 1447165 + | site-specific recombinase SH1420 1447789 - 1447268 - | hypothetical protein SH1421 1447883 - 1448614 + | hypothetical protein SH1422 1448607 - 1449146 + | hypothetical protein rluB 1449143 - 1449880 + | ribosomal large subunit pseudouridine synthase B TERM 1627 1449899 - 1449936 + F 100 -16 -5.40474 | opp_overlap 1449899 1449905 AAGTATATTTTACAA TAGCAAGAGAAATTAA ATGATA TTAATTTCTCTTGCTA TTTTTTTCACAAAGT TERM 1628 1449936 - 1449899 - f 100 -16 -3.35706 | opp_overlap 1449899, overlap 1449905 AAGTATATTTTACAA TAGCAAGAGAAATTAA ATGATA TTAATTTCTCTTGCTA TTTTTTTCACAAAGT TERM 1629 1449930 - 1449905 - f 70 -7.8 -3.42013 | opp_overlap 1449899, overlap 1449899 ATTTTACAATAGCAA GAGAAATTAA ATGATA TTAATTTCTC TTGCTATTTTTTTCA srrA 1450032 - 1450757 + | staphylococcal respiratory response protein TERM 1630 1450765 - 1450810 + G 77 -5.8 -4.67982 | gap 1, opp_overlap 1450771, overlap 1450766 1450771 CTAAATAGTGTGGTA ATAAAACTGTGGTTAACTATA CTTTT TATAGT-AACGACAGTTTTAA TTTTATTAAGTGCGG TERM 1631 1450766 - 1450809 + G 79 -9.3 -3.40307 | gap 1, opp_overlap 1450771, overlap 1450765 1450771 TAAATAGTGTGGTAA TAAAACTGTGGTTAACTATA CTTTT TATAGT-AACGACAGTTTTA ATTTTATTAAGTGCG TERM 1632 1450771 - 1450804 + G 72 -4.8 -4.78029 | gap 1, opp_overlap 1450771, overlap 1450766 1450765 AGTGTGGTAATAAAA CTGTGGTTAACTATA CTTTT TATAGT-AACGACAG TTTTAATTTTATTAA srrB 1450738 - 1452495 + | staphylococcal respiratory response protein SrrB SH1426 1452787 - 1452686 - | hypothetical protein SH1427 1452835 - 1453377 + | hypothetical protein TERM 1633 1453418 - 1453382 - T 100 -17.6 -5.32882 | opp_overlap 1453382 TATTATCATAAAAAA CCTCCTAATGTTGAAC TTATT ATTCAACATTAGGAGG TTTCATTATTGATTC TERM 1634 1453382 - 1453418 + T 100 -16.9 -4.11412 | opp_overlap 1453382 TATTATCATAAAAAA CCTCCTAATGTTGAA CTTATTA TTCAACATTAGGAGG TTTCATTATTGATTC fer 1453697 - 1453449 - | ferredoxin SH1429 1453807 - 1454760 + | hypothetical protein SH1430 1454753 - 1456132 + | hypothetical protein TERM 1635 1456686 - 1456650 - g 77 -8.8 -3.69976 | AAAAGACTTTAATAA TGATGCTTCACGTAGA AATAA TCGTCATGAAGCATCA AATAGAAAACATGAT TERM 1636 1457090 - 1457077 - g 70 -2.3 -5.25805 | AATAAAGGTAAAAAA GCAGC AGTT GGTGC AGGTGCAGCTGGTGC ebpS 1456282 - 1457901 + | cell surface elastin binding protein EbpS TERM 1637 1457915 - 1457952 + F 100 -21.7 -3.65529 | opp_overlap 1457920, overlap 1457920 AACTTAGTTATCATT CAAAAGAGACTGAAACA AAAT TGTTTCAGTCTCTTTTG TTTCAATGCACATAT TERM 1638 1457947 - 1457920 - f 100 -15.8 -4.21462 | opp_overlap 1457915 1457920 AGTTATCATTCAAAA GAGACTGAAACA AAAT TGTTTCAGTCTC TTTTGTTTCAATGCA TERM 1639 1457920 - 1457947 + F 100 -15.8 -4.90778 | opp_overlap 1457920, overlap 1457915 AGTTATCATTCAAAA GAGACTGAAACA AAAT TGTTTCAGTCTC TTTTGTTTCAATGCA SH1432 1458063 - 1459049 + | hypothetical protein TERM 1640 1459078 - 1459127 + T 100 -13.9 -2.83271 | gap 1, opp_overlap 1459081 1459084, overlap 1459084 AAACAGCGGTATAGT TAATAAGAGCTGAGAACGACGCAA CAT TAGTGTC-TTCTCAGCTCTTATCA TCCTTATGAAGATAA TERM 1641 1459124 - 1459081 - T 100 -13.4 -3.12668 | gap 1, opp_overlap 1459078 1459084, overlap 1459084 CAGCGGTATAGTTAA TAAGAGCTGAGAACGACGCAA CAT TAGTGTC-TTCTCAGCTCTTA TCATCCTTATGAAGA TERM 1642 1459121 - 1459084 - T 93 -10.7 -3.70773 | gap 1, opp_overlap 1459078 1459084, overlap 1459081 CGGTATAGTTAATAA GAGCTGAGAACGACGCAA CAT TAGTGTC-TTCTCAGCTC TTATCATCCTTATGA TERM 1643 1459084 - 1459121 + T 100 -12.9 -3.48684 | gap 1, opp_overlap 1459084 1459081, overlap 1459078 CGGTATAGTTAATAA GAGCTGAGAACGACGCAA CAT TAGTGTC-TTCTCAGCTC TTATCATCCTTATGA ansA 1460201 - 1459227 - | L-asparaginase cmk 1460277 - 1460933 + | cytidylate kinase TERM 1644 1460947 - 1461003 + F 88 -9.3 -4.24787 | gap 1 AGACAAATAAGGACA GCTATTTAGAGTGATTCGTA-TTTAA CTAAGT TTAAAGTGCGAATTATTTTAAATAGC TATTTTTATTCTATA rpsA 1461245 - 1462423 + | 30S ribosomal protein S1 TERM 1645 1462482 - 1462444 - f 76 -9.1 -3.0517 | opp_overlap 1462447, overlap 1462443 1462447 AGTTATCATACAAAC TCATTCCCAATTAAAGT TTAAG ACTTTAATTGGGAATTT TCATTTTCTCACAAT TERM 1646 1462479 - 1462447 - f 100 -15.2 -2.74244 | opp_overlap 1462447, overlap 1462444 1462443 TATCATACAAACTCA TTCCCAATTAAAGT TTAAG ACTTTAATTGGGAA TTTTCATTTTCTCAC TERM 1647 1462447 - 1462479 + F 100 -15.9 -4.73108 | opp_overlap 1462447 1462444 1462443 TATCATACAAACTCA TTCCCAATTAAAGTT TAA GACTTTAATTGGGAA TTTTCATTTTCTCAC engA 1462648 - 1463958 + | GTP-binding protein EngA gpsA 1463974 - 1464972 + | glycerol-3-phosphate dehydrogenase TERM 1648 1465012 - 1465049 + F 78 -10.1 -2.66106 | opp_overlap 1465025, overlap 1465010 1465023 1465025 AATTTTTCGCAGATT TGTACATAAAATACTGA TATT TCAGTGTTTTAAGTGCA TAAATTATTGCGGTA TERM 1649 1465211 - 1465201 - g 80 -6.8 -4.72473 | opp_overlap 1465208 TTAACTAAAAAAGAA GCTG GTT CAGC TGTAGATGCTGTTTT SH1438 1465141 - 1465413 + | DNA-binding protein II tnp 1465792 - 1465415 - | IS1272 transposase TERM 1650 1465495 - 1465463 - GT 95 -8 -5.55698 | opp_overlap 1465463 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 1651 1465463 - 1465495 + gT 93 -8 -5.35222 | opp_overlap 1465463 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT tnp 1467090 - 1465756 - | IS1272 transposase TERM 1652 1466204 - 1466190 - GR 77 -5.8 -4.75289 | CATTATAAGATAAAA CAAATT GGG AATTTG TCGCTATTTGTAAAT TERM 1653 1466958 - 1466974 + gr 71 -8.1 -3.32066 | CACCACGGTGATGTC TGAATTC GTC GAATTCA TTGTCAGGAATTGTT SH1441 1467323 - 1467174 - | hypothetical protein TERM 1654 1467334 - 1467293 - G 100 -11.1 -4.44448 | opp_overlap 1467294 1467296, overlap 1467296 AGTATTGTAAATAAA GAAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTAT TTCTCTAGGGTTTAT TERM 1655 1467294 - 1467333 + g 100 -12.4 -4.07562 | opp_overlap 1467293 1467296, overlap 1467296 GTATTGTAAATAAAG AAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTA TTTCTCTAGGGTTTA TERM 1656 1467296 - 1467331 + g 100 -15 -3.62348 | opp_overlap 1467293 1467296, overlap 1467294 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT TERM 1657 1467331 - 1467296 - G 100 -17.2 -4.33281 | opp_overlap 1467296 1467294, overlap 1467293 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT TERM 1658 1468060 - 1468073 + G 71 -5.3 -4.59109 | AAATGTATCAAGCCG CTGAT GTAC ATCAG TTTTTAAAAGATATC SH1442 1467546 - 1468133 + | hypothetical protein ubiE 1468126 - 1468845 + | ubiquinone/menaquinone biosynthesis methyltransferase gerCC 1468858 - 1469814 + | heptaprenyl diphosphate syntase component II TERM 1659 1469842 - 1469872 + F 100 -16.4 -4.15222 | opp_overlap 1469845, overlap 1469845 TTGAAAGCGCTTTAA CAACCTGTTACTAT TAA ATAGTAGCAGGTTG TTTGTTACACAAAAT TERM 1660 1469845 - 1469869 + F 100 -12.3 -4.20367 | opp_overlap 1469845, overlap 1469842 AAAGCGCTTTAACAA CCTGTTACTAT TAA ATAGTAGCAGG TTGTTTGTTACACAA TERM 1661 1469869 - 1469845 - f 86 -10.1 -3.6279 | opp_overlap 1469845 1469842 AAAGCGCTTTAACAA CCTGTTACTAT TAA ATAGTAGCAGG TTGTTTGTTACACAA ndk 1469962 - 1470411 + | nucleoside diphosphate kinase TERM 1662 1470515 - 1470557 + F 100 -9.5 -5.72207 | gap 2, opp_overlap 1470518, overlap 1470518 TTTAGTCAACATTTT AAAGGTAGGACAATGAATTCA AAA TGAATTC-T-GTCCTACCTTC TTTTTTTAATTTGAA TERM 1663 1470554 - 1470518 - f 93 -11.2 -3.6707 | gap 2, opp_overlap 1470518 1470515 AGTCAACATTTTAAA GGTAGGACAATGAATTCA AAA TGAATTC-T-GTCCTACC TTCTTTTTTTAATTT TERM 1664 1470518 - 1470554 + F 100 -11.2 -4.90519 | gap 2, opp_overlap 1470518, overlap 1470515 AGTCAACATTTTAAA GGTAGGACAATGAATTCA AAA TGAATTC-T-GTCCTACC TTCTTTTTTTAATTT aroC 1470724 - 1471890 + | chorismate synthase aroB 1471923 - 1472987 + | 3-dehydroquinate synthase aroA 1473000 - 1474298 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1665 1474992 - 1474979 - g 77 -3.1 -5.4588 | TAAAATTACAAAAAA CCTTC TATC GAAAG ATCCCGATTTTATTC SH1449 1474305 - 1475549 + | hypothetical protein TERM 1666 1475586 - 1475619 + G 77 -8.5 -3.6943 | gap 1, opp_overlap 1475586, overlap 1475591 AAACACTTACACAAA TGAAACAAAGTTATAT TGA ATATG-CTTTGTTTCA TTATCATTTTAAATC TERM 1667 1475619 - 1475586 - g 71 -6.3 -4.09542 | gap 1, opp_overlap 1475586 1475591 AAACACTTACACAAA TGAAACAAAGTTATAT TGA ATATG-CTTTGTTTCA TTATCATTTTAAATC SH1450 1475585 - 1476100 + | hypothetical protein SH1451 1476123 - 1476722 + | hypothetical protein TERM 1668 1477035 - 1477049 + G 71 -8.6 -3.14132 | TCGATAGACCTTCAG TAGCTG GTA CAGCTA TTGCTGCACACGAAG SH1452 1476758 - 1477465 + | hypothetical protein TERM 1669 1477586 - 1477626 + F 95 -5 -6.04324 | gap 2, opp_overlap 1477587 1477598 1477599, overlap 1477587 AGATATCCTTATAAG AGAGTAGAACAATGAATTCA AGA TGAATTC-T-GTTCTGCTCC TTTTTTATTTTTTAA TERM 1670 1477587 - 1477625 + F 81 -8.5 -4.18934 | gap 2, opp_overlap 1477587 1477598 1477599, overlap 1477586 GATATCCTTATAAGA GAGTAGAACAATGAATTCA AGA TGAATTC-T-GTTCTGCTC CTTTTTTATTTTTTA SH1453 1477756 - 1478073 + | hypothetical protein SH1454 1478101 - 1479231 + | hypothetical protein SH1455 1479233 - 1480435 + | tRNA CCA-pyrophosphorylase SH1456 1480422 - 1481393 + | hypothetical protein TERM 1671 1483743 - 1483705 - g 100 -11.4 -4.97957 | opp_overlap 1483711 1483712 1483719 TACACAACAACAAAA TCAAAACTATAAAATTGT TCA ACAATTTAATAATTTTGA TAAGACAATTTTACT TERM 1672 1484061 - 1484023 - g 75 -4.8 -4.99861 | overlap 1484024 CAGTAACTATAAAAA CTTTTTTGCTCAAACTTT AGA AAATTATAAGCAAAAAAA GGGCGACATTAAACA dinG 1481426 - 1484128 + | ATP-dependent DNA helicase TERM 1673 1484323 - 1484334 + G 77 -5.8 -4.67234 | AATAAACGTTCAAGT GGCA AGAT TGCC TTTTTACAATTACGT TERM 1674 1484626 - 1484614 - g 76 -2.7 -5.40072 | TTGCGTTCAAAAAAA CAACA TGC TGTTA TGAAAATCAGAAATG asnC 1484239 - 1485531 + | asparaginyl-tRNA synthetase TERM 1675 1485562 - 1485589 + F 100 -10.6 -4.70879 | opp_overlap 1485561, overlap 1485563 ACCATATTAATTTAC TCGTCCAGTCAG CATG TTGACTGGACGC TTTTTCAACTTTAAA TERM 1676 1485563 - 1485588 + F 100 -14.1 -3.41804 | opp_overlap 1485561, overlap 1485562 CCATATTAATTTACT CGTCCAGTCAG CATG TTGACTGGACG CTTTTTCAACTTTAA SH1459 1485621 - 1486307 + | DNA replication-like protein nth 1486297 - 1486956 + | endonuclease-like protein SH1461 1486961 - 1487290 + | hypothetical protein TERM 1677 1487306 - 1487344 + T 71 -7.7 -3.69842 | gap 1, opp_overlap 1487306 1487305 1487308, overlap 1487304 TACTATAACAGTAAG TAGCCAGTAAAATGAGTT ATTT AATTCATCT-ACTGGCTA TATTTATATTCAAAT TERM 1678 1487383 - 1487430 + T 100 -13.9 -2.9856 | opp_overlap 1487383 1487391, overlap 1487388 1487391 TTGTATCAATGAATA TAAAGAAAGGCAATTTCTATT TGATGT AATAGAAATTGCCTTCTTTTA ATTATTTAACATTTC TERM 1679 1487430 - 1487383 - T 100 -13.9 -3.27029 | opp_overlap 1487383 1487388 1487391, overlap 1487391 TTGTATCAATGAATA TAAAGAAAGGCAATTTCTATT TGATGT AATAGAAATTGCCTTCTTTTA ATTATTTAACATTTC TERM 1680 1487388 - 1487425 + T 100 -11.6 -4.62203 | opp_overlap 1487383 1487391, overlap 1487383 1487391 TCAATGAATATAAAG AAAGGCAATTTCTATT TGATGT AATAGAAATTGCCTTC TTTTAATTATTTAAC TERM 1681 1487422 - 1487391 - T 100 -13.3 -4.69415 | opp_overlap 1487388 1487383 1487391, overlap 1487383 ATGAATATAAAGAAA GGCAATTTCTATT TGATGT AATAGAAATTGCC TTCTTTTAATTATTT TERM 1682 1487391 - 1487422 + T 100 -13.3 -4.39448 | opp_overlap 1487391 1487383, overlap 1487388 1487383 ATGAATATAAAGAAA GGCAATTTCTATT TGATGT AATAGAAATTGCC TTCTTTTAATTATTT pbp2 1489732 - 1487453 - | penicillin-binding protein 2 TERM 1683 1488903 - 1488918 + g 76 -2.6 -5.40474 | GTACGATCTACTAAA TTAGCT TTTA AGTTAA TTTTTTTAGCAGCAT recU 1490256 - 1489729 - | Holliday junction-specific endonuclease SH1464 1490660 - 1490998 + | hypothetical protein SH1465 1491009 - 1491572 + | hypothetical protein SH1466 1491583 - 1491921 + | hypothetical protein TERM 1684 1492016 - 1491994 - f 74 -8.6 -3.2827 | opp_overlap 1491994 GTATTCAATTAGCAA CAGATATTCT ATA AAAATATCTG TTATAGTATAAAATA TERM 1685 1492457 - 1492478 + F 100 -8.7 -5.77571 | TCATGAACTAGTTTA GCTCTCCCA TTGA TTGGAGAGC TTTTTGTTTTTTACT SH1467 1492555 - 1493688 + | hypothetical protein TERM 1686 1493800 - 1493754 - f 78 -9.8 -2.60988 | opp_overlap 1493758, overlap 1493751 AATTTAATCAATTCA TTAGCACTCTTATTATTACT GATGTAA AGTGATAATAAGAGTGTTAA ATATAGATACAAATA TERM 1687 1493758 - 1493796 + F 100 -12.8 -3.1355 | opp_overlap 1493754 1493751 TAATCAATTCATTAG CACTCTTATTATTACT GATGTAA AGTGATAATAAGAGTG TTAAATATAGATACA SH1468 1493854 - 1494492 + | hypothetical protein TERM 1688 1494650 - 1494687 + F 74 -2.8 -5.65927 | gap 1, opp_overlap 1494653 1494655, overlap 1494653 1494655 TGCCTACCAGATTAA G-AATAGCCTGTTACAT TAAGT ATGTCTCAGGCTGTTAC TTTTTTATTTGAATG TERM 1689 1494850 - 1494829 - g 86 -6 -5.5604 | opp_overlap 1494828 1494829 TCAAGTAATAAAAAA GGTATATT TAAATC AATATACC GCTTCTTTTGTTGGT SH1469 1494725 - 1498168 + | hypothetical protein SH1470 1498185 - 1499063 + | hypothetical protein TERM 1690 1506592 - 1506579 - g 80 -9.5 -3.52668 | opp_overlap 1506578 1506580 AAGCGACTGATACAA CGCCG CCAA CGGCG CCTTTAGTTACTAGC TERM 1691 1506580 - 1506594 + G 73 -7 -3.95584 | opp_overlap 1506579, overlap 1506578 AGCGACTGATACAAC GCCGCC AAC GGCGCC TTTAGTTACTAGCGA TERM 1692 1506862 - 1506849 - g 80 -9.5 -3.52668 | opp_overlap 1506846 1506850 AAGCGACTGATACAA CGCCG CCAA CGGCG CCTGTGGTTACTAGC TERM 1693 1507132 - 1507119 - g 80 -9.5 -3.52668 | opp_overlap 1507116 1507120 AAGCGACTGATACAA CGCCG CCAA CGGCG CCTGTGGTTACTAGC TERM 1694 1507672 - 1507659 - g 80 -9.5 -3.52668 | opp_overlap 1507656 1507660 AAGCGACTGATACAA CGCCG CCAA CGGCG CCTGTGGTTACTAGT TERM 1695 1509292 - 1509279 - g 80 -9.5 -3.52668 | opp_overlap 1509276 1509280 AAGCGACTGATACAA CGCCG CCAA CGGCG CCTGTGGTTACTAGT TERM 1696 1509832 - 1509819 - g 80 -9.5 -3.52668 | opp_overlap 1509816 1509820 AAGCGACTGATACAA CGCCG CCAA CGGCG CCTGTGGTTACTAGT TERM 1697 1510642 - 1510629 - g 80 -9.5 -3.52668 | opp_overlap 1510626 1510630 AAGCGACTGATACAA CGCCG CCAA CGGCG CCTGTGGTTACTAGT TERM 1698 1511182 - 1511169 - g 80 -9.5 -3.56216 | opp_overlap 1511166 1511170 AAGCAACTGATACAA CGCCG CCAA CGGCG CCTGTGGTTACTAGC TERM 1699 1512392 - 1512380 - g 75 -4.9 -4.92756 | overlap 1512388 AGTACTAAAAAGAAA GTAAA AGA TTTAC CAAGTACTGGTAAAA SH1471 1499450 - 1512514 + | hypothetical protein TERM 1700 1512542 - 1512571 + F 100 -11.6 -5.10154 | opp_overlap 1512542 TACTAATTAGAAAAA TCCACTGAAATC TTAAAT GATTTCGGTGGA TTTTTGATTTTAAAT TERM 1701 1512571 - 1512542 - f 100 -9.4 -4.99861 | opp_overlap 1512542 TACTAATTAGAAAAA TCCACTGAAATC TTAAAT GATTTCGGTGGA TTTTTGATTTTAAAT SH1472 1513083 - 1516454 + | hypothetical protein TERM 1702 1516480 - 1516517 + T 100 -17.4 -3.77303 | opp_overlap 1516480 AATTGACTAAAAAAA CACCCCTTTATTTAAT GTCAAA ATTAAATAAAGGGGTG TTATGTATTTAAATA TERM 1703 1516517 - 1516480 - T 100 -17.4 -5.54894 | opp_overlap 1516480 AATTGACTAAAAAAA CACCCCTTTATTTAAT GTCAAA ATTAAATAAAGGGGTG TTATGTATTTAAATA SH1473 1516937 - 1516536 - | hypothetical protein TERM 1704 1517044 - 1517006 - R 80 -7.5 -4.59946 | opp_overlap 1517017, overlap 1517003 AAAATAAGAAAATAA GGAATGGCATAGATTTC ATTAA GAAATCATTTCCATTCC CATAATATTCTTTAA SH1474 1517760 - 1517056 - | hypothetical protein SH1475 1517965 - 1518159 + | hypothetical protein SH1476 1518172 - 1518423 + | hypothetical protein SH1477 1518448 - 1519560 + | hypothetical protein TERM 1705 1519850 - 1519822 - g 86 -6.1 -5.4588 | CAAAATGATAAAAAA CCAACAAATAAAA TCA CTGTATTTGCTGG ACAAGATAAAGAAGC SH1478 1519597 - 1520031 + | hypothetical protein TERM 1706 1520035 - 1520025 - f 74 -6.8 -4.26903 | opp_overlap 1520025 1520023 TGCATTTGACGAAAA CTGC TAA GCAG TATAATTTTAAATAA TERM 1707 1520150 - 1520188 + F 100 -16.5 -6.11229 | opp_overlap 1520157 GTACTCACTTTTCAA TCCCAAATATAAAATTA AAAAC TAATTTTATATTTGGGA TTTTTTTATTTTAAT thyA 1520268 - 1521224 + | thymidylate synthase dfrA 1521285 - 1521764 + | dihydrofolate reductase SH1481 1521791 - 1522636 + | hypothetical protein TERM 1708 1523216 - 1523196 - g 72 -2.5 -5.22006 | overlap 1523197 1523198 TTATTACAAGAAAAA CCCTGCTCA TTA TGAGCAATA TCAACGTGGATCAGG SH1482 1522750 - 1523277 + | methionine sulfoxide reductase A msrB 1523270 - 1523698 + | methionine sulfoxide reductase B SH1484 1523711 - 1524211 + | phosphotransferase system enzyme IIA-like protein SH1485 1524211 - 1524432 + | hypothetical protein TERM 1709 1524547 - 1524584 + F 100 -10 -4.76171 | gap 1 CTAGTCATCTTAGCG GGGGTGGAAC-GAATTC TTTAC GAATTCTGTCCCACTCC TTTTGTGCTTTTTTA TERM 1710 1525620 - 1525609 - g 74 -5.8 -4.51197 | opp_overlap 1525609 1525608, overlap 1525619 CAGAATCAATCAAAA CGTC AAAT GACG CTTCTAACGAAGCTA ctpA 1524711 - 1526183 + | carboxy-terminal processing proteinase ctpA SH1487 1526202 - 1526705 + | hypothetical protein TERM 1711 1527337 - 1527326 - g 70 -4.4 -4.7497 | CTTAGGTAGTAAAAA GCTT AATC AAGC TATACGTGAAAATTT TERM 1712 1527643 - 1527624 - g 70 -7.2 -3.75897 | gap 1, overlap 1527625 AATTTTGAATCTAAA GGGTATGGT AGA ACCAT-CCC TGAAGATCAACTTAC TERM 1713 1527714 - 1527698 - g 72 -5.9 -4.45261 | TAAAGAAATTGAAAA TGATCGA GAG TCAATCA TTAAACAAATGGAGA murG 1526724 - 1527791 + | N-acetylglucosaminyl transferase SH1489 1527810 - 1528433 + | hypothetical protein TERM 1714 1528476 - 1528440 - f 73 -8.2 -3.42605 | opp_overlap 1528440, overlap 1528438 1528436 1528459 GCTACGTAAAATATA TCGAGATACATTCT TAAAATGCG AGATTGTATCTCGA TTTTTTTAAAGGATT TERM 1715 1528440 - 1528476 + F 100 -8.9 -5.41746 | opp_overlap 1528438 1528436 1528440 1528459 GCTACGTAAAATATA TCGAGATACATTCTT AAAATGC GAGATTGTATCTCGA TTTTTTTAAAGGATT TERM 1716 1528560 - 1528588 + F 89 -7.5 -5.06816 | opp_overlap 1528560 AAACTAAATAAAAAA GCAGTGAACCT CGGCATT AGATTCACTGC TTTTTATTAAAACGT TERM 1717 1528588 - 1528560 - f 100 -9.7 -5.74086 | opp_overlap 1528560 AAACTAAATAAAAAA GCAGTGAACCT CGGCATT AGATTCACTGC TTTTTATTAAAACGT SH1490 1528967 - 1529626 + | hypothetical protein TERM 1718 1530243 - 1530232 - g 70 -4.4 -4.67048 | GGATTTCAAAATAAA CTTG AACT CAAG ACGAACTATGAAGAA arlS 1529623 - 1530984 + | putative protein histidine kinase ArlS TERM 1719 1531000 - 1531022 + F 86 -7 -5.1675 | ATATTTAAATCGAAA CTGGGACAAT TAA GTTGTTCCGG TTTTTTAATGCATAA TERM 1720 1532856 - 1532846 - g 74 -5.4 -4.65584 | overlap 1532853 ATAAATCAGATAAAA TGGA TAA TCCA GATATGGAAAGACCT kgd 1531267 - 1534071 + | alpha-ketoglutarate decarboxylase TERM 1721 1534727 - 1534708 - g 84 -6.6 -5.02476 | ACAGCTGCTAAAAAA TTATTAGA AGTT TCTAATAA TACAGCAATGTTAAC TERM 1722 1534784 - 1534770 - g 73 -7.2 -4.04719 | overlap 1534780 AGTAGATATGACAAA CGTAAT GGA ATTACG TAAACGTAAGAAAGA TERM 1723 1535326 - 1535309 - g 80 -7.1 -4.60487 | TAGGATTCTTAAAAA CGATTAA AGAA TTAATCG AAAGCCCTGAAGATT odhB 1534087 - 1535358 + | dihydrolipoamide acetyltransferase TERM 1724 1535392 - 1535417 + F 100 -9.8 -5.48063 | TCAAACTAATATTGA TACAACGGCG TCACAT CGTCGTTGTA TTTTTTATCTTAAAT SH1494 1535559 - 1535657 + | hypothetical protein SH1495 1535755 - 1535967 + | hypothetical protein tnp 1536118 - 1537290 + | transposase for IS256 SH1497 1537604 - 1537735 + | hypothetical protein SH1498 1537783 - 1538589 + | hypothetical protein SH1499 1538620 - 1538829 + | hypothetical protein TERM 1725 1538988 - 1538976 - g 77 -4.9 -5.05228 | opp_overlap 1538976, overlap 1538983 AGTAAATTACAAAAA TGATT AAG AATCA ATATATTAATTCAGA SH1500 1538975 - 1539766 + | hypothetical protein SH1501 1539779 - 1541668 + | hypothetical protein TERM 1726 1542391 - 1542407 + G 72 -5.1 -4.71382 | TACTTAACTATGGAT GCAATCG CAG CAATTGC TTTTTCAATGATTGT braB 1541797 - 1543140 + | branched-chain amino acid carrier protein TERM 1727 1543197 - 1543238 + F 95 -11.1 -4.44448 | opp_overlap 1543198 1543200, overlap 1543200 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 1728 1543237 - 1543198 - f 100 -12.4 -4.07562 | opp_overlap 1543197 1543200, overlap 1543200 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 1729 1543200 - 1543235 + F 100 -17.2 -4.33281 | opp_overlap 1543198 1543200, overlap 1543197 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 1730 1543235 - 1543200 - f 100 -15 -3.62348 | opp_overlap 1543200 1543197, overlap 1543198 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH1503 1543208 - 1543357 + | hypothetical protein TERM 1731 1543573 - 1543557 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 1732 1544327 - 1544341 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 1733 1545069 - 1545037 - g 90 -8 -5.35222 | opp_overlap 1545037 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 1734 1545037 - 1545069 + G 93 -8 -5.55698 | opp_overlap 1545037 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 1543441 - 1545120 + | IS1272 transposase SH1505 1546290 - 1545121 - | hypothetical protein SH1506 1546943 - 1546317 - | hypothetical protein SH1507 1547234 - 1546965 - | hypothetical protein SH1508 1547398 - 1547706 + | hypothetical protein cspA 1547911 - 1548111 + | major cold shock protein CspA TERM 1735 1548143 - 1548164 + T 100 -8.8 -5.80951 | opp_overlap 1548143 TATTGACTTTAGTAA CACCTTAC CAAGAT GTAAGGTG TTTTTTATTTTGGCT TERM 1736 1548164 - 1548143 - T 74 -8.8 -3.16881 | opp_overlap 1548143 TATTGACTTTAGTAA CACCTTAC CAAGAT GTAAGGTG TTTTTTATTTTGGCT TERM 1737 1548244 - 1548212 - T 75 -9.3 -2.63089 | opp_overlap 1548213, overlap 1548211 1548209 GATGAGTCCAAATAT TGAGATTAAGCAACT TTA AGTTGTTTAATCTCT TTTTTTGTTGTTGAG TERM 1738 1548213 - 1548243 + T 100 -15 -5.95946 | opp_overlap 1548212 1548211 1548209 ATGAGTCCAAATATT GAGATTAAGCAACT TTA AGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 1549533 - 1548217 - | transposase for ISSha1 TERM 1739 1549475 - 1549489 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 1740 1549618 - 1549648 + r 100 -16.4 -4.30719 | opp_overlap 1549618 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCA TERM 1741 1549648 - 1549618 - R 100 -14.2 -5.20783 | opp_overlap 1549618 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCA lysA 1550975 - 1549710 - | diaminopimelate decarboxylase alr2 1552053 - 1550977 - | alanine racemase 2 hipO 1553211 - 1552060 - | hippurate hydrolase TERM 1742 1553414 - 1553444 + r 84 -10.6 -3.0792 | gap 1, opp_overlap 1553414 TAAGAATAACTAAAA CTGAGAAGG-GCT CAGTTA AGCGCCTTCTCAG TTCAGTAAGCTATTG TERM 1743 1553444 - 1553414 - R 100 -11.3 -4.61824 | gap 1, opp_overlap 1553414 TAAGAATAACTAAAA CTGAGAAGG-GCTC AGTT AAGCGCCTTCTCAG TTCAGTAAGCTATTG TERM 1744 1553476 - 1553486 + r 76 -4 -5.44119 | GATTATGCAATACAG CTAT AAA ATAG TTTTTTTGACATAGC dapD 1554243 - 1553524 - | tetrahydrodipicolinate acetyltransferase dapB 1555008 - 1554283 - | dihydrodipicolinate reductase dapA 1555892 - 1555008 - | dihydrodipicolinate synthase asd 1556883 - 1555894 - | aspartate semialdehyde dehydrogenase TERM 1745 1556824 - 1556834 + g 73 -4 -5.07486 | GTTTTTGCGATCAAT TGTT TCT AACA TTTTTGTTCCAACTA lysC 1558151 - 1556949 - | aspartate kinase SH1519 1558270 - 1558163 - | hypothetical protein TERM 1746 1558194 - 1558223 + g 74 -9.4 -3.06418 | opp_overlap 1558195, overlap 1558191 1558198 1558201 CACACGCTATAAAAA AGAACAAGTTCG GAAGTG CGAACTTGTTCG TGATTTATATACAAG TERM 1747 1558222 - 1558195 - G 100 -12.9 -5.26918 | opp_overlap 1558194 1558191 1558198 1558201 ACACGCTATAAAAAA GAACAAGTTCG GAAGTG CGAACTTGTTC GTGATTTATATACAA TERM 1748 1558198 - 1558219 + g 75 -8.8 -3.36538 | opp_overlap 1558195, overlap 1558194 1558191 1558201 CGCTATAAAAAAGAA CAAGTTCG GAAGTG CGAACTTG TTCGTGATTTATATA TERM 1749 1558388 - 1558404 + r 70 -5.2 -4.4846 | AATATATACTGATGA TTGATG CGCCT CATCAA TTTCTTATTCAATTG TERM 1750 1558590 - 1558559 - R 100 -13.8 -5.23316 | opp_overlap 1558559 TATGATATTAAAAAA CGCACTCCCCAATT TAGT AATAGGGAAGTGCG TATGTGCTTATATAT TERM 1751 1558559 - 1558590 + r 91 -11.6 -3.05333 | opp_overlap 1558559 TATGATATTAAAAAA CGCACTCCCCAATT TAGT AATAGGGAAGTGCG TATGTGCTTATATAT SH1520 1560209 - 1558605 - | hypothetical protein SH1521 1560363 - 1561262 + | hypothetical protein TERM 1752 1561429 - 1561476 + F 100 -12.9 -5.28778 | overlap 1561431 1561475 GCTTTCAGTCACCTT TACGGGAGTGATACAGTTTTT CATTAT AAATTCTGTATCACTCCCGTC TTTTTTATAGATAAT TERM 1753 1561431 - 1561474 + F 100 -15.5 -4.2748 | overlap 1561429 TTTCAGTCACCTTTA CGGGAGTGATACAGTTTTT CATTAT AAATTCTGTATCACTCCCG TCTTTTTTATAGATA TERM 1754 1562441 - 1562425 - g 79 -3.8 -5.48213 | opp_overlap 1562425 TATGTAAAAGAAAAA TCATTA AAAGA TAATGA TGTTATGAGAGAATT SH1522 1561633 - 1562583 + | thioredoxine reductase TERM 1755 1562631 - 1562654 + F 100 -14 -3.35934 | opp_overlap 1562634, overlap 1562634 ATTCAAGGGGTATTA CAAGGTAGCA ACAC TGCTACCTTG TTCTCGAATATATGG TERM 1756 1562634 - 1562651 + F 89 -9.9 -3.81447 | opp_overlap 1562634, overlap 1562631 CAAGGGGTATTACAA GGTAGCA ACAC TGCTACC TTGTTCTCGAATATA TERM 1757 1562651 - 1562634 - f 85 -9.9 -3.41527 | opp_overlap 1562634 1562631 CAAGGGGTATTACAA GGTAGCA ACAC TGCTACC TTGTTCTCGAATATA SH1523 1562769 - 1563695 + | hypothetical protein SH1524 1563697 - 1564617 + | hypothetical protein pstB 1564728 - 1565603 + | phosphate ABC transporter, ATP-binding protein pstB TERM 1758 1565827 - 1565811 - g 73 -4.5 -4.91873 | GATATCAATGAAAAA GTAATTA TGT TAATCAC AAAACAACAGCCGAT SH1526 1565613 - 1566257 + | hypothetical protein TERM 1759 1566342 - 1566291 - T 91 -9.8 -4.23528 | gap 1, opp_overlap 1566299, overlap 1566294 TAACCCAAAATCAAA CAATTAAACCCTGATAA-GACTGAT TAA ATCAGTTATTATCAGGGTTTTACTA TAAATCAAAATATAT TERM 1760 1566339 - 1566294 - T 95 -11.5 -4.21465 | gap 1, opp_overlap 1566299, overlap 1566291 CCCAAAATCAAACAA TTAAACCCTGATAA-GACTGAT TAA ATCAGTTATTATCAGGGTTTTA CTATAAATCAAAATA TERM 1761 1566299 - 1566334 + T 100 -13.6 -4.3586 | gap 1, opp_overlap 1566294 1566291 AATCAAACAATTAAA CCCTGATAA-GACTGAT TAA ATCAGTTATTATCAGGG TTTTACTATAAATCA SH1527 1568180 - 1566369 - | hypothetical protein SH1528 1568351 - 1568692 + | hypothetical protein TERM 1762 1568701 - 1568750 + T 72 -5.1 -4.99568 | opp_overlap 1568701 AAGATAATAAATAAA GGCGTTTGAAACATTTTAACA TGCTTTTT TGCATATATGTTTCAAACGCC TTTTATTTACTATTC TERM 1763 1568750 - 1568701 - T 81 -7.3 -4.77442 | opp_overlap 1568701 AAGATAATAAATAAA GGCGTTTGAAACATTTTAACA TGCTTTTT TGCATATATGTTTCAAACGCC TTTTATTTACTATTC SH1529 1569813 - 1568797 - | hypothetical protein TERM 1764 1569178 - 1569189 + g 74 -3 -5.37593 | AAACAAGACCGTATC GTTA TTAA TAAC TTTTTTAGTTTCAGC SH1530 1570678 - 1569902 - | hypothetical protein TERM 1765 1571530 - 1571496 - R 100 -16.7 -3.98214 | opp_overlap 1571500, overlap 1571500 ACTAGTTACGATAAA TAAAGGCTGCGACAT CCACC ATGTCACAGCCTTTA ATAACATCAATTTAT TERM 1766 1571526 - 1571500 - R 100 -13.1 -4.59342 | opp_overlap 1571500, overlap 1571496 GTTACGATAAATAAA GGCTGCGACAT CCACC ATGTCACAGCC TTTAATAACATCAAT TERM 1767 1571500 - 1571526 + r 93 -10.9 -3.74872 | opp_overlap 1571500 1571496 GTTACGATAAATAAA GGCTGCGACAT CCACC ATGTCACAGCC TTTAATAACATCAAT femB 1572801 - 1571542 - | FemB (factor essential for methicillin resistance B) protein femA 1574081 - 1572819 - | factor essential for methicillin resistance A(FemA) protein tnp 1575986 - 1574292 - | IS1272 transposase TERM 1768 1574358 - 1574390 + g 90 -8 -5.35222 | opp_overlap 1574358 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 1769 1574390 - 1574358 - G 93 -8 -5.55698 | opp_overlap 1574358 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 1770 1575100 - 1575086 - G 77 -5.8 -4.75289 | CATTATAAGATAAAA CAAATT GGG AATTTG TCGCTATTTGTAAAT TERM 1771 1575854 - 1575870 + g 70 -8.1 -3.32066 | CACCACGGTGATGTC TGAATTC GTC GAATTCA TTGTCAGGAATTGTT SH1534 1576219 - 1576070 - | hypothetical protein TERM 1772 1576230 - 1576189 - G 100 -11.1 -4.44448 | opp_overlap 1576190 1576192, overlap 1576192 AGTATTGTAAATAAA GAAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTAT TTCTCTAGGGTTTAT TERM 1773 1576190 - 1576229 + g 100 -12.4 -4.07562 | opp_overlap 1576189 1576192, overlap 1576192 GTATTGTAAATAAAG AAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTA TTTCTCTAGGGTTTA TERM 1774 1576192 - 1576227 + g 100 -15 -3.62348 | opp_overlap 1576189 1576192, overlap 1576190 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT TERM 1775 1576227 - 1576192 - G 100 -17.2 -4.33281 | opp_overlap 1576192 1576190, overlap 1576189 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT SH1535 1576325 - 1576645 + | hypothetical protein trpA 1577373 - 1576642 - | tryptophan synthase subunit alpha trpB 1578577 - 1577366 - | tryptophan synthase subunit beta TERM 1776 1577887 - 1577901 + g 79 -5.7 -5.07053 | ATGCAACAACTGCAT CTGGT AATCG ACCAG TTTTTTGAAGTAATT trpF 1579205 - 1578579 - | phosphoriborylanthranilate isomerase trpC 1579984 - 1579202 - | indole-3-glycerol-phosphate synthase trpD 1580984 - 1579968 - | anthranilate phosphoribosyltransferase trpG 1581558 - 1580959 - | anthranilate synthase component II SH1542 1582964 - 1581555 - | anthranilate synthase component I TERM 1777 1583019 - 1582989 - R 100 -14.1 -5.14563 | CCTTTCACTAAAAAA CGTCAGCCTCCTT ATGTA AAGGACGCTGACG CGCGGTACCACCTTA TERM 1778 1583258 - 1583212 - R 95 -8.9 -4.98522 | AATTGTACATAAAAA CACCACAGCATACGCG-CTTTAC TCT ATAAGGACGCGT-TACCGTGGTG CCACCTTAGTTAACA SH1543 1584504 - 1583467 - | hypothetical protein TERM 1779 1584762 - 1584742 - g 79 -9.1 -3.37236 | AACCTAATCTTACAA TATCAGCAT TCG ACGCTGATA AAGATCAACTTGAAA tyrA 1584657 - 1585748 + | prephenate dehydrogenase SH1545 1587084 - 1585822 - | hypothetical protein TERM 1780 1587121 - 1587161 + H 86 -7.1 -5.04377 | opp_overlap 1587124 1587147 1587150 ATTTTTATTATATAC GAACATTTGTTCTTTTT CAATAAA AATAAGAACTAATGTTC TTTATTTTGTTTTGG SH1546 1587237 - 1587425 + | 4-oxalocrotonate tautomerase TERM 1781 1587471 - 1587510 + T 72 -5.9 -4.62203 | gap 2, opp_overlap 1587480, overlap 1587475 1587480 GGTGTTTATTAAAGT CGTAAAAAAGAGTGCACCC AATC GAGTGCGCTC-TTTT-ACG TTTTAGTTATTTAGA TERM 1782 1587475 - 1587508 + T 73 -8.9 -2.60658 | opp_overlap 1587480, overlap 1587471 1587480 TTTATTAAAGTCGTA AAAAAGAGTGCACCC AATC GAGTGCGCTCTTTTA CGTTTTAGTTATTTA TERM 1783 1587503 - 1587480 - T 95 -8.8 -5.07107 | opp_overlap 1587475 1587471 1587480 TAAAGTCGTAAAAAA GAGTGCACCC AATC GAGTGCGCTC TTTTACGTTTTAGTT TERM 1784 1587480 - 1587503 + T 83 -8.8 -4.4518 | opp_overlap 1587480, overlap 1587475 1587471 TAAAGTCGTAAAAAA GAGTGCACCC AATC GAGTGCGCTC TTTTACGTTTTAGTT msrR 1588490 - 1587513 - | peptide methionine sulfoxide reductase regulator MsrR TERM 1785 1589109 - 1589089 - g 71 -5.4 -4.52873 | overlap 1589090 TTTTTACAAAAAGAA CCCTGAGC GTTAT GCTCAAGA ACAACAAGACCGAGC msrA 1588637 - 1589143 + | methionine sulfoxide reductase A fmtC 1591739 - 1589217 - | oxacillin resistance-related FmtC protein TERM 1786 1590791 - 1590781 - G 86 -5.4 -5.64304 | opp_overlap 1590757 1590781, overlap 1590757 TAAGAGAATAAAAAA GATG TTA CATC TCTTGCAGGTACAAA TERM 1787 1591918 - 1591870 - R 74 -4.9 -5.0133 | gap 3, opp_overlap 1591885, overlap 1591872 TACTTTCTTAAAAAA GACGGGAACGAGAC-A-GAATCCA AAAA TGAATTCATTATCTCATTCCCG-C TAGGTAACTAAAACT TERM 1788 1591917 - 1591872 - R 81 -8.6 -4.13561 | gap 2, opp_overlap 1591885, overlap 1591870 CTTTCTTAAAAAAGA CGGGAACGAGAC-A-GAATCCA AAAA TGAATTCATTATCTCATTCCCG CTAGGTAACTAAAAC SH1550 1593210 - 1591981 - | hypothetical protein glcT 1594141 - 1593287 - | transcription antiterminator TERM 1789 1594265 - 1594221 - R 100 -13.9 -4.75776 | opp_overlap 1594215 1594221, overlap 1594193 1594213 AACTTAATGTAAAAA CTCCTTTCAACGTTTTGAA TGAGAGT TTCAACACATTGAAAGGAG TATGAATAAATTCTA alsT 1595760 - 1594303 - | amino acid carrier protein (Na+/alanine symporter) parC 1598376 - 1595977 - | DNA topoisomerase IV subunit A TERM 1790 1596041 - 1596027 - G 70 -7.2 -3.82084 | opp_overlap 1596027 1596025 CTTTAACATCAACAA CAAATG ACC CATTTG TGTATTGTTCAGATA parE 1600373 - 1598373 - | DNA topoisomerase IV subunit B SH1555 1600576 - 1601184 + | hypothetical protein TERM 1791 1601189 - 1601176 - f 80 -5.3 -5.2853 | GAGCCAAAAATAAAA TGGAT GTAA ATCCA ATACCGATAATAATG TERM 1792 1601204 - 1601231 + F 100 -9.2 -5.47431 | opp_overlap 1601203 1601204 AATACCGATAATAAT GCATTAAGCGTA TCAA TTCGCTTAGTGC TTTTTTATATCTTCA SH1556 1601351 - 1601650 + | hypothetical protein TERM 1793 1601732 - 1601685 - T 81 -10.2 -3.03554 | gap 1, opp_overlap 1601693, overlap 1601690 1601693 TTAACTAAGCATATA TAAAAGAACTGAGAAGACGCTCC CAT GTAGCAT-TTCTCAGTTTTTTTA ATACATATTAGTGAT TERM 1794 1601727 - 1601690 - T 75 -5.7 -4.64591 | gap 1, opp_overlap 1601693, overlap 1601685 1601693 TAAGCATATATAAAA GAACTGAGAAGACGCTCC CAT GTAGCAT-TTCTCAGTTT TTTTAATACATATTA TERM 1795 1601724 - 1601693 - T 76 -7.4 -4.41422 | gap 1, opp_overlap 1601693, overlap 1601690 1601685 GCATATATAAAAGAA CTGAGAAGACGCTCC CAT GTAGCAT-TTCTCAG TTTTTTTAATACATA TERM 1796 1601693 - 1601724 + T 82 -5.2 -5.53991 | gap 1, opp_overlap 1601693 1601690 1601685 GCATATATAAAAGAA CTGAGAAGACGCTCC CAT GTAGCAT-TTCTCAG TTTTTTTAATACATA SH1557 1602369 - 1601899 - | hypothetical protein TERM 1797 1602448 - 1602422 - R 100 -10.9 -5.49569 | overlap 1602434 TATTAACATAAAAAA GCCATGCCAAC ATAAA GTCAGCATGGC TTCAAAGTTCATATA citB 1605169 - 1602464 - | aconitate hydratase TERM 1798 1603902 - 1603918 + g 70 -2.3 -5.27923 | GCAGTTGAACCGTCA GCAAA ATTGATA TTTGC TTTTTTATCAAATTC TERM 1799 1605119 - 1605137 + g 77 -6 -4.8143 | overlap 1605121 GTACGTATATGACTG GCCATTTG CTT CAAATGTC TTTTTAGCTTGTTGC TERM 1800 1605121 - 1605135 + g 73 -7.2 -4.01369 | overlap 1605119 ACGTATATGACTGGC CATTTG CTT CAAATG TCTTTTTAGCTTGTT TERM 1801 1605437 - 1605408 - R 100 -12.3 -5.33866 | TAAATTCATAAAAAA CCCTCAAGTACTT TTAA AAGCACTTAAGGG TAATAATGTTATTAT opuD 1607102 - 1605465 - | glycine betaine transporter mscL 1607291 - 1607644 + | large-conductance mechanosensitive channel TERM 1802 1607656 - 1607694 + T 100 -12.6 -5.27477 | opp_overlap 1607658 ATAATCATATTTTAA GACCGTATGACAATATTG AAT TAATTTTGCCATACGGTC TTTTTTAATTCCACT TERM 1803 1607692 - 1607658 - T 88 -10.9 -3.08706 | opp_overlap 1607656 AATCATATTTTAAGA CCGTATGACAATATT GAATT AATTTTGCCATACGG TCTTTTTTAATTCCA SH1561 1610734 - 1607699 - | hypothetical protein TERM 1804 1609376 - 1609394 + g 72 -6.1 -4.32951 | opp_overlap 1609375 1609378, overlap 1609387 GTTTTCTCTCAAAGT CACTTTT TTATC AAAAGTG TTTGTTAATTGGAAT SH1562 1611863 - 1610739 - | hypothetical protein TERM 1805 1611121 - 1611131 + g 76 -2.6 -5.43487 | ATGTCACCTTTTGAA TTAA TCA TTAA TTTTTTGTATCCTTT TERM 1806 1611746 - 1611734 - G 76 -7.7 -3.94634 | opp_overlap 1611734 TATCACCCGAAATAA CCAGA ACA TCTGG TTTCTCTTCCTTCAA TERM 1807 1611734 - 1611746 + g 81 -7.7 -4.2772 | opp_overlap 1611734 TATCACCCGAAATAA CCAGA ACA TCTGG TTTCTCTTCCTTCAA TERM 1808 1611971 - 1611935 - R 91 -6.7 -5.37593 | opp_overlap 1611918 1611935, overlap 1611918 GTTCAAACTAAAAAA GATGGAACAATGATT AATTTAA ATTCATTGTCCCACC TATGTTATTAAGCAG SH1563 1612691 - 1612224 - | hypothetical protein TERM 1809 1612747 - 1612764 + r 74 -2.1 -5.63236 | TTACTCATTGTAATT TATTTAG ATTT TTAAATA TTTTTCTTTTTAAAT TERM 1810 1612840 - 1612811 - R 100 -9.5 -4.98911 | gap 1, opp_overlap 1612811 1612810 TACTACAAAAATAAA GGATTGTAA-ACCT TAA AGGTACTACAATCC ATTTAAAAATTATTT SH1564 1613092 - 1612850 - | hypothetical protein TERM 1811 1613286 - 1613263 - R 91 -10.4 -4.08485 | opp_overlap 1613263 1613266, overlap 1613266 CTCATTCAAATTAAA GAAGACTTTC CAAT GAAAGCCTTC TCAGTTCTCTAATTT TERM 1812 1613283 - 1613266 - R 70 -6.3 -4.15998 | opp_overlap 1613263 1613266, overlap 1613263 ATTCAAATTAAAGAA GACTTTC CAAT GAAAGCC TTCTCAGTTCTCTAA tkt 1615301 - 1613313 - | transketolase TERM 1813 1614779 - 1614761 - G 74 -6.1 -4.614 | opp_overlap 1614761 1614760 TTGAATCATATAAAA CAATTAG TTTAT CTAATTG GTTATGGCCAGCAAA SH1566 1615638 - 1615405 - | hypothetical protein TERM 1814 1615751 - 1615704 - R 100 -7.3 -5.66338 | gap 2, opp_overlap 1615719 AAATATAACAAAAAA GAGGTCTGGACAAAAGCTATTGA CATT TAAATAGCTTT-GA-CAGACCTC AAATTTATAATCATC SH1567 1615995 - 1615762 - | hypothetical protein TERM 1815 1616084 - 1616067 - H 74 -4.9 -5.10767 | opp_overlap 1616067, overlap 1616068 TAGTCAACATAAAAA CGAACAA ATGT TTGTTCA ATATTAAAATCAGTG TERM 1816 1616681 - 1616661 - g 82 -3.3 -5.72622 | overlap 1616664 TCTATAAAGAAAAAA CACGTTATA GAT TACAACCTG AAAATAGTACAATGA lexA 1616138 - 1616761 + | LexA repressor TERM 1817 1616810 - 1616858 + T 100 -10.5 -4.83677 | opp_overlap 1616816, overlap 1616811 1616816 TTATATATTTCTATA TAAAAAGAACTAGCAAAGTCTAC AAT GTAAACTTCGCTAGTTCTTTTGC TTTTCATTTTCTTTT TERM 1818 1616811 - 1616857 + T 100 -14 -3.46546 | opp_overlap 1616816, overlap 1616810 1616816 TATATATTTCTATAT AAAAAGAACTAGCAAAGTCTAC AAT GTAAACTTCGCTAGTTCTTTTG CTTTTCATTTTCTTT TERM 1819 1616816 - 1616852 + T 100 -13.9 -4.74084 | opp_overlap 1616816, overlap 1616811 1616810 ATTTCTATATAAAAA GAACTAGCAAAGTCTAC AAT GTAAACTTCGCTAGTTC TTTTGCTTTTCATTT TERM 1820 1616852 - 1616816 - T 100 -18.3 -4.9725 | opp_overlap 1616811 1616810 1616816 ATTTCTATATAAAAA GAACTAGCAAAGTCTAC AAT GTAAACTTCGCTAGTTC TTTTGCTTTTCATTT TERM 1821 1616899 - 1616911 + T 70 -6.3 -4.21351 | TTTCTTTAACCTTAT CTAGA ATA TCTAG TTTATTAACATCTTT SH1569 1618016 - 1616991 - | hypothetical protein SH1570 1619008 - 1618031 - | guanosine 5'-monophosphate oxidoreductase rpsN 1619424 - 1619155 - | 30S ribosomal protein S14 TERM 1822 1619450 - 1619462 + r 74 -6.3 -4.57353 | opp_overlap 1619449 1619450, overlap 1619445 CCTGTTTTTTTAAAT CGTAA TTA TTACG TTTTATATAATAACA TERM 1823 1619559 - 1619533 - R 100 -12.5 -6.01369 | TAAATAATAAAAAAA CCGAAGTATAA GATTA TTATACTTCGG CAAGCTCTAAGTTTA rpmG 1619754 - 1619605 - | 50S ribosomal protein L33 katA 1621358 - 1619847 - | catalase TERM 1824 1621085 - 1621100 + g 72 -6.2 -4.37527 | overlap 1621077 CTGTTGAGAAACGTG CAAACA TTTC TGTTTG TTTTCCTACTTCTGA TERM 1825 1621747 - 1621772 + G 71 -5.5 -4.58303 | TGCTTTACTTTTTAA TGTCGTCAATT GGTG AATTGGCAACA TTTTATCCTGTTTCA SH1574 1621572 - 1623026 + | gamma-aminobutyrate permease TERM 1826 1623083 - 1623031 - f 72 -6.7 -4.25231 | gap 2, opp_overlap 1623028 1623036, overlap 1623036 AAGAAAATTAAATAA TAAAATGCGAG-CACTAAAA-GTAT AGTAA ATCCTTTTTAGTGACTCGCATTTTT TTGTTTCAACATATT TERM 1827 1623078 - 1623036 - f 84 -6.6 -5.03961 | gap 2, opp_overlap 1623028 1623036, overlap 1623031 AATTAAATAATAAAA TGCGAG-CACTAAAA-GTAT AGTAA ATCCTTTTTAGTGACTCGCA TTTTTTTGTTTCAAC TERM 1828 1623036 - 1623078 + F 100 -6.6 -5.95539 | gap 2, opp_overlap 1623036 1623031, overlap 1623028 AATTAAATAATAAAA TGCGAG-CACTAAAA-GTAT AGTAA ATCCTTTTTAGTGACTCGCA TTTTTTTGTTTCAAC SH1575 1623167 - 1623481 + | hypothetical protein SH1576 1624372 - 1623569 - | hypothetical protein thrB 1625342 - 1624425 - | homoserine kinase TERM 1829 1625048 - 1625029 - G 76 -7.8 -3.97368 | TTTGCAATGTATAAA GCGCCTAC CAAT GCAGACGC CGATGAACCTAAACC thrC 1626406 - 1625345 - | threonine synthase TERM 1830 1625772 - 1625785 + g 70 -2.4 -5.32882 | opp_overlap 1625772 AAGCCAAATAATCGA GGTA ATTGAC TACC TTTTTTCTCATGGTA dhoM 1627689 - 1626412 - | homoserine dehydrogenase TERM 1831 1627837 - 1627862 + H 89 -7.8 -5.01732 | overlap 1627855 TATTATCATGTGGTA TCAGAAAATT AAATAG AATTTTCTGA TTTTTTAGAAAGGTT SH1580 1627888 - 1629270 + | aspartate kinase TERM 1832 1629278 - 1629331 + T 91 -10 -4.19414 | gap 1, opp_overlap 1629278, overlap 1629276 AAGCATAGTTAAAAA GCATCTAGTATTTAAGTAGTCATGT TTTGT ACATTCC-ACTTAAATATTAGATGC TTCTTTATAATTTGT TERM 1833 1629331 - 1629278 - T 100 -10 -4.72333 | gap 1, opp_overlap 1629276 1629278 AAGCATAGTTAAAAA GCATCTAGTATTTAAGTAGTCATGT TTTGT ACATT-CCACTTAAATATTAGATGC TTCTTTATAATTTGT SH1581 1629917 - 1629336 - | hypothetical protein TERM 1834 1629851 - 1629870 + g 70 -2.2 -5.36314 | CTTCCCCATGAAATT TGAATG AAGTACGA CATTCA TTTTTTAATATTTTA SH1582 1630203 - 1631060 + | hypothetical protein TERM 1835 1631070 - 1631118 + T 100 -12.8 -4.67353 | gap 1, opp_overlap 1631070 1631073 AATTAATTCATTAAG TAAGCGATTGACA-GTGAATC TACATACT GATACACGTGTCAATCGCTTA TTTTTAACTCCATAA TERM 1836 1631118 - 1631070 - T 100 -12.8 -2.53677 | gap 1, opp_overlap 1631070, overlap 1631073 AATTAATTCATTAAG TAAGCGATTGACA-GTGAATC TACATACT GATACACGTGTCAATCGCTTA TTTTTAACTCCATAA TERM 1837 1631115 - 1631073 - T 85 -10.1 -3.41581 | gap 1, opp_overlap 1631070, overlap 1631070 TAATTCATTAAGTAA GCGATTGACA-GTGAATC TACATACT GATACACGTGTCAATCGC TTATTTTTAACTCCA nuc 1631658 - 1631122 - | thermonuclease SH1584 1631826 - 1632017 + | hypothetical protein TERM 1838 1632109 - 1632057 - f 100 -12.3 -4.59773 | opp_overlap 1632058 1632059 1632060, overlap 1632060 TTTTACTTGCAAAAA TAATGGGAGTAAGACAAAGAATTCA AAC TGAATTTTTTATCTTACTCCCAACT TTTTTTATATTTAAG TERM 1839 1632058 - 1632108 + F 100 -13.6 -5.88197 | opp_overlap 1632057 1632060, overlap 1632059 1632060 TTTACTTGCAAAAAT AATGGGAGTAAGACAAAGAATTCA AAC TGAATTTTTTATCTTACTCCCAAC TTTTTTTATATTTAA TERM 1840 1632059 - 1632107 + F 100 -17.1 -4.10478 | opp_overlap 1632057 1632060, overlap 1632058 1632060 TTACTTGCAAAAATA ATGGGAGTAAGACAAAGAATTCA AAC TGAATTTTTTATCTTACTCCCAA CTTTTTTTATATTTA TERM 1841 1632106 - 1632060 - f 100 -20.6 -4.41633 | opp_overlap 1632060 1632059 1632058, overlap 1632057 TACTTGCAAAAATAA TGGGAGTAAGACAAAGAATTCA AAC TGAATTTTTTATCTTACTCCCA ACTTTTTTTATATTT TERM 1842 1632060 - 1632106 + F 100 -20.6 -3.03847 | opp_overlap 1632057 1632060, overlap 1632059 1632058 TACTTGCAAAAATAA TGGGAGTAAGACAAAGAATTCA AAC TGAATTTTTTATCTTACTCCCA ACTTTTTTTATATTT SH1585 1632257 - 1632436 + | hypothetical protein SH1586 1633192 - 1632590 - | hypothetical protein SH1587 1634286 - 1633189 - | hypothetical protein SH1588 1635024 - 1634287 - | hypothetical protein SH1589 1635894 - 1635028 - | hypothetical protein TERM 1843 1636019 - 1636049 + r 87 -11.4 -2.55763 | opp_overlap 1636019, overlap 1636018 1636016 CGAGGTAGCAAAAAA GAGATTAAGCAA CATTAAA TTGCTTAATCTC ATAATTTTTAACTAT TERM 1844 1636049 - 1636019 - R 100 -12.1 -5.1675 | opp_overlap 1636019 1636018 1636016 CGAGGTAGCAAAAAA GAGATTAAGCAAC ATTAA ATTGCTTAATCTC ATAATTTTTAACTAT SH1590 1637564 - 1636083 - | hypothetical protein SH1591 1637797 - 1637603 - | hypothetical protein SH1592 1638010 - 1639035 + | hypothetical protein TERM 1845 1639036 - 1639081 + T 100 -13.7 -3.0439 | gap 1, opp_overlap 1639047, overlap 1639047 TTAGAGTTAATTTAA CATCTGAAAAACAGGACTTCCT AAA AGGAAATCCTGTTTTTTA-ATG TAGTTTATAATAAAT TERM 1846 1639047 - 1639071 + T 100 -11.5 -5.2422 | opp_overlap 1639047, overlap 1639036 TTAACATCTGAAAAA CAGGACTTCCT AAA AGGAAATCCTG TTTTTTAATGTAGTT TERM 1847 1639071 - 1639047 - T 100 -13.7 -4.66953 | opp_overlap 1639036 1639047 TTAACATCTGAAAAA CAGGACTTCCT AAA AGGAAATCCTG TTTTTTAATGTAGTT SH1593 1639192 - 1639076 - | hypothetical protein SH1594 1639939 - 1639847 - | hypothetical protein SH1595 1640043 - 1639957 - | hypothetical protein TERM 1848 1640523 - 1640475 - R 84 -10.7 -2.72379 | opp_overlap 1640473 1640518, overlap 1640484 1640493 TCAACCCTGCAAGGA TGACTAGAACTGAGAAAA-GCTT GATTT AAGCGCCTTCTCAGTTC-AGTCA GCTACTGTGAATTTG SH1596 1640735 - 1640517 - | hypothetical protein TERM 1849 1640635 - 1640652 + g 72 -4.9 -4.76213 | TGAGATACTTCTTCT TGGGAAA ATGT TTTCTCA TTTTGTTGGATTTGT TERM 1850 1640840 - 1640821 - R 77 -5 -5.36441 | overlap 1640824 TTTGGACATAAAAAA TAACCTTC CGTA GAAGGTTG AAAAAGTGTATAAAA TERM 1851 1640837 - 1640824 - R 79 -6.7 -4.77122 | overlap 1640821 GGACATAAAAAATAA CCTTC CGTA GAAGG TTGAAAAAGTGTATA SH1597 1641090 - 1640896 - | hypothetical protein SH1598 1641446 - 1641087 - | hypothetical protein SH1599 1642293 - 1641541 - | hypothetical protein TERM 1852 1642607 - 1642633 + r 71 -8 -3.31461 | opp_overlap 1642607, overlap 1642610 TTCCAACACAAAAAA GAAGCTAAGGCA AGA TGCCTTAACTCC TTGTACCACTAAGTC TERM 1853 1642633 - 1642607 - R 100 -12.4 -5.47159 | opp_overlap 1642607 1642610 TTCCAACACAAAAAA GAAGCTAAGGCA AGA TGCCTTAACTCC TTGTACCACTAAGTC glnA 1644010 - 1642670 - | glutamine-ammonia ligase glnR 1644396 - 1644031 - | glutamine synthetase repressor TERM 1854 1644590 - 1644568 - R 95 -9.2 -5.00884 | opp_overlap 1644568 ACTTTTTTCAAAAAA TCCCTACTCA ACT CAAGTAGGGA TACATTTTCTATATC SH1602 1645837 - 1644599 - | hypothetical protein SH1603 1647095 - 1645857 - | hypothetical protein bsaA 1647205 - 1647681 + | glutathione peroxidase TERM 1855 1647743 - 1647705 - T 100 -13.5 -5.29716 | opp_overlap 1647705 TTAATACAATAAAAA GCTTCATTATAGAGT GAAATAGCA ACTCTATAATGAAGC TTTTTATATTACAAA TERM 1856 1647705 - 1647743 + T 100 -13.5 -5.0916 | opp_overlap 1647705 TTAATACAATAAAAA GCTTCATTATAGAGT GAAATAGCA ACTCTATAATGAAGC TTTTTATATTACAAA SH1605 1648116 - 1647874 - | hypothetical protein miaA 1649068 - 1648070 - | tRNA delta(2)-isopentenylpyrophosphate transferase SH1607 1650007 - 1649084 - | hypothetical protein TERM 1857 1650193 - 1650154 - R 100 -16.8 -5.26316 | gap 1, opp_overlap 1650152 1650184 TTATTTTATAAAAAA TGAACTGAGATGAGCTTCA TAT TAAAGCTC-TCTCAGTTCA GATATTAACTGCGAA glpD 1651973 - 1650300 - | aerobic glycerol-3-phosphate dehydrogenase TERM 1858 1652056 - 1652011 - R 100 -12.9 -5.05782 | gap 1 ATTTATGCGAAAAAA GAGAGACCTATC-CATACAG AATCAAA CTGTATGTAACAGGTCTCTC AAATCTCGACTGATG glpK 1653625 - 1652126 - | glycerol kinase TERM 1859 1653338 - 1653353 + g 70 -4 -4.83615 | AACAATTGCATGGTA TATTGG ACGT CCAGTA TTTTTATCCCAAATG tnp 1653840 - 1655012 + | transposase for IS256 aacAaphD 1656581 - 1655142 - | bifunctional aminoglycoside N-acetyltransferase and aminoglycoside phosphotransferase SH1612 1656974 - 1656582 - | acetyltransferase tnp 1658203 - 1657031 - | transposase for IS256 glpF 1659146 - 1658328 - | glycerol uptake facilitator glpP 1659906 - 1659373 - | glycerol uptake operon antiterminator regulatory protein TERM 1860 1659633 - 1659615 - G 77 -6.1 -4.6856 | opp_overlap 1659615 TAAACACCCTAAAAA TCGTTAA CTTAT TTAACGA TTTAGCCTTCTGAAT mutL 1661949 - 1659922 - | DNA mismatch repair protein MutL mutS 1664613 - 1661962 - | DNA mismatch repair protein TERM 1861 1663191 - 1663223 + g 72 -9.3 -2.63215 | opp_overlap 1663195, overlap 1663190 1663195 GTTTACGGTGATAGC CAAATTTACTAGGTT CAA ATCCTTGTAAATTTG CTCTTGTAATTTCTA SH1618 1665371 - 1664880 - | hypothetical protein SH1619 1665758 - 1665393 - | hypothetical protein SH1620 1667303 - 1665759 - | hypothetical protein TERM 1862 1667067 - 1667083 + g 77 -5.1 -5.07486 | AGTATCATGTGCATT CATTTGG CAG CCATATG TTTTTATTAAGAATG SH1621 1667898 - 1667602 - | hypothetical protein SH1622 1668570 - 1667959 - | hypothetical protein TERM 1863 1668784 - 1668752 - R 100 -10.1 -5.97575 | AAGTTATAAAAAAAA CTCACTTCAAAAC TTAAAGC GTTTTAAAGTGAG CTCCTACAATTTCTA SH1623 1669663 - 1668797 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta SH1624 1671424 - 1669664 - | hypothetical protein SH1625 1672353 - 1671559 - | hypothetical protein SH1626 1672512 - 1672727 + | hypothetical protein TERM 1864 1672860 - 1672898 + T 95 -8.5 -5.14563 | gap 2, opp_overlap 1672871 CTAATCATCTATTTG GAGTGAGACTATGAATTCG TAA TGAATTCA-A-TCTCACTC TTTTTTAATGACAAC TERM 1865 1672991 - 1672971 - T 100 -10.5 -5.80951 | opp_overlap 1672973 ACTGAAAAGAAAAAA CAGACCCAA AAT TTGGATCTG TTAAAAATTATTTCG SH1627 1674558 - 1672999 - | phosphodiesterase recA 1675991 - 1674945 - | recombinase A cinA 1677309 - 1676167 - | competence-damage inducible protein cinA pgsA 1678039 - 1677464 - | phosphatidylglycerophosphate synthase SH1631 1678465 - 1678073 - | hypothetical protein SH1632 1679224 - 1678487 - | hypothetical protein TERM 1866 1678987 - 1679007 + g 80 -2.5 -5.67063 | opp_overlap 1678987 CCAATAAACCTAAAT CTTCACGTT CAA AACGAAAAG TTTTTTTATCATCGG SH1633 1680194 - 1679490 - | hypothetical protein SH1634 1681483 - 1680194 - | hypothetical protein SH1635 1682757 - 1681483 - | hypothetical protein SH1636 1683499 - 1682783 - | hypothetical protein SH1637 1685920 - 1683503 - | hypothetical protein TERM 1867 1685324 - 1685334 + g 71 -5.4 -4.48221 | TGATGCACTTTGACT TGAG TTT CTCA TTTTATCAATTGATG SH1638 1687829 - 1686156 - | hypothetical protein TERM 1868 1687787 - 1687809 + g 91 -4.2 -5.81412 | CGACACCACCAAGTG GAATGATG CGAATAT CGTCATTC TTTTTTTTCACTAAA TERM 1869 1688027 - 1688004 - R 95 -9 -4.84642 | gap 1, opp_overlap 1687999 1688006 TGTAAACTAATAAAA GACTAGGATGA TAA TC-TCCTAGTC TTAAAATTATTATTT pnpA 1690139 - 1688037 - | polynucleotide phosphorylase/polyadenylase TERM 1870 1690230 - 1690258 + r 79 -9.7 -3.22777 | opp_overlap 1690230, overlap 1690228 1690235 TAAACGATAAAAAAA GGAAAGTACCA AACTAAA TGGTGCTTTCC TCTTAATATATAAAA TERM 1871 1690258 - 1690230 - R 100 -7.5 -5.75599 | opp_overlap 1690228 1690230 1690235 TAAACGATAAAAAAA GGAAAGTACCA AACTAAA TGGTGCTTTCC TCTTAATATATAAAA rpsO 1690544 - 1690275 - | 30S ribosomal protein S15 ribC 1691629 - 1690658 - | riboflavin kinase / FAD synthase ribC truB 1692561 - 1691644 - | tRNA pseudouridine 5S synthase TERM 1872 1692471 - 1692485 + g 73 -3.6 -5.13741 | CAGTATGACCTATTT TCTTAG TTT TTAAGA TTTTTCTTAGCTTAA TERM 1873 1692746 - 1692708 - H 79 -4.9 -5.47399 | gap 2, opp_overlap 1692716, overlap 1692716 1692717 TTAATTTTAAAAAAA GAGTAGAAC--TGAAATTA TAC TAATTTCAATGTCCTACCC CTTAACTATTTAGTA TERM 1874 1692811 - 1692782 - H 100 -13.8 -4.30719 | opp_overlap 1692782 GGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTTATGTTTTTGA TERM 1875 1692782 - 1692811 + H 100 -13.8 -5.36364 | opp_overlap 1692782 GGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTTATGTTTTTGA TERM 1876 1693252 - 1693236 - g 73 -4.5 -4.88918 | TTATTTCAAATAAAA CAAAACT TGC AGTTTTA AATAAAGCACAAGAA TERM 1877 1694219 - 1694189 - g 100 -16.4 -5.95946 | opp_overlap 1694187 1694197 1694198 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTAGGACTCAT tnp 1692899 - 1694215 + | transposase for ISSha1 rbfA 1694637 - 1694287 - | ribosome-binding factor A TERM 1878 1694778 - 1694754 - R 90 -8.6 -4.68593 | TTTATCATTTAAAAA GGTGGACG GTTTCTCCA CGTCCACC TATACATATATTGTT infB 1696949 - 1694799 - | translation initiation factor IF-2 SH1646 1697271 - 1696954 - | hypothetical protein SH1647 1697552 - 1697268 - | hypothetical protein nusA 1698810 - 1697578 - | transcription elongation factor NusA SH1649 1699298 - 1698831 - | hypothetical protein TERM 1879 1699347 - 1699328 - R 81 -7.1 -4.78848 | opp_overlap 1699328 TCGGCAAATAGAAAA GAGCGGG TATATG CCCACTC TTTCTGCCTGAGTCT polC 1703783 - 1699467 - | DNA polymerase III PolC TERM 1880 1702087 - 1702116 + g 70 -4.3 -4.65895 | overlap 1702068 1702088 GTATCATAAATAGCT CTATGGTGTTGAG TTAA TTCTACACCATAC TTTTTCGCTAAAAAG TERM 1881 1702919 - 1702941 + g 76 -2.9 -5.55769 | gap 1, opp_overlap 1702924, overlap 1702924 CTACACTTAGTGCCT TAAAG-TGAT CTAA ATCATCTTTA TTTTTTCTTGTAAAC TERM 1882 1703930 - 1703963 + r 77 -9.7 -2.81291 | opp_overlap 1703930, overlap 1703929 1703932 TTTTTAGTAAAAAAA GAGGTTTAGACAAAT ATGA AATTGTCTTAACCTC ATTTAGCATTATGCA TERM 1883 1703963 - 1703930 - R 100 -9.7 -5.52384 | opp_overlap 1703930 1703929 1703932 TTTTTAGTAAAAAAA GAGGTTTAGACAAAT ATGA AATTGTCTTAACCTC ATTTAGCATTATGCA proS 1705744 - 1704044 - | prolyl-tRNA synthetase SH1652 1707049 - 1705763 - | hypothetical protein cdsA 1708042 - 1707260 - | phosphatidate cytidylyltransferase TERM 1884 1708083 - 1708061 - R 73 -8.4 -3.05816 | opp_overlap 1708060 1708061 CTACTCCTTACTTAA CCCTCCAAAG CGT CTTTGGCGAG ATTGATATATTTTTA uppS 1708816 - 1708046 - | undecaprenyl pyrophosphatase synthetase TERM 1885 1708951 - 1708926 - R 82 -5.5 -5.41359 | opp_overlap 1708926, overlap 1708936 AAGCAAATGAAAAAA CTGTACCAA AGTCTGAA TTGGCACAG TTTAGACTAAAATAA TERM 1886 1709049 - 1709059 + r 82 -5.4 -5.40464 | opp_overlap 1709047 1709049 CGAACTAATTAAACA GACA TAA TGTC TTTTTCTTTGTCCTC frr 1709596 - 1709042 - | ribosome recycling factor smbA 1710336 - 1709614 - | uridylate kinase tsf 1711351 - 1710473 - | elongation factor Ts TERM 1887 1711044 - 1711068 + g 71 -5.2 -4.47786 | gap 1 TCTACTGTTTCAGCT TTGCT-ATCAA GAAC TTGATTAGCAA TTTCTTTAACTAATT TERM 1888 1711494 - 1711467 - R 95 -8.6 -5.06451 | gap 1, opp_overlap 1711467 1711466 TATTATTTGAAAAAA GGGCGATAAGCAT TAC AT-CTTATCACCC ATTTAAACTATATCT rpsB 1712297 - 1711509 - | 30S ribosomal protein S2 TERM 1889 1712124 - 1712150 + g 71 -3 -5.19916 | overlap 1712125 ATCTTCAGATACTTG TTTGATGAAGTT ATA AGCTTCTTCAAC TTTTTTCACTGTTTT TERM 1890 1712525 - 1712497 - R 89 -7.6 -5.18726 | opp_overlap 1712497 1712520 TTTTCATAATAAAAA CTGTTACAAATA ATATA TACTTGCAACAG TTGAATGTTGGTTAT codY 1713337 - 1712564 - | transcriptional repressor CodY hslU 1714762 - 1713359 - | ATP-dependent protease ATP-binding subunit clpQ 1715366 - 1714821 - | ATP-dependent protease peptidase subunit xerC 1716260 - 1715367 - | hypothetical protein TERM 1891 1716309 - 1716268 - R 70 -4.7 -4.65895 | gap 2 TCTTCCACTTAAAAA TCCCCTCCA--TCATATGC ATTGTA GCATATAACATGAAGGGGA CTAAAATAATTAGCT gid 1717712 - 1716405 - | tRNA (uracil-5-)-methyltransferase Gid topA 1719805 - 1717736 - | DNA topoisomerase I TERM 1892 1717896 - 1717907 + g 71 -3 -5.17507 | opp_overlap 1717896, overlap 1717898 TAGTTTGAACAACCA TAGA AAAG TCTA TTTTTCTTAGATTTT TERM 1893 1718373 - 1718391 + g 77 -6 -4.69664 | overlap 1718375 TCAATCGTAGGTGCA TAGGTAGA CGG TCTACCGA TTTTTAACTCCTCTA TERM 1894 1718499 - 1718515 + g 76 -4.5 -5.098 | GTGACTTCATCACCT TTACTTA AGT TAGGTAA TTTATTTTCTTTTTC SH1665 1720850 - 1719984 - | hypothetical protein TERM 1895 1721024 - 1721002 - R 91 -7 -5.33026 | opp_overlap 1721002 CAATTCAAACAAAAA TCTGAGACCC TTA AAGCCTCAGA ATTTTTTATATTATA fmhC 1722298 - 1721069 - | FmhC protein TERM 1896 1722068 - 1722044 - G 74 -3 -5.27335 | TTTTTTAAAGAAAAA TTCTACTAAC GCTAA ATTAGTAAAA TCCATCACTGGTCCT sucD 1723503 - 1722598 - | succinyl-CoA synthetase subunit alpha TERM 1897 1723133 - 1723154 + g 74 -3.1 -5.2204 | gap 1, overlap 1723135 GTAATAACACCTGGG CA-GTTTGGT CCA ACTAAACGTG TTTTTCTTCCTTCTA sucC 1724691 - 1723525 - | succinyl-CoA synthetase subunit beta rnhB 1725570 - 1724803 - | ribonuclease HII rbgA 1726438 - 1725554 - | ribosomal biogenesis GTPase TERM 1898 1728871 - 1728886 + G 71 -5.4 -4.59081 | TATCACTATTACCCT TTCGCC TGAT GGTGAA TTTTATGTCGATTTA TERM 1899 1729060 - 1729039 - g 78 -7.4 -4.16842 | TGTAGCCTCAATAAA CATTCCTT ATCGAA AAGGAATG CAAGCGTATGTTGAT SH1671 1726676 - 1729270 + | hypothetical protein TERM 1900 1730329 - 1730343 + G 70 -4.2 -4.71791 | overlap 1730331 ATGGATTCTCATTAC CACAAC GAC GTTGGG TTTATTTCTTAGTGT SH1672 1729272 - 1731881 + | hypothetical protein TERM 1901 1731983 - 1731933 - T 100 -9.3 -5.11112 | gap 1, opp_overlap 1731936 1731940, overlap 1731936 AAATGTGAATAAAAA TAATAAAGCTTCCAATC-TCAACT TGAA AGAAGAAGATTGGAAGCTTTATTT GTAAGACAAACGTTG TERM 1902 1731980 - 1731936 - T 100 -11 -4.63592 | gap 1, opp_overlap 1731936 1731940, overlap 1731933 TGTGAATAAAAATAA TAAAGCTTCCAATC-TCAACT TGAA AGAAGAAGATTGGAAGCTTTA TTTGTAAGACAAACG TERM 1903 1731936 - 1731980 + T 93 -11 -3.85698 | gap 1, opp_overlap 1731936 1731933, overlap 1731940 TGTGAATAAAAATAA TAAAGCTTCCAATC-TCAACT TGAA AGAAGAAGATTGGAAGCTTTA TTTGTAAGACAAACG TERM 1904 1731940 - 1731976 + T 78 -7.4 -4.55295 | gap 1, opp_overlap 1731936 1731933, overlap 1731936 AATAAAAATAATAAA GCTTCCAATC-TCAACT TGAA AGAAGAAGATTGGAAGC TTTATTTGTAAGACA rplS 1732388 - 1732038 - | 50S ribosomal protein L19 TERM 1905 1732514 - 1732531 + r 75 -5.7 -4.8083 | GTTTTTCAATTGCTT TTTATAG CTTT CTATAAA TTTTTCATCGTCTTC trmD 1733230 - 1732493 - | tRNA-mehtyltransferase rimM 1733733 - 1733230 - | 16S rRNA processing protein TERM 1906 1733800 - 1733822 + r 79 -9.1 -3.38638 | opp_overlap 1733802, overlap 1733798 1733795 1733802 TTTTCAGTATTTAAA AAGGCGCCA TCAGT TGGCGCCTC TATTACTTTACTTAT TERM 1907 1733820 - 1733802 - R 100 -11.7 -4.68593 | opp_overlap 1733802 1733800 1733798 1733795 TTCAGTATTTAAAAA GGCGCCA TCAGT TGGCGCC TCTATTACTTTACTT TERM 1908 1733802 - 1733820 + r 95 -11.7 -3.24804 | opp_overlap 1733802, overlap 1733800 1733798 1733795 TTCAGTATTTAAAAA GGCGCCA TCAGT TGGCGCC TCTATTACTTTACTT rpsP 1734127 - 1733852 - | 30S ribosomal protein S16 TERM 1909 1734221 - 1734254 + r 100 -13.5 -3.34236 | gap 1, opp_overlap 1734226 1734230, overlap 1734226 1734253 AGACTTTTTTCTTTA CCAAATCTA-GGTTTT TTT AAAACCGTAGATTTGG TTATGGACTAGCTTT TERM 1910 1734253 - 1734283 + r 74 -6.9 -4.31412 | gap 1, overlap 1734221 TAAAACCGTAGATTT GGTTATGGACTAGC TTTA GCTAGGCCG-AACC TTTTGCTAAATGTTT TERM 1911 1734368 - 1734327 - R 74 -8.3 -3.6761 | opp_overlap 1734327 1734333, overlap 1734333 TTTTTTCAATAAACA TCAAAATATCGAACACT ATTTGAGA AGCGTTCGATATTTTCA CTTAATTAAAATGGT TERM 1912 1734362 - 1734333 - R 78 -7.3 -4.55446 | opp_overlap 1734333 1734327, overlap 1734327 CAATAAACATCAAAA TATCGAACACT ATTTGAGA AGCGTTCGATA TTTTCACTTAATTAA ffh 1735744 - 1734374 - | hypothetical protein SH1678 1736102 - 1735770 - | hypothetical protein TERM 1913 1736059 - 1736040 - G 73 -8 -3.67597 | TTTTTCAGTTAATAA TGTTTGAT AAAA ATCAAACA AATAATTCATTCGCA SH1679 1737312 - 1736089 - | hypothetical protein smc 1740878 - 1737309 - | chromosome segregation SMC protein rnc 1741700 - 1740963 - | ribonuclease III TERM 1914 1741776 - 1741750 - R 100 -12.4 -5.7946 | opp_overlap 1741748 TTCTTAAGAAAAAAA TCTGAGCCATCT TGT AGACGACTCAGA TGTAAGTTTTTATTT hmrB 1742019 - 1741786 - | acyl carrier proteins/high methicillin resistance- related protein HmrB fabG 1742869 - 1742132 - | 3-oxoacyl-(acyl-carrier protein) reductase fabD 1743788 - 1742859 - | malonyl CoA-acyl carrier protein transacylase TERM 1915 1743154 - 1743164 + g 74 -5.4 -4.68424 | opp_overlap 1743154 AATTGATTAATGAAA GACT CAA AGTC TTTTTCAATCACTTG plsX 1744767 - 1743781 - | putative glycerol-3-phosphate acyltransferase PlsX SH1686 1745329 - 1744769 - | fatty acid biosynthesis transcriptional regulator recG 1747516 - 1745465 - | ATP-dependent DNA helicase SH1688 1748471 - 1747671 - | hypothetical protein TERM 1916 1748530 - 1748546 + r 80 -5.3 -5.28983 | opp_overlap 1748530 TATCATAAAAAATAC TATTAAA ATT TTTAATA TTTTTATCTTTTAAA TERM 1917 1748602 - 1748643 + r 100 -13.3 -4.15508 | opp_overlap 1748602 GCTCCATATGAAAAA TAGCTATGAAGCATTCTAT AGTC ATAGATTACTTCATAGCTA TTTTAGAAATTAGTT TERM 1918 1748643 - 1748602 - R 100 -15.5 -4.8048 | opp_overlap 1748602 GCTCCATATGAAAAA TAGCTATGAAGCATTCTAT AGTC ATAGATTACTTCATAGCTA TTTTAGAAATTAGTT SH1689 1750315 - 1748657 - | hypothetical protein TERM 1919 1749304 - 1749315 + g 76 -4.4 -5.03201 | AAATCGCGATAATGG CAGT CTCA ACTG TTTTTGATTCTTCTT TERM 1920 1749333 - 1749347 + g 75 -7.2 -4.25088 | overlap 1749328 TTTGATTCTTCTTGC TCATCA GAA TGATGA TTTAGTTTCTCTTTT SH1690 1750704 - 1750336 - | hypothetical protein TERM 1921 1750500 - 1750513 + g 79 -5.3 -5.18643 | TATACATATCTATAT CAATG ACAC CATTG TTTTCTTTTACTTCA rpmB 1750987 - 1751175 + | 50S ribosomal protein L28 TERM 1922 1751229 - 1751186 - T 76 -9.2 -2.97382 | gap 1, opp_overlap 1751186 1751197, overlap 1751197 TTTAATAAATATAAT GCACTAAAAAATGCCTTCA TATGTGG TGAAGGCATTTTTTT-TGC TTAATTTTAATTTGC TERM 1923 1751186 - 1751229 + T 89 -9.9 -3.78998 | gap 1, opp_overlap 1751186 1751197, overlap 1751197 TTTAATAAATATAAT GCACTAAAAAATGCCTTCAT ATGTG GTGAAGGCATTTTTTT-TGC TTAATTTTAATTTGC TERM 1924 1751197 - 1751219 + T 100 -8.5 -5.96521 | opp_overlap 1751186 1751197, overlap 1751186 TAATGCACTAAAAAA TGCCTTCAT ATGTG GTGAAGGCA TTTTTTTTGCTTAAT TERM 1925 1751219 - 1751197 - T 89 -7.8 -5.18357 | opp_overlap 1751197 1751186, overlap 1751186 TAATGCACTAAAAAA TGCCTTCA TATGTGG TGAAGGCA TTTTTTTTGCTTAAT SH1692 1751877 - 1751236 - | hypothetical protein cfxE 1752529 - 1751885 - | ribulose-5-phosphate 3-epimerase SH1694 1753404 - 1752529 - | hypothetical protein TERM 1926 1753557 - 1753596 + r 85 -10.2 -3.3323 | gap 1, opp_overlap 1753557 TTTTTTACTAAGAAA CCCTTTTAGCGAATGTGCA TTA TTC-CATTCACTAAAAGGG TTAAATTTAATATTC TERM 1927 1753596 - 1753557 - R 100 -12.4 -4.24342 | gap 1, opp_overlap 1753557 TTTTTTACTAAGAAA CCCTTTTAGCGAATGTGCA TTA TTC-CATTCACTAAAAGGG TTAAATTTAATATTC SH1695 1755630 - 1753603 - | hypothetical protein TERM 1928 1753871 - 1753890 + g 72 -5.8 -4.28371 | opp_overlap 1753871, overlap 1753859 1753865 TTGTCTTCACTAGAA GATTTAGA TTTC TCTGAATC TTTGTCTTCATCTTT TERM 1929 1753899 - 1753913 + g 88 -7.2 -5.0925 | overlap 1753895 1753907 CTGAATCTTTGTCTT CATCTT TTG AAGATG TTTTTCCTTTTGAAA TERM 1930 1754686 - 1754702 + g 71 -3 -5.06961 | ATTAACAATCGGTAT TTGCAT CGTTT GTGCAA TTTGTTTTTGTTCAT TERM 1931 1755466 - 1755483 + g 71 -5.6 -4.56187 | overlap 1755461 GTTAACTTCTCGTTC GAAACG CTTCAT CGTTTC TTCTTTTTCATTCTG SH1696 1756370 - 1755627 - | hypothetical protein TERM 1932 1756187 - 1756205 + g 73 -9 -3.18264 | opp_overlap 1756180 CTATAAAATTCTCAT CTTCAAAA CGT TTTTGAAG TTCATAAGTAACAAA SH1697 1757470 - 1756376 - | hypothetical protein TERM 1933 1756983 - 1756993 + g 74 -5.4 -4.66953 | ACACGTTCATCCGTT GCAT CTA ATGC TTTTTGAACTGTTAA SH1698 1758779 - 1757472 - | hypothetical protein TERM 1934 1757683 - 1757669 - G 71 -6.4 -4.16842 | opp_overlap 1757669 TGCATGTTGAATAAA CTAGTG TAC CACCAG GTTTCAAGTTATCTT fmt 1759714 - 1758776 - | methionyl-tRNA formyltransferase SH1700 1760189 - 1759701 - | hypothetical protein SH1701 1760367 - 1760570 + | hypothetical protein TERM 1935 1760579 - 1760628 + T 82 -6.2 -5.17576 | gap 3, opp_overlap 1760582, overlap 1760582 AATGTAATTAAAGTA AAAGAGTTACGCAA-T-TTAG-GAT TCC ATCTCTAATAATTGCGTAACTCTTA TTTTTTACATTAATA TERM 1936 1760625 - 1760582 - T 80 -7.9 -4.62054 | gap 3, opp_overlap 1760582 1760579 GTAATTAAAGTAAAA GAGTTACGCAA-T-TTAG-GAT TCC ATCTCTAATAATTGCGTAACTC TTATTTTTTACATTA TERM 1937 1760582 - 1760625 + T 83 -7.9 -4.67173 | gap 3, opp_overlap 1760582, overlap 1760579 GTAATTAAAGTAAAA GAGTTACGCAA-T-TTAG-GAT TCC ATCTCTAATAATTGCGTAACTC TTATTTTTTACATTA priA 1763041 - 1760633 - | primosomal protein TERM 1938 1762502 - 1762515 + g 74 -3.1 -5.32396 | TCCATCTATAATACG TACAG CTTT CTGTG TTTTCTTTTTAATGT SH1703 1764240 - 1763041 - | hypothetical protein TERM 1939 1763076 - 1763091 + g 73 -4 -5.15381 | ATTCATCTAAAATTT GTTCAG CTAA TTGAAC TTTTTTGCCTCTCTT SH1704 1764615 - 1764403 - | DNA-directed RNA polymerase subunit omega chain SH1705 1765238 - 1764615 - | hypothetical protein TERM 1940 1766264 - 1766249 - g 79 -9 -3.81488 | CGTGGTGAAAGAGAA CGCGTT AAAC AACGCG CAAATGATTTAGTTC TERM 1941 1766552 - 1766541 - g 72 -5.8 -4.28762 | opp_overlap 1766551, overlap 1766531 ATAATCGTATGAAAA CACG TGAA CGTG AATTAGACCATCAAA TERM 1942 1766910 - 1766924 + G 71 -8.6 -3.0353 | opp_overlap 1766909, overlap 1766909 1766912 AAACGATTAAAGAGG CAGCTA TGT TAGCTG GTTATTTCTCAAAAG SH1706 1765397 - 1767094 + | hypothetical protein TERM 1943 1767166 - 1767123 - T 100 -20 -5.25699 | opp_overlap 1767123 ACTATATAATAAAAA TAGGATTAGAACCAAATGCA TTTA TACATTCGGTTCTAATCCTA TTTTTTTATTTTTCA TERM 1944 1767123 - 1767166 + T 100 -15.6 -6.20267 | opp_overlap 1767123 ACTATATAATAAAAA TAGGATTAGAACCAAATGCA TTTA TACATTCGGTTCTAATCCTA TTTTTTTATTTTTCA SH1707 1767576 - 1767172 - | hypothetical protein TERM 1945 1767862 - 1767850 - R 83 -4.8 -5.72622 | TTTATAAACAAAAAA CGTG GTATA CACG ACTACTTTTTAACTA SH1708 1768143 - 1767913 - | hypothetical protein TERM 1946 1768004 - 1768016 + g 71 -6.3 -4.10566 | ATACTCACTTTTGAC TGAGT TCC ACTCA TTTCTCTAATACTAT pyrE 1768779 - 1768171 - | orotate phosphoribosyltransferase pyrF 1769473 - 1768781 - | orotidine-5-phosphate decarboxylase carB 1772743 - 1769570 - | carbamoyl phosphate synthase large subunit pyrAA 1773836 - 1772736 - | carbamoyl phosphate synthase small subunit TERM 1947 1773207 - 1773186 - G 75 -8.7 -3.34222 | AGGACCATTTGATAA CATGACACC ATCT GGTGACATG GCTAATATTTCTTCA pyrC 1775111 - 1773837 - | dihydroorotase pyrB 1776008 - 1775115 - | aspartate carbamoyltransferase catalytic subunit pyrP 1777351 - 1776041 - | uracil permease TERM 1948 1776130 - 1776145 + g 72 -6.2 -4.30014 | overlap 1776117 TACCTTCGATTTGAA GGTTTA CACC TAAACC TTTTAAATTAATGAG TERM 1949 1777405 - 1777377 - R 100 -8.4 -5.60993 | gap 1 CCTCTCATAAAAAAA GTCTCTTTTACAT TTAA ATGTAAA-GAGAC TAAAAAATCGTAGCA pyrR 1778111 - 1777584 - | pyrimidine regulatory protein PyrR TERM 1950 1777818 - 1777802 - G 74 -9.5 -3.00946 | opp_overlap 1777799, overlap 1777799 TTCCTGTATAAAGTA CATCATC AAT GATGATG ACTACCTTATCGTTA TERM 1951 1777942 - 1777954 + g 72 -4.9 -4.76963 | GGAACTATTTTTTGT TCAAT TTG ATTGA TTTTGTCTTGTATAC TERM 1952 1778164 - 1778136 - R 100 -16.9 -5.0925 | opp_overlap 1778133 TCTTAAAATTAAAAA CCCTCATGCCTTT TTC AAAGACATGAGGG CAAATTTATATACGC TERM 1953 1778539 - 1778510 - R 71 -2.8 -5.42265 | overlap 1778512 TGAAATTAGAAAAAA CACCCACAAAGC GTTGAA ACTTTGCGGGCT ACCAAACTATTCTTT TERM 1954 1778537 - 1778512 - R 78 -7.6 -4.32919 | overlap 1778510 AAATTAGAAAAAACA CCCACAAAGC GTTGAA ACTTTGCGGG CTACCAAACTATTCT SH1717 1779474 - 1778557 - | hypothetical protein lsp 1779962 - 1779486 - | lipoprotein signal peptidase (prolipoprotein signal peptidase) TERM 1955 1780074 - 1780035 - R 88 -5.2 -5.71712 | opp_overlap 1780036, overlap 1780036 CTCTATATAAAAAAA GCTACAGTTACAAATA GATGATGA TATTAGTAACTGTAGT TCATTATGCGTTTTC TERM 1956 1780073 - 1780036 - R 80 -8.7 -4.01943 | opp_overlap 1780036, overlap 1780035 TCTATATAAAAAAAG CTACAGTTACAAATA GATGATGA TATTAGTAACTGTAG TTCATTATGCGTTTT TERM 1957 1780036 - 1780073 + r 75 -8.7 -3.49076 | opp_overlap 1780036 1780035 TCTATATAAAAAAAG CTACAGTTACAAATA GATGATGA TATTAGTAACTGTAG TTCATTATGCGTTTT SH1719 1780557 - 1780078 - | hypothetical protein SH1720 1781356 - 1780562 - | hypothetical protein TERM 1958 1781323 - 1781341 + g 71 -6.8 -4.18197 | overlap 1781340 CATTTATAGTTATAC CATTTACA AAA TGTGAATG TTTTGAATGAAACAT TERM 1959 1781725 - 1781682 - R 100 -7.1 -5.88197 | gap 1, opp_overlap 1781687, overlap 1781687 1781689 TCAAACATAAAAAAA GA-AAAGGCAATTTCTATAA TATAT TCATAGAAATTGTCTTTCTC TCACTAATTCTAAAG TERM 1960 1781719 - 1781687 - R 100 -7.2 -5.61277 | opp_overlap 1781687, overlap 1781682 1781689 CATAAAAAAAGAAAA GGCAATTTCTATAA TATAT TCATAGAAATTGTC TTTCTCTCACTAATT TERM 1961 1781687 - 1781719 + r 75 -7.2 -4.07526 | opp_overlap 1781682 1781687 1781689 CATAAAAAAAGAAAA GGCAATTTCTATAA TATAT TCATAGAAATTGTC TTTCTCTCACTAATT TERM 1962 1781717 - 1781689 - R 71 -8.4 -2.92203 | opp_overlap 1781687, overlap 1781687 1781682 TAAAAAAAGAAAAGG CAATTTCTATAA TATAT TCATAGAAATTG TCTTTCTCTCACTAA SH1721 1783298 - 1781793 - | hypothetical protein TERM 1963 1783477 - 1783435 - R 76 -4.4 -5.19879 | gap 2 TTGTAAATACAAAAA GAGAGTCGGAC-A-GAATTC TTCTC AAATTCGTTGTCCAACTCCC AACTTGCTTTGCTTG ileS 1786407 - 1783657 - | isoleucyl-tRNA synthetase TERM 1964 1786447 - 1786435 - R 72 -6.3 -4.35524 | TCCTTAAATGTAAAA GAACT CTA AGTTC AATTAAAAAGGGACG SH1723 1787324 - 1786632 - | hypothetical protein TERM 1965 1787259 - 1787271 + g 83 -6.3 -4.89729 | ATCACTTACTTCAGC TGGTT CTA AACCA TTTTTCACTTTTGTA SH1724 1788194 - 1787367 - | hypothetical protein TERM 1966 1788176 - 1788192 + g 80 -10.9 -2.53249 | opp_overlap 1788176, overlap 1788175 1788171 1788178 AATTAAATGATAAAA GAGGTTG AAA CAACCTC ATGTATTGTCTCAGC TERM 1967 1788192 - 1788176 - G 100 -10.9 -4.64076 | opp_overlap 1788176 1788175 1788171 1788178 AATTAAATGATAAAA GAGGTTG AAA CAACCTC ATGTATTGTCTCAGC SH1725 1788518 - 1788228 - | hypothetical protein SH1726 1789124 - 1788531 - | hypothetical protein TERM 1968 1789109 - 1789099 - G 80 -2.6 -5.67063 | opp_overlap 1789099, overlap 1789100 TCCATTAGAAAAAAA TTAT TAA ATAA ATCTTTAATAGCCAC SH1727 1789804 - 1789136 - | hypothetical protein TERM 1969 1789890 - 1789905 + r 70 -4.8 -4.64766 | TATTATTTATATGAC TAATCT AATG AGATTA TTTTTGGCCTATAAA SH1728 1790694 - 1789903 - | hypothetical protein TERM 1970 1790857 - 1790814 - R 88 -5.5 -5.74086 | gap 2 AAAGTAAATAAAAAA GGGAG-AGAAC-ATGAATCCA CAAG TGAATTCGCCGTTCTACTCCC AATTAGGAATGATTA ftsZ 1792108 - 1790927 - | cell division protein FtsZ ftsA 1793571 - 1792138 - | cell division protein FtsA SH1731 1795003 - 1793675 - | hypothetical protein murD 1796368 - 1795019 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 1797335 - 1796370 - | phospho-N-muramic acid-pentapeptide translocase pbpA 1799946 - 1797628 - | penicillin-binding protein 1 TERM 1971 1798639 - 1798627 - G 77 -4.8 -5.14563 | CCCTTTATTAAAAAA GGCA GATTG TGCC TGAATCATTTGTACC TERM 1972 1799234 - 1799250 + g 73 -3.7 -5.1971 | opp_overlap 1799234 GTTAAATGAACATCA TCACC ACGTTTA GGTGA TTTTTCATTTTTAGT ftsL 1800328 - 1799927 - | cell division protein FtsL SH1736 1801277 - 1800342 - | hypothetical protein SH1737 1801723 - 1801292 - | cell division protein MraZ TERM 1973 1801440 - 1801458 + g 80 -10.4 -3.13899 | overlap 1801439 GTTAAACTAGCGTAC TTCCTCAA ATT TTGAGGAA TGTTAATACGCCCTT TERM 1974 1801848 - 1801822 - R 100 -11.8 -5.71712 | TTTTATACAAAAAAA CCTATTTTATCA TTT CGATAAAATAGG TCTAAAGCTTGATTT SH1738 1803478 - 1801865 - | hypothetical protein SH1739 1803669 - 1804112 + | hypothetical protein TERM 1975 1804135 - 1804175 + T 70 -7.7 -3.39483 | opp_overlap 1804132 1804133 1804136, overlap 1804134 1804136 GAATATGGAAAAGCT ATGGAGTGATAAAAGTTCT ATC AGAATCTTTACCACTCCAA CTTTTTGCATAAAAT TERM 1976 1804136 - 1804174 + T 87 -11.2 -2.63208 | opp_overlap 1804132 1804133 1804136, overlap 1804135 1804134 AATATGGAAAAGCTA TGGAGTGATAAAAGTTCT ATC AGAATCTTTACCACTCCA ACTTTTTGCATAAAA TERM 1977 1804174 - 1804136 - T 100 -13.4 -2.77519 | opp_overlap 1804136 1804135 1804134, overlap 1804132 1804133 AATATGGAAAAGCTA TGGAGTGATAAAAGTTCT ATC AGAATCTTTACCACTCCA ACTTTTTGCATAAAA SH1740 1804887 - 1804195 - | hypothetical protein TERM 1978 1804976 - 1804955 - R 100 -12.3 -5.75822 | TATAAATCAAAAAAA GACCAGAGC GCTT GCCCTGGTC CATGATAATTAGAAT SH1741 1805132 - 1804998 - | hypothetical protein SH1742 1805330 - 1805196 - | hypothetical protein SH1743 1805521 - 1805387 - | hypothetical