TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.637647 %AT, 1816287 nt, 11529 terms. Intergenic: 0.674603 %AT, H2T: 269041 nt, 2237 terms; T2T: 48938 nt, 1280 terms; H2H: 51527 nt, 923 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|22536185|ref|NC_004116.1| Streptococcus agalactiae 2603V/R, complete genome (length 2160267) dnaA 102 - 1463 + | chromosomal replication initiation protein TERM 1 2517 - 2505 - g 73 -6.3 -4.39571 | TTTAGAAATTCAAAA TGAGA CAG TCTCA GCTCATGTAAACTCT dnaN 1618 - 2754 + | DNA polymerase III subunit beta TERM 2 2756 - 2794 + F 100 -20.7 -3.35438 | opp_overlap 2756 2759 2764, overlap 2759 2764 TTCGTACTAACTAAA TAAGAAAACTACCCAAG TTATT CTTGGGTAGTTTTCTTA TTCTAAGATATGCTA TERM 3 2794 - 2756 - f 100 -20.7 -3.95584 | opp_overlap 2756 2759 2764, overlap 2759 2764 TTCGTACTAACTAAA TAAGAAAACTACCCAAG TTATT CTTGGGTAGTTTTCTTA TTCTAAGATATGCTA TERM 4 2791 - 2759 - f 100 -18 -4.10437 | opp_overlap 2756 2759 2764, overlap 2756 2764 GTACTAACTAAATAA GAAAACTACCCAAG TTATT CTTGGGTAGTTTTC TTATTCTAAGATATG TERM 5 2759 - 2791 + F 100 -18 -3.81447 | opp_overlap 2759 2756 2764, overlap 2756 2764 GTACTAACTAAATAA GAAAACTACCCAAG TTATT CTTGGGTAGTTTTC TTATTCTAAGATATG TERM 6 2786 - 2764 - f 100 -12.1 -5.03961 | opp_overlap 2759 2756 2764, overlap 2759 2756 AACTAAATAAGAAAA CTACCCAAG TTATT CTTGGGTAG TTTTCTTATTCTAAG TERM 7 2764 - 2786 + F 100 -12.1 -4.95547 | opp_overlap 2764 2759 2756, overlap 2759 2756 AACTAAATAAGAAAA CTACCCAAG TTATT CTTGGGTAG TTTTCTTATTCTAAG TERM 8 3283 - 3273 - g 85 -2.6 -5.79595 | CTCTAAAATAAAAAA TATT TTG AATA GATATCGTCTAGGAA SAG0003 2824 - 3705 + | diacylglycerol kinase catalytic subunit SAG0004 3715 - 3912 + | hypothetical protein SAG0005 4114 - 4317 + | hypothetical protein TERM 9 4498 - 4526 + G 70 -5.3 -4.41616 | opp_overlap 4513 TTAACAGCAGGTATT GTAGGCTTACCAA ATG TTGGTAAATCAAC TTTATTTAACGCAAT ychF 4477 - 5592 + | translation-associated GTPase TERM 10 5620 - 5650 + F 100 -12.8 -4.88222 | opp_overlap 5630, overlap 5621 GATTTGTTAACTTTT AGGTTAAGGATATT GTT AATATCCTTAACCA TTTTTGCGTTTTAAT TERM 11 5621 - 5649 + F 100 -16.3 -3.51307 | opp_overlap 5630, overlap 5620 ATTTGTTAACTTTTA GGTTAAGGATATT GTT AATATCCTTAACC ATTTTTGCGTTTTAA pth 5676 - 6251 + | peptidyl-tRNA hydrolase mfd 6248 - 9745 + | transcription-repair coupling factor TERM 12 9919 - 9935 + G 100 -10.9 -5.14645 | opp_overlap 9919 9915 ATTTGAGAGAATTAA GAGAGCT ATT AGCTCTC TTTTTGTTACATTAT TERM 13 9935 - 9919 - g 84 -10.9 -3.49886 | opp_overlap 9919, overlap 9915 ATTTGAGAGAATTAA GAGAGCT ATT AGCTCTC TTTTTGTTACATTAT SAG0009 9906 - 10001 + | hypothetical protein SAG0010 10036 - 10308 + | S4 domain-containing protein SAG0011 10295 - 10666 + | hypothetical protein SAG0012 10669 - 10803 + | hypothetical protein TERM 14 11563 - 11550 - g 76 -6.7 -4.42667 | GTAAAATTAGGAAAA CTGTC ATTG GACAG CAAATTTGAATACAA SAG0013 10803 - 12089 + | hypothetical protein TERM 15 13001 - 12986 - g 78 -5.4 -4.95155 | opp_overlap 12986 TTCATATTACAAAAA TCCATC CTAA GACGGA TAGTTTTAAGGTTGA SAG0014 12091 - 13365 + | MesJ/Ycf62 family protein hpt 13370 - 13912 + | hypoxanthine-guanine phosphoribosyltransferase TERM 16 14424 - 14441 + G 72 -7.7 -3.73775 | GGCGGTGGCGGTGGC GCTCGTG GTGC CATGAGC TTTGGTAAAAATAAA TERM 17 14552 - 14538 - g 73 -8.6 -3.35762 | overlap 14532 AAGCAAGAATTAATA GAAGTC GTT GACTTC CTTAAAGATCCTAAA TERM 18 14967 - 14977 + G 73 -6.8 -4.25283 | GATCCCGCATTACTG CGTC CAG GACG TTTTGATAGAAAAGT ftsH 13935 - 15911 + | cell division protein FtsH TERM 19 15989 - 15943 - f 77 -8.3 -3.95653 | opp_overlap 15950, overlap 15950 AAAGAACTTTATAAA TTTCAAATACCCTTCAAATTT AGATA AAATTTGAAGGGTATTTTTTA TGAAGATGAAGTTTA TERM 20 15982 - 15950 - f 100 -15.2 -3.74347 | opp_overlap 15950, overlap 15943 TTTATAAATTTCAAA TACCCTTCAAATTT AGATA AAATTTGAAGGGTA TTTTTTATGAAGATG TERM 21 15950 - 15982 + F 100 -15.2 -5.252 | opp_overlap 15950 15943 TTTATAAATTTCAAA TACCCTTCAAATTT AGATA AAATTTGAAGGGTA TTTTTTATGAAGATG TERM 22 16384 - 16368 - f 83 -6.6 -4.89605 | CAAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 23 16398 - 16388 - f 79 -6.8 -4.61868 | overlap 16390 16395 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 24 17419 - 17432 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 25 18521 - 18502 - f 95 -12.2 -3.62096 | opp_overlap 18501 18500 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 26 21803 - 21783 - f 71 -8.3 -3.31263 | opp_overlap 21798, overlap 21785 AGTTCAGTGGTAGAA CATCACCTT GCC AAGGTGAGG GTCGCGGGTTCGAAC TERM 27 21801 - 21785 - f 78 -9.5 -3.22475 | opp_overlap 21798, overlap 21783 TTCAGTGGTAGAACA TCACCTT GCC AAGGTGA GGGTCGCGGGTTCGA TERM 28 22215 - 22199 - f 83 -6.6 -4.86216 | ACAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 29 22229 - 22219 - f 79 -6.8 -4.61868 | overlap 22221 22226 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 30 23250 - 23263 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 31 24352 - 24333 - f 95 -12.2 -3.62096 | opp_overlap 24332 24331 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 32 27634 - 27614 - f 71 -8.3 -3.31263 | opp_overlap 27629, overlap 27616 AGTTCAGTGGTAGAA CATCACCTT GCC AAGGTGAGG GTCGCGGGTTCGAAC TERM 33 27632 - 27616 - f 78 -9.5 -3.22475 | opp_overlap 27629, overlap 27614 TTCAGTGGTAGAACA TCACCTT GCC AAGGTGA GGGTCGCGGGTTCGA TERM 34 28493 - 28478 - f 93 -9 -4.75518 | opp_overlap 28489 TACATAAAAGTAAAA CCAAGC ATTT GCTTGG GCGCGTAGCTCAGGT TERM 35 28685 - 28698 + F 95 -5.3 -6.04953 | ATATTATAATTTTAA GAGTA ATTA TACTC TTTTTTTATTTCTCT pscB 28902 - 30245 + | PcsB protein TERM 36 30237 - 30294 + F 71 -8 -3.18088 | opp_overlap 30256, overlap 30256 GTTTACTATATTTAC CCAAATTAATGAATACTAAGGAGATC TTTCGT GGTCTCCTTTTTGTTTATTAATTAGG TATGGTTTATTTTGG TERM 37 30256 - 30275 + F 86 -5.7 -5.48514 | opp_overlap 30256, overlap 30237 ATTAATGAATACTAA GGAGATC TTTCGT GGTCTCC TTTTTGTTTATTAAT TERM 38 30812 - 30822 + G 74 -8.2 -3.65581 | CGTTGATCACCTTAT GGGG GCT CCCC TTATTGCAGATTACT prsA-1 30369 - 31337 + | ribose-phosphate pyrophosphokinase TERM 39 31374 - 31330 - f 100 -16.9 -3.23094 | opp_overlap 31335 31345, overlap 31335 31345 TTGAAATGAATAAAC TAAAATGACAAAAAACCTGTT ATT AACAGGTTTTTTATCATTTAA TGACGGAAAACTGGA TERM 40 31335 - 31369 + F 100 -14.6 -3.72576 | opp_overlap 31330 31335 31345, overlap 31345 ATGAATAAACTAAAA TGACAAAAAACCTGTT ATT AACAGGTTTTTTATCA TTTAATGACGGAAAA TERM 41 31369 - 31335 - f 100 -16.8 -4.68846 | opp_overlap 31335 31345, overlap 31330 31345 ATGAATAAACTAAAA TGACAAAAAACCTGTT ATT AACAGGTTTTTTATCA TTTAATGACGGAAAA TERM 42 31359 - 31345 - f 100 -8.6 -5.4588 | opp_overlap 31345 31335, overlap 31335 31330 TAAAATGACAAAAAA CCTGTT ATT AACAGG TTTTTTATCATTTAA TERM 43 31345 - 31359 + F 100 -8.6 -5.42265 | opp_overlap 31335 31330 31345, overlap 31335 TAAAATGACAAAAAA CCTGTT ATT AACAGG TTTTTTATCATTTAA SAG0019 31445 - 32620 + | aromatic amino acid aminotransferase TERM 44 33080 - 33091 + G 71 -4.4 -4.77757 | overlap 33074 TGTTTTTTGTCATAG GGTA GGAT TACC TTTTGATTTTTCACA recO 32610 - 33371 + | DNA repair protein RecO TERM 45 33407 - 33382 - f 78 -9.1 -3.38581 | opp_overlap 33383, overlap 33380 33383 33386 ATTAAGTTGTAAAGA GGAACATGACA TTAG TGTCATGTTCT TTTTTTTAATATTAG TERM 46 33383 - 33406 + F 100 -12.6 -5.94597 | opp_overlap 33383 33382 33380 33386 TTAAGTTGTAAAGAG GAACATGACA TTAG TGTCATGTTC TTTTTTTTAATATTA TERM 47 33406 - 33383 - f 89 -12.6 -2.62667 | opp_overlap 33383, overlap 33382 33380 33386 TTAAGTTGTAAAGAG GAACATGACA TTAG TGTCATGTTC TTTTTTTTAATATTA TERM 48 33403 - 33386 - f 76 -8.5 -3.45839 | opp_overlap 33383, overlap 33383 33382 33380 AGTTGTAAAGAGGAA CATGACA TTAG TGTCATG TTCTTTTTTTTAATA SAG0021 33461 - 34312 + | protease, putative plsX 34390 - 35382 + | putative glycerol-3-phosphate acyltransferase PlsX acpP-1 35393 - 35632 + | acyl carrier protein TERM 49 35643 - 35665 + F 81 -2.1 -6.07969 | opp_overlap 35643 AGTAATAATAAAAAG GAAGAAA ATACGAACG TTTCTTC TTTTTTTTGATTTTA TERM 50 35739 - 35725 - f 72 -7.2 -3.78934 | TGTGTGTTAGAATAA CTCTTA AAA TAAGAG AAAGGCGAATAATCA purC 35756 - 36460 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 51 37155 - 37171 + G 71 -8.7 -3.13899 | overlap 37158 GCAGGGATTGGCTAT GGAGGTC GAT GACCTTC TCTTCATCCAAGATT TERM 52 38355 - 38335 - g 71 -4.7 -4.67755 | ACAGTTACTGAAAAA CCAAATCTT GTC ATGACTTGG AATGGTGAAACAATT SAG0025 36583 - 40308 + | phosphoribosylformylglycinamidine synthase, putative TERM 53 40485 - 40511 + F 84 -10.9 -3.06831 | TGTCCTAGCTTTAGC CCTCGCCTTGA ATTAG TGAAGGCGAGG TTAGATAGAAATTCG purF 40720 - 42174 + | amidophosphoribosyltransferase purM 42202 - 43224 + | phosphoribosylaminoimidazole synthetase TERM 54 43277 - 43249 - f 74 -9 -3.15008 | overlap 43247 TTTTATAAGAAAGGA GTGTTTAGTTAG TTTGC CTAACTGAACAC GGGATTAAATTTCTA purN 43392 - 43940 + | phosphoribosylglycinamide formyltransferase SAG0029 43963 - 44715 + | acetyltransferase TERM 55 46249 - 46235 - g 76 -6.4 -4.42062 | opp_overlap 46234, overlap 46231 GACGCCGCAAACAAA CATGGC TTG ACCATG ATCTTCACAGGCGTG purH 44735 - 46282 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 56 46366 - 46385 + F 100 -7.2 -5.69023 | opp_overlap 46369 TATTAAACCTCCTAA GTACTCAT CAAG GTGAGTAC TTTTTTTGATATTTT SAG0031 46475 - 47374 + | M24/M37 family peptidase TERM 57 47875 - 47852 - g 79 -7.4 -4.50859 | opp_overlap 47866, overlap 47854 47865 47866 CAATGAAAATAGAAA CACCAGCAAC AAAT GCTGCTGGTC AAACAACAGCTACTG TERM 58 47873 - 47854 - g 85 -10 -3.83559 | opp_overlap 47866, overlap 47852 47865 47866 ATGAAAATAGAAACA CCAGCAAC AAAT GCTGCTGG TCAAACAACAGCTAC TERM 59 48313 - 48299 - g 86 -10 -4.13654 | CTCCTAAAGTAGAAA CTGGTG CAT CACCAG AGCATGTATCAGCTC TERM 60 48471 - 48459 - g 82 -7.7 -4.45068 | overlap 48443 AGCTTCAACAACAAA TGCAG TAG CTGCA CATCCTGAAAATGCA SAG0032 47521 - 48825 + | group B streptococcal surface immunogenic protein TERM 61 48860 - 48826 - f 74 -6.8 -4.22554 | gap 1, opp_overlap 48826 48836 TCATTTAACAAATAA TATAAAAAAGGAAGC TATTTG GCTTC-TTTTTTATA TGCCTTGAATAGACT TERM 62 48836 - 48851 + F 84 -5.4 -5.38951 | opp_overlap 48826, overlap 48826 AATAATATAAAAAAG GAAGCT ATTT GGCTTC TTTTTTATATGCCTT TERM 63 49524 - 49512 - g 78 -6.3 -4.8143 | opp_overlap 49514 TGAAGAAGGCAAAAA TGCTT TTG AAGCA GGAGTTGATTTTGTG SAG0033 49072 - 49770 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 64 50111 - 50123 + G 74 -4.8 -4.72272 | opp_overlap 50102 ATTGAAGCAGGGACA GCAC CTGAT GTGC TTTTTGATGCACCAG TERM 65 51034 - 51015 - g 75 -8.6 -3.54543 | opp_overlap 51014 ATGGATTTTCTGAAA TGAGAACC TTAT GGTTCCCA ATGGTTCAATCTGTA SAG0034 49817 - 51133 + | sugar ABC transporter, sugar-binding protein TERM 66 51143 - 51184 + F 74 -5.4 -4.74801 | gap 1, opp_overlap 51135 AAATAATTAAGGAGA CTCCTTTTCTATGGTCAAT CACAT ATTGGG-ATAGAAGAGGAG TTTTTAGTCAAGTTA SAG0035 51221 - 52108 + | sugar ABC transporter, permease protein SAG0036 52118 - 52948 + | sugar ABC transporter, permease protein TERM 67 53273 - 53283 + G 73 -5.4 -4.54727 | overlap 53270 TTTATCAAGTGCTCA GAAG AGA CTTC TTTTGATTTGAGAGA SAG0037 52961 - 53404 + | hypothetical protein SAG0038 53424 - 54086 + | hypothetical protein SAG0039 54083 - 55000 + | N-acetylneuraminate lyase, putative SAG0040 55017 - 55898 + | ROK family protein SAG0041 55906 - 56883 + | acetyl xylan esterase, putative TERM 68 56871 - 56903 + T 83 -10.8 -2.79968 | opp_overlap 56860 56876, overlap 56876 TCAATTTACAAAGCA AAAAATCGAGTAGA TTATT TCTACTCGATTTTC ATTTAGCGTTGAATA TERM 69 56876 - 56898 + T 95 -10.7 -4.564 | opp_overlap 56876, overlap 56871 TTACAAAGCAAAAAA TCGAGTAGA TTATT TCTACTCGA TTTTCATTTAGCGTT TERM 70 56898 - 56876 - T 100 -10.7 -5.42514 | opp_overlap 56876 56871 TTACAAAGCAAAAAA TCGAGTAGA TTATT TCTACTCGA TTTTCATTTAGCGTT SAG0042 57709 - 56906 - | RpiR family phosphosugar-binding transcriptional regulator purD 57991 - 59256 + | phosphoribosylamine--glycine ligase TERM 71 59302 - 59288 - f 93 -11.4 -3.73953 | ATTAGCGTCAGCAAA GCGACC GAA GGTCGC TCCAAAAAGAAAGAA purE 59537 - 60025 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 60012 - 61103 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 72 61522 - 61511 - g 70 -3 -5.13521 | overlap 61502 61500 AAAGTATTGAAAAAA GAAA GTTT TTTC AATGAAGTTGTTATT SAG0046 61157 - 62548 + | hypothetical protein TERM 73 63240 - 63263 + G 76 -10.4 -2.6914 | opp_overlap 63239, overlap 63239 TCCACGCAGAATATT TTGCAGTGCT TGCA AGCATTGCAA CTTCTATCGAACGTA purB 62573 - 63871 + | adenylosuccinate lyase TERM 74 63920 - 63872 - f 100 -16.5 -4.56153 | opp_overlap 63877, overlap 63877 GGATTAGAAAAATAA GAAAATTCCATTACTGGTTAA CGTTTTT TTAACCAGTAATGGAATTTTT ATTGATTTAAAAGGA TERM 75 63877 - 63915 + F 100 -16.4 -5.24551 | opp_overlap 63877 63872 AGAAAAATAAGAAAA TTCCATTACTGGTTAA CGTTTTT TTAACCAGTAATGGAA TTTTTATTGATTTAA TERM 76 63915 - 63877 - f 100 -16.4 -5.18715 | opp_overlap 63877, overlap 63872 AGAAAAATAAGAAAA TTCCATTACTGGTTAA CGTTTTT TTAACCAGTAATGGAA TTTTTATTGATTTAA TERM 77 64882 - 64835 - g 90 -8.6 -4.39002 | opp_overlap 64835 64872 AAAGTCTGCAGAAAA TGCTTACCAACAATCAATTATG TTTT CAAAAATGATTGATGACAAGCA TCTAATTAAAAAATT SAG0048 64023 - 64934 + | Cro/CI family transcriptional regulator TERM 78 64941 - 64924 - f 87 -9.9 -3.76835 | GGCAAGAAGATATAA CAGGACA TTGA TGTCCTG TGACTCTGAGGTCTA ruvB 65231 - 66229 + | Holliday junction DNA helicase B TERM 79 66243 - 66267 + F 100 -10.9 -5.48054 | AAAACATAAGTCATT TTAAGGCTAGA GTA TCTAGTCTTAA TTTTTTAATTTTCAT SAG0050 66381 - 66818 + | phosphotyrosine protein phosphatase, low molecular weight SAG0051 66825 - 67205 + | MORN motif-containing protein TERM 80 67711 - 67721 + G 73 -5.4 -4.62336 | GACTTTGTTCCTTAT TTCC ATG GGAA TTTTTGGAGTCAGCT SAG0052 67202 - 68980 + | hypothetical protein TERM 81 68973 - 68957 - f 76 -6.5 -4.69027 | overlap 68958 AAAGCTATTCAAAAA TCAGCTC AAC GAGCTGC AAAATAAACAAGTCC TERM 82 68972 - 68958 - f 84 -10 -3.40331 | overlap 68957 AAGCTATTCAAAAAT CAGCTC AAC GAGCTG CAAAATAAACAAGTC TERM 83 68986 - 69004 + F 83 -4.5 -5.60993 | opp_overlap 68985 68986 68982 68987, overlap 68987 TGCAAAATAAACAAG TCCGAGT CATGT ACTCGGC TTTTTTTGTGAAAAC TERM 84 68987 - 69003 + F 77 -8 -3.95873 | opp_overlap 68985 68986 68982 68987, overlap 68986 GCAAAATAAACAAGT CCGAGT CATGT ACTCGG CTTTTTTTGTGAAAA TERM 85 69167 - 69147 - f 75 -2.6 -5.54264 | opp_overlap 69147 69147 69160, overlap 69148 AAAGATTGAAAAAAA GTTCACAA AAAAG TTGTGAAA CTATTTACAAAGTTT TERM 86 69913 - 69929 + G 78 -8.7 -3.66288 | GCCCTTGGTGTAGGT GCTGGGA ATG TTCCAGC TTATGTTGAAAAATC adhE 69250 - 71892 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 87 71900 - 71933 + F 80 -9.7 -3.54459 | opp_overlap 71907, overlap 71907 GTAAGTAACAGCAGT CGAAGAATCTCACTC TATT GAGTGGGATTTTTAG TTTCAAAAAGATTAA TERM 88 71907 - 71926 + F 95 -8.6 -4.98531 | opp_overlap 71907, overlap 71900 ACAGCAGTCGAAGAA TCTCACTC TATT GAGTGGGA TTTTTAGTTTCAAAA adhP 72071 - 73087 + | alcohol dehydrogenase TERM 89 73126 - 73103 - f 100 -14 -3.17688 | opp_overlap 73103, overlap 73091 TAATGATGTTACGAA CCCCCTTTAT TTTA ATAAAGGGGG TTAATTATATAACGA TERM 90 73103 - 73126 + F 100 -14 -3.49618 | opp_overlap 73103 73091 TAATGATGTTACGAA CCCCCTTTAT TTTA ATAAAGGGGG TTAATTATATAACGA TERM 91 74402 - 74419 + G 71 -7 -3.90328 | opp_overlap 74404 TAGAGGATCCGCATA CAGCTG TAGCAT CAGCTG TTTATCAAGCTTATC thrC 73207 - 74697 + | threonine synthase SAG0056 74844 - 76082 + | MATE efflux family protein TERM 92 76097 - 76078 - f 79 -5 -5.14477 | opp_overlap 76078 GATATATTCAAAAAA TGTAACCA GAAA TGGTTGCA TTTTTTTCGAAAATA TERM 93 76078 - 76097 + F 100 -7.2 -5.41143 | opp_overlap 76078 GATATATTCAAAAAA TGTAACCA GAAA TGGTTGCA TTTTTTTCGAAAATA rpsJ 76288 - 76596 + | 30S ribosomal protein S10 rplC 76701 - 77327 + | 50S ribosomal protein L3 rplD 77351 - 77974 + | 50S ribosomal protein L4 rplW 77974 - 78270 + | 50S ribosomal protein L23 rplB 78288 - 79121 + | 50S ribosomal protein L2 TERM 94 79325 - 79307 - g 83 -2.4 -5.83211 | GACGAAAAGAAAAAA GTAATCAA AAC TTGGTCAC GTCGTTCAACGATTT rpsS 79220 - 79498 + | 30S ribosomal protein S19 TERM 95 79556 - 79578 + G 83 -9.2 -3.86106 | overlap 79547 ATGGCTCGTACAGTG CGTGTTTCAC CTC GTAAAACACG TTTAGTACTTGATCT rplV 79514 - 79858 + | 50S ribosomal protein L22 rpsC 79871 - 80524 + | 30S ribosomal protein S3 rplP 80528 - 80941 + | 50S ribosomal protein L16 rpmC 80951 - 81157 + | 50S ribosomal protein L29 rpsQ 81183 - 81443 + | 30S ribosomal protein S17 rplN 81468 - 81836 + | 50S ribosomal protein L14 TERM 96 81859 - 81876 + F 86 -11.3 -2.64274 | opp_overlap 81856 81852, overlap 81856 81856 TTAACAAACGTAGTC CCCTAGG ATTT CCTAGGG TGCCTTTCGAGGCGT rplX 81916 - 82221 + | 50S ribosomal protein L24 TERM 97 82217 - 82201 - f 74 -2.2 -5.55769 | opp_overlap 82201 CGTTACAACAAAAAA TCAGGC GAAGT GCTTGA TTAATCACGAAGGAA rplE 82245 - 82787 + | 50S ribosomal protein L5 rpsN 82805 - 82990 + | 30S ribosomal protein S14 rpsH 83145 - 83543 + | 30S ribosomal protein S8 rplF 83653 - 84189 + | 50S ribosomal protein L6 rplR 84290 - 84646 + | 50S ribosomal protein L18 rpsE 84665 - 85159 + | 30S ribosomal protein S5 rpmD 85174 - 85353 + | 50S ribosomal protein L30 TERM 98 85366 - 85389 + F 73 -8.2 -3.54741 | opp_overlap 85366 85359 TAATTAAATGCTAAA TCGCACTGAT TGTT ATTGGTGCGA TTTAAACAAATCGTA rplO 85478 - 85918 + | 50S ribosomal protein L15 secY 85939 - 87243 + | preprotein translocase subunit SecY TERM 99 87241 - 87276 + F 74 -4.2 -5.1675 | gap 1, opp_overlap 87246 87248 87250, overlap 87246 87247 87250 ATGAATACAACAGAA TAGAATATA-GGTTGAC TCT GTCAACCTTCTATTTTG TTTTTTAATAAGTCC TERM 100 87246 - 87271 + F 77 -4.1 -5.45813 | gap 1, opp_overlap 87246 87248 87250, overlap 87241 87247 87250 TACAACAGAATAGAA TATA-GGTTGAC TCT GTCAACCTTCTA TTTTGTTTTTTAATA TERM 101 87268 - 87248 - f 73 -8.3 -3.49582 | opp_overlap 87247 87246 87241 87250, overlap 87246 87250 CAACAGAATAGAATA TAGGTTGAC TCT GTCAACCTT CTATTTTGTTTTTTA TERM 102 87250 - 87266 + F 100 -10.9 -4.1922 | opp_overlap 87250 87248 87246, overlap 87247 87246 87241 ACAGAATAGAATATA GGTTGAC TCT GTCAACC TTCTATTTTGTTTTT TERM 103 87266 - 87250 - f 85 -10.9 -3.30171 | opp_overlap 87247 87246 87241 87250, overlap 87248 87246 ACAGAATAGAATATA GGTTGAC TCT GTCAACC TTCTATTTTGTTTTT TERM 104 87289 - 87307 + F 72 -6 -4.41348 | opp_overlap 87289, overlap 87285 TTGTTTTTTAATAAG TCCGACAT GCT GTGTTGGA TTTATTTAAAAACAA adk 87338 - 87976 + | adenylate kinase TERM 105 88010 - 87981 - f 78 -9.5 -3.20126 | opp_overlap 87980 87987 88005, overlap 87974 87978 87979 88005 AACTCAAATAAATTA TGCTAATCTACTT GCAT AAGTAGATTAGTA ATGATATACTAAGTT infA 88092 - 88310 + | translation initiation factor IF-1 rpmJ 88336 - 88452 + | 50S ribosomal protein L36 rpsM 88470 - 88835 + | 30S ribosomal protein S13 rpsK 88853 - 89236 + | 30S ribosomal protein S11 TERM 106 89758 - 89748 - g 84 -3.2 -5.72053 | opp_overlap 89755 GAAGGAAATAAAAAA GATG ATG CACC AGTGGGAACATTGGC rpoA 89286 - 90224 + | DNA-directed RNA polymerase subunit alpha rplQ 90239 - 90625 + | 50S ribosomal protein L17 TERM 107 90795 - 90746 - f 100 -13.1 -3.24021 | opp_overlap 90746 90749 90793 TTGTTAAATAGGTAA CGCTTGTTTACGAAATGCAAACA ATTT TGTTTATATTTCGTAAGCAGGCG TTTTATGCATTATTA TERM 108 90746 - 90795 + F 100 -17.5 -4.50943 | opp_overlap 90746, overlap 90749 90793 TTGTTAAATAGGTAA CGCTTGTTTACGAAATGCAAACA ATTT TGTTTATATTTCGTAAGCAGGCG TTTTATGCATTATTA TERM 109 90749 - 90769 + F 72 -3.3 -5.13648 | opp_overlap 90746, overlap 90746 TTAAATAGGTAACGC TTGTTTACG AAA TGCAAACAA TTTTGTTTATATTTC TERM 110 91192 - 91176 - f 83 -6.6 -4.86216 | ACAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 111 91206 - 91196 - f 79 -6.8 -4.61868 | overlap 91198 91203 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 112 92227 - 92240 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 113 93329 - 93310 - f 95 -12.2 -3.62096 | opp_overlap 93309 93308 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 114 97396 - 97406 + F 71 -8.2 -3.3353 | overlap 97377 CGTGCCGGTTCGACC CCGG CCG CCGG TATATTTATAAAGAC TERM 115 97419 - 97440 + F 100 -9.5 -5.5208 | opp_overlap 97419 CGGTATATTTATAAA GACAAGGTT TAGA AGCCTTGTC TTTTTTGTATTGTGC TERM 116 97440 - 97419 - f 72 -7.3 -3.95073 | opp_overlap 97419 CGGTATATTTATAAA GACAAGGTT TAGA AGCCTTGTC TTTTTTGTATTGTGC SAG0086 97819 - 98076 + | putative lipoprotein SAG0087 98067 - 98246 + | hypothetical protein SAG0088 98316 - 98486 + | hypothetical protein SAG0089 99401 - 99952 + | hypothetical protein SAG0090 100172 - 100591 + | hypothetical protein TERM 117 100601 - 100642 + F 100 -19.2 -3.11812 | opp_overlap 100611, overlap 100611 CATTGATTGTGTCAT CATATAAAAAGCTTGAGA GTGTCA TCTCAAGCTTTTTATATG TTAACTAATATGAGT TERM 118 100632 - 100611 - f 95 -8.8 -5.00895 | opp_overlap 100601 100611 GTCATCATATAAAAA GCTTGAGA GTGTCA TCTCAAGC TTTTTATATGTTAAC TERM 119 100611 - 100632 + F 95 -8.8 -5.10064 | opp_overlap 100611, overlap 100601 GTCATCATATAAAAA GCTTGAGA GTGTCA TCTCAAGC TTTTTATATGTTAAC SAG0091 100836 - 101270 + | transcriptional regulator ComX1, putative TERM 120 101281 - 101303 + F 100 -8.5 -5.60993 | ATTAATCGATTTTAT TTCTGCAGT AGATA GCTGCAGAA TTTTTTTATAGGGAA TERM 121 101465 - 101477 + G 72 -7.7 -3.76411 | GTCGCGCTCAGGGGT GGAGT GAT ACTCC TTTAACTACTTTTGG SAG0092 101392 - 102084 + | phosphoglycerate mutase family protein SAG0093 102081 - 102833 + | D-alanyl-D-alanine carboxypeptidase family protein TERM 122 102997 - 102981 - g 73 -2.2 -5.38951 | AATTTATACAAAAAA TTGTGC CAGAT GCGCAA GATCTAGGAAAGTCG SAG0094 102830 - 103405 + | N-acetylmuramoyl-L-alanine amidase TERM 123 103436 - 103406 - f 77 -9.9 -2.62788 | opp_overlap 103408, overlap 103403 103411 AGATATGATAAGTGA TATTAGCACTCTT TGAAT AAGAGTGCTAATT TTTGATGTTTTTTCC TERM 124 103408 - 103434 + F 100 -12.5 -5.04265 | opp_overlap 103406 103403 103411 ATATGATAAGTGATA TTAGCACTCTT TGAAT AAGAGTGCTAA TTTTTGATGTTTTTT TERM 125 103431 - 103411 - f 74 -9.8 -2.67705 | opp_overlap 103408, overlap 103406 103403 TGATAAGTGATATTA GCACTCTT TGAAT AAGAGTGC TAATTTTTGATGTTT hrcA 103548 - 104582 + | heat-inducible transcription repressor grpE 104585 - 105157 + | heat shock protein GrpE dnaK 105338 - 107167 + | molecular chaperone DnaK TERM 126 107323 - 107347 + F 100 -12.1 -4.70169 | opp_overlap 107323 107325, overlap 107325 CATATTAATAATAAA TAGGCGGGGCG CCT CGCTCCGTCTG TTTTATTAAGTGTCA TERM 127 107335 - 107325 - f 77 -8.2 -3.8457 | opp_overlap 107323 107325, overlap 107323 TATTAATAATAAATA GGCG GGG CGCC TCGCTCCGTCTGTTT TERM 128 107325 - 107345 + F 100 -12.5 -3.96156 | opp_overlap 107325 107323, overlap 107323 TATTAATAATAAATA GGCGGGGCG CCT CGCTCCGTC TGTTTTATTAAGTGT dnaJ 107456 - 108595 + | dnaJ protein TERM 129 108634 - 108600 - f 91 -7.4 -5.14965 | opp_overlap 108605, overlap 108605 ATGTTGATTAAAAAA TAAAAGTCTAGAAT CGAAAGT ATTCTAGACTTTTT TGTATTGCTAGAGGG TERM 130 108629 - 108605 - f 100 -7.3 -5.45813 | opp_overlap 108605, overlap 108600 GATTAAAAAATAAAA GTCTAGAAT CGAAAGT ATTCTAGAC TTTTTTGTATTGCTA TERM 131 108605 - 108629 + F 100 -7.3 -5.49569 | opp_overlap 108605 108600 GATTAAAAAATAAAA GTCTAGAAT CGAAAGT ATTCTAGAC TTTTTTGTATTGCTA TERM 132 109926 - 109938 + G 72 -7.7 -3.66732 | AGTAAAAAATGATTC CTGCT TAA AGCAG TTCTTGGGATCGTTG SAG0099 108709 - 109956 + | GntR family transcriptional regulator truA 110027 - 110803 + | tRNA pseudouridine synthase A SAG0101 110766 - 111524 + | phosphomethylpyrimidine kinase SAG0102 111534 - 111998 + | hypothetical protein SAG0103 111995 - 112564 + | hypothetical protein TERM 133 112567 - 112591 + T 100 -15.9 -4.14627 | opp_overlap 112567 112571, overlap 112571 CCGTAAATTTTAAAA TAAACCTCTGC TCT GCAGAGGTTTA TTATTTATCTCAACG TERM 134 112591 - 112567 - T 100 -15.9 -4.24002 | opp_overlap 112567 112571, overlap 112571 CCGTAAATTTTAAAA TAAACCTCTGC TCT GCAGAGGTTTA TTATTTATCTCAACG TERM 135 112587 - 112571 - T 100 -12.3 -4.69559 | opp_overlap 112567 112571, overlap 112567 AAATTTTAAAATAAA CCTCTGC TCT GCAGAGG TTTATTATTTATCTC TERM 136 112571 - 112587 + T 100 -12.3 -4.65458 | opp_overlap 112571 112567, overlap 112567 AAATTTTAAAATAAA CCTCTGC TCT GCAGAGG TTTATTATTTATCTC SAG0104 113443 - 112601 - | hypothetical protein tig 113600 - 114883 + | trigger factor TERM 137 114899 - 114927 + F 100 -11.9 -4.16767 | opp_overlap 114905 114908, overlap 114905 TTGCTTATTAAATTT TGAAAAGATTGGG CTT CCCAGTCTTTTTA TTTGTGATTATTCTT TERM 138 114921 - 114905 - f 70 -6.5 -4.17491 | opp_overlap 114899 114905, overlap 114908 ATTAAATTTTGAAAA GATTGGG CTT CCCAGTC TTTTTATTTGTGATT TERM 139 114905 - 114921 + F 100 -8.7 -5.4182 | opp_overlap 114905 114908, overlap 114899 ATTAAATTTTGAAAA GATTGGG CTT CCCAGTC TTTTTATTTGTGATT SAG0106 115072 - 115647 + | DNA-directed RNA polymerase subunit delta TERM 140 115723 - 115746 + F 91 -7.4 -5.26119 | opp_overlap 115725, overlap 115725 TTATGAGGTCAGATA AAGCTCCCTA GTGA TAGGGGGCTA TTTTGTTTTTGGGAA TERM 141 115725 - 115744 + F 93 -10 -4.25502 | opp_overlap 115725, overlap 115723 ATGAGGTCAGATAAA GCTCCCTA GTGA TAGGGGGC TATTTTGTTTTTGGG TERM 142 115744 - 115725 - f 77 -7.8 -4.053 | opp_overlap 115725 115723 ATGAGGTCAGATAAA GCTCCCTA GTGA TAGGGGGC TATTTTGTTTTTGGG pyrG 115920 - 117524 + | CTP synthetase TERM 143 117530 - 117553 + F 100 -11 -5.55855 | opp_overlap 117526 117525 TATGAAATAACTTTA TCGCCTCCCA GTAT TAGGAGGCGA TTTTATTTTTTTAGA SAG0108 117633 - 118559 + | hypothetical protein TERM 144 118697 - 118719 + F 100 -12.1 -4.77986 | opp_overlap 118697 TCTCTCCGCAGACTA GTCGAGTTC ATTTG GAACTCGAC TTTTTGCATATTTAA TERM 145 118719 - 118697 - f 87 -12.1 -2.62184 | opp_overlap 118697 TCTCTCCGCAGACTA GTCGAGTTC ATTTG GAACTCGAC TTTTTGCATATTTAA dut 118754 - 119200 + | deoxyuridine 5'-triphosphate nucleotidohydrolase radA 119362 - 120726 + | DNA repair protein RadA TERM 146 120733 - 120751 + F 100 -9.6 -5.14563 | opp_overlap 120730 120735 TCAACATAATGATTA GATTCGGT TCA GCCGAATC TTTTTTGGTGGCGAG SAG0111 120862 - 121359 + | carbonic anhydrase-related protein SAG0112 121513 - 122832 + | pyridine nucleotide-disulfide oxidoreductase TERM 147 122848 - 122867 + F 100 -7.2 -5.60993 | opp_overlap 122848, overlap 122818 GAATATTTTTAAAAA GTAAGGCA ATTT TGCTTTAC TTTTTTTATCGAAAA TERM 148 123133 - 123153 + G 72 -3.9 -4.93661 | overlap 123135 CTTTAACTACCTTTA TGCTCGCCA TCA TGGTGGGGA TTTTGTTATTCGTAT gltX 123041 - 124495 + | glutamyl-tRNA synthetase TERM 149 124527 - 124498 - T 87 -10.9 -3.42359 | opp_overlap 124498 124504, overlap 124490 124504 AGCAAAATTATAATA TAAAAAGTCGTGA ATTT TCACGACTTTTTG TGTACTTTTACCAAT TERM 150 124498 - 124527 + T 100 -13.1 -3.10091 | opp_overlap 124490 124498 124504, overlap 124504 AGCAAAATTATAATA TAAAAAGTCGTGA ATTT TCACGACTTTTTG TGTACTTTTACCAAT TERM 151 124504 - 124521 + T 100 -9.9 -5.07941 | opp_overlap 124498 124504, overlap 124498 ATTATAATATAAAAA GTCGTGA ATTT TCACGAC TTTTTGTGTACTTTT TERM 152 124521 - 124504 - T 100 -9.9 -5.16133 | opp_overlap 124504 124498, overlap 124498 ATTATAATATAAAAA GTCGTGA ATTT TCACGAC TTTTTGTGTACTTTT rbsB 125503 - 124535 - | ribose ABC transporter, periplasmic D-ribose-binding protein rbsC 126488 - 125556 - | ribose ABC transporter, permease protein rbsA 127977 - 126499 - | ribose ABC transporter, ATP-binding protein TERM 153 126861 - 126875 + g 90 -8.6 -4.67552 | opp_overlap 126856, overlap 126856 126853 GATTAATCAATTGTT GCACAA ATG TTGTGC TTGTTTTTTCATCAA TERM 154 126958 - 126972 + g 76 -5 -4.90471 | opp_overlap 126952, overlap 126952 GATATTGAAGTCTAG GATGAG ACC TTCATC TTTTCTATTTTCGGT TERM 155 127023 - 126995 - G 72 -3.8 -5.00616 | gap 1 TTTTCGGTCAAAAAA CCAATGCCCTGCT TGAT AGCTTGGC-TTGG GGTAGTAATAGTGAT rbsD 128391 - 127993 - | D-ribose pyranase TERM 156 128341 - 128366 + gr 71 -7.7 -3.5032 | gap 1, overlap 128339 ATCAGTATGCCCAAG GTCGTCT-GCTA ATT TAGCGAGATGAC TATTTAATATACCAG rbsK 129277 - 128366 - | ribokinase TERM 157 128589 - 128569 - GR 70 -8.3 -3.15861 | opp_overlap 128557 128559 128573, overlap 128571 CACCAGTTGTATCAA CAGCTTTAG TTT CTAAAGCAG GAATTAAATGACTTT TERM 158 128587 - 128571 - GR 76 -9.5 -3.14051 | opp_overlap 128559 128573, overlap 128569 CCAGTTGTATCAACA GCTTTAG TTT CTAAAGC AGGAATTAAATGACT rbsR 130256 - 129270 - | ribose operon repressor RbsR SAG0120 130412 - 130314 - | hypothetical protein TERM 159 130347 - 130365 + g 84 -7.6 -4.60487 | opp_overlap 130350 ATTTTTTAAATAATT TAATGATA AAA TATCATTA TTTTTAGAGGTCATA TERM 160 131501 - 131489 - g 76 -7.7 -4.14013 | opp_overlap 131488 131484 TAAAAGTTGCTAAAA TCGAC CCA GTCGA AGTTATTAATGGGGG SAG0121 130438 - 131526 + | permease, putative SAG0122 131526 - 132212 + | ABC transporter, ATP-binding protein SAG0123 132243 - 132914 + | DNA-binding response regulator SAG0124 132907 - 133977 + | sensor histidine kinase TERM 161 133983 - 134018 + F 100 -19.4 -4.42806 | opp_overlap 133988, overlap 133988 134015 TTTATCATAATTATT TAAAACAATAACTGCC AATT GGCAGTTATTGTTTTA TTTGTTTAGAAATAA TERM 162 133988 - 134013 + F 100 -14.9 -5.18866 | opp_overlap 133988, overlap 133983 CATAATTATTTAAAA CAATAACTGCC AATT GGCAGTTATTG TTTTATTTGTTTAGA TERM 163 134013 - 133988 - f 100 -14.9 -4.24963 | opp_overlap 133983 133988 CATAATTATTTAAAA CAATAACTGCC AATT GGCAGTTATTG TTTTATTTGTTTAGA argG 134131 - 135321 + | argininosuccinate synthase argH 135340 - 136728 + | argininosuccinate lyase fba 136869 - 137750 + | fructose-bisphosphate aldolase TERM 164 137777 - 137793 + T 100 -8.7 -5.55698 | opp_overlap 137777 AGATAATAGTTAAAA GCTCACT TAT GGTGAGC TTTTTTTGGATTATA TERM 165 137793 - 137777 - T 83 -8 -4.31043 | opp_overlap 137777 AGATAATAGTTAAAA GCTCAC TTATG GTGAGC TTTTTTTGGATTATA SAG0128 138751 - 137834 - | L-2-hydroxyisocaproate dehydrogenase TERM 166 138105 - 138095 - G 73 -3.2 -5.14563 | TTTTTTACCAAAAAA GACA GTG TGCC CGCCTTTTAAAGAAG rpmB 138990 - 139178 + | 50S ribosomal protein L28 TERM 167 139234 - 139245 + F 74 -3 -5.44721 | GGCTGATTTGATAGT TAGA TGCC TCTA TTTTTTTACAATAAT TERM 168 139481 - 139454 - g 72 -9.3 -2.74019 | opp_overlap 139454 139452 GATAACTTTCAAGCA CTTTTGCGTAA GGAAAA CTACGCAAAAG GTGTTGTTGTGAGGT SAG0130 139310 - 139675 + | hypothetical protein SAG0131 139708 - 141339 + | DAK2 domain-containing protein TERM 169 141338 - 141392 + F 95 -10.5 -4.49352 | opp_overlap 141340 141341 141349, overlap 141339 141340 141356 TCATGAGCGTTGAAT AATTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAGAG TTTCTATTTTAGTAT TERM 170 141339 - 141391 + F 100 -14 -3.27985 | opp_overlap 141340 141341 141349, overlap 141338 141340 141356 CATGAGCGTTGAATA ATTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAGA GTTTCTATTTTAGTA TERM 171 141390 - 141340 - f 100 -13.1 -3.62775 | opp_overlap 141339 141338 141340 141356, overlap 141341 141349 ATGAGCGTTGAATAA TTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAG AGTTTCTATTTTAGT TERM 172 141340 - 141390 + F 100 -17.5 -2.55706 | opp_overlap 141340 141341 141349, overlap 141339 141338 141356 ATGAGCGTTGAATAA TTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAG AGTTTCTATTTTAGT TERM 173 141389 - 141341 - f 100 -16.6 -2.77344 | opp_overlap 141340 141339 141338 141356, overlap 141340 141349 TGAGCGTTGAATAAT TGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCA GAGTTTCTATTTTAG TERM 174 141381 - 141349 - f 85 -8 -4.50943 | opp_overlap 141340 141339 141338 141356, overlap 141341 141340 GAATAATTGATAAAA TAAAAAATTAGGAG AGATA CTTCTAATTTTTTA TTTTATCAGAGTTTC TERM 175 141356 - 141374 + F 86 -3.9 -5.86976 | opp_overlap 141349 141341 141340, overlap 141340 141339 141338 TGATAAAATAAAAAA TTAGGAG AGATA CTTCTAA TTTTTTATTTTATCA SAG0132 141487 - 142371 + | SPFH domain-containing protein/band 7 family protein TERM 176 142382 - 142429 + T 100 -14.4 -3.16387 | opp_overlap 142388 142389 142394, overlap 142389 142394 GATAATGAACTTTTT ATAGAAGCAAAATAACCAGAGC ATTT GCTCTGGTTATTTTGTGTCTGA CTTATTTATTATAAT TERM 177 142423 - 142388 - T 100 -16.4 -3.494 | opp_overlap 142382 142389 142394, overlap 142389 142394 GAACTTTTTATAGAA GCAAAATAACCAGAGC ATTT GCTCTGGTTATTTTGT GTCTGACTTATTTAT TERM 178 142422 - 142389 - T 100 -19.9 -2.69319 | opp_overlap 142382 142389 142394, overlap 142388 142394 AACTTTTTATAGAAG CAAAATAACCAGAGC ATTT GCTCTGGTTATTTTG TGTCTGACTTATTTA TERM 179 142389 - 142422 + T 100 -19.9 -2.9924 | opp_overlap 142389 142388 142394, overlap 142382 142394 AACTTTTTATAGAAG CAAAATAACCAGAGC ATTT GCTCTGGTTATTTTG TGTCTGACTTATTTA TERM 180 142417 - 142394 - T 100 -14 -4.53034 | opp_overlap 142389 142382 142394, overlap 142389 142388 TTTATAGAAGCAAAA TAACCAGAGC ATTT GCTCTGGTTA TTTTGTGTCTGACTT TERM 181 142394 - 142417 + T 100 -14 -4.62471 | opp_overlap 142394 142389 142388, overlap 142389 142382 TTTATAGAAGCAAAA TAACCAGAGC ATTT GCTCTGGTTA TTTTGTGTCTGACTT SAG0133 142579 - 142463 - | hypothetical protein TERM 182 142855 - 142839 - R 84 -3.7 -5.71712 | opp_overlap 142839 GTGCATATAAAAAAA CGATC GATGAGT GATCG TTTTTCAGCAAACTA SAG0134 143237 - 142947 - | hypothetical protein SAG0135 144319 - 143579 - | amino acid ABC transporter, ATP-binding protein SAG0136 145879 - 144329 - | amino acid ABC transporter, amino acid-binding protein/permease protein TERM 183 145349 - 145369 + g 72 -3.9 -5.01732 | TTGTCTTAATTGATT GAAGTCCCC CAT GGCAACTTC TTTTTTGACACCATT TERM 184 146698 - 146688 - g 90 -4 -5.89921 | ATTACAAGAAAAAAA TTGA ATA TCAA GAGAAGATGATAGAG TERM 185 147315 - 147301 - g 73 -6.4 -4.30719 | opp_overlap 147287 147301 CTCTCTTAGAAGAAA GGGAAT TTC ATCCCC TTATCGTAAAATGTC SAG0137 146015 - 147898 + | hypothetical protein uppP 147944 - 148783 + | undecaprenyl pyrophosphate phosphatase TERM 186 148822 - 148791 - f 86 -9.7 -3.96506 | gap 1, opp_overlap 148799, overlap 148793 148799 TATTCTAAAATATAA CATAAAAAGCTGAG TATTC CTCAGCTTTTTA-G CGTGTTAGGCTGTGA TERM 187 148821 - 148793 - f 100 -13.4 -3.56378 | opp_overlap 148799, overlap 148791 148799 TTCTAAAATATAACA TAAAAAGCTGAG TATTC CTCAGCTTTTTA GCGTGTTAGGCTGTG TERM 188 148799 - 148815 + F 85 -8 -4.66953 | opp_overlap 148799 148793 148791 AATATAACATAAAAA GCTGAG TATTC CTCAGC TTTTTAGCGTGTTAG TERM 189 148815 - 148799 - f 93 -8 -5.18995 | opp_overlap 148799, overlap 148793 148791 AATATAACATAAAAA GCTGAG TATTC CTCAGC TTTTTAGCGTGTTAG TERM 190 148936 - 148919 - g 73 -5.6 -4.62772 | TGGAAATGAAACAAA TCAGTG AAACAA CACTGA AAATTACAATTAGTA TERM 191 148997 - 149019 + G 73 -3.4 -5.1764 | opp_overlap 148987 148990, overlap 148999 TGAAAGATTTCCTAA TCCCTCAG GAGAAGA CTGAGGAA TTTTTCTATTCTGTC TERM 192 149196 - 149208 + G 70 -3.4 -5.03145 | opp_overlap 149175 149196, overlap 149174 TGACATTTCAAAAAT GTCT CCAGA AGAC TTTTTTAAAACATTG SAG0139 148903 - 149658 + | adaptor protein TERM 193 149842 - 149854 + G 73 -6.3 -4.47707 | overlap 149841 AATATTTCTCTCCTT TGTTG TAA CAACA TTATTTTTCATGCCA SAG0140 149660 - 150820 + | glycosyl transferase, group 4 family protein TERM 194 150839 - 150818 - f 78 -5.9 -4.8269 | opp_overlap 150823 150825, overlap 150823 GATAAGCATCAAAAA TAAAAGCCT GAAA AGGCTTTTT TAGTTTTAATCATTT TERM 195 150834 - 150823 - f 83 -5.8 -5.3104 | opp_overlap 150823 150825, overlap 150818 GCATCAAAAATAAAA GCCT GAAA AGGC TTTTTTAGTTTTAAT TERM 196 150823 - 150834 + F 86 -5.8 -5.48054 | opp_overlap 150823 150818, overlap 150825 GCATCAAAAATAAAA GCCT GAAA AGGC TTTTTTAGTTTTAAT SAG0141 150985 - 151755 + | ABC transporter, ATP-binding protein TERM 197 152026 - 152004 - g 85 -9.2 -4.01902 | overlap 152021 AGAGTTAGGAAACAA TCCCAAGTTG GTT CAAATTGGGA CCCAAACCGTCCTTG SAG0142 151792 - 153054 + | hypothetical protein csdB 153056 - 154288 + | selenocysteine lyase SAG0144 154275 - 154718 + | NifU family protein TERM 198 155971 - 155943 - g 76 -4.6 -5.10077 | opp_overlap 155944, overlap 155944 155946 AAAGATTCCAAAAAA TCAGTGTCACAT ATAGA ATGTGACACCAT ATTGATGGATGATAT TERM 199 155970 - 155944 - g 72 -8.1 -3.6442 | opp_overlap 155944, overlap 155943 155946 AAGATTCCAAAAAAT CAGTGTCACAT ATAGA ATGTGACACCA TATTGATGGATGATA TERM 200 155968 - 155946 - g 80 -10.7 -3.38726 | opp_overlap 155944, overlap 155944 155943 GATTCCAAAAAATCA GTGTCACAT ATAGA ATGTGACAC CATATTGATGGATGA SAG0145 154818 - 156236 + | hypothetical protein SAG0146 157495 - 156308 - | penicillin-binding protein 4, putative TERM 201 156958 - 156968 + g 70 -8.2 -3.3164 | AAGCACTCGCTACCG CCCC ACT GGGG TTATAAAAGTGAGTT TERM 202 157000 - 157040 + g 75 -7 -4.35042 | TTGTCATACCGAGTT TCTTGGCGGTTTCATTGA TTCGT TTAATGAAGGCGTCAGGA TTGTTTTGTGATAAG TERM 203 157567 - 157538 - R 100 -7.4 -5.58179 | opp_overlap 157538 TATTATAACAAAAAA TCACTAATAAAA AAGACA TTTCATTAGTGA TTTTTAATTTTATAT TERM 204 157538 - 157567 + r 80 -5.2 -5.15526 | opp_overlap 157538 TATTATAACAAAAAA TCACTAATAAAA AAGACA TTTCATTAGTGA TTTTTAATTTTATAT TERM 205 157618 - 157608 - R 78 -6.8 -4.46514 | overlap 157609 ACCTAGCTAAAGAAA CTGC TGT GCAG CAACTCCTTGTGTCA SAG0147 158883 - 157648 - | D-alanyl-D-alanine carboxypeptidase family protein TERM 206 157827 - 157839 + g 79 -4.8 -5.10029 | CTTTTTTTGTAATAG GAGC AGTAA GCTC TTTTTTAAAGTTAAT TERM 207 160282 - 160241 - g 72 -3.8 -4.91285 | gap 1, opp_overlap 160272 ATGAATATAATAAAA CTGAAGCAGCAAAACTCTT TAAAG AAG-GTTTGGCTGAATCAG GCTTGACTAAGCTAA TERM 208 160333 - 160310 - g 70 -8.8 -3.0274 | overlap 160293 160307 160312 TAAAATTAACAATTA CAGCAGATGC TGAT GCTCCTGCTG CCAAAAACTCTGTTG SAG0148 159124 - 160779 + | oligopeptide ABC transporter, substrate-binding protein, putative TERM 209 160805 - 160832 + F 100 -11.4 -4.43477 | TTACACTAAACCTTT GCAAGAATTGGT AATT GCCAGTTCTTGC TTTTGGTTAAGTAAA SAG0149 160898 - 161812 + | oligopeptide ABC transporter, permease protein SAG0150 161822 - 162853 + | oligopeptide ABC transporter, permease protein SAG0151 162866 - 163912 + | oligopeptide ABC transporter, ATP-binding protein TERM 210 163970 - 163933 - g 80 -2.4 -5.61824 | overlap 163937 GAAAATCGAAAAAAA TTAGTTGAA-GTCAAAAA TGTT TCTTTGACCTTCAA-TAA AGGAAAAGCTAATGA SAG0152 163912 - 164844 + | oligopeptide ABC transporter, ATP-binding protein TERM 211 164866 - 164842 - f 81 -10.2 -3.05653 | opp_overlap 164842 164847 164863, overlap 164840 164847 AAAAAACAAATATTA TAAAAGATGG CTAGC CCATCTTTTA TTTTTTTACTAATAA TERM 212 164842 - 164866 + F 100 -10.2 -5.55664 | opp_overlap 164842 164840 164847, overlap 164847 164863 AAAAAACAAATATTA TAAAAGATGG CTAGC CCATCTTTTA TTTTTTTACTAATAA TERM 213 164847 - 164861 + F 90 -5.7 -5.57888 | opp_overlap 164842 164840 164847, overlap 164842 ACAAATATTATAAAA GATGG CTAGC CCATC TTTTATTTTTTTACT TERM 214 164861 - 164847 - f 74 -5.7 -4.59207 | opp_overlap 164847 164842, overlap 164842 164840 ACAAATATTATAAAA GATGG CTAGC CCATC TTTTATTTTTTTACT TERM 215 165221 - 165205 - f 83 -6.6 -4.86216 | ACAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 216 165235 - 165225 - f 79 -6.8 -4.61868 | overlap 165227 165232 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 217 166256 - 166269 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 218 167358 - 167339 - f 95 -12.2 -3.62096 | opp_overlap 167338 167337 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 219 170255 - 170272 + F 86 -4.1 -5.80364 | opp_overlap 170255, overlap 170257 GAGTAGATAAAGGGA GACTAAC TTTG GTTAGCC TTTTTTTATTGGAAT TERM 220 170680 - 170655 - g 70 -3.2 -4.95758 | overlap 170656 ATTAGATTAGAAAAA TCCATTCCTG TCTGTG CAGGACTGGG GGGTGGTTCTACTGA ispE 170382 - 171233 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 221 171714 - 171725 + G 71 -4.4 -4.82518 | AAAGGACGAAAAGGT CGTT TTAG AACG TTTTCTTGATCTTTT adcR 171319 - 171762 + | adc operon repressor AdcR SAG0155 171765 - 172475 + | zinc ABC transporter, ATP-binding protein SAG0156 172465 - 173277 + | zinc ABC transporter, permease protein TERM 222 173287 - 173307 + T 100 -7.7 -5.76237 | opp_overlap 173273 173287 CGTTAAATAAAAAAA TCTATCTTA TTC TAGGATAGA TTTTTTATTTATCTC TERM 223 173307 - 173287 - T 95 -5.5 -5.95539 | opp_overlap 173287, overlap 173273 CGTTAAATAAAAAAA TCTATCTTA TTC TAGGATAGA TTTTTTATTTATCTC TERM 224 173479 - 173454 - T 100 -14.1 -5.31275 | opp_overlap 173453 173452 173447 173456 TTTTAGGATAAAAAA TACTACCGGCA ATTT TGCCGGCAGTA AATTGTAATTATTGT TERM 225 173456 - 173477 + T 77 -10.1 -2.64462 | opp_overlap 173454, overlap 173453 173452 173447 TTAGGATAAAAAATA CTACCGGCA ATTT TGCCGGCAG TAAATTGTAATTATT TERM 226 174171 - 174159 - T 78 -9.1 -3.49076 | opp_overlap 174158 AAAATTGATAACCAA CGAGG TGA CCTCG GTCTATAAGCCAAGT TERM 227 174538 - 174568 + T 71 -5.6 -4.71401 | opp_overlap 174538 174541, overlap 174541 CTAAACCCTTCTAAA TGATATTTGTGAAG GCC TTTCACAAGTATAA TTTTATCATTTTATT TERM 228 175018 - 175055 + T 100 -16.7 -3.10876 | opp_overlap 175027, overlap 175027 AGGAATGTTGTTCAT TAATAAAAAGTGTAGTC AATT GACTACACTTTTTATTG TCTTGAAATATTATT TERM 229 175046 - 175027 - T 100 -10.8 -5.1356 | opp_overlap 175018 175027 GTTCATTAATAAAAA GTGTAGTC AATT GACTACAC TTTTTATTGTCTTGA TERM 230 175027 - 175046 + T 100 -10.8 -5.29716 | opp_overlap 175027, overlap 175018 GTTCATTAATAAAAA GTGTAGTC AATT GACTACAC TTTTTATTGTCTTGA tyrS 176356 - 175097 - | tyrosyl-tRNA synthetase TERM 231 175655 - 175669 + g 77 -2.8 -5.58454 | CCAAACAGCATTTCC TTCAGA TTT TCCGAA TTTTTTTCCTGTAGA TERM 232 176779 - 176747 - g 100 -14.3 -2.94194 | opp_overlap 176740 176774 CACAAATTTCAGAGA TTGCCACTGATTTAC AAC GTACACCAGTGGCAA AGGATGCTATATCTG TERM 233 178252 - 178222 - g 72 -8.4 -3.53012 | CGTGTCTTTTCGAAA GCAACAGCTACTAT CTT ACAGCAGCTATTAC ATGGACCAATTAACT SAG0159 176467 - 178764 + | penicillin-binding protein 1B, putative TERM 234 178795 - 178818 + F 100 -10.4 -5.42198 | GATAGTTTTATTTGA GGAGAATAGA GTGA TCTGTTCTCC TTTTATTTTTTCCAA TERM 235 179074 - 179110 + F 71 -6.8 -4.06182 | gap 1, opp_overlap 179074, overlap 179072 CGACCTAGATATACA GCAGTTAAATC-AACTT GATA AAGTGAGATTTAGCTGC TCTTTTTGTGCCTAA rpoB 179288 - 182863 + | DNA-directed RNA polymerase subunit beta TERM 236 183250 - 183238 - g 76 -7.7 -4.09739 | GTAACCCGTGCAAAA GTTCG TCG CGAAC GTATGGGACATATCG TERM 237 183653 - 183637 - g 72 -3.7 -5.0133 | GATGCCTTTAAAAAA TCTGG AAATAAA CCAGA ATGGATGGTTCTTAA rpoC 182980 - 186630 + | DNA-directed RNA polymerase subunit beta' TERM 238 186660 - 186638 - f 93 -9.2 -4.92777 | opp_overlap 186638 186658 AAGATTAATCAAAAA GAACTTGAGT TTA ACTCAGGTTC TTTTTTTACAAGAAT TERM 239 186638 - 186660 + F 100 -11.4 -5.40474 | opp_overlap 186638, overlap 186658 AAGATTAATCAAAAA GAACTTGAGT TTA ACTCAGGTTC TTTTTTTACAAGAAT SAG0162 186744 - 187109 + | hypothetical protein TERM 240 187212 - 187245 + F 100 -12.7 -5.09259 | opp_overlap 187218 187220, overlap 187220 CTCTCAAGAAATCAT TGAAAAGATCTCACC AATT GGTGAGATTTTTTTA TTTTATTTTCGAATA TERM 241 187239 - 187218 - f 76 -7.3 -4.26681 | opp_overlap 187212 187220, overlap 187220 AGAAATCATTGAAAA GATCTCACC AATT GGTGAGATT TTTTTATTTTATTTT TERM 242 187220 - 187237 + F 100 -9.9 -6.17669 | opp_overlap 187220 187218, overlap 187212 AAATCATTGAAAAGA TCTCACC AATT GGTGAGA TTTTTTTATTTTATT TERM 243 187237 - 187220 - f 86 -9.9 -3.72347 | opp_overlap 187212 187220, overlap 187218 AAATCATTGAAAAGA TCTCACC AATT GGTGAGA TTTTTTTATTTTATT TERM 244 188144 - 188128 - g 74 -3.7 -5.09426 | GGTAATTTTAAAAAA CACTCAT CAG ACAAGTG GAATAGACAAGTGGA cglA 187282 - 188253 + | competence protein CglA TERM 245 188720 - 188710 - g 73 -6.8 -4.22652 | TTATATTATTCAAAA GCGA TTG TCGC GCATTAAAGTAGCTT cglB 188342 - 189190 + | competence protein CglB SAG0165 189187 - 189642 + | hypothetical protein SAG0166 189620 - 189991 + | hypothetical protein TERM 246 190289 - 190271 - g 74 -4.6 -4.99435 | opp_overlap 190275, overlap 190275 GTGAATAACCAAAAA TTACGTCA ACT TGACTTAA GTCAAGAAGAATGGC SAG0167 190106 - 191080 + | hypothetical protein ackA 191112 - 192305 + | acetate kinase TERM 247 192371 - 192318 - f 95 -9.3 -5.18357 | gap 1, opp_overlap 192325 192328 192335, overlap 192307 192306 192325 192328 192335 TAAGTTATCAAAAAA TTGATAAGACCAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG-TCTTTTGAA CAGATATGTAAAATG TERM 248 192325 - 192364 + F 100 -14 -4.09243 | gap 1, opp_overlap 192318 192325 192328 192335, overlap 192328 192335 TCAAAAAATTGATAA GACCAGAAAAGTTGATAGT TTA ACTATCAACTTTTTT-GTC TTTTGAACAGATATG TERM 249 192364 - 192325 - f 95 -11.8 -3.5944 | gap 1, opp_overlap 192325 192328 192335, overlap 192318 192328 192335 TCAAAAAATTGATAA GACCAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG-TC TTTTGAACAGATATG TERM 250 192328 - 192362 + F 100 -16.8 -3.6422 | opp_overlap 192325 192318 192328 192335, overlap 192325 192335 AAAAATTGATAAGAC CAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG TCTTTTGAACAGATA TERM 251 192362 - 192328 - f 100 -14.6 -2.5967 | opp_overlap 192328 192325 192335, overlap 192325 192318 192335 AAAAATTGATAAGAC CAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG TCTTTTGAACAGATA TERM 252 192355 - 192335 - f 100 -11.3 -4.56629 | opp_overlap 192328 192325 192335, overlap 192328 192325 192318 GATAAGACCAGAAAA GTTGATAGT TTA ACTATCAAC TTTTTTGTCTTTTGA TERM 253 192335 - 192355 + F 100 -11.3 -5.63645 | opp_overlap 192335 192328 192325 192318, overlap 192328 192325 GATAAGACCAGAAAA GTTGATAGT TTA ACTATCAAC TTTTTTGTCTTTTGA TERM 254 192441 - 192401 - f 95 -9.3 -5.26316 | GTACTTGACAAAAAA TGTATAGTTAACTATAC TATGAAT GTAAAGCTAACTATACA AAAAAGGTGTAAGAT SAG0169 192457 - 192663 + | Cro/CI family transcriptional regulator SAG0170 192722 - 192859 + | hypothetical protein SAG0171 192900 - 193355 + | hypothetical protein TERM 255 193461 - 193471 + G 78 -5.4 -5.00339 | opp_overlap 193454 193452 GCAAAATTTTAGCTT TGCT AAT AGCA TTTTTAGTTATTAAT TERM 256 193797 - 193838 + G 78 -9.7 -3.46302 | opp_overlap 193832, overlap 193800 CACTAGCTTTGATGT TAATTTTTGCCATAATTGG TGCC CCTATTATGGAAGAAATTA TATTTCGCTATATTA TERM 257 193800 - 193835 + G 71 -7 -3.85256 | opp_overlap 193832, overlap 193797 TAGCTTTGATGTTAA TTTTTGCCATAATTGG TGCC CCTATTATGGAAGAAA TTATATTTCGCTATA SAG0172 193424 - 194089 + | protease, putative TERM 258 194131 - 194079 - T 100 -13.1 -2.87957 | opp_overlap 194095, overlap 194095 TAATCAGTACAATGA TGAATAACTAAAAAAACTTTGAGCA ATT TGCTCAAAGTTTTTTTGCTTTCTCA ATAGTAGCATCAATG TERM 259 194095 - 194115 + T 100 -12.7 -5.75822 | opp_overlap 194095 194079 GAATAACTAAAAAAA CTTTGAGCA ATT TGCTCAAAG TTTTTTTGCTTTCTC TERM 260 194115 - 194095 - T 100 -12.7 -5.71638 | opp_overlap 194095, overlap 194079 GAATAACTAAAAAAA CTTTGAGCA ATT TGCTCAAAG TTTTTTTGCTTTCTC proC 194880 - 194110 - | pyrroline-5-carboxylate reductase pepA 196017 - 194950 - | glutamyl-aminopeptidase SAG0175 196441 - 196202 - | hypothetical protein SAG0176 196602 - 196886 + | hypothetical protein SAG0177 196883 - 197206 + | thioredoxin family protein SAG0178 197239 - 197865 + | tRNA-binding domain-containing protein TERM 261 197872 - 197895 + T 100 -12.6 -4.93365 | opp_overlap 197872 AAAAATTAGTAAAAA TCAACTTAGC TTCA GCTAAGTTGA TTTTTAGTTGTAAAC TERM 262 197895 - 197872 - T 100 -12.6 -4.88129 | opp_overlap 197872 AAAAATTAGTAAAAA TCAACTTAGC TTCA GCTAAGTTGA TTTTTAGTTGTAAAC SAG0179 198635 - 197919 - | hypothetical protein TERM 263 198793 - 198774 - g 71 -5 -4.64766 | CTGAGATGGTAAAAA CACCAACT GACA AGTCAGTG ACGCGTGCAACTGTT ssb-1 198716 - 199111 + | single-strand DNA-binding protein TERM 264 199149 - 199172 + F 100 -10.4 -5.7946 | opp_overlap 199148 199147 ATTTCTAAATATACT GGTTGCTTTT CACA GAAAGCAACC TTTTTTTATTGAAAA SAG0181 199235 - 199879 + | HAD superfamily hydrolase TERM 265 199931 - 199956 + G 70 -2.7 -5.14163 | gap 1 TGTTGTTATTCCAAA GGCTAGGAATTA TTA TGATTT-TAGCC TTTTTATTGGTAAAT SAG0182 199906 - 201651 + | sensor histidine kinase, putative SAG0183 201632 - 202372 + | response regulator TERM 266 202405 - 202430 + F 93 -6.3 -5.53991 | gap 1 TCCCTTTGTTGTTTA GAAGCTTGAATT TGC AATTCG-GCTTC TTTTTTTGGTAACTG SAG0184 202542 - 202997 + | hypothetical protein SAG0185 202999 - 203727 + | hypothetical protein TERM 267 203744 - 203761 + T 100 -9.9 -4.96762 | TAATAGCGTGGTTAA GGCTGAA TTTA TTCAGCC TTTTTATGATGTCTA SAG0186 203949 - 203839 - | hypothetical protein SAG0187 203970 - 205598 + | oligopeptide ABC transporter, oligopeptide-binding protein TERM 268 205631 - 205683 + F 100 -12.2 -5.055 | gap 1, opp_overlap 205652, overlap 205680 GGCTACTTTAAGTTT GGAGTCAGAGAAAACAATGTACACC TTAT GGTGTGAATGGTTTCCTC-GACTCC TTTTTTAACAATTAA TERM 269 206506 - 206518 + G 82 -7.7 -4.50976 | TTTGGAGGATCCGTT CTTGC TGA GCAAG TTTTCTCATATCCAG SAG0188 205711 - 206688 + | oligopeptide ABC transporter, permease protein SAG0189 206685 - 207506 + | oligopeptide ABC transporter, permease protein SAG0190 207518 - 208321 + | peptide ABC transporter, ATP-binding protein SAG0191 208305 - 208931 + | peptide ABC transporter, ATP-binding protein TERM 270 208962 - 208938 - f 71 -8.7 -2.82658 | opp_overlap 208938, overlap 208937 208940 GGAGATTAAAAAACT CACCTACTA TATCAAT TAGTAGGTG TTTTTTATTAAGAGA TERM 271 208938 - 208962 + F 100 -8.7 -5.4505 | opp_overlap 208938 208937 208940 GGAGATTAAAAAACT CACCTACTA TATCAAT TAGTAGGTG TTTTTTATTAAGAGA SAG0192 209214 - 211244 + | PTS system, IIABC components TERM 272 212687 - 212670 - g 75 -9.9 -2.79327 | overlap 212669 TTATTCGAGCGAAAT CTCGAGA CAAT TCTCGAG TACCAATGCAATGGG SAG0193 211466 - 213091 + | alpha amylase family protein TERM 273 213088 - 213143 + F 85 -10.9 -3.28924 | opp_overlap 213092 213103, overlap 213091 213103 AGCTATCTTAGTGTC ATAACATTTTAAAAACCTTTACTTA TTCAAT TAAGTAAAGGTTTTTAAAGTGCTGC TTGTGGAAAGGAATC TERM 274 213091 - 213140 + F 100 -14.8 -2.82623 | opp_overlap 213092 213103, overlap 213088 213103 TATCTTAGTGTCATA ACATTTTAAAAACCTTTACTTA TTCAAT TAAGTAAAGGTTTTTAAAGTGC TGCTTGTGGAAAGGA TERM 275 213139 - 213092 - f 100 -16.1 -3.31263 | opp_overlap 213091 213088 213103, overlap 213103 ATCTTAGTGTCATAA CATTTTAAAAACCTTTACTTA TTCAAT TAAGTAAAGGTTTTTAAAGTG CTGCTTGTGGAAAGG TERM 276 213103 - 213128 + F 90 -9.2 -4.63527 | opp_overlap 213092 213103, overlap 213091 213088 ATAACATTTTAAAAA CCTTTACTTA TTCAAT TAAGTAAAGG TTTTTAAAGTGCTGC TERM 277 213128 - 213103 - f 90 -9.2 -4.67556 | opp_overlap 213103 213091 213088, overlap 213092 ATAACATTTTAAAAA CCTTTACTTA TTCAAT TAAGTAAAGG TTTTTAAAGTGCTGC SAG0194 213307 - 215226 + | BglG family transcriptional antiterminator SAG0195 216373 - 215240 - | IS1548 transposase SAG0196 216468 - 216668 + | hypothetical protein SAG0197 216671 - 216955 + | PTS system, IIB component, putative TERM 278 218174 - 218184 + G 73 -5.4 -4.54727 | overlap 218182 AAAGGGTCAACATTC TCAG ATG CTGA TTTTGGTTTGACCGG ulaA 216968 - 218323 + | ascorbate-specific PTS system enzyme IIC SAG0199 218326 - 219183 + | transketolase, N-terminal subunit SAG0200 219180 - 220109 + | transketolase, C-terminal subunit TERM 279 220145 - 220104 - f 91 -10.4 -4.005 | opp_overlap 220107 220116, overlap 220107 220110 220116 AAATCAATTTATAAA TCATAACAAAAAGGCAAC ATTGGA GTTGCCTTTTTGTTATTT TCTGAAATTTTTAAG TERM 280 220107 - 220142 + F 100 -16.5 -4.47485 | opp_overlap 220107 220104 220110 220116, overlap 220116 TCAATTTATAAATCA TAACAAAAAGGCAAC ATTGGA GTTGCCTTTTTGTTA TTTTCTGAAATTTTT TERM 281 220142 - 220107 - f 100 -16.5 -3.04203 | opp_overlap 220107 220116, overlap 220104 220110 220116 TCAATTTATAAATCA TAACAAAAAGGCAAC ATTGGA GTTGCCTTTTTGTTA TTTTCTGAAATTTTT TERM 282 220139 - 220110 - f 100 -13.8 -3.65317 | opp_overlap 220107 220116, overlap 220107 220104 220116 ATTTATAAATCATAA CAAAAAGGCAAC ATTGGA GTTGCCTTTTTG TTATTTTCTGAAATT TERM 283 220116 - 220133 + F 93 -7 -5.47964 | opp_overlap 220116 220110 220107 220104, overlap 220107 AAATCATAACAAAAA GGCAAC ATTGGA GTTGCC TTTTTGTTATTTTCT TERM 284 220133 - 220116 - f 88 -7 -5.25772 | opp_overlap 220107 220116, overlap 220110 220107 220104 AAATCATAACAAAAA GGCAAC ATTGGA GTTGCC TTTTTGTTATTTTCT TERM 285 220389 - 220371 - g 77 -10.4 -2.84999 | opp_overlap 220370 220358 220380 220383, overlap 220382 ACCAAATTTAGGATA CTTGAAAG TTA CTTTCAAG GTATTGAAAATATGT SAG0201 220218 - 221477 + | oxidoreductase, putative TERM 286 221728 - 221711 - g 70 -5.5 -4.38219 | ACAACACAAAAAAGA CCACGCT ACTT ACCGTGG ATTGATGAAAAAAAT rpsO 221565 - 221834 + | 30S ribosomal protein S15 TERM 287 221858 - 221877 + F 100 -9.4 -5.79595 | opp_overlap 221858 AGAGTCAAGTAAAAA CACTAGAA AATT TTCTAGTG TTTTTTGTTTTAAAC TERM 288 221877 - 221858 - f 100 -9.4 -4.89009 | opp_overlap 221858 AGAGTCAAGTAAAAA CACTAGAA AATT TTCTAGTG TTTTTTGTTTTAAAC TERM 289 222012 - 222039 + F 80 -6.4 -4.81851 | opp_overlap 222012 222011 AATCATTGTAACAAG GTCTGATTGCTA GTAT TAATAATCAGAC TTTTTACGTTTACAT pnp 222215 - 224344 + | polynucleotide phosphorylase/polyadenylase TERM 290 224920 - 224910 - g 73 -5.4 -4.59853 | overlap 224918 TTAAGTTTTGAAAAA TGGT ATA ACCA TAATGATTTTGGTGG SAG0204 224346 - 225098 + | hypothetical protein cysE 225107 - 225691 + | serine O-acetyltransferase SAG0206 225701 - 225883 + | putative lipoprotein cysS 225880 - 227223 + | cysteinyl-tRNA synthetase SAG0208 227216 - 227602 + | hypothetical protein TERM 291 227633 - 227604 - f 90 -8 -4.89063 | opp_overlap 227610, overlap 227610 CCATTGAAAAATAAA CAAAAAGAGAGG CTATAT CCTCTCTTTTTT ATAGAGACATTAGGA TERM 292 227627 - 227610 - f 100 -7 -5.63012 | opp_overlap 227610, overlap 227604 AAAAATAAACAAAAA GAGAGG CTATAT CCTCTC TTTTTTATAGAGACA TERM 293 227610 - 227627 + F 88 -7 -5.24129 | opp_overlap 227604 227610 AAAAATAAACAAAAA GAGAGG CTATAT CCTCTC TTTTTTATAGAGACA SAG0209 227705 - 228460 + | RNA methyltransferase SAG0210 228457 - 228975 + | hypothetical protein SAG0211 229068 - 229928 + | DegV family protein TERM 294 229969 - 229986 + F 74 -5.7 -4.58424 | opp_overlap 229971 TATGTTCTTTTAGTA TACATTT TATA AAATGTA TTTTATATGATGCTA SAG0212 230061 - 230159 + | hypothetical protein SAG0213 230273 - 230392 + | hypothetical protein rplM 230809 - 231255 + | 50S ribosomal protein L13 TERM 295 231392 - 231375 - g 84 -4.2 -5.57396 | ACAATCAATAAAAAA GATGTA GAAGAG TACATC CCACACGCAGACCTT rpsI 231276 - 231668 + | 30S ribosomal protein S9 TERM 296 231695 - 231721 + T 100 -12.4 -5.77632 | opp_overlap 231695 CATCAACGATTACAA GCATTTTGCAAG TCT CTTGCAAGGTGC TTTTTTTGTCGTTTT TERM 297 231721 - 231695 - T 73 -8 -3.47941 | opp_overlap 231695 CATCAACGATTACAA GCATTTTGCAAG TCT CTTGCAAGGTGC TTTTTTTGTCGTTTT SAG0216 231783 - 231682 - | hypothetical protein SAG0217 232950 - 231796 - | phage integrase family site specific recombinase TERM 298 232109 - 232129 + g 100 -8.3 -5.2853 | opp_overlap 232109 TGCTCGATAGAAAGA GGTGCAACT GCT AGTTGTGCC TTTTCTTTTTGGCTG TERM 299 232909 - 232920 + g 89 -5.8 -5.28481 | opp_overlap 232909 232907 GACAAAATACAAATA GCCA TTTT TGGC TTTTTTGCTTGGGTA SAG0218 233491 - 233015 - | Cro/CI family transcriptional regulator SAG0219 233645 - 233950 + | hypothetical protein TERM 300 234191 - 234180 - g 74 -3.6 -5.16206 | overlap 234182 AAAGCAATAGAAAAA GCCC TTGA GGAC AAAGAGCTATATAAG TERM 301 234224 - 234235 + G 74 -3.6 -5.14477 | TATGGTTCGTATGGC TGGC TTGT GCCG TTTTTTAGATGTCTC SAG0220 234087 - 234365 + | hypothetical protein SAG0221 234376 - 234606 + | hypothetical protein SAG0222 234619 - 234945 + | hypothetical protein TERM 302 235473 - 235453 - g 100 -8.4 -5.42514 | GGAGAAATCAAAAAA GCTAAAGA CCGTT TCTTTAGC TACAAGAAAAATAAA TERM 303 235501 - 235489 - g 79 -4.8 -5.09221 | TACAAGAAAAATAAA CAGG TTCCG CCTG ATGACATTATCGAAA SAG0223 234949 - 235578 + | hypothetical protein TERM 304 235870 - 235850 - g 86 -4.6 -5.71712 | gap 1, overlap 235851 GCGCAGACAAAAAAA TCGG-CGCC GTTA GGCGACCGC CAAAAAGAAAGGAGG TERM 305 235869 - 235851 - g 79 -8.1 -4.01943 | gap 1, overlap 235850 CGCAGACAAAAAAAT CGG-CGCC GTTA GGCGACCG CCAAAAAGAAAGGAG TERM 306 236111 - 236077 - g 70 -6.5 -4.02424 | gap 1, opp_overlap 236083, overlap 236083 ATGAATTATGACAAA CAAAAAGGACAAGACC GCAA GG-CTCGTCCATTTCG CTTGGAGTTTAATCC TERM 307 236105 - 236083 - g 89 -6.3 -5.40464 | gap 1, opp_overlap 236083, overlap 236077 TATGACAAACAAAAA GGACAAGACC GCAA GG-CTCGTCC ATTTCGCTTGGAGTT TERM 308 236383 - 236373 - g 76 -3.2 -5.35721 | ATATAACAAGAAAAA GGAA CAA CTCC AAAATGGTACTGATA TERM 309 236419 - 236407 - g 73 -6.3 -4.40605 | opp_overlap 236406 ACTGATAAAGATAAA GACTT TGC AAGTC AATTTAAGCACTGGT SAG0224 235768 - 236766 + | replication initiation protein, putative SAG0225 236802 - 237236 + | hypothetical protein TERM 310 237223 - 237242 + F 85 -10.8 -3.29511 | overlap 237211 TAGTGGCAATATGGC TTGCCATC TTTT GATGGCAA TTGTCGGACAATGCG SAG0226 237552 - 238808 + | recombination protein TERM 311 238906 - 238891 - f 73 -9 -2.96031 | opp_overlap 238905, overlap 238890 GTCAGGCTAAAGAAC TGGCGA CCGA TCGCCA TAGACTAAAACAGTC SAG0227 238976 - 239446 + | hypothetical protein TERM 312 239720 - 239740 + T 74 -5.4 -4.92777 | opp_overlap 239720, overlap 239711 TGTAATCTTCAAAAA GCCTTGGT ATTAC GCTAAGGC TTTTTGATTGCTATT SAG0228 240086 - 239751 - | hypothetical protein SAG0229 240363 - 240076 - | hypothetical protein TERM 313 240445 - 240430 - H 86 -4 -5.83226 | AAGTCAATAAAAAAA TCCCAA TTGA TTGAGA TAGCTTTCGTTTATT TERM 314 240687 - 240709 + H 100 -11.4 -5.03747 | opp_overlap 240686 240687 240689 ATCAACGTTTCAAAG CACTTTGCAA GTC TTGCAAGGTG TTTTTTAAAACCTTT TERM 315 240709 - 240687 - H 72 -9.2 -2.74501 | opp_overlap 240687, overlap 240686 240689 ATCAACGTTTCAAAG CACTTTGCAA GTC TTGCAAGGTG TTTTTTAAAACCTTT SAG0230 240870 - 241160 + | hypothetical protein TERM 316 241184 - 241217 + F 78 -9.7 -3.18945 | opp_overlap 241175 241183, overlap 241188 TTCAAATTCATAAGT TTAACTTAGGAAGGC ATAA GCTCTCCTAAGTTGA TATATTATAGCTAGA TERM 317 241188 - 241213 + F 73 -8.3 -3.40191 | opp_overlap 241175 241183, overlap 241184 AATTCATAAGTTTAA CTTAGGAAGGC ATAA GCTCTCCTAAG TTGATATATTATAGC SAG0231 241262 - 241669 + | hypothetical protein TERM 318 241847 - 241834 - gf 85 -2.5 -5.80248 | GAAGATAGAAAAAAA TTTAA GGTA TTAAA AACTTCTCCTGACGA SAG0232 241669 - 242229 + | hypothetical protein SAG0233 242202 - 242882 + | hypothetical protein SAG0234 242867 - 243253 + | hypothetical protein SAG0235 243287 - 243568 + | hypothetical protein SAG0236 243659 - 243757 + | hypothetical protein TERM 319 243994 - 244019 + F 100 -10.5 -5.40625 | opp_overlap 243996 ATCAGCGATTGGAAG CACTTCATGGT TCAC ACCATGGGGTG TTTTTTGTGTAATAT SAG0237 244185 - 244289 + | hypothetical protein SAG0238 244286 - 244411 + | hypothetical protein SAG0239 244411 - 245271 + | MutR family transcriptional regulator TERM 320 245267 - 245299 + F 87 -8.8 -4.2331 | gap 1, opp_overlap 245266 245269 245276, overlap 245268 245269 245276 ATAGGGTAACAAGAT TAT-AAAAAATCCCA TTTA TGGGATTTTTTAATA TTTCTCCTTTTGGTT TERM 321 245268 - 245297 + F 82 -9.5 -3.69497 | opp_overlap 245266 245269 245276, overlap 245267 245269 245276 TAGGGTAACAAGATT ATAAAAAATCCCA TTTA TGGGATTTTTTAA TATTTCTCCTTTTGG TERM 322 245296 - 245269 - f 100 -13 -2.85813 | opp_overlap 245269 245268 245267 245276, overlap 245266 245276 AGGGTAACAAGATTA TAAAAAATCCCA TTTA TGGGATTTTTTA ATATTTCTCCTTTTG TERM 323 245269 - 245296 + F 100 -13 -2.80614 | opp_overlap 245266 245269 245276, overlap 245268 245267 245276 AGGGTAACAAGATTA TAAAAAATCCCA TTTA TGGGATTTTTTA ATATTTCTCCTTTTG TERM 324 245276 - 245289 + F 93 -6.7 -5.34055 | opp_overlap 245269 245266 245276, overlap 245269 245268 245267 CAAGATTATAAAAAA TCCCA TTTA TGGGA TTTTTTAATATTTCT TERM 325 245289 - 245276 - f 93 -6.7 -5.36965 | opp_overlap 245276 245269 245268 245267, overlap 245269 245266 CAAGATTATAAAAAA TCCCA TTTA TGGGA TTTTTTAATATTTCT SAG0240 245344 - 246525 + | transporter, putative TERM 326 246559 - 246576 + T 74 -5.6 -4.83593 | opp_overlap 246559 GAAACATCAAAAAAA CTTGTC TCTACT GACAAG TTTTTAATAGTTATT TERM 327 246576 - 246559 - T 87 -5.6 -5.66989 | opp_overlap 246559 GAAACATCAAAAAAA CTTGTC TCTACT GACAAG TTTTTAATAGTTATT SAG0241 247228 - 246587 - | amino acid ABC transporter, permease protein SAG0242 248164 - 247238 - | amino acid ABC transporter, amino acid-binding protein TERM 328 247354 - 247378 + g 84 -3.5 -5.72207 | overlap 247357 247358 TCGTTTTTAAATTGA TTTTACCATCG AGT CGATGGAGTAA TTTTTTTAGTTTAGG SAG0243 248802 - 248167 - | amino acid ABC transporter, permease protein SAG0244 249947 - 248802 - | amino acid ABC transporter, ATP-binding protein TERM 329 248944 - 248906 - G 87 -11.4 -3.63515 | gap 1, opp_overlap 248906 248904 TCTCATGGTCAACAA CTGGAGCGTATTTTAAA CCAAGT TTTAAAATACGCTC-AG CAGTATTTCTAAGTA TERM 330 249687 - 249703 + g 70 -8.1 -3.43618 | opp_overlap 249679 249684 CATTAAACCAATGTT TTGGATA ACA TATCCAA TTCTGCGTCTTAATT TERM 331 250348 - 250332 - H 83 -6.6 -4.89605 | CAAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 332 250362 - 250352 - H 79 -6.8 -4.61868 | overlap 250354 250359 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 333 251383 - 251396 + H 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 334 252485 - 252466 - H 95 -12.2 -3.62096 | opp_overlap 252465 252464 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 335 255480 - 255465 - H 95 -9 -5.10877 | opp_overlap 255476 ATAAGAAAGTAAAAA CCAAGC AATA GCTTGG GCGCGTAGCTCAGGT TERM 336 256356 - 256335 - H 100 -11.7 -3.95073 | opp_overlap 256335 CGGTATACTTATAAA GACAAGGTT TCTA AACCTTGTC TTTTTTCTACTAGAT TERM 337 256335 - 256356 + H 100 -11.7 -5.31877 | opp_overlap 256335 CGGTATACTTATAAA GACAAGGTT TCTA AACCTTGTC TTTTTTCTACTAGAT TERM 338 257027 - 257011 - g 71 -4.5 -4.85599 | TTTAGCTCATAAAAA TGATATC CCA AATATCA AATCAATGGGAATGC SAG0245 256634 - 257092 + | protein of unknown function/lipoprotein, putative TERM 339 257897 - 257883 - g 81 -4.2 -5.40072 | TTTCTGCTAAAAAAA TCCAAG AAG CTGGGA AGCATGTTACCTACT SAG0246 257156 - 257962 + | hypothetical protein SAG0247 258440 - 258790 + | hypothetical protein SAG0248 258809 - 259081 + | hypothetical protein SAG0249 259091 - 259441 + | hypothetical protein TERM 340 259633 - 259620 - f 79 -6.7 -4.59773 | TGTTATCTTTAAAAA GTGCT CAGT AGCAC TCAAAATCCATTGTC TERM 341 259688 - 259724 + F 85 -3.2 -6.09133 | gap 1, opp_overlap 259695, overlap 259695 CGGCCGCCGGTATAC T-TATAAAGACAAGGTT TAGA AACCTTGTCTTTTTCTA TTTTTTTTTAAAATC TERM 342 259716 - 259695 - f 100 -11.7 -3.95073 | opp_overlap 259688 259695 CGGTATACTTATAAA GACAAGGTT TAGA AACCTTGTC TTTTTCTATTTTTTT TERM 343 259695 - 259716 + F 100 -11.7 -5.44837 | opp_overlap 259695, overlap 259688 CGGTATACTTATAAA GACAAGGTT TAGA AACCTTGTC TTTTTCTATTTTTTT TERM 344 260214 - 260197 - f 79 -8.5 -3.81885 | opp_overlap 260197 GATATAAAGACATAA GCTTGAA AATT TTCAAGC TTTTTTATCTTGCTA TERM 345 260197 - 260214 + F 100 -8.5 -5.49569 | opp_overlap 260197 GATATAAAGACATAA GCTTGAA AATT TTCAAGC TTTTTTATCTTGCTA SAG0250 260302 - 260883 + | hypothetical protein SAG0251 260886 - 261104 + | Cro/CI family transcriptional regulator TERM 346 261421 - 261408 - f 79 -6.7 -4.62069 | TGTTTACTTTAAAAA GTGCT TGGT AGCAC TCAAAATCCAGTGTC SAG0252 261677 - 262237 + | acetyltransferase TERM 347 262820 - 262808 - g 73 -3.4 -5.17353 | overlap 262811 ATAGGTATGAAAAAA GAAG GCGAG CTTC GTCATCTTGCAAAAA SAG0253 262337 - 262915 + | acetyltransferase SAG0254 262958 - 263638 + | acetyltransferase TERM 348 263827 - 263808 - T 85 -5 -5.68438 | opp_overlap 263808 263796 263810, overlap 263810 GCATCAAAGAAAAAA GTCAAGAT TATT ATCTTGTC TTTTTTTCTATGAGT TERM 349 263808 - 263827 + T 90 -5 -5.72616 | opp_overlap 263808 263810, overlap 263796 263810 GCATCAAAGAAAAAA GTCAAGAT TATT ATCTTGTC TTTTTTTCTATGAGT TERM 350 263810 - 263825 + T 74 -6.2 -4.50122 | opp_overlap 263810 263808, overlap 263808 263796 ATCAAAGAAAAAAGT CAAGAT TATT ATCTTG TCTTTTTTTCTATGA SAG0255 264845 - 263898 - | hypothetical protein SAG0256 265333 - 264842 - | ECF subfamily RNA polymerase sigma factor SAG0257 265617 - 265778 + | putative lipoprotein SAG0258 266521 - 265913 - | TetR family transcriptional regulator TERM 351 266176 - 266189 + g 81 -3.9 -5.47821 | CTTGCATCAATATTT TAATG AGAT CATTA TTTTTTTCAATAAAT SAG0259 267642 - 266545 - | ABC transporter SAG0260 268361 - 267645 - | ABC transporter, ATP-binding protein TERM 352 268386 - 268407 + r 77 -8.1 -3.88062 | overlap 268377 268376 268389 TTGCTCCTCTCTCAG TGAGTGAGT GTTT ACTCACTTA TTTGATATCATATAT TERM 353 268389 - 268404 + r 77 -7.6 -4.05877 | overlap 268377 268376 268386 CTCCTCTCTCAGTGA GTGAGT GTTT ACTCAC TTATTTGATATCATA TERM 354 268571 - 268601 + r 100 -8.4 -5.42131 | opp_overlap 268571 268576, overlap 268576 AAAATGGGCACAGAA TAAAACGACTAAGA ATA TCCTTGTCGTTTTA TTTTTTATATAGTTA TERM 355 268601 - 268571 - R 85 -10.6 -3.51563 | opp_overlap 268571 268576, overlap 268576 AAAATGGGCACAGAA TAAAACGACTAAGA ATA TCCTTGTCGTTTTA TTTTTTATATAGTTA TERM 356 268596 - 268576 - R 80 -6.1 -4.84311 | opp_overlap 268576 268571, overlap 268571 GGGCACAGAATAAAA CGACTAAGA ATA TCCTTGTCG TTTTATTTTTTATAT TERM 357 268576 - 268596 + r 77 -3.9 -5.51612 | opp_overlap 268571 268576, overlap 268571 GGGCACAGAATAAAA CGACTAAGA ATA TCCTTGTCG TTTTATTTTTTATAT SAG0261 269046 - 268657 - | IS1381 transposase protein B SAG0262 269462 - 269079 - | IS1381 transposase protein A SAG0263 270013 - 269498 - | hypothetical protein TERM 358 269660 - 269686 + g 77 -8.2 -3.90328 | opp_overlap 269639 269656 269654 269660, overlap 269681 269682 AATTAGAAATATATA TCGAAAGAAA TATTTCT TTTCTTTCGA TTTATCGAAGTTATA SAG0264 270501 - 270190 - | hypothetical protein TERM 359 271096 - 271086 - g 70 -6.8 -4.14013 | GAAAATGTGTTAAAA GCTG AAG CAGC AGTCAATAAGTTAAC SAG0265 270693 - 271400 + | hypothetical protein TERM 360 271427 - 271411 - f 82 -9.5 -3.67068 | opp_overlap 271411 AGTAAAATCCTGAAA GTCTAGT TTT ACTAGAC TTTTTTGCTATGCTT TERM 361 271411 - 271427 + F 100 -9.5 -5.2422 | opp_overlap 271411 AGTAAAATCCTGAAA GTCTAGT TTT ACTAGAC TTTTTTGCTATGCTT nagA 271678 - 272826 + | N-acetylglucosamine-6-phosphate deacetylase TERM 362 272848 - 272829 - f 82 -9.4 -3.60792 | opp_overlap 272829, overlap 272832 TTGGCAATCTTGAAA GAACTAGT TTTT ACTAGTTC TTTTTAATTTATTAA TERM 363 272829 - 272848 + F 100 -9.4 -5.09521 | opp_overlap 272829 272832 TTGGCAATCTTGAAA GAACTAGT TTTT ACTAGTTC TTTTTAATTTATTAA TERM 364 272878 - 272896 + F 77 -3.2 -5.58179 | opp_overlap 272878 ATTTTTAATGAAATA TAGTTTGA CAA TAAAACTA TTTTTTCTTATAATG TERM 365 273159 - 273179 + G 77 -2.5 -5.51046 | overlap 273162 TTAATTTTGTTAGCG TAATCGGGC TTA GCTTGATGA TTTTTTCTGTGTTTA SAG0267 272945 - 273487 + | hypothetical protein TERM 366 273671 - 273721 + F 82 -6.1 -5.06735 | gap 1, overlap 273687 TAAATTAGGGTGGAA CCGCGTCTTTGACGCCCCTGTGCT GTTG GGCATAGGTG-GTGTAGGACGTGG