TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.637115 %AT, 1784167 nt, 11276 terms. Intergenic: 0.678338 %AT, H2T: 254861 nt, 2172 terms; T2T: 47525 nt, 1200 terms; H2H: 58031 nt, 1029 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|76786714|ref|NC_007432.1| Streptococcus agalactiae A909, complete genome (length 2127839) dnaA 101 - 1462 + | chromosomal replication initiation protein dnaN 1617 - 2753 + | DNA polymerase III subunit beta TERM 1 2755 - 2793 + F 100 -20.7 -3.35438 | opp_overlap 2755 2758 2763, overlap 2758 2763 TTCGTACTAACTAAA TAAGAAAACTACCCAAG AATAA CTTGGGTAGTTTTCTTA TTCTAAGATATGCTA TERM 2 2793 - 2755 - f 100 -20.7 -3.95584 | opp_overlap 2755 2758 2763, overlap 2758 2763 TTCGTACTAACTAAA TAAGAAAACTACCCAAG AATAA CTTGGGTAGTTTTCTTA TTCTAAGATATGCTA TERM 3 2790 - 2758 - f 100 -18 -4.10437 | opp_overlap 2755 2758 2763, overlap 2755 2763 GTACTAACTAAATAA GAAAACTACCCAAG AATAA CTTGGGTAGTTTTC TTATTCTAAGATATG TERM 4 2758 - 2790 + F 100 -18 -3.81447 | opp_overlap 2758 2755 2763, overlap 2755 2763 GTACTAACTAAATAA GAAAACTACCCAAG AATAA CTTGGGTAGTTTTC TTATTCTAAGATATG TERM 5 2785 - 2763 - f 100 -12.1 -5.03961 | opp_overlap 2758 2755 2763, overlap 2758 2755 AACTAAATAAGAAAA CTACCCAAG AATAA CTTGGGTAG TTTTCTTATTCTAAG TERM 6 2763 - 2785 + F 100 -12.1 -4.95547 | opp_overlap 2763 2758 2755, overlap 2758 2755 AACTAAATAAGAAAA CTACCCAAG AATAA CTTGGGTAG TTTTCTTATTCTAAG TERM 7 3282 - 3272 - g 85 -2.6 -5.79595 | CTCTAAAATAAAAAA TATT TTG AATA GATATCGTCTAGGAA SAK_0003 2823 - 3704 + | diacylglycerol kinase domain-containing protein SAK_0004 3714 - 3911 + | hypothetical protein SAK_0005 4113 - 4229 + | hypothetical protein TERM 8 4250 - 4289 + F 85 -11.1 -3.19442 | opp_overlap 4247 4258, overlap 4252 4255 TAATAAAATTTATTG GTTAATTAGTAGAAATA TTATTC TATTTCTACTAATTATC TTAGCTATATTAACT TERM 9 4252 - 4287 + F 90 -12.3 -3.15583 | opp_overlap 4247 4258, overlap 4250 4255 ATAAAATTTATTGGT TAATTAGTAGAAATA TTATTC TATTTCTACTAATTA TCTTAGCTATATTAA TERM 10 4255 - 4284 + F 82 -9.6 -3.70848 | opp_overlap 4247 4258, overlap 4252 4250 AAATTTATTGGTTAA TTAGTAGAAATA TTATTC TATTTCTACTAA TTATCTTAGCTATAT TERM 11 4361 - 4419 + F 80 -7.7 -4.20875 | opp_overlap 4365 4367, overlap 4367 AATTTAAATGAGGGT GAAAGAGTGGCATAATGATAAGCAAAT CTGAA ATTTTCTTACCATCATACCGCTTTTTC TTCTATTTTTTGATA TERM 12 4413 - 4367 - f 71 -8.2 -3.37259 | opp_overlap 4367 4361, overlap 4365 AATGAGGGTGAAAGA GTGGCATAATGATAAGCAAATC TGA AATTTTCTTACCATCATACCGC TTTTTCTTCTATTTT TERM 13 4367 - 4413 + F 74 -3.1 -5.35365 | opp_overlap 4365 4367, overlap 4361 AATGAGGGTGAAAGA GTGGCATAATGATAAGCAAAT CTGAA ATTTTCTTACCATCATACCGC TTTTTCTTCTATTTT TERM 14 4494 - 4522 + G 70 -5.3 -4.41616 | opp_overlap 4509 TTAACAGCAGGTATT GTAGGCTTACCAA ATG TTGGTAAATCAAC TTTATTTAACGCAAT ychF 4473 - 5588 + | translation-associated GTPase TERM 15 5616 - 5646 + F 90 -8.4 -4.88222 | overlap 5617 AATTTGTTAACTTTT AGGTTAAGGATATT GTT ATTATCCTTAACCA TTTTTGCGTTTTAAT TERM 16 5617 - 5645 + F 91 -11.9 -3.51307 | overlap 5616 ATTTGTTAACTTTTA GGTTAAGGATATT GTT ATTATCCTTAACC ATTTTTGCGTTTTAA pth 5672 - 6247 + | peptidyl-tRNA hydrolase mfd 6244 - 9741 + | transcription-repair coupling factor TERM 17 9915 - 9931 + F 100 -10.9 -5.14645 | opp_overlap 9911 9915 ATTTGAGAGAATTAA GAGAGCT ATT AGCTCTC TTTTTGTTACATTAT TERM 18 9931 - 9915 - f 87 -10.9 -3.49886 | opp_overlap 9915, overlap 9911 ATTTGAGAGAATTAA GAGAGCT ATT AGCTCTC TTTTTGTTACATTAT SAK_0009 10032 - 10304 + | S4 domain-containing protein SAK_0010 10291 - 10662 + | hypothetical protein SAK_0011 10665 - 10799 + | hypothetical protein TERM 19 11559 - 11546 - g 76 -6.7 -4.42667 | GTAAAATTAGGAAAA CTGTC ATTG GACAG CAAATTTGAATACAA SAK_0012 10799 - 12085 + | hypothetical protein TERM 20 12997 - 12982 - g 78 -5.4 -4.95155 | opp_overlap 12982 TTCATATTACAAAAA TCCATC CTAA GACGGA TAGTTTTAAGGTTGA tilS 12087 - 13361 + | tRNA(Ile)-lysidine synthetase hpt 13366 - 13908 + | hypoxanthine-guanine phosphoribosyltransferase TERM 21 14420 - 14437 + G 72 -7.7 -3.73775 | GGCGGTGGCGGTGGC GCTCGTG GTGC CATGAGC TTTGGTAAAAATAAA TERM 22 14548 - 14534 - g 73 -8.6 -3.35762 | overlap 14528 AAGCAAGAATTAATA GAAGTC GTT GACTTC CTTAAAGATCCTAAA TERM 23 14963 - 14973 + G 73 -6.8 -4.25283 | GATCCCGCATTACTG CGTC CAG GACG TTTTGATAGAAAAGT ftsH 13931 - 15907 + | cell division protein FtsH TERM 24 15946 - 15978 + F 100 -14.4 -5.252 | opp_overlap 15939 15946 TTTATAAATTTCAAA CACCCTTCAAATTT AGATA AAATTTGAGGGGTG TTTTTTATGAAGATG TERM 25 15978 - 15946 - f 95 -12.2 -3.74347 | opp_overlap 15946, overlap 15939 TTTATAAATTTCAAA CACCCTTCAAATTT AGATA AAATTTGAGGGGTG TTTTTTATGAAGATG TERM 26 16379 - 16363 - f 83 -6.6 -4.89605 | CAAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 27 16393 - 16383 - f 79 -6.8 -4.61868 | overlap 16385 16390 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 28 17414 - 17427 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 29 18516 - 18497 - f 95 -12.2 -3.62096 | opp_overlap 18496 18495 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 30 21798 - 21778 - f 71 -8.3 -3.31263 | opp_overlap 21793, overlap 21780 AGTTCAGTGGTAGAA CATCACCTT GCC AAGGTGAGG GTCGCGGGTTCGAAC TERM 31 21796 - 21780 - f 78 -9.5 -3.22475 | opp_overlap 21793, overlap 21778 TTCAGTGGTAGAACA TCACCTT GCC AAGGTGA GGGTCGCGGGTTCGA TERM 32 22211 - 22195 - f 83 -6.6 -4.89605 | CAAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 33 22225 - 22215 - f 79 -6.8 -4.61868 | overlap 22217 22222 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 34 23246 - 23259 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 35 24348 - 24329 - f 95 -12.2 -3.62096 | opp_overlap 24328 24327 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 36 27630 - 27610 - f 71 -8.3 -3.31263 | opp_overlap 27625, overlap 27612 AGTTCAGTGGTAGAA CATCACCTT GCC AAGGTGAGG GTCGCGGGTTCGAAC TERM 37 27628 - 27612 - f 78 -9.5 -3.22475 | opp_overlap 27625, overlap 27610 TTCAGTGGTAGAACA TCACCTT GCC AAGGTGA GGGTCGCGGGTTCGA TERM 38 28489 - 28474 - f 93 -9 -4.75518 | opp_overlap 28485 TACATAAAAGTAAAA CCAAGC ATTT GCTTGG GCGCGTAGCTCAGGT TERM 39 28681 - 28694 + F 95 -5.3 -6.04953 | ATATTATAATTTTAA GAGTA ATTA TACTC TTTTTTTATTTCTCT pcsB 28898 - 30199 + | PcsB protein TERM 40 30191 - 30248 + F 71 -8 -3.18088 | opp_overlap 30210, overlap 30210 GTTTACTATATTTAC CCAAATTAATGAATACTAAGGAGATC TTTCGT GGTCTCCTTTTTGTTTATTAATTAGG TATGGTTTATTTTGG TERM 41 30210 - 30229 + F 86 -5.7 -5.48514 | opp_overlap 30210, overlap 30191 ATTAATGAATACTAA GGAGATC TTTCGT GGTCTCC TTTTTGTTTATTAAT TERM 42 30766 - 30776 + G 74 -8.2 -3.65581 | CGTTGATCACCTTAT GGGG GCT CCCC TTATTGCAGATTACT prs 30323 - 31291 + | ribose-phosphate pyrophosphokinase TERM 43 31328 - 31284 - f 100 -16.9 -3.23094 | opp_overlap 31289 31299, overlap 31289 31299 TTGAAATGAATAAAC TAAAATGACAAAAAACCTGTT ATT AACAGGTTTTTTATCATTTAA TGACGGAAAACTGGA TERM 44 31289 - 31323 + F 100 -14.6 -3.72576 | opp_overlap 31284 31289 31299, overlap 31299 ATGAATAAACTAAAA TGACAAAAAACCTGTT ATT AACAGGTTTTTTATCA TTTAATGACGGAAAA TERM 45 31323 - 31289 - f 100 -16.8 -4.68846 | opp_overlap 31289 31299, overlap 31284 31299 ATGAATAAACTAAAA TGACAAAAAACCTGTT ATT AACAGGTTTTTTATCA TTTAATGACGGAAAA TERM 46 31313 - 31299 - f 100 -8.6 -5.4588 | opp_overlap 31289 31299, overlap 31289 31284 TAAAATGACAAAAAA CCTGTT ATT AACAGG TTTTTTATCATTTAA TERM 47 31299 - 31313 + F 100 -8.6 -5.42265 | opp_overlap 31299 31289 31284, overlap 31289 TAAAATGACAAAAAA CCTGTT ATT AACAGG TTTTTTATCATTTAA SAK_0052 31399 - 32574 + | aromatic amino acid aminotransferase recO 32564 - 33325 + | DNA repair protein RecO TERM 48 33361 - 33336 - f 78 -9.1 -3.38581 | opp_overlap 33337, overlap 33334 33337 33340 ATTAAGTTGTAAAGA GGAACATGACA TTAG TGTCATGTTCT TTTTTTTAATATTAG TERM 49 33360 - 33337 - f 89 -12.6 -2.62667 | opp_overlap 33337, overlap 33336 33334 33340 TTAAGTTGTAAAGAG GAACATGACA TTAG TGTCATGTTC TTTTTTTTAATATTA TERM 50 33337 - 33360 + F 100 -12.6 -5.94597 | opp_overlap 33336 33334 33337 33340 TTAAGTTGTAAAGAG GAACATGACA TTAG TGTCATGTTC TTTTTTTTAATATTA TERM 51 33357 - 33340 - f 76 -8.5 -3.45839 | opp_overlap 33337, overlap 33337 33336 33334 AGTTGTAAAGAGGAA CATGACA TTAG TGTCATG TTCTTTTTTTTAATA SAK_0054 33415 - 34266 + | CAAX amino terminal protease family protein plsX 34344 - 35336 + | putative glycerol-3-phosphate acyltransferase PlsX SAK_0056 35347 - 35586 + | acyl carrier protein TERM 52 35597 - 35619 + F 81 -2.1 -6.07969 | opp_overlap 35597 AGTAATAATAAAAAG GAAGAAA ATACGAACG TTTCTTC TTTTTTTTGATTTTA TERM 53 35693 - 35679 - f 72 -7.2 -3.7941 | TATGTGTTAGAATAA CTCTTA AAA TAAGAG AAAGGCGAATAATCA purC 35710 - 36417 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 54 37143 - 37159 + G 71 -8.7 -3.13899 | overlap 37146 GCAGGGCTTGGCTAT GGAGGTC GAT GACCTTC TCTTCATCCAAGATT TERM 55 38343 - 38323 - g 71 -4.7 -4.66163 | ACTGTGACTGAAAAA CCAAATCTT GTC ATGACTTGG AATGGCGAAATCATC SAK_0058 36685 - 40296 + | phosphoribosylformylglycinamidine synthase purF 40530 - 41984 + | amidophosphoribosyltransferase TERM 56 42111 - 42090 - g 93 -3.8 -6.01369 | gap 1 GAAAGAATAAAAAAA CACGTTGCT CGTAC AG-AACGTG CGGGAGTCATGGGAG purM 42012 - 43034 + | phosphoribosylaminoimidazole synthetase TERM 57 43087 - 43059 - f 74 -9 -3.15008 | overlap 43057 TTTTATAAGAAAGGA GTGTTTAGTTAG TTTGC CTAACTGAACAC GGGATTAAATTTCTA purN 43202 - 43753 + | phosphoribosylglycinamide formyltransferase SAK_0062 43773 - 44525 + | acetyltransferase TERM 58 46059 - 46045 - g 76 -6.4 -4.42062 | opp_overlap 46044, overlap 46041 GACGCCGCAAACAAA CATGGC TTG ACCATG ATCTTCACAGGCGTG purH 44545 - 46092 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 59 46176 - 46195 + F 100 -7.2 -5.69023 | opp_overlap 46179 TATTAAACCTCCTAA GTACTCAT CAAG GTGAGTAC TTTTTTTGATATTTT zooA 46285 - 47184 + | zoocin A TERM 60 47685 - 47662 - g 79 -7.4 -4.50859 | opp_overlap 47676, overlap 47664 47675 47676 CAATGAAAATAGAAA CACCAGCAAC AAAT GCTGCTGGTC AAACAACAGCTACTG TERM 61 47683 - 47664 - g 85 -10 -3.83559 | opp_overlap 47676, overlap 47662 47675 47676 ATGAAAATAGAAACA CCAGCAAC AAAT GCTGCTGG TCAAACAACAGCTAC TERM 62 48123 - 48109 - g 86 -10 -4.13654 | CTCCTAAAGTAGAAA CTGGTG CAT CACCAG AGCATGTATCAGCTC TERM 63 48281 - 48269 - g 82 -7.7 -4.45068 | overlap 48253 AGCTTCAACAACAAA TGCAG TAG CTGCA CATCCTGAAAATGCA sip 47331 - 48635 + | group B streptococcal surface immunogenic protein TERM 64 48670 - 48636 - f 74 -6.8 -4.22554 | gap 1, opp_overlap 48636 48646 48667 TCATTTAACAAATAA TATAAAAAAGGAAGC TATTTG GCTTC-TTTTTTATA TGCCTTGCATAGACT TERM 65 48646 - 48661 + F 84 -5.4 -5.38951 | opp_overlap 48636, overlap 48636 AATAATATAAAAAAG GAAGCT ATTT GGCTTC TTTTTTATATGCCTT TERM 66 49334 - 49322 - g 78 -6.3 -4.8143 | opp_overlap 49324 TGAAGAAGGCAAAAA TGCTT TTG AAGCA GGAGTTGATTTTGTG SAK_0066 48882 - 49580 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 67 49921 - 49933 + G 74 -4.8 -4.72272 | opp_overlap 49912 ATTGAAGCAGGGACA GCAC CTGAT GTGC TTTTTGATGCACCAG TERM 68 50844 - 50825 - g 75 -8.6 -3.54543 | opp_overlap 50824 ATGGATTTTCTGAAA TGAGAACC TTAT GGTTCCCA ATGGTTCAATCTGTA SAK_0067 49627 - 50943 + | carbohydrate ABC transporter periplasmic-binding protein TERM 69 50953 - 50994 + F 74 -5.4 -4.74801 | gap 1, opp_overlap 50945 AAATAATTAAGGAGA CTCCTTTTCTATGGTCAAT CACAT ATTGGG-ATAGAAGAGGAG TTTTTAGTCAAGTTA SAK_0068 51031 - 51918 + | carbohydrate ABC transporter permease SAK_0069 51928 - 52758 + | carbohydrate ABC transporter permease TERM 70 53083 - 53093 + G 73 -5.4 -4.54727 | overlap 53080 TTTATCAAGTGCTCA GAAG AGA CTTC TTTTGATTTGAGAGA SAK_0070 52771 - 53214 + | hypothetical protein SAK_0071 53234 - 53896 + | hypothetical protein SAK_0072 53893 - 54810 + | N-acetylneuraminate lyase, putative SAK_0073 54827 - 55708 + | ROK family protein SAK_0074 55716 - 56693 + | acetyl xylan esterase, putative TERM 71 56681 - 56713 + T 83 -10.8 -2.79968 | opp_overlap 56670 56686, overlap 56686 TCAATTTACAAAGCA AAAAATCGAGTAGA TTATT TCTACTCGATTTTC ATTTAGCGTTGAATA TERM 72 56708 - 56686 - T 100 -10.7 -5.42514 | opp_overlap 56681 56686 TTACAAAGCAAAAAA TCGAGTAGA TTATT TCTACTCGA TTTTCATTTAGCGTT TERM 73 56686 - 56708 + T 95 -10.7 -4.564 | opp_overlap 56686, overlap 56681 TTACAAAGCAAAAAA TCGAGTAGA TTATT TCTACTCGA TTTTCATTTAGCGTT SAK_0075 57519 - 56716 - | RpiR family phosphosugar-binding transcriptional regulator TERM 74 57692 - 57634 - H 73 -8 -3.45839 | opp_overlap 57643, overlap 57636 57643 57647 57650 57684 57685 AGTTTTAAATAGCAA TATGAAGGATTAATAACATAATATAT GTGAAGT ATATATTATGTTATTAATTTTTCAAA AAAGATGCAATAAAA TERM 75 57690 - 57636 - H 83 -10.6 -3.29837 | opp_overlap 57643, overlap 57634 57643 57647 57650 57684 57685 TTTTAAATAGCAATA TGAAGGATTAATAACATAATATAT GTGAAGT ATATATTATGTTATTAATTTTTCA AAAAAGATGCAATAA TERM 76 57683 - 57643 - H 88 -11.7 -2.85437 | opp_overlap 57643, overlap 57636 57634 57647 57650 TAGCAATATGAAGGA TTAATAACATAATATAT GTGAAGT ATATATTATGTTATTAA TTTTTCAAAAAAGAT TERM 77 57643 - 57683 + H 100 -13.1 -4.56775 | opp_overlap 57643 57636 57634 57647 57650 TAGCAATATGAAGGA TTAATAACATAATATATGT GAA GTATATATTATGTTATTAA TTTTTCAAAAAAGAT TERM 78 57679 - 57647 - H 71 -8.1 -3.30212 | opp_overlap 57643, overlap 57643 57636 57634 57650 AATATGAAGGATTAA TAACATAATATAT GTGAAGT ATATATTATGTTA TTAATTTTTCAAAAA purD 57802 - 59064 + | phosphoribosylamine--glycine ligase TERM 79 59115 - 59101 - f 93 -11.4 -3.72324 | TAGCGTCAGCAATAA GCGACC GAA GGTCGC TCCAAAAAGAAAGAA TERM 80 59184 - 59197 + F 71 -6.7 -3.96291 | AGATAAATCTTCCTA GATGC TAAA GCATC TTTGTCAGATTTCTG purE 59350 - 59838 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 59825 - 60916 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 81 61334 - 61323 - g 70 -3 -5.13521 | overlap 61314 61312 AAAGTATTGAAAAAA GAAA GTTT TTTC AATGAAGTTGTTATT TERM 82 61705 - 61695 - g 75 -5.4 -4.75288 | TTATACCAAAATAAA TCTG TTA CAGA ACCCTTCCTATTAAA SAK_0079 60969 - 62360 + | hypothetical protein purB 62382 - 63680 + | adenylosuccinate lyase TERM 83 63729 - 63681 - f 93 -9.9 -4.56153 | opp_overlap 63686, overlap 63686 GGATTAGAAAAATAA GAAAATTCCATTGCCGGTTAA CGTTTTT TTAACCAGTAATGGAATTTTT ATTGATTTAAAAGGA TERM 84 63686 - 63724 + F 100 -9.8 -5.24551 | opp_overlap 63686 63681 AGAAAAATAAGAAAA TTCCATTGCCGGTTAA CGTTTTT TTAACCAGTAATGGAA TTTTTATTGATTTAA TERM 85 63724 - 63686 - f 100 -9.8 -5.18715 | opp_overlap 63686, overlap 63681 AGAAAAATAAGAAAA TTCCATTGCCGGTTAA CGTTTTT TTAACCAGTAATGGAA TTTTTATTGATTTAA SAK_0081 63833 - 64741 + | DNA-binding protein TERM 86 64774 - 64739 - f 80 -9.2 -3.6336 | opp_overlap 64744, overlap 64744 GCAGACTATATAGAA TAAAACTATCATGACA CTAG TGTCATGTTAGTTTTT TATTTTTAAATTTAT TERM 87 64769 - 64744 - f 93 -9.1 -4.87592 | opp_overlap 64744, overlap 64739 CTATATAGAATAAAA CTATCATGACA CTAG TGTCATGTTAG TTTTTTATTTTTAAA TERM 88 64744 - 64769 + F 100 -9.1 -5.93252 | opp_overlap 64739 64744 CTATATAGAATAAAA CTATCATGACA CTAG TGTCATGTTAG TTTTTTATTTTTAAA ruvB 64942 - 65940 + | Holliday junction DNA helicase B TERM 89 65954 - 65978 + F 100 -8.7 -5.48054 | AAAACATAAGTCATT TTAAGGCTAGG GTA TCTAGTCTTAA TTTTTTAATTTTCAT SAK_0083 66092 - 66529 + | low molecular weight phosphotyrosine protein phosphatase SAK_0084 66536 - 66916 + | MORN repeat-containing protein TERM 90 67390 - 67379 - g 71 -4.4 -4.72272 | GGCTCTTATCAAAAA GATC AAAA GATC AAAAGCAATTGAGGG SAK_0085 66913 - 68691 + | hypothetical protein TERM 91 68684 - 68668 - f 76 -6.5 -4.69027 | overlap 68669 AAAGCTATTCAAAAA TCAGCTC AAC GAGCTGC AAAATAAACAAGTCC TERM 92 68683 - 68669 - f 84 -10 -3.40331 | overlap 68668 AAGCTATTCAAAAAT CAGCTC AAC GAGCTG CAAAATAAACAAGTC TERM 93 68697 - 68715 + F 83 -4.5 -5.60993 | opp_overlap 68696 68697 68693 68698, overlap 68698 TGCAAAATAAACAAG TCCGAGT CATGT ACTCGGC TTTTTTTGTGAAAAC TERM 94 68698 - 68714 + F 77 -8 -3.95873 | opp_overlap 68698 68696 68697 68693, overlap 68697 GCAAAATAAACAAGT CCGAGT CATGT ACTCGG CTTTTTTTGTGAAAA TERM 95 68878 - 68858 - f 75 -2.6 -5.54264 | opp_overlap 68858 68858 68871, overlap 68859 AAAGATTGAAAAAAA GTTCACAA AAAAG TTGTGAAA CTATTTACAAAGTTT TERM 96 69624 - 69640 + G 78 -8.7 -3.66288 | GCCCTTGGTGTAGGT GCTGGGA ATG TTCCAGC TTATGTTGAAAAATC SAK_0086 68961 - 71603 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 97 71611 - 71644 + F 80 -9.7 -3.54459 | opp_overlap 71618, overlap 71618 GTAAGTAACAACAGT CGAAGAATCTCACTC TATT GAGTGGGATTTTTAG TTTCAAAAAGATTAA TERM 98 71618 - 71637 + F 95 -8.6 -4.98531 | opp_overlap 71618, overlap 71611 ACAACAGTCGAAGAA TCTCACTC TATT GAGTGGGA TTTTTAGTTTCAAAA SAK_0087 71782 - 72798 + | alcohol dehydrogenase TERM 99 72837 - 72814 - f 100 -14 -3.17688 | opp_overlap 72814, overlap 72802 TAATGATGTTACGAA CCCCCTTTAT TTTA ATAAAGGGGG TTGATTATATAACGA TERM 100 72814 - 72837 + F 100 -14 -3.49618 | opp_overlap 72814 72802 TAATGATGTTACGAA CCCCCTTTAT TTTA ATAAAGGGGG TTGATTATATAACGA thrC 72918 - 74408 + | threonine synthase TERM 101 75392 - 75382 - g 85 -4 -5.67063 | TGTAGGACAAAAAAA TAGA GAA TCTA TAGAGGAAACTATTC SAK_0089 74513 - 75793 + | MATE efflux family protein TERM 102 75789 - 75808 + F 100 -7.2 -5.40072 | opp_overlap 75789 GATATATTCAAAAAA TGTAACCA GAAA TGGTTGCA TTTTTTTGAAAAAAA TERM 103 75808 - 75789 - f 79 -5 -5.14477 | opp_overlap 75789 GATATATTCAAAAAA TGTAACCA GAAA TGGTTGCA TTTTTTTGAAAAAAA rpsJ 75998 - 76306 + | 30S ribosomal protein S10 rplC 76411 - 77037 + | 50S ribosomal protein L3 rplD 77061 - 77684 + | 50S ribosomal protein L4 rplW 77684 - 77980 + | 50S ribosomal protein L23 rplB 77998 - 78831 + | 50S ribosomal protein L2 TERM 104 79035 - 79017 - g 83 -2.4 -5.83211 | GACGAAAAGAAAAAA GTAATCAA AAC TTGGTCAC GTCGTTCAACGATTT rpsS 78930 - 79208 + | 30S ribosomal protein S19 TERM 105 79266 - 79288 + G 83 -9.2 -3.86106 | overlap 79257 ATGGCTCGTACAGTG CGTGTTTCAC CTC GTAAAACACG TTTAGTACTTGATCT rplV 79224 - 79568 + | 50S ribosomal protein L22 rpsC 79581 - 80234 + | 30S ribosomal protein S3 rplP 80238 - 80651 + | 50S ribosomal protein L16 rpmC 80661 - 80867 + | 50S ribosomal protein L29 rpsQ 80893 - 81153 + | 30S ribosomal protein S17 rplN 81178 - 81546 + | 50S ribosomal protein L14 TERM 106 81569 - 81586 + F 86 -11.3 -2.64274 | opp_overlap 81566 81562, overlap 81566 81566 TTAACAAACGTAGTC CCCTAGG ATTT CCTAGGG TGCCTTTCGAGGCGT rplX 81626 - 81931 + | 50S ribosomal protein L24 TERM 107 81927 - 81911 - f 74 -2.2 -5.55769 | opp_overlap 81911 CGTTACAACAAAAAA TCAGGC GAAGT GCTTGA TTAATCACGAAGGAA rplE 81955 - 82497 + | 50S ribosomal protein L5 rpsN 82515 - 82700 + | 30S ribosomal protein S14 rpsH 82855 - 83253 + | 30S ribosomal protein S8 rplF 83363 - 83899 + | 50S ribosomal protein L6 rplR 84000 - 84356 + | 50S ribosomal protein L18 rpsE 84375 - 84869 + | 30S ribosomal protein S5 rpmD 84884 - 85063 + | 50S ribosomal protein L30 TERM 108 85076 - 85099 + F 73 -8.2 -3.54741 | opp_overlap 85076 85069 TAATTAAATGCTAAA TCGCACTGAT TGTT ATTGGTGCGA TTTAAACAAATCGTA rplO 85188 - 85628 + | 50S ribosomal protein L15 secY 85649 - 86953 + | preprotein translocase subunit SecY TERM 109 86951 - 86986 + F 74 -4.2 -5.1675 | gap 1, opp_overlap 86956 86958 86960, overlap 86956 86957 86960 ATGAATACAACAGAA TAGAATATA-GGTTGAC TCT GTCAACCTTCTATTTTG TTTTTTAATAAGTCC TERM 110 86956 - 86981 + F 77 -4.1 -5.45813 | gap 1, opp_overlap 86956 86958 86960, overlap 86951 86957 86960 TACAACAGAATAGAA TATA-GGTTGAC TCT GTCAACCTTCTA TTTTGTTTTTTAATA TERM 111 86978 - 86958 - f 73 -8.3 -3.49582 | opp_overlap 86957 86956 86951 86960, overlap 86956 86960 CAACAGAATAGAATA TAGGTTGAC TCT GTCAACCTT CTATTTTGTTTTTTA TERM 112 86976 - 86960 - f 85 -10.9 -3.30171 | opp_overlap 86957 86956 86951 86960, overlap 86958 86956 ACAGAATAGAATATA GGTTGAC TCT GTCAACC TTCTATTTTGTTTTT TERM 113 86960 - 86976 + F 100 -10.9 -4.1922 | opp_overlap 86960 86958 86956, overlap 86957 86956 86951 ACAGAATAGAATATA GGTTGAC TCT GTCAACC TTCTATTTTGTTTTT TERM 114 86999 - 87017 + F 72 -6 -4.41348 | opp_overlap 86999, overlap 86995 TTGTTTTTTAATAAG TCCGACAT GCT GTGTTGGA TTTATTTAAAAACAA adk 87048 - 87686 + | adenylate kinase TERM 115 87720 - 87691 - f 78 -9.5 -3.20126 | opp_overlap 87690 87697 87715, overlap 87684 87688 87689 87715 AACTCAAATAAATTA TGCTAATCTACTT GCAT AAGTAGATTAGTA ATGATATACTAAGTT infA 87802 - 88020 + | translation initiation factor IF-1 rpsM 88180 - 88545 + | 30S ribosomal protein S13 rpsK 88563 - 88946 + | 30S ribosomal protein S11 rpoA 88996 - 89934 + | DNA-directed RNA polymerase subunit alpha rplQ 89949 - 90335 + | 50S ribosomal protein L17 TERM 116 90505 - 90456 - f 100 -13.1 -3.24021 | opp_overlap 90456 90459 TTGTTAAATAGGTAA CGCTTGTTTACGAAATGCAAACA ATTT TGTTTATATTTCGTAAGCAGGCG TTTTATGTATTATAT TERM 117 90456 - 90505 + F 100 -17.5 -4.72127 | opp_overlap 90456, overlap 90459 TTGTTAAATAGGTAA CGCTTGTTTACGAAATGCAAACA ATTT TGTTTATATTTCGTAAGCAGGCG TTTTATGTATTATAT TERM 118 90459 - 90479 + F 72 -3.3 -5.13648 | opp_overlap 90456, overlap 90456 TTAAATAGGTAACGC TTGTTTACG AAA TGCAAACAA TTTTGTTTATATTTC TERM 119 90900 - 90884 - f 83 -6.6 -4.89605 | CAAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 120 90914 - 90904 - f 79 -6.8 -4.61868 | overlap 90906 90911 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 121 91935 - 91948 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 122 93039 - 93020 - f 95 -12.2 -3.62096 | opp_overlap 93019 93018 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 123 97106 - 97116 + F 70 -8.2 -3.00525 | CGTGCCGGTTCGACC CCGG CCG CCGG TATACTTTAAAAGAC TERM 124 97129 - 97150 + F 100 -11.7 -5.5208 | opp_overlap 97129 CGGTATACTTTAAAA GACAAGGTT TCTA AACCTTGTC TTTTTTGTATTGTAC TERM 125 97150 - 97129 - f 100 -11.7 -4.16943 | opp_overlap 97129 CGGTATACTTTAAAA GACAAGGTT TCTA AACCTTGTC TTTTTTGTATTGTAC SAK_0137 97532 - 97963 + | putative lipoprotein SAK_0138 98033 - 98203 + | hypothetical protein SAK_0139 99119 - 99670 + | hypothetical protein SAK_0140 99890 - 100309 + | hypothetical protein TERM 126 100319 - 100360 + F 100 -19.2 -3.11812 | opp_overlap 100329, overlap 100329 CATTGATTGTGTCAT CATATAAAAAGCTTGAGA TGATAC TCTCAAGCTTTTTATATG TTAACTAATATGAGT TERM 127 100329 - 100350 + F 95 -8.8 -5.10064 | opp_overlap 100329, overlap 100319 GTCATCATATAAAAA GCTTGAGA TGATAC TCTCAAGC TTTTTATATGTTAAC TERM 128 100350 - 100329 - f 95 -8.8 -5.00895 | opp_overlap 100329 100319 GTCATCATATAAAAA GCTTGAGA TGATAC TCTCAAGC TTTTTATATGTTAAC comX 100509 - 100988 + | competence-specific sigma factor ComX TERM 129 100999 - 101021 + F 100 -8.5 -5.60993 | ATTAATCGATTTTAT TTCTGCAGT AGATA GCTGCAGAA TTTTTTTATAAGGAA TERM 130 101183 - 101195 + G 72 -7.7 -3.70076 | GTCGCGCTCAGGGGT GGAGT GAT ACTCC TTTAACTACCTTTGG SAK_0142 101110 - 101802 + | phosphoglycerate mutase family protein SAK_0143 101799 - 102551 + | D-alanyl-D-alanine carboxypeptidase TERM 131 102715 - 102699 - g 73 -2.2 -5.38951 | AATTTATACAAAAAA TTGTGC CAGAT GCGCAA GATCTAGGAAAGTCG SAK_0144 102548 - 103123 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase family protein TERM 132 103154 - 103124 - f 77 -9.9 -2.62788 | opp_overlap 103126, overlap 103121 103129 AGATATGATAAGTGA TATTAGCACTCTT TGAAT AAGAGTGCTAATT TTTGATGTTTTTTCC TERM 133 103126 - 103152 + F 100 -12.5 -5.04265 | opp_overlap 103124 103121 103129 ATATGATAAGTGATA TTAGCACTCTT TGAAT AAGAGTGCTAA TTTTTGATGTTTTTT TERM 134 103149 - 103129 - f 74 -9.8 -2.67705 | opp_overlap 103126, overlap 103124 103121 TGATAAGTGATATTA GCACTCTT TGAAT AAGAGTGC TAATTTTTGATGTTT hrcA 103266 - 104300 + | heat-inducible transcription repressor grpE 104342 - 104875 + | co-chaperone protein GrpE dnaK 105056 - 106885 + | molecular chaperone DnaK TERM 135 107041 - 107065 + F 100 -12.1 -4.70169 | opp_overlap 107041 107043, overlap 107043 CATATTAATAATAAA TAGGCGGGGCG CCT CGCTCCGTCTG TTTTATTAAGTGTCA TERM 136 107043 - 107063 + F 100 -12.5 -3.96156 | opp_overlap 107041 107043, overlap 107041 TATTAATAATAAATA GGCGGGGCG CCT CGCTCCGTC TGTTTTATTAAGTGT TERM 137 107053 - 107043 - f 77 -8.2 -3.8457 | opp_overlap 107043 107041, overlap 107041 TATTAATAATAAATA GGCG GGG CGCC TCGCTCCGTCTGTTT dnaJ 107174 - 108289 + | co-chaperone protein DnaJ TERM 138 108328 - 108294 - f 91 -7.4 -5.14965 | opp_overlap 108299, overlap 108299 ATGTTGATTAAAAAA TAAAAGTCTAGAAT CGAAAGT ATTCTAGACTTTTT TGTATTGCTAGAGGG TERM 139 108323 - 108299 - f 100 -7.3 -5.45813 | opp_overlap 108299, overlap 108294 GATTAAAAAATAAAA GTCTAGAAT CGAAAGT ATTCTAGAC TTTTTTGTATTGCTA TERM 140 108299 - 108323 + F 100 -7.3 -5.49569 | opp_overlap 108299 108294 GATTAAAAAATAAAA GTCTAGAAT CGAAAGT ATTCTAGAC TTTTTTGTATTGCTA TERM 141 109620 - 109632 + G 72 -7.7 -3.66732 | AGTAAAAAATGATTC CTGCT TAA AGCAG TTCTTGGGATCGTTG SAK_0149 108403 - 109650 + | GntR family transcriptional regulator truA 109721 - 110497 + | tRNA pseudouridine synthase A SAK_0151 110460 - 111218 + | phosphomethylpyrimidine kinase SAK_0152 111228 - 111692 + | hypothetical protein SAK_0153 111689 - 112258 + | hypothetical protein TERM 142 112285 - 112261 - T 100 -15.9 -4.24002 | opp_overlap 112261 112265, overlap 112265 CCGTAAATTTTAAAA TAAACCTCTGC TAT GCAGAGGTTTA TTGTTTATCTCAACG TERM 143 112261 - 112285 + T 100 -15.9 -4.14627 | opp_overlap 112261 112265, overlap 112265 CCGTAAATTTTAAAA TAAACCTCTGC TAT GCAGAGGTTTA TTGTTTATCTCAACG TERM 144 112281 - 112265 - T 100 -12.3 -4.69559 | opp_overlap 112261 112265, overlap 112261 AAATTTTAAAATAAA CCTCTGC TAT GCAGAGG TTTATTGTTTATCTC TERM 145 112265 - 112281 + T 100 -12.3 -4.65458 | opp_overlap 112265 112261, overlap 112261 AAATTTTAAAATAAA CCTCTGC TAT GCAGAGG TTTATTGTTTATCTC SAK_0154 113137 - 112295 - | hypothetical protein tig 113294 - 114577 + | trigger factor TERM 146 114593 - 114621 + F 100 -11.9 -4.16767 | opp_overlap 114599 114602, overlap 114599 TTGCTTATTAAATTT TGAAAAGATTGGG CTT CCCAGTCTTTTTA TTTGTGATTATTCTT TERM 147 114615 - 114599 - f 70 -6.5 -4.17491 | opp_overlap 114593 114599, overlap 114602 ATTAAATTTTGAAAA GATTGGG CTT CCCAGTC TTTTTATTTGTGATT TERM 148 114599 - 114615 + F 100 -8.7 -5.4182 | opp_overlap 114599 114602, overlap 114593 ATTAAATTTTGAAAA GATTGGG CTT CCCAGTC TTTTTATTTGTGATT rpoE 114766 - 115341 + | DNA-directed RNA polymerase subunit delta TERM 149 115417 - 115440 + F 91 -7.4 -5.26119 | opp_overlap 115419, overlap 115419 TTATGAGGTCAGATA AAGCTCCCTA GTGA TAGGGGGCTA TTTTGTTTTTGGGAA TERM 150 115419 - 115438 + F 93 -10 -4.25502 | opp_overlap 115419, overlap 115417 ATGAGGTCAGATAAA GCTCCCTA GTGA TAGGGGGC TATTTTGTTTTTGGG TERM 151 115438 - 115419 - f 77 -7.8 -4.053 | opp_overlap 115419 115417 ATGAGGTCAGATAAA GCTCCCTA GTGA TAGGGGGC TATTTTGTTTTTGGG pyrG 115614 - 117218 + | CTP synthetase TERM 152 117224 - 117247 + F 100 -11 -5.55855 | opp_overlap 117220 117219 TATGAAATAACTTTA TCGCCTCCCA GTAT TAGGAGGCGA TTTTATTTTTTTAGA SAK_0158 117327 - 118253 + | hypothetical protein TERM 153 118413 - 118391 - f 87 -12.1 -2.62184 | opp_overlap 118391 TCTCTCCGCAGACTA GTCGAGTTC ATTTG GAACTCGAC TTTTTGCATATTTAA TERM 154 118391 - 118413 + F 100 -12.1 -4.77986 | opp_overlap 118391 TCTCTCCGCAGACTA GTCGAGTTC ATTTG GAACTCGAC TTTTTGCATATTTAA dut 118448 - 118894 + | deoxyuridine 5'-triphosphate nucleotidohydrolase radA 119056 - 120420 + | DNA repair protein RadA TERM 155 120427 - 120445 + F 100 -9.6 -5.14563 | opp_overlap 120424 120429 TCAACATAATGATTA GATTCGGT TCA GCCGAATC TTTTTTGGTGGCGAG SAK_0162 120556 - 121053 + | carbonic anhydrase, putative SAK_0163 121207 - 122526 + | pyridine nucleotide-disulfide oxidoreductase TERM 156 122542 - 122561 + T 100 -7.2 -5.60993 | opp_overlap 122542, overlap 122512 GAATATTTTTAAAAA GTAAGGCA ATTT TGCTTTAC TTTTTTTATCGAAAA TERM 157 122679 - 122645 - T 95 -8.6 -5.30199 | opp_overlap 122645 AAAAACCAATAAAAA CCAACGAAAATCCGTC TCA GACTAAGTTCCGTTGG TTTTTATAATACTTG TERM 158 122645 - 122679 + T 70 -4.2 -4.94902 | opp_overlap 122645 AAAAACCAATAAAAA CCAACGAAAATCCGTC TCA GACTAAGTTCCGTTGG TTTTTATAATACTTG TERM 159 122753 - 122769 + T 71 -8.1 -3.1875 | opp_overlap 122748 122747, overlap 122761 AAGAAAACATCCTCA TCTGAAA GCG TTTCAGA TTAAGTTCCGCTATG SAK_0164 123999 - 122833 - | ISSag9, transposase gltX 124303 - 125739 + | glutamyl-tRNA synthetase TERM 160 125771 - 125742 - T 87 -10.9 -3.42359 | opp_overlap 125742 125748, overlap 125734 125748 AGCAAAATTATAATA TAAAAAGTCGTGA ATTT TCACGACTTTTTG TGTACTTTTACCAAT TERM 161 125742 - 125771 + T 100 -13.1 -3.10091 | opp_overlap 125734 125742 125748, overlap 125748 AGCAAAATTATAATA TAAAAAGTCGTGA ATTT TCACGACTTTTTG TGTACTTTTACCAAT TERM 162 125765 - 125748 - T 100 -9.9 -5.16133 | opp_overlap 125742 125748, overlap 125742 ATTATAATATAAAAA GTCGTGA ATTT TCACGAC TTTTTGTGTACTTTT TERM 163 125748 - 125765 + T 100 -9.9 -5.07941 | opp_overlap 125748 125742, overlap 125742 ATTATAATATAAAAA GTCGTGA ATTT TCACGAC TTTTTGTGTACTTTT rbsB 126747 - 125779 - | ribose ABC transporter, ribose-binding protein rbsC 127732 - 126800 - | ribose ABC transporter, permease protein rbsA 129221 - 127743 - | ribose ABC transporter, ATP-binding protein TERM 164 128105 - 128119 + g 90 -8.6 -4.67552 | opp_overlap 128100, overlap 128100 128097 GATTAATCAATTGTT GCACAA ATG TTGTGC TTGTTTTTTCATCAA TERM 165 128202 - 128216 + g 76 -5 -4.90471 | opp_overlap 128196, overlap 128196 GATATTGAAGTCTAG GATGAG ACC TTCATC TTTTCTATTTTCGGT TERM 166 128267 - 128239 - G 72 -3.8 -5.00616 | gap 1 TTTTCGGTCAAAAAA CCAATGCCCTGCT TGAT AGCTTGGC-TTGG GCTAGTAATAGTGAT rbsD 129635 - 129237 - | D-ribose pyranase TERM 167 129585 - 129610 + gr 84 -9.9 -3.5032 | gap 1, overlap 129583 ATCAGTATGCCCAAG GTCATCT-GCTA ATT TAGCGAGATGAC TATTTAATATGCCAG rbsK 130521 - 129610 - | ribokinase rbsR 131500 - 130514 - | ribose operon repressor TERM 168 131591 - 131609 + H 82 -7.6 -4.60487 | opp_overlap 131594 ATTTTTTAAATAATT TAATGATA AAA TATCATTA TTTTTAGAGGTCATA TERM 169 132745 - 132733 - g 76 -7.7 -4.14013 | opp_overlap 132732 132728 TAAAAGTTGCTAAAA TCGAC CCA GTCGA AGTTATTAATGGGGG SAK_0172 131682 - 132770 + | permease, putative SAK_0173 132770 - 133456 + | ABC transporter, ATP-binding protein SAK_0174 133487 - 134158 + | DNA-binding response regulator TERM 170 134309 - 134322 + G 71 -4.5 -4.79949 | TCATGTATTACAAGT TAGCG CTCT CGCTG TTGTTTTTTTAAGCC SAK_0175 134151 - 135221 + | sensor histidine kinase TERM 171 135227 - 135262 + F 100 -19.4 -4.42806 | opp_overlap 135232, overlap 135232 CTTATCATAATTATT TAAAACAATAACTGCC AATT GGCAGTTATTGTTTTA TTTATTTAGAAATAA TERM 172 135257 - 135232 - f 100 -14.9 -4.24963 | opp_overlap 135227 135232 CATAATTATTTAAAA CAATAACTGCC AATT GGCAGTTATTG TTTTATTTATTTAGA TERM 173 135232 - 135257 + F 100 -14.9 -5.18866 | opp_overlap 135232, overlap 135227 CATAATTATTTAAAA CAATAACTGCC AATT GGCAGTTATTG TTTTATTTATTTAGA argG 135375 - 136565 + | argininosuccinate synthase argH 136584 - 137972 + | argininosuccinate lyase fba 138113 - 138994 + | fructose-bisphosphate aldolase TERM 174 139022 - 139038 + T 100 -8.7 -5.55698 | opp_overlap 139022 AGATAATAGTTAAAA GCTCACT TAT GGTGAGC TTTTTTTGGATTATA TERM 175 139038 - 139022 - T 83 -8 -4.31043 | opp_overlap 139022 AGATAATAGTTAAAA GCTCAC TTATG GTGAGC TTTTTTTGGATTATA SAK_0179 139996 - 139079 - | L-2-hydroxyisocaproate dehydrogenase TERM 176 139350 - 139340 - G 73 -3.2 -5.14563 | TTTTTTACCAAAAAA GACA GTG TGCC CGCCTTTTAAAGAAG rpmB 140235 - 140423 + | 50S ribosomal protein L28 TERM 177 140479 - 140490 + F 74 -3 -5.44721 | GGCTGATTTGATAGT TAGA TACC TCTA TTTTTTTACAATAAT TERM 178 140726 - 140699 - g 72 -9.3 -2.74019 | opp_overlap 140699 140697 GATAACTTTCAAGCA CTTTTGCGTAA GGAAAA CTACGCAAAAG GTGTTGTTGTGAGGT SAK_0181 140555 - 140920 + | hypothetical protein SAK_0182 140953 - 142584 + | DAK2 domain-containing protein TERM 179 142583 - 142637 + F 95 -10.5 -4.49352 | opp_overlap 142585 142586 142594, overlap 142584 142585 142601 TCATGAGCGTTGAAT AATTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAGAG TTTCTATTTTAGTAT TERM 180 142584 - 142636 + F 100 -14 -3.27985 | opp_overlap 142585 142586 142594, overlap 142583 142585 142601 CATGAGCGTTGAATA ATTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAGA GTTTCTATTTTAGTA TERM 181 142585 - 142635 + F 100 -17.5 -2.55706 | opp_overlap 142585 142586 142594, overlap 142584 142583 142601 ATGAGCGTTGAATAA TTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAG AGTTTCTATTTTAGT TERM 182 142635 - 142585 - f 100 -13.1 -3.62775 | opp_overlap 142585 142584 142583 142601, overlap 142586 142594 ATGAGCGTTGAATAA TTGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCAG AGTTTCTATTTTAGT TERM 183 142634 - 142586 - f 100 -16.6 -2.77344 | opp_overlap 142585 142584 142583 142601, overlap 142585 142594 TGAGCGTTGAATAAT TGATAAAATAAAAAATTAGGAG AGATA CTTCTAATTTTTTATTTTATCA GAGTTTCTATTTTAG TERM 184 142626 - 142594 - f 85 -8 -4.50943 | opp_overlap 142585 142584 142583 142601, overlap 142586 142585 GAATAATTGATAAAA TAAAAAATTAGGAG AGATA CTTCTAATTTTTTA TTTTATCAGAGTTTC TERM 185 142601 - 142619 + F 86 -3.9 -5.86976 | opp_overlap 142594 142586 142585, overlap 142585 142584 142583 TGATAAAATAAAAAA TTAGGAG AGATA CTTCTAA TTTTTTATTTTATCA SAK_0183 142732 - 143616 + | SPFH domain-containing protein/band 7 family protein TERM 186 143627 - 143674 + F 100 -14.4 -3.16387 | opp_overlap 143633 143634 143639, overlap 143634 143639 GATAATGAACTTTTT ATAGAAGCAAAATAACCAGAGC ATTT GCTCTGGTTATTTTGTGTCTGA CTTATTTATTATAAT TERM 187 143668 - 143633 - f 100 -16.4 -3.494 | opp_overlap 143627 143634 143639, overlap 143634 143639 GAACTTTTTATAGAA GCAAAATAACCAGAGC ATTT GCTCTGGTTATTTTGT GTCTGACTTATTTAT TERM 188 143667 - 143634 - f 100 -19.9 -2.69319 | opp_overlap 143634 143627 143639, overlap 143633 143639 AACTTTTTATAGAAG CAAAATAACCAGAGC ATTT GCTCTGGTTATTTTG TGTCTGACTTATTTA TERM 189 143634 - 143667 + F 100 -19.9 -2.9924 | opp_overlap 143633 143634 143639, overlap 143627 143639 AACTTTTTATAGAAG CAAAATAACCAGAGC ATTT GCTCTGGTTATTTTG TGTCTGACTTATTTA TERM 190 143662 - 143639 - f 100 -14 -4.53034 | opp_overlap 143639 143634 143627, overlap 143634 143633 TTTATAGAAGCAAAA TAACCAGAGC ATTT GCTCTGGTTA TTTTGTGTCTGACTT TERM 191 143639 - 143662 + F 100 -14 -4.62471 | opp_overlap 143634 143633 143639, overlap 143634 143627 TTTATAGAAGCAAAA TAACCAGAGC ATTT GCTCTGGTTA TTTTGTGTCTGACTT TERM 192 143972 - 143961 - f 71 -2.2 -5.4756 | AAGTGCAACAAAAAA GACA TGCT CGTC TGATATACTAGAATT TERM 193 144410 - 144398 - g 81 -5.5 -5.14163 | opp_overlap 144398, overlap 144392 ACTTACCAAGAAAAA CCTCC ACT GGAAG TTATCCCTTCCACCA SAK_0184 144017 - 145039 + | ISSag3, transposase SAK_0185 145512 - 145294 - | hypothetical protein TERM 194 145525 - 145503 - G 95 -8.5 -4.87626 | opp_overlap 145503 145507, overlap 145507 CCTCAACATCAAAAA GAAAGGACA AAATG CGTCCTTTC TAGTTTGTAGCCTTG TERM 195 145521 - 145507 - G 70 -3.5 -4.95618 | opp_overlap 145507 145503, overlap 145503 AACATCAAAAAGAAA GGACA AAATG CGTCC TTTCTAGTTTGTAGC bag 149184 - 145690 - | IgA-binding beta antigen TERM 196 147506 - 147520 + g 80 -6.4 -4.77719 | TTGTCATTTGATTTT GGTTCT TGA GGAACC TTTTCTTCCGTTTTA SAK_0187 149791 - 149264 - | isoprenylcysteine carboxyl methyltransferase (ICMT) family protein TERM 197 149860 - 149889 + r 71 -8.7 -2.92653 | opp_overlap 149865, overlap 149865 TATGAACTATAACAA AAAAAGAACGGAG AGAT TTCCGTTCTTTTA CTTTATACAACTAAT TERM 198 149884 - 149865 - R 100 -7.9 -5.89921 | opp_overlap 149860 149865 ACTATAACAAAAAAA GAACGGA GAGATT TCCGTTC TTTTACTTTATACAA TERM 199 149865 - 149884 + r 89 -8.6 -4.61873 | opp_overlap 149865, overlap 149860 ACTATAACAAAAAAA GAACGGAG AGAT TTCCGTTC TTTTACTTTATACAA SAK_0188 151240 - 149900 - | sensor histidine kinase SAK_0189 151890 - 151237 - | DNA-binding response regulator SAK_0190 152483 - 152094 - | IS1381 transposase protein B SAK_0191 152899 - 152516 - | IS1381 transposase protein A SAK_0192 153170 - 153000 - | hypothetical protein TERM 200 153324 - 153266 - R 91 -10.3 -3.96483 | gap 1 AGCCCATTCAAACAA CATTTTTTAATTTTAAACAAATATATAA CTAA TTAAATATC-GCTTAAAATTAAAAAATG AGATTTAGTAACTTA SAK_0193 154251 - 153511 - | amino acid ABC transporter, ATP-binding protein, putative SAK_0194 155811 - 154261 - | His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease TERM 201 154528 - 154541 + g 73 -5.3 -4.652 | opp_overlap 154528 TATGTTACGTACAAC TTGTG GTAG CACAA TTTTTCGCATGGTTT TERM 202 156630 - 156620 - g 90 -4 -5.89921 | ATTACAAGAAAAAAA TTGA ACA TCAA GAGAAGATGATAGAG SAK_0195 155947 - 157821 + | hypothetical protein uppP 157867 - 158706 + | undecaprenyl pyrophosphate phosphatase TERM 203 158745 - 158714 - f 86 -9.7 -3.96506 | gap 1, opp_overlap 158722, overlap 158716 158722 TATTCTAAAATATAA CATAAAAAGCTGAG TATTC CTCAGCTTTTTA-G CGTGTTAGGCTGCGA TERM 204 158744 - 158716 - f 100 -13.4 -3.56378 | opp_overlap 158722, overlap 158714 158722 TTCTAAAATATAACA TAAAAAGCTGAG TATTC CTCAGCTTTTTA GCGTGTTAGGCTGCG TERM 205 158738 - 158722 - f 93 -8 -5.18995 | opp_overlap 158722, overlap 158716 158714 AATATAACATAAAAA GCTGAG TATTC CTCAGC TTTTTAGCGTGTTAG TERM 206 158722 - 158738 + F 85 -8 -4.66953 | opp_overlap 158722 158716 158714 AATATAACATAAAAA GCTGAG TATTC CTCAGC TTTTTAGCGTGTTAG TERM 207 158859 - 158842 - g 73 -5.6 -4.62772 | TGGAAATGAAACAAA TCAGTG AAACAA CACTGA AAATTACAATTAGTA TERM 208 158920 - 158942 + G 73 -3.4 -5.1764 | opp_overlap 158910 158913, overlap 158922 TGAAAGATTTCCTAA TCCCTCAG GAGAAGA CTGAGGAA TTTTTCTATTCTGTC TERM 209 159119 - 159131 + G 70 -3.4 -5.03145 | opp_overlap 159098 159119, overlap 159097 TGACATTTCAAAAAT GTCT CCAGA AGAC TTTTTTAAAACATTG SAK_0197 158826 - 159581 + | adaptor protein TERM 210 159765 - 159777 + G 73 -6.3 -4.47707 | overlap 159764 AATATTTCTCTCCTT TGTTG TAA CAACA TTATTTTTCATGCCA SAK_0198 159583 - 160743 + | glycosyl transferase family protein TERM 211 160762 - 160741 - f 78 -5.9 -4.8269 | opp_overlap 160746 160748, overlap 160746 GATAAGCATCAAAAA TAAAAGCCT GAAA AGGCTTTTT TAGTTTTAATCATTT TERM 212 160757 - 160746 - f 83 -5.8 -5.3104 | opp_overlap 160746 160748, overlap 160741 GCATCAAAAATAAAA GCCT GAAA AGGC TTTTTTAGTTTTAAT TERM 213 160746 - 160757 + F 86 -5.8 -5.48054 | opp_overlap 160746 160741, overlap 160748 GCATCAAAAATAAAA GCCT GAAA AGGC TTTTTTAGTTTTAAT sufC 160908 - 161678 + | FeS assembly ATPase SufC TERM 214 161949 - 161927 - g 85 -9.2 -4.01902 | overlap 161944 AGAGTTAGGAAACAA TCCCAAGTTG GTT CAAATTGGGA CCCAAACTGTCCTTG sufD 161715 - 162977 + | hypothetical protein sufS 162979 - 164211 + | cysteine desulfurase SufS SAK_0202 164198 - 164641 + | NifU family SUF system FeS assembly protein TERM 215 165894 - 165866 - g 76 -4.6 -5.10077 | opp_overlap 165867, overlap 165867 165869 AAAGATTCCAAAAAA TCAGTGTCACAT ATAGA ATGTGACACCAT ATTGATGGATGATAT TERM 216 165893 - 165867 - g 72 -8.1 -3.6442 | opp_overlap 165867, overlap 165866 165869 AAGATTCCAAAAAAT CAGTGTCACAT ATAGA ATGTGACACCA TATTGATGGATGATA TERM 217 165891 - 165869 - g 80 -10.7 -3.38726 | opp_overlap 165867, overlap 165867 165866 GATTCCAAAAAATCA GTGTCACAT ATAGA ATGTGACAC CATATTGATGGATGA sufB 164741 - 166159 + | hypothetical protein SAK_0204 167418 - 166231 - | D-alanyl-D-alanine carboxypeptidase TERM 218 166881 - 166891 + g 70 -8.2 -3.3164 | AAGCACTCGCTACCG CCCC ACT GGGG TTATAAAAGTGAGTT TERM 219 166923 - 166963 + g 75 -7 -4.35042 | TTGTCATACCGAGTT TCTTGGCGGTTTCATTGA TTCGT TTAATGAAGGCGTCAGGA TTGTTTTGTGATAAG TERM 220 167490 - 167461 - R 100 -7.4 -5.58179 | opp_overlap 167461 TATTATAACAAAAAA TCACTAATAAAA AAGACA TTTCATTAGTGA TTTTTAATTTTATAT TERM 221 167461 - 167490 + r 80 -5.2 -5.15526 | opp_overlap 167461 TATTATAACAAAAAA TCACTAATAAAA AAGACA TTTCATTAGTGA TTTTTAATTTTATAT TERM 222 167541 - 167531 - R 78 -6.8 -4.46514 | overlap 167532 ACCTAGCTAAAGAAA CTGC TGT GCAG CAACTCCTTGTGTCA SAK_0205 168806 - 167571 - | D-alanyl-D-alanine carboxypeptidase TERM 223 167750 - 167762 + g 79 -4.8 -5.10029 | CTTTTTTTGTAATAG GAGC AGTAA GCTC TTTTTTAAAGTTAAT TERM 224 170205 - 170164 - g 72 -3.8 -4.91285 | gap 1, opp_overlap 170195 ATGAATATAATAAAA CTGAAGCAGCAAAACTCTT TAAAG AAG-GTTTGGCTGAATCAG GCTTGACTAAGCTAA TERM 225 170256 - 170233 - g 70 -8.8 -3.0274 | overlap 170216 170230 170235 TAAAATTAACAATTA CAGCAGATGC TGAT GCTCCTGCTG CCAAAAACTCTGTTG SAK_0206 169047 - 170702 + | oligopeptide ABC transporter, oligopeptide-binding protein, putative TERM 226 170728 - 170755 + F 100 -11.4 -4.43477 | TTACACTAAACCTTT GCAAGAATTGGT AATT GCCAGTTCTTGC TTTTGGTTAAGTAAA oppD 170821 - 171735 + | oligopeptide ABC transporter, permease protein SAK_0208 171745 - 172776 + | oligopeptide ABC transporter, permease protein OppC, putative oppD 172789 - 173835 + | oligopeptide ABC transporter, ATP-binding protein TERM 227 173893 - 173856 - g 80 -2.4 -5.61824 | overlap 173860 GAAAATCGAAAAAAA TTAGTTGAA-GTCAAAAA TGTT TCTTTGACCTTCAA-TAA AGGAAAAGCTAATGA oppF 173835 - 174767 + | oligopeptide ABC transporter, ATP-binding protein TERM 228 174765 - 174789 + F 100 -10.2 -5.55664 | opp_overlap 174763 174765 174770, overlap 174770 174786 AAAAAACAAATATTA TAAAAGATGG CTAGC CCATCTTTTA TTTTTTTACTAATAA TERM 229 174789 - 174765 - f 81 -10.2 -3.05653 | opp_overlap 174765 174770 174786, overlap 174763 174770 AAAAAACAAATATTA TAAAAGATGG CTAGC CCATCTTTTA TTTTTTTACTAATAA TERM 230 174770 - 174784 + F 90 -5.7 -5.57888 | opp_overlap 174765 174763 174770, overlap 174765 ACAAATATTATAAAA GATGG CTAGC CCATC TTTTATTTTTTTACT TERM 231 174784 - 174770 - f 74 -5.7 -4.59207 | opp_overlap 174770 174765, overlap 174765 174763 ACAAATATTATAAAA GATGG CTAGC CCATC TTTTATTTTTTTACT TERM 232 175145 - 175129 - f 83 -6.6 -4.86216 | ACAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 233 175159 - 175149 - f 79 -6.8 -4.61868 | overlap 175151 175156 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 234 176180 - 176193 + F 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 235 177284 - 177265 - f 95 -12.2 -3.62096 | opp_overlap 177264 177263 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 236 180181 - 180198 + F 86 -4.1 -5.80364 | opp_overlap 180181, overlap 180183 GAGTAGATAAAGGGA GACTAAC TTTG GTTAGCC TTTTTTTATTGGAAT TERM 237 180606 - 180581 - g 70 -3.2 -4.95758 | overlap 180582 ATTAGATTAGAAAAA TCCATTCCTG TCTGTG CAGGACTGGG GGGTGGTTCTACTGA ispE 180308 - 181159 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 238 181640 - 181651 + G 71 -4.4 -4.82518 | AAAGGACGAAAAGGT CGTT TTAG AACG TTTTCTTGATCTTTT adcR 181245 - 181688 + | adc operon repressor AdcR adcC 181691 - 182401 + | zinc ABC transporter, ATP-binding protein adcB 182391 - 183203 + | zinc ABC transporter, permease protein TERM 239 183213 - 183233 + T 100 -7.7 -5.76237 | opp_overlap 183199 183213 CGTTAAATAAAAAAA TCTATCTTA TTC TAGGATAGA TTTTTTATTTATCTC TERM 240 183233 - 183213 - T 95 -5.5 -5.95539 | opp_overlap 183213, overlap 183199 CGTTAAATAAAAAAA TCTATCTTA TTC TAGGATAGA TTTTTTATTTATCTC TERM 241 183405 - 183380 - T 100 -14.1 -5.31275 | opp_overlap 183379 183378 183373 183382 TTTTAGGATAAAAAA TACTACCGGCA ATTT TGCCGGCAGTA AATTGTAATTATTGT TERM 242 183382 - 183403 + T 77 -10.1 -2.64462 | opp_overlap 183380, overlap 183379 183378 183373 TTAGGATAAAAAATA CTACCGGCA ATTT TGCCGGCAG TAAATTGTAATTATT SAK_0220 184445 - 183414 - | hypothetical protein TERM 243 184097 - 184085 - G 75 -9.1 -3.49076 | AAAATTGATAACCAA CGAGG TGA CCTCG GTCCATAAGCCAAGT TERM 244 184465 - 184495 + r 71 -5.6 -4.71401 | opp_overlap 184465 184468, overlap 184468 CTAAACCCTTCTAAA TGATATTTGTGAAG GCC TTTCACAAGTATAA TTTTATCATTTTATT TERM 245 184945 - 184982 + r 100 -16.7 -3.10876 | opp_overlap 184954, overlap 184954 AGGAATGTTGTTCAT TAATAAAAAGTGTAGTC AATT GACTACACTTTTTATTG TCTTGAAATATTATT TERM 246 184954 - 184973 + r 100 -10.8 -5.29716 | opp_overlap 184954, overlap 184945 GTTCATTAATAAAAA GTGTAGTC AATT GACTACAC TTTTTATTGTCTTGA TERM 247 184973 - 184954 - R 100 -10.8 -5.1356 | opp_overlap 184954 184945 GTTCATTAATAAAAA GTGTAGTC AATT GACTACAC TTTTTATTGTCTTGA tyrS 186283 - 185024 - | tyrosyl-tRNA synthetase TERM 248 185582 - 185596 + g 77 -2.8 -5.58454 | CCAAACAGCATTTCC TTCAGA TTT TCCGAA TTTTTTTCCTGTAGA TERM 249 188179 - 188149 - g 72 -8.4 -3.53012 | CGTGTCTTTTCGAAA GCAACAGCTACTAT CTT ACAGCAGCTATTAC ATGGACCAATTAACT SAK_0222 186394 - 188691 + | penicillin-binding protein 1B TERM 250 188722 - 188745 + F 100 -10.4 -5.42198 | GATAGTTTTATTTGA GGAGAATAGA GTGA TCTGTTCTCC TTTTATTTTTTCCAA TERM 251 189001 - 189037 + F 71 -6.8 -4.06182 | gap 1, opp_overlap 189001, overlap 188999 CGACCTAGATATACA GCAGTTAAATC-AACTT GATA AAGTGAGATTTAGCTGC TCTTTTTGTGCCTAA rpoB 189215 - 192790 + | DNA-directed RNA polymerase subunit beta TERM 252 193177 - 193165 - g 76 -7.7 -4.09739 | GTAACCCGTGCAAAA GTTCG TCG CGAAC GTATGGGACATATCG TERM 253 193580 - 193564 - g 72 -3.7 -5.0133 | GATGCCTTTAAAAAA TCTGG AAATAAA CCAGA ATGGATGGTTCTTAA rpoC 192907 - 196557 + | DNA-directed RNA polymerase subunit beta' TERM 254 196587 - 196565 - f 93 -9.2 -4.92777 | opp_overlap 196565 196585 AAGATTAATCAAAAA GAACTTGAGT TTA ACTCAGGTTC TTTTTTTACAAGAAT TERM 255 196565 - 196587 + F 100 -11.4 -5.40474 | opp_overlap 196565, overlap 196585 AAGATTAATCAAAAA GAACTTGAGT TTA ACTCAGGTTC TTTTTTTACAAGAAT SAK_0225 196671 - 197036 + | hypothetical protein TERM 256 197139 - 197172 + F 100 -12.7 -5.09259 | opp_overlap 197145 197147, overlap 197147 CTCTCAAGAAATCAT TGAAAAGATCTCACC AATT GGTGAGATTTTTTTA TTTTATTTTCGAATA TERM 257 197166 - 197145 - f 76 -7.3 -4.26681 | opp_overlap 197139 197147, overlap 197147 AGAAATCATTGAAAA GATCTCACC AATT GGTGAGATT TTTTTATTTTATTTT TERM 258 197164 - 197147 - f 86 -9.9 -3.72347 | opp_overlap 197139 197147, overlap 197145 AAATCATTGAAAAGA TCTCACC AATT GGTGAGA TTTTTTTATTTTATT TERM 259 197147 - 197164 + F 100 -9.9 -6.17669 | opp_overlap 197147 197145, overlap 197139 AAATCATTGAAAAGA TCTCACC AATT GGTGAGA TTTTTTTATTTTATT TERM 260 198071 - 198055 - g 74 -3.7 -5.09426 | GGTAATTTTAAAAAA CACTCAT CAG ACAAGTG GAATAGACAAGTGGA comGA 197209 - 198180 + | competence protein ComGA TERM 261 198647 - 198637 - g 73 -6.8 -4.22652 | TTATATTATTCAAAA GCGA TTG TCGC GCATTAAAGTAGCTT SAK_0227 198215 - 199117 + | ComG operon protein 2, putative SAK_0228 199114 - 199443 + | competence protein, putative TERM 262 199540 - 199559 + GF 70 -8 -3.01001 | overlap 199544 TATTTTTAGGCAGGT TGAAGAAA CAAT TTTCTTCA TATCCTTTGAACATC TERM 263 199631 - 199667 + GF 70 -5.3 -4.46112 | opp_overlap 199632, overlap 199632 AAACAAACCCTTACA ATCTCTCATAATTATCT CGA AAATACTTATGAGAGAC TTTATTTACCTAAAA TERM 264 199632 - 199666 + GF 74 -8.8 -3.27185 | opp_overlap 199632, overlap 199631 AACAAACCCTTACAA TCTCTCATAATTATCT CGA AAATACTTATGAGAGA CTTTATTTACCTAAA TERM 265 199666 - 199632 - gf 85 -11 -3.36175 | opp_overlap 199632 199631 AACAAACCCTTACAA TCTCTCATAATTATCT CGA AAATACTTATGAGAGA CTTTATTTACCTAAA SAK_0229 199493 - 199831 + | competence protein, putative SAK_0230 199803 - 200102 + | hypothetical protein SAK_0231 200125 - 200517 + | hypothetical protein SAK_0232 200495 - 200866 + | hypothetical protein TERM 266 201164 - 201146 - g 74 -4.6 -4.99435 | opp_overlap 201150, overlap 201150 GTGAATAACCAAAAA TTACGTCA ACT TGACTTAA GTCAAGAAGAATGGC SAK_0233 200981 - 201955 + | hypothetical protein ackA 201987 - 203180 + | acetate kinase TERM 267 203246 - 203193 - f 95 -9.3 -5.18357 | gap 1, opp_overlap 203200 203203 203210, overlap 203182 203181 203200 203203 203210 TAAGTTATCAAAAAA TTGATAAGACCAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG-TCTTTTGAA CAGATATGTAAAATG TERM 268 203200 - 203239 + F 100 -14 -4.09243 | gap 1, opp_overlap 203193 203200 203203 203210, overlap 203203 203210 TCAAAAAATTGATAA GACCAGAAAAGTTGATAGT TTA ACTATCAACTTTTTT-GTC TTTTGAACAGATATG TERM 269 203239 - 203200 - f 95 -11.8 -3.5944 | gap 1, opp_overlap 203200 203203 203210, overlap 203193 203203 203210 TCAAAAAATTGATAA GACCAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG-TC TTTTGAACAGATATG TERM 270 203237 - 203203 - f 100 -14.6 -2.5967 | opp_overlap 203200 203203 203210, overlap 203200 203193 203210 AAAAATTGATAAGAC CAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG TCTTTTGAACAGATA TERM 271 203203 - 203237 + F 100 -16.8 -3.6422 | opp_overlap 203203 203200 203193 203210, overlap 203200 203210 AAAAATTGATAAGAC CAGAAAAGTTGATAGT TTA ACTATCAACTTTTTTG TCTTTTGAACAGATA TERM 272 203230 - 203210 - f 100 -11.3 -4.56629 | opp_overlap 203203 203200 203210, overlap 203203 203200 203193 GATAAGACCAGAAAA GTTGATAGT TTA ACTATCAAC TTTTTTGTCTTTTGA TERM 273 203210 - 203230 + F 100 -11.3 -5.63645 | opp_overlap 203210 203203 203200 203193, overlap 203203 203200 GATAAGACCAGAAAA GTTGATAGT TTA ACTATCAAC TTTTTTGTCTTTTGA TERM 274 203316 - 203276 - f 95 -9.3 -5.26316 | GTACTTGACAAAAAA TGTATAGTTAACTATAC TATGAAT GTAAAGCTAACTATACA AAAAAGGTGTAAGAT SAK_0235 203332 - 203538 + | DNA-binding protein SAK_0236 203597 - 203734 + | hypothetical protein SAK_0237 203775 - 204230 + | hypothetical protein TERM 275 204336 - 204346 + G 78 -5.4 -5.00339 | opp_overlap 204329 204327 GCAAAATTTTAGCTT TGCT AAT AGCA TTTTTAGTTATTAAT TERM 276 204672 - 204713 + G 78 -9.7 -3.46302 | opp_overlap 204707, overlap 204675 CACTAGCTTTGATGT TAATTTTTGCCATAATTGG TGCC CCTATTATGGAAGAAATTA TATTTCGCTATATTA TERM 277 204675 - 204710 + G 71 -7 -3.85256 | opp_overlap 204707, overlap 204672 TAGCTTTGATGTTAA TTTTTGCCATAATTGG TGCC CCTATTATGGAAGAAA TTATATTTCGCTATA SAK_0238 204299 - 204964 + | CAAX amino terminal protease family protein TERM 278 205006 - 204954 - T 100 -13.1 -2.87957 | opp_overlap 204970, overlap 204970 TAATCAGTACAATGA TGAATAACTAAAAAAACTTTGAGCA ATT TGCTCAAAGTTTTTTTGCTTTCTCA ATAGTAGCATCAATG TERM 279 204990 - 204970 - T 100 -12.7 -5.71638 | opp_overlap 204970, overlap 204954 GAATAACTAAAAAAA CTTTGAGCA ATT TGCTCAAAG TTTTTTTGCTTTCTC TERM 280 204970 - 204990 + T 100 -12.7 -5.75822 | opp_overlap 204954 204970 GAATAACTAAAAAAA CTTTGAGCA ATT TGCTCAAAG TTTTTTTGCTTTCTC proC 205755 - 204985 - | pyrroline-5-carboxylate reductase pepA 206892 - 205825 - | glutamyl aminopeptidase SAK_0241 207316 - 207077 - | hypothetical protein SAK_0242 207477 - 207761 + | hypothetical protein SAK_0243 207758 - 208081 + | thioredoxin family protein SAK_0244 208114 - 208740 + | tRNA-binding domain-containing protein TERM 281 208747 - 208770 + T 100 -12.6 -4.93365 | opp_overlap 208747 AAAAATTAGTAAAAA TCAACTTAGC TTCA GCTAAGTTGA TTTTTAGTTGTAAAC TERM 282 208770 - 208747 - T 100 -12.6 -4.88129 | opp_overlap 208747 AAAAATTAGTAAAAA TCAACTTAGC TTCA GCTAAGTTGA TTTTTAGTTGTAAAC SAK_0245 209510 - 208794 - | hypothetical protein TERM 283 209668 - 209649 - g 71 -5 -4.64766 | CTGAGATGGTAAAAA CACCAACT GACA AGTCAGTG ACGCGTGCAACTGTT ssb2 209591 - 209986 + | single-strand DNA-binding protein TERM 284 210024 - 210047 + F 100 -10.4 -5.7946 | opp_overlap 210023 210022 ATTTCTAAATATACT GGTTGCTTTT CACA GAAAGCAACC TTTTTTTATTGAAAA SAK_0247 210110 - 210754 + | HAD-superfamily hydrolase, subfamily IA, variant 3 family protein TERM 285 210806 - 210831 + G 70 -2.7 -5.14163 | gap 1 TGTTGTTATTCCAAA GGCTAGGAATTA TTA TGATTT-TAGCC TTTTTATTGGTAAAT SAK_0248 210781 - 212526 + | sensor histidine kinase SAK_0249 212507 - 213247 + | DNA-binding response regulator TERM 286 213280 - 213305 + F 93 -6.3 -5.53991 | gap 1 TCCCTTTGTTGTTTA GAAGCTTGAATT TGC AATTCG-GCTTC TTTTTTTGGTAACTG SAK_0250 213417 - 213872 + | hypothetical protein SAK_0251 213874 - 214602 + | hypothetical protein TERM 287 214619 - 214636 + F 70 -4.1 -4.96762 | opp_overlap 214621, overlap 214621 TAATAGCGTGGTTAA GACTGAA TTTA TTCAGCC TTTTTATGATGTCTA SAK_0252 214845 - 216473 + | peptide/opine/nickel uptake ABC transporter substrate-binding protein TERM 288 216506 - 216558 + F 100 -12.2 -5.055 | gap 1, opp_overlap 216527, overlap 216555 GGCTACTTTAAGTTT GGAGTCAGAGAAAACAATGTACACC TTAT GGTGTGAATGGTTTCCTC-GACTCC TTTTTTAACAATTAA TERM 289 217381 - 217393 + G 82 -7.7 -4.50976 | TTTGGAGGATCCGTT CTTGC TGA GCAAG TTTTCTCATATCCAG SAK_0253 216586 - 217563 + | peptide/opine/nickel uptake ABC transporter permease SAK_0254 217560 - 218381 + | peptide/opine/nickel uptake ABC transporter permease SAK_0255 218393 - 219196 + | peptide/opine/nickel uptake ABC transporter ATP-binding protein SAK_0256 219180 - 219806 + | peptide/opine/nickel uptake ABC transporter ATP-binding protein TERM 290 219837 - 219813 - f 71 -8.7 -2.82658 | opp_overlap 219813, overlap 219812 219815 GGAGATTAAAAAACT CACCTACTA TATCAAT TAGTAGGTG TTTTTTATTAAGAGA TERM 291 219813 - 219837 + F 100 -8.7 -5.4505 | opp_overlap 219812 219813 219815 GGAGATTAAAAAACT CACCTACTA TATCAAT TAGTAGGTG TTTTTTATTAAGAGA SAK_0257 220089 - 222119 + | PTS system, trehalose-specific IIBCA component TERM 292 223562 - 223545 - g 75 -9.9 -2.79327 | overlap 223544 TTATTCGAGCGAAAT CTCGAGA CAAT TCTCGAG TACCAATGCAATGGG SAK_0258 222341 - 223966 + | alpha amylase family protein TERM 293 223963 - 224018 + F 85 -10.9 -3.28924 | opp_overlap 223967 223978, overlap 223966 223978 AGCTATCTTAGTGTC ATAACATTTTAAAAACCTTTACTTA TTCAAT TAAGTAAAGGTTTTTAAAGTGCTGC TTGTGGAAAGGAATC TERM 294 223966 - 224015 + F 100 -14.8 -2.82623 | opp_overlap 223967 223978, overlap 223963 223978 TATCTTAGTGTCATA ACATTTTAAAAACCTTTACTTA TTCAAT TAAGTAAAGGTTTTTAAAGTGC TGCTTGTGGAAAGGA TERM 295 224014 - 223967 - f 100 -16.1 -3.31263 | opp_overlap 223966 223963 223978, overlap 223978 ATCTTAGTGTCATAA CATTTTAAAAACCTTTACTTA TTCAAT TAAGTAAAGGTTTTTAAAGTG CTGCTTGTGGAAAGG TERM 296 223978 - 224003 + F 90 -9.2 -4.63527 | opp_overlap 223967 223978, overlap 223966 223963 ATAACATTTTAAAAA CCTTTACTTA TTCAAT TAAGTAAAGG TTTTTAAAGTGCTGC TERM 297 224003 - 223978 - f 90 -9.2 -4.67556 | opp_overlap 223978 223966 223963, overlap 223967 ATAACATTTTAAAAA CCTTTACTTA TTCAAT TAAGTAAAGG TTTTTAAAGTGCTGC SAK_0259 224182 - 226218 + | PRD domain/PTS system IIA domain-containing protein SAK_0260 226221 - 226505 + | PTS system lactose/cellobiose family IIB subunit TERM 298 227724 - 227734 + G 73 -5.4 -4.54727 | overlap 227732 AAAGGGTCAACATTC TCAG ATG CTGA TTTTGGTTTGACCGG ulaA 226518 - 227873 + | ascorbate-specific PTS system enzyme IIC SAK_0262 227876 - 228733 + | transketolase, N-terminal subunit, putative SAK_0263 228730 - 229659 + | transketolase, C-terminal subunit, putative TERM 299 229695 - 229654 - f 91 -10.4 -4.005 | opp_overlap 229657 229666, overlap 229657 229660 229666 AAATCAATTTATAAA TCATAACAAAAAGGCAAC ATTGGA GTTGCCTTTTTGTTATTT TCTGAAATTTTTAAG TERM 300 229692 - 229657 - f 100 -16.5 -3.04203 | opp_overlap 229657 229666, overlap 229654 229660 229666 TCAATTTATAAATCA TAACAAAAAGGCAAC ATTGGA GTTGCCTTTTTGTTA TTTTCTGAAATTTTT TERM 301 229657 - 229692 + F 100 -16.5 -4.47485 | opp_overlap 229654 229657 229660 229666, overlap 229666 TCAATTTATAAATCA TAACAAAAAGGCAAC ATTGGA GTTGCCTTTTTGTTA TTTTCTGAAATTTTT TERM 302 229689 - 229660 - f 100 -13.8 -3.65317 | opp_overlap 229657 229666, overlap 229657 229654 229666 ATTTATAAATCATAA CAAAAAGGCAAC ATTGGA GTTGCCTTTTTG TTATTTTCTGAAATT TERM 303 229683 - 229666 - f 88 -7 -5.25772 | opp_overlap 229657 229666, overlap 229660 229657 229654 AAATCATAACAAAAA GGCAAC ATTGGA GTTGCC TTTTTGTTATTTTCT TERM 304 229666 - 229683 + F 93 -7 -5.47964 | opp_overlap 229666 229660 229657 229654, overlap 229657 AAATCATAACAAAAA GGCAAC ATTGGA GTTGCC TTTTTGTTATTTTCT TERM 305 229939 - 229921 - g 77 -10.4 -2.84999 | opp_overlap 229920 229908 229930 229933, overlap 229932 ACCAAATTTAGGATA CTTGAAAG TTA CTTTCAAG GTATTGAAAATATGT SAK_0264 229768 - 231027 + | oxidoreductase, NAD-binding TERM 306 231278 - 231261 - g 70 -5.5 -4.38219 | ACAACACAAAAAAGA CCACGCT ACTT ACCGTGG ATTGATGAAAAAAAT rpsO 231115 - 231384 + | 30S ribosomal protein S15 TERM 307 231427 - 231408 - f 100 -9.4 -4.89009 | opp_overlap 231408 AGAGTCAAGTAAAAA CACTAGAA AATT TTCTAGTG TTTTTTGTTTTAAAC TERM 308 231408 - 231427 + F 100 -9.4 -5.79595 | opp_overlap 231408 AGAGTCAAGTAAAAA CACTAGAA AATT TTCTAGTG TTTTTTGTTTTAAAC TERM 309 231562 - 231589 + F 80 -6.4 -4.81851 | opp_overlap 231562 231561 AATCATTGTAACAAG GTCTGATTGCTA GTAT TAATAATCAGAC TTTTTACGTTTACAT pnp 231765 - 233894 + | polynucleotide phosphorylase/polyadenylase TERM 310 234470 - 234460 - g 73 -5.4 -4.59853 | overlap 234468 TTAAGTTTTGAAAAA TGGT ATA ACCA TAATGATTTTGGTGG SAK_0267 233896 - 234648 + | hypothetical protein cysE 234657 - 235241 + | serine O-acetyltransferase SAK_0269 235251 - 235433 + | putative lipoprotein cysS 235430 - 236773 + | cysteinyl-tRNA synthetase SAK_0271 236766 - 237152 + | hypothetical protein TERM 311 237183 - 237154 - f 90 -8 -4.89063 | opp_overlap 237160, overlap 237160 CCATTGAAAAATAAA CAAAAAGAGAGG CTATAT CCTCTCTTTTTT ATAGAGACATTAGGA TERM 312 237160 - 237177 + F 88 -7 -5.24129 | opp_overlap 237160 237154 AAAAATAAACAAAAA GAGAGG CTATAT CCTCTC TTTTTTATAGAGACA TERM 313 237177 - 237160 - f 100 -7 -5.63012 | opp_overlap 237160, overlap 237154 AAAAATAAACAAAAA GAGAGG CTATAT CCTCTC TTTTTTATAGAGACA SAK_0272 237255 - 238010 + | RNA methyltransferase SAK_0273 238007 - 238525 + | hypothetical protein SAK_0274 238618 - 239478 + | DegV family protein TERM 314 239519 - 239536 + F 74 -5.7 -4.58424 | opp_overlap 239521 TATGTTCTTTTAGTA TACATTT TATA AAATGTA TTTTATATGATGCTA SAK_0275 239823 - 239942 + | hypothetical protein rplM 240359 - 240805 + | 50S ribosomal protein L13 TERM 315 240942 - 240925 - g 84 -4.2 -5.57396 | ACAATCAATAAAAAA GATGTA GAAGAG TACATC CCACACGCAGACCTT rpsI 240826 - 241218 + | 30S ribosomal protein S9 TERM 316 241271 - 241245 - T 73 -8 -3.47941 | opp_overlap 241245 CATCAACGATTACAA GCATTTTGCAAG TCT CTTGCAAGGTGC TTTTTTTGTCGTTTT TERM 317 241245 - 241271 + T 100 -12.4 -5.77632 | opp_overlap 241245 CATCAACGATTACAA GCATTTTGCAAG TCT CTTGCAAGGTGC TTTTTTTGTCGTTTT SAK_0278 242500 - 241346 - | phage integrase family site specific recombinase TERM 318 241658 - 241641 - G 74 -2.7 -5.34655 | TAAGTAAAAATAAAA TCTTGCT CGAT AGAAAGA GGTGCGACTGCTAGT TERM 319 241659 - 241679 + g 89 -6.1 -5.26119 | TGCTCGATAGAAAGA GGTGCGACT GCT AGTTGTGCC TTTTCTTTTTGGCAA TERM 320 242260 - 242215 - G 73 -8.6 -3.41222 | opp_overlap 242213 242224, overlap 242213 TGTGAAGCCTAAACA TATCAAGAGTACGAGA-AGCCG TGGT CGGCTCTACCGTA-TCTTGATA GGCTTGATACCATTT TERM 321 242459 - 242470 + g 89 -5.8 -5.28481 | opp_overlap 242457 242459 GACTAAATACAAATA GCCA TTTT TGGC TTTTTTGCTTGGGTA SAK_0279 243120 - 242569 - | DNA-binding protein TERM 322 242982 - 242992 + g 90 -4 -5.81032 | opp_overlap 242982 AATATTTTGCAAGAA TAAC TGC GTTA TTTTTTTTAGGATTG SAK_0280 243285 - 243578 + | hypothetical protein TERM 323 243660 - 243639 - f 74 -8.9 -3.16881 | opp_overlap 243624 TATTTACCCTAGGAA GATATTTCA ATCC TGAAATATC AGATTACAATAAGCG SAK_0281 243719 - 244000 + | hypothetical protein SAK_0282 244006 - 244332 + | replication initiation factor TERM 324 244860 - 244840 - g 100 -8.4 -5.42514 | GGAGAAATCAAAAAA GCTAAAGA CCGTT TCTTTAGC TACAAGAAAAATAAC SAK_0283 244336 - 244977 + | hypothetical protein TERM 325 245092 - 245108 + F 82 -9.5 -3.73072 | TAACAGCCCGCTATG TGCACAT TTG ATGTGCA TTTACTACACCCGTT TERM 326 245257 - 245237 - f 100 -7.6 -5.47821 | gap 1 ACGCAGTCAAAAAAA TTGG-CGCC GATA GGCGACCAA GAAAAGAAAGGAGTC TERM 327 245491 - 245469 - g 83 -6.2 -5.20781 | TATGACAAAATAAAA GGACAAGCCT TTA ATGCTCGCCC TTTCCGTTTGGAGTT TERM 328 245666 - 245649 - g 78 -4 -5.36441 | GTGCTAGAGAAAAAA GGGCGC CCCACT GCGACC AAAGAATTTCGTTCA TERM 329 246020 - 246008 - g 74 -2.7 -5.30339 | AGCAAAATACAAAAA GATTT TAG AAACC TATCAAACATCAGAT SAK_0284 245277 - 246152 + | replication initiation factor family protein SAK_0285 246188 - 246622 + | hypothetical protein TERM 330 246609 - 246628 + F 85 -10.8 -3.29511 | overlap 246597 TAGTGGCAATATGGC TTGCCATC TTTT GATGGCAA TTGTCGGACAATGCG TERM 331 246676 - 246658 - f 83 -10.3 -3.14881 | opp_overlap 246655 GAAGCGTCCGACCAA GGGCACT GCTTA AGTGCCC TACTCGCTTCGGCGA pre 246939 - 248195 + | plasmid recombination enzyme TERM 332 248293 - 248278 - f 73 -9 -2.96031 | opp_overlap 248292, overlap 248277 GTCAGGCTAAAGAAC TGGCGA CCGA TCGCCA TAGACTAAAACAGTC SAK_0287 248363 - 248833 + | hypothetical protein TERM 333 249098 - 249137 + T 74 -9.5 -2.61888 | gap 1, opp_overlap 249107, overlap 249107 TAGTTAATTTGTAAT C-TTCAAAAAGCCTTGGC ATTAC GCTAAGGCTTTTTGATTG CTATTTAAACAATTT TERM 334 249127 - 249107 - T 82 -7.5 -4.62471 | opp_overlap 249107 249098 TGTAATCTTCAAAAA GCCTTGGCA TTA CGCTAAGGC TTTTTGATTGCTATT TERM 335 249107 - 249127 + T 93 -9 -4.92777 | opp_overlap 249107, overlap 249098 TGTAATCTTCAAAAA GCCTTGGC ATTAC GCTAAGGC TTTTTGATTGCTATT SAK_0288 249473 - 249138 - | hypothetical protein SAK_0289 249750 - 249463 - | hypothetical protein TERM 336 249832 - 249817 - H 86 -4 -5.83226 | AAGTCAATAAAAAAA TCCCAA TTGA TTGAGA TAGCTTTCGTTTATT TERM 337 250074 - 250096 + H 100 -11.4 -5.03747 | opp_overlap 250073 250074 250076 ATCAACGTTTCAAAG CACTTTGCAA ATC TTGCAAGGTG TTTTTTAAAACCTTT TERM 338 250096 - 250074 - H 72 -9.2 -2.74501 | opp_overlap 250074, overlap 250073 250076 ATCAACGTTTCAAAG CACTTTGCAA ATC TTGCAAGGTG TTTTTTAAAACCTTT SAK_0290 250257 - 250547 + | hypothetical protein TERM 339 250571 - 250604 + F 78 -9.7 -3.18945 | opp_overlap 250562 250570, overlap 250575 TTCAAATTCATAAGT TTAACTTAGGAAGGC ATAA GCTCTCCTAAGTTGA TATATTATAGCTAGA TERM 340 250575 - 250600 + F 73 -8.3 -3.40191 | opp_overlap 250562 250570, overlap 250571 AATTCATAAGTTTAA CTTAGGAAGGC ATAA GCTCTCCTAAG TTGATATATTATAGC SAK_0291 250649 - 251056 + | hypothetical protein TERM 341 251234 - 251221 - gf 85 -2.5 -5.80248 | GAAGATAGAAAAAAA TTTAA GGTA TTAAA AACTTCTCCTGACGA SAK_0292 251056 - 251616 + | hypothetical protein SAK_0293 251589 - 252269 + | hypothetical protein SAK_0294 252254 - 252640 + | hypothetical protein SAK_0295 252674 - 252955 + | hypothetical protein SAK_0296 253046 - 253144 + | hypothetical protein TERM 342 253381 - 253406 + F 100 -10.5 -5.40625 | opp_overlap 253383 ATCAGCGATTGGAAG CACTTCATGGT TCAC ACCATGGGGTG TTTTTTGTGTAATAT SAK_0297 253572 - 253676 + | hypothetical protein SAK_0298 253798 - 254658 + | Rgg/GadR/MutR family transcriptional regulator TERM 343 254654 - 254686 + F 87 -8.8 -4.2331 | gap 1, opp_overlap 254653 254656 254663, overlap 254655 254656 254663 ATAGGGTAACAAGAT TAT-AAAAAATCCCA TTTA TGGGATTTTTTAATA TTTCTCCTTTTGGTT TERM 344 254655 - 254684 + F 82 -9.5 -3.69497 | opp_overlap 254653 254656 254663, overlap 254654 254656 254663 TAGGGTAACAAGATT ATAAAAAATCCCA TTTA TGGGATTTTTTAA TATTTCTCCTTTTGG TERM 345 254656 - 254683 + F 100 -13 -2.80614 | opp_overlap 254656 254653 254663, overlap 254655 254654 254663 AGGGTAACAAGATTA TAAAAAATCCCA TTTA TGGGATTTTTTA ATATTTCTCCTTTTG TERM 346 254683 - 254656 - f 100 -13 -2.85813 | opp_overlap 254655 254654 254656 254663, overlap 254653 254663 AGGGTAACAAGATTA TAAAAAATCCCA TTTA TGGGATTTTTTA ATATTTCTCCTTTTG TERM 347 254676 - 254663 - f 93 -6.7 -5.36965 | opp_overlap 254656 254655 254654 254663, overlap 254656 254653 CAAGATTATAAAAAA TCCCA TTTA TGGGA TTTTTTAATATTTCT TERM 348 254663 - 254676 + F 93 -6.7 -5.34055 | opp_overlap 254663 254656 254653, overlap 254656 254655 254654 CAAGATTATAAAAAA TCCCA TTTA TGGGA TTTTTTAATATTTCT SAK_0299 254731 - 255912 + | major facilitator family transporter TERM 349 255946 - 255963 + T 74 -5.6 -4.83593 | opp_overlap 255946 GAAACATCAAAAAAA CTTGTC TCTACT GACAAG TTTTTAATAGTTATT TERM 350 255963 - 255946 - T 87 -5.6 -5.66989 | opp_overlap 255946 GAAACATCAAAAAAA CTTGTC TCTACT GACAAG TTTTTAATAGTTATT SAK_0300 256624 - 255974 - | quaternary amine ABC transporter permease SAK_0301 257551 - 256625 - | quaternary amine ABC transporter amino acid-binding protein TERM 351 256741 - 256765 + g 84 -3.5 -5.72207 | overlap 256744 256745 TCGTTTTTAAATTGA TTTTACCATCG AGT CGATGGAGTAA TTTTTTTAGTTTAGG SAK_0302 258189 - 257554 - | quaternary amine ABC transporter permease SAK_0303 259334 - 258189 - | quaternary amine ABC transporter ATP-binding protein TERM 352 258331 - 258293 - G 87 -11.4 -3.63515 | gap 1, opp_overlap 258291 258293 TCTCATGGTCAACAA CTGGAGCGTATTTTAAA CCAAGT TTTAAAATACGCTC-AG CAGTATTTCTAAGTA TERM 353 259074 - 259090 + g 70 -8.1 -3.43618 | opp_overlap 259066 259071 CATTAAACCAATGTT TTGGATA ACA TATCCAA TTCTGCGTCTTAATT TERM 354 259734 - 259718 - H 83 -6.6 -4.86216 | ACAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 355 259748 - 259738 - H 79 -6.8 -4.61868 | overlap 259740 259745 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 356 260769 - 260782 + H 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 357 261871 - 261852 - H 95 -12.2 -3.62096 | opp_overlap 261851 261850 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 358 264866 - 264851 - H 95 -9 -5.10877 | opp_overlap 264862 ATAAGAAAGTAAAAA CCAAGC AATA GCTTGG GCGCGTAGCTCAGGT TERM 359 265742 - 265721 - H 100 -11.7 -3.95073 | opp_overlap 265726 265736, overlap 265736 CGGTATACTTATAAA GACAAGGTT TCTA AACCTTGTC TCAGATTGAAGACAA TERM 360 265759 - 265786 + H 86 -7.1 -4.87328 | opp_overlap 265759 CAGATTGAAGACAAA GTCCTTAGACA TTCACT TTTCTAAGGAC TTTTCTGTTTGTCTA TERM 361 265786 - 265759 - H 76 -7.1 -4.22678 | opp_overlap 265759 CAGATTGAAGACAAA GTCCTTAGACA TTCACT TTTCTAAGGAC TTTTCTGTTTGTCTA TERM 362 267272 - 267244 - g 100 -8.9 -5.17488 | opp_overlap 267244 267250 267267 AATAGTAAAAGAAAA GACAAGCTGGATT AAC ATTCCAGTTTGTC TTCAATCTGAGACAA TERM 363 267244 - 267272 + G 80 -11.1 -3.12351 | opp_overlap 267244, overlap 267250 267267 AATAGTAAAAGAAAA GACAAGCTGGATT AAC ATTCCAGTTTGTC TTCAATCTGAGACAA TERM 364 267283 - 267304 + G 100 -11.7 -5.31877 | opp_overlap 267288, overlap 267267 TTGTCTTCAATCTGA GACAAGGTT TCTA AACCTTGTC TTTTTTCTACTAGAT SAK_0320 265841 - 267331 + | ISSag8, transposase TERM 365 267975 - 267959 - g 71 -4.5 -4.85599 | TTTAGCTCATAAAAA TGATATC CCA AATATCA AATCAATGGGAATGC SAK_0321 267582 - 268040 + | putative lipoprotein TERM 366 268845 - 268831 - g 81 -4.2 -5.40072 | TTTCTGCTAAAAAAA TCCAAG AAG CTGGGA AGCATGTTACCTACT SAK_0322 268104 - 269738 + | hypothetical protein SAK_0323 269757 - 270029 + | hypothetical protein SAK_0324 270039 - 270389 + | hypothetical protein TERM 367 270581 - 270568 - f 79 -6.7 -4.59773 | TGTTATCTTTAAAAA GTGCT CAGT AGCAC TCAAAATCCATTGTC TERM 368 270643 - 270664 + F 100 -11.7 -5.25799 | opp_overlap 270643 CTGTATACTTATAAA GACAAGGTT TAGA AACCTTGTC TTTTTCTATTATTTT TERM 369 270664 - 270643 - f 100 -11.7 -3.95073 | opp_overlap 270643 CTGTATACTTATAAA GACAAGGTT TAGA AACCTTGTC TTTTTCTATTATTTT TERM 370 271145 - 271162 + F 100 -8.5 -5.49569 | opp_overlap 271145 GATATAAAGACATAA GCTTGAA AATT TTCAAGC TTTTTTATCTTGCTA TERM 371 271162 - 271145 - f 79 -8.5 -3.81885 | opp_overlap 271145 GATATAAAGACATAA GCTTGAA AATT TTCAAGC TTTTTTATCTTGCTA SAK_0325 271250 - 271831 + | hypothetical protein SAK_0326 271834 - 272052 + | DNA-binding protein TERM 372 272369 - 272356 - f 79 -6.7 -4.62069 | TGTTTACTTTAAAAA GTGCT TGGT AGCAC TCAAAATCCAGTGTC SAK_0327 272625 - 273185 + | acetyltransferase TERM 373 273768 - 273756 - g 73 -3.4 -5.17353 | overlap 273759 ATAGGTATGAAAAAA GAAG GCGAG CTTC GTCATCTTGCAAAAA SAK_0328 273285 - 273863 + | acetyltransferase SAK_0329 273906 - 274586 + | acetyltransferase TERM 374 274756 - 274775 + T 90 -5 -5.72616 | opp_overlap 274756 274758, overlap 274744 274758 GCATCAAAGAAAAAA GTCAAGAT TATT ATCTTGTC TTTTTTTCTATGAGT TERM 375 274775 - 274756 - T 85 -5 -5.68438 | opp_overlap 274756 274744 274758, overlap 274758 GCATCAAAGAAAAAA GTCAAGAT TATT ATCTTGTC TTTTTTTCTATGAGT TERM 376 274758 - 274773 + T 74 -6.2 -4.50122 | opp_overlap 274756 274758, overlap 274756 274744 ATCAAAGAAAAAAGT CAAGAT TATT ATCTTG TCTTTTTTTCTATGA SAK_0330 275793 - 274846 - | hypothetical protein SAK_0331 276281 - 275790 - | ECF subfamily RNA polymerase sigma factor SAK_0332 277469 - 276861 - | TetR family transcriptional regulator TERM 377 277124 - 277137 + g 81 -3.9 -5.47821 | CTTGCATCAATATTT TAATG AGAT CATTA TTTTTTTCAATAAAT SAK_0333 278590 - 277493 - | ABC transporter, permease protein SAK_0334 279309 - 278593 - | ABC transporter, ATP-binding protein TERM 378 279334 - 279355 + r 77 -8.1 -3.88062 | overlap 279325 279324 279337 TTGCTCCTCTCTCAG TGAGTGAGT GTTT ACTCACTTA TTTGATATCATATAT TERM 379 279337 - 279352 + r 77 -7.6 -4.05877 | overlap 279325 279324 279334 CTCCTCTCTCAGTGA GTGAGT GTTT ACTCAC TTATTTGATATCATA TERM 380 279519 - 279549 + r 100 -8.4 -5.42131 | opp_overlap 279519 279524, overlap 279524 AAAATGGGCACAGAA TAAAACGACTAAGA ATA TCCTTGTCGTTTTA TTTTTTATATAGTTA TERM 381 279549 - 279519 - R 85 -10.6 -3.51563 | opp_overlap 279519 279524, overlap 279524 AAAATGGGCACAGAA TAAAACGACTAAGA ATA TCCTTGTCGTTTTA TTTTTTATATAGTTA TERM 382 279544 - 279524 - R 80 -6.1 -4.84311 | opp_overlap 279519 279524, overlap 279519 GGGCACAGAATAAAA CGACTAAGA ATA TCCTTGTCG TTTTATTTTTTATAT TERM 383 279524 - 279544 + r 77 -3.9 -5.51612 | opp_overlap 279524 279519, overlap 279519 GGGCACAGAATAAAA CGACTAAGA ATA TCCTTGTCG TTTTATTTTTTATAT SAK_0335 280256 - 279573 - | hypothetical protein TERM 384 279747 - 279773 + g 77 -8.2 -3.90328 | opp_overlap 279726 279747 279743 279741, overlap 279768 279769 AATTAGAAATATATA TCGAAAGAAA TATTTCT TTTCTTTCGA TTTATCGAAGTTATA SAK_0336 280588 - 280277 - | PadR family transcriptional regulator TERM 385 281183 - 281173 - g 70 -6.8 -4.14013 | GAAAATGTGTTAAAA GCTG AAG CAGC AGTCAATAAGTTAAC SAK_0337 280780 - 281487 + | hypothetical protein TERM 386 281514 - 281498 - f 82 -9.5 -3.67068 | opp_overlap 281498 AGTAAAATCCTGAAA GTCTAGT TTT ACTAGAC TTTTTTGCTATGCTT TERM 387 281498 - 281514 + F 100 -9.5 -5.2422 | opp_overlap 281498 AGTAAAATCCTGAAA GTCTAGT TTT ACTAGAC TTTTTTGCTATGCTT nagA 281765 - 282913 + | N-acetylglucosamine-6-phosphate deacetylase TERM 388 282916 - 282935 + F 100 -9.4 -5.09521 | opp_overlap 282916 282919 TTGGCAATCTTGAAA GAACTAGT TTTT ACTAGTTC TTTTTAATTTATTAA TERM 389 282935 - 282916 - f 82 -9.4 -3.60792 | opp_overlap 282916, overlap 282919 TTGGCAATCTTGAAA GAACTAGT TTTT ACTAGTTC TTTTTAATTTATTAA TERM 390 282965 - 282983 + F 77 -3.2 -5.58179 | opp_overlap 282965 ATTTTTAATGAAATA TAGTTTGA CAA TAAAACTA TTTTTTCTTATAATG TERM 391 283246 - 283266 + G 77 -2.5 -5.51046 | overlap 283249 TTAATTTTGTTAGCG TAATCGGGC TTA GCTTGATGA TTTTTTCTGTGTTTA SAK_0339 283032 - 283574 + | isoprenylcysteine carboxyl methyltransferase (ICMT) family protein TERM 392 283758 - 283808 + F 82 -6.1 -5.06735 | gap 1, overlap 283774 TAAATTAGGGTGGAA CCGCGTCTTTGACGCCCCTGTGCT GTTG GGCATAGGTG-GTGTAGGACGTGG TTTTTATCATTTGTC TERM 393 284355 - 284371 + G 70 -8.1 -3.32844 | CTTCAAACAGGTCCT GTAACTT CTG AAGTTAC TTATGGACTAGAGCG glyQ 283887 - 284801 + | glycyl-tRNA synthetase subunit alpha TERM 394 285136 - 285146 + G 70 -2.6 -5.07486 | opp_overlap 285136 TAGAGCAAAAACTTA TATT GAT AATA TTTTTATTGCAGGTG SAK_0341 284801 - 285442 + | acyl carrier protein phosphodiesterase, putative TERM 395 287159 - 287146 - g 70 -6.7 -4.08945 | AGCATTGGTGCAAAA GAGCA AGGA TGCTC AATATAAAGTTTCCG glyS 285446 - 287485 + | glycyl-tRNA synthetase subunit beta TERM 396 287515 - 287530 + G 75 -9 -3.53012 | opp_overlap 287515 287514 GATCCTAAAAAAATT GCTCGT ATTA ACGAGC TTTCAAAAAAGAAAA SAK_0343 287497 - 287754 + | hypothetical protein TERM 397 287733 - 287747 + F 70 -7.2 -3.75024 | ACTACATGGTCGTAG TTTGGA TGA TCCAAA TTCTTAATGGTGAGA TERM 398 287789 - 287818 + F 88 -6.5 -5.4505 | gap 1 TAAAGTCAACACTTG GGTGGGGCAAAAGA TAA TCTTT-GTCTCGCC TTTTTTATTAGGAAG SAK_0344 287843 - 288106 + | hypothetical protein TERM 399 288687 - 288667 - g 78 -11.2 -2.63596 | TTGGATTTTAGACCA CGTTCCTG GAGCA CAGGAACG TGCTGAAAAAGGAGA glpK 288221 - 289729 + | glycerol kinase TERM 400 290737 - 290723 - g 76 -6.4 -4.4572 | overlap 290724 AATATTGTAAACAAA CGCTTC CCA GAAGCA GAGCTTACTATTGAT TERM 401 291071 - 291057 - g 73 -5.7 -4.68593 | CTGATTATCGAAAAA TGGCA GAAGG TGCCA TGGAAACTATTATTA glpO 289742 - 291571 + | glycerol-3-phosphate oxidase glpF 291583 - 292281 + | glycerol uptake facilitator protein TERM 402 292295 - 292318 + F 100 -8.9 -5.4756 | AAGAGATTTTTGATG CTGAGACCG ACTTTA TGGTCTCAG TTTTTTGTTACCGTT SAK_0348 292369 - 293706 + | pyridine nucleotide-disulfide oxidoreductase TERM 403 294477 - 294487 + G 70 -5.4 -4.4715 | GAAGGAGAAGTTCTG GCAA CTT TTGC TTTTCTACATTCACA SAK_0349 293697 - 295127 + | hypothetical protein TERM 404 296759 - 296745 - g 84 -7.8 -4.56702 | CGGTAATGAAACAAA CGCTGC ATG GCAACG AGCTGTATCAGAGAC tkt 295252 - 297237 + | transketolase TERM 405 297247 - 297272 + F 80 -5.5 -5.26918 | gap 1, opp_overlap 297247 CTTTAAGATCATGAA GAAGTTG-GGAA AGA TACCTCAACTTC TTTTTTGTAAGATAT SAK_0351 297450 - 297755 + | hypothetical protein SAK_0352 297775 - 298509 + | ABC transporter, ATP-binding protein SAK_0353 298513 - 300117 + | hypothetical protein TERM 406 300294 - 300348 + T 100 -14.5 -4.49314 | opp_overlap 300296 300310, overlap 300293 300295 300298 TATTGCTATCTATTA TATCTCATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGCTAAC TTGTTTTTCGTAATA TERM 407 300295 - 300347 + T 100 -18 -3.28504 | opp_overlap 300296 300310, overlap 300294 300293 300298 ATTGCTATCTATTAT ATCTCATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGCTAA CTTGTTTTTCGTAAT TERM 408 300346 - 300296 - T 100 -21.5 -2.80816 | opp_overlap 300295 300294 300293 300298, overlap 300310 TTGCTATCTATTATA TCTCATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGCTA ACTTGTTTTTCGTAA TERM 409 300298 - 300344 + T 100 -24.1 -2.80514 | opp_overlap 300296 300310, overlap 300295 300294 300293 GCTATCTATTATATC TCATCAGACAAAGAGACTAGG GATAA CCTAGTCTCTTTGTCTGATGC TAACTTGTTTTTCGT TERM 410 300332 - 300310 - T 100 -12.1 -4.08974 | opp_overlap 300298 300295 300294 300293, overlap 300296 ATCTCATCAGACAAA GAGACTAGG GATAA CCTAGTCTC TTTGTCTGATGCTAA SAK_0354 301710 - 300325 - | PTS system, IIBC component TERM 411 300962 - 300948 - G 71 -5 -4.60073 | TAGAGAACGACAAAA TTCCCA TGC TGAGAA ATATTAACATAGGAA proB 301851 - 302654 + | gamma-glutamyl kinase TERM 412 302754 - 302744 - g 75 -5.4 -4.76041 | TACAGCTAGTAAAAA TGAG ATA CTCA GGGACTTAGCGAGAA proA 302664 - 303917 + | gamma-glutamyl phosphate reductase TERM 413 304521 - 304502 - g 71 -5 -4.66535 | AATTTTCAAAACAAA TTGCTCGA AAAA TTGAGCAA GTACGAGCTGAAAAA mraW 304000 - 304947 + | S-adenosyl-methyltransferase MraW SAK_0358 304962 - 305288 + | cell division protein FtsL, putative TERM 414 305408 - 305385 - f 73 -9 -2.87239 | opp_overlap 305384 305385 AATAGGGAAAGAGTA GGTCAAAATC TGAT GATTTTAACC ATTTTCCTATTTTTC pbpX 305397 - 307550 + | penicillin-binding protein 2X TERM 415 308261 - 308281 + G 74 -8.3 -3.78409 | TTGGTTCACTTGCAT TGGGTGCTA TGT TAGCAGCCA TTTCAATTGCCTTAC mraY 307552 - 308562 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 416 308572 - 308600 + F 74 -6 -4.70353 | CTTTAAACTTTATTA GGGGATGTGGTA TGGAC TGCCAGATTCCC TTTTGCTTTCTTGTA TERM 417 309291 - 309318 + G 80 -11.4 -2.53918 | opp_overlap 309285 309287 309291, overlap 309290 309289 309293 AAATCAAAACAGCAA CAGTTATCGCTG ATAC CATCGATAACTG GCTTTTGTCCACTAA TERM 418 309318 - 309291 - g 87 -11.4 -3.58476 | opp_overlap 309291 309290 309289 309293, overlap 309285 309287 AAATCAAAACAGCAA CAGTTATCGCTG ATAC CATCGATAACTG GCTTTTGTCCACTAA SAK_0361 308660 - 310003 + | DEAD-box ATP dependent DNA helicase TERM 419 310014 - 310037 + F 81 -3.9 -5.5353 | TTTAAAATTATTAAA GTCTGAAAT CAGCTC GTTTCAGGC TTTTTTATTGATATA SAK_0362 310141 - 310953 + | polar amino acid ABC transporter amino acid-binding protein TERM 420 311695 - 311709 + G 81 -8.6 -4.16251 | ACAAATTATGGGTGG TAGCGA TTA TCGCTA TTTTGAACGTTATAT SAK_0363 311048 - 311851 + | polar amino acid ABC transporter permease SAK_0364 311851 - 312594 + | polar amino acid ABC transporter ATP-binding protein TERM 421 312639 - 312615 - f 76 -8.7 -3.50219 | opp_overlap 312615 AATATTTTGATATAA TGAAGGTTAGA ATG TCTAATCTTCA TTTTTAATTATTCTT TERM 422 312615 - 312639 + F 100 -10.9 -5.03201 | opp_overlap 312615 AATATTTTGATATAA TGAAGGTTAGA ATG TCTAATCTTCA TTTTTAATTATTCTT SAK_0365 312716 - 312940 + | hypothetical protein TERM 423 313070 - 313054 - g 75 -10.1 -2.78384 | CCTGGTGGTATGACA GCAGCGC TTT ACGCTGC ACGTTCAAACCTTAA trxB 313009 - 313923 + | thioredoxin-disulfide reductase TERM 424 313940 - 313969 + F 74 -3 -5.50723 | gap 1, opp_overlap 313944, overlap 313944 AAATACTAAAAGTAG AAAAGACT-ATCG AAAAA CGATTAGTCTTTC TTTTTATTTTCATGA TERM 425 313944 - 313965 + F 74 -3.8 -5.18409 | gap 1, opp_overlap 313944, overlap 313940 ACTAAAAGTAGAAAA GACT-ATCG AAAAA CGATTAGTC TTTCTTTTTATTTTC SAK_0367 314081 - 315541 + | nicotinate phosphoribosyltransferase nadE 315538 - 316359 + | NAD synthetase TERM 426 316366 - 316385 + F 100 -9.4 -5.42975 | opp_overlap 316366 TGGAAATAAGAAAAA TAGCTAGA ATAT TCTAGCTA TTTTTGTTTCTCTAA TERM 427 316385 - 316366 - f 100 -9.4 -5.38549 | opp_overlap 316366 TGGAAATAAGAAAAA TAGCTAGA ATAT TCTAGCTA TTTTTGTTTCTCTAA pepC 316472 - 317806 + | aminopeptidase C TERM 428 317858 - 317819 - T 100 -13.4 -2.85437 | gap 1, opp_overlap 317831 317857, overlap 317831 TAGTAATAGTAATTA TAAATTAAAAAACTGGATA ATA TATCCAGTTTTTTAATT-A CCGTTAGGTACTGTA TERM 429 317831 - 317847 + T 100 -9.5 -5.27477 | opp_overlap 317819 317831 TTATAAATTAAAAAA CTGGATA ATA TATCCAG TTTTTTAATTACCGT TERM 430 317847 - 317831 - T 100 -9.5 -5.42514 | opp_overlap 317831, overlap 317819 TTATAAATTAAAAAA CTGGATA ATA TATCCAG TTTTTTAATTACCGT SAK_0370 320098 - 317852 - | pencillin-binding protein TERM 431 318460 - 318480 + g 73 -6.9 -4.13014 | TAGCTGCTTTAGTAC CAGTACCAA ATG TTAGTACTG TTTTCAGCATATCCG recU 320684 - 320085 - | Holliday junction-specific endonuclease TERM 432 320438 - 320470 + g 70 -8.6 -3.02144 | opp_overlap 320437, overlap 320446 CACCAGAATAATCAG TAGTAGAAGCTTGT CTAAA ATAAGCTTCTACAA TCTTAGCACGACTAC SAK_0372 320759 - 321277 + | hypothetical protein SAK_0373 321398 - 321730 + | DivIVA domain-containing protein TERM 433 322135 - 322159 + F 100 -11.5 -4.7173 | opp_overlap 322148, overlap 322136 TTGCATAATAGGTTA GTGGCTGAGAT AAC ATCTCAGCCAA TTTTTAACTGTGATG TERM 434 322136 - 322158 + F 100 -15 -3.42315 | opp_overlap 322148, overlap 322135 TGCATAATAGGTTAG TGGCTGAGAT AAC ATCTCAGCCA ATTTTTAACTGTGAT TERM 435 322729 - 322719 - g 80 -6.8 -4.83615 | TACCGTGCAGAAAAA GGTG GTG CACC AATTAAAGAAAACAT TERM 436 323216 - 323206 - g 73 -5.4 -4.56597 | opp_overlap 323206 TTGCGCCTTTAAAAA CTTG GAG CAAG TTTATCCTAACTAGT TERM 437 323289 - 323277 - g 74 -2.7 -5.27923 | overlap 323278 CAAGCTGATAAAAAA CGTAA GCT TTACA ATGGTACTTTAAAAG SAK_0374 322200 - 323354 + | hypothetical protein SAK_0375 323367 - 324830 + | hypothetical protein TERM 438 324860 - 324898 + T 100 -9 -5.47159 | opp_overlap 324870 CCAGTTTTTTGTCTA CACCCTAAAAGTTAGA AAATCAG TCTAACGATTAGGGTG TTTTTTGTATTCGCA TERM 439 324992 - 324960 - T 100 -11.5 -4.78661 | opp_overlap 324960 AGGGAAAAATTAAAA GGATTTTGCTCTCTA TGA TACAGAACAAAATCC TTTGTTTAAATTAAT TERM 440 324960 - 324992 + T 89 -9.3 -4.50761 | opp_overlap 324960 AGGGAAAAATTAAAA GGATTTTGCTCTCTA TGA TACAGAACAAAATCC TTTGTTTAAATTAAT TERM 441 325037 - 325010 - T 100 -15.8 -3.89354 | opp_overlap 325010 TGTTTAAATTAATAA GTCAACTTTTGG AATT CCAAAAGTTGAC TTTTATTTTTTATTA TERM 442 325010 - 325037 + T 100 -15.8 -5.55001 | opp_overlap 325010 TGTTTAAATTAATAA GTCAACTTTTGG AATT CCAAAAGTTGAC TTTTATTTTTTATTA luxS 325537 - 325055 - | S-ribosylhomocysteinase TERM 443 327278 - 327264 - g 71 -4.2 -4.79075 | opp_overlap 327264, overlap 327266 AAAAATCGAACAAAA CTTGGA TTA TCCAGG TAATATTAAGGTAAC SAK_0377 325726 - 327333 + | hypothetical protein TERM 444 327365 - 327334 - f 100 -14.6 -2.78508 | opp_overlap 327335 327340, overlap 327340 GATTTTGCAAAATAG TCAAAAGGAGAGCT TGTT AGCTCTCCTTTTGT TATAGAGTTGACATT TERM 445 327335 - 327364 + F 100 -18.1 -3.36671 | opp_overlap 327334 327340, overlap 327340 ATTTTGCAAAATAGT CAAAAGGAGAGCT TGTT AGCTCTCCTTTTG TTATAGAGTTGACAT TERM 446 327359 - 327340 - f 100 -12.2 -4.35581 | opp_overlap 327335 327340, overlap 327334 GCAAAATAGTCAAAA GGAGAGCT TGTT AGCTCTCC TTTTGTTATAGAGTT TERM 447 327340 - 327359 + F 100 -12.2 -4.78839 | opp_overlap 327340 327334, overlap 327335 GCAAAATAGTCAAAA GGAGAGCT TGTT AGCTCTCC TTTTGTTATAGAGTT TERM 448 327863 - 327880 + G 70 -2.7 -5.14698 | GACTTTATCTGGAGG GCAAAAA CGAC TTTTAGC TTTTGTTTTAACTTT SAK_0378 327462 - 328358 + | ABC transporter, ATP-binding protein SAK_0379 328345 - 329085 + | hypothetical protein TERM 449 329567 - 329557 - g 88 -5.4 -5.61913 | AACAAAGAGAAAAAA TTGC AGA GCAA AATCAGTATATCAAT SAK_0380 329082 - 330167 + | hypothetical protein SAK_0381 330169 - 330759 + | LuxR family DNA-binding response regulator SAK_0382 330809 - 331513 + | hypothetical protein TERM 450 331517 - 331538 + F 76 -5.2 -5.08601 | opp_overlap 331517 331521, overlap 331534 TATAAAAAATAATAG GAGACCTT GAAAAA AAGGTTTC TTTTTGTTAAACTAA TERM 451 331534 - 331564 + F 82 -7.8 -4.41348 | opp_overlap 331517, overlap 331517 GACCTTGAAAAAAAG GTTTCTTTTTGTTA AAC TAATGAGAAGAAAC TTTATTTAGGGAGCA gmk 331680 - 332309 + | guanylate kinase rpoZ 332332 - 332646 + | DNA-directed RNA polymerase subunit omega TERM 452 332662 - 332688 + F 93 -10.2 -4.55826 | opp_overlap 332662 GCAAGTCAAAAGTGA GAGGTTGAAACA TTC TGTATCAGCCTC TTTTCATATTTTAGA TERM 453 333259 - 333247 - g 76 -4.9 -5.0432 | overlap 333258 AATAAAAACAGAAAA GATTT ACA AAATC AACAGAACTCTGTTA priA 332720 - 335110 + | primosome assembly protein PriA fmt 335157 - 336092 + | methionyl-tRNA formyltransferase TERM 454 337003 - 336992 - g 70 -3 -5.1764 | CAGATAAGATAAAAA CTAA AAAG TTAG ATGCAAGTAAAGCTC TERM 455 337259 - 337242 - g 73 -5.7 -4.71426 | opp_overlap 337241 337242 TTTTGAGGAAGAAAA TTTTCAA GTTA TTGAAAA ATTCTTAGAAAACCA sun 336082 - 337404 + | sun protein TERM 456 337431 - 337419 - f 74 -7.7 -3.78775 | GTGTCTAGGAGGAAA CTGAC ATC GTCAG AAAAAAATATATGGA stp1 337442 - 338179 + | serine/threonine protein phosphatase Stp1 TERM 457 338315 - 338292 - g 70 -8.2 -3.32023 | opp_overlap 338291, overlap 338290 TTTAGATAATGAAGA GGTCGCAATA AAAG TATTGCGAAC CAATTATCAAACAGA stk1 338179 - 340134 + | serine/threonine protein kinase Stk1 TERM 458 340137 - 340168 + F 77 -8.3 -3.83026 | opp_overlap 340137 ATTAACTCAATAAAA TTAAAAAGAAGAT GTTAAA GTCTTCTTTTTAA TTTGCTATGGCAGAG TERM 459 340168 - 340137 - f 82 -7.6 -4.72631 | opp_overlap 340137 ATTAACTCAATAAAA TTAAAAAGAAGA TGTTAAAG TCTTCTTTTTAA TTTGCTATGGCAGAG SAK_0390 340295 - 340990 + | hypothetical protein SAK_0391 340987 - 342006 + | sensor histidine kinase SAK_0392 341999 - 342640 + | LuxR family DNA-binding response regulator TERM 460 343872 - 343853 - g 78 -3.6 -5.28983 | TCCAAAATACAAAAA TTCCTTAT GCGA AAAAGGAA TTAGAGCGAGGTGGT SAK_0393 342682 - 344082 + | Cof-like hydrolase/peptidyl-prolyl cis-trans isomerase domain-containing protein SAK_0394 344066 - 344440 + | hypothetical protein TERM 461 344449 - 344476 + T 70 -6.4 -4.323 | opp_overlap 344449 TAAATAAACAAAAAA CCTAGATTTG ATTAATGA CAAGTCTAGG TTTTAAATATTTAAA TERM 462 344476 - 344449 - T 86 -4.2 -5.85425 | opp_overlap 344449 TAAATAAACAAAAAA CCTAGATTTG ATTAATGA CAAGTCTAGG TTTTAAATATTTAAA SAK_0395 345263 - 344487 - | pyruvate formate-lyase-activating enzyme, putative TERM 463 345624 - 345607 - g 81 -5.5 -5.14819 | AAACTAAAAAAGAAA TTGCTGC CTTA GCTGCAA ATATGGTGTCTGACA SAK_0396 345384 - 346139 + | DeoR family transcriptional regulator TERM 464 346809 - 346797 - g 84 -7.7 -4.65916 | TCTAGTTCAAGAAAA CGCTA ATT TAGCG AAAGGAATATTAACT SAK_0397 346258 - 347241 + | SorC family transcriptional regulator TERM 465 347223 - 347268 + F 100 -15.2 -4.19177 | gap 1, opp_overlap 347227 347229 347235, overlap 347226 347227 347229 347235 CACCTTTGTGGATAC TATATATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATA-ATG TTTCTATTACCAAGT TERM 466 347226 - 347266 + F 100 -17.2 -3.6944 | opp_overlap 347227 347229 347235, overlap 347223 347227 347229 347235 CTTTGTGGATACTAT ATATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATAA TGTTTCTATTACCAA TERM 467 347265 - 347227 - f 100 -20.7 -2.85351 | opp_overlap 347226 347223 347227 347229 347235, overlap 347229 347235 TTTGTGGATACTATA TATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATA ATGTTTCTATTACCA TERM 468 347227 - 347265 + F 100 -20.7 -2.81182 | opp_overlap 347227 347229 347235, overlap 347226 347223 347229 347235 TTTGTGGATACTATA TATCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGATA ATGTTTCTATTACCA TERM 469 347263 - 347229 - f 100 -18.9 -2.97747 | opp_overlap 347227 347226 347223 347229 347235, overlap 347227 347235 TGTGGATACTATATA TCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGA TAATGTTTCTATTAC TERM 470 347229 - 347263 + F 100 -18.9 -2.94681 | opp_overlap 347229 347227 347235, overlap 347227 347226 347223 347235 TGTGGATACTATATA TCAAAAGAGCTAGGA ATAAA TCCTAGCTCTTTTGA TAATGTTTCTATTAC TERM 471 347257 - 347235 - f 100 -12.1 -4.40237 | opp_overlap 347229 347227 347226 347223 347235, overlap 347229 347227 TACTATATATCAAAA GAGCTAGGA ATAAA TCCTAGCTC TTTTGATAATGTTTC TERM 472 347235 - 347257 + F 100 -12.1 -4.37067 | opp_overlap 347235 347229 347227, overlap 347229 347227 347226 347223 TACTATATATCAAAA GAGCTAGGA ATAAA TCCTAGCTC TTTTGATAATGTTTC SAK_0398 347445 - 347768 + | PTS system, lactose/cellobiose family IIA subunit SAK_0399 347785 - 348105 + | PTS system lactose/cellobiose family IIB subunit TERM 473 348791 - 348804 + G 75 -5.3 -4.82091 | GGCTCACTTTATGGA GCAAT TGGG ATTGC TTTCTTTATTTCATT SAK_0400 348107 - 349408 + | PTS system lactose/cellobiose family IIC subunit TERM 474 349422 - 349448 + F 100 -10.2 -4.84359 | opp_overlap 349422 349420 AGCTAGCAGATAAGA GGTTGAGGTGTG TAA TGCACCTTAACC TTTTTCTAAAAATGC TERM 475 349474 - 349461 - f 79 -6.7 -4.56775 | opp_overlap 349460 ACCTTTTTCTAAAAA TGCAC ATTT GTGCA ACTTTAGATGTAGCA SAK_0401 349589 - 352045 + | formate acetyltransferase 2 TERM 476 352117 - 352100 - g 81 -2.7 -5.66684 | opp_overlap 352116, overlap 352112 GAAGCTATAAAAAAA TGGCA TCATATAC TGCCA CTAGCAGGTGTAACT SAK_0402 352055 - 352723 + | fructose-6-phosphate aldolase gldA 352791 - 353879 + | glycerol dehydrogenase TERM 477 353916 - 353883 - T 88 -6.9 -5.16071 | opp_overlap 353886, overlap 353886 AATCATCAATAAAAA CAATAGAACCAAG TGAAATTG CTTGGTTCTATTT GTCGTTTTAATATTT TERM 478 353886 - 353913 + T 93 -10 -4.22407 | opp_overlap 353883 353886 CATCAATAAAAACAA TAGAACCAAGTG AAAT TGCTTGGTTCTA TTTGTCGTTTTAATA TERM 479 353913 - 353886 - T 89 -8.6 -4.66002 | opp_overlap 353886, overlap 353883 CATCAATAAAAACAA TAGAACCAAG TGAAATTG CTTGGTTCTA TTTGTCGTTTTAATA TERM 480 354012 - 353965 - T 71 -8.2 -3.28122 | gap 1, opp_overlap 353968, overlap 353967 353979 TAGTATTTAAAGAGA TATAAACTAAAAAAGATCAGACA ACA TATCTAATCTTTTTTAGTT-ATC GTTTACTGAAGATTA TERM 481 354010 - 353967 - T 85 -10.8 -3.20029 | gap 1, opp_overlap 353968, overlap 353965 353979 GTATTTAAAGAGATA TAAACTAAAAAAGATCAGACA ACA TATCTAATCTTTTTTAGTT-A TCGTTTACTGAAGAT TERM 482 353999 - 353979 - T 84 -5.5 -5.4387 | opp_overlap 353968, overlap 353967 353965 ATATAAACTAAAAAA GATCAGACA ACA TATCTAATC TTTTTTAGTTATCGT SAK_0404 354957 - 354031 - | cysteine synthase/cystathionine beta-synthase family protein SAK_0405 355692 - 355048 - | hypothetical protein SAK_0406 355748 - 357037 + | competence protein ComFA, putative SAK_0407 357037 - 357702 + | competence protein ComFC, putative TERM 483 357761 - 357749 - f 77 -7.7 -4.14193 | ATAAGAGTATAGAAA GCGTT AAC AACGC AAGAAAGAGGTACTC yfiA 357779 - 358333 + | ribosomal subunit interface protein TERM 484 358356 - 358375 + T 100 -8.6 -5.41143 | opp_overlap 358356 ACATAATTTAAAAAA TCTCAGGG TTTT CTCTGAGA TTTTTTTAAAACCTA TERM 485 358375 - 358356 - T 84 -6.4 -5.20154 | opp_overlap 358356 ACATAATTTAAAAAA TCTCAGGG TTTT CTCTGAGA TTTTTTTAAAACCTA TERM 486 358636 - 358620 - T 83 -6.6 -4.86216 | ACAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 487 358650 - 358640 - T 79 -6.8 -4.61868 | overlap 358642 358647 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 488 359671 - 359684 + T 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 489 360773 - 360754 - T 95 -12.2 -3.62096 | opp_overlap 360753 360752 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 490 363670 - 363687 + T 86 -4.1 -5.80364 | opp_overlap 363670, overlap 363672 GAGTAGATAAAGGGA GACTAAC TTTG GTTAGCC TTTTTTTATTGGAAT TERM 491 363833 - 363806 - T 100 -15.8 -4.87133 | opp_overlap 363806 ATGTTCTAAATAAAA TCGTCCTAAGTA AGCT TACTTAGGACGA TTTGTTATCTATCTA TERM 492 363806 - 363833 + T 100 -15.8 -4.4458 | opp_overlap 363806 ATGTTCTAAATAAAA TCGTCCTAAGTA AGCT TACTTAGGACGA TTTGTTATCTATCTA SAK_0414 365225 - 363873 - | aspartate kinase SAK_0415 365319 - 365969 + | HAD-superfamily hydrolase, subfamily IA, variant 3 family protein TERM 493 366048 - 366066 + F 100 -7.6 -6.01725 | opp_overlap 366045 366046 366051, overlap 366045 AAATACAAAGCATGA TAATTTGA TAA TCAAATTA TTTTTTATTTTTCTT SAK_0416 366106 - 366897 + | enoyl-CoA hydratase SAK_0417 366993 - 367427 + | MarR family transcriptional regulator TERM 494 367638 - 367648 + G 73 -5.4 -4.57882 | CCGGTTATTCCGCTA GTCA AAT TGAC TTTATTATTGTTGCA fabH 367427 - 368398 + | 3-oxoacyl-(acyl carrier protein) synthase III acpP 368456 - 368680 + | acyl carrier protein TERM 495 368744 - 368781 + F 90 -10.1 -4.03888 | gap 1, opp_overlap 368734 368746 368758 CCAAATCACTTATTA GAGTGAGTATTCAATCAA TCG TTGATCGG-TACTCACTC TTCTTCTTATCAATA fabK 368835 - 369794 + | enoyl-(acyl-carrier-protein) reductase II fabD 369814 - 370740 + | acyl-carrier-protein S-malonyltransferase fabG 370749 - 371483 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 496 371540 - 371526 - g 71 -8.6 -3.18023 | opp_overlap 371532, overlap 371524 CGAGTAGTAGTAACA GGTTAC GGT GTAACC TCACCTATTGGAAAC fabF 371499 - 372731 + | 3-oxoacyl-(acyl carrier protein) synthase II accB 372733 - 373233 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit fabZ 373230 - 373652 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 497 374608 - 374581 - g 78 -9.3 -3.50853 | gap 1, opp_overlap 374584 CGTGTTCAAGTAGAA CACCCTGTTACA GAATT TGTAAC-GGGTG TTGACATCGTTAAAG TERM 498 374584 - 374606 + G 74 -9.2 -3.08015 | opp_overlap 374581 GTTCAAGTAGAACAC CCTGTTACAG AAT TTGTAACGGG TGTTGACATCGTTAA accC 373690 - 375060 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 499 375102 - 375089 - g 75 -5.3 -4.7497 | TTTATTTAGTAAAAA GGATA AATA TATCC GTATTAGTCCAAACA accD 375069 - 375944 + | acetyl-CoA carboxylase subunit beta accA 375937 - 376710 + | acetyl-CoA carboxylase subunit alpha TERM 500 376717 - 376741 + F 77 -8.6 -3.7557 | opp_overlap 376719, overlap 376715 376710 376719 AAATATTAATAGAAA AAGGCTGAGT TATTT ACTCAGCCTA TATTTAGTTTTTCAA TERM 501 376739 - 376719 - f 100 -11.2 -5.13344 | opp_overlap 376717 376715 376710 376719 ATATTAATAGAAAAA GGCTGAGT TATTT ACTCAGCC TATATTTAGTTTTTC TERM 502 376719 - 376739 + F 87 -11.2 -3.44205 | opp_overlap 376719, overlap 376717 376715 376710 ATATTAATAGAAAAA GGCTGAGT TATTT ACTCAGCC TATATTTAGTTTTTC SAK_0429 377180 - 377812 + | hypothetical protein TERM 503 377827 - 377846 + T 93 -10.8 -4.14739 | opp_overlap 377827 AGTTCATAGAAAAAA TGAGTTGG TATA CCAACTCA TTTTAGAGTGCCTAA TERM 504 377846 - 377827 - T 100 -10.8 -5.37043 | opp_overlap 377827 AGTTCATAGAAAAAA TGAGTTGG TATA CCAACTCA TTTTAGAGTGCCTAA serS 379135 - 377858 - | seryl-tRNA synthetase TERM 505 378578 - 378546 - G 84 -12.2 -2.90075 | gap 1, opp_overlap 378542, overlap 378549 TCGTGGTTAACCATA TAAGGAGGGAT-CAC TTCA GTGTACCCCTCCTTA GCGTGTTCATCCAGC TERM 506 378575 - 378549 - G 78 -9.5 -3.59946 | gap 1, opp_overlap 378542, overlap 378546 TGGTTAACCATATAA GGAGGGAT-CAC TTCA GTGTACCCCTCC TTAGCGTGTTCATCC TERM 507 379694 - 379705 + G 80 -2.2 -5.61596 | CAAAATTACTGTCTA TCTG GGCA CAGG TTTTTTTCTACACCT TERM 508 379802 - 379830 + G 80 -8.9 -3.94936 | overlap 379794 TTTTCCCTATTGTCA GTGGGCAGTATTG GTA CATTACTGCTTAC TTTGGTCTATTGGTT SAK_0431 379501 - 380493 + | hypothetical protein TERM 509 380550 - 380494 - T 90 -12.2 -3.26319 | gap 1, opp_overlap 380494 380510, overlap 380510 AAGTTCCCATATTAA TATTAGAG-TTAAAAAATAAGATAGAC TATA GTCTATCTTATTTTTTAAACTTGAATA TTTTTAAAATGGTCT TERM 510 380494 - 380550 + T 100 -14.4 -4.63928 | gap 1, opp_overlap 380494 380510, overlap 380510 AAGTTCCCATATTAA TATTAGAG-TTAAAAAATAAGATAGAC TATA GTCTATCTTATTTTTTAAACTTGAATA TTTTTAAAATGGTCT TERM 511 380510 - 380533 + T 100 -11.2 -5.09426 | opp_overlap 380494 380510, overlap 380494 ATTAGAGTTAAAAAA TAAGATAGAC TATA GTCTATCTTA TTTTTTAAACTTGAA TERM 512 380533 - 380510 - T 100 -11.2 -5.13473 | opp_overlap 380510 380494, overlap 380494 ATTAGAGTTAAAAAA TAAGATAGAC TATA GTCTATCTTA TTTTTTAAACTTGAA SAK_0432 380833 - 380531 - | hypothetical protein TERM 513 381005 - 380973 - R 72 -7.2 -3.95554 | gap 1, opp_overlap 380973 380972 380976, overlap 380976 TTATGTAATAAAATA TAAGAGATGGAATAC TATT GTAA-CCATCTCTTA GTTTTATTACATCAC SAK_0433 381923 - 381012 - | PTS system mannose/fructose/sorbose family IIDsubunit SAK_0434 382750 - 381938 - | PTS system lactose/cellobiose family IIC subunit TERM 514 382543 - 382503 - G 72 -7.5 -3.75762 | overlap 382501 TTAACCAAAATAATA GCAGCAGCAACAGAGGC AAGTGCA GCGTCTGGTGCTACGGC AGCTCCGATATTTGC SAK_0435 383793 - 382783 - | PTS system mannose/fructose/sorbose family IIA subunit SAK_0436 384907 - 384095 - | Cof-like hydrolase SAK_0437 384996 - 385580 + | hypothetical protein TERM 515 385575 - 385597 + F 82 -7.8 -4.35926 | opp_overlap 385575 385570 GGAATATTAATGGAA GACTAACC ACAACAG GGTTAGTC TTTTAGGTTTGAAGT SAK_0438 385670 - 386281 + | hypothetical protein TERM 516 386303 - 386332 + F 100 -7.3 -5.42862 | opp_overlap 386303 TTTTGTTAATATATA TTAGTCGTTCGTA AATA TAAGAACGATTAA TTTTTTTAAAAGTGT SAK_0439 386573 - 387805 + | AzgA family purine transporter TERM 517 387869 - 387823 - f 89 -10.4 -3.88787 | opp_overlap 387833, overlap 387826 387833 TTATAGTTTGATAAA TAAGATAAAAGGAAATCAGATT TGT AGCCTGGTTTCCTTTTTTCTTA AGAAAAGTGAAGAAA TERM 518 387866 - 387826 - f 77 -7.7 -4.07133 | opp_overlap 387833, overlap 387823 387833 TAGTTTGATAAATAA GATAAAAGGAAATCAGATT TGT AGCCTGGTTTCCTTTTTTC TTAAGAAAAGTGAAG TERM 519 387833 - 387859 + F 93 -6.6 -5.4505 | opp_overlap 387826 387823 387833 ATAAATAAGATAAAA GGAAATCAGATT TGT AGCCTGGTTTCC TTTTTTCTTAAGAAA TERM 520 387859 - 387833 - f 70 -4.4 -4.86029 | opp_overlap 387833, overlap 387826 387823 ATAAATAAGATAAAA GGAAATCAGATT TGT AGCCTGGTTTCC TTTTTTCTTAAGAAA SAK_0440 387888 - 388397 + | hypothetical protein SAK_0441 388390 - 388911 + | acetyltransferase SAK_0442 388920 - 390227 + | hypothetical protein TERM 521 390261 - 390230 - T 78 -6.9 -4.48823 | gap 1, opp_overlap 390230 390239 390260, overlap 390239 AACTAATCCATAAAA TATAAAAAAGAGCA TTATT TGCTCTTT-TTATA TTTAGAGTAGATATT TERM 522 390239 - 390253 + T 83 -5.7 -5.19879 | opp_overlap 390239 390230, overlap 390230 ATAAAATATAAAAAA GAGCA TTATT TGCTC TTTTTATATTTAGAG TERM 523 390253 - 390239 - T 90 -5.7 -5.65678 | opp_overlap 390230 390239, overlap 390230 ATAAAATATAAAAAA GAGCA TTATT TGCTC TTTTTATATTTAGAG SAK_0443 390587 - 390291 - | hypothetical protein SAK_0444 391003 - 390584 - | HIT family protein TERM 524 391322 - 391304 - H 77 -3.2 -5.67711 | TAAATAAAATAAAAA TGATAATT GAG ATTTATCA TAGAAGGAAAACTAT SAK_0445 391339 - 391842 + | hypothetical protein TERM 525 391930 - 391912 - f 93 -8.9 -4.81551 | opp_overlap 391905 391912 TATTGATACTAAAAA GACACCT TTTTG AGGTGTC TTTTTTTGTCCGATG TERM 526 391912 - 391930 + F 100 -9.6 -5.626 | opp_overlap 391912, overlap 391905 TATTGATACTAAAAA GACACCTT TTT GAGGTGTC TTTTTTTGTCCGATG ecsA 392151 - 392876 + | ABC transporter, ATP-binding protein SAK_0447 392878 - 393912 + | ABC transporter, permease protein EcsB, putative SAK_0448 393970 - 394770 + | hypothetical protein trmB 394760 - 395395 + | tRNA (guanine-N(7))-methyltransferase TERM 527 395812 - 395790 - f 80 -7.6 -4.30477 | opp_overlap 395790 TAAATAATACAGAAA GGGGCGGAGT TTT ACTTCGCCTC TTATGTGTGTGATTC TERM 528 395790 - 395812 + F 95 -12 -3.66727 | opp_overlap 395790 TAAATAATACAGAAA GGGGCGGAGT TTT ACTTCGCCTC TTATGTGTGTGATTC SAK_0451 395978 - 396361 + | hypothetical protein nusA 396397 - 397548 + | transcription elongation factor NusA ylxR 397570 - 397866 + | hypothetical protein SAK_0454 397859 - 398161 + | hypothetical protein TERM 529 400311 - 400301 - g 73 -6.8 -4.26634 | AAAACAACGCCAAAA CACG CAA CGTG TTAGCCTCGAGAACT infB 398181 - 400964 + | translation initiation factor IF-2 TERM 530 401020 - 401036 + F 75 -8 -3.69354 | opp_overlap 401019 AAATACAAAATTATG GCTAGG CTCGT CCTAGC TTTCAAGTTATGAGC rbfA 401073 - 401423 + | ribosome-binding factor A TERM 531 401482 - 401439 - T 83 -9.4 -3.83758 | gap 1, opp_overlap 401449, overlap 401449 AATCAAGATTAAGAA TAATAAAAAATAAACCATG TCAAAAT CATGGTTTATTTTTTAT-A GCTTTAGAGTTGAGA TERM 532 401473 - 401449 - T 100 -7.3 -5.70522 | opp_overlap 401449, overlap 401439 AAGAATAATAAAAAA TAAACCATG TCAAAAT CATGGTTTA TTTTTTATAGCTTTA TERM 533 401449 - 401473 + T 100 -7.3 -5.33866 | opp_overlap 401449 401439 AAGAATAATAAAAAA TAAACCATG TCAAAAT CATGGTTTA TTTTTTATAGCTTTA SAK_0457 402511 - 401507 - | GDXG lipolytic enzyme family protein copY 402675 - 403091 + | transcriptional repressor CopY TERM 534 404582 - 404562 - g 73 -6.2 -4.52214 | gap 1, opp_overlap 404562, overlap 404556 404565 AAAGCAAAAGAGAAA GAACTTCCC TTAA GGGAAG-TC ATGGCTTTTAAAAAT TERM 535 404580 - 404565 - g 83 -9 -4.32763 | opp_overlap 404562, overlap 404556 404562 GCAAAAGAGAAAGAA CTTCCC TTAA GGGAAG TCATGGCTTTTAAAA copA 403104 - 405338 + | copper-translocating P-type ATPase TERM 536 405553 - 405526 - g 83 -9.4 -3.88464 | GGAAAAACATTCAAA TGTCTTTTAAAA CGTT CTTTAAAAGACA CAAAGTATTCACTAG SAK_0460 405379 - 405585 + | copper transporter, copper-binding protein, putative SAK_0461 405695 - 406309 + | hypothetical protein TERM 537 406392 - 406382 - g 81 -5.4 -5.14626 | ATGATGAAAAGAAAA TTCC AAA GGAA AATATCCAAGCTATT SAK_0462 406324 - 407136 + | Cof-like hydrolase TERM 538 407159 - 407187 + F 89 -7.6 -4.93877 | opp_overlap 407153 407159 ATAGAATAATAAAGG GAACTTTAAACA CTGTT TGTTTAGGGTTC TTTTGTTTAATAAAC TERM 539 407975 - 407959 - g 100 -9.5 -4.99568 | TAAGATGAAAGAAAA CCTTATC AAT GATAAGG AGCAAGCTTTCTTAT TERM 540 408356 - 408344 - g 70 -2.7 -5.08824 | opp_overlap 408329, overlap 408329 GCTTTATTTAAAAAA GCTTT ATC AAAAC CTATCAAAACTTATG polA 407249 - 409891 + | DNA polymerase I SAK_0464 409921 - 410361 + | CoA-binding domain-containing protein SAK_0465 410443 - 410922 + | FUR family transcriptional regulator TERM 541 410939 - 410917 - f 74 -2.1 -5.59879 | opp_overlap 410917, overlap 410904 GATAAATATAAAAAA GATTGAA ACGTAATTG TTCAATC TTTTTTTGTTTATAG TERM 542 410917 - 410939 + F 81 -2.1 -6.02919 | gap 1, opp_overlap 410917 410904 GATAAATATAAAAAA GATTGAAACG TAAT TGTT-CAATC TTTTTTTGTTTATAG TERM 543 411926 - 411902 - g 95 -7.3 -5.28481 | TATGGAAGTAAAAAA TTCTCTAAAGA TGG CCTTTAAAGAA AAAGTAGACGTCCCA SAK_0466 411075 - 412640 + | cell wall surface anchor family protein TERM 544 412696 - 412736 + F 80 -10.7 -2.71364 | opp_overlap 412703, overlap 412703 ATTGAGGGTTATCGT GGTAAAATAGTGTTATACT AGA GGTATAGCACTATTTTGAC TCATTAGGAGAGTAG TERM 545 412729 - 412703 - f 71 -6.7 -4.08767 | opp_overlap 412703 412696 GTTATCGTGGTAAAA TAGTGTTATAC TAGAG GTATAGCACTA TTTTGACTCATTAGG TERM 546 412703 - 412729 + F 90 -9.6 -4.23892 | opp_overlap 412703, overlap 412696 GTTATCGTGGTAAAA TAGTGTTATACT AGA GGTATAGCACTA TTTTGACTCATTAGG SAK_0467 412753 - 413439 + | DNA-binding response regulator TERM 547 413813 - 413802 - g 70 -3 -5.09426 | GTGAACGCGAAAAAA CAAT GATG ATTG CACAACTTTCACATG SAK_0468 413441 - 414478 + | sensor histidine kinase TERM 548 414465 - 414510 + T 100 -14.5 -4.03978 | gap 1, opp_overlap 414476, overlap 414476 TCTCTTTAGTACTTA AATTAC-AAAAATAGCTAGGAA TTA TTCCTAGCTATTTTTTGTAATG TTTCTATAAAAGATT TERM 549 414498 - 414476 - T 100 -13.6 -5.04325 | opp_overlap 414465 414476 CTTAAATTACAAAAA TAGCTAGGAA TTA TTCCTAGCTA TTTTTTGTAATGTTT TERM 550 414476 - 414498 + T 100 -13.6 -5.38321 | opp_overlap 414476, overlap 414465 CTTAAATTACAAAAA TAGCTAGGAA TTA TTCCTAGCTA TTTTTTGTAATGTTT SAK_0469 415232 - 414492 - | hypothetical protein tgt 415419 - 416561 + | queuine tRNA-ribosyltransferase SAK_0471 416668 - 416979 + | hypothetical protein SAK_0472 416986 - 417525 + | BioY family protein TERM 551 417584 - 417547 - f 79 -10.1 -2.88999 | opp_overlap 417549, overlap 417559 TTGCTATATATTAGA TGGACTAGTAAATCTAA AAAT TTAGATTTACTAGTCTT TTTTGTGCATAAAAT TERM 552 417549 - 417582 + F 100 -17.1 -5.28176 | opp_overlap 417547 417559 GCTATATATTAGATG GACTAGTAAATCTAA AAAT TTAGATTTACTAGTC TTTTTTGTGCATAAA SAK_0473 417664 - 418440 + | metallo-beta-lactamase family protein SAK_0474 418440 - 418946 + | cytidine/deoxycytidylate deaminase family protein pgi 419218 - 420567 + | glucose-6-phosphate isomerase TERM 553 420610 - 420578 - f 100 -16.6 -3.32832 | opp_overlap 420578 420585, overlap 420585 TTTAAAAATATCTAA CTAAAAAGTTCCTC AAAGA GAGGAACTTTTTAG TTTTGTTGTAGGATA TERM 554 420578 - 420610 + F 100 -16.6 -4.78237 | opp_overlap 420578 420585, overlap 420585 TTTAAAAATATCTAA CTAAAAAGTTCCTC AAAGA GAGGAACTTTTTAG TTTTGTTGTAGGATA TERM 555 420585 - 420603 + F 95 -8.9 -5.17786 | opp_overlap 420578 420585, overlap 420578 ATATCTAACTAAAAA GTTCCTC AAAGA GAGGAAC TTTTTAGTTTTGTTG TERM 556 420603 - 420585 - f 93 -8.9 -4.89009 | opp_overlap 420585 420578, overlap 420578 ATATCTAACTAAAAA GTTCCTC AAAGA GAGGAAC TTTTTAGTTTTGTTG TERM 557 420660 - 420634 - f 100 -9.4 -4.94972 | TAGGATAACTAAAAA CCCACTAGCACC GGT AGCGATAGTGGG TTGGAAAAAGGGTTG SAK_0476 420889 - 421416 + | 5-formyltetrahydrofolate cyclo-ligase family protein SAK_0477 421413 - 422084 + | rhomboid family protein SAK_0478 422216 - 423259 + | bmp family protein TERM 558 423287 - 423345 + T 100 -20.3 -3.88577 | gap 1, opp_overlap 423294 423307, overlap 423289 423294 423307 GGAACAATAAGTTCT TCA-TCAAGTACAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTGTACTTGACTCA TATTTTACTTCTTAG TERM 559 423289 - 423342 + T 100 -24.5 -2.9911 | opp_overlap 423294 423307, overlap 423287 423294 423307 AACAATAAGTTCTTC ATCAAGTACAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTGTACTTGAC TCATATTTTACTTCT TERM 560 423337 - 423294 - T 100 -23 -3.14881 | opp_overlap 423289 423287 423294 423307, overlap 423307 TAAGTTCTTCATCAA GTACAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTGTAC TTGACTCATATTTTA TERM 561 423294 - 423337 + T 100 -23 -3.15961 | opp_overlap 423294 423307, overlap 423289 423287 423307 TAAGTTCTTCATCAA GTACAATAAAAAAGTTTCCT ATTT AGGAAACTTTTTTATTGTAC TTGACTCATATTTTA TERM 562 423307 - 423324 + T 100 -8.5 -5.59534 | opp_overlap 423294 423307, overlap 423294 423289 423287 AAGTACAATAAAAAA GTTTCCT ATTT AGGAAAC TTTTTTATTGTACTT TERM 563 423324 - 423307 - T 100 -8.5 -5.59534 | opp_overlap 423307 423294 423289 423287, overlap 423294 AAGTACAATAAAAAA GTTTCCT ATTT AGGAAAC TTTTTTATTGTACTT galU 424249 - 423350 - | UTP-glucose-1-phosphate uridylyltransferase TERM 564 423567 - 423577 + g 80 -6.8 -4.84529 | AGTTGAATTTCATTT CCTG CAC CAGG TTTTTGAGTTTCTAA gpsA 425302 - 424286 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase rnpA 425472 - 425801 + | ribonuclease P SAK_0482 425814 - 426629 + | membrane protein oxaA, putative SAK_0483 426637 - 427458 + | R3H domain-containing protein TERM 565 427480 - 427456 - T 71 -8.7 -2.83867 | opp_overlap 427462, overlap 427462 GTAGTTACTAAGAAG TAAAAAGAGGT CTC ACCTCTTTTTT TCTTGCGTCCGATTT TERM 566 427474 - 427462 - T 89 -7.7 -5.00339 | opp_overlap 427462, overlap 427456 ACTAAGAAGTAAAAA GAGGT CTC ACCTC TTTTTTTCTTGCGTC TERM 567 427462 - 427474 + T 100 -7.7 -5.8187 | opp_overlap 427462 427456 ACTAAGAAGTAAAAA GAGGT CTC ACCTC TTTTTTTCTTGCGTC TERM 568 427779 - 427763 - T 83 -6.6 -4.89605 | CAAAAAAACAATAAA TCTGTC AGCGA GACAGA AAAGAGCAAAGCTCA TERM 569 427793 - 427783 - T 79 -6.8 -4.61868 | overlap 427785 427790 CAGCGAGACAGAAAA GAGC AAA GCTC AAACTTTTAATGAGA TERM 570 428814 - 428827 + T 74 -6.7 -4.1891 | ACATCCTTCTGACCG GCCTA GAGA TAGGC TTTCTCTTCGGAGCA TERM 571 429916 - 429897 - T 95 -12.2 -3.62096 | opp_overlap 429896 429895 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 572 432911 - 432896 - T 95 -9 -5.10877 | opp_overlap 432907 ATAAGAAAGTAAAAA CCAAGC AATA GCTTGG GCGCGTAGCTCAGGT TERM 573 433077 - 433096 + T 100 -9.4 -6.09196 | opp_overlap 433077 ACTATTCTTAAAAAA GTAGAAAG ATCA CTTTCTAC TTTTTTTATTTTAAG TERM 574 433096 - 433077 - T 100 -9.4 -5.03715 | opp_overlap 433077 ACTATTCTTAAAAAA GTAGAAAG ATCA CTTTCTAC TTTTTTTATTTTAAG TERM 575 433175 - 433160 - T 91 -7.6 -5.16841 | opp_overlap 433160 TGATATTAATAAAAA CACACT ATTT AGTGTG TTAGTTAGCGCTTTT SAK_0492 433713 - 433180 - | hypothetical protein recX 434573 - 433797 - | recombination regulator RecX rumA 434672 - 436027 + | 23S rRNA (uracil-5-)-methyltransferase RumA SAK_0495 436296 - 437060 + | hypothetical protein SAK_0496 437094 - 437522 + | acetyltransferase TERM 576 437589 - 437539 - f 100 -22.4 -3.66378 | opp_overlap 437552, overlap 437542 437546 437552 TACATGCTATTTAAA CTATCAATTAAAAGGTCTCTCAGT ATT ACTGAGAGACCTTTTAATTAACAA AAAATTAAATTAAAA TERM 577 437586 - 437542 - f 100 -24.1 -2.94322 | opp_overlap 437552, overlap 437539 437546 437552 ATGCTATTTAAACTA TCAATTAAAAGGTCTCTCAGT ATT ACTGAGAGACCTTTTAATTAA CAAAAAATTAAATTA TERM 578 437582 - 437546 - f 100 -22.7 -3.33483 | opp_overlap 437552, overlap 437542 437539 437552 TATTTAAACTATCAA TTAAAAGGTCTCTCAGT ATT ACTGAGAGACCTTTTAA TTAACAAAAAATTAA TERM 579 437576 - 437552 - f 100 -17.3 -4.47217 | opp_overlap 437552, overlap 437546 437542 437539 AACTATCAATTAAAA GGTCTCTCAGT ATT ACTGAGAGACC TTTTAATTAACAAAA TERM 580 437552 - 437576 + F 100 -17.3 -4.4078 | opp_overlap 437552 437546 437542 437539 AACTATCAATTAAAA GGTCTCTCAGT ATT ACTGAGAGACC TTTTAATTAACAAAA TERM 581 438161 - 438146 - f 77 -7.6 -3.97636 | opp_overlap 438144 438146 AGGTGAAGCCAGAAA GCAAGT CATC ACTTGC TGTTCTTGATACATC TERM 582 438146 - 438161 + F 71 -7.6 -3.44998 | opp_overlap 438146, overlap 438144 AGGTGAAGCCAGAAA GCAAGT CATC ACTTGC TGTTCTTGATACATC TERM 583 439430 - 439412 - f 75 -8.2 -3.5861 | ACCTATAATAATCAA TACCAAAC AAT GTCTGGTA CAAGTATGGCTTCAC TERM 584 441465 - 441437 - f 82 -7.5 -4.35461 | opp_overlap 441437 GCAATATGATGAAAA GTTCAGTTTAACA TTA TGTTAAGCTGGAC TTTTAGGGTATTGAC TERM 585 441437 - 441465 + F 100 -11.9 -4.1964 | opp_overlap 441437 GCAATATGATGAAAA GTTCAGTTTAACA TTA TGTTAAGCTGGAC TTTTAGGGTATTGAC SAK_0498 441613 - 442521 + | glycosyl transferase, group 2 family protein TERM 586 442648 - 442634 - f 82 -8.6 -4.11363 | AATAATATTAAAGAA CAAGGT AGA ACCTTG GCTCGCATTAATTTC TERM 587 442677 - 442696 + F 100 -12.2 -5.79595 | opp_overlap 442677 TCGGGTTTTGGAAAA GGAGTAGC AGTC GCTACTCC TTTTTTGTTTTACAC TERM 588 442696 - 442677 - f 100 -12.2 -4.07568 | opp_overlap 442677 TCGGGTTTTGGAAAA GGAGTAGC AGTC GCTACTCC TTTTTTGTTTTACAC TERM 589 442743 - 442773 + F 79 -5.1 -5.23765 | gap 1, opp_overlap 442752, overlap 442752 TAAAGCCTTTTTTTC TTATAAAAATTAAG CTTG CTTAATTTTT-TAA TTTTTATATTCTTTA TERM 590 442752 - 442765 + F 81 -3.9 -5.56112 | opp_overlap 442752, overlap 442743 TTTTTCTTATAAAAA TTAAG CTTG CTTAA TTTTTTAATTTTTAT TERM 591 443436 - 443448 + G 70 -3.4 -5.06103 | GCTATTCATGCGCGA TCGT ATGGA ACGA TTTTTTCAACCTTAT nrdF 443076 - 444086 + | ribonucleotide-diphosphate reductase subunit beta nrdI 444087 - 444500 + | ribonucleotide reductase stimulatory protein SAK_0501 444502 - 446670 + | ribonucleotide-diphosphate reductase subunit alpha SAK_0502 446733 - 449900 + | hypothetical protein SAK_0503 449913 - 450302 + | pyridoxamine 5'-phosphate oxidase family protein TERM 592 450373 - 450321 - f 74 -7 -4.21787 | opp_overlap 450327 450369, overlap 450322 AAAAAAGCCTCAAAA TGAACTGCACCCCAAAAGTTAGAC AAAAA ATCTAACGATTGGGGTGCTTTTCT GATGAAATTAAGTTA TERM 593 450372 - 450322 - f 83 -10.5 -3.11445 | opp_overlap 450327 450369, overlap 450321 AAAAAGCCTCAAAAT GAACTGCACCCCAAAAGTTAGAC AAAAA ATCTAACGATTGGGGTGCTTTTC TGATGAAATTAAGTT TERM 594 450327 - 450367 + F 100 -12.7 -4.47328 | opp_overlap 450322 450321 GCCTCAAAATGAACT GCACCCCAAAAGTTAGA CAAAAAA TCTAACGATTGGGGTGC TTTTCTGATGAAATT SAK_0504 450375 - 450911 + | IS861, transposase orfA TERM 595 451711 - 451679 - g 100 -12.2 -4.74084 | opp_overlap 451679, overlap 451668 AAAGCAAAACTAAAA GGACTTAGTCCTGT GCAAT ACAGAACTAAATCC TTCACTTAAAATAAA SAK_0505 450887 - 451720 + | IS861, transposase orfB SAK_0506 452239 - 451781 - | hypothetical protein SAK_0507 452633 - 452511 - | hypothetical protein SAK_0508 452794 - 452633 - | hypothetical protein SAK_0509 453198 - 452881 - | 4-carboxymuconolactone decarboxylase, putative SAK_0510 453617 - 453222 - | cupin domain-containing protein SAK_0513 456020 - 455178 - | aldo/keto reductase family oxidoreductase TERM 596 456108 - 456093 - R 72 -3.3 -5.29385 | opp_overlap 456093 AAGTCAAGGAAAAAA CTAAC ACTCAG GTTAG TTTTTTAATGGTTTG TERM 597 456093 - 456108 + r 72 -3.3 -5.243 | opp_overlap 456093 AAGTCAAGGAAAAAA CTAAC ACTCAG GTTAG TTTTTTAATGGTTTG SAK_0514 456968 - 456105 - | cation efflux transporter TERM 598 457068 - 457057 - H 87 -4.4 -5.72622 | overlap 457062 457063 GCTAGAAACAAAAAA GAAC ACTT GTTC AATACTGAACAAAAC SAK_0515 457100 - 457624 + | TetR family transcriptional regulator SAK_0516 459012 - 457819 - | AraC family transcriptional regulator TERM 599 457849 - 457868 + g 100 -7.9 -5.50499 | CTTTTGCTTATATTC TAGTGGG CTAATT CCCACTA TTTTTTTAAATGTCC TERM 600 459245 - 459216 - H 100 -13.9 -3.36492 | opp_overlap 459211 459220 TGTTTAAGCCTATAA TTTACTCTGTATA GAGT TATACAGAGTAAA GGAGAATATTATGTT SAK_0517 459256 - 462318 + | C protein alpha-antigen TERM 601 462443 - 462481 + T 100 -15.6 -3.315 | opp_overlap 462448, overlap 462448 GAGATTAATTCTTGA AAAAAGCCTATCGAGATT ATT AATTTCGATAGGCTTTTG ATTTTGTGTAAGCGT TERM 602 462448 - 462476 + T 100 -15.5 -4.75518 | opp_overlap 462448, overlap 462443 TAATTCTTGAAAAAA GCCTATCGAGATT ATT AATTTCGATAGGC TTTTGATTTTGTGTA TERM 603 462476 - 462448 - T 100 -13.3 -5.03145 | opp_overlap 462448 462443 TAATTCTTGAAAAAA GCCTATCGAGATT ATT AATTTCGATAGGC TTTTGATTTTGTGTA TERM 604 462493 - 462520 + T 90 -12.2 -3.26471 | gap 1 TTTGATTTTGTGTAA GCGTCCAATATAC CTT GT-TATTGGACGC TTACTATAAAACTGA TERM 605 463496 - 463473 - T 100 -9 -5.44638 | AGAACAAAAATAAAA GAAACCCTAT TATA ATAAGGTTTC ACTCATATATTTTCT SAK_0520 463957 - 463652 - | hypothetical protein SAK_0521 464297 - 463959 - | hypothetical protein SAK_0522 465082 - 464318 - | hypothetical protein TERM 606 464996 - 465022 + g 76 -2.3 -5.55664 | gap 1 GATAAGCCAATTCGT CGCTTGGACACC TCCT GGTCTT-AAGCG TTTTTTTCCTAGTCG TERM 607 465409 - 465429 + G 75 -5.5 -4.73614 | TTAACGATTGTTTGA TTAAAGCAG GAG CTGATTTAA TTTATTTTGGTAATG SAK_0523 465273 - 467333 + | PTS system IIA domain-containing protein TERM 608 467379 - 467331 - f 71 -7.7 -3.4519 | opp_overlap 467337, overlap 467330 467337 GAAGAAAAGGAAAAT TAGTAAGACCAAAATACTTCA TAAAAAC TGAAGTATTTTGGTCTTTTTG TGTGAACATTTTAAA TERM 609 467373 - 467337 - f 100 -15.5 -3.39207 | opp_overlap 467337, overlap 467331 467330 AAGGAAAATTAGTAA GACCAAAATACTTCA TAAAAAC TGAAGTATTTTGGTC TTTTTGTGTGAACAT TERM 610 467337 - 467373 + F 100 -15.5 -4.9725 | opp_overlap 467337 467331 467330 AAGGAAAATTAGTAA GACCAAAATACTTCA TAAAAAC TGAAGTATTTTGGTC TTTTTGTGTGAACAT SAK_0524 467448 - 467897 + | PTS system, galactitol-specific IIA component, putative SAK_0525 467916 - 468194 + | PTS system, galactitol-specific IIB component, putative SAK_0526 468206 - 469543 + | PTS system, galactitol-specific IIC component, putative TERM 611 469843 - 469829 - g 74 -5 -4.76312 | overlap 469821 TAGAACATTGAAAAA TCAACC AGA GATTGA TACAGGCATCATAAG rhaD 469566 - 470396 + | rhamnulose-1-phosphate aldolase TERM 612 470471 - 470425 - f 80 -9.6 -3.42459 | opp_overlap 470430, overlap 470427 470430 470432 470438 GATGGATAATAGTAA CAGGAGACCAAAATGCTTCACT TTG AGTGAAGTATTTTGGTCTTTTT ATGAAATCGATTCCA TERM 613 470469 - 470427 - f 90 -12.2 -3.27771 | opp_overlap 470430, overlap 470425 470430 470432 470438 TGGATAATAGTAACA GGAGACCAAAATGCTTCACT TTG AGTGAAGTATTTTGGTCTTT TTATGAAATCGATTC TERM 614 470430 - 470466 + F 100 -20.5 -4.85599 | opp_overlap 470427 470425 470430 470432 470438 ATAATAGTAACAGGA GACCAAAATGCTTCACT TTG AGTGAAGTATTTTGGTC TTTTTATGAAATCGA TERM 615 470466 - 470430 - f 100 -18.3 -2.81181 | opp_overlap 470430, overlap 470427 470425 470432 470438 ATAATAGTAACAGGA GACCAAAATGCTTCACT TTG AGTGAAGTATTTTGGTC TTTTTATGAAATCGA TERM 616 470464 - 470432 - f 100 -15.1 -2.94464 | opp_overlap 470430, overlap 470430 470427 470425 470438 AATAGTAACAGGAGA CCAAAATGCTTCACT TTG AGTGAAGTATTTTGG TCTTTTTATGAAATC TERM 617 470458 - 470438 - f 78 -6.9 -4.38774 | opp_overlap 470430, overlap 470432 470430 470427 470425 AACAGGAGACCAAAA TGCTTCACT TTG AGTGAAGTA TTTTGGTCTTTTTAT SAK_0528 470531 - 470995 + | PTS system, galactitol-specific IIA component, putative SAK_0529 471008 - 472339 + | PTS system, galactitol-specific IIC component SAK_0530 472341 - 472625 + | PTS system, galactitol-specific IIB component, putative TERM 618 472652 - 472680 + T 100 -6.8 -5.79595 | TAATGTTTTTTGTAA GTAAGGCTGATA CATGA TTTTAGCCTTAC TTTTTTCTTTTGAGA SAK_0531 473740 - 472910 - | AraC family transcriptional regulator TERM 619 474958 - 474936 - g 73 -3.4 -5.07652 | TCTGCCAAAACAAAA CATCCACAAG CCG CTTGGAAATG GGTTGAATACTTAAG TERM 620 475094 - 475080 - g 79 -7.2 -4.37092 | opp_overlap 475079 475080 475082 ACTTTTGCTATAAAA CATTTC GTT GAAATG ATTGATTATGCACAA SAK_0532 473979 - 475256 + | sugar ABC transporter, sugar-binding protein, putative SAK_0533 475340 - 476230 + | sugar ABC transporter, permease protein, putative TERM 621 476310 - 476323 + G 78 -5.3 -4.9138 | ATTTTTGTAGCTCTA GGAAT GATC ATTCC TTTTATTTGGATGGT SAK_0534 476244 - 477077 + | ABC transporter, permease protein SAK_0535 477087 - 479288 + | alpha-galactosidase, putative galT 480563 - 482044 + | galactose-1-phosphate uridylyltransferase galE 482046 - 483041 + | UDP-glucose 4-epimerase TERM 622 483199 - 483187 - g 73 -3.4 -5.15167 | overlap 483188 TATTATTAAGAAAAA CTTC GGAGA GAAG CTGGCATTCCTCTAC SAK_0539 483167 - 484036 + | aldose 1-epimerase, interruption-N SAK_0540 484041 - 484424 + | IS1381 transposase protein A SAK_0541 484457 - 484846 + | IS1381 transposase protein B SAK_0542 484866 - 485060 + | aldose 1-epimerase, interruption-C SAK_0543 485251 - 485505 + | hypothetical protein TERM 623 485744 - 485730 - g 88 -3.4 -5.82316 | ATCACCGAAAAAAAA GGCTCC TGA AGCGCC AAAGGCAGTCGATCT SAK_0544 485614 - 485925 + | hypothetical protein TERM 624 486137 - 486158 + F 100 -13.1 -5.56264 | opp_overlap 486134 GTAATACGAAATTCG TCCCTGTCA GAAT TGACAGGGA TTTTTTGTATTTAGG SAK_0545 486193 - 486771 + | acetyltransferase SAK_0546 486768 - 487460 + | hypothetical protein TERM 625 488534 - 488548 + G 70 -6.4 -4.0942 | overlap 488535 488540 AGAACGAACAGGCGT TGTGGT TGA ACCACG TTTATCTACTCAATG valS 487482 - 490136 + | valyl-tRNA synthetase TERM 626 490140 - 490157 + T 87 -7.7 -4.82667 | opp_overlap 490140, overlap 490142 AATAATGATTGAGAA TGCAGCC GAGA GGCTGTA TTTTTAGTATAGTAG TERM 627 490142 - 490155 + T 79 -8.1 -4.02905 | opp_overlap 490140, overlap 490140 TAATGATTGAGAATG CAGCC GAGA GGCTG TATTTTTAGTATAGT TERM 628 490347 - 490328 - T 100 -10.8 -5.95946 | opp_overlap 490338 490339 GTAATAATAAAAAAA CTTCTCTC AATT GAGAGAAG GACACTATTCTCAGT SAK_0548 491301 - 490372 - | hypothetical protein TERM 629 491473 - 491450 - H 76 -5.3 -5.00616 | opp_overlap 491450 TTTGTGGTTAAAAAA GGTTGTGGA TTGCCG TCTACAACC TTTTTCATTTAATAG TERM 630 491450 - 491473 + H 91 -8.2 -5.01811 | opp_overlap 491450 TTTGTGGTTAAAAAA GGTTGTGGAT TGCC GTCTACAACC TTTTTCATTTAATAG TERM 631 491558 - 491515 - H 74 -7.8 -3.76486 | opp_overlap 491515, overlap 491511 ACTTAAATAAATCAA TCAATATATTGTGTCTGA GTTGTTTT TAAAACACAATATATTGA TTTTGGAGGATATAC TERM 632 492105 - 492090 - g 70 -3.2 -4.98857 | ATGGAAGCACAAAAA TCGGTA TTTA TTCCGA TGACACAAGTGATTA SAK_0549 491718 - 492677 + | Gfo/Idh/MocA family oxidoreductase TERM 633 492730 - 492703 - f 72 -7.1 -3.78778 | opp_overlap 492703 CTAGCATATTAATAA GGAGTACTAGA TGTTAT TTTAGTACTCC TTTTTTGTTTTGCTC TERM 634 492703 - 492730 + F 100 -9.3 -5.83211 | opp_overlap 492703 CTAGCATATTAATAA GGAGTACTAGA TGTTAT TTTAGTACTCC TTTTTTGTTTTGCTC SAK_0550 492838 - 493740 + | CorA family metal ion transporter TERM 635 493781 - 493794 + F 100 -6.7 -5.60993 | TTAGTTTAGTTTTAA GCATG GCAA CATGC TTTTTTTGTACAAAG SAK_0551 493900 - 494964 + | hypothetical protein asnA 495079 - 496071 + | asparagine synthetase AsnA TERM 636 496076 - 496101 + T 100 -12.7 -4.1196 | opp_overlap 496076, overlap 496062 ATATATTATAAAAAA TCAGCCAAGCA GTTT TGTTTGGCTGA TTTTAACAATAAGTT TERM 637 496101 - 496076 - T 100 -10.5 -5.35459 | opp_overlap 496062 496076 ATATATTATAAAAAA TCAGCCAAGCA GTTT TGTTTGGCTGA TTTTAACAATAAGTT SAK_0553 496565 - 496116 - | hypothetical protein TERM 638 496641 - 496653 + H 75 -2.7 -5.53991 | TACTATCTTCTCTGT TTGTT ATA AGCAA TTTTTTTGATAACTC SAK_0554 496697 - 497236 + | methyltransferase, putative TERM 639 497954 - 497968 + G 91 -10 -4.63218 | ATTGATACATTTTAA GGCTTC TGT GAAGCC TTTTGTTCCAAAGAG coaD 497535 - 498020 + | phosphopantetheine adenylyltransferase SAK_0556 498010 - 499083 + | hypothetical protein TERM 640 499430 - 499416 - g 100 -8.6 -5.08824 | GGTTTATCCAAAAAA GACTTG GAC CAAGTC TACAAAGATTCAGAT SAK_0557 499158 - 500492 + | Ser/Thr protein phosphatase family protein SAK_0558 500561 - 501139 + | hypothetical protein TERM 641 501167 - 501145 - f 72 -3.4 -5.22104 | overlap 501148 GAAAAAATAAGAAAA GGATAAACTG TAA CCGTTTATTC CACCATGAAGAAAGA SAK_0559 501190 - 502296 + | radical SAM protein SAK_0560 502296 - 502811 + | VanZ family protein SAK_0561 503007 - 504752 + | ABC transporter, ATP-binding/permease protein TERM 642 506179 - 506193 + G 80 -10 -3.54129 | opp_overlap 506179 506188 TTTTCGACTGGACAA CGCCAA CTA TTGGCG TTTGCCAGAACTGTG TERM 643 506193 - 506179 - g 78 -10 -3.32844 | opp_overlap 506179, overlap 506188 TTTTCGACTGGACAA CGCCAA CTA TTGGCG TTTGCCAGAACTGTG SAK_0562 504742 - 506481 + | ABC transporter, ATP-binding/permease protein TERM 644 506832 - 506822 - g 70 -5.4 -4.53602 | opp_overlap 506818 506816, overlap 506818 TTTATAGGAAAGAAA CCTA TTC TAGG TATCTGTTTGGGGCA SAK_0563 506609 - 507175 + | anthranilate synthase component II SAK_0564 508677 - 507187 - | ISSag8, transposase TERM 645 507235 - 507215 - G 100 -14.1 -4.99043 | opp_overlap 507219 TCTCTATAAATAAAA GACAGTACC TTA GGTACTGTC TCAGATTGAAGACAA TERM 646 507246 - 507274 + g 100 -8.9 -5.17488 | opp_overlap 507246 507252 CTGTCTCAGATTGAA GACAAACTGGAAT GTT AATCCAGCTTGTC TTTTCTTTTACTATT TERM 647 507274 - 507246 - G 80 -11.1 -3.12351 | opp_overlap 507246, overlap 507252 CTGTCTCAGATTGAA GACAAACTGGAAT GTT AATCCAGCTTGTC TTTTCTTTTACTATT TERM 648 508732 - 508759 + r 76 -7.1 -4.22678 | opp_overlap 508732 TAGACAAACAGAAAA GTCCTTAGAAA AGTGAA TGTCTAAGGAC TTTGTCTTCAATCTG TERM 649 508759 - 508732 - R 86 -7.1 -4.87328 | opp_overlap 508732 TAGACAAACAGAAAA GTCCTTAGAAA AGTGAA TGTCTAAGGAC TTTGTCTTCAATCTG TERM 650 508776 - 508796 + r 100 -14.1 -5.02357 | opp_overlap 508780, overlap 508761 TTGTCTTCAATCTGA GACAGTACC TTA GGTACTGTC TTTTATTTAGTTGTA SAK_0565 509342 - 508803 - | BioY family protein TERM 651 509179 - 509168 - G 71 -4.4 -4.78753 | CTAAGAGCAAGAAAA TAGC CACA GCTA GGAAACCCTTCCTAC bioB 510335 - 509343 - | biotin synthetase TERM 652 509456 - 509446 - G 78 -5.4 -5.03145 | TAATTTCCCAAAAAA GTTG AGT CAAC AAGTAAGGTGACTAA TERM 653 509677 - 509695 + g 73 -9.6 -2.89564 | opp_overlap 509671 509676 AGTCTGAAAGCTAAT GTGATGAG CCC CTCATCGC TCTCTCCCATACCAC TERM 654 510417 - 510376 - H 75 -2.6 -5.70829 | overlap 510377 AATAGCATAAAAAAA CTATATTGTAAACTTA GTCGATATCA TAAGTTAACAATATAA AAAATTATGATATAC SAK_0567 510460 - 510954 + | hypothetical protein TERM 655 511229 - 511242 + G 73 -2.4 -5.35354 | TGCAGTGTGCTTCAT CAAG TTCTGC CTTG TTTTTTGGTTATCTA TERM 656 512007 - 511992 - g 78 -4 -5.30339 | ATTAAAATATAAAAA TAAACC TATG GGTCTA ACTGCCATTGCAGGG SAK_0568 510964 - 512079 + | acetyl-CoA acetyltransferase family protein TERM 657 512348 - 512330 - g 76 -5.2 -4.91511 | AGTCGATTAGAAAAA GAAGTGCA GTA TGCTCCTC AACTAGCTGATTTTG TERM 658 512439 - 512451 + G 73 -6.3 -4.44608 | overlap 512436 GGTCTGATTTTTTTA GCATT CAG AATGC TTATTTTTCGGTCAC SAK_0569 512072 - 513301 + | hypothetical protein nth 513414 - 514046 + | endonuclease III SAK_0571 514436 - 514047 - | A24 family peptidase TERM 659 514098 - 514114 + g 91 -4.4 -5.85011 | opp_overlap 514098 AGCGATACTTAAAAA CGGTAG AAAAG CTATCG TTTTTTTCATTTTTC SAK_0572 514597 - 514806 + | hypothetical protein SAK_0573 514803 - 515771 + | glucokinase, putative SAK_0574 515783 - 516163 + | rhodanese-like domain-containing protein TERM 660 516200 - 516172 - f 80 -9.7 -3.40022 | opp_overlap 516171 516170 516172 516175, overlap 516175 TAAGTAATATACTAA GGAGAGAGTTACT ATT AATAACTCTCTTC ACTTTTTGTAGAAAT TERM 661 516172 - 516200 + F 74 -9.7 -2.69598 | opp_overlap 516172 516175, overlap 516171 516170 516175 TAAGTAATATACTAA GGAGAGAGTTACT ATT AATAACTCTCTTC ACTTTTTGTAGAAAT TERM 662 516175 - 516197 + F 71 -7.8 -3.49077 | opp_overlap 516175 516172, overlap 516172 516171 516170 GTAATATACTAAGGA GAGAGTTACT ATT AATAACTCTC TTCACTTTTTGTAGA TERM 663 516197 - 516175 - f 79 -10 -2.84803 | opp_overlap 516172 516171 516170 516175, overlap 516172 GTAATATACTAAGGA GAGAGTTACT ATT AATAACTCTC TTCACTTTTTGTAGA TERM 664 517344 - 517360 + G 78 -9.5 -3.57144 | TTCAAATGACTTTCT TGGTGAA TAA TTCACCA TTTGCAGGTCGCGAA typA 516395 - 518236 + | GTP-binding protein TypA SAK_0576 518281 - 518526 + | hypothetical protein TERM 665 518532 - 518558 + F 100 -9.6 -5.07652 | opp_overlap 518535 GAAGAAATAGCTTAT GAACTTAGGA TTTTGTC TCCTAAGTTC TTTTGTTTTGAGAAA TERM 666 519291 - 519308 + G 70 -2.7 -5.2189 | opp_overlap 519291 ATGGAATATCCAAAA TCAAATG TCTT CATCTGA TTTTTTGGTACTTAA murD 518656 - 520011 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 520014 - 521090 + | N-acetylglucosaminyl transferase divIB 521094 - 522230 + | cell division protein DivIB TERM 667 522264 - 522234 - f 82 -10 -3.28041 | opp_overlap 522234 522241, overlap 522241 AATGTTAATTAGCAA TAAAAAAGACTG GATTTAT CAGTCTTTTTTA TATATATCAAGTCAG TERM 668 522234 - 522264 + F 83 -10.7 -3.00022 | opp_overlap 522234 522241, overlap 522241 AATGTTAATTAGCAA TAAAAAAGACTGG ATTTA TCAGTCTTTTTTA TATATATCAAGTCAG TERM 669 522257 - 522241 - f 79 -3.7 -5.52023 | opp_overlap 522234 522241, overlap 522234 ATTAGCAATAAAAAA GACTG GATTTAT CAGTC TTTTTTATATATATC TERM 670 522241 - 522257 + F 81 -4.4 -5.4492 | opp_overlap 522241 522234, overlap 522234 ATTAGCAATAAAAAA GACTGG ATTTA TCAGTC TTTTTTATATATATC ftsA 522502 - 523875 + | cell division protein FtsA ftsZ 523897 - 525177 + | cell division protein FtsZ SAK_0582 525183 - 525857 + | hypothetical protein SAK_0583 525869 - 526474 + | hypothetical protein SAK_0584 526477 - 526731 + | YggT family protein SAK_0585 526733 - 527521 + | S4 domain-containing protein SAK_0586 527531 - 528301 + | cell division protein DivIVA, putative TERM 671 528501 - 528526 + F 87 -5.5 -5.63517 | AAGGTGGTACCACGA GCTTTCGTC CTTTATGT GATGAAAGC TTTTTTATTTAGCAA TERM 672 529804 - 529791 - g 80 -6.7 -4.72272 | CTGGCGTACGAAAAA GCCAA TCAT TTGGC GTGCGGTTCCACAAT TERM 673 529959 - 529978 + G 74 -3.6 -5.24129 | gap 1 CTCACGTCAACGTGC TTGG-GGTG TTC CACTTCCAA TTTTTTATGCAGAAG TERM 674 530168 - 530150 - g 76 -6 -4.55295 | opp_overlap 530150 530154 TCTTTGAGAAAGAAA CAGACATC ATG GATGTTTG GTTTGATTCTGGTTC TERM 675 530952 - 530936 - g 73 -7.3 -4.02022 | opp_overlap 530936 TTCAATTAGCAGAAA TGCCTGT TGC ACAGACA TTCTCTGGTCAAGAA ileS 528586 - 531378 + | isoleucyl-tRNA synthetase TERM 676 531465 - 531493 + T 72 -9 -2.73452 | opp_overlap 531470, overlap 531470 GTTTAGTAGTCATCA AAAAAGAAGCCT TGATT AGGCTTCTTTTA ATTATGCTGTTGTTG TERM 677 531488 - 531470 - T 95 -8.9 -5.1675 | opp_overlap 531465 531470 GTAGTCATCAAAAAA GAAGCCT TGATT AGGCTTC TTTTAATTATGCTGT TERM 678 531470 - 531488 + T 89 -8.9 -4.51777 | opp_overlap 531470, overlap 531465 GTAGTCATCAAAAAA GAAGCCT TGATT AGGCTTC TTTTAATTATGCTGT SAK_0588 531797 - 531495 - | hypothetical protein SAK_0589 532316 - 531861 - | NUDIX family hydrolase TERM 679 532209 - 532188 - G 70 -6.5 -4.16842 | opp_overlap 532191, overlap 532189 532192 CCCACCTGGAAGAAA CCAAGCACC ATTA GGTGCCTGT ACTAAAATAATTTTA TERM 680 532208 - 532189 - G 76 -10 -3.09784 | opp_overlap 532191, overlap 532188 532192 CCACCTGGAAGAAAC CAAGCACC ATTA GGTGCCTG TACTAAAATAATTTT TERM 681 532205 - 532192 - G 74 -8.1 -3.68738 | opp_overlap 532191, overlap 532189 532188 CCTGGAAGAAACCAA GCACC ATTA GGTGC CTGTACTAAAATAAT TERM 682 532469 - 532524 + r 76 -3.5 -5.41746 | gap 1, opp_overlap 532487, overlap 532471 532482 532487 AGGCTATTATTTTTT GAGAAGAGTGTGAAAAAAGGTTGAGT TTCTT ACTCAACCTTTTGT-ACTTTCTTCAG TTTTTTTAGAAGATT TERM 683 532471 - 532522 + r 81 -10.5 -2.89655 | gap 1, opp_overlap 532487, overlap 532469 532482 532487 GCTATTATTTTTTGA GAAGAGTGTGAAAAAAGGTTGAGT TTCTT ACTCAACCTTTTGT-ACTTTCTTC AGTTTTTTTAGAAGA TERM 684 532482 - 532512 + r 81 -9.9 -3.13376 | opp_overlap 532487, overlap 532471 532469 532487 TTGAGAAGAGTGTGA AAAAAGGTTGAGT TTCTT ACTCAACCTTTTG TACTTTCTTCAGTTT TERM 685 532507 - 532487 - R 100 -9.8 -5.04987 | opp_overlap 532482 532471 532469 532487 AAGAGTGTGAAAAAA GGTTGAGT TTCTT ACTCAACC TTTTGTACTTTCTTC TERM 686 532487 - 532507 + r 93 -9.8 -4.67256 | opp_overlap 532487, overlap 532482 532471 532469 AAGAGTGTGAAAAAA GGTTGAGT TTCTT ACTCAACC TTTTGTACTTTCTTC clpE 534763 - 532502 - | ATP-dependent Clp protease, ATP-binding subunit ClpE SAK_0591 535061 - 535291 + | hypothetical protein TERM 687 535303 - 535315 + F 100 -7.7 -6.06529 | opp_overlap 535298 535303 CTGATAATTATAAAA GACCT TGA AGGTC TTTTTTTTATATCTA TERM 688 535315 - 535303 - f 82 -7.7 -4.58466 | opp_overlap 535303, overlap 535298 CTGATAATTATAAAA GACCT TGA AGGTC TTTTTTTTATATCTA TERM 689 535503 - 535514 + G 86 -4.4 -5.76949 | TAACCATTATGATTT CAAC ATGT GTTG TTTTTTTTGGAACTA SAK_0592 535433 - 536125 + | polar amino acid ABC transporter permease SAK_0593 536118 - 536852 + | polar amino acid ABC transporter ATP-binding protein TERM 690 536860 - 536882 + F 100 -12.2 -4.91987 | TATTATAATTTCATT GTCTAAAACA ACT TGTTTTAGAC TTTTATTATTCCATT SAK_0594 537139 - 538833 + | phosphoglucomutase/phosphomannomutase family protein TERM 691 538843 - 538873 + F 71 -8.4 -3.25539 | opp_overlap 538848, overlap 538848 AAATAAGTCATATGT AAAAAGGCGATGAG GGA TTCATTGCCTTTTC TATTGATTAAAATTG TERM 692 538868 - 538848 - f 71 -5.4 -4.71061 | opp_overlap 538843 538848 AGTCATATGTAAAAA GGCGATGA GGGAT TCATTGCC TTTTCTATTGATTAA TERM 693 538848 - 538868 + F 85 -8.3 -4.73864 | opp_overlap 538848, overlap 538843 AGTCATATGTAAAAA GGCGATGAG GGA TTCATTGCC TTTTCTATTGATTAA folD 538972 - 539826 + | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase SAK_0596 539823 - 540659 + | hypothetical protein TERM 694 540672 - 540692 + F 79 -6.9 -4.61873 | opp_overlap 540672 TAAAAAATAAGTAGA GAGGTGTTA GCA TGACACTTC TTTTGCTTTATCGAG TERM 695 541805 - 541795 - g 75 -5.4 -4.73094 | opp_overlap 541795 AACAGTAAGACAAAA GCAA GGT TTGC TTCATCAAAAACTGC xseA 540785 - 542125 + | exodeoxyribonuclease VII large subunit xseB 542103 - 542318 + | exodeoxyribonuclease VII small subunit SAK_0599 542318 - 543190 + | geranyltranstransferase tlyA 543183 - 544010 + | hemolysin A SAK_0601 543997 - 544470 + | arginine repressor, putative recN 544482 - 546140 + | DNA repair protein RecN TERM 696 546446 - 546457 + G 76 -5.8 -4.58685 | opp_overlap 546437 546445 CAAAAACAAGTCAAC CACC TGTA GGTG TTTTTGCAGAAATTT TERM 697 547000 - 546988 - g 70 -3.4 -4.98522 | AACTTTAGAGAAAAA CTAG CTGTT CTAG GTGCTCCTATATCCG SAK_0603 546253 - 547089 + | DegV family protein SAK_0604 547082 - 547921 + | GDSL family lipase/acylhydrolase TERM 698 548074 - 548055 - g 78 -8 -4.27117 | GGGGTACAAGATAAA GTAAAAGT AGGT ACTTTTAC GACCAATAAGTCGCA SAK_0605 547896 - 548498 + | hypothetical protein TERM 699 548644 - 548631 - g 73 -6.7 -4.19953 | GATTTAATTGCAAAA GTAGC AGAA GCTAC AGAATTAACTAAAAA hup 548601 - 548876 + | DNA-binding protein HU TERM 700 548888 - 548928 + T 100 -6.4 -5.88197 | gap 1, opp_overlap 548891, overlap 548891 ATAATTCGTCTAGAA AAACCTTGTC-ATATCAAT GTTT ATTGATAGCGACAAGGTTC TTTTTTTATATTTGG TERM 701 548891 - 548925 + T 91 -8.1 -4.94703 | gap 1, opp_overlap 548891, overlap 548888 ATTCGTCTAGAAAAA CCTTGTC-ATATCAAT GTTT ATTGATAGCGACAAGG TTCTTTTTTTATATT TERM 702 548925 - 548891 - T 100 -10.3 -4.83169 | gap 1, opp_overlap 548888 548891 ATTCGTCTAGAAAAA CCTTGTCA-TATCAAT GTTT ATTGATAGCGACAAGG TTCTTTTTTTATATT SAK_0607 550106 - 548964 - | prophage LambdaSa03, site-specific recombinase phage integrase family protein TERM 703 549212 - 549228 + g 72 -9.5 -2.59191 | overlap 549211 549214 AAGAATTTATTTGGA TAGGAAC ACC GTTCCTA GTTGTGAAGATGTAG TERM 704 550184 - 550220 + r 100 -8.8 -6.01187 | gap 1 TACTATACTAGATTC GCCTCACGCTCGCAC CGACCAAA GT-TGAGCGTGGGGC TTTTTTTGTTTCATT SAK_0608 550443 - 550234 - | hypothetical protein SAK_0609 550875 - 550495 - | hypothetical protein SAK_0610 551221 - 550862 - | prophage LambdaSa03, Cro/CI family transcriptional regulator SAK_0611 551413 - 551631 + | prophage LambdaSa03, Cro/CI family transcriptional regulator TERM 705 551882 - 551866 - g 93 -6.6 -5.4492 | opp_overlap 551865 551866 TAGAGATAGAAAAAA TGGTGT ATGTG ACACCA ATTATGACTATACTC SAK_0612 551729 - 552061 + | hypothetical protein TERM 706 552139 - 552114 - T 100 -9.9 -5.64421 | AGCGGAAATAAAAAA GAATCTATTGC GGTA ACAATAGATTC CAAAACGCTAGCCGA SAK_0613 552501 - 552166 - | hypothetical protein TERM 707 552468 - 552480 + g 76 -7.7 -4.01315 | opp_overlap 552468 TCAACATATACATCA GACCT AGA AGGTC TTGTTTAACATTTTT TERM 708 552861 - 552844 - H 90 -4.1 -5.97979 | overlap 552845 ATAACAACAAAAAAA CCACTGC GGGA ACAGTGA CTTACGAAAATATCT SAK_0614 553227 - 553376 + | hypothetical protein SAK_0615 553649 - 553939 + | hypothetical protein SAK_0616 553926 - 554609 + | hypothetical protein SAK_0617 554684 - 556048 + | prophage LambdaSa03, helicase, putative SAK_0618 556053 - 556535 + | hypothetical protein TERM 709 557207 - 557181 - g 73 -5.9 -4.5265 | overlap 557183 AAGTAGACTACAAAA CAGCAATAAAC AGTAA GTCTATTGCAG AAAAATATCTTGAGT TERM 710 557205 - 557183 - g 71 -7.1 -3.8637 | overlap 557181 GTAGACTACAAAACA GCAATAAAC