protein SH1744 1805710 - 1805576 - | hypothetical protein SH1745 1805904 - 1805770 - | hypothetical protein TERM 1979 1806842 - 1806863 + r 100 -10.9 -5.60556 | opp_overlap 1806845 ATATTTTTAGGTTGA GAACGCTGT TATG ACGGCGTTC TTTTTATTTTGTCTT TERM 1980 1806967 - 1806946 - R 93 -4.4 -5.95539 | CCCTAAATAAAAAAA CCACACTC GATTAA GAACGTGG TTTAAGTAGTTAAGA TERM 1981 1807063 - 1807038 - R 100 -12 -5.84432 | TATAACATAAAAAAA TAACCGTACC TTAATT GGTACGGTTA AAATAAATCATTCGT SH1746 1807135 - 1807061 - | hypothetical protein SH1747 1807982 - 1807449 - | hypothetical protein TERM 1982 1808170 - 1808141 - R 100 -7.9 -5.84432 | opp_overlap 1808143, overlap 1808143 TATAACATAAAAAAA CAGGGACAAGCAC CGTC ATGCTTATCCCTT TACGAACTAATAGTG TERM 1983 1808168 - 1808143 - R 93 -10.5 -4.53737 | opp_overlap 1808143, overlap 1808141 TAACATAAAAAAACA GGGACAAGCAC CGTC ATGCTTATCCC TTTACGAACTAATAG TERM 1984 1808143 - 1808168 + r 71 -7.6 -3.56092 | opp_overlap 1808143 1808141 TAACATAAAAAAACA GGGACAAGCA CCGTCA TGCTTATCCC TTTACGAACTAATAG SH1748 1809608 - 1808214 - | amidase (peptidoglycan hydrolase) TERM 1985 1808422 - 1808435 + g 73 -3.8 -5.10497 | CTATTTAACACAGTG CCAG TTAGTC CTGG TTTTTTGCGTACCTT SH1749 1809869 - 1809609 - | holin TERM 1986 1809919 - 1809900 - R 95 -7.8 -5.48213 | TATTCAAAATAAAAA GCCGACAC CTAA GTGCCGAC TTAAAAGAATGCTGC SH1750 1810318 - 1809920 - | hypothetical protein TERM 1987 1810171 - 1810192 + g 93 -9.5 -4.43501 | overlap 1810166 CAAGAGATTGTTCTT GTAGAATGC TTTG GCGTTCTAC TTTTATAGATAAGTT SH1751 1810721 - 1810302 - | hypothetical protein TERM 1988 1810459 - 1810432 - G 100 -11.4 -5.18357 | opp_overlap 1810434 1810437 GAAGTCATTAAAAAA TAGAAGATACCG TTCC CGGTACCTCCTA TTAAGCATAGATAAT TERM 1989 1810773 - 1810750 - R 86 -8.9 -4.41177 | opp_overlap 1810750 TACACAAATTTAAAA GCCACAATC TACTCT GACTGTGGC TTACTTAACTCTTGA SH1752 1810907 - 1810758 - | hypothetical protein SH1753 1813401 - 1810897 - | hypothetical protein TERM 1990 1812412 - 1812422 + g 80 -2.6 -5.68039 | ATCTAACAATTCACC TAAA TGA TTTA TTTTTTTATGGATTT SH1754 1815226 - 1813415 - | hypothetical protein TERM 1991 1814359 - 1814372 + g 70 -3.8 -4.87803 | TTTCAAAATATCTGT CACG TACCAT CGTG TTTTGTTTAAAGATG SH1755 1816071 - 1815238 - | hypothetical protein TERM 1992 1816027 - 1816004 - G 100 -11.8 -5.24989 | gap 1, opp_overlap 1816001 GCAGATACTAAAAAA TCCAGT-GGCG TAA CGCCAACTGGA TAATCAATTTTATTC SH1756 1820537 - 1816074 - | hypothetical protein TERM 1993 1820781 - 1820760 - R 88 -6.6 -5.20333 | opp_overlap 1820760 TAGGTATAATAAAAA GACACCCT AAACTA AGGATGTC TTATATTCTAAATAT SH1757 1821674 - 1820766 - | hypothetical protein SH1758 1823889 - 1821811 - | hypothetical protein TERM 1994 1823952 - 1823926 - R 100 -9.6 -5.64274 | TTAGGTATAAAAAAA TAGCCTTAGT ATCAATG ACTAAGGCTA CAATGCAGAGAATAG TERM 1995 1824019 - 1823999 - R 80 -9.9 -2.78495 | opp_overlap 1823998 1823999, overlap 1823994 TCAGTATCAACAGTA TTTAGATGA CGT TCATCTAAA ATTTGAAGTATATAA TERM 1996 1823999 - 1824019 + r 80 -9.9 -2.78934 | opp_overlap 1823999 1823994, overlap 1823998 TCAGTATCAACAGTA TTTAGATGA CGT TCATCTAAA ATTTGAAGTATATAA TERM 1997 1824177 - 1824203 + r 84 -6.6 -5.0916 | opp_overlap 1824172 1824170 1824177, overlap 1824170 TAGTAAATGAGAAAA GCAATGTCCTAT ATT AAAGTACATTGC TTTTTCTATTAACGA TERM 1998 1824203 - 1824177 - R 79 -6.6 -4.63172 | opp_overlap 1824177 1824170, overlap 1824172 1824170 TAGTAAATGAGAAAA GCAATGTCCTAT ATT AAAGTACATTGC TTTTTCTATTAACGA SH1759 1825027 - 1824212 - | ATP-binding protein tnp 1826462 - 1825020 - | transposase for Tn552 SH1761 1827027 - 1826434 - | DNA-invertase TERM 1999 1827156 - 1827195 + r 73 -8 -3.49884 | opp_overlap 1827158 1827159, overlap 1827154 1827159 1827161 TATTTAGACATAAAA AACGAGTGTACAGAAAAT GGTT ATTTTCTGTACACTCTCA TCTTTAATAATATAT TERM 2000 1827193 - 1827158 - R 100 -15 -5.4251 | opp_overlap 1827156 1827154 1827159 1827161, overlap 1827159 TTTAGACATAAAAAA CGAGTGTACAGAAAAT GGTT ATTTTCTGTACACTCT CATCTTTAATAATAT TERM 2001 1827192 - 1827159 - R 100 -18.5 -3.84422 | opp_overlap 1827159 1827156 1827154 1827161, overlap 1827158 TTAGACATAAAAAAC GAGTGTACAGAAAAT GGTT ATTTTCTGTACACTC TCATCTTTAATAATA TERM 2002 1827159 - 1827192 + r 100 -18.5 -2.88215 | opp_overlap 1827158 1827159, overlap 1827156 1827154 1827161 TTAGACATAAAAAAC GAGTGTACAGAAAAT GGTT ATTTTCTGTACACTC TCATCTTTAATAATA TERM 2003 1827161 - 1827190 + r 100 -15.3 -2.98479 | opp_overlap 1827159 1827158, overlap 1827159 1827156 1827154 AGACATAAAAAACGA GTGTACAGAAAAT GGTT ATTTTCTGTACAC TCTCATCTTTAATAA blaI 1827671 - 1827291 - | beta-lactamase repressor blaR1 1829418 - 1827661 - | bla regulator protein blaR1 TERM 2004 1829458 - 1829516 + H 70 -8.6 -2.62579 | gap 1, opp_overlap 1829497, overlap 1829464 ATAATAAACTATTGA CACCGATATTACAATTGTAA-TATTAT TGATTT ATAAAAATTACAACTGTAATATCGGAG GGTTTATTTTGAAAA blaZ 1829525 - 1830370 + | beta-lactamase TERM 2005 1830592 - 1830619 + T 86 -5.7 -5.43621 | gap 1, opp_overlap 1830592 TCATCAATCGAAAAA GCAACGTATCTT ATTTA AAG-TGCGTTGC TTTTTTCTCATTTAT SH1765 1831068 - 1830706 - | hypothetical protein TERM 2006 1831119 - 1831101 - R 95 -8.8 -4.87803 | overlap 1831078 TATTTCGAAATAAAA GGACGGCA TCA CACCGTCC TAAAGATAATTTATT SH1766 1831297 - 1831130 - | hypothetical protein SH1767 1831952 - 1831311 - | hypothetical protein TERM 2007 1832011 - 1831976 - R 91 -7.1 -5.24129 | gap 1, opp_overlap 1831976 1832009, overlap 1832009 CCTCCTCATAAAAAA TTGCTTCATATCGTCT TGTTG AG-CGATACAAAGCAA ATTCTTTGTTATATT SH1768 1832360 - 1831953 - | hypothetical protein SH1769 1832779 - 1832357 - | hypothetical protein SH1770 1833140 - 1832769 - | hypothetical protein SH1771 1833426 - 1833130 - | hypothetical protein SH1772 1834622 - 1833444 - | hypothetical protein SH1773 1835551 - 1834685 - | hypothetical protein SH1774 1836689 - 1835544 - | hypothetical protein TERM 2008 1835711 - 1835723 + g 89 -6.3 -5.62045 | TATCAATCGCTTCCG CCAAT TCG ATTGG TTTTTTCTTATCTAT SH1775 1838370 - 1836709 - | hypothetical protein TERM 2009 1837054 - 1837065 + g 81 -5.8 -4.9218 | overlap 1837052 ATCCATACGGAAGTT GTCG GCTA CGAC TTTTTGTAGTCCATA SH1776 1838726 - 1838367 - | hypothetical protein SH1777 1839264 - 1838938 - | hypothetical protein TERM 2010 1839309 - 1839286 - R 100 -9.6 -5.28942 | opp_overlap 1839286 1839284 TACTCCAAACAAAAA GACACAACAC TAAT GTGCTGTGCC TGTGTATTCATTATC SH1778 1839825 - 1839382 - | hypothetical protein SH1779 1841197 - 1839839 - | hypothetical protein SH1780 1841477 - 1841199 - | hypothetical protein SH1781 1844281 - 1841834 - | hypothetical protein SH1782 1844433 - 1844296 - | hypothetical protein SH1783 1844672 - 1844433 - | hypothetical protein SH1784 1844887 - 1844678 - | hypothetical protein SH1785 1845117 - 1844893 - | hypothetical protein SH1786 1845335 - 1845117 - | hypothetical protein SH1787 1845500 - 1845342 - | hypothetical protein SH1788 1845851 - 1845537 - | hypothetical protein SH1789 1846337 - 1845852 - | hypothetical protein SH1790 1846573 - 1846334 - | hypothetical protein SH1791 1847222 - 1846590 - | hypothetical protein SH1792 1847665 - 1847237 - | single strand DNA binding protein SH1793 1848330 - 1847662 - | hypothetical protein SH1794 1848550 - 1848320 - | hypothetical protein SH1795 1848794 - 1848519 - | hypothetical protein TERM 2011 1848853 - 1848884 + r 88 -6.6 -5.20781 | ATTTTAAAAGTCTCC GACTGTTTGCTATT TGCC GATAGCATTCAGTC TTTTATTTTGTAGTA SH1796 1849049 - 1848879 - | hypothetical protein SH1797 1849369 - 1849052 - | hypothetical protein TERM 2012 1849536 - 1849523 - g 71 -5.3 -4.49364 | opp_overlap 1849523, overlap 1849516 AAAGTGAACAAGAAA TGCTT GACG AAGCA TTTGCTGTATATTTA SH1798 1849429 - 1849605 + | hypothetical protein TERM 2013 1849669 - 1849710 + T 83 -8.8 -4.54449 | TTATTTCAATATTTA CAACCTTCCAAGTCACAA CTGCCA TTGTGATGAGGAGGGTTG TTTTGTATAAAATGT SH1799 1850306 - 1849767 - | hypothetical protein TERM 2014 1850089 - 1850100 + g 73 -4.4 -4.90519 | overlap 1850088 TGTCTTCCTTCACCG TGTG TTAG CACA TTGTTTTTTTCGTTT SH1800 1851225 - 1850299 - | hypothetical protein SH1802 1851650 - 1851456 - | hypothetical protein SH1801 1851272 - 1851511 + | hypothetical protein SH1803 1852479 - 1851688 - | hypothetical protein SH1804 1852673 - 1852479 - | hypothetical protein SH1805 1852953 - 1853291 + | hypothetical protein SH1806 1853305 - 1853976 + | hypothetical protein SH1807 1854058 - 1854585 + | hypothetical protein TERM 2015 1854592 - 1854608 + F 81 -8 -4.40692 | opp_overlap 1854590 GATGAATAATTCACA GGGTAG CCCGT CTACCC TTATTATTTTTTACC TERM 2016 1855362 - 1855348 - g 72 -5 -4.68593 | TCTATTAGTCAAAAA GACATG AAT CATATC ATCAAATCAATTGAT int 1854643 - 1855668 + | integrase TERM 2017 1855780 - 1855801 + T 100 -10.9 -5.60556 | opp_overlap 1855783 ATATTTTTAGGTTGA GAACGCTGT TATG ACGGCGTTC TTTTTATTTTGTCTT TERM 2018 1855885 - 1855867 - T 91 -7.4 -5.36364 | opp_overlap 1855867 CCAAAAATAGAAAAA CCCGCCAT GTT ATGACGAG TTTCTGAGATAATAT TERM 2019 1855964 - 1855976 + T 70 -4.9 -4.81551 | overlap 1855969 CAACAACTTTTTTAC CTAAA TAA TTTAG TTTTTAATGTAAGTA SH1809 1856674 - 1856165 - | hypothetical protein TERM 2020 1856354 - 1856331 - G 71 -7.6 -3.70149 | TGTACACCATCTAAA TACTCATATT TTGC AACATGAGTA TGACCATAAAATGCA SH1810 1857255 - 1856674 - | hypothetical protein TERM 2021 1856928 - 1856944 + g 70 -2.3 -5.243 | ATCGTGCATCTCGAT TTTCGAT ACC ATCTAAA TTTTTTAATAATTTA murI 1858072 - 1857272 - | glutamate racemase TERM 2022 1858222 - 1858188 - R 82 -4.6 -5.72622 | gap 1, opp_overlap 1858188 TTTATAAAGAAAAAA GTAGTTAATCAATTC AATTAA GAATC-ATTAACTAC TTTTCAAATTATAAT sdhB 1859096 - 1858248 - | succinate dehydrogenase iron-sulfur subunit sdhA 1860862 - 1859096 - | succinate dehydrogenase flavoprotein subunit TERM 2023 1860154 - 1860175 + g 79 -10.3 -2.882 | overlap 1860153 CAGGAATAGCTGTTG GGTGAATTT GAAT AAATTCACC ATTTGCATATTTAGC sdhC 1861601 - 1860987 - | succinate dehydrogenase cytochrome b-558 TERM 2024 1861134 - 1861120 - G 73 -7.2 -4.03696 | AAGAATGACCATAAA CCATTT GAG AAATGG AAAATAACACATAAA TERM 2025 1861453 - 1861440 - G 79 -5.3 -5.08088 | AACTGCTAATAAAAA TGGAA TTGA TTCCA TAAAGCCAGCTGCCT TERM 2026 1861945 - 1861973 + r 100 -14.7 -5.65513 | overlap 1861946 TTTTTTATATGTTTT TGGGCTATGAGAA TAA TTCTCATAGCCCC TTTTTTTAATTAATC TERM 2027 1861946 - 1861972 + r 100 -18.2 -3.97681 | overlap 1861945 TTTTTATATGTTTTT GGGCTATGAGAA TAA TTCTCATAGCCC CTTTTTTTAATTAAT uvrC 1863773 - 1861983 - | excinuclease ABC subunit C TERM 2028 1863846 - 1863812 - R 95 -8.1 -5.43414 | opp_overlap 1863812 1863814, overlap 1863815 ACTACACATAAAAAA GAC-GGAGCTATTACAT TCT ATGTAAT-GCCCCAGTC TCATATAAGTTCAAA TERM 2029 1863842 - 1863815 - R 74 -8.6 -3.18985 | gap 1, opp_overlap 1863814 1863812, overlap 1863812 ACACATAAAAAAGAC GGAGCTATTACAT TCT ATGTAAT-GCCCC AGTCTCATATAAGTT trxA 1864182 - 1863868 - | thioredoxin mutS2 1866732 - 1864381 - | recombination and DNA strand exchange inhibitor protein TERM 2030 1864623 - 1864633 + g 71 -5.4 -4.57353 | GTAATTCCGTTTTAA TCGT TTG ACGA TTTTGTCTAGTGACC TERM 2031 1864647 - 1864659 + g 91 -4.1 -5.84011 | GATTTTGTCTAGTGA CCATT TTA GATGG TTTTTCTTTTTTCTT TERM 2032 1864829 - 1864840 + g 71 -3 -5.08255 | ATTTCATCATATTTT TGTT TTTG AACA TTTTGTTTTAACGAT TERM 2033 1866296 - 1866306 + g 79 -5.4 -5.07011 | CTATCATATAAATCG TGTG TAT CACA TTTTTCATTTATCTC SH1818 1868451 - 1866742 - | hypothetical protein SH1819 1869047 - 1868526 - | hypothetical protein SH1820 1869314 - 1869048 - | hypothetical protein SH1821 1869595 - 1870527 + | ribonuclease HIII TERM 2034 1870534 - 1870519 - T 72 -3.4 -5.30155 | overlap 1870529 TTAGTAACTAAAAAA TATAAA TAAA TTTATA AAGAGACGAATTCCA TERM 2035 1870575 - 1870529 - T 70 -4.7 -4.7908 | gap 1, opp_overlap 1870537, overlap 1870519 1870537 AAAAATATAAATAAA TTTATAAAGAGACGAATTCCAT TAAT ACAGAATTCGTCTCTTT-TACT TCATTATCTAATTGT TERM 2036 1870568 - 1870537 - T 100 -13.2 -4.0683 | opp_overlap 1870537, overlap 1870529 AAATAAATTTATAAA GAGACGAATTCCAT TAAT ACAGAATTCGTCTC TTTTACTTCATTATC TERM 2037 1870537 - 1870568 + T 88 -8.9 -4.51197 | opp_overlap 1870529 1870537 AAATAAATTTATAAA GAGACGAATTC CATTAATACA GAATTCGTCTC TTTTACTTCATTATC pheT 1872981 - 1870579 - | Phe-tRNA synthetase beta chain TERM 2038 1872806 - 1872817 + g 76 -4.4 -5.18643 | overlap 1872803 ATATTTAATTTATCT GCAT CAGG ATGC TTTTCTTTTGATTGA pheS 1874039 - 1872981 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2039 1873991 - 1874006 + g 74 -6.2 -4.49389 | opp_overlap 1873990 GAGCTTCATTAATAT CAACAA GTGC TTGTTG TTTTAATTCTGCCAT TERM 2040 1874099 - 1874128 + r 84 -9.3 -3.68351 | opp_overlap 1874099 TTTTTCATAAAAAAA GACTTCCATCCCA AAAC TGGGACGAAAGTC TTTCCGTGGTACCAC TERM 2041 1874128 - 1874099 - R 100 -13.7 -5.60993 | opp_overlap 1874099 TTTTTCATAAAAAAA GACTTCCATCCCA AAAC TGGGACGAAAGTC TTTCCGTGGTACCAC SH1824 1875143 - 1874403 - | hypothetical protein TERM 2042 1875326 - 1875293 - R 95 -6.2 -5.64274 | gap 1 TTATTGATAAAAAAA GAAGCATCGAACAAC ATTAA ATTGTCC-ATGCTTC ACTAAAATCATTAAG rpmF 1875519 - 1875346 - | 50S ribosomal protein L32 SH1826 1876156 - 1875602 - | hypothetical protein TERM 2043 1876919 - 1876906 - g 71 -3.1 -5.20222 | ATTAAATAAAGAAAA CACCT GGAA AGATG TCGTACCAGCAGATA SH1827 1876283 - 1877425 + | hypothetical protein TERM 2044 1877468 - 1877419 - T 100 -13.3 -5.2204 | opp_overlap 1877467, overlap 1877422 GATAATTAATAAAAA GAACTAGGACTGAGAAAA-GCTT AATTTA AAGCACTTTCTCAGTCCTAGT-C GGCTAATGCGGATTA TERM 2045 1877466 - 1877422 - T 100 -16.1 -4.67357 | gap 1, overlap 1877419 AATTAATAAAAAGAA CTAGGACTGAGAAAA-GCTT AATTTA AAGCACTTTCTCAGTCCTAG TCGGCTAATGCGGAT SH1828 1878036 - 1877551 - | hypothetical protein SH1829 1878580 - 1878029 - | hypothetical protein SH1830 1878650 - 1879039 + | hypothetical protein SH1831 1879293 - 1879042 - | hypothetical protein SH1832 1879463 - 1880392 + | hypothetical protein TERM 2046 1880408 - 1880450 + T 81 -8 -4.3739 | opp_overlap 1880411, overlap 1880411 ACGCGCTATAAAGTA AAAGGAGAAAGAAATC AAATGCATTAC GATTTCTTTCTCCTTA TTTTATGACAAACTA TERM 2047 1880411 - 1880447 + T 88 -9.7 -4.30995 | opp_overlap 1880411, overlap 1880408 CGCTATAAAGTAAAA GGAGAAAGAAATC AAATGCATTAC GATTTCTTTCTCC TTATTTTATGACAAA TERM 2048 1880447 - 1880411 - T 100 -11.8 -4.61873 | opp_overlap 1880411 1880408 CGCTATAAAGTAAAA GGAGAAAGAAATCAAA TGCAT TACGATTTCTTTCTCC TTATTTTATGACAAA SH1833 1880890 - 1880453 - | hypothetical protein SH1834 1881976 - 1880918 - | hypothetical protein TERM 2049 1882133 - 1882110 - R 100 -12.6 -5.27923 | opp_overlap 1882116 TAATGTTACAAAAAA GACTAAGACA ATGA TGTCTTAGTC TCAATCAATTTGTAT SH1835 1882633 - 1882172 - | hypothetical protein ctaB 1883574 - 1882663 - | protoheme IX farnesyltransferase TERM 2050 1883400 - 1883376 - G 89 -11.7 -3.36175 | opp_overlap 1883380, overlap 1883380 AAGCGCCACCCATAA TTAATGTTGAT CCA ATCAACATTAA TAGAATTTGAGGTAT TERM 2051 1883380 - 1883396 + g 70 -8.1 -3.2048 | opp_overlap 1883376 1883380 GCCACCCATAATTAA TGTTGAT CCA ATCAACA TTAATAGAATTTGAG TERM 2052 1883396 - 1883380 - G 72 -8.1 -3.45945 | opp_overlap 1883380, overlap 1883376 GCCACCCATAATTAA TGTTGAT CCA ATCAACA TTAATAGAATTTGAG ctaA 1883822 - 1884736 + | cytochrome caa3 oxidase ctaA TERM 2053 1884752 - 1884780 + T 100 -19.1 -4.86621 | opp_overlap 1884752 CCTATTAGTATAAAA GGAGATGTGAATG GTT CATTCACATCTCC TTTTTAATTAAAAAT TERM 2054 1884780 - 1884752 - T 100 -19.1 -4.4891 | opp_overlap 1884752 CCTATTAGTATAAAA GGAGATGTGAATG GTT CATTCACATCTCC TTTTTAATTAAAAAT pycA 1888353 - 1884904 - | pyruvate carboxylase TERM 2055 1888650 - 1888634 - R 71 -4.5 -4.84761 | opp_overlap 1888643, overlap 1888643 ATATTTTCATAAAAA TGTAAAA AAC CTTTACA TGAAATCAAGCTTTA TERM 2056 1888678 - 1888643 - R 100 -11.4 -5.30575 | opp_overlap 1888643, overlap 1888634 TAAAAATGTAAAAAA CCTTTACATGAAATCA AGCT TTATTTCACGTAAAGG TTATCATCCTTATTT TERM 2057 1888643 - 1888678 + r 79 -9.2 -3.50358 | opp_overlap 1888634 1888643 TAAAAATGTAAAAAA CCTTTACATGAAATCA AGCT TTATTTCACGTAAAGG TTATCATCCTTATTT TERM 2058 1888704 - 1888717 + r 71 -2.4 -5.54907 | TATTTAAGAGATTAT CTAG TTATAC CTAG TTTTTGTTTTCTAGC SH1839 1889926 - 1888700 - | hypothetical protein TERM 2059 1889272 - 1889260 - G 73 -7.7 -3.76888 | CACTTACAATAAAGA GCGAT GCA ATCGC GATGAAACTTCCTGC TERM 2060 1890152 - 1890118 - R 100 -9.7 -4.89567 | gap 1, opp_overlap 1890128 GCTTAAAATATAAAA TGACTGAAAATATTAT AAAC ATAATATTT-CAGTCA CAATGGTGAGATAAT SH1840 1890530 - 1890252 - | hypothetical protein SH1841 1890671 - 1891156 + | hypothetical protein SH1842 1891158 - 1891349 + | hypothetical protein TERM 2061 1891387 - 1891422 + T 95 -12.1 -3.73509 | opp_overlap 1891387 GTTTTACTCAAAAAA GCCAGTAAATGAAAT GACAAA ATCTCATTTACTGGC TTTCAAATTTAATGT TERM 2062 1891422 - 1891387 - T 100 -14.3 -5.08824 | opp_overlap 1891387 GTTTTACTCAAAAAA GCCAGTAAATGAAAT GACAAA ATCTCATTTACTGGC TTTCAAATTTAATGT SH1843 1893313 - 1891469 - | hypothetical protein TERM 2063 1892433 - 1892455 + g 72 -9.2 -2.62442 | overlap 1892432 GCTTCTTGGTGGTCT GTAGGTGTAA CTG TTTCACCTAC GTTAATATCTTCCAT SH1844 1893411 - 1893602 + | hypothetical protein TERM 2064 1893669 - 1893613 - T 91 -8.3 -5.10064 | gap 1, opp_overlap 1893613 TTTAATATAGAAAAA TGTCTCGGT-AGTAAAATTTGGAAGA AATTCA CCTTTCAAAGTTGACTGACCGAGACA TTTTTTATTTTCTAA TERM 2065 1893613 - 1893669 + T 100 -9.8 -5.86976 | gap 1, opp_overlap 1893613 TTTAATATAGAAAAA TGTCTCGGT-AGTAAAATTTGGAAG AAATTCAC CTTTCAAAGTTGACTGACCGAGACA TTTTTTATTTTCTAA SH1845 1894489 - 1893674 - | hypothetical protein TERM 2066 1895028 - 1895014 - g 75 -7.2 -4.14392 | opp_overlap 1895009 1895014 GCTGAACGTGTAAAA GTGTTT GAT AAACAC TTTGATGTGCTCAAA TERM 2067 1895014 - 1895028 + G 70 -7.2 -3.86202 | opp_overlap 1895014, overlap 1895009 GCTGAACGTGTAAAA GTGTTT GAT AAACAC TTTGATGTGCTCAAA SH1846 1894669 - 1895280 + | hypothetical protein TERM 2068 1895360 - 1895332 - f 70 -5.9 -4.26903 | TTTACCTTAGTAAAA GCCTGGGCCAATA ATT CAATGACTCAGGC TATAAATATATATTG TERM 2069 1895482 - 1895464 - f 79 -6.8 -4.8048 | GGGCCACAGCAAAAA GAATTTCC TAA AGAAATTC TACAAGCTAAGCGAG SH1847 1895631 - 1896971 + | Mn2+/Fe2+ transporter TERM 2070 1896971 - 1897019 + T 100 -9.9 -4.91977 | opp_overlap 1896977, overlap 1896972 1896977 CTTTAAAGAATTATA AAAAAATCTAACGATTTAGCATT ATA AATACTAAGTCGTTAGATTTTAG TTTTATATTTTAATA TERM 2071 1896972 - 1897018 + T 100 -13.4 -3.53559 | opp_overlap 1896977, overlap 1896971 1896977 TTTAAAGAATTATAA AAAAATCTAACGATTTAGCATT ATA AATACTAAGTCGTTAGATTTTA GTTTTATATTTTAAT TERM 2072 1896977 - 1897013 + T 100 -13.3 -4.76874 | opp_overlap 1896977, overlap 1896972 1896971 AGAATTATAAAAAAA TCTAACGATTTAGCATT ATA AATACTAAGTCGTTAGA TTTTAGTTTTATATT TERM 2073 1897013 - 1896977 - T 100 -13.3 -5.73339 | opp_overlap 1896972 1896971 1896977 AGAATTATAAAAAAA TCTAACGATTTAGCATT ATA AATACTAAGTCGTTAGA TTTTAGTTTTATATT SH1848 1897514 - 1897029 - | hypothetical protein TERM 2074 1897641 - 1897617 - R 91 -8 -4.99638 | gap 1, opp_overlap 1897617 ATATTGACACAAAAA CGGTTAAGCCA TATA TGG-TTAACCG TTTTAAGTGTATATT TERM 2075 1897617 - 1897641 + r 81 -8 -4.27861 | gap 1, opp_overlap 1897617 ATATTGACACAAAAA CGGTTAAGCCA TATA TGG-TTAACCG TTTTAAGTGTATATT SH1849 1898857 - 1897655 - | hypothetical protein potD 1900003 - 1898930 - | spermidine:putrescine-binding protein potC 1900812 - 1900000 - | putative spermidine/putrescine ABC transporter, permease protein TERM 2076 1900512 - 1900532 + g 77 -8.5 -3.61803 | opp_overlap 1900514, overlap 1900509 ACGAAACCATTAGCA CATTATTAA GCG TTAATAATG TTACTTTAAATTTTT potB 1901621 - 1900818 - | spermidine/putrescine ABC transporter permease protein potA 1902708 - 1901614 - | spermidine:putrescine ABC transporter ATP-binding protein TERM 2077 1902589 - 1902573 - G 89 -9.5 -4.1585 | CTATAAGTTTTAAAA TTGTGGT TTT ACCACAA CCTGAAGGACCTAGT SH1854 1903263 - 1902724 - | hypothetical protein TERM 2078 1903046 - 1903056 + g 77 -3.2 -5.49568 | GTTCGTTCATTTTTA GTGT ATA GCAC TTTTTCTTTTGACTT TERM 2079 1903292 - 1903310 + r 75 -5.4 -4.96388 | opp_overlap 1903284 1903302 1903304, overlap 1903284 1903301 1903304 AAAAAAGCTATACTT TGTTTAGT AAT ATTAAACA TTTTGTTTAATGCTT SH1855 1903706 - 1903434 - | hypothetical protein TERM 2080 1903776 - 1903820 + r 95 -12.4 -3.12999 | gap 1, opp_overlap 1903778, overlap 1903778 1903791 TAAATAATTATAAAA AAGGGGTGAAACT-AAGTTCA AACA TGAACTTGAGTTGCACCCCTC TTGGATGTCAAATAA TERM 2081 1903778 - 1903818 + r 100 -15 -3.12505 | gap 1, opp_overlap 1903778, overlap 1903776 1903791 AATAATTATAAAAAA GGGGTGAAACT-AAGTTCA AACA TGAACTTGAGTTGCACCCC TCTTGGATGTCAAAT TERM 2082 1903818 - 1903778 - R 100 -15 -5.4111 | gap 1, opp_overlap 1903776 1903778 1903791 AATAATTATAAAAAA GGGGTGAAACT-AAGTTCA AACA TGAACTTGAGTTGCACCCC TCTTGGATGTCAAAT pdhD 1905301 - 1903895 - | dihydrolipoamide dehydrogenase TERM 2083 1904636 - 1904646 + g 77 -5.4 -4.87389 | CATGCCTTTTTTAAC TGGT TGA ACCA TTTGTTTTTCGAATC pdhC 1906606 - 1905305 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 2084 1906762 - 1906750 - R 72 -4.9 -4.86133 | opp_overlap 1906750 CACATAGAGTAAAAA GTAAA CAT TTTAC TTACTTCCTATAAGT phdB 1907786 - 1906809 - | pyruvate dehydrogenase E1 component beta subunit TERM 2085 1906853 - 1906869 + g 89 -9.5 -4.23007 | opp_overlap 1906868 CAATGATGTCGTTTT TGTTTGG TAA CCAAACA TTTTCAGCTTGTGTA SH1859 1908902 - 1907790 - | pyrubate dehydrogenase E1 component alpha subunit TERM 2086 1908337 - 1908311 - G 76 -4.4 -5.18726 | TTTGGATAACAAAAA TTGCTGGCGCTT TAT AAGCAGAAGCAA AGTTGATACCTTCAT TERM 2087 1909038 - 1909015 - R 91 -8.3 -5.1861 | opp_overlap 1909017 1909019 TGTATTACTAAAAAA GATACAGTT TTTTAC AACTGTATC ATTCCAATCAACTAA SH1860 1909698 - 1909075 - | hypothetical protein def 1909829 - 1910380 + | peptide deformylase TERM 2088 1910402 - 1910435 + F 100 -12.7 -6.28967 | opp_overlap 1910408 AACAATTTTATTTTG CTCAAACTACTTTCA ACGA TGAAACTAGTTTGAG TTTTTTTTATTTGTA SH1862 1910870 - 1911088 + | hypothetical protein SH1863 1911088 - 1912767 + | hypothetical protein TERM 2089 1912821 - 1912862 + F 95 -11.1 -4.44448 | opp_overlap 1912822 1912824, overlap 1912824 ATAATTCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 2090 1912861 - 1912822 - f 100 -12.4 -4.0492 | opp_overlap 1912821 1912824, overlap 1912824 TAATTCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 2091 1912859 - 1912824 - f 100 -15 -3.615 | opp_overlap 1912821 1912824, overlap 1912822 ATTCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 2092 1912824 - 1912859 + F 100 -17.2 -4.33281 | opp_overlap 1912824 1912822, overlap 1912821 ATTCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH1864 1912832 - 1912981 + | hypothetical protein tnp 1913078 - 1913302 + | IS1272 transposase SH1866 1913666 - 1913280 - | hypothetical protein TERM 2093 1913435 - 1913446 + g 82 -3 -5.68438 | opp_overlap 1913435 CAATATATAAACTTA TAAG TATT CTTA TTTTTTCTTTCATAG SH1867 1914485 - 1913826 - | hypothetical protein cbdB 1915627 - 1914611 - | cytochrome D ubiquinol oxidase subunit II cbdA 1916979 - 1915627 - | cytochrome D ubiquinol oxidase subunit I TERM 2094 1915915 - 1915935 + g 76 -4 -5.2189 | opp_overlap 1915906, overlap 1915916 ATATAACATACCTTT ATGCGTAA CGTAT TTACGCAG TTTTTTAATCATTAA TERM 2095 1915916 - 1915934 + g 73 -7.5 -3.72049 | opp_overlap 1915906, overlap 1915915 TATAACATACCTTTA TGCGTAA CGTAT TTACGCA GTTTTTTAATCATTA SH1870 1917183 - 1917416 + | hypothetical protein TERM 2096 1917467 - 1917434 - f 82 -9.1 -3.78778 | gap 1, opp_overlap 1917434 TCATCACACTAATAA CCTAAC-ACTAAAAAG GAA CTATTTAGTTGTTAGG TTTTTTTATTTTGTA TERM 2097 1917434 - 1917467 + F 100 -9.1 -6.14618 | gap 1, opp_overlap 1917434 TCATCACACTAATAA CCTAAC-ACTAAAAAG GAA CTATTTAGTTGTTAGG TTTTTTTATTTTGTA TERM 2098 1917557 - 1917518 - f 81 -8.8 -4.07562 | opp_overlap 1917517 1917520, overlap 1917520 TAAACCCTAGAGAAA TAGCCAATAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 2099 1917555 - 1917520 - f 93 -11.4 -3.62348 | opp_overlap 1917517 1917520, overlap 1917518 AACCCTAGAGAAATA GCCAATAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 2100 1917520 - 1917555 + F 95 -11.4 -4.33281 | opp_overlap 1917520 1917518, overlap 1917517 AACCCTAGAGAAATA GCCAATAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH1871 1917528 - 1917677 + | hypothetical protein TERM 2101 1917893 - 1917877 - gf 71 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 2102 1918647 - 1918661 + GF 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG tnp 1917761 - 1919095 + | IS1272 transposase TERM 2103 1919356 - 1919388 + GT 95 -8 -5.55698 | opp_overlap 1919356 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 2104 1919388 - 1919356 - gT 93 -8 -5.35222 | opp_overlap 1919356 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 1919059 - 1919463 + | IS1272 transposase ptsI 1921155 - 1919440 - | phosphoenolpyruvate-protein phosphatase TERM 2105 1921133 - 1921110 - G 79 -9.6 -3.17486 | AATAAGCTTTAGCAA TTGCGACACC GTCT GATGCCGCAA TACCATTAATTAATT ptsH 1921424 - 1921158 - | phosphocarrier protein HPr SH1876 1922301 - 1921759 - | hypothetical protein SH1877 1923531 - 1922359 - | hypothetical protein TERM 2106 1923703 - 1923656 - R 86 -4.3 -5.7827 | gap 1 AACATAAACAAAAAA GGTGG-ATCGCGAAGTCTAT TTTGTCACC ATAGATTTCACGCTTCCACC TAAGTAAAATTTGAA SH1878 1925018 - 1923723 - | hypothetical protein SH1879 1925168 - 1925287 + | hypothetical protein TERM 2107 1925320 - 1925299 - f 70 -5.9 -4.29227 | TTAATTATTAAGAAA TCTCAATTC GCAG GAGTTGAGA ACAATATACTATTTA TERM 2108 1925373 - 1925404 + F 100 -8.9 -5.65496 | gap 1, opp_overlap 1925373 GTAGTTAACTAAAAA CTGAGAGAACGCTC TTTCC GAGC-TTTTCTCAG TTTTTATTTTTAATA TERM 2109 1925404 - 1925373 - f 83 -6.7 -4.88407 | gap 1, opp_overlap 1925373 GTAGTTAACTAAAAA CTGAGAGAACGCTC TTTCC GAGCTTT-TCTCAG TTTTTATTTTTAATA TERM 2110 1925716 - 1925743 + F 100 -10.6 -5.00616 | opp_overlap 1925713 1925716 TTTTATTTAAATTCA CGCACAACTTTC TACG GATGGTTGTGCG TTTTTTAGGAGGAAA TERM 2111 1925743 - 1925716 - f 70 -8.4 -2.66272 | opp_overlap 1925716, overlap 1925713 TTTTATTTAAATTCA CGCACAACTTTC TACG GATGGTTGTGCG TTTTTTAGGAGGAAA SH1880 1925763 - 1926338 + | hypothetical protein TERM 2112 1926439 - 1926486 + G 71 -7.8 -3.5485 | opp_overlap 1926444 1926481, overlap 1926434 1926443 1926444 1926481 AAATTAAAGATAAAG AAAAAGTGCTTTTACTAGGTCC TTCT GGATCTGGTAAGAGCACATTGC TTAATGTTTTAAGTG TERM 2113 1926443 - 1926482 + G 93 -13 -3.49562 | opp_overlap 1926444 1926481, overlap 1926439 1926434 1926444 1926481 TAAAGATAAAGAAAA AGTGCTTTTACTAGGTCC TTCT GGATCTGGTAAGAGCACA TTGCTTAATGTTTTA TERM 2114 1926444 - 1926481 + G 100 -16.5 -2.68653 | opp_overlap 1926444, overlap 1926443 1926439 1926434 AAAGATAAAGAAAAA GTGCTTTTACTAGGTCC TTCT GGATCTGGTAAGAGCAC ATTGCTTAATGTTTT TERM 2115 1926481 - 1926444 - g 100 -9.9 -5.48623 | opp_overlap 1926443 1926439 1926434 1926444 AAAGATAAAGAAAAA GTGCTTTTACTAGGTCC TTCT GGATCTGGTAAGAGCAC ATTGCTTAATGTTTT SH1881 1926351 - 1927754 + | hypothetical protein SH1882 1927747 - 1928556 + | hypothetical protein TERM 2116 1928562 - 1928595 + T 100 -14.8 -5.22943 | gap 1, opp_overlap 1928562 TACCTCATAAAAAAA TAGGGCGTATCACTG TCCAT CAG-GATACGCCCTA TTTTTTACATTTACT TERM 2117 1928595 - 1928562 - T 100 -14.8 -5.626 | gap 1, opp_overlap 1928562 TACCTCATAAAAAAA TAGGGCGTATCACTG TCCAT CAG-GATACGCCCTA TTTTTTACATTTACT purD 1929847 - 1928606 - | phosphoribosylamine--glycine ligase purH 1931359 - 1929881 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purN 1931941 - 1931375 - | phosphoribosylglycinamide formyltransferase purM 1932972 - 1931941 - | phosphoribosylaminoimidazole synthetase purF 1934449 - 1932965 - | amidophosphoribosyltransferase purL 1936617 - 1934428 - | phosphoribosylformylglycinamidine synthase II purQ 1937281 - 1936610 - | phosphoribosylformylglycinamidine synthase I SH1890 1937543 - 1937283 - | hypothetical protein purC 1938247 - 1937543 - | phosphoribosylaminoimidazole-succinocarboxamide synthase purK 1939387 - 1938251 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 1939844 - 1939362 - | phosphoribosylaminoimidazole carboxylase PurE folD 1940056 - 1940913 + | FolD bifunctional protein TERM 2118 1940990 - 1941009 + T 100 -13.6 -4.31433 | opp_overlap 1940990 AAAGCGAAATCAAAA CCACCCGT GTGA ACGGGTGG TTTGTTCTACGGCTA TERM 2119 1941009 - 1940990 - T 100 -13.6 -4.59424 | opp_overlap 1940990 AAAGCGAAATCAAAA CCACCCGT GTGA ACGGGTGG TTTGTTCTACGGCTA TERM 2120 1941089 - 1941110 + T 82 -4.3 -5.69023 | overlap 1941091 1941094 ACTGCACTACTTTCC CAGCACCCC TAAA GGGGTACTA TTTTTTTCGTCTTTT TERM 2121 1941091 - 1941108 + T 74 -6.9 -4.44318 | overlap 1941089 1941094 TGCACTACTTTCCCA GCACCCC TAAA GGGGTAC TATTTTTTTCGTCTT SH1895 1941184 - 1941080 - | hypothetical protein tnp 1941590 - 1941270 - | IS605/IS200-like transposase TERM 2122 1941692 - 1941710 + H 100 -13.2 -4.99645 | opp_overlap 1941695 GAAACCTTTTCTGAA CCATACGC ATA GCGTATGG TTTTCTTTATACAAT TERM 2123 1941755 - 1941796 + H 95 -11.1 -4.44448 | opp_overlap 1941756 1941758, overlap 1941758 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 2124 1941795 - 1941756 - H 100 -12.4 -4.07562 | opp_overlap 1941755 1941758, overlap 1941758 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 2125 1941793 - 1941758 - H 100 -15 -3.62348 | opp_overlap 1941755 1941758, overlap 1941756 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 2126 1941758 - 1941793 + H 100 -17.2 -4.33281 | opp_overlap 1941758 1941756, overlap 1941755 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH1897 1941766 - 1941915 + | hypothetical protein TERM 2127 1942131 - 1942115 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 2128 1942885 - 1942899 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 2129 1943627 - 1943595 - g 90 -8 -5.35222 | opp_overlap 1943595 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 2130 1943595 - 1943627 + G 93 -8 -5.55698 | opp_overlap 1943595 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC tnp 1941999 - 1943699 + | IS1272 transposase SH1899 1944863 - 1943718 - | hypothetical protein SH1900 1945127 - 1945444 + | hypothetical protein TERM 2131 1945461 - 1945481 + F 100 -8.4 -5.71712 | opp_overlap 1945466 ATGACAAATTTTTGA GATGAGAT GAATA ATCTCATC TTTTTTTGTGTCAAA TERM 2132 1945959 - 1945949 - g 71 -3.2 -5.20333 | overlap 1945958 TAGCTACAATAAAAA CAGC GAA ACTG GTAAGATGCACCACA SH1901 1945740 - 1946864 + | hypothetical protein qoxB 1946864 - 1948852 + | quinol oxidase polypeptide I TERM 2133 1948939 - 1948984 + G 95 -13.5 -3.40522 | gap 1, overlap 1948924 CCGAATTCTCATTAT TCGGTACCTTGTTCGCAACGTT ATT AACGTTGC-AACATGGTGGCGA TTATGCTGGCAAAAT qoxC 1948842 - 1949447 + | quinol oxidase polypeptide III SH1904 1949444 - 1949734 + | hypothetical protein TERM 2134 1949795 - 1949757 - f 100 -17.1 -4.05033 | gap 1, opp_overlap 1949757, overlap 1949760 TTTATCTCACACAAA GAACCTGTTATGAAACTC GTCA GAGTTTCA-AACAGGTTC TTTCTTTATGCTTTC TERM 2135 1949757 - 1949795 + F 100 -17.1 -4.65032 | gap 1, opp_overlap 1949757 1949760 TTTATCTCACACAAA GAACCTGTTATGAAACTC GTCA GAGTTTCA-AACAGGTTC TTTCTTTATGCTTTC TERM 2136 1949792 - 1949760 - f 100 -13 -4.15029 | gap 1, opp_overlap 1949757, overlap 1949757 ATCTCACACAAAGAA CCTGTTATGAAACTC GTCA GAGTTTCA-AACAGG TTCTTTCTTTATGCT TERM 2137 1949821 - 1949848 + F 81 -8 -4.30719 | CTTTCATATCATACC TGATTTAAGTTA TCTT TAATTTAAATCA TTTATTGTGAAGGAG SH1905 1949877 - 1950776 + | ribonucleoside hydrolase RihC tnp 1950920 - 1952092 + | transposase for IS256 fmt 1953346 - 1952171 - | autolysis and methicillin resistant-related protein TERM 2138 1953508 - 1953542 + H 70 -5.2 -4.49939 | overlap 1953500 1953510 TACATCGTACTTTAG TATGATAAAGTATTAT CTA ATATTGCTTTATCATC TTTTGTAAATTCTAT TERM 2139 1953510 - 1953540 + H 73 -7.8 -3.84906 | overlap 1953500 1953508 CATCGTACTTTAGTA TGATAAAGTATTAT CTA ATATTGCTTTATCA TCTTTTGTAAATTCT SH1908 1953805 - 1955061 + | hypothetical protein SH1909 1955080 - 1955550 + | hypothetical protein TERM 2140 1955565 - 1955595 + F 100 -14.3 -5.82281 | overlap 1955586 ATCAAATAATTTCCA CTCCTTTTTACAA ATTTG TTGTAAAAAGGAG TTTTTTTATATCTTT TERM 2141 1955722 - 1955712 - g 73 -4 -5.10526 | ATAGTAAAAAACAAA GATA TGT TATC AGAATGCTTTTATAT SH1910 1955688 - 1956110 + | hypothetical protein TERM 2142 1959273 - 1959252 - g 73 -8.1 -3.695 | overlap 1959246 GTTAAAGACTTGAAA GTTCAAAAC TCTA GTTCTGAAC AAAAAACATCAGGTA TERM 2143 1959346 - 1959314 - g 72 -4.9 -4.72127 | TAACAACAAAAATAA TGGTCTATACTCAAT TGC ATGGGGTACAAACCA ACAACGTTTAGATAA atl 1956363 - 1960448 + | autolysin TERM 2144 1960585 - 1960556 - f 100 -13.8 -4.30987 | opp_overlap 1960556 AGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTTATGTTTTTGA TERM 2145 1960556 - 1960585 + F 100 -13.8 -5.36364 | opp_overlap 1960556 AGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTTATGTTTTTGA TERM 2146 1961026 - 1961010 - g 73 -4.5 -4.88918 | TTATTTCAAATAAAA CAAAACT TGC AGTTTTA AATAAAGCACAAGAA TERM 2147 1961993 - 1961963 - g 100 -16.4 -5.95946 | opp_overlap 1961961 1961971 1961972 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTAGGACTCAT tnp 1960673 - 1961989 + | transposase for ISSha1 TERM 2148 1962039 - 1962071 + T 100 -13.7 -5.05301 | opp_overlap 1962039 TAGAGCCATTAAAAA GACAATTTCTATTGA TAA TCTATAGAAATTGTC TTTTTATAATTATTT TERM 2149 1962071 - 1962039 - T 100 -13.7 -4.76041 | opp_overlap 1962039 TAGAGCCATTAAAAA GACAATTTCTATTGA TAA TCTATAGAAATTGTC TTTTTATAATTATTT atlR 1962649 - 1962230 - | ATL autolysin transcription regulator SH1914 1963363 - 1962836 - | hypothetical protein SH1915 1963517 - 1964524 + | hypothetical protein TERM 2150 1964603 - 1964629 + F 70 -6 -4.42765 | opp_overlap 1964603 ATTATTCTAAAAATT TTGTAGTAACAT TCA AGGTTACTATAA TTTGGTTTTTTGAGG TERM 2151 1965676 - 1965661 - g 71 -7.6 -3.53224 | GATTTCTGCGTCAAA GTGCTT GAAG AAGCAC ACGTAGCAATGGTTC hisC 1964653 - 1965816 + | hypothetical protein TERM 2152 1965884 - 1965831 - T 100 -15 -5.27477 | gap 1, opp_overlap 1965836 1965843 ACCTTAATTAAAAAA GGACACTTAAAATAGTGGTTAACTG TCAAT CAGTTTATCACTATTT-AAGTGTCC TAAAATTATACATTT TERM 2153 1965836 - 1965879 + T 71 -8.5 -2.81471 | gap 1, opp_overlap 1965831, overlap 1965843 AATTAAAAAAGGACA CTTAAAATAGTGGTTAACTG TCAAT CAGTTTATCACTAT-TTAAG TGTCCTAAAATTATA TERM 2154 1965843 - 1965873 + T 73 -7.7 -3.727 | opp_overlap 1965831, overlap 1965836 AAAGGACACTTAAAA TAGTGGTTAACTG TCAAT CAGTTTATCACTA TTTAAGTGTCCTAAA menB 1966737 - 1965919 - | naphthoate synthase SH1918 1967533 - 1966730 - | hypothetical protein menD 1969190 - 1967520 - | menaquinone biosynthesis protein SH1920 1970547 - 1969180 - | hypothetical protein SH1921 1970727 - 1971665 