TTTTTATCATTTGTC TERM 367 274268 - 274284 + G 70 -8.1 -3.32844 | CTTCAAACAGGTCCT GTAACTT CTG AAGTTAC TTATGGACTAGAGCG glyQ 273800 - 274714 + | glycyl-tRNA synthetase subunit alpha TERM 368 275049 - 275059 + G 70 -2.6 -5.07486 | opp_overlap 275049 TAGAGCAAAAACTTA TATT GAT AATA TTTTTATTGCAGGTG SAG0269 274714 - 275355 + | acyl carrier protein phosphodiesterase, putative TERM 369 275479 - 275494 + G 76 -4.8 -5.0538 | GATCATCGTTTATCA TTTGAA ACTG TTCAAA TTTTTTCAACTCCAC TERM 370 277072 - 277059 - g 70 -6.7 -4.08945 | AGCATTGGTGCAAAA GAGCA AGGA TGCTC AATATAAAGTTTCCG glyS 275359 - 277398 + | glycyl-tRNA synthetase subunit beta TERM 371 277428 - 277443 + G 75 -9 -3.53012 | opp_overlap 277428 277427 GATCCTAAAAAAATT GCTCGT ATTA ACGAGC TTTCAAAAAAGAAAA SAG0271 277410 - 277667 + | hypothetical protein TERM 372 277646 - 277660 + F 70 -7.2 -3.75024 | ACTACATGGTCGTAG TTTGGA TGA TCCAAA TTCTTAATGGTGAGA TERM 373 277702 - 277731 + F 88 -6.5 -5.4505 | gap 1 TAAAGTCAACACTTG GGTGGGGCAAAAGA TAA TCTTT-GTCTCGCC TTTTTTATTAGGAAG SAG0272 277756 - 278019 + | hypothetical protein TERM 374 278600 - 278580 - g 78 -11.2 -2.63596 | TTGGATTTTAGACCA CGTTCCTG GAGCA CAGGAACG TGCTGAAAAAGGAGA glpK 278134 - 279642 + | glycerol kinase TERM 375 280650 - 280636 - g 76 -6.4 -4.4572 | overlap 280637 AATATTGTAAACAAA CGCTTC CCA GAAGCA GAGCTTACTATTGAT TERM 376 280984 - 280970 - g 73 -5.7 -4.68593 | CTGATTATCGAAAAA TGGCA GAAGG TGCCA TGGAAACTATTATTA SAG0274 279655 - 281484 + | alpha-glycerophosphate oxidase glpF-1 281496 - 282194 + | glycerol uptake facilitator protein TERM 377 282208 - 282231 + F 100 -8.9 -5.4756 | AAGAGATTTTTGATG CTGAGACCG ACTTTA TGGTCTCAG TTTTTTGTTACCGTT SAG0276 282282 - 283619 + | NADH oxidase, putative TERM 378 284390 - 284400 + G 70 -5.4 -4.4715 | GAAGGAGAAGTTCTG GCAA CTT TTGC TTTTCTACATTCACA SAG0277 283610 - 285040 + | hypothetical protein TERM 379 286672 - 286658 - g 84 -7.8 -4.56702 | CGGTAATGAAACAAA CGCTGC ATG GCAACG AGCTGTATCAGAGAC tkt 285165 - 287150 + | transketolase TERM 380 287160 - 287185 + F 80 -5.5 -5.26918 | gap 1, opp_overlap 287160 CTTTAAGAGCATGAA GAAGTTG-GGAA AGA TACCTCAACTTC TTTTTTGTAAGATAT SAG0279 287363 - 287668 + | hypothetical protein SAG0280 287688 - 288422 + | ABC transporter, ATP-binding protein SAG0281 288426 - 290030 + | hypothetical protein TERM 381 290207 - 290261 + T 100 -10.9 -4.49314 | opp_overlap 290209 290219 290223, overlap 290208 290211 290219 290223 TATTGCTATCTATTA TATCTTATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGCTAAC TTGTTTTTCGTAATA TERM 382 290208 - 290260 + T 100 -14.4 -3.28504 | opp_overlap 290209 290219 290223, overlap 290207 290211 290219 290223 ATTGCTATCTATTAT ATCTTATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGCTAA CTTGTTTTTCGTAAT TERM 383 290259 - 290209 - T 100 -15.7 -2.80816 | opp_overlap 290208 290207 290211 290219 290223, overlap 290219 290223 TTGCTATCTATTATA TCTTATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGCTA ACTTGTTTTTCGTAA TERM 384 290211 - 290257 + T 100 -20.5 -2.80514 | opp_overlap 290209 290219 290223, overlap 290208 290207 290219 290223 GCTATCTATTATATC TTATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGC TAACTTGTTTTTCGT TERM 385 290249 - 290219 - T 100 -17.1 -2.80443 | opp_overlap 290211 290208 290207 290219 290223, overlap 290209 290223 TTATATCTTATCAGA CAAAGAGACTAGG GATAA CCTAGTCTCTTTG TCTGATGCTAACTTG TERM 386 290219 - 290249 + T 100 -17.1 -2.83641 | opp_overlap 290219 290209 290223, overlap 290211 290208 290207 290223 TTATATCTTATCAGA CAAAGAGACTAGG GATAA CCTAGTCTCTTTG TCTGATGCTAACTTG TERM 387 290245 - 290223 - T 100 -12.1 -4.08974 | opp_overlap 290219 290211 290208 290207 290223, overlap 290219 290209 ATCTTATCAGACAAA GAGACTAGG GATAA CCTAGTCTC TTTGTCTGATGCTAA TERM 388 290223 - 290245 + T 100 -12.1 -4.10164 | opp_overlap 290223 290219 290209, overlap 290219 290211 290208 290207 ATCTTATCAGACAAA GAGACTAGG GATAA CCTAGTCTC TTTGTCTGATGCTAA SAG0282 291623 - 290238 - | PTS system, IIBC components TERM 389 290875 - 290861 - G 71 -5 -4.60073 | TAGAGAACGACAAAA TTCCCA TGC TGAGAA ATATTAACATAGGAA proB 291764 - 292567 + | gamma-glutamyl kinase TERM 390 292667 - 292657 - g 75 -5.4 -4.76041 | TACAGCTAGTAAAAA TGAG ATA CTCA GGGACTTAGCGAGAA proA 292577 - 293830 + | gamma-glutamyl phosphate reductase TERM 391 294434 - 294415 - g 71 -5 -4.66535 | AATTTTCAAAACAAA TTGCTCGA AAAA TTGAGCAA GTACGAGCTGAAAAA mraW 293913 - 294860 + | S-adenosyl-methyltransferase MraW SAG0286 294875 - 295201 + | cell division protein FtsL, putative pbpX 295205 - 297463 + | penicillin-binding protein 2X TERM 392 298174 - 298194 + G 74 -8.3 -3.78409 | TTGGTTCACTTGCAT TGGGTGCTA TGT TAGCAGCCA TTTCAATTGCCTTAC mraY 297465 - 298475 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 393 298485 - 298513 + F 74 -6 -4.70353 | CTTTAAACTTTATTA GGGGATGTGGTA TGGAC TGCCAGATTCCC TTTTGCTTTCTTGTA TERM 394 299231 - 299204 - g 87 -11.4 -3.58476 | opp_overlap 299203 299202 299204 299206, overlap 299198 299200 AAATCAAAACAGCAA CAGTTATCGCTG ATAC CATCGATAACTG GCTTTTGTCCACTAA TERM 395 299204 - 299231 + G 80 -11.4 -2.53918 | opp_overlap 299198 299204 299200, overlap 299203 299202 299206 AAATCAAAACAGCAA CAGTTATCGCTG ATAC CATCGATAACTG GCTTTTGTCCACTAA SAG0289 298573 - 299916 + | DEAD-box ATP dependent DNA helicase TERM 396 299927 - 299950 + F 81 -3.9 -5.5353 | TTTAAAATTATTAAA GTCTGAAAT CAGCTC GTTTCAGGC TTTTTTATTGATATA SAG0290 300054 - 300866 + | ABC transporter, substrate-binding protein TERM 397 301608 - 301622 + G 81 -8.6 -4.16251 | ACAAATTATGGGTGG TAGCGA TTA TCGCTA TTTTGAACGTTATAT SAG0291 300961 - 301764 + | amino acid ABC transporter, permease protein SAG0292 301764 - 302507 + | amino acid ABC transporter, ATP-binding protein TERM 398 302528 - 302552 + F 100 -10.9 -5.03201 | opp_overlap 302528 AATATTTTGATATAA TGAAGGTTAGA ATG TCTAATCTTCA TTTTTAATTATTCTT TERM 399 302552 - 302528 - f 76 -8.7 -3.50219 | opp_overlap 302528 AATATTTTGATATAA TGAAGGTTAGA ATG TCTAATCTTCA TTTTTAATTATTCTT SAG0293 302629 - 302853 + | hypothetical protein TERM 400 302983 - 302967 - g 75 -10.1 -2.78384 | CCTGGTGGTATGACA GCAGCGC TTT ACGCTGC ACGTTCAAACCTTAA trxB 302922 - 303836 + | thioredoxin reductase TERM 401 303853 - 303882 + F 74 -3 -5.50723 | gap 1, opp_overlap 303857, overlap 303857 AAATACTAAAAGTAG AAAAGACT-ATCG AAAAA CGATTAGTCTTTC TTTTTATTTTCATGA TERM 402 303857 - 303878 + F 74 -3.8 -5.18409 | gap 1, opp_overlap 303857, overlap 303853 ACTAAAAGTAGAAAA GACT-ATCG AAAAA CGATTAGTC TTTCTTTTTATTTTC SAG0295 303994 - 305454 + | nicotinate phosphoribosyltransferase nadE 305451 - 306272 + | NAD synthetase TERM 403 306298 - 306279 - f 100 -9.4 -5.38549 | opp_overlap 306279 TGGAAATAAGAAAAA TAGCTAGA ATAT TCTAGCTA TTTTTGTTTCTCTAA TERM 404 306279 - 306298 + F 100 -9.4 -5.42975 | opp_overlap 306279 TGGAAATAAGAAAAA TAGCTAGA ATAT TCTAGCTA TTTTTGTTTCTCTAA pepC 306385 - 307719 + | aminopeptidase C TERM 405 307771 - 307732 - T 100 -13.4 -2.85437 | gap 1, opp_overlap 307744 307770, overlap 307744 TAGTAATAGTAATTA TAAATTAAAAAACTGGATA ATA TATCCAGTTTTTTAATT-A CCGTTAGGTACTGTA TERM 406 307760 - 307744 - T 100 -9.5 -5.42514 | opp_overlap 307744, overlap 307732 TTATAAATTAAAAAA CTGGATA ATA TATCCAG TTTTTTAATTACCGT TERM 407 307744 - 307760 + T 100 -9.5 -5.27477 | opp_overlap 307744 307732 TTATAAATTAAAAAA CTGGATA ATA TATCCAG TTTTTTAATTACCGT pbp1A 310017 - 307765 - | penicillin-binding protein 1A TERM 408 308379 - 308399 + g 73 -6.9 -4.13014 | TAGCTGCTTTAGTAC CAGTACCAA ATG TTAGTACTG TTTTCAGCATATCCG recU 310603 - 310004 - | Holliday junction-specific endonuclease TERM 409 310357 - 310389 + g 70 -8.6 -3.02144 | opp_overlap 310356, overlap 310365 CACCAGAATAATCAG TAGTAGAAGCTTGT CTAAA ATAAGCTTCTACAA TCTTAGCACGACTAC SAG0300 310678 - 311196 + | hypothetical protein SAG0301 311177 - 311299 + | hypothetical protein SAG0302 311317 - 311649 + | hypothetical protein TERM 410 312054 - 312078 + F 100 -11.5 -4.7173 | opp_overlap 312067, overlap 312055 TTGCATAATAGGTTA GTGGCTGAGAT AAC ATCTCAGCCAA TTTTTAACTGTGATG TERM 411 312055 - 312077 + F 100 -15 -3.42315 | opp_overlap 312067, overlap 312054 TGCATAATAGGTTAG TGGCTGAGAT AAC ATCTCAGCCA ATTTTTAACTGTGAT TERM 412 312648 - 312638 - g 80 -6.8 -4.83615 | TACCGTGCAGAAAAA GGTG GTG CACC AATTAAAGAAAACAT TERM 413 313135 - 313125 - g 73 -5.4 -4.56597 | opp_overlap 313125 TTGCGCCTTTAAAAA CTTG GAG CAAG TTTATCCTAACTAGT TERM 414 313208 - 313196 - g 74 -2.7 -5.27923 | overlap 313197 CAAGCTGATAAAAAA CGTAA GCT TTACA ATGGTACTTTAAAAG SAG0303 312119 - 313273 + | hypothetical protein SAG0304 313286 - 314749 + | hypothetical protein TERM 415 314779 - 314817 + T 100 -9 -5.47159 | opp_overlap 314789 CCAGTTTTTTGTCTA CACCCTAAAAGTTAGA AAATCAG TCTAACGATTAGGGTG TTTTTTGTATTCGCA TERM 416 314911 - 314879 - T 100 -11.5 -4.78661 | opp_overlap 314879 AGGGAAAAATTAAAA GGATTTTGCTCTCTA TGA TACAGAACAAAATCC TTTGTTTAAATTAAT TERM 417 314879 - 314911 + T 89 -9.3 -4.50761 | opp_overlap 314879 AGGGAAAAATTAAAA GGATTTTGCTCTCTA TGA TACAGAACAAAATCC TTTGTTTAAATTAAT TERM 418 314929 - 314956 + T 100 -15.8 -5.55001 | opp_overlap 314929 TGTTTAAATTAATAA GTCAACTTTTGG AATT CCAAAAGTTGAC TTTTATTTTTTATTA TERM 419 314956 - 314929 - T 100 -15.8 -3.89354 | opp_overlap 314929 TGTTTAAATTAATAA GTCAACTTTTGG AATT CCAAAAGTTGAC TTTTATTTTTTATTA luxS 315456 - 314974 - | S-ribosylhomocysteinase TERM 420 317197 - 317183 - g 71 -4.2 -4.79075 | opp_overlap 317183, overlap 317185 AAAAATCGAACAAAA CTTGGA TTA TCCAGG TAATATTAAGGTAAC SAG0306 315645 - 317252 + | hypothetical protein TERM 421 317284 - 317253 - f 100 -14.6 -2.78508 | opp_overlap 317254 317259, overlap 317259 GATTTTGCAAAATAG TCAAAAGGAGAGCT TGTT AGCTCTCCTTTTGT TATAGAGTTGACATT TERM 422 317254 - 317283 + F 100 -18.1 -3.36671 | opp_overlap 317253 317259, overlap 317259 ATTTTGCAAAATAGT CAAAAGGAGAGCT TGTT AGCTCTCCTTTTG TTATAGAGTTGACAT TERM 423 317259 - 317278 + F 100 -12.2 -4.78839 | opp_overlap 317253 317259, overlap 317254 GCAAAATAGTCAAAA GGAGAGCT TGTT AGCTCTCC TTTTGTTATAGAGTT TERM 424 317278 - 317259 - f 100 -12.2 -4.35581 | opp_overlap 317259 317254, overlap 317253 GCAAAATAGTCAAAA GGAGAGCT TGTT AGCTCTCC TTTTGTTATAGAGTT SAG0307 317299 - 317400 + | hypothetical protein TERM 425 317782 - 317799 + G 70 -2.7 -5.14698 | GACTTTATCTGGAGG GCAAAAA CGAC TTTTAGC TTTTGTTTTAACTTT SAG0308 317381 - 318277 + | ABC transporter, ATP-binding protein SAG0309 318264 - 319004 + | hypothetical protein TERM 426 319486 - 319476 - g 88 -5.4 -5.61913 | AACAAAGAGAAAAAA TTGC AGA GCAA AATCAGTATATCAAT SAG0310 319001 - 320086 + | hypothetical protein SAG0312 320728 - 321432 + | hypothetical protein TERM 427 321436 - 321457 + F 76 -5.2 -5.08601 | opp_overlap 321436 321440, overlap 321453 TATAAAAAATAATAG GAGACCTT GAAAAA AAGGTTTC TTTTTGTTAAACTAA TERM 428 321453 - 321483 + F 82 -7.8 -4.41348 | opp_overlap 321436, overlap 321436 GACCTTGAAAAAAAG GTTTCTTTTTGTTA AAC TAATGAGAAGAAAC TTTATTTAGGGAGCA gmk 321599 - 322228 + | guanylate kinase SAG0314 322251 - 322565 + | DNA-directed RNA polymerase subunit omega TERM 429 322581 - 322607 + F 93 -10.2 -4.55826 | opp_overlap 322581 GCAAGTCAAAAGTGA GAGGTTGAAACA TTC TGTATCAGCCTC TTTTCATATTTTAGA TERM 430 323178 - 323166 - g 76 -4.9 -5.0432 | overlap 323177 AATAAAAACAGAAAA GATTT ACA AAATC AACAGAACTCTGTTA priA 322639 - 325029 + | primosome assembly protein PriA fmt 325076 - 326011 + | methionyl-tRNA formyltransferase TERM 431 326922 - 326911 - g 70 -3 -5.1764 | CAGATAAGATAAAAA CTAA AAAG TTAG ATGCAAGTAAAGCTC TERM 432 327178 - 327161 - g 73 -5.7 -4.71426 | opp_overlap 327161 327160 TTTTGAGGAAGAAAA TTTTCAA GTTA TTGAAAA ATTCTTAGAAAACCA sun 326001 - 327323 + | sun protein TERM 433 327350 - 327338 - f 74 -7.7 -3.78775 | GTGTCTAGGAGGAAA CTGAC ATC GTCAG AAAAAAATATATGGA SAG0318 327361 - 328098 + | serine/threonine phosphatase, putative TERM 434 328234 - 328211 - g 70 -8.2 -3.32023 | opp_overlap 328210, overlap 328209 TTTAGATAATGAAGA GGTCGCAATA AAAG TATTGCGAAC CAATTATCAAACAGA SAG0319 328098 - 330053 + | serine/threonine protein kinase TERM 435 330056 - 330087 + F 77 -8.3 -3.83026 | opp_overlap 330056 ATTAACTCAATAAAA TTAAAAAGAAGAT GTTAAA GTCTTCTTTTTAA TTTGCTATGGCAGAG TERM 436 330087 - 330056 - f 82 -7.6 -4.72631 | opp_overlap 330056 ATTAACTCAATAAAA TTAAAAAGAAGA TGTTAAAG TCTTCTTTTTAA TTTGCTATGGCAGAG SAG0320 330214 - 330909 + | hypothetical protein SAG0321 330906 - 331925 + | sensor histidine kinase, putative SAG0322 331918 - 332559 + | DNA-binding response regulator TERM 437 333791 - 333772 - g 78 -3.6 -5.28983 | TCCAAAATACAAAAA TTCCTTAT GCGA AAAAGGAA TTAGAGCGAGGTGGT SAG0323 332601 - 334001 + | peptidyl-prolyl cis-trans isomerase SAG0324 333985 - 334359 + | hypothetical protein TERM 438 334395 - 334368 - T 86 -4.2 -5.85425 | opp_overlap 334368 TAAATAAACAAAAAA CCTAGATTTG ATTAATGA CAAGTCTAGG TTTTAAATATTTAAA TERM 439 334368 - 334395 + T 70 -6.4 -4.323 | opp_overlap 334368 TAAATAAACAAAAAA CCTAGATTTG ATTAATGA CAAGTCTAGG TTTTAAATATTTAAA pflA-1 335182 - 334406 - | pyruvate formate-lyase-activating enzyme TERM 440 335543 - 335526 - g 81 -5.5 -5.14819 | AAACTAAAAAAGAAA TTGCTGC CTTA GCTGCAA ATATGGTGTCTGACA SAG0326 335303 - 336058 + | DeoR family transcriptional regulator TERM 441 336728 - 336716 - g 84 -7.7 -4.65916 | TCTAGTTCAAGAAAA CGCTA ATT TAGCG AAAGGAATATTAACT SAG0327 336177 - 337160 + | transcriptional regulator, putative TERM 442 337142 - 337187 + F 100 -15.2 -4.19177 | gap 1, opp_overlap 337146 337148 337154, overlap 337145 337146 337148 337154 CACCTTTGTGGATAC TATATATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATA-ATG TTTCTATTACCAAGT TERM 443 337145 - 337185 + F 100 -17.2 -3.6944 | opp_overlap 337146 337148 337154, overlap 337142 337146 337148 337154 CTTTGTGGATACTAT ATATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATAA TGTTTCTATTACCAA TERM 444 337146 - 337184 + F 100 -20.7 -2.81182 | opp_overlap 337146 337148 337154, overlap 337145 337142 337148 337154 TTTGTGGATACTATA TATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATA ATGTTTCTATTACCA TERM 445 337184 - 337146 - f 100 -20.7 -2.85351 | opp_overlap 337146 337145 337142 337148 337154, overlap 337148 337154 TTTGTGGATACTATA TATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATA ATGTTTCTATTACCA TERM 446 337148 - 337182 + F 100 -18.9 -2.94681 | opp_overlap 337146 337148 337154, overlap 337146 337145 337142 337154 TGTGGATACTATATA TCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGA TAATGTTTCTATTAC TERM 447 337182 - 337148 - f 100 -18.9 -2.97747 | opp_overlap 337148 337146 337145 337142 337154, overlap 337146 337154 TGTGGATACTATATA TCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGA TAATGTTTCTATTAC TERM 448 337154 - 337176 + F 100 -12.1 -4.37067 | opp_overlap 337148 337146 337154, overlap 337148 337146 337145 337142 TACTATATATCAAAA GAGCTAGGA ATAAA TCCTAGCTC TTTTGATAATGTTTC TERM 449 337176 - 337154 - f 100 -12.1 -4.40237 | opp_overlap 337154 337148 337146 337145 337142, overlap 337148 337146 TACTATATATCAAAA GAGCTAGGA ATAAA TCCTAGCTC TTTTGATAATGTTTC celC 337364 - 337687 + | PTS system, cellobiose-specific IIA component SAG0329 337704 - 338024 + | PTS system, cellobiose-specific IIB component TERM 450 338710 - 338723 + G 75 -5.3 -4.82091 | GGCTCACTTTATGGA GCAAT TGGG ATTGC TTTCTTTATTTCATT celB 338026 - 339327 + | PTS system, cellobiose-specific IIC component TERM 451 339341 - 339367 + F 100 -10.2 -4.84359 | opp_overlap 339339 339341 AGCTAGCAGATAAGA GGTTGAGGTGTG TAA TGCACCTTAACC TTTTTCTAAAAATGC TERM 452 339393 - 339380 - f 79 -6.7 -4.56775 | opp_overlap 339379 ACCTTTTTCTAAAAA TGCAC ATTT GTGCA ACTTTAGATGTAGCA pflD-1 339508 - 341964 + | formate acetyltransferase TERM 453 342036 - 342019 - g 81 -2.7 -5.66684 | opp_overlap 342035, overlap 342031 GAAGCTATAAAAAAA TGGCA TCATATAC TGCCA CTAGCAGGTGTAACT SAG0332 341974 - 342642 + | fructose-6-phosphate aldolase gldA 342710 - 343798 + | glycerol dehydrogenase TERM 454 343835 - 343802 - T 88 -6.9 -5.16071 | opp_overlap 343805, overlap 343805 AATCATCAATAAAAA CAATAGAACCAAG TGAAATTG CTTGGTTCTATTT GTCGTTTTAATATTT TERM 455 343832 - 343805 - T 89 -8.6 -4.66002 | opp_overlap 343805, overlap 343802 CATCAATAAAAACAA TAGAACCAAG TGAAATTG CTTGGTTCTA TTTGTCGTTTTAATA TERM 456 343805 - 343832 + T 93 -10 -4.22407 | opp_overlap 343805 343802 CATCAATAAAAACAA TAGAACCAAGTG AAAT TGCTTGGTTCTA TTTGTCGTTTTAATA TERM 457 343931 - 343884 - T 71 -8.2 -3.28122 | gap 1, opp_overlap 343887, overlap 343886 343898 TAGTATTTAAAGAGA TATAAACTAAAAAAGATCAGACA ACA TATCTAATCTTTTTTAGTT-ATC GTTTACTGAAGATTA TERM 458 343929 - 343886 - T 85 -10.8 -3.20029 | gap 1, opp_overlap 343887, overlap 343884 343898 GTATTTAAAGAGATA TAAACTAAAAAAGATCAGACA ACA TATCTAATCTTTTTTAGTT-A TCGTTTACTGAAGAT TERM 459 343918 - 343898 - T 84 -5.5 -5.4387 | opp_overlap 343887, overlap 343886 343884 ATATAAACTAAAAAA GATCAGACA ACA TATCTAATC TTTTTTAGTTATCGT cysK 344876 - 343950 - | cysteine synthase A SAG0335 345611 - 344967 - | hypothetical protein SAG0336 345667 - 346956 + | helicase, putative SAG0337 346956 - 347621 + | competence protein F, putative TERM 460 347680 - 347668 - f 77 -7.7 -4.14193 | ATAAGAGTATAGAAA GCGTT AAC AACGC AAGAAAGAGGTACTC yfiA 347698 - 348252 + | ribosomal subunit interface protein TERM 461 348294 - 348275 - T 84 -6.4 -5.20154 | opp_overlap 348275 ACATAATTTAAAAAA TCTCAGGG TTTT CTCTGAGA TTTTTTTAAAACCTA TERM 462 348275 - 348294 + T 100 -8.6 -5.41143 | opp_overlap 348275 ACATAATTTAAAAAA TCTCAGGG TTTT CTCTGAGA TTTTTTTAAAACCTA TERM 463 348555 - 348539 - T 83 -6.6 -4.86216 | ACAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 464 348569 - 348559 - T 79 -6.8 -4.61868 | overlap 348561 348566 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 465 349590 - 349603 + T 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 466 350692 - 350673 - T 95 -12.2 -3.62096 | opp_overlap 350672 350671 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 467 353589 - 353606 + T 86 -4.1 -5.80364 | opp_overlap 353589, overlap 353591 GAGTAGATAAAGGGA GACTAAC TTTG GTTAGCC TTTTTTTATTGGAAT TERM 468 353725 - 353752 + T 100 -15.8 -4.4458 | opp_overlap 353725 ATGTTCTAAATAAAA TCGTCCTAAGTA AGCT TACTTAGGACGA TTTGTTATCTATCTA TERM 469 353752 - 353725 - T 100 -15.8 -4.87133 | opp_overlap 353725 ATGTTCTAAATAAAA TCGTCCTAAGTA AGCT TACTTAGGACGA TTTGTTATCTATCTA SAG0339 355144 - 353792 - | aspartate kinase SAG0340 355238 - 355888 + | HAD superfamily hydrolase SAG0341 356023 - 355874 - | hypothetical protein TERM 470 355967 - 355985 + g 100 -7.6 -6.01725 | opp_overlap 355964 355965 355970, overlap 355964 AAATACAAAGCATGA TAATTTGA TAA TCAAATTA TTTTTTATTTTTCTT SAG0342 356025 - 356816 + | enoyl-CoA hydratase SAG0343 356912 - 357346 + | MarR family transcriptional regulator TERM 471 357557 - 357567 + G 73 -5.4 -4.57882 | CCGGTTATTCCGCTA GTCA AAT TGAC TTTATTATTGTTGCA fabH 357346 - 358317 + | 3-oxoacyl-(acyl carrier protein) synthase III acpP 358375 - 358599 + | acyl carrier protein TERM 472 358663 - 358700 + F 90 -10.1 -4.03888 | gap 1, opp_overlap 358653 358665 358677 CCAAATCACTTATTA GAGTGAGTATTCAATCAA TCG TTGATCGG-TACTCACTC TTCTTCTTATCAATA fabK 358754 - 359713 + | enoyl-(acyl-carrier-protein) reductase II fabD 359733 - 360659 + | acyl-carrier-protein S-malonyltransferase fabG 360668 - 361402 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 473 361459 - 361445 - g 71 -8.6 -3.18023 | opp_overlap 361451, overlap 361443 CGAGTAGTAGTAACA GGTTAC GGT GTAACC TCACCTATTGGAAAC fabF 361418 - 362650 + | 3-oxoacyl-(acyl carrier protein) synthase II accB 362652 - 363152 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit fabZ 363149 - 363571 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 474 364527 - 364500 - g 78 -9.3 -3.50853 | gap 1, opp_overlap 364503 CGTGTTCAAGTAGAA CACCCTGTTACA GAATT TGTAAC-GGGTG TTGACATCGTTAAAG TERM 475 364503 - 364525 + G 74 -9.2 -3.08015 | opp_overlap 364500 GTTCAAGTAGAACAC CCTGTTACAG AAT TTGTAACGGG TGTTGACATCGTTAA accC 363609 - 364979 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 476 365021 - 365008 - g 75 -5.3 -4.7497 | TTTATTTAGTAAAAA GGATA AATA TATCC GTATTAGTCCAAACA accD 364988 - 365863 + | acetyl-CoA carboxylase subunit beta accA 365856 - 366629 + | acetyl-CoA carboxylase subunit alpha TERM 477 366636 - 366660 + F 77 -8.6 -3.7557 | opp_overlap 366638, overlap 366634 366629 366638 AAATATTAATAGAAA AAGGCTGAGT TATTT ACTCAGCCTA TATTTAGTTTTTCAA TERM 478 366638 - 366658 + F 87 -11.2 -3.44205 | opp_overlap 366638, overlap 366636 366634 366629 ATATTAATAGAAAAA GGCTGAGT TATTT ACTCAGCC TATATTTAGTTTTTC TERM 479 366658 - 366638 - f 100 -11.2 -5.13344 | opp_overlap 366638 366636 366634 366629 ATATTAATAGAAAAA GGCTGAGT TATTT ACTCAGCC TATATTTAGTTTTTC SAG0355 367099 - 367731 + | hypothetical protein TERM 480 367746 - 367765 + T 93 -10.8 -4.14739 | opp_overlap 367746 AGTTCATAGAAAAAA TGAGTTGG TATA CCAACTCA TTTTAGAGTGCCTAA TERM 481 367765 - 367746 - T 100 -10.8 -5.37043 | opp_overlap 367746 AGTTCATAGAAAAAA TGAGTTGG TATA CCAACTCA TTTTAGAGTGCCTAA serS 369054 - 367777 - | seryl-tRNA synthetase TERM 482 368497 - 368465 - G 84 -12.2 -2.90075 | gap 1, opp_overlap 368461, overlap 368468 TCGTGGTTAACCATA TAAGGAGGGAT-CAC TTCA GTGTACCCCTCCTTA GCGTGTTCATCCAGC TERM 483 368494 - 368468 - G 78 -9.5 -3.59946 | gap 1, opp_overlap 368461, overlap 368465 TGGTTAACCATATAA GGAGGGAT-CAC TTCA GTGTACCCCTCC TTAGCGTGTTCATCC TERM 484 369613 - 369624 + G 80 -2.2 -5.61596 | CAAAATTACTGTCTA TCTG GGCA CAGG TTTTTTTCTACACCT TERM 485 369721 - 369749 + G 80 -8.9 -3.94936 | overlap 369713 TTTTCCCTATTGTCA GTGGGCAGTATTG GTA CATTACTGCTTAC TTTGGTCTATTGGTT SAG0357 369420 - 370412 + | hypothetical protein TERM 486 370469 - 370413 - T 90 -12.2 -3.26319 | gap 1, opp_overlap 370413 370429, overlap 370429 AAGTTCCCATATTAA TATTAGAG-TTAAAAAATAAGATAGAC TATA GTCTATCTTATTTTTTAAACTTGAATA TTTTTAAAATGGTCT TERM 487 370413 - 370469 + T 100 -14.4 -4.63928 | gap 1, opp_overlap 370413 370429, overlap 370429 AAGTTCCCATATTAA TATTAGAG-TTAAAAAATAAGATAGAC TATA GTCTATCTTATTTTTTAAACTTGAATA TTTTTAAAATGGTCT TERM 488 370452 - 370429 - T 100 -11.2 -5.13473 | opp_overlap 370413 370429, overlap 370413 ATTAGAGTTAAAAAA TAAGATAGAC TATA GTCTATCTTA TTTTTTAAACTTGAA TERM 489 370429 - 370452 + T 100 -11.2 -5.09426 | opp_overlap 370429 370413, overlap 370413 ATTAGAGTTAAAAAA TAAGATAGAC TATA GTCTATCTTA TTTTTTAAACTTGAA SAG0358 370812 - 370450 - | hypothetical protein TERM 490 370924 - 370892 - R 72 -7.2 -3.95554 | gap 1, opp_overlap 370892 370891 370895, overlap 370895 TTATGTAATAAAATA TAAGAGATGGAATAC TATT GTAA-CCATCTCTTA GTTTTATTACATCAC SAG0359 371842 - 370931 - | PTS system, mannose-specific IID component manM 372669 - 371857 - | PTS system, mannose-specific IIC component TERM 491 372462 - 372422 - G 72 -7.5 -3.75762 | overlap 372420 TTAACCAAAATAATA GCAGCAGCAACAGAGGC AAGTGCA GCGTCTGGTGCTACGGC AGCTCCGATATTTGC manL 373712 - 372702 - | PTS system, mannose-specific IIAB components SAG0362 374827 - 374015 - | HAD superfamily hydrolase SAG0363 374916 - 375500 + | hypothetical protein TERM 492 375495 - 375517 + F 82 -7.8 -4.35926 | opp_overlap 375490 375495 GGAATATTAATGGAA GACTAACC ACAACAG GGTTAGTC TTTTAGGTTTGAAGT SAG0364 375590 - 376201 + | hypothetical protein TERM 493 376224 - 376251 + F 100 -6.4 -5.76949 | opp_overlap 376226 TTTGTTAATATATAT TAGTCGTTCGTA AATA TAAGAACGATTA TTTTTTTTAAAAGTG SAG0365 376304 - 377725 + | xanthine/uracil permease family protein TERM 494 377789 - 377743 - f 89 -10.4 -3.88787 | opp_overlap 377753, overlap 377746 377753 TTATAGTTTGATAAA TAAGATAAAAGGAAATCAGATT TGT AGCCTGGTTTCCTTTTTTCTTA AGAAAAGTGAAGAAA TERM 495 377786 - 377746 - f 77 -7.7 -4.07133 | opp_overlap 377753, overlap 377743 377753 TAGTTTGATAAATAA GATAAAAGGAAATCAGATT TGT AGCCTGGTTTCCTTTTTTC TTAAGAAAAGTGAAG TERM 496 377779 - 377753 - f 70 -4.4 -4.86029 | opp_overlap 377753, overlap 377746 377743 ATAAATAAGATAAAA GGAAATCAGATT TGT AGCCTGGTTTCC TTTTTTCTTAAGAAA TERM 497 377753 - 377779 + F 93 -6.6 -5.4505 | opp_overlap 377746 377743 377753 ATAAATAAGATAAAA GGAAATCAGATT TGT AGCCTGGTTTCC TTTTTTCTTAAGAAA SAG0366 377808 - 378317 + | hypothetical protein SAG0367 378271 - 378831 + | acetyltransferase SAG0368 378840 - 380147 + | hypothetical protein TERM 498 380181 - 380150 - T 78 -6.9 -4.48823 | gap 1, opp_overlap 380150 380159 380180, overlap 380159 AACTAATCCATAAAA TATAAAAAAGAGCA TTATT TGCTCTTT-TTATA TTTAGAGTAGATATT TERM 499 380173 - 380159 - T 90 -5.7 -5.65678 | opp_overlap 380150 380159, overlap 380150 ATAAAATATAAAAAA GAGCA TTATT TGCTC TTTTTATATTTAGAG TERM 500 380159 - 380173 + T 83 -5.7 -5.19879 | opp_overlap 380159 380150, overlap 380150 ATAAAATATAAAAAA GAGCA TTATT TGCTC TTTTTATATTTAGAG SAG0369 380507 - 380211 - | hypothetical protein hit 380923 - 380504 - | HIT family protein TERM 501 381242 - 381224 - H 77 -3.2 -5.67711 | TAAATAAAATAAAAA TGATAATT GAG ATTTATCA TAGAAGGAAAACTAT SAG0371 381259 - 381762 + | hypothetical protein TERM 502 381832 - 381850 + TF 100 -9.6 -5.626 | opp_overlap 381832, overlap 381825 TATTGATACTAAAAA GACACCTT TTT GAGGTGTC TTTTTTTGTCCGATG TERM 503 381850 - 381832 - Tf 93 -8.9 -4.81551 | opp_overlap 381825 381832 TATTGATACTAAAAA GACACCT TTTTG AGGTGTC TTTTTTTGTCCGATG SAG0372 382071 - 381814 - | hypothetical protein SAG0373 382071 - 382796 + | ABC transporter, ATP-binding protein SAG0374 382798 - 383832 + | ABC transporter, permease protein SAG0375 383890 - 384690 + | hypothetical protein trmB 384680 - 385315 + | tRNA (guanine-N(7))-methyltransferase TERM 504 385710 - 385732 + F 95 -12 -3.66727 | opp_overlap 385710 TAAATAATACAGAAA GGGGCGGAGT TTT ACTTCGCCTC TTATGTGTGTGATTC TERM 505 385732 - 385710 - f 80 -7.6 -4.30477 | opp_overlap 385710 TAAATAATACAGAAA GGGGCGGAGT TTT ACTTCGCCTC TTATGTGTGTGATTC SAG0377 385898 - 386281 + | hypothetical protein nusA 386317 - 387468 + | transcription elongation factor NusA SAG0379 387490 - 387786 + | hypothetical protein SAG0380 387779 - 388081 + | hypothetical protein TERM 506 390231 - 390221 - g 73 -6.8 -4.26634 | AAAACAACGCCAAAA CACG CAA CGTG TTAGCCTCGAGAACT infB 388101 - 390884 + | translation initiation factor IF-2 TERM 507 390940 - 390956 + F 75 -8 -3.69354 | opp_overlap 390939 AAATACAAAATTATG GCTAGG CTCGT CCTAGC TTTCAAGTTATGAGC rbfA 390975 - 391343 + | ribosome-binding factor A TERM 508 391402 - 391359 - T 83 -9.4 -3.83758 | gap 1, opp_overlap 391369, overlap 391369 AATCAAGATTAAGAA TAATAAAAAATAAACCATG TCAAAAT CATGGTTTATTTTTTAT-A GCTTTAGAGTTGAGA TERM 509 391369 - 391393 + T 100 -7.3 -5.33866 | opp_overlap 391359 391369 AAGAATAATAAAAAA TAAACCATG TCAAAAT CATGGTTTA TTTTTTATAGCTTTA TERM 510 391393 - 391369 - T 100 -7.3 -5.70522 | opp_overlap 391369, overlap 391359 AAGAATAATAAAAAA TAAACCATG TCAAAAT CATGGTTTA TTTTTTATAGCTTTA SAG0383 392431 - 391427 - | protein of unknown function/lipoprotein, putative SAG0384 392595 - 393011 + | transcriptional repressor CopY TERM 511 394502 - 394482 - g 73 -6.2 -4.52214 | gap 1, opp_overlap 394482, overlap 394476 394485 AAAGCAAAAGAGAAA GAACTTCCC TTAA GGGAAG-TC ATGGCTTTTAAAAAT TERM 512 394500 - 394485 - g 83 -9 -4.32763 | opp_overlap 394482, overlap 394476 394482 GCAAAAGAGAAAGAA CTTCCC TTAA GGGAAG TCATGGCTTTTAAAA SAG0385 393024 - 395258 + | copper-transporter ATPase CopA SAG0386 395299 - 395505 + | copper-transporter protein CopZ SAG0387 395615 - 396229 + | hypothetical protein TERM 513 396312 - 396302 - g 81 -5.4 -5.14626 | ATGATGAAAAGAAAA TTCC AAA GGAA AATATCCAAGCTATT SAG0388 396244 - 397056 + | HAD superfamily hydrolase TERM 514 397079 - 397107 + F 89 -7.6 -4.93877 | opp_overlap 397073 397079 ATAGAATAATAAAGG GAACTTTAAACA CTGTT TGTTTAGGGTTC TTTTGTTTAATAAAC TERM 515 397895 - 397879 - g 100 -9.5 -4.99568 | TAAGATGAAAGAAAA CCTTATC AAT GATAAGG AGCAAGCTTTCTTAT TERM 516 398276 - 398264 - g 70 -2.7 -5.08824 | opp_overlap 398249, overlap 398249 GCTTTATTTAAAAAA GCTTT ATC AAAAC CTATCAAAACTTATG polA 397169 - 399811 + | DNA polymerase I SAG0390 399841 - 400281 + | CoA-binding domain-containing protein SAG0391 400363 - 400842 + | FUR family transcriptional regulator TERM 517 400859 - 400837 - f 74 -2.1 -5.59879 | opp_overlap 400837, overlap 400824 GATAAATATAAAAAA GATTGAA ACGTAATTG TTCAATC TTTTTTTGTTTATAG TERM 518 400837 - 400859 + F 81 -2.1 -6.02919 | gap 1, opp_overlap 400837 400824 GATAAATATAAAAAA GATTGAAACG TAAT TGTT-CAATC TTTTTTTGTTTATAG TERM 519 401846 - 401822 - g 95 -7.3 -5.28481 | TATGGAAGTAAAAAA TTCTCTAAAGA TGG CCTTTAAAGAA AAAGTAGACGTCCCA SAG0392 400995 - 402560 + | cell wall surface anchor family protein TERM 520 402616 - 402656 + F 80 -10.7 -2.71364 | opp_overlap 402623, overlap 402623 ATTGAGGGTTATCGT GGTAAAATAGTGTTATACT AGA GGTATAGCACTATTTTGAC TCATTAGGAGAGTAG TERM 521 402623 - 402649 + F 90 -9.6 -4.23892 | opp_overlap 402623, overlap 402616 GTTATCGTGGTAAAA TAGTGTTATACT AGA GGTATAGCACTA TTTTGACTCATTAGG TERM 522 402649 - 402623 - f 71 -6.7 -4.08767 | opp_overlap 402623 402616 GTTATCGTGGTAAAA TAGTGTTATAC TAGAG GTATAGCACTA TTTTGACTCATTAGG SAG0393 402673 - 403359 + | DNA-binding response regulator TERM 523 403733 - 403722 - g 70 -3 -5.09426 | GTGAACGCGAAAAAA CAAT GATG ATTG CACAACTTTCACATG SAG0394 403361 - 404398 + | sensor histidine kinase TERM 524 404385 - 404430 + T 100 -14.5 -4.03978 | gap 1, opp_overlap 404396, overlap 404396 TCTCTTTAGTACTTA AATTAC-AAAAATAGCTAGGAA TTA TTCCTAGCTATTTTTTGTAATG TTTCTATAAAAGATT TERM 525 404418 - 404396 - T 100 -13.6 -5.04325 | opp_overlap 404385 404396 CTTAAATTACAAAAA TAGCTAGGAA TTA TTCCTAGCTA TTTTTTGTAATGTTT TERM 526 404396 - 404418 + T 100 -13.6 -5.38321 | opp_overlap 404396, overlap 404385 CTTAAATTACAAAAA TAGCTAGGAA TTA TTCCTAGCTA TTTTTTGTAATGTTT SAG0395 405152 - 404412 - | hypothetical protein tgt 405339 - 406481 + | queuine tRNA-ribosyltransferase SAG0397 406591 - 406899 + | hypothetical protein SAG0398 406906 - 407445 + | BioY family protein TERM 527 407504 - 407467 - f 79 -10.1 -2.88999 | opp_overlap 407469, overlap 407479 TTGCTATATATTAGA TGGACTAGTAAATCTAA AAAT TTAGATTTACTAGTCTT TTTTGTGCATAAAAT TERM 528 407469 - 407502 + F 100 -17.1 -5.28176 | opp_overlap 407467 407479 GCTATATATTAGATG GACTAGTAAATCTAA AAAT TTAGATTTACTAGTC TTTTTTGTGCATAAA SAG0399 407584 - 408360 + | AtsA/ElaC family protein SAG0400 408360 - 408866 + | cytidine/deoxycytidylate deaminase family protein SAG0401 408968 - 409102 + | hypothetical protein pgi 409138 - 410487 + | glucose-6-phosphate isomerase TERM 529 410530 - 410498 - f 100 -16.6 -3.32832 | opp_overlap 410498 410505, overlap 410505 TTTAAAAATATCTAA CTAAAAAGTTCCTC AAAGA GAGGAACTTTTTAG TTTTGTTGTAGGATA TERM 530 410498 - 410530 + F 100 -16.6 -4.78237 | opp_overlap 410498 410505, overlap 410505 TTTAAAAATATCTAA CTAAAAAGTTCCTC AAAGA GAGGAACTTTTTAG TTTTGTTGTAGGATA TERM 531 410523 - 410505 - f 93 -8.9 -4.89009 | opp_overlap 410498 410505, overlap 410498 ATATCTAACTAAAAA GTTCCTC AAAGA GAGGAAC TTTTTAGTTTTGTTG TERM 532 410505 - 410523 + F 95 -8.9 -5.17786 | opp_overlap 410505 410498, overlap 410498 ATATCTAACTAAAAA GTTCCTC AAAGA GAGGAAC TTTTTAGTTTTGTTG TERM 533 410580 - 410554 - f 100 -9.4 -4.94972 | TAGGATAACTAAAAA CCCACTAGCACC GGT AGCGATAGTGGG TTGGAAAAAGGGTTG SAG0403 410809 - 411336 + | 5-formyltetrahydrofolate cyclo-ligase family protein SAG0404 411327 - 412004 + | rhomboid family protein SAG0405 412136 - 413179 + | protein of unknown function/lipoprotein, putative TERM 534 413207 - 413265 + T 100 -21.7 -3.88577 | gap 1, opp_overlap 413217 413227, overlap 413209 413214 413227 GGAACAATAAGTTCT T-CGTCAAGTACAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTGTACTTGACTCA TATTTTACTTCTTAG TERM 535 413209 - 413262 + T 100 -30.3 -2.9911 | opp_overlap 413217 413227, overlap 413207 413214 413227 AACAATAAGTTCTTC GTCAAGTACAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTGTACTTGAC TCATATTTTACTTCT TERM 536 413214 - 413257 + T 100 -23 -3.15961 | opp_overlap 413217 413227, overlap 413209 413207 413227 TAAGTTCTTCGTCAA GTACAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTGTAC TTGACTCATATTTTA TERM 537 413254 - 413217 - T 100 -18.9 -2.70932 | opp_overlap 413214 413209 413207 413227, overlap 413227 GTTCTTCGTCAAGTA CAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTG TACTTGACTCATATT TERM 538 413227 - 413244 + T 100 -8.5 -5.59534 | opp_overlap 413227 413217, overlap 413214 413209 413207 AAGTACAATAAAAAA GTTTCCT ATTT AGGAAAC TTTTTTATTGTACTT TERM 539 413244 - 413227 - T 100 -8.5 -5.59534 | opp_overlap 413214 413209 413207 413227, overlap 413217 AAGTACAATAAAAAA GTTTCCT ATTT AGGAAAC TTTTTTATTGTACTT galU 414169 - 413270 - | UTP-glucose-1-phosphate uridylyltransferase TERM 540 413487 - 413497 + g 80 -6.8 -4.84529 | AGTTGAATCTCATTT CCTG CAC CAGG TTTTTGAGTTTCTAA gpsA 415222 - 414206 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase rnpA 415392 - 415721 + | ribonuclease P SAG0409 415734 - 416549 + | SpoIIIJ family protein SAG0410 416557 - 417378 + | R3H domain-containing protein TERM 541 417400 - 417376 - T 87 -8.7 -4.258 | opp_overlap 417382, overlap 417382 GTAGTTACTAAGAAA TAAAAAGAGGT GAG ACCTCTTTTTT TCTTGCGCTCTATCT TERM 542 417394 - 417382 - T 100 -7.7 -5.48514 | opp_overlap 417382, overlap 417376 ACTAAGAAATAAAAA GAGGT GAG ACCTC TTTTTTTCTTGCGCT TERM 543 417382 - 417394 + T 100 -7.7 -5.80364 | opp_overlap 417382 417376 ACTAAGAAATAAAAA GAGGT GAG ACCTC TTTTTTTCTTGCGCT TERM 544 417699 - 417683 - T 83 -6.6 -4.89605 | CAAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 545 417713 - 417703 - T 79 -6.8 -4.61868 | overlap 417705 417710 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 546 418734 - 418747 + T 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 547 419836 - 419817 - T 95 -12.2 -3.62096 | opp_overlap 419816 419815 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 548 422831 - 422816 - T 95 -9 -5.10877 | opp_overlap 422827 ATAAGAAAGTAAAAA CCAAGC AATA GCTTGG GCGCGTAGCTCAGGT TERM 549 423016 - 422997 - T 100 -9.4 -5.03715 | opp_overlap 422997 ACTATTCTTAAAAAA GTAGAAAG TGAT CTTTCTAC TTTTTTTATTTTAAG TERM 550 422997 - 423016 + T 100 -9.4 -6.09196 | opp_overlap 422997 ACTATTCTTAAAAAA GTAGAAAG TGAT CTTTCTAC TTTTTTTATTTTAAG TERM 551 423095 - 423080 - T 91 -7.6 -5.16841 | opp_overlap 423080 TGATATTAATAAAAA CACACT ATTT AGTGTG TTAGTTAGCGCTTTT SAG0411 423633 - 423100 - | hypothetical protein recX 424493 - 423717 - | recombination regulator RecX TERM 552 424804 - 424794 - g 70 -6.8 -4.05905 | opp_overlap 424793 424797 AAAAATCTAAAAATA GGGT AGA ACCC CCTTGTTCTATTTAT SAG0413 424592 - 425947 + | RNA methyltransferase SAG0414 426216 - 426677 + | hypothetical protein SAG0415 426820 - 427248 + | acetyltransferase TERM 553 427315 - 427265 - f 100 -13.7 -3.66378 | opp_overlap 427278, overlap 427268 427272 427278 TACATGCTATTTAAA CTATCAATTAAAAGGTCTCTCAG TATTG CTGAGAGATCTTTTAATTAACAA AAAATTAAAAAATTT TERM 554 427312 - 427268 - f 100 -15.4 -2.94322 | opp_overlap 427278, overlap 427265 427272 427278 ATGCTATTTAAACTA TCAATTAAAAGGTCTCTCAG TATTG CTGAGAGATCTTTTAATTAA CAAAAAATTAAAAAA TERM 555 427308 - 427272 - f 100 -14 -3.33483 | opp_overlap 427278, overlap 427268 427265 427278 TATTTAAACTATCAA TTAAAAGGTCTCTCAG TATTG CTGAGAGATCTTTTAA TTAACAAAAAATTAA TERM 556 427302 - 427278 - f 88 -8.6 -4.47217 | opp_overlap 427278, overlap 427272 427268 427265 AACTATCAATTAAAA GGTCTCTCAG TATTG CTGAGAGATC TTTTAATTAACAAAA TERM 557 427278 - 427302 + F 100 -11.5 -4.4078 | opp_overlap 427278 427272 427268 427265 AACTATCAATTAAAA GGTCTCTCAGT ATT GCTGAGAGATC TTTTAATTAACAAAA TERM 558 427332 - 427320 - f 79 -3.5 -5.5604 | overlap 427328 TTAATTAACAAAAAA TTAAA AAA TTTAA ATTAAAAAATAAAAA TERM 559 427338 - 427328 - f 75 -2.6 -5.59502 | overlap 427320 CAAAAAATTAAAAAA TTTA AAT TAAA AAATAAAAATAAAAT TERM 560 427637 - 427623 - g 74 -4.2 -5.02476 | opp_overlap 427623, overlap 427634 ATACTGTTGAAAAAA CATCTG TAA CAGCTG CTTCTGCTAGTAATA TERM 561 429164 - 429146 - g 72 -8.2 -3.5861 | ACCTATAATAATCAA TACCAAAC AAT GTCTGGTA CAAGTATGGCTTCAC SAG0416 427436 - 431137 + | protease, putative TERM 562 431171 - 431199 + F 100 -11.9 -4.1964 | opp_overlap 431171 GCAATATGATGAAAA GTTCAGTTTAACA TTA TGTTAAGCTGGAC TTTTAGGGTATTGAC TERM 563 431199 - 431171 - f 82 -7.5 -4.35461 | opp_overlap 431171 GCAATATGATGAAAA GTTCAGTTTAACA TTA TGTTAAGCTGGAC TTTTAGGGTATTGAC SAG0417 431347 - 432255 + | glycosyl transferase, group 2 family protein TERM 564 432382 - 432368 - f 82 -8.6 -4.11363 | AATAATATTAAAGAA CAAGGT AGA ACCTTG GCTCGCATTAATTTC TERM 565 432411 - 432430 + F 100 -12.2 -5.79595 | opp_overlap 432411 TCGGGTTTTGGAAAA GGAGTAGC AATC GCTACTCC TTTTTTGTTTTACAC TERM 566 432430 - 432411 - f 100 -12.2 -4.07568 | opp_overlap 432411 TCGGGTTTTGGAAAA GGAGTAGC AATC GCTACTCC TTTTTTGTTTTACAC TERM 567 432474 - 432504 + F 71 -2.9 -5.23765 | gap 1, opp_overlap 432466, overlap 432466 AGGTAAAGCCTTTTT TTATAAAAATTAGG CTTG CTTAATTTTT-TAA TTTTTATATTCTTTA nrdF 432807 - 433817 + | ribonucleotide-diphosphate reductase subunit beta nrdI 433818 - 434231 + | ribonucleotide reductase stimulatory protein nrdE-1 434233 - 436398 + | ribonucleotide-diphosphate reductase subunit alpha TERM 568 436963 - 436949 - g 70 -8.6 -2.97289 | ATCTCAAACATCACA CTTGGT TTT ACCAAG TCATGCAGCAGATGG SAG0421 436461 - 439628 + | hypothetical protein SAG0422 439641 - 440030 + | hypothetical protein TERM 569 440071 - 440023 - T 100 -15 -4.46514 | opp_overlap 440033 440040, overlap 440026 440040 ATGCAGGTAAAGAAA TCACTTAATATAAAAAAGCCTC AAGAA GGGGCTTTTTTATATTAAGCAA TACTAGATTAAGTTT TERM 570 440068 - 440026 - T 100 -16.7 -3.19523 | opp_overlap 440033 440040, overlap 440023 440040 CAGGTAAAGAAATCA CTTAATATAAAAAAGCCTC AAGAA GGGGCTTTTTTATATTAAG CAATACTAGATTAAG TERM 571 440033 - 440061 + T 84 -11.2 -3.03441 | opp_overlap 440026 440023 440040, overlap 440040 AGAAATCACTTAATA TAAAAAAGCCTC AAGAA GGGGCTTTTTTA TATTAAGCAATACTA TERM 572 440054 - 440040 - T 72 -2.7 -5.48063 | opp_overlap 440033 440040, overlap 440026 440023 ACTTAATATAAAAAA GCCTC AAGAA GGGGC TTTTTTATATTAAGC TERM 573 440040 - 440054 + T 82 -4.9 -5.47159 | opp_overlap 440040 440026 440023, overlap 440033 ACTTAATATAAAAAA GCCTC AAGAA GGGGC TTTTTTATATTAAGC SAG0423 440472 - 440074 - | hypothetical protein SAG0424 441028 - 440744 - | hypothetical protein SAG0425 441432 - 441115 - | carboxymuconolactone decarboxylase family protein SAG0426 441851 - 441456 - | hypothetical protein SAG0427 442250 - 441861 - | MerR family transcriptional regulator SAG0428 443303 - 442266 - | alcohol dehydrogenase, zinc-containing SAG0429 444267 - 443413 - | aldo/keto reductase family oxidoreductase TERM 574 444340 - 444355 + r 72 -3.3 -5.243 | opp_overlap 444340 AAGTCAAGGAAAAAA CTAAC ACTCAG GTTAG TTTTTTAATGGTTTG TERM 575 444355 - 444340 - R 72 -3.3 -5.29385 | opp_overlap 444340 AAGTCAAGGAAAAAA CTAAC ACTCAG GTTAG TTTTTTAATGGTTTG SAG0430 445215 - 444352 - | cation efflux system protein TERM 576 445315 - 445304 - H 87 -4.4 -5.72622 | overlap 445309 445310 GCTAGAAACAAAAAA GAAC ACTT GTTC AATACTGAACAAAAC SAG0431 445347 - 445871 + | TetR family transcriptional regulator SAG0432 447259 - 446066 - | AraC family transcriptional regulator TERM 577 446096 - 446115 + g 100 -7.9 -5.50499 | CTTTTGCTTATATTC TAGTGGG CTAATT CCCACTA TTTTTTTAAATGTCC TERM 578 447498 - 447455 - H 80 -10.6 -2.71924 | overlap 447454 TATTTGTTTTTAAAG CCTATACTTTACTATGTATA GAGC TATACAGAATAAAGTAAAGG AGAATATTATGTTTA TERM 579 447600 - 447613 + G 72 -3.9 -5.03747 | overlap 447583 GGTGCAGCTTCTGTA CTAAT TGGT ATTAG TTTTTTAGGAGGTTT SAG0433 447507 - 451676 + | surface protein Rib TERM 580 451800 - 451838 + F 100 -14.2 -3.315 | opp_overlap 451805, overlap 451780 451805 CGAGTTTAATTCTTG AAAAATCCTATCGAGATT ATT AATTTCGATAGGATTTTG ATTTTGTGTAAGCGT TERM 581 451805 - 451833 + F 100 -14.1 -4.75518 | opp_overlap 451805, overlap 451800 TTAATTCTTGAAAAA TCCTATCGAGATT ATT AATTTCGATAGGA TTTTGATTTTGTGTA TERM 582 451833 - 451805 - f 100 -11.9 -4.59853 | opp_overlap 451800 451805 TTAATTCTTGAAAAA TCCTATCGAGATT ATT AATTTCGATAGGA TTTTGATTTTGTGTA TERM 583 451983 - 452012 + F 82 -7.9 -4.39386 | opp_overlap 451987, overlap 451985 AATGAAGTGTATCAT TAGAGCCTAAGAT GTTA ATCCTAGGCTCTC TTTTGATGATTTAAA TERM 584 451985 - 452010 + F 89 -10.5 -3.79533 | opp_overlap 451987, overlap 451983 TGAAGTGTATCATTA GAGCCTAAGAT GTTA ATCCTAGGCTC TCTTTTGATGATTTA TERM 585 452008 - 451987 - f 75 -9.5 -2.83012 | opp_overlap 451985 451983 AAGTGTATCATTAGA GCCTAAGAT GTTA ATCCTAGGC TCTCTTTTGATGATT TERM 586 452306 - 452320 + F 83 -4.3 -5.67283 | AGAGCCTCTTCATTG GGAAA GACGA TTTCC TTTTTTGTTTGCGTT TERM 587 452557 - 452541 - g 84 -5.1 -5.26158 | opp_overlap 452549 GAAATAAAAAATAAA TCATCTG TTT CTGATGA AGAATTTCAAAATTT SAG0435 452388 - 452681 + | DNA-damage-inducible protein J, putative SAG0436 452678 - 452866 + | hypothetical protein SAG0437 453019 - 453390 + | putative lipoprotein TERM 588 453389 - 453414 + F 93 -4.8 -5.95539 | opp_overlap 453392, overlap 453392 TAAGAGATAAAGAAT AAAGTTAGGA CTATTT TCCTAACTTA TTTTTTTATTTAAAA TERM 589 453411 - 453392 - f 76 -6.5 -4.65458 | opp_overlap 453392 453389 GAGATAAAGAATAAA GTTAGGA CTATTT TCCTAAC TTATTTTTTTATTTA TERM 590 453392 - 453411 + F 82 -6.5 -5.01858 | opp_overlap 453392, overlap 453389 GAGATAAAGAATAAA GTTAGGA CTATTT TCCTAAC TTATTTTTTTATTTA TERM 591 454462 - 454439 - f 100 -9 -5.44638 | AGAACAAAAATAAAA GAAACCCTAT TATA ATAAGGTTTC ACTCATATATTTTCT SAG0440 455763 - 456017 + | hypothetical protein SAG0441 456126 - 456437 + | hypothetical protein TERM 592 456649 - 456670 + F 100 -13.1 -5.56264 | opp_overlap 456646 GTAACACGAAATTCG TCCCTGTCA GAAT TGACAGGGA TTTTTTGTATTTAGG SAG0442 456705 - 457274 + | acetyltransferase SAG0443 457372 - 457956 + | acetyltransferase SAG0444 457953 - 458519 + | hypothetical protein TERM 593 459571 - 459585 + G 70 -6.4 -4.0942 | overlap 459572 459577 AGAACGAACAGGCGT TGTGGT TGA ACCACG TTTATCTACTCAATG valS 458519 - 461170 + | valyl-tRNA synthetase TERM 594 461174 - 461213 + F 72 -8.8 -3.04864 | opp_overlap 461184, overlap 461184 TTGGTGAGGTAAAAA AATAAAAAAACGCTATCA TAAA TGATGGCGTTTTTTGATA TAATTTGATTATGGA TERM 595 461203 - 461184 - f 100 -6.4 -6.32976 | opp_overlap 461174 461184 AAAAAAATAAAAAAA CGCTATCA TAAA TGATGGCG TTTTTTGATATAATT TERM 596 461184 - 461203 + F 95 -8.6 -5.2422 | opp_overlap 461184, overlap 461174 AAAAAAATAAAAAAA CGCTATCA TAAA TGATGGCG TTTTTTGATATAATT SAG0446 461341 - 462300 + | Gfo/Idh/MocA family oxidoreductase TERM 597 462326 - 462353 + F 84 -3.5 -5.83211 | CTAGCATATTAATAA GGAGTACTAGA TGTTAT TTTAGTAGTCC TTTTTTGTTTTGCTC SAG0447 462461 - 463324 + | magnesium transporter CorA family protein SAG0448 464546 - 463371 - | IS256 family transposase TERM 598 463496 - 463509 + g 78 -5.3 -4.99134 | GGGATTCTTCATTGG GAAAG ACGA CTTTC TTTTTGGTTTGACGT TERM 599 464548 - 464602 + H 77 -4.6 -5.19879 | gap 1 GTAAACTGGGTCATG GGAATAAATCTCTTTCTAGTGAAGT CTCGCA ACTCTACTATACAG-GATTTATTCC TTTTTGTGTTTACAC TERM 600 464721 - 464734 + H 100 -6.7 -5.60993 | TTAGTTTAGTTTTAA GCATG GTAA CATGC TTTTTTTGTACGAAG SAG0449 464852 - 465916 + | hypothetical protein asnA 466030 - 467022 + | asparagine synthetase AsnA TERM 601 467027 - 467052 + T 100 -12.7 -4.1196 | opp_overlap 467027, overlap 467013 ATATATTATAAAAAA TCAGCCAAGCA GTTT TGTTTGGCTGA TTTTAACAATAAGTT TERM 602 467052 - 467027 - T 100 -10.5 -5.35459 | opp_overlap 467013 467027 ATATATTATAAAAAA TCAGCCAAGCA GTTT TGTTTGGCTGA TTTTAACAATAAGTT SAG0451 467516 - 467067 - | hypothetical protein SAG0452 467646 - 468185 + | type II DNA modification methyltransferase, putative SAG0453 468197 - 468487 + | hypothetical protein TERM 603 468903 - 468917 + G 91 -10 -4.63218 | ATTGATACATTTTAA GGCTTC TGT GAAGCC TTTTGTTCCAAAGAG coaD 468484 - 468969 + | phosphopantetheine adenylyltransferase SAG0455 468959 - 470032 + | hypothetical protein TERM 604 470379 - 470365 - f 95 -8.6 -5.08824 | GGTTTATCCAAAAAA GACTTG GAC CAAGTC TACAAAGATTCAGAT TERM 605 471075 - 471057 - f 79 -6.8 -4.62783 | opp_overlap 471062 CAGCCATTTGAAAAA GACTTTTC GAG GAAAAATC TCCACGAATCATTAC SAG0457 471508 - 472086 + | hypothetical protein TERM 606 472115 - 472091 - f 78 -5.7 -4.86216 | AGAAAAAATAAGAAA GGGATAAACTG TAA CCGTTTATTCC ACCATGAAGAAAGAA SAG0458 472137 - 473243 + | hypothetical protein SAG0459 473243 - 473758 + | VanZF domain-containing protein SAG0460 473937 - 475682 + | ABC transporter, ATP-binding/permease protein TERM 607 477123 - 477109 - g 78 -10 -3.32844 | opp_overlap 477109, overlap 477118 TTTTCGACTGGACAA CGCCAA CTA TTGGCG TTTGCCAGAACTGTG TERM 608 477109 - 477123 + G 80 -10 -3.54129 | opp_overlap 477109 477118 TTTTCGACTGGACAA CGCCAA CTA TTGGCG TTTGCCAGAACTGTG SAG0461 475672 - 477411 + | ABC transporter, ATP-binding/permease protein TERM 609 477762 - 477752 - g 70 -5.4 -4.53602 | opp_overlap 477748 477746, overlap 477748 TTTATAGGAAAGAAA CCTA TTC TAGG TATCTGTTTGGGGCA trpG 477539 - 478105 + | anthranilate synthase component II TERM 610 478135 - 478175 + T 100 -18.7 -3.52668 | opp_overlap 478140 478145, overlap 478136 478140 478145 GGATAATGACTCTCT ATAAATAAAAGACAGTACC TTA GGTACTGTCTTTTATTTAG TTGTATAGATGAGTT TERM 611 478136 - 478174 + T 100 -22.2 -2.71119 | opp_overlap 478140 478145, overlap 478135 478140 478145 GATAATGACTCTCTA TAAATAAAAGACAGTACC TTA GGTACTGTCTTTTATTTA GTTGTATAGATGAGT TERM 612 478170 - 478140 - T 100 -18.6 -3.87075 | opp_overlap 478136 478135 478140 478145, overlap 478145 ATGACTCTCTATAAA TAAAAGACAGTACC TTA GGTACTGTCTTTTA TTTAGTTGTATAGAT TERM 613 478140 - 478170 + T 100 -18.6 -4.04576 | opp_overlap 478140 478145, overlap 478136 478135 478145 ATGACTCTCTATAAA TAAAAGACAGTACC TTA GGTACTGTCTTTTA TTTAGTTGTATAGAT TERM 614 478145 - 478165 + T 100 -14.1 -5.02357 | opp_overlap 478145 478140, overlap 478140 478136 478135 TCTCTATAAATAAAA GACAGTACC TTA GGTACTGTC TTTTATTTAGTTGTA TERM 615 478165 - 478145 - T 100 -14.1 -4.99043 | opp_overlap 478140 478136 478135 478145, overlap 478140 TCTCTATAAATAAAA GACAGTACC TTA GGTACTGTC TTTTATTTAGTTGTA SAG0463 478711 - 478172 - | BioY family protein TERM 616 478548 - 478537 - G 71 -4.4 -4.78753 | CTAAGAGCAAGAAAA TAGC CACA GCTA GGAAACCCTTCCTAC bioB 479704 - 478712 - | biotin synthetase TERM 617 478825 - 478815 - G 78 -5.4 -5.03145 | TAATTTCCCAAAAAA GTTG AGT CAAC AAGTAAGGTGACTAA TERM 618 479046 - 479064 + g 73 -9.6 -2.89564 | opp_overlap 479040 479045 AGTCTGAAAGCTAAT GTGATGAG CCC CTCATCGC TCTCTCCCATACCAC TERM 619 479786 - 479745 - H 85 -4.7 -5.70829 | gap 1, overlap 479746 AATAGCATAAAAAAA CTATATTGTAAACTTA-GTC GAT GTCATAAGTTAACAATATAA AAATTATGATATACT SAG0465 479828 - 480322 + | hypothetical protein TERM 620 480597 - 480610 + G 73 -2.4 -5.35354 | TGCAGTGTGCTTCAT CAAG TTCTGC CTTG TTTTTTGGTTATCTA TERM 621 481375 - 481360 - g 78 -4 -5.30339 | ATTAAAATATAAAAA TAAACC TATG GGTCTA ACTGCCATTGCAGGG SAG0466 480332 - 481447 + | thiolase TERM 622 481716 - 481698 - g 76 -5.2 -4.91511 | AGTCGATTAGAAAAA GAAGTGCA GTA TGCTCCTC AACTAGCTGATTTTG TERM 623 481807 - 481819 + G 73 -6.3 -4.44608 | overlap 481804 GGTCTGATTTTTTTA GCATT CAG AATGC TTATTTTTCGGTCAC SAG0467 481440 - 482669 + | AMP-binding domain-containing protein nth 482782 - 483414 + | endonuclease III SAG0469 483810 - 483415 - | type IV prepilin peptidase-related protein TERM 624 483466 - 483482 + g 91 -4.4 -5.85011 | opp_overlap 483466 AGCGATACTTAAAAA CGGTAG AAAAG CTATCG TTTTTTTCATTTTTC SAG0470 483965 - 484174 + | hypothetical protein glk 484171 - 485139 + | glucokinase SAG0472 485151 - 485531 + | rhodanese-like domain-containing protein TERM 625 485568 - 485540 - f 80 -9.7 -3.40022 | opp_overlap 485539 485538 485540 485543, overlap 485543 TAAGTAATATACTAA GGAGAGAGTTACT ATT AATAACTCTCTTC ACTTTTTGTAGAAAT TERM 626 485540 - 485568 + F 74 -9.7 -2.69598 | opp_overlap 485540 485543, overlap 485539 485538 485543 TAAGTAATATACTAA GGAGAGAGTTACT ATT AATAACTCTCTTC ACTTTTTGTAGAAAT TERM 627 485543 - 485565 + F 71 -7.8 -3.49077 | opp_overlap 485543 485540, overlap 485540 485539 485538 GTAATATACTAAGGA GAGAGTTACT ATT AATAACTCTC TTCACTTTTTGTAGA TERM 628 485565 - 485543 - f 79 -10 -2.84803 | opp_overlap 485540 485539 485538 485543, overlap 485540 GTAATATACTAAGGA GAGAGTTACT ATT AATAACTCTC TTCACTTTTTGTAGA TERM 629 486712 - 486728 + G 78 -9.5 -3.57144 | TTCAAATGACTTTCT TGGTGAA TAA TTCACCA TTTGCAGGTCGCGAA SAG0473 485763 - 487604 + | elongation factor Tu family protein SAG0474 487649 - 487894 + | hypothetical protein TERM 630 487900 - 487926 + F 100 -9.6 -5.07652 | opp_overlap 487903 GAAGAAATAGCTTAT GAACTTAGGA TTTTGTC TCCTAAGTTC TTTTGTTTTGAGAAA TERM 631 488659 - 488676 + G 70 -2.7 -5.2189 | opp_overlap 488659 ATGGAATATCCAAAA TCAAATG TCTT CATCTGA TTTTTTGGTACTTAA murD 488024 - 489379 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 489382 - 490458 + | N-acetylglucosaminyl transferase SAG0477 490462 - 491598 + | cell division protein DivIB, putative TERM 632 491602 - 491632 + F 83 -10.7 -3.00022 | opp_overlap 491602 491609, overlap 491609 AATGTTAATTAGCAA TAAAAAAGACTGG ATTTA TCAGTCTTTTTTA TATATATCAAGTCAG TERM 633 491632 - 491602 - f 82 -10 -3.28041 | opp_overlap 491602 491609, overlap 491609 AATGTTAATTAGCAA TAAAAAAGACTG GATTTAT CAGTCTTTTTTA TATATATCAAGTCAG TERM 634 491609 - 491625 + F 81 -4.4 -5.4492 | opp_overlap 491602 491609, overlap 491602 ATTAGCAATAAAAAA GACTGG ATTTA TCAGTC TTTTTTATATATATC TERM 635 491625 - 491609 - f 79 -3.7 -5.52023 | opp_overlap 491609 491602, overlap 491602 ATTAGCAATAAAAAA GACTG GATTTAT CAGTC TTTTTTATATATATC ftsA 491954 - 493243 + | cell division protein FtsA ftsZ 493265 - 494545 + | cell division protein FtsZ SAG0480 494551 - 495225 + | ylmE protein, putative ylmF 495237 - 495842 + | hypothetical protein SAG0482 495845 - 496099 + | YGGT family protein ylmH 496101 - 496889 + | ylmH protein SAG0484 496899 - 497669 + | cell division protein DivIVA, putative TERM 636 497869 - 497894 + F 87 -5.5 -5.63517 | AAGGTGGTACCACGA GCTTTCGTC CTTTATGT GATGAAAGC TTTTTTATTTAGCAA TERM 637 499172 - 499159 - g 80 -6.7 -4.72272 | CTGGCGTACGAAAAA GCCAA TCAT TTGGC GTGCGGTTCCACAAT TERM 638 499327 - 499346 + G 74 -3.6 -5.24129 | gap 1 CTCACGTCAACGTGC TTGG-GGTG TTC CACTTCCAA TTTTTTATGCAGAAG TERM 639 499536 - 499518 - g 76 -6 -4.55295 | opp_overlap 499518 499522 TCTTTGAGAAAGAAA CAGACATC ATG GATGTTTG GTTTGATTCTGGTTC TERM 640 500320 - 500304 - g 73 -7.3 -4.02022 | opp_overlap 500304 TTCAATTAGCAGAAA TGCCTGT TGC ACAGACA TTCTCTGGTCAAGAA ileS 497954 - 500746 + | isoleucyl-tRNA synthetase TERM 641 500774 - 500818 + T 81 -8.9 -3.80573 | opp_overlap 500778 500780, overlap 500766 500778 AACGCTATATTTTGA CAAATATCTTACCAGTTTT AATGGAA GAAATTGGTAAGACATTTG TTTAGTAGTCATCAA TERM 642 500833 - 500861 + T 72 -9 -2.73452 | opp_overlap 500838, overlap 500838 GTTTAGTAGTCATCA AAAAAGAAGCCT TGATT AGGCTTCTTTTA ATTATGCTGTTGTTG TERM 643 500838 - 500856 + T 89 -8.9 -4.51777 | opp_overlap 500838, overlap 500833 GTAGTCATCAAAAAA GAAGCCT TGATT AGGCTTC TTTTAATTATGCTGT TERM 644 500856 - 500838 - T 95 -8.9 -5.1675 | opp_overlap 500833 500838 GTAGTCATCAAAAAA GAAGCCT TGATT AGGCTTC TTTTAATTATGCTGT SAG0486 501165 - 500863 - | hypothetical protein SAG0487 501684 - 501229 - | MutT/nudix family protein TERM 645 501577 - 501556 - G 70 -6.5 -4.16842 | opp_overlap 501559, overlap 501557 501560 CCCACCTGGAAGAAA CCAAGCACC ATTA GGTGCCTGT ACTAAAATAATTTTA TERM 646 501576 - 501557 - G 76 -10 -3.09784 | opp_overlap 501559, overlap 501556 501560 CCACCTGGAAGAAAC CAAGCACC ATTA GGTGCCTG TACTAAAATAATTTT TERM 647 501573 - 501560 - G 74 -8.1 -3.68738 | opp_overlap 501559, overlap 501557 501556 CCTGGAAGAAACCAA GCACC ATTA GGTGC CTGTACTAAAATAAT TERM 648 501837 - 501892 + r 76 -3.5 -5.41746 | gap 1, opp_overlap 501855, overlap 501839 501850 501855 AGGCTATTATTTTTT GAGAAGAGTGTGAAAAAAGGTTGAGT TTCTT ACTCAACCTTTTGT-ACTTTCTTCAG TTTTTTTAGAAGATT TERM 649 501839 - 501890 + r 81 -10.5 -2.89655 | gap 1, opp_overlap 501855, overlap 501837 501850 501855 GCTATTATTTTTTGA GAAGAGTGTGAAAAAAGGTTGAGT TTCTT ACTCAACCTTTTGT-ACTTTCTTC AGTTTTTTTAGAAGA TERM 650 501850 - 501880 + r 81 -9.9 -3.13376 | opp_overlap 501855, overlap 501839 501837 501855 TTGAGAAGAGTGTGA AAAAAGGTTGAGT TTCTT ACTCAACCTTTTG TACTTTCTTCAGTTT TERM 651 501875 - 501855 - R 100 -9.8 -5.04987 | opp_overlap 501855 501850 501839 501837 AAGAGTGTGAAAAAA GGTTGAGT TTCTT ACTCAACC TTTTGTACTTTCTTC TERM 652 501855 - 501875 + r 93 -9.8 -4.67256 | opp_overlap 501855, overlap 501850 501839 501837 AAGAGTGTGAAAAAA GGTTGAGT TTCTT ACTCAACC TTTTGTACTTTCTTC SAG0488 504131 - 501870 - | ATP-dependent Clp protease, ATP-binding subunit SAG0489 504287 - 504391 + | hypothetical protein SAG0490 504429 - 504659 + | hypothetical protein TERM 653 504671 - 504683 + F 100 -7.7 -6.06529 | opp_overlap 504671 504666 CTGATAATTATAAAA GACCT TGA AGGTC TTTTTTTTATATCTA TERM 654 504683 - 504671 - f 82 -7.7 -4.58466 | opp_overlap 504671, overlap 504666 CTGATAATTATAAAA GACCT TGA AGGTC TTTTTTTTATATCTA TERM 655 504871 - 504882 + G 86 -4.4 -5.76949 | TAACCATTATGATTT CAAC ATGT GTTG TTTTTTTTGGAACTA SAG0491 504801 - 505493 + | amino acid ABC transporter, permease protein SAG0492 505486 - 506220 + | amino acid ABC transporter, ATP-binding protein TERM 656 506228 - 506250 + F 100 -12.2 -4.91987 | TATTATAATTTCATT GTCTAAAACA ACT TGTTTTAGAC TTTTATTATTCCATT SAG0493 506507 - 508201 + | phosphoglucomutase/phosphomannomutase family protein TERM 657 508211 - 508241 + F 71 -8.4 -3.25539 | opp_overlap 508216, overlap 508216 AAATAAGTCATATGT AAAAAGGCGATGAG GGA TTCATTGCCTTTTC TATTGATTAAAATTG TERM 658 508216 - 508236 + F 85 -8.3 -4.73864 | opp_overlap 508216, overlap 508211 AGTCATATGTAAAAA GGCGATGAG GGA TTCATTGCC TTTTCTATTGATTAA TERM 659 508236 - 508216 - f 71 -5.4 -4.71061 | opp_overlap 508216 508211 AGTCATATGTAAAAA GGCGATGA GGGAT TCATTGCC TTTTCTATTGATTAA folD 508340 - 509194 + | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase SAG0495 509191 - 510027 + | hypothetical protein TERM 660 510040 - 510060 + F 79 -6.9 -4.61873 | opp_overlap 510040 TAAAAAATAAGTAGA GAGGTGTTA GCA TGACACTTC TTTTGCTTTATCGAG TERM 661 511173 - 511163 - g 75 -5.4 -4.73094 | opp_overlap 511163 AACAGTAAGACAAAA GCAA GGT TTGC TTCATCAAAAACTGC xseA 510153 - 511493 + | exodeoxyribonuclease VII large subunit xseB 511471 - 511686 + | exodeoxyribonuclease VII small subunit SAG0498 511686 - 512558 + | geranyltranstransferase, putative SAG0499 512551 - 513378 + | hemolysin A SAG0500 513365 - 513838 + | arginine repressor ArgR, putative recN 513850 - 515508 + | DNA repair protein RecN TERM 662 515814 - 515825 + G 76 -5.8 -4.58685 | opp_overlap 515805 515813 CAAAAACAAGTCAAC CACC TGTA GGTG TTTTTGCAGAAATTT TERM 663 516368 - 516356 - g 70 -3.4 -4.98522 | AACTTTAGAGAAAAA CTAG CTGTT CTAG GTGCTCCTATATCCG SAG0502 515621 - 516457 + | DegV family protein SAG0503 516450 - 517289 + | lipase/acylhydrolase TERM 664 517442 - 517423 - gf 83 -8 -4.27117 | GGGGTACAAGATAAA GTAAAAGT AGGT ACTTTTAC GACCAATAAGTCGCA SAG0504 517264 - 517866 + | hypothetical protein TERM 665 518012 - 517999 - g 73 -6.7 -4.19953 | GATTTAATTGCAAAA GTAGC AGAA GCTAC AGAATTAACTAAAAA hup 517969 - 518244 + | DNA-binding protein HU TERM 666 518256 - 518296 + F 88 -6.4 -5.37043 | gap 1, opp_overlap 518259, overlap 518259 ATAATTCGTCTAGAA AAACCTTGTC-ATATCAAT GTTT ATTGATAGCGACAAGGTTC TTTTTTATATCCAAT TERM 667 518259 - 518293 + F 90 -8.1 -4.77122 | gap 1, opp_overlap 518259, overlap 518256 ATTCGTCTAGAAAAA CCTTGTC-ATATCAAT GTTT ATTGATAGCGACAAGG TTCTTTTTTATATCC TERM 668 518293 - 518259 - f 100 -10.3 -4.83169 | gap 1, opp_overlap 518259 518256 ATTCGTCTAGAAAAA CCTTGTCA-TATCAAT GTTT ATTGATAGCGACAAGG TTCTTTTTTATATCC SAG0506 518441 - 518638 + | hypothetical protein TERM 669 518677 - 518645 - T 100 -13.7 -3.67622 | opp_overlap 518645 518647 518652, overlap 518647 518652 GATTGGTAAAATCAA TATAAAAGAGCAAAC AAG GTTTGCTCTTTTATT ATTTTTAAAGGTAAT TERM 670 518645 - 518678 + T 100 -12.1 -4.60889 | gap 1, opp_overlap 518645 518647 518652, overlap 518647 518652 GATTGGTAAAATCAA T-ATAAAAGAGCAAAC AAG GTTTGCTCTTTTATTA TTTTTAAAGGTAATT TERM 671 518675 - 518647 - T 100 -16.3 -3.41359 | opp_overlap 518645 518647 518652, overlap 518645 518652 TTGGTAAAATCAATA TAAAAGAGCAAAC AAG GTTTGCTCTTTTA TTATTTTTAAAGGTA TERM 672 518647 - 518675 + T 100 -16.3 -4.41633 | opp_overlap 518647 518645 518652, overlap 518645 518652 TTGGTAAAATCAATA TAAAAGAGCAAAC AAG GTTTGCTCTTTTA TTATTTTTAAAGGTA TERM 673 518652 - 518670 + T 100 -11.8 -5.16681 | opp_overlap 518647 518645 518652, overlap 518647 518645 AAAATCAATATAAAA GAGCAAAC AAG GTTTGCTC TTTTATTATTTTTAA TERM 674 518670 - 518652 - T 100 -11.8 -4.77629 | opp_overlap 518652 518647 518645, overlap 518647 518645 AAAATCAATATAAAA GAGCAAAC AAG GTTTGCTC TTTTATTATTTTTAA pyrDA 519614 - 518682 - | dihydroorotate dehydrogenase 1A TERM 675 519739 - 519714 - R 70 -7.1 -3.61652 | overlap 519716 TCGCTAAATAACGAA CATTATTGTTT GTAT AAACAATAATA GTAAAGAAATAAATG TERM 676 519737 - 519716 - R 71 -7.5 -3.38135 | overlap 519714 GCTAAATAACGAACA TTATTGTTT GTAT AAACAATAA TAGTAAAGAAATAAA TERM 677 519807 - 519768 - R 78 -9.6 -3.29144 | opp_overlap 519779, overlap 519769 519779 TGATGCTTTCTATAA TGCATAAAAAATAAGCTT ATGT AAGCTTATTTTTTATGTT CGGCGTAAGATTTTC TERM 678 519806 - 519769 - R 100 -13.1 -2.57344 | opp_overlap 519779, overlap 519768 519779 GATGCTTTCTATAAT GCATAAAAAATAAGCTT ATGT AAGCTTATTTTTTATGT TCGGCGTAAGATTTT TERM 679 519796 - 519779 - R 100 -7.1 -5.3236 | opp_overlap 519779, overlap 519769 519768 ATAATGCATAAAAAA TAAGCTT ATGT AAGCTTA TTTTTTATGTTCGGC TERM 680 519779 - 519796 + r 100 -7.1 -5.47159 | opp_overlap 519779 519769 519768 ATAATGCATAAAAAA TAAGCTT ATGT AAGCTTA TTTTTTATGTTCGGC fibB 521036 - 519801 - | beta-lactam resistance factor fibA 522266 - 521055 - | beta-lactam resistance factor TERM 681 522002 - 522015 + g 70 -8.1 -3.37053 | opp_overlap 521996 TGCCAAAAGCTTTAA GGTCC TTAA GGACC TTAGTTACAATATCT TERM 682 522157 - 522144 - G 70 -3.1 -5.03314 | opp_overlap 522155 TTCACCGTCAAAAAA GCCAA GTAA TTGAC TACCCCAGTTGTCTT SAG0510 523499 - 522279 - | murM protein, putative TERM 683 522944 - 522956 + g 82 -7.7 -4.39002 | overlap 522942 AAATTTGAACACCGC GATGC TTT GCATC TTTTATCAGACGTTT SAG0511 524311 - 523499 - | HAD superfamily hydrolase TERM 684 523846 - 523860 + g 76 -5.8 -4.62441 | opp_overlap 523846 CAGGTTGATCAATCA TCATTA GTT TAATGA TTTCTTTGTCTCCCA SAG0512 525698 - 524382 - | HD domain-containing protein TERM 685 525623 - 525648 + g 93 -12.1 -3.67792 | opp_overlap 525630, overlap 525626 GAAATTCTTTAGTGT TAATCAAGTCA TATA TGACTTGATTA TTTACATGGATATAA TERM 686 525626 - 525645 + g 83 -9.4 -3.9693 | opp_overlap 525630, overlap 525623 ATTCTTTAGTGTTAA TCAAGTCA TATA TGACTTGA TTATTTACATGGATA SAG0513 525774 - 526160 + | hypothetical protein TERM 687 526441 - 526468 + F 100 -12.2 -5.38054 | opp_overlap 526440 526439 GTTGTCTTAAACAGC GAGACTTGTTTT CATA AAAACAGGTCTC TTTTTGTTTGTGGAG TERM 688 526545 - 526525 - g 77 -2.5 -5.57729 | overlap 526526 AAAGAACAGAAAAAA TCCTTGTTT TAC ACACAAGGT CAAGAAGAGGTTCTA SAG0514 526504 - 529188 + | cation transporter E1-E2 family ATPase TERM 689 529228 - 529206 - T 100 -13.6 -5.626 | opp_overlap 529206 TAGCTGATAAAAAAA CTCACTTAGA ATA TCTAAGTGAG TTTTTTAGCAATCAA TERM 690 529206 - 529228 + T 100 -13.6 -5.03314 | opp_overlap 529206 TAGCTGATAAAAAAA CTCACTTAGA ATA TCTAAGTGAG TTTTTTAGCAATCAA SAG0515 530093 - 529233 - | hypothetical protein TERM 691 530288 - 530278 - g 78 -4 -5.27335 | overlap 530280 CTCTTGAAAGAAAAA TTTC CTC GAAA AGAAGATATCGTAAC TERM 692 531601 - 531584 - g 74 -9.9 -2.70017 | opp_overlap 531557, overlap 531583 531581 TTGAAAGTCAAATAC GTCTAGC ATAT GCTAGAC CAGAGAAACATGATG SAG0516 530245 - 532176 + | fructose-1,6-bisphosphatase, putative SAG0517 532266 - 533390 + | iron-sulfur cluster-binding protein, putative TERM 693 533864 - 533845 - f 72 -7.2 -3.89524 | gap 1, overlap 533849 ATGCTATCTTAGAAA TCCATCCTG GTT CAGGA-GGA ACTGAAGCGCAAGAT ftsE 534576 - 535268 + | cell division ABC transporter, ATP-binding protein FtsE ftsX 535252 - 536181 + | cell division ABC transporter, permease protein FtsX TERM 694 536220 - 536177 - T 100 -15.8 -3.06162 | opp_overlap 536178 536188, overlap 536188 GACGTTACCTTAAGA TTTAATAAAAAGAGATGAAA TCTA TTTCATCTCTTTTTATTAAT TGTAGATATCATGTT TERM 695 536178 - 536219 + T 100 -19.3 -3.40566 | opp_overlap 536177 536188, overlap 536188 ACGTTACCTTAAGAT TTAATAAAAAGAGATGAAA TCTA TTTCATCTCTTTTTATTAA TTGTAGATATCATGT TERM 696 536209 - 536188 - T 100 -10.3 -5.12971 | opp_overlap 536178 536188, overlap 536177 AAGATTTAATAAAAA GAGATGAAA TCTA TTTCATCTC TTTTTATTAATTGTA TERM 697 536188 - 536209 + T 100 -10.3 -5.2204 | opp_overlap 536188 536177, overlap 536178 AAGATTTAATAAAAA GAGATGAAA TCTA TTTCATCTC TTTTTATTAATTGTA SAG0521 536944 - 536234 - | hypothetical protein SAG0522 537639 - 536941 - | metallo-beta-lactamase superfamily protein SAG0523 537807 - 538571 + | acetoin reductase TERM 698 538588 - 538610 + F 100 -15 -5.61913 | opp_overlap 538582 538590 AATGATTAATGCTAA CACTGTGAGT TTC ACTCACAGTG TTTTTTATATTTCTT TERM 699 538608 - 538590 - f 89 -11.8 -3.10464 | opp_overlap 538588, overlap 538582 TGATTAATGCTAACA CTGTGAGT TTC ACTCACAG TGTTTTTTATATTTC SAG0524 538679 - 541186 + | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon aspC 541272 - 542465 + | aspartate aminotransferase asnC 542486 - 543832 + | asparaginyl-tRNA synthetase TERM 700 543825 - 543870 + T 100 -15.1 -3.64162 | opp_overlap 543827 543840, overlap 543827 543840 TGTTACATCGTATCA AACCATAATAAAAAAGCGC TAGCTAGT GCGCTTTTTTATTATGGTC TTTAGAATCGTTGGT TERM 701 543827 - 543868 + T 100 -17.7 -3.39732 | opp_overlap 543827 543840, overlap 543825 543840 TTACATCGTATCAAA CCATAATAAAAAAGCGC TAGCTAGT GCGCTTTTTTATTATGG TCTTTAGAATCGTTG TERM 702 543868 - 543827 - T 100 -17.7 -3.75665 | opp_overlap 543827 543825 543840, overlap 543840 TTACATCGTATCAAA CCATAATAAAAAAGCGC TAGCTAGT GCGCTTTTTTATTATGG TCTTTAGAATCGTTG TERM 703 543855 - 543840 - T 77 -3.2 -5.59534 | opp_overlap 543827 543825 543840, overlap 543827 AACCATAATAAAAAA GCGC TAGCTAGT GCGC TTTTTTATTATGGTC TERM 704 543840 - 543855 + T 77 -3.2 -5.58179 | opp_overlap 543840 543827, overlap 543827 543825 AACCATAATAAAAAA GCGC TAGCTAGT GCGC TTTTTTATTATGGTC SAG0527 544429 - 543872 - | hypothetical protein TERM 705 544367 - 544349 - G 76 -6 -4.60041 | overlap 544351 544362 AGGTAGGCGTAAAAA TAGAGCTA AAT TAGCCCCA ACAAGGTTGATGGCG SAG0528 545409 - 544426 - | inosine-uridine preferring nucleoside hydrolase SAG0529 545558 - 545442 - | hypothetical protein TERM 706 545508 - 545487 - G 100 -9.5 -5.46657 | CATGGCAATAAAAAA GATCTTGGC AGTT ACCAAGATC ACACGAAAAAATGAA TERM 707 545541 - 545520 - G 100 -8.9 -5.23316 | opp_overlap 545519 545524 GATCACACGAAAAAA TGAATTTAG TTTT CTAAATTCA ATCATATTTTCAGTC SAG0530 546068 - 545655 - | OsmC/Ohr family protein SAG0531 546222 - 547112 + | hypothetical protein TERM 708 548030 - 548015 - g 73 -3.2 -5.09245 | overlap 548017 TTAAAATTAGAAAAA GGTGGA GCCT TCCATC ATGGTGACTTCGTTG SAG0532 547109 - 548083 + | hypothetical protein TERM 709 548722 - 548708 - g 71 -8.6 -3.17875 | opp_overlap 548707 AAGAGATTAAAATGA TACGTG AGA CACGTA ATGATATTAATCGTG SAG0533 548080 - 548991 + | hypothetical protein TERM 710 549287 - 549269 - g 71 -4.6 -4.89233 | TATTAACAGTAAAAA TGTAGC GATGAGT GCTACA GAAACTATTACAACG SAG0534 549006 - 550403 + | dipeptidase TERM 711 550408 - 550425 + F 89 -7.7 -5.0538 | opp_overlap 550408 550410 TGGGAGATTAAAAAA CTCGGAA TATT TTCCGGG TTTTTTAAGATAAAA TERM 712 550425 - 550408 - f 80 -5.5 -5.21709 | opp_overlap 550408, overlap 550410 TGGGAGATTAAAAAA CTCGGAA TATT TTCCGGG TTTTTTAAGATAAAA TERM 713 551093 - 551075 - g 70 -2.5 -5.10461 | gap 1, opp_overlap 551055, overlap 551055 TTCATTTAACAAAAA TGCAGATG CTTA CAT-TGCA AAATTAAAAGAGCTT SAG0535 550545 - 552065 + | zinc ABC transporter, zinc-binding adhesion liprotein TERM 714 552098 - 552075 - T 100 -12.6 -4.29325 | opp_overlap 552075 CATTAATATTTAAAA GATGATATCG GATA CGATATCATC TTTTTTTCTTTGTAC TERM 715 552075 - 552098 + T 100 -12.6 -6.02919 | opp_overlap 552075 CATTAATATTTAAAA GATGATATCG GATA CGATATCATC TTTTTTTCTTTGTAC TERM 716 552157 - 552139 - T 100 -11.8 -5.51046 | opp_overlap 552139 CAAACATAGAAAAAA GCACTTCT AAT AGAAGTGC TTTTAAAATTAATGC TERM 717 552139 - 552157 + T 100 -11.8 -4.20696 | opp_overlap 552139 CAAACATAGAAAAAA GCACTTCT AAT AGAAGTGC TTTTAAAATTAATGC rpmE2 552438 - 552178 - | 50S ribosomal protein L31 type B SAG0537 553482 - 552547 - | DHH family protein SAG0538 553748 - 554770 + | adenosine deaminase SAG0539 554829 - 555272 + | flavodoxin SAG0540 555349 - 555624 + | hypothetical protein SAG0541 555617 - 556813 + | voltage-gated chloride channel family protein TERM 718 556848 - 556869 + F 100 -7.3 -5.64304 | opp_overlap 556853, overlap 556850 GAGTTTATCAGTTTG TAGAACGGA ATAT TCCGTTCTC TTTTTTATTCTCTTA TERM 719 556850 - 556867 + F 93 -9.9 -4.42868 | opp_overlap 556853, overlap 556848 GTTTATCAGTTTGTA GAACGGA ATAT TCCGTTC TCTTTTTTATTCTCT SAG0542 557266 - 557649 + | IS1381 transposase protein A SAG0543 557682 - 558071 + | IS1381 transposase protein B TERM 720 558270 - 558255 - g 70 -2.6 -5.24416 | overlap 558268 GAAGGAGAATAAAAA TGAATC CATT AATTCA AAGTTTGACAGAAGG rplS 558254 - 558601 + | 50S ribosomal protein L19 TERM 721 558709 - 558676 - T 78 -9.7 -3.29593 | opp_overlap 558686 558708, overlap 558677 558685 558686 ACTGGACAACCAAGA CGTAAAAAATCTGCC TGTG GGCAGTTTTTTTACT AGGTCCCCTTAGTTC TERM 722 558708 - 558677 - T 100 -13.2 -2.57274 | opp_overlap 558686, overlap 558676 558685 558686 CTGGACAACCAAGAC GTAAAAAATCTGCC TGTG GGCAGTTTTTTTAC TAGGTCCCCTTAGTT TERM 723 558700 - 558685 - T 77 -4.6 -5.1615 | opp_overlap 558686, overlap 558677 558676 558686 CCAAGACGTAAAAAA TCTGCC TGTG GGCAGT TTTTTTACTAGGTCC TERM 724 558699 - 558686 - T 75 -8.1 -3.68606 | opp_overlap 558686, overlap 558685 558677 558676 