AGTAA GTCTATTGC AGAAAAATATCTTGA SAK_0619 556553 - 558106 + | bacteriophage resistance protein SAK_0620 558375 - 559244 + | hypothetical protein SAK_0621 559264 - 559545 + | hypothetical protein TERM 711 559665 - 559649 - g 74 -9.5 -3.0122 | overlap 559657 AAATAAACGCAGAGA GTATGCA AGC TGCATAC AACGAAAATTATCAA SAK_0622 559624 - 559920 + | hypothetical protein SAK_0623 560174 - 560338 + | hypothetical protein SAK_0624 560608 - 560751 + | hypothetical protein SAK_0625 560748 - 561260 + | hypothetical protein SAK_0626 561281 - 561580 + | hypothetical protein SAK_0627 561768 - 561962 + | hypothetical protein SAK_0628 561959 - 562225 + | hypothetical protein TERM 712 562570 - 562551 - f 81 -4.2 -5.68489 | GAGAACAATAAAAAA GCCAGCTC ACGT AAGCCAGC TCCAATATATTTGTC SAK_0629 562613 - 563041 + | hypothetical protein TERM 713 563599 - 563617 + F 88 -7.4 -5.10208 | ACTCAATATGCACTA GTCATCAC ACC GTGGTGGC TTTTTATTACAATTG TERM 714 563686 - 563670 - g 73 -2.1 -5.36441 | overlap 563671 563672 CGTGCAGATAAAAAA GGTACCC ACC GGGTCGC GTTCGAAAAAAATAA TERM 715 563749 - 563703 - g 79 -5.1 -5.20328 | gap 1, opp_overlap 563719, overlap 563704 TTCGAAAAAAATAAA CGCCGGCTACTAAAAACCGC CCACCTAT GCGGTATCT-GTGGCCGGCC AGTAGATAAGTCATT TERM 716 563748 - 563704 - g 78 -8.6 -3.7057 | gap 1, opp_overlap 563719, overlap 563703 TCGAAAAAAATAAAC GCCGGCTACTAAAAACCGC CCACCTAT GCGGTATCT-GTGGCCGGC CAGTAGATAAGTCAT SAK_0630 563613 - 563987 + | prophage LambdaSa03, HNH endonuclease family protein SAK_0631 564138 - 564494 + | hypothetical protein TERM 717 564508 - 564533 + G 88 -8.3 -4.60487 | GAATTATATGGGTAT GGGCTATCTTC GTAG GAAGTTAGCTC TTTTTAAGACTGGTG SAK_0632 564491 - 565759 + | hypothetical protein SAK_0633 565752 - 566972 + | hypothetical protein TERM 718 567137 - 567123 - g 75 -7.2 -4.18367 | overlap 567117 GAGGATATACAGAAA TTTCTG AAT CAGAAA TCAAATCAATTGAAA SAK_0634 566972 - 567160 + | hypothetical protein TERM 719 567164 - 567187 + F 75 -2.4 -5.67063 | gap 1 GAAATCATTTAATAA GCGCTTAGCTA GTG TTGC-AAGTGC TTTTTTTATGCTCGA TERM 720 567626 - 567607 - g 90 -3.6 -5.85011 | opp_overlap 567607 567609 GAAAAAGTAAAAAAA TATCTTGA AATG TCAGGATA TGTTGACGGAGAAGA TERM 721 568005 - 567989 - g 71 -5.1 -4.69664 | TACATGACGTAAAAA GTTGGTA TGT TGCCAAC CCGTCAATGGGATAT SAK_0635 567268 - 568683 + | prophage LambdaSa03, terminase, large subunit, putative TERM 722 568691 - 568704 + F 83 -4.5 -5.55664 | opp_overlap 568691 568701 GCTGTTAAAAAACGA CATCC GAAA GGGTG TTTTTTTACTGCTAA SAK_0636 568764 - 569228 + | hypothetical protein SAK_0637 569231 - 570133 + | prophage LambdaSa03, structural protein, putative SAK_0638 570130 - 570345 + | hypothetical protein SAK_0639 570359 - 570790 + | hypothetical protein SAK_0640 570741 - 571079 + | hypothetical protein TERM 723 571293 - 571281 - f 84 -6.3 -5.20154 | AGATAACTCAAAAAA CAACA CAT TGTTG AAGGCGGTGCGATGA TERM 724 571339 - 571361 + G 86 -5.6 -5.42259 | gap 1, opp_overlap 571344 ATCAAAAAATATTTA GACGAGCAC TTAGAT GTGC-CGTC TTTTTTTGAACATCA TERM 725 571401 - 571381 - g 78 -6.2 -4.87626 | TTTGAACATCAAAAA GATGAACC TGCAC GATTCATC ATCTTAGAAAAGACT SAK_0641 571309 - 571644 + | hypothetical protein SAK_0642 571654 - 572211 + | prophage LambdaSa03, structural protein, putative SAK_0643 572211 - 572456 + | hypothetical protein TERM 726 572540 - 572564 + G 81 -2.9 -5.64421 | opp_overlap 572540 ATATATGATTACAAA CAGCTAC CACCTCTAAAA GTAGCTG TTTTTTCTTTAGGCT SAK_0644 572471 - 572842 + | hypothetical protein TERM 727 573789 - 573810 + G 90 -8.8 -4.49364 | AACAAGCGGTCCGTC GCTAATGC AAGCTG GCATTAGC TTTATTATTAGCTTT SAK_0645 572842 - 574854 + | prophage LambdaSa03, pblA protein, internal deletion TERM 728 575154 - 575127 - g 77 -10.7 -2.91383 | gap 1, opp_overlap 575120 575127 ATGTTTAGCCACATA CCTGGAC-GCTA TTATT TAGCTGTCCAGG TTGGTGATTTGAACT TERM 729 575127 - 575154 + G 80 -10.7 -3.33037 | gap 1, opp_overlap 575127, overlap 575120 ATGTTTAGCCACATA CCTGGAC-GCTA TTATT TAGCTGTCCAGG TTGGTGATTTGAACT TERM 730 575422 - 575448 + G 80 -6 -4.90266 | gap 1, opp_overlap 575421 CTGAAGAAGAAGACG GGACTATCGTT CATCGT AACGA-AGTCC TTTTTGATTACTCAA SAK_0646 574848 - 576380 + | prophage LambdaSa03, tail component, putative TERM 731 576396 - 576417 + G 84 -4.3 -5.48825 | ATGTTAACAATTCAT GGACCGGAT TTAA AACCTGTCC TTTTTTTGGATAATG TERM 732 577092 - 577073 - g 73 -8.6 -3.39327 | GCGCCAGATTTATAA TGCCATAC GCCC GTACGGCA AAAAAAATGTTAAAG TERM 733 578079 - 578093 + G 73 -7.2 -4.1552 | AAGACCAGAGTTACT GTTTTG GAG CAAAAC TTTGTTGGCCGCATG TERM 734 579246 - 579229 - g 73 -7.1 -4.14874 | opp_overlap 579229 ATAATACTGGCAAAA CATACAT AGGT ATGTATG TTGATGATAATATCA TERM 735 579691 - 579703 + G 73 -6.3 -4.38129 | opp_overlap 579690 579701, overlap 579701 TCATGGTCGAGCAAG GTGTA ACG TACAC TTTTAGTGCTTATGT TERM 736 580421 - 580436 + G 84 -4.7 -5.27335 | TGTTTTCACTTTGCG GCTTC GTATTG GAAGC TTTTTGTTTGAAGAA SAK_0647 576381 - 580502 + | prophage LambdaSa03, minor structural protein, putative SAK_0648 580503 - 582506 + | prophage LambdaSa03, minor structural protein, putative SAK_0649 582518 - 582910 + | hypothetical protein SAK_0650 582933 - 583061 + | hypothetical protein SAK_0651 583070 - 583372 + | hypothetical protein TERM 737 583406 - 583394 - g 73 -6.3 -4.49311 | ATTACGACTACAAAA CAAAG TAA CTTTG ATGGCTATTTTAGGA SAK_0652 583365 - 583592 + | prophage LambdaSa03, holin TERM 738 583661 - 583671 + F 77 -3.2 -5.68023 | opp_overlap 583655, overlap 583655 CTGTACATACCGCTT GCAG TGG TTGC TTTTTTTAGTTATCC TERM 739 584995 - 584971 - g 78 -9.4 -3.47218 | TTATGAAAAAGTGAA TGGATGGTCA CGCAT TAACCATCCA GAGTCGGCGCAATGG SAK_0653 583718 - 585049 + | prophage LambdaSa03, peptidoglycan endolysin TERM 740 585077 - 585057 - T 72 -4.7 -4.89966 | ATATGTAAAAATAAA CGAAAGGAA AAG CTCCTTTAG ATAAGACAAATGCCC TERM 741 585108 - 585088 - T 83 -8.1 -4.31164 | opp_overlap 585089, overlap 585089 TTTAGATAAGACAAA TGCCCTCGC TTT GCGGGGGCT TTTTATTATTTTGAA TERM 742 585107 - 585089 - T 88 -11.6 -3.17975 | opp_overlap 585089, overlap 585088 TTAGATAAGACAAAT GCCCTCGC TTT GCGGGGGC TTTTTATTATTTTGA TERM 743 585089 - 585107 + T 100 -13.8 -5.4593 | opp_overlap 585088 585089 TTAGATAAGACAAAT GCCCTCGC TTT GCGGGGGC TTTTTATTATTTTGA TERM 744 585246 - 585232 - T 73 -4.4 -5.00642 | opp_overlap 585222, overlap 585221 TAAGCTATATAAAAA TATATA ATG TATATA TAAATATCAATGGCC SAK_0654 585514 - 585311 - | hypothetical protein SAK_0655 585900 - 586079 + | hypothetical protein TERM 745 586300 - 586340 + F 88 -6.4 -5.37043 | gap 1, opp_overlap 586303, overlap 586303 ATAATTCGTCTAGAA AAACCTTGTC-ATATCAAT GTTT ATTGATAGCGACAAGGTTC TTTTTTATATCCAAT TERM 746 586337 - 586303 - f 100 -10.3 -4.83169 | gap 1, opp_overlap 586303 586300 ATTCGTCTAGAAAAA CCTTGTCA-TATCAAT GTTT ATTGATAGCGACAAGG TTCTTTTTTATATCC TERM 747 586303 - 586337 + F 90 -8.1 -4.77122 | gap 1, opp_overlap 586303, overlap 586300 ATTCGTCTAGAAAAA CCTTGTC-ATATCAAT GTTT ATTGATAGCGACAAGG TTCTTTTTTATATCC SAK_0656 586485 - 586682 + | hypothetical protein TERM 748 586721 - 586689 - T 100 -13.7 -3.67622 | opp_overlap 586689 586691 586696, overlap 586691 586696 GATTGGTAAAATCAA TATAAAAGAGCAAAC AAG GTTTGCTCTTTTATT ATTTTTAAAGGTAAT TERM 749 586689 - 586722 + T 100 -12.1 -4.60889 | gap 1, opp_overlap 586689 586691 586696, overlap 586691 586696 GATTGGTAAAATCAA T-ATAAAAGAGCAAAC AAG GTTTGCTCTTTTATTA TTTTTAAAGGTAATT TERM 750 586719 - 586691 - T 100 -16.3 -3.41359 | opp_overlap 586691 586689 586696, overlap 586689 586696 TTGGTAAAATCAATA TAAAAGAGCAAAC AAG GTTTGCTCTTTTA TTATTTTTAAAGGTA TERM 751 586691 - 586719 + T 100 -16.3 -4.41633 | opp_overlap 586689 586691 586696, overlap 586689 586696 TTGGTAAAATCAATA TAAAAGAGCAAAC AAG GTTTGCTCTTTTA TTATTTTTAAAGGTA TERM 752 586714 - 586696 - T 100 -11.8 -4.77629 | opp_overlap 586696 586691 586689, overlap 586691 586689 AAAATCAATATAAAA GAGCAAAC AAG GTTTGCTC TTTTATTATTTTTAA TERM 753 586696 - 586714 + T 100 -11.8 -5.16681 | opp_overlap 586691 586689 586696, overlap 586691 586689 AAAATCAATATAAAA GAGCAAAC AAG GTTTGCTC TTTTATTATTTTTAA pyrD 587658 - 586726 - | dihydroorotate dehydrogenase 1A TERM 754 587783 - 587758 - R 70 -7.1 -3.61652 | overlap 587760 TCGCTAAATAACGAA CATTATTGTTT GTAT AAACAATAATA GTAAAGAAATAAATG TERM 755 587781 - 587760 - R 71 -7.5 -3.38135 | overlap 587758 GCTAAATAACGAACA TTATTGTTT GTAT AAACAATAA TAGTAAAGAAATAAA TERM 756 587851 - 587812 - R 78 -9.6 -3.29144 | opp_overlap 587823, overlap 587813 587823 TGATGCTTTCTATAA TGCATAAAAAATAAGCTT ATGT AAGCTTATTTTTTATGTT CGGCGTAAGATTTTC TERM 757 587850 - 587813 - R 100 -13.1 -2.57344 | opp_overlap 587823, overlap 587812 587823 GATGCTTTCTATAAT GCATAAAAAATAAGCTT ATGT AAGCTTATTTTTTATGT TCGGCGTAAGATTTT TERM 758 587840 - 587823 - R 100 -7.1 -5.3236 | opp_overlap 587823, overlap 587813 587812 ATAATGCATAAAAAA TAAGCTT ATGT AAGCTTA TTTTTTATGTTCGGC TERM 759 587823 - 587840 + r 100 -7.1 -5.47159 | opp_overlap 587813 587812 587823 ATAATGCATAAAAAA TAAGCTT ATGT AAGCTTA TTTTTTATGTTCGGC fibB 589080 - 587845 - | beta-lactam resistance factor SAK_0659 590310 - 589099 - | FemAB family protein TERM 760 590046 - 590059 + g 70 -8.1 -3.37053 | opp_overlap 590040 TGCCAAAAGCTTTAA GGTCC TTAA GGACC TTAGTTACAATATCT TERM 761 590201 - 590188 - G 70 -3.1 -5.03314 | opp_overlap 590199 TTCACCGTCAAAAAA GCCAA GTAA TTGAC TACCCCAGTTGTCTT SAK_0660 591543 - 590323 - | FemAB family protein TERM 762 590988 - 591000 + g 82 -7.7 -4.39002 | overlap 590986 AAATTTGAACACCGC GATGC TTT GCATC TTTTATCAGACGTTT SAK_0661 592355 - 591543 - | Cof-like hydrolase TERM 763 591890 - 591904 + g 76 -5.8 -4.62441 | opp_overlap 591890 CAGGTTGATCAATCA TCATTA GTT TAATGA TTTCTTTGTCTCCCA SAK_0662 593742 - 592426 - | HD domain-containing protein TERM 764 593667 - 593692 + g 93 -12.1 -3.67792 | opp_overlap 593674, overlap 593670 GAAATTCTTTAGTGT TAATCAAGTCA TATA TGACTTGATTA TTTACATGGATATAA TERM 765 593670 - 593689 + g 83 -9.4 -3.9693 | opp_overlap 593674, overlap 593667 ATTCTTTAGTGTTAA TCAAGTCA TATA TGACTTGA TTATTTACATGGATA SAK_0663 593818 - 594204 + | hypothetical protein TERM 766 594485 - 594512 + F 100 -12.2 -5.38054 | opp_overlap 594484 594483 GTTGTCTTAAACAGC GAGACTTGTTTT CATA AAAACAGGTCTC TTTTTGTTTGTGGAG TERM 767 594589 - 594569 - g 77 -2.5 -5.57729 | overlap 594570 AAAGAACAGAAAAAA TCCTTGTTT TAC ACACAAGGT CAAGAAGAGGTTCTA SAK_0664 594548 - 597232 + | calcium-transporting ATPase TERM 768 597272 - 597250 - f 100 -13.6 -5.626 | opp_overlap 597250 TAGCTGATAAAAAAA CTCACTTAGA ATA TCTAAGTGAG TTTTTTAGCAATCAA TERM 769 597250 - 597272 + F 100 -13.6 -5.03314 | opp_overlap 597250 TAGCTGATAAAAAAA CTCACTTAGA ATA TCTAAGTGAG TTTTTTAGCAATCAA TERM 770 598332 - 598322 - g 78 -4 -5.27335 | overlap 598324 CTCTTGAAAGAAAAA TTTC CTC GAAA AGAAGATATCGTAAC TERM 771 599645 - 599628 - g 74 -9.9 -2.70017 | opp_overlap 599601, overlap 599627 599625 TTGAAAGTCAAATAC GTCTAGC ATAT GCTAGAC CAGAGAAACATGATG fbp 598289 - 600220 + | fructose-1,6-bisphosphatase SAK_0667 600310 - 601434 + | iron-sulfur cluster-binding protein, putative TERM 772 601908 - 601889 - g 71 -7.2 -3.89524 | gap 1, overlap 601893 ATGCTATCTTAGAAA TCCATCCTG GTT CAGGA-GGA ACTGAAGCGCAAGAT prfB 601503 - 602601 + | peptide chain release factor 2 ftsE 602620 - 603312 + | cell division ATP binding protein FtsE SAK_0670 603296 - 604225 + | cell division protein FtsX, putative TERM 773 604253 - 604232 - T 100 -10.3 -5.12971 | opp_overlap 604236 AAGATTTAATAAAAA GAGATGAAA TCTA TTTCATCTC TCAGATTGAAGACAA TERM 774 604292 - 604264 - T 84 -11.1 -3.1247 | opp_overlap 604264, overlap 604270 ATCTCTCAGATTGAA GACAAACTGGAAT GTT AATCCAGCTTGTC TTTTCTTTTACTATT TERM 775 604264 - 604292 + T 95 -8.9 -5.17488 | opp_overlap 604264 604270 ATCTCTCAGATTGAA GACAAACTGGAAT GTT AATCCAGCTTGTC TTTTCTTTTACTATT SAK_0671 605695 - 604247 - | ISSag8, transposase TERM 776 605750 - 605777 + r 76 -7.1 -4.22678 | opp_overlap 605750 TAGACAAACAGAAAA GTCCTTAGAAA AGTGAA TGTCTAAGGAC TTTGTCTTCAATCTG TERM 777 605777 - 605750 - R 86 -7.1 -4.87328 | opp_overlap 605750 TAGACAAACAGAAAA GTCCTTAGAAA AGTGAA TGTCTAAGGAC TTTGTCTTCAATCTG TERM 778 605794 - 605815 + r 100 -10.3 -5.2204 | opp_overlap 605798, overlap 605784 TTGTCTTCAATCTGA GAGATGAAA TCTA TTTCATCTC TTTTTATTAATTGTA SAK_0672 606550 - 605840 - | hypothetical protein SAK_0673 607245 - 606547 - | metallo-beta-lactamase family protein SAK_0674 607413 - 608177 + | acetoin reductase TERM 779 608194 - 608216 + F 100 -15 -5.61913 | opp_overlap 608188 608196 AATGATTAATGCTAA CACTGTGAGT TTC ACTCACAGTG TTTTTTATATTTCTT TERM 780 608214 - 608196 - f 89 -11.8 -3.10464 | opp_overlap 608194, overlap 608188 TGATTAATGCTAACA CTGTGAGT TTC ACTCACAG TGTTTTTTATATTTC SAK_0675 608290 - 610797 + | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon SAK_0676 610883 - 612076 + | aspartate aminotransferase asnC 612097 - 613443 + | asparaginyl-tRNA synthetase TERM 781 613436 - 613481 + T 100 -15.1 -3.64162 | opp_overlap 613438 613451, overlap 613438 613451 TGTTACATCGTATCA AACCATAATAAAAAAGCGC TAGCTAGT GCGCTTTTTTATTATGGTC TTTAGAATCGTTGGT TERM 782 613479 - 613438 - T 100 -17.7 -3.75665 | opp_overlap 613438 613436 613451, overlap 613451 TTACATCGTATCAAA CCATAATAAAAAAGCGC TAGCTAGT GCGCTTTTTTATTATGG TCTTTAGAATCGTTG TERM 783 613438 - 613479 + T 100 -17.7 -3.39732 | opp_overlap 613438 613451, overlap 613436 613451 TTACATCGTATCAAA CCATAATAAAAAAGCGC TAGCTAGT GCGCTTTTTTATTATGG TCTTTAGAATCGTTG TERM 784 613451 - 613466 + T 77 -3.2 -5.58179 | opp_overlap 613438 613451, overlap 613438 613436 AACCATAATAAAAAA GCGC TAGCTAGT GCGC TTTTTTATTATGGTC TERM 785 613466 - 613451 - T 77 -3.2 -5.59534 | opp_overlap 613451 613438 613436, overlap 613438 AACCATAATAAAAAA GCGC TAGCTAGT GCGC TTTTTTATTATGGTC SAK_0678 614040 - 613483 - | hypothetical protein TERM 786 613978 - 613960 - G 76 -6 -4.60041 | overlap 613962 613973 AGGTAGGCGTAAAAA TAGAGCTA AAT TAGCCCCA ACAAGGTTGATGGCG SAK_0679 615020 - 614037 - | inosine-uridine preferring nucleoside hydrolase family protein TERM 787 615119 - 615098 - R 100 -9.5 -5.46657 | CATGGCAATAAAAAA GATCTTGGC AGTT ACCAAGATC ACACGAAAAAATGAA TERM 788 615152 - 615131 - R 95 -8.9 -5.23316 | opp_overlap 615130 615135 GATCACACGAAAAAA TGAATTTAG TTTT CTAAATTCA ATCATATTTTCAGTC SAK_0680 615679 - 615266 - | organic hydroperoxide resistance protein, putative SAK_0681 615833 - 616723 + | hypothetical protein TERM 789 617641 - 617626 - g 73 -3.2 -5.09245 | overlap 617628 TTAAAATTAGAAAAA GGTGGA GCCT TCCATC ATGGTGACTTCGTTG SAK_0682 616918 - 617694 + | hypothetical protein TERM 790 618333 - 618319 - g 71 -8.6 -3.17875 | opp_overlap 618318 AAGAGATTAAAATGA TACGTG AGA CACGTA ATGATATTAATCGTG SAK_0683 617691 - 618602 + | hypothetical protein TERM 791 618898 - 618880 - g 71 -4.6 -4.89233 | TATTAACAGTAAAAA TGTAGC GATGAGT GCTACA GAAACTATTACAACG pepDA 618617 - 620014 + | dipeptidase A TERM 792 620019 - 620036 + F 89 -7.7 -5.0538 | opp_overlap 620019 620021 TGGGAGATTAAAAAA CTCGGAA TATT TTCCGGG TTTTTTAAGATAAAA TERM 793 620036 - 620019 - f 80 -5.5 -5.21709 | opp_overlap 620019, overlap 620021 TGGGAGATTAAAAAA CTCGGAA TATT TTCCGGG TTTTTTAAGATAAAA TERM 794 620704 - 620686 - g 70 -2.5 -5.10461 | gap 1, opp_overlap 620666, overlap 620666 TTCATTTAACAAAAA TGCAGATG CTTA CAT-TGCA AAATTAAAAGAGCTT adcA 620156 - 621676 + | zinc ABC transporter, zinc-binding protein AdcA TERM 795 621709 - 621686 - T 100 -12.6 -4.29325 | opp_overlap 621686 CATTAATATTTAAAA GATGATATCG GATA CGATATCATC TTTTTTTCTTTGTAC TERM 796 621686 - 621709 + T 100 -12.6 -6.02919 | opp_overlap 621686 CATTAATATTTAAAA GATGATATCG GATA CGATATCATC TTTTTTTCTTTGTAC TERM 797 621768 - 621750 - T 100 -11.8 -5.51046 | opp_overlap 621750 CAAACATAGAAAAAA GCACTTCT AAT AGAAGTGC TTTTAAAATTAATGC TERM 798 621750 - 621768 + T 100 -11.8 -4.20696 | opp_overlap 621750 CAAACATAGAAAAAA GCACTTCT AAT AGAAGTGC TTTTAAAATTAATGC rpmE2 622049 - 621789 - | 50S ribosomal protein L31 type B SAK_0687 623093 - 622158 - | DHH family protein add 623359 - 624381 + | adenosine deaminase SAK_0689 624440 - 624883 + | flavodoxin SAK_0690 624960 - 625235 + | hypothetical protein SAK_0691 625228 - 626424 + | voltage-gated chloride channel family protein TERM 799 626459 - 626480 + F 100 -7.3 -5.64304 | opp_overlap 626464, overlap 626461 GAGTTTATCAGTTTG TAGAACGGA ATAT TCCGTTCTC TTTTTTATTCTCTTA TERM 800 626461 - 626478 + F 93 -9.9 -4.42868 | opp_overlap 626464, overlap 626459 GTTTATCAGTTTGTA GAACGGA ATAT TCCGTTC TCTTTTTTATTCTCT TERM 801 627020 - 627005 - g 70 -2.6 -5.24416 | overlap 627018 GAAGGAGAATAAAAA TGAATC CATT AATTCA AAGTTTGACAGAAGG rplS 627004 - 627351 + | 50S ribosomal protein L19 TERM 802 627459 - 627426 - f 78 -9.7 -3.29593 | opp_overlap 627436 627458, overlap 627427 627435 627436 ACTGGACAACCAAGA CGTAAAAAATCTGCC TGTG GGCAGTTTTTTTACT AGGTCCCCTTAGTTC TERM 803 627458 - 627427 - f 100 -13.2 -2.57274 | opp_overlap 627436, overlap 627426 627435 627436 CTGGACAACCAAGAC GTAAAAAATCTGCC TGTG GGCAGTTTTTTTAC TAGGTCCCCTTAGTT TERM 804 627450 - 627435 - f 77 -4.6 -5.1615 | opp_overlap 627436, overlap 627427 627426 627436 CCAAGACGTAAAAAA TCTGCC TGTG GGCAGT TTTTTTACTAGGTCC TERM 805 627449 - 627436 - f 75 -8.1 -3.68606 | opp_overlap 627436, overlap 627435 627427 627426 CAAGACGTAAAAAAT CTGCC TGTG GGCAG TTTTTTTACTAGGTC TERM 806 627436 - 627449 + F 100 -8.1 -5.53991 | opp_overlap 627436 627435 627427 627426 CAAGACGTAAAAAAT CTGCC TGTG GGCAG TTTTTTTACTAGGTC SAK_0695 628380 - 628784 + | hypothetical protein TERM 807 629763 - 629719 - T 88 -8.8 -4.45544 | opp_overlap 629727, overlap 629724 CGTTATCAATCAAAA TTAAACAACCTGACTCCT CTAGAATTC AGGAATCAGGTTGCATAA CTTATCTTTTATTAT TERM 808 629758 - 629724 - T 100 -10.9 -4.27062 | opp_overlap 629727, overlap 629719 TCAATCAAAATTAAA CAACCTGACTCCT CTAGAATTC AGGAATCAGGTTG CATAACTTATCTTTT TERM 809 629887 - 629924 + T 84 -5.5 -5.38326 | TTCTTATACTGTCTT GCCTCACGCTCTCCT CGACCAAA AATTGAGCGTGAGGC TTTTTGTTTCATTAA SAK_0697 630097 - 629936 - | hypothetical protein SAK_0698 630839 - 632116 + | ABC transporter, permease protein SAK_0699 632126 - 632782 + | ABC transporter, ATP-binding protein TERM 810 633317 - 633303 - g 70 -2.8 -5.09685 | GGCAAAAAAAAACAA TCTCAA AGT TGGAGA TAAAATAAAAATAAA SAK_0700 632782 - 634158 + | ABC transporter, permease protein Vexp3 TERM 811 634161 - 634186 + F 88 -6.9 -5.1925 | opp_overlap 634161 634162 634163, overlap 634163 TGATAATAATTAAAA TTTTCGGTGAT TTAT ATCACCGAATG TTTTTTGACTTATAA TERM 812 634185 - 634162 - f 71 -8.2 -3.34564 | opp_overlap 634161 634163, overlap 634161 634163 GATAATAATTAAAAT TTTCGGTGAT TTAT ATCACCGAAT GTTTTTTGACTTATA TERM 813 634184 - 634163 - f 87 -11.7 -2.59654 | opp_overlap 634163 634161, overlap 634162 634161 ATAATAATTAAAATT TTCGGTGAT TTAT ATCACCGAA TGTTTTTTGACTTAT TERM 814 634163 - 634184 + F 100 -11.7 -4.21792 | opp_overlap 634162 634161 634163, overlap 634161 ATAATAATTAAAATT TTCGGTGAT TTAT ATCACCGAA TGTTTTTTGACTTAT vncR 634255 - 634908 + | DNA-binding response regulator VncR TERM 815 636141 - 636125 - g 70 -6.7 -4.09503 | opp_overlap 636127 AAATATAGTAAAGAA TATACTT AAT AAGTATA ATATAAAGTATGAAA SAK_0702 634905 - 636206 + | sensor histidine kinase VncS, putative SAK_0703 636845 - 636258 - | IS5 family transposase orfB TERM 816 637020 - 636992 - H 100 -13.9 -4.38129 | opp_overlap 636992 AGATAATCACTAAAA CAAGAGTCGCCTG ACA CTAGCGACTCTTG TTTTTATTTGCTAAA TERM 817 636992 - 637020 + H 100 -11.7 -5.33405 | opp_overlap 636992 AGATAATCACTAAAA CAAGAGTCGCCTG ACA CTAGCGACTCTTG TTTTTATTTGCTAAA SAK_0704 637083 - 637262 + | CsbD family protein TERM 818 637305 - 637254 - f 95 -8.99999 -5.27335 | gap 1, opp_overlap 637259 637260 637263, overlap 637259 637263 637267 GCTGTCAAAGAAAAA CTGAAG-TAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTATCTTTTT GTCTATCAGAACAGA TERM 819 637299 - 637259 - f 100 -17.9 -3.54768 | opp_overlap 637259 637260 637263, overlap 637254 637263 637267 CAAAGAAAAACTGAA GTAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTAT CTTTTTGTCTATCAG TERM 820 637259 - 637300 + F 100 -15.5 -5.03994 | gap 1, opp_overlap 637259 637254 637263 637267, overlap 637260 637263 CAAAGAAAAACTGAA G-TAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTATC TTTTTGTCTATCAGA TERM 821 637260 - 637298 + F 100 -19.2 -4.14422 | opp_overlap 637259 637254 637263 637267, overlap 637259 637263 AAAGAAAAACTGAAG TAACAAATAACCGCTCAT TTA ACGAGCGGTTATTTGTTA TCTTTTTGTCTATCA TERM 822 637263 - 637295 + F 100 -16.5 -4.16226 | opp_overlap 637259 637254 637263 637267, overlap 637260 637259 GAAAAACTGAAGTAA CAAATAACCGCTCAT TTA ACGAGCGGTTATTTG TTATCTTTTTGTCTA TERM 823 637295 - 637263 - f 100 -18.7 -3.47011 | opp_overlap 637263 637260 637259, overlap 637259 637254 637267 GAAAAACTGAAGTAA CAAATAACCGCTCAT TTA ACGAGCGGTTATTTG TTATCTTTTTGTCTA TERM 824 637291 - 637267 - f 100 -13.7 -4.34223 | opp_overlap 637263 637260 637259, overlap 637263 637259 637254 AACTGAAGTAACAAA TAACCGCTCAT TTA ACGAGCGGTTA TTTGTTATCTTTTTG SAK_0705 637304 - 637492 + | hypothetical protein TERM 825 637725 - 637690 - f 100 -10.8 -4.37886 | opp_overlap 637693 637698 637722 637723, overlap 637693 637698 CTAGTGTTGAGAAAA TAACAAAACTTAAATA AGAT TATTTAAGTTTTGTTT AAGGTGAACTTTGTA TERM 826 637722 - 637693 - f 100 -12.5 -4.30995 | opp_overlap 637693 637698, overlap 637690 637698 GTGTTGAGAAAATAA CAAAACTTAAATA AGAT TATTTAAGTTTTG TTTAAGGTGAACTTT TERM 827 637693 - 637722 + F 95 -12.5 -3.61371 | opp_overlap 637690 637693 637698, overlap 637698 GTGTTGAGAAAATAA CAAAACTTAAATA AGAT TATTTAAGTTTTG TTTAAGGTGAACTTT TERM 828 637698 - 637717 + F 83 -6.6 -4.88918 | opp_overlap 637698 637693 637690, overlap 637693 GAGAAAATAACAAAA CTTAAATA AGAT TATTTAAG TTTTGTTTAAGGTGA TERM 829 637717 - 637698 - f 88 -6.6 -5.12916 | opp_overlap 637693 637698, overlap 637693 637690 GAGAAAATAACAAAA CTTAAATA AGAT TATTTAAG TTTTGTTTAAGGTGA TERM 830 637815 - 637840 + F 100 -9.1 -5.4505 | opp_overlap 637813 CAATCTCCTAATATT TGCAACTCATA ATGA TTTGAGTTGCA TTTTTTATTGCAAAA SAK_0706 637917 - 639122 + | cell cycle protein FtsW TERM 831 639151 - 639131 - f 82 -2.5 -5.9218 | opp_overlap 639131 TATATAACAAAAAAA GGTTGGA AAGATAA TCCAGCC TTTTAATAATCGAAA TERM 832 639691 - 639679 - g 74 -2.7 -5.28942 | TATTTGAAAGAAAAA TACCA AAT TGATA ATTGTTTAGTAATAG SAK_0707 639241 - 639801 + | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein TERM 833 640096 - 640085 - g 91 -5.8 -5.49234 | ATATCCAAGAAAAAA CTGG AAGA CCAG CTGTAGAGACAGTTT TERM 834 640997 - 640975 - g 93 -12 -3.64822 | ATTTTGGCATCTAAA GCCCGTATTG CAG CAAAACGGGC GCGTGAAGTAACACG gyrB 639802 - 641754 + | DNA gyrase subunit B ezrA 641848 - 643572 + | septation ring formation regulator EzrA TERM 835 643577 - 643594 + F 100 -8.5 -5.65513 | opp_overlap 643577 TTCGTTTCTAAAAAA GAAGAGT TAGT ACTCTTC TTTTTTTAATTGCTA TERM 836 643594 - 643577 - f 95 -8.5 -5.00616 | opp_overlap 643577 TTCGTTTCTAAAAAA GAAGAGT TAGT ACTCTTC TTTTTTTAATTGCTA serB 643666 - 644307 + | phosphoserine phosphatase SerB TERM 837 644330 - 644298 - T 77 -8.6 -3.67296 | opp_overlap 644304, overlap 644304 TATTATTGATGCAAA TGAAAACTAGGCCT TTATT AAGCCTAGTTTTTA GATTAAGGATTTTAA TERM 838 644304 - 644324 + T 74 -5.4 -4.74103 | opp_overlap 644304 644298 TGATGCAAATGAAAA CTAGGCCT TTATT AAGCCTAG TTTTTAGATTAAGGA TERM 839 644324 - 644304 - T 82 -7.6 -4.56914 | opp_overlap 644304, overlap 644298 TGATGCAAATGAAAA CTAGGCCT TTATT AAGCCTAG TTTTTAGATTAAGGA SAK_0711 644813 - 644328 - | NUDIX family hydrolase SAK_0712 645281 - 644826 - | hypothetical protein TERM 840 645697 - 645677 - g 79 -4.7 -5.0916 | opp_overlap 645677 CTTGGAACACAAAAA GCTGTTGAC AAC GTAAACAAC GTTATTGCAGAAGCA eno 645479 - 646786 + | phosphopyruvate hydratase TERM 841 646856 - 646812 - T 100 -14.8 -4.21827 | gap 1, opp_overlap 646823, overlap 646814 646823 TTAAACAGTTGAAAA TATA-ATAAAAACCATCTTGC ATAT GCAAGATGGTTTTTATGTACA CATTATAATAATAGA TERM 842 646854 - 646814 - T 100 -15.2 -3.70051 | gap 1, opp_overlap 646823, overlap 646812 646823 AAACAGTTGAAAATA TA-ATAAAAACCATCTTGC ATAT GCAAGATGGTTTTTATGTA CACATTATAATAATA TERM 843 646823 - 646844 + T 100 -13.1 -4.9725 | opp_overlap 646823 646814 646812 AAAATATAATAAAAA CCATCTTGC ATAT GCAAGATGG TTTTTATGTACACAT TERM 844 646844 - 646823 - T 100 -13.1 -5.35365 | opp_overlap 646823, overlap 646814 646812 AAAATATAATAAAAA CCATCTTGC ATAT GCAAGATGG TTTTTATGTACACAT SAK_0714 647958 - 646894 - | hypothetical protein TERM 845 647085 - 647097 + g 74 -7.7 -3.97741 | overlap 647084 TTTGAGCTTCAGCAG CAAGC CTT GCTTG TTCTTCTTCCAGTTT TERM 846 647182 - 647193 + g 70 -3 -5.20331 | TTTTTCTTCTTCGTG CTTA GCGA TAAG TTTTCTTTGTTCTTT aroA 648187 - 649470 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroK 649463 - 649975 + | shikimate kinase TERM 847 650120 - 650100 - g 78 -5.5 -5.02074 | CTATCTTTTAAAAAA CATCCATTA TCT TAATGAACG TGAAAAGATGGAATT SAK_0717 650032 - 651405 + | transcriptional regulator, putative TERM 848 651426 - 651448 + F 91 -7.1 -5.22289 | opp_overlap 651426 TTAATTATGATATAA TAGAGTGAT TTATT GTCACTCTA TTTTTATCTTTAGTG TERM 849 651516 - 651504 - f 72 -4.9 -4.75518 | GATATAAAAGGAAAA TTATG TTA CATAA AAATGATATTATTGA TERM 850 651574 - 651590 + G 70 -3 -5.09762 | overlap 651572 GGGAATGGGTATTGC CAAAGT AGATG GCTTTG TTTTCTTTGTTGAAA rumA 651506 - 652861 + | 23S rRNA (uracil-5-)-methyltransferase RumA TERM 851 652885 - 652912 + F 82 -10.8 -2.69151 | opp_overlap 652885 652891, overlap 652891 GATAAATGGAAATAG TAAAAAGCCTTA ATTT TAAGGCTTTTTG TCGTATGTAGGGGAA TERM 852 652891 - 652906 + F 89 -7.6 -4.96762 | opp_overlap 652885 652891, overlap 652885 TGGAAATAGTAAAAA GCCTTA ATTT TAAGGC TTTTTGTCGTATGTA TERM 853 652906 - 652891 - f 89 -7.6 -4.93696 | opp_overlap 652891 652885, overlap 652885 TGGAAATAGTAAAAA GCCTTA ATTT TAAGGC TTTTTGTCGTATGTA SAK_0719 653383 - 653901 + | hypothetical protein TERM 854 653948 - 653970 + T 84 -5.6 -5.38054 | opp_overlap 653948 653950 AAAATGGTCACAAAA GGCGATAG GAGAAAA CTATCGTC TTTTTCTTTATAAAG SAK_0720 654124 - 654026 - | hypothetical protein SAK_0721 654733 - 654203 - | TetR family transcriptional regulator TERM 855 654468 - 654438 - G 100 -7 -5.42862 | opp_overlap 654442 ATATTTGGAAAAAAA CAAACAAAGGACTT AAT AATTTCTTTGTTTG TATACATATAGTTAA TERM 856 654582 - 654562 - G 73 -6.1 -4.37067 | opp_overlap 654564, overlap 654564 CAAAGATTATTAAAA TAGACTCCC TAA GGAAGTCTT CTTTTGAATTGAAAT TERM 857 654580 - 654564 - G 78 -8.7 -3.77413 | opp_overlap 654564, overlap 654562 AAGATTATTAAAATA GACTCCC TAA GGAAGTC TTCTTTTGAATTGAA TERM 858 654564 - 654580 + g 73 -6.5 -4.25859 | opp_overlap 654564 654562 AAGATTATTAAAATA GACTCCC TAA GGAAGTC TTCTTTTGAATTGAA SAK_0722 654904 - 660228 + | collagen-like surface protein, putative TERM 859 660385 - 660357 - f 71 -5.3 -4.59853 | opp_overlap 660358, overlap 660358 TTAATTCTTGAAAAA GCCTATCGAGATT ATT AATTCCGATAGGT TTTTGATTTTGTATG TERM 860 660358 - 660384 + F 95 -8.8 -5.15526 | opp_overlap 660358 660357 TAATTCTTGAAAAAG CCTATCGAGATT ATT AATTCCGATAGG TTTTTGATTTTGTAT TERM 861 660384 - 660358 - f 74 -8.8 -3.3543 | opp_overlap 660358, overlap 660357 TAATTCTTGAAAAAG CCTATCGAGATT ATT AATTCCGATAGG TTTTTGATTTTGTAT TERM 862 660692 - 660702 + F 73 -8.2 -3.41738 | opp_overlap 660691, overlap 660691 ATATTCCTAGAGCAT CGGG CAT CCCG TATCTTTATTGGGGA TERM 863 662890 - 662877 - g 73 -5.3 -4.62002 | overlap 662879 ACCAAGTATATAAAA TGTTG CTAT CAACA AGTTACTATAAACCC SAK_0723 661088 - 662956 + | hypothetical protein TERM 864 662954 - 662981 + F 100 -14.4 -5.72207 | opp_overlap 662958 GAAATGAAAACCTTA TAAACCATCACA AATT TGTGATGGTTTA TTTTTTTGGTTTCAA TERM 865 662977 - 662958 - f 93 -10.8 -3.97406 | opp_overlap 662954 TGAAAACCTTATAAA CCATCACA AATT TGTGATGG TTTATTTTTTTGGTT TERM 866 663018 - 663000 - f 71 -5.2 -4.56597 | opp_overlap 662991 663000 663001, overlap 663001 TTTTGGTTTCAAAAA GCGGAAAC TCA GCTTCCGG TTTTGAGATTGAATT TERM 867 663017 - 663001 - f 74 -8.7 -3.33744 | opp_overlap 663001 663000 662991, overlap 663000 TTTGGTTTCAAAAAG CGGAAAC TCA GCTTCCG GTTTTGAGATTGAAT SAK_0724 663365 - 663934 + | hypothetical protein TERM 868 663970 - 663937 - T 85 -6.7 -5.10665 | opp_overlap 663942, overlap 663942 ACTCAACAAATAAAA CCAAATCGCCATCTC AACT GAGGTGGCGATTTTT TGTCAGTCTTTTTGA TERM 869 663965 - 663942 - T 100 -11 -4.39227 | opp_overlap 663942, overlap 663937 ACAAATAAAACCAAA TCGCCATCTC AACT GAGGTGGCGA TTTTTTGTCAGTCTT TERM 870 663942 - 663965 + T 100 -13.2 -5.30686 | opp_overlap 663937 663942 ACAAATAAAACCAAA TCGCCATCTC AACT GAGGTGGCGA TTTTTTGTCAGTCTT SAK_0725 665928 - 663973 - | prophage LambdaSa04, DNA polymerase TERM 871 665970 - 665949 - R 100 -11.6 -4.82901 | opp_overlap 665967 GTCCTTTCATAAAAA GGTGGCAG GAGTGG CTGCCACC GGAGGTGTTATCGGC SAK_0726 666142 - 665978 - | hypothetical protein SAK_0727 666722 - 666159 - | hypothetical protein TERM 872 666230 - 666242 + g 71 -4.8 -4.64144 | GTCCACCAAGTGGCT CTCC ATCAC GGAG TTTTTGCAAGTTATT SAK_0728 667848 - 666727 - | hypothetical protein SAK_0729 668164 - 667841 - | hypothetical protein TERM 873 667958 - 667969 + g 73 -5.8 -4.36914 | AACTTCGTTCTTGTA GCCA TCTT TGGC TTTTGTCGCAAGGAC TERM 874 668309 - 668321 + H 71 -7.7 -3.55203 | overlap 668313 668314 TAAGTAAGGTTTTGA GTGGA TTT TCCAC TTTGGAAGAGATTTT TERM 875 668417 - 668451 + H 84 -5.2 -5.40072 | opp_overlap 668422, overlap 668422 AAATTTGCTCATCAA AAAAAGTTTCCTGT GCATTTA ATAGGAAACTTTTA TTTTTTTAGAAAAAA TERM 876 668446 - 668422 - H 77 -2.9 -5.52384 | opp_overlap 668417 668422 TGCTCATCAAAAAAA GTTTCCTGT GCATTTA ATAGGAAAC TTTTATTTTTTTAGA TERM 877 668422 - 668446 + H 85 -5.1 -5.55855 | opp_overlap 668422, overlap 668417 TGCTCATCAAAAAAA GTTTCCTGT GCATTTA ATAGGAAAC TTTTATTTTTTTAGA SAK_0730 668561 - 670846 + | prophage LambdaSa04, DNA primase SAK_0731 670867 - 670971 + | hypothetical protein SAK_0732 671130 - 671411 + | hypothetical protein SAK_0733 671392 - 672768 + | prophage LambdaSa04, SNF2 family helicase SAK_0734 672761 - 673258 + | hypothetical protein TERM 878 673630 - 673605 - f 72 -4.7 -4.74518 | opp_overlap 673610, overlap 673610 AATCAGTAAAATAAA CCCAAGCCT AGCCCAAA AGGGTTGGG CTTTTTGCGTGGAGG TERM 879 673610 - 673631 + F 93 -10.1 -4.65895 | opp_overlap 673605 673610 GTAAAATAAACCCAA GCCTAGCCC AAAA GGGTTGGGC TTTTTGCGTGGAGGA metK 673651 - 674688 + | S-adenosylmethionine synthetase SAK_0737 674690 - 675055 + | prophage LambdaSa04, HNH endonuclease family protein TERM 880 675663 - 675686 + F 100 -8.9 -5.34555 | opp_overlap 675665 TGCATACGATGAATT GACTTGCCA AAACTG TGGCAGGTC TTTTTTATCCTATGC SAK_0738 675788 - 677026 + | prophage LambdaSa04, DNA methylase SAK_0739 677023 - 678276 + | prophage LambdaSa04, methyltransferase C-5 SAK_0740 678619 - 679068 + | hypothetical protein TERM 881 679073 - 679089 + F 70 -4.4 -4.77165 | opp_overlap 679068 679073, overlap 679068 TACAAGAATAGACAA GGTTTC GCTAA GAAGCC TTTTCTTGTGCCAAA SAK_0741 679165 - 679578 + | prophage LambdaSa04, P27 family terminase small subunit TERM 882 679833 - 679814 - g 81 -4.2 -5.28942 | overlap 679815 GATTCCAAAGAAAAA TGGCAAGT CTGA ACTCGCCG CAGCTATTGCTCTCT TERM 883 679832 - 679815 - g 72 -7.7 -3.76281 | overlap 679814 ATTCCAAAGAAAAAT GGCAAGT CTGA ACTCGCC GCAGCTATTGCTCTC TERM 884 680763 - 680777 + G 70 -6.4 -4.1552 | overlap 680751 AATGTTGTTCACTAT GGTTTC ATC GAAGCC TTTATTGAACAACTC SAK_0742 679575 - 681167 + | prophage LambdaSa04, terminase, large subunit SAK_0743 681223 - 681525 + | prophage LambdaSa04, RelB antitoxin family protein SAK_0744 681525 - 681830 + | prophage LambdaSa04, RelE/ParE family protein SAK_0745 681847 - 682119 + | hypothetical protein TERM 885 682169 - 682151 - f 72 -7.4 -3.78449 | opp_overlap 682151 AAGAATATATCGAAA GCACTTCA AAA TGAGGTGC TTTTTTCGTACCCAA TERM 886 682151 - 682169 + F 100 -9.6 -5.14563 | opp_overlap 682151 AAGAATATATCGAAA GCACTTCA AAA TGAGGTGC TTTTTTCGTACCCAA TERM 887 682853 - 682841 - g 71 -4.8 -4.56775 | AGCCTTCTTCAAAAA TGGG GCTAA CCCA GGTGGTGTCTTAGAG TERM 888 683298 - 683269 - g 81 -9.3 -3.78775 | gap 1, opp_overlap 683286 GTGGCGATTACCAAA GCCGTATGAATGGC TAT GCCAT-CGCACGGC AAAATGGATGGCTTT SAK_0746 682200 - 683489 + | prophage LambdaSa04, HK97 family portal protein TERM 889 683662 - 683615 - g 74 -7.8 -3.89524 | gap 1, opp_overlap 683620 683622, overlap 683618 ACTTGACTTCAGAAA CAGGCGACATCACCCTCTGGA TCAATAG TCCAGGGGGTGATGT-GTTTG CGGCTGCTCAAATCT TERM 890 683620 - 683658 + G 100 -14.7 -3.58343 | opp_overlap 683618 683615, overlap 683622 ACTTCAGAAACAGGC GACATCACCCTCTGGAT CAATA GTCCAGGGGGTGATGTG TTTGCGGCTGCTCAA TERM 891 683622 - 683656 + G 100 -17.3 -3.36991 | opp_overlap 683618 683615, overlap 683620 TTCAGAAACAGGCGA CATCACCCTCTGGAT CAATA GTCCAGGGGGTGATG TGTTTGCGGCTGCTC SAK_0747 683482 - 684180 + | prophage LambdaSa04, ClpP endopeptidase SAK_0748 684194 - 685402 + | prophage LambdaSa04, HK97 family major capsid protein TERM 892 685542 - 685563 + G 73 -8.7 -3.3353 | opp_overlap 685542 685541 685531, overlap 685539 AGAAGTTCTAAAGAC GGCAATCCT CTAT GGGGTTGCC TATCTTTATGAACAC SAK_0749 685399 - 685656 + | hypothetical protein SAK_0750 685656 - 685994 + | prophage LambdaSa04, head-tail adaptor, putative TERM 893 686342 - 686313 - g 78 -3.7 -5.40474 | gap 1, overlap 686314 ACCTGTCGAAAAAAA GGCAATTCAGTCTT TTG AAGAC-AAATTGCG ACAGAAACTGTGAGG TERM 894 686341 - 686314 - g 71 -7.2 -3.83561 | gap 1, overlap 686313 CCTGTCGAAAAAAAG GCAATTCAGTCTT TTG AAGAC-AAATTGC GACAGAAACTGTGAG SAK_0751 685987 - 686355 + | hypothetical protein TERM 895 686605 - 686578 - g 100 -7.1 -5.49569 | gap 1, opp_overlap 686576 686578 TAGCAACAGAAAAAA CGGTGGA-ATCA GTCCT TGATGCCCACCG TCTTTATTTTGACAA SAK_0752 686364 - 686690 + | hypothetical protein SAK_0753 686693 - 687262 + | prophage LambdaSa04, phi13 family major tail protein TERM 896 687537 - 687560 + G 78 -6.8 -4.63044 | opp_overlap 687537 TGCCAAGTCAGCCAA TCCTCGAA TCAAGCCC TTCGAGGA TTTCTTTATGTCGAT SAK_0754 687274 - 687693 + | hypothetical protein SAK_0755 687762 - 687857 + | hypothetical protein TERM 897 688086 - 688074 - g 72 -7.7 -3.6761 | GGGTGTGAATAAACA GGCTT CTG AAGCC ACCAAAGAACTGCGT SAK_0756 687988 - 691107 + | prophage LambdaSa04, TP901 family tail tape measure protein TERM 898 691541 - 691558 + G 75 -7 -4.28361 | opp_overlap 691540 691541 TGGCGTACTGAAAAC GCAAGG TTCTGC CCTTGC TTTTCCTACCATTAC SAK_0757 691104 - 691829 + | prophage LambdaSa04, tail protein, putative TERM 899 693894 - 693915 + G 77 -10.2 -3.14962 | opp_overlap 693894 693891, overlap 693892 693891 TGACTGTTAAGATGA CCTGTACC AAAGCA GGTACAGG TGGTTTTCATCGTAA TERM 900 693915 - 693894 - g 74 -10.2 -2.74523 | opp_overlap 693892 693891 693894, overlap 693891 TGACTGTTAAGATGA CCTGTACC AAAGCA GGTACAGG TGGTTTTCATCGTAA SAK_0758 691829 - 694744 + | prophage LambdaSa04, minor structural protein TERM 901 695893 - 695881 - g 76 -7.7 -4.17762 | overlap 695869 TAGTGTCCAAAAGAA CAAGG CGG CCTTG ACATGGGAAGTAGTC SAK_0759 694757 - 696613 + | prophage LambdaSa04, minor structural protein, putative SAK_0760 696631 - 697029 + | prophage LambdaSa04, holin SAK_0761 697031 - 698041 + | prophage LambdaSa04, mannosyl-glycoprotein endo-beta-N-acetylglucosamidase family protein TERM 902 698316 - 698326 + GF 71 -6.8 -4.06384 | opp_overlap 698316 TTATACGGTTCAAAA GGGT GAT ACCC TTTATGGTATTGCAC TERM 903 698326 - 698316 - gf 71 -6.8 -4.10657 | opp_overlap 698316 TTATACGGTTCAAAA GGGT GAT ACCC TTTATGGTATTGCAC SAK_0762 697996 - 698436 + | prophage LambdaSa04 LysM domain-containing protein TERM 904 698717 - 698673 - f 76 -5.2 -4.93898 | gap 1, overlap 698677 AGATGACGACAAAAA GAAATAACCCGTCCCCACT TTTGACCG AGTA-GGACGAGTTATATC GAAATATTGGGTCAC TERM 905 698713 - 698677 - f 73 -4.6 -4.98911 | gap 1, overlap 698673 GACGACAAAAAGAAA TAACCCGTCCCCACT TTTGACCG AGTA-GGACGAGTTA TATCGAAATATTGGG TERM 906 698756 - 698780 + F 100 -13.7 -4.92314 | TAACGGTTCTACATT GGAGTTGAGTT GGT AGCTCAACTCC TTTTTCTACGTTCAT TERM 907 698992 - 699015 + F 86 -7.4 -4.92314 | AACGGTCCTACATTG GGGGTTGGAT TGCC GTCCAGCTCC TTTTTATAAGTTCAT TERM 908 699051 - 699070 + F 74 -2.1 -5.67529 | overlap 699058 CATACTTGTATCTCA GCGTG TTGAAATAGC CACGC TTTTTCTTTTTGCTT TERM 909 699058 - 699076 + F 83 -6 -5.25735 | overlap 699051 GTATCTCAGCGTGTT GAAATAGC CAC GCTTTTTC TTTTTGCTTTTTTCA SAK_0763 699217 - 700458 + | prophage LambdaSa04, site-specific recombinase resolvase family protein SAK_0764 700361 - 701707 + | prophage LambdaSa04, site-specific recombinase resolvase family protein SAK_0765 701777 - 702550 + | hypothetical protein TERM 910 702851 - 702832 - g 81 -9.4 -3.75295 | GACAAATCAGTGAAA TTGATGCA CTTG TGCATCAA CAAAGAATATTAGAT SAK_0766 702564 - 704069 + | serine/threonine protein kinase, putative SAK_0767 704319 - 704531 + | hypothetical protein aphA 704649 - 705386 + | acid phosphatase/phosphotransferase SAK_0769 705707 - 706225 + | hypothetical protein TERM 911 706271 - 706295 + T 76 -3.6 -5.38054 | AAAATGGTTACCAAA GGCGATAG AAGAAAAAA CTATCGTC TTTTTCTTTATAAAG SAK_0770 706590 - 706354 - | hypothetical protein TERM 912 706728 - 706708 - H 74 -6.1 -4.37067 | opp_overlap 706710, overlap 706710 CAAAGATTATTAAAA TAGACTCCC TAA GGAAGTCTT CTTTTGAATTGTAAT TERM 913 706710 - 706726 + H 70 -6.5 -4.27465 | opp_overlap 706708 706710 AAGATTATTAAAATA GACTCCC TAA GGAAGTC TTCTTTTGAATTGTA TERM 914 706726 - 706710 - H 79 -8.7 -3.77413 | opp_overlap 706710, overlap 706708 AAGATTATTAAAATA GACTCCC TAA GGAAGTC TTCTTTTGAATTGTA SAK_0771 707062 - 707394 + | cell wall surface anchor family protein, truncation SAK_0772 708264 - 707515 - | ISSag5, transposase orfB TERM 915 708191 - 708206 + g 70 -3.3 -5.04868 | AGAATGACTTTGATA GACTT CACACC AAGTC TTTTGTTTGCTTTGG TERM 916 708351 - 708327 - R 87 -8.6 -4.18494 | opp_overlap 708329 GATTGCCACGTAAAA CACGACACAA GGTTG TTGTGGCGTG TTCAAAGCGTAACCG SAK_0773 708659 - 708384 - | ISSag5, transposase orfA TERM 917 708823 - 708863 + r 78 -9.1 -3.44622 | opp_overlap 708809 708823 708831, overlap 708824 AGAATCATCAAGTGA CTCATGAACACGTGTCAAT CTT ATTGACCTGCGTTCATGAA TTGATTGTGGAAATC TERM 918 708863 - 708823 - R 86 -11.3 -2.59035 | opp_overlap 708823 708824, overlap 708809 708831 AGAATCATCAAGTGA CTCATGAACACGTGTCAAT CTT ATTGACCTGCGTTCATGAA TTGATTGTGGAAATC TERM 919 708824 - 708862 + r 89 -12.6 -2.66452 | opp_overlap 708809 708823 708831, overlap 708823 GAATCATCAAGTGAC TCATGAACACGTGTCAAT CTT ATTGACCTGCGTTCATGA ATTGATTGTGGAAAT SAK_0774 709664 - 709317 - | chaperone protein HslO, putative SAK_0775 711066 - 709858 - | AraC family transcriptional regulator TERM 920 712403 - 712389 - g 81 -7.2 -4.57073 | overlap 712396 GACCCTTGTTAAAAA TCAAGA TGC TCTTGA TAAAGCTACTGCAAA SAK_0776 711448 - 713112 + | cell wall surface anchor family protein TERM 921 713137 - 713119 - f 91 -8.2 -5.02357 | opp_overlap 713118 713119 GATAACTAAATAAAA GGCTACTT CTT AAGTAACC ATGTTTAAGAAAAGA TERM 922 713151 - 713170 + F 93 -8 -5.1286 | opp_overlap 713151 CCATGTTTAAGAAAA GAGAAATA GCCT TATTTCTC TTTTTGTCGTTTTTA TERM 923 713170 - 713151 - f 85 -8 -4.64676 | opp_overlap 713151 CCATGTTTAAGAAAA GAGAAATA GCCT TATTTCTC TTTTTGTCGTTTTTA SAK_0777 713201 - 714124 + | cell wall surface anchor family protein TERM 924 714428 - 714393 - gf 91 -12 -3.55761 | gap 1, opp_overlap 714392 714395, overlap 714416 TATCCAGCGCTTAAA GACCCCTACTCTGCT GAACAAA AGCAG-GCAGGGGTC GTTGAGTACGCCCGC SAK_0778 714126 - 715043 + | sortase family protein SAK_0779 715000 - 715851 + | sortase family protein TERM 925 717474 - 717464 - g 75 -5.4 -4.72863 | CGAAACAAATCAAAA CTCA TGG TGAG CCAACAACATTATAC SAK_0780 715933 - 718605 + | Cna B domain-containing protein TERM 926 719317 - 719289 - f 80 -8.9 -3.75292 | opp_overlap 719290, overlap 719290 719292 ACTTATCATTAACAA CGAGAGAGAATCA GCT TGGTTCTCTCTCT TTTTGGATGTTCAAA TERM 927 719290 - 719316 + F 100 -14.6 -4.74706 | opp_overlap 719289 719290 719292 CTTATCATTAACAAC GAGAGAGAATCA GCT TGGTTCTCTCTC TTTTTGGATGTTCAA TERM 928 719316 - 719290 - f 90 -12.4 -2.84693 | opp_overlap 719290, overlap 719289 719292 CTTATCATTAACAAC GAGAGAGAATCA GCT TGGTTCTCTCTC TTTTTGGATGTTCAA TERM 929 719314 - 719292 - f 73 -9.2 -2.96963 | opp_overlap 719290, overlap 719290 719289 TATCATTAACAACGA GAGAGAATCA GCT TGGTTCTCTC TCTTTTTGGATGTTC TERM 930 719368 - 719389 + F 80 -9.5 -3.43328 | gap 1, opp_overlap 719366 AAAATTTTTAAAGTT GCGA-AAGCC AAA GGCTTGTCGC TTGATGTCTTTGATA TERM 931 720263 - 720245 - g 74 -9.6 -3.09635 | AGGCTGATTACCCAA TGGCTGAT AAT ACCAGCCA TGTGGAGTGCGTAGC SAK_0782 719698 - 720303 + | Cna B domain-containing protein TERM 932 720465 - 720487 + F 100 -7.8 -5.72207 | AATTTCTGGCATTAC GAGAACATTT CTA GAGTGTTCTC TTTTTTTAGTTTACG TERM 933 722624 - 722575 - f 100 -16.1 -2.702 | opp_overlap 722582, overlap 722582 722585 AGTATCTCATATAAG CATAAAACGAGGAATCAATCAAA ATTT CTTGATTGATTCCTTGTTTTTTG GCTCTTTGTCAACTG TERM 934 722582 - 722617 + F 100 -14.3 -5.18561 | opp_overlap 722575 722582 722585 CATATAAGCATAAAA CGAGGAATCAATCAA AATTTC TTGATTGATTCCTTG TTTTTTGGCTCTTTG TERM 935 722617 - 722582 - f 100 -12.8 -4.60073 | opp_overlap 722582, overlap 722575 722585 CATATAAGCATAAAA CGAGGAATCAATCAAA ATTT CTTGATTGATTCCTTG TTTTTTGGCTCTTTG TERM 936 722614 - 722585 - f 100 -13.1 -3.22817 | opp_overlap 722582, overlap 722582 722575 ATAAGCATAAAACGA GGAATCAATCAAA ATTT CTTGATTGATTCC TTGTTTTTTGGCTCT TERM 937 722667 - 722691 + F 100 -15.9 -4.87626 | GAAAAATTATATTCT GGAGAAAACCA AAT TGGTTTTCTCC TTTTTGATATTCAAA SAK_0785 722922 - 723191 + | hypothetical protein SAK_0786 723252 - 724403 + | beta-lactamase, putative TERM 938 724456 - 724405 - f 85 -10.6 -3.56862 | gap 1, opp_overlap 724409 724421, overlap 724410 724421 AGAAACGTCTCTAAA TCACA-TGAATAAAAAAGAAGGCTA AGT TGGCCTTCTTTTTTATTCAATATTA AGCAGTAACACCATC TERM 939 724409 - 724451 + F 100 -17.4 -3.03124 | opp_overlap 724405 724410 724421, overlap 724421 ACGTCTCTAAATCAC ATGAATAAAAAAGAAGGCTA AGT TGGCCTTCTTTTTTATTCAA TATTAAGCAGTAACA TERM 940 724450 - 724410 - f 100 -18.7 -3.00525 | opp_overlap 724409 724421, overlap 724405 724421 CGTCTCTAAATCACA TGAATAAAAAAGAAGGCTA AGT TGGCCTTCTTTTTTATTCA ATATTAAGCAGTAAC TERM 941 724421 - 724439 + F 100 -9.6 -5.49234 | opp_overlap 724410 724405 724421, overlap 724409 CACATGAATAAAAAA GAAGGCTA AGT TGGCCTTC TTTTTTATTCAATAT TERM 942 724439 - 724421 - f 100 -7.4 -5.5353 | opp_overlap 724421 724409, overlap 724410 724405 CACATGAATAAAAAA GAAGGCTA AGT TGGCCTTC TTTTTTATTCAATAT TERM 943 725505 - 725486 - g 72 -7.9 -3.72576 | GTTCTCGCTACCAAA CTGCTGA CATAAT TCAGCAG ACATTAGCAGATTTT SAK_0787 724603 - 725595 + | ABC transporter, ATP-binding protein TERM 944 725947 - 725957 + G 73 -5.4 -4.70659 | TGGAGATTGGTTCTA GATG GCT CATC TTTTTAAGTATAGGG SAK_0788 725598 - 726416 + | hypothetical protein SAK_0789 726418 - 727203 + | hypothetical protein TERM 945 727283 - 727338 + F 81 -10.7 -2.89564 | opp_overlap 727283 GTTAGTGATGATATA CTCCCCTTATAGTGTCTAGTGAA TTTTTGTTTT TTTACTGTCCACTATAAGGGGAG TATATCAGGTGAAGA TERM 946 727455 - 727429 - f 100 -11 -4.88295 | opp_overlap 727429 AAATAAAGTTAAAAA CGCTCTTAGA TGTGCTT TCTAAGAGCG TTTTTTGGTCTATAA TERM 947 727429 - 727455 + F 100 -11 -5.24989 | opp_overlap 727429 AAATAAAGTTAAAAA CGCTCTTAGA TGTGCTT TCTAAGAGCG TTTTTTGGTCTATAA cylX 727828 - 728133 + | cylX protein cylD 728133 - 728981 + | CylD protein TERM 948 729085 - 729059 - g 83 -9.6 -3.95653 | overlap 729060 729076 AAAGAAGGTTACAAA GTCATTGCTATT TAT AATAGCAATGAT GCTAAGGCAAGAGCT TERM 949 729084 - 729060 - g 93 -13.1 -2.96307 | overlap 729059 729076 AAGAAGGTTACAAAG TCATTGCTATT TAT AATAGCAATGA TGCTAAGGCAAGAGC cylG 728978 - 729700 + | cylG protein TERM 950 729935 - 729908 - g 71 -7.2 -3.90112 | opp_overlap 729882 TGGTGTTGAACTAAA TGATGATGATAT TTCA ATATTATCATCA GTAAATAGACTAGCA SAK_0793 729693 - 729998 + | acyl carrier protein TERM 951 730424 - 730414 - g 93 -6.8 -5.58179 | GATGAGAATAAAAAA GAGG TTG CCTC AGGAAGGATGTTGGT cylZ 729982 - 730458 + | cylZ protein cylA 730448 - 731377 + | ABC transporter, ATP-binding protein CylA cylB 731370 - 732248 + | ABC transporter, permease protein CylB cylE 732245 - 734248 + | CylE protein cylF 734245 - 735198 + | cylF protein TERM 952 737093 - 737113 + G 75 -6.9 -4.31835 | AGATGTGATGACTAT TTTTGATGC TGC GCTTCAAAA TTTATTATCAGACTT cylI 735195 - 737390 + | cylI protein TERM 953 737503 - 737479 - g 87 -12.3 -3.26319 | overlap 737482 AATTGTTTATATGAA CAAGGACATGA TAT TCATATCCTTG GAGACAATTATTATC TERM 954 737500 - 737482 - g 74 -8.2 -3.7732 | overlap 737479 TGTTTATATGAACAA GGACATGA TAT TCATATCC TTGGAGACAATTATT cylJ 737395 - 738606 + | CylJ protein cylK 738614 - 739150 + | CylK protein SAK_0802 739493 - 739834 + | hypothetical protein TERM 955 739918 - 739938 + G 73 -6.8 -4.20783 | overlap 739921 TAGGAAAAGTAAAGT GTGCCGCA GCCTA TGCGGTGC TTTATTGGGTACAGT SAK_0803 739868 - 740383 + | hypothetical protein TERM 956 741564 - 741554 - g 88 -5.4 -5.56264 | overlap 741555 TTTAAAGATAAAAAA TCTG GAA CAGA AGTTACAGAAGTCAT SAK_0804 740435 - 743092 + | S8 family peptidase TERM 957 744710 - 744690 - g 71 -6.9 -3.82923 | opp_overlap 744692, overlap 744688 744692 AAGCCAATGAAAATA CAGCAAAAG TAA CCTTTGCTA ATATTGACTGGTCAC SAK_0805 743195 - 746419 + | hypothetical protein TERM 958 746514 - 746483 - f 87 -11.8 -2.73124 | opp_overlap 746488 746509, overlap 746488 TTTTATCTCTTAAAT CAAAAGTAGTAGCT CATT AGCTACTACTTTTT TGTATAAGTGTAAAA TERM 959 746488 - 746509 + F 100 -11.7 -5.38047 | opp_overlap 746483 746488 TCTCTTAAATCAAAA GTAGTAGCT CATT AGCTACTAC TTTTTTGTATAAGTG TERM 960 746509 - 746488 - f 100 -11.7 -4.54727 | opp_overlap 746488, overlap 746483 TCTCTTAAATCAAAA GTAGTAGCT CATT AGCTACTAC TTTTTTGTATAAGTG TERM 961 749056 - 749044 - g 76 -3.5 -5.26875 | CGGTTAAGTAAAAAA TATAA AAT TTATA CAGTAGAACCATTAG TERM 962 749308 - 749294 - g 77 -2.8 -5.4756 | AAGGGGAACAAAAAA CAAAGT ATG ACCCTG AAAGTGCTAAATGGG SAK_0807 748666 - 749697 + | hypothetical protein TERM 963 750107 - 750095 - g 73 -3.5 -5.11613 | AGATTAGGGAAAAAA TATAA AAT TTATA CGGTTGAACCGCTCG SAK_0808 749732 - 750751 + | hypothetical protein SAK_0809 750786 - 751847 + | hypothetical protein TERM 964 751932 - 751889 - f 100 -13.5 -2.95884 | gap 1, opp_overlap 751889 751892, overlap 751892 TCACTAATTGATAGA TAACG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCGTTA TTCTAGAGATTATTA TERM 965 751889 - 751932 + F 100 -13.5 -3.34947 | gap 1, opp_overlap 751889 751892, overlap 751892 TCACTAATTGATAGA TAACG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCGTTA TTCTAGAGATTATTA TERM 966 751892 - 751929 + F 90 -10.8 -3.8062 | gap 1, opp_overlap 751892 751889, overlap 751889 CTAATTGATAGATAA CG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCG TTATTCTAGAGATTA TERM 967 751929 - 751892 - f 89 -10.8 -3.61983 | gap 1, opp_overlap 751889 751892, overlap 751889 CTAATTGATAGATAA CG-TAGAAGTCGATAGA GAATA TCTAACGACTTCTATCG TTATTCTAGAGATTA TERM 968 752421 - 752397 - g 76 -6.5 -4.46621 | GATAATACAAAACAA GTACTAGTTTC ATT GAAATTAGCAC AAAAGAATCATTTAA SAK_0810 751971 - 753200 + | permease, putative TERM 969 753798 - 753778 - f 79 -6.9 -4.57209 | opp_overlap 753781, overlap 753781 ACAGTAAGGATAAAA CATTAGTTG AAG CAACTATTG TTGGCATATATAAAG TERM 970 753781 - 753795 + F 70 -7.2 -3.67558 | opp_overlap 753781 753778 GTAAGGATAAAACAT TAGTTG AAG CAACTA TTGTTGGCATATATA TERM 971 754007 - 753993 - f 77 -4.3 -5.14965 | AGTTTTATCAAAAAA CAATC CTATT GATTG GAATAAATACCAACT SAK_0812 754648 - 755319 + | ABC transporter, ATP-binding protein TERM 972 755361 - 755328 - T 86 -4 -5.88565 | gap 1, opp_overlap 755328 TTTATAATAAAAAAA TACCTCC-CTTTCTT AAATA ATAAAAGAGGAGGTA TTTTTTAGAAATGGT SAK_0813 756794 - 755376 - | hypothetical protein TERM 973 755735 - 755747 + g 74 -4.8 -4.86033 | TGACGTTATTGATCA GGGA AAAAG TCCC TTTTTGTGCAGCTTT SAK_0814 757082 - 757867 + | DNA-entry nuclease, putative TERM 974 757865 - 757896 + T 75 -8.2 -3.6216 | opp_overlap 757868 757873, overlap 757873 GAAATAACACTAAAT TAATAAAAGAGCAA CTAA TTGCTCTTTTTTTG TTGTCATTCTTAGTG TERM 975 757893 - 757868 - T 73 -7.7 -3.62191 | opp_overlap 757865 757873, overlap 757873 ATAACACTAAATTAA TAAAAGAGCAA CTAA TTGCTCTTTTT TTGTTGTCATTCTTA TERM 976 757873 - 757888 + T 100 -7.6 -5.89921 | opp_overlap 757873 757868, overlap 757865 ACTAAATTAATAAAA GAGCAA CTAA TTGCTC TTTTTTTGTTGTCAT TERM 977 757888 - 757873 - T 87 -7.6 -4.85545 | opp_overlap 757865 757873, overlap 757868 ACTAAATTAATAAAA GAGCAA CTAA TTGCTC TTTTTTTGTTGTCAT SAK_0815 758583 - 757945 - | DedA family protein SAK_0816 758800 - 759456 + | ABC transporter, ATP-binding protein SAK_0817 759453 - 760226 + | hypothetical protein SAK_0818 760390 - 761208 + | hypothetical protein TERM 978 761238 - 761206 - T 100 -12.3 -4.65933 | opp_overlap 761211, overlap 761211 CATTTGGAAAATAAA TAAAACCAAAAAGTT TTA AACTTTTTGGTTTAA CTGCTATTAATTGGT TERM 979 761211 - 761233 + T 95 -12.2 -3.71607 | opp_overlap 761206 761211 GGAAAATAAATAAAA CCAAAAAGTT TTA AACTTTTTGG TTTAACTGCTATTAA TERM 980 761233 - 761211 - T 100 -12.2 -5.26247 | opp_overlap 761211, overlap 761206 GGAAAATAAATAAAA CCAAAAAGTT TTA AACTTTTTGG TTTAACTGCTATTAA SAK_0819 762129 - 761245 - | LysR family transcriptional regulator TERM 981 761324 - 761344 + g 76 -9.9 -3.05384 | opp_overlap 761323 761322 TAAGCAATACCAATC GGATAAAAA TTA TTTTTATCC TTAAGTGGGACCCAG SAK_0820 762322 - 763380 + | hypothetical protein ldhA 763394 - 764386 + | D-lactate dehydrogenase TERM 982 764402 - 764389 - f 78 -6.7 -4.44548 | opp_overlap 764389 GAGAGTCAACTAAAA GATGC TTAG GCATC TTTTTTTGTGGACTA TERM 983 764389 - 764402 + F 100 -6.7 -5.626 | opp_overlap 764389 GAGAGTCAACTAAAA GATGC TTAG GCATC TTTTTTTGTGGACTA TERM 984 764522 - 764502 - f 79 -2.7 -5.88565 | opp_overlap 764482 764506, overlap 764482 764494 764504 TTTATAATAAAAAAA GATATTTTT TAT AAAAATATT GGCAAAACATCAGAT TERM 985 764520 - 764504 - f 71 -5.3 -4.57921 | opp_overlap 764506, overlap 764494 764502 TATAATAAAAAAAGA TATTTTT TAT AAAAATA TTGGCAAAACATCAG TERM 986 764747 - 764760 + G 80 -6.7 -4.87665 | CTCAACTGGCGTTCT TGGCT TGGC AGCCA TTTTTGTCAGTCAAA SAK_0822 764592 - 766142 + | sugar transporter, putative TERM 987 766174 - 766148 - f 74 -9.5 -2.71995 | opp_overlap 766149, overlap 766140 766147 766146 TAAAGATTAAAAAGT TTAGCTGCTCT TCAAT AGAGCAGCTAT TTTGTTAAATAAGAG TERM 988 766149 - 766173 + F 100 -13 -4.67982 | opp_overlap 766140 766148 766147 766146 AAAGATTAAAAAGTT TAGCTGCTCT TCAAT AGAGCAGCTA TTTTGTTAAATAAGA TERM 989 766789 - 766803 + G 76 -6.4 -4.46112 | overlap 766791 TATCAGATGTTTGCT TTGGCT TAG AGCCGA TTTATTTAGCTGGCG SAK_0823 766209 - 767234 + | PfkB family kinase SAK_0824 767251 - 769050 + | beta-D-glucuronidase SAK_0825 769079 - 769750 + | GntR family transcriptional regulator TERM 990 769757 - 769792 + F 72 -8.6 -3.09061 | opp_overlap 769765, overlap 769765 AAAGCTTAATATAAG AAGAAAAATAGCTATT CTTG AATAGCTATTTTTTTA GTATTTTTCTTGACA TERM 991 769784 - 769765 - f 100 -8 -5.35721 | opp_overlap 769765 769757 ATATAAGAAGAAAAA TAGCTATT CTTG AATAGCTA TTTTTTTAGTATTTT TERM 992 769765 - 769784 + F 100 -8 -5.69023 | opp_overlap 769765, overlap 769757 ATATAAGAAGAAAAA TAGCTATT CTTG AATAGCTA TTTTTTTAGTATTTT eda 769867 - 770484 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 993 770559 - 770536 - g 72 -3.8 -5.05782 | overlap 770541 ATTTATGTTAAAAAA TCAAGCAGCT TTAC AGCTGTATGA AGAGGTCAAGAGACA TERM 994 771446 - 771464 + G 73 -9.6 -2.86217 | overlap 771445 GACGTGGGTGTGGAT TCACTTGG TGA CCAAGTGG CTTTAACTGTTAATA uxaC 770501 - 771901 + | glucuronate isomerase uxuA 771919 - 772965 + | mannonate dehydratase SAK_0829 773089 - 773928 + | D-mannonate oxidoreductase SAK_0830 774081 - 774893 + | hypothetical protein SAK_0831 774909 - 776699 + | glycosy hydrolase family protein TERM 995 776759 - 776731 - T 100 -14.9 -3.08996 | opp_overlap 776731 776739, overlap 776739 TACTTTTATGTAACA TAAAAAAAGAGCT TAA AGCTCTTTTTTTA TCCTTCAAAATAGAG TERM 996 776731 - 776759 + T 100 -14.9 -2.72344 | opp_overlap 776731 776739, overlap 776739 TACTTTTATGTAACA TAAAAAAAGAGCT TAA AGCTCTTTTTTTA TCCTTCAAAATAGAG TERM 997 776751 - 776739 - T 100 -7.7 -5.80817 | opp_overlap 776739 776731, overlap 776731 TGTAACATAAAAAAA GAGCT TAA AGCTC TTTTTTTATCCTTCA TERM 998 776739 - 776751 + T 100 -7.7 -5.71983 | opp_overlap 776731 776739, overlap 776731 TGTAACATAAAAAAA GAGCT TAA AGCTC TTTTTTTATCCTTCA pepQ 777842 - 776757 - | Xaa-Pro dipeptidase TERM 999 777977 - 777965 - H 84 -6.3 -5.24129 | GTTTTTCATAAAAAA GCTTT ATA AAAGC TTGAAAGTGTTTCCA TERM 1000 778262 - 778242 - g 84 -3.3 -5.65513 | opp_overlap 778242 778243, overlap 778243 TAGCAAGTAAAAAAA CGACAAC TGTTGGT GTTGTCA TTCCTAATATCGCAA ccpA 778052 - 779056 + | catabolite control protein A TERM 1001 779144 - 779169 + F 100 -7.7 -5.42862 | gap 1, opp_overlap 779146 ATGATATATTGAGAG GATTAGGGTAGC TTA GCT-TCCTAATC TTTTTTTAGAGGTGT SAK_0834 779188 - 780654 + | cytoplasmic alpha-amylase SAK_0835 780699 - 781697 + | glycosyl transferase, group 1 family protein SAK_0836 781699 - 783033 + | glycosyl transferase, group 1 family protein TERM 1002 783279 - 783310 + F 100 -8.8 -5.60993 | opp_overlap 783277, overlap 783277 783281 TGAGGTGGAACCACG TAGTCTTTACGTCC TTTT GGATGTAAAGGCTC TTTTTTTATAAAAGA TERM 1003 783281 - 783308 + F 100 -11.4 -4.45201 | opp_overlap 783277, overlap 783277 783279 AGGTGGAACCACGTA GTCTTTACGTCC TTTT GGATGTAAAGGC TCTTTTTTTATAAAA thrS 783490 - 785433 + | threonyl-tRNA synthetase TERM 1004 785476 - 785501 + F 82 -6.3 -5.1101 | gap 1 AATAAATGATGTGAA CTGATTACTGTA TGA TGCAG-AATCAG TTTTTTAGATGCTAA TERM 1005 785506 - 785516 + F 86 -4 -5.7827 | TGCAGAATCAGTTTT TTAG ATG CTAA TTTTTTCTTTATGTT SAK_0838 785655 - 786359 + | DNA-binding response regulator TERM 1006 786368 - 786383 + F 79 -4.7 -5.14965 | opp_overlap 786368 TGTTTAAAAATATAA TGGCT AGTAAG AGCCA TTTTTTAGTGAAGAT SAK_0839 786457 - 787476 + | hypothetical protein TERM 1007 787488 - 787521 + F 100 -15.7 -3.67517 | opp_overlap 787488 787494, overlap 787494 CTGATACATATACTA TTAAAAGATACCATA GTAC TATGGTATCTTTTAA TTTGAGGTATTAATG TERM 1008 787521 - 787488 - f 100 -15.7 -2.74597 | opp_overlap 787488 787494, overlap 787494 CTGATACATATACTA TTAAAAGATACCATA GTAC TATGGTATCTTTTAA TTTGAGGTATTAATG TERM 1009 787515 - 787494 - f 95 -10.3 -4.34345 | opp_overlap 787488 787494, overlap 787488 CATATACTATTAAAA GATACCATA GTAC TATGGTATC TTTTAATTTGAGGTA TERM 1010 787494 - 787515 + F 95 -10.3 -4.55798 | opp_overlap 787494 787488, overlap 787488 CATATACTATTAAAA GATACCATA GTAC TATGGTATC TTTTAATTTGAGGTA SAK_0840 787644 - 788210 + | peptidase propeptide/YPEB domain-containing protein TERM 1011 788227 - 788257 + T 87 -12 -2.51312 | opp_overlap 788232, overlap 788232 TTAAATAAGATATAA AAAAACGAAGGTCT AAA AGGCCTTCGTTTTA ATTACTCAGTAGCTT TERM 1012 788252 - 788232 - T 100 -9.7 -5.80248 | opp_overlap 788227 788232 TAAGATATAAAAAAA CGAAGGTCT AAA AGGCCTTCG TTTTAATTACTCAGT TERM 1013 788232 - 788252 + T 100 -11.9 -4.45945 | opp_overlap 788232, overlap 788227 TAAGATATAAAAAAA CGAAGGTCT AAA AGGCCTTCG TTTTAATTACTCAGT SAK_0841 788909 - 788259 - | polar amino acid ABC transporter permease TERM 1014 788721 - 788705 - G 79 -5.2 -5.10601 | AGAAAATGATAAAAA TCCAAA GTAGA TTTGGA ACATTTCTGACAAAT SAK_0842 789616 - 788921 - | polar amino acid ABC transporter permease SAK_0843 790429 - 789629 - | polar amino acid ABC transporter amino acid-binding protein SAK_0844 791196 - 790441 - | polar amino acid ABC transporter ATP-binding protein TERM 1015 791223 - 791239 + H 78 -9.5 -3.37354 | opp_overlap 791218, overlap 791205 AAAATAACAGTTTAT TGTTAGG TTA CCTAACA TTATAGATAAGTGTA SAK_0845 791536 - 792246 + | DNA-binding response regulator SAK_0846 792239 - 793588 + | sensory box histidine kinase SAK_0847 793592 - 794401 + | metallo-beta-lactamase family protein SAK_0848 794404 - 794772 + | hypothetical protein TERM 1016 794818 - 794766 - f 83 -10.9 -2.80345 | opp_overlap 794777 794782, overlap 794777 794780 794782 ACCTGATAAAATTGA TGAATAGTTAACAAGAGACTAGG TGTGTAT CCTAGTCTTTTGTTGAATATTCA AATATGTAATTAAGG TERM 1017 794777 - 794807 + F 83 -10.6 -3.19026 | opp_overlap 794766 794777 794780 794782, overlap 794782 TTGATGAATAGTTAA CAAGAGACTAGG TGTGTAT CCTAGTCTTTTG TTGAATATTCAAATA TERM 1018 794807 - 794777 - f 71 -8.4 -3.20348 | opp_overlap 794777 794782, overlap 794766 794780 794782 TTGATGAATAGTTAA CAAGAGACTAGG TGTGTAT CCTAGTCTTTTG TTGAATATTCAAATA TERM 1019 794782 - 794802 + F 79 -6.9 -4.71776 | opp_overlap 794780 794777 794766 794782, overlap 794777 GAATAGTTAACAAGA GACTAGG TGTGTAT CCTAGTC TTTTGTTGAATATTC rnc 794948 - 795634 + | ribonuclease III TERM 1020 796276 - 796266 - g 73 -5.4 -4.56153 | CCATTAGAAAAACAA GCAA GTA TTGC CAAGCGTTTTTTAGT TERM 1021 796885 - 796875 - g 73 -5.4 -4.56187 | GAGAATCAAAAACAA GCTT CTC AAGC TAAATCTCAAGAAAT smc 795642 - 799181 + | chromosome segregation protein SMC TERM 1022 799178 - 799212 + F 100 -13.8 -3.09429 | opp_overlap 799181 799186, overlap 799186 TCAAGAAATGACCAA TTAGAAAACAGAAGGG GAT CCCTTCTGTTTTTTGG ATTTTCAGCCTTATT TERM 1023 799209 - 799181 - f 100 -13.3 -2.83674 | opp_overlap 799178 799186, overlap 799186 AGAAATGACCAATTA GAAAACAGAAGGG GAT CCCTTCTGTTTTT TGGATTTTCAGCCTT TERM 1024 799186 - 799204 + F 100 -13.2 -5.2696 | opp_overlap 799181 799186, overlap 799178 TGACCAATTAGAAAA CAGAAGGG GAT CCCTTCTG TTTTTTGGATTTTCA TERM 1025 799204 - 799186 - f 100 -13.2 -4.56607 | opp_overlap 799186 799178, overlap 799181 TGACCAATTAGAAAA CAGAAGGG GAT CCCTTCTG TTTTTTGGATTTTCA TERM 1026 799362 - 799341 - g 73 -2.3 -5.31877 | overlap 799342 799343 ACCTATGATAAAAAA CGTTTAGCA AATG TGCTAAAAA AATTTAAAGAACAAG SAK_0851 799272 - 800069 + | Cof-like hydrolase family protein TERM 1027 800199 - 800186 - g 73 -5.3 -4.56887 | overlap 800188 GAAAAAGGTATAAAA GTTGT TATT ACAAC AGGGCGTCCTTTAAA SAK_0852 800069 - 800893 + | Cof-like hydrolase ftsY 800893 - 802503 + | signal recognition particle-docking protein FtsY TERM 1028 802531 - 802511 - T 100 -8.4 -5.55769 | opp_overlap 802511 TTTTATAAGAAAAAA GAACTTTC ATTTA GAAAGTTC TTTTTATATTAAAAG TERM 1029 802511 - 802531 + T 91 -8.4 -5.0916 | opp_overlap 802511 TTTTATAAGAAAAAA GAACTTTC ATTTA GAAAGTTC TTTTTATATTAAAAG SAK_0854 803352 - 802540 - | hypothetical protein TERM 1030 802785 - 802807 + g 72 -9.2 -2.58134 | overlap 802784 802783 802781 GATATCCTTCGTGTT TGGGTTCGTT ATA AACAAACCCA GTATATTGTATTTGG SAK_0855 804254 - 803352 - | permease, putative SAK_0856 804388 - 804260 - | hypothetical protein SAK_0857 804521 - 805564 + | luciferase family protein TERM 1031 805567 - 805579 + F 90 -4.1 -5.95946 | opp_overlap 805567 TGAAAAGAATTAAAG CAGAT CTG GTCTG TTTTTTTATTGTTAG TERM 1032 806116 - 806086 - g 74 -8.4 -3.72592 | opp_overlap 806094, overlap 806068 806087 806094 AACCTTGAGGAAGAA GCTCAAAACTATCT TAC AGATGGTTTTGAGA CAACTACGAAGGCAC TERM 1033 806115 - 806087 - g 84 -11.9 -2.83073 | opp_overlap 806094, overlap 806068 806086 806094 ACCTTGAGGAAGAAG CTCAAAACTATCT TAC AGATGGTTTTGAG ACAACTACGAAGGCA TERM 1034 806493 - 806474 - g 93 -6.4 -5.7946 | overlap 806475 CTGTCAAGAAAAAAA TCGTTCCA GCTA TGGAACGC CGTATCCGTACAGAA TERM 1035 806492 - 806475 - g 86 -9.9 -4.06592 | overlap 806474 TGTCAAGAAAAAAAT CGTTCCA GCTA TGGAACG CCGTATCCGTACAGA SAK_0858 805669 - 807831 + | S1 RNA-binding domain-containing protein SAK_0859 807824 - 808252 + | hypothetical protein SAK_0860 808333 - 808596 + | PspC domain-containing protein TERM 1036 808607 - 808629 + G 88 -4.9 -5.52096 | opp_overlap 808607 GGTAATTCATATAAA GGAGATTTG CTAGA TGAATCTCC TTTTTTCTTAGCTTT SAK_0861 808574 - 808708 + | hypothetical protein hprK 808824 - 809759 + | HPr kinase/phosphorylase TERM 1037 809991 - 810013 + G 70 -8.5 -3.45571 | opp_overlap 809990 809993, overlap 809984 GCACCCAGTAGAGAT TATCGCCAT CTGGA ATGGCGGTA TTGCTATTTACGGAG lgt 809752 - 810525 + | prolipoprotein diacylglyceryl transferase SAK_0864 810540 - 810938 + | hypothetical protein SAK_0865 810935 - 811366 + | hypothetical protein TERM 1038 811391 - 811371 - T 100 -12.7 -6.01725 | opp_overlap 811371 AAGAAAAATAAAAAA GAAGCTACT ATA AGTAGCTTC TTTTTTATGAGATTT TERM 1039 811371 - 811391 + T 100 -12.7 -5.28826 | opp_overlap 811371 AAGAAAAATAAAAAA GAAGCTACT ATA AGTAGCTTC TTTTTTATGAGATTT SAK_0866 811682 - 811407 - | hypothetical protein TERM 1040 811813 - 811823 + H 74 -4 -5.243 | opp_overlap 811813, overlap 811802 ATATTAGTAGTAGAA TACT AAA AGTA TTTTTTACTACTTTC TERM 1041 812604 - 812593 - g 83 -5.8 -5.1675 | opp_overlap 812593 812592 TCACTGATGAAAAAA CACG TGAG CGTG GTCTTTTTTTAGCAG SAK_0867 812037 - 812948 + | U32 family peptidase SAK_0868 813078 - 814364 + | U32 family peptidase SAK_0869 814491 - 814703 + | hypothetical protein TERM 1042 814733 - 814705 - f 95 -10.5 -4.41348 | opp_overlap 814711, overlap 814711 CTTTTCGTAAATAAA TAAAAAGTGGTTT CAA AAACCACTTTTTT TGTCGAGACAAACGA TERM 1043 814711 - 814727 + F 100 -9.5 -5.60993 | opp_overlap 814705 814711 GTAAATAAATAAAAA GTGGTTT CAA AAACCAC TTTTTTTGTCGAGAC TERM 1044 814727 - 814711 - f 100 -9.5 -5.5454 | opp_overlap 814711, overlap 814705 GTAAATAAATAAAAA GTGGTTT CAA AAACCAC TTTTTTTGTCGAGAC SAK_0870 814827 - 815447 + | hypothetical protein TERM 1045 815435 - 815468 + T 89 -11.9 -3.24613 | overlap 815431 ATCATTATGTACTTT CCTCTATCATTAGAT GTAT GTCTCATGATAGAGG TTCAGTTCATTAGTG SAK_0871 816842 - 815502 - | Mn2+/Fe2+ transporter TERM 1046 817418 - 817455 + H 100 -12.9 -5.67063 | opp_overlap 817418 817423 817425, overlap 817423 TTTGTGCTGGATTAA TGAGAGACTCCCTATAG TTTT CTATAGGGAGTCTTTAG TTTTTTTGTGCTACC TERM 1047 817454 - 817418 - H 83 -10.4 -3.14132 | gap 1, opp_overlap 817418 817423, overlap 817423 817425 TTTGTGCTGGATTAA TGAGAGACTCCCTATAG TTTT CTATAGGGAGTCTTT-A GTTTTTTTGTGCTAC TERM 1048 817423 - 817450 + H 100 -17.2 -4.55485 | opp_overlap 817418 817423 817425, overlap 817418 GCTGGATTAATGAGA GACTCCCTATAG TTTT CTATAGGGAGTC TTTAGTTTTTTTGTG TERM 1049 817450 - 817423 - H 100 -17.2 -2.93723 | opp_overlap 817423 817418, overlap 817418 817425 GCTGGATTAATGAGA GACTCCCTATAG TTTT CTATAGGGAGTC TTTAGTTTTTTTGTG TERM 1050 817448 - 817425 - H 100 -14 -3.02096 | opp_overlap 817423 817418, overlap 817423 817418 TGGATTAATGAGAGA CTCCCTATAG TTTT CTATAGGGAG TCTTTAGTTTTTTTG TERM 1051 817516 - 817545 + H 100 -9.5 -5.45802 | gap 1 GACTTCTCATCCCTC CCCTTAGTTTTCTA TTT TAGAAG-CTAAGGG TTTTTATTTTAGAAG ribD 817571 - 818680 + | riboflavin biosynthesis protein RibD ribE 818661 - 819311 + | riboflavin synthase subunit alpha ribBA 819329 - 820522 + | 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II ribE 820537 - 821007 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 1052 821038 - 821078 + T 100 -10.8 -4.16787 | gap 1, opp_overlap 821040 821048, overlap 821040 821048 AAGTTCAGTAGAGGT AATATTAAAACCCA-CCTT AAAT AAGGATGGGTTTTAATATA TTCTTATTTCATTGT TERM 1053 821076 - 821040 - T 100 -13.4 -3.14468 | gap 1, opp_overlap 821040 821038 821048, overlap 821048 GTTCAGTAGAGGTAA TATTAAAACCCA-CCTT AAAT AAGGATGGGTTTTAATA TATTCTTATTTCATT TERM 1054 821040 - 821076 + T 100 -13.4 -3.65974 | gap 1, opp_overlap 821040 821048, overlap 821038 821048 GTTCAGTAGAGGTAA TATTAAAACCCA-CCTT AAAT AAGGATGGGTTTTAATA TATTCTTATTTCATT TERM 1055 821048 - 821068 + T 74 -6.2 -4.45723 | gap 1, opp_overlap 821040 821048, overlap 821040 821038 GAGGTAATATTAAAA CCCA-CCTT AAAT AAGGATGGG TTTTAATATATTCTT TERM 1056 821068 - 821048 - T 74 -6.2 -4.43681 | gap 1, opp_overlap 821048 821040 821038, overlap 821040 GAGGTAATATTAAAA CCCA-CCTT AAAT AAGGATGGG TTTTAATATATTCTT lysS 822572 - 821082 - | lysyl-tRNA synthetase SAK_0877 822747 - 823649 + | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein TERM 1057 823687 - 823650 - T 100 -14.5 -3.51137 | opp_overlap 823655, overlap 823655 823658 AAGTATGCTAGATAA TTAAATAATCCACTAGA TGAA TCTAGTGGATTATTTTA GTGTGTCATTTTGAC TERM 1058 823655 - 823682 + T 100 -14.4 -4.4084 | opp_overlap 823650 823655 823658 TGCTAGATAATTAAA TAATCCACTAGA TGAA TCTAGTGGATTA TTTTAGTGTGTCATT TERM 1059 823682 - 823655 - T 100 -14.4 -4.04174 | opp_overlap 823655, overlap 823650 823658 TGCTAGATAATTAAA TAATCCACTAGA TGAA TCTAGTGGATTA TTTTAGTGTGTCATT TERM 1060 823679 - 823658 - T 100 -11.7 -4.13903 | opp_overlap 823655, overlap 823655 823650 TAGATAATTAAATAA TCCACTAGA TGAA TCTAGTGGA TTATTTTAGTGTGTC SAK_0878 824326 - 823685 - | phosphoglycerate mutase family protein SAK_0879 824821 - 824348 - | YbaK/EbsC family protein TERM 1061 824565 - 824579 + g 73 -2.1 -5.33405 | TGGAGATCTTTTTGA GGTAT CATTT GTACC TTTTTGTTTCCTGAA SAK_0880 825116 - 825733 + | hypothetical protein TERM 1062 825741 - 825768 + T 79 -10 -2.95595 | opp_overlap 825746, overlap 825746 ATAAATAGTTTATCA AAAAAGCTACTG TTAA CAGTAGCTTTTA CTCTTTTACTTTTCC TERM 1063 825746 - 825763 + T 93 -9.9 -4.56729 | opp_overlap 825746, overlap 825741 TAGTTTATCAAAAAA GCTACTG TTAA CAGTAGC TTTTACTCTTTTACT TERM 1064 825763 - 825746 - T 100 -9.9 -5.15634 | opp_overlap 825746 825741 TAGTTTATCAAAAAA GCTACTG TTAA CAGTAGC TTTTACTCTTTTACT SAK_0881 826614 - 825766 - | glycosy hydrolase family protein SAK_0882 826771 - 827295 + | hypothetical protein TERM 1065 827649 - 827629 - g 73 -6.3 -4.50298 | TAAAGTTAAAAAGAA TGACAAAAT TGA ATTTTATCA GGAAGTTTACAAAAA SAK_0883 827279 - 827668 + | putative