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase SH1922 1972318 - 1971764 - | hypothetical protein SH1923 1972505 - 1972735 + | hypothetical protein SH1924 1972814 - 1972915 + | hypothetical protein TERM 2155 1972971 - 1972918 - T 76 -4.3 -5.26119 | gap 2, opp_overlap 1972926, overlap 1972926 TGGTCAAAAATAAAA TGTAAAAAGGTCTATTCGCTAACTT TGATTT AAG-TAGTGAATAGACC-TTTTATA ATGAGTTACAGGATC TERM 2156 1972926 - 1972964 + T 93 -10.6 -4.48741 | gap 1, opp_overlap 1972918 1972926 AATAAAATGTAAAAA GGTCTATTCGCTAACTT TGATTT AAG-TAGTGAATAGACC TTTTATAATGAGTTA TERM 2157 1972964 - 1972926 - T 95 -8.4 -4.91084 | gap 1, opp_overlap 1972926, overlap 1972918 AATAAAATGTAAAAA GGTCTATTCGCTAACTT TGATTT AAG-TAGTGAATAGACC TTTTATAATGAGTTA SH1925 1973210 - 1972992 - | hypothetical protein SH1926 1973424 - 1974008 + | hypothetical protein TERM 2158 1974029 - 1974071 + F 86 -7.2 -5.13473 | opp_overlap 1974031, overlap 1974031 CGTTTAATTTTAAAT CATACGGGACTTTTATATTA ATA TAGTGTAAATGTTCCGTATA TTTTTTAAATATAAT TERM 2159 1974031 - 1974069 + F 91 -9.8 -4.19215 | opp_overlap 1974031, overlap 1974029 TTTAATTTTAAATCA TACGGGACTTTTATATTA ATA TAGTGTAAATGTTCCGTA TATTTTTTAAATATA TERM 2160 1974373 - 1974394 + F 90 -5.9 -5.61881 | opp_overlap 1974373 ACTCAAATCATTAAA GAACGTTGA TATA TAAACGTTC TTTTTATTTTTCGGC TERM 2161 1974421 - 1974451 + F 100 -14.2 -5.20783 | opp_overlap 1974421 CGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2162 1974451 - 1974421 - f 100 -16.4 -4.30719 | opp_overlap 1974421 CGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2163 1974595 - 1974581 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 2164 1975857 - 1975827 - g 100 -16.4 -5.95946 | opp_overlap 1975825 1975835 1975836 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTAGGACTCAT tnp 1974537 - 1975853 + | transposase for ISSha1 SH1928 1976228 - 1976338 + | hypothetical protein SH1929 1976352 - 1976825 + | hypothetical protein TERM 2165 1977090 - 1977075 - g 72 -2.6 -5.31072 | overlap 1977064 AGAATATAAGAAAAA TTCTTC TAGT AAAGAA AATCAAGCTAGCCAA SH1930 1976896 - 1977471 + | hypothetical protein TERM 2166 1977658 - 1977646 - T 79 -4.9 -5.42975 | opp_overlap 1977650, overlap 1977648 1977650 TTAGATAAATAAAAA TATAG CGG CTATA GAATTAACTCCTCAA TERM 2167 1977680 - 1977650 - T 73 -7.6 -3.73347 | opp_overlap 1977650, overlap 1977646 1977648 ATAAATAAAAATATA GCGGCTATAGAA TTAACTC CTCAATAGCCGC TTAGTTATATTAATA lplA 1978679 - 1977690 - | lipoate-protein ligase SH1932 1978880 - 1979056 + | hypothetical protein TERM 2168 1979048 - 1979036 - f 70 -6.3 -4.08144 | opp_overlap 1979036 GTTATTAATCATAAA CGATA TAC TATCG TTGAATAAGAAGGTA SH1933 1979073 - 1979675 + | hypothetical protein TERM 2169 1979705 - 1979680 - T 100 -12.1 -5.28176 | opp_overlap 1979680 TTCATGGATAAAAAA CTTTTCTTAGT TAAA ACTAAGAAAAG TTTTTTTGAAGTAAT TERM 2170 1979680 - 1979705 + T 100 -12.1 -5.44721 | opp_overlap 1979680 TTCATGGATAAAAAA CTTTTCTTAGT TAAA ACTAAGAAAAG TTTTTTTGAAGTAAT SH1934 1981270 - 1979759 - | hypothetical protein TERM 2171 1980463 - 1980478 + g 79 -4.6 -5.22943 | CAATATCTTCTTTTT CGAACG AGTT CGTACG TTTTTTAAATTTAAT TERM 2172 1981375 - 1981344 - R 100 -13.2 -5.26875 | opp_overlap 1981344 1981341 1981339 TTTCTAATCAAAAAA GCATTCTCAGAATT AATA ATTTCTGAGAATGC TAATATATTTAACCA TERM 2173 1981344 - 1981375 + r 100 -13.2 -2.80821 | opp_overlap 1981344, overlap 1981341 1981339 TTTCTAATCAAAAAA GCATTCTCAGAATT AATA ATTTCTGAGAATGC TAATATATTTAACCA SH1935 1982742 - 1981384 - | hypothetical protein SH1936 1984680 - 1982761 - | hypothetical protein TERM 2174 1983611 - 1983584 - G 100 -13.6 -6.09196 | GTTAAAATAAAAAAA GTATCGTCTACA GCTT TGTAGACGACAC CTGAACCAACTTCAT TERM 2175 1984647 - 1984662 + g 84 -5.4 -5.39755 | TTCGACGATACTGTT CACGTG GTAT TACGTG TTTTTTATCATTATC TERM 2176 1984910 - 1984872 - R 100 -11.3 -4.54323 | AATGATAATAATAAA GCCTTTTAAACTTAATG ATATA CATCAAATCTAAAAGGC TCGAATCACTTATTT SH1937 1985727 - 1984930 - | hypothetical protein TERM 2177 1985793 - 1985763 - R 100 -12.7 -4.68511 | opp_overlap 1985765 TTTAATACAAATAAA GAGACCTATGCTA AATAA TAGCAAAGGTCTC ACTTAGCAAATAAAT TERM 2178 1985765 - 1985791 + r 75 -9.5 -2.52896 | opp_overlap 1985763 TAATACAAATAAAGA GACCTATGCTA AATAA TAGCAAAGGTC TCACTTAGCAAATAA SH1938 1985881 - 1985816 - | hypothetical protein TERM 2179 1985857 - 1985874 + g 71 -8.5 -3.10464 | opp_overlap 1985851 1985860 ACGATAAAGCGCTAA CCATCAA GTAG TTGATGG TCTTCAAGTTACTCC TERM 2180 1985890 - 1985910 + r 73 -8.3 -3.41962 | TCTTCAAGTTACTCC CCTCTGACA AAT TGTCATAGG TATTCATTTGTTAAG prfC 1987588 - 1986026 - | peptide chain release factor 3 TERM 2181 1986341 - 1986357 + g 73 -8.1 -3.60798 | overlap 1986355 TTGGATTGCTCCTTC TTGAACA AGC TGTTCAA TTCCTTTATGGAAAT TERM 2182 1986355 - 1986373 + g 74 -3.1 -5.38326 | overlap 1986341 1986358 CTTGAACAAGCTGTT CAATTCC TTTAT GGAAATG TTTTTGTTTCATTAC SH1940 1987843 - 1987589 - | hypothetical protein TERM 2183 1987634 - 1987655 + g 72 -5.9 -4.2828 | opp_overlap 1987633, overlap 1987635 CCAGTTTGTTAAATT CGAAGCAAT TTTG ATTGCTTCA TTTTCCTCGATAAAA TERM 2184 1987635 - 1987654 + g 77 -9.4 -3.16647 | opp_overlap 1987633, overlap 1987634 CAGTTTGTTAAATTC GAAGCAAT TTTG ATTGCTTC ATTTTCCTCGATAAA TERM 2185 1987844 - 1987859 + r 70 -3.2 -5.36441 | TTGTTTAATGTTCAC TTGGGC CACC GCCAAA TTTTTTGTATGCCGC murE 1989317 - 1987833 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase SH1942 1989733 - 1990908 + | diacylglycerol glucosyltransferase SH1943 1990937 - 1992082 + | hypothetical protein TERM 2186 1992145 - 1992108 - T 95 -8.7 -4.99972 | opp_overlap 1992108 ATAAAACACTAAAAA TCTAGTTAATGTACA TCATACAC TGTACATTAGCTAGA TTTTTATTTTACATA TERM 2187 1992108 - 1992145 + T 100 -10.9 -5.48213 | opp_overlap 1992108 ATAAAACACTAAAAA TCTAGTTAATGTACA TCATACAC TGTACATTAGCTAGA TTTTTATTTTACATA SH1944 1992680 - 1992171 - | hypothetical protein SH1945 1993541 - 1992861 - | hypothetical protein TERM 2188 1994113 - 1994100 - g 81 -8.1 -4.10429 | AAGTATTCTTGAAAA GTGGG GTTT CCCAC GTTGGGCAAGTATCA SH1946 1993912 - 1994997 + | hypothetical protein TERM 2189 1995025 - 1995063 + T 100 -11.2 -4.84359 | opp_overlap 1995033, overlap 1995028 TTAAAAAACGTTTCA GTAGTGAACTTGAATTTA CAA TGCATTCAAGTTCACTTC TTTTTGTAAACATAA TERM 2190 1995028 - 1995060 + T 100 -11.5 -4.52873 | opp_overlap 1995033, overlap 1995025 AAAAACGTTTCAGTA GTGAACTTGAATTTA CAA TGCATTCAAGTTCAC TTCTTTTTGTAAACA TERM 2191 1995104 - 1995084 - T 100 -7.6 -5.88197 | opp_overlap 1995084 GTAAACATAAAAAAA CTTGGTGC TGTAC ACACCAAG TAATTGATTTAATTT fabI 1995891 - 1995121 - | enoyl-(acyl carrier protein) reductase TERM 2192 1996028 - 1996059 + r 100 -11 -4.70046 | opp_overlap 1996028 TGGTCATATAGGAAA TAGGCTGGGACA AAATAAAA TGTCTCAGCCTA TTTTATCATTTTGTC TERM 2193 1996059 - 1996028 - R 78 -8.8 -3.88498 | opp_overlap 1996028 TGGTCATATAGGAAA TAGGCTGGGACA AAATAAAA TGTCTCAGCCTA TTTTATCATTTTGTC TERM 2194 1996099 - 1996111 + r 89 -7.7 -5.02074 | CTGATTTGAAAATGC GCTTG AAT CAAGC TTTTTTCAAACCTAG SH1948 1998061 - 1996217 - | hypothetical protein SH1949 1999456 - 1998071 - | hypothetical protein SH1950 2000341 - 1999478 - | ibosomal large subunit pseudouridine synthase RluD subfamily protein TERM 2195 2000235 - 2000262 + g 73 -7 -4.08349 | opp_overlap 2000238, overlap 2000238 CTGTTATTAATAATT AAAGCGCCATTA TGTT TAATGGCGCTAA TTGTCTTTTTAGAAT TERM 2196 2000238 - 2000259 + g 88 -13.1 -3.06384 | opp_overlap 2000238, overlap 2000235 TTATTAATAATTAAA GCGCCATTA TGTT TAATGGCGC TAATTGTCTTTTTAG TERM 2197 2000259 - 2000238 - G 100 -13.1 -4.09805 | opp_overlap 2000235 2000238 TTATTAATAATTAAA GCGCCATTA TGTT TAATGGCGC TAATTGTCTTTTTAG ppnK 2001147 - 2000338 - | inorganic polyphosphate/ATP-NAD kinase SH1952 2001789 - 2001160 - | GTP pyrophosphokinase SH1953 2002153 - 2001806 - | hypothetical protein SH1954 2002399 - 2002980 + | hypothetical protein SH1955 2003068 - 2003433 + | hypothetical protein TERM 2198 2004219 - 2004204 - g 73 -4 -5.1286 | CAAAAAGTAGAAAAA CTTCAA TATC CTGAAG GAGATTTTTGGCAAT SH1956 2003457 - 2004254 + | hypothetical protein TERM 2199 2004269 - 2004305 + T 80 -7.5 -4.58943 | gap 1, opp_overlap 2004259 2004254 2004269 GGATAGCTAACAATA GCCATTCAATG-ATGA TTATAT TCATGCATTGGGTGGC TTGTTTTTGTGTACA TERM 2200 2004491 - 2004470 - T 100 -8 -5.70829 | AAGAGTATAAAAAAA CGCCGTGT CTGATT ACACGACG CTAAACAAAGGGGAT SH1957 2006470 - 2004662 - | thimet oligopeptidase SH1958 2007494 - 2006535 - | hypothetical protein TERM 2201 2007582 - 2007559 - H 100 -11.8 -5.47159 | TCTCAACACAAAAAA CCGAAGCAAT ATTC ATTGCCTCGG TAAAAATTTGGTTCT TERM 2202 2007597 - 2007643 + H 90 -8.4 -4.65895 | gap 1, opp_overlap 2007606, overlap 2007606 GTAAAAATTTGGTTC TATAATAAATTGGACTGATGA CAAAAT TCATCAGTCCAATTT-TCATG TTTTTGAATAGAAAA TERM 2203 2007606 - 2007635 + H 100 -13.8 -4.60746 | opp_overlap 2007606, overlap 2007597 TGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTCATGTTTTTGA TERM 2204 2007635 - 2007606 - H 100 -13.8 -4.30719 | opp_overlap 2007597 2007606 TGGTTCTATAATAAA TTGGACTGATGA CAAAAT TCATCAGTCCAA TTTTCATGTTTTTGA TERM 2205 2008076 - 2008060 - g 73 -4.5 -4.88918 | TTATTTCAAATAAAA CAAAACT TGC AGTTTTA AATAAAGCACAAGAA TERM 2206 2009043 - 2009013 - g 100 -16.4 -5.95946 | opp_overlap 2009011 2009021 2009022 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTAGGACTCAT tnp 2007723 - 2009039 + | transposase for ISSha1 SH1960 2009814 - 2009092 - | adaptor protein TERM 2207 2009976 - 2009958 - R 100 -11.8 -5.28176 | opp_overlap 2009958 TTGAGTTACAAAAAA CAGCACTA AAA TAGTGCTG TTTCATATTATTATA TERM 2208 2009958 - 2009976 + r 100 -11.8 -4.02742 | opp_overlap 2009958 TTGAGTTACAAAAAA CAGCACTA AAA TAGTGCTG TTTCATATTATTATA spxA 2010408 - 2010013 - | transcriptional regulator Spx trpS 2010697 - 2011686 + | tryptophanyl-tRNA synthetase TERM 2209 2011730 - 2011771 + F 95 -11.1 -4.44448 | opp_overlap 2011731 2011733, overlap 2011733 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 2210 2011770 - 2011731 - f 100 -12.4 -4.07562 | opp_overlap 2011730 2011733, overlap 2011733 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 2211 2011733 - 2011768 + F 100 -17.2 -4.33281 | opp_overlap 2011733 2011731, overlap 2011730 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 2212 2011768 - 2011733 - f 100 -15 -3.62348 | opp_overlap 2011730 2011733, overlap 2011731 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH1963 2011741 - 2011890 + | hypothetical protein TERM 2213 2012106 - 2012090 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 2214 2012860 - 2012874 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG tnp 2011974 - 2013581 + | IS1272 transposase TERM 2215 2013566 - 2013596 + F 100 -14.2 -5.20783 | opp_overlap 2013566 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2216 2013596 - 2013566 - f 100 -16.4 -4.30719 | opp_overlap 2013566 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2217 2013739 - 2013725 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 2218 2014970 - 2015002 + G 81 -10.7 -2.63089 | opp_overlap 2014971, overlap 2014969 2014967 GTCAACAACAAAAAA AGAGATTAAACAACC TAA GGTTGCTTAATCTCA ATATTTGGACTCATC TERM 2219 2015001 - 2014971 - g 100 -16.4 -5.95946 | opp_overlap 2014970 2014969 2014967 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTTGGACTCAT tnp 2013681 - 2014997 + | transposase for ISSha1 TERM 2220 2015097 - 2015065 - T 93 -8 -5.30686 | opp_overlap 2015065 AAGATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC TERM 2221 2015065 - 2015097 + T 95 -8 -5.55698 | opp_overlap 2015065 AAGATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTTCACTTATC SH1966 2016800 - 2015142 - | hypothetical protein TERM 2222 2016828 - 2016846 + r 76 -8.2 -3.70437 | overlap 2016825 CTCCTTCCCCTGCAT TTAAACGC TTT GCGTTTGA TGTTCTTGTTTTAAT oppF 2017772 - 2016828 - | oligopeptide transport system ATP-binding protein OppF oppD 2018844 - 2017765 - | oligopeptide ABC transporter ATP-binding protein SH1969 2019929 - 2018862 - | hypothetical protein oppB 2020855 - 2019929 - | oligopeptide transport system permease protein SH1971 2021127 - 2021483 + | hypothetical protein TERM 2223 2021497 - 2021545 + T 70 -5.4 -4.62872 | opp_overlap 2021503, overlap 2021498 2021500 2021502 2021505 AAATCATTCTACATA CAAAAATAGACCAAGGACATTA TCAAT TAGTGTCCTTGGTCTAATATCA TTTTTCAAAATTAAT TERM 2224 2021498 - 2021544 + T 79 -8.9 -3.37 | opp_overlap 2021503, overlap 2021497 2021500 2021502 2021505 AATCATTCTACATAC AAAAATAGACCAAGGACATTA TCAAT TAGTGTCCTTGGTCTAATATC ATTTTTCAAAATTAA TERM 2225 2021500 - 2021542 + T 93 -11.5 -3.24823 | opp_overlap 2021503, overlap 2021498 2021497 2021502 2021505 TCATTCTACATACAA AAATAGACCAAGGACATTA TCAAT TAGTGTCCTTGGTCTAATA TCATTTTTCAAAATT TERM 2226 2021502 - 2021540 + T 100 -14.1 -3.18031 | opp_overlap 2021503, overlap 2021500 2021498 2021497 2021505 ATTCTACATACAAAA ATAGACCAAGGACATTA TCAAT TAGTGTCCTTGGTCTAA TATCATTTTTCAAAA TERM 2227 2021539 - 2021503 - T 100 -15.4 -5.03994 | opp_overlap 2021502 2021500 2021498 2021497 2021505 TTCTACATACAAAAA TAGACCAAGGACATTA TCAAT TAGTGTCCTTGGTCTA ATATCATTTTTCAAA TERM 2228 2021505 - 2021537 + T 100 -15.8 -2.78025 | opp_overlap 2021503, overlap 2021502 2021500 2021498 2021497 CTACATACAAAAATA GACCAAGGACATTA TCAAT TAGTGTCCTTGGTC TAATATCATTTTTCA fab 2022800 - 2021556 - | 3-oxoacyl-[acyl-carrier-protein] synthase fabH 2023755 - 2022814 - | 3-oxoacyl-(acyl carrier protein) synthase III SH1974 2023961 - 2024155 + | hypothetical protein TERM 2229 2024191 - 2024227 + T 100 -11.1 -5.10064 | opp_overlap 2024182 2024177 2024191 2024193 ACAATACGTTAAAAA CGCTTGGAATTTGAATT TAA AACTCAAATTTCAAGTG TTTTTCTATATTAAA TERM 2230 2024227 - 2024191 - T 93 -8.9 -4.67556 | opp_overlap 2024191, overlap 2024182 2024177 2024193 ACAATACGTTAAAAA CGCTTGGAATTTGAATT TAA AACTCAAATTTCAAGTG TTTTTCTATATTAAA TERM 2231 2024225 - 2024193 - T 78 -10.1 -2.62946 | opp_overlap 2024191, overlap 2024177 2024191 AATACGTTAAAAACG CTTGGAATTTGAATT TAA AACTCAAATTTCAAG TGTTTTTCTATATTA TERM 2232 2024432 - 2024404 - T 95 -8.2 -5.53288 | opp_overlap 2024404 CTGAACTTAAAAAAA CCTAGAAAGTGC TCATC ACACTCCCTAGG TTTACCTAAACATTC SH1975 2027058 - 2024449 - | hypothetical protein TERM 2233 2027345 - 2027307 - R 100 -14.2 -4.91429 | opp_overlap 2027314, overlap 2027311 AAACTGCAAATAAAA TAAACCAGTTCAATGATT TAA AATCACTAAACTGGTCTA GAATGAATTATTTGT TERM 2234 2027341 - 2027311 - R 100 -12.8 -4.96996 | opp_overlap 2027314, overlap 2027307 TGCAAATAAAATAAA CCAGTTCAATGATT TAA AATCACTAAACTGG TCTAGAATGAATTAT SH1976 2029179 - 2027353 - | hypothetical protein TERM 2235 2029610 - 2029582 - R 100 -6.2 -6.02919 | opp_overlap 2029585 TTATAAATAAAAAAA CAATAGTACA TCCTAATCG TGTACTATTG TTCAAAAGCGATTAA SH1977 2029934 - 2029626 - | hypothetical protein SH1978 2030135 - 2030959 + | hypothetical protein cdr 2031041 - 2032363 + | coenzyme A disulfide reductase TERM 2236 2032411 - 2032367 - T 78 -6 -4.90455 | opp_overlap 2032403, overlap 2032368 AGAGATTTATAAAAA GTAGCCCTTAAATGAT TACTGCAAATTCG ATCATTTAAGGGCTAT CCCTATATCATTAAT TERM 2237 2032410 - 2032368 - T 84 -9.5 -3.53188 | opp_overlap 2032403, overlap 2032367 GAGATTTATAAAAAG TAGCCCTTAAATGAT TACTGCAAATTCG ATCATTTAAGGGCTA TCCCTATATCATTAA SH1980 2032838 - 2032437 - | hypothetical protein SH1981 2033026 - 2032940 - | hypothetical protein TERM 2238 2033148 - 2033112 - R 74 -8.1 -3.68292 | gap 1, opp_overlap 2033112 2033139, overlap 2033115 2033117 ATTGGCAATATATAA TTAGAGCCTGGGACAT TGATTT ATGCCCCAGGCTC-AC CTGCATTTACTGATT TERM 2239 2033146 - 2033115 - R 100 -16.7 -2.94695 | opp_overlap 2033112 2033139, overlap 2033112 2033117 GGCAATATATAATTA GAGCCTGGGACAT TGATTT ATGCCCCAGGCTC ACCTGCATTTACTGA TERM 2240 2033144 - 2033117 - R 100 -13.5 -3.01979 | opp_overlap 2033112 2033139, overlap 2033115 2033112 CAATATATAATTAGA GCCTGGGACAT TGATTT ATGCCCCAGGC TCACCTGCATTTACT SH1982 2034167 - 2033262 - | hypothetical protein SH1983 2037970 - 2034293 - | hypothetical protein SH1984 2041451 - 2037963 - | hypothetical protein TERM 2241 2039436 - 2039449 + g 82 -3.1 -5.73978 | CAACCCTTGTATTTG GTCTA TAAA TGGAC TTTTTTCTTTATCCT TERM 2242 2039679 - 2039690 + g 82 -3 -5.60689 | ATCGTTCATTCCAAC CATA TAAA TATG TTTTTTATTGTCTAC spsB 2042186 - 2041614 - | type-1 signal peptidase 1B spsA 2042725 - 2042201 - | type-I signal peptidase TERM 2243 2042559 - 2042574 + g 72 -4.8 -4.73613 | overlap 2042548 2042558 CCATCCTTCAACATG TTAAAG GTAA CTTTAA TTTTATTAATAATGA SH1987 2043302 - 2042730 - | hypothetical protein TERM 2244 2043199 - 2043185 - G 77 -5.8 -4.6955 | CATGAACACATAAAA TAACAT ACA ATGTTA AAGGAAGTACTGGCA TERM 2245 2043488 - 2043461 - R 100 -10.7 -4.53765 | opp_overlap 2043461 ATATATATTAGAAAA GTCGATACGGA ATTTAA TCCATATCGAC TTTGTAAGACATATT TERM 2246 2043461 - 2043488 + r 78 -8.5 -3.87641 | opp_overlap 2043461 ATATATATTAGAAAA GTCGATACGGA ATTTAA TCCATATCGAC TTTGTAAGACATATT pgi 2044863 - 2043532 - | glucose-6-phosphate isomerase argG 2045197 - 2046399 + | argininosuccinate synthase argH 2046392 - 2047774 + | argininosuccinate lyase glpQ 2047962 - 2048924 + | glycerophosphoryl diester phosphodiesterase TERM 2247 2049052 - 2049015 - T 100 -9.4 -5.54338 | opp_overlap 2049015 GAATCAAAACAAAAA CGCTATAACTTGTT TCATTCCCAT AACAAGCTATAGCG TTTATTTATGTTTAT TERM 2248 2049015 - 2049052 + T 81 -7.2 -4.74787 | opp_overlap 2049015 GAATCAAAACAAAAA CGCTATAACTTGTT TCATTCCCAT AACAAGCTATAGCG TTTATTTATGTTTAT gudB 2050326 - 2049076 - | NAD-specific glutamate dehydrogenase rocD 2051618 - 2050428 - | ornithine--oxo-acid transaminase TERM 2249 2051908 - 2051881 - R 100 -7.9 -6.30182 | opp_overlap 2051881 2051879 TTACATAAAAAAAAA GATTATGACAA GAATGA TTGCCATAATC TATTATAAACTCTAA SH1994 2053157 - 2052030 - | hypothetical protein TERM 2250 2053313 - 2053284 - R 100 -15.3 -5.33866 | opp_overlap 2053289 2053307 CAAACGCATAAAAAA GCTAACGTTATAT TAAA ATATAACGTTAGC TTAGCGTGTTAACAG TERM 2251 2053289 - 2053308 + r 71 -8 -3.19018 | opp_overlap 2053284, overlap 2053307 GCATAAAAAAGCTAA CGTTATAT TAAA ATATAACG TTAGCTTAGCGTGTT SH1995 2053713 - 2053333 - | hypothetical protein SH1996 2053956 - 2053777 - | hypothetical protein TERM 2252 2053936 - 2053912 - G 100 -10.8 -5.75599 | TAAACCATAAAAAAA CGAATCGACA TCAAC CGTCGATTCG AAAGATTTGTTCATA SH1997 2054556 - 2053960 - | peptidyl-prolyl cis-trans isomerase SH1998 2054625 - 2055005 + | hypothetical protein TERM 2253 2056924 - 2056967 + G 72 -6 -4.40221 | TTAGTCATTATATTC GGTATGCTTATTGTCGTTAC GATT GTGACGCTACTAAGCGTTCC TTTTGACTTTAATTT mnhA 2055139 - 2057550 + | monovalent cation/H+ antiporter subunit A mnhB 2057531 - 2057959 + | putative monovalent cation/H+ antiporter subunit B mnhC 2057959 - 2058300 + | putative monovalent cation/H+ antiporter subunit C TERM 2254 2059018 - 2059030 + G 84 -6.3 -5.15634 | TTATGCACCACCATT TGCAA TCA TTGCA TTTTTTGGTGCCCTA mnhD 2058293 - 2059792 + | putative monovalent cation/H+ antiporter subunit D mnhE 2059792 - 2060271 + | putative monovalent cation/H+ antiporter subunit E mnhF 2060271 - 2060561 + | putative monovalent cation/H+ antiporter subunit F mnhG 2060539 - 2060895 + | putative monovalent cation/H+ antiporter subunit G TERM 2255 2060965 - 2061003 + F 100 -16.8 -5.9218 | opp_overlap 2060962 2060961 2060976 TCAAGTCACAATTGC GGGTGGAGACAGAATTCA AAA TGATTTCTGTCCCCGCCC TTTTTTTATTGTCTA TERM 2256 2061045 - 2061057 + F 70 -6.3 -4.07568 | opp_overlap 2061044 2061040 2061038 TATGATAATATAAAT CGTAA TTA TTACG TTTTAAAAAGAAAGA TERM 2257 2062056 - 2062044 - g 73 -4.1 -4.90869 | ATCATTAATTAAAAA TGAAG ATG CTCCA TTAACACGCTGTGGA SH2006 2061082 - 2062248 + | hypothetical protein TERM 2258 2062326 - 2062374 + T 71 -2.5 -5.4505 | gap 2, opp_overlap 2062327, overlap 2062327 TATTTCTTATAAAAA AGCAGGCGTAGGAT--AGAATTC TTTAT GAATTCACCGTCCCACGCCTGCG TTTTTTCTTAAACAA TERM 2259 2062373 - 2062327 - T 93 -8.2 -5.24531 | gap 2, opp_overlap 2062327 2062326 ATTTCTTATAAAAAA GCAGGCGTAGGA-TA-GAATTC TTTAT GAATTCACCGTCCCACGCCTGC GTTTTTTCTTAAACA SH2007 2062829 - 2062452 - | hypothetical protein SH2008 2064171 - 2062852 - | hypothetical protein TERM 2260 2062934 - 2062913 - G 74 -5.9 -4.55093 | opp_overlap 2062913 TTATAGAATAAGAAA TTCGGGATA CATG TATCGCGAA TATGATCATGCTGTC TERM 2261 2064336 - 2064295 - R 93 -11.1 -3.73953 | overlap 2064265 2064298 ATTATGCTTATTAAA TAAGGAGTATAAACACGCA ATAG CACATGTTTCTACTCCTTA AGCAAATGATTTCTA TERM 2262 2064333 - 2064298 - R 80 -8.4 -4.0031 | overlap 2064265 2064295 ATGCTTATTAAATAA GGAGTATAAACACGCA ATAG CACATGTTTCTACTCC TTAAGCAAATGATTT ampA 2065830 - 2064361 - | cytosol aminopeptidase TERM 2263 2065907 - 2065867 - R 100 -12.2 -4.39748 | gap 2, opp_overlap 2065877 2065878, overlap 2065864 TATCATATAAAAGAA GGAGTGGAAC-A-GAATTCA CAA TGAATTCGTTGTTCCACCCC CATAAGGATAACTAG SH2010 2067249 - 2066041 - | hypothetical protein SH2011 2067974 - 2067615 - | hypothetical protein SH2012 2068232 - 2067987 - | hypothetical protein SH2013 2068585 - 2069649 + | hypothetical protein TERM 2264 2069656 - 2069704 + T 100 -11.9 -5.24531 | opp_overlap 2069658 2069661, overlap 2069657 2069658 AACGGTTAGTATTAA AATAAGGGGTAGAATAGAATTCA TGA TGAATTCTATTCTACCCCCGACC TTTTTTCTCAAGAAT TERM 2265 2069657 - 2069703 + T 100 -15.4 -3.73995 | opp_overlap 2069658 2069661, overlap 2069656 2069658 ACGGTTAGTATTAAA ATAAGGGGTAGAATAGAATTCA TGA TGAATTCTATTCTACCCCCGAC CTTTTTTCTCAAGAA TERM 2266 2069702 - 2069658 - T 100 -21.1 -4.30576 | opp_overlap 2069657 2069656 2069658, overlap 2069661 CGGTTAGTATTAAAA TAAGGGGTAGAATAGAATTCA TGA TGAATTCTATTCTACCCCCGA CCTTTTTTCTCAAGA TERM 2267 2069658 - 2069702 + T 100 -18.9 -2.83915 | opp_overlap 2069658 2069661, overlap 2069657 2069656 CGGTTAGTATTAAAA TAAGGGGTAGAATAGAATTCA TGA TGAATTCTATTCTACCCCCGA CCTTTTTTCTCAAGA TERM 2268 2069699 - 2069661 - T 100 -25 -4.27443 | opp_overlap 2069658 2069657 2069656, overlap 2069658 TTAGTATTAAAATAA GGGGTAGAATAGAATTCA TGA TGAATTCTATTCTACCCC CGACCTTTTTTCTCA SH2014 2070051 - 2069731 - | hypothetical protein TERM 2269 2070202 - 2070217 + G 71 -3.2 -5.11063 | AGTAGCTGAAGTCAT TGAACG TTTA CGTCCA TTTTTATTACGTGAT nifU 2070155 - 2070397 + | nitrogen fixation protein NifU TERM 2270 2070464 - 2070505 + F 95 -11.1 -4.44448 | opp_overlap 2070465 2070467, overlap 2070467 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 2271 2070504 - 2070465 - f 100 -12.4 -4.07562 | opp_overlap 2070464 2070467, overlap 2070467 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 2272 2070502 - 2070467 - f 100 -15 -3.62348 | opp_overlap 2070467 2070464, overlap 2070465 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 2273 2070467 - 2070502 + F 100 -17.2 -4.33281 | opp_overlap 2070465 2070467, overlap 2070464 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH2016 2070475 - 2070624 + | hypothetical protein TERM 2274 2070840 - 2070824 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 2275 2071594 - 2071608 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 2276 2072336 - 2072304 - g 90 -8 -5.35222 | opp_overlap 2072304 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC TERM 2277 2072304 - 2072336 + G 90 -8 -5.1925 | opp_overlap 2072304 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC tnp 2070708 - 2072390 + | IS1272 transposase dltD 2073581 - 2072391 - | poly D-alanine transfer protein dltC 2073814 - 2073578 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 2075044 - 2073830 - | DltB membrane protein dltA 2076498 - 2075041 - | D-alanine--D-alanyl carrier protein ligase SH2022 2076662 - 2076513 - | hypothetical protein TERM 2278 2077079 - 2077022 - R 82 -9.5 -3.36175 | gap 1, opp_overlap 2077022 2077027, overlap 2077027 AACTGTTAGTTATAA TAAAAGAACCTCTATCGTTCATGGTTAA ATC TTTACC-TAAACGTTAGAAGTTCTTTAA AATTTATTTATTAGT TERM 2279 2077074 - 2077027 - R 100 -9.4 -4.79352 | gap 1, opp_overlap 2077022 2077027, overlap 2077022 TTAGTTATAATAAAA GAACCTCTATCGTTCATGGTTAA ATC TTTACC-TAAACGTTAGAAGTTC TTTAAAATTTATTTA SH2023 2078048 - 2077083 - | hypothetical protein SH2024 2078858 - 2078067 - | hypothetical protein SH2025 2079292 - 2078858 - | hypothetical protein SH2026 2079395 - 2079661 + | hypothetical protein TERM 2280 2079713 - 2079676 - T 91 -10.1 -4.15833 | opp_overlap 2079674 2079676 ATTACTATTTTAAAA GCTGTGAAAAAATCC CTTATCTT AGATTTCTTCACAGC TCATTTTATTTATTA SH2027 2080126 - 2079734 - | hypothetical protein TERM 2281 2079941 - 2079924 - G 71 -8.5 -3.07501 | opp_overlap 2079918 2079917 2079924 ATATAATCTTGAATA CTCGAAA AACG TTTCGAG ATTTCAGCTTTTTTA TERM 2282 2080202 - 2080152 - R 90 -10.8 -3.33261 | opp_overlap 2080158, overlap 2080158 CTTTAACTCGTATAA TAAAAACTTAGATTACACAATTCA ATT TAAAATGTGCAACCTAAGTCTCTA AAAACTTAATCTAAA TERM 2283 2080196 - 2080158 - R 100 -9.8 -5.18726 | opp_overlap 2080158, overlap 2080152 CTCGTATAATAAAAA CTTAGATTACACAATTCA ATT TAAAATGTGCAACCTAAG TCTCTAAAAACTTAA TERM 2284 2080258 - 2080270 + r 77 -4.8 -5.27335 | GTTGTAATTTTTCTT CACC TAGAC GGTG TTTTTCTTTAGCCGC lipA 2081161 - 2080235 - | lipoyl synthase SH2029 2082610 - 2081288 - | hypothetical protein SH2030 2083460 - 2082633 - | hypothetical protein SH2031 2084322 - 2083474 - | hypothetical protein SH2032 2085520 - 2084447 - | hypothetical protein TERM 2285 2085677 - 2085635 - R 77 -5.2 -5.03145 | gap 2, opp_overlap 2085640, overlap 2085640 TAATTTTTGAAAAAA TAAAAGCAAGGACTGAACTT ATGTA AAGTT-AG-CCTTGCTTATA AAATGATGATTTTAC TERM 2286 2085672 - 2085640 - R 79 -5.1 -5.42198 | gap 2, opp_overlap 2085640, overlap 2085635 TTTGAAAAAATAAAA GCAAGGACTGAACTT ATGTA AAGTT-AG-CCTTGC TTATAAAATGATGAT tnp 2086934 - 2085762 - | transposase for IS256 SH2034 2087827 - 2087147 - | hypothetical protein TERM 2287 2087991 - 2087955 - R 86 -6 -5.4251 | TTGAGATATAAAAAA GCACCAAAGCATTC ACTTAGTTA GAACACTTTGGTAC TTGTGATTGTTATTA SH2035 2089431 - 2088034 - | hypothetical protein TERM 2288 2089064 - 2089089 + g 77 -4.8 -5.10208 | ACAACTTCTGATTCA TATTGAGCAG AAACAC CTGCTAAATA TTTTTGTTCAGCTTC nifU 2090072 - 2089611 - | hypothetical protein TERM 2289 2089952 - 2089940 - G 77 -9.1 -3.1996 | opp_overlap 2089935 CAAACGTTAATCTAA TGCGG TCA CCGCA AGTAGGATTGTTCAT SH2037 2091303 - 2090062 - | hypothetical protein SH2038 2092660 - 2091353 - | hypothetical protein SH2039 2093599 - 2092838 - | ABC transporter ATP-binding protein TERM 2290 2092937 - 2092951 + g 75 -7.2 -4.11805 | AACTACTTTACCACC GTACAT AAC ATGTAC TTTGTCTGGTGTGAT TERM 2291 2093773 - 2093783 + H 74 -4 -5.24531 | TAAAATAATTTTTAT TTGA TAC TCAA TTTTTTCTCGCAACT SH2040 2093954 - 2094805 + | hypothetical protein TERM 2292 2094843 - 2094872 + T 95 -8.5 -5.1167 | opp_overlap 2094843 ATATTTATAATGAAA CGGACCCATAAGG TTAA TCTAATGGGCCCG TTTTTCTGTTAAATT TERM 2293 2094872 - 2094843 - T 91 -10 -4.0127 | opp_overlap 2094843 ATATTTATAATGAAA CGGACCCATAAG GTTAAT CTAATGGGCCCG TTTTTCTGTTAAATT tnp 2096575 - 2094893 - | IS1272 transposase TERM 2294 2094947 - 2094979 + g 90 -8 -5.35222 | opp_overlap 2094947 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 2295 2094979 - 2094947 - G 93 -8 -5.55698 | opp_overlap 2094947 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 2296 2095689 - 2095675 - G 77 -5.8 -4.75289 | CATTATAAGATAAAA CAAATT GGG AATTTG TCGCTATTTGTAAAT TERM 2297 2096443 - 2096459 + g 70 -8.1 -3.32066 | CACCACGGTGATGTC TGAATTC GTC GAATTCA TTGTCAGGAATTGTT SH2042 2096808 - 2096659 - | hypothetical protein TERM 2298 2096819 - 2096778 - G 100 -11.1 -4.44448 | opp_overlap 2096779 2096781, overlap 2096781 AGTATTGTAAATAAA GAAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTAT TTCTCTAGGGTTTAT TERM 2299 2096779 - 2096818 + g 100 -12.4 -4.07562 | opp_overlap 2096778 2096781, overlap 2096781 GTATTGTAAATAAAG AAGCCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTA TTTCTCTAGGGTTTA TERM 2300 2096781 - 2096816 + g 100 -15 -3.62348 | opp_overlap 2096778 2096781, overlap 2096779 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT TERM 2301 2096816 - 2096781 - G 100 -17.2 -4.33281 | opp_overlap 2096781 2096779, overlap 2096778 ATTGTAAATAAAGAA GCCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT SH2043 2097057 - 2096863 - | hypothetical protein SH2044 2097226 - 2097390 + | hypothetical protein TERM 2302 2097434 - 2097392 - T 100 -14.4 -3.57309 | opp_overlap 2097397 2097401, overlap 2097384 2097395 2097397 2097401 GAAAATCTTTCTAAA TAATAGAAACTCCGTAATCA AAA TGGTTACGGAGTTTCTTTCA TTATTATTTCGCTGG TERM 2303 2097431 - 2097395 - T 100 -13.9 -3.91488 | opp_overlap 2097397 2097401, overlap 2097384 2097392 2097397 2097401 AATCTTTCTAAATAA TAGAAACTCCGTAATCA AAA TGGTTACGGAGTTTCTT TCATTATTATTTCGC TERM 2304 2097397 - 2097429 + T 100 -18.7 -4.17355 | opp_overlap 2097384 2097395 2097392 2097397 2097401, overlap 2097401 TCTTTCTAAATAATA GAAACTCCGTAATCA AAA TGGTTACGGAGTTTC TTTCATTATTATTTC TERM 2305 2097429 - 2097397 - T 100 -16.5 -3.54488 | opp_overlap 2097397 2097401, overlap 2097384 2097395 2097392 2097401 TCTTTCTAAATAATA GAAACTCCGTAATCA AAA TGGTTACGGAGTTTC TTTCATTATTATTTC TERM 2306 2097425 - 2097401 - T 95 -11.5 -4.40333 | opp_overlap 2097397 2097401, overlap 2097397 2097395 2097392 TCTAAATAATAGAAA CTCCGTAATCA AAA TGGTTACGGAG TTTCTTTCATTATTA TERM 2307 2097401 - 2097425 + T 100 -13.7 -4.62392 | opp_overlap 2097401 2097397 2097395 2097392, overlap 2097397 TCTAAATAATAGAAA CTCCGTAATCA AAA TGGTTACGGAG TTTCTTTCATTATTA SH2045 2098253 - 2097438 - | hypothetical protein TERM 2308 2097480 - 2097494 + g 70 -7.2 -3.80625 | ATATTTGTCTTTAAT GAAATC TTG GATTTC TTTAGATTGTAACAC SH2046 2098969 - 2098274 - | hypothetical protein SH2047 2099987 - 2098962 - | ABC transporter ATP-binding protein TERM 2309 2100058 - 2100027 - R 100 -12.6 -5.28481 | gap 1, opp_overlap 2100023 2100019 2100017 2100027 2100050 TATGTAATTAAAAAA TGCTTTCTC-ACTTT AGC AAAGTTGAGAAAGCA TTGATTCATCTTTCT TERM 2310 2100027 - 2100058 + r 100 -12.6 -3.48558 | gap 1, opp_overlap 2100027, overlap 2100023 2100019 2100017 2100050 TATGTAATTAAAAAA TGCTTTCTC-ACTTT AGC AAAGTTGAGAAAGCA TTGATTCATCTTTCT SH2048 2100154 - 2100011 - | hypothetical protein SH2049 2100531 - 2100235 - | hypothetical protein SH2050 2100910 - 2100524 - | hypothetical protein TERM 2311 2101091 - 2101070 - R 79 -5.1 -5.48213 | opp_overlap 2101070 TAGGCAAAATAAAAA CTCCATGAC CGCA ATCAAGGAG TTTAAATTAATTATT SH2051 2101482 - 2101102 - | glycine cleavage system protein H SH2052 2101951 - 2101598 - | hypothetical protein SH2053 2102093 - 2102416 + | hypothetical protein TERM 2312 2102538 - 2102584 + T 93 -11.2 -3.60884 | gap 1, opp_overlap 2102542 2102546, overlap 2102539 2102542 2102546 AGCTATGCCCGTGTA ATAATAAAGACGGTTGAGACA TTTATT TGTC-CAGCCGTCTTTATTAA TTCTAGTATTTTGAA TERM 2313 2102539 - 2102583 + T 100 -14.7 -2.75807 | gap 1, opp_overlap 2102542 2102546, overlap 2102538 2102542 2102546 GCTATGCCCGTGTAA TAATAAAGACGGTTGAGACA TTTATT TGTC-CAGCCGTCTTTATTA ATTCTAGTATTTTGA TERM 2314 2102542 - 2102580 + T 95 -12 -3.50454 | gap 1, opp_overlap 2102542 2102546, overlap 2102539 2102538 2102546 ATGCCCGTGTAATAA TAAAGACGGTTGAGACA TTTATT TGTC-CAGCCGTCTTTA TTAATTCTAGTATTT TERM 2315 2102580 - 2102542 - T 86 -9.8 -3.61517 | gap 1, opp_overlap 2102542 2102539 2102538 2102546, overlap 2102546 ATGCCCGTGTAATAA TAAAGACGGTTGAGACA TTTATT TGTC-CAGCCGTCTTTA TTAATTCTAGTATTT TERM 2316 2102576 - 2102546 - T 74 -6.2 -4.44667 | gap 1, opp_overlap 2102542 2102539 2102538 2102546, overlap 2102542 CCGTGTAATAATAAA GACGGTTGAGACA TTTATT TGTC-CAGCCGTC TTTATTAATTCTAGT TERM 2317 2102546 - 2102576 + T 83 -8.4 -4.37199 | gap 1, opp_overlap 2102546 2102542, overlap 2102542 2102539 2102538 CCGTGTAATAATAAA GACGGTTGAGACA TTTATT TGTC-CAGCCGTC TTTATTAATTCTAGT SH2054 2103126 - 2102587 - | hypothetical protein SH2055 2103922 - 2103197 - | 3-dehydroquinate dehydratase SH2056 2104085 - 2104507 + | hypothetical protein TERM 2318 2104536 - 2104572 + F 100 -6.7 -5.68039 | opp_overlap 2104543, overlap 2104539 CATGTACTAATAATT TTAGACACAAAAATCTT TTA GGGATTTTTGTGTCTTC TTTTTTTGTGAATTT TERM 2319 2104539 - 2104569 + F 100 -12.8 -4.89054 | opp_overlap 2104543, overlap 2104536 GTACTAATAATTTTA GACACAAAAATCTT TTA GGGATTTTTGTGTC TTCTTTTTTTGTGAA SH2057 2104770 - 2105261 + | hypothetical protein SH2058 2105393 - 2106010 + | hypothetical protein TERM 2320 2106035 - 2106083 + T 100 -12.7 -4.51238 | opp_overlap 2106033 2106030 2106054, overlap 2106036 CTTAATTATAGTAGT AGGCTAGAACTTAAAATAACTTA TCA TAAGTGTTTTTAGGTTCTAGCCA TTTCTGTTTTGTAGA TERM 2321 2106036 - 2106082 + T 100 -16.2 -3.29658 | opp_overlap 2106033 2106030 2106054, overlap 2106035 TTAATTATAGTAGTA GGCTAGAACTTAAAATAACTTA TCA TAAGTGTTTTTAGGTTCTAGCC ATTTCTGTTTTGTAG TERM 2322 2106142 - 2106115 - T 100 -10 -5.54079 | opp_overlap 2106114 2106112 TTAAAAAGGAAAAAA TCTCTACAAGTA ATTG TCCTTGTAGAGA ATGTTGAGTTAATAT SH2059 2106805 - 2106197 - | hypothetical protein SH2060 2107033 - 2107275 + | hypothetical protein TERM 2323 2107797 - 2107825 + F 100 -11.2 -5.03994 | gap 1 TTATAAGGGATGTTG TGTCAACCG-CTT CATT AAGTCGGTTGACA TTTTTGTATATAAAG SH2061 2108021 - 2108278 + | hypothetical protein SH2062 2108301 - 2108489 + | hypothetical protein TERM 2324 2108502 - 2108529 + F 95 -5.8 -5.76237 | gap 1, opp_overlap 2108502 TAGCGTAGAATTAAA GAACAAAA-TGAC ATT GTTATTTTTGTTC TTTTTTATTTATATC SH2063 2108607 - 2109188 + | hypothetical protein TERM 2325 2109227 - 2109205 - f 93 -9.2 -4.81551 | opp_overlap 2109205 TATCTATAGTAAAAA GAGTAGCTTT GAA ATAGCTACTC TTTTTTAGTTAGACA TERM 2326 2109205 - 2109227 + F 100 -9.2 -5.26875 | opp_overlap 2109205 TATCTATAGTAAAAA GAGTAGCTTT GAA ATAGCTACTC TTTTTTAGTTAGACA SH2064 2109642 - 2109824 + | hypothetical protein SH2065 2109839 - 2109943 + | hypothetical protein SH2066 2110057 - 2110389 + | hypothetical protein TERM 2327 2110405 - 2110460 + T 100 -13.1 -4.68479 | gap 3, opp_overlap 2110422 TAAAGTTCATGGACT TAGAGAGAGGCA-AG-C-TATCACATGT TAA ATATGTGATGTGACTATGCCTCTCTCTA TTTTACTTCTTTTCT SH2067 2111066 - 2110458 - | hypothetical protein SH2068 2111203 - 2111949 + | hypothetical protein SH2069 2112025 - 2112312 + | hypothetical protein TERM 2328 2112485 - 2112530 + F 77 -5 -5.26119 | gap 2, opp_overlap 2112485, overlap 2112486 TACAAGCAAAGCAAG TTGGGAGTGGGACGATGAATTT AAAA AAATTC-TA-TCCTACTCCCAG TTTTATTTTTACGAA SH2070 2112558 - 2112782 + | hypothetical protein SH2071 2112910 - 2113641 + | hypothetical protein TERM 2329 2113683 - 2113717 + F 100 -9.5 -5.38497 | gap 1 TAATTCAATTACTTT TACCGGGATAA-TCAA CTTT TCGACTTATCCCGGTA TTTTTTAATTTAAAT SH2072 2113840 - 2114016 + | hypothetical protein TERM 2330 2114104 - 2114072 - T 84 -10.7 -2.63089 | opp_overlap 2114073, overlap 