CAAGACGTAAAAAAT CTGCC TGTG GGCAG TTTTTTTACTAGGTC TERM 725 558686 - 558699 + T 100 -8.1 -5.53991 | opp_overlap 558686 558685 558677 558676 CAAGACGTAAAAAAT CTGCC TGTG GGCAG TTTTTTTACTAGGTC TERM 726 558817 - 558801 - T 74 -6.6 -4.2573 | opp_overlap 558801 TAAATAACGTCAAAA GCCTTT GTATT AAAGGC TTTTTGTTTTATTCC TERM 727 558801 - 558817 + T 100 -7.3 -5.62288 | opp_overlap 558801 TAAATAACGTCAAAA GCCTTTG TAT TAAAGGC TTTTTGTTTTATTCC SAG0545 559905 - 558826 - | prophage LambdaSa1, site-specific recombinase phage integrase family protein TERM 728 559140 - 559154 + g 75 -7.2 -4.29928 | opp_overlap 559139 559140 559142 CGATATCTAAAATAT TATCTG ATA CAGATA TTTTGCGTGTTGATT TERM 729 559812 - 559824 + g 78 -4.1 -5.4111 | overlap 559806 TAGAATTTTTATCTA GTGTC ACA GATAC TTTTTTGTACTTATT TERM 730 559986 - 560023 + r 100 -6.2 -5.8901 | ACTATACTAGAATTT GCCTCACGCTCTCCTT GGACAA AATTTGAGCGTGGGGC TTTTTTATTTTGTCT SAG0546 560231 - 560028 - | hypothetical protein SAG0547 560891 - 560334 - | hypothetical protein SAG0548 561690 - 560893 - | prophage LambdaSa1, repressor protein, putative TERM 731 561336 - 561357 + g 76 -4.5 -5.24796 | gap 1, overlap 561338 TTTGTTCTTCTAATT GTTCGTTAGC GAA GCTAA-GGAC TTTTTCTTGTCTAGG TERM 732 561653 - 561664 + g 77 -3 -5.53079 | ATGCTCAGATTATTG GTAT CTCG ATAC TTTTTTATATATTTT TERM 733 561926 - 561877 - H 77 -4.5 -5.28942 | gap 1, opp_overlap 561886, overlap 561860 TAGGCTAAACAAAAA GCCTAAACACAAAGAAGTCGAGTT GGA AATTCACATTCTTTG-GTTTAAGC TTAGGATTCACTACT TERM 734 561982 - 561965 - H 90 -11.3 -3.41745 | opp_overlap 561980 TGGTGACAATACCAA GAGGGCT AAGA AGCCCTC TCCCCTAACGGGGTA TERM 735 562156 - 562121 - g 88 -5.5 -5.46629 | overlap 562123 AAGATGGCAAAAAAA TAGCAGAAGTTACTT TGACGG AAGCAACCCCTGCTG ATGGATACGTGATTA TERM 736 562154 - 562123 - g 86 -8.1 -4.36089 | overlap 562121 GATGGCAAAAAAATA GCAGAAGTTACTT TGACGG AAGCAACCCCTGC TGATGGATACGTGAT SAG0549 562051 - 562194 + | hypothetical protein SAG0550 562415 - 562191 - | hypothetical protein SAG0551 562474 - 562632 + | hypothetical protein TERM 737 562649 - 562636 - f 100 -8.1 -5.56263 | ATTACAAAATAAAAA CTCCC ATGA GGGAG TAGGAGGAAGGTATG SAG0552 562662 - 562850 + | hypothetical protein SAG0553 563639 - 562833 - | hypothetical protein TERM 738 563361 - 563346 - G 74 -4.8 -4.86731 | opp_overlap 563335 563332 TTCTTCTAAATAAAA TTTAGA TGCT TCTAAA GCCGGTCCAGCTATC SAG0554 563691 - 563882 + | prophage LambdaSa1, Cro/CI family transcriptional regulator SAG0555 563950 - 564699 + | prophage LambdaSa1, antirepressor, putative TERM 739 564775 - 564750 - g 88 -5.5 -5.64421 | AGCGGAAATAAAAAA GAATCTATTGC GGTA ACAGTAGATTC CAAAACGCTAGCCGA SAG0556 564711 - 564854 + | hypothetical protein TERM 740 564956 - 564939 - f 100 -7.7 -5.9218 | TAGATAAGAAAAAAA GTCCGAC GGGA ATCGGAC TCAAAACAAACTTAA SAG0557 565004 - 565234 + | hypothetical protein SAG0558 565372 - 565596 + | hypothetical protein TERM 741 566017 - 565975 - g 76 -3.4 -5.28683 | overlap 565978 565980 565981 ACTAAGAGCAAAAAA TAACAGTGGTGTACAAATGT TGT ACAAATGTACACCAGAGATA GAGATAGAGAAAGAT TERM 742 566014 - 565978 - g 71 -5.1 -4.71318 | overlap 565975 565980 565981 AAGAGCAAAAAATAA CAGTGGTGTACAAATGT TGT ACAAATGTACACCAGAG ATAGAGATAGAGAAA TERM 743 566011 - 565981 - g 76 -9.8 -2.94698 | overlap 565980 565978 565975 AGCAAAAAATAACAG TGGTGTACAAATGT TGT ACAAATGTACACCA GAGATAGAGATAGAG SAG0559 565607 - 566467 + | hypothetical protein SAG0560 566448 - 566681 + | hypothetical protein SAG0561 566678 - 566818 + | hypothetical protein SAG0562 566829 - 567083 + | hypothetical protein SAG0563 567086 - 567247 + | hypothetical protein TERM 744 567453 - 567438 - g 73 -6.2 -4.45259 | AAAGCCGAAAAAGAA GCTTTT TATA AAAAGC AAAAACAAGCGGAAG SAG0564 567249 - 567731 + | hypothetical protein SAG0565 567732 - 568406 + | hypothetical protein ssb-2 568399 - 568815 + | prophage LambdaSa1, single-strand binding protein TERM 745 570164 - 570152 - g 73 -9.1 -3.29325 | opp_overlap 570150, overlap 570150 CGGTTAGAAGGAAGA GGGCA TGA TGCCC ACTTGATACGTTATG TERM 746 570446 - 570422 - g 81 -7.2 -4.59424 | overlap 570435 AAAGGCAAAGTAAAA GATGTTATCC AAACA GGACAACACC TGAACCTTCCTGATG SAG0567 569396 - 570715 + | prophage LambdaSa1, reverse transcriptase/maturase family protein SAG0568 570841 - 571044 + | hypothetical protein SAG0569 571034 - 571510 + | hypothetical protein SAG0570 571500 - 571847 + | hypothetical protein TERM 747 571900 - 571884 - f 76 -9.5 -3.0122 | overlap 571892 AAATAAACGCAGAGA GTATGCA AGC TGCATAC AACGAAAATTATCAA SAG0571 572165 - 572296 + | hypothetical protein SAG0572 572296 - 572712 + | hypothetical protein SAG0573 572709 - 572873 + | hypothetical protein SAG0574 572870 - 573139 + | hypothetical protein SAG0575 573142 - 573474 + | hypothetical protein SAG0576 573557 - 573688 + | hypothetical protein SAG0577 573781 - 574314 + | hypothetical protein SAG0578 574311 - 574577 + | hypothetical protein TERM 748 574922 - 574903 - f 81 -4.2 -5.68489 | GAGAACAATAAAAAA GCCAGCTC ACGT AAGCCAGC TCCAATATATTTGTC SAG0579 574965 - 575393 + | hypothetical protein TERM 749 575965 - 575983 + F 88 -7.4 -5.10208 | CACACGCTTTACTCA GTCATCAC ATT GTGGTGGC TTTTTATTACAATTG TERM 750 576052 - 576036 - f 71 -2.1 -5.36441 | overlap 576037 576038 CGTGCAGATAAAAAA GGTACCC ACC GGGTCGC GTTCGAAAAAAATAA SAG0581 576505 - 576861 + | hypothetical protein TERM 751 576875 - 576900 + G 88 -8.3 -4.60487 | GAACTATATGGGTAT GGGCTATCTTC AGAG GAAGTTAGCTC TTTTTAAGACTGGTG SAG0582 576858 - 578126 + | hypothetical protein SAG0583 578119 - 579339 + | hypothetical protein TERM 752 579504 - 579490 - f 76 -7.2 -4.18367 | overlap 579484 GAGGATATACAGAAA TTTCTG AAT CAGAAA TCAAATCAATTGAAA TERM 753 579531 - 579554 + F 75 -2.4 -5.67063 | gap 1 GAAATCATTTAATAA GCGCTTAGCTA GTG TTGC-AAGTGC TTTTTTTATGCTCGA TERM 754 579993 - 579974 - g 90 -3.6 -5.85011 | opp_overlap 579974 579976 GAAAAAGTAAAAAAA TATCTTGA AATG TCAGGATA TGTTGACGGAGAAGA TERM 755 580372 - 580356 - g 71 -5.1 -4.69664 | TACATGACGTAAAAA GTTGGTA TGT TGCCAAC CCGTCCATGGGATAC SAG0585 579635 - 581050 + | hypothetical protein TERM 756 581058 - 581071 + F 83 -4.5 -5.55664 | opp_overlap 581058 GCTGTTAAAAAACGA CATCC GGAA GGGTG TTTTTTTACTGCTAA SAG0586 581131 - 581595 + | hypothetical protein SAG0587 581598 - 582500 + | prophage LambdaSa1, structural protein, putative SAG0588 582497 - 582712 + | hypothetical protein SAG0589 582726 - 583157 + | hypothetical protein SAG0590 583108 - 583446 + | hypothetical protein TERM 757 583660 - 583648 - g 83 -6.3 -5.20154 | AGATAACTCAAAAAA CAACA CAT TGTTG AAGGCGGTGCGATGA SAG0591 583439 - 583675 + | hypothetical protein TERM 758 583718 - 583728 + G 76 -3.2 -5.42259 | TTAGACGAGCATTTA GATG TGC CGTC TTTTTTTGAACATCA TERM 759 583768 - 583748 - g 78 -6.2 -4.87626 | opp_overlap 583748 TTTGAACATCAAAAA GATGAACC TGCAC GATTCATC ATTTTAGAAAAGACT SAG0592 583676 - 584011 + | hypothetical protein SAG0593 584021 - 584578 + | prophage LambdaSa1, structural protein SAG0594 584578 - 584823 + | hypothetical protein TERM 760 584907 - 584931 + G 81 -2.9 -5.64421 | opp_overlap 584907 ATATATGATTACAAA CAGCTAC CACCTCTAAAA GTAGCTG TTTTTTCTTTAGGCT SAG0595 584838 - 585209 + | hypothetical protein TERM 761 586156 - 586177 + G 90 -8.8 -4.49364 | AACAAGCGGTCCGTC GCTAATGC AATCTG GCATTAGC TTTATTATTAGCTTT TERM 762 587049 - 587061 + G 79 -6.9 -4.39329 | opp_overlap 587049 CAGATAATTACACTA GCGGC AAT GCTGC TTTGTTATCTGCCAT SAG0596 585209 - 587221 + | prophage LambdaSa1, pblA protein, internal deletion TERM 763 587487 - 587527 + G 75 -9.9 -2.82668 | opp_overlap 587494, overlap 587486 GATGTTGATGTTTAG CCACATACCTGGAC-GCTA TTATT TAGCTGTCCAGGT-TGGGG ATTTGAACTTTAAAG TERM 764 587521 - 587494 - g 77 -10.7 -2.91383 | gap 1, opp_overlap 587487 587486 ATGTTTAGCCACATA CCTGGAC-GCTA TTATT TAGCTGTCCAGG TTGGGGATTTGAACT TERM 765 588432 - 588409 - g 85 -3.8 -5.72207 | overlap 588410 588411 588421 CTTAAAGGAAAAAAA TCTCGCAAGA TACA TCTTGCGATG GGGACATGCAGTGAT TERM 766 588431 - 588410 - g 73 -7.3 -4.01698 | overlap 588409 588411 588421 TTAAAGGAAAAAAAT CTCGCAAGA TACA TCTTGCGAT GGGGACATGCAGTGA TERM 767 588430 - 588411 - g 79 -10.8 -2.99392 | overlap 588410 588409 588421 TAAAGGAAAAAAATC TCGCAAGA TACA TCTTGCGA TGGGGACATGCAGTG SAG0597 587215 - 588735 + | prophage LambdaSa1, minor structural protein, putative TERM 768 588751 - 588772 + G 84 -4.3 -5.48825 | ATGTTAACAATTCAT GGACCGGAT TTAA AACCTGTCC TTTTTTTGGATAATG TERM 769 590434 - 590448 + G 75 -7.2 -4.25056 | AAGACCAGAGTTACT GTTTTG GAG CAAAAC TTTGTTGGTCGCATG TERM 770 592046 - 592058 + G 73 -6.3 -4.38129 | opp_overlap 592045 592056, overlap 592056 TCATGGTCGAGCAAG GTGTA ACG TACAC TTTTAGTGCTTATGT SAG0598 588736 - 592860 + | prophage LambdaSa1, N-acetylmuramoyl-L-alanine amidase family protein SAG0599 592871 - 594877 + | prophage LambdaSa1, minor structural protein, putative TERM 771 595179 - 595159 - gf 77 -7.7 -4.08939 | overlap 595161 CAACAGGCACACAAA CACTTATCA ATC TGATAAGTA CGCTTTACGCAAAAG TERM 772 595177 - 595161 - gf 75 -8.1 -3.63092 | overlap 595159 ACAGGCACACAAACA CTTATCA ATC TGATAAG TACGCTTTACGCAAA SAG0600 594903 - 595232 + | hypothetical protein SAG0601 595207 - 595419 + | hypothetical protein SAG0602 595432 - 595734 + | hypothetical protein SAG0603 595736 - 596071 + | hypothetical protein TERM 773 596440 - 596398 - g 85 -11.6 -3.33525 | overlap 596396 TTGATCCAGACAATA TTATTCACTGTAATTATGGT TAT AACTCAATTACAGTGAATAA CCATGATGAAATCTG SAG0604 596073 - 596792 + | prophage LambdaSa1, lysin, putative TERM 774 596849 - 596828 - f 71 -3 -5.14563 | overlap 596832 GTCGGTAGCAAAAAA TTATGGAG GTAAAA CTCCTTAA GATAAGACAAATGCC TERM 775 596860 - 596882 + F 88 -6.8 -5.20333 | opp_overlap 596861 596862, overlap 596862 CTTAAGATAAGACAA ATGCCCTCGC TTT GCGGGGGCTG TTTTTGTTATCAATA TERM 776 596881 - 596861 - f 83 -8.1 -4.34444 | opp_overlap 596860 596862, overlap 596862 TTAAGATAAGACAAA TGCCCTCGC TTT GCGGGGGCT GTTTTTGTTATCAAT TERM 777 596862 - 596880 + F 100 -13.8 -4.22377 | opp_overlap 596862 596861, overlap 596860 TAAGATAAGACAAAT GCCCTCGC TTT GCGGGGGC TGTTTTTGTTATCAA TERM 778 596880 - 596862 - f 88 -11.6 -3.19582 | opp_overlap 596860 596862, overlap 596861 TAAGATAAGACAAAT GCCCTCGC TTT GCGGGGGC TGTTTTTGTTATCAA SAG0605 597125 - 598096 + | hypothetical protein TERM 779 598106 - 598136 + F 83 -4.6 -5.68438 | overlap 598104 AAATAGAAATTTTTA GCAAGAATCGCCTG ATA CTAGCTGTTCTTGC TTTTTTATTTGCTAA SAG0606 598200 - 598400 + | hypothetical protein TERM 780 598408 - 598427 + T 100 -11.4 -5.77988 | opp_overlap 598408 598404 TGAAATAAATATTAA CCGCTCTC TATT GAGGGCGG TTTTTTTGTGTGTCT TERM 781 598427 - 598408 - T 80 -9.2 -3.57662 | opp_overlap 598408, overlap 598404 TGAAATAAATATTAA CCGCTCTC TATT GAGGGCGG TTTTTTTGTGTGTCT SAG0607 598611 - 598441 - | hypothetical protein SAG0608 599028 - 599207 + | hypothetical protein SAG0610 600190 - 600594 + | hypothetical protein TERM 782 601573 - 601529 - T 88 -8.8 -4.45544 | opp_overlap 601537, overlap 601534 CGTTATCAATCAAAA TTAAACAACCTGACTCCT CTAGAATTC AGGAATCAGGTTGCATAA CTTATCTTTTATTAT TERM 783 601568 - 601534 - T 100 -10.9 -4.27062 | opp_overlap 601537, overlap 601529 TCAATCAAAATTAAA CAACCTGACTCCT CTAGAATTC AGGAATCAGGTTG CATAACTTATCTTTT TERM 784 601697 - 601734 + T 84 -5.5 -5.38326 | TTCTTATACTGTCTT GCCTCACGCTCTCCT CGACCAAA AATTGAGCGTGAGGC TTTTTGTTTCATTAA SAG0612 601907 - 601746 - | hypothetical protein vex1 602649 - 603926 + | transmembrane protein Vexp1 vex2 603936 - 604592 + | ABC transporter, ATP-binding protein Vexp2 TERM 785 605127 - 605113 - g 70 -2.8 -5.09685 | GGCAAAAAAAAACAA TCTCAA AGT TGGAGA TAAAATAAAAATAAA vex3 604592 - 605968 + | transmembrane protein Vexp3 TERM 786 605971 - 605996 + F 88 -6.9 -5.1925 | opp_overlap 605971 605972 605973, overlap 605973 TGATAATAATTAAAA TTTTCGGTGAT TTAT ATCACCGAATG TTTTTTGACTTATAA TERM 787 605995 - 605972 - f 71 -8.2 -3.34564 | opp_overlap 605971 605973, overlap 605971 605973 GATAATAATTAAAAT TTTCGGTGAT TTAT ATCACCGAAT GTTTTTTGACTTATA TERM 788 605994 - 605973 - f 87 -11.7 -2.59654 | opp_overlap 605971 605973, overlap 605972 605971 ATAATAATTAAAATT TTCGGTGAT TTAT ATCACCGAA TGTTTTTTGACTTAT TERM 789 605973 - 605994 + F 100 -11.7 -4.21792 | opp_overlap 605973 605972 605971, overlap 605971 ATAATAATTAAAATT TTCGGTGAT TTAT ATCACCGAA TGTTTTTTGACTTAT vncR 606065 - 606718 + | DNA-binding response regulator VncR TERM 790 607969 - 607953 - g 70 -6.7 -4.09503 | opp_overlap 607955 AAATATAGTAAAGAA TATACTT AAT AAGTATA ATATAAAGTATGAAA vncS 606715 - 608034 + | sensor histidine kinase VncS TERM 791 608820 - 608848 + F 100 -11.7 -5.33405 | opp_overlap 608820 AGATAATCACTAAAA CAAGAGTCGCCTG ACA CTAGCGACTCTTG TTTTTATTTGCTAAA TERM 792 608848 - 608820 - f 100 -13.9 -4.38129 | opp_overlap 608820 AGATAATCACTAAAA CAAGAGTCGCCTG ACA CTAGCGACTCTTG TTTTTATTTGCTAAA SAG0619 608911 - 609111 + | hypothetical protein TERM 793 609154 - 609103 - f 95 -8.99999 -5.27335 | gap 1, opp_overlap 609108 609109 609112, overlap 609108 609112 609116 GCTGTCAAAGAAAAA CTGAAG-TAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTATCTTTTT GTCTATCAGAACAGA TERM 794 609148 - 609108 - f 100 -17.9 -3.54768 | opp_overlap 609108 609109 609112, overlap 609103 609112 609116 CAAAGAAAAACTGAA GTAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTAT CTTTTTGTCTATCAG TERM 795 609108 - 609149 + F 100 -15.5 -5.03994 | gap 1, opp_overlap 609108 609103 609112 609116, overlap 609109 609112 CAAAGAAAAACTGAA G-TAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTATC TTTTTGTCTATCAGA TERM 796 609109 - 609147 + F 100 -19.2 -4.14422 | opp_overlap 609108 609103 609112 609116, overlap 609108 609112 AAAGAAAAACTGAAG TAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTA TCTTTTTGTCTATCA TERM 797 609144 - 609112 - f 100 -18.7 -3.47011 | opp_overlap 609109 609108 609112, overlap 609108 609103 609116 GAAAAACTGAAGTAA CAAATAACCGCTCAT TTA ACGAGCGGTTATTTG TTATCTTTTTGTCTA TERM 798 609112 - 609144 + F 100 -16.5 -4.16226 | opp_overlap 609112 609108 609103 609116, overlap 609109 609108 GAAAAACTGAAGTAA CAAATAACCGCTCAT TTA ACGAGCGGTTATTTG TTATCTTTTTGTCTA TERM 799 609140 - 609116 - f 100 -13.7 -4.34223 | opp_overlap 609112 609109 609108, overlap 609112 609108 609103 AACTGAAGTAACAAA TAACCGCTCAT TTA ACGAGCGGTTA TTTGTTATCTTTTTG SAG0620 609153 - 609341 + | hypothetical protein TERM 800 609574 - 609539 - f 100 -10.8 -4.37886 | opp_overlap 609542 609547 609571 609572, overlap 609542 609547 CTAGTGTTGAGAAAA TAACAAAACTTAAATA ATCT TATTTAAGTTTTGTTT AAGGTGAACTTTGTA TERM 801 609571 - 609542 - f 100 -12.5 -4.30995 | opp_overlap 609542 609547, overlap 609539 609547 GTGTTGAGAAAATAA CAAAACTTAAATA ATCT TATTTAAGTTTTG TTTAAGGTGAACTTT TERM 802 609542 - 609571 + F 95 -12.5 -3.61371 | opp_overlap 609542 609539 609547, overlap 609547 GTGTTGAGAAAATAA CAAAACTTAAATA ATCT TATTTAAGTTTTG TTTAAGGTGAACTTT TERM 803 609566 - 609547 - f 88 -6.6 -5.12916 | opp_overlap 609542 609547, overlap 609542 609539 GAGAAAATAACAAAA CTTAAATA ATCT TATTTAAG TTTTGTTTAAGGTGA TERM 804 609547 - 609566 + F 83 -6.6 -4.88918 | opp_overlap 609547 609542 609539, overlap 609542 GAGAAAATAACAAAA CTTAAATA ATCT TATTTAAG TTTTGTTTAAGGTGA TERM 805 609664 - 609689 + F 100 -9.1 -5.4505 | opp_overlap 609662 CAATCTCCTAATATT TGCAACTCATA ATGA TTTGAGTTGCA TTTTTTATTGCAAAA rodA 609766 - 610971 + | rod shape-determining protein RodA, putative TERM 806 611000 - 610980 - f 82 -2.5 -5.9218 | opp_overlap 610980 TATATAACAAAAAAA GGTTGGA AAGATAA TCCAGCC TTTTAATAATCGAAA TERM 807 611540 - 611528 - g 74 -2.7 -5.28942 | TATTTGAAAGAAAAA TACCA AAT TGATA ATTGTTTAGTAATAG SAG0622 611090 - 611650 + | HAD superfamily hydrolase TERM 808 611945 - 611934 - g 91 -5.8 -5.49234 | ATATCCAAGAAAAAA CTGG AAGA CCAG CTGTAGAGACAGTTT TERM 809 612846 - 612824 - g 93 -12 -3.64822 | ATTTTGGCATCTAAA GCCCGTATTG CAG CAAAACGGGC GCGTGAAGTAACACG gyrB 611651 - 613603 + | DNA gyrase subunit B SAG0624 613697 - 615421 + | septation ring formation regulator EzrA TERM 810 615443 - 615426 - f 95 -8.5 -5.00616 | opp_overlap 615426 TTCGTTTCTAAAAAA GAAGAGT TAGT ACTCTTC TTTTTTTAATTGCTA TERM 811 615426 - 615443 + F 100 -8.5 -5.65513 | opp_overlap 615426 TTCGTTTCTAAAAAA GAAGAGT TAGT ACTCTTC TTTTTTTAATTGCTA serB 615515 - 616156 + | phosphoserine phosphatase SerB TERM 812 616179 - 616147 - T 77 -8.6 -3.67296 | opp_overlap 616153, overlap 616153 TATTATTGATGCAAA TGAAAACTAGGCCT TTATT AAGCCTAGTTTTTA GATTAAGGATTTTAA TERM 813 616153 - 616173 + T 74 -5.4 -4.74103 | opp_overlap 616147 616153 TGATGCAAATGAAAA CTAGGCCT TTATT AAGCCTAG TTTTTAGATTAAGGA TERM 814 616173 - 616153 - T 82 -7.6 -4.56914 | opp_overlap 616153, overlap 616147 TGATGCAAATGAAAA CTAGGCCT TTATT AAGCCTAG TTTTTAGATTAAGGA SAG0626 616662 - 616177 - | MutT/nudix family protein SAG0627 617130 - 616675 - | hypothetical protein eno 617328 - 618635 + | phosphopyruvate hydratase TERM 815 618705 - 618661 - T 100 -14.8 -4.21827 | gap 1, opp_overlap 618672, overlap 618663 618672 TTAAACAGTTGAAAA TATA-ATAAAAACCATCTTGC ATAT GCAAGATGGTTTTTATGTACA CATTATAATAATAGA TERM 816 618703 - 618663 - T 100 -15.2 -3.70051 | gap 1, opp_overlap 618672, overlap 618661 618672 AAACAGTTGAAAATA TA-ATAAAAACCATCTTGC ATAT GCAAGATGGTTTTTATGTA CACATTATAATAATA TERM 817 618693 - 618672 - T 100 -13.1 -5.35365 | opp_overlap 618672, overlap 618663 618661 AAAATATAATAAAAA CCATCTTGC ATAT GCAAGATGG TTTTTATGTACACAT TERM 818 618672 - 618693 + T 100 -13.1 -4.9725 | opp_overlap 618672 618663 618661 AAAATATAATAAAAA CCATCTTGC ATAT GCAAGATGG TTTTTATGTACACAT SAG0629 619807 - 618743 - | hypothetical protein TERM 819 618934 - 618946 + g 74 -7.7 -3.97741 | overlap 618933 TTTGAGCTTCAGCAG CAAGC CTT GCTTG TTCTTCTTCCAGTTT TERM 820 619031 - 619042 + g 70 -3 -5.20331 | TTTTTCTTCTTCGTG CTTA GCGA TAAG TTTTCTTTGTTCTTT aroA 620036 - 621319 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroK 621312 - 621824 + | shikimate kinase TERM 821 621969 - 621949 - g 78 -5.5 -5.02074 | CTATCTTTTAAAAAA CATCCATTA TCT TAATGAACG TGAAAAGATGGAATT SAG0632 621881 - 623254 + | psr protein TERM 822 623275 - 623297 + F 91 -7.1 -5.22289 | opp_overlap 623275 TTAATTATGATATAA TAGAGTGAT TTATT GTCACTCTA TTTTTATCTTTAGTG TERM 823 623365 - 623353 - f 72 -4.9 -4.75518 | GATATAAAAGGAAAA TTATG TTA CATAA AAATGATATTATTGA TERM 824 623423 - 623439 + G 70 -3 -5.09762 | overlap 623421 GGGAATGGGTATTGC CAAAGT AGATG GCTTTG TTTTCTTTGTTGAAA SAG0633 623355 - 624710 + | RNA methyltransferase SAG0634 624827 - 625039 + | hypothetical protein aphA 625157 - 625894 + | acid phosphatase/phosphotransferase SAG0636 626215 - 626733 + | hypothetical protein TERM 825 626779 - 626803 + T 76 -3.6 -5.38054 | AAAATGGTTACCAAA GGCGATAG AAGAAAAAA CTATCGTC TTTTTCTTTATAAAG TERM 826 627236 - 627216 - T 74 -6.1 -4.37067 | opp_overlap 627218, overlap 627218 CAAAGATTATTAAAA TAGACTCCC TAA GGAAGTCTT CTTTTGAATTGTAAT TERM 827 627234 - 627218 - T 79 -8.7 -3.77413 | opp_overlap 627218, overlap 627216 AAGATTATTAAAATA GACTCCC TAA GGAAGTC TTCTTTTGAATTGTA TERM 828 627218 - 627234 + T 70 -6.5 -4.27465 | opp_overlap 627218 627216 AAGATTATTAAAATA GACTCCC TAA GGAAGTC TTCTTTTGAATTGTA TERM 829 627903 - 627845 - T 76 -9.4 -3.13073 | gap 2 AGTGTTATCAACAGA TGCATCTCATTCTAATCCTACAGAAT CAGCGGAGC ATGCTGTAGGATTAGAATGAGATG-- CAGCGGTTCCAGTGA SAG0639 628840 - 628019 - | IS5 family transposase orfB TERM 830 628695 - 628710 + g 70 -3.3 -5.04868 | AGAATGACTTTGATA GACTT CACACC AAGTC TTTTGTTTGCTTTGG TERM 831 628855 - 628831 - G 83 -8.6 -4.24204 | opp_overlap 628833 GATTGACACGTAAAA CACGACACAA GGTTG TTGTGGCGTG TTCAAAGCGTAACCG SAG0640 629163 - 628888 - | IS3 family transposase OrfA SAG0642 629519 - 629698 + | hypothetical protein TERM 832 630293 - 630267 - T 78 -5.9 -4.75309 | gap 1, opp_overlap 630267, overlap 630262 TGAAAGGTAACAAAA GAGTCTTC-CGT TTAA ACGAGAAGGCTC TTTTTAGTCGTTTCA TERM 833 630267 - 630293 + T 90 -8.1 -4.84363 | gap 1, opp_overlap 630267 630262 TGAAAGGTAACAAAA GAGTCTTC-CGT TTAA ACGAGAAGGCTC TTTTTAGTCGTTTCA SAG0644 631569 - 630361 - | AraC family transcriptional regulator TERM 834 632905 - 632891 - g 81 -7.2 -4.57073 | overlap 632898 GACCCTTGTTAAAAA TCAAGA TGC TCTTGA TAAAGCTACTGCAAA SAG0645 631950 - 633614 + | cell wall surface anchor family protein TERM 835 633639 - 633621 - f 91 -8.2 -5.02357 | opp_overlap 633620 633621 GATAACTAAATAAAA GGCTACTT CTT AAGTAACC ATGTTTAAGAAAAGA TERM 836 633653 - 633672 + F 93 -8 -5.1286 | opp_overlap 633653 CCATGTTTAAGAAAA GAGAAATA GCCT TATTTCTC TTTTTGTCGTTTTTA TERM 837 633672 - 633653 - f 85 -8 -4.64676 | opp_overlap 633653 CCATGTTTAAGAAAA GAGAAATA GCCT TATTTCTC TTTTTGTCGTTTTTA SAG0646 633703 - 634626 + | cell wall surface anchor family protein TERM 838 634930 - 634895 - g 90 -12 -3.55761 | gap 1, opp_overlap 634894 634897, overlap 634918 TATCCAGCGCTTAAA GACCCCTACTCTGCT GAACAAA AGCAG-GCAGGGGTC GTTGAGTACGCCCGC SAG0647 634628 - 635545 + | sortase family protein SAG0648 635571 - 636353 + | sortase family protein TERM 839 637972 - 637962 - g 75 -5.4 -4.72863 | CGAAACAAATCAAAA CTCA TGG TGAG CCAACAACATTATAC SAG0649 636431 - 639103 + | cell wall surface anchor family protein, putative TERM 840 639815 - 639787 - g 78 -8.9 -3.75292 | opp_overlap 639788, overlap 639788 639790 ACTTATCATTAACAA CGAGAGAGAATCA GCT TGGTTCTCTCTCT TTTTGGATGTTCAAA TERM 841 639788 - 639814 + G 100 -14.6 -4.74706 | opp_overlap 639788 639787 639790 CTTATCATTAACAAC GAGAGAGAATCA GCT TGGTTCTCTCTC TTTTTGGATGTTCAA TERM 842 639814 - 639788 - g 84 -12.4 -2.84693 | opp_overlap 639788, overlap 639787 639790 CTTATCATTAACAAC GAGAGAGAATCA GCT TGGTTCTCTCTC TTTTTGGATGTTCAA TERM 843 639812 - 639790 - g 74 -9.2 -2.96963 | opp_overlap 639788, overlap 639788 639787 TATCATTAACAACGA GAGAGAATCA GCT TGGTTCTCTC TCTTTTTGGATGTTC TERM 844 639866 - 639887 + G 76 -9.5 -3.43328 | gap 1, opp_overlap 639864 AAAATTTTTAAAGTT GCGA-AAGCC AAA GGCTTGTCGC TTGATGTCTTTGATA SAG0650 639378 - 639947 + | sortase family protein TERM 845 640761 - 640743 - g 74 -9.6 -3.09635 | AGGCTGATTACCCAA TGGCTGAT AAT ACCAGCCA TGTGGAGTGCGTAGC SAG0651 640196 - 640801 + | hypothetical protein TERM 846 640963 - 640985 + F 100 -7.8 -5.72207 | AATTTCTGGCATTAC GAGAACATTT TTA GAGTGTTCTC TTTTTTTAGTTTACG SAG0654 642197 - 642301 + | hypothetical protein SAG0655 642734 - 642907 + | hypothetical protein TERM 847 643122 - 643073 - T 100 -16.1 -2.702 | opp_overlap 643080, overlap 643080 643083 AGTATCTCATATAAG CATAAAACGAGGAATCAATCAAA ATTT CTTGATTGATTCCTTGTTTTTTG GCTCTTTGTCAACTG TERM 848 643115 - 643080 - T 100 -12.8 -4.60073 | opp_overlap 643080, overlap 643073 643083 CATATAAGCATAAAA CGAGGAATCAATCAAA ATTT CTTGATTGATTCCTTG TTTTTTGGCTCTTTG TERM 849 643080 - 643115 + T 100 -14.3 -5.18561 | opp_overlap 643073 643080 643083 CATATAAGCATAAAA CGAGGAATCAATCAA AATTTC TTGATTGATTCCTTG TTTTTTGGCTCTTTG TERM 850 643112 - 643083 - T 100 -13.1 -3.22817 | opp_overlap 643080, overlap 643080 643073 ATAAGCATAAAACGA GGAATCAATCAAA ATTT CTTGATTGATTCC TTGTTTTTTGGCTCT TERM 851 643165 - 643189 + T 100 -15.9 -4.87626 | GAAAAATTATATTCT GGAGAAAACCA AAT TGGTTTTCTCC TTTTTGATATTCAAA SAG0656 643389 - 643279 - | hypothetical protein SAG0657 643420 - 643689 + | hypothetical protein SAG0658 643750 - 644901 + | putative lipoprotein TERM 852 644954 - 644903 - f 85 -10.6 -3.56862 | gap 1, opp_overlap 644907 644919, overlap 644908 644919 AGAAACGTCTCTAAA TCACA-TGAATAAAAAAGAAGGCTA AGT TGGCCTTCTTTTTTATTCAATATTA AGCAGTAACACCATC TERM 853 644907 - 644949 + F 100 -17.4 -3.03124 | opp_overlap 644903 644908 644919, overlap 644919 ACGTCTCTAAATCAC ATGAATAAAAAAGAAGGCTA AGT TGGCCTTCTTTTTTATTCAA TATTAAGCAGTAACA TERM 854 644948 - 644908 - f 100 -18.7 -3.00525 | opp_overlap 644907 644919, overlap 644903 644919 CGTCTCTAAATCACA TGAATAAAAAAGAAGGCTA AGT TGGCCTTCTTTTTTATTCA ATATTAAGCAGTAAC TERM 855 644937 - 644919 - f 100 -7.4 -5.5353 | opp_overlap 644907 644919, overlap 644908 644903 CACATGAATAAAAAA GAAGGCTA AGT TGGCCTTC TTTTTTATTCAATAT TERM 856 644919 - 644937 + F 100 -9.6 -5.49234 | opp_overlap 644919 644908 644903, overlap 644907 CACATGAATAAAAAA GAAGGCTA AGT TGGCCTTC TTTTTTATTCAATAT TERM 857 646003 - 645984 - g 72 -7.9 -3.72576 | GTTCTCGCTACCAAA CTGCTGA CATAAT TCAGCAG ACATTAGCAGATTTT SAG0659 645101 - 646093 + | ABC transporter, ATP-binding protein TERM 858 646445 - 646455 + G 73 -5.4 -4.70659 | TGGAGATTGGTTCTA GATG GCT CATC TTTTTAAGTATAGGG SAG0660 646096 - 646914 + | hypothetical protein SAG0661 646916 - 647701 + | hypothetical protein TERM 859 647781 - 647836 + F 81 -10.7 -2.89564 | opp_overlap 647781 GTTAGTGATGATATA CTCCCCTTATAGTGTCTAGTGAA TTTTTGTTTT TTTACTGTCCACTATAAGGGGAG TATATCAGGTGAAGA TERM 860 647953 - 647927 - f 100 -11 -4.88295 | opp_overlap 647927 AAATAAAGTTAAAAA CGCTCTTAGA TGTGCTT TCTAAGAGCG TTTTTTGGTCTATAA TERM 861 647927 - 647953 + F 100 -11 -5.24989 | opp_overlap 647927 AAATAAAGTTAAAAA CGCTCTTAGA TGTGCTT TCTAAGAGCG TTTTTTGGTCTATAA SAG0662 648326 - 648631 + | cylX protein cylD 648631 - 649479 + | cylD protein TERM 862 649583 - 649557 - g 83 -9.6 -3.95653 | overlap 649558 649574 AAAGAAGGTTACAAA GTCATTGCTATT TAT AATAGCAATGAT GCTAAGGCAAGAGCT TERM 863 649582 - 649558 - g 93 -13.1 -2.96307 | overlap 649557 649574 AAGAAGGTTACAAAG TCATTGCTATT TAT AATAGCAATGA TGCTAAGGCAAGAGC cylG 649476 - 650198 + | cylG protein TERM 864 650433 - 650406 - g 71 -7.2 -3.90112 | opp_overlap 650380 TGGTGTTGAACTAAA TGATGATGATAT TTCA ATATTATCATCA GTAAATAGACTAGCA SAG0665 650191 - 650496 + | acyl carrier protein AcpC TERM 865 650922 - 650912 - g 93 -6.8 -5.58179 | GATGAGAATAAAAAA GAGG TTG CCTC AGGAAGGATGTTGGT SAG0666 650480 - 650956 + | cylZ protein cylA 650946 - 651875 + | cylA protein cylB 651868 - 652746 + | cylB protein cylE 652743 - 654746 + | cylE protein cylF 654743 - 655696 + | cylF protein TERM 866 657591 - 657611 + G 75 -6.9 -4.31835 | AGATGTGATGACTAT TTTTGATGC TGC GCTTCAAAA TTTATTATCAGACTT cylI 655693 - 657888 + | cylI protein TERM 867 658001 - 657977 - gf 90 -12.3 -3.26319 | overlap 657980 AATTGTTTATATGAA CAAGGACATGA TAT TCATATCCTTG GAGACAATTATTATC TERM 868 657998 - 657980 - gf 77 -8.2 -3.7732 | overlap 657977 TGTTTATATGAACAA GGACATGA TAT TCATATCC TTGGAGACAATTATT cylJ 657893 - 659104 + | cylJ protein cylK 659073 - 659648 + | cylK protein SAG0674 659991 - 660332 + | hypothetical protein TERM 869 660416 - 660436 + G 73 -6.8 -4.20783 | overlap 660419 TAGGAAAAGTAAAGT GTGCCGCA GCCTA TGCGGTGC TTTATTGGGTACAGT SAG0675 660366 - 660881 + | secreted protein, putative TERM 870 662062 - 662052 - g 88 -5.4 -5.56264 | overlap 662053 TTTAAAGATAAAAAA TCTG GAA CAGA AGTTACAGAAGTCAT SAG0676 660933 - 663590 + | proteinase, putative TERM 871 665208 - 665188 - g 71 -6.9 -3.82923 | opp_overlap 665190, overlap 665186 665190 AAGCCAATGAAAATA CAGCAAAAG TAA CCTTTGCTA ATATTGACTGGTCAC SAG0677 663693 - 666881 + | hypothetical protein TERM 872 666976 - 666945 - f 87 -11.8 -2.73124 | opp_overlap 666950 666971, overlap 666950 TTTTATCTCTTAAAT CAAAAGTAGTAGCT CATT AGCTACTACTTTTT TGTATAAGTGTAAAA TERM 873 666950 - 666971 + F 100 -11.7 -5.38047 | opp_overlap 666950 666945 TCTCTTAAATCAAAA GTAGTAGCT CATT AGCTACTAC TTTTTTGTATAAGTG TERM 874 666971 - 666950 - f 100 -11.7 -4.54727 | opp_overlap 666950, overlap 666945 TCTCTTAAATCAAAA GTAGTAGCT CATT AGCTACTAC TTTTTTGTATAAGTG TERM 875 669518 - 669506 - g 76 -3.5 -5.26875 | CGGTTAAGTAAAAAA TATAA AAT TTATA CAGTAGAACCATTAG TERM 876 669770 - 669756 - g 77 -2.8 -5.4756 | AAGGGGAACAAAAAA CAAAGT ATG ACCCTG AAAGTGCTAAATGGG SAG0679 669128 - 670159 + | hypothetical protein TERM 877 670569 - 670557 - g 73 -3.5 -5.11613 | AGATTAGGGAAAAAA TATAA AAT TTATA CGGTTGAACCGCTCG SAG0680 670194 - 671213 + | hypothetical protein SAG0681 671248 - 672309 + | hypothetical protein TERM 878 672351 - 672394 + F 100 -13.5 -3.34947 | gap 1, opp_overlap 672351 672354, overlap 672354 TCACTAATTGATAGA TAACG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCGTTA TTCTAGAGATTATTA TERM 879 672394 - 672351 - f 100 -13.5 -2.95884 | gap 1, opp_overlap 672351 672354, overlap 672354 TCACTAATTGATAGA TAACG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCGTTA TTCTAGAGATTATTA TERM 880 672391 - 672354 - f 89 -10.8 -3.61983 | gap 1, opp_overlap 672351 672354, overlap 672351 CTAATTGATAGATAA CG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCG TTATTCTAGAGATTA TERM 881 672354 - 672391 + F 90 -10.8 -3.8062 | gap 1, opp_overlap 672354 672351, overlap 672351 CTAATTGATAGATAA CG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCG TTATTCTAGAGATTA SAG0682 672433 - 673662 + | permease, putative TERM 882 674260 - 674240 - f 79 -6.9 -4.57209 | opp_overlap 674243, overlap 674243 ACAGTAAGGATAAAA CATTAGTTG AAG CAACTATTG TTGGCATATATAAAG TERM 883 674243 - 674257 + F 70 -7.2 -3.67558 | opp_overlap 674243 674240 GTAAGGATAAAACAT TAGTTG AAG CAACTA TTGTTGGCATATATA TERM 884 674469 - 674455 - f 77 -4.3 -5.14965 | AGTTTTATCAAAAAA CAATC CTATT GATTG GAATAAATACCAACT SAG0684 675121 - 675792 + | ABC transporter, ATP-binding protein TERM 885 675834 - 675801 - T 86 -4 -5.88565 | gap 1, opp_overlap 675801 TTTATAATAAAAAAA TACCTCC-CTTTCTT AAATA ATAAAAGAGGAGGTA TTTTTTAGAAATGGT SAG0685 677267 - 675849 - | hypothetical protein SAG0686 677555 - 678340 + | DNA-entry nuclease, putative TERM 886 678338 - 678369 + T 75 -8.2 -3.6216 | opp_overlap 678341 678346, overlap 678346 GAAATAACACTAAAT TAATAAAAGAGCAA CTAA TTGCTCTTTTTTTG TTGTCATTCTTAGTG TERM 887 678366 - 678341 - T 73 -7.7 -3.62191 | opp_overlap 678338 678346, overlap 678346 ATAACACTAAATTAA TAAAAGAGCAA CTAA TTGCTCTTTTT TTGTTGTCATTCTTA TERM 888 678346 - 678361 + T 100 -7.6 -5.89921 | opp_overlap 678341 678346, overlap 678338 ACTAAATTAATAAAA GAGCAA CTAA TTGCTC TTTTTTTGTTGTCAT TERM 889 678361 - 678346 - T 87 -7.6 -4.85545 | opp_overlap 678346 678338, overlap 678341 ACTAAATTAATAAAA GAGCAA CTAA TTGCTC TTTTTTTGTTGTCAT SAG0687 679056 - 678418 - | DedA family protein, putative SAG0688 679273 - 679929 + | ABC transporter, ATP-binding protein TERM 890 679962 - 679980 + G 88 -8.2 -4.53774 | overlap 679951 TCTTTAATGTCATTA CTAATGGC ATC GTCATTAG TTTTGATTACTTTAT SAG0689 679926 - 680699 + | hypothetical protein SAG0690 680863 - 681681 + | hypothetical protein TERM 891 681711 - 681679 - T 100 -12.3 -4.65933 | opp_overlap 681684, overlap 681684 CATTTGGAAAATAAA TAAAACCAAAAAGTT TAA AACTTTTTGGTTTAA CTGCTATTAATTGGT TERM 892 681706 - 681684 - T 100 -12.2 -5.26247 | opp_overlap 681684, overlap 681679 GGAAAATAAATAAAA CCAAAAAGTT TAA AACTTTTTGG TTTAACTGCTATTAA TERM 893 681684 - 681706 + T 95 -12.2 -3.71607 | opp_overlap 681684 681679 GGAAAATAAATAAAA CCAAAAAGTT TAA AACTTTTTGG TTTAACTGCTATTAA SAG0691 682602 - 681718 - | LysR family transcriptional regulator TERM 894 681797 - 681817 + g 76 -9.9 -3.05384 | opp_overlap 681796 681795 TAAGCAATACCAATC GGATAAAAA TTA TTTTTATCC TTAAGTGGGACCCAG SAG0692 682795 - 683376 + | regulatory protein, putative SAG0693 684523 - 683390 - | IS1548 transposase ldhA 685192 - 686184 + | D-lactate dehydrogenase TERM 895 686187 - 686200 + F 100 -6.7 -5.626 | opp_overlap 686187 GAAAGTCAACTAAAA GATGC TTAG GCATC TTTTTTTGTGGGGTA TERM 896 686200 - 686187 - f 78 -6.7 -4.47271 | opp_overlap 686187 GAAAGTCAACTAAAA GATGC TTAG GCATC TTTTTTTGTGGGGTA TERM 897 686321 - 686301 - f 79 -2.7 -5.88565 | opp_overlap 686281 686305, overlap 686281 686293 686303 TTTATAATAAAAAAA GATATTTTT TAT AAAAATATT GAAAAAACATCAGAT TERM 898 686319 - 686303 - f 71 -5.3 -4.57921 | opp_overlap 686305, overlap 686293 686301 TATAATAAAAAAAGA TATTTTT TAT AAAAATA TTGAAAAAACATCAG TERM 899 686546 - 686559 + G 80 -6.7 -4.87665 | CTCAACTGGCGTTCT TGGCT CGGC AGCCA TTTTTGTCAGTCAAA SAG0696 686391 - 687941 + | sugar transporter, putative TERM 900 687973 - 687947 - f 74 -9.5 -2.71995 | opp_overlap 687948, overlap 687939 687946 687945 TAAAGATTAAAAAGT TTAGCTGCTCT TCAAT AGAGCAGCTAT TTTGTTAAATAAGAG TERM 901 687948 - 687972 + F 100 -13 -4.67982 | opp_overlap 687939 687947 687946 687945 AAAGATTAAAAAGTT TAGCTGCTCT TCAAT AGAGCAGCTA TTTTGTTAAATAAGA TERM 902 688588 - 688602 + G 76 -6.4 -4.46112 | overlap 688590 TATTAGATGTTTGCT TTGGCT TAG AGCCGA TTTATTTAGCTGGCG SAG0697 688008 - 689033 + | 2-keto-3-deoxygluconate kinase SAG0698 689050 - 690849 + | beta-D-glucuronidase SAG0699 690878 - 691549 + | GntR family transcriptional regulator TERM 903 691583 - 691564 - f 100 -8 -5.35721 | opp_overlap 691556 691564 ATATAAGAAGAAAAA TAGCTATT CTTG AATAGCTA TTTTTTTAGTATTCT TERM 904 691564 - 691583 + F 100 -8 -5.6473 | opp_overlap 691564, overlap 691556 ATATAAGAAGAAAAA TAGCTATT CTTG AATAGCTA TTTTTTTAGTATTCT eda-1 691666 - 692283 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 905 692358 - 692335 - g 72 -3.8 -5.05782 | overlap 692340 ATTTATGTTAAAAAA TCAAGCAGCT ATAC AGCTGTATGA AGAGGTCAAGAGACA TERM 906 692869 - 692883 + G 74 -5 -4.71828 | opp_overlap 692869 AGCTTTTATTGAACA TCGACA TTT TGTTGA TTTTATTACTAAACT TERM 907 693245 - 693263 + G 73 -9.6 -2.86217 | overlap 693244 GACGTGGGTGTGGAT TCACTTGG TGA CCAAGTGG CTTTAACTGTTAATA uxaC 692300 - 693700 + | glucuronate isomerase uxuA 693718 - 694764 + | mannonate dehydratase SAG0703 694888 - 695727 + | D-mannonate oxidoreductase TERM 908 695743 - 695777 + F 80 -5.9 -5.01732 | gap 1, opp_overlap 695743 TTTACAAGATAATAG CCACTTAACAC-ATAA GAGA TTATTGAGTTGAGTGG TTTTTTAAGGAAATT SAG0704 695880 - 696692 + | HAD superfamily hydrolase SAG0705 696708 - 698498 + | glycosy hydrolase family protein TERM 909 698530 - 698558 + T 100 -14.9 -2.72344 | opp_overlap 698530 698538, overlap 698538 TACTTTTATGTAACA TAAAAAAAGAGCT TAA AGCTCTTTTTTTA TCCTTCAAAATAGAG TERM 910 698558 - 698530 - T 100 -14.9 -3.08996 | opp_overlap 698530 698538, overlap 698538 TACTTTTATGTAACA TAAAAAAAGAGCT TAA AGCTCTTTTTTTA TCCTTCAAAATAGAG TERM 911 698538 - 698550 + T 100 -7.7 -5.71983 | opp_overlap 698530 698538, overlap 698530 TGTAACATAAAAAAA GAGCT TAA AGCTC TTTTTTTATCCTTCA TERM 912 698550 - 698538 - T 100 -7.7 -5.80817 | opp_overlap 698538 698530, overlap 698530 TGTAACATAAAAAAA GAGCT TAA AGCTC TTTTTTTATCCTTCA pepQ 699641 - 698556 - | proline dipeptidase TERM 913 699776 - 699764 - H 84 -6.3 -5.24129 | GTTTTTCATAAAAAA GCTTT ATA AAAGC TTGAAAGTGTTTCCA TERM 914 700061 - 700041 - g 84 -3.3 -5.65513 | opp_overlap 700041 700042, overlap 700042 TAGCAAGTAAAAAAA CGACAAC TGTTGGT GTTGTCA TTCCTAATATCGCAA SAG0707 699851 - 700855 + | RegM family transcriptional regulator TERM 915 700943 - 700968 + F 100 -7.7 -5.42862 | gap 1, opp_overlap 700945 ATGATATATTGAGAG GATTAGGGTAGC TTA GCT-TCCTAATC TTTTTTTAGAGGTGT SAG0708 700987 - 702453 + | cytoplasmic alpha-amylase SAG0709 702498 - 703496 + | glycosyl transferase, group 1 family protein SAG0710 703498 - 704832 + | glycosyl transferase, group 1 family protein TERM 916 705078 - 705109 + F 100 -8.8 -5.60993 | opp_overlap 705076, overlap 705076 705080 TGAGGTGGAACCACG TAGTCTTTACGTCC TTTT GGATGTAAAGGCTC TTTTTTTATAAAAGA TERM 917 705080 - 705107 + F 100 -11.4 -4.45201 | opp_overlap 705076, overlap 705076 705078 AGGTGGAACCACGTA GTCTTTACGTCC TTTT GGATGTAAAGGC TCTTTTTTTATAAAA thrS 705289 - 707232 + | threonyl-tRNA synthetase TERM 918 707275 - 707300 + F 82 -6.3 -5.1101 | gap 1 AATAAATGATGTGAA CTGATTACTGTA TGA TGCAG-AATCAG TTTTTTAGATGCTAA TERM 919 707305 - 707315 + F 86 -4 -5.7827 | TGCAGAATCAGTTTT TTAG ATG CTAA TTTTTTCTTTATGTT SAG0712 707454 - 708158 + | DNA-binding response regulator TERM 920 708167 - 708182 + F 79 -4.7 -5.14965 | opp_overlap 708167 TGTTTAAAAATATAA TGGCT AGTAAG AGCCA TTTTTTAGTGAAGAT SAG0713 708256 - 709275 + | hypothetical protein TERM 921 709287 - 709320 + F 100 -15.7 -3.67517 | opp_overlap 709287 709293, overlap 709293 CTGATACATATACTA TTAAAAGATACCATA GTAC TATGGTATCTTTTAA TTTGAGGTATTAATG TERM 922 709320 - 709287 - f 100 -15.7 -2.74597 | opp_overlap 709287 709293, overlap 709293 CTGATACATATACTA TTAAAAGATACCATA GTAC TATGGTATCTTTTAA TTTGAGGTATTAATG TERM 923 709314 - 709293 - f 95 -10.3 -4.34345 | opp_overlap 709293 709287, overlap 709287 CATATACTATTAAAA GATACCATA GTAC TATGGTATC TTTTAATTTGAGGTA TERM 924 709293 - 709314 + F 95 -10.3 -4.55798 | opp_overlap 709287 709293, overlap 709287 CATATACTATTAAAA GATACCATA GTAC TATGGTATC TTTTAATTTGAGGTA SAG0714 709443 - 710009 + | hypothetical protein TERM 925 710026 - 710056 + T 87 -12 -2.51312 | opp_overlap 710031, overlap 710031 TTAAATAAGATATAA AAAAACGAAGGTCT AAA AGGCCTTCGTTTTA ATTACTCAGTAGCTT TERM 926 710051 - 710031 - T 100 -9.7 -5.80248 | opp_overlap 710026 710031 TAAGATATAAAAAAA CGAAGGTCT AAA AGGCCTTCG TTTTAATTACTCAGT TERM 927 710031 - 710051 + T 100 -11.9 -4.45945 | opp_overlap 710031, overlap 710026 TAAGATATAAAAAAA CGAAGGTCT AAA AGGCCTTCG TTTTAATTACTCAGT SAG0715 710708 - 710058 - | amino acid ABC transporter, permease protein TERM 928 710520 - 710504 - G 79 -5.2 -5.10601 | AGAAAATGATAAAAA TCCAAA GTAGA TTTGGA ACATTTCTGACAAAT SAG0716 711415 - 710720 - | amino acid ABC transporter, permease protein SAG0717 712228 - 711428 - | amino acid ABC transporter, amino acid-binding protein SAG0718 712995 - 712240 - | amino acid ABC transporter, ATP-binding protein TERM 929 713022 - 713038 + H 78 -9.5 -3.37354 | opp_overlap 713017, overlap 713004 AAAATAACAGTTTAT TGTTAGG TTA CCTAACA TTATAGATAAGTGTA SAG0719 713335 - 714045 + | DNA-binding response regulator SAG0720 714038 - 715387 + | sensory box histidine kinase SAG0721 715391 - 716200 + | metallo-beta-lactamase superfamily protein SAG0722 716203 - 716571 + | hypothetical protein TERM 930 716617 - 716565 - f 83 -10.9 -2.80345 | opp_overlap 716576 716581, overlap 716576 716579 716581 ACCTGATAAAATTGA TGAATAGTTAACAAGAGACTAGG TGTGTAT CCTAGTCTTTTGTTGAATATTCA AATATGTAATTAAGG TERM 931 716576 - 716606 + F 83 -10.6 -3.19026 | opp_overlap 716576 716565 716579 716581, overlap 716581 TTGATGAATAGTTAA CAAGAGACTAGG TGTGTAT CCTAGTCTTTTG TTGAATATTCAAATA TERM 932 716606 - 716576 - f 71 -8.4 -3.20348 | opp_overlap 716576 716581, overlap 716565 716579 716581 TTGATGAATAGTTAA CAAGAGACTAGG TGTGTAT CCTAGTCTTTTG TTGAATATTCAAATA TERM 933 716581 - 716601 + F 79 -6.9 -4.71776 | opp_overlap 716579 716576 716565 716581, overlap 716576 GAATAGTTAACAAGA GACTAGG TGTGTAT CCTAGTC TTTTGTTGAATATTC rnc 716723 - 717433 + | ribonuclease III TERM 934 718075 - 718065 - g 73 -5.4 -4.56153 | CCATTAGAAAAACAA GCAA GTA TTGC CAAGCGTTTTTTAGT TERM 935 718684 - 718674 - g 73 -5.4 -4.56187 | GAGAATCAAAAACAA GCTT CTC AAGC TAAATCTCAAGAAAT SAG0724 717441 - 720980 + | chromosome segregation SMC protein TERM 936 720977 - 721011 + F 100 -13.8 -3.09429 | opp_overlap 720980 720985, overlap 720985 TCAAGAAATGACCAA TTAGAAAACAGAAGGG GAT CCCTTCTGTTTTTTGG ATTTTCAGCCTTATT TERM 937 721008 - 720980 - f 100 -13.3 -2.83674 | opp_overlap 720977 720985, overlap 720985 AGAAATGACCAATTA GAAAACAGAAGGG GAT CCCTTCTGTTTTT TGGATTTTCAGCCTT TERM 938 721003 - 720985 - f 100 -13.2 -4.56607 | opp_overlap 720977 720985, overlap 720980 TGACCAATTAGAAAA CAGAAGGG GAT CCCTTCTG TTTTTTGGATTTTCA TERM 939 720985 - 721003 + F 100 -13.2 -5.2696 | opp_overlap 720985 720980, overlap 720977 TGACCAATTAGAAAA CAGAAGGG GAT CCCTTCTG TTTTTTGGATTTTCA TERM 940 721161 - 721140 - g 73 -2.3 -5.31877 | overlap 721141 721142 ACCTATGATAAAAAA CGTTTAGCA AATG TGCTAAAAA AATTTAAAGAACAAG SAG0725 721071 - 721868 + | HAD superfamily hydrolase TERM 941 721998 - 721985 - g 73 -5.3 -4.56887 | overlap 721987 GAAAAAGGTATAAAA GTTGT TATT ACAAC AGGGCGTCCTTTAAA SAG0726 721868 - 722692 + | HAD superfamily hydrolase ftsY 722692 - 724302 + | signal recognition particle-docking protein FtsY TERM 942 724310 - 724330 + T 91 -8.4 -5.0916 | opp_overlap 724310 TTTTATAAGAAAAAA GAACTTTC ATTTA GAAAGTTC TTTTTATATTAAAAG TERM 943 724330 - 724310 - T 100 -8.4 -5.55769 | opp_overlap 724310 TTTTATAAGAAAAAA GAACTTTC ATTTA GAAAGTTC TTTTTATATTAAAAG SAG0728 725151 - 724339 - | hypothetical protein TERM 944 724584 - 724606 + g 72 -9.2 -2.58134 | overlap 724583 724582 724580 GATATCCTTCGTGTT TGGGTTCGTT ATA AACAAACCCA GTATATTGTATTTGG SAG0729 726053 - 725151 - | ABC transporter, permease protein, putative SAG0730 726187 - 726059 - | hypothetical protein SAG0731 726320 - 727363 + | luciferase family protein TERM 945 727366 - 727378 + F 90 -4.1 -5.95946 | opp_overlap 727366 TGAAAAGAATTAAAG CAGAT CTG GTCTG TTTTTTTATTGTTAG TERM 946 727915 - 727885 - g 74 -8.4 -3.72592 | opp_overlap 727893, overlap 727867 727886 727893 AACCTTGAGGAAGAA GCTCAAAACTATCT TAC AGATGGTTTTGAGA CAACTACGAAGGCAC TERM 947 727914 - 727886 - g 84 -11.9 -2.83073 | opp_overlap 727893, overlap 727867 727885 727893 ACCTTGAGGAAGAAG CTCAAAACTATCT TAC AGATGGTTTTGAG ACAACTACGAAGGCA TERM 948 728292 - 728273 - g 93 -6.4 -5.7946 | overlap 728274 CTGTCAAGAAAAAAA TCGTTCCA GCTA TGGAACGC CGTATCCGTACAGAA TERM 949 728291 - 728274 - g 86 -9.9 -4.06592 | overlap 728273 TGTCAAGAAAAAAAT CGTTCCA GCTA TGGAACG CCGTATCCGTACAGA SAG0732 727468 - 729630 + | transcriptional accessory protein Tex, putative SAG0733 729623 - 730051 + | hypothetical protein SAG0734 730132 - 730395 + | phage shock protein C, putative TERM 950 730406 - 730428 + G 88 -4.9 -5.52096 | opp_overlap 730406 GGTAATTCATATAAA GGAGATTTG CTAGA TGAATCTCC TTTTTTCTTAGCTTT SAG0735 730373 - 730507 + | hypothetical protein hprK 730623 - 731558 + | HPr kinase/phosphorylase TERM 951 731790 - 731812 + G 70 -8.5 -3.45571 | opp_overlap 731789 731792, overlap 731783 GCACCCAGTAGAGAT TATCGCCAT CTGGA ATGGCGGTA TTGCTATTTACGGAG lgt 731551 - 732324 + | prolipoprotein diacylglyceryl transferase SAG0738 732339 - 732737 + | hypothetical protein SAG0739 732734 - 733165 + | hypothetical protein TERM 952 733190 - 733170 - T 100 -12.7 -6.01725 | opp_overlap 733170 AAGAAAAATAAAAAA GAAGCTACT ATA AGTAGCTTC TTTTTTATGAGATTT TERM 953 733170 - 733190 + T 100 -12.7 -5.28826 | opp_overlap 733170 AAGAAAAATAAAAAA GAAGCTACT ATA AGTAGCTTC TTTTTTATGAGATTT SAG0740 733481 - 733206 - | hypothetical protein TERM 954 733612 - 733622 + H 74 -4 -5.243 | opp_overlap 733612, overlap 733601 ATATTAGTAGTAGAA TACT AAA AGTA TTTTTTACTACTTTC TERM 955 734403 - 734392 - g 83 -5.8 -5.1675 | opp_overlap 734392 734391 TCACTGATGAAAAAA CACG TGAG CGTG GTCTTTTTTTAGCAG SAG0741 733836 - 734747 + | hypothetical protein SAG0742 734877 - 736163 + | U32 family peptidase SAG0743 736290 - 736502 + | hypothetical protein TERM 956 736532 - 736504 - f 95 -10.5 -4.41348 | opp_overlap 736510, overlap 736510 CTTTTCGTAAATAAA TAAAAAGTGGTTT CAA AAACCACTTTTTT TGTCGAGACAAACGA TERM 957 736510 - 736526 + F 100 -9.5 -5.60993 | opp_overlap 736504 736510 GTAAATAAATAAAAA GTGGTTT CAA AAACCAC TTTTTTTGTCGAGAC TERM 958 736526 - 736510 - f 100 -9.5 -5.5454 | opp_overlap 736510, overlap 736504 GTAAATAAATAAAAA GTGGTTT CAA AAACCAC TTTTTTTGTCGAGAC SAG0744 736626 - 737423 + | hypothetical protein TERM 959 737458 - 737491 + T 89 -11.9 -3.24613 | overlap 737454 ATCATTATGTACTTT CCTCTATCATTAGAT GTAT GTCTCATGATAGAGG TTCAGTTCATTAGTG SAG0745 738865 - 737525 - | Mn2+/Fe2+ transporter TERM 960 739441 - 739478 + H 100 -12.9 -5.67063 | opp_overlap 739441 739446 739448, overlap 739446 TTTGTGCTGGATTAA TGAGAGACTCCCTATAG TTTT CTATAGGGAGTCTTTAG TTTTTTTGTGCTACC TERM 961 739477 - 739441 - H 83 -10.4 -3.14132 | gap 1, opp_overlap 739441 739446, overlap 739446 739448 TTTGTGCTGGATTAA TGAGAGACTCCCTATAG TTTT CTATAGGGAGTCTTT-A GTTTTTTTGTGCTAC TERM 962 739473 - 739446 - H 100 -17.2 -2.93723 | opp_overlap 739441 739446, overlap 739441 739448 GCTGGATTAATGAGA GACTCCCTATAG TTTT CTATAGGGAGTC TTTAGTTTTTTTGTG TERM 963 739446 - 739473 + H 100 -17.2 -4.55485 | opp_overlap 739446 739441 739448, overlap 739441 GCTGGATTAATGAGA GACTCCCTATAG TTTT CTATAGGGAGTC TTTAGTTTTTTTGTG TERM 964 739471 - 739448 - H 100 -14 -3.02096 | opp_overlap 739446 739441, overlap 739446 739441 TGGATTAATGAGAGA CTCCCTATAG TTTT CTATAGGGAG TCTTTAGTTTTTTTG TERM 965 739539 - 739568 + H 100 -9.5 -5.45802 | gap 1 GACTTCTCATCCCTC CCCTTAGTTTTCTA TTT TAGAAG-CTAAGGG TTTTTATTTTAGAAG ribD 739594 - 740703 + | riboflavin biosynthesis protein RibD ribE 740684 - 741334 + | riboflavin synthase subunit alpha ribA 741352 - 742545 + | riboflavin biosynthesis protein RibA ribH 742560 - 743030 + | riboflavin synthase, beta subunit TERM 966 743061 - 743101 + T 100 -10.8 -4.16787 | gap 1, opp_overlap 743063 743071, overlap 743063 743071 AAGTTCAGTAGAGGT AATATTAAAACCCA-CCTT AAAT AAGGATGGGTTTTAATATA TTCTTATTTCATTGT TERM 967 743099 - 743063 - T 100 -13.4 -3.14468 | gap 1, opp_overlap 743061 743063 743071, overlap 743071 GTTCAGTAGAGGTAA TATTAAAACCCA-CCTT AAAT AAGGATGGGTTTTAATA TATTCTTATTTCATT TERM 968 743063 - 743099 + T 100 -13.4 -3.65974 | gap 1, opp_overlap 743063 743071, overlap 743061 743071 GTTCAGTAGAGGTAA TATTAAAACCCA-CCTT AAAT AAGGATGGGTTTTAATA TATTCTTATTTCATT TERM 969 743091 - 743071 - T 74 -6.2 -4.43681 | gap 1, opp_overlap 743063 743061 743071, overlap 743063 GAGGTAATATTAAAA CCCA-CCTT AAAT AAGGATGGG TTTTAATATATTCTT TERM 970 743071 - 743091 + T 74 -6.2 -4.45723 | gap 1, opp_overlap 743071 743063, overlap 743063 743061 GAGGTAATATTAAAA CCCA-CCTT AAAT AAGGATGGG TTTTAATATATTCTT lysS 744595 - 743105 - | lysyl-tRNA synthetase SAG0751 744770 - 745672 + | HAD superfamily hydrolase TERM 971 745710 - 745673 - T 100 -14.5 -3.51137 | opp_overlap 745678, overlap 745678 745681 AAGTATGCTAGATAA TTAAATAATCCACTAGA TGAA TCTAGTGGATTATTTTA GTGTGTCATTTTGAC TERM 972 745678 - 745705 + T 100 -14.4 -4.4084 | opp_overlap 745673 745678 745681 TGCTAGATAATTAAA TAATCCACTAGA TGAA TCTAGTGGATTA TTTTAGTGTGTCATT TERM 973 745705 - 745678 - T 100 -14.4 -4.04174 | opp_overlap 745678, overlap 745673 745681 TGCTAGATAATTAAA TAATCCACTAGA TGAA TCTAGTGGATTA TTTTAGTGTGTCATT TERM 974 745702 - 745681 - T 100 -11.7 -4.13903 | opp_overlap 745678, overlap 745678 745673 TAGATAATTAAATAA TCCACTAGA TGAA TCTAGTGGA TTATTTTAGTGTGTC SAG0752 746349 - 745708 - | phosphoglycerate mutase family protein SAG0753 746844 - 746371 - | ebsC family protein, putative TERM 975 746588 - 746602 + g 73 -2.1 -5.33405 | TGGAGATCTTTTTGA GGTAT CATTT GTACC TTTTTGTTTCCTGAA SAG0754 747139 - 747756 + | hypothetical protein TERM 976 747764 - 747791 + T 79 -10 -2.95595 | opp_overlap 747769, overlap 747769 ATAAATAGTTTATCA AAAAAGCTACTG TTAA CAGTAGCTTTTA CTCTTTTACTTTTCC TERM 977 747786 - 747769 - T 100 -9.9 -5.15634 | opp_overlap 747764 747769 TAGTTTATCAAAAAA GCTACTG TTAA CAGTAGC TTTTACTCTTTTACT TERM 978 747769 - 747786 + T 93 -9.9 -4.56729 | opp_overlap 747769, overlap 747764 TAGTTTATCAAAAAA GCTACTG TTAA CAGTAGC TTTTACTCTTTTACT SAG0755 748637 - 747789 - | U32 family peptidase SAG0756 748793 - 749317 + | hypothetical protein TERM 979 749671 - 749651 - g 73 -6.3 -4.50298 | TAAAGTTAAAAAGAA TGACAAAAT TGA ATTTTATCA GGAAGTTTACAAAAA SAG0757 749301 - 749690 + | protein of unknown function/lipoprotein, putative TERM 980 749733 - 749688 - T 100 -15.1 -5.27923 | opp_overlap 749699 GAAGTTTACAAAAAA TAAGATAAAAACAAGTTGGAG ATAT CTCCAACTTGTTTTTATGTTT TTGAAAGGCTGTAGT TERM 981 749699 - 749722 + T 100 -14 -5.36364 | opp_overlap 749688 AAAATAAGATAAAAA CAAGTTGGAG ATAT CTCCAACTTG TTTTTATGTTTTTGA SAG0758 751548 - 749749 - | oligoendopeptidase F, putative TERM 982 752070 - 752053 - g 78 -5.7 -5.00765 | opp_overlap 752056 AATTAATTATAAAAA TAATCTT AACC AAGATTA CCTAGGAAAGTTATC TERM 983 752352 - 752342 - g 74 -4 -5.24531 | ATTCGCGAGAAAAAA TTGA AAG TCAA AAATGAGATAACCAA TERM 984 753590 - 753578 - g 76 -7.7 -4.05033 | TGGACTCTATATAAA GCTCA AAA TGAGC TAACAAAAATAGGTG ppc 751757 - 754552 + | phosphoenolpyruvate carboxylase SAG0760 754678 - 755811 + | IS1548 transposase ftsW 755984 - 757252 + | cell cycle protein FtsW TERM 985 757260 - 757293 + F 100 -12.7 -5.12707 | opp_overlap 757262 757268, overlap 757262 757268 TTAAATAATCATCCA AACAAAAATCGAGAT TTTT ATCTCGATTTTTGTA TTTTTTGAAATTTAA TERM 986 757291 - 757262 - f 100 -15.3 -3.74658 | opp_overlap 757260 757262 757268, overlap 757268 AAATAATCATCCAAA CAAAAATCGAGAT TTTT ATCTCGATTTTTG TATTTTTTGAAATTT TERM 987 757262 - 757291 + F 100 -15.3 -4.18259 | opp_overlap 757262 757268, overlap 757260 757268 AAATAATCATCCAAA CAAAAATCGAGAT TTTT ATCTCGATTTTTG TATTTTTTGAAATTT TERM 988 757285 - 757268 - f 95 -8.5 -5.30616 | opp_overlap 757262 757260 757268, overlap 757262 TCATCCAAACAAAAA TCGAGAT TTTT ATCTCGA TTTTTGTATTTTTTG TERM 989 757268 - 757285 + F 100 -8.5 -5.41787 | opp_overlap 757268 757262, overlap 757262 757260 TCATCCAAACAAAAA TCGAGAT TTTT ATCTCGA TTTTTGTATTTTTTG tuf 757604 - 758800 + | elongation factor Tu TERM 990 758857 - 758872 + F 95 -9 -5.25893 | opp_overlap 758859 AGCTCAAATTGTGAA GAGTCC TCAG GGACTC TTTTTTAGTATCTAT TERM 991 759336 - 759320 - g 77 -3 -5.5353 | overlap 759313 GATATCAACAAAAAA GCAAAA GCTAT CTTTGC TAATGGTTTGACTCC tpiA 758981 - 759739 + | triosephosphate isomerase TERM 992 759757 - 759781 + F 93 -9.3 -4.79352 | opp_overlap 759757 CACATGATATCTAAA GGCATAGCACT CTA GGTGATATGCC TTTTCTTATAGATAG TERM 993 759781 - 759757 - f 77 -8.6 -3.73414 | opp_overlap 759757 CACATGATATCTAAA GGCATAGCAC TCTAG GTGATATGCC TTTTCTTATAGATAG SAG0764 759916 - 760608 + | phosphoglyceromutase TERM 994 760618 - 760659 + F 100 -13.5 -3.97406 | gap 1, opp_overlap 760629, overlap 760629 AAATAATCTAATCTT TATATAAAAAATTCAGGCCA AGT TGGCTTGAATTTTTTAT-TA TTTATAACATTTTGA TERM 995 760629 - 760649 + F 100 -10.5 -5.74288 | opp_overlap 760629, overlap 760618 TCTTTATATAAAAAA TTCAGGCCA AGT TGGCTTGAA TTTTTTATTATTTAT TERM 996 760649 - 760629 - f 100 -8.3 -5.36441 | opp_overlap 760618 760629 TCTTTATATAAAAAA TTCAGGCCA AGT TGGCTTGAA TTTTTTATTATTTAT TERM 997 760796 - 760814 + G 86 -4.6 -5.70522 | opp_overlap 760786 AAATGCTAGCATACC TAGACGAT TAA ATCTTCTA TTTTTTATTATTGTT TERM 998 761243 - 761231 - g 72 -7.7 -3.71645 | AACCGTATATGCAAA TGCAG TTG CTGCA GTTCCAGTGAGCGCT TERM 999 761550 - 761532 - g 74 -3.8 -5.10077 | AAATATTTGAAAAAA GGCTATTC ACT GAATGACC GAGTGGGAACTTCTT TERM 1000 761764 - 761779 + G 73 -5.4 -4.56775 | ATGGCAGTGAATTAT CTAGTG GACG CGCTAG TTTTTCCGAAGGGAT SAG0765 760737 - 762782 + | penicillin-binding protein 2b recR 762797 - 763393 + | recombination protein RecR TERM 1001 763404 - 763432 + F 100 -11.9 -4.15565 | opp_overlap 763404, overlap 763410 TATAATTGTTATAAA GAAAAGGTTGGGA ATC TCCTAACTTTTTC TTTTACAATACTAAC TERM 1002 763432 - 763404 - f 74 -7.5 -3.90328 | opp_overlap 763404 763410 TATAATTGTTATAAA GAAAAGGTTGGGA ATC TCCTAACTTTTTC TTTTACAATACTAAC TERM 1003 763410 - 763426 + F 100 -7.3 -5.46706 | opp_overlap 763404, overlap 763404 TGTTATAAAGAAAAG GTTGGGA ATC TCCTAAC TTTTTCTTTTACAAT TERM 1004 764386 - 764396 + G 75 -5.4 -4.85782 | GGGGCTTGTGGTTTA TCAC GCT GTGA TTTCTTTTTGACGAA ddl 763534 - 764580 + | D-alanyl-alanine synthetase A TERM 1005 764574 - 764622 + F 86 -11.4 -2.93633 | opp_overlap 764585 764587, overlap 764585 764617 ACGTGAGAGTCATTT AATTTAAAAAAGTTCAACTAAG TCTTT CTTAGTTGAGCTTTTTCAAATC TATGATATGTTATGA TERM 1006 764611 - 764585 - f 93 -8.1 -5.16572 | opp_overlap 764574 764585, overlap 764587 ATTTAATTTAAAAAA GTTCAACTAAG TCTTT CTTAGTTGAGC TTTTTCAAATCTATG TERM 1007 764585 - 764611 + F 95 -10.3 -4.65838 | opp_overlap 764585 764587, overlap 764574 ATTTAATTTAAAAAA GTTCAACTAAG TCTTT CTTAGTTGAGC TTTTTCAAATCTATG TERM 1008 764609 - 764587 - f 73 -9.3 -2.80592 | opp_overlap 764585 764574, overlap 764585 TTAATTTAAAAAAGT TCAACTAAG TCTTT CTTAGTTGA GCTTTTTCAAATCTA murF 764727 - 766094 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 1009 766102 - 766125 + F 100 -12.6 -6.04324 | opp_overlap 766100 766115 TAGGATAATAGAGGT GTTAGGGTAA CAAG TTACCCTAAC TTTTTTGTTTTTTAA TERM 1010 766579 - 766599 + G 81 -9.1 -4.08216 | overlap 766569 CTCAGCAGTTATGGT TACTGTATG TTG CATACGGTA TTTTAGGAGGAATCG SAG0769 766281 - 767501 + | oxalate:formate antiporter TERM 1011 767520 - 767540 + F 100 -9.1 -5.63517 | opp_overlap 767520 767521, overlap 767521 ATATCTAATTTAAAA TTCTTTGGT TTT ACCAAAGAG TTTTTTCTTTGAAAA TERM 1012 767540 - 767520 - f 74 -6.9 -4.29176 | opp_overlap 767520 767521, overlap 767521 ATATCTAATTTAAAA TTCTTTGGT TTT ACCAAAGAG TTTTTTCTTTGAAAA TERM 1013 767521 - 767539 + F 91 -10.4 -3.97026 | opp_overlap 767520 767521, overlap 767520 TATCTAATTTAAAAT TCTTTGGT TTT ACCAAAGA GTTTTTTCTTTGAAA TERM 1014 767539 - 767521 - f 83 -10.4 -3.16783 | opp_overlap 767521 767520, overlap 767520 TATCTAATTTAAAAT TCTTTGGT TTT ACCAAAGA GTTTTTTCTTTGAAA SAG0770 767630 - 768316 + | hypothetical protein TERM 1015 768334 - 768371 + F 95 -8.7 -5.18355 | opp_overlap 768336, overlap 768336 ATTTTAATATTATTA TATTATCTAGCTATTAA AAAA TAAATAGCTGGATAATG TTTTTCATTTTTAGC TERM 1016 768336 - 768369 + F 88 -9.1 -4.20007 | opp_overlap 768336, overlap 768334 TTTAATATTATTATA TTATCTAGCTATTAA AAAA TAAATAGCTGGATAA TGTTTTTCATTTTTA SAG0771 768495 - 770033 + | cell wall surface anchor family protein TERM 1017 770041 - 770072 + F 83 -8 -4.20367 | opp_overlap 770046, overlap 770043 CAAAATAATTTATTT TAGAAGCTTGGGTC TTTA GACACAGGCTTCTC TTCTTTCTTCGGAAA TERM 1018 770043 - 770070 + F 87 -10.6 -3.69841 | opp_overlap 770046, overlap 770041 AAATAATTTATTTTA GAAGCTTGGGTC TTTA GACACAGGCTTC TCTTCTTTCTTCGGA TERM 1019 771509 - 771521 + G 76 -6.3 -4.60487 | GGTGCTGTGGGTCAA CTTCA GTT TGAAG TTTTTAAACATCGTA prfC 770210 - 771754 + | peptide chain release factor 3 TERM 1020 771788 - 771757 - f 80 -7.4 -4.55016 | opp_overlap 771756 771763, overlap 771763 AGAAAAAATGTAAAA TTTAAAGTCACTCA AATT TGAGTGACTTTTTA AGTTTTTTAGACTAA TERM 1021 771782 - 771763 - f 90 -10.8 -3.94333 | opp_overlap 771756 771763, overlap 771757 AATGTAAAATTTAAA GTCACTCA AATT TGAGTGAC TTTTTAAGTTTTTTA TERM 1022 771763 - 771782 + F 100 -10.8 -4.95854 | opp_overlap 771763 771757, overlap 771756 AATGTAAAATTTAAA GTCACTCA AATT TGAGTGAC TTTTTAAGTTTTTTA SAG0773 771840 - 772220 + | hypothetical protein TERM 1023 772232 - 772251 + F 88 -7.2 -5.09259 | ATAAACAATTTAGCA GTAGTGAT TTTT ATCACTGC TTTTATTTTGAAGTA SAG0774 772341 - 773075 + | ABC transporter, ATP-binding protein SAG0775 773068 - 773730 + | ABC transporter, permease protein TERM 1024 774508 - 774493 - g 83 -6.2 -5.19275 | overlap 774506 AGTGATAAAATAAAA GTACTT AAAG AAGTAC TAACAAGTAAAGAGA SAG0776 773746 - 774576 + | YaeC family protein TERM 1025 774593 - 774616 + F 88 -6.6 -5.17507 | opp_overlap 774593 TAGATAAACTATGAA CCCTCCTTCT TTAT AGATGGTGGG TTTTTATTGCCTTTT TERM 1026 775008 - 774998 - g 72 -4 -4.90525 | CAACTTTAAATAAAA TTCA TAC TGAA GATAATACTATCCAA TERM 1027 776177 - 776134 - g 76 -6 -4.65168 | opp_overlap 776149 ATCACACGTGAAAAA CCATTACCATTTAAACCATC AGGT GGTGGCTTTAAAGGTAAAGG TGGACGAGGCAATGG TERM 1028 776353 - 776343 - g 78 -5.4 -4.90296 | AAAACCTCATAAAAA CACT TCA AGTG AAAAACAAACTGGAT SAG0777 774811 - 776397 + | DEAD-box ATP dependent DNA helicase TERM 1029 776413 - 776431 + T 100 -11 -6.07374 | opp_overlap 776413 GAGGATTATGAAAAA GGAGTTGC TGA GCGACTCC TTTTTTATTTTTTGT TERM 1030 776431 - 776413 - T 93 -8.8 -4.78107 | opp_overlap 776413 GAGGATTATGAAAAA GGAGTTGC TGA GCGACTCC TTTTTTATTTTTTGT SAG0778 776848 - 776582 - | hypothetical protein SAG0779 777605 - 776841 - | hypothetical protein TERM 1031 777270 - 777253 - G 77 -8.5 -3.8901 | TTGCAAAGCATTAAA TCAACGT TTGA ACGTTGA ACATGATCAAGAAGA SAG0780 777740 - 778480 + | acyltransferase family protein TERM 1032 778516 - 778495 - f 80 -8.9 -3.7108 | opp_overlap 778495 AGGGTTACATGGAAA CTATTTACT TTTT AGTAAATAG TTTTTTTGGTTTTTA TERM 1033 778495 - 778516 + F 100 -8.9 -5.85011 | opp_overlap 778495 AGGGTTACATGGAAA CTATTTACT TTTT AGTAAATAG TTTTTTTGGTTTTTA celA 778580 - 779233 + | competence protein CelA SAG0782 779217 - 781454 + | DNA internalization-related competence protein ComEC/Rec2 SAG0783 781580 - 782389 + | HAD superfamily hydrolase SAG0784 782400 - 783344 + | LacI family sugar-binding transcriptional regulator TERM 1034 783368 - 783395 + T 100 -7.8 -5.34309 | opp_overlap 783368 AAGTAATAGAAAAAA GGTTTCCAACTA AACT TGATTGGAAACC TTTTTATTTAATGAT TERM 1035 783395 - 783368 - T 100 -7.8 -5.50925 | opp_overlap 783368 AAGTAATAGAAAAAA GGTTTCCAACTA AACT TGATTGGAAACC TTTTTATTTAATGAT SAG0785 784395 - 783403 - | hypothetical protein TERM 1036 783638 - 783652 + g 74 -3.6 -5.22039 | AGAGGACTAACTTGA GGATTT TTA AAATTC TTTTTTCCATTTGCC SAG0786 784571 - 785299 + | hypothetical protein holA 785353 - 786390 + | DNA polymerase III subunit delta TERM 1037 786828 - 786812 - g 72 -8 -3.66803 | TTTGAAGACTTTAAA GCTGCT TTCAC AGCAGC AGCAACAGGACGTTT sodA 786470 - 787078 + | superoxide dismutase, Fe-Mn TERM 1038 787076 - 787112 + F 78 -9.8 -3.33737 | gap 1, opp_overlap 787056 787086, overlap 787079 787086 CAAGCTGCTAAAGCT TAATAAAA-AACGAGTC GATA GGCTCGTTTTTTTATTA TTCTAAAAGTTGATA TERM 1039 787079 - 787109 + F 72 -7.1 -3.8062 | gap 1, opp_overlap 787056 787086, overlap 787076 787086 GCTGCTAAAGCTTAA TAAAA-AACGAGTC GATA GGCTCGTTTTTTTA TTATTCTAAAAGTTG TERM 1040 787101 - 787086 - f 81 -4.6 -5.4756 | opp_overlap 787079 787076 787086 AAGCTTAATAAAAAA CGAGTC GATA GGCTCG TTTTTTTATTATTCT TERM 1041 787086 - 787101 + F 100 -6.8 -5.97979 | opp_overlap 787086, overlap 787079 787076 AAGCTTAATAAAAAA CGAGTC GATA GGCTCG TTTTTTTATTATTCT SAG0789 787416 - 788267 + | transcriptional antiterminator LicT SAG0790 788260 - 790128 + | PTS system, beta-glucosides-specific IIABC components bglA 790145 - 791572 + | 6-phospho-beta-glucosidase TERM 1042 791602 - 791646 + T 100 -11.7 -3.89881 | opp_overlap 791614, overlap 791614 AGTCTCTGTTTCAAT TTAATATAAAAAGGAGTATCC ATA GGTTACTCCTTTTTATTATAA TTTATGAAGGTTAAT TERM 1043 791614 - 791634 + T 100 -9.7 -5.25772 | opp_overlap 791614, overlap 791602 AATTTAATATAAAAA GGAGTATCC ATA GGTTACTCC TTTTTATTATAATTT TERM 1044 791634 - 791614 - T 100 -9.7 -5.1167 | opp_overlap 791614 791602 AATTTAATATAAAAA GGAGTATCC ATA GGTTACTCC TTTTTATTATAATTT SAG0792 792735 - 791641 - | hypothetical protein garK 792902 - 794044 + | glycerate kinase 2 SAG0794 794069 - 795325 + | GntP family permease SAG0795 795426 - 796490 + | hypothetical protein TERM 1045 796556 - 796502 - T 100 -13.3 -2.82776 | opp_overlap 796502 796517 796545, overlap 796517 TTAGAAATAAATCTA TCAAAATAATAAAAACCTCTTAGAT TAACT ATCTAAGAGGTTTTTATAAATGTGA TTTTATAACTTGGTT TERM 1046 796502 - 796556 + T 100 -13.3 -4.48823 | opp_overlap 796502 796517, overlap 796517 796545 TTAGAAATAAATCTA TCAAAATAATAAAAACCTCTTAGAT TAACT ATCTAAGAGGTTTTTATAAATGTGA TTTTATAACTTGGTT TERM 1047 796541 - 796517 - T 100 -11.6 -5.4593 | opp_overlap 796502 796517, overlap 796502 TCAAAATAATAAAAA CCTCTTAGAT TAACT ATCTAAGAGG TTTTTATAAATGTGA TERM 1048 796517 - 796541 + T 100 -11.6 -4.89852 | opp_overlap 796517 796502, overlap 796502 TCAAAATAATAAAAA CCTCTTAGAT TAACT ATCTAAGAGG TTTTTATAAATGTGA SAG0796 796988 - 796545 - | MarR family transcriptional regulator queA 798097 - 797069 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1049 797564 - 797582 + g 70 -3 -5.10933 | opp_overlap 797554, overlap 797554 ATGGAGACCGGCTGT TGGTGCAG CAG CAGAACCA TTTTCTTTTGCATAC TERM 1050 798166 - 798212 + H 86 -11.4 -2.68755 | overlap 798162 798177 GACCCAACTAATCTT TTTATTTAGAATGATTATAA AAAATAA TTGTAATCATTCTAAATAAG TGATATAATAATTGT SAG0798 798250 - 798930 + | hypothetical protein TERM 1051 798944 - 798977 + F 72 -3.3 -5.1417 | AAAATATTAATCGTG GAGTTATTGTCTA AACTAGAA TGGACAGTAATTC TTTTTAGTTTTATAA TERM 1052 799063 - 799022 - f 72 -4.7 -4.87665 | gap 1, opp_overlap 799023 TTTTATTGACAAAAA TTGGTATATACCAT-ATAAT ATA ATCATAAAGGTCTATACCAA ATAAAAGGAGAGTAA TERM 1053 799155 - 799124 - g 76 -6 -4.58395 | TTGAGGGGGGAAAAA TTGCATTTACTCTT TTAG AAGAGAAAATGAAA GCTGGTGCTCAAACT nagB 799081 - 799782 + | glucosamine-6-phosphate isomerase TERM 1054 799836 - 799799 - T 81 -2.9 -5.72254 | opp_overlap 799799, overlap 799810 GTAAATAATAAAAAA GTAAGGATGAATCTC AATGAGAA AAAATTCATTCTTAC TTTTTTATTATGCTT TERM 1055 799799 - 799836 + T 74 -2.2 -5.59534 | opp_overlap 799799 799810 GTAAATAATAAAAAA GTAAGGATGAATCT CAATGAGAAA AAATTCATTCTTAC TTTTTTATTATGCTT SAG0800 800810 - 799854 - | glutathione S-transferase family protein SAG0801 800906 - 801625 + | ribosomal small subunit pseudouridine synthase A, putative SAG0802 801716 - 801600 - | hypothetical protein TERM 1056 801760 - 801787 + GH 77 -8.6 -3.59984 | opp_overlap 801768, overlap 801775 CTTTTTGATGTCTCA TTTAGCAATTGC TCCT GCAATTCCTAAA TTGTATGCCTTTTAC SAG0803 801698 - 802849 + | major facilitator family protein TERM 1057 802876 - 802847 - fH 100 -9.5 -5.05153 | opp_overlap 802853, overlap 802853 ATGTCAAAAAATAAA TAAAAAGTTATCC GAAA GGATAACTTTTTT CGAATAGTAAAAGTA TERM 1058 802870 - 802853 - fH 100 -8.5 -5.63012 | opp_overlap 802853, overlap 802847 AAAAATAAATAAAAA GTTATCC GAAA GGATAAC TTTTTTCGAATAGTA TERM 1059 802853 - 802870 + FH 95 -8.5 -5.06451 | opp_overlap 802853 802847 AAAAATAAATAAAAA GTTATCC GAAA GGATAAC TTTTTTCGAATAGTA coiA 802901 - 803848 + | competence protein CoiA TERM 1060 805184 - 805174 - g 70 -3.2 -5.00846 | overlap 805168 TAAAGATGATAAAAA TCGC TTT GCAA TTCTCAATCATTATT pepB 803864 - 805669 + | group B oligopeptidase PepB TERM 1061 805713 - 805697 - f 85 -8 -4.43477 | opp_overlap 805697 GCTATTGAAGTAAAA CCAGTC AACTA GACTGG TTTTTGATAGTGATC TERM 1062 805697 - 805713 + F 90 -8 -4.78107 | opp_overlap 805697 GCTATTGAAGTAAAA CCAGTC AACTA GACTGG TTTTTGATAGTGATC SAG0806 805864 - 806490 + | HAD superfamily hydrolase SAG0807 806564 - 807271 + | O-methyltransferase family protein prsA 807332 - 808261 + | foldase protein PrsA SAG0809 808503 - 808988 + | hypothetical protein TERM 1063 811282 - 811272 - g 91 -6.8 -5.28942 | opp_overlap 811272 811270 811273 811275, overlap 811273 811276 GAGCTTAAAGAAAAA GCAG CAG CTGC AGCAGCTGGTGATGT TERM 1064 811273 - 811293 + G 73 -9.7 -2.54801 | opp_overlap 811272 811273 811276, overlap 811272 811270 811275 AGCTTAAAGAAAAAG CAGCAGCTG CAG CAGCTGGTG ATGTCTTTAAAGATA TERM 1065 811293 - 811273 - g 84 -9.7 -3.76281 | opp_overlap 811273 811272 811270 811275, overlap 811272 811276 AGCTTAAAGAAAAAG CAGCAGCTG CAG CAGCTGGTG ATGTCTTTAAAGATA TERM 1066 811290 - 811276 - g 74 -10 -2.65994 | opp_overlap 811275 811273 811272 811270, overlap 811272 811273 TTAAAGAAAAAGCAG CAGCTG CAG CAGCTG GTGATGTCTTTAAAG alaS 809004 - 811622 + | alanyl-tRNA synthetase TERM 1067 811691 - 811654 - f 80 -5.7 -4.9448 | gap 1, opp_overlap 811658 811662 811665, overlap 811656 811658 AGTTAGTAAATAAAA CAGACAAAGG-GCAGAAC ATC GTTCTGTTCCTTTGTGTA TATAGGAGAAATATG TERM 1068 811658 - 811687 + F 84 -10.9 -2.98823 | gap 1, opp_overlap 811656 811654 811658, overlap 811662 811665 AGTAAATAAAACAGA CAAAGGG-CAGAAC ATC GTTCTGTTCCTTTG TGTATATAGGAGAAA TERM 1069 811687 - 811658 - f 77 -8.7 -3.62235 | gap 1, opp_overlap 811658 811662 811665, overlap 811656 811654 AGTAAATAAAACAGA CAAAGG-GCAGAAC ATC GTTCTGTTCCTTTG TGTATATAGGAGAAA TERM 1070 811665 - 811679 + F 77 -8.6 -3.68084 | opp_overlap 811658 811656 811654, overlap 811662 811658 AAAACAGACAAAGGG CAGAAC ATC GTTCTG TTCCTTTGTGTATAT SAG0811 811704 - 812420 + | hypothetical protein TERM 1071 812449 - 812428 - f 74 -7.4 -4.05861 | opp_overlap 812428, overlap 812423 TTATATAAAAGATAA CCAAGTTT TAACTC AAACTTGG TTTTTCTTTAGACAT TERM 1072 812428 - 812449 + F 91 -7.4 -5.27938 | opp_overlap 812423 812428 TTATATAAAAGATAA CCAAGTTT TAACTC AAACTTGG TTTTTCTTTAGACAT TERM 1073 812727 - 812692 - g 78 -9.1 -3.69395 | GCTATCATCCAATAA TTGTAGGTACCGAAG TATTTG CTCAGGCACCTACAA CTGATCGCTATCCAG SAG0812 812508 - 813326 + | glycosyl transferase family protein TERM 1074 813338 - 813364 + F 93 -6.8 -5.44721 | opp_overlap 813337 813338 TTGAAGATTTAAAAG GTTACTAAAT TATTTCT ATTTAGTAAC TTTTTTTGGGGTGAT SAG0813 813470 - 813715 + | hypothetical protein SAG0814 813754 - 814041 + | hypothetical protein SAG0815 814086 - 814301 + | Cro/CI family transcriptional regulator SAG0816 814301 - 815062 + | hypothetical protein TERM 1075 815106 - 815140 + T 100 -11 -5.61913 | opp_overlap 815106 815111 TATATTAGTGTAAAA TAAAAGGATTGATTCT CTG AAAATCAGTCCTTTTA TTTTTTCTATTTCTT TERM 1076 815140 - 815106 - T 100 -11 -4.16279 | opp_overlap 815106, overlap 815111 TATATTAGTGTAAAA TAAAAGGATTGATTCT CTG AAAATCAGTCCTTTTA TTTTTTCTATTTCTT TERM 1077 815135 - 815111 - T 82 -6.5 -5.09259 | opp_overlap 815106, overlap 815106 TAGTGTAAAATAAAA GGATTGATTCT CTG AAAATCAGTCC TTTTATTTTTTCTAT SAG0817 815710 - 815147 - | hypothetical protein TERM 1078 815705 - 815754 + g 70 -6.8 -4.1043 | gap 1, opp_overlap 815717, overlap 815700 815714 815717 AGTGTTGTTATTTTT TGACATAAAAAATCTCCTTTTTT TATAC AGCAAAGGAGATTCTTT-TGTCA TTTGTCATGTTTAAC TERM 1079 815743 - 815717 - R 72 -2.4 -5.36441 | opp_overlap 815714 815705 815717 TTTTGACATAAAAAA TCTCCTTT TTTTATACAGC AAAGGAGA TTCTTTTGTCATTTG TERM 1080 815953 - 815919 - R 81 -10.2 -3.07307 | opp_overlap 815922 815928, overlap 815922 815928 GAAATTTGTATTTAA CTAGAAAAAGACACTA AAT CAGTGTCTTTTTCTTA TAATCCATAGTTATA TERM 1081 815922 - 815950 + r 100 -13.4 -3.43264 | opp_overlap 815922 815919 815928, overlap 815928 ATTTGTATTTAACTA GAAAAAGACACT AAATC AGTGTCTTTTTC TTATAATCCATAGTT TERM 1082 815950 - 815922 - R 100 -14.1 -2.75183 | opp_overlap 815922 815928, overlap 815919 815928 ATTTGTATTTAACTA GAAAAAGACACTA AAT CAGTGTCTTTTTC TTATAATCCATAGTT TERM 1083 815928 - 815944 + r 88 -6.6 -5.22006 | opp_overlap 815922 815919 815928, overlap 815922 ATTTAACTAGAAAAA GACACT AAATC AGTGTC TTTTTCTTATAATCC TERM 1084 815944 - 815928 - R 88 -7.3 -4.98857 | opp_overlap 815928 815922, overlap 815922 815919 ATTTAACTAGAAAAA GACACTA AAT CAGTGTC TTTTTCTTATAATCC nrdF 816910 - 815951 - | ribonucleotide-diphosphate reductase subunit beta TERM 1085 816019 - 816001 - G 79 -10.4 -3.18681 | opp_overlap 815981 816004 CTTCAACGCTACCAA GTAGGTAA CCA TTACCTAC TTGAGAGAAGAAGTC TERM 1086 816449 - 816461 + g 100 -9.1 -5.40072 | opp_overlap 816460 GAAAGTTTCGAGGTA GGTGG AAG CCACC TTTTTTTGAAGGGCA TERM 1087 817060 - 817078 + r 83 -10.4 -3.07856 | opp_overlap 817060, overlap 817055 GATAACATCATGAAA CTGAGATA GTT TATCTCAG TCTAGTTTCTGATGT TERM 1088 817078 - 817060 - R 89 -10.4 -3.8572 | opp_overlap 817060 817055 GATAACATCATGAAA CTGAGATA GTT TATCTCAG TCTAGTTTCTGATGT nrdE-2 819272 - 817113 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1089 