lipoprotein TERM 1066 827711 - 827666 - T 100 -15.1 -5.27923 | opp_overlap 827677 GAAGTTTACAAAAAA TAAGATAAAAACAAGTTGGAG ATAT CTCCAACTTGTTTTTATGTTT TTGAAAGGCTGTAGT TERM 1067 827677 - 827700 + T 100 -14 -5.36364 | opp_overlap 827666 AAAATAAGATAAAAA CAAGTTGGAG ATAT CTCCAACTTG TTTTTATGTTTTTGA pepF 829526 - 827727 - | oligoendopeptidase F TERM 1068 830048 - 830031 - g 78 -5.7 -5.00765 | opp_overlap 830034 AATTAATTATAAAAA TAATCTT AACC AAGATTA CCTAGGAAAGTTATC TERM 1069 830330 - 830320 - g 74 -4 -5.24531 | ATTCGCGAGAAAAAA TTGA AAG TCAA AAATGAGATAACCAA TERM 1070 831568 - 831556 - g 76 -7.7 -4.05033 | TGGACTCTATATAAA GCTCA AAA TGAGC TAACAAAAATAGGTG ppc 829735 - 832530 + | phosphoenolpyruvate carboxylase TERM 1071 832541 - 832563 + F 71 -5.6 -4.62054 | opp_overlap 832541 GTTAATATTGATAGA GGGAGGAT CATTGCT ATTCTCCC TTTTACTTTACTTCG SAK_0886 832636 - 833904 + | cell cycle protein FtsW TERM 1072 833912 - 833945 + F 100 -12.7 -5.12707 | opp_overlap 833914 833920, overlap 833914 833920 TTAAATAATCATCCA AACAAAAATCGAGAT TTTT ATCTCGATTTTTGTA TTTTTTGAAATTTAA TERM 1073 833914 - 833943 + F 100 -15.3 -4.18259 | opp_overlap 833914 833920, overlap 833912 833920 AAATAATCATCCAAA CAAAAATCGAGAT TTTT ATCTCGATTTTTG TATTTTTTGAAATTT TERM 1074 833943 - 833914 - f 100 -15.3 -3.74658 | opp_overlap 833912 833914 833920, overlap 833920 AAATAATCATCCAAA CAAAAATCGAGAT TTTT ATCTCGATTTTTG TATTTTTTGAAATTT TERM 1075 833920 - 833937 + F 100 -8.5 -5.41787 | opp_overlap 833920 833914, overlap 833914 833912 TCATCCAAACAAAAA TCGAGAT TTTT ATCTCGA TTTTTGTATTTTTTG TERM 1076 833937 - 833920 - f 95 -8.5 -5.30616 | opp_overlap 833914 833912 833920, overlap 833914 TCATCCAAACAAAAA TCGAGAT TTTT ATCTCGA TTTTTGTATTTTTTG tuf 834256 - 835452 + | elongation factor Tu TERM 1077 835509 - 835524 + F 95 -9 -5.25893 | opp_overlap 835511 AGCTCAAATTGTGAA GAGTCC TCAG GGACTC TTTTTTAGTATCTAT TERM 1078 835988 - 835972 - g 77 -3 -5.5353 | overlap 835965 GATATCAACAAAAAA GCAAAA GCTAT CTTTGC TAATGGTTTGACTCC tpiA 835633 - 836391 + | triosephosphate isomerase TERM 1079 836409 - 836433 + F 93 -9.3 -4.79352 | opp_overlap 836409 CACATGATATCTAAA GGCATAGCACT CTA GGTGATATGCC TTTTCTTATAGATAG TERM 1080 836433 - 836409 - f 77 -8.6 -3.73414 | opp_overlap 836409 CACATGATATCTAAA GGCATAGCAC TCTAG GTGATATGCC TTTTCTTATAGATAG gpmA 836568 - 837260 + | phosphoglyceromutase TERM 1081 837270 - 837311 + F 100 -13.5 -3.97406 | gap 1, opp_overlap 837281, overlap 837281 AAATAATCTAATCTT TATATAAAAAATTCAGGCCA AGT TGGCTTGAATTTTTTAT-TA TTTATAACATTTTGA TERM 1082 837281 - 837301 + F 100 -10.5 -5.74288 | opp_overlap 837281, overlap 837270 TCTTTATATAAAAAA TTCAGGCCA AGT TGGCTTGAA TTTTTTATTATTTAT TERM 1083 837301 - 837281 - f 100 -8.3 -5.36441 | opp_overlap 837281 837270 TCTTTATATAAAAAA TTCAGGCCA AGT TGGCTTGAA TTTTTTATTATTTAT TERM 1084 837448 - 837466 + G 86 -4.6 -5.70522 | opp_overlap 837438 AAATGCTAGCATACC TAGACGAT TAA ATCTTCTA TTTTTTATTATTGTT TERM 1085 837895 - 837883 - g 72 -7.7 -3.71645 | AACCGTATATGCAAA TGCAG TTG CTGCA GTTCCAGTGAGCGCT TERM 1086 838202 - 838184 - g 74 -3.8 -5.10077 | AAATATTTGAAAAAA GGCTATTC ACT GAATGACC GAGTGGGAACTTCTT TERM 1087 838416 - 838431 + G 73 -5.4 -4.56775 | ATGGCAGTGAATTAT CTAGTG GACG CGCTAG TTTTTCCGAAGGGAT SAK_0890 837389 - 839434 + | penicillin-binding protein 2b recR 839449 - 840045 + | recombination protein RecR TERM 1088 840056 - 840084 + F 100 -11.9 -4.15565 | opp_overlap 840056, overlap 840062 TATAATTGTTATAAA GAAAAGGTTGGGA ATC TCCTAACTTTTTC TTTTACAATACTAAC TERM 1089 840084 - 840056 - f 74 -7.5 -3.90328 | opp_overlap 840056 840062 TATAATTGTTATAAA GAAAAGGTTGGGA ATC TCCTAACTTTTTC TTTTACAATACTAAC TERM 1090 840062 - 840078 + F 100 -7.3 -5.46706 | opp_overlap 840056, overlap 840056 TGTTATAAAGAAAAG GTTGGGA ATC TCCTAAC TTTTTCTTTTACAAT TERM 1091 841038 - 841048 + G 75 -5.4 -4.85782 | GGGGCTTGTGGTTTA TCAC GCT GTGA TTTCTTTTTGACGAA ddl 840186 - 841232 + | D-alanyl-alanine synthetase A TERM 1092 841226 - 841274 + F 86 -11.4 -2.93633 | opp_overlap 841237 841239, overlap 841237 841269 ACGTGAGAGTCATTT AATTTAAAAAAGTTCAACTAAG TCTTT CTTAGTTGAGCTTTTTCAAATC TATGATATGTTATGA TERM 1093 841263 - 841237 - f 93 -8.1 -5.16572 | opp_overlap 841237 841226, overlap 841239 ATTTAATTTAAAAAA GTTCAACTAAG TCTTT CTTAGTTGAGC TTTTTCAAATCTATG TERM 1094 841237 - 841263 + F 95 -10.3 -4.65838 | opp_overlap 841237 841239, overlap 841226 ATTTAATTTAAAAAA GTTCAACTAAG TCTTT CTTAGTTGAGC TTTTTCAAATCTATG TERM 1095 841261 - 841239 - f 73 -9.3 -2.80592 | opp_overlap 841237 841226, overlap 841237 TTAATTTAAAAAAGT TCAACTAAG TCTTT CTTAGTTGA GCTTTTTCAAATCTA murF 841379 - 842746 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 1096 842754 - 842777 + F 100 -12.6 -6.04324 | opp_overlap 842752 842767 TAGGATAATAGAGGT GTTAGGGTAA CAAG TTACCCTAAC TTTTTTGTTTTTTAA TERM 1097 843231 - 843251 + G 81 -9.1 -4.08216 | overlap 843221 CTCAGCAGTTATGGT TACTGTATG TTG CATACGGTA TTTTAGGAGGAATCG SAK_0894 842933 - 844153 + | major facilitator family transporter TERM 1098 844172 - 844192 + F 100 -9.1 -5.63517 | opp_overlap 844172 844173, overlap 844173 ATATCTAATTTAAAA TTCTTTGGT TTT ACCAAAGAG TTTTTTCTTTGAAAA TERM 1099 844192 - 844172 - f 74 -6.9 -4.29176 | opp_overlap 844172 844173, overlap 844173 ATATCTAATTTAAAA TTCTTTGGT TTT ACCAAAGAG TTTTTTCTTTGAAAA TERM 1100 844173 - 844191 + F 91 -10.4 -3.97026 | opp_overlap 844172 844173, overlap 844172 TATCTAATTTAAAAT TCTTTGGT TTT ACCAAAGA GTTTTTTCTTTGAAA TERM 1101 844191 - 844173 - f 83 -10.4 -3.16783 | opp_overlap 844173 844172, overlap 844172 TATCTAATTTAAAAT TCTTTGGT TTT ACCAAAGA GTTTTTTCTTTGAAA SAK_0895 844282 - 844968 + | hypothetical protein TERM 1102 844986 - 845023 + F 95 -8.7 -5.18355 | opp_overlap 844988, overlap 844988 ATTTTAATATTATTA TATTATCTAGCTATTAA AAAA TAAATAGCTGGATAATG TTTTTCATTTTTAGC TERM 1103 844988 - 845021 + F 88 -9.1 -4.20007 | opp_overlap 844988, overlap 844986 TTTAATATTATTATA TTATCTAGCTATTAA AAAA TAAATAGCTGGATAA TGTTTTTCATTTTTA SAK_0896 845147 - 846685 + | cell wall surface anchor family protein TERM 1104 846693 - 846724 + F 83 -8 -4.20367 | opp_overlap 846698, overlap 846695 CAAAATAATTTATTT TAGAAGCTTGGGTC TTTA GACACAGGCTTCTC TTCTTTCTTCGGAAA TERM 1105 846695 - 846722 + F 87 -10.6 -3.69841 | opp_overlap 846698, overlap 846693 AAATAATTTATTTTA GAAGCTTGGGTC TTTA GACACAGGCTTC TCTTCTTTCTTCGGA TERM 1106 848161 - 848173 + G 76 -6.3 -4.60487 | GGTGCTGTGGGTCAA CTTCA GTT TGAAG TTTTTAAACATCGTA prfC 846862 - 848406 + | peptide chain release factor 3 TERM 1107 848440 - 848409 - f 80 -7.4 -4.55016 | opp_overlap 848408 848415, overlap 848415 AGAAAAAATGTAAAA TTTAAAGTCACTCA AATT TGAGTGACTTTTTA AGTTTTTTAGACTAA TERM 1108 848415 - 848434 + F 100 -10.8 -4.95854 | opp_overlap 848409 848415, overlap 848408 AATGTAAAATTTAAA GTCACTCA AATT TGAGTGAC TTTTTAAGTTTTTTA TERM 1109 848434 - 848415 - f 90 -10.8 -3.94333 | opp_overlap 848415 848408, overlap 848409 AATGTAAAATTTAAA GTCACTCA AATT TGAGTGAC TTTTTAAGTTTTTTA SAK_0898 848492 - 848872 + | hypothetical protein TERM 1110 848884 - 848903 + F 88 -7.2 -5.09259 | ATAAACAATTTAGCA GTAGTGAT TTTT ATCACTGC TTTTATTTTGAAGTA SAK_0899 848993 - 849727 + | amino acid ABC transporter, ATP-binding protein, putative SAK_0900 849720 - 850382 + | amino acid ABC transporter, permease protein, putative TERM 1111 851160 - 851145 - g 83 -6.2 -5.19275 | overlap 851158 AGTGATAAAATAAAA GTACTT AAAG AAGTAC TAACAAGTAAAGAGA SAK_0901 850398 - 851228 + | ABC transporter, substrate-binding protein TERM 1112 851245 - 851268 + F 88 -6.6 -5.17507 | opp_overlap 851245 TAGATAAACTATGAA CCCTCCTTCT TTAT AGATGGTGGG TTTTTATTGCCTTTT TERM 1113 851660 - 851650 - g 72 -4 -4.90525 | CAACTTTAAATAAAA TTCA TAC TGAA GATAATACTATCCAA TERM 1114 852829 - 852786 - g 76 -6 -4.65168 | opp_overlap 852801 ATCACACGTGAAAAA CCATTACCATTTAAACCATC AGGT GGTGGCTTTAAAGGTAAAGG TGGACGAGGCAATGG TERM 1115 853005 - 852995 - g 78 -5.4 -4.90296 | AAAACCTCATAAAAA CACT TCA AGTG AAAAACAAACTGGAT SAK_0902 851463 - 853049 + | DEAD-box ATP dependent DNA helicase TERM 1116 853065 - 853083 + T 100 -11 -6.07374 | opp_overlap 853065 GAGGATTATGAAAAA GGAGTTGC TGA GCGACTCC TTTTTTATTTTTTGT TERM 1117 853083 - 853065 - T 93 -8.8 -4.78107 | opp_overlap 853065 GAGGATTATGAAAAA GGAGTTGC TGA GCGACTCC TTTTTTATTTTTTGT SAK_0903 853500 - 853234 - | GIY-YIG domain-containing protein SAK_0904 854257 - 853493 - | hypothetical protein TERM 1118 853922 - 853905 - G 77 -8.5 -3.8901 | TTGCAAAGCATTAAA TCAACGT TTGA ACGTTGA ACATGATCAAGAAGA SAK_0905 854392 - 855132 + | acyltransferase family protein TERM 1119 855147 - 855168 + F 100 -8.9 -5.85011 | opp_overlap 855147 AGGGTTACATGGAAA CTATTTACT TTTT AGTAAATAG TTTTTTTGGTTTTTA TERM 1120 855168 - 855147 - f 80 -8.9 -3.7108 | opp_overlap 855147 AGGGTTACATGGAAA CTATTTACT TTTT AGTAAATAG TTTTTTTGGTTTTTA SAK_0906 855232 - 855885 + | ComE operon protein 1, putative SAK_0907 855869 - 858106 + | DNA internalization-related competence protein ComEC/Rec2 SAK_0908 858232 - 859041 + | Cof-like hydrolase family protein SAK_0909 859052 - 859996 + | LacI family sugar-binding transcriptional regulator TERM 1121 860020 - 860047 + T 100 -7.8 -5.34309 | opp_overlap 860020 AAGTAATAGAAAAAA GGTTTCCAACTA AACT TGATTGGAAACC TTTTTATTTAATGAT TERM 1122 860047 - 860020 - T 100 -7.8 -5.50925 | opp_overlap 860020 AAGTAATAGAAAAAA GGTTTCCAACTA AACT TGATTGGAAACC TTTTTATTTAATGAT SAK_0910 861047 - 860055 - | hypothetical protein TERM 1123 860290 - 860304 + g 74 -3.6 -5.22039 | AGAGGACTAACTTGA GGATTT TTA AAATTC TTTTTTCCATTTGCC SAK_0911 861223 - 861951 + | hypothetical protein holA 862005 - 863042 + | DNA polymerase III subunit delta TERM 1124 863480 - 863464 - g 72 -8 -3.66803 | TTTGAAGACTTTAAA GCTGCT TTCAC AGCAGC AGCAACAGGACGTTT sodA 863122 - 863730 + | superoxide dismutase, Mn TERM 1125 863728 - 863764 + F 78 -9.8 -3.33737 | gap 1, opp_overlap 863708 863738, overlap 863731 863738 CAAGCTGCTAAAGCT TAATAAAA-AACGAGTC GATA GGCTCGTTTTTTTATTA TTCTAAAAGTTGATA TERM 1126 863731 - 863761 + F 72 -7.1 -3.8062 | gap 1, opp_overlap 863708 863738, overlap 863728 863738 GCTGCTAAAGCTTAA TAAAA-AACGAGTC GATA GGCTCGTTTTTTTA TTATTCTAAAAGTTG TERM 1127 863753 - 863738 - f 81 -4.6 -5.4756 | opp_overlap 863731 863728 863738 AAGCTTAATAAAAAA CGAGTC GATA GGCTCG TTTTTTTATTATTCT TERM 1128 863738 - 863753 + F 100 -6.8 -5.97979 | opp_overlap 863738, overlap 863731 863728 AAGCTTAATAAAAAA CGAGTC GATA GGCTCG TTTTTTTATTATTCT SAK_0914 864068 - 864919 + | BglG family transcriptional antiterminator bglF 864912 - 866780 + | PTS system, beta-glucoside-specific IIABC component SAK_0916 866797 - 868224 + | glycosy hydrolase family protein TERM 1129 868254 - 868298 + T 100 -11.7 -3.89881 | opp_overlap 868266, overlap 868266 AGTCTCTGTTTCAAT TTAATATAAAAAGGAGTATCC ATA GGTTACTCCTTTTTATTATAA TTTATGAAGGTTAAT TERM 1130 868286 - 868266 - T 100 -9.7 -5.1167 | opp_overlap 868254 868266 AATTTAATATAAAAA GGAGTATCC ATA GGTTACTCC TTTTTATTATAATTT TERM 1131 868266 - 868286 + T 100 -9.7 -5.25772 | opp_overlap 868266, overlap 868254 AATTTAATATAAAAA GGAGTATCC ATA GGTTACTCC TTTTTATTATAATTT SAK_0917 869387 - 868293 - | hypothetical protein SAK_0918 869554 - 870696 + | glycerate kinase SAK_0919 870721 - 871977 + | GntP family permease SAK_0920 872078 - 873142 + | hypothetical protein TERM 1132 873154 - 873208 + T 100 -13.3 -4.48823 | opp_overlap 873154 873169, overlap 873169 873197 TTAGAAATAAATCTA TCAAAATAATAAAAACCTCTTAGAT TAACT ATCTAAGAGGTTTTTATAAATGTGA TTTTATAACTTGGTT TERM 1133 873208 - 873154 - T 100 -13.3 -2.82776 | opp_overlap 873154 873169 873197, overlap 873169 TTAGAAATAAATCTA TCAAAATAATAAAAACCTCTTAGAT TAACT ATCTAAGAGGTTTTTATAAATGTGA TTTTATAACTTGGTT TERM 1134 873169 - 873193 + T 100 -11.6 -4.89852 | opp_overlap 873169 873154, overlap 873154 TCAAAATAATAAAAA CCTCTTAGAT TAACT ATCTAAGAGG TTTTTATAAATGTGA TERM 1135 873193 - 873169 - T 100 -11.6 -5.4593 | opp_overlap 873154 873169, overlap 873154 TCAAAATAATAAAAA CCTCTTAGAT TAACT ATCTAAGAGG TTTTTATAAATGTGA SAK_0921 873640 - 873197 - | MarR family transcriptional regulator queA 874749 - 873721 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1136 874216 - 874234 + g 70 -3 -5.10933 | opp_overlap 874206, overlap 874206 ATGGAGACCGGCTGT TGGTGCAG CAG CAGAACCA TTTTCTTTTGCATAC TERM 1137 874818 - 874864 + H 86 -11.4 -2.68755 | overlap 874814 874829 GACCCAACTAATCTT TTTATTTAGAATGATTATAA AAAATAA TTGTAATCATTCTAAATAAG TGATATAATAATTGT SAK_0923 874902 - 875582 + | hypothetical protein TERM 1138 875596 - 875629 + F 72 -3.3 -5.1417 | AAAATATTAATCGTG GAGTTATTGTCTA AACTAGAA TGGACAGTAATTC TTTTTAGTTTTATAA TERM 1139 875715 - 875674 - f 72 -4.7 -4.87665 | gap 1, opp_overlap 875675 TTTTATTGACAAAAA TTGGTATATACCAT-ATAAT ATA ATCATAAAGGTCTATACCAA ATAAAAGGAGAGTAA TERM 1140 875807 - 875776 - g 76 -6 -4.58395 | TTGAGGGGGGAAAAA TTGCATTTACTCTT TTAG AAGAGAAAATGAAA GCTGGTGCTCAAACT nagB 875733 - 876434 + | glucosamine-6-phosphate isomerase TERM 1141 876451 - 876488 + T 74 -2.2 -5.59534 | opp_overlap 876451 876462 GTAAATAATAAAAAA GTAAGGATGAATCT CAATGAGAAA AAATTCATTCTTAC TTTTTTATTATGCTT TERM 1142 876488 - 876451 - T 81 -2.9 -5.72254 | opp_overlap 876451, overlap 876462 GTAAATAATAAAAAA GTAAGGATGAATCTC AATGAGAA AAAATTCATTCTTAC TTTTTTATTATGCTT SAK_0925 877462 - 876506 - | glutathione S-transferase domain-containing protein SAK_0926 877558 - 878277 + | RNA pseudouridine synthase family protein TERM 1143 878412 - 878439 + G 75 -8.6 -3.59984 | opp_overlap 878420, overlap 878427 CTTTTTGATGTCTCA TTTAGCAATTGC TCCT GCAATTCCTAAA TTGTATGCCTTTTAC SAK_0927 878350 - 879501 + | major facilitator family protein TERM 1144 879528 - 879499 - f 100 -9.5 -5.05153 | opp_overlap 879505, overlap 879505 ATGTCAAAAAATAAA TAAAAAGTTATCC GAAA GGATAACTTTTTT CGAATAGTAAAAGTA TERM 1145 879505 - 879522 + F 95 -8.5 -5.06451 | opp_overlap 879505 879499 AAAAATAAATAAAAA GTTATCC GAAA GGATAAC TTTTTTCGAATAGTA TERM 1146 879522 - 879505 - f 100 -8.5 -5.63012 | opp_overlap 879505, overlap 879499 AAAAATAAATAAAAA GTTATCC GAAA GGATAAC TTTTTTCGAATAGTA SAK_0928 879553 - 880500 + | competence protein CoiA, putative TERM 1147 881836 - 881826 - g 70 -3.2 -5.00846 | overlap 881820 TAAAGATGATAAAAA TCGC TTT GCAA TTCTCAATCATTATT pepB 880516 - 882321 + | group B oligopeptidase PepB TERM 1148 882349 - 882365 + F 90 -8 -4.78107 | opp_overlap 882349 GCTATTGAAGTAAAA CCAGTC AACTA GACTGG TTTTTGATAGTGATC TERM 1149 882365 - 882349 - f 85 -8 -4.43477 | opp_overlap 882349 GCTATTGAAGTAAAA CCAGTC AACTA GACTGG TTTTTGATAGTGATC SAK_0930 882516 - 883142 + | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein SAK_0931 883252 - 883923 + | O-methyltransferase family protein prsA 883984 - 884913 + | foldase protein PrsA SAK_0933 885155 - 885640 + | hypothetical protein TERM 1150 887934 - 887924 - g 91 -6.8 -5.28942 | opp_overlap 887924 887922 887925 887927, overlap 887925 887928 GAGCTTAAAGAAAAA GCAG CAG CTGC AGCAGCTGGTGATGT TERM 1151 887945 - 887925 - g 84 -9.7 -3.76281 | opp_overlap 887924 887922 887925 887927, overlap 887924 887928 AGCTTAAAGAAAAAG CAGCAGCTG CAG CAGCTGGTG ATGTCTTTAAAGATA TERM 1152 887925 - 887945 + G 73 -9.7 -2.54801 | opp_overlap 887924 887925 887928, overlap 887924 887922 887927 AGCTTAAAGAAAAAG CAGCAGCTG CAG CAGCTGGTG ATGTCTTTAAAGATA TERM 1153 887942 - 887928 - g 74 -10 -2.65994 | opp_overlap 887927 887925 887924 887922, overlap 887924 887925 TTAAAGAAAAAGCAG CAGCTG CAG CAGCTG GTGATGTCTTTAAAG alaS 885656 - 888274 + | alanyl-tRNA synthetase TERM 1154 888343 - 888306 - f 80 -5.7 -4.9448 | gap 1, opp_overlap 888310 888314 888317, overlap 888308 888310 AGTTAGTAAATAAAA CAGACAAAGG-GCAGAAC ATC GTTCTGTTCCTTTGTGTA TATAGGAGAAATATG TERM 1155 888339 - 888310 - f 77 -8.7 -3.62235 | gap 1, opp_overlap 888310 888314 888317, overlap 888308 888306 AGTAAATAAAACAGA CAAAGG-GCAGAAC ATC GTTCTGTTCCTTTG TGTATATAGGAGAAA TERM 1156 888310 - 888339 + F 84 -10.9 -2.98823 | gap 1, opp_overlap 888310 888308 888306, overlap 888314 888317 AGTAAATAAAACAGA CAAAGGG-CAGAAC ATC GTTCTGTTCCTTTG TGTATATAGGAGAAA TERM 1157 888317 - 888331 + F 77 -8.6 -3.68084 | opp_overlap 888310 888308 888306, overlap 888314 888310 AAAACAGACAAAGGG CAGAAC ATC GTTCTG TTCCTTTGTGTATAT SAK_0935 888356 - 889072 + | hypothetical protein TERM 1158 889080 - 889101 + F 91 -7.4 -5.27938 | opp_overlap 889075 889080 TTATATAAAAGATAA CCAAGTTT TAACTC AAACTTGG TTTTTCTTTAGACAT TERM 1159 889101 - 889080 - f 74 -7.4 -4.05861 | opp_overlap 889080, overlap 889075 TTATATAAAAGATAA CCAAGTTT TAACTC AAACTTGG TTTTTCTTTAGACAT TERM 1160 889379 - 889344 - g 78 -9.1 -3.69395 | GCTATCATCCAATAA TTGTAGGTACCGAAG TATTTG CTCAGGCACCTACAA CTGATCGCTATCCAG SAK_0936 889160 - 889978 + | glycosyl transferase family protein TERM 1161 889990 - 890016 + F 93 -6.8 -5.44721 | opp_overlap 889989 889990 TTGAAGATTTAAAAG GTTACTAAAT TATTTCT ATTTAGTAAC TTTTTTTGGGGTGAT SAK_0937 890399 - 890692 + | hypothetical protein SAK_0938 890737 - 890952 + | DNA-binding protein SAK_0939 890955 - 891713 + | hypothetical protein TERM 1162 891791 - 891757 - T 100 -11 -4.16279 | opp_overlap 891757, overlap 891762 TATATTAGTGTAAAA TAAAAGGATTGATTCT CTG AAAATCAGTCCTTTTA TTTTTTCTATTTCTT TERM 1163 891757 - 891791 + T 100 -11 -5.61913 | opp_overlap 891757 891762 TATATTAGTGTAAAA TAAAAGGATTGATTCT CTG AAAATCAGTCCTTTTA TTTTTTCTATTTCTT TERM 1164 891786 - 891762 - T 82 -6.5 -5.09259 | opp_overlap 891757, overlap 891757 TAGTGTAAAATAAAA GGATTGATTCT CTG AAAATCAGTCC TTTTATTTTTTCTAT SAK_0940 892361 - 891798 - | hypothetical protein TERM 1165 892356 - 892405 + g 70 -6.8 -4.1043 | gap 1, opp_overlap 892368, overlap 892351 892365 892368 AGTGTTGTTATTTTT TGACATAAAAAATCTCCTTTTTT TATAC AGCAAAGGAGATTCTTT-TGTCA TTTGTCATGTTTAAC TERM 1166 892394 - 892368 - H 72 -2.4 -5.36441 | opp_overlap 892368 892365 892356 TTTTGACATAAAAAA TCTCCTTT TTTTATACAGC AAAGGAGA TTCTTTTGTCATTTG TERM 1167 892595 - 892579 - H 88 -7.3 -4.98857 | opp_overlap 892579 ATTTAACTAGAAAAA GACACTA AAT CAGTGTC TTTCAGATTGAAGAC TERM 1168 892641 - 892614 - H 76 -7.1 -4.22678 | opp_overlap 892614 CAGATTGAAGACAAA GTCCTTAGACA TTCACT TTTCTAAGGAC TTTTCTGTTTGTCTA TERM 1169 892614 - 892641 + H 86 -7.1 -4.87328 | opp_overlap 892614 CAGATTGAAGACAAA GTCCTTAGACA TTCACT TTTCTAAGGAC TTTTCTGTTTGTCTA TERM 1170 894127 - 894099 - g 100 -8.9 -5.17488 | opp_overlap 894099 894105, overlap 894116 AATAGTAAAAGAAAA GACAAGCTGGATT AAC ATTCCAGTTTGTC TTCAATCTGAAAGAC TERM 1171 894099 - 894127 + G 80 -11.1 -3.12351 | opp_overlap 894099 894116, overlap 894105 AATAGTAAAAGAAAA GACAAGCTGGATT AAC ATTCCAGTTTGTC TTCAATCTGAAAGAC SAK_0941 892696 - 894147 + | ISSag8, transposase TERM 1172 894156 - 894140 - T 70 -7.3 -3.66178 | opp_overlap 894140 GTCTTCAATCTGAAA GACACTA AAT CAGTGTC TTTTTCTTATAATCC TERM 1173 894140 - 894156 + T 88 -6.6 -5.22006 | opp_overlap 894140 GTCTTCAATCTGAAA GACACT AAATC AGTGTC TTTTTCTTATAATCC nrdF 895122 - 894163 - | ribonucleotide-diphosphate reductase subunit beta TERM 1174 894231 - 894213 - G 79 -10.4 -3.18681 | opp_overlap 894193 894216 CTTCAACGCTACCAA GTAGGTAA CCA TTACCTAC TTGAGAGAAGAAGTC TERM 1175 894661 - 894673 + g 100 -9.1 -5.40072 | opp_overlap 894672 GAAAGTTTCGAGGTA GGTGG AAG CCACC TTTTTTTGAAGGGCA TERM 1176 895272 - 895290 + r 83 -10.4 -3.07856 | opp_overlap 895272, overlap 895267 GATAACATCATGAAA CTGAGATA GTT TATCTCAG TCTAGTTTCTGATGT TERM 1177 895290 - 895272 - R 89 -10.4 -3.8572 | opp_overlap 895272 895267 GATAACATCATGAAA CTGAGATA GTT TATCTCAG TCTAGTTTCTGATGT SAK_0943 897484 - 895325 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1178 897548 - 897517 - R 100 -17.6 -4.79752 | opp_overlap 897514 897527 CTTAACAATACAAAA TGGGAATAAAGCAA TTAA TTGCTTTATTCCCA GACTCTAATTTGCTT SAK_0944 897786 - 897562 - | glutaredoxin-like protein NrdH TERM 1179 897867 - 897845 - H 79 -8.6 -3.84648 | GAATGGAAAAAGCAA GTGTTTTATT TCT AACAAAACAC AATATATAGTGTCTT TERM 1180 897867 - 897908 + H 70 -3.9 -5.10029 | opp_overlap 897867 897872, overlap 897872 ATTTCTAACAAAACA CAATATATAGTGTCTTA AAATAAAA TGAGACACTATATTTCG TTTTTTAGGGTTAGT TERM 1181 897872 - 897903 + H 78 -6.8 -4.42765 | opp_overlap 897872 897867, overlap 897867 TAACAAAACACAATA TATAGTGTCTTA AAATAAAA TGAGACACTATA TTTCGTTTTTTAGGG ptsH 898169 - 898432 + | phosphocarrier protein HPr ptsI 898437 - 900170 + | phosphoenolpyruvate-protein phosphotransferase TERM 1182 900184 - 900205 + F 100 -8.1 -5.45652 | opp_overlap 900184 GAGAATAATAAAAAA GTAGGGATT AAAA AATCTCTAC TTTTTTATTGAAAGT TERM 1183 900205 - 900184 - f 90 -5.9 -5.68489 | opp_overlap 900184 GAGAATAATAAAAAA GTAGGGATT AAAA AATCTCTAC TTTTTTATTGAAAGT TERM 1184 900310 - 900292 - f 72 -6 -4.40601 | AAGTGATAGAATAAA CCTATTAC AAT GTAAAAGG AGATTTACTTTGACA gapN 900320 - 901747 + | glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent TERM 1185 901787 - 901750 - f 100 -13.7 -2.58959 | opp_overlap 901756, overlap 901756 TGATATGAAATAGAC GTAAAACGACTCAACTA TTGT CAGTTGAGTCGTTTTAT AAACCTCTTTTACAT TERM 1186 901756 - 901781 + F 100 -12 -4.39828 | opp_overlap 901750 901756 GAAATAGACGTAAAA CGACTCAACT ATTGTC AGTTGAGTCG TTTTATAAACCTCTT TERM 1187 901781 - 901756 - f 100 -12.7 -4.29981 | opp_overlap 901756, overlap 901750 GAAATAGACGTAAAA CGACTCAACTA TTGT CAGTTGAGTCG TTTTATAAACCTCTT TERM 1188 901934 - 901948 + G 86 -6.4 -5.18355 | overlap 901935 AATTATTATAGCGAT TCTTGC TTG GCAAGG TTTTTCGTTTTTGAA TERM 1189 901935 - 901947 + G 72 -7.7 -3.69386 | overlap 901934 ATTATTATAGCGATT CTTGC TTG GCAAG GTTTTTCGTTTTTGA TERM 1190 902001 - 901980 - g 86 -6.7 -5.22481 | overlap 901971 901981 CATAAAGAAATAAAA CTTCAACAA GCTG TTGTTGAAA AAGAAATTCGCATAG TERM 1191 902000 - 901981 - g 72 -8 -3.71049 | overlap 901971 901980 ATAAAGAAATAAAAC TTCAACAA GCTG TTGTTGAA AAAGAAATTCGCATA SAK_0948 901887 - 903140 + | polysaccharide deacetylase family protein TERM 1192 903149 - 903167 + T 100 -10.4 -6.09196 | opp_overlap 903149 GCCTTAATAAAAAAA GAAACAAG TTA CTTGTTTC TTTTTTTATTTTAAA TERM 1193 903167 - 903149 - T 100 -10.4 -5.7946 | opp_overlap 903149 GCCTTAATAAAAAAA GAAACAAG TTA CTTGTTTC TTTTTTTATTTTAAA SAK_0949 904255 - 903173 - | DEAD-box ATP dependent DNA helicase udk 904400 - 905029 + | uridine kinase TERM 1194 905053 - 905022 - f 72 -9 -2.71497 | opp_overlap 905027, overlap 905027 905031 GCATCTTAAATGAAG CAAAATAAACACAA TGGT TTGTGTTTATTTTT TTGTTTTATATAGGA TERM 1195 905048 - 905027 - f 89 -8.9 -4.5287 | opp_overlap 905027, overlap 905022 905031 TTAAATGAAGCAAAA TAAACACAA TGGT TTGTGTTTA TTTTTTTGTTTTATA TERM 1196 905027 - 905048 + F 100 -8.9 -6.14618 | opp_overlap 905027 905022 905031 TTAAATGAAGCAAAA TAAACACAA TGGT TTGTGTTTA TTTTTTTGTTTTATA TERM 1197 905044 - 905031 - f 74 -5.3 -4.78981 | opp_overlap 905027, overlap 905027 905022 ATGAAGCAAAATAAA CACAA TGGT TTGTG TTTATTTTTTTGTTT SAK_0951 905116 - 905613 + | GAF domain-containing protein TERM 1198 906046 - 906060 + G 76 -4.3 -5.0916 | opp_overlap 906056 AAACACTTGAAGAGC CAACA GAAAA TGTTG TTTTTATATTAGCAA TERM 1199 906775 - 906755 - g 70 -2.6 -5.08011 | gap 1, overlap 906744 AAAATCGTTAAAAAA CGAAATGAG CCAA CTC-TCTCG AGCAGATCAAAGTTC dnaX 905613 - 907277 + | DNA polymerase III subunits gamma and tau TERM 1200 907314 - 907292 - T 100 -15 -4.90917 | opp_overlap 907292 AAACGTAACTAAAAA TAGTTGCCTG TTA CAGGCAACTA TTTTTTTGATAAGTT TERM 1201 907292 - 907314 + T 100 -15 -5.54894 | opp_overlap 907292 AAACGTAACTAAAAA TAGTTGCCTG TTA CAGGCAACTA TTTTTTTGATAAGTT SAK_0953 908476 - 907541 - | biotin--protein ligase metK 908661 - 909857 + | S-adenosylmethionine synthetase TERM 1202 909864 - 909883 + F 100 -10.8 -5.55664 | opp_overlap 909864 AGCAAATAATAAAAA GCGTAAAC GAAA GTTTACGC TTTTTTTGCTCATGA TERM 1203 909883 - 909864 - f 100 -10.8 -5.39905 | opp_overlap 909864 AGCAAATAATAAAAA GCGTAAAC GAAA GTTTACGC TTTTTTTGCTCATGA SAK_0955 910378 - 912639 + | hypothetical protein SAK_0956 912706 - 913251 + | hypothetical protein TERM 1204 913330 - 913280 - f 91 -12.3 -3.38603 | gap 1, opp_overlap 913285 913287 913292, overlap 913285 913287 913292 AAACATTCCTAAATA TAAGACA-TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTACTGTTTTA AATAGCTTTCTGATC TERM 1205 913325 - 913285 - f 91 -12.2 -3.49232 | gap 1, opp_overlap 913285 913287 913292, overlap 913280 913287 913292 TTCCTAAATATAAGA CA-TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTACTG TTTTAAATAGCTTTC TERM 1206 913285 - 913325 + F 100 -14.4 -4.22346 | gap 1, opp_overlap 913285 913280 913287 913292, overlap 913287 913292 TTCCTAAATATAAGA CA-TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTACTG TTTTAAATAGCTTTC TERM 1207 913322 - 913287 - f 100 -15 -3.31428 | opp_overlap 913285 913287 913292, overlap 913285 913280 913292 CCTAAATATAAGACA TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTA CTGTTTTAAATAGCT TERM 1208 913287 - 913322 + F 100 -17.2 -2.81476 | opp_overlap 913287 913285 913280 913292, overlap 913285 913292 CCTAAATATAAGACA TAAAACCCTACTCATT GATT AGTGAGTAGGGTTTTA CTGTTTTAAATAGCT TERM 1209 913317 - 913292 - f 95 -10.5 -4.72127 | opp_overlap 913287 913285 913292, overlap 913287 913285 913280 ATATAAGACATAAAA CCCTACTCATT GATT AGTGAGTAGGG TTTTACTGTTTTAAA TERM 1210 913292 - 913317 + F 100 -12.7 -4.55826 | opp_overlap 913292 913287 913285 913280, overlap 913287 913285 ATATAAGACATAAAA CCCTACTCATT GATT AGTGAGTAGGG TTTTACTGTTTTAAA SAK_0957 913411 - 913539 + | hypothetical protein TERM 1211 913562 - 913583 + F 100 -7.3 -5.55769 | opp_overlap 913562 TAATCAGATAATAAA CTCCGTTTG CTTG CAGATGGAG TTTTTTGTTGTCAAA TERM 1212 913586 - 913599 + F 77 -3.9 -5.3236 | overlap 913595 CTTGCAGATGGAGTT TTTTG TTGT CAAAA TTTTTTGTAGGTTGT SAK_0958 913647 - 914213 + | hypothetical protein SAK_0959 914210 - 914764 + | hypothetical protein TERM 1213 915383 - 915396 + G 70 -5.3 -4.53636 | TGGTTGGAAAAACGG TTGAC AAGG GTCAA TTTTGATTATATGCT SAK_0960 914768 - 916054 + | ABC transporter, ATP-binding protein SAK_0961 916042 - 916710 + | hypothetical protein SAK_0962 916794 - 917474 + | TENA/THI-4 family protein thiD 917476 - 918273 + | phosphomethylpyrimidine kinase TERM 1214 918851 - 918864 + G 71 -4.5 -4.75219 | GGATGTCTATTAGGG GCAGT ATTG GCTGC TTTTATTGGTAGTTC thiM 918275 - 919045 + | hydroxyethylthiazole kinase TERM 1215 919229 - 919213 - g 73 -2.3 -5.29385 | AAGGTAAGGAAAAAA TTGCT ATGGCTA AGCAA CTCCAAATACTTTGT thiE 919059 - 919730 + | thiamine-phosphate pyrophosphorylase TERM 1216 920973 - 920983 + G 70 -6.8 -4.00868 | overlap 920969 GCGACAGATTTGCGT GCAG GCG CTGC TTTAGTTATCGCTGG murA 919857 - 921116 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1217 921130 - 921152 + F 89 -7.8 -5.06116 | opp_overlap 921130 AGTATATATAACAAA GAGTTGAGAA TAT TTCTTAGCTC TTTTCTTCTTGTTTT SAK_0967 921200 - 921772 + | acetyltransferase SAK_0968 921765 - 923048 + | DRTGG domain/CBS domain-containing protein map 923071 - 923931 + | methionine aminopeptidase SAK_0970 923933 - 924853 + | ribonuclease BN, putative TERM 1218 924849 - 924890 + T 82 -9.7 -3.57144 | opp_overlap 924851 924854 924859, overlap 924851 924859 AATCCAAAGAAGAAA AATAAGAAAAGACAGCTCT TGTT AGAGTTGTCTTTTTTTGTC TTTAAAAATAACAAA TERM 1219 924888 - 924851 - T 86 -5.7 -5.38549 | opp_overlap 924851 924849 924859, overlap 924854 924859 TCCAAAGAAGAAAAA TAAGAAAAGACAGCTCT TGTT AGAGTTGTCTTTTTTTG TCTTTAAAAATAACA TERM 1220 924851 - 924888 + T 90 -12.3 -3.36515 | opp_overlap 924851 924854 924859, overlap 924849 924859 TCCAAAGAAGAAAAA TAAGAAAAGACAGCTCT TGTT AGAGTTGTCTTTTTTTG TCTTTAAAAATAACA TERM 1221 924885 - 924854 - T 86 -7.4 -4.74161 | opp_overlap 924851 924849 924859, overlap 924851 924859 AAAGAAGAAAAATAA GAAAAGACAGCTCT TGTT AGAGTTGTCTTTTT TTGTCTTTAAAAATA TERM 1222 924859 - 924880 + T 100 -9.5 -5.88197 | opp_overlap 924854 924851 924859, overlap 924851 924849 AGAAAAATAAGAAAA GACAGCTCT TGTT AGAGTTGTC TTTTTTTGTCTTTAA TERM 1223 924880 - 924859 - T 91 -7.3 -5.18715 | opp_overlap 924859 924851 924849, overlap 924854 924851 AGAAAAATAAGAAAA GACAGCTCT TGTT AGAGTTGTC TTTTTTTGTCTTTAA SAK_0971 925325 - 924870 - | GtrA family protein SAK_0972 925507 - 926016 + | hypothetical protein TERM 1224 926029 - 926049 + F 79 -3.3 -5.67283 | gap 1, opp_overlap 926029, overlap 926032 TAAATATATTATAAA GCGCGAGA CATTGA TCTCG-GC TTTTTTGTTTGGGTT TERM 1225 927276 - 927257 - g 73 -7.2 -4.03234 | gap 1 GTTGTTGTATACAAA GCAGGGGAT ATC ATCCC-TGC AGTCTTAAATGTCGT TERM 1226 927682 - 927692 + G 88 -8.2 -4.63486 | opp_overlap 927682 TCATGTGGGAAGCAA GGCG AGC CGCC TTTTATTGGAGGAAT TERM 1227 927692 - 927682 - g 70 -8.2 -3.34344 | opp_overlap 927682 TCATGTGGGAAGCAA GGCG AGC CGCC TTTTATTGGAGGAAT ligA 926156 - 928114 + | NAD-dependent DNA ligase LigA SAK_0974 928126 - 929145 + | putative lipid kinase TERM 1228 930682 - 930670 - g 84 -4.9 -5.25805 | AATAAAGCTAAAAAA GATAA TGC TTATC AGATGCCTGGAATTG pulA 929149 - 931449 + | pullulanase, type I TERM 1229 931487 - 931430 - f 100 -14.8 -2.71011 | gap 2, opp_overlap 931430 931430 931440 931440 931447, overlap 931447 AGCTTTCTGTAATGA TCCTTGATAT-CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTGTATATTAAGGA ATTTGATTTGAATTT TERM 1230 931430 - 931487 + F 100 -17 -3.06283 | gap 2, opp_overlap 931430 931447, overlap 931430 931440 931440 931447 AGCTTTCTGTAATGA TCCTTGATAT-CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTGTATATTAAGGA ATTTGATTTGAATTT TERM 1231 931430 - 931488 + F 93 -11 -4.12279 | gap 3, opp_overlap 931430 931447, overlap 931430 931440 931440 931447 AGCTTTCTGTAATGA -TCCTTGATAT-CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTGTATATTAAGGAA TTTGATTTGAATTTG TERM 1232 931440 - 931476 + F 100 -13.4 -3.08088 | gap 1, opp_overlap 931430 931447, overlap 931440 931430 931430 931447 AATGATCCTTGATAT CACAAAA-TAACCTGAA AACA TTCAGGTTATTTTTGTG TATATTAAGGAATTT TERM 1233 931440 - 931474 + F 84 -11.1 -3.09452 | gap 1, opp_overlap 931430 931447, overlap 931430 931430 931440 931447 AATGATCCTTGATAT CACAAAATAACCTGAA AACA TTCAGGTTATTTT-TG TGTATATTAAGGAAT TERM 1234 931468 - 931447 - f 95 -10.3 -4.50976 | opp_overlap 931447 931440 931440 931430 931430, overlap 931430 CTTGATATCACAAAA TAACCTGAA AACA TTCAGGTTA TTTTTGTGTATATTA TERM 1235 931447 - 931468 + F 100 -10.3 -5.09685 | opp_overlap 931430 931447, overlap 931440 931440 931430 931430 CTTGATATCACAAAA TAACCTGAA AACA TTCAGGTTA TTTTTGTGTATATTA TERM 1236 931571 - 931588 + F 87 -5.6 -5.63504 | CAGATGCGTCTGTAT GAGGAA AATGTA TTCCTC TTTTTTTGTACCATT glgB 931655 - 933523 + | glycogen branching enzyme glgC 933565 - 934704 + | glucose-1-phosphate adenylyltransferase TERM 1237 935124 - 935104 - g 76 -10.5 -2.63991 | overlap 935103 935123 CTTAAGTCAAGTAAT CCACTTGCA TAA TGCAAATGG TGCGCAAGCCACCGT glgD 934694 - 935827 + | glucose-1-phosphate adenylyltransferase, GlgD subunit TERM 1238 935986 - 935974 - g 78 -6.3 -4.80882 | ATGGTAGACCAAAAA TTTGG AGA CCAAA TAGAAAACCTCATGT TERM 1239 936081 - 936095 + G 73 -5.8 -4.52873 | TGTTACGTTCTACTT TATTGA TAA TCAATA TTATTTTTATAGAGG glgA 935824 - 937254 + | glycogen synthase TERM 1240 937724 - 937703 - g 74 -8.1 -3.75461 | opp_overlap 937692, overlap 937692 GAAATGTTTAGCAAA CTGCAAACA TTGA TGTTTACAG GTGTGGCCTTCATTG atpE 937586 - 937786 + | F0F1 ATP synthase subunit C atpB 937819 - 938535 + | F0F1 ATP synthase subunit A atpF 938553 - 939050 + | F0F1 ATP synthase subunit B TERM 1241 939142 - 939123 - g 76 -5.8 -4.68724 | CCATTGAACATAAAA TTGTTGAA AAAA TCCAACAA GAAGTAGCAGCTTTA TERM 1242 939431 - 939413 - g 71 -9 -3.28712 | opp_overlap 939412 939410 GCTTTGTCTCCAGAA CAAAAAGA ACG TCTTTTTG ATATTGCTAAAACTA atpH 939050 - 939586 + | F0F1 ATP synthase subunit delta TERM 1243 940007 - 939993 - g 80 -10 -3.60296 | opp_overlap 939993 CACGCCCAGTTGAAA CACCAG CAC CTGGTG TTATGCAACGTAAAT TERM 1244 939993 - 940007 + G 78 -10 -3.30243 | opp_overlap 939993 CACGCCCAGTTGAAA CACCAG CAC CTGGTG TTATGCAACGTAAAT atpA 939602 - 941107 + | F0F1 ATP synthase subunit alpha TERM 1245 941197 - 941214 + G 74 -9.9 -2.6072 | GATTACTAGTGCGAT GCAGATG GTCT CATCTGC TAAGTTGGTTAAATC atpG 941123 - 942004 + | F0F1 ATP synthase subunit gamma atpD 942078 - 943484 + | F0F1 ATP synthase subunit beta atpC 943497 - 943910 + | F0F1 ATP synthase subunit epsilon TERM 1246 943918 - 943945 + F 95 -8.6 -5.24989 | opp_overlap 943918 943917 AAAAGTAGAAAAATG GTCTAATTAGTT TTGT GACTAATTAGGC TTTTTTAGTGTATAA TERM 1247 944133 - 944150 + G 76 -2 -5.45652 | GATAAGTATAGTTGG TGGCTA TGTGGT TAGTCA TTTTTTATTGGAAGT SAK_0988 943969 - 944205 + | hypothetical protein murA 944268 - 945539 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SAK_0990 945541 - 945732 + | hypothetical protein TERM 1248 945739 - 945768 + F 79 -8.1 -4.06903 | gap 1, opp_overlap 945739 945738 GGAAAATAGAAAGAG CCACTATAAGTTAT TTG ATG-CTTATAGTGG TTTCCTTTGAGAGTT TERM 1249 946161 - 946151 - g 70 -5.4 -4.38369 | TAATGAAATAAAGAA GGTT AAT AACC AAATTGTTCCGACTA endA 945807 - 946664 + | DNA-entry nuclease TERM 1250 946877 - 946912 + F 95 -5.3 -6.34616 | AAAACGGATGGTACC GCGTGTCAACGCTCC GATTAA GGGGTAGTGGCACGC TTTTTTTTGTTTTCA TERM 1251 946998 - 946980 - g 72 -7.5 -3.70826 | CAAAAACAATTAGAA GAGTTGA AAATA TCAACTC AAGAAAAGCTTAAAG pheS 946956 - 947996 + | phenylalanyl-tRNA synthetase subunit alpha SAK_0993 948079 - 948600 + | acetyltransferase pheT 948654 - 951059 + | phenylalanyl-tRNA synthetase subunit beta TERM 1252 951123 - 951081 - T 100 -11.8 -4.59773 | gap 1, opp_overlap 951092, overlap 951064 951092 TTTTACGTTGAAAAA TAAATAAAAA-ACAGCATC AATTAA GATGCTGTTTTTTTATTTA AAATTTATAGATGTT TERM 1253 951111 - 951092 - T 100 -7.9 -5.88476 | opp_overlap 951092, overlap 951081 AAAATAAATAAAAAA CAGCATC AATTAA GATGCTG TTTTTTTATTTAAAA TERM 1254 951092 - 951111 + T 100 -7.9 -5.95539 | opp_overlap 951081 951092 AAAATAAATAAAAAA CAGCATC AATTAA GATGCTG TTTTTTTATTTAAAA SAK_0995 952030 - 951128 - | hypothetical protein TERM 1255 951983 - 952005 + g 90 -7 -5.11063 | ACCTCCGCTACTGGA GCGACGATCT TCA ACATTGTCGC TTTTTCTTAGGTCAT TERM 1256 952531 - 952545 + G 70 -8.6 -2.95668 | overlap 952530 AGTTTTTGGACGATT GAAGCA AGA TGCTTC CTTTATCAGTCAATT rexB 952208 - 955441 + | exonuclease RexB TERM 1257 955927 - 955892 - g 70 -2.7 -5.1523 | gap 1, opp_overlap 955892 955895, overlap 955895 955899 TTTACAAGATAAAAA TGAGCA-AGACGTCAT AAAGA ATGAGGTCTATGCTGA TTTATTTTCTGACTA TERM 1258 957402 - 957412 + G 70 -3.2 -4.91511 | ATTGCTATTCAGGAT GTCA AAA TGGC TTTTTATCATAAAGT rexA 955431 - 959054 + | exonuclease RexA SAK_0998 959067 - 959984 + | CorA family metal ion transporter TERM 1259 959988 - 960011 + T 100 -14 -5.96894 | opp_overlap 959988 TTAAGAAAATAAAAA TATTCGGTGC TTAC GCACCGAATA TTTTTTTATTTACCT TERM 1260 960011 - 959988 - T 100 -14 -5.62288 | opp_overlap 959988 TTAAGAAAATAAAAA TATTCGGTGC TTAC GCACCGAATA TTTTTTTATTTACCT trmE 961393 - 960017 - | tRNA modification GTPase TrmE TERM 1261 960283 - 960299 + g 74 -5.1 -4.73108 | overlap 960285 TATCGTTAATACGTT CTTCGAT TTT ATCGATG TTTTCATTTTCTAAA TERM 1262 962395 - 962382 - g 77 -8.1 -3.84246 | GCTTCAACCACTAAA CGAGC ACAA GCTCG TCGTAAACAATTAGA SAK_1000 961521 - 963431 + | ABC transporter, ATP-binding protein SAK_1001 963581 - 964549 + | acetoin dehydrogenase, TPP-dependent, E1 component, alpha subunit, putative TERM 1263 965555 - 965523 - g 71 -8.6 -3.14878 | gap 1 TCTTGCAAGTGAAGA TGTTCCAGTAC-CGT ATTC ACGTGTACTTGAACA AGGAATCTTACCTGA SAK_1002 964624 - 965622 + | acetoin dehydrogenase, TPP-dependent, E1 component, beta subunit, putative SAK_1003 965749 - 967137 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1264 967462 - 967431 - g 78 -10.2 -3.34962 | overlap 967434 GCCTATATCGGAGAA GAAGGTGAAGAAGT AGGT ACGTCATCACCTTC AGCTGATGCAACTAT TERM 1265 968233 - 968221 - g 70 -2.7 -5.11033 | overlap 968222 TAGAACTTCAAAAAA TCCTT GCT AAGAA GGGAATGAAGATTAA SAK_1004 967197 - 968954 + | acetoin dehydrogenase, TPP-dependent, E3 component, dihydrolipoamide dehydrogenase, putative TERM 1266 968972 - 968999 + F 80 -7.9 -4.18802 | gap 1 TTGTTTAATATATTT GAGATTG-AGCT TTTAT AGCTTCAATCTC TTTTCACGTATATAT lplA 969052 - 970041 + | lipoate-protein ligase A TERM 1267 970080 - 970052 - T 81 -4.5 -5.48054 | opp_overlap 970052 970053, overlap 970053 ACTAAAATCAAAAAA TCTAGTCAAAGTC TTC GCCTTTGGCTAGG TTTTTTGTATGGTTA TERM 1268 970052 - 970080 + T 100 -8.9 -5.42131 | opp_overlap 970052 970053, overlap 970053 ACTAAAATCAAAAAA TCTAGTCAAAGTC TTC GCCTTTGGCTAGG TTTTTTGTATGGTTA TERM 1269 970079 - 970053 - T 77 -8 -3.86392 | opp_overlap 970052 970053, overlap 970052 CTAAAATCAAAAAAT CTAGTCAAAGTC TTC GCCTTTGGCTAG GTTTTTTGTATGGTT TERM 1270 970053 - 970079 + T 87 -10.2 -3.83652 | opp_overlap 970053 970052, overlap 970052 CTAAAATCAAAAAAT CTAGTCAAAGTC TTC GCCTTTGGCTAG GTTTTTTGTATGGTT TERM 1271 970139 - 970120 - T 100 -7.2 -5.56568 | opp_overlap 970120 970123 ATAGTAGTAAAAAAA CAACGTTA TTGA TAACGCTG GTTTTTATATTATTC SAK_1006 970934 - 970149 - | glutamine amidotransferase domain-containing protein TERM 1272 970792 - 970770 - G 70 -8.6 -2.94032 | opp_overlap 970770 970769, overlap 970769 970774 970779 ATCTTCTAATGAAAC GATATCAAAT GTC ATTTGACATC CTAGTTTTTCTCCCA SAK_1007 972277 - 970934 - | mur ligase family protein SAK_1008 972417 - 973268 + | hypothetical protein TERM 1273 973608 - 973592 - g 70 -8.7 -3.05358 | ACAAATATGAAACCA GGGACTC ACA AAGTCCC ACTAAAGGTAGTAAA SAK_1009 973271 - 974230 + | hypothetical protein glmM 974284 - 975636 + | phosphoglucosamine mutase SAK_1011 975759 - 976130 + | hypothetical protein SAK_1012 976155 - 976535 + | hypothetical protein TERM 1274 976555 - 976526 - f 79 -8.1 -4.06419 | opp_overlap 976528 976533, overlap 976528 976533 CCTTCCTATAAATAA GATAAAATAGAGA TTTA TCTCTATTTTATT TTGGAATAAAAAGCT TERM 1275 976528 - 976553 + F 91 -10.7 -4.13767 | opp_overlap 976526 976528 976533, overlap 976533 TTCCTATAAATAAGA TAAAATAGAGA TTTA TCTCTATTTTA TTTTGGAATAAAAAG TERM 1276 976553 - 976528 - f 87 -10.7 -3.62695 | opp_overlap 976528 976533, overlap 976526 976533 TTCCTATAAATAAGA TAAAATAGAGA TTTA TCTCTATTTTA TTTTGGAATAAAAAG TERM 1277 976533 - 976548 + F 82 -6.2 -5.09259 | opp_overlap 976528 976526 976533, overlap 976528 ATAAATAAGATAAAA TAGAGA TTTA TCTCTA TTTTATTTTGGAATA TERM 1278 976548 - 976533 - f 80 -6.2 -4.86029 | opp_overlap 976533 976528, overlap 976528 976526 ATAAATAAGATAAAA TAGAGA TTTA TCTCTA TTTTATTTTGGAATA SAK_1013 976627 - 977757 + | coproporphyrinogen III oxidase TERM 1279 977895 - 977905 + G 73 -5.4 -4.58395 | AAAATTAGGAATAGG CGAT GAC ATCG TTTTTAAAAGATACG SAK_1014 977761 - 978498 + | thioesterase SAK_1015 978499 - 979269 + | HAD family hydrolase SAK_1016 979244 - 979915 + | hypothetical protein TERM 1280 979891 - 979938 + F 100 -8.8 -5.67063 | gap 1, opp_overlap 979897 979902, overlap 979892 979897 AAAATTAAGAAAATA TA-AAAACAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTGTTTGCTA TTTTTTTATAATACA TERM 1281 979892 - 979936 + F 91 -9.5 -4.47611 | opp_overlap 979897 979902, overlap 979891 979897 AAATTAAGAAAATAT AAAAACAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTGTTTGC TATTTTTTTATAATA TERM 1282 979931 - 979897 - f 100 -11.6 -5.34632 | opp_overlap 979897 979892 979891, overlap 979902 AAGAAAATATAAAAA CAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTG TTTGCTATTTTTTTA TERM 1283 979897 - 979931 + F 100 -13.8 -4.22283 | opp_overlap 979897 979902, overlap 979892 979891 AAGAAAATATAAAAA CAAAATGCAAGCCTTA TAA TAGCGCTTGCATTTTG TTTGCTATTTTTTTA TERM 1284 979926 - 979902 - f 86 -5.7 -5.40873 | opp_overlap 979897 979892 979891, overlap 979897 AATATAAAAACAAAA TGCAAGCCTTA TAA TAGCGCTTGCA TTTTGTTTGCTATTT TERM 1285 980008 - 979994 - f 100 -11.4 -5.42131 | opp_overlap 979991 979994 CAATGACATAAAAAA GCACCG AAT CGGTGC TCACTTTTTCAAGCT TERM 1286 979994 - 980008 + F 86 -11.4 -2.84171 | opp_overlap 979994, overlap 979991 CAATGACATAAAAAA GCACCG AAT CGGTGC TCACTTTTTCAAGCT TERM 1287 981503 - 981483 - g 72 -4.1 -5.00884 | overlap 981470 981496 ATTTTCTTGAAAAAA TCAAGAA TGAAGAT TTCTTGA GAAAACAAAGGACCT TERM 1288 981521 - 981509 - g 73 -6.3 -4.3739 | GATTTCTTGAGAAAA CAAAG GAC CTTTG ATAATGGCTCAATTC SAK_1017 980303 - 984415 + | hypothetical protein cas1 984417 - 985286 + | CRISPR-associated Cas1 family protein SAK_1019 985283 - 985624 + | CRISPR-associated Cas2 family protein SAK_1020 985611 - 986276 + | hypothetical protein TERM 1289 987011 - 987025 + F 79 -10 -2.808 | opp_overlap 987010 987009, overlap 987000 GGTTCCAAAACAAGT GCCACA GTT TGTGGC TGATTGGATTGGTTT TERM 1290 987392 - 987416 + F 100 -10.1 -5.58179 | TGTGCTGTTATTATG CTAGGACATCA TTG TGGTGTTCTAG TTTTTTGTTATACTG TERM 1291 987863 - 987879 + F 88 -7.3 -5.0538 | opp_overlap 987863 TATTAATATAGTTAA GGAGTGT CCA ATACTCC TTTTTTGAAATACAG ndk 987960 - 988376 + | nucleoside diphosphate kinase lepA 988512 - 990344 + | GTP-binding protein LepA TERM 1292 990378 - 990403 + F 84 -5.6 -5.42975 | gap 1, opp_overlap 990378 TTTATCTATTTTAAA GTAACTT-AGC TTCGT GCTTAAGTTAC TTTTTCTTTGTCTGC TERM 1293 990775 - 990761 - f 71 -2.1 -5.33866 | overlap 990762 GAAAGTCATAAAAAA CGCAA GGGTG TTGCA GGGGTTGACTTTCCA SAK_1023 991064 - 993223 + | leucine-rich repeat-containing protein TERM 1294 993276 - 993244 - f 74 -9.3 -3.12856 | opp_overlap 993249 993269 993270, overlap 993249 TACAGAGCTAATATA TAAAATCCTTCAAGA ATT TCTTGGAGGATTTTG CATTTATATGCTAAA TERM 1295 993249 - 993271 + F 100 -11.4 -4.41177 | opp_overlap 993244 993249, overlap 993269 993270 AGCTAATATATAAAA TCCTTCAAGA ATT TCTTGGAGGA TTTTGCATTTATATG TERM 1296 993271 - 993249 - f 90 -9.2 -4.68545 | opp_overlap 993249 993269 993270, overlap 993244 AGCTAATATATAAAA TCCTTCAAGA ATT TCTTGGAGGA TTTTGCATTTATATG TERM 1297 993269 - 993294 + F 72 -3.3 -5.20328 | opp_overlap 993249 993244, overlap 993249 993270 993288 CAAGAATTTCTTGGA GGATTTTGCAT TTAT ATGCTAAATCA TTTATTTTTTTAGAA TERM 1298 993288 - 993298 + F 72 -2.6 -5.41746 | overlap 993270 993269 TTTGCATTTATATGC TAAA TCA TTTA TTTTTTTAGAAAATT SAK_1024 993347 - 993982 + | HD domain-containing protein TERM 1299 994386 - 994397 + G 71 -4.4 -4.84017 | opp_overlap 994386 TTGGAATGATAATCA GAGA GCGG TCTC TTTTTATGAAAAATT SAK_1025 993991 - 994455 + | acetyltransferase msrB 994455 - 994889 + | methionine sulfoxide reductase B TERM 1300 994890 - 994928 + F 86 -11.3 -2.94099 | opp_overlap 994893 994895 994897, overlap 994897 TCACTTTTTGATTAA TAAGAGACGACTTAAGG GTATA TCTTAAGTCGTTTTTTA TGTATGGTAAAAAGA TERM 1301 994897 - 994921 + F 100 -9.4 -5.43414 | opp_overlap 994895 994893 994897, overlap 994890 TTGATTAATAAGAGA CGACTTAAGG GTATA TCTTAAGTCG TTTTTTATGTATGGT TERM 1302 994921 - 994897 - f 74 -8.7 -3.29142 | opp_overlap 994897 994890, overlap 994895 994893 TTGATTAATAAGAGA CGACTTAAG GGTATAT CTTAAGTCG TTTTTTATGTATGGT TERM 1303 995782 - 995765 - g 78 -4.1 -5.42265 | TGAAATCAGAAAAAA GCCCTCT TCAA AGAGAAC TTGATCGGTTGACCA TERM 1304 997233 - 997247 + G 71 -4.3 -4.84642 | overlap 997242 TCCGTCGGCATTCTT CCTTT TTTCT AAAGG TTTTATTCCTTTACC SAK_1027 995041 - 997833 + | cation transporter HAD ATPase SAK_1028 997833 - 998936 + | hypothetical protein TERM 1305 998988 - 999041 + T 100 -24.5 -3.77607 | opp_overlap 998988 999002, overlap 999002 AATAAACTAGCAAAA TAGCACACTAAAAATACTACTCA TATTATGC TGAGTAGTATTTTTAGTGTGCTA TTTGATGAAGTTATT TERM 1306 999041 - 998988 - T 100 -24.5 -4.41897 | opp_overlap 998988 999002, overlap 999002 AATAAACTAGCAAAA TAGCACACTAAAAATACTACTCA TATTATGC TGAGTAGTATTTTTAGTGTGCTA TTTGATGAAGTTATT TERM 1307 999027 - 999002 - T 80 -6.3 -4.83269 | opp_overlap 999002 998988, overlap 998988 ATAGCACACTAAAAA TACTACTCA TATTATGC TGAGTAGTA TTTTTAGTGTGCTAT TERM 1308 999002 - 999027 + T 80 -6.3 -4.83269 | opp_overlap 998988 999002, overlap 998988 ATAGCACACTAAAAA TACTACTCA TATTATGC TGAGTAGTA TTTTTAGTGTGCTAT SAK_1029 999695 - 999057 - | hexapaptide repeat-containing transferase TERM 1309 999941 - 999904 - H 100 -20.3 -4.70887 | opp_overlap 999904 999906 999908 999915 GTATGAACAAAGAAA CATACTTAAAACCTTGT AATA ACAAGGTTTTAAGTATG TATAGTAAGTTATGG TERM 1310 999904 - 999941 + H 100 -20.3 -2.83905 | opp_overlap 999904, overlap 999906 999908 999915 GTATGAACAAAGAAA CATACTTAAAACCTTGT AATA ACAAGGTTTTAAGTATG TATAGTAAGTTATGG TERM 1311 999906 - 999939 + H 100 -17.1 -2.96538 | opp_overlap 999904, overlap 999904 999908 999915 ATGAACAAAGAAACA TACTTAAAACCTTGT AATA ACAAGGTTTTAAGTA TGTATAGTAAGTTAT TERM 1312 999908 - 999937 + H 100 -15.3 -3.03214 | opp_overlap 999904, overlap 999906 999904 999915 GAACAAAGAAACATA CTTAAAACCTTGT AATA ACAAGGTTTTAAG TATGTATAGTAAGTT TERM 1313 999915 - 999930 + H 80 -7.6 -4.27259 | opp_overlap 999904, overlap 999908 999906 999904 GAAACATACTTAAAA CCTTGT AATA ACAAGG TTTTAAGTATGTATA TERM 1314 1000712 - 1000724 + G 76 -3.3 -5.30155 | ATTGGGATTATCATC GGAAG TGT CATCC TTTTTTGGTTAGTCA SAK_1031 1000406 - 1001017 + | hypothetical protein TERM 1315 1001029 - 1001050 + T 100 -9.5 -5.28561 | opp_overlap 1001029 1001031 TTAAAAATAAAAAAA GGTTGGAGA TATA TCTCCAATC TTTTTATTGTATATT TERM 1316 1001050 - 1001029 - T 100 -7.3 -6.20267 | opp_overlap 1001029, overlap 1001031 TTAAAAATAAAAAAA GGTTGGAGA TATA TCTCCAATC TTTTTATTGTATATT TERM 1317 1001048 - 1001031 - T 72 -8.5 -3.1344 | opp_overlap 1001029, overlap 1001029 AAAAATAAAAAAAGG TTGGAGA TATA TCTCCAA TCTTTTTATTGTATA SAK_1032 1001836 - 1001054 - | hypothetical protein TERM 1318 1001492 - 1001482 - G 70 -2.6 -5.24416 | TAATGACAATAAAAA TATT AAA AATA CTCCAAAGAAGAGAA SAK_1033 1002546 - 1001848 - | ABC transporter, ATP-binding protein SAK_1034 1002915 - 1002547 - | GntR family transcriptional regulator TERM 1319 1003384 - 1003429 + G 75 -9.2 -3.1706 | gap 1, opp_overlap 1003387, overlap 1003387 CTAAATTTATTGACA GAACATCTTGA-AGGGGTGCA ATTGA TTCTTCCCTATCAAGATGTTC TTGATCAGCTCAATT TERM 1320 1004939 - 1004963 + G 70 -8.6 -2.98823 | opp_overlap 1004943, overlap 1004949 CAGGTTTTACGCTAG GCAAGTCTGA TTTGC TCAGACGTGC TATGTCTAAGAAAAA TERM 1321 1005721 - 1005711 - g 73 -5.4 -4.68103 | opp_overlap 1005711 TCAAGTTCAAGAAAA TAGC GAA GCTA CTATTTTAGTTCAGC dnaE 1003060 - 1006164 + | DNA polymerase III DnaE pfkA 1006245 - 1007267 + | 6-phosphofructokinase pyk 1007316 - 1008818 + | pyruvate kinase TERM 1322 1008833 - 1008863 + F 100 -10.7 -5.53079 | opp_overlap 1008833 ATTTTTGAATTCAAA CCTATTATTTAAG AATAC CTTAAATAATGGG TTTTTTATATGTTTT TERM 1323 1008863 - 1008833 - f 80 -9.2 -3.75332 | opp_overlap 1008833 ATTTTTGAATTCAAA CCTATTATTTAAGA ATA CCTTAAATAATGGG TTTTTTATATGTTTT lepB 1008989 - 1009546 + | signal peptidase I TERM 1324 1009552 - 1009575 + T 95 -9 -5.00895 | opp_overlap 1009552 TTCAGAGTAGTAAAA GAATGGTATT ATTT GATACCATTC TTTTTATGTAATAAA TERM 1325 1009575 - 1009552 - T 83 -8.3 -4.33274 | opp_overlap 1009552 TTCAGAGTAGTAAAA GAATGGTAT TATTTG ATACCATTC TTTTTATGTAATAAA SAK_1039 1009703 - 1009560 - | hypothetical protein glmS 1009815 - 1011629 + | D-fructose-6-phosphate amidotransferase TERM 1326 1011687 - 1011710 + F 93 -9 -4.90906 | opp_overlap 1011687, overlap 1011708 AAAAATTGTAAAAAA GCCTATTTTT GAAG GAAAATAGGC TTTTTCCTATTGTCA TERM 1327 1011710 - 1011687 - f 93 -8.3 -5.16472 | opp_overlap 1011687 1011708 AAAAATTGTAAAAAA GCCTATTTT TGAAGG AAAATAGGC TTTTTCCTATTGTCA phnA 1011792 - 1012121 + | PhnA protein TERM 1328 1012129 - 1012150 + F 93 -9.5 -4.71061 | AAAAATAGCTTTCAG GCAATTGGC AACG GTCAATTGC TTTTTGAATATGACT SAK_1042 1012256 - 1012897 + | polar amino acid ABC transporter permease TERM 1329 1012966 - 1012949 - g 81 -7.1 -4.59773 | TGCTATGGGCAAAAA GAAATCT TTAA AGATTTC AATCTGACTGTAGAA SAK_1043 1012907 - 1013536 + | polar amino acid ABC transporter ATP-binding protein SAK_1044 1013550 - 1014383 + | polar amino acid ABC transporter amino acid-binding protein TERM 1330 1014414 - 1014378 - T 100 -19.1 -3.83502 | opp_overlap 1014381 1014386, overlap 1014381 1014386 GATGTTTATAGTAAA GAATAAAAGACTAGGAA TTT CTCCTAGTCTTTTATTC TACGAAAAAATTAAA TERM 1331 1014411 - 1014381 - T 100 -15 -4.04806 | opp_overlap 1014381 1014386, overlap 1014378 1014386 GTTTATAGTAAAGAA TAAAAGACTAGGAA TTT CTCCTAGTCTTTTA TTCTACGAAAAAATT TERM 1332 1014381 - 1014411 + T 100 -14.3 -3.29043 | opp_overlap 1014378 1014381 1014386, overlap 1014386 GTTTATAGTAAAGAA TAAAAGACTAGGA ATTTC TCCTAGTCTTTTA TTCTACGAAAAAATT TERM 1333 1014406 - 1014386 - T 100 -10.5 -5.02606 | opp_overlap 1014386 1014381, overlap 1014381 1014378 TAGTAAAGAATAAAA GACTAGGAA TTT CTCCTAGTC TTTTATTCTACGAAA TERM 1334 1014386 - 1014406 + T 100 -9.8 -4.77165 | opp_overlap 1014381 1014378 1014386, overlap 1014381 TAGTAAAGAATAAAA GACTAGGA ATTTC TCCTAGTC TTTTATTCTACGAAA TERM 1335 1014460 - 1014430 - T 88 -8.5 -4.45175 | opp_overlap 1014432 1014437 1014458, overlap 1014437 TACGAAAAAATTAAA TAAAAAACATCGA TATAT CCGATGTTTTCTA GGTTAATTAACCAAG TERM 1336 1014453 - 1014437 - T 87 -4.4 -5.74086 | opp_overlap 1014432 1014437, overlap 1014430 AAATTAAATAAAAAA CATCGA TATAT CCGATG TTTTCTAGGTTAATT TERM 1337 1014483 - 1014508 + T 79 -6.8 -4.63044 | TAACCAAGTTTAGTT GCAAGACGTG CTTTAT CGCGGCTTGC TTTGTTTGTGTGAAT rpsT 1014700 - 1014467 - | 30S ribosomal protein S20 coaA 1015689 - 1014769 - | pantothenate kinase TERM 1338 1015197 - 1015207 + g 70 -6.8 -4.13973 | AAATTGGGATTTTCG CGGT TAT ACCG TTCTTTATAGTATCT TERM 1339 1016101 - 1016091 - g 73 -3.2 -5.11063 | ATTAGCTAAGAAAAA TGCA ACA CGCA ATGGAGTAGTAGTTG SAK_1047 1015795 - 1016385 + | methyltransferase domain-containing protein cdd 1016711 - 1017100 + | cytidine deaminase TERM 1340 1017131 - 1017143 + F 75 -4.9 -5.01732 | opp_overlap 1017126, overlap 1017118 CTTTTAAGCATTTAG CTTAA ATA TTAAG TTTTTTAGGAGGGTT SAK_1049 1017165 - 1018214 + | Bmp family membrane protein TERM 1341 1018262 - 1018227 - f 100 -14.4 -3.65201 | gap 1, opp_overlap 1018238, overlap 1018228 1018238 TAATATCTTTAAGAA CTTTCAAAAAAGCGATT AGA AATCGCTTTTTTGAA-G CTGAGATAAACTTAT TERM 1342 1018262 - 1018228 - f 100 -14.6 -2.78639 | opp_overlap 1018238, overlap 1018227 1018238 AATATCTTTAAGAAC TTTCAAAAAAGCGATT AGA AATCGCTTTTTTGAAG CTGAGATAAACTTAT TERM 1343 1018252 - 1018238 - f 95 -8.6 -5.06103 | opp_overlap 1018238, overlap 1018227 1018228 AGAACTTTCAAAAAA GCGATT AGA AATCGC TTTTTTGAAGCTGAG TERM 1344 1018238 - 1018252 + F 95 -8.6 -5.03314 | opp_overlap 1018238 1018227 1018228 AGAACTTTCAAAAAA GCGATT AGA AATCGC TTTTTTGAAGCTGAG TERM 1345 1018331 - 1018273 - f 91 -10.7 -4.06491 | gap 1, opp_overlap 1018274 1018290, overlap 1018274 1018290 TGAAGCTGAGATAAA CTTATATCTCAGTAAAATCCATCAGTCG TTAA CGATTGGTGGATTTTACTGAACTATAA- ATGAATTTTTCTGAA TERM 1346 1018331 - 1018274 - f 100 -16.7 -3.03412 | opp_overlap 1018274 1018290, overlap 1018273 1018290 GAAGCTGAGATAAAC TTATATCTCAGTAAAATCCATCAGTCG TTAA CGATTGGTGGATTTTACTGAACTATAA ATGAATTTTTCTGAA TERM 1347 1018274 - 1018332 + F 100 -12.9 -2.88667 | gap 1, opp_overlap 1018273 1018274 1018290, overlap 1018290 GAAGCTGAGATAAAC -TTATATCTCAGTAAAATCCATCAGTCG TTAA CGATTGGTGGATTTTACTGAACTATAAA TGAATTTTTCTGAAA TERM 1348 1018315 - 1018290 - f 70 -6.1 -4.27617 | opp_overlap 1018290 1018274, overlap 1018273 1018274 TATATCTCAGTAAAA TCCATCAGTCG TTAA CGATTGGTGGA TTTTACTGAACTATA TERM 1349 1018290 - 1018315 + F 95 -10.5 -4.27617 | opp_overlap 1018273 1018274 1018290, overlap 1018274 TATATCTCAGTAAAA TCCATCAGTCG TTAA CGATTGGTGGA TTTTACTGAACTATA TERM 1350 1019602 - 1019592 - g 81 -5.4 -5.1963 | GGTAACCAACAAAAA GCAA TTA TTGC TCGTGAAGTGGATCG SAK_1050 1018359 - 1019894 + | carbohydrate ABC transporter periplasmic-binding protein SAK_1051 1019887 - 1020948 + | carbohydrate ABC transporter permease SAK_1052 1020950 - 1021906 + | carbohydrate ABC transporter permease TERM 1351 1021945 - 1021904 - f 80 -7.6 -4.25388 | opp_overlap 1021905 1021914, overlap 1021914 TATATTAAAACGAAA TAAATAAAAAGAAACTAG TATAAG CTAGTTTCTTTTTATTGT TTGTGAATTTGTGAA TERM 1352 1021905 - 1021944 + F 100 -11.8 -4.04319 | opp_overlap 1021904 1021914, overlap 1021914 ATATTAAAACGAAAT AAATAAAAAGAAACTAGT ATAA GCTAGTTTCTTTTTATTG TTTGTGAATTTGTGA TERM 1353 1021935 - 1021914 - f 100 -7.4 -5.5454 | opp_overlap 1021905 1021914, overlap 1021904 CGAAATAAATAAAAA GAAACTAG TATAAG CTAGTTTC TTTTTATTGTTTGTG TERM 1354 1021914 - 1021935 + F 100 -8.1 -5.42164 | opp_overlap 1021914 1021904, overlap 1021905 CGAAATAAATAAAAA GAAACTAGT ATAA GCTAGTTTC TTTTTATTGTTTGTG TERM 1355 1022043 - 1022021 - f 81 -2 -5.9362 | TAAAATATAAAAAAA TAGAAAATTG AGT CATTATTCTA GTAAGAGTTTGTGAA nox 1022111 - 1023481 + | NADH oxidase, water-forming TERM 1356 1023491 - 1023521 + T 77 -8.4 -3.8901 | opp_overlap 1023478 1023496, overlap 1023496 GATTAATTTAAAATT AAAAAGGTTAAGCG AAA TGCTTAGCCTTTTA TTTCATCCTTTAACA TERM 1357 1023496 - 1023516 + T 91 -8.3 -4.96388 | opp_overlap 1023496, overlap 1023491 ATTTAAAATTAAAAA GGTTAAGCG AAA TGCTTAGCC TTTTATTTCATCCTT TERM 1358 1023516 - 1023496 - T 76 -5.4 -5.10154 | opp_overlap 1023496 1023491 ATTTAAAATTAAAAA GGTTAAGC GAAAT GCTTAGCC TTTTATTTCATCCTT TERM 1359 1023586 - 1023565 - T 93 -8.1 -5.29846 | opp_overlap 1023565 AACGGCAAAGAAAAA GCTAAGATA TTCC TATCCTAGC TTTTTTTCAACTATG TERM 1360 1023565 - 1023586 + T 86 -5.9 -5.45726 | opp_overlap 1023565 AACGGCAAAGAAAAA GCTAAGATA TTCC TATCCTAGC TTTTTTTCAACTATG ldh 1024591 - 1023602 - | L-lactate dehydrogenase TERM 1361 1024365 - 1024395 + g 100 -9.1 -5.48825 | gap 1 ACAACAAGGTCAGCA TCTGCGCAGTCTGC ATAA GTAG-CTGCGTAGA TTTTTTTAGGTGATG TERM 1362 1024470 - 1024450 - G 80 -11.3 -3.23216 | opp_overlap 1024448 CTTCAGCATCACCAA CAGCTTTAT CAA ATAAAGCTG GGATTTCAATGATAC TERM 1363 1024698 - 1024687 - H 71 -3 -5.15117 | TAAAATGTGAAAAAA TTTG CAAA CAAA TTGAAATATCATAGA TERM 1364 1026878 - 1026851 - g 75 -9.2 -3.27525 | TCGCTTCAAAGTGAA CGCTGTACGT AATATGGG ACGCACAGCG ACTGGGGTACGAGGC gyrA 1024830 - 1027289 + | DNA gyrase subunit A SAK_1056 1027296 - 1028039 + | sortase family protein TERM 1365 1028289 - 1028305 + G 75 -8.7 -3.54459 | opp_overlap 1028275 GGTAGGCCGAATTGG CCACGTG AAG CATGTGG TTTACGACACCTTGC SAK_1057 1028055 - 1028468 + | glyoxylase family protein TERM 1366 1028468 - 1028503 + F 100 -15 -3.78312 | opp_overlap 1028469 1028473 1028477, overlap 1028469 1028473 1028477 AGAATTACATGAATA ATAAACAAAGTTGCGT GGAT ACGCAACTTTGTTTAA TTTACTGAATAATTT TERM 1367 1028469 - 1028502 + F 100 -18.5 -2.86264 | opp_overlap 1028469 1028473 1028477, overlap 1028468 1028473 1028477 GAATTACATGAATAA TAAACAAAGTTGCGT GGAT ACGCAACTTTGTTTA ATTTACTGAATAATT TERM 1368 1028502 - 1028469 - f 100 -18.5 -3.79849 | opp_overlap 1028469 1028468 1028473 1028477, overlap 1028473 1028477 GAATTACATGAATAA TAAACAAAGTTGCGT GGAT ACGCAACTTTGTTTA ATTTACTGAATAATT TERM 1369 1028473 - 1028498 + F 100 -14.9 -4.10953 | opp_overlap 1028473 1028469 1028477, overlap 1028469 1028468 1028477 TACATGAATAATAAA CAAAGTTGCGT GGAT ACGCAACTTTG TTTAATTTACTGAAT TERM 1370 1028498 - 1028473 - f 100 -14.9 -4.5032 | opp_overlap 1028469 1028468 1028473 1028477, overlap 1028469 1028477 TACATGAATAATAAA CAAAGTTGCGT GGAT ACGCAACTTTG TTTAATTTACTGAAT TERM 1371 1028494 - 1028477 - f 100 -9.9 -4.78597 | opp_overlap 1028477 1028473 1028469 1028468, overlap 1028473 1028469 TGAATAATAAACAAA GTTGCGT GGAT ACGCAAC TTTGTTTAATTTACT TERM 1372 1028477 - 1028494 + F 93 -9.9 -4.63675 | opp_overlap 1028473 1028469 1028477, overlap 1028473 1028469 1028468 TGAATAATAAACAAA GTTGCGT GGAT ACGCAAC TTTGTTTAATTTACT TERM 1373 1028645 - 1028655 + G 76 -3.2 -5.34857 | AAAAAGCTATTGTTT GCAG GCC TTGC TTTTATTTTATTTAC TERM 1374 1028928 - 1028918 - g 93 -4 -6.09196 | GTTAAAATAAAAAAA TTAG GGT CTAA CGATACCTTAGCAGT TERM 1375 1029330 - 1029316 - g 78 -5.8 -4.77986 | GGAAACATTGAAAAA TTATCA TCT TGATAA CGCTGTAACGGAAAA SAK_1058 1028621 - 1029583 + | hypothetical protein TERM 1376 1029610 - 1029591 - T 100 -10.8 -5.4833 | opp_overlap 1029591 GTAGTTAATAAAAAA GTCTAGCT TATA AGCTAGAC TTTTTTTACCCTAAA TERM 1377 1029591 - 1029610 + T 100 -10.8 -5.44119 | opp_overlap 1029591 GTAGTTAATAAAAAA GTCTAGCT TATA AGCTAGAC TTTTTTTACCCTAAA SAK_1059 1030773 - 1029646 - | Na+/H+ antiporter SAK_1060 1031033 - 1031416 + | IS1381 transposase protein A SAK_1061 1031449 - 1031838 + | IS1381 transposase protein B TERM 1378 1031911 - 1031867 - T 100 -15.3 -4.22554 | opp_overlap 1031878, overlap 1031878 CTATTCAAGAAATAA GAGTAAAAAAACTTAGCTACT TAA AGTAGCTAAGTTTTTATTCCC ACTCAACAGTTGCAG TERM 1379 1031878 - 1031900 + T 100 -13.6 -5.07486 | opp_overlap 1031878 1031867 ATAAGAGTAAAAAAA CTTAGCTACT TAA AGTAGCTAAG TTTTTATTCCCACTC TERM 1380 1031900 - 1031878 - T 100 -13.6 -5.6473 | opp_overlap 1031878, overlap 1031867 ATAAGAGTAAAAAAA CTTAGCTACT TAA AGTAGCTAAG TTTTTATTCCCACTC guaA 1033466 - 1031904 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1381 1032532 - 1032544 + g 70 -2.7 -5.15526 | AAAACGTACACGAAC TCATT TCC GATGA TTTTTCGTTTTCTCT SAK_1063 1033679 - 1034377 + | GntR family transcriptional regulator gid 1034491 - 1035825 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1382 1035834 - 1035861 + F 90 -9.3 -4.70453 | CTATTGATATATTCA TTTGACTTTGC CAACAA GCAAGGTCAAA TTTTCTATATTGATT SAK_1065 1035903 - 1036646 + | acetyltransferase SAK_1066 1036779 - 1037627 + | NPLA family lipoprotein TERM 1383 1037625 - 1037671 + T 100 -10.5 -5.82316 | opp_overlap 1037631 1037635, overlap 1037631 GATCAACCTGTTTGG TAAAAATAAATAAGCATGGTC AATTC GATCATGCTTATTTATTTCGA TTTTTTTTGAGTAAT TERM 1384 1037665 - 1037631 - T 100 -12.4 -4.56597 | opp_overlap 1037625 1037631, overlap 1037635 CCTGTTTGGTAAAAA TAAATAAGCATGGTCA ATT CGATCATGCTTATTTA TTTCGATTTTTTTTG TERM 1385 1037631 - 1037665 + T 100 -13.9 -4.1441 | opp_overlap 1037631 1037635, overlap 1037625 CCTGTTTGGTAAAAA TAAATAAGCATGGTC AATTC GATCATGCTTATTTA TTTCGATTTTTTTTG TERM 1386 1037661 - 1037635 - T 93 -8.8 -4.85782 | opp_overlap 1037631 1037625, overlap 1037631 TTTGGTAAAAATAAA TAAGCATGGTCA ATT CGATCATGCTTA TTTATTTCGATTTTT SAK_1067 1038147 - 1037659 - | hypothetical protein SAK_1068 1038313 - 1039275 + | nisin resistance protein Nsr, putative SAK_1069 1039301 - 1040053 + | ABC transporter, ATP-binding protein SAK_1070 1040055 - 1042010 + | ABC transporter, permease protein, putative TERM 1387 1042035 - 1042014 - f 89 -8.8 -4.67234 | opp_overlap 1042014 ATTGAACGCTAAAAA GGATTGGT TATTTT ACCAATCC TTTTGCATTAATAGA TERM 1388 1042014 - 1042035 + F 87 -8.8 -4.30014 | opp_overlap 1042014 ATTGAACGCTAAAAA GGATTGGT TATTTT ACCAATCC TTTTGCATTAATAGA SAK_1071 1042120 - 1042788 + | DNA-binding response regulator SAK_1072 1042785 - 1043723 + | sensor histidine kinase TERM 1389 1043715 - 1043762 + T 100 -17 -3.36415 | gap 1, opp_overlap 1043717 1043721 1043725, overlap 1043721 1043725 ACTGCTGTTTCTATA CATAAATAAAGTTATGTAAAATA AAA TA-TTTACATAACTTTATTTATG TTACTATAGTTTATC TERM 1390 1043760 - 1043717 - T 100 -13.8 -2.87132 | gap 1, opp_overlap 1043715 1043721 1043725, overlap 1043721 1043725 TGCTGTTTCTATACA TAAATAAAGTTATGTAAA-AT AAA ATATTTACATAACTTTATTTA TGTTACTATAGTTTA TERM 1391 1043756 - 1043721 - T 90 -10.2 -4.12532 | gap 1, opp_overlap 1043715 1043721 1043725, overlap 1043717 1043725 GTTTCTATACATAAA TAAAGTTATGTAAA-AT AAA ATATTTACATAACTTTA TTTATGTTACTATAG TERM 1392 1043721 - 1043756 + T 93 -10.2 -4.2586 | gap 1, opp_overlap 1043721 1043717 1043725, overlap 1043715 1043725 GTTTCTATACATAAA TAAAGTTATGTAAAATA AAA TA-TTTACATAACTTTA TTTATGTTACTATAG TERM 1393 1043752 - 1043725 - T 79 -6.6 -4.65722 | gap 1, opp_overlap 1043721 1043715 1043725, overlap 1043721 1043717 CTATACATAAATAAA GTTATGTAAA-AT AAA ATATTTACATAAC TTTATTTATGTTACT TERM 1394 1043725 - 1043752 + T 79 -6.6 -4.69415 | gap 1, opp_overlap 1043725 1043721 1043717, overlap 1043721 1043715 CTATACATAAATAAA GTTATGTAAAATA AAA TA-TTTACATAAC TTTATTTATGTTACT xerS 1044836 - 1043766 - | site-specific tyrosine recombinase XerS SAK_1074 1045289 - 1046950 + | ABC transporter, substrate-binding protein TERM 1395 1046983 - 1046953 - T 100 -9.8 -4.90002 | opp_overlap 1046958, overlap 1046958 TAAGACAGAATAAAA GAAAAGCGTTAGGA TAT TTCTAGCGCTTTTC TATACCAAAAGTAAC TERM 1396 1046978 - 1046958 - T 74 -3.9 -5.31091 | opp_overlap 1046958, overlap 1046953 CAGAATAAAAGAAAA GCGTTAGGA TAT TTCTAGCGC TTTTCTATACCAAAA TERM 1397 1046958 - 1046978 + T 85 -8.3 -4.52589 | opp_overlap 1046958 1046953 CAGAATAAAAGAAAA GCGTTAGGA TAT TTCTAGCGC TTTTCTATACCAAAA SAK_1075 1047756 - 1046983 - | hypothetical protein satD 1048432 - 1047746 - | satD protein TERM 1398 1048466 - 1048507 + r 95 -10.5 -4.49364 | opp_overlap 1048466 1048472 1048478, overlap 1048472 1048478 GTCTATTATAGCAGA CAAAAATAAAAATGTCTAT TTAA ATAGACATTTTTATTTGCG TTTCTTCTTAGCTTT TERM 1399 1048507 - 1048466 - R 100 -12.7 -2.87468 | opp_overlap 1048466 1048472 1048478, overlap 1048472 1048478 GTCTATTATAGCAGA CAAAAATAAAAATGTCTAT TTAA ATAGACATTTTTATTTGCG TTTCTTCTTAGCTTT TERM 1400 1048472 - 1048501 + r 100 -12.5 -3.95772 | opp_overlap 1048466 1048472 1048478, overlap 1048466 1048478 TATAGCAGACAAAAA TAAAAATGTCTAT TTAA ATAGACATTTTTA TTTGCGTTTCTTCTT TERM 1401 1048501 - 1048472 - R 100 -12.5 -5.02502 | opp_overlap 1048472 1048466 1048478, overlap 1048466 1048478 TATAGCAGACAAAAA TAAAAATGTCTAT TTAA ATAGACATTTTTA TTTGCGTTTCTTCTT TERM 1402 1048495 - 1048478 - R 100 -7.1 -5.71295 | opp_overlap 1048478 1048472 1048466, overlap 1048472 1048466 AGACAAAAATAAAAA TGTCTAT TTAA ATAGACA TTTTTATTTGCGTTT TERM 1403 1048478 - 1048495 + r 100 -7.1 -5.34381 | opp_overlap 1048472 1048466 1048478, overlap 1048472 1048466 AGACAAAAATAAAAA TGTCTAT TTAA ATAGACA TTTTTATTTGCGTTT ffh 1050064 - 1048499 - | signal recognition particle protein TERM 1404 1048912 - 1048935 + g 76 -7.5 -4.0896 | overlap 1048904 TTTCTCTCTCTTCTG GAGTCATTG ATGACA CAATGGCTC TTTTGCGAGCAATTT TERM 1405 1049740 - 1049766 + g 76 -8 -4.14615 | opp_overlap 1049718 1049746, overlap 1049741 TACCAGCACCTTGTA GACCAACCATCA TAA TGATGGTTGGAA TTTTAGGGGATTTTT TERM 1406 1049741 - 1049765 + g 83 -11.5 -3.07685 | opp_overlap 1049718 1049746, overlap 1049740 ACCAGCACCTTGTAG ACCAACCATCA TAA TGATGGTTGGA ATTTTAGGGGATTTT TERM 1407 1049760 - 1049746 - G 71 -8.6 -3.2614 | opp_overlap 1049741 1049740 CACCTTGTAGACCAA CCATCA TAA TGATGG TTGGAATTTTAGGGG SAK_1078 1050390 - 1050082 - | hypothetical protein TERM 1408 1050479 - 1050514 + r 82 -7.8 -4.43571 | gap 1, opp_overlap 1050470 1050479 1050485, overlap 1050480 1050485 AGACCACTTTAAAAT TTAAAAGGTTAGGACTA ACA TGG-CCTAACCTTTTAC TTTTGGTAGTTTTAT TERM 1409 1050480 - 1050513 + r 88 -11.3 -3.24516 | gap 1, opp_overlap 1050470 1050479 1050485, overlap 1050479 1050485 GACCACTTTAAAATT TAAAAGGTTAGGACTA ACA TGG-CCTAACCTTTTA CTTTTGGTAGTTTTA TERM 1410 1050485 - 1050508 + r 79 -6.8 -4.70319 | gap 1, opp_overlap 1050479 1050485, overlap 1050480 1050479 CTTTAAAATTTAAAA GGTTAGGACTA ACA TGG-CCTAACC TTTTACTTTTGGTAG TERM 1411 1050508 - 1050485 - R 78 -6.7 -4.4267 | opp_overlap 1050485 1050480 1050479, overlap 1050479 CTTTAAAATTTAAAA GGTTAGGAC TAACAT GGCCTAACC TTTTACTTTTGGTAG ciaH 1051816 - 1050503 - | sensor histidine kinase CiaH ciaR 1052480 - 1051800 - | DNA-binding response regulator CiaR TERM 1412 1052631 - 1052604 - R 80 -7.2 -4.66625 | opp_overlap 1052604 ACACAGACAAAGAAA TAGAGATTGA ATAATCCA TCAATCTCTA TTTGAGTTTATTAGA TERM 1413 1052604 - 1052631 + r 72 -7.2 -3.93262 | opp_overlap 1052604 ACACAGACAAAGAAA TAGAGATTGA ATAATCCA TCAATCTCTA TTTGAGTTTATTAGA pepN 1055191 - 1052642 - | aminopeptidase N TERM 1414 1055291 - 1055252 - R 100 -19.7 -4.37886 | opp_overlap 1055261, overlap 1055261 GTATGGGCTAGAAAA GATAGAAAAGCTGTAAC AAGATA GTTACAGCTTTTCTATC GCACGAACTATACTT TERM 1415 1055282 - 1055261 - R 93 -8.8 -4.80289 | opp_overlap 1055261, overlap 1055252 AGAAAAGATAGAAAA GCTGTAAC AAGATA GTTACAGC TTTTCTATCGCACGA TERM 1416 1055261 - 1055282 + r 88 -8.8 -4.52589 | opp_overlap 1055261 1055252 AGAAAAGATAGAAAA GCTGTAAC AAGATA GTTACAGC TTTTCTATCGCACGA phoU 1055990 - 1055337 - | phosphate transport system regulatory protein PhoU SAK_1083 1056581 - 1056024 - | phosphate ABC transporter, ATP-binding protein PstB, putative TERM 1417 1056064 - 1056082 + g 71 -4.6 -4.88163 | TCTTCAGTTTCTTTA TGTTTAGG ATT CATAAACA TTTCTTTTGTATTGC pstB 1057597 - 1056794 - | phosphate ABC transporter, ATP-binding protein PstB pstA 1058496 - 1057609 - | phosphate ABC transporter, permease protein PtsA TERM 1418 1058442 - 1058465 + g 73 -9 -3.35467 | opp_overlap 1058441, overlap 1058448 TTGTAACGATGATAG CTGCAATACT ATAG AGTATTGTAG TTGCTAATTTGTCAG pstC 1059403 - 1058486 - | phosphate ABC transporter, permease protein PstC TERM 1419 1059297 - 1059283 - G 74 -5 -4.86293 | CAACAAAAATCAAAA TCATCG CAA CAATGA AGACGATTAGGGCAA SAK_1087 1060309 - 1059449 - | phosphate ABC transporter, phosphate-binding protein TERM 1420 1060448 - 1060459 + r 71 -3 -5.27769 | AAGTTTCTAGGGTTT GAAA AGTA TTTC TTTTTCCTTTTTTAT SAK_1088 1061804 - 1060494 - | NOL1/NOP2/sun family putative RNA methylase TERM 1421 1061537 - 1061558 + g 79 -10.9 -2.87132 | CTTTCATTCCTTCTT GTGGTTCAG CAAT CTGAGCCAC TATCTGAGCAGCAGG TERM 1422 1061863 - 1061844 - R 88 -6.5 -5.40072 | opp_overlap 1061839 1061844 GGGCGTGCAAAAAAA CCTTCTA TTTAAT TAGAAGG TTTTAAGTTTATTTT TERM 1423 1061844 - 1061863 + r 74 -6.5 -4.46617 | opp_overlap 1061844, overlap 1061839 GGGCGTGCAAAAAAA CCTTCTA TTTAAT TAGAAGG TTTTAAGTTTATTTT SAK_1089 1062603 - 1061872 - | inositol monophosphatase family protein SAK_1090 1062907 - 1062626 - | hypothetical protein spxA 1063313 - 1062900 - | transcriptional regulator Spx ribF 1064288 - 1063356 - | bifunctional riboflavin kinase/FMN adenylyltransferase truB 1065185 - 1064301 - | tRNA pseudouridine synthase B TERM 1424 1065116 - 1065155 + g 76 -6.6 -4.50761 | gap 1, overlap 1065115 TATGTAATATCTTTC GAAGCTTGAAT-ACAGCAT CGT GTGATGTCATTCCAGCTTC TTTCTTTAAATTAAT TERM 1425 1065248 - 1065227 - R 80 -7.3 -4.68511 | opp_overlap 1065228, overlap 1065228 GGTAACACAAAGAAA GGAGCGTAA AAAC TTACGCTCT TTTGGTATAGTGCTA TERM 1426 1065228 - 1065247 + r 100 -10.8 -4.37502 | opp_overlap 1065228 1065227 GTAACACAAAGAAAG GAGCGTAA AAAC TTACGCTC TTTTGGTATAGTGCT TERM 1427 1065247 - 1065228 - R 87 -10.8 -3.40022 | opp_overlap 1065228, overlap 1065227 GTAACACAAAGAAAG GAGCGTAA AAAC TTACGCTC TTTTGGTATAGTGCT SAK_1094 1065708 - 1065277 - | acetyltransferase SAK_1095 1066992 - 1065721 - | hypothetical protein SAK_1096 1067616 - 1067026 - | hypothetical protein TERM 1428 1067707 - 1067684 - R 84 -3.3 -5.83211 | gap 1, opp_overlap 1067684 TACTAAAATAAAAAA TAAGCTT-TC AGTAA GAGAAGCTTA TTTAGATTAAATCTA SAK_1097 1068601 - 1067723 - | CAAX amino terminal protease family protein SAK_1098 1071337 - 1068707 - | ABC transporter, permease protein, putative SAK_1099 1072050 - 1071349 - | ABC transporter, ATP-binding protein TERM 1429 1072179 - 1072161 - R 71 -5.3 -4.58283 | TAATTTTTTTAAAAA TCTGAGC TAAAC ACTCAGA TTCCACTTTATTTAA topA 1074307 - 1072187 - | DNA topoisomerase I TERM 1430 1074246 - 1074259 + g 100 -3.1 -6.25242 | ATAACTAGATTTTTT TTAGC AGTA GCTGA TTTTTTTTTACTTGT SAK_1101 1075244 - 1074402 - | DNA processing protein DprA, putative TERM 1431 1075372 - 1075347 - R 93 -6.9 -5.40474 | opp_overlap 1075350, overlap 1075330 1075350 ATTTTTTCAAAAAAA TAAGACTAGGA TTTT TCCTAGCCTTT GACAAAAAATTAACG TERM 1432 1075369 - 1075350 - R 93 -8.6 -4.79949 | opp_overlap 1075350, overlap 1075347 TTTTCAAAAAAATAA GACTAGGA TTTT TCCTAGCC TTTGACAAAAAATTA SAK_1102 1076410 - 1075382 - | iron chelate uptake ABC transporter, iron chelate-binding protein SAK_1103 1077233 - 1076472 - | iron chelate uptake ABC transporter, ATP-binding protein SAK_1104 1078204 - 1077230 - | iron chelate uptake ABC transporter, permease protein SAK_1105 1079163 - 1078201 - | iron chelate uptake ABC transporter, permease protein TERM 1433 1078791 - 1078769 - G 70 -6.4 -4.12456 | ATATTATCCTTAAAA GTAATCATTT TTA AAATGGTTAC AAAAAGAAGCGATCC SAK_1106 1079950 - 1079402 - | maltose O-acetyltransferase rnhB 1080732 - 1079971 - | ribonuclease HII rbgA 1081570 - 1080719 - | ribosomal biogenesis GTPase SAK_1109 1082418 - 1081846 - | hypothetical protein TERM 1434 1082546 - 1082575 + r 100 -16.7 -3.43492 | opp_overlap 1082546, overlap 1082549 TTTTTAGTAGAAAAA TAACCTCGAATGA TACT TCATTCGAGGTTA TTGTGATAACTGTAA TERM 1435 1082575 - 1082546 - R 100 -16.7 -4.91109 | opp_overlap 1082546 1082549 TTTTTAGTAGAAAAA TAACCTCGAATGA TACT TCATTCGAGGTTA TTGTGATAACTGTAA TERM 1436 1082549 - 1082572 + r 100 -14 -3.8512 | opp_overlap 1082546, overlap 1082546 TTAGTAGAAAAATAA CCTCGAATGA TACT TCATTCGAGG TTATTGTGATAACTG cstA 1084103 - 1082619 - | carbon starvation protein CstA TERM 1437 1084128 - 1084146 + r 74 -6.8 -4.33165 | overlap 1084129 TCCTAAAAATTTTTT TGCTTAAT TTT ATTAAGCG TTTTCATGACTTTAG TERM 1438 1084129 - 1084145 + r 71 -8.1 -3.19176 | overlap 1084128 CCTAAAAATTTTTTT GCTTAAT TTT ATTAAGC GTTTTCATGACTTTA SAK_1111 1084993 - 1084259 - | DNA-binding response regulator TERM 1439 1084309 - 1084323 + g 81 -7.2 -4.63486 | TTACATTTGCTCTGC TAACAG GAA CTGTTA TTTTATTACAAAGGT TERM 1440 1084541 - 1084531 - G 70 -5.4 -4.41494 | overlap 1084539 TAGCTTCAATCAAAA GGAT ATC ATCC GCCGACACCAGATAG SAK_1112 1086744 - 1085005 - | sensor histidine kinase TERM 1441 1087081 - 1087061 - R 93 -6.2 -5.64873 | TTTAATAATAAAAAA GTGAGAAC AATAG ATTCTCAC TCACAATTAGCCTGG SAK_1113 1088094 - 1087720 - | hypothetical protein SAK_1114 1088328 - 1088185 - | hypothetical protein TERM 1442 1088451 - 1088394 - R 100 -12.4 -4.2558 | opp_overlap 1088394 1088441 1088445, overlap 1088445 CATCTTTGATTAAAA CTACCTACTTAAGAACAAAGAAGATA CTTAAC TTTCATCTTTGTTCCTAAATAGATAG TTGCTTAAAAACAAC TERM 1443 1088472 - 1088445 - R 87 -10.8 -3.53091 | opp_overlap 1088394 1088445 1088441, overlap 1088394 ATCTTTGTTCCTAAA TAGATAGTTGCT TAAA AACAACTATCTA TATATATATTGAGTT TERM 1444 1088445 - 1088472 + r 72 -8.6 -3.11609 | opp_overlap 1088394 1088445, overlap 1088394 1088441 ATCTTTGTTCCTAAA TAGATAGTTGCT TAAA AACAACTATCTA TATATATATTGAGTT SAK_1115 1088818 - 1088525 - | hypothetical protein SAK_1116 1089479 - 1088829 - | hypothetical protein TERM 1445 1089261 - 1089272 + g 84 -4.4 -5.42862 | TTTAGTAGTAACTTT GGAA TTTT TTCC TTTTTTTAAGAATAT SAK_1117 1090321 - 1089485 - | hypothetical protein TERM 1446 1089748 - 1089775 + g 75 -7.2 -4.24204 | opp_overlap 1089753, overlap 1089751 ATGACATTGCTCTTC CAACATTATGAT GTCT ATCATAATGTTC TTTTGCATCTGAATA TERM 1447 1089751 - 1089772 + g 83 -8.9 -4.23999 | opp_overlap 1089753, overlap 1089748 ACATTGCTCTTCCAA CATTATGAT GTCT ATCATAATG TTCTTTTGCATCTGA TERM 1448 1090459 - 1090435 - R 71 -8.1 -3.2352 | opp_overlap 1090442, overlap 1090442 CAAAAGTGAAGTGAA TCATTAACTTT TCT AAAGTTAATAA AGAATGGAATTAGCT SAK_1118 1090827 - 1090513 - | hypothetical protein SAK_1119 1091401 - 1090856 - | hypothetical protein SAK_1120 1092693 - 1091407 - | hypothetical protein TERM 1449 1092002 - 1092012 + g 88 -5.4 -5.73672 | TTATTAATTTTACCA GCTT TAT AAGC TTTTTTTACTTCTTT SAK_1121 1093049 - 1092693 - | hypothetical protein SAK_1122 1093393 - 1093058 - | hypothetical protein SAK_1123 1097815 - 1093406 - | FtsK/SpoIIIE family protein TERM 1450 1094248 - 1094275 + g 75 -9.2 -3.14132 | opp_overlap 1094246 1094250 CACGTTTGATTAATC CACGTCCTGGAA TATC TTCCATGATGTG TTGGTGACGACCGAC TERM 1451 1096600 - 1096586 - G 73 -8.6 -3.29096 | opp_overlap 1096566, overlap 1096567 TTGATTAACCATCAA TTGGAG TTG CTCCAA TACTAAACCTCGTGG SAK_1124 1099099 - 1097822 - | hypothetical protein SAK_1125 1099341 - 1099099 - | hypothetical protein SAK_1126 1099798 - 1099325 - | hypothetical protein SAK_1127 1102824 - 1099807 - | phage infection protein, putative TERM 1452 1101088 - 1101069 - G 73 -2.2 -5.31275 | opp_overlap 1101073 1101076, overlap 1101071 1101073 CGCCATCAGAAAAAA TGTAGTAT TTAG ATACTAAA TTGTGAGTGGTGTTA TERM 1453 1102880 - 1102860 - R 100 -14.1 -4.64676 | opp_overlap 1102855 1102860, overlap 1102841 TTATTTTCAACAAAA TAGGAAGGC TTT GCCTTCCTA TTCACTTATAGACTA TERM 1454 1102860 - 1102880 + r 100 -14.1 -3.2375 | opp_overlap 1102841 1102860, overlap 1102855 TTATTTTCAACAAAA TAGGAAGGC TTT GCCTTCCTA TTCACTTATAGACTA SAK_1128 1103196 - 1102906 - | hypothetical protein SAK_1129 1103653 - 1103363 - | hypothetical protein SAK_1130 1104552 - 1103770 - | hypothetical protein TERM 1455 1104280 - 1104297 + g 79 -7.1 -4.44667 | opp_overlap 1104282 CAATACAACTGAATC GATATCT GTTA AGATATC TTTCTTATTAAAAGC SAK_1131 1104872 - 1104549 - | hypothetical protein TERM 1456 1104680 - 1104723 + g 86 -8.4 -4.53419 | opp_overlap 1104676 1104673 CTGAAATACTATCAC TGTCGCTAATATCATCAA CAATGTAA TTGATAATATTAGCGCCA TTTATTGTTATAATA carB 1108181 - 1104999 - | carbamoyl phosphate synthase large subunit TERM 1457 1107217 - 1107203 - G 75 -8.6 -3.52204 | opp_overlap 1107202 1107211 1107215, overlap 1107199 CTAGTGTCAAACCAA CAGCTA TCT TAGCTG CTAATTTAGCAATTG carA 1109288 - 1108212 - | carbamoyl phosphate synthase small subunit TERM 1458 1108386 - 1108364 - G 75 -9.3 -3.21099 | CGGTTTTATCATTAA TCTCTTCAT GTGTA ATGAAGAGA GCCTCAGGGAAATCT pyrB 1110225 - 1109302 - | aspartate carbamoyltransferase catalytic subunit TERM 1459 1110280 - 1110261 - R 95 -9.3 -5.28176 | TTTAGCTAGAAAAAA GCCTCCT AAAACA AGGAGGC TCTGCAAAATAGTAA TERM 1460 1110319 - 1110290 - R 74 -7.3 -4.08216 | opp_overlap 1110290 GGAGGCTCTGCAAAA TAGTAAGCTAGAT AGGG AACTAACTTACTA TTTGTTAACGCAATT pyrC 1111682 - 1110390 - | dihydroorotase TERM 1461 1110507 - 1110519 + g 71 -4.8 -4.55997 | overlap 1110501 1110495 GTTGCTGGATTTGGA GGCA AATTC TGCC TTTATTATTCTCTCT pyrE 1112323 - 1111694 - | orotate phosphoribosyltransferase pyrF 1113037 - 1112336 - | orotidine 5'-phosphate decarboxylase TERM 1462 1113096 - 1113113 + r 93 -11.3 -3.737 | opp_overlap 1113096 GTATGACACAAAAAA CCTTGCC TGAG GGCAAGG TTTCATAAAAAGTTA TERM 1463 1113113 - 1113096 - R 100 -11.3 -5.39721 | opp_overlap 1113096 GTATGACACAAAAAA CCTTGCC TGAG GGCAAGG TTTCATAAAAAGTTA SAK_1138 1114470 - 1113250 - | hypothetical protein SAK_1139 1116063 - 1114522 - | ABC transporter, ATP-binding protein TERM 1464 1116122 - 1116102 - R 88 -6.9 -5.15634 | opp_overlap 1116102 GAGGTTATTAAAAAA CTCATAGAG ACA CTCTACAAG TTTTTAAATTAGTAC SAK_1140 1116532 - 1116194 - | ATP cone domain-containing protein TERM 1465 1116562 - 1116586 + r 72 -5.9 -4.42206 | opp_overlap 1116568, overlap 1116568 1116585 AATGTGGAAACAATG TTAAAATGATT TGC AATCATTTTCA TTTGTTAATTTCATT asd 1117778 - 1116702 - | aspartate-semialdehyde dehydrogenase TERM 1466 1117938 - 1117907 - R 73 -9 -2.80398 | opp_overlap 1117907 1117913, overlap 1117913 TAACCAACCTAATTA TAAAAAGGAATC TTGTATCC GATTCCTTTTTA TTGATTGCATATATC TERM 1467 1117907 - 1117938 + r 78 -9 -3.39856 | opp_overlap 1117907 1117913, overlap 1117913 TAACCAACCTAATTA TAAAAAGGAATC TTGTATCC GATTCCTTTTTA TTGATTGCATATATC TERM 1468 1117913 - 1117932 + r 72 -3.6 -5.1963 | opp_overlap 1117907 1117913, overlap 1117907 ACCTAATTATAAAAA GGAATC TTGTATCC GATTCC TTTTTATTGATTGCA SAK_1142 1119025 - 1117985 - | fibrinogen-binding protein, putative TERM 1469 1119418 - 1119440 + r 100 -13.6 -6.07969 | opp_overlap 1119418 TTTATGCAAAAAAAA GAAAGAACCA AAC TGGTTCTTTC TTTTTTTTGCTTTTC TERM 1470 1119440 - 1119418 - R 100 -13.6 -5.81412 | opp_overlap 1119418 TTTATGCAAAAAAAA GAAAGAACCA AAC TGGTTCTTTC TTTTTTTTGCTTTTC SAK_1143 1121191 - 1119716 - | cardiolipin synthase, putative TERM 1471 1121025 - 1121005 - G 71 -9 -3.18849 | opp_overlap 1121005, overlap 1120999 1121003 TGTACATTAGGAACA TCGCCCCT AGTAA AGGGGCAA TCATTACCAATATTA fhs 1123100 - 1121430 - | formate--tetrahydrofolate ligase TERM 1472 1121708 - 1121720 + g 76 -7.7 -4.1552 | GTATTTGTGCCTTAG GTCCA AAA TGGAC TTTATTACCACCATA lplA 1124208 - 1123189 - | lipoate-protein ligase A TERM 1473 1124151 - 1124139 - G 82 -7.7 -4.45168 | TTTGTAAAATATAAA CTTGC ATG GCAAG TGCAATCGCACCGTC SAK_1146 1125113 - 1124235 - | hypothetical protein SAK_1147 1125900 - 1125082 - | hypothetical protein TERM 1474 1125750 - 1125728 - GR 87 -10 -3.93236 | opp_overlap 1125727 1125730 CACCAATGTGACAAA TACCTATCTT CTA AAGACAGGTA CTCTTGACTAATGTT SAK_1148 1126225 - 1125893 - | GcvH family protein SAK_1149 1127240 - 1126254 - | luciferase family protein TERM 1475 1126704 - 1126694 - G 73 -3.2 -5.1417 | CCATAAAAGGAAAAA CACC GAA GGTA AAGCCTAAGCCAAGT SAK_1150 1128436 - 1127237 - | oxidoreductase, FAD/FMN-binding SAK_1151 1129266 - 1128433 - | hypothetical protein coaB 1129405 - 1130106 + | phosphopantothenate--cysteine ligase coaC 1130099 - 1130641 + | phosphopantothenoylcysteine decarboxylase SAK_1154 1130687 - 1131259 + | hypothetical protein TERM 1476 1131290 - 1131263 - f 70 -4 -4.946 | opp_overlap 1131266, overlap 1131264 1131265 ATTAAACATTAAAAA CTGGCCAGGAAG AAAT CTTCCTGGCTTT TCTTACTTATATTTT TERM 1477 1131289 - 1131264 - f 71 -7.5 -3.55133 | opp_overlap 1131266, overlap 1131263 1131265 TTAAACATTAAAAAC TGGCCAGGAAG AAAT CTTCCTGGCTT TTCTTACTTATATTT TERM 1478 1131288 - 1131265 - f 82 -11 -2.71995 | opp_overlap 1131266, overlap 1131264 1131263 TAAACATTAAAAACT GGCCAGGAAG AAAT CTTCCTGGCT TTTCTTACTTATATT TERM 1479 1131266 - 1131287 + F 100 -14.5 -4.82756 | opp_overlap 1131265 1131264 1131263 AAACATTAAAAACTG GCCAGGAAG AAAT CTTCCTGGC TTTTCTTACTTATAT TERM 1480 1132575 - 1132548 - g 70 -2.7 -5.07486 | opp_overlap 1132572 GAGTTTGAAGAAAAA CATAACCACAC CTATAT GTTTGGTTTTG AAGAAAGCTTCGGAT SAK_1155 1131369 - 1133087 + | phosphoglucomutase/phosphomannomutase family protein TERM 1481 1133096 - 1133116 + T 82 -4.7 -5.4492 | opp_overlap 1133088 1133096, overlap 1133088 AAATTAATAAAAAAA GCTAGGG AACTTAC TCCTAGC TTTTTTATATCTATC TERM 1482 1133116 - 1133096 - T 86 -4 -5.9003 | opp_overlap 1133096 1133088, overlap 1133088 AAATTAATAAAAAAA GCTAGG GAACTTACT CCTAGC TTTTTTATATCTATC SAK_1156 1135095 - 1133362 - | ABC transporter, ATP-binding/permease protein SAK_1157 1136814 - 1135096 - | ABC transporter, ATP-binding/permease protein TERM 1483 1136385 - 1136372 - G 80 -6.7 -4.74103 | GGGCTAATGGAAAAA GCCAT AATT ATGGC ACCAAAAACAATAAT TERM 1484 1136533 - 1136553 + g 75 -9.1 -3.57651 | CAGCGACATGACTTT TTGATAGAG ATC CTCTGTCAA TTGTCTCGTATAACC SAK_1158 1137428 - 1136826 - | hypothetical protein SAK_1159 1138407 - 1137430 - | hypothetical protein TERM 1485 1137788 - 1137806 + g 86 -6.8 -5.08169 | AAAGAAAAATCATCT TTGTTGAA ATT TTCAGCAA TTTTTTGAGCTGTCT TERM 1486 1138314 - 1138350 + g 74 -9.5 -3.00298 | overlap 1138316 AGTCATCAATCCTTG GAGTTAGGGTTAACGGA GTA TCTGATAGCACTAACTC TGTGTCGTTAGGAGA glyA 1139668 - 1138412 - | serine hydroxymethyltransferase SAK_1161 1140356 - 1139760 - | Sua5/YciO/YrdC/YwlC family protein SAK_1162 1141179 - 1140349 - | HemK family modification methylase TERM 1487 1140771 - 1140792 + g 91 -6.5 -5.40474 | opp_overlap 1140774 AAATGTCACTAGCTA GAACATCCC AAGA GGGGCGTTC TTTTTTTAGAGAAAT prfA 1142258 - 1141179 - | peptide chain release factor 1 TERM 1488 1141891 - 1141877 - G 75 -5.6 -4.78107 | GATCACCAGCAAAAA GCGCTG CTT CATCGC CACCAGCAGCACCAC tdk 1142862 - 1142293 - | thymidine kinase SAK_1165 1143000 - 1143182 + | 4-oxalocrotonate tautomerase TERM 1489 1143187 - 1143222 + F 86 -11.4 -2.60813 | opp_overlap 1143187 1143190 1143195, overlap 1143195 AGAAAAAATAAGAAA TAGTAAAAGAGGTTAC CCAG GTAACCTCTTTTGATA GTCTTTGCAAGCATA TERM 1490 1143222 - 1143187 - f 93 -9.2 -4.86216 | opp_overlap 1143187 1143195, overlap 1143190 1143195 AGAAAAAATAAGAAA TAGTAAAAGAGGTTAC CCAG GTAACCTCTTTTGATA GTCTTTGCAAGCATA TERM 1491 1143219 - 1143190 - f 83 -10.9 -2.96101 | opp_overlap 1143187 1143195, overlap 1143187 1143195 AAAAATAAGAAATAG TAAAAGAGGTTAC CCAG GTAACCTCTTTTG ATAGTCTTTGCAAGC TERM 1492 1143214 - 1143195 - f 100 -10.8 -4.55446 | opp_overlap 1143187 1143195, overlap 1143190 1143187 TAAGAAATAGTAAAA GAGGTTAC CCAG GTAACCTC TTTTGATAGTCTTTG TERM 1493 1143195 - 1143214 + F 100 -10.8 -4.37067 | opp_overlap 1143195 1143190 1143187, overlap 1143187 TAAGAAATAGTAAAA GAGGTTAC CCAG GTAACCTC TTTTGATAGTCTTTG TERM 1494 1143434 - 1143410 - g 75 -5.7 -4.86385 | ATGCTCAAAAACAAA TCCAAGAGGTC ATA GAAGTCTTGGA GCTCTACAAAAATCG SAK_1166 1143322 - 1144269 + | ApbE family protein TERM 1495 1144791 - 1144803 + G 74 -4.1 -5.10208 | CTAGATGCTAACTTT GATGA TTT TCGTC TTTTTGTTAAGATTA SAK_1167 1144287 - 1144889 + | NADPH-dependent FMN reductase domain-containing protein SAK_1168 1144913 - 1146148 + | NADPH-dependent FMN reductase domain-containing protein TERM 1496 1146161 - 1146198 + F 89 -7.9 -4.946 | gap 1, overlap 1146151 1146162 TAATCTCCTCGCTTT TGAGGATC-TGATACCTT AAA AAGATATCAAGATCCTCC TTTTTAATATTTAAT TERM 1497 1146162 - 1146197 + F 90 -11.4 -3.55133 | gap 1, overlap 1146151 1146161 AATCTCCTCGCTTTT GAGGATC-TGATACCTT AAA AAGATATCAAGATCCTC CTTTTTAATATTTAA SAK_1169 1146247 - 1147035 + | formate/nitrite transporter family protein TERM 1498 1147031 - 1147076 + T 100 -18.1 -3.44229 | opp_overlap 1147033 1147044, overlap 1147033 1147044 AAACTTCTCACCATG AATAAAAGAAAAACTGAGTAA TTTA TTACTCAGTTTTTCTTTTATA TTCTCATCATGAAAT TERM 1499 1147074 - 1147033 - T 100 -20.7 -3.21218 | opp_overlap 1147031 1147033 1147044, overlap 1147044 ACTTCTCACCATGAA TAAAAGAAAAACTGAGTAA TTTA TTACTCAGTTTTTCTTTTA TATTCTCATCATGAA TERM 1500 1147033 - 1147074 + T 100 -20.7 -3.29273 | opp_overlap 1147033 1147044, overlap 1147031 1147044 ACTTCTCACCATGAA TAAAAGAAAAACTGAGTAA TTTA TTACTCAGTTTTTCTTTTA TATTCTCATCATGAA TERM 1501 1147044 - 1147063 + T 100 -9.4 -5.60556 | opp_overlap 1147033 1147044, overlap 1147033 1147031 TGAATAAAAGAAAAA CTGAGTAA TTTA TTACTCAG TTTTTCTTTTATATT TERM 1502 1147063 - 1147044 - T 100 -9.4 -5.62288 | opp_overlap 1147044 1147033 1147031, overlap 1147033 TGAATAAAAGAAAAA CTGAGTAA TTTA TTACTCAG TTTTTCTTTTATATT pbuX 1148404 - 1147130 - | xanthine permease xpt 1148985 - 1148404 - | xanthine phosphoribosyltransferase guaC 1150223 - 1149240 - | guanosine 5'-monophosphate oxidoreductase TERM 1503 1150420 - 1150384 - R 100 -13.3 -4.64861 | opp_overlap 1150384 1150384 1150385 1150390, overlap 1150385 1150390 TTTTTGCAAAAGAAA TTAAAATCCTATAGAGC AGT ACTCTATAGGATTTTAC ATTTATTATATTGCT TERM 1504 1150384 - 1150421 + r 100 -11 -4.48583 | gap 1, opp_overlap 1150384 1150385 1150390, overlap 1150384 1150385 1150390 TTTTTGCAAAAGAAA T-TAAAATCCTATAGAG CAGTA CTCTATAGGATTTTACA TTTATTATATTGCTT TERM 1505 1150384 - 1150420 + r 90 -12.6 -3.27523 | opp_overlap 1150384 1150385 1150390, overlap 1150384 1150385 1150390 TTTTTGCAAAAGAAA TTAAAATCCTATAGAG CAGTA CTCTATAGGATTTTAC ATTTATTATATTGCT TERM 1506 1150419 - 1150385 - R 100 -16.8 -3.38435 | opp_overlap 1150384 1150384 1150385 1150390, overlap 1150384 1150390 TTTTGCAAAAGAAAT TAAAATCCTATAGAGC AGT ACTCTATAGGATTTTA CATTTATTATATTGC TERM 1507 1150385 - 1150419 + r 100 -16.1 -2.55429 | opp_overlap 1150385 1150384 1150390, overlap 1150384 1150384 1150390 TTTTGCAAAAGAAAT TAAAATCCTATAGAG CAGTA CTCTATAGGATTTTA CATTTATTATATTGC TERM 1508 1150390 - 1150414 + r 100 -11.6 -4.43755 | opp_overlap 1150385 1150384 1150390, overlap 1150385 1150384 1150384 CAAAAGAAATTAAAA TCCTATAGAG CAGTA CTCTATAGGA TTTTACATTTATTAT TERM 1509 1150414 - 1150390 - R 100 -12.3 -4.76478 | opp_overlap 1150390 1150385 1150384 1150384, overlap 1150385 1150384 CAAAAGAAATTAAAA TCCTATAGAGC AGT ACTCTATAGGA TTTTACATTTATTAT SAK_1173 1151766 - 1150426 - | drug:H+ antiporter-2 (DHA2) family protein TERM 1510 1151829 - 1151800 - H 88 -8.6 -4.49311 | opp_overlap 1151795 1151800, overlap 1151802 ATTATTATCATAAAA TAGAGCACCCCG CTAAAT CAAGGTGCTCCA TTTAATTCATTCGAA TERM 1511 1151827 - 1151802 - H 81 -9 -3.85254 | opp_overlap 1151800 1151795, overlap 1151800 TATTATCATAAAATA GAGCACCCCG CTAAAT CAAGGTGCTC CATTTAATTCATTCG SAK_1174 1152058 - 1152729 + | hypothetical protein TERM 1512 1152795 - 1152763 - T 72 -8.6 -2.99687 | opp_overlap 1152763 1152768, overlap 1152762 1152759 1152755 1152750 AAGAAAACTAATAAC TAAAAGGCACTG GTTTAATTT CAGCGCCTTTTA TTAATCAATCTCCAG SAK_1175 1154800 - 1152800 - | K+ uptake permease (KUP) family protein TERM 1513 1154554 - 1154539 - G 84 -3.2 -5.76237 | opp_overlap 1154541, overlap 1154541 1154542 TATATAAAGAAAAAA TACCAC CTTC GTGGTG ATTATCCGCCTTTAA TERM 1514 1154552 - 1154541 - G 73 -5.8 -4.49311 | opp_overlap 1154541, overlap 1154539 1154542 TATAAAGAAAAAATA CCAC CTTC GTGG TGATTATCCGCCTTT TERM 1515 1154783 - 1154753 - G 76 -6.3 -4.54404 | opp_overlap 1154753, overlap 1154755 TAAAGCAATAATAAA TCCTGCTTTTGAT GCTTT ATCAAAAGAAGAA TGATTGACATGTTGC SAK_1176 1155696 - 1154935 - | short chain dehydrogenase/reductase family oxidoreductase eutD 1156750 - 1155758 - | phosphotransacetylase SAK_1178 1157660 - 1156776 - | ribosomal large subunit pseudouridine synthase A ppnK 1158484 - 1157657 - | inorganic polyphosphate/ATP-NAD kinase SAK_1180 1159139 - 1158468 - | RelA/SpoT domain-containing protein TERM 1516 1158935 - 1158914 - G 76 -9.5 -3.30443 | opp_overlap 1158925, overlap 1158925 GTACCATGATACGAA GACCTGCAA TATC TTGCAAGTC CTGAGCAAGATTTTC SAK_1181 1159249 - 1159839 + | hypothetical protein TERM 1517 1159846 - 1159866 + F 100 -12.7 -4.59069 | opp_overlap 1159850 AATAACTAACGTTGA GAGATTGGA TTT TCCAATCTC TTTTATAATTCTCAT prs 1160015 - 1160989 + | ribose-phosphate pyrophosphokinase SAK_1183 1160993 - 1162108 + | cysteine desulfurase, putative SAK_1184 1162110 - 1162457 + | hypothetical protein SAK_1185 1162618 - 1163250 + | redox-sensing transcriptional repressor Rex radC 1163943 - 1163263 - | DNA repair protein RadC TERM 1518 1163345 - 1163358 + g 79 -3.1 -5.57888 | overlap 1163346 CAGACAATTCCCAGA TGATC ACAT GATCG TTTTATTTTTTTAGT TERM 1519 1164041 - 1163997 - R 100 -13.4 -3.5594 | opp_overlap 1164008, overlap 1164008 AACTCATGTTTTAAA TCAATAAAAAATACTTAGAT GAAAA ATCTAAGTATTTTTTATTTA ACGATAGGTTCGTGC TERM 1520 1164030 - 1164008 - R 100 -7.9 -5.59655 | opp_overlap 1164008, overlap 1163997 TAAATCAATAAAAAA TACTTAGAT GAAAA ATCTAAGTA TTTTTTATTTAACGA TERM 1521 1164008 - 1164030 + r 100 -7.9 -5.63517 | opp_overlap 1164008 1163997 TAAATCAATAAAAAA TACTTAGAT GAAAA ATCTAAGTA TTTTTTATTTAACGA SAK_1187 1165172 - 1164039 - | hypothetical protein arb 1166699 - 1165263 - | 6-phospho-beta-glucosidase SAK_1189 1167476 - 1166862 - | GDSL family lipase/acylhydrolase SAK_1190 1168398 - 1167577 - | Cof-like hydrolase family protein TERM 1522 1168813 - 1168795 - H 81 -3.9 -5.64304 | TAATACAACAAAAAA TCCTTAC ATGAG ATAAGGA GATTAAACGACCCTG TERM 1523 1169803 - 1169815 + G 78 -7.7 -4.34345 | CTATTATTGATATTG CCAAC AGC GTTGG TTTTAATAATCTATC SAK_1191 1169022 - 1169951 + | AraC family transcriptional regulator TERM 1524 1169949 - 1169980 + T 100 -13.3 -5.72254 | opp_overlap 1169949 ATAAATACAAAAAAA TAGAAACTAGTCA AATCCA TGACTAGTTTCTA TTTTTTATTATTTAA TERM 1525 1169980 - 1169949 - T 100 -13.3 -5.90231 | opp_overlap 1169949 ATAAATACAAAAAAA TAGAAACTAGTCA AATCCA TGACTAGTTTCTA TTTTTTATTATTTAA SAK_1192 1171540 - 1170008 - | chloride channel (ClC) family protein TERM 1526 1171599 - 1171648 + r 71 -8.1 -3.35992 | opp_overlap 1171614, overlap 1171607 AACTTTCTAGGAACT CTTGGTAACTAAAAATACCTCTC ATCA GAGAAGTACTTTTAGTTAATAGG TTACTTACGATACAT TERM 1527 1171607 - 1171640 + r 71 -8.3 -3.23598 | opp_overlap 1171614, overlap 1171599 AGGAACTCTTGGTAA CTAAAAATACCTCTC ATCA GAGAAGTACTTTTAG TTAATAGGTTACTTA TERM 1528 1171633 - 1171614 - R 86 -7.2 -4.8622 | opp_overlap 1171607 1171599 CTTGGTAACTAAAAA TACCTCTC ATCA GAGAAGTA CTTTTAGTTAATAGG potD 1172722 - 1171649 - | spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein TERM 1529 1172094 - 1172108 + g 81 -7.2 -4.56775 | opp_overlap 1172103 GCCTTAACGTTTGGT GTTAGA GCA TCTAAC TTTTTAGAAGCGGCT potC 1173491 - 1172715 - | spermidine/putrescine ABC transporter, permease protein PotC potB 1174282 - 1173488 - | spermidine/putrescine ABC transporter, permease protein PotB potA 1175420 - 1174266 - | spermidine/putrescine ABC transporter, ATP-binding protein murB 1176371 - 1175469 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1530 1176433 - 1176419 - R 76 -3.5 -5.4492 | opp_overlap 1176419 TATAGACACAAAAAA TCGGC ATAAA ACCGA TTTCTATTATACCAA folK 1177003 - 1176515 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1531 1176756 - 1176766 + g 80 -6.8 -4.86939 | overlap 1176742 TGCTCATGTCTCACG CGCT TTA AGCG TTTTTCAATTTCTTG folB 1177362 - 1177000 - | dihydroneopterin aldolase folP 1178167 - 1177364 - | dihydropteroate synthase folE 1178734 - 1178171 - | GTP cyclohydrolase I folC 1180015 - 1178753 - | folylpolyglutamate synthase rarD 1180904 - 1180017 - | rarD protein TERM 1532 1180878 - 1180895 + g 70 -5.7 -4.41548 | opp_overlap 1180877 1180880 GGCTGACAAGCCAAG GATAATT CCTA AATTATC TTTTCTCAACTCTCA thrB 1181757 - 1180891 - | homoserine kinase hom 1183042 - 1181759 - | homoserine dehydrogenase TERM 1533 1181819 - 1181832 + g 70 -5.3 -4.44211 | ACTCTCAGGAAACTC CTCAA TAAA TTGAG TTATTTTCTCTTGGC TERM 1534 1182679 - 1182666 - G 76 -6.7 -4.38927 | opp_overlap 1182665 CCCTCATAGAATAAA GCTAG ACCT CTAGC GTCTGCTAAATCCAT SAK_1206 1183219 - 1184106 + | polysaccharide deacetylase family protein TERM 1535 1184131 - 1184104 - T 100 -14.4 -3.44825 | opp_overlap 1184104 1184110, overlap 1184110 AAAACGATTAACCAA TAAAAAGAAGCC TTCT GGCTTCTTTTTA TTCTTCATAAGATTT TERM 1536 1184104 - 1184131 + T 100 -14.4 -3.73936 | opp_overlap 1184104 1184110, overlap 1184110 AAAACGATTAACCAA TAAAAAGAAGCC TTCT GGCTTCTTTTTA TTCTTCATAAGATTT TERM 1537 1184125 - 1184110 - T 95 -9 -5.20534 | opp_overlap 1184104 1184110, overlap 1184104 ATTAACCAATAAAAA GAAGCC TTCT GGCTTC TTTTTATTCTTCATA TERM 1538 1184110 - 1184125 + T 95 -9 -5.31855 | opp_overlap 1184110 1184104, overlap 1184104 ATTAACCAATAAAAA GAAGCC TTCT GGCTTC TTTTTATTCTTCATA SAK_1207 1184866 - 1184129 - | glycine betaine transporter OpuD, interruption-C SAK_1208 1185277 - 1184888 - | IS1381 transposase protein B SAK_1209 1185693 - 1185310 - | IS1381 transposase protein A TERM 1539 1185889 - 1185870 - R 74 -9.4 -2.76093 | ATTTGAACAAATGCA TTATTGGG AACA CCCAATAA AAAACTTAACCCTCC TERM 1540 1186661 - 1186638 - R 100 -12.6 -5.4505 | opp_overlap 1186638 1186641 CTCCTCAACAAAAAA GAACCAGATA ACAT TATCTGGTTC TTGTGTTTGACTTAG TERM 1541 1186638 - 1186661 + r 100 -12.6 -3.86372 | opp_overlap 1186638, overlap 1186641 CTCCTCAACAAAAAA GAACCAGATA ACAT TATCTGGTTC TTGTGTTTGACTTAG TERM 1542 1186641 - 1186658 + r 82 -8.5 -4.04188 | opp_overlap 1186638, overlap 1186638 CTCAACAAAAAAGAA CCAGATA ACAT TATCTGG TTCTTGTGTTTGACT SAK_1211 1188056 - 1186680 - | aldehyde dehydrogenase family protein SAK_1212 1189137 - 1188130 - | hypothetical protein TERM 1543 1189231 - 1189194 - R 100 -15.1 -4.25848 | opp_overlap 1189195 1189200, overlap 1189195 AACGTGGCAGGAAAA CTGAAAGAGGACCAGAA TATG TTCTGATCCTCTTTCAT TACTAATTCACAATT TERM 1544 1189195 - 1189230 + r 100 -16.4 -3.27476 | opp_overlap 1189194 1189195, overlap 1189200 ACGTGGCAGGAAAAC TGAAAGAGGACCAGAA TATG TTCTGATCCTCTTTCA TTACTAATTCACAAT TERM 1545 1189230 - 1189195 - R 100 -18.6 -3.15027 | opp_overlap 1189195 1189200, overlap 1189194 ACGTGGCAGGAAAAC TGAAAGAGGACCAGAA TATG TTCTGATCCTCTTTCA TTACTAATTCACAAT TERM 1546 1189200 - 1189225 + r 91 -10.5 -3.98113 | opp_overlap 1189195 1189194, overlap 1189195 GCAGGAAAACTGAAA GAGGACCAGAA TATG TTCTGATCCTC TTTCATTACTAATTC SAK_1213 1189931 - 1189245 - | hypothetical protein TERM 1547 1189530 - 1189551 + g 76 -6 -4.7078 | AATTTGTTTGTCAGT GATTTTTG TTTCAT CAAAAATC TTTTTACCTGCTTCA TERM 1548 1191275 - 1191250 - H 84 -9.9 -3.52896 | opp_overlap 1191254 TTAGCACGTACAGAA TCAACCATTTC GATT AAAATGGTTGA TGCCAAAACTGAAAA TERM 1549 1191355 - 1191314 - H 78 -9.7 -3.35278 | gap 1, opp_overlap 1191315 1191325 1191327, overlap 1191315 TTAACCACACATTAA CGGGTTATAGACATTGGCAA CTG TTTCCAATGTCTATAA-CAG ACTCTTTGAAGAAAA TERM 1550 1191355 - 1191315 - H 77 -9.9 -2.60685 | opp_overlap 1191315 1191325 1191327, overlap 1191314 TAACCACACATTAAC GGGTTATAGACATTGGCAA CTG TTTCCAATGTCTATAACAG ACTCTTTGAAGAAAA TERM 1551 1191748 - 1191774 + H 100 -11 -5.61913 | opp_overlap 1191748 1191740 ATTAAAATCATTAAA CTTGTTTCCATT TTG ACTGGAAACAAG TTTTTTATATTTATT TERM 1552 1191774 - 1191748 - H 90 -11 -3.93659 | opp_overlap 1191748, overlap 1191740 ATTAAAATCATTAAA CTTGTTTCCATT TTG ACTGGAAACAAG TTTTTTATATTTATT SAK_1216 1192141 - 1192674 + | hypothetical protein TERM 1553 1192717 - 1192748 + T 100 -17.6 -4.01184 | opp_overlap 1192717 1192720 1192723, overlap 1192720 1192723 CACTGTCTATATAAA TAATAAGGCTGGAA GATT TTCCAGCCTTATTA TTTATGGTAATATCT TERM 1554 1192748 - 1192717 - T 100 -17.6 -4.0371 | opp_overlap 1192717 1192720 1192723, overlap 1192720 1192723 CACTGTCTATATAAA TAATAAGGCTGGAA GATT TTCCAGCCTTATTA TTTATGGTAATATCT TERM 1555 1192720 - 1192745 + T 100 -14.9 -4.12254 | opp_overlap 1192720 1192717 1192723, overlap 1192717 1192723 TGTCTATATAAATAA TAAGGCTGGAA GATT TTCCAGCCTTA TTATTTATGGTAATA TERM 1556 1192745 - 1192720 - T 100 -14.9 -4.14627 | opp_overlap 1192717 1192720 1192723, overlap 1192717 1192723 TGTCTATATAAATAA TAAGGCTGGAA GATT TTCCAGCCTTA TTATTTATGGTAATA TERM 1557 1192723 - 1192742 + T 100 -12.2 -4.17309 | opp_overlap 1192720 1192717 1192723, overlap 1192720 1192717 CTATATAAATAATAA GGCTGGAA GATT TTCCAGCC TTATTATTTATGGTA TERM 1558 1192742 - 1192723 - T 100 -12.2 -4.18983 | opp_overlap 1192723 1192720 1192717, overlap 1192720 1192717 CTATATAAATAATAA GGCTGGAA GATT TTCCAGCC TTATTATTTATGGTA tpx 1193244 - 1192750 - | thiol peroxidase TERM 1559 1193282 - 1193292 + r 71 -5.4 -4.64598 | CCTTTATTTTACTAT GAAG CTT CTTC TTTTTCGAATAATTG SAK_1218 1193976 - 1193317 - | hypothetical protein TERM 1560 1194523 - 1194489 - R 100 -11.6 -5.2112 | opp_overlap 1194489 1194488 AATAGTACTAAAAAA GTCACTTTGTAAATAG TAA CTATCCACTAAGTGAC CATTTTCATGTAAAG SAK_1220 1195384 - 1194743 - | transcriptional regulator TERM 1561 1195515 - 1195496 - R 100 -13.6 -4.62051 | opp_overlap 1195494 1195493 1195491 AAATATCATATAAAA GGAGCTGG TCTC CCAGCTCC GAGTGTCTTATCATA SAK_1221 1196099 - 1195548 - | alkaline shock protein 23, putative TERM 1562 1195622 - 1195642 + g 73 -9.1 -3.33885 | ATACTGCTTCTTTTG TTTTCTCTG CTC CAGAGGAAA TTGCTGCTTTAGCTT SAK_1222 1196318 - 1196121 - | hypothetical protein TERM 1563 1196293 - 1196303 + g 72 -4 -5.06816 | GAAACCTTATCAACT TTTG CAT CAAA TTTTTCTTCAGACAT SAK_1223 1196907 - 1196365 - | alkaline shock protein 23, putative SAK_1224 1197157 - 1196963 - | hypothetical protein SAK_1225 1197748 - 1197167 - | hypothetical protein SAK_1226 1198011 - 1197763 - | transglycosylase associated protein SAK_1227 1198304 - 1198059 - | transglycosylase associated protein TERM 1564 1198661 - 1198683 + r 90 -12.2 -3.06911 | opp_overlap 1198661, overlap 1198656 1198663 1198667 1198679 CAAATTATGCAAAAA GACTAAGAAT ACA ATTCTTAGTC TCTGATTATTTAAGT TERM 1565 1198683 - 1198661 - R 100 -12.2 -4.72386 | opp_overlap 1198661 1198656 1198663 1198667 1198679 CAAATTATGCAAAAA GACTAAGAAT ACA ATTCTTAGTC TCTGATTATTTAAGT TERM 1566 1198663 - 1198681 + r 74 -9 -3.08358 | opp_overlap 1198661, overlap 1198661 1198656 1198667 1198679 AATTATGCAAAAAGA CTAAGAAT ACA ATTCTTAG TCTCTGATTATTTAA pcrA 1200994 - 1198715 - | ATP-dependent DNA helicase PcrA TERM 1567 1201061 - 1201095 + r 72 -2.8 -5.3671 | opp_overlap 1201065, overlap 1201062 1201065 CTTTTTCCCAATAGA AAAAGGAGTTAAACAG ACG CTGTCTAACTCCTACC TTTTTTACTTCTCTT TERM 1568 1201091 - 1201065 - R 100 -14.6 -5.0916 | opp_overlap 1201062 1201061 1201065 TTCCCAATAGAAAAA GGAGTTAAACAG ACG CTGTCTAACTCC TACCTTTTTTACTTC TERM 1569 1201065 - 1201091 + r 90 -12.4 -2.95904 | opp_overlap 1201065, overlap 1201062 1201061 TTCCCAATAGAAAAA GGAGTTAAACAG ACG CTGTCTAACTCC TACCTTTTTTACTTC SAK_1229 1201486 - 1201100 - | hypothetical protein TERM 1570 1201582 - 1201624 + r 100 -26.8 -3.93708 | opp_overlap 1201588 1201593, overlap 1201593 TTTTTAACTGATCTA TCATAACAAAAGAGCTCAGA TAC TCTGAGCTCTTTTGTTATGA TTTCATGCTTTCTTT TERM 1571 1201618 - 1201588 - R 100 -20 -3.42699 | opp_overlap 1201582 1201593, overlap 1201593 ACTGATCTATCATAA CAAAAGAGCTCAGA TAC TCTGAGCTCTTTTG TTATGATTTCATGCT TERM 1572 1201613 - 1201593 - R 100 -14.1 -4.81212 | opp_overlap 1201582 1201593, overlap 1201588 TCTATCATAACAAAA GAGCTCAGA TAC TCTGAGCTC TTTTGTTATGATTTC TERM 1573 1201593 - 1201613 + r 100 -14.1 -4.86902 | opp_overlap 1201593 1201588, overlap 1201582 TCTATCATAACAAAA GAGCTCAGA TAC TCTGAGCTC TTTTGTTATGATTTC uraA 1202944 - 1201619 - | uracil permease TERM 1574 1202514 - 1202488 - G 83 -9.6 -3.91028 | opp_overlap 1202491 1202494, overlap 1202491 1202494 AACCTAAACCAATAA CAATAATCATAG GTC CAATGATTATTG GTGGCAAAATCTTAT TERM 1575 1203398 - 1203427 + H 71 -8.1 -3.33097 | gap 1, opp_overlap 1203397 1203400, overlap 1203397 1203400 GCCAATATTAATAAT G-AGTAGTAAGCTT ATT AAGTTTACTACTAC CTTTATTTGTGCGCT TERM 1576 1203400 - 1203424 + H 83 -10.9 -2.82776 | opp_overlap 1203397 1203400, overlap 1203398 1203397 CAATATTAATAATGA GTAGTAAGCTT ATT AAGTTTACTAC TACCTTTATTTGTGC TERM 1577 1203424 - 1203400 - H 72 -8.7 -2.98778 | opp_overlap 1203400 1203398 1203397, overlap 1203397 CAATATTAATAATGA GTAGTAAGCTT ATT AAGTTTACTAC TACCTTTATTTGTGC TERM 1578 1203465 - 1203485 + H 100 -11.3 -5.41359 | opp_overlap 1203465, overlap 1203450 TAGCATCTTTCAGAA GTTATCTCT TTT AGAGATAAC TTTTTTCGTTTCATT TERM 1579 1203485 - 1203465 - H 88 -11.3 -3.30441 | opp_overlap 1203450 1203465 TAGCATCTTTCAGAA GTTATCTCT TTT AGAGATAAC TTTTTTCGTTTCATT SAK_1231 1203540 - 1204886 + | amino acid carrier protein SAK_1232 1204949 - 1206184 + | cation diffusion facilitator (CDF) family protein TERM 1580 1206271 - 1206230 - f 80 -6.1 -4.87273 | opp_overlap 1206230 1206241 AATAGCTTACAAAAA TAAATTAAAAAGATTGAGA AGGA TCTCGGTCTTTTTAATTTG TTTTTATGTAAACGT TERM 1581 1206230 - 1206271 + F 100 -12.7 -4.9725 | opp_overlap 1206230, overlap 1206241 AATAGCTTACAAAAA TAAATTAAAAAGATTGAGA AGGA TCTCGGTCTTTTTAATTTG TTTTTATGTAAACGT TERM 1582 1206241 - 1206260 + F 79 -5 -5.1517 | opp_overlap 1206230, overlap 1206230 AAAATAAATTAAAAA GATTGAGA AGGA TCTCGGTC TTTTTAATTTGTTTT TERM 1583 1206366 - 1206378 + G 73 -6.3 -4.43879 | opp_overlap 1206366 1206365 ATACGTTCAATTAAT GGTTA TTT TAACC TTTTCATTCGCTGGT SAK_1233 1206343 - 1206735 + | hypothetical protein SAK_1234 1206716 - 1207411 + | hypothetical protein SAK_1235 1207480 - 1208103 + | hypothetical protein TERM 1584 1208101 - 1208124 + T 71 -8.3 -3.23598 | opp_overlap 1208101 1208107, overlap 1208092 CAGCATGGTTTAAAA TAAAAAGGC ATTAAC GCCTTTTTA TTAATACCTTAATTA TERM 1585 1208124 - 1208101 - T 85 -9 -4.10161 | opp_overlap 1208092 1208101, overlap 1208107 CAGCATGGTTTAAAA TAAAAAGGCA TTAA CGCCTTTTTA TTAATACCTTAATTA TERM 1586 1208118 - 1208107 - T 76 -3.6 -5.45802 | opp_overlap 1208101 1208092, overlap 1208101 GGTTTAAAATAAAAA GGCA TTAA CGCC TTTTTATTAATACCT TERM 1587 1208484 - 1208511 + T 79 -10 -2.9302 | opp_overlap 1208489, overlap 1208489 TTTATCAACAAAAAC AAAAAGACTTGC TTTA GCAAGTCTTTTA ATTATTATAATTCAA TERM 1588 1208489 - 1208506 + T 93 -9.9 -4.59414 | opp_overlap 1208489, overlap 1208484 CAACAAAAACAAAAA GACTTGC TTTA GCAAGTC TTTTAATTATTATAA TERM 1589 1208506 - 1208489 - T 100 -9.9 -5.74684 | opp_overlap 1208484 1208489 CAACAAAAACAAAAA GACTTGC TTTA GCAAGTC TTTTAATTATTATAA rpsA 1209718 - 1208516 - | 30S ribosomal protein S1 TERM 1590 1208662 - 1208674 + g 74 -7.7 -3.91084 | opp_overlap 1208673 CTGCTTGCGCTGGAC GCTCT TCA AGAGC TTTCATTGAAAGTGA TERM 1591 1209755 - 1209741 - R 93 -10 -4.64334 | opp_overlap 1209741, overlap 1209728 AATCCTCCAACAAAA GCTAGC CGA GCTAGC TTTTGATAACAATAT TERM 1592 1209741 - 1209755 + r 93 -10 -4.26344 | opp_overlap 1209741 1209728 AATCCTCCAACAAAA GCTAGC CGA GCTAGC TTTTGATAACAATAT TERM 1593 1209815 - 1209838 + r 87 -10.4 -3.65902 | opp_overlap 1209805 1209824 AAATATCTCTTTGAC GGTGTCAAAC AAAA GTTTGATACC TTTGACTGGGGTAGC SAK_1240 1210292 - 1210062 - | hypothetical protein TERM 1594 1210260 - 1210270 + g 72 -4 -5.0095 | opp_overlap 1210260, overlap 1210254 1210255 TTGAGCGTCTGAAAT TTGA ATT TCAA TTTTCTTATCTTTTT TERM 1595 1210369 - 1210338 - R 100 -17.6 -4.54047 | opp_overlap 1210346, overlap 1210346 TTATTGTACACAAAA TACTAAAAGCTTGC AAGA GCAAGCTTTTAGTA TAGACTTAATCTACT TERM 1596 1210361 - 1210346 - R 90 -9 -4.58236 | opp_overlap 1210346, overlap 1210338 CACAAAATACTAAAA GCTTGC AAGA GCAAGC TTTTAGTATAGACTT TERM 1597 1210346 - 1210361 + r 89 -9 -4.35518 | opp_overlap 1210346 1210338 CACAAAATACTAAAA GCTTGC AAGA GCAAGC TTTTAGTATAGACTT ilvE 1211397 - 1210375 - | branched-chain amino acid aminotransferase parC 1213969 - 1211510 - | DNA topoisomerase IV subunit A TERM 1598 1213261 - 1213242 - G 76 -10 -3.04322 | opp_overlap 1213242 TTTAAGGTTTCAATA GCAGTTCG CGAG CGAACCGC TACTCTCCCCTTACC TERM 1599 1213707 - 1213679 - G 73 -9 -3.35813 | GTGCATTTCAATCAA TGTCTCACGATT TTTCC AATCTTGAGACA TACGAACCATCGCGT TERM 1600 1213760 - 1213731 - G 76 -10.1 -2.98942 | overlap 1213733 1213737 ATCGCGTCATAGATA GAGGAATCCCCAT GAGG ATGGAAATTCCCC ATAACATTACCGACT TERM 1601 1213758 - 1213733 - G 70 -9.1 -3.05022 | overlap 1213731 1213737 CGCGTCATAGATAGA GGAATCCCCAT GAGG ATGGAAATTCC CCATAACATTACCGA parE 1216031 - 1214103 - | DNA topoisomerase IV subunit B TERM 1602 1216091 - 1216139 + H 80 -7.2 -4.60977 | gap 1, opp_overlap 1216091 1216114 1216130, overlap 1216086 1216092 1216094 1216130 TTTTTTATATTACAA GT-TTTTTGCTGTTTTTGCAAAA TTAT TTTTTTAAAAATAGCAAAAAGAC TTTTATGCTTATGTT SAK_1244 1216181 - 1216804 + | putative glycerol-3-phosphate acyltransferase PlsY ung 1217495 - 1216842 - | uracil-DNA glycosylase TERM 1603 1217554 - 1217585 + r 100 -11.8 -5.85737 | opp_overlap 1217554 ATATTTTATAAAAAA CGTTACTGCTTT ATTCATTC AAAGCAGTAACG TTTTTTTATTAATCT TERM 1604 1217585 - 1217554 - R 100 -12.5 -5.26918 | opp_overlap 1217554 ATATTTTATAAAAAA CGTTACTGCTTTA TTCATT CAAAGCAGTAACG TTTTTTTATTAATCT SAK_1246 1218079 - 1217594 - | hypothetical protein TERM 1605 1217957 - 1217973 + g 84 -5.1 -5.32882 | AATAGAAAAATGTTT CCCCA GTAAAGA TGGGG TTTTTTCTACTAATA neuA 1219434 - 1218193 - | N-acylneuraminate cytidylyltransferase TERM 1606 1219352 - 1219392 + g 81 -9.1 -4.12188 | GTATGGAAAATCATG GGTTTACCTGCTAGGAATA ACA TATTCTTATCTGGTAATCC TTTTGACCCTGATCG neuD 1220074 - 1219445 - | neuD protein neuC 1221225 - 1220071 - | UDP-N-acetylglucosamine-2-epimerase NeuC neuB 1222327 - 1221302 - | N-acetyl neuramic acid synthetase NeuB TERM 1607 1221909 - 1221923 + g 71 -4.3 -4.78572 | overlap 1221908 ACCGCCATACCCGTC GAAAG AATAA CTTTC TTTTGTTGCTTGCCA TERM 1608 1222060 - 1222038 - G 75 -7 -4.2558 | opp_overlap 1222038, overlap 1222025 GACTCTTCATCAAAA GGTGTTGAAA AGG TCTCCACACC TTTTGAAATTGCATA cpsL 1223727 - 1222327 - | polysaccharide biosynthesis protein CpsL SAK_1252 1224680 - 1223724 - | capsular polysaccharide biosynthesis protein CpsK SAK_1253 1225711 - 1224764 - | capsular polysaccharide biosynthesis protein CpsJ TERM 1609 1224929 - 1224953 + g 72 -9.5 -2.7556 | opp_overlap 1224929 1224928 1224926 ATTGACATAAAATAT TTCTGTTTTTT GTA AAAAAACGGAA TACTTACGTAAACTT cpsI 1226719 - 1225745 - | capsular polysaccharide biosythesis protein CpsI cpsH 1227858 - 1226719 - | capsular polysaccharide synthesis protein CpsH SAK_1256 1228436 - 1227954 - | polysaccharide biosynthesis protein CpsG cpsF 1228885 - 1228436 - | polysaccharide biosynthesis protein CpsF TERM 1610 1228637 - 1228616 - G 76 -6.5 -4.45115 | opp_overlap 1228633 1228635 ACCAATATAAAAGAA TGGTACTGC TACA GCGGCACCA GATGATATGATAACA TERM 1611 1228633 - 1228659 + g 80 -6.6 -4.77173 | opp_overlap 1228616, overlap 1228635 GTACTGCTACAGCGG CACCAGATGATA TGA TAACATCTGGTC TTTCTTTTCTAAGGA TERM 1612 1228635 - 1228657 + g 83 -9.2 -3.99938 | opp_overlap 1228616, overlap 1228633 ACTGCTACAGCGGCA CCAGATGATA TGA TAACATCTGG TCTTTCTTTTCTAAG TERM 1613 1228867 - 1228834 - G 76 -7.6 -4.0896 | gap 1 AAATGGGTTTCAAAA GGTTCAAGTG-TGCT AGATG ACCACCACTTGAACC AACCAGACAAATTTT cpsE 1230297 - 1228909 - | glycosyl transferase CpsE cpsD 1231008 - 1230310 - | tyrosine-protein kinase CpsD cpsC 1231711 - 1231019 - | capsular polysaccharide biosynthesis protein cpsC TERM 1614 1231599 - 1231585 - G 74 -2.8 -5.29445 | GCGTAACAATAAAAA GACTAT AGA AAAGTC CAGCTGTTGCAAATG cpsB 1232451 - 1231720 - | protein-tyrosine phosphatase CpsB TERM 1615 1232227 - 1232246 + g 93 -8 -5.10029 | opp_overlap 1232227 TTCTCCACCATATAA GATTTGAA GATG TTCAAATC TTTTTTCCGCTTCGT SAK_1262 1233914 - 1232457 - | regulatory protein CpsX cpsY 1234103 - 1235026 + | transcriptional regulator CpsY TERM 1616 1235018 - 1235042 + T 100 -11.5 -4.7629 | opp_overlap 1235018 AATCATAAAAATAAA CAGTCCTGAGA TTG TCTCAGAACTG TTTTTAAATTACTCA TERM 1617 1235042 - 1235018 - T 100 -13.7 -5.00267 | opp_overlap 1235018 AATCATAAAAATAAA CAGTCCTGAGA TTG TCTCAGAACTG TTTTTAAATTACTCA deoD 1236537 - 1235827 - | purine nucleoside phosphorylase SAK_1266 1237777 - 1236521 - | chloride channel (ClC) family protein TERM 1618 1236705 - 1236691 - G 77 -2.8 -5.52909 | overlap 1236681 1236693 1236703 TAATAGCTAAAAAAA TAGCTG CAC CAACCA ACATACTGGTTACTA punA 1238588 - 1237779 - | purine nucleoside phosphorylase arsC 1239034 - 1238627 - | arsenate reductase deoB 1240296 - 1239085 - | phosphopentomutase rpiA 1241024 - 1240353 - | ribose-5-phosphate isomerase A TERM 1619 1241258 - 1241239 - R 85 -5 -5.63517 | opp_overlap 1241239, overlap 1241232 TGTTCAAACAAAAAA GATGAGTT TCTT AGCTCATC TTTTTATGCATATAA TERM 1620 1241239 - 1241258 + r 86 -7.2 -4.89852 | opp_overlap 1241232 1241239 TGTTCAAACAAAAAA GATGAGTT TCTT AGCTCATC TTTTTATGCATATAA SAK_1271 1241972 - 1241262 - | hypothetical protein estA 1242850 - 1242062 - | tributyrin esterase TERM 1621 1242895 - 1242875 - R 95 -10.5 -4.25056 | opp_overlap 1242875 CATTCTAGCAAGAAA GGCTACCAA AAT TTGGTAACC TCTTAACACTATCAA TERM 1622 1242875 - 1242895 + r 70 -8.3 -3.05343 | opp_overlap 1242875 CATTCTAGCAAGAAA GGCTACCAA AAT TTGGTAACC TCTTAACACTATCAA SAK_1273 1244568 - 1242907 - | metallo-beta-lactamase family protein TERM 1623 1243133 - 1243144 + g 77 -3 -5.45813 | TTAACACGAGCTTTA GAAA TAAT TTTC TTTTCTTTTTTGCTG TERM 1624 1244564 - 1244574 + g 73 -5.4 -4.56093 | overlap 1244556 1244568 ATGATTTTTATGTCG CTCA TAA TGAG TTTTCTCCTTAAATT TERM 1625 1244849 - 1244835 - R 95 -8.6 -4.98522 | opp_overlap 1244834 1244829 1244828 1244835, overlap 1244838 AAGTGTATAGAAAAA GAAGTG AAA CACTTC CATTTCACTTCTTTT TERM 1626 1244835 - 1244860 + r 76 -6.3 -4.7373 | opp_overlap 1244835 1244838, overlap 1244834 1244829 1244828 AAGTGTATAGAAAAA GAAGTGAAA CACTTCCA TTTCACTTC TTTTTAATCAAATAA SAK_1274 1245625 - 1244864 - | ABC transporter, ATP-binding protein SAK_1275 1246488 - 1245625 - | ABC transporter, permease protein TERM 1627 1246043 - 1246031 - G 72 -7.7 -3.65812 | opp_overlap 1246030 CCTGTTGCAATATAA GCTTG CCC CAAGC GTGTGTAGAGAAAAT SAK_1276 1247505 - 1246501 - | hypothetical protein TERM 1628 1246546 - 1246567 + g 80 -10.3 -3.44924 | opp_overlap 1246543, overlap 1246544 CTGTTTCATAATCTT CTTAGGAAT TTTA ATTCCTAAG TGTTTGGCTGCTTTC TERM 1629 1247282 - 1247292 + g 74 -4 -5.24449 | TCGGCGTTTAAAACG GTTA ATT TAAC TTTTTTCCCTTTATA TERM 1630 1247589 - 1247563 - H 76 -3.6 -5.46706 | AGCGCAAAAGAAAAA GCGCCTGATAAA TAA CTTACCTTGCGC TCTCTATTGTTAGAC TERM 1631 1247672 - 1247645 - H 76 -6.4 -4.64598 | overlap 1247612 GAAGTACTCCAAAAA GTCGTATCTATG CACC CATAAACACAAC TTTATCTACGCCAGT fbpA 1247864 - 1249519 + | fibronectin/fibrinogen binding protein TERM 1632 1249517 - 1249540 + T 100 -9.6 -4.93316 | opp_overlap 1249517 CTTAAACTAAAAAAA TAGACTGGGA CATA TCCCTGTCTA TTTTTAGTGTTATTA TERM 1633 1249540 - 1249517 - T 100 -9.6 -5.72207 | opp_overlap 1249517 CTTAAACTAAAAAAA TAGACTGGGA CATA TCCCTGTCTA TTTTTAGTGTTATTA budA 1250292 - 1249573 - | alpha-acetolactate decarboxylase TERM 1634 1249955 - 1249969 + g 72 -3.6 -5.06451 | opp_overlap 1249956, overlap 1249956 AAAGACTTAAAGAGA TTTTGA CCT TCAAAG TTTTTTAGAATCATC budB 1251988 - 1250306 - | acetolactate synthase SAK_1280 1253324 - 1252098 - | hypothetical protein SAK_1281 1254504 - 1253314 - | hypothetical protein SAK_1282 1255057 - 1254596 - | NUDIX family hydrolase mutX 1255529 - 1255047 - | mutator mutT protein TERM 1635 1258955 - 1258922 - g 78 -5.6 -4.9218 | TACCTAGTACAAAAA GTTGGTAAT-GACTAT CAAA AT-GTCTATTACCAAC CTCAAACCATGACAA hylB 1255748 - 1258993 + | hyaluronate lyase TERM 1636 1259012 - 1259031 + T 100 -9.4 -5.29385 | opp_overlap 1259012 GCCGTACATAAAAAA CCTATCAT CAAA ATGATAGG TTTTTTGGTTCAATT TERM 1637 1259031 - 1259012 - T 100 -9.4 -5.36441 | opp_overlap 1259012 GCCGTACATAAAAAA CCTATCAT CAAA ATGATAGG TTTTTTGGTTCAATT rfbB 1260091 - 1259045 - | dTDP-glucose 4,6-dehydratase TERM 1638 1260092 - 1260106 + r 100 -5.8 -5.95286 | overlap 1260101 TTTAAATTCAGTCAT TTTTTC TCC GAAAAA TTTTTTCTTTTTGCT TERM 1639 1260101 - 1260113 + r 75 -4.9 -4.93696 | overlap 1260092 AGTCATTTTTTCTCC GAAAA ATT TTTTC TTTTTGCTGTTTGAA rmlC 1260891 - 1260298 - | dTDP-4-keto-6-deoxyglucose-3,5-epimerase rfbA 1261760 - 1260891 - | glucose-1-phosphate thymidylyltransferase TERM 1640 1261174 - 1261196 + g 73 -9.2 -2.75832 | overlap 1261173 1261178 TTAACATCAGTAATT TCAAGTTCTC CAC GAGGACTTGG CTTAATATTTTTAGC TERM 1641 1261763 - 1261775 + r 70 -6.3 -4.24745 | opp_overlap 1261753, overlap 1261753 TAATACCTTTCATAG TAAGG TCT CCTTA TTTATATTAATCCTA SAK_1288 1262922 - 1261819 - | oxidoreductase, FAD-binding SAK_1289 1263719 - 1262931 - | NIF3 family protein SAK_1290 1264392 - 1263709 - | hypothetical protein TERM 1642 1264487 - 1264451 - R 91 -7.3 -5.17488 | AACATCAAAAGAAAA GGAGCAGACCGAATG TATCAAC CACTCTGTCTCCTCC TAGTAAACTTATTCC SAK_1291 1265176 - 1264496 - | DNA replication protein DnaD, putative apt 1265812 - 1265294 - | adenine phosphoribosyltransferase TERM 1643 1265933 - 1265895 - R 100 -14.2 -3.64184 | opp_overlap 1265903, overlap 1265896 1265903 AAATAGTACTGGAAA CTTTAAAACCATATGCTA GTT TTGCATATGGTTTTAAAA ATTAGGCATCTGTTA TERM 1644 1265932 - 1265896 - R 100 -15.5 -2.77787 | opp_overlap 1265903, overlap 1265895 1265903 AATAGTACTGGAAAC TTTAAAACCATATGCTA GTT TTGCATATGGTTTTAAA AATTAGGCATCTGTT TERM 1645 1265903 - 1265925 + r 85 -9.2 -4.14392 | opp_overlap 1265903 1265896 1265895 CTGGAAACTTTAAAA CCATATGCTA GTT TTGCATATGG TTTTAAAAATTAGGC TERM 1646 1265925 - 1265903 - R 88 -9.2 -4.24002 | opp_overlap 1265903, overlap 1265896 1265895 CTGGAAACTTTAAAA CCATATGCTA GTT TTGCATATGG TTTTAAAAATTAGGC SAK_1293 1268499 - 1265935 - | hydrophobic W repeat-containing protein TERM 1647 1267106 - 1267122 + g 71 -5.1 -4.60041 | opp_overlap 1267105 1267104 1267121, overlap 1267108 1267121 TGGCCTTCCAAAACC GTTGGTT GCC AACCATC TTTTTGAAGATAAGT TERM 1648 1268620 - 1268634 + r 72 -8.6 -3.04075 | opp_overlap 1268620 1268623, overlap 1268619 1268607 TATATGCCAAAAAAA CCACTT AAA AAGTGG CTTCTTTAGTATATT TERM 1649 1268634 - 1268620 - R 100 -8.6 -5.45726 | opp_overlap 1268619 1268607 1268620, overlap 1268623 TATATGCCAAAAAAA CCACTT AAA AAGTGG CTTCTTTAGTATATT recJ 1270849 - 1268651 - | single-stranded-DNA-specific exonuclease RecJ TERM 1650 1270553 - 1270580 + g 85 -12.9 -2.64735 | AGCTTCTTTCATGAT TGATGCTGATG TCATTC CATCAGCATCA TAGTCTCCATAAACT TERM 1651 1270745 - 1270767 + g 70 -5.7 -4.38305 | gap 1, opp_overlap 1270745 1270744 1270748 1270749 ACCTCGCGAATAAAT TAAG-GAAGC CACC GCTTCACTTA TCTTTTCTTTTTTTG TERM 1652 1270791 - 1270813 + g 73 -9.2 -2.76696 | opp_overlap 1270796, overlap 1270796 TTTTTTGAAGCCTCA AAAAAGCCAG CGT CTGGCTTTTG GTTATTGAGGACCCA TERM 1653 1270808 - 1270796 - G 100 -9.1 -5.055 | opp_overlap 1270791 1270796 TGAAGCCTCAAAAAA GCCAG CGT CTGGC TTTTGGTTATTGAGG TERM 1654 1270796 - 1270808 + g 90 -9.1 -4.56133 | opp_overlap 1270796, overlap 1270791 TGAAGCCTCAAAAAA GCCAG CGT CTGGC TTTTGGTTATTGAGG SAK_1295 1271607 - 1270846 - | short chain dehydrogenase/reductase family oxidoreductase rnz 1272538 - 1271609 - | ribonuclease Z SAK_1297 1273227 - 1272580 - | hypothetical protein SAK_1298 1274458 - 1273220 - | GTP-binding protein miaA 1275439 - 1274549 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1655 1275037 - 1275049 + g 71 -4.9 -4.59773 | ATAAATCTTCATCAC TTAGA GAC TCTAA TTTTTCACGATAGGC TERM 1656 1275615 - 1275627 + G 74 -7.7 -3.83026 | AACAGCTGCTACTCT TGCAG GTG CTGCA TTTGCTATCAAAAAA SAK_1300 1275550 - 1275726 + | hypothetical protein TERM 1657 1275731 - 1275760 + T 100 -16.7 -4.7033 | opp_overlap 1275731 1275734 TCTCTCATTAAACAA TAACTCCCTTACT AGCT AGTAAGGGAGTTA TTTTATATTAAATTG TERM 1658 1275760 - 1275731 - T 100 -16.7 -4.00042 | opp_overlap 1275731, overlap 1275734 TCTCTCATTAAACAA TAACTCCCTTACT AGCT AGTAAGGGAGTTA TTTTATATTAAATTG TERM 1659 1275757 - 1275734 - T 100 -14 -4.12603 | opp_overlap 1275731, overlap 1275731 CTCATTAAACAATAA CTCCCTTACT AGCT AGTAAGGGAG TTATTTTATATTAAA SAK_1301 1276685 - 1275768 - | hypothetical protein TERM 1660 1276222 - 1276208 - G 70 -2.9 -5.2422 | opp_overlap 1276208 1276216 AACCATACCAAAAAA CTATT TTCCC AATAG TGAATTGTCCACTAA TERM 1661 1276498 - 1276483 - G 72 -7.6 -3.78419 | opp_overlap 1276483, overlap 1276476 GTAGTAAAGACAGAA GCAATC AAAG GATTGC TTAACTCCTTCCTGC TERM 1662 1276649 - 1276667 + g 78 -6.7 -4.67168 | GCCCTAATACTAATC CCGCCAT CACTA ATGGTGG TTTTTCCCAATTTTT TERM 1663 1276768 - 1276791 + r 91 -8.2 -5.09173 | opp_overlap 1276768 TTAACTTAATGAAAA GAAGCTAGTC CATT GACTAACTTC TTTTTTAAGCTCTTC TERM 1664 1276791 - 1276768 - R 95 -10.4 -4.45664 | opp_overlap 1276768 TTAACTTAATGAAAA GAAGCTAGTC CATT GACTAACTTC TTTTTTAAGCTCTTC SAK_1302 1280577 - 1276819 - | pullulanase, extracellular TERM 1665 1278033 - 1278057 + g 79 -10.7 -3.18681 | opp_overlap 1278029, overlap 1278038 ACTTCATCCAATCTT GGTCAGCTGGT TTA ACCGGCTTACC TTGATCACCTTGGAA TERM 1666 1280736 - 1280697 - R 87 -11 -3.47416 | opp_overlap 1280707 1280728, overlap 1280707 AAACTATCAATAACA TTACAAAAAAGCTAAGCA ATAT TGCCTAGCTTTTTTATCA AAAATTTCCTCATAT TERM 1667 1280707 - 1280726 + r 84 -6.4 -5.24531 | opp_overlap 1280697 1280707 TAACATTACAAAAAA GCTAAGCA ATAT TGCCTAGC TTTTTTATCAAAAAT TERM 1668 1280726 - 1280707 - R 100 -8.6 -5.36965 | opp_overlap 1280707, overlap 1280697 TAACATTACAAAAAA GCTAAGCA ATAT TGCCTAGC TTTTTTATCAAAAAT SAK_1303 1281480 - 1280746 - | hypothetical protein TERM 1669 1281078 - 1281063 - G 73 -6.8 -4.22346 | CAAAGTGAGCTAAAA CGTGCG CTTC CACACG GCCTATGGCAAATTC SAK_1304 1282079 - 1281495 - | hypothetical protein TERM 1670 1282026 - 1282042 + g 74 -3.7 -5.24551 | overlap 1282027 ATTTTCTGTATAATT TTGATTC TGT GAATCAC TTTTTATTGCTTTAA pepV 1283582 - 1282176 - | dipeptidase PepV SAK_1306 1284231 - 1283629 - | nitroreductase family protein TERM 1671 1283861 - 1283849 - G 72 -7.7 -3.65529 | opp_overlap 1283848 ATACCTGCATTTAAA GAGAG ATA CTCTC CAGTTTGTTTTTCAC TERM 1672 1284056 - 1284069 + g 100 -6.7 -6.09888 | CTTTCCGGTAAACCT TCTGC TAGA GCAGA TTTTTTTTCTTGGAC TERM 1673 1284767 - 1284754 - g 74 -2.5 -5.40072 | TCTTTCCTAAAAAAA TAAAA TCAC TTTTA GGACCACAGCTAATT SAK_1307 1284549 - 1286183 + | glycerophosphoryl diester phosphodiesterase family protein TERM 1674 1286232 - 1286185 - T 87 -10.3 -3.57971 | opp_overlap 1286197, overlap 1286186 1286196 1286197 ATAGCGAGGGTTAAA TTAAATAAAAAGCTTAGTAGA TACTGT TCTACTAAGTTTTTTATTTAG GAGGATCATTAAGAG TERM 1675 1286231 - 1286186 - T 100 -13.8 -2.74461 | opp_overlap 1286197, overlap 1286185 1286196 1286197 TAGCGAGGGTTAAAT TAAATAAAAAGCTTAGTAGA TACTGT TCTACTAAGTTTTTTATTTA GGAGGATCATTAAGA TERM 1676 1286221 - 1286196 - T 82 -4.8 -5.41941 | opp_overlap 1286197, overlap 1286186 1286185 1286197 TAAATTAAATAAAAA GCTTAGTAGA TACTGT TCTACTAAGT TTTTTATTTAGGAGG TERM 1677 1286197 - 1286220 + T 100 -8.3 -5.63517 | opp_overlap 1286197 1286196 1286186 1286185 AAATTAAATAAAAAG CTTAGTAGA TACTGT TCTACTAAG TTTTTTATTTAGGAG TERM 1678 1286220 - 1286197 - T 77 -8.3 -3.82724 | opp_overlap 1286197, overlap 1286196 1286186 1286185 AAATTAAATAAAAAG CTTAGTAGA TACTGT TCTACTAAG TTTTTTATTTAGGAG uvrC 1288006 - 1286225 - | excinuclease ABC subunit C SAK_1309 1288166 - 1288933 + | hypothetical protein TERM 1679 1288945 - 1288965 + T 74 -4 -5.22312 | opp_overlap 1288945, overlap 1288947 GTAAATGATAAAAAA GACTTAGT AAAGA ACTAAGCC TTTTTTGGTATAAAT TERM 1680 1288965 - 1288945 - T 88 -6.2 -5.42265 | opp_overlap 1288945 1288947 GTAAATGATAAAAAA GACTTAGT AAAGA ACTAAGCC TTTTTTGGTATAAAT SAK_1310 1290332 - 1288992 - | MATE efflux family protein TERM 1681 1289578 - 1289564 - G 71 -5 -4.63527 | opp_overlap 1289555 CTACTACTGCAAAAA TTGCAA CTT CTGCAA AAATTTGTAAACCAA TERM 1682 1289653 - 1289665 + g 71 -4.9 -4.55128 | ATTCTTTCCAGAGTC CATAT ATG ATATG TTTTAATTTGAGGAT TERM 1683 1290427 - 1290406 - R 88 -7.3 -5.09225 | ATGCTATTTAAAAAA GGCTGAGAA ATAA TCCTCAACC CCATTTTAGCTAAGC SAK_1311 1290843 - 1290433 - | hypothetical protein SAK_1312 1291350 - 1290853 - | hypothetical protein SAK_1313 1291572 - 1292168 + | hypothetical protein TERM 1684 1292283 - 1292236 - f 74 -7.2 -4.11394 | opp_overlap 1292245, overlap 1292245 ATTCCAGCTGTAAAA TAGCAAGAACCCTCCTAAGT TCATTAAG ACTTAGGAGGGTTTTTATCA ATATGAATAGGTTAC TERM 1685 1292274 - 1292245 - f 100 -12.3 -3.89411 | opp_overlap 1292245, overlap 1292236 GTAAAATAGCAAGAA CCCTCCTAAGT TCATTAAG ACTTAGGAGGG TTTTTATCAATATGA TERM 1686 1292245 - 1292274 + F 100 -13 -4.89852 | opp_overlap 1292245 1292236 GTAAAATAGCAAGAA CCCTCCTAAGTT CATTAA GACTTAGGAGGG TTTTTATCAATATGA SAK_1314 1292358 - 1292648 + | ISSag4, transposase orfA SAK_1315 1292684 - 1293463 + | ISSag4, transposase orfB TERM 1687 1293679 - 1293642 - f 83 -4.3 -5.58522 | gap 1, opp_overlap 1293642 1293637 GAGACAAAAGAAAAA CACTCCTG-TTGAAATTT AGT AAACTAGAAACAGGAGTG TTTTATTATGGTTAA SAK_1316 1293687 - 1293977 + | hypothetical protein SAK_1318 1297765 - 1295297 - | streptococcal histidine triad family protein TERM 1688 1296274 - 1296298 + g 74 -2.9 -5.33026 | overlap 1296275 TTGTTACTTTGCGAC TCACTTTTTTA GTG TCAAAGAGTGG TTTTTCTTTGCCTTG TERM 1689 1297008 - 1297024 + g 76 -6.5 -4.44608 | opp_overlap 1297007 GGGCGGTAATCAGAC GGTCTAG CAC CTCGACC TTGTTTTTGACTCCA TERM 1690 1297292 - 1297302 + g 73 -5.4 -4.62669 | overlap 1297297 AGTTCCTTTGGCTAC TTGC TCA GCAA TTTGTTGTTTGGTTC lmb 1298698 - 1297778 - | laminin-binding surface protein TERM 1691 1297841 - 1297865 + g 81 -11.5 -2.65274 | overlap 1297840 TAGATATGTCTTGTT TCCGCTTGGAG CAG CTTCAAGTGGA CTTAATGTCTTTACT TERM 1692 1298331 - 1298356 + g 89 -10.5 -4.14392 | TCCATATCTTCTAGC CCTTTGACTCT ATCT AGTGTCAAAGG TTTTGACGCTTCAAA TERM 1693 1298376 - 1298386 + g 81 -4 -5.53288 | opp_overlap 1298376 GACGCTTCAAACACA TCAA CCT TTGA TTTTTTTAAATTAGG TERM 1694 1298877 - 1298903 + r 100 -16.8 -3.0792 | opp_overlap 1298877, overlap 1298879 1298881 1298883 GCACATATAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 1695 1298903 - 1298877 - R 100 -16.8 -5.76633 | opp_overlap 1298877 1298879 1298881 1298883 GCACATATAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 1696 1298879 - 1298901 + r 100 -15 -3.09505 | opp_overlap 1298877, overlap 1298877 1298881 1298883 ACATATAAAAAAATA GAGAGAACCA AAT TGGTTCTCTC TATTAAATAAGCTCT TERM 1697 1298881 - 1298899 + r 89 -11.8 -3.10522 | opp_overlap 1298877, overlap 1298879 1298877 1298883 ATATAAAAAAATAGA GAGAACCA AAT TGGTTCTC TCTATTAAATAAGCT TERM 1698 1298883 - 1298897 + r 72 -8.6 -3.11072 | opp_overlap 1298877, overlap 1298881 1298879 1298877 ATAAAAAAATAGAGA GAACCA AAT TGGTTC TCTCTATTAAATAAG scpB 1302386 - 1298934 - | C5a peptidase ScpB TERM 1699 1299512 - 1299523 + g 72 -3.6 -5.00138 | TACGCTCACGGTAAA CCGG TTGG CTGG TTTTTGGTTTAGATG TERM 1700 1301039 - 1301063 + g 70 -6.5 -4.15565 | TGATGGTTTTTTGGG GATTGTCTTTT AAT AAGAGACCATC TTTTCGACTGATAAA TERM 1701 1302459 - 1302438 - R 100 -11.7 -4.73613 | opp_overlap 1302437 1302434 1302442 TGACCATTAAGAAAA GAGAGAATC AAAC GATTCTCTC CTAGTTATCCATCTG TERM 1702 1302722 - 1302701 - R 100 -13.1 -4.46926 | opp_overlap 1302701 TATTCTATCATAAAA GAGAGAACC GATC GGTTCTCTC TTGATGTTCACTCAG TERM 1703 1302701 - 1302722 + r 100 -13.1 -3.38072 | opp_overlap 1302701 TATTCTATCATAAAA GAGAGAACC GATC GGTTCTCTC TTGATGTTCACTCAG TERM 1704 1302893 - 1302917 + r 77 -3.8 -5.34632 | gap 1, opp_overlap 1302893 1302894, overlap 1302893 1302894 1302913 AACATGCAAAAAAAC G-CTAAAAATA AAGG TATTTTTAGAC TTTTTCTATTTTGTT SAK_1321 1303948 - 1302923 - | hypothetical protein TERM 1705 1303609 - 1303591 - G 74 -7.6 -3.98661 | opp_overlap 1303582 1303591 1303586 1303585 CATAGTTATTATAAA TATAATCT AAA AGATTATA TTTAGCTTTATCATA TERM 1706 1303591 - 1303609 + g 74 -7.6 -3.90286 | opp_overlap 1303591, overlap 1303582 1303586 1303585 CATAGTTATTATAAA TATAATCT AAA AGATTATA TTTAGCTTTATCATA SAK_1322 1304188 - 1304478 + | ISSag4, transposase orfA TERM 1707 1305204 - 1305257 + G 81 -7 -4.60487 | gap 1, opp_overlap 1305205 1305212, overlap 1305205 GAACTAGCTCTTAAG ACTGAAAAGGCAACACTTTTCTGTA CAACA TTTATAAA-GTGTTGCCTTTTCAGG TTTTTACCAATGCTA TERM 1708 1305205 - 1305256 + G 80 -10.5 -3.3581 | gap 1, opp_overlap 1305205 1305212, overlap 1305204 AACTAGCTCTTAAGA CTGAAAAGGCAACACTTTTCTGTA CAACA TTTATAAA-GTGTTGCCTTTTCAG GTTTTTACCAATGCT TERM 1709 1305256 - 1305205 - g 79 -11.2 -3.03619 | opp_overlap 1305204 1305205, overlap 1305212 AACTAGCTCTTAAGA CTGAAAAGGCAACACTTTTC TGTACAACATTT ATAAAGTGTTGCCTTTTCAG GTTTTTACCAATGCT SAK_1323 1304514 - 1305275 + | ISSag4, transposase orfB SAK_1324 1307215 - 1305401 - | DNA polymerase III epsilon subunit family exonuclease TERM 1710 1306517 - 1306533 + g 78 -3.8 -5.30199 | opp_overlap 1306527, overlap 1306527 TGGAGAAATTTTGTT GTTTTT AGAAG AAAAAC TTTTTCTTGATTTTT TERM 1711 1307492 - 1307445 - H 100 -15.6 -3.68962 | gap 1, opp_overlap 1307453 1307454 CCTTAATATATATAA TTATAGTACTATTTTTAAAATAT TGA AT-TTTTAAAAATAGTACTATAA GATAAAAAACTATCT TERM 1712 1307533 - 1307553 + H 71 -5.6 -4.69027 | TATTATTTTGTACTT GATATTAA ACCTG TTAATATC TTTTTAAATAAATTT SAK_1325 1307631 - 1308866 + | hypothetical protein TERM 1713 1308873 - 1308898 + T 100 -17.7 -3.86194 | opp_overlap 1308873 CCATATTAAACAAAA CACCCCCACAA AATA TTGTGGGGGTG TTTGTGGGGAAGATT TERM 1714 1308898 - 1308873 - T 100 -17.7 -4.97158 | opp_overlap 1308873 CCATATTAAACAAAA CACCCCCACAA AATA TTGTGGGGGTG TTTGTGGGGAAGATT TERM 1715 1308905 - 1308928 + T 100 -10.4 -5.16237 | GTGGGGGTGTTTGTG GGGAAGATTC AATT GAATCTTTCC TTTTTTAATCGCCTT SAK_1326 1310249 - 1309068 - | phage integrase family site specific recombinase TERM 1716 1309675 - 1309685 + g 88 -5.4 -5.52909 | opp_overlap 1309675 TCCCGTAGGTCAAAG GTAG CGA CTAC TTTTTTTAAGTCTTC SAK_1327 1311070 - 1310504 - | plasmid replication protein TERM 1717 1311202 - 1311152 - R 91 -12.1 -3.48994 | gap 2, opp_overlap 1311156, overlap 1311156 TAAAAACAGTTATAA GAAAGAGTGGTGCTTTTGGCTTTCA CTT CGTGAGCC-AA-GCACCACTCTTTC CCTTACCGTTTAGTA TERM 1718 1311156 - 1311198 + r 79 -8.6 -3.77241 | gap 2, opp_overlap 1311152 1311156 AACAGTTATAAGAAA GAGTGGTGCTTTTGGCTTTC ACTTC GTGAGCCA-A-GCACCACTC TTTCCCTTACCGTTT TERM 1719 1311198 - 1311156 - R 79 -7.1 -4.35091 | gap 2, opp_overlap 1311156, overlap 1311152 AACAGTTATAAGAAA GAGTGGTGCTTTTGGCTTTCA CTT CGTGAGCC-AA-GCACCACTC TTTCCCTTACCGTTT TERM 1720 1311275 - 1311287 + r 74 -6.3 -4.35339 | overlap 1311271 AAATAATACTTGGGA TTTCG GCT CGAAA TTTCTTCCTTGATAT TERM 1721 1311801 - 1311811 + r 71 -5.4 -4.73108 | overlap 1311793 GTTAAACGTTTTTTG GAAG AAA CTTC TTTTCATTTTATAAA TERM 1722 1311868 - 1311896 + r 87 -10.5 -3.75153 | opp_overlap 1311870 ACAAAGGAGTGGCAA TACTTGATAAGGA TGT TCGTTATCAAGTA TTTGAATTAAGCCAG TERM 1723 1311894 - 1311870 - R 72 -8.7 -3.05536 | opp_overlap 1311868 AAAGGAGTGGCAATA CTTGATAAGGA TGT TCGTTATCAAG TATTTGAATTAAGCC TERM 1724 1312763 - 1312748 - R 79 -10.4 -2.57003 | opp_overlap 1312762, overlap 1312747 1312745 TCATCAATAATATAT CCCGCT GGTA AGCGGG GAAGAAAGAGAAATC TERM 1725 1312867 - 1312838 - R 74 -8.7 -3.21276 | gap 1, opp_overlap 1312845 TCCCCTTGCATAAGA GCTCCA-AGTCCCA TAT TGAGACTTTGAAGC AGATACTGTGACAAT SAK_1330 1313210 - 1312896 - | hypothetical protein TERM 1726 1313431 - 1313406 - R 85 -8.3 -4.73108 | opp_overlap 1313406 TGGACAAAATGAAAA CGGACAAGTAC TCCT GTAACTGTCCG TTTAATAATTTGGTT SAK_1331 1314650 - 1313445 - | hypothetical protein SAK_1332 1315193 - 1314702 - | hypothetical protein SAK_1333 1318818 - 1315207 - | type IIG restriction enzyme and methyltransferase TERM 1727 1318009 - 1318025 + g 73 -7.3 -4.15044 | overlap 1318010 GCGTGAAATAATTTT TGAAGTC CCT GACTTCG TTTCTTCCAGCCCCA TERM 1728 1318010 - 1318024 + g 70 -8.6 -3.08812 | overlap 1318009 CGTGAAATAATTTTT GAAGTC CCT GACTTC GTTTCTTCCAGCCCC TERM 1729 1318887 - 1318860 - R 77 -10.1 -2.68419 | opp_overlap 1318851, overlap 1318882 1318884 TAAGAACTGATAGTA TTAGTCTATTG TGTAAG CAATAGACTAA GGGTACCCTTAGCGA TERM 1730 1318963 - 1318927 - R 100 -19.7 -4.0348 | opp_overlap 1318932 1318962, overlap 1318932 ATATTATATCATAAA TAAAACCCCACCAAGAT TTA ATCTTGGTGGGGTTTTG GTGGGGAATGATAAC TERM 1731 1318958 - 1318932 - R 100 -19.6 -5.03227 | opp_overlap 1318932, overlap 1318927 ATATCATAAATAAAA CCCCACCAAGAT TTA ATCTTGGTGGGG TTTTGGTGGGGAATG TERM 1732 1318932 - 1318958 + r 100 -19.6 -4.2558 | opp_overlap 1318927 1318932 ATATCATAAATAAAA CCCCACCAAGAT TTA ATCTTGGTGGGG TTTTGGTGGGGAATG rplL 1319424 - 1319059 - | 50S ribosomal protein L7/L12 rplJ 1319988 - 1319488 - | 50S ribosomal protein L10 TERM 1733 1320054 - 1320033 - H 79 -3.7 -5.65177 | ATAGGCACAAAAAAA TCGCACCTA AACC TAGACACGA AAGTACAATACGTTA TERM 1734 1320275 - 1320231 - H 84 -6.1 -5.20216 | opp_overlap 1320231 TATAGTACCAAAAAA TACTAAAATAGTTATCTTTTA TAT CAAAAAATTAATATTTTAGTA TTTATTTATTGACCT TERM 1735 1320888 - 1320878 - g 72 -4 -4.91852 | GCTATCAAAAATAAA GAAA TCA TTTC GATAGATATCTCTAG TERM 1736 1321438 - 1321428 - g 70 -3.2 -4.96501 | CCTTAGAAAAAGAAA TCGC TGC GCAA AGAGACAAGCAAGAA clpL 1320422 - 1322530 + | ATP-dependent Clp protease, ATP-binding subunit ClpL TERM 1737 1322567 - 1322534 - T 100 -11.1 -5.19879 | opp_overlap 1322539, overlap 1322539 TCTGAAAGATAAAAA CAAAACCCGTTTGGA AGAA TCCAAGCGGGTTTTC TAGTGGATTGAAAAA TERM 1738 1322539 - 1322562 + T 100 -13.2 -4.48741 | opp_overlap 1322539 1322534 AAGATAAAAACAAAA CCCGTTTGGA AGAA TCCAAGCGGG TTTTCTAGTGGATTG TERM 1739 1322562 - 1322539 - T 100 -11 -5.40873 | opp_overlap 1322539, overlap 1322534 AAGATAAAAACAAAA CCCGTTTGGA AGAA TCCAAGCGGG TTTTCTAGTGGATTG mmuM 1323568 - 1322624 - | homocysteine methyltransferase TERM 1740 1322689 - 1322701 + g 84 -7.7 -4.60041 | opp_overlap 1322689 AACAACCTCCGACAA CTTGG GCG CCAAG TTTTTGCCAGTCACT SAK_1338 1324949 - 1323573 - | amino acid permease TERM 1741 1324679 - 1324669 - G 76 -6.8 -4.43681 | CAGGCAACAGTAAAA CCTG TGC CAGG ACTGATAAACTTAGT SAK_1339 1325729 - 1325079 - | hypothetical protein SAK_1340 1326210 - 1325887 - | hypothetical protein TERM 1742 1327034 - 1327070 + G 100 -17.6 -4.91511 | gap 1, opp_overlap 1327034 TTAAAAAATAAAAAA GAGCTTTGCAGTAGTCT CAAC AG-CTACTGCAAAGCTC TTTTTGTCATAAACT TERM 1743 1327070 - 1327034 - g 100 -17.6 -6.04324 | gap 1, opp_overlap 1327034 TTAAAAAATAAAAAA GAGCTTTGCAGTAGTCT CAAC AG-CTACTGCAAAGCTC TTTTTGTCATAAACT SAK_1341 1326482 - 1327111 + | TetR family transcriptional regulator SAK_1342 1327688 - 1327092 - | GTPase EngB clpX 1328925 - 1327699 - | ATP-dependent protease ATP-binding subunit SAK_1344 1328986 - 1329132 + | hypothetical protein folA 1329637 - 1329143 - | dihydrofolate reductase TERM 1744 1329191 - 1329171 - G 81 -8.3 -4.35116 | opp_overlap 1329171 1329174, overlap 1329174 TATGTCACAGTAAAA GCATGAGCA TTC TGCTCATCC TTTTCAAAATAATCT TERM 1745 1329171 - 1329191 + g 79 -8.3 -4.12456 | opp_overlap 1329171 1329174, overlap 1329174 TATGTCACAGTAAAA GCATGAGCA TTC TGCTCATCC TTTTCAAAATAATCT TERM 1746 1329174 - 1329188 + g 70 -8.6 -3.09004 | opp_overlap 1329174 1329171, overlap 1329171 GTCACAGTAAAAGCA TGAGCA TTC TGCTCA TCCTTTTCAAAATAA TERM 1747 1329188 - 1329174 - G 71 -8.6 -3.16202 | opp_overlap 1329171 1329174, overlap 1329171 GTCACAGTAAAAGCA TGAGCA TTC TGCTCA TCCTTTTCAAAATAA thyA 1330556 - 1329717 - | thymidylate synthase TERM 1748 1329822 - 1329801 - G 74 -2.9 -5.27779 | opp_overlap 1329804, overlap 1329803 TTTAATATCAAAAAA GTCTGTTCC ATCT GGAACATTC AATACTAGTTTGGGG SAK_1347 1330710 - 1331882 + | hydroxymethylglutaryl-CoA synthase SAK_1348 1331884 - 1333167 + | hydroxymethylglutaryl-CoA reductase, degradative TERM 1749 1333146 - 1333200 + F 77 -9 -3.29324 | opp_overlap 1333142 1333141 1333160, overlap 1333160 TGTCAATAAACTTAC TAAAAGTAAAAAAAGAATTTGAGA AAAATCA TCTCAAATTCTTTTTTTACTTGAC TTGAATTTCCATAAG TERM 1750 1333186 - 1333160 - f 100 -8.2 -5.79588 | opp_overlap 1333160 1333146 CTAAAAGTAAAAAAA GAATTTGAGA AAAATCA TCTCAAATTC TTTTTTTACTTGACT TERM 1751 1333160 - 1333186 + F 100 -8.2 -5.64006 | opp_overlap 1333160, overlap 1333146 CTAAAAGTAAAAAAA GAATTTGAGA AAAATCA TCTCAAATTC TTTTTTTACTTGACT SAK_1349 1333259 - 1333708 + | hypothetical protein SAK_1350 1333713 - 1334357 + | hemolysin III SAK_1351 1334444 - 1335358 + | hypothetical protein TERM 1752 1335366 - 1335410 + F 100 -8.9 -5.59534 | gap 1, opp_overlap 1335361 1335366 1335369 TACCATAATATAAAA GGACCTAGACATA-AGTATT AGAGTA AATACTATCTGTCTAGGTTC TTTTTTGTTATACTT TERM 1753 1335410 - 1335366 - f 83 -6.7 -4.75289 | gap 1, opp_overlap 1335366, overlap 1335361 1335369 TACCATAATATAAAA GGACCTAGACATA-AGTATT AGAGTA AATACTATCTGTCTAGGTTC TTTTTTGTTATACTT TERM 1754 1336017 - 1336027 + G 73 -6.8 -4.24342 | AAAGAACACTTACTA GGAC AAC GTCC TTTCTTGCTCGGAGA SAK_1352 1335459 - 1336313 + | hypothetical protein TERM 1755 1336315 - 1336354 + T 100 -18.2 -2.82516 | opp_overlap 1336315 1336323, overlap 1336323 AATGGGAAAAATAAA GCTAAAAAGCTAAGGC AATTCACA GCCTTAGCTTTTTAGC TATACTAGTCCAAAG TERM 1756 1336354 - 1336315 - T 100 -18.2 -4.88293 | opp_overlap 1336315 1336323, overlap 1336323 AATGGGAAAAATAAA GCTAAAAAGCTAAGGC AATTCACA GCCTTAGCTTTTTAGC TATACTAGTCCAAAG TERM 1757 1336346 - 1336323 - T 90 -8.2 -4.88295 | opp_overlap 1336323 1336315, overlap 1336315 AAATAAAGCTAAAAA GCTAAGGC AATTCACA GCCTTAGC TTTTTAGCTATACTA TERM 1758 1336323 - 1336346 + T 85 -8.2 -4.7173 | opp_overlap 1336315 1336323, overlap 1336315 AAATAAAGCTAAAAA GCTAAGGC AATTCACA GCCTTAGC TTTTTAGCTATACTA SAK_1353 1336577 - 1336359 - | hypothetical protein fni 1337640 - 1336645 - | isopentenyl pyrophosphate isomerase SAK_1355 1338629 - 1337637 - | phosphomevalonate kinase mvaD 1339566 - 1338622 - | diphosphomevalonate decarboxylase mvk 1340426 - 1339548 - | mevalonate kinase TERM 1759 1340150 - 1340131 - G 71 -8.6 -3.16689 | overlap 1340129 AAAACTGCACGAATA GCTGCAAT AGCA ACTGCAGC TGATGATCCCATACC TERM 1760 1340539 - 1340510 - R 100 -10.9 -4.37544 | opp_overlap 1340510 1340508 TGATAATAACATAAA TTAAAGGAACTAC AATT GCAGTCCCTTTAA TCTTAAATGTAAATG SAK_1358 1341771 - 1340542 - | sensor