2114071 2114069 GATGAGTCCAAATAT TGAGATTAAGCAACC TTA GGTTGTTTAATCTCT TTTTTTGTTGTTGAG TERM 2331 2114073 - 2114103 + T 100 -16.4 -5.95946 | opp_overlap 2114072 2114071 2114069 ATGAGTCCAAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 2115393 - 2114077 - | transposase for ISSha1 TERM 2332 2115335 - 2115349 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 2333 2115508 - 2115478 - R 100 -14.2 -5.20783 | opp_overlap 2115478 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCG TERM 2334 2115478 - 2115508 + r 100 -16.4 -4.30719 | opp_overlap 2115478 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCG SH2074 2115715 - 2115602 - | hypothetical protein TERM 2335 2116037 - 2116013 - R 100 -13 -4.64144 | opp_overlap 2116013 AAGAATCTTTAAAAA GCGTTAGAAC CTTTC GTTCTAACGC TTCGTCTACATTTAT TERM 2336 2116013 - 2116037 + r 100 -13 -3.31598 | opp_overlap 2116013 AAGAATCTTTAAAAA GCGTTAGAAC CTTTC GTTCTAACGC TTCGTCTACATTTAT TERM 2337 2116146 - 2116124 - R 100 -11.4 -4.86621 | opp_overlap 2116124 ACCGTTAACTAAAAA GAGAACAAGT CCT ACTTGCTCTC TTTCCTAAGTTATTT TERM 2338 2116124 - 2116146 + r 82 -9.2 -3.82531 | opp_overlap 2116124 ACCGTTAACTAAAAA GAGAACAAGT CCT ACTTGCTCTC TTTCCTAAGTTATTT SH2075 2117340 - 2116324 - | hypothetical protein TERM 2339 2117430 - 2117462 + r 86 -9.4 -3.87373 | opp_overlap 2117430 TGCATATGTAAAAAA GAGATATGACTAAT CACTC ATTAATCATATCTC TTTATCAACACTATG TERM 2340 2117462 - 2117430 - R 100 -11.6 -5.1287 | opp_overlap 2117430 TGCATATGTAAAAAA GAGATATGACTAAT CACTC ATTAATCATATCTC TTTATCAACACTATG TERM 2341 2117669 - 2117647 - R 100 -10.7 -5.8901 | opp_overlap 2117646 ATACAAAACAAAAAA CCTATAACC ACAAG GGTTATAGG CTATATAGTGGAGAC SH2076 2118271 - 2117855 - | hypothetical protein SH2077 2118940 - 2118482 - | hypothetical protein TERM 2342 2119040 - 2119022 - R 100 -11 -6.02919 | TTATAAACAAAAAAA CGCCACTC AAT GAGTGACG CTTGAAACGAATTAT SH2078 2120118 - 2119180 - | hypothetical protein TERM 2343 2119759 - 2119774 + g 71 -3.4 -5.1287 | ACCAGTATAGTTCAA TATATT CCTC AATATA TTTTTTGAGTCTGAA SH2079 2120772 - 2120119 - | hypothetical protein TERM 2344 2120470 - 2120482 + gr 74 -3.3 -5.26247 | opp_overlap 2120471, overlap 2120471 GCTCTTTATATATAA AGGAG TAT CTCCA TTTTGTTTATTTTCA TERM 2345 2120481 - 2120471 - GR 72 -6.8 -4.12532 | opp_overlap 2120471 2120470 CTCTTTATATATAAA GGAG TAT CTCC ATTTTGTTTATTTTC SH2080 2121211 - 2120732 - | hypothetical protein SH2081 2121484 - 2121362 - | hypothetical protein SH2082 2121645 - 2121550 - | hypothetical protein TERM 2346 2121921 - 2121947 + H 93 -10.3 -4.62069 | opp_overlap 2121921, overlap 2121918 TTTCGTTGAAACTTA GTCTTACTAGT CATGT ACTAGTGAGAC TTTTTCGCATACAAA TERM 2347 2121977 - 2121965 - H 80 -6.2 -4.96848 | TTTCGCATACAAAAA GGGC TTTAC GCCC CTAAAGAGTTATGCT SH2083 2121988 - 2122143 + | hypothetical protein TERM 2348 2122170 - 2122150 - T 72 -3.3 -5.22006 | CTATTATAATAAAAA TCATTGCTT TGT ATGCAATAA AGTAATAAATACGTT TERM 2349 2122282 - 2122263 - T 86 -5.7 -5.47218 | TTTTATGCAAAAAAA GCTAACC AGTTAA GGCTAGC CCCTATGTAATCGAG TERM 2350 2122417 - 2122397 - T 100 -7.5 -5.62288 | GCAATAAAATAAAAA GCTATGCCC AAT GGACGTAGC AAAGAAAAAATGAAT TERM 2351 2122647 - 2122625 - T 100 -12.8 -5.38958 | opp_overlap 2122624 2122623 2122627 AGTTATAAATAAAAA GACTGTACCC AAC GGATACAGTC AGTTTATTAAAGGAT TERM 2352 2122838 - 2122815 - T 100 -9.6 -5.4492 | TATATACATAAAAAA CGTCAAACCT ATTA AGGCCTGACG CTATACATTTGAATA SH2084 2123502 - 2122930 - | hypothetical protein SH2085 2123842 - 2123513 - | hypothetical protein SH2086 2124276 - 2123839 - | hypothetical protein SH2087 2124540 - 2124331 - | hypothetical protein SH2088 2125130 - 2124540 - | hypothetical protein SH2089 2125540 - 2125208 - | hypothetical protein SH2090 2125820 - 2125707 - | hypothetical protein TERM 2353 2125948 - 2125923 - R 100 -10.5 -5.38047 | opp_overlap 2125922 GATTTACATAAAAAA GCCATGCACCT ATTA AAGTGCATGAC CTATAATTTTACGCT SH2091 2126601 - 2125957 - | hypothetical protein SH2092 2126957 - 2126607 - | hypothetical protein SH2093 2128568 - 2127201 - | putative DNA primase-phage associated SH2094 2129449 - 2128580 - | hypothetical protein SH2095 2129843 - 2129538 - | hypothetical protein TERM 2354 2129783 - 2129770 - G 71 -5.3 -4.6468 | opp_overlap 2129770 TCAAACCATACAAAA GATGT TACA ACATC ATTAATTTTCTCTTG SH2096 2130061 - 2129858 - | hypothetical protein SH2097 2130328 - 2130074 - | hypothetical protein SH2098 2130533 - 2130330 - | hypothetical protein SH2099 2130737 - 2130537 - | hypothetical protein SH2100 2130968 - 2130750 - | hypothetical protein SH2101 2131156 - 2132073 + | hypothetical protein TERM 2355 2132505 - 2132520 + G 71 -7.6 -3.5627 | opp_overlap 2132500 CATTACTTAACCATG CCATGA AATA TCATGG TTTACAAAATAATGT int 2132063 - 2133151 + | integrase SH2103 2133165 - 2133881 + | hypothetical protein TERM 2356 2133872 - 2133892 + T 100 -10.5 -5.84432 | CTTCATAAATTCTAT GACATCCTA AAA TAGGGTGTC TTTTTTTGTATTGTG TERM 2357 2133970 - 2133946 - T 100 -12.2 -5.74684 | opp_overlap 2133946 CAACAAAAATAAAAA GCCCTCAACC AGATG GGTTGAGAGC TGTATAGTGGAGACG TERM 2358 2133946 - 2133970 + T 80 -10 -2.94099 | opp_overlap 2133946 CAACAAAAATAAAAA GCCCTCAACC AGATG GGTTGAGAGC TGTATAGTGGAGACG TERM 2359 2134208 - 2134226 + T 75 -7.4 -4.18294 | overlap 2134206 CGATGCAGAGTGCTA TTACGCAG CTA CTGCGAAA TTATTGTTTGATTTG smpB 2135013 - 2134543 - | SsrA-binding protein SH2105 2137416 - 2135038 - | ribonuclease R SH2106 2138199 - 2137459 - | hypothetical protein TERM 2360 2137733 - 2137745 + g 76 -6.3 -4.57482 | AACGTTTCAGTAGGA TGGAA GTC TTCCA TTTCTTTATCAATCG TERM 2361 2137825 - 2137835 + g 74 -6.8 -4.27316 | AAAGCCTTCGTATAT CGCA CCT TGCG TTTTACCTTCAGCGG TERM 2362 2138422 - 2138400 - R 95 -6.2 -5.73978 | opp_overlap 2138400 ATTATAAATAAAAAA GCCCGACATT AAC ATCGTCGGAC CTTATAAACCAAAGT secG 2138657 - 2138424 - | preprotein translocase subunit SecG TERM 2363 2138507 - 2138519 + g 82 -5.5 -5.27335 | opp_overlap 2138507 TATGCAAGAATAAAT CGACG CCA CGTTG TTTTTGTTTACCAAA SH2108 2139195 - 2138725 - | hypothetical protein TERM 2364 2139407 - 2139380 - R 100 -9.2 -5.37865 | TTAATAATTAAAAAA CCTGCCACAG TCTCAACT CTGTGACAGG TAATACATAAGCGTG eno 2140765 - 2139461 - | enolase TERM 2365 2140059 - 2140075 + g 72 -5.1 -4.69027 | overlap 2140060 AAGAATACATCTTCG CCAGGTT TGT AACCTGC TTTTTCGATAGCTTT TERM 2366 2140060 - 2140074 + g 75 -8.6 -3.40331 | overlap 2140059 AGAATACATCTTCGC CAGGTT TGT AACCTG CTTTTTCGATAGCTT gpmI 2142437 - 2140920 - | phosphoglyceromutase TERM 2367 2141827 - 2141837 + g 79 -5.4 -5.07486 | TCAAAGTTACGGATA GCAT TAT ATGC TTTTTGTTCACGGTC tpiA 2143201 - 2142440 - | triosephosphate isomerase pgk 2144518 - 2143328 - | phosphoglycerate kinase TERM 2368 2144100 - 2144086 - G 77 -8.6 -3.55824 | overlap 2144084 CATCATTTACAAATA CATCAC CTA GTGATG CCCAATATTTACCTA TERM 2369 2144589 - 2144559 - R 95 -8.4 -5.1244 | gap 1, opp_overlap 2144562 2144585 TTACTAATATAAAAA TAAGCGGAGAAGC GTTAGT GCTCC-CCGCTTA CTCATAAGCTAACTT gap 2145689 - 2144682 - | glyceraldehyde-3-phosphate dehydrogenase SH2114 2146754 - 2145741 - | transcriptional regulator SH2115 2147092 - 2147301 + | hypothetical protein TERM 2370 2147313 - 2147347 + T 76 -8.1 -3.77196 | gap 1, opp_overlap 2147313 TTAAAAAAGTAAAAA GTGAGACT-TGAAACA TGAC TGTTTCAAAATCTCAC TTTGATAACTACTAA TERM 2371 2147347 - 2147313 - T 100 -10.3 -5.25735 | gap 1, opp_overlap 2147313 TTAAAAAAGTAAAAA GTGAGACT-TGAAACA TGAC TGTTTCAAAATCTCAC TTTGATAACTACTAA SH2116 2148099 - 2147368 - | hypothetical protein SH2117 2148307 - 2148486 + | hypothetical protein TERM 2372 2148533 - 2148507 - f 88 -9.4 -4.2109 | opp_overlap 2148509, overlap 2148509 TAATAGATATACAAA GAGCCCACACGA TTC TCGCATGGGCTT CTACTAAAGGGAGTC TERM 2373 2148531 - 2148509 - f 95 -12 -3.68786 | opp_overlap 2148509, overlap 2148507 ATAGATATACAAAGA GCCCACACGA TTC TCGCATGGGC TTCTACTAAAGGGAG TERM 2374 2148509 - 2148531 + F 70 -7.6 -3.40403 | opp_overlap 2148509 2148507 ATAGATATACAAAGA GCCCACACGA TTC TCGCATGGGC TTCTACTAAAGGGAG SH2118 2148609 - 2148773 + | hypothetical protein SH2119 2148792 - 2149691 + | hypothetical protein SH2120 2149684 - 2149899 + | hypothetical protein TERM 2375 2149916 - 2149943 + T 100 -12.8 -4.15632 | opp_overlap 2149916 2149917, overlap 2149917 ATAGTCATAAAAAAA CGGGGAGTGTTT GTTT AAACACTCCCCA TTTGTATGTCATGGT TERM 2376 2149943 - 2149916 - T 100 -15 -5.65177 | opp_overlap 2149916 2149917, overlap 2149917 ATAGTCATAAAAAAA CGGGGAGTGTTT GTTT AAACACTCCCCA TTTGTATGTCATGGT TERM 2377 2149917 - 2149942 + T 100 -16.3 -3.08656 | opp_overlap 2149916 2149917, overlap 2149916 TAGTCATAAAAAAAC GGGGAGTGTTT GTTT AAACACTCCCC ATTTGTATGTCATGG TERM 2378 2149942 - 2149917 - T 100 -16.3 -3.9748 | opp_overlap 2149917 2149916, overlap 2149916 TAGTCATAAAAAAAC GGGGAGTGTTT GTTT AAACACTCCCC ATTTGTATGTCATGG clpP 2150555 - 2149968 - | hypothetical protein TERM 2379 2150855 - 2150876 + r 100 -8.7 -5.7827 | opp_overlap 2150859 ACATTTTAATTTCAA GAATGCCGT TGTG GCGGCGTTC TTTTTTATTTATCTT TERM 2380 2150986 - 2150962 - R 79 -5 -5.42259 | opp_overlap 2150965, overlap 2150965 CTAGTTCTAAAAAAA GAACTCGCCA ATCCA TGACGAGTTT ATACTTATAATTCTA TERM 2381 2150983 - 2150965 - R 79 -6.7 -4.79949 | opp_overlap 2150965, overlap 2150962 GTTCTAAAAAAAGAA CTCGCCA ATCCA TGACGAG TTTATACTTATAATT SH2122 2151935 - 2150991 - | hypothetical protein SH2123 2153053 - 2152067 - | hypothetical protein SH2124 2153964 - 2153050 - | hypothetical protein TERM 2382 2154098 - 2154153 + r 100 -17.2 -4.1774 | gap 1, opp_overlap 2154103, overlap 2154100 2154103 ATATTGATTTAAATA AAAAAGGCTAGAGCATGCAATCACTAT ATG AT-GTGATTGCATGCTCTAGCCTAATC TTATTTATGCTTCTT TERM 2383 2154100 - 2154151 + r 100 -19.8 -3.66489 | gap 1, opp_overlap 2154103, overlap 2154098 2154103 ATTGATTTAAATAAA AAAGGCTAGAGCATGCAATCACTAT ATG AT-GTGATTGCATGCTCTAGCCTAA TCTTATTTATGCTTC TERM 2384 2154103 - 2154148 + r 100 -25.9 -2.92496 | gap 1, opp_overlap 2154103, overlap 2154100 2154098 GATTTAAATAAAAAA GGCTAGAGCATGCAATCACTAT ATG AT-GTGATTGCATGCTCTAGCC TAATCTTATTTATGC TERM 2385 2154148 - 2154103 - R 100 -25.9 -5.65927 | gap 1, opp_overlap 2154103 2154100 2154098 GATTTAAATAAAAAA GGCTAGAGCATGCAATCACTAT ATG AT-GTGATTGCATGCTCTAGCC TAATCTTATTTATGC trxB 2155099 - 2154158 - | thioredoxine reductase TERM 2386 2154648 - 2154662 + g 93 -7.2 -5.61881 | GCAGAATCCCCGCCA CCTATT ACA AATAGG TTTTTATTTTTGAAG SH2126 2156602 - 2155163 - | hypothetical protein TERM 2387 2156058 - 2156046 - G 74 -6.3 -4.35044 | opp_overlap 2156045 TCACTTAAATACAAA TAGCA CAT TGCTA ATAAGTTGCGAATGA TERM 2388 2156308 - 2156286 - G 87 -11.4 -3.32424 | opp_overlap 2156285 2156291, overlap 2156284 2156280 2156291 ATCACATAATTAATA CCAAACAAGA AGG CCTTGTTTGG CTCATTAAGGTCAAT TERM 2389 2156530 - 2156566 + g 91 -11.9 -3.73953 | CTTGCATTTTATATT TTTGATCAGCCATTTTA CGA TAAAATGGTTCATCAAA TTTCATCGAGATAAT SH2127 2157098 - 2156619 - | hypothetical protein lgt 2157943 - 2157095 - | prolipoprotein diacylglyceryl transferase hprK 2158882 - 2157947 - | HPr kinase/phosphorylase TERM 2390 2158801 - 2158761 - G 71 -5.5 -4.61231 | opp_overlap 2158763 2158765, overlap 2158763 GCATAGTGTGAAAAA TATCCAGCCATTTCTAGAC CTG GTCTAGAAATATCCGTATT TTTAATAGGTTTATG TERM 2391 2158799 - 2158763 - G 79 -8.1 -3.91908 | opp_overlap 2158763 2158765, overlap 2158761 ATAGTGTGAAAAATA TCCAGCCATTTCTAGAC CTG GTCTAGAAATATCCGTA TTTTTAATAGGTTTA TERM 2392 2159148 - 2159117 - R 91 -6.7 -5.52986 | gap 1, opp_overlap 2159117 ATGTTATTAAAAAAA CTGAGAA-AAGCTC GATGT GAGCGTATTCTCAG TTAAGTCATTTAATA uvrA 2162053 - 2159219 - | exinuclease ABC subunit A uvrB 2164046 - 2162061 - | excinuclease ABC subunit B TERM 2393 2164327 - 2164288 - R 83 -8.8 -4.29493 | opp_overlap 2164294, overlap 2164294 TATCAAATATATAAA TAAAAATACAAACGTTTG TTCG CTTACGTTTGTATTTTCA AAATCATTTATTATT TERM 2394 2164321 - 2164294 - R 86 -5.6 -5.4433 | opp_overlap 2164294, overlap 2164288 ATATATAAATAAAAA TACAAACGTTTG TTCG CTTACGTTTGTA TTTTCAAAATCATTT SH2132 2164724 - 2164497 - | hypothetical protein SH2133 2165371 - 2164730 - | hypothetical protein TERM 2395 2164957 - 2164977 + g 71 -7.7 -3.59262 | opp_overlap 2164957 2164953 CATACAATAAATCAA TTTTGTCTG CTA CAGATAAAA TTTGACCCTCTAACG TERM 2396 2166757 - 2166718 - R 100 -15.3 -5.48825 | CATTATTCAAAAAAA GAGTTCAATAACTATGC TAAATT GCATAGCCATTGAACTC TGACATCTGAATATA SH2136 2167657 - 2166797 - | hypothetical protein prfB 2168912 - 2167914 - | peptide chain release factor 2 TERM 2397 2169114 - 2169082 - R 75 -5.7 -4.7173 | gap 1 TAGGATATGTAAAAA GTAGGAG-CGTGAA TTCTTT TTCACAACTCCCAC TTATTATTAAACATA secA 2171671 - 2169134 - | preprotein translocase subunit SecA TERM 2398 2169542 - 2169552 + g 71 -5.4 -4.4874 | CTCAAATTCAGCCAT TTGG TCA CCAA TTTTGGCTTTTTGGC TERM 2399 2171066 - 2171049 - G 75 -7.1 -4.15565 | opp_overlap 2171041 2171036 TCGATGATTGCAAAA TGTAATG GTCT CATTACA CGCTCTTCGGCATAG TERM 2400 2171962 - 2171924 - R 91 -7.7 -5.28778 | gap 2, opp_overlap 2171924 2171937, overlap 2171934 ATTAGTTACAAAAAA GAGTGGAAC-A-GAATTCA TTT TGAATTCATCGTCCCACCC TTATAAGGATAACTA TERM 2401 2171950 - 2171934 - R 70 -8.1 -3.12892 | opp_overlap 2171924 2171937, overlap 2171924 AAAAAGAGTGGAACA GAATTCA TTT TGAATTC ATCGTCCCACCCTTA SH2139 2172680 - 2172102 - | hypothetical protein SH2140 2173416 - 2172742 - | hypothetical protein SH2141 2174311 - 2173409 - | hypothetical protein SH2142 2175677 - 2174811 - | hypothetical protein SH2143 2175821 - 2176462 + | hypothetical protein TERM 2402 2176469 - 2176521 + T 73 -4.4 -5.1471 | gap 1, opp_overlap 2176470, overlap 2176470 ACTAATTAATAAAAA ACCTTGTTTGTATAACACTACCTAA TCAT TTAAGTAGTTAT-TACAAACAAGGC TTTATTTTTTATCAT TERM 2403 2176470 - 2176520 + T 71 -7.9 -3.66386 | gap 1, opp_overlap 2176470, overlap 2176469 CTAATTAATAAAAAA CCTTGTTTGTATAACACTACCTAA TCAT TTAAGTAGTTAT-TACAAACAAGG CTTTATTTTTTATCA TERM 2404 2176520 - 2176470 - T 100 -10.1 -5.5604 | gap 1, opp_overlap 2176470 2176469 CTAATTAATAAAAAA CCTTGTTTGTATAACACTACCTAA TCAT TTAAGTAGTTAT-TACAAACAAGG CTTTATTTTTTATCA llm 2177608 - 2176523 - | lipophilic protein affecting lysis rate and methicillin resistance level protein SH2145 2177973 - 2179043 + | hypothetical protein TERM 2405 2179057 - 2179112 + F 77 -2.3 -5.75478 | opp_overlap 2179057 AGAAACGTAAAAGAA GTCAACATATTGA-TTAACCAAATTAT TAAT AT-ATCTGGTTATCTAAATATGTTGAC TTTTTTTATGTAATT SH2146 2179267 - 2180028 + | hypothetical protein SH2147 2180045 - 2180539 + | hypothetical protein pepT 2180554 - 2181783 + | peptidase T TERM 2406 2181844 - 2181794 - T 100 -10.8 -4.55908 | gap 1, opp_overlap 2181797, overlap 2181797 AATAAATATAATAAA TAAGGCAAACCACAATTACC-AT GCTTAT ATAGGTAATTGCAGTTTGCCTTT TGTTAGTTATTCATT TERM 2407 2181841 - 2181797 - T 100 -12.5 -4.34559 | gap 1, opp_overlap 2181797, overlap 2181794 AAATATAATAAATAA GGCAAACCACAATTACC-AT GCTTAT ATAGGTAATTGCAGTTTGCC TTTTGTTAGTTATTC TERM 2408 2181797 - 2181841 + T 95 -8.8 -4.84262 | gap 1, opp_overlap 2181797 2181794 AAATATAATAAATAA GGCAAACCACAATTACC-ATG CTTA TATAGGTAATTGCAGTTTGCC TTTTGTTAGTTATTC SH2149 2182980 - 2181859 - | hypothetical protein TERM 2409 2183158 - 2183115 - R 95 -8.3 -5.4433 | gap 1 ATAGATAAATAAAAA CAGGAGT-GACACGGAATTC ATCTA GAATTCATTGCCCACTCCTG CATGGATGACTAGAG SH2150 2183610 - 2183290 - | hypothetical protein SH2151 2184618 - 2183743 - | hypothetical protein SH2152 2184728 - 2185243 + | hypothetical protein TERM 2410 2186211 - 2186200 - g 79 -4.4 -5.30616 | opp_overlap 2186200 2186207 2186208, overlap 2186202 GTAGTGAAAGAAAAA TTCG ATGT CGAA CTTCATCGTGAAGTT TERM 2411 2186207 - 2186230 + G 71 -7.6 -3.61715 | gap 1, opp_overlap 2186200 2186202, overlap 2186200 2186208 AAGAAAAATTCGATG T-CGAACTTCA TCG TGAAGTTCGTA TTATTGGAGAGCATC TERM 2412 2186208 - 2186228 + G 93 -12.7 -3.38812 | opp_overlap 2186200 2186202, overlap 2186200 2186207 AGAAAAATTCGATGT CGAACTTCA TCG TGAAGTTCG TATTATTGGAGAGCA murB 2185333 - 2186256 + | UDP-N-acetylmuramate dehydrogenase SH2154 2186286 - 2186603 + | hypothetical protein TERM 2413 2186645 - 2186604 - T 100 -14.8 -3.51329 | opp_overlap 2186604 2186608, overlap 2186608 TATTTTGAATTATAA TAAAGGCTTAGTAACGAT TGAAAG ATTGTTACTAAGCCTTTA TACTTTACGTTTTTA TERM 2414 2186604 - 2186645 + T 100 -17.7 -3.03811 | opp_overlap 2186604 2186608, overlap 2186608 TATTTTGAATTATAA TAAAGGCTTAGTAACGATT GAAA GATTGTTACTAAGCCTTTA TACTTTACGTTTTTA TERM 2415 2186641 - 2186608 - T 95 -11.2 -4.3953 | opp_overlap 2186604 2186608, overlap 2186604 TTGAATTATAATAAA GGCTTAGTAACGAT TGAAAG ATTGTTACTAAGCC TTTATACTTTACGTT TERM 2416 2186608 - 2186641 + T 100 -14.1 -4.15328 | opp_overlap 2186608 2186604, overlap 2186604 TTGAATTATAATAAA GGCTTAGTAACGATT GAAA GATTGTTACTAAGCC TTTATACTTTACGTT SH2155 2187602 - 2186661 - | hypothetical protein SH2156 2187699 - 2187538 - | hypothetical protein TERM 2417 2187832 - 2187811 - R 95 -7.3 -5.40072 | opp_overlap 2187813 TTTCCTCCAAAAAAA TATCGCCTT ATTC AGGGCGATA TTGAAAACTTATACT SH2157 2188891 - 2187854 - | hypothetical protein SH2158 2189789 - 2189007 - | hypothetical protein SH2159 2190745 - 2189786 - | hypothetical protein SH2160 2191703 - 2190735 - | hypothetical protein TERM 2418 2191769 - 2191739 - R 80 -9.2 -3.67792 | opp_overlap 2191739 2191739 2191752, overlap 2191755 CTATACGTATTGAAA TGATAATCGTTACC AAC GATAATGATTATCA TTGTCGTCAATATTA TERM 2419 2191739 - 2191769 + r 79 -9.2 -3.44206 | opp_overlap 2191739 2191755, overlap 2191739 2191752 CTATACGTATTGAAA TGATAATCGTTACC AAC GATAATGATTATCA TTGTCGTCAATATTA TERM 2420 2191882 - 2191932 + r 88 -10.6 -3.42581 | opp_overlap 2191882, overlap 2191885 2191930 TTTTTAATACAAAAA TAAGCCACTAAAATCGTAGTTGTT ATC AACAACACTGAATCTAGTGGCTTA TTAATGTTAGTCTTT TERM 2421 2191932 - 2191882 - R 100 -12.3 -5.0916 | opp_overlap 2191882 2191885 2191930 TTTTTAATACAAAAA TAAGCCACTAAAATC-GTAGTTGTT ATC AACAAC-ACTGAATCTAGTGGCTTA TTAATGTTAGTCTTT TERM 2422 2191885 - 2191929 + r 73 -7.9 -3.83155 | opp_overlap 2191882, overlap 2191882 TTAATACAAAAATAA GCCACTAAAATCGTAGTTGTT ATC AACAACACTGAATCTAGTGGC TTATTAATGTTAGTC nrdF 2192921 - 2191953 - | ribonucleotide-diphosphate reductase subunit beta nrdE 2195154 - 2193049 - | ribonucleotide-diphosphate reductase subunit alpha TERM 2423 2195115 - 2195131 + gr 70 -3.7 -4.99861 | overlap 2195118 TAACTTCATTATTTA GTTCAAT ATG ATTGTAC TTTTTCTCGTTCATA nrdI 2195515 - 2195117 - | ribonucleotide reductase stimulatory protein TERM 2424 2195582 - 2195560 - H 72 -5.7 -4.54681 | opp_overlap 2195560, overlap 2195557 ATTAATTAAAAAGAA GTTCTCTTA ATAGA TAAGAAAAC TTGCTAGACAATAAA TERM 2425 2195844 - 2195829 - H 70 -7.6 -3.49668 | opp_overlap 2195826 2195818 2195829 AAACTTTTTATACAA CCACAA CATG TTGTGG TTCGTTTCAAAATTT TERM 2426 2195829 - 2195844 + H 71 -7.6 -3.5332 | opp_overlap 2195829, overlap 2195826 2195818 AAACTTTTTATACAA CCACAA CATG TTGTGG TTCGTTTCAAAATTT SH2164 2196304 - 2197188 + | hypothetical protein SH2165 2197194 - 2197694 + | 7-cyano-7-deazaguanine reductase TERM 2427 2197707 - 2197735 + F 95 -7.5 -5.4148 | opp_overlap 2197697 2197708, overlap 2197708 TAAAAGATTAACTTA ACCACTAAATTGT CAA ACATTTTAGTGGA TTTTTTCATTATTTG TERM 2428 2197708 - 2197734 + F 93 -11 -3.82448 | opp_overlap 2197697 2197708, overlap 2197707 AAAAGATTAACTTAA CCACTAAATTGT CAA ACATTTTAGTGG ATTTTTTCATTATTT TERM 2429 2197734 - 2197708 - f 90 -11 -3.25653 | opp_overlap 2197708 2197707, overlap 2197697 AAAAGATTAACTTAA CCACTAAATTGT CAA ACATTTTAGTGG ATTTTTTCATTATTT SH2166 2197995 - 2199500 + | hypothetical protein TERM 2430 2199558 - 2199586 + F 100 -6.8 -6.02345 | AAGTTATCATAAGCC CCTTCATAGTAT TTTAT AAGCTATGAAGG TTTTTTTTATAATTC TERM 2431 2199819 - 2199799 - f 82 -9.7 -3.41978 | CTACAAGCTAAGCAA GCTGGGG ATCGGGG CCCCAGC AAAGAGAATTTCATT TERM 2432 2200685 - 2200715 + G 73 -7.6 -3.89412 | opp_overlap 2200685, overlap 2200680 GGCAAATGACCTAAA TGTACCTATTGGAA TTA TTCCTGGAGGTACA TTTAATGATTTCACT SH2167 2200413 - 2201339 + | hypothetical protein TERM 2433 2201360 - 2201405 + T 82 -8 -4.4773 | gap 2, opp_overlap 2201363, overlap 2201363 TATTATACTAATATA AAAGCGATTAAGGTTAATGATA GGGT TATCAT-A-CCTTAATCGCTTA TTTTAATTACTCTCC TERM 2434 2201402 - 2201363 - T 100 -9.7 -4.7219 | gap 2, opp_overlap 2201360 2201363 TATACTAATATAAAA GCGATTAAGGTTAATGATA GGGT TATCAT-A-CCTTAATCGC TTATTTTAATTACTC TERM 2435 2201363 - 2201402 + T 88 -9.7 -4.34008 | gap 2, opp_overlap 2201363, overlap 2201360 TATACTAATATAAAA GCGATTAAGGTTAATGATA GGGT TATCAT-A-CCTTAATCGC TTATTTTAATTACTC SH2168 2201945 - 2201412 - | hypothetical protein TERM 2436 2202042 - 2202003 - R 76 -6.6 -4.49644 | gap 1, opp_overlap 2202004, overlap 2202004 AGCAAAAATTTAAAA GGGAGTGCTACAAGACATT TAG AATCTATTATAGCAC-CCC TTGCATAATCAACTT TERM 2437 2202042 - 2202004 - R 78 -9 -3.28159 | opp_overlap 2202004, overlap 2202003 GCAAAAATTTAAAAG GGAGTGCTACAAGACATT TAG AATCTATTATAGCACCCC TTGCATAATCAACTT SH2169 2203175 - 2202120 - | hypothetical protein SH2170 2204797 - 2203283 - | hypothetical protein TERM 2438 2204902 - 2204952 + r 81 -8.4 -4.15006 | opp_overlap 2204906, overlap 2204913 ATTTTGCGCTTTTAA AAAAGGAACAAGACAACGAATTCA TGA TTAATTCGTTGTCTTGTTCCAACA TTTTCGCGTGACTAT TERM 2439 2204948 - 2204906 - R 100 -22.4 -5.00616 | opp_overlap 2204902 2204913 TGCGCTTTTAAAAAA GGAACAAGACAACGAATTCA TGA TTAATTCGTTGTCTTGTTCC AACATTTTCGCGTGA TERM 2440 2204913 - 2204941 + r 95 -11.9 -3.64685 | opp_overlap 2204906, overlap 2204902 TTAAAAAAGGAACAA GACAACGAATTCA TGA TTAATTCGTTGTC TTGTTCCAACATTTT opuBC 2206482 - 2204968 - | hypothetical protein SH2172 2207447 - 2206479 - | hypothetical protein TERM 2441 2207624 - 2207589 - R 88 -7.8 -4.87892 | gap 1, opp_overlap 2207589 TGGCAATAAAATAAA GGTAAGGTTCGCTAC AGAAATA GTAAC-AACCTTACC TTTTACTTTATATAC TERM 2442 2207589 - 2207624 + r 75 -5.6 -4.65153 | gap 1, opp_overlap 2207589 TGGCAATAAAATAAA GGTAAGGTTCGCTAC AGAAATA GTAAC-AACCTTACC TTTTACTTTATATAC recQ 2209410 - 2207632 - | ATP-dependent DNA helicase TERM 2443 2208202 - 2208212 + g 76 -4 -5.27476 | TTTAGCTTCTTGCGT CATA TCA TATG TTTTATTTTGTTGAA SH2174 2211305 - 2209425 - | hypothetical protein SH2175 2211425 - 2212243 + | hypothetical protein TERM 2444 2212384 - 2212425 + F 95 -11.1 -4.44448 | opp_overlap 2212385 2212387, overlap 2212387 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 2445 2212424 - 2212385 - f 100 -12.4 -4.07562 | opp_overlap 2212384 2212387, overlap 2212387 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 2446 2212422 - 2212387 - f 100 -15 -3.62348 | opp_overlap 2212384 2212387, overlap 2212385 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 2447 2212387 - 2212422 + F 100 -17.2 -4.33281 | opp_overlap 2212387 2212385, overlap 2212384 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH2176 2212395 - 2212544 + | hypothetical protein TERM 2448 2212760 - 2212744 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG tnp 2212628 - 2212885 + | IS1272 transposase TERM 2449 2213513 - 2213527 + GT 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG TERM 2450 2214223 - 2214255 + GT 93 -8 -5.1925 | opp_overlap 2214223 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC TERM 2451 2214255 - 2214223 - gT 93 -8 -5.35222 | opp_overlap 2214223 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC SH2179 2216237 - 2214300 - | hypothetical protein tnp 2213116 - 2214378 + | IS1272 transposase TERM 2452 2215508 - 2215537 + gT 74 -5.8 -4.61687 | TATTTTTCTTCTTAG CAGCACCAAAAT ACTCTG AATTTGGTGTTG TATTTTTTTGTTTCG TERM 2453 2216228 - 2216202 - GT 73 -3.8 -5.14163 | overlap 2216204 AGTCAGTAAGAAAAA CGCAAAAAGA CTTATTT TCTTTTTGTG TAAACTCATGTATGT SH2180 2217779 - 2216775 - | hypothetical protein TERM 2454 2217056 - 2217074 + g 70 -4.6 -4.73682 | CAGATTGATGTGCAG GCATATCA TCG TAATATGC TTTTATCTTCTCACC SH2181 2218483 - 2217767 - | hypothetical protein SH2182 2218714 - 2218508 - | hypothetical protein SH2183 2219380 - 2218772 - | hypothetical protein SH2184 2220526 - 2219381 - | hypothetical protein SH2185 2221103 - 2220510 - | hypothetical protein TERM 2455 2221365 - 2221389 + H 100 -8 -5.84432 | TTGAAATGTTTCTAA GTCTATCTTT TTTAT AGAGATAGAC TTTTTTTATGTTCTC SH2186 2221466 - 2222137 + | hypothetical protein SH2187 2222139 - 2222558 + | putative 6-pyruvoyl tetrahydrobiopterin synthase SH2188 2222558 - 2223274 + | hypothetical protein SH2189 2223379 - 2223990 + | hypothetical protein TERM 2456 2223982 - 2224034 + T 91 -8 -5.16841 | opp_overlap 2223988 2223992, overlap 2223988 2223992 AAACATCATATAGAA AATAAATAAACGCTTGAAGTTTCA TCATT TAAAACTTCAAGCGTTTATTTTGA TTTTTATTAATGTAC TERM 2457 2224028 - 2223988 - T 100 -18 -4.85653 | opp_overlap 2223982 2223988 2223992, overlap 2223992 CATATAGAAAATAAA TAAACGCTTGAAGTTTCA TCATT TAAAACTTCAAGCGTTTA TTTTGATTTTTATTA TERM 2458 2223988 - 2224028 + T 100 -15.8 -4.86293 | opp_overlap 2223988 2223992, overlap 2223982 2223992 CATATAGAAAATAAA TAAACGCTTGAAGTTTCA TCATT TAAAACTTCAAGCGTTTA TTTTGATTTTTATTA TERM 2459 2223992 - 2224024 + T 100 -12.2 -4.88646 | opp_overlap 2223988 2223992, overlap 2223988 2223982 TAGAAAATAAATAAA CGCTTGAAGTTTCA TCATT TAAAACTTCAAGCG TTTATTTTGATTTTT TERM 2460 2224024 - 2223992 - T 100 -14.4 -4.91046 | opp_overlap 2223992 2223988 2223982, overlap 2223988 TAGAAAATAAATAAA CGCTTGAAGTTTCA TCATT TAAAACTTCAAGCG TTTATTTTGATTTTT SH2190 2225030 - 2224041 - | hypothetical protein TERM 2461 2225204 - 2225234 + H 100 -14.2 -5.20783 | opp_overlap 2225204 CGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2462 2225234 - 2225204 - H 100 -16.4 -4.30719 | opp_overlap 2225204 CGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2463 2225377 - 2225363 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA TERM 2464 2226608 - 2226640 + G 81 -10.7 -2.63089 | opp_overlap 2226609, overlap 2226607 2226605 GTCAACAACAAAAAA AGAGATTAAACAACC TAA GGTTGCTTAATCTCA ATATTTGGACTCATC TERM 2465 2226639 - 2226609 - g 100 -16.4 -5.95946 | opp_overlap 2226608 2226607 2226605 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTTGGACTCAT tnp 2225319 - 2226635 + | transposase for ISSha1 SH2192 2227528 - 2226689 - | hypothetical protein TERM 2466 2227652 - 2227613 - R 100 -11.7 -4.56736 | gap 2, opp_overlap 2227623 2227624 ATTGAACAATTAAAA GGACTGGGAC-A-GAATTC TTTT GAATTCGTTGTCCCAGCCC TCAAAGTTGGAAAGA SH2193 2229145 - 2227769 - | hypothetical protein TERM 2467 2229875 - 2229848 - R 100 -10.6 -5.243 | opp_overlap 2229848 TAAAGTATTAAAAAA TCTCTCGCCCAA TTAT TAGGGCAAGAGA TTTTTATTTCTATTC TERM 2468 2229848 - 2229875 + r 100 -8.4 -5.4659 | opp_overlap 2229848 TAAAGTATTAAAAAA TCTCTCGCCCAA TTAT TAGGGCAAGAGA TTTTTATTTCTATTC fruA 2231858 - 2229885 - | fructose specific permease TERM 2469 2230930 - 2230942 + g 76 -6.3 -4.62622 | opp_overlap 2230929 2230930, overlap 2230917 AAGTGTTTATAGAAC GCTTT ACC AAAGC TTTGTTTCTCATTAC fruB 2232784 - 2231864 - | fructose 1-phosphate kinase TERM 2470 2231971 - 2231946 - G 73 -9.1 -2.84795 | gap 1, opp_overlap 2231946, overlap 2231945 2231964 2231965 AAATCTTCAGTAAAT GCCGTTGCTGTC CCA GA-AGCAACAGC TTGTTGAAATGCATC SH2196 2233542 - 2232787 - | hypothetical protein SH2197 2234175 - 2233696 - | hypothetical protein TERM 2471 2234273 - 2234239 - R 90 -5.8 -5.65496 | gap 1, opp_overlap 2234239 2234239 2234238 2234267, overlap 2234241 2234267 TATGAAAAATAAAAA GAGCGC-TCTTCTCT ATTATA AGAAAAGGCGCGCTC ATTGTGCGTTATTAG TERM 2472 2234269 - 2234241 - R 72 -6.1 -4.43511 | gap 1, opp_overlap 2234239 2234239 2234238 2234267, overlap 2234239 2234267 TGAAAAATAAAAAGA GCGCTCTTCTCT ATTATA AGAAAAG-GCGC GCTCATTGTGCGTTA SH2198 2234757 - 2234272 - | hypothetical protein TERM 2473 2234728 - 2234743 + g 71 -3.3 -5.17576 | TAAAATTACAGCCAC CATAC CTAAAA GTATG TTTTTTAAATTCATC TERM 2474 2234970 - 2234918 - R 78 -5.8 -4.85433 | opp_overlap 2234925, overlap 2234921 ACATAAATGTAAAAA CAAGCAATGACATCGTCAATTTTT CAATT AAAAACGAATGATGCCATTGCCTA TTTCATTTAATATTC TERM 2475 2234967 - 2234921 - R 80 -7.5 -4.50298 | opp_overlap 2234925, overlap 2234918 TAAATGTAAAAACAA GCAATGACATCGTCAATTTTT CAATT AAAAACGAATGATGCCATTGC CTATTTCATTTAATA norA 2236190 - 2235018 - | quinolone resistance protein SH2200 2236430 - 2236849 + | hypothetical protein TERM 2476 2236910 - 2236868 - f 75 -7.3 -4.15669 | gap 1, opp_overlap 2236869 2236872, overlap 2236869 2236871 AATGTATAAATTAAA TTAGCCCATAGATGACATAT TTAG ATATGT-ATCTATGGGTTAT TATATGTATTCCTCA TERM 2477 2236909 - 2236869 - f 88 -10.8 -3.08317 | gap 1, opp_overlap 2236869 2236872, overlap 2236868 2236871 ATGTATAAATTAAAT TAGCCCATAGATGACATAT TTAG ATATGT-ATCTATGGGTTA TTATATGTATTCCTC TERM 2478 2236869 - 2236909 + F 100 -13 -3.70033 | gap 1, opp_overlap 2236869 2236868 2236871, overlap 2236872 ATGTATAAATTAAAT TAGCCCATAGATGACATAT TTAG ATATGT-ATCTATGGGTTA TTATATGTATTCCTC TERM 2479 2236907 - 2236871 - f 76 -9 -3.09117 | gap 1, opp_overlap 2236869 2236872, overlap 2236869 2236868 GTATAAATTAAATTA GCCCATAGATGACATAT TTAG ATATGT-ATCTATGGGT TATTATATGTATTCC TERM 2480 2236872 - 2236906 + F 100 -12.5 -3.9679 | gap 1, opp_overlap 2236871 2236869 2236868, overlap 2236869 TATAAATTAAATTAG CCCATAGATGACATAT TTAG ATATGT-ATCTATGGG TTATTATATGTATTC SH2201 2237081 - 2237698 + | hypothetical protein SH2202 2237695 - 2237973 + | hypothetical protein TERM 2481 2238089 - 2238071 - T 80 -9 -3.6761 | overlap 2238069 GGGCCCCAACAAAGA GAATTTCT TAA AGAAATTC CACGAGCTAAGCAAG TERM 2482 2238183 - 2238163 - T 84 -9.7 -3.63655 | CCACAAGCAAAGCAA GCTGGGG TGCGGGG CCCCAGC AAAGAGATTTTCAAC TERM 2483 2238331 - 2238280 - T 73 -5.4 -4.63218 | gap 1, opp_overlap 2238282 2238285, overlap 2238285 TCCCTTCTAACAAAA GTAAATTGGAGTGAGACAACATTTA ATT TGATTGCTATCTCACTCCAA-TTAT TTTTTATATTTGTTT TERM 2484 2238282 - 2238330 + T 100 -8.3 -5.61913 | opp_overlap 2238280 2238285, overlap 2238285 CCTTCTAACAAAAGT AAATTGGAGTGAGACAACATTTA ATT TGATTGCTATCTCACTCCAATTA TTTTTTATATTTGTT TERM 2485 2238327 - 2238285 - T 100 -12.2 -4.3295 | opp_overlap 2238282 2238285, overlap 2238280 TCTAACAAAAGTAAA TTGGAGTGAGACAACATTTA ATT TGATTGCTATCTCACTCCAA TTATTTTTTATATTT TERM 2486 2238285 - 2238327 + T 100 -10 -4.8277 | opp_overlap 2238285 2238280, overlap 2238282 TCTAACAAAAGTAAA TTGGAGTGAGACAACATTTA ATT TGATTGCTATCTCACTCCAA TTATTTTTTATATTT SH2203 2239708 - 2238335 - | hypothetical protein TERM 2487 2238589 - 2238573 - G 89 -10.9 -3.54146 | overlap 2238569 2238577 2238579 AACATTCTAAAGTAA GGAACAG CAT CTGTTCC TGTAGATGCAGACCA SH2204 2241372 - 2239807 - | hypothetical protein TERM 2488 2241522 - 2241490 - R 82 -4.4 -5.71983 | gap 2, opp_overlap 2241490 2241510 TTAAGCATAAAAAAA CTTTGTGATAA-C-GT CTT ACTGACTATCACAAAG TCTATGTCATTCTTA SH2205 2241844 - 2241548 - | hypothetical protein SH2206 2242847 - 2241918 - | hypothetical protein SH2207 2243071 - 2243508 + | hypothetical protein TERM 2489 2243579 - 2243621 + T 100 -17.3 -4.07885 | opp_overlap 2243579 2243585, overlap 2243586 TATATTTATCAATAA CGAAAAGCCTGAGTTATCT ATAAC AGATACCTCAGGTTTTTCG TTTTAAGACAACGTA TERM 2490 2243621 - 2243579 - T 100 -15.8 -3.74361 | opp_overlap 2243579 2243586, overlap 2243585 TATATTTATCAATAA CGAAAAGCCTGAGTTATCTA TAA CAGATACCTCAGGTTTTTCG TTTTAAGACAACGTA TERM 2491 2243615 - 2243585 - T 80 -7.6 -4.5774 | opp_overlap 2243579 2243586, overlap 2243579 TATCAATAACGAAAA GCCTGAGTTATCTA TAA CAGATACCTCAGGT TTTTCGTTTTAAGAC TERM 2492 2243586 - 2243614 + T 100 -10.4 -5.0925 | opp_overlap 2243585 2243579, overlap 2243579 ATCAATAACGAAAAG CCTGAGTTATCT ATAAC AGATACCTCAGG TTTTTCGTTTTAAGA SH2208 2245318 - 2243657 - | hypothetical protein SH2209 2246946 - 2245315 - | hypothetical protein uppP 2247250 - 2248125 + | undecaprenyl pyrophosphate phosphatase TERM 2493 2248191 - 2248163 - f 71 -7.5 -3.57651 | opp_overlap 2248165 2248188, overlap 2248165 CTTTACACCACATAA CATCGTCAAAGAT TTA ATCTTTGGCGATT TTTTTAGTCAATGAG TERM 2494 2248165 - 2248189 + F 100 -12.3 -5.53991 | opp_overlap 2248165 2248163, overlap 2248188 TTACACCACATAACA TCGTCAAAGAT TTA ATCTTTGGCGA TTTTTTTAGTCAATG TERM 2495 2248189 - 2248165 - f 85 -10.1 -3.3636 | opp_overlap 2248165 2248188, overlap 2248163 TTACACCACATAACA TCGTCAAAGAT TTA ATCTTTGGCGA TTTTTTTAGTCAATG SH2211 2248339 - 2249013 + | hypothetical protein TERM 2496 2249046 - 2249095 + G 100 -18.3 -5.11112 | gap 1 AATCATTGATGGAGA TGCTTGTC-CAGTAGTTGATTCAG TAA TTGAATTAACTACTGGGACAGGCA TTTTTGTTACCATTT SH2212 2249020 - 2249466 + | hypothetical protein SH2213 2249478 - 2250044 + | hypothetical protein SH2214 2250680 - 2250135 - | hypothetical protein TERM 2497 2250748 - 2250720 - R 80 -5.3 -5.20216 | opp_overlap 2250720 TACATGAGTAAAAAA GTGCGATATGG ATATAGA CCATAGCACAC TTTATCCGTCTTTAA SH2215 2251078 - 2250782 - | hypothetical protein SH2216 2251747 - 2251259 - | hypothetical protein SH2217 2252262 - 2251813 - | hypothetical protein TERM 2498 2252215 - 2252237 + g 77 -9.2 -3.25918 | overlap 2252213 ATATTCTTGTATCTT TGCGATGGAT TCA ATCCATAGCA TATCTTTAACAGTTA SH2218 2252388 - 2253077 + | hypothetical protein SH2219 2253716 - 2253228 - | hypothetical protein TERM 2499 2253664 - 2253647 - G 70 -7.1 -3.72231 | GTACAGATGGAATAA TAGGTTT AATT AAACCTA CAAATGCTAAAACAA SH2220 2254936 - 2253716 - | hypothetical protein TERM 2500 2254705 - 2254674 - G 75 -8.8 -3.38317 | opp_overlap 2254674 2254677, overlap 2254672 ATCGAGAAACTAATA GCCCCCATCATTAG TGCA CTAATGATGAGTAC TTTTCTATTAATGCT TERM 2501 2254674 - 2254705 + g 70 -4.4 -4.71186 | opp_overlap 2254674 2254672, overlap 2254677 ATCGAGAAACTAATA GCCCCCATCATTAG TGCA CTAATGATGAGTAC TTTTCTATTAATGCT TERM 2502 2254677 - 2254702 + g 77 -9.1 -3.26743 | opp_overlap 2254674 2254672, overlap 2254674 GAGAAACTAATAGCC CCCATCATTAG TGCA CTAATGATGAG TACTTTTCTATTAAT SH2221 2255834 - 2254980 - | hypothetical protein SH2222 2256588 - 2255977 - | hypothetical protein TERM 2503 2257566 - 2257585 + G 74 -6.4 -4.41348 | GCAATTTCAGGTGGT TACGAAGC GATT GCTCCGTA TTTATTTAAAGAGCA SH2223 2256810 - 2257913 + | hypothetical protein TERM 2504 2257965 - 2257935 - T 70 -4.8 -4.67234 | gap 1, overlap 2257937 ATTGAATTCTAAAAA GAGCCTGAG-CAT AATTCA ATGACTCAGGCTA TAAATATATATTGGC TERM 2505 2257963 - 2257937 - T 72 -7.4 -3.94933 | gap 1, overlap 2257935 TGAATTCTAAAAAGA GCCTGAG-CAT AATTCA ATGACTCAGGC TATAAATATATATTG TERM 2506 2258005 - 2258017 + T 79 -3.4 -5.68023 | CCGATTTAAAAATGC GCTT TTAAC AAGC TTTTTTTAATTCTAA SH2224 2258648 - 2258160 - | hypothetical protein TERM 2507 2258350 - 2258333 - G 80 -6.3 -4.67011 | opp_overlap 2258335 2258340 AACTCGATGCAAAAA TAGTACC TTTA GGCACTA AATTCTGCAATACGT TERM 2508 2258535 - 2258553 + g 71 -5.2 -4.63048 | opp_overlap 2258535, overlap 2258539 GTATATACTACTGAA TGGTGCAC GTT GTGCCTCA TTTGTTGTTTCTCGA SH2225 