819336 - 819305 - R 100 -17.6 -4.79752 | opp_overlap 819302 819315 CTTAACAATACAAAA TGGGAATAAAGCAA TTAA TTGCTTTATTCCCA GACTCTAATTTGCTT nrdH 819574 - 819350 - | ribonucleoside-diphosphate reductase 2, NrdH-redoxin TERM 1090 819655 - 819633 - H 79 -8.6 -3.84648 | GAATGGAAAAAGCAA GTGTTTTATT TCT AACAAAACAC AATATATAGTGTCTT TERM 1091 819655 - 819696 + H 70 -3.9 -5.10029 | opp_overlap 819655 819660, overlap 819660 ATTTCTAACAAAACA CAATATATAGTGTCTTA AAATAAAA TGAGACACTATATTTCG TTTTTTAGGGTTAGT TERM 1092 819660 - 819691 + H 78 -6.8 -4.42765 | opp_overlap 819655 819660, overlap 819655 TAACAAAACACAATA TATAGTGTCTTA AAATAAAA TGAGACACTATA TTTCGTTTTTTAGGG ptsH 819957 - 820220 + | phosphocarrier protein HPr ptsI 820225 - 821958 + | phosphoenolpyruvate-protein phosphotransferase TERM 1093 821972 - 821993 + F 100 -8.1 -5.45652 | opp_overlap 821972 GAGAATAATAAAAAA GTAGGGATT AAAA AATCTCTAC TTTTTTATTGAAAGT TERM 1094 821993 - 821972 - f 90 -5.9 -5.68489 | opp_overlap 821972 GAGAATAATAAAAAA GTAGGGATT AAAA AATCTCTAC TTTTTTATTGAAAGT TERM 1095 822098 - 822080 - f 72 -6 -4.40601 | AAGTGATAGAATAAA CCTATTAC AAT GTAAAAGG AGATTTACTTTGACA gapN 822108 - 823535 + | glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent TERM 1096 823575 - 823538 - f 100 -13.7 -2.58959 | opp_overlap 823544, overlap 823544 TGATATGAAATAGAC GTAAAACGACTCAACTA TTGT CAGTTGAGTCGTTTTAT AAACCTCTTTTACAT TERM 1097 823569 - 823544 - f 100 -12.7 -4.29981 | opp_overlap 823544, overlap 823538 GAAATAGACGTAAAA CGACTCAACTA TTGT CAGTTGAGTCG TTTTATAAACCTCTT TERM 1098 823544 - 823569 + F 100 -12 -4.39828 | opp_overlap 823544 823538 GAAATAGACGTAAAA CGACTCAACT ATTGTC AGTTGAGTCG TTTTATAAACCTCTT TERM 1099 823722 - 823736 + G 86 -6.4 -5.18355 | overlap 823723 AATTATTATAGCGAT TCTTGC TTG GCAAGG TTTTTCGTTTTTGAA TERM 1100 823723 - 823735 + G 72 -7.7 -3.69386 | overlap 823722 ATTATTATAGCGATT CTTGC TTG GCAAG GTTTTTCGTTTTTGA TERM 1101 823789 - 823768 - g 86 -6.7 -5.22481 | overlap 823759 823769 CATAAAGAAATAAAA CTTCAACAA GCTG TTGTTGAAA AAGAAATTCGCATAG TERM 1102 823788 - 823769 - g 72 -8 -3.71049 | overlap 823759 823768 ATAAAGAAATAAAAC TTCAACAA GCTG TTGTTGAA AAAGAAATTCGCATA SAG0824 823675 - 824928 + | polysaccharide deacetylase family protein TERM 1103 824955 - 824937 - T 100 -10.4 -5.7946 | opp_overlap 824937 GCCTTAATAAAAAAA GAAACAAG TTA CTTGTTTC TTTTTTTATTTTAAA TERM 1104 824937 - 824955 + T 100 -10.4 -6.09196 | opp_overlap 824937 GCCTTAATAAAAAAA GAAACAAG TTA CTTGTTTC TTTTTTTATTTTAAA SAG0825 826043 - 824961 - | DEAD-box ATP dependent DNA helicase udk 826188 - 826817 + | uridine kinase TERM 1105 826841 - 826810 - f 72 -9 -2.71497 | opp_overlap 826815, overlap 826815 826819 GCATCTTAAATGAAG CAAAATAAACACAA TGGT TTGTGTTTATTTTT TTGTTTTATATAGGA TERM 1106 826836 - 826815 - f 89 -8.9 -4.5287 | opp_overlap 826815, overlap 826810 826819 TTAAATGAAGCAAAA TAAACACAA TGGT TTGTGTTTA TTTTTTTGTTTTATA TERM 1107 826815 - 826836 + F 100 -8.9 -6.14618 | opp_overlap 826815 826810 826819 TTAAATGAAGCAAAA TAAACACAA TGGT TTGTGTTTA TTTTTTTGTTTTATA TERM 1108 826832 - 826819 - f 74 -5.3 -4.78981 | opp_overlap 826815, overlap 826815 826810 ATGAAGCAAAATAAA CACAA TGGT TTGTG TTTATTTTTTTGTTT SAG0827 826904 - 827401 + | hypothetical protein TERM 1109 827834 - 827848 + G 76 -4.3 -5.0916 | opp_overlap 827844 AAACACTTGAAGAGC CAACA GAAAA TGTTG TTTTTATATTAGCAA TERM 1110 828563 - 828543 - g 70 -2.6 -5.08011 | gap 1, overlap 828532 AAAATCGTTAAAAAA CGAAATGAG CCAA CTC-TCTCG AGCAGATCAAAGTTC dnaX 827401 - 829065 + | DNA polymerase III subunits gamma and tau TERM 1111 829102 - 829080 - f 100 -15 -4.90917 | opp_overlap 829080 AAACGTAACTAAAAA TAGTTGCCTG TTA CAGGCAACTA TTTTTTTGATAAGTT TERM 1112 829080 - 829102 + F 100 -15 -5.54894 | opp_overlap 829080 AAACGTAACTAAAAA TAGTTGCCTG TTA CAGGCAACTA TTTTTTTGATAAGTT SAG0829 829154 - 829348 + | hypothetical protein SAG0830 830264 - 829329 - | biotin--protein ligase metK 830449 - 831645 + | S-adenosylmethionine synthetase TERM 1113 831671 - 831652 - f 100 -10.8 -5.39905 | opp_overlap 831652 AGCAAATAATAAAAA GCGTAAAC GAAA GTTTACGC TTTTTTTGCTCATGA TERM 1114 831652 - 831671 + F 100 -10.8 -5.55664 | opp_overlap 831652 AGCAAATAATAAAAA GCGTAAAC GAAA GTTTACGC TTTTTTTGCTCATGA SAG0832 832166 - 834427 + | hypothetical protein SAG0833 834494 - 835039 + | hypothetical protein TERM 1115 835118 - 835068 - f 91 -12.3 -3.38603 | gap 1, opp_overlap 835073 835075 835080, overlap 835073 835075 835080 AAACATTCCTAAATA TAAGACA-TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTACTGTTTTA AATAGCTTTCTGATC TERM 1116 835073 - 835113 + F 100 -14.4 -4.22346 | gap 1, opp_overlap 835073 835068 835075 835080, overlap 835075 835080 TTCCTAAATATAAGA CA-TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTACTG TTTTAAATAGCTTTC TERM 1117 835113 - 835073 - f 91 -12.2 -3.49232 | gap 1, opp_overlap 835073 835075 835080, overlap 835068 835075 835080 TTCCTAAATATAAGA CA-TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTACTG TTTTAAATAGCTTTC TERM 1118 835110 - 835075 - f 100 -15 -3.31428 | opp_overlap 835075 835073 835080, overlap 835073 835068 835080 CCTAAATATAAGACA TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTA CTGTTTTAAATAGCT TERM 1119 835075 - 835110 + F 100 -17.2 -2.81476 | opp_overlap 835073 835068 835075 835080, overlap 835073 835080 CCTAAATATAAGACA TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTA CTGTTTTAAATAGCT TERM 1120 835080 - 835105 + F 100 -12.7 -4.55826 | opp_overlap 835080 835075 835073 835068, overlap 835075 835073 ATATAAGACATAAAA CCCTACTCATT GATT AGTGAGTAGGG TTTTACTGTTTTAAA TERM 1121 835105 - 835080 - f 95 -10.5 -4.72127 | opp_overlap 835075 835073 835080, overlap 835075 835073 835068 ATATAAGACATAAAA CCCTACTCATT GATT AGTGAGTAGGG TTTTACTGTTTTAAA SAG0834 835199 - 835327 + | hypothetical protein TERM 1122 835350 - 835371 + F 100 -7.3 -5.55769 | opp_overlap 835350 TAATCAGATAATAAA CTCCGTTTG CTTG CAGATGGAG TTTTTTGTTGTCAAA TERM 1123 835374 - 835387 + F 77 -3.9 -5.3236 | overlap 835383 CTTGCAGATGGAGTT TTTTG TTGT CAAAA TTTTTTGTAGGTTGT SAG0835 835435 - 836001 + | hypothetical protein SAG0836 835998 - 836552 + | hypothetical protein TERM 1124 837171 - 837184 + GF 70 -5.3 -4.53636 | TGGTTGGAAAAACGG TTGAC AAGG GTCAA TTTTGATTATATGCT SAG0837 836556 - 837842 + | ABC transporter, ATP-binding protein SAG0838 837797 - 838498 + | hypothetical protein SAG0839 838582 - 839262 + | TenA family transcription regulator thiD 839264 - 840061 + | phosphomethylpyrimidine kinase TERM 1125 840639 - 840652 + G 71 -4.5 -4.75219 | GGATGTCTATTAGGG GCAGT ATTG GCTGC TTTTATTGGTAGTTC thiM 840063 - 840833 + | hydroxyethylthiazole kinase TERM 1126 841017 - 841001 - g 73 -2.3 -5.29385 | AAGGTAAGGAAAAAA TTGCT ATGGCTA AGCAA CTCCAAATACTTTGT thiE 840847 - 841518 + | thiamine-phosphate pyrophosphorylase TERM 1127 842761 - 842771 + G 70 -6.8 -4.00868 | overlap 842757 GCGACAGATTTGCGT GCAG GCG CTGC TTTAGTTATCGCTGG murA-1 841645 - 842904 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1128 842918 - 842940 + F 89 -7.8 -5.06116 | opp_overlap 842918 AGTATATATAACAAA GAGTTGAGAA TAT TTCTTAGCTC TTTTCTTCTTGTTTT SAG0844 843006 - 843560 + | acetyltransferase SAG0845 843553 - 844836 + | CBS domain-containing protein map 844859 - 845719 + | methionine aminopeptidase SAG0847 845721 - 846641 + | ribonuclease BN, putative TERM 1129 846637 - 846678 + T 82 -9.7 -3.57144 | opp_overlap 846639 846642 846647, overlap 846639 846647 AATCCAAAGAAGAAA AATAAGAAAAGACAGCTCT TGTT AGAGTTGTCTTTTTTTGTC TTTAAAAATAACAAA TERM 1130 846639 - 846676 + T 90 -12.3 -3.36515 | opp_overlap 846639 846642 846647, overlap 846637 846647 TCCAAAGAAGAAAAA TAAGAAAAGACAGCTCT TGTT AGAGTTGTCTTTTTTTG TCTTTAAAAATAACA TERM 1131 846676 - 846639 - T 86 -5.7 -5.38549 | opp_overlap 846639 846637 846647, overlap 846642 846647 TCCAAAGAAGAAAAA TAAGAAAAGACAGCTCT TGTT AGAGTTGTCTTTTTTTG TCTTTAAAAATAACA TERM 1132 846673 - 846642 - T 86 -7.4 -4.74161 | opp_overlap 846639 846637 846647, overlap 846639 846647 AAAGAAGAAAAATAA GAAAAGACAGCTCT TGTT AGAGTTGTCTTTTT TTGTCTTTAAAAATA TERM 1133 846668 - 846647 - T 91 -7.3 -5.18715 | opp_overlap 846639 846637 846647, overlap 846642 846639 AGAAAAATAAGAAAA GACAGCTCT TGTT AGAGTTGTC TTTTTTTGTCTTTAA TERM 1134 846647 - 846668 + T 100 -9.5 -5.88197 | opp_overlap 846647 846642 846639, overlap 846639 846637 AGAAAAATAAGAAAA GACAGCTCT TGTT AGAGTTGTC TTTTTTTGTCTTTAA SAG0848 847113 - 846658 - | GtrA family protein SAG0849 847295 - 847804 + | hypothetical protein TERM 1135 847817 - 847837 + F 79 -3.3 -5.67283 | gap 1, opp_overlap 847817, overlap 847820 TAAATATATTATAAA GCGCGAGA CATTGA TCTCG-GC TTTTTTGTTTGGGTT TERM 1136 849064 - 849045 - g 73 -7.2 -4.03234 | gap 1 GTTGTTGTATACAAA GCAGGGGAT ATC ATCCC-TGC AGTCTTAAATGTCGT TERM 1137 849480 - 849470 - g 70 -8.2 -3.34344 | opp_overlap 849470 TCATGTGGGAAGCAA GGCG AGC CGCC TTTTATTGGAGGAAT TERM 1138 849470 - 849480 + G 88 -8.2 -4.63486 | opp_overlap 849470 TCATGTGGGAAGCAA GGCG AGC CGCC TTTTATTGGAGGAAT ligA 847944 - 849902 + | NAD-dependent DNA ligase LigA SAG0851 849914 - 850933 + | putative lipid kinase TERM 1139 852470 - 852458 - g 84 -4.9 -5.25805 | AATAAAGCTAAAAAA GATAA TGC TTATC AGATGCCTGGAATTG SAG0852 850937 - 853237 + | pullulanase, putative TERM 1140 853218 - 853276 + F 93 -11 -4.12279 | gap 3, opp_overlap 853218 853235, overlap 853218 853228 853228 853235 AGCTTTCTGTAATGA -TCCTTGATAT-CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTGTATATTAAGGAA TTTGATTTGAATTTG TERM 1141 853275 - 853218 - f 100 -14.8 -2.71011 | gap 2, opp_overlap 853218 853218 853228 853228 853235, overlap 853235 AGCTTTCTGTAATGA TCCTTGATAT-CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTGTATATTAAGGA ATTTGATTTGAATTT TERM 1142 853218 - 853275 + F 100 -17 -3.06283 | gap 2, opp_overlap 853218 853235, overlap 853218 853228 853228 853235 AGCTTTCTGTAATGA TCCTTGATAT-CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTGTATATTAAGGA ATTTGATTTGAATTT TERM 1143 853228 - 853264 + F 100 -13.4 -3.08088 | gap 1, opp_overlap 853218 853235, overlap 853218 853218 853228 853235 AATGATCCTTGATAT CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTG TATATTAAGGAATTT TERM 1144 853228 - 853262 + F 84 -11.1 -3.09452 | gap 1, opp_overlap 853218 853235, overlap 853228 853218 853218 853235 AATGATCCTTGATAT CACAAAATAACCTGAA AACA TTCAGGTTATTTT-TG TGTATATTAAGGAAT TERM 1145 853256 - 853235 - f 95 -10.3 -4.50976 | opp_overlap 853228 853228 853218 853218 853235, overlap 853218 CTTGATATCACAAAA TAACCTGAA AACA TTCAGGTTA TTTTTGTGTATATTA TERM 1146 853235 - 853256 + F 100 -10.3 -5.09685 | opp_overlap 853235 853218, overlap 853228 853228 853218 853218 CTTGATATCACAAAA TAACCTGAA AACA TTCAGGTTA TTTTTGTGTATATTA TERM 1147 853359 - 853376 + F 87 -5.6 -5.63504 | CAGATGCGTCTGTAT GAGGAA AATGTA TTCCTC TTTTTTTGTACCATT glgB 853443 - 855311 + | glycogen branching enzyme glgC 855353 - 856492 + | glucose-1-phosphate adenylyltransferase TERM 1148 856912 - 856892 - f 80 -10.5 -2.63991 | overlap 856891 856911 CTTAAGTCAAGTAAT CCACTTGCA TAA TGCAAATGG TGCGCAAGCCACCGT TERM 1149 857773 - 857761 - g 78 -6.3 -4.80882 | ATGGTAGACCAAAAA TTTGG AGA CCAAA TAGAAAACCTCATGT TERM 1150 857868 - 857882 + G 73 -5.8 -4.52873 | TGTTACGTTCTACTT TATTGA TAA TCAATA TTATTTTTATAGAGG glgA 857611 - 859041 + | glycogen synthase TERM 1151 859511 - 859490 - g 74 -8.1 -3.75461 | opp_overlap 859479, overlap 859479 GAAATGTTTAGCAAA CTGCAAACA TTGA TGTTTACAG GTGTGGCCTTCATTG atpE 859373 - 859573 + | F0F1 ATP synthase subunit C atpB 859606 - 860322 + | F0F1 ATP synthase subunit A atpF 860340 - 860837 + | F0F1 ATP synthase subunit B TERM 1152 860929 - 860910 - g 76 -5.8 -4.68724 | CCATTGAACATAAAA TTGTTGAA AAAA TCCAACAA GAAGTAGCAGCTTTA TERM 1153 861218 - 861200 - g 71 -9 -3.28712 | opp_overlap 861199 861197 GCTTTGTCTCCAGAA CAAAAAGA ACG TCTTTTTG ATATTGCTAAAACTA atpH 860837 - 861373 + | F0F1 ATP synthase subunit delta TERM 1154 861794 - 861780 - g 80 -10 -3.60296 | opp_overlap 861780 CACGCCCAGTTGAAA CACCAG CAC CTGGTG TTATGCAACGTAAAT TERM 1155 861780 - 861794 + G 78 -10 -3.30243 | opp_overlap 861780 CACGCCCAGTTGAAA CACCAG CAC CTGGTG TTATGCAACGTAAAT atpA 861389 - 862894 + | F0F1 ATP synthase subunit alpha TERM 1156 862984 - 863001 + G 74 -9.9 -2.6072 | GATTACTAGTGCGAT GCAGATG GTCT CATCTGC TAAGTTGGTTAAATC atpG 862910 - 863791 + | F0F1 ATP synthase subunit gamma atpD 863865 - 865271 + | F0F1 ATP synthase subunit beta atpC 865284 - 865697 + | F0F1 ATP synthase subunit epsilon TERM 1157 865705 - 865732 + F 95 -8.6 -5.24989 | opp_overlap 865704 865705 AAAAGTAGAAAAATG GTCTAATTAGTT TTGT GACTAATTAGGC TTTTTTAGTGTATAA TERM 1158 865920 - 865937 + G 76 -2 -5.45652 | GATAAGTATAGTTGG TGGCTA TGTGGT TAGTCA TTTTTTATTGGAAGT SAG0865 865762 - 865992 + | hypothetical protein murA-2 866055 - 867326 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SAG0867 867328 - 867519 + | hypothetical protein TERM 1159 867526 - 867555 + F 79 -8.1 -4.06903 | gap 1, opp_overlap 867526 867525 GGAAAATAGAAAGAG CCACTATAAGTTAT TTG ATG-CTTATAGTGG TTTCCTTTGAGAGTT TERM 1160 867948 - 867938 - g 70 -5.4 -4.38369 | TAATGAAATAAAGAA GGTT AAT AACC AAATTGTTCCGACTA endA 867594 - 868451 + | DNA-entry nuclease TERM 1161 868664 - 868699 + F 95 -5.3 -6.34616 | AAAACGGATGGTACC GCGTGTCAACGCTCC GATTAA GGGGTAGTGGCACGC TTTTTTTTGTTTTCA TERM 1162 868785 - 868767 - g 72 -7.5 -3.70826 | CAAAAACAATTAGAA GAGTTGA AAATA TCAACTC AAGAAAAGCTTAAAG pheS 868743 - 869783 + | phenylalanyl-tRNA synthetase subunit alpha SAG0870 869866 - 870387 + | acetyltransferase pheT 870441 - 872846 + | phenylalanyl-tRNA synthetase subunit beta TERM 1163 872910 - 872868 - T 100 -11.8 -4.59773 | gap 1, opp_overlap 872879, overlap 872851 872879 TTTTACGTTGAAAAA TAAATAAAAA-ACAGCATC AATTAA GATGCTGTTTTTTTATTTA AAATTTATAGATGTT TERM 1164 872879 - 872898 + T 100 -7.9 -5.95539 | opp_overlap 872868 872879 AAAATAAATAAAAAA CAGCATC AATTAA GATGCTG TTTTTTTATTTAAAA TERM 1165 872898 - 872879 - T 100 -7.9 -5.88476 | opp_overlap 872879, overlap 872868 AAAATAAATAAAAAA CAGCATC AATTAA GATGCTG TTTTTTTATTTAAAA SAG0872 873817 - 872915 - | hypothetical protein TERM 1166 873770 - 873792 + g 90 -7 -5.11063 | ACCTCCGCTACTGGA GCGACGATCT TCA ACATTGTCGC TTTTTCTTAGGTCAT TERM 1167 874318 - 874332 + G 70 -8.6 -2.95668 | overlap 874317 AGTTTTTGGACGATT GAAGCA AGA TGCTTC CTTTATCAGTCAATT rexB 873995 - 877228 + | exonuclease RexB TERM 1168 877714 - 877679 - g 70 -2.7 -5.1523 | gap 1, opp_overlap 877679 877682, overlap 877682 877686 TTTACAAGATAAAAA TGAGCA-AGACGTCAT AAAGA ATGAGGTCTATGCTGA TTTATTTTCTGACTA TERM 1169 879189 - 879199 + G 70 -3.2 -4.91511 | ATTGCTATTCAGGAT GTCA AAA TGGC TTTTTATCATAAAGT rexA 877218 - 880841 + | exonuclease RexA SAG0875 880854 - 881771 + | magnesium transporter CorA family protein TERM 1170 881775 - 881798 + T 100 -14 -5.96894 | opp_overlap 881775 TTAAGAAAATAAAAA TATTCGGTGC TTAC GCACCGAATA TTTTTTTATTTACCT TERM 1171 881798 - 881775 - T 100 -14 -5.62288 | opp_overlap 881775 TTAAGAAAATAAAAA TATTCGGTGC TTAC GCACCGAATA TTTTTTTATTTACCT trmE 883180 - 881804 - | tRNA modification GTPase TrmE TERM 1172 882070 - 882086 + g 74 -5.1 -4.73108 | overlap 882072 TATCGTTAATACGTT CTTCGAT TTT ATCGATG TTTTCATTTTCTAAA TERM 1173 884182 - 884169 - g 77 -8.1 -3.84246 | GCTTCAACCACTAAA CGAGC ACAA GCTCG TCGTAAACAATTAGA SAG0877 883308 - 885218 + | ABC transporter, ATP-binding protein SAG0878 885368 - 886336 + | acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit TERM 1174 887342 - 887310 - g 71 -8.6 -3.14878 | gap 1 TCTTGCAAGTGAAGA TGTTCCAGTAC-CGT ATTC ACGTGTACTTGAACA AGGAATCTTACCTGA SAG0879 886411 - 887409 + | acetoin dehydrogenase, thymine PPi dependent, E1 component, beta subunit SAG0880 887536 - 888924 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1175 889249 - 889218 - g 78 -10.2 -3.34962 | overlap 889221 GCCTATATCGGAGAA GAAGGTGAAGAAGT AGGT ACGTCATCACCTTC AGCTGATGCAACTAT TERM 1176 890020 - 890008 - g 70 -2.7 -5.11033 | overlap 890009 TAGAACTTCAAAAAA TCCTT GCT AAGAA GGGAATGAAGATTAA SAG0881 888984 - 890741 + | acetoin dehydrogenase, thymine PPi dependent, E3 component, dihydrolipoamide dehydrogenase TERM 1177 890759 - 890786 + F 80 -7.9 -4.18802 | gap 1 TTGTTTAATATATTT GAGATTG-AGCT TTTAT AGCTTCAATCTC TTTTCACGTATATAT lplA-1 890839 - 891828 + | lipoate-protein ligase A TERM 1178 891867 - 891839 - T 81 -4.5 -5.48054 | opp_overlap 891839 891840, overlap 891840 ACTAAAATCAAAAAA TCTAGTCAAAGTC TTC GCCTTTGGCTAGG TTTTTTGTATGGTTA TERM 1179 891839 - 891867 + T 100 -8.9 -5.42131 | opp_overlap 891839 891840, overlap 891840 ACTAAAATCAAAAAA TCTAGTCAAAGTC TTC GCCTTTGGCTAGG TTTTTTGTATGGTTA TERM 1180 891866 - 891840 - T 77 -8 -3.86392 | opp_overlap 891839 891840, overlap 891839 CTAAAATCAAAAAAT CTAGTCAAAGTC TTC GCCTTTGGCTAG GTTTTTTGTATGGTT TERM 1181 891840 - 891866 + T 87 -10.2 -3.83652 | opp_overlap 891840 891839, overlap 891839 CTAAAATCAAAAAAT CTAGTCAAAGTC TTC GCCTTTGGCTAG GTTTTTTGTATGGTT TERM 1182 891926 - 891907 - T 100 -7.2 -5.56568 | opp_overlap 891907 891910 ATAGTAGTAAAAAAA CAACGTTA TTGA TAACGCTG GTTTTTATATTATTC SAG0883 892721 - 891936 - | cobyric acid synthase, putative TERM 1183 892579 - 892557 - G 70 -8.6 -2.94032 | opp_overlap 892556 892557, overlap 892556 892561 892566 ATCTTCTAATGAAAC GATATCAAAT GTC ATTTGACATC CTAGTTTTTCTCCCA SAG0884 894064 - 892721 - | mur ligase family protein SAG0885 894204 - 895055 + | hypothetical protein TERM 1184 895395 - 895379 - g 70 -8.7 -3.05358 | ACAAATATGAAACCA GGGACTC ACA AAGTCCC ACTAAAGGTAGTAAA SAG0886 895058 - 896017 + | hypothetical protein SAG0887 896071 - 897423 + | phosphoglucomutase/phosphomannomutase family protein SAG0888 897546 - 897917 + | hypothetical protein SAG0889 897942 - 898322 + | hypothetical protein TERM 1185 898342 - 898313 - f 79 -8.1 -4.06419 | opp_overlap 898315 898320, overlap 898315 898320 CCTTCCTATAAATAA GATAAAATAGAGA TTTA TCTCTATTTTATT TTGGAATAAAAAGCT TERM 1186 898315 - 898340 + F 91 -10.7 -4.13767 | opp_overlap 898313 898315 898320, overlap 898320 TTCCTATAAATAAGA TAAAATAGAGA TTTA TCTCTATTTTA TTTTGGAATAAAAAG TERM 1187 898340 - 898315 - f 87 -10.7 -3.62695 | opp_overlap 898315 898320, overlap 898313 898320 TTCCTATAAATAAGA TAAAATAGAGA TTTA TCTCTATTTTA TTTTGGAATAAAAAG TERM 1188 898320 - 898335 + F 82 -6.2 -5.09259 | opp_overlap 898315 898313 898320, overlap 898315 ATAAATAAGATAAAA TAGAGA TTTA TCTCTA TTTTATTTTGGAATA TERM 1189 898335 - 898320 - f 80 -6.2 -4.86029 | opp_overlap 898320 898315, overlap 898315 898313 ATAAATAAGATAAAA TAGAGA TTTA TCTCTA TTTTATTTTGGAATA SAG0890 898414 - 899544 + | coproporphyrinogen III oxidase TERM 1190 899682 - 899692 + G 73 -5.4 -4.58395 | AAAATTAGGAATAGG CGAT GAC ATCG TTTTTAAAAGATACG SAG0891 899548 - 900285 + | hypothetical protein SAG0892 900286 - 901056 + | HAD superfamily hydrolase SAG0893 901046 - 901702 + | hypothetical protein TERM 1191 901678 - 901725 + F 100 -8.8 -5.67063 | gap 1, opp_overlap 901684 901689, overlap 901679 901684 AAAATTAAGAAAATA TA-AAAACAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTGTTTGCTA TTTTTTTATAATACA TERM 1192 901679 - 901723 + F 91 -9.5 -4.47611 | opp_overlap 901684 901689, overlap 901678 901684 AAATTAAGAAAATAT AAAAACAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTGTTTGC TATTTTTTTATAATA TERM 1193 901684 - 901718 + F 100 -13.8 -4.22283 | opp_overlap 901684 901689, overlap 901679 901678 AAGAAAATATAAAAA CAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTG TTTGCTATTTTTTTA TERM 1194 901718 - 901684 - f 100 -11.6 -5.34632 | opp_overlap 901679 901678 901684, overlap 901689 AAGAAAATATAAAAA CAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTG TTTGCTATTTTTTTA TERM 1195 901713 - 901689 - f 86 -5.7 -5.40873 | opp_overlap 901684 901679 901678, overlap 901684 AATATAAAAACAAAA TGCAAGCCTTA TAA TAGCGCTTGCA TTTTGTTTGCTATTT TERM 1196 901781 - 901795 + F 86 -11.4 -2.84171 | opp_overlap 901781, overlap 901778 CAATGACATAAAAAA GCACCG AAT CGGTGC TCACTTTTTCAAGCT TERM 1197 901795 - 901781 - f 100 -11.4 -5.42131 | opp_overlap 901781 901778 CAATGACATAAAAAA GCACCG AAT CGGTGC TCACTTTTTCAAGCT TERM 1198 903290 - 903270 - g 72 -4.1 -5.00884 | overlap 903257 903283 ATTTTCTTGAAAAAA TCAAGAA TGAAGAT TTCTTGA GAAAACAAAGGACCT TERM 1199 903308 - 903296 - g 73 -6.3 -4.3739 | GATTTCTTGAGAAAA CAAAG GAC CTTTG ATAATGGCTCAATTC SAG0894 902090 - 906202 + | hypothetical protein SAG0895 906204 - 907073 + | lipoyl-binding domain-containing protein SAG0896 907085 - 907411 + | oxidoreductase, putative SAG0897 907398 - 908063 + | hypothetical protein SAG0898 908175 - 908426 + | hypothetical protein SAG0899 908439 - 908612 + | hypothetical protein SAG0900 908847 - 909017 + | hypothetical protein SAG0901 909099 - 909482 + | hypothetical protein SAG0902 909460 - 909597 + | hypothetical protein SAG0903 909601 - 909735 + | hypothetical protein TERM 1200 909839 - 909863 + F 100 -10.1 -5.58179 | TGTGCTGTTATTATG CTAGGACATCA TTG TGGTGTTCTAG TTTTTTGTTATACTG SAG0904 910104 - 910274 + | hypothetical protein TERM 1201 910310 - 910326 + F 88 -7.3 -5.0538 | opp_overlap 910310 TATTAATATAGTTAA GGAGTGT CCA ATACTCC TTTTTTGAAATACAG ndk 910407 - 910823 + | nucleoside diphosphate kinase lepA 910959 - 912791 + | GTP-binding protein LepA TERM 1202 912825 - 912850 + F 84 -5.6 -5.42975 | gap 1, opp_overlap 912825 TTTATCTATTTTAAA GTAACTT-AGC TTCGT GCTTAAGTTAC TTTTTCTTTGTCTGC TERM 1203 913223 - 913209 - g 73 -2.1 -5.33866 | overlap 913210 GAAAGTCATAAAAAA CGCAA GGGTG TTGCA GGGGTTGACTTTCCA SAG0907 913038 - 915671 + | protein of unknown function/lipoprotein, putative TERM 1204 915724 - 915692 - f 74 -9.3 -3.12856 | opp_overlap 915697 915717 915718, overlap 915697 TACAGAGCTAATATA TAAAATCCTTCAAGA ATT TCTTGGAGGATTTTG CATTTATATGCTAAA TERM 1205 915697 - 915719 + F 100 -11.4 -4.41177 | opp_overlap 915697 915692, overlap 915717 915718 AGCTAATATATAAAA TCCTTCAAGA ATT TCTTGGAGGA TTTTGCATTTATATG TERM 1206 915719 - 915697 - f 90 -9.2 -4.68545 | opp_overlap 915697 915717 915718, overlap 915692 AGCTAATATATAAAA TCCTTCAAGA ATT TCTTGGAGGA TTTTGCATTTATATG TERM 1207 915717 - 915742 + F 72 -3.3 -5.20328 | opp_overlap 915697 915692, overlap 915697 915718 915736 CAAGAATTTCTTGGA GGATTTTGCAT TTAT ATGCTAAATCA TTTATTTTTTTAGAA TERM 1208 915736 - 915746 + F 72 -2.6 -5.41746 | overlap 915718 915717 TTTGCATTTATATGC TAAA TCA TTTA TTTTTTTAGAAAATT SAG0908 915819 - 916430 + | HD domain-containing protein TERM 1209 916834 - 916845 + G 71 -4.4 -4.84017 | opp_overlap 916834 TTGGAATGATAATCA GAGA GCGG TCTC TTTTTATGAAAAATT SAG0909 916439 - 916903 + | acetyltransferase SAG0910 916903 - 917337 + | methionine sulfoxide reductase B TERM 1210 917338 - 917376 + F 86 -11.3 -2.94099 | opp_overlap 917341 917343 917345, overlap 917345 TCACTTTTTGATTAA TAAGAGACGACTTAAGG GTATA TCTTAAGTCGTTTTTTA TGTATGGTAAAAAGA TERM 1211 917369 - 917345 - f 74 -8.7 -3.29142 | opp_overlap 917338 917345, overlap 917343 917341 TTGATTAATAAGAGA CGACTTAAG GGTATAT CTTAAGTCG TTTTTTATGTATGGT TERM 1212 917345 - 917369 + F 100 -9.4 -5.43414 | opp_overlap 917345 917343 917341, overlap 917338 TTGATTAATAAGAGA CGACTTAAGG GTATA TCTTAAGTCG TTTTTTATGTATGGT TERM 1213 918230 - 918213 - g 78 -4.1 -5.42265 | TGAAATCAGAAAAAA GCCCTCT TCAA AGAGAAC TTGATCGGTTGACCA TERM 1214 919681 - 919695 + G 71 -4.3 -4.84642 | overlap 919690 TCCGTCGGCATTCTT CCTTT TTTCT AAAGG TTTTATTCCTTTACC SAG0911 917489 - 920281 + | cation transporter E1-E2 family ATPase SAG0912 920281 - 921384 + | hypothetical protein TERM 1215 921489 - 921436 - T 100 -24.5 -4.41897 | opp_overlap 921436 921450, overlap 921450 AATAAACTAGCAAAA TAGCACACTAAAAATACTACTCA TATTATGC TGAGTAGTATTTTTAGTGTGCTA TTTGATGAAGTTATT TERM 1216 921436 - 921489 + T 100 -24.5 -3.77607 | opp_overlap 921436 921450, overlap 921450 AATAAACTAGCAAAA TAGCACACTAAAAATACTACTCA TATTATGC TGAGTAGTATTTTTAGTGTGCTA TTTGATGAAGTTATT TERM 1217 921475 - 921450 - T 80 -6.3 -4.83269 | opp_overlap 921436 921450, overlap 921436 ATAGCACACTAAAAA TACTACTCA TATTATGC TGAGTAGTA TTTTTAGTGTGCTAT TERM 1218 921450 - 921475 + T 80 -6.3 -4.83269 | opp_overlap 921450 921436, overlap 921436 ATAGCACACTAAAAA TACTACTCA TATTATGC TGAGTAGTA TTTTTAGTGTGCTAT cat 922143 - 921505 - | chloramphenicol acetyltransferase TERM 1219 922352 - 922389 + H 100 -20.3 -2.83905 | opp_overlap 922352, overlap 922354 922356 922363 GTATGAACAAAGAAA CATACTTAAAACCTTGT AATA ACAAGGTTTTAAGTATG TATAGTAAGTTATGG TERM 1220 922389 - 922352 - H 100 -20.3 -4.70887 | opp_overlap 922352 922354 922356 922363 GTATGAACAAAGAAA CATACTTAAAACCTTGT AATA ACAAGGTTTTAAGTATG TATAGTAAGTTATGG TERM 1221 922354 - 922387 + H 100 -17.1 -2.96538 | opp_overlap 922352, overlap 922352 922356 922363 ATGAACAAAGAAACA TACTTAAAACCTTGT AATA ACAAGGTTTTAAGTA TGTATAGTAAGTTAT TERM 1222 922356 - 922385 + H 100 -15.3 -3.03214 | opp_overlap 922352, overlap 922354 922352 922363 GAACAAAGAAACATA CTTAAAACCTTGT AATA ACAAGGTTTTAAG TATGTATAGTAAGTT TERM 1223 922363 - 922378 + H 80 -7.6 -4.27259 | opp_overlap 922352, overlap 922356 922354 922352 GAAACATACTTAAAA CCTTGT AATA ACAAGG TTTTAAGTATGTATA TERM 1224 923160 - 923172 + G 76 -3.3 -5.30155 | ATTGGGATTATCATC GGAAG TGT CATCC TTTTTTGGTTAGTCA SAG0914 922854 - 923465 + | hypothetical protein TERM 1225 923663 - 923643 - T 83 -10.5 -3.21416 | opp_overlap 923643, overlap 923647 CATTTGTACTACTAA GCAACAAGA CGC TCCTGTTGC TTCTCTTTATTCAAG TERM 1226 923643 - 923663 + T 79 -8.3 -3.96841 | opp_overlap 923643 923647 CATTTGTACTACTAA GCAACAAGA CGC TCCTGTTGC TTCTCTTTATTCAAG SAG0915 924856 - 923639 - | Tn916, transposase TERM 1227 924600 - 924612 + g 72 -4.1 -4.93877 | TGTTTTGCGTAAAGC TGGCA GAG TGTCA TTTTCTTTCCTACAA SAG0916 925141 - 924938 - | Tn916, excisionase SAG0917 925125 - 925376 + | Tn916 hypothetical protein TERM 1228 925596 - 925543 - TR 74 -6.1 -4.44667 | gap 1, opp_overlap 925543, overlap 925539 925544 TGGTGGAATAACAAA CCTCCCTGTTCG-GGAAGCGTG GAATGGTTTAG CACGCTTCCACGAAAGGAGAGA GGATATTACTTAATT SAG0918 925832 - 925602 - | Tn916 hypothetical protein SAG0919 926302 - 925829 - | Tn916 hypothetical protein TERM 1229 926426 - 926393 - R 95 -9.1 -5.1615 | opp_overlap 926388 926393 TGAATAGCCAAAAAA GCATATAAACAGA TTTATTTC TCTGTTTACATGC TTCTGTTATTCTATC TERM 1230 926469 - 926458 - R 72 -5.8 -4.44245 | ATATGATTTATAAAA CCAC ATTG GTGG ACGTACTTATCTATT SAG0920 926551 - 926480 - | Tn916 hypothetical protein SAG0921 926756 - 927109 + | Tn916, transcriptional regulator, putative TERM 1231 927131 - 927184 + T 100 -13.5 -3.72141 | gap 1, opp_overlap 927119 927136 927148, overlap 927132 927133 927148 GAATCCATACATAAC GG-AAAGAGCCGATAAAATGAGATTG TAT TAATCTCATTTTATCGGCTCTGCGTC TTTGCGTCTGGCTCT TERM 1232 927132 - 927182 + T 100 -15 -3.4404 | opp_overlap 927119 927136 927148, overlap 927131 927133 927148 AATCCATACATAACG GAAAGAGCCGATAAAATGAGATTG TAT TAATCTCATTTTATCGGCTCTGCG TCTTTGCGTCTGGCT TERM 1233 927133 - 927181 + T 100 -18.5 -2.65942 | opp_overlap 927136 927148, overlap 927132 927131 927148 ATCCATACATAACGG AAAGAGCCGATAAAATGAGATTG TAT TAATCTCATTTTATCGGCTCTGC GTCTTTGCGTCTGGC TERM 1234 927178 - 927136 - T 100 -23.9 -3.84394 | opp_overlap 927133 927132 927131 927148, overlap 927148 CATACATAACGGAAA GAGCCGATAAAATGAGATT GTATT AATCTCATTTTATCGGCTC TGCGTCTTTGCGTCT TERM 1235 927148 - 927166 + T 78 -6.8 -4.41548 | opp_overlap 927136 927148, overlap 927133 927132 927131 AAAGAGCCGATAAAA TGAGATTG TAT TAATCTCA TTTTATCGGCTCTGC TERM 1236 927166 - 927148 - T 74 -6.1 -4.43221 | opp_overlap 927148 927133 927132 927131, overlap 927136 AAAGAGCCGATAAAA TGAGATT GTATT AATCTCA TTTTATCGGCTCTGC SAG0922 927354 - 927169 - | Tn916 hypothetical protein tetM 929374 - 927455 - | tetracycline resistance protein TERM 1237 928351 - 928361 + g 78 -4 -5.4251 | GTAGTAGAGGGTGCG GATT TTC AATC TTTTTTCTCTGTGGC SAG0924 929476 - 929390 - | Tn916, tetM leader peptide TERM 1238 929444 - 929415 - G 100 -16.7 -4.90296 | opp_overlap 929415 AAAAGGGCATAAAAA TCCCAGTGATAAA TACT TTTATCACTGGGA TTTTTATGCATAACC TERM 1239 929415 - 929444 + g 100 -16.7 -4.87665 | opp_overlap 929415 AAAAGGGCATAAAAA TCCCAGTGATAAA TACT TTTATCACTGGGA TTTTTATGCATAACC TERM 1240 929742 - 929707 - R 100 -12.2 -4.7254 | gap 1, opp_overlap 929707 929706 929701, overlap 929709 ATTTTTTATCAAAAA GAGTACATGATTACAAA GTA TCTGTAATCATGTAC-C AATATTTGTTATTTT TERM 1241 929741 - 929709 - R 100 -15.9 -3.98256 | opp_overlap 929707 929706 929701, overlap 929707 TTTTTATCAAAAAGA GTACATGATTACAAA GTA TCTGTAATCATGTAC CAATATTTGTTATTT SAG0925 930683 - 929751 - | Tn916 hypothetical protein SAG0926 931681 - 930680 - | Tn916, NLP/P60 family protein SAG0927 933855 - 931678 - | hypothetical protein TERM 1242 932019 - 932043 + g 78 -8.7 -3.6707 | opp_overlap 932019 TCGGTCTTTCATGAA CAGAAGAAGCA GGC TGTTTTTTCTG TTTGACCTGTTCCAT TERM 1243 932055 - 932081 + g 78 -5.8 -4.7339 | TCTGTTTGACCTGTT CCATTTCAGAGC GAC GCTTCGCAATGG TTTTTCGCCTTTGTT TERM 1244 933794 - 933759 - G 88 -5.6 -5.45802 | gap 1, opp_overlap 933758 933759, overlap 933753 TGGCTAAAAGAAAAA TGGCAATCACAAGTG TGAAAGC CACT-GTCATTGCCA CTTTACCTAGACGTT SAG0929 936794 - 936288 - | Tn916 hypothetical protein TERM 1245 936532 - 936504 - GR 100 -11.7 -3.91434 | opp_overlap 936495 AAAGTATTTGAGAAA TGCTCCCTCTATC ATG GAAAGAGGGGGCA AGTTGCCAAGTATCA TERM 1246 936731 - 936704 - GR 91 -7.1 -5.24129 | gap 1, overlap 936706 TCCTTTCATAAAAAA TA-GGGGTAGCT GATTG AGCCACCCCGTA AAATAGAAAATCTGC TERM 1247 936728 - 936706 - GR 100 -11.3 -4.25873 | overlap 936704 CTTTCATAAAAAATA GGGGTAGCT GATTG AGCCACCCC GTAAAATAGAAAATC TERM 1248 936767 - 936742 - GR 80 -6.2 -4.89567 | CCGTAAAATAGAAAA TCTGCCAGTA GTAATG TACCGACAGA TTTAATAGACGATTT SAG0930 937266 - 936769 - | Tn916 hypothetical protein TERM 1249 937326 - 937376 + r 83 -7 -4.86731 | ACTTCGTTTGGTGTA CCATTCCTTTGCGGAACATAAG AAAACCA CTTATATTCCACAAAAGAACGG TTTTATTTAAGCACC SAG0931 937604 - 937383 - | Tn916 hypothetical protein SAG0932 938852 - 937647 - | Tn916, transcriptional regulator, putative TERM 1250 938291 - 938311 + g 70 -8.3 -3.34404 | opp_overlap 938293, overlap 938265 938289 ACTTTTCAGTGAGTA CAGGGATAT TTA AAATCCCTG TCTTATCGTTAATGG TERM 1251 938969 - 938989 + r 83 -10.4 -3.09834 | CCTGTCGATTTGTAC CCCCCTGT TAGAT ACGGGGGG TTAAGTGCTGGCGTG TERM 1252 939024 - 939082 + r 83 -10.3 -3.11966 | gap 2, opp_overlap 939028, overlap 939031 939033 TTGCCACACCAGCCA GCAAGATCAGTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGACTG-TC-TGC TGTTGGATAACTTTT TERM 1253 939079 - 939028 - R 100 -13 -3.1994 | gap 1, opp_overlap 939024 939031 939033 CACACCAGCCAGCAA GATCAGTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGACTG-TC TGCTGTTGGATAACT TERM 1254 939031 - 939077 + r 100 -13.6 -2.92522 | opp_overlap 939028, overlap 939024 939033 ACCAGCCAGCAAGAT CAGTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGACTG TCTGCTGTTGGATAA TERM 1255 939033 - 939075 + r 83 -10.4 -3.0119 | opp_overlap 939028, overlap 939031 939024 CAGCCAGCAAGATCA GTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGAC TGTCTGCTGTTGGAT SAG0933 940415 - 939030 - | Tn916, FtsK/SpoIIIE family protein SAG0934 940830 - 940444 - | Tn916 hypothetical protein SAG0935 941160 - 940846 - | Tn916 hypothetical protein SAG0936 941302 - 941183 - | Tn916 hypothetical protein TERM 1256 941317 - 941291 - G 100 -10.3 -5.41746 | AATCGGGTAAAAAAA TAGACACCTCA TTTTT TGAAGTGTCTA CCTATTAAATATTCA TERM 1257 941516 - 941537 + r 100 -9.5 -5.28561 | opp_overlap 941516 941518 ATAAAAATAAAAAAA GGTTGGAGA TATA TCTCCAATC TTTTTATTGTATATT TERM 1258 941537 - 941516 - R 100 -7.3 -6.23317 | opp_overlap 941516, overlap 941518 ATAAAAATAAAAAAA GGTTGGAGA TATA TCTCCAATC TTTTTATTGTATATT TERM 1259 941535 - 941518 - R 72 -8.5 -3.1344 | opp_overlap 941516, overlap 941516 AAAAATAAAAAAAGG TTGGAGA TATA TCTCCAA TCTTTTTATTGTATA SAG0938 943402 - 943034 - | GntR family transcriptional regulator TERM 1260 943871 - 943916 + G 75 -9.2 -3.1706 | gap 1, opp_overlap 943874, overlap 943874 CTAAATTTATTGACA GAACATCTTGA-AGGGGTGCA ATTGA TTCTTCCCTATCAAGATGTTC TTGATCAGCTCAATT TERM 1261 945426 - 945450 + G 70 -8.6 -2.98823 | opp_overlap 945430, overlap 945436 CAGGTTTTACGCTAG GCAAGTCTGA TTTGC TCAGACGTGC TATGTCTAAGAAAAA TERM 1262 946208 - 946198 - g 73 -5.4 -4.68103 | opp_overlap 946198 TCAAGTTCAAGAAAA TAGC GAA GCTA CTATTTTAGTTCAGC dnaE 943547 - 946651 + | DNA polymerase III DnaE pfkA 946732 - 947754 + | 6-phosphofructokinase pyk 947803 - 949305 + | pyruvate kinase TERM 1263 949320 - 949350 + F 100 -10.7 -5.53079 | opp_overlap 949320 ATTTTTGAATTCAAA CCTATTATTTAAG AATAC CTTAAATAATGGG TTTTTTATATGTTTT TERM 1264 949350 - 949320 - f 80 -9.2 -3.75332 | opp_overlap 949320 ATTTTTGAATTCAAA CCTATTATTTAAGA ATA CCTTAAATAATGGG TTTTTTATATGTTTT SAG0942 949476 - 950033 + | signal peptidase I, putative TERM 1265 950039 - 950062 + T 95 -9 -5.00895 | opp_overlap 950039 TTCAGAGTAGTAAAA GAATGGTATT ATTT GATACCATTC TTTTTATGTAATAAA TERM 1266 950062 - 950039 - T 83 -8.3 -4.33274 | opp_overlap 950039 TTCAGAGTAGTAAAA GAATGGTAT TATTTG ATACCATTC TTTTTATGTAATAAA SAG0943 950190 - 950047 - | hypothetical protein glmS 950302 - 952116 + | D-fructose-6-phosphate amidotransferase TERM 1267 952197 - 952174 - f 93 -8.3 -5.16472 | overlap 952193 AAAAATTGTAAAAAA GCCTATTTT TGAAGG AAAATAGGC CACGCCAAACGCATG SAG0945 952293 - 953426 + | IS1548 transposase phnA 953605 - 953934 + | phnA protein TERM 1268 953942 - 953963 + F 93 -9.5 -4.71061 | AAAAATAGCTTTCAG GCAATTGGC AACG GTCAATTGC TTTTTGAATATGACT SAG0947 954069 - 954710 + | amino acid ABC transporter, permease protein TERM 1269 954779 - 954762 - g 81 -7.1 -4.59773 | TGCTATGGGCAAAAA GAAATCT TTAA AGATTTC AATCTGACTGTAGAA SAG0948 954720 - 955349 + | amino acid ABC transporter, ATP-binding protein SAG0949 955366 - 956196 + | amino acid ABC transporter, amino acid-binding protein TERM 1270 956227 - 956191 - T 100 -19.1 -3.83502 | opp_overlap 956194 956199, overlap 956194 956199 GATGTTTATAGTAAA GAATAAAAGACTAGGAA TTT CTCCTAGTCTTTTATTC TACGAAAAAATTAAA TERM 1271 956224 - 956194 - T 100 -15 -4.04806 | opp_overlap 956194 956199, overlap 956191 956199 GTTTATAGTAAAGAA TAAAAGACTAGGAA TTT CTCCTAGTCTTTTA TTCTACGAAAAAATT TERM 1272 956194 - 956224 + T 100 -14.3 -3.29043 | opp_overlap 956194 956191 956199, overlap 956199 GTTTATAGTAAAGAA TAAAAGACTAGGA ATTTC TCCTAGTCTTTTA TTCTACGAAAAAATT TERM 1273 956219 - 956199 - T 100 -10.5 -5.02606 | opp_overlap 956194 956199, overlap 956194 956191 TAGTAAAGAATAAAA GACTAGGAA TTT CTCCTAGTC TTTTATTCTACGAAA TERM 1274 956199 - 956219 + T 100 -9.8 -4.77165 | opp_overlap 956199 956194 956191, overlap 956194 TAGTAAAGAATAAAA GACTAGGA ATTTC TCCTAGTC TTTTATTCTACGAAA TERM 1275 956273 - 956243 - T 88 -8.5 -4.45175 | opp_overlap 956245 956250 956271, overlap 956250 TACGAAAAAATTAAA TAAAAAACATCGA TATAT CCGATGTTTTCTA GGTTAATTAACCAAG TERM 1276 956266 - 956250 - T 87 -4.4 -5.74086 | opp_overlap 956250 956245, overlap 956243 AAATTAAATAAAAAA CATCGA TATAT CCGATG TTTTCTAGGTTAATT TERM 1277 956296 - 956321 + T 79 -6.8 -4.63044 | TAACCAAGTTTAGTT GCAAGACGTG CTTTAT CGCGGCTTGC TTTGTTTGTGTGAAT rpsT 956513 - 956280 - | 30S ribosomal protein S20 coaA 957502 - 956582 - | pantothenate kinase TERM 1278 957010 - 957020 + g 70 -6.8 -4.13973 | AAATTGGGATTTTCG CGGT TAT ACCG TTCTTTATAGTATCT TERM 1279 957914 - 957904 - g 73 -3.2 -5.11063 | ATTAGCTAAGAAAAA TGCA ACA CGCA ATGGAGTAGTAGTTG SAG0952 957608 - 958198 + | hypothetical protein cdd 958524 - 958913 + | cytidine deaminase TERM 1280 958944 - 958956 + F 75 -4.9 -5.01732 | opp_overlap 958939, overlap 958931 CTTTTAAGCATTTAG CTTAA ATA TTAAG TTTTTTAGGAGGGTT SAG0954 958978 - 960027 + | protein of unknown function/lipoprotein, putative TERM 1281 960075 - 960040 - f 100 -14.4 -3.65201 | gap 1, opp_overlap 960051, overlap 960041 960051 TAATATCTTTAAGAA CTTTCAAAAAAGCGATT AGA AATCGCTTTTTTGAA-G CTGAGATAAACTTAT TERM 1282 960075 - 960041 - f 100 -14.6 -2.78639 | opp_overlap 960051, overlap 960040 960051 AATATCTTTAAGAAC TTTCAAAAAAGCGATT AGA AATCGCTTTTTTGAAG CTGAGATAAACTTAT TERM 1283 960065 - 960051 - f 95 -8.6 -5.06103 | opp_overlap 960051, overlap 960040 960041 AGAACTTTCAAAAAA GCGATT AGA AATCGC TTTTTTGAAGCTGAG TERM 1284 960051 - 960065 + F 95 -8.6 -5.03314 | opp_overlap 960040 960041 960051 AGAACTTTCAAAAAA GCGATT AGA AATCGC TTTTTTGAAGCTGAG TERM 1285 960144 - 960086 - f 91 -10.7 -4.06491 | gap 1, opp_overlap 960087 960103, overlap 960087 960103 TGAAGCTGAGATAAA CTTATATCTCAGTAAAATCCATCAGTCG TTAA CGATTGGTGGATTTTACTGAACTATAA- ATGAATTTTTCTGAA TERM 1286 960144 - 960087 - f 100 -16.7 -3.03412 | opp_overlap 960087 960103, overlap 960086 960103 GAAGCTGAGATAAAC TTATATCTCAGTAAAATCCATCAGTCG TTAA CGATTGGTGGATTTTACTGAACTATAA ATGAATTTTTCTGAA TERM 1287 960087 - 960145 + F 100 -12.9 -2.88667 | gap 1, opp_overlap 960086 960087 960103, overlap 960103 GAAGCTGAGATAAAC -TTATATCTCAGTAAAATCCATCAGTCG TTAA CGATTGGTGGATTTTACTGAACTATAAA TGAATTTTTCTGAAA TERM 1288 960128 - 960103 - f 70 -6.1 -4.27617 | opp_overlap 960103 960087, overlap 960086 960087 TATATCTCAGTAAAA TCCATCAGTCG TTAA CGATTGGTGGA TTTTACTGAACTATA TERM 1289 960103 - 960128 + F 95 -10.5 -4.27617 | opp_overlap 960086 960087 960103, overlap 960087 TATATCTCAGTAAAA TCCATCAGTCG TTAA CGATTGGTGGA TTTTACTGAACTATA TERM 1290 961415 - 961405 - g 81 -5.4 -5.1963 | GGTAACCAACAAAAA GCAA TTA TTGC TCGTGAAGTGGATCG SAG0955 960172 - 961707 + | sugar ABC transporter, ATP-binding protein SAG0956 961700 - 962761 + | sugar ABC transporter, permease protein, putative SAG0957 962763 - 963719 + | sugar ABC transporter, permease protein, putative TERM 1291 963758 - 963717 - f 80 -7.6 -4.25388 | opp_overlap 963718 963727, overlap 963727 TATATTAAAACGAAA TAAATAAAAAGAAACTAG TATAAG CTAGTTTCTTTTTATTGT TTGTGAATTTGTGAA TERM 1292 963718 - 963757 + F 100 -11.8 -4.04319 | opp_overlap 963717 963727, overlap 963727 ATATTAAAACGAAAT AAATAAAAAGAAACTAGT ATAA GCTAGTTTCTTTTTATTG TTTGTGAATTTGTGA TERM 1293 963727 - 963748 + F 100 -8.1 -5.42164 | opp_overlap 963717 963727, overlap 963718 CGAAATAAATAAAAA GAAACTAGT ATAA GCTAGTTTC TTTTTATTGTTTGTG TERM 1294 963748 - 963727 - f 100 -7.4 -5.5454 | opp_overlap 963727 963718, overlap 963717 CGAAATAAATAAAAA GAAACTAG TATAAG CTAGTTTC TTTTTATTGTTTGTG TERM 1295 963856 - 963834 - f 81 -2 -5.9362 | TAAAATATAAAAAAA TAGAAAATTG AGT CATTATTCTA GTAAGAGTTTGTGAA nox-2 963924 - 965294 + | NADH oxidase TERM 1296 965304 - 965334 + T 77 -8.4 -3.8901 | opp_overlap 965291 965309, overlap 965309 GATTAATTTAAAATT AAAAAGGTTAAGCG AAA TGCTTAGCCTTTTA TTTCATCCTTTAACA TERM 1297 965329 - 965309 - T 76 -5.4 -5.10154 | opp_overlap 965304 965309 ATTTAAAATTAAAAA GGTTAAGC GAAAT GCTTAGCC TTTTATTTCATCCTT TERM 1298 965309 - 965329 + T 91 -8.3 -4.96388 | opp_overlap 965309, overlap 965304 ATTTAAAATTAAAAA GGTTAAGCG AAA TGCTTAGCC TTTTATTTCATCCTT TERM 1299 965399 - 965378 - T 93 -8.1 -5.29846 | opp_overlap 965378 AACGGCAAAGAAAAA GCTAAGATA TTCC TATCCTAGC TTTTTTTCAACTATG TERM 1300 965378 - 965399 + T 86 -5.9 -5.45726 | opp_overlap 965378 AACGGCAAAGAAAAA GCTAAGATA TTCC TATCCTAGC TTTTTTTCAACTATG ldh 966404 - 965415 - | L-lactate dehydrogenase TERM 1301 966178 - 966208 + g 100 -9.1 -5.48825 | gap 1 ACAACAAGGTCAGCA TCTGCGCAGTCTGC ATAA GTAG-CTGCGTAGA TTTTTTTAGGTGATG TERM 1302 966283 - 966263 - G 80 -11.3 -3.23216 | opp_overlap 966261 CTTCAGCATCACCAA CAGCTTTAT CAA ATAAAGCTG GGATTTCAATGATAC TERM 1303 966511 - 966500 - H 71 -3 -5.15117 | TAAAATGTGAAAAAA TTTG CAAA CAAA TTGAAATATCATAGA TERM 1304 968691 - 968664 - g 75 -9.2 -3.27525 | TCGCTTCAAAGTGAA CGCTGTACGT AATATGGG ACGCACAGCG ACTGGGGTACGAGGC gyrA 966643 - 969102 + | DNA gyrase subunit A srtA 969109 - 969852 + | sortase SrtA TERM 1305 970102 - 970118 + G 75 -8.7 -3.54459 | opp_overlap 970088 GGTAGGCCGAATTGG CCACGTG AAG CATGTGG TTTACGACACCTTGC SAG0962 969868 - 970281 + | glyoxylase family protein TERM 1306 970281 - 970316 + F 100 -15 -3.78312 | opp_overlap 970282 970286 970290, overlap 970282 970286 970290 AGAATTACATGAATA ATAAACAAAGTTGCGT GGAT ACGCAACTTTGTTTAA TTTACTGAATAATTT TERM 1307 970315 - 970282 - f 100 -18.5 -3.79849 | opp_overlap 970282 970281 970286 970290, overlap 970286 970290 GAATTACATGAATAA TAAACAAAGTTGCGT GGAT ACGCAACTTTGTTTA ATTTACTGAATAATT TERM 1308 970282 - 970315 + F 100 -18.5 -2.86264 | opp_overlap 970282 970286 970290, overlap 970281 970286 970290 GAATTACATGAATAA TAAACAAAGTTGCGT GGAT ACGCAACTTTGTTTA ATTTACTGAATAATT TERM 1309 970286 - 970311 + F 100 -14.9 -4.10953 | opp_overlap 970286 970282 970290, overlap 970282 970281 970290 TACATGAATAATAAA CAAAGTTGCGT GGAT ACGCAACTTTG TTTAATTTACTGAAT TERM 1310 970311 - 970286 - f 100 -14.9 -4.5032 | opp_overlap 970282 970281 970286 970290, overlap 970282 970290 TACATGAATAATAAA CAAAGTTGCGT GGAT ACGCAACTTTG TTTAATTTACTGAAT TERM 1311 970290 - 970307 + F 93 -9.9 -4.63675 | opp_overlap 970290 970286 970282, overlap 970286 970282 970281 TGAATAATAAACAAA GTTGCGT GGAT ACGCAAC TTTGTTTAATTTACT TERM 1312 970307 - 970290 - f 100 -9.9 -4.78597 | opp_overlap 970286 970282 970281 970290, overlap 970286 970282 TGAATAATAAACAAA GTTGCGT GGAT ACGCAAC TTTGTTTAATTTACT TERM 1313 970458 - 970468 + G 76 -3.2 -5.34857 | AAAAAGCTATTGTTT GCAG GCC TTGC TTTTATTTTATTTAC TERM 1314 970741 - 970731 - g 93 -4 -6.09196 | GTTAAAATAAAAAAA TTAG GGT CTAA CGATACCTTAGCAGT TERM 1315 971143 - 971129 - g 78 -5.8 -4.77986 | GGAAACATTGAAAAA TTATCA TCT TGATAA CGCTGTAACGGAAAA SAG0963 970434 - 971396 + | hypothetical protein TERM 1316 971423 - 971404 - T 100 -10.8 -5.4833 | opp_overlap 971404 GTAGTTAATAAAAAA GTCTAGCT TATA AGCTAGAC TTTTTTTACCCTAAA TERM 1317 971404 - 971423 + T 100 -10.8 -5.44119 | opp_overlap 971404 GTAGTTAATAAAAAA GTCTAGCT TATA AGCTAGAC TTTTTTTACCCTAAA SAG0964 972586 - 971459 - | Na+/H+ exchanger family protein SAG0965 972846 - 973229 + | IS1381 transposase protein A SAG0966 973262 - 973651 + | IS1381 transposase protein B TERM 1318 973724 - 973680 - T 100 -15.3 -4.22554 | opp_overlap 973691, overlap 973691 CTATTCAAGAAATAA GAGTAAAAAAACTTAGCTACT TAA AGTAGCTAAGTTTTTATTCCC ACTCAACAGTTGCAG TERM 1319 973691 - 973713 + T 100 -13.6 -5.07486 | opp_overlap 973691 973680 ATAAGAGTAAAAAAA CTTAGCTACT TAA AGTAGCTAAG TTTTTATTCCCACTC TERM 1320 973713 - 973691 - T 100 -13.6 -5.6473 | opp_overlap 973691, overlap 973680 ATAAGAGTAAAAAAA CTTAGCTACT TAA AGTAGCTAAG TTTTTATTCCCACTC guaA 975279 - 973717 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1321 974345 - 974357 + g 70 -2.7 -5.15526 | AAAACGTACACGAAC TCATT TCC GATGA TTTTTCGTTTTCTCT SAG0968 975492 - 976190 + | GntR family transcriptional regulator gid 976304 - 977638 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1322 977647 - 977674 + F 90 -9.3 -4.70453 | CTATTGATATATTCA TTTGACTTTGC CAACAA GCAAGGTCAAA TTTTCTATATTGATT SAG0970 977716 - 978459 + | acetyltransferase SAG0971 978592 - 979440 + | protein of unknown function/lipoprotein, putative TERM 1323 979438 - 979484 + F 100 -10.5 -5.82316 | opp_overlap 979444 979448, overlap 979444 GATCAACCTGTTTGG TAAAAATAAATAAGCATGGTC AATTC GATCATGCTTATTTATTTCGA TTTTTTTTGAGTAAT TERM 1324 979478 - 979444 - f 100 -12.4 -4.56597 | opp_overlap 979438 979444, overlap 979448 CCTGTTTGGTAAAAA TAAATAAGCATGGTCA ATT CGATCATGCTTATTTA TTTCGATTTTTTTTG TERM 1325 979444 - 979478 + F 100 -13.9 -4.1441 | opp_overlap 979444 979448, overlap 979438 CCTGTTTGGTAAAAA TAAATAAGCATGGTC AATTC GATCATGCTTATTTA TTTCGATTTTTTTTG TERM 1326 979474 - 979448 - f 93 -8.8 -4.85782 | opp_overlap 979444 979438, overlap 979444 TTTGGTAAAAATAAA TAAGCATGGTCA ATT CGATCATGCTTA TTTATTTCGATTTTT SAG0973 980127 - 981089 + | nisin-resistance protein, putative SAG0974 981115 - 981867 + | ABC transporter, ATP-binding protein SAG0975 981869 - 983824 + | ABC transporter, permease protein, putative TERM 1327 983849 - 983828 - f 89 -8.8 -4.67234 | opp_overlap 983828 ATTGAACGCTAAAAA GGATTGGT TATTTT ACCAATCC TTTTGCATTAATAGA TERM 1328 983828 - 983849 + F 87 -8.8 -4.30014 | opp_overlap 983828 ATTGAACGCTAAAAA GGATTGGT TATTTT ACCAATCC TTTTGCATTAATAGA SAG0976 983934 - 984602 + | DNA-binding response regulator SAG0977 984599 - 985537 + | sensor histidine kinase TERM 1329 985529 - 985576 + T 100 -17 -3.36415 | gap 1, opp_overlap 985531 985535 985539, overlap 985535 985539 ACTGCTGTTTCTATA CATAAATAAAGTTATGTAAAATA AAA TA-TTTACATAACTTTATTTATG TTACTATAGTTTATC TERM 1330 985574 - 985531 - T 100 -13.8 -2.87132 | gap 1, opp_overlap 985529 985535 985539, overlap 985535 985539 TGCTGTTTCTATACA TAAATAAAGTTATGTAAA-AT AAA ATATTTACATAACTTTATTTA TGTTACTATAGTTTA TERM 1331 985535 - 985570 + T 93 -10.2 -4.2586 | gap 1, opp_overlap 985535 985531 985539, overlap 985529 985539 GTTTCTATACATAAA TAAAGTTATGTAAAATA AAA TA-TTTACATAACTTTA TTTATGTTACTATAG TERM 1332 985570 - 985535 - T 90 -10.2 -4.12532 | gap 1, opp_overlap 985529 985535 985539, overlap 985531 985539 GTTTCTATACATAAA TAAAGTTATGTAAA-AT AAA ATATTTACATAACTTTA TTTATGTTACTATAG TERM 1333 985566 - 985539 - T 79 -6.6 -4.65722 | gap 1, opp_overlap 985535 985529 985539, overlap 985535 985531 CTATACATAAATAAA GTTATGTAAA-AT AAA ATATTTACATAAC TTTATTTATGTTACT TERM 1334 985539 - 985566 + T 79 -6.6 -4.69415 | gap 1, opp_overlap 985539 985535 985531, overlap 985535 985529 CTATACATAAATAAA GTTATGTAAAATA AAA TA-TTTACATAAC TTTATTTATGTTACT xerS 986650 - 985580 - | site-specific tyrosine recombinase XerS SAG0979 987103 - 988764 + | ABC transporter, substrate-binding protein TERM 1335 988797 - 988767 - T 100 -9.8 -4.90002 | opp_overlap 988772, overlap 988772 TAAGACAGAATAAAA GAAAAGCGTTAGGA TAT TTCTAGCGCTTTTC TATACCAAAAGTAAC TERM 1336 988772 - 988792 + T 85 -8.3 -4.52589 | opp_overlap 988772 988767 CAGAATAAAAGAAAA GCGTTAGGA TAT TTCTAGCGC TTTTCTATACCAAAA TERM 1337 988792 - 988772 - T 74 -3.9 -5.31091 | opp_overlap 988772, overlap 988767 CAGAATAAAAGAAAA GCGTTAGGA TAT TTCTAGCGC TTTTCTATACCAAAA SAG0980 989570 - 988797 - | hypothetical protein SAG0981 990246 - 989560 - | satD protein TERM 1338 990321 - 990280 - R 100 -12.7 -2.87468 | opp_overlap 990280 990286 990292, overlap 990286 990292 GTCTATTATAGCAGA CAAAAATAAAAATGTCTAT TTAA ATAGACATTTTTATTTGCG TTTCTTCTTAGCTTT TERM 1339 990280 - 990321 + r 95 -10.5 -4.49364 | opp_overlap 990280 990286 990292, overlap 990286 990292 GTCTATTATAGCAGA CAAAAATAAAAATGTCTAT TTAA ATAGACATTTTTATTTGCG TTTCTTCTTAGCTTT TERM 1340 990315 - 990286 - R 100 -12.5 -5.02502 | opp_overlap 990280 990286 990292, overlap 990280 990292 TATAGCAGACAAAAA TAAAAATGTCTAT TTAA ATAGACATTTTTA TTTGCGTTTCTTCTT TERM 1341 990286 - 990315 + r 100 -12.5 -3.95772 | opp_overlap 990286 990280 990292, overlap 990280 990292 TATAGCAGACAAAAA TAAAAATGTCTAT TTAA ATAGACATTTTTA TTTGCGTTTCTTCTT TERM 1342 990309 - 990292 - R 100 -7.1 -5.71295 | opp_overlap 990286 990280 990292, overlap 990286 990280 AGACAAAAATAAAAA TGTCTAT TTAA ATAGACA TTTTTATTTGCGTTT TERM 1343 990292 - 990309 + r 100 -7.1 -5.34381 | opp_overlap 990292 990286 990280, overlap 990286 990280 AGACAAAAATAAAAA TGTCTAT TTAA ATAGACA TTTTTATTTGCGTTT ffh 991878 - 990313 - | signal recognition particle protein Ffh TERM 1344 990726 - 990749 + g 76 -7.5 -4.0896 | overlap 990718 TTTCTCTCTCTTCTG GAGTCATTG ATGACA CAATGGCTC TTTTGCGAGCAATTT TERM 1345 991554 - 991580 + g 76 -8 -4.14615 | opp_overlap 991532 991560, overlap 991555 TACCAGCACCTTGTA GACCAACCATCA TAA TGATGGTTGGAA TTTTAGGGGATTTTT TERM 1346 991555 - 991579 + g 83 -11.5 -3.07685 | opp_overlap 991532 991560, overlap 991554 ACCAGCACCTTGTAG ACCAACCATCA TAA TGATGGTTGGA ATTTTAGGGGATTTT TERM 1347 991574 - 991560 - G 71 -8.6 -3.2614 | opp_overlap 991555 991554 CACCTTGTAGACCAA CCATCA TAA TGATGG TTGGAATTTTAGGGG SAG0983 992228 - 991896 - | hypothetical protein TERM 1348 992293 - 992328 + r 82 -7.8 -4.43571 | gap 1, opp_overlap 992284 992293 992299, overlap 992294 992299 AGACCACTTTAAAAT TTAAAAGGTTAGGACTA ACA TGG-CCTAACCTTTTAC TTTTGGTAGTTTTAT TERM 1349 992294 - 992327 + r 88 -11.3 -3.24516 | gap 1, opp_overlap 992284 992293 992299, overlap 992293 992299 GACCACTTTAAAATT TAAAAGGTTAGGACTA ACA TGG-CCTAACCTTTTA CTTTTGGTAGTTTTA TERM 1350 992299 - 992322 + r 79 -6.8 -4.70319 | gap 1, opp_overlap 992293 992299, overlap 992294 992293 CTTTAAAATTTAAAA GGTTAGGACTA ACA TGG-CCTAACC TTTTACTTTTGGTAG TERM 1351 992322 - 992299 - R 78 -6.7 -4.4267 | opp_overlap 992299 992294 992293, overlap 992293 CTTTAAAATTTAAAA GGTTAGGAC TAACAT GGCCTAACC TTTTACTTTTGGTAG SAG0984 993630 - 992317 - | sensor histidine kinase CiaH ciaR 994294 - 993614 - | DNA-binding response regulator CiaR TERM 1352 994445 - 994418 - R 80 -7.2 -4.66625 | opp_overlap 994418 ACACAGACAAAGAAA TAGAGATTGA ATAATCCA TCAATCTCTA TTTGAGTTTATTAGA TERM 1353 994418 - 994445 + r 72 -7.2 -3.93262 | opp_overlap 994418 ACACAGACAAAGAAA TAGAGATTGA ATAATCCA TCAATCTCTA TTTGAGTTTATTAGA pepN 997005 - 994456 - | aminopeptidase N TERM 1354 997105 - 997066 - R 100 -19.7 -4.37886 | opp_overlap 997075, overlap 997075 GTATGGGCTAGAAAA GATAGAAAAGCTGTAAC AAGATA GTTACAGCTTTTCTATC GCACGAACTATACTT TERM 1355 997096 - 997075 - R 93 -8.8 -4.80289 | opp_overlap 997075, overlap 997066 AGAAAAGATAGAAAA GCTGTAAC AAGATA GTTACAGC TTTTCTATCGCACGA TERM 1356 997075 - 997096 + r 88 -8.8 -4.52589 | opp_overlap 997075 997066 AGAAAAGATAGAAAA GCTGTAAC AAGATA GTTACAGC TTTTCTATCGCACGA phoU 997804 - 997151 - | phosphate transport system regulatory protein PhoU SAG0988 998596 - 997838 - | phosphate ABC transporter, ATP-binding protein PstB, putative TERM 1357 997878 - 997896 + g 71 -4.6 -4.88163 | TCTTCAGTTTCTTTA TGTTTAGG ATT CATAAACA TTTCTTTTGTATTGC SAG0989 999411 - 998608 - | phosphate ABC transporter, ATP-binding protein PstB, putative SAG0990 1000310 - 999423 - | phosphate ABC transporter, permease protein PstA, putative TERM 1358 1000256 - 1000279 + g 73 -9 -3.35467 | opp_overlap 1000255, overlap 1000262 TTGTAACGATGATAG CTGCAATACT ATAG AGTATTGTAG TTGCTAATTTGTCAG SAG0991 1001217 - 1000300 - | phosphate ABC transporter, permease protein TERM 1359 1001111 - 1001097 - G 74 -5 -4.86293 | CAACAAAAATCAAAA TCATCG CAA CAATGA AGACGATTAGGGCAA SAG0992 1002123 - 1001263 - | phosphate ABC transporter, phosphate-binding protein TERM 1360 1002262 - 1002273 + r 71 -3 -5.27769 | AAGTTTCTAGGGTTT GAAA AGTA TTTC TTTTTCCTTTTTTAT SAG0993 1003618 - 1002308 - | NOL1/NOP2/sun family protein TERM 1361 1003351 - 1003372 + g 79 -10.9 -2.87132 | CTTTCATTCCTTCTT GTGGTTCAG CAAT CTGAGCCAC TATCTGAGCAGCAGG TERM 1362 1003658 - 1003677 + r 74 -6.5 -4.46617 | opp_overlap 1003658, overlap 1003653 GGGCGTGCAAAAAAA CCTTCTA TTTAAT TAGAAGG TTTTAAGTTTATTTT TERM 1363 1003677 - 1003658 - R 88 -6.5 -5.40072 | opp_overlap 1003653 1003658 GGGCGTGCAAAAAAA CCTTCTA TTTAAT TAGAAGG TTTTAAGTTTATTTT SAG0994 1004450 - 1003686 - | inositol monophosphatase family protein SAG0995 1004721 - 1004440 - | hypothetical protein spxA 1005127 - 1004714 - | transcriptional regulator Spx SAG0997 1006102 - 1005170 - | bifunctional riboflavin kinase/FMN adenylyltransferase truB 1006999 - 1006115 - | tRNA pseudouridine synthase B TERM 1364 1006930 - 1006969 + g 76 -6.6 -4.50761 | gap 1, overlap 1006929 TATGTAATATCTTTC GAAGCTTGAAT-ACAGCAT CGT GTGATGTCATTCCAGCTTC TTTCTTTAAATTAAT TERM 1365 1007062 - 1007041 - R 80 -7.3 -4.68511 | opp_overlap 1007042, overlap 1007042 GGTAACACAAAGAAA GGAGCGTAA AAAC TTACGCTCT TTTGGTATAGTGCTA TERM 1366 1007061 - 1007042 - R 87 -10.8 -3.40022 | opp_overlap 1007042, overlap 1007041 GTAACACAAAGAAAG GAGCGTAA AAAC TTACGCTC TTTTGGTATAGTGCT TERM 1367 1007042 - 1007061 + r 100 -10.8 -4.37502 | opp_overlap 1007041 1007042 GTAACACAAAGAAAG GAGCGTAA AAAC TTACGCTC TTTTGGTATAGTGCT SAG0999 1007522 - 1007091 - | acetyltransferase SAG1000 1008806 - 1007535 - | hypothetical protein SAG1001 1009430 - 1008840 - | hypothetical protein TERM 1368 1009521 - 1009498 - R 84 -3.3 -5.83211 | gap 1, opp_overlap 1009498 TACTAAAATAAAAAA TAAGCTT-TC AGTAA GAGAAGCTTA TTTAGATTAAATCTA SAG1002 1010415 - 1009537 - | protease, putative SAG1003 1013151 - 1010521 - | permease, putative SAG1004 1013864 - 1013163 - | ABC transporter, ATP-binding protein TERM 1369 1013993 - 1013975 - R 71 -5.3 -4.58283 | TAATTTTTTTAAAAA TCTGAGC TAAAC ACTCAGA TTCCACTTTATTTAA topA 1016121 - 1014001 - | DNA topoisomerase I TERM 1370 1016060 - 1016073 + g 100 -3.1 -6.25242 | ATAACTAGATTTTTT TTAGC AGTA GCTGA TTTTTTTTTACTTGT dprA 1017058 - 1016216 - | DprA/SMF protein, putative DNA processing factor TERM 1371 1017186 - 1017161 - R 93 -6.9 -5.40474 | opp_overlap 1017164, overlap 1017144 1017164 ATTTTTTCAAAAAAA TAAGACTAGGA TTTT TCCTAGCCTTT GACAAAAAATTAACG TERM 1372 1017183 - 1017164 - R 93 -8.6 -4.79949 | opp_overlap 1017164, overlap 1017161 TTTTCAAAAAAATAA GACTAGGA TTTT TCCTAGCC TTTGACAAAAAATTA SAG1007 1018224 - 1017196 - | iron-compound ABC transporter, iron-compound-binding protein SAG1008 1019047 - 1018286 - | iron compound ABC transporter, ATP-binding protein SAG1009 1020018 - 1019044 - | iron compound ABC transporter, permease protein SAG1010 1020977 - 1020015 - | iron compound ABC transporter, permease protein TERM 1373 1020605 - 1020583 - G 70 -6.4 -4.12456 | ATATTATCCTTAAAA GTAATCATTT TTA AAATGGTTAC AAAAAGAAGCGATCC SAG1011 1021764 - 1021216 - | acetyltransferase rnhB 1022546 - 1021785 - | ribonuclease HII rbgA 1023384 - 1022533 - | ribosomal biogenesis GTPase TERM 1374 1023436 - 1023447 + r 77 -3 -5.52347 | overlap 1023444 GTCTACATCTATTTG TTAG AGGT CTAA TTTTTTAGTTTTATT TERM 1375 1023444 - 1023455 + r 71 -3 -5.16681 | overlap 1023436 CTATTTGTTAGAGGT CTAA TTTT TTAG TTTTATTCTTTTTCA SAG1014 1024232 - 1023660 - | hypothetical protein TERM 1376 1024360 - 1024389 + r 100 -16.7 -3.43492 | opp_overlap 1024360, overlap 1024363 TTTTTAGTAGAAAAA TAACCTCGAATGA TACT TCATTCGAGGTTA TTGTGATAACTGTAA TERM 1377 1024389 - 1024360 - R 100 -16.7 -4.91109 | opp_overlap 1024360 1024363 TTTTTAGTAGAAAAA TAACCTCGAATGA TACT TCATTCGAGGTTA TTGTGATAACTGTAA TERM 1378 1024363 - 1024386 + r 100 -14 -3.8512 | opp_overlap 1024360, overlap 1024360 TTAGTAGAAAAATAA CCTCGAATGA TACT TCATTCGAGG TTATTGTGATAACTG SAG1015 1025917 - 1024433 - | carbon starvation protein CstA, putative TERM 1379 1025942 - 1025960 + r 74 -6.8 -4.33165 | overlap 1025943 TCCTAAAAATTTTTT TGCTTAAT TTT ATTAAGCG TTTTCATGACTTTAG TERM 1380 1025943 - 1025959 + r 71 -8.1 -3.19176 | overlap 1025942 CCTAAAAATTTTTTT GCTTAAT TTT ATTAAGC GTTTTCATGACTTTA SAG1016 1026807 - 1026073 - | response regulator TERM 1381 1026123 - 1026137 + g 81 -7.2 -4.63486 | TTACATTTGCTCTGC TAACAG GAA CTGTTA TTTTATTACAAAGGT TERM 1382 1026355 - 1026345 - G 70 -5.4 -4.41494 | overlap 1026353 TAGCTTCAATCAAAA GGAT ATC ATCC GCCGACACCAGATAG SAG1017 1028558 - 1026819 - | sensor histidine kinase, putative TERM 1383 1028894 - 1028874 - R 93 -6.2 -5.55769 | TTTGATAATAAAAAA GTGAGAAC AATAG ATTCTCAC TCACAATTAGCCTGG SAG1018 1029216 - 1029094 - | putative lipoprotein SAG1019 1029858 - 1029739 - | hypothetical protein SAG1020 1030785 - 1030102 - | putative lipoprotein TERM 1384 1030583 - 1030548 - G 84 -8 -4.58419 | opp_overlap 1030549 ATAAAATATAAGAAA TTTTTTTTAAAAAATT AGAT ATTTTTTTAAAAAAAA GCGAAATAATTATTG SAG1021 1031194 - 1030871 - | hypothetical protein TERM 1385 1031588 - 1031564 - R 75 -8.1 -3.60899 | opp_overlap 1031571 CAAAAGTGAAATGAA TCATTAACTTT TCT AAAGTTAATAA AGAATGGAATTAGCT SAG1022 1032075 - 1031542 - | hypothetical protein SAG1023 1032233 - 1032087 - | hypothetical protein SAG1024 1032781 - 1032230 - | putative lipoprotein SAG1025 1033235 - 1032786 - | hypothetical protein TERM 1386 1033572 - 1033610 + r 79 -6.9 -4.57569 | opp_overlap 1033572 1033577, overlap 1033577 AGTTCTTATGAAAGA TAAAAGGGTCTTAGATT TTGAC AAGCTAAGAACCTTTTG TTTTTCAAAGAATAA TERM 1387 1033577 - 1033605 + r 77 -4.6 -5.26119 | opp_overlap 1033572 1033577, overlap 1033572 TTATGAAAGATAAAA GGGTCTTAGATT TTGAC AAGCTAAGAACC TTTTGTTTTTCAAAG TERM 1388 1033605 - 1033577 - R 70 -4.6 -4.82128 | opp_overlap 1033577 1033572, overlap 1033572 TTATGAAAGATAAAA GGGTCTTAGATT TTGAC AAGCTAAGAACC TTTTGTTTTTCAAAG TERM 1389 1035254 - 1035266 + r 72 -3.5 -5.13473 | overlap 1035257 TTGATATCTTTTATT TATTT CAA AAATA TTTTTTGCATCTCCT SAG1027 1035507 - 1035253 - | hypothetical protein SAG1028 1036118 - 1035528 - | hypothetical protein SAG1029 1036437 - 1036132 - | hypothetical protein TERM 1390 1036365 - 1036385 + g 71 -8.9 -3.18429 | AAATTAATAGTCCAG CTGTTGCGG TAC CCGCAGCCG TTCCTACAACTTTTG SAG1030 1037480 - 1036566 - | hypothetical protein SAG1031 1037845 - 1037483 - | hypothetical protein SAG1032 1038207 - 1037950 - | hypothetical protein SAG1033 1042150 - 1038221 - | FtsK/SpoIIIE family protein TERM 1391 1039063 - 1039090 + g 75 -9.2 -3.14132 | opp_overlap 1039061 1039065 CACGTTTGATTAATC CACGTCCTGGAA TATC TTCCATGATGTG TTGGTGACGACCGAC TERM 1392 1041415 - 1041401 - G 73 -8.6 -3.29096 | opp_overlap 1041381, overlap 1041382 TTGATTAACCATCAA TTGGAG TTG CTCCAA TACTAAACCTCGTGG SAG1034 1042628 - 1042461 - | hypothetical protein SAG1035 1043909 - 1042635 - | hypothetical protein SAG1036 1044151 - 1043909 - | hypothetical protein SAG1037 1044608 - 1044135 - | hypothetical protein SAG1038 1047628 - 1044617 - | phage infection protein, putative TERM 1393 1047684 - 1047664 - R 100 -14.1 -4.64676 | opp_overlap 1047659 1047664, overlap 1047645 TTATTTTCAACAAAA TAGGAAGGC TTT GCCTTCCTA TTCACTTATAGACTA TERM 1394 1047664 - 1047684 + r 100 -14.1 -3.2375 | opp_overlap 1047645 1047664, overlap 1047659 TTATTTTCAACAAAA TAGGAAGGC TTT GCCTTCCTA TTCACTTATAGACTA SAG1039 1048000 - 1047710 - | hypothetical protein SAG1040 1048899 - 1048117 - | hypothetical protein TERM 1395 1048627 - 1048644 + g 79 -7.1 -4.44667 | opp_overlap 1048629 CAATACAACTGAATC GATATCT GTTA AGATATC TTTCTTATTAAAAGC SAG1041 1049219 - 1048896 - | hypothetical protein carB 1052528 - 1049346 - | carbamoyl phosphate synthase large subunit TERM 1396 1051564 - 1051550 - G 75 -8.6 -3.52204 | opp_overlap 1051549 1051558 1051562, overlap 1051546 CTAGTGTCAAACCAA CAGCTA TCT TAGCTG CTAATTTAGCAATTG carA-1 1053635 - 1052559 - | carbamoyl phosphate synthase small subunit TERM 1397 1052679 - 1052698 + g 71 -5 -4.57209 | overlap 1052680 GGCAGGATAGTATTT ATGTCGAA CACC TTCGACAG TTTTATCATTAATCT TERM 1398 1052680 - 1052697 + g 70 -8.5 -3.33241 | overlap 1052679 GCAGGATAGTATTTA TGTCGAA CACC TTCGACA GTTTTATCATTAATC TERM 1399 1052733 - 1052711 - G 75 -9.3 -3.21416 | CAGTTTTATCATTAA TCTCTTCAT GTGTA ATGAAGAGA GCCTCAGGGAAATCT pyrB 1054572 - 1053649 - | aspartate carbamoyltransferase catalytic subunit TERM 1400 1054627 - 1054608 - R 95 -9.3 -5.28176 | TTTAGCTAGAAAAAA GCCTCCT AAAACA AGGAGGC TCTGCAAAATAGTAA TERM 1401 1054666 - 1054637 - R 74 -7.3 -4.08216 | opp_overlap 1054637 GGAGGCTCTGCAAAA TAGTAAGCTAGAT AGGG AACTAACTTACTA TTTGTTAACGCAATT pyrC 1056029 - 1054737 - | dihydroorotase TERM 1402 1054854 - 1054866 + g 71 -4.8 -4.55997 | overlap 1054848 1054842 GTTGCTGGATTTGGA GGCA AATTC TGCC TTTATTATTCTCTCT pyrE 1056670 - 1056041 - | orotate phosphoribosyltransferase pyrF 1057384 - 1056683 - | orotidine 5'-phosphate decarboxylase TERM 1403 1057460 - 1057443 - R 100 -11.3 -5.39721 | opp_overlap 1057443 GTATGACACAAAAAA CCTTGCC TGAG GGCAAGG TTTCATAAAAAGTTA TERM 1404 1057443 - 1057460 + r 93 -11.3 -3.737 | opp_overlap 1057443 GTATGACACAAAAAA CCTTGCC TGAG GGCAAGG TTTCATAAAAAGTTA SAG1048 1058829 - 1057597 - | hypothetical protein SAG1049 1060410 - 1058869 - | ABC transporter, ATP-binding protein TERM 1405 1060469 - 1060449 - R 88 -6.9 -5.15634 | opp_overlap 1060449 GAGGTTATTAAAAAA CTCATAGAG ACA CTCTACAAG TTTTTAAATTAGTAC asd 1062125 - 1061049 - | aspartate-semialdehyde dehydrogenase TERM 1406 1062256 - 1062287 + r 78 -9 -3.39856 | opp_overlap 1062256 1062262, overlap 1062262 TAACCAACCTAATTA TAAAAAGGAATC TCGTATCC GATTCCTTTTTA TTGATTGCATATATC TERM 1407 1062287 - 1062256 - R 73 -9 -2.80398 | opp_overlap 1062256 1062262, overlap 1062262 TAACCAACCTAATTA TAAAAAGGAATC TCGTATCC GATTCCTTTTTA TTGATTGCATATATC TERM 1408 1062262 - 1062281 + r 72 -3.6 -5.1963 | opp_overlap 1062262 1062256, overlap 1062256 ACCTAATTATAAAAA GGAATC TCGTATCC GATTCC TTTTTATTGATTGCA SAG1052 1062478 - 1062335 - | cell wall surface anchor family protein, putative TERM 1409 1063121 - 1063099 - g 100 -13.6 -5.09895 | opp_overlap 1063099 TATTTATGCAAAAAA GAAAGAACCA AAC TGGTTCTTTC TTTTTTGCTTTTCAG TERM 1410 1063099 - 1063121 + G 100 -13.6 -5.46698 | opp_overlap 1063099 TATTTATGCAAAAAA GAAAGAACCA AAC TGGTTCTTTC TTTTTTGCTTTTCAG SAG1053 1063089 - 1063181 + | hypothetical protein cls 1064990 - 1063395 - | cardiolipin synthetase TERM 1411 1064704 - 1064684 - G 71 -9 -3.18849 | opp_overlap 1064684, overlap 1064678 1064682 TGTACATTAGGAACA TCGCCCCT AGTAA AGGGGCAA TCATTACCAATATTA fhs 1066779 - 1065109 - | formate--tetrahydrofolate ligase TERM 1412 1066499 - 1066514 + g 79 -3.2 -5.4477 | CCTAAAGAAGGTTCG CGAAGA GCAA TCATCG TTTTTTTACCAATTT lplA-2 1067887 - 1066868 - | lipoate-protein ligase A TERM 1413 1067830 - 1067818 - G 82 -7.7 -4.45168 | TTTGTAAAATATAAA CTTGC ATG GCAAG TGCAATCGCACCGTC SAG1057 1068792 - 1067914 - | hypothetical protein SAG1058 1069579 - 1068761 - | hypothetical protein TERM 1414 1069429 - 1069407 - GR 87 -10 -3.93236 | opp_overlap 1069406 1069409 CACCAATGTGACAAA TACCTATCTT CTA AAGACAGGTA CTCTTGACTAATGTT SAG1059 1069904 - 1069572 - | glycine cleavage system H protein, putative SAG1060 1070919 - 1069933 - | luciferase family protein TERM 1415 1070383 - 1070373 - G 73 -3.2 -5.1417 | CCATAAAAGGAAAAA CACC GAA GGTA AAGCCTAAGCCAAGT SAG1061 1072115 - 1070916 - | oxidoreductase, FMN-binding SAG1062 1072956 - 1072108 - | hypothetical protein SAG1063 1073098 - 1073784 + | phosphopantothenate--cysteine ligase SAG1064 1073777 - 1074319 + | phosphopantothenoylcysteine decarboxylase SAG1065 1074365 - 1074937 + | hypothetical protein TERM 1416 1074968 - 1074941 - f 70 -4 -4.946 | opp_overlap 1074944, overlap 1074942 1074943 ATTAAACATTAAAAA CTGGCCAGGAAG AAAT CTTCCTGGCTTT TCTTACTTATATTTT TERM 1417 1074967 - 1074942 - f 71 -7.5 -3.55133 | opp_overlap 1074944, overlap 1074941 1074943 TTAAACATTAAAAAC TGGCCAGGAAG AAAT CTTCCTGGCTT TTCTTACTTATATTT TERM 1418 1074966 - 1074943 - f 82 -11 -2.71995 | opp_overlap 1074944, overlap 1074942 1074941 TAAACATTAAAAACT GGCCAGGAAG AAAT CTTCCTGGCT TTTCTTACTTATATT TERM 1419 1074944 - 1074965 + F 100 -14.5 -4.82756 | opp_overlap 1074943 1074942 1074941 AAACATTAAAAACTG GCCAGGAAG AAAT CTTCCTGGC TTTTCTTACTTATAT TERM 1420 1076253 - 1076226 - g 70 -2.7 -5.07486 | opp_overlap 1076250 GAGTTTGAAGAAAAA CATAACCACAC CTATAT GTTTGGTTTTG AAGAAAGCTTCGGAT pgm 1075047 - 1076765 + | phosphoglucomutase TERM 1421 1076836 - 1076782 - f 77 -9.3 -3.32483 | opp_overlap 1076789 1076831, overlap 1076800 AAAAAAAGCTAGGAA CTGAACTGCACCCCAAAAGTTAGAC AAAAA ATCTAACGATTGGGGTGCTTTTCTG ATGAAATTAAGTTAT TERM 1422 1076789 - 1076829 + F 100 -12.7 -4.47328 | opp_overlap 1076782 1076800 GCTAGGAACTGAACT GCACCCCAAAAGTTAGA CAAAAAA TCTAACGATTGGGGTGC TTTTCTGATGAAATT SAG1067 1076837 - 1077373 + | IS861, transposase OrfA TERM 1423 1078173 - 1078141 - g 100 -12.2 -4.74084 | opp_overlap 1078141, overlap 1078130 AAAGCAAAACTAAAA GGACTTAGTCCTGT GCAAT ACAGAACTAAATCC TTCACTTAAAATAAA SAG1068 1077349 - 1078182 + | IS861, transposase OrfB SAG1069 1078461 - 1078264 - | hypothetical protein SAG1070 1080208 - 1078475 - | ABC transporter, ATP-binding/permease protein TERM 1424 1079407 - 1079385 - G 73 -6.2 -4.44797 | TGACCAACACTAAAA GCCCCTGACA TAA TGCGAAGGGC ACCAATCCCAGCTAA SAG1071 1081930 - 1080209 - | ABC transporter, ATP-binding/permease protein TERM 1425 1081501 - 1081488 - G 80 -6.7 -4.74103 | GGGCTAATGGAAAAA GCCAT AATT ATGGC ACCAAAAACAATAAT SAG1072 1082544 - 1081942 - | hypothetical protein SAG1073 1083523 - 1082546 - | hypothetical protein TERM 1426 1082904 - 1082922 + g 86 -6.8 -5.08169 | AAAGAAAAATCATCT TTGTTGAA ATT TTCAGCAA TTTTTTGAGCTGTCT TERM 1427 1083430 - 1083466 + g 74 -9.5 -3.00298 | overlap 1083432 AGTCATCAATCCTTG GAGTTAGGGTTAGCGGA GTA TCTGATAGCACTAACTC TGTGTCGTTAGGAGA glyA 1084784 - 1083528 - | serine hydroxymethyltransferase SAG1075 1085427 - 1084876 - | Sua5/YciO/YrdC/YwlC family protein SAG1076 1086295 - 1085465 - | HemK family modification methylase TERM 1428 1085887 - 1085908 + g 91 -6.5 -5.40474 | opp_overlap 1085890 AAATGTCACTAGCTA GAACATCCC AAGA GGGGCGTTC TTTTTTTAGAGAAAT prfA 1087374 - 1086295 - | peptide chain release factor 1 TERM 1429 1087007 - 1086993 - G 75 -5.6 -4.78107 | GATCACCAGCAAAAA GCGCTG CTT CATCGC CACCAGCAGCACCAC tdk 1087978 - 1087409 - | thymidine kinase xylM 1088116 - 1088298 + | 4-oxalocrotonate tautomerase SAG1080 1088417 - 1088274 - | hypothetical protein TERM 1430 1088303 - 1088338 + g 81 -11.4 -2.71422 | opp_overlap 1088303 1088306 1088311, overlap 1088311 AGAAAAAATAAGAAA TAGTAAAAGAGGTTAC CCAG GTAACCTCTTTTGATA GTCTTTGTAAGCATA TERM 1431 1088338 - 1088303 - G 100 -9.2 -4.86216 | opp_overlap 1088303 1088311, overlap 1088306 1088311 AGAAAAAATAAGAAA TAGTAAAAGAGGTTAC CCAG GTAACCTCTTTTGATA GTCTTTGTAAGCATA TERM 1432 1088335 - 1088306 - G 79 -10.9 -2.96101 | opp_overlap 1088303 1088311, overlap 1088303 1088311 AAAAATAAGAAATAG TAAAAGAGGTTAC CCAG GTAACCTCTTTTG ATAGTCTTTGTAAGC TERM 1433 1088311 - 1088330 + g 95 -10.8 -4.37067 | opp_overlap 1088311 1088306 1088303, overlap 1088303 TAAGAAATAGTAAAA GAGGTTAC CCAG GTAACCTC TTTTGATAGTCTTTG TERM 1434 1088330 - 1088311 - G 95 -10.8 -4.55446 | opp_overlap 1088303 1088311, overlap 1088306 1088303 TAAGAAATAGTAAAA GAGGTTAC CCAG GTAACCTC TTTTGATAGTCTTTG TERM 1435 1088550 - 1088526 - g 83 -7.1 -4.86385 | ATGCTCAAAAACAAA TCCGAGAGGTC ATA GAACTCTTGGA GCTCTACAAAAATCG SAG1081 1088447 - 1089385 + | ApbE family protein TERM 1436 1089907 - 1089919 + G 74 -4.1 -5.10208 | CTAGATGCTATCTTT GATGA TTT TCGTC TTTTTGTTAAGATTA SAG1082 1089403 - 1090005 + | hypothetical protein SAG1083 1090029 - 1091264 + | hypothetical protein TERM 1437 1091277 - 1091314 + F 89 -7.9 -4.946 | gap 1, overlap 1091267 1091278 TAATCTCCTCGCTTT TGAGGATC-TGATACCTT AAA AAGATATCAAGATCCTCC TTTTTAATATTTAAT TERM 1438 1091278 - 1091313 + F 90 -11.4 -3.55133 | gap 1, overlap 1091267 1091277 AATCTCCTCGCTTTT GAGGATC-TGATACCTT AAA AAGATATCAAGATCCTC CTTTTTAATATTTAA SAG1084 1091363 - 1092151 + | formate/nitrite transporter family protein TERM 1439 1092147 - 1092192 + T 100 -18.1 -3.44229 | opp_overlap 1092149 1092160, overlap 1092149 1092160 AAACTTCTCACCATG AATAAAAGAAAAACTGAGTAA TAAA TTACTCAGTTTTTCTTTTATA TTCTCATCATGAAAT TERM 1440 1092149 - 1092190 + T 100 -20.7 -3.29273 | opp_overlap 1092149 1092160, overlap 1092147 1092160 ACTTCTCACCATGAA TAAAAGAAAAACTGAGTAA TAAA TTACTCAGTTTTTCTTTTA TATTCTCATCATGAA TERM 1441 1092190 - 1092149 - T 100 -20.7 -3.21218 | opp_overlap 1092147 1092149 1092160, overlap 1092160 ACTTCTCACCATGAA TAAAAGAAAAACTGAGTAA TAAA TTACTCAGTTTTTCTTTTA TATTCTCATCATGAA TERM 1442 1092160 - 1092179 + T 100 -9.4 -5.60556 | opp_overlap 1092149 1092160, overlap 1092149 1092147 TGAATAAAAGAAAAA CTGAGTAA TAAA TTACTCAG TTTTTCTTTTATATT TERM 1443 1092179 - 1092160 - T 100 -9.4 -5.62288 | opp_overlap 1092160 1092149 1092147, overlap 1092149 TGAATAAAAGAAAAA CTGAGTAA TAAA TTACTCAG TTTTTCTTTTATATT pbuX 1093524 - 1092250 - | xanthine permease xpt 1094105 - 1093524 - | xanthine phosphoribosyltransferase guaC 1095344 - 1094361 - | guanosine 5'-monophosphate oxidoreductase TERM 1444 1095082 - 1095110 + g 81 -5.4 -5.18297 | gap 1, opp_overlap 1095082, overlap 1095082 ATCGATGCAATTAAA CC-TTTATCATGC ATAC GCTTGATAAAAGG TTTTCTTTCTTCTTC TERM 1445 1095109 - 1095082 - G 74 -7.8 -3.93556 | opp_overlap 1095082 1095082 ATCGATGCAATTAAA CCTTTATCATGC ATAC GCTTGATAAAAG GTTTTCTTTCTTCTT TERM 1446 1095496 - 1095552 + r 100 -23 -3.96867 | opp_overlap 1095501 1095505, overlap 1095505 AATGTTCGTTTTTTT TAAAATAAATGTAAAATCCTATAGAG CAGTA CTCTATAGGATTTTACATTTATTATA TTGCTTTTCTTTTTC TERM 1447 1095547 - 1095501 - R 100 -23.6 -4.07568 | opp_overlap 1095496 1095505, overlap 1095505 TCGTTTTTTTTAAAA TAAATGTAAAATCCTATAGAGC AGT ACTCTATAGGATTTTACATTTA TTATATTGCTTTTCT TERM 1448 1095505 - 1095543 + r 100 -19.3 -4.48583 | opp_overlap 1095501 1095505, overlap 1095496 TTTTTTTAAAATAAA TGTAAAATCCTATAGAG CAGTA CTCTATAGGATTTTACA TTTATTATATTGCTT TERM 1449 1095543 - 1095505 - R 100 -20 -4.64861 | opp_overlap 1095505 1095496, overlap 1095501 TTTTTTTAAAATAAA TGTAAAATCCTATAGAGC AGT ACTCTATAGGATTTTACA TTTATTATATTGCTT SAG1088 1096888 - 1095548 - | EmrB/QacA family drug resistance transporter TERM 1450 1096951 - 1096922 - H 88 -8.6 -4.49311 | opp_overlap 1096922 1096917, overlap 1096924 ATTATTATCATAAAA TAGAGCACCCCG CTAAAT CAAGGTGCTCCA TTTAATTCATTCGAA TERM 1451 1096949 - 1096924 - H 81 -9 -3.85254 | opp_overlap 1096922 1096917, overlap 1096922 TATTATCATAAAATA GAGCACCCCG CTAAAT CAAGGTGCTC CATTTAATTCATTCG SAG1089 1097159 - 1097851 + | hypothetical protein TERM 1452 1097917 - 1097885 - T 72 -8.6 -2.99687 | opp_overlap 1097885 1097890, overlap 1097884 1097881 1097877 1097872 AAGAAAACTAATAAC TAAAAGGCACTG GTTTAATTT CAGCGCCTTTTA TTAATCAATCTCCAG SAG1090 1099922 - 1097922 - | potassium uptake protein, putative TERM 1453 1099676 - 1099661 - G 84 -3.2 -5.76237 | opp_overlap 1099663, overlap 1099663 1099664 TATATAAAGAAAAAA TACCAC CTTC GTGGTG ATTATCCGCCTTTAA TERM 1454 1099674 - 1099663 - G 73 -5.8 -4.49311 | opp_overlap 1099663, overlap 1099661 1099664 TATAAAGAAAAAATA CCAC CTTC GTGG TGATTATCCGCCTTT TERM 1455 1099905 - 1099875 - G 76 -6.3 -4.54404 | opp_overlap 1099875, overlap 1099877 TAAAGCAATAATAAA TCCTGCTTTTGAT GCTTT ATCAAAAGAAGAA TGATTGACATGTTGC SAG1091 1100707 - 1100057 - | short chain dehydrogenase/reductase family oxidoreductase eutD 1101873 - 1100881 - | phosphotransacetylase SAG1093 1102783 - 1101899 - | ribosomal large subunit pseudouridine synthase D ppnK 1103616 - 1102780 - | inorganic polyphosphate/ATP-NAD kinase SAG1095 1104262 - 1103591 - | GTP pyrophosphokinase family protein SAG1096 1104372 - 1104944 + | hypothetical protein TERM 1456 1104951 - 1104971 + F 100 -12.7 -4.59069 | opp_overlap 1104955 AATAACTAACGTTGA GAGATTGGA TTT TCCAATCTC TTTTATAATTCTCAT prsA-2 1105121 - 1106095 + | ribose-phosphate pyrophosphokinase iscS-1 1106099 - 1107214 + | cysteine desulphurase SAG1099 1107216 - 1107563 + | hypothetical protein SAG1100 1107724 - 1108356 + | redox-sensing transcriptional repressor Rex radC 1109049 - 1108369 - | DNA repair protein RadC TERM 1457 1108451 - 1108464 + g 79 -3.1 -5.57888 | overlap 1108452 CAGACAATTCCCAGA TGATC ACAT GATCG TTTTATTTTTTTAGT TERM 1458 1109147 - 1109103 - R 100 -13.4 -3.5594 | opp_overlap 1109114, overlap 1109114 AACTCATGTTTTAAA TCAATAAAAAATACTTAGAT GAAAA ATCTAAGTATTTTTTATTTA ACGATAGGTTCGTGC TERM 1459 1109136 - 1109114 - R 100 -7.9 -5.59655 | opp_overlap 1109114, overlap 1109103 TAAATCAATAAAAAA TACTTAGAT GAAAA ATCTAAGTA TTTTTTATTTAACGA TERM 1460 1109114 - 1109136 + r 100 -7.9 -5.63517 | opp_overlap 1109103 1109114 TAAATCAATAAAAAA TACTTAGAT GAAAA ATCTAAGTA TTTTTTATTTAACGA SAG1102 1110278 - 1109145 - | hypothetical protein arb 1111805 - 1110369 - | 6-phospho-beta-glucosidase SAG1104 1112582 - 1111968 - | platelet activating factor, putative SAG1105 1113504 - 1112683 - | HAD superfamily hydrolase TERM 1461 1113920 - 1113902 - H 81 -3.9 -5.64304 | TAATACAACAAAAAA TCCTTAC ATGAG ATAAGGA GATTAAACGACCCTG TERM 1462 1114910 - 1114922 + G 78 -7.7 -4.34345 | CCATTATTGATATTG CCAAC AGC GTTGG TTTTAATAATCTATC SAG1106 1114129 - 1115058 + | AraC family transcriptional regulator TERM 1463 1115087 - 1115056 - T 100 -7.5 -5.90231 | opp_overlap 1115056 ATAAATACAAAAAAA TAGAAACTAGTTA AATCCA TGACTAGTTTCTA TTTTTTATTATTTAA TERM 1464 1115056 - 1115087 + T 100 -9.7 -5.72254 | opp_overlap 1115056 ATAAATACAAAAAAA TAGAAACTAGTTA AATCCA TGACTAGTTTCTA TTTTTTATTATTTAA SAG1107 1116647 - 1115115 - | voltage-gated chloride channel family protein TERM 1465 1116714 - 1116747 + r 71 -8.3 -3.23598 | opp_overlap 1116721, overlap 1116705 1116721 AGGAACTCTTGGTAA CTAAAAATACCTCTC ATCA GAGAAGTACTTTTAG TTAATAGATTACTTA TERM 1466 1116740 - 1116721 - R 86 -7.2 -4.8622 | opp_overlap 1116714 1116705 1116721 CTTGGTAACTAAAAA TACCTCTC ATCA GAGAAGTA CTTTTAGTTAATAGA potD 1117829 - 1116756 - | spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein TERM 1467 1117201 - 1117215 + g 81 -7.2 -4.56775 | opp_overlap 1117210 GCCTTAACGTTTGGT GTTAGA GCA TCTAAC TTTTTAGAAGCGGCT potC 1118598 - 1117822 - | spermidine/putrescine ABC transporter, permease protein potB 1119389 - 1118595 - | spermidine/putrescine ABC transporter, permease protein potA 1120527 - 1119373 - | spermidine/putrescine ABC transporter, ATP-binding protein murB 1121478 - 1120576 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1468 1121214 - 1121229 + g 74 -7.6 -3.87075 | opp_overlap 1121207 TAACATAACCGTTGA CTGTCA CAGT TGACAG TTTATCAAACATGAT TERM 1469 1121540 - 1121526 - R 76 -3.5 -5.4492 | opp_overlap 1121526 TATAGACACAAAAAA TCGGC ATAAA ACCGA TTTCTATTATACCAA folK 1122110 - 1121622 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folB 1122469 - 1122107 - | dihydroneopterin aldolase folP 1123274 - 1122471 - | dihydropteroate synthase folE 1123841 - 1123278 - | GTP cyclohydrolase I folC 1125122 - 1123860 - | folylpolyglutamate synthase rarD 1126011 - 1125124 - | rarD protein TERM 1470 1125985 - 1126002 + g 70 -5.7 -4.41548 | opp_overlap 1125984 1125987 GGCTGACAAGCCAAG GATAATT CCTA AATTATC TTTTCTCAACTCTCA thrB 1126864 - 1125998 - | homoserine kinase hom 1128149 - 1126866 - | homoserine dehydrogenase TERM 1471 1126926 - 1126939 + g 70 -5.3 -4.44211 | ACTCTCAGGAAACTC CTCAA TAAA TTGAG TTATTTTCTCTTGGC TERM 1472 1127786 - 1127773 - G 76 -6.7 -4.38927 | opp_overlap 1127772 CCCTCATAGAATAAA GCTAG ACCT CTAGC GTCTGCTAAATCCAT SAG1121 1128326 - 1129213 + | polysaccharide deacetylase family protein TERM 1473 1129211 - 1129238 + T 100 -14.4 -3.73936 | opp_overlap 1129211 1129217, overlap 1129217 AAGACGATTAACCAA TAAAAAGAAGCC TTCT GGCTTCTTTTTA TTCTTCATAAGATTT TERM 1474 1129238 - 1129211 - T 100 -14.4 -3.42809 | opp_overlap 1129211 1129217, overlap 1129217 AAGACGATTAACCAA TAAAAAGAAGCC TTCT GGCTTCTTTTTA TTCTTCATAAGATTT TERM 1475 1129217 - 1129232 + T 95 -9 -5.31855 | opp_overlap 1129217 1129211, overlap 1129211 ATTAACCAATAAAAA GAAGCC TTCT GGCTTC TTTTTATTCTTCATA TERM 1476 1129232 - 1129217 - T 95 -9 -5.20534 | opp_overlap 1129211 1129217, overlap 1129211 ATTAACCAATAAAAA GAAGCC TTCT GGCTTC TTTTTATTCTTCATA SAG1122 1130783 - 1129236 - | transporter, BCCT family protein TERM 1477 1130135 - 1130116 - G 73 -9.4 -2.76093 | ATTTGAACAAATGCA TTATTGGG AACA CCCAATAA AAAACTTAACCCTCC SAG1123 1130897 - 1130793 - | hypothetical protein TERM 1478 1130907 - 1130884 - G 100 -9 -5.4505 | opp_overlap 1130884 1130887 CTCCTCAACAAAAAA GAACCAAATA ACAT TATCTGGTTC TTGTGTTTGACTTAG SAG1124 1132302 - 1130926 - | aldehyde dehydrogenase family protein SAG1125 1133383 - 1132376 - | hypothetical protein TERM 1479 1133477 - 1133440 - R 95 -10.7 -4.35518 | opp_overlap 1133441 1133442 1133446, overlap 1133441 1133442 AACGTGACAGGAAAA CCGAAAGAGGACCAGAA TATG CTCTGATCCTCTTTCAT TACTAATTCACAATT TERM 1480 1133476 - 1133441 - R 100 -14.2 -3.20588 | opp_overlap 1133441 1133442 1133446, overlap 1133440 1133442 ACGTGACAGGAAAAC CGAAAGAGGACCAGAA TATG CTCTGATCCTCTTTCA TTACTAATTCACAAT TERM 1481 1133441 - 1133476 + r 77 -9.1 -3.27476 | opp_overlap 1133440 1133441 1133442, overlap 1133442 1133446 ACGTGACAGGAAAAC CGAAAGAGGACCAGA ATATGC TCTGATCCTCTTTCA TTACTAATTCACAAT TERM 1482 1133442 - 1133475 + r 89 -12.6 -2.56164 | opp_overlap 1133441 1133440 1133442, overlap 1133441 1133446 CGTGACAGGAAAACC GAAAGAGGACCAGA ATATGC TCTGATCCTCTTTC ATTACTAATTCACAA TERM 1483 1133475 - 1133442 - R 100 -15.5 -2.51871 | opp_overlap 1133442 1133441 1133446, overlap 1133441 1133440 CGTGACAGGAAAACC GAAAGAGGACCAGAA TATG CTCTGATCCTCTTTC ATTACTAATTCACAA TERM 1484 1133446 - 1133471 + r 77 -7.6 -3.98113 | opp_overlap 1133442 1133441 1133440, overlap 1133442 1133441 ACAGGAAAACCGAAA GAGGACCAGA ATATGC TCTGATCCTC TTTCATTACTAATTC SAG1126 1134177 - 1133491 - | hypothetical protein TERM 1485 1133776 - 1133797 + g 76 -6 -4.7078 | AATTTGTTGGTCAGT GATTTTTG TTTCAT CAAAAATC TTTTTACCTGCTTCA TERM 1486 1135661 - 1135646 - g 70 -3.4 -4.95806 | overlap 1135648 AAATCAGGAGAAAAA TATTTT ATTC AAAATA TGAAAAAAACAGCTG SAG1127 1134596 - 1135936 + | hypothetical protein TERM 1487 1135991 - 1136017 + F 100 -11 -5.61913 | opp_overlap 1135983 1135991 ATTAAAATCATTAAA CTTGTTTCCATT TTG ACTGGAAACAAG TTTTTTATATTTATT TERM 1488 1136017 - 1135991 - f 90 -11 -3.93659 | opp_overlap 1135991, overlap 1135983 ATTAAAATCATTAAA CTTGTTTCCATT TTG ACTGGAAACAAG TTTTTTATATTTATT SAG1128 1136133 - 1136330 + | Cro/CI family transcriptional regulator SAG1129 1136375 - 1136485 + | hypothetical protein SAG1130 1136814 - 1136963 + | hypothetical protein TERM 1489 1137006 - 1137037 + T 100 -17.6 -4.01184 | opp_overlap 1137006 1137009 1137012, overlap 1137009 1137012 CACTGTCTATATAAA TAATAAGGCTGGAA AATT TTCCAGCCTTATTA TTTATGGTAATATCT TERM 1490 1137037 - 1137006 - T 100 -17.6 -4.0371 | opp_overlap 1137006 1137009 1137012, overlap 1137009 1137012 CACTGTCTATATAAA TAATAAGGCTGGAA AATT TTCCAGCCTTATTA TTTATGGTAATATCT TERM 1491 1137009 - 1137034 + T 100 -14.9 -4.12254 | opp_overlap 1137006 1137009 1137012, overlap 1137006 1137012 TGTCTATATAAATAA TAAGGCTGGAA AATT TTCCAGCCTTA TTATTTATGGTAATA TERM 1492 1137034 - 1137009 - T 100 -14.9 -4.14627 | opp_overlap 1137009 1137006 1137012, overlap 1137006 1137012 TGTCTATATAAATAA TAAGGCTGGAA AATT TTCCAGCCTTA TTATTTATGGTAATA TERM 1493 1137031 - 1137012 - T 100 -12.2 -4.18983 | opp_overlap 1137012 1137009 1137006, overlap 1137009 1137006 CTATATAAATAATAA GGCTGGAA AATT TTCCAGCC TTATTATTTATGGTA TERM 1494 1137012 - 1137031 + T 100 -12.2 -4.17309 | opp_overlap 1137009 1137006 1137012, overlap 1137009 1137006 CTATATAAATAATAA GGCTGGAA AATT TTCCAGCC TTATTATTTATGGTA tpx 1137533 - 1137039 - | thiol peroxidase TERM 1495 1137571 - 1137581 + r 71 -5.4 -4.64598 | CCTTTATTTTACTAT GAAG CTT CTTC TTTTTCGAATAATTG SAG1132 1138265 - 1137606 - | hypothetical protein SAG1133 1139029 - 1138265 - | hypothetical protein TERM 1496 1138812 - 1138778 - G 100 -11.6 -5.2112 | opp_overlap 1138778 1138777 AATAGTACTAAAAAA GTCACTTTGTAAATAG TAA CTATCCACTAAGTGAC CATTTTCATGTAAAG SAG1134 1139675 - 1139034 - | GntR family transcriptional regulator TERM 1497 1139806 - 1139787 - R 100 -13.6 -4.62051 | opp_overlap 1139785 1139784 1139782 AAATATCATATAAAA GGAGCTGG TCTC CCAGCTCC GAGTGTCTTATCATA SAG1135 1140390 - 1139839 - | gls24 protein, putative TERM 1498 1139913 - 1139933 + g 73 -9.1 -3.33885 | ATACTGCTTCTTTTG TTTTCTCTG CTC CAGAGGAAA TTGCTGCTTTAGCTT SAG1136 1140609 - 1140412 - | hypothetical protein TERM 1499 1140584 - 1140594 + g 72 -4 -5.06816 | GAAACCTTATCAACT TTTG CAT CAAA TTTTTCTTCAGACAT SAG1137 1141198 - 1140656 - | gls24 protein, putative SAG1138 1141448 - 1141254 - | hypothetical protein SAG1139 1142039 - 1141458 - | hypothetical protein SAG1140 1142302 - 1142054 - | hypothetical protein SAG1141 1142688 - 1142350 - | hypothetical protein TERM 1500 1142953 - 1142975 + r 90 -12.2 -3.06509 | opp_overlap 1142953, overlap 1142948 1142955 1142959 1142971 CAAATGATGCAAAAA GACTAAGAAT ACA ATTCTTAGTC TCTGATTATTTAAGC TERM 1501 1142975 - 1142953 - R 100 -12.2 -4.72386 | opp_overlap 1142953 1142948 1142955 1142959 1142971 CAAATGATGCAAAAA GACTAAGAAT ACA ATTCTTAGTC TCTGATTATTTAAGC TERM 1502 1142955 - 1142973 + r 74 -9 -3.08358 | opp_overlap 1142953, overlap 1142953 1142948 1142959 1142971 AATGATGCAAAAAGA CTAAGAAT ACA ATTCTTAG TCTCTGATTATTTAA pcrA 1145286 - 1143007 - | ATP-dependent DNA helicase PcrA TERM 1503 1145353 - 1145387 + r 72 -2.8 -5.3671 | opp_overlap 1145357, overlap 1145354 1145357 CTTTTTCCCAATAGA AAAAGGAGTTAAACAG ACG CTGTCTAACTCCTACC TTTTTTACTTCTCTT TERM 1504 1145383 - 1145357 - R 100 -14.6 -5.0916 | opp_overlap 1145357 1145354 1145353 TTCCCAATAGAAAAA GGAGTTAAACAG ACG CTGTCTAACTCC TACCTTTTTTACTTC TERM 1505 1145357 - 1145383 + r 90 -12.4 -2.95904 | opp_overlap 1145357, overlap 1145354 1145353 TTCCCAATAGAAAAA GGAGTTAAACAG ACG CTGTCTAACTCC TACCTTTTTTACTTC SAG1143 1145778 - 1145392 - | hypothetical protein TERM 1506 1145874 - 1145916 + r 100 -18.8 -3.93708 | opp_overlap 1145880 1145885, overlap 1145885 TTTTTAACTGACCTA TTATAACAAAAGAGCTCAGA TAC TCTGAGCTCTTTTGTCATGA TTTCATGCTTTCTTT TERM 1507 1145910 - 1145880 - R 100 -20 -3.42699 | opp_overlap 1145874 1145885, overlap 1145885 ACTGACCTATTATAA CAAAAGAGCTCAGA TAC TCTGAGCTCTTTTG TCATGATTTCATGCT TERM 1508 1145885 - 1145905 + r 100 -14.1 -4.52703 | opp_overlap 1145885 1145880, overlap 1145874 CCTATTATAACAAAA GAGCTCAGA TAC TCTGAGCTC TTTTGTCATGATTTC TERM 1509 1145905 - 1145885 - R 100 -14.1 -4.81212 | opp_overlap 1145874 1145885, overlap 1145880 CCTATTATAACAAAA GAGCTCAGA TAC TCTGAGCTC TTTTGTCATGATTTC uraA 1147236 - 1145911 - | uracil permease TERM 1510 1146806 - 1146780 - G 83 -9.6 -3.91028 | opp_overlap 1146783 1146786, overlap 1146783 1146786 AACCTAAACCAATAA CAATAATCATAG GTC CAATGATTATTG GTGGCAAAATCTTAT TERM 1511 1147691 - 1147720 + H 71 -8.1 -3.33097 | gap 1, opp_overlap 1147690 1147693, overlap 1147690 1147693 GCCAATATTAATAAT G-AGTAGTAAGCTT AAT AAGTTTACTACTAC CTTTATTTGTGCGCT TERM 1512 1147693 - 1147717 + H 83 -10.9 -2.82776 | opp_overlap 1147693 1147690, overlap 1147691 1147690 CAATATTAATAATGA GTAGTAAGCTT AAT AAGTTTACTAC TACCTTTATTTGTGC TERM 1513 1147717 - 1147693 - H 72 -8.7 -2.98778 | opp_overlap 1147691 1147690 1147693, overlap 1147690 CAATATTAATAATGA GTAGTAAGCTT AAT AAGTTTACTAC TACCTTTATTTGTGC TERM 1514 1147755 - 1147781 + H 100 -15.4 -4.14598 | opp_overlap 1147758, overlap 1147743 1147758 AGCTAGCATCTTTCA GAAGTTATCTCT TTT AGAGATAACTTC TTTCGTTTCATTACA TERM 1515 1147758 - 1147778 + H 100 -11.3 -4.17906 | opp_overlap 1147758, overlap 1147743 1147755 TAGCATCTTTCAGAA GTTATCTCT TTT AGAGATAAC TTCTTTCGTTTCATT TERM 1516 1147778 - 1147758 - H 88 -11.3 -3.30441 | opp_overlap 1147743 1147758 1147755 TAGCATCTTTCAGAA GTTATCTCT TTT AGAGATAAC TTCTTTCGTTTCATT SAG1145 1147833 - 1149179 + | sodium:alanine symporter family protein TERM 1517 1150148 - 1150126 - g 71 -7.2 -3.97088 | opp_overlap 1150126, overlap 1150121 TCCCAGAAGACGAAA TTTTCGATAA TGT TTATCAAAAA TTATACAAAAACGAA SAG1146 1149243 - 1150478 + | cation efflux family protein TERM 1518 1150524 - 1150565 + F 100 -12.7 -4.9725 | opp_overlap 1150524, overlap 1150535 AATAGCTTACAAAAA TAAATTAAAAAGATTGAGA AGAA TCTCGGTCTTTTTAATTTG TTTTTATGTAAACGT TERM 1519 1150565 - 1150524 - f 80 -6.1 -4.87273 | opp_overlap 1150524 1150535 AATAGCTTACAAAAA TAAATTAAAAAGATTGAGA AGAA TCTCGGTCTTTTTAATTTG TTTTTATGTAAACGT TERM 1520 1150535 - 1150554 + F 79 -5 -5.1517 | opp_overlap 1150524, overlap 1150524 AAAATAAATTAAAAA GATTGAGA AGAA TCTCGGTC TTTTTAATTTGTTTT TERM 1521 1150660 - 1150672 + G 73 -6.3 -4.43879 | opp_overlap 1150659 1150660 ATACGTTCAATTAAT GGTTA TTT TAACC TTTTCATTCGCTGGT SAG1147 1150637 - 1151029 + | hypothetical protein SAG1148 1151010 - 1151705 + | hypothetical protein SAG1149 1151774 - 1152397 + | hypothetical protein TERM 1522 1152395 - 1152418 + T 71 -8.3 -3.23598 | opp_overlap 1152395 1152401, overlap 1152386 CAGCATGGTTTAAAA TAAAAAGGC ATTAAC GCCTTTTTA TTAATACCTTAATTA TERM 1523 1152418 - 1152395 - T 85 -9 -4.10161 | opp_overlap 1152395 1152386, overlap 1152401 CAGCATGGTTTAAAA TAAAAAGGCA TTAA CGCCTTTTTA TTAATACCTTAATTA TERM 1524 1152412 - 1152401 - T 76 -3.6 -5.45802 | opp_overlap 1152395 1152386, overlap 1152395 GGTTTAAAATAAAAA GGCA TTAA CGCC TTTTTATTAATACCT TERM 1525 1152778 - 1152805 + T 79 -10 -2.9302 | opp_overlap 1152783, overlap 1152783 TTTATCAACAAAAAC AAAAAGACTTGC TAAA GCAAGTCTTTTA ATTATTATAATTCAA TERM 1526 1152800 - 1152783 - T 100 -9.9 -5.74684 | opp_overlap 1152783 1152778 CAACAAAAACAAAAA GACTTGC TAAA GCAAGTC TTTTAATTATTATAA TERM 1527 1152783 - 1152800 + T 93 -9.9 -4.59414 | opp_overlap 1152783, overlap 1152778 CAACAAAAACAAAAA GACTTGC TAAA GCAAGTC TTTTAATTATTATAA rpsA 1154012 - 1152810 - | 30S ribosomal protein S1 TERM 1528 1152956 - 1152968 + g 74 -7.7 -3.91084 | opp_overlap 1152967 CTGCTTGCGCTGGAC GCTCT TCA AGAGC TTTCATTGAAAGTGA TERM 1529 1154049 - 1154035 - R 93 -10 -4.64334 | opp_overlap 1154035, overlap 1154022 AATCCTCCAACAAAA GCTAGC CGA GCTAGC TTTTGATAACAATAT TERM 1530 1154035 - 1154049 + r 93 -10 -4.26344 | opp_overlap 1154035 1154022 AATCCTCCAACAAAA GCTAGC CGA GCTAGC TTTTGATAACAATAT TERM 1531 1154109 - 1154132 + r 87 -10.4 -3.65902 | opp_overlap 1154099 1154118 AAATATCTCTTTGAC GGTGTCAAAC AAAA GTTTGATACC TTTGACTGGGGTAGC SAG1151 1154586 - 1154356 - | hypothetical protein TERM 1532 1154554 - 1154564 + g 72 -4 -5.0095 | opp_overlap 1154554, overlap 1154548 1154549 TTGAGCGTCTGAAAT TTGA ATT TCAA TTTTCTTATCTTTTT TERM 1533 1154664 - 1154633 - R 100 -17.6 -4.54047 | opp_overlap 1154641, overlap 1154641 TTATTGTACACAAAA TACTAAAAGCTTGC AAGA GCAAGCTTTTAGTA TAGACTTAATCTACT TERM 1534 1154641 - 1154656 + r 89 -9 -4.35518 | opp_overlap 1154641 1154633 CACAAAATACTAAAA GCTTGC AAGA GCAAGC TTTTAGTATAGACTT TERM 1535 1154656 - 1154641 - R 90 -9 -4.58236 | opp_overlap 1154641, overlap 1154633 CACAAAATACTAAAA GCTTGC AAGA GCAAGC TTTTAGTATAGACTT ilvE 1155692 - 1154670 - | branched-chain amino acid aminotransferase TERM 1536 1155812 - 1155783 - R 72 -7.3 -3.918 | opp_overlap 1155783 1155786, overlap 1155775 1155786 AGATAAATTACCAAA CTAGTAAAAACAC AAAT GTGTTTTTACTTA ATTTTAACTGAGAAT TERM 1537 1155809 - 1155786 - R 84 -11.2 -3.01022 | opp_overlap 1155786 1155783, overlap 1155775 1155783 TAAATTACCAAACTA GTAAAAACAC AAAT GTGTTTTTAC TTAATTTTAACTGAG TERM 1538 1155786 - 1155809 + r 89 -11.2 -3.69605 | opp_overlap 1155775 1155783 1155786, overlap 1155783 TAAATTACCAAACTA GTAAAAACAC AAAT GTGTTTTTAC TTAATTTTAACTGAG parC 1158265 - 1155806 - | DNA topoisomerase IV subunit A TERM 1539 1157557 - 1157538 - G 76 -10 -3.04322 | opp_overlap 1157538 TTTAAGGTTTCAATA GCAGTTCG CGAG CGAACCGC TACTCTCCCCTTACC TERM 1540 1158003 - 1157975 - G 73 -9 -3.35813 | GTGCATTTCAATCAA TGTCTCACGATT TTTCC AATCTTGAGACA TACGAACCATCGCGT TERM 1541 1158056 - 1158027 - G 76 -10.1 -2.98942 | overlap 1158029 1158033 ATCGCGTCATAGATA GAGGAATCCCCAT GAGG ATGGAAATTCCCC ATAACATTACCGACT TERM 1542 1158054 - 1158029 - G 70 -9.1 -3.05022 | overlap 1158027 1158033 CGCGTCATAGATAGA GGAATCCCCAT GAGG ATGGAAATTCC CCATAACATTACCGA parE 1160360 - 1158399 - | DNA topoisomerase IV subunit B TERM 1543 1159850 - 1159864 + g 77 -2.8 -5.43866 | TTCCAGATTTTGATT TTGGTG CCG TGCCAA TTTTTTTCAGAGTTG TERM 1544 1160260 - 1160221 - G 83 -9.4 -3.83205 | overlap 1160222 1160224 1160256 ATTTCCCACACTAAA TGATGTAAACCAGTTCCA TCTG TGGAACCGATATACATCC CTGGACGCTTACGAA TERM 1545 1160259 - 1160222 - G 86 -12.9 -2.89602 | overlap 1160221 1160224 1160256 TTTCCCACACTAAAT GATGTAAACCAGTTCCA TCTG TGGAACCGATATACATC CCTGGACGCTTACGA TERM 1546 1160257 - 1160224 - G 76 -9.7 -2.99871 | overlap 1160222 1160221 1160256 TCCCACACTAAATGA TGTAAACCAGTTCCA TCTG TGGAACCGATATACA TCCCTGGACGCTTAC TERM 1547 1160387 - 1160435 + H 80 -7.2 -4.60977 | gap 1, opp_overlap 1160387 1160410 1160426, overlap 1160382 1160388 1160390 1160426 TTTTTTATATTACAA GT-TTTTTGCTGTTTTTGCAAAA TTAT TTTTTTAAAAATAGCAAAAAGAC TTTTATGCTTATGTT SAG1155 1160462 - 1161100 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 1548 1161134 - 1161094 - T 100 -12.9 -6.01187 | opp_overlap 1161101 1161108, overlap 1161098 AAGTAAACAAAAAAA TAAATAATAAAAAACCGCT AGT AGCGGTTTTTTATTATAAA ACTAACAATGTTTCG TERM 1549 1161130 - 1161098 - T 100 -18.1 -5.36181 | opp_overlap 1161101 1161108, overlap 1161094 AAACAAAAAAATAAA TAATAAAAAACCGCT AGT AGCGGTTTTTTATTA TAAAACTAACAATGT TERM 1550 1161101 - 1161127 + T 100 -15.4 -3.31144 | opp_overlap 1161098 1161094, overlap 1161108 CAAAAAAATAAATAA TAAAAAACCGCT AGT AGCGGTTTTTTA TTATAAAACTAACAA TERM 1551 1161108 - 1161120 + T 100 -9.1 -5.55769 | opp_overlap 1161098 1161094, overlap 1161101 ATAAATAATAAAAAA CCGCT AGT AGCGG TTTTTTATTATAAAA ung 1161819 - 1161166 - | uracil-DNA glycosylase TERM 1552 1161909 - 1161878 - R 100 -12.5 -5.26918 | opp_overlap 1161878 ATATTTTATAAAAAA CGTTACTGCTTTA TTCATT CAAAGCAGTAACG TTTTTTTATTAATCT TERM 1553 1161878 - 1161909 + r 100 -11.8 -5.85737 | opp_overlap 1161878 ATATTTTATAAAAAA CGTTACTGCTTT ATTCATTC AAAGCAGTAACG TTTTTTTATTAATCT SAG1157 1162403 - 1161918 - | hypothetical protein TERM 1554 1162281 - 1162297 + g 84 -5.1 -5.32882 | AATAGAAAAATGTTT CCCCA GTAAAGA TGGGG TTTTTTCTACTAATA neuA 1163758 - 1162517 - | CMP-N-acetylneuraminic acid synthetase NeuA TERM 1555 1163722 - 1163671 - G 73 -6.8 -4.22652 | gap 1, opp_overlap 1163676, overlap 1163664 1163674 CTATAGTATGGAAAA TCA-TGGGTTTACCAGATAGGAATA ACA TATTCTTATCTGGTAATCCTTTTGA CCCTGATCGCGCAGG TERM 1556 1163718 - 1163674 - G 71 -8.7 -3.11922 | opp_overlap 1163676, overlap 1163664 1163671 TAGTATGGAAAATCA TGGGTTTACCAGATAGGAATA ACA TATTCTTATCTGGTAATCCTT TTGACCCTGATCGCG TERM 1557 1163676 - 1163716 + g 100 -17.9 -4.12188 | opp_overlap 1163664 1163674 1163671 GTATGGAAAATCATG GGTTTACCAGATAGGAATA ACA TATTCTTATCTGGTAATCC TTTTGACCCTGATCG neuD 1164398 - 1163769 - | neuD protein neuC 1165549 - 1164395 - | UDP-N-acetylglucosamine-2-epimerase NeuC TERM 1558 1164954 - 1164968 + g 71 -4.3 -4.74767 | TAGGATTCCTCTAGT GCAAT ACCTA ATTGC TTTTCTATTGCTTCT neuB 1166651 - 1165626 - | N-acetyl neuramic acid synthetase NeuB TERM 1559 1166233 - 1166247 + g 71 -4.3 -4.78572 | overlap 1166232 ACCGCCATACCCGTC GAAAG AATAA CTTTC TTTTGTTGCTTGCCA TERM 1560 1166384 - 1166362 - G 75 -7 -4.2558 | opp_overlap 1166362, overlap 1166349 GACTCTTCATCAAAA GGTGTTGAAA AGG TCTCCACACC TTTTGAAATTGCATA cpsL 1168051 - 1166651 - | polysaccharide biosynthesis protein CpsL cpsK 1169004 - 1168048 - | polysaccharide biosynthesis protein CpsK(V) cpsJ 1169966 - 1169001 - | glycosyl transferase CpsJ(V) cpsO 1170942 - 1169959 - | glycosyl transferase CpsO(V) cpsN 1171833 - 1170946 - | glycosyl transferase CpsN(V) TERM 1561 1171252 - 1171267 + g 73 -3.2 -5.17353 | GATTTTCCTATTTTG GGGACA AAAG TATCCC TTTTTTGATAAATAT cpsM 1172584 - 1171859 - | polysaccharide biosynthesis protein CpsM(V) cpsH 1173717 - 1172623 - | polysaccharide biosynthesis protein cpsH(V) TERM 1562 1173390 - 1173348 - G 71 -8.8 -3.16743 | AATTGACATACTTAA TTTCTATTAAATCTAATTTC ACA AAAATTTGATTTAATAGAAC TCCCAAAATACGCGA cpsG 1174195 - 1173704 - | glycosyl transferase CpsG(V) cpsF 1174644 - 1174195 - | polysaccharide biosynthesis protein CpsF TERM 1563 1174396 - 1174375 - G 76 -6.5 -4.45115 | opp_overlap 1174392 1174394 ACCAATATAAAAGAA TGGTACTGC TACA GCGGCACCA GATGATATGATAACA TERM 1564 1174392 - 1174418 + g 80 -6.6 -4.77173 | opp_overlap 1174375, overlap 1174394 GTACTGCTACAGCGG CACCAGATGATA TGA TAACATCTGGTC TTTCTTTTCTAAGGA TERM 1565 1174394 - 1174416 + g 83 -9.2 -3.99938 | opp_overlap 1174375, overlap 1174392 ACTGCTACAGCGGCA CCAGATGATA TGA TAACATCTGG TCTTTCTTTTCTAAG TERM 1566 1174626 - 1174593 - G 76 -7.6 -4.0896 | gap 1 AAATGGGTTTCAAAA GGTTCAAGTG-TGCT AGATG ACCACCACTTGAACC AACCAGACAAATTTT cpsE 1176056 - 1174668 - | glycosyl transferase CpsE cpsD 1176758 - 1176069 - | cpsD protein cpsC 1177461 - 1176769 - | cpsC protein TERM 1567 1177349 - 1177335 - G 74 -2.8 -5.29445 | GCGTAACAATAAAAA GACTAT AGA AAAGTC CAGCTGTTGCAAATG cpsB 1178201 - 1177470 - | capsular polysaccharide biosynthesis protein CpsB TERM 1568 1177977 - 1177996 + g 93 -8 -5.10029 | opp_overlap 1177977 TTCTCCACCATATAA GATTTGAA GATG TTCAAATC TTTTTTCCGCTTCGT cpsA 1179664 - 1178207 - | capsular polysaccharide biosynthesis protein CpsA SAG1176 1179904 - 1180776 + | LysR family transcriptional regulator TERM 1569 1180768 - 1180792 + T 100 -11.5 -4.7629 | opp_overlap 1180768 AATCATAAAAATAAA CAGTCCTGAGA TTG TCTCAGAACTG TTTTTAAATTACTCA TERM 1570 1180792 - 1180768 - T 100 -13.7 -5.00267 | opp_overlap 1180768 AATCATAAAAATAAA CAGTCCTGAGA TTG TCTCAGAACTG TTTTTAAATTACTCA SAG1177 1181568 - 1180801 - | hypothetical protein deoD-1 1182287 - 1181577 - | purine nucleoside phosphorylase SAG1179 1183527 - 1182271 - | voltage-gated chloride channel family protein TERM 1571 1182455 - 1182441 - G 77 -2.8 -5.52909 | overlap 1182431 1182443 1182453 TAATAGCTAAAAAAA TAGCTG CAC CAACCA ACATACTGGTTACTA deoD-2 1184338 - 1183529 - | purine nucleoside phosphorylase arsC 1184784 - 1184377 - | arsenate reductase deoB-1 1186046 - 1184835 - | phosphopentomutase rpiA 1186774 - 1186103 - | ribose-5-phosphate isomerase A TERM 1572 1187008 - 1186989 - R 85 -5 -5.65927 | opp_overlap 1186989, overlap 1186982 TATTCAAACAAAAAA GATGAGTT TCTT AGCTCATC TTTTTATGCATATAA TERM 1573 1186989 - 1187008 + r 86 -7.2 -4.89852 | opp_overlap 1186989 1186982 TATTCAAACAAAAAA GATGAGTT TCTT AGCTCATC TTTTTATGCATATAA SAG1184 1187722 - 1187012 - | hypothetical protein estA 1188600 - 1187812 - | tributyrin esterase TERM 1574 1188625 - 1188645 + r 70 -8.3 -3.05343 | opp_overlap 1188625 CATTCTAGCAAGAAA GGCTACCAA AAT TTGGTAACC TCTTAACACTATCAA TERM 1575 1188645 - 1188625 - R 95 -10.5 -4.25056 | opp_overlap 1188625 CATTCTAGCAAGAAA GGCTACCAA AAT TTGGTAACC TCTTAACACTATCAA SAG1186 1190318 - 1188657 - | metallo-beta-lactamase superfamily protein TERM 1576 1188883 - 1188894 + g 77 -3 -5.45813 | TTAACACGAGCTTTA GAAA TAAT TTTC TTTTCTTTTTTGCTG TERM 1577 1190314 - 1190324 + g 73 -5.4 -4.56093 | overlap 1190306 1190318 ATGATTTTTATGTCG CTCA TAA TGAG TTTTCTCCTTAAATT TERM 1578 1190585 - 1190610 + r 76 -6.3 -4.7373 | opp_overlap 1190585 1190588, overlap 1190584 1190579 1190578 AAGTGTATAGAAAAA GAAGTGAAA CACTTCCA TTTCACTTC TTTTTAATCAAATAA TERM 1579 1190599 - 1190585 - R 95 -8.6 -4.98522 | opp_overlap 1190584 1190579 1190578 1190585, overlap 1190588 AAGTGTATAGAAAAA GAAGTG AAA CACTTC CATTTCACTTCTTTT SAG1187 1191375 - 1190614 - | ABC transporter, ATP-binding protein SAG1188 1192238 - 1191375 - | ABC transporter, permease protein TERM 1580 1191793 - 1191781 - G 72 -7.7 -3.65812 | opp_overlap 1191780 CCTGTTGCAATATAA GCTTG CCC CAAGC GTGTATAGAGAAAAT SAG1189 1193255 - 1192251 - | hypothetical protein TERM 1581 1192296 - 1192317 + g 80 -10.3 -3.44924 | opp_overlap 1192293, overlap 1192294 CTGTTTCATAATCTT CTTAGGAAT TTTA ATTCCTAAG TGTTTGGCTGCTTTC TERM 1582 1193032 - 1193042 + g 74 -4 -5.24449 | TCGGCGTTTAAAACG GTTA ATT TAAC TTTTTTCCCTTTATA TERM 1583 1193339 - 1193313 - H 76 -3.6 -5.46706 | AGCGCAAAAGAAAAA GCGCCTGATAAA TAA CTTACCTTGCGC TCTCTATTGTTAGAC TERM 1584 1193422 - 1193395 - H 76 -6.4 -4.64598 | overlap 1193362 GAAGTACTCCAAAAA GTCGTATCTATG CACC CATAAACACAAC TTTATCTACGCCAGT pavA 1193614 - 1195269 + | adherence and virulence protein A TERM 1585 1195290 - 1195267 - T 100 -9.6 -5.72207 | opp_overlap 1195267 CTTAAACTAAAAAAA TAGACTGGGA CATA TCCCTGTCTA TTTTTAGTGTTATTA TERM 1586 1195267 - 1195290 + T 100 -9.6 -4.93316 | opp_overlap 1195267 CTTAAACTAAAAAAA TAGACTGGGA CATA TCCCTGTCTA TTTTTAGTGTTATTA budA 1196042 - 1195323 - | alpha-acetolactate decarboxylase TERM 1587 1195705 - 1195719 + g 72 -3.6 -5.06451 | opp_overlap 1195706, overlap 1195706 AAAGACTTAAAGAGA TTTTGA CCT TCAAAG TTTTTTAGAATCATC ilvK 1197738 - 1196056 - | acetolactate synthase SAG1193 1199074 - 1197848 - | TPR domain-containing protein SAG1194 1200254 - 1199064 - | hypothetical protein SAG1195 1200807 - 1200346 - | MutT/nudix family protein mutX 1201279 - 1200797 - | mutator MutT protein TERM 1588 1202230 - 1202214 - g 74 -5.1 -4.77036 | opp_overlap 1202214 CTTTATTATGAAAAA GGAACAG GTT CTGTTAC TTTTGATAATATATC TERM 1589 1202987 - 1202999 + G 84 -7.7 -4.65895 | AATTGAACATTTTGT TCCTG ATG CAGGA TTTTTCCGTAAAACG TERM 1590 1204677 - 1204644 - g 78 -5.6 -4.9218 | TACCTAGTACAAAAA GTTGGTAAT-GACTAT CAAA AT-GTCTATTACCAAC CTCAAAGCATGACAA SAG1197 1201497 - 1204715 + | hyaluronate lyase TERM 1591 1204753 - 1204734 - T 100 -9.4 -5.36441 | opp_overlap 1204734 GCCGTACATAAAAAA CCTATCAT CAAA ATGATAGG TTTTTTGGTTCAATT TERM 1592 1204734 - 1204753 + T 100 -9.4 -5.29385 | opp_overlap 1204734 GCCGTACATAAAAAA CCTATCAT CAAA ATGATAGG TTTTTTGGTTCAATT rfbB 1205813 - 1204767 - | dTDP-glucose 4,6-dehydratase TERM 1593 1205814 - 1205828 + r 100 -5.8 -5.95286 | overlap 1205823 TTTAAATTCAGTCAT TTTTTC TCC GAAAAA TTTTTTCTTTTTGCT TERM 1594 1205823 - 1205835 + r 75 -4.9 -4.93696 | overlap 1205814 AGTCATTTTTTCTCC GAAAA ATT TTTTC TTTTTGCTATTTGAA SAG1199 1206613 - 1206020 - | dTDP-4-keto-6-deoxyglucose-3,5-epimerase rfbA 1207482 - 1206613 - | glucose-1-phosphate thymidylyltransferase TERM 1595 1207485 - 1207497 + r 70 -6.3 -4.24745 | opp_overlap 1207475, overlap 1207475 TAATACCTTTCATAG TAAGG TCT CCTTA TTTATATTAATCCTA SAG1201 1208644 - 1207541 - | iminodiacetate oxidase, putative SAG1202 1209441 - 1208653 - | hypothetical protein SAG1203 1210114 - 1209431 - | hypothetical protein TERM 1596 1210209 - 1210173 - R 72 -3.7 -5.17488 | AACATCAAAAGAAAA GGAGCAGACCTAATG TATCAAC CATTCTGTCTCCTCC TAGTAAACTTATTCC SAG1204 1210898 - 1210218 - | DNA replication protein DnaD, putative apt 1211534 - 1211016 - | adenine phosphoribosyltransferase TERM 1597 1211655 - 1211617 - R 100 -14.2 -3.64184 | opp_overlap 1211625, overlap 1211618 1211625 AAATAGTACTGGAAA CTTTAAAACCATATGCTA GTT TTGCATATGGTTTTAAAA ATTAGGCATCTGTTA TERM 1598 1211654 - 1211618 - R 100 -15.5 -2.77787 | opp_overlap 1211625, overlap 1211617 1211625 AATAGTACTGGAAAC TTTAAAACCATATGCTA GTT TTGCATATGGTTTTAAA AATTAGGCATCTGTT TERM 1599 1211647 - 1211625 - R 88 -9.2 -4.24002 | opp_overlap 1211625, overlap 1211618 1211617 CTGGAAACTTTAAAA CCATATGCTA GTT TTGCATATGG TTTTAAAAATTAGGC TERM 1600 1211625 - 1211647 + r 85 -9.2 -4.14392 | opp_overlap 1211625 1211618 1211617 CTGGAAACTTTAAAA CCATATGCTA GTT TTGCATATGG TTTTAAAAATTAGGC SAG1206 1214221 - 1211657 - | hypothetical protein TERM 1601 1212828 - 1212844 + g 71 -5.1 -4.60041 | opp_overlap 1212827 1212826 1212843, overlap 1212820 1212830 1212843 TGGCCTTCCAAAACC GTTGGTT TCC AACCATC TTTTTGAAGATAAGT SAG1207 1214303 - 1214205 - | hypothetical protein TERM 1602 1214377 - 1214321 - R 85 -9.1 -3.97674 | opp_overlap 1214329 1214342, overlap 1214322 1214333 1214342 TTATTATTGAAATAA CTTATTTATATACCAAAAAAACCACTT AAA AAGTGGTTTCTTTAGTATATTATCAAC TCATCATAAAATCAT TERM 1603 1214376 - 1214322 - R 90 -12.6 -2.98122 | opp_overlap 1214329 1214342, overlap 1214321 1214333 1214342 TATTATTGAAATAAC TTATTTATATACCAAAAAAACCACTT AAA AAGTGGTTTCTTTAGTATATTATCAA CTCATCATAAAATCA TERM 1604 1214329 - 1214369 + r 100 -12.9 -3.34222 | opp_overlap 1214322 1214321 1214333 1214342, overlap 1214342 GAAATAACTTATTTA TATACCAAAAAAACCACTT AAA AAGTGGTTTCTTTAGTATA TTATCAACTCATCAT TERM 1605 1214365 - 1214333 - R 100 -13.7 -2.92389 | opp_overlap 1214329 1214342, overlap 1214322 1214321 1214342 TAACTTATTTATATA CCAAAAAAACCACTT AAA AAGTGGTTTCTTTAG TATATTATCAACTCA TERM 1606 1214342 - 1214356 + r 89 -8.6 -4.56113 | opp_overlap 1214342 1214333 1214322 1214321, overlap 1214329 TATATACCAAAAAAA CCACTT AAA AAGTGG TTTCTTTAGTATATT TERM 1607 1214356 - 1214342 - R 100 -8.6 -5.60864 | opp_overlap 1214329 1214342, overlap 1214333 1214322 1214321 TATATACCAAAAAAA CCACTT AAA AAGTGG TTTCTTTAGTATATT recJ 1216571 - 1214373 - | single-stranded-DNA-specific exonuclease RecJ TERM 1608 1216275 - 1216302 + g 85 -12.9 -2.64735 | TGCTTCTTTCATGAT TGATGCTGATG TCATTC CATCAGCATCA TAGTCTCCATAAACT TERM 1609 1216467 - 1216489 + g 70 -5.7 -4.38305 | gap 1, opp_overlap 1216467 1216466 1216470 1216471 ACCTCGCGAATAAAT TAAG-GAAGC CACC GCTTCACTTA TCTTTTCTTTTTTTG TERM 1610 1216513 - 1216535 + g 73 -9.2 -2.76696 | opp_overlap 1216518, overlap 1216518 TTTTTTGAAGCCTCA AAAAAGCCAG CGT CTGGCTTTTG GTTATTGAGGACCCA TERM 1611 1216518 - 1216530 + g 90 -9.1 -4.56133 | opp_overlap 1216518, overlap 1216513 TGAAGCCTCAAAAAA GCCAG CGT CTGGC TTTTGGTTATTGAGG TERM 1612 1216530 - 1216518 - G 100 -9.1 -5.055 | opp_overlap 1216513 1216518 TGAAGCCTCAAAAAA GCCAG CGT CTGGC TTTTGGTTATTGAGG SAG1209 1217329 - 1216568 - | short chain dehydrogenase/reductase family oxidoreductase SAG1210 1218260 - 1217331 - | ribonuclease Z SAG1211 1218949 - 1218302 - | hypothetical protein hflX 1220180 - 1218942 - | GTP-binding protein HflX miaA 1221161 - 1220271 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1613 1220759 - 1220771 + g 71 -4.9 -4.59773 | ATAAATCTTCATCAC TTAGA GAC TCTAA TTTTTCACGATAGGC TERM 1614 1221337 - 1221349 + G 74 -7.7 -3.83026 | AACAGCTGCTACTCT TGCAG GTG CTGCA TTTGCTATCAAAAAA SAG1214 1221272 - 1221448 + | hypothetical protein TERM 1615 1221482 - 1221453 - T 100 -16.7 -4.00042 | opp_overlap 1221453, overlap 1221456 TCTCTCATTAAATAA TAACTCCCTTACT AGCT AGTAAGGGAGTTA TTTTATATTAAATTG TERM 1616 1221453 - 1221482 + T 100 -16.7 -4.7033 | opp_overlap 1221453 1221456 TCTCTCATTAAATAA TAACTCCCTTACT AGCT AGTAAGGGAGTTA TTTTATATTAAATTG TERM 1617 1221479 - 1221456 - T 100 -14 -4.12603 | opp_overlap 1221453, overlap 1221453 CTCATTAAATAATAA CTCCCTTACT AGCT AGTAAGGGAG TTATTTTATATTAAA SAG1215 1222407 - 1221490 - | hypothetical protein TERM 1618 1222220 - 1222205 - G 72 -7.6 -3.78419 | opp_overlap 1222205, overlap 1222198 GTAGTAAAGACAGAA GCAATC AAAG GATTGC TTAACTCCTTCCTGC TERM 1619 1222371 - 1222389 + g 78 -6.7 -4.67168 | GCCCTAATACTAATC CCGCCAT CACTA ATGGTGG TTTTTCCCAATTTTT TERM 1620 1222514 - 1222491 - R 95 -10.4 -4.45664 | opp_overlap 1222491 TTAACTTAATGAAAA GAAGCTAGTC CATT GACTAACTTC TTTTTTAAGCTCTTC TERM 1621 1222491 - 1222514 + r 91 -8.2 -5.09173 | opp_overlap 1222491 TTAACTTAATGAAAA GAAGCTAGTC CATT GACTAACTTC TTTTTTAAGCTCTTC SAG1216 1226300 - 1222542 - | pullulanase, putative TERM 1622 1223784 - 1223752 - G 78 -10.5 -3.06796 | opp_overlap 1223756 GTTGACTTCATCCAA TCTTGGTCAGCTGGT TTA ACCGGCTGACCTTGA TCGCCTTGGAATGTT TERM 1623 1223756 - 1223780 + g 100 -16.5 -3.18681 | opp_overlap 1223752 ACTTCATCCAATCTT GGTCAGCTGGT TTA ACCGGCTGACC TTGATCGCCTTGGAA TERM 1624 1226459 - 1226420 - R 83 -11 -2.7961 | opp_overlap 1226430 1226451, overlap 1226430 AAACTATCAATAGCA TTACAAAAAAGCTAAGCA ATAT TGCCTAGCTTTTTTATCA AAAATTTCCTCATAT TERM 1625 1226449 - 1226430 - R 100 -8.6 -5.32882 | opp_overlap 1226430, overlap 1226420 TAGCATTACAAAAAA GCTAAGCA ATAT TGCCTAGC TTTTTTATCAAAAAT TERM 1626 1226430 - 1226449 + r 84 -6.4 -5.24531 | opp_overlap 1226430 1226420 TAGCATTACAAAAAA GCTAAGCA ATAT TGCCTAGC TTTTTTATCAAAAAT TERM 1627 1226801 - 1226786 - R 74 -6.8 -4.22346 | CAAAGTGAGCTAAAA CGTGCG CTTC CACACG GCCTATGGCAAATTC SAG1218 1227801 - 1227217 - | hypothetical protein TERM 1628 1227748 - 1227764 + g 74 -3.7 -5.24551 | overlap 1227749 ATTTTCTGTATAATT TTGATTC TGT GAATCAC TTTTTATTGCTTTAA SAG1219 1229304 - 1227898 - | dipeptidase PepV SAG1220 1229953 - 1229351 - | nitroreductase family protein TERM 1629 1229583 - 1229571 - G 72 -7.7 -3.65529 | opp_overlap 1229570 ATACCTGCATTTAAA GAGAG ATA CTCTC CAGTTTGTTTTTCAC TERM 1630 1229778 - 1229791 + g 100 -6.7 -6.09888 | CTTTCCGGTAAACCT TCTGC TAGA GCAGA TTTTTTTTCTTGGAC TERM 1631 1230488 - 1230475 - R 72 -2.5 -5.40072 | TCTTTCCTAAAAAAA TAAAA TCAC TTTTA GGACCACAGCTAATT TERM 1632 1231953 - 1231906 - R 87 -10.3 -3.57971 | opp_overlap 1231918, overlap 1231907 1231917 1231918 ATAGCGAGGGTTAAA TTAAATAAAAAGCTTAGTAGA ACAGTA TCTACTAAGTTTTTTATTTAG GAGGATCATTAAGAG TERM 1633 1231952 - 1231907 - R 100 -13.8 -2.74461 | opp_overlap 1231918, overlap 1231906 1231917 1231918 TAGCGAGGGTTAAAT TAAATAAAAAGCTTAGTAGA ACAGTA TCTACTAAGTTTTTTATTTA GGAGGATCATTAAGA TERM 1634 1231942 - 1231917 - R 82 -4.8 -5.41941 | opp_overlap 1231918, overlap 1231907 1231906 1231918 TAAATTAAATAAAAA GCTTAGTAGA ACAGTA TCTACTAAGT TTTTTATTTAGGAGG TERM 1635 1231941 - 1231918 - R 77 -8.3 -3.82724 | opp_overlap 1231918, overlap 1231917 1231907 1231906 AAATTAAATAAAAAG CTTAGTAGA ACAGTA TCTACTAAG TTTTTTATTTAGGAG TERM 1636 1231918 - 1231941 + r 100 -8.3 -5.63517 | opp_overlap 1231918 1231917 1231907 1231906 AAATTAAATAAAAAG CTTAGTAGA ACAGTA TCTACTAAG TTTTTTATTTAGGAG uvrC 1233727 - 1231946 - | excinuclease ABC subunit C SAG1223 1233886 - 1234653 + | hypothetical protein TERM 1637 1234686 - 1234666 - T 100 -6.2 -5.75599 | opp_overlap 1234666 1234668 TAAATGATAAAAAAA GACTTAGT AAAGA ACTAAGCC TTTTTGGTATAAATC SAG1224 1236052 - 1234712 - | MATE efflux family protein TERM 1638 1235298 - 1235284 - G 71 -5 -4.63527 | opp_overlap 1235275 CTACTACTGCAAAAA TTGCAA CTT CTGCAA AAATTTGTAAACCAA TERM 1639 1235373 - 1235385 + g 71 -4.9 -4.55128 | ATTCTTTCCAGAGTC CATAT ATG ATATG TTTTAATTTGAGGAT TERM 1640 1236146 - 1236125 - R 93 -9.5 -4.67011 | AATGCTATTTAAAAA GGTTGAGAA ATAA TCCTCAACC CCATTTTAGCTAAGC SAG1225 1236562 - 1236152 - | hypothetical protein SAG1226 1237069 - 1236572 - | hypothetical protein SAG1227 1237291 - 1237887 + | hypothetical protein TERM 1641 1238002 - 1237955 - f 77 -7.9 -4.11394 | opp_overlap 1237964, overlap 1237964 ATTCCAGCTGTAAAA TAGCAAGAACCCTCCTAAGTC TTAATG AACTTAGGAGGGTTTTTATCA ATATGAATAGGTTAC TERM 1642 1237964 - 1237993 + F 100 -12.3 -4.89852 | opp_overlap 1237955 1237964 GTAAAATAGCAAGAA CCCTCCTAAGT CTTAATGA ACTTAGGAGGG TTTTTATCAATATGA TERM 1643 1237993 - 1237964 - f 100 -13 -3.89411 | opp_overlap 1237964, overlap 1237955 GTAAAATAGCAAGAA CCCTCCTAAGTC TTAATG AACTTAGGAGGG TTTTTATCAATATGA SAG1228 1238076 - 1238366 + | ISSdy1, transposase OrfA SAG1229 1238402 - 1239181 + | ISSdy1, transposase OrfB TERM 1644 1239397 - 1239360 - f 83 -4.3 -5.58522 | gap 1, opp_overlap 1239355 1239360 GAGACAAAAGAAAAA CACTCCTG-TTGAAATTT AGT AAACTAGAAACAGGAGTG TTTTATTATGGTTAA SAG1230 1239405 - 1239695 + | hypothetical protein SAG1233 1243483 - 1241015 - | streptococcal histidine triad family protein TERM 1645 1241992 - 1242016 + g 74 -2.9 -5.33026 | overlap 1241993 TTGTTACTTTGCGAC TCACTTTTTTA GTG TCAAAGAGTGG TTTTTCTTTGCCTTG TERM 1646 1242726 - 1242742 + g 76 -6.5 -4.44608 | opp_overlap 1242725 GGGCGGTAATCAGAC GGTCTAG CAC CTCGACC TTGTTTTTGACTCCA TERM 1647 1243010 - 1243020 + g 73 -5.4 -4.62669 | overlap 1243015 AGTTCCTTTGGCTAC TTGC TCA GCAA TTTGTTGTTTGGTTC lmb 1244416 - 1243496 - | laminin-binding surface protein TERM 1648 1243559 - 1243583 + g 81 -11.5 -2.65274 | overlap 1243558 TAGATATGTCTTGTT TCCGCTTGGAG CAG CTTCAAGTGGA CTTAATGTCTTTACT TERM 1649 1244049 - 1244074 + g 79 -8.3 -4.14392 | TCCATATCTTCTAGC CCTTTGACTCT ATCT AGTGTCAGAGG TTTTGACGCTTCAAA SAG1235 1245927 - 1244650 - | GBSi1, group II intron, maturase TERM 1650 1244727 - 1244697 - G 72 -9.6 -2.64258 | opp_overlap 1244700, overlap 1244696 1244700 AGTAATCTAAGCAAC TGACCAGTCCTCGC TTT GCGAGGGCTGGTTT TGATATAGCACGTTT TERM 1651 1244724 - 1244700 - G 100 -15.7 -2.60988 | opp_overlap 1244700, overlap 1244697 1244696 AATCTAAGCAACTGA CCAGTCCTCGC TTT GCGAGGGCTGG TTTTGATATAGCACG TERM 1652 1244700 - 1244724 + g 100 -17.9 -4.34402 | opp_overlap 1244697 1244696 1244700 AATCTAAGCAACTGA CCAGTCCTCGC TTT GCGAGGGCTGG TTTTGATATAGCACG TERM 1653 1246478 - 1246452 - R 100 -16.8 -5.67063 | opp_overlap 1246452 1246454 1246456 1246458 CGTACTATAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 1654 1246452 - 1246478 + r 100 -16.8 -3.0792 | opp_overlap 1246452, overlap 1246454 1246456 1246458 CGTACTATAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 1655 1246454 - 1246476 + r 100 -15 -3.09505 | opp_overlap 1246452, overlap 1246452 1246456 1246458 TACTATAAAAAAATA GAGAGAACCA AAT TGGTTCTCTC TATTAAATAAGCTCT TERM 1656 1246456 - 1246474 + r 89 -11.8 -3.10522 | opp_overlap 1246452, overlap 1246454 1246452 1246458 CTATAAAAAAATAGA GAGAACCA AAT TGGTTCTC TCTATTAAATAAGCT TERM 1657 1246458 - 1246472 + r 72 -8.6 -3.11072 | opp_overlap 1246452, overlap 1246456 1246454 1246452 ATAAAAAAATAGAGA GAACCA AAT TGGTTC TCTCTATTAAATAAG TERM 1658 1250033 - 1250012 - R 100 -11.7 -4.73613 | opp_overlap 1250016 TGACCATTAAGAAAA GAGAGAATC AAAC GATTCTCTC CTAGCTATCCGTCTG TERM 1659 1250275 - 1250296 + r 100 -13.1 -3.38072 | opp_overlap 1250275 CTTTTAGACATAAAA GAGAGAACC GATC GGTTCTCTC TTGATGTTCACTCAG TERM 1660 1250296 - 1250275 - R 100 -13.1 -4.60797 | opp_overlap 1250275 CTTTTAGACATAAAA GAGAGAACC GATC GGTTCTCTC TTGATGTTCACTCAG TERM 1661 1250488 - 1250513 + r 100 -9.7 -5.52347 | TGTCTTAATCGGTTT GGTGTAGGAGT TCGC GCTCCTTCACC TTTTTTGCTTTTCTT SAG1237 1251949 - 1250615 - | hypothetical protein TERM 1662 1251283 - 1251301 + g 74 -7.6 -3.90286 | opp_overlap 1251283, overlap 1251274 1251278 1251277 CATAGTTATTATAAA TATAATCT AAA AGATTATA TTTAGCTTTATCATA TERM 1663 1251301 - 1251283 - G 74 -7.6 -3.98661 | opp_overlap 1251274 1251278 1251277 1251283 CATAGTTATTATAAA TATAATCT AAA AGATTATA TTTAGCTTTATCATA TERM 1664 1252044 - 1252023 - R 74 -5.9 -4.59424 | AAAGTTAAAGTAAAA GACCACATT TAAT AACGTGATC TTTCTATTTATCCTA SAG1238 1252665 - 1252057 - | hypothetical protein TERM 1665 1252240 - 1252226 - G 71 -7.2 -3.96148 | opp_overlap 1252219 1252217 1252226 TTTTTCCAGTACAAA TCAGTA TTG TACTGA TTGTCAACGTAATTA SAG1239 1252945 - 1252715 - | hypothetical protein TERM 1666 1252774 - 1252788 + g 91 -5.8 -5.76949 | GATAGCCTTTTTCTT TTGATA GCC TATCAA TTTTTTTTCGGACTG TERM 1667 1252961 - 1253000 + H 86 -9.7 -4.14908 | opp_overlap 1252967, overlap 1252967 ATTCATCCTCTTTCT TATAAACATAGTCATAT TTATGT ATATAACTATGTTTATA TTTGTAATTATATTT SAG1241 1253409 - 1253684 + | IS3 family transposase OrfA TERM 1668 1253717 - 1253741 + F 87 -8.6 -4.24204 | opp_overlap 1253719 CGGTTACGCTTTGAA CACGCCACAA CAACC TTGTGTCGTG TTTTACGTGTCAATC SAG1243 1254003 - 1254293 + | ISSdy1, transposase OrfA SAG1244 1254329 - 1255108 + | ISSdy1, transposase OrfB SAG1245 1255329 - 1255213 - | hypothetical protein SAG1246 1255316 - 1256485 + | hypothetical protein TERM 1669 1256492 - 1256517 + Tr 100 -17.7 -3.86194 | opp_overlap 1256492 CCATATTAAACAAAA CACCCCCACAA AATA TTGTGGGGGTG TTTGTGGGGAAGATT TERM 1670 1256517 - 1256492 - TR 100 -17.7 -4.97158 | opp_overlap 1256492 CCATATTAAACAAAA CACCCCCACAA AATA TTGTGGGGGTG TTTGTGGGGAAGATT TERM 1671 1256524 - 1256547 + Tr 100 -10.4 -5.16237 | GTGGGGGTGTTTGTG GGGAAGATTC AATT GAATCTTTCC TTTTTTAATCGCCTT SAG1247 1257879 - 1256680 - | phage integrase family site specific recombinase TERM 1672 1257881 - 1257922 + r 78 -9.7 -3.34089 | gap 1, overlap 1257879 1257882 CTTTTTGTTGCCATT TGGATTCTCACTTTCTAAAT GTT ATTTAGATAGTG-GAATCCC TATTAATTGTTCCAC TERM 1673 1257882 - 1257921 + r 100 -13.2 -2.59971 | gap 1, overlap 1257881 1257879 TTTTTGTTGCCATTT GGATTCTCACTTTCTAAAT GTT ATTTAGATAGTG-GAATCC CTATTAATTGTTCCA SAG1248 1258129 - 1257902 - | hypothetical protein TERM 1674 1258408 - 1258362 - R 83 -6.7 -4.86861 | gap 1, opp_overlap 1258362 CAACAAATAAATAAA GTCCCACCTAGAATTATTCAAT TGTC AATGAACAAATC-AGGAGGGAC TATTTTAAATTATTC SAG1249 1258632 - 1258408 - | Cro/CI family transcriptional regulator TERM 1675 1258756 - 1258714 - R 95 -9.3 -5.11389 | opp_overlap 1258714 1258711 ACAATAGAAATAAAA CTCCCAAACCGTTTATTTC TTTAC AAATTAGACGGTTTGAGAG TAGCTTTATTATACA SAG1250 1260678 - 1258813 - | Tn5252, relaxase TERM 1676 1259062 - 1259083 + g 74 -3.7 -5.0916 | overlap 1259064 GTTAACAACTACTTC TGCCATCTT GTTT AAGGTGGTG TTTTTGTCTTGAAGA TERM 1677 1259195 - 1259207 + g 76 -2 -5.4505 | opp_overlap 1259195, overlap 1259187 AATGTCATCAATAAA TTGA TTTCT TCAA TTTTTTGTTGAAGAC SAG1251 1261030 - 1260665 - | Tn5252, ORF 9 protein SAG1252 1261399 - 1261037 - | Tn5252, ORF 10 protein TERM 1678 1261573 - 1261523 - R 89 -8.5 -4.67556 | gap 1, overlap 1261526 ACAATATCCCAAAAA TCATATCGCCAGCTGACCAAAACC TTCC AGTTTTGA-CAGCCAACGATAAGA TAACTTGATGGCTCC TERM 1679 1261570 - 1261526 - R 74 -8.8 -3.25567 | gap 1, overlap 1261523 ATATCCCAAAAATCA TATCGCCAGCTGACCAAAACC TTCC AGTTTTGA-CAGCCAACGATA AGATAACTTGATGGC SAG1253 1263127 - 1261820 - | ISL3 family transposase TERM 1680 1262957 - 1262933 - G 90 -12.9 -3.27704 | opp_overlap 1262953 ACGGTTCAAATGTAA GCCCACTCGCT TTA AACGAATGGGC AAATCCATAATTAGT merA-1 1264927 - 1263287 - | mercuric reductase merR-1 1265348 - 1264956 - | mercuric resistance operon regulatory protein MerR TERM 1681 1265395 - 1265376 - R 82 -8.6 -4.06384 | CCTGAATATTATAAA CCATGTAC CATA GTACACGG TCAAGTAAATTGGAC TERM 1682 1266313 - 1266290 - R 84 -5.4 -5.33405 | gap 1, opp_overlap 1266294 1266296, overlap 1266296 TGCATTAAAGAAAAA CTAAA-AGGAC TTA GTCCTGTTCAG TATAGAATTAAATCC TERM 1683 1266306 - 1266296 - R 83 -6.8 -4.88326 | opp_overlap 1266294 1266296, overlap 1266290 AAAGAAAAACTAAAA GGAC TTA GTCC TGTTCAGTATAGAAT TERM 1684 1266462 - 1266495 + r 100 -9.8 -4.7629 | opp_overlap 1266468, overlap 1266463 ATCGTATAAACATTC TCCAAATTTCTCAA CATCAA TTGAGAAATTTGGC TTTTTCCGTTGCTCA TERM 1685 1266463 - 1266494 + r 100 -13.3 -3.45051 | opp_overlap 1266468, overlap 1266462 TCGTATAAACATTCT CCAAATTTCTCAA CATCAA TTGAGAAATTTGG CTTTTTCCGTTGCTC SAG1257 1268741 - 1266612 - | cation transporter E1-E2 family ATPase TERM 1686 1267165 - 1267175 + g 74 -4 -5.1244 | opp_overlap 1267165 GCTACGGCAATAAAC GAAA GAA TTTC TTTTTCTGTTCCTAA TERM 1687 1267215 - 1267228 + g 87 -2.4 -6.07374 | CGTTTTACCTTGAGT TTGC ATATCG GCAA TTTTTTCTTTTTTAT cadC 1269102 - 1268734 - | cadmium efflux system accessory protein TERM 1688 1269226 - 1269208 - H 81 -3.8 -5.68039 | opp_overlap 1269211, overlap 1269211 AAATTCATAAAAAAA GACTTGGA GTA CCCAATTC TAATAACAAAATAAC SAG1259 1269305 - 1269604 + | hypothetical protein TERM 1689 1269628 - 1269602 - T 76 -5.2 -5.10767 | opp_overlap 1269602 TACTTAACACAAAAA TAGGAACTGT TCAATTG ACTGTTCCTA TTTTTAATCTTCATA TERM 1690 1269602 - 1269628 + T 78 -5.9 -4.89233 | opp_overlap 1269602 TACTTAACACAAAAA TAGGAACTGTT CAATT GACTGTTCCTA TTTTTAATCTTCATA SAG1260 1270446 - 1269658 - | hypothetical protein SAG1261 1270455 - 1271051 + | hypothetical protein TERM 1691 1271080 - 1271111 + T 100 -11 -4.84017 | gap 1, opp_overlap 1271080 GGTTCATAAGAAAAA CAGGGCTCTCCAT CGAAAGC ATGG-GAGCCCTG TTTTTATCGAAAATT TERM 1692 1271111 - 1271080 - T 100 -11 -5.18726 | gap 1, opp_overlap 1271080 GGTTCATAAGAAAAA CAGGGCTCTCCAT CGAAAGC ATGG-GAGCCCTG TTTTTATCGAAAATT TERM 1693 1271156 - 1271203 + T 100 -10.6 -5.30155 | opp_overlap 1271158, overlap 1271158 TTTCCTTATACAGCA TACTAGCTGGTCTGACCCGATT CTGG AAGGGGGTCAAACCAGCCAGTG TTTTTTCGTTCCTGC TERM 1694 1271201 - 1271158 - T 100 -15.4 -2.88999 | opp_overlap 1271156 1271158 TCCTTATACAGCATA CTAGCTGGTCTGACCCGATT CTGG AAGGGGGTCAAACCAGCCAG TGTTTTTTCGTTCCT TERM 1695 1271158 - 1271201 + T 100 -11 -4.27681 | opp_overlap 1271158, overlap 1271156 TCCTTATACAGCATA CTAGCTGGTCTGACCCGATT CTGG AAGGGGGTCAAACCAGCCAG TGTTTTTTCGTTCCT SAG1262 1273312 - 1271225 - | cation transporter E1-E2 family ATPase SAG1264 1274714 - 1274268 - | transcriptional repressor CopY, putative TERM 1696 1274936 - 1274920 - R 84 -3.7 -5.87996 | overlap 1274922 TAAGCAAGAAAAAAA GTCAC TCAATAG GTGAC TATAGAACGTAGACA TERM 1697 1275109 - 1275069 - R 100 -8.7 -5.68489 | gap 2, opp_overlap 1275084 TAGAAGAACAAAAAA GATTGAAGAAAAATTGTCC CAAAT GGAC--TTTTTCTTCAATC TGAAAGCCCCATTTA TERM 1698 1275084 - 1275096 + r 75 -4.8 -5.12068 | opp_overlap 1275069 GATTGAAGAAAAATT GTCC CAAAT GGAC TTTTTCTTCAATCTG TERM 1699 1275130 - 1275115 - R 73 -7.5 -3.66178 | opp_overlap 1275115 TTCTTCAATCTGAAA GCCCC ATTTAA GGGGC TTTTTTATCTATAAA TERM 1700 1275115 - 1275130 + r 100 -7.5 -5.4251 | opp_overlap 1275115 TTCTTCAATCTGAAA GCCCC ATTTAA GGGGC TTTTTTATCTATAAA SAG1265 1275759 - 1275139 - | cadmium resistance transporter, putative TERM 1701 1275930 - 1275955 + H 83 -10.7 -3.20382 | opp_overlap 1275935, overlap 1275935 GGTGACCACTTCCAT GTAAAGTATAA CCCA TTATACTTTAC TTCGTAAATGTGGGC TERM 1702 1276167 - 1276141 - H 100 -10.9 -5.5762 | opp_overlap 1276141 ACCAAATATAAAAAA GCCCTGCCATC CAAAT GATAACAGGGC TTAACTTCAATATCC SAG1266 1276299 - 1276757 + | hypothetical protein SAG1267 1276791 - 1277117 + | hypothetical protein TERM 1703 1277141 - 1277173 + F 100 -12.3 -5.77571 | opp_overlap 1277135 1277134 1277144 AACTATAATGTTAAG TTAGAGAAAACATTT TAC AATTGTTTTCTCTAA TTTTTCTTTTTTAGT TERM 1704 1277170 - 1277144 - f 74 -9.6 -2.55551 | opp_overlap 1277141, overlap 1277135 1277134 TATAATGTTAAGTTA GAGAAAACATTT TAC AATTGTTTTCTC TAATTTTTCTTTTTT SAG1268 1277301 - 1277993 + | repressor protein, putative SAG1269 1277996 - 1278130 + | hypothetical protein TERM 1705 1278536 - 1278510 - g 100 -7.5 -5.50499 | opp_overlap 1278510, overlap 1278512 GTACATTCAAAAAAA TCTTGAAATAC AAAAA GTATTTCAAAA TTATGCAGATCCGAC TERM 1706 1279169 - 1279156 - g 84 -4.5 -5.48787 | AGAAGACATAAAAAA GCAAC TGTA GTCGC CATAAATGTAGGCTA SAG1270 1278136 - 1279551 + | ImpB/MucB/SamB family protein SAG1271 1279548 - 1279898 + | hypothetical protein SAG1272 1279885 - 1280193 + | hypothetical protein TERM 1707 1280174 - 1280208 + T 93 -10.9 -4.02163 | opp_overlap 1280181, overlap 1280178 1280181 CGAAGACACATATTT CAAAAAACAGGCCAA AATAA TTGGTCTGTTATTTG TTATTATTGCTCTCT TERM 1708 1280178 - 1280204 + T 74 -5.9 -4.58786 | opp_overlap 1280181, overlap 1280174 1280181 GACACATATTTCAAA AAACAGGCCAA AATAA TTGGTCTGTTA TTTGTTATTATTGCT TERM 1709 1280201 - 1280181 - T 76 -5.4 -5.08169 | opp_overlap 1280181 1280178 1280174 ACATATTTCAAAAAA CAGGCCAA AATAA TTGGTCTG TTATTTGTTATTATT TERM 1710 1280181 - 1280201 + T 82 -7.6 -4.37348 | opp_overlap 1280181, overlap 1280178 1280174 ACATATTTCAAAAAA CAGGCCAA AATAA TTGGTCTG TTATTTGTTATTATT SAG1273 1280558 - 1280202 - | hypothetical protein TERM 1711 1280543 - 1280523 - G 90 -9 -4.66833 | opp_overlap 1280523 CTTCAATTGTAAAAA GGTAGCCC GCATA GGACTACC TGACTTATAAATCAT SAG1274 1280937 - 1280548 - | hypothetical protein SAG1275 1281161 - 1280934 - | hypothetical protein TERM 1712 1281096 - 1281111 + g 70 -3.2 -4.91084 | overlap 1281097 GTGTTCCAATTTCTC AGTCTC ACGT GAGACC TTTTCTTCTTGCCTA SAG1276 1282291 - 1281215 - | hypothetical protein TERM 1713 1281744 - 1281762 + g 76 -2.4 -5.44119 | overlap 1281745 CTAATACCGACATGG CCATGAGA TCC TTTCATGA TTTTTTTGAGATAAC TERM 1714 1282330 - 1282312 - R 100 -9.6 -5.14563 | opp_overlap 1282312 CTCCCTATCAAAAAA GCAGAAGA CTG TCTCCTGC TAGTTGTTCTCGCTT SAG1277 1282821 - 1282330 - | hypothetical protein TERM 1715 1283057 - 1283038 - R 95 -8.6 -5.22006 | TTATCACAAGAAAAA GGACTACC CATT GGTAATCC TCCGTGTTAAACTAT SAG1278 1283354 - 1283064 - | hypothetical protein SAG1279 1283667 - 1283368 - | hypothetical protein SAG1280 1290562 - 1283738 - | SNF2 family protein TERM 1716 1290504 - 1290494 - G 73 -3.2 -5.0916 | opp_overlap 1290495, overlap 1290495 TTGGTAATATAAAAA TGCC TCA AGCA AGGCTCTATCACGAG TERM 1717 1290577 - 1290609 + r 100 -14.3 -2.55351 | opp_overlap 1290582, overlap 1290582 TTTTCCCTCCCATTT TAAAAGGGCTGAGAG TGT TTCTCAGCCCTTTGA GTTAATCTAGGACCA TERM 1718 1290604 - 1290582 - R 100 -13.5 -4.13767 | opp_overlap 1290577 1290582 CCTCCCATTTTAAAA GGGCTGAGA GTGTT TCTCAGCCC TTTGAGTTAATCTAG TERM 1719 1290582 - 1290604 + r 100 -14.2 -3.79787 | opp_overlap 1290582, overlap 1290577 CCTCCCATTTTAAAA GGGCTGAGAG TGT TTCTCAGCCC TTTGAGTTAATCTAG SAG1281 1291162 - 1290611 - | hypothetical protein SAG1282 1291337 - 1291146 - | calcium-binding protein, putative ssp-5 1296233 - 1291338 - | agglutinin receptor TERM 1720 1296349 - 1296359 + H 87 -5.4 -5.61596 | AACTTTCCGTTCTAT GAGA AAC TCTC TTTTTTTGTACAGCT TERM 1721 1296498 - 1296450 - H 100 -11.3 -5.10933 | TGAGGGAAAAGAAAA TGTTGCTTTTATACCACAAATAT TGT AAAATTGTAGTGTAAAAGCAACA AGTGGGGGGCCGTAT abiGI 1296512 - 1297102 + | abortive infection protein AbiGI abiGII 1297099 - 1297944 + | abortive infection protein AbiGII TERM 1722 1298030 - 1297984 - T 81 -10.6 -2.8978 | gap 1, opp_overlap 1297989, overlap 1297989 ATCGTGACATTAAAG GAAAAGGATATGCTAACTAAT CAAGTT ATT-GTTAGCATATCCTTTTT TATTTCGTCGTATAA TERM 1723 1297989 - 1298025 + T 100 -10.5 -5.68438 | gap 1, opp_overlap 1297989 1297984 GACATTAAAGGAAAA GGATATGCTAACTAAT CAAGTT ATT-GTTAGCATATCC TTTTTTATTTCGTCG TERM 1724 1298025 - 1297989 - T 95 -10.5 -4.6038 | gap 1, opp_overlap 1297989, overlap 1297984 GACATTAAAGGAAAA GGATATGCTAACTAAT CAAGTT ATT-GTTAGCATATCC TTTTTTATTTCGTCG SAG1286 1300831 - 1298030 - | Tn5252, Orf28 TERM 1725 1299952 - 1299938 - G 71 -5 -4.614 | opp_overlap 1299938 CGCAAGGACAGAAAA GAAAGT CAT ACTTCC CTTAATGGCTTGGAC SAG1287 1303163 - 1300833 - | Tn5252, Orf26 TERM 1726 1303555 - 1303527 - R 73 -4.5 -4.94222 | AATAAGCTATAAAAA GAGGAGGCGAG ATAGTGA CTCCCTTCCTC CTACATCCCCAAAAT SAG1289 1304410 - 1303556 - | Tn5252, Orf23 TERM 1727 1303634 - 1303618 - G 73 -8.7 -3.46813 | overlap 1303616 1303631 CAATGATTAACAATA TGGCCTG TAC CAAGCCA CCAAACATAATGGCG SAG1290 1304671 - 1304429 - | hypothetical protein TERM 1728 1304876 - 1304865 - R 74 -5.8 -4.56597 | TCTTGGTTCGAAAAA CAGG AACC CCTG CAATGCGTACGAGGC SAG1292 1306994 - 1306506 - | hypothetical protein TERM 1729 1307057 - 1307033 - R 81 -9.3 -3.86252 | opp_overlap 1307033 1307029 1307034, overlap 1307034 CCCTATCAAACATAA GGTGCTTCCAT AAT ACGGAAGCACT CTTGATTTTGGTATC TERM 1730 1307034 - 1307056 + r 85 -10.6 -3.44148 | opp_overlap 1307033 1307034, overlap 1307033 1307029 CCTATCAAACATAAG GTGCTTCCAT AAT ACGGAAGCAC TCTTGATTTTGGTAT TERM 1731 1307056 - 1307034 - R 100 -12.8 -2.91269 | opp_overlap 1307034 1307033 1307029, overlap 1307033 CCTATCAAACATAAG GTGCTTCCAT AAT ACGGAAGCAC TCTTGATTTTGGTAT SAG1293 1307655 - 1307071 - | protease, putative SAG1294 1307891 - 1307658 - | hypothetical protein SAG1295 1308283 - 1307900 - | hypothetical protein SAG1296 1308722 - 1308294 - | hypothetical protein SAG1297 1310061 - 1308706 - | C-5 cytosine-specific DNA methylase TERM 1732 1309334 - 1309350 + g 74 -4.3 -4.96762 | opp_overlap 1309334 1309337 TGATTGTCCTTAAAT CGACGAC CAT GTTGGCG TTTTTCTAGTCTATC TERM 1733 1309784 - 1309774 - G 73 -3.2 -5.10029 | overlap 1309764 AGCAATCTCAAAAAA GAGA GTC CCTC GAGTATCTTCAAATC TERM 1734 1310108 - 1310087 - R 83 -5.9 -5.26875 | TTTCCAACTAAAAAA GAGCCTTAC ACTT GTAAAACTC TTGCTTATATATGAT SAG1298 1310208 - 1310113 - | hypothetical protein SAG1299 1311028 - 1310210 - | hypothetical protein TERM 1735 1310463 - 1310479 + g 78 -3.7 -5.34555 | ACGCCATCGACTTTT GAAGTAA AGT TTTCTTC TTTTTTCTCATCTAC SAG1300 1311198 - 1311025 - | hypothetical protein TERM 1736 1311248 - 1311221 - R 100 -9.9 -4.87318 | overlap 1311222 TCCAAAACGCAAAAA TGGGGTAGACA ATCTAG TGTCTACCCCC GAAAGTTTATTAAAA TERM 1737 1311247 - 1311222 - R 100 -13.4 -3.51307 | overlap 1311221 CCAAAACGCAAAAAT GGGGTAGACA ATCTAG TGTCTACCCC CGAAAGTTTATTAAA TERM 1738 1311294 - 1311270 - R 100 -13 -5.50723 | opp_overlap 1311270 TTATTAAAACAAAAA TCCTGCCAAA GAATT TTTGGCAGGA TTTTTGGCAGGAAAC TERM 1739 1311270 - 1311294 + r 100 -13.7 -4.56597 | opp_overlap 1311270 TTATTAAAACAAAAA TCCTGCCAAAG AAT TTTTGGCAGGA TTTTTGGCAGGAAAC rplL 1311762 - 1311397 - | 50S ribosomal protein L7/L12 rplJ 1312326 - 1311826 - | 50S ribosomal protein L10 TERM 1740 1312392 - 1312371 - H 84 -3.7 -5.73339 | ATAAGCACAAAAAAA TCGCACCTA AACC TAGACACGA AAGTACAATACGTTA TERM 1741 1312612 - 1312569 - H 83 -5.8 -5.20216 | gap 1, opp_overlap 1312569 TATAGTACCAAAAAA TACTAAAATAGTTATCTTTAT ATC AAAAAAATAA-TATTTTAGTA TTTATTTATTGACCT TERM 1742 1313225 - 1313215 - g 72 -4 -4.91852 | GCTATCAAAAATAAA GAAA TCA TTTC GATAGATATTTCTAG TERM 1743 1313775 - 1313765 - g 70 -3.2 -4.96501 | CCTTAGAAAAAGAAA TCGC TGA GCAA AGAGACAAGCAAGAA SAG1303 1312759 - 1314867 + | ATP-dependent Clp protease, ATP-binding subunit TERM 1744 1314904 - 1314871 - T 100 -11.1 -5.19879 | opp_overlap 1314876, overlap 1314876 TCTGAAAGATAAAAA CAAAACCCGTTTGGA AGAA TCCAAGCGGGTTTTC TAGTGGATTGAAAAA TERM 1745 1314876 - 1314899 + T 100 -13.2 -4.48741 | opp_overlap 1314871 1314876 AAGATAAAAACAAAA CCCGTTTGGA AGAA TCCAAGCGGG TTTTCTAGTGGATTG SAG1304 1314949 - 1314851 - | hypothetical protein TERM 1746 1314899 - 1314876 - G 100 -11 -5.40873 | opp_overlap 1314876, overlap 1314871 AAGATAAAAACAAAA CCCGTTTGGA AGAA TCCAAGCGGG TTTTCTAGTGGATTG mmuM 1315904 - 1314960 - | homocysteine methyltransferase TERM 1747 1315025 - 1315037 + g 84 -7.7 -4.60041 | opp_overlap 1315025 AACAACCTCCGACAA CTTGG GCG CCAAG TTTTTGCCAGTCACT SAG1306 1317285 - 1315909 - | amino acid permease TERM 1748 1317015 - 1317005 - G 76 -6.8 -4.46404 | overlap 1316993 CAAGCAACAGTAAAA CCTG TTC CAGG ACTGATAAACTTAGT SAG1307 1318065 - 1317415 - | hypothetical protein SAG1308 1318726 - 1318223 - | hypothetical protein SAG1309 1318815 - 1318723 - | hypothetical protein SAG1310 1318818 - 1319366 + | TetR family transcriptional regulator TERM 1749 1319406 - 1319370 - T 100 -17.6 -5.25735 | gap 1, opp_overlap 1319370 TTAAAAAATTAAAAA GAGCTTTGCAGTAGTCT CAAC AG-CTACTGCAAAGCTC TTTTTGTCATAAACT TERM 1750 1319370 - 1319406 + T 100 -17.6 -4.91511 | gap 1, opp_overlap 1319370 TTAAAAAATTAAAAA GAGCTTTGCAGTAGTCT CAAC AG-CTACTGCAAAGCTC TTTTTGTCATAAACT SAG1311 1320024 - 1319428 - | GTPase EngB clpX 1321261 - 1320035 - | ATP-dependent protease ATP-binding subunit SAG1313 1321461 - 1321291 - | hypothetical protein folA 1321973 - 1321479 - | dihydrofolate reductase TERM 1751 1321507 - 1321527 + g 79 -8.3 -4.12456 | opp_overlap 1321507 1321510, overlap 1321510 TATGTCACAGTAAAA GCATGAGCA TTC TGCTCATCC TTTTCAAAATAATCT TERM 1752 1321527 - 1321507 - G 81 -8.3 -4.35116 | opp_overlap 1321507 1321510, overlap 1321510 TATGTCACAGTAAAA GCATGAGCA TTC TGCTCATCC TTTTCAAAATAATCT TERM 1753 1321524 - 1321510 - G 71 -8.6 -3.16202 | opp_overlap 1321510 1321507, overlap 1321507 GTCACAGTAAAAGCA TGAGCA TTC TGCTCA TCCTTTTCAAAATAA TERM 1754 1321510 - 1321524 + g 70 -8.6 -3.09004 | opp_overlap 1321507 1321510, overlap 1321507 GTCACAGTAAAAGCA TGAGCA TTC TGCTCA TCCTTTTCAAAATAA thyA 1322892 - 1322053 - | thymidylate synthase TERM 1755 1322158 - 1322137 - G 74 -2.9 -5.27779 | opp_overlap 1322140, overlap 1322139 TTTAATATCAAAAAA GTCTGTTCC ATCT GGAACATTC AATACTAGTTTGGGG SAG1316 1323046 - 1324218 + | HMG-CoA synthase SAG1317 1324220 - 1325503 + | 3-hydroxy-3-methylglutaryl-CoA reductase TERM 1756 1325482 - 1325536 + F 77 -9 -3.29324 | opp_overlap 1325478 1325477 1325496, overlap 1325496 TGTCAATAAACTTAC TAAAAGTAAAAAAAGAATTTGAGA AAAATCA TCTCAAATTCTTTTTTTACTTGAC TTGAATTTCCATAAG TERM 1757 1325522 - 1325496 - f 100 -8.2 -5.79588 | opp_overlap 1325482 1325496 CTAAAAGTAAAAAAA GAATTTGAGA AAAATCA TCTCAAATTC TTTTTTTACTTGACT TERM 1758 1325496 - 1325522 + F 100 -8.2 -5.64006 | opp_overlap 1325496, overlap 1325482 CTAAAAGTAAAAAAA GAATTTGAGA AAAATCA TCTCAAATTC TTTTTTTACTTGACT SAG1318 1325595 - 1326044 + | hypothetical protein SAG1319 1326049 - 1326693 + | hemolysin III, putative SAG1320 1326780 - 1327694 + | hypothetical protein TERM 1759 1327702 - 1327746 + F 100 -8.9 -5.59534 | gap 1, opp_overlap 1327697 1327702 1327705 TACCATAATATAAAA GGACCTAGACATA-AGTATT AGAGTA AATACTATCTGTCTAGGTTC TTTTTTGTTATACTT TERM 1760 1327746 - 1327702 - f 83 -6.7 -4.75289 | gap 1, opp_overlap 1327702, overlap 1327697 1327705 TACCATAATATAAAA GGACCTAGACATA-AGTATT AGAGTA AATACTATCTGTCTAGGTTC TTTTTTGTTATACTT TERM 1761 1328353 - 1328363 + G 73 -6.8 -4.24342 | AAAGAACACTTACTA GGAC AAC GTCC TTTCTTGCTCGGAGA SAG1321 1327795 - 1328649 + | hypothetical protein TERM 1762 1328690 - 1328651 - T 100 -18.2 -4.88293 | opp_overlap 1328651 1328659, overlap 1328659 AATGGGAAAAATAAA GCTAAAAAGCTAAGGC AATTCACA GCCTTAGCTTTTTAGC TATACTAGTCCAAAG TERM 1763 1328651 - 1328690 + T 100 -18.2 -2.82516 | opp_overlap 1328651 1328659, overlap 1328659 AATGGGAAAAATAAA GCTAAAAAGCTAAGGC AATTCACA GCCTTAGCTTTTTAGC TATACTAGTCCAAAG TERM 1764 1328659 - 1328682 + T 85 -8.2 -4.7173 | opp_overlap 1328659 1328651, overlap 1328651 AAATAAAGCTAAAAA GCTAAGGC AATTCACA GCCTTAGC TTTTTAGCTATACTA TERM 1765 1328682 - 1328659 - T 90 -8.2 -4.88295 | opp_overlap 1328651 1328659, overlap 1328651 AAATAAAGCTAAAAA GCTAAGGC AATTCACA GCCTTAGC TTTTTAGCTATACTA SAG1322 1328913 - 1328695 - | hypothetical protein SAG1323 1329976 - 1328981 - | isopentenyl pyrophosphate isomerase SAG1324 1330965 - 1329973 - | phosphomevalonate kinase mvaD 1331902 - 1330958 - | diphosphomevalonate decarboxylase SAG1326 1332762 - 1331884 - | mevalonate kinase, putative TERM 1766 1332486 - 1332467 - G 71 -8.6 -3.16689 | overlap 1332465 AAAACTGCACGAATA GCTGCAAT AGCA ACTGCAGC TGATGATCCCATACC TERM 1767 1332875 - 1332846 - R 100 -10.9 -4.37544 | opp_overlap 1332844 1332846 TGATAATAACATAAA TTAAAGGAACTAC AATT GCAGTCCCTTTAA TCTTAAATGTAAATG SAG1327 1334107 - 1332878 - | sensor histidine kinase TERM 1768 1334076 - 1334056 - G 81 -9.1 -4.07533 | overlap 1334059 AAAATAAGACAACAA GAATAGCTA GCG CAGCTATTC CGATAAAACGAAGTC SAG1328 1334793 - 1334107 - | DNA-binding response regulator SAG1329 1335421 - 1334795 - | GTP pyrophosphokinase family protein SAG1330 1335776 - 1335570 - | hypothetical protein TERM 1769 1335598 - 1335610 + g 73 -3.5 -5.11937 | opp_overlap 1335598 GTTATAAAGTTAAGA TAATT AGT AATTA TTTTTTCAAATTCTT TERM 1770 1336265 - 1336250 - R 84 -5.4 -5.49809 | opp_overlap 1336250 1336252, overlap 1336240 TAAATTGCAAAAAAA GCCATC AAAT GATGAC TTTTTATGTAGACTC SAG1331 1339367 - 1336428 - | R5 protein SAG1332 1340566 - 1340126 - | MarR family transcriptional regulator TERM 1771 1341108 - 1341078 - g 73 -6.2 -4.4572 | overlap 1341082 AAGATTTCAAACAAA CTAACCCTAATGGT GAA AGCATTAGGGTTCA AGCAGGCGATATGGT TERM 1772 1341104 - 1341082 - g 81 -9.2 -3.75884 | overlap 1341078 TTTCAAACAAACTAA CCCTAATGGT GAA AGCATTAGGG TTCAAGCAGGCGATA SAG1333 1340840 - 1342912 + | 5'-nucleotidase family protein TERM 1773 1342945 - 1342919 - T 100 -15.4 -5.39905 | opp_overlap 1342919 ATGAAATAATAAAAA TAGGTTTGGATA AAA TATCCAAACCTA TTTTTATATTAATAT TERM 1774 1342919 - 1342945 + T 100 -15.4 -5.13344 | opp_overlap 1342919 ATGAAATAATAAAAA TAGGTTTGGATA AAA TATCCAAACCTA TTTTTATATTAATAT SAG1334 1343359 - 1342949 - | peptide deformylase gdhA 1344778 - 1343429 - | glutamate dehydrogenase SAG1336 1344946 - 1345455 + | hypothetical protein TERM 1775 1345458 - 1345474 + T 100 -8.7 -5.80248 | opp_overlap 1345458 TATTAATTATTAAAA GGACATG TTT CGTGTCC TTTTTTTATCTATTG TERM 1776 1345474 - 1345458 - T 74 -6.5 -4.36411 | opp_overlap 1345458 TATTAATTATTAAAA GGACATG TTT CGTGTCC TTTTTTTATCTATTG SAG1337 1347265 - 1345496 - | ABC transporter, ATP-binding/permease protein TERM 1777 1345740 - 1345720 - G 71 -9.1 -3.15579 | overlap 1345722 CCAACCTTGTATCAA CAGATGAAG TCG CTTCATCTA AAATTAAAATTTTAG TERM 1778 1345738 - 1345722 - G 75 -9.5 -3.13899 | overlap 1345720 AACCTTGTATCAACA GATGAAG TCG CTTCATC TAAAATTAAAATTTT SAG1338 1349009 - 1347270 - | ABC transporter, ATP-binding/permease protein TERM 1779 1347566 - 1347581 + g 73 -5.4 -4.56597 | TAACAACAGCCCTAG CAATGG ATAA CCGTTG TTTTTGACCCCCAGA SAG1339 1349549 - 1349076 - | acetyltransferase SAG1340 1351414 - 1349546 - | ABC transporter, ATP-binding protein SAG1341 1352633 - 1351425 - | tRNA CCA-pyrophosphorylase TERM 1780 1352616 - 1352596 - G 100 -14.1 -3.6106 | opp_overlap 1352593 TTTAATATTGGTAAA GCCTTCTGA AAC TCAGAAGGC AAATAATTTAATCTC SAG1342 1353666 - 1352818 - | DegV family protein SAG1343 1354046 - 1353666 - | hypothetical protein TERM 1781 1353895 - 1353879 - G 73 -5.9 -4.52415 | ACGTACAATAACAAA TTGTAAC ACT GCTACAA TGCTCGTTACTTTTG SAG1344 1354651 - 1354118 - | hypothetical protein TERM 1782 1354685 - 1354666 - R 95 -8.6 -5.15634 | TATTGTAGCAAAAAA GCGCTTAT AAAA ACAAGCGC TAAGGCATGGGGGAA SAG1345 1355196 - 1354702 - | hypothetical protein SAG1346 1357349 - 1355385 - | PTS system, fructose specific IIABC components fruK 1358257 - 1357346 - | 1-phosphofructokinase lacR-1 1358997 - 1358254 - | lactose phosphotransferase system repressor TERM 1783 1359114 - 1359096 - R 72 -2.5 -5.46129 | gap 1, opp_overlap 1359097 1359098, overlap 1359097 1359098 CAATAAACTAAAAAA GCCTAATC TAAA GATTA-GC TTTTACAAATACTTT SAG1349 1360363 - 1359128 - | beta-lactam resistance factor TERM 1784 1360310 - 1360298 - G 71 -4.9 -4.56775 | opp_overlap 1360298 1360301 AGGTGTTTGTAAAAA TGATT GTG AATCA TAATTTCCTGAATGT TERM 1785 1360510 - 1360479 - R 81 -10.4 -2.85109 | opp_overlap 1360479 1360484, overlap 1360484 ACACACATAATATTA GTAAAGCTAAATCT AAAA AGATTTAGCTTTAA ATTTCAATATAGCGA TERM 1786 1360479 - 1360510 + r 81 -10.4 -2.82327 | opp_overlap 1360479 1360484, overlap 1360484 ACACACATAATATTA GTAAAGCTAAATCT AAAA AGATTTAGCTTTAA