histidine kinase TERM 1761 1341740 - 1341720 - G 90 -9.1 -4.37507 | overlap 1341717 AAAATAAAACAACAA GAATAGCTA GCG CAGCTATTC CGATAAAACGAAGTC SAK_1359 1342457 - 1341771 - | DNA-binding response regulator SAK_1360 1343085 - 1342459 - | RelA/SpoT domain-containing protein SAK_1361 1344947 - 1343193 - | efflux ABC transporter, permease/ATP-binding protein TERM 1762 1343434 - 1343414 - G 71 -9.1 -3.15544 | overlap 1343416 CTGTACGTGTATCAA CAGATGAAG TTG CTTCATCTA AGATAAGTAAGGGAG TERM 1763 1343432 - 1343416 - G 75 -9.5 -3.14051 | overlap 1343414 GTACGTGTATCAACA GATGAAG TTG CTTCATC TAAGATAAGTAAGGG TERM 1764 1344000 - 1343990 - G 70 -3.2 -4.92239 | TTAAAAATTCAAAAA CACG TCC CATG GCTGCACTAGCAGAC SAK_1362 1346754 - 1344937 - | efflux ABC transporter, permease/ATP-binding protein TERM 1765 1345893 - 1345881 - G 70 -3.4 -5.02074 | opp_overlap 1345892, overlap 1345884 CCATGTTTGAAAAAA GATC CACTC GATC AGTGATAGCTGATTT TERM 1766 1346165 - 1346147 - G 75 -9.6 -3.12749 | opp_overlap 1346145 1346147, overlap 1346139 1346136 CGAATAACTCTAACA CCAGAGAG TGC CTCTCTAG TAGTTGCATTAAGCG SAK_1363 1347241 - 1346801 - | MarR family transcriptional regulator SAK_1364 1347510 - 1349582 + | Ser/Thr protein phosphatase family protein TERM 1767 1349629 - 1349571 - T 81 -3.2 -5.7827 | gap 4, opp_overlap 1349589, overlap 1349589 AATACAAAGAAAAAA CATATGAAATAATAAAAATAGGTTTGGATA AAA TATCCAAACCTATTTTTAT-A--TCA-ATA TGCCTTCCAAATGAT TERM 1768 1349589 - 1349615 + T 100 -15.4 -4.99638 | opp_overlap 1349571 1349589 ATGAAATAATAAAAA TAGGTTTGGATA AAA TATCCAAACCTA TTTTTATATCAATAT TERM 1769 1349615 - 1349589 - T 100 -15.4 -5.39905 | opp_overlap 1349589, overlap 1349571 ATGAAATAATAAAAA TAGGTTTGGATA AAA TATCCAAACCTA TTTTTATATCAATAT def 1350029 - 1349619 - | peptide deformylase gdhA 1351448 - 1350099 - | glutamate dehydrogenase SAK_1367 1351616 - 1352125 + | hypothetical protein TERM 1770 1352144 - 1352128 - T 74 -6.5 -4.36411 | opp_overlap 1352128 TATTAATTATTAAAA GGACATG TTT CGTGTCC TTTTTTTATCTATTG TERM 1771 1352128 - 1352144 + T 100 -8.7 -5.80248 | opp_overlap 1352128 TATTAATTATTAAAA GGACATG TTT CGTGTCC TTTTTTTATCTATTG SAK_1368 1353935 - 1352166 - | ABC transporter, ATP-binding/permease protein TERM 1772 1352410 - 1352390 - G 71 -9.1 -3.15579 | overlap 1352392 CCAACCTTGTATCAA CAGATGAAG TCG CTTCATCTA AAATTAAAATTTTAG TERM 1773 1352408 - 1352392 - G 75 -9.5 -3.13899 | overlap 1352390 AACCTTGTATCAACA GATGAAG TCG CTTCATC TAAAATTAAAATTTT SAK_1369 1355679 - 1353940 - | ABC transporter, ATP-binding/permease protein SAK_1370 1356219 - 1355746 - | acetyltransferase SAK_1371 1358084 - 1356216 - | ABC transporter, ATP-binding protein papS 1359288 - 1358095 - | tRNA CCA-pyrophosphorylase TERM 1774 1359286 - 1359266 - G 100 -14.1 -3.6106 | opp_overlap 1359263 TTTAATATTGGTAAA GCCTTCTGA AAC TCAGAAGGC AAATAATTTAATCTC SAK_1373 1360336 - 1359488 - | DegV family protein SAK_1374 1360716 - 1360336 - | hypothetical protein TERM 1775 1360565 - 1360549 - G 73 -5.9 -4.52415 | ACGTACAATAACAAA TTGTAAC ACT GCTACAA TGCTCGTTACTTTTG SAK_1375 1361321 - 1360788 - | hypothetical protein TERM 1776 1361355 - 1361336 - R 95 -8.6 -5.15634 | TATTGTAGCAAAAAA GCGCTTAT AAAA ACAAGCGC TAAGGCATGGGGGAA SAK_1376 1361866 - 1361372 - | hypothetical protein SAK_1377 1364019 - 1362055 - | PTS system, fructose-specific IIABC component SAK_1378 1364927 - 1364016 - | 1-phosphofructokinase, putative SAK_1379 1365667 - 1364924 - | DeoR family transcriptional regulator TERM 1777 1365784 - 1365766 - R 72 -2.5 -5.46129 | gap 1, opp_overlap 1365767 1365768, overlap 1365767 1365768 CAATAAACTAAAAAA GCCTAATC TAAA GATTA-GC TTTTACAAATACTTT SAK_1380 1367033 - 1365798 - | beta-lactam resistance factor TERM 1778 1367149 - 1367180 + r 81 -10.4 -2.82327 | opp_overlap 1367149 1367154, overlap 1367154 ACACACATAATATTA GTAAAGCTAAATCT AAAA AGATTTAGCTTTAA ATTTCAATATAGCGA TERM 1779 1367180 - 1367149 - R 81 -10.4 -2.85109 | opp_overlap 1367149 1367154, overlap 1367154 ACACACATAATATTA GTAAAGCTAAATCT AAAA AGATTTAGCTTTAA ATTTCAATATAGCGA TERM 1780 1367154 - 1367175 + r 89 -10.3 -3.86311 | opp_overlap 1367154 1367149, overlap 1367149 CATAATATTAGTAAA GCTAAATCT AAAA AGATTTAGC TTTAAATTTCAATAT TERM 1781 1367175 - 1367154 - R 89 -10.3 -3.8572 | opp_overlap 1367149 1367154, overlap 1367149 CATAATATTAGTAAA GCTAAATCT AAAA AGATTTAGC TTTAAATTTCAATAT SAK_1381 1368811 - 1367177 - | bsp protein TERM 1782 1369015 - 1368997 - R 77 -4.5 -5.2422 | opp_overlap 1368997 AAGCATATCAAAAAA CCGGG CACTATTCT CCCGG TTGATTATTATTTTA panE 1369946 - 1369023 - | 2-dehydropantoate 2-reductase SAK_1383 1371029 - 1369959 - | hypothetical protein SAK_1384 1372158 - 1371166 - | pyridine nucleotide-disulphide oxidoreductase family protein trmD 1372894 - 1372139 - | tRNA (guanine-N(1)-)-methyltransferase rimM 1373399 - 1372881 - | 16S rRNA-processing protein TERM 1783 1373455 - 1373434 - R 90 -5.8 -5.70761 | AAAATAAAAGAAAAA CCAGCCGC TAAAAT GCAACTGG CCACGATAGTCCGTA SAK_1389 1375232 - 1373721 - | RofA family transcriptional regulator TERM 1784 1375321 - 1375304 - R 76 -3.5 -5.36314 | gap 1, overlap 1375306 TAAAAGACTAAAAAA CT-CACAA TTT TTGTGTAG ATATAACAAAAAAGA TERM 1785 1375351 - 1375335 - R 100 -7.3 -5.62045 | opp_overlap 1375335 AGATATAACAAAAAA GACAGGA AGT TCCTATC TTTTAGAATAAATTA TERM 1786 1375373 - 1375387 + r 76 -8.6 -3.54575 | AATAAATTATTCTTT CTCATC AAT GATGAG TCTTACTTTTTTCCC SAK_1390 1375606 - 1375364 - | hypothetical protein rpsP 1375888 - 1375616 - | 30S ribosomal protein S16 TERM 1787 1375973 - 1376011 + r 86 -3.9 -5.85737 | opp_overlap 1375979, overlap 1375975 1375977 1375978 TAAGTATAACATAAA TACAAACTCTGTCAAGA AAAAA TCTTGACAGAGCATATG TTTTTTTATTCATAT TERM 1788 1375978 - 1376006 + r 81 -10.4 -2.88812 | opp_overlap 1375979, overlap 1375977 1375975 1375973 ATAACATAAATACAA ACTCTGTCAAGA AAAAA TCTTGACAGAGC ATATGTTTTTTTATT TERM 1789 1376005 - 1375979 - R 100 -13.9 -4.45693 | opp_overlap 1375978 1375977 1375975 1375973 TAACATAAATACAAA CTCTGTCAAGA AAAAA TCTTGACAGAG CATATGTTTTTTTAT SAK_1392 1377264 - 1376017 - | ABC transporter, permease protein, putative TERM 1790 1376276 - 1376286 + g 72 -8.2 -3.53091 | overlap 1376283 ATTTTACGTCGAGTT GCCC CAA GGGC TTTACGAAGGCCAAT TERM 1791 1376847 - 1376887 + g 76 -3.4 -5.42259 | overlap 1376855 ACTTTTTGATACCAA GGTAAGTGCGGTTAAT TCCTGTTAT ATTAACCGTCTTTGCC TTTTTTTCAAGGTAA SAK_1393 1377989 - 1377279 - | ABC transporter, ATP-binding protein SAK_1394 1379236 - 1377992 - | RND family efflux transporter MFP subunit TERM 1792 1379275 - 1379320 + r 74 -5.2 -4.81083 | AATATAGAACAAGTG TATTATTTTTAAATAATATT GTCAAG AAAATTCTTTAAAAATAATA TTTTTACTCATTAAG TERM 1793 1379398 - 1379427 + r 100 -15.3 -5.45652 | opp_overlap 1379398 1379403, overlap 1379403 ACTTTTTACCACAAA TAAAAGCTGAGAT CTAT ATCTCAGCTTTTA TTTTTTATTAAGAAT TERM 1794 1379427 - 1379398 - R 100 -15.3 -3.96327 | opp_overlap 1379398 1379403, overlap 1379403 ACTTTTTACCACAAA TAAAAGCTGAGAT CTAT ATCTCAGCTTTTA TTTTTTATTAAGAAT TERM 1795 1379403 - 1379422 + r 100 -10.8 -5.55001 | opp_overlap 1379398 1379403, overlap 1379398 TTACCACAAATAAAA GCTGAGAT CTAT ATCTCAGC TTTTATTTTTTATTA TERM 1796 1379422 - 1379403 - R 100 -10.8 -5.02323 | opp_overlap 1379403 1379398, overlap 1379398 TTACCACAAATAAAA GCTGAGAT CTAT ATCTCAGC TTTTATTTTTTATTA SAK_1395 1381043 - 1379445 - | carbamoyl-phosphate synthase, large subunit, putative carA 1382169 - 1381099 - | carbamoyl phosphate synthase small subunit pyrR 1382739 - 1382218 - | pyrimidine regulatory protein PyrR TERM 1797 1382785 - 1382764 - R 74 -5.9 -4.66537 | gap 1, overlap 1382767 CTCTCTAAGATAAAA GAG-CCCCTT CAA AAGGAGACTC TCTAGAATGACAAAG SAK_1398 1383805 - 1382915 - | ribosomal large subunit pseudouridine synthase A lspA 1384253 - 1383789 - | signal peptidase II SAK_1400 1385167 - 1384262 - | LysR family transcriptional regulator TERM 1798 1385371 - 1385348 - R 95 -9 -4.95547 | opp_overlap 1385348 1385350 CTGACAATAATAAAA GACCTTATGA ATAG TCATAAAGTC TTAACTAGGCATTAT rpmA 1385676 - 1385383 - | 50S ribosomal protein L27 SAK_1402 1386036 - 1385698 - | hypothetical protein rplU 1386357 - 1386043 - | 50S ribosomal protein L21 TERM 1799 1386461 - 1386475 + r 77 -8.6 -3.74747 | CGATTTTCGCGCGGT TGCACA GGA TGTGCA TTTAGTCAACATTCA TERM 1800 1386549 - 1386533 - R 71 -3.1 -5.26907 | CAAGATAAAACAAAA TAAAATT ATC AACTTTA CCACTTCAAATTAAC SAK_1404 1387725 - 1386547 - | CapA domain-containing protein TERM 1801 1387814 - 1387796 - R 100 -7.5 -5.46657 | opp_overlap 1387796 CATTTTAATAAAAAA CTACAGA ATAAA TCTGTAG TTTAAAAATTCATTA TERM 1802 1387796 - 1387814 + r 73 -7.5 -3.62478 | opp_overlap 1387796 CATTTTAATAAAAAA CTACAGA ATAAA TCTGTAG TTTAAAAATTCATTA thiI 1389041 - 1387827 - | thiamine biosynthesis protein ThiI TERM 1803 1388269 - 1388279 + g 70 -3.2 -4.95957 | overlap 1388275 AACGTCATCAAGTAG GCTT CAG GAGC TTTTTCCTTAATTTC SAK_1406 1390188 - 1389043 - | aminotransferase, class V TERM 1804 1390478 - 1390467 - g 76 -4.4 -5.18995 | AAGACAACAGAAAAA GTCT ACTA AGAC TAATACTGATTCAAC SAK_1407 1390435 - 1390887 + | hypothetical protein TERM 1805 1390907 - 1390893 - T 100 -10 -5.46629 | opp_overlap 1390893 AACACCTTAAAAAAA GCTAGG TTC CCTAGC TTTTTTTGTATTCTT TERM 1806 1390893 - 1390907 + T 100 -10 -5.86465 | opp_overlap 1390893 AACACCTTAAAAAAA GCTAGG TTC CCTAGC TTTTTTTGTATTCTT gor 1392280 - 1390931 - | glutathione reductase TERM 1807 1392460 - 1392406 - R 86 -9.6 -4.00782 | opp_overlap 1392407 1392412 1392422, overlap 1392407 1392412 1392415 1392422 GTAGACTATCATAAA TTGAAATATTACAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATACTATTACAT TAAGTCCTGCATGGG TERM 1808 1392459 - 1392407 - R 100 -13.1 -2.99987 | opp_overlap 1392407 1392412 1392422, overlap 1392406 1392412 1392415 1392422 TAGACTATCATAAAT TGAAATATTACAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATACTATTACA TTAAGTCCTGCATGG TERM 1809 1392454 - 1392412 - R 95 -11.6 -3.90286 | opp_overlap 1392412 1392407 1392422, overlap 1392407 1392406 1392415 1392422 TATCATAAATTGAAA TATTACAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATACTA TTACATTAAGTCCTG TERM 1810 1392451 - 1392415 - R 100 -13.3 -2.71089 | opp_overlap 1392412 1392407 1392422, overlap 1392412 1392407 1392406 1392422 CATAAATTGAAATAT TACAAAAGAGAAAACTC AAG GAGCTCTCTCTTTTATA CTATTACATTAAGTC TERM 1811 1392444 - 1392422 - R 90 -9.2 -4.58303 | opp_overlap 1392412 1392407 1392422, overlap 1392415 1392412 1392407 1392406 TGAAATATTACAAAA GAGAAAACTC AAG GAGCTCTCTC TTTTATACTATTACA SAK_1409 1392790 - 1392455 - | hypothetical protein aroC 1394040 - 1392874 - | chorismate synthase aroB 1395108 - 1394041 - | 3-dehydroquinate synthase TERM 1812 1394988 - 1395002 + g 76 -5.8 -4.56367 | overlap 1394979 CTACGTTACTATCTG TGATAA TAG TTATCA TTTGTTTCTGCCATA TERM 1813 1395165 - 1395147 - R 80 -5.3 -5.2015 | gap 1 TTAATAAGACAAAAA CCCTAAGC AATT GCT-AGGG ATCTCATCAGTATAT aroD 1395879 - 1395202 - | 3-dehydroquinate dehydratase SAK_1413 1397036 - 1395879 - | hypothetical protein TERM 1814 1396938 - 1396928 - G 78 -5.4 -5.03314 | opp_overlap 1396928 TTGACTGTGAAAAAA GTTG AAC CAAC TGGTTAACTAAACTG SAK_1414 1397171 - 1399315 + | sulfatase family protein TERM 1815 1399340 - 1399365 + T 100 -10.5 -4.83615 | opp_overlap 1399331 1399341, overlap 1399341 TTTAAAGTTTAATCC ACACCTCAATC CAAC GATTGAGGTGC TTTTTATACGGAATA TERM 1816 1399341 - 1399364 + T 100 -14 -3.49687 | opp_overlap 1399341 1399331, overlap 1399340 TTAAAGTTTAATCCA CACCTCAATC CAAC GATTGAGGTG CTTTTTATACGGAAT TERM 1817 1399364 - 1399341 - T 100 -14 -2.56046 | opp_overlap 1399340 1399341, overlap 1399331 TTAAAGTTTAATCCA CACCTCAATC CAAC GATTGAGGTG CTTTTTATACGGAAT TERM 1818 1399479 - 1399452 - T 100 -8.6 -5.95449 | opp_overlap 1399452 AAATAAAACAAAAAA GTTTCATTCTAC ATAT ATAGAACGAAAC TTTTCACTAAAATTA TERM 1819 1399545 - 1399530 - T 87 -5.4 -5.65513 | opp_overlap 1399522 1399530, overlap 1399521 TAGTAATTAAAAAAA GTTAGG CAAA CCCAAC TTTTTTAATTCTTAT TERM 1820 1399530 - 1399545 + T 74 -3.2 -5.39221 | opp_overlap 1399530 1399521, overlap 1399522 TAGTAATTAAAAAAA GTTAGG CAAA CCCAAC TTTTTTAATTCTTAT rplT 1399916 - 1399557 - | 50S ribosomal protein L20 rpmI 1400174 - 1399974 - | 50S ribosomal protein L35 infC 1400744 - 1400214 - | translation initiation factor IF-3 TERM 1821 1400796 - 1400773 - R 100 -13.2 -4.40526 | TAGAGAAAAACGAAA GCGGACTTGA TAAA TCAAGCCCGC ACATATAATCTTCCT cmk 1401588 - 1400905 - | cytidylate kinase SAK_1419 1402123 - 1401599 - | hypothetical protein SAK_1420 1402169 - 1402366 + | ferredoxin, putative TERM 1822 1402370 - 1402349 - T 77 -8.8 -3.73224 | opp_overlap 1402349 TCATGTCCCACCAAA GCTCTTAC GATTTT GTAAGAGC TTTTTTATCGTAGCG TERM 1823 1402349 - 1402370 + T 100 -9.5 -5.31275 | opp_overlap 1402349 TCATGTCCCACCAAA GCTCTTACG ATTT TGTAAGAGC TTTTTTATCGTAGCG SAK_1421 1402844 - 1402353 - | hypothetical protein TERM 1824 1402779 - 1402757 - G 81 -4.3 -5.25906 | gap 1, overlap 1402747 ATAAACCAATAAAAA TTGGTGCAAT GGCT ATTG-ACCAA TAAATAATAGCCCAA pepT 1404093 - 1402873 - | peptidase T TERM 1825 1404003 - 1403985 - G 77 -10.4 -2.79518 | opp_overlap 1403984 1403989, overlap 1403984 1403989 TTAAAACTGTTAAAG CAAAGTCA ACT TGACTTTG AGTTGTTGGCGTTTG TERM 1826 1404193 - 1404220 + r 100 -10 -4.93547 | opp_overlap 1404193 TTGGTCGTCAAAAAA CTAGGTTAAACA ATTC TGTCTAACCTAG TTTTTCATTAGTTAA TERM 1827 1404220 - 1404193 - R 100 -12.2 -5.00616 | opp_overlap 1404193 TTGGTCGTCAAAAAA CTAGGTTAAACA ATTC TGTCTAACCTAG TTTTTCATTAGTTAA SAK_1423 1405862 - 1404228 - | polysaccharide biosynthesis protein TERM 1828 1404676 - 1404660 - G 78 -9.5 -3.58343 | opp_overlap 1404663, overlap 1404663 1404664 TTTACGATTTTCAAA CAATGCT TGT AGCATTG GTGCTAAAACAGTAT murE 1405986 - 1407440 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1829 1407527 - 1407554 + F 74 -8.6 -3.20322 | opp_overlap 1407534, overlap 1407534 TTTCTTAATTAATGC TAAAAAAGGCTT TTGT AAGCCTTTTTTC TATGTTATAATGAAC TERM 1830 1407534 - 1407547 + F 93 -6.7 -5.48787 | opp_overlap 1407534, overlap 1407527 ATTAATGCTAAAAAA GGCTT TTGT AAGCC TTTTTTCTATGTTAT TERM 1831 1407547 - 1407534 - f 85 -6.7 -5.10029 | opp_overlap 1407527 1407534 ATTAATGCTAAAAAA GGCTT TTGT AAGCC TTTTTTCTATGTTAT fhuC 1407596 - 1408390 + | ferrichrome ABC transporter, ATP-binding protein TERM 1832 1408825 - 1408793 - g 76 -2 -5.42862 | overlap 1408794 ATACTCTGAAAAAAA TTGCACCAACTTTA GTTAT TAAATATGGTGCAC AAAATTATTTAGATA fhuD 1408414 - 1409346 + | ferrichrome ABC transporter, ferrichrome-binding protein TERM 1833 1409397 - 1409419 + G 79 -3.5 -5.52384 | ACTCGTTCAAAAAAA TAAGTCAAA TCATT TTTGGCTTG TTTTTTTCATAACAC fhuB 1409362 - 1410387 + | ferrichrome ABC transporter, permease protein SAK_1428 1410384 - 1411385 + | iron compound ABC transporter, permease protein TERM 1834 1411422 - 1411378 - T 78 -9.7 -3.27406 | gap 1, opp_overlap 1411382 1411390, overlap 1411390 GGTTGATGACAAAAG TTGAC-TAAAAAAGACTGGA CAAACT TCCAGTCTTTTTTATGTTAA GTAAATCTTTAAAGC TERM 1835 1411382 - 1411418 + T 83 -10.5 -3.10701 | gap 1, opp_overlap 1411378 1411390, overlap 1411390 GATGACAAAAGTTGA C-TAAAAAAGACTGGA CAAACT TCCAGTCTTTTTTATG TTAAGTAAATCTTTA TERM 1836 1411390 - 1411409 + T 100 -7.9 -5.48063 | opp_overlap 1411390 1411378, overlap 1411382 AAGTTGACTAAAAAA GACTGGA CAAACT TCCAGTC TTTTTTATGTTAAGT TERM 1837 1411409 - 1411390 - T 91 -7.9 -5.16237 | opp_overlap 1411382 1411390, overlap 1411378 AAGTTGACTAAAAAA GACTGGA CAAACT TCCAGTC TTTTTTATGTTAAGT SAK_1429 1412067 - 1411414 - | hypothetical protein TERM 1838 1412112 - 1412099 - R 87 -5.2 -5.55664 | opp_overlap 1412099 GTATGACTAAAAAAA CGGG ACGCAG CCCG TTTTACATGATTAAT ppaC 1413062 - 1412127 - | putative manganese-dependent inorganic pyrophosphatase TERM 1839 1413172 - 1413156 - R 93 -8.1 -5.26875 | TTTGCAACTAAAAAA GTTGAAT AAA ATTCAAC TTAAAACTAATTTTG pflA 1413967 - 1413179 - | pyruvate formate-lyase-activating enzyme TERM 1840 1414040 - 1414023 - R 100 -8.5 -5.52384 | opp_overlap 1414023 TTTTCATGAAAAAAA GACTAAG TAAT CTTAGTC TTTTTCAATATTCTG TERM 1841 1414023 - 1414040 + r 93 -8.5 -4.76312 | opp_overlap 1414023 TTTTCATGAAAAAAA GACTAAG TAAT CTTAGTC TTTTTCAATATTCTG SAK_1432 1415369 - 1414035 - | CBS domain-containing protein SAK_1433 1416115 - 1415549 - | hypothetical protein TERM 1842 1415926 - 1415936 + g 73 -6.8 -4.21644 | overlap 1415930 CGTTAGAGATCCCTT GCTC CGT GAGC TTTGCTTTCGTTTTT TERM 1843 1415930 - 1415946 + g 74 -4.3 -4.90136 | overlap 1415926 AGAGATCCCTTGCTC CGTGAGC TTT GCTTTCG TTTTTGCTATTGCTT SAK_1434 1417043 - 1416108 - | radical SAM family protein TERM 1844 1417099 - 1417134 + r 77 -7.8 -3.98775 | opp_overlap 1417104, overlap 1417104 ACTACAATAAAACTA AAAAAGATTGGAAC GTCAGTTA GTTCCAATCTTTTA TTTACTTCACTTTCT TERM 1845 1417104 - 1417129 + r 89 -7.7 -4.99947 | opp_overlap 1417104, overlap 1417099 AATAAAACTAAAAAA GATTGGAAC GTCAGTTA GTTCCAATC TTTTATTTACTTCAC TERM 1846 1417129 - 1417104 - R 100 -7.7 -5.52347 | opp_overlap 1417104 1417099 AATAAAACTAAAAAA GATTGGAAC GTCAGTTA GTTCCAATC TTTTATTTACTTCAC SAK_1435 1417777 - 1417136 - | PAP2 family protein TERM 1847 1417290 - 1417279 - G 80 -2.2 -5.64006 | overlap 1417288 ACCCAATTAAAAAAA TGAG CAAA CCCA AAATACCTTGGCACA SAK_1436 1418342 - 1417758 - | hypothetical protein TERM 1848 1418323 - 1418309 - G 70 -6.4 -4.11906 | opp_overlap 1418309 ATAAGGCAGAAAGAA TGGCGA TTG TCACCA TTTTACGTGTATTTG TERM 1849 1418377 - 1418350 - R 100 -7.2 -5.60993 | TTTGTCATAAAAAAA TTCCTCCAATTT AAAT AAATTGAAAGAA GCTCCAAAGGTAAGC TERM 1850 1418589 - 1418576 - R 100 -6.7 -6.17268 | opp_overlap 1418576 GCATAACAAAAAAAA CTTGC AATT GCAAG TTTTTTAATCACTAA TERM 1851 1418576 - 1418589 + r 88 -6.7 -5.1675 | opp_overlap 1418576 GCATAACAAAAAAAA CTTGC AATT GCAAG TTTTTTAATCACTAA SAK_1437 1419225 - 1418626 - | sortase family protein, putative SAK_1438 1419889 - 1419218 - | hypothetical protein SAK_1439 1420754 - 1419879 - | sortase family protein SAK_1440 1422300 - 1420792 - | surface protein Spb1 SAK_1441 1425622 - 1422341 - | Cna B domain-containing protein SAK_1442 1426641 - 1425799 - | hypothetical protein TERM 1852 1426577 - 1426590 + g 95 -4.5 -6.04324 | CACATGATAATTTTC CACTC TTTA GGGTG TTTTTTCTTTTTTAA lepB 1427229 - 1426660 - | signal peptidase I TERM 1853 1427126 - 1427106 - G 91 -9.7 -4.43911 | AAACCGCAATTAAAA TGGCTGTTG AGG CAACCGCCA TCAAGATGTATATGG SAK_1444 1427485 - 1427213 - | hypothetical protein SAK_1445 1428872 - 1427724 - | glycosyl transferase, group 1 family protein SAK_1446 1429710 - 1428862 - | glycosyl transferase, group 2 family protein TERM 1854 1429600 - 1429625 + g 78 -9.9 -3.34895 | gap 1 CTCCTTATTTTTCGA GCCATTATCTAC GAT GTAGATA-TGGC TTACTTGAGGATAAA SAK_1447 1431131 - 1429707 - | polysaccharide biosynthesis protein SAK_1448 1432495 - 1431131 - | hypothetical protein TERM 1855 1432133 - 1432121 - G 70 -5.5 -4.40561 | TTTGCCTAAAAATAA GCCAA CTG CTGGC ACAAGATGACCCCAA SAK_1449 1433444 - 1432497 - | glycosyl transferase, group 2 family protein TERM 1856 1432596 - 1432620 + g 74 -5.2 -4.87786 | gap 1 CATTTGTTTAAGTAT TGCTACAAAAT CTTT ATTTTG-AGCA TTTTTATAACGTTGC TERM 1857 1433201 - 1433189 - G 81 -9.1 -4.10781 | AATAATCTACAGAAA GACGC TTA GCGTC TAAAAGCAACTGACG SAK_1450 1434388 - 1433453 - | glycosyl transferase, group 2 family protein TERM 1858 1434043 - 1434031 - G 76 -7.7 -4.18018 | opp_overlap 1434030 1434031 CGTCTGCACTCAAAA CCTCA ATT TGAGG ATTATCTGACATAAT SAK_1451 1435445 - 1434390 - | nucleotide sugar dehydratase, putative ispD 1436167 - 1435448 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase licD2 1436994 - 1436170 - | licD2 protein TERM 1859 1436665 - 1436652 - G 73 -3.1 -5.17744 | AGATATCAATAAAAA TCCCT GTCC AAGGA TGAATTCTATCTGTT SAK_1454 1438752 - 1437019 - | hypothetical protein TERM 1860 1437535 - 1437546 + g 74 -3 -5.37043 | AGAGCCATTAGGTTG GTAT AGAA ATAC TTTTTTATCTGCACT SAK_1455 1439098 - 1438745 - | hypothetical protein SAK_1456 1439823 - 1439095 - | glycosyl transferase, group 2 family protein SAK_1457 1440769 - 1439828 - | glycosyl transferase, group 2 family protein rgpAc 1441913 - 1440759 - | rgpAc protein TERM 1861 1442017 - 1441980 - R 74 -5.8 -4.69027 | gap 1 AAAGTTAGCTAAAAA GAGCAGTAAG-CTAAAA GGATT CTCTAGCCTTACTACTC TTTGTTTTGATCTTA rfbD 1442884 - 1442030 - | dTDP-4-dehydrorhamnose reductase SAK_1460 1443315 - 1442974 - | hypothetical protein TERM 1862 1443209 - 1443195 - G 71 -7.2 -3.9279 | AGCGAATCTCATAAA TTAACC CAA GGTTAA CAATATCTATTCCCA rpoD 1444533 - 1443424 - | RNA polymerase sigma factor RpoD TERM 1863 1444328 - 1444341 + g 70 -6.7 -4.17417 | ACCACATACTTTGTT GAAGG ATTG CCTTC TTTGTCTGTAATTGA dnaG 1446322 - 1444541 - | DNA primase TERM 1864 1446364 - 1446374 + H 86 -4 -5.8901 | TTATAGTTTTACATT TGAT TAT ATCA TTTTTTCTTTTCTGT mscL 1446539 - 1446916 + | large conductance mechanosensitive channel protein TERM 1865 1446948 - 1446914 - T 74 -6.7 -4.16016 | gap 1, opp_overlap 1446924 1446947, overlap 1446917 1446922 1446924 TTACTCGCTAACAAA TAATAAAAGA-CTCGG ATTA CCGAGTTTTTTTATTA ACTCATAGTTATAAT TERM 1866 1446939 - 1446922 - T 76 -5.5 -5.08731 | opp_overlap 1446924, overlap 1446917 1446914 1446924 TAACAAATAATAAAA GACTCGG ATTA CCGAGTT TTTTTATTAACTCAT TERM 1867 1446924 - 1446937 + T 100 -8.1 -5.8187 | opp_overlap 1446924 1446922 1446917 1446914 ACAAATAATAAAAGA CTCGG ATTA CCGAG TTTTTTTATTAACTC TERM 1868 1446937 - 1446924 - T 79 -8.1 -4.12859 | opp_overlap 1446924, overlap 1446922 1446917 1446914 ACAAATAATAAAAGA CTCGG ATTA CCGAG TTTTTTTATTAACTC TERM 1869 1447004 - 1446963 - T 100 -14.1 -3.40071 | opp_overlap 1446965 1446975, overlap 1446965 1446975 AACTCATAGTTATAA TATATGAAAAAACAGCTCA ATTC TGAACTGTTTTTTCATATT CTATCTAATTAGAAT TERM 1870 1446965 - 1447002 + T 100 -14.5 -3.646 | opp_overlap 1446965 1446963 1446975, overlap 1446975 CTCATAGTTATAATA TATGAAAAAACAGCTCA ATTC TGAACTGTTTTTTCATA TTCTATCTAATTAGA TERM 1871 1447002 - 1446965 - T 100 -16.7 -3.26722 | opp_overlap 1446965 1446975, overlap 1446963 1446975 CTCATAGTTATAATA TATGAAAAAACAGCTCA ATTC TGAACTGTTTTTTCATA TTCTATCTAATTAGA TERM 1872 1446992 - 1446975 - T 84 -6.3 -5.27399 | opp_overlap 1446965 1446975, overlap 1446965 1446963 TAATATATGAAAAAA CAGCTCA ATTC TGAACTG TTTTTTCATATTCTA TERM 1873 1446975 - 1446992 + T 74 -4.1 -5.30189 | opp_overlap 1446975 1446965 1446963, overlap 1446965 TAATATATGAAAAAA CAGCTCA ATTC TGAACTG TTTTTTCATATTCTA rpsU 1447189 - 1447013 - | 30S ribosomal protein S21 SAK_1465 1447796 - 1447293 - | hypothetical protein TERM 1874 1447869 - 1447856 - R 88 -6.7 -5.17054 | opp_overlap 1447856 1447850 ATAACATCCAAAAAA GCCTA TGAC TAGGC TTTTTAATATTATTC TERM 1875 1447856 - 1447869 + r 83 -6.7 -4.93316 | opp_overlap 1447856, overlap 1447850 ATAACATCCAAAAAA GCCTA TGAC TAGGC TTTTTAATATTATTC SAK_1466 1448685 - 1447879 - | polar amino acid ABC transporter amino acid-binding protein TERM 1876 1448149 - 1448182 + g 84 -7.5 -4.60924 | gap 1 TAACTCACTAATCGC TTCTCCCATCGCTGTC AGT GACA-CGACGTGAGAA TTTTTGAACGATTTC TERM 1877 1449012 - 1448971 - R 100 -20.7 -4.07568 | opp_overlap 1448971 1448978, overlap 1448974 1448978 CTCTCCTTGCTAAAA TAATAAATAAGGTTGAGAT GTAC ATCTCAACCTTATTTATTA TTTTCTAAAAATCGC TERM 1878 1448971 - 1449012 + r 100 -20.7 -4.38712 | opp_overlap 1448971 1448974 1448978, overlap 1448978 CTCTCCTTGCTAAAA TAATAAATAAGGTTGAGAT GTAC ATCTCAACCTTATTTATTA TTTTCTAAAAATCGC TERM 1879 1449009 - 1448974 - R 100 -18 -4.17048 | opp_overlap 1448971 1448978, overlap 1448971 1448978 TCCTTGCTAAAATAA TAAATAAGGTTGAGAT GTAC ATCTCAACCTTATTTA TTATTTTCTAAAAAT TERM 1880 1449005 - 1448978 - R 100 -14.4 -4.67697 | opp_overlap 1448971 1448978, overlap 1448974 1448971 TGCTAAAATAATAAA TAAGGTTGAGAT GTAC ATCTCAACCTTA TTTATTATTTTCTAA TERM 1881 1448978 - 1449005 + r 100 -14.4 -4.72617 | opp_overlap 1448978 1448974 1448971, overlap 1448971 TGCTAAAATAATAAA TAAGGTTGAGAT GTAC ATCTCAACCTTA TTTATTATTTTCTAA SAK_1467 1450029 - 1449010 - | ammonium transporter (Amt) family protein SAK_1468 1450133 - 1451260 + | hypothetical protein TERM 1882 1451265 - 1451286 + T 100 -10.2 -5.27779 | opp_overlap 1451265 GTGATTGCTAAAAAA TCGCTAGC TTTATT GCTAGCGA TTTTTTAATATTAAA TERM 1883 1451286 - 1451265 - T 100 -10.2 -5.03314 | opp_overlap 1451265 GTGATTGCTAAAAAA TCGCTAGC TTTATT GCTAGCGA TTTTTTAATATTAAA SAK_1469 1452283 - 1451297 - | hypothetical protein SAK_1470 1452446 - 1452751 + | hypothetical protein TERM 1884 1452838 - 1452855 + T 91 -7.7 -5.1675 | opp_overlap 1452838 ATCTAAAACAAAAAA GGTCTCT TTCA AGAGGCC TTTTTTCATAACTAC TERM 1885 1452855 - 1452838 - T 91 -5.5 -5.80951 | opp_overlap 1452838 ATCTAAAACAAAAAA GGTCTCT TTCA AGAGGCC TTTTTTCATAACTAC SAK_1471 1454279 - 1452906 - | glycerol-3-phosphate transporter, putative TERM 1886 1454680 - 1454662 - R 100 -10.4 -5.60689 | opp_overlap 1454662 TTAGACAACAAAAAA GTAAGGTT GAA AACCTTAC TTTTAGAGACTTTTT TERM 1887 1454662 - 1454680 + r 91 -10.4 -4.14615 | opp_overlap 1454662 TTAGACAACAAAAAA GTAAGGTT GAA AACCTTAC TTTTAGAGACTTTTT glgP 1456958 - 1454694 - | glycogen/starch/alpha-glucan phosphorylase malQ 1458466 - 1456970 - | 4-alpha-glucanotransferase TERM 1888 1458100 - 1458113 + g 75 -5.3 -4.7329 | overlap 1458110 TTCTCGTAGCTCTCT CTTCT TTCA AGAAG TTTTTAACTGCTTTT TERM 1889 1458547 - 1458573 + r 74 -7.4 -4.09822 | opp_overlap 1458549 1458563, overlap 1458549 1458563 AGCATAATTTAAAAA AACTTCTATCGA AAA TTGATAGAAGTC TTTATATCATAGCTT TERM 1890 1458571 - 1458549 - R 100 -7.8 -5.55698 | opp_overlap 1458549 1458547 1458563, overlap 1458563 CATAATTTAAAAAAA CTTCTATCGA AAA TTGATAGAAG TCTTTATATCATAGC TERM 1891 1458549 - 1458571 + r 86 -10 -3.6393 | opp_overlap 1458549 1458563, overlap 1458547 1458563 CATAATTTAAAAAAA CTTCTATCGA AAA TTGATAGAAG TCTTTATATCATAGC SAK_1474 1459615 - 1458587 - | maltose operon transcriptional repressor MalR, putative SAK_1475 1459871 - 1461118 + | carbohydrate ABC transporter periplasmic-binding protein SAK_1476 1461216 - 1462586 + | cyclodextrin ABC transporter, permease protein SAK_1477 1462586 - 1463422 + | cyclodextrin ABC transporter, permease protein TERM 1892 1463482 - 1463507 + F 100 -12.7 -4.85599 | opp_overlap 1463482 1463505 TTCTTTTCTAAAAAA GGCTTGAGTTC TATT GAATTCAAGCC TTTTTCTAGGCTAGA TERM 1893 1463507 - 1463482 - f 100 -10.5 -5.00616 | opp_overlap 1463482, overlap 1463505 TTCTTTTCTAAAAAA GGCTTGAGTTC TATT GAATTCAAGCC TTTTTCTAGGCTAGA TERM 1894 1463547 - 1463534 - f 88 -6.7 -5.14477 | TAGATAGTTAAAAAA CTTGG TTTA CCAAG GGTGTTAACCTCTAC TERM 1895 1463687 - 1463699 + G 76 -7.7 -4.08958 | overlap 1463676 TCTTTGGACATCCTC GTGGA TTG TCCAC TCTTTTCTTTACTGA SAK_1478 1463653 - 1465125 + | amino acid/peptide transporter TERM 1896 1465139 - 1465161 + T 100 -7.8 -5.68438 | opp_overlap 1465139 AAAGACATCTAAAAA GAACTAGG AATGTAA CCTAGTTC TTTTTTGTTTAATAA TERM 1897 1465161 - 1465139 - T 87 -7.8 -4.75356 | opp_overlap 1465139 AAAGACATCTAAAAA GAACTAGG AATGTAA CCTAGTTC TTTTTTGTTTAATAA SAK_1479 1465634 - 1465170 - | NUDIX family hydrolase TERM 1898 1465230 - 1465218 - G 73 -6.3 -4.46212 | opp_overlap 1465218 TCGCTTACTATAAAA CATCT CTG AGATG TCATCTTCATCAAAT TERM 1899 1465755 - 1465742 - R 71 -3.1 -5.13741 | GTAAGTTAAGAAAAA TCGAA TAAT TCCGA TAATAGACATGATTA SAK_1480 1467242 - 1465917 - | hypothetical protein SAK_1481 1468743 - 1467235 - | glycosyl transferase, group 1 family protein secA 1471144 - 1468757 - | preprotein translocase subunit SecA TERM 1900 1469062 - 1469078 + g 74 -3.8 -5.09521 | GAAGAATCTCATCGG CTATTT TGAAT AAATAG TTTTTAATTTCTTCA TERM 1901 1469412 - 1469425 + g 78 -5.3 -4.91712 | TGGAATCTTCTCTGA CCTAA GGCT TTAGG TTTTTCTGGATTAAC asp3 1472123 - 1471131 - | hypothetical protein TERM 1902 1472076 - 1472052 - G 76 -5.9 -4.57569 | opp_overlap 1472058 TGATTTTCCCAAAAA TTGTAATTTTG TTC CAAAATTATAA GAAAACCTTGAAAAA asp2 1473604 - 1472120 - | hypothetical protein asp1 1475230 - 1473686 - | hypothetical protein TERM 1903 1475155 - 1475142 - G 81 -8.1 -4.32436 | ATAGTATCATCAAAA CCGAC ATTA GTCGG CTTGAAATACCACAA secY 1476459 - 1475230 - | preprotein translocase subunit SecY SAK_1487 1477779 - 1476583 - | hypothetical protein SAK_1488 1478715 - 1477840 - | glycosyl transferase, group 2 family protein SAK_1489 1479892 - 1478708 - | glycosyl transferase family protein SAK_1490 1481123 - 1479882 - | glycosyl transferase family protein TERM 1904 1481034 - 1481023 - G 70 -3 -5.10064 | opp_overlap 1481023 TTTAAGATATAAAAA TCAA TAAA TTGA TTATGAAAGCATATT SAK_1491 1482325 - 1481120 - | glycosyl transferase family protein SAK_1492 1483341 - 1482334 - | hypothetical protein TERM 1905 1483630 - 1483597 - R 100 -10.6 -5.18726 | gap 1, opp_overlap 1483597 CTTCTACAACAAAAA GGCATATCTCTCTAA AAATA TTA-AGAGATATGCC TTTTACCATGTCATT TERM 1906 1483597 - 1483630 + r 95 -10.6 -4.18058 | gap 1, opp_overlap 1483597 CTTCTACAACAAAAA GGCATATCTCTCTAA AAATA TTA-AGAGATATGCC TTTTACCATGTCATT SAK_1493 1487448 - 1483672 - | cell wall surface anchor family protein TERM 1907 1487867 - 1487857 - R 75 -2.6 -5.60993 | opp_overlap 1487837, overlap 1487837 TTTTTTAGAAAAAAA TATT CTT AATA AAGTTAAATTACTTA TERM 1908 1488768 - 1488782 + r 76 -7.2 -4.26881 | CCTACTACGATGAGC TAGTGA AAG TCACTA TTTACTTTTCTCGAA TERM 1909 1489357 - 1489406 + r 100 -16.9 -3.73144 | opp_overlap 1489357 1489361 1489366, overlap 1489366 TTTTGATTTCAATTA TTAATAAAACGACTAGAGCACTT CATT AACTACTCTAGTCGTTTTATTAA TTCTGTTCATCGTAT TERM 1910 1489406 - 1489357 - R 100 -19.1 -2.73364 | opp_overlap 1489357 1489366, overlap 1489361 1489366 TTTTGATTTCAATTA TTAATAAAACGACTAGAGCACTT CATT AACTACTCTAGTCGTTTTATTAA TTCTGTTCATCGTAT TERM 1911 1489402 - 1489361 - R 100 -15.5 -3.27774 | opp_overlap 1489357 1489366, overlap 1489357 1489366 GATTTCAATTATTAA TAAAACGACTAGAGCACTT CATT AACTACTCTAGTCGTTTTA TTAATTCTGTTCATC TERM 1912 1489397 - 1489366 - R 100 -11 -4.75219 | opp_overlap 1489366 1489357, overlap 1489361 1489357 CAATTATTAATAAAA CGACTAGAGCACTT CATT AACTACTCTAGTCG TTTTATTAATTCTGT TERM 1913 1489366 - 1489397 + r 93 -8.8 -4.82756 | opp_overlap 1489361 1489357 1489366, overlap 1489357 CAATTATTAATAAAA CGACTAGAGCACTT CATT AACTACTCTAGTCG TTTTATTAATTCTGT uvrB 1491412 - 1489421 - | excinuclease ABC subunit B TERM 1914 1490415 - 1490403 - G 89 -6.3 -5.33848 | overlap 1490405 ATCATAATCAAAAAA TCTTC TGG GAAGA AATCTAACAAAGTAA TERM 1915 1490443 - 1490433 - G 78 -6.8 -4.67942 | opp_overlap 1490433 1490427 TCTAACAAAGTAAAA GGTG GCT CACC TTCACTTCTACCATC TERM 1916 1491484 - 1491451 - R 93 -6.9 -5.47431 | gap 1, opp_overlap 1491451 1491457, overlap 1491457 TTAACATAGAAAAAA GAAAAAGACTGAGCTG CAA CA-CTCAATCTGTTTC TTCAGTCTTAATTAG TERM 1917 1491478 - 1491457 - R 87 -4.5 -5.8096 | gap 1, opp_overlap 1491451 1491457, overlap 1491451 TAGAAAAAAGAAAAA GACTGAGCTG CAA CA-CTCAATC TGTTTCTTCAGTCTT SAK_1496 1492393 - 1491473 - | CAAX amino terminal protease family protein TERM 1918 1493496 - 1493483 - g 75 -5.3 -4.81082 | AATTAATCAAGAAAA TTGCT AAAC AGCAA GGTTTTAAACTTGAT SAK_1497 1492576 - 1494759 + | polar amino acid ABC transporter permease/substrate-binding protein TERM 1919 1495186 - 1495170 - g 81 -9.5 -3.68265 | AAAGCTAATGCCAAA CCAGATA GTT TATCTGG AGGACAAAAACAACG SAK_1498 1494759 - 1495499 + | polar amino acid ABC transporter ATP-binding protein TERM 1920 1495523 - 1495507 - T 93 -6.6 -5.45652 | opp_overlap 1495500 1495507 ACGTTTAATAAAAAA GATGAC TTCGT GTCATC TTTTTTTATTTCCTA TERM 1921 1495507 - 1495523 + T 100 -6.6 -5.99154 | opp_overlap 1495507, overlap 1495500 ACGTTTAATAAAAAA GATGAC TTCGT GTCATC TTTTTTTATTTCCTA TERM 1922 1496096 - 1496077 - T 100 -9.4 -5.07971 | opp_overlap 1496077 TAAAATAACTAAAAA GGATAGTT ACTT AACTATCC TTTTTTCTTTTGCTA TERM 1923 1496077 - 1496096 + T 100 -9.4 -5.83211 | opp_overlap 1496077 TAAAATAACTAAAAA GGATAGTT ACTT AACTATCC TTTTTTCTTTTGCTA SAK_1499 1496250 - 1496083 - | hypothetical protein obgE 1497583 - 1496276 - | GTPase ObgE TERM 1924 1497642 - 1497631 - R 90 -5.8 -5.67063 | opp_overlap 1497631 TTCAGTATAAAAAAA CGCT TTAC AGCG TTTCTCATTACATGA SAK_1501 1497778 - 1497650 - | hypothetical protein TERM 1925 1499090 - 1499103 + G 73 -5.3 -4.58213 | GGTTTAAATCGTTCT TCAAC ACAT GTTGA TTTTATGATTGGTTC pepS 1497956 - 1499197 + | aminopeptidase PepS TERM 1926 1499190 - 1499240 + T 79 -7.4 -4.36716 | gap 2, opp_overlap 1499199 1499207, overlap 1499199 1499207 GAAATGGCGAATGGG CTAT-TTAAATATAAAAA-GGAGG TTAGT CCTCCTTTTTTATATTTAATAAAG TTTCATTTTCTTATT TERM 1927 1499230 - 1499199 - T 75 -8.3 -3.65199 | gap 1, opp_overlap 1499190 1499199 1499207, overlap 1499207 AATGGGCTATTTAAA TATAAAAA-GGAGG TTAGT CCTCCTTTTTTATA TTTAATAAAGTTTCA TERM 1928 1499199 - 1499230 + T 77 -8.3 -3.7795 | gap 1, opp_overlap 1499199 1499207, overlap 1499190 1499207 AATGGGCTATTTAAA TATAAAAA-GGAGG TTAGT CCTCCTTTTTTATA TTTAATAAAGTTTCA TERM 1929 1499221 - 1499207 - T 91 -7.1 -5.20783 | opp_overlap 1499199 1499190 1499207, overlap 1499199 ATTTAAATATAAAAA GGAGG TTAGT CCTCC TTTTTTATATTTAAT TERM 1930 1499207 - 1499221 + T 100 -7.1 -5.5762 | opp_overlap 1499207 1499199, overlap 1499199 1499190 ATTTAAATATAAAAA GGAGG TTAGT CCTCC TTTTTTATATTTAAT SAK_1503 1499810 - 1499232 - | cell wall surface anchor family protein SAK_1504 1501962 - 1499920 - | amidase family protein SAK_1505 1502769 - 1502047 - | RNA pseudouridine synthase family protein TERM 1931 1502927 - 1502956 + r 82 -9.5 -3.65046 | opp_overlap 1502932, overlap 1502932 GAACTATCCCACATA AAAAAGATGGAAA TACA TTTCCATCTTTTC TTATTAAAATGAGAC TERM 1932 1502951 - 1502932 - R 100 -9.4 -5.37043 | opp_overlap 1502927 1502932 ATCCCACATAAAAAA GATGGAAA TACA TTTCCATC TTTTCTTATTAAAAT TERM 1933 1502932 - 1502951 + r 100 -9.4 -4.90079 | opp_overlap 1502932, overlap 1502927 ATCCCACATAAAAAA GATGGAAA TACA TTTCCATC TTTTCTTATTAAAAT SAK_1506 1503802 - 1502960 - | aldo/keto reductase family oxidoreductase SAK_1507 1504069 - 1504743 + | nitroreductase family protein gloA 1504831 - 1505223 + | lactoylglutathione lyase TERM 1934 1505248 - 1505270 + F 70 -4.2 -4.98857 | gap 1, opp_overlap 1505248 ATCATATTAAGTTAA GGACTGAGG CAAAAA CCT-AGTCC TTTTTATGATTACCT SAK_1509 1505352 - 1506278 + | glycosyl transferase, group 2 family protein TERM 1935 1506286 - 1506310 + F 91 -9.4 -4.46212 | opp_overlap 1506281 1506286 AGGGATGAATTGAAA TCTCTTAGCT CACTT AGCTAGGAGA TTTTATCATAGAAAA TERM 1936 1506310 - 1506286 - f 72 -7.2 -3.78597 | opp_overlap 1506286, overlap 1506281 AGGGATGAATTGAAA TCTCTTAGCT CACTT AGCTAGGAGA TTTTATCATAGAAAA TERM 1937 1506373 - 1506363 - f 72 -2.6 -5.41746 | AATTTTGCAAAAAAA TTAT ATA ATAA AGGAGTTTTTCAAAA cycA 1506407 - 1507795 + | D-Serine/D-alanine/glycine:H+ symporter TERM 1938 1507809 - 1507832 + T 100 -10.4 -5.14563 | opp_overlap 1507806 1507814 AAGTCTATATTATTA GTGAAGTTGG TCAA TCAACTTCAC TTTTTTCGTCCAAAA TERM 1939 1507869 - 1507850 - T 100 -12.2 -5.00616 | opp_overlap 1507850 TTTTCGTCCAAAAAA GGTTAGGC AATT GCCTAACC TTTTGATAATCATCG TERM 1940 1507850 - 1507869 + T 100 -12.2 -4.32034 | opp_overlap 1507850 TTTTCGTCCAAAAAA GGTTAGGC AATT GCCTAACC TTTTGATAATCATCG smpB 1508346 - 1507879 - | SsrA-binding protein rnr 1510754 - 1508349 - | ribonuclease R TERM 1941 1508392 - 1508405 + g 88 -5.3 -5.62552 | overlap 1508400 CCTTTCTTAGCAACG CCTTT ATAG AAAGG TTTTTTCGTTTTTTT TERM 1942 1510819 - 1510846 + r 93 -11.3 -3.73008 | opp_overlap 1510819, overlap 1510811 TTCTACTAACAAAAA GTGAGGTTGGG CTATCC CCCATCCTCAC TTATCTGTATTTAGC TERM 1943 1510846 - 1510819 - R 100 -11.3 -5.1356 | opp_overlap 1510819 1510811 TTCTACTAACAAAAA GTGAGGTTGGG CTATCC CCCATCCTCAC TTATCTGTATTTAGC secG 1511103 - 1510867 - | preprotein translocase subunit SecG SAK_1515 1512462 - 1511293 - | drug:H+ antiporter-1 (DHA1) family protein TERM 1944 1512459 - 1512427 - G 91 -9.2 -4.37734 | CATAACAAGTGAAAA GCTTGCCCCAGTAA AAAAA TTACCGAGCCAAGC CACTTTTAAATTTTG SAK_1516 1514304 - 1512658 - | hypothetical protein SAK_1517 1514995 - 1514294 - | ABC transporter, ATP binding protein TERM 1945 1515108 - 1515090 - R 93 -6.1 -5.61913 | opp_overlap 1515090 AATAAAGACAAAAAA TGGATAA ATACA TTATCCA TTTAGTAGTTCTATA coaE 1515706 - 1515119 - | dephospho-CoA kinase mutM 1516524 - 1515703 - | formamidopyrimidine-DNA glycosylase TERM 1946 1516354 - 1516344 - G 81 -5.4 -5.1166 | CACCAAAATCAAAAA GAAG ATA CTTC CCTCGTCTCAATACC SAK_1520 1517521 - 1516673 - | Rgg/GadR/MutR family transcriptional regulator TERM 1947 1517195 - 1517185 - G 74 -4 -5.17576 | GATCAATTGAAAAAA TAAG AGC CTTA ATCATAATCTTTTCA TERM 1948 1517410 - 1517424 + g 71 -7.2 -3.98083 | TTTCTGACTCTCCTC TCTCAA ACC TTGAGA TTTGTGACTTGGATA TERM 1949 1518696 - 1518676 - g 88 -5.3 -5.63374 | overlap 1518667 CGAATACCAAAAAAA TCTCGGAAG CAT CATCCGGGA AATTGGAGATACACT SAK_1521 1517738 - 1519330 + | hypothetical protein TERM 1950 1519504 - 1519487 - T 71 -8.5 -2.83522 | overlap 1519486 ATTGTGTTATCAAAC CTGTCAT TACT ATGACAG TTGAACATGTGGAAA TERM 1951 1519562 - 1519589 + T 100 -12.8 -5.27335 | opp_overlap 1519562 CTCCTAAAATAAAAA GGAACACTGCCA TTTT TGACAGTGTTCC TTTTTATTTAACCAA TERM 1952 1519589 - 1519562 - T 100 -15 -5.45802 | opp_overlap 1519562 CTCCTAAAATAAAAA GGAACACTGCCA TTTT TGACAGTGTTCC TTTTTATTTAACCAA SAK_1522 1520084 - 1519986 - | hypothetical protein TERM 1953 1520190 - 1520156 - R 84 -5.2 -5.4833 | opp_overlap 1520156 1520157 1520179, overlap 1520157 1520179 TTATCTAACAAAAAA CTCGTAATTCTATATA AAT CATATAAAGTTACGAA CTTTATTTAGTTAAC TERM 1954 1520269 - 1520246 - R 71 -6.8 -4.11105 | opp_overlap 1520251, overlap 1520251 TAAAAAAACGAATAA CAAAAGAGCC AAAA AGCTCTTTTA AACTGACAAAAATGT TERM 1955 1520264 - 1520251 - R 73 -4.5 -4.96523 | opp_overlap 1520251, overlap 1520246 AAACGAATAACAAAA GAGCC AAAA AGCTC TTTTAAACTGACAAA SAK_1523 1520573 - 1520319 - | CAAX amino terminal protease family protein TERM 1956 1520745 - 1520735 - R 71 -3.2 -5.13722 | CCCAGCAAAATAAAA CGCT AAA AGCA CCTATTGCAAATAGC SAK_1524 1521704 - 1521303 - | hypothetical protein era 1522840 - 1521941 - | GTP-binding protein Era dgkA 1523280 - 1522882 - | diacylglycerol kinase SAK_1527 1523746 - 1523261 - | putative metalloprotease TERM 1957 1523679 - 1523705 + g 80 -6.7 -4.88711 | CCTGTTTTTTGTGCT GCAAACTCT AACAAATCA AGAGTTTGC TTTTTGATATCTTCT SAK_1528 1524959 - 1524153 - | tetracenomycin polyketide synthesis O-methyltransferase TcmP, putative SAK_1529 1525757 - 1525281 - | NUDIX family hydrolase SAK_1530 1525949 - 1526752 + | hypothetical protein TERM 1958 1526776 - 1526793 + T 100 -9.9 -5.1615 | opp_overlap 1526776 ACACCATCATAAAAA CGCCTAA AGCA TTAGGCG TTTTTTACATATTGA TERM 1959 1526793 - 1526776 - T 100 -9.9 -4.93898 | opp_overlap 1526776 ACACCATCATAAAAA CGCCTAA AGCA TTAGGCG TTTTTTACATATTGA SAK_1531 1527829 - 1526843 - | KH domain-containing protein TERM 1960 1527913 - 1527945 + r 90 -9.4 -4.3208 | opp_overlap 1527918, overlap 1527918 GTCGTTGTAAAACTA AAAAATCGAGAAAA ACAAG TTTTCTCGATTTTA TTTTACATTATAAAA TERM 1961 1527940 - 1527918 - R 100 -9.3 -5.46698 | opp_overlap 1527913 1527918 TGTAAAACTAAAAAA TCGAGAAAA ACAAG TTTTCTCGA TTTTATTTTACATTA TERM 1962 1527918 - 1527940 + r 95 -9.3 -5.13343 | opp_overlap 1527918, overlap 1527913 TGTAAAACTAAAAAA TCGAGAAAA ACAAG TTTTCTCGA TTTTATTTTACATTA SAK_1532 1529725 - 1527953 - | 67 kDa myosin-cross-reactive streptococcal antigen TERM 1963 1529871 - 1529852 - R 84 -6.5 -5.1925 | opp_overlap 1529852 1529845 CTATAACCTAAAAAA GAGATTG AAAATA CAATCTC TATATTATTGTTAAT SAK_1533 1530070 - 1529882 - | hypothetical protein msrA 1530603 - 1530094 - | methionine sulfoxide reductase A SAK_1535 1531595 - 1530741 - | hypothetical protein TERM 1964 1531659 - 1531613 - R 93 -9.7 -4.56597 | gap 1, opp_overlap 1531627 1531642 TTCTCCTTTTAAAAA GGTAACCGACA-AACCAAATCC ATCT GGTTTTGATTCTATCAGTTACC TCCATAATCATTTTA frr 1532270 - 1531713 - | ribosome recycling factor TERM 1965 1532228 - 1532246 + g 73 -6 -4.41241 | AACTTTGGTGTGATT GCTCAAAA CGC TCTTGAGC TTTTGTAACGATTTC pyrH 1533014 - 1532286 - | uridylate kinase TERM 1966 1532564 - 1532584 + g 84 -11.1 -3.551 | CTTCTGCCTCAATCT CAGCAGCAC GAA GCGCTGCTG TTGTATCAGTTGAGA nikE 1533815 - 1533135 - | nickel ABC transporter, ATP-binding protein nikD 1534590 - 1533802 - | nickel ABC transporter, ATP-binding protein TERM 1967 1533843 - 1533855 + g 74 -7.7 -3.89971 | CTTCATACTCCATTT GCACT GTC AGTGC TTTCGTATAGTTATG nikC 1535339 - 1534578 - | nickel ABC transporter, permease protein TERM 1968 1535270 - 1535254 - G 70 -8.1 -3.41962 | opp_overlap 1535254, overlap 1535252 CCTAACAAATGAACA TTATTGG GAG CCAATAA TTTTTGTGATAAATC TERM 1969 1535254 - 1535270 + g 95 -8.1 -4.9218 | opp_overlap 1535254 1535252 CCTAACAAATGAACA TTATTGG GAG CCAATAA TTTTTGTGATAAATC nikB 1536328 - 1535384 - | nickel ABC transporter, permease protein nikA 1537931 - 1536315 - | nickel ABC transporter, nickel-binding protein TERM 1970 1537683 - 1537703 + g 78 -9.8 -3.37939 | opp_overlap 1537679, overlap 1537678 ATCTTGACTAATGCT CCAGCTTT TCGCT AAAGCTGG TTCAATTTTCCCATT TERM 1971 1538278 - 1538253 - R 88 -9.3 -4.30576 | opp_overlap 1538259 CTTTGATTATTAAAA TATATACTTAA CTAG TTAAGTATATA GAATAAATAAAACTA TERM 1972 1538313 - 1538286 - R 88 -8.6 -4.43576 | opp_overlap 1538291, overlap 1538291 AGTATATAGAATAAA TAAAACTAGGAA GGAA TTCCTAGTTTTT TATTGATTAAAGTGA TERM 1973 1538291 - 1538308 + r 100 -8.5 -5.5604 | opp_overlap 1538286 1538291 ATAGAATAAATAAAA CTAGGAA GGAA TTCCTAG TTTTTTATTGATTAA TERM 1974 1538308 - 1538291 - R 95 -8.5 -5.16038 | opp_overlap 1538291, overlap 1538286 ATAGAATAAATAAAA CTAGGAA GGAA TTCCTAG TTTTTTATTGATTAA rplA 1539009 - 1538320 - | 50S ribosomal protein L1 TERM 1975 1538349 - 1538363 + g 75 -8.6 -3.51032 | opp_overlap 1538329 GATCAACTTTGATAC CAACAC CTT GTGTTG TTGTAATTGAAAGGT TERM 1976 1538985 - 1538996 + g 77 -3 -5.4477 | TCTCAAGAGCAGCAC GTAA GTTT TTAC TTTTTTTAGCCATTT rplK 1539538 - 1539113 - | 50S ribosomal protein L11 TERM 1977 1539207 - 1539250 + g 73 -6.8 -4.3295 | AAATCTGGCATTTTA GTTTCAGCAATTTCTTGTAC TTGC GCACGAGTAATTGTTGCAAC TTTAGTTTTGTTAGG TERM 1978 1539283 - 1539324 + g 73 -6.5 -4.30844 | overlap 1539286 CACCTGATCCTTTTT CAACACCTGCAGCTTTTTT CAAA AGAACAGCAGCTGGTGGTG TTTTAGTGATGAAAT SAK_1545 1539800 - 1540966 + | ISSag9, transposase TERM 1979 1541046 - 1541030 - T 71 -8.1 -3.1875 | opp_overlap 1541025 1541024, overlap 1540995 CATAGCGGAACTTAA TCTGAAA CGC TTTCAGA TGAGGATGTTTTCTT TERM 1980 1541120 - 1541154 + T 95 -8.6 -5.30199 | opp_overlap 1541120 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 1981 1541154 - 1541120 - T 70 -4.2 -4.94902 | opp_overlap 1541120 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 1982 1541262 - 1541298 + T 100 -15.5 -4.59342 | opp_overlap 1541265 1541268, overlap 1541265 CCTTTTACATTATTA CAACAATACTTGAGATT TTG AATCTCAAGTATTGTTA TTTATTTATCCTCAA TERM 1983 1541295 - 1541265 - T 100 -17.2 -3.45849 | opp_overlap 1541265 1541262, overlap 1541268 TTTACATTATTACAA CAATACTTGAGATT TTG AATCTCAAGTATTG TTATTTATTTATCCT TERM 1984 1541265 - 1541295 + T 100 -17.2 -4.39652 | opp_overlap 1541265 1541268, overlap 1541262 TTTACATTATTACAA CAATACTTGAGATT TTG AATCTCAAGTATTG TTATTTATTTATCCT TERM 1985 1541292 - 1541268 - T 100 -13.1 -3.86266 | opp_overlap 1541265 1541262, overlap 1541265 ACATTATTACAACAA TACTTGAGATT TTG AATCTCAAGTA TTGTTATTTATTTAT SAK_1546 1542682 - 1541300 - | major facilitator family protein TERM 1986 1541401 - 1541385 - G 72 -9.5 -2.66118 | overlap 1541381 TTTAAAATTAATCCA CACAAAG CTG CTTTGTG AAAATCTGCATTACC SAK_1547 1543904 - 1542690 - | M20D family peptidase SAK_1548 1544162 - 1545067 + | LysR family transcriptional regulator TERM 1987 1545504 - 1545544 + F 100 -12.7 -4.47328 | opp_overlap 1545502 1545498 1545515 TGGATAAATTGAACT GCACCCCAAAAGTTAGA CAAAAAA TCTAACGATTGGGGTGC TTTTCTGATGAAATT SAK_1549 1545552 - 1546088 + | IS861, transposase orfA TERM 1988 1546888 - 1546856 - g 100 -12.2 -4.74084 | opp_overlap 1546856, overlap 1546845 AAAGCAAAACTAAAA GGACTTAGTCCTGT GCAAT ACAGAACTAAATCC TTCACTTAAAATAAA SAK_1550 1546064 - 1546897 + | IS861, transposase orfB pabB 1548661 - 1546946 - | para-aminobenzoate synthase, component I TERM 1989 1547493 - 1547471 - G 76 -9.2 -3.37344 | opp_overlap 1547466 1547464 CGCTGATTCAACTAA TCTCTCGACA TGT TGTTGAGAGA AAAGAAGTTTATTTT TERM 1990 1548708 - 1548735 + r 100 -10 -5.64873 | opp_overlap 1548708 TTATAACATAAAAAA CTAATCCGACAA TTTC TTGTCAGATTAG TTTTTTCTTATTCAC TERM 1991 1548735 - 1548708 - R 100 -12.2 -5.5208 | opp_overlap 1548708 TTATAACATAAAAAA CTAATCCGACAA TTTC TTGTCAGATTAG TTTTTTCTTATTCAC ftsK 1551184 - 1548743 - | DNA translocase FtsK SAK_1553 1551359 - 1552162 + | peptidyl-prolyl cis-trans isomerase, cyclophilin-type TERM 1992 1552200 - 1552175 - T 100 -13.5 -4.74801 | opp_overlap 1552175 TAATTCTATCAAAAA TGAGACTAGAA CATT TTCTAGTCTCA TTTTTTAACAACACT TERM 1993 1552175 - 1552200 + T 100 -13.5 -5.00884 | opp_overlap 1552175 TAATTCTATCAAAAA TGAGACTAGAA CATT TTCTAGTCTCA TTTTTTAACAACACT mtsC 1553047 - 1552214 - | metal ABC transporter, permease protein mtsB 1553765 - 1553049 - | metal ABC transporter, ATP-binding protein TERM 1994 1553782 - 1553815 + r 71 -8.4 -3.27382 | gap 2, opp_overlap 1553779 1553785, overlap 1553784 1553785 TTTCCTCCAAAAGTA GAA-TGGAG-CTGGTT ATAA AACCAGACTCCACTTC TCTGTATTTATTAAA TERM 1995 1553785 - 1553811 + r 81 -10.3 -2.83685 | gap 1, opp_overlap 1553779 1553785, overlap 1553784 1553782 CCTCCAAAAGTAGAA TGGAG-CTGGTT ATAA AACCAGACTCCA CTTCTCTGTATTTAT TERM 1996 1553811 - 1553785 - R 87 -10.3 -3.68359 | gap 1, opp_overlap 1553785 1553784 1553782, overlap 1553779 CCTCCAAAAGTAGAA TGGAG-CTGGTT ATAA AACCAGACTCCA CTTCTCTGTATTTAT mtsA 1554862 - 1553936 - | metal ABC transporter, metal-binding lipoprotein TERM 1997 1554207 - 1554226 + g 70 -6.4 -4.11773 | ATTTCCCAGATGTAT GCTGATGG AACT CCATAAGC TTTTGAGAAATATTT TERM 1998 1554393 - 1554407 + g 70 -2.8 -5.09895 | opp_overlap 1554395, overlap 1554395 GGATCTTTAGCAATT AATTGC TTA GCAATA TTTTTTGAGTAAATA TERM 1999 1554517 - 1554530 + g 81 -5.3 -5.18297 | CTCCATCGCTAACCG CAAAG TAAT CTTTG TTTTCTTTCTTCTTA TERM 2000 1554625 - 1554613 - G 70 -3.4 -5.00616 | opp_overlap 1554601 1554613 TTCCGTTGTAAAAAA CAAG GTCTG CTTG AGTTGTTTTTTCAAC TERM 2001 1554946 - 1554960 + H 78 -5.8 -4.81752 | opp_overlap 1554946 1554958, overlap 1554958 ATAACCTATTATAAA GTATTT GTC AAATAC TTTTTCAGTATTTTT SAK_1557 1555029 - 1555676 + | iron-dependent repressor TERM 2002 1555672 - 1555723 + T 86 -11.3 -2.73124 | gap 1, opp_overlap 1555659 1555685 1555687, overlap 1555685 TATATGTATCTGCTA CATAAATAAAAAAGTCCGTGTATT CATTA GATACACGGGCTTTTTTATA-ATG CTTTCAAAAATGCCA TERM 2003 1555685 - 1555711 + T 100 -9.5 -5.33785 | opp_overlap 1555685 1555687, overlap 1555672 TACATAAATAAAAAA GTCCGTGTATT CATTA GATACACGGGC TTTTTTATAATGCTT TERM 2004 1555711 - 1555685 - T 100 -6.6 -5.76237 | opp_overlap 1555685 1555672, overlap 1555687 TACATAAATAAAAAA GTCCGTGTAT TCATTAG ATACACGGGC TTTTTTATAATGCTT pfs 1556405 - 1555716 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SAK_1559 1556684 - 1556415 - | hypothetical protein SAK_1560 1557238 - 1556684 - | NUDIX family hydrolase TERM 2005 1557133 - 1557149 + g 78 -9.5 -3.56643 | overlap 1557131 AAACAAGTTCACGTT TGGATTG TCC CAATCCA TTTGGCAACTCTACA glmU 1558638 - 1557259 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 2006 1558546 - 1558533 - G 73 -6.7 -4.22652 | overlap 1558545 GCACACTACGGAAAA CATGC TCAA GCATG GTAATACCAGATACT TERM 2007 1558770 - 1558789 + r 84 -10.8 -3.07935 | opp_overlap 1558770, overlap 1558772 CAATTAGGAATAAAA TAGCTACC TTTT GGTAGCTA TTCAATACATGAAAT TERM 2008 1558789 - 1558770 - R 100 -10.8 -4.75219 | opp_overlap 1558770 1558772 CAATTAGGAATAAAA TAGCTACC TTTT GGTAGCTA TTCAATACATGAAAT TERM 2009 1558772 - 1558787 + r 74 -9 -3.09878 | opp_overlap 1558770, overlap 1558770 ATTAGGAATAAAATA GCTACC TTTT GGTAGC TATTCAATACATGAA SAK_1562 1559295 - 1558882 - | hypothetical protein SAK_1563 1559685 - 1559308 - | glyoxalase family protein TERM 2010 1559768 - 1559753 - R 100 -7.6 -5.43514 | opp_overlap 1559753 AAAATAAGTAAAAAA TGACTC AAAA GAGTCA TTTACTTATTTCGTT TERM 2011 1559753 - 1559768 + r 80 -7.6 -4.17274 | opp_overlap 1559753 AAAATAAGTAAAAAA TGACTC AAAA GAGTCA TTTACTTATTTCGTT SAK_1564 1560730 - 1559774 - | Gfo/Idh/MocA family oxidoreductase TERM 2012 1561079 - 1561091 + r 71 -7.7 -3.41527 | CTACAACTAACTTTG CCAGA AGA TCTGG TTCTGCTCCAAATTG fabG 1562115 - 1561417 - | 3-ketoacyl-(acyl-carrier-protein) reductase SAK_1567 1562344 - 1562108 - | hypothetical protein SAK_1568 1562682 - 1562434 - | hypothetical protein SAK_1569 1563380 - 1562880 - | acetyltransferase TERM 2013 1563549 - 1563592 + r 100 -22.2 -4.64844 | opp_overlap 1563552 1563561 TAGGCCAATTATTGA TAATCACTAAAAGAGCGTAG ATAA TTACGCTCTTTTAGTGATTA TTTTATATATATGAA TERM 2014 1563589 - 1563552 - R 100 -18.8 -3.39595 | opp_overlap 1563549, overlap 1563561 GCCAATTATTGATAA TCACTAAAAGAGCGTA GATAAT TACGCTCTTTTAGTGA TTATTTTATATATAT TERM 2015 1563580 - 1563561 - R 82 -7.9 -4.37527 | opp_overlap 1563549, overlap 1563552 TGATAATCACTAAAA GAGCGTA GATAAT TACGCTC TTTTAGTGATTATTT SAK_1570 1565032 - 1563620 - | glycosyl transferase, group 2 family protein TERM 2016 1564279 - 1564261 - G 72 -8.2 -3.62046 | CCACCGCTTTAACAA GGTCTTTC TTA AAAAGACC GAAAGCCCCCGAAAT SAK_1571 1567331 - 1565172 - | hypothetical protein SAK_1572 1568771 - 1567338 - | hypothetical protein SAK_1573 1569453 - 1568776 - | hypothetical protein TERM 2017 1569281 - 1569249 - G 77 -9.9 -3.24188 | opp_overlap 1569248 1569246, overlap 1569252 CTACATTATTACCAA TAACGGTCATTACTG TTG CAGTCAAGACCGTCA ATGTCATTAATGAAA TERM 2018 1569278 - 1569252 - G 81 -9.4 -3.75738 | opp_overlap 1569248 1569246, overlap 1569249 CATTATTACCAATAA CGGTCATTACTG TTG CAGTCAAGACCG TCAATGTCATTAATG SAK_1574 1570200 - 1569505 - | hypothetical protein TERM 2019 1570306 - 1570316 + r 75 -2.6 -5.60993 | opp_overlap 1570306 GTCAACAGGAAAATA TATA ATG TATA TTTTTTTATACGAAG TERM 2020 1570533 - 1570513 - R 100 -9.1 -5.37043 | opp_overlap 1570513 ATCTGATATAAAAAA GGCTAAAAC TAA GTTTTAACC TTTTTGACATATCTA TERM 2021 1570513 - 1570533 + r 79 -6.9 -4.65838 | opp_overlap 1570513 ATCTGATATAAAAAA GGCTAAAAC TAA GTTTTAACC TTTTTGACATATCTA brnQ 1571902 - 1570565 - | branched chain amino acid:H+ symporter TERM 2022 1571311 - 1571301 - G 70 -3.2 -5.00895 | overlap 1571306 GCTACTAGACAAAAA GCAA CTG CTGC AAGTGCATCAAGTGT TERM 2023 1572078 - 1572090 + r 80 -7.7 -4.27316 | opp_overlap 1572078 TTGAAAACAAAAAAA GAGCA TAA TGCTC TTTTCGATTAACCAA TERM 2024 1572090 - 1572078 - R 100 -7.7 -6.09196 | opp_overlap 1572078 TTGAAAACAAAAAAA GAGCA TAA TGCTC TTTTCGATTAACCAA metG 1574095 - 1572098 - | methionyl-tRNA synthetase TERM 2025 1573536 - 1573546 + g 70 -6.8 -4.10657 | AATTCTGGATGCTCA GCGT AGT ACGC TTTTAAACGATCTGC TERM 2026 1574112 - 1574128 + H 74 -3 -5.32882 | gap 1, opp_overlap 1574111 1574114 ATTTCTCCTATAAGC CACC-CT AATG AGAGGTG TTTTTTATCATGATA SAK_1577 1574238 - 1575113 + | tellurite resistance protein TehB TERM 2027 1575109 - 1575142 + T 100 -12.7 -3.94002 | opp_overlap 1575111 1575116, overlap 1575111 1575116 CTCGAAAATTAAGAT CATAAAAGTGAGTAG AAAT CTACTCACTTTTATC TTTGGTTAGGTAATA TERM 2028 1575111 - 1575140 + T 100 -15.3 -3.55604 | opp_overlap 1575111 1575116, overlap 1575109 1575116 CGAAAATTAAGATCA TAAAAGTGAGTAG AAAT CTACTCACTTTTA TCTTTGGTTAGGTAA TERM 2029 1575140 - 1575111 - T 100 -15.3 -2.85583 | opp_overlap 1575111 1575109 1575116, overlap 1575116 CGAAAATTAAGATCA TAAAAGTGAGTAG AAAT CTACTCACTTTTA TCTTTGGTTAGGTAA TERM 2030 1575116 - 1575135 + T 100 -10.8 -4.84539 | opp_overlap 1575111 1575116, overlap 1575111 1575109 ATTAAGATCATAAAA GTGAGTAG AAAT CTACTCAC TTTTATCTTTGGTTA TERM 2031 1575135 - 1575116 - T 100 -10.8 -4.55625 | opp_overlap 1575116 1575111 1575109, overlap 1575111 ATTAAGATCATAAAA GTGAGTAG AAAT CTACTCAC TTTTATCTTTGGTTA SAK_1578 1575966 - 1575271 - | hypothetical protein TERM 2032 1575922 - 1575902 - G 72 -4 -4.90525 | gap 1, overlap 1575904 1575906 TAACCTGAAATAAAA CAGA-GTGC AACC GCACACCTG AGCCCTTCATATATT TERM 2033 1577091 - 1577081 - g 73 -5.4 -4.61231 | opp_overlap 1577081 1577079 1577071 TTATACTGTTAAAAA TAGC TTT GCTA TGTTTGGCGGTATTG SAK_1579 1576302 - 1577519 + | PTS system putative lactose/cellobiose family IIC subunit TERM 2034 1577763 - 1577749 - g 72 -3.6 -5.055 | TTAACTGTCAAAAAA GACAAT AGC ATTATC TACAATGGACAAATT SAK_1580 1577503 - 1578345 + | hypothetical protein TERM 2035 1578918 - 1578902 - g 78 -6.6 -4.70659 | TTGGATAGTCAAAAA CCTGTT CTAGC AACAGG TGACTATAACGTAGC xth 1578422 - 1579249 + | exodeoxyribonuclease III TERM 2036 1579285 - 1579260 - T 100 -13.5 -5.75822 | opp_overlap 1579260 TATAAACCAAAAAAA GATGATTGAGT TATA ACTCAATCATC TTTTTATACTAAGTT TERM 2037 1579260 - 1579285 + T 100 -13.5 -4.92783 | opp_overlap 1579260 TATAAACCAAAAAAA GATGATTGAGT TATA ACTCAATCATC TTTTTATACTAAGTT SAK_1582 1579645 - 1579289 - | hypothetical protein TERM 2038 1579577 - 1579591 + g 84 -4.3 -5.52384 | TTCAAAAGTCAAGCC GAGTT CAGTT AACTC TTTTTTTGCTGAACG SAK_1583 1580123 - 1579647 - | methylated-DNA--protein-cysteine S-methyltransferase, putative TERM 2039 1580166 - 1580145 - R 74 -5.2 -4.78752 | opp_overlap 1580134 1580145 1580147, overlap 1580132 1580137 AGCATAACTTAAAAA GCCATGAA AAGCAA TTCATGAC TTTTTAGTTCTTTAT SAK_1584 1581359 - 1580178 - | D-3-phosphoglycerate dehydrogenase, putative SAK_1585 1581970 - 1581422 - | acetyltransferase TERM 2040 1583111 - 1583097 - H 81 -10 -3.01712 | CTGGTTTTGGTAAGA CTGCAG GAC CTGCAG AAAAATTATAAATTG SAK_1587 1583263 - 1583898 + | CutC family protein TERM 2041 1583977 - 1583946 - T 78 -9.6 -3.22774 | TATATTTACTACTAA GTTCTCTCATGTTT TCTA AAACCTGAAAGAAC CGGAATAAGAGCATA TERM 2042 1584079 - 1584093 + T 76 -7.2 -4.18488 | ATTTTAAGGAAATTG GAAGTA TCT TACTTC TTTATTCCAATAGCT TERM 2043 1584120 - 1584160 + T 100 -12.3 -3.86312 | gap 1, opp_overlap 1584122 1584127, overlap 1584127 AGCTAAATCGGAGAT TATAAAA-GGTTGCCAAA TTTTTC TTTGGCAACCTTTTTATA TTATTACTTATAAAT TERM 2044 1584157 - 1584122 - T 87 -12.1 -2.65766 | opp_overlap 1584120 1584127, overlap 1584127 CTAAATCGGAGATTA TAAAAGGTTGCCAAA TTTTTC TTTGGCAACCTTTTT ATATTATTACTTATA TERM 2045 1584127 - 1584152 + T 100 -12 -5.2015 | opp_overlap 1584127 1584122, overlap 1584120 TCGGAGATTATAAAA GGTTGCCAAA TTTTTC TTTGGCAACC TTTTTATATTATTAC TERM 2046 1584152 - 1584127 - T 100 -12 -4.50976 | opp_overlap 1584120 1584127, overlap 1584122 TCGGAGATTATAAAA GGTTGCCAAA TTTTTC TTTGGCAACC TTTTTATATTATTAC SAK_1588 1585031 - 1584168 - | tetrapyrrole methylase family protein TERM 2047 1584545 - 1584565 + g 75 -6.9 -4.2204 | overlap 1584541 GTGTTTCAGGGTAAT CTTGCTTTG TTT CAAAGAAAG TTATTTGTTGACCTT SAK_1589 1585363 - 1585037 - | DNA replication intiation control protein YabA TERM 2048 1585257 - 1585272 + g 73 -3.3 -5.0917 | AGAACAGTATTCTCC TCCAA TAATTT TTGGA TTTGTTTTTTCATAG holB 1586256 - 1585393 - | DNA polymerase III subunit delta' TERM 2049 1585897 - 1585910 + g 78 -5.3 -5.04987 | CAAAAGACTGTTGGC TGCAT TGAC ATGCA TTTTTTCGCAATCTT TERM 2050 1586196 - 1586175 - G 82 -6.7 -5.01732 | gap 1 AATTTCCCGAAAAAA GATAGGCATG ACT CAT-CCTATC TGACTGTAAAATAGT tdk 1586911 - 1586276 - | thymidylate kinase TERM 2051 1586991 - 1586965 - H 100 -6.6 -5.54894 | opp_overlap 1586965 AATTTATCAAAAAAA GACACCCACAAC TTG ATTGTGCATGTC TGATATTTTTAAGAG SAK_1592 1587120 - 1588286 + | ISSag9, transposase TERM 2052 1588366 - 1588350 - T 71 -8.1 -3.1875 | opp_overlap 1588345 1588344, overlap 1588315 CATAGCGGAACTTAA TCTGAAA CGC TTTCAGA TGAGGATGTTTTCTT TERM 2053 1588474 - 1588440 - T 70 -4.2 -4.94902 | opp_overlap 1588440 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT TERM 2054 1588440 - 1588474 + T 95 -8.6 -5.30199 | opp_overlap 1588440 CAAGTATTATAAAAA CCAACGGAACTTAGTC TGA GACGGATTTTCGTTGG TTTTTATTGGTTTTT SAK_1593 1589210 - 1588551 - | CBS domain-containing protein livF 1589939 - 1589229 - | hydrophobic amino acid uptake ABC transporter, ATP-binding protein LivF livG 1590703 - 1589939 - | hydrophobic amino acid uptake ABC transporter, ATP-binding protein LivG livM 1591657 - 1590704 - | hydrophobic amino acid uptake ABC transporter, permease LivM livH 1592529 - 1591660 - | hydrophobic amino acid uptake ABC transporter, permease LivH TERM 2055 1592763 - 1592775 + r 72 -3.4 -5.22312 | opp_overlap 1592757, overlap 1592757 CTTTAAAATCTTTCA GCTT AGCTA AAGC TTTTTTAATATCAAT TERM 2056 1593388 - 1593424 + r 87 -8.7 -4.21408 | overlap 1593392 GACTAAATTGTCTTG TGTCGCAGCAGGTGCAA TCA TTGGAACTGCTGCTGCA TTTACTTTTGGAGTT TERM 2057 1593392 - 1593420 + r 80 -10.3 -2.75863 | overlap 1593388 AAATTGTCTTGTGTC GCAGCAGGTGCAA TCA TTGGAACTGCTGC TGCATTTACTTTTGG TERM 2058 1593930 - 1593910 - R 79 -2.6 -5.74086 | opp_overlap 1593910 AAACTAAATAAAAAA GAAGGA CATCTGAAC TCCTTC TTTCTAATAACTACT SAK_1599 1594201 - 1593956 - | hypothetical protein TERM 2059 1594194 - 1594204 + g 74 -2.6 -5.42514 | overlap 1594181 CCTAAACGCTCTTGT TTAT TCA ATAA TTTTTTCCTTTCTGC TERM 2060 1594284 - 1594271 - R 95 -5.3 -6.08342 | opp_overlap 1594271 CAACAAATAAAAAAA GAGTT GGTA AACTC AACTCTTTTAAATCT clpP 1594891 - 1594301 - | ATP-dependent Clp protease proteolytic subunit TERM 2061 1594974 - 1594999 + r 74 -7.7 -3.77588 | gap 1, opp_overlap 1594974, overlap 1594960 1594969 ACTTTTTTAAGAAAA GGC-TTTCTGAG TTC TTCAGAAAAGCC TTATTCATCTCAAAT TERM 2062 1594999 - 1594974 - R 79 -7 -4.63486 | gap 1, opp_overlap 1594960 1594969 1594974 ACTTTTTTAAGAAAA GGC-TTTCTGA GTTCT TCAGAAAAGCC TTATTCATCTCAAAT upp 1595645 - 1595016 - | uracil phosphoribosyltransferase SAK_1602 1596924 - 1595755 - | aminotransferase, classes I and II TERM 2063 1597051 - 1597031 - R 83 -6.9 -4.79451 | opp_overlap 1597031 ATTCTAAAGATAAAA GTGACCATT TTA AACGATCAC TTTCTTTATTATTTT SAK_1603 1597608 - 1597060 - | RNA methyltransferase SAK_1604 1599133 - 1597781 - | amino acid-polyamine-organocation (APC) family permease TERM 2064 1599256 - 1599223 - H 87 -12.1 -2.78816 | gap 1, opp_overlap 1599221 1599212 TTATTTTTCACCAGA TTCTGATAAGAG-AAT CAT ATTACTCTTATCAGAA AGATGAAAACGTTTT TERM 2065 1599451 - 1599440 - g 76 -2.2 -5.49579 | TGAGAAAAAAGAAAA CGTC CTTA AACG TGTCACTAAACAGCA trkA 1599339 - 1600688 + | potassium transporter peripheral membrane component SAK_1606 1600693 - 1602132 + | K+ transporter (Trk) family protein TrkH, putative TERM 2066 1602180 - 1602140 - T 100 -21.7 -4.11884 | opp_overlap 1602143 1602148, overlap 1602143 1602148 AACTATAATTACAAA TAATAAAACGGATATATCA ATC TGATATATCCGTTTTATTA CGTCTTAAGCTAAAA TERM 2067 1602143 - 1602177 + T 100 -19 -3.19026 | opp_overlap 1602140 1602143 1602148, overlap 1602148 TATAATTACAAATAA TAAAACGGATATATCA ATC TGATATATCCGTTTTA TTACGTCTTAAGCTA TERM 2068 1602177 - 1602143 - T 100 -19 -4.16837 | opp_overlap 1602143 1602148, overlap 1602140 1602148 TATAATTACAAATAA TAAAACGGATATATCA ATC TGATATATCCGTTTTA TTACGTCTTAAGCTA TERM 2069 1602148 - 1602172 + T 100 -14.5 -4.71776 | opp_overlap 1602143 1602140 1602148, overlap 1602143 TTACAAATAATAAAA CGGATATATCA ATC TGATATATCCG TTTTATTACGTCTTA TERM 2070 1602172 - 1602148 - T 100 -14.5 -5.05116 | opp_overlap 1602148 1602143, overlap 1602143 1602140 TTACAAATAATAAAA CGGATATATCA ATC TGATATATCCG TTTTATTACGTCTTA SAK_1607 1602407 - 1602156 - | hypothetical protein rluB 1603129 - 1602407 - | ribosomal large subunit pseudouridine synthase B scpB 1603703 - 1603119 - | segregation and condensation protein B scpA 1604407 - 1603700 - | segregation and condensation protein A xerD 1605147 - 1604407 - | site-specific tyrosine recombinase XerD-like protein SAK_1612 1605610 - 1605137 - | CBS domain-containing protein SAK_1613 1606128 - 1605607 - | hypothetical protein rdgB 1607084 - 1606110 - | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein murI 1607875 - 1607081 - | glutamate racemase TERM 2071 1607905 - 1607929 + r 83 -10.8 -2.89564 | gap 1, opp_overlap 1607905, overlap 1607907 TATTAGTGACTAAAA GAGGCT-GGAC AACA GTCCTAGCCTC TCTATACAATAACCA TERM 2072 1607929 - 1607905 - R 100 -10.8 -4.28994 | gap 1, opp_overlap 1607905 1607907 TATTAGTGACTAAAA GAGGCT-GGAC AACA GTCCTAGCCTC TCTATACAATAACCA SAK_1616 1608289 - 1608050 - | hypothetical protein SAK_1617 1608989 - 1608447 - | hypothetical protein TERM 2073 1609053 - 1609020 - R 100 -19.9 -4.57755 | opp_overlap 1609020 1609023 AGCTATTATACAAAA TAACCTTACAGGTGT AAAG ACACCTGTAAGGTTA TTTGTCTATGTATAA TERM 2074 1609020 - 1609053 + r 100 -19.9 -4.19483 | opp_overlap 1609020, overlap 1609023 AGCTATTATACAAAA TAACCTTACAGGTGT AAAG ACACCTGTAAGGTTA TTTGTCTATGTATAA TERM 2075 1609023 - 1609050 + r 100 -17.2 -4.2028 | opp_overlap 1609020, overlap 1609020 TATTATACAAAATAA CCTTACAGGTGT AAAG ACACCTGTAAGG TTATTTGTCTATGTA SAK_1618 1609572 - 1609051 - | 3H domain-containing protein TERM 2076 1609633 - 1609613 - R 100 -10.5 -4.93365 | overlap 1609626 TTTCACAATTAAAAA CTGGCTAGA ATA TCTAACCAG TTAGCCTCAATCATT SAK_1619 1610329 - 1609640 - | hypothetical protein TERM 2077 1610301 - 1610282 - G 74 -3.6 -5.16237 | opp_overlap 1610281 1610282, overlap 1610283 AATCTTAGCAAAAAA TTGATTCA GCCC TGAATCAG ATTGTGTGTAAATGA SAK_1620 1610855 - 1610352 - | hypothetical protein SAK_1621 1611636 - 1610893 - | RNA methyltransferase SAK_1622 1611668 - 1611946 + | acylphosphatase SAK_1623 1612031 - 1612963 + | OxaA-like protein precursor TERM 2078 1613063 - 1613033 - T 83 -5.7 -5.29385 | gap 2, opp_overlap 1613033 AATTCAAGTAAAAAA GACTTAGTTCTATGT CCT ACATAG--CTAAGTC TTTTTAGTTTTGCCT TERM 2079 1613033 - 1613063 + T 80 -5.7 -5.10154 | gap 2, opp_overlap 1613033 AATTCAAGTAAAAAA GACTTAGTTCTATGT CCT ACATAG--CTAAGTC TTTTTAGTTTTGCCT TERM 2080 1613135 - 1613096 - T 100 -10.2 -4.96848 | CTTTTCATATAAAAA GCACCCTAAAAGTCAGAT AAAA ATCTAGCTTTTAAAGTGC AAGTAATCTAGCTAA SAK_1624 1613828 - 1613163 - | polar amino acid ABC transporter permease SAK_1625 1614709 - 1613852 - | polar amino acid ABC transporter polar amino acid-binding protein TERM 2081 1614205 - 1614217 + g 78 -7.7 -4.28651 | overlap 1614212 CATAAATAACAGGTT CAGCA CCT TGCTG TTTTGCAATTTTCAT SAK_1626 1616330 - 1614870 - | amidase TERM 2082 1615596 - 1615619 + g 70 -3.2 -5.00616 | gap 1, opp_overlap 1615596, overlap 1615599 TTTACTAACGCTAAA CTC-GAAAAGA CTC TCTTTGCTGAG TTTTTTCAGGGGAAA TERM 2083 1616420 - 1616388 - R 100 -10.1 -5.54264 | opp_overlap 1616385 1616388 1616390 1616393 1616398 AAATACTTAAAAAAA TAGAATAACGTCTAG ACT CTAGATATTATTCTA TGATTTATACTATTA TERM 2084 1616388 - 1616420 + r 81 -10.1 -3.06651 | opp_overlap 1616388, overlap 1616385 1616390 1616393 1616398 AAATACTTAAAAAAA TAGAATAACGTCTAG ACT CTAGATATTATTCTA TGATTTATACTATTA TERM 2085 1616390 - 1616418 + r 70 -8.3 -3.07856 | opp_overlap 1616388, overlap 1616388 1616385 1616393 1616398 ATACTTAAAAAAATA GAATAACGTCTAG ACT CTAGATATTATTC TATGATTTATACTAT greA 1616915 - 1616433 - | transcription elongation factor GreA TERM 2086 1616984 - 1616954 - R 85 -10.7 -3.46068 | opp_overlap 1616960, overlap 1616960 TTTTCAAGTCAAAGA TATAAACATGATG ACTCG CACCATGTTTATA AGCTTAGTTAATTTG SAK_1628 1618790 - 1616988 - | hypothetical protein TERM 2087 1618630 - 1618646 + g 81 -8.7 -4.04773 | overlap 1618638 TCTGCCATCAATTGT GCTGTTC TGC GAGCAGC TTCTTTGGCTTCTTG SAK_1629 1619380 - 1618877 - | acetyltransferase TERM 2088 1619454 - 1619431 - R 76 -9.6 -3.04598 | ATAAAGTCAGATAGA GGACTGAGAA ACTT CTCTCAGCCC TTACCATCAACTTAT murC 1620797 - 1619466 - | UDP-N-acetylmuramate--L-alanine ligase SAK_1631 1621424 - 1620807 - | hypothetical protein TERM 2089 1620845 - 1620856 + g 76 -5.8 -4.55697 | TCAGATTTAATTCTT GAGC CTTG GCTC TTTCTTTATGAAACT SAK_1632 1621527 - 1621429 - | hypothetical protein TERM 2090 1621531 - 1621568 + r 84 -10.2 -3.4178 | opp_overlap 1621540, overlap 1621546 TTTTTCATTCATTTA TATAAAAAAGAAAGCG AGAGAC CACTTTCTTTTTTATA TTATAGTCACATCAT TERM 2091 1621559 - 1621540 - R 82 -5 -5.38047 | opp_overlap 1621531 1621546 CATTTATATAAAAAA GAAAGCGA GAGA CCACTTTC TTTTTTATATTATAG TERM 2092 1621546 - 1621559 + r 77 -3.1 -5.5208 | opp_overlap 1621540, overlap 1621531 TATAAAAAAGAAAGC GAGAG ACCA CTTTC TTTTTTATATTATAG SAK_1633 1624687 - 1621589 - | Snf2 family protein TERM 2093 1621942 - 1621962 + g 73 -6.2 -4.49337 | TTTCATGACGTTCAT TTGCTGGT GTAGA ACCAGTAA TTTTATAAGTTGTAA TERM 2094 1624814 - 1624793 - R 84 -3.7 -5.80003 | GTAACAAATAAAAAA GGCTAAAAC AACT GTCCTAACC TTCTATTTCAATTTC engA 1626152 - 1624842 - | GTP-binding protein EngA TERM 2095 1624975 - 1624964 - G 74 -4.4 -5.06414 | opp_overlap 1624972, overlap 1624972 CTTCGTTAACAAAAA CAAC GAAA GTTG GTGGTTTAACAGCAA TERM 2096 1625235 - 1625249 + g 71 -5 -4.69664 | AGCTTCCCACTGACT GACAGT ATG ATTGTC TTTTTCGATAGTATC dnaI 1627102 - 1626200 - | primosomal protein DnaI SAK_1636 1628274 - 1627099 - | hypothetical protein SAK_1637 1628753 - 1628274 - | transcriptional regulator NrdR TERM 2097 1628898 - 1628862 - R 70 -4.6 -4.91977 | opp_overlap 1628865 1628890, overlap 1628865 TATCAAAACACAAAA TAATCCTTATGCCT TTTATCATT AAGCATAAGGATTT TTCTTATATTTCTTT TERM 2098 1628865 - 1628895 + r 77 -4.1 -5.33331 | opp_overlap 1628862 1628865, overlap 1628890 CAAAACACAAAATAA TCCTTATGCCT TTTATCATT AAGCATAAGGA TTTTTCTTATATTTC TERM 2099 1628895 - 1628865 - R 74 -6.3 -4.52747 | opp_overlap 1628865 1628890, overlap 1628862 CAAAACACAAAATAA TCCTTATGCCT TTTATCATT AAGCATAAGGA TTTTTCTTATATTTC SAK_1638 1630407 - 1628902 - | sensor histidine kinase CsrS, putative TERM 2100 1630042 - 1630032 - G 73 -2.4 -5.26316 | TCAGTGTAGAAAAAA CTGG TTT CCTG TTGACATCGTATAGG TERM 2101 1630226 - 1630196 - G 100 -17.8 -3.60627 | opp_overlap 1630196, overlap 1630181 TCATCGGATGTCAAA CTAGAGTTCGCTTG CGA CAAACGAACTCTAG TTTTTTCTAATGACC TERM 2102 1630196 - 1630226 + g 100 -15.6 -5.31275 | opp_overlap 1630181 1630196 TCATCGGATGTCAAA CTAGAGTTCGCTTG CGA CAAACGAACTCTAG TTTTTTCTAATGACC csrR 1631086 - 1630397 - | DNA-binding response regulator CsrR SAK_1640 1631854 - 1631321 - | hypothetical protein TERM 2103 1631951 - 1631920 - R 100 -11 -5.40072 | overlap 1631925 TTTGTCTTAAAAAAA CAAAACGCAAGGCA TAGC TACCCTACGTTTTG TTAACGACTACATAT TERM 2104 1631946 - 1631925 - R 85 -5.1 -5.55855 | overlap 1631920 CTTAAAAAAACAAAA CGCAAGGCA TAGC TACCCTACG TTTTGTTAACGACTA htpX 1632849 - 1631959 - | heat shock protein HtpX TERM 2105 1632476 - 1632492 + g 71 -8.7 -3.27808 | overlap 1632478 GCTAATAGGCCTGTC GTTGCTG CAA CAGCAGC ATTTTCTGGCTTAGA TERM 2106 1632478 - 1632493 + g 90 -9 -4.4715 | overlap 1632476 TAATAGGCCTGTCGT TGCTGC AACA GCAGCA TTTTCTGGCTTAGAG SAK_1642 1633424 - 1632870 - | LemA family protein TERM 2107 1633403 - 1633393 - G 75 -5.4 -4.82212 | opp_overlap 1633393 CAAATAACAAACAAA GCAA TAA TTGC TATTAAAATCATAGT gidB 1633552 - 1634265 + | glucose-inhibited division protein B SAK_1644 1634280 - 1635659 + | K+ transporter (Trk) family protein SAK_1645 1635672 - 1636343 + | Trk family potassium uptake protein TERM 2108 1636380 - 1636350 - T 100 -10 -4.99947 | opp_overlap 1636357, overlap 1636357 TTTAACTAAAGAAAA TAAAAAACTGAC TATTAAG GTCAGTTTTTTA TTGCCATGGGTTATA TERM 2109 1636373 - 1636357 - T 88 -3.7 -5.95449 | opp_overlap 1636357, overlap 1636350 AAAGAAAATAAAAAA CTGAC TATTAAG GTCAG TTTTTTATTGCCATG TERM 2110 1636357 - 1636373 + T 81 -4.4 -5.46657 | opp_overlap 1636357 1636350 AAAGAAAATAAAAAA CTGACT ATTAA GGTCAG TTTTTTATTGCCATG SAK_1646 1637208 - 1636378 - | nickel/cobalt ABC transporter permease protein TERM 2111 1636496 - 1636511 + g 74 -2.6 -5.26119 | gap 1, overlap 1636498 TCCAAAGATTGCTTA GA-GTAC CAA GTACGTC TTTTATTTTTACCAA SAK_1647 1638877 - 1637201 - | ABC transporter, ATP-binding protein TERM 2112 1638649 - 1638627 - G 78 -10.7 -3.09117 | overlap 1638624 1638629 GTAGAAACTAAATGA GACTTGTCA TATAT TGACAAGTC AAAAGCATTTTTATG SAK_1648 1639442 - 1638894 - | hypothetical protein TERM 2113 1639286 - 1639276 - G 79 -3.2 -5.5943 | AAACCAGTAAAAAAA CCAA CTC CTGG TCCATAAATAACTGC TERM 2114 1639601 - 1639577 - R 88 -6.5 -5.32699 | TTAAATACCAAAAAA GATCTCAGATA GAA TACCTAAGACC TTCATTAGTTTATTT ygjU 1640819 - 1639611 - | serine/threonine transporter SstT TERM 2115 1641595 - 1641618 + H 71 -8.2 -3.27271 | opp_overlap 1641598, overlap 1641590 1641594 TTCAGGGGTATGGTA CAATGGATGC CCTT GCATCAATTG CTTTTGCTATTATCG TERM 2116 1642371 - 1642389 + H 73 -4.6 -5.09259 | opp_overlap 1642371 1642366, overlap 1642366 GCATAATAATTTAAA GCAGTA CGAAAAT TACTGC TTTTATTTTAAAATA TERM 2117 1642616 - 1642644 + G 78 -8.9 -3.68351 | CATATCCTTGGTGGC GATGTTCCTGCTT GTA AACCAGGAACAAC TTTAGGTCATGAAGG SAK_1651 1642475 - 1643530 + | alcohol dehydrogenase, zinc-containing TERM 2118 1643585 - 1643542 - T 100 -17.2 -3.62591 | opp_overlap 1643552, overlap 1643552 CTGATAATTTTTAAA CAAATAAAAATGTGAGAAGA ATAG CCTTCTCACATTTTTATTTA TGACTCAAGCGACGT TERM 2119 1643552 - 1643575 + T 100 -9.7 -5.38958 | opp_overlap 1643542 1643552 TTAAACAAATAAAAA TGTGAGAAG AATAGC CTTCTCACA TTTTTATTTATGACT TERM 2120 1643575 - 1643552 - T 100 -10.4 -5.5454 | opp_overlap 1643552, overlap 1643542 TTAAACAAATAAAAA TGTGAGAAGA ATAG CCTTCTCACA TTTTTATTTATGACT metI 1644271 - 1643579 - | D-methionine ABC transporter, permease protein SAK_1653 1645338 - 1644268 - | amino acid ABC transporter, ATP-binding protein, putative SAK_1654 1646707 - 1645331 - | hypothetical protein SAK_1655 1647665 - 1646841 - | NLPA family lipoprotein TERM 2121 1647775 - 1647796 + r 77 -4.5 -5.16071 | opp_overlap 1647775, overlap 1647769 CTATATAACAAAAAA CTAAGGA TTGACATC TCCTTAG TTTTTATTACTACTT TERM 2122 1647796 - 1647775 - R 83 -4.5 -5.60689 | opp_overlap 1647775 1647769 CTATATAACAAAAAA CTAAGGA TTGACATC TCCTTAG TTTTTATTACTACTT SAK_1656 1648639 - 1647806 - | amino acid ABC transporter, amino acid-binding protein, putative SAK_1657 1649430 - 1648741 - | glutamine amidotransferase class I TERM 2123 1649551 - 1649580 + r 75 -5.1 -5.04385 | opp_overlap 1649556, overlap 1649556 AACTCTCACAAAAAT AAAAACCATAGTA TTAA TACTACGGTTTTA TTTTTTAGAAATCTG TERM 2124 1649556 - 1649575 + r 82 -5 -5.42198 | opp_overlap 1649556, overlap 1649551 TCACAAAAATAAAAA CCATAGTA TTAA TACTACGG TTTTATTTTTTAGAA TERM 2125 1649575 - 1649556 - R 100 -7.2 -5.69262 | opp_overlap 1649556 1649551 TCACAAAAATAAAAA CCATAGTA TTAA TACTACGG TTTTATTTTTTAGAA SAK_1658 1650301 - 1649585 - | hypothetical protein SAK_1659 1651207 - 1650419 - | dihydroxyacetone kinase DAK1 domain-containing protein SAK_1660 1651951 - 1651415 - | transcriptional regulator, putative TERM 2126 1651551 - 1651595 + g 72 -8.1 -3.55447 | opp_overlap 1651549 1651546, overlap 1651552 TTAATAAATGTAACT CTTTCTTTCTGATTAAAGTTA GAT TTACTATAATCAGAAAGAAGC TTATCTACTAACTGC TERM 2127 1651552 - 1651594 + g 81 -11.6 -2.72947 | opp_overlap 1651549 1651546, overlap 1651551 TAATAAATGTAACTC TTTCTTTCTGATTAAAGTTA GAT TTACTATAATCAGAAAGAAG CTTATCTACTAACTG SAK_1661 1652015 - 1652128 + | hypothetical protein SAK_1662 1652125 - 1653114 + | dihydroxyacetone kinase DAK1 domain-containing protein TERM 2128 1653667 - 1653679 + G 76 -6.3 -4.65747 | opp_overlap 1653666 CTCAGTAGGACACAT TGATC CAG GATCA TTTTCTTCAGGATTA SAK_1663 1653152 - 1653730 + | dihydroxyacetone kinase DAK2 domain-containing protein SAK_1664 1653730 - 1654104 + | hypothetical protein TERM 2129 1654349 - 1654365 + G 70 -6.5 -4.05446 | overlap 1654346 TTGGAGCAATTTCTT GGGGACA AGT TATCCCC TTTATCATTGCACAG TERM 2130 1654394 - 1654408 + G 71 -5 -4.54821 | opp_overlap 1654394, overlap 1654396 AGATGTTAGGAGCAA TGGTTG CGG CAACTA TTTTATGGTTACACT glpF 1654114 - 1654827 + | glycerol uptake facilitator protein TERM 2131 1654857 - 1654836 - T 100 -11.7 -5.27477 | opp_overlap 1654836 AGTTTAACTAAAAAA CCAGAAAGT TAAT ACTTTCTGG TTTTTCATAGTTGCA TERM 2132 1654836 - 1654857 + T 100 -11.7 -4.81083 | opp_overlap 1654836 AGTTTAACTAAAAAA CCAGAAAGT TAAT ACTTTCTGG TTTTTCATAGTTGCA TERM 2133 1654921 - 1654887 - T 71 -6.6 -4.08945 | overlap 1654889 1654896 AGTATGCTTTCAAAA TAGAAAAAACACCAAA ATA CTTAGTGTTCTTTCTG GAGATTTTATGAAAA TERM 2134 1654919 - 1654889 - T 80 -9.2 -3.6422 | overlap 1654887 1654896 TATGCTTTCAAAATA GAAAAAACACCAAA ATA CTTAGTGTTCTTTC TGGAGATTTTATGAA TERM 2135 1654912 - 1654896 - T 79 -3.7 -5.63645 | overlap 1654889 1654887 TCAAAATAGAAAAAA CACCAAA ATA CTTAGTG TTCTTTCTGGAGATT TERM 2136 1655046 - 1655091 + T 100 -15.1 -4.15998 | opp_overlap 1655052 1655053 1655060, overlap 1655053 1655060 CCAAGAAATGACTAC TATTAAGCTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAGTCTAGTA TTATTTAGTTTCAGT TERM 2137 1655085 - 1655052 - T 100 -14.1 -3.2396 | opp_overlap 1655046 1655053 1655060, overlap 1655053 1655060 AATGACTACTATTAA GCTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAGT CTAGTATTATTTAGT TERM 2138 1655053 - 1655084 + T 100 -17.6 -2.9961 | opp_overlap 1655052 1655053 1655060, overlap 1655046 1655060 ATGACTACTATTAAG CTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAG TCTAGTATTATTTAG TERM 2139 1655084 - 1655053 - T 100 -17.6 -2.53894 | opp_overlap 1655053 1655046 1655060, overlap 1655052 1655060 ATGACTACTATTAAG CTAAAAAGCGCTAT TGAC ATAGCGCTTTTTAG TCTAGTATTATTTAG TERM 2140 1655077 - 1655060 - T 100 -9.9 -4.7629 | opp_overlap 1655060 1655053 1655046, overlap 1655053 1655052 CTATTAAGCTAAAAA GCGCTAT TGAC ATAGCGC TTTTTAGTCTAGTAT TERM 2141 1655060 - 1655077 + T 100 -9.9 -4.83269 | opp_overlap 1655053 1655052 1655060, overlap 1655053 1655046 CTATTAAGCTAAAAA GCGCTAT TGAC ATAGCGC TTTTTAGTCTAGTAT SAK_1666 1655496 - 1655092 - | hypothetical protein SAK_1667 1656348 - 1655635 - | MerR family transcriptional regulator TERM 2142 1655820 - 1655847 + g 75 -8.6 -3.63627 | overlap 1655823 TCTGAACTTGTTTTT GAACTTTCTC ATCTGTCG GAGAAAGTTC TTTCAACTGTCCAAA SAK_1668 1657550 - 1656441 - | hypothetical protein TERM 2143 1656486 - 1656475 - G 78 -5.8 -4.84761 | opp_overlap 1656474 ACAGGTTGATAAAAA GGGA TACG TCCC CATGTTTGCTCTGCT SAK_1669 1657798 - 1657547 - | hypothetical protein SAK_1670 1658555 - 1657821 - | hypothetical protein TERM 2144 1658614 - 1658599 - R 90 -9 -4.59109 | opp_overlap 1658599 TACATCTCTCAAAAA GCAGTC CCAA GACTGC TTAGCTTTATTCTGT TERM 2145 1658599 - 1658614 + r 78 -9 -3.4055 | opp_overlap 1658599 TACATCTCTCAAAAA GCAGTC CCAA GACTGC TTAGCTTTATTCTGT TERM 2146 1658673 - 1658636 - R 72 -7.1 -3.86346 | opp_overlap 1658638, overlap 1658638 TTATTCTGTCATAAA GACTTCAGCATCAAGCA ATGG TGCTTCATGCCAAAGTT TTTCAAGGTTATAGT TERM 2147 1658671 - 1658638 - R 80 -9.7 -3.52113 | opp_overlap 1658638, overlap 1658636 ATTCTGTCATAAAGA CTTCAGCATCAAGCA ATGG TGCTTCATGCCAAAG TTTTTCAAGGTTATA TERM 2148 1658638 - 1658671 + r 71 -5.3 -4.63542 | opp_overlap 1658638 1658636 ATTCTGTCATAAAGA CTTCAGCATCAAGCA ATGG TGCTTCATGCCAAAG TTTTTCAAGGTTATA SAK_1671 1658977 - 1658621 - | iojap-related protein SAK_1672 1659500 - 1658979 - | isochorismatase family protein SAK_1673 1660150 - 1659563 - | HD domain-containing protein nadD 1660779 - 1660147 - | nicotinic acid mononucleotide adenylyltransferase SAK_1675 1661226 - 1660909 - | hypothetical protein SAK_1676 1662437 - 1661319 - | GTP-binding protein YqeH SAK_1677 1662970 - 1662437 - | HAD superfamily hydrolase TERM 2149 1663050 - 1663037 - R 100 -6.7 -5.68438 | opp_overlap 1663037 CGAGTAAAGAAAAAA GGTCT TTAA AGACC TTTAAATTAGGGTTT SAK_1678 1663968 - 1663081 - | hypothetical protein TERM 2150 1663667 - 1663647 - G 76 -7.7 -4.08706 | overlap 1663650 TGTTTAGGATACAAA CAATACTCA AAA TAAGTATTG GTGCCATATATTGCA TERM 2151 1664097 - 1664130 + r 91 -9.7 -4.43392 | opp_overlap 1664100 1664106 1664107, overlap 1664095 TCGTGCTAAATTAGC GAATAAAAACCAGCC AAAA GGCTGATTTCTATTC TTCTTTTAATTTTGC TERM 2152 1664127 - 1664100 - R 81 -10 -3.1634 | opp_overlap 1664097 1664095, overlap 1664106 1664107 TGCTAAATTAGCGAA TAAAAACCAGCC AAAA GGCTGATTTCTA TTCTTCTTTTAATTT TERM 2153 1664121 - 1664106 - R 85 -6.8 -5.11063 | opp_overlap 1664097 1664095, overlap 1664100 1664107 ATTAGCGAATAAAAA CCAGCC AAAA GGCTGA TTTCTATTCTTCTTT TERM 2154 1664120 - 1664107 - R 75 -8.1 -3.65554 | opp_overlap 1664097 1664095, overlap 1664106 1664100 TTAGCGAATAAAAAC CAGCC AAAA GGCTG ATTTCTATTCTTCTT gatB 1665567 - 1664125 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 2155 1665547 - 1665533 - G 71 -8.6 -3.1585 | opp_overlap 1665530, overlap 1665531 GTATTTAATTCAACA TGGACT TCA AGTCCA ATGACTGTTTCAAAA gatA 1667033 - 1665567 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 1667335 - 1667033 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 2156 1667433 - 1667471 + r 100 -11.2 -4.68132 | opp_overlap 1667436 1667440, overlap 1667435 1667436 1667440 TATCCCAGCTTTTCA TAATAAACGCTTCTTACC TAT GATAAGAAGCGTTTACTG TTTATTTATCTATTG TERM 2157 1667435 - 1667469 + r 95 -11.6 -3.92887 | opp_overlap 1667436 1667440, overlap 1667433 1667436 1667440 TCCCAGCTTTTCATA ATAAACGCTTCTTACC TAT GATAAGAAGCGTTTAC TGTTTATTTATCTAT TERM 2158 1667436 - 1667468 + r 100 -15.1 -2.94105 | opp_overlap 1667436 1667440, overlap 1667435 1667433 1667440 CCCAGCTTTTCATAA TAAACGCTTCTTACC TAT GATAAGAAGCGTTTA CTGTTTATTTATCTA TERM 2159 1667468 - 1667436 - R 100 -17.3 -3.29511 | opp_overlap 1667436 1667435 1667433 1667440, overlap 1667440 CCCAGCTTTTCATAA TAAACGCTTCTTACC TAT GATAAGAAGCGTTTA CTGTTTATTTATCTA TERM 2160 1667464 - 1667440 - R 100 -13.7 -4.30719 | opp_overlap 1667436 1667435 1667433 1667440, overlap 1667436 GCTTTTCATAATAAA CGCTTCTTACC TAT GATAAGAAGCG TTTACTGTTTATTTA TERM 2161 1667440 - 1667464 + r 100 -11.5 -4.10269 | opp_overlap 1667440 1667436, overlap 1667436 1667435 1667433 GCTTTTCATAATAAA CGCTTCTTACC TAT GATAAGAAGCG TTTACTGTTTATTTA ppdK 1670118 - 1667473 - | pyruvate phosphate dikinase SAK_1683 1670961 - 1670131 - | hypothetical protein SAK_1684 1671469 - 1670972 - | CBS domain-containing protein TERM 2162 1671689 - 1671655 - g 77 -10.4 -2.86177 | opp_overlap 1671646 1671654 1671653 1671655 1671657, overlap 1671657 ATATGTTATATTATA TATCTTTTTTTACT GAAATCA AGTAAAAAAAGATA CTATTTTAAAAATAA TERM 2163 1671655 - 1671689 + G 77 -10.4 -2.79004 | opp_overlap 1671655 1671657, overlap 1671646 1671654 1671653 1671657 ATATGTTATATTATA TATCTTTTTTTACT GAAATCA AGTAAAAAAAGATA CTATTTTAAAAATAA TERM 2164 1671687 - 1671657 - g 70 -8.6 -2.97925 | opp_overlap 1671657 1671655 1671654 1671653, overlap 1671655 ATGTTATATTATATA TCTTTTTTTACT GAAATCA AGTAAAAAAAGA TACTATTTTAAAAAT TERM 2165 1671657 - 1671687 + G 70 -8.6 -2.93891 | opp_overlap 1671655 1671657, overlap 1671655 1671654 1671653 ATGTTATATTATATA TCTTTTTTTACT GAAATCA AGTAAAAAAAGA TACTATTTTAAAAAT SAK_1685 1671622 - 1672755 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 2166 1672796 - 1672757 - T 100 -17.6 -3.80841 | opp_overlap 1672760 1672765, overlap 1672758 1672765 ATGATTACGACTAAA CTATAAAAGAGGTTAGAT AAAA ATCTAACCTCTTTTATAA TTCAACTAAAGAATA TERM 2167 1672795 - 1672758 - T 100 -18.9 -2.88023 | opp_overlap 1672760 1672765, overlap 1672757 1672765 TGATTACGACTAAAC TATAAAAGAGGTTAGAT AAAA ATCTAACCTCTTTTATA ATTCAACTAAAGAAT TERM 2168 1672760 - 1672793 + T 100 -17.1 -2.73364 | opp_overlap 1672758 1672757 1672765, overlap 1672765 ATTACGACTAAACTA TAAAAGAGGTTAGAT AAAA ATCTAACCTCTTTTA TAATTCAACTAAAGA TERM 2169 1672788 - 1672765 - T 100 -12.6 -4.63172 | opp_overlap 1672760 1672765, overlap 1672758 1672757 GACTAAACTATAAAA GAGGTTAGAT AAAA ATCTAACCTC TTTTATAATTCAACT TERM 2170 1672765 - 1672788 + T 100 -12.6 -4.54821 | opp_overlap 1672765 1672758 1672757, overlap 1672760 GACTAAACTATAAAA GAGGTTAGAT AAAA ATCTAACCTC TTTTATAATTCAACT SAK_1686 1673350 - 1672802 - | isochorismatase family protein TERM 2171 1673407 - 1673383 - R 95 -9.3 -5.0538 | CTTGATTTCAAAAAA GGAACTGAAAG CTA CTCCCAGTCCC ATGCTATGATTAATT codY 1674202 - 1673417 - | transcriptional repressor CodY TERM 2172 1674341 - 1674359 + r 75 -2.4 -5.59534 | TTCTAGCGCTTGTAT TGGCTT AAAAAGC GAGCCA TTTTTTCTTGTAGTT SAK_1688 1675539 - 1674328 - | aminotransferase AlaT TERM 2173 1674450 - 1674462 + g 77 -2.7 -5.4593 | TAAATCCTCTACCGT GTGTT AGT AATAC TTTTTCTTGTTTTAA TERM 2174 1675254 - 1675273 + g 95 -10.8 -4.43844 | opp_overlap 1675253 1675256 TAACAATGTATATAT CATCCATG TCAA CATGGATG TTTTGTAACTGGTAA SAK_1689 1675806 - 1676258 + | hypothetical protein TERM 2175 1676310 - 1676284 - T 100 -15.4 -4.09685 | opp_overlap 1676284 GCTCACTTTCTAAAA TATCCTGAGTTA TAT TAACTCAGGATA TTTTTATTTTCGATT TERM 2176 1676284 - 1676310 + T 100 -15.4 -5.49568 | opp_overlap 1676284 GCTCACTTTCTAAAA TATCCTGAGTTA TAT TAACTCAGGATA TTTTTATTTTCGATT SAK_1690 1677696 - 1676314 - | Cof-like hydrolase family protein SAK_1691 1677765 - 1678727 + | asparaginase family protein TERM 2177 1678717 - 1678772 + T 100 -18.2 -4.01184 | opp_overlap 1678735, overlap 1678718 1678724 1678735 ATCTAAAAGACTATA TTGAAGGTTGATAAAAAACTCTAGAA ATAT TTCTAGAGTTTTTTATTAATTTTCAG TTTGTAATACTCTCT TERM 2178 1678718 - 1678771 + T 100 -19.5 -2.99987 | opp_overlap 1678735, overlap 1678717 1678724 1678735 TCTAAAAGACTATAT TGAAGGTTGATAAAAAACTCTAGAA ATAT TTCTAGAGTTTTTTATTAATTTTCA GTTTGTAATACTCTC TERM 2179 1678724 - 1678765 + T 100 -17.1 -4.40173 | opp_overlap 1678735, overlap 1678718 1678717 1678735 AGACTATATTGAAGG TTGATAAAAAACTCTAGAA ATAT TTCTAGAGTTTTTTATTAA TTTTCAGTTTGTAAT TERM 2180 1678735 - 1678754 + T 100 -9.4 -5.61689 | opp_overlap 1678735, overlap 1678724 1678718 1678717 AAGGTTGATAAAAAA CTCTAGAA ATAT TTCTAGAG TTTTTTATTAATTTT TERM 2181 1678754 - 1678735 - T 100 -9.4 -5.25803 | opp_overlap 1678735 1678724 1678718 1678717 AAGGTTGATAAAAAA CTCTAGAA ATAT TTCTAGAG TTTTTTATTAATTTT aroE 1679640 - 1678762 - | shikimate 5-dehydrogenase TERM 2182 1679728 - 1679706 - R 80 -6.4 -4.88407 | opp_overlap 1679706 TGACTCAATTAAAAA GAGAGTAT GTAATTT ATACTCTC TCCCTTAGTTTAAGG SAK_1693 1680652 - 1679738 - | aldo/keto reductase family oxidoreductase TERM 2183 1680750 - 1680770 + r 75 -2.5 -5.67967 | opp_overlap 1680750, overlap 1680752 TTACAAATGCAAAAA GCTGAGTAA ATT TAACTCAAC TTTTTTTCTGATACT TERM 2184 1680770 - 1680750 - R 72 -4.7 -4.84529 | opp_overlap 1680750 1680752 TTACAAATGCAAAAA GCTGAGTAA ATT TAACTCAAC TTTTTTTCTGATACT recG 1682958 - 1680943 - | ATP-dependent DNA helicase RecG TERM 2185 1683023 - 1683007 - R 86 -7.2 -4.81734 | opp_overlap 1683007 AAAGATCACCAAAAA GGCGCC TCAAG AGCGCC TTTATTATGTCTAAT TERM 2186 1683007 - 1683023 + r 74 -6.5 -4.43576 | opp_overlap 1683007 AAAGATCACCAAAAA GGCGC CTCAAGA GCGCC TTTATTATGTCTAAT SAK_1695 1684576 - 1683038 - | immunogenic secreted protein, putative alr 1685769 - 1684669 - | alanine racemase TERM 2187 1684748 - 1684769 + g 77 -10.3 -2.77344 | overlap 1684747 TTTTGAGCGACGTCC GTAGTTGTA ATGT TACAACTAC CTTGTTGACCAATCA acpS 1686125 - 1685766 - | 4'-phosphopantetheinyl transferase SAK_1698 1687157 - 1686150 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2188 1687237 - 1687262 + r 100 -12.1 -5.46706 | opp_overlap 1687237 1687242, overlap 1687242 TTAGACAAGTAATGA TAAAACAGTCT TCTC AGACTGTTTTA TTTTTATTTTAAAAT TERM 2189 1687262 - 1687237 - R 88 -12.1 -2.88731 | opp_overlap 1687237 1687242, overlap 1687242 TTAGACAAGTAATGA TAAAACAGTCT TCTC AGACTGTTTTA TTTTTATTTTAAAAT TERM 2190 1687257 - 1687242 - R 82 -7.6 -4.58213 | opp_overlap 1687237 1687242, overlap 1687237 CAAGTAATGATAAAA CAGTCT TCTC AGACTG TTTTATTTTTATTTT TERM 2191 1687242 - 1687257 + r 100 -7.6 -5.51078 | opp_overlap 1687242 1687237, overlap 1687237 CAAGTAATGATAAAA CAGTCT TCTC AGACTG TTTTATTTTTATTTT secA 1689811 - 1687283 - | preprotein translocase subunit SecA TERM 2192 1689070 - 1689081 + g 76 -5.8 -4.57837 | opp_overlap 1689069 CAATGATATAATCAT CGCT ATTA AGCG TTTTTACAAACATGT TERM 2193 1689741 - 1689757 + g 80 -2.3 -5.63103 | TAAGAGTCAACTTTC TTAGCTA TTT TATCTAA TTTTTTTAATTCACC TERM 2194 1689894 - 1689922 + r 73 -4.6 -5.05782 | opp_overlap 1689900, overlap 1689898 1689900 CGTTTTAATCGAGAT TAAAAAGAGTGG TATCC CCACTCTCATTA TTTTTTAACATGACT TERM 2195 1689900 - 1689916 + r 71 -8 -3.23795 | opp_overlap 1689900, overlap 1689898 1689894 AATCGAGATTAAAAA GAGTGG TATCC CCACTC TCATTATTTTTTAAC TERM 2196 1689916 - 1689900 - R 90 -8 -4.82154 | opp_overlap 1689900 1689898 1689894 AATCGAGATTAAAAA GAGTGG TATCC CCACTC TCATTATTTTTTAAC manA 1690867 - 1689920 - | mannose-6-phosphate isomerase, class I scrK 1691866 - 1690985 - | fructokinase TERM 2197 1691929 - 1691900 - R 100 -14.5 -3.38046 | opp_overlap 1691904, overlap 1691886 1691904 TCTCTATCTCAAAGA CAAAGGTTGGGAT AATT ATCCCAACCTTTA ATCCTCACTTAACAT TERM 2198 1691904 - 1691925 + r 100 -13.1 -3.80461 | opp_overlap 1691900 1691904 TATCTCAAAGACAAA GGTTGGGAT AATT ATCCCAACC TTTAATCCTCACTTA TERM 2199 1691925 - 1691904 - R 100 -13.1 -4.33928 | opp_overlap 1691904, overlap 1691900 TATCTCAAAGACAAA GGTTGGGAT AATT ATCCCAACC TTTAATCCTCACTTA SAK_1702 1693853 - 1691934 - | PTS system, sucrose-specific IIABC component TERM 2200 1692988 - 1692974 - G 75 -8.6 -3.56937 | CAAGAGGTAAATTAA GGACAA ATT TTGTCC CTGCTAAAACATAGT TERM 2201 1693876 - 1693888 + H 75 -4.9 -4.97158 | TCTCCTTTGATATTT TGAAA GCG TTTCA TTTTATTTACTCTAA TERM 2202 1693946 - 1693927 - H 73 -8 -3.5241 | overlap 1693925 CACGTCTCATAAATA TATGTCAA GCGT TTGACATA AAATAATATTTTTCG scrB 1694038 - 1695477 + | sucrose-6-phosphate hydrolase scrR 1695479 - 1696441 + | sucrose operon repressor ScrR TERM 2203 1696487 - 1696541 + T 100 -18.5 -3.43564 | gap 1, opp_overlap 1696491 1696503, overlap 1696490 1696491 1696503 CCGATAGTTATTTTT CAAA-GCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTCATTTG TTATAAATTGACTTA TERM 2204 1696490 - 1696537 + T 100 -16 -4.35604 | opp_overlap 1696491 1696503, overlap 1696487 1696491 1696503 ATAGTTATTTTTCAA AGCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTCA TTTGTTATAAATTGA TERM 2205 1696536 - 1696491 - T 100 -19.5 -3.55761 | opp_overlap 1696490 1696487 1696491 1696503, overlap 1696503 TAGTTATTTTTCAAA GCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTC ATTTGTTATAAATTG TERM 2206 1696491 - 1696536 + T 100 -19.5 -3.20639 | opp_overlap 1696491 1696503, overlap 1696490 1696487 1696503 TAGTTATTTTTCAAA GCAAATTAAAAATGTGGAAGA AGAT TCTTCCACATTTTTAATTTTC ATTTGTTATAAATTG TERM 2207 1696503 - 1696524 + T 100 -11.7 -5.13016 | opp_overlap 1696491 1696503, overlap 1696491 1696490 1696487 AAAGCAAATTAAAAA TGTGGAAGA AGAT TCTTCCACA TTTTTAATTTTCATT TERM 2208 1696524 - 1696503 - T 100 -11.7 -5.05577 | opp_overlap 1696503 1696491 1696490 1696487, overlap 1696491 AAAGCAAATTAAAAA TGTGGAAGA AGAT TCTTCCACA TTTTTAATTTTCATT nusB 1696962 - 1696528 - | transcription antitermination protein NusB SAK_1706 1697344 - 1696955 - | hypothetical protein efp 1697993 - 1697433 - | elongation factor P SAK_1708 1699220 - 1698921 - | hypothetical protein SAK_1709 1699868 - 1699638 - | hypothetical protein SAK_1710 1700051 - 1699881 - | hypothetical protein SAK_1711 1700629 - 1700504 - | hypothetical protein SAK_1712 1700804 - 1700640 - | hypothetical protein TERM 2209 1700861 - 1700914 + r 100 -13 -4.0371 | gap 1, opp_overlap 1700862 1700878, overlap 1700862 TTCCCAGCAGTACTA ATTTTAGATGTTGATAATAG-ATGG ATCAG CTATTCTATTATCAACATCTAAAAC TTTCTGTGAAAAATC TERM 2210 1700862 - 1700913 + r 100 -16.5 -3.01905 | gap 1, opp_overlap 1700862 1700878, overlap 1700861 TCCCAGCAGTACTAA TTTTAGATGTTGATAATAG-ATGG ATCAG CTATTCTATTATCAACATCTAAAA CTTTCTGTGAAAAAT TERM 2211 1700913 - 1700862 - R 100 -14.3 -3.23216 | gap 1, opp_overlap 1700862 1700861, overlap 1700878 TCCCAGCAGTACTAA TTTTAGATGTTGATAATAG-ATGG ATCAG CTATTCTATTATCAACATCTAAAA CTTTCTGTGAAAAAT SAK_1713 1701558 - 1701106 - | cytidine/deoxycytidylate deaminase family protein TERM 2212 1702726 - 1702709 - R 74 -5.6 -4.79352 | opp_overlap 1702704 1702709, overlap 1702704 TTAGCTATAAGAAAA GCAACT CATTTC AGTTGC TTTTACTTTACTATT TERM 2213 1702709 - 1702726 + r 71 -5.6 -4.61284 | opp_overlap 1702709 1702704, overlap 1702704 TTAGCTATAAGAAAA GCAACT CATTTC AGTTGC TTTTACTTTACTATT SAK_1715 1703453 - 1702737 - | hypothetical protein SAK_1716 1704954 - 1703455 - | drug:H+ antiporter-2 (DHA2) family protein TERM 2214 1704434 - 1704405 - G 71 -5 -4.58644 | AAGGAAGAAGGAAAA TTGCACGCCATG TTAAAT CATGCCCTGCAA AATGAAATTCTTGTT TERM 2215 1704924 - 1704936 + g 78 -6.3 -4.74012 | GATTATATGGTTTGC CATGA ATA TCATG TTTTGCTTTTGTAGT TERM 2216 1705018 - 1705057 + r 78 -6.8 -4.3739 | opp_overlap 1705022, overlap 1705023 AACAAATAGGTCTTA TAAGGTTATTTTTTGATT TTTT AATCAAGAAATAATATTA TTTTCTGAAAAAATC TERM 2217 1705023 - 1705052 + r 80 -8.9 -3.75581 | opp_overlap 1705022, overlap 1705018 ATAGGTCTTATAAGG TTATTTTTTGATT TTTT AATCAAGAAATAA TATTATTTTCTGAAA TERM 2218 1705282 - 1705257 - R 100 -12.7 -4.85599 | GTTAGCTTACAAAAA GGAACTGAGTA ATAT TACTCAGCTCC CAATAAACTATCTTG uvrA 1708118 - 1705290 - | excinuclease ABC subunit A TERM 2219 1708242 - 1708218 - R 76 -3.7 -5.37043 | gap 1, opp_overlap 1708218 ATTTCATAGAAAAAA GAG-ATGAAC TAATAC GTTCATACTC TTTGTTATTATCTTC SAK_1718 1708921 - 1708250 - | hypothetical protein TERM 2220 1708665 - 1708679 + g 81 -2.8 -5.61596 | opp_overlap 1708667, overlap 1708667 GTATCTAACCACATC AACCAA GGA TTGGTA TTTTTTTGTACAGAT TERM 2221 1708667 - 1708677 + g 70 -5.4 -4.45201 | opp_overlap 1708667, overlap 1708665 ATCTAACCACATCAA CCAA GGA TTGG TATTTTTTTGTACAG SAK_1719 1709890 - 1708946 - | CorA metal ion transporter (MIT) family protein TERM 2222 1710038 - 1710052 + r 74 -5.7 -4.73094 | opp_overlap 1710038, overlap 1710033 AAAAGAATAAAAAAA TAGCC GCTAG GGCTA TTTTATATTAATCTT TERM 2223 1710052 - 1710038 - R 100 -5.7 -6.04419 | opp_overlap 1710038 1710033 AAAAGAATAAAAAAA TAGCC GCTAG GGCTA TTTTATATTAATCTT rpsR 1710299 - 1710060 - | 30S ribosomal protein S18 ssb1 1710835 - 1710344 - | single-strand DNA-binding protein rpsF 1711134 - 1710847 - | 30S ribosomal protein S6 TERM 2224 1711181 - 1711163 - H 80 -10.4 -2.70932 | opp_overlap 1711156 CTTTTGGTCTAATGA CTCATGAA TTT TTCATGAG TAAGTGAGGTTATGC TERM 2225 1711270 - 1711284 + H 71 -2.2 -5.47159 | TTCCCTGATATCATT TAAAGA CAT TTTTTA TTTTTCTTTATTGAA TERM 2226 1711406 - 1711387 - H 100 -10 -5.77571 | ATTAAAAAATAAAAA GGCGAGGT TTAC ACCTCACC TTCAACATATTATTT TERM 2227 1711652 - 1711668 + H 85 -8 -4.46976 | opp_overlap 1711651 AAATTACTAACACAT CTAGGG GTATA CCCTAG TTTATATTTGTTCAT TERM 2228 1711986 - 1712001 + H 74 -7.6 -3.8211 | TACCAATCTTTCTTT TGGAGA CTAG TCTCCA TTCTTATACCTAGAG TERM 2229 1712122 - 1712110 - H 79 -2.7 -5.83226 | overlap 1712102 AAGTCAAGAAAAAAA TATTG ATG CAACA TTTTTCTTCATCATT mutY 1712228 - 1713352 + | A/G-specific adenine glycosylase TERM 2230 1713359 - 1713377 + F 80 -5.3 -5.29846 | opp_overlap 1713359 AATGCTTAATCACAA GTGAACT ATGAC GGTTCAC TTTTTGTTTACAATT SAK_1724 1713529 - 1714122 + | DNA-binding protein TERM 2231 1714166 - 1714130 - T 100 -14.7 -3.56161 | opp_overlap 1714130 1714135 1714139, overlap 1714135 1714139 TAAGTTAGTAGATAA TAAAATAAAGCTCAGCG TGA CACTGGGCTTTATTTTA TTTAACTCAATTCAG TERM 2232 1714130 - 1714166 + T 100 -14.7 -3.68619 | opp_overlap 1714130 1714135 1714139, overlap 1714135 1714139 TAAGTTAGTAGATAA TAAAATAAAGCTCAGCG TGA CACTGGGCTTTATTTTA TTTAACTCAATTCAG TERM 2233 1714161 - 1714135 - T 100 -10.2 -4.85918 | opp_overlap 1714130 1714135 1714139, overlap 1714130 1714139 TAGTAGATAATAAAA TAAAGCTCAGCG TGA CACTGGGCTTTA TTTTATTTAACTCAA TERM 2234 1714135 - 1714161 + T 100 -10.2 -4.90778 | opp_overlap 1714135 1714130 1714139, overlap 1714130 1714139 TAGTAGATAATAAAA TAAAGCTCAGCG TGA CACTGGGCTTTA TTTTATTTAACTCAA TERM 2235 1714157 - 1714139 - T 85 -6.6 -4.94168 | opp_overlap 1714135 1714130 1714139, overlap 1714135 1714130 AGATAATAAAATAAA GCTCAGCG TGA CACTGGGC TTTATTTTATTTAAC TERM 2236 1714139 - 1714157 + T 85 -6.6 -4.96996 | opp_overlap 1714139 1714135 1714130, overlap 1714135 1714130 AGATAATAAAATAAA GCTCAGCG TGA CACTGGGC TTTATTTTATTTAAC trx 1714482 - 1714168 - | thioredoxin SAK_1727 1717406 - 1715067 - | MutS2 family protein TERM 2237 1717474 - 1717453 - R 80 -7.3 -4.6902 | opp_overlap 1717453, overlap 1717441 TGACAACGTTAAAAA GGTTGGAAC TCTT ACTCCAACC TTACTAAACATTATA SAK_1728 1718033 - 1717491 - | hypothetical protein SAK_1729 1718347 - 1718036 - | hypothetical protein rnhC 1718458 - 1719351 + | ribonuclease HIII lepB 1719367 - 1719960 + | signal peptidase I TERM 2238 1721354 - 1721371 + G 71 -7.1 -3.86634 | opp_overlap 1721354 1721353 TAGTGACTATCAAAG TCTAGAT GACT ATCTAGA TTGTTCCTTAATTAT SAK_1732 1720089 - 1722509 + | RecD/TraA family helicase SAK_1733 1722624 - 1723106 + | hypothetical protein TERM 2239 1723136 - 1723110 - T 85 -11 -3.27915 | opp_overlap 1723115, overlap 1723115 GAGACTAACTAAAAG TAAAAGCACTAG AAT CTAGTGCTTTTT TCTTTTCAAAGAGAG TERM 2240 1723115 - 1723131 + T 100 -10.9 -5.79595 | opp_overlap 1723110 1723115 TAACTAAAAGTAAAA GCACTAG AAT CTAGTGC TTTTTTCTTTTCAAA TERM 2241 1723131 - 1723115 - T 100 -10.9 -4.72729 | opp_overlap 1723115, overlap 1723110 TAACTAAAAGTAAAA GCACTAG AAT CTAGTGC TTTTTTCTTTTCAAA dinB 1724271 - 1723177 - | DNA polymerase IV TERM 2242 1723758 - 1723782 + g 70 -6.5 -4.0896 | TGAGGGTAAGTCCTT TTGGTTTCTCA AAG TCAGAAGCCAA TTTTGCCAAAAATTT TERM 2243 1724544 - 1724534 - g 86 -5.4 -5.28942 | opp_overlap 1724534, overlap 1724541 GATTGGAAAGAAAAA GCAA GTA TTGC TCGCTTCGTTCAAGC pflB 1724456 - 1726768 + | formate acetyltransferase 1 TERM 2244 1726784 - 1726808 + F 100 -14.5 -4.69028 | opp_overlap 1726784 TTTGTATTCGATGAA GTAGGTTTGAT TAT ATCAAACCTAC TTTTATCTATATTAT TERM 2245 1726808 - 1726784 - f 100 -14.5 -3.16564 | opp_overlap 1726784 TTTGTATTCGATGAA GTAGGTTTGAT TAT ATCAAACCTAC TTTTATCTATATTAT SAK_1736 1726869 - 1727243 + | FMN-binding protein TERM 2246 1727287 - 1727235 - T 100 -17.6 -3.09234 | gap 1, opp_overlap 1727248, overlap 1727248 ATAAATGTTATCCAA CTTT-TATAAAAAACTTCTCCTAGA AAAT TCTAGGAGAAGTTTTTTATTCAAAG TACGATGTTATCGCC TERM 2247 1727273 - 1727248 - T 100 -14.9 -5.25803 | opp_overlap 1727248, overlap 1727235 AACTTTTATAAAAAA CTTCTCCTAGA AAAT TCTAGGAGAAG TTTTTTATTCAAAGT TERM 2248 1727248 - 1727273 + T 100 -14.9 -5.45652 | opp_overlap 1727235 1727248 AACTTTTATAAAAAA CTTCTCCTAGA AAAT TCTAGGAGAAG TTTTTTATTCAAAGT SAK_1737 1728207 - 1727278 - | hypothetical protein SAK_1738 1728959 - 1728204 - | hypothetical protein TERM 2249 1729423 - 1729433 + G 78 -6.8 -4.6635 | opp_overlap 1729422 ACACTAATAACAATG GCTG GTG CAGC TTTTATTGGGGCTTT SAK_1739 1729021 - 1729980 + | hypothetical protein TERM 2250 1729987 - 1730007 + T 91 -7.6 -5.19879 | opp_overlap 1729987 CATCATTAAACGAAA TCAGCTAG CAAGA CTGGCTGA TTTTTATATTTAAAA TERM 2251 1730054 - 1730023 - T 90 -9.6 -4.2349 | opp_overlap 1730031 1730049, overlap 1730031 TTTTTATATTTAAAA CAAAAAAAGACCGG TAAA CCGATCTTTCTTTA ACTATTAAAGATATA TERM 2252 1730046 - 1730031 - T 100 -6.8 -6.09196 | opp_overlap 1730031, overlap 1730023 TTTAAAACAAAAAAA GACCGG TAAA CCGATC TTTCTTTAACTATTA SAK_1740 1730886 - 1730059 - | glycerol facilitator/aquaporin TERM 2253 1731024 - 1731073 + r 100 -14.9 -2.97721 | gap 1, opp_overlap 1731003 1731032, overlap 1731027 1731032 ACCAAATATATTTGA TAAA-AAAATAGAGTACTAGGT TCGGACT ACCTAGTACTCTATTTTATTTA GTTTATAAGGTTTTC TERM 2254 1731027 - 1731069 + r 100 -13.8 -4.14397 | opp_overlap 1731003 1731032, overlap 1731024 1731032 AAATATATTTGATAA AAAAATAGAGTACTAGGT TCGGACT ACCTAGTACTCTATTTTA TTTAGTTTATAAGGT TERM 2255 1731064 - 1731032 - R 100 -13.7 -5.626 | opp_overlap 1731027 1731024 1731032 TATTTGATAAAAAAA TAGAGTACTAGGT TCGGACT ACCTAGTACTCTA TTTTATTTAGTTTAT TERM 2256 1731032 - 1731064 + r 100 -13.7 -5.06223 | opp_overlap 1731032, overlap 1731027 1731024 TATTTGATAAAAAAA TAGAGTACTAGGT TCGGACT ACCTAGTACTCTA TTTTATTTAGTTTAT SAK_1741 1731528 - 1731076 - | universal stress family protein SAK_1742 1732748 - 1731546 - | major facilitator family protein SAK_1743 1732904 - 1733563 + | transcriptional regulator, putative TERM 2257 1734396 - 1734410 + G 74 -4.3 -5.02323 | opp_overlap 1734384 ACACATTGACAGTTA TAGTC TCAAT GACTA TTTTCTTTCTCGTGG pepX 1733587 - 1735872 + | x-prolyl-dipeptidyl aminopeptidase TERM 2258 1736190 - 1736172 - g 79 -8.2 -4.1774 | AATAACTATAAATAA TTGGAAGA GTC TCCTCCAA ACTCAACTCGAAGCT SAK_1745 1735876 - 1736235 + | hypothetical protein SAK_1746 1736281 - 1737261 + | polyprenyl synthetase family protein TERM 2259 1737307 - 1737274 - T 90 -4 -6.01369 | gap 1, opp_overlap 1737265 TAAATAATAAAAAAA CATTCCACAA-TGCT AGAAA AGCAGTTAGGGAATG TTTTTTTACTATCAT cydC 1739094 - 1737346 - | ABC transporter, ATP-binding protein CydC cydD 1740805 - 1739087 - | ABC transporter, ATP-binding protein CydD TERM 2260 1740756 - 1740722 - G 86 -10.1 -4.30719 | TTGTCCGATAATAAA GATTGCTTGAAGAAC ATCAA GTCCCGCAAGCAATC CTAACAACTTATGAA cydB 1741824 - 1740805 - | cytochrome d ubiquinol oxidase, subunit II TERM 2261 1741629 - 1741613 - G 75 -7.3 -4.21908 | overlap 1741616 TACCAGTATGGAAAA GAAGCAA ACA TTGCTCC ACCACCGGTAAGAAG cydA 1743252 - 1741825 - | cytochrome d ubiquinol oxidase, subunit II SAK_1751 1744563 - 1743355 - | pyridine nucleotide-disulphide oxidoreductase family protein SAK_1752 1745475 - 1744576 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 2262 1745082 - 1745072 - G 70 -6.8 -4.11404 | GGCAGACTAGATAAA GGTC TTG GACC AAAGGAATATAAAAC TERM 2263 1745829 - 1745798 - R 100 -17.6 -5.59357 | opp_overlap 1745794 1745793 AGCATACTAAAAAAA CTAGTGTTACACTT TGAA AAGTGTAACACTAG CTCCAATTTGTTTTA SAK_1753 1746807 - 1745884 - | hypothetical protein hsdM 1747226 - 1748806 + | type I restriction-modification system, M subunit TERM 2264 1749256 - 1749287 + T 81 -4.6 -5.42164 | opp_overlap 1749259, overlap 1749259 TCTTCTATACACAAA AAATCGTATTAC AAAATAAA GTAATACGATTC TTTTTATTGTTTATA TERM 2265 1749284 - 1749259 - T 88 -6.3 -5.4251 | opp_overlap 1749256 1749259 TCTATACACAAAAAA TCGTATTAC AAAATAAA GTAATACGA TTCTTTTTATTGTTT TERM 2266 1749259 - 1749284 + T 80 -6.3 -4.74161 | opp_overlap 1749259, overlap 1749256 TCTATACACAAAAAA TCGTATTAC AAAATAAA GTAATACGA TTCTTTTTATTGTTT SAK_1755 1751202 - 1749430 - | hypothetical protein TERM 2267 1749618 - 1749635 + g 76 -6.3 -4.62475 | CTTTTTCTTTATCAT TCAGAGG ACGT CTTCTGA TTTTAATTTGTAAAT TERM 2268 1750836 - 1750846 + g 81 -4 -5.4505 | ATTTTCTTTTACTTC TCTT TAT AAGA TTTTTTATTGAAAGA TERM 2269 1751302 - 1751326 + r 80 -5.8 -5.10004 | opp_overlap 1751303, overlap 1751303 TTTAAACAGAAAAAA ACAAGATGAT ATTGA ATCATCTTGC TTTTTGATTATTTTT TERM 2270 1751303 - 1751325 + r 80 -9.3 -3.62342 | opp_overlap 1751303, overlap 1751302 TTAAACAGAAAAAAA CAAGATGAT ATTGA ATCATCTTG CTTTTTGATTATTTT TERM 2271 1751325 - 1751303 - R 100 -9.3 -5.88197 | opp_overlap 1751303 1751302 TTAAACAGAAAAAAA CAAGATGAT ATTGA ATCATCTTG CTTTTTGATTATTTT tkt 1753325 - 1751340 - | transketolase TERM 2272 1753378 - 1753352 - R 84 -11 -3.14132 | opp_overlap 1753354 1753360, overlap 1753354 1753360 TTCTGTTTTTAGTAA TATAAAAAGGGG ATT CCCCTTTTTATT TTTTAAATGAAGCCC TERM 2273 1753376 - 1753354 - R 100 -13.6 -3.13403 | opp_overlap 1753354 1753360, overlap 1753352 1753360 CTGTTTTTAGTAATA TAAAAAGGGG ATT CCCCTTTTTA TTTTTTAAATGAAGC TERM 2274 1753354 - 1753376 + r 100 -13.6 -5.08824 | opp_overlap 1753354 1753352 1753360, overlap 1753360 CTGTTTTTAGTAATA TAAAAAGGGG ATT CCCCTTTTTA TTTTTTAAATGAAGC TERM 2275 1753360 - 1753370 + r 100 -8.2 -5.75538 | opp_overlap 1753360 1753354 1753352, overlap 1753354 TTAGTAATATAAAAA GGGG ATT CCCC TTTTTATTTTTTAAA TERM 2276 1753370 - 1753360 - R 91 -8.2 -5.1244 | opp_overlap 1753354 1753360, overlap 1753354 1753352 TTAGTAATATAAAAA GGGG ATT CCCC TTTTTATTTTTTAAA SAK_1757 1754018 - 1753374 - | putative translaldolase TERM 2277 1753920 - 1753906 - G 70 -6.4 -4.10007 | ATAACCGTTTCAAAA TCACGA CCT TCGCGA GAGATAATCGTTGGA SAK_1758 1754725 - 1754036 - | allulose-6-phosphate 3-epimerase SAK_1759 1755840 - 1754737 - | PTS system, fructose-specific, IIC component TERM 2278 1755801 - 1755789 - G 76 -6.3 -4.62669 | GAATTAAATAAGAAA TTGCT GTT AGCAA GTGACCTTTAAAATT SAK_1760 1756302 - 1755853 - | PTS system, fructose-specific, IIA component SAK_1761 1756627 - 1756316 - | PTS system, fructose-specific, IIB component SAK_1762 1758530 - 1756641 - | PRD domain/PTS system IIA domain-containing protein TERM 2279 1758610 - 1758647 + r 100 -14.5 -3.76125 | opp_overlap 1758610 1758613 1758620, overlap 1758613 1758619 ATATCATTTAGTAAA CAACATAAAATTGCAAA TAAG TTTGCAACTTTATGTTG TTTAAATTAAAATAC TERM 2280 1758647 - 1758610 - R 100 -16.7 -3.77464 | opp_overlap 1758610 1758613 1758619, overlap 1758613 1758620 ATATCATTTAGTAAA CAACATAAAATTGCAAA TAAG TTTGCAACTTTATGTTG TTTAAATTAAAATAC TERM 2281 1758613 - 1758644 + r 91 -10.4 -4.0098 | opp_overlap 1758610 1758613 1758620, overlap 1758610 1758619 TCATTTAGTAAACAA CATAAAATTGCAAA TAAG TTTGCAACTTTATG TTGTTTAAATTAAAA TERM 2282 1758644 - 1758613 - R 100 -12.6 -4.015 | opp_overlap 1758613 1758610 1758619, overlap 1758610 1758620 TCATTTAGTAAACAA CATAAAATTGCAAA TAAG TTTGCAACTTTATG TTGTTTAAATTAAAA TERM 2283 1758637 - 1758620 - R 86 -7.1 -4.84673 | opp_overlap 1758619 1758613 1758610, overlap 1758613 1758610 GTAAACAACATAAAA TTGCAAA TAAG TTTGCAA CTTTATGTTGTTTAA TERM 2284 1758700 - 1758660 - R 100 -11.5 -4.54727 | opp_overlap 1758670 1758675, overlap 1758670 TTGTTTAAATTAAAA TACAAAAAAATGAAAGTGT ATG ACACTTTCATTTCATTATA GCACAGAAAATATTT TERM 2285 1758670 - 1758690 + r 100 -11.3 -3.9941 | opp_overlap 1758660 1758670, overlap 1758675 TAAAATACAAAAAAA TGAAAGTGT ATG ACACTTTCA TTTCATTATAGCACA TERM 2286 1758690 - 1758670 - R 100 -11.3 -5.9362 | opp_overlap 1758670 1758675, overlap 1758660 TAAAATACAAAAAAA TGAAAGTGT ATG ACACTTTCA TTTCATTATAGCACA TERM 2287 1761470 - 1761493 + r 78 -6.8 -4.34912 | opp_overlap 1761489, overlap 1761471 1761489 TAGCCTTGCCCCCTC CTTGCTCTAA TCTA TTAGAGCAAA TTATTTTAATTGCTT TERM 2288 1761471 - 1761492 + r 83 -10.3 -3.19321 | opp_overlap 1761489, overlap 1761470 1761489 AGCCTTGCCCCCTCC TTGCTCTAA TCTA TTAGAGCAA ATTATTTTAATTGCT TERM 2289 1761693 - 1761718 + r 82 -4.8 -5.49234 | opp_overlap 1761693 TCTACACAATAAAAA TCGGTTTACA GAAAAA TGTAAAACGA TTTTTTATTACCTAT TERM 2290 1761718 - 1761693 - R 79 -4.8 -5.24796 | opp_overlap 1761693 TCTACACAATAAAAA TCGGTTTACA GAAAAA TGTAAAACGA TTTTTTATTACCTAT SAK_1766 1762309 - 1761779 - | hypothetical protein SAK_1767 1763142 - 1762351 - | PhzF family phenazine biosynthesis protein TERM 2291 1763092 - 1763076 - G 70 -8.7 -3.11208 | overlap 1763073 1763079 GTTCATTTAAAACCA CAACCCC CGC AGGGTTG CCACTAAACGCCTTA SAK_1768 1763562 - 1763152 - | acetyltransferase SAK_1769 1764068 - 1763970 - | hypothetical protein TERM 2292 1764575 - 1764554 - g 78 -5.8 -4.76213 | ACAAATGGAACAAAA GCAAGCTG ATTTAG CAGCTAGC CAGTTTACTGGAAAA SAK_1770 1764492 - 1764791 + | hypothetical protein TERM 2293 1764833 - 1764796 - f 89 -7.9 -5.0538 | opp_overlap 1764800, overlap 1764800 TGCCATTCTAAAAAA TAAATCACATTTACTGA ATCA CCTGTAAATGTGATTTT TATTTCAAACTTCTT TERM 2294 1764829 - 1764800 - f 95 -8.7 -5.05153 | opp_overlap 1764800, overlap 1764796 ATTCTAAAAAATAAA TCACATTTACTGA ATCA CCTGTAAATGTGA TTTTTATTTCAAACT TERM 2295 1764800 - 1764829 + F 93 -8 -5.27938 | opp_overlap 1764800 1764796 ATTCTAAAAAATAAA TCACATTTACTG AATCAC CTGTAAATGTGA TTTTTATTTCAAACT TERM 2296 1765107 - 1765089 - g 74 -3 -5.41941 | overlap 1765091 TAAACTAAACAAAAA TTTCTCCG TCT CGGAGCTA TCAAAAGACCCTTCT cfa 1764952 - 1766142 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2297 1766185 - 1766210 + T 100 -12.7 -3.73122 | opp_overlap 1766185, overlap 1766188 TATTCTAAATAAAAA GAACTCTCTTG AATT CAAGGGAGTTC TTTAACGTTCTTCTC TERM 2298 1766210 - 1766185 - T 100 -10.5 -5.28942 | opp_overlap 1766185 1766188 TATTCTAAATAAAAA GAACTCTCTTG AATT CAAGGGAGTTC TTTAACGTTCTTCTC TERM 2299 1766188 - 1766207 + T 82 -8.6 -3.98291 | opp_overlap 1766185, overlap 1766185 TCTAAATAAAAAGAA CTCTCTTG AATT CAAGGGAG TTCTTTAACGTTCTT SAK_1772 1766937 - 1766212 - | MerR family transcriptional regulator SAK_1773 1767651 - 1767064 - | DNA polymerase III subunit epsilon TERM 2300 1767662 - 1767692 + r 90 -9.8 -4.27001 | opp_overlap 1767667, overlap 1767667 TTCATTATTTCTCCT AAAAAGCGCAAGGA AAC TCCTTACGCTTTTA TTCTATTTTTTATTG TERM 2301 1767667 - 1767687 + r 100 -9.7 -5.0095 | opp_overlap 1767667, overlap 1767662 TATTTCTCCTAAAAA GCGCAAGGA AAC TCCTTACGC TTTTATTCTATTTTT TERM 2302 1767687 - 1767667 - R 100 -11.9 -4.57073 | opp_overlap 1767667 1767662 TATTTCTCCTAAAAA GCGCAAGGA AAC TCCTTACGC TTTTATTCTATTTTT SAK_1774 1768231 - 1767695 - | hypothetical protein SAK_1775 1768366 - 1769538 + | hypothetical protein SAK_1776 1770363 - 1769581 - | hypothetical protein TERM 2303 1770640 - 1770611 - g 73 -3.5 -5.10933 | opp_overlap 1770613 1770615 TGAGTTAAAAGAAAA GGGTGATTACGAA GCAC TTCGTAAACTTCC TAAAGATTCTAACCC rpsN 1770522 - 1770791 + | 30S ribosomal protein S14 TERM 2304 1771024 - 1771047 + T 93 -6.7 -5.34365 | opp_overlap 1771024 ATTTATTTTCAAAAA GCCCGGTAT GCCAAG ATACCGAGC TTTTTATTATTATAA TERM 2305 1771047 - 1771024 - T 90 -8.9 -4.60041 | opp_overlap 1771024 ATTTATTTTCAAAAA GCCCGGTAT GCCAAG ATACCGAGC TTTTTATTATTATAA TERM 2306 1771120 - 1771101 - T 85 -8 -4.42235 | AATTCCCAAAAACAA GACTATTA TTTG TAATAGTC ACTACTGAATAATAT ltaE 1772177 - 1771152 - | hypothetical protein TERM 2307 1771223 - 1771238 + g 71 -4.8 -4.56775 | opp_overlap 1771225 CTAGACGTATTACAG TATGAT GGTC ATCATA TTTTTCCCAAAAACT TERM 2308 1772286 - 1772265 - R 100 -8.9 -5.82036 | opp_overlap 1772265 ATAACAAATAAAAAA TATCAAAAC AAGC GTTTTGATA TTATGAACACTATAA TERM 2309 1772265 - 1772286 + r 77 -8.9 -3.30771 | opp_overlap 1772265 ATAACAAATAAAAAA TATCAAAAC AAGC GTTTTGATA TTATGAACACTATAA SAK_1779 1773306 - 1772296 - | O-sialoglycoprotein endopeptidase TERM 2310 1772526 - 1772538 + g 78 -6.3 -4.87318 | AAGTTTTCACTGGAT GCTTT AAC AAAGC TTTTTGAGTTTTAGC rimI 1773789 - 1773382 - | ribosomal-protein-alanine acetyltransferase SAK_1781 1774483 - 1773791 - | M22 peptidase SAK_1782 1774662 - 1774892 + | hypothetical protein TERM 2311 1774934 - 1774905 - f 70 -7.3 -3.75295 | opp_overlap 1774899 TAGAAAGGAGTTAAA CATAATAGCTAGA GTAA TCTACCCATTATG ATAAACTTATTATGT SAK_1783 1774946 - 1776625 + | metallo-beta-lactamase family protein TERM 2312 1776660 - 1776627 - T 100 -12.7 -4.55295 | opp_overlap 1776632, overlap 1776632 CCCCTGATAAATAAA CAAAAGAACGGAAAA TACC TTTTCCGTTCTTTTT AATTGCCTATATTAG TERM 2313 1776655 - 1776632 - T 100 -12.6 -5.22481 | opp_overlap 1776632, overlap 1776627 GATAAATAAACAAAA GAACGGAAAA TACC TTTTCCGTTC TTTTTAATTGCCTAT TERM 2314 1776632 - 1776655 + T 100 -12.6 -4.89009 | opp_overlap 1776632 1776627 GATAAATAAACAAAA GAACGGAAAA TACC TTTTCCGTTC TTTTTAATTGCCTAT SAK_1784 1777296 - 1776787 - | CHAP domain-containing protein TERM 2315 1777425 - 1777389 - R 100 -15.5 -5.66684 | opp_overlap 1777389 TAATTTACAAAAAAA CTAGTTTTAGACTTTAC AAA ATAAAGCCTAAAACTAG TTATAAACATTCTTA TERM 2316 1777389 - 1777425 + r 90 -12.6 -3.34947 | opp_overlap 1777389 TAATTTACAAAAAAA CTAGTTTTAGACTTTA CAAAA TAAAGCCTAAAACTAG TTATAAACATTCTTA glnA 1778790 - 1777444 - | glutamine synthetase, type I glnR 1779195 - 1778824 - | transcriptional regulator GlnR SAK_1787 1779814 - 1779275 - | hypothetical protein TERM 2317 1779768 - 1779796 + g 79 -3.3 -5.51165 | opp_overlap 1779774, overlap 1779772 CCCAATTTAAACTTT TTAATATCAAATT TGT AATTAGATAATAA TTTTTTTAACGTTTT TERM 2318 1780035 - 1780052 + r 79 -9.9 -2.91288 | opp_overlap 1780035, overlap 1780034 1780037 TATCAACTAAAAAAA GACATGC ATCA GCATGTC CTTTAATATAAATTA TERM 2319 1780052 - 1780035 - R 100 -9.9 -5.65513 | opp_overlap 1780035 1780034 1780037 TATCAACTAAAAAAA GACATGC ATCA GCATGTC CTTTAATATAAATTA pgk 1781273 - 1780077 - | phosphoglycerate kinase SAK_1789 1782277 - 1781408 - | 5'-nucleotidase TERM 2320 1782467 - 1782442 - R 100 -13.5 -4.87665 | opp_overlap 1782447, overlap 1782447 TTTTATTTATAAAAA TAAAAGAGGGA TAAA TCCCTCTTTTA CATCATATTAATTAA TERM 2321 1782447 - 1782462 + r 88 -9 -4.23723 | opp_overlap 1782442 1782447 TTTATAAAAATAAAA GAGGGA TAAA TCCCTC TTTTACATCATATTA TERM 2322 1782462 - 1782447 - R 100 -9 -5.35224 | opp_overlap 1782447, overlap 1782442 TTTATAAAAATAAAA GAGGGA TAAA TCCCTC TTTTACATCATATTA gap 1783496 - 1782486 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2323 1783680 - 1783663 - R 100 -6.3 -6.20267 | opp_overlap 1783663 1783665 TCAAAAAGAAAAAAA GATACTC TTTC GAGTACC TTTTCATAAGTTTTC fusA 1785779 - 1783701 - | elongation factor G TERM 2324 1785859 - 1785839 - R 100 -9.7 -5.28778 | opp_overlap 1785839 ACTATTTATAAAAAA CGGATAGGC AGG ACCTACCCG TTCTAATTGCTAACA rpsG 1786404 - 1785934 - | 30S ribosomal protein S7 rpsL 1786839 - 1786426 - | 30S ribosomal protein S12 TERM 2325 1787056 - 1787033 - R 89 -7.5 -4.93365 | opp_overlap 1787033 1787036 1787044 TTTTACAAGCAAAAA GAATCAAGG ATGTCA CCTTGACTC TTTAATCAAATATAT purR 1787870 - 1787058 - | purine operon repressor SAK_1795 1788908 - 1787967 - | HD domain-containing protein SAK_1796 1790172 - 1788898 - | RmuC domain-containing protein TERM 2326 1789765 - 1789775 + g 76 -3.2 -5.35222 | AGAAGTTTGCAAACG CGTT TGT AGCG TTTTTTCTAGCTTTT SAK_1797 1790806 - 1790174 - | hypothetical protein TERM 2327 1790725 - 1790694 - G 87 -11.8 -3.57263 | overlap 1790698 ACTGCCATGTCCAAA GAAAGCCCATTTTT TAAT AAAAATAGGCTTCC ACGGTCAATTCCGAC TERM 2328 1790721 - 1790698 - G 90 -9 -4.42806 | overlap 1790694 CCATGTCCAAAGAAA GCCCATTTTT TAAT AAAAATAGGC TTCCACGGTCAATTC rpe 1791461 - 1790799 - | ribulose-phosphate 3-epimerase SAK_1799 1792340 - 1791468 - | ribosome-associated GTPase TERM 2329 1792512 - 1792487 - R 79 -7 -4.66938 | gap 1, opp_overlap 1792487 1792486 ATTCCCAACATAAAA GCAGTG-ATCT TATTT AGATACACTGC GCTTTTTTCCAATTA SAK_1800 1793347 - 1792496 - | rRNA (guanine-N1-) methyltransferase (mycinamicin-resistance protein) ksgA 1794223 - 1793351 - | dimethyladenosine transferase TERM 2330 1793670 - 1793650 - G 70 -2.5 -5.15167 | overlap 1793652 1793653 GAGCAGGAACAAAAA CAGTTCTCG GAA CGATAAATG ATACTTTGGCAGTCA SAK_1802 1794700 - 1794251 - | HIT family protein TERM 2331 1794544 - 1794562 + g 95 -8.2 -5.00616 | opp_overlap 1794546 AATCTCTAGGCAATT CATGTAAC TCT GTTACGTG TTTTTTAGAAAGAAA SAK_1803 1795270 - 1794704 - | primase-related protein TERM 2332 1795250 - 1795260 + g 81 -4 -5.52986 | GACAACGATCACTTC TTGA ATA TCAA TTTTTTTCATCAAGT SAK_1804 1796039 - 1795257 - | TatD family hydrolase TERM 2333 1795338 - 1795348 + g 78 -5.4 -5.00884 | overlap 1795327 1795323 CACAGTTATGCCTCG TAGC TCT GCTA TTTTTTCAACGACAT TERM 2334 1796160 - 1796139 - R 86 -5.9 -5.40004 | overlap 1796132 GAGTAAATCAAAAAA GTCAAAACA TTTT TGCTCTGAC TTTTGAATACTTGCT SAK_1805 1796493 - 1796221 - | hypothetical protein SAK_1806 1796904 - 1796512 - | hypothetical protein SAK_1807 1798187 - 1796895 - | hypothetical protein TERM 2335 1797115 - 1797134 + g 70 -6.4 -4.15106 | opp_overlap 1797119 TGAGGACTTAGTTCA GTAACTCC TGTA GGAGCTAC TTTTAAAGATTGATA SAK_1808 1798579 - 1798187 - | hypothetical protein TERM 2336 1798741 - 1798710 - R 95 -8.9 -5.28755 | AAAGATATTAAAAAA GATGATTAATAGC TCTAAT GCTATAAATCATC TGACTCTACTATTTA dltD 1800016 - 1798754 - | dltD protein dltC 1800248 - 1800009 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 1801528 - 1800263 - | dltB protein TERM 2337 1800611 - 1800601 - G 70 -5.4 -4.41494 | TATTTTTAACTAAAA GCTT AAC AAGC CTCATGAAAACAAAG dltA 1803060 - 1801525 - | D-alanine--D-alanyl carrier protein ligase dltS 1804393 - 1803206 - | sensor histidine kinase DltS dltr 1805067 - 1804393 - | DNA-binding response regulator DltR TERM 2338 1805019 - 1805036 + g 74 -4.1 -5.1861 | overlap 1805022 CTGCCAATAAAGCCT GAATAGC CTCT GCTATAC TTTTTTCATCCTCAA TERM 2339 1805399 - 1805374 - R 71 -3.2 -5.18357 | GAAGGTACCAAAAAA GCCACCAGAC TCGAGT ACCTGTTGGC TTGATATTATTTTGC rpmH 1805557 - 1805423 - | 50S ribosomal protein L34 TERM 2340 1805762 - 1805752 - R 80 -5.4 -5.18643 | CCAACTAAAAGAAAA GATG TGC CATC AAAACAATAATAGGT SAK_1816 1807096 - 1805741 - | hypothetical protein TERM 2341 1807276 - 1807258 - R 70 -6.2 -4.2828 | opp_overlap 1807261 TTTGATGTATTAAAA TAATATAA AAC TTATATTA AATAACTGAAACGAC TERM 2342 1807310 - 1807328 + r 74 -5.3 -4.84146 | gap 1, opp_overlap 1807310 AGTCACATTAAAAAA CACG-CTC TAAA GAGACGTG TTTCTTTTCTATACT TERM 2343 1807328 - 1807310 - R 80 -5.3 -5.22312 | gap 1, opp_overlap 1807310 AGTCACATTAAAAAA CACG-CTC TAAA GAGACGTG TTTCTTTTCTATACT proWX 1809069 - 1807342 - | glycine betaine/proline ABC transporter, permease/substrate-binding protein TERM 2344 1808890 - 1808878 - G 83 -6.3 -5.10461 | opp_overlap 1808877 CTTAGCTAAGAAAAA TACAG CAG CTGTA ATTAGTACAATAAAA proV 1810311 - 1809088 - | glycine betaine/proline ABC transporter, ATP-binding protein TERM 2345 1810653 - 1810629 - R 83 -5.8 -5.12916 | overlap 1810624 TATAAAATAACAAAA CACCCTTAGA AAAAA TCTAAAAGTG TTTTTGTTTGTAAGT xpkA 1813065 - 1810687 - | putative phosphoketolase TERM 2346 1812383 - 1812369 - G 81 -7.2 -4.62302 | opp_overlap 1812368 CAACATCTGCAAAAA TAGGTT TCC AACCTA ATCCTTCAAAAAACT TERM 2347 1813147 - 1813112 - R 74 -9.2 -3.1096 | overlap 1813119 AACATATTTTAAAAT TGAAAAACTGCATATC ATGC GACATACAGTCTCTCA TTAGCCATTATAGAA TERM 2348 1813140 - 1813119 - R 78 -5.9 -4.87318 | overlap 1813112 TTTAAAATTGAAAAA CTGCATATC ATGC GACATACAG TCTCTCATTAGCCAT SAK_1820 1814246 - 1813155 - | putative L-ascorbate 6-phosphate lactonase TERM 2349 1814421 - 1814403 - R 72 -2.4 -5.4182 | AAGCACAAATAAAAA GTACTCCC ATT AAAAGTAC TAGCTTTCTCAACTT SAK_1821 1816170 - 1814563 - | PRD domain-containing protein TERM 2350 1815186 - 1815168 - G 79 -3.2 -5.49569 | GATTAACAGAAAAAA TACCATAA CGT TTACGATA TAAGAGTGCCTTGCA SAK_1822 1817069 - 1816308 - | hypothetical protein TERM 2351 1816439 - 1816472 + g 74 -9.7 -2.74461 | gap 1, opp_overlap 1816439 1816440, overlap 1816438 AATCAGTCAGATCAA TCTCTCCT-TCGAAGA GGC TCTTCGAGAGGTGAGG CTTTCCAGCTACCTG TERM 2352 1816471 - 1816440 - G 77 -11 -2.56728 | gap 1, opp_overlap 1816439 1816438, overlap 1816439 ATCAGTCAGATCAAT CTCTCCT-TCGAAGA GGC TCTTCGAGAGGTGAG GCTTTCCAGCTACCT SAK_1823 1818606 - 1817089 - | carbohydrate kinase TERM 2353 1818150 - 1818133 - G 81 -8.5 -4.23213 | CTTATACCGAATAAA GTCCTTT GCAG AAAGGAC CGCCCCTATTGATTT TERM 2354 1818662 - 1818636 - R 100 -11 -4.65895 | opp_overlap 1818643, overlap 1818639 TTGTTGATTTAAAAA GAAGGTACAAGA AAC TCTTGTACCTTG AAAACTCTTCTAATA TERM 2355 1818659 - 1818639 - R 100 -12.7 -4.44608 | opp_overlap 1818643, overlap 1818636 TTGATTTAAAAAGAA GGTACAAGA AAC TCTTGTACC TTGAAAACTCTTCTA SAK_1824 1819661 - 1818672 - | hypothetical protein SAK_1825 1821134 - 1819683 - | PTS system, IIC component, putative TERM 2356 1820800 - 1820781 - G 85 -10 -3.91412 | overlap 1820783 ATTAGATGGGACAAA TACTCGGG TAAT CCCGAGCA AGAAAAGCCCCAATT TERM 2357 1820798 - 1820783 - G 82 -10.4 -3.54447 | overlap 1820781 TAGATGGGACAAATA CTCGGG TAAT CCCGAG CAAGAAAAGCCCCAA TERM 2358 1821185 - 1821196 + r 80 -5.8 -5.0133 | opp_overlap 1821185 TTACCCGTAAAAAAA TGGG AGGT CCCA TTTTTTCAAAAGATG TERM 2359 1821196 - 1821185 - R 86 -5.8 -5.42259 | opp_overlap 1821185 TTACCCGTAAAAAAA TGGG AGGT CCCA TTTTTTCAAAAGATG SAK_1826 1822188 - 1821232 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 2360 1821613 - 1821633 + g 72 -3.9 -4.99056 | AAGCTGATCAAATTC GAGATAGGT TAC ACCAAGCTC TTTTTCCTTATCTTC SAK_1827 1823226 - 1822207 - | hypothetical protein TERM 2361 1823457 - 1823440 - R 93 -6.3 -5.60993 | opp_overlap 1823423 1823440 TTTTTTATAAAAAAA TGCTTGC TCTC GCAAACA TTTTTAAAAAGATTG SAK_1828 1824444 - 1823461 - | LacI family sugar-binding transcriptional regulator TERM 2362 1824569 - 1824545 - R 77 -2.9 -5.70829 | AAGATTATAAAAAAA GACAAACCC ATTATCA AAGTTTGTC TTGCACTAGTATAAT SAK_1829 1825255 - 1824608 - | putative translaldolase araD 1825982 - 1825266 - | L-ribulose-5-phosphate 4-epimerase SAK_1831 1826847 - 1825984 - | putative L-xylulose 5-phosphate 3-epimerase ulaD 1827516 - 1826851 - | 3-keto-L-gulonate-6-phosphate decarboxylase SAK_1833 1828114 - 1827629 - | PTS system, IIA component TERM 2363 1828142 - 1828167 + r 80 -7.5 -4.22414 | opp_overlap 1828141 1828139 1828142 AAAGTCTAAAGATAT GGGAGAGAAAC TTTT GTCTCACTCCC TTTGTCTATTAACTT TERM 2364 1828167 - 1828142 - R 74 -9.7 -2.56413 | opp_overlap 1828142, overlap 1828141 1828139 AAAGTCTAAAGATAT GGGAGAGAAAC TTTT GTCTCACTCCC TTTGTCTATTAACTT SAK_1834 1828459 - 1828181 - | PTS system lactose/cellobiose family IIB subunit ulaA 1829926 - 1828487 - | ascorbate-specific PTS system enzyme IIC TERM 2365 1828987 - 1829000 + g 70 -6.7 -4.01137 | GAAGTTTGTTTGAGA TGCCT TGGA AGGCA TTTGTCAATTCTGTA TERM 2366 1829849 - 1829833 - G 71 -5.1 -4.63218 | GTTTCTTCAATAAAA GATACCC AAT GAGTACC AATAGACCTACGAAG TERM 2367 1830059 - 1830080 + r 100 -10.3 -5.72118 | opp_overlap 1830059 TAATTTACAAAAAAA TCATGTATC CTAA GATACATGA TTTTTTATATTTTTT TERM 2368 1830080 - 1830059 - R 100 -10.3 -5.66684 | opp_overlap 1830059 TAATTTACAAAAAAA TCATGTATC CTAA GATACATGA TTTTTTATATTTTTT SAK_1836 1830711 - 1830094 - | hypothetical protein TERM 2369 1830278 - 1830291 + g 86 -5.3 -5.25805 | GGTAGTTGAATCCTA GCTAA AATA TTAGC TTTTTTGACTTTGTT SAK_1837 1830888 - 1831343 + | hypothetical protein TERM 2370 1831370 - 1831324 - T 79 -3.3 -5.65496 | gap 1, opp_overlap 1831333 1831338, overlap 1831338 TATTAAAAAGAAAAA GTAAACATCAAAAAGTCTGACT GTAC AGTCAGAC-TTTTAATATTAAA TATTTGACCAAACAG TERM 2371 1831333 - 1831362 + T 82 -10.9 -2.50438 | opp_overlap 1831324 1831338, overlap 1831338 GAAAAAGTAAACATC AAAAAGTCTGACT GTAC AGTCAGACTTTTA ATATTAAATATTTGA TERM 2372 1831338 - 1831357 + T 100 -10.8 -4.43681 | opp_overlap 1831338 1831324, overlap 1831333 AGTAAACATCAAAAA GTCTGACT GTAC AGTCAGAC TTTTAATATTAAATA TERM 2373 1831357 - 1831338 - T 100 -10.8 -4.946 | opp_overlap 1831333 1831338, overlap 1831324 AGTAAACATCAAAAA GTCTGACT GTAC AGTCAGAC TTTTAATATTAAATA purA 1832658 - 1831366 - | adenylosuccinate synthetase TERM 2374 1831469 - 1831453 - G 73 -8.7 -3.4617 | opp_overlap 1831467 ACGAACACCAACCAA TTCGCCA ACA CGGCGAA CGTAATTACGTGCAT TERM 2375 1832945 - 1832916 - R 91 -4.5 -5.95946 | gap 1, opp_overlap 1832916 TTAACAATAAAAAAA TTCAACGA-TCT TTTTATT AGAGTCGTTGAA TTTTAAATTATCAAG pfoR 1834051 - 1833029 - | pfoR protein SAK_1840 1834413 - 1835087 + | hypothetical protein TERM 2376 1835121 - 1835142 + F 100 -8.1 -5.49579 | opp_overlap 1835121 CTTATAGATTAATAA GATTGGACT CAAA AGTTCAATC TTTTATTTTTTATGA TERM 2377 1837231 - 1837211 - g 73 -3.3 -5.2204 | CAGAAGGAACAAAAA TAGAACTTC GCC GTAATTCTA ATATTTCCACTGGCG SAK_1841 1835257 - 1837509 + | bifunctional glutamate--cysteine ligase/glutathione synthetase TERM 2378 1837520 - 1837542 + F 100 -11.4 -4.87291 | opp_overlap 1837519 1837517 1837520 TATAACTAAAAAGAG TTCCTTAGGC TAA GCTTAAGGAA TTTTTGGTTAAAATA TERM 2379 1837542 - 1837520 - f 74 -9.2 -3.04125 | opp_overlap 1837520, overlap 1837519 1837517 TATAACTAAAAAGAG TTCCTTAGGC TAA GCTTAAGGAA TTTTTGGTTAAAATA SAK_1842 1837633 - 1838451 + | hypothetical protein TERM 2380 1838554 - 1838564 + G 82 -6.8 -5.0133 | CAACAAGCCAAACTG GGCA AAT TGCC TTTTTTGAAAAACTA TERM 2381 1838627 - 1838614 - g 70 -3.1 -5.02074 | CTATCTCTGAAAAAA CACCA GCTT TGGTA GATACTTTTGTCGGT SAK_1843 1838448 - 1839704 + | hypothetical protein TERM 2382 1839754 - 1839732 - f 93 -7 -5.33405 | opp_overlap 1839732 1839722 TCCACTAAATAAAAA CGATACTGTA AAA CACCGTATCG TTTTTATATCATTAA TERM 2383 1839732 - 1839754 + F 82 -6.3 -5.04175 | opp_overlap 1839732, overlap 1839722 TCCACTAAATAAAAA CGATACTGT AAAAC ACCGTATCG TTTTTATATCATTAA hslO 1839844 - 1840719 + | Hsp33-like chaperonin SAK_1845 1840703 - 1841680 + | tRNA-dihydrouridine synthase family protein TERM 2384 1841702 - 1841689 - f 85 -6.7 -4.99134 | opp_overlap 1841689, overlap 1841683 ACGCTAAATCAAAAA CAGTC CTTT GACTG TTTTTTCCTATCTCT TERM 2385 1841689 - 1841702 + F 88 -6.7 -5.25893 | opp_overlap 1841689 1841683 ACGCTAAATCAAAAA CAGTC CTTT GACTG TTTTTTCCTATCTCT TERM 2386 1842012 - 1842002 - g 73 -6.8 -4.34789 | CAATCTATAAAAGAA GCCT ATA AGGC TAACAACAATGTTTT SAK_1846 1841801 - 1842442 + | deoxynucleoside kinase family protein SAK_1847 1842456 - 1842947 + | phosphinothricin N-acetyltransferase, putative TERM 2387 1843124 - 1843095 - T 100 -15.3 -3.50047 | opp_overlap 1843095 1843100, overlap 1843100 TTCATAAATCTATAA GAAAATGTCCAAA ATAT TTTGGACATTTTC TTTTTATATTAAAAT TERM 2388 1843095 - 1843124 + T 100 -15.3 -5.09762 | opp_overlap 1843095 1843100, overlap 1843100 TTCATAAATCTATAA GAAAATGTCCAAA ATAT TTTGGACATTTTC TTTTTATATTAAAAT TERM 2389 1843119 - 1843100 - T 100 -9.4 -4.81863 | opp_overlap 1843095 1843100, overlap 1843095 AAATCTATAAGAAAA TGTCCAAA ATAT TTTGGACA TTTTCTTTTTATATT TERM 2390 1843100 - 1843119 + T 100 -9.4 -5.40873 | opp_overlap 1843100 1843095, overlap 1843095 AAATCTATAAGAAAA TGTCCAAA ATAT TTTGGACA TTTTCTTTTTATATT TERM 2391 1843137 - 1843164 + T 100 -11.4 -4.67635 | opp_overlap 1843139, overlap 1843139 TTCTTTTTATATTAA AATTCCAGTACC CATC GGTACTGGAATG TTTTATGATTTTGCA TERM 2392 1843139 - 1843162 + T 100 -14 -3.9392 | opp_overlap 1843139, overlap 1843137 CTTTTTATATTAAAA TTCCAGTACC CATC GGTACTGGAA TGTTTTATGATTTTG TERM 2393 1843162 - 1843139 - T 100 -14 -4.34402 | opp_overlap 1843139 1843137 CTTTTTATATTAAAA TTCCAGTACC CATC GGTACTGGAA TGTTTTATGATTTTG clpC 1845614 - 1843167 - | ATP-dependent Clp protease, ATP-binding subunit ClpC ctsR 1846075 - 1845611 - | transcriptional regulator CtsR SAK_1850 1846248 - 1846709 + | hypothetical protein TERM 2394 1846719 - 1846738 + T 77 -4.2 -5.32699 | opp_overlap 1846719 TTCTAGAAAAGTTAA GGTGAGAT GACT GTCTCTCC TTTTTTAATATTTGC TERM 2395 1846807 - 1846778 - T 93 -10.2 -4.35518 | opp_overlap 1846778 1846781 AATTCGATACCAAAA TAAGACACTTGA CTTAAT CCAAGTGTCTTA TTTTAAAATATATTT TERM 2396 1846778 - 1846807 + T 90 -9.5 -4.20074 | opp_overlap 1846778, overlap 1846781 AATTCGATACCAAAA TAAGACACTTG ACTTAATC CAAGTGTCTTA TTTTAAAATATATTT TERM 2397 1846781 - 1846804 + T 74 -6.8 -4.20817 | opp_overlap 1846778, overlap 1846778 TCGATACCAAAATAA GACACTTG ACTTAATC CAAGTGTC TTATTTTAAAATATA tsf 1847909 - 1846869 - | elongation factor Ts TERM 2398 1847976 - 1847949 - R 93 -6.3 -5.58074 | gap 1, opp_overlap 1847949 TAATGATTAAAAAAA CGAGACAGA-GC GGTTT GCATCTGCCCCG TTTTAGGATTTACAA rpsB 1848773 - 1848003 - | 30S ribosomal protein S2 ahpC 1849050 - 1849610 + | alkyl hydroperoxide reductase, subunit C ahpF 1849628 - 1851160 + | NADH dehydrogenase TERM 2399 1851194 - 1851168 - T 100 -12.5 -4.37734 | opp_overlap 1851168 GACAATAATCTAAAA GAGATTGATAC AATAG GTATCAATCTC TTTTTTGGGGTAATA TERM 2400 1851168 - 1851194 + T 100 -12.5 -5.06451 | opp_overlap 1851168 GACAATAATCTAAAA GAGATTGATAC AATAG GTATCAATCTC TTTTTTGGGGTAATA TERM 2401 1851388 - 1851434 + T 72 -9.1 -2.67047 | gap 1, opp_overlap 1851390 1851402, overlap 1851402 AAAAGATTTTATCCA AAGATAACAAAAAA-TCAACGA TTGT TCGTTGATTTTTTTGTTATCAG AATTATTTTTTTAAA TERM 2402 1851432 - 1851390 - T 100 -16.1 -3.66646 | gap 1, opp_overlap 1851388 1851402, overlap 1851402 AAGATTTTATCCAAA GATAACAAAAAA-TCAACGA TTGT TCGTTGATTTTTTTGTTATC AGAATTATTTTTTTA TERM 2403 1851402 - 1851419 + T 100 -8.5 -5.88565 | opp_overlap 1851390 1851402, overlap 1851388 AAAGATAACAAAAAA TCAACGA TTGT TCGTTGA TTTTTTTGTTATCAG TERM 2404 1851419 - 1851402 - T 100 -8.5 -5.66338 | opp_overlap 1851402 1851388, overlap 1851390 AAAGATAACAAAAAA TCAACGA TTGT TCGTTGA TTTTTTTGTTATCAG SAK_1856 1853506 - 1851437 - | monovalent cation:proton antiporter-1 (CPA1) family protein TERM 2405 1853241 - 1853231 - G 73 -5.4 -4.59511 | AATAGCTGTTAAAAA TACC GTT GGTA AGATTAAGTAAAGAA SAK_1857 1853744 - 1853508 - | hypothetical protein SAK_1858 1853911 - 1854864 + | U61 family peptidase TERM 2406 1854901 - 1854870 - T 100 -8 -6.04419 | opp_overlap 1854872, overlap 1854872 AAAAGAATAAAAAAA TACTCCTGCTACTC ATCT GAGTAACGGGAGTT TATCATTTAGAGTTA TERM 2407 1854872 - 1854899 + T 91 -10.6 -4.14056 | opp_overlap 1854872 1854870 AAGAATAAAAAAATA CTCCTGCTACTC ATCT GAGTAACGGGAG TTTATCATTTAGAGT TERM 2408 1854899 - 1854872 - T 95 -10.6 -4.59954 | opp_overlap 1854872, overlap 1854870 AAGAATAAAAAAATA CTCCTGCTACTC ATCT GAGTAACGGGAG TTTATCATTTAGAGT pepO 1856809 - 1854914 - | endopeptidase O TERM 2409 1855868 - 1855879 + g 76 -2.2 -5.56673 | AGGTCCTGAAGCAAG GTAG TAAG CTGC TTTTTTCTTATCCAT TERM 2410 1856448 - 1856467 + g 71 -7.2 -3.83154 | opp_overlap 1856439 AAGTCAGGAGCCACA CCAAATGG AAAT TCATTTGG TTTACCTTCTAGTTC SAK_1860 1856957 - 1857940 + | oxidoreductase, NAD-binding TERM 2411 1857974 - 1857938 - f 100 -12.5 -5.34365 | opp_overlap 1857938 1857944, overlap 1857942 1857944 CCAGAAGAAGAAAAA TGAAGAGAGCTTGACAA TGA TTGTCAAGCTCTTTTTA GTTAATATACACTAC TERM 2412 1857938 - 1857974 + F 100 -16.9 -2.55999 | opp_overlap 1857938 1857942 1857944, overlap 1857944 CCAGAAGAAGAAAAA TGAAGAGAGCTTGACAA TGA TTGTCAAGCTCTTTTTA GTTAATATACACTAC TERM 2413 1857970 - 1857942 - f 100 -13.3 -3.97836 | opp_overlap 1857938 1857944, overlap 1857938 1857944 AAGAAGAAAAATGAA GAGAGCTTGACAA TGA TTGTCAAGCTCTT TTTAGTTAATATACA TERM 2414 1857968 - 1857944 - f 100 -15.9 -3.54195 | opp_overlap 1857938 1857944, overlap 1857942 1857938 GAAGAAAAATGAAGA GAGCTTGACAA TGA TTGTCAAGCTC TTTTTAGTTAATATA TERM 2415 1857944 - 1857968 + F 100 -15.9 -4.91873 | opp_overlap 1857944 1857942 1857938, overlap 1857938 GAAGAAAAATGAAGA GAGCTTGACAA TGA TTGTCAAGCTC TTTTTAGTTAATATA TERM 2416 1859479 - 1859466 - g 73 -3.1 -5.16132 | opp_overlap 1859466 GATATTAAAACAAAA CCAAC ACTG ATTGG TGATATTGAACTTTT SAK_1862 1859250 - 1859894 + | cyclic nucleotide-binding domain-containing protein def 1859960 - 1860574 + | peptide deformylase TERM 2417 1860585 - 1860606 + T 100 -8.8 -5.45813 | opp_overlap 1860585 AATAAGGACAAATAA CCTAGAGA TAATTT TCTCTAGG TTTTATTTTTTAATA TERM 2418 1860606 - 1860585 - T 87 -8.8 -4.1774 | opp_overlap 1860585 AATAAGGACAAATAA CCTAGAGA TAATTT TCTCTAGG TTTTATTTTTTAATA SAK_1864 1861647 - 1860646 - | transcriptional regulator, putative SAK_1865 1862671 - 1861727 - | hypothetical protein SAK_1866 1862739 - 1862987 + | hypothetical protein TERM 2419 1863063 - 1863096 + T 100 -12.6 -5.79588 | opp_overlap 1863063 TGAATATACTAAAAA CACTCCTACCTCTA TTTTAC TAGAAGTAGGAGTG TTTTTTTCATTTTAG TERM 2420 1863096 - 1863063 - T 100 -14.8 -4.87807 | opp_overlap 1863063 TGAATATACTAAAAA CACTCCTACCTCTA TTTTAC TAGAAGTAGGAGTG TTTTTTTCATTTTAG SAK_1867 1863773 - 1863159 - | nitroreductase family protein SAK_1868 1864331 - 1863906 - | MarR family transcriptional regulator TERM 2421 1863998 - 1864010 + g 100 -7.7 -5.66684 | opp_overlap 1863997 CTACACGTTTAATAT GCTCT GGT AGAGC TTTTTTTATCACTTC TERM 2422 1864453 - 1864428 - R 100 -13.5 -3.91716 | opp_overlap 1864428 1864431, overlap 1864431 GCAGCTGGCAAATAA TAAGGTTGAGT AACT ACTCAACCTTA TTGCTTAGAAGAAAT TERM 2423 1864428 - 1864453 + r 100 -13.5 -3.33815 | opp_overlap 1864428 1864431, overlap 1864431 GCAGCTGGCAAATAA TAAGGTTGAGT AACT ACTCAACCTTA TTGCTTAGAAGAAAT TERM 2424 1864431 - 1864450 + r 90 -10.8 -3.81146 | opp_overlap 1864428 1864431, overlap 1864428 GCTGGCAAATAATAA GGTTGAGT AACT ACTCAACC TTATTGCTTAGAAGA TERM 2425 1864450 - 1864431 - R 93 -10.8 -4.08557 | opp_overlap 1864431 1864428, overlap 1864428 GCTGGCAAATAATAA GGTTGAGT AACT ACTCAACC TTATTGCTTAGAAGA polC 1868864 - 1864458 - | DNA polymerase III PolC TERM 2426 1868821 - 1868798 - G 70 -2.6 -5.23316 | gap 1 CAGCAGACGAAAAAA CACTT-AAATT CTT AATTTCAAGCG GCATTTCAATCTGAT SAK_1870 1869571 - 1868987 - | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase, putative TERM 2427 1869458 - 1869470 + g 72 -7.7 -3.78785 | CGATGCACTAGTGAC TGTCG GTT CGACA TTATCATTTTTATAA proS 1871549 - 1869696 - | prolyl-tRNA synthetase TERM 2428 1870359 - 1870339 - G 75 -6.9 -4.28361 | overlap 1870342 TTAACTCCAGTAAAA TGATAACCA TCT TGGTTAGCA CCAGACACAGCATTA TERM 2429 1871582 - 1871610 + r 71 -7.7 -3.52063 | AATCAAAGTTGATTC TTTTTCAATTG AGAATTG CAATTGAAAAA TTCGTATTTCCTTTC SAK_1872 1872900 - 1871641 - | M50A family peptidase TERM 2430 1872115 - 1872138 + g 91 -6.8 -5.31158 | overlap 1872116 CGTTTTCACCACCTC TTTGCTCTTA ATTT TAAGGGCAAG TTTTTGGTTTTTTTC TERM 2431 1872116 - 1872137 + g 74 -8.1 -3.75035 | overlap 1872115 GTTTTCACCACCTCT TTGCTCTTA ATTT TAAGGGCAA GTTTTTGGTTTTTTT cdsA 1873725 - 1872931 - | phosphatidate cytidylyltransferase uppS 1874492 - 1873740 - | undecaprenyl diphosphate synthase TERM 2432 1874355 - 1874381 + g 86 -9.4 -4.21787 | TTGAAGAGCATCCAT CCCCGCCTTATG TCC CATAACGCGTGG TTTTAAACGTTTTTT TERM 2433 1874648 - 1874628 - R 85 -6.9 -5.02715 | ACAGCAAACTAAAAA GACCAGA ACAATCA TCTGGTC CTACATATCTTATTC yajC 1874999 - 1874658 - | preprotein translocase subunit YajC SAK_1876 1875420 - 1875076 - | hypothetical protein TERM 2434 1875486 - 1875474 - R 80 -7.7 -4.15565 | CCTATGATGGCAAAA CTTGC AAG GCAAG AGTAACAACGATTCT TERM 2435 1875581 - 1875595 + r 93 -10 -4.66833 | opp_overlap 1875581 GACTCATCAAAAAAA CTGAGC ATA GCTCAG TTTTTCAGATTGAAG TERM 2436 1875595 - 1875581 - R 100 -10 -5.53991 | opp_overlap 1875581 GACTCATCAAAAAAA CTGAGC ATA GCTCAG TTTTTCAGATTGAAG SAK_1877 1877041 - 1875572 - | ISSag8, transposase TERM 2437 1875638 - 1875610 - G 80 -11.1 -3.12351 | opp_overlap 1875598 1875610, overlap 1875616 GTTTTTCAGATTGAA GACAAACTGGAAT GTT AATCCAGCTTGTC TTTTCTTTTACTATT TERM 2438 1875610 - 1875638 + g 100 -8.9 -5.17488 | opp_overlap 1875610 1875616, overlap 1875598 GTTTTTCAGATTGAA GACAAACTGGAAT GTT AATCCAGCTTGTC TTTTCTTTTACTATT TERM 2439 1877096 - 1877123 + r 76 -7.1 -4.22678 | opp_overlap 1877096 TAGACAAACAGAAAA GTCCTTAGAAA AGTGAA TGTCTAAGGAC TTTGTCTTCAATCTG TERM 2440 1877123 - 1877096 - R 86 -7.1 -4.87328 | opp_overlap 1877096 TAGACAAACAGAAAA GTCCTTAGAAA AGTGAA TGTCTAAGGAC TTTGTCTTCAATCTG TERM 2441 1877138 - 1877164 + r 100 -11 -4.17523 | opp_overlap 1877144, overlap 1877144 CTTTGTCTTCAATCT GAAAAACTGAGC ATA GCTCAGTTTTTA TTTTACACCTTATTT TERM 2442 1877144 - 1877158 + r 100 -10 -5.45802 | opp_overlap 1877144, overlap 1877138 CTTCAATCTGAAAAA CTGAGC ATA GCTCAG TTTTTATTTTACACC TERM 2443 1877158 - 1877144 - R 93 -10 -4.66833 | opp_overlap 1877144 1877138 CTTCAATCTGAAAAA CTGAGC ATA GCTCAG TTTTTATTTTACACC SAK_1878 1878337 - 1877174 - | malate dehydrogenase (decarboxylating) TERM 2444 1878134 - 1878146 + g 90 -4.1 -5.88471 | TGAACCATCACTTAC TACGG CTA CTGTA TTTTTTTTAGTCGTC SAK_1879 1879699 - 1878362 - | citrate, cation symporter (CCS) family protein TERM 2445 1879448 - 1879438 - G 70 -3.2 -4.89838 | CTAATAAAGATAAAA TAGC TGA GCCA CCGAAGTTTTTAAAA TERM 2446 1880093 - 1880079 - g 71 -4.3 -4.85782 | GTCTCCAAAAACAAA TGCTA TTCCT TAGCA AAAAATCAAATTTAG SAK_1880 1879853 - 1881379 + | sensor histidine kinase, putative SAK_1881 1881381 - 