2259364 - 2258648 - | hypothetical protein TERM 2509 2259475 - 2259499 + r 73 -8 -3.51329 | opp_overlap 2259475, overlap 2259479 TAAGCATAAAAAAAA TACTGACAGA ATGTC TTTGTCAGTA TTCTCGTTCAACATA TERM 2510 2259499 - 2259475 - R 100 -6.5 -6.02345 | opp_overlap 2259475 2259479 TAAGCATAAAAAAAA TACTGACAGAA TGT CTTTGTCAGTA TTCTCGTTCAACATA SH2226 2259879 - 2259520 - | hypothetical protein SH2227 2262175 - 2260028 - | AraC-type DNA-binding domain-containing protein TERM 2511 2262117 - 2262129 + g 70 -4.1 -4.74767 | AGAATAATACCGTCT TGGCA ACG TGTCA TTTTGTATTCATTCT SH2228 2263156 - 2262497 - | hypothetical protein TERM 2512 2263247 - 2263234 - H 71 -3.9 -5.04249 | opp_overlap 2263234 TTTTCAAAAAATAAA TCATT AACA AATGA TATGTTTTCTACAAT SH2229 2263655 - 2264473 + | hypothetical protein TERM 2513 2264675 - 2264633 - T 100 -12.3 -4.23156 | gap 2, overlap 2264630 ATATCTAACAAAGAA GGGAGTGGGAC-A-GAATTCT TTT AAAATTCGTCGTCCCACCCCC GCAAGGATGACTAGA TERM 2514 2264731 - 2264683 - T 84 -10.7 -2.71364 | overlap 2264692 2264701 CCACCCCCGCAAGGA TGACTAGAACTGAGAAAA-GCTT GATTT AAGCGCCTTCTCAGTTC-AGTCA GCTACTGCGAATTTG SH2230 2265803 - 2264799 - | hypothetical protein TERM 2515 2265121 - 2265134 + g 71 -6.7 -4.12188 | CCTAGACCCATTGCA GTTGC ACAG GCAAC TTTTACCCATAATGC TERM 2516 2265439 - 2265467 + g 83 -10.3 -3.1552 | opp_overlap 2265432, overlap 2265438 ACACCAAATCCTTGT GCTGCAATCGCTG CAC CAGCGATTGAACC TATTAATGCGTGAGA SH2231 2266435 - 2265818 - | hypothetical protein vraG 2268600 - 2266711 - | putative ABC-type transport system, permease component vraF 2269351 - 2268590 - | putative ABC-type transport system, ATPase component TERM 2517 2268909 - 2268934 + g 73 -6.9 -3.96224 | overlap 2268911 GATGTTCTTTGTCGC TGTCCACCAGA AATG TCTGATGGATA TTTATCACTAATTTC SH2234 2270523 - 2269489 - | hypothetical protein SH2235 2271190 - 2270516 - | hypothetical protein SH2236 2272128 - 2271205 - | hypothetical protein SH2237 2272239 - 2272745 + | hypothetical protein TERM 2518 2272880 - 2272919 + T 80 -6.5 -4.91084 | opp_overlap 2272880, overlap 2272875 TTGGAAATTAAAAAA GGCTTACTTCCTTAATG ATTTAA CATATAGGAAATAAGCC TTTTATTCTTAGCTA TERM 2519 2272919 - 2272880 - T 100 -8.7 -5.37593 | opp_overlap 2272880 2272875 TTGGAAATTAAAAAA GGCTTACTTCCTTAATG ATTTAA CATATAGGAAATAAGCC TTTTATTCTTAGCTA SH2238 2274028 - 2272982 - | hypothetical protein TERM 2520 2274111 - 2274086 - g 100 -9.1 -5.10767 | opp_overlap 2274086, overlap 2274060 CATTTAATAGAAAAA GCAACCCGTAT AATC ATACGAATTGC TTTTAAGATTAAAAC SH2239 2274062 - 2274160 + | hypothetical protein SH2240 2275230 - 2274163 - | hypothetical protein TERM 2521 2275540 - 2275572 + r 75 -9.3 -2.72799 | opp_overlap 2275540, overlap 2275537 TATAAAACAAAAAAA CCAGTAAATGTATCT ATT AAACACATTTACTGG TAATATATCTAAACG TERM 2522 2275572 - 2275540 - R 100 -13.7 -6.14618 | opp_overlap 2275540 2275537 TATAAAACAAAAAAA CCAGTAAATGTATCT ATT AAACACATTTACTGG TAATATATCTAAACG SH2241 2276134 - 2275634 - | hypothetical protein TERM 2523 2276203 - 2276227 + r 75 -6 -4.66535 | CATTTGTCATTTTCA TTTTATAAAT TACTT ATTTATAAAA TTTATTTTGCGCATT SH2242 2276659 - 2276279 - | hypothetical protein SH2243 2277237 - 2276656 - | hypothetical protein SH2244 2278233 - 2277271 - | hypothetical protein TERM 2524 2278194 - 2278204 + g 70 -4 -4.83677 | AGCCGTCTAACATAT CTTT TAA AAAG TTTTCCTTTTGTTTT fhuG 2279525 - 2278509 - | ABC-type cobalamin/Fe3+-siderophores transport systems, permease components TERM 2525 2279491 - 2279480 - G 71 -3 -5.17054 | ATAATATTGAAAAAA TTAC TAAA GTAA CGATTTGTTTTCGTC fhuB 2280526 - 2279522 - | ABC-type cobalamin/Fe3+-siderophores transport systems, permease components fhuA 2281358 - 2280561 - | ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components SH2248 2282399 - 2281566 - | hypothetical protein TERM 2526 2282775 - 2282738 - R 100 -14.4 -4.83615 | opp_overlap 2282738 CATTTCCCATAAAAA CCAAGTATATAGAGTG TCTCCT CACCCTACATACTTGG TTTTTATCATGTTAA TERM 2527 2282738 - 2282775 + r 100 -10 -4.98436 | opp_overlap 2282738 CATTTCCCATAAAAA CCAAGTATATAGAGTG TCTCCT CACCCTACATACTTGG TTTTTATCATGTTAA TERM 2528 2282866 - 2282810 - R 100 -11.9 -3.97331 | opp_overlap 2282810 2282817 2282818 2282820, overlap 2282820 AATCTACTGAAATAA TTCAAAAAAATCGTGGAACGAAATTCA AAT TGAATGATGTTCCACGATCCTTTTAAA TTGTCAAACATGCTA TERM 2529 2282817 - 2282859 + r 70 -5.6 -4.3208 | opp_overlap 2282810 2282820, overlap 2282810 2282818 2282820 TGAAATAATTCAAAA AAATCGTGGAACGAAATTCA AAT TGAATGATGTTCCACGATCC TTTTAAATTGTCAAA TERM 2530 2282818 - 2282858 + r 78 -9.1 -3.18766 | opp_overlap 2282810 2282820, overlap 2282817 2282810 2282820 GAAATAATTCAAAAA AATCGTGGAACGAAATTCA AAT TGAATGATGTTCCACGATC CTTTTAAATTGTCAA TERM 2531 2282856 - 2282820 - R 100 -9.5 -5.57054 | opp_overlap 2282818 2282817 2282810 2282820, overlap 2282810 AATAATTCAAAAAAA TCGTGGAACGAAATTCA AAT TGAATGATGTTCCACGA TCCTTTTAAATTGTC TERM 2532 2282820 - 2282856 + r 95 -11.7 -3.14977 | opp_overlap 2282820 2282810, overlap 2282818 2282817 2282810 AATAATTCAAAAAAA TCGTGGAACGAAATTCA AAT TGAATGATGTTCCACGA TCCTTTTAAATTGTC SH2249 2284123 - 2282891 - | hypothetical protein TERM 2533 2284288 - 2284331 + r 84 -9.1 -3.89938 | opp_overlap 2284289 2284295, overlap 2284289 2284291 2284295 TTTTTAAATAGTACA ATAGAAAGCACTAGAGT TAAATTTACT GCTCTAGTGCTTTCTAC TTTCAATTTAATTAT TERM 2534 2284330 - 2284289 - R 95 -11.9 -3.56837 | opp_overlap 2284288 2284289 2284291 2284295, overlap 2284295 TTTTAAATAGTACAA TAGAAAGCACTAGAG TTAAATTTACTG CTCTAGTGCTTTCTA CTTTCAATTTAATTA TERM 2535 2284289 - 2284330 + r 100 -12.6 -2.92878 | opp_overlap 2284289 2284295, overlap 2284288 2284291 2284295 TTTTAAATAGTACAA TAGAAAGCACTAGAGT TAAATTTACT GCTCTAGTGCTTTCTA CTTTCAATTTAATTA TERM 2536 2284291 - 2284328 + r 88 -10.8 -3.00419 | opp_overlap 2284289 2284295, overlap 2284289 2284288 2284295 TTAAATAGTACAATA GAAAGCACTAGAGT TAAATTTACT GCTCTAGTGCTTTC TACTTTCAATTTAAT tagF 2286511 - 2284343 - | glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis TagF TERM 2537 2284435 - 2284422 - G 76 -3.9 -5.24796 | opp_overlap 2284422 TCTATAGAACAAAAA TCATT ATAA AATGA TTCTATCTTATCTTG SH2251 2287641 - 2286532 - | truncated poly (glycerol-phosphate) alpha-glucosyltransferase (teichoic acid biosynthesis) SH2252 2288030 - 2287638 - | truncated UDP-glucose:polyglycerol phosphate glucosyltransferase TERM 2538 2288188 - 2288159 - R 100 -10.9 -5.00616 | opp_overlap 2288158 TTTCTTTTTAAAAAA GTAGTTGGAAC AAACTTAA GTTCCAACTAC CTAATATTCATTACT SH2253 2289926 - 2288199 - | hypothetical protein pbp4 2290067 - 2291359 + | penicillin binding protein 4 TERM 2539 2291446 - 2291425 - T 76 -8.8 -3.55453 | TATTAATATAAGGAA CCTAAGTG CTATGT CACTTAGG TAAGAAATTCTAAAA TERM 2540 2291450 - 2291482 + T 71 -7.9 -3.54741 | opp_overlap 2291450 2291454 2291480, overlap 2291454 ATGTCACTTAGGTAA GAAATTCTAAAATGT AAA ACAATTAAGAATTTC TTTAAAGAACTGCTA TERM 2541 2291582 - 2291543 - T 100 -12.4 -4.50159 | gap 1, opp_overlap 2291544 2291546, overlap 2291546 CTTAAGTTAAACAAA GAAGCCAGCAAATGAATTC AAA AAGTTCATTTGCTGGCT-C TTTTAATAGGATTAA TERM 2542 2291544 - 2291582 + T 100 -14.1 -4.28361 | opp_overlap 2291543 2291546, overlap 2291546 TTAAGTTAAACAAAG AAGCCAGCAAATGAATT CAAAA AGTTCATTTGCTGGCTC TTTTAATAGGATTAA TERM 2543 2291580 - 2291546 - T 100 -15.2 -4.35189 | opp_overlap 2291544 2291546, overlap 2291543 AAGTTAAACAAAGAA GCCAGCAAATGAATTC AAA AAGTTCATTTGCTGGC TCTTTTAATAGGATT TERM 2544 2291546 - 2291580 + T 100 -16.7 -3.74158 | opp_overlap 2291546 2291543, overlap 2291544 AAGTTAAACAAAGAA GCCAGCAAATGAATT CAAAA AGTTCATTTGCTGGC TCTTTTAATAGGATT tagD 2292012 - 2291614 - | teichoic acid biosynthesis protein D tagX 2293175 - 2292111 - | teichoic acid biosynthesis protein X TERM 2545 2292989 - 2293011 + g 83 -6.4 -4.85195 | CTGCTGCACCTTGAT TATCTTGATT GTA AATCATGATA TTTTTAACTTCTTTT tagB 2294260 - 2293172 - | teichoic acid biosynthesis protein B TERM 2546 2294367 - 2294326 - R 93 -11.9 -2.8805 | opp_overlap 2294330 2294331, overlap 2294331 ATTATGCTGTATACA CAAAATCCTTGATAAACGC ATCA ACATTTATCAAGGACTTTA AATTATAAGAAATCT TERM 2547 2294331 - 2294362 + r 74 -8.9 -2.88054 | opp_overlap 2294326 2294331, overlap 2294330 GCTGTATACACAAAA TCCTTGATAAACG CATCAA CATTTATCAAGGA CTTTAAATTATAAGA TERM 2548 2294362 - 2294331 - R 100 -11.8 -4.60797 | opp_overlap 2294331 2294330, overlap 2294326 GCTGTATACACAAAA TCCTTGATAAACGC ATCA ACATTTATCAAGGA CTTTAAATTATAAGA tagG 2295203 - 2294370 - | teichoic acid translocation permease protein tagH 2295509 - 2296303 + | teichoic acids export protein ATP-binding subunit TERM 2549 2296366 - 2296322 - T 73 -4.5 -5.1485 | gap 2, opp_overlap 2296328, overlap 2296328 TAATCAAGATAAAAA TTTA-AAGGCGGATTC-AGTC CTCTC GACTTGAATCCGCCTTCTCCA TATTTAAAATAATTA TERM 2550 2296359 - 2296328 - T 100 -13.9 -4.03989 | gap 1, opp_overlap 2296328, overlap 2296322 AGATAAAAATTTAAA GGCGGATTC-AGTC CTCTC GACTTGAATCCGCC TTCTCCATATTTAAA TERM 2551 2296328 - 2296359 + T 100 -13.9 -3.452 | gap 1, opp_overlap 2296328 2296322 AGATAAAAATTTAAA GGCGGATTC-AGTC CTCTC GACTTGAATCCGCC TTCTCCATATTTAAA tagA 2297162 - 2296398 - | teichoic acid biosynthesis protein SH2261 2297383 - 2298126 + | hypothetical protein TERM 2552 2298182 - 2298144 - T 82 -6.3 -5.10497 | gap 1, opp_overlap 2298139 2298144 AATTCATTCAAAAAA TCTCCAATAAAAAGGT ATTATTGA ACCCTTT-ATTGGAGA TTTTATTATCTGATT SH2262 2298844 - 2298197 - | hypothetical protein SH2263 2301059 - 2299017 - | hypothetical protein TERM 2553 2299817 - 2299802 - G 71 -7.6 -3.7014 | opp_overlap 2299801 CAAACGGCAATACAA CTTGTG CAAT CACAAG ACTTATAATAACCAT TERM 2554 2300509 - 2300483 - G 73 -8.1 -3.65261 | overlap 2300486 CAATAAGTAAACCAA TAATCGCACCA CCGAT TGACGCGATTA GAAATTGTTGCACCG TERM 2555 2300641 - 2300654 + g 71 -5.3 -4.48741 | overlap 2300638 GTCATAGCACCTTTA GGTAA AACC TTACC TTTTGTAATAGCTTG SH2264 2301106 - 2301213 + | hypothetical protein SH2265 2301439 - 2302680 + | succinyl-diaminopimelate desuccinylase TERM 2556 2302927 - 2302949 + G 70 -7.1 -3.72324 | TTAATATTGCTGTAT TGGGATTAG CATAT CTAATTCCA TTCTTGATACAAATC SH2266 2302779 - 2303018 + | hypothetical protein TERM 2557 2303054 - 2303097 + T 74 -8.4 -3.16035 | gap 2, overlap 2303053 AAATTAAGTAGATTT GAGGGAGTAGGACAATGAAT CTAAAC ATTC-T-GTCCAACTCCCTC CTCTTTTTATTTAAT tnp 2304343 - 2303171 - | transposase for IS256 SH2268 2304655 - 2305044 + | hypothetical protein TERM 2558 2305099 - 2305042 - T 74 -2.1 -5.59564 | opp_overlap 2305042 2305061 2305091 2305098, overlap 2305061 ATAAATTTAAAAAAA TGAGATTGAGCATTTCAAAGTAGTAGT TTTA ACTATTACTCATTCATGTTCAATCTCA TTGATTTAATCAATC mnhG 2305624 - 2305109 - | putative monovalent cation/H+ antiporter subunit G mnhF 2305901 - 2305599 - | putative monovalent cation/H+ antiporter subunit F mnhE 2306380 - 2305898 - | putative monovalent cation/H+ antiporter subunit E mnhD 2307876 - 2306377 - | putative monovalent cation/H+ antiporter subunit D mnhC 2308216 - 2307866 - | putative monovalent cation/H+ antiporter subunit C mnhB 2308638 - 2308213 - | putative monovalent cation/H+ antiporter subunit B mnhA 2311027 - 2308625 - | putative monovalent cation/H+ antiporter subunit A TERM 2559 2309574 - 2309563 - G 71 -3 -5.09762 | overlap 2309567 TGGGAATAAAGAAAA TGAT TGGT ATCA TAACCATTAAAATTA TERM 2560 2309844 - 2309825 - G 73 -8.6 -3.18869 | opp_overlap 2309828, overlap 2309817 2309828 TAAGAAACCATTTAA CAACGGCA CACC TGCCATTG ATAACGCAGCAAGTG SH2276 2311613 - 2311056 - | putative integrase SH2277 2311756 - 2311962 + | hypothetical protein TERM 2561 2311938 - 2311959 + F 70 -8.1 -2.9732 | CGATAAAGTTGAGGT GGTTAAAAC ACAA GTTTTAGCC TAATTTAACTTAAAA SH2278 2311997 - 2312218 + | hypothetical protein TERM 2562 2312345 - 2312376 + F 100 -11.8 -5.71983 | gap 1, opp_overlap 2312339 TCTAGTCAACCTTGC GAAGCTAGGAT-GAA GAA TTCTGTCCTAGCTTC TTTTTTTATAATTAA SH2279 2312520 - 2313446 + | hypothetical protein SH2280 2313596 - 2314522 + | hypothetical protein sarA 2314846 - 2315220 + | staphylococcal accessory regulator A TERM 2563 2315333 - 2315298 - T 100 -17.2 -4.57581 | opp_overlap 2315298 ATTTTAAATAACAAA GCCAGTAAATGAAATT CGTA AATTTCACTTACTGGC TTTTTTGTATATCAT TERM 2564 2315298 - 2315333 + T 100 -15 -5.43414 | opp_overlap 2315298 ATTTTAAATAACAAA GCCAGTAAATGAAATT CGTA AATTTCACTTACTGGC TTTTTTGTATATCAT TERM 2565 2315469 - 2315437 - T 84 -10.7 -2.63089 | opp_overlap 2315438, overlap 2315436 2315434 GATGAGTCCAAATAT TGAGATTAAGCAACC TTA GGTTGTTTAATCTCT TTTTTTGTTGTTGAC TERM 2566 2315438 - 2315468 + T 100 -16.4 -5.95946 | opp_overlap 2315437 2315436 2315434 ATGAGTCCAAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 2316758 - 2315442 - | transposase for ISSha1 TERM 2567 2316700 - 2316714 + g 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 2568 2316843 - 2316873 + r 100 -16.4 -4.30719 | opp_overlap 2316843 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCA TERM 2569 2316873 - 2316843 - R 100 -14.2 -5.20783 | opp_overlap 2316843 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCA SH2283 2317769 - 2316960 - | hypothetical protein TERM 2570 2317014 - 2317003 - G 71 -3 -5.02476 | ACATTTTCTAAAAAA CTTA AATA TAAG ACTAGAAACTTATCT TERM 2571 2317442 - 2317454 + g 80 -6.3 -4.68424 | opp_overlap 2317440 2317442 TTGTTAAAGATAATA CATGA TTT TCATG TTTTTCGGTAAATTC TERM 2572 2317903 - 2317872 - R 93 -11.2 -3.58329 | gap 1, opp_overlap 2317880, overlap 2317863 2317873 2317880 TAAATATTTTTTAAA TTAAAAAAGCACTTG TTA CAAGTGC-TTTTTAA CTCAGTCAATGACTG TERM 2573 2317903 - 2317873 - R 100 -12.8 -2.74515 | opp_overlap 2317880, overlap 2317863 2317872 2317880 AAATATTTTTTAAAT TAAAAAAGCACTTG TTA CAAGTGCTTTTTAA CTCAGTCAATGACTG TERM 2574 2317896 - 2317880 - R 100 -10.9 -5.37593 | opp_overlap 2317880, overlap 2317872 2317873 TTTTAAATTAAAAAA GCACTTG TTA CAAGTGC TTTTTAACTCAGTCA TERM 2575 2317880 - 2317896 + r 100 -10.9 -4.67353 | opp_overlap 2317880 2317872 2317873 TTTTAAATTAAAAAA GCACTTG TTA CAAGTGC TTTTTAACTCAGTCA SH2284 2318762 - 2318046 - | hypothetical protein TERM 2576 2318914 - 2318867 - R 87 -8.1 -4.81083 | gap 2 TTTAATGACGAAAAA TAAGAGCATGACGTT--ATTCAA AAGT TAGAATTTAACGTCATGCTCCTA GTGATGAAATTATAA SH2285 2319451 - 2318945 - | hypothetical protein TERM 2577 2319277 - 2319287 + g 70 -4 -4.93547 | TCGGTGTACCATATT TGTT TGA AACA TTTTTGATTGATTCG SH2286 2320399 - 2319605 - | hypothetical protein SH2287 2321105 - 2320401 - | hypothetical protein SH2288 2322157 - 2321204 - | ABC-type cobalamin/Fe3+-siderophores transport systems, permease components TERM 2578 2322339 - 2322370 + r 84 -10.3 -3.06796 | opp_overlap 2322339, overlap 2322348 CAAAAATAATTAAAA CTGAGAAAAGCTT GATTTA AAGCTCTTCTCAG TTCAGTCAGCTACAG TERM 2579 2322370 - 2322339 - R 100 -12.5 -4.70739 | opp_overlap 2322339 2322348 CAAAAATAATTAAAA CTGAGAAAAGCTT GATTTA AAGCTCTTCTCAG TTCAGTCAGCTACAG SH2289 2323372 - 2322461 - | hypothetical protein TERM 2580 2323501 - 2323536 + r 93 -9.2 -4.68103 | opp_overlap 2323501 TTTAAATATTAAAAA GCATTGAATATCTCTA AATT TAGAAATACTCAATGC TTTTCTTAACATTAC TERM 2581 2323536 - 2323501 - R 100 -13.6 -4.93696 | opp_overlap 2323501 TTTAAATATTAAAAA GCATTGAATATCTCTA AATT TAGAAATACTCAATGC TTTTCTTAACATTAC SH2290 2324045 - 2323548 - | hypothetical protein SH2291 2324875 - 2324111 - | MerR family transcriptional regulator SH2292 2325612 - 2324974 - | hypothetical protein TERM 2582 2325425 - 2325439 + g 76 -3.6 -5.29208 | overlap 2325426 GGCAACGATAAAATT TTTTGA GGA TCAAAG TTTGTTTTTTCTTTT TERM 2583 2325672 - 2325637 - R 93 -11.4 -3.50447 | opp_overlap 2325640 2325642, overlap 2325640 2325642 CCAATCTTTACATAA TAATACCCTCACAAAT CGAA ATTTATGAGGGTGTTA TCAAAATTTATATAA TERM 2584 2325640 - 2325669 + r 75 -8.7 -3.35774 | opp_overlap 2325637 2325640 2325642, overlap 2325642 ATCTTTACATAATAA TACCCTCACAAAT CGAA ATTTATGAGGGTG TTATCAAAATTTATA TERM 2585 2325669 - 2325640 - R 78 -8.7 -3.885 | opp_overlap 2325640 2325642, overlap 2325637 2325642 ATCTTTACATAATAA TACCCTCACAAAT CGAA ATTTATGAGGGTG TTATCAAAATTTATA TERM 2586 2325667 - 2325642 - R 93 -11.3 -3.52874 | opp_overlap 2325642 2325640, overlap 2325640 2325637 CTTTACATAATAATA CCCTCACAAAT CGAA ATTTATGAGGG TGTTATCAAAATTTA TERM 2587 2325642 - 2325667 + r 78 -9.1 -3.24161 | opp_overlap 2325640 2325637 2325642, overlap 2325640 CTTTACATAATAATA CCCTCACAAAT CGAA ATTTATGAGGG TGTTATCAAAATTTA argS 2327358 - 2325697 - | arginyl-tRNA synthetase SH2294 2327771 - 2327355 - | hypothetical protein SH2295 2328060 - 2328155 + | hypothetical protein TERM 2588 2328206 - 2328179 - f 100 -15 -4.71061 | opp_overlap 2328179 AGCCACACCTAAAAA TCCCCTCACTAC GGCA ATAGTGAGGGGA TTGGTGCATCTATGC TERM 2589 2328179 - 2328206 + F 100 -14.3 -3.21354 | opp_overlap 2328179 AGCCACACCTAAAAA TCCCCTCACTA CGGCAA TAGTGAGGGGA TTGGTGCATCTATGC TERM 2590 2328593 - 2328567 - f 72 -6 -4.56358 | opp_overlap 2328585 CACATCTATACAAAA CTATAAAAACAA ATA TTGTTTTAACAG TAAAATGTTTTGTTA TERM 2591 2329153 - 2329135 - g 89 -3.2 -5.84011 | opp_overlap 2329139, overlap 2329139 AAGAAAAAAGAAAAA TTAATCAT CAA ATGATTGA TGAAATCGACGAAGA TERM 2592 2329156 - 2329139 - g 73 -7.1 -4.0464 | opp_overlap 2329139, overlap 2329135 AAAAAGAAAAATTAA TCATCAA ATGA TTGATGA AATCGACGAAGAAAT SH2296 2328870 - 2329175 + | replication initiation protein Rep TERM 2593 2329203 - 2329222 + T 95 -5.7 -5.7946 | opp_overlap 2329203 ATATTTTTTCTAAAA CGTTAGC CAAAAA GCTAGCG TTTTTTTATTGAAAA SH2297 2329389 - 2329228 - | hypothetical protein TERM 2594 2329368 - 2329350 - G 79 -8.8 -3.71527 | opp_overlap 2329350 2329346, overlap 2329351 CTGTAAGTATTGAAA TGTCTGGC TTC GCCAGACC TACCTTTTTAAAAGG TERM 2595 2329367 - 2329351 - G 86 -12.3 -2.82595 | opp_overlap 2329350 2329346, overlap 2329350 TGTAAGTATTGAAAT GTCTGGC TTC GCCAGAC CTACCTTTTTAAAAG TERM 2596 2329531 - 2329554 + H 71 -8.2 -3.16936 | overlap 2329530 TTGCATATAAATGGG CAGTGTCTAA AAAA TTAGTCACTG GTTTTGCTCAAATTT TERM 2597 2329888 - 2329875 - H 100 -6.7 -5.80951 | ATTTAAAATAAAAAA TCGAC GCAG GTCGA TTACGAATTTGCACT SH2298 2330028 - 2330246 + | hypothetical protein SH2299 2330449 - 2330607 + | hypothetical protein SH2300 2330705 - 2330863 + | hypothetical protein SH2301 2331296 - 2331129 - | hypothetical protein SH2302 2331511 - 2331606 + | hypothetical protein TERM 2598 2331660 - 2331632 - T 100 -13.3 -4.89852 | opp_overlap 2331618 2331632 CCACACCTACAAAAA TCCCCTCACTA TTTGCGG TAGTGAGGGGA TTGGTGTATCCATGT TERM 2599 2331632 - 2331660 + T 100 -14.7 -3.33261 | opp_overlap 2331632, overlap 2331618 CCACACCTACAAAAA TCCCCTCACTATT TGC GGTAGTGAGGGGA TTGGTGTATCCATGT SH2303 2332519 - 2331749 - | hypothetical protein SH2304 2333216 - 2332521 - | ABC-type multidrug transport system, ATPase component TERM 2600 2333079 - 2333089 + g 74 -5.4 -4.7254 | opp_overlap 2333075, overlap 2333075 GCCTAATATAACTTT CATC AAA GATG TTTTTCCTGCCCCAT TERM 2601 2333292 - 2333282 - H 74 -2.6 -5.67063 | TGTATCATAAAAAAA TAAA TTA TTTA AATACATGTTGAGAT TERM 2602 2333464 - 2333452 - H 72 -4.9 -4.95211 | opp_overlap 2333452, overlap 2333444 AAAAAACCAACAAAA TGTTA TAT TAACA TTACTATTTTATCGA TERM 2603 2333585 - 2333596 + H 76 -4.4 -5.37345 | opp_overlap 2333585, overlap 2333577 2333578 TACACACTCATAGGA TGAC TTAT GTCA TTTTTTATCCTTCGA TERM 2604 2333684 - 2333706 + H 100 -9.9 -5.47218 | opp_overlap 2333687 AAAGTGTAATGTGAA TGAGACGGG AGTAG CCTGTCTCA TTTTTTTGCGTACAC TERM 2605 2333930 - 2333920 - g 87 -6.8 -5.42198 | GCTCAAAAAACAAAA CCAG AAT CTGG AACAGTTGAAACGGT msrSA 2333752 - 2335218 + | erythromycin resistance protein mphBM 2335317 - 2336216 + | macrolide 2'-phosphotransferase II TERM 2606 2336701 - 2336740 + T 74 -8.8 -3.23572 | gap 1, opp_overlap 2336701 2336703 2336708, overlap 2336708 CTTTACCTAATCAAT GAGAAAAGCAACGCACTAT ATT AAAATGCGTTGCTTTT-TC TATTATCGAATACCT TERM 2607 2336740 - 2336701 - T 84 -11 -2.62192 | gap 1, opp_overlap 2336701 2336708, overlap 2336703 2336708 CTTTACCTAATCAAT GAGAAAAGCAACGCACTAT ATT AAAATGCGTTGCTTTT-TC TATTATCGAATACCT TERM 2608 2336739 - 2336703 - T 83 -10.3 -2.8507 | opp_overlap 2336701 2336708, overlap 2336701 2336708 TTACCTAATCAATGA GAAAAGCAACGCACTAT ATT AAAATGCGTTGCTTTTT CTATTATCGAATACC TERM 2609 2336734 - 2336708 - T 93 -10.2 -4.58213 | opp_overlap 2336701 2336708, overlap 2336703 2336701 TAATCAATGAGAAAA GCAACGCACTAT ATT AAAATGCGTTGC TTTTTCTATTATCGA TERM 2610 2336708 - 2336734 + T 91 -8 -5.1523 | opp_overlap 2336708 2336703 2336701, overlap 2336701 TAATCAATGAGAAAA GCAACGCACTAT ATT AAAATGCGTTGC TTTTTCTATTATCGA SH2307 2337363 - 2336827 - | hypothetical protein TERM 2611 2337356 - 2337339 - G 70 -2.1 -5.26316 | gap 1 CTATTTCACAAAAAA TTATAAGC CAT GCT-ATAA AGTTCACGGGCCGTC SH2308 2337958 - 2337377 - | hypothetical protein TERM 2612 2338029 - 2338000 - H 95 -8.7 -5.14965 | opp_overlap 2337998 2338000 ACTCGTATTAAAAAA GTGTACAGAATAC AACC ATTTTCTGTACAC TCGTTTTTTATGTCT TERM 2613 2338000 - 2338029 + H 73 -8 -3.48985 | opp_overlap 2338000, overlap 2337998 ACTCGTATTAAAAAA GTGTACAGAATA CAACCA TTTTCTGTACAC TCGTTTTTTATGTCT binR 2338163 - 2338741 + | resolvase/integrase BinR sin 2338872 - 2339480 + | recombinase Sin TERM 2614 2339600 - 2339570 - T 75 -8.5 -3.39749 | gap 1, opp_overlap 2339577, overlap 2339577 TTAATAATTGTACAA GAAAAAAGAGTACG AATT CGCACTCT-TTTTC TAAACTAAGTATTTT TERM 2615 2339577 - 2339594 + T 75 -5.5 -4.85599 | opp_overlap 2339570 2339577 TTGTACAAGAAAAAA GAGTACG AATT CGCACTC TTTTTCTAAACTAAG TERM 2616 2339594 - 2339577 - T 95 -7.7 -5.55769 | opp_overlap 2339577, overlap 2339570 TTGTACAAGAAAAAA GAGTACG AATT CGCACTC TTTTTCTAAACTAAG SH2311 2340402 - 2339617 - | hypothetical protein TERM 2617 2340104 - 2340092 - G 74 -6.3 -4.32436 | opp_overlap 2340092 AGATTATTATTAAAA TATGG AGT CCATA TTGTATCACTCATAC TERM 2618 2340439 - 2340423 - H 72 -6.7 -4.08692 | TAACTCCTTTTAAAA TAGTAAA TAT TTTACTA AATGCAATATAACAT SH2312 2340513 - 2340623 + | hypothetical protein SH2313 2340645 - 2340851 + | hypothetical protein SH2314 2340856 - 2341041 + | hypothetical protein TERM 2619 2341050 - 2341097 + T 95 -11.8 -3.61883 | gap 2, opp_overlap 2341062, overlap 2341050 2341062 TTCTTAAACATTCAT TTA-T-CACAAAAAGAGAGTGC CAATTC GCACTCTCTTTTTGTGTAGTAA TATTATTTAAATTTT TERM 2620 2341050 - 2341094 + T 100 -14.7 -2.90711 | gap 1, opp_overlap 2341062, overlap 2341050 2341062 TTCTTAAACATTCAT TTATCACAAAAAGAGAGTGC CAATTC GCACTCTCTTTTTGTG-TAG TAATATTATTTAAAT TERM 2621 2341083 - 2341062 - T 100 -10.2 -4.9218 | opp_overlap 2341050 2341050 2341062 CATTTATCACAAAAA GAGAGTGC CAATTC GCACTCTC TTTTTGTGTAGTAAT TERM 2622 2341062 - 2341083 + T 100 -10.2 -5.01497 | opp_overlap 2341062, overlap 2341050 2341050 CATTTATCACAAAAA GAGAGTGC CAATTC GCACTCTC TTTTTGTGTAGTAAT TERM 2623 2341150 - 2341170 + T 100 -7.1 -6.11392 | opp_overlap 2341133 2341132 2341155, overlap 2341133 ACACAAAATTTATGT TAATATTTT AAT AAAATATTA TTTTTTTCTTTCTTT SH2315 2341293 - 2341168 - | hypothetical protein SH2316 2341463 - 2341317 - | hypothetical protein SH2317 2341911 - 2341621 - | hypothetical protein SH2318 2342207 - 2341908 - | hypothetical protein SH2319 2342372 - 2342488 + | hypothetical protein TERM 2624 2342594 - 2342631 + T 95 -11.7 -3.35224 | opp_overlap 2342602, overlap 2342597 2342602 TTTCAAAGCCGCTAT TTATTAAACTATTGAAA ATAG TTTCAATAGTTTAATGG TATTTGAAAACGTCT TERM 2625 2342597 - 2342628 + T 100 -13.4 -2.84325 | opp_overlap 2342602, overlap 2342594 2342602 CAAAGCCGCTATTTA TTAAACTATTGAAA ATAG TTTCAATAGTTTAA TGGTATTTGAAAACG TERM 2626 2342602 - 2342623 + T 82 -8.9 -3.86835 | opp_overlap 2342602, overlap 2342597 2342594 CCGCTATTTATTAAA CTATTGAAA ATAG TTTCAATAG TTTAATGGTATTTGA TERM 2627 2342623 - 2342602 - T 82 -8.9 -3.76224 | opp_overlap 2342597 2342594 2342602 CCGCTATTTATTAAA CTATTGAAA ATAG TTTCAATAG TTTAATGGTATTTGA SH2320 2342702 - 2342625 - | hypothetical protein TERM 2628 2342976 - 2342996 + H 85 -9.9 -3.34398 | opp_overlap 2342980, overlap 2342973 GATGATTATAGGTAG TGAATATGT ATA ACATATTCA TATTTAAAGAAAACC SH2321 2343168 - 2344337 + | hypothetical protein TERM 2629 2344558 - 2344534 - f 70 -8.6 -2.72839 | opp_overlap 2344534 AATGATTTTGAACTA TGAGTGGCTA GCATT TGGCCACTCA TTTTTTTGCTTGCAC TERM 2630 2344534 - 2344558 + F 100 -11.5 -5.63103 | opp_overlap 2344534 AATGATTTTGAACTA TGAGTGGCTAG CAT TTGGCCACTCA TTTTTTTGCTTGCAC TERM 2631 2344785 - 2344772 - f 100 -6.7 -5.79588 | opp_overlap 2344770 2344772 CCAAAACTAAAAAAA TCGAC GAAG GTCGA TGTTGGTTTTAGCAC TERM 2632 2344817 - 2344803 - f 75 -8.6 -3.40403 | TTGGTTTTAGCACAA CGTTTG GAA CAAACG TATAAGTGCGCCCTT SH2322 2344921 - 2345109 + | hypothetical protein TERM 2633 2345330 - 2345309 - f 78 -8.9 -3.29959 | opp_overlap 2345307, overlap 2345307 ATATAAGTTATAATA CATTCAAAA ATAT TTTTGAATG AGGTGCTTTATGTTT cadD 2345340 - 2345957 + | putative cadmium binding protein CadD cadX 2345975 - 2346322 + | cadmium efflux system accessory protein CadX tnp 2347160 - 2346486 - | transposase for IS431mec TERM 2634 2346529 - 2346552 + g 82 -7.4 -4.58943 | opp_overlap 2346528 2346529 TGGCATGGCGAAAAT CCGTAGATCT GAAG AGACCTGCGG TTCTTTTTATATAGA TERM 2635 2347312 - 2347351 + r 100 -16 -4.12456 | opp_overlap 2347314, overlap 2347314 CTATTGAAATTAAAT AAGCCAGTAAGTGTATTT ATAC AAATGCACTTACTGGCTG TTTTAAGCGTAGTGT TERM 2636 2347314 - 2347349 + r 100 -18.6 -3.6581 | opp_overlap 2347314, overlap 2347312 ATTGAAATTAAATAA GCCAGTAAGTGTATTT ATAC AAATGCACTTACTGGC TGTTTTAAGCGTAGT TERM 2637 2347349 - 2347314 - R 100 -16.4 -4.15998 | opp_overlap 2347314 2347312 ATTGAAATTAAATAA GCCAGTAAGTGTATTT ATAC AAATGCACTTACTGGC TGTTTTAAGCGTAGT TERM 2638 2347389 - 2347409 + r 74 -8.5 -3.1876 | opp_overlap 2347392 CTAATACTGTTTATA TTATTCAAA AGC TTTGAATAA TTCCTCACTAGAATT SH2326 2347895 - 2347389 - | hypothetical protein SH2327 2349264 - 2347966 - | hypothetical protein SH2328 2349778 - 2349302 - | hypothetical protein SH2329 2350430 - 2349894 - | hypothetical protein TERM 2639 2350640 - 2350612 - R 91 -7.6 -5.28176 | gap 1 TTCAGTTATAAAAAA CTCTTACACACAT ATAA ACG-GTGTAAGAG CATCAATTACTTTAT SH2330 2351612 - 2350677 - | hypothetical protein TERM 2640 2351191 - 2351201 + g 74 -6.8 -4.33258 | opp_overlap 2351190 TTAAGTTCATTTAAT GCAG CAA CTGC TTTATCTTTCGGAGT SH2331 2351742 - 2352182 + | hypothetical protein SH2332 2352169 - 2352312 + | hypothetical protein TERM 2641 2352355 - 2352332 - T 100 -11 -4.77567 | opp_overlap 2352335, overlap 2352335 ACTTCCATAATAAAA TAACCCGTCG AATT CGACGGGTTT TACTTTATTTTCAAG TERM 2642 2352352 - 2352335 - T 100 -12.7 -4.49377 | opp_overlap 2352335, overlap 2352332 TCCATAATAAAATAA CCCGTCG AATT CGACGGG TTTTACTTTATTTTC TERM 2643 2352335 - 2352352 + T 100 -12.7 -4.76478 | opp_overlap 2352335 2352332 TCCATAATAAAATAA CCCGTCG AATT CGACGGG TTTTACTTTATTTTC TERM 2644 2352381 - 2352406 + T 74 -9.1 -2.78384 | opp_overlap 2352381 2352397, overlap 2352384 TCAAGCATAAAAAAA TAACCGTACCT ATTA AGATACGGTTA TCTAGTAAGAGCCAC TERM 2645 2352406 - 2352381 - T 100 -11.3 -5.71983 | opp_overlap 2352381 2352384, overlap 2352397 TCAAGCATAAAAAAA TAACCGTACCT ATTA AGATACGGTTA TCTAGTAAGAGCCAC TERM 2646 2352609 - 2352552 - T 100 -11 -5.16133 | gap 2, overlap 2352554 ATTATAACATAAAAA GAGCCACTCCTCATCATAGAGTGCTTAT AAAA ATAAGCAC-C-ATAATGAAGAATGGCTA TACAGCTAGAATGGT TERM 2647 2352607 - 2352554 - T 100 -13.6 -4.19621 | gap 2, overlap 2352552 TATAACATAAAAAGA GCCACTCCTCATCATAGAGTGCTTAT AAAA ATAAGCAC-C-ATAATGAAGAATGGC TATACAGCTAGAATG TERM 2648 2352768 - 2352756 - T 73 -5.5 -4.75289 | TATTATAACATAAAA GCCAC CCA GTGAC ATGTTAGGCGGCTTA TERM 2649 2352905 - 2352876 - T 86 -4.4 -5.84432 | gap 1, overlap 2352877 TATAACATAAAAAAA GCCTACTAGA-GA GCGTA TCATCTAGTAGGT AAATACATCACAATA TERM 2650 2352904 - 2352877 - T 77 -7.9 -4.08219 | gap 1, overlap 2352876 ATAACATAAAAAAAG CCTACTAGA-GA GCGTA TCATCTAGTAGG TAAATACATCACAAT TERM 2651 2353105 - 2353078 - T 95 -5.7 -5.84432 | gap 1, overlap 2353080 TATAACATAAAAAAA TAG-GGACAAGC ACTAA ACTTGTCCCCTA GAATATAGTGTTTAT TERM 2652 2353102 - 2353080 - T 93 -9.9 -4.53737 | overlap 2353078 TAACATAAAAAAATA GGGACAAGC ACTAA ACTTGTCCC CTAGAATATAGTGTT SH2333 2354637 - 2353153 - | N-acetylmuramoyl-L-alanine amidase SH2334 2355097 - 2354612 - | holin TERM 2653 2355143 - 2355125 - R 82 -5.2 -5.48213 | opp_overlap 2355125 2355132 TATTCAAAATAAAAA GCCGACCT TAA AGGTTAGC TTTAAATTATTTATA SH2335 2357537 - 2355150 - | hypothetical protein TERM 2654 2355329 - 2355340 + g 71 -3 -5.14626 | TAAATATAGCGCTAG CATT ATTC AATG TTTTGTTTTGATACT TERM 2655 2357501 - 2357524 + g 70 -2.4 -5.26918 | overlap 2357483 2357479 CAACACTTCTAGGGT TGATATGCGT TTCT ACGTCTGTCA TTTTTTGTAACATAT TERM 2656 2357587 - 2357563 - R 95 -11.5 -4.11216 | opp_overlap 2357563 CTTTTAGTTTTAAAA GGCTACCCACT GTC AGTGAATAGCC TTACTTATATTTATC SH2336 2359531 - 2357588 - | hypothetical protein TERM 2657 2358651 - 2358667 + g 77 -9.5 -3.31144 | TGGCGTTTACTTTCT GTTTGTG CGC CACAAAC TTCTAACACTAGCCA TERM 2658 2359573 - 2359554 - R 86 -5.7 -5.45802 | CCTCCAAAATAAAAA GCCGACT AATTAA AGTCGAC TTAAAAAAAGACTTG SH2337 2359969 - 2359574 - | hypothetical protein TERM 2659 2359685 - 2359698 + g 73 -3.9 -5.20216 | TGTTTCTATTGTCCC TTGAA TTGA TTCAA TTTTTTCATCATGTG SH2338 2360408 - 2359953 - | hypothetical protein TERM 2660 2360437 - 2360416 - R 100 -10.9 -5.10933 | TTATCCAAAATAAAA CCACCAGCT ATTC AGCTAGTGG CTCGTAATCTTGACC SH2339 2360563 - 2360423 - | hypothetical protein SH2340 2360891 - 2360547 - | hypothetical protein SH2341 2362401 - 2360902 - | hypothetical protein TERM 2661 2361760 - 2361775 + g 72 -6.2 -4.2772 | CTCTTCTATGTTATT TAAAGC ATCA GCTTTA TTTGTATTAATTGAA TERM 2662 2362347 - 2362325 - G 84 -6.3 -5.04325 | opp_overlap 2362325, overlap 2362319 TCTAAATTATAAAAA CCGATACCC CTATC AGATATCGG TTTTAAATACGCTTC SH2342 2365067 - 2362401 - | hypothetical protein SH2343 2366920 - 2365079 - | hypothetical protein TERM 2663 2365741 - 2365751 + g 71 -6.8 -4.14397 | CGTTTGAAGTAGTTA CGCT TTT AGCG TTTGCTTTATCGAGT SH2344 2367947 - 2366931 - | hypothetical protein SH2345 2371098 - 2367886 - | hypothetical protein TERM 2664 2368089 - 2368106 + gr 78 -9.1 -3.21199 | opp_overlap 2368088 GTTCTGTTGACAATT CTGGGGC AAAT GCCTCAG TTAAATTACTAGCTA SH2346 2371411 - 2371103 - | hypothetical protein SH2347 2371944 - 2371441 - | hypothetical protein TERM 2665 2372001 - 2371980 - R 82 -4.3 -5.71712 | opp_overlap 2371980, overlap 2371983 TTTTATATAAAAAAA TAAGGGGAC ACAT GTCCCCAAA TATATAATTAAGCGC TERM 2666 2371998 - 2371983 - R 100 -10.4 -4.92669 | opp_overlap 2371980, overlap 2371980 TATATAAAAAAATAA GGGGAC ACAT GTCCCC AAATATATAATTAAG SH2348 2372548 - 2372009 - | hypothetical protein TERM 2667 2372303 - 2372317 + g 72 -2.8 -5.2166 | TACACGCAGTTGTTC GCCATT TTT AATTGC TTTTTTAACTTGTTC SH2349 2372973 - 2372551 - | hypothetical protein TERM 2668 2372914 - 2372883 - G 81 -5.9 -4.84274 | opp_overlap 2372883 GAACGACATCAAAAA CCCTATCACCGAC TAATTT GTTAATGATAGGG TCTGTTTTTAATGTT SH2350 2373402 - 2372989 - | hypothetical protein SH2351 2373724 - 2373395 - | hypothetical protein SH2352 2374031 - 2373717 - | hypothetical protein SH2353 2374324 - 2374031 - | hypothetical protein SH2354 2375159 - 2374338 - | hypothetical protein SH2355 2375771 - 2375181 - | hypothetical protein SH2356 2376825 - 2375869 - | hypothetical protein SH2357 2378113 - 2376770 - | hypothetical protein SH2358 2379472 - 2378207 - | putative phage terminase large subunit TERM 2669 2378306 - 2378317 + g 72 -5.8 -4.29493 | TTCTAATCTTGGTTT GACG TTAC CGTC TTTGTCTGTTTCGTA SH2359 2379836 - 2379456 - | hypothetical protein TERM 2670 2379916 - 2379890 - H 100 -9.5 -5.45652 | ATTTGTAATAAAAAA GACTACCCGAG TTTCT CTCGAATAGTC ACATATGGGAGGTAA TERM 2671 2379994 - 2379972 - g 100 -10.6 -5.06735 | CAGAAAGGAGAAAAA GTACCTACCC AAC GGATAGGCAC TCAAGCAATCAGTGG SH2360 2379938 - 2380051 + | hypothetical protein SH2361 2380567 - 2380151 - | hypothetical protein SH2362 2381016 - 2380564 - | hypothetical protein SH2363 2381197 - 2381018 - | hypothetical protein SH2364 2381357 - 2381199 - | hypothetical protein SH2365 2381562 - 2381350 - | hypothetical protein SH2366 2381778 - 2381575 - | hypothetical protein SH2367 2382047 - 2381775 - | hypothetical protein SH2368 2382509 - 2382087 - | putative dUTP pyrophosphatase SH2369 2382797 - 2382510 - | hypothetical protein SH2370 2383182 - 2382787 - | hypothetical protein SH2371 2383577 - 2383179 - | hypothetical protein SH2372 2384203 - 2383748 - | hypothetical protein SH2373 2384768 - 2384208 - | hypothetical protein TERM 2672 2384787 - 2384812 + r 80 -6.2 -4.90906 | opp_overlap 2384792 GTCACTTCCAATCTG CATAACTGAC ACTAAC GTCAGTAATG TTTTTGATATTATCG SH2374 2384967 - 2384773 - | hypothetical protein SH2375 2385371 - 2384967 - | hypothetical protein SH2376 2385606 - 2385382 - | hypothetical protein SH2377 2385767 - 2385606 - | hypothetical protein SH2378 2386531 - 2385761 - | hypothetical protein SH2379 2387320 - 2386544 - | hypothetical protein TERM 2673 2386724 - 2386708 - G 70 -8.1 -3.25942 | opp_overlap 2386708 2386697 2386695 ATGTTTTTATATCAA TGACTTT TTT AAAGTCA TCTAATCTAAAATCT SH2380 2388071 - 2387313 - | hypothetical protein SH2381 2388307 - 2388077 - | hypothetical protein SH2382 2388971 - 2388282 - | hypothetical protein TERM 2674 2388920 - 2388939 + gr 71 -7.8 -3.53164 | opp_overlap 2388920, overlap 2388932 CAACACCAGTAGCAA CGACGGAA TAAG TACCGTCG TTATCTCGCTGGTAT SH2383 2389528 - 2388983 - | hypothetical protein SH2384 2390345 - 2389560 - | hypothetical protein SH2385 2390595 - 2390338 - | hypothetical protein SH2386 2390818 - 2390570 - | hypothetical protein TERM 2675 2390869 - 2390898 + r 100 -7.1 -5.64274 | TTTTCTTAAATGTTT GACTGTTAGTCGT TGCA GCGACTTCCAGTC TTTTTTTGTGCGTAA SH2387 2391163 - 2391038 - | hypothetical protein SH2388 2391222 - 2391434 + | hypothetical protein TERM 2676 2391445 - 2391478 + T 82 -8.3 -4.63048 | gap 1, opp_overlap 2391448 ACTAATTTCTTTAAG CAACTCTGCAACTGCT CGC AACAGTT-CAGGGTTG TTTCTTGTTTCTAAG SH2389 2391567 - 2391424 - | hypothetical protein SH2390 2392145 - 2391606 - | hypothetical protein TERM 2677 2391928 - 2391939 + g 73 -4.4 -4.90519 | overlap 2391927 TGTCTTCCTTCACCG TGTG TTAG CACA TTGTTTTTTTCGTTT SH2391 2393067 - 2392138 - | hypothetical protein TERM 2678 2392822 - 2392847 + g 75 -9.9 -2.62255 | opp_overlap 2392826, overlap 2392821 2392826 TAATGCTTGCATCCC TAAATTGTGCG ATGT CGCATAATTTA ATTGCTCTGTATTAG SH2392 2393114 - 2393320 + | hypothetical protein TERM 2679 2393344 - 2393369 + T 85 -9.8 -3.41393 | opp_overlap 2393332 TTACTTCACAGCTAC GACTGTCAAG CTCCAC CTTGACGGTC TTATAGCTGTATGCT SH2393 2393726 - 2393487 - | hypothetical protein TERM 2680 2393572 - 2393541 - G 81 -8.2 -4.19215 | overlap 