ATTTCAATATAGCGA TERM 1787 1360484 - 1360505 + r 89 -10.3 -3.86311 | opp_overlap 1360484 1360479, overlap 1360479 CATAATATTAGTAAA GCTAAATCT AAAA AGATTTAGC TTTAAATTTCAATAT TERM 1788 1360505 - 1360484 - R 89 -10.3 -3.8572 | opp_overlap 1360479 1360484, overlap 1360479 CATAATATTAGTAAA GCTAAATCT AAAA AGATTTAGC TTTAAATTTCAATAT SAG1350 1362141 - 1360507 - | surface antigen-related protein TERM 1789 1362345 - 1362327 - R 77 -4.5 -5.2422 | opp_overlap 1362327 AAGCATATCAAAAAA CCGGG CACTATTCT CCCGG TTGATTATTATTTTA SAG1351 1363276 - 1362353 - | 2-dehydropantoate 2-reductase SAG1352 1364359 - 1363289 - | hypothetical protein SAG1353 1365488 - 1364496 - | pyridine nucleotide-disulphide oxidoreductase family protein trmD 1366224 - 1365469 - | tRNA (guanine-N(1)-)-methyltransferase rimM 1366729 - 1366211 - | 16S rRNA-processing protein TERM 1790 1366785 - 1366764 - R 90 -5.8 -5.70761 | AAAATAAAAGAAAAA CCAGCCGC TAAAAT GCAACTGG CCACGATAGTCCGTA SAG1356 1368562 - 1367051 - | RofA family transcriptional regulator TERM 1791 1368651 - 1368634 - R 76 -3.5 -5.36314 | gap 1, overlap 1368636 TAAAAGACTAAAAAA CT-CACAA TTT TTGTGTAG ATATAACAAAAAAGA TERM 1792 1368681 - 1368665 - R 100 -7.3 -5.62045 | opp_overlap 1368665 AGATATAACAAAAAA GACAGGA AGT TCCTATC TTTTAGAATAAATTA TERM 1793 1368703 - 1368717 + r 76 -8.6 -3.54575 | AATAAATTATTCTTT CTCATC AAT GATGAG TCTTACTTTTTTCCC SAG1357 1368936 - 1368694 - | KH domain-containing protein rpsP 1369218 - 1368946 - | 30S ribosomal protein S16 TERM 1794 1369303 - 1369341 + r 86 -3.9 -5.85737 | opp_overlap 1369309, overlap 1369305 1369306 1369307 TAAGTATAACATAAA TACAAACTCTGTCAAGA AAAAA TCTTGACAGAGTACATG TTTTTTTATTCATAT TERM 1795 1369307 - 1369337 + r 86 -11.3 -2.56947 | opp_overlap 1369309, overlap 1369306 1369305 1369303 TATAACATAAATACA AACTCTGTCAAGA AAAAA TCTTGACAGAGTA CATGTTTTTTTATTC TERM 1796 1369335 - 1369309 - R 100 -13.9 -4.45693 | opp_overlap 1369307 1369306 1369305 1369303 TAACATAAATACAAA CTCTGTCAAGA AAAAA TCTTGACAGAG TACATGTTTTTTTAT SAG1359 1370594 - 1369347 - | permease, putative TERM 1797 1369606 - 1369616 + g 72 -8.2 -3.53091 | overlap 1369613 ATTTTACGTCGAGTT GCCC CAA GGGC TTTACGAAGGCCAAT TERM 1798 1370177 - 1370217 + g 76 -3.4 -5.42259 | overlap 1370185 ACTTTTTGATACCAA GGTAAGTGCGGTTAAT TCCTGTTAT ATTAACCGTCTTTGCC TTTTTTTCAAGGTAA SAG1360 1371319 - 1370609 - | ABC transporter, ATP-binding protein SAG1361 1372566 - 1371322 - | hypothetical protein TERM 1799 1372605 - 1372650 + r 74 -5.2 -4.81083 | AATATAGAACAAGTG TATTATTTTTAAATAATATT GTCAAG AAAATTCTTTAAAAATAATA TTTTTACTCATTAAG TERM 1800 1372757 - 1372728 - R 100 -15.3 -3.96327 | opp_overlap 1372733, overlap 1372733 ACTTTTTACCACAAA TAAAAGCTGAGAT ATAG ATCTCAGCTTTTA TTAAGAATTGCTAAA TERM 1801 1372752 - 1372733 - R 100 -10.8 -5.02323 | opp_overlap 1372733, overlap 1372728 TTACCACAAATAAAA GCTGAGAT ATAG ATCTCAGC TTTTATTAAGAATTG TERM 1802 1372733 - 1372752 + r 100 -10.8 -4.65747 | opp_overlap 1372728 1372733 TTACCACAAATAAAA GCTGAGAT ATAG ATCTCAGC TTTTATTAAGAATTG SAG1362 1374366 - 1372768 - | carbamoyl-phosphate synthase, large subunit, putative carA-2 1375492 - 1374422 - | carbamoyl phosphate synthase small subunit pyrR 1376062 - 1375541 - | pyrimidine regulatory protein PyrR TERM 1803 1376108 - 1376087 - R 74 -5.9 -4.66537 | gap 1, overlap 1376090 CTCTCTAAGATAAAA GAG-CCCCTT CAA AAGGAGACTC TCTAGAATGACAAAG SAG1365 1377128 - 1376238 - | ribosomal large subunit pseudouridine synthase D lspA 1377576 - 1377112 - | lipoprotein signal peptidase SAG1367 1378490 - 1377585 - | LysR family transcriptional regulator TERM 1804 1378694 - 1378671 - R 95 -9 -4.95547 | opp_overlap 1378671 1378673 CTGACAATAATAAAA GACCTTATGA ATAG TCATAAAGTC TTAACTAGGCATTAT rpmA 1378990 - 1378706 - | 50S ribosomal protein L27 SAG1369 1379359 - 1379021 - | hypothetical protein rplU 1379680 - 1379366 - | 50S ribosomal protein L21 TERM 1805 1379784 - 1379798 + r 77 -8.6 -3.74747 | CGATTTTCGCGCGGT TGCACA GGA TGTGCA TTTAGTCAACATTCA TERM 1806 1379872 - 1379856 - R 71 -3.1 -5.26907 | CAAGATAAAACAAAA TAAAATT ATC AACTTTA CCACTTCAAATTAAC SAG1371 1381048 - 1379870 - | hypothetical protein TERM 1807 1381137 - 1381119 - R 100 -7.5 -5.46657 | opp_overlap 1381119 CATTTTAATAAAAAA CTACAGA GTAAA TCTGTAG TTTAAAAATTCATTA TERM 1808 1381119 - 1381137 + r 73 -7.5 -3.62478 | opp_overlap 1381119 CATTTTAATAAAAAA CTACAGA GTAAA TCTGTAG TTTAAAAATTCATTA thiI 1382364 - 1381150 - | thiamine biosynthesis protein ThiI iscS-2 1383511 - 1382366 - | cysteine desulphurase TERM 1809 1383672 - 1383692 + H 75 -2.7 -5.67283 | overlap 1383675 AATAACCTAGGTTGC TTATTTAAA TGT TTTAAATTA TTTTTTCTTTAGCTT TERM 1810 1383675 - 1383689 + H 70 -4.4 -4.88687 | overlap 1383672 AACCTAGGTTGCTTA TTTAAA TGT TTTAAA TTATTTTTTCTTTAG TERM 1811 1383801 - 1383790 - g 76 -4.4 -5.18995 | AAGACAACAGAAAAA GTCT ACTA AGAC TAATACTGATTCAAC SAG1374 1383758 - 1384210 + | hypothetical protein TERM 1812 1384207 - 1384237 + T 87 -10.6 -3.59252 | opp_overlap 1384215, overlap 1384215 AAATACAACAACACC TTAAAAAAGCTAGG TTC CCTAGCTTTTTTTG TATTCTTTGATAGCG TERM 1813 1384229 - 1384215 - T 100 -10 -5.09173 | opp_overlap 1384207 1384215 CAACACCTTAAAAAA GCTAGG TTC CCTAGC TTTTTTTGTATTCTT TERM 1814 1384215 - 1384229 + T 100 -10 -5.86465 | opp_overlap 1384215, overlap 1384207 CAACACCTTAAAAAA GCTAGG TTC CCTAGC TTTTTTTGTATTCTT gor 1385602 - 1384253 - | glutathione reductase TERM 1815 1385782 - 1385728 - R 100 -16.2 -4.00782 | opp_overlap 1385734 1385736 1385744, overlap 1385729 1385734 1385744 GTAGACTATCATAAA TTGAAATATTATAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATAATATTACAT CAAGTCCTGCATGGG TERM 1816 1385781 - 1385729 - R 100 -19.7 -2.99987 | opp_overlap 1385734 1385736 1385744, overlap 1385728 1385734 1385744 TAGACTATCATAAAT TGAAATATTATAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATAATATTACA TCAAGTCCTGCATGG TERM 1817 1385776 - 1385734 - R 100 -18.2 -3.90286 | opp_overlap 1385734 1385736 1385744, overlap 1385729 1385728 1385744 TATCATAAATTGAAA TATTATAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATAATA TTACATCAAGTCCTG TERM 1818 1385734 - 1385776 + r 100 -13.8 -3.07113 | opp_overlap 1385734 1385729 1385728 1385744, overlap 1385736 1385744 TATCATAAATTGAAA TATTATAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATAATA TTACATCAAGTCCTG TERM 1819 1385736 - 1385774 + r 89 -12 -3.09327 | opp_overlap 1385734 1385729 1385728 1385744, overlap 1385734 1385744 TCATAAATTGAAATA TTATAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATAA TATTACATCAAGTCC TERM 1820 1385766 - 1385744 - R 90 -9.2 -4.58303 | opp_overlap 1385736 1385734 1385744, overlap 1385734 1385729 1385728 TGAAATATTATAAAA GAGAAAACTC AAG GAGCTCTCTC TTTTATAATATTACA SAG1376 1386112 - 1385777 - | hypothetical protein aroC 1387362 - 1386196 - | chorismate synthase aroB 1388430 - 1387363 - | 3-dehydroquinate synthase TERM 1821 1388310 - 1388324 + g 76 -5.8 -4.56367 | overlap 1388301 CTACGTTACTATCTG TGATAA TAG TTATCA TTTGTTTCTGCCATA TERM 1822 1388487 - 1388469 - R 80 -5.3 -5.2015 | gap 1 TTAATAAGACAAAAA CCCTAAGC AATT GCT-AGGG ATCTCATCAGTATAT aroD 1389201 - 1388524 - | 3-dehydroquinate dehydratase SAG1380 1390358 - 1389201 - | hypothetical protein TERM 1823 1390260 - 1390250 - G 78 -5.4 -5.03314 | opp_overlap 1390250 TTGACTGTGAAAAAA GTTG AAC CAAC TGGTTAACTAAACTG SAG1381 1390493 - 1392637 + | sulfatase TERM 1824 1392662 - 1392687 + T 100 -10.5 -4.83615 | opp_overlap 1392653 1392663, overlap 1392663 TTTAAAGTTTAATCC ACACCTCAATC CAAC GATTGAGGTGC TTTTTATACGGAATA TERM 1825 1392686 - 1392663 - T 100 -14 -2.56046 | opp_overlap 1392662 1392663, overlap 1392653 TTAAAGTTTAATCCA CACCTCAATC CAAC GATTGAGGTG CTTTTTATACGGAAT TERM 1826 1392663 - 1392686 + T 100 -14 -3.49687 | opp_overlap 1392663 1392653, overlap 1392662 TTAAAGTTTAATCCA CACCTCAATC CAAC GATTGAGGTG CTTTTTATACGGAAT TERM 1827 1392801 - 1392774 - T 100 -8.6 -5.95449 | opp_overlap 1392774 AAATAAAACAAAAAA GTTTCATTCTAC ATAT ATAGAACGAAAC TTTTCACTAAAATTA TERM 1828 1392852 - 1392867 + T 74 -3.2 -5.39221 | opp_overlap 1392852 1392843, overlap 1392844 TAGTAATTAAAAAAA GTTAGG CAAA CCCAAC TTTTTTAATTCTTAT TERM 1829 1392867 - 1392852 - T 87 -5.4 -5.65513 | opp_overlap 1392844 1392852, overlap 1392843 TAGTAATTAAAAAAA GTTAGG CAAA CCCAAC TTTTTTAATTCTTAT rplT 1393238 - 1392879 - | 50S ribosomal protein L20 rpmI 1393496 - 1393296 - | 50S ribosomal protein L35 infC 1394066 - 1393536 - | translation initiation factor IF-3 TERM 1830 1394118 - 1394095 - R 100 -13.2 -4.40526 | TAGAGAAAAACGAAA GCGGACTTGA TAAA TCAAGCCCGC ACATATAATCTTCCT cmk 1394910 - 1394227 - | cytidylate kinase SAG1386 1395445 - 1394921 - | hypothetical protein SAG1387 1395491 - 1395688 + | ferredoxin, 4Fe-4S TERM 1831 1395671 - 1395692 + T 100 -9.5 -5.31275 | opp_overlap 1395671 TCATGTCCCACCAAA GCTCTTACG ATTT TGTAAGAGC TTTTTTATCGTAGCG TERM 1832 1395692 - 1395671 - T 77 -8.8 -3.73224 | opp_overlap 1395671 TCATGTCCCACCAAA GCTCTTAC GATTTT GTAAGAGC TTTTTTATCGTAGCG SAG1388 1396166 - 1395675 - | hypothetical protein TERM 1833 1396101 - 1396079 - G 81 -4.3 -5.25906 | gap 1, overlap 1396069 ATAAACCAATAAAAA TTGGTGCAAT GGCT ATTG-ACCAA TAAATAATAGCCCAA pepT 1397415 - 1396195 - | peptidase T TERM 1834 1397325 - 1397307 - G 77 -10.4 -2.79518 | opp_overlap 1397306 1397311, overlap 1397306 1397311 TTAAAACTGTTAAAG CAAAGTCA ACT TGACTTTG AGTTGTTGGCGTTTG TERM 1835 1397542 - 1397515 - R 100 -12.2 -5.00616 | opp_overlap 1397515 TTGGTCGTCAAAAAA CTAGGTTAAACA ATTC TGTCTAACCTAG TTTTTCATTAGTTAA TERM 1836 1397515 - 1397542 + r 100 -10 -4.93547 | opp_overlap 1397515 TTGGTCGTCAAAAAA CTAGGTTAAACA ATTC TGTCTAACCTAG TTTTTCATTAGTTAA SAG1390 1399184 - 1397550 - | polysaccharide biosynthesis protein, putative TERM 1837 1397998 - 1397982 - G 78 -9.5 -3.58343 | opp_overlap 1397985, overlap 1397985 1397986 TTTACGATTTTCAAA CAATGCT TGT AGCATTG GTGCTAAAACAGTAT murE 1399308 - 1400762 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1838 1400856 - 1400869 + F 74 -3.1 -5.48787 | overlap 1400849 ATTAATGCTAAAAAA GGCTT TTGT AAGTC TTTTTTCTATGTTAT SAG1392 1400918 - 1401712 + | iron compound ABC transporter, ATP-binding protein TERM 1839 1402147 - 1402115 - g 76 -2 -5.42862 | overlap 1402116 ATACTCTGAAAAAAA TTGCACCAACTTTA GTTAT TAAATATGGTGCAC AAAATTATTTAGATA SAG1393 1401736 - 1402668 + | iron compound ABC transporter, substrate-binding protein TERM 1840 1402719 - 1402741 + G 79 -3.5 -5.52384 | ACTCGTTCAAAAAAA TAAGTCAAA TCATT TTTGGCTTG TTTTTTTCATAACAC SAG1394 1402684 - 1403709 + | iron compound ABC transporter, permease protein SAG1395 1403706 - 1404707 + | iron compound ABC transporter, permease protein TERM 1841 1404744 - 1404700 - T 78 -9.7 -3.27406 | gap 1, opp_overlap 1404704 1404712, overlap 1404712 GGTTGATGACAAAAG TTGAC-TAAAAAAGACTGGA CAAACT TCCAGTCTTTTTTATGTTAA GTAAATCTTTAAAGC TERM 1842 1404704 - 1404740 + T 83 -10.5 -3.10701 | gap 1, opp_overlap 1404700 1404712, overlap 1404712 GATGACAAAAGTTGA C-TAAAAAAGACTGGA CAAACT TCCAGTCTTTTTTATG TTAAGTAAATCTTTA TERM 1843 1404712 - 1404731 + T 100 -7.9 -5.48063 | opp_overlap 1404712 1404700, overlap 1404704 AAGTTGACTAAAAAA GACTGGA CAAACT TCCAGTC TTTTTTATGTTAAGT TERM 1844 1404731 - 1404712 - T 91 -7.9 -5.16237 | opp_overlap 1404704 1404712, overlap 1404700 AAGTTGACTAAAAAA GACTGGA CAAACT TCCAGTC TTTTTTATGTTAAGT SAG1396 1405389 - 1404736 - | hypothetical protein TERM 1845 1405275 - 1405289 + g 83 -5.8 -5.19251 | TTTTAGAATAGTCTG TAAAGT GGG ACTTTA TTTTTCTTAGTGTTA TERM 1846 1405434 - 1405421 - R 87 -5.2 -5.55664 | opp_overlap 1405421 GTATGACTAAAAAAA CGGG ACGCAG CCCG TTTTACATGATTAAT ppa 1406384 - 1405449 - | putative manganese-dependent inorganic pyrophosphatase TERM 1847 1406494 - 1406478 - R 93 -8.1 -5.26875 | TTTGCAACTAAAAAA GTTGAAT AAA ATTCAAC TTAAAACTAATTTTG pflA-2 1407289 - 1406501 - | pyruvate formate-lyase-activating enzyme TERM 1848 1407345 - 1407362 + r 93 -8.5 -4.76312 | opp_overlap 1407345 TTTTCATGAAAAAAA GACTAAG TAAT CTTAGTC TTTTTCAATATTCTG TERM 1849 1407362 - 1407345 - R 100 -8.5 -5.52384 | opp_overlap 1407345 TTTTCATGAAAAAAA GACTAAG TAAT CTTAGTC TTTTTCAATATTCTG SAG1399 1408691 - 1407357 - | CBS domain-containing protein SAG1400 1409437 - 1408871 - | hypothetical protein TERM 1850 1409248 - 1409258 + g 73 -6.8 -4.21644 | overlap 1409252 CGTTAGAGATCCCTT GCTC CGT GAGC TTTGCTTTCGTTTTT TERM 1851 1409252 - 1409268 + g 74 -4.3 -4.90136 | overlap 1409248 AGAGATCCCTTGCTC CGTGAGC TTT GCTTTCG TTTTTGCTATTGCTT SAG1401 1410365 - 1409430 - | hypothetical protein TERM 1852 1410451 - 1410426 - R 87 -5.5 -5.52347 | opp_overlap 1410421 1410426 AATAAAACTAAAAAA GATTGGAAC GTCAGTTA GTCCCAATC TTTTATTTACTTCAC SAG1402 1411099 - 1410458 - | PAP2 family protein TERM 1853 1410612 - 1410601 - G 80 -2.2 -5.64006 | overlap 1410610 ACCCAATTAAAAAAA TGAG CAAA CCCA AAGTACCTTGGCACA SAG1403 1411664 - 1411080 - | hypothetical protein TERM 1854 1411645 - 1411631 - G 70 -6.4 -4.11906 | opp_overlap 1411631 ATAAGGCAGAAAGAA TGGCGA TTG TCACCA TTTTACGTGTATTTG TERM 1855 1411699 - 1411672 - R 100 -7.2 -5.60993 | TTTGTCATAAAAAAA TTCCTCCAATTT AAAT AAATTGAAAGAA GCTCCAAAGGTAAGC TERM 1856 1411897 - 1411910 + r 88 -6.7 -5.30155 | opp_overlap 1411897, overlap 1411890 GCATAACAAAAAAAA CTTGC AATT GCAAG TTTTTTAATTACTAA TERM 1857 1411910 - 1411897 - R 100 -6.7 -6.17268 | opp_overlap 1411890 1411897 GCATAACAAAAAAAA CTTGC AATT GCAAG TTTTTTAATTACTAA SAG1404 1412891 - 1411965 - | cell wall surface anchor family protein SAG1405 1413772 - 1412888 - | sortase family protein SAG1406 1414653 - 1413772 - | sortase family protein TERM 1858 1414599 - 1414615 + g 100 -2.3 -6.60239 | opp_overlap 1414599, overlap 1414599 AAAGAATGATAAAAG GAAGA TTTGACT TCTTC TTTTTTTTTGTTTTT TERM 1859 1414672 - 1414730 + r 100 -15.7 -3.67141 | gap 1, opp_overlap 1414691 1414693 1414721 1414724, overlap 1414675 1414724 ATCTCCTAGATAATG GCTCTTGCTTATGATCTAAGAGTACTTC TACT GAAATACCCTTAGATCATAAGCAC-AGC TTTAACTGCGCTTAT TERM 1860 1414675 - 1414729 + r 100 -16.9 -2.79803 | gap 1, opp_overlap 1414691 1414693 1414721 1414724, overlap 1414672 1414724 TCCTAGATAATGGCT CT-TGCTTATGATCTAAGAGTACTTC TACT GAAATACCCTTAGATCATAAGCACAG CTTTAACTGCGCTTA SAG1407 1416882 - 1414765 - | cell wall surface anchor family protein TERM 1861 1414846 - 1414879 + g 76 -2.4 -5.54907 | opp_overlap 1414842 1414856, overlap 1414847 AATTGTGAAAAGAAT TGTACCAATACCAC CTGTTT GTGGGATTGTTACC TTTTTATTTTCTACA TERM 1862 1415466 - 1415485 + g 71 -5 -4.53707 | CAGAATCTTTGGTAT TGGTAATG GTTA CTTTACCA TTTTCTAGATTTATT TERM 1863 1416037 - 1416053 + g 72 -8.1 -3.64198 | opp_overlap 1416036 AACAGTTGAACCCAT TGTCAAA CCA TTTGACA TTATATCTGTCCAAA SAG1408 1419717 - 1417012 - | cell wall surface anchor family protein TERM 1864 1417725 - 1417737 + g 73 -6.3 -4.45117 | opp_overlap 1417724 1417725 CTCCTAAATTCAAAC CTCTA ACA TAGAG TTTATTTCCGATGTA TERM 1865 1421488 - 1421468 - R 80 -5.5 -5.17744 | overlap 1421470 ATACAGGAAGAAAAA TATTGCAAA CTT TTTGCAAAA ACTAATGAAATAACT TERM 1866 1421486 - 1421470 - R 83 -8.1 -4.20491 | overlap 1421468 ACAGGAAGAAAAATA TTGCAAA CTT TTTGCAA AAACTAATGAAATAA TERM 1867 1421531 - 1421582 + r 100 -28 -5.48825 | opp_overlap 1421531 1421544 TATAACTCTTAAAAA TTAACATTAAAAAGCTAGAGCATT GTGT AATGCTCTAGCTTTTTAATGTTAA TTTTTTTGAATAATA TERM 1868 1421582 - 1421531 - R 100 -28 -4.63542 | opp_overlap 1421531, overlap 1421544 TATAACTCTTAAAAA TTAACATTAAAAAGCTAGAGCATT GTGT AATGCTCTAGCTTTTTAATGTTAA TTTTTTTGAATAATA TERM 1869 1421569 - 1421544 - R 100 -14.9 -4.90136 | opp_overlap 1421531, overlap 1421531 AATTAACATTAAAAA GCTAGAGCATT GTGT AATGCTCTAGC TTTTTAATGTTAATT SAG1410 1422718 - 1421579 - | glycosyl transferase, group 1 family protein SAG1411 1423556 - 1422708 - | glycosyl transferase, group 2 family protein SAG1412 1424977 - 1423553 - | polysaccharide biosynthesis protein SAG1413 1426341 - 1424977 - | hypothetical protein TERM 1870 1425979 - 1425967 - G 70 -5.5 -4.40561 | TTTGCCTAAAAATAA GCCAA CTG CTGGC ACAAGATGACCCCAA SAG1414 1427269 - 1426343 - | glycosyl transferase, group 2 family protein TERM 1871 1426442 - 1426466 + g 74 -5.2 -4.87786 | gap 1 CATTTGTTTAAGTAT TGCTACAAAAT CTTT ATTTTG-AGCA TTTTTATAACGTTGC SAG1415 1428234 - 1427299 - | glycosyl transferase, group 2 family protein TERM 1872 1427889 - 1427877 - G 76 -7.7 -4.18018 | opp_overlap 1427877 CGTCTGCACTCAAAA CCTCA ATT TGAGG TTTATCTGACATAAT TERM 1873 1427877 - 1427889 + g 76 -7.7 -4.053 | opp_overlap 1427877 CGTCTGCACTCAAAA CCTCA ATT TGAGG TTTATCTGACATAAT SAG1416 1429294 - 1428236 - | nucleotide sugar dehydratase, putative SAG1417 1430016 - 1429294 - | nucleotidyl transferase, putative SAG1418 1430840 - 1430016 - | polysaccharide biosynthesis protein, putative TERM 1874 1430511 - 1430498 - G 73 -3.1 -5.17744 | AGATATCAATAAAAA TCCCT GTCC AAGGA TGAATTCTATCTGTT SAG1419 1432598 - 1430865 - | hypothetical protein SAG1420 1432944 - 1432591 - | hypothetical protein SAG1421 1433672 - 1432941 - | glycosyl transferase, group 2 family protein SAG1422 1434615 - 1433674 - | glycosyl transferase, group 2 family protein SAG1423 1435759 - 1434605 - | glycosyl transferase, putative TERM 1875 1435863 - 1435826 - R 74 -5.8 -4.69027 | gap 1 AAAGTTAGCTAAAAA GAGCAGTAAG-CTAAAA GGATT CTCTAGCCTTACTACTC TTTGTTTTGATCTTA rfbD 1436730 - 1435876 - | dTDP-4-dehydrorhamnose reductase SAG1425 1437161 - 1436820 - | hypothetical protein TERM 1876 1437055 - 1437041 - G 71 -7.2 -3.9279 | AGCGAATCTCATAAA TTAACC CAA GGTTAA CAATATCTATTCCCA rpoD 1438379 - 1437270 - | RNA polymerase sigma factor RpoD TERM 1877 1438174 - 1438187 + g 70 -6.7 -4.17417 | ACCACATACTTTGTT GAAGG ATTG CCTTC TTTATCTGTGATTGA dnaG 1440195 - 1438387 - | DNA primase TERM 1878 1440210 - 1440220 + H 86 -4 -5.8901 | TTATAGTTTTACATT TGAT TAT ATCA TTTTTTCTTTTCTGT mscL 1440385 - 1440762 + | large conductance mechanosensitive channel protein TERM 1879 1440794 - 1440760 - T 74 -6.7 -4.16016 | gap 1, opp_overlap 1440770 1440793, overlap 1440763 1440768 1440770 TTACTCGCTAACAAA TAATAAAAGA-CTCGG ATTA CCGAGTTTTTTTATTA ACTTATAGTTATAAT TERM 1880 1440785 - 1440768 - T 76 -5.5 -5.08731 | opp_overlap 1440770, overlap 1440763 1440760 1440770 TAACAAATAATAAAA GACTCGG ATTA CCGAGTT TTTTTATTAACTTAT TERM 1881 1440770 - 1440783 + T 100 -8.1 -5.83226 | opp_overlap 1440768 1440763 1440760 1440770 ACAAATAATAAAAGA CTCGG ATTA CCGAG TTTTTTTATTAACTT TERM 1882 1440783 - 1440770 - T 79 -8.1 -4.12859 | opp_overlap 1440770, overlap 1440768 1440763 1440760 ACAAATAATAAAAGA CTCGG ATTA CCGAG TTTTTTTATTAACTT TERM 1883 1440850 - 1440809 - T 100 -14.1 -3.40071 | opp_overlap 1440811 1440821, overlap 1440811 1440821 AACTTATAGTTATAA TATATGAAAAAACAGCTCA ATTC TGAACTGTTTTTTCATATT CTATCTAATTAGAAT TERM 1884 1440811 - 1440848 + T 100 -14.5 -3.646 | opp_overlap 1440809 1440811 1440821, overlap 1440821 CTTATAGTTATAATA TATGAAAAAACAGCTCA ATTC TGAACTGTTTTTTCATA TTCTATCTAATTAGA TERM 1885 1440848 - 1440811 - T 100 -16.7 -3.26722 | opp_overlap 1440811 1440821, overlap 1440809 1440821 CTTATAGTTATAATA TATGAAAAAACAGCTCA ATTC TGAACTGTTTTTTCATA TTCTATCTAATTAGA TERM 1886 1440821 - 1440838 + T 74 -4.1 -5.30189 | opp_overlap 1440811 1440809 1440821, overlap 1440811 TAATATATGAAAAAA CAGCTCA ATTC TGAACTG TTTTTTCATATTCTA TERM 1887 1440838 - 1440821 - T 84 -6.3 -5.27399 | opp_overlap 1440821 1440811, overlap 1440811 1440809 TAATATATGAAAAAA CAGCTCA ATTC TGAACTG TTTTTTCATATTCTA rpsU 1441035 - 1440859 - | 30S ribosomal protein S21 SAG1430 1441642 - 1441139 - | hypothetical protein TERM 1888 1441715 - 1441702 - R 88 -6.7 -5.17054 | opp_overlap 1441702 1441696 ATAACATCCAAAAAA GCCTA TGAC TAGGC TTTTTAATATTATTC TERM 1889 1441702 - 1441715 + r 83 -6.7 -4.93316 | opp_overlap 1441702, overlap 1441696 ATAACATCCAAAAAA GCCTA TGAC TAGGC TTTTTAATATTATTC SAG1431 1442531 - 1441725 - | amino acid ABC transporter, amino acid-binding protein TERM 1890 1441995 - 1442028 + g 88 -7.5 -4.72386 | gap 1 TAACTCACTAATCGC TTCTCCCATCGCTGTC AGT GACA-CGACGTGAGAA TTTTTGAATGATTTC TERM 1891 1442817 - 1442858 + r 100 -20.7 -4.38712 | opp_overlap 1442817 1442820 1442824, overlap 1442824 CTCTCCTTGCTAAAA TAATAAATAAGGTTGAGAT GTAC ATCTCAACCTTATTTATTA TTTTCTAAAAATCGC TERM 1892 1442858 - 1442817 - R 100 -20.7 -4.07568 | opp_overlap 1442817 1442824, overlap 1442820 1442824 CTCTCCTTGCTAAAA TAATAAATAAGGTTGAGAT GTAC ATCTCAACCTTATTTATTA TTTTCTAAAAATCGC TERM 1893 1442855 - 1442820 - R 100 -18 -4.17048 | opp_overlap 1442817 1442824, overlap 1442817 1442824 TCCTTGCTAAAATAA TAAATAAGGTTGAGAT GTAC ATCTCAACCTTATTTA TTATTTTCTAAAAAT TERM 1894 1442851 - 1442824 - R 100 -14.4 -4.67697 | opp_overlap 1442817 1442824, overlap 1442820 1442817 TGCTAAAATAATAAA TAAGGTTGAGAT GTAC ATCTCAACCTTA TTTATTATTTTCTAA TERM 1895 1442824 - 1442851 + r 100 -14.4 -4.72617 | opp_overlap 1442824 1442820 1442817, overlap 1442817 TGCTAAAATAATAAA TAAGGTTGAGAT GTAC ATCTCAACCTTA TTTATTATTTTCTAA SAG1432 1443899 - 1442856 - | ammonium transporter family protein SAG1433 1443979 - 1445106 + | hypothetical protein TERM 1896 1445132 - 1445111 - T 100 -10.2 -5.03314 | opp_overlap 1445111 GTGATTGCTAAAAAA TCGCTAGC TTTATT GCTAGCGA TTTTTTAATATTAAA TERM 1897 1445111 - 1445132 + T 100 -10.2 -5.27779 | opp_overlap 1445111 GTGATTGCTAAAAAA TCGCTAGC TTTATT GCTAGCGA TTTTTTAATATTAAA SAG1434 1446129 - 1445143 - | hypothetical protein SAG1435 1446292 - 1446597 + | hypothetical protein TERM 1898 1446701 - 1446684 - T 91 -5.5 -5.80951 | opp_overlap 1446684 ATCTAAAACAAAAAA GGTCTCT TTCA AGAGGCC TTTTTTCATAACTTA TERM 1899 1446684 - 1446701 + T 91 -7.7 -5.18357 | opp_overlap 1446684 ATCTAAAACAAAAAA GGTCTCT TTCA AGAGGCC TTTTTTCATAACTTA SAG1436 1448128 - 1446755 - | glycerol-3-phosphate transporter, putative TERM 1900 1448383 - 1448357 - g 78 -5.9 -4.77757 | TTTCAAAAATTAAAA CACCCTATAAC CAAGT ATCACAGGGTG CATATTTTTATATTA SAG1437 1448236 - 1448403 + | hypothetical protein TERM 1901 1448530 - 1448512 - T 100 -10.4 -5.60689 | opp_overlap 1448512 TTAGACAAGAAAAAA GTAAGGTT GAA AACCTTAC TTTTAGAGACTTTTT TERM 1902 1448512 - 1448530 + T 91 -10.4 -4.14615 | opp_overlap 1448512 TTAGACAAGAAAAAA GTAAGGTT GAA AACCTTAC TTTTAGAGACTTTTT glgP 1450808 - 1448544 - | glycogen phosphorylase malQ 1452316 - 1450820 - | 4-alpha-glucanotransferase TERM 1903 1452397 - 1452423 + r 74 -7.4 -4.09822 | opp_overlap 1452399 1452413, overlap 1452399 1452413 AGCATAATTTAAAAA AACTTCTATCGA AAA TTGATAGAAGTC TTTATATCATAGCTT TERM 1904 1452399 - 1452421 + r 86 -10 -3.6393 | opp_overlap 1452399 1452413, overlap 1452397 1452413 CATAATTTAAAAAAA CTTCTATCGA AAA TTGATAGAAG TCTTTATATCATAGC TERM 1905 1452421 - 1452399 - R 100 -7.8 -5.55698 | opp_overlap 1452399 1452397 1452413, overlap 1452413 CATAATTTAAAAAAA CTTCTATCGA AAA TTGATAGAAG TCTTTATATCATAGC SAG1440 1453465 - 1452437 - | maltose operon repressor MalR, putative SAG1441 1453721 - 1454968 + | maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein SAG1442 1455066 - 1456436 + | maltose ABC transporter, permease protein SAG1443 1456436 - 1457272 + | maltose ABC transporter, permease protein TERM 1906 1457332 - 1457357 + F 100 -10.5 -4.85599 | opp_overlap 1457332 TTCTTTTCTAAAAAA GGCTTGGGTTC TATT GAATTCAAGCC TTTTTCTAAGCTAGA TERM 1907 1457357 - 1457332 - f 82 -6.1 -5.00616 | opp_overlap 1457332 TTCTTTTCTAAAAAA GGCTTGGGTTC TATT GAATTCAAGCC TTTTTCTAAGCTAGA TERM 1908 1457397 - 1457384 - f 88 -6.7 -5.14477 | TAGATAGTTAAAAAA CTTGG TTTA CCAAG GGTGTTAACCTCTAC SAG1444 1457503 - 1458975 + | proton/peptide symporter family protein TERM 1909 1458989 - 1459011 + T 100 -7.8 -5.68438 | opp_overlap 1458989 AAAGACATCTAAAAA GAACTAGG TTACATT CCTAGTTC TTTTTTGTTTAATAA TERM 1910 1459011 - 1458989 - T 87 -7.8 -4.75356 | opp_overlap 1458989 AAAGACATCTAAAAA GAACTAGG TTACATT CCTAGTTC TTTTTTGTTTAATAA TERM 1911 1459080 - 1459068 - T 74 -6.3 -4.46212 | opp_overlap 1459068 TCGCTTACTATAAAA CATCT CTG AGATG TCATCTTCGTCAAAT SAG1446 1459745 - 1459557 - | hypothetical protein SAG1447 1461081 - 1459756 - | hypothetical protein SAG1448 1462582 - 1461074 - | glycosyl transferase, group 1 family protein SAG1449 1464983 - 1462596 - | preprotein translocase subunit SecA TERM 1912 1462901 - 1462917 + g 74 -3.8 -5.09521 | GAAGAATCTCATCGG CTATTT TGAAT AAATAG TTTTTAATTTCTTCA TERM 1913 1463251 - 1463264 + g 78 -5.3 -4.91712 | TGAAATCTTCTCTGA CCTAA GGCT TTAGG TTTTTCTGGATTAAC SAG1450 1465962 - 1464970 - | hypothetical protein TERM 1914 1465915 - 1465891 - G 76 -5.9 -4.57569 | opp_overlap 1465897 TGATTTTCCTAAAAA TTGTAATTTTG TTC CAAAATTATAA GAAAACCTTGAAAAA SAG1451 1467443 - 1465959 - | hypothetical protein SAG1452 1469069 - 1467525 - | hypothetical protein TERM 1915 1468994 - 1468981 - G 81 -8.1 -4.32436 | ATAGTATCATCAAAA CCGAC ATTA GTCGG CTTGAAATACCACAA secY 1470298 - 1469069 - | preprotein translocase subunit SecY SAG1454 1471618 - 1470422 - | hypothetical protein SAG1455 1472566 - 1471679 - | glycosyl transferase, group 2 family protein SAG1457 1474036 - 1473647 - | IS1381 transposase protein B SAG1458 1474452 - 1474069 - | IS1381 transposase protein A SAG1459 1475822 - 1474581 - | glycosyl transferase family protein TERM 1916 1475733 - 1475722 - G 70 -3 -5.10064 | opp_overlap 1475722 TTTAAGATATAAAAA TCAA TAAA TTGA TTATGAAAGCATATT SAG1460 1477024 - 1475819 - | glycosyl transferase family protein SAG1461 1478040 - 1477033 - | hypothetical protein TERM 1917 1478296 - 1478329 + r 95 -10.6 -4.18058 | gap 1, opp_overlap 1478296 CTTCTACAACAAAAA GGCATATCTCTCTAA AAATA TTA-AGAGATATGCC TTTTACCATGTCATT TERM 1918 1478329 - 1478296 - R 100 -10.6 -5.18726 | gap 1, opp_overlap 1478296 CTTCTACAACAAAAA GGCATATCTCTCTAA AAATA TTA-AGAGATATGCC TTTTACCATGTCATT SAG1462 1481283 - 1478371 - | cell wall surface anchor family protein TERM 1919 1481702 - 1481692 - R 75 -2.6 -5.60993 | opp_overlap 1481672, overlap 1481672 TTTTTTAGAAAAAAA TATT CTT AATA AAGTTAAATTACTTA TERM 1920 1482603 - 1482617 + r 76 -7.2 -4.26881 | CCTACTACGATGAGC TAGTGA AAG TCACTA TTTACTTTTCTCGAA TERM 1921 1483195 - 1483244 + r 100 -16.9 -3.73144 | opp_overlap 1483195 1483199 1483204, overlap 1483204 TTTTGATTTCAATTA TTAATAAAACGACTAGAGCACTT CATT AACTACTCTAGTCGTTTTATTAA TTCTGTTCATCGTAT TERM 1922 1483244 - 1483195 - R 100 -19.1 -2.73364 | opp_overlap 1483195 1483204, overlap 1483199 1483204 TTTTGATTTCAATTA TTAATAAAACGACTAGAGCACTT CATT AACTACTCTAGTCGTTTTATTAA TTCTGTTCATCGTAT TERM 1923 1483240 - 1483199 - R 100 -15.5 -3.27774 | opp_overlap 1483195 1483204, overlap 1483195 1483204 GATTTCAATTATTAA TAAAACGACTAGAGCACTT CATT AACTACTCTAGTCGTTTTA TTAATTCTGTTCATC TERM 1924 1483235 - 1483204 - R 100 -11 -4.75219 | opp_overlap 1483195 1483204, overlap 1483199 1483195 CAATTATTAATAAAA CGACTAGAGCACTT CATT AACTACTCTAGTCG TTTTATTAATTCTGT TERM 1925 1483204 - 1483235 + r 93 -8.8 -4.82756 | opp_overlap 1483204 1483199 1483195, overlap 1483195 CAATTATTAATAAAA CGACTAGAGCACTT CATT AACTACTCTAGTCG TTTTATTAATTCTGT uvrB 1485250 - 1483259 - | excinuclease ABC subunit B TERM 1926 1484253 - 1484241 - G 89 -6.3 -5.33848 | overlap 1484243 ATCATAATCAAAAAA TCTTC TGG GAAGA AATCTAACAAAGTAA TERM 1927 1484281 - 1484271 - G 78 -6.8 -4.67942 | opp_overlap 1484271 1484265 TCTAACAAAGTAAAA GGTG GCT CACC TTCACTTCTACCATC TERM 1928 1485322 - 1485289 - R 93 -6.9 -5.47431 | gap 1, opp_overlap 1485289 1485295, overlap 1485295 TTAACATAGAAAAAA GAAAAAGACTGAGCTG CAA CA-CTCAATCTGTTTC TTCAGTCTTAATTAG TERM 1929 1485316 - 1485295 - R 87 -4.5 -5.8096 | gap 1, opp_overlap 1485289 1485295, overlap 1485289 TAGAAAAAAGAAAAA GACTGAGCTG CAA CA-CTCAATC TGTTTCTTCAGTCTT SAG1465 1486231 - 1485311 - | protease, putative TERM 1930 1487334 - 1487321 - g 75 -5.3 -4.81082 | AATTAATCAAGAAAA TTGCT AAAC AGCAA GGTTTTAAACTTGAT glnP 1486414 - 1488597 + | glutamine ABC transporter, glutamine-binding protein/permease protein TERM 1931 1489024 - 1489008 - g 81 -9.5 -3.68265 | AAAGCTAATGCCAAA CCAGATA GTT TATCTGG AGGACAAAAACAACG SAG1467 1488597 - 1489337 + | glutamine ABC transporter, ATP-binding protein, GlnQ putative TERM 1932 1489345 - 1489361 + F 100 -6.6 -5.74122 | opp_overlap 1489345, overlap 1489338 ACGTTTAATAAAAAA GATGAC TTCGT GTCATC TTTTTTTATATCCTA TERM 1933 1489361 - 1489345 - f 93 -6.6 -5.45652 | opp_overlap 1489345 1489338 ACGTTTAATAAAAAA GATGAC TTCGT GTCATC TTTTTTTATATCCTA SAG1468 1489486 - 1489836 + | hypothetical protein TERM 1934 1489914 - 1489933 + T 100 -9.4 -5.50723 | opp_overlap 1489914 CAAAATAACTAAAAA GGATAGTT ACTT AACTATCC TTTTTCTTTTGCTAA TERM 1935 1489933 - 1489914 - T 100 -9.4 -5.07971 | opp_overlap 1489914 CAAAATAACTAAAAA GGATAGTT ACTT AACTATCC TTTTTCTTTTGCTAA SAG1469 1490086 - 1489928 - | hypothetical protein obgE 1491419 - 1490112 - | GTPase ObgE TERM 1936 1491478 - 1491467 - R 90 -5.8 -5.67063 | opp_overlap 1491467 TTCAGTATAAAAAAA CGCT TTAC AGCG TTTCTCATTACATGA SAG1471 1491614 - 1491486 - | hypothetical protein TERM 1937 1492945 - 1492958 + G 73 -5.3 -4.58213 | GGTTTAAATCGTTCT TCAAC ACAT GTTGA TTTTATGATTGGTTC pepS 1491811 - 1493052 + | aminopeptidase PepS TERM 1938 1493041 - 1493099 + T 91 -7.99999 -4.95547 | gap 2, opp_overlap 1493054 1493062, overlap 1493045 1493054 1493062 TTTAGAAATGGCGAA TG-GGCTAT-TTAAATATAAAAAGGAGG TTAGT CCTCCTTTTTATATTTAATAAAGTTTCA TTTTCTTATTGTAAA TERM 1939 1493045 - 1493094 + T 100 -13.4 -4.36716 | gap 1, opp_overlap 1493054 1493062, overlap 1493041 1493054 1493062 GAAATGGCGAATGGG CTAT-TTAAATATAAAAAGGAGG TTAGT CCTCCTTTTTATATTTAATAAAG TTTCATTTTCTTATT TERM 1940 1493084 - 1493054 - T 100 -14.3 -3.65199 | opp_overlap 1493045 1493041 1493054 1493062, overlap 1493062 AATGGGCTATTTAAA TATAAAAAGGAGG TTAGT CCTCCTTTTTATA TTTAATAAAGTTTCA TERM 1941 1493054 - 1493084 + T 100 -14.3 -3.7795 | opp_overlap 1493054 1493062, overlap 1493045 1493041 1493062 AATGGGCTATTTAAA TATAAAAAGGAGG TTAGT CCTCCTTTTTATA TTTAATAAAGTTTCA TERM 1942 1493076 - 1493062 - T 91 -7.1 -5.20783 | opp_overlap 1493054 1493045 1493041 1493062, overlap 1493054 ATTTAAATATAAAAA GGAGG TTAGT CCTCC TTTTTATATTTAATA TERM 1943 1493062 - 1493076 + T 91 -7.1 -5.22289 | opp_overlap 1493062 1493054, overlap 1493054 1493045 1493041 ATTTAAATATAAAAA GGAGG TTAGT CCTCC TTTTTATATTTAATA SAG1473 1493664 - 1493086 - | cell wall surface anchor family protein SAG1474 1495816 - 1493774 - | amidase family protein rsuA 1496623 - 1495901 - | ribosomal small subunit pseudouridine synthase A TERM 1944 1496781 - 1496810 + r 82 -9.5 -3.65046 | opp_overlap 1496786, overlap 1496786 GAACTATCCCACATA AAAAAGATGGAAA TACA TTTCCATCTTTTC TTATTAAAATGAGAC TERM 1945 1496805 - 1496786 - R 100 -9.4 -5.37043 | opp_overlap 1496781 1496786 ATCCCACATAAAAAA GATGGAAA TACA TTTCCATC TTTTCTTATTAAAAT TERM 1946 1496786 - 1496805 + r 100 -9.4 -4.90079 | opp_overlap 1496786, overlap 1496781 ATCCCACATAAAAAA GATGGAAA TACA TTTCCATC TTTTCTTATTAAAAT SAG1476 1497656 - 1496814 - | aldo/keto reductase family oxidoreductase SAG1477 1497923 - 1498597 + | nitroreductase family protein gloA 1498685 - 1499077 + | lactoylglutathione lyase TERM 1947 1499102 - 1499124 + F 70 -4.2 -4.98857 | gap 1, opp_overlap 1499102 ATCATATTAAGTTAA GGACTGAGG CAAAAA CCT-AGTCC TTTTTATGATTACCT SAG1479 1499206 - 1500132 + | glycosyl transferase, group 2 family protein TERM 1948 1500140 - 1500164 + F 91 -9.4 -4.46212 | opp_overlap 1500135 1500140 AGGGATGAATTGAAA TCTCTTAGCT CACTT AGCTAGGAGA TTTTATCATAGAAAA TERM 1949 1500164 - 1500140 - f 72 -7.2 -3.78597 | opp_overlap 1500140, overlap 1500135 AGGGATGAATTGAAA TCTCTTAGCT CACTT AGCTAGGAGA TTTTATCATAGAAAA TERM 1950 1500227 - 1500217 - f 72 -2.6 -5.41746 | AATTTTGCAAAAAAA TTAT ATA ATAA AGGAGTTTTTCAAAA SAG1480 1500261 - 1501649 + | amino acid permease TERM 1951 1501663 - 1501686 + T 100 -10.4 -5.14563 | opp_overlap 1501660 1501668 AAGTCTATATTATTA GTGAAGTTGG TCAA TCAACTTCAC TTTTTTCGTCCAAAA TERM 1952 1501723 - 1501704 - T 100 -12.2 -5.00616 | opp_overlap 1501704 TTTTCGTCCAAAAAA GGTTAGGC AATT GCCTAACC TTTTGATAATCATCG TERM 1953 1501704 - 1501723 + T 100 -12.2 -4.32034 | opp_overlap 1501704 TTTTCGTCCAAAAAA GGTTAGGC AATT GCCTAACC TTTTGATAATCATCG smpB 1502200 - 1501733 - | SsrA-binding protein vacB 1504608 - 1502203 - | VacB/Rnb family exoribonuclease TERM 1954 1502246 - 1502259 + g 88 -5.3 -5.62552 | overlap 1502254 CCTTTCTTAGCAACG CCTTT ATAG AAAGG TTTTTTCGTTTTTTT TERM 1955 1504673 - 1504700 + r 93 -11.3 -3.73008 | opp_overlap 1504673, overlap 1504665 TTCTACTAACAAAAA GTGAGGTTGGG CTATCC CCCATCCTCAC TTATCTGTATTTAGC TERM 1956 1504700 - 1504673 - R 100 -11.3 -5.1356 | opp_overlap 1504673 1504665 TTCTACTAACAAAAA GTGAGGTTGGG CTATCC CCCATCCTCAC TTATCTGTATTTAGC secG 1504957 - 1504721 - | preprotein translocase subunit SecG rpmG 1505150 - 1505004 - | 50S ribosomal protein L33 SAG1485 1506316 - 1505147 - | multi-drug resistance protein TERM 1957 1506313 - 1506281 - G 91 -9.2 -4.37734 | CATAACAAGTGAAAA GCTTGCCCCAGTAA AAAAA TTACCGAGCCAAGC CACTTTTAAATTTTG SAG1486 1508158 - 1506512 - | hypothetical protein SAG1487 1508849 - 1508148 - | ABC transporter, ATP binding protein TERM 1958 1508962 - 1508944 - R 93 -6.1 -5.61913 | opp_overlap 1508944 AATAAAGACAAAAAA TGGATAA ATACA TTATCCA TTTAGTAGTTCTATA coaE 1509560 - 1508973 - | dephospho-CoA kinase mutM 1510378 - 1509557 - | formamidopyrimidine-DNA glycosylase TERM 1959 1510208 - 1510198 - G 81 -5.4 -5.1166 | CACCAAAATCAAAAA GAAG ATA CTTC CCTCGTCTCAATACC SAG1490 1511375 - 1510527 - | MutR family transcriptional regulator TERM 1960 1511049 - 1511039 - G 74 -4 -5.17576 | GATCAATTGAAAAAA TAAG AGC CTTA ATCATAATCTTTTCA TERM 1961 1511264 - 1511278 + g 71 -7.2 -3.98083 | TTTCTGACTCTCCTC TCTCAA ACC TTGAGA TTTGTGACTTGGATA TERM 1962 1512550 - 1512530 - g 88 -5.3 -5.63374 | overlap 1512521 CGAATACCAAAAAAA TCTCGGAAG CAT CATCCGGGA AATTGGAGATACACT SAG1491 1511592 - 1513184 + | hypothetical protein SAG1492 1513220 - 1513396 + | hypothetical protein TERM 1963 1513416 - 1513443 + T 100 -12.8 -5.27335 | opp_overlap 1513416 CTCCTAAAATAAAAA GGAACACTGCCA TTTT TGACAGTGTTCC TTTTTATTTAACCAA TERM 1964 1513443 - 1513416 - T 100 -15 -5.45802 | opp_overlap 1513416 CTCCTAAAATAAAAA GGAACACTGCCA TTTT TGACAGTGTTCC TTTTTATTTAACCAA SAG1493 1513647 - 1513447 - | hypothetical protein SAG1494 1513938 - 1513840 - | hypothetical protein TERM 1965 1514044 - 1514010 - R 84 -5.2 -5.4833 | opp_overlap 1514010 1514011 1514033, overlap 1514011 1514033 TTATCTAACAAAAAA CTCGTAATTCTATATA AAT CATATAAAGTTACGAA CTTTATTTAGTTAAC TERM 1966 1514123 - 1514100 - R 71 -6.8 -4.11105 | opp_overlap 1514105, overlap 1514105 TAAAAAAACGAATAA CAAAAGAGCC AAAA AGCTCTTTTA AACTGACAAAAATGT TERM 1967 1514118 - 1514105 - R 73 -4.5 -4.96523 | opp_overlap 1514105, overlap 1514100 AAACGAATAACAAAA GAGCC AAAA AGCTC TTTTAAACTGACAAA SAG1495 1514418 - 1514173 - | CAAX amino terminal protease family protein SAG1496 1514778 - 1514446 - | hypothetical protein TERM 1968 1514599 - 1514589 - G 73 -3.2 -5.13722 | CCCAGCAAAATAAAA CGCT AAA AGCA CCTATTGCAAATAGC TERM 1969 1514651 - 1514663 + g 70 -3.4 -5.06816 | GACTCTTGGTAGTTA CTGA TTGGC TCAG TTTTTGTTAGCACAT SAG1497 1514993 - 1514880 - | hypothetical protein SAG1498 1515558 - 1515157 - | hypothetical protein era 1516694 - 1515795 - | GTP-binding protein Era dgkA 1517134 - 1516736 - | diacylglycerol kinase SAG1501 1517600 - 1517115 - | putative metalloprotease TERM 1970 1517533 - 1517559 + g 80 -6.7 -4.88711 | CCTGTTTTTTGTGCT GCAAACTCT AACAAATCA AGAGTTTGC TTTTTGATATCTTCT SAG1502 1518813 - 1518007 - | tetracenomycin polyketide synthesis O-methyltransferase TcmP, putative SAG1503 1518977 - 1518858 - | hypothetical protein SAG1504 1519130 - 1519014 - | hypothetical protein SAG1505 1519611 - 1519135 - | MutT/nudix family protein SAG1506 1519803 - 1520606 + | hypothetical protein TERM 1971 1520647 - 1520630 - T 100 -9.9 -4.93898 | opp_overlap 1520630 ACACCATCATAAAAA CGCCTAA AGCA TTAGGCG TTTTTTACATATTGA TERM 1972 1520630 - 1520647 + T 100 -9.9 -5.1615 | opp_overlap 1520630 ACACCATCATAAAAA CGCCTAA AGCA TTAGGCG TTTTTTACATATTGA SAG1507 1521734 - 1520697 - | PhoH family protein TERM 1973 1521767 - 1521799 + r 90 -9.4 -4.3208 | opp_overlap 1521772, overlap 1521772 GTCGTTGTAAAACTA AAAAATCGAGAAAA ACAAG TTTTCTCGATTTTA TTTTACATTATAAAA TERM 1974 1521794 - 1521772 - R 100 -9.3 -5.46698 | opp_overlap 1521772 1521767 TGTAAAACTAAAAAA TCGAGAAAA ACAAG TTTTCTCGA TTTTATTTTACATTA TERM 1975 1521772 - 1521794 + r 95 -9.3 -5.13343 | opp_overlap 1521772, overlap 1521767 TGTAAAACTAAAAAA TCGAGAAAA ACAAG TTTTCTCGA TTTTATTTTACATTA SAG1508 1523579 - 1521807 - | 67 kDa Myosin-crossreactive streptococcal antigen TERM 1976 1523725 - 1523706 - R 84 -6.5 -5.1925 | opp_overlap 1523699 1523706 CTATAACCTAAAAAA GAGATTG AAAATA CAATCTC TATATTATTGTTAAT SAG1509 1523951 - 1523736 - | hypothetical protein msrA 1524457 - 1523948 - | methionine sulfoxide reductase A SAG1511 1525449 - 1524595 - | hypothetical protein TERM 1977 1525513 - 1525467 - R 93 -9.7 -4.56597 | gap 1, opp_overlap 1525481 1525496 TTCTCCTTTTAAAAA GGTAACCGACA-AACCAAATCC ATCT GGTTTTGATTCTATCAGTTACC TCCATAATCATTTTA frr 1526124 - 1525567 - | ribosome recycling factor TERM 1978 1526082 - 1526100 + g 73 -6 -4.41241 | AACTTTGGTGTGATT GCTCAAAA CGC TCTTGAGC TTTTGTAACGATTTC pyrH 1526868 - 1526140 - | uridylate kinase TERM 1979 1526418 - 1526438 + g 84 -11.1 -3.551 | CTTCTGCCTCAATCT CAGCAGCAC GAA GCGCTGCTG TTGTATCAGTTGAGA SAG1514 1527669 - 1526989 - | peptide ABC transporter, ATP-binding protein SAG1515 1528444 - 1527656 - | peptide ABC transporter, ATP-binding protein TERM 1980 1527697 - 1527709 + g 74 -7.7 -3.89971 | CTTCATACTCCATTT GCACT GTC AGTGC TTTCGTATAGTTATG SAG1516 1529199 - 1528432 - | peptide ABC transporter, permease protein TERM 1981 1529124 - 1529108 - G 70 -8.1 -3.41962 | opp_overlap 1529108, overlap 1529106 CCTAACAAATGAACA TTATTGG GAG CCAATAA TTTTTGTGATAAATC TERM 1982 1529108 - 1529124 + g 95 -8.1 -4.9218 | opp_overlap 1529108 1529106 CCTAACAAATGAACA TTATTGG GAG CCAATAA TTTTTGTGATAAATC SAG1517 1530182 - 1529238 - | peptide ABC transporter, permease protein SAG1518 1531785 - 1530169 - | peptide ABC transporter, peptide-binding protein TERM 1983 1531537 - 1531557 + g 78 -9.8 -3.37939 | opp_overlap 1531533, overlap 1531532 ATCTTGACTAATGCT CCAGCTTT TCGCT AAAGCTGG TTCAATTTTCCCATT TERM 1984 1532132 - 1532107 - R 88 -9.3 -4.30576 | opp_overlap 1532113 CTTTGATTATTAAAA TATATACTTAA CTAG TTAAGTATATA GAATAAATAAAACTA TERM 1985 1532167 - 1532140 - R 88 -8.6 -4.43576 | opp_overlap 1532145, overlap 1532145 AGTATATAGAATAAA TAAAACTAGGAA GGAA TTCCTAGTTTTT TATTGATTAAAGTGA TERM 1986 1532162 - 1532145 - R 95 -8.5 -5.16038 | opp_overlap 1532145, overlap 1532140 ATAGAATAAATAAAA CTAGGAA GGAA TTCCTAG TTTTTTATTGATTAA TERM 1987 1532145 - 1532162 + r 100 -8.5 -5.5604 | opp_overlap 1532140 1532145 ATAGAATAAATAAAA CTAGGAA GGAA TTCCTAG TTTTTTATTGATTAA rplA 1532863 - 1532174 - | 50S ribosomal protein L1 TERM 1988 1532203 - 1532217 + g 75 -8.6 -3.51032 | opp_overlap 1532183 GATCAACTTTGATAC CAACAC CTT GTGTTG TTGTAATTGAAAGGT TERM 1989 1532839 - 1532850 + g 77 -3 -5.4477 | TCTCAAGAGCAGCAC GTAA GTTT TTAC TTTTTTTAGCCATTT rplK 1533392 - 1532967 - | 50S ribosomal protein L11 TERM 1990 1533061 - 1533104 + g 73 -6.8 -4.3295 | AAATCTGGCATTTTA GTTTCAGCAATTTCTTGTAC TTGC GCACGAGTAATTGTTGCAAC TTTAGTTTTGTTAGG TERM 1991 1533137 - 1533178 + g 73 -6.5 -4.30844 | overlap 1533140 CACCTGATCCTTTTT CAACACCTGCAGCTTTTTT CAAA AGAACAGCAGCTGGTGGTG TTTTAGTGATGAAAT SAG1521 1533654 - 1534820 + | IS30 family transposase TERM 1992 1534900 - 1534884 - T 71 -8.1 -3.1875 | opp_overlap 1534879 1534878, overlap 1534849 CATAGCGGAACTTAA TCTGAAA CGC TTTCAGA TGAGGATGTTTTCTT TERM 1993 1534974 - 1535008 + T 95 -8.6 -5.30199 | opp_overlap 1534974 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 1994 1535008 - 1534974 - T 70 -4.2 -4.94902 | opp_overlap 1534974 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 1995 1535116 - 1535152 + T 100 -15.5 -4.59342 | opp_overlap 1535119 1535122, overlap 1535119 CCTTTTACATTATTA CAACAATACTTGAGATT TTG AATCTCAAGTATTGTTA TTTATTTATCCTCAA TERM 1996 1535149 - 1535119 - T 100 -17.2 -3.45849 | opp_overlap 1535116 1535119, overlap 1535122 TTTACATTATTACAA CAATACTTGAGATT TTG AATCTCAAGTATTG TTATTTATTTATCCT TERM 1997 1535119 - 1535149 + T 100 -17.2 -4.39652 | opp_overlap 1535119 1535122, overlap 1535116 TTTACATTATTACAA CAATACTTGAGATT TTG AATCTCAAGTATTG TTATTTATTTATCCT TERM 1998 1535146 - 1535122 - T 100 -13.1 -3.86266 | opp_overlap 1535119 1535116, overlap 1535119 ACATTATTACAACAA TACTTGAGATT TTG AATCTCAAGTA TTGTTATTTATTTAT SAG1522 1536536 - 1535154 - | major facilitator transporter TERM 1999 1535255 - 1535239 - G 72 -9.5 -2.66118 | overlap 1535235 TTTAAAATTAATCCA CACAAAG CTG CTTTGTG AAAATCTGCATTACC SAG1523 1537758 - 1536544 - | M20/M25/M40 family peptidase SAG1524 1538037 - 1538921 + | LysR family transcriptional regulator SAG1525 1538982 - 1539335 + | hypothetical protein TERM 2000 1539358 - 1539398 + F 100 -12.7 -4.47328 | opp_overlap 1539356 1539352 1539369 TGGATAAATTGAACT GCACCCCAAAAGTTAGA CAAAAAA TCTAACGATTGGGGTGC TTTTCTGATGAAATT SAG1526 1539406 - 1539942 + | IS861, transposase OrfA TERM 2001 1540742 - 1540710 - g 100 -12.2 -4.74084 | opp_overlap 1540710, overlap 1540699 AAAGCAAAACTAAAA GGACTTAGTCCTGT GCAAT ACAGAACTAAATCC TTCACTTAAAATAAA SAG1527 1539918 - 1540751 + | IS861, transposase OrfB SAG1528 1542515 - 1540800 - | chorismate binding enzyme TERM 2002 1541347 - 1541325 - G 76 -9.2 -3.37344 | opp_overlap 1541320 1541318 CGCTGATTCAACTAA TCTCTCGACA TGT TGTTGAGAGA AAAGAAGTTTATTTT TERM 2003 1542589 - 1542562 - R 100 -12.2 -5.5208 | opp_overlap 1542562 TTATAACATAAAAAA CTAATCCGACAA TTTC TTGTCAGATTAG TTTTTTCTTATTCAC TERM 2004 1542562 - 1542589 + r 100 -10 -5.64873 | opp_overlap 1542562 TTATAACATAAAAAA CTAATCCGACAA TTTC TTGTCAGATTAG TTTTTTCTTATTCAC SAG1529 1545047 - 1542597 - | FtsK/SpoIIIE family protein SAG1530 1545213 - 1546016 + | peptidyl-prolyl cis-trans isomerase, cyclophilin-type TERM 2005 1546029 - 1546054 + T 100 -13.5 -5.00884 | opp_overlap 1546029 TAATTCTATCAAAAA TGAGACTAGAA CATT TTCTAGTCTCA TTTTTTAACAACACT TERM 2006 1546054 - 1546029 - T 100 -13.5 -4.74801 | opp_overlap 1546029 TAATTCTATCAAAAA TGAGACTAGAA CATT TTCTAGTCTCA TTTTTTAACAACACT SAG1531 1546901 - 1546068 - | manganese ABC transporter, permease protein SAG1532 1547619 - 1546903 - | manganese ABC transporter, ATP-binding protein TERM 2007 1547636 - 1547669 + r 71 -8.4 -3.27382 | gap 2, opp_overlap 1547633 1547639, overlap 1547638 1547639 TTTCCTCCAAAAGTA GAA-TGGAG-CTGGTT ATAA AACCAGACTCCACTTC TCTGTATTTATTAAA TERM 2008 1547665 - 1547639 - R 87 -10.3 -3.68359 | gap 1, opp_overlap 1547638 1547636 1547639, overlap 1547633 CCTCCAAAAGTAGAA TGGAG-CTGGTT ATAA AACCAGACTCCA CTTCTCTGTATTTAT TERM 2009 1547639 - 1547665 + r 81 -10.3 -2.83685 | gap 1, opp_overlap 1547639 1547633, overlap 1547638 1547636 CCTCCAAAAGTAGAA TGGAG-CTGGTT ATAA AACCAGACTCCA CTTCTCTGTATTTAT SAG1533 1548716 - 1547790 - | manganese ABC transporter, manganese-binding adhesion liprotein TERM 2010 1548061 - 1548080 + g 70 -6.4 -4.11773 | ATTTCCCAGATGTAT GCTGATGG AACT CCATAAGC TTTTGAGAAATATTT TERM 2011 1548247 - 1548261 + g 70 -2.8 -5.09895 | opp_overlap 1548249, overlap 1548249 GGATCTTTAGCAATT AATTGC TTA GCAATA TTTTTTGAGTAAATA TERM 2012 1548371 - 1548384 + g 81 -5.3 -5.18297 | CTCCATCGCTAACCG CAAAG TAAT CTTTG TTTTCTTTCTTCTTA TERM 2013 1548479 - 1548467 - G 70 -3.4 -5.00616 | opp_overlap 1548467 1548455 TTCCGTTGTAAAAAA CAAG GTCTG CTTG AGTTGTTTTTTCAAC TERM 2014 1548800 - 1548814 + H 78 -5.8 -4.81752 | opp_overlap 1548800 1548812, overlap 1548812 ATAACCTATTATAAA GTATTT GTC AAATAC TTTTTCAGTATTTTT SAG1534 1548883 - 1549530 + | iron-dependent transcriptional regulator TERM 2015 1549526 - 1549577 + T 86 -11.3 -2.73124 | gap 1, opp_overlap 1549513 1549539 1549541, overlap 1549539 TATATGTATCTGCTA CATAAATAAAAAAGTCCGTGTATT CATTA GATACACGGGCTTTTTTATA-ATG CTTTCAAAAATGCCA TERM 2016 1549539 - 1549565 + T 100 -9.5 -5.33785 | opp_overlap 1549539 1549541, overlap 1549526 TACATAAATAAAAAA GTCCGTGTATT CATTA GATACACGGGC TTTTTTATAATGCTT TERM 2017 1549565 - 1549539 - T 100 -6.6 -5.76237 | opp_overlap 1549539 1549526, overlap 1549541 TACATAAATAAAAAA GTCCGTGTAT TCATTAG ATACACGGGC TTTTTTATAATGCTT pfs 1550259 - 1549570 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SAG1536 1550538 - 1550269 - | hypothetical protein SAG1537 1551092 - 1550538 - | MutT/nudix family protein TERM 2018 1550987 - 1551003 + g 78 -9.5 -3.56643 | overlap 1550985 AAACAAGTTCACGTT TGGATTG TCC CAATCCA TTTGGCAACTCTACA glmU 1552492 - 1551113 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 2019 1552400 - 1552387 - G 73 -6.7 -4.22652 | overlap 1552399 GCACACTACGGAAAA CATGC TCAA GCATG GTAATACCAGATACT TERM 2020 1552643 - 1552624 - H 100 -10.8 -4.75219 | opp_overlap 1552624 1552626 CAATTAGGAATAAAA TAGCTACC TTTT GGTAGCTA TTCAATACATGAAAT TERM 2021 1552624 - 1552643 + H 84 -10.8 -3.07935 | opp_overlap 1552624, overlap 1552626 CAATTAGGAATAAAA TAGCTACC TTTT GGTAGCTA TTCAATACATGAAAT TERM 2022 1552626 - 1552641 + H 74 -9 -3.09878 | opp_overlap 1552624, overlap 1552624 ATTAGGAATAAAATA GCTACC TTTT GGTAGC TATTCAATACATGAA SAG1539 1552634 - 1552729 + | hypothetical protein SAG1540 1553149 - 1552736 - | hypothetical protein SAG1541 1553539 - 1553162 - | glyoxalase family protein TERM 2023 1553607 - 1553622 + r 80 -7.6 -4.17274 | opp_overlap 1553607 AAAATAAGTAAAAAA TGACTC AAAA GAGTCA TTTACTTATTTCGTT TERM 2024 1553622 - 1553607 - R 100 -7.6 -5.43514 | opp_overlap 1553607 AAAATAAGTAAAAAA TGACTC AAAA GAGTCA TTTACTTATTTCGTT SAG1542 1554584 - 1553628 - | Gfo/Idh/MocA family oxidoreductase TERM 2025 1554933 - 1554945 + r 71 -7.7 -3.41527 | CTACAACTAACTTTG CCAGA AGA TCTGG TTCTGCTCCAAATTG fabG 1555969 - 1555271 - | 3-ketoacyl-(acyl-carrier-protein) reductase SAG1545 1556198 - 1555962 - | hypothetical protein SAG1546 1556536 - 1556288 - | hypothetical protein SAG1547 1557234 - 1556734 - | acetyltransferase TERM 2026 1557403 - 1557446 + r 100 -22.2 -4.64844 | opp_overlap 1557406 1557415 TAGGCCAATTATTGA TAATCACTAAAAGAGCGTAG ATAA TTACGCTCTTTTAGTGATTA TTTTATATATATGAA TERM 2027 1557443 - 1557406 - R 100 -18.8 -3.39595 | opp_overlap 1557403, overlap 1557415 GCCAATTATTGATAA TCACTAAAAGAGCGTA GATAAT TACGCTCTTTTAGTGA TTATTTTATATATAT TERM 2028 1557434 - 1557415 - R 82 -7.9 -4.37527 | opp_overlap 1557403, overlap 1557406 TGATAATCACTAAAA GAGCGTA GATAAT TACGCTC TTTTAGTGATTATTT SAG1548 1558742 - 1557474 - | glycosyl transferase, group 2 family protein TERM 2029 1558133 - 1558115 - G 72 -8.2 -3.62046 | CCACCGCTTTAACAA GGTCTTTC TTA AAAAGACC GAAAGCCCCCGAAAT SAG1549 1558750 - 1559133 + | IS1381 transposase protein A SAG1550 1559166 - 1559555 + | IS1381 transposase protein B SAG1551 1559747 - 1559544 - | hypothetical protein SAG1552 1562046 - 1559887 - | hypothetical protein SAG1553 1563486 - 1562053 - | hypothetical protein SAG1554 1564168 - 1563491 - | hypothetical protein TERM 2030 1563996 - 1563964 - G 77 -9.9 -3.24188 | opp_overlap 1563963 1563961, overlap 1563967 CTACATTATTACCAA TAACGGTCATTACTG TTG CAGTCAAGACCGTCA ATGTCATTAATGAAA TERM 2031 1563993 - 1563967 - G 81 -9.4 -3.75738 | opp_overlap 1563963 1563961, overlap 1563964 CATTATTACCAATAA CGGTCATTACTG TTG CAGTCAAGACCG TCAATGTCATTAATG SAG1555 1564915 - 1564220 - | hypothetical protein TERM 2032 1565021 - 1565031 + r 82 -2.6 -5.93809 | opp_overlap 1565021 GTCAACAGGAAAATA TATA ATG TATA TTTTTTTTATACGAA TERM 2033 1565249 - 1565229 - R 100 -9.1 -5.37043 | opp_overlap 1565229 ATCTGATATAAAAAA GGCTAAAAC TAA GTTTTAACC TTTTTGACATATCTA TERM 2034 1565229 - 1565249 + r 79 -6.9 -4.65838 | opp_overlap 1565229 ATCTGATATAAAAAA GGCTAAAAC TAA GTTTTAACC TTTTTGACATATCTA brnQ-1 1566618 - 1565281 - | branched-chain amino acid transport system II carrier protein TERM 2035 1566027 - 1566017 - G 70 -3.2 -5.00895 | overlap 1566022 GCTACTAGACAAAAA GCAA CTG CTGC AAGTGCATCAAGTGT TERM 2036 1566806 - 1566794 - R 100 -7.7 -6.09196 | opp_overlap 1566794 TTGAAAACAAAAAAA GAGCA TAA TGCTC TTTTCGATTAACCAA TERM 2037 1566794 - 1566806 + r 80 -7.7 -4.27316 | opp_overlap 1566794 TTGAAAACAAAAAAA GAGCA TAA TGCTC TTTTCGATTAACCAA metG 1568811 - 1566814 - | methionyl-tRNA synthetase TERM 2038 1568252 - 1568262 + g 70 -6.8 -4.10657 | AATTCTGGATGCTCA GCGT AGT ACGC TTTTAAACGATCTGC TERM 2039 1568828 - 1568844 + H 74 -3 -5.32882 | gap 1, opp_overlap 1568827 1568830 ATTTCTCCTATAAGC CACC-CT AATG AGAGGTG TTTTTTATCATGATA tehB 1568954 - 1569829 + | tellurite resistance protein TehB TERM 2040 1569825 - 1569858 + T 100 -12.7 -3.94002 | opp_overlap 1569827 1569832, overlap 1569827 1569832 CTCGAAAATTAAGAT CATAAAAGTGAGTAG AAAT CTACTCACTTTTATC TTTGGTTAGGTAATA TERM 2041 1569856 - 1569827 - T 100 -15.3 -2.85583 | opp_overlap 1569825 1569827 1569832, overlap 1569832 CGAAAATTAAGATCA TAAAAGTGAGTAG AAAT CTACTCACTTTTA TCTTTGGTTAGGTAA TERM 2042 1569827 - 1569856 + T 100 -15.3 -3.55604 | opp_overlap 1569827 1569832, overlap 1569825 1569832 CGAAAATTAAGATCA TAAAAGTGAGTAG AAAT CTACTCACTTTTA TCTTTGGTTAGGTAA TERM 2043 1569851 - 1569832 - T 100 -10.8 -4.55625 | opp_overlap 1569827 1569825 1569832, overlap 1569827 ATTAAGATCATAAAA GTGAGTAG AAAT CTACTCAC TTTTATCTTTGGTTA TERM 2044 1569832 - 1569851 + T 100 -10.8 -4.84539 | opp_overlap 1569832 1569827, overlap 1569827 1569825 ATTAAGATCATAAAA GTGAGTAG AAAT CTACTCAC TTTTATCTTTGGTTA SAG1559 1570682 - 1569987 - | hypothetical protein TERM 2045 1570638 - 1570618 - G 72 -4 -4.90525 | gap 1, overlap 1570620 1570622 TAACCTGAAATAAAA CAGA-GTGC AACC GCACACCTG AGCCCTTCATATATT SAG1560 1570819 - 1570697 - | hypothetical protein TERM 2046 1571807 - 1571797 - g 73 -5.4 -4.61231 | opp_overlap 1571797 1571795 1571787 TTATACTGTTAAAAA TAGC TTT GCTA TGTTTGGCGGTATTG SAG1561 1571018 - 1572235 + | PTS system, IIC component, putative TERM 2047 1572479 - 1572465 - g 72 -3.6 -5.055 | TTAACTGTCAAAAAA GACAAT AGC ATTATC TACAATGGACAAATT SAG1562 1572219 - 1573061 + | hypothetical protein TERM 2048 1573634 - 1573618 - g 78 -6.6 -4.70659 | TTGGATAGTCAAAAA CCTGTT CTAGC AACAGG TGACTATAACGTAGC exoA 1573138 - 1573965 + | exodeoxyribonuclease TERM 2049 1574001 - 1573976 - T 100 -13.5 -5.75822 | opp_overlap 1573976 TATAAACCAAAAAAA GATGATTGAGT TATA ACTCAATCATC TTTTTATACTAAGTT TERM 2050 1573976 - 1574001 + T 100 -13.5 -4.92783 | opp_overlap 1573976 TATAAACCAAAAAAA GATGATTGAGT TATA ACTCAATCATC TTTTTATACTAAGTT SAG1564 1574361 - 1574005 - | hypothetical protein TERM 2051 1574293 - 1574307 + g 84 -4.3 -5.52384 | TTCAAAAGTCAAGCC GAGTT CAGTT AACTC TTTTTTTGCTGAACG ogt 1574839 - 1574363 - | methylated-DNA--protein-cysteine S-methyltransferase TERM 2052 1574882 - 1574861 - R 74 -5.2 -4.78752 | opp_overlap 1574861 1574850 1574863, overlap 1574848 1574853 AGCATAACTTAAAAA GCCATGAA AAGCAA TTCATGAC TTTTTAGTTCTTTAT SAG1566 1576075 - 1574894 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein SAG1567 1576686 - 1576138 - | acetyltransferase TERM 2053 1577827 - 1577813 - H 81 -10 -3.01712 | CTGGTTTTGGTAAGA CTGCAG GAC CTGCAG AAAAATTATAAATTG SAG1569 1577979 - 1578614 + | copper homeostasis protein CutC, putative TERM 2054 1578693 - 1578662 - Tf 78 -9.6 -3.22774 | TATATTTACTACTAA GTTCTCTCATGTTT TCTA AAACCTGAAAGAAC CGGAATAAGAGCATA SAG1570 1578762 - 1578658 - | hypothetical protein TERM 2055 1578795 - 1578809 + Gr 76 -7.2 -4.18488 | ATTTTAAGGAAATTG GAAGTA TCT TACTTC TTTATTCCAATAGCT TERM 2056 1578836 - 1578876 + Gr 100 -12.3 -3.86312 | gap 1, opp_overlap 1578838 1578843, overlap 1578843 AGCTAAATCGGAGAT TATAAAA-GGTTGCCAAA TTTTTC TTTGGCAACCTTTTTATA TTATTACTTATAAAT TERM 2057 1578873 - 1578838 - gR 87 -12.1 -2.65766 | opp_overlap 1578836 1578843, overlap 1578843 CTAAATCGGAGATTA TAAAAGGTTGCCAAA TTTTTC TTTGGCAACCTTTTT ATATTATTACTTATA TERM 2058 1578843 - 1578868 + Gr 100 -12 -5.2015 | opp_overlap 1578838 1578843, overlap 1578836 TCGGAGATTATAAAA GGTTGCCAAA TTTTTC TTTGGCAACC TTTTTATATTATTAC TERM 2059 1578868 - 1578843 - gR 100 -12 -4.50976 | opp_overlap 1578843 1578836, overlap 1578838 TCGGAGATTATAAAA GGTTGCCAAA TTTTTC TTTGGCAACC TTTTTATATTATTAC SAG1571 1578747 - 1578908 + | hypothetical protein SAG1572 1579747 - 1578884 - | tetrapyrrole methylase family protein TERM 2060 1579261 - 1579281 + g 75 -6.9 -4.2204 | overlap 1579257 GTGTTTCAGGGTAAT CTTGCTTTG TTT CAAAGAAAG TTATTTGTTGACCTT SAG1573 1580079 - 1579753 - | DNA replication intiation control protein YabA TERM 2061 1579973 - 1579988 + g 73 -3.3 -5.0917 | AGAACAGTATTCTCC TCCAA TAATTT TTGGA TTTGTTTTTTCATAG SAG1574 1580972 - 1580109 - | DNA polymerase III subunit delta' TERM 2062 1580613 - 1580626 + g 78 -5.3 -5.04987 | CAAAAGACTGTTGGC TGCAT TGAC ATGCA TTTTTTCGCAATCTT TERM 2063 1580912 - 1580891 - G 82 -6.7 -5.01732 | gap 1 AATTTCCCGAAAAAA GATAGGCATG ACT CAT-CCTATC TGACTGTAAAATAGT tdk 1581627 - 1580992 - | thymidylate kinase TERM 2064 1581707 - 1581681 - R 100 -6.6 -5.54894 | opp_overlap 1581681 AATTTATCAAAAAAA GACACCCACAAC TTG ATTGTGCATGTC TGATATTTTTAAGAG TERM 2065 1583083 - 1583067 - R 71 -8.1 -3.1875 | opp_overlap 1583062 1583061, overlap 1583032 CATAGCGGAACTTAA TCTGAAA CGC TTTCAGA TGAGGATGTTTTCTT TERM 2066 1583157 - 1583191 + r 100 -10.8 -5.30199 | opp_overlap 1583157 CAAGTATTATAAAAA CCAACGAAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 2067 1583191 - 1583157 - R 95 -8.6 -4.94902 | opp_overlap 1583157 CAAGTATTATAAAAA CCAACGAAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT SAG1577 1583927 - 1583268 - | AcuB family protein livF 1584656 - 1583946 - | branched-chain amino acid ABC transporter, ATP-binding protein livG 1585420 - 1584656 - | branched-chain amino acid ABC transporter, ATP-binding protein SAG1580 1586374 - 1585421 - | branched-chain amino acid ABC transporter, permease protein livH 1587246 - 1586377 - | branched-chain amino acid ABC transporter, permease protein SAG1582 1588518 - 1587352 - | branched-chain amino acid ABC transporter, amino acid-binding protein TERM 2068 1587480 - 1587492 + g 73 -3.4 -5.22312 | opp_overlap 1587474, overlap 1587474 CTTTAAAATCTTTCA GCTT AGCTA AAGC TTTTTTAATATCAAT TERM 2069 1588105 - 1588141 + g 83 -8.7 -4.21408 | overlap 1588109 GACTAAATTGTCTTG TGTCGCAGCAGGTGCAA TCA TTGGAACTGCTGCTGCA TTTACTTTTGGAGTT TERM 2070 1588109 - 1588137 + g 77 -10.3 -2.75863 | overlap 1588105 AAATTGTCTTGTGTC GCAGCAGGTGCAA TCA TTGGAACTGCTGC TGCATTTACTTTTGG TERM 2071 1588647 - 1588627 - R 79 -2.6 -5.74086 | opp_overlap 1588627 AAACTAAATAAAAAA GAAGGA CATCTGAAC TCCTTC TTTCTAATAACTACT SAG1583 1588918 - 1588673 - | hypothetical protein TERM 2072 1588911 - 1588921 + g 74 -2.6 -5.42514 | overlap 1588898 CCTAAACGCTCTTGT TTAT TCA ATAA TTTTTTCCTTTCTGC TERM 2073 1589001 - 1588988 - R 95 -5.3 -6.08342 | CAACAAATAAAAAAA GAGTT GGTA AACTC AACCACGCCGTACGC SAG1584 1590225 - 1589092 - | IS1548 transposase clpP 1590934 - 1590344 - | ATP-dependent Clp protease proteolytic subunit TERM 2074 1591017 - 1591042 + r 74 -7.7 -3.77588 | gap 1, opp_overlap 1591017, overlap 1591003 1591012 ACTTTTTTAAGAAAA GGC-TTTCTGAG TTC TTCAGAAAAGCC TTATTCATCTCAAAT TERM 2075 1591042 - 1591017 - R 79 -7 -4.63486 | gap 1, opp_overlap 1591003 1591012 1591017 ACTTTTTTAAGAAAA GGC-TTTCTGA GTTCT TCAGAAAAGCC TTATTCATCTCAAAT upp 1591688 - 1591059 - | uracil phosphoribosyltransferase SAG1587 1592967 - 1591798 - | aminotransferase, class I TERM 2076 1593094 - 1593074 - R 83 -6.9 -4.79451 | opp_overlap 1593074 ATTCTAAAGATAAAA GTGACCATT TTA AACGATCAC TTTCTTTATTATTTT SAG1588 1593651 - 1593103 - | RNA methyltransferase SAG1589 1595176 - 1593824 - | amino acid permease, putative TERM 2077 1595299 - 1595266 - H 87 -12.1 -2.78816 | gap 1, opp_overlap 1595264 1595255 TTATTTTTCACCAGA TTCTGATAAGAG-AAT CAT ATTACTCTTATCAGAA AGATGAAAACGTTTT TERM 2078 1595494 - 1595483 - g 76 -2.2 -5.49579 | TGAGAAAAAAGAAAA CGTC CTTA AACG TGTCACTAAACAGCA trkA 1595382 - 1596731 + | potassium transporter peripheral membrane component SAG1591 1596748 - 1598175 + | cation uptake protein TERM 2079 1598223 - 1598183 - T 100 -21.7 -4.11884 | opp_overlap 1598186 1598191, overlap 1598186 1598191 AACTATAATTACAAA TAATAAAACGGATATATCA ATC TGATATATCCGTTTTATTA CGTCTTAAGCTAAAA TERM 2080 1598220 - 1598186 - T 100 -19 -4.16837 | opp_overlap 1598186 1598191, overlap 1598183 1598191 TATAATTACAAATAA TAAAACGGATATATCA ATC TGATATATCCGTTTTA TTACGTCTTAAGCTA TERM 2081 1598186 - 1598220 + T 100 -19 -3.19026 | opp_overlap 1598186 1598183 1598191, overlap 1598191 TATAATTACAAATAA TAAAACGGATATATCA ATC TGATATATCCGTTTTA TTACGTCTTAAGCTA TERM 2082 1598215 - 1598191 - T 100 -14.5 -5.05116 | opp_overlap 1598186 1598191, overlap 1598186 1598183 TTACAAATAATAAAA CGGATATATCA ATC TGATATATCCG TTTTATTACGTCTTA TERM 2083 1598191 - 1598215 + T 100 -14.5 -4.71776 | opp_overlap 1598191 1598186 1598183, overlap 1598186 TTACAAATAATAAAA CGGATATATCA ATC TGATATATCCG TTTTATTACGTCTTA SAG1592 1598450 - 1598199 - | hypothetical protein rluB 1599172 - 1598450 - | ribosomal large subunit pseudouridine synthase B scpB 1599746 - 1599162 - | segregation and condensation protein B scpA 1600450 - 1599743 - | segregation and condensation protein A xerD 1601190 - 1600450 - | site-specific tyrosine recombinase XerD-like protein SAG1597 1601653 - 1601180 - | CBS domain-containing protein SAG1598 1602171 - 1601650 - | hypothetical protein SAG1599 1603127 - 1602153 - | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein murI 1603918 - 1603124 - | glutamate racemase TERM 2084 1603948 - 1603972 + r 83 -10.8 -2.89564 | gap 1, opp_overlap 1603948, overlap 1603950 TATTAGTGACTAAAA GAGGCT-GGAC AACA GTCCTAGCCTC TCTATACAATAACCA TERM 2085 1603972 - 1603948 - R 100 -10.8 -4.28994 | gap 1, opp_overlap 1603948 1603950 TATTAGTGACTAAAA GAGGCT-GGAC AACA GTCCTAGCCTC TCTATACAATAACCA SAG1601 1604332 - 1604093 - | hypothetical protein SAG1602 1605032 - 1604490 - | hypothetical protein TERM 2086 1605096 - 1605063 - R 100 -17.7 -4.57755 | opp_overlap 1605066 AGCTATTATACAAAA CAACCTTACAGGTGT AAAG ACACCTGTAAGGTTA TTTGTCTATGTATAA TERM 2087 1605066 - 1605093 + r 100 -17.2 -4.2028 | opp_overlap 1605063 TATTATACAAAACAA CCTTACAGGTGT AAAG ACACCTGTAAGG TTATTTGTCTATGTA SAG1603 1605615 - 1605094 - | biotin repressor family transcriptional regulator TERM 2088 1605676 - 1605656 - R 100 -10.5 -4.93365 | overlap 1605669 TTTCACAATTAAAAA CTGGCTAGA ATA TCTAACCAG TTAGCCTCAATCATT SAG1604 1606372 - 1605683 - | hypothetical protein TERM 2089 1606344 - 1606325 - G 74 -3.6 -5.16237 | opp_overlap 1606324 1606325, overlap 1606326 AATCTTAGCAAAAAA TTGATTCA GCCC TGAATCAG ATTGTGTGTAAATGA SAG1605 1606898 - 1606395 - | hypothetical protein SAG1606 1607679 - 1606936 - | RNA methyltransferase SAG1607 1607711 - 1607989 + | acylphosphatase SAG1608 1608074 - 1609006 + | OxaA-like protein precursor TERM 2090 1609106 - 1609076 - T 83 -5.7 -5.29385 | gap 2, opp_overlap 1609076 AATTCAAGTAAAAAA GACTTAGTTCTATGT CCT ACATAG--CTAAGTC TTTTTAGTTTTGCCT TERM 2091 1609076 - 1609106 + T 80 -5.7 -5.10154 | gap 2, opp_overlap 1609076 AATTCAAGTAAAAAA GACTTAGTTCTATGT CCT ACATAG--CTAAGTC TTTTTAGTTTTGCCT TERM 2092 1609178 - 1609139 - T 100 -10.2 -4.96848 | CTTTTCATATAAAAA GCACCCTAAAAGTCAGAT AAAA ATCTAGCTTTTAAAGTGC AAGTAATCTAGCTAA SAG1609 1609871 - 1609206 - | amino acid ABC transporter, permease protein SAG1610 1610752 - 1609895 - | amino acid ABC transporter, substrate-binding protein TERM 2093 1610248 - 1610260 + g 78 -7.7 -4.28651 | overlap 1610255 CATAAATAACAGGTT CAGCA CCT TGCTG TTTTGCAATTTTCAT SAG1611 1612373 - 1610913 - | amidase TERM 2094 1611639 - 1611662 + g 70 -3.2 -5.00616 | gap 1, opp_overlap 1611639, overlap 1611642 TTTACTAACGCTAAA CTC-GAAAAGA CTC TCTTTGCTGAG TTTTTTCAGGGGAAA TERM 2095 1612463 - 1612431 - R 100 -10.1 -5.54264 | opp_overlap 1612428 1612431 1612433 1612436 1612441 AAATACTTAAAAAAA TAGAATAACGTCTAG ACT CTAGATATTATTCTA TGATTTATACTATTA TERM 2096 1612431 - 1612463 + r 81 -10.1 -3.06651 | opp_overlap 1612431, overlap 1612428 1612433 1612436 1612441 AAATACTTAAAAAAA TAGAATAACGTCTAG ACT CTAGATATTATTCTA TGATTTATACTATTA TERM 2097 1612433 - 1612461 + r 70 -8.3 -3.07856 | opp_overlap 1612431, overlap 1612431 1612428 1612436 1612441 ATACTTAAAAAAATA GAATAACGTCTAG ACT CTAGATATTATTC TATGATTTATACTAT greA 1612958 - 1612476 - | transcription elongation factor GreA TERM 2098 1613027 - 1612997 - R 85 -10.7 -3.46068 | opp_overlap 1613003, overlap 1613003 TTTTCAAGTCAAAGA TATAAACATGATG ACTCG CACCATGTTTATA AGCTTAGTTAATTTG SAG1613 1614833 - 1613031 - | hypothetical protein TERM 2099 1614673 - 1614689 + g 81 -8.7 -4.04773 | overlap 1614681 TCTGCCATCAATTGT GCTGTTC TGC GAGCAGC TTCTTTGGCTTCTTG SAG1614 1615423 - 1614920 - | acetyltransferase TERM 2100 1615497 - 1615474 - R 76 -9.6 -3.04598 | ATAAAGTCAGATAGA GGACTGAGAA ACTT CTCTCAGCCC TTACCATCAACTTAT murC 1616840 - 1615509 - | UDP-N-acetylmuramate--L-alanine ligase SAG1616 1617467 - 1616850 - | hypothetical protein TERM 2101 1616888 - 1616899 + g 76 -5.8 -4.55697 | TCAGATTTAATTCTT GAGC CTTG GCTC TTTCTTTATGAAACT SAG1617 1617570 - 1617472 - | hypothetical protein TERM 2102 1617574 - 1617611 + r 84 -10.2 -3.4178 | opp_overlap 1617583, overlap 1617589 TTTTTCATTCATTTA TATAAAAAAGAAAGCG AGAGAC CACTTTCTTTTTTATA TTATAGTCACATCAT TERM 2103 1617602 - 1617583 - R 82 -5 -5.38047 | opp_overlap 1617574 1617589 CATTTATATAAAAAA GAAAGCGA GAGA CCACTTTC TTTTTTATATTATAG TERM 2104 1617589 - 1617602 + r 77 -3.1 -5.5208 | opp_overlap 1617583, overlap 1617574 TATAAAAAAGAAAGC GAGAG ACCA CTTTC TTTTTTATATTATAG SAG1618 1620730 - 1617632 - | Snf2 family protein TERM 2105 1617985 - 1618005 + g 73 -6.2 -4.49337 | TTTCATGACGTTCAT TTGCTGGT GTAGA ACCAGTAA TTTTATAAGTTGTAA SAG1619 1622026 - 1620893 - | IS1548 transposase TERM 2106 1622183 - 1622162 - R 84 -3.7 -5.80003 | GTAACAAATAAAAAA GGCTAAAAC AACT GTCCTAACC TTCTATTTCAATTTC engA 1623521 - 1622211 - | GTP-binding protein EngA TERM 2107 1622344 - 1622333 - G 74 -4.4 -5.06414 | opp_overlap 1622341, overlap 1622341 CTTCGTTAACAAAAA CAAC GAAA GTTG GTGGTTTAACAGCAA TERM 2108 1622604 - 1622618 + g 71 -5 -4.69664 | AGCTTCCCACTGACT GACAGT ATG ATTGTC TTTTTCGATAGTATC dnaI 1624471 - 1623569 - | primosomal protein DnaI SAG1622 1625643 - 1624468 - | hypothetical protein SAG1623 1626122 - 1625643 - | transcriptional regulator NrdR TERM 2109 1626267 - 1626231 - R 70 -4.6 -4.91977 | opp_overlap 1626234 1626259, overlap 1626234 TATCAAAACACAAAA TAATCCTTATGCCT TTTATCATT AAGCATAAGGATTT TTCTTATATTTCTTT TERM 2110 1626234 - 1626264 + r 77 -4.1 -5.33331 | opp_overlap 1626231 1626234, overlap 1626259 CAAAACACAAAATAA TCCTTATGCCT TTTATCATT AAGCATAAGGA TTTTTCTTATATTTC TERM 2111 1626264 - 1626234 - R 74 -6.3 -4.52747 | opp_overlap 1626234 1626259, overlap 1626231 CAAAACACAAAATAA TCCTTATGCCT TTTATCATT AAGCATAAGGA TTTTTCTTATATTTC csrS 1627776 - 1626271 - | sensor histidine kinase CsrS TERM 2112 1627411 - 1627401 - G 73 -2.4 -5.26316 | TCAGTGTAGAAAAAA CTGG TTT CCTG TTGACATCGTATAGG TERM 2113 1627595 - 1627565 - G 100 -17.8 -3.60627 | opp_overlap 1627565, overlap 1627550 TCATCGGATGTCAAA CTAGAGTTCGCTTG CGA CAAACGAACTCTAG TTTTTTCTAATGACC TERM 2114 1627565 - 1627595 + g 100 -15.6 -5.31275 | opp_overlap 1627565 1627550 TCATCGGATGTCAAA CTAGAGTTCGCTTG CGA CAAACGAACTCTAG TTTTTTCTAATGACC csrR 1628455 - 1627766 - | DNA-binding response regulator CsrR SAG1626 1629223 - 1628690 - | hypothetical protein TERM 2115 1629320 - 1629289 - R 100 -11 -5.40072 | overlap 1629294 TTTGTCTTAAAAAAA CAAAACGCAAGGCA TAGC TACCCTACGTTTTG TTAACGACTACATAT TERM 2116 1629315 - 1629294 - R 85 -5.1 -5.55855 | overlap 1629289 CTTAAAAAAACAAAA CGCAAGGCA TAGC TACCCTACG TTTTGTTAACGACTA htpX 1630218 - 1629328 - | heat shock protein HtpX TERM 2117 1629845 - 1629861 + g 71 -8.7 -3.27808 | overlap 1629847 GCTAATAGGCCTGTC GTTGCTG CAA CAGCAGC ATTTTCTGGCTTAGA TERM 2118 1629847 - 1629862 + g 90 -9 -4.4715 | overlap 1629845 TAATAGGCCTGTCGT TGCTGC AACA GCAGCA TTTTCTGGCTTAGAG lemA 1630793 - 1630239 - | hypothetical protein TERM 2119 1630772 - 1630762 - G 75 -5.4 -4.82212 | opp_overlap 1630762 CAAATAACAAACAAA GCAA TAA TTGC TATTAAAATCATAGT gidB 1630921 - 1631634 + | glucose-inhibited division protein B SAG1630 1631649 - 1633028 + | sodium transport family protein SAG1631 1633041 - 1633712 + | Trk family potassium uptake protein , putative TERM 2120 1633749 - 1633719 - T 100 -10 -4.99947 | opp_overlap 1633726, overlap 1633726 TTTAACTAAAGAAAA TAAAAAACTGAC TATTAAG GTCAGTTTTTTA TTGCCATGGGTTATA TERM 2121 1633742 - 1633726 - T 88 -3.7 -5.95449 | opp_overlap 1633726, overlap 1633719 AAAGAAAATAAAAAA CTGAC TATTAAG GTCAG TTTTTTATTGCCATG TERM 2122 1633726 - 1633742 + T 81 -4.4 -5.46657 | opp_overlap 1633726 1633719 AAAGAAAATAAAAAA CTGACT ATTAA GGTCAG TTTTTTATTGCCATG SAG1632 1634577 - 1633747 - | cobalt transport family protein TERM 2123 1633865 - 1633880 + g 74 -2.6 -5.26119 | gap 1, overlap 1633867 TCCAAAGATTGCTTA GA-GTAC CAA GTACGTC TTTTATTTTTACCAA SAG1633 1636246 - 1634570 - | ABC transporter, ATP-binding protein TERM 2124 1636018 - 1635996 - G 78 -10.7 -3.09117 | overlap 1635993 1635998 GTAGAAACTAAATGA GACTTGTCA TATAT TGACAAGTC AAAAGCATTTTTATG SAG1634 1636901 - 1636263 - | hypothetical protein TERM 2125 1636655 - 1636645 - G 79 -3.2 -5.5943 | AAACCAGTAAAAAAA CCAA CTC CTGG TCCATAAATAACTGC TERM 2126 1636970 - 1636946 - R 88 -6.5 -5.32699 | TTAAATACCAAAAAA GATCTCAGATA GAA TACCTAAGACC TTCATTAGTTTATTT SAG1635 1638188 - 1636980 - | serine/threonine transporter SstT brnQ-2 1638364 - 1639731 + | branched-chain amino acid transport system II carrier protein TERM 2127 1639741 - 1639759 + F 73 -4.6 -5.09259 | opp_overlap 1639736 1639741, overlap 1639736 GCATAATAATTTAAA GCAGTA CGAAAAT TACTGC TTTTATTTTAAAATA TERM 2128 1639986 - 1640014 + G 78 -8.9 -3.68351 | CATATCCTTGGTGGC GATGTTCCTGCTT GTA AACCAGGAACAAC