1882061 + | response regulator TERM 2447 1882076 - 1882057 - T 100 -8.6 -5.94713 | opp_overlap 1882057 AGCTTATAAAAAAAA CTTAGGCC TGTA GACCTAAG TTTTTTTAATCTTCG TERM 2448 1882057 - 1882076 + T 93 -6.4 -5.63374 | opp_overlap 1882057 AGCTTATAAAAAAAA CTTAGGCC TGTA GACCTAAG TTTTTTTAATCTTCG galE 1883077 - 1882082 - | UDP-glucose 4-epimerase dexB 1884772 - 1883165 - | glucan 1,6-alpha-glucosidase TERM 2449 1884889 - 1884852 - R 83 -9.5 -3.90744 | gap 1, opp_overlap 1884863, overlap 1884854 1884857 1884863 CGTTTGCGCAAATAA CATT-ATAAAAAGGCTGG AAC CCAACCTTTTTATGAATA TCGCTTATACCTTAA TERM 2450 1884886 - 1884854 - R 90 -11.5 -3.54488 | opp_overlap 1884863, overlap 1884852 1884857 1884863 TTTGCGCAAATAACA TTATAAAAAGGCTGG AAC CCAACCTTTTTATGA ATATCGCTTATACCT TERM 2451 1884883 - 1884857 - R 100 -13.2 -2.90309 | opp_overlap 1884863, overlap 1884854 1884852 1884863 GCGCAAATAACATTA TAAAAAGGCTGG AAC CCAACCTTTTTA TGAATATCGCTTATA TERM 2452 1884863 - 1884877 + r 74 -5.6 -4.89852 | opp_overlap 1884857 1884854 1884852 1884863 ATAACATTATAAAAA GGCTGG AAC CCAACC TTTTTATGAATATCG TERM 2453 1884877 - 1884863 - R 89 -7.8 -4.9934 | opp_overlap 1884863, overlap 1884857 1884854 1884852 ATAACATTATAAAAA GGCTGG AAC CCAACC TTTTTATGAATATCG msmK 1886034 - 1884901 - | sugar ABC transporter, ATP-binding protein TERM 2454 1884959 - 1884969 + g 72 -4 -4.92783 | opp_overlap 1884959 TTAGCAACATTAAAC GTTA GGT TAAC TTTTTCTCCTGGATT SAK_1885 1886986 - 1886135 - | Fis family DNA-binding protein TERM 2455 1886271 - 1886285 + g 76 -10 -3.01791 | overlap 1886284 GCCTTAGCCGTTTTA GCAAGG TTC CCTTGC TCTTGCCACAAGGCT TERM 2456 1886810 - 1886796 - G 71 -8.6 -3.1637 | AGATAGCGGTACCAA GGATTC TGA GAATCC ACTGAACTCGCATCT TERM 2457 1887068 - 1887052 - R 100 -10.9 -5.00895 | overlap 1887030 TTGAGCACAGAAAAA GAGGAGA ATG TCTCCTC AGAAAATTTCTGTTA SAK_1886 1887977 - 1887081 - | lactose operon protein LacX lacD 1889008 - 1888031 - | tagatose 1,6-diphosphate aldolase lacC 1889942 - 1889010 - | tagatose-6-phosphate kinase lacB 1890468 - 1889953 - | galactose-6-phosphate isomerase subunit LacB lacA 1890914 - 1890489 - | galactose-6-phosphate isomerase subunit LacA TERM 2458 1890767 - 1890787 + g 71 -9.1 -3.21395 | overlap 1890765 CTTCTTTTTGATTCA CTTTAGCAA CGA TTGCTAAGG TATTATCAACGAAAT SAK_1891 1893316 - 1891163 - | sialidase domain-containing protein TERM 2459 1891670 - 1891682 + g 74 -4.1 -5.22104 | TTTCAATTGAACGGG TACGG ATT CTGTA TTTTGTTCTTTTTTA TERM 2460 1892789 - 1892773 - G 71 -7.3 -3.94333 | opp_overlap 1892773 1892776, overlap 1892776 TATCAACACAGCAAA CAAGGCA GTG TGCCTTA GCTTTTAATTTTTGC TERM 2461 1892786 - 1892776 - G 70 -6.8 -4.086 | opp_overlap 1892776 1892773, overlap 1892773 CAACACAGCAAACAA GGCA GTG TGCC TTAGCTTTTAATTTT TERM 2462 1893247 - 1893277 + g 74 -4 -5.12068 | TACGATTTTCTTCTG TTGCTATTTCCGCT TTT AGAGGAGATGACAA TTTTTCTTGACTGTC SAK_1892 1893652 - 1893377 - | hypothetical protein SAK_1893 1895300 - 1893852 - | PTS system, IIC component, putative SAK_1894 1895645 - 1895340 - | PTS system, IIB component, putative SAK_1895 1896111 - 1895647 - | PTS system, IIA component, putative SAK_1896 1896329 - 1897105 + | lactose phosphotransferase system repressor, putative TERM 2463 1897163 - 1897111 - T 89 -8.8 -4.70169 | gap 2, opp_overlap 1897116, overlap 1897114 1897115 1897116 1897118 TTACATGTAATAAAA CAAGTGAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTCT-TTA TTTAGTGATTATAAC TERM 2464 1897161 - 1897114 - T 100 -10.8 -4.44914 | gap 1, opp_overlap 1897116, overlap 1897111 1897115 1897116 1897118 CATGTAATAAAACAA GTGAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTCTT TATTTAGTGATTATA TERM 2465 1897160 - 1897115 - T 100 -14.3 -3.25864 | gap 1, opp_overlap 1897116, overlap 1897114 1897111 1897116 1897118 ATGTAATAAAACAAG TGAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTCT TTATTTAGTGATTAT TERM 2466 1897116 - 1897159 + T 100 -17.8 -4.53349 | gap 1, opp_overlap 1897115 1897114 1897111 1897116 1897118 TGTAATAAAACAAGT GAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTC TTTATTTAGTGATTA TERM 2467 1897159 - 1897116 - T 100 -17.8 -2.54434 | gap 1, opp_overlap 1897116, overlap 1897115 1897114 1897111 1897118 TGTAATAAAACAAGT GAGCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGCTC TTTATTTAGTGATTA TERM 2468 1897157 - 1897118 - T 100 -14.6 -2.79659 | gap 1, opp_overlap 1897116, overlap 1897116 1897115 1897114 1897111 TAATAAAACAAGTGA GCCACTACTAGAAACCTGT TAT ACAGCTTT-TAGTAGTGGC TCTTTATTTAGTGAT TERM 2469 1897360 - 1897316 - T 70 -8.3 -3.01918 | gap 1, opp_overlap 1897327 1897331 1897353 1897354, overlap 1897327 GCACGCTAGAAATCA TAACTAAAAAACAAACAAGT ACGGTG ACTTGTTTG-TTTTTAGTTG TCAGCTAAGTTTACT TERM 2470 1897327 - 1897350 + T 91 -8.3 -4.93365 | opp_overlap 1897316 1897327, overlap 1897331 ATCATAACTAAAAAA CAAACAAGT ACGGTG ACTTGTTTG TTTTTAGTTGTCAGC TERM 2471 1897350 - 1897327 - T 100 -8.3 -5.33848 | opp_overlap 1897327 1897331, overlap 1897316 ATCATAACTAAAAAA CAAACAAGT ACGGTG ACTTGTTTG TTTTTAGTTGTCAGC SAK_1897 1899969 - 1897387 - | streptococcal histidine triad family protein SAK_1898 1900919 - 1899996 - | laminin-binding surface protein TERM 2472 1901164 - 1901142 - R 79 -4.8 -5.24416 | opp_overlap 1901158 GAACCACAATAAAAA GAGCCAAGCA TTT TGCCCAACTC TTTGGTTTTTTATTT TERM 2473 1901158 - 1901169 + r 87 -4.4 -5.88476 | opp_overlap 1901142 AGCCAAGCATTTTGC CCAA CTCT TTGG TTTTTTATTTATTTT dtd 1901617 - 1901174 - | D-tyrosyl-tRNA deacylase relA 1903843 - 1901627 - | GTP pyrophosphokinase TERM 2474 1904014 - 1903980 - H 79 -6.7 -4.55295 | gap 1, opp_overlap 1903983, overlap 1903983 TCCTTTATAAATAAA CGA-TTGTTTTTAGTG TAAT CACTAAAAATAATTCG TAAATGAGATTGATT TERM 2475 1903983 - 1904010 + H 78 -9.4 -3.1876 | opp_overlap 1903980 1903983 TTTATAAATAAACGA TTGTTTTTAGTG TAAT CACTAAAAATAA TTCGTAAATGAGATT cpdB 1904103 - 1906505 + | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein TERM 2476 1906556 - 1906501 - f 82 -6.4 -4.94811 | opp_overlap 1906519, overlap 1906505 TTAAAAAGAAACAAA TATAGTCATCACTAAAAACTGAGG TTGATTGG CCTCAGTTTTTAGTCTCAACAATA GATTTTCTCTCTAAA TERM 2477 1906519 - 1906538 + F 80 -6.4 -4.8048 | opp_overlap 1906505 1906501 AGTCATCACTAAAAA CTGAGGTT GATT GGCCTCAG TTTTTAGTCTCAACA nrdI 1906662 - 1907117 + | hypothetical protein SAK_1903 1907128 - 1908165 + | M42 family peptidase SAK_1904 1908165 - 1908662 + | hypothetical protein TERM 2478 1908866 - 1908840 - T 100 -19.6 -3.80841 | opp_overlap 1908840 AGGACGATGATTAAA CTCCTCGGAATC AAT GATTCCGAGGAG TTTTTCTATATTCTC TERM 2479 1908840 - 1908866 + T 100 -19.6 -5.12474 | opp_overlap 1908840 AGGACGATGATTAAA CTCCTCGGAATC AAT GATTCCGAGGAG TTTTTCTATATTCTC SAK_1905 1909921 - 1908884 - | ABC transporter, substrate-binding protein SAK_1906 1910706 - 1909933 - | AraC family DNA-binding response regulator SAK_1907 1912359 - 1910710 - | hypothetical protein TERM 2480 1911445 - 1911475 + g 74 -4 -5.15634 | overlap 1911446 GGAAATGGCATCCAT ATCTAGCACCAT TTGATTT ATGGCGCTAGAA TTTTTTACTGCGATG TERM 2481 1911446 - 1911474 + g 72 -7.5 -3.68658 | overlap 1911445 GAAATGGCATCCATA TCTAGCACCAT TTGATTT ATGGCGCTAGA ATTTTTTACTGCGAT TERM 2482 1912478 - 1912443 - R 90 -4.1 -6.09196 | CTCAAAAGAAAAAAA GATAAGCTAAACAAG TATCGT CTTGTTCCACTTACC TTTAATGCTAGGAGA SAK_1908 1913324 - 1912497 - | PTS system mannose/fructose/sorbose family IIDsubunit SAK_1909 1914130 - 1913321 - | PTS system mannose/fructose/sorbose family IIC subunit SAK_1910 1914637 - 1914146 - | PTS system mannose/fructose/sorbose family IIB subunit SAK_1911 1915080 - 1914655 - | PTS system mannose/fructose/sorbose family IIA subunit TERM 2483 1915285 - 1915257 - R 74 -3.1 -5.35721 | ACAGAACAATAAAAA GGTCATGTATCCT AAT AGTTTACACAACC TTTACATCACTATAA SAK_1912 1916379 - 1915327 - | hypothetical protein TERM 2484 1916554 - 1916530 - R 85 -5.1 -5.68438 | TTAGGAAATAAAAAA GCTGATTTC GCAAAAG AAAATCAGC TTAGAATAATTTCTT SAK_1913 1917498 - 1916590 - | hypothetical protein SAK_1914 1917742 - 1917464 - | hypothetical protein TERM 2485 1918652 - 1918619 - H 100 -11.9 -4.03234 | opp_overlap 1918624, overlap 1918620 CTCTCCCTATACAAA CTTAAGCGACAAGGA AGAT TCCCTATCGCTTAAA TAAAAAATCAATTAT TERM 2486 1918651 - 1918620 - H 100 -13.2 -3.01726 | opp_overlap 1918624, overlap 1918619 TCTCCCTATACAAAC TTAAGCGACAAGGA AGAT TCCCTATCGCTTAA ATAAAAAATCAATTA TERM 2487 1919047 - 1919061 + H 70 -4.3 -4.76041 | TTGGACGCGTTGCAA TAGCT GTTTA AGCTA TTTTTAATAAGTATA SAK_1916 1919126 - 1919308 + | ABC transporter, ATP-binding protein, truncation rgfC 1920713 - 1919379 - | histidine kinase SAK_1918 1921462 - 1921118 - | response regulator TERM 2488 1921616 - 1921653 + r 74 -6.5 -4.43213 | gap 1, opp_overlap 1921616 CATATTTTTCAAAAA GCACCCTAAGTCTTGTTT TAT AGACAA-ATTTAGGATGC TTTTAATATATTAAA rgfB 1922508 - 1921678 - | hypothetical protein TERM 2489 1922537 - 1922515 - R 77 -7.7 -3.96148 | opp_overlap 1922511, overlap 1922500 1922518 TCCTTTCATCAGAAA GAAGCTGAG ACTTG CCCAGCTCC TATCGTTTGTTACAG SAK_1920 1924730 - 1922547 - | PTS system, glucose-specific IIABC component, putative TERM 2490 1924838 - 1924884 + r 72 -2.6 -5.42164 | gap 1, opp_overlap 1924850, overlap 1924845 1924850 ATATATTTTTTCTGA ATTACTAA-AAAAGTCTAGAT AATATC ATCTAGACTTTTATTTGTGAG TTTTTATTGTTTGTG TERM 2491 1924845 - 1924876 + r 77 -7.5 -4.10363 | opp_overlap 1924850, overlap 1924838 1924850 TTTTCTGAATTACTA AAAAAGTCTAGAT AATATC ATCTAGACTTTTA TTTGTGAGTTTTTAT TERM 2492 1924871 - 1924850 - R 93 -8.1 -5.2189 | opp_overlap 1924845 1924838 1924850 TGAATTACTAAAAAA GTCTAGATA ATAT CATCTAGAC TTTTATTTGTGAGTT TERM 2493 1924850 - 1924871 + r 88 -7.4 -5.01553 | opp_overlap 1924850, overlap 1924845 1924838 TGAATTACTAAAAAA GTCTAGAT AATATC ATCTAGAC TTTTATTTGTGAGTT SAK_1921 1926543 - 1924888 - | sensor histidine kinase TERM 2494 1925013 - 1925061 + g 81 -4.2 -5.39755 | overlap 1925013 1925014 1925016 AACCAGTCCCCCCAA C-TATTTTTGAGCGACTTTTATCG ACG CGATAGAAA-CGTTCGAAAATACG TTTTTTGTCCTTCTC SAK_1922 1927213 - 1926536 - | phosphate regulon transcriptinal regulatory protein PhoB, putative phoU 1927869 - 1927213 - | phosphate transport system regulatory protein PhoU pstB 1928615 - 1927866 - | phosphate ABC transporter, ATP-binding protein pstA 1929486 - 1928608 - | phosphate ABC transporter, permease protein PtsA pstC 1930333 - 1929488 - | phosphate ABC transporter, permease protein PstC TERM 2495 1930312 - 1930275 - G 89 -12.1 -3.32966 | opp_overlap 1930273 1930284 1930307, overlap 1930273 ATAGCTGATATAACA CTGACGCAAGCTGTGAT GAAA AACACAGCTTGCATAAG ACCTTCTTTTGTTTG SAK_1927 1931229 - 1930348 - | phosphate ABC transporter, phosphate-binding protein, putative SAK_1928 1931920 - 1931360 - | hypothetical protein SAK_1929 1932657 - 1931917 - | hypothetical protein TERM 2496 1931988 - 1932003 + g 70 -5.4 -4.42386 | gap 1 CTGTGCGCATGATGC GTG-GCC CCA GGCCCAC TTTTATCGCTCCAGC TERM 2497 1932553 - 1932540 - G 80 -6.7 -4.77036 | opp_overlap 1932540 1932543 1932544, overlap 1932544 TGGTATCATCAAAAA CCAAG ACCA CTTGG TCATCTTCTGTCAAT prmA 1933610 - 1932657 - | ribosomal protein L11 methyltransferase SAK_1931 1934065 - 1933607 - | hypothetical protein TERM 2498 1933976 - 1933993 + g 74 -4.9 -4.87893 | ATCGCCTTCAATTCT TATGAGG ATAC CTTCATA TTTTTCATTCCACTT SAK_1932 1934189 - 1934905 + | MerR family transcriptional regulator TERM 2499 1934913 - 1934938 + T 100 -9.2 -5.9218 | opp_overlap 1934918 GCCAATAAACTATCA GAAAACTAGA CAATCA TCTAGTTTTC TTTTTTTATTCTATC SAK_1933 1935414 - 1934944 - | acetyltransferase SAK_1934 1935844 - 1935386 - | NUDIX family hydrolase TERM 2500 1935588 - 1935574 - GR 88 -7.2 -4.98255 | GTCCAACCATAAAAA CTGATA ATT TATCAG GCTTCAACATATCCC SAK_1935 1936145 - 1935837 - | hypothetical protein SAK_1936 1936658 - 1936188 - | hypothetical protein TERM 2501 1936743 - 1936753 + H 71 -5.4 -4.63863 | opp_overlap 1936743 CAGGTTAATCAAAAG GTAG TTC CTAC TTATTTTTATGTTAC SAK_1937 1936894 - 1937475 + | acetyltransferase SAK_1938 1937468 - 1938736 + | recombination factor protein RarA TERM 2502 1938759 - 1938775 + T 71 -8.1 -3.18268 | overlap 1938757 TTTTAAAAATCGCAA TCGATTT CAA AAATCGA TAATTTTGCTTGAAA TERM 2503 1939110 - 1939123 + T 87 -5.3 -5.69379 | opp_overlap 1939101 1939110, overlap 1939101 ACTATACAAAAAAAG CCTTT GTTT AAAGG TTTTTTTGCTTGTCT SAK_1940 1940435 - 1939326 - | hypothetical protein TERM 2504 1940181 - 1940167 - G 73 -8.6 -3.41602 | opp_overlap 1940166 1940167 GTTATCGCACCATAA TGCTGA AAT TCAGCA ATTGATTGACTTAAC TERM 2505 1940351 - 1940377 + g 72 -3.8 -5.01732 | opp_overlap 1940340 1940375, overlap 1940354 AATATAAATGTTCAA CATTTTCTTTAT TTG ATAAAGCAATTG TTTTTTCAACAAATT TERM 2506 1940528 - 1940512 - R 79 -5.1 -5.2422 | opp_overlap 1940512 1940505 AATTACACTAAAAAA GAAGCCC TTG AGACTTC TTTGTTTATTTGTTT SAK_1941 1940784 - 1940575 - | hypothetical protein SAK_1942 1941013 - 1940873 - | hypothetical protein SAK_1943 1942166 - 1941036 - | phage integrase family site specific recombinase SAK_1944 1942355 - 1942170 - | hypothetical protein TERM 2507 1942405 - 1942427 + r 100 -7 -5.60993 | GAATATTTTTTCTAT GTCGACTTCT TTC ACAAGTCGGC TTTTTTTATGCCCCA SAK_1945 1943444 - 1942416 - | replication initiation factor family protein SAK_1946 1943866 - 1943447 - | hypothetical protein SAK_1947 1944365 - 1944192 - | hypothetical protein TERM 2508 1945071 - 1945050 - g 91 -5.2 -5.86465 | AATAATAGAAAAAAA CTACTTCT TAGTTT AGAAGCAG AACTAAAAAAAATTA SAK_1948 1944822 - 1945316 + | transcriptional regulator, putative TERM 2509 1945364 - 1945307 - T 100 -10.3 -5.27938 | opp_overlap 1945310 1945311 1945322, overlap 1945308 1945310 1945311 1945317 AGCTTTAAATAAAAA CGATGAATAATAAAAGTAGAATGAC TTTAGTTG GTCATTCTACTTTTATTATTCCTTT TCAGCCTCAGATTTC TERM 2510 1945363 - 1945308 - T 100 -13.8 -3.75678 | opp_overlap 1945310 1945311 1945322, overlap 1945307 1945310 1945311 1945317 GCTTTAAATAAAAAC GATGAATAATAAAAGTAGAATGAC TTTAGTTG GTCATTCTACTTTTATTATTCCTT TTCAGCCTCAGATTT TERM 2511 1945310 - 1945361 + T 100 -17.1 -4.11394 | opp_overlap 1945308 1945307 1945310 1945311 1945317, overlap 1945311 1945322 TTTAAATAAAAACGA TGAATAATAAAAGTAGAATGACT TTAGTT GGTCATTCTACTTTTATTATTCC TTTTCAGCCTCAGAT TERM 2512 1945361 - 1945310 - T 100 -16.4 -3.45131 | opp_overlap 1945310 1945311 1945322, overlap 1945308 1945307 1945311 1945317 TTTAAATAAAAACGA TGAATAATAAAAGTAGAATGAC TTTAGTTG GTCATTCTACTTTTATTATTCC TTTTCAGCCTCAGAT TERM 2513 1945311 - 1945360 + T 100 -20.6 -3.06515 | opp_overlap 1945310 1945308 1945307 1945311 1945317, overlap 1945310 1945322 TTAAATAAAAACGAT GAATAATAAAAGTAGAATGACT TTAGTT GGTCATTCTACTTTTATTATTC CTTTTCAGCCTCAGA TERM 2514 1945360 - 1945311 - T 100 -19.9 -2.65994 | opp_overlap 1945311 1945310 1945322, overlap 1945310 1945308 1945307 1945317 TTAAATAAAAACGAT GAATAATAAAAGTAGAATGAC TTTAGTTG GTCATTCTACTTTTATTATTC CTTTTCAGCCTCAGA TERM 2515 1945354 - 1945317 - T 100 -13.1 -3.82419 | opp_overlap 1945311 1945310 1945322, overlap 1945311 1945310 1945308 1945307 AAAAACGATGAATAA TAAAAGTAGAATGAC TTTAGTTG GTCATTCTACTTTTA TTATTCCTTTTCAGC TERM 2516 1945322 - 1945349 + T 95 -9.3 -4.96523 | opp_overlap 1945317 1945311 1945310 1945308 1945307, overlap 1945311 1945310 CGATGAATAATAAAA GTAGAATGACT TTAGTT GGTCATTCTAC TTTTATTATTCCTTT SAK_1949 1946553 - 1945603 - | hypothetical protein SAK_1950 1946624 - 1947214 + | DJ-1/PfpI family protein TERM 2517 1947416 - 1947401 - T 81 -3.2 -5.85011 | opp_overlap 1947401 CAAAAATGAAAAAAA GCCTTA TTTA TAGGGC TTTTTAGCTTGTCAA TERM 2518 1947401 - 1947416 + T 74 -5.4 -4.78149 | opp_overlap 1947401 CAAAAATGAAAAAAA GCCTTA TTTA TAGGGC TTTTTAGCTTGTCAA SAK_1952 1948483 - 1948097 - | hypothetical protein SAK_1953 1949162 - 1948590 - | hypothetical protein TERM 2519 1949075 - 1949092 + g 78 -4.1 -5.31158 | opp_overlap 1949074 1949077, overlap 1949077 TGTTCCCTACAATAT CACCTCT TTTC AGAGGTA TTTTTACTTTTTTTG TERM 2520 1949077 - 1949090 + g 73 -6.7 -4.22041 | opp_overlap 1949074 1949077, overlap 1949075 TTCCCTACAATATCA CCTCT TTTC AGAGG TATTTTTACTTTTTT SAK_1954 1949496 - 1949164 - | hypothetical protein TERM 2521 1949916 - 1949931 + H 100 -7.6 -5.35354 | opp_overlap 1949916, overlap 1949910 ACTATACATCAAAAA GCCTTT ATCT AAAGGC TTTTTTGCTTGTCTA TERM 2522 1949931 - 1949916 - H 87 -7.6 -4.85129 | opp_overlap 1949916 1949910 ACTATACATCAAAAA GCCTTT ATCT AAAGGC TTTTTTGCTTGTCTA SAK_1955 1950930 - 1951058 + | hypothetical protein TERM 2523 1951232 - 1951189 - f 77 -9.2 -3.19463 | opp_overlap 1951183 1951191 1951195, overlap 1951190 1951198 CCTATTATTGAGGAA TCTGAATTACCTCTTTTTAT TATA ATAAAAAGAGGTAATTTAAT TAATTTAAAAGAAGT TERM 2524 1951231 - 1951190 - f 95 -12.7 -2.51464 | opp_overlap 1951183 1951191 1951195, overlap 1951189 1951198 CTATTATTGAGGAAT CTGAATTACCTCTTTTTAT TATA ATAAAAAGAGGTAATTTAA TTAATTTAAAAGAAG TERM 2525 1951191 - 1951230 + F 100 -16.2 -2.70525 | opp_overlap 1951190 1951189 1951198, overlap 1951183 1951195 TATTATTGAGGAATC TGAATTACCTCTTTTTAT TATA ATAAAAAGAGGTAATTTA ATTAATTTAAAAGAA TERM 2526 1951195 - 1951226 + F 100 -14.8 -4.04394 | opp_overlap 1951190 1951189 1951198, overlap 1951183 1951191 ATTGAGGAATCTGAA TTACCTCTTTTTAT TATA ATAAAAAGAGGTAA TTTAATTAATTTAAA TERM 2527 1951223 - 1951198 - f 87 -12.1 -2.75957 | opp_overlap 1951183 1951195 1951191, overlap 1951190 1951189 GAGGAATCTGAATTA CCTCTTTTTAT TATA ATAAAAAGAGG TAATTTAATTAATTT SAK_1956 1951499 - 1951789 + | hypothetical protein TERM 2528 1951819 - 1951840 + F 100 -10.9 -4.84274 | opp_overlap 1951816, overlap 1951816 1951792 TTCATAAGTATAGCT TAGGAGGGC ATAA GCCTTCCTA TTTTTGATATACTTA SAK_1957 1951890 - 1952264 + | hypothetical protein SAK_1958 1952333 - 1952458 + | hypothetical protein SAK_1959 1952530 - 1952913 + | hypothetical protein SAK_1960 1952910 - 1953014 + | hypothetical protein TERM 2529 1953150 - 1953166 + F 71 -3.1 -5.13354 | AAGTGTATAATTGAA TTAAAGT AAT ATTTTAA TTTCTTTTTTATAAA SAK_1961 1953193 - 1953537 + | hypothetical protein SAK_1962 1953613 - 1953921 + | hypothetical protein TERM 2530 1954119 - 1954141 + T 88 -9.2 -4.32651 | TTTTCGTTTCAAAGG GAGCTTGCAT ACA ATGTAGGCTC TTTTAATAAGTTGTT TERM 2531 1954392 - 1954365 - T 88 -6.5 -5.36441 | TTTTGAGATAAAAAA TAATCCTTCAA TTCTAG TTGAAGAATTA CAAAATAAGGAGTTT SAK_1963 1954893 - 1954690 - | hypothetical protein TERM 2532 1954957 - 1954994 + r 100 -13.1 -5.4505 | opp_overlap 1954960, overlap 1954960 TCTTTTAAATTAATT AAATTACCTCTTTTTAT TATA ATAAAAAGAGGTAATTC TTTTTTCTTGAAGAA TERM 2533 1954960 - 1954991 + r 100 -14.8 -4.81306 | opp_overlap 1954960, overlap 1954957 TTTAAATTAATTAAA TTACCTCTTTTTAT TATA ATAAAAAGAGGTAA TTCTTTTTTCTTGAA TERM 2534 1954991 - 1954960 - R 100 -14.8 -4.04394 | opp_overlap 1954960 1954957 TTTAAATTAATTAAA TTACCTCTTTTTAT TATA ATAAAAAGAGGTAA TTCTTTTTTCTTGAA SAK_1964 1955522 - 1955121 - | hypothetical protein TERM 2535 1955300 - 1955311 + g 74 -3 -5.28176 | ATTCATTATTTTTGC TATC ATAA GATA TTTTTTCTAACTCCC SAK_1965 1956398 - 1955676 - | hypothetical protein SAK_1966 1957019 - 1956402 - | ABC transporter, ATP-binding protein TERM 2536 1956455 - 1956477 + g 74 -9.4 -3.00017 | overlap 1956452 TATCTACTTTACGGA TTTTTTGATT ATC AATCAAAAAA TAGTTTCCCTTTAAA TERM 2537 1957584 - 1957557 - R 77 -8.6 -3.66384 | opp_overlap 1957563, overlap 1957563 AATTAAACTACATAA GAAAAAGCCTTT AAAT AAAGGCTTTTTT GCTTGATAGAAGAGG TERM 2538 1957563 - 1957578 + r 91 -7.6 -5.30155 | opp_overlap 1957557 1957563 ACTACATAAGAAAAA GCCTTT AAAT AAAGGC TTTTTTGCTTGATAG TERM 2539 1957578 - 1957563 - R 91 -7.6 -5.25699 | opp_overlap 1957563, overlap 1957557 ACTACATAAGAAAAA GCCTTT AAAT AAAGGC TTTTTTGCTTGATAG SAK_1967 1958552 - 1957698 - | aminoglycoside 6-adenylyltransferase, putative TERM 2540 1958576 - 1958587 + r 71 -3 -5.31877 | CCTCCTACTTCACTT TATG TTAC CATA TTTTTTCTAATACCT SAK_1968 1959282 - 1958731 - | hypothetical protein SAK_1969 1959712 - 1959323 - | IS1381 transposase protein B SAK_1970 1960128 - 1959745 - | IS1381 transposase protein A SAK_1971 1961027 - 1960419 - | hypothetical protein TERM 2541 1960876 - 1960886 + g 88 -5.4 -5.4433 | AAATCCATTTTTATT GACA TCT TGTC TTTTTCTTTATCTCT SAK_1972 1961349 - 1961014 - | PadR family transcriptional regulator TERM 2542 1961696 - 1961652 - R 71 -6.6 -4.11371 | opp_overlap 1961656, overlap 1961656 1961659 CAATAGTTTTTAAAA TTAATAATAGAGACTAGAGT TCATC ACTCTGGCCTCTATTATTTT TTATTCAATTTATAT TERM 2543 1961692 - 1961656 - R 95 -11.8 -3.67175 | opp_overlap 1961656, overlap 1961652 1961659 AGTTTTTAAAATTAA TAATAGAGACTAGAGT TCATC ACTCTGGCCTCTATTA TTTTTTATTCAATTT TERM 2544 1961656 - 1961692 + r 100 -11.8 -5.52096 | opp_overlap 1961656 1961652 1961659 AGTTTTTAAAATTAA TAATAGAGACTAGAGT TCATC ACTCTGGCCTCTATTA TTTTTTATTCAATTT TERM 2545 1961689 - 1961659 - R 85 -9.1 -3.965 | opp_overlap 1961656, overlap 1961656 1961652 TTTTAAAATTAATAA TAGAGACTAGAGT TCATC ACTCTGGCCTCTA TTATTTTTTATTCAA SAK_1973 1962366 - 1961878 - | acetyltransferase SAK_1974 1963296 - 1962535 - | hypothetical protein SAK_1975 1964195 - 1963293 - | ABC transporter, ATP-binding protein SAK_1976 1964398 - 1964192 - | hypothetical protein SAK_1977 1965476 - 1964400 - | DNA-binding protein TERM 2546 1964620 - 1964639 + g 73 -6.6 -4.23999 | opp_overlap 1964619 1964631 1964632, overlap 1964607 1964616 1964631 AATCTTTGGAGCAAT TGTTTTAA AGAT TTAAAACA TTGTTTTAAGTATCC TERM 2547 1965542 - 1965528 - R 72 -2.8 -5.36689 | opp_overlap 1965528, overlap 1965529 AAATCAAAAATAAAA GTTCCT ATC AGGAAA TATAATATAAAAAAG TERM 2548 1965573 - 1965557 - R 79 -3.7 -5.53436 | opp_overlap 1965557 1965569, overlap 1965569 ATATAATATAAAAAA GTTTCCC TAG AAGAAAC TTTTTCGTTGATTAA TERM 2549 1965711 - 1965663 - R 100 -14.3 -4.65895 | opp_overlap 1965666 1965670 1965680 1965682, overlap 1965646 1965666 TTTGTCATTGAAAAA TAATGAATTATAAAAGAGCCCTT AAG AAAGGCTTTTTTATAATTCATTG GTAACTACTATTTTT TERM 2550 1965666 - 1965708 + r 100 -16 -3.20207 | opp_overlap 1965663 1965666, overlap 1965670 1965680 1965682 GTCATTGAAAAATAA TGAATTATAAAAGAGCCCTT AAG AAAGGCTTTTTTATAATTCA TTGGTAACTACTATT TERM 2551 1965708 - 1965666 - R 100 -16 -4.44608 | opp_overlap 1965666 1965670 1965680 1965682, overlap 1965663 GTCATTGAAAAATAA TGAATTATAAAAGAGCCCTT AAG AAAGGCTTTTTTATAATTCA TTGGTAACTACTATT TERM 2552 1965670 - 1965704 + r 87 -11 -3.40867 | opp_overlap 1965666 1965663, overlap 1965666 1965680 1965682 TTGAAAAATAATGAA TTATAAAAGAGCCCTT AAG AAAGGCTTTTTTATAA TTCATTGGTAACTAC TERM 2553 1965680 - 1965694 + r 77 -4.2 -5.38249 | opp_overlap 1965666 1965663, overlap 1965670 1965666 1965682 ATGAATTATAAAAGA GCCCTT AAG AAAGGC TTTTTTATAATTCAT SAK_1978 1966339 - 1965725 - | PAP2 family protein TERM 2554 1966414 - 1966404 - H 80 -5.4 -5.19916 | AAAATATTTAAAAAA TGCT TAA AGCA CGCGCTAACCTTTTA SAK_1979 1966553 - 1966870 + | MagZ family protein SAK_1980 1966867 - 1967427 + | decarboxylase family protein TERM 2555 1967438 - 1967466 + F 76 -5.4 -5.00884 | opp_overlap 1967441, overlap 1967441 ACTAGATTGATAAAA AAAGGAAGTTTC TAATT GAAATTTCCTTC TTTTTTCGAAGCGAT TERM 2556 1967441 - 1967463 + F 80 -7.1 -4.61482 | opp_overlap 1967441, overlap 1967438 AGATTGATAAAAAAA GGAAGTTTC TAATT GAAATTTCC TTCTTTTTTCGAAGC TERM 2557 1967463 - 1967441 - f 85 -4.9 -5.65177 | opp_overlap 1967441 1967438 AGATTGATAAAAAAA GGAAGTTTC TAATT GAAATTTCC TTCTTTTTTCGAAGC SAK_1981 1967732 - 1968595 + | CAAX amino terminal protease family protein TERM 2558 1968614 - 1968669 + T 100 -11.7 -4.36903 | gap 1, opp_overlap 1968619, overlap 1968619 CAAGCCACAAGACAC AAAAAGTATG-GTTTTGAAAAGGA TAATCATCC TCCTTTTCAAAACACATACTTTTC TTTATGTTTACTAAA TERM 2559 1968664 - 1968619 - T 100 -13.7 -5.12474 | gap 1, opp_overlap 1968614 1968619 CACAAGACACAAAAA GTATG-GTTTTGAAAAGGATAA TCA TCCTCCTTTTCAAAACACATAC TTTTCTTTATGTTTA TERM 2560 1968619 - 1968664 + T 100 -11.6 -5.13648 | gap 1, opp_overlap 1968619, overlap 1968614 CACAAGACACAAAAA GTATG-GTTTTGAAAAGGA TAATCATCC TCCTTTTCAAAACACATAC TTTTCTTTATGTTTA SAK_1982 1969054 - 1968752 - | rhodanese-like domain-containing protein cfb 1969994 - 1969227 - | cAMP factor TERM 2561 1969655 - 1969639 - G 91 -9.5 -4.62069 | opp_overlap 1969638 TGTTGAGTTGAAAAA GTGATTG CTT CAATCAC ATCTGTTAAGGCTTC SAK_1984 1970763 - 1971302 + | topology modulation protein TERM 2562 1971463 - 1971443 - f 76 -3.3 -5.47431 | TCAAGAGACAAAAAA CTATTCACT TTT AGAAAATAG CTGTCTCTAATCGAC TERM 2563 1972056 - 1972025 - g 73 -7.3 -4.14243 | GACGGTATTTCAAAA GCCCCTGAAGTAG AACGTG CTACCTTAGAGGC TAAGACCAATAAACT SAK_1985 1971503 - 1972588 + | glycerol dehydrogenase, putative TERM 2564 1972614 - 1972655 + T 74 -9.1 -3.16564 | gap 1, opp_overlap 1972622 1972623, overlap 1972622 1972623 ACTCGATTATTCCGA T-ACAAAAATCCCTTAGA CACATCA TCTAAGGGGTTTTTGTTA TTAATAAAGTAAAAA TERM 2565 1972622 - 1972646 + T 84 -6.5 -5.31855 | opp_overlap 1972622 1972623, overlap 1972614 1972623 ATTCCGATACAAAAA TCCCTTAGA CACATCA TCTAAGGGG TTTTTGTTATTAATA TERM 2566 1972646 - 1972622 - T 80 -5.7 -4.9725 | opp_overlap 1972622 1972614 1972623, overlap 1972623 ATTCCGATACAAAAA TCCCTTAGACA CAT CATCTAAGGGG TTTTTGTTATTAATA TERM 2567 1972623 - 1972645 + T 74 -7.8 -3.77486 | opp_overlap 1972622 1972623, overlap 1972622 1972614 TTCCGATACAAAAAT CCCTTAGA CACATCA TCTAAGGG GTTTTTGTTATTAAT TERM 2568 1972645 - 1972623 - T 80 -9.2 -3.57627 | opp_overlap 1972623 1972622 1972614, overlap 1972622 TTCCGATACAAAAAT CCCTTAGACA CAT CATCTAAGGG GTTTTTGTTATTAAT SAK_1986 1973460 - 1972753 - | hypothetical protein TERM 2569 1973190 - 1973209 + g 80 -8.6 -3.93055 | opp_overlap 1973190 1973189, overlap 1973203 CTTGCTTGTTCAAAC GCTCTTCA ACGT TGAAGGGC TTCTCTTCTTCTTTC TERM 2570 1973203 - 1973217 + g 70 -6.4 -4.0031 | opp_overlap 1973190 1973189, overlap 1973190 ACGCTCTTCAACGTT GAAGGG CTT CTCTTC TTCTTTCATCAAGGT TERM 2571 1973794 - 1973828 + r 84 -3.7 -5.76633 | opp_overlap 1973798, overlap 1973798 ATAAACGACCAACTA AAAAGTAAGAAAGTT AAGAG GACTTTCTTACTTGC TTTTTTTGTATATAG TERM 2572 1973798 - 1973824 + r 85 -8.9 -4.10161 | opp_overlap 1973798, overlap 1973794 ACGACCAACTAAAAA GTAAGAAAGTT AAGAG GACTTTCTTAC TTGCTTTTTTTGTAT TERM 2573 1973824 - 1973798 - R 90 -8.2 -4.90869 | opp_overlap 1973798 1973794 ACGACCAACTAAAAA GTAAGAAAGT TAAGAGG ACTTTCTTAC TTGCTTTTTTTGTAT SAK_1987 1975651 - 1973807 - | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein metE 1977933 - 1975696 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 2574 1978266 - 1978247 - R 85 -5 -5.69068 | opp_overlap 1978247 CAAAAACACAAAAAA CGTATCTA GAAA TAGATGCG TTTTTTGTGTTTTTA TERM 2575 1978247 - 1978266 + r 100 -7.2 -5.69068 | opp_overlap 1978247 CAAAAACACAAAAAA CGTATCTA GAAA TAGATGCG TTTTTTGTGTTTTTA SAK_1989 1978626 - 1978303 - | hypothetical protein SAK_1990 1979308 - 1978616 - | azaleucine resistance protein AzlC, putative TERM 2576 1979692 - 1979702 + G 84 -3.2 -5.75945 | CCGTATCTGTACTTT TGGG AAC CCTA TTTTTTTTAGGCGGT TERM 2577 1982189 - 1982172 - g 74 -4.8 -4.84274 | opp_overlap 1982172 CAACTAGATCAAAAA GGCCAG CCTCAT CTAGCC ATTTCACCTAATGAT TERM 2578 1983958 - 1983938 - g 77 -9.8 -3.20367 | opp_overlap 1983942, overlap 1983942 TAATAACCTTATCAA GAAAGCAG AATTG CTGCTTTC CAATAGACAAGCTAC cspA 1979631 - 1984346 + | cell surface serine endopeptidase CspA TERM 2579 1984369 - 1984408 + F 80 -7.2 -4.58283 | opp_overlap 1984369 TAAAAAATAGAGCAA GGCATCAATTACTAGCTA TTAA TAGTTAGTGACGGGTGCC TTTTTGAGGAGCTTA TERM 2580 1984973 - 1984959 - g 76 -5 -4.97312 | opp_overlap 1984959 AAAAGCAATCAAAAA TGACAC TCA GTATCA GTTCCTAGATTTAAC SAK_1992 1984579 - 1985265 + | DNA-binding response regulator SAK_1993 1985262 - 1986650 + | sensor histidine kinase SAK_1994 1986743 - 1987351 + | hypothetical protein TERM 2581 1987372 - 1987397 + T 100 -13.5 -4.38712 | opp_overlap 1987372 CTAAAAATAGAAAAA TCCCAAAAGTT CATA AACTTTTGGGA TTTTATACGCGTAAA TERM 2582 1987397 - 1987372 - T 100 -13.5 -5.36364 | opp_overlap 1987372 CTAAAAATAGAAAAA TCCCAAAAGTT CATA AACTTTTGGGA TTTTATACGCGTAAA leuS 1989942 - 1987441 - | leucyl-tRNA synthetase TERM 2583 1989891 - 1989912 + g 73 -8.7 -3.43414 | AAGTATGATTATCTG CCCAAAAGG CTTG CCATTTGGG TTCGATTTCTTTGTG TERM 2584 1990182 - 1990201 + H 87 -4.3 -5.80951 | opp_overlap 1990182 CGAGCGTTTATAGAA CTCAAGG GTAGCA TCTTGAG TTTTTTCTTTTACAT SAK_1996 1990319 - 1991566 + | major facilitator family protein TERM 2585 1991607 - 1991572 - T 86 -11.4 -2.65112 | opp_overlap 1991572 1991577, overlap 1991577 AACTGACTGATATTA CAAAACAGTATTCCTC AATT GAGAAATACTGTTTTC TTTATTTCATTAGAT TERM 2586 1991572 - 1991607 + T 90 -9.2 -4.57304 | opp_overlap 1991572 1991577, overlap 1991577 AACTGACTGATATTA CAAAACAGTATTCCTC AATT GAGAAATACTGTTTTC TTTATTTCATTAGAT TERM 2587 1991577 - 1991602 + T 95 -9.1 -5.20222 | opp_overlap 1991572 1991577, overlap 1991572 ACTGATATTACAAAA CAGTATTCCTC AATT GAGAAATACTG TTTTCTTTATTTCAT TERM 2588 1991602 - 1991577 - T 100 -11.3 -4.51378 | opp_overlap 1991577 1991572, overlap 1991572 ACTGATATTACAAAA CAGTATTCCTC AATT GAGAAATACTG TTTTCTTTATTTCAT SAK_1997 1992418 - 1991609 - | hypothetical protein TERM 2589 1992129 - 1992139 + g 74 -4 -5.12617 | opp_overlap 1992129 GCAACTGCGTAAAAA TCAA TAC TTGA TTTTTTAAATGCTTC TERM 2590 1992582 - 1992555 - R 74 -5.6 -4.87291 | CATGTTAACTAAAAA GCCATGATAAAC AACC GTCTAACATAGC CTTTTTGTTTTATAA nusG 1993131 - 1992592 - | transcription antitermination protein NusG TERM 2591 1993288 - 1993265 - H 81 -3.8 -5.67283 | AATTCAAATAAAAAA GGCAAAGTTC TGAT GAGGTTTGCC TTAAGATTTTGAAAG SAK_2000 1995055 - 1995438 + | IS1381 transposase protein A SAK_2001 1995471 - 1995860 + | IS1381 transposase protein B SAK_2002 1996456 - 1995857 - | pathogenicity protein, putative, interuption N-terminus TERM 2592 1996501 - 1996486 - R 76 -6.2 -4.67755 | ATAGTTAGTTAAAAA TCCTAA TTTA TTAGGA TAGGACCACGTTTAT TERM 2593 1996599 - 1996626 + r 83 -4.4 -5.52384 | overlap 1996597 AATTTATTTACATTT TATTAAAATAAA TATT TTTTTTTTAATA TTTTTTTGCTCAACA TERM 2594 1996735 - 1996716 - R 100 -7.9 -5.36441 | opp_overlap 1996716 TTTCCACACAAAAAA CCCTTAG TAAAAT CTAAGGG TTTGGGTTGTTTCTA TERM 2595 1996716 - 1996735 + r 74 -7.9 -3.91042 | opp_overlap 1996716 TTTCCACACAAAAAA CCCTTAG TAAAAT CTAAGGG TTTGGGTTGTTTCTA secE 1996941 - 1996768 - | preprotein translocase subunit SecE pbp2A 1999499 - 1997178 - | penicillin-binding protein 2A TERM 2596 1999506 - 1999470 - G 88 -10.5 -3.92324 | opp_overlap 1999470 1999473, overlap 1999473 TTCGTCAACACGAAA TAAGTCTATAAACTTAT CAA ATAATTTCATAGACTTA TTATATCAATTTTCA TERM 2597 1999470 - 1999506 + g 72 -8.3 -3.59984 | opp_overlap 1999470 1999473, overlap 1999473 TTCGTCAACACGAAA TAAGTCTATAAACTTAT CAA ATAATTTCATAGACTTA TTATATCAATTTTCA TERM 2598 1999503 - 1999473 - G 76 -7.8 -4.08853 | opp_overlap 1999473 1999470, overlap 1999470 GTCAACACGAAATAA GTCTATAAACTTAT CAA ATAATTTCATAGAC TTATTATATCAATTT TERM 2599 1999941 - 1999951 + G 70 -3.2 -4.93877 | ACTAGATATGGAGAC CAGT GGA GCTG TTTTATTTGCTAAAA SAK_2006 1999543 - 2000427 + | ribosomal large subunit pseudouridine synthase A TERM 2600 2000416 - 2000442 + T 100 -16.8 -4.39133 | opp_overlap 2000416 AACAATTATAAAAAA GGAGTTGGATAA TAA TTATCCAACTCC TTTTAATCATTATTG TERM 2601 2000442 - 2000416 - T 100 -16.8 -5.4111 | opp_overlap 2000416 AACAATTATAAAAAA GGAGTTGGATAA TAA TTATCCAACTCC TTTTAATCATTATTG SAK_2007 2002092 - 2000452 - | hypothetical protein TERM 2602 2002018 - 2002006 - G 78 -4.1 -5.26119 | CTTTGAAAAATAAAA GAATC CTA GACTC AGAAGTGATACTAAA TERM 2603 2002241 - 2002214 - R 74 -2.1 -5.52347 | gap 1, overlap 2002215 AACAAAACGAAAAAA GGATTGAAACCA TAATC CGATTTCAA-CC TCTAAAATTTTTGTC deoB 2003473 - 2002262 - | phosphopentomutase deoC 2004211 - 2003540 - | deoxyribose-phosphate aldolase SAK_2010 2005443 - 2004241 - | concentrative nucleoside transporter (CNT) family protein udp 2006243 - 2005464 - | uridine phosphorylase SAK_2012 2006402 - 2007139 + | GntR family transcriptional regulator TERM 2604 2007487 - 2007541 + T 100 -29.2 -3.27298 | opp_overlap 2007497 2007504, overlap 2007488 2007491 2007497 2007504 GACTATCATATCTCT ATTATCACAACATAAAACTCCCCTTT AAC AAAGGGGAGTTTTATGTTGTGATAAG TTAGTGATTAGAAGC TERM 2605 2007488 - 2007540 + T 100 -32.7 -2.56164 | opp_overlap 2007497 2007504, overlap 2007487 2007491 2007497 2007504 ACTATCATATCTCTA TTATCACAACATAAAACTCCCCTTT AAC AAAGGGGAGTTTTATGTTGTGATAA GTTAGTGATTAGAAG TERM 2606 2007491 - 2007537 + T 100 -30 -2.58767 | opp_overlap 2007497 2007504, overlap 2007488 2007487 2007497 2007504 ATCATATCTCTATTA TCACAACATAAAACTCCCCTTT AAC AAAGGGGAGTTTTATGTTGTGA TAAGTTAGTGATTAG TERM 2607 2007497 - 2007531 + T 100 -21.8 -3.44586 | opp_overlap 2007497 2007504, overlap 2007491 2007488 2007487 2007504 TCTCTATTATCACAA CATAAAACTCCCCTTT AAC AAAGGGGAGTTTTATG TTGTGATAAGTTAGT TERM 2608 2007531 - 2007497 - T 100 -21.8 -3.44051 | opp_overlap 2007491 2007488 2007487 2007497 2007504, overlap 2007504 TCTCTATTATCACAA CATAAAACTCCCCTTT AAC AAAGGGGAGTTTTATG TTGTGATAAGTTAGT TERM 2609 2007524 - 2007504 - T 100 -14.1 -4.75289 | opp_overlap 2007497 2007491 2007488 2007487 2007504, overlap 2007497 TATCACAACATAAAA CTCCCCTTT AAC AAAGGGGAG TTTTATGTTGTGATA TERM 2610 2007504 - 2007524 + T 100 -14.1 -4.75289 | opp_overlap 2007504 2007497, overlap 2007497 2007491 2007488 2007487 TATCACAACATAAAA CTCCCCTTT AAC AAAGGGGAG TTTTATGTTGTGATA groEL 2009171 - 2007549 - | chaperonin GroEL TERM 2611 2007995 - 2007981 - G 76 -10 -3.05463 | opp_overlap 2007986, overlap 2007985 ACGCGTTGCATTTAA CGCATC TTC GATGCG AAGTTTCATCTCTTT TERM 2612 2007986 - 2007998 + g 76 -7.7 -4.00589 | opp_overlap 2007981 2007985 TTGCATTTAACGCAT CTTCG ATG CGAAG TTTCATCTCTTTTAA TERM 2613 2008210 - 2008184 - G 70 -8.2 -3.30124 | opp_overlap 2008184 2008183 2008187, overlap 2008187 CGGCACCTTCGACAA TAACAGTAGA ATCTTTA TCTACTGTTA CTTTAGCAGACTGTC groES 2009551 - 2009267 - | co-chaperonin GroES SAK_2015 2010529 - 2009726 - | ABC transporter, ATP-binding protein SAK_2016 2011430 - 2010534 - | ABC transporter, permease protein SAK_2017 2012408 - 2011446 - | ABC transporter, substrate-binding protein TERM 2614 2012478 - 2012454 - R 100 -9.4 -5.86976 | opp_overlap 2012450 2012454 CCATAAAACAAAAAA CCAACTAGAC CCTAC ATCTAGTTGG TTAATTATTTCTCTC TERM 2615 2012454 - 2012478 + r 77 -8.7 -3.67305 | opp_overlap 2012454, overlap 2012450 CCATAAAACAAAAAA CCAACTAGA CCCTACA TCTAGTTGG TTAATTATTTCTCTC TERM 2616 2012615 - 2012644 + r 100 -13.7 -2.87344 | opp_overlap 2012585 2012607, overlap 2012601 2012617 ATACAAACTTTGCGT GACGTTTGTATCC TTGA GGCTACAAACGTC TATCTAAAGAAACTA TERM 2617 2012617 - 2012642 + r 83 -10.5 -2.98823 | opp_overlap 2012585 2012607, overlap 2012601 2012615 ACAAACTTTGCGTGA CGTTTGTATCC TTGA GGCTACAAACG TCTATCTAAAGAAAC SAK_2018 2013670 - 2012873 - | Cof-like hydrolase family protein TERM 2618 2013088 - 2013069 - G 72 -9.4 -2.68471 | opp_overlap 2013069, overlap 2013068 2013066 GAAATATCTAAATAG TCTGCTAA AGTT TTAGCAGA TTTTCCTTTTTCAAT TERM 2619 2013069 - 2013088 + g 100 -9.4 -4.78661 | opp_overlap 2013069 2013068 2013066 GAAATATCTAAATAG TCTGCTAA AGTT TTAGCAGA TTTTCCTTTTTCAAT TERM 2620 2013577 - 2013561 - G 80 -8.7 -3.92625 | opp_overlap 2013561 2013559 2013556 GATATGGGAACGAAA GTAGCCC CTT GAGCTAC TATTTGTTTAATTCC SAK_2019 2013856 - 2014716 + | glyoxalase family protein SAK_2020 2014759 - 2015490 + | hypothetical protein TERM 2621 2015548 - 2015525 - T 100 -12.6 -4.99035 | opp_overlap 2015525 TTATTCACACAAAAA GCAAGAGATA ATCG TATCTCTTGC TTTTTGACAAACTTG TERM 2622 2015525 - 2015548 + T 100 -12.6 -4.58283 | opp_overlap 2015525 TTATTCACACAAAAA GCAAGAGATA ATCG TATCTCTTGC TTTTTGACAAACTTG TERM 2623 2015645 - 2015619 - T 74 -5.2 -4.82661 | opp_overlap 2015619, overlap 2015621 2015643 ATTAACAAAAAATAA TTGTTATCAACA ACT TGTGGATAACTA TGGGGATAGACAGAG nrdG 2016464 - 2015847 - | anaerobic ribonucleoside-triphosphate reductase activating protein SAK_2022 2017028 - 2016537 - | acetyltransferase SAK_2023 2017969 - 2017037 - | Gfo/Idh/MocA family oxidoreductase SAK_2024 2018125 - 2017982 - | hypothetical protein nrdD 2020371 - 2018200 - | anaerobic ribonucleoside triphosphate reductase TERM 2624 2020487 - 2020444 - R 100 -10 -6.23545 | gap 1, opp_overlap 2020444 2020486 TGCAAAGAAAAAAAA TCAATATATTGTGTC-AAG TTTTTTG CTCAGACACAATATATTGA TTTTTAATCTATTTG TERM 2625 2020444 - 2020487 + r 93 -8.5 -4.90217 | gap 1, opp_overlap 2020444, overlap 2020486 TGCAAAGAAAAAAAA TCAATATATTGTGTC-AAGT TTTTT GCTCAGACACAATATATTGA TTTTTAATCTATTTG SAK_2026 2021983 - 2020496 - | hypothetical protein SAK_2027 2022205 - 2022083 - | hypothetical protein TERM 2626 2022279 - 2022258 - R 100 -7.3 -6.3578 | ATTCGAAAAAAAAAA CGACTGAAC AATT GCTCAATCG CTTCAATATTATTCT SAK_2028 2022605 - 2022288 - | hypothetical protein TERM 2627 2022363 - 2022379 + g 79 -10.9 -3.07575 | ATCTTCTGGTATAGG CTGAAGG TCT CCTTCAG TTCCATCGGCATTTT SAK_2029 2023041 - 2022631 - | Holliday junction resolvase-like protein SAK_2030 2023316 - 2023050 - | hypothetical protein TERM 2628 2023458 - 2023413 - R 100 -9.4 -5.1417 | opp_overlap 2023413 2023427 2023457 TTAGAAAATCAAAAA GGGAGCACAAGAAACC-AAGAA GTGA TTCTTTGATTTCTT-TACTCCC TACCTTATAGGTGAT spxA 2023916 - 2023518 - | transcriptional regulator Spx TERM 2629 2024088 - 2024063 - R 87 -7.7 -4.91109 | opp_overlap 2024063 TTTTTAGTATAAAAA TAAGTTCCAAC CACT GTCAGAACTTA TTTTAGTTACATTTA recA 2025154 - 2024132 - | recombinase A cinA 2026604 - 2025345 - | competence damage-inducible protein A TERM 2630 2026671 - 2026656 - R 100 -7.6 -5.52986 | overlap 2026637 ATTTTAGCAAAAAAA GTAGCA AAAG TGCTAC TTAAAACATATCACA tag 2027244 - 2026693 - | DNA-3-methyladenine glycosylase I ruvA 2027857 - 2027267 - | Holliday junction DNA helicase motor protein TERM 2631 2027698 - 2027686 - G 73 -3.4 -5.08483 | GAAAACCAAATAAAA GATG TGCAT CATC GCGAATGACTTGATG SAK_2036 2029091 - 2027859 - | major facilitator family transporter mutL 2031096 - 2029123 - | DNA mismatch repair protein TERM 2632 2029435 - 2029449 + g 71 -8.6 -3.18274 | TACCTCTTCTTCTTT CATCCA AAT TGGATG TTCCCTTAAAATGAA TERM 2633 2029744 - 2029723 - G 73 -3.1 -5.15634 | gap 1 CATTTGACCAAAAAA TTCGAGCTCT GGA AAAG-TCGAA CTTTCTTCCGAATCT SAK_2038 2031328 - 2031227 - | hypothetical protein SAK_2039 2031322 - 2031525 + | cold shock protein TERM 2634 2031558 - 2031534 - TR 86 -5.8 -5.4148 | opp_overlap 2031534 TAAATAATTAAAAAA GAGCCTAAAT GAATT ATTTAGTCTC TTTTTTGTTGCCCAA TERM 2635 2031534 - 2031558 + Tr 88 -6.5 -5.4505 | opp_overlap 2031534 TAAATAATTAAAAAA GAGCCTAAATG AAT TATTTAGTCTC TTTTTTGTTGCCCAA hexA 2034158 - 2031582 - | DNA mismatch repair protein TERM 2636 2031961 - 2031977 + g 74 -8.1 -3.65522 | GTAGCCACGTGTACA TTGACAA GCC TTGTCAA TTGTTCAGATAAATC TERM 2637 2033223 - 2033203 - G 74 -2.6 -5.40072 | overlap 2033206 TTTCTCTCAAAAAAA TAATCAAG AAACA CTTGAATA ATATCTTGACGTTCC TERM 2638 2033220 - 2033206 - G 71 -4.3 -4.79949 | overlap 2033203 CTCTCAAAAAAATAA TCAAG AAACA CTTGA ATAATATCTTGACGT TERM 2639 2033582 - 2033604 + g 88 -4.9 -5.53991 | ATGATAAAAGCAAGT TCATCTGCT TCGTC AGTAGGTGA TTTTTTTCGTCCGTC TERM 2640 2034123 - 2034091 - G 84 -4.3 -5.54079 | opp_overlap 2034091 2034094 CTAAAAAGCAAAAAA GCATCTGGATA ATTCTCTTTTA TATCCAGATAC TGTTGCATTCCCGGT argR 2034652 - 2034215 - | arginine repressor TERM 2641 2034934 - 2034913 - g 78 -5.9 -4.81851 | overlap 2034914 AGTGAAATTCAAAAA GTTGTTCCA GATA TGGAACAAT CGACCATTCTTTCTT TERM 2642 2034933 - 2034914 - g 78 -9.4 -3.48026 | overlap 2034913 GTGAAATTCAAAAAG TTGTTCCA GATA TGGAACAA TCGACCATTCTTTCT argS 2034874 - 2036565 + | arginyl-tRNA synthetase TERM 2643 2036578 - 2036607 + F 100 -8 -5.5208 | opp_overlap 2036578 2036582, overlap 2036579 2036582 TAAGAAATGACACTA CTAAGACTGTCA AATTTA TGACAGTCTTAA TTTTTTATATTATAA TERM 2644 2036607 - 2036578 - f 77 -10.2 -2.75669 | opp_overlap 2036578 2036579 2036582, overlap 2036582 TAAGAAATGACACTA CTAAGACTGTCA AATTTA TGACAGTCTTAA TTTTTTATATTATAA TERM 2645 2036579 - 2036606 + F 95 -11.5 -3.89621 | opp_overlap 2036578 2036582, overlap 2036578 2036582 AAGAAATGACACTAC TAAGACTGTCA AATTTA TGACAGTCTTA ATTTTTTATATTATA TERM 2646 2036582 - 2036603 + F 82 -8.8 -4.03002 | opp_overlap 2036578 2036582, overlap 2036579 2036578 AAATGACACTACTAA GACTGTCA AATTTA TGACAGTC TTAATTTTTTATATT TERM 2647 2036603 - 2036582 - f 74 -8.8 -3.26834 | opp_overlap 2036582 2036579 2036578, overlap 2036578 AAATGACACTACTAA GACTGTCA AATTTA TGACAGTC TTAATTTTTTATATT SAK_2043 2036653 - 2036961 + | hypothetical protein TERM 2648 2036959 - 2036990 + T 100 -13.3 -4.04811 | opp_overlap 2036965, overlap 2036965 AGTGGAGGACCAAAA TAAAAATACAGGC CAGACA GCCTGTATTTTTA TTTATCGTAATTTCT TERM 2649 2036984 - 2036965 - T 100 -8.6 -5.50723 | opp_overlap 2036959 2036965 GGACCAAAATAAAAA TACAGGCC AGAC AGCCTGTA TTTTTATTTATCGTA TERM 2650 2036965 - 2036984 + T 100 -7.9 -5.40464 | opp_overlap 2036965, overlap 2036959 GGACCAAAATAAAAA TACAGGC CAGACA GCCTGTA TTTTTATTTATCGTA SAK_2044 2037860 - 2036988 - | hypothetical protein TERM 2651 2037912 - 2037888 - R 85 -6.6 -5.08824 | gap 1, opp_overlap 2037888 2037894 TCCTTATTCAAAAAA GCTAAAGTTGT TTAA ACAACTT-AGC TTAATAACATCATAA SAK_2045 2038912 - 2037968 - | hypothetical protein TERM 2652 2038677 - 2038664 - G 73 -3.1 -5.09259 | opp_overlap 2038645 2038643, overlap 2038645 2038665 TATTTCAAAAGAAAA CCAGT GTTT ACTGA CAGCTGAAATAACCT aspS 2040653 - 2038902 - | aspartyl-tRNA synthetase TERM 2653 2040566 - 2040554 - G 84 -7.7 -4.66002 | GATCAATAAAAATAA GACCT CCA AGGTC ACGACGACGACCAAC TERM 2654 2040741 - 2040701 - R 79 -4.8 -5.22006 | gap 1, overlap 2040704 CTATTATAACAAAAA GCACCTAAAAACCCCACCC ATTA AGG-AGAGTTTTTAGGAAC TGTTTTACAATCCTA hisS 2042026 - 2040746 - | histidyl-tRNA synthetase TERM 2655 2041170 - 2041157 - G 70 -8.1 -3.34401 | AAAATAGGATACTAA GCCGT CATA ACGGC CTCCAGCACAGATCG TERM 2656 2042180 - 2042151 - H 79 -3.7 -5.61881 | opp_overlap 2042156, overlap 2042152 TTGTAAAAATAAAAA GTTTTGTCAAGTA ACTT TACTTTACAAAAA AGATATGTTATCATA TERM 2657 2042179 - 2042152 - H 72 -7.2 -3.95502 | opp_overlap 2042156, overlap 2042151 TGTAAAAATAAAAAG TTTTGTCAAGTA ACTT TACTTTACAAAA AAGATATGTTATCAT TERM 2658 2042192 - 2042182 - H 74 -4 -5.26316 | overlap 2042184 TTACTTTACAAAAAA GATA TGT TATC ATAGTGAAGTTGATG rpmF 2042246 - 2042428 + | 50S ribosomal protein L32 rpmG 2042444 - 2042593 + | 50S ribosomal protein L33 SAK_2050 2043970 - 2042762 - | IS10R, transposase TERM 2659 2044110 - 2044084 - H 100 -13 -3.14647 | opp_overlap 2044084 ATTCATCAGAGTTAA GCCCTGCTATCA TTT CGATGGCAGGGC TTTTTAATATTTGGT TERM 2660 2044084 - 2044110 + H 100 -14.5 -4.946 | opp_overlap 2044084 ATTCATCAGAGTTAA GCCCTGCTATC ATTTC GATGGCAGGGC TTTTTAATATTTGGT cadD 2044224 - 2044838 + | cadmium resistance protein CadD cadX 2044850 - 2045188 + | cadmium resistance accessory protein CadX SAK_2053 2045239 - 2046654 + | hypothetical protein TERM 2661 2046676 - 2046656 - f 80 -9.7 -3.53343 | opp_overlap 2046656 AATTTGCTCTTTAAA GACTAGGTG AAT CGCCTAGTC TTTTTTTGCGTCTCG TERM 2662 2046656 - 2046676 + F 100 -11.9 -5.50499 | opp_overlap 2046656 AATTTGCTCTTTAAA GACTAGGTG AAT CGCCTAGTC TTTTTTTGCGTCTCG TERM 2663 2046785 - 2046761 - f 76 -9.5 -3.1247 | opp_overlap 2046761 2046760 2046763 ACTCCTTATACTGAA TATATCAAGAA AAA CTCTTGATATA AATTTTAATAGTCCA SAK_2054 2046975 - 2047424 + | hypothetical protein TERM 2664 2047434 - 2047454 + F 100 -9.7 -5.24129 | opp_overlap 2047434 CGCTAATTCCTCAAA TCCAGTGTC TCT GTCACTGGA TTTTTTGTAAAAAAA TERM 2665 2047454 - 2047434 - f 82 -9.7 -3.57561 | opp_overlap 2047434 CGCTAATTCCTCAAA TCCAGTGTC TCT GTCACTGGA TTTTTTGTAAAAAAA TERM 2666 2047658 - 2047646 - g 71 -4.8 -4.67038 | opp_overlap 2047646 CGTTTAAAATGAAAA CCAC AAAAG GTGG TTATACAACTACATT SAK_2055 2047627 - 2047833 + | hypothetical protein TERM 2667 2048001 - 2048030 + G 72 -7.9 -3.72576 | gap 1, overlap 2048001 CCTGCAATCTTACCT G-CTCCAGAGCC TAAACAT GGCTCTGGGGGC TTTAATGCAGGGAGA SAK_2056 2047948 - 2049048 + | FtsK/SpoIIIE family protein SAK_2057 2049045 - 2049650 + | hypothetical protein TERM 2668 2049657 - 2049695 + F 80 -5.3 -5.25799 | gap 2 AAACGTTAATCCCTT GGGGCTG--TGGCTTGCGT TAA GCAAAAGCCAGACAGCCCC TTTTTATATTCTTTT SAK_2058 2049856 - 2050461 + | plasmid replication protein SAK_2059 2050792 - 2052057 + | phage integrase family site specific recombinase TERM 2669 2052169 - 2052142 - f 78 -6.6 -4.46775 | gap 1, opp_overlap 2052142 CAGCTAAAATAGAAA TTATTTAACTCTC ACT GA-AGTTAAATAA TTGAATATAAAAAAG TERM 2670 2052208 - 2052184 - f 71 -2.2 -5.48063 | gap 1, opp_overlap 2052184 ATTGAATATAAAAAA GCCTATGAAAT CAAT ATTTC-TGGGC TTTTTATTTTTAAAA TERM 2671 2052184 - 2052208 + F 83 -4.4 -5.61881 | gap 1, opp_overlap 2052184 ATTGAATATAAAAAA GCCTATGAAAT CAAT ATTTC-TGGGC TTTTTATTTTTAAAA TERM 2672 2052741 - 2052731 - g 70 -6.8 -4.04326 | opp_overlap 2052731 GAATTAAATACCAAA GGTG ATA CACC TTTTTATGAAATCAA TERM 2673 2052731 - 2052741 + G 80 -6.8 -4.85599 | opp_overlap 2052731 GAATTAAATACCAAA GGTG ATA CACC TTTTTATGAAATCAA SAK_2060 2052557 - 2053087 + | peptidase propeptide/YPEB domain-containing protein TERM 2674 2053255 - 2053238 - g 74 -4.1 -5.08011 | overlap 2053239 AAAACTTTTAAAAAA GCAACAC TACA GTGTTGA CAGTGCTTCAAATGG TERM 2675 2053824 - 2053810 - g 90 -7.2 -5.15167 | opp_overlap 2053809 GATCACTAATAAAAA CTAAAC GAG GTTTAG GATATGTTATTCCAA SAK_2061 2053173 - 2053844 + | DNA-binding response regulator TERM 2676 2053998 - 2053986 - g 88 -4.9 -5.49809 | CAAATCTGAAAAAAA TTTAG AAG CTAAA GCTGTGCAAATGAGT SAK_2062 2053828 - 2055192 + | sensor histidine kinase TERM 2677 2055242 - 2055198 - T 93 -11.1 -4.15197 | opp_overlap 2055211, overlap 2055199 2055211 GAAAGACTAGAGAAA GGAAATAAAAAAACGATAGAT TAC ACCTATCGTTTTTTTATTTAA CTTAAACTCAATTTA TERM 2678 2055241 - 2055199 - T 100 -14.6 -3.08034 | opp_overlap 2055211, overlap 2055198 2055211 AAAGACTAGAGAAAG GAAATAAAAAAACGATAGAT TAC ACCTATCGTTTTTTTATTTA ACTTAAACTCAATTT TERM 2679 2055211 - 2055229 + T 100 -6 -5.96894 | opp_overlap 2055199 2055198 2055211 AAGGAAATAAAAAAA CGATAGAT TAC ACCTATCG TTTTTTTATTTAACT TERM 2680 2055229 - 2055211 - T 100 -8.2 -6.01187 | opp_overlap 2055211, overlap 2055199 2055198 AAGGAAATAAAAAAA CGATAGAT TAC ACCTATCG TTTTTTTATTTAACT SAK_2063 2056853 - 2055300 - | hypothetical protein arcC 2057873 - 2056947 - | carbamate kinase argF 2058883 - 2057885 - | ornithine carbamoyltransferase SAK_2066 2058986 - 2060281 + | sensor histidine kinase, putative SAK_2067 2060278 - 2061111 + | response regulator TERM 2681 2061178 - 2061206 + F 100 -12.6 -4.95876 | opp_overlap 2061182, overlap 2061182 TTCATAAATCTCCAA CAAACACCTTGT CTACC GCAAGGTGTTTG TTTTTGCTTCTAGTT TERM 2682 2061182 - 2061202 + F 89 -7.6 -4.98128 | opp_overlap 2061182, overlap 2061178 TAAATCTCCAACAAA CACCTTGT CTACC GCAAGGTG TTTGTTTTTGCTTCT TERM 2683 2061202 - 2061182 - f 74 -6.9 -4.19371 | opp_overlap 2061182 2061178 TAAATCTCCAACAAA CACCTTG TCTACCG CAAGGTG TTTGTTTTTGCTTCT TERM 2684 2061680 - 2061669 - g 90 -3.6 -5.86061 | GGTGACCAAAAAAAA GCCG CTAG CGAC CTTCTTGATAAGGTG SAK_2068 2061333 - 2062055 + | glycine betaine/carnitine/choline ABC transporter, ATP-binding protein TERM 2685 2062397 - 2062407 + G 70 -6.8 -4.13767 | GCTAATCTCATTGAG GCAG CAA CTGC TTTTGGAATGACACG SAK_2069 2062058 - 2063572 + | glycine betaine/carnitine/choline ABC transporter, permease/substrate-binding protein TERM 2686 2063639 - 2063598 - T 100 -13.3 -2.85574 | opp_overlap 2063608, overlap 2063608 TCAATGGTATTAAAT GATTTAAAAAGAGCATGTC GCAT GACATGCTCTTTTTAATTG CCAAATAAAGCTTAT TERM 2687 2063608 - 2063629 + T 100 -13.1 -4.8622 | opp_overlap 2063598 2063608 TAAATGATTTAAAAA GAGCATGTC GCAT GACATGCTC TTTTTAATTGCCAAA TERM 2688 2063629 - 2063608 - T 100 -13.1 -4.72386 | opp_overlap 2063608, overlap 2063598 TAAATGATTTAAAAA GAGCATGTC GCAT GACATGCTC TTTTTAATTGCCAAA SAK_2070 2066191 - 2063651 - | hypothetical protein SAK_2071 2066918 - 2066175 - | hypothetical protein TERM 2689 2067042 - 2067020 - R 95 -10.6 -4.33708 | AAATGATTACTAAAA GCCGTTCAAC TAA ATCGAACGGC TAAGTAGTATTAAAA SAK_2072 2067408 - 2067052 - | hypothetical protein TERM 2690 2067505 - 2067479 - R 70 -8.2 -3.15249 | GATACTTTCTATTAA TCTTCTTGTTTA CGA TAAATAAGAAGA GCAAGTATCATCGAT SAK_2073 2069793 - 2067475 - | hypothetical protein TERM 2691 2068452 - 2068464 + g 70 -3.3 -4.89729 | opp_overlap 2068444 GATATAACTGCTTAG TAGCC GTT GGCAA TTTTTGAATTTTATC TERM 2692 2069808 - 2069822 + H 85 -5 -5.52986 | TTTTTTCTCCTATTT TGGACA TAT TGTTCA TTTTTTTGATAAAAT TERM 2693 2069865 - 2069880 + H 76 -6.2 -4.59109 | GATGATAGATAATTT CAAGAT AAAA ATCTTG TTTTTGGACACTGTG TERM 2694 2070038 - 2070065 + G 70 -3.4 -4.94902 | opp_overlap 2070038 CAACGATTAATCTAA CTAAAACAGCTG GAAT CAGTCGTTCTAG TTTTTATACTCATTA SAK_2074 2069932 - 2070471 + | prophage Sa05, transcriptional regulator, putative SAK_2075 2070790 - 2070494 - | hypothetical protein TERM 2695 2071010 - 2070996 - R 100 -8.6 -5.60689 | opp_overlap 2070996 GTATATAACAAAAAA GCCTAT CAA ATAGGC TTTTAAAGTATGTAA TERM 2696 2070996 - 2071010 + r 87 -8.6 -4.18401 | opp_overlap 2070996 GTATATAACAAAAAA GCCTAT CAA ATAGGC TTTTAAAGTATGTAA TERM 2697 2071230 - 2071247 + r 87 -5.5 -5.67063 | opp_overlap 2071230 GTAGGCAAGAAAAAG GGCACCT TGAT GGGTGTC TTTTTTTATGCTAAA SAK_2076 2071876 - 2071253 - | hypothetical protein SAK_2077 2072372 - 2071866 - | hypothetical protein TERM 2698 2072044 - 2072069 + g 74 -4.9 -4.77047 | opp_overlap 2072044 ATAAAATCTCTAACA TTTTTTAATTC TGGC GTATTAAAAAA TTTGTTTATATTTTC TERM 2699 2072432 - 2072407 - R 75 -4.7 -5.03994 | opp_overlap 2072407 TTTTACATATAAAAA CACAAGTTTCA CAAC TGTCACTTGTG TTAATTCCAAATCTA SAK_2078 2072756 - 2072646 - | hypothetical protein SAK_2079 2073252 - 2072866 - | prophage Sa05, ArpU family transcriptional regulator SAK_2080 2073589 - 2073227 - | hypothetical protein TERM 2700 2073634 - 2073664 + r 80 -9.1 -3.70401 | opp_overlap 2073640, overlap 2073640 AAGCTTAAATTTAAC CAAGGAGACGTTC TGTGT GAGCGTCTTTTTG TGTTTCTCGTTTTGT TERM 2701 2073640 - 2073658 + r 88 -6.7 -5.24799 | opp_overlap 2073640, overlap 2073634 AAATTTAACCAAGGA GACGTTC TGTGT GAGCGTC TTTTTGTGTTTCTCG TERM 2702 2073784 - 2073798 + r 72 -5.8 -4.371 | GTCAGATAGAAGTTC TAAAAC CAT GTTTTA TTTTAGTCTGATAAA SAK_2081 2074477 - 2073989 - | hypothetical protein TERM 2703 2074524 - 2074549 + r 74 -6.1 -4.42062 | opp_overlap 2074530, overlap 2074530 CTATTGATAAAACGA CAAAAAGAGGG AAAA CCCTCTGATTG TTTATTTAACGACTA TERM 2704 2074530 - 2074543 + r 70 -8.1 -3.14462 | opp_overlap 2074530, overlap 2074524 ATAAAACGACAAAAA GAGGG AAAA CCCTC TGATTGTTTATTTAA TERM 2705 2074543 - 2074530 - R 91 -8.1 -5.10601 | opp_overlap 2074530 2074524 ATAAAACGACAAAAA GAGGG AAAA CCCTC TGATTGTTTATTTAA SAK_2082 2075096 - 2074551 - | hypothetical protein SAK_2083 2076903 - 2075461 - | prophage Sa05, P4 family DNA primase SAK_2084 2077840 - 2076983 - | prophage Sa05, DNA replication protein, putative SAK_2085 2078445 - 2078116 - | hypothetical protein SAK_2086 2078980 - 2078648 - | hypothetical protein SAK_2087 2079638 - 2079069 - | hypothetical protein TERM 2706 2079103 - 2079125 + g 81 -5.5 -5.20333 | opp_overlap 2079103, overlap 2079104 AATTCTGCGAATAAC TCGCTAGGG ATACG CTCTAGCGC TTTTTGTTGTAAGTG TERM 2707 2079104 - 2079124 + g 78 -9 -3.71115 | opp_overlap 2079103, overlap 2079103 ATTCTGCGAATAACT CGCTAGGG ATACG CTCTAGCG CTTTTTGTTGTAAGT TERM 2708 2079574 - 2079529 - G 70 -3.5 -5.00895 | gap 1 TTGAGCACACAAAAA GCGCACTCCCTTTCTATGAA TTTTAGG TTCACA-AAATAGAGTACGC ATGATATACTATTTA TERM 2709 2079615 - 2079657 + g 100 -9.4 -5.93252 | gap 1 TTGTGGGTGCTGGGA GTTCCTAACGTG-TACGGT CGCCAA ACTATACCACGTTAGGAAC TTTTTTATTTTTCAG SAK_2088 2079835 - 2079662 - | prophage Sa05, CopG family transcriptional regulator TERM 2710 2079837 - 2079847 + r 71 -6.8 -4.05788 | overlap 2079828 ATTTTTGGACTCATA GGAG TTC CTCC TTTCATTTAAGCCCG TERM 2711 2080014 - 2080055 + r 91 -4.5 -5.99154 | opp_overlap 2080025 TTGTGGGTCGAGCGA TAGCATAGTAACCAAAAAT TGGC GTTGGCGGTTACTGTGCTA TTTTTTTGTTTAGTC SAK_2089 2080975 - 2080337 - | prophage Sa05 BRO domain-containing protein TERM 2712 2080495 - 2080510 + g 76 -7.6 -4.07885 | TCAGTTGTTTAGCAG TCTGTC CTGT GACAGA TTTTAGCAAAAGGTC TERM 2713 2080936 - 2080950 + g 76 -4.3 -5.07971 | AAAAATCAATTTCAA GTTCT CCAAA AGAAC TTTTTACTTGTTTTA TERM 2714 2081192 - 2081205 + r 100 -8.1 -5.85011 | TTTTGTTGTTTTCAC GCGCA TTTT TGCGC TTTTTTTAATTTTTA SAK_2090 2081813 - 2081211 - | prophage Sa05 BRO domain-containing protein TERM 2715 2082298 - 2082278 - g 93 -4 -5.96894 | ACGCAAAGAAAAAAA GCTAACCC AAGAA GAATTAGC TGGGGAGATTGGTGT SAK_2091 2082243 - 2082857 + | prophage Sa05, DNA-binding protein TERM 2716 2083199 - 2083182 - T 73 -7.7 -3.67517 | opp_overlap 2083182, overlap 2083176 2083184 CATTAACATGTCAAA TACGACC ACAT GGTCGCA TTTAGGTTCAAGAGC TERM 2717 2083197 - 2083184 - T 73 -8.1 -3.41302 | opp_overlap 2083182, overlap 2083176 2083182 TTAACATGTCAAATA CGACC ACAT GGTCG CATTTAGGTTCAAGA SAK_2092 2083354 - 2083250 - | hypothetical protein TERM 2718 2084642 - 2084618 - g 100 -10.1 -5.19879 | TCTGAAATAGAAAAA GACCCTCAACA TTT TGTTGAAAGTC TGAAAAAATCTAAAT SAK_2093 2083694 - 2084659 + | hypothetical protein TERM 2719 2085027 - 2085049 + G 73 -9.2 -2.82253 | opp_overlap 2085027, overlap 2085026 AGTAAAAAAGAAAGA TGGTACGGTA ATT TATCGTGCCA GTATTTATCTTGGTA TERM 2720 2085620 - 2085642 + G 70 -2.8 -5.10461 | opp_overlap 2085618 2085616, overlap 2085622 2085624 ATAAATACAGATACT TCTATGAAGT CAC ACTTTATAAA TTTTTATTAGCTACA TERM 2721 2086148 - 2086126 - g 100 -8.5 -5.55698 | GAGAATGCAAAAAAA GCTGTCTCA TTCTT TGAAACAGC AATTAACTCAATATA SAK_2094 2084998 - 2086164 + | prophage Sa05, site-specific recombinase phage integrase family protein TERM 2722 2086255 - 2086224 - T 77 -8.8 -3.66556 | opp_overlap 2086232, overlap 2086211 2086226 2086232 AATGTTTTAAGATAA GACAAAAAGCCCAC TGTT GTAGGCTTTCTGTA AGATATATCTTAAAA TERM 2723 2086253 - 2086226 - T 90 -11.4 -3.41024 | opp_overlap 2086232, overlap 2086211 2086224 2086232 TGTTTTAAGATAAGA CAAAAAGCCCAC TGTT GTAGGCTTTCTG TAAGATATATCTTAA TERM 2724 2086247 - 2086232 - T 88 -6.8 -5.18995 | opp_overlap 2086232, overlap 2086226 2086224 AAGATAAGACAAAAA GCCCAC TGTT GTAGGC TTTCTGTAAGATATA rpsD 2086882 - 2086271 - | 30S ribosomal protein S4 TERM 2725 2087192 - 2087203 + r 72 -5.8 -4.50841 | opp_overlap 2087192, overlap 2087187 TATAGAAACAAAAAA CCTC AGTC GAGG TTTTCATATTATTCT TERM 2726 2087203 - 2087192 - R 95 -5.8 -5.76237 | opp_overlap 2087192 2087187 TATAGAAACAAAAAA CCTC AGTC GAGG TTTTCATATTATTCT SAK_2096 2087499 - 2087212 - | hypothetical protein dnaC 2088866 - 2087511 - | replicative DNA helicase TERM 2727 2088023 - 2088008 - G 83 -9 -4.24745 | TATCATCAATATAAA TTGGCG CATC CGCCAA AGCTCCTTGAGCAAT rplI 2089361 - 2088909 - | 50S ribosomal protein L9 SAK_2099 2091349 - 2089367 - | DHH family protein TERM 2728 2090286 - 2090267 - G 70 -2.8 -5.19212 | overlap 2090268 2090282 ATTACTAGCAAAAAA TTGCATCC CTAC AGATGCAC CTAGTGCATCCATGT TERM 2729 2091405 - 2091385 - R 100 -14 -4.76193 | AATTATAACACAAAA CGCCCCTG ATAAA CAGGGGCG AACACTATTATCAAT gidA 2093317 - 2091416 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA SAK_2101 2094098 - 2093487 - | MarC membrane protein trmU 2095251 - 2094130 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase sdhB 2095497 - 2096165 + | L-serine dehydratase, iron-sulfur-dependent, beta subunit sdhA 2096180 - 2097052 + | L-serine dehydratase, iron-sulfur-dependent, alpha subunit TERM 2730 2097085 - 2097125 + T 100 -20.9 -4.65933 | opp_overlap 2097085 2097095, overlap 2097095 CTCTTTCCCTGAAAA TAAATAAAAACGCTACAGT AAA GCTGTAGCGTTTTTATTTA TTTGTTTTAGCAATC TERM 2731 2097125 - 2097085 - T 100 -20.2 -4.07568 | opp_overlap 2097085 2097095, overlap 2097095 CTCTTTCCCTGAAAA TAAATAAAAACGCTACAG TAAAG CTGTAGCGTTTTTATTTA TTTGTTTTAGCAATC TERM 2732 2097095 - 2097115 + T 100 -11.9 -5.56573 | opp_overlap 2097085 2097095, overlap 2097085 GAAAATAAATAAAAA CGCTACAGT AAA GCTGTAGCG TTTTTATTTATTTGT TERM 2733 2097115 - 2097095 - T 100 -11.2 -5.59962 | opp_overlap 2097095 2097085, overlap 2097085 GAAAATAAATAAAAA CGCTACAG TAAAG CTGTAGCG TTTTTATTTATTTGT SAK_2105 2097864 - 2097187 - | transglycosylase-like domain-containing protein TERM 2734 2097986 - 2097945 - R 76 -6.1 -4.6644 | opp_overlap 2097950 2097954, overlap 2097950 AATAGATGTTAAAAA TATTACAAAGAGATTTAAT TTTA AGTAAATCTCTTTGTTTTA TCAACTTTTATTAAT TERM 2735 2097981 - 2097950 - R 83 -10.4 -3.02233 | opp_overlap 2097950 2097954, overlap 2097945 ATGTTAAAAATATTA CAAAGAGATTTAAT TTTA AGTAAATCTCTTTG TTTTATCAACTTTTA TERM 2736 2097950 - 2097981 + r 95 -10.4 -4.46581 | opp_overlap 2097945 2097950, overlap 2097954 ATGTTAAAAATATTA CAAAGAGATTTAAT TTTA AGTAAATCTCTTTG TTTTATCAACTTTTA TERM 2737 2097954 - 2097977 + r 74 -5.4 -4.77775 | opp_overlap 2097950 2097945, overlap 2097950 TAAAAATATTACAAA GAGATTTAAT TTTA AGTAAATCTC TTTGTTTTATCAACT SAK_2106 2098536 - 2097997 - | LysM domain-containing protein TERM 2738 2098755 - 2098717 - R 71 -6.9 -4.11404 | overlap 2098723 TTCACATTATATAAA TGAAAAGGCTAAGACCA TAAAC TGACCTTAACCTTTTAA TTTTTTAATAGAAAC TERM 2739 2098749 - 2098723 - R 74 -5.9 -4.65153 | overlap 2098717 TTATATAAATGAAAA GGCTAAGACCA TAAAC TGACCTTAACC TTTTAATTTTTTAAT SAK_2107 2099546 - 2098752 - | cobalt ABC transporter, permease protein SAK_2108 2100381 - 2099539 - | cobalt transporter ATP-binding subunit TERM 2740 2100340 - 2100315 - G 73 -5.3 -4.62783 | overlap 2100316 GATTGACGTCAAAAA GGGCACGCCCT TCAA AAGGAGTGCCG GCTTGATAGGTATAA TERM 2741 2100339 - 2100316 - G 73 -8.8 -3.37188 | overlap 2100315 ATTGACGTCAAAAAG GGCACGCCCT TCAA AAGGAGTGCC GGCTTGATAGGTATA SAK_2109 2101196 - 2100357 - | cobalt transporter ATP-binding subunit pgsA 2101738 - 2101196 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase SAK_2111 2103144 - 2101861 - | M16B family peptidase SAK_2112 2104390 - 2103146 - | peptidase M16 inactive domain-containing protein TERM 2742 2104000 - 2104027 + g 73 -8.6 -3.30159 | TAAGGTTTTTCTTCT CAGTATCAAAAA TAGA TGTTTGATACTG TTCTAAAGAAATTAA TERM 2743 2104900 - 2104878 - g 78 -9.2 -3.57808 | opp_overlap 2104876, overlap 2104876 CGTAATGTAGAAATA GCTGAAAAAC AGC GTGTTTCAGC AATCGTTAAAGAAAT SAK_2113 2104629 - 2104982 + | hypothetical protein TERM 2744 2105889 - 2105877 - g 74 -4.1 -5.10461 | opp_overlap 2105878, overlap 2105878 TTGAGCTAATAAAAA CCGTT ACC AACGA TTATCCGATTCTCTT recF 2104985 - 2106094 + | recombination protein F TERM 2745 2106102 - 2106083 - T 100 -10.8 -5.96521 | opp_overlap 2106083 ATTAATGAAAAAAAA GCAACAGA TTAA TCTGTTGC TTTTTAATAAGATTT TERM 2746 2106083 - 2106102 + T 100 -10.8 -4.75404 | opp_overlap 2106083 ATTAATGAAAAAAAA GCAACAGA TTAA TCTGTTGC TTTTTAATAAGATTT SAK_2115 2106972 - 2106106 - | glucose uptake protein SAK_2116 2107690 - 2107028 - | DNA-binding protein TERM 2747 2107723 - 2107759 + r 100 -11.7 -4.29905 | opp_overlap 2107732, overlap 2107724 2107732 TTTGTTTCTTTTATG CAACAAAAAGCATCCTC ATA GGGGATGCTTTTTGTCC TTATTTTAGTGTACT TERM 2748 2107724 - 2107758 + r 100 -15.2 -3.16858 | opp_overlap 2107732, overlap 2107723 2107732 TTGTTTCTTTTATGC AACAAAAAGCATCCTC ATA GGGGATGCTTTTTGTC CTTATTTTAGTGTAC TERM 2749 2107750 - 2107732 - R 95 -8.8 -5.10461 | opp_overlap 2107724 2107723 2107732 TTTATGCAACAAAAA GCATCCTC ATA GGGGATGC TTTTTGTCCTTATTT TERM 2750 2107732 - 2107750 + r 100 -11 -5.05301 | opp_overlap 2107732, overlap 2107724 2107723 TTTATGCAACAAAAA GCATCCTC ATA GGGGATGC TTTTTGTCCTTATTT guaB 2109246 - 2107765 - | inositol-5-monophosphate dehydrogenase SAK_2118 2109888 - 2109403 - | arginine repressor, putative SAK_2119 2110578 - 2109898 - | Crp/FNR family transcriptional regulator SAK_2120 2110786 - 2111490 + | B3/4 domain-containing protein TERM 2751 2111496 - 2111526 + F 100 -11.4 -5.54192 | opp_overlap 2111499 2111505, overlap 2111499 AACGCTATAACATTA AAACGAAAAGTAAA AAT TTTACTTTTCGTTA TTTTTTTAGGTTAAT TERM 2752 2111499 - 2111523 + F 100 -13.1 -4.83715 | opp_overlap 2111499 2111505, overlap 2111496 GCTATAACATTAAAA CGAAAAGTAAA AAT TTTACTTTTCG TTATTTTTTTAGGTT TERM 2753 2111523 - 2111499 - f 100 -13.1 -4.46656 | opp_overlap 2111499 2111496, overlap 2111505 GCTATAACATTAAAA CGAAAAGTAAA AAT TTTACTTTTCG TTATTTTTTTAGGTT arcA 2111757 - 2112989 + | arginine deiminase SAK_2122 2113016 - 2113426 + | acetyltransferase argF 2113442 - 2114455 + | ornithine carbamoyltransferase TERM 2754 2114468 - 2114496 + F 100 -12.6 -4.09685 | opp_overlap 2114465 2114462 2114470 2114490 TAAATTAAACGACTA TAGGGAGTTGAC ATATA GTCAATTCCCTA TTTTAGGAAATGAGG TERM 2755 2114494 - 2114470 - f 71 -8.6 -2.90456 | opp_overlap 2114468, overlap 2114465 2114462 2114490 AATTAAACGACTATA GGGAGTTGAC ATATA GTCAATTCCC TATTTTAGGAAATGA SAK_2124 2114518 - 2115945 + | arginine/ornithine antiporter TERM 2756 2116679 - 2116689 + G 86 -5.4 -5.28166 | overlap 2116681 CATCGTCTTAACTGG CGTT GAC AACG TTTTTGTTAATTTTA arcC 2115966 - 2116922 + | carbamate kinase TERM 2757 2116984 - 2117040 + T 100 -15 -3.55946 | gap 1, opp_overlap 2116995 2117000, overlap 2116986 2116986 2117000 ATGTCACTCCTTAGG CAT-TCCTATAATAAAAGAGAGGTAGA TATA TCTAGCTCTCTTTTATTATAGGACATA TATTATTTAAAATAG TERM 2758 2116986 - 2117037 + T 100 -19.2 -2.60309 | opp_overlap 2116995 2117000, overlap 2116984 2116986 2117000 GTCACTCCTTAGGCA TTCCTATAATAAAAGAGAGGTAGA TATA TCTAGCTCTCTTTTATTATAGGAC ATATATTATTTAAAA TERM 2759 2116986 - 2117038 + T 100 -17.6 -3.35054 | gap 1, opp_overlap 2116995 2117000, overlap 2116986 2116984 2117000 GTCACTCCTTAGGCA T-TCCTATAATAAAAGAGAGGTAGA TATA TCTAGCTCTCTTTTATTATAGGACA TATATTATTTAAAAT TERM 2760 2117028 - 2116995 - T 100 -12.7 -3.31461 | opp_overlap 2116986 2116986 2116984 2117000, overlap 2117000 TAGGCATTCCTATAA TAAAAGAGAGGTAGA TATA TCTAGCTCTCTTTTA TTATAGGACATATAT TERM 2761 2117023 - 2117000 - T 90 -8.2 -4.77567 | opp_overlap 2116986 2116986 2116984 2117000, overlap 2116995 ATTCCTATAATAAAA GAGAGGTAGA TATA TCTAGCTCTC TTTTATTATAGGACA TERM 2762 2117000 - 2117023 + T 90 -8.2 -4.77165 | opp_overlap 2117000 2116995, overlap 2116986 2116986 2116984 ATTCCTATAATAAAA GAGAGGTAGA TATA TCTAGCTCTC TTTTATTATAGGACA trpS 2118068 - 2117043 - | tryptophanyl-tRNA synthetase II SAK_2127 2118868 - 2118176 - | hypothetical protein TERM 2763 2119035 - 2119071 + H 70 -3.8 -4.9934 | overlap 2119034 2119041 AAATAAAAATGTTAT GACTGAGTTGTCAATA TTATT TATTGACAGCTTTCTC TTTTTATCATGTTAT TERM 2764 2119041 - 2119065 + H 85 -8 -4.60808 | overlap 2119034 2119035 AAATGTTATGACTGA GTTGTCAATA TTATT TATTGACAGC TTTCTCTTTTTATCA SAK_2128 2119225 - 2119983 + | hypothetical protein SAK_2129 2120049 - 2121668 + | ABC transporter, ATP-binding protein TERM 2765 2121775 - 2121740 - f 70 -7.1 -3.72241 | gap 1, opp_overlap 2121731 2121746 2121774 TATTAATCATTTAAA TAAAAAGGTTGGAACA AATAG TGT-CCAGCCTTTTTA TCTTAGGAGATATAT TERM 2766 2121746 - 2121769 + F 70 -3.9 -5.0916 | gap 1, opp_overlap 2121740, overlap 2121731 TCATTTAAATAAAAA GGTTGGAACA AATAG TGT-CCAGCC TTTTTATCTTAGGAG SAK_2130 2121791 - 2124370 + | hypothetical protein TERM 2767 2124391 - 2124358 - T 100 -17.1 -5.08011 | opp_overlap 2124363, overlap 2124363 AAAATTTGGAAAAAA TAAAATAGGATGAGA GTAC TCTCATCCTATTTTA TTAACAAAAAAACGC TERM 2768 2124363 - 2124386 + T 100 -12.6 -4.63218 | opp_overlap 2124358 2124363 TTGGAAAAAATAAAA TAGGATGAGA GTAC TCTCATCCTA TTTTATTAACAAAAA TERM 2769 2124386 - 2124363 - T 100 -12.6 -5.42198 | opp_overlap 2124363, overlap 2124358 TTGGAAAAAATAAAA TAGGATGAGA GTAC TCTCATCCTA TTTTATTAACAAAAA TERM 2770 2124419 - 2124404 - T 81 -3.2 -5.84381 | opp_overlap 2124408 TTATTAACAAAAAAA CGCCGA CAAA TCAACG TTTAGATGTGTCTTA TERM 2771 2124533 - 2124523 - T 100 -6.8 -5.72622 | opp_overlap 2124523 CGGATAAATAAAAAA CTGC AAA GCAG TTATCAATAGTCCGT TERM 2772 2124877 - 2124920 + T 100 -13.6 -4.64144 | gap 1, opp_overlap 2124889, overlap 2124889 GAATCCTGCTGGAAT CAGATAATGAAAGCCTAGATA GAT TATCTAGGCTTTT-TTATTTG TTTTTAGCGGTTGTT TERM 2773 2124909 - 2124889 - T 100 -12.7 -4.05848 | opp_overlap 2124877 2124889 AATCAGATAATGAAA GCCTAGATA GAT TATCTAGGC TTTTTTATTTGTTTT TERM 2774 2124889 - 2124909 + T 100 -12.7 -5.88476 | opp_overlap 2124889, overlap 2124877 AATCAGATAATGAAA GCCTAGATA GAT TATCTAGGC TTTTTTATTTGTTTT SAK_2134 2125430 - 2124951 - | SPOUT methyltransferase superfamily protein TERM 2775 2125533 - 2125551 + H 95 -10.4 -4.5187 | opp_overlap 2125531 AACTATAATCAAGGT TATCCACA AGT TGTGGATA TTTCCTTTTTTTAGC htrA 2125631 - 2126860 + | serine peptidase HtrA TERM 2776 2126931 - 2126897 - f 93 -10.1 -4.4296 | opp_overlap 2126902, overlap 2126898 TAAGATATAGTAAAA TTAAAGGGGTTGGTC AGATA GACCAATCCCTTTAG TAAGTCTATAGAATC TERM 2777 2126930 - 2126898 - f 100 -13.6 -3.24691 | opp_overlap 2126902, overlap 2126897 AAGATATAGTAAAAT TAAAGGGGTTGGTC AGATA GACCAATCCCTTTA GTAAGTCTATAGAAT TERM 2778 2126902 - 2126926 + F 100 -12.2 -3.78736 | opp_overlap 2126898 2126897 TATAGTAAAATTAAA GGGGTTGGTC AGATA GACCAATCCC TTTAGTAAGTCTATA TERM 2779 2127600 - 2127582 - g 78 -6.8 -4.67048 | TCACTTCAAAATAAA GATGTCTT TCT AAAACATC AAGAAAATGAGTTAG TERM 2780 2127619 - 2127608 - g 71 -4.4 -4.82518 | opp_overlap 2127608, overlap 2127603 AAAACATCAAGAAAA TGAG TTAG CTCA ATTTCTAGGTAGCAA SAK_2136 2126958 - 2127731 + | ParB family chromosome partioning protein