2393543 TACATTTAAAAAATA TATGTCTGCACTTA CATC TAAGTACAAACACA GCTTTCTGACTTCTG TERM 2681 2393570 - 2393543 - G 77 -8.6 -3.67773 | overlap 2393541 CATTTAAAAAATATA TGTCTGCACTTA CATC TAAGTACAAACA CAGCTTTCTGACTTC SH2394 2393915 - 2394589 + | hypothetical protein SH2395 2394607 - 2394744 + | hypothetical protein TERM 2682 2394755 - 2394723 - f 72 -6.5 -4.30416 | opp_overlap 2394727, overlap 2394727 2394750 ACCATTAACTGAAAA TAAAGATGTTTATAA AGA TTAATAACATCTTTA AGCGTATCACATAAA int 2394908 - 2396293 + | putative site-specific recombinase for integration and excision SH2397 2396649 - 2397512 + | hypothetical protein cspC 2397745 - 2397948 + | cold-shock protein C TERM 2683 2397994 - 2397965 - T 95 -12.3 -3.3941 | opp_overlap 2397965 ATTAGACCTAATTAA GCGCTTAGAAGAT AAAT ATCTTCTAAGTGC TTTTTTTATTACAAT TERM 2684 2397965 - 2397994 + T 100 -14.5 -5.80364 | opp_overlap 2397965 ATTAGACCTAATTAA GCGCTTAGAAGAT AAAT ATCTTCTAAGTGC TTTTTTTATTACAAT SH2399 2398420 - 2398079 - | hypothetical protein mvaK2 2399704 - 2398628 - | phosphomevalonate kinase TERM 2685 2398742 - 2398723 - G 70 -7.2 -3.75024 | overlap 2398720 TGCGATTATCAATAA TGGCGATT CCGC AATCACCA CCGCCAGCACCTGAT mvaD 2400700 - 2399717 - | mevalonate diphosphate decarboxylase TERM 2686 2400103 - 2400090 - G 83 -6.7 -4.91459 | CAATATTGATAAAAA CGTGA TGTA TCACG TGTAAGTGACATGCC mvaK1 2401628 - 2400705 - | mevalonate kinase TERM 2687 2402345 - 2402290 - R 100 -15 -3.09516 | gap 1, opp_overlap 2402309 2402310, overlap 2402293 2402311 2402336 2402337 2402339 CCGCCTACCAGGCAA GGATGACTAGGTTTGAAAAAACGCTTG ACT CAAGCGCATTTTCAAACC-AGTCAGCT ACTGACAACATGATA TERM 2688 2402342 - 2402293 - R 100 -19.7 -2.76263 | gap 1, opp_overlap 2402309 2402310, overlap 2402290 2402311 2402336 2402337 2402339 CCTACCAGGCAAGGA TGACTAGGTTTGAAAAAACGCTTG ACT CAAGCGCATTTTCAAACC-AGTCA GCTACTGACAACATG TERM 2689 2402325 - 2402311 - R 100 -10 -5.02074 | opp_overlap 2402310 2402309, overlap 2402293 2402290 CTAGGTTTGAAAAAA CGCTTG ACT CAAGCG CATTTTCAAACCAGT TERM 2690 2402399 - 2402359 - R 80 -10 -2.81045 | gap 1, opp_overlap 2402364 2402366, overlap 2402363 2402366 CTACTGACAACATGA TAAAGTAGGCTGAGACA TTTTATTT TGTCCCAGCCT-CTTTA ACTGTATCAAATTTT TERM 2691 2402395 - 2402363 - R 70 -6.4 -4.08571 | gap 1, opp_overlap 2402364 2402366, overlap 2402359 2402366 TGACAACATGATAAA GTAGGCTGAGACA TTTTATTT TGTCCCAGCCT-C TTTAACTGTATCAAA TERM 2692 2402393 - 2402366 - R 76 -9.2 -3.06651 | opp_overlap 2402364 2402366, overlap 2402363 2402359 CAACATGATAAAGTA GGCTGAGACA TTTTATTT TGTCCCAGCC TCTTTAACTGTATCA SH2403 2403280 - 2402438 - | hypothetical protein eutD 2404269 - 2403280 - | phosphotransacetylase TERM 2693 2403491 - 2403501 + g 100 -8.2 -5.78622 | TTACCTTGGATTTTA GCGC CTG GCGC TTTTTTTTCAGCTAC SH2405 2404443 - 2405192 + | putative heme peroxidase TERM 2694 2405234 - 2405274 + F 100 -9.9 -5.38054 | gap 1 TGATATTCATAACTT GTTCCCTTCTAAGCT-TG CTTGAA CATGGCTTTGAAGGGAAC TTTTTATTTATAGAA TERM 2695 2405478 - 2405442 - f 81 -8.8 -4.17762 | opp_overlap 2405445 2405448, overlap 2405445 2405448 TAGGTTTTAAAACAA CGATAACCTGAGGCAC TTACT ATGCCTCAGGCTATTA TAGTGTAGTATATGT TERM 2696 2405475 - 2405445 - f 100 -12.7 -3.10579 | opp_overlap 2405445 2405448, overlap 2405442 2405448 GTTTTAAAACAACGA TAACCTGAGGCAC TTACT ATGCCTCAGGCTA TTATAGTGTAGTATA TERM 2697 2405445 - 2405475 + F 85 -9.8 -3.49114 | opp_overlap 2405445 2405442 2405448, overlap 2405448 GTTTTAAAACAACGA TAACCTGAGGCA CTTACTA TGCCTCAGGCTA TTATAGTGTAGTATA TERM 2698 2405448 - 2405472 + F 87 -11.5 -2.58337 | opp_overlap 2405448 2405445 2405442, overlap 2405445 TTAAAACAACGATAA CCTGAGGCA CTTACTA TGCCTCAGG CTATTATAGTGTAGT TERM 2699 2405472 - 2405448 - f 95 -12.2 -3.68416 | opp_overlap 2405445 2405448, overlap 2405445 2405442 TTAAAACAACGATAA CCTGAGGCAC TTACT ATGCCTCAGG CTATTATAGTGTAGT SH2406 2405942 - 2406709 + | hypothetical protein TERM 2700 2406837 - 2406851 + G 70 -2.1 -5.25803 | TAGGAGCATGTGGTT GGATG GTTTA CATTC TTTTTTATCAAGGTT SH2407 2406722 - 2407174 + | hypothetical protein TERM 2701 2407235 - 2407201 - T 100 -13.7 -3.21924 | gap 1, opp_overlap 2407206, overlap 2407206 CTATTGTTGATAATA GAAAAGCGCGTGGCTC CCTA GAGCC-CGCGCTTTTT AAAGTTAAACTATTT TERM 2702 2407230 - 2407206 - T 100 -13.6 -4.73682 | gap 1, opp_overlap 2407206, overlap 2407201 GTTGATAATAGAAAA GCGCGTGGCTC CCTA GAGCC-CGCGC TTTTTAAAGTTAAAC TERM 2703 2407206 - 2407230 + T 100 -13.6 -4.66833 | gap 1, opp_overlap 2407206 2407201 GTTGATAATAGAAAA GCGCGTGGCTC CCTA GAGCC-CGCGC TTTTTAAAGTTAAAC SH2408 2408723 - 2407245 - | hypothetical protein TERM 2704 2408053 - 2408043 - G 70 -8.2 -3.16217 | overlap 2408041 GTCAAAGCCAACATA CGCC CAA GGCG CTACTGCCACAATCA TERM 2705 2408394 - 2408370 - G 75 -7.2 -4.22748 | overlap 2408365 TACTAATAAACTAAA TGCCGTTGCA TTAAG TGCAACAACA CATACATAACCAAAT SH2409 2409221 - 2408850 - | hypothetical protein SH2410 2409629 - 2409246 - | hypothetical protein ung 2410289 - 2409630 - | uracil-DNA glycosylase thiD 2410431 - 2411261 + | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase TERM 2706 2411294 - 2411339 + F 72 -5 -4.9138 | gap 2, opp_overlap 2411296 2411309, overlap 2411296 TTATAAACTCAAACT AACCTCCTCAAT-AA-AGTCTT TATT AAGACCATTCATTGAGGAGGTA TTTTATTTAAGTCAT TERM 2707 2411296 - 2411337 + F 75 -7.6 -4.07285 | gap 2, opp_overlap 2411296 2411309, overlap 2411294 ATAAACTCAAACTAA CCTCCTCAAT-AA-AGTCTT TATT AAGACCATTCATTGAGGAGG TATTTTATTTAAGTC TERM 2708 2411337 - 2411296 - f 86 -9.8 -3.59895 | gap 2, opp_overlap 2411296 2411294, overlap 2411309 ATAAACTCAAACTAA CCTCCTCAAT-AA-AGTCTT TATT AAGACCATTCATTGAGGAGG TATTTTATTTAAGTC SH2413 2411512 - 2411682 + | hypothetical protein TERM 2709 2411977 - 2412004 + T 100 -15 -3.98113 | opp_overlap 2411977 AAATGAATTAAAAAA CGCATTGATGCG AACG TGCATCAATGCG TTTAATTGATAATTA TERM 2710 2412004 - 2411977 - T 100 -14.3 -5.33921 | opp_overlap 2411977 AAATGAATTAAAAAA CGCATTGATGC GAACGT GCATCAATGCG TTTAATTGATAATTA proP 2413426 - 2412020 - | hypothetical protein TERM 2711 2413638 - 2413593 - R 100 -7.3 -6.01725 | opp_overlap 2413594 2413601, overlap 2413594 AATAAAAACAAAAAA GGCTATAATTAAAAATTAATA ATTT TATCAATTTCTAATTATAACT AGTTTTACCCCATTA TERM 2712 2413637 - 2413594 - R 95 -10.8 -4.15545 | opp_overlap 2413594 2413601, overlap 2413593 ATAAAAACAAAAAAG GCTATAATTAAAAATTAATA ATTT TATCAATTTCTAATTATAAC TAGTTTTACCCCATT SH2415 2413880 - 2413620 - | hypothetical protein SH2416 2414250 - 2413870 - | hypothetical protein SH2417 2415364 - 2414219 - | acetyl-CoA c-acetyltransferase SH2418 2416746 - 2415361 - | hypothetical protein TERM 2713 2416882 - 2416914 + r 81 -9.9 -3.05935 | opp_overlap 2416882, overlap 2416887 2416910 AATCTATTAAAAAAA TCCAACCGATGCCTT TTA AGGGAATCGATTGGA TTAAATAAACACTAT TERM 2714 2416914 - 2416882 - R 100 -9.9 -5.54894 | opp_overlap 2416882 2416887 2416910 AATCTATTAAAAAAA TCCAACCGATGCCTT TTA AGGGAATCGATTGGA TTAAATAAACACTAT SH2419 2417478 - 2416930 - | hypothetical protein SH2420 2418113 - 2417481 - | hypothetical protein SH2421 2418386 - 2418745 + | hypothetical protein SH2422 2418759 - 2419424 + | hypothetical protein TERM 2715 2419954 - 2419934 - g 82 -7.7 -4.48299 | TTACACGTAAAGAAA TTACAATTG AAG CAACTGTAA CAACACTATGCCCAT TERM 2716 2420056 - 2420046 - g 77 -5.4 -4.99035 | opp_overlap 2420046 TTATTTAGATAAAAA CAAC CAG GTTG TTGATGATTATAAAG SH2423 2419438 - 2420316 + | putative GTP cyclohydrolase TERM 2717 2420334 - 2420374 + T 95 -11.4 -3.91196 | opp_overlap 2420337, overlap 2420337 GTTTCATATAAATAA TAAGGCAGTTGTCACA CGTTTCAAA TGTGATAACTGCCTTG TTTAATATATATAAA TERM 2718 2420337 - 2420371 + T 95 -10.9 -4.07595 | opp_overlap 2420337, overlap 2420334 TCATATAAATAATAA GGCAGTTGTCACA CGTTTCAAA TGTGATAACTGCC TTGTTTAATATATAT TERM 2719 2420371 - 2420337 - T 95 -10.8 -4.18983 | opp_overlap 2420337 2420334 TCATATAAATAATAA GGCAGTTGTCACACGT TTC AAATGTGATAACTGCC TTGTTTAATATATAT SH2424 2422715 - 2420655 - | hypothetical protein TERM 2720 2422347 - 2422368 + g 81 -8.1 -4.25437 | overlap 2422348 ACTTTTACCCATTGA TCCAGTTAT AGCA ATAACTGGG TTTGTGTATTGATTT TERM 2721 2422348 - 2422367 + g 74 -9.4 -3.13636 | overlap 2422347 CTTTTACCCATTGAT CCAGTTAT AGCA ATAACTGG GTTTGTGTATTGATT SH2425 2424341 - 2422725 - | hypothetical protein TERM 2722 2424145 - 2424161 + g 70 -3.7 -4.92828 | TCTAATTTAATCCAC TCAGG AAGTTCC CCTGA TTTCTTTTTAAATTT TERM 2723 2424404 - 2424435 + r 93 -11.7 -2.57463 | opp_overlap 2424405 2424410, overlap 2424410 ATCATAGTATTTAAA ATAAAACCAGGCC ATGTAA GGCCTGGTTTTAA GTTCTACCCAAAATT TERM 2724 2424434 - 2424405 - R 100 -15.2 -4.22652 | opp_overlap 2424404 2424410, overlap 2424410 TCATAGTATTTAAAA TAAAACCAGGCC ATGTAA GGCCTGGTTTTA AGTTCTACCCAAAAT TERM 2725 2424429 - 2424410 - R 100 -10.7 -5.10933 | opp_overlap 2424410 2424404, overlap 2424405 GTATTTAAAATAAAA CCAGGCC ATGTAA GGCCTGG TTTTAAGTTCTACCC TERM 2726 2424410 - 2424429 + r 95 -10.7 -4.3208 | opp_overlap 2424405 2424410, overlap 2424404 GTATTTAAAATAAAA CCAGGCC ATGTAA GGCCTGG TTTTAAGTTCTACCC SH2426 2430032 - 2424465 - | hypothetical protein TERM 2727 2424571 - 2424587 + g 73 -9.5 -2.92335 | overlap 2424570 TTATTTTGAGCATCA TTACCAG TAT CTGGTAA CTCTTTATTATTTGG TERM 2728 2430164 - 2430138 - H 100 -11.2 -5.40072 | opp_overlap 2430138 2430131 GGTTTTTTAAAAAAA TATTAATTTAGT TAT ACTAAATTAATA TTTATAATTTTATGA TERM 2729 2430138 - 2430164 + H 95 -11.2 -4.2408 | opp_overlap 2430138, overlap 2430131 GGTTTTTTAAAAAAA TATTAATTTAGT TAT ACTAAATTAATA TTTATAATTTTATGA TERM 2730 2430297 - 2430338 + H 95 -11.1 -4.44448 | opp_overlap 2430298 2430300, overlap 2430300 ATAAACCCTAGAGAA ATAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTTC TTTATTTACAATACT TERM 2731 2430337 - 2430298 - H 100 -12.4 -4.07562 | opp_overlap 2430297 2430300, overlap 2430300 TAAACCCTAGAGAAA TAGCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGCTT CTTTATTTACAATAC TERM 2732 2430335 - 2430300 - H 100 -15 -3.62348 | opp_overlap 2430300 2430297, overlap 2430298 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT TERM 2733 2430300 - 2430335 + H 100 -17.2 -4.33281 | opp_overlap 2430298 2430300, overlap 2430297 AACCCTAGAGAAATA GCCAGTAAATGAGTTT TAAC AAATTCATTTACTGGC TTCTTTATTTACAAT SH2427 2430308 - 2430457 + | hypothetical protein TERM 2734 2430673 - 2430657 - g 70 -8.1 -3.32066 | AACAATTCCTGACAA TGAATTC GAC GAATTCA GACATCACCGTGGTG TERM 2735 2431427 - 2431441 + G 77 -5.8 -4.75289 | ATTTACAAATAGCGA CAAATT CCC AATTTG TTTTATCTTATAATG tnp 2430541 - 2431977 + | IS1272 transposase TERM 2736 2432169 - 2432137 - T 93 -8 -5.35222 | opp_overlap 2432137 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC TERM 2737 2432137 - 2432169 + T 93 -8 -5.1925 | opp_overlap 2432137 AAAATTTATAAAAAA GACAATTTCTAT ATTATTTCA ATAGAAATTGTC TTTTTTCACTTATCC SH2429 2432828 - 2432229 - | fibrinogen-binding protein SdrG SH2430 2433383 - 2432877 - | fibrinogen-binding protein SdrG SH2431 2434481 - 2433888 - | hypothetical protein TERM 2738 2434670 - 2434653 - R 100 -8.5 -5.23765 | opp_overlap 2434656, overlap 2434629 TAAACAATACAAAAA GAACGAT AATT ATCGTTC TAAAAAAACTAGTTT SH2432 2435291 - 2434725 - | hypothetical protein SH2433 2436183 - 2435314 - | hypothetical protein SH2434 2436790 - 2436317 - | hypothetical protein SH2435 2436854 - 2437471 + | hypothetical protein SH2436 2437464 - 2438126 + | hypothetical protein TERM 2739 2438138 - 2438167 + T 72 -5.1 -4.95854 | opp_overlap 2438133 2438138 TTAACATAAACAAAA CGCTACACA TTTCAAACTCTT TGTGTAGCG TTTTTACATTTTTTA TERM 2740 2438167 - 2438138 - T 74 -5.1 -5.10033 | opp_overlap 2438138, overlap 2438133 TTAACATAAACAAAA CGCTACACA TTTCAAACTCTT TGTGTAGCG TTTTTACATTTTTTA SH2437 2438886 - 2438185 - | hypothetical protein SH2438 2439405 - 2438986 - | hypothetical protein TERM 2741 2439608 - 2439567 - R 86 -8.9 -4.16301 | gap 1, opp_overlap 2439568, overlap 2439568 AACCGATATAAATAA TTCACCCCGAAAATTAGATT TTT AATCTAATAC-CGGGGTGAT TTTTCATTATAGCTT TERM 2742 2439568 - 2439607 + r 100 -10.2 -4.93968 | gap 1, opp_overlap 2439567 2439568 ACCGATATAAATAAT TCACCCCGAAAATTAGATT TTT AATCTAATAC-CGGGGTGA TTTTTCATTATAGCT TERM 2743 2439607 - 2439568 - R 95 -12.4 -3.08696 | gap 1, opp_overlap 2439568, overlap 2439567 ACCGATATAAATAAT TCACCCCGAAAATTAGATT TTT AATCTAATAC-CGGGGTGA TTTTTCATTATAGCT SH2439 2439704 - 2439627 - | hypothetical protein SH2440 2440539 - 2439823 - | hypothetical protein SH2441 2441061 - 2440765 - | hypothetical protein TERM 2744 2441314 - 2441294 - R 100 -10.5 -5.09762 | opp_overlap 2441296 ATTTTAATATAAAAA CACCTGTCA TAG TAACAGGTG TCTAAGCTAAGATAA SH2442 2441475 - 2441341 - | hypothetical protein SH2443 2442108 - 2441659 - | hypothetical protein SH2444 2442619 - 2443035 + | hypothetical protein TERM 2745 2443381 - 2443339 - T 86 -9.4 -3.82628 | gap 2, overlap 2443337 TATCGTAAATAAATA GGGAGTGGGAC-A-GAATTC TTTTT AAATTCGTCGTCCCACCCCC GCAAGGATGACTAGA TERM 2746 2443419 - 2443407 - T 72 -3.4 -5.1925 | overlap 2443389 CTAGAACTGAAAAAA GCTT GATTT AAGC GCATTTTCAGTTCAG SH2445 2443889 - 2443617 - | hypothetical protein SH2446 2444166 - 2443909 - | hypothetical protein TERM 2747 2444365 - 2444333 - R 84 -10.7 -2.63089 | opp_overlap 2444334, overlap 2444332 2444330 GATGAGTCCAAATAT TGAGATTAAGCAACC TTA GGTTGTTTAATCTCT TTTTTTGTTGTTGAC TERM 2748 2444334 - 2444364 + r 100 -16.4 -5.95946 | opp_overlap 2444333 2444332 2444330 ATGAGTCCAAATATT GAGATTAAGCAACC TTA GGTTGTTTAATCTC TTTTTTTGTTGTTGA tnp 2444985 - 2444338 - | transposase for ISSha1 tnp 2445652 - 2444939 - | transposase for ISSha1 TERM 2749 2445594 - 2445608 + gr 76 -3.6 -5.23644 | TTCTCAATCACTTCA TCTGAA AAA TTTAGA TTTTTATCTTTAATT TERM 2750 2445767 - 2445737 - R 100 -14.2 -5.20783 | opp_overlap 2445737 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 2751 2445737 - 2445767 + r 100 -16.4 -4.30987 | opp_overlap 2445737 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 2752 2445847 - 2445804 - R 91 -10.6 -4.25283 | opp_overlap 2445811, overlap 2445811 ACCTTCGCATTAAAA TAAAAAACTAGAAACCTCGA TTTC TCAAGATTTCCAGCTCTTTA AACTCACCTTATTTA TERM 2753 2445840 - 2445811 - R 100 -8.7 -5.83211 | opp_overlap 2445811, overlap 2445804 CATTAAAATAAAAAA CTAGAAACCTCGA TTTC TCAAGATTTCCAG CTCTTTAAACTCACC ilvE 2446932 - 2445856 - | branched-chain amino acid aminotransferase TERM 2754 2445962 - 2445980 + g 85 -9 -4.21945 | GTAATTTCTCCTGGC TCGTTATT GTT AATAACGA TTTCTCTATCTTCAT TERM 2755 2446630 - 2446666 + g 74 -6.7 -4.38171 | opp_overlap 2446637 ATCTACTTTAGGCAT CTCTAAACGTGCTAATG AAT CATTAATACGTTTGAAG TTTTGATCTGGTCTA TERM 2756 2447142 - 2447122 - R 100 -8.3 -5.61277 | opp_overlap 2447122 GATAAAAAAAGAAAA CCTCAAACA TTT CGTCTGAGG TTCTGTGTTATATGA SH2450 2448133 - 2447177 - | hypothetical protein SH2451 2448293 - 2448388 + | hypothetical protein SH2452 2448422 - 2451325 + | hypothetical protein TERM 2757 2451377 - 2451340 - T 100 -12.3 -4.40173 | gap 1, opp_overlap 2451340 ATTACAAATTTAAAA CCGTGTAGATGACA-ATT AAC AATATGTCATTTACACGG TTTCTTTATAATTTT TERM 2758 2451340 - 2451377 + T 100 -14.5 -4.66388 | gap 1, opp_overlap 2451340 ATTACAAATTTAAAA CCGTGTAGATGACA-ATT AAC AATATGTCATTTACACGG TTTCTTTATAATTTT TERM 2759 2451423 - 2451440 + T 75 -5.7 -4.72272 | opp_overlap 2451422, overlap 2451420 CTCATAGTAAGTTAT TTAAAGT GAAT ACTTTAA TTTTTAGTGGCCCGG SH2453 2452483 - 2451524 - | ornithine cyclodeaminase TERM 2760 2452737 - 2452782 + G 81 -7.5 -4.35339 | overlap 2452742 2452743 TATTTATAAACTTTT GACGCCTAGAGTGGCACGACG AAAT CGTTGTGCCACTCTAATTTGC TTTATTCATTAATCT TERM 2761 2452742 - 2452777 + G 100 -17 -4.23652 | overlap 2452737 2452743 ATAAACTTTTGACGC CTAGAGTGGCACGACG AAAT CGTTGTGCCACTCTAA TTTGCTTTATTCATT TERM 2762 2452743 - 2452776 + G 100 -20.5 -3.12564 | overlap 2452742 2452737 TAAACTTTTGACGCC TAGAGTGGCACGACG AAAT CGTTGTGCCACTCTA ATTTGCTTTATTCAT SH2454 2452696 - 2452794 + | hypothetical protein SH2455 2453363 - 2452944 - | hypothetical protein SH2456 2453881 - 2453375 - | hypothetical protein TERM 2763 2454068 - 2454041 - R 91 -7 -5.29445 | overlap 2454043 TTGTAACAATAAAAA GACTGGGACAAT GAAT ATCATCCCAGAC TAAAAATTCTATCTT TERM 2764 2454066 - 2454043 - R 81 -8.2 -4.27297 | overlap 2454041 GTAACAATAAAAAGA CTGGGACAAT GAAT ATCATCCCAG ACTAAAAATTCTATC SH2457 2455284 - 2454094 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 2765 2455410 - 2455420 + H 74 -4 -5.33921 | ATGTACAACTGTTCA TACA ACA TGTA TTTTTTACTTCATTT SH2458 2455520 - 2456686 + | hypothetical protein TERM 2766 2456715 - 2456752 + T 83 -5.1 -5.59655 | gap 1 TATTTAGATTCTGTA TGTCTATGATT-ACTC TTACATT GAGTTGATCATAGGCA TTTTTTATTAATTTA TERM 2767 2456865 - 2456847 - T 100 -10.3 -6.14618 | opp_overlap 2456844 2456847 2456849 TACAAAATAAAAAAA GACTCCC ATTAA GGGAGTC TCATTTAGAAATAAG TERM 2768 2456847 - 2456865 + T 83 -10.3 -2.91695 | opp_overlap 2456847, overlap 2456844 2456849 TACAAAATAAAAAAA GACTCCC ATTAA GGGAGTC TCATTTAGAAATAAG tuf 2458077 - 2456893 - | elongation factor Tu TERM 2769 2458049 - 2458062 + g 79 -3.9 -5.46706 | ATATTGGCATGTTCT TTTGA GCGA TCAAA TTTTTCTTTTGCCAT TERM 2770 2458155 - 2458117 - R 91 -11.3 -3.07236 | opp_overlap 2458117 2458114 2458134 AAAGTTATTTCAATA TTATCTCTCATGATAGT TTCTC ACCATCATGAGACATAA TGATTGTTAGAATTC TERM 2771 2458117 - 2458155 + r 74 -9.1 -2.94759 | opp_overlap 2458117, overlap 2458114 2458134 AAAGTTATTTCAATA TTATCTCTCATGATAGT TTCTC ACCATCATGAGACATAA TGATTGTTAGAATTC fusA 2460363 - 2458282 - | elongation factor G TERM 2772 2460216 - 2460245 + g 72 -5.8 -4.42386 | GTTCCATCCAGTCCA TTTGTGAAGCAC CTTCGT GTGTTTCACCAA TTTTGTGGATACGAC rpsG 2460955 - 2460485 - | 30S ribosomal protein S7 rpsL 2461439 - 2461026 - | 30S ribosomal protein S12 SH2463 2461789 - 2461529 - | putative ribosomal protein L7Ae-like TERM 2773 2461718 - 2461728 + g 74 -6.8 -4.41348 | opp_overlap 2461718 TTGATCTCTATTTAA CGCT TTA AGCG TTTCTTTAAGACCAA TERM 2774 2461947 - 2461898 - R 77 -4.7 -5.22768 | opp_overlap 2461907, overlap 2461901 ATAATAAAAAATAAA GAACGAGAGCGAGAC-TATC-ATCT CAAA AGATTGATAAGTCCCG-TCTCGT-C AATATTGAAATAAAT TERM 2775 2461945 - 2461901 - R 80 -7.5 -4.61916 | gap 3, opp_overlap 2461907, overlap 2461898 ATAAAAAATAAAGAA CGAGAGCGAGAC-TATC-ATCT CAAA AGATTGATAAGTCCCG-TCTCG TCAATATTGAAATAA rpoC 2465607 - 2461987 - | DNA-directed RNA polymerase subunit beta' TERM 2776 2463745 - 2463765 + g 71 -6.3 -4.09963 | overlap 2463746 ATTACCTAAGAATTT TTTATTGAA TGG TTCAATAAG TTCTTGTTCTTCAAA rpoB 2469329 - 2465778 - | DNA-directed RNA polymerase subunit beta SH2466 2470144 - 2469536 - | hypothetical protein TERM 2777 2470232 - 2470191 - R 100 -14.7 -3.27674 | opp_overlap 2470195 2470201, overlap 2470201 ATTTTACTAGAAAAT GAAGTAAAAACCCCGTTAT CGTG ATAACGGGGTTTTAATTTC TCAAAGAATTCAGGT TERM 2778 2470195 - 2470228 + r 100 -14.1 -3.86822 | opp_overlap 2470191 2470201, overlap 2470201 TACTAGAAAATGAAG TAAAAACCCCGTTAT CGTG ATAACGGGGTTTTAA TTTCTCAAAGAATTC TERM 2779 2470222 - 2470201 - R 100 -13.1 -4.97312 | opp_overlap 2470201 2470195, overlap 2470191 AAAATGAAGTAAAAA CCCCGTTAT CGTG ATAACGGGG TTTTAATTTCTCAAA TERM 2780 2470201 - 2470222 + r 100 -13.1 -4.61873 | opp_overlap 2470191 2470201, overlap 2470195 AAAATGAAGTAAAAA CCCCGTTAT CGTG ATAACGGGG TTTTAATTTCTCAAA rplL 2470685 - 2470317 - | 50S ribosomal protein L7/L12 TERM 2781 2470499 - 2470525 + g 70 -2.3 -5.32882 | TTTTTGAAGATCCAG CTGAAGTTAAC TCAAC GTCAAATTCAG TTTTTTCTGCTGCTG TERM 2782 2470558 - 2470586 + g 84 -11.7 -3.02461 | TCTCCGCCACCAGCT GCACCAGCTGCTG CTA CAGGAGCTGCTGC TGTTACACCAAATTC rplJ 2471225 - 2470725 - | 50S ribosomal protein L10 TERM 2783 2471305 - 2471279 - H 100 -10.2 -5.7946 | opp_overlap 2471251 TTCTCAATAAAAAAA GCACTTTCTACC CAC GGCAAAAAGCGC TTGAAAGATCATTTT TERM 2784 2471630 - 2471660 + H 100 -14.2 -5.20783 | opp_overlap 2471630 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2785 2471660 - 2471630 - H 100 -16.4 -4.30719 | opp_overlap 2471630 TGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT tnp 2471746 - 2472459 + | transposase for ISSha1 TERM 2786 2473064 - 2473034 - g 100 -16.4 -5.95946 | opp_overlap 2473032 2473042 2473043 TCAACAACAAAAAAA GAGATTAAACAACC TAA GGTTGCTTAATCTC AATATTAGGACTCAT tnp 2472536 - 2473060 + | transposase for ISSha1 TERM 2787 2473202 - 2473172 - T 91 -9.8 -4.18983 | opp_overlap 2473175, overlap 2473175 CCATATAAATAACAA TAACCTGTGACATT CGA AAAGTCACAGGTTC TATAATTAAATAAGT TERM 2788 2473199 - 2473175 - T 95 -11.5 -4.18443 | opp_overlap 2473175, overlap 2473172 TATAAATAACAATAA CCTGTGACATT CGA AAAGTCACAGG TTCTATAATTAAATA TERM 2789 2473175 - 2473199 + T 93 -11.5 -3.60661 | opp_overlap 2473175 2473172 TATAAATAACAATAA CCTGTGACATT CGA AAAGTCACAGG TTCTATAATTAAATA rplA 2473923 - 2473228 - | 50S ribosomal protein L1 rplK 2474570 - 2474148 - | 50S ribosomal protein L11 TERM 2790 2474296 - 2474309 + g 80 -6.7 -4.82901 | ACTTTAGTTTTGTTA GGTTC ACCA GAACC TTTTTCTACGCCAGC TERM 2791 2474651 - 2474635 - R 87 -9.5 -3.91897 | CCTCCCACTCATAAA CATTTCG TGA CGAAATG AGCGCTATAAAAACG nusG 2475306 - 2474758 - | transcription antitermination protein secE 2475524 - 2475324 - | preprotein translocase subunit SecE SH2475 2476414 - 2475824 - | hypothetical protein SH2476 2477012 - 2476485 - | hypothetical protein SH2477 2477758 - 2477009 - | hypothetical protein SH2478 2478162 - 2477767 - | hypothetical protein cysS 2479555 - 2478155 - | cysteinyl-tRNA synthetase cysE 2480180 - 2479539 - | serine acetyltransferase TERM 2792 2480306 - 2480263 - R 72 -4.7 -4.89521 | gap 1, overlap 2480266 2480267 ACATTCTAAACAAAA TA-ATTAGCGCCCCTAACAC TTAAG ATGCTAGAGGCGCTACTGCA CGGTTCCACTCTGTA TERM 2793 2480302 - 2480266 - R 93 -10.2 -4.54026 | overlap 2480263 2480267 TTCTAAACAAAATAA TTAGCGCCCCTAACAC TTAAG ATGCTAGAGGCGCTAC TGCACGGTTCCACTC TERM 2794 2480301 - 2480267 - R 100 -13.7 -3.31331 | overlap 2480266 2480263 TCTAAACAAAATAAT TAGCGCCCCTAACAC TTAAG ATGCTAGAGGCGCTA CTGCACGGTTCCACT TERM 2795 2480530 - 2480520 - R 74 -6.8 -4.36262 | opp_overlap 2480520 2480518 ATACTCATACCAAAA TGGC TTC GCCA TCTTTAACTTTATCA gltX 2482077 - 2480623 - | glutamyl-tRNA synthetase SH2482 2483589 - 2482522 - | hypothetical protein radA 2484979 - 2483615 - | DNA repair protein RadA TERM 2796 2484234 - 2484222 - G 82 -7.7 -4.51174 | TTAGTAGAACCAAAA CGGTT CTT AACCG CTCTCAAGATACGAT TERM 2797 2485181 - 2485141 - R 72 -4.9 -4.84363 | gap 1, opp_overlap 2485146, overlap 2485134 2485146 TGAAATCATTAAAAA TTAAAGCTGAGACAT-TC GAGTAT GATATGTCTCAGCTTATA TTTAACATTAATTTT TERM 2798 2485146 - 2485176 + r 89 -9.9 -3.84017 | gap 1, opp_overlap 2485146 2485141 TCATTAAAAATTAAA GCTGAGACAT-TCG AGTA TGATATGTCTCAGC TTATATTTAACATTA TERM 2799 2485176 - 2485146 - R 86 -9.2 -4.35327 | gap 1, opp_overlap 2485146, overlap 2485141 TCATTAAAAATTAAA GCTGAGACAT-TC GAGTAT GATATGTCTCAGC TTATATTTAACATTA clpC 2487677 - 2485203 - | endopeptidas Clp ATP-binding chain C TERM 2800 2486287 - 2486304 + g 70 -4.1 -4.66953 | GTGGATTGATCACCT TGAGTTG TTTT CCACTCA TTTTTGGCATCTTCA SH2485 2488700 - 2487693 - | ATP:guanido phosphotransferase SH2486 2489256 - 2488693 - | hypothetical protein ctsR 2489740 - 2489279 - | hypothetical protein nupC 2489895 - 2491109 + | pyrimidine nucleoside transport protein TERM 2801 2491123 - 2491161 + T 100 -10.6 -5.055 | opp_overlap 2491123 2491126 AATATCGAAATTAAA TAACCTAGAACTTC CAATTTATAAA GAAGTTCTAGGTTA TTTTTTGCAAATTGA TERM 2802 2491161 - 2491123 - T 95 -11.3 -4.10159 | opp_overlap 2491123, overlap 2491126 AATATCGAAATTAAA TAACCTAGAACTTCC AATTTATAA AGAAGTTCTAGGTTA TTTTTTGCAAATTGA TERM 2803 2491158 - 2491126 - T 81 -8.6 -4.15998 | opp_overlap 2491123, overlap 2491123 ATCGAAATTAAATAA CCTAGAACTTCC AATTTATAA AGAAGTTCTAGG TTATTTTTTGCAAAT SH2489 2491768 - 2491214 - | glutamine amidotransferase subunit PdxT SH2490 2492659 - 2491772 - | pyridoxine biosynthesis protein SH2491 2492760 - 2494121 + | hypothetical protein TERM 2804 2494128 - 2494164 + T 78 -9.5 -3.11584 | opp_overlap 2494130, overlap 2494126 2494125 ACTGTATAGTGAAAA AAGCACGTCCATAAGTT AAA AACTTATCGACGTGCCA TCGTTTATATTAAGT TERM 2805 2494162 - 2494130 - T 100 -16.5 -5.1287 | opp_overlap 2494128 2494126 2494125 TGTATAGTGAAAAAA GCACGTCCATAAGTT AAA AACTTATCGACGTGC CATCGTTTATATTAA SH2492 2494559 - 2494203 - | hypothetical protein TERM 2806 2494763 - 2494748 - R 100 -9 -5.64274 | TTAGGCATAAAAAAA GAGACC TTCC GGTCTC AATAATTTGCCTGGC TERM 2807 2495037 - 2495022 - R 100 -9 -5.64274 | TTAGGCATAAAAAAA GAGACC TTTC GGTCTC AATAATTTGCCTGGC TERM 2808 2495311 - 2495296 - R 100 -9 -5.64274 | TTAGGCATAAAAAAA GAGACC TTTC GGTCTC AATAATTTGCCTGGC TERM 2809 2498133 - 2498152 + r 84 -9.4 -3.66803 | opp_overlap 2498132 2498131 GAGTGTCCTACAACC CCAATAAG CAAG CTTATTGG TTTGGGCTCTTCCCG TERM 2810 2498443 - 2498459 + r 80 -8.1 -4.08394 | opp_overlap 2498443 TATGTTTCAACCATA TTAGAAC GTA GTTCTAA TTTTAAGAAACCTGT TERM 2811 2499703 - 2499721 + r 70 -8.8 -2.75963 | overlap 2499702 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT TERM 2812 2500871 - 2500891 + r 79 -9.7 -3.31263 | overlap 2500873 ATTCGAACCCGCGAC CCCCACCTT GGC AAGGTGGTG TTCTACCACTGAACT TERM 2813 2500873 - 2500889 + r 90 -10.9 -3.22475 | overlap 2500871 TCGAACCCGCGACCC CCACCTT GGC AAGGTGG TGTTCTACCACTGAA lysS 2503298 - 2501808 - | lysyl-tRNA synthetase folK 2503981 - 2503502 - | 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase TERM 2814 2503561 - 2503575 + g 75 -7.2 -4.23674 | CAGAGATACGAGTTT TTGAAC GAG GTTCAA TTTGTGTTGGTGCAA folB 2504347 - 2503982 - | dihydroneopterin aldolase folP 2505128 - 2504325 - | dihydropteroate synthase TERM 2815 2505234 - 2505264 + r 70 -5.4 -4.56978 | opp_overlap 2505234 2505236, overlap 2505227 2505236 CTTTATACTAAAAAA TAGCTGGCTTCG CCTTTTA CGAAACCAGCCA TTTCTTATTTAAAAC TERM 2816 2505264 - 2505234 - R 100 -10.5 -5.21709 | opp_overlap 2505227 2505234 2505236, overlap 2505236 CTTTATACTAAAAAA TAGCTGGCTTCGC CTTTT ACGAAACCAGCCA TTTCTTATTTAAAAC TERM 2817 2505262 - 2505236 - R 95 -10.9 -4.23988 | opp_overlap 2505234 2505227 2505236, overlap 2505234 TTATACTAAAAAATA GCTGGCTTCGC CTTTT ACGAAACCAGC CATTTCTTATTTAAA cysK 2506242 - 2505310 - | cysteine synthase TERM 2818 2506429 - 2506402 - R 86 -6.4 -5.24129 | opp_overlap 2506402 2506393 TTTCCCTATAAAAAA GGCAATAAAC ACGTGATG GTTTATCGCC TTTAGTATATTTTTA SH2498 2507330 - 2506446 - | hypothetical protein TERM 2819 2507067 - 2507041 - G 100 -10.9 -4.28774 | opp_overlap 2507039 TCATTTAATGGAAAA TGCGTTTGTGG TTTAT CCACATACGCA CGTACATTACCCTCA SH2499 2507468 - 2507400 - | hypothetical protein TERM 2820 2507548 - 2507510 - R 100 -13.4 -5.24989 | CTACATATTAAAAAA TCTCCTTTGACTAAGG GGAATTG CCTTACTCAAAGGAGA TAATAATCCAGTTTA ftsH 2509750 - 2507567 - | cell-division protein TERM 2821 2509801 - 2509791 - R 71 -4 -5.16151 | TAAAGCTAACAAAAA TTGT AAC ACAA CACTTCTCTTAAAGG SH2501 2510552 - 2510013 - | putative hypoxanthine-guanine phosphoribosyltransferase SH2502 2511851 - 2510556 - | hypothetical protein TERM 2822 2511955 - 2511915 - R 100 -14.4 -5.53991 | gap 1, opp_overlap 2511929 TAGTCATCAAAAAAA GAGTGGAAC-TAAAATTCA TTGT TGAATTTTAAGTTCCACCC CGCAAAAATAACATA SH2503 2512476 - 2512075 - | hypothetical protein TERM 2823 2512240 - 2512251 + g 83 -2.2 -5.7946 | TTGTGGTCTACGAGG GCGA TCTT TTGC TTTTTTTATTGAAAG SH2504 2513000 - 2512605 - | hypothetical protein SH2505 2513299 - 2513021 - | hypothetical protein SH2506 2514486 - 2513296 - | hypothetical protein TERM 2824 2514344 - 2514373 + g 73 -9.5 -2.87944 | opp_overlap 2514342 CTTTCGAATTTAAGT TCATCTTGTAATT GATT AATTACAGGATGG TCTAGTGTCCTAGTA SH2507 2516099 - 2514486 - | hypothetical protein mfd 2519592 - 2516083 - | transcription-repair coupling factor pth 2520161 - 2519589 - | peptidyl-tRNA hydrolase TERM 2825 2520308 - 2520267 - R 100 -16.2 -5.21506 | gap 1 ATAATAACACAAAAA GGGAGTAGAACA-GAATTC ATTAA GAATTCATGTTCCACTCCC ATAAAGATAACAATC rplY 2520995 - 2520330 - | 50S ribosomal protein L25/general stress protein Ctc TERM 2826 2520909 - 2520927 + g 70 -8.2 -3.22832 | opp_overlap 2520908 2520906, overlap 2520905 2520911 ATAACCATAAACTAC TGCAGGTA CTT TACCTGTA TTACGTAATTTTTTA TERM 2827 2520911 - 2520925 + g 73 -8.6 -3.15726 | opp_overlap 2520908 2520906, overlap 2520909 2520905 AACCATAAACTACTG CAGGTA CTT TACCTG TATTACGTAATTTTT TERM 2828 2521068 - 2521103 + r 70 -5.6 -4.34737 | gap 1, overlap 2521079 TTCTGGACTTCCCTT CACTTACCCATCAACTT TAT AAGTTGCTTG-TAAGTG TTTATTAGTTCGTAA prs 2522144 - 2521179 - | ribose-phosphate pyrophosphokinase gcaD 2523611 - 2522256 - | hypothetical protein TERM 2829 2523801 - 2523770 - R 100 -11 -4.70659 | CTTGATATTTAAAAA GCAGGTTCAACA AATTTAAA TGCTGAACCTGC CATAATGTATGATTT TERM 2830 2523822 - 2523849 + r 72 -4.8 -4.9792 | opp_overlap 2523823, overlap 2523823 TGTATGATTTATTTA AGCTTCGTCTGA ATCT TCTGATGAAGCA TTTTTATCTGGAATA TERM 2831 2523823 - 2523848 + r 74 -8.3 -3.58029 | opp_overlap 2523823, overlap 2523822 GTATGATTTATTTAA GCTTCGTCTGA ATCT TCTGATGAAGC ATTTTTATCTGGAAT spoVG 2524121 - 2523819 - | regulatory protein SpoVG SH2514 2524569 - 2524189 - | translation initiation inhibitor purR 2525411 - 2524587 - | purine operon repressor TERM 2832 2525346 - 2525332 - G 80 -2.9 -5.60993 | opp_overlap 2525332 TTTTTCACAAAAAAA GTTAA AGGTA TTAAC TGATTTGGATGATTC SH2516 2526276 - 2525428 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2833 2526535 - 2526507 - R 100 -11.1 -5.60993 | TCTTCTACAAAAAAA GAGTGTTGAACTT AAT AAGCCCAACACCC AATACATTTTAATTA SH2517 2526856 - 2526593 - | hypothetical protein ksgA 2527846 - 2526956 - | dimethyladenosine transferase SH2519 2528398 - 2527850 - | hypothetical protein SH2520 2529311 - 2528541 - | TatD related DNase metS 2531320 - 2529341 - | methionyl-tRNA synthetase TERM 2834 2531130 - 2531140 + g 71 -3.2 -5.17507 | AATTCAGTTTTACCT GCTT TTT GAGC TTTTTCTTGAATTTT TERM 2835 2531500 - 2531479 - R 74 -8.9 -2.77701 | opp_overlap 2531476 ATCCTATTAACATTA CCATAAATT TATT AATTTATGG GGGATTTCATAAGAT SH2522 2532414 - 2531572 - | hypothetical protein SH2523 2532665 - 2532417 - | hypothetical protein SH2524 2533383 - 2532658 - | hypothetical protein SH2525 2533939 - 2533541 - | DNA replication intiation control protein YabA SH2526 2534758 - 2533955 - | hypothetical protein SH2527 2535686 - 2534760 - | hypothetical protein SH2528 2536286 - 2535957 - | hypothetical protein SH2529 2536931 - 2536320 - | hypothetical protein SH2530 2538273 - 2536933 - | hypothetical protein SH2531 2538830 - 2538297 - | hypothetical protein TERM 2836 2539000 - 2538985 - R 100 -9 -5.60993 | TTGTGCATAAAAAAA GAGACC TTTC GGTCTC GATATCGGCTCATCG TERM 2837 2541843 - 2541862 + r 84 -9.4 -3.66803 | opp_overlap 2541842 2541841 GAGTGTCCTACAACC CCAATAAG CAAG CTTATTGG TTTGGGCTCTTCCCG TERM 2838 2542153 - 2542169 + r 80 -8.1 -4.08394 | opp_overlap 2542153 TATGTTTCCACCATA TTAGAAC GTA GTTCTAA TTTTAAGAAACCTGT TERM 2839 2543391 - 2543409 + r 70 -8.8 -2.75963 | overlap 2543390 AGTTTCCAATGACCC TCCACGGT TGA GCCGTGGG CTTTCACATCAGACT recR 2545132 - 2544536 - | recombination protein RecR TERM 2840 2545083 - 2545046 - G 75 -8.4 -3.89412 | opp_overlap 2545045 2545046 ATCTAAAGTATGAAA TGCCAGACGTTGAGCC GTCTTG GGACCAATGCCTGGCA GTTTCATGAAACTAT SH2533 2545456 - 2545139 - | hypothetical protein dnaX 2547324 - 2545609 - | DNA polymerase III gamma and tau subunits SH2535 2547920 - 2547393 - | hypothetical protein TERM 2841 2548052 - 2548019 - R 74 -3.9 -5.37043 | gap 1, opp_overlap 2548019, overlap 2548020 2548022 ATTCTATACAAAAAA CG-AGCCTGGGACA AAATCAA TGTCTCAGGCTACA ATTATATATTGGTAG TERM 2842 2548048 - 2548022 - R 73 -8 -3.48081 | opp_overlap 2548019, overlap 2548020 2548019 CTATACAAAAAACGA GCCTGGGACA AAATCAA TGTCTCAGGC TACAATTATATATTG SH2536 2549311 - 2548586 - | hypothetical protein SH2537 2550978 - 2549344 - | alpha-glucosidase TERM 2843 2549550 - 2549575 + g 74 -9.1 -3.1478 | opp_overlap 2549542, overlap 2549548 CCATATACATCGGCT CGATATCACCA TATG TGATGATATCG TGTTCATGACGTAAT TERM 2844 2551093 - 2551106 + r 74 -2.3 -5.58209 | overlap 2551092 CGCTACAGTTTCGTC TGGCG TTGC CACCA TTTTTTTAGCTTTAA treP 2552520 - 2551072 - | phosphoenolpyruvate-dependent and trehalose-specific PTS enzyme II TERM 2845 2552641 - 2552611 - R 100 -14.2 -5.20783 | opp_overlap 2552611 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 2846 2552611 - 2552641 + r 100 -16.4 -4.30987 | opp_overlap 2552611 ATTCAAACATAAAAA TTGGACTGATGATT TTT AGTCATCAGTCCAA TTTATTATAGAGCCT TERM 2847 2552699 - 2552663 - R 100 -14 -5.08169 | opp_overlap 2552663 ATAGAGCCTAAAAAA GACAAGTACTCAATAT GTTAT AAATTGAGTACTTGTC TTTTTTATATTTATT TERM 2848 2552663 - 2552699 + r 100 -14.7 -5.61913 | opp_overlap 2552663 ATAGAGCCTAAAAAA GACAAGTACTCAATATG TTA TAAATTGAGTACTTGTC TTTTTTATATTTATT gltD 2554404 - 2552941 - | glutamate synthase subunit beta TERM 2849 2553083 - 2553098 + g 76 -4 -5.27476 | TTAGTGCGATAATCT TTATCG TTGG CGATGA TTTTATTTTGTTGGG gltB 2558943 - 2554423 - | glutamate synthase large subunit gltC 2559101 - 2559994 + | transcription activator of glutamate synthase operon TERM 2850 2560515 - 2560489 - g 79 -4.4 -5.37043 | opp_overlap 2560489, overlap 2560490 ATCTTAGAGAAAAAA CGCGATAGCT TAACTGT AGCAATCGCA GGTATATTCATTATG SH2542 2560114 - 2561235 + | hypothetical protein TERM 2851 2561385 - 2561397 + G 84 -6.3 -5.1925 | GGAACACCTATTTAC CTAGT TTC ACTAG TTTTTTGCATTGTCA SH2543 2561232 - 2562026 + | hypothetical protein TERM 2852 2562122 - 2562083 - T 82 -8 -4.57073 | opp_overlap 2562082 2562085, overlap 2562085 CAGTTCTCTCAAAAA TAGCCAGTAAATGAGTCT TGAT AAATTCATTCACTGGCTT GTTTATTTATAAGCA TERM 2853 2562085 - 2562120 + T 83 -8.4 -4.38748 | opp_overlap 2562083 2562085, overlap 2562082 GTTCTCTCAAAAATA GCCAGTAAATGAGTCT TGAT AAATTCATTCACTGGC TTGTTTATTTATAAG TERM 2854 2562120 - 2562085 - T 91 -10.6 -3.90048 | opp_overlap 2562085 2562082, overlap 2562083 GTTCTCTCAAAAATA GCCAGTAAATGAGTCT TGAT AAATTCATTCACTGGC TTGTTTATTTATAAG SH2544 2562603 - 2562139 - | hypothetical protein SH2545 2563000 - 2562611 - | hypothetical protein SH2546 2563129 - 2563407 + | hypothetical protein TERM 2855 2563456 - 2563417 - T 100 -13.3 -5.55695 | gap 1, opp_overlap 2563417 CAATAATATAAAAAA GCTAATCAAAA-GAAGTA AAGTA TACTTCCTTTTGATTAGC TTTTTTTGATAAATT TERM 2856 2563417 - 2563456 + T 100 -13.3 -5.54894 | gap 1, opp_overlap 2563417 CAATAATATAAAAAA GCTAATCAAAA-GAAGTA AAGTA TACTTCCTTTTGATTAGC TTTTTTTGATAAATT SH2547 2564459 - 2563470 - | hypothetical protein TERM 2857 2564727 - 2564741 + r 72 -7.2 -3.99986 | opp_overlap 2564727 2564726 AAGTGTATAACACAT TCTCAA CTA TTGAGA TTTAACTTTTATTAA TERM 2858 2564799 - 2564760 - R 83 -7.9 -4.73388 | overlap 2564764 AACTTTTATTAAAAA TTAAGAGGGTGGAACAA