TTTAGGTCATGAAGG adh 1639845 - 1640900 + | alcohol dehydrogenase, zinc-containing TERM 2129 1640955 - 1640912 - T 100 -17.2 -3.62591 | opp_overlap 1640922, overlap 1640922 CTGATAATTTTTAAA CAAATAAAAATGTGAGAAGA ATAG CCTTCTCACATTTTTATTTA TGACTCAAGCGACGT TERM 2130 1640922 - 1640945 + T 100 -9.7 -5.38958 | opp_overlap 1640912 1640922 TTAAACAAATAAAAA TGTGAGAAG AATAGC CTTCTCACA TTTTTATTTATGACT TERM 2131 1640945 - 1640922 - T 100 -10.4 -5.5454 | opp_overlap 1640922, overlap 1640912 TTAAACAAATAAAAA TGTGAGAAGA ATAG CCTTCTCACA TTTTTATTTATGACT SAG1638 1641641 - 1640949 - | ABC transporter, permease protein SAG1639 1642708 - 1641638 - | ABC transporter, ATP-binding protein SAG1640 1644077 - 1642701 - | hypothetical protein SAG1641 1645035 - 1644211 - | YaeC family protein TERM 2132 1645166 - 1645145 - R 83 -4.5 -5.60689 | opp_overlap 1645139 1645145 CTATATAACAAAAAA CTAAGGA TTGACATC TCCTTAG TTTTTATTACTACTT TERM 2133 1645145 - 1645166 + r 77 -4.5 -5.16071 | opp_overlap 1645145, overlap 1645139 CTATATAACAAAAAA CTAAGGA TTGACATC TCCTTAG TTTTTATTACTACTT SAG1642 1646009 - 1645176 - | ABC transporter, substrate-binding protein SAG1643 1646800 - 1646111 - | glutamine amidotransferase, class I SAG1644 1646907 - 1646794 - | hypothetical protein TERM 2134 1646921 - 1646950 + r 75 -5.1 -5.04385 | opp_overlap 1646926, overlap 1646926 AACTCTCACAAAAAT AAAAACCATAGTA TTAA TACTACGGTTTTA TTTTTTAGAAATCTG TERM 2135 1646945 - 1646926 - R 100 -7.2 -5.69262 | opp_overlap 1646921 1646926 TCACAAAAATAAAAA CCATAGTA TTAA TACTACGG TTTTATTTTTTAGAA TERM 2136 1646926 - 1646945 + r 82 -5 -5.42198 | opp_overlap 1646926, overlap 1646921 TCACAAAAATAAAAA CCATAGTA TTAA TACTACGG TTTTATTTTTTAGAA SAG1645 1647671 - 1646955 - | hypothetical protein SAG1646 1647795 - 1647697 - | hypothetical protein SAG1647 1648775 - 1647789 - | dihydroxyacetone kinase family protein SAG1648 1649321 - 1648785 - | TetR family transcriptional regulator TERM 2137 1648921 - 1648965 + g 72 -8.1 -3.55447 | opp_overlap 1648919 1648916, overlap 1648922 TTAATAAATGTAACT CTTTCTTTCTGATTAAAGTTA GAT TTACTATAATCAGAAAGAAGC TTATCTACTAACTGC TERM 2138 1648922 - 1648964 + g 81 -11.6 -2.72947 | opp_overlap 1648919 1648916, overlap 1648921 TAATAAATGTAACTC TTTCTTTCTGATTAAAGTTA GAT TTACTATAATCAGAAAGAAG CTTATCTACTAACTG SAG1649 1649385 - 1649498 + | hypothetical protein SAG1650 1649495 - 1650484 + | dihydroxyacetone kinase family protein TERM 2139 1651037 - 1651049 + G 76 -6.3 -4.65747 | opp_overlap 1651036 CTCAGTAGGACACAT TGATC CAG GATCA TTTTCTTCAGGATTA SAG1651 1650522 - 1651100 + | dihydroxyacetone kinase family protein SAG1652 1651100 - 1651474 + | hypothetical protein TERM 2140 1651719 - 1651735 + G 70 -6.5 -4.05446 | overlap 1651716 TTGGAGCAATTTCTT GGGGACA AGT TATCCCC TTTATCATTGCACAG TERM 2141 1651764 - 1651778 + G 71 -5 -4.54821 | opp_overlap 1651764, overlap 1651766 AGATGTTAGGAGCAA TGGTTG CGG CAACTA TTTTATGGTTACACT glpF-2 1651484 - 1652197 + | glycerol uptake facilitator protein TERM 2142 1652227 - 1652206 - T 100 -11.7 -5.27477 | opp_overlap 1652206 AGTTTAACTAAAAAA CCAGAAAGT TAAT ACTTTCTGG TTTTTCATAGTTGCA TERM 2143 1652206 - 1652227 + T 100 -11.7 -4.81083 | opp_overlap 1652206 AGTTTAACTAAAAAA CCAGAAAGT TAAT ACTTTCTGG TTTTTCATAGTTGCA TERM 2144 1652291 - 1652257 - T 71 -6.6 -4.08945 | overlap 1652259 1652266 AGTATGCTTTCAAAA TAGAAAAAACACCAAA ATA CTTAGTGTTCTTTCTG GAGATTTTATGAAAA TERM 2145 1652289 - 1652259 - T 80 -9.2 -3.6422 | overlap 1652257 1652266 TATGCTTTCAAAATA GAAAAAACACCAAA ATA CTTAGTGTTCTTTC TGGAGATTTTATGAA TERM 2146 1652282 - 1652266 - T 79 -3.7 -5.63645 | overlap 1652259 1652257 TCAAAATAGAAAAAA CACCAAA ATA CTTAGTG TTCTTTCTGGAGATT TERM 2147 1652416 - 1652461 + T 100 -15.1 -4.15998 | opp_overlap 1652422 1652423 1652430, overlap 1652423 1652430 CCAAGAAATGACTAC TATTAAGCTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAGTCTAGTA TTATTTAGTTTCAGT TERM 2148 1652455 - 1652422 - T 100 -14.1 -3.2396 | opp_overlap 1652416 1652423 1652430, overlap 1652423 1652430 AATGACTACTATTAA GCTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAGT CTAGTATTATTTAGT TERM 2149 1652423 - 1652454 + T 100 -17.6 -2.9961 | opp_overlap 1652422 1652423 1652430, overlap 1652416 1652430 ATGACTACTATTAAG CTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAG TCTAGTATTATTTAG TERM 2150 1652454 - 1652423 - T 100 -17.6 -2.53894 | opp_overlap 1652423 1652416 1652430, overlap 1652422 1652430 ATGACTACTATTAAG CTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAG TCTAGTATTATTTAG TERM 2151 1652430 - 1652447 + T 100 -9.9 -4.83269 | opp_overlap 1652423 1652422 1652430, overlap 1652423 1652416 CTATTAAGCTAAAAA GCGCTAT TGAC ATAGCGC TTTTTAGTCTAGTAT TERM 2152 1652447 - 1652430 - T 100 -9.9 -4.7629 | opp_overlap 1652430 1652423 1652416, overlap 1652423 1652422 CTATTAAGCTAAAAA GCGCTAT TGAC ATAGCGC TTTTTAGTCTAGTAT SAG1654 1652866 - 1652462 - | hypothetical protein SAG1655 1653718 - 1653005 - | MerR family transcriptional regulator TERM 2153 1653190 - 1653217 + g 75 -8.6 -3.63627 | overlap 1653193 TCTGAACTTGTTTTT GAACTTTCTC ATCTGTCG GAGAAAGTTC TTTCAACTGTCCAAA SAG1656 1654920 - 1653811 - | hypothetical protein TERM 2154 1653856 - 1653845 - G 78 -5.8 -4.84761 | opp_overlap 1653844 ACAGGTTGATAAAAA GGGA TACG TCCC CATGTTTGCTCTGCT SAG1657 1655168 - 1654917 - | hypothetical protein SAG1658 1655925 - 1655191 - | hypothetical protein TERM 2155 1655969 - 1655984 + r 78 -9 -3.4055 | opp_overlap 1655969 TACATCTCTCAAAAA GCAGTC CCAA GACTGC TTAGCTTTATTCTGT TERM 2156 1655984 - 1655969 - R 90 -9 -4.59109 | opp_overlap 1655969 TACATCTCTCAAAAA GCAGTC CCAA GACTGC TTAGCTTTATTCTGT TERM 2157 1656043 - 1656006 - R 72 -7.1 -3.86346 | opp_overlap 1656008, overlap 1656008 TTATTCTGTCATAAA GACTTCAGCATCAAGCA ATGG TGCTTCATGCCAAAGTT TTTCAAGGTTATAGT TERM 2158 1656008 - 1656041 + r 71 -5.3 -4.63542 | opp_overlap 1656006 1656008 ATTCTGTCATAAAGA CTTCAGCATCAAGCA ATGG TGCTTCATGCCAAAG TTTTTCAAGGTTATA TERM 2159 1656041 - 1656008 - R 80 -9.7 -3.52113 | opp_overlap 1656008, overlap 1656006 ATTCTGTCATAAAGA CTTCAGCATCAAGCA ATGG TGCTTCATGCCAAAG TTTTTCAAGGTTATA SAG1659 1656347 - 1655991 - | iojap-related protein SAG1660 1656870 - 1656349 - | isochorismatase family protein SAG1661 1657520 - 1656933 - | hypothetical protein nadD 1658149 - 1657517 - | nicotinic acid mononucleotide adenylyltransferase SAG1663 1658596 - 1658279 - | hypothetical protein SAG1664 1659807 - 1658689 - | GTP-binding protein YqeH SAG1665 1660340 - 1659807 - | HAD superfamily hydrolase TERM 2160 1660420 - 1660407 - R 100 -6.7 -5.68438 | opp_overlap 1660407 CGAGTAAAGAAAAAA GGTCT TTAA AGACC TTTAAATTAGGGTTT SAG1666 1661365 - 1660451 - | hypothetical protein TERM 2161 1661037 - 1661017 - G 76 -7.7 -4.08706 | overlap 1661020 TGTTTAGGATACAAA CAATACTCA AAA TAAGTATTG GTGCCATATATTGCA TERM 2162 1661467 - 1661500 + r 91 -9.7 -4.43392 | opp_overlap 1661470 1661476 1661477, overlap 1661465 TCGTGCTAAATTAGC GAATAAAAACCAGCC AAAA GGCTGATTTCTATTC TTCTTTTAATTTTGC TERM 2163 1661497 - 1661470 - R 81 -10 -3.1634 | opp_overlap 1661467 1661465, overlap 1661476 1661477 TGCTAAATTAGCGAA TAAAAACCAGCC AAAA GGCTGATTTCTA TTCTTCTTTTAATTT TERM 2164 1661491 - 1661476 - R 85 -6.8 -5.11063 | opp_overlap 1661467 1661465, overlap 1661470 1661477 ATTAGCGAATAAAAA CCAGCC AAAA GGCTGA TTTCTATTCTTCTTT TERM 2165 1661490 - 1661477 - R 75 -8.1 -3.65554 | opp_overlap 1661467 1661465, overlap 1661476 1661470 TTAGCGAATAAAAAC CAGCC AAAA GGCTG ATTTCTATTCTTCTT gatB 1662937 - 1661495 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 2166 1662917 - 1662903 - G 71 -8.6 -3.1585 | opp_overlap 1662900, overlap 1662901 GTATTTAATTCAACA TGGACT TCA AGTCCA ATGACTGTTTCAAAA gatA 1664403 - 1662937 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 1664705 - 1664403 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 2167 1664803 - 1664841 + r 100 -11.2 -4.68132 | opp_overlap 1664806 1664810, overlap 1664805 1664806 1664810 TATCCCAGCTTTTCA TAATAAACGCTTCTTACC TAT GATAAGAAGCGTTTACTG TTTATTTATCTATTG TERM 2168 1664805 - 1664839 + r 95 -11.6 -3.92887 | opp_overlap 1664806 1664810, overlap 1664803 1664806 1664810 TCCCAGCTTTTCATA ATAAACGCTTCTTACC TAT GATAAGAAGCGTTTAC TGTTTATTTATCTAT TERM 2169 1664838 - 1664806 - R 100 -17.3 -3.29511 | opp_overlap 1664805 1664803 1664806 1664810, overlap 1664810 CCCAGCTTTTCATAA TAAACGCTTCTTACC TAT GATAAGAAGCGTTTA CTGTTTATTTATCTA TERM 2170 1664806 - 1664838 + r 100 -15.1 -2.94105 | opp_overlap 1664806 1664810, overlap 1664805 1664803 1664810 CCCAGCTTTTCATAA TAAACGCTTCTTACC TAT GATAAGAAGCGTTTA CTGTTTATTTATCTA TERM 2171 1664810 - 1664834 + r 100 -11.5 -4.10269 | opp_overlap 1664810 1664806, overlap 1664806 1664805 1664803 GCTTTTCATAATAAA CGCTTCTTACC TAT GATAAGAAGCG TTTACTGTTTATTTA TERM 2172 1664834 - 1664810 - R 100 -13.7 -4.30719 | opp_overlap 1664806 1664805 1664803 1664810, overlap 1664806 GCTTTTCATAATAAA CGCTTCTTACC TAT GATAAGAAGCG TTTACTGTTTATTTA ppdK 1667488 - 1664843 - | pyruvate phosphate dikinase SAG1671 1668331 - 1667501 - | hypothetical protein SAG1672 1668854 - 1668342 - | CBS domain-containing protein TERM 2173 1669059 - 1669025 - H 81 -10.4 -2.86177 | opp_overlap 1669016 1669024 1669023 1669025 1669027, overlap 1669027 ATATGTTATATTATA TATCTTTTTTTACT GAAATCA AGTAAAAAAAGATA CTATTTTAAAAATAA TERM 2174 1669025 - 1669059 + H 81 -10.4 -2.79004 | opp_overlap 1669025 1669027, overlap 1669016 1669024 1669023 1669027 ATATGTTATATTATA TATCTTTTTTTACT GAAATCA AGTAAAAAAAGATA CTATTTTAAAAATAA TERM 2175 1669057 - 1669027 - H 71 -8.6 -2.97925 | opp_overlap 1669027 1669025 1669024 1669023, overlap 1669025 ATGTTATATTATATA TCTTTTTTTACT GAAATCA AGTAAAAAAAGA TACTATTTTAAAAAT TERM 2176 1669027 - 1669057 + H 71 -8.6 -2.93891 | opp_overlap 1669025 1669027, overlap 1669025 1669024 1669023 ATGTTATATTATATA TCTTTTTTTACT GAAATCA AGTAAAAAAAGA TACTATTTTAAAAAT SAG1673 1669160 - 1670125 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 2177 1670166 - 1670127 - T 100 -17.6 -3.80841 | opp_overlap 1670130 1670135, overlap 1670128 1670135 ATGATTACGACTAAA CTATAAAAGAGGTTAGAT AAAA ATCTAACCTCTTTTATAA TTCAACTAAAGAATA TERM 2178 1670165 - 1670128 - T 100 -18.9 -2.88023 | opp_overlap 1670130 1670135, overlap 1670127 1670135 TGATTACGACTAAAC TATAAAAGAGGTTAGAT AAAA ATCTAACCTCTTTTATA ATTCAACTAAAGAAT TERM 2179 1670130 - 1670163 + T 100 -17.1 -2.73364 | opp_overlap 1670128 1670127 1670135, overlap 1670135 ATTACGACTAAACTA TAAAAGAGGTTAGAT AAAA ATCTAACCTCTTTTA TAATTCAACTAAAGA TERM 2180 1670158 - 1670135 - T 100 -12.6 -4.63172 | opp_overlap 1670130 1670135, overlap 1670128 1670127 GACTAAACTATAAAA GAGGTTAGAT AAAA ATCTAACCTC TTTTATAATTCAACT TERM 2181 1670135 - 1670158 + T 100 -12.6 -4.54821 | opp_overlap 1670135 1670128 1670127, overlap 1670130 GACTAAACTATAAAA GAGGTTAGAT AAAA ATCTAACCTC TTTTATAATTCAACT SAG1674 1670720 - 1670172 - | isochorismatase family protein TERM 2182 1670777 - 1670753 - R 95 -9.3 -5.0538 | CTTGATTTCAAAAAA GGAACTGAAAG CTA CTCCCAGTCCC ATGCTATGATTAATT SAG1675 1671572 - 1670787 - | transcriptional repressor CodY TERM 2183 1671711 - 1671729 + r 75 -2.4 -5.59534 | TTCTAGCGCTTGTAT TGGCTT AAAAAGC GAGCCA TTTTTTCTTGTAGTT SAG1676 1672909 - 1671698 - | aminotransferase AlaT TERM 2184 1671820 - 1671832 + g 77 -2.7 -5.4593 | TAAATCCTCTACCGT GTGTT AGT AATAC TTTTTCTTGTTTTAA TERM 2185 1672624 - 1672643 + g 95 -10.8 -4.43844 | opp_overlap 1672623 1672626 TAACAATGTATATAT CATCCATG TCAA CATGGATG TTTTGTAACTGGTAA SAG1677 1673176 - 1673628 + | hypothetical protein TERM 2186 1673654 - 1673680 + T 100 -15.4 -5.49568 | opp_overlap 1673654 GCTCACTTTCTAAAA TATCCTGAGTTA TAT TAACTCAGGATA TTTTTATTTTCGATT TERM 2187 1673680 - 1673654 - T 100 -15.4 -4.09685 | opp_overlap 1673654 GCTCACTTTCTAAAA TATCCTGAGTTA TAT TAACTCAGGATA TTTTTATTTTCGATT SAG1678 1675066 - 1673684 - | HAD superfamily hydrolase SAG1679 1675135 - 1676097 + | asparaginase family protein TERM 2188 1676087 - 1676142 + T 100 -18.2 -4.01184 | opp_overlap 1676105, overlap 1676088 1676094 1676105 ATCTAAAAGACTATA TTGAAGGTTGATAAAAAACTCTAGAA ATAT TTCTAGAGTTTTTTATTAATTTTCAG TTTGTAATACTCTCT TERM 2189 1676088 - 1676141 + T 100 -19.5 -2.99987 | opp_overlap 1676105, overlap 1676087 1676094 1676105 TCTAAAAGACTATAT TGAAGGTTGATAAAAAACTCTAGAA ATAT TTCTAGAGTTTTTTATTAATTTTCA GTTTGTAATACTCTC TERM 2190 1676094 - 1676135 + T 100 -17.1 -4.40173 | opp_overlap 1676105, overlap 1676088 1676087 1676105 AGACTATATTGAAGG TTGATAAAAAACTCTAGAA ATAT TTCTAGAGTTTTTTATTAA TTTTCAGTTTGTAAT TERM 2191 1676105 - 1676124 + T 100 -9.4 -5.61689 | opp_overlap 1676105, overlap 1676094 1676088 1676087 AAGGTTGATAAAAAA CTCTAGAA ATAT TTCTAGAG TTTTTTATTAATTTT TERM 2192 1676124 - 1676105 - T 100 -9.4 -5.25803 | opp_overlap 1676105 1676094 1676088 1676087 AAGGTTGATAAAAAA CTCTAGAA ATAT TTCTAGAG TTTTTTATTAATTTT aroE 1677010 - 1676132 - | shikimate 5-dehydrogenase TERM 2193 1677098 - 1677076 - R 80 -6.4 -4.88407 | opp_overlap 1677076 TGACTCAATTAAAAA GAGAGTAT GTAATTT ATACTCTC TCCCTTAGTTTAAGG SAG1681 1678022 - 1677108 - | aldo/keto reductase family oxidoreductase TERM 2194 1678140 - 1678120 - R 72 -4.7 -4.84529 | opp_overlap 1678120 1678122 TTACAAATGCAAAAA GCTGAGTAA ATT TAACTCAAC TTTTTTTCTGATACT TERM 2195 1678120 - 1678140 + r 75 -2.5 -5.67967 | opp_overlap 1678120, overlap 1678122 TTACAAATGCAAAAA GCTGAGTAA ATT TAACTCAAC TTTTTTTCTGATACT recG 1680328 - 1678313 - | ATP-dependent DNA helicase RecG TERM 2196 1680377 - 1680393 + r 74 -6.5 -4.43576 | opp_overlap 1680377 AAAGATCACCAAAAA GGCGC CTCAAGA GCGCC TTTATTATGTCTAAT TERM 2197 1680393 - 1680377 - R 86 -7.2 -4.81734 | opp_overlap 1680377 AAAGATCACCAAAAA GGCGCC TCAAG AGCGCC TTTATTATGTCTAAT SAG1683 1681946 - 1680408 - | immunogenic secreted protein, putative alr 1683139 - 1682039 - | alanine racemase TERM 2198 1682118 - 1682139 + g 77 -10.3 -2.77344 | overlap 1682117 TTTTGAGCGACGTCC GTAGTTGTA ATGT TACAACTAC CTTGTTGACCAATCA acpS 1683495 - 1683136 - | 4'-phosphopantetheinyl transferase SAG1686 1684527 - 1683520 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2199 1684632 - 1684607 - R 88 -12.1 -2.88731 | opp_overlap 1684607 1684612, overlap 1684612 TTAGACAAGTAATGA TAAAACAGTCT TCTC AGACTGTTTTA TTTTTATTTTAAAAT TERM 2200 1684607 - 1684632 + r 100 -12.1 -5.46706 | opp_overlap 1684607 1684612, overlap 1684612 TTAGACAAGTAATGA TAAAACAGTCT TCTC AGACTGTTTTA TTTTTATTTTAAAAT TERM 2201 1684627 - 1684612 - R 82 -7.6 -4.58213 | opp_overlap 1684607 1684612, overlap 1684607 CAAGTAATGATAAAA CAGTCT TCTC AGACTG TTTTATTTTTATTTT TERM 2202 1684612 - 1684627 + r 100 -7.6 -5.51078 | opp_overlap 1684612 1684607, overlap 1684607 CAAGTAATGATAAAA CAGTCT TCTC AGACTG TTTTATTTTTATTTT secA 1687181 - 1684653 - | preprotein translocase subunit SecA TERM 2203 1686440 - 1686451 + g 76 -5.8 -4.57837 | opp_overlap 1686439 CAATGATATAATCAT CGCT ATTA AGCG TTTTTACAAACATGT TERM 2204 1687111 - 1687127 + g 80 -2.3 -5.63103 | TAAGAGTCAACTTTC TTAGCTA TTT TATCTAA TTTTTTTAATTCACC TERM 2205 1687264 - 1687292 + r 73 -4.6 -5.05782 | opp_overlap 1687270, overlap 1687268 1687270 CGTTTTAATCGAGAT TAAAAAGAGTGG TATCC CCACTCTCATTA TTTTTTAACATGACT TERM 2206 1687270 - 1687286 + r 71 -8 -3.23795 | opp_overlap 1687270, overlap 1687268 1687264 AATCGAGATTAAAAA GAGTGG TATCC CCACTC TCATTATTTTTTAAC TERM 2207 1687286 - 1687270 - R 90 -8 -4.82154 | opp_overlap 1687270 1687268 1687264 AATCGAGATTAAAAA GAGTGG TATCC CCACTC TCATTATTTTTTAAC manA 1688237 - 1687290 - | mannose-6-phosphate isomerase, class I scrK 1689236 - 1688355 - | fructokinase TERM 2208 1689299 - 1689270 - R 100 -14.5 -3.38046 | opp_overlap 1689274, overlap 1689256 1689274 TCTCTATCTCAAAGA CAAAGGTTGGGAT AATT ATCCCAACCTTTA ATCCTCACTTAACAT TERM 2209 1689274 - 1689295 + r 100 -13.1 -3.80461 | opp_overlap 1689270 1689274 TATCTCAAAGACAAA GGTTGGGAT AATT ATCCCAACC TTTAATCCTCACTTA TERM 2210 1689295 - 1689274 - R 100 -13.1 -4.33928 | opp_overlap 1689274, overlap 1689270 TATCTCAAAGACAAA GGTTGGGAT AATT ATCCCAACC TTTAATCCTCACTTA SAG1690 1691223 - 1689304 - | PTS system, IIABC components TERM 2211 1690358 - 1690344 - G 75 -8.6 -3.56937 | CAAGAGGTAAATTAA GGACAA ATT TTGTCC CTGCTAAAACATAGT TERM 2212 1691246 - 1691258 + H 75 -4.9 -4.97158 | TCTCCTTTGATATTT TGAAA GCG TTTCA TTTTATTTACTCTAA TERM 2213 1691316 - 1691297 - H 73 -8 -3.5241 | overlap 1691295 CACGTCTCATAAATA TATGTCAA GCGT TTGACATA AAATAATATTTTTCG scrB 1691408 - 1692847 + | sucrose-6-phosphate hydrolase scrR 1692849 - 1693811 + | sucrose operon repressor ScrR TERM 2214 1693857 - 1693911 + T 100 -18.5 -3.43564 | gap 1, opp_overlap 1693861 1693873, overlap 1693860 1693861 1693873 CCGATAGTTATTTTT CAAA-GCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTCATTTG TTATAAATTGACTTA TERM 2215 1693860 - 1693907 + T 100 -16 -4.35604 | opp_overlap 1693861 1693873, overlap 1693857 1693861 1693873 ATAGTTATTTTTCAA AGCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTCA TTTGTTATAAATTGA TERM 2216 1693906 - 1693861 - T 100 -19.5 -3.55761 | opp_overlap 1693860 1693857 1693861 1693873, overlap 1693873 TAGTTATTTTTCAAA GCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTC ATTTGTTATAAATTG TERM 2217 1693861 - 1693906 + T 100 -19.5 -3.20639 | opp_overlap 1693861 1693873, overlap 1693860 1693857 1693873 TAGTTATTTTTCAAA GCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTC ATTTGTTATAAATTG TERM 2218 1693873 - 1693894 + T 100 -11.7 -5.13016 | opp_overlap 1693873 1693861, overlap 1693861 1693860 1693857 AAAGCAAATTAAAAA TGTGGAAGA AGAT TCTTCCACA TTTTTAATTTTCATT TERM 2219 1693894 - 1693873 - T 100 -11.7 -5.05577 | opp_overlap 1693861 1693860 1693857 1693873, overlap 1693861 AAAGCAAATTAAAAA TGTGGAAGA AGAT TCTTCCACA TTTTTAATTTTCATT nusB 1694332 - 1693898 - | transcription antitermination protein NusB SAG1694 1694714 - 1694325 - | hypothetical protein efp 1695363 - 1694803 - | elongation factor P SAG1696 1695510 - 1695394 - | hypothetical protein SAG1697 1696238 - 1696092 - | hypothetical protein SAG1698 1696590 - 1696291 - | hypothetical protein SAG1699 1696735 - 1696643 - | hypothetical protein SAG1700 1697238 - 1697008 - | hypothetical protein SAG1701 1697421 - 1697251 - | hypothetical protein SAG1702 1697999 - 1697874 - | hypothetical protein SAG1703 1698174 - 1698010 - | hypothetical protein TERM 2220 1698231 - 1698284 + r 100 -13 -4.0371 | gap 1, opp_overlap 1698232 1698248, overlap 1698232 TTCCCAGCAGTACTA ATTTTAGATGTTGATAATAG-ATGG ATCAG CTATTCTATTATCAACATCTAAAAC TTTCTGTGAAAAATC TERM 2221 1698232 - 1698283 + r 100 -16.5 -3.01905 | gap 1, opp_overlap 1698232 1698248, overlap 1698231 TCCCAGCAGTACTAA TTTTAGATGTTGATAATAG-ATGG ATCAG CTATTCTATTATCAACATCTAAAA CTTTCTGTGAAAAAT TERM 2222 1698283 - 1698232 - R 100 -14.3 -3.23216 | gap 1, opp_overlap 1698232 1698231, overlap 1698248 TCCCAGCAGTACTAA TTTTAGATGTTGATAATAG-ATGG ATCAG CTATTCTATTATCAACATCTAAAA CTTTCTGTGAAAAAT SAG1704 1698928 - 1698476 - | cytidine/deoxycytidylate deaminase family protein TERM 2223 1700096 - 1700079 - R 74 -5.6 -4.79352 | opp_overlap 1700074 1700079, overlap 1700074 TTAGCTATAAGAAAA GCAACT CATTTC AGTTGC TTTTACTTTACTATT TERM 2224 1700079 - 1700096 + r 71 -5.6 -4.61284 | opp_overlap 1700079 1700074, overlap 1700074 TTAGCTATAAGAAAA GCAACT CATTTC AGTTGC TTTTACTTTACTATT SAG1706 1700823 - 1700107 - | hypothetical protein SAG1707 1702324 - 1700825 - | EmrB/QacA family drug resistance transporter TERM 2225 1701804 - 1701775 - G 71 -5 -4.58644 | AAGGAAGAAGGAAAA TTGCACGCCATG TTAAAT CATGCCCTGCAA AATGAAATTCTTGTT TERM 2226 1702294 - 1702306 + g 78 -6.3 -4.74012 | GATTATATGGTTTGC CATGA ATA TCATG TTTTGCTTTTGTAGT TERM 2227 1702388 - 1702427 + r 78 -6.8 -4.3739 | opp_overlap 1702392, overlap 1702393 AACAAATAGGTCTTA TAAGGTTATTTTTTGATT TTTT AATCAAGAAATAATATTA TTTTCTGAAAAAATC TERM 2228 1702393 - 1702422 + r 80 -8.9 -3.75581 | opp_overlap 1702392, overlap 1702388 ATAGGTCTTATAAGG TTATTTTTTGATT TTTT AATCAAGAAATAA TATTATTTTCTGAAA SAG1708 1702528 - 1702412 - | hypothetical protein TERM 2229 1702516 - 1702502 - G 70 -2.8 -5.07486 | opp_overlap 1702502 1702504, overlap 1702504 TATTGTCAAGAAAAA GATTCT CAT AGAAAC TATTTTTTTCAAAAC TERM 2230 1702652 - 1702627 - R 100 -12.7 -4.85599 | GTTAGCTTACAAAAA GGAACTGAGTA ATAT TACTCAGCTCC CAATAAACTATCTTG uvrA 1705488 - 1702660 - | excinuclease ABC subunit A TERM 2231 1705612 - 1705588 - R 76 -3.7 -5.37043 | gap 1, opp_overlap 1705588 ATTTCATAGAAAAAA GAG-ATGAAC TAATAC GTTCATACTC TTTGTTATTATCTTC SAG1710 1706291 - 1705620 - | hypothetical protein TERM 2232 1706035 - 1706049 + g 81 -2.8 -5.61596 | opp_overlap 1706037, overlap 1706037 GTATCTAACCACATC AACCAA GGA TTGGTA TTTTTTTGTACAGAT TERM 2233 1706037 - 1706047 + g 70 -5.4 -4.45201 | opp_overlap 1706037, overlap 1706035 ATCTAACCACATCAA CCAA GGA TTGG TATTTTTTTGTACAG SAG1711 1707260 - 1706316 - | magnesium transporter CorA family protein TERM 2234 1707408 - 1707422 + r 74 -5.7 -4.73094 | opp_overlap 1707408, overlap 1707403 AAAAGAATAAAAAAA TAGCC GCTAG GGCTA TTTTATATTAATCTT TERM 2235 1707422 - 1707408 - R 100 -5.7 -6.04419 | opp_overlap 1707408 1707403 AAAAGAATAAAAAAA TAGCC GCTAG GGCTA TTTTATATTAATCTT rpsR 1707669 - 1707430 - | 30S ribosomal protein S18 ssb-3 1708205 - 1707714 - | single-strand DNA-binding protein rpsF 1708504 - 1708217 - | 30S ribosomal protein S6 TERM 2236 1708551 - 1708533 - H 80 -10.4 -2.70932 | opp_overlap 1708526 CTTTTGGTCTAATGA CTCATGAA TTT TTCATGAG TAAGTGAGGTTATGC TERM 2237 1708640 - 1708654 + H 71 -2.2 -5.47159 | TTCCCTGATATCATT TAAAGA CAT TTTTTA TTTTTCTTTATTGAA TERM 2238 1708776 - 1708757 - H 100 -10 -5.77571 | ATTAAAAAATAAAAA GGCGAGGT TTAC ACCTCACC TTCAACATATTATTT TERM 2239 1709022 - 1709038 + H 85 -8 -4.46976 | opp_overlap 1709021 AAATTACTAACACAT CTAGGG GTATA CCCTAG TTTATATTTGTTCAT TERM 2240 1709356 - 1709371 + H 74 -7.6 -3.8211 | TACCAATCTTTCTTT TGGAGA CTAG TCTCCA TTCTTATACCTAGAG TERM 2241 1709492 - 1709480 - H 79 -2.7 -5.83226 | overlap 1709472 AAGTCAAGAAAAAAA TATTG ATG CAACA TTTTTCTTCATCATT mutY 1709598 - 1710722 + | A/G-specific adenine glycosylase TERM 2242 1710729 - 1710747 + F 80 -5.3 -5.29846 | opp_overlap 1710729 AATGCTTAATCACAA GTGAACT ATGAC GGTTCAC TTTTTGTTTACAATT SAG1716 1710899 - 1711492 + | Cro/CI family transcriptional regulator TERM 2243 1711536 - 1711500 - T 100 -14.7 -3.56161 | opp_overlap 1711500 1711505 1711509, overlap 1711505 1711509 TAAGTTAGTAGATAA TAAAATAAAGCTCAGCG TGA CACTGGGCTTTATTTTA TTTAACTCAATTCAG TERM 2244 1711500 - 1711536 + T 100 -14.7 -3.68619 | opp_overlap 1711500 1711505 1711509, overlap 1711505 1711509 TAAGTTAGTAGATAA TAAAATAAAGCTCAGCG TGA CACTGGGCTTTATTTTA TTTAACTCAATTCAG TERM 2245 1711531 - 1711505 - T 100 -10.2 -4.85918 | opp_overlap 1711500 1711505 1711509, overlap 1711500 1711509 TAGTAGATAATAAAA TAAAGCTCAGCG TGA CACTGGGCTTTA TTTTATTTAACTCAA TERM 2246 1711505 - 1711531 + T 100 -10.2 -4.90778 | opp_overlap 1711505 1711500 1711509, overlap 1711500 1711509 TAGTAGATAATAAAA TAAAGCTCAGCG TGA CACTGGGCTTTA TTTTATTTAACTCAA TERM 2247 1711527 - 1711509 - T 85 -6.6 -4.94168 | opp_overlap 1711505 1711500 1711509, overlap 1711505 1711500 AGATAATAAAATAAA GCTCAGCG TGA CACTGGGC TTTATTTTATTTAAC TERM 2248 1711509 - 1711527 + T 85 -6.6 -4.96996 | opp_overlap 1711509 1711505 1711500, overlap 1711505 1711500 AGATAATAAAATAAA GCTCAGCG TGA CACTGGGC TTTATTTTATTTAAC trx 1711852 - 1711538 - | thioredoxin SAG1718 1712433 - 1711933 - | PAP2 family protein SAG1719 1714776 - 1712437 - | MutS2 family protein TERM 2249 1714844 - 1714823 - R 80 -7.3 -4.6902 | opp_overlap 1714823, overlap 1714811 TGACAACGTTAAAAA GGTTGGAAC TCTT ACTCCAACC TTACTAAACATTATA SAG1720 1715403 - 1714861 - | hypothetical protein SAG1721 1715717 - 1715406 - | hypothetical protein rnhC 1715828 - 1716721 + | ribonuclease HIII SAG1723 1716737 - 1717330 + | signal peptidase I TERM 2250 1718724 - 1718741 + G 71 -7.1 -3.86634 | opp_overlap 1718723 1718724 TAGTGACTATCAAAG TCTAGAT GACT ATCTAGA TTGTTCCTTAATTAT SAG1724 1717459 - 1719879 + | helicase, putative SAG1725 1719993 - 1720475 + | hypothetical protein TERM 2251 1720505 - 1720479 - T 85 -11 -3.27915 | opp_overlap 1720484, overlap 1720484 GAGACTAACTAAAAG TAAAAGCACTAG AAT CTAGTGCTTTTT TCTTTTCAAAGAGAG TERM 2252 1720484 - 1720500 + T 100 -10.9 -5.79595 | opp_overlap 1720479 1720484 TAACTAAAAGTAAAA GCACTAG AAT CTAGTGC TTTTTTCTTTTCAAA TERM 2253 1720500 - 1720484 - T 100 -10.9 -4.72729 | opp_overlap 1720484, overlap 1720479 TAACTAAAAGTAAAA GCACTAG AAT CTAGTGC TTTTTTCTTTTCAAA dinP 1721640 - 1720546 - | DNA polymerase IV TERM 2254 1721127 - 1721151 + g 70 -6.5 -4.0896 | TGAGGGTAAGTCCTT TTGGTTTCTCA AAG TCAGAAGCCAA TTTTGCCAAAAATTT TERM 2255 1721913 - 1721903 - g 86 -5.4 -5.28942 | opp_overlap 1721903, overlap 1721910 GATTGGAAAGAAAAA GCAA GTA TTGC TCGCTTCGTTCAAGC pflD-2 1721825 - 1724137 + | formate acetyltransferase TERM 2256 1724153 - 1724177 + F 100 -14.5 -4.69028 | opp_overlap 1724153 TTTGTATTCGATGAA GTAGGTTTGAT TAT ATCAAACCTAC TTTTATCTATATTAT TERM 2257 1724177 - 1724153 - f 100 -14.5 -3.16564 | opp_overlap 1724153 TTTGTATTCGATGAA GTAGGTTTGAT TAT ATCAAACCTAC TTTTATCTATATTAT SAG1728 1724238 - 1724612 + | FMN-binding protein TERM 2258 1724656 - 1724604 - T 100 -17.6 -3.09234 | gap 1, opp_overlap 1724617, overlap 1724617 ATAAATGTTATCCAA CTTT-TATAAAAAACTTCTCCTAGA AAAT TCTAGGAGAAGTTTTTTATTCAAAG TACGATGTTATCGCC TERM 2259 1724617 - 1724642 + T 100 -14.9 -5.45652 | opp_overlap 1724604 1724617 AACTTTTATAAAAAA CTTCTCCTAGA AAAT TCTAGGAGAAG TTTTTTATTCAAAGT TERM 2260 1724642 - 1724617 - T 100 -14.9 -5.25803 | opp_overlap 1724617, overlap 1724604 AACTTTTATAAAAAA CTTCTCCTAGA AAAT TCTAGGAGAAG TTTTTTATTCAAAGT SAG1729 1725576 - 1724647 - | hypothetical protein SAG1730 1726328 - 1725573 - | hypothetical protein TERM 2261 1726792 - 1726802 + G 78 -6.8 -4.6635 | opp_overlap 1726791 ACACTAATAACAATG GCTG GTG CAGC TTTTATTGGGGCTTT SAG1731 1726453 - 1727349 + | hypothetical protein TERM 2262 1727356 - 1727376 + T 91 -7.6 -5.19879 | opp_overlap 1727356 CATCATTAAACGAAA TCAGCTAG CAAGA CTGGCTGA TTTTTATATTTAAAA TERM 2263 1727423 - 1727392 - T 90 -9.6 -4.2349 | opp_overlap 1727400 1727418, overlap 1727400 TTTTTATATTTAAAA CAAAAAAAGACCGG TAAA CCGATCTTTCTTTA ACTATTAAAGATATA TERM 2264 1727415 - 1727400 - T 100 -6.8 -6.09196 | opp_overlap 1727400, overlap 1727392 TTTAAAACAAAAAAA GACCGG TAAA CCGATC TTTCTTTAACTATTA SAG1732 1728276 - 1727428 - | glycerol uptake facilitator protein, putative TERM 2265 1728395 - 1728437 + r 100 -13.8 -4.14397 | opp_overlap 1728372 1728400, overlap 1728400 CAAATATATTTGATA AAAAATAGAGTACTAGGT TCGGACT ACCTAGTACTCTATTTTA TTTAGTTTATAAGGT TERM 2266 1728400 - 1728432 + r 100 -13.7 -5.06223 | opp_overlap 1728400, overlap 1728395 ATATTTGATAAAAAA TAGAGTACTAGGT TCGGACT ACCTAGTACTCTA TTTTATTTAGTTTAT TERM 2267 1728432 - 1728400 - R 100 -13.7 -5.26918 | opp_overlap 1728395 1728400 ATATTTGATAAAAAA TAGAGTACTAGGT TCGGACT ACCTAGTACTCTA TTTTATTTAGTTTAT SAG1733 1728896 - 1728444 - | universal stress protein SAG1734 1730116 - 1728914 - | transporter, putative SAG1735 1730273 - 1730932 + | Crp/FNR family transcriptional regulator TERM 2268 1731765 - 1731779 + G 74 -4.3 -4.99043 | opp_overlap 1731753 ACACATTGACAGTTA TAGTC TCAAT GACTA TTTTCTTTCTCGGGG pepX 1730956 - 1733241 + | x-prolyl-dipeptidyl aminopeptidase TERM 2269 1733559 - 1733541 - g 79 -8.2 -4.10791 | AATAGCTATAAATAA TTGGAAGA GTC TCCTCCAA ACTCAACTCGAAGCT SAG1737 1733245 - 1733604 + | hypothetical protein SAG1738 1733650 - 1734630 + | polyprenyl synthetase family protein TERM 2270 1734635 - 1734684 + T 80 -9 -3.73146 | gap 1, opp_overlap 1734643 GCAAAATTTAAATAA TAAAAAAACATTCCACAA-TGCT AGAAA AGCAGTTAGGGAATGTTTTTTTA TTATCATTTATTTAT TERM 2271 1734676 - 1734643 - T 90 -4 -6.01369 | gap 1, opp_overlap 1734635 TAAATAATAAAAAAA CATTCCACAA-TGCT AGAAA AGCAGTTAGGGAATG TTTTTTTATTATCAT cydC 1736463 - 1734715 - | ABC transporter, ATP-binding protein CydC SAG1740 1738174 - 1736456 - | ABC transporter, ATP-binding protein CydD TERM 2272 1738125 - 1738091 - G 86 -10.1 -4.30719 | TTGTCCGATAATAAA GATTGCTTGAAGAAC ATCAA GTCCCGCAAGCAATC CTAACAACTTATGAA cydB 1739193 - 1738174 - | cytochrome d ubiquinol oxidase, subunit II TERM 2273 1738998 - 1738982 - G 75 -7.3 -4.21908 | overlap 1738985 TACCAGTATGGAAAA GAAGCAA ACA TTGCTCC ACCACCGGTAAGAAG cydA 1740621 - 1739194 - | cytochrome d oxidase, subunit I SAG1743 1741932 - 1740724 - | pyridine nucleotide-disulphide oxidoreductase family protein SAG1744 1742844 - 1741945 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 2274 1742451 - 1742441 - G 70 -6.8 -4.11404 | GGCAGACTAGATAAA GGTC TTG GACC AAAGGAATATAAAAC TERM 2275 1743198 - 1743167 - R 100 -14 -5.59357 | opp_overlap 1743163 AGCATACTAAAAAAA CTAGTATTACACTT TGAA AAGTGTAACACTAG CTCCAATTTGTTTTA SAG1745 1743699 - 1743253 - | hypothetical protein TERM 2276 1744206 - 1744233 + r 77 -8.6 -3.60627 | opp_overlap 1744209, overlap 1744209 TCATTCTGTGATTTA GAACATCAACAA TTTC TTGTTCATGTTC TTTGAGGTAAGCTAG SAG1746 1744459 - 1744352 - | hypothetical protein TERM 2277 1744665 - 1744644 - g 78 -5.8 -4.76213 | ACAAATGGAACAAAA GCAAGCTG ATTTAG CAGCTAGC CAGTTTACTGGAAAA SAG1747 1744582 - 1744881 + | hypothetical protein TERM 2278 1744923 - 1744886 - f 89 -7.9 -5.0538 | opp_overlap 1744890, overlap 1744890 TGCCATTCTAAAAAA TAAATCACATTTACTGA ATCA CCTGTAAATGTGATTTT TATTTCAAACTTCTT TERM 2279 1744919 - 1744890 - f 95 -8.7 -5.05153 | opp_overlap 1744890, overlap 1744886 ATTCTAAAAAATAAA TCACATTTACTGA ATCA CCTGTAAATGTGA TTTTTATTTCAAACT TERM 2280 1744890 - 1744919 + F 93 -8 -5.27938 | opp_overlap 1744890 1744886 ATTCTAAAAAATAAA TCACATTTACTG AATCAC CTGTAAATGTGA TTTTTATTTCAAACT TERM 2281 1745196 - 1745178 - g 74 -3 -5.41941 | overlap 1745180 TAAACTAAACAAAAA TTTCTCCG TCT CGGAGCTA TCAAAAGACCCTTCC cfa 1745041 - 1746231 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2282 1746274 - 1746299 + T 87 -10.5 -3.73122 | opp_overlap 1746274 1746277, overlap 1746277 TATTCTAAATAAAAA GGACTCTCTTG AATT CAAGGGAGTTC TTTAACGTTCTTCTC TERM 2283 1746299 - 1746274 - T 84 -6.1 -5.28942 | opp_overlap 1746274 1746277, overlap 1746277 TATTCTAAATAAAAA GGACTCTCTTG AATT CAAGGGAGTTC TTTAACGTTCTTCTC TERM 2284 1746277 - 1746296 + T 82 -8.6 -3.98291 | opp_overlap 1746274 1746277, overlap 1746274 TCTAAATAAAAAGGA CTCTCTTG AATT CAAGGGAG TTCTTTAACGTTCTT SAG1749 1747026 - 1746301 - | MerR family transcriptional regulator SAG1750 1747740 - 1747153 - | DNA polymerase III subunit epsilon TERM 2285 1747751 - 1747781 + r 90 -9.8 -4.27001 | opp_overlap 1747756, overlap 1747756 TTCATTATTTCTCCT AAAAAGCGCAAGGA AAC TCCTTACGCTTTTA TTCTATTTTTTATTG TERM 2286 1747776 - 1747756 - R 100 -11.9 -4.57073 | opp_overlap 1747751 1747756 TATTTCTCCTAAAAA GCGCAAGGA AAC TCCTTACGC TTTTATTCTATTTTT TERM 2287 1747756 - 1747776 + r 100 -9.7 -5.0095 | opp_overlap 1747756, overlap 1747751 TATTTCTCCTAAAAA GCGCAAGGA AAC TCCTTACGC TTTTATTCTATTTTT SAG1751 1748320 - 1747784 - | hypothetical protein SAG1752 1748455 - 1749627 + | hypothetical protein SAG1753 1750453 - 1749671 - | hypothetical protein TERM 2288 1750730 - 1750701 - g 73 -3.5 -5.10933 | opp_overlap 1750703 1750705 TGAGTTAAAAGAAAA GGGTGATTACGAA GCAC TTCGTAAACTTCC TAAAGATTCTAACCC rpsN 1750612 - 1750881 + | 30S ribosomal protein S14 TERM 2289 1751114 - 1751137 + G 91 -6.7 -5.34365 | opp_overlap 1751114 ATTTATTTTCAAAAA GCCCGGTAT GCCAAG ATACCGAGC TTTTTATTATTATAA TERM 2290 1751137 - 1751114 - g 90 -8.9 -4.60041 | opp_overlap 1751114 ATTTATTTTCAAAAA GCCCGGTAT GCCAAG ATACCGAGC TTTTTATTATTATAA SAG1755 1751089 - 1751205 + | hypothetical protein TERM 2291 1751210 - 1751190 - T 78 -7 -4.44355 | TAATCCCAAAAACAA GACTATTA TTTTG TAATAGTC ACTACTGAATAATAT SAG1756 1752267 - 1751242 - | hypothetical protein TERM 2292 1751313 - 1751328 + g 71 -4.8 -4.56775 | opp_overlap 1751315 CTAGACGTATTACAG TATGAT GGTC ATCATA TTTTTCCCAAAAACT TERM 2293 1752376 - 1752355 - R 100 -8.9 -5.82036 | opp_overlap 1752355 ATAACAAATAAAAAA TATCAAAAC AAGC GTTTTGATA TTATGAACACCTATA TERM 2294 1752355 - 1752376 + r 77 -8.9 -3.29829 | opp_overlap 1752355 ATAACAAATAAAAAA TATCAAAAC AAGC GTTTTGATA TTATGAACACCTATA SAG1757 1753397 - 1752387 - | O-sialoglycoprotein endopeptidase SAG1758 1753880 - 1753473 - | ribosomal-protein-alanine acetyltransferase, putative SAG1759 1754574 - 1753882 - | hypothetical protein SAG1760 1754753 - 1754983 + | hypothetical protein TERM 2295 1755025 - 1754996 - f 70 -7.3 -3.75295 | opp_overlap 1754990 TAGAAAGGAGTTAAA CATAATAGCTAGA GTAA TCTACCCATTATG ATAAACTTATTATGT SAG1761 1755037 - 1756716 + | metallo-beta-lactamase superfamily protein TERM 2296 1756751 - 1756718 - T 95 -10.5 -4.55295 | opp_overlap 1756723, overlap 1756723 CCCCTGATAAATAAA CAAAAGAACGGAAAA TACT TTCTCCGTTCTTTTT AATTGCCTATATTAG TERM 2297 1756723 - 1756746 + T 90 -8.2 -4.89009 | opp_overlap 1756718 1756723 GATAAATAAACAAAA GAACGGAAAA TACT TTCTCCGTTC TTTTTAATTGCCTAT TERM 2298 1756746 - 1756723 - T 100 -10.4 -5.22481 | opp_overlap 1756723, overlap 1756718 GATAAATAAACAAAA GAACGGAAAA TACT TTCTCCGTTC TTTTTAATTGCCTAT SAG1762 1757383 - 1756874 - | hypothetical protein TERM 2299 1757512 - 1757476 - R 100 -15.5 -5.66684 | opp_overlap 1757476 TAATTTACAAAAAAA CTAGTTTTAGACTTTAC AAA ATAAAGCCTAAAACTAG TTATAAACATTCTTA TERM 2300 1757476 - 1757512 + r 90 -12.6 -3.34947 | opp_overlap 1757476 TAATTTACAAAAAAA CTAGTTTTAGACTTTA CAAAA TAAAGCCTAAAACTAG TTATAAACATTCTTA glnA 1758877 - 1757531 - | glutamine synthetase, type I glnR 1759282 - 1758911 - | transcriptional regulator GlnR SAG1765 1759901 - 1759362 - | hypothetical protein TERM 2301 1760122 - 1760139 + r 79 -9.9 -2.91288 | opp_overlap 1760122, overlap 1760121 1760124 TATCAACTAAAAAAA GACATGC ATCA GCATGTC CTTTAATATAAATTA TERM 2302 1760139 - 1760122 - R 100 -9.9 -5.65513 | opp_overlap 1760122 1760121 1760124 TATCAACTAAAAAAA GACATGC ATCA GCATGTC CTTTAATATAAATTA pgk 1761360 - 1760164 - | phosphoglycerate kinase SAG1767 1762364 - 1761495 - | acid phosphatase TERM 2303 1762554 - 1762529 - R 100 -13.5 -4.87665 | opp_overlap 1762534, overlap 1762534 TTTTATTTATAAAAA TAAAAGAGGGA TAAA TCCCTCTTTTA CATCATATTAATTAA TERM 2304 1762534 - 1762549 + r 88 -9 -4.23723 | opp_overlap 1762529 1762534 TTTATAAAAATAAAA GAGGGA TAAA TCCCTC TTTTACATCATATTA TERM 2305 1762549 - 1762534 - R 100 -9 -5.35224 | opp_overlap 1762534, overlap 1762529 TTTATAAAAATAAAA GAGGGA TAAA TCCCTC TTTTACATCATATTA gap 1763583 - 1762573 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2306 1763767 - 1763750 - R 100 -6.3 -6.20267 | opp_overlap 1763750 TCAAAAAGAAAAAAA GATACTC TTTC GAGTACC TTTCATAAGTTTTCA fusA 1765865 - 1763787 - | elongation factor G TERM 2307 1765945 - 1765925 - R 100 -9.7 -5.28778 | opp_overlap 1765925 ACTATTTATAAAAAA CGGATAGGC AGG ACCTACCCG TTCTAATTGCTAACA rpsG 1766490 - 1766020 - | 30S ribosomal protein S7 rpsL 1766925 - 1766512 - | 30S ribosomal protein S12 TERM 2308 1767142 - 1767119 - R 89 -7.5 -4.93365 | opp_overlap 1767119 1767122 1767130 TTTTACAAGCAAAAA GAATCAAGG ATGTCA CCTTGACTC TTTAATCAAATATAT purR 1767956 - 1767144 - | purine operon repressor SAG1773 1768994 - 1768053 - | HD domain-containing protein SAG1774 1770258 - 1768984 - | hypothetical protein TERM 2309 1769851 - 1769861 + g 76 -3.2 -5.35222 | AGAAGTTTGCAAACG CGTT TGT AGCG TTTTTTCTAGCTTTT SAG1775 1770892 - 1770260 - | hypothetical protein TERM 2310 1770811 - 1770780 - G 87 -11.8 -3.57263 | overlap 1770784 ACTGCCATGTCCAAA GAAAGCCCATTTTT TAAT AAAAATAGGCTTCC ACGGTCAATTCCGAC TERM 2311 1770807 - 1770784 - G 90 -9 -4.42806 | overlap 1770780 CCATGTCCAAAGAAA GCCCATTTTT TAAT AAAAATAGGC TTCCACGGTCAATTC rpe 1771547 - 1770885 - | ribulose-phosphate 3-epimerase SAG1777 1772426 - 1771554 - | ribosome-associated GTPase TERM 2312 1772598 - 1772573 - R 79 -7 -4.66938 | gap 1, opp_overlap 1772573 1772572 ATTCCCAACATAAAA GCAGTG-ATCT TATTT AGATACACTGC GCTTTTTTCCAATTA SAG1778 1773433 - 1772582 - | rRNA (guanine-N1-)-methyltransferase, putative ksgA 1774309 - 1773437 - | dimethyladenosine transferase TERM 2313 1773756 - 1773736 - G 70 -2.5 -5.15167 | overlap 1773738 1773739 GAGCAGGAACAAAAA CAGTTCTCG GAA CGATAAATG ATACTTTGGCAGTCA SAG1780 1774880 - 1774389 - | hypothetical protein SAG1781 1775459 - 1774899 - | primase-related protein TERM 2314 1775439 - 1775449 + g 81 -4 -5.52986 | GACAACGATCACTTC TTGA ATA TCAA TTTTTTTCATCAAGT SAG1782 1776228 - 1775446 - | TatD family deoxyribonuclease TERM 2315 1775527 - 1775537 + g 78 -5.4 -5.00884 | overlap 1775516 1775512 CACAGTTATGCCTCG TAGC TCT GCTA TTTTTTCAACGACAT TERM 2316 1776349 - 1776328 - R 86 -5.9 -5.40004 | overlap 1776321 GAGTAAATCAAAAAA GTCAAAACA TTTT TGCTCTGAC TTTTGAATACTTGCT SAG1783 1776682 - 1776410 - | hypothetical protein SAG1784 1777093 - 1776701 - | hypothetical protein SAG1785 1778376 - 1777084 - | hypothetical protein TERM 2317 1777304 - 1777323 + g 70 -6.4 -4.15106 | opp_overlap 1777308 TGAGGACTTAGTTCA GTAACTCC TGTA GGAGCTAC TTTTAAAGATTGATA SAG1786 1778768 - 1778376 - | hypothetical protein TERM 2318 1778930 - 1778899 - R 95 -8.9 -5.28755 | AAAGATATTAAAAAA GATGATTAATAGC TCTAAT GCTATAAATCATC TGACTCTACTATTTA dltD 1780205 - 1778943 - | dltD protein dltC 1780437 - 1780198 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 1781717 - 1780452 - | dltB protein TERM 2319 1780800 - 1780790 - G 70 -5.4 -4.41494 | TATTTTTAACTAAAA GCTT AAC AAGC CTCATGAAAACAAAG dltA 1783249 - 1781714 - | D-alanine--D-alanyl carrier protein ligase SAG1791 1784582 - 1783395 - | sensor histidine kinase SAG1792 1785256 - 1784582 - | DNA-binding response regulator TERM 2320 1785208 - 1785225 + g 74 -4.1 -5.1861 | overlap 1785211 CTGCCAATAAAGCCT GAATAGC CTCT GCTATAC TTTTTTCATCCTCAA TERM 2321 1785588 - 1785563 - R 71 -3.2 -5.18357 | GAAGGTACCAAAAAA GCCACCAGAC TCGAGT ACCTGTTGGC TTGATATTATTTTGC rpmH 1785746 - 1785612 - | 50S ribosomal protein L34 TERM 2322 1785951 - 1785941 - R 80 -5.4 -5.18643 | CCAACTAAAAGAAAA GATG TGC CATC AAAACAATAATAGGT SAG1794 1787285 - 1785930 - | hypothetical protein SAG1795 1787517 - 1788683 + | IS30 family transposase TERM 2323 1788763 - 1788747 - T 71 -8.1 -3.1875 | opp_overlap 1788742 1788741, overlap 1788712 CATAGCGGAACTTAA TCTGAAA CGC TTTCAGA TGAGGATGTTTTCTT TERM 2324 1788837 - 1788871 + T 95 -8.6 -5.30199 | opp_overlap 1788837 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 2325 1788871 - 1788837 - T 70 -4.2 -4.94902 | opp_overlap 1788837 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 2326 1789016 - 1788998 - T 70 -6.2 -4.2828 | opp_overlap 1789001 TTTGATGTATTAAAA TAATATAA AAC TTATATTA AATAGCTAAAACGAC TERM 2327 1789050 - 1789069 + T 100 -7.2 -5.74122 | gap 1, opp_overlap 1789050 AGTCACATTAAAAAA CACG-CTCT AAA AGAGACGTG TTTTTTTCTATACTA TERM 2328 1789069 - 1789050 - T 91 -7.2 -5.22312 | gap 1, opp_overlap 1789050 AGTCACATTAAAAAA CACG-CTCT AAA AGAGACGTG TTTTTTTCTATACTA SAG1796 1790809 - 1789082 - | amino acid ABC transporter, permease protein SAG1797 1792051 - 1790828 - | amino acid ABC transporter, ATP-binding protein SAG1798 1792194 - 1792313 + | hypothetical protein TERM 2329 1792393 - 1792369 - T 83 -5.8 -5.12916 | overlap 1792364 TATAAAATAACAAAA CACCCTTAGA AAAAA TCTAAAAGTG TTTTTGTTTGTAAGT xfp 1794806 - 1792428 - | putative phosphoketolase TERM 2330 1794124 - 1794110 - G 81 -7.2 -4.62302 | opp_overlap 1794109 CAACATCTGCAAAAA TAGGTT TCC AACCTA ATCCTTCAAAAAACT TERM 2331 1794888 - 1794853 - R 74 -9.2 -3.1096 | overlap 1794860 AACATATTTTAAAAT TGAAAAACTGCATATC ATGC GACATACAGTCTCTCA TTAGCCATTATAGAA TERM 2332 1794881 - 1794860 - R 78 -5.9 -4.87318 | overlap 1794853 TTTAAAATTGAAAAA CTGCATATC ATGC GACATACAG TCTCTCATTAGCCAT SAG1800 1795987 - 1794896 - | putative L-ascorbate 6-phosphate lactonase TERM 2333 1796162 - 1796144 - R 72 -2.4 -5.4182 | AAGCACAAATAAAAA GTACTCCC ATT AAAAGTAC TAGCTTTCTCAACTT SAG1801 1797983 - 1796304 - | BglG family transcriptional antiterminator TERM 2334 1796927 - 1796909 - G 79 -3.2 -5.49569 | GATTAACAGAAAAAA TACCATAA CGT TTACGATA TAAGAGTGCCTTGCA SAG1802 1798810 - 1798049 - | hypothetical protein SAG1803 1800347 - 1798830 - | carbohydrate kinase TERM 2335 1799891 - 1799874 - G 81 -8.5 -4.23213 | CTTATACCGAATAAA GTCCTTT GCAG AAAGGAC CGCCCCTATTGATTT TERM 2336 1800403 - 1800377 - R 79 -6.6 -4.65895 | opp_overlap 1800384, overlap 1800378 1800380 TTGTTGATTTAAAAA GGAGGTACAAGA AAC TCTTGTACCTTG AAAACTCTTCTAATA TERM 2337 1800402 - 1800378 - R 84 -10.1 -3.39216 | opp_overlap 1800384, overlap 1800377 1800380 TGTTGATTTAAAAAG GAGGTACAAGA AAC TCTTGTACCTT GAAAACTCTTCTAAT TERM 2338 1800400 - 1800380 - R 100 -12.7 -3.26405 | opp_overlap 1800384, overlap 1800378 1800377 TTGATTTAAAAAGGA GGTACAAGA AAC TCTTGTACC TTGAAAACTCTTCTA SAG1804 1801402 - 1800413 - | hypothetical protein SAG1805 1802875 - 1801424 - | PTS system, IIC component, putative TERM 2339 1802937 - 1802926 - R 86 -5.8 -5.42259 | opp_overlap 1802926 TTACTCGTAAAAAAA TGGG AGGT CCCA TTTTTTCAAAAGATG TERM 2340 1802926 - 1802937 + r 80 -5.8 -5.0133 | opp_overlap 1802926 TTACTCGTAAAAAAA TGGG AGGT CCCA TTTTTTCAAAAGATG SAG1806 1803929 - 1802973 - | glyoxylate reductase, NADH-dependent TERM 2341 1803354 - 1803374 + g 72 -3.9 -4.99056 | AAGCTGATCAAATTC GAGATAGGT TAC ACCAAGCTC TTTTTCCTTATCTTC TERM 2342 1803645 - 1803665 + g 86 -5.5 -5.28942 | TCGTACTGCTTGAGG GGAATTAGA GAC TATAATTCC TTTTTCTTTAGCATA SAG1807 1804967 - 1803948 - | hypothetical protein TERM 2343 1805198 - 1805181 - R 93 -6.3 -5.60993 | opp_overlap 1805164 1805181 TTTTTTATAAAAAAA TGCTTGC TCTC GCAAACA TTTTTAAAAAGATTG SAG1808 1806185 - 1805202 - | LacI family sugar-binding transcriptional regulator TERM 2344 1806310 - 1806286 - R 77 -2.9 -5.70829 | AAGATTATAAAAAAA GACAAACCC ATTATCA AAGTTTGTC TTGCACTAGTATAAT SAG1809 1806996 - 1806349 - | putative translaldolase araD 1807723 - 1807007 - | L-ribulose-5-phosphate 4-epimerase SAG1811 1808588 - 1807725 - | putative L-xylulose 5-phosphate 3-epimerase ulaD 1809257 - 1808592 - | 3-keto-L-gulonate-6-phosphate decarboxylase SAG1813 1809855 - 1809370 - | PTS system, IIA component TERM 2345 1809883 - 1809908 + r 80 -7.5 -4.22414 | opp_overlap 1809882 1809880 1809883 AAAGTCTAAAGATAT GGGAGAGAAAC TTTT GTCTCACTCCC TTTGTCTATTAACTT TERM 2346 1809908 - 1809883 - R 74 -9.7 -2.56413 | opp_overlap 1809883, overlap 1809882 1809880 AAAGTCTAAAGATAT GGGAGAGAAAC TTTT GTCTCACTCCC TTTGTCTATTAACTT SAG1814 1810200 - 1809922 - | PTS system, IIB component ulaA 1811667 - 1810228 - | ascorbate-specific PTS system enzyme IIC TERM 2347 1811590 - 1811574 - G 71 -5.1 -4.63218 | GTTTCTTCAATAAAA GATACCC AAT GAGTACC AATAGACCTACGAAG TERM 2348 1811821 - 1811800 - R 90 -5.9 -5.66684 | opp_overlap 1811801, overlap 1811801 TAATTTACAAAAAAA TCATGTATC TTAG GATACATGT TTTTTTATATTTTTT TERM 2349 1811820 - 1811801 - R 86 -9.4 -3.98383 | opp_overlap 1811801, overlap 1811800 AATTTACAAAAAAAT CATGTATC TTAG GATACATG TTTTTTTATATTTTT TERM 2350 1811801 - 1811820 + r 100 -9.4 -5.9667 | opp_overlap 1811801 1811800 AATTTACAAAAAAAT CATGTATC TTAG GATACATG TTTTTTTATATTTTT SAG1816 1812452 - 1811835 - | hypothetical protein TERM 2351 1812019 - 1812032 + g 86 -5.3 -5.25805 | GGTAGTTGAACCCTA GCTAA AATA TTAGC TTTTTTGACTTTGTT SAG1817 1812611 - 1813084 + | hypothetical protein TERM 2352 1813111 - 1813065 - T 79 -3.3 -5.65496 | gap 1, opp_overlap 1813074 1813079, overlap 1813079 TATTAAAAAGAAAAA GTAAACATCAAAAAGTCTGACT GTAC AGTCAGAC-TTTTAATATTAAA TATTTGACCAAACAG TERM 2353 1813074 - 1813103 + T 82 -10.9 -2.50438 | opp_overlap 1813065 1813079, overlap 1813079 GAAAAAGTAAACATC AAAAAGTCTGACT GTAC AGTCAGACTTTTA ATATTAAATATTTGA TERM 2354 1813079 - 1813098 + T 100 -10.8 -4.43681 | opp_overlap 1813065 1813079, overlap 1813074 AGTAAACATCAAAAA GTCTGACT GTAC AGTCAGAC TTTTAATATTAAATA TERM 2355 1813098 - 1813079 - T 100 -10.8 -4.946 | opp_overlap 1813079 1813074, overlap 1813065 AGTAAACATCAAAAA GTCTGACT GTAC AGTCAGAC TTTTAATATTAAATA purA 1814399 - 1813107 - | adenylosuccinate synthetase TERM 2356 1813210 - 1813194 - G 73 -8.7 -3.4617 | opp_overlap 1813208 ACGAACACCAACCAA TTCGCCA ACA CGGCGAA CGTAATTACGTGCAT TERM 2357 1814685 - 1814656 - R 83 -4.5 -5.64873 | gap 1, opp_overlap 1814656, overlap 1814649 CTTAACAATAAAAAA TTCAACGA-TCT TTTTATT AGAGTCGTTGAA TTTTAAATTATCAAG pfoR 1815791 - 1814769 - | perfringolysin O regulator protein SAG1820 1816153 - 1816827 + | hypothetical protein TERM 2358 1816861 - 1816882 + F 100 -8.1 -5.49579 | opp_overlap 1816861 CTTATAGATTAATAA GATTGGACT CAAA AGTTCAATC TTTTATTTTTTATGA TERM 2359 1818971 - 1818951 - g 73 -3.3 -5.2204 | CAGAAGGAACAAAAA TAGAACTTC GCC GTAATTCTA ATATTTCCACTGGCG SAG1821 1816997 - 1819249 + | bifunctional glutamate--cysteine ligase/glutathione synthetase TERM 2360 1819260 - 1819282 + F 100 -11.4 -4.87291 | opp_overlap 1819259 1819257 1819260 TATAACTAAAAAGAG TTCCTTAGGC TAA GCTTAAGGAA TTTTTGGTTAAAATA TERM 2361 1819282 - 1819260 - f 74 -9.2 -3.04125 | opp_overlap 1819260, overlap 1819259 1819257 TATAACTAAAAAGAG TTCCTTAGGC TAA GCTTAAGGAA TTTTTGGTTAAAATA SAG1822 1819373 - 1820191 + | hypothetical protein TERM 2362 1820294 - 1820304 + G 82 -6.8 -5.0133 | CAACAAGCCAAACTG GGCA AAT TGCC TTTTTTGAAAAACTA TERM 2363 1820367 - 1820354 - g 70 -3.1 -5.02074 | CTATCTCTGAAAAAA CACCA GCTT TGGTA GATACTTTTGTCGGC SAG1823 1820188 - 1821444 + | hypothetical protein TERM 2364 1821462 - 1821504 + F 82 -10.9 -2.76265 | opp_overlap 1821472, overlap 1821472 TACTATCATATCCAC TAAATAAAAACGATACTGT AAAAC ACAGTATCGTTTTTATATC ATTAATTTATACCGT TERM 2365 1821494 - 1821472 - f 100 -11.4 -5.33405 | opp_overlap 1821462 1821472 TCCACTAAATAAAAA CGATACTGTA AAA CACAGTATCG TTTTTATATCATTAA TERM 2366 1821472 - 1821494 + F 100 -10.7 -5.04175 | opp_overlap 1821472, overlap 1821462 TCCACTAAATAAAAA CGATACTGT AAAAC ACAGTATCG TTTTTATATCATTAA hslO 1821584 - 1822459 + | Hsp33-like chaperonin SAG1825 1822443 - 1823420 + | NifR3/Smm1 family protein TERM 2367 1823442 - 1823429 - f 85 -6.7 -4.99134 | opp_overlap 1823429, overlap 1823423 ACGCTAAATCAAAAA CAGTC CTTT GACTG TTTTTTCCTATCTCT TERM 2368 1823429 - 1823442 + F 88 -6.7 -5.25893 | opp_overlap 1823429 1823423 ACGCTAAATCAAAAA CAGTC CTTT GACTG TTTTTTCCTATCTCT TERM 2369 1823752 - 1823742 - g 73 -6.8 -4.34789 | CAATCTATAAAAGAA GCCT ATA AGGC TAACAACAATGTTTT SAG1826 1823541 - 1824182 + | deoxynucleoside kinase family protein TERM 2370 1824489 - 1824479 - g 88 -5.4 -5.53991 | CACGTAGCAAAAAAA TTGG TAG CCAA CTATATGATACATTG pat 1824196 - 1824687 + | phosphinothricin N-acetyltransferase TERM 2371 1824835 - 1824864 + T 100 -13.1 -5.09762 | opp_overlap 1824835 1824840, overlap 1824840 TTCATAAATCTATAA GAAAATGTCCAAA ATAT TTTGGACGTTTTC TTTTTATATTAAAAT TERM 2372 1824864 - 1824835 - T 87 -10.9 -3.50047 | opp_overlap 1824835 1824840, overlap 1824840 TTCATAAATCTATAA GAAAATGTCCAAA ATAT TTTGGACGTTTTC TTTTTATATTAAAAT TERM 2373 1824840 - 1824859 + T 100 -7.2 -5.40873 | opp_overlap 1824835 1824840, overlap 1824835 AAATCTATAAGAAAA TGTCCAAA ATAT TTTGGACG TTTTCTTTTTATATT TERM 2374 1824859 - 1824840 - T 72 -5 -4.81863 | opp_overlap 1824840 1824835, overlap 1824835 AAATCTATAAGAAAA TGTCCAAA ATAT TTTGGACG TTTTCTTTTTATATT TERM 2375 1824877 - 1824904 + T 100 -11.4 -4.67635 | opp_overlap 1824879, overlap 1824879 TTCTTTTTATATTAA AATTCCAGTACC CATC GGTACTGGAATG TTTTATGATTTTGCA TERM 2376 1824879 - 1824902 + T 100 -14 -3.9392 | opp_overlap 1824879, overlap 1824877 CTTTTTATATTAAAA TTCCAGTACC CATC GGTACTGGAA TGTTTTATGATTTTG TERM 2377 1824902 - 1824879 - T 100 -14 -4.34402 | opp_overlap 1824879 1824877 CTTTTTATATTAAAA TTCCAGTACC CATC GGTACTGGAA TGTTTTATGATTTTG SAG1828 1827354 - 1824907 - | ATP-dependent Clp protease, ATP-binding subunit ctsR 1827815 - 1827351 - | transcriptional regulator CtsR SAG1830 1827988 - 1828449 + | hypothetical protein TERM 2378 1828459 - 1828478 + T 70 -4.2 -4.93696 | opp_overlap 1828459 TTCTAGAAAAGTTAA GGTGAGAT GACT GTCTCTCC TTTTTAATATTTGCC TERM 2379 1828517 - 1828546 + T 100 -12.3 -4.20074 | opp_overlap 1828517, overlap 1828520 AATTCGATAGCAAAA TAAGACACTTGAC TTAA GCCAAGTGTCTTA TTTTAAAATATATTT TERM 2380 1828546 - 1828517 - T 100 -14.5 -4.35518 | opp_overlap 1828517 1828520 AATTCGATAGCAAAA TAAGACACTTGAC TTAA GCCAAGTGTCTTA TTTTAAAATATATTT TERM 2381 1828520 - 1828543 + T 90 -9.6 -4.20817 | opp_overlap 1828517, overlap 1828517 TCGATAGCAAAATAA GACACTTGAC TTAA GCCAAGTGTC TTATTTTAAAATATA tsf 1829648 - 1828608 - | elongation factor Ts TERM 2382 1829715 - 1829688 - R 93 -6.3 -5.58074 | gap 1, opp_overlap 1829688 TAATGATTAAAAAAA CGAGACAGA-GC GGTTT GCATCTGCCCCG TTTTAGGATTTACAA rpsB 1830512 - 1829742 - | 30S ribosomal protein S2 ahpC 1830789 - 1831349 + | alkyl hydroperoxide reductase, subunit C ahpF 1831367 - 1832899 + | alkyl hydroperoxide reductase, subunit F TERM 2383 1832933 - 1832907 - T 100 -12.5 -4.37734 | opp_overlap 1832907 GACAATAATCTAAAA GAGATTGATAC AATGG GTATCAATCTC TTTTTTTGGGTAATA TERM 2384 1832907 - 1832933 + T 100 -12.5 -5.48825 | opp_overlap 1832907 GACAATAATCTAAAA GAGATTGATAC AATGG GTATCAATCTC TTTTTTTGGGTAATA TERM 2385 1833143 - 1833158 + T 72 -2.6 -5.46698 | gap 1, opp_overlap 1833143 TTAACCGAATGAAAA GCCTGAT TTT AT-AGGC TTTTTTGATTTTCCA TERM 2386 1833295 - 1833311 + T 74 -7.9 -3.79611 | opp_overlap 1833295, overlap 1833293 TTTATACAGAAAAAA GCGGCCA TCT TGACCGC TCTTTCTTATACTTG TERM 2387 1833311 - 1833295 - T 100 -10.1 -5.4251 | opp_overlap 1833293 1833295 TTTATACAGAAAAAA GCGGCCA TCT TGACCGC TCTTTCTTATACTTG TERM 2388 1833326 - 1833344 + T 71 -5.3 -4.57073 | CTCTTTCTTATACTT GCAATTC CTCAC GGATTGC TTTTTGCAACAGCTG SAG1835 1833722 - 1833318 - | hypothetical protein SAG1836 1833968 - 1833783 - | hypothetical protein TERM 2389 1833930 - 1833943 + g 73 -5.3 -4.66987 | AGTTTTACTAAAACC TTGCT TCTT AGCAA TTTTCTTAAGCTCTC TERM 2390 1834151 - 1834126 - R 83 -6.7 -4.78149 | opp_overlap 1834125 1834128, overlap 1834128 GTTATAACGGAAAAA CAGCCCCCGGC AATT GCTGAGGGCTT ATTTTGTCTTATCGT TERM 2391 1834128 - 1834149 + r 89 -9.3 -4.46621 | opp_overlap 1834128 1834126, overlap 1834125 TATAACGGAAAAACA GCCCCCGGC AATT GCTGAGGGC TTATTTTGTCTTATC TERM 2392 1834149 - 1834128 - R 85 -9.3 -4.00465 | opp_overlap 1834125 1834128, overlap 1834126 TATAACGGAAAAACA GCCCCCGGC AATT GCTGAGGGC TTATTTTGTCTTATC SAG1837 1835581 - 1834175 - | prophage LambdaSa2, lysin, putative TERM 2393 1834259 - 1834282 + g 89 -11 -3.90328 | GTCAATCTTGTCTTT GCTACCGTCA CCAA TGTCGGTAGC TTTATCAAACTTGTC TERM 2394 1834862 - 1834876 + g 78 -5.6 -5.03145 | overlap 1834846 CTCTTGAGCCTTAAA CGGCTC AGA GGGCTG TTTTTTGAGCAATTC SAG1838 1835914 - 1835585 - | prophage LambdaSa2, holin, putative SAG1839 1836327 - 1835917 - | hypothetical protein TERM 2395 1836108 - 1836078 - G 84 -7.7 -4.64657 | gap 1, opp_overlap 1836078 1836073 TCAAATCGTGAAAAA GACGGTAACGCT GGATTTTA AGCG-TACCGTC TTTTGTGATTTCTGA TERM 2396 1836078 - 1836108 + g 84 -7.7 -4.64846 | gap 1, opp_overlap 1836078, overlap 1836073 TCAAATCGTGAAAAA GACGGTAACGCT GGATTTTA AGCG-TACCGTC TTTTGTGATTTCTGA SAG1840 1836700 - 1836362 - | hypothetical protein SAG1841 1836933 - 1836703 - | hypothetical protein TERM 2397 1836894 - 1836910 + g 82 -10.9 -3.34232 | opp_overlap 1836887, overlap 1836891 TCAATTCATTGACCG TCAAGCG TAG CGCTTGA TTGAGTTGTTGTTCT SAG1842 1840624 - 1836950 - | prophage LambdaSa2, PblB, putative TERM 2398 1840632 - 1840619 - G 74 -4.5 -4.90266 | TGCATCAAGTAAAAA GAGCA ACTA TGCCC ACCCCCAAACTGTTT SAG1843 1841347 - 1840625 - | hypothetical protein TERM 2399 1841139 - 1841120 - G 81 -7.2 -4.60713 | opp_overlap 1841120 CAAAAGAGCAGAAAA GCGATAAA TTTC TTCATCGC TTGGCTCAATTAAAG TERM 2400 1841227 - 1841239 + g 72 -7.7 -3.65542 | overlap 1841224 CACTAATACCATCAT GCTCT AAT AGAGC TGTTTTGGAGCTGGA TERM 2401 1841319 - 1841337 + g 72 -3.9 -4.91511 | opp_overlap 1841301 GATGTTTTCACACCG TCAATGG TAAGT TCATTGA TTTTTGTCATGCCAT SAG1844 1844079 - 1841344 - | hypothetical protein TERM 2402 1842266 - 1842225 - G 76 -9.5 -3.40403 | overlap 1842226 TTGCTTGGATGATAA GTGTTATGACGGCAATAGC CCCT ACTATTGCCGCCACTACAA TTCCGACAGGCGCAC TERM 2403 1842265 - 1842226 - G 85 -13 -2.64099 | overlap 1842225 TGCTTGGATGATAAG TGTTATGACGGCAATAGC CCCT ACTATTGCCGCCACTACA ATTCCGACAGGCGCA TERM 2404 1843515 - 1843527 + g 84 -3.4 -5.72053 | overlap 1843512 1843512 CTATTTTCTCATCGC CAAG GGCAG CTTG TTTTTTCTTTAATTC SAG1845 1844226 - 1844098 - | hypothetical protein TERM 2405 1844252 - 1844283 + r 100 -8.8 -6.10295 | opp_overlap 1844253, overlap 1844253 AAGATAACCTTATAA ACCTTTTCGGAAGT TACA ACTTCTGAAGAGGC TTTTTTTTATCTTGC TERM 2406 1844282 - 1844253 - R 74 -7.9 -3.94381 | opp_overlap 1844252 1844253 AGATAACCTTATAAA CCTTTTCGGAAGT TACA ACTTCTGAAGAGG CTTTTTTTTATCTTG TERM 2407 1844253 - 1844282 + r 100 -12.3 -4.23737 | opp_overlap 1844253, overlap 1844252 AGATAACCTTATAAA CCTTTTCGGAAGT TACA ACTTCTGAAGAGG CTTTTTTTTATCTTG SAG1846 1844741 - 1844265 - | hypothetical protein TERM 2408 1844689 - 1844663 - G 91 -11.6 -4.00532 | opp_overlap 1844663, overlap 1844667 CTGGTAAAGAGTAAA GAAAGCGCACTG TTT CAGTGTGCTCTC TTTCTTCACCGTAAC TERM 2409 1844663 - 1844689 + g 91 -11.6 -4.16842 | opp_overlap 1844663 1844667 CTGGTAAAGAGTAAA GAAAGCGCACTG TTT CAGTGTGCTCTC TTTCTTCACCGTAAC TERM 2410 1844685 - 1844667 - G 90 -8.8 -4.59293 | opp_overlap 1844663, overlap 1844663 TAAAGAGTAAAGAAA GCGCACTG TTT CAGTGTGC TCTCTTTCTTCACCG SAG1847 1845424 - 1844741 - | hypothetical protein TERM 2411 1844974 - 1844988 + g 73 -8.6 -3.30214 | TTTCTTTTGGTGTCG CTGATG TTT CATCAG TTGATGTGCTGCCTT SAG1848 1845783 - 1845439 - | hypothetical protein SAG1849 1846117 - 1845770 - | hypothetical protein SAG1850 1846422 - 1846117 - | hypothetical protein SAG1851 1846754 - 1846419 - | hypothetical protein SAG1852 1848037 - 1846775 - | hypothetical protein TERM 2412 1847919 - 1847935 + g 79 -8.1 -4.04326 | overlap 1847928 1847930 TGTTCCAAGTCATCG TCTTCAA TGG TTGAAGA TTTCATCTTTGCTTC SAG1853 1848590 - 1848048 - | prophage LambdaSa2, protease, putative SAG1854 1849782 - 1848640 - | hypothetical protein SAG1855 1851503 - 1849791 - | prophage LambdaSa2, terminase large subunit, putative TERM 2413 1850365 - 1850347 - G 80 -11.8 -2.51462 | overlap 1850346 1850344 1850342 1850349 ATAAAAGAGATAGAG CAGATGTC ATT GACATCTG ACAAGTCAATCCCAA TERM 2414 1851080 - 1851068 - G 72 -7.7 -3.8186 | GACTGTAAGCAAGAA GCTGA ATA TCAGC ACCCCACTCACCGTC TERM 2415 1851187 - 1851166 - G 75 -8.7 -3.49568 | opp_overlap 1851166, overlap 1851164 CGAGGCACAATAATA GGCACCTCA TGAA TGAGACGCC TTTCTTCATAATCTG SAG1856 1851981 - 1851496 - | hypothetical protein SAG1857 1852428 - 1852069 - | prophage LambdaSa2, HNH endonuclease family protein TERM 2416 1852151 - 1852117 - G 78 -3.8 -5.31158 | opp_overlap 1852138 TAAAAAAATCAAAAA TAAATTTATATTCCGA TTA TCTAAATTTAAATTTA TTTTACTTTGAAAAG SAG1858 1852715 - 1852428 - | hypothetical protein TERM 2417 1852761 - 1852742 - R 90 -4.2 -6.09888 | CCCCAACAAAAAAAA GAACATGC CTAA GCTTGCTC TCTGGATTTTTCTCA SAG1859 1853547 - 1853005 - | prophage LambdaSa2, site-specific recombinase phage integrase family protein TERM 2418 1853599 - 1853572 - R 86 -5.7 -5.40072 | gap 1, overlap 1853576 CCTTTCTCAAAAAAA TAAAGCACCAAG GATTT CTCGGTGC-TTA GCGACACTATCAATC TERM 2419 1853596 - 1853576 - R 95 -9 -5.20328 | overlap 1853572 TCTCAAAAAAATAAA GCACCAAG GATTT CTCGGTGC TTAGCGACACTATCA TERM 2420 1853610 - 1853624 + r 74 -7.2 -4.10179 | opp_overlap 1853609, overlap 1853618 GCTTAGCGACACTAT CAATCT ATC AGATTG TTTCTGTCAATTCTA SAG1860 1854121 - 1853657 - | hypothetical protein TERM 2421 1853976 - 1853990 + g 84 -7.8 -4.67353 | CCTGAATCATCGATT CCTGGC ATT GTCAGG TTTTTGACTGCATAG SAG1861 1854477 - 1854118 - | prophage LambdaSa2, Cro/CI family transcriptional regulator TERM 2422 1854350 - 1854360 + g 71 -4.6 -4.79223 | ACCTGACCAATAGAT GGTG TAC CGCC TTTTTCATAATGTAG SAG1862 1854722 - 1854462 - | hypothetical protein ssb-4 1855148 - 1854732 - | prophage LambdaSa2, single-strand binding protein SAG1864 1855344 - 1855138 - | hypothetical protein SAG1865 1855565 - 1855341 - | hypothetical protein SAG1866 1856026 - 1855697 - | hypothetical protein SAG1867 1856517 - 1856026 - | hypothetical protein SAG1868 1856914 - 1856510 - | hypothetical protein SAG1869 1858224 - 1856911 - | prophage LambdaSa2, type II DNA modification methyltransferase, putative TERM 2423 1857323 - 1857340 + g 70 -5.7 -4.43307 | CCTTTTTTAGTGGCT TCTTTTA TCTT TAAAAGA TTGTTTTCTTGCCAA SAG1870 1859045 - 1858224 - | prophage LambdaSa2, DNA replication protein DnaC, putative TERM 2424 1859409 - 1859427 + r 74 -6 -4.55721 | overlap 1859419 ACTTAACCTAACCTG TGTCTCCA TTT TGGATACA TTTTGTATACAATTT SAG1872 1860372 - 1859770 - | hypothetical protein dnaC-1 1861705 - 1860374 - | prophage LambdaSa2, replicative DNA helicase TERM 2425 1861156 - 1861181 + g 82 -10.6 -3.61764 | opp_overlap 1861161, overlap 1861159 CATAAAATCCTGTTT CAATACCAGT GATTTG ACTGGTATTG TTTGAGCGTTCCTCA SAG1874 1861977 - 1861714 - | hypothetical protein SAG1875 1862240 - 1861956 - | hypothetical protein SAG1876 1862770 - 1862240 - | prophage LambdaSa2, HNH endonuclease family protein TERM 2426 1862804 - 1862821 + r 91 -7.7 -5.2696 | opp_overlap 1862804 TATCTTTATATATGA GCCTGAT TGCC GTCAGGC TTTTTTGCGTTTTAC TERM 2427 1862856 - 1862873 + r 70 -7.1 -3.63843 | overlap 1862855 CATAAGCGTTCATCT CCAAAAT TTTC ATTTTGG TATTTGTGCTTGGTT SAG1877 1863543 - 1862833 - | prophage LambdaSa2, antirepressor protein, putative TERM 2428 1862923 - 1862911 - G 72 -7.7 -3.71998 | opp_overlap 1862911 1862910 CATCCAGTAAGATAA TGCTG CTT CAGCA AATTTCTTTGGCAAC SAG1878 1863854 - 1863546 - | hypothetical protein SAG1879 1863816 - 1864286 + | hypothetical protein SAG1880 1864433 - 1864269 - | hypothetical protein TERM 2429 1864319 - 1864349 + g 100 -11.9 -5.46657 | AATCAAATGACTTCA GTTCGTGAGCTAG TTCTT CTAGCTCGCGGGC TTTTTTATTGAACTC SAG1881 1864570 - 1864415 - | hypothetical protein SAG1882 1864719 - 1865081 + | prophage LambdaSa2, repressor protein, putative TERM 2430 1865141 - 1865155 + G 74 -10 -2.75229 | overlap 1865132 1865131 ATTGTGCCTGTTCGA TGCCAG CGA CTGGCA TAGTTCGGGATTTTA TERM 2431 1865438 - 1865414 - g 73 -6.5 -4.18693 | AAAGTACAAATTAAA GACCATAGC TGATGAG GCTATGATC AAGGAAGAGTATTTG SAG1883 1865082 - 1865468 + | hypothetical protein SAG1884 1865521 - 1865925 + | hypothetical protein TERM 2432 1865969 - 1865933 - f 100 -7.4 -5.56573 | gap 1 AGAAATAAATAAAAA GCCCTACGCTC-AAC TTTGGACG GTCCGAGCGTAAGGC GAATCGTATAAGAAA TERM 2433 1865975 - 1866015 + F 76 -9.4 -3.1733 | gap 2, opp_overlap 1865986 1865987, overlap 1865984 1865986 AGCGTAAGGCGAATC GTATAAGAAAAG--TTGCCA ATC TGGCAAGTCTTTTCTTGTAC TCATTTTATCAGAAA TERM 2434 1866002 - 1865986 - f 72 -5.1 -4.78839 | opp_overlap 1865986 1865984 1865975, overlap 1865987 AATCGTATAAGAAAA GTTGCCA ATC TGGCAAG TCTTTTCTTGTACTC TERM 2435 1866001 - 1865987 - f 76 -8.6 -3.46219 | opp_overlap 1865986 1865984 1865975, overlap 1865986 ATCGTATAAGAAAAG TTGCCA ATC TGGCAA GTCTTTTCTTGTACT TERM 2436 1866637 - 1866654 + G 88 -7.7 -4.84761 | overlap 1866638 CACTCTTTACCTTCT TGCAGTC ACAG GACTGCG TTTTTCTGAGGCTAT TERM 2437 1866638 - 1866653 + G 75 -9 -3.50133 | overlap 1866637 ACTCTTTACCTTCTT GCAGTC ACAG GACTGC GTTTTTCTGAGGCTA SAG1885 1866047 - 1867117 + | prophage LambdaSa2, site-specific recombinase phage integrase family protein TERM 2438 1867166 - 1867151 - g 78 -5.4 -5.04356 | opp_overlap 1867151, overlap 1867145 CGAAACAACCAAAAA CCTTGA TAAA CCAAGG TTTTCAAATCCGTCT SAG1886 1867119 - 1867217 + | hypothetical protein TERM 2439 1867211 - 1867257 + T 72 -9.1 -2.67047 | gap 1, opp_overlap 1867213 1867225, overlap 1867225 AAAAGATTTTATCCA AAGATAACAAAAAA-TCAACGA TTGT TCGTTGATTTTTTTGTTATCAG AATTATTTTTTTAAA TERM 2440 1867255 - 1867213 - T 100 -16.1 -3.66646 | gap 1, opp_overlap 1867211 1867225, overlap 1867225 AAGATTTTATCCAAA GATAACAAAAAA-TCAACGA TTGT TCGTTGATTTTTTTGTTATC AGAATTATTTTTTTA TERM 2441 1867242 - 1867225 - T 100 -8.5 -5.66338 | opp_overlap 1867211 1867225, overlap 1867213 AAAGATAACAAAAAA TCAACGA TTGT TCGTTGA TTTTTTTGTTATCAG TERM 2442 1867225 - 1867242 + T 100 -8.5 -5.88565 | opp_overlap 1867225 1867213, overlap 1867211 AAAGATAACAAAAAA TCAACGA TTGT TCGTTGA TTTTTTTGTTATCAG SAG1887 1869329 - 1867260 - | Na+/H+ exchanger family protein TERM 2443 1869064 - 1869054 - G 73 -5.4 -4.59511 | AATAGCTGTTAAAAA TACC GTT GGTA AGATTAAGTAAAGAA SAG1888 1869567 - 1869331 - | hypothetical protein SAG1889 1869734 - 1870687 + | microcin immunity protein MccF, putative TERM 2444 1870724 - 1870693 - T 100 -8 -6.04419 | opp_overlap 1870695, overlap 1870695 AAAAGAATAAAAAAA TACTCCTGCTACTC ATCT GAGTAACGGGAGTT TATCATTTAGAGTTA TERM 2445 1870695 - 1870722 + T 91 -10.6 -4.14056 | opp_overlap 1870693 1870695 AAGAATAAAAAAATA CTCCTGCTACTC ATCT GAGTAACGGGAG TTTATCATTTAGAGT TERM 2446 1870722 - 1870695 - T 95 -10.6 -4.59954 | opp_overlap 1870695, overlap 1870693 AAGAATAAAAAAATA CTCCTGCTACTC ATCT GAGTAACGGGAG TTTATCATTTAGAGT pepO 1872632 - 1870737 - | endopeptidase O TERM 2447 1871691 - 1871702 + g 76 -2.2 -5.56673 | AGGTCCTGAAGCAAG GTAG TAAG CTGC TTTTTTCTTATCCAT SAG1891 1872780 - 1873763 + | Gfo/Idh/MocA family oxidoreductase TERM 2448 1873797 - 1873761 - T 100 -10.3 -5.34365 | opp_overlap 1873767 1873769, overlap 1873765 1873767 CCAGAAGAAGAAAAA TGAAGAGAGCTTGACAA TGA TTGTCAAGCCCTTTTTA GTTAATATACACTAC TERM 2449 1873793 - 1873765 - T 93 -11.1 -3.97836 | opp_overlap 1873767 1873769, overlap 1873761 1873767 AAGAAGAAAAATGAA GAGAGCTTGACAA TGA TTGTCAAGCCCTT TTTAGTTAATATACA TERM 2450 1873791 - 1873767 - T 100 -13.7 -3.54195 | opp_overlap 1873767 1873769, overlap 1873765 1873761 GAAGAAAAATGAAGA GAGCTTGACAA TGA TTGTCAAGCCC TTTTTAGTTAATATA TERM 2451 1873767 - 1873791 + T 100 -11.5 -4.91873 | opp_overlap 1873765 1873761 1873767, overlap 1873769 GAAGAAAAATGAAGA GAGCTTGACAA TGA TTGTCAAGCCC TTTTTAGTTAATATA TERM 2452 1873769 - 1873789 + T 95 -12.7 -2.71339 | opp_overlap 1873767 1873765 1873761, overlap 1873767 AGAAAAATGAAGAGA GCTTGACAA TGA TTGTCAAGC CCTTTTTAGTTAATA SAG1892 1874885 - 1873809 - | hypothetical protein SAG1893 1875048 - 1874869 - | hypothetical protein TERM 2453 1875313 - 1875300 - g 73 -3.1 -5.16132 | opp_overlap 1875300 GATATTAAAACAAAA CCAAC ACTG ATTGG TGATATTGAACTTTT SAG1894 1875084 - 1875728 + | cyclic nucleotide-binding domain-containing protein def 1875794 - 1876408 + | peptide deformylase TERM 2454 1876419 - 1876440 + T 100 -8.8 -5.45813 | opp_overlap 1876419 AATAAGGACAAATAA CCTAGAGA TAATTT TCTCTAGG TTTTATTTTTTAATA TERM 2455 1876440 - 1876419 - T 87 -8.8 -4.1774 | opp_overlap 1876419 AATAAGGACAAATAA CCTAGAGA TAATTT TCTCTAGG TTTTATTTTTTAATA regR 1877480 - 1876479 - | sugar-binding transcriptional regulator RegR SAG1897 1879464 - 1877560 - | hypothetical protein TERM 2456 1879049 - 1879038 - G 77 -3 -5.57054 | AATAATCTAAAAAAA TCAA AACT TTGA GCCATGACATGCAAC TERM 2457 1879525 - 1879498 - R 89 -7.8 -4.96848 | opp_overlap 1879498 CGTCCGATATAAAAA GGACTATGTCAT TGAT ATGTCATAATCC TTATTTATCAAAATT SAG1898 1880359 - 1879544 - | PTS system, IID component SAG1899 1881212 - 1880346 - | PTS system, IIC component TERM 2458 1880809 - 1880819 + g 81 -5.4 -5.18561 | CCTCGGAAATTACCT GCTT GCA AAGC TTTTTTAGCTGTTTC SAG1900 1881742 - 1881248 - | PTS system, IIB component SAG1901 1882993 - 1881797 - | glucuronyl hydrolase SAG1902 1883430 - 1882996 - | PTS system, IIA component TERM 2459 1883165 - 1883179 + g 83 -5.8 -5.08178 | GAAAGGTTCAAGCCC GATAAA ACT TTTATC TTTTTATCTGTATAT TERM 2460 1883493 - 1883504 + H 78 -2.2 -5.72118 | GCGCTTTCATTTTTA GGTG TCAA CATC TTTTTTATATTTTTT SAG1903 1883531 - 1883635 + | hypothetical protein SAG1904 1883708 - 1884520 + | gluconate 5-dehydrogenase TERM 2461 1885034 - 1885050 + G 70 -6.6 -4.08692 | AAAACAGATTACTTA CAGAGA TTTAC TCTCTG TTTTAAAAGAAATTG SAG1905 1884537 - 1885175 + | hypothetical protein TERM 2462 1885688 - 1885675 - g 70 -5.3 -4.40173 | GAAGCTAAAAAAAGA GAGAT AACA ATCTC CTTAGATCTCAATTT SAG1906 1885201 - 1886208 + | carbohydrate kinase eda-2 1886220 - 1886858 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2463 1888276 - 1888250 - g 78 -3.8 -5.25656 | overlap 1888251 AAAATGACCAAAAAA TTCTAGATTTAA TAG TTAAATCTGGAG CTAATAATCAAAACT SAG1908 1887919 - 1889418 + | hypothetical protein TERM 2464 1889494 - 1889527 + T 100 -12.6 -5.48054 | opp_overlap 1889494 TGAATATACTAAAAA CACTCCTACCTCTA TTTTAC TAGAAGTAGGAGTG TTTTTTCATTTTAGT TERM 2465 1889527 - 1889494 - T 100 -14.8 -4.87807 | opp_overlap 1889494 TGAATATACTAAAAA CACTCCTACCTCTA TTTTAC TAGAAGTAGGAGTG TTTTTTCATTTTAGT SAG1909 1890203 - 1889589 - | nitroreductase family protein SAG1910 1890761 - 1890336 - | MarR family transcriptional regulator TERM 2466 1890428 - 1890440 + g 100 -7.7 -5.66684 | opp_overlap 1890427 CTACACGTTTAATAT GCTCT GGT AGAGC TTTTTTTATCACTTC TERM 2467 1890886 - 1890855 - R 100 -16.2 -3.56836 | opp_overlap 1890858 1890861, overlap 1890858 1890861 AAAGCAGCTGGCAAA TAATAAGGTTGAGT AGTT ACTCAACCTTATTA CTTAGAAGAAATCAT TERM 2468 1890858 - 1890883 + r 100 -13.5 -3.33815 | opp_overlap 1890858 1890855 1890861, overlap 1890861 GCAGCTGGCAAATAA TAAGGTTGAGT AGTT ACTCAACCTTA TTACTTAGAAGAAAT TERM 2469 1890883 - 1890858 - R 100 -13.5 -3.91716 | opp_overlap 1890858 1890861, overlap 1890855 1890861 GCAGCTGGCAAATAA TAAGGTTGAGT AGTT ACTCAACCTTA TTACTTAGAAGAAAT TERM 2470 1890880 - 1890861 - R 93 -10.8 -4.08557 | opp_overlap 1890858 1890861, overlap 1890858 1890855 GCTGGCAAATAATAA GGTTGAGT AGTT ACTCAACC TTATTACTTAGAAGA TERM 2471 1890861 - 1890880 + r 90 -10.8 -3.81146 | opp_overlap 1890861 1890858 1890855, overlap 1890858 GCTGGCAAATAATAA GGTTGAGT AGTT ACTCAACC TTATTACTTAGAAGA polC 1895294 - 1890888 - | DNA polymerase III PolC TERM 2472 1895251 - 1895228 - G 76 -4.6 -5.23316 | CAGCAGACGAAAAAA CACTTGAATT CTTA ATTTCAAGCG GCATTTCAATCTGAT SAG1912 1896001 - 1895417 - | N-acetylmuramoyl-L-alanine amidase TERM 2473 1895888 - 1895900 + g 72 -7.7 -3.78785 | CGATGCACTAGTGAC TGTCG GTT CGACA TTATCATTTTTATAA proS 1897979 - 1896126 - | prolyl-tRNA synthetase TERM 2474 1896789 - 1896769 - G 75 -6.9 -4.28361 | overlap 1896772 TTAACTCCAGTAAAA TGATAACCA TCT TGGTTAGCA CCAGACACAGCATTA TERM 2475 1898012 - 1898040 + r 71 -7.7 -3.52063 | AATCAAAGTTGATTC TTTTTCAATTG AGAATTG CAATTGAAAAA TTCGTATTTCCTTTC SAG1914 1899330 - 1898071 - | membrane-associated zinc metalloprotease, putative TERM 2476 1898545 - 1898568 + g 93 -6.8 -5.94743 | overlap 1898546 CGTTTTCACCACCTC TTTGCTCTTA ATCT TAAGGGCAAG TTTTTGTTTTTTTTC TERM 2477 1898546 - 1898567 + g 79 -8.1 -4.11355 | overlap 1898545 GTTTTCACCACCTCT TTGCTCTTA ATCT TAAGGGCAA GTTTTTGTTTTTTTT cdsA 1900155 - 1899361 - | phosphatidate cytidylyltransferase uppS 1900922 - 1900170 - | undecaprenyl diphosphate synthase TERM 2478 1900785 - 1900811 + g 86 -9.4 -4.21787 | TTGAAGAGCATCCAT CCCCGCCTTATG TCC CATAACGCGTGG TTTTAAACGTTTTTT TERM 2479 1901079 - 1901059 - R 85 -6.9 -5.02715 | ACAGCAAACTAAAAA GACCAGA ACAATCA TCTGGTC CTACATATCTTATTC yajC 1901430 - 1901089 - | preprotein translocase subunit YajC SAG1918 1901851 - 1901507 - | hypothetical protein TERM 2480 1901917 - 1901905 - R 80 -7.7 -4.15565 | CCTATGATGGCAAAA CTTGC AAG GCAAG AGTAACAACGATCCT TERM 2481 1902006 - 1902032 + r 100 -11 -4.17523 | opp_overlap 1902012, overlap 1902012 TTAAATGACTCATCA AAAAAACTGAGC ATA GCTCAGTTTTTA TTTTACACCTTATTT TERM 2482 1902026 - 1902012 - R 100 -10 -5.53991 | opp_overlap 1902012 1902006 GACTCATCAAAAAAA CTGAGC ATA GCTCAG TTTTTATTTTACACC TERM 2483 1902012 - 1902026 + r 100 -10 -5.45802 | opp_overlap 1902012, overlap 1902006 GACTCATCAAAAAAA CTGAGC ATA GCTCAG TTTTTATTTTACACC SAG1919 1903205 - 1902042 - | malate oxidoreductase TERM 2484 1903002 - 1903014 + g 90 -4.1 -5.88471 | TGAACCATCACTCAC TACGG CTA CTGTA TTTTTTTTAGTCGTC SAG1920 1904567 - 1903230 - | CCS family citrate carrier protein TERM 2485 1904316 - 1904306 - G 70 -3.2 -4.89838 | CTAATAAAGATAAAA TAGC TGG GCCA CCGAAGTTTTTAAAA SAG1921 1904721 - 1906247 + | sensor histidine kinase SAG1922 1906249 - 1906938 + | response regulator TERM 2486 1906945 - 1906926 - T 100 -8.6 -6.22802 | opp_overlap 1906926 GCTTATAAAAAAAAA CTTAGGCC TGTA GACCTAAG TTTTTTTAATCTTCG TERM 2487 1906926 - 1906945 + T 93 -6.4 -5.63374 | opp_overlap 1906926 GCTTATAAAAAAAAA CTTAGGCC TGTA GACCTAAG TTTTTTTAATCTTCG galE 1907946 - 1906951 - | UDP-glucose 4-epimerase dexB 1909641 - 1908034 - | glucan 1,6-alpha-glucosidase TERM 2488 1909757 - 1909720 - R 93 -9.5 -4.56597 | gap 1, opp_overlap 1909731, overlap 1909722 1909725 1909731 GCGTTTGCGTAAAAA CATT-ATAAAAAGGCTGG AAC CCAACCTTTTTATGAATA TCGCTTATACCTTAA TERM 2489 1909754 - 1909722 - R 95 -11.5 -3.90048 | opp_overlap 1909731, overlap 1909720 1909725 1909731 GTTTGCGTAAAAACA TTATAAAAAGGCTGG AAC CCAACCTTTTTATGA ATATCGCTTATACCT TERM 2490 1909751 - 1909725 - R 100 -13.2 -3.01831 | opp_overlap 1909731, overlap 1909722 1909720 1909731 TGCGTAAAAACATTA TAAAAAGGCTGG AAC CCAACCTTTTTA TGAATATCGCTTATA TERM 2491 1909745 - 1909731 - R 89 -7.8 -5.02201 | opp_overlap 1909731, overlap 1909725 1909722 1909720 AAAACATTATAAAAA GGCTGG AAC CCAACC TTTTTATGAATATCG TERM 2492 1909731 - 1909745 + r 74 -5.6 -4.89852 | opp_overlap 1909731 1909725 1909722 1909720 AAAACATTATAAAAA GGCTGG AAC CCAACC TTTTTATGAATATCG SAG1925 1910902 - 1909769 - | sugar ABC transporter, ATP-binding protein TERM 2493 1909827 - 1909837 + g 72 -4 -4.92783 | opp_overlap 1909827 TTAGCAACATTAAAC GTTA GGT TAAC TTTTTCTCCTGGATT SAG1926 1911854 - 1911003 - | helix-turn-helix domain-containing protein TERM 2494 1911678 - 1911664 - G 71 -8.6 -3.1637 | AGATAGCGGTACCAA GGATTC TGA GAATCC ACTGAACTCGCATCT TERM 2495 1911936 - 1911920 - R 100 -10.9 -5.00895 | overlap 1911898 TTGAGCACAGAAAAA GAGGAGA ATG TCTCCTC AGAAAATTTCTGTTA SAG1927 1912845 - 1911949 - | lacX protein lacD 1913876 - 1912899 - | tagatose 1,6-diphosphate aldolase lacC 1914810 - 1913878 - | tagatose-6-phosphate kinase lacB 1915336 - 1914821 - | galactose-6-phosphate isomerase subunit LacB lacA 1915782 - 1915357 - | galactose-6-phosphate isomerase subunit LacA TERM 2496 1915635 - 1915655 + g 71 -9.1 -3.21395 | overlap 1915633 CTTCTTTTTGATTCA CTTTAGCAA CGA TTGCTAAGG TATTATCAACGAAAT SAG1932 1918480 - 1916030 - | neuraminidase-related protein TERM 2497 1916537 - 1916549 + g 74 -4.1 -5.22104 | TTTCAATTGAACGGG TACGG ATT CTGTA TTTTGTTCTTTTTTA TERM 2498 1917656 - 1917640 - G 71 -7.3 -3.94333 | opp_overlap 1917640 1917643, overlap 1917643 TATCAACACAGCAAA CAAGGCA GTG TGCCTTA GCTTTTAATTTTTGC TERM 2499 1917653 - 1917643 - G 70 -6.8 -4.086 | opp_overlap 1917640 1917643, overlap 1917640 CAACACAGCAAACAA GGCA GTG TGCC TTAGCTTTTAATTTT SAG1933 1920167 - 1918719 - | PTS system, IIC component, putative SAG1934 1920512 - 1920207 - | PTS system, IIB component, putative SAG1935 1920987 - 1920514 - | PTS system, IIA component, putative lacR-2 1921197 - 1921973 + | lactose phosphotransferase system repressor TERM 2500 1922031 - 1921979 - T 89 -8.8 -4.70169 | gap 2, opp_overlap 1921984, overlap 1921982 1921983 1921984 1921986 TTACATGTAATAAAA CAAGTGAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTCT-TTA TTTAGTGATTATAAC TERM 2501 1922029 - 1921982 - T 100 -10.8 -4.44914 | gap 1, opp_overlap 1921984, overlap 1921979 1921983 1921984 1921986 CATGTAATAAAACAA GTGAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTCTT TATTTAGTGATTATA TERM 2502 1922028 - 1921983 - T 100 -14.3 -3.25864 | gap 1, opp_overlap 1921984, overlap 1921982 1921979 1921984 1921986 ATGTAATAAAACAAG TGAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTCT TTATTTAGTGATTAT TERM 2503 1922027 - 1921984 - T 100 -17.8 -2.54434 | gap 1, opp_overlap 1921984, overlap 1921983 1921982 1921979 1921986 TGTAATAAAACAAGT GAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTC TTTATTTAGTGATTA TERM 2504 1921984 - 1922027 + T 100 -17.8 -4.53349 | gap 1, opp_overlap 1921984 1921983 1921982 1921979 1921986 TGTAATAAAACAAGT GAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTC TTTATTTAGTGATTA TERM 2505 1922025 - 1921986 - T 100 -14.6 -2.79659 | gap 1, opp_overlap 1921984, overlap 1921984 1921983 1921982 1921979 TAATAAAACAAGTGA GCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGC TCTTTATTTAGTGAT TERM 2506 1922228 - 1922184 - T 70 -8.3 -3.01918 | gap 1, opp_overlap 1922195 1922199 1922221 1922222, overlap 1922195 GCACGCTAGAAATCA TAACTAAAAAACAAACAAGT ACGGTG ACTTGTTTG-TTTTTAGTTG TCAGCTAAGTTTACT TERM 2507 1922218 - 1922195 - T 100 -8.3 -5.33848 | opp_overlap 1922195 1922199, overlap 1922184 ATCATAACTAAAAAA CAAACAAGT ACGGTG ACTTGTTTG TTTTTAGTTGTCAGC TERM 2508 1922195 - 1922218 + T 91 -8.3 -4.93365 | opp_overlap 1922195 1922184, overlap 1922199 ATCATAACTAAAAAA CAAACAAGT ACGGTG ACTTGTTTG TTTTTAGTTGTCAGC TERM 2509 1923070 - 1923051 - T 70 -8 -3.09516 | opp_overlap 1923050 1923051 1923053 1923069, overlap 1923053 1923069 GGGTGCATCATGTAA TATTTAGC CGTA GCTAAATA GTCTTCTAAAGAATA SAG1938 1925734 - 1924811 - | adhesion lipoprotein TERM 2510 1925640 - 1925621 - G 76 -6.4 -4.4195 | opp_overlap 1925620 1925621 ATATACTGGATAAAA GCTAGTCA CTAC TGACAAGC CATTTTTTTGCTGGC TERM 2511 1925979 - 1925957 - R 79 -4.8 -5.24416 | opp_overlap 1925973 GAACCACAATAAAAA GAGCCAAGCA TTC TGCCCAACTC TTTGGTTTTTTATTT TERM 2512 1925973 - 1925984 + r 87 -4.4 -5.88476 | opp_overlap 1925957 AGCCAAGCATTCTGC CCAA CTCT TTGG TTTTTTATTTATTTT SAG1939 1926432 - 1925989 - | D-tyrosyl-tRNA deacylase SAG1940 1928658 - 1926442 - | GTP pyrophosphokinase family protein cpdB 1928918 - 1931320 + | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein TERM 2513 1931371 - 1931316 - f 89 -7.8 -4.94811 | opp_overlap 1931334, overlap 1931320 TTAAAAAGAAACAAA TATAGTCATCACTAAAAACTGAGGCC AATC AACCTCAGTTTTTAGTCTCAACAATA GATTTTCTCTCTAAA TERM 2514 1931367 - 1931320 - f 76 -8.6 -3.5593 | opp_overlap 1931334, overlap 1931316 AAAGAAACAAATATA GTCATCACTAAAAACTGAGGCC AATC AACCTCAGTTTTTAGTCTCAAC AATAGATTTTCTCTC TERM 2515 1931334 - 1931353 + F 72 -5 -4.8048 | opp_overlap 1931320 1931316 AGTCATCACTAAAAA CTGAGG CCAATCAA CCTCAG TTTTTAGTCTCAACA nrdI-2 1931477 - 1931932 + | hypothetical protein SAG1943 1931943 - 1932980 + | hypothetical protein SAG1944 1932980 - 1933477 + | hypothetical protein TERM 2516 1933655 - 1933681 + T 100 -13.8 -5.12474 | opp_overlap 1933655 AAGACGACGATTAAA CTCCTCGGAATC AAT GATTCCAAGGAG TTTTTCTATATTCTC TERM 2517 1933681 - 1933655 - T 100 -16 -3.81689 | opp_overlap 1933655 AAGACGACGATTAAA CTCCTCGGAATC AAT GATTCCAAGGAG TTTTTCTATATTCTC SAG1945 1934736 - 1933699 - | iron ABC transporter, iron-binding protein SAG1946 1935521 - 1934748 - | DNA-binding response regulator SAG1947 1937174 - 1935525 - | hypothetical protein TERM 2518 1936260 - 1936290 + g 74 -4 -5.15634 | overlap 1936261 GGAAATGGCATCCAT ATCTAGCACCAT TTGATTT ATGGCGCTAGAA TTTTTTACTGCGATG TERM 2519 1936261 - 1936289 + g 72 -7.5 -3.68658 | overlap 1936260 GAAATGGCATCCATA TCTAGCACCAT TTGATTT ATGGCGCTAGA ATTTTTTACTGCGAT TERM 2520 1937293 - 1937258 - R 90 -4.1 -6.09196 | TTCAAAAGAAAAAAA GATAAGCTAAACAAG TATCGT CTTGTTCCACTTACC TTTAATGCTAGGAGA SAG1948 1938139 - 1937312 - | PTS system, IID component SAG1949 1938945 - 1938136 - | PTS system, IIC component SAG1950 1939452 - 1938961 - | PTS system, IIB component SAG1951 1939895 - 1939470 - | PTS system, IIA component, putative TERM 2521 1940100 - 1940072 - R 74 -3.1 -5.35721 | ACAGAACAATAAAAA GGTCATGTATCCT AAT AGTTTACACAACC TTTACATCACTATAA SAG1952 1941203 - 1940142 - | hypothetical protein TERM 2522 1941369 - 1941345 - g 88 -5.1 -5.68438 | TTAGGAAATAAAAAA GCTGATTTC GCAAAAG AAAATCAGC TTAGAATAATTTCTT SAG1953 1941228 - 1941410 + | hypothetical protein SAG1954 1942559 - 1941405 - | hypothetical protein SAG1955 1943413 - 1942565 - | ABC transporter, ATP-binding protein SAG1957 1944656 - 1943904 - | response regulator TERM 2523 1944877 - 1944917 + r 90 -8.4 -4.78237 | opp_overlap 1944879, overlap 1944879 AATTATTTCTATTAA AATACCCTTAGATACAGA CTTTA TCTGAACCTAAGGGTATC TTTTATTATAAGATA TERM 2524 1944879 - 1944915 + r 93 -11 -4.00512 | opp_overlap 1944879, overlap 1944877 TTATTTCTATTAAAA TACCCTTAGATACAGA CTTTA TCTGAACCTAAGGGTA TCTTTTATTATAAGA TERM 2525 1944915 - 1944879 - R 100 -13.9 -4.26076 | opp_overlap 1944879 1944877 TTATTTCTATTAAAA TACCCTTAGATACAGAC TTT ATCTGAACCTAAGGGTA TCTTTTATTATAAGA SAG1958 1945763 - 1944933 - | hypothetical protein SAG1959 1947985 - 1945802 - | PTS system, IIABC components TERM 2526 1948093 - 1948139 + r 72 -2.6 -5.42164 | gap 1, opp_overlap 1948105, overlap 1948100 1948105 ATATATTTTTTCTGA ATTACTAA-AAAAGTCTAGAT AATATC ATCTAGACTTTTATTTGTGAG TTTTTATTGTTTGTG TERM 2527 1948100 - 1948131 + r 77 -7.5 -4.10363 | opp_overlap 1948105, overlap 1948093 1948105 TTTTCTGAATTACTA AAAAAGTCTAGAT AATATC ATCTAGACTTTTA TTTGTGAGTTTTTAT TERM 2528 1948105 - 1948126 + r 88 -7.4 -5.01553 | opp_overlap 1948105, overlap 1948100 1948093 TGAATTACTAAAAAA GTCTAGAT AATATC ATCTAGAC TTTTATTTGTGAGTT TERM 2529 1948126 - 1948105 - R 93 -8.1 -5.2189 | opp_overlap 1948105 1948100 1948093 TGAATTACTAAAAAA GTCTAGATA ATAT CATCTAGAC TTTTATTTGTGAGTT SAG1960 1949798 - 1948143 - | sensor histidine kinase TERM 2530 1948268 - 1948316 + g 81 -4.2 -5.39755 | overlap 1948268 1948269 1948271 AACCAGTCCCCCCAA C-TATTTTTGAGCGACTTTTATCG ACG CGATAGAAA-CGTTCGAAAATACG TTTTTTGTCCTTCTC phoB 1950468 - 1949791 - | phosphate regulon response regulator PhoB SAG1962 1951124 - 1950468 - | phosphate transport system regulatory protein PhoU, putative SAG1963 1951882 - 1951121 - | phosphate ABC transporter, ATP-binding protein SAG1964 1952741 - 1951863 - | phosphate ABC transporter, permease protein SAG1965 1953588 - 1952743 - | phosphate ABC transporter, permease protein TERM 2531 1953567 - 1953530 - G 78 -9.9 -3.32966 | opp_overlap 1953529 1953562, overlap 1953528 ATAGCTGATATAACA CTGACGCAAGCCGTGAT GAAA AACACAGCTTGCATAAG ACCTTCTTTTGTTTG SAG1966 1954484 - 1953603 - | hemolysin precursor, putative SAG1967 1955272 - 1954685 - | hypothetical protein SAG1968 1956009 - 1955269 - | hypothetical protein TERM 2532 1955905 - 1955892 - G 80 -6.7 -4.77036 | opp_overlap 1955892 1955895 1955896, overlap 1955896 TGGCATCATCAAAAA CCAAG ACCA CTTGG TCATCTTCTGTCAAT prmA 1956962 - 1956009 - | ribosomal protein L11 methyltransferase SAG1970 1957267 - 1956959 - | hypothetical protein TERM 2533 1957328 - 1957345 + H 72 -4.9 -4.87893 | ATCGCCTTCAATTCT TATGAGG ATAC CTTCATA TTTTTCATTCCACTT SAG1971 1957329 - 1957454 + | hypothetical protein SAG1972 1957541 - 1958257 + | MerR family transcriptional regulator TERM 2534 1958265 - 1958290 + T 100 -9.2 -5.9218 | opp_overlap 1958270 GCCAATAAACTATCA GAAAACTAGA CAATCA TCTAGTTTTC TTTTTTTATTCTATC SAG1973 1958766 - 1958296 - | acetyltransferase SAG1974 1959196 - 1958738 - | MutT/nudix family protein TERM 2535 1958940 - 1958926 - GR 88 -7.2 -4.98255 | GTCCAACCATAAAAA CTGATA ATT TATCAG GCTTCAACATACCCC SAG1975 1959326 - 1959183 - | hypothetical protein SAG1976 1959802 - 1959332 - | hypothetical protein TERM 2536 1959886 - 1959896 + H 71 -5.4 -4.63863 | opp_overlap 1959886 CAGGTTAATCAAAAG GTAG TTC CTAC TTATTTTTATGTTAC SAG1977 1960129 - 1960620 + | acetyltransferase SAG1978 1960613 - 1961881 + | recombination factor protein RarA TERM 2537 1961904 - 1961920 + T 71 -8.1 -3.18268 | overlap 1961902 TTTTAAAAATCGCAA TCGATTT CAA AAATCGA TAATTTTGCTTGAAA TERM 2538 1962247 - 1962278 + T 73 -8.2 -3.50572 | opp_overlap 1962248 1962255, overlap 1962248 1962255 GGCATTAAACTATAC ATAAAAAAGCCTTT GATT AAAGGCTTTTTTGC TTGTCTAAAGTGGAT TERM 2539 1962248 - 1962277 + T 87 -11.7 -2.70022 | opp_overlap 1962248 1962255, overlap 1962247 1962255 GCATTAAACTATACA TAAAAAAGCCTTT GATT AAAGGCTTTTTTG CTTGTCTAAAGTGGA TERM 2540 1962277 - 1962248 - T 76 -9.5 -3.07227 | opp_overlap 1962248 1962247 1962255, overlap 1962255 GCATTAAACTATACA TAAAAAAGCCTTT GATT AAAGGCTTTTTTG CTTGTCTAAAGTGGA TERM 2541 1962270 - 1962255 - T 100 -7.6 -5.43414 | opp_overlap 1962255 1962248 1962247, overlap 1962248 ACTATACATAAAAAA GCCTTT GATT AAAGGC TTTTTTGCTTGTCTA TERM 2542 1962255 - 1962270 + T 100 -7.6 -5.35354 | opp_overlap 1962248 1962255, overlap 1962248 1962247 ACTATACATAAAAAA GCCTTT GATT AAAGGC TTTTTTGCTTGTCTA SAG1979 1963158 - 1962397 - | hypothetical protein SAG1980 1964057 - 1963155 - | ABC transporter, ATP-binding protein SAG1981 1964260 - 1964054 - | hypothetical protein SAG1982 1965329 - 1964250 - | Cro/CI family transcriptional regulator TERM 2543 1964826 - 1964843 + g 87 -2 -6.09888 | overlap 1964828 ACGATTCTGATAAAG TGCGAT AATATC ATCGTA TTTTTTTTGTTGAAA TERM 2544 1965205 - 1965219 + g 73 -6.4 -4.2354 | opp_overlap 1965203 ATCAAGTAATCGATA TCAGGT TTT GCCTGA TTGTTTTCCCATTTG TERM 2545 1965395 - 1965380 - H 70 -4 -5.00388 | TAAATGAAAAATAAA GTTCCT ATTT AGAAAC AATCCTAGTAAGAAG SAG1983 1965710 - 1966027 + | hypothetical protein SAG1984 1966024 - 1966590 + | hypothetical protein TERM 2546 1966592 - 1966629 + T 100 -13.1 -3.52093 | opp_overlap 1966592 1966596 1966601, overlap 1966596 1966601 AGTATAGCAATTAAA TAAAGAAAATAGCCA TTTATATT TGGCTATTTTCTTTA TTCTAGTTACCATGT TERM 2547 1966629 - 1966592 - T 100 -13.1 -3.98683 | opp_overlap 1966592 1966596 1966601, overlap 1966596 1966601 AGTATAGCAATTAAA TAAAGAAAATAGCCA TTTATATT TGGCTATTTTCTTTA TTCTAGTTACCATGT TERM 2548 1966625 - 1966596 - T 93 -9.5 -4.58308 | opp_overlap 1966592 1966596 1966601, overlap 1966592 1966601 TAGCAATTAAATAAA GAAAATAGCCA TTTATATT TGGCTATTTTC TTTATTCTAGTTACC TERM 2549 1966596 - 1966625 + T 91 -9.5 -4.3953 | opp_overlap 1966596 1966592 1966601, overlap 1966592 1966601 TAGCAATTAAATAAA GAAAATAGCCA TTTATATT TGGCTATTTTC TTTATTCTAGTTACC TERM 2550 1966620 - 1966601 - T 72 -3.6 -5.20222 | opp_overlap 1966596 1966592 1966601, overlap 1966596 1966592 ATTAAATAAAGAAAA TAGCCA TTTATATT TGGCTA TTTTCTTTATTCTAG TERM 2551 1966601 - 1966620 + T 72 -3.6 -5.14682 | opp_overlap 1966601 1966596 1966592, overlap 1966596 1966592 ATTAAATAAAGAAAA TAGCCA TTTATATT TGGCTA TTTTCTTTATTCTAG SAG1985 1966799 - 1966644 - | hypothetical protein SAG1986 1967952 - 1966825 - | phage integrase family site specific recombinase SAG1987 1968141 - 1967956 - | hypothetical protein TERM 2552 1968191 - 1968213 + r 100 -7 -5.60993 | GAATATTTTTTCTAT GTCGACTTCT TTC ACAAGTCGGC TTTTTTTATGCCCCA SAG1988 1969230 - 1968202 - | hypothetical protein SAG1989 1969652 - 1969233 - | hypothetical protein SAG1990 1970361 - 1969978 - | hypothetical protein TERM 2553 1970451 - 1970494 + H 100 -13 -3.80733 | opp_overlap 1970456 1970478, overlap 1970449 1970456 TAGCATTACCACCTA TATAATATATTTATACCTTA TTAA TAAGATATAAATATATTATA TTCTTATCCAATCAA TERM 2554 1970489 - 1970456 - H 85 -10.7 -3.52896 | opp_overlap 1970449 1970451 1970456, overlap 1970478 TTACCACCTATATAA TATATTTATACCTTA TTAA TAAGATATAAATATA TTATATTCTTATCCA TERM 2555 1970456 - 1970489 + H 79 -8.5 -3.87364 | opp_overlap 1970456 1970478, overlap 1970449 1970451 TTACCACCTATATAA TATATTTATACCTTA TTAA TAAGATATAAATATA TTATATTCTTATCCA TERM 2556 1970547 - 1970514 - H 84 -6.2 -5.28481 | TATCCAATCAAAAAA TCAAGATAAAACTT GCAAAA AAGTTATATCCTGA TAAAATAAATTATAT SAG1991 1970585 - 1971199 + | Cro/CI family transcriptional regulator TERM 2557 1971336 - 1971363 + T 100 -7 -5.68438 | gap 1, opp_overlap 1971336 CGTCGTCCAAAAAAA GTCCC-TCATTGC ATA GCAGTGTTGGGAC TTTTTTATTTAGTAA TERM 2558 1971363 - 1971336 - T 82 -4.8 -5.40072 | gap 1, opp_overlap 1971336 CGTCGTCCAAAAAAA GTCCC-TCATTGC ATA GCAGTGTTGGGAC TTTTTTATTTAGTAA SAG1992 1972928 - 1971372 - | hypothetical protein TERM 2559 1971767 - 1971784 + g 71 -4.9 -4.62441 | opp_overlap 1971767 1971771, overlap 1971771 CAATAAATCGAATAA CAATTTC CTGA GGAATTG TTTCTTTATCTAGAA TERM 2560 1971771 - 1971781 + g 70 -5.4 -4.41158 | opp_overlap 1971767 1971771, overlap 1971767 AAATCGAATAACAAT TTCC TGA GGAA TTGTTTCTTTATCTA TERM 2561 1973199 - 1973213 + r 85 -2.8 -6.11392 | opp_overlap 1973199 TAATATTGTCAAAAA CCTTGA TTT TAAAGG TTTTTTTCTTTGTTT SAG1993 1974390 - 1973269 - | phage integrase family site specific recombinase SAG1994 1974766 - 1974440 - | hypothetical protein SAG1995 1975591 - 1974959 - | hypothetical protein TERM 2562 1975099 - 1975122 + g 70 -2.6 -5.21709 | gap 1, overlap 1975102 ATATTTCATCATTTT TAGGTTGATTT GAT AAATCGAC-TA TTTTTTCCTCTAAAG TERM 2563 1975102 - 1975120 + g 73 -6.8 -4.23988 | overlap 1975099 TTTCATCATTTTTAG GTTGATTT GAT AAATCGAC TATTTTTTCCTCTAA TERM 2564 1975665 - 1975646 - R 91 -7.9 -5.28481 | opp_overlap 1975645 1975646 TATTTAATTAAAAAA GCCATGA AATTAA TCATGGC ATTATCTTATTTTTC SAG1996 1976463 - 1975672 - | cell wall surface anchor family protein, putative SAG1997 1977028 - 1976480 - | hypothetical protein SAG1998 1978401 - 1977028 - | hypothetical protein TERM 2565 1978399 - 1978379 - G 91 -6.2 -5.61689 | AAAACCAATAAAAAA GGAAATAC AATCA GTATTCCC AAACAGCCTAATTTT SAG1999 1978564 - 1978707 + | hypothetical protein TERM 2566 1978783 - 1978803 + T 100 -10.5 -5.29846 | opp_overlap 1978786, overlap 1978776 AAACGGTTCTGCTAA GCAGTTGTT AGA AGCAACTGC TTTTTATTTACAATT SAG2000 1980897 - 1978897 - | hypothetical protein TERM 2567 1979850 - 1979837 - G 74 -3.7 -5.10029 | overlap 1979827 ATCAAGGTTAAAAAA CCAGC TAAG GCAGG AAAGGAAACAGCCCC TERM 2568 1980317 - 1980333 + g 80 -5.9 -5.03405 | opp_overlap 1980317 1980320 GTTTTCATCACATAA TTATCAG CTA CTGATGA TTTTTGTGTGATCTT SAG2001 1983183 - 1980913 - | conjugal transfer protein, interruption-C SAG2002 1983619 - 1983230 - | IS1381 transposase protein B SAG2003 1984035 - 1983652 - | IS1381 transposase protein A SAG2005 1984706 - 1984296 - | hypothetical protein SAG2006 1984983 - 1984717 - | hypothetical protein SAG2007 1985957 - 1985004 - | hypothetical protein TERM 2569 1986007 - 1985984 - R 91 -5.3 -5.86976 | CTATAAAATAAAAAA GCAGTCACT TTTTTT AGCGACTAC TTCTACTTATAATGA SAG2008 1986264 - 1986010 - | hypothetical protein SAG2009 1986523 - 1986257 - | hypothetical protein SAG2010 1987141 - 1986668 - | hypothetical protein TERM 2570 1987041 - 1987009 - G 73 -6.6 -4.2928 | gap 1, opp_overlap 1987010 1987016, overlap 1987016 CAGAAAAACCACAAA TA-AAAAAGGCATCA TCCT TAATGCCTTTTTCTA TCATACGGTTTCTTA TERM 2571 1987033 - 1987016 - G 91 -6.3 -5.73978 | opp_overlap 1987010 1987016, overlap 1987009 ACCACAAATAAAAAA GGCATCA TCCT TAATGCC TTTTTCTATCATACG TERM 2572 1987016 - 1987033 + g 72 -4.1 -5.00895 | opp_overlap 1987016 1987009, overlap 1987010 ACCACAAATAAAAAA GGCATCA TCCT TAATGCC TTTTTCTATCATACG SAG2011 1987631 - 1987149 - | hypothetical protein TERM 2573 1987678 - 1987656 - R 93 -8.4 -5.26875 | overlap 1987657 TCCTTAATTAAAAAA GGAGCAAGCC ATT GACTTGCTCT CACCCTTAATGAAAT TERM 2574 1987677 - 1987657 - R 95 -11.9 -3.75402 | overlap 1987656 CCTTAATTAAAAAAG GAGCAAGCC ATT GACTTGCTC TCACCCTTAATGAAA SAG2012 1987956 - 1987684 - | hypothetical protein TERM 2575 1988067 - 1988048 - R 100 -7.2 -5.64274 | opp_overlap 1988048 TCACCCACAAAAAAA GAACTCCT ATAA AGAAGTTC TAATTACTCATATAT SAG2013 1988660 - 1988091 - | hypothetical protein SAG2014 1990012 - 1988663 - | hypothetical protein TERM 2576 1990074 - 1990055 - R 70 -8 -3.06696 | overlap 1990062 TTTGTTTTTAACATA TGTACAAT ACAA ATTGTACA CCACTTTACTAAAAA SAG2015 1990508 - 1990209 - | Cro/CI family transcriptional regulator TERM 2577 1990433 - 1990451 + g 100 -8.2 -6.23545 | TATTTAATTTAGACG CTAGCTCA GTT TGAGTTAG TTTTTTTTCTTTACG SAG2016 1990869 - 1990492 - | hypothetical protein SAG2017 1992174 - 1990885 - | Cro/CI family transcriptional regulator TERM 2578 1991609 - 1991629 + g 75 -7 -4.21631 | TCAAAACGTGTCACA TTCATATC ATCAC GATATGAA TTTCTTAGATAACTT TERM 2579 1992082 - 1992093 + g 77 -3 -5.47821 | TTGTTTTAGACCTGT TTTC TTTC GAAA TTTTTTTAAATAGAT SAG2018 1994066 - 1992405 - | FtsK/SpoIIIE family protein TERM 2580 1994088 - 1994054 - G 90 -3.9 -5.8901 | gap 2, opp_overlap 1994054 1994063 1994064 ATAGAAAAGAAAAAA GGTAATAACTCATATAC CTC ATATATG-GTT-TTACC TTAATCCCTCTATAT SAG2019 1994604 - 1994143 - | hypothetical protein TERM 2581 1994341 - 1994359 + g 81 -9 -4.10161 | opp_overlap 1994340 1994341 AGGCATATCAGTAAT TGAAACAA AAA TTGTTTCA TTTTGAGCAGTACTA SAG2020 1994922 - 1994626 - | hypothetical protein TERM 2582 1994809 - 1994826 + g 74 -4.1 -5.12707 | opp_overlap 1994809, overlap 1994811 TTCATTAAACAAAAT GTGTCTT GTAT AAGACCC TTTTTTACCATTTAA TERM 2583 1994943 - 1994970 + r 77 -10 -2.56773 | opp_overlap 1994926 1994943 1994946, overlap 1994940 1994935 1994949 CCTCTTTTCTAAAAA TAAGAAGCACTT TTTC AAGTGCTTCTGA ATATTGACTTTTTAA TERM 2584 1994970 - 1994943 - R 93 -10 -4.56597 | opp_overlap 1994943 1994940 1994935 1994949, overlap 1994926 1994946 CCTCTTTTCTAAAAA TAAGAAGCACTT TTTC AAGTGCTTCTGA ATATTGACTTTTTAA TERM 2585 1994967 - 1994946 - R 100 -11.7 -4.40561 | opp_overlap 1994943 1994940 1994935 1994949, overlap 1994926 1994943 CTTTTCTAAAAATAA GAAGCACTT TTTC AAGTGCTTC TGAATATTGACTTTT TERM 2586 1994949 - 1994964 + r 71 -7.6 -3.4277 | opp_overlap 1994946 1994943, overlap 1994943 1994940 1994935 TTCTAAAAATAAGAA GCACTT TTTC AAGTGC TTCTGAATATTGACT SAG2021 1997462 - 1994982 - | cell wall surface anchor family protein TERM 2587 1996282 - 1996292 + g 70 -3.2 -4.98255 | GGCTCAACTGGTTTT TCAG GTA CTGG TTTTTCTGCTTCAGG TERM 2588 1997347 - 1997321 - G 71 -8.8 -3.21099 | opp_overlap 1997323 1997335, overlap 1997322 1997341 TTGTCGCATGATTAA CTGCAGCTGT GGTTGTA ACAGCTACAG CTGCTTTTTTAGCTG TERM 2589 1997323 - 1997351 + g 100 -16.1 -5.1287 | opp_overlap 1997321 1997322 1997341, overlap 1997335 GTCGCATGATTAACT GCAGCTGTGGTTG TAA CAGCTACAGCTGC TTTTTTAGCTGTAGC TERM 2590 1997366 - 1997341 - G 70 -9.1 -3.01712 | opp_overlap 1997323 1997335, overlap 1997321 1997322 GCTGTGGTTGTAACA GCTACAGCT GCTTTTTT AGCTGTAGC TACTGCTTTATCAAG SAG2022 1998720 - 1997467 - | ISL3 family transposase TERM 2591 1998550 - 1998526 - G 90 -12.9 -3.27704 | opp_overlap 1998546 ACGGTTCAAATGTAA GCCCACTCGCT TTA AACGAATGGGC AAATCCATAATTAGT merA-2 2000520 - 1998880 - | mercuric reductase merR-2 2000941 - 2000549 - | mercuric resistance operon regulatory protein MerR TERM 2592 2000988 - 2000969 - H 82 -8.6 -4.06384 | CCTGAATATTATAAA CCATGTAC CATA GTACACGG TCAAGTAAATTGGAC TERM 2593 2001686 - 2001664 - g 84 -3.5 -5.66684 | opp_overlap 2001667, overlap 2001665 GAATCTACAAAAAAA TGATAAAAC AAATA GTTTTATCC ATTATGCAAACGGTC TERM 2594 2001685 - 2001665 - g 71 -7 -3.98383 | opp_overlap 2001667, overlap 2001664 AATCTACAAAAAAAT GATAAAAC AAATA GTTTTATC CATTATGCAAACGGT SAG2025 2001647 - 2003215 + | Mn2+/Fe2+ transporter TERM 2595 2003237 - 2003285 + T 82 -6.3 -5.02074 | opp_overlap 2003244 2003246 2003251, overlap 2003246 2003251 AAACTAGGTAGCCTC AAGTAAAGATAAAAGTAGTAGAA TAA TTCTACTACTTTTATTGATATTA TTTTTTAAGAAGTCA TERM 2596 2003278 - 2003244 - T 100 -13.2 -3.91084 | opp_overlap 2003237 2003246 2003251, overlap 2003246 2003251 GTAGCCTCAAGTAAA GATAAAAGTAGTAGAA TAA TTCTACTACTTTTATT GATATTATTTTTTAA TERM 2597 2003246 - 2003276 + T 100 -15.8 -3.57601 | opp_overlap 2003244 2003246 2003251, overlap 2003237 2003251 AGCCTCAAGTAAAGA TAAAAGTAGTAGAA TAA TTCTACTACTTTTA TTGATATTATTTTTT TERM 2598 2003276 - 2003246 - T 100 -15.8 -3.54414 | opp_overlap 2003246 2003237 2003251, overlap 2003244 2003251 AGCCTCAAGTAAAGA TAAAAGTAGTAGAA TAA TTCTACTACTTTTA TTGATATTATTTTTT TERM 2599 2003251 - 2003271 + T 100 -11.3 -4.79657 | opp_overlap 2003246 2003244 2003251, overlap 2003246 2003237 CAAGTAAAGATAAAA GTAGTAGAA TAA TTCTACTAC TTTTATTGATATTAT TERM 2600 2003271 - 2003251 - T 100 -11.3 -4.84539 | opp_overlap 2003251 2003246 2003237, overlap 2003246 2003244 CAAGTAAAGATAAAA GTAGTAGAA TAA TTCTACTAC TTTTATTGATATTAT TERM 2601 2003655 - 2003670 + T 78 -6.8 -4.46404 | opp_overlap 2003655, overlap 2003650 AACTCAACAAAAAAA GCCCTA GGGA TGGGGC TTTTAGTGTTCCTTG TERM 2602 2003670 - 2003655 - T 87 -4.6 -5.83226 | opp_overlap 2003655 2003650 AACTCAACAAAAAAA GCCCTA GGGA TGGGGC TTTTAGTGTTCCTTG SAG2026 2004505 - 2003783 - | hypothetical protein SAG2027 2005126 - 2004509 - | ABC transporter, ATP-binding protein SAG2028 2005294 - 2005184 - | hypothetical protein TERM 2603 2005688 - 2005661 - R 77 -8.6 -3.65782 | opp_overlap 2005667, overlap 2005667 CATTAAACTACATAA GAAAAAGCCTTT ATTT AAAGGCTTTTTT GCTTGACAGAAGAGG TERM 2604 2005667 - 2005682 + r 91 -7.6 -5.26875 | opp_overlap 2005661 2005667 ACTACATAAGAAAAA GCCTTT ATTT AAAGGC TTTTTTGCTTGACAG TERM 2605 2005682 - 2005667 - R 91 -7.6 -5.25699 | opp_overlap 2005667, overlap 2005661 ACTACATAAGAAAAA GCCTTT ATTT AAAGGC TTTTTTGCTTGACAG SAG2029 2006667 - 2005813 - | streptomycin resistance protein SAG2030 2007238 - 2006846 - | hypothetical protein SAG2031 2008281 - 2007673 - | hypothetical protein TERM 2606 2008130 - 2008140 + g 88 -5.4 -5.4433 | AAATCCATTTTTATT GACA TCT TGTC TTTTTCTTTATCTCT SAG2032 2008603 - 2008268 - | hypothetical protein TERM 2607 2008943 - 2008899 - R 71 -6.6 -4.11371 | opp_overlap 2008903, overlap 2008903 2008906 CAATAGTTTTTAAAA TTAATAATAGAGACTAGAGT TCATC ACTCTGGCCTCTATTATTTT TTATTCAATTTATAT TERM 2608 2008939 - 2008903 - R 95 -11.8 -3.67175 | opp_overlap 2008903, overlap 2008899 2008906 AGTTTTTAAAATTAA TAATAGAGACTAGAGT TCATC ACTCTGGCCTCTATTA TTTTTTATTCAATTT TERM 2609 2008903 - 2008939 + r 100 -11.8 -5.52096 | opp_overlap 2008903 2008899 2008906 AGTTTTTAAAATTAA TAATAGAGACTAGAGT TCATC ACTCTGGCCTCTATTA TTTTTTATTCAATTT TERM 2610 2008936 - 2008906 - R 85 -9.1 -3.965 | opp_overlap 2008903, overlap 2008903 2008899 TTTTAAAATTAATAA TAGAGACTAGAGT TCATC ACTCTGGCCTCTA TTATTTTTTATTCAA SAG2033 2009613 - 2009125 - | acetyltransferase SAG2034 2010525 - 2009782 - | hypothetical protein SAG2035 2011442 - 2010540 - | ABC transporter, ATP-binding protein SAG2036 2011645 - 2011439 - | hypothetical protein SAG2037 2012723 - 2011647 - | Cro/CI family transcriptional regulator TERM 2611 2011867 - 2011886 + g 73 -6.6 -4.23999 | opp_overlap 2011866 2011878 2011879, overlap 2011854 2011863 2011878 AATCTTTGGAGCAAT TGTTTTAA AGAT TTAAAACA TTGTTTTAAGTATCC TERM 2612 2012789 - 2012775 - R 72 -2.8 -5.36689 | opp_overlap 2012775, overlap 2012776 AAATCAAAAATAAAA GTTCCT ATC AGGAAA TATAATATAAAAAAG TERM 2613 2012820 - 2012804 - R 79 -3.7 -5.53436 | opp_overlap 2012804 2012816, overlap 2012816 ATATAATATAAAAAA GTTTCCC TAG AAGAAAC TTTTTCGTTGATTAA TERM 2614 2012958 - 2012910 - R 100 -20.1 -4.65895 | opp_overlap 2012913 2012917 2012925, overlap 2012893 2012913 TTTGTCATTGAAAAA TAATGAATTATAAAAGAGCCCTT AAG AAAGGCTCTTTTATAATTCATTG GTAACTACTATTTTT TERM 2615 2012913 - 2012955 + r 100 -19.6 -3.20207 | opp_overlap 2012910 2012913, overlap 2012917 2012925 GTCATTGAAAAATAA TGAATTATAAAAGAGCCCTT AAG AAAGGCTCTTTTATAATTCA TTGGTAACTACTATT TERM 2616 2012955 - 2012913 - R 100 -21.8 -4.44608 | opp_overlap 2012913 2012917 2012925, overlap 2012910 GTCATTGAAAAATAA TGAATTATAAAAGAGCCCTT AAG AAAGGCTCTTTTATAATTCA TTGGTAACTACTATT TERM 2617 2012917 - 2012951 + r 100 -14.6 -3.40867 | opp_overlap 2012913 2012910, overlap 2012913 2012925 TTGAAAAATAATGAA TTATAAAAGAGCCCTT AAG AAAGGCTCTTTTATAA TTCATTGGTAACTAC TERM 2618 2012925 - 2012943 + r 80 -7.4 -4.58213 | opp_overlap 2012913 2012910, overlap 2012917 2012913 TAATGAATTATAAAA GAGCCCTT AAG AAAGGCTC TTTTATAATTCATTG SAG2038 2013586 - 2012972 - | PAP2 family protein SAG2039 2013800 - 2014096 + | hypothetical protein SAG2040 2014113 - 2014673 + | hypothetical protein TERM 2619 2014684 - 2014712 + F 76 -5.4 -5.00884 | opp_overlap 2014687, overlap 2014687 ACTAGATTGATAAAA AAAGGAAGTTTC TAATT GAAATTTCCTTC TTTTTTCGAAGCGAT TERM 2620 2014709 - 2014687 - f 85 -4.9 -5.65177 | opp_overlap 2014684 2014687 AGATTGATAAAAAAA GGAAGTTTC TAATT GAAATTTCC TTCTTTTTTCGAAGC TERM 2621 2014687 - 2014709 + F 80 -7.1 -4.61482 | opp_overlap 2014687, overlap 2014684 AGATTGATAAAAAAA GGAAGTTTC TAATT GAAATTTCC TTCTTTTTTCGAAGC SAG2041 2014978 - 2015841 + | protease, putative TERM 2622 2015860 - 2015915 + T 100 -11.7 -4.36903 | gap 1, opp_overlap 2015865, overlap 2015865 CAAGCCACAAGACAC AAAAAGTATG-GTTTTGAAAAGGA TAATCATCC TCCTTTTCAAAACACATACTTTTC TTTATGTTTACTAAA TERM 2623 2015910 - 2015865 - T 100 -13.7 -5.12474 | gap 1, opp_overlap 2015865 2015860 CACAAGACACAAAAA GTATG-GTTTTGAAAAGGATAA TCA TCCTCCTTTTCAAAACACATAC TTTTCTTTATGTTTA TERM 2624 2015865 - 2015910 + T 100 -11.6 -5.13648 | gap 1, opp_overlap 2015865, overlap 2015860 CACAAGACACAAAAA GTATG-GTTTTGAAAAGGA TAATCATCC TCCTTTTCAAAACACATAC TTTTCTTTATGTTTA SAG2042 2016300 - 2015998 - | rhodanese-like domain-containing protein cfb 2017240 - 2016473 - | cAMP factor TERM 2625 2016901 - 2016885 - G 91 -9.5 -4.62069 | opp_overlap 2016884 TGTTGAGTTGAAAAA GTGATTG CTT CAATCAC ATCTGTTAAGGCTTC SAG2044 2017648 - 2017460 - | hypothetical protein TERM 2626 2017873 - 2017889 + H 76 -9.5 -3.01119 | opp_overlap 2017866, overlap 2017883 CTAGATTACATTTAC TGGTAAC TAT GTTACCA TGTGTATGGATAACT SAG2045 2018009 - 2018548 + | topology modulation protein TERM 2627 2018709 - 2018689 - f 76 -3.3 -5.47431 | TCAAGAGACAAAAAA CTATTCACT TTT AGAAAATAG CTGTCTCTAATCGAC TERM 2628 2019302 - 2019271 - g 73 -7.3 -4.14243 | GACGGTATTTCAAAA GCCCCTGAAGTAG AACGTG CTACCTTAGAGGC TAAGACCAATAAACT SAG2046 2018749 - 2019834 + | glycerol dehydrogenase, putative TERM 2629 2019860 - 2019901 + T 74 -9.1 -3.16564 | gap 1, opp_overlap 2019868 2019869, overlap 2019868 2019869 ACTCGATTATTCCGA T-ACAAAAATCCCTTAGA CACATCA TCTAAGGGGTTTTTGTTA TTAATAAAGTAAAAA TERM 2630 2019868 - 2019892 + T 84 -6.5 -5.31855 | opp_overlap 2019868 2019869, overlap 2019860 2019869 ATTCCGATACAAAAA TCCCTTAGA CACATCA TCTAAGGGG TTTTTGTTATTAATA TERM 2631 2019892 - 2019868 - T 80 -5.7 -4.9725 | opp_overlap 2019868 2019860 2019869, overlap 2019869 ATTCCGATACAAAAA TCCCTTAGACA CAT CATCTAAGGGG TTTTTGTTATTAATA TERM 2632 2019869 - 2019891 + T 74 -7.8 -3.77486 | opp_overlap 2019868 2019869, overlap 2019868 2019860 TTCCGATACAAAAAT CCCTTAGA CACATCA TCTAAGGG GTTTTTGTTATTAAT TERM 2633 2019891 - 2019869 - T 80 -9.2 -3.57627 | opp_overlap 2019869 2019868 2019860, overlap 2019868 TTCCGATACAAAAAT CCCTTAGACA CAT CATCTAAGGG GTTTTTGTTATTAAT SAG2047 2020706 - 2019999 - | hypothetical protein TERM 2634 2020436 - 2020455 + g 80 -8.6 -3.93055 | opp_overlap 2020436 2020435, overlap 2020449 CTTGCTTGTTCAAAC GCTCTTCA ACGT TGAAGGGC TTCTCTTCTTCTTTC TERM 2635 2020449 - 2020463 + g 70 -6.4 -4.0031 | opp_overlap 2020436 2020435, overlap 2020436 ACGCTCTTCAACGTT GAAGGG CTT CTCTTC TTCTTTCATCAAGGT TERM 2636 2021040 - 2021074 + r 84 -3.7 -5.76633 | opp_overlap 2021044, overlap 2021044 ATAAACGACCAACTA AAAAGTAAGAAAGTT AAGAG GACTTTCTTACTTGC TTTTTTTGTATATAG TERM 2637 2021044 - 2021070 + r 85 -8.9 -4.10161 | opp_overlap 2021044, overlap 2021040 ACGACCAACTAAAAA GTAAGAAAGTT AAGAG GACTTTCTTAC TTGCTTTTTTTGTAT TERM 2638 2021070 - 2021044 - R 90 -8.2 -4.90869 | opp_overlap 2021044 2021040 ACGACCAACTAAAAA GTAAGAAAGT TAAGAGG ACTTTCTTAC TTGCTTTTTTTGTAT SAG2048 2022897 - 2021053 - | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein metE 2025179 - 2022942 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 2639 2025493 - 2025512 + r 100 -7.2 -5.69068 | opp_overlap 2025493 CAAAAACACAAAAAA CGTATCTA GAAA TAGATGCG TTTTTTGTGTTTTTA TERM 2640 2025512 - 2025493 - R 85 -5 -5.69068 | opp_overlap 2025493 CAAAAACACAAAAAA CGTATCTA GAAA TAGATGCG TTTTTTGTGTTTTTA SAG2050 2025872 - 2025549 - | hypothetical protein SAG2051 2026554 - 2025862 - | branched-chain amino acid transport protein AzlC, putative SAG2052 2026789 - 2026914 + | hypothetical protein TERM 2641 2026938 - 2026948 + GF 88 -3.2 -5.82316 | CCGTATCTGTACTTT TGGG AAC CCTA TTTTTTTTAGGTGGT TERM 2642 2029198 - 2029175 - gf 71 -7.6 -3.4285 | opp_overlap 2029191, overlap 2029191 GGATTTAAGGGAGAA TTCCAAAACT TAGA AGTTTTAGAA AAATCCATTTATAAG TERM 2643 2029432 - 2029415 - gf 74 -4.8 -4.84274 | opp_overlap 2029415 CAACTAGATCAAAAA GGCCAG CCTCAT CTAGCC ATTTCACCTAATGAT TERM 2644 2031201 - 2031181 - gf 78 -9.8 -3.20367 | opp_overlap 2031185, overlap 2031185 TAATAACCTTATCAA GAAAGCAG AATTG CTGCTTTC CAATAGACAAGCTAC SAG2053 2026877 - 2031589 + | serine protease TERM 2645 2031612 - 2031651 + F 100 -11.6 -4.58283 | opp_overlap 2031612 TAAAAAATAGAGCAA GGCATCAATTACTAGCTA TTAA TAGTTAGTGACTGGTGCC TTTTTGAGGAGCTTA TERM 2646 2032216 - 2032202 - g 76 -5 -4.97312 | opp_overlap 2032202 AAAAGCAATCAAAAA TGACAC TCA GTATCA GTTCCTAGATTTAAC SAG2054 2031822 - 2032508 + | DNA-binding response regulator SAG2055 2032505 - 2033893 + | sensor histidine kinase SAG2056 2033986 - 2034594 + | hypothetical protein TERM 2647 2034637 - 2034615 - T 100 -13.6 -5.36364 | opp_overlap 2034615 CTAAAAATAGAAAAA TCCCAAAAGT TAA ACTTTTGGGA TTTTATACGCGTAAA TERM 2648 2034615 - 2034637 + T 100 -13.6 -4.38712 | opp_overlap 2034615 CTAAAAATAGAAAAA TCCCAAAAGT TAA ACTTTTGGGA TTTTATACGCGTAAA leuS 2037182 - 2034681 - | leucyl-tRNA synthetase TERM 2649 2037422 - 2037441 + H 84 -3.6 -5.80951 | opp_overlap 2037422 CGAGCGTTTATAGAA CTCAAG GGTAGCAG CTTGAG TTTTTTCTTTTACAT SAG2058 2037559 - 2038806 + | major facilitator family protein TERM 2650 2038812 - 2038847 + T 90 -9.2 -4.57304 | opp_overlap 2038812 2038817, overlap 2038817 AACTGACTGATATTA CAAAACAGTATTCCTC AATT GAGAAATACTGTTTTC TTTATTTCATTAGAT TERM 2651 2038847 - 2038812 - T 86 -11.4 -2.65112 | opp_overlap 2038812 2038817, overlap 2038817 AACTGACTGATATTA CAAAACAGTATTCCTC AATT GAGAAATACTGTTTTC TTTATTTCATTAGAT TERM 2652 2038817 - 2038842 + T 95 -9.1 -5.20222 | opp_overlap 2038812 2038817, overlap 2038812 ACTGATATTACAAAA CAGTATTCCTC AATT GAGAAATACTG TTTTCTTTATTTCAT TERM 2653 2038842 - 2038817 - T 100 -11.3 -4.51378 | opp_overlap 2038817 2038812, overlap 2038812 ACTGATATTACAAAA CAGTATTCCTC AATT GAGAAATACTG TTTTCTTTATTTCAT SAG2059 2039694 - 2038849 - | hypothetical protein TERM 2654 2039369 - 2039379 + g 74 -4 -5.12617 | opp_overlap 2039369 GCAACTACGTAAAAA TCAA TAC TTGA TTTTTTAAATGCTTC TERM 2655 2039987 - 2040001 + G 81 -2.8 -5.65496 | overlap 2039988 CTCTCTGTGTCTATC ATGAGA ATC TCTCAA TTTTTATTTTTAATC SAG2060 2039899 - 2041095 + | glycosyl transferase family protein SAG2061 2041160 - 2042365 + | glycosyl transferase family protein TERM 2656 2042398 - 2042377 - T 91 -7.4 -5.25906 | opp_overlap 2042377 ATAAATTAACAAAAA TCCATCTT TATTTT AAGATGGA TTTTTCAGAAGTTTT TERM 2657 2042377 - 2042398 + T 80 -7.4 -4.61527 | opp_overlap 2042377 ATAAATTAACAAAAA TCCATCTT TATTTT AAGATGGA TTTTTCAGAAGTTTT nusG 2042951 - 2042412 - | transcription antitermination protein NusG TERM 2658 2043108 - 2043085 - R 81 -3.8 -5.67283 | AATTCAAATAAAAAA GGCAAAGTTC TGAT GAGGTTTGCC TTAAGATTTTGAAAG SAG2063 2045049 - 2043157 - | pathogenicity protein, putative TERM 2659 2045192 - 2045219 + r 74 -2.2 -5.52384 | overlap 2045190 2045194 AATTTATTTACATTT TATTAAAATAAA CATC TTTTTTTTAATG TTTTTTTGCTCAACA TERM 2660 2045247 - 2045260 + r 86 -3.9 -5.75599 | opp_overlap 2045247 ACAATCTAGTAAAAA TAATC AAAA GATTA TTTTTTTATAATTTA TERM 2661 2045309 - 2045328 + r 74 -7.9 -3.91042 | opp_overlap 2045309 TTTCCACACAAAAAA CCCTTAG TAAAAT CTAAGGG TTTGGGTTGTTTCTA TERM 2662 2045328 - 2045309 - R 100 -7.9 -5.36441 | opp_overlap 2045309 TTTCCACACAAAAAA CCCTTAG TAAAAT CTAAGGG TTTGGGTTGTTTCTA secE 2045534 - 2045361 - | preprotein translocase subunit SecE rpmG 2045722 - 2045570 - | 50S ribosomal protein L33 pbp2A 2048092 - 2045771 - | penicillin-binding protein 2A TERM 2663 2048063 - 2048099 + g 72 -8.3 -3.59984 | opp_overlap 2048063 2048066, overlap 2048066 TTCATCAACACGAAA TAAGTCTATAAACTTAT CAA ATAATTTCATAGACTTA TTATATCAATTTTCA TERM 2664 2048099 - 2048063 - G 88 -10.5 -3.95022 | opp_overlap 2048063 2048066, overlap 2048066 TTCATCAACACGAAA TAAGTCTATAAACTTAT CAA ATAATTTCATAGACTTA TTATATCAATTTTCA TERM 2665 2048096 - 2048066 - G 76 -7.8 -4.09455 | opp_overlap 2048066 2048063, overlap 2048063 ATCAACACGAAATAA GTCTATAAACTTAT CAA ATAATTTCATAGAC TTATTATATCAATTT TERM 2666 2048534 - 2048544 + G 70 -3.2 -4.93877 | CCTAGATATGGAGAC CAGT GGA GCTG TTTTATTTGCTAAAA SAG2067 2048136 - 2049020 + | ribosomal large subunit pseudouridine synthase D TERM 2667 2049009 - 2049035 + T 100 -16.8 -4.39133 | opp_overlap 2049009 AACAATTATAAAAAA GGAGTTGGATAA TAA TTATCCAACTCC TTTTAATCATTATTG TERM 2668 2049035 - 2049009 - T 100 -16.8 -5.4111 | opp_overlap 2049009 AACAATTATAAAAAA GGAGTTGGATAA TAA TTATCCAACTCC TTTTAATCATTATTG SAG2068 2050685 - 2049045 - | hypothetical protein TERM 2669 2050611 - 2050599 - G 78 -4.1 -5.26119 | CTTTGAAAAATAAAA GAATC CTA GACTC AGAAGTGATACTAAA TERM 2670 2050834 - 2050807 - R 74 -2.1 -5.52347 | gap 1, overlap 2050808 AACAAAACGAAAAAA GGATTGAAACCA TAATC CGATTTCAA-CC TCTAAAATTTTTGTC deoB-2 2052066 - 2050855 - | phosphopentomutase deoC 2052804 - 2052133 - | deoxyribose-phosphate aldolase SAG2071 2054036 - 2052834 - | Na+ dependent nucleoside transporter udp 2054836 - 2054057 - | uridine phosphorylase SAG2073 2054994 - 2055731 + | GntR family transcriptional regulator TERM 2671 2056078 - 2056132 + T 100 -29.2 -3.27298 | opp_overlap 2056088 2056095, overlap 2056079 2056082 2056088 2056095 GACTATCATATCTCT ATTATCACAACATAAAACTCCCCTTT GTT AAAGGGGAGTTTTATGTTGTGATAAG TTAGTGATTAGAAGC TERM 2672 2056079 - 2056131 + T 100 -32.7 -2.56164 | opp_overlap 2056088 2056095, overlap 2056078 2056082 2056088 2056095 ACTATCATATCTCTA TTATCACAACATAAAACTCCCCTTT GTT AAAGGGGAGTTTTATGTTGTGATAA GTTAGTGATTAGAAG TERM 2673 2056082 - 2056128 + T 100 -30 -2.58767 | opp_overlap 2056088 2056095, overlap 2056079 2056078 2056088 2056095 ATCATATCTCTATTA TCACAACATAAAACTCCCCTTT GTT AAAGGGGAGTTTTATGTTGTGA TAAGTTAGTGATTAG TERM 2674 2056088 - 2056122 + T 100 -21.8 -3.44586 | opp_overlap 2056088 2056095, overlap 2056082 2056079 2056078 2056095 TCTCTATTATCACAA CATAAAACTCCCCTTT GTT AAAGGGGAGTTTTATG TTGTGATAAGTTAGT TERM 2675 2056122 - 2056088 - T 100 -21.8 -3.44051 | opp_overlap 2056088 2056082 2056079 2056078 2056095, overlap 2056095 TCTCTATTATCACAA CATAAAACTCCCCTTT GTT AAAGGGGAGTTTTATG TTGTGATAAGTTAGT TERM 2676 2056095 - 2056115 + T 100 -14.1 -4.75289 | opp_overlap 2056088 2056095, overlap 2056088 2056082 2056079 2056078 TATCACAACATAAAA CTCCCCTTT GTT AAAGGGGAG TTTTATGTTGTGATA TERM 2677 2056115 - 2056095 - T 100 -14.1 -4.75289 | opp_overlap 2056095 2056088 2056082 2056079 2056078, overlap 2056088 TATCACAACATAAAA CTCCCCTTT GTT AAAGGGGAG TTTTATGTTGTGATA groEL 2057762 - 2056140 - | chaperonin GroEL TERM 2678 2056586 - 2056572 - G 76 -10 -3.05463 | opp_overlap 2056577, overlap 2056576 ACGCGTTGCATTTAA CGCATC TTC GATGCG AAGTTTCATCTCTTT TERM 2679 2056577 - 2056589 + g 76 -7.7 -4.00589 | opp_overlap 2056572 2056576 TTGCATTTAACGCAT CTTCG ATG CGAAG TTTCATCTCTTTTAA TERM 2680 2056801 - 2056775 - G 70 -8.2 -3.30124 | opp_overlap 2056775 2056774 2056778, overlap 2056778 CGGCACCTTCGACAA TAACAGTAGA ATCTTTA TCTACTGTTA CTTTAGCAGACTGTC groES 2058142 - 2057858 - | co-chaperonin GroES SAG2076 2059120 - 2058317 - | ABC transporter, ATP-binding protein SAG2077 2060021 - 2059125 - | ABC transporter, permease protein SAG2078 2060999 - 2060037 - | protein of unknown function/lipoprotein, putative TERM 2681 2061069 - 2061045 - R 100 -9.4 -5.86976 | opp_overlap 2061045 2061041 CCATAAAACAAAAAA CCAACTAGAC CCTAC ATCTAGTTGG TTAATTATTTCTCTC TERM 2682 2061045 - 2061069 + r 77 -8.7 -3.67305 | opp_overlap 2061045, overlap 2061041 CCATAAAACAAAAAA CCAACTAGA CCCTACA TCTAGTTGG TTAATTATTTCTCTC TERM 2683 2061206 - 2061235 + r 100 -13.7 -2.87344 | opp_overlap 2061176 2061198, overlap 2061192 2061208 ATACAAACTTTGCGT GACGTTTGTATCC TTGA GGCTACAAACGTC TATCTAAAGAAACTA TERM 2684 2061208 - 2061233 + r 83 -10.5 -2.98823 | opp_overlap 2061176 2061198, overlap 2061192 2061206 ACAAACTTTGCGTGA CGTTTGTATCC TTGA GGCTACAAACG TCTATCTAAAGAAAC SAG2079 2062261 - 2061464 - | HAD superfamily hydrolase TERM 2685 2061660 - 2061679 + g 100 -9.4 -4.78661 | opp_overlap 2061659 2061657 2061660 GAAATATCTAAATAG TCTGCTAA AGTT TTAGCAGA TTTTCCTTTTTCAAT TERM 2686 2061679 - 2061660 - G 72 -9.4 -2.68471 | opp_overlap 2061660, overlap 2061659 2061657 GAAATATCTAAATAG TCTGCTAA AGTT TTAGCAGA TTTTCCTTTTTCAAT TERM 2687 2062168 - 2062152 - G 80 -8.7 -3.92625 | opp_overlap 2062150 2062147 2062152 GATATGGGAACGAAA GTAGCCC CTT GAGCTAC TATTTGTTTAATTCC SAG2080 2062447 - 2063307 + | glyoxalase family protein SAG2081 2063350 - 2064081 + | hypothetical protein TERM 2688 2064139 - 2064116 - T 100 -12.6 -4.99035 | opp_overlap 2064116 TTATTCACACAAAAA GCAAGAGATA ATCG TATCTCTTGC TTTTTGACAAACTTG TERM 2689 2064116 - 2064139 + T 100 -12.6 -4.58283 | opp_overlap 2064116 TTATTCACACAAAAA GCAAGAGATA ATCG TATCTCTTGC TTTTTGACAAACTTG TERM 2690 2064222 - 2064210 - T 72 -4.9 -4.82661 | opp_overlap 2064210, overlap 2064212 ATTAACAAAAAATAA TTGTT ATT AACAA CTTGTGGATAACTAT nrdG 2065055 - 2064438 - | anaerobic ribonucleoside-triphosphate reductase activating protein SAG2083 2065619 - 2065128 - | acetyltransferase SAG2084 2066560 - 2065628 - | virulence factor MviM, putative SAG2085 2066716 - 2066573 - | hypothetical protein nrdD 2068962 - 2066791 - | anaerobic ribonucleoside triphosphate reductase TERM 2691 2069035 - 2069078 + r 95 -8.5 -5.28755 | gap 1, opp_overlap 2069035, overlap 2069077 TGCAAAGAAAAAAAA TCAATATATTGTGTC-AAGT TTTTT GCTCAGACACAATATATTGA TTTTTTAATCTATTT TERM 2692 2069078 - 2069035 - R 100 -10 -6.23545 | gap 1, opp_overlap 2069035 2069077 TGCAAAGAAAAAAAA TCAATATATTGTGTC-AAG TTTTTTG CTCAGACACAATATATTGA TTTTTTAATCTATTT SAG2087 2070575 - 2069088 - | hypothetical protein SAG2088 2070797 - 2070675 - | hypothetical protein TERM 2693 2070870 - 2070849 - R 100 -7.3 -6.09133 | TATTCGAAAAAAAAA CGACTGAAC AATT GCTCAATCG CTTCGATATTATTCT SAG2089 2071196 - 2070879 - | hypothetical protein TERM 2694 2070954 - 2070970 + g 79 -10.9 -3.07575 | ATCTTCTGGTATAGG CTGAAGG TCT CCTTCAG TTCCATCGGCATTTT SAG2090 2071632 - 2071222 - | Holliday junction resolvase-like protein SAG2091 2071907 - 2071641 - | hypothetical protein TERM 2695 2072049 - 2072004 - R 100 -9.4 -5.1417 | opp_overlap 2072004 2072018 2072048 TTAGAAAATCAAAAA GGGAGCACAAGAAACC-AAGAA GTGA TTCTTTGATTTCTT-TACTCCC TACCTTATAGGTGAT spxA 2072507 - 2072109 - | transcriptional regulator Spx TERM 2696 2072679 - 2072654 - R 87 -7.7 -4.91109 | opp_overlap 2072654 TTTTTAGTATAAAAA TAAGTTCCAAC CACT GTCAGAACTTA TTTTAGTTACATTTA recA 2073862 - 2072723 - | recombinase A TERM 2697 2075263 - 2075248 - R 100 -7.6 -5.52986 | overlap 2075229 ATTTTAGCAAAAAAA GTAGCA AAAG TGCTAC TTAAAACATATCACA tag 2075836 - 2075285 - | DNA-3-methyladenine glycosylase I ruvA 2076449 - 2075859 - | Holliday junction DNA helicase motor protein TERM 2698 2076290 - 2076278 - G 70 -3.4 -4.96468 | GAAAGCCAAATAAAA GATG TGCAT CATC GCGAATGACTTGATG SAG2097 2077707 - 2076451 - | transporter, putative mutL 2079694 - 2077715 - | DNA mismatch repair protein TERM 2699 2078027 - 2078041 + g 71 -8.6 -3.18274 | TACCTCTTCTTCTTT CATCCA AAT TGGATG TTCCCTTAAAATGAA TERM 2700 2078336 - 2078315 - G 73 -3.1 -5.15634 | gap 1 CATTTGACCAAAAAA TTCGAGCTCT GGA AAAG-TCGAA CTTTCTTCCGAATCT TERM 2701 2078571 - 2078545 - G 80 -11 -3.25088 | TTGTAAAGTTAGCAA TAGGTTCAGATA CAG TATCTGCACCTA TAAAAAAGTCATTTT SAG2099 2079920 - 2079819 - | hypothetical protein SAG2100 2079914 - 2080117 + | CSD family cold shock protein TERM 2702 2080126 - 2080150 + Tr 88 -6.5 -5.4833 | opp_overlap 2080126 TAAATAATTAAAAAA GAGCCTAAATG AAT TATTTAGTCTC TTTTTTGTTGCCTAA TERM 2703 2080150 - 2080126 - TR 86 -5.8 -5.4148 | opp_overlap 2080126 TAAATAATTAAAAAA GAGCCTAAAT GAATT ATTTAGTCTC TTTTTTGTTGCCTAA hexA 2082750 - 2080174 - | DNA mismatch repair protein TERM 2704 2081815 - 2081795 - G 74 -2.6 -5.40072 | overlap 2081798 TTTCTCTCAAAAAAA TAATCAAG AAACA CTTGAATA ATATCTTGACGTTCC TERM 2705 2081812 - 2081798 - G 71 -4.3 -4.79949 | overlap 2081795 CTCTCAAAAAAATAA TCAAG AAACA CTTGA ATAATATCTTGACGT TERM 2706 2082174 - 2082196 + g 88 -4.9 -5.53991 | ATGATAAAAGCAAGT TCATCTGCT TCGTC AGTAGGTGA TTTTTTTCGTCCGTC TERM 2707 2082715 - 2082683 - G 84 -4.3 -5.54079 | opp_overlap 2082683 2082686 CTAAAAAGCAAAAAA GCATCTGGATA ATTCTCTTTTA TATCCAGATAC TGTTGCATTCCCGGT SAG2102 2083244 - 2082807 - | arginine repressor ArgR, putative TERM 2708 2083526 - 2083505 - g 78 -5.9 -4.81851 | overlap 2083506 AGTGAAATTCAAAAA GTTGTTCCA GATA TGGAACAAT CGACCATTCTTTCTT TERM 2709 2083525 - 2083506 - g 78 -9.4 -3.48026 | overlap 2083505 GTGAAATTCAAAAAG TTGTTCCA GATA TGGAACAA TCGACCATTCTTTCT argS 2083466 - 2085157 + | arginyl-tRNA synthetase TERM 2710 2085170 - 2085199 + F 100 -8 -5.5208 | opp_overlap 2085170 2085174, overlap 2085171 2085174 TAAGAAATGACACTA CTAAGACTGTCA AATTTA TGACAGTCTTAA TTTTTTATATTATAA TERM 2711 2085199 - 2085170 - f 77 -10.2 -2.75669 | opp_overlap 2085170 2085171 2085174, overlap 2085174 TAAGAAATGACACTA CTAAGACTGTCA AATTTA TGACAGTCTTAA TTTTTTATATTATAA TERM 2712 2085171 - 2085198 + F 95 -11.5 -3.89621 | opp_overlap 2085170 2085174, overlap 2085170 2085174 AAGAAATGACACTAC TAAGACTGTCA AATTTA TGACAGTCTTA ATTTTTTATATTATA TERM 2713 2085195 - 2085174 - f 74 -8.8 -3.26834 | opp_overlap 2085171 2085170 2085174, overlap 2085170 AAATGACACTACTAA GACTGTCA AATTTA TGACAGTC TTAATTTTTTATATT TERM 2714 2085174 - 2085195 + F 82 -8.8 -4.03002 | opp_overlap 2085174 2085170, overlap 2085171 2085170 AAATGACACTACTAA GACTGTCA AATTTA TGACAGTC TTAATTTTTTATATT SAG2104 2085245 - 2085553 + | hypothetical protein TERM 2715 2085551 - 2085582 + T 100 -13.3 -4.04811 | opp_overlap 2085557, overlap 2085557 AGTGGAGGACCAAAA TAAAAATACAGGC CAGACA GCCTGTATTTTTA TTTATCGTAATTTCT TERM 2716 2085557 - 2085576 + T 100 -7.9 -5.40464 | opp_overlap 2085557, overlap 2085551 GGACCAAAATAAAAA TACAGGC CAGACA GCCTGTA TTTTTATTTATCGTA TERM 2717 2085576 - 2085557 - T 100 -8.6 -5.50723 | opp_overlap 2085551 2085557 GGACCAAAATAAAAA TACAGGCC AGAC AGCCTGTA TTTTTATTTATCGTA SAG2105 2086452 - 2085580 - | hypothetical protein TERM 2718 2086504 - 2086480 - R 85 -6.6 -5.08824 | gap 1, opp_overlap 2086480 2086486 TCCTTATTCAAAAAA GCTAAAGTTGT TTAA ACAACTT-AGC TTAATAACATCATAA SAG2106 2087504 - 2086560 - | hypothetical protein TERM 2719 2087269 - 2087256 - G 73 -3.1 -5.09259 | opp_overlap 2087237 2087235, overlap 2087237 2087257 TATTTCAAAAGAAAA CCAGT GTTT ACTGA CAGCTGAAATAACCT aspS 2089245 - 2087494 - | aspartyl-tRNA synthetase TERM 2720 2089333 - 2089293 - R 79 -4.8 -5.22006 | gap 1, overlap 2089296 CTATTATAACAAAAA GCACCTAAAAACCCCACCC ATTA AGG-AGAGTTTTTAGGAAC TGTTTTACAATCCTA hisS 2090618 - 2089338 - | histidyl-tRNA synthetase TERM 2721 2089762 - 2089749 - G 70 -8.1 -3.34401 | AAAATAGGATACTAA GCCGT CATA ACGGC CTCCAGCACAGATCG TERM 2722 2090772 - 2090743 - H 79 -3.7 -5.61881 | opp_overlap 2090748, overlap 2090744 TTGTAAAAATAAAAA GTTTTGTCAAGTA ACTT TACTTTACAAAAA AGATATGTTATCATA TERM 2723 2090771 - 2090744 - H 72 -7.2 -3.95502 | opp_overlap 2090748, overlap 2090743 TGTAAAAATAAAAAG TTTTGTCAAGTA ACTT TACTTTACAAAA AAGATATGTTATCAT TERM 2724 2090784 - 2090774 - H 74 -4 -5.26316 | overlap 2090776 TTACTTTACAAAAAA GATA TGT TATC ATAGTGAAGTTGATG rpmF 2090838 - 2091020 + | 50S ribosomal protein L32 rpmG 2091036 - 2091185 + | 50S ribosomal protein L33 TERM 2725 2091201 - 2091225 + T 81 -4.4 -5.32565 | gap 1, opp_overlap 2091201 GACATCATACAGAAA GCCTATGAAAT CAAC GTTTC-TAGGC TTTTTTGCTTGCTTA SAG2111 2091854 - 2091333 - | hypothetical protein SAG2112 2093436 - 2091952 - | phage integrase family site specific recombinase SAG2113 2093694 - 2093446 - | hypothetical protein TERM 2726 2093739 - 2093776 + r 100 -12.9 -3.29511 | opp_overlap 2093744, overlap 2093744 AAGTTAGTTATTTTT GGAAAGGCGATTTGTAG CTTG CTACAGGTCGTCTTTTC TTATGCCCCAATAGG TERM 2727 2093744 - 2093771 + r 93 -9.2 -4.77165 | opp_overlap 2093744, overlap 2093739 AGTTATTTTTGGAAA GGCGATTTGTAG CTTG CTACAGGTCGTC TTTTCTTATGCCCCA SAG2114 2094788 - 2093760 - | hypothetical protein SAG2115 2095222 - 2094791 - | hypothetical protein TERM 2728 2095014 - 2095026 + g 71 -4.9 -4.67354 | overlap 2095010 2095007 GAATAGCCCAAGTCT TTCAA GGC TTGAA TTTTGTCTGTATCTT TERM 2729 2095335 - 2095351 + r 79 -8 -4.10453 | TTCAAATCGCTGAAC CCCTTG CTTAT CAAGGG TTTTGACCACATTTC SAG2116 2095953 - 2095498 - | hypothetical protein SAG2117 2096168 - 2095953 - | hypothetical protein TERM 2730 2096250 - 2096280 + H 100 -10.6 -5.31456 | TAATTAGATTTACTG TCCTTGAACGATGT ACC AGATTGTTCAAGGA TTTTTTCTACCTTCC SAG2118 2096491 - 2097411 + | Cro/CI family transcriptional regulator TERM 2731 2098307 - 2098290 - g 84 -3.4 -5.69473 | GAGAGTACAAAAAAA GCTCAG GACATA CTAAGC CTATATAACATTATG SAG2119 2097432 - 2098553 + | hypothetical protein SAG2120 2098781 - 2099590 + | hypothetical protein TERM 2732 2099809 - 2099833 + F 83 -4.4 -5.61881 | gap 1, opp_overlap 2099809 ATTGATTATAAAAAA GCCTATGAAAT CAAT ATTTC-TGGGC TTTTTATTTTTAAAA TERM 2733 2100366 - 2100356 - g 70 -6.8 -4.04326 | opp_overlap 2100356 GAATTAAATACCAAA GGTG ATA CACC TTTTTATGAAATCAA TERM 2734 2100356 - 2100366 + G 80 -6.8 -4.85599 | opp_overlap 2100356 GAATTAAATACCAAA GGTG ATA CACC TTTTTATGAAATCAA SAG2121 2100041 - 2100712 + | hypothetical protein TERM 2735 2100879 - 2100862 - g 74 -4.1 -5.08011 | overlap 2100863 AAAACTTTTAAAAAA GCAACAC TACA GTGTTGA CAGTGCTTCAAATGG TERM 2736 2101448 - 2101434 - g 90 -7.2 -5.15167 | opp_overlap 2101433 GATCACTAATAAAAA CTAAAC GAG GTTTAG GATATGTTATTCCAA SAG2122 2100797 - 2101468 + | DNA-binding response regulator TERM 2737 2101622 - 2101610 - g 91 -4.9 -5.89947 | overlap 2101599 CAAATCTAAAAAAAA TTTAG AAG CTAAA GCTGTGCAAATGAGT SAG2123 2101452 - 2102816 + | sensor histidine kinase TERM 2738 2102868 - 2102822 - T 100 -12 -4.15197 | opp_overlap 2102836, overlap 2102836 GAAAGACTAGAGAAA GGAAATAAAAAAAACGATAGAT TAC ACCTATCGTTTTTTTTATTTAA CTTAAACTCAATTTA TERM 2739 2102854 - 2102836 - T 100 -8.2 -6.25578 | opp_overlap 2102836, overlap 2102822 AGGAAATAAAAAAAA CGATAGAT TAC ACCTATCG TTTTTTTTATTTAAC TERM 2740 2102836 - 2102854 + T 100 -6 -6.23545 | opp_overlap 2102836 2102822 AGGAAATAAAAAAAA CGATAGAT TAC ACCTATCG TTTTTTTTATTTAAC SAG2124 2104479 - 2102926 - | hypothetical protein arcC-1 2105499 - 2104573 - | carbamate kinase argF-1 2106509 - 2105511 - | ornithine carbamoyltransferase SAG2127 2106612 - 2107907 + | sensor histidine kinase SAG2128 2107904 - 2108737 + | response regulator TERM 2741 2108804 - 2108832 + F 100 -12.6 -4.95876 | opp_overlap 2108808, overlap 2108808 TTCATAAATCTCCAA CAAACACCTTGT CTACC GCAAGGTGTTTG TTTTTGCTTCTAGTT TERM 2742 2108828 - 2108808 - f 74 -6.9 -4.19371 | opp_overlap 2108808 2108804 TAAATCTCCAACAAA CACCTTG TCTACCG CAAGGTG TTTGTTTTTGCTTCT TERM 2743 2108808 - 2108828 + F 89 -7.6 -4.98128 | opp_overlap 2108808, overlap 2108804 TAAATCTCCAACAAA CACCTTGT CTACC GCAAGGTG TTTGTTTTTGCTTCT TERM 2744 2109306 - 2109295 - g 90 -3.6 -5.86061 | GGTGACCAAAAAAAA GCCG CTAG CGAC CTTCTTGATAAGGTG SAG2129 2108959 - 2109681 + | amino acid ABC transporter, ATP-binding protein TERM 2745 2109992 - 2109980 - g 73 -6.3 -4.42788 | TCCAATTTTACAAAA TACTG TAA CAGTA CTGATGCAAATTGAT SAG2130 2109684 - 2111198 + | amino acid ABC transporter, amino acid-binding protein/permease protein TERM 2746 2111265 - 2111224 - T 100 -13.3 -2.85574 | opp_overlap 2111234, overlap 2111234 TCAATGGTATTAAAT GATTTAAAAAGAGCATGTC GCAT GACATGCTCTTTTTAATTG CCAAATAAAGCTTAT TERM 2747 2111255 - 2111234 - T 100 -13.1 -4.72386 | opp_overlap 2111234, overlap 2111224 TAAATGATTTAAAAA GAGCATGTC GCAT GACATGCTC TTTTTAATTGCCAAA TERM 2748 2111234 - 2111255 + T 100 -13.1 -4.8622 | opp_overlap 2111234 2111224 TAAATGATTTAAAAA GAGCATGTC GCAT GACATGCTC TTTTTAATTGCCAAA SAG2131 2113820 - 2111277 - | hypothetical protein SAG2132 2114544 - 2113801 - | hypothetical protein TERM 2749 2114668 - 2114646 - R 95 -10.6 -4.33708 | AAATGATTACTAAAA GCCGTTCAAC TAA ATCGAACGGC TAAGTAGTATTAAAA SAG2133 2115034 - 2114678 - | hypothetical protein TERM 2750 2115131 - 2115105 - R 70 -8.2 -3.15249 | GATACTTTCTATTAA TCTTCTTGTTTA CGA TAAATAAGAAGA GCAAGTATCATCGAT SAG2134 2117419 - 2115101 - | hypothetical protein TERM 2751 2116078 - 2116090 + g 70 -3.3 -4.89729 | opp_overlap 2116070 GATATAACTGCTTAG TAGCC GTT GGCAA TTTTTGAATTTTATC TERM 2752 2117434 - 2117448 + H 85 -5 -5.52986 | TTTTTTCTCCTATTT TGGACA TAT TGTTCA TTTTTTTGATAAAAT TERM 2753 2117664 - 2117691 + G 70 -3.4 -4.94902 | opp_overlap 2117664 CAACGATTAATCTAA CTAAAACAGCTG GAAT CAGTCGTTCTAG TTTTTATACTCATTA SAG2135 2117558 - 2118097 + | TetR family transcriptional regulator TERM 2754 2118120 - 2118100 - T 85 -8.3 -4.35926 | opp_overlap 2118098 2118097 2118100 ACCTCAAACTTAAAA CCAGCCT TCCTTAT AGGCTGG TCATTTTTAGTTAGG TERM 2755 2118100 - 2118120 + T 71 -8.3 -3.32518 | opp_overlap 2118100, overlap 2118098 2118097 ACCTCAAACTTAAAA CCAGCCT TCCTTAT AGGCTGG TCATTTTTAGTTAGG SAG2136 2118479 - 2118183 - | hypothetical protein TERM 2756 2118699 - 2118685 - R 100 -8.6 -5.60864 | opp_overlap 2118685 TATATAGCAAAAAAA GCCTAT AAA ATAGGC TTTTAAAGTATGTAA TERM 2757 2118685 - 2118699 + r 87 -8.6 -4.18401 | opp_overlap 2118685 TATATAGCAAAAAAA GCCTAT AAA ATAGGC TTTTAAAGTATGTAA rpsD 2119334 - 2118723 - | 30S ribosomal protein S4 TERM 2758 2119644 - 2119655 + r 72 -5.8 -4.36063 | opp_overlap 2119644 TATAGAAACAAAAAA CCTC AGTC GAGG TTTTCATACTATTCT TERM 2759 2119655 - 2119644 - R 95 -5.8 -5.76237 | opp_overlap 2119644 TATAGAAACAAAAAA CCTC AGTC GAGG TTTTCATACTATTCT SAG2138 2119951 - 2119664 - | hypothetical protein dnaC-2 2121318 - 2119963 - | replicative DNA helicase TERM 2760 2120475 - 2120460 - G 83 -9 -4.24745 | TATCATCAATATAAA TTGGCG CATC CGCCAA AGCTCCTTGAGCAAT rplI 2121813 - 2121361 - | 50S ribosomal protein L9 SAG2141 2123801 - 2121819 - | DHH family protein TERM 2761 2122738 - 2122719 - G 70 -2.8 -5.19212 | overlap 2122720 2122734 ATTACTAGCAAAAAA TTGCATCC CTAC AGATGCAC CTAGTGCATCCATGT TERM 2762 2123857 - 2123837 - R 100 -14 -4.76193 | AATTATAACACAAAA CGCCCCTG ATAAA CAGGGGCG AACACTATTATCAAT gidA 2125709 - 2123868 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2763 2125401 - 2125413 + g 76 -4.9 -4.90918 | overlap 2125408 GTCAATCATAGCTTG TCTTA AGG TAAGA TTTTCTTGCTTTTCT TERM 2764 2125873 - 2125817 - R 90 -9.6 -4.25747 | opp_overlap 2125867, overlap 2125824 TAAAACACAAAAATA GCCAAAACTCTCGAAAATTGTACGTC AAAAA GACTTACAAATTCCATGAGCTTTGAC CATCATAGTTATTGT SAG2143 2126549 - 2125938 - | hypothetical protein trmU 2127702 - 2126581 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase sdhB 2127948 - 2128616 + | L-serine dehydratase, iron-sulfur-dependent, beta subunit sdhA 2128631 - 2129503 + | L-serine dehydratase, iron-sulfur-dependent, alpha subunit TERM 2765 2129536 - 2129576 + T 100 -20.2 -4.65933 | opp_overlap 2129536 2129546, overlap 2129546 CTCTTTCCCTGAAAA TAAATAAAAACGCTACAG CTTTA CTGTAGCGTTTTTATTTA TTTGTTTTAGCAATC TERM 2766 2129576 - 2129536 - T 100 -20.9 -4.07568 | opp_overlap 2129536 2129546, overlap 2129546 CTCTTTCCCTGAAAA TAAATAAAAACGCTACAGC TTT ACTGTAGCGTTTTTATTTA TTTGTTTTAGCAATC TERM 2767 2129546 - 2129566 + T 100 -11.2 -5.56573 | opp_overlap 2129536 2129546, overlap 2129536 GAAAATAAATAAAAA CGCTACAG CTTTA CTGTAGCG TTTTTATTTATTTGT TERM 2768 2129566 - 2129546 - T 100 -11.9 -5.59962 | opp_overlap 2129546 2129536, overlap 2129536 GAAAATAAATAAAAA CGCTACAGC TTT ACTGTAGCG TTTTTATTTATTTGT SAG2147 2130342 - 2129638 - | protein of unknown function/lipoprotein, putative TERM 2769 2130437 - 2130396 - R 76 -6.1 -4.6644 | opp_overlap 2130401 2130405, overlap 2130401 AATAGATGTTAAAAA TATTACAAAGAGATTTAAT TTTA AGTAAATCTCTTTGTTTTA TCAACTTTTATTAAT TERM 2770 2130401 - 2130432 + r 95 -10.4 -4.46581 | opp_overlap 2130396 2130401, overlap 2130405 ATGTTAAAAATATTA CAAAGAGATTTAAT TTTA AGTAAATCTCTTTG TTTTATCAACTTTTA TERM 2771 2130432 - 2130401 - R 83 -10.4 -3.02233 | opp_overlap 2130401 2130405, overlap 2130396 ATGTTAAAAATATTA CAAAGAGATTTAAT TTTA AGTAAATCTCTTTG TTTTATCAACTTTTA TERM 2772 2130405 - 2130428 + r 74 -5.4 -4.77775 | opp_overlap 2130401 2130396, overlap 2130401 TAAAAATATTACAAA GAGATTTAAT TTTA AGTAAATCTC TTTGTTTTATCAACT SAG2148 2130987 - 2130448 - | LysM domain-containing protein TERM 2773 2131168 - 2131206 + r 79 -4.7 -5.14563 | opp_overlap 2131168 2131174 TTCACATTATATAAA TGAAAAGGCTAAGACCA TAAAC TGATCTTAACCTTTTAA TTTTTTAATAGAAAC TERM 2774 2131206 - 2131168 - R 85 -9.1 -4.11404 | opp_overlap 2131168, overlap 2131174 TTCACATTATATAAA TGAAAAGGCTAAGACCA TAAAC TGATCTTAACCTTTTAA TTTTTTAATAGAAAC TERM 2775 2131200 - 2131174 - R 85 -8.1 -4.65153 | opp_overlap 2131168, overlap 2131168 TTATATAAATGAAAA GGCTAAGACCA TAAAC TGATCTTAACC TTTTAATTTTTTAAT SAG2149 2131997 - 2131203 - | cobalt transport family protein SAG2150 2132832 - 2131990 - | cobalt transporter ATP-binding subunit TERM 2776 2132791 - 2132766 - G 73 -5.3 -4.62783 | overlap 2132767 GATTGACGTCAAAAA GGGCACGCCCT TCAA AAGGAGTGCCG GCTTGATAGGTATAA TERM 2777 2132790 - 2132767 - G 73 -8.8 -3.37188 | overlap 2132766 ATTGACGTCAAAAAG GGCACGCCCT TCAA AAGGAGTGCC GGCTTGATAGGTATA SAG2151 2133647 - 2132808 - | cobalt transporter ATP-binding subunit pgsA 2134189 - 2133647 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase SAG2153 2135595 - 2134312 - | M16 family peptidase SAG2154 2136841 - 2135597 - | hypothetical protein TERM 2778 2136451 - 2136478 + g 73 -8.6 -3.30159 | TAAGGTTTTTCTTCT CAGTATCAAAAA TAGA TGTTTGATACTG TTCTAAAGAAATTAA TERM 2779 2137353 - 2137327 - g 73 -6.6 -4.22414 | opp_overlap 2137327, overlap 2137329 AACGTAATATAGAAA TAGCTGAAAAAC AGC GTGTTTCAGCAA TCGTTAAAGAAATGA TERM 2780 2137351 - 2137329 - g 81 -9.2 -3.70043 | opp_overlap 2137327, overlap 2137327 CGTAATATAGAAATA GCTGAAAAAC AGC GTGTTTCAGC AATCGTTAAAGAAAT SAG2155 2137080 - 2137433 + | hypothetical protein TERM 2781 2138340 - 2138328 - g 74 -4.1 -5.10461 | opp_overlap 2138329, overlap 2138329 TTGAGCTAATAAAAA CCGTT ACC AACGA TTATCCGATTCTCTT recF 2137436 - 2138545 + | recombination protein F TERM 2782 2138534 - 2138553 + T 100 -10.8 -4.75404 | opp_overlap 2138534 ATTAATGAAAAAAAA GCAACAGA TTAA TCTGTTGC TTTTTAATAAGATTT TERM 2783 2138553 - 2138534 - T 100 -10.8 -5.96521 | opp_overlap 2138534 ATTAATGAAAAAAAA GCAACAGA TTAA TCTGTTGC TTTTTAATAAGATTT SAG2157 2139393 - 2138557 - | transporter, putative SAG2158 2140141 - 2139479 - | Cro/CI family transcriptional regulator TERM 2784 2140183 - 2140201 + r 100 -11 -4.7153 | opp_overlap 2140183 TTTATGCAACAAAAA GCATCCTC ATA GGGGATGC TTTTTGCCCTTATTT TERM 2785 2140201 - 2140183 - R 95 -8.8 -5.10461 | opp_overlap 2140183 TTTATGCAACAAAAA GCATCCTC ATA GGGGATGC TTTTTGCCCTTATTT guaB 2141697 - 2140216 - | inositol-5-monophosphate dehydrogenase SAG2160 2142339 - 2141854 - | ArgR family transcriptional regulator SAG2161 2143029 - 2142349 - | Crp/FNR family transcriptional regulator SAG2162 2143237 - 2143941 + | hypothetical protein TERM 2786 2143947 - 2143977 + F 100 -11.4 -5.54192 | opp_overlap 2143950 2143956, overlap 2143950 AACGCTATAACATTA AAACGAAAAGTAAA AAT TTTACTTTTCGTTA TTTTTTTAGGTTAAT TERM 2787 2143950 - 2143974 + F 100 -13.1 -4.83715 | opp_overlap 2143950 2143956, overlap 2143947 GCTATAACATTAAAA CGAAAAGTAAA AAT TTTACTTTTCG TTATTTTTTTAGGTT TERM 2788 2143974 - 2143950 - f 100 -13.1 -4.46656 | opp_overlap 2143950 2143947, overlap 2143956 GCTATAACATTAAAA CGAAAAGTAAA AAT TTTACTTTTCG TTATTTTTTTAGGTT arcA 2144208 - 2145440 + | arginine deiminase SAG2164 2145467 - 2145877 + | acetyltransferase argF-2 2145893 - 2146906 + | ornithine carbamoyltransferase TERM 2789 2146919 - 2146947 + F 100 -12.6 -4.09685 | opp_overlap 2146916 2146913 2146921 2146941 TAAATTAAACGACTA TAGGGAGTTGAC ATATA GTCAATTCCCTA TTTTAGGAAATGAGG TERM 2790 2146945 - 2146921 - f 71 -8.6 -2.90456 | opp_overlap 2146919, overlap 2146916 2146913 2146941 AATTAAACGACTATA GGGAGTTGAC ATATA GTCAATTCCC TATTTTAGGAAATGA arcD 2146969 - 2148396 + | arginine/ornithine antiporter TERM 2791 2149130 - 2149140 + G 86 -5.4 -5.28166 | overlap 2149132 CATCGTCTTAACTGG CGTT GAC AACG TTTTTGTTAATTTTA arcC-2 2148417 - 2149373 + | carbamate kinase TERM 2792 2149424 - 2149480 + T 100 -20.8 -3.55946 | gap 1, opp_overlap 2149435 2149440, overlap 2149426 2149426 2149440 ATGTCACTCCTTAGG CAT-TCCTATAATAAAAGAGAGCTAGA TATA TCTAGCTCTCTTTTATTATAGGACATA TATTATTTAAAATAG TERM 2793 2149426 - 2149477 + T 100 -25 -2.60309 | opp_overlap 2149435 2149440, overlap 2149424 2149426 2149440 GTCACTCCTTAGGCA TTCCTATAATAAAAGAGAGCTAGA TATA TCTAGCTCTCTTTTATTATAGGAC ATATATTATTTAAAA TERM 2794 2149426 - 2149478 + T 100 -23.4 -3.35054 | gap 1, opp_overlap 2149435 2149440, overlap 2149426 2149424 2149440 GTCACTCCTTAGGCA T-TCCTATAATAAAAGAGAGCTAGA TATA TCTAGCTCTCTTTTATTATAGGACA TATATTATTTAAAAT TERM 2795 2149468 - 2149435 - T 100 -18.5 -3.31461 | opp_overlap 2149426 2149426 2149424 2149440, overlap 2149440 TAGGCATTCCTATAA TAAAAGAGAGCTAGA TATA TCTAGCTCTCTTTTA TTATAGGACATATAT TERM 2796 2149440 - 2149463 + T 100 -14 -4.77165 | opp_overlap 2149435 2149440, overlap 2149426 2149426 2149424 ATTCCTATAATAAAA GAGAGCTAGA TATA TCTAGCTCTC TTTTATTATAGGACA TERM 2797 2149463 - 2149440 - T 100 -14 -4.77567 | opp_overlap 2149440 2149426 2149426 2149424, overlap 2149435 ATTCCTATAATAAAA GAGAGCTAGA TATA TCTAGCTCTC TTTTATTATAGGACA trpS 2150508 - 2149483 - | tryptophanyl-tRNA synthetase II SAG2169 2151308 - 2150616 - | hypothetical protein TERM 2798 2151475 - 2151511 + H 70 -3.8 -4.9934 | overlap 2151474 2151481 AAATAAAAATGTTAT GACTGAGTTGTCAATA TTATT TATTGACAGCTTTCTC TTTTTATCATGTTAT TERM 2799 2151481 - 2151505 + H 85 -8 -4.60808 | overlap 2151474 2151475 AAATGTTATGACTGA GTTGTCAATA TTATT TATTGACAGC TTTCTCTTTTTATCA SAG2170 2151552 - 2152424 + | hypothetical protein SAG2171 2152490 - 2154109 + | ABC transporter, ATP-binding protein TERM 2800 2154216 - 2154181 - f 70 -7.1 -3.72241 | gap 1, opp_overlap 2154172 2154187 2154215 TATTAATCATTTAAA TAAAAAGGTTGGAACA AATAG TGT-CCAGCCTTTTTA TCTTAGGAGATATAT TERM 2801 2154187 - 2154210 + F 70 -3.9 -5.0916 | gap 1, opp_overlap 2154181, overlap 2154172 TCATTTAAATAAAAA GGTTGGAACA AATAG TGT-CCAGCC TTTTTATCTTAGGAG SAG2172 2154232 - 2156811 + | hypothetical protein TERM 2802 2156832 - 2156799 - T 100 -17.1 -5.07107 | opp_overlap 2156804, overlap 2156804 TAAATTTGGAAAAAA TAAAATAGGATGAGA GTAT TCTCATCCTATTTTA TTAACAAAAAAACGC TERM 2803 2156827 - 2156804 - T 100 -12.6 -5.42198 | opp_overlap 2156804, overlap 2156799 TTGGAAAAAATAAAA TAGGATGAGA GTAT TCTCATCCTA TTTTATTAACAAAAA TERM 2804 2156804 - 2156827 + T 100 -12.6 -4.63218 | opp_overlap 2156804 2156799 TTGGAAAAAATAAAA TAGGATGAGA GTAT TCTCATCCTA TTTTATTAACAAAAA TERM 2805 2156860 - 2156845 - T 81 -3.2 -5.84381 | opp_overlap 2156849 TTATTAACAAAAAAA CGCCGA CAAA TCAACG TTTAGATGTGTCTTA TERM 2806 2156974 - 2156964 - T 100 -6.8 -5.72622 | opp_overlap 2156964 CGGATAAATAAAAAA CTGC AAA GCAG TTATCAATAGTCCGT TERM 2807 2157349 - 2157329 - T 100 -12.7 -3.75193 | opp_overlap 2157329 AATCAGATATTGAAA GCCTAGATA GAT TATCTAGGC TTTTTATTTGTTTTT TERM 2808 2157329 - 2157349 + T 100 -12.7 -5.63012 | opp_overlap 2157329 AATCAGATATTGAAA GCCTAGATA GAT TATCTAGGC TTTTTATTTGTTTTT SAG2173 2157869 - 2157390 - | SPOUT methyltransferase superfamily protein TERM 2809 2157972 - 2157990 + H 95 -10.4 -4.5187 | opp_overlap 2157970 AACTATAATCAAGGT TATCCACA AGT TGTGGATA TTTCCTTTTTTTAGC SAG2174 2158070 - 2159299 + | serine protease TERM 2810 2159370 - 2159336 - f 93 -10.1 -4.4296 | opp_overlap 2159341, overlap 2159337 TAAGATATAGTAAAA TTAAAGGGGTTGGTC AGATA GACCAATCCCTTTAG TAAGTCTATAGAATC TERM 2811 2159369 - 2159337 - f 100 -13.6 -3.24691 | opp_overlap 2159341, overlap 2159336 AAGATATAGTAAAAT TAAAGGGGTTGGTC AGATA GACCAATCCCTTTA GTAAGTCTATAGAAT TERM 2812 2159341 - 2159365 + F 100 -12.2 -3.78736 | opp_overlap 2159337 2159336 TATAGTAAAATTAAA GGGGTTGGTC AGATA GACCAATCCC TTTAGTAAGTCTATA TERM 2813 2160039 - 2160021 - g 78 -6.8 -4.67048 | TCACTTCAAAATAAA GATGTCTT TCT AAAACATC AAGAAAATGAGTTAG TERM 2814 2160058 - 2160047 - g 71 -4.4 -4.82518 | opp_overlap 2160047, overlap 2160042 AAAACATCAAGAAAA TGAG TTAG CTCA ATTTCTAGGTAGCAA SAG2175 2159397 - 2160170 + | ParB family partitioning protein