AATTGA TTGTCCCACCCCCATAT GGCTGACTAGAGTTG TERM 2859 2564795 - 2564764 - R 100 -13.1 -3.84901 | overlap 2564760 TTTATTAAAAATTAA GAGGGTGGAACAA AATTGA TTGTCCCACCCCC ATATGGCTGACTAGA metB 2566044 - 2564899 - | cystathionine gamma-synthase cysM 2566943 - 2566047 - | hypothetical protein SH2550 2567217 - 2567747 + | hypothetical protein TERM 2860 2568198 - 2568225 + G 79 -4.2 -5.24129 | overlap 2568201 CAAAGAAGTAAGGAA GATTTAGTGTAC GGTC GTACGTTAATTC TTTTTTCTGAAAAAG TERM 2861 2568201 - 2568222 + G 70 -4.5 -4.72201 | overlap 2568198 AGAAGTAAGGAAGAT TTAGTGTAC GGTC GTACGTTAA TTCTTTTTTCTGAAA SH2551 2567868 - 2568407 + | hypothetical protein TERM 2862 2568440 - 2568415 - T 100 -12.7 -5.2189 | opp_overlap 2568415 TCAATTAGTAAAAAA GGTTAGCCACA TATG TGTGACTAACC TTTTTATATTGTATG TERM 2863 2568415 - 2568440 + T 100 -10.5 -5.1764 | opp_overlap 2568415 TCAATTAGTAAAAAA GGTTAGCCACA TATG TGTGACTAACC TTTTTATATTGTATG SH2552 2569710 - 2568460 - | hypothetical protein SH2553 2569939 - 2570226 + | hypothetical protein TERM 2864 2570345 - 2570376 + T 79 -6.6 -4.70046 | opp_overlap 2570345 2570347, overlap 2570347 TTAAACATTAAAATA GAGGCTGGGACA AAATAAAA TGTCTCAGCCTA TTTTATCATTTTGTC TERM 2865 2570347 - 2570374 + T 84 -9.2 -3.9392 | opp_overlap 2570345 2570347, overlap 2570345 AAACATTAAAATAGA GGCTGGGACA AAATAAAA TGTCTCAGCC TATTTTATCATTTTG TERM 2866 2570416 - 2570428 + T 89 -7.7 -5.02074 | CTGATTTGAAAATGC GCTTG AAT CAAGC TTTTTTCAAACCTAG SH2554 2570783 - 2570535 - | hypothetical protein SH2555 2571529 - 2570798 - | hypothetical protein SH2556 2572453 - 2571596 - | hypothetical protein SH2557 2573172 - 2572486 - | hypothetical protein TERM 2867 2572740 - 2572724 - G 85 -9.5 -4.01737 | ATTAACAATATTAAA GCAAGTA ACG TACTTGC ATTAGAATGCCCACT TERM 2868 2573142 - 2573159 + g 72 -4.9 -4.70887 | TAGGCAACGTCATCT TAGGTGA AATT TCACTTA TTTGTTTATTCATAC SH2558 2573924 - 2573232 - | hypothetical protein TERM 2869 2574087 - 2574046 - R 91 -9.8 -4.2349 | gap 2, opp_overlap 2574046 2574045 CGTTTATACTTAAAA GCACCCTACAAAGTCAGCAT AATA AT-CTAACTTT-TAGGGTGC CTCTTTAAAATTGTA SH2559 2574486 - 2574124 - | hypothetical protein SH2560 2577126 - 2574556 - | hypothetical protein TERM 2870 2576805 - 2576815 + g 76 -6.8 -4.62783 | TAGGCAAATCTTTGA TGCG CAT CGCA TTTTTACAATAAATA TERM 2871 2577165 - 2577183 + r 72 -7.4 -3.96452 | AATTCTTTAAGTAGT TCGGATGA CTT TCAACCGA TTTAAATTTTGCTTC ndhF 2578641 - 2577142 - | NADH dehydrogenase subunit 5 TERM 2872 2578584 - 2578572 - G 83 -4.9 -5.52986 | ATGGCACTAAAAAAA TTAAG CCA CTTAA CACTGCAATGACAAG TERM 2873 2579284 - 2579261 - R 100 -12.6 -5.37043 | opp_overlap 2579261 ATTCCATATAAAAAA GAGTGAAATC GGAT GATTTCACTC TTTTTTTGTGCATAC TERM 2874 2579261 - 2579284 + r 100 -12.6 -5.64274 | opp_overlap 2579261 ATTCCATATAAAAAA GAGTGAAATC GGAT GATTTCACTC TTTTTTTGTGCATAC TERM 2875 2579337 - 2579308 - R 95 -8.7 -5.05113 | TGCATACAAACAAAA CGCTCAATCCCTA TATA TAAGAATTGAACG TCAGTGGATAAAATG SH2562 2579669 - 2579598 - | hypothetical protein SH2563 2579776 - 2579955 + | hypothetical protein SH2564 2580848 - 2580333 - | hypothetical protein TERM 2876 2580907 - 2580874 - H 93 -8.3 -5.21709 | gap 1 TCTCATATTAAAAAA GGCTAGAAAC-CCTAT CAC AAAGGTATTTCTAGCC TAAAATTACATTTTA TERM 2877 2581155 - 2581136 - H 100 -7.9 -5.79588 | TTAAAACTAAAAAAA CCACATC AATTAA GATGTGG CGAAAGGGGTTCGAA TERM 2878 2581317 - 2581290 - H 89 -7.9 -5.16133 | gap 1 ATCATAACATAAAAA TTGAGGC-AATC GCTAG GATTTGCCTCAA TAAAAGGAAAAGTTT TERM 2879 2581359 - 2581385 + G 87 -9.7 -4.06055 | GTGTTAAAACATTTC TATATGTTGAA GGGAA TTCAACATATA TTTAATTTACCACAT SH2565 2581338 - 2581445 + | hypothetical protein TERM 2880 2581491 - 2581479 - T 80 -6.2 -4.91109 | TTTTCATTATAAAAA GGGC ATTAA GCCC CTCGAGTCTTATGCC SH2566 2581931 - 2581827 - | hypothetical protein TERM 2881 2581874 - 2581899 + g 100 -11.3 -5.4492 | opp_overlap 2581872 CATAAAATAAACTCT CCTCATTAGTC AATT GATTAATGAGG TTTTTTGTATATATA TERM 2882 2581949 - 2581915 - G 88 -13.1 -2.98823 | opp_overlap 2581920, overlap 2581920 TTTTTTGTATATATA TAAAAGAGACCAACC ATTAA GGTTAGCCTCTTTTA ACAATTACATATCCA TERM 2883 2581944 - 2581920 - G 93 -8.6 -4.64844 | opp_overlap 2581920, overlap 2581915 TGTATATATATAAAA GAGACCAACC ATTAA GGTTAGCCTC TTTTAACAATTACAT TERM 2884 2582478 - 2582462 - g 76 -4.5 -5.04385 | overlap 2582463 TATACTGGTAAAAAA CCTATAA CCT TTATAGA CGCTCTTTTTATTGC TERM 2885 2582837 - 2582847 + G 74 -6.8 -4.32034 | overlap 2582843 2582844 ATAAGTTTATTTACT GCTG TAT CAGC TTTTAATAATGCTGG SH2567 2582360 - 2583667 + | hypothetical protein TERM 2886 2583674 - 2583702 + T 72 -6 -4.62441 | opp_overlap 2583675, overlap 2583675 CATATTTAATAACAA AGCCTCCTCTAT GAAAA ATAGAGAAGGCC TTTATTTATATCAAA TERM 2887 2583675 - 2583701 + T 82 -9.5 -3.36742 | opp_overlap 2583675, overlap 2583674 ATATTTAATAACAAA GCCTCCTCTAT GAAAA ATAGAGAAGGC CTTTATTTATATCAA TERM 2888 2583701 - 2583675 - T 100 -11.7 -4.47456 | opp_overlap 2583675 2583674 ATATTTAATAACAAA GCCTCCTCTAT GAAAA ATAGAGAAGGC CTTTATTTATATCAA TERM 2889 2583751 - 2583765 + T 95 -8.6 -4.94147 | opp_overlap 2583749 2583748 2583751 GTAATATTAAAAGCA TGGAGT GTA ACTCCA TTTTCTTCTATTATT TERM 2890 2583765 - 2583751 - T 74 -8.6 -3.18389 | opp_overlap 2583751, overlap 2583749 2583748 GTAATATTAAAAGCA TGGAGT GTA ACTCCA TTTTCTTCTATTATT SH2568 2584127 - 2583858 - | hypothetical protein SH2569 2584705 - 2584133 - | hypothetical protein SH2570 2585045 - 2584707 - | hypothetical protein SH2571 2585491 - 2585042 - | hypothetical protein TERM 2891 2585235 - 2585248 + g 84 -3.9 -5.65496 | overlap 2585230 CTATTCGATTTTGTT TTGAA ACAA TTCAA TTTTTCTTTTTCATC SH2572 2585581 - 2585546 - | hypothetical protein tnp 2586066 - 2587238 + | transposase for IS256 SH2574 2587296 - 2587892 + | hypothetical protein tnp 2589048 - 2587876 - | transposase for IS256 SH2576 2589111 - 2589563 + | hypothetical protein tnp 2589663 - 2590835 + | transposase for IS256 SH2578 2591133 - 2591300 + | hypothetical protein TERM 2892 2591348 - 2591368 + F 74 -4.1 -5.3104 | TTTAAAAGGAGGTTG TTATGTTAA TAT TTATCATAA TTTTATTTTTGATCA SH2579 2591350 - 2591544 + | hypothetical protein SH2580 2591851 - 2592027 + | hypothetical protein int 2592134 - 2593348 + | integrase TERM 2893 2593498 - 2593468 - T 100 -12 -5.06735 | opp_overlap 2593471, overlap 2593471 TACAAATTACAAAAA CAACCCTCTAACCA TTG TGGTTAAAGGGTTT TATAATTCATATATT TERM 2894 2593495 - 2593471 - T 100 -13.7 -4.59919 | opp_overlap 2593471, overlap 2593468 AAATTACAAAAACAA CCCTCTAACCA TTG TGGTTAAAGGG TTTTATAATTCATAT TERM 2895 2593471 - 2593495 + T 100 -11.5 -4.57209 | opp_overlap 2593471 2593468 AAATTACAAAAACAA CCCTCTAACCA TTG TGGTTAAAGGG TTTTATAATTCATAT guaA 2595055 - 2593514 - | bifunctional GMP synthase/glutamine amidotransferase protein guaB 2596695 - 2595229 - | inositol-monophosphate dehydrogenase pbuX 2598002 - 2596734 - | xanthine permease xprT 2598580 - 2597999 - | xanthine phosphoribosyltransferase TERM 2896 2598641 - 2598613 - H 77 -3.2 -5.71712 | overlap 2598614 TTGTATACAAAAAAA GCCTCAAACTTT GCGAA AAAGTTTCAGGA TCCATGAGCGTACAG TERM 2897 2598640 - 2598614 - H 70 -6.7 -4.01943 | overlap 2598613 TGTATACAAAAAAAG CCTCAAACTTT GCGAA AAAGTTTCAGG ATCCATGAGCGTACA SH2586 2599159 - 2599566 + | hypothetical protein TERM 2898 2599592 - 2599627 + F 100 -12.8 -5.50499 | opp_overlap 2599600 TTTTAAACTTTGAGA CCGTGAAATGAACGTA GTTT TAAGTTCATTTTACGG TTTTTTTCAATCTCA TERM 2899 2599693 - 2599669 - f 80 -8.1 -4.17425 | ACAATGACGTCAAAA TGTTTAAATAT GCT ATACTTAAACA AACTATCGTGGGGGT SH2587 2599715 - 2600383 + | hypothetical protein SH2588 2600502 - 2601152 + | hypothetical protein TERM 2900 2601218 - 2601254 + F 100 -11.2 -5.4387 | gap 2, opp_overlap 2601218 AACTCTTTATACAAA GGTGAGAC-A-GAATTCA TTT TGAATTCATTGTCTCACC TTTTTTCATTTCTAT TERM 2901 2601254 - 2601218 - f 95 -11.2 -4.03978 | gap 2, opp_overlap 2601218 AACTCTTTATACAAA GGTGAGAC-A-GAATTCA TTT TGAATTCATTGTCTCACC TTTTTTCATTTCTAT SH2589 2601440 - 2602828 + | hypothetical protein TERM 2902 2602841 - 2602895 + T 70 -5.4 -4.57482 | opp_overlap 2602841 TAATATTTAAAAAAA GCGTAGCTAAAACATTACAAT-GTTT ATTTC GAACAATTGTAATCATT-AGCTACGC TTTATTTATAAATAG TERM 2903 2602895 - 2602841 - T 91 -6.9 -5.52909 | opp_overlap 2602841 TAATATTTAAAAAAA GCGTAGCTAAAACATTACAAT-GTT TATTTCG AACAATTGTAAT-CATTAGCTACGC TTTATTTATAAATAG SH2590 2603667 - 2602912 - | hypothetical protein SH2591 2603825 - 2604604 + | hypothetical protein TERM 2904 2604655 - 2604696 + F 82 -4.6 -5.71638 | gap 1, opp_overlap 2604655, overlap 2604660 TTAGCCATTATTGAA CGGGATATGAAATCTTCAT AATTA ATGTTGATTTC-TATTCCG TTTTTTTAATTATTC ahpC 2605025 - 2605594 + | alkyl hydroperoxide reductase subunit C TERM 2905 2605833 - 2605783 - g 74 -5.6 -4.70739 | opp_overlap 2605783, overlap 2605785 GAAAAAGAATTAAAA CG-TACACCAAGCTTCTCAGTCAG CAAAC CTGATGAAGAAGCT-GGCGTAACG TTTGCCGGAATTCCA ahpF 2605609 - 2607132 + | alkyl hydroperoxide reductase subunit F TERM 2906 2607219 - 2607245 + F 100 -11.7 -5.39721 | opp_overlap 2607218 2607221 TATCTTCATATATAG CAGAGACGTTT CTTAC AAGCGTCTCTG TTTTTTATGTGATGG TERM 2907 2607357 - 2607374 + F 71 -7.1 -3.71527 | AAATGCCACAAATTG TTCATAG ATGA CTATGAA TTTAAGTACTTAACG SH2594 2607471 - 2608097 + | hypothetical protein TERM 2908 2608163 - 2608136 - T 85 -7.1 -4.99035 | opp_overlap 2608136 CTAGGCACATAAAAA TCCAAACCG TTAAAATATG CGGTTTGGA TTTTTGCGTGTTAAT TERM 2909 2608136 - 2608163 + T 90 -8.6 -4.75308 | gap 1, opp_overlap 2608136 CTAGGCACATAAAAA TCCAAACCGT-TA AAA TATGCGGTTTGGA TTTTTGCGTGTTAAT SH2595 2608775 - 2608197 - | hypothetical protein SH2596 2609428 - 2608799 - | hypothetical protein TERM 2910 2609702 - 2609728 + r 87 -9.4 -4.03995 | overlap 2609700 GAACATAATACTCCT GGGTGACGCC TTAACCC GACGTCACCC TCTTTTTATGCCCAA TERM 2911 2610127 - 2610146 + r 100 -13.6 -4.31433 | opp_overlap 2610127 TTCATTAAATCAAAA CCACCCGT GTGA ACGGGTGG TTTGTTCTACGGCTA TERM 2912 2610146 - 2610127 - R 100 -13.6 -4.58773 | opp_overlap 2610127 TTCATTAAATCAAAA CCACCCGT GTGA ACGGGTGG TTTGTTCTACGGCTA TERM 2913 2610157 - 2610167 + r 70 -6.8 -4.00347 | GGTGGTTTGTTCTAC GGCT ATA AGCC TTCCTTTTTATTTCT tnp 2610533 - 2610213 - | IS605/IS200-like transposase TERM 2914 2610768 - 2610780 + H 76 -9.1 -3.04461 | opp_overlap 2610765 2610762 TAAGGAAATCCAGTA CCACC TTT GGTGG TATTCAGCATAGCTG TERM 2915 2611006 - 2611019 + H 70 -6.7 -4.03885 | overlap 2611011 CTCAGGCGACGTCGA GACTC TTAA GAGTC TTAATTTTTTTAGCC TERM 2916 2611011 - 2611023 + H 79 -4.9 -5.40072 | overlap 2611006 GCGACGTCGAGACTC TTAAG AGT CTTAA TTTTTTTAGCCAAAG TERM 2917 2611464 - 2611447 - g 70 -7.1 -3.79831 | AAAACAAGAAATTAA TCATCAA GTGA TTGATGA AATTGAAGAAGAAAA SH2598 2611334 - 2611483 + | Rep protein SH2599 2611951 - 2611805 - | hypothetical protein SH2600 2612087 - 2612617 + | hypothetical protein SH2601 2612857 - 2613240 + | hypothetical protein TERM 2918 2613300 - 2613287 - f 100 -6.7 -5.63517 | opp_overlap 2613287 TTTTGAAATAAAAAA TCGAC TAAG GTCGA TTATGGTTTTGCACC SH2602 2613379 - 2613639 + | hypothetical protein SH2603 2613807 - 2613953 + | hypothetical protein SH2604 2614148 - 2614243 + | hypothetical protein TERM 2919 2614265 - 2614301 + F 100 -15.3 -2.92463 | opp_overlap 2614266 2614269, overlap 2614269 ATAGCCACACCTACA ACAATCCCCTCACTATT TGC GGTAGTGAGGGGATTGG TGTATCCATGCTGGA TERM 2920 2614300 - 2614266 - f 100 -17.4 -3.39803 | opp_overlap 2614265 2614269, overlap 2614269 TAGCCACACCTACAA CAATCCCCTCACTA TTTGCGG TAGTGAGGGGATTG GTGTATCCATGCTGG TERM 2921 2614269 - 2614297 + F 100 -14.7 -3.32993 | opp_overlap 2614269 2614266, overlap 2614265 CCACACCTACAACAA TCCCCTCACTATT TGC GGTAGTGAGGGGA TTGGTGTATCCATGC TERM 2922 2614297 - 2614269 - f 100 -13.3 -3.83568 | opp_overlap 2614265 2614269, overlap 2614266 CCACACCTACAACAA TCCCCTCACTA TTTGCGG TAGTGAGGGGA TTGGTGTATCCATGC TERM 2923 2614495 - 2614479 - g 84 -8 -4.57073 | TATTGGTCTCAAAAA GGTGCT ACACA AGCACC TAAAAATTTAAGAGA SH2605 2614437 - 2615096 + | hypothetical protein SH2606 2615342 - 2615944 + | hypothetical protein TERM 2924 2616080 - 2616054 - T 79 -6.6 -4.63172 | opp_overlap 2616047 2616054, overlap 2616049 2616047 TAGTAAATGAGAAAA GCAATGTCCTAT ATT AAAGTACATTGC TTTTTCTATTAACGA TERM 2925 2616054 - 2616080 + T 84 -6.6 -5.0916 | opp_overlap 2616054 2616049 2616047, overlap 2616047 TAGTAAATGAGAAAA GCAATGTCCTAT ATT AAAGTACATTGC TTTTTCTATTAACGA SH2607 2616904 - 2616089 - | ATP-binding protein p271 tnp 2618339 - 2616897 - | transposase for Tn552 binL 2618904 - 2618311 - | DNA-invertase TERM 2926 2619067 - 2619038 - H 73 -8 -3.48985 | opp_overlap 2619038, overlap 2619036 AGACATAAAAAACGA GTGTACAGAAAA TGGTTG TATTCTGTACAC TTTTTTAATACAAGT TERM 2927 2619038 - 2619067 + H 95 -8.7 -5.14965 | opp_overlap 2619038 2619036 AGACATAAAAAACGA GTGTACAGAAAAT GGTT GTATTCTGTACAC TTTTTTAATACAAGT SH2610 2619289 - 2619690 + | hypothetical protein TERM 2928 2619711 - 2619728 + G 70 -2.1 -5.26316 | gap 1 GACGGCCCGTGAACT TTAT-AGC ATG GCTTATAA TTTTTTGTGAAATAG SH2611 2619704 - 2620240 + | hypothetical protein TERM 2929 2620327 - 2620366 + T 84 -11 -2.62192 | gap 1, opp_overlap 2620327 2620333, overlap 2620328 2620333 AGGTATTCGATAATA GA-AAAAGCAACGCATTTT AAT ATAGTGCGTTGCTTTTCTC ATTGATTAGGTAAAG TERM 2930 2620366 - 2620327 - T 74 -8.8 -3.23572 | gap 1, opp_overlap 2620327 2620328 2620333, overlap 2620333 AGGTATTCGATAATA GA-AAAAGCAACGCATTTT AAT ATAGTGCGTTGCTTTTCTC ATTGATTAGGTAAAG TERM 2931 2620328 - 2620364 + T 83 -10.3 -2.8507 | opp_overlap 2620327 2620333, overlap 2620327 2620333 GGTATTCGATAATAG AAAAAGCAACGCATTTT AAT ATAGTGCGTTGCTTTTC TCATTGATTAGGTAA TERM 2932 2620359 - 2620333 - T 91 -8 -5.1523 | opp_overlap 2620328 2620327 2620333, overlap 2620327 TCGATAATAGAAAAA GCAACGCATTTT AAT ATAGTGCGTTGC TTTTCTCATTGATTA TERM 2933 2620333 - 2620359 + T 93 -10.2 -4.58213 | opp_overlap 2620333 2620327, overlap 2620328 2620327 TCGATAATAGAAAAA GCAACGCATTTT AAT ATAGTGCGTTGC TTTTCTCATTGATTA SH2612 2621159 - 2620599 - | hypothetical protein TERM 2934 2621982 - 2621971 - g 77 -3 -5.54338 | GAATTAAAACAAAAA TTCA ATGT TGAA ACAATAGAAGAAGTC SH2613 2621302 - 2622030 + | hypothetical protein TERM 2935 2622122 - 2622133 + G 74 -3 -5.34655 | ACCTTTATTAGTCCT TACA TTAA TGTA TTTTATTTTTAATTC SH2614 2622027 - 2623112 + | hypothetical protein SH2615 2623114 - 2623257 + | hypothetical protein TERM 2936 2623430 - 2623402 - T 70 -6.7 -3.90761 | opp_overlap 2623427, overlap 2623427 TAATTTAGACAACAA GAGCTTCGTGCAT TAT ATGCACCAATCCC CTCACTACTCGCAAT TERM 2937 2623455 - 2623427 - T 100 -16.9 -3.20858 | opp_overlap 2623427, overlap 2623402 CATTATATGCACCAA TCCCCTCACTACT CGC AATAGTGAGGGGA TTTTTAGGTGCTGGC TERM 2938 2623427 - 2623455 + T 100 -14.7 -4.68593 | opp_overlap 2623402 2623427 CATTATATGCACCAA TCCCCTCACTACT CGC AATAGTGAGGGGA TTTTTAGGTGCTGGC SH2616 2623581 - 2623480 - | hypothetical protein TERM 2939 2623924 - 2623892 - R 100 -6.4 -6.23545 | TTTAAATAAAAAAAA CGTGAAGTAAGC GAATTTGCA ACTTACCTCACG GTGTATACCTAAAAT SH2617 2624428 - 2623943 - | hypothetical protein TERM 2940 2624243 - 2624261 + g 76 -4.6 -5.02502 | AGTAAAATTATCGTA TTTCAATG ACT CTTTGAAA TTTTTGTCTAATATA tnp 2625030 - 2624620 - | IS1272 transposase TERM 2941 2624701 - 2624733 + gr 93 -8 -5.35222 | opp_overlap 2624701 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT TERM 2942 2624733 - 2624701 - GR 95 -8 -5.55698 | opp_overlap 2624701 GATAAGTGAAAAAAA GACAATTTCTAT TGAAATAAT ATAGAAATTGTC TTTTTTATAAATTTT tnp 2626328 - 2624994 - | IS1272 transposase TERM 2943 2625442 - 2625428 - GH 77 -5.8 -4.75289 | CATTATAAGATAAAA CAAATT GGG AATTTG TCGCTATTTGTAAAT TERM 2944 2626196 - 2626212 + gH 71 -8.1 -3.32066 | CACCACGGTGATGTC TGAATTC GTC GAATTCA TTGTCAGGAATTGTT TERM 2945 2626546 - 2626576 + H 100 -14.2 -5.20783 | opp_overlap 2626546 GGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2946 2626576 - 2626546 - H 100 -16.4 -4.30719 | opp_overlap 2626546 GGGCTCTATAATAAA TTGGACTGATGACT AAA AATCATCAGTCCAA TTTTTATGTTTGAAT TERM 2947 2626720 - 2626706 - g 76 -3.6 -5.23644 | AATTAAAGATAAAAA TCTAAA TTT TTCAGA TGAAGTGATTGAGAA tnp 2626662 - 2627375 + | transposase for ISSha1 TERM 2948 2627980 - 2627950 - g 100 -9.2 -5.95946 | opp_overlap 2627949 TCAACAACAAAAAAA GAGATTAAAAAACT TAA AGTTGCTTAATCTC AATATTTGGACTCAT tnp 2627452 - 2627976 + | transposase for ISSha1 TERM 2949 2628026 - 2628065 + T 72 -6.6 -4.07562 | opp_overlap 2628029, overlap 2628028 2628029 TAGAGCCAAATAAAG AAACCAGTAAATGAATTT GTTA AAACTCATTTACTGGCTA TTTCTCTAGGGTTTA TERM 2950 2628028 - 2628063 + T 80 -9.2 -3.62348 | opp_overlap 2628029, overlap 2628026 2628029 GAGCCAAATAAAGAA ACCAGTAAATGAATTT GTTA AAACTCATTTACTGGC TATTTCTCTAGGGTT TERM 2951 2628029 - 2628062 + T 100 -12.7 -2.76686 | opp_overlap 2628029, overlap 2628028 2628026 AGCCAAATAAAGAAA CCAGTAAATGAATTT GTTA AAACTCATTTACTGG CTATTTCTCTAGGGT TERM 2952 2628062 - 2628029 - T 100 -14.9 -4.7923 | opp_overlap 2628028 2628026 2628029 AGCCAAATAAAGAAA CCAGTAAATGAATTT GTTA AAACTCATTTACTGG CTATTTCTCTAGGGT SH2622 2628353 - 2628105 - | hypothetical protein TERM 2953 2628432 - 2628446 + r 76 -4.4 -5.29846 | opp_overlap 2628434 GAATAAACATTAGGA TATAAT TTT ATTATA TTTTTATTTAAACTT SH2623 2629280 - 2629071 - | 2-pyrone-4,6-dicarboxylic acid hydrolase SH2624 2629496 - 2629753 + | hypothetical protein TERM 2954 2629767 - 2629798 + F 100 -8.8 -5.33785 | opp_overlap 2629766 AATTTCTATTAAATG CCTGTCATACTATA TATT TAGTGTATGACAGG TTTTTTATCATAATT SH2625 2629956 - 2631026 + | hypothetical protein TERM 2955 2631115 - 2631061 - T 100 -16 -3.38272 | opp_overlap 2631068, overlap 2631063 2631068 TATTAGTATTTATAA TATCGAATCCCCACCGATACTAAATT ATT AATTTAGTATCGGTGGGGATTTTCTT GATATAGTACAACTT TERM 2956 2631113 - 2631063 - T 100 -18.6 -3.25896 | opp_overlap 2631068, overlap 2631061 2631068 TTAGTATTTATAATA TCGAATCCCCACCGATACTAAATT ATT AATTTAGTATCGGTGGGGATTTTC TTGATATAGTACAAC TERM 2957 2631068 - 2631108 + T 100 -27.3 -4.76075 | opp_overlap 2631063 2631061 2631068 ATTTATAATATCGAA TCCCCACCGATACTAAATT ATT AATTTAGTATCGGTGGGGA TTTTCTTGATATAGT TERM 2958 2631108 - 2631068 - T 100 -27.3 -3.21993 | opp_overlap 2631068, overlap 2631063 2631061 ATTTATAATATCGAA TCCCCACCGATACTAAATT ATT AATTTAGTATCGGTGGGGA TTTTCTTGATATAGT TERM 2959 2631229 - 2631197 - T 82 -5.5 -5.38497 | opp_overlap 2631201, overlap 2631201 ATTCAAAGCAAAAAA GTAACCCCATAAGCC TTA AGCCTACGGGGTTTA ACCAATACTTATATA TERM 2960 2631225 - 2631201 - T 95 -10.7 -4.00212 | opp_overlap 2631201, overlap 2631197 AAAGCAAAAAAGTAA CCCCATAAGCC TTA AGCCTACGGGG TTTAACCAATACTTA rpsR 2631487 - 2631245 - | 30S ribosomal protein S18 TERM 2961 2631348 - 2631367 + g 73 -8.6 -3.32844 | opp_overlap 2631348 GTACCAGTTACACGA CGTGGTAA AATT TTACCGCG TTCTGAGATAAAACG ssb 2632047 - 2631535 - | single-strand DNA-binding protein of phage phi PVL TERM 2962 2631571 - 2631592 + g 79 -9.5 -3.4082 | opp_overlap 2631564 ACTAATATCAATCGG TCCGTTTGC GTTT GCAAATGGA TTATCAGATTGTTTA rpsF 2632365 - 2632069 - | 30S ribosomal protein S6 TERM 2963 2632810 - 2632799 - g 71 -3 -5.19916 | AAAATATCTAAAAAA TCAT CCCA ATGA ACAAAGCAACGCTAC TERM 2964 2632970 - 2632950 - g 86 -5.5 -5.73672 | opp_overlap 2632955 AAACAACTAAAAAAA GATTATGAT TTC ATCATTATC AGAGGTCAATATGGT SH2629 2632656 - 2633462 + | hypothetical protein SH2630 2633528 - 2633719 + | hypothetical protein TERM 2965 2633749 - 2633794 + T 84 -3.5 -5.89659 | gap 2, opp_overlap 2633749 AACAATATAAAAAAA GCAATGTAAGTCTC-CT-GTC ATTCAA GCCAAGCGAAACTTACATTGC TTTTTATTTTTTTAT TERM 2966 2633794 - 2633749 - T 95 -5.7 -5.86465 | gap 2, opp_overlap 2633749 AACAATATAAAAAAA GCAATGTAAGTCTC-CT-GTC ATTCAA GCCAAGCGAAACTTACATTGC TTTTTATTTTTTTAT SH2631 2634958 - 2633861 - | translation-associated GTPase SH2632 2635173 - 2634970 - | hypothetical protein SH2633 2636076 - 2635195 - | hypothetical protein TERM 2967 2635535 - 2635517 - G 73 -9 -3.19138 | overlap 2635515 AAACCATTAGTAATA GAGAAATT AGT AATTTCTC CCATACTACCATTCG SH2634 2637087 - 2636257 - | hypothetical protein TERM 2968 2637435 - 2637423 - H 70 -4.9 -4.72373 | TTAAAAAAACACAAA TTACA CAC TGTAA TAAGGAAAGTAGAAC TERM 2969 2637636 - 2637664 + H 74 -4.1 -5.21709 | gap 1, opp_overlap 2637636 TAATCATCGTTAATA CTCATTTA-CTT ATAATC AAGTTAAATGAG TTTTTTAATGTGAAC TERM 2970 2637864 - 2637815 - H 82 -9.3 -3.36515 | opp_overlap 2637808 2637816, overlap 2637813 2637816 TGGTACCGCGAAACA GGCTTTCGTCCTTTACATCCGAT GCAT ATCGGGTTTAAAGGACGGGAGCT TTTTTTATTGGACAA TERM 2971 2637816 - 2637863 + H 100 -19.4 -5.7946 | opp_overlap 2637815 2637813 2637816, overlap 2637808 GGTACCGCGAAACAG GCTTTCGTCCTTTACATCCGAT GCAT ATCGGGTTTAAAGGACGGGAGC TTTTTTTATTGGACA TERM 2972 2637863 - 2637816 - H 100 -12.8 -2.61695 | opp_overlap 2637808 2637816, overlap 2637815 2637813 GGTACCGCGAAACAG GCTTTCGTCCTTTACATCCGAT GCAT ATCGGGTTTAAAGGACGGGAGC TTTTTTTATTGGACA TERM 2973 2638760 - 2638774 + G 80 -7.2 -4.60924 | opp_overlap 2638753 2638759 2638760, overlap 2638767 CGTCTAAATAAAGAC TTTAGC GTT GCTAAA TTTTTGGAAAATTTA SH2635 2637902 - 2639005 + | hypothetical protein SH2636 2639002 - 2640177 + | hypothetical protein TERM 2974 2640414 - 2640404 - gf 72 -6.8 -4.14739 | GTAGCCATCGCAAAA CGTG CCG CACG ACCTGATACTTTCAT TERM 2975 2641400 - 2641388 - gf 78 -7.7 -4.09685 | overlap 2641373 2641391 GGTGACCCTTCAAAA GTAGG CCA CCTAC CCGGTGCCACGAATG SH2637 2640131 - 2641969 + | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein metE 2641966 - 2644215 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase SH2639 2644371 - 2645114 + | hypothetical protein SH2640 2646005 - 2645232 - | hypothetical protein SH2641 2646213 - 2646341 + | hypothetical protein TERM 2976 2646427 - 2646413 - g 70 -4.3 -4.7373 | opp_overlap 2646413 GGATGTTACTAAAAA GTTTC TTGAT GAAAC ATTATTCGACAATGT SH2642 2646378 - 2647997 + | hypothetical protein TERM 2977 2648046 - 2648024 - f 74 -9.2 -2.88849 | opp_overlap 2648024, overlap 2648023 TTCATACGATTAAAG GGATAGTTGA TAA TCAGCTATCC TTTTTCCTATATTTT TERM 2978 2648024 - 2648046 + F 100 -11.4 -4.91573 | opp_overlap 2648024 2648023 TTCATACGATTAAAG GGATAGTTGA TAA TCAGCTATCC TTTTTCCTATATTTT SH2643 2648204 - 2648671 + | hypothetical protein SH2644 2648708 - 2649097 + | hypothetical protein TERM 2979 2649095 - 2649135 + T 100 -19.4 -4.25104 | gap 1, opp_overlap 2649095 2649096, overlap 2649096 ATTGTAGAACAAAAA T-GACCTCATAGGATGCAT CAAT ATGCATCCTATGAGGTCTA TTTTAATGAAAAGGA TERM 2980 2649134 - 2649095 - T 100 -21 -5.19328 | opp_overlap 2649095 2649096, overlap 2649096 ATTGTAGAACAAAAA TGACCTCATAGGATGCAT CAAT ATGCATCCTATGAGGTCT ATTTTAATGAAAAGG TERM 2981 2649096 - 2649133 + T 100 -24.5 -3.73042 | opp_overlap 2649095 2649096, overlap 2649095 TTGTAGAACAAAAAT GACCTCATAGGATGCAT CAAT ATGCATCCTATGAGGTC TATTTTAATGAAAAG TERM 2982 2649133 - 2649096 - T 100 -24.5 -3.70512 | opp_overlap 2649096 2649095, overlap 2649095 TTGTAGAACAAAAAT GACCTCATAGGATGCAT CAAT ATGCATCCTATGAGGTC TATTTTAATGAAAAG SH2645 2650965 - 2649160 - | beta-D-glucuronidase SH2646 2651825 - 2650983 - | D-mannonate oxidoreductase TERM 2983 2651446 - 2651470 + g 74 -5.7 -4.69415 | opp_overlap 2651444 2651446, overlap 2651448 ATTACGAAGCCAACA CTTTCTTCATC TAA GTTGAAGAATG TTTGTTTATCTTGAT TERM 2984 2651448 - 2651468 + g 73 -6.9 -3.94393 | opp_overlap 2651446 2651444, overlap 2651446 TACGAAGCCAACACT TTCTTCATC TAA GTTGAAGAA TGTTTGTTTATCTTG uxuA 2652890 - 2651844 - | mannonate dehydratase SH2648 2654306 - 2652903 - | glucuronate isomerase SH2649 2655725 - 2654322 - | hypothetical protein SH2650 2656751 - 2655741 - | hypothetical protein SH2651 2657394 - 2656756 - | hypothetical protein TERM 2985 2657466 - 2657454 - R 71 -7.7 -3.59738 | opp_overlap 2657453 2657454 CATTATATTTGCAAA TGACG AAT CGTCA ATTTAGCGCAGTCAG TERM 2986 2657549 - 2657502 - R 83 -6.6 -4.8622 | gap 1, overlap 2657506 GCTTTCAAGCAAAAA TAAACCCTTCC-TATCAAAATCC TAA AAAGCTTGATATGAAAGGGTTTA TAGCATATTTTCATT SH2652 2659008 - 2657791 - | hypothetical protein SH2653 2659055 - 2659891 + | hypothetical protein TERM 2987 2660208 - 2660161 - g 75 -8 -3.74747 | gap 1, opp_overlap 2660178 2660195, overlap 2660164 2660174 TCAAGCGCTATTAAA CGATTTACAACAACATAGTAAAG TGC CTTTACT-TGTCGCTGCAAACTG TGACTCTGGTGGCAA TERM 2988 2660205 - 2660164 - g 80 -10.5 -2.96873 | gap 1, opp_overlap 2660178 2660195, overlap 2660161 2660174 AGCGCTATTAAACGA TTTACAACAACATAGTAAAG TGC CTTTACT-TGTCGCTGCAAA CTGTGACTCTGGTGG TERM 2989 2660689 - 2660678 - g 76 -4.4 -5.06451 | CATTATTCTAAAAAA CTCA ATCC TGAG TTAGCAGACAAAGAC SH2654 2659910 - 2661634 + | hypothetical protein TERM 2990 2661657 - 2661686 + F 100 -10.9 -4.4891 | opp_overlap 2661660 CTTAAGTTCATATTA TAACGCTAAGGTA CACG TATCTTAGCGTTG TTTTATAATACTGAA TERM 2991 2661683 - 2661660 - f 73 -8.2 -3.47345 | opp_overlap 2661657 AAGTTCATATTATAA CGCTAAGGTA CACG TATCTTAGCG TTGTTTTATAATACT TERM 2992 2661877 - 2661864 - f 71 -3.9 -5.16151 | GAAACTTAACAAAAA TTTTC GGAA GAAAA CAAAAAGAAGCGTTA TERM 2993 2662678 - 2662662 - g 75 -8.1 -3.80877 | opp_overlap 2662665, overlap 2662665 TTACCGCAGAAAACA TAATGGA GTC TCCATTA ACTATAAATATTGAG SH2655 2661998 - 2663071 + | hypothetical protein SH2656 2663058 - 2663645 + | glycine-betaine binding permease protein SH2657 2663652 - 2664773 + | glycine-betaine binding permease protein SH2658 2665668 - 2665102 - | hypothetical protein SH2659 2665772 - 2665710 - | hypothetical protein TERM 2994 2665782 - 2665753 - G 100 -10.1 -4.90296 | AAAACTTTATAAAAA GGCTGAGCAATTA AATT CAATCGCTCAACC TCGTAATCATTACCG SH2660 2667215 - 2665809 - | hypothetical protein SH2661 2668288 - 2667215 - | hypothetical protein TERM 2995 2668446 - 2668402 - R 79 -6.7 -4.65838 | TATATATTTTAAAAA GCAATATTTAGATAAGTTCAT TTA ATATAATAATCTAAATATTGC CTTAACTATACTGAA TERM 2996 2668493 - 2668471 - R 100 -10.6 -5.96894 | ACTGAAATAAAAAAA CGATGAAGTC TAA GACTCCACCG ACAATAAATTTTATT sipB 2669097 - 2668525 - | type-I signal peptidase SipB SH2663 2669450 - 2669857 + | hypothetical protein vraD 2669881 - 2670639 + | ABC transporter ATP-binding protein VraD TERM 2997 2671680 - 2671666 - g 83 -5.8 -5.14626 | ACTATTAAAACAAAA TCATAT TCA ATATGA CACGAAAACATTTGA vraE 2670629 - 2672512 + | ABC transporter permease protein VraE SH2666 2672540 - 2672734 + | hypothetical protein TERM 2998 2672835 - 2672793 - f 75 -8.6 -3.43553 | gap 1, opp_overlap 2672797 ACAAGCAGTAATTAA TTGAGCTGAGAAGGCGCTT TAAATC AAGCGA-TTCTCAGCTCTA ATCATACATACGGGG TERM 2999 2672888 - 2672870 - f 72 -6.1 -4.32857 | GGGCCCAAACATAAA GAATTTC ACAAA GAAATTC TACAAGCTAAGTAAG TERM 3000 2672903 - 2672949 + F 100 -12.5 -5.50723 | gap 1, opp_overlap 2672903 2672904 2672928, overlap 2672907 CTACAAGCTAAGTAA GT-TGGGGGTAGGATAGAATTC AAAA GGATTCTATCCTACCCCTTTGC TTTTTATTTTAATAA TERM 3001 2672947 - 2672904 - f 75 -9.6 -2.64705 | opp_overlap 2672903 2672907, overlap 2672903 2672928 TACAAGCTAAGTAAG TTGGGGGTAGGATAGAATTC AAAA GGATTCTATCCTACCCCTTT GCTTTTTATTTTAAT TERM 3002 2672907 - 2672944 + F 100 -22.3 -4.48685 | opp_overlap 2672904 2672903 2672928, overlap 2672903 AAGCTAAGTAAGTTG GGGGTAGGATAGAATTC AAAA GGATTCTATCCTACCCC TTTGCTTTTTATTTT TERM 3003 2674879 - 2674850 - g 73 -4.3 -4.8622 | CTTCGCAATCAAAAA CAAATGCAGCAGA TGGT TCAGTTACATTTG ATAAGATTTCATTTA TERM 3004 2675248 - 2675232 - g 72 -5.9 -4.45117 | GACAGGTCAAATAAA CTTCAAC TTT ATTGAAG GTAAACGTCCGACTT TERM 3005 2676513 - 2676491 - g 79 -10.6 -2.78211 | overlap 2676490 2676488 ATCCGCCTAAAACAC CGGGTCAACC TCC AGTTAACCCG CCAGGCAACCCACCT SH2667 2673058 - 2676720 + | hypothetical protein TERM 3006 2676732 - 2676761 + T 100 -9.4 -4.93547 | opp_overlap 2676734, overlap 2676734 GTGAAATTTTTAAAA AACCTAAGAAGC ATTTCC GCTTCTTAGGTC TTTTTAATTGATTAC TERM 3007 2676734 - 2676759 + T 100 -12 -4.07912 | opp_overlap 2676734, overlap 2676732 GAAATTTTTAAAAAA CCTAAGAAGC ATTTCC GCTTCTTAGG TCTTTTTAATTGATT TERM 3008 2676759 - 2676734 - T 100 -12.7 -5.07107 | opp_overlap 2676734 2676732 GAAATTTTTAAAAAA CCTAAGAAGCA TTTC CGCTTCTTAGG TCTTTTTAATTGATT SH2668 2677345 - 2676773 - | hypothetical protein TERM 3009 2676858 - 2676876 + g 72 -6 -4.33274 | opp_overlap 2676857 2676873, overlap 2676860 ACAAATGATAAGATG CTCGTAAT GAG ATTACGTG TTTTACTCGTCTGAA TERM 3010 2676860 - 2676874 + g 70 -7.2 -3.76811 | opp_overlap 2676857 2676873, overlap 2676858 AAATGATAAGATGCT CGTAAT GAG ATTACG TGTTTTACTCGTCTG SH2669 2677407 - 2677550 + | hypothetical protein SH2670 2678140 - 2677601 - | hypothetical protein SH2671 2678501 - 2678103 - | hypothetical protein SH2672 2678825 - 2678520 - | hypothetical protein TERM 3011 2678903 - 2678930 + r 74 -8.7 -3.27838 | opp_overlap 2678906, overlap 2678901 ACCCTTCTTCTTTAA TTATTAAACGA TACGTT TCGTTTAATAA TATTGTAAATCTATT TERM 3012 2679039 - 2679006 - R 100 -9.1 -5.80817 | opp_overlap 2679005 TTGAACATAAAAAAA CACTAAGATAATTCA ATTT TTAATCATCTTAGTG CTAATATTTAGTGAT SH2673 2679945 - 2679106 - | hypothetical protein gidB 2680713 - 2679991 - | glucose-inhibited division protein B TERM 3013 2680407 - 2680390 - G 74 -5.7 -4.69664 | TAGATGATTTAAAAA TTGAATA CGTT TATTCAA AGAATCTACAATGGT gidA 2682590 - 2680713 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 2684090 - 2682711 - | tRNA modification GTPase TrmE rnpA 2684588 - 2684244 - | ribonuclease P TERM 3014 2684706 - 2684685 - R 100 -9.5 -6.02546 | opp_overlap 2684685 2684688 TCAAACGAAAAAAAA GACCACTGA GAAG TCAGTGATC TTATGCTGATAAAAC rpmH 2684844 - 2684707 - | 50S ribosomal protein L34 SEQUENCE gi|68535043|ref|NC_007169.1| Staphylococcus haemolyticus JCSC1435 plasmid pSHaeA, complete sequence (length 2300) fosB 122 - 541 + | fosfomycin resistance protein FosB TERM 1 747 - 703 - f 70 -3.1 -5.21709 | gap 2, opp_overlap 703 TTTGACATGAAAAAA CCCCAGTTATATGATTAAGGT GTCGA ATCTAAATCA-A-AACTGGGG GCTTTTTATATGCAT rep 757 - 1761 + | replication protein TERM 2 1756 - 1775 + F 100 -8.6 -5.77632 | opp_overlap 1756 TTGAAAAATTTGAAA CGTTAGCT TAAA AGCTAGCG TTTTTTTATGCTTTT TERM 3 1902 - 1913 + F 70 -3 -5.3658 | TCGCCACTGGTTAAG CAAA AATT TTTG TTTTGTTTTTCTGAT pSHaeA03 1975 - 2082 + | hypothetical protein SEQUENCE gi|68535047|ref|NC_007170.1| Staphylococcus haemolyticus JCSC1435 plasmid pSHaeB, complete sequence (length 2366) ermC 319 - 1053 + | hypothetical protein TERM 1 1088 - 1050 - f 95 -11.9 -3.71924 | opp_overlap 1051, overlap 1054 TAAATTATTTAATAA GTAAGTTAAGGGATGCA TAAAC TGCATCCCTTAACTTGT TTTTCGTGTACCTAT TERM 2 1051 - 1087 + F 100 -17.6 -4.81551 | opp_overlap 1050 1054 AAATTATTTAATAAG TAAGTTAAGGGATGCA TAAAC TGCATCCCTTAACTTG TTTTTCGTGTACCTA TERM 3 1084 - 1054 - f 100 -17.1 -3.54902 | opp_overlap 1051, overlap 1050 TTATTTAATAAGTAA GTTAAGGGATGCA TAAAC TGCATCCCTTAAC TTGTTTTTCGTGTAC TERM 4 1209 - 1184 - f 86 -9.1 -4.10007 | opp_overlap 1187, overlap 1185 1187 ATAAGCGTCGGAAAA GCAGCAAAAAG TTTC CTTTTTGCTGT TGGAGCATGGGGGTT TERM 5 1208 - 1185 - f 100 -12.6 -3.05522 | opp_overlap 1187, overlap 1184 1187 TAAGCGTCGGAAAAG CAGCAAAAAG TTTC CTTTTTGCTG TTGGAGCATGGGGGT TERM 6 1206 - 1187 - f 78 -9.4 -3.08211 | opp_overlap 1187, overlap 1185 1184 AGCGTCGGAAAAGCA GCAAAAAG TTTC CTTTTTGC TGTTGGAGCATGGGG TERM 7 1187 - 1206 + F 78 -9.4 -3.03124 | opp_overlap 1187 1185 1184 AGCGTCGGAAAAGCA GCAAAAAG TTTC CTTTTTGC TGTTGGAGCATGGGG TERM 8 1926 - 1888 - g 95 -9 -5.65496 | overlap 1890 GACCAAAAACAAAAA TACCTCTTACTCGAATTT GGG AACTTTGAGCAAGAGGCA AATGAAAAACAAGAA TERM 9 1924 - 1890 - g 93 -9.4 -4.43511 | overlap 1888 CCAAAAACAAAAATA CCTCTTACTCGAATTT GGG AACTTTGAGCAAGAGG CAAATGAAAAACAAG rep 1501 - 1977 + | replication and maintenance protein SEQUENCE gi|68535050|ref|NC_007171.1| Staphylococcus haemolyticus JCSC1435 plasmid pSHaeC, complete sequence (length 8180) TERM 1 716 - 729 + G 80 -6.7 -4.76123 | opp_overlap 714 AGTAATTACTATACT CGTTC ACAA GAACG TTTTATTAATGATTT rep 542 - 1408 + | replication protein Rep TERM 2 1478 - 1517 + T 78 -4.4 -5.43621 | opp_overlap 1482, overlap 1482 ACATCATTAGATGTG AAAACCCCAGCATG CCGACCAAAGCA TATGCTGGGGTTTC TTTTTTATCGTTTAT TERM 3 1482 - 1513 + T 77 -5.2 -5.1471 | opp_overlap 1482, overlap 1478 CATTAGATGTGAAAA CCCCAGCATG CCGACCAAAGCA TATGCTGGGG TTTCTTTTTTATCGT pSHaeC02 1614 - 1522 - | hypothetical protein pSHaeC03 1690 - 1529 - | hypothetical protein TERM 4 1755 - 1705 - R 100 -24.6 -5.02074 | opp_overlap 1705 TGAGCCTTCAAAAAA GTATTCAAAGTGTGCAAAGTAT ACATTCG ATACTTTGCACACTTTGAATAC TTTGTATACACATGT TERM 5 1705 - 1755 + r 100 -24.6 -4.04474 | opp_overlap 1705 TGAGCCTTCAAAAAA GTATTCAAAGTGTGCAAAGTAT ACATTCG ATACTTTGCACACTTTGAATAC TTTGTATACACATGT TERM 6 1865 - 1908 + r 100 -16.3 -3.92178 | opp_overlap 1865 1871, overlap 1871 AAACGATAATGATAA GTAAAAGGCTTAAACGCTG TTAAAT CAACGTTTAAGCCTTTTGC TTTAGTTAACATAAT TERM 7 1908 - 1865 - R 100 -16.3 -3.59456 | opp_overlap 1865 1871, overlap 1871 AAACGATAATGATAA GTAAAAGGCTTAAACGCTG TTAAAT CAACGTTTAAGCCTTTTGC TTTAGTTAACATAAT TERM 8 1902 - 1871 - R 100 -13.9 -4.52781 | opp_overlap 1865 1871, overlap 1865 TAATGATAAGTAAAA GGCTTAAACGCTG TTAAAT CAACGTTTAAGCC TTTTGCTTTAGTTAA TERM 9 1871 - 1902 + r 100 -11.7 -4.62054 | opp_overlap 1871 1865, overlap 1865 TAATGATAAGTAAAA GGCTTAAACGCTG TTAAAT CAACGTTTAAGCC TTTTGCTTTAGTTAA pSHaeC04 3158 - 1986 - | hypothetical protein TERM 10 2830 - 2816 - G 75 -8.6 -3.48063 | GAGTTAAAGTTACAA GTGGAA TGA TTCCAC AACCAATAGCTTGAA pSHaeC05 3618 - 3151 - | hypothetical protein pSHaeC06 3775 - 4479 + | hypothetical protein pSHaeC07 4463 - 5662 + | hypothetical protein TERM 11 5699 - 5721 + F 95 -9.2 -5.14563 | opp_overlap 5701, overlap 5701 GAATATTTTGAATTT AAGTGGCTAA CAA TTAGCCACTA TTTTTTCGTCAGAAA TERM 12 5719 - 5701 - f 95 -11.8 -3.17901 | opp_overlap 5699 5701 ATATTTTGAATTTAA GTGGCTAA CAA TTAGCCAC TATTTTTTCGTCAGA TERM 13 5701 - 5719 + F 100 -11.8 -4.20707 | opp_overlap 5701, overlap 5699 ATATTTTGAATTTAA GTGGCTAA CAA TTAGCCAC TATTTTTTCGTCAGA TERM 14 5806 - 5774 - f 74 -9.2 -2.93549 | gap 1, opp_overlap 5792, overlap 5771 TATCCCCAACAAGCA GGCGTCGCTA-CCAC GTGA GTGGCTAGCAAAGCC AATGCTTGCCAAACC TERM 15 5826 - 5879 + F 100 -13.9 -3.34398 | gap 1, opp_overlap 5841, overlap 5841 CTTGCCAAACCACTT TATTACTTGATG-AAATTTAGATTAT CAT ATAATCTAAATTTATATTAAGTAATA TCTTTCGAAGAAAGC TERM 16 5863 - 5841 - f 86 -9.4 -3.75169 | opp_overlap 5826 5841 TATTACTTGATGAAA TTTAGATTAT CAT ATAATCTAAA TTTATATTAAGTAAT TERM 17 5841 - 5863 + F 88 -9.4 -4.22009 | opp_overlap 5841, overlap 5826 TATTACTTGATGAAA TTTAGATTAT CAT ATAATCTAAA TTTATATTAAGTAAT pSHaeC08 5908 - 6291 + | mobilization protein pSHaeC09 6273 - 6473 + | mobilization protein pSHaeC10 6460 - 7467 + | mobilization protein TERM 18 7686 - 7674 - g 86 -4.8 -5.67967 | ATGATTATAAAAAAA CGCT TGATG AGCG TATCGAAACAAACGA pSHaeC11 7169 - 7975 + | mobilization protein